TaxID_AccNum TaxID short_name full_name description accession_num rhodopsin_clade supercluster cluster subcluster rhodopsin_type putative_activity residues_for_activity putative_function predicted_spectral_tuning NCBI_taxonomy dbxref mol_type strain_only date collection_date isolation_source province Biome_origin latitude longitude title_pub authors_pub journal_pub pubmed_ID note raw_DNA_seq raw_PROT_seq ALIGN_DNA ALIGN_PROT [IV-Alpha8-SAR11/IMCC9063]_DQ422682 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-20m-e11_DQ422682 gi|90024884|gb|DQ422682| Uncultured bacterium clone med-tb04-20m-e11 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-e11 putative proteorhodopsin gene, partial cds. DQ422682 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTACGAAAAGTTGACACAAATATATTCTGGAGAATCTTAATCGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATTAATGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGAAAAAGTTGCTGCTAAATCTGGAAACAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAEKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---CGAAAAGTTGACACA---AATATA------------------------------------TTCTGGAGA---ATCTTAATCGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGAAAAAGTTGCTGCTAAA------TCT---GGAAACAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAEKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422500 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-50m-e4_DQ422500 gi|90024520|gb|DQ422500| Uncultured bacterium clone med-tb04-50m-e4 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-e4 putative proteorhodopsin gene, partial cds. DQ422500 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTACGAAAAGTTGACACAAATATATTCTGGAGAATCTTAATCGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATTAATGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---CGAAAAGTTGACACA---AATATA------------------------------------TTCTGGAGA---ATCTTAATCGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422518 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-50m-g1_DQ422518 gi|90024556|gb|DQ422518| Uncultured bacterium clone med-tb04-50m-g1 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-g1 putative proteorhodopsin gene, partial cds. DQ422518 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTACGAAAAGTTGACACAAATATATTCTGGAGAATCTTAATCGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATTAATGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---CGAAAAGTTGACACA---AATATA------------------------------------TTCTGGAGA---ATCTTAATCGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422669 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-20m-d10_DQ422669 gi|90024858|gb|DQ422669| Uncultured bacterium clone med-tb04-20m-d10 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-d10 putative proteorhodopsin gene, partial cds. DQ422669 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTACGAAAAGTTGACACAAATATATTCTGGAGAATCTTAATCGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATTAATGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---CGAAAAGTTGACACA---AATATA------------------------------------TTCTGGAGA---ATCTTAATCGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422590 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-0m-e12_DQ422590 gi|90024700|gb|DQ422590| Uncultured bacterium clone med-tb04-0m-e12 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-e12 putative proteorhodopsin gene, partial cds. DQ422590 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTACGAAAAGTTGACACAAATATATTCTGGAGAATCTTAATCGGTTCACTAGTTATGTTAATTGGTGGATATCTTGGAGAAGCTGGATTCATTAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTTGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---CGAAAAGTTGACACA---AATATA------------------------------------TTCTGGAGA---ATCTTAATCGGTTCACTAGTTATGTTAATTGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422689 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-20m-e7_DQ422689 gi|90024898|gb|DQ422689| Uncultured bacterium clone med-tb04-20m-e7 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-e7 putative proteorhodopsin gene, partial cds. DQ422689 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTACGAAAAGTTGACACAAATATATTCTGGAGAATCTTAATCGGTTCACTAGTTATGTTAATTGGTGGATATCTTGGAGAAGCTGGATTCATTAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---CGAAAAGTTGACACA---AATATA------------------------------------TTCTGGAGA---ATCTTAATCGGTTCACTAGTTATGTTAATTGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422566 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-0m-c10_DQ422566 gi|90024652|gb|DQ422566| Uncultured bacterium clone med-tb04-0m-c10 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-c10 putative proteorhodopsin gene, partial cds. DQ422566 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTACGAAAAGTTGACACAAATATATTCTGGAGAATCTTAATCGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATTAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAGTCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATTTACCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEVFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---CGAAAAGTTGACACA---AATATA------------------------------------TTCTGGAGA---ATCTTAATCGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAGTC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422713 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-20m-g7_DQ422713 gi|90024946|gb|DQ422713| Uncultured bacterium clone med-tb04-20m-g7 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-g7 putative proteorhodopsin gene, partial cds. DQ422713 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTTAGCAGTACGAAAAGTTGACACAAATATATTCTGGAGAATCTTAATCGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATTAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATTTACCCA RYIDWLITVPLQLVEFYLILLAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTTAGCA---------GTA---CGAAAAGTTGACACA---AATATA------------------------------------TTCTGGAGA---ATCTTAATCGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILLA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422573 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-0m-c6_DQ422573 gi|90024666|gb|DQ422573| Uncultured bacterium clone med-tb04-0m-c6 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-c6 putative proteorhodopsin gene, partial cds. DQ422573 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTACGAAAAGTTGACACAAATATATTCTGGAGAATCTTAATCGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATTAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCCGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGGATGATTGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---CGAAAAGTTGACACA---AATATA------------------------------------TTCTGGAGA---ATCTTAATCGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCCGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGGATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422686 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-20m-e4_DQ422686 gi|90024892|gb|DQ422686| Uncultured bacterium clone med-tb04-20m-e4 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-e4 putative proteorhodopsin gene, partial cds. DQ422686 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTACGAAAAGTTGACACAAATATATTCTGGAGAATCTTAATCGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATTAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCCGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---CGAAAAGTTGACACA---AATATA------------------------------------TTCTGGAGA---ATCTTAATCGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCCGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ203512 [IV-Alpha8-SAR11/IMCC9063] MedHO1202B7_env_samples_DQ203512 gi|77547472|gb|DQ203512| Uncultured bacterium clone MedHO1202B7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202B7 predicted proteorhodopsin gene, partial cds DQ203512 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGTTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTACGAAAAGTTGACACAAATATATTCTGGAGAATCTTAATCGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATTAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCGATATATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------TTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---CGAAAAGTTGACACA---AATATA------------------------------------TTCTGGAGA---ATCTTAATCGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCGATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422318 [IV-Alpha8-SAR11/IMCC9063] clone_med-20m-f7_DQ422318 gi|90024156|gb|DQ422318| Uncultured bacterium clone med-20m-f7 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-f7 putative proteorhodopsin gene, partial cds. DQ422318 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATAACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACAAACATATTCTGGGGAATCTTAATTGGTTCACTAGTTATGTTAATTGGTGGATATCTTGGAGAAGCTGGATTCATTAACGCTACACTGGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAGGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWGILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATAACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACA---AACATA------------------------------------TTCTGGGGA---ATCTTAATTGGTTCACTAGTTATGTTAATTGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTGGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAGGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWG-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422298 [IV-Alpha8-SAR11/IMCC9063] clone_med-20m-e1_DQ422298 gi|90024116|gb|DQ422298| Uncultured bacterium clone med-20m-e1 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-e1 putative proteorhodopsin gene, partial cds. DQ422298 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATAACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTACGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCGCTAGTTATGTTAATTGGTGGATATCTTGGAGAAGCTGGATTCATTAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAGTCTGGAAATAAATCTTTAGTAACTGCGTTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATAACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---CGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCGCTAGTTATGTTAATTGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAG------TCT---GGAAATAAATCTTTA---GTA---ACT---GCG---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422553 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-0m-b1_DQ422553 gi|90024626|gb|DQ422553| Uncultured bacterium clone med-tb04-0m-b1 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-b1 putative proteorhodopsin gene, partial cds. DQ422553 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATAACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCGCTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATTAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTTGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATAACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCGCTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422703 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-20m-f9_DQ422703 gi|90024926|gb|DQ422703| Uncultured bacterium clone med-tb04-20m-f9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-f9 putative proteorhodopsin gene, partial cds. DQ422703 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATAACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTACGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCGCTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATTAACGCTACATTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATATTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATAACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---CGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCGCTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACATTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATA---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ339337 [IV-Alpha8-SAR11/IMCC9063] clone_S-S4OM-A2_DQ339337 gi|85681647|gb|DQ339337| Uncultured bacterium clone S-S4OM-A2 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-A2 predicted proteorhodopsin gene, partial cds. DQ339337 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTACGAAAAGTTGACACAAATATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATTGGTGGATATCTTGGAGAAGCTGGATTCATTAACGCTACACTAGGTTTTATAATTGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCCATATACCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---CGAAAAGTTGACACA---AATATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATTGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTTATAATTGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ339237 [IV-Alpha8-SAR11/IMCC9063] clone_S-SOM-G7_DQ339237 gi|85681451|gb|DQ339237| Uncultured bacterium clone S-SOM-G7 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-G7 predicted proteorhodopsin gene, partial cds. DQ339237 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTACGAAAAGTTGACACAAATATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATTGGTGGATATCTTGGAGAAGCTGGATTCATTAACGCTACACTAGGTTTTATAATTGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCCATTTACCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---CGAAAAGTTGACACA---AATATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATTGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTTATAATTGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ339390 [IV-Alpha8-SAR11/IMCC9063] clone_S-S4OM-F2_DQ339390 gi|85681751|gb|DQ339390| Uncultured bacterium clone S-S4OM-F2 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-F2 predicted proteorhodopsin gene, partial cds. DQ339390 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTACGAAAAGTTGACACAAATATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATTGGTGGATATCTTGGAGAAGCTGGATTCATTAACGCTACACTAGGTTTTATAATTGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCCATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---CGAAAAGTTGACACA---AATATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATTGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTTATAATTGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ339346 [IV-Alpha8-SAR11/IMCC9063] clone_S-S4OM-B12_DQ339346 gi|85681663|gb|DQ339346| Uncultured bacterium clone S-S4OM-B12 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-B12 predicted proteorhodopsin gene, partial cds. DQ339346 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTACGAAAAGTTGACACAAATATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATTGGTGGATATCTTGGAGAAGCTGGATTCATTAACGCTACACTAGGTTTTATAATTGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCCATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---CGAAAAGTTGACACA---AATATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATTGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTTATAATTGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ339413 [IV-Alpha8-SAR11/IMCC9063] clone_S-S4OM-H5_DQ339413 gi|85681797|gb|DQ339413| Uncultured bacterium clone S-S4OM-H5 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-H5 predicted proteorhodopsin gene, partial cds. DQ339413 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTACGAAAAGTTGACACAAATATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATTGGTGGATATCTTGGAGAAGCTGGATTCATTAACGCTACACTAGGTTTTATAATTGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCCATCTACCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---CGAAAAGTTGACACA---AATATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATTGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTTATAATTGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ339194 [IV-Alpha8-SAR11/IMCC9063] clone_S-SOM-D11_DQ339194 gi|85681365|gb|DQ339194| Uncultured bacterium clone S-SOM-D11 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-D11 predicted proteorhodopsin gene, partial cds. DQ339194 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTACGAAAAGTTGACACAAATATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATTGGTGGATATCTTGGAGAAGCTGGATTCATTAACGCTACACTAGGTTTTATAATTGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCCATATACCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---CGAAAAGTTGACACA---AATATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATTGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTTATAATTGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ339414 [IV-Alpha8-SAR11/IMCC9063] clone_S-S4OM-H6_DQ339414 gi|85681799|gb|DQ339414| Uncultured bacterium clone S-S4OM-H6 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-H6 predicted proteorhodopsin gene, partial cds. DQ339414 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTACGAAAAGTTGACACAAATATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATTGGTGGATATCTTGGAGAAGCTGGATTCATTAACGCTACACTAGGTTTTATAATTGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGGTGGGCCATATACCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---CGAAAAGTTGACACA---AATATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATTGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTTATAATTGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGGTGG---------GCCATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ203745 [IV-Alpha8-SAR11/IMCC9063] SS114a0A9_env_samples_DQ203745 gi|77547938|gb|DQ203745| Uncultured bacterium clone SS114a0A9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0A9 predicted proteorhodopsin gene, partial cds DQ203745 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTACATCGATTGGTTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTACGAAAAGTTGACACCAACATATTCTGGAGAATCTTAATTGGTTCACTAGTAATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATTAATGCTACACTAGGTTTCATAATCGGTATGGCAGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAGGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAGTCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCCATATACCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATCGATTGG------------------------TTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---CGAAAAGTTGACACC---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTAATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATAATCGGTATGGCAGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAGGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAGTCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ203547 [IV-Alpha8-SAR11/IMCC9063] MedHO1202E8_env_samples_DQ203547 gi|77547542|gb|DQ203547| Uncultured bacterium clone MedHO1202E8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202E8 predicted proteorhodopsin gene, partial cds DQ203547 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATCGATTGGTTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTACGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATTAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCCATTTACCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATCGATTGG------------------------TTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---CGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ339334 [IV-Alpha8-SAR11/IMCC9063] clone_S-S4OM-A1_DQ339334 gi|85681641|gb|DQ339334| Uncultured bacterium clone S-S4OM-A1 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-A1 predicted proteorhodopsin gene, partial cds. DQ339334 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTACGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATTAATGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGGTGGGCGATTTACCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---CGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGGTGG---------GCGATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422644 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-20m-b1_DQ422644 gi|90024808|gb|DQ422644| Uncultured bacterium clone med-tb04-20m-b1 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-b1 putative proteorhodopsin gene, partial cds. DQ422644 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATCACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTACGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATTGGTGGATATCTTGGAGAAGCTGGATTCATTAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATCTACCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATCACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---CGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATTGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422668 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-20m-d1_DQ422668 gi|90024856|gb|DQ422668| Uncultured bacterium clone med-tb04-20m-d1 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-d1 putative proteorhodopsin gene, partial cds. DQ422668 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATCACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTACGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATTAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATCACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---CGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422677 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-20m-d7_DQ422677 gi|90024874|gb|DQ422677| Uncultured bacterium clone med-tb04-20m-d7 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-d7 putative proteorhodopsin gene, partial cds. DQ422677 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTACGAAAAGTTGACACAAACATATTCCGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATTAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATTTCTCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFRRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAISP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---CGAAAAGTTGACACA---AACATA------------------------------------TTCCGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTCTCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FRR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AISP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422557 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-0m-b2_DQ422557 gi|90024634|gb|DQ422557| Uncultured bacterium clone med-tb04-0m-b2 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-b2 putative proteorhodopsin gene, partial cds. DQ422557 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTACGAAAAGTTGACACGAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---CGAAAAGTTGACACG---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422601 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-0m-f11_DQ422601 gi|90024722|gb|DQ422601| Uncultured bacterium clone med-tb04-0m-f11 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-f11 putative proteorhodopsin gene, partial cds. DQ422601 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTACGAAAAGTTGACACGAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---CGAAAAGTTGACACG---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422630 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-0m-h6_DQ422630 gi|90024780|gb|DQ422630| Uncultured bacterium clone med-tb04-0m-h6 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-h6 putative proteorhodopsin gene, partial cds. DQ422630 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTACGAAAAGTTGACACGAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---CGAAAAGTTGACACG---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926090 [IV-Alpha8-SAR11/IMCC9063] BOUM_OTU003_env_samples gb|KJ926090| Uncultured bacterium clone BOUM OTU003 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU003 putative proteorhodopsin gene, partial cds KJ926090 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other #na 2008 #na Mediterranean Sea marine 33.709667 32.644667 #na #na #na #na #na GTTGATTGGTTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACGAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACAGTAGGTTGGGCTATTTAT VDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGATTGG------------------------TTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACG---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ203662 [IV-Alpha8-SAR11/IMCC9063] medHO155A11_env_samples_DQ203662 gi|77547772|gb|DQ203662| Uncultured bacterium clone medHO155A11 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155A11 predicted proteorhodopsin gene, partial cds DQ203662 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGTTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTACGAAAAGTTGACACGAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACAGTAGGTTGGGCAATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------TTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---CGAAAAGTTGACACG---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ203764 [IV-Alpha8-SAR11/IMCC9063] SS114a0D7_env_samples_DQ203764 gi|77547976|gb|DQ203764| Uncultured bacterium clone SS114a0D7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0D7 predicted proteorhodopsin gene, partial cds DQ203764 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATACATTGACTGGTTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCGGTACGAAAAGTTGACACCAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCAATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATTGACTGG------------------------TTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCG---------GTA---CGAAAAGTTGACACC---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422281 [IV-Alpha8-SAR11/IMCC9063] clone_med-20m-c5_DQ422281 gi|90024082|gb|DQ422281| Uncultured bacterium clone med-20m-c5 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-c5 putative proteorhodopsin gene, partial cds. DQ422281 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATTAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAGATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAGATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422360 [IV-Alpha8-SAR11/IMCC9063] clone_med-50m-a5_DQ422360 gi|90024240|gb|DQ422360| Uncultured bacterium clone med-50m-a5 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-a5 putative proteorhodopsin gene, partial cds. DQ422360 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAGATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAGATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422423 [IV-Alpha8-SAR11/IMCC9063] clone_med-50m-f9_DQ422423 gi|90024366|gb|DQ422423| Uncultured bacterium clone med-50m-f9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-f9 putative proteorhodopsin gene, partial cds. DQ422423 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAGATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAGATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422712 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-20m-g6_DQ422712 gi|90024944|gb|DQ422712| Uncultured bacterium clone med-tb04-20m-g6 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-g6 putative proteorhodopsin gene, partial cds. DQ422712 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAGATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAGATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422387 [IV-Alpha8-SAR11/IMCC9063] clone_med-50m-c8_DQ422387 gi|90024294|gb|DQ422387| Uncultured bacterium clone med-50m-c8 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-c8 putative proteorhodopsin gene, partial cds. DQ422387 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAGATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAGATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422311 [IV-Alpha8-SAR11/IMCC9063] clone_med-20m-f11_DQ422311 gi|90024142|gb|DQ422311| Uncultured bacterium clone med-20m-f11 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-f11 putative proteorhodopsin gene, partial cds. DQ422311 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAGATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAGATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422350 [IV-Alpha8-SAR11/IMCC9063] clone_50-6_DQ422350 gi|90024220|gb|DQ422350| Uncultured bacterium clone 50-6 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 50-6 putative proteorhodopsin gene, partial cds. DQ422350 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTACGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAGATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTGACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATTTACCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---CGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAGATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTG---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ203682 [IV-Alpha8-SAR11/IMCC9063] medHO155C11_env_samples_DQ203682 gi|77547812|gb|DQ203682| Uncultured bacterium clone medHO155C11 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155C11 predicted proteorhodopsin gene, partial cds DQ203682 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAGATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCCATTTACCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAGATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422441 [IV-Alpha8-SAR11/IMCC9063] clone_med-50m-h3_DQ422441 gi|90024402|gb|DQ422441| Uncultured bacterium clone med-50m-h3 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-h3 putative proteorhodopsin gene, partial cds. DQ422441 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTAATTACTGTACCGCTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAGATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATTTACCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACTGTACCGCTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAGATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422550 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-0m-a7_DQ422550 gi|90024620|gb|DQ422550| Uncultured bacterium clone med-tb04-0m-a7 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-a7 putative proteorhodopsin gene, partial cds. DQ422550 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAGATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATTTACCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAGATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ203543 [IV-Alpha8-SAR11/IMCC9063] MedHO1202E4_env_samples_DQ203543 gi|77547534|gb|DQ203543| Uncultured bacterium clone MedHO1202E4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202E4 predicted proteorhodopsin gene, partial cds DQ203543 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATTAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAGATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCCATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAGATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422678 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-20m-d8_DQ422678 gi|90024876|gb|DQ422678| Uncultured bacterium clone med-tb04-20m-d8 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-d8 putative proteorhodopsin gene, partial cds. DQ422678 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATTGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAGATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAGATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422401 [IV-Alpha8-SAR11/IMCC9063] clone_med-50m-e1_DQ422401 gi|90024322|gb|DQ422401| Uncultured bacterium clone med-50m-e1 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-e1 putative proteorhodopsin gene, partial cds. DQ422401 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAGATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAGATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422388 [IV-Alpha8-SAR11/IMCC9063] clone_med-50m-c9_DQ422388 gi|90024296|gb|DQ422388| Uncultured bacterium clone med-50m-c9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-c9 putative proteorhodopsin gene, partial cds. DQ422388 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAGATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAGATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ203781 [IV-Alpha8-SAR11/IMCC9063] SS114a0F9_env_samples_DQ203781 gi|77548010|gb|DQ203781| Uncultured bacterium clone SS114a0F9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0F9 predicted proteorhodopsin gene, partial cds DQ203781 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATACATTGACTGGTTAATTACTGTACCGCTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAAGCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCCATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKALVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATTGACTGG------------------------TTAATTACTGTACCGCTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAAGCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKAL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ339335 [IV-Alpha8-SAR11/IMCC9063] clone_S-S4OM-A10_DQ339335 gi|85681643|gb|DQ339335| Uncultured bacterium clone S-S4OM-A10 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-A10 predicted proteorhodopsin gene, partial cds. DQ339335 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCAGGATTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTACGAAATCTTTTCAGGTGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCCATCTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCA------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTACGAAATC---------------TTT------TCA---GGTGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ339170 [IV-Alpha8-SAR11/IMCC9063] clone_S-SOM-B10_DQ339170 gi|85681317|gb|DQ339170| Uncultured bacterium clone S-SOM-B10 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-B10 predicted proteorhodopsin gene, partial cds. DQ339170 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCAGGATTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTACGAAATCTTTTCAGGTGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCCATCTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCA------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTACGAAATC---------------TTT------TCA---GGTGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ339193 [IV-Alpha8-SAR11/IMCC9063] clone_S-SOM-D10_DQ339193 gi|85681363|gb|DQ339193| Uncultured bacterium clone S-SOM-D10 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-D10 predicted proteorhodopsin gene, partial cds. DQ339193 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCAGGATTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTACGAAATCTTTTCAGGTGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGGTGGGCCATCTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCA------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTACGAAATC---------------TTT------TCA---GGTGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ203814 [IV-Alpha8-SAR11/IMCC9063] SS114a40C8_env_samples_DQ203814 gi|77548076|gb|DQ203814| Uncultured bacterium clone SS114a40C8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40C8 predicted proteorhodopsin gene, partial cds DQ203814 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCAGGATTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTACGAAATCTTTTCAGGTGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCCATCTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCA------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTACGAAATC---------------TTT------TCA---GGTGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ339356 [IV-Alpha8-SAR11/IMCC9063] clone_S-S4OM-C11_DQ339356 gi|85681683|gb|DQ339356| Uncultured bacterium clone S-S4OM-C11 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-C11 predicted proteorhodopsin gene, partial cds. DQ339356 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCAGGATTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTACGAAATCTTTTCAGGTGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCCATCTACCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCA------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTACGAAATC---------------TTT------TCA---GGTGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ339381 [IV-Alpha8-SAR11/IMCC9063] clone_S-S4OM-E5_DQ339381 gi|85681733|gb|DQ339381| Uncultured bacterium clone S-S4OM-E5 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-E5 predicted proteorhodopsin gene, partial cds. DQ339381 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCAGGATTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTACGAAATCTTTTCAGGTGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGGTGGGCCATCTACCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCA------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTACGAAATC---------------TTT------TCA---GGTGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGGTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ339315 [IV-Alpha8-SAR11/IMCC9063] clone_S-S80M-G11_DQ339315 gi|85681603|gb|DQ339315| Uncultured bacterium clone S-S80M-G11 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-G11 predicted proteorhodopsin gene, partial cds. DQ339315 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCAGGATTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTACGAAATCTTTTCAGGTGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCCATCTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCA------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTACGAAATC---------------TTT------TCA---GGTGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ339177 [IV-Alpha8-SAR11/IMCC9063] clone_S-SOM-B6_DQ339177 gi|85681331|gb|DQ339177| Uncultured bacterium clone S-SOM-B6 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-B6 predicted proteorhodopsin gene, partial cds. DQ339177 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCAGGATTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTACGAAATCTTTTCAGGTGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCCATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCA------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTACGAAATC---------------TTT------TCA---GGTGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ339235 [IV-Alpha8-SAR11/IMCC9063] clone_S-SOM-G5_DQ339235 gi|85681447|gb|DQ339235| Uncultured bacterium clone S-SOM-G5 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-G5 predicted proteorhodopsin gene, partial cds. DQ339235 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCAGGATTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTACGAAATCTTTTCAGGTGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCCATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCA------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTACGAAATC---------------TTT------TCA---GGTGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ339236 [IV-Alpha8-SAR11/IMCC9063] clone_S-SOM-G6_DQ339236 gi|85681449|gb|DQ339236| Uncultured bacterium clone S-SOM-G6 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-G6 predicted proteorhodopsin gene, partial cds. DQ339236 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCAGGATTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTACGAAATCTTTTCAGGTGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGGTGGGCCATATATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCA------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTACGAAATC---------------TTT------TCA---GGTGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422627 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-0m-h3_DQ422627 gi|90024774|gb|DQ422627| Uncultured bacterium clone med-tb04-0m-h3 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-h3 putative proteorhodopsin gene, partial cds. DQ422627 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACCAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCAGGATTCATCAATGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACC---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCA------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422665 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-20m-c7_DQ422665 gi|90024850|gb|DQ422665| Uncultured bacterium clone med-tb04-20m-c7 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-c7 putative proteorhodopsin gene, partial cds. DQ422665 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACCAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCAGGATTCATCAATGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATATATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACC---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCA------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422560 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-0m-b5_DQ422560 gi|90024640|gb|DQ422560| Uncultured bacterium clone med-tb04-0m-b5 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-b5 putative proteorhodopsin gene, partial cds. DQ422560 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGCTACATAGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACCAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCAGGATTCATCAATGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATTTACCCA SYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATAGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACC---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCA------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422684 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-20m-e2_DQ422684 gi|90024888|gb|DQ422684| Uncultured bacterium clone med-tb04-20m-e2 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-e2 putative proteorhodopsin gene, partial cds. DQ422684 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACCAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCAGGATTCATCAATGCTACACTAGGTTTCATAACCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFITGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACC---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCA------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATAACCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FITGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422476 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-50m-c4_DQ422476 gi|90024472|gb|DQ422476| Uncultured bacterium clone med-tb04-50m-c4 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-c4 putative proteorhodopsin gene, partial cds. DQ422476 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACCAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCAGGATTCATCAATGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCGATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACC---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCA------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCGATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422604 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-0m-f3_DQ422604 gi|90024728|gb|DQ422604| Uncultured bacterium clone med-tb04-0m-f3 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-f3 putative proteorhodopsin gene, partial cds. DQ422604 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACCAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCAGGATTCATCAATGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACC---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCA------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422598 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-0m-e9_DQ422598 gi|90024716|gb|DQ422598| Uncultured bacterium clone med-tb04-0m-e9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-e9 putative proteorhodopsin gene, partial cds. DQ422598 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACCAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCAGGATTCATCAATGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACC---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCA------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422641 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-20m-a7_DQ422641 gi|90024802|gb|DQ422641| Uncultured bacterium clone med-tb04-20m-a7 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-a7 putative proteorhodopsin gene, partial cds. DQ422641 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACCAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCAGGATTCATCAATGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACC---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCA------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422466 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-50m-b6_DQ422466 gi|90024452|gb|DQ422466| Uncultured bacterium clone med-tb04-50m-b6 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-b6 putative proteorhodopsin gene, partial cds. DQ422466 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATTGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACCAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCAGGATTCATCAATGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACC---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCA------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ203435 [IV-Alpha8-SAR11/IMCC9063] medHO10A12_env_samples_DQ203435 gi|77547318|gb|DQ203435| Uncultured bacterium clone medHO10A12 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10A12 predicted proteorhodopsin gene, partial cds DQ203435 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGTTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACCAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCAGGATTCATCAATGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCCATTTACCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------TTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACC---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCA------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ339255 [IV-Alpha8-SAR11/IMCC9063] clone_S-S80M-A5_DQ339255 gi|85681485|gb|DQ339255| Uncultured bacterium clone S-S80M-A5 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-A5 predicted proteorhodopsin gene, partial cds. DQ339255 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCATTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCCATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCATTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422624 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-0m-h10_DQ422624 gi|90024768|gb|DQ422624| Uncultured bacterium clone med-tb04-0m-h10 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-h10 putative proteorhodopsin gene, partial cds. DQ422624 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAACAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAACAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422623 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-0m-h1_DQ422623 gi|90024766|gb|DQ422623| Uncultured bacterium clone med-tb04-0m-h1 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-h1 putative proteorhodopsin gene, partial cds. DQ422623 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAACAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAACAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422489 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-50m-d5_DQ422489 gi|90024498|gb|DQ422489| Uncultured bacterium clone med-tb04-50m-d5 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-d5 putative proteorhodopsin gene, partial cds. DQ422489 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACGAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATTGGTGGATATCTTGGAGAAGCTGGATTCATTAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACG---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATTGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422602 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-0m-f12_DQ422602 gi|90024724|gb|DQ422602| Uncultured bacterium clone med-tb04-0m-f12 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-f12 putative proteorhodopsin gene, partial cds. DQ422602 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATTGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCAGGATTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTGGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCA------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTG---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422620 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-0m-g7_DQ422620 gi|90024760|gb|DQ422620| Uncultured bacterium clone med-tb04-0m-g7 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-g7 putative proteorhodopsin gene, partial cds. DQ422620 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCAGGATTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTGGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCA------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTG---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422619 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-0m-g6_DQ422619 gi|90024758|gb|DQ422619| Uncultured bacterium clone med-tb04-0m-g6 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-g6 putative proteorhodopsin gene, partial cds. DQ422619 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCAGGATTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTGGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCA------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTG---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422613 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-0m-g11_DQ422613 gi|90024746|gb|DQ422613| Uncultured bacterium clone med-tb04-0m-g11 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-g11 putative proteorhodopsin gene, partial cds. DQ422613 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACGAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCAGGATTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTGGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACG---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCA------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTG---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422554 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-0m-b10_DQ422554 gi|90024628|gb|DQ422554| Uncultured bacterium clone med-tb04-0m-b10 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-b10 putative proteorhodopsin gene, partial cds. DQ422554 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCAGGATTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCA------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422610 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-0m-f9_DQ422610 gi|90024740|gb|DQ422610| Uncultured bacterium clone med-tb04-0m-f9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-f9 putative proteorhodopsin gene, partial cds. DQ422610 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCAGGATTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGTGAAGCAGGAAAAGTTGCTGCTAAGTCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCA------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGTGAAGCAGGAAAAGTTGCTGCTAAG------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422715 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-20m-g9_DQ422715 gi|90024950|gb|DQ422715| Uncultured bacterium clone med-tb04-20m-g9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-g9 putative proteorhodopsin gene, partial cds. DQ422715 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCAGGATTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGTGAAGCAGGAAAAGTTGCTGCTAAGTCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATTTACCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCA------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGTGAAGCAGGAAAAGTTGCTGCTAAG------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422691 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-20m-e9_DQ422691 gi|90024902|gb|DQ422691| Uncultured bacterium clone med-tb04-20m-e9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-e9 putative proteorhodopsin gene, partial cds. DQ422691 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTCATGTTAATAGGTGGATATCTTGGAGAAGCAGGCTTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAGGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTCATGTTAATAGGTGGATATCTTGGAGAA---------GCA------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAGGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422636 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-20m-a2_DQ422636 gi|90024792|gb|DQ422636| Uncultured bacterium clone med-tb04-20m-a2 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-a2 putative proteorhodopsin gene, partial cds. DQ422636 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACAGTTCCTTTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACAGCGGCATTTTCTGGAGAATCTTTATTGGTTCTTTAGTAATGTTAGTTGGTGGATATCTAGGAGAAGCTGGATTCATTAATGCTACACTTGGTTTTATTATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGTGAAGCGGGCAAAGCTGCAGCTAAATCTGGGAACAAATCTTTAGTAACTGCATTCGGCGCATTAAGAATGATCGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDSGIFWRIFIGSLVMLVGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKAAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTTCCTTTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACAGC---GGCATT------------------------------------TTCTGGAGA---ATCTTTATTGGTTCTTTAGTAATGTTAGTTGGTGGATATCTAGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTATTATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGTGAAGCGGGCAAAGCTGCAGCTAAA------TCT---GGGAACAAATCTTTA---GTA---ACT---GCA---TTC---GGC---GCATTA---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDS-GI------------FWR-IFIGSLVMLVGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422527 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-50m-g7_DQ422527 gi|90024574|gb|DQ422527| Uncultured bacterium clone med-tb04-50m-g7 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-g7 putative proteorhodopsin gene, partial cds. DQ422527 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACAGTTCCTTTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACAGCGGCATATTCTGGAGAATCTTTATTGGTTCTTTAGTTATGTTAGTAGGTGGATATCTTGGAGAAGCTGGATTCATTAATGCTACACTTGGATTTATTATAGGTATAGCTGGATGGGTTTACATTCTTTATGAAATCTTTTCAGGTGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAACAAATCTTTAGTAACTGCATTTGGAGCATTAAGAATGATCGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVRKVDSGIFWRIFIGSLVMLVGGYLGEAGFINATLGFIIGIAGWVYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTTCCTTTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACAGC---GGCATA------------------------------------TTCTGGAGA---ATCTTTATTGGTTCTTTAGTTATGTTAGTAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGA---TTTATTATAGGTATAGCTGGATGGGTTTACATTCTTTATGAAATC---------------TTT------TCA---GGTGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAACAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCATTA---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-RKVDS-GI------------FWR-IFIGSLVMLVGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGIAGWVYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ339309 [IV-Alpha8-SAR11/IMCC9063] clone_S-S80M-F6_DQ339309 gi|85681591|gb|DQ339309| Uncultured bacterium clone S-S80M-F6 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-F6 predicted proteorhodopsin gene, partial cds. DQ339309 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATTACTGTACCTTTACAGCTAATAGAATTTTATTTAATTCTTTCAGCAGTAAGAAAAGTTGACAGTGGCATTTTCTGGAGAATCTTAATTGGTTCTTTAGTGATGTTAGTAGGTGGATATCTAGGAGAAGCAGGATTCATCAACCCTATGCTTGGATTTATTATCGGTATAGCTGGATGGGTTTACATTCTTTATGAAATCTTTTCAGGTGAAGCAGGTACAGCCGTTGCTAAATCTGGAAACAAATCACTTGTAACAGCATTTGGCGCTTTAAGAATGATTGTTACAGTTGGTTGGGCCATTTATCCA RYIDWLITVPLQLIEFYLILSAVRKVDSGIFWRILIGSLVMLVGGYLGEAGFINPMLGFIIGIAGWVYILYEIFSGEAGTAVAKSGNKSLVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTACCTTTACAGCTAATAGAATTTTATTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACAGT---GGCATT------------------------------------TTCTGGAGA---ATCTTAATTGGTTCTTTAGTGATGTTAGTAGGTGGATATCTAGGAGAA---------GCA------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACCCT------------------ATGCTTGGA---TTTATTATCGGTATAGCTGGATGGGTTTACATTCTTTATGAAATC---------------TTT------TCA---GGTGAAGCAGGTACAGCCGTTGCTAAA------TCT---GGAAACAAATCACTT---GTA---ACA---GCA---TTT---GGC---GCTTTA---AGAATGATTGTTACAGTT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLIEFYLILSA---V-RKVDS-GI------------FWR-ILIGSLVMLVGGYLGE---A------G--F-----------I----------------------NP------MLG-FIIGIAGWVYILYEI-----F--S-GEAGTAVAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422384 [IV-Alpha8-SAR11/IMCC9063] clone_med-50m-c5_DQ422384 gi|90024288|gb|DQ422384| Uncultured bacterium clone med-50m-c5 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-c5 putative proteorhodopsin gene, partial cds. DQ422384 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTAATTACTGTGCCTTTACAGCTAATAGAATTTTATTTAATTCTAGCAGCAGTTAAAAAAGTATCTACAGGAATATTCTGGAGAATCTTAATTGGTTCTATAGTAATGTTAGTAGGTGGATACCTTGGAGAAGCTGGATTCATCAACCCTATGCTTGGTTTCATTATAGGTATAGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCTGGAAAAGTTGTTTCTAAATCTGGAAATAAATCTTTAGTTACAGCATTCAGCGCTTTAAGAATGATCGTTACTGTTGGTTGGGCTATTTATCCA RYIDWLITVPLQLIEFYLILAAVKKVSTGIFWRILIGSIVMLVGGYLGEAGFINPMLGFIIGIAGWIYILYEIFSGEAGKVVSKSGNKSLVTAFSALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACTGTGCCTTTACAGCTAATAGAATTTTATTTAATTCTAGCAGCA---------GTT---AAAAAAGTATCTACA---GGAATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCTATAGTAATGTTAGTAGGTGGATACCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACCCT------------------ATGCTTGGT---TTCATTATAGGTATAGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCTGGAAAAGTTGTTTCTAAA------TCT---GGAAATAAATCTTTA---GTT---ACA---GCA---TTC---AGC---GCTTTA---AGAATGATCGTTACTGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLIEFYLILAA---V-KKVST-GI------------FWR-ILIGSIVMLVGGYLGE---A------G--F-----------I----------------------NP------MLG-FIIGIAGWIYILYEI-----F--S-GEAGKVVSK--S-GNKSL-V-T-A-F-S-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422607 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-0m-f6_DQ422607 gi|90024734|gb|DQ422607| Uncultured bacterium clone med-tb04-0m-f6 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-f6 putative proteorhodopsin gene, partial cds. DQ422607 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATTGACTGGCTAATTACTGTGCCTTTACAGCTAATAGAATTTTATTTAATTCTAGCAGCAGTTAAAAAAGTATCTACAGGAATATTCTGGAGAATCTTAATTGGTTCTATAGTAATGTTAGTAGGTGGATACCTTGGAGAAGCTGGATTCATCAACCCTATGCTTGGTTTCATTATAGGTATAGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCTGGAAAAGTTGTTTCTAAATCTGGAAATAAATCTTTAGTTACAGCATTCAGCGCTTTAAGAATGATCGTTACTGTTGATTGGGCTATTTATCCA RYIDWLITVPLQLIEFYLILAAVKKVSTGIFWRILIGSIVMLVGGYLGEAGFINPMLGFIIGIAGWIYILYEIFSGEAGKVVSKSGNKSLVTAFSALRMIVTVDWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACTGTGCCTTTACAGCTAATAGAATTTTATTTAATTCTAGCAGCA---------GTT---AAAAAAGTATCTACA---GGAATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCTATAGTAATGTTAGTAGGTGGATACCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACCCT------------------ATGCTTGGT---TTCATTATAGGTATAGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCTGGAAAAGTTGTTTCTAAA------TCT---GGAAATAAATCTTTA---GTT---ACA---GCA---TTC---AGC---GCTTTA---AGAATGATCGTTACTGTT---------------------------------------------------------------GATTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLIEFYLILAA---V-KKVST-GI------------FWR-ILIGSIVMLVGGYLGE---A------G--F-----------I----------------------NP------MLG-FIIGIAGWIYILYEI-----F--S-GEAGKVVSK--S-GNKSL-V-T-A-F-S-AL-RMIVTV---------------------DW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422509 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-50m-f12_DQ422509 gi|90024538|gb|DQ422509| Uncultured bacterium clone med-tb04-50m-f12 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-f12 putative proteorhodopsin gene, partial cds. DQ422509 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATTGACTGGCTAATTACTGTGCCTTTACAGCTAATAGAATTTTATTTAATTCTAGCAGCAGTTAAAAAAGTATCTACAGGAATATTCTGGAGAATCTTAATTGGTTCTATAGTAATGTTAGTAGGTGGATACCTTGGAGAAGCTGGATTCATCAACCCTATGCTTGGTTTCATTATAGGTATAGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCTGGAAAAGTTGTTTCTAAATCTGGAAATAAATCTTTAGTTACAGCATTCAGCGCTTTAAGAATGATCGTTACTGTTGGTTGGGCTATTTATCCA RYIDWLITVPLQLIEFYLILAAVKKVSTGIFWRILIGSIVMLVGGYLGEAGFINPMLGFIIGIAGWIYILYEIFSGEAGKVVSKSGNKSLVTAFSALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACTGTGCCTTTACAGCTAATAGAATTTTATTTAATTCTAGCAGCA---------GTT---AAAAAAGTATCTACA---GGAATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCTATAGTAATGTTAGTAGGTGGATACCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACCCT------------------ATGCTTGGT---TTCATTATAGGTATAGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCTGGAAAAGTTGTTTCTAAA------TCT---GGAAATAAATCTTTA---GTT---ACA---GCA---TTC---AGC---GCTTTA---AGAATGATCGTTACTGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLIEFYLILAA---V-KKVST-GI------------FWR-ILIGSIVMLVGGYLGE---A------G--F-----------I----------------------NP------MLG-FIIGIAGWIYILYEI-----F--S-GEAGKVVSK--S-GNKSL-V-T-A-F-S-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422670 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-20m-d11_DQ422670 gi|90024860|gb|DQ422670| Uncultured bacterium clone med-tb04-20m-d11 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-d11 putative proteorhodopsin gene, partial cds. DQ422670 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTGCCTTTACAGCTAATAGAATTTTATTTAATTCTAGCAGCAGTTAAAAAAGTATCTACAGGAATATTCTGGAGAATCTTAATTGGTTCTATAGTAATGTTAGTAGGTGGATACCTTGGAGAAGCTGGATTCATCAACCCTATGCTTGGTTTCATTATAGGTATAGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCTGGAAAAGTTGTTTCTAAATCTGGAAATAAATCTTTAGTTACAGCATTCAGCGCTTTAAGAATGATCGTTACTGTTGGTTGGGCTATTTATCCA RYIDWLITVPLQLIEFYLILAAVKKVSTGIFWRILIGSIVMLVGGYLGEAGFINPMLGFIIGIAGWIYILYEIFSGEAGKVVSKSGNKSLVTAFSALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTGCCTTTACAGCTAATAGAATTTTATTTAATTCTAGCAGCA---------GTT---AAAAAAGTATCTACA---GGAATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCTATAGTAATGTTAGTAGGTGGATACCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACCCT------------------ATGCTTGGT---TTCATTATAGGTATAGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCTGGAAAAGTTGTTTCTAAA------TCT---GGAAATAAATCTTTA---GTT---ACA---GCA---TTC---AGC---GCTTTA---AGAATGATCGTTACTGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLIEFYLILAA---V-KKVST-GI------------FWR-ILIGSIVMLVGGYLGE---A------G--F-----------I----------------------NP------MLG-FIIGIAGWIYILYEI-----F--S-GEAGKVVSK--S-GNKSL-V-T-A-F-S-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422726 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-20m-h9_DQ422726 gi|90024972|gb|DQ422726| Uncultured bacterium clone med-tb04-20m-h9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-h9 putative proteorhodopsin gene, partial cds. DQ422726 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTGCCTTTACAGCTAATAGAATTTTATTTAATTCTAGCAGCAGTTAAAAAAGTATCTACAGGAATATTCTGGAGAATCTTAATTGGTTCTATAGTAATGTTAGTAGGTGGATACCTTGGAGAAGCTGGATTCATCAACCCTATGCTTGGTTTCATTATAGGTATAGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCTGGAAAAGTTGTTTCTAAATCTGGAAATAAATCTTTAGTTACAGCATTCAGCGCTTTAAGAATGATCGTTACTGTTGGTTGGGCTATCTATCCA RYIDWLITVPLQLIEFYLILAAVKKVSTGIFWRILIGSIVMLVGGYLGEAGFINPMLGFIIGIAGWIYILYEIFSGEAGKVVSKSGNKSLVTAFSALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTGCCTTTACAGCTAATAGAATTTTATTTAATTCTAGCAGCA---------GTT---AAAAAAGTATCTACA---GGAATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCTATAGTAATGTTAGTAGGTGGATACCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACCCT------------------ATGCTTGGT---TTCATTATAGGTATAGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCTGGAAAAGTTGTTTCTAAA------TCT---GGAAATAAATCTTTA---GTT---ACA---GCA---TTC---AGC---GCTTTA---AGAATGATCGTTACTGTT---------------------------------------------------------------GGTTGG---------GCTATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLIEFYLILAA---V-KKVST-GI------------FWR-ILIGSIVMLVGGYLGE---A------G--F-----------I----------------------NP------MLG-FIIGIAGWIYILYEI-----F--S-GEAGKVVSK--S-GNKSL-V-T-A-F-S-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422368 [IV-Alpha8-SAR11/IMCC9063] clone_med-50m-b12_DQ422368 gi|90024256|gb|DQ422368| Uncultured bacterium clone med-50m-b12 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-b12 putative proteorhodopsin gene, partial cds. DQ422368 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATTACTGTGCCTTTACAGCTAATAGAATTTTATTTAATTCTAGCAGCAGTTAAAAAAGTATCTACAGGAATATTCTGGAGAATCTTAATTGGTTCTATAGTAATGTTAGTAGGTGGATACCTTGGAGAAGCTGGATTCATCAACCCTATGCTTGGTTTCATTATAGGTATAGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCTGGAAAAGTTGTTTCTAAATCTGGAAATAAATCTTTAGTTACAGCATTCAGCGCTTTAAGAATGATCGTTACTGTTGGTTGGGCTATTTATCCA RYIDWLITVPLQLIEFYLILAAVKKVSTGIFWRILIGSIVMLVGGYLGEAGFINPMLGFIIGIAGWIYILYEIFSGEAGKVVSKSGNKSLVTAFSALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTGCCTTTACAGCTAATAGAATTTTATTTAATTCTAGCAGCA---------GTT---AAAAAAGTATCTACA---GGAATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCTATAGTAATGTTAGTAGGTGGATACCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACCCT------------------ATGCTTGGT---TTCATTATAGGTATAGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCTGGAAAAGTTGTTTCTAAA------TCT---GGAAATAAATCTTTA---GTT---ACA---GCA---TTC---AGC---GCTTTA---AGAATGATCGTTACTGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLIEFYLILAA---V-KKVST-GI------------FWR-ILIGSIVMLVGGYLGE---A------G--F-----------I----------------------NP------MLG-FIIGIAGWIYILYEI-----F--S-GEAGKVVSK--S-GNKSL-V-T-A-F-S-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422259 [IV-Alpha8-SAR11/IMCC9063] clone_med-20m-a7_DQ422259 gi|90024038|gb|DQ422259| Uncultured bacterium clone med-20m-a7 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-a7 putative proteorhodopsin gene, partial cds. DQ422259 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATTACTGTGCCTTTACAGCTAATAGAATTTTATTTAATTCTAGCAGCAGTTAAAAAAGTATCTACAGGAATATTCTGGAGAATCTTAATTGGTTCTATAGTAATGTTAGTAGGTGGATACCTTGGAGAAGCTGGATTCATCAACCCTATGCTTGGTTTCATTATAGGTATAGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCTGGAAAAGTTGTTTCTAAATCTGGAAATAAATCTTTAGTTACAGCATTCAGCGCTTTAAGAATGATCGTTACTGTTGGTTGGGCTATTTATCCA RYIDWLITVPLQLIEFYLILAAVKKVSTGIFWRILIGSIVMLVGGYLGEAGFINPMLGFIIGIAGWIYILYEIFSGEAGKVVSKSGNKSLVTAFSALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTGCCTTTACAGCTAATAGAATTTTATTTAATTCTAGCAGCA---------GTT---AAAAAAGTATCTACA---GGAATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCTATAGTAATGTTAGTAGGTGGATACCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACCCT------------------ATGCTTGGT---TTCATTATAGGTATAGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCTGGAAAAGTTGTTTCTAAA------TCT---GGAAATAAATCTTTA---GTT---ACA---GCA---TTC---AGC---GCTTTA---AGAATGATCGTTACTGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLIEFYLILAA---V-KKVST-GI------------FWR-ILIGSIVMLVGGYLGE---A------G--F-----------I----------------------NP------MLG-FIIGIAGWIYILYEI-----F--S-GEAGKVVSK--S-GNKSL-V-T-A-F-S-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422450 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-50m-a11_DQ422450 gi|90024420|gb|DQ422450| Uncultured bacterium clone med-tb04-50m-a11 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-a11 putative proteorhodopsin gene, partial cds. DQ422450 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTGCCTTTACAGCTAATAGAATTTTATTTAATTCTAGCAGCAGTTAAAAAAGTATCTACAGGAATATTCTGGAGAATCTTAATTGGTTCTATAGTAATGTTAGTAGGTGGATACCTTGGAGAAGCTGGATTCATCAACCCTATGCTTGGTTTCATTATAGGTATAGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCTGGAAAAGTTGTTTCTAAATCTGGAAATAAATCTTTAGTTACAGCATTCAGCGCTTTAAGAATGATCGTTACTGTTGGTTGGGCTATTTATCCA RYIDWLITVPLQLIEFYLILAAVKKVSTGIFWRILIGSIVMLVGGYLGEAGFINPMLGFIIGIAGWIYILYEIFSGEAGKVVSKSGNKSLVTAFSALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTGCCTTTACAGCTAATAGAATTTTATTTAATTCTAGCAGCA---------GTT---AAAAAAGTATCTACA---GGAATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCTATAGTAATGTTAGTAGGTGGATACCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACCCT------------------ATGCTTGGT---TTCATTATAGGTATAGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCTGGAAAAGTTGTTTCTAAA------TCT---GGAAATAAATCTTTA---GTT---ACA---GCA---TTC---AGC---GCTTTA---AGAATGATCGTTACTGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLIEFYLILAA---V-KKVST-GI------------FWR-ILIGSIVMLVGGYLGE---A------G--F-----------I----------------------NP------MLG-FIIGIAGWIYILYEI-----F--S-GEAGKVVSK--S-GNKSL-V-T-A-F-S-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422660 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-20m-c2_DQ422660 gi|90024840|gb|DQ422660| Uncultured bacterium clone med-tb04-20m-c2 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-c2 putative proteorhodopsin gene, partial cds. DQ422660 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTGCCTTTACAGCTAATAGAATTTTATTTAATTCTAGCAGCAGTTAAAAAAGTATCTACAGGAATATTCTGGAGAATCTTAATTGGTTCTATAGTAATGTTAGTAGGTGGATACCTTGGAGAAGCTGGATTCATCAACCCTATGCTTGGTTTCATTATAGGTATAGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCTGGAAAAGTTGTTTCTAAATCTGGAAATAAATCTTTAGTTACAGCATTCAGCGCTTTAAGAATGATCGTTACTGTTGGTTGGGCTATTTATCCA RYIDWLITVPLQLIEFYLILAAVKKVSTGIFWRILIGSIVMLVGGYLGEAGFINPMLGFIIGIAGWIYILYEIFSGEAGKVVSKSGNKSLVTAFSALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTGCCTTTACAGCTAATAGAATTTTATTTAATTCTAGCAGCA---------GTT---AAAAAAGTATCTACA---GGAATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCTATAGTAATGTTAGTAGGTGGATACCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACCCT------------------ATGCTTGGT---TTCATTATAGGTATAGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCTGGAAAAGTTGTTTCTAAA------TCT---GGAAATAAATCTTTA---GTT---ACA---GCA---TTC---AGC---GCTTTA---AGAATGATCGTTACTGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLIEFYLILAA---V-KKVST-GI------------FWR-ILIGSIVMLVGGYLGE---A------G--F-----------I----------------------NP------MLG-FIIGIAGWIYILYEI-----F--S-GEAGKVVSK--S-GNKSL-V-T-A-F-S-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422577 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-0m-d10_DQ422577 gi|90024674|gb|DQ422577| Uncultured bacterium clone med-tb04-0m-d10 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-d10 putative proteorhodopsin gene, partial cds. DQ422577 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTGCCTTTACAGCTAATAGAATTTTATTTAATTCTAGCAGCAGTTAAAAAAGTATCTACAGGAATATTCTGGAGAATCTTAATTGGTTCTATAGTAATGTTAGTAGGTGGATACCTTGGAGAAGCTGGATTCATCAACCCTATGCTTGGTTTCATTATAGGTATAGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCTGGAAAAGTTGTTTCTAAATCTGGAAATAAATCTTTAGTTACAGCATTCAGCGCTTTAAGAATGATCGTTACTGTTGGTTGGGCTATTTATCCA RYIDWLITVPLQLIEFYLILAAVKKVSTGIFWRILIGSIVMLVGGYLGEAGFINPMLGFIIGIAGWIYILYEIFSGEAGKVVSKSGNKSLVTAFSALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTGCCTTTACAGCTAATAGAATTTTATTTAATTCTAGCAGCA---------GTT---AAAAAAGTATCTACA---GGAATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCTATAGTAATGTTAGTAGGTGGATACCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACCCT------------------ATGCTTGGT---TTCATTATAGGTATAGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCTGGAAAAGTTGTTTCTAAA------TCT---GGAAATAAATCTTTA---GTT---ACA---GCA---TTC---AGC---GCTTTA---AGAATGATCGTTACTGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLIEFYLILAA---V-KKVST-GI------------FWR-ILIGSIVMLVGGYLGE---A------G--F-----------I----------------------NP------MLG-FIIGIAGWIYILYEI-----F--S-GEAGKVVSK--S-GNKSL-V-T-A-F-S-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422268 [IV-Alpha8-SAR11/IMCC9063] clone_med-20m-b4_DQ422268 gi|90024056|gb|DQ422268| Uncultured bacterium clone med-20m-b4 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-b4 putative proteorhodopsin gene, partial cds. DQ422268 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATTACTGTGCCTTTACAGCTAATAGAATTTTATTTAATTCTAGCAGCAGTTAAAAAAGTATCTACAGGAATATTCTGGAGAATCTTAATTGGTTCTATAGTAATGTTAGTAGGTGGATACCTTGGAGAAGCTGGATTCATCAACCCTATGCTTGGTTTCATTATAGGTATAGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCTGGAAAAGTTGTTTCTAAATCTGGAAATAAATCTTTAGTTACAGCATTCAGCGCTTTAAGAATGATCGTTACTGTTGGTTGGGCTATTTATCCA RYIDWLITVPLQLIEFYLILAAVKKVSTGIFWRILIGSIVMLVGGYLGEAGFINPMLGFIIGIAGWIYILYEIFSGEAGKVVSKSGNKSLVTAFSALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTGCCTTTACAGCTAATAGAATTTTATTTAATTCTAGCAGCA---------GTT---AAAAAAGTATCTACA---GGAATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCTATAGTAATGTTAGTAGGTGGATACCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACCCT------------------ATGCTTGGT---TTCATTATAGGTATAGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCTGGAAAAGTTGTTTCTAAA------TCT---GGAAATAAATCTTTA---GTT---ACA---GCA---TTC---AGC---GCTTTA---AGAATGATCGTTACTGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLIEFYLILAA---V-KKVST-GI------------FWR-ILIGSIVMLVGGYLGE---A------G--F-----------I----------------------NP------MLG-FIIGIAGWIYILYEI-----F--S-GEAGKVVSK--S-GNKSL-V-T-A-F-S-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU915862 [IV-Alpha8-SAR11/IMCC9063] APF1127_env_samples_EU915862 gi|229358606|gb|EU915862| Uncultured microorganism clone APF1127 putative proteorhodopsin gene, partial cds Uncultured microorganism clone APF1127 putative proteorhodopsin gene, partial cds EU915862 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample_at_200_m_depth Atlantic Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTAGCCGCTACTGTGTTCTTCTTTATGGAGCAAGCAAACGTTGGTGCTCAGTGGAGAAAATCAGTAAACGTAGCTGGATTAGTAACAGGTATTGCATTTATCCACTATATGTACATGAGAGCGGTTTGGGTTGAAACAGGTGATACTCCAACTGTTTACAGATACATCGATTGGTTAATTACTGTACCACTACAGTTAGTAGAATTTTATCTAATTCTATCTGCAGTTAAGAAAGTACCAACAGGCATATTCTGGAGAATTTTAATCGGTTCTTTAGTGATGTTAATTGGTGGTTATCTTGGAGAAGCAGGAATGATAAATGCTACTCTTGGTTTTGTAATCGGAATGGCTGGATGGATTTACATTTTATATGAAATCTTTTCTGGTGAAGCAGGTAAAGTTGCTGCTAAATCTGGTAACAAATCATTAGTAACAGCATTCAGCGCTTTAAGAATGATCGTTACTGTAGGTTGGGCAATCTAT MVAATVFFFMEQANVGAQWRKSVNVAGLVTGIAFIHYMYMRAVWVETGDTPTVYRYIDWLITVPLQLVEFYLILSAVKKVPTGIFWRILIGSLVMLIGGYLGEAGMINATLGFVIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFSALRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTGTTCTTCTTTATGGAGCAAGCAAACGTTGGTGCT---CAGTGGAGAAAATCAGTAAACGTAGCTGGATTAGTAACAGGTATTGCATTTATCCACTATATGTACATGAGAGCGGTTTGGGTT------------------------------GAAACA---------------------GGTGATACTCCAACTGTTTACAGATACATCGATTGG------------------------TTAATTACTGTACCACTACAGTTAGTAGAATTTTATCTAATTCTATCTGCA---------GTT---AAGAAAGTACCAACA---GGCATA------------------------------------TTCTGGAGA---ATTTTAATCGGTTCTTTAGTGATGTTAATTGGTGGTTATCTTGGAGAA---------GCA------------------GGA------ATG---------------------------------ATA------------------------------------------------------------------AATGCT------------------ACTCTTGGT---TTTGTAATCGGAATGGCTGGATGGATTTACATTTTATATGAAATC---------------TTT------TCT---GGTGAAGCAGGTAAAGTTGCTGCTAAA------TCT---GGTAACAAATCATTA---GTA---ACA---GCA---TTC---AGC---GCTTTA---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCAATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMEQANVGA-QWRKSVNVAGLVTGIAFIHYMYMRAVWV----------ET-------GDTPTVYRYIDW--------LITVPLQLVEFYLILSA---V-KKVPT-GI------------FWR-ILIGSLVMLIGGYLGE---A------G--M-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-S-AL-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EF088548 [IV-Alpha8-SAR11/IMCC9063] clone_APF1127_EF088548 gi|126843320|gb|EF088548| Uncultured bacterium clone APF1127 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone APF1127 putative proteorhodopsin gene, partial cds. EF088548 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na 200m water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTAGCCGCTACTGTGTTCTTCTTTATGGAGCAAGCAAACGTTGGTGCTCAGTGGAGAAAATCAGTAAACGTAGCTGGATTAGTAACAGGTATTGCATTTATCCACTATATGTACATGAGAGCGGTTTGGGTTGAAACAGGTGATACTCCAACTGTTTACAGATACATCGATTGGTTAATTACTGTACCACTACAGTTAGTAGAATTTTATCTAATTCTATCTGCAGTTAAGAAAGTACCAACAGGCATATTCTGGAGAATTTTAATCGGTTCTTTAGTGATGTTAATTGGTGGTTATCTTGGAGAAGCAGGAATGATAAATGCTACTCTTGGTTTTGTAATCGGAATGGCTGGATGGATTTACATTTTATATGAAATCTTTTCTGGTGAAGCAGGTAAAGTTGCTGCTAAATCTGGTAACAAATCATTAGTAACAGCATTCAGCGCTTTAAGAATGATCGTTACTGTAGGTTGGGCAATCTATCCA MVAATVFFFMEQANVGAQWRKSVNVAGLVTGIAFIHYMYMRAVWVETGDTPTVYRYIDWLITVPLQLVEFYLILSAVKKVPTGIFWRILIGSLVMLIGGYLGEAGMINATLGFVIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFSALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTGTTCTTCTTTATGGAGCAAGCAAACGTTGGTGCT---CAGTGGAGAAAATCAGTAAACGTAGCTGGATTAGTAACAGGTATTGCATTTATCCACTATATGTACATGAGAGCGGTTTGGGTT------------------------------GAAACA---------------------GGTGATACTCCAACTGTTTACAGATACATCGATTGG------------------------TTAATTACTGTACCACTACAGTTAGTAGAATTTTATCTAATTCTATCTGCA---------GTT---AAGAAAGTACCAACA---GGCATA------------------------------------TTCTGGAGA---ATTTTAATCGGTTCTTTAGTGATGTTAATTGGTGGTTATCTTGGAGAA---------GCA------------------GGA------ATG---------------------------------ATA------------------------------------------------------------------AATGCT------------------ACTCTTGGT---TTTGTAATCGGAATGGCTGGATGGATTTACATTTTATATGAAATC---------------TTT------TCT---GGTGAAGCAGGTAAAGTTGCTGCTAAA------TCT---GGTAACAAATCATTA---GTA---ACA---GCA---TTC---AGC---GCTTTA---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMEQANVGA-QWRKSVNVAGLVTGIAFIHYMYMRAVWV----------ET-------GDTPTVYRYIDW--------LITVPLQLVEFYLILSA---V-KKVPT-GI------------FWR-ILIGSLVMLIGGYLGE---A------G--M-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-S-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422643 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-20m-a9_DQ422643 gi|90024806|gb|DQ422643| Uncultured bacterium clone med-tb04-20m-a9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-a9 putative proteorhodopsin gene, partial cds. DQ422643 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTACCGCTACAGTTAGTAGAATTTTATCTAATTCTATCTGCAGTTAAGAAAGTACCAACAGGTATATTCTGGAGAATTTTAATAGGTTCTTTAGTTATGTTAGTTGGTGGTTATCTTGGAGAAGCAGGAATGATAAATGCTACTCTTGGTTTTGTAATCGGAATGGCTGGATGGATTTATATTTTATATGAAATCTTTTCTGGTGAAGCAGGTAAAGTTGCTGCTAAATCTGGTAACAAATCATTAGTAACAGCATTCAGTGCTTTAAGAATGATCGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVKKVPTGIFWRILIGSLVMLVGGYLGEAGMINATLGFVIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFSALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTACCGCTACAGTTAGTAGAATTTTATCTAATTCTATCTGCA---------GTT---AAGAAAGTACCAACA---GGTATA------------------------------------TTCTGGAGA---ATTTTAATAGGTTCTTTAGTTATGTTAGTTGGTGGTTATCTTGGAGAA---------GCA------------------GGA------ATG---------------------------------ATA------------------------------------------------------------------AATGCT------------------ACTCTTGGT---TTTGTAATCGGAATGGCTGGATGGATTTATATTTTATATGAAATC---------------TTT------TCT---GGTGAAGCAGGTAAAGTTGCTGCTAAA------TCT---GGTAACAAATCATTA---GTA---ACA---GCA---TTC---AGT---GCTTTA---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-KKVPT-GI------------FWR-ILIGSLVMLVGGYLGE---A------G--M-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-S-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422594 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-0m-e5_DQ422594 gi|90024708|gb|DQ422594| Uncultured bacterium clone med-tb04-0m-e5 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-e5 putative proteorhodopsin gene, partial cds. DQ422594 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTACCACTACAGTTAGTAGAATTTTATCTAATTCTATCTGCAGTTAAGAAAGTGCCAACAGGAATATTCTGGAGAATTTTAATCGGTTCTTTAGTTATGTTAGTTGGTGGTTATCTTGGAGAAGCAGGAATGATAAATGCTACTCTTGGTTTTGTAATCGGAATGGCTGGATGGATTTACATCTTATATGAAATCTTTTCTGGTGAAGCAGGTAAAGTTGCTGCTAAATCTGGTAACAAATCATTAGTAACAGCATTCAGCGCTTTAAGGATGATCGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVKKVPTGIFWRILIGSLVMLVGGYLGEAGMINATLGFVIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFSALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTACCACTACAGTTAGTAGAATTTTATCTAATTCTATCTGCA---------GTT---AAGAAAGTGCCAACA---GGAATA------------------------------------TTCTGGAGA---ATTTTAATCGGTTCTTTAGTTATGTTAGTTGGTGGTTATCTTGGAGAA---------GCA------------------GGA------ATG---------------------------------ATA------------------------------------------------------------------AATGCT------------------ACTCTTGGT---TTTGTAATCGGAATGGCTGGATGGATTTACATCTTATATGAAATC---------------TTT------TCT---GGTGAAGCAGGTAAAGTTGCTGCTAAA------TCT---GGTAACAAATCATTA---GTA---ACA---GCA---TTC---AGC---GCTTTA---AGGATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-KKVPT-GI------------FWR-ILIGSLVMLVGGYLGE---A------G--M-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-S-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422582 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-0m-d5_DQ422582 gi|90024684|gb|DQ422582| Uncultured bacterium clone med-tb04-0m-d5 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-d5 putative proteorhodopsin gene, partial cds. DQ422582 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATTGACTGGCTAATCACTGTACCTTTACAGCTAGTAGAATTTTATCTAATTCTGTCAGCAGTGAAAAAAGTACCAACAGGAATTTTCTGGAGAATCTTAATTGGTTCAATAGTTATGCTTGTAGGTGGATACCTAGGAGAAGCAGGTTTCATCAACGAAATGCTTGGTTTTGTAATCGGTATGGCTGGATGGCTTTACATTCTTTTTGAAATATTTTCAGGAGAAGCAGGAAAAGTTGCAGCTAAATCTGGTAACAAATCCTTAACAACTGCATTCGGTGCTTTAAGAATGATCGTTACAGTTGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVKKVPTGIFWRILIGSIVMLVGGYLGEAGFINEMLGFVIGMAGWLYILFEIFSGEAGKVAAKSGNKSLTTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATCACTGTACCTTTACAGCTAGTAGAATTTTATCTAATTCTGTCAGCA---------GTG---AAAAAAGTACCAACA---GGAATT------------------------------------TTCTGGAGA---ATCTTAATTGGTTCAATAGTTATGCTTGTAGGTGGATACCTAGGAGAA---------GCA------------------GGT------TTC---------------------------------ATC------------------------------------------------------------------AACGAA------------------ATGCTTGGT---TTTGTAATCGGTATGGCTGGATGGCTTTACATTCTTTTTGAAATA---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCAGCTAAA------TCT---GGTAACAAATCCTTA---ACA---ACT---GCA---TTC---GGT---GCTTTA---AGAATGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-KKVPT-GI------------FWR-ILIGSIVMLVGGYLGE---A------G--F-----------I----------------------NE------MLG-FVIGMAGWLYILFEI-----F--S-GEAGKVAAK--S-GNKSL-T-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422453 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-50m-a5_DQ422453 gi|90024426|gb|DQ422453| Uncultured bacterium clone med-tb04-50m-a5 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-a5 putative proteorhodopsin gene, partial cds. DQ422453 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na GGATACATAGACTGGCTAATCACTGTACCTTTACAGCTAGTAGAATTTTATCTAATTCTGTCAGCAGTGAAAAAAGTACCAACAGGAATTTTCTGGAGAATCTTAATTGGTTCAATAGTTATGCTTGTAGGTGGATACCTAGAAGAAGCAGGTTTCATCAACGAAATGCTTGGTTTTGTAATCGGTATGGCTGGATGGCTTTACATTCTTTTTGAAATATTTTCAGGAGAAGCAGGAAAAGTTGCAGCTAAATCTGGTAACAAATCCTTAACAACTGCATTCGGTGCTTTAAGAATGATCGTTACAGTTGGTTGGGCTATTTATCCA GYIDWLITVPLQLVEFYLILSAVKKVPTGIFWRILIGSIVMLVGGYLEEAGFINEMLGFVIGMAGWLYILFEIFSGEAGKVAAKSGNKSLTTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGATACATAGACTGG------------------------CTAATCACTGTACCTTTACAGCTAGTAGAATTTTATCTAATTCTGTCAGCA---------GTG---AAAAAAGTACCAACA---GGAATT------------------------------------TTCTGGAGA---ATCTTAATTGGTTCAATAGTTATGCTTGTAGGTGGATACCTAGAAGAA---------GCA------------------GGT------TTC---------------------------------ATC------------------------------------------------------------------AACGAA------------------ATGCTTGGT---TTTGTAATCGGTATGGCTGGATGGCTTTACATTCTTTTTGAAATA---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCAGCTAAA------TCT---GGTAACAAATCCTTA---ACA---ACT---GCA---TTC---GGT---GCTTTA---AGAATGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GYIDW--------LITVPLQLVEFYLILSA---V-KKVPT-GI------------FWR-ILIGSIVMLVGGYLEE---A------G--F-----------I----------------------NE------MLG-FVIGMAGWLYILFEI-----F--S-GEAGKVAAK--S-GNKSL-T-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422548 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-0m-a5_DQ422548 gi|90024616|gb|DQ422548| Uncultured bacterium clone med-tb04-0m-a5 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-a5 putative proteorhodopsin gene, partial cds. DQ422548 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATCACTGTACCTTTACAGCTAGTAGAATTTTATCTAATTCTGTCAGCAGTGAAAAAAGTACCAACAGGAATTTTCTGGAGAATCTTAATTGGTTCAATAGTTATGCTTGTAGGTGGATACCTAGGAGAAGCAGGTTTCATCAACGAGATGCTTGGTTTTGTAATCGGTATGGCTGGATGGCTTTACATTCTTTTTGAAATATTTTCAGGAGAAGCAGGAAAAGTTGCAGCTAAATCTGGTAACAAATCCTTAACAACTGCATTCGGTGCTTTAAGAATGATCGTTACAGTTGGTTGGGCTATTTATCCA RYIDWLITVPLQLVEFYLILSAVKKVPTGIFWRILIGSIVMLVGGYLGEAGFINEMLGFVIGMAGWLYILFEIFSGEAGKVAAKSGNKSLTTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATCACTGTACCTTTACAGCTAGTAGAATTTTATCTAATTCTGTCAGCA---------GTG---AAAAAAGTACCAACA---GGAATT------------------------------------TTCTGGAGA---ATCTTAATTGGTTCAATAGTTATGCTTGTAGGTGGATACCTAGGAGAA---------GCA------------------GGT------TTC---------------------------------ATC------------------------------------------------------------------AACGAG------------------ATGCTTGGT---TTTGTAATCGGTATGGCTGGATGGCTTTACATTCTTTTTGAAATA---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCAGCTAAA------TCT---GGTAACAAATCCTTA---ACA---ACT---GCA---TTC---GGT---GCTTTA---AGAATGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQLVEFYLILSA---V-KKVPT-GI------------FWR-ILIGSIVMLVGGYLGE---A------G--F-----------I----------------------NE------MLG-FVIGMAGWLYILFEI-----F--S-GEAGKVAAK--S-GNKSL-T-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926103 [IV-Alpha8-SAR11/IMCC9063] BOUM_OTU016_env_samples gb|KJ926103| Uncultured bacterium clone BOUM OTU016 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU016 putative proteorhodopsin gene, partial cds KJ926103 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other #na 2008 #na Mediterranean Sea marine 33.709667 32.644667 #na #na #na #na #na ATTGATTGGTTAATCACTGTACCTTTACAGCTAGTAGAATTTTATCTAATTCTGTCAGCAGTGAAAAAAGTACCAACAGGAATTTTCTGGAGAATCTTAATTGGTTCAATAGTTATGCTTGTAGGTGGATACCTAGGAGAAGCAGGTTTCATCAACGAGATGCTTGGTTTTGTAATCGGTATGGCTGGATGGCTTTACATTCTTTTTGAAATATTTTCAGGAGAAGCAGGAAAAGTTGCAGCTAAATCTGGTAACAAATCCTTAACAACTGCATTCGGTGCTTTAAGAATGATCGTTACAGTTGGGTGGGCTATATAC IDWLITVPLQLVEFYLILSAVKKVPTGIFWRILIGSIVMLVGGYLGEAGFINEMLGFVIGMAGWLYILFEIFSGEAGKVAAKSGNKSLTTAFGALRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGATTGG------------------------TTAATCACTGTACCTTTACAGCTAGTAGAATTTTATCTAATTCTGTCAGCA---------GTG---AAAAAAGTACCAACA---GGAATT------------------------------------TTCTGGAGA---ATCTTAATTGGTTCAATAGTTATGCTTGTAGGTGGATACCTAGGAGAA---------GCA------------------GGT------TTC---------------------------------ATC------------------------------------------------------------------AACGAG------------------ATGCTTGGT---TTTGTAATCGGTATGGCTGGATGGCTTTACATTCTTTTTGAAATA---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCAGCTAAA------TCT---GGTAACAAATCCTTA---ACA---ACT---GCA---TTC---GGT---GCTTTA---AGAATGATCGTTACAGTT---------------------------------------------------------------GGGTGG---------GCTATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDW--------LITVPLQLVEFYLILSA---V-KKVPT-GI------------FWR-ILIGSIVMLVGGYLGE---A------G--F-----------I----------------------NE------MLG-FVIGMAGWLYILFEI-----F--S-GEAGKVAAK--S-GNKSL-T-T-A-F-G-AL-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU915730 [IV-Alpha8-SAR11/IMCC9063] APF9061_env_samples_EU915730 gi|229358342|gb|EU915730| Uncultured microorganism clone APF9061 putative proteorhodopsin gene, partial cds Uncultured microorganism clone APF9061 putative proteorhodopsin gene, partial cds EU915730 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample_at_75_m_depth Atlantic Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTTGCCGCTACAGTCTTCTTCTTTATGGAGCAAGCTAATGTTAGCACTCAGTGGAGAAAATCAGTAAACGTAGCTGGATTAGTAACTGGTATAGCATTCATTCACTATATGTACATGAGAGCAGTATGGGTTGAAACAGGTGATACACCAACTGTTTACAGATATATTGATTGGTTGATTACTGTACCACTACAGTTAATAGAATTTTATTTAATTCTAGCTGCAGTTAAAAAAGTTCCAACTGGAATATTCTGGAGAATCTTAATTGGTTCTTTAGTAATGTTAGTAGGTGGATATTTAGGAGAAGCAGGATTCATCAACCCTATGCTTGGTTTCATTATCGGTATGGCTGGATGGATTTACATCCTTTATGAAATATTTTCAGGAGAAGCAGGAAAAGTTGTTTCTAAATCTGGAAATAAATCACTTGCAACAGCATTTGGTGCTTTAAGAATGATCGTTACAGTAGGTTGGGCCATTTAC MVAATVFFFMEQANVSTQWRKSVNVAGLVTGIAFIHYMYMRAVWVETGDTPTVYRYIDWLITVPLQLIEFYLILAAVKKVPTGIFWRILIGSLVMLVGGYLGEAGFINPMLGFIIGMAGWIYILYEIFSGEAGKVVSKSGNKSLATAFGALRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACAGTCTTCTTCTTTATGGAGCAAGCTAATGTTAGCACT---CAGTGGAGAAAATCAGTAAACGTAGCTGGATTAGTAACTGGTATAGCATTCATTCACTATATGTACATGAGAGCAGTATGGGTT------------------------------GAAACA---------------------GGTGATACACCAACTGTTTACAGATATATTGATTGG------------------------TTGATTACTGTACCACTACAGTTAATAGAATTTTATTTAATTCTAGCTGCA---------GTT---AAAAAAGTTCCAACT---GGAATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCTTTAGTAATGTTAGTAGGTGGATATTTAGGAGAA---------GCA------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACCCT------------------ATGCTTGGT---TTCATTATCGGTATGGCTGGATGGATTTACATCCTTTATGAAATA---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGTTTCTAAA------TCT---GGAAATAAATCACTT---GCA---ACA---GCA---TTT---GGT---GCTTTA---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCCATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMEQANVST-QWRKSVNVAGLVTGIAFIHYMYMRAVWV----------ET-------GDTPTVYRYIDW--------LITVPLQLIEFYLILAA---V-KKVPT-GI------------FWR-ILIGSLVMLVGGYLGE---A------G--F-----------I----------------------NP------MLG-FIIGMAGWIYILYEI-----F--S-GEAGKVVSK--S-GNKSL-A-T-A-F-G-AL-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EF088523 [IV-Alpha8-SAR11/IMCC9063] clone_APF9061_EF088523 gi|126843263|gb|EF088523| Uncultured bacterium clone APF9061 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone APF9061 putative proteorhodopsin gene, partial cds. EF088523 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na 75m water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTTGCCGCTACAGTCTTCTTCTTTATGGAGCAAGCTAATGTTAGCACTCAGTGGAGAAAATCAGTAAACGTAGCTGGATTAGTAACTGGTATAGCATTCATTCACTATATGTACATGAGAGCAGTATGGGTTGAAACAGGTGATACACCAACTGTTTACAGATATATTGATTGGTTGATTACTGTACCACTACAGTTAATAGAATTTTATTTAATTCTAGCTGCAGTTAAAAAAGTTCCAACTGGAATATTCTGGAGAATCTTAATTGGTTCTTTAGTAATGTTAGTAGGTGGATATTTAGGAGAAGCAGGATTCATCAACCCTATGCTTGGTTTCATTATCGGTATGGCTGGATGGATTTACATCCTTTATGAAATATTTTCAGGAGAAGCAGGAAAAGTTGTTTCTAAATCTGGAAATAAATCACTTGCAACAGCATTTGGTGCTTTAAGAATGATCGTTACAGTAGGTTGGGCCATTTACCCA MVAATVFFFMEQANVSTQWRKSVNVAGLVTGIAFIHYMYMRAVWVETGDTPTVYRYIDWLITVPLQLIEFYLILAAVKKVPTGIFWRILIGSLVMLVGGYLGEAGFINPMLGFIIGMAGWIYILYEIFSGEAGKVVSKSGNKSLATAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACAGTCTTCTTCTTTATGGAGCAAGCTAATGTTAGCACT---CAGTGGAGAAAATCAGTAAACGTAGCTGGATTAGTAACTGGTATAGCATTCATTCACTATATGTACATGAGAGCAGTATGGGTT------------------------------GAAACA---------------------GGTGATACACCAACTGTTTACAGATATATTGATTGG------------------------TTGATTACTGTACCACTACAGTTAATAGAATTTTATTTAATTCTAGCTGCA---------GTT---AAAAAAGTTCCAACT---GGAATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCTTTAGTAATGTTAGTAGGTGGATATTTAGGAGAA---------GCA------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACCCT------------------ATGCTTGGT---TTCATTATCGGTATGGCTGGATGGATTTACATCCTTTATGAAATA---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGTTTCTAAA------TCT---GGAAATAAATCACTT---GCA---ACA---GCA---TTT---GGT---GCTTTA---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMEQANVST-QWRKSVNVAGLVTGIAFIHYMYMRAVWV----------ET-------GDTPTVYRYIDW--------LITVPLQLIEFYLILAA---V-KKVPT-GI------------FWR-ILIGSLVMLVGGYLGE---A------G--F-----------I----------------------NP------MLG-FIIGMAGWIYILYEI-----F--S-GEAGKVVSK--S-GNKSL-A-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926091 [IV-Alpha8-SAR11/IMCC9063] BOUM_OTU004_env_samples gb|KJ926091| Uncultured bacterium clone BOUM OTU004 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU004 putative proteorhodopsin gene, partial cds KJ926091 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other #na 2008 #na Mediterranean Sea marine 39.0995 5.3403333 #na #na #na #na #na GTAGACTGGTTAATAACTGTACCACTTCAGTTAATAGAATTTTATTTAATTCTAGCAGCAGTTAAGAAAGTTCCAACAGGAATATTCTGGAGAATCTTAATGGGTTCTTTAGTAATGTTAGTAGGTGGATATTGTGGAGAAGCTGGATTTATCGCGCCAATGCTTGGTTTCATTATCGGTATGGCAGGATGGATTTACATTCTTTATGAAATCTTTTCAGGCGAGGCAGGTAAAACTGTTGCGAGATCTGGAAACAAATCACTTGCAACAGCATTTGGTGCTTTAAGAATGATCGTTACAGTTGGCTGGGCTATCTAC VDWLITVPLQLIEFYLILAAVKKVPTGIFWRILMGSLVMLVGGYCGEAGFIAPMLGFIIGMAGWIYILYEIFSGEAGKTVARSGNKSLATAFGALRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGACTGG------------------------TTAATAACTGTACCACTTCAGTTAATAGAATTTTATTTAATTCTAGCAGCA---------GTT---AAGAAAGTTCCAACA---GGAATA------------------------------------TTCTGGAGA---ATCTTAATGGGTTCTTTAGTAATGTTAGTAGGTGGATATTGTGGAGAA---------GCT------------------GGA------TTT---------------------------------ATC------------------------------------------------------------------GCGCCA------------------ATGCTTGGT---TTCATTATCGGTATGGCAGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGCGAGGCAGGTAAAACTGTTGCGAGA------TCT---GGAAACAAATCACTT---GCA---ACA---GCA---TTT---GGT---GCTTTA---AGAATGATCGTTACAGTT---------------------------------------------------------------GGCTGG---------GCTATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPLQLIEFYLILAA---V-KKVPT-GI------------FWR-ILMGSLVMLVGGYCGE---A------G--F-----------I----------------------AP------MLG-FIIGMAGWIYILYEI-----F--S-GEAGKTVAR--S-GNKSL-A-T-A-F-G-AL-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU915766 [IV-Alpha8-SAR11/IMCC9063] PF75121_env_samples_EU915766 gi|229358414|gb|EU915766| Uncultured microorganism clone PF75121 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF75121 putative proteorhodopsin gene, partial cds EU915766 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGTCTTCTTCATGGAAAGAAATACTGTTGCAGCAGGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTAATGACTGGAGATTCTCCAACAGTATATAGATATATTGATTGGCTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAACTCTAGCAGCAGTTAAGAAAATCCCAGGAGCAATCTTCTGGAGATTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAAGCAGGTTACATCAATGCTATGCTTGGTTTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCTGGTGAAGCTGGAAAAATTGCAGCTAAAACTGGAAACAAGCCATTAGCAGCTGCATGGGGTGCTATGAGAATGATCGTAACAATAGGCTGGGCCATATAC MVAATVFFMERNTVAAGWKTSVTVAGLVTGVAFIHYMYMRDVWVMTGDSPTVYRYIDWLITVPLQMIEFYLTLAAVKKIPGAIFWRLLIGSLVMLIGGYLGEAGYINAMLGFIVGMAGWIYILYEVFSGEAGKIAAKTGNKPLAAAWGAMRMIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTC---TTCTTCATGGAAAGAAATACTGTTGCAGCA---GGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTA------------------------------ATGACT---------------------GGAGATTCTCCAACAGTATATAGATATATTGATTGG------------------------CTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAACTCTAGCAGCA---------GTT---AAGAAAATCCCAGGA---GCAATC------------------------------------TTCTGGAGA---TTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ATGCTTGGT---TTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCTGGAAAAATTGCAGCTAAA------ACT---GGAAACAAGCCATTA---GCA---GCT---GCA---TGG---GGT---GCTATG---AGAATGATCGTAACAATA---------------------------------------------------------------GGCTGG---------GCCATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATV-FFMERNTVAA-GWKTSVTVAGLVTGVAFIHYMYMRDVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLTLAA---V-KKIPG-AI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------MLG-FIVGMAGWIYILYEV-----F--S-GEAGKIAAK--T-GNKPL-A-A-A-W-G-AM-RMIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ926987 [IV-Alpha8-SAR11/IMCC9063] clone_PF91026_DQ926987 gi|116294089|gb|DQ926987| Uncultured bacterium clone PF91026 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF91026 putative proteorhodopsin gene, partial cds. DQ926987 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGGTGGCCGCTACTGTCTTCTTCTTCATGGAAAGAAATACTGTTGCAGCAGGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTAATGACTGGAGATTCTCCAACAGTATATAGATATATTGATTGGTTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAACTCTAGCAGCAGTTAAGAAAATCCCAGGAGCAATCTTCTGGAGATTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAAGCAGGTTACATCAATGCTATGCTTGGTTTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCTGGTGAAGCTGGAAAAATTGCAGCTAAAACTGGAAACAAGCCATTAGCAGCTGCATGGGGTGCTATGAGAATGATCGTAACAATCGGTTGGGCCATATATCCA MVAATVFFFMERNTVAAGWKTSVTVAGLVTGVAFIHYMYMRDVWVMTGDSPTVYRYIDWLITVPLQMIEFYLTLAAVKKIPGAIFWRLLIGSLVMLIGGYLGEAGYINAMLGFIVGMAGWIYILYEVFSGEAGKIAAKTGNKPLAAAWGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTCTTCTTCTTCATGGAAAGAAATACTGTTGCAGCA---GGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTA------------------------------ATGACT---------------------GGAGATTCTCCAACAGTATATAGATATATTGATTGG------------------------TTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAACTCTAGCAGCA---------GTT---AAGAAAATCCCAGGA---GCAATC------------------------------------TTCTGGAGA---TTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ATGCTTGGT---TTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCTGGAAAAATTGCAGCTAAA------ACT---GGAAACAAGCCATTA---GCA---GCT---GCA---TGG---GGT---GCTATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERNTVAA-GWKTSVTVAGLVTGVAFIHYMYMRDVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLTLAA---V-KKIPG-AI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------MLG-FIVGMAGWIYILYEV-----F--S-GEAGKIAAK--T-GNKPL-A-A-A-W-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU915840 [IV-Alpha8-SAR11/IMCC9063] PF12033_env_samples_EU915840 gi|229358562|gb|EU915840| Uncultured microorganism clone PF12033 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF12033 putative proteorhodopsin gene, partial cds EU915840 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTAGCCGCTACTGTATTCTTCTTCATGGAAAGAAATACTGTTGCAGCAGGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTAATGACTGGAGATTCTCCAACAGTATATAGATATATTGATTGGTTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAACTCTAGCAGCAGTTAAGAAAATCCCAGGAGCAATCTTCTGGAGATTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAAGCAGGTTACATCAATGCTATGCTTGGTTTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCTGGTGAAGCTGGAAAAATTGCAGCTAAAACTGGAAACAAGCCATTAGCAGCTGCATGGGGTGCTATGAGAATGATCGTAACAATCGGCTGGGCCATTTAC MVAATVFFFMERNTVAAGWKTSVTVAGLVTGVAFIHYMYMRDVWVMTGDSPTVYRYIDWLITVPLQMIEFYLTLAAVKKIPGAIFWRLLIGSLVMLIGGYLGEAGYINAMLGFIVGMAGWIYILYEVFSGEAGKIAAKTGNKPLAAAWGAMRMIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTATTCTTCTTCATGGAAAGAAATACTGTTGCAGCA---GGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTA------------------------------ATGACT---------------------GGAGATTCTCCAACAGTATATAGATATATTGATTGG------------------------TTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAACTCTAGCAGCA---------GTT---AAGAAAATCCCAGGA---GCAATC------------------------------------TTCTGGAGA---TTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ATGCTTGGT---TTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCTGGAAAAATTGCAGCTAAA------ACT---GGAAACAAGCCATTA---GCA---GCT---GCA---TGG---GGT---GCTATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGCTGG---------GCCATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERNTVAA-GWKTSVTVAGLVTGVAFIHYMYMRDVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLTLAA---V-KKIPG-AI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------MLG-FIVGMAGWIYILYEV-----F--S-GEAGKIAAK--T-GNKPL-A-A-A-W-G-AM-RMIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ927033 [IV-Alpha8-SAR11/IMCC9063] clone_AT06031_DQ927033 gi|116294181|gb|DQ927033| Uncultured bacterium clone AT06031 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT06031 putative proteorhodopsin gene, partial cds. DQ927033 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGCTGGCCGCTACTGCGTTCTTCTTCATGGAAAGAAATACTGTTGCAGCAGGCTGGAAAACTTCAGTATCAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTAATGACTGGAGATTCTCCAACAGTATATAGATATATTGATTGGTTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAATTCTAGCAGCAGTTAAGAAAATCCCAGGAGCAATCTTCTGGAGATTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAAGCAGGTTACATCAATGCTATGCTTGGTTTTATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCTGGTGAAGCTGGAAAAATTGCAGCTAAAACTGGAAACAAACCATTAGCAACTGCATGGGGTGCTATGAGAATGATCGTAACAATCGGCTGGGCAATTTACCCA MLAATAFFFMERNTVAAGWKTSVSVAGLVTGVAFIHYMYMRDVWVMTGDSPTVYRYIDWLITVPLQMIEFYLILAAVKKIPGAIFWRLLIGSLVMLIGGYLGEAGYINAMLGFIVGMAGWIYILYEVFSGEAGKIAAKTGNKPLATAWGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGCGTTCTTCTTCATGGAAAGAAATACTGTTGCAGCA---GGCTGGAAAACTTCAGTATCAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTA------------------------------ATGACT---------------------GGAGATTCTCCAACAGTATATAGATATATTGATTGG------------------------TTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAATTCTAGCAGCA---------GTT---AAGAAAATCCCAGGA---GCAATC------------------------------------TTCTGGAGA---TTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ATGCTTGGT---TTTATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCTGGAAAAATTGCAGCTAAA------ACT---GGAAACAAACCATTA---GCA---ACT---GCA---TGG---GGT---GCTATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGCTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFMERNTVAA-GWKTSVSVAGLVTGVAFIHYMYMRDVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-KKIPG-AI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------MLG-FIVGMAGWIYILYEV-----F--S-GEAGKIAAK--T-GNKPL-A-T-A-W-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ887783 [IV-Alpha8-SAR11/IMCC9063] clone_PF10007_DQ887783 gi|116294266|gb|DQ887783| Uncultured bacterium clone PF10007 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF10007 putative proteorhodopsin gene, partial cds. DQ887783 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2007 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGCTAGCCGCTACTGCGTTCTTCTTCATGGAAAGAAATACTGTTGCAGCAGGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTAATGACTGGAGATTCTCCAACAGTATATAGATATATTGATTGGTTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAACTCTAGCAGCAGTTAAGAAAATCCCAGGAGCAATCTTCTGGAGATTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAAGCAGGTTACATCAATGCTATGCTTGGTTTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCTGGTGAAGCTGGAAAAATTGCAGCTAAAACTGGAAACAAGCCATTAGCAGCTGCATGGGGTGCTATGAGAATGATCGTAACAATCGGCTGGGCAATATACCCA MLAATAFFFMERNTVAAGWKTSVTVAGLVTGVAFIHYMYMRDVWVMTGDSPTVYRYIDWLITVPLQMIEFYLTLAAVKKIPGAIFWRLLIGSLVMLIGGYLGEAGYINAMLGFIVGMAGWIYILYEVFSGEAGKIAAKTGNKPLAAAWGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTAGCCGCTACTGCGTTCTTCTTCATGGAAAGAAATACTGTTGCAGCA---GGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTA------------------------------ATGACT---------------------GGAGATTCTCCAACAGTATATAGATATATTGATTGG------------------------TTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAACTCTAGCAGCA---------GTT---AAGAAAATCCCAGGA---GCAATC------------------------------------TTCTGGAGA---TTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ATGCTTGGT---TTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCTGGAAAAATTGCAGCTAAA------ACT---GGAAACAAGCCATTA---GCA---GCT---GCA---TGG---GGT---GCTATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGCTGG---------GCAATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFMERNTVAA-GWKTSVTVAGLVTGVAFIHYMYMRDVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLTLAA---V-KKIPG-AI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------MLG-FIVGMAGWIYILYEV-----F--S-GEAGKIAAK--T-GNKPL-A-A-A-W-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ887799 [IV-Alpha8-SAR11/IMCC9063] clone_PF10027_DQ887799 gi|116294298|gb|DQ887799| Uncultured bacterium clone PF10027 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF10027 putative proteorhodopsin gene, partial cds. DQ887799 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2007 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGCTAGCCGCTACTGCGTTCTTCTTCATGGAAAGAAATACTGTTGCAGCAGGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTAATGACTGGAGATTCTCCAACAGTATATAGATATATTGATTGGTTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAACTCTAGCAGCAGTTAAGAAAATCCCAGGAGCAATCTTCTGGAGATTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAAGCAGGTTACATCAATGCTATGCTTGGTTTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCTGGTGAAGCTGGAAAAATTGCAGCTAAAACTGGAAACAAGCCATTAGCAGCTGCATGGGGTGCTATGAGAATGATCGTAACAATCGGCTGGGCAATATACCCA MLAATAFFFMERNTVAAGWKTSVTVAGLVTGVAFIHYMYMRDVWVMTGDSPTVYRYIDWLITVPLQMIEFYLTLAAVKKIPGAIFWRLLIGSLVMLIGGYLGEAGYINAMLGFIVGMAGWIYILYEVFSGEAGKIAAKTGNKPLAAAWGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTAGCCGCTACTGCGTTCTTCTTCATGGAAAGAAATACTGTTGCAGCA---GGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTA------------------------------ATGACT---------------------GGAGATTCTCCAACAGTATATAGATATATTGATTGG------------------------TTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAACTCTAGCAGCA---------GTT---AAGAAAATCCCAGGA---GCAATC------------------------------------TTCTGGAGA---TTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ATGCTTGGT---TTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCTGGAAAAATTGCAGCTAAA------ACT---GGAAACAAGCCATTA---GCA---GCT---GCA---TGG---GGT---GCTATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGCTGG---------GCAATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFMERNTVAA-GWKTSVTVAGLVTGVAFIHYMYMRDVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLTLAA---V-KKIPG-AI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------MLG-FIVGMAGWIYILYEV-----F--S-GEAGKIAAK--T-GNKPL-A-A-A-W-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU915835 [IV-Alpha8-SAR11/IMCC9063] PF12014_env_samples_EU915835 gi|229358552|gb|EU915835| Uncultured microorganism clone PF12014 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF12014 putative proteorhodopsin gene, partial cds EU915835 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGTTTTCTTCTTCATGGAAAGAAATACTGTTGCAGCAGGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTAATGACTGGAGATTCTCCAACAGTATATAGATATATTGATTGGTTAATCACTGTGCCATTACAGATGATCGAGTTTTACTTAACTCTAGCAGCAGTTAAAAAAATCCCAGGAGCAATCTTCTGGAGATTATTGATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAAGCAGGTTACATCAATGCTATGCTTGGTTTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCTGGTGAAGCTGGAAAAATTGCAGCTAAAACTGGAAACAAGCCATTAGCAGCTGCATGGGGTGCTATGAGAATGATCGTAACAATCGGGTGGGCTATCTAT MVAATVFFFMERNTVAAGWKTSVTVAGLVTGVAFIHYMYMRDVWVMTGDSPTVYRYIDWLITVPLQMIEFYLTLAAVKKIPGAIFWRLLIGSLVMLIGGYLGEAGYINAMLGFIVGMAGWIYILYEVFSGEAGKIAAKTGNKPLAAAWGAMRMIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTTTTCTTCTTCATGGAAAGAAATACTGTTGCAGCA---GGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTA------------------------------ATGACT---------------------GGAGATTCTCCAACAGTATATAGATATATTGATTGG------------------------TTAATCACTGTGCCATTACAGATGATCGAGTTTTACTTAACTCTAGCAGCA---------GTT---AAAAAAATCCCAGGA---GCAATC------------------------------------TTCTGGAGA---TTATTGATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ATGCTTGGT---TTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCTGGAAAAATTGCAGCTAAA------ACT---GGAAACAAGCCATTA---GCA---GCT---GCA---TGG---GGT---GCTATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGGTGG---------GCTATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERNTVAA-GWKTSVTVAGLVTGVAFIHYMYMRDVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLTLAA---V-KKIPG-AI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------MLG-FIVGMAGWIYILYEV-----F--S-GEAGKIAAK--T-GNKPL-A-A-A-W-G-AM-RMIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU915846 [IV-Alpha8-SAR11/IMCC9063] PF12042_env_samples_EU915846 gi|229358574|gb|EU915846| Uncultured microorganism clone PF12042 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF12042 putative proteorhodopsin gene, partial cds EU915846 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTCGCCGCTACTGTATTCTTCTTCATGGAAAGAAACACTGTTGCAGCAGGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTAATGACTGGAGATTCTCCAACAGTATATAGATATATTGATTGGTTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAACTCTAGCAGCAGTTAAGAAAATCCCAGGAGCAATCTTCTGGAGATTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAAGCAGGTTACATCAATGCTATGCTTGGTTTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCTGGTGAAGCTGGAAAAATTGCAGCTAAAACTGGAAACAAGCCATTAGCAGCTGCATGGGGTGCTATGAGAATGATCGTAACAATCGGTTGGGCTATCTAT MVAATVFFFMERNTVAAGWKTSVTVAGLVTGVAFIHYMYMRDVWVMTGDSPTVYRYIDWLITVPLQMIEFYLTLAAVKKIPGAIFWRLLIGSLVMLIGGYLGEAGYINAMLGFIVGMAGWIYILYEVFSGEAGKIAAKTGNKPLAAAWGAMRMIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCCGCTACTGTATTCTTCTTCATGGAAAGAAACACTGTTGCAGCA---GGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTA------------------------------ATGACT---------------------GGAGATTCTCCAACAGTATATAGATATATTGATTGG------------------------TTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAACTCTAGCAGCA---------GTT---AAGAAAATCCCAGGA---GCAATC------------------------------------TTCTGGAGA---TTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ATGCTTGGT---TTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCTGGAAAAATTGCAGCTAAA------ACT---GGAAACAAGCCATTA---GCA---GCT---GCA---TGG---GGT---GCTATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGTTGG---------GCTATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERNTVAA-GWKTSVTVAGLVTGVAFIHYMYMRDVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLTLAA---V-KKIPG-AI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------MLG-FIVGMAGWIYILYEV-----F--S-GEAGKIAAK--T-GNKPL-A-A-A-W-G-AM-RMIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU915757 [IV-Alpha8-SAR11/IMCC9063] PF75109_env_samples_EU915757 gi|229358396|gb|EU915757| Uncultured microorganism clone PF75109 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF75109 putative proteorhodopsin gene, partial cds EU915757 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTCGCCGCTACTGTTTTCTTCTTCATGGAAAGAAATACTGTTGCAGCAGGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTAATGACTGGAGATTCTCCAACAGTATATAGATATATTGATTGGTTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAACTCTAGCAGCAGTTAAGAAAATCCCAGGAGCAATCTTCTGGAGATTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAAGCAGGTTACATCAATGCTATGCTTGGTTTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCTGGTGAAGCTGGAAAAATTGCAGCTAAAACTGGAAACAAGCCATTAGCAGCTGCATGGGGTGCTATGAGAATGATCGTAACAATCGGTTGGGCAATCTAC MVAATVFFFMERNTVAAGWKTSVTVAGLVTGVAFIHYMYMRDVWVMTGDSPTVYRYIDWLITVPLQMIEFYLTLAAVKKIPGAIFWRLLIGSLVMLIGGYLGEAGYINAMLGFIVGMAGWIYILYEVFSGEAGKIAAKTGNKPLAAAWGAMRMIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCCGCTACTGTTTTCTTCTTCATGGAAAGAAATACTGTTGCAGCA---GGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTA------------------------------ATGACT---------------------GGAGATTCTCCAACAGTATATAGATATATTGATTGG------------------------TTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAACTCTAGCAGCA---------GTT---AAGAAAATCCCAGGA---GCAATC------------------------------------TTCTGGAGA---TTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ATGCTTGGT---TTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCTGGAAAAATTGCAGCTAAA------ACT---GGAAACAAGCCATTA---GCA---GCT---GCA---TGG---GGT---GCTATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGTTGG---------GCAATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERNTVAA-GWKTSVTVAGLVTGVAFIHYMYMRDVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLTLAA---V-KKIPG-AI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------MLG-FIVGMAGWIYILYEV-----F--S-GEAGKIAAK--T-GNKPL-A-A-A-W-G-AM-RMIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU915826 [IV-Alpha8-SAR11/IMCC9063] PF12057_env_samples_EU915826 gi|229358534|gb|EU915826| Uncultured organism clone PF12057 putative proteorhodopsin gene, partial cds Uncultured organism clone PF12057 putative proteorhodopsin gene, partial cds EU915826 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTCGCCGCTACTGTATTCTTCTTCATGGAAAGAAATACTGTTGCAGCAGGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTAATGACTGGAGATTCTCCAACAGTATATAGATATATTGATTGGTTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAACTCTAGCAGCAGTTAAGAAAATCCCAGGAGCAATCTTCTGGAGATTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAAGCAGGTTACATCAATGCTATGCTTGGTTTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCTGGTGAAGCTGGAAAAATTGCAGCTAAAACTGGAAACAAGCCATTAGCAGCTGCATGGGGTGCTATGAGAATGATCGTAACAATCGGTTGGGCAATCTAC MLAATVFFFMERNTVAAGWKTSVTVAGLVTGVAFIHYMYMRDVWVMTGDSPTVYRYIDWLITVPLQMIEFYLTLAAVKKIPGAIFWRLLIGSLVMLIGGYLGEAGYINAMLGFIVGMAGWIYILYEVFSGEAGKIAAKTGNKPLAAAWGAMRMIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTCGCCGCTACTGTATTCTTCTTCATGGAAAGAAATACTGTTGCAGCA---GGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTA------------------------------ATGACT---------------------GGAGATTCTCCAACAGTATATAGATATATTGATTGG------------------------TTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAACTCTAGCAGCA---------GTT---AAGAAAATCCCAGGA---GCAATC------------------------------------TTCTGGAGA---TTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ATGCTTGGT---TTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCTGGAAAAATTGCAGCTAAA------ACT---GGAAACAAGCCATTA---GCA---GCT---GCA---TGG---GGT---GCTATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGTTGG---------GCAATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFMERNTVAA-GWKTSVTVAGLVTGVAFIHYMYMRDVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLTLAA---V-KKIPG-AI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------MLG-FIVGMAGWIYILYEV-----F--S-GEAGKIAAK--T-GNKPL-A-A-A-W-G-AM-RMIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ926997 [IV-Alpha8-SAR11/IMCC9063] clone_PF91117_DQ926997 gi|116294109|gb|DQ926997| Uncultured bacterium clone PF91117 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF91117 putative proteorhodopsin gene, partial cds. DQ926997 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGCTGGCCGCTACTGTGTTCTTCTTCATGGAAAGAAATACTGTTGCAGCAGACTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTAATGACTGGAGATTCTCCAACAGTATATAGATATATTGATTGGTTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAACTCTAGCAGCAGTTAAGAAAATCCCAGGAGCAATCTTCTGGAGATTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAAGCAGGTTACATCAGTGCTATGCTTGGTTTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCTGGTGAAGCTGGAAAAATTGCAGCTAAAACTGGAAACAAGCCATTAGCAGCTGCATGGGGTGCTATGAGAATGATCGTAACAATCGGTTGGGCCATCTACCCA MLAATVFFFMERNTVAADWKTSVTVAGLVTGVAFIHYMYMRDVWVMTGDSPTVYRYIDWLITVPLQMIEFYLTLAAVKKIPGAIFWRLLIGSLVMLIGGYLGEAGYISAMLGFIVGMAGWIYILYEVFSGEAGKIAAKTGNKPLAAAWGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGTGTTCTTCTTCATGGAAAGAAATACTGTTGCAGCA---GACTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTA------------------------------ATGACT---------------------GGAGATTCTCCAACAGTATATAGATATATTGATTGG------------------------TTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAACTCTAGCAGCA---------GTT---AAGAAAATCCCAGGA---GCAATC------------------------------------TTCTGGAGA---TTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AGTGCT------------------ATGCTTGGT---TTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCTGGAAAAATTGCAGCTAAA------ACT---GGAAACAAGCCATTA---GCA---GCT---GCA---TGG---GGT---GCTATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGTTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFMERNTVAA-DWKTSVTVAGLVTGVAFIHYMYMRDVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLTLAA---V-KKIPG-AI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------SA------MLG-FIVGMAGWIYILYEV-----F--S-GEAGKIAAK--T-GNKPL-A-A-A-W-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ927005 [IV-Alpha8-SAR11/IMCC9063] clone_PF91133_DQ927005 gi|116294125|gb|DQ927005| Uncultured bacterium clone PF91133 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF91133 putative proteorhodopsin gene, partial cds. DQ927005 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGGTTGCCGCTACTGCTTTCTTCTTCATGGAAAGAAATACTGTTGCAGCAGGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCACTCACTACATGTACATGAGAGATGTATGGGTAATGACTGGAGATTCTCCAACAGTATATAGATATATTGATTGGTTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAACTCTAGCAGCAGTTAAGAAAATCCCAGGAGCAATCTTCTGGAGATTATTGATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAAGCAGGTTACATCAATGCTATGCTTGGTTTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTACTCTCTGGTGAAGCTGGAAAAATTGCAGCTAAAACTGGAAACAAGCCATTAGCAGCTGCATGGGGTGCTATGAGAATGATCGTAACAATCGGCTGGGCAATCTACCCA MVAATAFFFMERNTVAAGWKTSVTVAGLVTGVAFTHYMYMRDVWVMTGDSPTVYRYIDWLITVPLQMIEFYLTLAAVKKIPGAIFWRLLIGSLVMLIGGYLGEAGYINAMLGFIVGMAGWIYILYEVLSGEAGKIAAKTGNKPLAAAWGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGCTTTCTTCTTCATGGAAAGAAATACTGTTGCAGCA---GGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCACTCACTACATGTACATGAGAGATGTATGGGTA------------------------------ATGACT---------------------GGAGATTCTCCAACAGTATATAGATATATTGATTGG------------------------TTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAACTCTAGCAGCA---------GTT---AAGAAAATCCCAGGA---GCAATC------------------------------------TTCTGGAGA---TTATTGATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ATGCTTGGT---TTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------CTC------TCT---GGTGAAGCTGGAAAAATTGCAGCTAAA------ACT---GGAAACAAGCCATTA---GCA---GCT---GCA---TGG---GGT---GCTATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGCTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMERNTVAA-GWKTSVTVAGLVTGVAFTHYMYMRDVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLTLAA---V-KKIPG-AI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------MLG-FIVGMAGWIYILYEV-----L--S-GEAGKIAAK--T-GNKPL-A-A-A-W-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU915824 [IV-Alpha8-SAR11/IMCC9063] PF12054_env_samples_EU915824 gi|229358530|gb|EU915824| Uncultured microorganism clone PF12054 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF12054 putative proteorhodopsin gene, partial cds EU915824 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTAGCCGCTACTGCTTTCTTCTTCATGGAAAGAAATACTGTTGCAGCAGGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTAATGACTGGAGATTCTCCAACAGTATATAGATATATTGATTGGTTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAACTCTAGCAGCAGTTAAGAAAATCCCAGGAGCAATCTTCTGGAGATTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAAGCAGGTTACATCAATGCTATGCTTGGTTTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCTGGTGAAGCTGGAAAAATTGCAGCTAAAACTGGAAACAAGCCATTAGCAGCTGCATGGGGTGCTATGAGAATGATCGTAACAATCGGGTGGGCAATCTAC MVAATAFFFMERNTVAAGWKTSVTVAGLVTGVAFIHYMYMRDVWVMTGDSPTVYRYIDWLITVPLQMIEFYLTLAAVKKIPGAIFWRLLIGSLVMLIGGYLGEAGYINAMLGFIVGMAGWIYILYEVFSGEAGKIAAKTGNKPLAAAWGAMRMIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGCTTTCTTCTTCATGGAAAGAAATACTGTTGCAGCA---GGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTA------------------------------ATGACT---------------------GGAGATTCTCCAACAGTATATAGATATATTGATTGG------------------------TTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAACTCTAGCAGCA---------GTT---AAGAAAATCCCAGGA---GCAATC------------------------------------TTCTGGAGA---TTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ATGCTTGGT---TTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCTGGAAAAATTGCAGCTAAA------ACT---GGAAACAAGCCATTA---GCA---GCT---GCA---TGG---GGT---GCTATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGGTGG---------GCAATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMERNTVAA-GWKTSVTVAGLVTGVAFIHYMYMRDVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLTLAA---V-KKIPG-AI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------MLG-FIVGMAGWIYILYEV-----F--S-GEAGKIAAK--T-GNKPL-A-A-A-W-G-AM-RMIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU915792 [IV-Alpha8-SAR11/IMCC9063] PF97508_env_samples_EU915792 gi|229358466|gb|EU915792| Uncultured microorganism clone PF97508 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF97508 putative proteorhodopsin gene, partial cds EU915792 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTTGCCGCTACTGTGTTCTTCTTCATGGAAAGAAATACTGTTGCAGCAGGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTAATGACTGGAGATTCTCCAACAGTATATAGATATATTGATTGGTTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAACTCTAGCAGCAGTTAAGAAAATCCCAGGAGCAATCTTCTGGAGATTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAAGCAGGTTACATCAATGCTATGCTTGGTTTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCTGGTGAAGCTGGAAAAATTGCAGCTAAAACTGGAAACAAGCCATTAGCAACTGCATGGGGTGCTATGAGAATGATCGTAACAATCGGGTGGGCGATCTAC MLAATVFFFMERNTVAAGWKTSVTVAGLVTGVAFIHYMYMRDVWVMTGDSPTVYRYIDWLITVPLQMIEFYLTLAAVKKIPGAIFWRLLIGSLVMLIGGYLGEAGYINAMLGFIVGMAGWIYILYEVFSGEAGKIAAKTGNKPLATAWGAMRMIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACTGTGTTCTTCTTCATGGAAAGAAATACTGTTGCAGCA---GGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTA------------------------------ATGACT---------------------GGAGATTCTCCAACAGTATATAGATATATTGATTGG------------------------TTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAACTCTAGCAGCA---------GTT---AAGAAAATCCCAGGA---GCAATC------------------------------------TTCTGGAGA---TTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ATGCTTGGT---TTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCTGGAAAAATTGCAGCTAAA------ACT---GGAAACAAGCCATTA---GCA---ACT---GCA---TGG---GGT---GCTATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGGTGG---------GCGATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFMERNTVAA-GWKTSVTVAGLVTGVAFIHYMYMRDVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLTLAA---V-KKIPG-AI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------MLG-FIVGMAGWIYILYEV-----F--S-GEAGKIAAK--T-GNKPL-A-T-A-W-G-AM-RMIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU915721 [IV-Alpha8-SAR11/IMCC9063] APF9034_env_samples_EU915721 gi|229358324|gb|EU915721| Uncultured organism clone APF9034 putative proteorhodopsin gene, partial cds Uncultured organism clone APF9034 putative proteorhodopsin gene, partial cds EU915721 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 31-DEC-2009 #na ocean_sample_at_75_m_depth Atlantic Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTGGCCGCTACTGTCTTCTTCTTCATGGAAAGAAATACTGTTGCAGCAGGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCGCTACATGTACATGAGAGATGTATGGGTAATGACTGGAGATTCTCCAACAGTATATAGATATATTGATTGGTTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAATTCTAGCAGCAGTTAAGAAAATCCCAGGAGCAATCTTCTGGAGATTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAAGCAGGTTACATCAATGCTATGCTTGGTTTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCTGGTGAAGCTGGAAAAATTGCAGCTAAAACTGGAAACAAGCCATTAGCAACTGCATGGGGTGCTATGAGAATGATCGTAACAATCGGGTGGGCCATCTAT MLAATVFFFMERNTVAAGWKTSVTVAGLVTGVAFIRYMYMRDVWVMTGDSPTVYRYIDWLITVPLQMIEFYLILAAVKKIPGAIFWRLLIGSLVMLIGGYLGEAGYINAMLGFIVGMAGWIYILYEVFSGEAGKIAAKTGNKPLATAWGAMRMIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGTCTTCTTCTTCATGGAAAGAAATACTGTTGCAGCA---GGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCGCTACATGTACATGAGAGATGTATGGGTA------------------------------ATGACT---------------------GGAGATTCTCCAACAGTATATAGATATATTGATTGG------------------------TTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAATTCTAGCAGCA---------GTT---AAGAAAATCCCAGGA---GCAATC------------------------------------TTCTGGAGA---TTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ATGCTTGGT---TTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCTGGAAAAATTGCAGCTAAA------ACT---GGAAACAAGCCATTA---GCA---ACT---GCA---TGG---GGT---GCTATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGGTGG---------GCCATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFMERNTVAA-GWKTSVTVAGLVTGVAFIRYMYMRDVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-KKIPG-AI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------MLG-FIVGMAGWIYILYEV-----F--S-GEAGKIAAK--T-GNKPL-A-T-A-W-G-AM-RMIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EF088514 [IV-Alpha8-SAR11/IMCC9063] clone_APF9034_EF088514 gi|126843245|gb|EF088514| Uncultured bacterium clone APF9034 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone APF9034 putative proteorhodopsin gene, partial cds. EF088514 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na 75m water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGCTGGCCGCTACTGTCTTCTTCTTCATGGAAAGAAATACTGTTGCAGCAGGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCGCTACATGTACATGAGAGATGTATGGGTAATGACTGGAGATTCTCCAACAGTATATAGATATATTGATTGGTTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAATTCTAGCAGCAGTTAAGAAAATCCCAGGAGCAATCTTCTGGAGATTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAAGCAGGTTACATCAATGCTATGCTTGGTTTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCTGGTGAAGCTGGAAAAATTGCAGCTAAAACTGGAAACAAGCCATTAGCAACTGCATGGGGTGCTATGAGAATGATCGTAACAATCGGGTGGGCCATCTATCCA MLAATVFFFMERNTVAAGWKTSVTVAGLVTGVAFIRYMYMRDVWVMTGDSPTVYRYIDWLITVPLQMIEFYLILAAVKKIPGAIFWRLLIGSLVMLIGGYLGEAGYINAMLGFIVGMAGWIYILYEVFSGEAGKIAAKTGNKPLATAWGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGTCTTCTTCTTCATGGAAAGAAATACTGTTGCAGCA---GGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCGCTACATGTACATGAGAGATGTATGGGTA------------------------------ATGACT---------------------GGAGATTCTCCAACAGTATATAGATATATTGATTGG------------------------TTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAATTCTAGCAGCA---------GTT---AAGAAAATCCCAGGA---GCAATC------------------------------------TTCTGGAGA---TTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ATGCTTGGT---TTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCTGGAAAAATTGCAGCTAAA------ACT---GGAAACAAGCCATTA---GCA---ACT---GCA---TGG---GGT---GCTATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFMERNTVAA-GWKTSVTVAGLVTGVAFIRYMYMRDVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-KKIPG-AI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------MLG-FIVGMAGWIYILYEV-----F--S-GEAGKIAAK--T-GNKPL-A-T-A-W-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ926994 [IV-Alpha8-SAR11/IMCC9063] clone_PF91114_DQ926994 gi|116294103|gb|DQ926994| Uncultured bacterium clone PF91114 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF91114 putative proteorhodopsin gene, partial cds. DQ926994 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGGTGGCCGCTACTGTTTTCTTCTTCATGGAAAGAAATACTGTTGCAGCAGGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTAATGACTGGAGATTCTCCAACAGTATATAGATATATTGATTGGTTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAATTCTAGCAGCAGTTAAGAAAATCCCAGGAGCAATTTTCTGGAGATTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAAGCAGGTTACATCAATGCTATGCTTGGTTTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCTGGTGAGGCTGGAAAAATTGCAGCTAAAACTGGAAACAAGCCATTAGCAACTGCATGGGGTGCTATGAGAATGATCGTAACAATCGGTTGGGCCATATACCCA MVAATVFFFMERNTVAAGWKTSVTVAGLVTGVAFIHYMYMRDVWVMTGDSPTVYRYIDWLITVPLQMIEFYLILAAVKKIPGAIFWRLLIGSLVMLIGGYLGEAGYINAMLGFIVGMAGWIYILYEVFSGEAGKIAAKTGNKPLATAWGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTTTTCTTCTTCATGGAAAGAAATACTGTTGCAGCA---GGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTA------------------------------ATGACT---------------------GGAGATTCTCCAACAGTATATAGATATATTGATTGG------------------------TTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAATTCTAGCAGCA---------GTT---AAGAAAATCCCAGGA---GCAATT------------------------------------TTCTGGAGA---TTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ATGCTTGGT---TTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCT---GGTGAGGCTGGAAAAATTGCAGCTAAA------ACT---GGAAACAAGCCATTA---GCA---ACT---GCA---TGG---GGT---GCTATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGTTGG---------GCCATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERNTVAA-GWKTSVTVAGLVTGVAFIHYMYMRDVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-KKIPG-AI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------MLG-FIVGMAGWIYILYEV-----F--S-GEAGKIAAK--T-GNKPL-A-T-A-W-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ927020 [IV-Alpha8-SAR11/IMCC9063] clone_AT06014_DQ927020 gi|116294155|gb|DQ927020| Uncultured bacterium clone AT06014 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT06014 putative proteorhodopsin gene, partial cds. DQ927020 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGGTAGCCGCTACTGTTTTCTTCTTCATGGAAAGAAATACTGTTGCAGCAGGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTAATGACTGGAGATTCACCAACAGTATATAGATATATTGATTGGTTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAATTCTAGCAGCAGTTAAGAAAATCCCAGGAGCAATCTTCTGGAGATTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAAGCAGGTTACATCAATGCTATGCTTGGTTTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCTGGTGAAGCTGGAAAAATTGCAGCTAAAACTGGAAACAAGCCATTAGCAACTGCATGGGGTGCTATGAGAATGATCGTAACAATCGGATGGGCCATCTACCCA MVAATVFFFMERNTVAAGWKTSVTVAGLVTGVAFIHYMYMRDVWVMTGDSPTVYRYIDWLITVPLQMIEFYLILAAVKKIPGAIFWRLLIGSLVMLIGGYLGEAGYINAMLGFIVGMAGWIYILYEVFSGEAGKIAAKTGNKPLATAWGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTTTTCTTCTTCATGGAAAGAAATACTGTTGCAGCA---GGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTA------------------------------ATGACT---------------------GGAGATTCACCAACAGTATATAGATATATTGATTGG------------------------TTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAATTCTAGCAGCA---------GTT---AAGAAAATCCCAGGA---GCAATC------------------------------------TTCTGGAGA---TTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ATGCTTGGT---TTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCTGGAAAAATTGCAGCTAAA------ACT---GGAAACAAGCCATTA---GCA---ACT---GCA---TGG---GGT---GCTATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGATGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERNTVAA-GWKTSVTVAGLVTGVAFIHYMYMRDVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-KKIPG-AI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------MLG-FIVGMAGWIYILYEV-----F--S-GEAGKIAAK--T-GNKPL-A-T-A-W-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EF088623 [IV-Alpha8-SAR11/IMCC9063] PF13024_env_samples_EF088623 gi|126843496|gb|EF088623| Uncultured bacterium clone PF13024 putative proteorhodopsin gene, partial cds Uncultured bacterium clone PF13024 putative proteorhodopsin gene, partial cds EF088623 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na surface_water_sample Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na CTATTAGCGGCTACTGTATTCTTCTTTATGGAAAGAAATACTGTTGCAGCAGGCTGGAAAACTTCAGTAACAGTAGCTGGTCTAGTAACTGGTGTTGCATTTGTTCATTACATGTACATGAGAGATGTATGGGTAATAACAGGAGAATCTCCAACAGTATATAGATATATTGATTGGTTAATCACTGTACCGTTACAGATGATTGAGTTCTATTTAATTCTAGCAGCAGTTAAGAAAATCCCAGGTGGAATATTCTGGAGATTATTAATTGGATCGCTTGTGATGTTAATCGGTGGATACTTAGGAGAAGCAGATTATATCCCAGCTATGGTAGGTTTCATAGTAGGTATGGCTGGATGGATCTACATTTTATATGAAGTATTCTCTGGTGAAGCTGGAAAAATTGCAGCTAAAACTGGGAACAAGCCATTAGCAACTGCATGGGGCGCTATGAGAATGATCGTAACAATCGGTTGGGCAATCTACCCA LLAATVFFFMERNTVAAGWKTSVTVAGLVTGVAFVHYMYMRDVWVITGESPTVYRYIDWLITVPLQMIEFYLILAAVKKIPGGIFWRLLIGSLVMLIGGYLGEADYIPAMVGFIVGMAGWIYILYEVFSGEAGKIAAKTGNKPLATAWGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTTATGGAAAGAAATACTGTTGCAGCA---GGCTGGAAAACTTCAGTAACAGTAGCTGGTCTAGTAACTGGTGTTGCATTTGTTCATTACATGTACATGAGAGATGTATGGGTA------------------------------ATAACA---------------------GGAGAATCTCCAACAGTATATAGATATATTGATTGG------------------------TTAATCACTGTACCGTTACAGATGATTGAGTTCTATTTAATTCTAGCAGCA---------GTT---AAGAAAATCCCAGGT---GGAATA------------------------------------TTCTGGAGA---TTATTAATTGGATCGCTTGTGATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GAT------TAT---------------------------------ATC------------------------------------------------------------------CCAGCT------------------ATGGTAGGT---TTCATAGTAGGTATGGCTGGATGGATCTACATTTTATATGAAGTA---------------TTC------TCT---GGTGAAGCTGGAAAAATTGCAGCTAAA------ACT---GGGAACAAGCCATTA---GCA---ACT---GCA---TGG---GGC---GCTATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGTTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFMERNTVAA-GWKTSVTVAGLVTGVAFVHYMYMRDVWV----------IT-------GESPTVYRYIDW--------LITVPLQMIEFYLILAA---V-KKIPG-GI------------FWR-LLIGSLVMLIGGYLGE---A------D--Y-----------I----------------------PA------MVG-FIVGMAGWIYILYEV-----F--S-GEAGKIAAK--T-GNKPL-A-T-A-W-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU915738 [IV-Alpha8-SAR11/IMCC9063] APF9018_env_samples_EU915738 gi|229358358|gb|EU915738| Uncultured microorganism clone APF9018 putative proteorhodopsin gene, partial cds Uncultured microorganism clone APF9018 putative proteorhodopsin gene, partial cds EU915738 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample_at_75_m_depth Atlantic Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTATTAGCGGCTACTGTATTCTTCTTCATGGAAAGAAATACTGTTGCAGCAGGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTAATGACTGGAGATTCTCCAACAGTATGTAGATATATTGATTGGTTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAATTCTAGCAGCAGTTAAGAAAATCCCAGGAGCAATCTTCTGGAGATTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAAGCAGGTTACATCAATGCTATGCTTGGTTTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCTGGTGAAGCTGGAAAAATTGCAGCAAAAACTGGAAACAAGCCGTTAGCAACTGCATGGGGTGCTATGAGAATGATCGTAACAATCGGCTGGGCTATTTAC LLAATVFFFMERNTVAAGWKTSVTVAGLVTGVAFIHYMYMRDVWVMTGDSPTVCRYIDWLITVPLQMIEFYLILAAVKKIPGAIFWRLLIGSLVMLIGGYLGEAGYINAMLGFIVGMAGWIYILYEVFSGEAGKIAAKTGNKPLATAWGAMRMIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTCATGGAAAGAAATACTGTTGCAGCA---GGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTA------------------------------ATGACT---------------------GGAGATTCTCCAACAGTATGTAGATATATTGATTGG------------------------TTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAATTCTAGCAGCA---------GTT---AAGAAAATCCCAGGA---GCAATC------------------------------------TTCTGGAGA---TTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ATGCTTGGT---TTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCTGGAAAAATTGCAGCAAAA------ACT---GGAAACAAGCCGTTA---GCA---ACT---GCA---TGG---GGT---GCTATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGCTGG---------GCTATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFMERNTVAA-GWKTSVTVAGLVTGVAFIHYMYMRDVWV----------MT-------GDSPTVCRYIDW--------LITVPLQMIEFYLILAA---V-KKIPG-AI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------MLG-FIVGMAGWIYILYEV-----F--S-GEAGKIAAK--T-GNKPL-A-T-A-W-G-AM-RMIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EF088531 [IV-Alpha8-SAR11/IMCC9063] clone_APF9018_EF088531 gi|126843279|gb|EF088531| Uncultured bacterium clone APF9018 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone APF9018 putative proteorhodopsin gene, partial cds. EF088531 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na 75m water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na CTATTAGCGGCTACTGTATTCTTCTTCATGGAAAGAAATACTGTTGCAGCAGGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTAATGACTGGAGATTCTCCAACAGTATGTAGATATATTGATTGGTTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAATTCTAGCAGCAGTTAAGAAAATCCCAGGAGCAATCTTCTGGAGATTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAAGCAGGTTACATCAATGCTATGCTTGGTTTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCTGGTGAAGCTGGAAAAATTGCAGCAAAAACTGGAAACAAGCCGTTAGCAACTGCATGGGGTGCTATGAGAATGATCGTAACAATCGGCTGGGCTATTTACCCA LLAATVFFFMERNTVAAGWKTSVTVAGLVTGVAFIHYMYMRDVWVMTGDSPTVCRYIDWLITVPLQMIEFYLILAAVKKIPGAIFWRLLIGSLVMLIGGYLGEAGYINAMLGFIVGMAGWIYILYEVFSGEAGKIAAKTGNKPLATAWGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTCATGGAAAGAAATACTGTTGCAGCA---GGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTA------------------------------ATGACT---------------------GGAGATTCTCCAACAGTATGTAGATATATTGATTGG------------------------TTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAATTCTAGCAGCA---------GTT---AAGAAAATCCCAGGA---GCAATC------------------------------------TTCTGGAGA---TTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ATGCTTGGT---TTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCTGGAAAAATTGCAGCAAAA------ACT---GGAAACAAGCCGTTA---GCA---ACT---GCA---TGG---GGT---GCTATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGCTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFMERNTVAA-GWKTSVTVAGLVTGVAFIHYMYMRDVWV----------MT-------GDSPTVCRYIDW--------LITVPLQMIEFYLILAA---V-KKIPG-AI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------MLG-FIVGMAGWIYILYEV-----F--S-GEAGKIAAK--T-GNKPL-A-T-A-W-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU915763 [IV-Alpha8-SAR11/IMCC9063] PF75116_env_samples_EU915763 gi|229358408|gb|EU915763| Uncultured microorganism clone PF75116 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF75116 putative proteorhodopsin gene, partial cds EU915763 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTATTAGCGGCTACTGTATTCTTCTTCATGGAAAGAAATACTGTTGCAGCAGGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTAATGACTGGAGATTCTCCAACAGTATATAGATATATTGATTGGTTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAATTCTAGCAGCAGTTAAGAAAATCCCAGGAGCAATCTTCTGGAGATTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAAGCAGGTTACATCAATGCTATGCTTGGTTTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCTGGTGAAGCTGGAAAAATTGCAGCTAAAACTGGAAACAAGCCATTAGCAACTGCATGGGGTGCTATGAGAATGATCGTAACAATCGGGTGGGCTATTTAT LLAATVFFFMERNTVAAGWKTSVTVAGLVTGVAFIHYMYMRDVWVMTGDSPTVYRYIDWLITVPLQMIEFYLILAAVKKIPGAIFWRLLIGSLVMLIGGYLGEAGYINAMLGFIVGMAGWIYILYEVFSGEAGKIAAKTGNKPLATAWGAMRMIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTCATGGAAAGAAATACTGTTGCAGCA---GGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTA------------------------------ATGACT---------------------GGAGATTCTCCAACAGTATATAGATATATTGATTGG------------------------TTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAATTCTAGCAGCA---------GTT---AAGAAAATCCCAGGA---GCAATC------------------------------------TTCTGGAGA---TTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ATGCTTGGT---TTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCTGGAAAAATTGCAGCTAAA------ACT---GGAAACAAGCCATTA---GCA---ACT---GCA---TGG---GGT---GCTATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGGTGG---------GCTATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFMERNTVAA-GWKTSVTVAGLVTGVAFIHYMYMRDVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-KKIPG-AI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------MLG-FIVGMAGWIYILYEV-----F--S-GEAGKIAAK--T-GNKPL-A-T-A-W-G-AM-RMIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU915858 [IV-Alpha8-SAR11/IMCC9063] APF1120_env_samples_EU915858 gi|229358598|gb|EU915858| Uncultured microorganism clone APF1120 putative proteorhodopsin gene, partial cds Uncultured microorganism clone APF1120 putative proteorhodopsin gene, partial cds EU915858 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample_at_200_m_depth Atlantic Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na GTATTAGCGTCTACTGTATTCTTCTTCATGGAAAGAAATACTGTTGCAGCAGGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTAATGACTGGAGATTCTCCAACAGTATATAGATATATTGATTGGTTAATAACTGTACCATTACAGATGATCGAGTTTTACTTAATTCTAGCAGCAGTTAAGAAAATCCCAGGAGCAATCTTCTGGAGATTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAAGCAGGTTACATCAATGCTATGCTTGGTTTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCTGGTGAAGCTGGAAAAATTGCAGCTAAAACTGGAAACAAGCCATTAGCAACTGCATGGGGCGCTATGAGAATGATCGTTACAATCGGTTGGGCTATATAT VLASTVFFFMERNTVAAGWKTSVTVAGLVTGVAFIHYMYMRDVWVMTGDSPTVYRYIDWLITVPLQMIEFYLILAAVKKIPGAIFWRLLIGSLVMLIGGYLGEAGYINAMLGFIVGMAGWIYILYEVFSGEAGKIAAKTGNKPLATAWGAMRMIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGTCTACTGTATTCTTCTTCATGGAAAGAAATACTGTTGCAGCA---GGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTA------------------------------ATGACT---------------------GGAGATTCTCCAACAGTATATAGATATATTGATTGG------------------------TTAATAACTGTACCATTACAGATGATCGAGTTTTACTTAATTCTAGCAGCA---------GTT---AAGAAAATCCCAGGA---GCAATC------------------------------------TTCTGGAGA---TTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ATGCTTGGT---TTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCTGGAAAAATTGCAGCTAAA------ACT---GGAAACAAGCCATTA---GCA---ACT---GCA---TGG---GGC---GCTATG---AGAATGATCGTTACAATC---------------------------------------------------------------GGTTGG---------GCTATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------VLASTVFFFMERNTVAA-GWKTSVTVAGLVTGVAFIHYMYMRDVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-KKIPG-AI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------MLG-FIVGMAGWIYILYEV-----F--S-GEAGKIAAK--T-GNKPL-A-T-A-W-G-AM-RMIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EF088544 [IV-Alpha8-SAR11/IMCC9063] clone_APF1120_EF088544 gi|126843312|gb|EF088544| Uncultured bacterium clone APF1120 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone APF1120 putative proteorhodopsin gene, partial cds. EF088544 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na 200m water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na GTATTAGCGTCTACTGTATTCTTCTTCATGGAAAGAAATACTGTTGCAGCAGGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTAATGACTGGAGATTCTCCAACAGTATATAGATATATTGATTGGTTAATAACTGTACCATTACAGATGATCGAGTTTTACTTAATTCTAGCAGCAGTTAAGAAAATCCCAGGAGCAATCTTCTGGAGATTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAAGCAGGTTACATCAATGCTATGCTTGGTTTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCTGGTGAAGCTGGAAAAATTGCAGCTAAAACTGGAAACAAGCCATTAGCAACTGCATGGGGCGCTATGAGAATGATCGTTACAATCGGTTGGGCTATATATCCA VLASTVFFFMERNTVAAGWKTSVTVAGLVTGVAFIHYMYMRDVWVMTGDSPTVYRYIDWLITVPLQMIEFYLILAAVKKIPGAIFWRLLIGSLVMLIGGYLGEAGYINAMLGFIVGMAGWIYILYEVFSGEAGKIAAKTGNKPLATAWGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGTCTACTGTATTCTTCTTCATGGAAAGAAATACTGTTGCAGCA---GGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTA------------------------------ATGACT---------------------GGAGATTCTCCAACAGTATATAGATATATTGATTGG------------------------TTAATAACTGTACCATTACAGATGATCGAGTTTTACTTAATTCTAGCAGCA---------GTT---AAGAAAATCCCAGGA---GCAATC------------------------------------TTCTGGAGA---TTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ATGCTTGGT---TTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCTGGAAAAATTGCAGCTAAA------ACT---GGAAACAAGCCATTA---GCA---ACT---GCA---TGG---GGC---GCTATG---AGAATGATCGTTACAATC---------------------------------------------------------------GGTTGG---------GCTATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------VLASTVFFFMERNTVAA-GWKTSVTVAGLVTGVAFIHYMYMRDVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-KKIPG-AI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------MLG-FIVGMAGWIYILYEV-----F--S-GEAGKIAAK--T-GNKPL-A-T-A-W-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU915768 [IV-Alpha8-SAR11/IMCC9063] PF75132_env_samples_EU915768 gi|229358418|gb|EU915768| Uncultured microorganism clone PF75132 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF75132 putative proteorhodopsin gene, partial cds EU915768 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na GTATTAGCGGCTACTGTATTCTTCTTCATGGAAAGAAATACTGTTGCAGCAGGCTGGAAAACTTCAGTGACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTAATGACTGGAGATTCTCCAACAGTATATAGATATATTGATTGGTTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAATTCTAGCAGCAGTTAAGAAAATCCCAGGAGCAATCTTCTGGAGATTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAAGCAGGTTACATCAATGCTATGCTTGGTTTTATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCTGGTGAAGCTGGAAAAATTGCAGCTAAAACTGGAAACAAGCCATTAGCAACTGCATGGGGTGCTATGAGAATGATCGTAACAATCGGATGGGCAATTTAT VLAATVFFFMERNTVAAGWKTSVTVAGLVTGVAFIHYMYMRDVWVMTGDSPTVYRYIDWLITVPLQMIEFYLILAAVKKIPGAIFWRLLIGSLVMLIGGYLGEAGYINAMLGFIVGMAGWIYILYEVFSGEAGKIAAKTGNKPLATAWGAMRMIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGGCTACTGTATTCTTCTTCATGGAAAGAAATACTGTTGCAGCA---GGCTGGAAAACTTCAGTGACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTA------------------------------ATGACT---------------------GGAGATTCTCCAACAGTATATAGATATATTGATTGG------------------------TTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAATTCTAGCAGCA---------GTT---AAGAAAATCCCAGGA---GCAATC------------------------------------TTCTGGAGA---TTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ATGCTTGGT---TTTATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCTGGAAAAATTGCAGCTAAA------ACT---GGAAACAAGCCATTA---GCA---ACT---GCA---TGG---GGT---GCTATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGATGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------VLAATVFFFMERNTVAA-GWKTSVTVAGLVTGVAFIHYMYMRDVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-KKIPG-AI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------MLG-FIVGMAGWIYILYEV-----F--S-GEAGKIAAK--T-GNKPL-A-T-A-W-G-AM-RMIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ927024 [IV-Alpha8-SAR11/IMCC9063] clone_AT06018_DQ927024 gi|116294163|gb|DQ927024| Uncultured bacterium clone AT06018 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT06018 putative proteorhodopsin gene, partial cds. DQ927024 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na GTATTAGCGGCTACTGTATTCTTCTTCATGGAAAGAAATACTGTTGCAGCAGGCTGGAAGACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTAATGACTGGAGATTCTCCAACAGTATATAGATATATTGATTGGTTAATTACTGTACCATTACAGATGATCGAGTTTTACTTAATTCTAGCAGCAGTTAAGAAAATCCCAGGAGCAATCTTCTGGAGATTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAAGCAGGTTACATCAATGCTATGCTTGGTTTTATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCTGGTGAAGCTGGAAAAATTGCAGCTAAAACTGGAAACAAGCCATTAGCAACTGCATGGGGTGCTATGAGAATGATCGTAACAATCGGGTGGGCAATTTACCCA VLAATVFFFMERNTVAAGWKTSVTVAGLVTGVAFIHYMYMRDVWVMTGDSPTVYRYIDWLITVPLQMIEFYLILAAVKKIPGAIFWRLLIGSLVMLIGGYLGEAGYINAMLGFIVGMAGWIYILYEVFSGEAGKIAAKTGNKPLATAWGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGGCTACTGTATTCTTCTTCATGGAAAGAAATACTGTTGCAGCA---GGCTGGAAGACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTA------------------------------ATGACT---------------------GGAGATTCTCCAACAGTATATAGATATATTGATTGG------------------------TTAATTACTGTACCATTACAGATGATCGAGTTTTACTTAATTCTAGCAGCA---------GTT---AAGAAAATCCCAGGA---GCAATC------------------------------------TTCTGGAGA---TTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ATGCTTGGT---TTTATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCTGGAAAAATTGCAGCTAAA------ACT---GGAAACAAGCCATTA---GCA---ACT---GCA---TGG---GGT---GCTATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGGTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------VLAATVFFFMERNTVAA-GWKTSVTVAGLVTGVAFIHYMYMRDVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-KKIPG-AI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------MLG-FIVGMAGWIYILYEV-----F--S-GEAGKIAAK--T-GNKPL-A-T-A-W-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ927030 [IV-Alpha8-SAR11/IMCC9063] clone_AT06024_DQ927030 gi|116294175|gb|DQ927030| Uncultured bacterium clone AT06024 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT06024 putative proteorhodopsin gene, partial cds. DQ927030 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na CTATTAGCGGCTACTGTATTCTTCTTCATGGAAAGAAATACTGTTGCAGCAGGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTAATGACTGGAGATTCTCCAACAGTATATAGATATATTGATTGGTTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAATTCTAGCAGCAGTTAAGAAAATCCCAGGAGCAATCTTCTGGAGATTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAAGCAGGTTACATCAATGCTATGCTTGGTTTCATAGTTGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCTGGTGAAGCTGGAAAAATTGCAGCTAAAACTGGAAACAAGCCATTAGCAACTGCATGGGGTGCTATGAGAATGATCGTAACAATTGGTTGGGCCATTTATCCA LLAATVFFFMERNTVAAGWKTSVTVAGLVTGVAFIHYMYMRDVWVMTGDSPTVYRYIDWLITVPLQMIEFYLILAAVKKIPGAIFWRLLIGSLVMLIGGYLGEAGYINAMLGFIVGMAGWIYILYEVFSGEAGKIAAKTGNKPLATAWGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTCATGGAAAGAAATACTGTTGCAGCA---GGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTA------------------------------ATGACT---------------------GGAGATTCTCCAACAGTATATAGATATATTGATTGG------------------------TTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAATTCTAGCAGCA---------GTT---AAGAAAATCCCAGGA---GCAATC------------------------------------TTCTGGAGA---TTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ATGCTTGGT---TTCATAGTTGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCTGGAAAAATTGCAGCTAAA------ACT---GGAAACAAGCCATTA---GCA---ACT---GCA---TGG---GGT---GCTATG---AGAATGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFMERNTVAA-GWKTSVTVAGLVTGVAFIHYMYMRDVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-KKIPG-AI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------MLG-FIVGMAGWIYILYEV-----F--S-GEAGKIAAK--T-GNKPL-A-T-A-W-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU915769 [IV-Alpha8-SAR11/IMCC9063] PF75133_env_samples_EU915769 gi|229358420|gb|EU915769| Uncultured microorganism clone PF75133 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF75133 putative proteorhodopsin gene, partial cds EU915769 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTATTAGCGGCTACTGTATTCTTCTTCATGGAAAGAAATACTGTTGCAGCAGGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTAATGACTGGAGATTCTCCAACAGTATATAGATATATTGATTGGTTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAATTCTAGCAGCAGTTAAGAAAATCCCAGGAGCAATCTTCTGGAGATTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAAGCAGGTTACATCAATGCTATGCTTGGTTTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCTGGTGAAGCTGGAAAAATTGCAGCTAAAACTGGAAACAAGCCATTAGCAACTGCATGGGGTGCTATGAGAATGATCGTAACAATCGGGTGGGCTATTTAT LLAATVFFFMERNTVAAGWKTSVTVAGLVTGVAFIHYMYMRDVWVMTGDSPTVYRYIDWLITVPLQMIEFYLILAAVKKIPGAIFWRLLIGSLVMLIGGYLGEAGYINAMLGFIVGMAGWIYILYEVFSGEAGKIAAKTGNKPLATAWGAMRMIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTCATGGAAAGAAATACTGTTGCAGCA---GGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTA------------------------------ATGACT---------------------GGAGATTCTCCAACAGTATATAGATATATTGATTGG------------------------TTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAATTCTAGCAGCA---------GTT---AAGAAAATCCCAGGA---GCAATC------------------------------------TTCTGGAGA---TTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ATGCTTGGT---TTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCTGGAAAAATTGCAGCTAAA------ACT---GGAAACAAGCCATTA---GCA---ACT---GCA---TGG---GGT---GCTATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGGTGG---------GCTATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFMERNTVAA-GWKTSVTVAGLVTGVAFIHYMYMRDVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-KKIPG-AI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------MLG-FIVGMAGWIYILYEV-----F--S-GEAGKIAAK--T-GNKPL-A-T-A-W-G-AM-RMIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU915726 [IV-Alpha8-SAR11/IMCC9063] APF9052_env_samples_EU915726 gi|229358334|gb|EU915726| Uncultured microorganism clone APF9052 putative proteorhodopsin gene, partial cds Uncultured microorganism clone APF9052 putative proteorhodopsin gene, partial cds EU915726 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample_at_75_m_depth Atlantic Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na GTATTAGCGGCTACTGTATTCTTCTTCATGGAAAGAAATACTGTTGCAGCAGGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTAATGACTGGAGATTCTCCAACAGTATATAGATATATTGATTGGTTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAATTCTAGCAGCAGTTAAGAAAATCCCAGGAGCAATCTTCTGGAGATTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAAGCAGGTTACATCAATGCTATGCTTGGTTTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCTGGTGAAGCTGGAAAAATTGCAGCTAAAACTGGAAATAAGCCATTAGCAACTGCATGGGGTGCTATGAGAATGATCGTAACAATCGGGTGGGCCATCTAC VLAATVFFFMERNTVAAGWKTSVTVAGLVTGVAFIHYMYMRDVWVMTGDSPTVYRYIDWLITVPLQMIEFYLILAAVKKIPGAIFWRLLIGSLVMLIGGYLGEAGYINAMLGFIVGMAGWIYILYEVFSGEAGKIAAKTGNKPLATAWGAMRMIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGGCTACTGTATTCTTCTTCATGGAAAGAAATACTGTTGCAGCA---GGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTA------------------------------ATGACT---------------------GGAGATTCTCCAACAGTATATAGATATATTGATTGG------------------------TTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAATTCTAGCAGCA---------GTT---AAGAAAATCCCAGGA---GCAATC------------------------------------TTCTGGAGA---TTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ATGCTTGGT---TTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCTGGAAAAATTGCAGCTAAA------ACT---GGAAATAAGCCATTA---GCA---ACT---GCA---TGG---GGT---GCTATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGGTGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------VLAATVFFFMERNTVAA-GWKTSVTVAGLVTGVAFIHYMYMRDVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-KKIPG-AI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------MLG-FIVGMAGWIYILYEV-----F--S-GEAGKIAAK--T-GNKPL-A-T-A-W-G-AM-RMIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EF088519 [IV-Alpha8-SAR11/IMCC9063] clone_APF9052_EF088519 gi|126843255|gb|EF088519| Uncultured bacterium clone APF9052 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone APF9052 putative proteorhodopsin gene, partial cds. EF088519 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na 75m water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na GTATTAGCGGCTACTGTATTCTTCTTCATGGAAAGAAATACTGTTGCAGCAGGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTAATGACTGGAGATTCTCCAACAGTATATAGATATATTGATTGGTTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAATTCTAGCAGCAGTTAAGAAAATCCCAGGAGCAATCTTCTGGAGATTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAAGCAGGTTACATCAATGCTATGCTTGGTTTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCTGGTGAAGCTGGAAAAATTGCAGCTAAAACTGGAAATAAGCCATTAGCAACTGCATGGGGTGCTATGAGAATGATCGTAACAATCGGGTGGGCCATCTACCCA VLAATVFFFMERNTVAAGWKTSVTVAGLVTGVAFIHYMYMRDVWVMTGDSPTVYRYIDWLITVPLQMIEFYLILAAVKKIPGAIFWRLLIGSLVMLIGGYLGEAGYINAMLGFIVGMAGWIYILYEVFSGEAGKIAAKTGNKPLATAWGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGGCTACTGTATTCTTCTTCATGGAAAGAAATACTGTTGCAGCA---GGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTA------------------------------ATGACT---------------------GGAGATTCTCCAACAGTATATAGATATATTGATTGG------------------------TTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAATTCTAGCAGCA---------GTT---AAGAAAATCCCAGGA---GCAATC------------------------------------TTCTGGAGA---TTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ATGCTTGGT---TTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCTGGAAAAATTGCAGCTAAA------ACT---GGAAATAAGCCATTA---GCA---ACT---GCA---TGG---GGT---GCTATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGGTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------VLAATVFFFMERNTVAA-GWKTSVTVAGLVTGVAFIHYMYMRDVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-KKIPG-AI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------MLG-FIVGMAGWIYILYEV-----F--S-GEAGKIAAK--T-GNKPL-A-T-A-W-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ927034 [IV-Alpha8-SAR11/IMCC9063] clone_AT06033_DQ927034 gi|116294183|gb|DQ927034| Uncultured bacterium clone AT06033 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT06033 putative proteorhodopsin gene, partial cds. DQ927034 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na GTATTAGCGGCTACTGTATTCTTCTTCATGGAAAGAAATACTGTTGCAGCAGGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTAATGACTGGAGATTCTCCAACAGTATATAGATATATTGATTGGTTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAATTCTAGCAGCAGTTAAGAAAATCCCAGGAGCAATCTTCTGGAGATTGTTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAAGCAGGTTACATCAATGCTATGCTTGGTTTCATAGTCGGTATGGCTGGATGGATCTACATCTTGTATGAAATATTCTCTGGTGAAGCTGGAAAAATTGCAGCTAAAACTGGAAACAAGCCATTAGCAACTGCATGGGGTGCTATGAGAATGATCGTAACAATCGGCTGGGCCATCTACCCA VLAATVFFFMERNTVAAGWKTSVTVAGLVTGVAFIHYMYMRDVWVMTGDSPTVYRYIDWLITVPLQMIEFYLILAAVKKIPGAIFWRLLIGSLVMLIGGYLGEAGYINAMLGFIVGMAGWIYILYEIFSGEAGKIAAKTGNKPLATAWGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGGCTACTGTATTCTTCTTCATGGAAAGAAATACTGTTGCAGCA---GGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTA------------------------------ATGACT---------------------GGAGATTCTCCAACAGTATATAGATATATTGATTGG------------------------TTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAATTCTAGCAGCA---------GTT---AAGAAAATCCCAGGA---GCAATC------------------------------------TTCTGGAGA---TTGTTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ATGCTTGGT---TTCATAGTCGGTATGGCTGGATGGATCTACATCTTGTATGAAATA---------------TTC------TCT---GGTGAAGCTGGAAAAATTGCAGCTAAA------ACT---GGAAACAAGCCATTA---GCA---ACT---GCA---TGG---GGT---GCTATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGCTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------VLAATVFFFMERNTVAA-GWKTSVTVAGLVTGVAFIHYMYMRDVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-KKIPG-AI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------MLG-FIVGMAGWIYILYEI-----F--S-GEAGKIAAK--T-GNKPL-A-T-A-W-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU915729 [IV-Alpha8-SAR11/IMCC9063] APF9060_env_samples_EU915729 gi|229358340|gb|EU915729| Uncultured microorganism clone APF9060 putative proteorhodopsin gene, partial cds Uncultured microorganism clone APF9060 putative proteorhodopsin gene, partial cds EU915729 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample_at_75_m_depth Atlantic Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTATTAGCGGCTACTGTATTCTTCTTCATGGAAAGAAATACTGTTGCAGCAGGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTAATGACTGGAGATTCTCCAACAGTATATAGATATATTGATTGGTTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAATTCTAGCAGCAGTTAAGAAAATCCCAGGAGCAATCTTCTGGAGATTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAAGCAGGTTACATCAATGCTATGCTTGGTTTCATAGTCGGTATGGCTGGATGGATTTACATCTTATATGAAGTATTCTCAGGTGAAGCTGGAAAAATTGCAGCTAAAACTGGAAACAAGCCATTAGCAACTGCATGGGGTGCTATGAGAATGATCGTAACAATCGGTTGGGCGATCTAC LLAATVFFFMERNTVAAGWKTSVTVAGLVTGVAFIHYMYMRDVWVMTGDSPTVYRYIDWLITVPLQMIEFYLILAAVKKIPGAIFWRLLIGSLVMLIGGYLGEAGYINAMLGFIVGMAGWIYILYEVFSGEAGKIAAKTGNKPLATAWGAMRMIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTCATGGAAAGAAATACTGTTGCAGCA---GGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTA------------------------------ATGACT---------------------GGAGATTCTCCAACAGTATATAGATATATTGATTGG------------------------TTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAATTCTAGCAGCA---------GTT---AAGAAAATCCCAGGA---GCAATC------------------------------------TTCTGGAGA---TTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ATGCTTGGT---TTCATAGTCGGTATGGCTGGATGGATTTACATCTTATATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAATTGCAGCTAAA------ACT---GGAAACAAGCCATTA---GCA---ACT---GCA---TGG---GGT---GCTATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGTTGG---------GCGATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFMERNTVAA-GWKTSVTVAGLVTGVAFIHYMYMRDVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-KKIPG-AI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------MLG-FIVGMAGWIYILYEV-----F--S-GEAGKIAAK--T-GNKPL-A-T-A-W-G-AM-RMIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EF088522 [IV-Alpha8-SAR11/IMCC9063] clone_APF9060_EF088522 gi|126843261|gb|EF088522| Uncultured bacterium clone APF9060 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone APF9060 putative proteorhodopsin gene, partial cds. EF088522 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na 75m water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na CTATTAGCGGCTACTGTATTCTTCTTCATGGAAAGAAATACTGTTGCAGCAGGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTAATGACTGGAGATTCTCCAACAGTATATAGATATATTGATTGGTTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAATTCTAGCAGCAGTTAAGAAAATCCCAGGAGCAATCTTCTGGAGATTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAAGCAGGTTACATCAATGCTATGCTTGGTTTCATAGTCGGTATGGCTGGATGGATTTACATCTTATATGAAGTATTCTCAGGTGAAGCTGGAAAAATTGCAGCTAAAACTGGAAACAAGCCATTAGCAACTGCATGGGGTGCTATGAGAATGATCGTAACAATCGGTTGGGCGATCTACCCA LLAATVFFFMERNTVAAGWKTSVTVAGLVTGVAFIHYMYMRDVWVMTGDSPTVYRYIDWLITVPLQMIEFYLILAAVKKIPGAIFWRLLIGSLVMLIGGYLGEAGYINAMLGFIVGMAGWIYILYEVFSGEAGKIAAKTGNKPLATAWGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTCATGGAAAGAAATACTGTTGCAGCA---GGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTA------------------------------ATGACT---------------------GGAGATTCTCCAACAGTATATAGATATATTGATTGG------------------------TTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAATTCTAGCAGCA---------GTT---AAGAAAATCCCAGGA---GCAATC------------------------------------TTCTGGAGA---TTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ATGCTTGGT---TTCATAGTCGGTATGGCTGGATGGATTTACATCTTATATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAATTGCAGCTAAA------ACT---GGAAACAAGCCATTA---GCA---ACT---GCA---TGG---GGT---GCTATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGTTGG---------GCGATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFMERNTVAA-GWKTSVTVAGLVTGVAFIHYMYMRDVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-KKIPG-AI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------MLG-FIVGMAGWIYILYEV-----F--S-GEAGKIAAK--T-GNKPL-A-T-A-W-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ927017 [IV-Alpha8-SAR11/IMCC9063] clone_AT06008_DQ927017 gi|116294149|gb|DQ927017| Uncultured bacterium clone AT06008 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT06008 putative proteorhodopsin gene, partial cds. DQ927017 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGGTTGCCGCTACAGTATTCTTCTTCATGGAAAGAAATACTGTTGCAGCAGGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTAATGACTGGAGATTCTCCAACAGTATATAGATATATTGATTGGTTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAATTCTAGCAGCAGTTAAGAAAATCCCAGGAGCAATCTTCTGGAGATTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAAGCAGGTTACATCAATGCTATGCTTGGTTTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCTGGTGAAGCTGGAAAAATTGCAGCTAAAACTGGAAACAAGCCATTAGCAACTGCATGGGGCGCTACGAGAATGATCGTAACAATTGGTTGGGCCATCTACCCA MVAATVFFFMERNTVAAGWKTSVTVAGLVTGVAFIHYMYMRDVWVMTGDSPTVYRYIDWLITVPLQMIEFYLILAAVKKIPGAIFWRLLIGSLVMLIGGYLGEAGYINAMLGFIVGMAGWIYILYEVFSGEAGKIAAKTGNKPLATAWGATRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACAGTATTCTTCTTCATGGAAAGAAATACTGTTGCAGCA---GGCTGGAAAACTTCAGTAACAGTAGCTGGTCTTGTAACTGGTGTTGCATTCATTCACTACATGTACATGAGAGATGTATGGGTA------------------------------ATGACT---------------------GGAGATTCTCCAACAGTATATAGATATATTGATTGG------------------------TTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAATTCTAGCAGCA---------GTT---AAGAAAATCCCAGGA---GCAATC------------------------------------TTCTGGAGA---TTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ATGCTTGGT---TTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCTGGAAAAATTGCAGCTAAA------ACT---GGAAACAAGCCATTA---GCA---ACT---GCA---TGG---GGC---GCTACG---AGAATGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERNTVAA-GWKTSVTVAGLVTGVAFIHYMYMRDVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-KKIPG-AI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------MLG-FIVGMAGWIYILYEV-----F--S-GEAGKIAAK--T-GNKPL-A-T-A-W-G-AT-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ903135 [IV-Alpha8-SAR11/IMCC9063] clone_A1S0101_DQ903135 gi|116293999|gb|DQ903135| Uncultured bacterium clone A1S0101 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A1S0101 putative proteorhodopsin gene, partial cds. DQ903135 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na South China Sea surface water (SCS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na ATGCTGGCCGCTACTGTTTTCTTCTTCATGGAAAGAGGAACAGTGCATCCTGGCTGGAAAACGTCAGTAACTGTAGCTGGACTAGTAACTGGTGTAGCATTCGTGCATTACATGTACATGAGAGAAGTATGGGTAATGACTGGAGACTCACCAACTGTGTACAGATATATTGACTGGTTAATTACTGTACCGTTACAGATGATAGAATTTTACTTAATTCTAGCAGCAGTAAGAAAAATCCCAGGAGCTATCTTCTGGAGATTGCTAATTGGTTCACTAGTTATGTTAATTGGTGGATACATGGGAGAAGCAGGTTACATCAATGCAATGCTTGGTTTCATTATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCAGGTGAGGCTGGTAAATTAGCAGCTAAGTCTGGTAATAAGCCATTAGCTACTGCATGGGGCGCTATGAGAATGATCGTAACAGTAGGCTGGGCAATCTACCCA MLAATVFFFMERGTVHPGWKTSVTVAGLVTGVAFVHYMYMREVWVMTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKIPGAIFWRLLIGSLVMLIGGYMGEAGYINAMLGFIIGMAGWIYILYEVFSGEAGKLAAKSGNKPLATAWGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGTTTTCTTCTTCATGGAAAGAGGAACAGTGCATCCT---GGCTGGAAAACGTCAGTAACTGTAGCTGGACTAGTAACTGGTGTAGCATTCGTGCATTACATGTACATGAGAGAAGTATGGGTA------------------------------ATGACT---------------------GGAGACTCACCAACTGTGTACAGATATATTGACTGG------------------------TTAATTACTGTACCGTTACAGATGATAGAATTTTACTTAATTCTAGCAGCA---------GTA---AGAAAAATCCCAGGA---GCTATC------------------------------------TTCTGGAGA---TTGCTAATTGGTTCACTAGTTATGTTAATTGGTGGATACATGGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCA------------------ATGCTTGGT---TTCATTATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCA---GGTGAGGCTGGTAAATTAGCAGCTAAG------TCT---GGTAATAAGCCATTA---GCT---ACT---GCA---TGG---GGC---GCTATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGCTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFMERGTVHP-GWKTSVTVAGLVTGVAFVHYMYMREVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKIPG-AI------------FWR-LLIGSLVMLIGGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWIYILYEV-----F--S-GEAGKLAAK--S-GNKPL-A-T-A-W-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ927000 [IV-Alpha8-SAR11/IMCC9063] clone_PF91127_DQ927000 gi|116294115|gb|DQ927000| Uncultured bacterium clone PF91127 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF91127 putative proteorhodopsin gene, partial cds. DQ927000 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGGTGGCCGCTACTGTATTCTTCTTCATGGAAAGAGGAACAGTGCATCCTGGCTGGAAAACGTCAGTAACTGTAGCTGGACTAGTAACTGGTGTAGCATTCGTGCATTACATGTACATGAGAGAAGTATGGGTAATGACTGGAGACTCACCAACTGTGTACAGACATATTGACTGGTTAATTACTGTACCATTACAGATGATAGAATTTTACTTAATTCTAGCAGCAGTAAGAAAAATCCCAGGAGCTATCTTCTGGAGATTGCTAATTGGTTCACTAGTTATGTTAATTGGTGGATACATGGGAGTAGCAGGTTACATCAATGCTATGCTTGGTTTCATTATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCAGGTGAGGCTGGTAAATTAGCAGCTAAATCTGGTAATAAGCCATTAGCTACTGCATGGGGCGCTATGAGAATGATCGTAACAGTAGGCTGGGCAATCTATCCA MVAATVFFFMERGTVHPGWKTSVTVAGLVTGVAFVHYMYMREVWVMTGDSPTVYRHIDWLITVPLQMIEFYLILAAVRKIPGAIFWRLLIGSLVMLIGGYMGVAGYINAMLGFIIGMAGWIYILYEVFSGEAGKLAAKSGNKPLATAWGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTATTCTTCTTCATGGAAAGAGGAACAGTGCATCCT---GGCTGGAAAACGTCAGTAACTGTAGCTGGACTAGTAACTGGTGTAGCATTCGTGCATTACATGTACATGAGAGAAGTATGGGTA------------------------------ATGACT---------------------GGAGACTCACCAACTGTGTACAGACATATTGACTGG------------------------TTAATTACTGTACCATTACAGATGATAGAATTTTACTTAATTCTAGCAGCA---------GTA---AGAAAAATCCCAGGA---GCTATC------------------------------------TTCTGGAGA---TTGCTAATTGGTTCACTAGTTATGTTAATTGGTGGATACATGGGAGTA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ATGCTTGGT---TTCATTATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCA---GGTGAGGCTGGTAAATTAGCAGCTAAA------TCT---GGTAATAAGCCATTA---GCT---ACT---GCA---TGG---GGC---GCTATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGCTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERGTVHP-GWKTSVTVAGLVTGVAFVHYMYMREVWV----------MT-------GDSPTVYRHIDW--------LITVPLQMIEFYLILAA---V-RKIPG-AI------------FWR-LLIGSLVMLIGGYMGV---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWIYILYEV-----F--S-GEAGKLAAK--S-GNKPL-A-T-A-W-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ926999 [IV-Alpha8-SAR11/IMCC9063] clone_PF91121_DQ926999 gi|116294113|gb|DQ926999| Uncultured bacterium clone PF91121 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF91121 putative proteorhodopsin gene, partial cds. DQ926999 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGGTGGCCGCTACTGCCTTCTTCTTTATGGAAAGAGGAACAGTGCATCCTGGCTGGAAAACGTCAGTAACTGTAGCTGGACTAGCAACTGGTGTAGCATTCGTACATTACATGTACATGAGAGAAGTATGGGTAATGACTGGAGACTCACCAACTGTGTACAGATATATTGACTGGTTAATTACTGTACCATTACAGATGATAGAATTTTACTTAATTCTAGCAGCAGTAAGAAAAATCCCAGGAGCTATCTTCTGGAGATTGCTAATTGGTTCACTGGTTATGTTAATTGGTGGATACATGGGAGAAGCAGGTTACATCAATGCTATGCTTGGTTTCATTATCGGTATGGCTGGATGGATCTACATCTTGTATGAAGTATTCTCAGGTGAGGCTGGTAAATTAGCGGCTAAATCTGGTAATAAGCCATTAGCTACTGCATGGGGCGCTATGAGAATGATCGTAACAGTAGGATGGGCCATATATCCA MVAATAFFFMERGTVHPGWKTSVTVAGLATGVAFVHYMYMREVWVMTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKIPGAIFWRLLIGSLVMLIGGYMGEAGYINAMLGFIIGMAGWIYILYEVFSGEAGKLAAKSGNKPLATAWGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCCTTCTTCTTTATGGAAAGAGGAACAGTGCATCCT---GGCTGGAAAACGTCAGTAACTGTAGCTGGACTAGCAACTGGTGTAGCATTCGTACATTACATGTACATGAGAGAAGTATGGGTA------------------------------ATGACT---------------------GGAGACTCACCAACTGTGTACAGATATATTGACTGG------------------------TTAATTACTGTACCATTACAGATGATAGAATTTTACTTAATTCTAGCAGCA---------GTA---AGAAAAATCCCAGGA---GCTATC------------------------------------TTCTGGAGA---TTGCTAATTGGTTCACTGGTTATGTTAATTGGTGGATACATGGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ATGCTTGGT---TTCATTATCGGTATGGCTGGATGGATCTACATCTTGTATGAAGTA---------------TTC------TCA---GGTGAGGCTGGTAAATTAGCGGCTAAA------TCT---GGTAATAAGCCATTA---GCT---ACT---GCA---TGG---GGC---GCTATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGATGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMERGTVHP-GWKTSVTVAGLATGVAFVHYMYMREVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKIPG-AI------------FWR-LLIGSLVMLIGGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWIYILYEV-----F--S-GEAGKLAAK--S-GNKPL-A-T-A-W-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EF088630 [IV-Alpha8-SAR11/IMCC9063] PF13006_env_samples_EF088630 gi|126843510|gb|EF088630| Uncultured bacterium clone PF13006 putative proteorhodopsin gene, partial cds Uncultured bacterium clone PF13006 putative proteorhodopsin gene, partial cds EF088630 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na surface_water_sample Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na CTATTAGCGGCTACTGTATTCTTCTTCATGGAAAGAGGAACAGTGCATCCTGGCTGGAAAACGTCAGTAACTGTAGCTGGACTAGTAACTGGTGTAGCATTCGTGCATTACATGTACATGAGAGAAGTATGGGTAATGACTGGAGACTCACCGACTGTGTACAGATATATTGACTGGTTAATTACTGTACCATTACAGATGATAGAATTTTACTTAATTCTAGCAGCAGTAAGAAAAATTCCAGGAGCTATCTTCTGGAGATTGTTAATTGGTTCACTAGTTATGTTAATTGGTGGATACATGGGAGAAGCAGGTTACATCAATGCTATGCTTGGTTTCATTATCGGTATGGCTGGATGGATCTACATCTTGTATGAAGTATTCTCAGGTGAGGCTGGTAAATTAGCAGCTAAATCTGGTAATAAGCCATTAGCTACTGCATGGGGCGCTATGAGAATGATCGTAACAGTAGGTTGGGCCATATATCCA LLAATVFFFMERGTVHPGWKTSVTVAGLVTGVAFVHYMYMREVWVMTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKIPGAIFWRLLIGSLVMLIGGYMGEAGYINAMLGFIIGMAGWIYILYEVFSGEAGKLAAKSGNKPLATAWGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTCATGGAAAGAGGAACAGTGCATCCT---GGCTGGAAAACGTCAGTAACTGTAGCTGGACTAGTAACTGGTGTAGCATTCGTGCATTACATGTACATGAGAGAAGTATGGGTA------------------------------ATGACT---------------------GGAGACTCACCGACTGTGTACAGATATATTGACTGG------------------------TTAATTACTGTACCATTACAGATGATAGAATTTTACTTAATTCTAGCAGCA---------GTA---AGAAAAATTCCAGGA---GCTATC------------------------------------TTCTGGAGA---TTGTTAATTGGTTCACTAGTTATGTTAATTGGTGGATACATGGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ATGCTTGGT---TTCATTATCGGTATGGCTGGATGGATCTACATCTTGTATGAAGTA---------------TTC------TCA---GGTGAGGCTGGTAAATTAGCAGCTAAA------TCT---GGTAATAAGCCATTA---GCT---ACT---GCA---TGG---GGC---GCTATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFMERGTVHP-GWKTSVTVAGLVTGVAFVHYMYMREVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKIPG-AI------------FWR-LLIGSLVMLIGGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWIYILYEV-----F--S-GEAGKLAAK--S-GNKPL-A-T-A-W-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_GU206107 [IV-Alpha8-SAR11/IMCC9063] clone_GH-B-6B1_GU206107 gi|280977904|gb|GU206107| Uncultured bacterium clone GH-B-6B1 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone GH-B-6B1 putative proteorhodopsin gene, partial cds. GU206107 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 27-AUG-2010 2008 Antarctic Ocean, Ross Sea, Granite Harbour bottom sea ice Antarctic Ocean marine -77.02 162.87 Proteorhodopsin-bearing bacteria in Antarctic sea ice Koh,E.Y., Atamna-Ismaeel,N., Martin,A., Cowie,R.O., Beja,O., Davy,S.K., Maas,E.W. and Ryan,K.G. Appl. Environ. Microbiol. 76 (17), 5918-5925 (2010) 20601510 #na GCGCAATTCTTGCGGTATATTGATTGGTTAATTACTGTACCATTACAGATGATAGAATTTTACTTAATTCTAGCAGCAGTAAGAAAAATTCCAGGAGCTATTTTCTGGAGATTGCTAATTGGTTCACTAGTTATGTTAATTGGTGGATACATGGGAGACGCAGGTTACATCAATGCAATGCTTGGTTTCATTATCGGTATGGCTGGATGGATCTACATCTTGTATGAAGTATTTTCAGGTGAAGCAGGTAAACTTGCTGCGAAATCTGGTAATAAGCCATTAGCTACTGCTTGGGGCGCTATGAGAATGATCGTAACAGTAGGGTGGGCCATCTACCCAAGCTTGCGCGCA AQFLRYIDWLITVPLQMIEFYLILAAVRKIPGAIFWRLLIGSLVMLIGGYMGDAGYINAMLGFIIGMAGWIYILYEVFSGEAGKLAAKSGNKPLATAWGAMRMIVTVGWAIYPSLRA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCAATTCTTGCGGTATATTGATTGG------------------------TTAATTACTGTACCATTACAGATGATAGAATTTTACTTAATTCTAGCAGCA---------GTA---AGAAAAATTCCAGGA---GCTATT------------------------------------TTCTGGAGA---TTGCTAATTGGTTCACTAGTTATGTTAATTGGTGGATACATGGGAGAC---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCA------------------ATGCTTGGT---TTCATTATCGGTATGGCTGGATGGATCTACATCTTGTATGAAGTA---------------TTT------TCA---GGTGAAGCAGGTAAACTTGCTGCGAAA------TCT---GGTAATAAGCCATTA---GCT---ACT---GCT---TGG---GGC---GCTATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGGTGG---------GCCATCTACCCAAGCTTGCGCGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AQFLRYIDW--------LITVPLQMIEFYLILAA---V-RKIPG-AI------------FWR-LLIGSLVMLIGGYMGD---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWIYILYEV-----F--S-GEAGKLAAK--S-GNKPL-A-T-A-W-G-AM-RMIVTV---------------------GW---AIYPSLRA---------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EF079848 [IV-Alpha8-SAR11/IMCC9063] clone_ID11O20_EF079848 gi|126361785|gb|EF079848| Uncultured bacterium clone ID11O20 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID11O20 putative proteorhodopsin gene, partial cds. EF079848 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na #na Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGCTCGCCGCTACTGTATTCTTCTTTATGGAAAGAGGAACAGTGCATCCTGGCTGGAAAACATCAGTAACTGTAGCTGGACTTGTAACTGGTGTGGCATTTGTTCATTACATGTACATGAGAGATGTATGGGTAATTACAGGAGAATCACCAACTGTATACAGATACATTGATTGGTTAATCACTGTACCTTTACAGATGATAGAATTTTACTTAATTCTAGCAGCAGTAAGAAAAATCCCAGGAGCTATCTTCTGGAGACTGTTAATTGGTTCACTAGTTATGTTAATTGGTGGATATCTAGGAGAAGCAGGTTACATCCCTGCCATGATTGGTTTCATAATCGGTATGGCTGGATGGATCTACATCTTGTATGAAGTATTTTCAGGTGAAGCTGGTAAACTTGCAGCAAAATCTGGTAATAAGCCATTAGCTACTGCATGGGGTGCTATGAGAATGATCGTTACAGTAGGTTGGGCTATCTATCCA MLAATVFFFMERGTVHPGWKTSVTVAGLVTGVAFVHYMYMRDVWVITGESPTVYRYIDWLITVPLQMIEFYLILAAVRKIPGAIFWRLLIGSLVMLIGGYLGEAGYIPAMIGFIIGMAGWIYILYEVFSGEAGKLAAKSGNKPLATAWGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTCGCCGCTACTGTATTCTTCTTTATGGAAAGAGGAACAGTGCATCCT---GGCTGGAAAACATCAGTAACTGTAGCTGGACTTGTAACTGGTGTGGCATTTGTTCATTACATGTACATGAGAGATGTATGGGTA------------------------------ATTACA---------------------GGAGAATCACCAACTGTATACAGATACATTGATTGG------------------------TTAATCACTGTACCTTTACAGATGATAGAATTTTACTTAATTCTAGCAGCA---------GTA---AGAAAAATCCCAGGA---GCTATC------------------------------------TTCTGGAGA---CTGTTAATTGGTTCACTAGTTATGTTAATTGGTGGATATCTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------CCTGCC------------------ATGATTGGT---TTCATAATCGGTATGGCTGGATGGATCTACATCTTGTATGAAGTA---------------TTT------TCA---GGTGAAGCTGGTAAACTTGCAGCAAAA------TCT---GGTAATAAGCCATTA---GCT---ACT---GCA---TGG---GGT---GCTATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFMERGTVHP-GWKTSVTVAGLVTGVAFVHYMYMRDVWV----------IT-------GESPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKIPG-AI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------PA------MIG-FIIGMAGWIYILYEV-----F--S-GEAGKLAAK--S-GNKPL-A-T-A-W-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422488 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-50m-d4_DQ422488 gi|90024496|gb|DQ422488| Uncultured bacterium clone med-tb04-50m-d4 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-d4 putative proteorhodopsin gene, partial cds. DQ422488 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACAGTTCCACTACAGATGATAGAATTCTACTTAATTCTAGCAGCTGTAAGAAAAGTATCAGGTTCAATCTTCTGGAGACTATTAATTGGTTCTCTAGTTATGTTGATCGGTGGATATCTAGGAGAAGCAGGTTACATCAACGCTATGCTTGGTTTCGTAATAGGTATGGCTGGATGGATCTACATCTTATATGAAATATTCTCTGGCGAAGCTGGTAAAATGGCAGCTAAAAGTGGAAACAAAGCATTAGCGACTGCTTTTGGTGCTATGAGAATGATCGTAACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQMIEFYLILAAVRKVSGSIFWRLLIGSLVMLIGGYLGEAGYINAMLGFVIGMAGWIYILYEIFSGEAGKMAAKSGNKALATAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTTCCACTACAGATGATAGAATTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGTATCAGGT---TCAATC------------------------------------TTCTGGAGA---CTATTAATTGGTTCTCTAGTTATGTTGATCGGTGGATATCTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ATGCTTGGT---TTCGTAATAGGTATGGCTGGATGGATCTACATCTTATATGAAATA---------------TTC------TCT---GGCGAAGCTGGTAAAATGGCAGCTAAA------AGT---GGAAACAAAGCATTA---GCG---ACT---GCT---TTT---GGT---GCTATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---V-RKVSG-SI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------MLG-FVIGMAGWIYILYEI-----F--S-GEAGKMAAK--S-GNKAL-A-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422291 [IV-Alpha8-SAR11/IMCC9063] clone_med-20m-d3_DQ422291 gi|90024102|gb|DQ422291| Uncultured bacterium clone med-20m-d3 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-d3 putative proteorhodopsin gene, partial cds. DQ422291 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATCACAGTGCCACTTCAAATGATCGAATTCTATCTAATCTTGGCAGCTGTAAGAAAGGTGCCAACTTCTATATTCTGGAAGCTATTAATTGGTTCTTTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGTTATATTCAACCATTTGTAGGTTTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATATTCTCAGGTGAAGCTGGAACTATGGCGGCAAAAGCTGGTAACAAAGCTATGTCTACTGCTTTCAGTGCAATGAGAATAATCGTAACTATTGGTTGGGCTATTTATCCA RYIDWLITVPLQMIEFYLILAAVRKVPTSIFWKLLIGSLVMLIGGYLGEAGYIQPFVGFVIGMAGWIYILFEIFSGEAGTMAAKAGNKAMSTAFSAMRIIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATCACAGTGCCACTTCAAATGATCGAATTCTATCTAATCTTGGCAGCT---------GTA---AGAAAGGTGCCAACT---TCTATA------------------------------------TTCTGGAAG---CTATTAATTGGTTCTTTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------CAACCA------------------TTTGTAGGT---TTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATA---------------TTC------TCA---GGTGAAGCTGGAACTATGGCGGCAAAA------GCT---GGTAACAAAGCTATG---TCT---ACT---GCT---TTC---AGT---GCAATG---AGAATAATCGTAACTATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---V-RKVPT-SI------------FWK-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------QP------FVG-FVIGMAGWIYILFEI-----F--S-GEAGTMAAK--A-GNKAM-S-T-A-F-S-AM-RIIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ203423 [IV-Alpha8-SAR11/IMCC9063] MedHO102H2_env_samples_DQ203423 gi|77547294|gb|DQ203423| Uncultured bacterium clone MedHO102H2 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102H2 predicted proteorhodopsin gene, partial cds DQ203423 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGTTAATTACTGTGCCACTTCAAATGATCGAATTCTATCTAATTTTGGCAGCTGTAAGAAAGGTGCCAACGTCTATATTCTGGAAGCTATTAATTGGTTCGTTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGTTACATTCAACCATTTGTAGGTTTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATATTCTCAGGTGAAGCTGGAACTTTAGCTGCAAAAGCAGGTAATAGAGCTATGACTACTGCTTTCGGTGCAATGAGAATAATTGTAACTATTGGTTGGGCCATTTACCCA RYIDWLITVPLQMIEFYLILAAVRKVPTSIFWKLLIGSLVMLIGGYLGEAGYIQPFVGFVIGMAGWIYILFEIFSGEAGTLAAKAGNRAMTTAFGAMRIIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------TTAATTACTGTGCCACTTCAAATGATCGAATTCTATCTAATTTTGGCAGCT---------GTA---AGAAAGGTGCCAACG---TCTATA------------------------------------TTCTGGAAG---CTATTAATTGGTTCGTTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGT------TAC---------------------------------ATT------------------------------------------------------------------CAACCA------------------TTTGTAGGT---TTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATA---------------TTC------TCA---GGTGAAGCTGGAACTTTAGCTGCAAAA------GCA---GGTAATAGAGCTATG---ACT---ACT---GCT---TTC---GGT---GCAATG---AGAATAATTGTAACTATT---------------------------------------------------------------GGTTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---V-RKVPT-SI------------FWK-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------QP------FVG-FVIGMAGWIYILFEI-----F--S-GEAGTLAAK--A-GNRAM-T-T-A-F-G-AM-RIIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422492 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-50m-d8_DQ422492 gi|90024504|gb|DQ422492| Uncultured bacterium clone med-tb04-50m-d8 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-d8 putative proteorhodopsin gene, partial cds. DQ422492 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTGCCACTTCAAATGATCGAATTCTATCTAATTTTGGCAGCTGTAAGAAAGGTGCCAACGTCTATATTCTGGAAGCTATTAATTGGTTCGTTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGTTACATTCAACCATTTGTAGGTTTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATATTCTCAGGTGAGGCTGGAACTTTAGCAGCAAAAGCAGGTAACAGAGCTATGACTACCGCTTTTAGTGCAATGAGAATAATTGTAACTATTGGTTGGGCTATCTATCCA RYIDWLITVPLQMIEFYLILAAVRKVPTSIFWKLLIGSLVMLIGGYLGEAGYIQPFVGFVIGMAGWIYILFEIFSGEAGTLAAKAGNRAMTTAFSAMRIIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTGCCACTTCAAATGATCGAATTCTATCTAATTTTGGCAGCT---------GTA---AGAAAGGTGCCAACG---TCTATA------------------------------------TTCTGGAAG---CTATTAATTGGTTCGTTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGT------TAC---------------------------------ATT------------------------------------------------------------------CAACCA------------------TTTGTAGGT---TTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATA---------------TTC------TCA---GGTGAGGCTGGAACTTTAGCAGCAAAA------GCA---GGTAACAGAGCTATG---ACT---ACC---GCT---TTT---AGT---GCAATG---AGAATAATTGTAACTATT---------------------------------------------------------------GGTTGG---------GCTATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---V-RKVPT-SI------------FWK-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------QP------FVG-FVIGMAGWIYILFEI-----F--S-GEAGTLAAK--A-GNRAM-T-T-A-F-S-AM-RIIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926094 [IV-Alpha8-SAR11/IMCC9063] BOUM_OTU007_env_samples gb|KJ926094| Uncultured bacterium clone BOUM OTU007 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU007 putative proteorhodopsin gene, partial cds KJ926094 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 33.709667 32.644667 #na #na #na #na #na ATTGATTGGTTAATTACTGTGCCACTTCAAATGGTAGAATTCTATCTAATCTTGGCAGCTGTAAGAAAGGTGCCAACTTCTATATTCTGGAAACTATTAATTGGTTCTTTAGTGATGTTAATCGGTGGATACTTAGGTGAAGCTGGTTACATACAACCATTCGTAGGTTTCGTAATTGGAATGGCTGGATGGATCTACATCTTGTTTGAAATATTCTCAGGTGAAGCTGGAACTGCAGCTGCAAAGTCTGGTAACAAGGCTATGTCAACTGCGTTTAGCGCAATGAGAATTATCGTAACAATAGGATGGGCCATATAT IDWLITVPLQMVEFYLILAAVRKVPTSIFWKLLIGSLVMLIGGYLGEAGYIQPFVGFVIGMAGWIYILFEIFSGEAGTAAAKSGNKAMSTAFSAMRIIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGATTGG------------------------TTAATTACTGTGCCACTTCAAATGGTAGAATTCTATCTAATCTTGGCAGCT---------GTA---AGAAAGGTGCCAACT---TCTATA------------------------------------TTCTGGAAA---CTATTAATTGGTTCTTTAGTGATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------CAACCA------------------TTCGTAGGT---TTCGTAATTGGAATGGCTGGATGGATCTACATCTTGTTTGAAATA---------------TTC------TCA---GGTGAAGCTGGAACTGCAGCTGCAAAG------TCT---GGTAACAAGGCTATG---TCA---ACT---GCG---TTT---AGC---GCAATG---AGAATTATCGTAACAATA---------------------------------------------------------------GGATGG---------GCCATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDW--------LITVPLQMVEFYLILAA---V-RKVPT-SI------------FWK-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------QP------FVG-FVIGMAGWIYILFEI-----F--S-GEAGTAAAK--S-GNKAM-S-T-A-F-S-AM-RIIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU563306 [IV-Alpha8-SAR11/IMCC9063] L658_SurfaceC_env_samples_EU563306 gi|171770622|gb|EU563306| Uncultured microorganism clone L658 SurfaceC putative proteorhodopsin gene, partial cds Uncultured microorganism clone L658 SurfaceC putative proteorhodopsin gene, partial cds EU563306 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 Aug2002 Lake_L658_at_3m_depth other freshwater 49.13 -93.13 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na GGTTATATTGATTGGTTAATTACTGTACCTTTACTAATGCTAGAGTTTTACTTTGTATTAGCTGCAGTAAGAAAAGTACCAAGCTCAGTATTTTGGAAATTATTACTAGGTACATTAGTAATGTTAATAGGTGGATATGCCGGAGAAGCTGGTTATATGTCAGCTATGGTTGGTTTCATAATCGGAATGGCAGGATGGATTTACATTCTATATGAAGTCTTCTCAGGAGAAGCTGGATCATTAGCGGCTAAAAGCGGAAACAAATCTCTTAAAACTGCATTTAGTGCAATGAGAGTTATTGTAACTGTTGGATGGGCCGTCTACCCA GYIDWLITVPLLMLEFYFVLAAVRKVPSSVFWKLLLGTLVMLIGGYAGEAGYMSAMVGFIIGMAGWIYILYEVFSGEAGSLAAKSGNKSLKTAFSAMRVIVTVGWAVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTTATATTGATTGG------------------------TTAATTACTGTACCTTTACTAATGCTAGAGTTTTACTTTGTATTAGCTGCA---------GTA---AGAAAAGTACCAAGC---TCAGTA------------------------------------TTTTGGAAA---TTATTACTAGGTACATTAGTAATGTTAATAGGTGGATATGCCGGAGAA---------GCT------------------GGT------TAT---------------------------------ATG------------------------------------------------------------------TCAGCT------------------ATGGTTGGT---TTCATAATCGGAATGGCAGGATGGATTTACATTCTATATGAAGTC---------------TTC------TCA---GGAGAAGCTGGATCATTAGCGGCTAAA------AGC---GGAAACAAATCTCTT---AAA---ACT---GCA---TTT---AGT---GCAATG---AGAGTTATTGTAACTGTT---------------------------------------------------------------GGATGG---------GCCGTCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GYIDW--------LITVPLLMLEFYFVLAA---V-RKVPS-SV------------FWK-LLLGTLVMLIGGYAGE---A------G--Y-----------M----------------------SA------MVG-FIIGMAGWIYILYEV-----F--S-GEAGSLAAK--S-GNKSL-K-T-A-F-S-AM-RVIVTV---------------------GW---AVYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU563300 [IV-Alpha8-SAR11/IMCC9063] L658_SurfaceG_env_samples_EU563300 gi|171770610|gb|EU563300| Uncultured microorganism clone L658 SurfaceG putative proteorhodopsin gene, partial cds Uncultured microorganism clone L658 SurfaceG putative proteorhodopsin gene, partial cds EU563300 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 Aug2002 Lake_L658_at_3m_depth other freshwater 49.13 -93.13 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na ACAGGTTATATTGATTGGTTAATTACTGTACCTTTACTAATGCTAGAGTTTTACTTTGTATTAGCTGCAGTAAGAAAAGTACCAAGCTCAGTATTTTGGAAATTATTACTAGGTACATTAGTAATGTTAATAGGTGGATATGCCGGAGAAGCTGGTTATATGTCAGCTATGGTTGGTTTCATAATCGGAATGGCAGGATGGATTTACATTCTATATGAAGTCTTCTCAGGAGAAGCTGGATCATTAGCGGCTAAAAGCGGAAACAAATCTCTTAAAACTGCATTTAGTGCAATGAGAGTTATTGTAACTGTTGGATGGGCCGTCTACCCA TGYIDWLITVPLLMLEFYFVLAAVRKVPSSVFWKLLLGTLVMLIGGYAGEAGYMSAMVGFIIGMAGWIYILYEVFSGEAGSLAAKSGNKSLKTAFSAMRVIVTVGWAVYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGGTTATATTGATTGG------------------------TTAATTACTGTACCTTTACTAATGCTAGAGTTTTACTTTGTATTAGCTGCA---------GTA---AGAAAAGTACCAAGC---TCAGTA------------------------------------TTTTGGAAA---TTATTACTAGGTACATTAGTAATGTTAATAGGTGGATATGCCGGAGAA---------GCT------------------GGT------TAT---------------------------------ATG------------------------------------------------------------------TCAGCT------------------ATGGTTGGT---TTCATAATCGGAATGGCAGGATGGATTTACATTCTATATGAAGTC---------------TTC------TCA---GGAGAAGCTGGATCATTAGCGGCTAAA------AGC---GGAAACAAATCTCTT---AAA---ACT---GCA---TTT---AGT---GCAATG---AGAGTTATTGTAACTGTT---------------------------------------------------------------GGATGG---------GCCGTCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGYIDW--------LITVPLLMLEFYFVLAA---V-RKVPS-SV------------FWK-LLLGTLVMLIGGYAGE---A------G--Y-----------M----------------------SA------MVG-FIIGMAGWIYILYEV-----F--S-GEAGSLAAK--S-GNKSL-K-T-A-F-S-AM-RVIVTV---------------------GW---AVYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU563285 [IV-Alpha8-SAR11/IMCC9063] BTC_5A_15m_July_env_samples_EU563285 gi|171770580|gb|EU563285| Uncultured microorganism clone BTC 5A 15m July putative proteorhodopsin gene, partial cds Uncultured microorganism clone BTC 5A 15m July putative proteorhodopsin gene, partial cds EU563285 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 01-juil-06 Baltic_Sea_at_15m_depth Baltic Sea marine 57.32 20.05 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na CGTTATATTGATTGGTTAATTACTGTACCTTTACTAATGCTAGAGTTTTACTTTGTATTAGCCGCAGTAAGAAAAGTACCAAGCTCAGTATTTTGGAAATTATTACTAGGTACATTAGTAATGTTAATAGGTGGATATGCCGGAGAAGCTGGTTATATGTCAGCTATGGTTGGTTTCATAATCGGAATGGCAGGATGGATTTACATTCTATATGAAGTCTTCTCAGGAGAAGCTGGATCATTAGCGGCTAAAAGCGGAAACAAATCTCTTAAAACTGCATTTAGTGCAATGAGAGTTATTGTAACTGTTGGATGGGCCGTGTACCCA RYIDWLITVPLLMLEFYFVLAAVRKVPSSVFWKLLLGTLVMLIGGYAGEAGYMSAMVGFIIGMAGWIYILYEVFSGEAGSLAAKSGNKSLKTAFSAMRVIVTVGWAVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTATATTGATTGG------------------------TTAATTACTGTACCTTTACTAATGCTAGAGTTTTACTTTGTATTAGCCGCA---------GTA---AGAAAAGTACCAAGC---TCAGTA------------------------------------TTTTGGAAA---TTATTACTAGGTACATTAGTAATGTTAATAGGTGGATATGCCGGAGAA---------GCT------------------GGT------TAT---------------------------------ATG------------------------------------------------------------------TCAGCT------------------ATGGTTGGT---TTCATAATCGGAATGGCAGGATGGATTTACATTCTATATGAAGTC---------------TTC------TCA---GGAGAAGCTGGATCATTAGCGGCTAAA------AGC---GGAAACAAATCTCTT---AAA---ACT---GCA---TTT---AGT---GCAATG---AGAGTTATTGTAACTGTT---------------------------------------------------------------GGATGG---------GCCGTGTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLAA---V-RKVPS-SV------------FWK-LLLGTLVMLIGGYAGE---A------G--Y-----------M----------------------SA------MVG-FIIGMAGWIYILYEV-----F--S-GEAGSLAAK--S-GNKSL-K-T-A-F-S-AM-RVIVTV---------------------GW---AVYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU563289 [IV-Alpha8-SAR11/IMCC9063] BTC_4F_15m_July_env_samples_EU563289 gi|171770588|gb|EU563289| Uncultured microorganism clone BTC 4F 15m July putative proteorhodopsin gene, partial cds Uncultured microorganism clone BTC 4F 15m July putative proteorhodopsin gene, partial cds EU563289 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 01-juil-06 Baltic_Sea_at_15m_depth Baltic Sea marine 57.32 20.05 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na AGGTATATTGATTGGTTAATTACTGTACCTTTACTAATGCTAGAGTTTTACTTTGTATTAGCTGCAGTAAGAAAAGTACCAAGCTCAGTATTTTGGAAATTATTACTAGGTACATTAGTAATGTTAATAGGTGGATATGCCGGAGAAGCTGGTTATATGTCAGCTATGGTTGGTTTCATAATCGGAATGGCAGGATGGATTTACATTCTATATGAAGTCTTCTCAGGAGAAGCTGGATCATTAGCGGCTAAAAGCGGAAACAAATCTCTTAAAACTGCATTTAGTGCAATGAGAGTTATTGTAACTGTTGGGTGGGCAATCTACCCA RYIDWLITVPLLMLEFYFVLAAVRKVPSSVFWKLLLGTLVMLIGGYAGEAGYMSAMVGFIIGMAGWIYILYEVFSGEAGSLAAKSGNKSLKTAFSAMRVIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTATATTGATTGG------------------------TTAATTACTGTACCTTTACTAATGCTAGAGTTTTACTTTGTATTAGCTGCA---------GTA---AGAAAAGTACCAAGC---TCAGTA------------------------------------TTTTGGAAA---TTATTACTAGGTACATTAGTAATGTTAATAGGTGGATATGCCGGAGAA---------GCT------------------GGT------TAT---------------------------------ATG------------------------------------------------------------------TCAGCT------------------ATGGTTGGT---TTCATAATCGGAATGGCAGGATGGATTTACATTCTATATGAAGTC---------------TTC------TCA---GGAGAAGCTGGATCATTAGCGGCTAAA------AGC---GGAAACAAATCTCTT---AAA---ACT---GCA---TTT---AGT---GCAATG---AGAGTTATTGTAACTGTT---------------------------------------------------------------GGGTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLAA---V-RKVPS-SV------------FWK-LLLGTLVMLIGGYAGE---A------G--Y-----------M----------------------SA------MVG-FIIGMAGWIYILYEV-----F--S-GEAGSLAAK--S-GNKSL-K-T-A-F-S-AM-RVIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU563288 [IV-Alpha8-SAR11/IMCC9063] BTC_20B_50m_July_env_samples_EU563288 gi|171770586|gb|EU563288| Uncultured microorganism clone BTC 20B 50m July putative proteorhodopsin gene, partial cds Uncultured microorganism clone BTC 20B 50m July putative proteorhodopsin gene, partial cds EU563288 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 01-juil-06 Baltic_Sea_at_50m_depth Baltic Sea marine 57.32 20.05 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na CGGTATATTGATTGGTTAATTACTGTACCTTTACTAATGCTAGAGTTTTACTTTGTATTAGCCGCAGTAAGAAAAGTACCAAGCTCAGTATTTTGGAAATTATTACTAGGTACATTAGTAATGTTAATAGGTGGATATGCCGGAGAAGCTGGTTATATGTCAGCTATGGTTGGTTTCATAATCGGAATGGCAGGATGGATTTACATTCTATATGAAGTCTTCTCAGGAGAAGCTGGATCATTAGCGGCTAAAAGCGGAAACAAATCTCTTAAAACTGCATTTAGTGCAATGAGAGTTATTGTAACTGTTGGTTGGGCCGTCTACCCA RYIDWLITVPLLMLEFYFVLAAVRKVPSSVFWKLLLGTLVMLIGGYAGEAGYMSAMVGFIIGMAGWIYILYEVFSGEAGSLAAKSGNKSLKTAFSAMRVIVTVGWAVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTATATTGATTGG------------------------TTAATTACTGTACCTTTACTAATGCTAGAGTTTTACTTTGTATTAGCCGCA---------GTA---AGAAAAGTACCAAGC---TCAGTA------------------------------------TTTTGGAAA---TTATTACTAGGTACATTAGTAATGTTAATAGGTGGATATGCCGGAGAA---------GCT------------------GGT------TAT---------------------------------ATG------------------------------------------------------------------TCAGCT------------------ATGGTTGGT---TTCATAATCGGAATGGCAGGATGGATTTACATTCTATATGAAGTC---------------TTC------TCA---GGAGAAGCTGGATCATTAGCGGCTAAA------AGC---GGAAACAAATCTCTT---AAA---ACT---GCA---TTT---AGT---GCAATG---AGAGTTATTGTAACTGTT---------------------------------------------------------------GGTTGG---------GCCGTCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLAA---V-RKVPS-SV------------FWK-LLLGTLVMLIGGYAGE---A------G--Y-----------M----------------------SA------MVG-FIIGMAGWIYILYEV-----F--S-GEAGSLAAK--S-GNKSL-K-T-A-F-S-AM-RVIVTV---------------------GW---AVYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU563291 [IV-Alpha8-SAR11/IMCC9063] BTC_3E_0m_July_env_samples_EU563291 gi|171770592|gb|EU563291| Uncultured microorganism clone BTC 3E 0m July putative proteorhodopsin gene, partial cds Uncultured microorganism clone BTC 3E 0m July putative proteorhodopsin gene, partial cds EU563291 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 01-juil-06 Baltic_Sea_at_0m_depth Baltic Sea marine 57.32 20.05 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na CGGTATATAGATTGGTTAATTACTGTACCTTTACTAATGCTAGAGTTTTACTTTGTATTAGCTGCAGTAAGAAAAGTACCAAGCTCAGTATTTTGGAAATTATTACTAGGTACATTAGTAATGTTAATAGGTGGATATGCCGGAGAAGCTGGTTATATGTCAGCTATGGTTGGTTTCATAATCGGAATGGCAGGATGGATTTACATTCTATATGAAGTCTTCTCAGGAGAAGCTGGATCATTAGCGGCTAAAAGCGGAAACAAATCTCTTAAAACTGCATTTAGTGCAATGAGAGTTATTGTAACTGTTGGCTGGGCTGTCTATCCA RYIDWLITVPLLMLEFYFVLAAVRKVPSSVFWKLLLGTLVMLIGGYAGEAGYMSAMVGFIIGMAGWIYILYEVFSGEAGSLAAKSGNKSLKTAFSAMRVIVTVGWAVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTATATAGATTGG------------------------TTAATTACTGTACCTTTACTAATGCTAGAGTTTTACTTTGTATTAGCTGCA---------GTA---AGAAAAGTACCAAGC---TCAGTA------------------------------------TTTTGGAAA---TTATTACTAGGTACATTAGTAATGTTAATAGGTGGATATGCCGGAGAA---------GCT------------------GGT------TAT---------------------------------ATG------------------------------------------------------------------TCAGCT------------------ATGGTTGGT---TTCATAATCGGAATGGCAGGATGGATTTACATTCTATATGAAGTC---------------TTC------TCA---GGAGAAGCTGGATCATTAGCGGCTAAA------AGC---GGAAACAAATCTCTT---AAA---ACT---GCA---TTT---AGT---GCAATG---AGAGTTATTGTAACTGTT---------------------------------------------------------------GGCTGG---------GCTGTCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLAA---V-RKVPS-SV------------FWK-LLLGTLVMLIGGYAGE---A------G--Y-----------M----------------------SA------MVG-FIIGMAGWIYILYEV-----F--S-GEAGSLAAK--S-GNKSL-K-T-A-F-S-AM-RVIVTV---------------------GW---AVYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU563303 [IV-Alpha8-SAR11/IMCC9063] L658_SurfaceE_env_samples_EU563303 gi|171770616|gb|EU563303| Uncultured microorganism clone L658 SurfaceE putative proteorhodopsin gene, partial cds Uncultured microorganism clone L658 SurfaceE putative proteorhodopsin gene, partial cds EU563303 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 Aug2002 Lake_L658_at_3m_depth other freshwater 49.13 -93.13 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na AGTTATGTGGATTGGTTAATTACTGTACCTTTACTAATGCTAGAGTTTTACTTTGTATTAGCCGCAGTAAGAAAAGTACCAAGCTCAGTATTTTGGAAATTATTACTAGGTACATTAGTAATGTTAATAGGTGGATATGCCGGAGAAGCTGGTTATATGTCAGCTATGGTTGGTTTCATAATCGGAATGGCAGGATGGATTTACATTCTATATGAAGTCTTCTCAGGAGAAGCTGGATCATTAGCGGCTAAAAGCGGAAACAAATCTCTTAAAACTGCATTTAGTGCAATGAGAGTTATTGTAACTGTTGGATGGGCTGTAATCCAAGCT SYVDWLITVPLLMLEFYFVLAAVRKVPSSVFWKLLLGTLVMLIGGYAGEAGYMSAMVGFIIGMAGWIYILYEVFSGEAGSLAAKSGNKSLKTAFSAMRVIVTVGWAVIQA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTTATGTGGATTGG------------------------TTAATTACTGTACCTTTACTAATGCTAGAGTTTTACTTTGTATTAGCCGCA---------GTA---AGAAAAGTACCAAGC---TCAGTA------------------------------------TTTTGGAAA---TTATTACTAGGTACATTAGTAATGTTAATAGGTGGATATGCCGGAGAA---------GCT------------------GGT------TAT---------------------------------ATG------------------------------------------------------------------TCAGCT------------------ATGGTTGGT---TTCATAATCGGAATGGCAGGATGGATTTACATTCTATATGAAGTC---------------TTC------TCA---GGAGAAGCTGGATCATTAGCGGCTAAA------AGC---GGAAACAAATCTCTT---AAA---ACT---GCA---TTT---AGT---GCAATG---AGAGTTATTGTAACTGTT---------------------------------------------------------------GGATGG---------GCTGTAATCCAAGCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYVDW--------LITVPLLMLEFYFVLAA---V-RKVPS-SV------------FWK-LLLGTLVMLIGGYAGE---A------G--Y-----------M----------------------SA------MVG-FIIGMAGWIYILYEV-----F--S-GEAGSLAAK--S-GNKSL-K-T-A-F-S-AM-RVIVTV---------------------GW---AVIQA------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU563296 [IV-Alpha8-SAR11/IMCC9063] Kin_2m_July07A_env_samples_EU563296 gi|171770602|gb|EU563296| Uncultured microorganism clone Kin 2m July07A putative proteorhodopsin gene, partial cds Uncultured microorganism clone Kin 2m July07A putative proteorhodopsin gene, partial cds EU563296 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 01-juil-07 Lake_Kinneret_at_2m_depth other freshwater 32.08 35.07 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na AGGTATATAGATTGGTTAATTACTGTACCTTTACTAATGCTAGAGTTTTACTTTGTATTAGCCGCAGTAAGAAAAGTACCAAGCTCAGTATTTTGGAAATTATTACTAGGTACATTAGTAATGTTAATAGGTGGATATGCCGGAGAAGCTGGTTATATGTCAGCTATGGTTGGTTTCATAATCGGAATGGCAGGATGGATTTACATTCTATATGAAGTCTTCTCAGGAGAAGCTGGATCATTAGCGGCTAAAAGCGGAAACAAATCTCTTAAAACTGCATTTAGTGCAATGAGAGTTATTGTAACTGTTGGCTGGGCAGTATATCCA RYIDWLITVPLLMLEFYFVLAAVRKVPSSVFWKLLLGTLVMLIGGYAGEAGYMSAMVGFIIGMAGWIYILYEVFSGEAGSLAAKSGNKSLKTAFSAMRVIVTVGWAVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTATATAGATTGG------------------------TTAATTACTGTACCTTTACTAATGCTAGAGTTTTACTTTGTATTAGCCGCA---------GTA---AGAAAAGTACCAAGC---TCAGTA------------------------------------TTTTGGAAA---TTATTACTAGGTACATTAGTAATGTTAATAGGTGGATATGCCGGAGAA---------GCT------------------GGT------TAT---------------------------------ATG------------------------------------------------------------------TCAGCT------------------ATGGTTGGT---TTCATAATCGGAATGGCAGGATGGATTTACATTCTATATGAAGTC---------------TTC------TCA---GGAGAAGCTGGATCATTAGCGGCTAAA------AGC---GGAAACAAATCTCTT---AAA---ACT---GCA---TTT---AGT---GCAATG---AGAGTTATTGTAACTGTT---------------------------------------------------------------GGCTGG---------GCAGTATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLAA---V-RKVPS-SV------------FWK-LLLGTLVMLIGGYAGE---A------G--Y-----------M----------------------SA------MVG-FIIGMAGWIYILYEV-----F--S-GEAGSLAAK--S-GNKSL-K-T-A-F-S-AM-RVIVTV---------------------GW---AVYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU563302 [IV-Alpha8-SAR11/IMCC9063] L658_SurfaceH_env_samples_EU563302 gi|171770614|gb|EU563302| Uncultured microorganism clone L658 SurfaceH putative proteorhodopsin gene, partial cds Uncultured microorganism clone L658 SurfaceH putative proteorhodopsin gene, partial cds EU563302 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 Aug2002 Lake_L658_at_3m_depth other freshwater 49.13 -93.13 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na AGGTATATAGATTGGTTAATTACTGTACCTTTACTAATGCTAGAGTTTTACTTTGTATTAGCCGCAGTAAGAAAAGTACCAAGCTCAGTATTTTGGAAATTATTACTAGGTACATTAGTAATGTTAATAGGTGGATATGCCGGAGAAGCTGGTTATATGTCAGCTATGGTTGGTTTCATAATCGGAATGGCAGGATGGATTTACATTCTATATGAAGTCTTCTCAGGAGAAGCTGGATCATTAGCGGCTAAAAGCGGAAACAAATCTCTTAAAACTGCATTTAGTGCAATGAGAGTTATTGTAACTGTTGGCTGGGCAGTATATCCA RYIDWLITVPLLMLEFYFVLAAVRKVPSSVFWKLLLGTLVMLIGGYAGEAGYMSAMVGFIIGMAGWIYILYEVFSGEAGSLAAKSGNKSLKTAFSAMRVIVTVGWAVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTATATAGATTGG------------------------TTAATTACTGTACCTTTACTAATGCTAGAGTTTTACTTTGTATTAGCCGCA---------GTA---AGAAAAGTACCAAGC---TCAGTA------------------------------------TTTTGGAAA---TTATTACTAGGTACATTAGTAATGTTAATAGGTGGATATGCCGGAGAA---------GCT------------------GGT------TAT---------------------------------ATG------------------------------------------------------------------TCAGCT------------------ATGGTTGGT---TTCATAATCGGAATGGCAGGATGGATTTACATTCTATATGAAGTC---------------TTC------TCA---GGAGAAGCTGGATCATTAGCGGCTAAA------AGC---GGAAACAAATCTCTT---AAA---ACT---GCA---TTT---AGT---GCAATG---AGAGTTATTGTAACTGTT---------------------------------------------------------------GGCTGG---------GCAGTATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLAA---V-RKVPS-SV------------FWK-LLLGTLVMLIGGYAGE---A------G--Y-----------M----------------------SA------MVG-FIIGMAGWIYILYEV-----F--S-GEAGSLAAK--S-GNKSL-K-T-A-F-S-AM-RVIVTV---------------------GW---AVYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU563298 [IV-Alpha8-SAR11/IMCC9063] Fos_11_VA_env_samples_EU563298 gi|171770606|gb|EU563298| Uncultured microorganism clone Fos 11 VA putative proteorhodopsin gene, partial cds Uncultured microorganism clone Fos 11 VA putative proteorhodopsin gene, partial cds EU563298 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 2003 Lake_Kinneret other freshwater 32.08 35.07 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na AGGTATATAGATTGGTTAATTACTGTACCTTTACTAATGCTAGAGTTTTACTTTGTATTAGCCGCAGTAAGAAAAGTACCAAGCTCAGTATTTTGGAAATTATTACTAGGTACATTAGTAATGTTAATAGGTGGATATGCCGGAGAAGCTGGTTATATGTCAGCTATGGTTGGTTTCATAATCGGAATGGCAGGATGGATTTACATTCTATATGAAGTCTTCTCAGGAGAAGCTGGATCATTAGCGGCTAAAAGCGGAAACAAATCTCTTAAAACTGCATTTAGTGCAATGAGAGTTATTGTAACTGTTGGCTGGGCCGTTTATCCA RYIDWLITVPLLMLEFYFVLAAVRKVPSSVFWKLLLGTLVMLIGGYAGEAGYMSAMVGFIIGMAGWIYILYEVFSGEAGSLAAKSGNKSLKTAFSAMRVIVTVGWAVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTATATAGATTGG------------------------TTAATTACTGTACCTTTACTAATGCTAGAGTTTTACTTTGTATTAGCCGCA---------GTA---AGAAAAGTACCAAGC---TCAGTA------------------------------------TTTTGGAAA---TTATTACTAGGTACATTAGTAATGTTAATAGGTGGATATGCCGGAGAA---------GCT------------------GGT------TAT---------------------------------ATG------------------------------------------------------------------TCAGCT------------------ATGGTTGGT---TTCATAATCGGAATGGCAGGATGGATTTACATTCTATATGAAGTC---------------TTC------TCA---GGAGAAGCTGGATCATTAGCGGCTAAA------AGC---GGAAACAAATCTCTT---AAA---ACT---GCA---TTT---AGT---GCAATG---AGAGTTATTGTAACTGTT---------------------------------------------------------------GGCTGG---------GCCGTTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLAA---V-RKVPS-SV------------FWK-LLLGTLVMLIGGYAGE---A------G--Y-----------M----------------------SA------MVG-FIIGMAGWIYILYEV-----F--S-GEAGSLAAK--S-GNKSL-K-T-A-F-S-AM-RVIVTV---------------------GW---AVYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU563305 [IV-Alpha8-SAR11/IMCC9063] L658_SurfaceB_env_samples_EU563305 gi|171770620|gb|EU563305| Uncultured microorganism clone L658 SurfaceB putative proteorhodopsin gene, partial cds Uncultured microorganism clone L658 SurfaceB putative proteorhodopsin gene, partial cds EU563305 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 Aug2002 Lake_L658_at_3m_depth other freshwater 49.13 -93.13 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na AGGGATATAGACTGGTTAATTACTGTACCTTTACTAATGCTAGAGTTTTACTTTGTATTAGCCGCAGTAAGAAAAGTACCAAGCTCAGTATTTTGGAAATTATTACTAGGTACATTAGTAATGTTAATAGGTGGATATGCCGGAGAAGCTGGTTATATGTCAGCTATGGTTGGTTTCATAATCGGAATGGCAGGATGGATTTACATTCTATATGAAGTCTTCTCAGGAGAAGCTGGATCATTAGCGGCTAAAAGCGGAAACAAATCTCTTAAAACTGCATTTAGTGCAATGAGAGTTATTGTAACTGTTGGATGGGCGGTATACCCA RDIDWLITVPLLMLEFYFVLAAVRKVPSSVFWKLLLGTLVMLIGGYAGEAGYMSAMVGFIIGMAGWIYILYEVFSGEAGSLAAKSGNKSLKTAFSAMRVIVTVGWAVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGGATATAGACTGG------------------------TTAATTACTGTACCTTTACTAATGCTAGAGTTTTACTTTGTATTAGCCGCA---------GTA---AGAAAAGTACCAAGC---TCAGTA------------------------------------TTTTGGAAA---TTATTACTAGGTACATTAGTAATGTTAATAGGTGGATATGCCGGAGAA---------GCT------------------GGT------TAT---------------------------------ATG------------------------------------------------------------------TCAGCT------------------ATGGTTGGT---TTCATAATCGGAATGGCAGGATGGATTTACATTCTATATGAAGTC---------------TTC------TCA---GGAGAAGCTGGATCATTAGCGGCTAAA------AGC---GGAAACAAATCTCTT---AAA---ACT---GCA---TTT---AGT---GCAATG---AGAGTTATTGTAACTGTT---------------------------------------------------------------GGATGG---------GCGGTATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RDIDW--------LITVPLLMLEFYFVLAA---V-RKVPS-SV------------FWK-LLLGTLVMLIGGYAGE---A------G--Y-----------M----------------------SA------MVG-FIIGMAGWIYILYEV-----F--S-GEAGSLAAK--S-GNKSL-K-T-A-F-S-AM-RVIVTV---------------------GW---AVYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU563290 [IV-Alpha8-SAR11/IMCC9063] BTC_3M_0mJuly_env_samples_EU563290 gi|171770590|gb|EU563290| Uncultured microorganism clone BTC 3M 0mJuly putative proteorhodopsin gene, partial cds Uncultured microorganism clone BTC 3M 0mJuly putative proteorhodopsin gene, partial cds EU563290 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 01-juil-06 Baltic_Sea_at_0m_depth Baltic Sea marine 57.32 20.05 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na AGCTATATAGATTGGTTAATTACTGTACCTTTACTAATGCTAGAGTTTTACTTTGTATTAGCCGCAGTAAGAAAAGTACCAAGCTCAGTATTTTGGAAATTATTACTAGGTACATTAGTAATGTTAATAGGTGGATATGCCGGAGAAGCTGGTTATATGTCAGCTATGGTTGGTTTCATAATCGGAATGGCAGGATGGATTTACATTCTATATGAAGTCTTCTCAGGAGAAGCTGGATCATTAGCGGCTAAAAGCGGAAACAAATCTCTTAAAACTGCATTTAGTGCAATGAGAGTTATTGTAACTGTTGGATGGGCAGTTTACCCA SYIDWLITVPLLMLEFYFVLAAVRKVPSSVFWKLLLGTLVMLIGGYAGEAGYMSAMVGFIIGMAGWIYILYEVFSGEAGSLAAKSGNKSLKTAFSAMRVIVTVGWAVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATAGATTGG------------------------TTAATTACTGTACCTTTACTAATGCTAGAGTTTTACTTTGTATTAGCCGCA---------GTA---AGAAAAGTACCAAGC---TCAGTA------------------------------------TTTTGGAAA---TTATTACTAGGTACATTAGTAATGTTAATAGGTGGATATGCCGGAGAA---------GCT------------------GGT------TAT---------------------------------ATG------------------------------------------------------------------TCAGCT------------------ATGGTTGGT---TTCATAATCGGAATGGCAGGATGGATTTACATTCTATATGAAGTC---------------TTC------TCA---GGAGAAGCTGGATCATTAGCGGCTAAA------AGC---GGAAACAAATCTCTT---AAA---ACT---GCA---TTT---AGT---GCAATG---AGAGTTATTGTAACTGTT---------------------------------------------------------------GGATGG---------GCAGTTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMLEFYFVLAA---V-RKVPS-SV------------FWK-LLLGTLVMLIGGYAGE---A------G--Y-----------M----------------------SA------MVG-FIIGMAGWIYILYEV-----F--S-GEAGSLAAK--S-GNKSL-K-T-A-F-S-AM-RVIVTV---------------------GW---AVYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU563286 [IV-Alpha8-SAR11/IMCC9063] BTC_6E_15m_July_env_samples_EU563286 gi|171770582|gb|EU563286| Uncultured microorganism clone BTC 6E 15m July putative proteorhodopsin gene, partial cds Uncultured microorganism clone BTC 6E 15m July putative proteorhodopsin gene, partial cds EU563286 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 01-juil-06 Baltic_Sea_at_15m_depth Baltic Sea marine 57.32 20.05 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na CGATATATAGATTGGTTAATTACTGTACCTTTACTAATGCTAGAGTTTTACTTTGTATTAGCCGCAGTAAGAAAAGTACCAAGCTCAGTATTTTGGAAATTATTACTAGGTACATTAGTAATGTTAATAGGTGGATATGCCGGAGAAGCTGGTTATATGTCAGCTATGGTTGGTTTCATAATCGGAATGGCAGGATGGATTTACATTCTATATGAAGTCTTCTCAGGAGAAGCTGGATCATTAGCAGCTAAAAGCGGAAACAAATCTCTTAAAACTGCATTTAGTGCAATGAGAGTTATTGTAACTGTTGGATGGGCAGTTTACCCA RYIDWLITVPLLMLEFYFVLAAVRKVPSSVFWKLLLGTLVMLIGGYAGEAGYMSAMVGFIIGMAGWIYILYEVFSGEAGSLAAKSGNKSLKTAFSAMRVIVTVGWAVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATATATAGATTGG------------------------TTAATTACTGTACCTTTACTAATGCTAGAGTTTTACTTTGTATTAGCCGCA---------GTA---AGAAAAGTACCAAGC---TCAGTA------------------------------------TTTTGGAAA---TTATTACTAGGTACATTAGTAATGTTAATAGGTGGATATGCCGGAGAA---------GCT------------------GGT------TAT---------------------------------ATG------------------------------------------------------------------TCAGCT------------------ATGGTTGGT---TTCATAATCGGAATGGCAGGATGGATTTACATTCTATATGAAGTC---------------TTC------TCA---GGAGAAGCTGGATCATTAGCAGCTAAA------AGC---GGAAACAAATCTCTT---AAA---ACT---GCA---TTT---AGT---GCAATG---AGAGTTATTGTAACTGTT---------------------------------------------------------------GGATGG---------GCAGTTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLAA---V-RKVPS-SV------------FWK-LLLGTLVMLIGGYAGE---A------G--Y-----------M----------------------SA------MVG-FIIGMAGWIYILYEV-----F--S-GEAGSLAAK--S-GNKSL-K-T-A-F-S-AM-RVIVTV---------------------GW---AVYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU563297 [IV-Alpha8-SAR11/IMCC9063] Kin_2m_JulyD_env_samples_EU563297 gi|171770604|gb|EU563297| Uncultured microorganism clone Kin 2m JulyD putative proteorhodopsin gene, partial cds Uncultured microorganism clone Kin 2m JulyD putative proteorhodopsin gene, partial cds EU563297 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 01-juil-07 Lake_Kinneret_at_2m_depth other freshwater 32.08 35.07 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na AGTTATATAGATTGGTTAATTACTGTACCTTTACTAATGCTAGAGTTTTACTTTGTATTAGCCGCAGTAAGAAAAGTACCAAGCTCAGTATTTTGGAAATTATTACTAGGTACATTAGTAATGTTAATAGGTGGATATGCCGGAGAAGCTGGTTATATGTCAGCTATGGTTGGTTTCATAATCGGAATGGCAGGATGGATTTACATTCTATATGAAGTCTTCTCAGGAGAAGCTGGATCATTGGCGGCTAAAAGCGGAAACAAATCTCTTAAAACTGCATTTAGTGCAATGAGAGTTATTGTAACTGTTGGATGGGCCATTTACCCA SYIDWLITVPLLMLEFYFVLAAVRKVPSSVFWKLLLGTLVMLIGGYAGEAGYMSAMVGFIIGMAGWIYILYEVFSGEAGSLAAKSGNKSLKTAFSAMRVIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTTATATAGATTGG------------------------TTAATTACTGTACCTTTACTAATGCTAGAGTTTTACTTTGTATTAGCCGCA---------GTA---AGAAAAGTACCAAGC---TCAGTA------------------------------------TTTTGGAAA---TTATTACTAGGTACATTAGTAATGTTAATAGGTGGATATGCCGGAGAA---------GCT------------------GGT------TAT---------------------------------ATG------------------------------------------------------------------TCAGCT------------------ATGGTTGGT---TTCATAATCGGAATGGCAGGATGGATTTACATTCTATATGAAGTC---------------TTC------TCA---GGAGAAGCTGGATCATTGGCGGCTAAA------AGC---GGAAACAAATCTCTT---AAA---ACT---GCA---TTT---AGT---GCAATG---AGAGTTATTGTAACTGTT---------------------------------------------------------------GGATGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMLEFYFVLAA---V-RKVPS-SV------------FWK-LLLGTLVMLIGGYAGE---A------G--Y-----------M----------------------SA------MVG-FIIGMAGWIYILYEV-----F--S-GEAGSLAAK--S-GNKSL-K-T-A-F-S-AM-RVIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU915906 [IV-Alpha8-SAR11/IMCC9063] US120211_env_samples_EU915906 gi|229358694|gb|EU915906| Uncultured microorganism clone US120211 putative proteorhodopsin gene, partial cds Uncultured microorganism clone US120211 putative proteorhodopsin gene, partial cds EU915906 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_surface_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTGGCCGCTACGGCTTTCTTCTTTTTAGAAAGAGGATCAGTTGCGCCTCAGTGGAGAGTTTCAATAACAGTAGCTGGACTAGTTACTGGTATCGCATTCATTCACTACATGTACATGAGAGATATTTGGATCGGAACTGGTGAGTCACCAACTGTTTACAGATATATTGACTGGTTAATTACAGTGCCTTTACTAATGCTAGAGTTTTATTTTGTATTAGCGGCAGTAAGAAAAGTACCAAGTTCAGTATTTTGGAAACTTTTAATAGGTTCATTAGTAATGTTAATAGGTGGTTATGCTGGAGAAGCTGGCTACGTATCAGCAATGGTAGGTTTCATAGTAGGAATGGCAGGATGGATATACATTCTGTTTGAAATTTTCTCAGGTGAAGCTGGAACATTAGCAGCTAAGAGTGGTAATAAATCTTTAGCAACTGCTTTCAGTGCTATGAGAATAATTGTTACTGTTGGCTGGGCCATTTAC MLAATAFFFLERGSVAPQWRVSITVAGLVTGIAFIHYMYMRDIWIGTGESPTVYRYIDWLITVPLLMLEFYFVLAAVRKVPSSVFWKLLIGSLVMLIGGYAGEAGYVSAMVGFIVGMAGWIYILFEIFSGEAGTLAAKSGNKSLATAFSAMRIIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACGGCTTTCTTCTTTTTAGAAAGAGGATCAGTTGCGCCT---CAGTGGAGAGTTTCAATAACAGTAGCTGGACTAGTTACTGGTATCGCATTCATTCACTACATGTACATGAGAGATATTTGGATC------------------------------GGAACT---------------------GGTGAGTCACCAACTGTTTACAGATATATTGACTGG------------------------TTAATTACAGTGCCTTTACTAATGCTAGAGTTTTATTTTGTATTAGCGGCA---------GTA---AGAAAAGTACCAAGT---TCAGTA------------------------------------TTTTGGAAA---CTTTTAATAGGTTCATTAGTAATGTTAATAGGTGGTTATGCTGGAGAA---------GCT------------------GGC------TAC---------------------------------GTA------------------------------------------------------------------TCAGCA------------------ATGGTAGGT---TTCATAGTAGGAATGGCAGGATGGATATACATTCTGTTTGAAATT---------------TTC------TCA---GGTGAAGCTGGAACATTAGCAGCTAAG------AGT---GGTAATAAATCTTTA---GCA---ACT---GCT---TTC---AGT---GCTATG---AGAATAATTGTTACTGTT---------------------------------------------------------------GGCTGG---------GCCATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFLERGSVAP-QWRVSITVAGLVTGIAFIHYMYMRDIWI----------GT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-RKVPS-SV------------FWK-LLIGSLVMLIGGYAGE---A------G--Y-----------V----------------------SA------MVG-FIVGMAGWIYILFEI-----F--S-GEAGTLAAK--S-GNKSL-A-T-A-F-S-AM-RIIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_JX863322 [IV-Alpha8-SAR11/IMCC9063] MALINA_OTU49_260_L_env_samples_JX863322 gi|425477594|gb|JX863322| Uncultured bacterium clone MALINA OTU49 260 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU49 260 L putative proteorhodopsin mRNA, partial cds JX863322 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 11Aug2009 3m_depth Arctic Ocean marine 70.68 -139.62 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATTACAGTGCCTTTACTAATGCTTGAGTTCTATTTTGTATTAGCAGCTGTAAAAAAAGTACCAACAGCAGTATTCTGGAAACTTTTAATAGGTTCTTTAGTAATGTTAATTGGTGGTTATGCCGGAGAAGCTGGTTATGTATCAGCAATGGTTGGTTTCATAGTAGGAATGGCAGGTTGGATATACATTCTTTATGAAATATTCTCAGGAGAAGCCGGCACAATAGCTGCTAAGAGTGGAAACAAATCTCTAATCACTGCGTTCAGTGCAATGAGAATAATTGTTACTGTT WLITVPLLMLEFYFVLAAVKKVPTAVFWKLLIGSLVMLIGGYAGEAGYVSAMVGFIVGMAGWIYILYEIFSGEAGTIAAKSGNKSLITAFSAMRIIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATTACAGTGCCTTTACTAATGCTTGAGTTCTATTTTGTATTAGCAGCT---------GTA---AAAAAAGTACCAACA---GCAGTA------------------------------------TTCTGGAAA---CTTTTAATAGGTTCTTTAGTAATGTTAATTGGTGGTTATGCCGGAGAA---------GCT------------------GGT------TAT---------------------------------GTA------------------------------------------------------------------TCAGCA------------------ATGGTTGGT---TTCATAGTAGGAATGGCAGGTTGGATATACATTCTTTATGAAATA---------------TTC------TCA---GGAGAAGCCGGCACAATAGCTGCTAAG------AGT---GGAAACAAATCTCTA---ATC---ACT---GCG---TTC---AGT---GCAATG---AGAATAATTGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMLEFYFVLAA---V-KKVPT-AV------------FWK-LLIGSLVMLIGGYAGE---A------G--Y-----------V----------------------SA------MVG-FIVGMAGWIYILYEI-----F--S-GEAGTIAAK--S-GNKSL-I-T-A-F-S-AM-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EF088612 [IV-Alpha8-SAR11/IMCC9063] E400057_env_samples_EF088612 gi|126843465|gb|EF088612| Uncultured bacterium clone E400057 putative proteorhodopsin gene, partial cds Uncultured bacterium clone E400057 putative proteorhodopsin gene, partial cds EF088612 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na Bering_Sea_surface_water_sample Arctic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTAGCCGCTACTGCTTTCTTCTTTTTAGAAAGAGGATCTGTTGCACCTGCTTGGAGAGTTTCAATAACAGTAGCGGGACTAGTAACTGGTATCGCATTCATACACTACATGTACATGAGAGAAGTATGGATCGGAACTGGCGAGTCACCAACTGTTTACAGATATATTGATTGGTTAATCACTGTGCCTTTACTAATGCTTGAGTTCTATTTTGTATTAGCAGCTGTGAAAAAAGTGCCAAGTTCAGTATTCTGGAAACTTTTATTAGGTTCTTTAGTAATGCTTATAGGTGGTTACCTAGGTGAAGCTGGTTACATGCAACCATTTGTTGGTTTTGTAATCGGAATGGCTGGCTGGATATATATTTTATTTGAAATATTTTCAGGTGAAGCTGGAACACTTGCAGCGAAAGCTGGTAACAAGTCATTACAAACTGCATTCAGTGCAATGAGAATAATCGTTACAATTGGTTGGGCGATCTACCCA MVAATAFFFLERGSVAPAWRVSITVAGLVTGIAFIHYMYMREVWIGTGESPTVYRYIDWLITVPLLMLEFYFVLAAVKKVPSSVFWKLLLGSLVMLIGGYLGEAGYMQPFVGFVIGMAGWIYILFEIFSGEAGTLAAKAGNKSLQTAFSAMRIIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGCTTTCTTCTTTTTAGAAAGAGGATCTGTTGCACCT---GCTTGGAGAGTTTCAATAACAGTAGCGGGACTAGTAACTGGTATCGCATTCATACACTACATGTACATGAGAGAAGTATGGATC------------------------------GGAACT---------------------GGCGAGTCACCAACTGTTTACAGATATATTGATTGG------------------------TTAATCACTGTGCCTTTACTAATGCTTGAGTTCTATTTTGTATTAGCAGCT---------GTG---AAAAAAGTGCCAAGT---TCAGTA------------------------------------TTCTGGAAA---CTTTTATTAGGTTCTTTAGTAATGCTTATAGGTGGTTACCTAGGTGAA---------GCT------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------CAACCA------------------TTTGTTGGT---TTTGTAATCGGAATGGCTGGCTGGATATATATTTTATTTGAAATA---------------TTT------TCA---GGTGAAGCTGGAACACTTGCAGCGAAA------GCT---GGTAACAAGTCATTA---CAA---ACT---GCA---TTC---AGT---GCAATG---AGAATAATCGTTACAATT---------------------------------------------------------------GGTTGG---------GCGATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLERGSVAP-AWRVSITVAGLVTGIAFIHYMYMREVWI----------GT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-KKVPS-SV------------FWK-LLLGSLVMLIGGYLGE---A------G--Y-----------M----------------------QP------FVG-FVIGMAGWIYILFEI-----F--S-GEAGTLAAK--A-GNKSL-Q-T-A-F-S-AM-RIIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU916073 [IV-Alpha8-SAR11/IMCC9063] clone_A150005_EU916073 gi|229359027|gb|EU916073| Uncultured bacterium clone A150005 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A150005 putative proteorhodopsin gene, partial cds. EU916073 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTAGCCGCTACTGCTTTCTTCTTTTTAGAAAGAGGATCCGTTGCACCTGCTTGGAGAGTTTCAATAACAGTAGCGGGACTAGTAACTGGTATCGCATTCATACACTACATGTACATGAGAGAAGTATGGATCGGTGAGTCACCAACTGTTTACAGATACATTGACTGGTTAATTACAGTGCCTTTACTAATGCTTGAGTTCTATTTTGTATTAGCAGCTGTAAAAGTACCAAGTTCAGTATTCTGGAAACTTTTAATCGGTTCTTTAGTAATGCTTATAGGTGGTTACCTAGGTGAAGCTGGTTACATGCAACCATTTGTTGGTTTTGTAATTGGGATGGCTGGCTGGATATATATTTTATTTGAAATATTTTCTGGCGAAGCAGGAACACTTGCAGCTAAAGCTGGTAACAAGTCATTACAAACTGCATTCAGTGCAATGAGAATAATTGTTACAATCGGTTGGGCAATTTAC MLAATAFFFLERGSVAPAWRVSITVAGLVTGIAFIHYMYMREVWIGESPTVYRYIDWLITVPLLMLEFYFVLAAVKVPSSVFWKLLIGSLVMLIGGYLGEAGYMQPFVGFVIGMAGWIYILFEIFSGEAGTLAAKAGNKSLQTAFSAMRIIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTAGCCGCTACTGCTTTCTTCTTTTTAGAAAGAGGATCCGTTGCACCT---GCTTGGAGAGTTTCAATAACAGTAGCGGGACTAGTAACTGGTATCGCATTCATACACTACATGTACATGAGAGAAGTATGGATC---------------------------------------------------------GGTGAGTCACCAACTGTTTACAGATACATTGACTGG------------------------TTAATTACAGTGCCTTTACTAATGCTTGAGTTCTATTTTGTATTAGCAGCT---------GTA------AAAGTACCAAGT---TCAGTA------------------------------------TTCTGGAAA---CTTTTAATCGGTTCTTTAGTAATGCTTATAGGTGGTTACCTAGGTGAA---------GCT------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------CAACCA------------------TTTGTTGGT---TTTGTAATTGGGATGGCTGGCTGGATATATATTTTATTTGAAATA---------------TTT------TCT---GGCGAAGCAGGAACACTTGCAGCTAAA------GCT---GGTAACAAGTCATTA---CAA---ACT---GCA---TTC---AGT---GCAATG---AGAATAATTGTTACAATC---------------------------------------------------------------GGTTGG---------GCAATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFLERGSVAP-AWRVSITVAGLVTGIAFIHYMYMREVWI-------------------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V--KVPS-SV------------FWK-LLIGSLVMLIGGYLGE---A------G--Y-----------M----------------------QP------FVG-FVIGMAGWIYILFEI-----F--S-GEAGTLAAK--A-GNKSL-Q-T-A-F-S-AM-RIIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926095 [IV-Alpha8-SAR11/IMCC9063] BOUM_OTU008_env_samples gb|KJ926095| Uncultured bacterium clone BOUM OTU008 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU008 putative proteorhodopsin gene, partial cds KJ926095 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 38.6308 7.9097 #na #na #na #na #na GTTGATTGGTTAATCACTGTACCTATGCAGATTGTTGAATTCTATTTAATCTTAGCTGCTGTTAGAAAAGTTCCAAGCTCAATGTTTTGGAGATTGCTAATAGCTTCAATAGTAATGTTAGTCGGTGGATATTTAGGAGAAGCCGGTTACATCCAAGAATTTGTCGGTTTCATAATTGGAATGGCAGGTTGGATATACATTCTATTTGAAATCTTTTCTGGTGAAGCTGGAAGAGCTGCTGCGAAGGGTGGTAACAGAGCTGTTGCTACGTGTTTCGGCGCTATGAGAATGATAGTTACAATTGGGTGGGCTATATAT VDWLITVPMQIVEFYLILAAVRKVPSSMFWRLLIASIVMLVGGYLGEAGYIQEFVGFIIGMAGWIYILFEIFSGEAGRAAAKGGNRAVATCFGAMRMIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGATTGG------------------------TTAATCACTGTACCTATGCAGATTGTTGAATTCTATTTAATCTTAGCTGCT---------GTT---AGAAAAGTTCCAAGC---TCAATG------------------------------------TTTTGGAGA---TTGCTAATAGCTTCAATAGTAATGTTAGTCGGTGGATATTTAGGAGAA---------GCC------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------CAAGAA------------------TTTGTCGGT---TTCATAATTGGAATGGCAGGTTGGATATACATTCTATTTGAAATC---------------TTT------TCT---GGTGAAGCTGGAAGAGCTGCTGCGAAG------GGT---GGTAACAGAGCTGTT---GCT---ACG---TGT---TTC---GGC---GCTATG---AGAATGATAGTTACAATT---------------------------------------------------------------GGGTGG---------GCTATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPMQIVEFYLILAA---V-RKVPS-SM------------FWR-LLIASIVMLVGGYLGE---A------G--Y-----------I----------------------QE------FVG-FIIGMAGWIYILFEI-----F--S-GEAGRAAAK--G-GNRAV-A-T-C-F-G-AM-RMIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU915827 [IV-Alpha8-SAR11/IMCC9063] PF12060_env_samples_EU915827 gi|229358536|gb|EU915827| Uncultured microorganism clone PF12060 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF12060 putative proteorhodopsin gene, partial cds EU915827 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTTGCCGCTACTGTATTCTTCTTTATTGAAAGAGGTACAGTTGCTGCGTCTTGGAGAACATCGGTAACAGTTGCAGGTCTAGTCTGCTTTGTTGCATTTGTTCACTACTGCTACATGAGAGAGATTTGGGTGACTTCAGGCGAAACACCGACAGTATACAGATATATTGATTGGTTAATCACTGTTCCACTTCAAATCATTGAATTCTATCTAGTCTTAGCTGCTGTTAGAAAAGTTCCAAGCTCAGTGTTTTGGAGACTGCTAATAGCTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAACTGGTTACATCCAAGAATTTGTCGGTTTCATAATTGGAATGGCAGGTTGGATATACATTCTATTTGAAATCTTTTCTGGAGAAGCTGGAAGAGCTGCTGCGAAGGGTGGTAACAGAGCTGTTGCTACGTGTTTCGGCGCTATGAGAATGATAGTTACAATTGGTTGGGCAATCTAC MVAATVFFFIERGTVAASWRTSVTVAGLVCFVAFVHYCYMREIWVTSGETPTVYRYIDWLITVPLQIIEFYLVLAAVRKVPSSVFWRLLIASLVMLIGGYLGETGYIQEFVGFIIGMAGWIYILFEIFSGEAGRAAAKGGNRAVATCFGAMRMIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTATTCTTCTTTATTGAAAGAGGTACAGTTGCTGCG---TCTTGGAGAACATCGGTAACAGTTGCAGGTCTAGTCTGCTTTGTTGCATTTGTTCACTACTGCTACATGAGAGAGATTTGGGTG------------------------------ACTTCA---------------------GGCGAAACACCGACAGTATACAGATATATTGATTGG------------------------TTAATCACTGTTCCACTTCAAATCATTGAATTCTATCTAGTCTTAGCTGCT---------GTT---AGAAAAGTTCCAAGC---TCAGTG------------------------------------TTTTGGAGA---CTGCTAATAGCTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------ACT------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------CAAGAA------------------TTTGTCGGT---TTCATAATTGGAATGGCAGGTTGGATATACATTCTATTTGAAATC---------------TTT------TCT---GGAGAAGCTGGAAGAGCTGCTGCGAAG------GGT---GGTAACAGAGCTGTT---GCT---ACG---TGT---TTC---GGC---GCTATG---AGAATGATAGTTACAATT---------------------------------------------------------------GGTTGG---------GCAATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFIERGTVAA-SWRTSVTVAGLVCFVAFVHYCYMREIWV----------TS-------GETPTVYRYIDW--------LITVPLQIIEFYLVLAA---V-RKVPS-SV------------FWR-LLIASLVMLIGGYLGE---T------G--Y-----------I----------------------QE------FVG-FIIGMAGWIYILFEI-----F--S-GEAGRAAAK--G-GNRAV-A-T-C-F-G-AM-RMIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU563327 [IV-Alpha8-SAR11/IMCC9063] L658_SurfaceD_env_samples_EU563327 gi|171770664|gb|EU563327| Uncultured microorganism clone L658 SurfaceD putative proteorhodopsin gene, partial cds Uncultured microorganism clone L658 SurfaceD putative proteorhodopsin gene, partial cds EU563327 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 Aug2002 Lake_L658_at_3m_depth other freshwater 49.13 -93.13 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na CGCTATATTGATTGGCTGATTACCGTGCCGCTGCTGATGCTGGAATTTTATTTTGTGCTGGCGGCGGTGCGCAAAGTGCCGAGCAGCGTGTTTTGGAAACTGCTGCTGGGCACCCTGGTGATGCTGATTGGCGGCTATGCGGGCGAAGCGGGCTATATGAGCGCGATGGTGGGCTTTATTATTGGCATGGCGGGCTGGATTTATATTCTGTATGAAGTGTTTAGCGGCGAAGCGGGCAGCCTGGCGGCGAAAAGCGGCAACAAAAGCCTGAAAACCGCGTTTAGCGCGATGCGCGTGATTGTGACCGTGGGCTGGGCGGTGTATCCG RYIDWLITVPLLMLEFYFVLAAVRKVPSSVFWKLLLGTLVMLIGGYAGEAGYMSAMVGFIIGMAGWIYILYEVFSGEAGSLAAKSGNKSLKTAFSAMRVIVTVGWAVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTATATTGATTGG------------------------CTGATTACCGTGCCGCTGCTGATGCTGGAATTTTATTTTGTGCTGGCGGCG---------GTG---CGCAAAGTGCCGAGC---AGCGTG------------------------------------TTTTGGAAA---CTGCTGCTGGGCACCCTGGTGATGCTGATTGGCGGCTATGCGGGCGAA---------GCG------------------GGC------TAT---------------------------------ATG------------------------------------------------------------------AGCGCG------------------ATGGTGGGC---TTTATTATTGGCATGGCGGGCTGGATTTATATTCTGTATGAAGTG---------------TTT------AGC---GGCGAAGCGGGCAGCCTGGCGGCGAAA------AGC---GGCAACAAAAGCCTG---AAA---ACC---GCG---TTT---AGC---GCGATG---CGCGTGATTGTGACCGTG---------------------------------------------------------------GGCTGG---------GCGGTGTATCCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLAA---V-RKVPS-SV------------FWK-LLLGTLVMLIGGYAGE---A------G--Y-----------M----------------------SA------MVG-FIIGMAGWIYILYEV-----F--S-GEAGSLAAK--S-GNKSL-K-T-A-F-S-AM-RVIVTV---------------------GW---AVYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU563321 [IV-Alpha8-SAR11/IMCC9063] L658_SurfaceI_env_samples_EU563321 gi|171770652|gb|EU563321| Uncultured microorganism clone L658 SurfaceI putative proteorhodopsin gene, partial cds Uncultured microorganism clone L658 SurfaceI putative proteorhodopsin gene, partial cds EU563321 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 Aug2002 Lake_L658_at_3m_depth other freshwater 49.13 -93.13 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na CTGAGCTATGTGGATTGGCTGATTACCGTGCCGCTGCTGATGCTGGAATTTTATTTTGTGCTGGCGGCGGTGCGCAAAGTGCCGAGCAGCGTGTTTTGGAAACTGCTGCTGGGCACCCTGGTGATGCTGATTGGCGGCTATGCGGGCGAAGCGGGCTATATGAGCGCGATGGTGGGCTTTATTATTGGCATGGCGGGCTGGATTTATATTCTGTATGAAGTGTTTAGCGGCGAAGCGGGCAGCCTGGCGGCGAAAAGCGGCAACAAAAGCCTGAAAACCGCGTTTAGCGCGATGCGCGTGATTGTGACCGTGGGCTGGGCGGTGTATCCG LSYVDWLITVPLLMLEFYFVLAAVRKVPSSVFWKLLLGTLVMLIGGYAGEAGYMSAMVGFIIGMAGWIYILYEVFSGEAGSLAAKSGNKSLKTAFSAMRVIVTVGWAVYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGAGCTATGTGGATTGG------------------------CTGATTACCGTGCCGCTGCTGATGCTGGAATTTTATTTTGTGCTGGCGGCG---------GTG---CGCAAAGTGCCGAGC---AGCGTG------------------------------------TTTTGGAAA---CTGCTGCTGGGCACCCTGGTGATGCTGATTGGCGGCTATGCGGGCGAA---------GCG------------------GGC------TAT---------------------------------ATG------------------------------------------------------------------AGCGCG------------------ATGGTGGGC---TTTATTATTGGCATGGCGGGCTGGATTTATATTCTGTATGAAGTG---------------TTT------AGC---GGCGAAGCGGGCAGCCTGGCGGCGAAA------AGC---GGCAACAAAAGCCTG---AAA---ACC---GCG---TTT---AGC---GCGATG---CGCGTGATTGTGACCGTG---------------------------------------------------------------GGCTGG---------GCGGTGTATCCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSYVDW--------LITVPLLMLEFYFVLAA---V-RKVPS-SV------------FWK-LLLGTLVMLIGGYAGE---A------G--Y-----------M----------------------SA------MVG-FIIGMAGWIYILYEV-----F--S-GEAGSLAAK--S-GNKSL-K-T-A-F-S-AM-RVIVTV---------------------GW---AVYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU563322 [IV-Alpha8-SAR11/IMCC9063] L658_3mA_env_samples_EU563322 gi|171770654|gb|EU563322| Uncultured microorganism clone L658 3mA putative proteorhodopsin gene, partial cds Uncultured microorganism clone L658 3mA putative proteorhodopsin gene, partial cds EU563322 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 Aug2002 Lake_L658_at_3m_depth other freshwater 49.13 -93.13 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na CGCGATATTGATTGGCTGATTACCGTGCCGCTGCTGATGCTGGAATTTTATTTTGTGCTGGCGGCGGTGCGCAAAGTGCCGAGCAGCGTGTTTTGGAAACTGCTGCTGGGCACCCTGGTGATGCTGATTGGCGGCTATGCGGGCGAAGCGGGCTATATGAGCGCGATGGTGGGCTTTATTATTGGCATGGCGGGCTGGATTTATATTCTGTATGAAGTGTTTAGCGGCGAAGCGGGCAGCCTGGCGGCGAAAAGCGGCAACAAAAGCCTGAAAACCGCGTTTAGCGCGATGCGCGTGATTGTGACCGTGGGCTGGGCGGTGTATCCG RDIDWLITVPLLMLEFYFVLAAVRKVPSSVFWKLLLGTLVMLIGGYAGEAGYMSAMVGFIIGMAGWIYILYEVFSGEAGSLAAKSGNKSLKTAFSAMRVIVTVGWAVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCGATATTGATTGG------------------------CTGATTACCGTGCCGCTGCTGATGCTGGAATTTTATTTTGTGCTGGCGGCG---------GTG---CGCAAAGTGCCGAGC---AGCGTG------------------------------------TTTTGGAAA---CTGCTGCTGGGCACCCTGGTGATGCTGATTGGCGGCTATGCGGGCGAA---------GCG------------------GGC------TAT---------------------------------ATG------------------------------------------------------------------AGCGCG------------------ATGGTGGGC---TTTATTATTGGCATGGCGGGCTGGATTTATATTCTGTATGAAGTG---------------TTT------AGC---GGCGAAGCGGGCAGCCTGGCGGCGAAA------AGC---GGCAACAAAAGCCTG---AAA---ACC---GCG---TTT---AGC---GCGATG---CGCGTGATTGTGACCGTG---------------------------------------------------------------GGCTGG---------GCGGTGTATCCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RDIDW--------LITVPLLMLEFYFVLAA---V-RKVPS-SV------------FWK-LLLGTLVMLIGGYAGE---A------G--Y-----------M----------------------SA------MVG-FIIGMAGWIYILYEV-----F--S-GEAGSLAAK--S-GNKSL-K-T-A-F-S-AM-RVIVTV---------------------GW---AVYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU563330 [IV-Alpha8-SAR11/IMCC9063] G_see_5C_env_samples_EU563330 gi|171770670|gb|EU563330| Uncultured microorganism clone G see 5C putative proteorhodopsin gene, partial cds Uncultured microorganism clone G see 5C putative proteorhodopsin gene, partial cds EU563330 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 01-juil-06 Grosser_Ploner_See_at_1m_depth other freshwater 54.15 10.42 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na TGCGCGCAGTTTTTTCGCTATATTGATTGGCTGCTGACCGTGCCGCTGCTGATGGTGGAATTTTATTTTATTCTGAGCGCGGTGAAAAAAGTGAGCACCGGCATTTTTTGGCGCCTGCTGCTGGGCACCCTGGTGATGCTGATTGGCGGCTATCTGGGCGAAGCGGGCTATATGAACATTAACGCGGGCTTTATTATTGGCATGGCGGGCTGGATTTTTATTCTGTATGAAGTGTTTAGCGGCGAAGCGGGCCGCGAAGCGGCGCGCCTGAGCGGCCCGGCGAAAGAATGCTTTGAATTTTGCAAATGGATTGTGACCATTGGCTGGGCGGTGTATCCGAGCCTGCGCGCG CAQFFRYIDWLLTVPLLMVEFYFILSAVKKVSTGIFWRLLLGTLVMLIGGYLGEAGYMNINAGFIIGMAGWIFILYEVFSGEAGREAARLSGPAKECFEFCKWIVTIGWAVYPSLRA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCGCGCAGTTTTTTCGCTATATTGATTGG------------------------CTGCTGACCGTGCCGCTGCTGATGGTGGAATTTTATTTTATTCTGAGCGCG---------GTG---AAAAAAGTGAGCACC---GGCATT------------------------------------TTTTGGCGC---CTGCTGCTGGGCACCCTGGTGATGCTGATTGGCGGCTATCTGGGCGAA---------GCG------------------GGC------TAT---------------------------------ATG------------------------------------------------------------------AACATT------------------AACGCGGGC---TTTATTATTGGCATGGCGGGCTGGATTTTTATTCTGTATGAAGTG---------------TTT------AGC---GGCGAAGCGGGCCGC---GAAGCGGCG------CGC---CTGAGCGGCCCGGCG---AAA---GAA---TGC---TTT---GAA---TTTTGC---AAATGGATTGTGACCATT---------------------------------------------------------------GGCTGG---------GCGGTGTATCCGAGCCTGCGCGCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAQFFRYIDW--------LLTVPLLMVEFYFILSA---V-KKVST-GI------------FWR-LLLGTLVMLIGGYLGE---A------G--Y-----------M----------------------NI------NAG-FIIGMAGWIFILYEV-----F--S-GEAGR-EAA--R-LSGPA-K-E-C-F-E-FC-KWIVTI---------------------GW---AVYPSLRA---------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_HQ663835 [IV-Alpha8-SAR11/IMCC9063] SCGC_AAA280B11_Alphaproteobacteria_HQ663835 gi|325163266|gb|HQ663835| Alpha proteobacterium SCGC AAA280B11 rhodopsin gene, partial cds Alpha proteobacterium SCGC AAA280B11 rhodopsin gene, partial cds HQ663835 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Alphaproteobacteria] taxon:938663 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATATTGATTGGCTATTAACAGTTCCATTATTAATGGTTGAGTTCTATTTTATACTTTCAGCTGTTAAAAAAGTATCCTCAGGAATATTCTGGAGACTGTTACTTGGAACATTAGTAATGTTAATAGGTGGATATGCTGGTGAAGCCGGATATATCGGTGTGAACGCAGGATTTATAATTGGTATGGGTGGATGGATTTTCATTCTATACGAAATATTTTCTGGTGAAGCTGGAAAAGAAGCTGCGAGATTATCGGGTGCCGCAAAAGATTGTTTTGTATTCTGTAAATGGATCGTGACAATTGGATGGGCCATTTACCCGGTCATAGCTGTTTCC YIDWLLTVPLLMVEFYFILSAVKKVSSGIFWRLLLGTLVMLIGGYAGEAGYIGVNAGFIIGMGGWIFILYEIFSGEAGKEAARLSGAAKDCFVFCKWIVTIGWAIYPVIAVS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATTGATTGG------------------------CTATTAACAGTTCCATTATTAATGGTTGAGTTCTATTTTATACTTTCAGCT---------GTT---AAAAAAGTATCCTCA---GGAATA------------------------------------TTCTGGAGA---CTGTTACTTGGAACATTAGTAATGTTAATAGGTGGATATGCTGGTGAA---------GCC------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------GGTGTG------------------AACGCAGGA---TTTATAATTGGTATGGGTGGATGGATTTTCATTCTATACGAAATA---------------TTT------TCT---GGTGAAGCTGGAAAA---GAAGCTGCG------AGA---TTATCGGGTGCCGCA---AAA---GAT---TGT---TTT---GTA---TTCTGT---AAATGGATCGTGACAATT---------------------------------------------------------------GGATGG---------GCCATTTACCCGGTCATAGCTGTTTCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YIDW--------LLTVPLLMVEFYFILSA---V-KKVSS-GI------------FWR-LLLGTLVMLIGGYAGE---A------G--Y-----------I----------------------GV------NAG-FIIGMGGWIFILYEI-----F--S-GEAGK-EAA--R-LSGAA-K-D-C-F-V-FC-KWIVTI---------------------GW---AIYPVIAVS--------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU563271 [IV-Alpha8-SAR11/IMCC9063] KIN32_env_samples_EU563271 gi|171770552|gb|EU563271| Uncultured microorganism clone KIN32 putative proteorhodopsin gene, partial cds Uncultured microorganism clone KIN32 putative proteorhodopsin gene, partial cds EU563271 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 2003 Lake_Kinneret other freshwater 32.08 35.07 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na AGCTACATAGATTGGCTATTAACAGTTCCAATTCTGATGGTTGAATTTTATTTCATCTTATCAGCAGTCAAGAAAGTTTCAGGAGGAATATTCTGGAGACTTCTTGTAGGTACTTTAGTTATGCTCATAGGTGGATATCTTGGCGAAGCCGGATATATAAACATCAATGCAGGTTTCATTATTGGAATGGCCGGATGGATATTCATATTATATGAAGTATTCGCTGGTGAAGCCGGTAAAGAAGCTGCAAGATTATCTGGTGCGGCAAAAAATTGTTTTGAATTCTGCAAATGGATTGTAACAATCGGGTGGGCCATTTATCCA SYIDWLLTVPILMVEFYFILSAVKKVSGGIFWRLLVGTLVMLIGGYLGEAGYININAGFIIGMAGWIFILYEVFAGEAGKEAARLSGAAKNCFEFCKWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATAGATTGG------------------------CTATTAACAGTTCCAATTCTGATGGTTGAATTTTATTTCATCTTATCAGCA---------GTC---AAGAAAGTTTCAGGA---GGAATA------------------------------------TTCTGGAGA---CTTCTTGTAGGTACTTTAGTTATGCTCATAGGTGGATATCTTGGCGAA---------GCC------------------GGA------TAT---------------------------------ATA------------------------------------------------------------------AACATC------------------AATGCAGGT---TTCATTATTGGAATGGCCGGATGGATATTCATATTATATGAAGTA---------------TTC------GCT---GGTGAAGCCGGTAAA---GAAGCTGCA------AGA---TTATCTGGTGCGGCA---AAA---AAT---TGT---TTT---GAA---TTCTGC---AAATGGATTGTAACAATC---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LLTVPILMVEFYFILSA---V-KKVSG-GI------------FWR-LLVGTLVMLIGGYLGE---A------G--Y-----------I----------------------NI------NAG-FIIGMAGWIFILYEV-----F--A-GEAGK-EAA--R-LSGAA-K-N-C-F-E-FC-KWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_NC_015380 [IV-Alpha8-SAR11/IMCC9063] 330812975_793621_794319_Candidatus_Pelagibacter_sp_IMCC9063_genome gi|330812975|gb|NC_015380| Candidatus Pelagibacter sp IMCC9063 chromosome, complete genome Candidatus Pelagibacter sp IMCC9063 chromosome, complete genome NC_015380 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Alphaproteobacteria/SAR11 cluster/Candidatus Pelagibacter] taxon:1002672 genomic_DNA strain 06-juil-13 #na #na #na #na 79.001944 11.309167 #na #na #na #na #na ATGAAAACTGCTATGTTAGCATCAAATGATTTCGTTGGAATTTCGTTCTGGCTGATTTCTATGGCTATGTTAGCTTCAACTGTTTTTTTCTTCATTGAGAGAAATTCAGTTAAAGCATCTTGGAGAACCTCAATCACTATATCTGGTCTTGTAACTGGTATTGCATTTGTGCACTACATGTACATGAGAGAAGTGTGGGTTTCTACAGGAACTTCACCAACTGTATATAGATATATCGACTGGTTATTGACAGTTCCGTTATTAATGATTGAATTTTATTTCATCTTGTCGGCTGTTAAAAAAGTATCATCAGGTATTTTCTGGAGACTACTAGTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGCTACATAAATATCACTGCTGGTTTTGTAATAGGAATGGCAGGATGGATCTACATTCTATATGAAATATTTTCAGGAGAAGCAGCAAAAGAAGCTGCAAAATTAAAAGGTCCAGTAAATGGCTGTTTTAATTTTTGTAAATGGGTTGTAACTTTAGGTTGGTCAATTTATCCATTAGGTTACCTATTTGGATATATGATTGGCGGAACTGATGAAGCGTCTCTTAATATCATCTACAACTTAGCTGACTTACTAAACAAAACTATCTTCGGATTGGTTATTTATCAAACAGCAAAAAATCTTACGCCAGCTGGTAAA MKTAMLASNDFVGISFWLISMAMLASTVFFFIERNSVKASWRTSITISGLVTGIAFVHYMYMREVWVSTGTSPTVYRYIDWLLTVPLLMIEFYFILSAVKKVSSGIFWRLLVGSLVMLIGGYLGEAGYINITAGFVIGMAGWIYILYEIFSGEAAKEAAKLKGPVNGCFNFCKWVVTLGWSIYPLGYLFGYMIGGTDEASLNIIYNLADLLNKTIFGLVIYQTAKNLTPAGK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAACTGCTATGTTAGCATCAAATGATTTCGTTGGAATTTCGTTCTGGCTGATTTCTATGGCTATGTTAGCTTCAACTGTTTTTTTCTTCATTGAGAGAAATTCAGTTAAAGCA---TCTTGGAGAACCTCAATCACTATATCTGGTCTTGTAACTGGTATTGCATTTGTGCACTACATGTACATGAGAGAAGTGTGGGTT---------------------------------------------------TCTACAGGAACTTCACCAACTGTATATAGATATATCGACTGG------------------------TTATTGACAGTTCCGTTATTAATGATTGAATTTTATTTCATCTTGTCGGCT---------GTT---AAAAAAGTATCATCA---GGTATT------------------------------------TTCTGGAGA---CTACTAGTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGC------TAC---------------------------------ATA------------------------------------------------------------------AATATC------------------ACTGCTGGT---TTTGTAATAGGAATGGCAGGATGGATCTACATTCTATATGAAATA---------------TTT------TCA---GGAGAAGCAGCAAAA---GAAGCTGCA------AAA---TTAAAAGGTCCAGTA---AAT---GGC---TGT---TTT---AAT---TTTTGT---AAATGGGTTGTAACTTTA---------------------------------------------------------------GGTTGG---------TCAATTTATCCATTAGGTTACCTATTTGGATATATG---------------------------------------ATTGGCGGAACTGATGAAGCGTCTCTTAATATCATCTACAACTTAGCTGACTTACTAAACAAAACTATCTTCGGATTGGTTATTTATCAAACAGCAAAAAATCTTACGCCAGCTGGTAAA--------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------MKTAMLASNDFVGISFWLISMAMLASTVFFFIERNSVKA-SWRTSITISGLVTGIAFVHYMYMREVWV-----------------STGTSPTVYRYIDW--------LLTVPLLMIEFYFILSA---V-KKVSS-GI------------FWR-LLVGSLVMLIGGYLGE---A------G--Y-----------I----------------------NI------TAG-FVIGMAGWIYILYEI-----F--S-GEAAK-EAA--K-LKGPV-N-G-C-F-N-FC-KWVVTL---------------------GW---SIYPLGYLFGYM-------------IGGTDEASLNIIYNLADLLNKTIFGLVIYQTAKNLTPAGK------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926098 [IV-Alpha8-SAR11/IMCC9063] BOUM_OTU011_env_samples gb|KJ926098| Uncultured bacterium clone BOUM OTU011 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU011 putative proteorhodopsin gene, partial cds KJ926098 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 38.6308 7.9097 #na #na #na #na #na ATCGACTGGCTAATTACTGTGCCACTACAGATCGTAGAATTTTATTTAATTCTTACTGCTGTTAGAAAAGTTCCTAGCTCAATGTTTTGGAGACTATTAATAGCATCTCTAATTATGTTAGTGTTCGGTTATATGGGTGAAGCAGGATATATCTCAGCATTATTTGGTTGGATTGTTGGAACAGCAGCGTGGATTTATATTATATATGAATTATTTTCAGGTGCAGCTGGTAAAGCAATGAAATCAAGTGGAAATAAACCACTAAAGACTGCATTCACAGCTATGAGAATGATTGTAACAGTGGGCTGGGCTATTTAT IDWLITVPLQIVEFYLILTAVRKVPSSMFWRLLIASLIMLVFGYMGEAGYISALFGWIVGTAAWIYIIYELFSGAAGKAMKSSGNKPLKTAFTAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCGACTGG------------------------CTAATTACTGTGCCACTACAGATCGTAGAATTTTATTTAATTCTTACTGCT---------GTT---AGAAAAGTTCCTAGC---TCAATG------------------------------------TTTTGGAGA---CTATTAATAGCATCTCTAATTATGTTAGTGTTCGGTTATATGGGTGAA---------GCA------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------TCAGCA------------------TTATTTGGT---TGGATTGTTGGAACAGCAGCGTGGATTTATATTATATATGAATTA---------------TTT------TCA---GGTGCAGCTGGTAAAGCAATGAAATCA------AGT---GGAAATAAACCACTA---AAG---ACT---GCA---TTC---ACA---GCTATG---AGAATGATTGTAACAGTG---------------------------------------------------------------GGCTGG---------GCTATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDW--------LITVPLQIVEFYLILTA---V-RKVPS-SM------------FWR-LLIASLIMLVFGYMGE---A------G--Y-----------I----------------------SA------LFG-WIVGTAAWIYIIYEL-----F--S-GAAGKAMKS--S-GNKPL-K-T-A-F-T-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_JX863301 [IV-Alpha8-SAR11/IMCC9063] MALINA_OTU39_115_Q_env_samples_JX863301 gi|425477552|gb|JX863301| Uncultured bacterium clone MALINA OTU39 115 Q putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU39 115 Q putative proteorhodopsin mRNA, partial cds JX863301 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 09Aug2009 3m_depth Arctic Ocean marine 71.57 -133.94 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATTACTGTTCCATTACAAATAATAGAATTTTATTTAATTCTTACTGCTGTTAGAAAAGTTCCTAGCTCAATGTTTTGGAGACTTTTAATAGCATCTTTAGTTATGTTAGTGTTTGGTTATCTTGGTGAAGCAGGATATATCTCAGCACTATTTGGCTGGATTGTAGGAACAGCGGCTTGGATTTATATTATATATGAATTATTTTCAGGTGAAGCTGGTAAAGCAATGAAGTCAAGTGGTAACAAACCACTTAAGACTGCATTTACTGCAATGAGAATGATTGTAACAGTT WLITVPLQIIEFYLILTAVRKVPSSMFWRLLIASLVMLVFGYLGEAGYISALFGWIVGTAAWIYIIYELFSGEAGKAMKSSGNKPLKTAFTAMRMIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATTACTGTTCCATTACAAATAATAGAATTTTATTTAATTCTTACTGCT---------GTT---AGAAAAGTTCCTAGC---TCAATG------------------------------------TTTTGGAGA---CTTTTAATAGCATCTTTAGTTATGTTAGTGTTTGGTTATCTTGGTGAA---------GCA------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------TCAGCA------------------CTATTTGGC---TGGATTGTAGGAACAGCGGCTTGGATTTATATTATATATGAATTA---------------TTT------TCA---GGTGAAGCTGGTAAAGCAATGAAGTCA------AGT---GGTAACAAACCACTT---AAG---ACT---GCA---TTT---ACT---GCAATG---AGAATGATTGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLQIIEFYLILTA---V-RKVPS-SM------------FWR-LLIASLVMLVFGYLGE---A------G--Y-----------I----------------------SA------LFG-WIVGTAAWIYIIYEL-----F--S-GEAGKAMKS--S-GNKPL-K-T-A-F-T-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926101 [IV-Alpha8-SAR11/IMCC9063] BOUM_OTU014_env_samples gb|KJ926101| Uncultured bacterium clone BOUM OTU014 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU014 putative proteorhodopsin gene, partial cds KJ926101 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 33.709667 32.644667 #na #na #na #na #na ATTGACTGGTTAATTACTGTACCATTACAAATAGTAGAATTTTATTTAATTCTTTCTGCTGTAAGAAAAGTTCCAACATCAATGTTTTGGAGATTATTAGTAGCGTCTCTAATTATGTTGATATTCGGCTATATGGGTGAAGCAGGATATATTTCTGCACTAGCTGGTTGGGTAATTGGATCAGCAGCGTGGATTTATATTATATACGAATTATTCTCAGGTGCAGCTGGAAAAGCTATGAAGTCTAGTGGTAACAAACCACTTAAGACTGCATTTAATGCAATGAGATGGATTGTAACAGTTGGCTGGGCAATTTAC IDWLITVPLQIVEFYLILSAVRKVPTSMFWRLLVASLIMLIFGYMGEAGYISALAGWVIGSAAWIYIIYELFSGAAGKAMKSSGNKPLKTAFNAMRWIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGACTGG------------------------TTAATTACTGTACCATTACAAATAGTAGAATTTTATTTAATTCTTTCTGCT---------GTA---AGAAAAGTTCCAACA---TCAATG------------------------------------TTTTGGAGA---TTATTAGTAGCGTCTCTAATTATGTTGATATTCGGCTATATGGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------TCTGCA------------------CTAGCTGGT---TGGGTAATTGGATCAGCAGCGTGGATTTATATTATATACGAATTA---------------TTC------TCA---GGTGCAGCTGGAAAAGCTATGAAGTCT------AGT---GGTAACAAACCACTT---AAG---ACT---GCA---TTT---AAT---GCAATG---AGATGGATTGTAACAGTT---------------------------------------------------------------GGCTGG---------GCAATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDW--------LITVPLQIVEFYLILSA---V-RKVPT-SM------------FWR-LLVASLIMLIFGYMGE---A------G--Y-----------I----------------------SA------LAG-WVIGSAAWIYIIYEL-----F--S-GAAGKAMKS--S-GNKPL-K-T-A-F-N-AM-RWIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926099 [IV-Alpha8-SAR11/IMCC9063] BOUM_OTU012_env_samples gb|KJ926099| Uncultured bacterium clone BOUM OTU012 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU012 putative proteorhodopsin gene, partial cds KJ926099 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 33.709667 32.644667 #na #na #na #na #na GTAGACTGGTTAATAACTGTGCCTCTTCAAATAGTAGAATTTTATTTAATACTTTCTGCTGTTAGAAAAGTTCCAACTTCAATGTTTTGGAGATTGTTAGTTGCATCTTTAATTATGTTAATATTCGGATATTTAGGTGAAGCCGGATATATATCAGCATTATTAGGATGGATAATTGGAACAGCTGCATGGGTTTATATTTTATTTGAATTATTTTCAGGTGAAGCTGGTAAAGCAATGAAATCTAGTGGAGACAAACCACTTAAAACTGCATTTACCGCAATGAGAATGATTGTAACAGTTGGGTGGGCAATCTAC VDWLITVPLQIVEFYLILSAVRKVPTSMFWRLLVASLIMLIFGYLGEAGYISALLGWIIGTAAWVYILFELFSGEAGKAMKSSGDKPLKTAFTAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGACTGG------------------------TTAATAACTGTGCCTCTTCAAATAGTAGAATTTTATTTAATACTTTCTGCT---------GTT---AGAAAAGTTCCAACT---TCAATG------------------------------------TTTTGGAGA---TTGTTAGTTGCATCTTTAATTATGTTAATATTCGGATATTTAGGTGAA---------GCC------------------GGA------TAT---------------------------------ATA------------------------------------------------------------------TCAGCA------------------TTATTAGGA---TGGATAATTGGAACAGCTGCATGGGTTTATATTTTATTTGAATTA---------------TTT------TCA---GGTGAAGCTGGTAAAGCAATGAAATCT------AGT---GGAGACAAACCACTT---AAA---ACT---GCA---TTT---ACC---GCAATG---AGAATGATTGTAACAGTT---------------------------------------------------------------GGGTGG---------GCAATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPLQIVEFYLILSA---V-RKVPT-SM------------FWR-LLVASLIMLIFGYLGE---A------G--Y-----------I----------------------SA------LLG-WIIGTAAWVYILFEL-----F--S-GEAGKAMKS--S-GDKPL-K-T-A-F-T-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926100 [IV-Alpha8-SAR11/IMCC9063] BOUM_OTU013_env_samples gb|KJ926100| Uncultured bacterium clone BOUM OTU013 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU013 putative proteorhodopsin gene, partial cds KJ926100 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 33.709667 32.644667 #na #na #na #na #na ATCGATTGGTTAATTACTGTACCTCTTCAAATAGTAGAATTTTATTTAATTCTTGCTGCTGTTAGAAAAGTTCCAGTATCAATGTTTTGGAGATTGCTAGTAGCATCTTTAGTTATGTTGGTATTCGGATACCTTGGTGAAGCTGGATACATTTCAGCTCTTTTAGGTTTTGTAGTTGGAACAGCTGCATGGATATATATTTTATTTGAATTGTTCTCAGGAGAAGCTGGAAAAGCTATGAAGTCTAGTGGTAATAAAGCACTTAAAACTGCCTTTACTGCAATGAGAATGATTGTAACAATAGGCTGGGCGATTTAT IDWLITVPLQIVEFYLILAAVRKVPVSMFWRLLVASLVMLVFGYLGEAGYISALLGFVVGTAAWIYILFELFSGEAGKAMKSSGNKALKTAFTAMRMIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCGATTGG------------------------TTAATTACTGTACCTCTTCAAATAGTAGAATTTTATTTAATTCTTGCTGCT---------GTT---AGAAAAGTTCCAGTA---TCAATG------------------------------------TTTTGGAGA---TTGCTAGTAGCATCTTTAGTTATGTTGGTATTCGGATACCTTGGTGAA---------GCT------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------TCAGCT------------------CTTTTAGGT---TTTGTAGTTGGAACAGCTGCATGGATATATATTTTATTTGAATTG---------------TTC------TCA---GGAGAAGCTGGAAAAGCTATGAAGTCT------AGT---GGTAATAAAGCACTT---AAA---ACT---GCC---TTT---ACT---GCAATG---AGAATGATTGTAACAATA---------------------------------------------------------------GGCTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDW--------LITVPLQIVEFYLILAA---V-RKVPV-SM------------FWR-LLVASLVMLVFGYLGE---A------G--Y-----------I----------------------SA------LLG-FVVGTAAWIYILFEL-----F--S-GEAGKAMKS--S-GNKAL-K-T-A-F-T-AM-RMIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422719 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-20m-h2_DQ422719 gi|90024958|gb|DQ422719| Uncultured bacterium clone med-tb04-20m-h2 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-h2 putative proteorhodopsin gene, partial cds. DQ422719 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGCTACATAGACTGGCTAATCACTGTACCTCTTCAAATAGTAGAATTTTATTTAATACTTTCTGCTGTTAGAAAAGTACCTTCATCAATGTTTTGGAGATTGTTAGTAGCTTCTCTAGTTATGTTGATCTTTGGTTACTTAGGTGAAGCTGGATACATCTCAGCGCTTATTGGCTGGCTTGTTGGAACAGCTGCATGGATTTACATTATATTTGAATTATTTTCAGGACAAGCTGGTAAAGCAATGAGATCGAGTGGTAATAAACCTCTTAAAACTGCCTTTACTGCAATGAGAATGATTGTAACAGTTGGTTGGGCTATTTATCCA SYIDWLITVPLQIVEFYLILSAVRKVPSSMFWRLLVASLVMLIFGYLGEAGYISALIGWLVGTAAWIYIIFELFSGQAGKAMRSSGNKPLKTAFTAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATAGACTGG------------------------CTAATCACTGTACCTCTTCAAATAGTAGAATTTTATTTAATACTTTCTGCT---------GTT---AGAAAAGTACCTTCA---TCAATG------------------------------------TTTTGGAGA---TTGTTAGTAGCTTCTCTAGTTATGTTGATCTTTGGTTACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------TCAGCG------------------CTTATTGGC---TGGCTTGTTGGAACAGCTGCATGGATTTACATTATATTTGAATTA---------------TTT------TCA---GGACAAGCTGGTAAAGCAATGAGATCG------AGT---GGTAATAAACCTCTT---AAA---ACT---GCC---TTT---ACT---GCAATG---AGAATGATTGTAACAGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIVEFYLILSA---V-RKVPS-SM------------FWR-LLVASLVMLIFGYLGE---A------G--Y-----------I----------------------SA------LIG-WLVGTAAWIYIIFEL-----F--S-GQAGKAMRS--S-GNKPL-K-T-A-F-T-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926092 [IV-Alpha8-SAR11/IMCC9063] BOUM_OTU005_env_samples gb|KJ926092| Uncultured bacterium clone BOUM OTU005 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU005 putative proteorhodopsin gene, partial cds KJ926092 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 33.709667 32.644667 #na #na #na #na #na ATTGACTGGTTAATTACTGTACCATTACAAATGGTAGAGTTTTATTTAATCCTATCTGCAGTAAGAAAAGTTTCAGGAGGAATGTTCTGGAGACTTTTAATCGGATCACTTGTAATGTTAATCGGAGGATATTTAGGTGAAGCAGGTTACATCAACGCTACGCTTGGTTTTGTAATAGGTATGGGTGGATGGATTTACGTTTTATATGAAATCTTCTCAGGTGAAGCTGGTAAAGCAGCTGCTAAGAGTGGAAACAGAGCTCTTACAACTGCATTCAGCGCATTAAGAATGATCGTTACTGTTGGGTGGGCAATATAC IDWLITVPLQMVEFYLILSAVRKVSGGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMGGWIYVLYEIFSGEAGKAAAKSGNRALTTAFSALRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGACTGG------------------------TTAATTACTGTACCATTACAAATGGTAGAGTTTTATTTAATCCTATCTGCA---------GTA---AGAAAAGTTTCAGGA---GGAATG------------------------------------TTCTGGAGA---CTTTTAATCGGATCACTTGTAATGTTAATCGGAGGATATTTAGGTGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACGCTTGGT---TTTGTAATAGGTATGGGTGGATGGATTTACGTTTTATATGAAATC---------------TTC------TCA---GGTGAAGCTGGTAAAGCAGCTGCTAAG------AGT---GGAAACAGAGCTCTT---ACA---ACT---GCA---TTC---AGC---GCATTA---AGAATGATCGTTACTGTT---------------------------------------------------------------GGGTGG---------GCAATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDW--------LITVPLQMVEFYLILSA---V-RKVSG-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMGGWIYVLYEI-----F--S-GEAGKAAAK--S-GNRAL-T-T-A-F-S-AL-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926096 [IV-Alpha8-SAR11/IMCC9063] BOUM_OTU009_env_samples gb|KJ926096| Uncultured bacterium clone BOUM OTU009 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU009 putative proteorhodopsin gene, partial cds KJ926096 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 33.709667 32.644667 #na #na #na #na #na GTCGATTGGTTAATTACTGTACCATTACAGATGATAGAATTTTATTTAATATTGTTGGCAGTAAGAAAAGTTTCTAGTGGTATATTTTGGAGGCTTTTAATTGGGTCGCTTATAATGATAATTGGAGGGTATTTAGGAGAAGCAGAATACATAAGCAGAATGCTTGGCTTTGTTATTGGTATGGCTGGATGGATTTATATTTTATATGAAATTTTTTCAGGAGAAGCTGGAAGATCAGCGGCCAAAAGTGGAAGTAAGCCTTTTGTAACAGCTTTTAGCGCGCTAAGAATGATAGTTACTGTTGGCTGGGCAATATAT VDWLITVPLQMIEFYLILLAVRKVSSGIFWRLLIGSLIMIIGGYLGEAEYISRMLGFVIGMAGWIYILYEIFSGEAGRSAAKSGSKPFVTAFSALRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCGATTGG------------------------TTAATTACTGTACCATTACAGATGATAGAATTTTATTTAATATTGTTGGCA---------GTA---AGAAAAGTTTCTAGT---GGTATA------------------------------------TTTTGGAGG---CTTTTAATTGGGTCGCTTATAATGATAATTGGAGGGTATTTAGGAGAA---------GCA------------------GAA------TAC---------------------------------ATA------------------------------------------------------------------AGCAGA------------------ATGCTTGGC---TTTGTTATTGGTATGGCTGGATGGATTTATATTTTATATGAAATT---------------TTT------TCA---GGAGAAGCTGGAAGATCAGCGGCCAAA------AGT---GGAAGTAAGCCTTTT---GTA---ACA---GCT---TTT---AGC---GCGCTA---AGAATGATAGTTACTGTT---------------------------------------------------------------GGCTGG---------GCAATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPLQMIEFYLILLA---V-RKVSS-GI------------FWR-LLIGSLIMIIGGYLGE---A------E--Y-----------I----------------------SR------MLG-FVIGMAGWIYILYEI-----F--S-GEAGRSAAK--S-GSKPF-V-T-A-F-S-AL-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU915849 [IV-Alpha8-SAR11/IMCC9063] APF1106_env_samples_EU915849 gi|229358580|gb|EU915849| Uncultured microorganism clone APF1106 putative proteorhodopsin gene, partial cds Uncultured microorganism clone APF1106 putative proteorhodopsin gene, partial cds EU915849 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample_at_200_m_depth Atlantic Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTATTAGCGGCTACTGTATTCTTCTTCATGGAAAGAGGATCAGTTGCGGCTGGCTGGAGAACTTCAGTAACAGTAGCGGGACTTGTAACTGGTATTGCATTCATACACTACATGTATATGAGAGGTGTTTGGGTTCAAACTGGAGATTCACCAACAGTATATAGATATATTGATTGGTTAATCACTGTACCATTACAAATGGTAGAGTTTTATTTAATTCTAGCAGCTGTTAGAAAAGTAGACGGCGGAATATTCTGGAGATTATTAATTGGATCTTTGGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATCAATGAAATGCTTGGTTTCATAATCGGTATAGCAGGATGGATCTACATCTTATATGAAATATTCTCAGGCGAAGCTGGTAAAGCGGCAGCTAAAAGTGGCAACAAAGGTCTTGCTACTGCGTTTAGCACAATGAGAATGATCGTAACAGTTGGGTGGGCGATCTAC LLAATVFFFMERGSVAAGWRTSVTVAGLVTGIAFIHYMYMRGVWVQTGDSPTVYRYIDWLITVPLQMVEFYLILAAVRKVDGGIFWRLLIGSLVMLIGGYLGEAGYINEMLGFIIGIAGWIYILYEIFSGEAGKAAAKSGNKGLATAFSTMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTCATGGAAAGAGGATCAGTTGCGGCT---GGCTGGAGAACTTCAGTAACAGTAGCGGGACTTGTAACTGGTATTGCATTCATACACTACATGTATATGAGAGGTGTTTGGGTT------------------------------CAAACT---------------------GGAGATTCACCAACAGTATATAGATATATTGATTGG------------------------TTAATCACTGTACCATTACAAATGGTAGAGTTTTATTTAATTCTAGCAGCT---------GTT---AGAAAAGTAGACGGC---GGAATA------------------------------------TTCTGGAGA---TTATTAATTGGATCTTTGGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGAA------------------ATGCTTGGT---TTCATAATCGGTATAGCAGGATGGATCTACATCTTATATGAAATA---------------TTC------TCA---GGCGAAGCTGGTAAAGCGGCAGCTAAA------AGT---GGCAACAAAGGTCTT---GCT---ACT---GCG---TTT---AGC---ACAATG---AGAATGATCGTAACAGTT---------------------------------------------------------------GGGTGG---------GCGATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFMERGSVAA-GWRTSVTVAGLVTGIAFIHYMYMRGVWV----------QT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---V-RKVDG-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NE------MLG-FIIGIAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKGL-A-T-A-F-S-TM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EF088535 [IV-Alpha8-SAR11/IMCC9063] clone_APF1106_EF088535 gi|126843294|gb|EF088535| Uncultured bacterium clone APF1106 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone APF1106 putative proteorhodopsin gene, partial cds. EF088535 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na 200m water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na CTATTAGCGGCTACTGTATTCTTCTTCATGGAAAGAGGATCAGTTGCGGCTGGCTGGAGAACTTCAGTAACAGTAGCGGGACTTGTAACTGGTATTGCATTCATACACTACATGTATATGAGAGGTGTTTGGGTTCAAACTGGAGATTCACCAACAGTATATAGATATATTGATTGGTTAATCACTGTACCATTACAAATGGTAGAGTTTTATTTAATTCTAGCAGCTGTTAGAAAAGTAGACGGCGGAATATTCTGGAGATTATTAATTGGATCTTTGGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATCAATGAAATGCTTGGTTTCATAATCGGTATAGCAGGATGGATCTACATCTTATATGAAATATTCTCAGGCGAAGCTGGTAAAGCGGCAGCTAAAAGTGGCAACAAAGGTCTTGCTACTGCGTTTAGCACAATGAGAATGATCGTAACAGTTGGGTGGGCGATCTACCCA LLAATVFFFMERGSVAAGWRTSVTVAGLVTGIAFIHYMYMRGVWVQTGDSPTVYRYIDWLITVPLQMVEFYLILAAVRKVDGGIFWRLLIGSLVMLIGGYLGEAGYINEMLGFIIGIAGWIYILYEIFSGEAGKAAAKSGNKGLATAFSTMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTCATGGAAAGAGGATCAGTTGCGGCT---GGCTGGAGAACTTCAGTAACAGTAGCGGGACTTGTAACTGGTATTGCATTCATACACTACATGTATATGAGAGGTGTTTGGGTT------------------------------CAAACT---------------------GGAGATTCACCAACAGTATATAGATATATTGATTGG------------------------TTAATCACTGTACCATTACAAATGGTAGAGTTTTATTTAATTCTAGCAGCT---------GTT---AGAAAAGTAGACGGC---GGAATA------------------------------------TTCTGGAGA---TTATTAATTGGATCTTTGGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGAA------------------ATGCTTGGT---TTCATAATCGGTATAGCAGGATGGATCTACATCTTATATGAAATA---------------TTC------TCA---GGCGAAGCTGGTAAAGCGGCAGCTAAA------AGT---GGCAACAAAGGTCTT---GCT---ACT---GCG---TTT---AGC---ACAATG---AGAATGATCGTAACAGTT---------------------------------------------------------------GGGTGG---------GCGATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFMERGSVAA-GWRTSVTVAGLVTGIAFIHYMYMRGVWV----------QT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---V-RKVDG-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NE------MLG-FIIGIAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKGL-A-T-A-F-S-TM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU915725 [IV-Alpha8-SAR11/IMCC9063] APF9051_env_samples_EU915725 gi|229358332|gb|EU915725| Uncultured microorganism clone APF9051 putative proteorhodopsin gene, partial cds Uncultured microorganism clone APF9051 putative proteorhodopsin gene, partial cds EU915725 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample_at_75_m_depth Atlantic Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTATTAGCGTCTACTGTATTCTTCTTCATGGAAAGAGGATCAGTTGCGGCTGGCTGGAGAACTTCAGTAACAGTAGCGGGACTTGTAACTGGTATTGCATTCATACACTACATGTATATGAGAGGTGTTTGGGTTCAAACTGGAGATTCACCAACAGTATATAGATATATTGATTGGTTAATCACTGTACCATTACAAATGGTAGAGTTTTATTTAATTCTAGCAGCTGTTAGAAAAGTAGACGGCGGAATATTCTGGAGATTATTAATTGGATCTTTGGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATCAATGAAATGCTTGGTTTCATAATCGGTATAGCAGGATGGATCTACATCTTATATGAAATATTCTCAGGCGAAGCTGGTAAAGCGGCAGCTAAAAGTGGCAACAAAGGTCTTGCTACTGCGTTTAGCACAATGAGAATGATCGTAACAGTTGGTTGGGCCATTTAC LLASTVFFFMERGSVAAGWRTSVTVAGLVTGIAFIHYMYMRGVWVQTGDSPTVYRYIDWLITVPLQMVEFYLILAAVRKVDGGIFWRLLIGSLVMLIGGYLGEAGYINEMLGFIIGIAGWIYILYEIFSGEAGKAAAKSGNKGLATAFSTMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGTCTACTGTATTCTTCTTCATGGAAAGAGGATCAGTTGCGGCT---GGCTGGAGAACTTCAGTAACAGTAGCGGGACTTGTAACTGGTATTGCATTCATACACTACATGTATATGAGAGGTGTTTGGGTT------------------------------CAAACT---------------------GGAGATTCACCAACAGTATATAGATATATTGATTGG------------------------TTAATCACTGTACCATTACAAATGGTAGAGTTTTATTTAATTCTAGCAGCT---------GTT---AGAAAAGTAGACGGC---GGAATA------------------------------------TTCTGGAGA---TTATTAATTGGATCTTTGGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGAA------------------ATGCTTGGT---TTCATAATCGGTATAGCAGGATGGATCTACATCTTATATGAAATA---------------TTC------TCA---GGCGAAGCTGGTAAAGCGGCAGCTAAA------AGT---GGCAACAAAGGTCTT---GCT---ACT---GCG---TTT---AGC---ACAATG---AGAATGATCGTAACAGTT---------------------------------------------------------------GGTTGG---------GCCATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------LLASTVFFFMERGSVAA-GWRTSVTVAGLVTGIAFIHYMYMRGVWV----------QT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---V-RKVDG-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NE------MLG-FIIGIAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKGL-A-T-A-F-S-TM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EF088518 [IV-Alpha8-SAR11/IMCC9063] clone_APF9051_EF088518 gi|126843253|gb|EF088518| Uncultured bacterium clone APF9051 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone APF9051 putative proteorhodopsin gene, partial cds. EF088518 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na 75m water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na CTATTAGCGTCTACTGTATTCTTCTTCATGGAAAGAGGATCAGTTGCGGCTGGCTGGAGAACTTCAGTAACAGTAGCGGGACTTGTAACTGGTATTGCATTCATACACTACATGTATATGAGAGGTGTTTGGGTTCAAACTGGAGATTCACCAACAGTATATAGATATATTGATTGGTTAATCACTGTACCATTACAAATGGTAGAGTTTTATTTAATTCTAGCAGCTGTTAGAAAAGTAGACGGCGGAATATTCTGGAGATTATTAATTGGATCTTTGGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATCAATGAAATGCTTGGTTTCATAATCGGTATAGCAGGATGGATCTACATCTTATATGAAATATTCTCAGGCGAAGCTGGTAAAGCGGCAGCTAAAAGTGGCAACAAAGGTCTTGCTACTGCGTTTAGCACAATGAGAATGATCGTAACAGTTGGTTGGGCCATTTACCCA LLASTVFFFMERGSVAAGWRTSVTVAGLVTGIAFIHYMYMRGVWVQTGDSPTVYRYIDWLITVPLQMVEFYLILAAVRKVDGGIFWRLLIGSLVMLIGGYLGEAGYINEMLGFIIGIAGWIYILYEIFSGEAGKAAAKSGNKGLATAFSTMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGTCTACTGTATTCTTCTTCATGGAAAGAGGATCAGTTGCGGCT---GGCTGGAGAACTTCAGTAACAGTAGCGGGACTTGTAACTGGTATTGCATTCATACACTACATGTATATGAGAGGTGTTTGGGTT------------------------------CAAACT---------------------GGAGATTCACCAACAGTATATAGATATATTGATTGG------------------------TTAATCACTGTACCATTACAAATGGTAGAGTTTTATTTAATTCTAGCAGCT---------GTT---AGAAAAGTAGACGGC---GGAATA------------------------------------TTCTGGAGA---TTATTAATTGGATCTTTGGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGAA------------------ATGCTTGGT---TTCATAATCGGTATAGCAGGATGGATCTACATCTTATATGAAATA---------------TTC------TCA---GGCGAAGCTGGTAAAGCGGCAGCTAAA------AGT---GGCAACAAAGGTCTT---GCT---ACT---GCG---TTT---AGC---ACAATG---AGAATGATCGTAACAGTT---------------------------------------------------------------GGTTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------LLASTVFFFMERGSVAA-GWRTSVTVAGLVTGIAFIHYMYMRGVWV----------QT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---V-RKVDG-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NE------MLG-FIIGIAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKGL-A-T-A-F-S-TM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ062261 [IV-Alpha8-SAR11/IMCC9063] MEDPR45_env_samples_DQ062261 gi|67483467|gb|DQ062261| Uncultured bacterium clone MEDPR45 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR45 proteorhodopsin gene, partial cds DQ062261 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na GACTGGCTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCGATTAGAAAAGTACCTTCAGGAATTTTCTGGAGATTACTAATCGGATCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGTTACATCAACGCTACACTTGGTTTCGTTATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCAGGTGAAGCTGGAAAAGCAGCATCAAAAAGTGGTAACAAAGCACTTGTTACAGCTTTCGGTGCAATGAGAATGATCGTAACAATCGGTTGGGCGATTTATCCA DWLITVPLQMIEFYLILAAIRKVPSGIFWRLLIGSVVMLVGGYLGEAGYINATLGFVIGMAGWIYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTIGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTGG------------------------CTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCG---------ATT---AGAAAAGTACCTTCA---GGAATT------------------------------------TTCTGGAGA---TTACTAATCGGATCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCGTTATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCAGCATCAAAA------AGT---GGTAACAAAGCACTT---GTT---ACA---GCT---TTC---GGT---GCAATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGTTGG---------GCGATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DW--------LITVPLQMIEFYLILAA---I-RKVPS-GI------------FWR-LLIGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422365 [IV-Alpha8-SAR11/IMCC9063] clone_med-50m-b1_DQ422365 gi|90024250|gb|DQ422365| Uncultured bacterium clone med-50m-b1 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-b1 putative proteorhodopsin gene, partial cds. DQ422365 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCGATTAGAAAAGTACCTTCAGGAATTTTCTGGAGATTACTAATCGGATCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGTTACATCAACGCTACACTTGGTTTCGTTATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCAGGTGAAGCTGGAAAAGCAGCATCAAAAAGTGGTAACAAAGCACTTGTTACAGCTTTCGGTGCAATGAGAATGATCGTAACAATCGGTTGGGCTATTTATCCA RYIDWLITVPLQMIEFYLILAAIRKVPSGIFWRLLIGSVVMLVGGYLGEAGYINATLGFVIGMAGWIYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCG---------ATT---AGAAAAGTACCTTCA---GGAATT------------------------------------TTCTGGAGA---TTACTAATCGGATCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCGTTATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCAGCATCAAAA------AGT---GGTAACAAAGCACTT---GTT---ACA---GCT---TTC---GGT---GCAATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---I-RKVPS-GI------------FWR-LLIGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ062287 [IV-Alpha8-SAR11/IMCC9063] MEDPR86H08_env_samples_DQ062287 gi|67483519|gb|DQ062287| Uncultured bacterium clone MEDPR86H08 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR86H08 proteorhodopsin gene, partial cds DQ062287 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na AGATACATAGACTGGCTGATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCGATAAGAAAAGTACCTTCAGGAATTTTCTGGAGATTACTGATCGGATCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGTTACATCAACGCTACACTTGGTTTCGTAATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCAGGTGAAGCTGGAAAAGCAGCATCAAAAAGTGGTAACAAAGCACTTGTTACAGCTTTCGGTGCAATGAGAATGATCGTAACAATCGGTTGGGCTATTTACCCA RYIDWLITVPLQMIEFYLILAAIRKVPSGIFWRLLIGSVVMLVGGYLGEAGYINATLGFVIGMAGWIYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCG---------ATA---AGAAAAGTACCTTCA---GGAATT------------------------------------TTCTGGAGA---TTACTGATCGGATCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCGTAATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCAGCATCAAAA------AGT---GGTAACAAAGCACTT---GTT---ACA---GCT---TTC---GGT---GCAATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGTTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---I-RKVPS-GI------------FWR-LLIGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422323 [IV-Alpha8-SAR11/IMCC9063] clone_med-20m-g11_DQ422323 gi|90024166|gb|DQ422323| Uncultured bacterium clone med-20m-g11 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-g11 putative proteorhodopsin gene, partial cds. DQ422323 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCGATAAGAAAAGTACCTTCAGGAATTTTCTGGAGATTACTAATCGGATCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGTTACATCAACGCTACACTTGGTTTCGTAATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCAGGTGAAGCTGGAAAAGCAGCATCTAAAAGTGGTAACAAAGCACTTGTTACAGCTTTCGGTGCAATGAGAATGATCGTAACAATCGGTTGGGCTATTTATCCA RYIDWLITVPLQMIEFYLILAAIRKVPSGIFWRLLIGSVVMLVGGYLGEAGYINATLGFVIGMAGWIYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCG---------ATA---AGAAAAGTACCTTCA---GGAATT------------------------------------TTCTGGAGA---TTACTAATCGGATCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCGTAATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCAGCATCTAAA------AGT---GGTAACAAAGCACTT---GTT---ACA---GCT---TTC---GGT---GCAATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---I-RKVPS-GI------------FWR-LLIGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422346 [IV-Alpha8-SAR11/IMCC9063] clone_50-2_DQ422346 gi|90024212|gb|DQ422346| Uncultured bacterium clone 50-2 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 50-2 putative proteorhodopsin gene, partial cds. DQ422346 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCGATAAGAAAAGTACCTTCAGGAATTTTCTGGAGATTACTAATCGGATCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGTTACATCAACGCTACACTTGGTTTCGTAATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCAGGTGAAGCTGGAAAAGCAGCATCTAAAAGTGGTAACAAAGCACTTGTTACAGCTTTCGGTGCAATGAGAATGATCGTAACAATCGGTTGGGCTATTTATCCA RYIDWLITVPLQMIEFYLILAAIRKVPSGIFWRLLIGSVVMLVGGYLGEAGYINATLGFVIGMAGWIYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCG---------ATA---AGAAAAGTACCTTCA---GGAATT------------------------------------TTCTGGAGA---TTACTAATCGGATCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCGTAATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCAGCATCTAAA------AGT---GGTAACAAAGCACTT---GTT---ACA---GCT---TTC---GGT---GCAATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---I-RKVPS-GI------------FWR-LLIGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422537 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-50m-h6_DQ422537 gi|90024594|gb|DQ422537| Uncultured bacterium clone med-tb04-50m-h6 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-h6 putative proteorhodopsin gene, partial cds. DQ422537 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCGATAAGAAAAGTACCTTCAGGAATTTTCTGGAGATTACTAATCGGATCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGTTACATCAACGCTACACTTGGTTTCGTAATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCAGGTGAAGCTGGAAAAGCAGCATCTAAAAGTGGTAACAAAGCACTTGTTACAGCTTTCGGTGCAATGAGAATGATCGTAACAATCGGTTGGGCTATTTATCCA RYIDWLITVPLQMIEFYLILAAIRKVPSGIFWRLLIGSVVMLVGGYLGEAGYINATLGFVIGMAGWIYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCG---------ATA---AGAAAAGTACCTTCA---GGAATT------------------------------------TTCTGGAGA---TTACTAATCGGATCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCGTAATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCAGCATCTAAA------AGT---GGTAACAAAGCACTT---GTT---ACA---GCT---TTC---GGT---GCAATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---I-RKVPS-GI------------FWR-LLIGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422561 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-0m-b6_DQ422561 gi|90024642|gb|DQ422561| Uncultured bacterium clone med-tb04-0m-b6 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-b6 putative proteorhodopsin gene, partial cds. DQ422561 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCGATAAGAAAAGTACCTTCAGGAATTTTCTGGAGATCACTAATCGGATCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGTTACATCAACGCTACACTTGGTTTCGTTATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCAGGTGAAGCTGGAAAAGCAGCATCTAAAAGTGGTAACAAAGCACTTGTTACAGCTTTCGGTGCAATGAGAATGATCGTAACAATCGGTTGGGCTATTTACCCA RYIDWLITVPLQMIEFYLILAAIRKVPSGIFWRSLIGSVVMLVGGYLGEAGYINATLGFVIGMAGWIYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCG---------ATA---AGAAAAGTACCTTCA---GGAATT------------------------------------TTCTGGAGA---TCACTAATCGGATCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCGTTATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCAGCATCTAAA------AGT---GGTAACAAAGCACTT---GTT---ACA---GCT---TTC---GGT---GCAATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGTTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---I-RKVPS-GI------------FWR-SLIGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422642 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-20m-a8_DQ422642 gi|90024804|gb|DQ422642| Uncultured bacterium clone med-tb04-20m-a8 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-a8 putative proteorhodopsin gene, partial cds. DQ422642 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCGATAAGAAAAGTACCTTCAGGAATTTTCTGGAGATTACTAATCGGATCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGTTACATCAACGCTACACTTGGTTTCGTTATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCAGGTGAAGCTGGAAAAGCAGCATCTAAAAGTGGTAACAAAGCACTTGTTACAGCTTTCGGTGCAATGAGAATGATCATAACAATCGGTTGGGCTATTTATCCA RYIDWLITVPLQMIEFYLILAAIRKVPSGIFWRLLIGSVVMLVGGYLGEAGYINATLGFVIGMAGWIYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIITIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCG---------ATA---AGAAAAGTACCTTCA---GGAATT------------------------------------TTCTGGAGA---TTACTAATCGGATCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCGTTATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCAGCATCTAAA------AGT---GGTAACAAAGCACTT---GTT---ACA---GCT---TTC---GGT---GCAATG---AGAATGATCATAACAATC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---I-RKVPS-GI------------FWR-LLIGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIITI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422581 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-0m-d4_DQ422581 gi|90024682|gb|DQ422581| Uncultured bacterium clone med-tb04-0m-d4 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-d4 putative proteorhodopsin gene, partial cds. DQ422581 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGCTACATAGACTGGCTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCGATAAGAAAAGTACCTTCAGGAATTTTCTGGAGATTACTAATCGGATCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGTTACATCAACGCTACACTTGGTTTCGTAATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCAGGTGAAGCTGGAAAAGCAGCATCTAAAAGTGGTAACAAAGCACTTGTTACAGCTTTCGGTGCAATGAGAATGATCGTAACAATCGGTTGGGCTATTTATCCA SYIDWLITVPLQMIEFYLILAAIRKVPSGIFWRLLIGSVVMLVGGYLGEAGYINATLGFVIGMAGWIYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATAGACTGG------------------------CTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCG---------ATA---AGAAAAGTACCTTCA---GGAATT------------------------------------TTCTGGAGA---TTACTAATCGGATCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCGTAATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCAGCATCTAAA------AGT---GGTAACAAAGCACTT---GTT---ACA---GCT---TTC---GGT---GCAATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQMIEFYLILAA---I-RKVPS-GI------------FWR-LLIGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ203413 [IV-Alpha8-SAR11/IMCC9063] MedHO102G3_env_samples_DQ203413 gi|77547274|gb|DQ203413| Uncultured bacterium clone MedHO102G3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102G3 predicted proteorhodopsin gene, partial cds DQ203413 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGATTGGCTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCGATAAGAAAAGTACCTTCAGGAATTTTCTGGAGATTACTAATCGGATCAGTAGTGATGCTAGTAGGTGGATACTTAGGAGAAGCAGGTTACATCAACGCTACACTTGGTTTCGTAATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCAGGTGAAGCTGGAAAAGCAGCATCTAAAAGTGGTAACAAAGCACTTGTTACAGCTTTCGGTGCAATGAGAATGATCGTAACAATCGGTTGGGCTATTTATCCA RYIDWLITVPLQMIEFYLILAAIRKVPSGIFWRLLIGSVVMLVGGYLGEAGYINATLGFVIGMAGWIYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGATTGG------------------------CTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCG---------ATA---AGAAAAGTACCTTCA---GGAATT------------------------------------TTCTGGAGA---TTACTAATCGGATCAGTAGTGATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCGTAATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCAGCATCTAAA------AGT---GGTAACAAAGCACTT---GTT---ACA---GCT---TTC---GGT---GCAATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---I-RKVPS-GI------------FWR-LLIGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ203455 [IV-Alpha8-SAR11/IMCC9063] medHO10C11_env_samples_DQ203455 gi|77547358|gb|DQ203455| Uncultured bacterium clone medHO10C11 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10C11 predicted proteorhodopsin gene, partial cds DQ203455 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGTTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCGATAAGAAAAGTACCTTCAGGAATTTTCTGGAGATTACTAATCGGATCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGTTACATCAACGCTACACTTGGTTTCGTAATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCAGGTGAAGCTGGAAAAGCAGCATCTAAAAGTGGTAACAAAGCACTTGTTACAGCTTTCGGTGCAATGAGAATGATCGTAACAATCGGGTGGGCCATTTATCCA RYIDWLITVPLQMIEFYLILAAIRKVPSGIFWRLLIGSVVMLVGGYLGEAGYINATLGFVIGMAGWIYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------TTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCG---------ATA---AGAAAAGTACCTTCA---GGAATT------------------------------------TTCTGGAGA---TTACTAATCGGATCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCGTAATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCAGCATCTAAA------AGT---GGTAACAAAGCACTT---GTT---ACA---GCT---TTC---GGT---GCAATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---I-RKVPS-GI------------FWR-LLIGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422649 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-20m-b3_DQ422649 gi|90024818|gb|DQ422649| Uncultured bacterium clone med-tb04-20m-b3 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-b3 putative proteorhodopsin gene, partial cds. DQ422649 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCGATAAGAAAAGTACCTTCAGGAATTTTCTGGAGATTACTAATCGGATCAGTGGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGTTACATCAACGCTACACTTGGTTTCGTAATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCAGGTGAAGCTGGTAAAGCAGCATCTAAGAGTGGTAACAAAGCACTTGTTACAGCTTTCGGTGCAATGAGAATGATCGTAACAATCGGTTGGGCTATTTATCCA RYIDWLITVPLQMIEFYLILAAIRKVPSGIFWRLLIGSVVMLVGGYLGEAGYINATLGFVIGMAGWIYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCG---------ATA---AGAAAAGTACCTTCA---GGAATT------------------------------------TTCTGGAGA---TTACTAATCGGATCAGTGGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCGTAATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCAGCATCTAAG------AGT---GGTAACAAAGCACTT---GTT---ACA---GCT---TTC---GGT---GCAATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---I-RKVPS-GI------------FWR-LLIGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422463 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-50m-b3_DQ422463 gi|90024446|gb|DQ422463| Uncultured bacterium clone med-tb04-50m-b3 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-b3 putative proteorhodopsin gene, partial cds. DQ422463 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCGACAAGAAAAGTACCTTCAGGAATTTTCTGGAGATTACTAATCGGATCAGTGGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGTTACATCAACGCTACACTTGGTTTCGTAACCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCAGGTGAAGCTGGTAAAGCAGCATCTAAGAGTGGTAACAAAGCACTTGTTACAGCTTTCGGTGCAATGAGAATGATCGTAACAATCGGTTGGGCTATTTATCCA RYIDWLITVPLQMIEFYLILAATRKVPSGIFWRLLIGSVVMLVGGYLGEAGYINATLGFVTGMAGWIYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCG---------ACA---AGAAAAGTACCTTCA---GGAATT------------------------------------TTCTGGAGA---TTACTAATCGGATCAGTGGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCGTAACCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCAGCATCTAAG------AGT---GGTAACAAAGCACTT---GTT---ACA---GCT---TTC---GGT---GCAATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---T-RKVPS-GI------------FWR-LLIGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVTGMAGWIYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422701 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-20m-f7_DQ422701 gi|90024922|gb|DQ422701| Uncultured bacterium clone med-tb04-20m-f7 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-f7 putative proteorhodopsin gene, partial cds. DQ422701 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCGATAAGAAAAGTACCTTCAGGAATTTTCTGGAGATTACTAATCGGATCAGTGGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGTTACATCAACGCTACACTTGGTTTCGTAATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCAGGTGAAGCTGGTAAAGCAGCATCTAAGAGTGGTAACAAAGCACTTGTTACAGCTTTCGGTGCAATGAGAATGATCGTAACAATCGGTTGGGCGATTTACCCA RYIDWLITVPLQMIEFYLILAAIRKVPSGIFWRLLIGSVVMLVGGYLGEAGYINATLGFVIGMAGWIYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCG---------ATA---AGAAAAGTACCTTCA---GGAATT------------------------------------TTCTGGAGA---TTACTAATCGGATCAGTGGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCGTAATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCAGCATCTAAG------AGT---GGTAACAAAGCACTT---GTT---ACA---GCT---TTC---GGT---GCAATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGTTGG---------GCGATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---I-RKVPS-GI------------FWR-LLIGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422547 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-0m-a4_DQ422547 gi|90024614|gb|DQ422547| Uncultured bacterium clone med-tb04-0m-a4 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-a4 putative proteorhodopsin gene, partial cds. DQ422547 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATTGACTGGCTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCGATAAGAAAAGTACCTTCAGGAATTTTCTGGAGATTACTAATCGGATCAGTAGTTATGCTAGTAGGTGGATACTTAGGAGAAGCAGGTTACATCAACGCTACACTTGGTTTCGTAATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCAGGTGAAGCTGGTAAAGCAGCATCTAAGAGTGGTAACAAAGCACTTGTTACAGCTTTCGGTGCAATGAGAATGATCGTAACAATTGGTTGGGCGATTTATCCA RYIDWLITVPLQMIEFYLILAAIRKVPSGIFWRLLIGSVVMLVGGYLGEAGYINATLGFVIGMAGWIYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCG---------ATA---AGAAAAGTACCTTCA---GGAATT------------------------------------TTCTGGAGA---TTACTAATCGGATCAGTAGTTATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCGTAATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCAGCATCTAAG------AGT---GGTAACAAAGCACTT---GTT---ACA---GCT---TTC---GGT---GCAATG---AGAATGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCGATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---I-RKVPS-GI------------FWR-LLIGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422491 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-50m-d7_DQ422491 gi|90024502|gb|DQ422491| Uncultured bacterium clone med-tb04-50m-d7 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-d7 putative proteorhodopsin gene, partial cds. DQ422491 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATTGACTGGCTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCGATAAGAAAAGTACCTTCAGGAATTTTCTGGAGATTACTAATCGGATCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGTTACATCAACGCTACACTTGGTTTCGTAATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCAGGTGAAGCTGGTAAAGCAGCATCTAAGAGTGGTAACAAAGCGCTTGTTACAGCTTTCGGTGCAATGAGAATGATCGTGACAATCGGTTGGGCTATTTATCCA RYIDWLITVPLQMIEFYLILAAIRKVPSGIFWRLLIGSVVMLVGGYLGEAGYINATLGFVIGMAGWIYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCG---------ATA---AGAAAAGTACCTTCA---GGAATT------------------------------------TTCTGGAGA---TTACTAATCGGATCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCGTAATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCAGCATCTAAG------AGT---GGTAACAAAGCGCTT---GTT---ACA---GCT---TTC---GGT---GCAATG---AGAATGATCGTGACAATC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---I-RKVPS-GI------------FWR-LLIGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ203621 [IV-Alpha8-SAR11/IMCC9063] medHO120D9_env_samples_DQ203621 gi|77547690|gb|DQ203621| Uncultured bacterium clone medHO120D9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120D9 predicted proteorhodopsin gene, partial cds DQ203621 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGACTGGTTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCGATAAGAAAAGTACCTTCAGGAATTTTCTGGAGATTACTAATCGGATCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGTTATATCAACGCTACACTTGGTTTCGTAATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCAGGTGAAGCTGGTAAAGCAGCATCTAAGAGTGGTAACAAAGCACTTGTTACAGCTTTCGGTGCAATGAGAATGATCGTGACAATCGGTTGGGCAATCTATCCA SYIDWLITVPLQMIEFYLILAAIRKVPSGIFWRLLIGSVVMLVGGYLGEAGYINATLGFVIGMAGWIYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGACTGG------------------------TTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCG---------ATA---AGAAAAGTACCTTCA---GGAATT------------------------------------TTCTGGAGA---TTACTAATCGGATCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCGTAATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCAGCATCTAAG------AGT---GGTAACAAAGCACTT---GTT---ACA---GCT---TTC---GGT---GCAATG---AGAATGATCGTGACAATC---------------------------------------------------------------GGTTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQMIEFYLILAA---I-RKVPS-GI------------FWR-LLIGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ203499 [IV-Alpha8-SAR11/IMCC9063] MedHO1202A6_env_samples_DQ203499 gi|77547446|gb|DQ203499| Uncultured bacterium clone MedHO1202A6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202A6 predicted proteorhodopsin gene, partial cds DQ203499 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGTTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCGATAAGAAAAGTACCTTCAGGAATTTTCTGGAGATTACTAATCGGATCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGTTACATCAACGCTACACTTGGTTTCGTAATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCAGGTGAAGCTGGTAAAGCAGCATCTAAGAGTGGTAACAAAGCACTTGTTACAGCTTTCGGTGCAATGAGAATGATCGTAACAATCGGGTGGGCGATTTACCCA RYIDWLITVPLQMIEFYLILAAIRKVPSGIFWRLLIGSVVMLVGGYLGEAGYINATLGFVIGMAGWIYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------TTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCG---------ATA---AGAAAAGTACCTTCA---GGAATT------------------------------------TTCTGGAGA---TTACTAATCGGATCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCGTAATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCAGCATCTAAG------AGT---GGTAACAAAGCACTT---GTT---ACA---GCT---TTC---GGT---GCAATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGGTGG---------GCGATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---I-RKVPS-GI------------FWR-LLIGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ203677 [IV-Alpha8-SAR11/IMCC9063] medHO155B6_env_samples_DQ203677 gi|77547802|gb|DQ203677| Uncultured bacterium clone medHO155B6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155B6 predicted proteorhodopsin gene, partial cds DQ203677 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGTTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCGATAAGAAAAGTACCTTCAGGAATTTTCTGGAGATTACTAATCGGATCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGTTACATCAACGCTACACTTGGTTTCGTAATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCAGGTGAAGCTGGAAAAGCAGCATCTAAAAGTGGTAACAAAGCACTTGTTACAGCTTTCGGTGCAATGAGAATGATCGTAACAATCGGTTGGGCAATATACCCA RYIDWLITVPLQMIEFYLILAAIRKVPSGIFWRLLIGSVVMLVGGYLGEAGYINATLGFVIGMAGWIYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------TTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCG---------ATA---AGAAAAGTACCTTCA---GGAATT------------------------------------TTCTGGAGA---TTACTAATCGGATCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCGTAATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCAGCATCTAAA------AGT---GGTAACAAAGCACTT---GTT---ACA---GCT---TTC---GGT---GCAATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGTTGG---------GCAATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---I-RKVPS-GI------------FWR-LLIGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ203687 [IV-Alpha8-SAR11/IMCC9063] medHO155C6_env_samples_DQ203687 gi|77547822|gb|DQ203687| Uncultured bacterium clone medHO155C6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155C6 predicted proteorhodopsin gene, partial cds DQ203687 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGTTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCGATAAGAAAAGTACCTTCAGGAATTTTCTGGAGATTACTAATCGGATCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGTTACATCAACGCTACACTTGGTTTCGTAATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCAGGTGAAGCTGGAAAAGCAGCATCTAAAAGTGGTAACAAAGCACTTGTTACAGCTTTCGGTGCAATGAGAATGATCGTAACAATCGGTTGGGCAATATACCCA RYIDWLITVPLQMIEFYLILAAIRKVPSGIFWRLLIGSVVMLVGGYLGEAGYINATLGFVIGMAGWIYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------TTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCG---------ATA---AGAAAAGTACCTTCA---GGAATT------------------------------------TTCTGGAGA---TTACTAATCGGATCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCGTAATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCAGCATCTAAA------AGT---GGTAACAAAGCACTT---GTT---ACA---GCT---TTC---GGT---GCAATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGTTGG---------GCAATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---I-RKVPS-GI------------FWR-LLIGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ062258 [IV-Alpha8-SAR11/IMCC9063] MEDPR42A11_env_samples_DQ062258 gi|67483461|gb|DQ062258| Uncultured bacterium clone MEDPR42A11 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR42A11 proteorhodopsin gene, partial cds DQ062258 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na AGATACATTGACTGGTTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCGATAAGAAAAGTACCTTCAGGAATTTTCTGGAGATTACTAATCGGATCAGTGGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGTTACATCAACGCTACACTTGGTTTCGTAATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCAGGTGAAGCTGGTAAAGCAGCATCTAAGAGTGGTAACAAAGCACTTGTTACAGCTTTCGGTGCAATGAGAATGATCGTAACAATCGGTTGGCCAATTTACCCA RYIDWLITVPLQMIEFYLILAAIRKVPSGIFWRLLIGSVVMLVGGYLGEAGYINATLGFVIGMAGWIYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTIGWPIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------TTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCG---------ATA---AGAAAAGTACCTTCA---GGAATT------------------------------------TTCTGGAGA---TTACTAATCGGATCAGTGGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCGTAATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCAGCATCTAAG------AGT---GGTAACAAAGCACTT---GTT---ACA---GCT---TTC---GGT---GCAATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGTTGG---------CCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---I-RKVPS-GI------------FWR-LLIGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTI---------------------GW---PIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ088869 [IV-Alpha8-SAR11/IMCC9063] clone_MEDeBAC42A11_1_DQ088869 gi|67906594|gb|DQ088869| Uncultured bacterium clone MEDeBAC42A11 1 predicted acetyl-CoA synthetase gene, partial cds predicted proteorhodopsin and predicted ferredoxin genes, complete cds and predicted thioredoxin reductase gene, partial cds. Uncultured bacterium clone MEDeBAC42A11 1 predicted acetyl-CoA synthetase gene, partial cds predicted proteorhodopsin and predicted ferredoxin genes, complete cds and predicted thioredoxin reductase gene, partial cds. DQ088869 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 05-oct-05 #na 12 m water collected on a transect from Haifa to Cyprus 33deg25N, 33deg56E to 32deg54N, 34deg44E Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na CTAAAGAGGGAGTTTTTTATGAATAAACTAAAATTGTTTGCATTAGCAGCATCAGCTCTAGTGGGCTTTGCTGGTGCGGCAAACGCAGCAGAGACTGTTTTGTTAGATACGGATGACCGTGTAGGAATATCATTTTGGTTAATTTCTATGGGTATGGCTGCAGCAACTGTCTTTTTCTTTATGGAAAGAGGTTCAGTAGCTGGTGGTTGGAAAACATCTATAACAGTTGCAGGTCTAGTAACAGGTGTTGCATTTGTTCACTACATGTCCATGAGAGAAGTATGGATCATTACAGGTGACTCACCAACAGTGTACAGATACATTGACTGGTTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCGATAAGAAAAGTACCTTCAGGAATTTTCTGGAGATTACTAATCGGATCAGTGGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGTTACATCAACGCTACACTTGGTTTCGTAATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCAGGTGAAGCTGGTAAAGCAGCATCTAAGAGTGGTAACAAAGCACTTGTTACAGCTTTCGGTGCAATGAGAATGATCGTAACAATCGGTTGGCCAATTTACCCATTAGGTTACATTTTTGGTTACCTAACAGGTGGAATTGATGCAGCTTCATTGAACATCATTTACAACTTAGCTGACTTTATTAACAAGATCGCATTCGGTCTAGTTATTTGGGCAGCTGCAGTTTCAAGTACACCAGCGAGAGCTAGA LKREFFMNKLKLFALAASALVGFAGAANAAETVLLDTDDRVGISFWLISMGMAAATVFFFMERGSVAGGWKTSITVAGLVTGVAFVHYMSMREVWIITGDSPTVYRYIDWLITVPLQMIEFYLILAAIRKVPSGIFWRLLIGSVVMLVGGYLGEAGYINATLGFVIGMAGWIYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTIGWPIYPLGYIFGYLTGGIDAASLNIIYNLADFINKIAFGLVIWAAAVSSTPARAR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAAAGAGGGAGTTTTTTATGAATAAACTAAAATTGTTTGCATTAGCAGCATCAGCTCTAGTGGGCTTTGCTGGTGCGGCAAACGCAGCAGAGACTGTTTTGTTAGATACGGATGACCGTGTAGGAATATCATTTTGGTTAATTTCTATGGGTATGGCTGCAGCAACTGTCTTTTTCTTTATGGAAAGAGGTTCAGTAGCTGGT---GGTTGGAAAACATCTATAACAGTTGCAGGTCTAGTAACAGGTGTTGCATTTGTTCACTACATGTCCATGAGAGAAGTATGGATC------------------------------ATTACA---------------------GGTGACTCACCAACAGTGTACAGATACATTGACTGG------------------------TTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCG---------ATA---AGAAAAGTACCTTCA---GGAATT------------------------------------TTCTGGAGA---TTACTAATCGGATCAGTGGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCGTAATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCAGCATCTAAG------AGT---GGTAACAAAGCACTT---GTT---ACA---GCT---TTC---GGT---GCAATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGTTGG---------CCAATTTACCCATTAGGTTACATTTTTGGTTACCTA---------------------------------------ACAGGTGGAATTGATGCAGCTTCATTGAACATCATTTACAACTTAGCTGACTTTATTAACAAGATCGCATTCGGTCTAGTTATTTGGGCAGCTGCAGTTTCAAGT---ACACCAGCGAGAGCTAGA--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------LKREFFMNKLKLFALAASALVGFAGAANAAETVLLDTDDRVGISFWLISMGMAAATVFFFMERGSVAG-GWKTSITVAGLVTGVAFVHYMSMREVWI----------IT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---I-RKVPS-GI------------FWR-LLIGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTI---------------------GW---PIYPLGYIFGYL-------------TGGIDAASLNIIYNLADFINKIAFGLVIWAAAVSS-TPARAR----------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU079243 [IV-Alpha8-SAR11/IMCC9063] clone_B_Mtd1_015_EU079243 gi|156106645|gb|EU079243| Uncultured organism clone B Mtd1 015 putative proteorhodopsin gene, partial cds. Uncultured organism clone B Mtd1 015 putative proteorhodopsin gene, partial cds. EU079243 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; na light-energy conversion (ion transport) unknown [unclassified sequences/environmental samples] taxon:155900 genomic DNA other 27-FEB-2008 #na Sargasso Sea surface water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99-109 (2008) 18211270 #na GGATATTTAGGAGAAGCAGGTTACATCAACGCTACACTTGGTTTCGTAATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCAGGTGAAGCTGGTAAGGCAGCATCTAAGAGTGGTAACAAAGCACTTGTTATAGCTTTCGGTGCAATGAGAATGATCGTTACTATAGGTTGGGC GYLGEAGYINATLGFVIGMAGWIYILYEVFSGEAGKAASKSGNKALVIAFGAMRMIVTIGW ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGATATTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCGTAATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAGGCAGCATCTAAG------AGT---GGTAACAAAGCACTT---GTT---ATA---GCT---TTC---GGT---GCAATG---AGAATGATCGTTACTATA---------------------------------------------------------------GGTTGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-I-A-F-G-AM-RMIVTI---------------------GW--------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU079241 [IV-Alpha8-SAR11/IMCC9063] clone_B_Mtd1_020_EU079241 gi|156106641|gb|EU079241| Uncultured organism clone B Mtd1 020 putative proteorhodopsin gene, partial cds. Uncultured organism clone B Mtd1 020 putative proteorhodopsin gene, partial cds. EU079241 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; na light-energy conversion (ion transport) unknown [unclassified sequences/environmental samples] taxon:155900 genomic DNA other 27-FEB-2008 #na Sargasso Sea surface water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99-109 (2008) 18211270 #na GGATATTTAGGAGAAGCAGGTTACATCAACGCTACACTTGGTTTCGTAATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCAGGTGAAGCTGGTAAGGCAGCATCTAAGAGTGGTAACAAAGCACTTGTTATAGCTTTCGGTGCAATGAGAATGATCGTTACTATAGGTTGGGC GYLGEAGYINATLGFVIGMAGWIYILYEVFSGEAGKAASKSGNKALVIAFGAMRMIVTIGW ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGATATTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCGTAATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAGGCAGCATCTAAG------AGT---GGTAACAAAGCACTT---GTT---ATA---GCT---TTC---GGT---GCAATG---AGAATGATCGTTACTATA---------------------------------------------------------------GGTTGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-I-A-F-G-AM-RMIVTI---------------------GW--------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ203843 [IV-Alpha8-SAR11/IMCC9063] SS114a40G7_env_samples_DQ203843 gi|77548134|gb|DQ203843| Uncultured bacterium clone SS114a40G7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40G7 predicted proteorhodopsin gene, partial cds DQ203843 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATAGACTGGCTAATCACTGTGCCATTACAGATGATTGAATTCTATTTAATTCTTGCAGCTGTAAGAAAAGTACCAGGCGGTATCTTCTGGAGATTATTAATTGGATCTTTAGTGATGCTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACGCACTACTTGGTTTCATAATCGGTATGGCTGGATGGTTCTACATCTTGTATGAAGTATTCTCAGGTGAGGCTGGTAAAGCGGCAGCTAAAAGTGGTAACAAAGGATTGTCTACTGCATTTGGTGCAATGAGAATGATCGTAACAATTGGTTGGGCCATATACCCA SYIDWLITVPLQMIEFYLILAAVRKVPGGIFWRLLIGSLVMLIGGYLGEAGYINALLGFIIGMAGWFYILYEVFSGEAGKAAAKSGNKGLSTAFGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATAGACTGG------------------------CTAATCACTGTGCCATTACAGATGATTGAATTCTATTTAATTCTTGCAGCT---------GTA---AGAAAAGTACCAGGC---GGTATC------------------------------------TTCTGGAGA---TTATTAATTGGATCTTTAGTGATGCTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCA------------------CTACTTGGT---TTCATAATCGGTATGGCTGGATGGTTCTACATCTTGTATGAAGTA---------------TTC------TCA---GGTGAGGCTGGTAAAGCGGCAGCTAAA------AGT---GGTAACAAAGGATTG---TCT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCCATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQMIEFYLILAA---V-RKVPG-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------LLG-FIIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKGL-S-T-A-F-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ203845 [IV-Alpha8-SAR11/IMCC9063] SS114a40G9_env_samples_DQ203845 gi|77548138|gb|DQ203845| Uncultured bacterium clone SS114a40G9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40G9 predicted proteorhodopsin gene, partial cds DQ203845 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATAGACTGGCTAATCACTGTGCCATTACAGATGATTGAATTCTATTTAATTCTTGCAGCTGTAAGAAAAGTACCAGGCGGTATCTTCTGGAGATTATTAATTGGATCTTTAGTGATGCTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACGCACTACTTGGTTTCATAATCGGTATGGCTGGATGGTTCTACATCTTGTATGAAGTATTCTCAGGTGAGGCTGGTAAAGCGGCAGCTAAAAGTGGTAACAAAGGATTGTCTACTGCATTTGGTGCAATGAGAATGATCGTAACAATTGGTTGGGCCATATACCCA SYIDWLITVPLQMIEFYLILAAVRKVPGGIFWRLLIGSLVMLIGGYLGEAGYINALLGFIIGMAGWFYILYEVFSGEAGKAAAKSGNKGLSTAFGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATAGACTGG------------------------CTAATCACTGTGCCATTACAGATGATTGAATTCTATTTAATTCTTGCAGCT---------GTA---AGAAAAGTACCAGGC---GGTATC------------------------------------TTCTGGAGA---TTATTAATTGGATCTTTAGTGATGCTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCA------------------CTACTTGGT---TTCATAATCGGTATGGCTGGATGGTTCTACATCTTGTATGAAGTA---------------TTC------TCA---GGTGAGGCTGGTAAAGCGGCAGCTAAA------AGT---GGTAACAAAGGATTG---TCT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCCATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQMIEFYLILAA---V-RKVPG-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------LLG-FIIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKGL-S-T-A-F-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ203848 [IV-Alpha8-SAR11/IMCC9063] SS114a40H2_env_samples_DQ203848 gi|77548144|gb|DQ203848| Uncultured bacterium clone SS114a40H2 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40H2 predicted proteorhodopsin gene, partial cds DQ203848 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGATTGGCTAATCACTGTGCCATTACAGATGATTGAATTCTATTTAATTCTTGCAGCTGTAAGAAAAGTACCAGGTGGTATCTTCTGGAGATTGTTAATTGGATCTTTAGTGATGCTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACGCACTACTTGGTTTCATAATCGGTATGGCTGGATGGTTCTACATCTTATATGAAGTATTCTCTGGTGAGGCTGGTAAAGCAGCAGCTAAAAGTGGTAACAAAGGTTTGTCTACTGCATTTGGCGCAATGAGAATGATCGTAACAATAGGTTGGGCCATATATCCA SYIDWLITVPLQMIEFYLILAAVRKVPGGIFWRLLIGSLVMLIGGYLGEAGYINALLGFIIGMAGWFYILYEVFSGEAGKAAAKSGNKGLSTAFGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGATTGG------------------------CTAATCACTGTGCCATTACAGATGATTGAATTCTATTTAATTCTTGCAGCT---------GTA---AGAAAAGTACCAGGT---GGTATC------------------------------------TTCTGGAGA---TTGTTAATTGGATCTTTAGTGATGCTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCA------------------CTACTTGGT---TTCATAATCGGTATGGCTGGATGGTTCTACATCTTATATGAAGTA---------------TTC------TCT---GGTGAGGCTGGTAAAGCAGCAGCTAAA------AGT---GGTAACAAAGGTTTG---TCT---ACT---GCA---TTT---GGC---GCAATG---AGAATGATCGTAACAATA---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQMIEFYLILAA---V-RKVPG-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------LLG-FIIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKGL-S-T-A-F-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ203336 [IV-Alpha8-SAR11/IMCC9063] SS114a80G7_env_samples_DQ203336 gi|77547120|gb|DQ203336| Uncultured bacterium clone SS114a80G7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a80G7 predicted proteorhodopsin gene, partial cds DQ203336 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_80m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_2003 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTATATTGACTGGCTAATCACTGTGCCACTACAGATGATTGAATTCTATTTAATTCTTGCAGCTGTAAGAAAAGTACCAGGTGGTATTTTCTGGAGATTGTTAATTGGATCTTTAGTGATGCTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACGCACTACTTGGTTTCATAATCGGTATGGCTGGATGGTTCTACATCTTATATGAAGTATTCTCAGGTGAGGCTGGTAAAGCAGCAGCTAAAAGTGGTAACAAAGGTTTGTCTACTGCATTTGGTGCAATGAGAATGATCGTAACAATAGGTTGGGCCATTTATCCA RYIDWLITVPLQMIEFYLILAAVRKVPGGIFWRLLIGSLVMLIGGYLGEAGYINALLGFIIGMAGWFYILYEVFSGEAGKAAAKSGNKGLSTAFGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTATATTGACTGG------------------------CTAATCACTGTGCCACTACAGATGATTGAATTCTATTTAATTCTTGCAGCT---------GTA---AGAAAAGTACCAGGT---GGTATT------------------------------------TTCTGGAGA---TTGTTAATTGGATCTTTAGTGATGCTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCA------------------CTACTTGGT---TTCATAATCGGTATGGCTGGATGGTTCTACATCTTATATGAAGTA---------------TTC------TCA---GGTGAGGCTGGTAAAGCAGCAGCTAAA------AGT---GGTAACAAAGGTTTG---TCT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTAACAATA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---V-RKVPG-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------LLG-FIIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKGL-S-T-A-F-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ339313 [IV-Alpha8-SAR11/IMCC9063] clone_S-S80M-G1_DQ339313 gi|85681599|gb|DQ339313| Uncultured bacterium clone S-S80M-G1 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-G1 predicted proteorhodopsin gene, partial cds. DQ339313 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATCACTGTGCCACTACAGATGATTGAATTCTATTTAATTCTTGCAGCTGTAAGAAAAGTACCAGGTGGTATTTTCTGGAGATTGTTAATTGGATCTTTAGTGATGCTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACGCACTACTTGGTTTCATAATCGGTATGGCTGGATGGTTCTACATCTTATATGAAGTATTCTCAGGTGAAGCTGGTAAAGCAGCAGCTAAAAGTGGTAACAAAGGTTTGTCTACTGCATTTGGTGCAATGAGAATGATCGTAACAATTGGGTGGGCCATTTATCCA RYIDWLITVPLQMIEFYLILAAVRKVPGGIFWRLLIGSLVMLIGGYLGEAGYINALLGFIIGMAGWFYILYEVFSGEAGKAAAKSGNKGLSTAFGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATCACTGTGCCACTACAGATGATTGAATTCTATTTAATTCTTGCAGCT---------GTA---AGAAAAGTACCAGGT---GGTATT------------------------------------TTCTGGAGA---TTGTTAATTGGATCTTTAGTGATGCTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCA------------------CTACTTGGT---TTCATAATCGGTATGGCTGGATGGTTCTACATCTTATATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCAGCAGCTAAA------AGT---GGTAACAAAGGTTTG---TCT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTAACAATT---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---V-RKVPG-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------LLG-FIIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKGL-S-T-A-F-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ339325 [IV-Alpha8-SAR11/IMCC9063] clone_S-S80M-H11_DQ339325 gi|85681623|gb|DQ339325| Uncultured bacterium clone S-S80M-H11 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-H11 predicted proteorhodopsin gene, partial cds. DQ339325 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATCACTGTGCCACTACAGATGATTGAATTCTATTTAATTCTTGCAGCTGTAAGAAAAGTACCAGGTGGTATTTTCTGGAGATTGTTAATTGGATCTTTAGTGATGCTAATCGGTGGATACTTAGGTGAAGCAGGATACATCAACGCACTACTTGGTTTCATAATCGGTATGGCTGGATGGTCCTACATCTTATACGAAGTATTCTCAGGTGAAGCTGGTAAAGCAGCAGCTAAAAGTGGTAACAAAGGTTTGTCTACTGCATTTGGTGCAATGAGAATGATCGTAACAATTGGGTGGGCCATTTATCCA RYIDWLITVPLQMIEFYLILAAVRKVPGGIFWRLLIGSLVMLIGGYLGEAGYINALLGFIIGMAGWSYILYEVFSGEAGKAAAKSGNKGLSTAFGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATCACTGTGCCACTACAGATGATTGAATTCTATTTAATTCTTGCAGCT---------GTA---AGAAAAGTACCAGGT---GGTATT------------------------------------TTCTGGAGA---TTGTTAATTGGATCTTTAGTGATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCA------------------CTACTTGGT---TTCATAATCGGTATGGCTGGATGGTCCTACATCTTATACGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCAGCAGCTAAA------AGT---GGTAACAAAGGTTTG---TCT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTAACAATT---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---V-RKVPG-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------LLG-FIIGMAGWSYILYEV-----F--S-GEAGKAAAK--S-GNKGL-S-T-A-F-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ339256 [IV-Alpha8-SAR11/IMCC9063] clone_S-S80M-A6_DQ339256 gi|85681487|gb|DQ339256| Uncultured bacterium clone S-S80M-A6 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-A6 predicted proteorhodopsin gene, partial cds. DQ339256 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATCACTGTGCCACTACAGATGATTGAATTTTATTTAATTCTTGCAGCTGTAAGAAAAGTACCAGGTGGCATATTCTGGAGATTATTAATTGGATCTTTAGTAATGCTTATCGGTGGATACTTAGGAGAAGCAGGATACATCAACGCACTACTTGGTTTCATAATCGGTATGGCTGGATGGTTCTACATTCTATATGAAGTATTCTCAGGTGAAGCTGGTAAAGCAGCAGCTAAAAGTGGTAACAAAGGTTTGTCTACCGCATTTGGTGCAATGAGAATGATCGTAACAATCGGGTGGGCCATATATCCA RYIDWLITVPLQMIEFYLILAAVRKVPGGIFWRLLIGSLVMLIGGYLGEAGYINALLGFIIGMAGWFYILYEVFSGEAGKAAAKSGNKGLSTAFGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATCACTGTGCCACTACAGATGATTGAATTTTATTTAATTCTTGCAGCT---------GTA---AGAAAAGTACCAGGT---GGCATA------------------------------------TTCTGGAGA---TTATTAATTGGATCTTTAGTAATGCTTATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCA------------------CTACTTGGT---TTCATAATCGGTATGGCTGGATGGTTCTACATTCTATATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCAGCAGCTAAA------AGT---GGTAACAAAGGTTTG---TCT---ACC---GCA---TTT---GGT---GCAATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---V-RKVPG-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------LLG-FIIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKGL-S-T-A-F-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ339345 [IV-Alpha8-SAR11/IMCC9063] clone_S-S4OM-B11_DQ339345 gi|85681661|gb|DQ339345| Uncultured bacterium clone S-S4OM-B11 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-B11 predicted proteorhodopsin gene, partial cds. DQ339345 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATCACTGTGCCATTACAGATGATTGAATTCTATTTAATTCTTGCAGCTGTAAGAAAAGTACCAGGTGGTATCTTCTGGAGATTATTAATTGGATCTTTAGTGATGCTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACGCACTACTTGGTTTCGTAATCGGTATGGCTGGATGGTTCTACATCTTATATGAAGTATTCTCAGGTGAAGCTGGTAAAGCAGCAGCCAAAAGTGGTAACAAAGGATTGTCTACTGCATTTGGTGCAATGAGAATGATCGTAACAATTGGGTGGGCCATATACCCA RYIDWLITVPLQMIEFYLILAAVRKVPGGIFWRLLIGSLVMLIGGYLGEAGYINALLGFVIGMAGWFYILYEVFSGEAGKAAAKSGNKGLSTAFGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATCACTGTGCCATTACAGATGATTGAATTCTATTTAATTCTTGCAGCT---------GTA---AGAAAAGTACCAGGT---GGTATC------------------------------------TTCTGGAGA---TTATTAATTGGATCTTTAGTGATGCTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCA------------------CTACTTGGT---TTCGTAATCGGTATGGCTGGATGGTTCTACATCTTATATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCAGCAGCCAAA------AGT---GGTAACAAAGGATTG---TCT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTAACAATT---------------------------------------------------------------GGGTGG---------GCCATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---V-RKVPG-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------LLG-FVIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKGL-S-T-A-F-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ203749 [IV-Alpha8-SAR11/IMCC9063] SS114a0B4_env_samples_DQ203749 gi|77547946|gb|DQ203749| Uncultured bacterium clone SS114a0B4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0B4 predicted proteorhodopsin gene, partial cds DQ203749 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTAATCACTGTGCCATTACAGATGATTGAATTCTATTTAATTCTTGCAGCTGTAAGAAAAGTACCAGGTGGTATCTTCTGGAGATTATTAATTGGATCTTTAGTGATGCTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACGCACTACTTGGTTTCATAATCGGTATGGCTGGATGGTTCTACATCTTATATGAAGTATTCTCAGGTGAAGCTGGTAAAGCAGCAGCCAAAAGTGGTAACAAAGGATTGTCTACTGCATTTGGTGCAATGAGAATGATCGTAACAATTGGTTGGGCCATTTATCCA RYIDWLITVPLQMIEFYLILAAVRKVPGGIFWRLLIGSLVMLIGGYLGEAGYINALLGFIIGMAGWFYILYEVFSGEAGKAAAKSGNKGLSTAFGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATCACTGTGCCATTACAGATGATTGAATTCTATTTAATTCTTGCAGCT---------GTA---AGAAAAGTACCAGGT---GGTATC------------------------------------TTCTGGAGA---TTATTAATTGGATCTTTAGTGATGCTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCA------------------CTACTTGGT---TTCATAATCGGTATGGCTGGATGGTTCTACATCTTATATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCAGCAGCCAAA------AGT---GGTAACAAAGGATTG---TCT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---V-RKVPG-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------LLG-FIIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKGL-S-T-A-F-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ203824 [IV-Alpha8-SAR11/IMCC9063] SS114a40E10_env_samples_DQ203824 gi|77548096|gb|DQ203824| Uncultured bacterium clone SS114a40E10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40E10 predicted proteorhodopsin gene, partial cds DQ203824 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGACTGGCTAATCACTGTGCCATTACAGATGATTGAATTCTATTTAATTCTTGCAGCTGTAAGAAAAGTACCAGGTGGTATCTTCTGGAGATTATTAATTGGATCTTTAGTGATGCTAATCGGTGGATACTTAGGAGAAGCAGGATACATTAACGCACTACTTGGTTTCATAATCGGTATGGCTGGATGGTTCTACATCTTATATGAAGTGTTCTCTGGTGAAGCTGGTAAAGCAGCAGCTAAAAGTGGAAACAAAGGTTTGTCTACTGCATTTAGCGCTATGAGAATGATCGTAACAATAGGGTGGGCAATTTACCCA RYIDWLITVPLQMIEFYLILAAVRKVPGGIFWRLLIGSLVMLIGGYLGEAGYINALLGFIIGMAGWFYILYEVFSGEAGKAAAKSGNKGLSTAFSAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGACTGG------------------------CTAATCACTGTGCCATTACAGATGATTGAATTCTATTTAATTCTTGCAGCT---------GTA---AGAAAAGTACCAGGT---GGTATC------------------------------------TTCTGGAGA---TTATTAATTGGATCTTTAGTGATGCTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACGCA------------------CTACTTGGT---TTCATAATCGGTATGGCTGGATGGTTCTACATCTTATATGAAGTG---------------TTC------TCT---GGTGAAGCTGGTAAAGCAGCAGCTAAA------AGT---GGAAACAAAGGTTTG---TCT---ACT---GCA---TTT---AGC---GCTATG---AGAATGATCGTAACAATA---------------------------------------------------------------GGGTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---V-RKVPG-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------LLG-FIIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKGL-S-T-A-F-S-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EF079839 [IV-Alpha8-SAR11/IMCC9063] clone_ID11010_EF079839 gi|126361767|gb|EF079839| Uncultured bacterium clone ID11010 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID11010 putative proteorhodopsin gene, partial cds. EF079839 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na #na Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGCTTGCCGCTACTGTATTCTTCTTCATGGAAAGAGGATCAGTTGCATCTGGATGGAAAACTTCAGTAACAGTTGCAGGTCTTGTAACTGGTATTGCATTTATCCACTACATGTACATGAGAGGTGTATGGGTACAAACAGGTGAGTCACCAACTGTATACAGATACATTGACTGGCTAATCACTGTGCCACTACAGATGATTGAATTCTATTTAATTCTTGCAGCTGTAAGAAAAGTACCAGGTGGTATCTTCTGGAGATTATTAATTGGATCTTTAGTGATGCTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAATGCACTACTTGGTTTTATAATCGGTATGGCTGGATGGTTCTACATCTTATATGAAGTATTCTCTGGTGAAGCTGGAAAAGCAGCGGCTAAAAGTGGTAGCAAAGGATTGTCTACAGCTTTTGGTGCAATGAGAATGATCGTAACAATAGGTTGGGCAATTTACCCA MLAATVFFFMERGSVASGWKTSVTVAGLVTGIAFIHYMYMRGVWVQTGESPTVYRYIDWLITVPLQMIEFYLILAAVRKVPGGIFWRLLIGSLVMLIGGYLGEAGYINALLGFIIGMAGWFYILYEVFSGEAGKAAAKSGSKGLSTAFGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACTGTATTCTTCTTCATGGAAAGAGGATCAGTTGCATCT---GGATGGAAAACTTCAGTAACAGTTGCAGGTCTTGTAACTGGTATTGCATTTATCCACTACATGTACATGAGAGGTGTATGGGTA------------------------------CAAACA---------------------GGTGAGTCACCAACTGTATACAGATACATTGACTGG------------------------CTAATCACTGTGCCACTACAGATGATTGAATTCTATTTAATTCTTGCAGCT---------GTA---AGAAAAGTACCAGGT---GGTATC------------------------------------TTCTGGAGA---TTATTAATTGGATCTTTAGTGATGCTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGCA------------------CTACTTGGT---TTTATAATCGGTATGGCTGGATGGTTCTACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCTGGAAAAGCAGCGGCTAAA------AGT---GGTAGCAAAGGATTG---TCT---ACA---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAATA---------------------------------------------------------------GGTTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFMERGSVAS-GWKTSVTVAGLVTGIAFIHYMYMRGVWV----------QT-------GESPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKVPG-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------LLG-FIIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GSKGL-S-T-A-F-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EF100791 [IV-Alpha8-SAR11/IMCC9063] clone_ID29011_EF100791 gi|126513361|gb|EF100791| Uncultured bacterium clone ID29011 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID29011 putative proteorhodopsin gene, partial cds. EF100791 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-nov-07 #na surface water Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGCTTGCCGCTACTGTATTCTTCTTCATGGAAAGAGGATCAGTTGCATCTGGATGGAAAACTTCAGTAACAGTTGCAGGTCTTGTAACTGGTATTGCATTTATCCACTACATGTACATGAGAGGTGTATGGGTACAAACAGGTGAGTCACCAACTGTATACAGATACATTGACTGGCTAATCACTGTGCCACTACAGATGATTGAATTCTATTTAATTCTTGCAGCTGTAAGAAAAGTACCAGGTGGTATCTTCTGGAGATTATTAATTGGATCTTTAGTGATGCTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAATGCACTACTTGGTTTTATAATCGGTATGGCTGGATGGTTCTACATCTTATATGAAGTATTCTCTGGTGAAGCTGGAAAAGCAGCGGCTAAAAGTGGTAGCAAAGGATTGTCTACAGCTTTTGGTGCAATGAGAATGATCGTAACAATAGGTTGGGCAATTTACCCA MLAATVFFFMERGSVASGWKTSVTVAGLVTGIAFIHYMYMRGVWVQTGESPTVYRYIDWLITVPLQMIEFYLILAAVRKVPGGIFWRLLIGSLVMLIGGYLGEAGYINALLGFIIGMAGWFYILYEVFSGEAGKAAAKSGSKGLSTAFGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACTGTATTCTTCTTCATGGAAAGAGGATCAGTTGCATCT---GGATGGAAAACTTCAGTAACAGTTGCAGGTCTTGTAACTGGTATTGCATTTATCCACTACATGTACATGAGAGGTGTATGGGTA------------------------------CAAACA---------------------GGTGAGTCACCAACTGTATACAGATACATTGACTGG------------------------CTAATCACTGTGCCACTACAGATGATTGAATTCTATTTAATTCTTGCAGCT---------GTA---AGAAAAGTACCAGGT---GGTATC------------------------------------TTCTGGAGA---TTATTAATTGGATCTTTAGTGATGCTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGCA------------------CTACTTGGT---TTTATAATCGGTATGGCTGGATGGTTCTACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCTGGAAAAGCAGCGGCTAAA------AGT---GGTAGCAAAGGATTG---TCT---ACA---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAATA---------------------------------------------------------------GGTTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFMERGSVAS-GWKTSVTVAGLVTGIAFIHYMYMRGVWV----------QT-------GESPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKVPG-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------LLG-FIIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GSKGL-S-T-A-F-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ339278 [IV-Alpha8-SAR11/IMCC9063] clone_S-S80M-C8_DQ339278 gi|85681531|gb|DQ339278| Uncultured bacterium clone S-S80M-C8 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-C8 predicted proteorhodopsin gene, partial cds. DQ339278 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTAATCACTGTGCCACTACAGATGATTGAATTCTACTTAATTCTTGCAGCTGTAAGAAAAGTACCAGGTGGTATTTTCTGGAGACTATTAATTGGATCTCTAGTGATGCTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACGCACTACTTGGCTTCATTATCGGTATGGCTGGATGGTTCTACATCTTGTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCAGCAGCTAAAAGCGGTAACAAAGGTTTGTCTACTGCGTTTAGTGCGATGAGAATGATCGTAACAATCGGCTGGGCCATTTATCCA RYIDWLITVPLQMIEFYLILAAVRKVPGGIFWRLLIGSLVMLIGGYLGEAGYINALLGFIIGMAGWFYILYEVFSGEAGKAAAKSGNKGLSTAFSAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATCACTGTGCCACTACAGATGATTGAATTCTACTTAATTCTTGCAGCT---------GTA---AGAAAAGTACCAGGT---GGTATT------------------------------------TTCTGGAGA---CTATTAATTGGATCTCTAGTGATGCTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCA------------------CTACTTGGC---TTCATTATCGGTATGGCTGGATGGTTCTACATCTTGTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCAGCAGCTAAA------AGC---GGTAACAAAGGTTTG---TCT---ACT---GCG---TTT---AGT---GCGATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGCTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---V-RKVPG-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------LLG-FIIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKGL-S-T-A-F-S-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ339290 [IV-Alpha8-SAR11/IMCC9063] clone_S-S80M-E1_DQ339290 gi|85681553|gb|DQ339290| Uncultured bacterium clone S-S80M-E1 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-E1 predicted proteorhodopsin gene, partial cds. DQ339290 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTAATCACTGTGCCACTACAGATGATTGAATTCTACTTAATTCTTGCAGCTGTAAGAAAAGTACCAGGTGGTATTTTCTGGAGACTATTAATTGGATCTCTAGTGATGCTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACGCACTACTTGGTTTCATTATCGGTATGGCTGGATGGTTCTACATCTTGTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCAGCAGCTAAAAGCGGTAACAAAGGTTTGTCTACTGCGTTTAGTGCGATGAGAATGATCGTAACAATCGGTTGGGCCATTTATCCA RYIDWLITVPLQMIEFYLILAAVRKVPGGIFWRLLIGSLVMLIGGYLGEAGYINALLGFIIGMAGWFYILYEVFSGEAGKAAAKSGNKGLSTAFSAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATCACTGTGCCACTACAGATGATTGAATTCTACTTAATTCTTGCAGCT---------GTA---AGAAAAGTACCAGGT---GGTATT------------------------------------TTCTGGAGA---CTATTAATTGGATCTCTAGTGATGCTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCA------------------CTACTTGGT---TTCATTATCGGTATGGCTGGATGGTTCTACATCTTGTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCAGCAGCTAAA------AGC---GGTAACAAAGGTTTG---TCT---ACT---GCG---TTT---AGT---GCGATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---V-RKVPG-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------LLG-FIIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKGL-S-T-A-F-S-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ203784 [IV-Alpha8-SAR11/IMCC9063] SS114a0G3_env_samples_DQ203784 gi|77548016|gb|DQ203784| Uncultured bacterium clone SS114a0G3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0G3 predicted proteorhodopsin gene, partial cds DQ203784 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTAATCACTGTGCCACTACAAATGATTGAATTCTACTTAATTCTTGCAGCTGTAAGAAAAGTACCAGGTGGTATTTTCTGGAGACTATTAATTGGATCTTTAGTGATGCTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACGCACTACTTGGTTTCATTATCGGTATGGCTGGATGGTTCTACATCTTGTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCAGCAGCTAAAAGTGGTAACAAAGGTTTGTCTACTGCGTTTAGTGCGATGAGAATGATCGTAACAATCGGTTGGGCGATCTACCCA RYIDWLITVPLQMIEFYLILAAVRKVPGGIFWRLLIGSLVMLIGGYLGEAGYINALLGFIIGMAGWFYILYEVFSGEAGKAAAKSGNKGLSTAFSAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATCACTGTGCCACTACAAATGATTGAATTCTACTTAATTCTTGCAGCT---------GTA---AGAAAAGTACCAGGT---GGTATT------------------------------------TTCTGGAGA---CTATTAATTGGATCTTTAGTGATGCTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCA------------------CTACTTGGT---TTCATTATCGGTATGGCTGGATGGTTCTACATCTTGTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCAGCAGCTAAA------AGT---GGTAACAAAGGTTTG---TCT---ACT---GCG---TTT---AGT---GCGATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGTTGG---------GCGATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---V-RKVPG-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------LLG-FIIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKGL-S-T-A-F-S-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ203304 [IV-Alpha8-SAR11/IMCC9063] SS114a80B1_env_samples_DQ203304 gi|77547056|gb|DQ203304| Uncultured bacterium clone SS114a80B1 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a80B1 predicted proteorhodopsin gene, partial cds DQ203304 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_80m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_2003 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGTTAATCACTGTACCACTACAAATGATTGAATTCTATTTAATCCTTGCAGCTGTAAGAAAAGTACCAGGCGGTATTTTCTGGAGATTATTAATTGGATCTTTAGTAATGCTTATCGGTGGATACTTAGGAGAAGCAGGATACATCAACGCACTACTTGGTTTCATAATCGGTATGGCTGGATGGTTCTACATCTTATATGAAGTATTCTCTGGTGAAGCTGGTAAAGCAGCAGCTAAAAGCGGTAACAAAGGTTTGTCTACTGCATTTGGTGCAATGAGAATGATCGTAACAATAGGTTGGGCAATTTACCCA RYIDWLITVPLQMIEFYLILAAVRKVPGGIFWRLLIGSLVMLIGGYLGEAGYINALLGFIIGMAGWFYILYEVFSGEAGKAAAKSGNKGLSTAFGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------TTAATCACTGTACCACTACAAATGATTGAATTCTATTTAATCCTTGCAGCT---------GTA---AGAAAAGTACCAGGC---GGTATT------------------------------------TTCTGGAGA---TTATTAATTGGATCTTTAGTAATGCTTATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCA------------------CTACTTGGT---TTCATAATCGGTATGGCTGGATGGTTCTACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCTGGTAAAGCAGCAGCTAAA------AGC---GGTAACAAAGGTTTG---TCT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTAACAATA---------------------------------------------------------------GGTTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---V-RKVPG-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------LLG-FIIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKGL-S-T-A-F-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ339354 [IV-Alpha8-SAR11/IMCC9063] clone_S-S4OM-C1_DQ339354 gi|85681679|gb|DQ339354| Uncultured bacterium clone S-S4OM-C1 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-C1 predicted proteorhodopsin gene, partial cds. DQ339354 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTAATCACTGTGCCATTACAGATGATTGAATTCTATTTAATTCTTGCAGCTGTAAGAAAAGTACCAGGTGGTATTTTCTGGAGATTGTTAATTGGATCTTTAGTAATGCTAATTGGTGGATACTTAGGAGAAGCAGGATACATCAACGCACTACTTGGTTTCATTATCGGTATGGCTGGATGGTTCTACATCTTGTATGAAGTGTTCTCAGGTGAAGCTGGTAAAGCGGCAGCTAAAAGTGGTAACAAAGGTTTGTCCACTGCATTTGGCGCAATGAGAATGATCGTAACAATTGGTTGGGCCATTTATCCA RYIDWLITVPLQMIEFYLILAAVRKVPGGIFWRLLIGSLVMLIGGYLGEAGYINALLGFIIGMAGWFYILYEVFSGEAGKAAAKSGNKGLSTAFGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATCACTGTGCCATTACAGATGATTGAATTCTATTTAATTCTTGCAGCT---------GTA---AGAAAAGTACCAGGT---GGTATT------------------------------------TTCTGGAGA---TTGTTAATTGGATCTTTAGTAATGCTAATTGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCA------------------CTACTTGGT---TTCATTATCGGTATGGCTGGATGGTTCTACATCTTGTATGAAGTG---------------TTC------TCA---GGTGAAGCTGGTAAAGCGGCAGCTAAA------AGT---GGTAACAAAGGTTTG---TCC---ACT---GCA---TTT---GGC---GCAATG---AGAATGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---V-RKVPG-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------LLG-FIIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKGL-S-T-A-F-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ339264 [IV-Alpha8-SAR11/IMCC9063] clone_S-S80M-B3_DQ339264 gi|85681503|gb|DQ339264| Uncultured bacterium clone S-S80M-B3 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-B3 predicted proteorhodopsin gene, partial cds. DQ339264 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATCACTGTGCCATTACAGATGATTGAATTCTATTTAATCCTTGCAGCTGTAAGAAAAGTACCAGGTGGTATTTTCTGGAGATTGTTAATTGGATCTTTAGTAATGCTAATTGGTGGATACTTAGGAGAAGCAGGATACATCAACGCACTACTTGGTTTCATTATCGGTATGGCTGGATGGTTCTACATCTTGTATGAAGTGTTCTCAGGTGAAGCCGGTAAAGCGGCAGCTAAAAGTGGTAACAAAGGTTTGTCCACTGCATTTGGCGCAATGAGAATGATCGTAACAATTGGGTGGGCCATTTATCCA RYIDWLITVPLQMIEFYLILAAVRKVPGGIFWRLLIGSLVMLIGGYLGEAGYINALLGFIIGMAGWFYILYEVFSGEAGKAAAKSGNKGLSTAFGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATCACTGTGCCATTACAGATGATTGAATTCTATTTAATCCTTGCAGCT---------GTA---AGAAAAGTACCAGGT---GGTATT------------------------------------TTCTGGAGA---TTGTTAATTGGATCTTTAGTAATGCTAATTGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCA------------------CTACTTGGT---TTCATTATCGGTATGGCTGGATGGTTCTACATCTTGTATGAAGTG---------------TTC------TCA---GGTGAAGCCGGTAAAGCGGCAGCTAAA------AGT---GGTAACAAAGGTTTG---TCC---ACT---GCA---TTT---GGC---GCAATG---AGAATGATCGTAACAATT---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---V-RKVPG-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------LLG-FIIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKGL-S-T-A-F-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ203744 [IV-Alpha8-SAR11/IMCC9063] SS114a0A8_env_samples_DQ203744 gi|77547936|gb|DQ203744| Uncultured bacterium clone SS114a0A8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0A8 predicted proteorhodopsin gene, partial cds DQ203744 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGACTGGCTAATCACTGTTCCATTACAGATGATTGAATTCTATTTAATTCTTGCAGCTGTAAGAAAAGTTCCTGGTGGAATTTTCTGGAGACTGTTAATCGGATCTTTAGTTATGTTGATCGGTGGATATTTAGGAGAAGCAGGTTATATAAATGCTCTTCTAGGTTTCATAATCGGTATGGCTGGATGGTTATACATTCTTTATGAAGTATTCTCAGGAGAAGCTGGTAAAGCAGCAGCTAAAAGTGGCAACAAAGGTCTTGCTACTGCGTTTAGCGCAATGAGAATGATCGTAACAATTGGTTGGGCCATATACCCA SYIDWLITVPLQMIEFYLILAAVRKVPGGIFWRLLIGSLVMLIGGYLGEAGYINALLGFIIGMAGWLYILYEVFSGEAGKAAAKSGNKGLATAFSAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGACTGG------------------------CTAATCACTGTTCCATTACAGATGATTGAATTCTATTTAATTCTTGCAGCT---------GTA---AGAAAAGTTCCTGGT---GGAATT------------------------------------TTCTGGAGA---CTGTTAATCGGATCTTTAGTTATGTTGATCGGTGGATATTTAGGAGAA---------GCA------------------GGT------TAT---------------------------------ATA------------------------------------------------------------------AATGCT------------------CTTCTAGGT---TTCATAATCGGTATGGCTGGATGGTTATACATTCTTTATGAAGTA---------------TTC------TCA---GGAGAAGCTGGTAAAGCAGCAGCTAAA------AGT---GGCAACAAAGGTCTT---GCT---ACT---GCG---TTT---AGC---GCAATG---AGAATGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCCATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQMIEFYLILAA---V-RKVPG-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------LLG-FIIGMAGWLYILYEV-----F--S-GEAGKAAAK--S-GNKGL-A-T-A-F-S-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ203737 [IV-Alpha8-SAR11/IMCC9063] ss114a03_env_samples_DQ203737 gi|77547922|gb|DQ203737| Uncultured bacterium clone ss114a03 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone ss114a03 predicted proteorhodopsin gene, partial cds DQ203737 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATCACTGTTCCATTACAGATGATTGAATTCTATTTAATTCTTGCAGCTGTAAGAAAAGTTCCTGGTGGAATTTTCTGGAGACTGTTAATCGGATCTTTAGTTATGTTGATCGGTGGATATTTAGGAGAAGCAGGTTATATAAATGCTCTTCTAGGTTTCATAATCGGTATGGCTGGATGGTTATACATTCTTTATGAAGTATTCTCAGGAGAAGCTGGTAAAGCAGCAGCTAAAAGTGGCAACAAAGGTCTTGCTACTGCGTTTAGCGCAATGAGAATGATCGTAACAATTGGTTGGGCGATATATCCA RYIDWLITVPLQMIEFYLILAAVRKVPGGIFWRLLIGSLVMLIGGYLGEAGYINALLGFIIGMAGWLYILYEVFSGEAGKAAAKSGNKGLATAFSAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATCACTGTTCCATTACAGATGATTGAATTCTATTTAATTCTTGCAGCT---------GTA---AGAAAAGTTCCTGGT---GGAATT------------------------------------TTCTGGAGA---CTGTTAATCGGATCTTTAGTTATGTTGATCGGTGGATATTTAGGAGAA---------GCA------------------GGT------TAT---------------------------------ATA------------------------------------------------------------------AATGCT------------------CTTCTAGGT---TTCATAATCGGTATGGCTGGATGGTTATACATTCTTTATGAAGTA---------------TTC------TCA---GGAGAAGCTGGTAAAGCAGCAGCTAAA------AGT---GGCAACAAAGGTCTT---GCT---ACT---GCG---TTT---AGC---GCAATG---AGAATGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCGATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---V-RKVPG-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------LLG-FIIGMAGWLYILYEV-----F--S-GEAGKAAAK--S-GNKGL-A-T-A-F-S-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ203812 [IV-Alpha8-SAR11/IMCC9063] SS114a40C4_env_samples_DQ203812 gi|77548072|gb|DQ203812| Uncultured bacterium clone SS114a40C4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40C4 predicted proteorhodopsin gene, partial cds DQ203812 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATACATTGACTGGCTAATCACTGTTCCATTACAGATGATTGAATTCTATTTAATTCTTGCAGCTGTAAGAAAAGTTCCTGGTGGAATTTTCTGGAGACTGTTAATCGGATCTTTAGTTATGTTGATCGGTGGATATTTAGGAGAAGCAGGTTATATAAATGCTCTTCTAGGTTTCATAATCGGTATGGCTGGATGGTTATACATTCTTTATGAAGTATTCTCAGGAGAAGCTGGTAAAGCAGCGGCTAAAAGTGGTAACAAAGGTCTTGCTACTGCGTTTAGTGCAATGAGAATGATCGTAACAATTGGGTGGGCGATTTACCCA RYIDWLITVPLQMIEFYLILAAVRKVPGGIFWRLLIGSLVMLIGGYLGEAGYINALLGFIIGMAGWLYILYEVFSGEAGKAAAKSGNKGLATAFSAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATTGACTGG------------------------CTAATCACTGTTCCATTACAGATGATTGAATTCTATTTAATTCTTGCAGCT---------GTA---AGAAAAGTTCCTGGT---GGAATT------------------------------------TTCTGGAGA---CTGTTAATCGGATCTTTAGTTATGTTGATCGGTGGATATTTAGGAGAA---------GCA------------------GGT------TAT---------------------------------ATA------------------------------------------------------------------AATGCT------------------CTTCTAGGT---TTCATAATCGGTATGGCTGGATGGTTATACATTCTTTATGAAGTA---------------TTC------TCA---GGAGAAGCTGGTAAAGCAGCGGCTAAA------AGT---GGTAACAAAGGTCTT---GCT---ACT---GCG---TTT---AGT---GCAATG---AGAATGATCGTAACAATT---------------------------------------------------------------GGGTGG---------GCGATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---V-RKVPG-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------LLG-FIIGMAGWLYILYEV-----F--S-GEAGKAAAK--S-GNKGL-A-T-A-F-S-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EF100789 [IV-Alpha8-SAR11/IMCC9063] clone_ID29007_EF100789 gi|126513357|gb|EF100789| Uncultured bacterium clone ID29007 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID29007 putative proteorhodopsin gene, partial cds. EF100789 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-nov-07 #na surface water Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGGTGGCCGCTACTGCTTTCTTCTTCATGGAAAGAGGATCAGTTGCATCTGGTTGGAAAACTTCAGTAACAGTTGCAGGACTTGTAACTGGTATTGCTTTTATCCACTACATGTACATGAGAGGTGTATGGGTGCAAACAGGTGAGTCACCAACTGTATATAGATACATTGACTGGCTGATCACTGTACCACTACAGATGATTGAATTCTATTTAATTCTTGCAGCTGTAAGAAAAGTTCCTGGTGGAATTTTCTGGAGACTGTTAATCGGATCTTTAGTTATGTTGATCGGTGGATACTTAGGAGAAGCAGGTTATATCAATGCTCTTCTTGGTTTCATAATCGGTATGGCTGGATGGTTATACATTCTTTATGAAGTATTCTCTGGTGAAGCTGGAAAAGCAGCAGCTAAAAGTGGTAACAAAGGTTTGTCTACTGCATTTGGCGCGATGAGAATGATCGTAACAATCGGCTGGGCGATATACCCA MVAATAFFFMERGSVASGWKTSVTVAGLVTGIAFIHYMYMRGVWVQTGESPTVYRYIDWLITVPLQMIEFYLILAAVRKVPGGIFWRLLIGSLVMLIGGYLGEAGYINALLGFIIGMAGWLYILYEVFSGEAGKAAAKSGNKGLSTAFGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCTTTCTTCTTCATGGAAAGAGGATCAGTTGCATCT---GGTTGGAAAACTTCAGTAACAGTTGCAGGACTTGTAACTGGTATTGCTTTTATCCACTACATGTACATGAGAGGTGTATGGGTG------------------------------CAAACA---------------------GGTGAGTCACCAACTGTATATAGATACATTGACTGG------------------------CTGATCACTGTACCACTACAGATGATTGAATTCTATTTAATTCTTGCAGCT---------GTA---AGAAAAGTTCCTGGT---GGAATT------------------------------------TTCTGGAGA---CTGTTAATCGGATCTTTAGTTATGTTGATCGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------AATGCT------------------CTTCTTGGT---TTCATAATCGGTATGGCTGGATGGTTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCTGGAAAAGCAGCAGCTAAA------AGT---GGTAACAAAGGTTTG---TCT---ACT---GCA---TTT---GGC---GCGATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGCTGG---------GCGATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMERGSVAS-GWKTSVTVAGLVTGIAFIHYMYMRGVWV----------QT-------GESPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKVPG-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------LLG-FIIGMAGWLYILYEV-----F--S-GEAGKAAAK--S-GNKGL-S-T-A-F-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU079247 [IV-Alpha8-SAR11/IMCC9063] clone_B_Mtd1_013_EU079247 gi|156106653|gb|EU079247| Uncultured organism clone B Mtd1 013 putative proteorhodopsin gene, partial cds. Uncultured organism clone B Mtd1 013 putative proteorhodopsin gene, partial cds. EU079247 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; na light-energy conversion (ion transport) unknown [unclassified sequences/environmental samples] taxon:155900 genomic DNA other 27-FEB-2008 #na Sargasso Sea surface water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99-109 (2008) 18211270 #na GGATATTTAGGTGAAGCAGGTTACATCAATTCTATGCTTGGTTTTATAATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTATTTTCAGGTGAAGCTGGAAAAGCAGCAGCAAAAAGTGGTAACAAGGCTCTTGTAACTGCATTTGGTGCTATGAGAATGATCGTAACAATAGGTTGGGC GYLGEAGYINSMLGFIIGMAGWIYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTIGW ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGATATTTAGGTGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATTCT------------------ATGCTTGGT---TTTATAATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTA---------------TTT------TCA---GGTGAAGCTGGAAAAGCAGCAGCAAAA------AGT---GGTAACAAGGCTCTT---GTA---ACT---GCA---TTT---GGT---GCTATG---AGAATGATCGTAACAATA---------------------------------------------------------------GGTTGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GYLGE---A------G--Y-----------I----------------------NS------MLG-FIIGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTI---------------------GW--------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_1105141164488 [IV-Alpha8-SAR11/IMCC9063] JCVI_ORF_1105141164488_GS036_Coastal_3m jcvi|1105141164488| 1105141164488 JCVI ORF 1105141164488 1105141164488 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 02-mars-04 Coastal/3m_depth/S_34.6_psu/GS036/Cabo_Marshall/Isabella_Island/Galapagos_Islands Pacific Ocean marine -0.020833334 -91.19778 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAACTGTTTGCTCTTACAGCTGTTGCCCTAATGGGTGTTACAGGTGTAGCAAACGCTGAGACCGCGATGTTAGCTCAAGATGACTTTGTTGGAATTTCCTTTTGGGTAATTTCAATGGGTATGTTGGCTGCTACAGCATTCTTCTTCATGGAAAGAAGTACTGTTGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCATTCATCCACTACATGTACATGAGAGATGTATGGGTGAGTACAGGTGATTCACCAACAGTATACAGATACATTGACTGGTTAATTACTGTTCCATTACAGATGATAGAGTTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAATTCTGGAATTTTCTGGAGATTGTTAATTGGATCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTGTTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCTTCAAAAAGTGGAAACAAAGCTCTTGTAACCGCATTTGGTGCAATGAGAATGATCGTTACAGTAGGTTGGGCTATTTACCCATTAGGTTACGTATTTGGTTACTTAACAGGTGGTGTAGATGCTAACTCACTTAACGTTGTTTACAACTTAGCTGACTTTATAAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAGTTAGTTCAGCTGGTGCAAGAAGCAGA MKKLKLFALTAVALMGVTGVANAETAMLAQDDFVGISFWVISMGMLAATAFFFMERSTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVSTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEIFSGEAGKAASKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAAVSSAGARSR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAACTGTTTGCTCTTACAGCTGTTGCCCTAATGGGTGTTACAGGTGTAGCAAACGCTGAGACCGCG---ATGTTAGCTCAAGATGACTTTGTTGGAATTTCCTTTTGGGTAATTTCAATGGGTATGTTGGCTGCTACAGCATTCTTCTTCATGGAAAGAAGTACTGTTGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCATTCATCCACTACATGTACATGAGAGATGTATGGGTG------------------------------AGTACA---------------------GGTGATTCACCAACAGTATACAGATACATTGACTGG------------------------TTAATTACTGTTCCATTACAGATGATAGAGTTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAATTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGATCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTTCAAAA------AGT---GGAAACAAAGCTCTT---GTA---ACC---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTACGTATTTGGTTACTTA---------------------------------------ACAGGTGGTGTAGATGCTAACTCACTTAACGTTGTTTACAACTTAGCTGACTTTATAAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAGTTAGTTCA---GCTGGTGCAAGAAGCAGA--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALTAVALMGVTGVANAETA-MLAQDDFVGISFWVISMGMLAATAFFFMERSTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------ST-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEI-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAAVSS-AGARSR----------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422533 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-50m-h12_DQ422533 gi|90024586|gb|DQ422533| Uncultured bacterium clone med-tb04-50m-h12 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-h12 putative proteorhodopsin gene, partial cds. DQ422533 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTTCCATTACAGATGATAGAGTTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAATTCTGGAATTTTCTGGAGATTGTTAATTGGATCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTGTTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCTTCAAAAAGTGGAAACAAAGCTCTTGTAACCGCATTTGGTGCAATGAGAATGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEIFSGEAGKAASKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTTCCATTACAGATGATAGAGTTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAATTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGATCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTTCAAAA------AGT---GGAAACAAAGCTCTT---GTA---ACC---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEI-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_1105112701478 [IV-Alpha8-SAR11/IMCC9063] JCVI_ORF_1105112701478_GS032_Mangrove_1m jcvi|1105112701478| 1105112701478 JCVI ORF 1105112701478 1105112701478 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 11-FEB-2004 Mangrove/1m_depth/S_n.a/GS032/Mangrove_on_Isabella_Island/Galapagos_Islands Pacific Ocean marine -0.5938889 -91.06944 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAACTGTTTGCTCTTACAGCTGTAGCCCTAATCGGGATTACAGGTGTTGCAAACGCTGCGACCGCAATGTTAGCTCAAGATGACTTTGTTGGAATTTCCTTTTGGGTAATTTCAATGGGTATGTTGGCAGCTACAGCGTTTTTCTTTATGGAGAGAAACACTGTTGCACCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGATGTATGGGTGAGTACAGGTGATTCACCAACTGTATACAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAATTTTACTTAATTCTAGTAGCTGTAAGAAAAGCAAATTCTGGAATTTTCTGGAGATTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCTGCTAAGAGTGGTAATAAAAATCTAGCAACTGCATTCAGTGCAATGAGAATGATTGTAACTGTAGGTTGGGCAATTTACCCATTAGGTTATGTATTTGGTTACCTAACAGGTGGTGTAGATGCTAACACACTTAACGTGGTTTACAACTTAGCTGACTTTATAAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAGTTAGTTCAGCTGGTGCAAGAGCAAGA MKKLKLFALTAVALIGITGVANAATAMLAQDDFVGISFWVISMGMLAATAFFFMERNTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVSTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKNLATAFSAMRMIVTVGWAIYPLGYVFGYLTGGVDANTLNVVYNLADFINKIAFGLVIWAAAVSSAGARAR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAACTGTTTGCTCTTACAGCTGTAGCCCTAATCGGGATTACAGGTGTTGCAAACGCTGCGACCGCA---ATGTTAGCTCAAGATGACTTTGTTGGAATTTCCTTTTGGGTAATTTCAATGGGTATGTTGGCAGCTACAGCGTTTTTCTTTATGGAGAGAAACACTGTTGCACCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGATGTATGGGTG------------------------------AGTACA---------------------GGTGATTCACCAACTGTATACAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAATTTTACTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAATTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGTAATAAAAATCTA---GCA---ACT---GCA---TTC---AGT---GCAATG---AGAATGATTGTAACTGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCATTAGGTTATGTATTTGGTTACCTA---------------------------------------ACAGGTGGTGTAGATGCTAACACACTTAACGTGGTTTACAACTTAGCTGACTTTATAAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAGTTAGTTCA---GCTGGTGCAAGAGCAAGA--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALTAVALIGITGVANAATA-MLAQDDFVGISFWVISMGMLAATAFFFMERNTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------ST-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKNL-A-T-A-F-S-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANTLNVVYNLADFINKIAFGLVIWAAAVSS-AGARAR----------------------------------- [IV-Alpha8-SAR11/IMCC9063]_1105146586986 [IV-Alpha8-SAR11/IMCC9063] JCVI_ORF_1105146586986 jcvi|1105146586986| 1105146586986 JCVI ORF 1105146586986 1105146586986 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 11-FEB-2004 Mangrove/1m_depth/S_n.a/GS032/Mangrove_on_Isabella_Island/Galapagos_Islands Pacific Ocean marine -0.5938889 -91.06944 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAACTGTTTGCACTTACAGCTGTAGCCCTAATCGGGATCACAGGTGTTGCAAACGCTGCGACCGCAATGTTAGCTCAAGATGACTTTGTTGGAATTTCCTTTTGGGTAATTTCAATGGGTATGTTGGCAGCTACAGCGTTTTTCTTCATGGAGAGAAACACTGTTGCACCTGGCTGGAAAACGTCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGATGTATGGGTAAGTACTGGAGATTCACCAACAGTATACAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAATTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAATTCTGGAATTTTCTGGAGATTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCTCTTGTAACTGCATTCAGTGCAATGAGAATGATTGTAACTGTAGGTTGGGCAATTTACCCATTATGTTATGTATTTGGTTACCTAACAGGTGGTGTAGATGCTAATTCACTTAACGTGGTTTACAACTTAGCTGACTTTATAAACAAAATTGCATTTGGTCTAGTAATC MKKLKLFALTAVALIGITGVANAATAMLAQDDFVGISFWVISMGMLAATAFFFMERNTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVSTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFSAMRMIVTVGWAIYPLCYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAACTGTTTGCACTTACAGCTGTAGCCCTAATCGGGATCACAGGTGTTGCAAACGCTGCGACCGCA---ATGTTAGCTCAAGATGACTTTGTTGGAATTTCCTTTTGGGTAATTTCAATGGGTATGTTGGCAGCTACAGCGTTTTTCTTCATGGAGAGAAACACTGTTGCACCT---GGCTGGAAAACGTCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGATGTATGGGTA------------------------------AGTACT---------------------GGAGATTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAATTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAATTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCTCTT---GTA---ACT---GCA---TTC---AGT---GCAATG---AGAATGATTGTAACTGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCATTATGTTATGTATTTGGTTACCTA---------------------------------------ACAGGTGGTGTAGATGCTAATTCACTTAACGTGGTTTACAACTTAGCTGACTTTATAAACAAAATTGCATTTGGTCTAGTAATC--------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALTAVALIGITGVANAATA-MLAQDDFVGISFWVISMGMLAATAFFFMERNTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------ST-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-S-AM-RMIVTV---------------------GW---AIYPLCYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVI------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_JX863274 [IV-Alpha8-SAR11/IMCC9063] MALINA_OTU19_082_L_env_samples_JX863274 gi|425477498|gb|JX863274| Uncultured bacterium clone MALINA OTU19 082 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU19 082 L putative proteorhodopsin mRNA, partial cds JX863274 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 09Aug2009 3m_depth Arctic Ocean marine 71.57 -133.94 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATCACTGTACCATTACTGATGATAGAATTTTATCTTGTTCTAGCAGCAGTAGGTAAAGCAAATTCTGGAATATTCTGGAGATTGTTAATTGGAACAATTGTGATGCTACTTGGTGGATACTTTGGAGAAGCAGGATACATTAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTTTCAGGTGAAGCAGGTAAAGCTGCAGCAAAAAGTGGAAACAAAGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTT WLITVPLLMIEFYLVLAAVGKANSGIFWRLLIGTIVMLLGGYFGEAGYINATLGFVIGMAGWFYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATCACTGTACCATTACTGATGATAGAATTTTATCTTGTTCTAGCAGCA---------GTA---GGTAAAGCAAATTCT---GGAATA------------------------------------TTCTGGAGA---TTGTTAATTGGAACAATTGTGATGCTACTTGGTGGATACTTTGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTT------TCA---GGTGAAGCAGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFYLVLAA---V-GKANS-GI------------FWR-LLIGTIVMLLGGYFGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_JX863269 [IV-Alpha8-SAR11/IMCC9063] MALINA_OTU19_308_L_env_samples_JX863269 gi|425477488|gb|JX863269| Uncultured bacterium clone MALINA OTU19 308 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU19 308 L putative proteorhodopsin mRNA, partial cds JX863269 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 02Aug2009 40m_depth Arctic Ocean marine 69.61 -138.23 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATCACTGTACCATTACTGATGATAGAATTCTATCTTGTTCTAGCAGCAGTAGGTAAAGCAAATTCTGGAATATTCTGGAGATTGTTAATTGGAACAGTTGTGATGCTTTTAGGTGGATACCTAGGAGAAGCAGGATACATTAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGAAAAGCTGCGGCAAAAAGTGGAAACAAAGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTT WLITVPLLMIEFYLVLAAVGKANSGIFWRLLIGTVVMLLGGYLGEAGYINATLGFVIGMAGWFYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATCACTGTACCATTACTGATGATAGAATTCTATCTTGTTCTAGCAGCA---------GTA---GGTAAAGCAAATTCT---GGAATA------------------------------------TTCTGGAGA---TTGTTAATTGGAACAGTTGTGATGCTTTTAGGTGGATACCTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGAAAAGCTGCGGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFYLVLAA---V-GKANS-GI------------FWR-LLIGTVVMLLGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_JX863277 [IV-Alpha8-SAR11/IMCC9063] MALINA_OTU19_268_L_env_samples_JX863277 gi|425477504|gb|JX863277| Uncultured bacterium clone MALINA OTU19 268 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU19 268 L putative proteorhodopsin mRNA, partial cds JX863277 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 11Aug2009 3m_depth Arctic Ocean marine 70.68 -139.62 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATCACTGTGCCATTACTGATGATAGAATTTTATCTTGTTCTAGCAGCAGTAGGTAAAGCAAATTCTGGAATATTCTGGAGATTGTTAATTGGAACAGTTGTGATGCTTGTAGGTGGATACTTAGGAGAAGCAGGATACATTAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGAAAAGCTGCAGCAAAAAGTGGAAACAAAGCTCTTGTTACTGCATTTGGCGCAATGAGAATGATCGTTACAGTT WLITVPLLMIEFYLVLAAVGKANSGIFWRLLIGTVVMLVGGYLGEAGYINATLGFVIGMAGWFYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATCACTGTGCCATTACTGATGATAGAATTTTATCTTGTTCTAGCAGCA---------GTA---GGTAAAGCAAATTCT---GGAATA------------------------------------TTCTGGAGA---TTGTTAATTGGAACAGTTGTGATGCTTGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGAAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGC---GCAATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFYLVLAA---V-GKANS-GI------------FWR-LLIGTVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_JX863182 [IV-Alpha8-SAR11/IMCC9063] MALINA_OTU19_213_L_env_samples_JX863182 gi|425477314|gb|JX863182| Uncultured bacterium clone MALINA OTU19 213 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU19 213 L putative proteorhodopsin gene, partial cds JX863182 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 11Aug2009 3m_depth Arctic Ocean marine 70.68 -139.62 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATCACTGTGCCATTACTGATGACAGAATTTTATCTTGTTCTAGCAGCAGTAGGTAAAGCAAATTCTGGAATATTCTGGAGATTGTTAATTGGAACAGTTGTGATGCTTGTAGGTGGATACTTAGGAGAAGCAGGATACATTAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGAAAAGCTGCAGCAAAAAGTGGAAACAAAGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTT WLITVPLLMTEFYLVLAAVGKANSGIFWRLLIGTVVMLVGGYLGEAGYINATLGFVIGMAGWFYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATCACTGTGCCATTACTGATGACAGAATTTTATCTTGTTCTAGCAGCA---------GTA---GGTAAAGCAAATTCT---GGAATA------------------------------------TTCTGGAGA---TTGTTAATTGGAACAGTTGTGATGCTTGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGAAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMTEFYLVLAA---V-GKANS-GI------------FWR-LLIGTVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_JX863181 [IV-Alpha8-SAR11/IMCC9063] MALINA_OTU19_197_L_env_samples_JX863181 gi|425477312|gb|JX863181| Uncultured bacterium clone MALINA OTU19 197 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU19 197 L putative proteorhodopsin gene, partial cds JX863181 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 02Aug2009 45m_depth Arctic Ocean marine 69.61 -138.23 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATCACTGTGCCATTACTAATGATAGAATTTTACCTTGTTCTAGCGGCGGTAGGAAAAGCAAATTCTGGAATATTCTGGAGATTGTTAATTGGATCAGTTGTAATGCTTGTAGGTGGATACTTAGGAGAATCGGGATACATTAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGAAAAGCTGCAGCAAAAAGTGGAAACAAAGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTT WLITVPLLMIEFYLVLAAVGKANSGIFWRLLIGSVVMLVGGYLGESGYINATLGFVIGMAGWFYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATCACTGTGCCATTACTAATGATAGAATTTTACCTTGTTCTAGCGGCG---------GTA---GGAAAAGCAAATTCT---GGAATA------------------------------------TTCTGGAGA---TTGTTAATTGGATCAGTTGTAATGCTTGTAGGTGGATACTTAGGAGAA---------TCG------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGAAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFYLVLAA---V-GKANS-GI------------FWR-LLIGSVVMLVGGYLGE---S------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_JX863283 [IV-Alpha8-SAR11/IMCC9063] MALINA_OTU19_290_L_env_samples_JX863283 gi|425477516|gb|JX863283| Uncultured bacterium clone MALINA OTU19 290 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU19 290 L putative proteorhodopsin mRNA, partial cds JX863283 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 02Aug2009 40m_depth Arctic Ocean marine 69.61 -138.23 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATCACTGTGCCATTACTAATGATAGAATTTTACCTTGTTCTAGCGGCGGTAGGAAAAGCAAATTCTGGAATATTCTGGAGATTGTTAATTGGAACAGTTGTAATGCTTTTAGGTGGATACTTAGGAGAATCGGGATACATTAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGAAAAGCTGCAGCAAAAAGTGGAAACAAAGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTT WLITVPLLMIEFYLVLAAVGKANSGIFWRLLIGTVVMLLGGYLGESGYINATLGFVIGMAGWFYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATCACTGTGCCATTACTAATGATAGAATTTTACCTTGTTCTAGCGGCG---------GTA---GGAAAAGCAAATTCT---GGAATA------------------------------------TTCTGGAGA---TTGTTAATTGGAACAGTTGTAATGCTTTTAGGTGGATACTTAGGAGAA---------TCG------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGAAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFYLVLAA---V-GKANS-GI------------FWR-LLIGTVVMLLGGYLGE---S------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_JX863278 [IV-Alpha8-SAR11/IMCC9063] MALINA_OTU19_252_L_env_samples_JX863278 gi|425477506|gb|JX863278| Uncultured bacterium clone MALINA OTU19 252 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU19 252 L putative proteorhodopsin mRNA, partial cds JX863278 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 11Aug2009 3m_depth Arctic Ocean marine 70.68 -139.62 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATCACTGTGCCATTACTAATGATAGAATTTTACCTAATTCTAGCAGCAGTAGGCAAAGCAAATTCTGGAATATTCTGGAGATTGTTAATTGGAACAGTTGTGATGCTTGTAGGTGGATACTTAGGAGAAGCAGGATACATTAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATCCTCTGGTGAAGCAGGAAAAGCTGCAGCAAAAAGTGGAAACAAAGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTT WLITVPLLMIEFYLILAAVGKANSGIFWRLLIGTVVMLVGGYLGEAGYINATLGFVIGMAGWFYILYEVSSGEAGKAAAKSGNKALVTAFGAMRMIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATCACTGTGCCATTACTAATGATAGAATTTTACCTAATTCTAGCAGCA---------GTA---GGCAAAGCAAATTCT---GGAATA------------------------------------TTCTGGAGA---TTGTTAATTGGAACAGTTGTGATGCTTGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TCC------TCT---GGTGAAGCAGGAAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFYLILAA---V-GKANS-GI------------FWR-LLIGTVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----S--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_1105101984714 [IV-Alpha8-SAR11/IMCC9063] JCVI_ORF_1105101984714_GS006_Estuary_1m jcvi|1105101984714| 1105101984714 JCVI ORF 1105101984714 1105101984714 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 23-AUG-2003 Estuary/1m_depth/S_n.a/GS006/Bay_of_Fundy/Nova_Scotia/North_American_East_Coast Atlantic Ocean marine 45.111668 -64.94666 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAGGGAGTTTTTTATGAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCCTAATGGGTGCTTCAGGTGTAGCAAACGCAGAAACAGCCATGTTGGCTTCTGACGACTTCGTTGGGATTTCATTCTGGCTAGTAACAATGGTGATGTTAGCGTCTACTGCTTTCTTTTTCTTAGAAGCAGGAAATGTTGCAGCAGGTTGGAGAACATCAATAATTGTAGCTGGTCTAGTTACTGGTATTGCATTCATCCATTACATGTACATGAGAGATGTATGGGTAACAACTGGTGAGTCACCAACTGTTTACAGATATATTGACTGGTTAATCACTGTACCATTACTGATGATAGAATTTTACCTAATTCTAGCAGCTGTAGGAAAAGCAAATTCTGGAATATTCTGGAGATTGTTAATTGGAACAGTTGTGATGCTTGTAGGTGGATACTTAGGAGAAGCAGGATACATTAACGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGAAAAGCTGCAGCAAAAAGTGGAAACAAAGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTTGGTTGGGCAATTTACCCATTAGGTTACGTATTTGGTTACCTAACAGGTGGTGTAGATGCTGACTCACTAAACGTGATTTACAACATAGCTGACTTGCTAAACAAAACTGCATTTGGTCTAATCATTTGGGCTGCAGCAATGCAATCAGGTGGTAGAAAAGCTAAG MREFFMKKLKLFALTAVALMGASGVANAETAMLASDDFVGISFWLVTMVMLASTAFFFLEAGNVAAGWRTSIIVAGLVTGIAFIHYMYMRDVWVTTGESPTVYRYIDWLITVPLLMIEFYLILAAVGKANSGIFWRLLIGTVVMLVGGYLGEAGYINATLGFVIGMAGWFYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDADSLNVIYNIADLLNKTAFGLIIWAAAMQSGGRKAK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAGGGAGTTTTTTATGAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCCTAATGGGTGCTTCAGGTGTAGCAAACGCAGAAACAGCC---ATGTTGGCTTCTGACGACTTCGTTGGGATTTCATTCTGGCTAGTAACAATGGTGATGTTAGCGTCTACTGCTTTCTTTTTCTTAGAAGCAGGAAATGTTGCAGCA---GGTTGGAGAACATCAATAATTGTAGCTGGTCTAGTTACTGGTATTGCATTCATCCATTACATGTACATGAGAGATGTATGGGTA------------------------------ACAACT---------------------GGTGAGTCACCAACTGTTTACAGATATATTGACTGG------------------------TTAATCACTGTACCATTACTGATGATAGAATTTTACCTAATTCTAGCAGCT---------GTA---GGAAAAGCAAATTCT---GGAATA------------------------------------TTCTGGAGA---TTGTTAATTGGAACAGTTGTGATGCTTGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGAAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCAATTTACCCATTAGGTTACGTATTTGGTTACCTA---------------------------------------ACAGGTGGTGTAGATGCTGACTCACTAAACGTGATTTACAACATAGCTGACTTGCTAAACAAAACTGCATTTGGTCTAATCATTTGGGCTGCAGCAATGCAATCA---GGTGGTAGAAAAGCTAAG--------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------MREFFMKKLKLFALTAVALMGASGVANAETA-MLASDDFVGISFWLVTMVMLASTAFFFLEAGNVAA-GWRTSIIVAGLVTGIAFIHYMYMRDVWV----------TT-------GESPTVYRYIDW--------LITVPLLMIEFYLILAA---V-GKANS-GI------------FWR-LLIGTVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDADSLNVIYNIADLLNKTAFGLIIWAAAMQS-GGRKAK----------------------------------- [IV-Alpha8-SAR11/IMCC9063]_FJ618961 [IV-Alpha8-SAR11/IMCC9063] PR_108_08_17_env_samples_FJ618961 gi|223046805|gb|FJ618961| Uncultured bacterium clone PR 108 08 17 proteorhodopsin gene, partial cds Uncultured bacterium clone PR 108 08 17 proteorhodopsin gene, partial cds FJ618961 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-juil-09 #na Arctic_Ocean Arctic Ocean marine 71.37 -156.68 Photoheterotrophic microbes in the Arctic Ocean in summer and winter Cottrell,M.T. and Kirchman,D.L. Appl. Environ. Microbiol. 75 (15), 49584966 (2009) 19502441 #na TACGTTGATTGGTTAATCACTGTACCATTACTGATGATAGAATTTCACCTAATTCTAGCAGCTGTAGGAAAAGCAAATTCTGGAATATTCTGGAGATTGTTAATTGGAACAGTTGTGATGCTTGTAGGTGGATACTTAGGAGAAGCAGGATACATCAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGAAAAGCTGCAGCAAAAAGTGGAAACAAAGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTTGGATGGGCAATATAC YVDWLITVPLLMIEFHLILAAVGKANSGIFWRLLIGTVVMLVGGYLGEAGYINATLGFVIGMAGWFYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACGTTGATTGG------------------------TTAATCACTGTACCATTACTGATGATAGAATTTCACCTAATTCTAGCAGCT---------GTA---GGAAAAGCAAATTCT---GGAATA------------------------------------TTCTGGAGA---TTGTTAATTGGAACAGTTGTGATGCTTGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGAAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT---------------------------------------------------------------GGATGG---------GCAATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LITVPLLMIEFHLILAA---V-GKANS-GI------------FWR-LLIGTVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_JX863270 [IV-Alpha8-SAR11/IMCC9063] MALINA_OTU19_315_L_env_samples_JX863270 gi|425477490|gb|JX863270| Uncultured bacterium clone MALINA OTU19 315 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU19 315 L putative proteorhodopsin mRNA, partial cds JX863270 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 02Aug2009 40m_depth Arctic Ocean marine 69.61 -138.23 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATCACTGTACCATTACTGATGATAGAATTTTACCTAATTCTAGCAGCTGTAGGAAAAGCAAATTCTGGAATATTCTGGAGATTGTTAATTGGAACAGTTGTGATGCTTGTAGGTGGATACTTAGGAGAAGCAGGATACATTAACGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGAAAAGCTGCAGCAAAAAGTGGAAACAAAGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTT WLITVPLLMIEFYLILAAVGKANSGIFWRLLIGTVVMLVGGYLGEAGYINATLGFVIGMAGWFYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATCACTGTACCATTACTGATGATAGAATTTTACCTAATTCTAGCAGCT---------GTA---GGAAAAGCAAATTCT---GGAATA------------------------------------TTCTGGAGA---TTGTTAATTGGAACAGTTGTGATGCTTGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGAAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFYLILAA---V-GKANS-GI------------FWR-LLIGTVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_JX863279 [IV-Alpha8-SAR11/IMCC9063] MALINA_OTU19_258_L_env_samples_JX863279 gi|425477508|gb|JX863279| Uncultured bacterium clone MALINA OTU19 258 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU19 258 L putative proteorhodopsin mRNA, partial cds JX863279 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 11Aug2009 3m_depth Arctic Ocean marine 70.68 -139.62 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATCACTGTACCATTACTGATGATAGAATTTTACCTAATTCTAGCAGCTGTAGGAAAAGCAAATTCTGGAATATTCTGGAGATTGTTAATTGGAACAGTTGCGATGCTTGTAGGTGGATACTTAGGAGAAGCAGGATACATTAACGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCTGGTGAAGCGGGAAAAGCTGCAGCAAAAAGTGGAAACAAAGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTT WLITVPLLMIEFYLILAAVGKANSGIFWRLLIGTVAMLVGGYLGEAGYINATLGFVIGMAGWFYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATCACTGTACCATTACTGATGATAGAATTTTACCTAATTCTAGCAGCT---------GTA---GGAAAAGCAAATTCT---GGAATA------------------------------------TTCTGGAGA---TTGTTAATTGGAACAGTTGCGATGCTTGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCGGGAAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFYLILAA---V-GKANS-GI------------FWR-LLIGTVAMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_JX863275 [IV-Alpha8-SAR11/IMCC9063] MALINA_OTU19_241_Q_env_samples_JX863275 gi|425477500|gb|JX863275| Uncultured bacterium clone MALINA OTU19 241 Q putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU19 241 Q putative proteorhodopsin mRNA, partial cds JX863275 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 11Aug2009 3m_depth Arctic Ocean marine 70.68 -139.62 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATCACTGTACCATTACAAATGATAGAATTTTATTTAATTCTAGCTGCTGTAGGAAAAGCAAATGCTGGAATATTCTGGAGATTGTTAATTGGTACTGTAGTAACGCTACTTGGTGGATATTTAGGAGAAGCAGGATACATTAACGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGGCTGCAGCAAAAAGTGGTAACAAAGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATTATTACAGTA WLITVPLQMIEFYLILAAVGKANAGIFWRLLIGTVVTLLGGYLGEAGYINATLGFVIGMAGWFYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIITV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATCACTGTACCATTACAAATGATAGAATTTTATTTAATTCTAGCTGCT---------GTA---GGAAAAGCAAATGCT---GGAATA------------------------------------TTCTGGAGA---TTGTTAATTGGTACTGTAGTAACGCTACTTGGTGGATATTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGGCTGCAGCAAAA------AGT---GGTAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATTATTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLQMIEFYLILAA---V-GKANA-GI------------FWR-LLIGTVVTLLGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIITV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_JX863282 [IV-Alpha8-SAR11/IMCC9063] MALINA_OTU19_274_Q_env_samples_JX863282 gi|425477514|gb|JX863282| Uncultured bacterium clone MALINA OTU19 274 Q putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU19 274 Q putative proteorhodopsin mRNA, partial cds JX863282 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 11Aug2009 3m_depth Arctic Ocean marine 70.68 -139.62 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATCACTGTACCATTACAAATGATAGAATTTTACTTTATTCTAGCTGCTGTAGGAAAAGCAAATGCTGGAATATTCTGGAGATTGTTAATTGGTACTGTAGTAATGCTACTTGGTGGATATTTAGGAGAAGCAGGATACATTAACGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGGCTGCAGCAAAAAGTGGTAACAAAGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATTATTACAGTA WLITVPLQMIEFYFILAAVGKANAGIFWRLLIGTVVMLLGGYLGEAGYINATLGFVIGMAGWFYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIITV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATCACTGTACCATTACAAATGATAGAATTTTACTTTATTCTAGCTGCT---------GTA---GGAAAAGCAAATGCT---GGAATA------------------------------------TTCTGGAGA---TTGTTAATTGGTACTGTAGTAATGCTACTTGGTGGATATTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGGCTGCAGCAAAA------AGT---GGTAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATTATTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLQMIEFYFILAA---V-GKANA-GI------------FWR-LLIGTVVMLLGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIITV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_JX863276 [IV-Alpha8-SAR11/IMCC9063] MALINA_OTU19_295_Q_env_samples_JX863276 gi|425477502|gb|JX863276| Uncultured bacterium clone MALINA OTU19 295 Q putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU19 295 Q putative proteorhodopsin mRNA, partial cds JX863276 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 02Aug2009 40m_depth Arctic Ocean marine 69.61 -138.23 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATCACTGTACCATTACAAATGATAGAATTTTATTTAATTCTAGCTGCTGTAGGAAAAGCAAATGCTGGAATATTCTGGAGATTGTTAATTGGTACTGTAGTAATGCTACTTGGTGGATATTTAGGAGAAGCAGGATACATTAACGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGGCTGCAGCAAAAAGTGGTAATAAAGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATTATTACAGTA WLITVPLQMIEFYLILAAVGKANAGIFWRLLIGTVVMLLGGYLGEAGYINATLGFVIGMAGWFYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIITV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATCACTGTACCATTACAAATGATAGAATTTTATTTAATTCTAGCTGCT---------GTA---GGAAAAGCAAATGCT---GGAATA------------------------------------TTCTGGAGA---TTGTTAATTGGTACTGTAGTAATGCTACTTGGTGGATATTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGGCTGCAGCAAAA------AGT---GGTAATAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATTATTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLQMIEFYLILAA---V-GKANA-GI------------FWR-LLIGTVVMLLGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIITV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_JX863271 [IV-Alpha8-SAR11/IMCC9063] MALINA_OTU19_013_Q_env_samples_JX863271 gi|425477492|gb|JX863271| Uncultured bacterium clone MALINA OTU19 013 Q putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU19 013 Q putative proteorhodopsin mRNA, partial cds JX863271 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 07Aug2009 20m_depth Arctic Ocean marine 70.91 -128.92 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATCACTGTACCATTACAAATGATAGAATTTTATTTAATTCTAGCTGCTGTAGGTAAAGCAAATTCTGGAATATTCTGGAGATTGTTAATTGGTACTGTTGTAATGCTACTTGGTGGATACTTAGGAGAAGCAGGATACATTAACGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAGCTGCAGCGAAAAGTGGTAACAAAGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATTATTACAGTA WLITVPLQMIEFYLILAAVGKANSGIFWRLLIGTVVMLLGGYLGEAGYINATLGFVIGMAGWFYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIITV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATCACTGTACCATTACAAATGATAGAATTTTATTTAATTCTAGCTGCT---------GTA---GGTAAAGCAAATTCT---GGAATA------------------------------------TTCTGGAGA---TTGTTAATTGGTACTGTTGTAATGCTACTTGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAGCTGCAGCGAAA------AGT---GGTAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATTATTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLQMIEFYLILAA---V-GKANS-GI------------FWR-LLIGTVVMLLGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIITV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_JX863273 [IV-Alpha8-SAR11/IMCC9063] MALINA_OTU19_057_Q_env_samples_JX863273 gi|425477496|gb|JX863273| Uncultured bacterium clone MALINA OTU19 057 Q putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU19 057 Q putative proteorhodopsin mRNA, partial cds JX863273 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 07Aug2009 5m_depth Arctic Ocean marine 70.91 -128.92 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATCACTGTACCATTACAAATGATAGAATTTTATTTAATTCTAGCTGCTGTAGGTAAAGCAAATTCTGGAATATTCTGGAGATTGTTAATTGGTACTGTTGTAATGCTACTTGGTGGATACTTAGGAGAAGCAGGATACATTAACGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAGCTGCAGCGAAAAGTGGTAACAAAGCTCTTATTACTGCATTTGGTGCAATGAGAATGATTATTACAGTA WLITVPLQMIEFYLILAAVGKANSGIFWRLLIGTVVMLLGGYLGEAGYINATLGFVIGMAGWFYILYEVFSGEAGKAAAKSGNKALITAFGAMRMIITV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATCACTGTACCATTACAAATGATAGAATTTTATTTAATTCTAGCTGCT---------GTA---GGTAAAGCAAATTCT---GGAATA------------------------------------TTCTGGAGA---TTGTTAATTGGTACTGTTGTAATGCTACTTGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAGCTGCAGCGAAA------AGT---GGTAACAAAGCTCTT---ATT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATTATTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLQMIEFYLILAA---V-GKANS-GI------------FWR-LLIGTVVMLLGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKAL-I-T-A-F-G-AM-RMIITV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_JX863272 [IV-Alpha8-SAR11/IMCC9063] MALINA_OTU19_038_Q_env_samples_JX863272 gi|425477494|gb|JX863272| Uncultured bacterium clone MALINA OTU19 038 Q putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU19 038 Q putative proteorhodopsin mRNA, partial cds JX863272 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 07Aug2009 20m_depth Arctic Ocean marine 70.91 -128.92 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATCACTGTACCATTACAAATGATAGAATTTTATTTAATTCTAGCTGCTGTAGGTAAAGCAAATTCTGGAATATTCTGGAGATTGTTAATTGGTACTGTTGTAATGCTACTTGGTGGATACTTAGGAGAAGCAGGATACATTAACGCTACACTTGGTTTTGTAATCGGTATGGCTGGATTGTTCTACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAGCTGCAGCGAAAAGTGGTAACAAAGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATTATTACAGTA WLITVPLQMIEFYLILAAVGKANSGIFWRLLIGTVVMLLGGYLGEAGYINATLGFVIGMAGLFYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIITV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATCACTGTACCATTACAAATGATAGAATTTTATTTAATTCTAGCTGCT---------GTA---GGTAAAGCAAATTCT---GGAATA------------------------------------TTCTGGAGA---TTGTTAATTGGTACTGTTGTAATGCTACTTGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATTGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAGCTGCAGCGAAA------AGT---GGTAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATTATTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLQMIEFYLILAA---V-GKANS-GI------------FWR-LLIGTVVMLLGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGLFYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIITV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_JX863284 [IV-Alpha8-SAR11/IMCC9063] MALINA_OTU19_360_Q_env_samples_JX863284 gi|425477518|gb|JX863284| Uncultured bacterium clone MALINA OTU19 360 Q putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU19 360 Q putative proteorhodopsin mRNA, partial cds JX863284 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 02Aug2009 3m_depth Arctic Ocean marine 69.61 -138.23 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATCACTGTACCATTACAAATGATAGAATTTTATTTAATTCTAGCTGCTGTAGGAAAGGCAAATGCTGGAATATTCTGGAGATTGTTAATTGGTACTGTGGTAATGCTACTTGGTGGATATTTAGGAGAAGCAGGATACATTAACGCTACACTTGGTTCTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGAAAAGCTGCAGCAAAAAGTGGAAACAAAGCTCTTGTTACTGCATTTGGTGCAATGAGAATAATTATTACAGTA WLITVPLQMIEFYLILAAVGKANAGIFWRLLIGTVVMLLGGYLGEAGYINATLGSVIGMAGWFYILYEVFSGEAGKAAAKSGNKALVTAFGAMRIIITV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATCACTGTACCATTACAAATGATAGAATTTTATTTAATTCTAGCTGCT---------GTA---GGAAAGGCAAATGCT---GGAATA------------------------------------TTCTGGAGA---TTGTTAATTGGTACTGTGGTAATGCTACTTGGTGGATATTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTTGGT---TCTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGAAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATAATTATTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLQMIEFYLILAA---V-GKANA-GI------------FWR-LLIGTVVMLLGGYLGE---A------G--Y-----------I----------------------NA------TLG-SVIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RIIITV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_JX863280 [IV-Alpha8-SAR11/IMCC9063] MALINA_OTU19_306_Q_env_samples_JX863280 gi|425477510|gb|JX863280| Uncultured bacterium clone MALINA OTU19 306 Q putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU19 306 Q putative proteorhodopsin mRNA, partial cds JX863280 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 02Aug2009 40m_depth Arctic Ocean marine 69.61 -138.23 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATAACAGTTCCATTACAGATGATAGAATTTTTCTTAATTCTAACAGCTGTAGGTAAAGCAAATTCTGGAATATTCTGGAGATTGTTAATTGGTTCAGTTGTAATGCTAGTTGGTGGATACTTAGGAGAAGCAGGATACATTAACGCTACACTTGGTTTTGTTATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTTTCAGGTGAAGCAGGAAAAGCTGCGGCAAAAAGTGGAAACAAAGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTA WLITVPLQMIEFFLILTAVGKANSGIFWRLLIGSVVMLVGGYLGEAGYINATLGFVIGMAGWFYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATAACAGTTCCATTACAGATGATAGAATTTTTCTTAATTCTAACAGCT---------GTA---GGTAAAGCAAATTCT---GGAATA------------------------------------TTCTGGAGA---TTGTTAATTGGTTCAGTTGTAATGCTAGTTGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTTATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTT------TCA---GGTGAAGCAGGAAAAGCTGCGGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLQMIEFFLILTA---V-GKANS-GI------------FWR-LLIGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ903146 [IV-Alpha8-SAR11/IMCC9063] clone_A1S0115_DQ903146 gi|116294021|gb|DQ903146| Uncultured bacterium clone A1S0115 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A1S0115 putative proteorhodopsin gene, partial cds. DQ903146 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na South China Sea surface water (SCS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na ATGGTCGCCGCTACTGTTTTCTTCTTTTTAGAAAGAGGATCTGTTGCACAAGGATGGAAAACTTCGGTAACTGTAGCTGGTTTGGTAACTGGTATTGCATTTATACACTACATGTACATGAGAGGTGTATGGGTACAAACCGGAGAATCACCAACAGTTTATAGATATATAGACTGGTTAATTACAGTTCCATTACAGATGGTAGAATTCTATTTAATTCTAGTAGCTGTAGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGATCATTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCAGGTTACATCAATGCTATGCTTGGATTTATTATAGGTATGGCTGGATGGATTTACATCTTGTATGAAGTATTTTCTGGTGAAGCAGGTAAAGCTGCTGCTAAAAGTGGTAACAAGGCTCTTGTAACTGCATTTAGTGCAATGAGAATGATGCGTAACAGTAGGCTGGGCGATTTACCCA MVAATVFFFLERGSVAQGWKTSVTVAGLVTGIAFIHYMYMRGVWVQTGESPTVYRYIDWLITVPLQMVEFYLILVAVGKANSGMFWRLLIGSLVMLIGGYLGEAGYINAMLGFIIGMAGWIYILYEVFSGEAGKAAAKSGNKALVTAFSAMRMMRNSRLGDLP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCCGCTACTGTTTTCTTCTTTTTAGAAAGAGGATCTGTTGCACAA---GGATGGAAAACTTCGGTAACTGTAGCTGGTTTGGTAACTGGTATTGCATTTATACACTACATGTACATGAGAGGTGTATGGGTA------------------------------CAAACC---------------------GGAGAATCACCAACAGTTTATAGATATATAGACTGG------------------------TTAATTACAGTTCCATTACAGATGGTAGAATTCTATTTAATTCTAGTAGCT---------GTA---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGATCATTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ATGCTTGGA---TTTATTATAGGTATGGCTGGATGGATTTACATCTTGTATGAAGTA---------------TTT------TCT---GGTGAAGCAGGTAAAGCTGCTGCTAAA------AGT---GGTAACAAGGCTCTT---GTA---ACT---GCA---TTT---AGT---GCAATG---AGAATGATGCGTAACAGT---------------------------------------------------------------AGGCTG---------GGCGATTTACCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERGSVAQ-GWKTSVTVAGLVTGIAFIHYMYMRGVWV----------QT-------GESPTVYRYIDW--------LITVPLQMVEFYLILVA---V-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-S-AM-RMMRNS---------------------RL---GDLP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_JX863281 [IV-Alpha8-SAR11/IMCC9063] MALINA_OTU19_271_L_env_samples_JX863281 gi|425477512|gb|JX863281| Uncultured bacterium clone MALINA OTU19 271 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU19 271 L putative proteorhodopsin mRNA, partial cds JX863281 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 11Aug2009 3m_depth Arctic Ocean marine 70.68 -139.62 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATCACTGTACCATTACTGATGGTAGAATTTTACTTAATTCTAGCAGCTGTAGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATTGGTTCAGTTGTAATGCTAGTTGGAGGATATTTAGGAGAAGCGGGATACATCAATGAAATGCTTGGTTTTGTAATCGGCATGGCTGGATGGATCTATATTCTTTATGAAATATTTTCAGGTGAAGCTGGTAAAGCAGCAGCAAAAAGTGGAAACAAAGCTCTTGTAACTGCATTTGGTGCTATGAGAATGATCGTTACAGTA WLITVPLLMVEFYLILAAVGKANSGMFWRLLIGSVVMLVGGYLGEAGYINEMLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATCACTGTACCATTACTGATGGTAGAATTTTACTTAATTCTAGCAGCT---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCAGTTGTAATGCTAGTTGGAGGATATTTAGGAGAA---------GCG------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGAA------------------ATGCTTGGT---TTTGTAATCGGCATGGCTGGATGGATCTATATTCTTTATGAAATA---------------TTT------TCA---GGTGAAGCTGGTAAAGCAGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTA---ACT---GCA---TTT---GGT---GCTATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYLILAA---V-GKANS-GM------------FWR-LLIGSVVMLVGGYLGE---A------G--Y-----------I----------------------NE------MLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926089 [IV-Alpha8-SAR11/IMCC9063] BOUM_OTU002_env_samples gb|KJ926089| Uncultured bacterium clone BOUM OTU002 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU002 putative proteorhodopsin gene, partial cds KJ926089 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 39.0995 5.3403333 #na #na #na #na #na ATAGATTGGTTAATTACTGTACCACTTCAAATGGTAGAATTTTATTTAATTCTAGCAGCTGTAGGTAAAGCAAATTCAGGAATGTTTTGGAGATTGCTAATTGGTTCAGTTGTGATGCTAGTTGGAGGATACTTAGGAGAAGCTGGATACATCAATGAAATGCTTGGTTTCATAATCGGTATGGCAGGATGGATCTACATTCTATATGAAGTATTTTCTGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGTAACAAGGCTCTTGTGACTGCATTTGGTGCTATGAGAATGATCGTTACAGTTGGATGGGCTATTTAT IDWLITVPLQMVEFYLILAAVGKANSGMFWRLLIGSVVMLVGGYLGEAGYINEMLGFIIGMAGWIYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAGATTGG------------------------TTAATTACTGTACCACTTCAAATGGTAGAATTTTATTTAATTCTAGCAGCT---------GTA---GGTAAAGCAAATTCA---GGAATG------------------------------------TTTTGGAGA---TTGCTAATTGGTTCAGTTGTGATGCTAGTTGGAGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGAA------------------ATGCTTGGT---TTCATAATCGGTATGGCAGGATGGATCTACATTCTATATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGTAACAAGGCTCTT---GTG---ACT---GCA---TTT---GGT---GCTATG---AGAATGATCGTTACAGTT---------------------------------------------------------------GGATGG---------GCTATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDW--------LITVPLQMVEFYLILAA---V-GKANS-GM------------FWR-LLIGSVVMLVGGYLGE---A------G--Y-----------I----------------------NE------MLG-FIIGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU915881 [IV-Alpha8-SAR11/IMCC9063] US80210_env_samples_EU915881 gi|229358644|gb|EU915881| Uncultured microorganism clone US80210 putative proteorhodopsin gene, partial cds Uncultured microorganism clone US80210 putative proteorhodopsin gene, partial cds EU915881 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_surface_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTTGCCGCTACTGCTTTCTTCTTCTTAGAAGTAGGTAATGTTGCATCAGGCTGGAGAACATCAGTAATTGTTGCTGGTCTAGTAACAGGTATTGCATTCATTCACTACATGTACATGAGAGATGTGTGGGTAATGACTGGTGAGTCACCAACTGTTTACAGATATATTGACTGGTTAATTACAGTTCCACTGCAGATGGTAGAATTTTTCTTAATTCTTTCAGCAGTAGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCAGTAGTGATGCTAGTTGGAGGATACTTAGGAGAAGCTGGTTACATCAATGCAATGCTTGGTTTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTATTTTCAGGTGAAGCAGGTAAAGCTGCAGCAAAAAGTGGTAACAAAGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATTGTTACAGTAGGTTGGGCCATTTAC MLAATAFFFLEVGNVASGWRTSVIVAGLVTGIAFIHYMYMRDVWVMTGESPTVYRYIDWLITVPLQMVEFFLILSAVGKANSGMFWRLLIGSVVMLVGGYLGEAGYINAMLGFIIGMAGWIYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACTGCTTTCTTCTTCTTAGAAGTAGGTAATGTTGCATCA---GGCTGGAGAACATCAGTAATTGTTGCTGGTCTAGTAACAGGTATTGCATTCATTCACTACATGTACATGAGAGATGTGTGGGTA------------------------------ATGACT---------------------GGTGAGTCACCAACTGTTTACAGATATATTGACTGG------------------------TTAATTACAGTTCCACTGCAGATGGTAGAATTTTTCTTAATTCTTTCAGCA---------GTA---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCAGTAGTGATGCTAGTTGGAGGATACTTAGGAGAA---------GCT------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCA------------------ATGCTTGGT---TTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTA---------------TTT------TCA---GGTGAAGCAGGTAAAGCTGCAGCAAAA------AGT---GGTAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCCATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFLEVGNVAS-GWRTSVIVAGLVTGIAFIHYMYMRDVWV----------MT-------GESPTVYRYIDW--------LITVPLQMVEFFLILSA---V-GKANS-GM------------FWR-LLIGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU915848 [IV-Alpha8-SAR11/IMCC9063] APF1105_env_samples_EU915848 gi|229358578|gb|EU915848| Uncultured microorganism clone APF1105 putative proteorhodopsin gene, partial cds Uncultured microorganism clone APF1105 putative proteorhodopsin gene, partial cds EU915848 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample_at_200_m_depth Atlantic Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAATAGTGGCGGCTACTGCCTTCTTTTTAATAAGAAACTGGATTGTAAATCGGGCTGGAAAACTTCATTTAATGCCCGCAGGTCTAGTAACAGGTATTGCATTCATACACTACATGTATATGAGAGAAGTATGGGTGTCTACAGGTGACTCACCAACAGTTTACAGATATATTGACTGGTTGATCACTGTGCCACTACAAATGGTTGAATTTTACTTAATTCTATCAGCTGTAGGTAAAGCAAATTCTGGAATGTTCTGGAAATTGCTACTTGGTTCAGTTGTGATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATTAACGCTACACTTGGTTTCATTATCGGTATGGCTGGATGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGGTGGGCAATCTAC LIVAATAFFLIRNWIVNRAGKLHLMPAGLVTGIAFIHYMYMREVWVSTGDSPTVYRYIDWLITVPLQMVEFYLILSAVGKANSGMFWKLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAGTGGCGGCTACTGCCTTCTTTTTAATAAGAAACTGGATTGTAAATCGG---GCTGGAAAACTTCATTTAATGCCCGCAGGTCTAGTAACAGGTATTGCATTCATACACTACATGTATATGAGAGAAGTATGGGTG------------------------------TCTACA---------------------GGTGACTCACCAACAGTTTACAGATATATTGACTGG------------------------TTGATCACTGTGCCACTACAAATGGTTGAATTTTACTTAATTCTATCAGCT---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAAA---TTGCTACTTGGTTCAGTTGTGATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGATGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGGTGG---------GCAATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------LIVAATAFFLIRNWIVNR-AGKLHLMPAGLVTGIAFIHYMYMREVWV----------ST-------GDSPTVYRYIDW--------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWK-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EF088534 [IV-Alpha8-SAR11/IMCC9063] clone_APF1105_EF088534 gi|126843292|gb|EF088534| Uncultured bacterium clone APF1105 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone APF1105 putative proteorhodopsin gene, partial cds. EF088534 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na 200m water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na TTAATAGTGGCGGCTACTGCCTTCTTTTTAATAAGAAACTGGATTGTAAATCGGGCTGGAAAACTTCATTTAATGCCCGCAGGTCTAGTAACAGGTATTGCATTCATACACTACATGTATATGAGAGAAGTATGGGTGTCTACAGGTGACTCACCAACAGTTTACAGATATATTGACTGGTTGATCACTGTGCCACTACAAATGGTTGAATTTTACTTAATTCTATCAGCTGTAGGTAAAGCAAATTCTGGAATGTTCTGGAAATTGCTACTTGGTTCAGTTGTGATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATTAACGCTACACTTGGTTTCATTATCGGTATGGCTGGATGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGGTGGGCAATCTACCA LIVAATAFFLIRNWIVNRAGKLHLMPAGLVTGIAFIHYMYMREVWVSTGDSPTVYRYIDWLITVPLQMVEFYLILSAVGKANSGMFWKLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAGTGGCGGCTACTGCCTTCTTTTTAATAAGAAACTGGATTGTAAATCGG---GCTGGAAAACTTCATTTAATGCCCGCAGGTCTAGTAACAGGTATTGCATTCATACACTACATGTATATGAGAGAAGTATGGGTG------------------------------TCTACA---------------------GGTGACTCACCAACAGTTTACAGATATATTGACTGG------------------------TTGATCACTGTGCCACTACAAATGGTTGAATTTTACTTAATTCTATCAGCT---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAAA---TTGCTACTTGGTTCAGTTGTGATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGATGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGGTGG---------GCAATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------LIVAATAFFLIRNWIVNR-AGKLHLMPAGLVTGIAFIHYMYMREVWV----------ST-------GDSPTVYRYIDW--------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWK-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ203772 [IV-Alpha8-SAR11/IMCC9063] SS114a0E7_env_samples_DQ203772 gi|77547992|gb|DQ203772| Uncultured bacterium clone SS114a0E7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0E7 predicted proteorhodopsin gene, partial cds DQ203772 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGACTGGCTAATAACTGTGCCATTACAGATGGTAGAATTCTACTTAATTCTAGCAGCTGTAGGAAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATTGGTTCTACAGTAATGTTAGTAGGTGGATATTTAGGAGAAGCAGGATACATCAACTCTACACTTGGATTTATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCTGGAGAATCAGGAAAAGCTGCTGCAAAAAGTGGAAACAAAGCTCTTGTAACTGCTTTTGGCGCTTTAAGAATGATCGTAACAGTAGGTTGGGCCATTTATCCA SYIDWLITVPLQMVEFYLILAAVGKANSGMFWRLLIGSTVMLVGGYLGEAGYINSTLGFIIGMAGWVYILYEIFSGESGKAAAKSGNKALVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGACTGG------------------------CTAATAACTGTGCCATTACAGATGGTAGAATTCTACTTAATTCTAGCAGCT---------GTA---GGAAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCTACAGTAATGTTAGTAGGTGGATATTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACTCT------------------ACACTTGGA---TTTATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCT---GGAGAATCAGGAAAAGCTGCTGCAAAA------AGT---GGAAACAAAGCTCTT---GTA---ACT---GCT---TTT---GGC---GCTTTA---AGAATGATCGTAACAGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQMVEFYLILAA---V-GKANS-GM------------FWR-LLIGSTVMLVGGYLGE---A------G--Y-----------I----------------------NS------TLG-FIIGMAGWVYILYEI-----F--S-GESGKAAAK--S-GNKAL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422521 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-50m-g12_DQ422521 gi|90024562|gb|DQ422521| Uncultured bacterium clone med-tb04-50m-g12 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-g12 putative proteorhodopsin gene, partial cds. DQ422521 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATAACTGTGCCATTACAGATGGTAGAATTTTACTTAATTCTAGCAGCTGTAGGAAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATTGGTTCTACAGTAATGTTAGTAGGTGGATATTTAGGAGAAGCAGGATACATCAACTCTACACTTGGATTTATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCTGGAGAATCAGGAAAAGCTGCAGCAAAAGGTGGAAACAAAGCTCTTGTAACTGCTTTTGGCGCTTTAAGAATGATTGTAACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQMVEFYLILAAVGKANSGMFWRLLIGSTVMLVGGYLGEAGYINSTLGFIIGMAGWVYILYEIFSGESGKAAAKGGNKALVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATAACTGTGCCATTACAGATGGTAGAATTTTACTTAATTCTAGCAGCT---------GTA---GGAAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCTACAGTAATGTTAGTAGGTGGATATTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACTCT------------------ACACTTGGA---TTTATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCT---GGAGAATCAGGAAAAGCTGCAGCAAAA------GGT---GGAAACAAAGCTCTT---GTA---ACT---GCT---TTT---GGC---GCTTTA---AGAATGATTGTAACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYLILAA---V-GKANS-GM------------FWR-LLIGSTVMLVGGYLGE---A------G--Y-----------I----------------------NS------TLG-FIIGMAGWVYILYEI-----F--S-GESGKAAAK--G-GNKAL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422657 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-20m-c10_DQ422657 gi|90024834|gb|DQ422657| Uncultured bacterium clone med-tb04-20m-c10 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-c10 putative proteorhodopsin gene, partial cds. DQ422657 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATAACTGTGCCATTACAGATGGTAGAATTTTACTTAATTCTAGCAGCTGTAGGAAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATTGGTTCTACAGTAATGTTAGTAGGTGGATATTTAGGAGAAGCTGGATACATCAACTCTACACTTGGATTTATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCTGGAGAATCAGGAAAAGCTGCAGCAAAAAGTGGAAACAAAGCTCTTGTAACTGCTTTTGGCGCTTTAAGAATGATTGTAACAGTAGGTTGGGCCATTTATCCA RYIDWLITVPLQMVEFYLILAAVGKANSGMFWRLLIGSTVMLVGGYLGEAGYINSTLGFIIGMAGWVYILYEIFSGESGKAAAKSGNKALVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATAACTGTGCCATTACAGATGGTAGAATTTTACTTAATTCTAGCAGCT---------GTA---GGAAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCTACAGTAATGTTAGTAGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACTCT------------------ACACTTGGA---TTTATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCT---GGAGAATCAGGAAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTA---ACT---GCT---TTT---GGC---GCTTTA---AGAATGATTGTAACAGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYLILAA---V-GKANS-GM------------FWR-LLIGSTVMLVGGYLGE---A------G--Y-----------I----------------------NS------TLG-FIIGMAGWVYILYEI-----F--S-GESGKAAAK--S-GNKAL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ422640 [IV-Alpha8-SAR11/IMCC9063] clone_med-tb04-20m-a6_DQ422640 gi|90024800|gb|DQ422640| Uncultured bacterium clone med-tb04-20m-a6 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-a6 putative proteorhodopsin gene, partial cds. DQ422640 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATAACTGTACCATTACAGATGGTAGAATTTTACTTAATTCTAGCAGCTGTAGGAAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATTGGTTCTACAGTAATGTTAGTAGGTGGATATTTAGGAGAAGCTGGATACATCAACTCTACACTTGGATTTATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCTGGAGAATCAGGAAAAGCTGCAGCAAAAAGTGGAAACAAAGCTCTTGTAACTGCTTTTGGCGCTTTAAGAATGATCGTAACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQMVEFYLILAAVGKANSGMFWRLLIGSTVMLVGGYLGEAGYINSTLGFIIGMAGWVYILYEIFSGESGKAAAKSGNKALVTAFGALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATAACTGTACCATTACAGATGGTAGAATTTTACTTAATTCTAGCAGCT---------GTA---GGAAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCTACAGTAATGTTAGTAGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACTCT------------------ACACTTGGA---TTTATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCT---GGAGAATCAGGAAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTA---ACT---GCT---TTT---GGC---GCTTTA---AGAATGATCGTAACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYLILAA---V-GKANS-GM------------FWR-LLIGSTVMLVGGYLGE---A------G--Y-----------I----------------------NS------TLG-FIIGMAGWVYILYEI-----F--S-GESGKAAAK--S-GNKAL-V-T-A-F-G-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_1105101165298 [IV-Alpha8-SAR11/IMCC9063] JCVI_ORF_1105101165298_GS014_Coastal_1m jcvi|1105101165298| 1105101165298 JCVI ORF 1105101165298 1105101165298 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 20-DEC-2003 Coastal/1m_depth/S_n.a/GS014/South_of_Charleston/SC/North_American_East_Coast Atlantic Ocean marine 32.506943 -79.263885 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAACTGTTTGCTCTTACAGCTGTAGCTCTTATCGGAATTACAGGTGTTGCAAACGCTGCGACCGCAATGTTAGCTCAAGATGACTTTGTTGGAATTTCCTTTTGGGTAATTTCAATGGGTATGTTGGCAGCTACAGCGTTCTTCTTCATGGAAAGAAGCACTGTTGCACCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGATGTATGGGTAAGTACTGGTGATTCACCAACGGTATACAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAATTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATTTTCTGGAGATTGTTAATCGGTTCATTGGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCTGCTAAGAGCGGAAACAAAGCTCTAGTGACTGCGTTCGGTGCAATGAGAATGATTGTAACTGTAGGTTGGGCTATTTACCCATTAGGTTATGTATTTGGTTACCTAACTGGTGGTGTAGACGCTAACTCACTTAACGTGGTTTACAACTTAGCTGACTTTATAAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAGTAAGTTCAGCTGGCGCAAGAAGCAGA MKKLKLFALTAVALIGITGVANAATAMLAQDDFVGISFWVISMGMLAATAFFFMERSTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVSTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAAVSSAGARSR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAACTGTTTGCTCTTACAGCTGTAGCTCTTATCGGAATTACAGGTGTTGCAAACGCTGCGACCGCA---ATGTTAGCTCAAGATGACTTTGTTGGAATTTCCTTTTGGGTAATTTCAATGGGTATGTTGGCAGCTACAGCGTTCTTCTTCATGGAAAGAAGCACTGTTGCACCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGATGTATGGGTA------------------------------AGTACT---------------------GGTGATTCACCAACGGTATACAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAATTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTGGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCTGCTAAG------AGC---GGAAACAAAGCTCTA---GTG---ACT---GCG---TTC---GGT---GCAATG---AGAATGATTGTAACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTATGTATTTGGTTACCTA---------------------------------------ACTGGTGGTGTAGACGCTAACTCACTTAACGTGGTTTACAACTTAGCTGACTTTATAAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAGTAAGTTCA---GCTGGCGCAAGAAGCAGA--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALTAVALIGITGVANAATA-MLAQDDFVGISFWVISMGMLAATAFFFMERSTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------ST-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAAVSS-AGARSR----------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU915850 [IV-Alpha8-SAR11/IMCC9063] APF1107_env_samples_EU915850 gi|229358582|gb|EU915850| Uncultured microorganism clone APF1107 putative proteorhodopsin gene, partial cds Uncultured microorganism clone APF1107 putative proteorhodopsin gene, partial cds EU915850 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample_at_200_m_depth Atlantic Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na GTATTAGCGGCTACTGTATTCTTCTTCATGGAAAGAAGTTCTGTAGCACCAGCTTGGAAAACGTCAGTAACTGTAGCTGGTCTTATAACTGGTATTGCATTCATTCACTACATGTACATGAGAGGTGTATGGGTTCAAACAGGAGACTCACCAACAGTATATAGATATATCGACTGGTTAATCACTGTACCATTACAGATGGTAGAGTTTTATTTAATTCTAGTAGCCGTAAGAAAAGCAACCTCTGGAATTTTCTGGAGATTGTTAATCGGTCCATTAGTAATGTTATGTGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCTAATAAGAGTGGAAACAAAGCTCTTGTAACTGCATTTAGTACAACGAGAATGATTGTAACTGTAGGTTGGGCGATTACT VLAATVFFFMERSSVAPAWKTSVTVAGLITGIAFIHYMYMRGVWVQTGDSPTVYRYIDWLITVPLQMVEFYLILVAVRKATSGIFWRLLIGPLVMLCGGYLGEAGYINATLGFVIGMAGWVYILYEVFSGEAGKAANKSGNKALVTAFSTTRMIVTVGWAIT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGGCTACTGTATTCTTCTTCATGGAAAGAAGTTCTGTAGCACCA---GCTTGGAAAACGTCAGTAACTGTAGCTGGTCTTATAACTGGTATTGCATTCATTCACTACATGTACATGAGAGGTGTATGGGTT------------------------------CAAACA---------------------GGAGACTCACCAACAGTATATAGATATATCGACTGG------------------------TTAATCACTGTACCATTACAGATGGTAGAGTTTTATTTAATTCTAGTAGCC---------GTA---AGAAAAGCAACCTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATCGGTCCATTAGTAATGTTATGTGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTAATAAG------AGT---GGAAACAAAGCTCTT---GTA---ACT---GCA---TTT---AGT---ACAACG---AGAATGATTGTAACTGTA---------------------------------------------------------------GGTTGG---------GCGATTACT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------VLAATVFFFMERSSVAP-AWKTSVTVAGLITGIAFIHYMYMRGVWV----------QT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILVA---V-RKATS-GI------------FWR-LLIGPLVMLCGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEV-----F--S-GEAGKAANK--S-GNKAL-V-T-A-F-S-TT-RMIVTV---------------------GW---AIT--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EF088536 [IV-Alpha8-SAR11/IMCC9063] clone_APF1107_EF088536 gi|126843296|gb|EF088536| Uncultured bacterium clone APF1107 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone APF1107 putative proteorhodopsin gene, partial cds. EF088536 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na 200m water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na GTATTAGCGGCTACTGTATTCTTCTTCATGGAAAGAAGTTCTGTAGCACCAGCTTGGAAAACGTCAGTAACTGTAGCTGGTCTTATAACTGGTATTGCATTCATTCACTACATGTACATGAGAGGTGTATGGGTTCAAACAGGAGACTCACCAACAGTATATAGATATATCGACTGGTTAATCACTGTACCATTACAGATGGTAGAGTTTTATTTAATTCTAGTAGCCGTAAGAAAAGCAACCTCTGGAATTTTCTGGAGATTGTTAATCGGTCCATTAGTAATGTTATGTGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCTAATAAGAGTGGAAACAAAGCTCTTGTAACTGCATTTAGTACAACGAGAATGATTGTAACTGTAGGTTGGGCGATTACTCCA VLAATVFFFMERSSVAPAWKTSVTVAGLITGIAFIHYMYMRGVWVQTGDSPTVYRYIDWLITVPLQMVEFYLILVAVRKATSGIFWRLLIGPLVMLCGGYLGEAGYINATLGFVIGMAGWVYILYEVFSGEAGKAANKSGNKALVTAFSTTRMIVTVGWAITP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGGCTACTGTATTCTTCTTCATGGAAAGAAGTTCTGTAGCACCA---GCTTGGAAAACGTCAGTAACTGTAGCTGGTCTTATAACTGGTATTGCATTCATTCACTACATGTACATGAGAGGTGTATGGGTT------------------------------CAAACA---------------------GGAGACTCACCAACAGTATATAGATATATCGACTGG------------------------TTAATCACTGTACCATTACAGATGGTAGAGTTTTATTTAATTCTAGTAGCC---------GTA---AGAAAAGCAACCTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATCGGTCCATTAGTAATGTTATGTGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTAATAAG------AGT---GGAAACAAAGCTCTT---GTA---ACT---GCA---TTT---AGT---ACAACG---AGAATGATTGTAACTGTA---------------------------------------------------------------GGTTGG---------GCGATTACTCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------VLAATVFFFMERSSVAP-AWKTSVTVAGLITGIAFIHYMYMRGVWV----------QT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILVA---V-RKATS-GI------------FWR-LLIGPLVMLCGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEV-----F--S-GEAGKAANK--S-GNKAL-V-T-A-F-S-TT-RMIVTV---------------------GW---AITP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU915731 [IV-Alpha8-SAR11/IMCC9063] APF9063_env_samples_EU915731 gi|229358344|gb|EU915731| Uncultured microorganism clone APF9063 putative proteorhodopsin gene, partial cds Uncultured microorganism clone APF9063 putative proteorhodopsin gene, partial cds EU915731 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample_at_75_m_depth Atlantic Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACCGCGTTCTTCTTCATGGAAAGAAGCACTGTAGCTCCAGGCTGGAAAACGTCTGTAACTGTAGCTGGTCTTGTTACTGGTATTGCATTCATTCACTACATGTATATGAGAGGTGTTTGGGTACAAACAGGTGACTCACCAACAGTATATAGATATATCGACTGGTTAATCACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATTTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTATGTGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGAGAAGCTGGTAAAGCTGCTGCCAAGAGTGGAAACAAAGCTCTTGTAACTGCATTCAGTGCAATGAGAATGATTGTAACTGTAGGTTGGGCCATCTAC MVAATAFFFMERSTVAPGWKTSVTVAGLVTGIAFIHYMYMRGVWVQTGDSPTVYRYIDWLITVPLQMVEFYLILVAVRKANSGIFWRLLIGSLVMLCGGYLGEAGYINATLGFVIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFSAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACCGCGTTCTTCTTCATGGAAAGAAGCACTGTAGCTCCA---GGCTGGAAAACGTCTGTAACTGTAGCTGGTCTTGTTACTGGTATTGCATTCATTCACTACATGTATATGAGAGGTGTTTGGGTA------------------------------CAAACA---------------------GGTGACTCACCAACAGTATATAGATATATCGACTGG------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTATGTGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGAGAAGCTGGTAAAGCTGCTGCCAAG------AGT---GGAAACAAAGCTCTT---GTA---ACT---GCA---TTC---AGT---GCAATG---AGAATGATTGTAACTGTA---------------------------------------------------------------GGTTGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMERSTVAP-GWKTSVTVAGLVTGIAFIHYMYMRGVWV----------QT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLCGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-S-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EF088524 [IV-Alpha8-SAR11/IMCC9063] clone_APF9063_EF088524 gi|126843265|gb|EF088524| Uncultured bacterium clone APF9063 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone APF9063 putative proteorhodopsin gene, partial cds. EF088524 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na 75m water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTGGCCGCTACCGCGTTCTTCTTCATGGAAAGAAGCACTGTAGCTCCAGGCTGGAAAACGTCTGTAACTGTAGCTGGTCTTGTTACTGGTATTGCATTCATTCACTACATGTATATGAGAGGTGTTTGGGTACAAACAGGTGACTCACCAACAGTATATAGATATATCGACTGGTTAATCACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATTTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTATGTGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGAGAAGCTGGTAAAGCTGCTGCCAAGAGTGGAAACAAAGCTCTTGTAACTGCATTCAGTGCAATGAGAATGATTGTAACTGTAGGTTGGGCCATCTACCCA MVAATAFFFMERSTVAPGWKTSVTVAGLVTGIAFIHYMYMRGVWVQTGDSPTVYRYIDWLITVPLQMVEFYLILVAVRKANSGIFWRLLIGSLVMLCGGYLGEAGYINATLGFVIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFSAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACCGCGTTCTTCTTCATGGAAAGAAGCACTGTAGCTCCA---GGCTGGAAAACGTCTGTAACTGTAGCTGGTCTTGTTACTGGTATTGCATTCATTCACTACATGTATATGAGAGGTGTTTGGGTA------------------------------CAAACA---------------------GGTGACTCACCAACAGTATATAGATATATCGACTGG------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTATGTGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGAGAAGCTGGTAAAGCTGCTGCCAAG------AGT---GGAAACAAAGCTCTT---GTA---ACT---GCA---TTC---AGT---GCAATG---AGAATGATTGTAACTGTA---------------------------------------------------------------GGTTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMERSTVAP-GWKTSVTVAGLVTGIAFIHYMYMRGVWV----------QT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLCGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-S-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EU915868 [IV-Alpha8-SAR11/IMCC9063] APF1146_env_samples_EU915868 gi|229358618|gb|EU915868| Uncultured microorganism clone APF1146 putative proteorhodopsin gene, partial cds Uncultured microorganism clone APF1146 putative proteorhodopsin gene, partial cds EU915868 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample_at_200_m_depth Atlantic Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTGGCCGCTACTGCGTTCTTCTTCATGGAAAGAAGCACGGTTGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCAGGTCTAGTAACTGGTATTGCATTCATTCACTACATGTATATGAGAGATGTTTGGGTGACTACTGGCGACTCGCCAACAGTATATAGATATATTGACTGGTTAATTACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCAGGAATTTTCTGGAGATTGTTATTAGGTTCATTAGTAATGTTAATTGGTGGATATCTAGGAGAAGCAGGATATATCAATTCTACACTTGGTTTCATAATTGGAATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAATCTCTAGTAACTGCTTTCAGTGCAATGAGAATGATTGTTACTGTAGGCTGGGCAATTTAC MLAATAFFFMERSTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMVEFYLILVAVRKANSGIFWRLLLGSLVMLIGGYLGEAGYINSTLGFIIGMAGWVYILYEIFSGEAGKAAAKSGNKSLVTAFSAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGCGTTCTTCTTCATGGAAAGAAGCACGGTTGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCAGGTCTAGTAACTGGTATTGCATTCATTCACTACATGTATATGAGAGATGTTTGGGTG------------------------------ACTACT---------------------GGCGACTCGCCAACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCA---GGAATT------------------------------------TTCTGGAGA---TTGTTATTAGGTTCATTAGTAATGTTAATTGGTGGATATCTAGGAGAA---------GCA------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AATTCT------------------ACACTTGGT---TTCATAATTGGAATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAATCTCTA---GTA---ACT---GCT---TTC---AGT---GCAATG---AGAATGATTGTTACTGTA---------------------------------------------------------------GGCTGG---------GCAATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFMERSTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILVA---V-RKANS-GI------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NS------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKSL-V-T-A-F-S-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EF088554 [IV-Alpha8-SAR11/IMCC9063] clone_APF1146_EF088554 gi|126843332|gb|EF088554| Uncultured bacterium clone APF1146 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone APF1146 putative proteorhodopsin gene, partial cds. EF088554 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na 200m water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGCTGGCCGCTACTGCGTTCTTCTTCATGGAAAGAAGCACGGTTGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCAGGTCTAGTAACTGGTATTGCATTCATTCACTACATGTATATGAGAGATGTTTGGGTGACTACTGGCGACTCGCCAACAGTATATAGATATATTGACTGGTTAATTACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCAGGAATTTTCTGGAGATTGTTATTAGGTTCATTAGTAATGTTAATTGGTGGATATCTAGGAGAAGCAGGATATATCAATTCTACACTTGGTTTCATAATTGGAATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAATCTCTAGTAACTGCTTTCAGTGCAATGAGAATGATTGTTACTGTAGGCTGGGCAATTTACCCA MLAATAFFFMERSTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMVEFYLILVAVRKANSGIFWRLLLGSLVMLIGGYLGEAGYINSTLGFIIGMAGWVYILYEIFSGEAGKAAAKSGNKSLVTAFSAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGCGTTCTTCTTCATGGAAAGAAGCACGGTTGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCAGGTCTAGTAACTGGTATTGCATTCATTCACTACATGTATATGAGAGATGTTTGGGTG------------------------------ACTACT---------------------GGCGACTCGCCAACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCA---GGAATT------------------------------------TTCTGGAGA---TTGTTATTAGGTTCATTAGTAATGTTAATTGGTGGATATCTAGGAGAA---------GCA------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AATTCT------------------ACACTTGGT---TTCATAATTGGAATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAATCTCTA---GTA---ACT---GCT---TTC---AGT---GCAATG---AGAATGATTGTTACTGTA---------------------------------------------------------------GGCTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFMERSTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILVA---V-RKANS-GI------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NS------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKSL-V-T-A-F-S-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_1105097902880 [IV-Alpha8-SAR11/IMCC9063] JCVI_ORF_1105097902880_GS030_Warm_Seep_19m jcvi|1105097902880| 1105097902880 JCVI ORF 1105097902880 1105097902880 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 09-FEB-2004 Warm_Seep/19m_depth/S_n.a/GS030/Warm_seep/Roca_Redonda/Galapagos_Islands Red Sea marine 0.27222222 -91.63333 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCTCTTACAGCTGTTGCTCTTATGGGTATTACAGGTGTAGCAAACGCTGAGACCGCGATGTTAGCTCAAGATGACTTTGTTGGAATATCTTTTTGGGTAATTTCAATGGGTATGTTGGCTGCTACAGCATTCTTCTTCATGGAAAGAAGTACTGTTGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCATTCATCCACTACATGTACATGAGAGATGTATGGGTGACTACAGGCGACTCACCAACAGTGTATAGATACATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAGTTCTGGAATTTTCTGGAGATTGTTAATTGGTTCATTAGTAATGTTAATTGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCGTAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAATAAATCTCTAGTAACTGCGTTCAGTGCAATGAGAATGATTGTAACTGTAGGTTGGGCAATTTATCCATTAGGTTATGTATTTGGTTACTTAACAGGTGGTGTAGATGCTAACTCACTTAACGTTGTTTACAACTTAGCTGACTTTATAAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAGTAAGTTCAGCTGGTGCAAGAAGCAGA MKKLKLFALTAVALMGITGVANAETAMLAQDDFVGISFWVISMGMLAATAFFFMERSTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKASSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEVFSGEAGKAAAKSGNKSLVTAFSAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAAVSSAGARSR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCTCTTACAGCTGTTGCTCTTATGGGTATTACAGGTGTAGCAAACGCTGAGACCGCG---ATGTTAGCTCAAGATGACTTTGTTGGAATATCTTTTTGGGTAATTTCAATGGGTATGTTGGCTGCTACAGCATTCTTCTTCATGGAAAGAAGTACTGTTGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCATTCATCCACTACATGTACATGAGAGATGTATGGGTG------------------------------ACTACA---------------------GGCGACTCACCAACAGTGTATAGATACATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAGTTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGTTAATTGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCGTAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAATAAATCTCTA---GTA---ACT---GCG---TTC---AGT---GCAATG---AGAATGATTGTAACTGTA---------------------------------------------------------------GGTTGG---------GCAATTTATCCATTAGGTTATGTATTTGGTTACTTA---------------------------------------ACAGGTGGTGTAGATGCTAACTCACTTAACGTTGTTTACAACTTAGCTGACTTTATAAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAGTAAGTTCA---GCTGGTGCAAGAAGCAGA--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALTAVALMGITGVANAETA-MLAQDDFVGISFWVISMGMLAATAFFFMERSTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKASS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKSL-V-T-A-F-S-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAAVSS-AGARSR----------------------------------- [IV-Alpha8-SAR11/IMCC9063]_1105099708648 [IV-Alpha8-SAR11/IMCC9063] JCVI_ORF_1105099708648_GS028_Coastal_2m jcvi|1105099708648| 1105099708648 JCVI ORF 1105099708648 1105099708648 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 04-FEB-2004 Coastal/2m_depth/S_n.a/GS028/Coastal_Floreana/Galapagos_Islands Pacific Ocean marine -1.2169445 -90.319725 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCTCTTACAGCTGTTGCCCTAATGGGAGTTACAGGTGTAGCAAACGCTGAGACCGCTATGTTAGCTCAAGATGACTTTGTTGGGATTTCCTTTTGGGTAATTTCAATGGGTATGTTGGCTGCTACAGCATTCTTCTTCATGGAAAGAAGCACTGTTGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCACTACATGTACATGAGAGATGTATGGGTGACTACAGGCGACTCACCAACGGTATATAGATATATTGATTGGTTAATTACTGTGCCATTACAGATGATAGAATTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATTTTCTGGAGATTGTTAATTGGTTCACTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGGTATACATTCTATATGAAGTATTCTCTGGTGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAATAAATCTCTAGTAACTGCGTTCAGTGCAATGAGAATGATTGTAACTGTAGGTTGGGCTATTTACCCATTAGGTTATGTATTTGGTTACCTAACAGGTGGTGTAGATGCTAACTCACTTAACGTTGTTTACAACTTAGCTGACTTTATAAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAGTAAGTTCAGCTGGTGCAAGAAGCAGA MKKLKLFALTAVALMGVTGVANAETAMLAQDDFVGISFWVISMGMLAATAFFFMERSTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEVFSGEAGKAAAKSGNKSLVTAFSAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAAVSSAGARSR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCTCTTACAGCTGTTGCCCTAATGGGAGTTACAGGTGTAGCAAACGCTGAGACCGCT---ATGTTAGCTCAAGATGACTTTGTTGGGATTTCCTTTTGGGTAATTTCAATGGGTATGTTGGCTGCTACAGCATTCTTCTTCATGGAAAGAAGCACTGTTGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCACTACATGTACATGAGAGATGTATGGGTG------------------------------ACTACA---------------------GGCGACTCACCAACGGTATATAGATATATTGATTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAATTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGTTCACTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGGTATACATTCTATATGAAGTA---------------TTC------TCT---GGTGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAATAAATCTCTA---GTA---ACT---GCG---TTC---AGT---GCAATG---AGAATGATTGTAACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTATGTATTTGGTTACCTA---------------------------------------ACAGGTGGTGTAGATGCTAACTCACTTAACGTTGTTTACAACTTAGCTGACTTTATAAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAGTAAGTTCA---GCTGGTGCAAGAAGCAGA--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALTAVALMGVTGVANAETA-MLAQDDFVGISFWVISMGMLAATAFFFMERSTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKSL-V-T-A-F-S-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAAVSS-AGARSR----------------------------------- [IV-Alpha8-SAR11/IMCC9063]_1105120863874 [IV-Alpha8-SAR11/IMCC9063] JCVI_ORF_1105120863874_GS017_Open_Ocean_2m jcvi|1105120863874| 1105120863874 JCVI ORF 1105120863874 1105120863874 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 09-janv-04 Open_Ocean/2m_depth/S_35.8_psu/GS017/Yucatan_Channel/Caribbean_Sea Caribbean Sea marine 20.5225 -85.41361 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCTCTTACAGTTGTTGCCCTTATTGGTGTAACAACAGTAGCAAACGCTGCGACCGCTATGTTAGCTCAAGATGATTTCGTTGGAATATCTTTTTGGATAATTTCAATGGGTATGTTGGCTTCAACAGCTTTTTTCTTTATGGAGAGAAGCACAGTTAACCCAGCATGGAAAACATCTGTAACAGTAGCAGGTCTTGTAACTGGTATCGCTTTTATCCATTACATGTACATGAGAGATGTATGGGTAACTACAGGTGACTCACCAACAGTATATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAATTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAATTCTGGAATTTTCTGGAGATTGTTAATTGGTTCATTAGTAATGTTAATTGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGAAAAGCTGCGTCTAAAAGTGGAAACAAAGCACTTGTAACCGCTTTTGGTGCAATGAGAATGATTGTTACAGTAGGTTGGGCAATTTATCCATTAGGTTATGTATTCGGTTACCTAACAGGTGGTGTAGATGCTAACTCACTAAACGTCGTTTACAATTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAGTAAGTTCTGGAGCTGGATCAAGAGCTAGA MKKLKLFALTVVALIGVTTVANAATAMLAQDDFVGISFWIISMGMLASTAFFFMERSTVNPAWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAASKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAAVSSGAGSRAR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCTCTTACAGTTGTTGCCCTTATTGGTGTAACAACAGTAGCAAACGCTGCGACCGCT---ATGTTAGCTCAAGATGATTTCGTTGGAATATCTTTTTGGATAATTTCAATGGGTATGTTGGCTTCAACAGCTTTTTTCTTTATGGAGAGAAGCACAGTTAACCCA---GCATGGAAAACATCTGTAACAGTAGCAGGTCTTGTAACTGGTATCGCTTTTATCCATTACATGTACATGAGAGATGTATGGGTA------------------------------ACTACA---------------------GGTGACTCACCAACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAATTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAATTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGTTAATTGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCGTCTAAA------AGT---GGAAACAAAGCACTT---GTA---ACC---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTATCCATTAGGTTATGTATTCGGTTACCTA---------------------------------------ACAGGTGGTGTAGATGCTAACTCACTAAACGTCGTTTACAATTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAGTAAGTTCTGGAGCTGGATCAAGAGCTAGA--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALTVVALIGVTTVANAATA-MLAQDDFVGISFWIISMGMLASTAFFFMERSTVNP-AWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAAVSSGAGSRAR----------------------------------- [IV-Alpha8-SAR11/IMCC9063]_DQ203602 [IV-Alpha8-SAR11/IMCC9063] medHO120C1_env_samples_DQ203602 gi|77547652|gb|DQ203602| Uncultured bacterium clone medHO120C1 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120C1 predicted proteorhodopsin gene, partial cds DQ203602 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGACTGGCTAATTACTGTGCCATTACAGATGATAGAATTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATTTTCTGGAGATTGTTAATTGGTTCATTGGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACAGTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGAAAAGCTGCTTCTAAAAGTGGAAACAAGGCTCTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACAGTAGGTTGGGCAATTTATCCA RYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATVGFIIGMAGWVYILYEIFSGEAGKAASKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGACTGG------------------------CTAATTACTGTGCCATTACAGATGATAGAATTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTGGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACAGTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCTTCTAAA------AGT---GGAAACAAGGCTCTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TVG-FIIGMAGWVYILYEI-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_1105137425228 [IV-Alpha8-SAR11/IMCC9063] JCVI_ORF_1105137425228 jcvi|1105137425228| 1105137425228 JCVI ORF 1105137425228 1105137425228 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.22_0.8 other #na 26-FEB-2003 Open_Ocean/5m_depth/S_36.7_psu/GS000b/Sargasso_Station_11/Sargasso_Sea Sargasso Sea marine 31.175 -64.32433 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCTCTTACAGCTGTTGCCCTAATGGGTATTACAACTGTAGCAAACGCTGCGACCGCTATGTTAGCGCAAGATGACTTCGTTGGAATATCTTTTTGGATAATTTCAATGGGTATGTTGGCTGCAACAGCTTTTTTCTTTATGGAAAGAAGTACTGTTAATCCAGCATGGAAGACATCAGTAACAGTAGCAGGTCTAGTAACTGGTATTGCTTTTATCCATTACATGTACATGAGAGATGTATGGGTATCAACTGGCGATTCACCAACAGTATACAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAATTCTACTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATTTTCTGGAGATTGTTAATTGGTTCACTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCTTCTAAAAGTGGAAACAAAGCTCTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACAGTAGGTTGGGCAATTTACCCACTAGGTTATGTATTTGGTTACCTAACAGGTGGTGTAGACGCTAACGCACTAAACGTCGTTTACAATTTAGCTGACTTCATTAACAAAATGCATTCGGTC MKKLKLFALTAVALMGITTVANAATAMLAQDDFVGISFWIISMGMLAATAFFFMERSTVNPAWKTSVTVAGLVTGIAFIHYMYMRDVWVSTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDANALNVVYNLADFINKMHSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCTCTTACAGCTGTTGCCCTAATGGGTATTACAACTGTAGCAAACGCTGCGACCGCT---ATGTTAGCGCAAGATGACTTCGTTGGAATATCTTTTTGGATAATTTCAATGGGTATGTTGGCTGCAACAGCTTTTTTCTTTATGGAAAGAAGTACTGTTAATCCA---GCATGGAAGACATCAGTAACAGTAGCAGGTCTAGTAACTGGTATTGCTTTTATCCATTACATGTACATGAGAGATGTATGGGTA------------------------------TCAACT---------------------GGCGATTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAATTCTACTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGTTCACTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCTTCTAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCACTAGGTTATGTATTTGGTTACCTA---------------------------------------ACAGGTGGTGTAGACGCTAACGCACTAAACGTCGTTTACAATTTAGCTGACTTCATTAACAAAATGCATTCGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------MKKLKLFALTAVALMGITTVANAATA-MLAQDDFVGISFWIISMGMLAATAFFFMERSTVNP-AWKTSVTVAGLVTGIAFIHYMYMRDVWV----------ST-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANALNVVYNLADFINKMHSV---------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EF088571 [IV-Alpha8-SAR11/IMCC9063] clone_AT37020_EF088571 gi|126843381|gb|EF088571| Uncultured bacterium clone AT37020 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT37020 putative proteorhodopsin gene, partial cds. EF088571 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na surface water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTAGCCGCTACTGTTTTCTTTTTTATGGAGAGAAGCACTGTAAATCCTGCATGGAAAACATCAGTAACAGTAGCTGGTCTTGTAACTGGTATTGCGTTTATCCACTACATGTACATGAGAGATGTATGGGTAAGTACTGGCGATTCACCAACAGTATATAGATATATTGATTGGTTAATTACTGTTCCATTACAGATGATAGAATTCTACTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATATTCTGGAGATTACTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGGAGCTGGATACATCAACGCTACACTTGGTTTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCTTCAAAAAGCGGAAACAAAGCTCTTGTTACTGCATTCAGTGCAATGAGAATGATCGTTACAGTAGGGTGGGCGATATACCCA MVAATVFFFMERSTVNPAWKTSVTVAGLVTGIAFIHYMYMRDVWVSTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGGAGYINATLGFVIGMAGWVYILYEVFSGEAGKAASKSGNKALVTAFSAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTTTTCTTTTTTATGGAGAGAAGCACTGTAAATCCT---GCATGGAAAACATCAGTAACAGTAGCTGGTCTTGTAACTGGTATTGCGTTTATCCACTACATGTACATGAGAGATGTATGGGTA------------------------------AGTACT---------------------GGCGATTCACCAACAGTATATAGATATATTGATTGG------------------------TTAATTACTGTTCCATTACAGATGATAGAATTCTACTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATA------------------------------------TTCTGGAGA---TTACTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGGA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTTCAAAA------AGC---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTC---AGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGGTGG---------GCGATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERSTVNP-AWKTSVTVAGLVTGIAFIHYMYMRDVWV----------ST-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGG---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-S-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_EF088580 [IV-Alpha8-SAR11/IMCC9063] clone_AT37036_EF088580 gi|126843399|gb|EF088580| Uncultured bacterium clone AT37036 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT37036 putative proteorhodopsin gene, partial cds. EF088580 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na surface water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGCTTGCCGCTACTGTTTTCTTCTTTATGGAGAGAAGCACTGTAAATCCTGCATGGAAAACATCAGTAACAGTAGCTGGTCTTGTAACTGGTATTGCATTTATCCACTACATGTACATGAGAGATGTATGGGTAAGTACTGGCGATTCACCAACAGTATATAGATATATTGATTGGTTAATTACTGTTCCATTACAGATGATAGAATTCTACTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATATTCTGGAGATTACTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCTTCAAAAAGCGGAAACAAAGCTCTTGTTACTGCATTCAGTGCAATGAGAATGATCGTTACAGTAGGTTGGGCTATCTACCCA MLAATVFFFMERSTVNPAWKTSVTVAGLVTGIAFIHYMYMRDVWVSTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEVFSGEAGKAASKSGNKALVTAFSAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACTGTTTTCTTCTTTATGGAGAGAAGCACTGTAAATCCT---GCATGGAAAACATCAGTAACAGTAGCTGGTCTTGTAACTGGTATTGCATTTATCCACTACATGTACATGAGAGATGTATGGGTA------------------------------AGTACT---------------------GGCGATTCACCAACAGTATATAGATATATTGATTGG------------------------TTAATTACTGTTCCATTACAGATGATAGAATTCTACTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATA------------------------------------TTCTGGAGA---TTACTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTTCAAAA------AGC---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTC---AGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFMERSTVNP-AWKTSVTVAGLVTGIAFIHYMYMRDVWV----------ST-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-S-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_1105121434690 [IV-Alpha8-SAR11/IMCC9063] JCVI_ORF_1105121434690_GS014_Coastal_1m jcvi|1105121434690| 1105121434690 JCVI ORF 1105121434690 1105121434690 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 20-DEC-2003 Coastal/1m_depth/S_n.a/GS014/South_of_Charleston/SC/North_American_East_Coast Atlantic Ocean marine 32.506943 -79.263885 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCTCTTACAGCTGTTGCCCTTATGGGTGTTACAACTGTAGCAAACGCTGCGACCGCTATGTTAGCTCAAGATGACTTCGTTGGAATATCTTTTTGGATAATTTCAATGGGTATGTTGGCTGCAACAGCTTTTTTCTTTATGGAAAGAAGCACTGTAAATCCAGCATGGAAGACATCTGTAACAGTAGCTGGTCTAGTAACTGGTATTGCATTTATCCATTACATGTACATGAGAGATGTATGGGTAAGTACTGGCGATTCACCAACAGTATATAGATATATTGATTGGTTAATTACTGTACCATTACAGATGATAGAATTTTACTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATTTTCTGGAGATTGTTAATTGGTTCACTAGTAATGTTGATCGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCTAATAAGAGTGGAAACAAAGCTCTTGTAACTGCATTTGGTGCGATGAGAATGATCGTAACAGTAGGTTGGGCTATTTACCCATTAGGTTATGTATTTGGTTACCTAACTGGTGGAGTAGACGCTAACACACTTAACGTAGTTTACAACTTAGCTGACTTCATAAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAGTTAGTTCAGGAGCTGGCTCAAGAGCAAGA MKKLKLFALTAVALMGVTTVANAATAMLAQDDFVGISFWIISMGMLAATAFFFMERSTVNPAWKTSVTVAGLVTGIAFIHYMYMRDVWVSTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAANKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDANTLNVVYNLADFINKIAFGLVIWAAAVSSGAGSRAR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCTCTTACAGCTGTTGCCCTTATGGGTGTTACAACTGTAGCAAACGCTGCGACCGCT---ATGTTAGCTCAAGATGACTTCGTTGGAATATCTTTTTGGATAATTTCAATGGGTATGTTGGCTGCAACAGCTTTTTTCTTTATGGAAAGAAGCACTGTAAATCCA---GCATGGAAGACATCTGTAACAGTAGCTGGTCTAGTAACTGGTATTGCATTTATCCATTACATGTACATGAGAGATGTATGGGTA------------------------------AGTACT---------------------GGCGATTCACCAACAGTATATAGATATATTGATTGG------------------------TTAATTACTGTACCATTACAGATGATAGAATTTTACTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGTTCACTAGTAATGTTGATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTAATAAG------AGT---GGAAACAAAGCTCTT---GTA---ACT---GCA---TTT---GGT---GCGATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTATGTATTTGGTTACCTA---------------------------------------ACTGGTGGAGTAGACGCTAACACACTTAACGTAGTTTACAACTTAGCTGACTTCATAAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAGTTAGTTCAGGAGCTGGCTCAAGAGCAAGA--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALTAVALMGVTTVANAATA-MLAQDDFVGISFWIISMGMLAATAFFFMERSTVNP-AWKTSVTVAGLVTGIAFIHYMYMRDVWV----------ST-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAANK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANTLNVVYNLADFINKIAFGLVIWAAAVSSGAGSRAR----------------------------------- [IV-Alpha8-SAR11/IMCC9063]_1112732442573 [IV-Alpha8-SAR11/IMCC9063] JCVI_ORF_1112732442573_GS117a_Coastal_sample_2m jcvi|1112732442573| 1112732442573 JCVI ORF 1112732442573 1112732442573 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 09-sept-05 Coastal_sample/2m_depth/S_35.5_psu/GS117a/St._Anne_Island/Seychelles/Indian_Ocean Indian Ocean marine -4.613611 55.50861 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf CTGTTTGCTCTAACAGCTGTTGCCCTAATGGGTGTTACAACTGTAGCAAACGCTGCGACCGCTATGTTAGCTCAAGATGACTTCGTTGGAATATCTTTTTGGATAATTTCAATGGGTATGTTGGCTGCAACAGCTTTTTTCTTTATGGAGAGAAGCACTGTAAATCCAGCATGGAAGACATCAGTAACAGTAGCAGGTCTAGTAACTGGTATTGCATTTATCCATTACATGTACATGAGAGATGTATGGGTAAGTACTGGTGATTCACCAACAGTATATAGATATATTGACTGGTTAATTACTGTGCCACTACAGATGATAGAATTTTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATTTTCTGGAGATTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCTAATAAGAGTGGAAACAAAGCTCTTGTAACTGCATTTGGTGCGATGAGAATGATCGTAACAGTAGGTTGGGCAATTTACCCATTAGGTTATGTATTTGGTTATTTAACTGGTGGAGTAGATGCAAACACACTTAACGTAGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAGTTAGTTCTGGAGCTGGTGCAAGAAGCAGA LFALTAVALMGVTTVANAATAMLAQDDFVGISFWIISMGMLAATAFFFMERSTVNPAWKTSVTVAGLVTGIAFIHYMYMRDVWVSTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAANKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDANTLNVVYNLADFINKIAFGLVIWAAAVSSGAGARSR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTTGCTCTAACAGCTGTTGCCCTAATGGGTGTTACAACTGTAGCAAACGCTGCGACCGCT---ATGTTAGCTCAAGATGACTTCGTTGGAATATCTTTTTGGATAATTTCAATGGGTATGTTGGCTGCAACAGCTTTTTTCTTTATGGAGAGAAGCACTGTAAATCCA---GCATGGAAGACATCAGTAACAGTAGCAGGTCTAGTAACTGGTATTGCATTTATCCATTACATGTACATGAGAGATGTATGGGTA------------------------------AGTACT---------------------GGTGATTCACCAACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTGCCACTACAGATGATAGAATTTTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTAATAAG------AGT---GGAAACAAAGCTCTT---GTA---ACT---GCA---TTT---GGT---GCGATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCATTAGGTTATGTATTTGGTTATTTA---------------------------------------ACTGGTGGAGTAGATGCAAACACACTTAACGTAGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAGTTAGTTCTGGAGCTGGTGCAAGAAGCAGA--------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------LFALTAVALMGVTTVANAATA-MLAQDDFVGISFWIISMGMLAATAFFFMERSTVNP-AWKTSVTVAGLVTGIAFIHYMYMRDVWV----------ST-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAANK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANTLNVVYNLADFINKIAFGLVIWAAAVSSGAGARSR----------------------------------- [IV-Alpha8-SAR11/IMCC9063]_1112711320989 [IV-Alpha8-SAR11/IMCC9063] JCVI_ORF_1112711320989_GS121_Open_Ocean_2m jcvi|1112711320989| 1112711320989 JCVI ORF 1112711320989 1112711320989 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 29-sept-05 Open_Ocean/2m_depth/S_35.4_psu/GS121/International_water_between_Madagascar_and_South_Africa/Indian_Ocean Indian Ocean marine -29.348888 43.215557 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf CTGTTTGCACTTACAGTTGTGGCCCTAATGGGTGTTACAACAGTAGCAAACGCTGCGACCGCTATGTTAGCTCAAGATGACTTCGTTGGAATATCTTTTTGGGTAATTTCAATGGGTATGTTGGCTGCAACAGCTTTTTTCTTTATGGAGAGAAGTACTGTTAATCCAGCATGGAAGACATCAGTAACAGTAGCTGGTCTAGTAACTGGTATTGCCTTTATCCATTACATGTATATGAGGGATGTATGGGTATCTACTGGCGATTCACCAACAGTATATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTTTATTTAATTCTAGTAGCTGTAAGAAAAGCAAATTCTGGAATTTTCTGGAGATTGTTAATTGGTTCATTAGTAATGTTAATTGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCGTTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCTAATAAGAGTGGAAACAAAGCTCTTGTAACTGCGTTTGGTGCAATGAGAATGATTGTAACAGTAGGTTGGGCTATTTATCCATTAGGCTATGTATTCGGTTACCTAACTGGTGGTGTAGATGCTAACACACTTAATGTGGTTTACAACTTAGCTGACTTCATCAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAGTTAGTTCTGGAGCTGGTGCAAGAAGCAGA LFALTVVALMGVTTVANAATAMLAQDDFVGISFWVISMGMLAATAFFFMERSTVNPAWKTSVTVAGLVTGIAFIHYMYMRDVWVSTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEIFSGEAGKAANKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDANTLNVVYNLADFINKIAFGLVIWAAAVSSGAGARSR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTTGCACTTACAGTTGTGGCCCTAATGGGTGTTACAACAGTAGCAAACGCTGCGACCGCT---ATGTTAGCTCAAGATGACTTCGTTGGAATATCTTTTTGGGTAATTTCAATGGGTATGTTGGCTGCAACAGCTTTTTTCTTTATGGAGAGAAGTACTGTTAATCCA---GCATGGAAGACATCAGTAACAGTAGCTGGTCTAGTAACTGGTATTGCCTTTATCCATTACATGTATATGAGGGATGTATGGGTA------------------------------TCTACT---------------------GGCGATTCACCAACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTTTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAATTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGTTAATTGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCGTTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTAATAAG------AGT---GGAAACAAAGCTCTT---GTA---ACT---GCG---TTT---GGT---GCAATG---AGAATGATTGTAACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCATTAGGCTATGTATTCGGTTACCTA---------------------------------------ACTGGTGGTGTAGATGCTAACACACTTAATGTGGTTTACAACTTAGCTGACTTCATCAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAGTTAGTTCTGGAGCTGGTGCAAGAAGCAGA--------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------LFALTVVALMGVTTVANAATA-MLAQDDFVGISFWVISMGMLAATAFFFMERSTVNP-AWKTSVTVAGLVTGIAFIHYMYMRDVWV----------ST-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEI-----F--S-GEAGKAANK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANTLNVVYNLADFINKIAFGLVIWAAAVSSGAGARSR----------------------------------- [IV-Alpha8-SAR11/IMCC9063]_1105091138888 [IV-Alpha8-SAR11/IMCC9063] JCVI_ORF_1105091138888_GS031_Coastal_upwelling_12m jcvi|1105091138888| 1105091138888 JCVI ORF 1105091138888 1105091138888 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 10-FEB-2004 Coastal_upwelling/12m_depth/S_n.a/GS031/Upwelling/Fernandina_Island/Galapagos_Islands Pacific Ocean marine -0.3011111 -91.651665 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCTCTTACAGCTGTTGCCCTAATGGGTGTTACAACTGTAGCAAACGCTGCGACCGCTATGTTAGCTCAAGATGACTTTGTTGGAATTTCTTTTTGGGTAATTTCAATGGGTATGTTGGCTGCAACAGCGTTCTTCTTCATGGAAAGAAGTACTGTTAATCCTGCATGGAAGACATCAGTAACAGTAGCCGGTCTAGTAACTGGTATTGCATTTATCCATTACATGTACATGAGAGATGTATGGGTAAGCACAGGTGATTCACCAACAGTATATAGATATATTGACTGGTTAATTACTGTACCACTACAGATGATAGAATTTTATTTAATTCTAGTAGCTGTAAGAAAAGCAAATTCAGGAATTTTCTGGAGATTGCTAATTGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCTAACAAGAGTGGAAACAAAGCTCTTGTAACTGCGTTCGGTGCAATGAGAATGATTGTGACTGTAGGTTGGGCAATTTATCCATTAGGTTATGTATTTGGTTACCTAACTGGTGGTGTAGATGCTAACACACTTAACGTGGTATACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAGTTTCTGGTGGTGCTAGAGCAAGA MKKLKLFALTAVALMGVTTVANAATAMLAQDDFVGISFWVISMGMLAATAFFFMERSTVNPAWKTSVTVAGLVTGIAFIHYMYMRDVWVSTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAANKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDANTLNVVYNLADFINKIAFGLVIWAAAVSGGARAR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCTCTTACAGCTGTTGCCCTAATGGGTGTTACAACTGTAGCAAACGCTGCGACCGCT---ATGTTAGCTCAAGATGACTTTGTTGGAATTTCTTTTTGGGTAATTTCAATGGGTATGTTGGCTGCAACAGCGTTCTTCTTCATGGAAAGAAGTACTGTTAATCCT---GCATGGAAGACATCAGTAACAGTAGCCGGTCTAGTAACTGGTATTGCATTTATCCATTACATGTACATGAGAGATGTATGGGTA------------------------------AGCACA---------------------GGTGATTCACCAACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTACCACTACAGATGATAGAATTTTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAATTCA---GGAATT------------------------------------TTCTGGAGA---TTGCTAATTGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTAACAAG------AGT---GGAAACAAAGCTCTT---GTA---ACT---GCG---TTC---GGT---GCAATG---AGAATGATTGTGACTGTA---------------------------------------------------------------GGTTGG---------GCAATTTATCCATTAGGTTATGTATTTGGTTACCTA---------------------------------------ACTGGTGGTGTAGATGCTAACACACTTAACGTGGTATACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAGTTTCTGGTGGTGCTAGAGCAAGA--------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALTAVALMGVTTVANAATA-MLAQDDFVGISFWVISMGMLAATAFFFMERSTVNP-AWKTSVTVAGLVTGIAFIHYMYMRDVWV----------ST-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAANK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANTLNVVYNLADFINKIAFGLVIWAAAVSGGARAR------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_1105086971104 [IV-Alpha8-SAR11/IMCC9063] JCVI_ORF_1105086971104_GS028_Coastal_2m jcvi|1105086971104| 1105086971104 JCVI ORF 1105086971104 1105086971104 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 04-FEB-2004 Coastal/2m_depth/S_n.a/GS028/Coastal_Floreana/Galapagos_Islands Pacific Ocean marine -1.2169445 -90.319725 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAACTGTTTGCTCTTACAGCTGTTGCCCTAATGGGTGTTACAGGTGTAGCAAACGCTGAGACCGCGATGTTAGCTCAAGATGACTTTGTTGGAATTTCCTTTTGGGTAATTTCAATGGGTATGTTGGCTGCTACAGCATTCTTCTTTATGGAAAGAAGTACTGTTGCACCTGGCTGGAAAACGTCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGATGTATGGGTAAGTACTGGTGATTCACCAACAGTATACAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAATTTTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATTTTCTGGAGATTGTTAATTGGTTCATTAGTAATGTTAATCGGAGGATATCTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCTTCTAAAAGTGGAAACAAAGCTCTTGTTACCGCGTTTAGTGCAATGAGAATGATTGTTACAGTAGGTTGGGCTATTTATCCATTAGGTTACGTATTTGGTTACCTAACAGGTGGTGTAGATGCTAACTCACTTAACGTTGTTTACAACTTAGCTGACTTTATAAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAGTTAGTTCAGCTGGTGCAAGAAGCAGA MKKLKLFALTAVALMGVTGVANAETAMLAQDDFVGISFWVISMGMLAATAFFFMERSTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVSTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAASKSGNKALVTAFSAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAAVSSAGARSR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAACTGTTTGCTCTTACAGCTGTTGCCCTAATGGGTGTTACAGGTGTAGCAAACGCTGAGACCGCG---ATGTTAGCTCAAGATGACTTTGTTGGAATTTCCTTTTGGGTAATTTCAATGGGTATGTTGGCTGCTACAGCATTCTTCTTTATGGAAAGAAGTACTGTTGCACCT---GGCTGGAAAACGTCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGATGTATGGGTA------------------------------AGTACT---------------------GGTGATTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAATTTTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGTTAATCGGAGGATATCTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTTCTAAA------AGT---GGAAACAAAGCTCTT---GTT---ACC---GCG---TTT---AGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCATTAGGTTACGTATTTGGTTACCTA---------------------------------------ACAGGTGGTGTAGATGCTAACTCACTTAACGTTGTTTACAACTTAGCTGACTTTATAAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAGTTAGTTCA---GCTGGTGCAAGAAGCAGA--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALTAVALMGVTGVANAETA-MLAQDDFVGISFWVISMGMLAATAFFFMERSTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------ST-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-S-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAAVSS-AGARSR----------------------------------- [IV-Alpha8-EB80_69G02]_EU915857 [IV-Alpha8-EB80_69G02] APF1119_env_samples_EU915857 gi|229358596|gb|EU915857| Uncultured microorganism clone APF1119 putative proteorhodopsin gene, partial cds Uncultured microorganism clone APF1119 putative proteorhodopsin gene, partial cds EU915857 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample_at_200_m_depth Atlantic Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTAGCCGCTACTGTTTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTGTATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGGTGGGCAATCTAT MVAATVFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTTTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTGTATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGGTGG---------GCAATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_EF088543 [IV-Alpha8-EB80_69G02] clone_APF1119_EF088543 gi|126843310|gb|EF088543| Uncultured bacterium clone APF1119 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone APF1119 putative proteorhodopsin gene, partial cds. EF088543 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na 200m water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTAGCCGCTACTGTTTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTGTATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGGTGGGCAATCTATCCA MVAATVFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTTTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTGTATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGGTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_DQ903137 [IV-Alpha8-EB80_69G02] clone_A1S0104_DQ903137 gi|116294003|gb|DQ903137| Uncultured bacterium clone A1S0104 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A1S0104 putative proteorhodopsin gene, partial cds. DQ903137 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na South China Sea surface water (SCS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na ATGGTTGCCGCTACTGTTTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTGTATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGTTGGGCCATCTACCCA MVAATVFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTTTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTGTATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGTTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_EU915864 [IV-Alpha8-EB80_69G02] APF1131_env_samples_EU915864 gi|229358610|gb|EU915864| Uncultured microorganism clone APF1131 putative proteorhodopsin gene, partial cds Uncultured microorganism clone APF1131 putative proteorhodopsin gene, partial cds EU915864 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample_at_200_m_depth Atlantic Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTAGCCGCTACTGTGTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTGTATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATACGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGGTGGGCGATTTAT MVAATVFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTGTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTGTATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATACGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGGTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_EF088550 [IV-Alpha8-EB80_69G02] clone_APF1131_EF088550 gi|126843324|gb|EF088550| Uncultured bacterium clone APF1131 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone APF1131 putative proteorhodopsin gene, partial cds. EF088550 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na 200m water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTAGCCGCTACTGTGTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTGTATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATACGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGGTGGGCGATTTATCCA MVAATVFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTGTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTGTATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATACGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGGTGG---------GCGATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_DQ903144 [IV-Alpha8-EB80_69G02] clone_A1S0113_DQ903144 gi|116294017|gb|DQ903144| Uncultured bacterium clone A1S0113 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A1S0113 putative proteorhodopsin gene, partial cds. DQ903144 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na South China Sea surface water (SCS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na ATGGTAGCCGCTACTGTGTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTGTATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGCGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGGTGGGCAATTTACCCA MVAATVFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTGTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTGTATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGC---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGGTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_EU915767 [IV-Alpha8-EB80_69G02] PF75125_env_samples_EU915767 gi|229358416|gb|EU915767| Uncultured microorganism clone PF75125 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF75125 putative proteorhodopsin gene, partial cds EU915767 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTGGCCGCTACTGCATTCTTCTTCATGGAGAGAGGTACAGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGATATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTGTATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCACTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTCGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGATGGGCCATTTAT MLAATAFFFMERGTVAPGWKTSVTVAGLVTDIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGCATTCTTCTTCATGGAGAGAGGTACAGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGATATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTGTATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCACTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTCGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGATGG---------GCCATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFMERGTVAP-GWKTSVTVAGLVTDIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_EF079854 [IV-Alpha8-EB80_69G02] clone_ID11034_EF079854 gi|126361797|gb|EF079854| Uncultured bacterium clone ID11034 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID11034 putative proteorhodopsin gene, partial cds. EF079854 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na #na Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGCTGGCCGCTACTGTATTCTTCTTCATGGAGAGAGGTACAGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTGTATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGCTGGGCGATCTACCCA MLAATVFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGTATTCTTCTTCATGGAGAGAGGTACAGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTGTATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGCTGG---------GCGATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_DQ927022 [IV-Alpha8-EB80_69G02] clone_AT06016_DQ927022 gi|116294159|gb|DQ927022| Uncultured bacterium clone AT06016 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT06016 putative proteorhodopsin gene, partial cds. DQ927022 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGCTTGCCGCTACGGTGTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTGTATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGATGGGCCATCTACCCA MLAATVFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACGGTGTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTGTATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGATGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_EF088615 [IV-Alpha8-EB80_69G02] PF13015_env_samples_EF088615 gi|126843480|gb|EF088615| Uncultured bacterium clone PF13015 putative proteorhodopsin gene, partial cds Uncultured bacterium clone PF13015 putative proteorhodopsin gene, partial cds EF088615 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na surface_water_sample Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGCTGGCCGCTACTGCGTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTATATAGATATATCGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTCGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAGTGAGAATGATCGTAACAGTAGGGTGGGCTATCTATCCA MLAATAFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAVRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGCGTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTATATAGATATATCGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAGTG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGGTGG---------GCTATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AV-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_EF079843 [IV-Alpha8-EB80_69G02] clone_ID11014_EF079843 gi|126361775|gb|EF079843| Uncultured bacterium clone ID11014 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID11014 putative proteorhodopsin gene, partial cds. EF079843 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na #na Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGCTGGCCGCTACTGTGTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCTGGCTGGAAAACGTCAGTGACTGTTGCTGGTCTTGTAACTGGTATTGCGTTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTATATAGATATATTGACTGGTTAATAACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGTTGGGCCATCTATCCA MLAATVFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGTGTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCT---GGCTGGAAAACGTCAGTGACTGTTGCTGGTCTTGTAACTGGTATTGCGTTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTATATAGATATATTGACTGG------------------------TTAATAACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_EF100810 [IV-Alpha8-EB80_69G02] clone_ID29056_EF100810 gi|126513399|gb|EF100810| Uncultured bacterium clone ID29056 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID29056 putative proteorhodopsin gene, partial cds. EF100810 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-nov-07 #na surface water Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGCTTGCCGCTACTGTGTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTGTATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTCGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGGTGGGCGATCTACCCA MLAATVFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACTGTGTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTGTATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGGTGG---------GCGATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_EU915795 [IV-Alpha8-EB80_69G02] PF92061_env_samples_EU915795 gi|229358472|gb|EU915795| Uncultured microorganism clone PF92061 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF92061 putative proteorhodopsin gene, partial cds EU915795 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGCGTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTGTATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGATTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGGTGGGCCATTTAC MVAATAFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCGTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTGTATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGA---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGGTGG---------GCCATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_EU915765 [IV-Alpha8-EB80_69G02] PF75118_env_samples_EU915765 gi|229358412|gb|EU915765| Uncultured microorganism clone PF75118 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF75118 putative proteorhodopsin gene, partial cds EU915765 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGCGTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTGTATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCCGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACGCTTGGTTTCGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGGTGGGCAATCTAC MVAATAFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFRRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCGTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTGTATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCCGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACGCTTGGT---TTCGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGGTGG---------GCAATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FRR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_DQ887802 [IV-Alpha8-EB80_69G02] clone_PF10030_DQ887802 gi|116294304|gb|DQ887802| Uncultured bacterium clone PF10030 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF10030 putative proteorhodopsin gene, partial cds. DQ887802 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2007 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGGTGGCCGCTACTGCTTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTGTATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTGCACTTGGTTTCGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGGTGGGCCATCTACCCA MVAATAFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINAALGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCTTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTGTATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------GCACTTGGT---TTCGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGGTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------ALG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_EU224310 [IV-Alpha8-EB80_69G02] clone_1812212_EU224310 gi|164698792|gb|EU224310| Uncultured bacterium clone 1812212 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 1812212 putative proteorhodopsin gene, partial cds. EU224310 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2008 #na surface water sample Indian Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGGTGGCCGCTACTGCGTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTGTATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGATGGGCCATCTACCCA MVAATAFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCGTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTGTATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGATGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_EU915723 [IV-Alpha8-EB80_69G02] APF9049_env_samples_EU915723 gi|229358328|gb|EU915723| Uncultured microorganism clone APF9049 putative proteorhodopsin gene, partial cds Uncultured microorganism clone APF9049 putative proteorhodopsin gene, partial cds EU915723 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample_at_75_m_depth Atlantic Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACAGCGTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCCACAGTCTACAGATATATTGACTGGTTAGTTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTCGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGATGGGCCATATAC MVAATAFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLVTVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACAGCGTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCCACAGTCTACAGATATATTGACTGG------------------------TTAGTTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGATGG---------GCCATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LVTVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_EF088516 [IV-Alpha8-EB80_69G02] clone_APF9049_EF088516 gi|126843249|gb|EF088516| Uncultured bacterium clone APF9049 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone APF9049 putative proteorhodopsin gene, partial cds. EF088516 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na 75m water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTGGCCGCTACAGCGTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCCACAGTCTACAGATATATTGACTGGTTAGTTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTCGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGATGGGCCATATACCCA MVAATAFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLVTVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACAGCGTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCCACAGTCTACAGATATATTGACTGG------------------------TTAGTTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGATGG---------GCCATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LVTVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_EU915735 [IV-Alpha8-EB80_69G02] APF9009_env_samples_EU915735 gi|229358352|gb|EU915735| Uncultured microorganism clone APF9009 putative proteorhodopsin gene, partial cds Uncultured microorganism clone APF9009 putative proteorhodopsin gene, partial cds EU915735 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample_at_75_m_depth Atlantic Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGTGTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTGTATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTGGGATGGGCTATATAC MVAATVFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTGTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTGTATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTG---------------------------------------------------------------GGATGG---------GCTATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_EF088528 [IV-Alpha8-EB80_69G02] clone_APF9009_EF088528 gi|126843273|gb|EF088528| Uncultured bacterium clone APF9009 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone APF9009 putative proteorhodopsin gene, partial cds. EF088528 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na 75m water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTGGCCGCTACTGTGTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTGTATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTGGGATGGGCTATATACCCA MVAATVFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTGTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTGTATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTG---------------------------------------------------------------GGATGG---------GCTATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_DQ903142 [IV-Alpha8-EB80_69G02] clone_A1S0111_DQ903142 gi|116294013|gb|DQ903142| Uncultured bacterium clone A1S0111 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A1S0111 putative proteorhodopsin gene, partial cds. DQ903142 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na South China Sea surface water (SCS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na GTGGCCGCTACTGTTTTCTTCTTCATGGAAAGAGGAACTGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTGTATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGCTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGATGGGCTATATACCCA VAATVFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGGCCGCTACTGTTTTCTTCTTCATGGAAAGAGGAACTGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTGTATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGCTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGATGG---------GCTATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------VAATVFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_EF100800 [IV-Alpha8-EB80_69G02] clone_ID29026_EF100800 gi|126513379|gb|EF100800| Uncultured bacterium clone ID29026 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID29026 putative proteorhodopsin gene, partial cds. EF100800 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-nov-07 #na surface water Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGGTGGCCGCTACTGTTTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGACTCACCTACAGTGTATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGCTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTCGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGGTGGGCTATATACCCA MVAATVFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTTTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGACTCACCTACAGTGTATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGCTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTCGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGGTGG---------GCTATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_DQ927018 [IV-Alpha8-EB80_69G02] clone_AT06011_DQ927018 gi|116294151|gb|DQ927018| Uncultured bacterium clone AT06011 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT06011 putative proteorhodopsin gene, partial cds. DQ927018 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGGTTGCCGCTACTGCTTTCTTCTTCATGGAGAGATGTACAGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTGTACAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGCTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGGTGGGCCATTTACCCA MVAATAFFFMERCTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGCTTTCTTCTTCATGGAGAGATGTACAGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTGTACAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGCTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGGTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMERCTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_EF100794 [IV-Alpha8-EB80_69G02] clone_ID29014_EF100794 gi|126513367|gb|EF100794| Uncultured bacterium clone ID29014 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID29014 putative proteorhodopsin gene, partial cds. EF100794 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-nov-07 #na surface water Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGGTTGCCGCTACTGCTTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTCTACAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCGGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATCCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGTTGGGCAATCTACCCA MVAATAFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEISSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGCTTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTCTACAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCGGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TCC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGTTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----S--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_DQ887789 [IV-Alpha8-EB80_69G02] clone_PF10014_DQ887789 gi|116294278|gb|DQ887789| Uncultured bacterium clone PF10014 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF10014 putative proteorhodopsin gene, partial cds. DQ887789 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2007 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGGTGGCCGCTACTGCTTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTATATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTCGGTGCAATGAGAATGATCGTAACAGTAGGTTGGGCCATTTACCCA MVAATAFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCTTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTC---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGTTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_1105083855715 [IV-Alpha8-EB80_69G02] JCVI_ORF_1105083855715_GS026_Open_Ocean_2m jcvi|1105083855715| 1105083855715 JCVI ORF 1105083855715 1105083855715 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 01-FEB-2004 Open_Ocean/2m_depth/S_32.6_psu/GS026/134_miles_NE_of_Galapagos/Galapagos_Islands Pacific Ocean marine 1.2641667 -90.295 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAAATGTTTGCATTAGCAGCTGTTGCCCTTATCGGTATTACAGGTGTTGCAAACGCAGCGACCACTATGTTAGCTCAAGATGACTTTGTTGGGATATCTTTCTGGATAATCTCAATGGGTATGTTGGCTGCTACTGCTTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTGTATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTCGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCAGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGATGGGCTATTTACCCATTAGGTTACATTTTTGGTTACCTAACAGGTGGAGTAGACGCTGACTCACTAAACGTGATTTATAACTTAGCTGACTTTATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAGTAAGTTCAGCTGGTGCAAGAGCAAGA MKKLKMFALAAVALIGITGVANAATTMLAQDDFVGISFWIISMGMLAATAFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDADSLNVIYNLADFINKIAFGLVIWAAAVSSAGARAR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAAATGTTTGCATTAGCAGCTGTTGCCCTTATCGGTATTACAGGTGTTGCAAACGCAGCGACCACT---ATGTTAGCTCAAGATGACTTTGTTGGGATATCTTTCTGGATAATCTCAATGGGTATGTTGGCTGCTACTGCTTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTGTATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCAGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGATGG---------GCTATTTACCCATTAGGTTACATTTTTGGTTACCTA---------------------------------------ACAGGTGGAGTAGACGCTGACTCACTAAACGTGATTTATAACTTAGCTGACTTTATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAGTAAGTTCA---GCTGGTGCAAGAGCAAGA--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKMFALAAVALIGITGVANAATT-MLAQDDFVGISFWIISMGMLAATAFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDADSLNVIYNLADFINKIAFGLVIWAAAVSS-AGARAR----------------------------------- [IV-Alpha8-EB80_69G02]_1112733047921 [IV-Alpha8-EB80_69G02] JCVI_ORF_1112733047921 jcvi|1112733047921| 1112733047921 JCVI ORF 1112733047921 1112733047921 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 17-MAY-2004 Coastal/2m_depth/S_32.6_psu/GS049/Moorea/Outside_Cooks_Bay/Polynesia_Archipelagos Pacific Ocean marine -17.453056 -149.79889 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAAATGTTTGCATTAGCAGCTGTTGCCCTTATCGGTATTACAGGTGTTGCAAATGCAGCGACCACTATGTTAGCTCAAGATGACTTTGTTGGGATATCTTTCTGGATAATCTCAATGGGTATGTTGGCTGCTACTGCTTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTGTATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGATGGGCTATTTACCCATTAGGTTACATTTTTGGTTACCTAACAGGTGGAGTAGACGCTGACTCACTAAACGTGATTTACAACTTAGCTGACTTTATAACAAAATGC MKKLKMFALAAVALIGITGVANAATTMLAQDDFVGISFWIISMGMLAATAFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDADSLNVIYNLADFITKC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAAATGTTTGCATTAGCAGCTGTTGCCCTTATCGGTATTACAGGTGTTGCAAATGCAGCGACCACT---ATGTTAGCTCAAGATGACTTTGTTGGGATATCTTTCTGGATAATCTCAATGGGTATGTTGGCTGCTACTGCTTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTGTATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGATGG---------GCTATTTACCCATTAGGTTACATTTTTGGTTACCTA---------------------------------------ACAGGTGGAGTAGACGCTGACTCACTAAACGTGATTTACAACTTAGCTGACTTTATAACAAAATGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKMFALAAVALIGITGVANAATT-MLAQDDFVGISFWIISMGMLAATAFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDADSLNVIYNLADFITKC------------------------------------------------------- [IV-Alpha8-EB80_69G02]_1105092342758 [IV-Alpha8-EB80_69G02] JCVI_ORF_1105092342758 jcvi|1105092342758| 1105092342758 JCVI ORF 1105092342758 1105092342758 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 04-FEB-2004 Coastal/2m_depth/S_n.a/GS028/Coastal_Floreana/Galapagos_Islands Pacific Ocean marine -1.2169445 -90.319725 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAAATGTTTGCATTAGCAGCTGTTGCCCTTATCGGTATTACAGGTGTTGCAAACGCAGCGACCACTATGTTAGCTCAAGATGACTTTGTTGGGATATCTTTCTGGATAATCTCAATGGGTATGTTGGCTGCTACTGCTTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTCTACAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGATGGGCTATTTACCCATTAGGTTACATTTTTGGTTACCTAACAGGTGGAGTAGACGCTGACTCACTAAACGTGATTACAACTAGC MKKLKMFALAAVALIGITGVANAATTMLAQDDFVGISFWIISMGMLAATAFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDADSLNVITTS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAAATGTTTGCATTAGCAGCTGTTGCCCTTATCGGTATTACAGGTGTTGCAAACGCAGCGACCACT---ATGTTAGCTCAAGATGACTTTGTTGGGATATCTTTCTGGATAATCTCAATGGGTATGTTGGCTGCTACTGCTTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTCTACAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGATGG---------GCTATTTACCCATTAGGTTACATTTTTGGTTACCTA---------------------------------------ACAGGTGGAGTAGACGCTGACTCACTAAACGTGATTACAACTAGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------MKKLKMFALAAVALIGITGVANAATT-MLAQDDFVGISFWIISMGMLAATAFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDADSLNVITTS-------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_DQ927032 [IV-Alpha8-EB80_69G02] clone_AT06026_DQ927032 gi|116294179|gb|DQ927032| Uncultured bacterium clone AT06026 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT06026 putative proteorhodopsin gene, partial cds. DQ927032 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGCTAGCCGCTACGGCCTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACGGTGTATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGATGGGCTATTTACCCA MLAATAFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTAGCCGCTACGGCCTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACGGTGTATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGATGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_EU915871 [IV-Alpha8-EB80_69G02] APF1101_env_samples_EU915871 gi|229358624|gb|EU915871| Uncultured microorganism clone APF1101 putative proteorhodopsin gene, partial cds Uncultured microorganism clone APF1101 putative proteorhodopsin gene, partial cds EU915871 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample_at_200_m_depth Atlantic Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTTGCCGCTACTGCGTTCTTCTTCATGGAAAGAGGAACTGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTGTATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAATTTTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGGTGGGCAATATAC MLAATAFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACTGCGTTCTTCTTCATGGAAAGAGGAACTGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTGTATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAATTTTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGGTGG---------GCAATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_EF088557 [IV-Alpha8-EB80_69G02] clone_APF1101_EF088557 gi|126843338|gb|EF088557| Uncultured bacterium clone APF1101 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone APF1101 putative proteorhodopsin gene, partial cds. EF088557 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na 200m water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGCTTGCCGCTACTGCGTTCTTCTTCATGGAAAGAGGAACTGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTGTATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAATTTTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGGTGGGCAATATACCCA MLAATAFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACTGCGTTCTTCTTCATGGAAAGAGGAACTGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTGTATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAATTTTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGGTGG---------GCAATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_DQ927013 [IV-Alpha8-EB80_69G02] clone_AT06004_DQ927013 gi|116294141|gb|DQ927013| Uncultured bacterium clone AT06004 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT06004 putative proteorhodopsin gene, partial cds. DQ927013 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGCTAGCCGCTACGGTATTCTTCTTCATGGAAAGAGGAACTGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGACTCACCTACAGTCTATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTTTACTTAATTCTTGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGATATACATCCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTCGGATGGGCAATTTACCCA MLAATVFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTAGCCGCTACGGTATTCTTCTTCATGGAAAGAGGAACTGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGACTCACCTACAGTCTATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTTTACTTAATTCTTGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATCCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTC---------------------------------------------------------------GGATGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_EU915869 [IV-Alpha8-EB80_69G02] APF1147_env_samples_EU915869 gi|229358620|gb|EU915869| Uncultured microorganism clone APF1147 putative proteorhodopsin gene, partial cds Uncultured microorganism clone APF1147 putative proteorhodopsin gene, partial cds EU915869 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample_at_200_m_depth Atlantic Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTTGCCGCTACTGTGTTCTTCTTCATGGAAAGAGGAACTGTGGCTCCTGGCTGGGAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTATATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGGTGGGCCATTTAC MLAATVFFFMERGTVAPGWETSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACTGTGTTCTTCTTCATGGAAAGAGGAACTGTGGCTCCT---GGCTGGGAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGGTGG---------GCCATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFMERGTVAP-GWETSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_EF088555 [IV-Alpha8-EB80_69G02] clone_APF1147_EF088555 gi|126843334|gb|EF088555| Uncultured bacterium clone APF1147 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone APF1147 putative proteorhodopsin gene, partial cds. EF088555 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na 200m water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGCTTGCCGCTACTGTGTTCTTCTTCATGGAAAGAGGAACTGTGGCTCCTGGCTGGGAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTATATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGGTGGGCCATTTACCCA MLAATVFFFMERGTVAPGWETSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACTGTGTTCTTCTTCATGGAAAGAGGAACTGTGGCTCCT---GGCTGGGAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGGTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFMERGTVAP-GWETSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_EF088633 [IV-Alpha8-EB80_69G02] PF13009_env_samples_EF088633 gi|126843516|gb|EF088633| Uncultured bacterium clone PF13009 putative proteorhodopsin gene, partial cds Uncultured bacterium clone PF13009 putative proteorhodopsin gene, partial cds EF088633 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na surface_water_sample Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTGGCCGCTACTGTGTTCTTCTTCATGGAAAGAGGAACTGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTGTATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGGTGGGCAATTTACCCA MVAATVFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTGTTCTTCTTCATGGAAAGAGGAACTGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTGTATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGGTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_EU915744 [IV-Alpha8-EB80_69G02] PF75055_env_samples_EU915744 gi|229358370|gb|EU915744| Uncultured microorganism clone PF75055 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF75055 putative proteorhodopsin gene, partial cds EU915744 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTAGCCGCTACTGTTTTCTTCTTCATGGAAAGAGGAACTGCGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGCACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTGTATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTTGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCCACACTTGGTTTTGTGATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGGTGGGCTATATAT MVAATVFFFMERGTAAPGWKTSVTVAGLVTGIAFIHYMHMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTTTTCTTCTTCATGGAAAGAGGAACTGCGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGCACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTGTATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTTGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCC------------------ACACTTGGT---TTTGTGATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGGTGG---------GCTATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERGTAAP-GWKTSVTVAGLVTGIAFIHYMHMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_EU915755 [IV-Alpha8-EB80_69G02] PF75104_env_samples_EU915755 gi|229358392|gb|EU915755| Uncultured microorganism clone PF75104 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF75104 putative proteorhodopsin gene, partial cds EU915755 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTGGCCGCTACTGTATTCTTCTTCATGGAAAGAGGAACTGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACGGTCTATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGGAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTCGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGTTGGGCTATATAT MLAATVFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGTATTCTTCTTCATGGAAAGAGGAACTGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACGGTCTATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGGAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGTTGG---------GCTATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_EU915774 [IV-Alpha8-EB80_69G02] PF97516_env_samples_EU915774 gi|229358430|gb|EU915774| Uncultured microorganism clone PF97516 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF97516 putative proteorhodopsin gene, partial cds EU915774 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGCATTCTTCTTCATGGAAAGAGGAACTGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTGTATAGGTATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGTTGGGCGATTTAT MVAATAFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCATTCTTCTTCATGGAAAGAGGAACTGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTGTATAGGTATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_EU915860 [IV-Alpha8-EB80_69G02] APF1122_env_samples_EU915860 gi|229358602|gb|EU915860| Uncultured microorganism clone APF1122 putative proteorhodopsin gene, partial cds Uncultured microorganism clone APF1122 putative proteorhodopsin gene, partial cds EU915860 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample_at_200_m_depth Atlantic Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTTGCCGCTACTGTTTTCTTCTTCATGGAAAGAGGAACTGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGAGATGTATGGGTGACTACTGGTGATTCACCTACAGTGTATAGATATATTGACTGGTTAATTACTGTGCCGTTACAGATGATAGAATTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGATGGGCTATCTAC MVAATVFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTTTTCTTCTTCATGGAAAGAGGAACTGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGAGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTGTATAGATATATTGACTGG------------------------TTAATTACTGTGCCGTTACAGATGATAGAATTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGATGG---------GCTATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_EF088546 [IV-Alpha8-EB80_69G02] clone_APF1122_EF088546 gi|126843316|gb|EF088546| Uncultured bacterium clone APF1122 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone APF1122 putative proteorhodopsin gene, partial cds. EF088546 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na 200m water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTTGCCGCTACTGTTTTCTTCTTCATGGAAAGAGGAACTGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGAGATGTATGGGTGACTACTGGTGATTCACCTACAGTGTATAGATATATTGACTGGTTAATTACTGTGCCGTTACAGATGATAGAATTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGATGGGCTATCTACCCA MVAATVFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTTTTCTTCTTCATGGAAAGAGGAACTGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGAGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTGTATAGATATATTGACTGG------------------------TTAATTACTGTGCCGTTACAGATGATAGAATTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGATGG---------GCTATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_DQ887787 [IV-Alpha8-EB80_69G02] clone_PF10012_DQ887787 gi|116294274|gb|DQ887787| Uncultured bacterium clone PF10012 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF10012 putative proteorhodopsin gene, partial cds. DQ887787 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2007 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGGTTGCCGCTACTGTATTCTTCTTCATGGAAAGAGGAACTGTGGCTCCTGGCTGGAAAACGGCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTATATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTATTTAATTCTAGCAGCTGTAAGAAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATCGGCTCATTAGTAATGTTAATCGGTGGATATCTAGGAGAAGCTGGATATATCAATGCTACACTTGGTTTCGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGTTGGGCCATCTACCCA MVAATVFFFMERGTVAPGWKTAVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTATTCTTCTTCATGGAAAGAGGAACTGTGGCTCCT---GGCTGGAAAACGGCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTATTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGCTCATTAGTAATGTTAATCGGTGGATATCTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGTTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERGTVAP-GWKTAVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_DQ887794 [IV-Alpha8-EB80_69G02] clone_PF10020_DQ887794 gi|116294288|gb|DQ887794| Uncultured bacterium clone PF10020 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF10020 putative proteorhodopsin gene, partial cds. DQ887794 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2007 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGGTTGCCGCTACTGTATTCTTCTTCATGGAAAGAGGAACTGTGGCTCCTGGCTGGAAAACGGCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTATATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTATTTAATTCTAGCAGCTGTAAGAAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATCGGCTCATTAGTAATGTTAATCGGTGGATATCTAGGAGAAGCTGGATATATCAATGCTACACTTGGTTTCGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGTTGGGCCATCTACCCA MVAATVFFFMERGTVAPGWKTAVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTATTCTTCTTCATGGAAAGAGGAACTGTGGCTCCT---GGCTGGAAAACGGCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTATTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGCTCATTAGTAATGTTAATCGGTGGATATCTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGTTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERGTVAP-GWKTAVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_EF100805 [IV-Alpha8-EB80_69G02] clone_ID29032_EF100805 gi|126513389|gb|EF100805| Uncultured bacterium clone ID29032 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID29032 putative proteorhodopsin gene, partial cds. EF100805 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-nov-07 #na surface water Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGCTGGCCGCTACTGTGTTCTTCTTCATGGAAAGAGGAACTGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTACATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTGTATAGATATATTGATTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGGTGGGCTATCTACCCA MLAATVFFFMERGTVAPGWKTSVTVAGLVTGITFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGTGTTCTTCTTCATGGAAAGAGGAACTGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTACATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTGTATAGATATATTGATTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGGTGG---------GCTATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFMERGTVAP-GWKTSVTVAGLVTGITFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_EF100802 [IV-Alpha8-EB80_69G02] clone_ID29028_EF100802 gi|126513383|gb|EF100802| Uncultured bacterium clone ID29028 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID29028 putative proteorhodopsin gene, partial cds. EF100802 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-nov-07 #na surface water Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGCTGGCCGCTACTGCGTTCTTCTTCATGGAAAGAGGAACTGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTGTATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGTTGGGCCATCTACCCA MLAATAFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGCGTTCTTCTTCATGGAAAGAGGAACTGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTGTATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGTTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_EF079860 [IV-Alpha8-EB80_69G02] clone_ID11061_EF079860 gi|126361809|gb|EF079860| Uncultured bacterium clone ID11061 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID11061 putative proteorhodopsin gene, partial cds. EF079860 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na #na Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGGTGGCCGCTACTGCGTTCTTCTTCATGGAAAGAGGAACTGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTGTATAGATATATTGACTGGTTAATTACTGTGCCACTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCCGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACGAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGATGGGCGATTTACCCA MVAATAFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNEALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCGTTCTTCTTCATGGAAAGAGGAACTGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTGTATAGATATATTGACTGG------------------------TTAATTACTGTGCCACTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCC------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACGAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGATGG---------GCGATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNEAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_DQ903149 [IV-Alpha8-EB80_69G02] clone_A1S0118_DQ903149 gi|116294027|gb|DQ903149| Uncultured bacterium clone A1S0118 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A1S0118 putative proteorhodopsin gene, partial cds. DQ903149 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na South China Sea surface water (SCS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na ATGGTGGCCGCTACTGCATTCTTCTTCATGGAAAGAGGAACTGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTATATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGATGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGATGGGCAATCTATCCA MVAATAFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCATTCTTCTTCATGGAAAGAGGAACTGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGATGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGATGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_DQ927023 [IV-Alpha8-EB80_69G02] clone_AT06017_DQ927023 gi|116294161|gb|DQ927023| Uncultured bacterium clone AT06017 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT06017 putative proteorhodopsin gene, partial cds. DQ927023 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ACGGTGGCCGCTACGGCTTTCTTCTTCATGGAAAGAGGAACTGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTGTATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGGTGGGCAATCTACCCA TVAATAFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGGTGGCCGCTACGGCTTTCTTCTTCATGGAAAGAGGAACTGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTGTATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGGTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------TVAATAFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_EF107105 [IV-Alpha8-EB80_69G02] EB80_69G07_genomic_EF107105 gi|119713354|gb|EF107105| Uncultured marine bacterium EB80 69G07 genomic sequence Uncultured marine bacterium EB80 69G07 genomic sequence EF107105 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:415442 genomic_DNA other 16-nov-07 #na coastal_ocean/Monterey_Bay/80m_below_sea_surface Pacific Ocean marine 36.8 -122 Proteorhodopsin photosystem gene clusters exhibit coevolutionary trends and shared ancestry among diverse marine microbial phyla McCarren,J. and DeLong,E.F. Environ. Microbiol. 9 (4), 846858 (2007) 17359257 metagenomic ATGAAAAAACTTAAAATGTTTGCATTAGCAGCTGTTGCCCTTATCGGTATTACAGGTGTTGCAAACGCAGCGACCACTATGTTAGCTCAAGATGACTTTGTTGGGATATCTTTCTGGATAATCTCAATGGGTATGTTGGCTGCTACTGCTTTCTTCTTCATGGAAAGAGGAACTGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTGTATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATCTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGATGGGCTATTTACCCATTAGGTTACATTTTTGGTTACCTAACAGGTGGAGTAGACGCTGACTCACTAAACGTGATTTACAACTTAGCTGACTTTATTAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAGTAAGTTCAGCTGGTGCAAGAGCAAGA MKKLKMFALAAVALIGITGVANAATTMLAQDDFVGISFWIISMGMLAATAFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDADSLNVIYNLADFINKIAFGLVIWAAAVSSAGARAR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAAATGTTTGCATTAGCAGCTGTTGCCCTTATCGGTATTACAGGTGTTGCAAACGCAGCGACCACT---ATGTTAGCTCAAGATGACTTTGTTGGGATATCTTTCTGGATAATCTCAATGGGTATGTTGGCTGCTACTGCTTTCTTCTTCATGGAAAGAGGAACTGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTGTATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATCTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGATGG---------GCTATTTACCCATTAGGTTACATTTTTGGTTACCTA---------------------------------------ACAGGTGGAGTAGACGCTGACTCACTAAACGTGATTTACAACTTAGCTGACTTTATTAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAGTAAGTTCA---GCTGGTGCAAGAGCAAGA--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKMFALAAVALIGITGVANAATT-MLAQDDFVGISFWIISMGMLAATAFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDADSLNVIYNLADFINKIAFGLVIWAAAVSS-AGARAR----------------------------------- [IV-Alpha8-EB80_69G02]_1112710990611 [IV-Alpha8-EB80_69G02] JCVI_ORF_1112710990611_GS111_Open_Ocean_2m jcvi|1112710990611| 1112710990611 JCVI ORF 1112710990611 1112710990611 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 07-AUG-2005 Open_Ocean/2m_depth/S_32.3_psu/GS111/Indian_Ocean/Indian_Ocean Indian Ocean marine -9.596945 84.1975 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf GGTATTACAGGTGTTGCAAACGCAGCGACCACTATGTTAGCTCAAGATGACTTTGTTGGGATATCTTTCTGGATAATCTCAATGGGTATGTTGGCTGCTACTGCTTTCTTCTTCATGGAAAGAGGAACTGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTATATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGATGGGCTATTTACCCATTAGGTTATATTTTTGGTTACCTAACAGGTGGAGTAGACGCTGACTCACTAAACGTGATTTATAACTTAGCTGACTTTATTAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAGTAAGTTCAGCTGGTGCAAGAGCAAGA GITGVANAATTMLAQDDFVGISFWIISMGMLAATAFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDADSLNVIYNLADFINKIAFGLVIWAAAVSSAGARAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTATTACAGGTGTTGCAAACGCAGCGACCACT---ATGTTAGCTCAAGATGACTTTGTTGGGATATCTTTCTGGATAATCTCAATGGGTATGTTGGCTGCTACTGCTTTCTTCTTCATGGAAAGAGGAACTGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGATGG---------GCTATTTACCCATTAGGTTATATTTTTGGTTACCTA---------------------------------------ACAGGTGGAGTAGACGCTGACTCACTAAACGTGATTTATAACTTAGCTGACTTTATTAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAGTAAGTTCA---GCTGGTGCAAGAGCAAGA--------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------GITGVANAATT-MLAQDDFVGISFWIISMGMLAATAFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDADSLNVIYNLADFINKIAFGLVIWAAAVSS-AGARAR----------------------------------- [IV-Alpha8-EB80_69G02]_1105164997904 [IV-Alpha8-EB80_69G02] JCVI_ORF_1105164997904_GS016_Coastal_Sea_2m jcvi|1105164997904| 1105164997904 JCVI ORF 1105164997904 1105164997904 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 08-janv-04 Coastal_Sea/2m_depth/S_35.8_psu/GS016/Gulf_of_Mexico/Caribbean_Sea Caribbean Sea marine 24.174723 -84.344444 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAAATGTTTGCATTAGCAGCTGTTGCCCTTATCGGTATTACAGGTGTTGCAAACGCAGCGACCACTATGTTAGCTCAAGATGACTTTGTTGGGATATCTTTCTGGATAATCTCAATGGGTATGTTGGCTGCTACTGCTTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTGTATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGATGGGCTATTTACCCATTAGGTTACATTTTTGGTTACCTAACAGGTGGAGTAGACGCTGACTCACTAAACGTGATTTACAACTTAGCTGACTTTATTAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAGTAAGTTCAGCTGGTGCAAGAGCAAGA MKKLKMFALAAVALIGITGVANAATTMLAQDDFVGISFWIISMGMLAATAFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDADSLNVIYNLADFINKIAFGLVIWAAAVSSAGARAR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAAATGTTTGCATTAGCAGCTGTTGCCCTTATCGGTATTACAGGTGTTGCAAACGCAGCGACCACT---ATGTTAGCTCAAGATGACTTTGTTGGGATATCTTTCTGGATAATCTCAATGGGTATGTTGGCTGCTACTGCTTTCTTCTTCATGGAGAGAGGTACAGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTGTATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGATGG---------GCTATTTACCCATTAGGTTACATTTTTGGTTACCTA---------------------------------------ACAGGTGGAGTAGACGCTGACTCACTAAACGTGATTTACAACTTAGCTGACTTTATTAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAGTAAGTTCA---GCTGGTGCAAGAGCAAGA--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKMFALAAVALIGITGVANAATT-MLAQDDFVGISFWIISMGMLAATAFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDADSLNVIYNLADFINKIAFGLVIWAAAVSS-AGARAR----------------------------------- [IV-Alpha8-EB80_69G02]_1105161901078 [IV-Alpha8-EB80_69G02] JCVI_ORF_1105161901078_GS026_Open_Ocean_2m jcvi|1105161901078| 1105161901078 JCVI ORF 1105161901078 1105161901078 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 01-FEB-2004 Open_Ocean/2m_depth/S_32.6_psu/GS026/134_miles_NE_of_Galapagos/Galapagos_Islands Pacific Ocean marine 1.2641667 -90.295 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAAATGTTTGCATTAGCAGCTGTTGCCCTTATCGGTATTACAGGTGTTGCAAACGCAGCGACCACTATGTTAGCTCAAGATGACTTTGTTGGGATATCTTTCTGGATAATCTCAATGGGTATGTTGGCTGCTACTGCTTTCTTCTTCATGGAAAGAGGAACTGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTGTATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGATGGGCTATTTACCCATTAGGTTACATTTTCGGTTACCTAACAGGTGGAGTAGACGCTGACTCACTAAACGTGATTTACAACTTAGCTGACTTTATTAACAAAATTGCATTCGGTCTAGTAATTTGGGCTGCTGCAGTAAGTTCAGCTGGTGCAAGAGCAAGA MKKLKMFALAAVALIGITGVANAATTMLAQDDFVGISFWIISMGMLAATAFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDADSLNVIYNLADFINKIAFGLVIWAAAVSSAGARAR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAAATGTTTGCATTAGCAGCTGTTGCCCTTATCGGTATTACAGGTGTTGCAAACGCAGCGACCACT---ATGTTAGCTCAAGATGACTTTGTTGGGATATCTTTCTGGATAATCTCAATGGGTATGTTGGCTGCTACTGCTTTCTTCTTCATGGAAAGAGGAACTGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTGTATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGATGG---------GCTATTTACCCATTAGGTTACATTTTCGGTTACCTA---------------------------------------ACAGGTGGAGTAGACGCTGACTCACTAAACGTGATTTACAACTTAGCTGACTTTATTAACAAAATTGCATTCGGTCTAGTAATTTGGGCTGCTGCAGTAAGTTCA---GCTGGTGCAAGAGCAAGA--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKMFALAAVALIGITGVANAATT-MLAQDDFVGISFWIISMGMLAATAFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDADSLNVIYNLADFINKIAFGLVIWAAAVSS-AGARAR----------------------------------- [IV-Alpha8-EB80_69G02]_1105136815623 [IV-Alpha8-EB80_69G02] JCVI_ORF_1105136815623_GS001b_Open_Ocean_5m jcvi|1105136815623| 1105136815623 JCVI ORF 1105136815623 1105136815623 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.8_3.0 other #na 15-MAY-2003 Open_Ocean/5m_depth/S_36.7_psu/GS001b/Hydrostation_S/Sargasso_Sea Sargasso Sea marine 32.166668 -64.5 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAAATGTTTGCATTAGCAGCTGTTGCCCTTATCGGTATTACAGGTGTTGCAAACGCAGCGACCACTATGTTAGCTCAAGATGACTTTGTTGGAATATCTTTCTGGATAATTTCAATGGGTATGTTGGCTGCAACTGCTTTCTTCTTCATGGAGAGAGGTACAGTAGCTGCTGGCTGGAAAACGTCAGTAACTGTAGCTGGTCTAGTAACTGGTATTGCATTCATCCATTACATGTACATGAGAGATGTGTGGGTGACTACTGGTGATTCACCAACAGTATATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCTGCTATTAGAAAAGCAAACTCTGGAATGTTTTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGATGGGCTATTTATCCGTTAGGTTACGTTTTCGGTTACCTAACAGGTGGAGTAGACGCAGACTCACTAAACGTGATTTACAACTTAGCTGACTTTATTAATAAAATTGCATTCGGTCTGGTAATCTGGGCTGCTGCAGTAAGTTCAGCTGGTGCAAGAGCTGGAAACAGA MKKLKMFALAAVALIGITGVANAATTMLAQDDFVGISFWIISMGMLAATAFFFMERGTVAAGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAIRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDADSLNVIYNLADFINKIAFGLVIWAAAVSSAGARAGNR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAAATGTTTGCATTAGCAGCTGTTGCCCTTATCGGTATTACAGGTGTTGCAAACGCAGCGACCACT---ATGTTAGCTCAAGATGACTTTGTTGGAATATCTTTCTGGATAATTTCAATGGGTATGTTGGCTGCAACTGCTTTCTTCTTCATGGAGAGAGGTACAGTAGCTGCT---GGCTGGAAAACGTCAGTAACTGTAGCTGGTCTAGTAACTGGTATTGCATTCATCCATTACATGTACATGAGAGATGTGTGGGTG------------------------------ACTACT---------------------GGTGATTCACCAACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCTGCT---------ATT---AGAAAAGCAAACTCT---GGAATG------------------------------------TTTTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGATGG---------GCTATTTATCCGTTAGGTTACGTTTTCGGTTACCTA---------------------------------------ACAGGTGGAGTAGACGCAGACTCACTAAACGTGATTTACAACTTAGCTGACTTTATTAATAAAATTGCATTCGGTCTGGTAATCTGGGCTGCTGCAGTAAGTTCA---GCTGGTGCAAGAGCTGGAAACAGA--------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKMFALAAVALIGITGVANAATT-MLAQDDFVGISFWIISMGMLAATAFFFMERGTVAA-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---I-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDADSLNVIYNLADFINKIAFGLVIWAAAVSS-AGARAGNR--------------------------------- [IV-Alpha8-EB80_69G02]_1105138141716 [IV-Alpha8-EB80_69G02] JCVI_ORF_1105138141716_GS015_Coastal_2m jcvi|1105138141716| 1105138141716 JCVI ORF 1105138141716 1105138141716 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 08-janv-04 Coastal/2m_depth/S_36_psu/GS015/Off_Key_West/FL/Caribbean_Sea Caribbean Sea marine 24.488333 -83.07 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAAATGTTTGCATTAGCAGCTGTTGCCCTTATCGGTATTACAGGTGTTGCAAACGCGGCGACCACTATGTTAGCTCAAGATGACTTTGTTGGGATATCTTTCTGGATAATTTCAATGGGTATGTTGGCTGCAACTGCTTTCTTCTTCATGGAGAGAGGTACAGTAGCTGCTGGCTGGAAAACGTCAGTAACTGTAGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGAGATGTATGGGTGACTACTGGTGATTCACCAACAGTATACAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCTGCTATTAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATTGTAACAGTAGGATGGGCTATTTACCCGTTAGGCTACGTTTTTGGTTACCTAACAGGTGGAGTAGACGCTGACTCACTAAACGTGATTTACAACTTAGCTGACTTTATTAACAAAATTGCATTTGGTCTGGTAATCTGGGCTGCTGCAGTAAGTTCAGCTGGTGCAAGAGCAAGA MKKLKMFALAAVALIGITGVANAATTMLAQDDFVGISFWIISMGMLAATAFFFMERGTVAAGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAIRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDADSLNVIYNLADFINKIAFGLVIWAAAVSSAGARAR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAAATGTTTGCATTAGCAGCTGTTGCCCTTATCGGTATTACAGGTGTTGCAAACGCGGCGACCACT---ATGTTAGCTCAAGATGACTTTGTTGGGATATCTTTCTGGATAATTTCAATGGGTATGTTGGCTGCAACTGCTTTCTTCTTCATGGAGAGAGGTACAGTAGCTGCT---GGCTGGAAAACGTCAGTAACTGTAGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGAGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCTGCT---------ATT---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTAACAGTA---------------------------------------------------------------GGATGG---------GCTATTTACCCGTTAGGCTACGTTTTTGGTTACCTA---------------------------------------ACAGGTGGAGTAGACGCTGACTCACTAAACGTGATTTACAACTTAGCTGACTTTATTAACAAAATTGCATTTGGTCTGGTAATCTGGGCTGCTGCAGTAAGTTCA---GCTGGTGCAAGAGCAAGA--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKMFALAAVALIGITGVANAATT-MLAQDDFVGISFWIISMGMLAATAFFFMERGTVAA-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---I-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDADSLNVIYNLADFINKIAFGLVIWAAAVSS-AGARAR----------------------------------- [IV-Alpha8-EB80_69G02]_1105125800964 [IV-Alpha8-EB80_69G02] JCVI_ORF_1105125800964_GS049_Coastal_2m jcvi|1105125800964| 1105125800964 JCVI ORF 1105125800964 1105125800964 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 17-MAY-2004 Coastal/2m_depth/S_32.6_psu/GS049/Moorea/Outside_Cooks_Bay/Polynesia_Archipelagos Pacific Ocean marine -17.453056 -149.79889 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf GACCGGTTGCAGTGCAACGCAGCGACCACAATGTTAGCTCAAGATGACTTTGTTGGGATATCTTTCTGGATAATCTCAATGGGTATGTTGGCTGCTACTGCTTTTTTCTTTATGGAGAGAGGTACAGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCAACAGTATATAGATATATTGACTGGTTAATTACTGTGCCTTTACAGATGATAGAGTTCTACTTGATTCTAGCTGCTATTAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTGGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGATGGGCTATTTACCCATTAGGTTACATTTTTGGTTACCTAACAGGTGGAGTAGACGCTGACTCACTAAACGTGATTTACAACTTAGCTGACTTTATTAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAGTAAGTCAAGCTGGTGCTAGAGCAAGA DRLQCNAATTMLAQDDFVGISFWIISMGMLAATAFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAIRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDADSLNVIYNLADFINKIAFGLVIWAAAVSQAGARAR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACCGGTTGCAGTGCAACGCAGCGACCACA---ATGTTAGCTCAAGATGACTTTGTTGGGATATCTTTCTGGATAATCTCAATGGGTATGTTGGCTGCTACTGCTTTTTTCTTTATGGAGAGAGGTACAGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCAACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTGCCTTTACAGATGATAGAGTTCTACTTGATTCTAGCTGCT---------ATT---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTGGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGATGG---------GCTATTTACCCATTAGGTTACATTTTTGGTTACCTA---------------------------------------ACAGGTGGAGTAGACGCTGACTCACTAAACGTGATTTACAACTTAGCTGACTTTATTAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAGTAAGTCAA---GCTGGTGCTAGAGCAAGA--------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------DRLQCNAATT-MLAQDDFVGISFWIISMGMLAATAFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---I-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDADSLNVIYNLADFINKIAFGLVIWAAAVSQ-AGARAR----------------------------------- [IV-Alpha8-EB80_69G02]_1105114753738 [IV-Alpha8-EB80_69G02] JCVI_ORF_1105114753738_GS018_Open_Ocean_2m jcvi|1105114753738| 1105114753738 JCVI ORF 1105114753738 1105114753738 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 10-janv-04 Open_Ocean/2m_depth/S_35.4_psu/GS018/Rosario_Bank/Caribbean_Sea Caribbean Sea marine 18.036667 -83.78472 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TACGGTTGGAGCAGCTGTTGCCTTATCGGTATTACAGGTGTTGCAAACGCAGCGACCACTATGTTAGCTCAAGATGACTTTGTTGGGATATCTTTCTGGATAATCTCAATGGGTATGTTGGCTGCTACTGCTTTCTTCTTCATGGAAAGAGGAACTGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTGTATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGATGGGCTATTTACCCATTAGGTTATATTTTTGGTTACCTAACAGGTGGAGTAGACGCTGACTCACTAAACGTGATTTATAACTTAGCTGACTTTATTAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAGTAAGTTCAGCTGGTGCAAGAGCAAGA YGWSSCCLIGITGVANAATTMLAQDDFVGISFWIISMGMLAATAFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDADSLNVIYNLADFINKIAFGLVIWAAAVSSAGARAR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACGGTTGGAGCAGCTGTTGCCTTATCGGTATTACAGGTGTTGCAAACGCAGCGACCACT---ATGTTAGCTCAAGATGACTTTGTTGGGATATCTTTCTGGATAATCTCAATGGGTATGTTGGCTGCTACTGCTTTCTTCTTCATGGAAAGAGGAACTGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTGTATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGATGG---------GCTATTTACCCATTAGGTTATATTTTTGGTTACCTA---------------------------------------ACAGGTGGAGTAGACGCTGACTCACTAAACGTGATTTATAACTTAGCTGACTTTATTAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAGTAAGTTCA---GCTGGTGCAAGAGCAAGA--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------YGWSSCCLIGITGVANAATT-MLAQDDFVGISFWIISMGMLAATAFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDADSLNVIYNLADFINKIAFGLVIWAAAVSS-AGARAR----------------------------------- [IV-Alpha8-EB80_69G02]_1105098120186 [IV-Alpha8-EB80_69G02] JCVI_ORF_1105098120186_GS021_Coastal_2m jcvi|1105098120186| 1105098120186 JCVI ORF 1105098120186 1105098120186 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 19-janv-04 Coastal/2m_depth/S_30.7_psu/GS021/Gulf_of_Panama/Eastern_Tropical_Pacific Pacific Ocean marine 8.129167 -79.69111 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf GTGCCGTCATCGGTATACAGGTGTGCAAACGCAGCGACCACTATGTTAGCTCAAGATGACTTTGTTGGGATATCTTTCTGGATAATCTCAATGGGTATGTTGGCTGCTACTGCTTTATTCTTCATGGAAAGAGGAACTGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGAGATGTATGGGTGACTACTGGTGACTCACCTACAGTGTATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTAGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGATGGGCTATTTACCCATTAGGTTACATTTTTGGTTACCTAACAGGTGGAGTAGACGCTGACTCACTAAACGTGATTTATAACTTAGCTGACTTTATTAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAGTAAGTTCAGCTGGTGCAAGAGCAAGA VPSSVYRCANAATTMLAQDDFVGISFWIISMGMLAATALFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDADSLNVIYNLADFINKIAFGLVIWAAAVSSAGARAR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGCCGTCATCGGTATACAGGTGTGCAAACGCAGCGACCACT---ATGTTAGCTCAAGATGACTTTGTTGGGATATCTTTCTGGATAATCTCAATGGGTATGTTGGCTGCTACTGCTTTATTCTTCATGGAAAGAGGAACTGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGAGATGTATGGGTG------------------------------ACTACT---------------------GGTGACTCACCTACAGTGTATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGATGG---------GCTATTTACCCATTAGGTTACATTTTTGGTTACCTA---------------------------------------ACAGGTGGAGTAGACGCTGACTCACTAAACGTGATTTATAACTTAGCTGACTTTATTAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAGTAAGTTCA---GCTGGTGCAAGAGCAAGA--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------VPSSVYRCANAATT-MLAQDDFVGISFWIISMGMLAATALFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDADSLNVIYNLADFINKIAFGLVIWAAAVSS-AGARAR----------------------------------- [IV-Alpha8-EB80_69G02]_1105130479112 [IV-Alpha8-EB80_69G02] JCVI_ORF_1105130479112_GS021_Coastal_2m jcvi|1105130479112| 1105130479112 JCVI ORF 1105130479112 1105130479112 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 19-janv-04 Coastal/2m_depth/S_30.7_psu/GS021/Gulf_of_Panama/Eastern_Tropical_Pacific Pacific Ocean marine 8.129167 -79.69111 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf CTAGCTAATAAACTTATAAAAACTTACTTAAGGAGGGGAGTTTTTATGAAAAAACTTAAAATGTTTGCATTAGCAGCTGTTGCTTATCGGTATTACAGGTGTGCAAACGCAGCGACCACTATGTTAGCTCAAGATGACTTTGTTGGGATATCTTTCTGGATAATCTCAATGAGTATGTTAGCTGCTACTGCTTTCTTCTTCATGGAAAGAGGAACTGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACATACAGTGTATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTATTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGATGGGCTATTTACCCATTAGGTTACATTTTTGGTTACCTAACAGGTGGAGTAGACGCTGACTCACTAAACGTGATTTACAACTTAGCTGACTTCATTAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAGTAAGTTCAGCTGGTGCAAGAGCAAGA LANKLIKTYLRRGVFMKKLKMFALAAVAYRYYRCANAATTMLAQDDFVGISFWIISMSMLAATAFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSHTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDADSLNVIYNLADFINKIAFGLVIWAAAVSSAGARAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGCTAATAAACTTATAAAAACTTACTTAAGGAGGGGAGTTTTTATGAAAAAACTTAAAATGTTTGCATTAGCAGCTGTTGCT---TATCGGTATTACAGGTGTGCAAACGCAGCGACCACT---ATGTTAGCTCAAGATGACTTTGTTGGGATATCTTTCTGGATAATCTCAATGAGTATGTTAGCTGCTACTGCTTTCTTCTTCATGGAAAGAGGAACTGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACATACAGTGTATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTATTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGATGG---------GCTATTTACCCATTAGGTTACATTTTTGGTTACCTA---------------------------------------ACAGGTGGAGTAGACGCTGACTCACTAAACGTGATTTACAACTTAGCTGACTTCATTAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAGTAAGTTCA---GCTGGTGCAAGAGCAAGA--------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------LANKLIKTYLRRGVFMKKLKMFALAAVA-YRYYRCANAATT-MLAQDDFVGISFWIISMSMLAATAFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSHTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDADSLNVIYNLADFINKIAFGLVIWAAAVSS-AGARAR----------------------------------- [IV-Alpha8-EB80_69G02]_EU915865 [IV-Alpha8-EB80_69G02] APF1134_env_samples_EU915865 gi|229358612|gb|EU915865| Uncultured microorganism clone APF1134 putative proteorhodopsin gene, partial cds Uncultured microorganism clone APF1134 putative proteorhodopsin gene, partial cds EU915865 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample_at_200_m_depth Atlantic Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTGGCCGCTACTGCATTCTTCTTCATGGAGAGAGGTACGGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTGTATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTAGGTTGGGCGATATAC MLAATAFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGCATTCTTCTTCATGGAGAGAGGTACGGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTGTATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCGATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_EF088551 [IV-Alpha8-EB80_69G02] clone_APF1134_EF088551 gi|126843326|gb|EF088551| Uncultured bacterium clone APF1134 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone APF1134 putative proteorhodopsin gene, partial cds. EF088551 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na 200m water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGCTGGCCGCTACTGCATTCTTCTTCATGGAGAGAGGTACGGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGACTACTGGTGATTCACCTACAGTGTATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTAGGTTGGGCGATATACCCA MLAATAFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGCATTCTTCTTCATGGAGAGAGGTACGGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------ACTACT---------------------GGTGATTCACCTACAGTGTATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCGATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_EU915854 [IV-Alpha8-EB80_69G02] APF1113_env_samples_EU915854 gi|229358590|gb|EU915854| Uncultured microorganism clone APF1113 putative proteorhodopsin gene, partial cds Uncultured microorganism clone APF1113 putative proteorhodopsin gene, partial cds EU915854 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample_at_200_m_depth Atlantic Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTCGCCGCTACTGCTTTCTTCTTCATGGAGAGAGGCACTGTAGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCTTTTATCCATTACATGTACATGAGGGATGTATGGGTAACTACAGGCGATTCACCAACAGTATATAGATATATTGACTGGTTAATTACTGTGCCACTACAGATGATAGAATTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATTTTCTGGAGATTGTTACTTGGTTCACTAGTAATGTTAATCGGTGGATATTTAGGAGAGGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCAGGTTGGGTACACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCAGCTAAAAGTGGAAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTAGGATGGGCGATCTAT MVAATAFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLLGSLVMLIGGYLGEAGYINATLGFIIGMAGWVHILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCCGCTACTGCTTTCTTCTTCATGGAGAGAGGCACTGTAGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCTTTTATCCATTACATGTACATGAGGGATGTATGGGTA------------------------------ACTACA---------------------GGCGATTCACCAACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTGCCACTACAGATGATAGAATTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTACTTGGTTCACTAGTAATGTTAATCGGTGGATATTTAGGAGAG---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCAGGTTGGGTACACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCTAAA------AGT---GGAAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGATGG---------GCGATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVHILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_EF088540 [IV-Alpha8-EB80_69G02] clone_APF1113_EF088540 gi|126843304|gb|EF088540| Uncultured bacterium clone APF1113 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone APF1113 putative proteorhodopsin gene, partial cds. EF088540 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na 200m water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTCGCCGCTACTGCTTTCTTCTTCATGGAGAGAGGCACTGTAGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCTTTTATCCATTACATGTACATGAGGGATGTATGGGTAACTACAGGCGATTCACCAACAGTATATAGATATATTGACTGGTTAATTACTGTGCCACTACAGATGATAGAATTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATTTTCTGGAGATTGTTACTTGGTTCACTAGTAATGTTAATCGGTGGATATTTAGGAGAGGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCAGGTTGGGTACACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCAGCTAAAAGTGGAAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTAGGATGGGCGATCTATCCA MVAATAFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLLGSLVMLIGGYLGEAGYINATLGFIIGMAGWVHILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCCGCTACTGCTTTCTTCTTCATGGAGAGAGGCACTGTAGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCTTTTATCCATTACATGTACATGAGGGATGTATGGGTA------------------------------ACTACA---------------------GGCGATTCACCAACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTGCCACTACAGATGATAGAATTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTACTTGGTTCACTAGTAATGTTAATCGGTGGATATTTAGGAGAG---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCAGGTTGGGTACACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCTAAA------AGT---GGAAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGATGG---------GCGATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVHILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_EU915867 [IV-Alpha8-EB80_69G02] APF1139_env_samples_EU915867 gi|229358616|gb|EU915867| Uncultured microorganism clone APF1139 putative proteorhodopsin gene, partial cds Uncultured microorganism clone APF1139 putative proteorhodopsin gene, partial cds EU915867 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample_at_200_m_depth Atlantic Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGTTTTCTTCTTGGAGAGAGGCACCGTAGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCTTTTATCCATTACATGTACATGAGGGATGTATGGGTAACTACAGGCGATTCACCAACAGTATATAGATATATTGACTGGTTAATTACTGTGCCACTACAGATGATAGAATTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATTTTCTGGAGATTGTTACTTGGTTCACTAGTAATGTTAATCGGTGGATATTTAGGAGAGGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCAGCTAAAAGTGGAAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTAGGGTGGGCTATTTAT MVAATVFFLERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLLGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTT---TTCTTCTTGGAGAGAGGCACCGTAGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCTTTTATCCATTACATGTACATGAGGGATGTATGGGTA------------------------------ACTACA---------------------GGCGATTCACCAACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTGCCACTACAGATGATAGAATTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTACTTGGTTCACTAGTAATGTTAATCGGTGGATATTTAGGAGAG---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCTAAA------AGT---GGAAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGGTGG---------GCTATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATV-FFLERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_EF088553 [IV-Alpha8-EB80_69G02] clone_APF1139_EF088553 gi|126843330|gb|EF088553| Uncultured bacterium clone APF1139 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone APF1139 putative proteorhodopsin gene, partial cds. EF088553 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na 200m water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTGGCCGCTACTGTTTTCTTCTTGGAGAGAGGCACCGTAGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCTTTTATCCATTACATGTACATGAGGGATGTATGGGTAACTACAGGCGATTCACCAACAGTATATAGATATATTGACTGGTTAATTACTGTGCCACTACAGATGATAGAATTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATTTTCTGGAGATTGTTACTTGGTTCACTAGTAATGTTAATCGGTGGATATTTAGGAGAGGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCAGCTAAAAGTGGAAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTAGGGTGGGCTATTTATCCA MVAATVFFLERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLLGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTT---TTCTTCTTGGAGAGAGGCACCGTAGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCTTTTATCCATTACATGTACATGAGGGATGTATGGGTA------------------------------ACTACA---------------------GGCGATTCACCAACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTGCCACTACAGATGATAGAATTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTACTTGGTTCACTAGTAATGTTAATCGGTGGATATTTAGGAGAG---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCTAAA------AGT---GGAAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGGTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATV-FFLERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_EU915863 [IV-Alpha8-EB80_69G02] APF1130_env_samples_EU915863 gi|229358608|gb|EU915863| Uncultured microorganism clone APF1130 putative proteorhodopsin gene, partial cds Uncultured microorganism clone APF1130 putative proteorhodopsin gene, partial cds EU915863 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample_at_200_m_depth Atlantic Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTGGCCGCTACTGCATTCTTCTTCATGGAGAGAGGCACTGTAGCTCCTGGCTGGAAAACGTCAGTAACCGTTGCTGGTCTTGTAACTGGTATTGCTTTTATCCATTACATGTACATGAGGGATGTATGGGTAACTACAGGCGATTCACCAACAGTATATAGATATATTGACTGGTTAATTACTGTGCCACTACAGATGATAGAATTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATTTTCTGGAGATTGTTACTTGGTTCACTAGTAATGTTAATCGGTGGATATTTAGGAGAGGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCAGCTAAAAGTGGAAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTAGGTTGGGCAATCTAC MLAATAFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLLGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGCATTCTTCTTCATGGAGAGAGGCACTGTAGCTCCT---GGCTGGAAAACGTCAGTAACCGTTGCTGGTCTTGTAACTGGTATTGCTTTTATCCATTACATGTACATGAGGGATGTATGGGTA------------------------------ACTACA---------------------GGCGATTCACCAACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTGCCACTACAGATGATAGAATTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTACTTGGTTCACTAGTAATGTTAATCGGTGGATATTTAGGAGAG---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCTAAA------AGT---GGAAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_EF088549 [IV-Alpha8-EB80_69G02] clone_APF1130_EF088549 gi|126843322|gb|EF088549| Uncultured bacterium clone APF1130 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone APF1130 putative proteorhodopsin gene, partial cds. EF088549 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na 200m water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGCTGGCCGCTACTGCATTCTTCTTCATGGAGAGAGGCACTGTAGCTCCTGGCTGGAAAACGTCAGTAACCGTTGCTGGTCTTGTAACTGGTATTGCTTTTATCCATTACATGTACATGAGGGATGTATGGGTAACTACAGGCGATTCACCAACAGTATATAGATATATTGACTGGTTAATTACTGTGCCACTACAGATGATAGAATTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATTTTCTGGAGATTGTTACTTGGTTCACTAGTAATGTTAATCGGTGGATATTTAGGAGAGGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCAGCTAAAAGTGGAAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTAGGTTGGGCAATCTACCCA MLAATAFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLLGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGCATTCTTCTTCATGGAGAGAGGCACTGTAGCTCCT---GGCTGGAAAACGTCAGTAACCGTTGCTGGTCTTGTAACTGGTATTGCTTTTATCCATTACATGTACATGAGGGATGTATGGGTA------------------------------ACTACA---------------------GGCGATTCACCAACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTGCCACTACAGATGATAGAATTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTACTTGGTTCACTAGTAATGTTAATCGGTGGATATTTAGGAGAG---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCTAAA------AGT---GGAAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_EU915866 [IV-Alpha8-EB80_69G02] APF1136_env_samples_EU915866 gi|229358614|gb|EU915866| Uncultured microorganism clone APF1136 putative proteorhodopsin gene, partial cds Uncultured microorganism clone APF1136 putative proteorhodopsin gene, partial cds EU915866 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample_at_200_m_depth Atlantic Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGTATTCTTCTTCATGGAGAGAGGCACTGTAGCTCCTGGCTGGAAAACGTCAGTAACCGTTGCTGGTCTTGTAACTGGTATTGCTTTTATCCATTACATGTACATGAGGGATGTATGGGTAACTACAGGCGATTCACCAACAGTATATAGATATATTGACTGGTTAATTACTGTGCCACTACAGATGATAGAATTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATTTTCTGGAGATTGTTACTTGGTTCACTAGTAATGTTAATCGGTGGATATTTAGGAGAGGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCAGCTAAAAGTGGAAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTAGGTTGGGCGATCTAC MVAATVFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLLGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTATTCTTCTTCATGGAGAGAGGCACTGTAGCTCCT---GGCTGGAAAACGTCAGTAACCGTTGCTGGTCTTGTAACTGGTATTGCTTTTATCCATTACATGTACATGAGGGATGTATGGGTA------------------------------ACTACA---------------------GGCGATTCACCAACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTGCCACTACAGATGATAGAATTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTACTTGGTTCACTAGTAATGTTAATCGGTGGATATTTAGGAGAG---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCTAAA------AGT---GGAAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCGATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_EF088552 [IV-Alpha8-EB80_69G02] clone_APF1136_EF088552 gi|126843328|gb|EF088552| Uncultured bacterium clone APF1136 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone APF1136 putative proteorhodopsin gene, partial cds. EF088552 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na 200m water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTGGCCGCTACTGTATTCTTCTTCATGGAGAGAGGCACTGTAGCTCCTGGCTGGAAAACGTCAGTAACCGTTGCTGGTCTTGTAACTGGTATTGCTTTTATCCATTACATGTACATGAGGGATGTATGGGTAACTACAGGCGATTCACCAACAGTATATAGATATATTGACTGGTTAATTACTGTGCCACTACAGATGATAGAATTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATTTTCTGGAGATTGTTACTTGGTTCACTAGTAATGTTAATCGGTGGATATTTAGGAGAGGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCAGCTAAAAGTGGAAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTAGGTTGGGCGATCTACCCA MVAATVFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLLGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTATTCTTCTTCATGGAGAGAGGCACTGTAGCTCCT---GGCTGGAAAACGTCAGTAACCGTTGCTGGTCTTGTAACTGGTATTGCTTTTATCCATTACATGTACATGAGGGATGTATGGGTA------------------------------ACTACA---------------------GGCGATTCACCAACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTGCCACTACAGATGATAGAATTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTACTTGGTTCACTAGTAATGTTAATCGGTGGATATTTAGGAGAG---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCTAAA------AGT---GGAAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCGATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_EU915861 [IV-Alpha8-EB80_69G02] APF1123_env_samples_EU915861 gi|229358604|gb|EU915861| Uncultured microorganism clone APF1123 putative proteorhodopsin gene, partial cds Uncultured microorganism clone APF1123 putative proteorhodopsin gene, partial cds EU915861 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample_at_200_m_depth Atlantic Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGTGTTCTTCTTCAAGAAGAGAGGCACTGTAGCTCCTGGCTGGAAAACTTCACTAACTGCTGTTGGTCTTGTAACTGGTATTGCTTTTATCCATTACATGTACATGAGGGATGTATGGGTAACTACAGGCGATTCACCAACAGTATATAGATATATTGACTGGTTAATTACTGTTCCACTACAGATGATAGAATTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATTTTCTGGAGATTGTTACTTGGTTCACTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGAAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTAGGCTGGGCAATCTAC MVAATVFFFKKRGTVAPGWKTSLTAVGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLLGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTGTTCTTCTTCAAGAAGAGAGGCACTGTAGCTCCT---GGCTGGAAAACTTCACTAACTGCTGTTGGTCTTGTAACTGGTATTGCTTTTATCCATTACATGTACATGAGGGATGTATGGGTA------------------------------ACTACA---------------------GGCGATTCACCAACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTTCCACTACAGATGATAGAATTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTACTTGGTTCACTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGCTGG---------GCAATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFKKRGTVAP-GWKTSLTAVGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_EF088547 [IV-Alpha8-EB80_69G02] clone_APF1123_EF088547 gi|126843318|gb|EF088547| Uncultured bacterium clone APF1123 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone APF1123 putative proteorhodopsin gene, partial cds. EF088547 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na 200m water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTGGCCGCTACTGTGTTCTTCTTCAAGAAGAGAGGCACTGTAGCTCCTGGCTGGAAAACTTCACTAACTGCTGTTGGTCTTGTAACTGGTATTGCTTTTATCCATTACATGTACATGAGGGATGTATGGGTAACTACAGGCGATTCACCAACAGTATATAGATATATTGACTGGTTAATTACTGTTCCACTACAGATGATAGAATTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATTTTCTGGAGATTGTTACTTGGTTCACTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGAAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTAGGCTGGGCAATCTACCCA MVAATVFFFKKRGTVAPGWKTSLTAVGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLLGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTGTTCTTCTTCAAGAAGAGAGGCACTGTAGCTCCT---GGCTGGAAAACTTCACTAACTGCTGTTGGTCTTGTAACTGGTATTGCTTTTATCCATTACATGTACATGAGGGATGTATGGGTA------------------------------ACTACA---------------------GGCGATTCACCAACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTTCCACTACAGATGATAGAATTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTACTTGGTTCACTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGCTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFKKRGTVAP-GWKTSLTAVGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_DQ887782 [IV-Alpha8-EB80_69G02] clone_PF10006_DQ887782 gi|116294264|gb|DQ887782| Uncultured bacterium clone PF10006 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF10006 putative proteorhodopsin gene, partial cds. DQ887782 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2007 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGGTGGCCGCTACTGTTTTCTTCTTCATGGAGAGAAATACTGTAGCTCCTGGCTGGAAAACGTCAGTAACAGTTGCTGGTCTTGTAACTGGTATTGCTTTCATCCATTACATGTACATGAGAGATGTGTGGGTGACTACAGGCGATTCACCAACAGTATATAGATATATTGACTGGTTAATTACAGTGCCACTACAGATGATAGAATTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATCTTCTGGAGATTGTTACTTGGTTCACTAGTAATGTTAATTGGTGGATATTTAGGTGAGGCTGGATATATCAACGCTACACTTGGTTTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCCGCTAAAAGTGGAAACAAATCTCTTGTAACAGCATTTGGTGCAATGAGAATGATCGTTACAGTAGGTTGGGCCATCTACCCA MVAATVFFFMERNTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLLGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAAAKSGNKSLVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTTTTCTTCTTCATGGAGAGAAATACTGTAGCTCCT---GGCTGGAAAACGTCAGTAACAGTTGCTGGTCTTGTAACTGGTATTGCTTTCATCCATTACATGTACATGAGAGATGTGTGGGTG------------------------------ACTACA---------------------GGCGATTCACCAACAGTATATAGATATATTGACTGG------------------------TTAATTACAGTGCCACTACAGATGATAGAATTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATC------------------------------------TTCTGGAGA---TTGTTACTTGGTTCACTAGTAATGTTAATTGGTGGATATTTAGGTGAG---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCCGCTAAA------AGT---GGAAACAAATCTCTT---GTA---ACA---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERNTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_DQ887792 [IV-Alpha8-EB80_69G02] clone_PF10018_DQ887792 gi|116294284|gb|DQ887792| Uncultured bacterium clone PF10018 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF10018 putative proteorhodopsin gene, partial cds. DQ887792 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2007 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGGTGGCCGCTACTGTTTTCTTCTTCATGGAGAGAAATACTGTAGCTCCTGGCTGGAAAACGTCAGTAACAGTTGCTGGTCTTGTAACTGGTATTGCTTTCATCCATTACATGTACATGAGAGATGTGTGGGTGACTACAGGCGATTCACCAACAGTATATAGATATATTGACTGGTTAATTACAGTGCCACTACAGATGATAGAATTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATCTTCTGGAGATTGTTACTTGGTTCACTAGTAATGTTAATTGGTGGATATTTAGGTGAGGCTGGATATATCAACGCTACACTTGGTTTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCCGCTAAAAGTGGAAACAAATCTCTTGTAACAGCATTTGGTGCAATGAGAATGATCGTTACAGTAGGTTGGGCCATCTACCCA MVAATVFFFMERNTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLLGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAAAKSGNKSLVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTTTTCTTCTTCATGGAGAGAAATACTGTAGCTCCT---GGCTGGAAAACGTCAGTAACAGTTGCTGGTCTTGTAACTGGTATTGCTTTCATCCATTACATGTACATGAGAGATGTGTGGGTG------------------------------ACTACA---------------------GGCGATTCACCAACAGTATATAGATATATTGACTGG------------------------TTAATTACAGTGCCACTACAGATGATAGAATTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATC------------------------------------TTCTGGAGA---TTGTTACTTGGTTCACTAGTAATGTTAATTGGTGGATATTTAGGTGAG---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCCGCTAAA------AGT---GGAAACAAATCTCTT---GTA---ACA---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERNTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_DQ887790 [IV-Alpha8-EB80_69G02] clone_PF10015_DQ887790 gi|116294280|gb|DQ887790| Uncultured bacterium clone PF10015 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF10015 putative proteorhodopsin gene, partial cds. DQ887790 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2007 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGGTGGCCGCTACTGTTTTCTTCTTCATGGAGAGAAATACTGTAGCTCCTGGCTGGAAAACGTCAGTAACAGTTGCTGGTCTTGTAACTGGTATTGCTTTCATCCATTACATGTACATGAGAGATGTGTGGGTGACTACAGGCGATTCACCAACAGTATATAGATATATTGACTGGTTAATTACAGTGCCACTACAGATGATAGAATTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATCTTCTGGAGATTGTTACTTGGTTCACTAGTAATGTTAATTGGTGGATATTTAGGTGAGGCTGGATATATCAACGCTACACTTGGTTTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCCGCTAAAAGTGGAAACAAATCTCTTGTAACAGCATTTGGTGCAATGAGAATGATCGTTACAGTAGGTTGGGCCATCTACCCA MVAATVFFFMERNTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLLGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAAAKSGNKSLVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTTTTCTTCTTCATGGAGAGAAATACTGTAGCTCCT---GGCTGGAAAACGTCAGTAACAGTTGCTGGTCTTGTAACTGGTATTGCTTTCATCCATTACATGTACATGAGAGATGTGTGGGTG------------------------------ACTACA---------------------GGCGATTCACCAACAGTATATAGATATATTGACTGG------------------------TTAATTACAGTGCCACTACAGATGATAGAATTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATC------------------------------------TTCTGGAGA---TTGTTACTTGGTTCACTAGTAATGTTAATTGGTGGATATTTAGGTGAG---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCCGCTAAA------AGT---GGAAACAAATCTCTT---GTA---ACA---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERNTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_DQ887795 [IV-Alpha8-EB80_69G02] clone_PF10021_DQ887795 gi|116294290|gb|DQ887795| Uncultured bacterium clone PF10021 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF10021 putative proteorhodopsin gene, partial cds. DQ887795 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2007 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGGTGGCCGCTACTGTTTTCTTCTTCATGGAGAGAAATACTGTAGCTCCTGGCTGGAAAACGTCAGTAACAGTTGCTGGTCTTGTAACTGGTATTGCTTTCATCCATTACATGTACATGAGAGATGTGTGGGTGACTACAGGCGATTCACCAACAGTATATAGATATATTGACTGGTTAATTACAGTGCCACTACAGATGATAGAATTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATCTTCTGGAGATTGTTACTTGGTTCACTAGTAATGTTAATTGGTGGATATTTAGGTGAGGCTGGATATATCAACGCTACACTTGGTTTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCCGCTAAAAGTGGAAACAAATCTCTTGTAACAGCATTTGGTGCAATGAGAATGATCGTTACAGTAGGTTGGGCCATCTACCCA MVAATVFFFMERNTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLLGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAAAKSGNKSLVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTTTTCTTCTTCATGGAGAGAAATACTGTAGCTCCT---GGCTGGAAAACGTCAGTAACAGTTGCTGGTCTTGTAACTGGTATTGCTTTCATCCATTACATGTACATGAGAGATGTGTGGGTG------------------------------ACTACA---------------------GGCGATTCACCAACAGTATATAGATATATTGACTGG------------------------TTAATTACAGTGCCACTACAGATGATAGAATTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATC------------------------------------TTCTGGAGA---TTGTTACTTGGTTCACTAGTAATGTTAATTGGTGGATATTTAGGTGAG---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCCGCTAAA------AGT---GGAAACAAATCTCTT---GTA---ACA---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERNTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_DQ887784 [IV-Alpha8-EB80_69G02] clone_PF10008_DQ887784 gi|116294268|gb|DQ887784| Uncultured bacterium clone PF10008 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF10008 putative proteorhodopsin gene, partial cds. DQ887784 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2007 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na CTATTAGCGGCTACTGTATTCTTCTTCATGGAGAGAAATACTGTAGCTCCTGGCTGGAAAACGTCAGTAACAGTTGCTGGTCTTGTAACTGGTATTGCTTTCATCCATTACATGTACATGAGAGATGTGTGGGTGACTACAGGCGATTCACTAACAGTATATAGATATATTGACTGGTTAATTACAGTGCCACTACAGATGATAGAATTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATCTTCTGGAGATTGTTACTTGGTTCACTAGTGATGTTAATTGGTGGATATTTAGGTGAGGCTGGATATATCAACGCTACACTTGGTTTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCCGCTAAAAGTGGAAACAAATCTCTTGTAACAGCATTTGGTGCAATGAGAATGATCGTTACAGTAGGTTGGGCGATCTACCCA LLAATVFFFMERNTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSLTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLLGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAAAKSGNKSLVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTCATGGAGAGAAATACTGTAGCTCCT---GGCTGGAAAACGTCAGTAACAGTTGCTGGTCTTGTAACTGGTATTGCTTTCATCCATTACATGTACATGAGAGATGTGTGGGTG------------------------------ACTACA---------------------GGCGATTCACTAACAGTATATAGATATATTGACTGG------------------------TTAATTACAGTGCCACTACAGATGATAGAATTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATC------------------------------------TTCTGGAGA---TTGTTACTTGGTTCACTAGTGATGTTAATTGGTGGATATTTAGGTGAG---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCCGCTAAA------AGT---GGAAACAAATCTCTT---GTA---ACA---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCGATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFMERNTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSLTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_DQ422710 [IV-Alpha8-EB80_69G02] clone_med-tb04-20m-g4_DQ422710 gi|90024940|gb|DQ422710| Uncultured bacterium clone med-tb04-20m-g4 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-g4 putative proteorhodopsin gene, partial cds. DQ422710 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGCTACATTGACTGGCTAATTACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGCTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGCTTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTATTCTCAGGTGAGGCTGGAAAAGCTGCAGCAAAAAGCGGAAGCAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTAGGTTGGGCTATTTATCCA SYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIVGMAGWIYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGACTGG------------------------CTAATTACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGCTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGC---TTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAGGCTGGAAAAGCTGCAGCAAAA------AGC---GGAAGCAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_1105096323408 [IV-Alpha8-18B2] JCVI_ORF_1105096323408_GS000c_Open_Ocean_5m jcvi|1105096323408| 1105096323408 JCVI ORF 1105096323408 1105096323408 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.22_0.8 other #na 25-FEB-2003 Open_Ocean/5m_depth/S_36.7_psu/GS000c/Sargasso_Stations_3/Sargasso_Sea Sargasso Sea marine 32.174835 -64.01017 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTAAAATTGTTTGCTTTAGCAGCGATGGCTCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGAAGCAACCATGTTGAATCAGGATGATTTCGTAGGAATTTCATTTTGGATCATCTCTATGGGAATGTTAGCAGCGACTGCTTTCTTTTTCTTAGAAGTTGGTAACGTGGCAGCAGGCTGGAGAACTTCAGTTATTGTTGCTGGGCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTCGCTACTGGAGACTCACCAACTGTTTACAGATATATTGACTGGTTAATTACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATCGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGCTTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAGCAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTAGGTTGGGCTATTTACCCATTAGGTTACATATTTGGTTACCTAACAGGTGGAGTAGATGCTGACTCACTTAACGTTGTTTACAACTTAGCAGACTTTATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTGTTAGCGGAAAAAGAGCTAAG MKKLKLFALAAMALIGFSGIAIAAEATMLNQDDFVGISFWIISMGMLAATAFFFLEVGNVAAGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIVGMAGWIYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDADSLNVVYNLADFINKIAFGLVIWAAATSVSGKRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTAAAATTGTTTGCTTTAGCAGCGATGGCTCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGAAGCAACCATGTTGAATCAGGATGATTTCGTAGGAATTTCATTTTGGATCATCTCTATGGGAATGTTAGCAGCGACTGCTTTCTTTTTCTTAGAAGTTGGTAACGTGGCAGCA---GGCTGGAGAACTTCAGTTATTGTTGCTGGGCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTC------------------------------GCTACT---------------------GGAGACTCACCAACTGTTTACAGATATATTGACTGG------------------------TTAATTACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGC---TTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAGCAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTACATATTTGGTTACCTA---------------------------------------ACAGGTGGAGTAGATGCTGACTCACTTAACGTTGTTTACAACTTAGCAGACTTTATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTGTT---AGCGGAAAAAGAGCTAAG--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALAAMALIGFSGIAIAAEATMLNQDDFVGISFWIISMGMLAATAFFFLEVGNVAA-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDADSLNVVYNLADFINKIAFGLVIWAAATSV-SGKRAK----------------------------------- [IV-Alpha8-18B2]_DQ062254 [IV-Alpha8-18B2] clone_MedeBAC18B2_complete_DQ062254 gi|67483453|gb|DQ062254| Uncultured bacterium clone MedeBAC18B2 proteorhodopsin gene, complete cds Uncultured bacterium clone MedeBAC18B2 proteorhodopsin gene, complete cds DQ062254 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na ATGAAAAAACTAAAATTGTTTGCTTTAGCAGCGATGGCTCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGAAGCAACCATGTTGAATCAGGATGATTTCGTAGGAATTTCATTTTGGATCATCTCTATGGGAATGTTAGCAGCGACTGCTTTCTTTTTCTTAGAAGTTGGTAACGTGGCAGCAGGCTGGAGAACTTCAGTTATTGTTGCTGGGCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTCGCTACTGGAGACTCACCAACTGTTTACAGATATATTGACTGGTTAATTACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCAATCGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGCTTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAGCAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTAGGTTGGGCTATTTACCCATTAGGTTACATATTTGGTTACCTAACAGGTGGAGTAGATGCTGACTCACTTAACGTTGTTTACAACTTAGCAGACTTTATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTGTTAGCGGAAAAAGAGCTAAG MKKLKLFALAAMALIGFSGIAIAAEATMLNQDDFVGISFWIISMGMLAATAFFFLEVGNVAAGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIVGMAGWIYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDADSLNVVYNLADFINKIAFGLVIWAAATSVSGKRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTAAAATTGTTTGCTTTAGCAGCGATGGCTCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGAAGCAACCATGTTGAATCAGGATGATTTCGTAGGAATTTCATTTTGGATCATCTCTATGGGAATGTTAGCAGCGACTGCTTTCTTTTTCTTAGAAGTTGGTAACGTGGCAGCA---GGCTGGAGAACTTCAGTTATTGTTGCTGGGCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTC------------------------------GCTACT---------------------GGAGACTCACCAACTGTTTACAGATATATTGACTGG------------------------TTAATTACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCA---------ATC---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGC---TTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAGCAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTACATATTTGGTTACCTA---------------------------------------ACAGGTGGAGTAGATGCTGACTCACTTAACGTTGTTTACAACTTAGCAGACTTTATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTGTT---AGCGGAAAAAGAGCTAAG--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALAAMALIGFSGIAIAAEATMLNQDDFVGISFWIISMGMLAATAFFFLEVGNVAA-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDADSLNVVYNLADFINKIAFGLVIWAAATSV-SGKRAK----------------------------------- [IV-Alpha8-18B2]_1105118868108 [IV-Alpha8-18B2] JCVI_ORF_1105118868108_GS001c_Open_Ocean_5m jcvi|1105118868108| 1105118868108 JCVI ORF 1105118868108 1105118868108 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 15-MAY-2003 Open_Ocean/5m_depth/S_36.7_psu/GS001c/Hydrostation_S/Sargasso_Sea Sargasso Sea marine 32.166668 -64.5 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAACTAAATTGTTTGCTTTAGCAGCGATGGCTCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGAAGCAACCATGTTGAATCAAGATGATTTCGTAGGAATTTCATTTTGGATCATCTCTATGGGAATGTTAGCAGCGACTGCTTTCTTTTTCTTAGAAGTTGGTAACGTGGCAGCAGGCTGGAGAACTTCAGTTATTGTTGCTGGGCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCACCAACTGTTTACAGATATATTGACTGGTTAATTACTGTTCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATCGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGCTTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAGCAAGGCTCTTGTAACTGCATTTGGTGCAATGAGAATGATTGTTACAGTAGGTTGGGCTATTTACCCATTAGGTTACATATTTGGTTACCTAACAGGTGGAGTAGATGCTGACTCACTTAACGTTGTTTACAACTTAGCAGACTTTATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCCGCTGCAACTAGCGTTAGTGGAAAAAGAGCTAAG MKTKLFALAAMALIGFSGIAIAAEATMLNQDDFVGISFWIISMGMLAATAFFFLEVGNVAAGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIVGMAGWIYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDADSLNVVYNLADFINKIAFGLVIWAAATSVSGKRAK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAACTAAATTGTTTGCTTTAGCAGCGATGGCTCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGAAGCAACCATGTTGAATCAAGATGATTTCGTAGGAATTTCATTTTGGATCATCTCTATGGGAATGTTAGCAGCGACTGCTTTCTTTTTCTTAGAAGTTGGTAACGTGGCAGCA---GGCTGGAGAACTTCAGTTATTGTTGCTGGGCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCACCAACTGTTTACAGATATATTGACTGG------------------------TTAATTACTGTTCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGC---TTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAGCAAGGCTCTT---GTA---ACT---GCA---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTACATATTTGGTTACCTA---------------------------------------ACAGGTGGAGTAGATGCTGACTCACTTAACGTTGTTTACAACTTAGCAGACTTTATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCCGCTGCAACTAGCGTT---AGTGGAAAAAGAGCTAAG--------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------MKTKLFALAAMALIGFSGIAIAAEATMLNQDDFVGISFWIISMGMLAATAFFFLEVGNVAA-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDADSLNVVYNLADFINKIAFGLVIWAAATSV-SGKRAK----------------------------------- [IV-Alpha8-18B2]_1105110593742 [IV-Alpha8-18B2] JCVI_ORF_1105110593742_GS000a_Open_Ocean_5m jcvi|1105110593742| 1105110593742 JCVI ORF 1105110593742 1105110593742 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 26-FEB-2003 Open_Ocean/5m_depth/S_36.7_psu/GS000a/Sargasso_Station_11/Sargasso_Sea Sargasso Sea marine 31.175 -64.32433 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf CTGCAGACGATGGCTCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGAAGCAACCATGTTGAATCACGATGATTTCGTAGGAATTTCATTTTGGATCATCTCTATGGGAATGTTAGCAGCGACTGCTTTCTTTTTCTTAGAAGTTGGTAACGTGGCAGCAGGCTGGAGAACTTCAGTTATTGTTGCTGGGCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCACCAACTGTTTACAGATATATTGACTGGTTAATTACTGTTCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATCGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGCTTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAGCAAGGCTCTTGTAACTGCATTTGGTGCAATGAGAATGATTGTTACAGTAGGTTGGGCTATTTACCCATTAGGTTACATATTTGGTTACCTAACAGGTGGAGTAGATGCTGACTCACTTAACGTTGTTTACAACTTAGCAGACTTTATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGCGTTAGTGGAAAAAGAGCTAAG LQTMALIGFSGIAIAAEATMLNHDDFVGISFWIISMGMLAATAFFFLEVGNVAAGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIVGMAGWIYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDADSLNVVYNLADFINKIAFGLVIWAAATSVSGKRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCAGACGATGGCTCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGAAGCAACCATGTTGAATCACGATGATTTCGTAGGAATTTCATTTTGGATCATCTCTATGGGAATGTTAGCAGCGACTGCTTTCTTTTTCTTAGAAGTTGGTAACGTGGCAGCA---GGCTGGAGAACTTCAGTTATTGTTGCTGGGCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCACCAACTGTTTACAGATATATTGACTGG------------------------TTAATTACTGTTCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGC---TTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAGCAAGGCTCTT---GTA---ACT---GCA---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTACATATTTGGTTACCTA---------------------------------------ACAGGTGGAGTAGATGCTGACTCACTTAACGTTGTTTACAACTTAGCAGACTTTATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGCGTT---AGTGGAAAAAGAGCTAAG--------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------LQTMALIGFSGIAIAAEATMLNHDDFVGISFWIISMGMLAATAFFFLEVGNVAA-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDADSLNVVYNLADFINKIAFGLVIWAAATSV-SGKRAK----------------------------------- [IV-Alpha8-18B2]_1105107376348 [IV-Alpha8-18B2] JCVI_ORF_1105107376348_GS000c_Open_Ocean_5m jcvi|1105107376348| 1105107376348 JCVI ORF 1105107376348 1105107376348 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.22_0.8 other #na 25-FEB-2003 Open_Ocean/5m_depth/S_36.7_psu/GS000c/Sargasso_Stations_3/Sargasso_Sea Sargasso Sea marine 32.174835 -64.01017 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTAAAATTGTTTGCTTTAGCAGCGATGGCTCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGAAGCAACCATGTTGAATCAGGATGATTTCGTAGGAATTTCGTTTTGGATCATCTCTATGGGAATGTTAGCAGCGACTGCTTTCTTTTTCTTAGAAGTTGGTAACGTAGCAGCAGGCTGGAGAACTTCAGTTATTGTTGCTGGGCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCACCAACTGTTTACAGATATATTGACTGGTTAATTACTGTTCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATCGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGCTTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAGCAAGGCTCTTGTAACTGCATTTGGTGCAATGAGAATGATTGTTACAGTAGGTTGGGCTATTTACCCATTAGGTTACATATTTGGTTACCTAACAGGTGGAGTAGATGCTGACTCACTTAACGTTGTTTACAACTTAGCAGACTTTATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGCGTTAGTGGAAAAAGAGCTAAG MKKLKLFALAAMALIGFSGIAIAAEATMLNQDDFVGISFWIISMGMLAATAFFFLEVGNVAAGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIVGMAGWIYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDADSLNVVYNLADFINKIAFGLVIWAAATSVSGKRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTAAAATTGTTTGCTTTAGCAGCGATGGCTCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGAAGCAACCATGTTGAATCAGGATGATTTCGTAGGAATTTCGTTTTGGATCATCTCTATGGGAATGTTAGCAGCGACTGCTTTCTTTTTCTTAGAAGTTGGTAACGTAGCAGCA---GGCTGGAGAACTTCAGTTATTGTTGCTGGGCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCACCAACTGTTTACAGATATATTGACTGG------------------------TTAATTACTGTTCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGC---TTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAGCAAGGCTCTT---GTA---ACT---GCA---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTACATATTTGGTTACCTA---------------------------------------ACAGGTGGAGTAGATGCTGACTCACTTAACGTTGTTTACAACTTAGCAGACTTTATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGCGTT---AGTGGAAAAAGAGCTAAG--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALAAMALIGFSGIAIAAEATMLNQDDFVGISFWIISMGMLAATAFFFLEVGNVAA-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDADSLNVVYNLADFINKIAFGLVIWAAATSV-SGKRAK----------------------------------- [IV-Alpha8-18B2]_1105102032908 [IV-Alpha8-18B2] JCVI_ORF_1105102032908_GS001c_Open_Ocean_5m jcvi|1105102032908| 1105102032908 JCVI ORF 1105102032908 1105102032908 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 15-MAY-2003 Open_Ocean/5m_depth/S_36.7_psu/GS001c/Hydrostation_S/Sargasso_Sea Sargasso Sea marine 32.166668 -64.5 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TTGGATTTTTCAGGTATAGCTATTGCAGCAGAAGCAACCATGTTGAATCAGGATGATTTCGTAGGAATTTCATTTTGGATCATCTCTATGGGAATGTTAGCAGCGACTGCTTTCTTTTTCTTAGAAGTTGGTAACGTAGCAGCAGGCTGGAGAACTTCAGTTATTGTTGCTGGGCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCACCAACTGTTTACAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATCGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGCTTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAGCAAGGCTCTTGTAACTGCATTTGGTGCAATGAGAATGATTGTTACAGTAGGTTGGGCTATTTACCCATTAGGTTACATATTTGGTTACCTAACAGGTGGAGTAGATGCTGACTCACTTAACGTTGTTTACAACTTAGCAGACTTTATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGCGTTAGTGGAAAAAGAGCTAAG LDFSGIAIAAEATMLNQDDFVGISFWIISMGMLAATAFFFLEVGNVAAGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIVGMAGWIYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDADSLNVVYNLADFINKIAFGLVIWAAATSVSGKRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTTTTCAGGTATAGCTATTGCAGCAGAAGCAACCATGTTGAATCAGGATGATTTCGTAGGAATTTCATTTTGGATCATCTCTATGGGAATGTTAGCAGCGACTGCTTTCTTTTTCTTAGAAGTTGGTAACGTAGCAGCA---GGCTGGAGAACTTCAGTTATTGTTGCTGGGCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCACCAACTGTTTACAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGC---TTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAGCAAGGCTCTT---GTA---ACT---GCA---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTACATATTTGGTTACCTA---------------------------------------ACAGGTGGAGTAGATGCTGACTCACTTAACGTTGTTTACAACTTAGCAGACTTTATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGCGTT---AGTGGAAAAAGAGCTAAG--------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------LDFSGIAIAAEATMLNQDDFVGISFWIISMGMLAATAFFFLEVGNVAA-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDADSLNVVYNLADFINKIAFGLVIWAAATSV-SGKRAK----------------------------------- [IV-Alpha8-18B2]_1105088805396 [IV-Alpha8-18B2] JCVI_ORF_1105088805396_GS000a_Open_Ocean_5m jcvi|1105088805396| 1105088805396 JCVI ORF 1105088805396 1105088805396 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 26-FEB-2003 Open_Ocean/5m_depth/S_36.7_psu/GS000a/Sargasso_Station_11/Sargasso_Sea Sargasso Sea marine 31.175 -64.32433 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf GAGAGGGAGTTTTTTATGAAAAAACTAAAATTGTTTGCTTTAGCAGCGATGGCTCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGAAGCAACCATGTTGAATCAGGATGATTTCGTAGGAATTTCATTTTGGATCATCTCTATGGGAATGTTAGCAGCGACTGCTTTCTTTTTCTTAGAAGTTGGTAACGTGGCAGCAGGCTGGAGAACTTCAGTTATTGTTGCTGGGCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCACCAACTGTTTACAGATATATTGACTGGTTAATTACTGTTCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATCGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGCTTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAGCAAGGCTCTTGTAACTGCATTTGGTGCAATGAGAATGATTGTTACAGTAGGTTGGGCTATTTACCCATTAGGTTACATATTTGGTTACCTAACAGGTGGAGTAGATGCTGACTCACTTAACGTTGTTTACAACTTAGCAGACTTTATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGCGTTAGTGGAAAAAGAGCTAAG EREFFMKKLKLFALAAMALIGFSGIAIAAEATMLNQDDFVGISFWIISMGMLAATAFFFLEVGNVAAGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIVGMAGWIYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDADSLNVVYNLADFINKIAFGLVIWAAATSVSGKRAK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGAGGGAGTTTTTTATGAAAAAACTAAAATTGTTTGCTTTAGCAGCGATGGCTCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGAAGCAACCATGTTGAATCAGGATGATTTCGTAGGAATTTCATTTTGGATCATCTCTATGGGAATGTTAGCAGCGACTGCTTTCTTTTTCTTAGAAGTTGGTAACGTGGCAGCA---GGCTGGAGAACTTCAGTTATTGTTGCTGGGCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCACCAACTGTTTACAGATATATTGACTGG------------------------TTAATTACTGTTCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGC---TTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAGCAAGGCTCTT---GTA---ACT---GCA---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTACATATTTGGTTACCTA---------------------------------------ACAGGTGGAGTAGATGCTGACTCACTTAACGTTGTTTACAACTTAGCAGACTTTATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGCGTT---AGTGGAAAAAGAGCTAAG--------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------EREFFMKKLKLFALAAMALIGFSGIAIAAEATMLNQDDFVGISFWIISMGMLAATAFFFLEVGNVAA-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDADSLNVVYNLADFINKIAFGLVIWAAATSV-SGKRAK----------------------------------- [IV-Alpha8-18B2]_1105082606850 [IV-Alpha8-18B2] JCVI_ORF_1105082606850_GS001c_Open_Ocean_5m jcvi|1105082606850| 1105082606850 JCVI ORF 1105082606850 1105082606850 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 15-MAY-2003 Open_Ocean/5m_depth/S_36.7_psu/GS001c/Hydrostation_S/Sargasso_Sea Sargasso Sea marine 32.166668 -64.5 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TTGTTTGCTTTAGCAGCGATGGCTCTGATTGGATTTTCACGTATAGCTATTGCAGCAGAAGCAACCATGTTGAATCAAGATGATTTCGTAGGAATTTCATTTTGGATCATCTCTATGGGAATGTTAGCAGCGACTGCTTTCTTTTTCTTAGAAGTTGGTAACGTGGCAGCAGGCTGGAGAACTTCAGTTATTGTTGCTGGGCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCACCAACTGTTTACAGATATATTGACTGGTTAATTACTGTTCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATCGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGCTTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAGCAAGGCTCTTGTAACTGCATTTGGTGCAATGAGAATGATTGTTACAGTAGGTTGGGCTATTTACCCATTAGGTTACATATTTGGTTACCTAACAGGTGGAGTAGATGCTGACTCACTTAACGTTGTTTACAACTTAGCAGACTTTATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCCGCTGCAACTAGCGTTAGTGGAAAAAGAGCTAAG LFALAAMALIGFSRIAIAAEATMLNQDDFVGISFWIISMGMLAATAFFFLEVGNVAAGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIVGMAGWIYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDADSLNVVYNLADFINKIAFGLVIWAAATSVSGKRAK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTTGCTTTAGCAGCGATGGCTCTGATTGGATTTTCACGTATAGCTATTGCAGCAGAAGCAACCATGTTGAATCAAGATGATTTCGTAGGAATTTCATTTTGGATCATCTCTATGGGAATGTTAGCAGCGACTGCTTTCTTTTTCTTAGAAGTTGGTAACGTGGCAGCA---GGCTGGAGAACTTCAGTTATTGTTGCTGGGCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCACCAACTGTTTACAGATATATTGACTGG------------------------TTAATTACTGTTCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGC---TTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAGCAAGGCTCTT---GTA---ACT---GCA---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTACATATTTGGTTACCTA---------------------------------------ACAGGTGGAGTAGATGCTGACTCACTTAACGTTGTTTACAACTTAGCAGACTTTATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCCGCTGCAACTAGCGTT---AGTGGAAAAAGAGCTAAG--------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------LFALAAMALIGFSRIAIAAEATMLNQDDFVGISFWIISMGMLAATAFFFLEVGNVAA-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDADSLNVVYNLADFINKIAFGLVIWAAATSV-SGKRAK----------------------------------- [IV-Alpha8-18B2]_EU079176 [IV-Alpha8-18B2] NASB_16_env_samples_EU079176 gi|156106512|gb|EU079176| Uncultured organism clone NASB 16 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 16 putative proteorhodopsin gene, partial cds EU079176 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGTTATGTAGACTGGTTAATTACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATCGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGATTTATAATCGGAATGGCAGGTTGGGTATACATTCTTTACGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAGCAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACTGTAGGATGGGCAATTTAT RYVDWLITVPLQMVEFYLILAAIGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTATGTAGACTGG------------------------TTAATTACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGA---TTTATAATCGGAATGGCAGGTTGGGTATACATTCTTTACGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAGCAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACTGTA---------------------------------------------------------------GGATGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926088 [IV-Alpha8-18B2] BOUM_OTU001_env_samples gb|KJ926088| Uncultured bacterium clone BOUM OTU001 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU001 putative proteorhodopsin gene, partial cds KJ926088 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 39.0995 5.3403333 #na #na #na #na #na GTTGATTGGTTAATTACTGTTCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATCGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGCTTTATTGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAGCAAGGCTCTTGTAACTGCATTTGGTGCAATGAGAATGATTGTTACAGTAGGCTGGGCAATTTAC VDWLITVPLQMVEFYLILAAIGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIVGMAGWIYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGATTGG------------------------TTAATTACTGTTCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGC---TTTATTGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAGCAAGGCTCTT---GTA---ACT---GCA---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGCTGG---------GCAATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EU079196 [IV-Alpha8-18B2] NASB_49_env_samples_EU079196 gi|156106552|gb|EU079196| Uncultured organism clone NASB 49 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 49 putative proteorhodopsin gene, partial cds EU079196 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGGTACGTTGATTGGTTAATTACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATCGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTACTTGGTTCATTAGTAATGTTGATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGCTTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAGCAAGGCTCTTGTAACTGCATTTGGTGCAATGAGAATGATTGTTACAGTAGGGTGGGCCATATAC RYVDWLITVPLQMVEFYLILAAIGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIVGMAGWIYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTACGTTGATTGG------------------------TTAATTACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCATTAGTAATGTTGATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGC---TTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAGCAAGGCTCTT---GTA---ACT---GCA---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGGTGG---------GCCATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_DQ422570 [IV-Alpha8-18B2] clone_med-tb04-0m-c3_DQ422570 gi|90024660|gb|DQ422570| Uncultured bacterium clone med-tb04-0m-c3 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-c3 putative proteorhodopsin gene, partial cds. DQ422570 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATCACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCAATCGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTACTTGGTTCATTAGTAATGTTGATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGCTTTATAGTCGGAATGGCTGGTTGGATATACATCCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAGCAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIVGMAGWIYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATCACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCA---------ATC---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCATTAGTAATGTTGATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGC---TTTATAGTCGGAATGGCTGGTTGGATATACATCCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAGCAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_DQ422503 [IV-Alpha8-18B2] clone_med-tb04-50m-e7_DQ422503 gi|90024526|gb|DQ422503| Uncultured bacterium clone med-tb04-50m-e7 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-e7 putative proteorhodopsin gene, partial cds. DQ422503 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATCACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCAATCGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTACTTGGTTCATTAGTAATGTTGATCGGTGGATGCTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGCTTTATAGTCGGAATGGCTGGTTGGATATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAGCAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLLGSLVMLIGGCLGEAGYINATLGFIVGMAGWIYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATCACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCA---------ATC---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCATTAGTAATGTTGATCGGTGGATGCTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGC---TTTATAGTCGGAATGGCTGGTTGGATATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAGCAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSLVMLIGGCLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_DQ422150 [IV-Alpha8-18B2] clone_med-0m-a1_DQ422150 gi|90023820|gb|DQ422150| Uncultured bacterium clone med-0m-a1 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-a1 putative proteorhodopsin gene, partial cds. DQ422150 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na CGATACATAGACTGGCTAATTACTGTTCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATCGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGCTTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAGCAAGGCTCTTGTAACTGCATTTGGTGCAATGAGAATGATTGTTACAGTAGGTTGGGCTATATATCCA RYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIVGMAGWIYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATAGACTGG------------------------CTAATTACTGTTCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGC---TTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAGCAAGGCTCTT---GTA---ACT---GCA---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_DQ422474 [IV-Alpha8-18B2] clone_med-tb04-50m-c2_DQ422474 gi|90024468|gb|DQ422474| Uncultured bacterium clone med-tb04-50m-c2 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-c2 putative proteorhodopsin gene, partial cds. DQ422474 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na CGATACATAGACTGGCTAATTACTGTTCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATCGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGCTTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAGCAAGGCTCTTGTAACTGCATTTGGTGCAATGAGAATGATTGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIVGMAGWIYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATAGACTGG------------------------CTAATTACTGTTCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGC---TTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAGCAAGGCTCTT---GTA---ACT---GCA---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_DQ422575 [IV-Alpha8-18B2] clone_med-tb04-0m-c8_DQ422575 gi|90024670|gb|DQ422575| Uncultured bacterium clone med-tb04-0m-c8 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-c8 putative proteorhodopsin gene, partial cds. DQ422575 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTTCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATCGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGCTTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAGCAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIVGMAGWIYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTTCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGC---TTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAGCAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_DQ422241 [IV-Alpha8-18B2] clone_med-0m-h9_DQ422241 gi|90024002|gb|DQ422241| Uncultured bacterium clone med-0m-h9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-h9 putative proteorhodopsin gene, partial cds. DQ422241 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTAATTACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATCGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGCTTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAGCAAGGCTCTTGTAACTGCATTTGGTGCAATGAGAATGGTTGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIVGMAGWIYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMVVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGC---TTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAGCAAGGCTCTT---GTA---ACT---GCA---TTT---GGT---GCAATG---AGAATGGTTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMVVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_DQ422725 [IV-Alpha8-18B2] clone_med-tb04-20m-h8_DQ422725 gi|90024970|gb|DQ422725| Uncultured bacterium clone med-tb04-20m-h8 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-h8 putative proteorhodopsin gene, partial cds. DQ422725 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCCATTGGTAAAGCAAACTCTGGAATGTTCTGGAGACTGTTACTTGGTTCATTAGTAATGTTAATTGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGCTTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAGCAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTAAGTTGGGCTATTTATCCA RYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIVGMAGWIYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTVSWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCC---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---CTGTTACTTGGTTCATTAGTAATGTTAATTGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGC---TTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAGCAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------AGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV---------------------SW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_DQ422465 [IV-Alpha8-18B2] clone_med-tb04-50m-b5_DQ422465 gi|90024450|gb|DQ422465| Uncultured bacterium clone med-tb04-50m-b5 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-b5 putative proteorhodopsin gene, partial cds. DQ422465 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCCATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGCTTTATAGTCGGGATGGCAGGTTGGATATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAGCAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIVGMAGWIYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCC---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGC---TTTATAGTCGGGATGGCAGGTTGGATATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAGCAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_DQ422606 [IV-Alpha8-18B2] clone_med-tb04-0m-f5_DQ422606 gi|90024732|gb|DQ422606| Uncultured bacterium clone med-tb04-0m-f5 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-f5 putative proteorhodopsin gene, partial cds. DQ422606 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCCATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGCTTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAGCAAAGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIVGMAGWIYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCC---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGC---TTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAGCAAAGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_DQ422513 [IV-Alpha8-18B2] clone_med-tb04-50m-f5_DQ422513 gi|90024546|gb|DQ422513| Uncultured bacterium clone med-tb04-50m-f5 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-f5 putative proteorhodopsin gene, partial cds. DQ422513 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATTGACTGGCTAATTACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCCATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGCTTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAGCAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIVGMAGWIYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCC---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGC---TTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAGCAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_1112715469539 [IV-Alpha8-18B2] JCVI_ORF_1112715469539_GS122a_Open_Ocean_2m jcvi|1112715469539| 1112715469539 JCVI ORF 1112715469539 1112715469539 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 30-sept-05 Open_Ocean/2m_depth/S_35.8_psu/GS122a/International_waters_between_Madagascar_and_South_Africa/Indian_Ocean Indian Ocean marine -30.898333 40.420277 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAATAAACTAAAATTGTTTGCTTTAGCAGCTATGGGCCTGATAGGTTTTTCAGGAATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGATTTCGTAGGAATTTCATTTTGGATCATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCTTAGAAGTTGGTAACGTAGCAGCAGGCTGGAGAACTTCAGTTATTGTTGCTGGGCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGATTCGCCAACAGTTTACAGATATATTGACTGGTTAATCACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATTGGTAAAGCGAACTCTGGAATGTTCTGGAGATTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTTTAGGCTTTATAGTCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGAAGCAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTAGGTTGGGCTATTTACCCATTAGGTTACATATTTGGTTACCTAACAGGTGGAGTAGACGCTGACTCGCTTAACGTTGTTTACAACTTAGCAGACTTTATTAATAAGATTGCATTTGGTCTAGTAATTTGGGCTGCTGCAACTACTTCAGCTGGAAAACGAGCTAAG MNKLKLFALAAMGLIGFSGIAIAADATMLMQDDFVGISFWIISMGMLAATAFFFLEVGNVAAGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIVGMAGWVYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDADSLNVVYNLADFINKIAFGLVIWAAATTSAGKRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAATAAACTAAAATTGTTTGCTTTAGCAGCTATGGGCCTGATAGGTTTTTCAGGAATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGATTTCGTAGGAATTTCATTTTGGATCATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCTTAGAAGTTGGTAACGTAGCAGCA---GGCTGGAGAACTTCAGTTATTGTTGCTGGGCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGATTCGCCAACAGTTTACAGATATATTGACTGG------------------------TTAATCACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCGAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTTTAGGC---TTTATAGTCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGAAGCAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTACATATTTGGTTACCTA---------------------------------------ACAGGTGGAGTAGACGCTGACTCGCTTAACGTTGTTTACAACTTAGCAGACTTTATTAATAAGATTGCATTTGGTCTAGTAATTTGGGCTGCTGCAACTACTTCA---GCTGGAAAACGAGCTAAG--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MNKLKLFALAAMGLIGFSGIAIAADATMLMQDDFVGISFWIISMGMLAATAFFFLEVGNVAA-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDADSLNVVYNLADFINKIAFGLVIWAAATTS-AGKRAK----------------------------------- [IV-Alpha8-18B2]_DQ422475 [IV-Alpha8-18B2] clone_med-tb04-50m-c3_DQ422475 gi|90024470|gb|DQ422475| Uncultured bacterium clone med-tb04-50m-c3 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-c3 putative proteorhodopsin gene, partial cds. DQ422475 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATCACTGTACCATTACAGATGGTAGAATTTTACTTAATTCTAGCTGCTATTGGTAAAGCGAACTCTGGAATGTTCTGGAGATTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTTTAGGCTTTATAGTCGGAATGGCAGGTTGGGTATATATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGAAGCAAGGCTCTTGTAACGGCTTTTGGTGCAATGAGAATGATTGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIVGMAGWVYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATCACTGTACCATTACAGATGGTAGAATTTTACTTAATTCTAGCTGCT---------ATT---GGTAAAGCGAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTTTAGGC---TTTATAGTCGGAATGGCAGGTTGGGTATATATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGAAGCAAGGCTCTT---GTA---ACG---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EF088591 [IV-Alpha8-18B2] E400006_env_samples_EF088591 gi|126843423|gb|EF088591| Uncultured bacterium clone E400006 putative proteorhodopsin gene, partial cds Uncultured bacterium clone E400006 putative proteorhodopsin gene, partial cds EF088591 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) unknown (R105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na Bering_Sea_surface_water_sample Arctic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTGGCCGCTACTGTATTCTTCTTTATGGAAGTAGGCAACGTCGCAACTGGTTGGAGAACGTCAGTTATTGTTGCTGGTCTAGTAACAGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGTGACTCGCCAACAGTATACAGATACATTGACTGGTTAATCACTGTGTCATTACGGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATTAATGCAACACTTGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCATCGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATTGTTACAGTAGGTTGGGCGATCTACCCA MVAATVFFFMEVGNVATGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVSLRMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTATTCTTCTTTATGGAAGTAGGCAACGTCGCAACT---GGTTGGAGAACGTCAGTTATTGTTGCTGGTCTAGTAACAGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGTGACTCGCCAACAGTATACAGATACATTGACTGG------------------------TTAATCACTGTGTCATTACGGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCA------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCATCGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCGATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMEVGNVAT-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVSLRMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EF079855 [IV-Alpha8-18B2] clone_ID11035_EF079855 gi|126361799|gb|EF079855| Uncultured bacterium clone ID11035 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID11035 putative proteorhodopsin gene, partial cds. EF079855 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) unknown (R105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na #na Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGGTAGCCGCTACTGTATTCTTCTTTATGGAAGTAGGCAACGTCGCAACTGGTTGGAGAACGTCAGTTATTGTTGCTGGTCTGGTAACAGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGTGACTCGCCAACAGTATACAGATACATTGACTGGTTAATCACTGTGTCATTACGGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATTAATGCAACACTTGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCATCGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATTGTTACAGTAGGGTGGGCAATATACCCA MVAATVFFFMEVGNVATGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVSLRMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTATTCTTCTTTATGGAAGTAGGCAACGTCGCAACT---GGTTGGAGAACGTCAGTTATTGTTGCTGGTCTGGTAACAGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGTGACTCGCCAACAGTATACAGATACATTGACTGG------------------------TTAATCACTGTGTCATTACGGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCA------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCATCGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGGTGG---------GCAATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMEVGNVAT-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVSLRMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_DQ887780 [IV-Alpha8-18B2] clone_PF10004_DQ887780 gi|116294260|gb|DQ887780| Uncultured bacterium clone PF10004 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF10004 putative proteorhodopsin gene, partial cds. DQ887780 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2007 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGGTGGCCGCTACTGCTTTCTTCTTTATGGAAGTAGGCAACGTCGCAACTGGTTGGAGAACTTCAGTAATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTGGCTACTGGTGACTCGCCAACAGTATACAGATACATTGACTGGTTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTAACAAAGCAAATTCTGGAGTGTTCTGGAGATTGTTAATTGGTTCATTAGTGATGCTTATCGGTGGATACTTAGGTGAAGCAGGATATATAAATGCTACACTTGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCATCGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATTGTTACTGTAGGTTGGGCCATCTATCCA MVAATAFFFMEVGNVATGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAINKANSGVFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCTTTCTTCTTTATGGAAGTAGGCAACGTCGCAACT---GGTTGGAGAACTTCAGTAATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTG------------------------------GCTACT---------------------GGTGACTCGCCAACAGTATACAGATACATTGACTGG------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---AACAAAGCAAATTCT---GGAGTG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTGATGCTTATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATA------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCATCGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMEVGNVAT-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-NKANS-GV------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_DQ887793 [IV-Alpha8-18B2] clone_PF10019_DQ887793 gi|116294286|gb|DQ887793| Uncultured bacterium clone PF10019 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF10019 putative proteorhodopsin gene, partial cds. DQ887793 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2007 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na CTATTAGCGTCTACTGTATTCTTCTTTATGGAAGTAGGCAACGTCGCAACTGGTTGGAGAACTTCAGTAATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTGGCTACTGGTGACTCTCCAACAGTATACAGATACATTGACTGGTTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTAACAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTGATGCTTATCGGTGGATACTTAGGTGAAGCAGGATATATAAATGCTACACTTGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCATCGAAGAGTGGTAACAAAGCTCTTGTAACCGCATTCGGAGCAATGAGAATGATTGTTACTGTAGGCTGGGCCATATATCCA LLASTVFFFMEVGNVATGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGTCTACTGTATTCTTCTTTATGGAAGTAGGCAACGTCGCAACT---GGTTGGAGAACTTCAGTAATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTG------------------------------GCTACT---------------------GGTGACTCTCCAACAGTATACAGATACATTGACTGG------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---AACAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTGATGCTTATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATA------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCATCGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACC---GCA---TTC---GGA---GCAATG---AGAATGATTGTTACTGTA---------------------------------------------------------------GGCTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------LLASTVFFFMEVGNVAT-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_DQ887781 [IV-Alpha8-18B2] clone_PF10005_DQ887781 gi|116294262|gb|DQ887781| Uncultured bacterium clone PF10005 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF10005 putative proteorhodopsin gene, partial cds. DQ887781 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2007 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGGTCGCCGCTACTGTATTCTTCTTCATGGAGAGAGGTACAGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTGGCTACTGGTGACTCGCCAACAGTATACAGATACATTGACTGGTTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTAACAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTGATGCTTATCGGTGGATACCTAGGTGAAGCAGGATATATAAATGCTACACTTGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCATCGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATTGTTACTGTAGGGTGGGCTATTTATCCA MVAATVFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCCGCTACTGTATTCTTCTTCATGGAGAGAGGTACAGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGATGTATGGGTG------------------------------GCTACT---------------------GGTGACTCGCCAACAGTATACAGATACATTGACTGG------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---AACAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTGATGCTTATCGGTGGATACCTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATA------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCATCGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATTGTTACTGTA---------------------------------------------------------------GGGTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EU224298 [IV-Alpha8-18B2] clone_1812231_EU224298 gi|164698768|gb|EU224298| Uncultured bacterium clone 1812231 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 1812231 putative proteorhodopsin gene, partial cds. EU224298 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2008 #na surface water sample Indian Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGCTTGCCGCTACTGTTTTCTTCTTTATGGAAGTAGGCAACGTCGCAACTGGTTGGAGAACGTCAGTAATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTAGCTACTGGTGACTCGCCAACAGTATACAGATACATTGACTGGTTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTGATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATCAATGCTACACTTGGTTTCATCATTGGAATGGCAGGTTGGATATACATTCTTTATGAAGTATTCTCTGGAGAGGCTGGTAAAGCTGCACAGAAGAGTGGTAATAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATTGTTACTGTAGGCTGGGCAATCTATCCA MLAATVFFFMEVGNVATGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKAAQKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACTGTTTTCTTCTTTATGGAAGTAGGCAACGTCGCAACT---GGTTGGAGAACGTCAGTAATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTA------------------------------GCTACT---------------------GGTGACTCGCCAACAGTATACAGATACATTGACTGG------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTGATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATTGGAATGGCAGGTTGGATATACATTCTTTATGAAGTA---------------TTC------TCT---GGAGAGGCTGGTAAAGCTGCACAGAAG------AGT---GGTAATAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATTGTTACTGTA---------------------------------------------------------------GGCTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFMEVGNVAT-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKAAQK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_DQ887791 [IV-Alpha8-18B2] clone_PF10017_DQ887791 gi|116294282|gb|DQ887791| Uncultured bacterium clone PF10017 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF10017 putative proteorhodopsin gene, partial cds. DQ887791 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2007 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGCTCGCCGCTACTGTGTTCTTCTTTATGGAAGTAGGCAACGTCGCAACTGGTTGGAGAACGTCAGTAATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTGGCTACAGGTGACTCGCCAACAGTATACAGATACATTGACTGGTTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTTTGGAGATTGTTAATTGGTTCATTAGTGATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATCAATGCTACACTTGGTTTCATCATTGGAATGGCAGGTTGGATATACATTCTTTATGAAGTATTCTCTGGTGAAGCTAGTAAAGCTGCACAGAAGAGTGGTAATAAAGCTCTTGTTACTGCATTCGGAGCAATGAGAATGATCGTTACAGTAGGGTGGGCGATCTACCCA MLAATVFFFMEVGNVATGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEASKAAQKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTCGCCGCTACTGTGTTCTTCTTTATGGAAGTAGGCAACGTCGCAACT---GGTTGGAGAACGTCAGTAATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTG------------------------------GCTACA---------------------GGTGACTCGCCAACAGTATACAGATACATTGACTGG------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTTTGGAGA---TTGTTAATTGGTTCATTAGTGATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATTGGAATGGCAGGTTGGATATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCTAGTAAAGCTGCACAGAAG------AGT---GGTAATAAAGCTCTT---GTT---ACT---GCA---TTC---GGA---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGGTGG---------GCGATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFMEVGNVAT-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEASKAAQK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EU915753 [IV-Alpha8-18B2] PF75083_env_samples_EU915753 gi|229358388|gb|EU915753| Uncultured microorganism clone PF75083 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF75083 putative proteorhodopsin gene, partial cds EU915753 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTATTAGCGTCTACTGTATTCTTCTTTATGGAAGTAGGCAACGTCGCAACTGGTTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATACATTAATGCTACACTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTACGAAGTATTCTCAGGTGAGGCTGGTAAAGCTGCACAGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATCGTTACAGTAGGTTGGGCGATCTAT LLASTVFFFMEVGNVATGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAQKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGTCTACTGTATTCTTCTTTATGGAAGTAGGCAACGTCGCAACT---GGTTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTACGAAGTA---------------TTC------TCA---GGTGAGGCTGGTAAAGCTGCACAGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCGATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------LLASTVFFFMEVGNVAT-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAQK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EF107103 [IV-Alpha8-18B2] HF10_45G01_genomic_EF107103 gi|119713268|gb|EF107103| Uncultured marine bacterium HF10 45G01 genomic sequence Uncultured marine bacterium HF10 45G01 genomic sequence EF107103 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:415446 genomic_DNA other 02APR2008 #na North_Pacific_Subtropical_Gyre/Hawaii_Ocean_Time_Series_Station_ALOHA/10m_below_sea_surface Pacific Ocean marine 22.75 -158 Proteorhodopsin photosystem gene clusters exhibit coevolutionary trends and shared ancestry among diverse marine microbial phyla McCarren,J. and DeLong,E.F. Environ. Microbiol. 9 (4), 846858 (2007) 17359257 #na ATGAATAAACTTAAACTGTTTGCTTTAGCAGCTATGGGCTTGATTGGTTTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGAACCAAGATGACTTCGTGGGAATTTCATTCTGGGTCATCTCTATGGGGATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGTTGGCAACGTCGCAGCTGGTTGGAGAACATCAGTAATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTGGCTACTGGAGACTCGCCAACAGTATACAGATACATTGACTGGTTAATCACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATTAATAAAGCAAACTCTGGAATGTTCTGGAGATTATTAATTGGTTCATTAGTGATGCTTATCGGTGGATACTTAGGTGAAGCAGGTTACATTAATGCTACACTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCATCAAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCTATGAGAATGATTGTTACTGTAGGTTGGGCAATTTATCCATTAGGTTATGTATTTGGTTACTTAACTGGTGGTGTAGACGCTGACTCACTTAACGTCGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATTTGGGCTGCTGCAACTAGTTCTGCAGGAAAAAGAGCTAAG MNKLKLFALAAMGLIGFSGIAIAADATMLNQDDFVGISFWVISMGMLAATAFFFMEVGNVAAGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDADSLNVVYNLADFINKIAFGLVIWAAATSSAGKRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAATAAACTTAAACTGTTTGCTTTAGCAGCTATGGGCTTGATTGGTTTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGAACCAAGATGACTTCGTGGGAATTTCATTCTGGGTCATCTCTATGGGGATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGTTGGCAACGTCGCAGCT---GGTTGGAGAACATCAGTAATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTG------------------------------GCTACT---------------------GGAGACTCGCCAACAGTATACAGATACATTGACTGG------------------------TTAATCACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATT---AATAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTATTAATTGGTTCATTAGTGATGCTTATCGGTGGATACTTAGGTGAA---------GCA------------------GGT------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCATCAAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCTATG---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCAATTTATCCATTAGGTTATGTATTTGGTTACTTA---------------------------------------ACTGGTGGTGTAGACGCTGACTCACTTAACGTCGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATTTGGGCTGCTGCAACTAGTTCT---GCAGGAAAAAGAGCTAAG--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MNKLKLFALAAMGLIGFSGIAIAADATMLNQDDFVGISFWVISMGMLAATAFFFMEVGNVAA-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDADSLNVVYNLADFINKIAFGLVIWAAATSS-AGKRAK----------------------------------- [IV-Alpha8-18B2]_EU079228 [IV-Alpha8-18B2] NASB_96_env_samples_EU079228 gi|156106615|gb|EU079228| Uncultured organism clone NASB 96 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 96 putative proteorhodopsin gene, partial cds EU079228 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGCTACATTGACTGGTTAATCACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATTAACAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATACATTAATGCTACATTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTGTGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCACAGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATTGTTACAGTAGGCTGGGCAATATAT RYIDWLITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILCEVFSGEAGKAAQKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTACATTGACTGG------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATT---AACAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACATTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTGTGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCACAGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGCTGG---------GCAATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILCEV-----F--S-GEAGKAAQK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_DQ203369 [IV-Alpha8-18B2] MedHO102C5_env_samples_DQ203369 gi|77547186|gb|DQ203369| Uncultured bacterium clone MedHO102C5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102C5 predicted proteorhodopsin gene, partial cds DQ203369 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGTTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATCGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGCTTATCGGTGGTTACTTAGGTGAAGCAGGATATATTAATGCTACACTAGGTTTCATTATCGGAATGGCAGGTTGGGTATATATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAGCTGCAGCGAAGAGTGGTAACAAGGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATTGTTACAGTAGGTTGGGCCATTTATCCA RYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------TTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGCTTATCGGTGGTTACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATTATCGGAATGGCAGGTTGGGTATATATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAGCTGCAGCGAAG------AGT---GGTAACAAGGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_DQ203490 [IV-Alpha8-18B2] medHO1202_env_samples_DQ203490 gi|77547428|gb|DQ203490| Uncultured bacterium clone medHO1202 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO1202 predicted proteorhodopsin gene, partial cds DQ203490 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGTTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATCGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGCTTATCGGTGGTTACTTAGGTGAAGCAGGATATATTAATGCTACACTAGGTTTCATTATCGGAATGGCAGGTTGGGTATATATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTTGGAGCAATGAGAATGATTGTTACAGTAGGTTGGGCGATTTATCCA RYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------TTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGCTTATCGGTGGTTACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATTATCGGAATGGCAGGTTGGGTATATATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTT---GGA---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCGATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_DQ203792 [IV-Alpha8-18B2] SS114a0H6_env_samples_DQ203792 gi|77548032|gb|DQ203792| Uncultured bacterium clone SS114a0H6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0H6 predicted proteorhodopsin gene, partial cds DQ203792 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGTTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATCGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATCGGTTCACTAGTAATGCTTATCGGTGGATACTTAGGTGAAGCAGGATATATTAATGCTACACTAGGTTTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAGAGTGGTAACAAGGCTCTTGTAACTGCATTTGGAGCAATGAGAATGATTGTTACAGTAGGTTGGGCCATTTATCCA RYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------TTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCACTAGTAATGCTTATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAG------AGT---GGTAACAAGGCTCTT---GTA---ACT---GCA---TTT---GGA---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EU079217 [IV-Alpha8-18B2] NASB_82_env_samples_EU079217 gi|156106593|gb|EU079217| Uncultured organism clone NASB 82 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 82 putative proteorhodopsin gene, partial cds EU079217 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGTTACATTGACTGGTTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATCGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTTATCGGTGGTTACTTAGGTGAAGCAGGATATATTAATGCTACACTAGGTTTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAGAGTGGTAACAAGGCTCTTGTAACTGCACTTGGAGCAATGAGAATGATTGTTACAGTAGGATGGGCAATTTAT RYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTALGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTACATTGACTGG------------------------TTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTTATCGGTGGTTACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAG------AGT---GGTAACAAGGCTCTT---GTA---ACT---GCA---CTT---GGA---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGATGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-L-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_DQ422638 [IV-Alpha8-18B2] clone_med-tb04-20m-a4_DQ422638 gi|90024796|gb|DQ422638| Uncultured bacterium clone med-tb04-20m-a4 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-a4 putative proteorhodopsin gene, partial cds. DQ422638 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATCGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTTATCGGTGGTTACTTAGGTGAAGCAGGATATATTAATGCTACACTAGGTTTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAGAGTGGTAACAAGGCTCTTGTAACTGCATTTGGAGCAATGAGAATGATTGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTTATCGGTGGTTACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAG------AGT---GGTAACAAGGCTCTT---GTA---ACT---GCA---TTT---GGA---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_DQ422723 [IV-Alpha8-18B2] clone_med-tb04-20m-h6_DQ422723 gi|90024966|gb|DQ422723| Uncultured bacterium clone med-tb04-20m-h6 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-h6 putative proteorhodopsin gene, partial cds. DQ422723 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATTGACTGGCTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATCGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATCGGTTCACTAGTAATGCTTATCGGTGGATACTTAGGTGAAGCAGGATATATTAATGCTACACTAGGTTTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAGAGTGGTAACAAGGCTCTTGTAACTGCATTTGGAGCAATGAGAATGATTGTTACAGTAGGTTGGGCTATTTACCCA RYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCACTAGTAATGCTTATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAG------AGT---GGTAACAAGGCTCTT---GTA---ACT---GCA---TTT---GGA---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_1112711476595 [IV-Alpha8-18B2] JCVI_ORF_1112711476595_GS121_Open_Ocean_2m jcvi|1112711476595| 1112711476595 JCVI ORF 1112711476595 1112711476595 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 29-sept-05 Open_Ocean/2m_depth/S_35.4_psu/GS121/International_water_between_Madagascar_and_South_Africa/Indian_Ocean Indian Ocean marine -29.348888 43.215557 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCTCTAGCAGCTATGACCTTAATAGGTTTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAACGTCGCATCAGGCTGGAGAACGTCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCACCAACTGTTTACAGATACATTGACTGGTTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATCGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATCGGTTCACTAGTAATGCTTATCGGTGGATACTTAGGTGAAGCAGGATATATTAATGCTACACTAGGTTTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGAAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATTGTTACTGTAGGTTGGGCAATTTACCCATTAGGTTATGTATTTGGTTACTTAACTGGTGGAGTAGATGCTAATTCACTTAACGTTGTTTATAACTTAGCTGACTTCATTAACAAAATTGCTTTCGGTCTAGTAATCTGGGCTGCGGCAACTAGTTCAAGCGGAAAAAGAGCTAAG MKKLKLFALAAMTLIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAATSSSGKRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCTCTAGCAGCTATGACCTTAATAGGTTTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAACGTCGCATCA---GGCTGGAGAACGTCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCACCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCACTAGTAATGCTTATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGAAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCATTAGGTTATGTATTTGGTTACTTA---------------------------------------ACTGGTGGAGTAGATGCTAATTCACTTAACGTTGTTTATAACTTAGCTGACTTCATTAACAAAATTGCTTTCGGTCTAGTAATCTGGGCTGCGGCAACTAGTTCA---AGCGGAAAAAGAGCTAAG--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALAAMTLIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAATSS-SGKRAK----------------------------------- [IV-Alpha8-18B2]_1112716369757 [IV-Alpha8-18B2] JCVI_ORF_1112716369757_GS115_Open_Ocean_2m jcvi|1112716369757| 1112716369757 JCVI ORF 1112716369757 1112716369757 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 16-AUG-2005 Open_Ocean/2m_depth/S_33.2_psu/GS115/Indian_Ocean/Indian_Ocean Indian Ocean marine -4.6625 60.523056 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf AAATTGTTTGCTTTAGCAGCTATGGCTCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGAGCCAAGATGACTTCGTCGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTGGCAGCTACTGCTTTCTTTTTCATGGAAGCGGGCAACGTCGCATCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCGCCAACTGTATACAGATACATTGACTGGTTAATCACAGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGTTAATTGGTGGATACTTAGGTGAAGCTGGTTATATTAATGAAACACTTGGTTTCATAGTTGGAATGGCAGGTTGGATATACATTCTATATGAAATATTTTCAGGTGAAGCTGGTAAAGCTGCAGCTAAAAGTGGTAACAAAGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTAGGTTGGGCAATTTATCCACTAGGTTACGTATTTGGTTACCTAACAGGTGGTGTAGATGCTGACTCACTTAACGTTGTTTACAACTTAGCTGACTTTGTTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCTGCGGGTAGAAGAGCAAAG KLFALAAMALIGFSGIAIAADATMLSQDDFVGISFWVISMGMLAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINETLGFIVGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDADSLNVVYNLADFVNKIAFGLVIWAAATSSAGRRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATTGTTTGCTTTAGCAGCTATGGCTCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGAGCCAAGATGACTTCGTCGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTGGCAGCTACTGCTTTCTTTTTCATGGAAGCGGGCAACGTCGCATCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCGCCAACTGTATACAGATACATTGACTGG------------------------TTAATCACAGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGTTAATTGGTGGATACTTAGGTGAA---------GCT------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------AATGAA------------------ACACTTGGT---TTCATAGTTGGAATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTT------TCA---GGTGAAGCTGGTAAAGCTGCAGCTAAA------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTATCCACTAGGTTACGTATTTGGTTACCTA---------------------------------------ACAGGTGGTGTAGATGCTGACTCACTTAACGTTGTTTACAACTTAGCTGACTTTGTTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCT---GCGGGTAGAAGAGCAAAG--------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------KLFALAAMALIGFSGIAIAADATMLSQDDFVGISFWVISMGMLAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NE------TLG-FIVGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDADSLNVVYNLADFVNKIAFGLVIWAAATSS-AGRRAK----------------------------------- [IV-Alpha8-18B2]_1105153575796 [IV-Alpha8-18B2] JCVI_ORF_1105153575796_GS034_Coastal_3m jcvi|1105153575796| 1105153575796 JCVI ORF 1105153575796 1105153575796 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 19-FEB-2004 Coastal/3m_depth/S_n.a/GS034/North_Seamore_Island/Galapagos_Islands North Sea marine -0.38305557 -90.279724 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAACTGTTTGCTTTAGCAGCTATGACTTTGATCGGTTTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTAGGAATATCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCGGGCAACGTCGCATCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATTACTGTACCTTTACAGATGGTAGAATTTTACTTAATTCTAGCAGCTATCGGTAAAGCGAACGCTGGAATGTTCTGGAGATTGTTAATCGGTTCACTAGTTATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATTAATTCTACACTAGGTTTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCTAAAAGTGGTAACAAAGCTTTAGTAACAGCTTTTGGTGCTATGAGAATGATCGTTACAGTAGGTTGGGCTATTTACCCATTAGGTTATGTATTTGGTTACTTAACTGGTGGTGTAGACGCTGCTTCACTTAACGTCGTTTATAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATTTGGGCTGCTGCAACTAGTTCAAGCGGAAAAAGAGCTAAG MKKLKLFALAAMTLIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANAGMFWRLLIGSLVMLIGGYLGEAGYINSTLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDAASLNVVYNLADFINKIAFGLVIWAAATSSSGKRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAACTGTTTGCTTTAGCAGCTATGACTTTGATCGGTTTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTAGGAATATCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCGGGCAACGTCGCATCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATTACTGTACCTTTACAGATGGTAGAATTTTACTTAATTCTAGCAGCT---------ATC---GGTAAAGCGAACGCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCACTAGTTATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATTCT------------------ACACTAGGT---TTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCTAAA------AGT---GGTAACAAAGCTTTA---GTA---ACA---GCT---TTT---GGT---GCTATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTATGTATTTGGTTACTTA---------------------------------------ACTGGTGGTGTAGACGCTGCTTCACTTAACGTCGTTTATAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATTTGGGCTGCTGCAACTAGTTCA---AGCGGAAAAAGAGCTAAG--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALAAMTLIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANA-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NS------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDAASLNVVYNLADFINKIAFGLVIWAAATSS-SGKRAK----------------------------------- [IV-Alpha8-18B2]_DQ203559 [IV-Alpha8-18B2] MedHO1202G10_env_samples_DQ203559 gi|77547566|gb|DQ203559| Uncultured bacterium clone MedHO1202G10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202G10 predicted proteorhodopsin gene, partial cds DQ203559 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGTTAATTACAGTGCCATTACAAATGGTAGAATTCTATTTAATTCTAGCAGCTATCGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCAGGATACATTAATGCTACACTTGGTTTCATCATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGTAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGTTGGGCCATATATCCA RYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------TTAATTACAGTGCCATTACAAATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGTAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_1105148820272 [IV-Alpha8-18B2] JCVI_ORF_1105148820272_GS030_Warm_Seep_19m jcvi|1105148820272| 1105148820272 JCVI ORF 1105148820272 1105148820272 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 09-FEB-2004 Warm_Seep/19m_depth/S_n.a/GS030/Warm_seep/Roca_Redonda/Galapagos_Islands Red Sea marine 0.27222222 -91.63333 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCTTTAGCAGCTATGGCTCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTCGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAATGTCGCATCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATACATTAATGCTACACTTGGTTTCATCATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGTAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGTTGGGCAATTTACCCATTAGGTTATGTATTTGGTTACTTAACTGGTGGTGTAGACGCTAACTCACTAAACGTTGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCTGCGGGAAGAAGAGCTAAG MKKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAATSSAGRRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCTTTAGCAGCTATGGCTCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTCGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAATGTCGCATCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGTAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCATTAGGTTATGTATTTGGTTACTTA---------------------------------------ACTGGTGGTGTAGACGCTAACTCACTAAACGTTGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCT---GCGGGAAGAAGAGCTAAG--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAATSS-AGRRAK----------------------------------- [IV-Alpha8-18B2]_1105147077076 [IV-Alpha8-18B2] JCVI_ORF_1105147077076_GS021_Coastal_2m jcvi|1105147077076| 1105147077076 JCVI ORF 1105147077076 1105147077076 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 19-janv-04 Coastal/2m_depth/S_30.7_psu/GS021/Gulf_of_Panama/Eastern_Tropical_Pacific Pacific Ocean marine 8.129167 -79.69111 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCTCTAGCAGCTATGACCTTGATAGGTTTTTCAGGTGTAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTAGGAATTTCATTCTGGATCATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAATGTCGCATCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATCGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCACTAGTAATGCTTATCGGTGGTTACTTAGGTGAAGCAGGATATATTAATGCTACACTTGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATTGTTACAGTAGGTTGGGCGATTTATCCATTAGGTTATGTATTTGGTTACTTAACTGGTGGTGTAGACGCTAATTCACTTAACGTTGTTTATAACTTAGCTGACTTCATTAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCGGCAACTAGTTCTGCAGGAAAAAGAGCTAAG MKKLKLFALAAMTLIGFSGVAIAADATMLMQDDFVGISFWIISMGMLAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAATSSAGKRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCTCTAGCAGCTATGACCTTGATAGGTTTTTCAGGTGTAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTAGGAATTTCATTCTGGATCATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAATGTCGCATCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCACTAGTAATGCTTATCGGTGGTTACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCGATTTATCCATTAGGTTATGTATTTGGTTACTTA---------------------------------------ACTGGTGGTGTAGACGCTAATTCACTTAACGTTGTTTATAACTTAGCTGACTTCATTAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCGGCAACTAGTTCT---GCAGGAAAAAGAGCTAAG--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALAAMTLIGFSGVAIAADATMLMQDDFVGISFWIISMGMLAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAATSS-AGKRAK----------------------------------- [IV-Alpha8-18B2]_1105152346628 [IV-Alpha8-18B2] JCVI_ORF_1105152346628_GS027_Coastal_3m jcvi|1105152346628| 1105152346628 JCVI ORF 1105152346628 1105152346628 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 04-FEB-2004 Coastal/3m_depth/S_34.9_psu/GS027/Devils_Crown/Floreana_Island/Galapagos_Islands Pacific Ocean marine -1.2161111 -90.422775 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCTCTAGCAGCTATGACCTTGATAGGTTTTTCAGGTGTAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGAAACGTCGCAGCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATCGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCACTAGTAATGCTTATCGGTGGTTACTTAGGTGAAGCAGGATATATTAATGCTACACTAGGTTTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAGAGTGGTAATAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATTGTTACAGTAGGTTGGGCGATTTACCCATTAGGTTATGTATTTGGTTACCTAACTGGTGGTGTAGATGCTAATTCACTTAACGTTGTTTATAACTTAGCTGACTTCATTAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCGGCAACTAGTTCTGCAGGAAAAAGAGCTAAG MKKLKLFALAAMTLIGFSGVAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVAAGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAATSSAGKRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCTCTAGCAGCTATGACCTTGATAGGTTTTTCAGGTGTAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGAAACGTCGCAGCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCACTAGTAATGCTTATCGGTGGTTACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAG------AGT---GGTAATAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCGATTTACCCATTAGGTTATGTATTTGGTTACCTA---------------------------------------ACTGGTGGTGTAGATGCTAATTCACTTAACGTTGTTTATAACTTAGCTGACTTCATTAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCGGCAACTAGTTCT---GCAGGAAAAAGAGCTAAG--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALAAMTLIGFSGVAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVAA-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAATSS-AGKRAK----------------------------------- [IV-Alpha8-18B2]_1105146946952 [IV-Alpha8-18B2] JCVI_ORF_1105146946952_GS017_Open_Ocean_2m jcvi|1105146946952| 1105146946952 JCVI ORF 1105146946952 1105146946952 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 09-janv-04 Open_Ocean/2m_depth/S_35.8_psu/GS017/Yucatan_Channel/Caribbean_Sea Caribbean Sea marine 20.5225 -85.41361 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAACTGTTTGCTTTAGCAGCTATGGCTCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAATGTCGCATCAGGTTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCGCCAACCGTTTACAGATACATTGACTGGTTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATCAATGCTACACTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCTAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGTTGGGCGATTTACCCATTAGGTTATGTATTTGGTTACTTAACTGGTGGTGTAGACGCTAACTCACTAAACGTCGTTTATAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTTGTAATCTGGGCTGCTGCAACTAGTTCTGCAGGAAAAAGAGCTAAG MKKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAATSSAGKRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAACTGTTTGCTTTAGCAGCTATGGCTCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAATGTCGCATCA---GGTTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCGCCAACCGTTTACAGATACATTGACTGG------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCTAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCGATTTACCCATTAGGTTATGTATTTGGTTACTTA---------------------------------------ACTGGTGGTGTAGACGCTAACTCACTAAACGTCGTTTATAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTTGTAATCTGGGCTGCTGCAACTAGTTCT---GCAGGAAAAAGAGCTAAG--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAATSS-AGKRAK----------------------------------- [IV-Alpha8-18B2]_1105141785650 [IV-Alpha8-18B2] JCVI_ORF_1105141785650_GS035_Coastal_2m jcvi|1105141785650| 1105141785650 JCVI ORF 1105141785650 1105141785650 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 01-mars-04 Coastal/2m_depth/S_34.5_psu/GS035/Wolf_Island/Galapagos_Islands Pacific Ocean marine 1.3891667 -91.81695 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCTCTAGCAGCTATGACCTTGATAGGTTTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGAGCCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCGGGCAATGTCGCATCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCACCAACTGTTTACAGATACATTGACTGGTTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCGAACTCTGGAATGTTCTGGAGATTATTAATTGGTTCATTAGTGATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATTAATGCTACACTAGGTTTCATCATTGGAATGGCAGGTTGGGTATACATTCTATATGAAGTATTCTCAGGTGAATCTGGTAGAGCTGCGGCGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATTGTTACAGTAGGTTGGGCAATTTACCCATTAGGTTATGTATTCGGTTACTTAACTGGTGGTGTAGATGCTGACTCACTTAACGTTGTTTACAACTTAGCTGATTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCAAGCGGAAAAAGAGCTAAG MKKLKLFALAAMTLIGFSGIAIAADATMLSQDDFVGISFWVISMGMLAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGESGRAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDADSLNVVYNLADFINKIAFGLVIWAAATSSSGKRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCTCTAGCAGCTATGACCTTGATAGGTTTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGAGCCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCGGGCAATGTCGCATCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCACCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCGAACTCT---GGAATG------------------------------------TTCTGGAGA---TTATTAATTGGTTCATTAGTGATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATCATTGGAATGGCAGGTTGGGTATACATTCTATATGAAGTA---------------TTC------TCA---GGTGAATCTGGTAGAGCTGCGGCGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCATTAGGTTATGTATTCGGTTACTTA---------------------------------------ACTGGTGGTGTAGATGCTGACTCACTTAACGTTGTTTACAACTTAGCTGATTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCA---AGCGGAAAAAGAGCTAAG--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALAAMTLIGFSGIAIAADATMLSQDDFVGISFWVISMGMLAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GESGRAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDADSLNVVYNLADFINKIAFGLVIWAAATSS-SGKRAK----------------------------------- [IV-Alpha8-18B2]_1112677794897 [IV-Alpha8-18B2] JCVI_ORF_1112677794897_GS114_Open_Ocean_2m jcvi|1112677794897| 1112677794897 JCVI ORF 1112677794897 1112677794897 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 15-AUG-2005 Open_Ocean/2m_depth/S_33.1_psu/GS114/500_Miles_west_of_the_Seychelles_in_the_Indian_Ocean/Indian_Ocean Indian Ocean marine -4.990278 64.97667 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TTGATAGGTTTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTCGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAATGTCGCATCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTTCTACTGGAGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGTATGTTCTGGAGATTGTTAATTGGTTCATTGGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATACATTAATGCTACACTTGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAATCTGGTAGAGCTGCAGCAAAAAGTGGTAACAAAGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCAATTTACCCATTAGGTTACGTATTTGGTTACTTAACTGGTGGTGTAGATGCTGACTCACTTAACGTCGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATTTGGGCTGCTGCAACTAGTTCTGCGGGAAGAAGAGCTAAG LIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVSTGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGESGRAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDADSLNVVYNLADFINKIAFGLVIWAAATSSAGRRAK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAGGTTTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTCGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAATGTCGCATCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------TCTACT---------------------GGAGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGTATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTGGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAATCTGGTAGAGCTGCAGCAAAA------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCATTAGGTTACGTATTTGGTTACTTA---------------------------------------ACTGGTGGTGTAGATGCTGACTCACTTAACGTCGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATTTGGGCTGCTGCAACTAGTTCT---GCGGGAAGAAGAGCTAAG--------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------LIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------ST-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GESGRAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDADSLNVVYNLADFINKIAFGLVIWAAATSS-AGRRAK----------------------------------- [IV-Alpha8-18B2]_1105130523512 [IV-Alpha8-18B2] JCVI_ORF_1105130523512_GS000b_Open_Ocean_5m jcvi|1105130523512| 1105130523512 JCVI ORF 1105130523512 1105130523512 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.22_0.8 other #na 26-FEB-2003 Open_Ocean/5m_depth/S_36.7_psu/GS000b/Sargasso_Station_11/Sargasso_Sea Sargasso Sea marine 31.175 -64.32433 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAACTGTTTGCTTTAGCAGCTATGGCCCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTCGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAATGTCGCATCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATCGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGTTATATTAATGCTACACTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTGTTCTCAGGTGAATCTGGTAAAGCTGCAGCAAAAAGTGGTAACAAAGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCAATTTACCCATTAGGTTACGTATTTGGTTACTTAACTGGTGGTGTAGACGCTGACTCACTTAACGTCGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCTGCGGGAAGAAGAGCTAAG MKKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGESGKAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDADSLNVVYNLADFINKIAFGLVIWAAATSSAGRRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAACTGTTTGCTTTAGCAGCTATGGCCCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTCGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAATGTCGCATCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTG---------------TTC------TCA---GGTGAATCTGGTAAAGCTGCAGCAAAA------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCATTAGGTTACGTATTTGGTTACTTA---------------------------------------ACTGGTGGTGTAGACGCTGACTCACTTAACGTCGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCT---GCGGGAAGAAGAGCTAAG--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GESGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDADSLNVVYNLADFINKIAFGLVIWAAATSS-AGRRAK----------------------------------- [IV-Alpha8-18B2]_1112731217343 [IV-Alpha8-18B2] JCVI_ORF_1112731217343_GS117a_Coastal_sample_2m jcvi|1112731217343| 1112731217343 JCVI ORF 1112731217343 1112731217343 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 09-sept-05 Coastal_sample/2m_depth/S_35.5_psu/GS117a/St._Anne_Island/Seychelles/Indian_Ocean Indian Ocean marine -4.613611 55.50861 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TTGATAGGTTTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGAAACGTCGCAGCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCTTTCATACACTACATGTACATGAGAGAAGTATGGGTATCTACTGGAGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCGATCGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGCTTATCGGTGGTTACTTAGGTGAAGCGGGATATATTAATGCTACACTAGGTTTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAGTCTGGAAGAGCTGCAGCGAAGAGTGGTAACAAAGCTCTTGTAACAGCATTCGGAGCAATGAGAATGATTGTTACAGTAGGTTGGGCGATTTACCCATTAGGTTATGTATTTGGTTACTTAACTGGTGGTGTAGATGCTAATTCACTTAACGTTGTTTATAACTTAGCTGACTTCATTAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCGGCAACTAGTTCTGCAGGAAAAAGAGCTAAG LIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVAAGWRTSVIVAGLVTGIAFIHYMYMREVWVSTGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGESGRAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAATSSAGKRAK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAGGTTTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGAAACGTCGCAGCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCTTTCATACACTACATGTACATGAGAGAAGTATGGGTA------------------------------TCTACT---------------------GGAGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCG---------ATC---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGCTTATCGGTGGTTACTTAGGTGAA---------GCG------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAGTCTGGAAGAGCTGCAGCGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACA---GCA---TTC---GGA---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCGATTTACCCATTAGGTTATGTATTTGGTTACTTA---------------------------------------ACTGGTGGTGTAGATGCTAATTCACTTAACGTTGTTTATAACTTAGCTGACTTCATTAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCGGCAACTAGTTCT---GCAGGAAAAAGAGCTAAG--------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------LIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVAA-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------ST-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GESGRAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAATSS-AGKRAK----------------------------------- [IV-Alpha8-18B2]_1105140024838 [IV-Alpha8-18B2] JCVI_ORF_1105140024838_GS000c_Open_Ocean_5m jcvi|1105140024838| 1105140024838 JCVI ORF 1105140024838 1105140024838 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.22_0.8 other #na 25-FEB-2003 Open_Ocean/5m_depth/S_36.7_psu/GS000c/Sargasso_Stations_3/Sargasso_Sea Sargasso Sea marine 32.174835 -64.01017 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATAAAACTAACGAAGAGGGAGTTTTTTATGAAAAAACTTAAATTGTTTGCTCTAGCAGCTATGACCTTAATAGGTTTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAACGTCGCAGCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTAGTACTGGAGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATCGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCACTAGTAATGCTTATCGGTGGTTACTTAGGTGAAGCAGGATATATTAATGCTACACTTGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATTGTTACAGTAGGTTGGGCGATTTACCCATTAGGTTATGTATTTGGTTACCTAACTGGTGGAGTAGATGCTAATTCACTTAACGTTGTTTATAACTTAGCTGACTTCATTAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCGGCAACTAGTTCTGCAGGAAAAAGAGCTAAG IKLTKREFFMKKLKLFALAAMTLIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVAAGWRTSVIVAGLVTGIAFIHYMYMREVWVSTGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAATSSAGKRAK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAAACTAACGAAGAGGGAGTTTTTTATGAAAAAACTTAAATTGTTTGCTCTAGCAGCTATGACCTTAATAGGTTTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAACGTCGCAGCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------AGTACT---------------------GGAGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCACTAGTAATGCTTATCGGTGGTTACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCGATTTACCCATTAGGTTATGTATTTGGTTACCTA---------------------------------------ACTGGTGGAGTAGATGCTAATTCACTTAACGTTGTTTATAACTTAGCTGACTTCATTAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCGGCAACTAGTTCT---GCAGGAAAAAGAGCTAAG--------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------IKLTKREFFMKKLKLFALAAMTLIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVAA-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------ST-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAATSS-AGKRAK----------------------------------- [IV-Alpha8-18B2]_1105112726798 [IV-Alpha8-18B2] JCVI_ORF_1105112726798_GS021_Coastal_2m jcvi|1105112726798| 1105112726798 JCVI ORF 1105112726798 1105112726798 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 19-janv-04 Coastal/2m_depth/S_30.7_psu/GS021/Gulf_of_Panama/Eastern_Tropical_Pacific Pacific Ocean marine 8.129167 -79.69111 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCTCTAGCAGCTATGACCTTAATAGGTTTCTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTGGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGAAACGTCGCAGCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTATCTACTGGAGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATCGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGCTTATCGGTGGTTACTTAGGTGAAGCAGGATATATTAATGCTACACTAGGTTTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATTGTTACAGTAGGTTGGGCGATTTACCCATTAGGTTACGTATTTGGTTACTTAACTGGTGGTGTAGATGCTAATTCACTTAACGTTGTTTATAACTTAGCTGACTTTATTAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCGGCAACTAGTTCTGCAGGAAAAAGAGCTAAG MKKLKLFALAAMTLIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVAAGWRTSVIVAGLVTGIAFIHYMYMREVWVSTGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAATSSAGKRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCTCTAGCAGCTATGACCTTAATAGGTTTCTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTGGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGAAACGTCGCAGCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTA------------------------------TCTACT---------------------GGAGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGCTTATCGGTGGTTACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCGATTTACCCATTAGGTTACGTATTTGGTTACTTA---------------------------------------ACTGGTGGTGTAGATGCTAATTCACTTAACGTTGTTTATAACTTAGCTGACTTTATTAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCGGCAACTAGTTCT---GCAGGAAAAAGAGCTAAG--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALAAMTLIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVAA-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------ST-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAATSS-AGKRAK----------------------------------- [IV-Alpha8-18B2]_EU079205 [IV-Alpha8-18B2] NASB_66_env_samples_EU079205 gi|156106570|gb|EU079205| Uncultured organism clone NASB 66 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 66 putative proteorhodopsin gene, partial cds EU079205 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGGTACATAGATTGGTTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTGGCAGCTATCGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGCTTATCGGTGGTTACTTAGGTGAAGCAGGATATATTAATGCTACACTAGGTTTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATTGTTACAGTAGGCTGGGCCATATAT RYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTACATAGATTGG------------------------TTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTGGCAGCT---------ATC---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGCTTATCGGTGGTTACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGCTGG---------GCCATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_DQ903134 [IV-Alpha8-18B2] clone_A1S0046_DQ903134 gi|116293997|gb|DQ903134| Uncultured bacterium clone A1S0046 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A1S0046 putative proteorhodopsin gene, partial cds. DQ903134 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na South China Sea surface water (SCS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na ATGGTTGCCGCTACTGCTTTCTTCTTCATGGAAGCAGGAAACGTCGCAGCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTATATGAGAGAAGTATGGGTATCTACTGGAGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATCGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGCTTATCGGTGGTTACTTAGGTGAAGCAGGATATATTAATGCTACACTAGGTTTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATTGTTACAGTAGGCTGGGCTATTTATCCA MVAATAFFFMEAGNVAAGWRTSVIVAGLVTGIAFIHYMYMREVWVSTGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGCTTTCTTCTTCATGGAAGCAGGAAACGTCGCAGCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTATATGAGAGAAGTATGGGTA------------------------------TCTACT---------------------GGAGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGCTTATCGGTGGTTACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGCTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMEAGNVAA-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------ST-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_DQ422524 [IV-Alpha8-18B2] clone_med-tb04-50m-g4_DQ422524 gi|90024568|gb|DQ422524| Uncultured bacterium clone med-tb04-50m-g4 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-g4 putative proteorhodopsin gene, partial cds. DQ422524 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTGCCTTTGCAGATGGTAGAATTCTATTTAATTCTAGCAGCTATCGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGCTTATCGGTGGTTACTTAGGTGAAGCAGGATATATTAATGCTACACTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAGGCTGCAGCGAAGAGTGGTAACAAAGCTCTTGTAACCGCATTCGGAGCAATGAGAATGATTGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTGCCTTTGCAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGCTTATCGGTGGTTACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAGGCTGCAGCGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACC---GCA---TTC---GGA---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_1105092730808 [IV-Alpha8-18B2] JCVI_ORF_1105092730808_GS016_Coastal_Sea_2m jcvi|1105092730808| 1105092730808 JCVI ORF 1105092730808 1105092730808 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 08-janv-04 Coastal_Sea/2m_depth/S_35.8_psu/GS016/Gulf_of_Mexico/Caribbean_Sea Caribbean Sea marine 24.174723 -84.344444 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAACTGTTTGCTTTAGCAGCTATGGCTCTGATTGGATTTTCAGGTATAGCTATTGCGGCAGACGCAACGATGTTGATGCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCGGGCAACGTCGCATCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATAGCATTCATACACTACATGTACATGAGAGAAGTATGGGTATCTACTGGAGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATTACTGTGCCTTTACAGATGGTAGAATTTTACTTAATTCTAGCAGCTATCGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGCTTATCGGTGGATACTTAGGTGAAGCAGGATATATTAATGCTACACTAGGTTTCATTATTGGAATGGCAGGTTGGATATACATTCTATATGAAATATTCTCTGGTGAAGCTGGTAAAGCTGCAGCTAAAAGTGGTAACAAAGCTTTAGTAACTGCTTTTGGTGCTATGAGAATGATCGTTACAGTAGGTTGGGCAATTTACCCATTAGGTTATGTATTTGGTTACTTAACTGGTGGTGTAGACGCTAACTCACTTAACGTCGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATTTGGGCTGCTGCAACTAGTTCAAGCGGAAAAAGAGCTAAG MKKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVSTGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAATSSSGKRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAACTGTTTGCTTTAGCAGCTATGGCTCTGATTGGATTTTCAGGTATAGCTATTGCGGCAGACGCAACGATGTTGATGCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCGGGCAACGTCGCATCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATAGCATTCATACACTACATGTACATGAGAGAAGTATGGGTA------------------------------TCTACT---------------------GGAGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATTACTGTGCCTTTACAGATGGTAGAATTTTACTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGCTTATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATTATTGGAATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCT---GGTGAAGCTGGTAAAGCTGCAGCTAAA------AGT---GGTAACAAAGCTTTA---GTA---ACT---GCT---TTT---GGT---GCTATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCATTAGGTTATGTATTTGGTTACTTA---------------------------------------ACTGGTGGTGTAGACGCTAACTCACTTAACGTCGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATTTGGGCTGCTGCAACTAGTTCA---AGCGGAAAAAGAGCTAAG--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------ST-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAATSS-SGKRAK----------------------------------- [IV-Alpha8-18B2]_1105092610358 [IV-Alpha8-18B2] JCVI_ORF_1105092610358_GS030_Warm_Seep_19m jcvi|1105092610358| 1105092610358 JCVI ORF 1105092610358 1105092610358 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 09-FEB-2004 Warm_Seep/19m_depth/S_n.a/GS030/Warm_seep/Roca_Redonda/Galapagos_Islands Red Sea marine 0.27222222 -91.63333 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCTTTAGCAGCTATGGCTCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTCGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAATGTCGCATCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATACATTAATGCTACACTTGGTTTCATCATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGTAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGTTGGGCAATTTACCCATTAGGTTATGTATTTGGTTACTTAACTGGTGGTGTAGACGCTAACTCACTAAACGTTGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCTGCGGGAAGAAGAGCTAAG MKKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAATSSAGRRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCTTTAGCAGCTATGGCTCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTCGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAATGTCGCATCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGTAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCATTAGGTTATGTATTTGGTTACTTA---------------------------------------ACTGGTGGTGTAGACGCTAACTCACTAAACGTTGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCT---GCGGGAAGAAGAGCTAAG--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAATSS-AGRRAK----------------------------------- [IV-Alpha8-18B2]_EU224300 [IV-Alpha8-18B2] clone_1812202_EU224300 gi|164698772|gb|EU224300| Uncultured bacterium clone 1812202 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 1812202 putative proteorhodopsin gene, partial cds. EU224300 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2008 #na surface water sample Indian Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGGTTGCCGCTACTGTATTCTTCTTCATGGAAGCAGGCAACGTCGCATCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATCACAGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATTAATGCTACACTTGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCGAAAAGTGGAAACAAAGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCCATCTATCCA MVAATVFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTATTCTTCTTCATGGAAGCAGGCAACGTCGCATCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACAGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCGAAA------AGT---GGAAACAAAGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EU224285 [IV-Alpha8-18B2] clone_1812217_EU224285 gi|164698742|gb|EU224285| Uncultured bacterium clone 1812217 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 1812217 putative proteorhodopsin gene, partial cds. EU224285 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2008 #na surface water sample Indian Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGGTTGCCGCTACTGTATTCTTCTTCATGGAAGCAGGCAACGTCGCATCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATCACAGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATTAATGCTACACTTGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCGAAAAGTGGAAACAAAGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCCATCTATCCA MVAATVFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTATTCTTCTTCATGGAAGCAGGCAACGTCGCATCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACAGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCGAAA------AGT---GGAAACAAAGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EU224297 [IV-Alpha8-18B2] clone_1812230_EU224297 gi|164698766|gb|EU224297| Uncultured bacterium clone 1812230 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 1812230 putative proteorhodopsin gene, partial cds. EU224297 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2008 #na surface water sample Indian Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGGTTGCCGCTACTGTATTCTTCTTCATGGAAGCAGGCAACGTCGCATCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATCACAGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATTAATGCTACACTTGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCGAAAAGTGGAAACAAAGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCCATCTATCCA MVAATVFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTATTCTTCTTCATGGAAGCAGGCAACGTCGCATCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACAGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCGAAA------AGT---GGAAACAAAGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EU224294 [IV-Alpha8-18B2] clone_1812227_EU224294 gi|164698760|gb|EU224294| Uncultured bacterium clone 1812227 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 1812227 putative proteorhodopsin gene, partial cds. EU224294 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2008 #na surface water sample Indian Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGGTTGCCGCTACTGTATTCTTCTTCATGGAAGCAGGCAACGTCGCATCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATCACAGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATTAATGCTACACTTGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCGAAAAGTGGAAACAAAGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCCATCTATCCA MVAATVFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTATTCTTCTTCATGGAAGCAGGCAACGTCGCATCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACAGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCGAAA------AGT---GGAAACAAAGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EU915851 [IV-Alpha8-18B2] APF1109_env_samples_EU915851 gi|229358584|gb|EU915851| Uncultured microorganism clone APF1109 putative proteorhodopsin gene, partial cds Uncultured microorganism clone APF1109 putative proteorhodopsin gene, partial cds EU915851 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample_at_200_m_depth Atlantic Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTTGCCGCTACTGCGTTCTTCTTCATGGAAGCAGGCAACGTCGCATCTGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATCACAGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATTAATGCTACACTTGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCGAAAAGTGGAAACAAAGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCAATTTAC MVAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGCGTTCTTCTTCATGGAAGCAGGCAACGTCGCATCT---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACAGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCGAAA------AGT---GGAAACAAAGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCAATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EF088537 [IV-Alpha8-18B2] clone_APF1109_EF088537 gi|126843298|gb|EF088537| Uncultured bacterium clone APF1109 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone APF1109 putative proteorhodopsin gene, partial cds. EF088537 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na 200m water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTTGCCGCTACTGCGTTCTTCTTCATGGAAGCAGGCAACGTCGCATCTGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATCACAGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATTAATGCTACACTTGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCGAAAAGTGGAAACAAAGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCAATTTACCCA MVAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGCGTTCTTCTTCATGGAAGCAGGCAACGTCGCATCT---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACAGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCGAAA------AGT---GGAAACAAAGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_1105088518660 [IV-Alpha8-18B2] JCVI_ORF_1105088518660_GS015_Coastal_2m jcvi|1105088518660| 1105088518660 JCVI ORF 1105088518660 1105088518660 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 08-janv-04 Coastal/2m_depth/S_36_psu/GS015/Off_Key_West/FL/Caribbean_Sea Caribbean Sea marine 24.488333 -83.07 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATAAAAACTAACGAAGAGGGAGTTTTTATGAAAAAACTTAAATTGTTTGCTTTAGCAGCTATGACCTTGATCGGTTTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGAAACGTCGCAGCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCGTTCATACACTACATGTACATGAGAGAAGTGTGGGTTGCTACTGGAGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCGATCGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCACTGGTAATGCTTATCGGTGGTTACTTAGGTGAAGCAGGATATATTAATGCTACACTTGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAGGCTGGTAAAGCTGCAGCGAAAAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATTGTTACAGTAGGTTGGGCGATTTACCCATTAGGTTATGTATTTGGTTACTTAACTGGTGGTGTAGACGCTAATTCACTTAACGTTGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCGGCAACTAGTTCTGCAGGAAAAAGAGCTAAG IKTNEEGVFMKKLKLFALAAMTLIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVAAGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAATSSAGKRAK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAAAACTAACGAAGAGGGAGTTTTTATGAAAAAACTTAAATTGTTTGCTTTAGCAGCTATGACCTTGATCGGTTTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGAAACGTCGCAGCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCGTTCATACACTACATGTACATGAGAGAAGTGTGGGTT------------------------------GCTACT---------------------GGAGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCG---------ATC---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCACTGGTAATGCTTATCGGTGGTTACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAGGCTGGTAAAGCTGCAGCGAAA------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCGATTTACCCATTAGGTTATGTATTTGGTTACTTA---------------------------------------ACTGGTGGTGTAGACGCTAATTCACTTAACGTTGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCGGCAACTAGTTCT---GCAGGAAAAAGAGCTAAG--------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------IKTNEEGVFMKKLKLFALAAMTLIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVAA-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAATSS-AGKRAK----------------------------------- [IV-Alpha8-18B2]_EF088561 [IV-Alpha8-18B2] clone_AT37005_EF088561 gi|126843361|gb|EF088561| Uncultured bacterium clone AT37005 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT37005 putative proteorhodopsin gene, partial cds. EF088561 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na surface water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTCGCCGCTACTGTTTTCTTCTTCTTAGAAACAGGCAACGTTGCAGCAGGCTGGAGAACTTCAGTTATTGTTGCAGGTCTAGTAACCGGTATCGCTTTCATTCACTACATGTACATGAGAGAAGTATGGGTAAGCACAGGTGATTCACCTACTGTTTACAGATACATTGACTGGTTAATCACTGTACCTTTACAGATGGTAGAATTTTACTTAATTCTAGCAGCTATTGGTAAAGCAAAATCTGGAATGTTCTGGAGATTGTTAATTGGTTCAATTGTGATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACGCTTGGCTTTATAGTCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGTAACAAGGCTCTTGTAACTGCGTTTGGTGCGATGAGAATGATCGTAACAGTAGGCTGGGCCATATACCCA MVAATVFFFLETGNVAAGWRTSVIVAGLVTGIAFIHYMYMREVWVSTGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKAKSGMFWRLLIGSIVMLVGGYLGEAGYINATLGFIVGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCCGCTACTGTTTTCTTCTTCTTAGAAACAGGCAACGTTGCAGCA---GGCTGGAGAACTTCAGTTATTGTTGCAGGTCTAGTAACCGGTATCGCTTTCATTCACTACATGTACATGAGAGAAGTATGGGTA------------------------------AGCACA---------------------GGTGATTCACCTACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTACCTTTACAGATGGTAGAATTTTACTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAAATCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCAATTGTGATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACGCTTGGC---TTTATAGTCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGTAACAAGGCTCTT---GTA---ACT---GCG---TTT---GGT---GCGATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGCTGG---------GCCATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLETGNVAA-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------ST-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKAKS-GM------------FWR-LLIGSIVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EU224303 [IV-Alpha8-18B2] clone_1812205_EU224303 gi|164698778|gb|EU224303| Uncultured bacterium clone 1812205 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 1812205 putative proteorhodopsin gene, partial cds. EU224303 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2008 #na surface water sample Indian Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGCTCGCCGCTACTGTTTTCTTCTTAGAAACAGGCAACGTTGCAGCAGGCTGGAGAACTTCAGTTATTGTTGCAGGTCTAGTAACCGGTATCGCTTTCATTCACTACATGTACATGAGAGAAGTATGGGTAAGCACAGGTGATTCACCTACTGTTTACAGATACATTGACTGGTTAATCACTGTACCTTTACAGATGGTAGAATTTTACTTAATTCTAGCAGCTATTGGTAAAGCAAAATCTGGAATGTTCTGGAGATTGTTAATTGGTTCAATTGTGATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACGCTTGGCTTTATAGTCGGTATGGCTGGCTGGGTATACATTCTCTATGAAGTATTCTCTGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGTAACAAGGCTCTTGTAACTGCGTTTGGTGCGATGAGAATGATCGTAACAGTAGGGTGGGCCATCTATCCA MLAATVFFLETGNVAAGWRTSVIVAGLVTGIAFIHYMYMREVWVSTGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKAKSGMFWRLLIGSIVMLVGGYLGEAGYINATLGFIVGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTCGCCGCTACTGTT---TTCTTCTTAGAAACAGGCAACGTTGCAGCA---GGCTGGAGAACTTCAGTTATTGTTGCAGGTCTAGTAACCGGTATCGCTTTCATTCACTACATGTACATGAGAGAAGTATGGGTA------------------------------AGCACA---------------------GGTGATTCACCTACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTACCTTTACAGATGGTAGAATTTTACTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAAATCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCAATTGTGATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACGCTTGGC---TTTATAGTCGGTATGGCTGGCTGGGTATACATTCTCTATGAAGTA---------------TTC------TCT---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGTAACAAGGCTCTT---GTA---ACT---GCG---TTT---GGT---GCGATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATV-FFLETGNVAA-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------ST-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKAKS-GM------------FWR-LLIGSIVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EU224309 [IV-Alpha8-18B2] clone_1812211_EU224309 gi|164698790|gb|EU224309| Uncultured bacterium clone 1812211 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 1812211 putative proteorhodopsin gene, partial cds. EU224309 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2008 #na surface water sample Indian Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGCTCGCCGCTACTGTTTTCTTCTTAGAAACAGGCAACGTTGCAGCAGGCTGGAGAACTTCAGTTATTGTTGCAGGTCTAGTAACCGGTATCGCTTTCATTCACTACATGTACATGAGAGAAGTATGGGTAAGCACAGGTGATTCACCTACTGTTTACAGATACATTGACTGGTTAATCACTGTACCTTTACAGATGGTAGAATTTTACTTAATTCTAGCAGCTATTGGTAAAGCAAAATCTGGAATGTTCTGGAGATTGTTAATTGGTTCAATTGTGATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACGCTTGGCTTTATAGTCGGTATGGCTGGCTGGGTATACATTCTCTATGAAGTATTCTCTGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGTAACAAGGCTCTTGTAACTGCGTTTGGTGCGATGAGAATGATCGTAACAGTAGGGTGGGCCATCTATCCA MLAATVFFLETGNVAAGWRTSVIVAGLVTGIAFIHYMYMREVWVSTGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKAKSGMFWRLLIGSIVMLVGGYLGEAGYINATLGFIVGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTCGCCGCTACTGTT---TTCTTCTTAGAAACAGGCAACGTTGCAGCA---GGCTGGAGAACTTCAGTTATTGTTGCAGGTCTAGTAACCGGTATCGCTTTCATTCACTACATGTACATGAGAGAAGTATGGGTA------------------------------AGCACA---------------------GGTGATTCACCTACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTACCTTTACAGATGGTAGAATTTTACTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAAATCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCAATTGTGATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACGCTTGGC---TTTATAGTCGGTATGGCTGGCTGGGTATACATTCTCTATGAAGTA---------------TTC------TCT---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGTAACAAGGCTCTT---GTA---ACT---GCG---TTT---GGT---GCGATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATV-FFLETGNVAA-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------ST-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKAKS-GM------------FWR-LLIGSIVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EU079242 [IV-Alpha8-18B2] clone_B_Mtd1_018_EU079242 gi|156106643|gb|EU079242| Uncultured organism clone B Mtd1 018 putative proteorhodopsin gene, partial cds. Uncultured organism clone B Mtd1 018 putative proteorhodopsin gene, partial cds. EU079242 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; na light-energy conversion (ion transport) unknown [unclassified sequences/environmental samples] taxon:155900 genomic DNA other 27-FEB-2008 #na Sargasso Sea surface water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99-109 (2008) 18211270 #na GGATACTTAGGAGAAGCAGGATATATTAATGCTACACTTGGTTTCATTATTGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTATTGGTTGGGC GYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTIGW ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGATACTTAGGAGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATTATTGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTATT---------------------------------------------------------------GGTTGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTI---------------------GW--------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EU915878 [IV-Alpha8-18B2] US080207_env_samples_EU915878 gi|229358638|gb|EU915878| Uncultured microorganism clone US080207 putative proteorhodopsin gene, partial cds Uncultured microorganism clone US080207 putative proteorhodopsin gene, partial cds EU915878 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_surface_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTAGCCGCTACTGTTTTCTTCTTCATGGAAGCAGGCAACGTCGCATCAGGCTGGAGAACATCAGTAATTGTTGCCGGTCTAGTAACTGGAATAGCTTTCATTCACTACGTGTACATGAGAGAAGTATGGGTAAGCACAGGTGACTCACCTACTGTTTACAGATACATTGACTGGTTAATCACTGTACCATTACAGATGGTAGAATTTTACTTAATTCTAGCAGCTATTGGTAAAGCAAACTCAGGTATGTTCTGGAGATTATTACTTGGTTCAGTTGTTATGCTAGTAGGTGGATACTTGGGTGAAGCTGGATATATTAATGCTACACTTGGTTTCATTATTGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTAGGTTGGGCCATTTAT MVAATVFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYVYMREVWVSTGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTTTTCTTCTTCATGGAAGCAGGCAACGTCGCATCA---GGCTGGAGAACATCAGTAATTGTTGCCGGTCTAGTAACTGGAATAGCTTTCATTCACTACGTGTACATGAGAGAAGTATGGGTA------------------------------AGCACA---------------------GGTGACTCACCTACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTACCATTACAGATGGTAGAATTTTACTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCA---GGTATG------------------------------------TTCTGGAGA---TTATTACTTGGTTCAGTTGTTATGCTAGTAGGTGGATACTTGGGTGAA---------GCT------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATTATTGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCCATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYVYMREVWV----------ST-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EU915879 [IV-Alpha8-18B2] US080208_env_samples_EU915879 gi|229358640|gb|EU915879| Uncultured microorganism clone US080208 putative proteorhodopsin gene, partial cds Uncultured microorganism clone US080208 putative proteorhodopsin gene, partial cds EU915879 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_surface_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTAGCCGCTACTGTGTTCTTCTTCATGGAAGCAGGCAACGTCGCATCAGGCTGGAGAACATCAGTAATTGTTGCCGGTCTAGTAACTGGAATAGCTTTCATTCACTACATGTACATGAGAGAAGTATGGGTAAGCACAGGTGACTCACCTACTGTTTACAGATACATTGACTGGTTAATCACTGTACCTTTACAGATGGTAGAATTTTACCTAATTCTAGCAGCTATTGGTAAAGCAAACTCAGGTATGTTCTGGAGATTGTTACTTGGTTCAGTTGTTATGCTAGTAGGTGGATACTTAGGTGAAGCTGGATATATTAATGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTAGGTTGGGCAATCTAC MVAATVFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVSTGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTGTTCTTCTTCATGGAAGCAGGCAACGTCGCATCA---GGCTGGAGAACATCAGTAATTGTTGCCGGTCTAGTAACTGGAATAGCTTTCATTCACTACATGTACATGAGAGAAGTATGGGTA------------------------------AGCACA---------------------GGTGACTCACCTACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTACCTTTACAGATGGTAGAATTTTACCTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCA---GGTATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCAGTTGTTATGCTAGTAGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------ST-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_1105111567484 [IV-Alpha8-18B2] JCVI_ORF_1105111567484_GS032_Mangrove_1m jcvi|1105111567484| 1105111567484 JCVI ORF 1105111567484 1105111567484 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 11-FEB-2004 Mangrove/1m_depth/S_n.a/GS032/Mangrove_on_Isabella_Island/Galapagos_Islands Pacific Ocean marine -0.5938889 -91.06944 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCTTTAGCAGCTATGGCACTGATTGGATTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTAATGCAAGATGACTTCGTCGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAATGTCGCATCAGGCTGGAGAACATCAGTTATTGTTGCCGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTGAGCACAGGTGACTCGCCAACAGTTTACAGATACATCGACTGGTTAATTACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTGGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGTTATATCAATGCAACACTTGGATTTATCATTGGAATGGCAGGTTGGATATACATTCTATATGAAGTATTCTCGGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGAAACAAGTCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTAGGTTGGGCAATTTACCCATTAGGTTACATTTTTGGTTACCTAACAGGTGGAGTAGACGCTGACTCACTTAACGTCGTTTACAACCTAGCTGACTTTATTAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCAAGCGGAAGAAGAGCTAAG MKKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVSTGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKAAAKSGNKSLVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDADSLNVVYNLADFINKIAFGLVIWAAATSSSGRRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCTTTAGCAGCTATGGCACTGATTGGATTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTAATGCAAGATGACTTCGTCGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAATGTCGCATCA---GGCTGGAGAACATCAGTTATTGTTGCCGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTG------------------------------AGCACA---------------------GGTGACTCGCCAACAGTTTACAGATACATCGACTGG------------------------TTAATTACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTGGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------AATGCA------------------ACACTTGGA---TTTATCATTGGAATGGCAGGTTGGATATACATTCTATATGAAGTA---------------TTC------TCG---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAGTCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCATTAGGTTACATTTTTGGTTACCTA---------------------------------------ACAGGTGGAGTAGACGCTGACTCACTTAACGTCGTTTACAACCTAGCTGACTTTATTAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCA---AGCGGAAGAAGAGCTAAG--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------ST-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDADSLNVVYNLADFINKIAFGLVIWAAATSS-SGRRAK----------------------------------- [IV-Alpha8-18B2]_1105108629662 [IV-Alpha8-18B2] JCVI_ORF_1105108629662_GS030_Warm_Seep_19m jcvi|1105108629662| 1105108629662 JCVI ORF 1105108629662 1105108629662 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 09-FEB-2004 Warm_Seep/19m_depth/S_n.a/GS030/Warm_seep/Roca_Redonda/Galapagos_Islands Red Sea marine 0.27222222 -91.63333 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCTTTAGCAGCTATGGCTCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTCGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCGGGCAACGTCGCATCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTAGTACTGGTGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGCTTATCGGTGGATACTTAGGTGAAGCAGGTTATATTAATGCTACACTAGGTTTCATAATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCACAGAAGAGTGGTAACAAGTCTCTTGTAACTGCATTCGGTGCAATGAGAATGATTGTTACAGTAGGTTGGGCAATTTACCCATTAGGTTATGTATTTGGTTACTTAACTGGTGGTGTAGACGCTGACTCACTTAACGTCGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCAAGCGGAAGAAGAGCTAAG MKKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVSTGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAQKSGNKSLVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDADSLNVVYNLADFINKIAFGLVIWAAATSSSGRRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCTTTAGCAGCTATGGCTCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTCGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCGGGCAACGTCGCATCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------AGTACT---------------------GGTGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGCTTATCGGTGGATACTTAGGTGAA---------GCA------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATAATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCACAGAAG------AGT---GGTAACAAGTCTCTT---GTA---ACT---GCA---TTC---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCATTAGGTTATGTATTTGGTTACTTA---------------------------------------ACTGGTGGTGTAGACGCTGACTCACTTAACGTCGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCA---AGCGGAAGAAGAGCTAAG--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------ST-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAQK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDADSLNVVYNLADFINKIAFGLVIWAAATSS-SGRRAK----------------------------------- [IV-Alpha8-18B2]_1105139785824 [IV-Alpha8-18B2] JCVI_ORF_1105139785824_GS034_Coastal_3m jcvi|1105139785824| 1105139785824 JCVI ORF 1105139785824 1105139785824 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 19-FEB-2004 Coastal/3m_depth/S_n.a/GS034/North_Seamore_Island/Galapagos_Islands North Sea marine -0.38305557 -90.279724 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCTTTAGCAGCTATGGCTCTGATCGGATTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTCGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAATGTCGCATCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATCACAGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGCAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATTGGTGGATACTTAGGTGAAGCAGGATATATCAATGCTACACTCGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCACAGAAGAGTGGTAATAAATCTCTTGTAACTGCATTCGGAGCAATGAGAATGATCGTTACAGTAGGTTGGGCAATTTACCCATTAGGTTATGTATTTGGTTACTTAACTGGTGGTGTAGACGCTGACTCACTTAACGTCGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCAAGCGGAAGAAGAGCTAAG MKKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAQKSGNKSLVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDADSLNVVYNLADFINKIAFGLVIWAAATSSSGRRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCTTTAGCAGCTATGGCTCTGATCGGATTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTCGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAATGTCGCATCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACAGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGCAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATTGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTCGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCACAGAAG------AGT---GGTAATAAATCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCATTAGGTTATGTATTTGGTTACTTA---------------------------------------ACTGGTGGTGTAGACGCTGACTCACTTAACGTCGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCA---AGCGGAAGAAGAGCTAAG--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAQK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDADSLNVVYNLADFINKIAFGLVIWAAATSS-SGRRAK----------------------------------- [IV-Alpha8-18B2]_1105117849410 [IV-Alpha8-18B2] JCVI_ORF_1105117849410_GS028_Coastal_2m jcvi|1105117849410| 1105117849410 JCVI ORF 1105117849410 1105117849410 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 04-FEB-2004 Coastal/2m_depth/S_n.a/GS028/Coastal_Floreana/Galapagos_Islands Pacific Ocean marine -1.2169445 -90.319725 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAACTGTTTGCTTTAGCAGCTATGGCCTTGATAGGTTTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGAGCCAAGATGATTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGGATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCGGGCAATGTCGCATCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTTGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCAATTAATAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTGATGCTAATCGGTGGATACTTAGGTGAAGCAGGTTATATTAATGCTACACTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCATCGAAGAGTGGTAACAAATCTCTTGTAACTGCATTTGGTGCAATGAGAATGATCGTTACAGTAGGTTGGGCAATTTACCCACTAGGTTATGTATTTGGTTACTTAACTGGTGGTGTAGACGCTGACTCACTAAACGTCGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAGCTCCAAGCCTT MKKLKLFALAAMALIGFSGIAIAADATMLSQDDFVGISFWVISMGMLAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAASKSGNKSLVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDADSLNVVYNLADFINKIAFGLVIWAAAAPSL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAACTGTTTGCTTTAGCAGCTATGGCCTTGATAGGTTTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGAGCCAAGATGATTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGGATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCGGGCAATGTCGCATCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTTGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCA---------ATT---AATAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTGATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCATCGAAG------AGT---GGTAACAAATCTCTT---GTA---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCACTAGGTTATGTATTTGGTTACTTA---------------------------------------ACTGGTGGTGTAGACGCTGACTCACTAAACGTCGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAGCTCCAAGC---CTT------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------MKKLKLFALAAMALIGFSGIAIAADATMLSQDDFVGISFWVISMGMLAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAASK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDADSLNVVYNLADFINKIAFGLVIWAAAAPS-L---------------------------------------- [IV-Alpha8-18B2]_1105110127376 [IV-Alpha8-18B2] JCVI_ORF_1105110127376_GS015_Coastal_2m jcvi|1105110127376| 1105110127376 JCVI ORF 1105110127376 1105110127376 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 08-janv-04 Coastal/2m_depth/S_36_psu/GS015/Off_Key_West/FL/Caribbean_Sea Caribbean Sea marine 24.488333 -83.07 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAACTGTTTGCTTTAGCAGCTATGGCCTTGATAGGTTTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGAGCCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGGATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCGGGCAACGTCGCATCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTAACAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTGATGCTAATCGGTGGATACTTAGGTGAAGCGGGATATATTAATGCTACACTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCATCGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATCGTTACAGTAGGTTGGGCAATTTACCCATTAGGTTATGTATTTGGTTACTTAACTGGTGGAGTAGACGCTGACTCACTTAACGTCGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCAAGCGGAAAAAGAGCTAGG MKKLKLFALAAMALIGFSGIAIAADATMLSQDDFVGISFWVISMGMLAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDADSLNVVYNLADFINKIAFGLVIWAAATSSSGKRAR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAACTGTTTGCTTTAGCAGCTATGGCCTTGATAGGTTTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGAGCCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGGATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCGGGCAACGTCGCATCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---AACAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTGATGCTAATCGGTGGATACTTAGGTGAA---------GCG------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCATCGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCATTAGGTTATGTATTTGGTTACTTA---------------------------------------ACTGGTGGAGTAGACGCTGACTCACTTAACGTCGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCA---AGCGGAAAAAGAGCTAGG--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALAAMALIGFSGIAIAADATMLSQDDFVGISFWVISMGMLAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDADSLNVVYNLADFINKIAFGLVIWAAATSS-SGKRAR----------------------------------- [IV-Alpha8-18B2]_1112688917985 [IV-Alpha8-18B2] JCVI_ORF_1112688917985_GS114_Open_Ocean_2m jcvi|1112688917985| 1112688917985 JCVI ORF 1112688917985 1112688917985 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 15-AUG-2005 Open_Ocean/2m_depth/S_33.1_psu/GS114/500_Miles_west_of_the_Seychelles_in_the_Indian_Ocean/Indian_Ocean Indian Ocean marine -4.990278 64.97667 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAACTGTTTGCTTTAGCAGCTATGGCCTTGATAGGTTTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTGGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAATGTCGCATCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATACATTAATGCTACACTTGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCACAGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATCGTTACAGTAGGTTGGGCAATTTACCCATTAGGTTATGTATTTGGTTACTTAACTGGTGGTGTAGATGCTGACTCACTAAACGTTGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCAAGCGGAAGAAGAGCTAAG MKKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAQKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDADSLNVVYNLADFINKIAFGLVIWAAATSSSGRRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAACTGTTTGCTTTAGCAGCTATGGCCTTGATAGGTTTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTGGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAATGTCGCATCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCACAGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCATTAGGTTATGTATTTGGTTACTTA---------------------------------------ACTGGTGGTGTAGATGCTGACTCACTAAACGTTGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCA---AGCGGAAGAAGAGCTAAG--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAQK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDADSLNVVYNLADFINKIAFGLVIWAAATSS-SGRRAK----------------------------------- [IV-Alpha8-18B2]_1112700835911 [IV-Alpha8-18B2] JCVI_ORF_1112700835911_GS113_Open_Ocean_2m jcvi|1112700835911| 1112700835911 JCVI ORF 1112700835911 1112700835911 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 09-AUG-2005 Open_Ocean/2m_depth/S_33.3_psu/GS113/Indian_Ocean/Indian_Ocean Indian Ocean marine -7.0075 76.33139 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf CTGTTTGCTTTAGCAGCTATGGCCTTGATAGGTTTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCGGGCAACGTCGCATCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGCAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATACATTAATGCTACACTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCACAGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATCGTTACAGTAGGTTGGGCAATTTACCCATTAGGTTATGTATTTGGTTACTTAACTGGTGGTGTAGATGCTGACTCACTAAACGTAGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCAAGTGGAAGAAGAGCTAAG LFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAQKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDADSLNVVYNLADFINKIAFGLVIWAAATSSSGRRAK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTTGCTTTAGCAGCTATGGCCTTGATAGGTTTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCGGGCAACGTCGCATCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGCAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCACAGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCATTAGGTTATGTATTTGGTTACTTA---------------------------------------ACTGGTGGTGTAGATGCTGACTCACTAAACGTAGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCA---AGTGGAAGAAGAGCTAAG--------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------LFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAQK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDADSLNVVYNLADFINKIAFGLVIWAAATSS-SGRRAK----------------------------------- [IV-Alpha8-18B2]_1105149115960 [IV-Alpha8-18B2] JCVI_ORF_1105149115960_GS036_Coastal_3m jcvi|1105149115960| 1105149115960 JCVI ORF 1105149115960 1105149115960 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 02-mars-04 Coastal/3m_depth/S_34.6_psu/GS036/Cabo_Marshall/Isabella_Island/Galapagos_Islands Pacific Ocean marine -0.020833334 -91.19778 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ACGCTTGCAGACTTGATAGGTTTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAATGTCGCATCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTATCTACTGGAGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTGATGCTAATCGGTGGATACTTAGGTGAAGCAGGATACATTAATGCTACACTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCACAGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATCGTTACAGTAGGTTGGGCAATTTACCCATTAGGTTATGTATTTGGTTACTTAACTGGTGGTGTAGACGCTAACTCACTAAACGTAGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCAAGCGGAAGAAGAGCTAAG TLADLIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVSTGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAQKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAATSSSGRRAK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCTTGCAGACTTGATAGGTTTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAATGTCGCATCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTA------------------------------TCTACT---------------------GGAGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTGATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCACAGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCATTAGGTTATGTATTTGGTTACTTA---------------------------------------ACTGGTGGTGTAGACGCTAACTCACTAAACGTAGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCA---AGCGGAAGAAGAGCTAAG--------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------TLADLIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------ST-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAQK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAATSS-SGRRAK----------------------------------- [IV-Alpha8-18B2]_1105145004492 [IV-Alpha8-18B2] JCVI_ORF_1105145004492_GS034_Coastal_3m jcvi|1105145004492| 1105145004492 JCVI ORF 1105145004492 1105145004492 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 19-FEB-2004 Coastal/3m_depth/S_n.a/GS034/North_Seamore_Island/Galapagos_Islands North Sea marine -0.38305557 -90.279724 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATAAAAACTAACGAAGAGGGAGTTTTTATGAAAAAACTTAAATTGTTTGCTTTAGCAGCTATGGCTCTGATTGGATTTTCAAGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTCGGAATTTCATTCTGGGTTATCTCGATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAATGTCGCATCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCACCAACTGTTTACAGATACATTGACTGGTTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATACATTAATGCTACACTTGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCACAGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATCGTTACAGTAGGTTGGGCAATTTACCCATTAGGTTATGTATTTGGTTACTTAACTGGTGGTGTAGACGCTGACTCACTAAACGTTGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCAAGTGGAAGAAGAGCTAAG IKTNEEGVFMKKLKLFALAAMALIGFSSIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAQKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDADSLNVVYNLADFINKIAFGLVIWAAATSSSGRRAK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAAAACTAACGAAGAGGGAGTTTTTATGAAAAAACTTAAATTGTTTGCTTTAGCAGCTATGGCTCTGATTGGATTTTCAAGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTCGGAATTTCATTCTGGGTTATCTCGATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAATGTCGCATCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCACCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCACAGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCATTAGGTTATGTATTTGGTTACTTA---------------------------------------ACTGGTGGTGTAGACGCTGACTCACTAAACGTTGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCA---AGTGGAAGAAGAGCTAAG--------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------IKTNEEGVFMKKLKLFALAAMALIGFSSIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAQK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDADSLNVVYNLADFINKIAFGLVIWAAATSS-SGRRAK----------------------------------- [IV-Alpha8-18B2]_1105138696956 [IV-Alpha8-18B2] JCVI_ORF_1105138696956_GS021_Coastal_2m jcvi|1105138696956| 1105138696956 JCVI ORF 1105138696956 1105138696956 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 19-janv-04 Coastal/2m_depth/S_30.7_psu/GS021/Gulf_of_Panama/Eastern_Tropical_Pacific Pacific Ocean marine 8.129167 -79.69111 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf CTGTTTGCTTTAGCAGCTATGGCCTTGATAGGTTTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGAGCCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGGATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCGGGCAATGTCGCATCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATCGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCACCAACTGTTTACAGATACATTGACTGGTTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATACATTAATGCTACACTTGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCACAGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATCGTTACAGTAGGTTGGGCAATTTACCCATTAGGTTATGTATTTGGTTACCTAACTGGTGGTGTAGACGCTGACTCACTAAACGTTGTTTACAACTTAGCTGACTTCATTAACAAGATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCAAGCGGAAGAAGAGCTAAG LFALAAMALIGFSGIAIAADATMLSQDDFVGISFWVISMGMLAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAQKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDADSLNVVYNLADFINKIAFGLVIWAAATSSSGRRAK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTTGCTTTAGCAGCTATGGCCTTGATAGGTTTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGAGCCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGGATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCGGGCAATGTCGCATCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATCGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCACCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCACAGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCATTAGGTTATGTATTTGGTTACCTA---------------------------------------ACTGGTGGTGTAGACGCTGACTCACTAAACGTTGTTTACAACTTAGCTGACTTCATTAACAAGATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCA---AGCGGAAGAAGAGCTAAG--------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------LFALAAMALIGFSGIAIAADATMLSQDDFVGISFWVISMGMLAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAQK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDADSLNVVYNLADFINKIAFGLVIWAAATSS-SGRRAK----------------------------------- [IV-Alpha8-18B2]_1105108631812 [IV-Alpha8-18B2] JCVI_ORF_1105108631812_GS030_Warm_Seep_19m jcvi|1105108631812| 1105108631812 JCVI ORF 1105108631812 1105108631812 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 09-FEB-2004 Warm_Seep/19m_depth/S_n.a/GS030/Warm_seep/Roca_Redonda/Galapagos_Islands Red Sea marine 0.27222222 -91.63333 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCTTTAGCAGCTATGGCTCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTCGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAACGTCGCATCAGGCTGGAGAACGTCAGTTATTGTTGCCGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCGCCGACTGTTTACAGATACATCGACTGGTTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATAGGTGGATACCTAGGTGAAGCAGGATACATTAATGCTACACTTGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCACAGAAGAGTGGTAACAAAGCTCTTGTAACTGCGTTCGGAGCAATGAGAATGATCGTTACAGTAGGTTGGGCAATTTATCCATTAGGTTATGTATTTGGTTACTTAACTGGTGGCGTAGATGCTGACTCACTAAACGTCGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCAAGCGGAAGAAGAGCTAAG MKKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAQKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDADSLNVVYNLADFINKIAFGLVIWAAATSSSGRRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCTTTAGCAGCTATGGCTCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTCGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAACGTCGCATCA---GGCTGGAGAACGTCAGTTATTGTTGCCGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCGCCGACTGTTTACAGATACATCGACTGG------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATAGGTGGATACCTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCACAGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCG---TTC---GGA---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTATCCATTAGGTTATGTATTTGGTTACTTA---------------------------------------ACTGGTGGCGTAGATGCTGACTCACTAAACGTCGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCA---AGCGGAAGAAGAGCTAAG--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAQK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDADSLNVVYNLADFINKIAFGLVIWAAATSS-SGRRAK----------------------------------- [IV-Alpha8-18B2]_1105101165990 [IV-Alpha8-18B2] JCVI_ORF_1105101165990_GS014_Coastal_1m jcvi|1105101165990| 1105101165990 JCVI ORF 1105101165990 1105101165990 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 20-DEC-2003 Coastal/1m_depth/S_n.a/GS014/South_of_Charleston/SC/North_American_East_Coast Atlantic Ocean marine 32.506943 -79.263885 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAACTGTTTGCTTTAGCAGCTATGGCCTTGATAGGTTTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAATGTCGCATCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATTGGTGGATACTTAGGTGAAGCAGGATATATCAATGCTACACTTGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCATCAAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATTGTTACAGTAGGTTGGGCAATTTACCCATTAGGTTATGTATTTGGTTACCTAACTGGTGGTGTAGACGCTGACTCACTTAACGTCGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATTTGGGCTGCTGCAACTAGTTCAAGCGGAAGAAGAGCTAAG MKKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDADSLNVVYNLADFINKIAFGLVIWAAATSSSGRRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAACTGTTTGCTTTAGCAGCTATGGCCTTGATAGGTTTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAATGTCGCATCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATTGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCATCAAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCATTAGGTTATGTATTTGGTTACCTA---------------------------------------ACTGGTGGTGTAGACGCTGACTCACTTAACGTCGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATTTGGGCTGCTGCAACTAGTTCA---AGCGGAAGAAGAGCTAAG--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDADSLNVVYNLADFINKIAFGLVIWAAATSS-SGRRAK----------------------------------- [IV-Alpha8-18B2]_1105099396202 [IV-Alpha8-18B2] JCVI_ORF_1105099396202_GS030_Warm_Seep_19m jcvi|1105099396202| 1105099396202 JCVI ORF 1105099396202 1105099396202 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 09-FEB-2004 Warm_Seep/19m_depth/S_n.a/GS030/Warm_seep/Roca_Redonda/Galapagos_Islands Red Sea marine 0.27222222 -91.63333 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCTTTAGCAGCTATGGCTCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTCGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAACGTCGCATCAGGCTGGAGAACGTCAGTTATTGTTGCCGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCGCCGACTGTTTACAGATACATCGACTGGTTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATAGGTGGATACCTAGGTGAAGCAGGATACATTAATGCTACACTTGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCACAGAAGAGTGGTAACAAAGCTCTTGTAACTGCGTTCGGAGCAATGAGAATGATCGTTACAGTAGGTTGGGCAATTTATCCATTAGGTTATGTATTTGGTTACTTAACTGGTGGCGTAGATGCTGACTCACTAAACGTCGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCAAGCGGAAGAAGAGCTAAG MKKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAQKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDADSLNVVYNLADFINKIAFGLVIWAAATSSSGRRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCTTTAGCAGCTATGGCTCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTCGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAACGTCGCATCA---GGCTGGAGAACGTCAGTTATTGTTGCCGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCGCCGACTGTTTACAGATACATCGACTGG------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATAGGTGGATACCTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCACAGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCG---TTC---GGA---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTATCCATTAGGTTATGTATTTGGTTACTTA---------------------------------------ACTGGTGGCGTAGATGCTGACTCACTAAACGTCGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCA---AGCGGAAGAAGAGCTAAG--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAQK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDADSLNVVYNLADFINKIAFGLVIWAAATSS-SGRRAK----------------------------------- [IV-Alpha8-18B2]_1105099202318 [IV-Alpha8-18B2] JCVI_ORF_1105099202318_GS029_Coastal_3m jcvi|1105099202318| 1105099202318 JCVI ORF 1105099202318 1105099202318 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 08-FEB-2004 Coastal/3m_depth/S_34.5_psu/GS029/North_James_Bay/Santigo_Island/Galapagos_Islands Pacific Ocean marine -0.2 -90.83528 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCTTTAGCAGCTATGGCTCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTCGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAATGTCGCATCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCACCAACTGTTTACAGATACATTGACTGGTTAATCACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTTATCGGTGGATACTTAGGTGAAGCAGGATATATCAATGCTACACTTGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCACAGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATCGTTACAGTAGGTTGGGCAATTTACCCATTAGGTTATGTATTTGGTTACTTAACTGGTGGTGTAGATGCTGACTCACTAAACGTTGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCAAGCGGAAGAAGAGCTAAG MKKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAQKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDADSLNVVYNLADFINKIAFGLVIWAAATSSSGRRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCTTTAGCAGCTATGGCTCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTCGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAATGTCGCATCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCACCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTTATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCACAGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCATTAGGTTATGTATTTGGTTACTTA---------------------------------------ACTGGTGGTGTAGATGCTGACTCACTAAACGTTGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCA---AGCGGAAGAAGAGCTAAG--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAQK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDADSLNVVYNLADFINKIAFGLVIWAAATSS-SGRRAK----------------------------------- [IV-Alpha8-18B2]_1105109014764 [IV-Alpha8-18B2] JCVI_ORF_1105109014764_GS000c_Open_Ocean_5m jcvi|1105109014764| 1105109014764 JCVI ORF 1105109014764 1105109014764 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.22_0.8 other #na 25-FEB-2003 Open_Ocean/5m_depth/S_36.7_psu/GS000c/Sargasso_Stations_3/Sargasso_Sea Sargasso Sea marine 32.174835 -64.01017 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf GGGTGGGAAGGGAGTTTTTATGAAAAACTTAAACTGTTTGCTTTAGCAGCTATGGCCTTGATAGGTTTTTCAGGCATTGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAACGTCGCATCAGGCTGGAGAACTTCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCACCAACTGTTTACAGATACATTGACTGGTTAATTACAGTGCCACTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATTGGTAAAGCAAATTCTGGAATGTTCTGGAGACTGTTAATTGGTTCATTAGTAATGCTTATTGGTGGATACTTAGGTGAAGCAGGATACATTAATGCTACACTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAGGCTGGTAAAGCTGCATCTAAGAGTGGTAACAAAGCTCTTGTAACCGCATTCGGAGCAATGAGAATGATTGTTACAGTAGGTTGGGCAATTTACCCATTAGGTTATGTATTTGGTTACTTAACTGGCGGTGTAGATGCTGACTCACTTAACGTCGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCAAGCGGAAGAAGAGCTAAG GWEGSFYEKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDADSLNVVYNLADFINKIAFGLVIWAAATSSSGRRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGTGGGAAGGGAGTTTTTATGAAAAACTTAAACTGTTTGCTTTAGCAGCTATGGCCTTGATAGGTTTTTCAGGCATTGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAACGTCGCATCA---GGCTGGAGAACTTCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCACCAACTGTTTACAGATACATTGACTGG------------------------TTAATTACAGTGCCACTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---CTGTTAATTGGTTCATTAGTAATGCTTATTGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAGGCTGGTAAAGCTGCATCTAAG------AGT---GGTAACAAAGCTCTT---GTA---ACC---GCA---TTC---GGA---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCATTAGGTTATGTATTTGGTTACTTA---------------------------------------ACTGGCGGTGTAGATGCTGACTCACTTAACGTCGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCA---AGCGGAAGAAGAGCTAAG--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------GWEGSFYEKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDADSLNVVYNLADFINKIAFGLVIWAAATSS-SGRRAK----------------------------------- [IV-Alpha8-18B2]_EU079195 [IV-Alpha8-18B2] NASB_46_env_samples_EU079195 gi|156106550|gb|EU079195| Uncultured organism clone NASB 46 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 46 putative proteorhodopsin gene, partial cds EU079195 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGGTACGTTGATTGGTTAATTACAGTGCCACTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATTGGTAAAGCAAATTCTGGAATGTTCTGGAGACTGTTAATTGGTTCATTAGTAATGCTTATTGGTGGATACTTAGGTGAAGCAGGATACATTAATGCTACACTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAGGCTGGTAAAGCTGCATCTAAGAGTGGTAACAAAGCTCTTGTAACCGCATTCGGAGCAATGAGAATGATTGTTACAGTAGGATGGGCCATATAT RYVDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTACGTTGATTGG------------------------TTAATTACAGTGCCACTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---CTGTTAATTGGTTCATTAGTAATGCTTATTGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAGGCTGGTAAAGCTGCATCTAAG------AGT---GGTAACAAAGCTCTT---GTA---ACC---GCA---TTC---GGA---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGATGG---------GCCATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EF079835 [IV-Alpha8-18B2] clone_ID11003_EF079835 gi|126361759|gb|EF079835| Uncultured bacterium clone ID11003 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID11003 putative proteorhodopsin gene, partial cds. EF079835 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na #na Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGCTTGCCGCTACTGCATTCTTCTTCATGGAAGCAGGCAATGTCGCATCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATTGGTGGATACTTAGGTGAAGCAGGATACATTAATGCTACACTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCATCGAAGAGTGGTAACAAAGCACTTGTAACTGCATTCGGAGCAATGAGAATGATTGTTACAGTAGGTTGGGCCATCTACCCA MLAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACTGCATTCTTCTTCATGGAAGCAGGCAATGTCGCATCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATTGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCATCGAAG------AGT---GGTAACAAAGCACTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_DQ422567 [IV-Alpha8-18B2] clone_med-tb04-0m-c11_DQ422567 gi|90024654|gb|DQ422567| Uncultured bacterium clone med-tb04-0m-c11 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-c11 putative proteorhodopsin gene, partial cds. DQ422567 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATACATTAATGCCACACCAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCACAGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATPGFIIGMAGWVYILYEVFSGEAGKAAQKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCC------------------ACACCAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCACAGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TPG-FIIGMAGWVYILYEV-----F--S-GEAGKAAQK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_1105093509990 [IV-Alpha8-18B2] JCVI_ORF_1105093509990_GS031_Coastal_upwelling_12m jcvi|1105093509990| 1105093509990 JCVI ORF 1105093509990 1105093509990 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 10-FEB-2004 Coastal_upwelling/12m_depth/S_n.a/GS031/Upwelling/Fernandina_Island/Galapagos_Islands Pacific Ocean marine -0.3011111 -91.651665 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf GGGGGCCGGCAGCGAGAGGGAGTTTTTTATGAAAAACTTAAATTGTTTGCTTTAGCAGCTATGGCCCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTCGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAATGTCGCATCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCACCAACTGTTTACAGATACATTGACTGGTTAATCACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATACATTAATGCTACACTTGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCACAGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATCGTTACAGTAGGTTGGGCTATTTACCCATTAGGTTATGTATTTGGTTACTTAACTGGTGGTGTAGACGCTGACTCACTAAACGTTGTTTACAACTTAGCTGACTTCATAAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCAAGCGGAAGAAGAGCTAAG GGRQREGVFYEKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAQKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDADSLNVVYNLADFINKIAFGLVIWAAATSSSGRRAK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGGGCCGGCAGCGAGAGGGAGTTTTTTATGAAAAACTTAAATTGTTTGCTTTAGCAGCTATGGCCCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTCGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAATGTCGCATCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCACCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCACAGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTATGTATTTGGTTACTTA---------------------------------------ACTGGTGGTGTAGACGCTGACTCACTAAACGTTGTTTACAACTTAGCTGACTTCATAAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCA---AGCGGAAGAAGAGCTAAG--------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------GGRQREGVFYEKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAQK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDADSLNVVYNLADFINKIAFGLVIWAAATSS-SGRRAK----------------------------------- [IV-Alpha8-18B2]_1105086594846 [IV-Alpha8-18B2] JCVI_ORF_1105086594846_GS016_Coastal_Sea_2m jcvi|1105086594846| 1105086594846 JCVI ORF 1105086594846 1105086594846 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 08-janv-04 Coastal_Sea/2m_depth/S_35.8_psu/GS016/Gulf_of_Mexico/Caribbean_Sea Caribbean Sea marine 24.174723 -84.344444 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAACTGTTTGCTCTAGCAGCTATGGCCTTGATAGGATTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAATGTCGCATCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATCAATGCTACACTTGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCACAGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATCGTTACAGTAGGTTGGGCAATTTACCCATTAGGTTATGTATTTGGTTACTTAACTGGTGGTGTAGATGCTGACTCACTAAACGTAGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCAGCTGCAACTAGTTCAAGCGGAAGAAGAGCTAAG MKKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAQKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDADSLNVVYNLADFINKIAFGLVIWAAATSSSGRRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAACTGTTTGCTCTAGCAGCTATGGCCTTGATAGGATTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAATGTCGCATCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCACAGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCATTAGGTTATGTATTTGGTTACTTA---------------------------------------ACTGGTGGTGTAGATGCTGACTCACTAAACGTAGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCAGCTGCAACTAGTTCA---AGCGGAAGAAGAGCTAAG--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAQK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDADSLNVVYNLADFINKIAFGLVIWAAATSS-SGRRAK----------------------------------- [IV-Alpha8-18B2]_1105085539707 [IV-Alpha8-18B2] JCVI_ORF_1105085539707_GS051_Coral_Reef_Atoll_1m jcvi|1105085539707| 1105085539707 JCVI ORF 1105085539707 1105085539707 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 22-MAY-2004 Coral_Reef_Atoll/1m_depth/S_34.2_psu/GS051/Rangirora_Atoll/Polynesia_Archipelagos Pacific Ocean marine -15.143611 -147.435 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCTCTAGCAGCTATGGCCTTGATAGGTTTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAATGTCGCATCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCACCAACTGTTTACAGATACATTGACTGGTTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATACATTAATGCTACACTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCACAGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATCGTTACAGTAGGTTGGGCAATTTACCCATTAGGTTATGTATTTGGTTACTTAACTGGTGGTGTAGACGCTGACTCACTAAACGTAGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCAAGCGGAAGAAGAGCTAAG MKKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAQKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDADSLNVVYNLADFINKIAFGLVIWAAATSSSGRRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCTCTAGCAGCTATGGCCTTGATAGGTTTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAATGTCGCATCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCACCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCACAGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCATTAGGTTATGTATTTGGTTACTTA---------------------------------------ACTGGTGGTGTAGACGCTGACTCACTAAACGTAGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCA---AGCGGAAGAAGAGCTAAG--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAQK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDADSLNVVYNLADFINKIAFGLVIWAAATSS-SGRRAK----------------------------------- [IV-Alpha8-18B2]_1105082349162 [IV-Alpha8-18B2] JCVI_ORF_1105082349162_GS034_Coastal_3m jcvi|1105082349162| 1105082349162 JCVI ORF 1105082349162 1105082349162 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 19-FEB-2004 Coastal/3m_depth/S_n.a/GS034/North_Seamore_Island/Galapagos_Islands North Sea marine -0.38305557 -90.279724 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCTTTAGCAGCTATGGCTCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTCGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCGGGCAATGTCGCATCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATCACGGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATACATTAATGCTACACTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCACAGAAGAGCGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATCGTTACAGTAGGTTGGGCAATTTACCCATTACGTTATGTATTTGGTTACTTAACTGGTGGTGTAGACGCTGACTCACTAAACGTTGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCAAGCGGAAGAAGAGCTAGTATAGCTAAATTTAAATTAAGGGCAGTACAGTTTGTACCTGCCCTTTTTTTTTGTCTAAAAGACTTTAGTACGTTT MKKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAQKSGNKALVTAFGAMRMIVTVGWAIYPLRYVFGYLTGGVDADSLNVVYNLADFINKIAFGLVIWAAATSSSGRRASIAKFKLRAVQFVPALFFCLKDFSTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCTTTAGCAGCTATGGCTCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTCGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCGGGCAATGTCGCATCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACGGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCACAGAAG------AGC---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCATTACGTTATGTATTTGGTTACTTA---------------------------------------ACTGGTGGTGTAGACGCTGACTCACTAAACGTTGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCA---AGCGGAAGAAGAGCTAGTATAGCTAAATTTAAATTAAGGGCAGTACAGTTTGTACCTGCCCTTTTTTTTTGTCTAAAAGACTTTAGTACGTTT------------------------------ -------------------------------------------------------------------------------------------MKKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAQK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLRYVFGYL-------------TGGVDADSLNVVYNLADFINKIAFGLVIWAAATSS-SGRRASIAKFKLRAVQFVPALFFCLKDFSTF---------- [IV-Alpha8-18B2]_DQ203303 [IV-Alpha8-18B2] SS114a80A6_env_samples_DQ203303 gi|77547054|gb|DQ203303| Uncultured bacterium clone SS114a80A6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a80A6 predicted proteorhodopsin gene, partial cds DQ203303 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_80m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_2003 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGTTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATACATTAATGCTACATTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCACAGAAGAGCGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATCGTTACAGTAGGTTGGGCTATCTACCCA RYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAQKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACATTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCACAGAAG------AGC---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAQK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_DQ203762 [IV-Alpha8-18B2] SS114a0D5_env_samples_DQ203762 gi|77547972|gb|DQ203762| Uncultured bacterium clone SS114a0D5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0D5 predicted proteorhodopsin gene, partial cds DQ203762 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGTTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATACATTAATGCTACACTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGTAACAAGGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATCGTTACAGTAGGGTGGGCCATCTATCCA RYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGTAACAAGGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_1105144238290 [IV-Alpha8-18B2] JCVI_ORF_1105144238290_GS019_Coastal_2m jcvi|1105144238290| 1105144238290 JCVI ORF 1105144238290 1105144238290 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 12-janv-04 Coastal/2m_depth/S_35.4_psu/GS019/Northeast_of_Colon/Caribbean_Sea Caribbean Sea marine 10.716389 -80.25445 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAACTGTTTGCTTTAGCAGCTATGGCTCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTGGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAATGTCGCATCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCGCCAACTGTATACAGATACATTGACTGGTTAATCACTGTGCCACTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATCAATAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTTATCGGTGGTTACTTAGGTGAAGCAGGATACATCAATGCTACACTAGGTTTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGTAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATAGTTACAGTAGGTTGGGCAATTTACCCATTAGGTTATGTATTTGGTTACTTAACTGGTGGAGTAGACGCTAACTCACTTAACGTCGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCAAGCGGAAGAAGAGCTAAG MKKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAATSSSGRRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAACTGTTTGCTTTAGCAGCTATGGCTCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTGGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAATGTCGCATCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCGCCAACTGTATACAGATACATTGACTGG------------------------TTAATCACTGTGCCACTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATC---AATAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTTATCGGTGGTTACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGTAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATAGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCATTAGGTTATGTATTTGGTTACTTA---------------------------------------ACTGGTGGAGTAGACGCTAACTCACTTAACGTCGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCA---AGCGGAAGAAGAGCTAAG--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAATSS-SGRRAK----------------------------------- [IV-Alpha8-18B2]_EF079847 [IV-Alpha8-18B2] clone_ID11019_EF079847 gi|126361783|gb|EF079847| Uncultured bacterium clone ID11019 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID11019 putative proteorhodopsin gene, partial cds. EF079847 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na #na Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGGTGGCCGCTACTGCTTTCTTCTTCATGGAAGCAGGCAATGTCGCATCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATCACTGTGCCACTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATCAATAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTTATCGGTGGTTACTTAGGTGAAGCAGGATACATCAATGCTACACTAGGTTTCATCATTGGAACGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGTAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGATGGGCCATCTACCCA MVAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGTAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCTTTCTTCTTCATGGAAGCAGGCAATGTCGCATCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTGCCACTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATC---AATAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTTATCGGTGGTTACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATCATTGGAACGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGTAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGATGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGTAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EF100787 [IV-Alpha8-18B2] clone_ID29004_EF100787 gi|126513353|gb|EF100787| Uncultured bacterium clone ID29004 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID29004 putative proteorhodopsin gene, partial cds. EF100787 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-nov-07 #na surface water Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGGTAGCCGCTACTGCGTTCTTCTTCATGGAAGCAGGCAATGTCGCATCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTAACAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTGATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATCAATGCTACACTTGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGCTGGGCAATATACCCA MVAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGCGTTCTTCTTCATGGAAGCAGGCAATGTCGCATCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---AACAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTGATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGCTGG---------GCAATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_1105143345964 [IV-Alpha8-18B2] JCVI_ORF_1105143345964_GS030_Warm_Seep_19m jcvi|1105143345964| 1105143345964 JCVI ORF 1105143345964 1105143345964 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 09-FEB-2004 Warm_Seep/19m_depth/S_n.a/GS030/Warm_seep/Roca_Redonda/Galapagos_Islands Red Sea marine 0.27222222 -91.63333 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAACTGTTTGCTTTAGCAGCTATGGCTCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAATGTCGCATCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTAACAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTGATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATCAATGCTACACTTGGTTTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGCGCAATGAGAATGATCGTTACAGTAGGTTGGGCAATTTACCCATTAGGTTATGTATTTGGTTACTTAACTGGTGGTGTAGACGCTAACTCACTTAACGTCGTTTATAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATTTGGGCTGCTGCAACTAGTTCAAGCGGAAGAAGAGCTAAG MKKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAATSSSGRRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAACTGTTTGCTTTAGCAGCTATGGCTCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAATGTCGCATCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---AACAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTGATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGC---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCATTAGGTTATGTATTTGGTTACTTA---------------------------------------ACTGGTGGTGTAGACGCTAACTCACTTAACGTCGTTTATAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATTTGGGCTGCTGCAACTAGTTCA---AGCGGAAGAAGAGCTAAG--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAATSS-SGRRAK----------------------------------- [IV-Alpha8-18B2]_1105129338408 [IV-Alpha8-18B2] JCVI_ORF_1105129338408_GS034_Coastal_3m jcvi|1105129338408| 1105129338408 JCVI ORF 1105129338408 1105129338408 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 19-FEB-2004 Coastal/3m_depth/S_n.a/GS034/North_Seamore_Island/Galapagos_Islands North Sea marine -0.38305557 -90.279724 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCTTTAGCAGCTATGGCTCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTCGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAATGTCGCATCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATCAATAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTTATCGGTGGTTACTTGGGTGAAGCAGGATACATCAATGCTACACTAGGTTTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGTTGGGCAATTTACCCACTAGGTTATGTATTTGGTTACTTAACTGGTGGTGTAGACGCTAATTCGCTTAACGTCGTTTATAACTTAGCTGACTTCATTAACAAAATTGCATTCGGTCTAGTAATTTGGGCTGCTGCAACTAGTTCAAGCGGAAGAAGAGCTAAG MKKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAATSSSGRRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCTTTAGCAGCTATGGCTCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTCGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAATGTCGCATCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATC---AATAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTTATCGGTGGTTACTTGGGTGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCACTAGGTTATGTATTTGGTTACTTA---------------------------------------ACTGGTGGTGTAGACGCTAATTCGCTTAACGTCGTTTATAACTTAGCTGACTTCATTAACAAAATTGCATTCGGTCTAGTAATTTGGGCTGCTGCAACTAGTTCA---AGCGGAAGAAGAGCTAAG--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAATSS-SGRRAK----------------------------------- [IV-Alpha8-18B2]_1105091349886 [IV-Alpha8-18B2] JCVI_ORF_1105091349886_GS051_Coral_Reef_Atoll_1m jcvi|1105091349886| 1105091349886 JCVI ORF 1105091349886 1105091349886 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 22-MAY-2004 Coral_Reef_Atoll/1m_depth/S_34.2_psu/GS051/Rangirora_Atoll/Polynesia_Archipelagos Pacific Ocean marine -15.143611 -147.435 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATAAAACTAACGAAGAGGGAGTTTTTTATGAAAAAACTTAAATTGTTTGCTTTAGCAGCTATGGCTCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAATGTCGCATCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTAACAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTGATGCTAATCGGTGGATACTTAGGTGAAGCAGGATACATAAATGCTACACTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCACAAAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCGATGAGAATGATCGTTACAGTAGGTTGGGCAATTTACCCATTAGGTTATGTATTTGGTTACTTAACTGGTGGTGTAGACGCTAACTCACTAAACGTTGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTCAGAGCGGAAGAAGAGCTAAG IKLTKREFFMKKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAQKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAATSQSGRRAK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAAACTAACGAAGAGGGAGTTTTTTATGAAAAAACTTAAATTGTTTGCTTTAGCAGCTATGGCTCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAATGTCGCATCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---AACAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTGATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATA------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCACAAAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCGATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCATTAGGTTATGTATTTGGTTACTTA---------------------------------------ACTGGTGGTGTAGACGCTAACTCACTAAACGTTGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTCAG---AGCGGAAGAAGAGCTAAG--------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------IKLTKREFFMKKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAQK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAATSQ-SGRRAK----------------------------------- [IV-Alpha8-18B2]_1105136386165 [IV-Alpha8-18B2] JCVI_ORF_1105136386165_GS030_Warm_Seep_19m jcvi|1105136386165| 1105136386165 JCVI ORF 1105136386165 1105136386165 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 09-FEB-2004 Warm_Seep/19m_depth/S_n.a/GS030/Warm_seep/Roca_Redonda/Galapagos_Islands Red Sea marine 0.27222222 -91.63333 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TTGTTTGCTTTAGCAGCTATGGCTCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAATGTCGCATCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATCACTGTGCCACTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTAACAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATTAATGCTACACTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCACAGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATCGTTACAGTAGGTTGGGCAATTTACCCATTAGGTTATGTATTTGGTTACTTAACTGGTGGTGTAGACGCTAACTCACTAAACGTTGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTCAGAGCGGAAGAAGAGCTAAG LFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAQKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAATSQSGRRAK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTTGCTTTAGCAGCTATGGCTCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAATGTCGCATCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTGCCACTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---AACAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCACAGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCATTAGGTTATGTATTTGGTTACTTA---------------------------------------ACTGGTGGTGTAGACGCTAACTCACTAAACGTTGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTCAG---AGCGGAAGAAGAGCTAAG--------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------LFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAQK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAATSQ-SGRRAK----------------------------------- [IV-Alpha8-18B2]_1105081758566 [IV-Alpha8-18B2] JCVI_ORF_1105081758566_GS000d_Open_Ocean_5m jcvi|1105081758566| 1105081758566 JCVI ORF 1105081758566 1105081758566 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.22_0.8 other #na 26-FEB-2003 Open_Ocean/5m_depth/S_36.6_psu/GS000d/Sargasso_Station_13/Sargasso_Sea Sargasso Sea marine 31.175 -64.32433 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAACTGTTTGCTTTAGCAGCTATGGCCTTGATAGGTTTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCAATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAACAGGCAACGTCGCATCAGGCTGGAGAACATCAGTAATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATCACAGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTAACAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCGGGATACATCAATGCTACACTTGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAGGCTGCAGCTAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGTTGGGCAATTTACCCATTAGGTTATGTATTTGGTTACTTAACTGGTGGTGTAGACGCTAATTCACTTAACGTCGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCAAGCGGAAGAAGAGCTAAG MKKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMETGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAATSSSGRRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAACTGTTTGCTTTAGCAGCTATGGCCTTGATAGGTTTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCAATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAACAGGCAACGTCGCATCA---GGCTGGAGAACATCAGTAATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACAGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---AACAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCG------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAGGCTGCAGCTAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCATTAGGTTATGTATTTGGTTACTTA---------------------------------------ACTGGTGGTGTAGACGCTAATTCACTTAACGTCGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCA---AGCGGAAGAAGAGCTAAG--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMETGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAATSS-SGRRAK----------------------------------- [IV-Alpha8-18B2]_1112715554727 [IV-Alpha8-18B2] JCVI_ORF_1112715554727_GS122a_Open_Ocean_2m jcvi|1112715554727| 1112715554727 JCVI ORF 1112715554727 1112715554727 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 30-sept-05 Open_Ocean/2m_depth/S_35.8_psu/GS122a/International_waters_between_Madagascar_and_South_Africa/Indian_Ocean Indian Ocean marine -30.898333 40.420277 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAATAAACTTAAACTGTTTGCTTTAGCAGCTATGGCCTTGATAGGTTTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGAACCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGGATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCGGGCAATGTCGCATCAGGCTGGAGAACATCCGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATCAATAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTGATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATCAATGCTACACTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCAATTTACCCATTAGGTTATGTATTTGGTTACTTAACTGGTGGTGTAGACGCTAACTCACTTAACGTCGTTTATAACTTAGCTGACTTCATTAACAAAATTGCATTCGGTCTAGTAATTTGGGCTGCTGCAACTAGTTCTGCGGGCAGAAGAGCTAAG MNKLKLFALAAMALIGFSGIAIAADATMLNQDDFVGISFWVISMGMLAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAATSSAGRRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAATAAACTTAAACTGTTTGCTTTAGCAGCTATGGCCTTGATAGGTTTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGAACCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGGATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCGGGCAATGTCGCATCA---GGCTGGAGAACATCCGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATC---AATAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTGATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCATTAGGTTATGTATTTGGTTACTTA---------------------------------------ACTGGTGGTGTAGACGCTAACTCACTTAACGTCGTTTATAACTTAGCTGACTTCATTAACAAAATTGCATTCGGTCTAGTAATTTGGGCTGCTGCAACTAGTTCT---GCGGGCAGAAGAGCTAAG--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MNKLKLFALAAMALIGFSGIAIAADATMLNQDDFVGISFWVISMGMLAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAATSS-AGRRAK----------------------------------- [IV-Alpha8-18B2]_1105111778730 [IV-Alpha8-18B2] JCVI_ORF_1105111778730_GS014_Coastal_1m jcvi|1105111778730| 1105111778730 JCVI ORF 1105111778730 1105111778730 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 20-DEC-2003 Coastal/1m_depth/S_n.a/GS014/South_of_Charleston/SC/North_American_East_Coast Atlantic Ocean marine 32.506943 -79.263885 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATAAAACTAACGAAGAGGGAGTTTTTTATGAAAAAACTTAAACTGTTTGCTTTAGCAGCTATGGCTCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAATGTCGCATCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATCACTGTGCCACTACAGATGGTAGAGTTCTATTTAATTCTAGCAGCTATTAACAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATCAATGCTACATTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGTAACAAGGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATCGTTACAGTAGGTTGGGCAATTTACCCATTAGGTTATGTATTTGGTTACTTAACTGGTGGTGTAGATGCTAACTCACTAAACGTTGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCTGCGGGAAGAAGAGCTAAG IKLTKREFFMKKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAATSSAGRRAK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAAACTAACGAAGAGGGAGTTTTTTATGAAAAAACTTAAACTGTTTGCTTTAGCAGCTATGGCTCTGATTGGATTTTCAGGTATAGCTATTGCAGCAGACGCAACGATGTTGATGCAAGATGACTTCGTAGGAATTTCATTCTGGGTTATCTCTATGGGAATGTTAGCAGCTACTGCTTTCTTTTTCATGGAAGCAGGCAATGTCGCATCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTGCCACTACAGATGGTAGAGTTCTATTTAATTCTAGCAGCT---------ATT---AACAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACATTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGTAACAAGGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCATTAGGTTATGTATTTGGTTACTTA---------------------------------------ACTGGTGGTGTAGATGCTAACTCACTAAACGTTGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAACTAGTTCT---GCGGGAAGAAGAGCTAAG--------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------IKLTKREFFMKKLKLFALAAMALIGFSGIAIAADATMLMQDDFVGISFWVISMGMLAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAATSS-AGRRAK----------------------------------- [IV-Alpha8-18B2]_EU224289 [IV-Alpha8-18B2] clone_1812222_EU224289 gi|164698750|gb|EU224289| Uncultured bacterium clone 1812222 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 1812222 putative proteorhodopsin gene, partial cds. EU224289 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2008 #na surface water sample Indian Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGGTAGCCGCTACTGTCTTCTTCTTCATGGAAGCAGGCAATGTCGCATCAGGCTGGAGAACATCAGTAATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATACATTAATGCTACACTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGTAACAAGGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATCGTTACAGTAGGATGGGCAATATACCCA MVAATVFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTCTTCTTCTTCATGGAAGCAGGCAATGTCGCATCA---GGCTGGAGAACATCAGTAATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGTAACAAGGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGATGG---------GCAATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EU224295 [IV-Alpha8-18B2] clone_1812228_EU224295 gi|164698762|gb|EU224295| Uncultured bacterium clone 1812228 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 1812228 putative proteorhodopsin gene, partial cds. EU224295 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2008 #na surface water sample Indian Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGGTAGCCGCTACTGTCTTCTTCTTCATGGAAGCAGGCAATGTCGCATCAGGCTGGAGAACATCAGTAATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATACATTAATGCTACACTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGTAACAAGGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATCGTTACAGTAGGATGGGCAATATACCCA MVAATVFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTCTTCTTCTTCATGGAAGCAGGCAATGTCGCATCA---GGCTGGAGAACATCAGTAATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGTAACAAGGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGATGG---------GCAATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EF079838 [IV-Alpha8-18B2] clone_ID11008_EF079838 gi|126361765|gb|EF079838| Uncultured bacterium clone ID11008 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID11008 putative proteorhodopsin gene, partial cds. EF079838 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na #na Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGGTCGCCGCTACTGCTTTCTTCTTCATGGAAGCAGGCAATGTCGCATCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCACCAACTGTTTACAGATACATTGACTGGTTAATCACTGTGCCATCACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATACATTAATGCTACACTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGTAACAAAGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGGTGGGCAATTTATCCA MVAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPSQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCCGCTACTGCTTTCTTCTTCATGGAAGCAGGCAATGTCGCATCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCACCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTGCCATCACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGGTGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPSQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EU915855 [IV-Alpha8-18B2] APF1117_env_samples_EU915855 gi|229358592|gb|EU915855| Uncultured microorganism clone APF1117 putative proteorhodopsin gene, partial cds Uncultured microorganism clone APF1117 putative proteorhodopsin gene, partial cds EU915855 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample_at_200_m_depth Atlantic Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTAGCCGCTACTGCGTTCTTCTTCATGGAAGCAGGCAATGTCGCATCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATACATTAATGCTACACTAGGTTTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAATCTGGTAAAGCTGCAGCAAAAAGTGGTAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTAGGCTGGGCAATTTAT MLAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGESGKAAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTAGCCGCTACTGCGTTCTTCTTCATGGAAGCAGGCAATGTCGCATCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAATCTGGTAAAGCTGCAGCAAAA------AGT---GGTAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGCTGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GESGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EF088541 [IV-Alpha8-18B2] clone_APF1117_EF088541 gi|126843306|gb|EF088541| Uncultured bacterium clone APF1117 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone APF1117 putative proteorhodopsin gene, partial cds. EF088541 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na 200m water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGCTAGCCGCTACTGCGTTCTTCTTCATGGAAGCAGGCAATGTCGCATCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATACATTAATGCTACACTAGGTTTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAATCTGGTAAAGCTGCAGCAAAAAGTGGTAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTAGGCTGGGCAATTTATCCA MLAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGESGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTAGCCGCTACTGCGTTCTTCTTCATGGAAGCAGGCAATGTCGCATCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAATCTGGTAAAGCTGCAGCAAAA------AGT---GGTAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGCTGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GESGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EU915856 [IV-Alpha8-18B2] APF1118_env_samples_EU915856 gi|229358594|gb|EU915856| Uncultured microorganism clone APF1118 putative proteorhodopsin gene, partial cds Uncultured microorganism clone APF1118 putative proteorhodopsin gene, partial cds EU915856 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample_at_200_m_depth Atlantic Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGCGTTCTTCTTCATGGAAGCAGGCAATGTCGCATCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCACCAACTGTTTACAGATACATTGACTGGTTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTGATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATCAACGCTACACTTGGTTTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTAGGTTGGGCGATATAT MVAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCGTTCTTCTTCATGGAAGCAGGCAATGTCGCATCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCACCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTGATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCGATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EF088542 [IV-Alpha8-18B2] clone_APF1118_EF088542 gi|126843308|gb|EF088542| Uncultured bacterium clone APF1118 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone APF1118 putative proteorhodopsin gene, partial cds. EF088542 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na 200m water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTGGCCGCTACTGCGTTCTTCTTCATGGAAGCAGGCAATGTCGCATCAGGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCACCAACTGTTTACAGATACATTGACTGGTTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTGATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATCAACGCTACACTTGGTTTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTAGGTTGGGCGATATATCCA MVAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCGTTCTTCTTCATGGAAGCAGGCAATGTCGCATCA---GGCTGGAGAACATCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCACCAACTGTTTACAGATACATTGACTGG------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTGATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCGATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EF616633 [IV-Alpha8-18B2] Bacterium_HTCC7211_EF616633 gi|157502953|gb|EF616633| Bacterium HTCC7211 putative proteorhodopsin gene, partial cds. Bacterium HTCC7211 putative proteorhodopsin gene, partial cds. EF616633 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [#na] taxon:466004 genomic DNA strain 14-mars-08 #na Sargasso sea station BATS, 10 m depth Sargasso Sea marine 31.6667 -64.1667 Improvements of high-throughput culturing yielded novel SAR11 strains and other abundant marine bacteria from the Oregon coast and the Bermuda Atlantic Time Series study site Stingl,U., Tripp,H.J. and Giovannoni,S.J. ISME J 1 (4), 361-371 (2007) 18043647 #na TTAATTACTGTGCCTCTACAAATGGTTGAATTCTATTTAATTCTATCTGCTGTAGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGCTACTCGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAAGCTGCAGCAAAAAGTGGGAACAAGGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGTTGGGCAATTTACCCATTAGGTTATGTATTTGGTTACCTAACAGGTGGTGTAGATGCAGAATCACTTAACGT LITVPLQMVEFYLILSAVGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDAESLN ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCTCTACAAATGGTTGAATTCTATTTAATTCTATCTGCT---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGCTACTCGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAAGCTGCAGCAAAA------AGT---GGGAACAAGGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCATTAGGTTATGTATTTGGTTACCTA---------------------------------------ACAGGTGGTGTAGATGCAGAATCACTTAAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDAESLN------------------------------------------------------------------- [IV-Alpha8-18B2]_EF616635 [IV-Alpha8-18B2] Bacterium_HTCC7216_EF616635 gi|157502957|gb|EF616635| Bacterium HTCC7216 putative proteorhodopsin gene, partial cds. Bacterium HTCC7216 putative proteorhodopsin gene, partial cds. EF616635 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [#na] taxon:466009 genomic DNA strain 14-mars-08 #na Sargasso sea station BATS, 10 m depth Sargasso Sea marine 31.6667 -64.1667 Improvements of high-throughput culturing yielded novel SAR11 strains and other abundant marine bacteria from the Oregon coast and the Bermuda Atlantic Time Series study site Stingl,U., Tripp,H.J. and Giovannoni,S.J. ISME J 1 (4), 361-371 (2007) 18043647 #na CGGTATATTGACTGGTTAATTACTGTGCCTCTACAAATGGTTGAATTCTATTTAATTCTATCTGCTGTAGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGCTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATTGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAAGCTGCAGCAAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGTTGGGCAATTTACCCATTAGGTTATGTATTTGGTTACCTAACAGGTGGTGTAGATGCAGAATCACT RYIDWLITVPLQMVEFYLILSAVGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDAES ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTATATTGACTGG------------------------TTAATTACTGTGCCTCTACAAATGGTTGAATTCTATTTAATTCTATCTGCT---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGCTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATTGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCATTAGGTTATGTATTTGGTTACCTA---------------------------------------ACAGGTGGTGTAGATGCAGAATCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDAES--------------------------------------------------------------------- [IV-Alpha8-18B2]_EF616634 [IV-Alpha8-18B2] Bacterium_HTCC7214_EF616634 gi|157502955|gb|EF616634| Bacterium HTCC7214 putative proteorhodopsin gene, partial cds. Bacterium HTCC7214 putative proteorhodopsin gene, partial cds. EF616634 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [#na] taxon:466007 genomic DNA strain 14-mars-08 #na Sargasso sea station BATS, 10 m depth Sargasso Sea marine 31.6667 -64.1667 Improvements of high-throughput culturing yielded novel SAR11 strains and other abundant marine bacteria from the Oregon coast and the Bermuda Atlantic Time Series study site Stingl,U., Tripp,H.J. and Giovannoni,S.J. ISME J 1 (4), 361-371 (2007) 18043647 #na TTAATTACTGTGCCTCTACAAATGGTTGAATTCTATTTAATTCTATCTGCTGTAGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAAGCTGCAGCAAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGTTGGGCAATTTACCCATTAGGTTATGTATTTGGTTACCTAACAGGTGGTGTAGATGCAGAATCACTTAACGTTGTTTACAACTTAGCTGA LITVPLQMVEFYLILSAVGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDAESLNVVYNLA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCTCTACAAATGGTTGAATTCTATTTAATTCTATCTGCT---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCATTAGGTTATGTATTTGGTTACCTA---------------------------------------ACAGGTGGTGTAGATGCAGAATCACTTAACGTTGTTTACAACTTAGCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDAESLNVVYNLA------------------------------------------------------------- [IV-Alpha8-18B2]_EF088562 [IV-Alpha8-18B2] clone_AT37006_EF088562 gi|126843363|gb|EF088562| Uncultured bacterium clone AT37006 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT37006 putative proteorhodopsin gene, partial cds. EF088562 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na surface water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTTGCCGCTACTGTTTTCTTCTTCATGGAAACTGGCAACGTAGCAGCGGGCTGGAGAACTTCAGTTATCGTTGCAGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTGACTACTGGAGACTCGCCAACAGTATATAGATATATTGACTGGTTAATTACTGTACCTCTACAAATGGTTGAATTCTATTTAATTCTATCTGCTGTAGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAGAGCAGCAGCAAAAAGTGGAAACAAAGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGTTGGGCGATATACCCA MVAATVFFFMETGNVAAGWRTSVIVAGLVTGIAFIHYMYMREVWVTTGDSPTVYRYIDWLITVPLQMVEFYLILSAVGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGRAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTTTTCTTCTTCATGGAAACTGGCAACGTAGCAGCG---GGCTGGAGAACTTCAGTTATCGTTGCAGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTG------------------------------ACTACT---------------------GGAGACTCGCCAACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTACCTCTACAAATGGTTGAATTCTATTTAATTCTATCTGCT---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAGAGCAGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCGATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMETGNVAA-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGRAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EF088579 [IV-Alpha8-18B2] clone_AT37033_EF088579 gi|126843397|gb|EF088579| Uncultured bacterium clone AT37033 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT37033 putative proteorhodopsin gene, partial cds. EF088579 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na surface water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTTGCCGCTACTGTTTTCTTCTTCATGGAAACTGGCAACGTAGCAGCGGGCTGGAGAACTTCAGTAATCGTTGCAGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTGACTACTGGAGACTCGCCAACAGTATACAGATATATTGACTGGTTAATTACTGTGCCTCTACAAATGGTTGAATTCTATTTAATTCTATCTGCTGTAGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAAGCTGCAGCAAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTAGGCTGGGCGATCTACCCA MVAATVFFFMETGNVAAGWRTSVIVAGLVTGIAFIHYMYMREVWVTTGDSPTVYRYIDWLITVPLQMVEFYLILSAVGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTTTTCTTCTTCATGGAAACTGGCAACGTAGCAGCG---GGCTGGAGAACTTCAGTAATCGTTGCAGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTG------------------------------ACTACT---------------------GGAGACTCGCCAACAGTATACAGATATATTGACTGG------------------------TTAATTACTGTGCCTCTACAAATGGTTGAATTCTATTTAATTCTATCTGCT---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGCTGG---------GCGATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMETGNVAA-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_DQ903154 [IV-Alpha8-18B2] clone_HB10010_DQ903154 gi|116294037|gb|DQ903154| Uncultured bacterium clone HB10010 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone HB10010 putative proteorhodopsin gene, partial cds. DQ903154 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na East China Sea surface water (ECS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na ATGCTTGCCGCTACTGTTTTCTTCTTCATGGAAACTGGCAACGTAGCAGCGGGCTGGAGAACTTCAGTAATCGTTGCAGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGGGAGAAGTATGGGTGACTACTGGAGACTCGCCAACAGTATACAGATATATTGACTGGTTAATTACTGTGCCTCTACAAATGGTTGAATTCTATTTAATTCTATCTGCTGTAGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGCTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAAGCTGCAGCAAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTAGGTTGGGCAATCTACCCA MLAATVFFFMETGNVAAGWRTSVIVAGLVTGIAFIHYMYMGEVWVTTGDSPTVYRYIDWLITVPLQMVEFYLILSAVGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACTGTTTTCTTCTTCATGGAAACTGGCAACGTAGCAGCG---GGCTGGAGAACTTCAGTAATCGTTGCAGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGGGAGAAGTATGGGTG------------------------------ACTACT---------------------GGAGACTCGCCAACAGTATACAGATATATTGACTGG------------------------TTAATTACTGTGCCTCTACAAATGGTTGAATTCTATTTAATTCTATCTGCT---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGCTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFMETGNVAA-GWRTSVIVAGLVTGIAFIHYMYMGEVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EF100790 [IV-Alpha8-18B2] clone_ID29009_EF100790 gi|126513359|gb|EF100790| Uncultured bacterium clone ID29009 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID29009 putative proteorhodopsin gene, partial cds. EF100790 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-nov-07 #na surface water Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGGTTGCCGCTACTGTTTTCTTCTTCATGGAAACTGGCAACGTGGCAGCGGGCTGGAGAACTTCAGTAATCGTTGCAGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTGACAACTGGAGACTCGCCAACAGTATACAGATATATTGACTGGTTAATTACTGTGCCACTACAAATGGTTGAATTCTATTTAATTCTATCTGCTGTAGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAAGCTGCAGCAAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGCTGGGCAATATATCCA MVAATVFFFMETGNVAAGWRTSVIVAGLVTGIAFIHYMYMREVWVTTGDSPTVYRYIDWLITVPLQMVEFYLILSAVGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTTTTCTTCTTCATGGAAACTGGCAACGTGGCAGCG---GGCTGGAGAACTTCAGTAATCGTTGCAGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTG------------------------------ACAACT---------------------GGAGACTCGCCAACAGTATACAGATATATTGACTGG------------------------TTAATTACTGTGCCACTACAAATGGTTGAATTCTATTTAATTCTATCTGCT---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGCTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMETGNVAA-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EF088573 [IV-Alpha8-18B2] clone_AT37022_EF088573 gi|126843385|gb|EF088573| Uncultured bacterium clone AT37022 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT37022 putative proteorhodopsin gene, partial cds. EF088573 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na surface water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGCTGGCCGCTACTGTCTTCTTCTTCATGGAAACTGGCAACGTAGCAGCGGGCTGGAGAACTTCAGTTATCGTTGCAGGTCTAGTAACTGGTATAGCATTCATACACTACATGTACATGAGAGAAGTATGGGTGACTACTGGAGACTCGCCAACAGTATACAGATATATTGACTGGTTAATTACAGTGCCTCTACAAATGGTTGAATTCTATTTAATTCTATCTGCTGTAGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGCTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATATATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAAGCTGCAGCAAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGCTGGGCAATATACCCA MLAATVFFFMETGNVAAGWRTSVIVAGLVTGIAFIHYMYMREVWVTTGDSPTVYRYIDWLITVPLQMVEFYLILSAVGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGTCTTCTTCTTCATGGAAACTGGCAACGTAGCAGCG---GGCTGGAGAACTTCAGTTATCGTTGCAGGTCTAGTAACTGGTATAGCATTCATACACTACATGTACATGAGAGAAGTATGGGTG------------------------------ACTACT---------------------GGAGACTCGCCAACAGTATACAGATATATTGACTGG------------------------TTAATTACAGTGCCTCTACAAATGGTTGAATTCTATTTAATTCTATCTGCT---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGCTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATATATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGCTGG---------GCAATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFMETGNVAA-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EU915872 [IV-Alpha8-18B2] US1202015_env_samples_EU915872 gi|229358626|gb|EU915872| Uncultured microorganism clone US1202015 putative proteorhodopsin gene, partial cds Uncultured microorganism clone US1202015 putative proteorhodopsin gene, partial cds EU915872 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_surface_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTCGCCGCTACTGTTTTCTTCTTCATGGAAACTGGCAACGTAGCAGCGGGCTGGAGAACTTCAGTAATCGTTGCAGGTCTAGTAACTGGTATTGCGTTCATACACTACATGTACATGAGAGAAGTATGGGTGACTACTGGAGACTCGCCAACAGTATACAGATATATTGACTGGTTAATTACTGTGCCTCTACAAATGGTTGAATTCTATTTAATTCTATCTGCTGTAGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTATTAGGTTCAATAGTTATGCTAGTAGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCAGGTAAAGCTGCAGCAAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGCTGGGCCATCTAC MLAATVFFFMETGNVAAGWRTSVIVAGLVTGIAFIHYMYMREVWVTTGDSPTVYRYIDWLITVPLQMVEFYLILSAVGKANSGMFWRLLLGSIVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTCGCCGCTACTGTTTTCTTCTTCATGGAAACTGGCAACGTAGCAGCG---GGCTGGAGAACTTCAGTAATCGTTGCAGGTCTAGTAACTGGTATTGCGTTCATACACTACATGTACATGAGAGAAGTATGGGTG------------------------------ACTACT---------------------GGAGACTCGCCAACAGTATACAGATATATTGACTGG------------------------TTAATTACTGTGCCTCTACAAATGGTTGAATTCTATTTAATTCTATCTGCT---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTATTAGGTTCAATAGTTATGCTAGTAGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCAGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGCTGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFMETGNVAA-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSIVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EU915901 [IV-Alpha8-18B2] US120206_env_samples_EU915901 gi|229358684|gb|EU915901| Uncultured microorganism clone US120206 putative proteorhodopsin gene, partial cds Uncultured microorganism clone US120206 putative proteorhodopsin gene, partial cds EU915901 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_surface_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTCGCCGCTACTGTTTTCTTCTTCATGGAAACTGGCAACGTAGCAGCGGGCTGGAGAACTTCAGTAATCGTTGCAGGTCTAGTAACTGGTATTGCGTTCATACACTACATGTACATGAGAGAAGTATGGGTGACTACTGGAGACTCGCCAACAGTATACAGATATATTGACTGGTTAATTACTGTGCCTCTACAAATGGTTGAATTCTATTTAATTCTATCTGCTGTAGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTATTAGGTTCAATAGTTATGCTAGTAGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCAGGTAAAGCTGCAGCAAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGCTGGGCCATCTAC MLAATVFFFMETGNVAAGWRTSVIVAGLVTGIAFIHYMYMREVWVTTGDSPTVYRYIDWLITVPLQMVEFYLILSAVGKANSGMFWRLLLGSIVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTCGCCGCTACTGTTTTCTTCTTCATGGAAACTGGCAACGTAGCAGCG---GGCTGGAGAACTTCAGTAATCGTTGCAGGTCTAGTAACTGGTATTGCGTTCATACACTACATGTACATGAGAGAAGTATGGGTG------------------------------ACTACT---------------------GGAGACTCGCCAACAGTATACAGATATATTGACTGG------------------------TTAATTACTGTGCCTCTACAAATGGTTGAATTCTATTTAATTCTATCTGCT---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTATTAGGTTCAATAGTTATGCTAGTAGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCAGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGCTGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFMETGNVAA-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSIVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EU915899 [IV-Alpha8-18B2] US120201_env_samples_EU915899 gi|229358680|gb|EU915899| Uncultured microorganism clone US120201 putative proteorhodopsin gene, partial cds Uncultured microorganism clone US120201 putative proteorhodopsin gene, partial cds EU915899 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_surface_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACCGTGTTCTTCTTCATGGAAACAGGCAACGTAGCAGCGGGCTGGAGAACTTCAGTTATCGTTGCAGGTCTAGTAACTGGTATCGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTAGCACTGGAGACTCGCCGACAGTATACAGATATATTGACTGGTTAATTACTGTGCCACTACAAATGGTTGAATTCTATTTAATTCTATCTGCTGTAGGTAAAGCAAATTCAGGAATGTTCTGGAGATTGTTACTTGGATCAGTTGTTATGCTAGTAGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCTGGTGAAGCAGGTAAAGCTGCAGCAAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGCTGGGCGATCTAT MVAATVFFFMETGNVAAGWRTSVIVAGLVTGIAFIHYMYMREVWVSTGDSPTVYRYIDWLITVPLQMVEFYLILSAVGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACCGTGTTCTTCTTCATGGAAACAGGCAACGTAGCAGCG---GGCTGGAGAACTTCAGTTATCGTTGCAGGTCTAGTAACTGGTATCGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------AGCACT---------------------GGAGACTCGCCGACAGTATACAGATATATTGACTGG------------------------TTAATTACTGTGCCACTACAAATGGTTGAATTCTATTTAATTCTATCTGCT---------GTA---GGTAAAGCAAATTCA---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGATCAGTTGTTATGCTAGTAGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCT---GGTGAAGCAGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGCTGG---------GCGATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMETGNVAA-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------ST-------GDSPTVYRYIDW--------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EU915876 [IV-Alpha8-18B2] US80205_env_samples_EU915876 gi|229358634|gb|EU915876| Uncultured organism clone US80205 putative proteorhodopsin gene, partial cds Uncultured organism clone US80205 putative proteorhodopsin gene, partial cds EU915876 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 31-DEC-2009 #na ocean_surface_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGTGTTCTTCTTCATGGAAACAGGCAATGTTGCAGCAGGCTGGAGAACTTCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTATCTACTGGAGACTCGCCAACAGTTTACAGATACATTGACTGGTTAATTACTGTGCCACTACAAATGGTTGAATTCTATTTAGTTCTATCTGCTGTAGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTACTTGGTTCAATAGTTATGCTAGTAGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTATAATCGGTATGGCAGGTTGGATCTATATTCTTTATGAAATATTTTCAGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGAAACAAAGCTCTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGTTGGGCAATCTAC MVAATVFFFMETGNVAAGWRTSVIVAGLVTGIAFIHYMYMREVWVSTGDSPTVYRYIDWLITVPLQMVEFYLVLSAVGKANSGMFWRLLLGSIVMLVGGYLGEAGYINATLGFIIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTGTTCTTCTTCATGGAAACAGGCAATGTTGCAGCA---GGCTGGAGAACTTCAGTTATTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTA------------------------------TCTACT---------------------GGAGACTCGCCAACAGTTTACAGATACATTGACTGG------------------------TTAATTACTGTGCCACTACAAATGGTTGAATTCTATTTAGTTCTATCTGCT---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCAATAGTTATGCTAGTAGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTATAATCGGTATGGCAGGTTGGATCTATATTCTTTATGAAATA---------------TTT------TCA---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMETGNVAA-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------ST-------GDSPTVYRYIDW--------LITVPLQMVEFYLVLSA---V-GKANS-GM------------FWR-LLLGSIVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EF616642 [IV-Alpha8-18B2] Bacterium_HTCC8049_EF616642 gi|157502967|gb|EF616642| Bacterium HTCC8049 putative proteorhodopsin-like gene, partial sequence. Bacterium HTCC8049 putative proteorhodopsin-like gene, partial sequence. EF616642 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [#na] taxon:466037 genomic DNA strain 14-mars-08 #na Oregon coast station NH-5, 10 m depth Pacific Ocean marine 44.65167 -124.277 Improvements of high-throughput culturing yielded novel SAR11 strains and other abundant marine bacteria from the Oregon coast and the Bermuda Atlantic Time Series study site Stingl,U., Tripp,H.J. and Giovannoni,S.J. ISME J 1 (4), 361-371 (2007) 18043647 #na TGTTACGGGTGTTGCAACGCAGATGTTATGTTAGCTCAAGATGATTTCGTTGGTATTTCGTTTTGGGTAATATCTATGGGAATGTTAGCAGCAACAGCTTTCTTTTTCATGGAAACAGGCAATGTAGCAGCAGGCTGGAGAACTTCAGTTATAGTTGCAGGTCTAGTAACTGGTATTGCATTCATACACTACATGTATATGAGAGAAGTATGGGTATCTACTGGAGACTCGCCAACAGTATATAGATACATTGACTGGTTAATTACTGTGCCACTACAAATGGTTGAATTCTATTTAATTCTATCAGCTGTAGGTAAAGCAAACTCAGGAATGTTCTGGAGATTGTTACTTGGTTCAATAGTTATGCTAGTAGGTGGATATTTAGGAGAAGCTGGATACATTAACGCTACACTTGGTTTCATTATCGGTATGGCTGGATGGATCTATATTCTTTATGAAATATTTTCAGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGAAACAAAGCTCTTGTTACTGCCTTTGGTGCAATGAGAATGATCGTTACAGTAGGT CYGCCNADVMLAQDDFVGISFWVISMGMLAATAFFFMETGNVAAGWRTSVIVAGLVTGIAFIHYMYMREVWVSTGDSPTVYRYIDWLITVPLQMVEFYLILSAVGKANSGMFWRLLLGSIVMLVGGYLGEAGYINATLGFIIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTACGGGTGTTGCAACGCAGATGTTATGTTAGCTCAAGATGATTTCGTTGGTATTTCGTTTTGGGTAATATCTATGGGAATGTTAGCAGCAACAGCTTTCTTTTTCATGGAAACAGGCAATGTAGCAGCA---GGCTGGAGAACTTCAGTTATAGTTGCAGGTCTAGTAACTGGTATTGCATTCATACACTACATGTATATGAGAGAAGTATGGGTA------------------------------TCTACT---------------------GGAGACTCGCCAACAGTATATAGATACATTGACTGG------------------------TTAATTACTGTGCCACTACAAATGGTTGAATTCTATTTAATTCTATCAGCT---------GTA---GGTAAAGCAAACTCA---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCAATAGTTATGCTAGTAGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGATGGATCTATATTCTTTATGAAATA---------------TTT------TCA---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCC---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------CYGCCNADVMLAQDDFVGISFWVISMGMLAATAFFFMETGNVAA-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------ST-------GDSPTVYRYIDW--------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSIVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------G---------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EF088559 [IV-Alpha8-18B2] clone_AT37003_EF088559 gi|126843357|gb|EF088559| Uncultured bacterium clone AT37003 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT37003 putative proteorhodopsin gene, partial cds. EF088559 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na surface water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTGGCCGCTACTGTGTTCTTCTCTATGGAAACTGGTAACGTAGCATCAGGCTGGAGAACTTCAGTTATTGTTGCTGGTCTAGTAACAGGTATTGCATTCATACACTACATGTATATGAGAGAAGTATGGGTGACTACAGGTGACTCGCCAACAGTTTACAGATATATCGACTGGTTAATCACTGTGCCACTACAAATGGTTGAATTTTACTTAATTCTATCAGCTGTAGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGCTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGATGGATATATATTCTTTATGAAGTATTCTCTGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGAAACAAAGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGGTGGGCCATCTACCCA MVAATVFFSMETGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVTTGDSPTVYRYIDWLITVPLQMVEFYLILSAVGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTGTTCTTCTCTATGGAAACTGGTAACGTAGCATCA---GGCTGGAGAACTTCAGTTATTGTTGCTGGTCTAGTAACAGGTATTGCATTCATACACTACATGTATATGAGAGAAGTATGGGTG------------------------------ACTACA---------------------GGTGACTCGCCAACAGTTTACAGATATATCGACTGG------------------------TTAATCACTGTGCCACTACAAATGGTTGAATTTTACTTAATTCTATCAGCT---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGCTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGATGGATATATATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGGTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFSMETGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EF088567 [IV-Alpha8-18B2] clone_AT37014_EF088567 gi|126843373|gb|EF088567| Uncultured bacterium clone AT37014 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT37014 putative proteorhodopsin gene, partial cds. EF088567 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na surface water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTGGCCGCTACTGTTTTCTTCTTTATGGAAACTGGTAACGTAGCATCAGGCTGGAGAACTTCAGTTATTGTTGCTGGTCTAGTAACAGGTATTGCATTCATACACTATATGTATATGAGAGAAGTATGGGTGACTACAGGTGACTCGCCAACAGTTTACAGATATATCGACTGGTTAATCACTGTGCCACTACAAATGGTTGAATTTTACTTAATTCTATCAGCTGTAGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGCTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGATGGATATATATTCTTTATGAAGTATTCTCTGGTGAAGCTGGTAAAGCTGCTGCAAAAAGTGGAAACAAAGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGGTGGGCTATTTACCCA MVAATVFFFMETGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVTTGDSPTVYRYIDWLITVPLQMVEFYLILSAVGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTTTTCTTCTTTATGGAAACTGGTAACGTAGCATCA---GGCTGGAGAACTTCAGTTATTGTTGCTGGTCTAGTAACAGGTATTGCATTCATACACTATATGTATATGAGAGAAGTATGGGTG------------------------------ACTACA---------------------GGTGACTCGCCAACAGTTTACAGATATATCGACTGG------------------------TTAATCACTGTGCCACTACAAATGGTTGAATTTTACTTAATTCTATCAGCT---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGCTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGATGGATATATATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCTGGTAAAGCTGCTGCAAAA------AGT---GGAAACAAAGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGGTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMETGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EF088564 [IV-Alpha8-18B2] clone_AT37008_EF088564 gi|126843367|gb|EF088564| Uncultured bacterium clone AT37008 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT37008 putative proteorhodopsin gene, partial cds. EF088564 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na surface water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGCTAGCCGCTACTGTATTCTTCTTTATGGAAACTGGTAACGTAGCATCAGGCTGGAGAACTTCAGTTATTGTTGCTGGTCTAGTAACAGGTATTGCATTCATACACTATATGTATATGAGAGAAGTATGGGTGACTACAGGTGACTCGCCAACAGTTTACAGATATATCGACTGGTTAATCACTGTACCACTACAAATGGTTGAATTTTACTTAATTCTATCAGCTGTAGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGCTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGATGGATATATATTCTTTATGAAGTATTCTCTGGTGAAGCTGGTAAAGCTGCTGCAAAAAGTGGAAACAAAGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGTTGGGCGATCTATCCA MLAATVFFFMETGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVTTGDSPTVYRYIDWLITVPLQMVEFYLILSAVGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTAGCCGCTACTGTATTCTTCTTTATGGAAACTGGTAACGTAGCATCA---GGCTGGAGAACTTCAGTTATTGTTGCTGGTCTAGTAACAGGTATTGCATTCATACACTATATGTATATGAGAGAAGTATGGGTG------------------------------ACTACA---------------------GGTGACTCGCCAACAGTTTACAGATATATCGACTGG------------------------TTAATCACTGTACCACTACAAATGGTTGAATTTTACTTAATTCTATCAGCT---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGCTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGATGGATATATATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCTGGTAAAGCTGCTGCAAAA------AGT---GGAAACAAAGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCGATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFMETGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EU224281 [IV-Alpha8-18B2] clone_1812213_EU224281 gi|164698734|gb|EU224281| Uncultured bacterium clone 1812213 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 1812213 putative proteorhodopsin gene, partial cds. EU224281 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2008 #na surface water sample Indian Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGCTTGCCGCTACTGCGTTCTTCTTGGAAACTGGCAACGTCGCATCAGGCTGGAGAACTTCAGTTATTGTTGCAGGTCTAGTAACGGGTATTGCATTCATACACTACATGTATATGAGAGAGGTATGGGTGACTACAGGTGACTCGCAAACAGTTTACAGATATATCGACTGGTTAATCACTGTACCACTACAAATGGTTGAATTTTACTTAATTCTATCAGCTGTAGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGCTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATTAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGGATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGAAACAAAGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTAGGTTGGGCTATCTACCCA MLAATAFFLETGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVTTGDSQTVYRYIDWLITVPLQMVEFYLILSAVGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWGYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACTGCG---TTCTTCTTGGAAACTGGCAACGTCGCATCA---GGCTGGAGAACTTCAGTTATTGTTGCAGGTCTAGTAACGGGTATTGCATTCATACACTACATGTATATGAGAGAGGTATGGGTG------------------------------ACTACA---------------------GGTGACTCGCAAACAGTTTACAGATATATCGACTGG------------------------TTAATCACTGTACCACTACAAATGGTTGAATTTTACTTAATTCTATCAGCT---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGCTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGGATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATA-FFLETGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------TT-------GDSQTVYRYIDW--------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWGYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EF088575 [IV-Alpha8-18B2] clone_AT37027_EF088575 gi|126843389|gb|EF088575| Uncultured bacterium clone AT37027 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT37027 putative proteorhodopsin gene, partial cds. EF088575 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na surface water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGCTTGCCGCTACTGCGTTCTTCTTTATGGAAACTGGCAACGTCGCATCAGGCTGGAGAACTTCAGTTATTGTTGCAGGTCTAGTAACGGGTATTGCATTCATACACTACATGTATATGAGAGAGGTATGGGTGACTACAGGTGACTCGCCAACAGTTTACAGATATATCGACTGGTTAATCACTGTACCACTACAAATGGTTGAATTTTACTTAATTCTATCAGCTGTAGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGCTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATTAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGAAACAAAGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTAGGCTGGGCCATCTATCCA MLAATAFFFMETGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVTTGDSPTVYRYIDWLITVPLQMVEFYLILSAVGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACTGCGTTCTTCTTTATGGAAACTGGCAACGTCGCATCA---GGCTGGAGAACTTCAGTTATTGTTGCAGGTCTAGTAACGGGTATTGCATTCATACACTACATGTATATGAGAGAGGTATGGGTG------------------------------ACTACA---------------------GGTGACTCGCCAACAGTTTACAGATATATCGACTGG------------------------TTAATCACTGTACCACTACAAATGGTTGAATTTTACTTAATTCTATCAGCT---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGCTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGCTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFMETGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EU915880 [IV-Alpha8-18B2] US080209_env_samples_EU915880 gi|229358642|gb|EU915880| Uncultured microorganism clone US080209 putative proteorhodopsin gene, partial cds Uncultured microorganism clone US080209 putative proteorhodopsin gene, partial cds EU915880 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_surface_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGCCTTCTTCTTTATGGAAACTGGCAACGTAGCATCAGGCTGGAGAACTTCAGTTATTGTTGCTGGTCTAGTAACAGGTATTGCATTCATACACTACATGTATATGAGAGAAGTATGGGTGACTACAGGTGACTCGCCAACAGTTTATAGATATATCGACTGGTTAATCACTGTACCACTACAAATGGTTGAATTTTACTTAATTCTATCAGCTGTAGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGCTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGTAACAAAGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGTTGGGCCATCTAT MVAATAFFFMETGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVTTGDSPTVYRYIDWLITVPLQMVEFYLILSAVGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCCTTCTTCTTTATGGAAACTGGCAACGTAGCATCA---GGCTGGAGAACTTCAGTTATTGTTGCTGGTCTAGTAACAGGTATTGCATTCATACACTACATGTATATGAGAGAAGTATGGGTG------------------------------ACTACA---------------------GGTGACTCGCCAACAGTTTATAGATATATCGACTGG------------------------TTAATCACTGTACCACTACAAATGGTTGAATTTTACTTAATTCTATCAGCT---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGCTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCCATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMETGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EU915905 [IV-Alpha8-18B2] US120210_env_samples_EU915905 gi|229358692|gb|EU915905| Uncultured microorganism clone US120210 putative proteorhodopsin gene, partial cds Uncultured microorganism clone US120210 putative proteorhodopsin gene, partial cds EU915905 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_surface_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACAGTGTTCTTCTTTATGGAAACTGGCAACGTAGCATCAGGCTGGAGAACTTCAGTTATTGTTGCTGGTCTAGTAACAGGTATTGCATTCATACACTACATGTATATGAGAGAAGTATGGGTGACTACAGGTGACTCGCCAACAGTTTACAGATATATCGACTGGTTAATCACTGTACCACTACAAATGGTTGAATTTTACTTAATTCTATCAGCTGTAGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGCTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGTAACAAAGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGATGGGCCATTTAC MVAATVFFFMETGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVTTGDSPTVYRYIDWLITVPLQMVEFYLILSAVGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACAGTGTTCTTCTTTATGGAAACTGGCAACGTAGCATCA---GGCTGGAGAACTTCAGTTATTGTTGCTGGTCTAGTAACAGGTATTGCATTCATACACTACATGTATATGAGAGAAGTATGGGTG------------------------------ACTACA---------------------GGTGACTCGCCAACAGTTTACAGATATATCGACTGG------------------------TTAATCACTGTACCACTACAAATGGTTGAATTTTACTTAATTCTATCAGCT---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGCTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGATGG---------GCCATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMETGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EF088569 [IV-Alpha8-18B2] clone_AT37017_EF088569 gi|126843377|gb|EF088569| Uncultured bacterium clone AT37017 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT37017 putative proteorhodopsin gene, partial cds. EF088569 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na surface water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTGGCCGCTACTGTGTTCTTCTTTATGGAAACTGGCAACGTAGCATCAGGCTGGAGAACTTCAGTTATTGTTGCTGGTCTAGTAACAGGTATTGCATTCATACACTACATGTATATGAGAGAAGTATGGGTGACTACAGGTGACTCGCTAACAGTTTACAGATATATCGACTGGTTAATCACTGTGCCACTACAAATGGTTGAATTTTACTTAATTCTATCAGCTGTAGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGCTACTTGGTTCAGTAGTAATGCTAGTTGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGTAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGTTGGGCGATATATCCA MVAATVFFFMETGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVTTGDSLTVYRYIDWLITVPLQMVEFYLILSAVGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTGTTCTTCTTTATGGAAACTGGCAACGTAGCATCA---GGCTGGAGAACTTCAGTTATTGTTGCTGGTCTAGTAACAGGTATTGCATTCATACACTACATGTATATGAGAGAAGTATGGGTG------------------------------ACTACA---------------------GGTGACTCGCTAACAGTTTACAGATATATCGACTGG------------------------TTAATCACTGTGCCACTACAAATGGTTGAATTTTACTTAATTCTATCAGCT---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGCTACTTGGTTCAGTAGTAATGCTAGTTGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGTAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCGATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMETGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------TT-------GDSLTVYRYIDW--------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EU224302 [IV-Alpha8-18B2] clone_1812204_EU224302 gi|164698776|gb|EU224302| Uncultured bacterium clone 1812204 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 1812204 putative proteorhodopsin gene, partial cds. EU224302 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2008 #na surface water sample Indian Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGGTAGCCGCTACTGCATTCTTCTTTATGGAAACTGGCAATGTAGCATCAGGCTGGAGAACTTCAGTTATTGTTGCAGGTCTAGTAACAGGTATTGCATTCATACGCTACATGTATATGAGAGAAGTATGGGTGTCTACAGGTGACTCACCAACAGTTTACAGATATATTGACTGGTTGATCACTGTGCCACTACAAATGGTTGAATTTTACTTAATTCCATCAGCTGTAGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGCTACTTGGTTCAGTTGTGATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATTAACGCTACACTTGGTTTCATTATCGGTATGGCTGGATGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGGTGGGCCATCTATCCA MVAATAFFFMETGNVASGWRTSVIVAGLVTGIAFIRYMYMREVWVSTGDSPTVYRYIDWLITVPLQMVEFYLIPSAVGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGCATTCTTCTTTATGGAAACTGGCAATGTAGCATCA---GGCTGGAGAACTTCAGTTATTGTTGCAGGTCTAGTAACAGGTATTGCATTCATACGCTACATGTATATGAGAGAAGTATGGGTG------------------------------TCTACA---------------------GGTGACTCACCAACAGTTTACAGATATATTGACTGG------------------------TTGATCACTGTGCCACTACAAATGGTTGAATTTTACTTAATTCCATCAGCT---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGCTACTTGGTTCAGTTGTGATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGATGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMETGNVAS-GWRTSVIVAGLVTGIAFIRYMYMREVWV----------ST-------GDSPTVYRYIDW--------LITVPLQMVEFYLIPSA---V-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EF088563 [IV-Alpha8-18B2] clone_AT37007_EF088563 gi|126843365|gb|EF088563| Uncultured bacterium clone AT37007 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT37007 putative proteorhodopsin gene, partial cds. EF088563 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na surface water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTGGCCGCTACTGCCTTCTTCTTTATGGAAACTGGCAATGTAGCATCAGGCTGGAGAACTTCAGTTATTGTTGCAGGTCTAGTAACAGGTATTGCATTCATACACTACATGTATATGAGAGAAGTATGGGTGTCTACAGGTGACTCACCAACAGTTTACAGATATATTGACTGGTTGATCACTGTGCCACTACAAATGGTTGAATTTTACTTAATTCTATCAGCTGTAGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGCTACTTGGTTCAGTTGTGATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATTAACGCTACACTTGGTTTCATTATCGGTATGGCTGGATGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGATGGGCTATCTACCCA MVAATAFFFMETGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVSTGDSPTVYRYIDWLITVPLQMVEFYLILSAVGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCCTTCTTCTTTATGGAAACTGGCAATGTAGCATCA---GGCTGGAGAACTTCAGTTATTGTTGCAGGTCTAGTAACAGGTATTGCATTCATACACTACATGTATATGAGAGAAGTATGGGTG------------------------------TCTACA---------------------GGTGACTCACCAACAGTTTACAGATATATTGACTGG------------------------TTGATCACTGTGCCACTACAAATGGTTGAATTTTACTTAATTCTATCAGCT---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGCTACTTGGTTCAGTTGTGATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGATGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGATGG---------GCTATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMETGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------ST-------GDSPTVYRYIDW--------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EF088572 [IV-Alpha8-18B2] clone_AT37021_EF088572 gi|126843383|gb|EF088572| Uncultured bacterium clone AT37021 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT37021 putative proteorhodopsin gene, partial cds. EF088572 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na surface water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGCTGGCCGCTACTGCCTTCTTCTTTATGGAAACTGGCAATGTGGCATCAGGCTGGAGAACTTCAGTTATTGTTGCAGGTCTAGTAACAGGTATTGCATTCATACACTACATGTATATGAGAGAAGTATGGGTGACTACAGGTGACTCGCCAACAGTTTACAGATATATTGACTGGTTAATCACTGTGCCACTACAAATGGTTGAATTTTACTTAATTCTATCAGCTGTAGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGCTACTTGGTTCAGTTGTGATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGCTGGGCAATCTATCCA MLAATAFFFMETGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVTTGDSPTVYRYIDWLITVPLQMVEFYLILSAVGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGCCTTCTTCTTTATGGAAACTGGCAATGTGGCATCA---GGCTGGAGAACTTCAGTTATTGTTGCAGGTCTAGTAACAGGTATTGCATTCATACACTACATGTATATGAGAGAAGTATGGGTG------------------------------ACTACA---------------------GGTGACTCGCCAACAGTTTACAGATATATTGACTGG------------------------TTAATCACTGTGCCACTACAAATGGTTGAATTTTACTTAATTCTATCAGCT---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGCTACTTGGTTCAGTTGTGATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGCTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFMETGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EF088581 [IV-Alpha8-18B2] clone_AT37053_EF088581 gi|126843401|gb|EF088581| Uncultured bacterium clone AT37053 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT37053 putative proteorhodopsin gene, partial cds. EF088581 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na surface water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTTGCCGCTACTGTTTTCTTCTTTATGGAAACTGGCAATGTAGCATCAGGCTGGAGAACTTCAGTTATTGTTGCAGGTCTAGTAACAGGTATTGCATTCATACACTACATGTATATGAGAGAAGTATGGGTGACTACAGGTGACTCGCCAACAGTTTACAGATATATTGACTGGTTAATCACTGTGCCACTACAAATGGTTGAATTTTACTTAATTCTATCAGCTGTAGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGCTACTTGGTTCAGTTGTGATGCTAGTAGGTGGGTACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCGGCAAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGGTGGGCTATCTATCCA MVAATVFFFMETGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVTTGDSPTVYRYIDWLITVPLQMVEFYLILSAVGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTTTTCTTCTTTATGGAAACTGGCAATGTAGCATCA---GGCTGGAGAACTTCAGTTATTGTTGCAGGTCTAGTAACAGGTATTGCATTCATACACTACATGTATATGAGAGAAGTATGGGTG------------------------------ACTACA---------------------GGTGACTCGCCAACAGTTTACAGATATATTGACTGG------------------------TTAATCACTGTGCCACTACAAATGGTTGAATTTTACTTAATTCTATCAGCT---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGCTACTTGGTTCAGTTGTGATGCTAGTAGGTGGGTACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCGGCAAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGGTGG---------GCTATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMETGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EF079842 [IV-Alpha8-18B2] clone_ID11013_EF079842 gi|126361773|gb|EF079842| Uncultured bacterium clone ID11013 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID11013 putative proteorhodopsin gene, partial cds. EF079842 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na #na Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGCTCGCCGCTACTGCTTTCTTCTTTATGGAAACTGGCAATGTAGCATCAGGCTGGAGAACTTCAGTTATTGTTGCAGGTCTAGTAACAGGTATTGCATTCATACACTACGTGTATATGAGAGAAGTATGGGTGACTACAGGTGACTCACCAACAGTTTACAGATATATCGACTGGTTAATCACTGTACCTCTACAAATGGTTGAATTTTATTTAATTCTATCAGCTGTAGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTACTTGGTTCAGTAGTGATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGTAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGTTGGGCGATCTACCCA MLAATAFFFMETGNVASGWRTSVIVAGLVTGIAFIHYVYMREVWVTTGDSPTVYRYIDWLITVPLQMVEFYLILSAVGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTCGCCGCTACTGCTTTCTTCTTTATGGAAACTGGCAATGTAGCATCA---GGCTGGAGAACTTCAGTTATTGTTGCAGGTCTAGTAACAGGTATTGCATTCATACACTACGTGTATATGAGAGAAGTATGGGTG------------------------------ACTACA---------------------GGTGACTCACCAACAGTTTACAGATATATCGACTGG------------------------TTAATCACTGTACCTCTACAAATGGTTGAATTTTATTTAATTCTATCAGCT---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCAGTAGTGATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGTAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCGATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFMETGNVAS-GWRTSVIVAGLVTGIAFIHYVYMREVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EF079851 [IV-Alpha8-18B2] clone_ID11030_EF079851 gi|126361791|gb|EF079851| Uncultured bacterium clone ID11030 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID11030 putative proteorhodopsin gene, partial cds. EF079851 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na #na Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGGTGGCCGCTACTGCGTTCTTCTTTATGGAAACTGGCAATGTAGCATCAGGCTGGAGAACTTCAGTTATTGTTGCAGGTCTAGTAACAGGTATTGCATTCATACACTACATGTATATGAGAGAAGTATGGGTGACTACAGGTGACTCACCAACAGTTTACAGATATATCGACTGGTTAATCACTGTACCTCTACAAATGGTTGAATTTTATTTAATTCTATCAGCTGTAGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTACTTGGTTCAGTAGTGATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGTAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGTTGGGCCATCTACCCA MVAATAFFFMETGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVTTGDSPTVYRYIDWLITVPLQMVEFYLILSAVGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCGTTCTTCTTTATGGAAACTGGCAATGTAGCATCA---GGCTGGAGAACTTCAGTTATTGTTGCAGGTCTAGTAACAGGTATTGCATTCATACACTACATGTATATGAGAGAAGTATGGGTG------------------------------ACTACA---------------------GGTGACTCACCAACAGTTTACAGATATATCGACTGG------------------------TTAATCACTGTACCTCTACAAATGGTTGAATTTTATTTAATTCTATCAGCT---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCAGTAGTGATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGTAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMETGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EF079861 [IV-Alpha8-18B2] clone_ID11062_EF079861 gi|126361811|gb|EF079861| Uncultured bacterium clone ID11062 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID11062 putative proteorhodopsin gene, partial cds. EF079861 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) unknown (R105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na #na Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGGTGGCCGCTACTGTGTTCTTCTTCATGGAAGCAGGCAATGTAGCATCAGGCTGGAGAACTTCAGTTATTGTTGCTGGTCTAGTAACAGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTAGTACTGGAGACTCACCAACAGTTTACAGATACATTGACTGGTTAATTACAGTTCCATTACGAATGGTTGAATTCTATTTAATTCTTGCTGCCATTGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTACTTGGTTCAGTTGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAGCTGCTGCAAAAAGTGGAAACAAAGCACTTGTTACCGCATTTGGAGCAATGAGAATGATTGTTACAGTAGGGTGGGCTATTTATCCA MVAATVFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVSTGDSPTVYRYIDWLITVPLRMVEFYLILAAIGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTGTTCTTCTTCATGGAAGCAGGCAATGTAGCATCA---GGCTGGAGAACTTCAGTTATTGTTGCTGGTCTAGTAACAGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------AGTACT---------------------GGAGACTCACCAACAGTTTACAGATACATTGACTGG------------------------TTAATTACAGTTCCATTACGAATGGTTGAATTCTATTTAATTCTTGCTGCC---------ATT---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCAGTTGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAGCTGCTGCAAAA------AGT---GGAAACAAAGCACTT---GTT---ACC---GCA---TTT---GGA---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGGTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------ST-------GDSPTVYRYIDW--------LITVPLRMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_DQ422297 [IV-Alpha8-18B2] clone_med-20m-d9_DQ422297 gi|90024114|gb|DQ422297| Uncultured bacterium clone med-20m-d9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-d9 putative proteorhodopsin gene, partial cds. DQ422297 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTAATTACAGTTCCACTACAAATGGTGGAATTCTATTTAATTCTTGCTGCCATAGGTAAGGCAAACTCTGGAATGTTCTGGAGATTGTTACTTGGTTCAGTTGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTAGGTTGGGCTATTTACCCA RYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACAGTTCCACTACAAATGGTGGAATTCTATTTAATTCTTGCTGCC---------ATA---GGTAAGGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCAGTTGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_DQ422699 [IV-Alpha8-18B2] clone_med-tb04-20m-f5_DQ422699 gi|90024918|gb|DQ422699| Uncultured bacterium clone med-tb04-20m-f5 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-f5 putative proteorhodopsin gene, partial cds. DQ422699 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACAGTTCCACTACAAATGGTGGAATTCTATTTAATTCTTGCTGCCATAGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTACTTGGTTCAGTTGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAATGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCGGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTTCCACTACAAATGGTGGAATTCTATTTAATTCTTGCTGCC---------ATA---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCAGTTGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCG---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EF088582 [IV-Alpha8-18B2] clone_AT37055_EF088582 gi|126843403|gb|EF088582| Uncultured bacterium clone AT37055 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT37055 putative proteorhodopsin gene, partial cds. EF088582 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na surface water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTAGCCGCTACTGCTTTCTTCTTCATGGAAGCAGGCAATGTAGCATCAGGCTGGAGAACTTCAGTTATTGTTGCTGGTCTAGTAACAGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTAGCACTGGAGACTCACCAACAGTTTACAGATACATTGACTGGTTAATTACAGTTCCACTACAAATGGTTGAATTCTATTTAATTCTTGCTGCCATAGGTAAAGCAAACTCTGGAATGTTCTGGAGACTGTTAATTGGTTCAGTTGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCTGCAAAAAGTGGAAACAAAGCACTTGTTACTGCTTTTGGCGCAATGAGAATGATTGTTACAGTAGGTTGGGCTATTTACCCA MVAATAFFFMEAGNVASGWRTSVIVAGLVTGIAFIHYMYMREVWVSTGDSPTVYRYIDWLITVPLQMVEFYLILAAIGKANSGMFWRLLIGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGCTTTCTTCTTCATGGAAGCAGGCAATGTAGCATCA---GGCTGGAGAACTTCAGTTATTGTTGCTGGTCTAGTAACAGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------AGCACT---------------------GGAGACTCACCAACAGTTTACAGATACATTGACTGG------------------------TTAATTACAGTTCCACTACAAATGGTTGAATTCTATTTAATTCTTGCTGCC---------ATA---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---CTGTTAATTGGTTCAGTTGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTGCAAAA------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGC---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMEAGNVAS-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------ST-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EU079246 [IV-Alpha8-18B2] clone_B_Mtd1_019_EU079246 gi|156106651|gb|EU079246| Uncultured organism clone B Mtd1 019 putative proteorhodopsin gene, partial cds. Uncultured organism clone B Mtd1 019 putative proteorhodopsin gene, partial cds. EU079246 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; na light-energy conversion (ion transport) unknown [unclassified sequences/environmental samples] taxon:155900 genomic DNA other 27-FEB-2008 #na Sargasso Sea surface water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99-109 (2008) 18211270 #na GGATATTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCTGCAAAAAGTGGAAACAAAGCACTTGTTACTGCTTTTGGCGCAATGAGAATGATTGTTACAGTAGGTTGGGC GYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGW ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGATATTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTGCAAAA------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGC---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW--------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EU915893 [IV-Alpha8-18B2] US080227_env_samples_EU915893 gi|229358668|gb|EU915893| Uncultured microorganism clone US080227 putative proteorhodopsin gene, partial cds Uncultured microorganism clone US080227 putative proteorhodopsin gene, partial cds EU915893 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_surface_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTTGCCGCTACTGCTTTCTTCTTTATGGAAGCAGGTAATGTAGCATCAGGCTGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTGACTACTGGAGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATTACAGTTCCACTACAAATGGTTGAATTCTACTTAATTCTAGCTGCTGTAGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTACTTGGTTCAGTTGTAATGCTAGTAGGTGGATACTTAGGTGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATTGGTATGGCAGGTTGGGTATATATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCTGCAAAAAGTGGAAACAAAGCACTTGTTACTGCCTTTGGAGCAATGAGAATGATTGTTACAGTAGGGTGGGCCATCTAC MLAATAFFFMEAGNVASGWRVSMTVAGLVTGIAFIHYMYMREVWVTTGDSPTVYRYIDWLITVPLQMVEFYLILAAVGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACTGCTTTCTTCTTTATGGAAGCAGGTAATGTAGCATCA---GGCTGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTG------------------------------ACTACT---------------------GGAGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATTACAGTTCCACTACAAATGGTTGAATTCTACTTAATTCTAGCTGCT---------GTA---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCAGTTGTAATGCTAGTAGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATTGGTATGGCAGGTTGGGTATATATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTGCAAAA------AGT---GGAAACAAAGCACTT---GTT---ACT---GCC---TTT---GGA---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGGTGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFMEAGNVAS-GWRVSMTVAGLVTGIAFIHYMYMREVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILAA---V-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EU079245 [IV-Alpha8-18B2] clone_B_Mtd1_016_EU079245 gi|156106649|gb|EU079245| Uncultured organism clone B Mtd1 016 putative proteorhodopsin gene, partial cds. Uncultured organism clone B Mtd1 016 putative proteorhodopsin gene, partial cds. EU079245 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; na light-energy conversion (ion transport) unknown [unclassified sequences/environmental samples] taxon:155900 genomic DNA other 27-FEB-2008 #na Sargasso Sea surface water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99-109 (2008) 18211270 #na GGATATTTAGGTGAAGCTGGATACATCAACTCAACACTTGGTTTCATTATTGGAATGGCAGGTTGGATATACATTCTATATGAAATATTTTCAGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGAAACAAAGCACTTGTAACAGCATTTGGTGCAATGAGAATGATCGTTACAGTAGGTTGGGC GYLGEAGYINSTLGFIIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGW ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGATATTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACTCA------------------ACACTTGGT---TTCATTATTGGAATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTT------TCA---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCACTT---GTA---ACA---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GYLGE---A------G--Y-----------I----------------------NS------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW--------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EU079244 [IV-Alpha8-18B2] clone_B_Mtd1_017_EU079244 gi|156106647|gb|EU079244| Uncultured organism clone B Mtd1 017 putative proteorhodopsin gene, partial cds. Uncultured organism clone B Mtd1 017 putative proteorhodopsin gene, partial cds. EU079244 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; na light-energy conversion (ion transport) unknown [unclassified sequences/environmental samples] taxon:155900 genomic DNA other 27-FEB-2008 #na Sargasso Sea surface water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99-109 (2008) 18211270 #na GGATATTTAGGTGAAGCTGGATACATAAATGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTGTACATTCTTTATGAAGTATTTTCAGGTGAAGCTGGTAAAGCAGCAGCAAAAAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTTAAAATAGGTTGGGC GYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVKIGW ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGATATTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATA------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTGTACATTCTTTATGAAGTA---------------TTT------TCA---GGTGAAGCTGGTAAAGCAGCAGCAAAA------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTAAAATA---------------------------------------------------------------GGTTGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVKI---------------------GW--------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EU915895 [IV-Alpha8-18B2] US080229_env_samples_EU915895 gi|229358672|gb|EU915895| Uncultured microorganism clone US080229 putative proteorhodopsin gene, partial cds Uncultured microorganism clone US080229 putative proteorhodopsin gene, partial cds EU915895 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_surface_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTCGCCGCTACTGCTTTCTTCTTCATGGAAGTCGGTAATGTAGCAACAGGCTGGAGAACTTCAGTTATAGTTGCTGGTCTAGTTACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTTGCTACTGGAGACTCGCCAACAGTTTACAGATACATTGACTGGTTAATTACAGTGCCATTACAGATGGTTGAATTTTATTTAATTCTATCAGCTGTAGGTAAAGCTAATTCTGGAATGTTCTGGAGATTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTAGGTTTCATTATCGGTATGGCTGGTTGGGTGTACATCTTGTACGAAGTATTTTCAGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGAAACAAAGCGCTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGATGGGCGATCTAC MVAATAFFFMEVGNVATGWRTSVIVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILSAVGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCCGCTACTGCTTTCTTCTTCATGGAAGTCGGTAATGTAGCAACA---GGCTGGAGAACTTCAGTTATAGTTGCTGGTCTAGTTACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACT---------------------GGAGACTCGCCAACAGTTTACAGATACATTGACTGG------------------------TTAATTACAGTGCCATTACAGATGGTTGAATTTTATTTAATTCTATCAGCT---------GTA---GGTAAAGCTAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATTATCGGTATGGCTGGTTGGGTGTACATCTTGTACGAAGTA---------------TTT------TCA---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCGCTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGATGG---------GCGATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMEVGNVAT-GWRTSVIVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EU915821 [IV-Alpha8-18B2] PF12048_env_samples_EU915821 gi|229358524|gb|EU915821| Uncultured microorganism clone PF12048 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF12048 putative proteorhodopsin gene, partial cds EU915821 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTTGCCGCTACTGTTTTCTTCTTCATGGAGAGAGGCACTGTTAACCCTGCGTGGAAAACATCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCTTTCATTCACTACATGTACATGAGAGAAGTATGGGTTGCTACAGGTGACTCACCAACAGTATACAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGGTAGAATTCTACTTAATTCTAGTAGCAGTAAGAAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGAGGATACTTAGGAGAAGCTGGATATATCAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGATTTACATTCTATATGAAATATTCTCTGGTGAAGCTGGAAGAGCTGCTGCTAAAAGCGGTAACAAAGCTCTTGTAACTGCGTTCGGTGCAATGAGAATGATTGTAACTGTAGGGTGGGCTATCTAC MVAATVFFFMERGTVNPAWKTSVTVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILVAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGRAAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTTTTCTTCTTCATGGAGAGAGGCACTGTTAACCCT---GCGTGGAAAACATCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCTTTCATTCACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACA---------------------GGTGACTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGGTAGAATTCTACTTAATTCTAGTAGCA---------GTA---AGAAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGAGGATACTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGATTTACATTCTATATGAAATA---------------TTC------TCT---GGTGAAGCTGGAAGAGCTGCTGCTAAA------AGC---GGTAACAAAGCTCTT---GTA---ACT---GCG---TTC---GGT---GCAATG---AGAATGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCTATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERGTVNP-AWKTSVTVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILVA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGRAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EU915758 [IV-Alpha8-18B2] PF75111_env_samples_EU915758 gi|229358398|gb|EU915758| Uncultured microorganism clone PF75111 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF75111 putative proteorhodopsin gene, partial cds EU915758 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTTGCCGCTACTGTTTTCTTCTTCATGGAGAGAGGCACTGTTAACCCTGCGTGGAAAACATCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCTTTCATTCACTACATGTACATGAGAGAAGTATGGGTTGCTACAGGTGACTCACCAACAGTATACAGATATATTGACTGGTTAATTACTGTGCCACTACAGATGGTAGAATTCTACTTAATTCTAGTAGCAGTAAGAAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGAGGATACTTAGGAGAAGCTGGATATATCAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGATTTACATTCTATATGAAATATTCTCTGGTGAAGCCGGAAGAGCTGCTGCTAAAAGCGGTAACAAAGCTCTTGTAACTGCGTTCGGTGCAATGAGAATGATTGTAACTGTAGGCTGGGCCATCTAC MLAATVFFFMERGTVNPAWKTSVTVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILVAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGRAAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACTGTTTTCTTCTTCATGGAGAGAGGCACTGTTAACCCT---GCGTGGAAAACATCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCTTTCATTCACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACA---------------------GGTGACTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACTGTGCCACTACAGATGGTAGAATTCTACTTAATTCTAGTAGCA---------GTA---AGAAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGAGGATACTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGATTTACATTCTATATGAAATA---------------TTC------TCT---GGTGAAGCCGGAAGAGCTGCTGCTAAA------AGC---GGTAACAAAGCTCTT---GTA---ACT---GCG---TTC---GGT---GCAATG---AGAATGATTGTAACTGTA---------------------------------------------------------------GGCTGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFMERGTVNP-AWKTSVTVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILVA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGRAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EU915759 [IV-Alpha8-18B2] PF75112_env_samples_EU915759 gi|229358400|gb|EU915759| Uncultured microorganism clone PF75112 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF75112 putative proteorhodopsin gene, partial cds EU915759 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTTGCCGCTACTGTATTCTTCTTCATGGAGAGAGGCACTGTTAACCCTGCGTGGAAAACATCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCTTTCATTCGCTACATGTACATGAGAGAAGTATGGGTTGCTACAGGTGACTTACCAACAGTATACAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGGTAGAATTCTACTTAATTCTAGTAGCAGTAAGAAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGAGGATACTTAGGAGAAGCTGGATATATCAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGATTTACATTCTATATGAAATATTCTCTGGTGAAGCTGGAAGAGCTGCTGCTAAAAGCGGTAACAAAGCTCTTGTAACTGCGTTCGGTGCAATGAGAATGATTGTAACTGTGGGGTGGGCCATTTAT MVAATVFFFMERGTVNPAWKTSVTVAGLVTGIAFIRYMYMREVWVATGDLPTVYRYIDWLITVPLQMVEFYLILVAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGRAAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTATTCTTCTTCATGGAGAGAGGCACTGTTAACCCT---GCGTGGAAAACATCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCTTTCATTCGCTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACA---------------------GGTGACTTACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGGTAGAATTCTACTTAATTCTAGTAGCA---------GTA---AGAAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGAGGATACTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGATTTACATTCTATATGAAATA---------------TTC------TCT---GGTGAAGCTGGAAGAGCTGCTGCTAAA------AGC---GGTAACAAAGCTCTT---GTA---ACT---GCG---TTC---GGT---GCAATG---AGAATGATTGTAACTGTG---------------------------------------------------------------GGGTGG---------GCCATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERGTVNP-AWKTSVTVAGLVTGIAFIRYMYMREVWV----------AT-------GDLPTVYRYIDW--------LITVPLQMVEFYLILVA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGRAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_DQ926991 [IV-Alpha8-18B2] clone_PF91110_DQ926991 gi|116294097|gb|DQ926991| Uncultured bacterium clone PF91110 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF91110 putative proteorhodopsin gene, partial cds. DQ926991 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGCTTGCCGCTACTGCATTCTTCTTCATGGAGAGAGGCACTGTTAACCCTGCGTGGAAAACATCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCTTTCATTCACTACATGTACATGAGAGAAGTATGGGTTGCTACAGGTGACTCACCAACAGTATACAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGGTAGAATTCTACTTAATTCTAGTAGCAGTAAGAAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGAGGATACTTAGGAGAAGCTGGATATATCAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGATTTACATTCTATATGAAATATTCTCTGGTGAAGCTGGAAAAACTGCAGCTAAAACTGGAAACAAGCCATTAGCAGCTGCATGGGGTGCTATGAGAATGATCGTAACAATCGGCTGGGCTATTTACCCA MLAATAFFFMERGTVNPAWKTSVTVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILVAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKTAAKTGNKPLAAAWGAMRMIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACTGCATTCTTCTTCATGGAGAGAGGCACTGTTAACCCT---GCGTGGAAAACATCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCTTTCATTCACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACA---------------------GGTGACTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGGTAGAATTCTACTTAATTCTAGTAGCA---------GTA---AGAAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGAGGATACTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGATTTACATTCTATATGAAATA---------------TTC------TCT---GGTGAAGCTGGAAAAACTGCAGCTAAA------ACT---GGAAACAAGCCATTA---GCA---GCT---GCA---TGG---GGT---GCTATG---AGAATGATCGTAACAATC---------------------------------------------------------------GGCTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFMERGTVNP-AWKTSVTVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILVA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKTAAK--T-GNKPL-A-A-A-W-G-AM-RMIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_DQ927008 [IV-Alpha8-18B2] clone_PF91136_DQ927008 gi|116294131|gb|DQ927008| Uncultured bacterium clone PF91136 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF91136 putative proteorhodopsin gene, partial cds. DQ927008 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGGTTGCCGCTACTGTGTTCTTCTTTATGGAGAGAGGCACTGTTAACCCTGCGTGGAAAACATCAGTAACTGTTGCGGGTCTTGTAACTGGTATTGCTTTCATTCACTACATGTACATGAGAGAAGTATGGGTTGCTACAGGTGACTCACCAACAGTATACAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGGTAGAATTCTACTTAATTCTAGTAGCAGTAAGAAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGAGGATACTTAGGAGAAGCTGGATATATCAATGCTACACTTGGTTATGTAATCGGTATGGCTGGATGGATTTACATTCTATATGAAATATTCTCTGGTGAAGCTGGAAGAGCTGCTGCTAAAAGCGGTAACAAAGCTCTTGTAACTGCGTTCGGTGCAATGAGAATGATTGTAACTGTAGGGTGGGCCATCTACCCA MVAATVFFFMERGTVNPAWKTSVTVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILVAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGYVIGMAGWIYILYEIFSGEAGRAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTGTTCTTCTTTATGGAGAGAGGCACTGTTAACCCT---GCGTGGAAAACATCAGTAACTGTTGCGGGTCTTGTAACTGGTATTGCTTTCATTCACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACA---------------------GGTGACTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGGTAGAATTCTACTTAATTCTAGTAGCA---------GTA---AGAAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGAGGATACTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTTGGT---TATGTAATCGGTATGGCTGGATGGATTTACATTCTATATGAAATA---------------TTC------TCT---GGTGAAGCTGGAAGAGCTGCTGCTAAA------AGC---GGTAACAAAGCTCTT---GTA---ACT---GCG---TTC---GGT---GCAATG---AGAATGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERGTVNP-AWKTSVTVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILVA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-YVIGMAGWIYILYEI-----F--S-GEAGRAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EU915837 [IV-Alpha8-18B2] PF12021_env_samples_EU915837 gi|229358556|gb|EU915837| Uncultured microorganism clone PF12021 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF12021 putative proteorhodopsin gene, partial cds EU915837 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTAGCCGCTACTGTATTCTTCTTCATGGAGAGAGGCACTGTTAACCCTGCGTGGAAAACATCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCTTTCATTCACTACATGTACATGAGAGAAGTATGGGTTGCTACAGGTGACTCACCAACAGTATACAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGGTAGAATTCTACTTAATTCTAGTAGCAGTAAGAAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGAGGATACTTAGGAGAAGCTGGATATATCAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGATTTACATTCTATATGAAATATTCTCTGGTGAAGCTGGAAGAGCTGCTGCTAAAAGCGGTAACAAAGCTCTTGTAACTGCGTTCGGTGCAATGAGAATGATTGTAACTGTAGGTTGGGCGATCTAC MVAATVFFFMERGTVNPAWKTSVTVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILVAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGRAAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTATTCTTCTTCATGGAGAGAGGCACTGTTAACCCT---GCGTGGAAAACATCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCTTTCATTCACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACA---------------------GGTGACTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGGTAGAATTCTACTTAATTCTAGTAGCA---------GTA---AGAAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGAGGATACTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGATTTACATTCTATATGAAATA---------------TTC------TCT---GGTGAAGCTGGAAGAGCTGCTGCTAAA------AGC---GGTAACAAAGCTCTT---GTA---ACT---GCG---TTC---GGT---GCAATG---AGAATGATTGTAACTGTA---------------------------------------------------------------GGTTGG---------GCGATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERGTVNP-AWKTSVTVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILVA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGRAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EU915802 [IV-Alpha8-18B2] PF92084_env_samples_EU915802 gi|229358486|gb|EU915802| Uncultured microorganism clone PF92084 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF92084 putative proteorhodopsin gene, partial cds EU915802 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTTGCCGCTACTGTATTCTTCTTCATGGAGAGAGGCACTGTTAACCCTGCGTGGAAAACATCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCTTTCATTCACTACATGTACATGAGAGAAGTATGGGTTGCTACAGGTGACTCACCAACAGTATACAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGGTAGAATTCTACTTAATTCTAGTAGCAGTAAGAAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGAGGATACTTAGGAGAAGCTGGATATATCAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGATTTACATTCTATATGAAATATTCTCTGGTGAAGCTGGAAGAGCTGCTGCTAAAAGCGGTAACAAAGCTCTTGTAACTGCGTTCGGTGCAATGAGGATGATTGTAACTGTAGGTTGGGCCATATAT MVAATVFFFMERGTVNPAWKTSVTVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILVAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGRAAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTATTCTTCTTCATGGAGAGAGGCACTGTTAACCCT---GCGTGGAAAACATCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCTTTCATTCACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACA---------------------GGTGACTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGGTAGAATTCTACTTAATTCTAGTAGCA---------GTA---AGAAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGAGGATACTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGATTTACATTCTATATGAAATA---------------TTC------TCT---GGTGAAGCTGGAAGAGCTGCTGCTAAA------AGC---GGTAACAAAGCTCTT---GTA---ACT---GCG---TTC---GGT---GCAATG---AGGATGATTGTAACTGTA---------------------------------------------------------------GGTTGG---------GCCATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERGTVNP-AWKTSVTVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILVA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGRAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_DQ887801 [IV-Alpha8-18B2] clone_PF10029_DQ887801 gi|116294302|gb|DQ887801| Uncultured bacterium clone PF10029 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF10029 putative proteorhodopsin gene, partial cds. DQ887801 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2007 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGGTAGCCGCTACTGTCTTCTTCTTCATGGAGAGAGGCACTGTTAACCCTGCGTGGAAAACATCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCTTTCATTCACTACATGTACATGAGAGAAGTATGGGTTGCTACAGGTGACTCACCAACAGTATACAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGGTAGAATTCTACTTAATTCTAGTAGCAGTAAGAAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGAGGATACTTAGGAGAAGCTGGATATATCAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGATTTACATTCTATATGAAATATTCTCTGGTGAAGCTGGAAGAGCTGCTGCTAAAAGCGGTAACAAAGCTCTTGTAACTGCGTTCGGTGCAATGAGAATGATTGTAACTGTAGGTTGGGCCATTTATCCA MVAATVFFFMERGTVNPAWKTSVTVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILVAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGRAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTCTTCTTCTTCATGGAGAGAGGCACTGTTAACCCT---GCGTGGAAAACATCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCTTTCATTCACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACA---------------------GGTGACTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGGTAGAATTCTACTTAATTCTAGTAGCA---------GTA---AGAAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGAGGATACTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGATTTACATTCTATATGAAATA---------------TTC------TCT---GGTGAAGCTGGAAGAGCTGCTGCTAAA------AGC---GGTAACAAAGCTCTT---GTA---ACT---GCG---TTC---GGT---GCAATG---AGAATGATTGTAACTGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERGTVNP-AWKTSVTVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILVA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGRAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EU916060 [IV-Alpha8-18B2] clone_A150053_EU916060 gi|229359001|gb|EU916060| Uncultured bacterium clone A150053 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A150053 putative proteorhodopsin gene, partial cds. EU916060 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTATTAGGCTCTGTATTCTTCTTCATGGAGAGAGGCACTGTTAACCCTGCGTGGAAAACATCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCTTTCATTCACTACATGTACATGAGAGAAGTATGGGTTGCTACAGGTGACTCACCAACAGTATACAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGGTAGAATTCTACTTAATTCTAGTAGCAGTAAGAAAAGCAAGTTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAGTCGGAGGATACTTAGGAGAAGCTGGATATATCAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGATTTACATTCTATATGAAATATTCTCTGGTGAAGCTGGAAGAGCTGCTGCTAAAAGCGGTAACAAAGCTCTTGTAACTGCGTTCGGTGCAATGAGAATGATTGTAACTGTAGGTTGGGCCATATACCC LLGSVFFFMERGTVNPAWKTSVTVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILVAVRKASSGMFWRLLIGSLVMLVGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGRAAAKSGNKALVTAFGAMRMIVTVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGGCTCTGTATTCTTCTTCATGGAGAGAGGCACTGTTAACCCT---GCGTGGAAAACATCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCTTTCATTCACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACA---------------------GGTGACTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGGTAGAATTCTACTTAATTCTAGTAGCA---------GTA---AGAAAAGCAAGTTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAGTCGGAGGATACTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGATTTACATTCTATATGAAATA---------------TTC------TCT---GGTGAAGCTGGAAGAGCTGCTGCTAAA------AGC---GGTAACAAAGCTCTT---GTA---ACT---GCG---TTC---GGT---GCAATG---AGAATGATTGTAACTGTA---------------------------------------------------------------GGTTGG---------GCCATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LLGSVFFFMERGTVNP-AWKTSVTVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILVA---V-RKASS-GM------------FWR-LLIGSLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGRAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EU915859 [IV-Alpha8-18B2] APF1121_env_samples_EU915859 gi|229358600|gb|EU915859| Uncultured microorganism clone APF1121 putative proteorhodopsin gene, partial cds Uncultured microorganism clone APF1121 putative proteorhodopsin gene, partial cds EU915859 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample_at_200_m_depth Atlantic Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTATTAGCGGCTACTGTATTCTTCTTCATGGAGAGAGGTACTGTTAACCCTGCGTGGAAAACATCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCTTTCATTCACTACATGTACATGAGAGAAGTATGGGTTGCTACAGGTGACTCACCAACAGTATACAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGGTAGAATTCTACTTAATTTTAGTAGCAGTAAGAAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGAGGATACTTAGGAGAAGCTGGATACATCAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGATTTACATTCTATATGAAATATTCTCTGGTGAAGCTGGAAGAGCTGCTGCTAAAAGTGGTAACAAAGCTCTTGTAACTGCGTTCGGTGCAATGAGAATGATTGTAACTGTAGGTTGGGCAATATAC LLAATVFFFMERGTVNPAWKTSVTVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILVAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGRAAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTCATGGAGAGAGGTACTGTTAACCCT---GCGTGGAAAACATCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCTTTCATTCACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACA---------------------GGTGACTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGGTAGAATTCTACTTAATTTTAGTAGCA---------GTA---AGAAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGAGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGATTTACATTCTATATGAAATA---------------TTC------TCT---GGTGAAGCTGGAAGAGCTGCTGCTAAA------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCG---TTC---GGT---GCAATG---AGAATGATTGTAACTGTA---------------------------------------------------------------GGTTGG---------GCAATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFMERGTVNP-AWKTSVTVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILVA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGRAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EF088545 [IV-Alpha8-18B2] clone_APF1121_EF088545 gi|126843314|gb|EF088545| Uncultured bacterium clone APF1121 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone APF1121 putative proteorhodopsin gene, partial cds. EF088545 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na 200m water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na CTATTAGCGGCTACTGTATTCTTCTTCATGGAGAGAGGTACTGTTAACCCTGCGTGGAAAACATCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCTTTCATTCACTACATGTACATGAGAGAAGTATGGGTTGCTACAGGTGACTCACCAACAGTATACAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGGTAGAATTCTACTTAATTTTAGTAGCAGTAAGAAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGAGGATACTTAGGAGAAGCTGGATACATCAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGATTTACATTCTATATGAAATATTCTCTGGTGAAGCTGGAAGAGCTGCTGCTAAAAGTGGTAACAAAGCTCTTGTAACTGCGTTCGGTGCAATGAGAATGATTGTAACTGTAGGTTGGGCAATATACCCA LLAATVFFFMERGTVNPAWKTSVTVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILVAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGRAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTCATGGAGAGAGGTACTGTTAACCCT---GCGTGGAAAACATCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCTTTCATTCACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACA---------------------GGTGACTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGGTAGAATTCTACTTAATTTTAGTAGCA---------GTA---AGAAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGAGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGATTTACATTCTATATGAAATA---------------TTC------TCT---GGTGAAGCTGGAAGAGCTGCTGCTAAA------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCG---TTC---GGT---GCAATG---AGAATGATTGTAACTGTA---------------------------------------------------------------GGTTGG---------GCAATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFMERGTVNP-AWKTSVTVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILVA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGRAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_DQ903119 [IV-Alpha8-18B2] clone_A1S0005_DQ903119 gi|116293967|gb|DQ903119| Uncultured bacterium clone A1S0005 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A1S0005 putative proteorhodopsin gene, partial cds. DQ903119 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na South China Sea surface water (SCS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na ATGGTGGCCGCTACTGCATTCTTCTTCATGGAGAGAGGTACAGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGAAGTATGGGTTGCTACAGGTGACTCACCAACAGTATACAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGGTAGAATTCTACTTAATTCTAGTAGCAGTAAGAAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGAGGATACTTAGGAGAAGCTGGATATATCAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGATTTACATTCTATATGAAATATTCTCTGGTGAAGCTGGAAGAGCTGCTGCTAAAAGCGGTAACAAAGCTCTTGTAACTGCGTTCGGTGCAATGAGAATGATTGTAACTGTAGGCTGGGCTATATACCCA MVAATAFFFMERGTVAPGWKTSVTVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILVAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGRAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCATTCTTCTTCATGGAGAGAGGTACAGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGGGAAGTATGGGTT------------------------------GCTACA---------------------GGTGACTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGGTAGAATTCTACTTAATTCTAGTAGCA---------GTA---AGAAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGAGGATACTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGATTTACATTCTATATGAAATA---------------TTC------TCT---GGTGAAGCTGGAAGAGCTGCTGCTAAA------AGC---GGTAACAAAGCTCTT---GTA---ACT---GCG---TTC---GGT---GCAATG---AGAATGATTGTAACTGTA---------------------------------------------------------------GGCTGG---------GCTATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMERGTVAP-GWKTSVTVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILVA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGRAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_DQ422612 [IV-Alpha8-18B2] clone_med-tb04-0m-g10_DQ422612 gi|90024744|gb|DQ422612| Uncultured bacterium clone med-tb04-0m-g10 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-g10 putative proteorhodopsin gene, partial cds. DQ422612 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGGTACATAGACTGGCTAATTACTGTGCCATTACAGATGGTAGAATTCTACTTAATTCTAGTAGCAGTAAGAAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGAGGATACTTAGGAGAAGCTGGATACATCAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGATTTACATTCTATATGAAATATTCTCTGGTGAAGCTGGAAGAGCTGCTGCTAAAAGTGGTAACAAAGCTCTTGTAACTGCGTTCGGTGCAATGAGAATGATTGTAACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQMVEFYLILVAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGRAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATAGACTGG------------------------CTAATTACTGTGCCATTACAGATGGTAGAATTCTACTTAATTCTAGTAGCA---------GTA---AGAAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGAGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGATTTACATTCTATATGAAATA---------------TTC------TCT---GGTGAAGCTGGAAGAGCTGCTGCTAAA------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCG---TTC---GGT---GCAATG---AGAATGATTGTAACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYLILVA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGRAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EF088621 [IV-Alpha8-18B2] PF13022_env_samples_EF088621 gi|126843492|gb|EF088621| Uncultured bacterium clone PF13022 putative proteorhodopsin gene, partial cds Uncultured bacterium clone PF13022 putative proteorhodopsin gene, partial cds EF088621 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na surface_water_sample Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGCTCGCCGCTACTGTTTTCTTCTTCATGGAGAGAAGTACTGTTAATCCTGCTTGGAAAACATCAGTAACTGTTGCTGGTCTAGTAACTGGTATTGCTTTTATACACTACATGTATATGAGAGAAGTATGGGTTGCTACAGGTGACTCACCAACAGTGTACAGATATATTGACTGGTTAATTACAGTGCCATTACAGATGGTAGAATTCTACTTAATTCTAGTGGCAGTAAGAAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGAGGATACTTAGGAGAGGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCAGGTTGGGTAGACATTCTGTATGAAATATTCTCTGGTGAAGCTGGAAAAGCTGCTGCTAAGAGCGGAAATAAAGCTCTAGTAACTGCGTTCGGTGCAATGAGAATGATTGTAACTGTAGGGTGGGCTATTTACCCA MLAATVFFFMERSTVNPAWKTSVTVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILVAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVDILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTCGCCGCTACTGTTTTCTTCTTCATGGAGAGAAGTACTGTTAATCCT---GCTTGGAAAACATCAGTAACTGTTGCTGGTCTAGTAACTGGTATTGCTTTTATACACTACATGTATATGAGAGAAGTATGGGTT------------------------------GCTACA---------------------GGTGACTCACCAACAGTGTACAGATATATTGACTGG------------------------TTAATTACAGTGCCATTACAGATGGTAGAATTCTACTTAATTCTAGTGGCA---------GTA---AGAAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGAGGATACTTAGGAGAG---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCAGGTTGGGTAGACATTCTGTATGAAATA---------------TTC------TCT---GGTGAAGCTGGAAAAGCTGCTGCTAAG------AGC---GGAAATAAAGCTCTA---GTA---ACT---GCG---TTC---GGT---GCAATG---AGAATGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFMERSTVNP-AWKTSVTVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILVA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVDILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_1105158004352 [IV-Alpha8-18B2] JCVI_ORF_1105158004352_GS023_Open_Ocean_2m jcvi|1105158004352| 1105158004352 JCVI ORF 1105158004352 1105158004352 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 21-janv-04 Open_Ocean/2m_depth/S_32.6_psu/GS023/30_miles_from_Cocos_Island/Eastern_Tropical_Pacific Pacific Ocean marine 5.64 -86.56528 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAACTGTTTGCTCTTGCAGCTGTTGCCTTAACAGGTTTAACAGGAATTGCGCATGCAGCAGACGCAACGATGTTGGCACAGGATGACTTCGTTGGAATTTCCTTCTGGGTAATTTCAATGGGTATGTTAGCAGCTACAGCGTTTTTCTTTATGGAAAGAAACACTGTTGCTCCTGGCTGGAAAACATCAGTGACTGTTGCTGGTCTAGTAACTGGTATTGCTTTCATTCACTACATGTACATGAGAGAAGTATGGGTTGCTACAGGTGACTCACCAACAGTATACAGATATATTGACTGGTTAATTACAGTTCCATTACAGATGGTAGAGTTCTACCTAATTCTAGTGGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGTTAATCGGAGGATATCTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCGTAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGAAGAGCTGCTGCTAAAAGCGGTAATAAAGCTCTAGTGACTGCGTTCGGTGCAATGAGAATGATTGTTACCGTAGGTTGGGCTATTTATCCATTAGGTTATGTATTTGGTTACCTAACAGGTGGTGTAGATGCTAACTCACTAAACGTTGTTTACAACTTAGCTGACTTTATAAATAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAGTAAGTTCAGCTGGTGCAAGAGCAAGA MKKLKLFALAAVALTGLTGIAHAADATMLAQDDFVGISFWVISMGMLAATAFFFMERNTVAPGWKTSVTVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILVAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEIFSGEAGRAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAAVSSAGARAR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAACTGTTTGCTCTTGCAGCTGTTGCCTTAACAGGTTTAACAGGAATTGCGCATGCAGCAGACGCAACGATGTTGGCACAGGATGACTTCGTTGGAATTTCCTTCTGGGTAATTTCAATGGGTATGTTAGCAGCTACAGCGTTTTTCTTTATGGAAAGAAACACTGTTGCTCCT---GGCTGGAAAACATCAGTGACTGTTGCTGGTCTAGTAACTGGTATTGCTTTCATTCACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACA---------------------GGTGACTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACAGTTCCATTACAGATGGTAGAGTTCTACCTAATTCTAGTGGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGTTAATCGGAGGATATCTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCGTAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGAAGAGCTGCTGCTAAA------AGC---GGTAATAAAGCTCTA---GTG---ACT---GCG---TTC---GGT---GCAATG---AGAATGATTGTTACCGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCATTAGGTTATGTATTTGGTTACCTA---------------------------------------ACAGGTGGTGTAGATGCTAACTCACTAAACGTTGTTTACAACTTAGCTGACTTTATAAATAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAGTAAGTTCA---GCTGGTGCAAGAGCAAGA--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALAAVALTGLTGIAHAADATMLAQDDFVGISFWVISMGMLAATAFFFMERNTVAP-GWKTSVTVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILVA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEI-----F--S-GEAGRAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAAVSS-AGARAR----------------------------------- [IV-Alpha8-18B2]_DQ927003 [IV-Alpha8-18B2] clone_PF91130_DQ927003 gi|116294121|gb|DQ927003| Uncultured bacterium clone PF91130 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF91130 putative proteorhodopsin gene, partial cds. DQ927003 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGGTAGCCGCTACTGCCTTCTTCTTCATGGAGAGAAGCACTGTTAATCCTGCATGGAAAACATCGGTAACTGTTGCTGGTTTGGTAACTGGTATTGCTTTCATTCACTACATGTATATGAGAGAAGTATGGGTTGCTACAAATGATTCACCAACAGTATACAGATATATTGACTGGCTAATTACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCACTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGAAAAGCTGCTGCTAAGAGCGGAAATAAAGCTCTAGTAACTGCCTTCGGTGCAATGAGAATGATTGTAACTGTAGGTTGGGCGATTTACCCA MVAATAFFFMERSTVNPAWKTSVTVAGLVTGIAFIHYMYMREVWVATNDSPTVYRYIDWLITVPLQMVEFYLILVAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGCCTTCTTCTTCATGGAGAGAAGCACTGTTAATCCT---GCATGGAAAACATCGGTAACTGTTGCTGGTTTGGTAACTGGTATTGCTTTCATTCACTACATGTATATGAGAGAAGTATGGGTT------------------------------GCTACA---------------------AATGATTCACCAACAGTATACAGATATATTGACTGG------------------------CTAATTACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCACTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCTGCTAAG------AGC---GGAAATAAAGCTCTA---GTA---ACT---GCC---TTC---GGT---GCAATG---AGAATGATTGTAACTGTA---------------------------------------------------------------GGTTGG---------GCGATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMERSTVNP-AWKTSVTVAGLVTGIAFIHYMYMREVWV----------AT-------NDSPTVYRYIDW--------LITVPLQMVEFYLILVA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EU915752 [IV-Alpha8-18B2] PF75081_env_samples_EU915752 gi|229358386|gb|EU915752| Uncultured microorganism clone PF75081 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF75081 putative proteorhodopsin gene, partial cds EU915752 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na GTATTAGCGGCTACTGTATTCTTCTTCATGGAGAGAGGTACTGTTAACCCTGCGTGGAAAACATCAGTAACTGTTGCTGGTCTAGTAACTGGTATTGCTTTCATTCACTACATGTATATGAGAGAAGTATGGGTTGCTACAGGTGACTCACCAACAGTATATAGATATATTGACTGGTTAATTACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCAGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAGCTGCTGCTAAGAGCGGAAACAAAGCTCTTGTAACTGCGTTCGGTGCAATGAGAATGATTGTAACTGTAGGCTGGGCGATTTAT VLAATVFFFMERGTVNPAWKTSVTVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILVAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGGCTACTGTATTCTTCTTCATGGAGAGAGGTACTGTTAACCCT---GCGTGGAAAACATCAGTAACTGTTGCTGGTCTAGTAACTGGTATTGCTTTCATTCACTACATGTATATGAGAGAAGTATGGGTT------------------------------GCTACA---------------------GGTGACTCACCAACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCA---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAGCTGCTGCTAAG------AGC---GGAAACAAAGCTCTT---GTA---ACT---GCG---TTC---GGT---GCAATG---AGAATGATTGTAACTGTA---------------------------------------------------------------GGCTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------VLAATVFFFMERGTVNP-AWKTSVTVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILVA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_DQ887796 [IV-Alpha8-18B2] clone_PF10024_DQ887796 gi|116294292|gb|DQ887796| Uncultured bacterium clone PF10024 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF10024 putative proteorhodopsin gene, partial cds. DQ887796 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2007 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na GTATTAGCGGCTACTGTATTCTTCTTCATGGAGAGAGGTACTGTTAACCCTGCGTGGAAAACATCAGTAACTGTTGCTGGTCTAGTAACTGGTATTGCTTTCATTCACTACATGTATATGAGAGAAGTATGGGTTGCTACAGGTGACTCACCAACAGTATATAGATATATTGACTGGTTAATTACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGCTCACTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCGGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAGCTGCTGCTAAGAGCGGAAACAAAGCTCTTGTAACTGCGTTCGGTGCAATGAGAATGATTGTAACTGTAGGCTGGGCTATCTACCCA VLAATVFFFMERGTVNPAWKTSVTVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILVAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGGCTACTGTATTCTTCTTCATGGAGAGAGGTACTGTTAACCCT---GCGTGGAAAACATCAGTAACTGTTGCTGGTCTAGTAACTGGTATTGCTTTCATTCACTACATGTATATGAGAGAAGTATGGGTT------------------------------GCTACA---------------------GGTGACTCACCAACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGCTCACTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCG------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAGCTGCTGCTAAG------AGC---GGAAACAAAGCTCTT---GTA---ACT---GCG---TTC---GGT---GCAATG---AGAATGATTGTAACTGTA---------------------------------------------------------------GGCTGG---------GCTATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------VLAATVFFFMERGTVNP-AWKTSVTVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILVA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_DQ903121 [IV-Alpha8-18B2] clone_A1S0008_DQ903121 gi|116293971|gb|DQ903121| Uncultured bacterium clone A1S0008 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A1S0008 putative proteorhodopsin gene, partial cds. DQ903121 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na South China Sea surface water (SCS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na ATGGTGGCCGCTACTGTATTCTTCTTCATGGAGAGAGGTACTGTTAACCCTGCGTGGAAAACATCAGTAACTGTTGCTGGTCTAGTAACTGGTATTGCTTTCATTCACTACATGTATATGAGAGAAGTATGGGTTGCTACAGGTGACTCACCAACAGTATATAGATATATTGACTGGTTAATTACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGCTCACTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCGGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAGCTGCTGCTAAGAGCGGAAACAAAGCTCTTGTAACTGCGTTCGGTGCAATGAGAATGATTGTAACTGTAGGCTGGCGATCTACCCA MVAATVFFFMERGTVNPAWKTSVTVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILVAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWRST ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTATTCTTCTTCATGGAGAGAGGTACTGTTAACCCT---GCGTGGAAAACATCAGTAACTGTTGCTGGTCTAGTAACTGGTATTGCTTTCATTCACTACATGTATATGAGAGAAGTATGGGTT------------------------------GCTACA---------------------GGTGACTCACCAACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGCTCACTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCG------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAGCTGCTGCTAAG------AGC---GGAAACAAAGCTCTT---GTA---ACT---GCG---TTC---GGT---GCAATG---AGAATGATTGTAACTGTA---------------------------------------------------------------GGCTGG---------CGATCTACC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERGTVNP-AWKTSVTVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILVA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---RST--------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_DQ903133 [IV-Alpha8-18B2] clone_A1S0036_DQ903133 gi|116293995|gb|DQ903133| Uncultured bacterium clone A1S0036 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A1S0036 putative proteorhodopsin gene, partial cds. DQ903133 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na South China Sea surface water (SCS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na ATGGTGGCCGCTACTGTATTCTTCTTCATGGAGAGAGGTACTGTTAACCCTGCGTGGAAAACATCAGTAACTGTTGCTGGTCTAGTAACTGGTATTGCTTTCATTCACTACATGTATATGAGAGAAGTATGGGTTGCTACAGGTGACTCACCAACAGTATATAGATATATTGACTGGTTAATTACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGCTCACTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCGGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAGCTGCTGCTAAGAGCGGAAACAAAGCTCTTGTAACTGCGTTCGGTGCAATGAGAATGATTGTAACTGTAGGCTGGCGATCTACCCA MVAATVFFFMERGTVNPAWKTSVTVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILVAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWRST ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTATTCTTCTTCATGGAGAGAGGTACTGTTAACCCT---GCGTGGAAAACATCAGTAACTGTTGCTGGTCTAGTAACTGGTATTGCTTTCATTCACTACATGTATATGAGAGAAGTATGGGTT------------------------------GCTACA---------------------GGTGACTCACCAACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGCTCACTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCG------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAGCTGCTGCTAAG------AGC---GGAAACAAAGCTCTT---GTA---ACT---GCG---TTC---GGT---GCAATG---AGAATGATTGTAACTGTA---------------------------------------------------------------GGCTGG---------CGATCTACC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERGTVNP-AWKTSVTVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILVA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---RST--------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_EU915740 [IV-Alpha8-18B2] PF75005_env_samples_EU915740 gi|229358362|gb|EU915740| Uncultured microorganism clone PF75005 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF75005 putative proteorhodopsin gene, partial cds EU915740 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGTTTTCTTCTTCATGGAGAGAGGTACTGTTAACCCTGCGTGGAAAACATCAGTAACTGTTGCTGGTCTAGTAACTGGTATTGCTTTCATTCACTACATGTATATGAGAGAAGTATGGGTTGCTACAGGTGACTCACCAACAGTATATAGATATATTGACTGGTTAATTACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCAGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAGCTGCTGCTAAGAGCGGAAACAAAGCTCTTGTAACTGCGTTCGGTGCAATGAGAATGATTGTAACTGTAGGTTGGGCCATATAT MVAATVFFFMERGTVNPAWKTSVTVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILVAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTTTTCTTCTTCATGGAGAGAGGTACTGTTAACCCT---GCGTGGAAAACATCAGTAACTGTTGCTGGTCTAGTAACTGGTATTGCTTTCATTCACTACATGTATATGAGAGAAGTATGGGTT------------------------------GCTACA---------------------GGTGACTCACCAACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCA---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAGCTGCTGCTAAG------AGC---GGAAACAAAGCTCTT---GTA---ACT---GCG---TTC---GGT---GCAATG---AGAATGATTGTAACTGTA---------------------------------------------------------------GGTTGG---------GCCATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERGTVNP-AWKTSVTVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILVA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_1105102577092 [IV-Alpha8-18B2] JCVI_ORF_1105102577092_GS022_Open_Ocean_2m jcvi|1105102577092| 1105102577092 JCVI ORF 1105102577092 1105102577092 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 20-janv-04 Open_Ocean/2m_depth/S_32.3_psu/GS022/250_miles_from_Panama_City/Eastern_Tropical_Pacific Pacific Ocean marine 6.492778 -82.90389 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TTGAGACTGTTTGCTCTAGCAGCTGTTGCCCTAACAGGTTTAACAGGAATTGCTAATGCAGCAAGCGCTACGATGTTAGCTCAGGATGACTTCGTTGGAATATCTTTTTGGATTATTTCAATGGGTATGTTAGCGGCTACAGCTTTCTTCTTCATGGAGAGAGGCACTGTTAACCCTGCGTGGAAAACATCAGTAACTGTTGCTGGTCTAGTAACTGGTATTGCTTTCATTCACTACATGTACATGAGAGAAGTATGGGTTGCTACAGGTGACTCACCAACAGTATATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCAGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAGCTGCTGCTAAGAGCGGAAACAAAGCTCTTGTAACTGCGTTCGGTGCAATGAGAATGATTGTAACTGTAGGTTGGGCAATTTATCCATTAGGTTATGTATTTGGTTACCTAACTGGTGGAGTAGATGCTGACACATTAAACGTAGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAATGAGTTCTGGAGCTGGCGCAAGAGCAAGA LRLFALAAVALTGLTGIANAASATMLAQDDFVGISFWIISMGMLAATAFFFMERGTVNPAWKTSVTVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILVAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDADTLNVVYNLADFINKIAFGLVIWAAAMSSGAGARAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGACTGTTTGCTCTAGCAGCTGTTGCCCTAACAGGTTTAACAGGAATTGCTAATGCAGCAAGCGCTACGATGTTAGCTCAGGATGACTTCGTTGGAATATCTTTTTGGATTATTTCAATGGGTATGTTAGCGGCTACAGCTTTCTTCTTCATGGAGAGAGGCACTGTTAACCCT---GCGTGGAAAACATCAGTAACTGTTGCTGGTCTAGTAACTGGTATTGCTTTCATTCACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACA---------------------GGTGACTCACCAACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCA---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAGCTGCTGCTAAG------AGC---GGAAACAAAGCTCTT---GTA---ACT---GCG---TTC---GGT---GCAATG---AGAATGATTGTAACTGTA---------------------------------------------------------------GGTTGG---------GCAATTTATCCATTAGGTTATGTATTTGGTTACCTA---------------------------------------ACTGGTGGAGTAGATGCTGACACATTAAACGTAGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAATGAGTTCTGGAGCTGGCGCAAGAGCAAGA--------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------LRLFALAAVALTGLTGIANAASATMLAQDDFVGISFWIISMGMLAATAFFFMERGTVNP-AWKTSVTVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILVA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDADTLNVVYNLADFINKIAFGLVIWAAAMSSGAGARAR----------------------------------- [IV-Alpha8-18B2]_1112732271921 [IV-Alpha8-18B2] JCVI_ORF_1112732271921_GS049_Coastal_2m jcvi|1112732271921| 1112732271921 JCVI ORF 1112732271921 1112732271921 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 17-MAY-2004 Coastal/2m_depth/S_32.6_psu/GS049/Moorea/Outside_Cooks_Bay/Polynesia_Archipelagos Pacific Ocean marine -17.453056 -149.79889 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAACTGTTTGCTCTAGCAGCTGTTGCCCTAACAGGTTTAACAGGAATTGCTAATGCAGCAGACGCAACGATGTTAGCTCAGGATGACTTTGTTGGAATATCTTTTTGGATTATTTCAATGGGTATGTTAGCGGCTACAGCTTTCTTTTTCATGGAGAGAGGTACTGTTAACCCTGCGTGGAAAACATCAGTAACTGTTGCTGGTCTAGTAACTGGTATTGCTTTCATTCACTACATGTACATGAGAGAAGTATGGGTTGCTACAGGTGACTCACCAACAGTATATAGATATATTGACTGGTTAATTACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCGGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAGCTGCTGCTAAGAGCGGAAACAAAGCTCTTGTAACTGCGTTCGGTGCAATGAGAATGATTGTAACTGTAGGTTGGGCAATTTATCCATTAGGTTACGTATTTGGTTACCTAACTGGTGGAGTAGATGCCGATACATTAAACGTAGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAAATGAGTTC MKKLKLFALAAVALTGLTGIANAADATMLAQDDFVGISFWIISMGMLAATAFFFMERGTVNPAWKTSVTVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILVAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDADTLNVVYNLADFINKIAFGLVIWAAANEF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAACTGTTTGCTCTAGCAGCTGTTGCCCTAACAGGTTTAACAGGAATTGCTAATGCAGCAGACGCAACGATGTTAGCTCAGGATGACTTTGTTGGAATATCTTTTTGGATTATTTCAATGGGTATGTTAGCGGCTACAGCTTTCTTTTTCATGGAGAGAGGTACTGTTAACCCT---GCGTGGAAAACATCAGTAACTGTTGCTGGTCTAGTAACTGGTATTGCTTTCATTCACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACA---------------------GGTGACTCACCAACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCG------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAGCTGCTGCTAAG------AGC---GGAAACAAAGCTCTT---GTA---ACT---GCG---TTC---GGT---GCAATG---AGAATGATTGTAACTGTA---------------------------------------------------------------GGTTGG---------GCAATTTATCCATTAGGTTACGTATTTGGTTACCTA---------------------------------------ACTGGTGGAGTAGATGCCGATACATTAAACGTAGTTTACAACTTAGCTGACTTCATTAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAAATGAGTTC------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------MKKLKLFALAAVALTGLTGIANAADATMLAQDDFVGISFWIISMGMLAATAFFFMERGTVNP-AWKTSVTVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILVA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDADTLNVVYNLADFINKIAFGLVIWAAANEF------------------------------------------ [IV-Alpha8-18B2]_DQ903147 [IV-Alpha8-18B2] clone_A1S0116_DQ903147 gi|116294023|gb|DQ903147| Uncultured bacterium clone A1S0116 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A1S0116 putative proteorhodopsin gene, partial cds. DQ903147 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na South China Sea surface water (SCS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na ATGGTTGCCGCTACTGTGTTCTTCTTCATGGAGAGAGGTACTGTTAACCCTGCGTGGAAAACATCAGTAACTGTTGCTGGTCTAGTAACTGGTATTGCTTTCATTCACTACATGTACATGAGAGAAGTATGGGTTGCTACAGGTGACTCACCAACAGTATATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGGTTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACGCTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAGCTGCTGCTAAGAGCGGAAACAAAGCTCTTGTAACTGCGTTCGGTGCAATGAGAATGATTGKAACTGTAGGGTGGGCCATTTATCCA MVAATVFFFMERGTVNPAWKTSVTVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILVAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMI?TVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTGTTCTTCTTCATGGAGAGAGGTACTGTTAACCCT---GCGTGGAAAACATCAGTAACTGTTGCTGGTCTAGTAACTGGTATTGCTTTCATTCACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACA---------------------GGTGACTCACCAACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGG---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACGCTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAGCTGCTGCTAAG------AGC---GGAAACAAAGCTCTT---GTA---ACT---GCG---TTC---GGT---GCAATG---AGAATGATT---ACTGTA---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERGTVNP-AWKTSVTVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILVA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMI-TV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_DQ903150 [IV-Alpha8-18B2] clone_A1S0119_DQ903150 gi|116294029|gb|DQ903150| Uncultured bacterium clone A1S0119 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A1S0119 putative proteorhodopsin gene, partial cds. DQ903150 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na South China Sea surface water (SCS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na ATGGTGGCCGCTACTGCGTTCTTCTTCATGGAGAGAGGTACTGTTAACCCTGCGTGGAAAACATCAGTAACTGTTGCTGGTCTAGTAACTGGTATTGCTTTCATTCACTACATGTACATGAGAGAAGTATGGGTTGCTACAGGTGACTCACCAACAGTATATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGTAGCTGTAAGAAAAGCAGACTCTGGAATGTTCAAGAGATTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAGCTGCTGCTAAGAGCGGAAACAAAGCTCTTGTAACTGCGTTCGGTGCAATGAGAATGATTGTAACTGTAGGCTGGGCAATATACCCA MVAATAFFFMERGTVNPAWKTSVTVAGLVTGIAFIHYMYMREVWVATGDSPTVYRYIDWLITVPLQMVEFYLILVAVRKADSGMFKRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCGTTCTTCTTCATGGAGAGAGGTACTGTTAACCCT---GCGTGGAAAACATCAGTAACTGTTGCTGGTCTAGTAACTGGTATTGCTTTCATTCACTACATGTACATGAGAGAAGTATGGGTT------------------------------GCTACA---------------------GGTGACTCACCAACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAGACTCT---GGAATG------------------------------------TTCAAGAGA---TTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAGCTGCTGCTAAG------AGC---GGAAACAAAGCTCTT---GTA---ACT---GCG---TTC---GGT---GCAATG---AGAATGATTGTAACTGTA---------------------------------------------------------------GGCTGG---------GCAATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMERGTVNP-AWKTSVTVAGLVTGIAFIHYMYMREVWV----------AT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILVA---V-RKADS-GM------------FKR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-b]_1105146485216 [IV-Alpha8-b] JCVI_ORF_1105146485216_GS027_Coastal_3m jcvi|1105146485216| 1105146485216 JCVI ORF 1105146485216 1105146485216 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/B subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 04-FEB-2004 Coastal/3m_depth/S_34.9_psu/GS027/Devils_Crown/Floreana_Island/Galapagos_Islands Pacific Ocean marine -1.2161111 -90.422775 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAACTGTTTGCCCTTACAGCTGTAGCCTTAGTAGGTATTACATCTGTAGCAAACGCTGCGACCGCGATGTTAGCTCAAGATGACTTTGTTGGAATTTCCTTTTGGGTAATTTCAATGGGTATGTTGGCTGCTACTGCATTCTTCTTCATGGAAAGAAGTTCTGTGGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCAGGTCTAGTAACTGGTATTGCTTTCATCCATTACATGTATATGAGAGATGTGTGGGTAACTACTGGCGATTCACCAACAGTATATAGATATATTGACTGGTTAATTACTGTTCCATTACAGATGATAGAATTTTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATTTTCTGGAGATTGTTAATCGGATCATTAGTAATGTTAATCGGAGGATATTTAGGAGAGGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGATGGGTATACATTCTTTATGAAATATTTTCAGGTGAAGCTGGAAAAGCTGCTGCTAAGAGTGGTAACAAATCTCTTGTAACTGCATTCAGTGCAATGAGAATGATTGTTACAGTAGGTTGGGCTATTTACCCATTAGGTTACGTATTTGGTTACCTAACAGGTGGTGTAGATGCTAACTCACTTAACGTTGTTTACAACTTAGCTGACTTTATAAACAAAATTGCTTTCGGTCTAGTAATCTGGGCTGCTGCAATTAGTTCAGCTGGTGCAAGAAGCAGA MKKLKLFALTAVALVGITSVANAATAMLAQDDFVGISFWVISMGMLAATAFFFMERSSVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAAAKSGNKSLVTAFSAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAAISSAGARSR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAACTGTTTGCCCTTACAGCTGTAGCCTTAGTAGGTATTACATCTGTAGCAAACGCTGCGACCGCG---ATGTTAGCTCAAGATGACTTTGTTGGAATTTCCTTTTGGGTAATTTCAATGGGTATGTTGGCTGCTACTGCATTCTTCTTCATGGAAAGAAGTTCTGTGGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCAGGTCTAGTAACTGGTATTGCTTTCATCCATTACATGTATATGAGAGATGTGTGGGTA------------------------------ACTACT---------------------GGCGATTCACCAACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTTCCATTACAGATGATAGAATTTTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATCGGATCATTAGTAATGTTAATCGGAGGATATTTAGGAGAG---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGATGGGTATACATTCTTTATGAAATA---------------TTT------TCA---GGTGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGTAACAAATCTCTT---GTA---ACT---GCA---TTC---AGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTACGTATTTGGTTACCTA---------------------------------------ACAGGTGGTGTAGATGCTAACTCACTTAACGTTGTTTACAACTTAGCTGACTTTATAAACAAAATTGCTTTCGGTCTAGTAATCTGGGCTGCTGCAATTAGTTCA---GCTGGTGCAAGAAGCAGA--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALTAVALVGITSVANAATA-MLAQDDFVGISFWVISMGMLAATAFFFMERSSVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKSL-V-T-A-F-S-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAAISS-AGARSR----------------------------------- [IV-Alpha8-b]_DQ927002 [IV-Alpha8-b] clone_PF91129_DQ927002 gi|116294119|gb|DQ927002| Uncultured bacterium clone PF91129 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF91129 putative proteorhodopsin gene, partial cds. DQ927002 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/B subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGGTAGCCGCTACTGTATTCTTCTTTATGGAAAGAAGCACTGTTGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCAGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGATGTATGGGTAAGTACAGGTGATTCACCAACAGTTTACAGATATATTGACTGGCTAATTACTGTGCCGTTACAGATGATGGAATTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAGCTCTGGTATTTTCTGGAGATTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTATAATCGGTATGGCAGGTTGGGTATACATACTTTATGAAGTATTCTCAGGTGAAGCCGGTAAAGCTGCTGCGAAAAGTGGTAATAAAGCTCTTGTCACTGCATTCAGTGCAATGAGAATGATCGTTACAGTTGGATGGGCTATCTACCCA MVAATVFFFMERSTVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVSTGDSPTVYRYIDWLITVPLQMMEFYLILVAVRKASSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFSAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTATTCTTCTTTATGGAAAGAAGCACTGTTGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCAGGTCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGATGTATGGGTA------------------------------AGTACA---------------------GGTGATTCACCAACAGTTTACAGATATATTGACTGG------------------------CTAATTACTGTGCCGTTACAGATGATGGAATTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAGCTCT---GGTATT------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTATAATCGGTATGGCAGGTTGGGTATACATACTTTATGAAGTA---------------TTC------TCA---GGTGAAGCCGGTAAAGCTGCTGCGAAA------AGT---GGTAATAAAGCTCTT---GTC---ACT---GCA---TTC---AGT---GCAATG---AGAATGATCGTTACAGTT---------------------------------------------------------------GGATGG---------GCTATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERSTVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------ST-------GDSPTVYRYIDW--------LITVPLQMMEFYLILVA---V-RKASS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-S-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-b]_EF088565 [IV-Alpha8-b] clone_AT37012_EF088565 gi|126843369|gb|EF088565| Uncultured bacterium clone AT37012 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT37012 putative proteorhodopsin gene, partial cds. EF088565 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/B subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na surface water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na TTGCTAGCCGCTACTGCATTCTTCTTCATGGAAAGAGGTTCTGTTGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGATGTATGGGTGACTACAGGCGATTCACCAACAGTATACAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAATTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCAGGAATATTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCCGCTTCAAAAAGTGGAAACAAAGCTCTTGTTACTGCATTCAGTGCAATGAGAATGATCGTTACAGTAGGCTGGGCAATCTACCCA LLAATAFFFMERGSVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEVFSGEAGKAASKSGNKALVTAFSAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTAGCCGCTACTGCATTCTTCTTCATGGAAAGAGGTTCTGTTGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGATGTATGGGTG------------------------------ACTACA---------------------GGCGATTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAATTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCA---GGAATA------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCCGCTTCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTC---AGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGCTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------LLAATAFFFMERGSVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-S-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-b]_EF079841 [IV-Alpha8-b] clone_ID11012_EF079841 gi|126361771|gb|EF079841| Uncultured bacterium clone ID11012 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID11012 putative proteorhodopsin gene, partial cds. EF079841 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/B subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na #na Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGCTAGCCGCTACTGTTTTCTTCTTCACGGAAAGAAGTTCTGTTGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCATTCATCCACTACATGTACATGAGAGATGTATGGGTAACTACTGGTGATTCACCAACAGTATATAGATATATTGACTGGTTAATTACTGTGCCACTACAGATGATAGAATTCTACTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATATTCTGGAGATTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCTTCAAAAAGTGGAAACAAAGCTCTTGTTACTGCATTCAGTGCAATGAGAATGATCGTTACAGTAGGTTGGGCCATATACCCA MLAATVFFFTERSSVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEVFSGEAGKAASKSGNKALVTAFSAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTAGCCGCTACTGTTTTCTTCTTCACGGAAAGAAGTTCTGTTGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCATTCATCCACTACATGTACATGAGAGATGTATGGGTA------------------------------ACTACT---------------------GGTGATTCACCAACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTGCCACTACAGATGATAGAATTCTACTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATA------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTTCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTC---AGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCCATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFTERSSVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-S-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-b]_1105133273794 [IV-Alpha8-b] JCVI_ORF_1105133273794_GS027_Coastal_3m jcvi|1105133273794| 1105133273794 JCVI ORF 1105133273794 1105133273794 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/B subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 04-FEB-2004 Coastal/3m_depth/S_34.9_psu/GS027/Devils_Crown/Floreana_Island/Galapagos_Islands Pacific Ocean marine -1.2161111 -90.422775 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAAATGTTTGCTCTTACAGCTGTTGCCCTAATGGGTGTTACAGGTGTAGCAAACGCTGAGACCGCGATGTTAGCTCAAGATGACTTTGTTGGAATTTCCTTTTGGGTAATTTCAATGGGTATGTTGGCTGCTACAGCATTCTTCTTCATGGAAAGAAGTTCTGTTGCACCTGGTTGGAAAACATCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGATGTATGGGTGACTACAGGCGATTCACCAACAGTATACAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAATTTTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATATTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCTTCAAAAAGTGGAAACAAAGCTCTTGTTACTGCATTCAGTGCAATGAGAATGATCGTTACAGTAGGTTGGGCAATTTACCCATTAGGTTACGTATTTGGTTACCTAACAGGTGGTGTAGATGCTAACTCGCTTAACGTTGTTTACAACTTAGCTGACTTTATAAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCCTCAGCCTTA MKKLKMFALTAVALMGVTGVANAETAMLAQDDFVGISFWVISMGMLAATAFFFMERSSVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEVFSGEAGKAASKSGNKALVTAFSAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAASAL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAAATGTTTGCTCTTACAGCTGTTGCCCTAATGGGTGTTACAGGTGTAGCAAACGCTGAGACCGCG---ATGTTAGCTCAAGATGACTTTGTTGGAATTTCCTTTTGGGTAATTTCAATGGGTATGTTGGCTGCTACAGCATTCTTCTTCATGGAAAGAAGTTCTGTTGCACCT---GGTTGGAAAACATCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGATGTATGGGTG------------------------------ACTACA---------------------GGCGATTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAATTTTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATA------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTTCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTC---AGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCATTAGGTTACGTATTTGGTTACCTA---------------------------------------ACAGGTGGTGTAGATGCTAACTCGCTTAACGTTGTTTACAACTTAGCTGACTTTATAAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCCTCAGCCTTA------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------MKKLKMFALTAVALMGVTGVANAETA-MLAQDDFVGISFWVISMGMLAATAFFFMERSSVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-S-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAASAL------------------------------------------ [IV-Alpha8-b]_EU915904 [IV-Alpha8-b] US120209_env_samples_EU915904 gi|229358690|gb|EU915904| Uncultured microorganism clone US120209 putative proteorhodopsin gene, partial cds Uncultured microorganism clone US120209 putative proteorhodopsin gene, partial cds EU915904 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/B subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_surface_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTAGCCGCTACTGTTTTCTTCTTCATGGAAAGAAGTTCTGTTGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCATTCATCCACTACATGTACATGAGAGATGTATGGGTGACTACAGGCGACTCACCAACAGTATACAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGTATTTTCTGGAGATTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAGGCTGGATACATCAACGCTACACTTGGTTTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCTTCAAAAAGTGGAAACAAAGCTCTTGTAACCGCATTTGGTGCAATGAGAATGATCGTTACAGTAGGTTGGGCCATTTAT MVAATVFFFMERSSVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTTTTCTTCTTCATGGAAAGAAGTTCTGTTGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCATTCATCCACTACATGTACATGAGAGATGTATGGGTG------------------------------ACTACA---------------------GGCGACTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGTATT------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAG---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTTCAAAA------AGT---GGAAACAAAGCTCTT---GTA---ACC---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCCATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERSSVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-b]_EF088576 [IV-Alpha8-b] clone_AT37028_EF088576 gi|126843391|gb|EF088576| Uncultured bacterium clone AT37028 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT37028 putative proteorhodopsin gene, partial cds. EF088576 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/B subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na surface water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGCTGGCCGCTACTGCCTTCTTCTTCATGGAAAGAAGTTCTGTTGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCATTCATCCACTACATGTACATGAGAGATGTATGGGTGACTACAGGCGATTCACCAACAGTATACAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGTATCTTCTGGAGATTGTTGATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCATCTAAGAGTGGAAACAAGGCTCTAGTGACAGCCTTCGGTGCAATGAGAATGATTGTAACTGTAGGATGGGCCATCTATCCA MLAATAFFFMERSSVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGCCTTCTTCTTCATGGAAAGAAGTTCTGTTGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCATTCATCCACTACATGTACATGAGAGATGTATGGGTG------------------------------ACTACA---------------------GGCGATTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGTATC------------------------------------TTCTGGAGA---TTGTTGATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCATCTAAG------AGT---GGAAACAAGGCTCTA---GTG---ACA---GCC---TTC---GGT---GCAATG---AGAATGATTGTAACTGTA---------------------------------------------------------------GGATGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFMERSSVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-b]_1105120414456 [IV-Alpha8-b] JCVI_ORF_1105120414456_GS035_Coastal_2m jcvi|1105120414456| 1105120414456 JCVI ORF 1105120414456 1105120414456 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/B subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 01-mars-04 Coastal/2m_depth/S_34.5_psu/GS035/Wolf_Island/Galapagos_Islands Pacific Ocean marine 1.3891667 -91.81695 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAACTGTTTGCTCTTACAGCTGTTGCCCTAATGGGTGTTACAGGTGTAGCAAACGCTGAGACCGCGATGTTAGCTCAAGATGACTTTGTTGGAATTTCCTTTTGGGTAATTTCAATGGGTATGTTGGCTGCTACAGCATTCTTCTTCATGGAAAGAAGTTCTGTTGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGATGTATGGGTGACTACAGGCGATTCACCAACAGTATACAGATATATTGACTGGTTAATTACTGTGCCACTACAGATGATAGAGTTCTATTTAATTCTAGTAGCTGTAAGAATAGCAGAGTCTGGTATTTTCTGGAGATTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCTTCAAAAAGTGGAAACAAAGCTCTTGTTACCGCGTTTGGTGCAATGAGAATGATTGTTACAGTAGGTTGGGCTATTTACCCATTAGGTTACGTATTTGGTTACCTAACTGGTGGTGTAGATGCTAACTCACTTAACGTTGTTTACAACTTAGCTGACTTTATAAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAATTAGTTCAGCTGGTGCAAGAAGCAGA MKKLKLFALTAVALMGVTGVANAETAMLAQDDFVGISFWVISMGMLAATAFFFMERSSVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRIAESGIFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAAISSAGARSR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAACTGTTTGCTCTTACAGCTGTTGCCCTAATGGGTGTTACAGGTGTAGCAAACGCTGAGACCGCG---ATGTTAGCTCAAGATGACTTTGTTGGAATTTCCTTTTGGGTAATTTCAATGGGTATGTTGGCTGCTACAGCATTCTTCTTCATGGAAAGAAGTTCTGTTGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGATGTATGGGTG------------------------------ACTACA---------------------GGCGATTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACTGTGCCACTACAGATGATAGAGTTCTATTTAATTCTAGTAGCT---------GTA---AGAATAGCAGAGTCT---GGTATT------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTTCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACC---GCG---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTACGTATTTGGTTACCTA---------------------------------------ACTGGTGGTGTAGATGCTAACTCACTTAACGTTGTTTACAACTTAGCTGACTTTATAAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAATTAGTTCA---GCTGGTGCAAGAAGCAGA--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALTAVALMGVTGVANAETA-MLAQDDFVGISFWVISMGMLAATAFFFMERSSVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RIAES-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAAISS-AGARSR----------------------------------- [IV-Alpha8-b]_KJ926167 [IV-Alpha8-b] RHOMEO_AG_OTU11 gb|KJ926167| Uncultured bacterium cloneRHOMEO AG OTU11 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU11 putative proteorhodopsin gene, partial cds KJ926167 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/B subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGTTAATTACTGTGCCATTACAGATGATAGAATTTTATTTAATTCTAGTAGCTGTAAGAAAAGCAAATTCTGGAATTTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGACACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTGTTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCGGGTGAAGCTGGTAAAGCTGCTTCTAAAAGTGGAAACAAAGCTCTTGTTACTGCGTTTAGTGCGATGAGAATGATTGTTACAGTA WLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGHLGEAGYINATLGFVIGMAGWVYILYEVFSGEAGKAASKSGNKALVTAFSAMRMIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATTACTGTGCCATTACAGATGATAGAATTTTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAATTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGACACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCG---GGTGAAGCTGGTAAAGCTGCTTCTAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCG---TTT---AGT---GCGATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGHLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-S-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-b]_1105091959220 [IV-Alpha8-b] JCVI_ORF_1105091959220_GS028_Coastal_2m jcvi|1105091959220| 1105091959220 JCVI ORF 1105091959220 1105091959220 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/B subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 04-FEB-2004 Coastal/2m_depth/S_n.a/GS028/Coastal_Floreana/Galapagos_Islands Pacific Ocean marine -1.2169445 -90.319725 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAACTGTTTGCTCTTACAGCTGTTGCCCTAATGGGTGTTACAGGTGTAGCAAACGCTGAGACCGCGATGTTAGCTCAAGATGACTTCGTTGGAATTTCCTTTTGGGTAATTTCAATGGGTATGTTGGCTGCTACAGCATTCTTCTTCATGGAAAGAAGTTCTGTTGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCTTTTATCCATTACATGTACATGAGAGATGTATGGGTAAGTACTGGCGATTCACCAACAGTATACAGATATATTGATTGGTTAATTACTGTGCCATTACAGATGATAGAATTTTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATTTTCTGGAGATTGTTAATTGGTTCATTAGTAATGTTAATCGGAGGATATCTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGAAAAGCTGCTTCTAAAAGTGGAAACAAAGCTCTTGTTACTGCATTTAGTGCAATGAGAATGATTGTTACAGTTGGTTGGGCTATTTACCCATTAGGTTACGTATTCGGTTACCTAACAGGTGGTGTAGATGCTAACTCACTTAACGTTGTTTACAACTTAGCTGACTTCATAAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAATTAGTCAGCTGGTGCAAGAAGCAGATACTCTACAGCCG MKKLKLFALTAVALMGVTGVANAETAMLAQDDFVGISFWVISMGMLAATAFFFMERSSVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVSTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAASKSGNKALVTAFSAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAAISQLVQEADTLQP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAACTGTTTGCTCTTACAGCTGTTGCCCTAATGGGTGTTACAGGTGTAGCAAACGCTGAGACCGCG---ATGTTAGCTCAAGATGACTTCGTTGGAATTTCCTTTTGGGTAATTTCAATGGGTATGTTGGCTGCTACAGCATTCTTCTTCATGGAAAGAAGTTCTGTTGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCTTTTATCCATTACATGTACATGAGAGATGTATGGGTA------------------------------AGTACT---------------------GGCGATTCACCAACAGTATACAGATATATTGATTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAATTTTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGTTAATCGGAGGATATCTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCTTCTAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---AGT---GCAATG---AGAATGATTGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTACGTATTCGGTTACCTA---------------------------------------ACAGGTGGTGTAGATGCTAACTCACTTAACGTTGTTTACAACTTAGCTGACTTCATAAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAATTAGTCAG---CTGGTGCAAGAAGCAGATACTCTACAGCCG--------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALTAVALMGVTGVANAETA-MLAQDDFVGISFWVISMGMLAATAFFFMERSSVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------ST-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-S-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAAISQ-LVQEADTLQP------------------------------- [IV-Alpha8-b]_1105090880214 [IV-Alpha8-b] JCVI_ORF_1105090880214_GS030_Warm_Seep_19m jcvi|1105090880214| 1105090880214 JCVI ORF 1105090880214 1105090880214 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/B subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 09-FEB-2004 Warm_Seep/19m_depth/S_n.a/GS030/Warm_seep/Roca_Redonda/Galapagos_Islands Red Sea marine 0.27222222 -91.63333 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCTCTTACAGTTGTTGCCCTTATGGGTGCTTCTGGAGTTGCAAACGCTGAGACCGCGATGTTAGCTCAAGATGACTTTGTTGGAATTTCCTTTTGGGTAATTTCAATGGGTATGTTGGCTGCTACAGCATTCTTCTTCATGGAAAGAAGTTCTGTTGCTCCTGGTTGGAAAACATCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCATTCATCCACTACATGTACATGAGAGATGTATGGGTGACTACAGGCGATTCACCAACAGTATACAGATATATTGACTGGTTAATTACTGTGCCACTACAGATGATAGAGTTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATTTTCTGGAGATTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCTTCAAAAAGTGGAAACAAAGCTCTTGTTACGGCATTTGGCGCAATGAGAATGATTGTTACTGTAGGTTGGGCTATTTACCCATTAGGTTACGTATTTGGTTACCTAACAGGTGGTGTAGATGCTAACTCACTTAACGTTGTTTACAACTTAGCTGACTTTATAAACAAAATTGCTTTCGGTCTAGTAATCTGGGCTGCTGCAATTAGTTCAGCTGGTGCAAGAAGCAGA MKKLKLFALTVVALMGASGVANAETAMLAQDDFVGISFWVISMGMLAATAFFFMERSSVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAAISSAGARSR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCTCTTACAGTTGTTGCCCTTATGGGTGCTTCTGGAGTTGCAAACGCTGAGACCGCG---ATGTTAGCTCAAGATGACTTTGTTGGAATTTCCTTTTGGGTAATTTCAATGGGTATGTTGGCTGCTACAGCATTCTTCTTCATGGAAAGAAGTTCTGTTGCTCCT---GGTTGGAAAACATCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCATTCATCCACTACATGTACATGAGAGATGTATGGGTG------------------------------ACTACA---------------------GGCGATTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACTGTGCCACTACAGATGATAGAGTTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTTCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACG---GCA---TTT---GGC---GCAATG---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTACGTATTTGGTTACCTA---------------------------------------ACAGGTGGTGTAGATGCTAACTCACTTAACGTTGTTTACAACTTAGCTGACTTTATAAACAAAATTGCTTTCGGTCTAGTAATCTGGGCTGCTGCAATTAGTTCA---GCTGGTGCAAGAAGCAGA--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALTVVALMGASGVANAETA-MLAQDDFVGISFWVISMGMLAATAFFFMERSSVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAAISS-AGARSR----------------------------------- [IV-Alpha8-b]_1105154513456 [IV-Alpha8-b] JCVI_ORF_1105154513456_GS030_Warm_Seep_19m jcvi|1105154513456| 1105154513456 JCVI ORF 1105154513456 1105154513456 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/B subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 09-FEB-2004 Warm_Seep/19m_depth/S_n.a/GS030/Warm_seep/Roca_Redonda/Galapagos_Islands Red Sea marine 0.27222222 -91.63333 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCTCTTACAGTTGTTGCCCTTATGGGTGCTTCTGGAGTTGCAAACGCTGAGACCGCGATGTTAGCTCAAGATGACTTTGTTGGAATTTCCTTTTGGGTAATTTCAATGGGTATGTTGGCTGCTACAGCATTCTTCTTCATGGAAAGAAGTTCTGTTGCTCCTGGTTGGAAAACATCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCATTCATCCACTACATGTACATGAGAGATGTATGGGTGACTACAGGCGATTCACCAACAGTATACAGATATATTGACTGGTTAATTACTGTGCCACTACAGATGATAGAGTTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATTTTCTGGAGATTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCTTCAAAAAGTGGAAACAAAGCTCTTGTTACGGCATTTGGCGCAATGAGAATGATTGTTACTGTAGGTTGGGCTATTTACCCATTACGTTACGTATTTGGTTACCTAACAGGTGGTGTAGATGCTAACTCACTTAACGTTGTTTACAACTTAGCTGACTTTATAAACAAAATTGCTTTCGGTCTAGTAATCTGGGCTGCTGCAATTAGTTCAGCTGGTGCAAGAAGCAGA MKKLKLFALTVVALMGASGVANAETAMLAQDDFVGISFWVISMGMLAATAFFFMERSSVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTVGWAIYPLRYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAAISSAGARSR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCTCTTACAGTTGTTGCCCTTATGGGTGCTTCTGGAGTTGCAAACGCTGAGACCGCG---ATGTTAGCTCAAGATGACTTTGTTGGAATTTCCTTTTGGGTAATTTCAATGGGTATGTTGGCTGCTACAGCATTCTTCTTCATGGAAAGAAGTTCTGTTGCTCCT---GGTTGGAAAACATCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCATTCATCCACTACATGTACATGAGAGATGTATGGGTG------------------------------ACTACA---------------------GGCGATTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACTGTGCCACTACAGATGATAGAGTTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTTCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACG---GCA---TTT---GGC---GCAATG---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTACGTTACGTATTTGGTTACCTA---------------------------------------ACAGGTGGTGTAGATGCTAACTCACTTAACGTTGTTTACAACTTAGCTGACTTTATAAACAAAATTGCTTTCGGTCTAGTAATCTGGGCTGCTGCAATTAGTTCA---GCTGGTGCAAGAAGCAGA--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALTVVALMGASGVANAETA-MLAQDDFVGISFWVISMGMLAATAFFFMERSSVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLRYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAAISS-AGARSR----------------------------------- [IV-Alpha8-b]_1105088937062 [IV-Alpha8-b] JCVI_ORF_1105088937062_GS027_Coastal_3m jcvi|1105088937062| 1105088937062 JCVI ORF 1105088937062 1105088937062 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/B subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 04-FEB-2004 Coastal/3m_depth/S_34.9_psu/GS027/Devils_Crown/Floreana_Island/Galapagos_Islands Pacific Ocean marine -1.2161111 -90.422775 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCTCTTGCAGCTGTTGCCCTAATGGGTGTTACAGGTGTAGCAAACGCTGAGACCGCGATGTTAGCTCAAGATGACTTTGTTGGGATTTCCTTTTGGGTAATTTCAATGGGTATGTTGGCTGCTACAGCTTTCTTCTTCATGGAAAGAAGTTCTGTTGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTTATCCATTACATGTACATGAGAGATGTATGGGTGACTACAGGCGATTCACCAACAGTATACAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAATTCTACTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGTATTTTCTGGAGATTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCATCTAAGAGTGGAAACAAAGCTCTTGTCACTGCATTTAGTGCAATGAGAATGATTGTTACAGTAGGTTGGGCTATTTACCCATTAGGTTACGTATTTGGTTACCTAACAGGTGGTGTAGATGCTAACTCACTTAACGTTGTTTACAACTTAGCTGACTTTATAAACAAGATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAATAAGTTCAGCTGGTGCTAGAGCAAGA MKKLKLFALAAVALMGVTGVANAETAMLAQDDFVGISFWVISMGMLAATAFFFMERSSVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAASKSGNKALVTAFSAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAAISSAGARAR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCTCTTGCAGCTGTTGCCCTAATGGGTGTTACAGGTGTAGCAAACGCTGAGACCGCG---ATGTTAGCTCAAGATGACTTTGTTGGGATTTCCTTTTGGGTAATTTCAATGGGTATGTTGGCTGCTACAGCTTTCTTCTTCATGGAAAGAAGTTCTGTTGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCTGGTCTTGTAACTGGTATTGCATTTATCCATTACATGTACATGAGAGATGTATGGGTG------------------------------ACTACA---------------------GGCGATTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAATTCTACTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGTATT------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCATCTAAG------AGT---GGAAACAAAGCTCTT---GTC---ACT---GCA---TTT---AGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTACGTATTTGGTTACCTA---------------------------------------ACAGGTGGTGTAGATGCTAACTCACTTAACGTTGTTTACAACTTAGCTGACTTTATAAACAAGATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAATAAGTTCA---GCTGGTGCTAGAGCAAGA--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALAAVALMGVTGVANAETA-MLAQDDFVGISFWVISMGMLAATAFFFMERSSVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-S-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAAISS-AGARAR----------------------------------- [IV-Alpha8-b]_1105079940162 [IV-Alpha8-b] JCVI_ORF_1105079940162_GS014_Coastal_1m jcvi|1105079940162| 1105079940162 JCVI ORF 1105079940162 1105079940162 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/B subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 20-DEC-2003 Coastal/1m_depth/S_n.a/GS014/South_of_Charleston/SC/North_American_East_Coast Atlantic Ocean marine 32.506943 -79.263885 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf GTGAGTTGTTTCATGAAAAAACTGAAACTGTTTGCTCTTACAGCTGTTGCCCTAATGGGTGTTACAGGTGTAGCAAACGCTGAGACCGCGATGTTAGCTCAAGATGACTTTGTTGGAATTTCCTTTTGGGTAATTTCAATGGGTATGTTGGCTGCTACAGCATTCTTCTTCACGGAAAGAAGTTCTGTTGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGATGTATGGGTGACTACAGGCGATTCACCAACAGTATACAGATATATTGACTGGTTAATTACTGTGCCACTACAGATGATAGAGTTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGTATTTTCTGGAGATTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCTTCAAAAAGTGGAAACAAAGCTCTTGTTACCGCGTTTGGTGCAATGAGAATGATTGTTACAGTAGGTTGGGCTATTTACCCATTAGGTTACGTATTTGGTTACCTAACTGGTGGTGTAGATGCTAACTCACTTAACGTTGTTTACAACCTAGCTGACTTTATAAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAATTAGTTCAGCTGGTGCAAGAAGCAGA VSCFMKKLKLFALTAVALMGVTGVANAETAMLAQDDFVGISFWVISMGMLAATAFFFTERSSVAPGWKTSVTVAGLVTGIAFIHYMYMRDVWVTTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAAISSAGARSR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGAGTTGTTTCATGAAAAAACTGAAACTGTTTGCTCTTACAGCTGTTGCCCTAATGGGTGTTACAGGTGTAGCAAACGCTGAGACCGCG---ATGTTAGCTCAAGATGACTTTGTTGGAATTTCCTTTTGGGTAATTTCAATGGGTATGTTGGCTGCTACAGCATTCTTCTTCACGGAAAGAAGTTCTGTTGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGATGTATGGGTG------------------------------ACTACA---------------------GGCGATTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACTGTGCCACTACAGATGATAGAGTTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGTATT------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTTCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACC---GCG---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTACGTATTTGGTTACCTA---------------------------------------ACTGGTGGTGTAGATGCTAACTCACTTAACGTTGTTTACAACCTAGCTGACTTTATAAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAATTAGTTCA---GCTGGTGCAAGAAGCAGA--------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------VSCFMKKLKLFALTAVALMGVTGVANAETA-MLAQDDFVGISFWVISMGMLAATAFFFTERSSVAP-GWKTSVTVAGLVTGIAFIHYMYMRDVWV----------TT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAAISS-AGARSR----------------------------------- [IV-Alpha8-a]_DQ903120 [IV-Alpha8-a] clone_A1S0006_DQ903120 gi|116293969|gb|DQ903120| Uncultured bacterium clone A1S0006 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A1S0006 putative proteorhodopsin gene, partial cds. DQ903120 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/A subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na South China Sea surface water (SCS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na ATGGTCGCCGCTTCTGCATTCTTCTTCATGGAGAGAAACACTGTTGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCAGGGCTAGTAACTGGTATTGCATTCATCCACTACATGTACATGAGAGAAGTGTGGGTGATGACTGGCGATTCTCCAACAGTATATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAATTCTGGAATTTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCCTCAAAAAGTGGAAACAAGGCTCTTGTTACTGCTTTTGGTGCGATGAGAATGATTGTTACAGTAGGGTGGGCAATCTACCCA MVAASAFFFMERNTVAPGWKTSVTVAGLVTGIAFIHYMYMREVWVMTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAASKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCCGCTTCTGCATTCTTCTTCATGGAGAGAAACACTGTTGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCAGGGCTAGTAACTGGTATTGCATTCATCCACTACATGTACATGAGAGAAGTGTGGGTG------------------------------ATGACT---------------------GGCGATTCTCCAACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAATTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCCTCAAAA------AGT---GGAAACAAGGCTCTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGGTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAASAFFFMERNTVAP-GWKTSVTVAGLVTGIAFIHYMYMREVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-a]_DQ903124 [IV-Alpha8-a] clone_A1S0014_DQ903124 gi|116293977|gb|DQ903124| Uncultured bacterium clone A1S0014 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A1S0014 putative proteorhodopsin gene, partial cds. DQ903124 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/A subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na South China Sea surface water (SCS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na ATGGTCGCCGCTACTGCATTCTTCTTCATGGAGAGAAACACTGTTGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCAGGGCTAGTAACTGGTATTGCATTCATCCACTACATGTACATGAGAGAAGTGTGGGTGATGACTGGCGATTCTCCAACAGTATATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAATTCTGGAATTTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCCTCAAAAAGTGGAAACAAGGCTCTTGTTACTGCTTTTGGTGCGATGAGAATGATTGTTACAGTAGGGTGGGCAATCTACCCA MVAATAFFFMERNTVAPGWKTSVTVAGLVTGIAFIHYMYMREVWVMTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAASKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCCGCTACTGCATTCTTCTTCATGGAGAGAAACACTGTTGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCAGGGCTAGTAACTGGTATTGCATTCATCCACTACATGTACATGAGAGAAGTGTGGGTG------------------------------ATGACT---------------------GGCGATTCTCCAACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAATTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCCTCAAAA------AGT---GGAAACAAGGCTCTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGGTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMERNTVAP-GWKTSVTVAGLVTGIAFIHYMYMREVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-a]_EF079844 [IV-Alpha8-a] clone_ID11015_EF079844 gi|126361777|gb|EF079844| Uncultured bacterium clone ID11015 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID11015 putative proteorhodopsin gene, partial cds. EF079844 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/A subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na #na Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGGTCGCCGCTACTGTGTTCTTCTTCATGGAGAGAAACACTGTTGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCAGGGCTAGTAACTGGTATTGCATTCATCCACTACATGTACATGAGAGAAGTGTGGGTGATGACTGGCGATTCACCAACAGTATATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAATTCTGGAATTTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCTTCAAAAAGTGGAAACAAGGCTCTTGTTACCGCTTTTGGTGCGATGAGAATGATTGTTACAGTAGGTTGGGCCATCTATCCA MVAATVFFFMERNTVAPGWKTSVTVAGLVTGIAFIHYMYMREVWVMTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAASKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCCGCTACTGTGTTCTTCTTCATGGAGAGAAACACTGTTGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCAGGGCTAGTAACTGGTATTGCATTCATCCACTACATGTACATGAGAGAAGTGTGGGTG------------------------------ATGACT---------------------GGCGATTCACCAACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAATTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTTCAAAA------AGT---GGAAACAAGGCTCTT---GTT---ACC---GCT---TTT---GGT---GCGATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERNTVAP-GWKTSVTVAGLVTGIAFIHYMYMREVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-a]_1105155376342 [IV-Alpha8-a] JCVI_ORF_1105155376342_GS051_Coral_Reef_Atoll_1m jcvi|1105155376342| 1105155376342 JCVI ORF 1105155376342 1105155376342 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/A subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 22-MAY-2004 Coral_Reef_Atoll/1m_depth/S_34.2_psu/GS051/Rangirora_Atoll/Polynesia_Archipelagos Pacific Ocean marine -15.143611 -147.435 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCTCTAACTGTTGCAGCATTGATTGGTGTGACTGGTGTAGCAAACGCAGCTTCTGCTACGATGTTAGCTCAAGATGACTTCGTTGGAATATCTTTCTGGATAATCTCAATGGGTATGTTGGCTGCTACAGCGTTCTTCTTCATGGAGAGAAACACTGTTGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCAGGGCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTGATGACTGGCGACTCACCAACAGTATATAGATATATTGATTGGTTAATTACTGTGCCATTACAGATGATAGAATTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAATTCTGGAATTTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTGATCGGTGGATATTTAGGAGAGGCTGGATATATCAACGCTACACTTGGTTTCATAATCGGTATGGCAGGTTGGGTATACATCCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCTTCAAAAAGTGGAAACAAGGCTCTTGTTACTGCTTTTGGTGCGATGAGAATGATTGTTACAGTAGGTTGGGCAATTTACCCATTAGGTTACGTATTTGGTTACTTAACAGGTGGTGTAGATGCTAACTCGCTTAACGTTGTTTACAACTTAGCTGACTTTATAAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAGTGAGTTCAGCTGGCGCAAGAAGCAGA MKKLKLFALTVAALIGVTGVANAASATMLAQDDFVGISFWIISMGMLAATAFFFMERNTVAPGWKTSVTVAGLVTGIAFIHYMYMREVWVMTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAASKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAAVSSAGARSR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCTCTAACTGTTGCAGCATTGATTGGTGTGACTGGTGTAGCAAACGCAGCTTCTGCTACGATGTTAGCTCAAGATGACTTCGTTGGAATATCTTTCTGGATAATCTCAATGGGTATGTTGGCTGCTACAGCGTTCTTCTTCATGGAGAGAAACACTGTTGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCAGGGCTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGAAGTATGGGTG------------------------------ATGACT---------------------GGCGACTCACCAACAGTATATAGATATATTGATTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAATTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAATTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTGATCGGTGGATATTTAGGAGAG---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCAGGTTGGGTATACATCCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTTCAAAA------AGT---GGAAACAAGGCTCTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCATTAGGTTACGTATTTGGTTACTTA---------------------------------------ACAGGTGGTGTAGATGCTAACTCGCTTAACGTTGTTTACAACTTAGCTGACTTTATAAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAGTGAGTTCA---GCTGGCGCAAGAAGCAGA--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALTVAALIGVTGVANAASATMLAQDDFVGISFWIISMGMLAATAFFFMERNTVAP-GWKTSVTVAGLVTGIAFIHYMYMREVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAAVSS-AGARSR----------------------------------- [IV-Alpha8-a]_1105153452796 [IV-Alpha8-a] JCVI_ORF_1105153452796_GS018_Open_Ocean_2m jcvi|1105153452796| 1105153452796 JCVI ORF 1105153452796 1105153452796 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/A subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 10-janv-04 Open_Ocean/2m_depth/S_35.4_psu/GS018/Rosario_Bank/Caribbean_Sea Caribbean Sea marine 18.036667 -83.78472 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCTCTTACTGTTGCAGCATTAATTGGTGTGACTGGTGTAGCAAACGCAGCATCTGCTACAATGTTAGCTCAAGATGACTTCGTTGGGATATCTTTTTGGATAATCTCAATGGGTATGTTGGCTGCTACAGCGTTCTTCTTTATGGAGAGAAACACTGTTGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCTTTCATTCATTACATGTACATGAGAGAAGTATGGGTAATGACTGGCGATTCACCAACAGTATATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAATTTTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATTTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCGTAATCGGTATGGCTGGATGGATCTACATTCTTTATGAAATATTCTCAGGTGAAGCTGGAAAAGCTGCTGCTAAGAGCGGAAACAAAGCTCTAGTAACTGCGTTCGGTGCGATGAGAATGATCGTAACAGTTGGTTGGGCTATTTACCCATTAGGTTACATTTTTGGTTACCTAACAGGTGGAGTAGACGCTAACTCATTAAACGTAGTATACAACTTAGCTGACTTTATAAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAGTAAGTTCAGCTGGTGCAAGAAGCAGA MKKLKLFALTVAALIGVTGVANAASATMLAQDDFVGISFWIISMGMLAATAFFFMERNTVAPGWKTSVTVAGLVTGIAFIHYMYMREVWVMTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAAVSSAGARSR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCTCTTACTGTTGCAGCATTAATTGGTGTGACTGGTGTAGCAAACGCAGCATCTGCTACAATGTTAGCTCAAGATGACTTCGTTGGGATATCTTTTTGGATAATCTCAATGGGTATGTTGGCTGCTACAGCGTTCTTCTTTATGGAGAGAAACACTGTTGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCTTTCATTCATTACATGTACATGAGAGAAGTATGGGTA------------------------------ATGACT---------------------GGCGATTCACCAACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAATTTTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCGTAATCGGTATGGCTGGATGGATCTACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCTGCTAAG------AGC---GGAAACAAAGCTCTA---GTA---ACT---GCG---TTC---GGT---GCGATG---AGAATGATCGTAACAGTT---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTACATTTTTGGTTACCTA---------------------------------------ACAGGTGGAGTAGACGCTAACTCATTAAACGTAGTATACAACTTAGCTGACTTTATAAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAGTAAGTTCA---GCTGGTGCAAGAAGCAGA--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALTVAALIGVTGVANAASATMLAQDDFVGISFWIISMGMLAATAFFFMERNTVAP-GWKTSVTVAGLVTGIAFIHYMYMREVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAAVSS-AGARSR----------------------------------- [IV-Alpha8-a]_DQ887786 [IV-Alpha8-a] clone_PF10010_DQ887786 gi|116294272|gb|DQ887786| Uncultured bacterium clone PF10010 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF10010 putative proteorhodopsin gene, partial cds. DQ887786 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/A subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2007 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGGTCGCCGCTACTGTATTCTTCTTTATGGAGAGAAACACTGTTGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCTTTCATTCATTACATGTACATGAGAGAAGTATGGGTAATGACTGGCGATTCACCAACAGTATATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAATTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATTTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCGTAATCGGTATGGCTGGATGGATCTACATTCTTTACGAAATATTCTCAGGTGAAGCTGGAAAAGCTGCTGCTAAGAGCGGAAATAAAGCTCTAGTAACTGCGTTCGGTGCGATGAGAATGATCGTAACAGTTGGCTGGGCGATTTACCCA MVAATVFFFMERNTVAPGWKTSVTVAGLVTGIAFIHYMYMREVWVMTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCCGCTACTGTATTCTTCTTTATGGAGAGAAACACTGTTGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCTTTCATTCATTACATGTACATGAGAGAAGTATGGGTA------------------------------ATGACT---------------------GGCGATTCACCAACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAATTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCGTAATCGGTATGGCTGGATGGATCTACATTCTTTACGAAATA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCTGCTAAG------AGC---GGAAATAAAGCTCTA---GTA---ACT---GCG---TTC---GGT---GCGATG---AGAATGATCGTAACAGTT---------------------------------------------------------------GGCTGG---------GCGATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERNTVAP-GWKTSVTVAGLVTGIAFIHYMYMREVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-a]_1105141354732 [IV-Alpha8-a] JCVI_ORF_1105141354732_GS035_Coastal_2m jcvi|1105141354732| 1105141354732 JCVI ORF 1105141354732 1105141354732 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/A subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 01-mars-04 Coastal/2m_depth/S_34.5_psu/GS035/Wolf_Island/Galapagos_Islands Pacific Ocean marine 1.3891667 -91.81695 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCTCTTACTGTTGCAGCATTAATTGGTGTGACTGGTGTAGCAAACGCAGCTTCTGCTACGATGTTAGCTCAAGATGACTTCGTTGGAATATCTTTCTGGATAATTTCAATGGGTATGTTGGCTGCTACAGCGTTCTTCTTCATGGAGAGAAACACTGTTGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCAGGGCTAGTAACTGGTATTGCATTCATCCACTACATGTACATGAGAGAAGTATGGGTGATGACAGGCGATTCACCAACAGTATATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAATTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAATTCTGGAATTTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCTGCTAAAAGCGGAAATAAAGCTCTAGTAACTGCGTTCAGTGCAATGAGAATGATTGTAACTGTAGGTTGGGCTATTTACCCATTACGTTATGTATTTGGTTACCTAACAGGTGGAGTAGATGCTAACTCATTAAACGTAGTTTACAACTTAGCTGACTTTATTAACAAAATTGCATTTCGGTCTAGTAATCTGGGCTGCTGCAGTAAGTTCAGCTGGCGC MKKLKLFALTVAALIGVTGVANAASATMLAQDDFVGISFWIISMGMLAATAFFFMERNTVAPGWKTSVTVAGLVTGIAFIHYMYMREVWVMTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEIFSGEAGKAAAKSGNKALVTAFSAMRMIVTVGWAIYPLRYVFGYLTGGVDANSLNVVYNLADFINKIAFRSSNLGCCSKFSWR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCTCTTACTGTTGCAGCATTAATTGGTGTGACTGGTGTAGCAAACGCAGCTTCTGCTACGATGTTAGCTCAAGATGACTTCGTTGGAATATCTTTCTGGATAATTTCAATGGGTATGTTGGCTGCTACAGCGTTCTTCTTCATGGAGAGAAACACTGTTGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCAGGGCTAGTAACTGGTATTGCATTCATCCACTACATGTACATGAGAGAAGTATGGGTG------------------------------ATGACA---------------------GGCGATTCACCAACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAATTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAATTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTGCTAAA------AGC---GGAAATAAAGCTCTA---GTA---ACT---GCG---TTC---AGT---GCAATG---AGAATGATTGTAACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTACGTTATGTATTTGGTTACCTA---------------------------------------ACAGGTGGAGTAGATGCTAACTCATTAAACGTAGTTTACAACTTAGCTGACTTTATTAACAAAATTGCATTTCGGTCTAGTAATCTGGGCTGCTGCAGTAAGTTC---AGCTGGCGC------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------MKKLKLFALTVAALIGVTGVANAASATMLAQDDFVGISFWIISMGMLAATAFFFMERNTVAP-GWKTSVTVAGLVTGIAFIHYMYMREVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-S-AM-RMIVTV---------------------GW---AIYPLRYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFRSSNLGCCSKF-SWR-------------------------------------- [IV-Alpha8-a]_1105156096498 [IV-Alpha8-a] JCVI_ORF_1105156096498_GS051_Coral_Reef_Atoll_1m jcvi|1105156096498| 1105156096498 JCVI ORF 1105156096498 1105156096498 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/A subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 22-MAY-2004 Coral_Reef_Atoll/1m_depth/S_34.2_psu/GS051/Rangirora_Atoll/Polynesia_Archipelagos Pacific Ocean marine -15.143611 -147.435 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCTCTTACTGTTGCAGCATTGATTGGTGTGACTGGTGTAGCAAACGCAGCTTCTGCTACGATGTTAGCTCAAGATGACTTCGTTGGAATATCTTTCTGGATAATTTCAATGGGTATGTTGGCTGCTACAGCGTTCTTCTTCATGGAGAGAAACACTGTTGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCAGGGCTAGTAACTGGTATTGCATTCATCCACTACATGTACATGAGAGAAGTATGGGTGATGACTGGCGATTCACCAACAGTATATAGATATATTGACTGGTTAATTACTGTGCCACTACAGATGATAGAGTTCTACTTAATTCTAGTAGCTGTAAGAAAAGCAAATTCTGGAATTTTCTGGAGATTGTTAATCGGATCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCTGCTAAGAGCGGAAATAAAGCTCTAGTAACTGCGTTCAGTGCAATGAGAATGATTGTAACTGTAGGTTGGGCTATTTACCCATTAGGTTATGTATTTGGTTACCTAACAGGTGGTGTAGATGCTAACTCATTAAACGTAGTTTACAACTTAGCTGACTTTATAAATAAAATTGCATTTGGTCTAGTAATTTGGGCTGCTGCAGTAAGTTCAGCTGGTGCAAGAAGCAGA MKKLKLFALTVAALIGVTGVANAASATMLAQDDFVGISFWIISMGMLAATAFFFMERNTVAPGWKTSVTVAGLVTGIAFIHYMYMREVWVMTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEIFSGEAGKAAAKSGNKALVTAFSAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAAVSSAGARSR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCTCTTACTGTTGCAGCATTGATTGGTGTGACTGGTGTAGCAAACGCAGCTTCTGCTACGATGTTAGCTCAAGATGACTTCGTTGGAATATCTTTCTGGATAATTTCAATGGGTATGTTGGCTGCTACAGCGTTCTTCTTCATGGAGAGAAACACTGTTGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCAGGGCTAGTAACTGGTATTGCATTCATCCACTACATGTACATGAGAGAAGTATGGGTG------------------------------ATGACT---------------------GGCGATTCACCAACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTGCCACTACAGATGATAGAGTTCTACTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAATTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATCGGATCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTGCTAAG------AGC---GGAAATAAAGCTCTA---GTA---ACT---GCG---TTC---AGT---GCAATG---AGAATGATTGTAACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTATGTATTTGGTTACCTA---------------------------------------ACAGGTGGTGTAGATGCTAACTCATTAAACGTAGTTTACAACTTAGCTGACTTTATAAATAAAATTGCATTTGGTCTAGTAATTTGGGCTGCTGCAGTAAGTTCA---GCTGGTGCAAGAAGCAGA--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALTVAALIGVTGVANAASATMLAQDDFVGISFWIISMGMLAATAFFFMERNTVAP-GWKTSVTVAGLVTGIAFIHYMYMREVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-S-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAAVSS-AGARSR----------------------------------- [IV-Alpha8-a]_EF100806 [IV-Alpha8-a] clone_ID29033_EF100806 gi|126513391|gb|EF100806| Uncultured bacterium clone ID29033 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID29033 putative proteorhodopsin gene, partial cds. EF100806 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/A subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-nov-07 #na surface water Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGGTGGCCGCTACTGCGTTCTTCTTCATGGAGAGAAACACTGTTGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCAGGGCTAGTAACTGGTATTGCATTCATCCACTACATGTACATGAGAGAAGTATGGGTGATGACTGGCGATTCACCAACAGTATATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGTAGCTGTAAGAAAAGCAAATTCTGGAATTTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTGTACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCTGCTAAGAGCGGAAATAAAGCTCTAGTAACTGCGTTCAGTGCAATGAGAATGATTGTGACTGTAGGTTGGGCAATTTATCCA MVAATAFFFMERNTVAPGWKTSVTVAGLVTGIAFIHYMYMREVWVMTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAAAKSGNKALVTAFSAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCGTTCTTCTTCATGGAGAGAAACACTGTTGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCAGGGCTAGTAACTGGTATTGCATTCATCCACTACATGTACATGAGAGAAGTATGGGTG------------------------------ATGACT---------------------GGCGATTCACCAACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAATTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTGTACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTGCTAAG------AGC---GGAAATAAAGCTCTA---GTA---ACT---GCG---TTC---AGT---GCAATG---AGAATGATTGTGACTGTA---------------------------------------------------------------GGTTGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMERNTVAP-GWKTSVTVAGLVTGIAFIHYMYMREVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-S-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-a]_1105091612714 [IV-Alpha8-a] JCVI_ORF_1105091612714_GS029_Coastal_3m jcvi|1105091612714| 1105091612714 JCVI ORF 1105091612714 1105091612714 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/A subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 08-FEB-2004 Coastal/3m_depth/S_34.5_psu/GS029/North_James_Bay/Santigo_Island/Galapagos_Islands Pacific Ocean marine -0.2 -90.83528 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TTGTTTGCTTTAGCTGTTGCAGCATTGATTGGTGTGACTGGCGTAGCAAACGCAGCTTCTGCTACGATGTTAGCTCAAGATGACTTCGTTGGAATATCTTTCTGGATAATTTCAATGGGTATGTTGGCTGCTACAGCGTTCTTCTTCATGGAGAGAAACACTGTTGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCAGGGCTAGTAACTGGTATTGCATTCATCCACTACATGTACATGAGAGAAGTATGGGTGATGACTGGCGATTCACCAACAGTATACAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAATTCTGGAATTTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCGTAATCGGTATGGCTGGATGGATCTACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCTGCTAAGAGCGGAAACAAAGCTCTAGTGACTGCGTTCAGTGCAATGAGAATGATTGTAACTGTAGGTTGGGCTATTTACCCATTAGGTTATGTATTTGGTTACCTAACAGGTGGTGTAGATGCTAACTCATTAAACGTAGTTTACAACTTAGCTGACTTTATAAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAGTAAGTTCAGCTGGCGCAAGAAGCAGA LFALAVAALIGVTGVANAASATMLAQDDFVGISFWIISMGMLAATAFFFMERNTVAPGWKTSVTVAGLVTGIAFIHYMYMREVWVMTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFSAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAAVSSAGARSR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTTGCTTTAGCTGTTGCAGCATTGATTGGTGTGACTGGCGTAGCAAACGCAGCTTCTGCTACGATGTTAGCTCAAGATGACTTCGTTGGAATATCTTTCTGGATAATTTCAATGGGTATGTTGGCTGCTACAGCGTTCTTCTTCATGGAGAGAAACACTGTTGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCAGGGCTAGTAACTGGTATTGCATTCATCCACTACATGTACATGAGAGAAGTATGGGTG------------------------------ATGACT---------------------GGCGATTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAATTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCGTAATCGGTATGGCTGGATGGATCTACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTGCTAAG------AGC---GGAAACAAAGCTCTA---GTG---ACT---GCG---TTC---AGT---GCAATG---AGAATGATTGTAACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTATGTATTTGGTTACCTA---------------------------------------ACAGGTGGTGTAGATGCTAACTCATTAAACGTAGTTTACAACTTAGCTGACTTTATAAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAGTAAGTTCA---GCTGGCGCAAGAAGCAGA--------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------LFALAVAALIGVTGVANAASATMLAQDDFVGISFWIISMGMLAATAFFFMERNTVAP-GWKTSVTVAGLVTGIAFIHYMYMREVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-S-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAAVSS-AGARSR----------------------------------- [IV-Alpha8-a]_1112726788391 [IV-Alpha8-a] JCVI_ORF_1112726788391 jcvi|1112726788391| 1112726788391 JCVI ORF 1112726788391 1112726788391 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/A subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 12-sept-05 Harbor/2m_depth/S_n.a/GS149/West_coast_Zanzibar_[Tanzania)/harbour_region/Indian_Ocean Indian Ocean marine -6.116667 39.116665 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCTTTAGCTGTTGCAGCATTGATTGGTGTGACTGGCGTAGCAAACGCAGCTTCTGCTACGATGTTAGCTCAAGATGACTTCGTTGGAATATCTTTCTGGATAATTTCAATGGGTATGTTGGCTGCTACAGCGTTCTTCTTCATGGAGAGAAACACTGTTGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCAGGGCTAGTAACTGGTATTGCATTCATCCACTACATGTACATGAGAGAAGTATGGGTGATGACTGGCGATTCACCAACAGTATACAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAATTCTGGAATTTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCGTAATCGGTATGGCTGGATGGATCTACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCTGCTAAGAGCGGAAACAAAGCTCTAGTAACTGCGTTCAGTGCAATGAGAATGATTGTAACTGTAGGTTGGGCTATTTACCCATTAGGTTATGTATTTGGTTACCTAACAGGTGGTGTAGATGCTAACTCGTTAAACGTAGTTTACAACTTAGCTGACTTTATAAACAAAATTGCATTT MKKLKLFALAVAALIGVTGVANAASATMLAQDDFVGISFWIISMGMLAATAFFFMERNTVAPGWKTSVTVAGLVTGIAFIHYMYMREVWVMTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFSAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVVYNLADFINKIAF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCTTTAGCTGTTGCAGCATTGATTGGTGTGACTGGCGTAGCAAACGCAGCTTCTGCTACGATGTTAGCTCAAGATGACTTCGTTGGAATATCTTTCTGGATAATTTCAATGGGTATGTTGGCTGCTACAGCGTTCTTCTTCATGGAGAGAAACACTGTTGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCAGGGCTAGTAACTGGTATTGCATTCATCCACTACATGTACATGAGAGAAGTATGGGTG------------------------------ATGACT---------------------GGCGATTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAATTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCGTAATCGGTATGGCTGGATGGATCTACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTGCTAAG------AGC---GGAAACAAAGCTCTA---GTA---ACT---GCG---TTC---AGT---GCAATG---AGAATGATTGTAACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTATGTATTTGGTTACCTA---------------------------------------ACAGGTGGTGTAGATGCTAACTCGTTAAACGTAGTTTACAACTTAGCTGACTTTATAAACAAAATTGCATTT--------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALAVAALIGVTGVANAASATMLAQDDFVGISFWIISMGMLAATAFFFMERNTVAP-GWKTSVTVAGLVTGIAFIHYMYMREVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-S-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVVYNLADFINKIAF----------------------------------------------------- [IV-Alpha8-a]_1105154902460 [IV-Alpha8-a] JCVI_ORF_1105154902460_GS047_Open_Ocean_30m jcvi|1105154902460| 1105154902460 JCVI ORF 1105154902460 1105154902460 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/A subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 28-mars-04 Open_Ocean/30m_depth/S_37.3_psu/GS047/201_miles_from_F._Polynesia/Tropical_South_Pacific Pacific Ocean marine -10.131389 -135.44945 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAACTGTTTGCTCTAACTGTTGCAGCATTGATTGGTGTGACTGGTGTAGCAAACGCAGCTTCTGCTACTATGTTAGCTCAAGATGACTTCGTTGGGATATCTTTTTGGATAATTTCAATGGGTATGTTGGCTGCTACAGCGTTTTTCTTCATGGAGAGAAATACTGTTGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCAGGGCTAGTAACTGGTATTGCATTCATCCACTATATGTACATGAGAGAAGTATGGGTGATGACTGGCGATTCACCAACAGTATACAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATTTTCTGGAGATTGTTAATTGGATCACTAGTAATGTTAATCGGTGGATACCTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCTGCTAAGAGCGGAAACAAAGCTCTAGTAACTGCGTTCGGTGCAATGAGAATGATTGTAACTGTTGGTTGGGCTATTTACCCATTAGGTTATGTATTTGGTTACCTAACAGGTGGTGTAGATGCTAACTCATTAAACGTAGTTTACAACTTAGCTGACTTTATAAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAGTAAGTCAGCCGTTACAGCCT MKKLKLFALTVAALIGVTGVANAASATMLAQDDFVGISFWIISMGMLAATAFFFMERNTVAPGWKTSVTVAGLVTGIAFIHYMYMREVWVMTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAAVSQPLQP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAACTGTTTGCTCTAACTGTTGCAGCATTGATTGGTGTGACTGGTGTAGCAAACGCAGCTTCTGCTACTATGTTAGCTCAAGATGACTTCGTTGGGATATCTTTTTGGATAATTTCAATGGGTATGTTGGCTGCTACAGCGTTTTTCTTCATGGAGAGAAATACTGTTGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCAGGGCTAGTAACTGGTATTGCATTCATCCACTATATGTACATGAGAGAAGTATGGGTG------------------------------ATGACT---------------------GGCGATTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGATCACTAGTAATGTTAATCGGTGGATACCTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCTGCTAAG------AGC---GGAAACAAAGCTCTA---GTA---ACT---GCG---TTC---GGT---GCAATG---AGAATGATTGTAACTGTT---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTATGTATTTGGTTACCTA---------------------------------------ACAGGTGGTGTAGATGCTAACTCATTAAACGTAGTTTACAACTTAGCTGACTTTATAAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAGTAAGTCAG---CCGTTACAGCCT--------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALTVAALIGVTGVANAASATMLAQDDFVGISFWIISMGMLAATAFFFMERNTVAP-GWKTSVTVAGLVTGIAFIHYMYMREVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAAVSQ-PLQP------------------------------------- [IV-Alpha8-a]_1105079839968 [IV-Alpha8-a] JCVI_ORF_1105079839968_GS051_Coral_Reef_Atoll_1m jcvi|1105079839968| 1105079839968 JCVI ORF 1105079839968 1105079839968 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/A subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 22-MAY-2004 Coral_Reef_Atoll/1m_depth/S_34.2_psu/GS051/Rangirora_Atoll/Polynesia_Archipelagos Pacific Ocean marine -15.143611 -147.435 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCTCTAACTGTTGCAGCATTGATTGGTGTGACTGGTGTAGCAAACGCAGCTTCTGCTACGATGTTAGCTCAAGATGACTTCGTTGGAATATCTTTTTGGATAATTTCAATGGGTATGTTGGCTGCTACAGCGTTCTTCTTCATGGAGAGAAACACTGTTGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCAGGGCTAGTAACTGGTATTGCATTCATCCACTACATGTACATGAGAGAAGTATGGGTGATGACTGGCGATTCACCAACAGTATATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAGTTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATTTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAATGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCTGCTAAGAGTGGAAACAAAGCTCTAGTAACTGCGTTCGGTGCAATGAGAATGATTGTAACTGTAGGTTGGGCTATTTACCCATTAGGTTATGTATTTGGTTACCTAACACGTGGTGTAGATGCTAACTCATTAAACGTAGTTTACAACTTAGCTGACTTTATAAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAGTAAGTTCAGCTGGCGCAAGAAGCAGA MKKLKLFALTVAALIGVTGVANAASATMLAQDDFVGISFWIISMGMLAATAFFFMERNTVAPGWKTSVTVAGLVTGIAFIHYMYMREVWVMTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTRGVDANSLNVVYNLADFINKIAFGLVIWAAAVSSAGARSR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCTCTAACTGTTGCAGCATTGATTGGTGTGACTGGTGTAGCAAACGCAGCTTCTGCTACGATGTTAGCTCAAGATGACTTCGTTGGAATATCTTTTTGGATAATTTCAATGGGTATGTTGGCTGCTACAGCGTTCTTCTTCATGGAGAGAAACACTGTTGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCAGGGCTAGTAACTGGTATTGCATTCATCCACTACATGTACATGAGAGAAGTATGGGTG------------------------------ATGACT---------------------GGCGATTCACCAACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCTCTA---GTA---ACT---GCG---TTC---GGT---GCAATG---AGAATGATTGTAACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTATGTATTTGGTTACCTA---------------------------------------ACACGTGGTGTAGATGCTAACTCATTAAACGTAGTTTACAACTTAGCTGACTTTATAAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAGTAAGTTCA---GCTGGCGCAAGAAGCAGA--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALTVAALIGVTGVANAASATMLAQDDFVGISFWIISMGMLAATAFFFMERNTVAP-GWKTSVTVAGLVTGIAFIHYMYMREVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TRGVDANSLNVVYNLADFINKIAFGLVIWAAAVSS-AGARSR----------------------------------- [IV-Alpha8-a]_EU224307 [IV-Alpha8-a] clone_1812209_EU224307 gi|164698786|gb|EU224307| Uncultured bacterium clone 1812209 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 1812209 putative proteorhodopsin gene, partial cds. EU224307 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/A subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2008 #na surface water sample Indian Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGCTGGCCGCTACTGTTTTCTTCTTCATGGAAAGAAACACTGTTGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCAGGGCTAGTAACTGGTATTGCATTCATCCACTATATGTACATGAGAGAAGTATGGGTGATGACTGGCGATTCACCAACAGTATATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAATTCTACTTAATTCTAGTAGCTGTAAGAAAAGCAAATTCTGGAATTTTCTGGAGATTGTTAATTGGTTCATTGGTAATGTTAATCGGGGGATATTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCTGCTAAGAGCGGTAACAAAGCTCTAGTAACTGCGTTCGGTGCAATGAGAATGATTGTAACCGTAGGCTGGGCTATTTACCCA MLAATVFFFMERNTVAPGWKTSVTVAGLVTGIAFIHYMYMREVWVMTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGTTTTCTTCTTCATGGAAAGAAACACTGTTGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCAGGGCTAGTAACTGGTATTGCATTCATCCACTATATGTACATGAGAGAAGTATGGGTG------------------------------ATGACT---------------------GGCGATTCACCAACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAATTCTACTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAATTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTGGTAATGTTAATCGGGGGATATTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTGCTAAG------AGC---GGTAACAAAGCTCTA---GTA---ACT---GCG---TTC---GGT---GCAATG---AGAATGATTGTAACCGTA---------------------------------------------------------------GGCTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFMERNTVAP-GWKTSVTVAGLVTGIAFIHYMYMREVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-a]_EU224296 [IV-Alpha8-a] clone_1812229_EU224296 gi|164698764|gb|EU224296| Uncultured bacterium clone 1812229 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 1812229 putative proteorhodopsin gene, partial cds. EU224296 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/A subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2008 #na surface water sample Indian Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGCTGGCCGCTACTGTTTTCTTCTTCATGGAAAGAAACACTGTTGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCAGGGCTAGTAACTGGTATTGCATTCATCCACTATATGTACATGAGAGAAGTATGGGTGATGACTGGCGATTCACCAACAGTATATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAATTCTACTTAATTCTAGTAGCTGTAAGAAAAGCAAATTCTGGAATTTTCTGGAGATTGTTAATTGGTTCATTGGTAATGTTAATCGGGGGATATTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCTGCTAAGAGCGGTAACAAAGCTCTAGTAACTGCGTTCGGTGCAATGAGAATGATTGTAACCGTAGGCTGGGCTATTTACCCA MLAATVFFFMERNTVAPGWKTSVTVAGLVTGIAFIHYMYMREVWVMTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGTTTTCTTCTTCATGGAAAGAAACACTGTTGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCAGGGCTAGTAACTGGTATTGCATTCATCCACTATATGTACATGAGAGAAGTATGGGTG------------------------------ATGACT---------------------GGCGATTCACCAACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAATTCTACTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAATTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTGGTAATGTTAATCGGGGGATATTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTGCTAAG------AGC---GGTAACAAAGCTCTA---GTA---ACT---GCG---TTC---GGT---GCAATG---AGAATGATTGTAACCGTA---------------------------------------------------------------GGCTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFMERNTVAP-GWKTSVTVAGLVTGIAFIHYMYMREVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-a]_EU224291 [IV-Alpha8-a] clone_1812224_EU224291 gi|164698754|gb|EU224291| Uncultured bacterium clone 1812224 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 1812224 putative proteorhodopsin gene, partial cds. EU224291 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/A subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2008 #na surface water sample Indian Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGCTGGCCGCTACTGTTTTCTTCTTCATGGAAAGAAACACTGTTGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCAGGGCTAGTAACTGGTATTGCATTCATCCACTATATGTACATGAGAGAAGTATGGGTGATGACTGGCGATTCACCAACAGTATATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAATTCTACTTAATTCTAGTAGCTGTAAGAAAAGCAAATTCTGGAATTTTCTGGAGATTGTTAATTGGTTCATTGGTAATGTTAATCGGGGGATATTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCTGCTAAGAGCGGTAACAAAGCTCTAGTAACTGCGTTCGGTGCAATGAGAATGATTGTAACCGTAGGCTGGGCTATTTACCCA MLAATVFFFMERNTVAPGWKTSVTVAGLVTGIAFIHYMYMREVWVMTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGTTTTCTTCTTCATGGAAAGAAACACTGTTGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCAGGGCTAGTAACTGGTATTGCATTCATCCACTATATGTACATGAGAGAAGTATGGGTG------------------------------ATGACT---------------------GGCGATTCACCAACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAATTCTACTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAATTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTGGTAATGTTAATCGGGGGATATTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTGCTAAG------AGC---GGTAACAAAGCTCTA---GTA---ACT---GCG---TTC---GGT---GCAATG---AGAATGATTGTAACCGTA---------------------------------------------------------------GGCTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFMERNTVAP-GWKTSVTVAGLVTGIAFIHYMYMREVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-a]_1105111097746 [IV-Alpha8-a] JCVI_ORF_1105111097746_GS047_Open_Ocean_30m jcvi|1105111097746| 1105111097746 JCVI ORF 1105111097746 1105111097746 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/A subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 28-mars-04 Open_Ocean/30m_depth/S_37.3_psu/GS047/201_miles_from_F._Polynesia/Tropical_South_Pacific Pacific Ocean marine -10.131389 -135.44945 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAACTGTTTGCTCTTACAGCTGTTGCCTTATTAGGTGTAACTGGAATTGCAAACGCAGCATCTGCTACAATGTTAGCTCAAGATGACTTCGTTGGAATATCTTTCTGGATAATTTCAATGGGTATGTTGGCTGCTACAGCATTCTTTTTTATGGAAAGAAATACTGTTGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGAGAAGTATGGGTGATGACTGGTGATTCACCAACAGTATACAGATATATTGACTGGTTAATTACTGTGCCACTACAGATGATAGAATTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAATTCTGGAATTTTCTGGAGATTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAGGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCTGCTAAAAGCGGAAACAAAGCTTTAGTGACTGCATTCAGTGCAATGAGAATGATTGTTACTGTAGGTTGGGCTATTTACCCATTAGGTTATGTATTTGGTTACCTAACAGGTGGTGTAGATGCTAACTCACTAAACGTTGTTTACAACTTAGCTGACTTTATAAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAGTAAGTTCAGCTGGTGCTAGAAGCAGA MKKLKLFALTAVALLGVTGIANAASATMLAQDDFVGISFWIISMGMLAATAFFFMERNTVAPGWKTSVTVAGLVTGIAFIHYMYMREVWVMTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAAAKSGNKALVTAFSAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAAVSSAGARSR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAACTGTTTGCTCTTACAGCTGTTGCCTTATTAGGTGTAACTGGAATTGCAAACGCAGCATCTGCTACAATGTTAGCTCAAGATGACTTCGTTGGAATATCTTTCTGGATAATTTCAATGGGTATGTTGGCTGCTACAGCATTCTTTTTTATGGAAAGAAATACTGTTGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGAGAAGTATGGGTG------------------------------ATGACT---------------------GGTGATTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACTGTGCCACTACAGATGATAGAATTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAATTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAG---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTGCTAAA------AGC---GGAAACAAAGCTTTA---GTG---ACT---GCA---TTC---AGT---GCAATG---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTATGTATTTGGTTACCTA---------------------------------------ACAGGTGGTGTAGATGCTAACTCACTAAACGTTGTTTACAACTTAGCTGACTTTATAAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAGTAAGTTCA---GCTGGTGCTAGAAGCAGA--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALTAVALLGVTGIANAASATMLAQDDFVGISFWIISMGMLAATAFFFMERNTVAP-GWKTSVTVAGLVTGIAFIHYMYMREVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-S-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAAVSS-AGARSR----------------------------------- [IV-Alpha8-a]_1105128603104 [IV-Alpha8-a] JCVI_ORF_1105128603104_GS034_Coastal_3m jcvi|1105128603104| 1105128603104 JCVI ORF 1105128603104 1105128603104 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/A subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 19-FEB-2004 Coastal/3m_depth/S_n.a/GS034/North_Seamore_Island/Galapagos_Islands North Sea marine -0.38305557 -90.279724 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TTGTTTGCTCTTACAGCTGTTGCCCTATTGGGAATTACAGGTGTAGCAAACGCAGCTTCTGCTACTATGTTAGCTCAAGATGACTTCGTTGGGATATCTTTCTGGATAATTTCAATGGGTATGTTGGCTGCTACAGCGTTTTTCTTTATGGAGAGAAATACTGTTGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCAGGGCTAGTAACTGGTATTGCATTCATCCACTATATGTACATGAGAGAAGTATGGGTGATGACTGGCGATTCACCAACAGTATACAGATATATTGACTGGTTAATTACTGTACCATTACAGATGATAGAGTTTTATTTAATTCTAGTAGCTGTAAGAAAAGCAAATTCTGGAATCTTCTGGAGATTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCTCTAGTGACTGCGTTCGGTGCAATGAGAATGATTGTAACTGTAGGTTGGGCAATTTACCCATTAGGTTATGTATTTGGTTACCTAACAGGTGGTGTAGATGCAAACTCGTTAAACGTAGTTTACAACTTAGCTGACTTTATAAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAGTAAGTTCAGCTGGTGCAAGAAGCAGA LFALTAVALLGITGVANAASATMLAQDDFVGISFWIISMGMLAATAFFFMERNTVAPGWKTSVTVAGLVTGIAFIHYMYMREVWVMTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAAVSSAGARSR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTTGCTCTTACAGCTGTTGCCCTATTGGGAATTACAGGTGTAGCAAACGCAGCTTCTGCTACTATGTTAGCTCAAGATGACTTCGTTGGGATATCTTTCTGGATAATTTCAATGGGTATGTTGGCTGCTACAGCGTTTTTCTTTATGGAGAGAAATACTGTTGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCAGGGCTAGTAACTGGTATTGCATTCATCCACTATATGTACATGAGAGAAGTATGGGTG------------------------------ATGACT---------------------GGCGATTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACTGTACCATTACAGATGATAGAGTTTTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAATTCT---GGAATC------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCTCTA---GTG---ACT---GCG---TTC---GGT---GCAATG---AGAATGATTGTAACTGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCATTAGGTTATGTATTTGGTTACCTA---------------------------------------ACAGGTGGTGTAGATGCAAACTCGTTAAACGTAGTTTACAACTTAGCTGACTTTATAAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAGTAAGTTCA---GCTGGTGCAAGAAGCAGA--------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------LFALTAVALLGITGVANAASATMLAQDDFVGISFWIISMGMLAATAFFFMERNTVAP-GWKTSVTVAGLVTGIAFIHYMYMREVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAAVSS-AGARSR----------------------------------- [IV-Alpha8-a]_1105149995810 [IV-Alpha8-a] JCVI_ORF_1105149995810_GS028_Coastal_2m jcvi|1105149995810| 1105149995810 JCVI ORF 1105149995810 1105149995810 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/A subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 04-FEB-2004 Coastal/2m_depth/S_n.a/GS028/Coastal_Floreana/Galapagos_Islands Pacific Ocean marine -1.2169445 -90.319725 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCTCTTACAGCTGTTGCCCTATTGGGAATTACAGGTGTAGCAAACGCAGCTTCTGCTACTATGTTAGCTCAAGATGACTTCGTTGGAATATCTTTCTGGATAATTTCAATGGGTATGTTGGCTGCTACAGCATTTTTCTTTATGGAGAGAAATACTGTTGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCAGGGCTAGTAACTGGTATTGCATTCATCCACTATATGTACATGAGAGAAGTATGGGTGATGACTGGCGATTCACCAACAGTATACAGATATATTGACTGGTTAATTACTGTACCACTACAGATGATAGAGTTTTACTTAATTCTAGTAGCTGTAAGAAAAGCAAATTCTGGAATCTTCTGGAGATTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGAAAAGCTGCTGCTAAGAGCGGAAATAAAGCTCTAGTGACTGCGTTTGGTGCAATGAGAATGATTGTAACTGTAGGTTGGGCTATTTACCCATTAGGTTATGTATTTGGTTACCTAACAGGTGGTGTAGATGCAAACTCATTAAACGTAGTTTACAACTTAGCTGACTTTATAAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAGTAAGTTCAGCTGGTGCAAGAAGCAGA MKKLKLFALTAVALLGITGVANAASATMLAQDDFVGISFWIISMGMLAATAFFFMERNTVAPGWKTSVTVAGLVTGIAFIHYMYMREVWVMTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAAVSSAGARSR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCTCTTACAGCTGTTGCCCTATTGGGAATTACAGGTGTAGCAAACGCAGCTTCTGCTACTATGTTAGCTCAAGATGACTTCGTTGGAATATCTTTCTGGATAATTTCAATGGGTATGTTGGCTGCTACAGCATTTTTCTTTATGGAGAGAAATACTGTTGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCAGGGCTAGTAACTGGTATTGCATTCATCCACTATATGTACATGAGAGAAGTATGGGTG------------------------------ATGACT---------------------GGCGATTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACTGTACCACTACAGATGATAGAGTTTTACTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAATTCT---GGAATC------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCTGCTAAG------AGC---GGAAATAAAGCTCTA---GTG---ACT---GCG---TTT---GGT---GCAATG---AGAATGATTGTAACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTATGTATTTGGTTACCTA---------------------------------------ACAGGTGGTGTAGATGCAAACTCATTAAACGTAGTTTACAACTTAGCTGACTTTATAAACAAAATTGCATTTGGTCTAGTAATCTGGGCTGCTGCAGTAAGTTCA---GCTGGTGCAAGAAGCAGA--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALTAVALLGITGVANAASATMLAQDDFVGISFWIISMGMLAATAFFFMERNTVAP-GWKTSVTVAGLVTGIAFIHYMYMREVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAAVSS-AGARSR----------------------------------- [IV-Alpha8-a]_DQ422659 [IV-Alpha8-a] clone_med-tb04-20m-c12_DQ422659 gi|90024838|gb|DQ422659| Uncultured bacterium clone med-tb04-20m-c12 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-c12 putative proteorhodopsin gene, partial cds. DQ422659 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/A subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACAGTTCCACTACAGATGATTGAATTCTACTTAATTCTAGTCGCTGTAAGAAAAGCAAGCTCTGGAATTTTCTGGAGATTGTTAATTGGAACACTTGTAATGTTAATCGGAGGATACTTAGGAGAAGCTGGATACATTAACGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGATCTACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGTTGCTGCTAAGAGTGGAAACAAAGCTCTAGTAACTGCATTTGGTGCAATGAGAATGATTGTAACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQMIEFYLILVAVRKASSGIFWRLLIGTLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKVAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTTCCACTACAGATGATTGAATTCTACTTAATTCTAGTCGCT---------GTA---AGAAAAGCAAGCTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGAACACTTGTAATGTTAATCGGAGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGATCTACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGTTGCTGCTAAG------AGT---GGAAACAAAGCTCTA---GTA---ACT---GCA---TTT---GGT---GCAATG---AGAATGATTGTAACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILVA---V-RKASS-GI------------FWR-LLIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-a]_DQ203471 [IV-Alpha8-a] medHO10F10_env_samples_DQ203471 gi|77547390|gb|DQ203471| Uncultured bacterium clone medHO10F10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10F10 predicted proteorhodopsin gene, partial cds DQ203471 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/A subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGACTGGTTAATTACAGTTCCATTACAGATGATTGAATTCTACTTAATTCTAGTCGCTGTAAGAAAAGCAAGCTCTGGAATTTTCTGGAGATTGTTAATTGGATCACTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATTAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGATCTATATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCTTCTAAGAGTGGAAACAAAGCTCTAGTAACTGCATTTGGTGCAATGAGAATGATTGTAACTGTAGGTTGGGCAATCTACCCA SYIDWLITVPLQMIEFYLILVAVRKASSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAASKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGACTGG------------------------TTAATTACAGTTCCATTACAGATGATTGAATTCTACTTAATTCTAGTCGCT---------GTA---AGAAAAGCAAGCTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGATCACTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGATCTATATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTTCTAAG------AGT---GGAAACAAAGCTCTA---GTA---ACT---GCA---TTT---GGT---GCAATG---AGAATGATTGTAACTGTA---------------------------------------------------------------GGTTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQMIEFYLILVA---V-RKASS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-a]_DQ203472 [IV-Alpha8-a] medHO10F11_env_samples_DQ203472 gi|77547392|gb|DQ203472| Uncultured bacterium clone medHO10F11 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10F11 predicted proteorhodopsin gene, partial cds DQ203472 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/A subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGACTGGTTAATTACAGTTCCATTACAGATGATTGAATTCTACTTAATTCTAGTCGCTGTAAGAAAAGCAAGCTCTGGAATTTTCTGGAGATTGTTAATTGGATCACTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATTAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGATCTATATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCTTCTAAGAGTGGAAACAAAGCTCTAGTAACTGCATTTGGTGCAATGAGAATGATTGTAACTGTAGGTTGGGCAATCTACCCA SYIDWLITVPLQMIEFYLILVAVRKASSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAASKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGACTGG------------------------TTAATTACAGTTCCATTACAGATGATTGAATTCTACTTAATTCTAGTCGCT---------GTA---AGAAAAGCAAGCTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGATCACTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGATCTATATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTTCTAAG------AGT---GGAAACAAAGCTCTA---GTA---ACT---GCA---TTT---GGT---GCAATG---AGAATGATTGTAACTGTA---------------------------------------------------------------GGTTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQMIEFYLILVA---V-RKASS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-a]_DQ422189 [IV-Alpha8-a] clone_med-0m-d2_DQ422189 gi|90023898|gb|DQ422189| Uncultured bacterium clone med-0m-d2 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-d2 putative proteorhodopsin gene, partial cds. DQ422189 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/A subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATTACAGTTCCATTACAGATGATAGAATTCTATTTAATTCTAACAGCTGTAAGAAAAGCAAGCTCTGGAATTTTCTGGAGATTGTTAATTGGTACACTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATTAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTATTTTCAGGTGAAGCTGGTAAAGCTGCTGATAAGAGTGGAAATAAAGCTCTAGTAACTGCATTTGGTGCAATGAGAATGATTGTAACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQMIEFYLILTAVRKASSGIFWRLLIGTLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEVFSGEAGKAADKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTTCCATTACAGATGATAGAATTCTATTTAATTCTAACAGCT---------GTA---AGAAAAGCAAGCTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGTACACTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTA---------------TTT------TCA---GGTGAAGCTGGTAAAGCTGCTGATAAG------AGT---GGAAATAAAGCTCTA---GTA---ACT---GCA---TTT---GGT---GCAATG---AGAATGATTGTAACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILTA---V-RKASS-GI------------FWR-LLIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEV-----F--S-GEAGKAADK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-a]_1105104940074 [IV-Alpha8-a] JCVI_ORF_1105104940074_GS022_Open_Ocean_2m jcvi|1105104940074| 1105104940074 JCVI ORF 1105104940074 1105104940074 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/A subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 20-janv-04 Open_Ocean/2m_depth/S_32.3_psu/GS022/250_miles_from_Panama_City/Eastern_Tropical_Pacific Pacific Ocean marine 6.492778 -82.90389 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAACTGTTTGCTCTAACAGCTGTTGCCCTATTGGGTATTACAGGTGTAGCAAACGCAGCGACCGCTATGTTAGCTCAAGATGACTTTGTTGGGATATCTTTTTGGATAATTTCAATGGGTATGTTGGCTGCTACAGCGTTTTTCTTTATGGAGAGAAACACTGTTGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCAGGTCTAGTAACTGGTATTGCCTTCATCCATTACATGTACATGAGAGAAGTATGGGTGATGACTGGCGATTCACCAACAGTATATAGATATATTGACTGGTTAATTACTGTGCCATTACAGATGATAGAATTCTACTTAATTCTAGTAGCTGTAAGAAAAGCAAGTTCTGGAATTTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATTAATGCTACGCTTGGTTTTGTAATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTGTTCTCAGGTGAAGCTGGTAAAGCTGCTTCTAAGAGTGGAAACAAAGCTCTTGTAACTGCGTTCGGTGCAATGAGAATGATTGTAACTGTAGGTTGGGCTATTTACCCATTAGGTTATGTATTTGGTTACCTAACAGGTGGAGTAGATGCTAACTCATTAAACGTAGTATACAACTTAGCTGACTTTATAAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAGTTAGTTCAGCTGGCGCAAGAAGCAGA MKKLKLFALTAVALLGITGVANAATAMLAQDDFVGISFWIISMGMLAATAFFFMERNTVAPGWKTSVTVAGLVTGIAFIHYMYMREVWVMTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKASSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAAVSSAGARSR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAACTGTTTGCTCTAACAGCTGTTGCCCTATTGGGTATTACAGGTGTAGCAAACGCAGCGACCGCT---ATGTTAGCTCAAGATGACTTTGTTGGGATATCTTTTTGGATAATTTCAATGGGTATGTTGGCTGCTACAGCGTTTTTCTTTATGGAGAGAAACACTGTTGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCAGGTCTAGTAACTGGTATTGCCTTCATCCATTACATGTACATGAGAGAAGTATGGGTG------------------------------ATGACT---------------------GGCGATTCACCAACAGTATATAGATATATTGACTGG------------------------TTAATTACTGTGCCATTACAGATGATAGAATTCTACTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAGTTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACGCTTGGT---TTTGTAATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTG---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTTCTAAG------AGT---GGAAACAAAGCTCTT---GTA---ACT---GCG---TTC---GGT---GCAATG---AGAATGATTGTAACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTATGTATTTGGTTACCTA---------------------------------------ACAGGTGGAGTAGATGCTAACTCATTAAACGTAGTATACAACTTAGCTGACTTTATAAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAGTTAGTTCA---GCTGGCGCAAGAAGCAGA--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALTAVALLGITGVANAATA-MLAQDDFVGISFWIISMGMLAATAFFFMERNTVAP-GWKTSVTVAGLVTGIAFIHYMYMREVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKASS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAAVSS-AGARSR----------------------------------- [IV-Alpha8-a]_1105092415992 [IV-Alpha8-a] JCVI_ORF_1105092415992_GS028_Coastal_2m jcvi|1105092415992| 1105092415992 JCVI ORF 1105092415992 1105092415992 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/A subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 04-FEB-2004 Coastal/2m_depth/S_n.a/GS028/Coastal_Floreana/Galapagos_Islands Pacific Ocean marine -1.2169445 -90.319725 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCCGTTACGGTTGTAGCCCTTATGGGAATCACAACTGTTGCAAACGCTGCGACCGCTATGTTAGCCCAAGATGACTTCGTTGGAATTTCTTTTTGGATAATTTCAATGGGTATGTTGGCAGCTACAGCTTTTTTCTTTATGGAAAGAAACACTGTTGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCAGGTCTTGTAACTGGTATCGCATTCATTCACTACATGTACATGAGAGAAGTATGGGTAATGACTGGCGATTCACCGACAGTATATAGATATATTGATTGGTTAATCACTGTTCCGTTACAGATGATAGAATTTTACTTAATTCTAGTAGCTGTAAGAAAAGCAAATTCTGGAATTTTCTGGAGATTGTTAATTGGATCATTGGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCGTAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCTCTAGTAACTGCGTTCAGTGCAATGAGAATGATTGTTACTGTAGGTTGGGCTATTTACCCATTAGGTTATGTATTTGGTTACTTAACAGGTGGTGTAGATGCTAACTCACTTAACGTAGTGTACAACTTAGCTGACTTTATAAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAGTAAGTTCAGCTGGTGCAAGAAGCAGA MKKLKLFAVTVVALMGITTVANAATAMLAQDDFVGISFWIISMGMLAATAFFFMERNTVAPGWKTSVTVAGLVTGIAFIHYMYMREVWVMTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFSAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVVYNLADFINKIAFGLVIWAAAVSSAGARSR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCCGTTACGGTTGTAGCCCTTATGGGAATCACAACTGTTGCAAACGCTGCGACCGCT---ATGTTAGCCCAAGATGACTTCGTTGGAATTTCTTTTTGGATAATTTCAATGGGTATGTTGGCAGCTACAGCTTTTTTCTTTATGGAAAGAAACACTGTTGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCAGGTCTTGTAACTGGTATCGCATTCATTCACTACATGTACATGAGAGAAGTATGGGTA------------------------------ATGACT---------------------GGCGATTCACCGACAGTATATAGATATATTGATTGG------------------------TTAATCACTGTTCCGTTACAGATGATAGAATTTTACTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAATTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGATCATTGGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCGTAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCTCTA---GTA---ACT---GCG---TTC---AGT---GCAATG---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTATGTATTTGGTTACTTA---------------------------------------ACAGGTGGTGTAGATGCTAACTCACTTAACGTAGTGTACAACTTAGCTGACTTTATAAACAAAATTGCATTCGGTCTAGTAATCTGGGCTGCTGCAGTAAGTTCA---GCTGGTGCAAGAAGCAGA--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFAVTVVALMGITTVANAATA-MLAQDDFVGISFWIISMGMLAATAFFFMERNTVAP-GWKTSVTVAGLVTGIAFIHYMYMREVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-S-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVVYNLADFINKIAFGLVIWAAAVSS-AGARSR----------------------------------- [IV-Alpha8-a]_EF088574 [IV-Alpha8-a] clone_AT37025_EF088574 gi|126843387|gb|EF088574| Uncultured bacterium clone AT37025 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT37025 putative proteorhodopsin gene, partial cds. EF088574 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/A subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na surface water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGCTCGCCGCTACTGCCTTCTTCTTCATGGAAAGAAGTTCTGTTGCTCCTGGCTGGAAAACGTCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGAGAAGTATGGGTGATGACTGGTGATTCACCAACAGTATACAGATATATTGACTGGTTAATTACTGTGCCACTACAGATGATAGAATTCTACTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATTTTCTGGAGATTGTTAATTGGTTCATTAGTAATGTTAATTGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCTGCTAAAAGTGGAAATAAATCGTTAGTAACTGCGTTCAGTGCAATGAGAATGATTGTAACTGTAGGTTGGGCCATATATCCA MLAATAFFFMERSSVAPGWKTSVTVAGLVTGIAFIHYMYMREVWVMTGDSPTVYRYIDWLITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKSLVTAFSAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTCGCCGCTACTGCCTTCTTCTTCATGGAAAGAAGTTCTGTTGCTCCT---GGCTGGAAAACGTCAGTAACTGTTGCAGGTCTTGTAACTGGTATTGCATTCATCCATTACATGTACATGAGAGAAGTATGGGTG------------------------------ATGACT---------------------GGTGATTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACTGTGCCACTACAGATGATAGAATTCTACTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGTTAATTGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCTGCTAAA------AGT---GGAAATAAATCGTTA---GTA---ACT---GCG---TTC---AGT---GCAATG---AGAATGATTGTAACTGTA---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFMERSSVAP-GWKTSVTVAGLVTGIAFIHYMYMREVWV----------MT-------GDSPTVYRYIDW--------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKSL-V-T-A-F-S-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ903126 [IV-Alpha8-SAR11/Himb5] clone_A1S0021_DQ903126 gi|116293981|gb|DQ903126| Uncultured bacterium clone A1S0021 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A1S0021 putative proteorhodopsin gene, partial cds. DQ903126 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na South China Sea surface water (SCS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na ATGCTCGCCGCTACTGTTTTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATCATGACTGGTGAGTCACCTACAGTTTACAGATATATTGACTGGTTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCAGTAAACAAATCAGACTCTGGAATTTTCTGGAGACTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGATGGGCCATTTACCCC MLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYIYMREVWIMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTCGCCGCTACTGTTTTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATC------------------------------ATGACT---------------------GGTGAGTCACCTACAGTTTACAGATATATTGACTGG------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCA---------GTA---AACAAATCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGATGG---------GCCATTTACCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYIYMREVWI----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ903128 [IV-Alpha8-SAR11/Himb5] clone_A1S0023_DQ903128 gi|116293985|gb|DQ903128| Uncultured bacterium clone A1S0023 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A1S0023 putative proteorhodopsin gene, partial cds. DQ903128 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na South China Sea surface water (SCS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na ATGCTCGCCGCTACTGTTTTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATCATGACTGGTGAGTCACCTACAGTTTACAGATATATTGACTGGTTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCAGTAAACAAATCAGACTCTGGAATTTTCTGGAGACTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGATGGGCCATTTACCCC MLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYIYMREVWIMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTCGCCGCTACTGTTTTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATC------------------------------ATGACT---------------------GGTGAGTCACCTACAGTTTACAGATATATTGACTGG------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCA---------GTA---AACAAATCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGATGG---------GCCATTTACCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYIYMREVWI----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ903132 [IV-Alpha8-SAR11/Himb5] clone_A1S0035_DQ903132 gi|116293993|gb|DQ903132| Uncultured bacterium clone A1S0035 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A1S0035 putative proteorhodopsin gene, partial cds. DQ903132 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na South China Sea surface water (SCS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na ATGCTCGCCGCTACTGTTTTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATCATGACTGGTGAGTCACCTACAGTTTACAGATATATTGACTGGTTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCAGTAAACAAATCAGACTCTGGAATTTTCTGGAGACTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTATTCTCTGGTGAAGCAGGTAAGAAAGCAGCAAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGATGGGCCATTTACCCC MLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYIYMREVWIMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKKAAKSGNKSLVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTCGCCGCTACTGTTTTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATC------------------------------ATGACT---------------------GGTGAGTCACCTACAGTTTACAGATATATTGACTGG------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCA---------GTA---AACAAATCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAAAGCAGCAAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGATGG---------GCCATTTACCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYIYMREVWI----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKKAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ903129 [IV-Alpha8-SAR11/Himb5] clone_A1S0030_DQ903129 gi|116293987|gb|DQ903129| Uncultured bacterium clone A1S0030 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A1S0030 putative proteorhodopsin gene, partial cds. DQ903129 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na South China Sea surface water (SCS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na ATGCTCGCCGCTACTGTTTTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATCATGACTGGTGAGTCACCTACAGTTTACAGATATATTGACTGGTTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCAGTAAACAAATCAGACTCTGGAATTTTCTGGAGACTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGATGGGCCATTTACCCC MLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYIYMREVWIMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTCGCCGCTACTGTTTTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATC------------------------------ATGACT---------------------GGTGAGTCACCTACAGTTTACAGATATATTGACTGG------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCA---------GTA---AACAAATCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGATGG---------GCCATTTACCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYIYMREVWI----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ903122 [IV-Alpha8-SAR11/Himb5] clone_A1S0012_DQ903122 gi|116293973|gb|DQ903122| Uncultured bacterium clone A1S0012 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A1S0012 putative proteorhodopsin gene, partial cds. DQ903122 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na South China Sea surface water (SCS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na ATGCTTGCCGCTACTGTCTTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATCATGACTGGTGAGTCACCTACAGTTTACAGATATATTGACTGGTTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCAGTAAACAAATCAGACTCTGGAATTTTCTGGAGACTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGATGGGCTATCTACCCA MLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYIYMREVWIMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACTGTCTTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATC------------------------------ATGACT---------------------GGTGAGTCACCTACAGTTTACAGATATATTGACTGG------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCA---------GTA---AACAAATCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGATGG---------GCTATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYIYMREVWI----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ903127 [IV-Alpha8-SAR11/Himb5] clone_A1S0022_DQ903127 gi|116293983|gb|DQ903127| Uncultured bacterium clone A1S0022 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A1S0022 putative proteorhodopsin gene, partial cds. DQ903127 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na South China Sea surface water (SCS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na ATGCTTGCCGCTACTGTCTTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATCATGACTGGTGAGTCACCTACAGTTTACAGATATATTGACTGGTTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCAGTAAACAAATCAGACTCTGGAATTTTCTGGAGACTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGATGGGCTATCTACCCA MLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYIYMREVWIMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACTGTCTTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATC------------------------------ATGACT---------------------GGTGAGTCACCTACAGTTTACAGATATATTGACTGG------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCA---------GTA---AACAAATCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGATGG---------GCTATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYIYMREVWI----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_EU915845 [IV-Alpha8-SAR11/Himb5] PF12040_env_samples_EU915845 gi|229358572|gb|EU915845| Uncultured microorganism clone PF12040 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF12040 putative proteorhodopsin gene, partial cds EU915845 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTGGCCGCTACTGCTTTCTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATCATGACTGGCGAGTCACCTACAGTTTACAGATATATTGACTGGTTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCAGTAAACAAATCAGACTCTGGAATTTTCTGGAGACTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATTGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGCTGGGCCATCTAC MLAATAFFLERSSVPAGWRVSMTVAGLVTGIAFVHYIYMREVWIMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGCT---TTCTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATC------------------------------ATGACT---------------------GGCGAGTCACCTACAGTTTACAGATATATTGACTGG------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCA---------GTA---AACAAATCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATTGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGCTGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATA-FFLERSSVPA-GWRVSMTVAGLVTGIAFVHYIYMREVWI----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ903136 [IV-Alpha8-SAR11/Himb5] clone_A1S0103_DQ903136 gi|116294001|gb|DQ903136| Uncultured bacterium clone A1S0103 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A1S0103 putative proteorhodopsin gene, partial cds. DQ903136 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na South China Sea surface water (SCS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na ATGCTGGCCGCTACTGCATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATCATGACTGGTGAGTCACCTACAGTTTACAGATATATTGACTGGTTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCAGTAAACAAATCAGACTCTGGAATTTTCTGGAGACTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGCGCAATGAGAATGATCGGTACAGTAGGTTGGGCAATCTACCCA MLAATAFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYIYMREVWIMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIGTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGCATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATC------------------------------ATGACT---------------------GGTGAGTCACCTACAGTTTACAGATATATTGACTGG------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCA---------GTA---AACAAATCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGC---GCAATG---AGAATGATCGGTACAGTA---------------------------------------------------------------GGTTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYIYMREVWI----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIGTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_EU915773 [IV-Alpha8-SAR11/Himb5] PF97515_env_samples_EU915773 gi|229358428|gb|EU915773| Uncultured microorganism clone PF97515 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF97515 putative proteorhodopsin gene, partial cds EU915773 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTCGCCGCTACTGCGTTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATCATGACTGGTGAGTCACCTACAGTTTACAGATATATTGACTGGTTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCAGTAAACAAATCAGACTCTGGAATTTTCTGGAGACTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGCTGGGCGATATAC MVAATAFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYIYMREVWIMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCCGCTACTGCGTTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATC------------------------------ATGACT---------------------GGTGAGTCACCTACAGTTTACAGATATATTGACTGG------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCA---------GTA---AACAAATCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGCTGG---------GCGATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYIYMREVWI----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_EU916059 [IV-Alpha8-SAR11/Himb5] clone_A150049_EU916059 gi|229358999|gb|EU916059| Uncultured bacterium clone A150049 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A150049 putative proteorhodopsin gene, partial cds. EU916059 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTTGCCGCTACTGTTTTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATCGGTGAGTCACCTACAGTTTACAGATATATTGACTGGTTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCAGTAAAATCAGACTCTGGAATTTTCTGGAGACTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCGATGAGAATGATCGTTACAGTAGGATGGGCGATTTAC MVAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYIYMREVWIGESPTVYRYIDWLITVPLLMLEFYFVLAAVKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTTTTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATC---------------------------------------------------------GGTGAGTCACCTACAGTTTACAGATATATTGACTGG------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCA---------GTA------AAATCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGATGG---------GCGATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYIYMREVWI-------------------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V--KSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ903131 [IV-Alpha8-SAR11/Himb5] clone_A1S0033_DQ903131 gi|116293991|gb|DQ903131| Uncultured bacterium clone A1S0033 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A1S0033 putative proteorhodopsin gene, partial cds. DQ903131 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na South China Sea surface water (SCS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na ATGGTCGCCGCTACTGTGTTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATCATGACTGGTGAGTCACCTACAGTTTACAGATATATTGACTGGTTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCAGTAAACAAATCAGACTCTGGAATTTTCTGGAGACTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGCTGGGCGATCTATCCA MVAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYIYMREVWIMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCCGCTACTGTGTTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATC------------------------------ATGACT---------------------GGTGAGTCACCTACAGTTTACAGATATATTGACTGG------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCA---------GTA---AACAAATCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGCTGG---------GCGATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYIYMREVWI----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ926986 [IV-Alpha8-SAR11/Himb5] clone_PF91025_DQ926986 gi|116294087|gb|DQ926986| Uncultured bacterium clone PF91025 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF91025 putative proteorhodopsin gene, partial cds. DQ926986 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGGTGGCCGCTACTGTTTTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCCGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATCATGACTGGTGAGTCACCTACAGTTTACAGATATATTGACTGGTTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCAGTAAACAAATCAGACTCTGGAATTTTCTGGAGACTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGCTGGGCGATCTATCCA MVAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYIYMREVWIMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTTTTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCCGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATC------------------------------ATGACT---------------------GGTGAGTCACCTACAGTTTACAGATATATTGACTGG------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCA---------GTA---AACAAATCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGCTGG---------GCGATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYIYMREVWI----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_EU915764 [IV-Alpha8-SAR11/Himb5] PF75117_env_samples_EU915764 gi|229358410|gb|EU915764| Uncultured microorganism clone PF75117 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF75117 putative proteorhodopsin gene, partial cds EU915764 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTAGCCGCTACTGCATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATCATGACTGGTGAGTCACCTACAGTTTACAGATATATTGACTGGTTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCAGTAAACAAATCAGACTCTGGAATTTTCTGGAGACTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGGTGGGCCATCTAT MVAATAFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYIYMREVWIMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGCATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATC------------------------------ATGACT---------------------GGTGAGTCACCTACAGTTTACAGATATATTGACTGG------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCA---------GTA---AACAAATCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGGTGG---------GCCATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYIYMREVWI----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_EU915789 [IV-Alpha8-SAR11/Himb5] PF97504_env_samples_EU915789 gi|229358460|gb|EU915789| Uncultured microorganism clone PF97504 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF97504 putative proteorhodopsin gene, partial cds EU915789 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTATTAGCGGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATCATGACTGGTGAGTCACCTACAGTTTACAGATATATTGACTGGTTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCAGTAAACAAATCAGACTCTGGAATTTTCTGGAGACTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGGTGGGCGATCTAC LLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYIYMREVWIMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATC------------------------------ATGACT---------------------GGTGAGTCACCTACAGTTTACAGATATATTGACTGG------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCA---------GTA---AACAAATCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGGTGG---------GCGATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYIYMREVWI----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_EU915836 [IV-Alpha8-SAR11/Himb5] PF12019_env_samples_EU915836 gi|229358554|gb|EU915836| Uncultured microorganism clone PF12019 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF12019 putative proteorhodopsin gene, partial cds EU915836 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTATTAGGTGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATCATGACTGGTGAGTCACCTACAGTTTACAGATATATTGACTGGTTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCAGTAAACAAATCAGACTCTGGAATTTTCTGGAGACTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGTTGGGCAATTTAC LLGATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYIYMREVWIMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGGTGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATC------------------------------ATGACT---------------------GGTGAGTCACCTACAGTTTACAGATATATTGACTGG------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCA---------GTA---AACAAATCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------LLGATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYIYMREVWI----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_EU915823 [IV-Alpha8-SAR11/Himb5] PF12050_env_samples_EU915823 gi|229358528|gb|EU915823| Uncultured microorganism clone PF12050 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF12050 putative proteorhodopsin gene, partial cds EU915823 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTATTAGCGGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGGGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATCATGACTGGTGAGTCACCTACAGTTTACAGATATATTGACTGGTTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCAGTAAACAAATCAGACTCTGGAATTTTCTGGAGACTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGGTGGGCAATTTAC LLAATVFFFLERSSVPAGWGVSMTVAGLVTGIAFVHYIYMREVWIMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGGGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATC------------------------------ATGACT---------------------GGTGAGTCACCTACAGTTTACAGATATATTGACTGG------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCA---------GTA---AACAAATCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGGTGG---------GCAATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFLERSSVPA-GWGVSMTVAGLVTGIAFVHYIYMREVWI----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ887800 [IV-Alpha8-SAR11/Himb5] clone_PF10028_DQ887800 gi|116294300|gb|DQ887800| Uncultured bacterium clone PF10028 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF10028 putative proteorhodopsin gene, partial cds. DQ887800 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2007 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na CTATTAGCGGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATCATGACTGGTGAGTCACCTACAGTTTACAGATATATTGACTGGTTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCAGTAAACAAATCAGACTCTGGAATTTTCTGGAGACTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGCTGGGCTATCTATCCA LLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYIYMREVWIMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATC------------------------------ATGACT---------------------GGTGAGTCACCTACAGTTTACAGATATATTGACTGG------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCA---------GTA---AACAAATCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGCTGG---------GCTATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYIYMREVWI----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_EU915762 [IV-Alpha8-SAR11/Himb5] PF75115_env_samples_EU915762 gi|229358406|gb|EU915762| Uncultured microorganism clone PF75115 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF75115 putative proteorhodopsin gene, partial cds EU915762 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na GTATTAGCGGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATCATGACTGGTGAGTCACCTACAGTTTGCAGATATATTGACTGGTTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCAGTAAACAAATCAGACTCTGGAATTTTCTGGAGACTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATAAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGCTGGGCTATCTAC VLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYIYMREVWIMTGESPTVCRYIDWLITVPLLMLEFYFVLAAVNKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYKVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATC------------------------------ATGACT---------------------GGTGAGTCACCTACAGTTTGCAGATATATTGACTGG------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCA---------GTA---AACAAATCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATAAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGCTGG---------GCTATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------VLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYIYMREVWI----------MT-------GESPTVCRYIDW--------LITVPLLMLEFYFVLAA---V-NKSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYKV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_EU915794 [IV-Alpha8-SAR11/Himb5] PF92060_env_samples_EU915794 gi|229358470|gb|EU915794| Uncultured microorganism clone PF92060 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF92060 putative proteorhodopsin gene, partial cds EU915794 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na GTATTAGCGGCTACTGTATTCTTCTTCATGGAAAGAGGAACAGTGCATCCTGGCTGGAAAACGTCAGTAACTGTAGCTGGACTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATCATGACTGGTGAGTCACCTACAGTTTACAGATATATTGACTGGTTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCAGTAAACAAATCAGACTCTGGAATTTTCTGGAGACTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCCGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTATTCTCTGGTGAAGCAGGTAGGAGAGCAGCAAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGCTGGGCAATCTAC VLAATVFFFMERGTVHPGWKTSVTVAGLVTGIAFVHYIYMREVWIMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGRRAAKSGNKSLVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGGCTACTGTATTCTTCTTCATGGAAAGAGGAACAGTGCATCCT---GGCTGGAAAACGTCAGTAACTGTAGCTGGACTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATC------------------------------ATGACT---------------------GGTGAGTCACCTACAGTTTACAGATATATTGACTGG------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCA---------GTA---AACAAATCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCC------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAGGAGAGCAGCAAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGCTGG---------GCAATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------VLAATVFFFMERGTVHP-GWKTSVTVAGLVTGIAFVHYIYMREVWI----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGRRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_EU915839 [IV-Alpha8-SAR11/Himb5] PF12028_env_samples_EU915839 gi|229358560|gb|EU915839| Uncultured microorganism clone PF12028 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF12028 putative proteorhodopsin gene, partial cds EU915839 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na GTATTAGCGTCTACTGTATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATCATGACTGGTGAGTCACCTACAGTTTACAGATATATTGACTGGTTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCAGTGAACAAATCAGACTCTGGAATTTTCTGGAGACTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGCTGGGCTATTTAC VLASTVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYIYMREVWIMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGTCTACTGTATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATC------------------------------ATGACT---------------------GGTGAGTCACCTACAGTTTACAGATATATTGACTGG------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCA---------GTG---AACAAATCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGCTGG---------GCTATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------VLASTVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYIYMREVWI----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_EU915782 [IV-Alpha8-SAR11/Himb5] PF97535_env_samples_EU915782 gi|229358446|gb|EU915782| Uncultured microorganism clone PF97535 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF97535 putative proteorhodopsin gene, partial cds EU915782 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na GTATTAGCGGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATCATGACTGGTGAGTCACCTACAGTTTACAGATATATTGACTGGTTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCAGTAAACAAATCAGACTCTGGAATTTTCTGGAGACTAATGATTGGTACATTAGTAATGCTAGTAGGTGGGTACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGCTGGGCGATCTAC VLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYIYMREVWIMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATC------------------------------ATGACT---------------------GGTGAGTCACCTACAGTTTACAGATATATTGACTGG------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCA---------GTA---AACAAATCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTAATGATTGGTACATTAGTAATGCTAGTAGGTGGGTACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGCTGG---------GCGATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------VLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYIYMREVWI----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_EU915771 [IV-Alpha8-SAR11/Himb5] PF97510_env_samples_EU915771 gi|229358424|gb|EU915771| Uncultured microorganism clone PF97510 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF97510 putative proteorhodopsin gene, partial cds EU915771 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na GTATTAGCGGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAGCTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATCATGACTGGTGAGTCACCTACAGTTTACAGATATATTGACTGGTTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCAGTAAACAAATCAGACTCTGGAATTTTCTGGAGACTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGCGAATGATCGTTACAGTAGGTTGGGCAATCTAT VLAATVFFFLERSSVPAGWRVSMTVAGLVAGIAFVHYIYMREVWIMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAGCTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATC------------------------------ATGACT---------------------GGTGAGTCACCTACAGTTTACAGATATATTGACTGG------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCA---------GTA---AACAAATCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---CGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------VLAATVFFFLERSSVPA-GWRVSMTVAGLVAGIAFVHYIYMREVWI----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_EU916062 [IV-Alpha8-SAR11/Himb5] clone_A150060_EU916062 gi|229359005|gb|EU916062| Uncultured bacterium clone A150060 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A150060 putative proteorhodopsin gene, partial cds. EU916062 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTATTAGCGGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACACTTACATGAGAGAAGTATGGATCGGTGAGTCACCTACAGTTTACAGATATATTGACTGGTTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCAGTAAAATCAGACTCTGGAATTTTCTGGAGACTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGTTGGGCCATCTAT LLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYTYMREVWIGESPTVYRYIDWLITVPLLMLEFYFVLAAVKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACACTTACATGAGAGAAGTATGGATC---------------------------------------------------------GGTGAGTCACCTACAGTTTACAGATATATTGACTGG------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCA---------GTA------AAATCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCCATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYTYMREVWI-------------------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V--KSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_EU916065 [IV-Alpha8-SAR11/Himb5] clone_A150065_EU916065 gi|229359011|gb|EU916065| Uncultured bacterium clone A150065 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A150065 putative proteorhodopsin gene, partial cds. EU916065 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTATTAGCGGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATCGGTGAGTCACCTACAGTTTACAGATATATTGACTGGTTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCAGTAAAATCAGACTCTGGAATTTTCTGGAGACTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGTTGGGCCATCTAC LLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYIYMREVWIGESPTVYRYIDWLITVPLLMLEFYFVLAAVKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATC---------------------------------------------------------GGTGAGTCACCTACAGTTTACAGATATATTGACTGG------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCA---------GTA------AAATCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYIYMREVWI-------------------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V--KSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_EU915948 [IV-Alpha8-SAR11/Himb5] clone_23HO15-14_EU915948 gi|229358778|gb|EU915948| Uncultured bacterium clone 23HO15-14 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 23HO15-14 putative proteorhodopsin gene, partial cds. EU915948 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTATTAGCGGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATCGGTGACTCACCAACTGTATACAGATACATTGACTGGTTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCAGTAAAATCAGACTCTGGAATTTTCTGGAGACTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGTTGGGCCATCTAC LLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIGDSPTVYRYIDWLITVPLLMLEFYFVLAAVKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATC---------------------------------------------------------GGTGACTCACCAACTGTATACAGATACATTGACTGG------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCA---------GTA------AAATCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI-------------------GDSPTVYRYIDW--------LITVPLLMLEFYFVLAA---V--KSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_EF088641 [IV-Alpha8-SAR11/Himb5] PF13033_env_samples_EF088641 gi|126843532|gb|EF088641| Uncultured bacterium clone PF13033 putative proteorhodopsin gene, partial cds Uncultured bacterium clone PF13033 putative proteorhodopsin gene, partial cds EF088641 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na surface_water_sample Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na GTATTAGCGTCTACTGTATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATCATGACTGGTGAGTCACCAACAGTTTACAGATATATAGACTGGTTAATTACAGTGCCATTATTGATGTTAGAATTCTACTTTGTTCTAGCAGCAGTAAACAAATCAGACTCTGGAATTTTCTGGAGACTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCGATGAGAATGATCGTTACAGTAGGATGGGCCATCTAC VLASTVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYIYMREVWIMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGTCTACTGTATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATC------------------------------ATGACT---------------------GGTGAGTCACCAACAGTTTACAGATATATAGACTGG------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTACTTTGTTCTAGCAGCA---------GTA---AACAAATCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGATGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------VLASTVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYIYMREVWI----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_1105140209192 [IV-Alpha8-SAR11/Himb5] JCVI_ORF_1105140209192_GS011_Estuary_1m jcvi|1105140209192| 1105140209192 JCVI ORF 1105140209192 1105140209192 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 18-nov-03 Estuary/1m_depth/S_n.a/GS011/Delaware_Bay/NJ/North_American_East_Coast Atlantic Ocean marine 39.417778 -75.504166 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCTCTTACAGTTGTAGCTCTTATGGGCGTAACTGGTGCAGCAAACGCAGAAACTGTGCTTTTAGCCTCTGATGACTTTGTTGGAATTTCATTCTGGCTAGTTTCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCCTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATCATGACTGGTGAGTCACCAACAGTTTACAGATATATTGACTGGTTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTTTAGCAGCAGTAAACAAATCAGACTCTGGAATTTTCTGGAGACTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAGTCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCGATCTACCCATTAGGTTACATTTTTGGTTACCTAACAGGTGGTGTAGATGCTAACTCACTAAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCATTTGGGCAGCAGCTATGCAACAACCTGGTAGAGCTAAG MKKLKLFALTVVALMGVTGAANAETVLLASDDFVGISFWLVSMACLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYIYMREVWIMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMQQPGRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCTCTTACAGTTGTAGCTCTTATGGGCGTAACTGGTGCAGCAAACGCAGAAACTGTG---CTTTTAGCCTCTGATGACTTTGTTGGAATTTCATTCTGGCTAGTTTCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCCTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATC------------------------------ATGACT---------------------GGTGAGTCACCAACAGTTTACAGATATATTGACTGG------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTTTAGCAGCA---------GTA---AACAAATCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAGTCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCGATCTACCCATTAGGTTACATTTTTGGTTACCTA---------------------------------------ACAGGTGGTGTAGATGCTAACTCACTAAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCATTTGGGCAGCAGCTATGCAACAA---CCTGGTAGAGCTAAG------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------MKKLKLFALTVVALMGVTGAANAETV-LLASDDFVGISFWLVSMACLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYIYMREVWI----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMQQ-PGRAK------------------------------------ [IV-Alpha8-SAR11/Himb5]_1105154712088 [IV-Alpha8-SAR11/Himb5] JCVI_ORF_1105154712088_GS014_Coastal_1m jcvi|1105154712088| 1105154712088 JCVI ORF 1105154712088 1105154712088 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 20-DEC-2003 Coastal/1m_depth/S_n.a/GS014/South_of_Charleston/SC/North_American_East_Coast Atlantic Ocean marine 32.506943 -79.263885 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TTGTTTGCTCTTACAGTTGTTGCTCTTATGGGCGTAACTGGTGCGGCAAACGCAGAAACTGTGCTTTTAGCCTCTGATGACTTTGTTGGAATTTCATTCTGGCTAGTTTCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATCATGACTGGTGAGTCACCAACAGTTTACAGATATATTGACTGGTTAATTACAGTGCCATTATTGATGTTAGAATTCTACTTTGTTCTAGCAGCAGTAAACAAATCAGACTCTGGAATTTTCTGGAGACTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCTAAAAGTGGTAACAAGTCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCGATCTACCCATTAGGTTACATTTTTGGTTACCTAACAGGTGGTGTAGATGCTAACTCACTAAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCATTTGGGCAGCAGCTATGCAACAACCTGGTAGAGCTAAG LFALTVVALMGVTGAANAETVLLASDDFVGISFWLVSMACLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYIYMREVWIMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMQQPGRAK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTTGCTCTTACAGTTGTTGCTCTTATGGGCGTAACTGGTGCGGCAAACGCAGAAACTGTG---CTTTTAGCCTCTGATGACTTTGTTGGAATTTCATTCTGGCTAGTTTCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATC------------------------------ATGACT---------------------GGTGAGTCACCAACAGTTTACAGATATATTGACTGG------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTACTTTGTTCTAGCAGCA---------GTA---AACAAATCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCTAAA------AGT---GGTAACAAGTCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCGATCTACCCATTAGGTTACATTTTTGGTTACCTA---------------------------------------ACAGGTGGTGTAGATGCTAACTCACTAAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCATTTGGGCAGCAGCTATGCAACAA---CCTGGTAGAGCTAAG------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------LFALTVVALMGVTGAANAETV-LLASDDFVGISFWLVSMACLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYIYMREVWI----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMQQ-PGRAK------------------------------------ [IV-Alpha8-SAR11/Himb5]_1105109624366 [IV-Alpha8-SAR11/Himb5] JCVI_ORF_1105109624366_GS014_Coastal_1m jcvi|1105109624366| 1105109624366 JCVI ORF 1105109624366 1105109624366 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 20-DEC-2003 Coastal/1m_depth/S_n.a/GS014/South_of_Charleston/SC/North_American_East_Coast Atlantic Ocean marine 32.506943 -79.263885 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCTCTTACAGTTGTTGCTCTTATGGGTGTAACTGGTGCAGCAAACGCAGAAACTGTGCTTTTAGCCTCTGATGACTTTGTTGGAATTTCATTCTGGCTAGTATCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATCATGACTGGTGAGTCACCAACAGTTTACAGATATATTGACTGGTTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCAGTAAACAAATCAGACTCTGGAATTTTCTGGAGACTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTAACTGTAGGTTGGGCGATCTACCCATTAGGTTACATTTTTGGTTACCTAACAGGTGGTGTAGATGCTAACTCACTAAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCATTTGGGCAGCAGCTATGCAACAACCTGGTAGAGCTAAG MKKLKLFALTVVALMGVTGAANAETVLLASDDFVGISFWLVSMACLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYIYMREVWIMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMQQPGRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCTCTTACAGTTGTTGCTCTTATGGGTGTAACTGGTGCAGCAAACGCAGAAACTGTG---CTTTTAGCCTCTGATGACTTTGTTGGAATTTCATTCTGGCTAGTATCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATC------------------------------ATGACT---------------------GGTGAGTCACCAACAGTTTACAGATATATTGACTGG------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCA---------GTA---AACAAATCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACTGTA---------------------------------------------------------------GGTTGG---------GCGATCTACCCATTAGGTTACATTTTTGGTTACCTA---------------------------------------ACAGGTGGTGTAGATGCTAACTCACTAAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCATTTGGGCAGCAGCTATGCAACAA---CCTGGTAGAGCTAAG------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------MKKLKLFALTVVALMGVTGAANAETV-LLASDDFVGISFWLVSMACLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYIYMREVWI----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMQQ-PGRAK------------------------------------ [IV-Alpha8-SAR11/Himb5]_1105090480822 [IV-Alpha8-SAR11/Himb5] JCVI_ORF_1105090480822_GS021_Coastal_2m jcvi|1105090480822| 1105090480822 JCVI ORF 1105090480822 1105090480822 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 19-janv-04 Coastal/2m_depth/S_30.7_psu/GS021/Gulf_of_Panama/Eastern_Tropical_Pacific Pacific Ocean marine 8.129167 -79.69111 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TTGTTTGCTCTTACAGTTGTTGCTCTTATGGGTGTAACTGGTGCAGCAAACGCAGAAACTGTGCTTTTAGCCTCTGATGACTTTGTTGGAATTTCATTCTGGCTAGTTTCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATCATGACTGGTGAGTCACCAACAGTTTACAGATATATTGACTGGTTAATTACAGTGCCATTATTGATGTTAGAATTCTACTTTGTTCTAGCAGCAGTAAACAAATCAGACTCTGGAATTTTCTGGAGACTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCGATCTACCCATTAGGTTACATTTTTGGTTACCTAACAGGTGGTGTAGATGCTAACTCACTAAACGTGATTTACAATGCAGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCATTTGGGCAGCAGCTATGCAACAACCTGGTAGAGCTAAG LFALTVVALMGVTGAANAETVLLASDDFVGISFWLVSMACLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYIYMREVWIMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMQQPGRAK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTTGCTCTTACAGTTGTTGCTCTTATGGGTGTAACTGGTGCAGCAAACGCAGAAACTGTG---CTTTTAGCCTCTGATGACTTTGTTGGAATTTCATTCTGGCTAGTTTCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATC------------------------------ATGACT---------------------GGTGAGTCACCAACAGTTTACAGATATATTGACTGG------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTACTTTGTTCTAGCAGCA---------GTA---AACAAATCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCGATCTACCCATTAGGTTACATTTTTGGTTACCTA---------------------------------------ACAGGTGGTGTAGATGCTAACTCACTAAACGTGATTTACAATGCAGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCATTTGGGCAGCAGCTATGCAACAA---CCTGGTAGAGCTAAG------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------LFALTVVALMGVTGAANAETV-LLASDDFVGISFWLVSMACLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYIYMREVWI----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMQQ-PGRAK------------------------------------ [IV-Alpha8-SAR11/Himb5]_EU915947 [IV-Alpha8-SAR11/Himb5] clone_23H015-19_EU915947 gi|229358776|gb|EU915947| Uncultured bacterium clone 23H015-19 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 23H015-19 putative proteorhodopsin gene, partial cds. EU915947 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTATTAGCGGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCAGTTCCAGCTGGTTGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATCGGTGAGTCACCAACAGTTTACAGATATATTGACTGGTTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCAGTAAAAGCAGACTCTGGAATCTTCTGGAGACTGATGATCGGAACATTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATCAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAAAAGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCCTTTGGTGCGGTGAGAATGATCGTTACAGTAGGCTGGGCGATTTAC LLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYIYMREVWIGESPTVYRYIDWLITVPLLMLEFYFVLAAVKADSGIFWRLMIGTLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEVFSGEAGKKAAKSGNKALVTAFGAVRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCAGTTCCAGCT---GGTTGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATC---------------------------------------------------------GGTGAGTCACCAACAGTTTACAGATATATTGACTGG------------------------TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCA---------GTA------AAAGCAGACTCT---GGAATC------------------------------------TTCTGGAGA---CTGATGATCGGAACATTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAAAAGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCC---TTT---GGT---GCGGTG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGCTGG---------GCGATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYIYMREVWI-------------------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V--KADS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEV-----F--S-GEAGKKAAK--S-GNKAL-V-T-A-F-G-AV-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_1105099345920 [IV-Alpha8-SAR11/Himb5] JCVI_ORF_1105099345920_GS028_Coastal_2m jcvi|1105099345920| 1105099345920 JCVI ORF 1105099345920 1105099345920 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 04-FEB-2004 Coastal/2m_depth/S_n.a/GS028/Coastal_Floreana/Galapagos_Islands Pacific Ocean marine -1.2169445 -90.319725 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TTGTTTGCTCTTACAGTTGTTGCCCTTATGGGTGTAACTGGTGCAGCAAATGCAGAAACTGTCCTTTTAGCTTCTGATGACTTTGTTGGAATTTCATTCTGGCTAGTATCAATGGCTTGTTTAGCTGCTACAGTGTTCTTTTTCTTAGAGAGAAGTTCAGTGCCAGCTGGTTGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATCATGACTGGTGAGTCACCAACAGTTTACAGATATATTGACTGGTTAATTACAGTTCCGCTACTAATGTTGGAATTCTATTTTGTTCTAGCAGCAGTAAACAAAGCAGACTCTGGAATATTCTGGAGACTGATGATCGGAACATTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAAAAGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACAGTAGGTTGGGCGATTTACCCATTAGGTTACGTATTTGGTTACTTAACAGGTGGAGTAGATGCAAACTCACTAAACGTGATTTATAACGCAGCTGACTTCTTGAACAAGATCGCTTTCGGTCTAATCATTTGGGCAGCAGCTATGCAGCAGCCTGGTAGAGCTAGA LFALTVVALMGVTGAANAETVLLASDDFVGISFWLVSMACLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYIYMREVWIMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKADSGIFWRLMIGTLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEVFSGEAGKKAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMQQPGRAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTTGCTCTTACAGTTGTTGCCCTTATGGGTGTAACTGGTGCAGCAAATGCAGAAACTGTC---CTTTTAGCTTCTGATGACTTTGTTGGAATTTCATTCTGGCTAGTATCAATGGCTTGTTTAGCTGCTACAGTGTTCTTTTTCTTAGAGAGAAGTTCAGTGCCAGCT---GGTTGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATC------------------------------ATGACT---------------------GGTGAGTCACCAACAGTTTACAGATATATTGACTGG------------------------TTAATTACAGTTCCGCTACTAATGTTGGAATTCTATTTTGTTCTAGCAGCA---------GTA---AACAAAGCAGACTCT---GGAATA------------------------------------TTCTGGAGA---CTGATGATCGGAACATTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAAAAGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCGATTTACCCATTAGGTTACGTATTTGGTTACTTA---------------------------------------ACAGGTGGAGTAGATGCAAACTCACTAAACGTGATTTATAACGCAGCTGACTTCTTGAACAAGATCGCTTTCGGTCTAATCATTTGGGCAGCAGCTATGCAGCAG---CCTGGTAGAGCTAGA------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------LFALTVVALMGVTGAANAETV-LLASDDFVGISFWLVSMACLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYIYMREVWI----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEV-----F--S-GEAGKKAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMQQ-PGRAR------------------------------------ [IV-Alpha8-SAR11/Himb5]_1105150703232 [IV-Alpha8-SAR11/Himb5] JCVI_ORF_1105150703232_GS019_Coastal_2m jcvi|1105150703232| 1105150703232 JCVI ORF 1105150703232 1105150703232 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 12-janv-04 Coastal/2m_depth/S_35.4_psu/GS019/Northeast_of_Colon/Caribbean_Sea Caribbean Sea marine 10.716389 -80.25445 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATTGTTTGCTCTTACAGTTGTGCCGTTATGGGTGTAACTGCTGCAGCAAATGCAGAAACTGTCATTTTAGTTTCTGATGACTTTGTTGGAATTTCATTCTGGCTAGTATCAATGGCTTGTTTAGCTGCTACAGTGTTCTTTTTCTTAGAGAGAAGTTCAGTGCCAGCTGGTTGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTAGTGCATTCGTACACTACATTTATATGAGAGAAGTATGGATCATGACTGGTGAGTCACCAACAGTTTACAGATATATTGACTGGTTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCAGCAGTAAACAAAGCAGACTCTGGAATATTCTGGAGACTGATGATCGGAACATTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTTGTGATCGGTATGGCAGGTTGGGTATATATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAAAAGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACTGTAGGTTGGGCTATTTACCCATTAGGTTACGTATTTGGTTACTTAACAGGTGGAGTAGATGCTAACTCACTTAACGTGATTTACAACGCAGCTGACTTTTTGAATAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCTATGCAACAACCTGGTAGAGCTAGA IVCSYSCAVMGVTAAANAETVILVSDDFVGISFWLVSMACLAATVFFFLERSSVPAGWRVSMTVAGLVTGSAFVHYIYMREVWIMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKADSGIFWRLMIGTLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEVFSGEAGKKAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMQQPGRAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGTTTGCTCTTACAGTTGTGCCGTTATGGGTGTAACTGCTGCAGCAAATGCAGAAACTGTC---ATTTTAGTTTCTGATGACTTTGTTGGAATTTCATTCTGGCTAGTATCAATGGCTTGTTTAGCTGCTACAGTGTTCTTTTTCTTAGAGAGAAGTTCAGTGCCAGCT---GGTTGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTAGTGCATTCGTACACTACATTTATATGAGAGAAGTATGGATC------------------------------ATGACT---------------------GGTGAGTCACCAACAGTTTACAGATATATTGACTGG------------------------TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCAGCA---------GTA---AACAAAGCAGACTCT---GGAATA------------------------------------TTCTGGAGA---CTGATGATCGGAACATTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTGATCGGTATGGCAGGTTGGGTATATATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAAAAGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTACGTATTTGGTTACTTA---------------------------------------ACAGGTGGAGTAGATGCTAACTCACTTAACGTGATTTACAACGCAGCTGACTTTTTGAATAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCTATGCAACAA---CCTGGTAGAGCTAGA------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------IVCSYSCAVMGVTAAANAETV-ILVSDDFVGISFWLVSMACLAATVFFFLERSSVPA-GWRVSMTVAGLVTGSAFVHYIYMREVWI----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEV-----F--S-GEAGKKAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMQQ-PGRAR------------------------------------ [IV-Alpha8-SAR11/Himb5]_EU915770 [IV-Alpha8-SAR11/Himb5] PF97509_env_samples_EU915770 gi|229358422|gb|EU915770| Uncultured microorganism clone PF97509 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF97509 putative proteorhodopsin gene, partial cds EU915770 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTATTAGCGGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATCATGACTGGTGAGTCACCTACAGTTTACAGATATATTGACTGGTTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCAGTAAACAAATCAGACTCTGGAATTTTCTGGAGACTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAGGCTGGATACATCAACGCTACGCTTGGTTTTGTAATCGGTATGGCAGGTCGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCTGCTAAGAGCGGAAACAAAGCTCTTGTAACTGCGTTCAGTGCAATGAGAATGATTGTAACTGTAGGATGGGCTATTTAC LLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYIYMREVWIMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFVIGMAGRVYILYEVFSGEAGKAAAKSGNKALVTAFSAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATC------------------------------ATGACT---------------------GGTGAGTCACCTACAGTTTACAGATATATTGACTGG------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCA---------GTA---AACAAATCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAG---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACGCTTGGT---TTTGTAATCGGTATGGCAGGTCGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCTGCTAAG------AGC---GGAAACAAAGCTCTT---GTA---ACT---GCG---TTC---AGT---GCAATG---AGAATGATTGTAACTGTA---------------------------------------------------------------GGATGG---------GCTATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYIYMREVWI----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGRVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-S-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_EU079249 [IV-Alpha8-SAR11/Himb5] clone_B_Mtd1_023_EU079249 gi|156106657|gb|EU079249| Uncultured organism clone B Mtd1 023 putative proteorhodopsin gene, partial cds. Uncultured organism clone B Mtd1 023 putative proteorhodopsin gene, partial cds. EU079249 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; na light-energy conversion (ion transport) unknown [unclassified sequences/environmental samples] taxon:155900 genomic DNA other 27-FEB-2008 #na Sargasso Sea surface water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99-109 (2008) 18211270 #na GGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGAAAAGCTGCTGCTAAGAGTGGAAACAAATCTCTAGTAACTGCGTTCAGTGCAATGAGAATGATCGTTACAATAGGTTGGGC GYLGEAGYINATLGFVIGMAGWVYILYEVFSGEAGKAAAKSGNKSLVTAFSAMRMIVTIGW ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAATCTCTA---GTA---ACT---GCG---TTC---AGT---GCAATG---AGAATGATCGTTACAATA---------------------------------------------------------------GGTTGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKSL-V-T-A-F-S-AM-RMIVTI---------------------GW--------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_EU915946 [IV-Alpha8-SAR11/Himb5] clone_23H015-17_EU915946 gi|229358774|gb|EU915946| Uncultured bacterium clone 23H015-17 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 23H015-17 putative proteorhodopsin gene, partial cds. EU915946 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na GTATTAGCGTCTACTGTATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATCGGTGAGTCACCAACAGTTTACAGATATATTGACTGGTTAATTACAGTGCCATTATTGATGTTAGAATTCTACTTTGTTCTAGCAGCAGTAAAATCAGACTCTGGAATTTTCTGGAGACTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGATCTACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAAAAGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACAGTAGGTTGGGCGATTTAC VLASTVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYIYMREVWIGESPTVYRYIDWLITVPLLMLEFYFVLAAVKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKKAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGTCTACTGTATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATC---------------------------------------------------------GGTGAGTCACCAACAGTTTACAGATATATTGACTGG------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTACTTTGTTCTAGCAGCA---------GTA------AAATCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGATCTACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAAAAGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCGATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------VLASTVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYIYMREVWI-------------------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V--KSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKKAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_1105080487700 [IV-Alpha8-SAR11/Himb5] JCVI_ORF_1105080487700_GS012_Estuary_14m jcvi|1105080487700| 1105080487700 JCVI ORF 1105080487700 1105080487700 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 18-DEC-2003 Estuary/14m_depth/S_3.5_psu/GS012/Chesapeake_Bay/MD/North_American_East_Coast Atlantic Ocean marine 38.946945 -76.41722 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTAAAATTGTTTGCTCTTACAGCTGTTGCCCTAATGGGTGTTACAGGTGTAGCAAACGCAGAAACTGTGTTGTTAGCTTCTGATGATTTTGTTGGAATTTCGTTCTGGCTTGTATCAATGGCTTGTTTAGCAGCAACTGTATTCTTTTTCCTAGAAAGAAGTTCAGTTCCAGCGGGTTGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATCATGACTGGTGAGTCGCCAACAGTTTACAGATATATTGACTGGTTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGACTGATGTTAGGAACATTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAGGCAGGCAAGCGTGCAGCGAAAAGTGGTAACAAAGCACTTGTTACAGCTTTCGGTGCAATGAGAATGATCGTTACAGTAGGTTGGGCTATTTACCCATTAGGTTACATTTTTGGTTACCTAACAGGTGGAGTAGATGCTAGCTCACTAAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCATTTGGGCAGCAGCTATGAGCCAACCTAGTAGATCTAGA MKKLKLFALTAVALMGVTGVANAETVLLASDDFVGISFWLVSMACLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYIYMREVWIMTGESPTVYRYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDASSLNVIYNAADFLNKIAFGLIIWAAAMSQPSRSR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTAAAATTGTTTGCTCTTACAGCTGTTGCCCTAATGGGTGTTACAGGTGTAGCAAACGCAGAAACTGTG---TTGTTAGCTTCTGATGATTTTGTTGGAATTTCGTTCTGGCTTGTATCAATGGCTTGTTTAGCAGCAACTGTATTCTTTTTCCTAGAAAGAAGTTCAGTTCCAGCG---GGTTGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTACATGAGAGAAGTATGGATC------------------------------ATGACT---------------------GGTGAGTCGCCAACAGTTTACAGATATATTGACTGG------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---CTGATGTTAGGAACATTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAGGCAGGCAAGCGTGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTT---ACA---GCT---TTC---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTACATTTTTGGTTACCTA---------------------------------------ACAGGTGGAGTAGATGCTAGCTCACTAAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCATTTGGGCAGCAGCTATGAGCCAA---CCTAGTAGATCTAGA------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------MKKLKLFALTAVALMGVTGVANAETV-LLASDDFVGISFWLVSMACLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYIYMREVWI----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDASSLNVIYNAADFLNKIAFGLIIWAAAMSQ-PSRSR------------------------------------ [IV-Alpha8-SAR11/Himb5]_1105155859908 [IV-Alpha8-SAR11/Himb5] JCVI_ORF_1105155859908_GS013_Coastal_3m jcvi|1105155859908| 1105155859908 JCVI ORF 1105155859908 1105155859908 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 19-DEC-2003 Coastal/3m_depth/S_n.a/GS013/Off_Nags_Head/NC/North_American_East_Coast Atlantic Ocean marine 36.003887 -75.39472 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAATTTTCTAAAATTGTTTGCTCTTACAGCTGTTGCCCTAATGGGTGTTACAGGTGTAGCAAACGCAGAAACTGTGTTGTTAGCTTCTGATGATTTTGTTGGAATTTCGTTCTGGCTTGTATCAATGGCTTGTTTAGCAGCAACTGTATTCTTTTTCTTAGAAAGAAGTTCAGTTCCAGCAGGTTGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTATATGAGAGAAGTATGGATCATGACTGGTGAGTCGCCAACAGTTTACAGATATATTGACTGGTTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGACTGATGTTAGGAACATTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAGGCAGGCAAGCGTGCAGCGAAAAGTGGTAACAAAGCACTTGTTACAGCTTTCGGTGCAATGAGAATGATCGTTACAGTAGGTTGGGCTATTTACCCATTAGGTTACATTTTTGGTTACCTAACAGGTGGAGTAGACGCTAGCTCACTAAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTTGGTCTGATCATTTGGGCAGCAGCTATGCAACAACCAGGTAGAGCTGCTAAG MNFLKLFALTAVALMGVTGVANAETVLLASDDFVGISFWLVSMACLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYIYMREVWIMTGESPTVYRYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDASSLNVIYNAADFLNKIAFGLIIWAAAMQQPGRAAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAATTTTCTAAAATTGTTTGCTCTTACAGCTGTTGCCCTAATGGGTGTTACAGGTGTAGCAAACGCAGAAACTGTG---TTGTTAGCTTCTGATGATTTTGTTGGAATTTCGTTCTGGCTTGTATCAATGGCTTGTTTAGCAGCAACTGTATTCTTTTTCTTAGAAAGAAGTTCAGTTCCAGCA---GGTTGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATTTATATGAGAGAAGTATGGATC------------------------------ATGACT---------------------GGTGAGTCGCCAACAGTTTACAGATATATTGACTGG------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---CTGATGTTAGGAACATTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAGGCAGGCAAGCGTGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTT---ACA---GCT---TTC---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTACATTTTTGGTTACCTA---------------------------------------ACAGGTGGAGTAGACGCTAGCTCACTAAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTTGGTCTGATCATTTGGGCAGCAGCTATGCAACAA---CCAGGTAGAGCTGCTAAG--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MNFLKLFALTAVALMGVTGVANAETV-LLASDDFVGISFWLVSMACLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYIYMREVWI----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDASSLNVIYNAADFLNKIAFGLIIWAAAMQQ-PGRAAK----------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926225 [IV-Alpha8-SAR11/Himb5] RHOMEO_AG_OTU5_u10 gb|KJ926225| Uncultured bacterium cloneRHOMEO AG OTU5 u10 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU5 u10 putative proteorhodopsin gene, partial cds KJ926225 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGTTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATATTCTGGAGATTGATGCTTGGTACTCTTGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATTAACGCTACACTTGGTTTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATAAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA WLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWIYILYKVFSGEAGKRAAKSGNKALVTAFGAMRMIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATA------------------------------------TTCTGGAGA---TTGATGCTTGGTACTCTTGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATAAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYKV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926228 [IV-Alpha8-SAR11/Himb5] RHOMEO_AG_OTU5_u3 gb|KJ926228| Uncultured bacterium cloneRHOMEO AG OTU5 u3 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU5 u3 putative proteorhodopsin gene, partial cds KJ926228 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGTTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTAATGCTTGGTACATTAGTAATGCTTATAGGTGGATACCTCGGAGAAGCAGGTTACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTATTTTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA WLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLIGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTAATGCTTGGTACATTAGTAATGCTTATAGGTGGATACCTCGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTA---------------TTT------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926232 [IV-Alpha8-SAR11/Himb5] RHOMEO_AG_OTU5_u7 gb|KJ926232| Uncultured bacterium cloneRHOMEO AG OTU5 u7 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU5 u7 putative proteorhodopsin gene, partial cds KJ926232 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGTTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTAATGCTTGGTACATTAGTAATGCTTATAGGTGGATACCTAGGAGAAGCAGGTTACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTATTTTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA WLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLIGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTAATGCTTGGTACATTAGTAATGCTTATAGGTGGATACCTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTA---------------TTT------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926230 [IV-Alpha8-SAR11/Himb5] RHOMEO_AG_OTU5_u5 gb|KJ926230| Uncultured bacterium cloneRHOMEO AG OTU5 u5 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU5 u5 putative proteorhodopsin gene, partial cds KJ926230 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGTTAATTACAGTGCCATTATTGATGTTAGAATTCTATCTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTAATGCTTGGTACATTAGTAATGCTTATAGGTGGATACCTAGGAGAAGCAGGTTACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA WLITVPLLMLEFYLVLSAVNKADSGIFWRLMLGTLVMLIGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTATCTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTAATGCTTGGTACATTAGTAATGCTTATAGGTGGATACCTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMLEFYLVLSA---V-NKADS-GI------------FWR-LMLGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926234 [IV-Alpha8-SAR11/Himb5] RHOMEO_AG_OTU5_u9 gb|KJ926234| Uncultured bacterium cloneRHOMEO AG OTU5 u9 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU5 u9 putative proteorhodopsin gene, partial cds KJ926234 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGTTAATTACAGTACCATTATTGATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTAATGCTTGGTACACTAGTAATGCTTATAGGTGGATACCTAGGAGAAGCAGGTTACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA WLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLIGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATTACAGTACCATTATTGATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTAATGCTTGGTACACTAGTAATGCTTATAGGTGGATACCTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926224 [IV-Alpha8-SAR11/Himb5] RHOMEO_AG_OTU5 gb|KJ926224| Uncultured bacterium cloneRHOMEO AG OTU5 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU5 putative proteorhodopsin gene, partial cds KJ926224 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGTTAATTACAGTGTCATTATTGATGTTAGAATTCTATTTCGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTAATGCTTGGTACATTAGTAATGCTTATAGGTGGATACCTAGGAGAAGCAGGTTACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAATAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA WLITVSLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLIGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATTACAGTGTCATTATTGATGTTAGAATTCTATTTCGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTAATGCTTGGTACATTAGTAATGCTTATAGGTGGATACCTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAATAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVSLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ203441 [IV-Alpha8-SAR11/Himb5] medHO10A7_env_samples_DQ203441 gi|77547330|gb|DQ203441| Uncultured bacterium clone medHO10A7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10A7 predicted proteorhodopsin gene, partial cds DQ203441 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGTTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCTATTTACCCA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ422376 [IV-Alpha8-SAR11/Himb5] clone_med-50m-b9_DQ422376 gi|90024272|gb|DQ422376| Uncultured bacterium clone med-50m-b9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-b9 putative proteorhodopsin gene, partial cds. DQ422376 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCTATTTACCCA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_1105122433062 [IV-Alpha8-SAR11/Himb5] JCVI_ORF_1105122433062_GS010_Coastal_1m jcvi|1105122433062| 1105122433062 JCVI ORF 1105122433062 1105122433062 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 18-nov-03 Coastal/1m_depth/S_31_psu/GS010/Cape_May/NJ/North_American_East_Coast Atlantic Ocean marine 38.94 -74.685 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TTGCTCTTTACAGCTGTTGCCCTAATGGGTGTTACAGGTGTAGCAAACGCAGAGACCGTTATGTTAGCTCAGGATGATTTCGTTGGTATTTCATTTTGGTTAGTATCAATGGCTTGTTTAGCTGCCACTGTATTCTTTTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATCATGACTGGTGACTCACCAACTGTTTACAGATACATTGACTGGTTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTTATGCTAGTTGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCGGCGAAGAGTGGTAATAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCTATTTACCCATTAGGTTACATTTTTGGTTACCTAACAGGTGGAGTAGACGCTAACTCACTTAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCATTTGGGCAGCAGCAATGCAACAACCTGGTAGAGCTAAG LLFTAVALMGVTGVANAETVMLAQDDFVGISFWLVSMACLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIMTGDSPTVYRYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMQQPGRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTCTTTACAGCTGTTGCCCTAATGGGTGTTACAGGTGTAGCAAACGCAGAGACCGTT---ATGTTAGCTCAGGATGATTTCGTTGGTATTTCATTTTGGTTAGTATCAATGGCTTGTTTAGCTGCCACTGTATTCTTTTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATC------------------------------ATGACT---------------------GGTGACTCACCAACTGTTTACAGATACATTGACTGG------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTTATGCTAGTTGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCGGCGAAG------AGT---GGTAATAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTACATTTTTGGTTACCTA---------------------------------------ACAGGTGGAGTAGACGCTAACTCACTTAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCATTTGGGCAGCAGCAATGCAACAA---CCTGGTAGAGCTAAG------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------LLFTAVALMGVTGVANAETV-MLAQDDFVGISFWLVSMACLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------MT-------GDSPTVYRYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMQQ-PGRAK------------------------------------ [IV-Alpha8-SAR11/Himb5]_1105157005222 [IV-Alpha8-SAR11/Himb5] JCVI_ORF_1105157005222_GS031_Coastal_upwelling_12m jcvi|1105157005222| 1105157005222 JCVI ORF 1105157005222 1105157005222 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 10-FEB-2004 Coastal_upwelling/12m_depth/S_n.a/GS031/Upwelling/Fernandina_Island/Galapagos_Islands Pacific Ocean marine -0.3011111 -91.651665 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCGCTTACAGTTGTAGCCCTAATGGGTGTTACAGGTGTTGCAAACGCAGAGACAGTGATGTTAGCTCAAGATGATTTCGTAGGTATTTCATTTTGGTTAGTATCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAGAGAAGTTCAGTTCCAGCTGGTTGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATCATGACTGGTGATTCACCAACTGTTTACAGATACATTGACTGGTTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCGGCAAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCTATTTACCCATTAGGTTACATTTTTGGTTACCTAACAGGTGGAGTAGATGCTAACTCACTAAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCATTTGGGCAGCAGCAATGCAACAACCTGGTAGAGCTAAG MKKLKLFALTVVALMGVTGVANAETVMLAQDDFVGISFWLVSMACLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIMTGDSPTVYRYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMQQPGRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCGCTTACAGTTGTAGCCCTAATGGGTGTTACAGGTGTTGCAAACGCAGAGACAGTG---ATGTTAGCTCAAGATGATTTCGTAGGTATTTCATTTTGGTTAGTATCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAGAGAAGTTCAGTTCCAGCT---GGTTGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATC------------------------------ATGACT---------------------GGTGATTCACCAACTGTTTACAGATACATTGACTGG------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCGGCAAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTACATTTTTGGTTACCTA---------------------------------------ACAGGTGGAGTAGATGCTAACTCACTAAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCATTTGGGCAGCAGCAATGCAACAA---CCTGGTAGAGCTAAG------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------MKKLKLFALTVVALMGVTGVANAETV-MLAQDDFVGISFWLVSMACLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------MT-------GDSPTVYRYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMQQ-PGRAK------------------------------------ [IV-Alpha8-SAR11/Himb5]_EF616637 [IV-Alpha8-SAR11/Himb5] Bacterium_HTCC8038_EF616637 gi|157502960|gb|EF616637| Bacterium HTCC8038 putative proteorhodopsin gene, partial cds. Bacterium HTCC8038 putative proteorhodopsin gene, partial cds. EF616637 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [#na] taxon:466026 genomic DNA strain 14-mars-08 #na Oregon coast station NH-5, 10 m depth Pacific Ocean marine 44.65167 -124.277 Improvements of high-throughput culturing yielded novel SAR11 strains and other abundant marine bacteria from the Oregon coast and the Bermuda Atlantic Time Series study site Stingl,U., Tripp,H.J. and Giovannoni,S.J. ISME J 1 (4), 361-371 (2007) 18043647 #na GGTGTTACAGGTGTAGCAAACGCAGAGACCGTTATGTTAGCTCAGGATGATTTCGTTGGTATTTCATTTTGGTTAGTATCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATCATGACTGGCGACTCACCAACTGTTTACAGATACATTGACTGGTTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACACTAGTTATGCTAGTTGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCGGCGAAGAGTGGTAATAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGCTGG GVTGVANAETVMLAQDDFVGISFWLVSMACLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIMTGDSPTVYRYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTVGW ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGTTACAGGTGTAGCAAACGCAGAGACCGTT---ATGTTAGCTCAGGATGATTTCGTTGGTATTTCATTTTGGTTAGTATCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATC------------------------------ATGACT---------------------GGCGACTCACCAACTGTTTACAGATACATTGACTGG------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACACTAGTTATGCTAGTTGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCGGCGAAG------AGT---GGTAATAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGCTGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------GVTGVANAETV-MLAQDDFVGISFWLVSMACLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------MT-------GDSPTVYRYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW--------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_1105138003182 [IV-Alpha8-SAR11/Himb5] JCVI_ORF_1105138003182_GS006_Estuary_1m jcvi|1105138003182| 1105138003182 JCVI ORF 1105138003182 1105138003182 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 23-AUG-2003 Estuary/1m_depth/S_n.a/GS006/Bay_of_Fundy/Nova_Scotia/North_American_East_Coast Atlantic Ocean marine 45.111668 -64.94666 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCTCTTACAGCTGTTGCCCTAATGGGTGCTACAGGTGTAGCAAACGCAGAGACCGTTATGTTAGCTCAGGATGATTTCGTTGGTATTTCATTTTGGTTAGTATCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATCATGACTGGCGACTCACCAACTGTTTACAGATACATTGACTGGTTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACACTAGTTATGCTAGTTGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCGGCGAAGAGTGGTAATAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCTATTTACCCATTAGGTTACATTTTTGGTTACCTAACAGGTGGAGTAGACGCTAACTCACTTAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCATTTGGGCAGCAGCCATGCAACAACCAGGTAGAGCTAAG MKKLKLFALTAVALMGATGVANAETVMLAQDDFVGISFWLVSMACLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIMTGDSPTVYRYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMQQPGRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCTCTTACAGCTGTTGCCCTAATGGGTGCTACAGGTGTAGCAAACGCAGAGACCGTT---ATGTTAGCTCAGGATGATTTCGTTGGTATTTCATTTTGGTTAGTATCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATC------------------------------ATGACT---------------------GGCGACTCACCAACTGTTTACAGATACATTGACTGG------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACACTAGTTATGCTAGTTGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCGGCGAAG------AGT---GGTAATAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTACATTTTTGGTTACCTA---------------------------------------ACAGGTGGAGTAGACGCTAACTCACTTAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCATTTGGGCAGCAGCCATGCAACAA---CCAGGTAGAGCTAAG------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------MKKLKLFALTAVALMGATGVANAETV-MLAQDDFVGISFWLVSMACLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------MT-------GDSPTVYRYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMQQ-PGRAK------------------------------------ [IV-Alpha8-SAR11/Himb5]_1105098858352 [IV-Alpha8-SAR11/Himb5] JCVI_ORF_1105098858352_GS002_Coastal_1m jcvi|1105098858352| 1105098858352 JCVI ORF 1105098858352 1105098858352 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 21-AUG-2003 Coastal/1m_depth/S_29.2_psu/GS002/Gulf_of_Maine/North_American_East_Coast Atlantic Ocean marine 42.503056 -67.24 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCTCTTACAGCTGTTGCCCTAATGGGTGTTACAGGTGTAGCAAACGCAGAGACCGTTATGTTAGCTCAAGATGATTTCGTTGGTATTTCATTTTGGTTAGTATCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATCATGACTGGCGACTCACCAACTGTTTACAGATACATTGACTGGTTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACACTAGTTATGCTAGTTGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCGGCGAAGAGTGGTAATAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCTATTTACCCATTAGGTTACATTTTTGGTTACCTAACAGGTGGAGTAGACGCTAACTCACTTAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCATTTGGGCAGCAGCTATGCAACAACCAGGTAGAGCTAAG MKKLKLFALTAVALMGVTGVANAETVMLAQDDFVGISFWLVSMACLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIMTGDSPTVYRYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMQQPGRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCTCTTACAGCTGTTGCCCTAATGGGTGTTACAGGTGTAGCAAACGCAGAGACCGTT---ATGTTAGCTCAAGATGATTTCGTTGGTATTTCATTTTGGTTAGTATCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATC------------------------------ATGACT---------------------GGCGACTCACCAACTGTTTACAGATACATTGACTGG------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACACTAGTTATGCTAGTTGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCGGCGAAG------AGT---GGTAATAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTACATTTTTGGTTACCTA---------------------------------------ACAGGTGGAGTAGACGCTAACTCACTTAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCATTTGGGCAGCAGCTATGCAACAA---CCAGGTAGAGCTAAG------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------MKKLKLFALTAVALMGVTGVANAETV-MLAQDDFVGISFWLVSMACLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------MT-------GDSPTVYRYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMQQ-PGRAK------------------------------------ [IV-Alpha8-SAR11/Himb5]_EU079248 [IV-Alpha8-SAR11/Himb5] clone_B_Mtd1_021_EU079248 gi|156106655|gb|EU079248| Uncultured organism clone B Mtd1 021 putative proteorhodopsin gene, partial cds. Uncultured organism clone B Mtd1 021 putative proteorhodopsin gene, partial cds. EU079248 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; na light-energy conversion (ion transport) unknown [unclassified sequences/environmental samples] taxon:155900 genomic DNA other 27-FEB-2008 #na Sargasso Sea surface water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99-109 (2008) 18211270 #na GGATATTTAGGTGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCGGCGAAGAGTGGTAATAAATCACTTATAACTGCTTTTGGTGCAATGAGAATGATTGTTACAATTGGTTGGGC GYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLITAFGAMRMIVTIGW ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGATATTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCGGCGAAG------AGT---GGTAATAAATCACTT---ATA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAATT---------------------------------------------------------------GGTTGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-I-T-A-F-G-AM-RMIVTI---------------------GW--------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ903164 [IV-Alpha8-SAR11/Himb5] clone_HB10041_DQ903164 gi|116294057|gb|DQ903164| Uncultured bacterium clone HB10041 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone HB10041 putative proteorhodopsin gene, partial cds. DQ903164 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na East China Sea surface water (ECS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na GTATTAGCGGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATCATGACTGGCGACTCACCAACTGTTTACAGATACATTGACTGGTTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACACTAGTTATGCTAGTTGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCGGCGAAGAGTGGTAATAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGACCGTTACAGTAGGTTGGGCCATCTATCCA VLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIMTGDSPTVYRYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMTVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATC------------------------------ATGACT---------------------GGCGACTCACCAACTGTTTACAGATACATTGACTGG------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACACTAGTTATGCTAGTTGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCGGCGAAG------AGT---GGTAATAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGACCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------VLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------MT-------GDSPTVYRYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMTVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_EU224292 [IV-Alpha8-SAR11/Himb5] clone_1812225_EU224292 gi|164698756|gb|EU224292| Uncultured bacterium clone 1812225 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 1812225 putative proteorhodopsin gene, partial cds. EU224292 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2008 #na surface water sample Indian Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGGTGGCCGCTACTGCGTTCTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGACGTATGGATCATGACTGGTGACTCACCAACTGTTTACAGATACATTGACTGGTTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACACTAGTTATGCTAGTTGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGTAGGTAAGAGAGCGGCGAAGAGTGGTAATAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGCTGGGCGATCTATCCA MVAATAFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIMTGDSPTVYRYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEVGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCGTTCTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGACGTATGGATC------------------------------ATGACT---------------------GGTGACTCACCAACTGTTTACAGATACATTGACTGG------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACACTAGTTATGCTAGTTGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGTAGGTAAGAGAGCGGCGAAG------AGT---GGTAATAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGCTGG---------GCGATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------MT-------GDSPTVYRYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEVGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ903165 [IV-Alpha8-SAR11/Himb5] clone_HB10042_DQ903165 gi|116294059|gb|DQ903165| Uncultured bacterium clone HB10042 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone HB10042 putative proteorhodopsin gene, partial cds. DQ903165 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na East China Sea surface water (ECS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na GTATTAGCGGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATCATGACTGGTGACTCACCAACTGTTTACAGATACATTGACTGGTTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACACTAGTTATGCTAGTTGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCGGCGAAGAGTGGTAATAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATAATCGTTACTGTAGGATGGGCCATATACCCA VLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIMTGDSPTVYRYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRIIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATC------------------------------ATGACT---------------------GGTGACTCACCAACTGTTTACAGATACATTGACTGG------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACACTAGTTATGCTAGTTGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCGGCGAAG------AGT---GGTAATAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATAATCGTTACTGTA---------------------------------------------------------------GGATGG---------GCCATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------VLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------MT-------GDSPTVYRYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RIIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ903173 [IV-Alpha8-SAR11/Himb5] clone_HB10091_DQ903173 gi|116294075|gb|DQ903173| Uncultured bacterium clone HB10091 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone HB10091 putative proteorhodopsin gene, partial cds. DQ903173 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na East China Sea surface water (ECS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na CTATTAGCGGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTATATGAGAGATGTATGGATCATGACTGGTGACTCACCAACTGTCTACAGATACATTGACTGGTTAATCACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTTATGCTAGTTGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCGGCGAAGAGTGGTAATAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACTGTAGGTTGGGCCATTTACCCA LLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIMTGDSPTVYRYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTATATGAGAGATGTATGGATC------------------------------ATGACT---------------------GGTGACTCACCAACTGTCTACAGATACATTGACTGG------------------------TTAATCACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTTATGCTAGTTGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCGGCGAAG------AGT---GGTAATAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------MT-------GDSPTVYRYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ903152 [IV-Alpha8-SAR11/Himb5] clone_HB10005_DQ903152 gi|116294033|gb|DQ903152| Uncultured bacterium clone HB10005 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone HB10005 putative proteorhodopsin gene, partial cds. DQ903152 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na East China Sea surface water (ECS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na CTATTAGCGGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATCATGACTGGTGACTCACCAACTGTTTACAGATACATTGACTGGTTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACACTAGTTATGCTAGTTGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCGGCGAAGAGTGGTAATAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGCTGGGCTATCTACCCA LLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIMTGDSPTVYRYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATC------------------------------ATGACT---------------------GGTGACTCACCAACTGTTTACAGATACATTGACTGG------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACACTAGTTATGCTAGTTGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCGGCGAAG------AGT---GGTAATAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGCTGG---------GCTATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------MT-------GDSPTVYRYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ903161 [IV-Alpha8-SAR11/Himb5] clone_HB10033_DQ903161 gi|116294051|gb|DQ903161| Uncultured bacterium clone HB10033 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone HB10033 putative proteorhodopsin gene, partial cds. DQ903161 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na East China Sea surface water (ECS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na CTATTAGCGGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATCATGACTGGTGACTCACCAACTGTTTACAGATACATTGACTGGTTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACACTAGTTATGCTAGTTGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCGGCGAAGAGTGGTAATAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGCTGGGCTATCTACCCA LLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIMTGDSPTVYRYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATC------------------------------ATGACT---------------------GGTGACTCACCAACTGTTTACAGATACATTGACTGG------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACACTAGTTATGCTAGTTGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCGGCGAAG------AGT---GGTAATAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGCTGG---------GCTATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------MT-------GDSPTVYRYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926227 [IV-Alpha8-SAR11/Himb5] RHOMEO_AG_OTU5_u2 gb|KJ926227| Uncultured bacterium cloneRHOMEO AG OTU5 u2 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU5 u2 putative proteorhodopsin gene, partial cds KJ926227 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGTTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACACTAGTTATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCGGCGAAGAGTGGTAATAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA WLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACACTAGTTATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCGGCGAAG------AGT---GGTAATAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926231 [IV-Alpha8-SAR11/Himb5] RHOMEO_AG_OTU5_u6 gb|KJ926231| Uncultured bacterium cloneRHOMEO AG OTU5 u6 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU5 u6 putative proteorhodopsin gene, partial cds KJ926231 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGTTAATTACAGTGCCACTACTAAAGTTAGAATTCTATTTTGTTCTTTCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTAATGCTTGGTACACTTGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAGAGTGGTAATAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA WLITVPLLKLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATTACAGTGCCACTACTAAAGTTAGAATTCTATTTTGTTCTTTCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTAATGCTTGGTACACTTGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAG------AGT---GGTAATAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLKLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_EF616639 [IV-Alpha8-SAR11/Himb5] Bacterium_HTCC8045_EF616639 gi|157502963|gb|EF616639| Bacterium HTCC8045 putative proteorhodopsin-like gene, partial sequence. Bacterium HTCC8045 putative proteorhodopsin-like gene, partial sequence. EF616639 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [#na] taxon:466033 genomic DNA strain 14-mars-08 #na Oregon coast station NH-5, 10 m depth Pacific Ocean marine 44.65167 -124.277 Improvements of high-throughput culturing yielded novel SAR11 strains and other abundant marine bacteria from the Oregon coast and the Bermuda Atlantic Time Series study site Stingl,U., Tripp,H.J. and Giovannoni,S.J. ISME J 1 (4), 361-371 (2007) 18043647 #na GCAGAGACAGTGATGTTAGCTCAAGATGATTTCGTAGGTATTTCATTTTGGTTAGTATCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAAAGAAGTTCAGTTCCAGCTGGTTGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATCATGACTGGTGACTCACCAACTGTTTACAGATACATTGACTGGTTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACAATAGTAATGCTAGTAGGGGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAATAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACTGTAGGTTGGC AETVMLAQDDFVGISFWLVSMACLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIMTGDSPTVYRYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTIVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTVGW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGAGACAGTG---ATGTTAGCTCAAGATGATTTCGTAGGTATTTCATTTTGGTTAGTATCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAAAGAAGTTCAGTTCCAGCT---GGTTGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATC------------------------------ATGACT---------------------GGTGACTCACCAACTGTTTACAGATACATTGACTGG------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACAATAGTAATGCTAGTAGGGGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAATAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACTGTA---------------------------------------------------------------GGTTGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------AETV-MLAQDDFVGISFWLVSMACLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------MT-------GDSPTVYRYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTIVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW--------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_1105141924004 [IV-Alpha8-SAR11/Himb5] JCVI_ORF_1105141924004_GS028_Coastal_2m jcvi|1105141924004| 1105141924004 JCVI ORF 1105141924004 1105141924004 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 04-FEB-2004 Coastal/2m_depth/S_n.a/GS028/Coastal_Floreana/Galapagos_Islands Pacific Ocean marine -1.2169445 -90.319725 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCGCTTACAGCTGTAGCCCTAATGGGTATTACAGGTGTTGCAAACGCAGAGACAGTGATGTTAGCTCAAGATGATTTCGTAGGTATTTCATTTTGGTTAGTATCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAAAGAAGTTCAGTTCCAGCTGGTTGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATCATGACTGGTGACTCACCAACTGTTTACAGATACATTGACTGGTTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGGATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCTATTTACCCATTAGGTTACATTTTTGGTTACCTAACAGGTGGAGTAGACGCTAACTCACTTAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCATTTGGGCAGCAGCAATGCAACAACCTGGTAGAGCTAAG MKKLKLFALTAVALMGITGVANAETVMLAQDDFVGISFWLVSMACLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIMTGDSPTVYRYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMQQPGRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCGCTTACAGCTGTAGCCCTAATGGGTATTACAGGTGTTGCAAACGCAGAGACAGTG---ATGTTAGCTCAAGATGATTTCGTAGGTATTTCATTTTGGTTAGTATCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAAAGAAGTTCAGTTCCAGCT---GGTTGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATC------------------------------ATGACT---------------------GGTGACTCACCAACTGTTTACAGATACATTGACTGG------------------------TTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGGATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTACATTTTTGGTTACCTA---------------------------------------ACAGGTGGAGTAGACGCTAACTCACTTAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCATTTGGGCAGCAGCAATGCAACAA---CCTGGTAGAGCTAAG------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------MKKLKLFALTAVALMGITGVANAETV-MLAQDDFVGISFWLVSMACLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------MT-------GDSPTVYRYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMQQ-PGRAK------------------------------------ [IV-Alpha8-SAR11/Himb5]_1105144582714 [IV-Alpha8-SAR11/Himb5] JCVI_ORF_1105144582714_GS027_Coastal_3m jcvi|1105144582714| 1105144582714 JCVI ORF 1105144582714 1105144582714 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 04-FEB-2004 Coastal/3m_depth/S_34.9_psu/GS027/Devils_Crown/Floreana_Island/Galapagos_Islands Pacific Ocean marine -1.2161111 -90.422775 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCGCTTACAGCTGTAGCCCTAATGGGTGTTACAGGTGTTGCAAACGCAGAGACAGTGATGTTAGCTCAAGATGATTTCGTAGGTATTTCATTTTGGTTAGTATCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAAAGAAGTTCAGTTCCAGCTGGTTGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATCATGACTGGTGACTCACCAACTGTTTACAGATACATTGACTGGTTAATTACAGTGCCATTACTAATGCTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCTATTTACCCATTAGGTTACATTTTTGGTTACCTAACAGGTGGAGTAGATGCTAACTCACTTAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCATTTGGGCAGCAGCAATGCAACAACCTGGTAGAGCTAAG MKKLKLFALTAVALMGVTGVANAETVMLAQDDFVGISFWLVSMACLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIMTGDSPTVYRYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMQQPGRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCGCTTACAGCTGTAGCCCTAATGGGTGTTACAGGTGTTGCAAACGCAGAGACAGTG---ATGTTAGCTCAAGATGATTTCGTAGGTATTTCATTTTGGTTAGTATCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAAAGAAGTTCAGTTCCAGCT---GGTTGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATC------------------------------ATGACT---------------------GGTGACTCACCAACTGTTTACAGATACATTGACTGG------------------------TTAATTACAGTGCCATTACTAATGCTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTACATTTTTGGTTACCTA---------------------------------------ACAGGTGGAGTAGATGCTAACTCACTTAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCATTTGGGCAGCAGCAATGCAACAA---CCTGGTAGAGCTAAG------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------MKKLKLFALTAVALMGVTGVANAETV-MLAQDDFVGISFWLVSMACLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------MT-------GDSPTVYRYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMQQ-PGRAK------------------------------------ [IV-Alpha8-SAR11/Himb5]_1105137958398 [IV-Alpha8-SAR11/Himb5] JCVI_ORF_1105137958398_GS009_Coastal_1m jcvi|1105137958398| 1105137958398 JCVI ORF 1105137958398 1105137958398 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 17-nov-03 Coastal/1m_depth/S_31_psu/GS009/Block_Island/NY/North_American_East_Coast Atlantic Ocean marine 41.09111 -71.60222 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCGCTTACAGCTGTAGCCCTAATGGGTGTTACAGGTGTTGCAAACGCAGAGACAGTGATGTTAGCTCAGGATGATTTCGTTGGTATTTCATTTTGGTTAGTATCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAAAGAAGTTCAGTTCCAGCTGGTTGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCGTTCGTACACTACATGTACATGAGAGATGTATGGATCATGACTGGTGACTCACCAACTGTATACAGATACATTGACTGGTTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAGGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCTATTTACCCATTAGGTTACATTTTTGGTTACCTAACAGGTGGTGTAGATGCTAACTCACTAAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCATTTGGGCAGCAGCAATGCAACAACCTGGTAGAGCTAAG MKKLKLFALTAVALMGVTGVANAETVMLAQDDFVGISFWLVSMACLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIMTGDSPTVYRYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMQQPGRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCGCTTACAGCTGTAGCCCTAATGGGTGTTACAGGTGTTGCAAACGCAGAGACAGTG---ATGTTAGCTCAGGATGATTTCGTTGGTATTTCATTTTGGTTAGTATCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAAAGAAGTTCAGTTCCAGCT---GGTTGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCGTTCGTACACTACATGTACATGAGAGATGTATGGATC------------------------------ATGACT---------------------GGTGACTCACCAACTGTATACAGATACATTGACTGG------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAGGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTACATTTTTGGTTACCTA---------------------------------------ACAGGTGGTGTAGATGCTAACTCACTAAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCATTTGGGCAGCAGCAATGCAACAA---CCTGGTAGAGCTAAG------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------MKKLKLFALTAVALMGVTGVANAETV-MLAQDDFVGISFWLVSMACLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------MT-------GDSPTVYRYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMQQ-PGRAK------------------------------------ [IV-Alpha8-SAR11/Himb5]_1105126569556 [IV-Alpha8-SAR11/Himb5] JCVI_ORF_1105126569556_GS013_Coastal_3m jcvi|1105126569556| 1105126569556 JCVI ORF 1105126569556 1105126569556 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 19-DEC-2003 Coastal/3m_depth/S_n.a/GS013/Off_Nags_Head/NC/North_American_East_Coast Atlantic Ocean marine 36.003887 -75.39472 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCACTTACAGCTGTAGCCCTAATGGGTGTTACAGGTGTTGCAAACGCAGAGACAGTGATGTTAGCTCAAGATGATTTCGTAGGTATTTCATTTTGGTTAGTATCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATCATGACTGGCGACTCACCAACTGTTTACAGATACATTGACTGGTTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAATAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCTATTTACCCATTAGGTTACATTTTTGGTTACCTAACAGGTGGAGTAGACGCTAAAACACTAAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCATTGGCCTCAAC MKKLKLFALTAVALMGVTGVANAETVMLAQDDFVGISFWLVSMACLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIMTGDSPTVYRYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDAKTLNVIYNAADFLNKIAFGLIIGLN ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCACTTACAGCTGTAGCCCTAATGGGTGTTACAGGTGTTGCAAACGCAGAGACAGTG---ATGTTAGCTCAAGATGATTTCGTAGGTATTTCATTTTGGTTAGTATCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATC------------------------------ATGACT---------------------GGCGACTCACCAACTGTTTACAGATACATTGACTGG------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAATAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTACATTTTTGGTTACCTA---------------------------------------ACAGGTGGAGTAGACGCTAAAACACTAAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCATTGGCCTCAAC------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------MKKLKLFALTAVALMGVTGVANAETV-MLAQDDFVGISFWLVSMACLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------MT-------GDSPTVYRYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDAKTLNVIYNAADFLNKIAFGLIIGLN---------------------------------------------- [IV-Alpha8-SAR11/Himb5]_1105119797162 [IV-Alpha8-SAR11/Himb5] JCVI_ORF_1105119797162_GS032_Mangrove_1m jcvi|1105119797162| 1105119797162 JCVI ORF 1105119797162 1105119797162 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 11-FEB-2004 Mangrove/1m_depth/S_n.a/GS032/Mangrove_on_Isabella_Island/Galapagos_Islands Pacific Ocean marine -0.5938889 -91.06944 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCGCTTACAGCTGTAGCCCTAATGGGTGTTACAGGTGTTGCAAACGCAGAGACAGTGATGTTAGCTCAAGATGATTTCGTAGGTATTTCATTTTGGTTAGTATCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAAAGAAGTTCAGTTCCAGCTGGTTGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATCATGACTGGTGACTCACCAACTGTTTACAGATACATTGACTGGTTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAATAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCTATTTACCCATTAGGTTACATTTTTGGTTACCTAACAGGTGGAGTAGATGCTAACTCACTTAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTTGGTCTTATCATTTGGGCAGCAGCAATGCAACAACCTGGTAAGGAGCGAAAGGAAGTTGAACTAGAAATGTCAAATCACAGGGGCTAC MKKLKLFALTAVALMGVTGVANAETVMLAQDDFVGISFWLVSMACLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIMTGDSPTVYRYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMQQPGKERKEVELEMSNHRGY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCGCTTACAGCTGTAGCCCTAATGGGTGTTACAGGTGTTGCAAACGCAGAGACAGTGATGTTAGCTCAAGATGATTTCGTAGGTATTTCATTTTGGTTAGTATCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAAAGAAGTTCAGTTCCAGCTGGTTGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATCATGACTGGTGACTCACCAACTGTTTACAGATACATTGACTGG------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAATAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTACATTTTTGGTTACCTAACAGGTGGAGTAGATGCTAACTCACTTAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTTGGTCTTATCATTTGGGCAGCAGCAATGCAACAACCTGGTAAGGAGCGAAAGGAAGTTGAACTAGAAATGTCAAATCACAGGGGCTAC--------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------MKKLKLFALTAVALMGVTGVANAETVMLAQDDFVGISFWLVSMACLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIMTGDSPTVYRYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYLTGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMQQPGKERKEVELEMSNHRGY------------------------------------- [IV-Alpha8-SAR11/Himb5]_1105113053244 [IV-Alpha8-SAR11/Himb5] JCVI_ORF_1105113053244_GS009_Coastal_1m jcvi|1105113053244| 1105113053244 JCVI ORF 1105113053244 1105113053244 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 17-nov-03 Coastal/1m_depth/S_31_psu/GS009/Block_Island/NY/North_American_East_Coast Atlantic Ocean marine 41.09111 -71.60222 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCGCTTACAGCTGTAGCCCTAATGGGTGTTACAGGTGTTGCAAACGCAGAGACAGTGATGTTAGCTCAGGATGATTTCGTTGGTATTTCATTTTGGTTAGTATCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAAAGAAGTTCAGTTCCAGCTGGTTGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCGTTCGTACACTACATGTACATGAGAGATGTATGGATCATGACTGGTGACTCACCAACTGTATACAGATACATTGACTGGTTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAGGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCTATTTACCCATTAGGTTACATTTTTGGTTACCTAACAGGTGGTGTAGATGCTAACTCACTAAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCATTTGGGCAGCAGCAATGCAACAACCTGGTAGAGCTAAG MKKLKLFALTAVALMGVTGVANAETVMLAQDDFVGISFWLVSMACLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIMTGDSPTVYRYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMQQPGRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCGCTTACAGCTGTAGCCCTAATGGGTGTTACAGGTGTTGCAAACGCAGAGACAGTG---ATGTTAGCTCAGGATGATTTCGTTGGTATTTCATTTTGGTTAGTATCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAAAGAAGTTCAGTTCCAGCT---GGTTGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCGTTCGTACACTACATGTACATGAGAGATGTATGGATC------------------------------ATGACT---------------------GGTGACTCACCAACTGTATACAGATACATTGACTGG------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAGGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTACATTTTTGGTTACCTA---------------------------------------ACAGGTGGTGTAGATGCTAACTCACTAAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCATTTGGGCAGCAGCAATGCAACAA---CCTGGTAGAGCTAAG------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------MKKLKLFALTAVALMGVTGVANAETV-MLAQDDFVGISFWLVSMACLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------MT-------GDSPTVYRYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMQQ-PGRAK------------------------------------ [IV-Alpha8-SAR11/Himb5]_EF616640 [IV-Alpha8-SAR11/Himb5] Bacterium_HTCC8046_EF616640 gi|157502964|gb|EF616640| Bacterium HTCC8046 putative proteorhodopsin gene, partial cds. Bacterium HTCC8046 putative proteorhodopsin gene, partial cds. EF616640 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [#na] taxon:466034 genomic DNA strain 14-mars-08 #na Oregon coast station NH-5, 10 m depth Pacific Ocean marine 44.65167 -124.277 Improvements of high-throughput culturing yielded novel SAR11 strains and other abundant marine bacteria from the Oregon coast and the Bermuda Atlantic Time Series study site Stingl,U., Tripp,H.J. and Giovannoni,S.J. ISME J 1 (4), 361-371 (2007) 18043647 #na GGTGTTACAGGTGTTGCAAACGCAGAGACAGTGATGTTAGCTCAAGATGATTTCGTAGGTATTTCATTTTGGTTAGTATCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAAAGAAGTTCAGTTCCAGCTGGTTGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATCATGACTGGTGATTCACCAACTGTTTACAGATACATTGACTGGTTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAATAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCCTTCTA GVTGVANAETVMLAQDDFVGISFWLVSMACLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIMTGDSPTVYRYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGTTACAGGTGTTGCAAACGCAGAGACAGTG---ATGTTAGCTCAAGATGATTTCGTAGGTATTTCATTTTGGTTAGTATCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAAAGAAGTTCAGTTCCAGCT---GGTTGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATC------------------------------ATGACT---------------------GGTGATTCACCAACTGTTTACAGATACATTGACTGG------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAATAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------GVTGVANAETV-MLAQDDFVGISFWLVSMACLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------MT-------GDSPTVYRYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AF---------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_1105080656702 [IV-Alpha8-SAR11/Himb5] JCVI_ORF_1105080656702_GS011_Estuary_1m jcvi|1105080656702| 1105080656702 JCVI ORF 1105080656702 1105080656702 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 18-nov-03 Estuary/1m_depth/S_n.a/GS011/Delaware_Bay/NJ/North_American_East_Coast Atlantic Ocean marine 39.417778 -75.504166 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCGCTTACAGCTGTAGCCCTAATGGGTGTTACAGGTGTTGCAAACGCAGAGACAGTGATGTTAGCTCAAGATGATTTCGTAGGTATTTCATTTTGGTTAGTATCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAAAGAAGTTCAGTTCCAGCTGGTTGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATCATGACTGGTGATTCACCAACTGTTTACAGATACATTGACTGGTTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAATAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCTATTTACCCATTAGGTTACATTTTTGGTTACCTAACAGGTGGAGTAGACGCTAACTCACTTAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCATTTGGGCAGCAGCAATGCAACAACCTGGTAGAGCTAAG MKKLKLFALTAVALMGVTGVANAETVMLAQDDFVGISFWLVSMACLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIMTGDSPTVYRYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMQQPGRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCGCTTACAGCTGTAGCCCTAATGGGTGTTACAGGTGTTGCAAACGCAGAGACAGTG---ATGTTAGCTCAAGATGATTTCGTAGGTATTTCATTTTGGTTAGTATCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAAAGAAGTTCAGTTCCAGCT---GGTTGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATC------------------------------ATGACT---------------------GGTGATTCACCAACTGTTTACAGATACATTGACTGG------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAATAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTACATTTTTGGTTACCTA---------------------------------------ACAGGTGGAGTAGACGCTAACTCACTTAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCATTTGGGCAGCAGCAATGCAACAA---CCTGGTAGAGCTAAG------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------MKKLKLFALTAVALMGVTGVANAETV-MLAQDDFVGISFWLVSMACLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------MT-------GDSPTVYRYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMQQ-PGRAK------------------------------------ [IV-Alpha8-SAR11/Himb5]_EF616641 [IV-Alpha8-SAR11/Himb5] Bacterium_HTCC8047_EF616641 gi|157502966|gb|EF616641| Bacterium HTCC8047 putative proteorhodopsin-like gene, partial sequence. Bacterium HTCC8047 putative proteorhodopsin-like gene, partial sequence. EF616641 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [#na] taxon:466035 genomic DNA strain 14-mars-08 #na Oregon coast station NH-5, 10 m depth Pacific Ocean marine 44.65167 -124.277 Improvements of high-throughput culturing yielded novel SAR11 strains and other abundant marine bacteria from the Oregon coast and the Bermuda Atlantic Time Series study site Stingl,U., Tripp,H.J. and Giovannoni,S.J. ISME J 1 (4), 361-371 (2007) 18043647 #na GAGACAGTGATGTTAGCTCAAGATGATTTCGTTGGTATTTCATTTTGGTTAGTATCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAAAGAAGTTCAGTTCCAGCTGGTTGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATCATGACTGGTGATTCACCAACTGTTTACAGATACATTGACTGGTTAATTACAGTACCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGACTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAGTCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCCA ETVMLAQDDFVGISFWLVSMACLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIMTGDSPTVYRYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTVGWA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGACAGTG---ATGTTAGCTCAAGATGATTTCGTTGGTATTTCATTTTGGTTAGTATCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAAAGAAGTTCAGTTCCAGCT---GGTTGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATC------------------------------ATGACT---------------------GGTGATTCACCAACTGTTTACAGATACATTGACTGG------------------------TTAATTACAGTACCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGACTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAGTCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------ETV-MLAQDDFVGISFWLVSMACLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------MT-------GDSPTVYRYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_EF616643 [IV-Alpha8-SAR11/Himb5] Bacterium_HTCC8051_EF616643 gi|157502968|gb|EF616643| Bacterium HTCC8051 putative proteorhodopsin gene, partial cds. Bacterium HTCC8051 putative proteorhodopsin gene, partial cds. EF616643 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Alphaproteobacteria/SAR11 cluster/Candidatus Pelagibacter] taxon:466038 genomic DNA strain 14-mars-08 #na Oregon coast station NH-5, 10 m depth Pacific Ocean marine 44.65167 -124.277 Improvements of high-throughput culturing yielded novel SAR11 strains and other abundant marine bacteria from the Oregon coast and the Bermuda Atlantic Time Series study site Stingl,U., Tripp,H.J. and Giovannoni,S.J. ISME J 1 (4), 361-371 (2007) 18043647 #na GCAGAGACAGTGATGTTAGCTCAAGATGATTTCGTTGGTATTTCATTTTGGTTAGTATCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAAAGAAGTTCAGTTCCAGCTGGTTGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATCATGACTGGTGATTCACCAACTGTTTACAGATACATTGACTGGTTAATTACAGTGCCATTACTGATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGACTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAGTCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGTTGGCT AETVMLAQDDFVGISFWLVSMACLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIMTGDSPTVYRYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTVGW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGAGACAGTG---ATGTTAGCTCAAGATGATTTCGTTGGTATTTCATTTTGGTTAGTATCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAAAGAAGTTCAGTTCCAGCT---GGTTGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATC------------------------------ATGACT---------------------GGTGATTCACCAACTGTTTACAGATACATTGACTGG------------------------TTAATTACAGTGCCATTACTGATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGACTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAGTCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------AETV-MLAQDDFVGISFWLVSMACLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------MT-------GDSPTVYRYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW--------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ422545 [IV-Alpha8-SAR11/Himb5] clone_med-tb04-0m-a2_DQ422545 gi|90024610|gb|DQ422545| Uncultured bacterium clone med-tb04-0m-a2 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-a2 putative proteorhodopsin gene, partial cds. DQ422545 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACTTTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAATAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACTTTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAATAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ422531 [IV-Alpha8-SAR11/Himb5] clone_med-tb04-50m-h10_DQ422531 gi|90024582|gb|DQ422531| Uncultured bacterium clone med-tb04-50m-h10 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-h10 putative proteorhodopsin gene, partial cds. DQ422531 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGCTACATAGACTGGCTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACTTTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAATAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCTATTTATCCA SYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATAGACTGG------------------------CTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACTTTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAATAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ422616 [IV-Alpha8-SAR11/Himb5] clone_med-tb04-0m-g3_DQ422616 gi|90024752|gb|DQ422616| Uncultured bacterium clone med-tb04-0m-g3 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-g3 putative proteorhodopsin gene, partial cds. DQ422616 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACTTTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAATAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACTTTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAATAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ422507 [IV-Alpha8-SAR11/Himb5] clone_med-tb04-50m-f10_DQ422507 gi|90024534|gb|DQ422507| Uncultured bacterium clone med-tb04-50m-f10 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-f10 putative proteorhodopsin gene, partial cds. DQ422507 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATATATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAATAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAATAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ422574 [IV-Alpha8-SAR11/Himb5] clone_med-tb04-0m-c7_DQ422574 gi|90024668|gb|DQ422574| Uncultured bacterium clone med-tb04-0m-c7 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-c7 putative proteorhodopsin gene, partial cds. DQ422574 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTAATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTAATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ422615 [IV-Alpha8-SAR11/Himb5] clone_med-tb04-0m-g2_DQ422615 gi|90024750|gb|DQ422615| Uncultured bacterium clone med-tb04-0m-g2 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-g2 putative proteorhodopsin gene, partial cds. DQ422615 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ422296 [IV-Alpha8-SAR11/Himb5] clone_med-20m-d8_DQ422296 gi|90024112|gb|DQ422296| Uncultured bacterium clone med-20m-d8 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-d8 putative proteorhodopsin gene, partial cds. DQ422296 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ422698 [IV-Alpha8-SAR11/Himb5] clone_med-tb04-20m-f4_DQ422698 gi|90024916|gb|DQ422698| Uncultured bacterium clone med-tb04-20m-f4 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-f4 putative proteorhodopsin gene, partial cds. DQ422698 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGTAATGAGAATGATCGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGVMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GTAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-VM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ422558 [IV-Alpha8-SAR11/Himb5] clone_med-tb04-0m-b3_DQ422558 gi|90024636|gb|DQ422558| Uncultured bacterium clone med-tb04-0m-b3 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-b3 putative proteorhodopsin gene, partial cds. DQ422558 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ422436 [IV-Alpha8-SAR11/Himb5] clone_med-50m-h1_DQ422436 gi|90024392|gb|DQ422436| Uncultured bacterium clone med-50m-h1 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-h1 putative proteorhodopsin gene, partial cds. DQ422436 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ422589 [IV-Alpha8-SAR11/Himb5] clone_med-tb04-0m-e11_DQ422589 gi|90024698|gb|DQ422589| Uncultured bacterium clone med-tb04-0m-e11 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-e11 putative proteorhodopsin gene, partial cds. DQ422589 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGGTACATAGACTGGCTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATAGACTGG------------------------CTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ422633 [IV-Alpha8-SAR11/Himb5] clone_med-tb04-0m-h9_DQ422633 gi|90024786|gb|DQ422633| Uncultured bacterium clone med-tb04-0m-h9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-h9 putative proteorhodopsin gene, partial cds. DQ422633 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ422478 [IV-Alpha8-SAR11/Himb5] clone_med-tb04-50m-c6_DQ422478 gi|90024476|gb|DQ422478| Uncultured bacterium clone med-tb04-50m-c6 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-c6 putative proteorhodopsin gene, partial cds. DQ422478 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCTA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ422370 [IV-Alpha8-SAR11/Himb5] clone_med-50m-b3_DQ422370 gi|90024260|gb|DQ422370| Uncultured bacterium clone med-50m-b3 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-b3 putative proteorhodopsin gene, partial cds. DQ422370 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ422184 [IV-Alpha8-SAR11/Himb5] clone_med-0m-c9_DQ422184 gi|90023888|gb|DQ422184| Uncultured bacterium clone med-0m-c9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-c9 putative proteorhodopsin gene, partial cds. DQ422184 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ422446 [IV-Alpha8-SAR11/Himb5] clone_med-50m-h8_DQ422446 gi|90024412|gb|DQ422446| Uncultured bacterium clone med-50m-h8 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-h8 putative proteorhodopsin gene, partial cds. DQ422446 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ203593 [IV-Alpha8-SAR11/Himb5] medHO120B1_env_samples_DQ203593 gi|77547634|gb|DQ203593| Uncultured bacterium clone medHO120B1 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120B1 predicted proteorhodopsin gene, partial cds DQ203593 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCCATATATCCA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ203631 [IV-Alpha8-SAR11/Himb5] medHO120E9_env_samples_DQ203631 gi|77547710|gb|DQ203631| Uncultured bacterium clone medHO120E9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120E9 predicted proteorhodopsin gene, partial cds DQ203631 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCCATATATCCA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ203350 [IV-Alpha8-SAR11/Himb5] MedHO102A7_env_samples_DQ203350 gi|77547148|gb|DQ203350| Uncultured bacterium clone MedHO102A7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102A7 predicted proteorhodopsin gene, partial cds DQ203350 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGATTGGCTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCCATTTATCCA SYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGATTGG------------------------CTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ203696 [IV-Alpha8-SAR11/Himb5] medHO155D3_env_samples_DQ203696 gi|77547840|gb|DQ203696| Uncultured bacterium clone medHO155D3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155D3 predicted proteorhodopsin gene, partial cds DQ203696 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCCATCTATCCA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ422155 [IV-Alpha8-SAR11/Himb5] clone_med-0m-a3_DQ422155 gi|90023830|gb|DQ422155| Uncultured bacterium clone med-0m-a3 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-a3 putative proteorhodopsin gene, partial cds. DQ422155 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGATTGGCTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ203362 [IV-Alpha8-SAR11/Himb5] MedHO102B9_env_samples_DQ203362 gi|77547172|gb|DQ203362| Uncultured bacterium clone MedHO102B9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102B9 predicted proteorhodopsin gene, partial cds DQ203362 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATATATTGACTGGCTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCCATTTATCCA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATATATTGACTGG------------------------CTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ203551 [IV-Alpha8-SAR11/Himb5] MedHO1202F11_env_samples_DQ203551 gi|77547550|gb|DQ203551| Uncultured bacterium clone MedHO1202F11 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202F11 predicted proteorhodopsin gene, partial cds DQ203551 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGGTACATTGACTGGCTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCCATTTATCCA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTACATTGACTGG------------------------CTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ203345 [IV-Alpha8-SAR11/Himb5] MedHO102A2_env_samples_DQ203345 gi|77547138|gb|DQ203345| Uncultured bacterium clone MedHO102A2 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102A2 predicted proteorhodopsin gene, partial cds DQ203345 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCCATTTATCCA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ203384 [IV-Alpha8-SAR11/Himb5] MedHO102D8_env_samples_DQ203384 gi|77547216|gb|DQ203384| Uncultured bacterium clone MedHO102D8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102D8 predicted proteorhodopsin gene, partial cds DQ203384 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGACTGGCTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCCATTTATCCA SYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGACTGG------------------------CTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ203704 [IV-Alpha8-SAR11/Himb5] medHO155E3_env_samples_DQ203704 gi|77547856|gb|DQ203704| Uncultured bacterium clone medHO155E3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155E3 predicted proteorhodopsin gene, partial cds DQ203704 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGACTGGCTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCCATTTATCCA SYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGACTGG------------------------CTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ203571 [IV-Alpha8-SAR11/Himb5] MedHO1202H10_env_samples_DQ203571 gi|77547590|gb|DQ203571| Uncultured bacterium clone MedHO1202H10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202H10 predicted proteorhodopsin gene, partial cds DQ203571 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGACTGGCTAATCACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCCATTTATCCA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGACTGG------------------------CTAATCACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ203581 [IV-Alpha8-SAR11/Himb5] MedHO1202H9_env_samples_DQ203581 gi|77547610|gb|DQ203581| Uncultured bacterium clone MedHO1202H9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202H9 predicted proteorhodopsin gene, partial cds DQ203581 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGACTGGCTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCCATTTATCCA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGACTGG------------------------CTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ203368 [IV-Alpha8-SAR11/Himb5] MedHO102C4_env_samples_DQ203368 gi|77547184|gb|DQ203368| Uncultured bacterium clone MedHO102C4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102C4 predicted proteorhodopsin gene, partial cds DQ203368 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCCATTTATCCA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ422569 [IV-Alpha8-SAR11/Himb5] clone_med-tb04-0m-c2_DQ422569 gi|90024658|gb|DQ422569| Uncultured bacterium clone med-tb04-0m-c2 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-c2 putative proteorhodopsin gene, partial cds. DQ422569 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCTATTTACCCA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ203487 [IV-Alpha8-SAR11/Himb5] medHO10H5_env_samples_DQ203487 gi|77547422|gb|DQ203487| Uncultured bacterium clone medHO10H5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10H5 predicted proteorhodopsin gene, partial cds DQ203487 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATAGACTGGCTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCCATTTACCCA SYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATAGACTGG------------------------CTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ422595 [IV-Alpha8-SAR11/Himb5] clone_med-tb04-0m-e6_DQ422595 gi|90024710|gb|DQ422595| Uncultured bacterium clone med-tb04-0m-e6 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-e6 putative proteorhodopsin gene, partial cds. DQ422595 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCCATTTACCCA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ203388 [IV-Alpha8-SAR11/Himb5] MedHO102E11_env_samples_DQ203388 gi|77547224|gb|DQ203388| Uncultured bacterium clone MedHO102E11 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102E11 predicted proteorhodopsin gene, partial cds DQ203388 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCCATCTACCCA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ203730 [IV-Alpha8-SAR11/Himb5] medHO155H2_env_samples_DQ203730 gi|77547908|gb|DQ203730| Uncultured bacterium clone medHO155H2 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155H2 predicted proteorhodopsin gene, partial cds DQ203730 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGGTACATTGACTGGCTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCCATCTACCCA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTACATTGACTGG------------------------CTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ203449 [IV-Alpha8-SAR11/Himb5] medHO10B4_env_samples_DQ203449 gi|77547346|gb|DQ203449| Uncultured bacterium clone medHO10B4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10B4 predicted proteorhodopsin gene, partial cds DQ203449 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGACTGGCTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCCATCTACCCA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGACTGG------------------------CTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ203452 [IV-Alpha8-SAR11/Himb5] medHO10B8_env_samples_DQ203452 gi|77547352|gb|DQ203452| Uncultured bacterium clone medHO10B8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10B8 predicted proteorhodopsin gene, partial cds DQ203452 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGACTGGCTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCCATCTACCCA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGACTGG------------------------CTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_EU915949 [IV-Alpha8-SAR11/Himb5] clone_23HO15-16_EU915949 gi|229358780|gb|EU915949| Uncultured bacterium clone 23HO15-16 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 23HO15-16 putative proteorhodopsin gene, partial cds. EU915949 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTATTAGCGGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCAGTACCGGCTGGATGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACATTACATGTACATGAGAGATGTATGGATCGGTGACTCACCAACTGTATACAGATACATTGACTGGTTAATTACAGTACCTTTACTAATGCTTGAGTTCTACTTTGTATTAGCAGCAGTAAAATCAGATTCAGGAATTTTCTGGAGACTGATGATTGGTACATTAGTAATGCTTGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTATGTGAAGTATTCTCTGGTGAAGCAGGTAAAAGAGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACTGTAGGCTGGGCGATCTAC LLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIGDSPTVYRYIDWLITVPLLMLEFYFVLAAVKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILCEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCAGTACCGGCT---GGATGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACATTACATGTACATGAGAGATGTATGGATC---------------------------------------------------------GGTGACTCACCAACTGTATACAGATACATTGACTGG------------------------TTAATTACAGTACCTTTACTAATGCTTGAGTTCTACTTTGTATTAGCAGCA---------GTA------AAATCAGATTCA---GGAATT------------------------------------TTCTGGAGA---CTGATGATTGGTACATTAGTAATGCTTGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTATGTGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAAAGAGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGCTGG---------GCGATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI-------------------GDSPTVYRYIDW--------LITVPLLMLEFYFVLAA---V--KSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILCEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ887777 [IV-Alpha8-SAR11/Himb5] clone_PF10001_DQ887777 gi|116294254|gb|DQ887777| Uncultured bacterium clone PF10001 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF10001 putative proteorhodopsin gene, partial cds. DQ887777 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2007 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGGTCGCCGCTACTGTGTTCTTCTTAGAAAGAAGTTCAGTACCGGCTGGATGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATCATGACTGGTGACTCACCAACTGTATACAGATACATTGACTGGTTAATTACAGTACCTTTACTAATGCTTGAGTTCTACTTTGTATTAGCAGCAGTAAACAAATCAGATTCAGGAATTTTCTGGAGACTGATGATTGGTACATTAGTAATGCTTGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTTGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTATTCTCTGGTGAAGCAGGTAAAAGAGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACTGTAGGCTGGGCAATCTATCCA MVAATVFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIMTGDSPTVYRYIDWLITVPLLMLEFYFVLAAVNKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLCFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCCGCTACTGTGTTCTTCTTAGAAAGAAGTTCAGTACCGGCT---GGATGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATC------------------------------ATGACT---------------------GGTGACTCACCAACTGTATACAGATACATTGACTGG------------------------TTAATTACAGTACCTTTACTAATGCTTGAGTTCTACTTTGTATTAGCAGCA---------GTA---AACAAATCAGATTCA---GGAATT------------------------------------TTCTGGAGA---CTGATGATTGGTACATTAGTAATGCTTGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTTGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAAAGAGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGCTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------MT-------GDSPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLC-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ887785 [IV-Alpha8-SAR11/Himb5] clone_PF10009_DQ887785 gi|116294270|gb|DQ887785| Uncultured bacterium clone PF10009 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF10009 putative proteorhodopsin gene, partial cds. DQ887785 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2007 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na GTATTAGCGGCTACTGTATTCTTCTTCTTAGAAGGAAGTTCAGTACCGGCTGGATGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATCATGACTGGTGACTCACCAACTGTATACAGATACATTGACTGGTTAATTACAGTACCTTTACTAATGCTTGAGTTCTACTTTGTATTAGCAGCAGTAAATAAATCAGATTCAGGAATTTTCTGGAGACTGATGATTGGTACATTAGTAATGCTTGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTATTCTCTGGTGAAGCAGGTAAAGGAGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACTGTAGGGTGGGCAATTTACCCA VLAATVFFFLEGSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIMTGDSPTVYRYIDWLITVPLLMLEFYFVLAAVNKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKGAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGGCTACTGTATTCTTCTTCTTAGAAGGAAGTTCAGTACCGGCT---GGATGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATC------------------------------ATGACT---------------------GGTGACTCACCAACTGTATACAGATACATTGACTGG------------------------TTAATTACAGTACCTTTACTAATGCTTGAGTTCTACTTTGTATTAGCAGCA---------GTA---AATAAATCAGATTCA---GGAATT------------------------------------TTCTGGAGA---CTGATGATTGGTACATTAGTAATGCTTGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAAGGAGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGGTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------VLAATVFFFLEGSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------MT-------GDSPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKGAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_EU915750 [IV-Alpha8-SAR11/Himb5] PF75079_env_samples_EU915750 gi|229358382|gb|EU915750| Uncultured microorganism clone PF75079 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF75079 putative proteorhodopsin gene, partial cds EU915750 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTATTAGCGGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCAGTACCGGCTGGATGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACATTACATGTACATGAGAGATGTATGGATCATGACTGGTGACTCACCAACTGTATACAGATACATTGACTGGTTAATTACAGTACCTTTACTAATGCTTGAGTTCTACTTTGTATTAGCAGCAGTAAACAAATCAGATTCAGGAATTTTCTGGAGACTGATGATTGGTACATTAGTAATGCTTGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTATTCTCTGGTGAAGCAGGTAAAAGAGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACTGTAGGGTGGGCCATCTAT LLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIMTGDSPTVYRYIDWLITVPLLMLEFYFVLAAVNKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCAGTACCGGCT---GGATGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACATTACATGTACATGAGAGATGTATGGATC------------------------------ATGACT---------------------GGTGACTCACCAACTGTATACAGATACATTGACTGG------------------------TTAATTACAGTACCTTTACTAATGCTTGAGTTCTACTTTGTATTAGCAGCA---------GTA---AACAAATCAGATTCA---GGAATT------------------------------------TTCTGGAGA---CTGATGATTGGTACATTAGTAATGCTTGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAAAGAGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGGTGG---------GCCATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------MT-------GDSPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ903151 [IV-Alpha8-SAR11/Himb5] clone_HB10003_DQ903151 gi|116294031|gb|DQ903151| Uncultured bacterium clone HB10003 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone HB10003 putative proteorhodopsin gene, partial cds. DQ903151 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na East China Sea surface water (ECS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na ATGGTTGCCGCTACTGTGTTCTTCTTCTTAGAAAGAAGTTCAGTACCGGCTGGATGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATCATGACTGGTGACTCACCAACTGTATACAGATACATTGACTGGTTAATTACAGTACCTTTACTAATGCTTGAGTTCTACTTTGTATTAGCAGCAGTAAACAAATCAGATTCAGGAATTTTCTGGAGACTGATGATTGGTACATTAGTAATGCTTGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTATTCTCTGGTGAAGCAGGTAAAAGAGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCCTTTGGTGCGATGAGAATGATCGTTACAGTAGGGTGGGCCATATACCCA MVAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIMTGDSPTVYRYIDWLITVPLLMLEFYFVLAAVNKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTGTTCTTCTTCTTAGAAAGAAGTTCAGTACCGGCT---GGATGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATC------------------------------ATGACT---------------------GGTGACTCACCAACTGTATACAGATACATTGACTGG------------------------TTAATTACAGTACCTTTACTAATGCTTGAGTTCTACTTTGTATTAGCAGCA---------GTA---AACAAATCAGATTCA---GGAATT------------------------------------TTCTGGAGA---CTGATGATTGGTACATTAGTAATGCTTGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAAAGAGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCC---TTT---GGT---GCGATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGGTGG---------GCCATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------MT-------GDSPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_CP003809 [IV-Alpha8-SAR11/Himb5] Alphaproteobacterium_HIMB5_genome_CP003809 gi|406651373|gb|CP003809| Alpha proteobacterium HIMB5, complete genome Alpha proteobacterium HIMB5, complete genome CP003809 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Alphaproteobacteria/SAR11 cluster] taxon:859653 genomic_DNA strain 11-Dec-2013 #na #na Pacific Ocean marine 21.460467 -157.787657 Direct Submission Grote,J., Thrash,C., Huggett,M.J., Landry,Z., Carini,P., Giovannoni,S.J., Rappe,M.S., Brinkac,L., Kim,M., Beeson,K., Ferriera,S., Sutton,G., Friedman,R. and Venter,J.C. Submitted (10SEP2012) J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA #na #na ATGTTAGCACAGGATGATTTCGTAGGAATTTCATTTTGGCTAGTATCAATGGCATGTTTAGCTTCTACTGTATTCTTCTTCTTAGAAAGAAGTTCAGTACCGGCTGGATGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATCATGACTGGTGACTCACCAACTGTATACAGATACATTGACTGGTTAATTACAGTACCTTTACTAATGCTTGAGTTCTACTTTGTATTAGCAGCAGTAAACAAATCAGATTCAGGAATTTTCTGGAGACTGATGATTGGTACATTAGTAATGCTTGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTATTCTCTGGTGAAGCAGGTAAAAGAGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACTGTAGGTTGG MLAQDDFVGISFWLVSMACLASTVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIMTGDSPTVYRYIDWLITVPLLMLEFYFVLAAVNKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGW ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTTAGCACAGGATGATTTCGTAGGAATTTCATTTTGGCTAGTATCAATGGCATGTTTAGCTTCTACTGTATTCTTCTTCTTAGAAAGAAGTTCAGTACCGGCT---GGATGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATC------------------------------ATGACT---------------------GGTGACTCACCAACTGTATACAGATACATTGACTGG------------------------TTAATTACAGTACCTTTACTAATGCTTGAGTTCTACTTTGTATTAGCAGCA---------GTA---AACAAATCAGATTCA---GGAATT------------------------------------TTCTGGAGA---CTGATGATTGGTACATTAGTAATGCTTGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAAAGAGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------MLAQDDFVGISFWLVSMACLASTVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------MT-------GDSPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW--------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_1105165927846 [IV-Alpha8-SAR11/Himb5] JCVI_ORF_1105165927846_GS051_Coral_Reef_Atoll_1m jcvi|1105165927846| 1105165927846 JCVI ORF 1105165927846 1105165927846 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 22-MAY-2004 Coral_Reef_Atoll/1m_depth/S_34.2_psu/GS051/Rangirora_Atoll/Polynesia_Archipelagos Pacific Ocean marine -15.143611 -147.435 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATTGTTTGCTCTTACAGTTGTAGCTCTATGGGTGTTACAGGTGTAGCAAACGCTGAAACTGTCATGTTAGCACAGGATGATTTCGTAGGAATTTCATTTTGGCTAGTATCAATGGCATGTTTAGCTTCTACTGTATTCTTCTTCTTAGAGAGAAGTTCAGTACCAGCTGGATGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATCATGACTGGTGACTCACCAACTGTATACAGATACATTGACTGGTTAATTACAGTACCTTTACTAATGCTTGAGTTCTACTTTGTATTAGCAGCAGTAAACAAATCAGATTCAGGAATTTTCTGGAGACTGATGATTGGTACATTAGTAATGCTTGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTATTCTCTGGTGAAGCAGGTAAAAGAGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACTGTAGGTTGGGCGATCTACCCATTAGGTTACATTTTTGGTTACCTAACAGGTGGTGTAGATGCTAACTCACTAAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCTATGCAACAACCTGGTAGAGCTAAG IVCSYSCSSMGVTGVANAETVMLAQDDFVGISFWLVSMACLASTVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIMTGDSPTVYRYIDWLITVPLLMLEFYFVLAAVNKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMQQPGRAK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGTTTGCTCTTACAGTTGTAGCTCTATGGGTGTTACAGGTGTAGCAAACGCTGAAACTGTC---ATGTTAGCACAGGATGATTTCGTAGGAATTTCATTTTGGCTAGTATCAATGGCATGTTTAGCTTCTACTGTATTCTTCTTCTTAGAGAGAAGTTCAGTACCAGCT---GGATGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATC------------------------------ATGACT---------------------GGTGACTCACCAACTGTATACAGATACATTGACTGG------------------------TTAATTACAGTACCTTTACTAATGCTTGAGTTCTACTTTGTATTAGCAGCA---------GTA---AACAAATCAGATTCA---GGAATT------------------------------------TTCTGGAGA---CTGATGATTGGTACATTAGTAATGCTTGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAAAGAGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCGATCTACCCATTAGGTTACATTTTTGGTTACCTA---------------------------------------ACAGGTGGTGTAGATGCTAACTCACTAAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCTATGCAACAA---CCTGGTAGAGCTAAG------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------IVCSYSCSSMGVTGVANAETV-MLAQDDFVGISFWLVSMACLASTVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------MT-------GDSPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMQQ-PGRAK------------------------------------ [IV-Alpha8-SAR11/Himb5]_DQ422688 [IV-Alpha8-SAR11/Himb5] clone_med-tb04-20m-e6_DQ422688 gi|90024896|gb|DQ422688| Uncultured bacterium clone med-tb04-20m-e6 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-e6 putative proteorhodopsin gene, partial cds. DQ422688 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACAGTACCTTTACTAATGCTTGAGTTCTACTTTGTATTAGCAGCAGTAAACAAATCAGATTCAGGAATTTTCTGGAGATTGATGATTGGTACATTAGTAATGCTTGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTATTCTCTGGTGAAGCAGGTAAAAGAGCTGCTAAGAGTGGAAACAAGGCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLLMLEFYFVLAAVNKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTACCTTTACTAATGCTTGAGTTCTACTTTGTATTAGCAGCA---------GTA---AACAAATCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGATTGGTACATTAGTAATGCTTGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAAAGAGCTGCTAAG------AGT---GGAAACAAGGCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLAA---V-NKSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_EU079250 [IV-Alpha8-SAR11/Himb5] clone_B_Mtd1_024_EU079250 gi|156106659|gb|EU079250| Uncultured organism clone B Mtd1 024 putative proteorhodopsin gene, partial cds. Uncultured organism clone B Mtd1 024 putative proteorhodopsin gene, partial cds. EU079250 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; na light-energy conversion (ion transport) unknown [unclassified sequences/environmental samples] taxon:155900 genomic DNA other 27-FEB-2008 #na Sargasso Sea surface water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99-109 (2008) 18211270 #na GGATATTTAGGTGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCGGCGAAAAGTGGTAATAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATTGCTACAATAGGCCGGGC GYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIATIGR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGATATTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCGGCGAAA------AGT---GGTAATAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGCTACAATA---------------------------------------------------------------GGCCGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIATI---------------------GR--------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926233 [IV-Alpha8-SAR11/Himb5] RHOMEO_AG_OTU5_u8 gb|KJ926233| Uncultured bacterium cloneRHOMEO AG OTU5 u8 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU5 u8 putative proteorhodopsin gene, partial cds KJ926233 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGTTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATCCAGGAATTTTCTGGAGATTGATGCTTGGTACTTTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA WLITVPLLMLEFYFVLSAVNKADPGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATCCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACTTTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMLEFYFVLSA---V-NKADP-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_FJ862977 [IV-Alpha8-SAR11/Himb5] clone_37_FJ862977 gi|226897354|gb|FJ862977| Uncultured bacterium clone 37 putative proteorhodopsin mRNA, partial cds. Uncultured bacterium clone 37 putative proteorhodopsin mRNA, partial cds. FJ862977 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 07-DEC-2009 #na coastal seawater Atlantic Ocean marine 38.8489 -75.1076 Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTTGACTGGTTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACTTTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTT VDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGACTGG------------------------TTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACTTTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIV---------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ203442 [IV-Alpha8-SAR11/Himb5] medHO10A8_env_samples_DQ203442 gi|77547332|gb|DQ203442| Uncultured bacterium clone medHO10A8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10A8 predicted proteorhodopsin gene, partial cds DQ203442 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGTTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCCATTTACCCA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ203428 [IV-Alpha8-SAR11/Himb5] MedHO102H7_env_samples_DQ203428 gi|77547304|gb|DQ203428| Uncultured bacterium clone MedHO102H7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102H7 predicted proteorhodopsin gene, partial cds DQ203428 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGTTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATGCATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCCATTTATCCA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGCINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TGC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--C-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ203612 [IV-Alpha8-SAR11/Himb5] medHO120D10_env_samples_DQ203612 gi|77547672|gb|DQ203612| Uncultured bacterium clone medHO120D10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120D10 predicted proteorhodopsin gene, partial cds DQ203612 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGTTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGGGAATGATCGTTACTGTAGGTTGGGCCATATATCCA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMGMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---GGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-GMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ203440 [IV-Alpha8-SAR11/Himb5] medHO10A6_env_samples_DQ203440 gi|77547328|gb|DQ203440| Uncultured bacterium clone medHO10A6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10A6 predicted proteorhodopsin gene, partial cds DQ203440 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGTTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCCATTTACCCA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ203373 [IV-Alpha8-SAR11/Himb5] MedHO102C9_env_samples_DQ203373 gi|77547194|gb|DQ203373| Uncultured bacterium clone MedHO102C9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102C9 predicted proteorhodopsin gene, partial cds DQ203373 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGTTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACTTTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAATAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCCATATATCCA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACTTTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAATAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ203486 [IV-Alpha8-SAR11/Himb5] medHO10H3_env_samples_DQ203486 gi|77547420|gb|DQ203486| Uncultured bacterium clone medHO10H3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10H3 predicted proteorhodopsin gene, partial cds DQ203486 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGTTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACTTTAGTAATGCTTGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAATAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGGTGGGCCATATATCCA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACTTTAGTAATGCTTGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAATAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ203378 [IV-Alpha8-SAR11/Himb5] MedHO102D2_env_samples_DQ203378 gi|77547204|gb|DQ203378| Uncultured bacterium clone MedHO102D2 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102D2 predicted proteorhodopsin gene, partial cds DQ203378 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGACTGGCTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACTTTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAATAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCCATATATCCA SYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGACTGG------------------------CTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACTTTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAATAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_FJ560781 [IV-Alpha8-SAR11/Himb5] HEL45_env_samples_FJ560781 gi|223868709|gb|FJ560781| Uncultured microorganism clone HEL45 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL45 putative proteorhodopsin gene, partial cds FJ560781 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACTTTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCCTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAATAAAGCACTTGTCCTT TVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYIPYEVFSGEAGKRAAKSGNKALVL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACTTTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCCTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAATAAAGCACTT---GTC---CTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYIPYEV-----F--S-GEAGKRAAK--S-GNKAL-V-L------------------------------------------------------------------------------------------------------------------------------------------------ [IV-Alpha8-SAR11/Himb5]_DQ203718 [IV-Alpha8-SAR11/Himb5] medHO155F9_env_samples_DQ203718 gi|77547884|gb|DQ203718| Uncultured bacterium clone medHO155F9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155F9 predicted proteorhodopsin gene, partial cds DQ203718 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATACATTGACTGGTTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCGGTAAACAAAGCAGACTCAGGAATTTTCTGGAGATTGATGCTTGGTACTTTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGCTGGGCGATGTATCCA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAMYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATTGACTGG------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCG---------GTA---AACAAAGCAGACTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACTTTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGCTGG---------GCGATGTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AMYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ203434 [IV-Alpha8-SAR11/Himb5] medHO10A11_env_samples_DQ203434 gi|77547316|gb|DQ203434| Uncultured bacterium clone medHO10A11 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10A11 predicted proteorhodopsin gene, partial cds DQ203434 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGTTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGGTGGGCCATTTACCCA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGGTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ203420 [IV-Alpha8-SAR11/Himb5] MedHO102H10_env_samples_DQ203420 gi|77547288|gb|DQ203420| Uncultured bacterium clone MedHO102H10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102H10 predicted proteorhodopsin gene, partial cds DQ203420 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGTTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCCATTTACCCA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_1105101459830 [IV-Alpha8-SAR11/Himb5] JCVI_ORF_1105101459830_GS021_Coastal_2m jcvi|1105101459830| 1105101459830 JCVI ORF 1105101459830 1105101459830 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 19-janv-04 Coastal/2m_depth/S_30.7_psu/GS021/Gulf_of_Panama/Eastern_Tropical_Pacific Pacific Ocean marine 8.129167 -79.69111 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATTGTTTGCGCTACAGTTGTAGCCCTAATGGGTGTTACAGGTGTTGCAAACGCAGAGACAGTGATGTTAGCTCAGGATGATTTCGTTGGTATTTCATTTTGGTTAGTATCAATGGCTTGTTTAGCTGCTACTGTGTTCTTTTTCTTAGAAAGAAGTTCAGTTCCAGCTGGTTGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATCATGACTGGTGATTCACCAACTGTATACAGATACATTGACTGGTTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTAATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCTATTTACCCATTAGGTTACATTTTTGGTTACCTAACAGGTGGTGTAGATGCTAACTCACTAAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCATTTGGGCAGCAGCAATGCAACAACCTGGTAGAGCTAAG IVCATVVALMGVTGVANAETVMLAQDDFVGISFWLVSMACLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIMTGDSPTVYRYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMQQPGRAK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGTTTGCGCTACAGTTGTAGCCCTAATGGGTGTTACAGGTGTTGCAAACGCAGAGACAGTG---ATGTTAGCTCAGGATGATTTCGTTGGTATTTCATTTTGGTTAGTATCAATGGCTTGTTTAGCTGCTACTGTGTTCTTTTTCTTAGAAAGAAGTTCAGTTCCAGCT---GGTTGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATC------------------------------ATGACT---------------------GGTGATTCACCAACTGTATACAGATACATTGACTGG------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTAATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTACATTTTTGGTTACCTA---------------------------------------ACAGGTGGTGTAGATGCTAACTCACTAAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCATTTGGGCAGCAGCAATGCAACAA---CCTGGTAGAGCTAAG------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------IVCATVVALMGVTGVANAETV-MLAQDDFVGISFWLVSMACLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------MT-------GDSPTVYRYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMQQ-PGRAK------------------------------------ [IV-Alpha8-SAR11/Himb5]_1105075598006 [IV-Alpha8-SAR11/Himb5] JCVI_ORF_1105075598006_GS032_Mangrove_1m jcvi|1105075598006| 1105075598006 JCVI ORF 1105075598006 1105075598006 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 11-FEB-2004 Mangrove/1m_depth/S_n.a/GS032/Mangrove_on_Isabella_Island/Galapagos_Islands Pacific Ocean marine -0.5938889 -91.06944 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCGCTTACAGCTGTAGCCCTAATGGGTGTTACAGGTGTTGCAAACGCAGAGACAGTGATGTTAGCTCAAGATGATTTCGTAGGTATTTCATTTTGGTTAGTATCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAAAGAAGTTCAGTTCCAGCTGGTTGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATCATGACTGGTGACTCACCAACTGTTTACAGATACATTGACTGGTTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCTATTTACCCATTAGGTTACATTTTTGGTTACCTAACAGGTGGAGTAGATGCTAACTCACTTAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTCGGTCTAATCATTGGGCAGCAGCAATCACTCCCGGGCTCA MKKLKLFALTAVALMGVTGVANAETVMLAQDDFVGISFWLVSMACLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIMTGDSPTVYRYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDANSLNVIYNAADFLNKIAFGLIIGQQQSLPGS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCGCTTACAGCTGTAGCCCTAATGGGTGTTACAGGTGTTGCAAACGCAGAGACAGTG---ATGTTAGCTCAAGATGATTTCGTAGGTATTTCATTTTGGTTAGTATCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAAAGAAGTTCAGTTCCAGCT---GGTTGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATC------------------------------ATGACT---------------------GGTGACTCACCAACTGTTTACAGATACATTGACTGG------------------------TTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTACATTTTTGGTTACCTA---------------------------------------ACAGGTGGAGTAGATGCTAACTCACTTAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTCGGTCTAATCATTGGGCAGCAGCAATCACTCCCG---GGCTCA--------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALTAVALMGVTGVANAETV-MLAQDDFVGISFWLVSMACLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------MT-------GDSPTVYRYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDANSLNVIYNAADFLNKIAFGLIIGQQQSLP-GS--------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926093 [IV-Alpha8-SAR11/Himb5] BOUM_OTU006_env_samples gb|KJ926093| Uncultured bacterium clone BOUM OTU006 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU006 putative proteorhodopsin gene, partial cds KJ926093 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 38.96217 14.32367 #na #na #na #na #na GTTGACTGGTTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAATAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGGTGGGCAATATAC VDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGACTGG------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAATAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGGTGG---------GCAATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ203540 [IV-Alpha8-SAR11/Himb5] MedHO1202E12_env_samples_DQ203540 gi|77547528|gb|DQ203540| Uncultured bacterium clone MedHO1202E12 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202E12 predicted proteorhodopsin gene, partial cds DQ203540 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATACATTGACTGGTTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACTTTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCCACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAGGAGAGCAGCGAAAAGTGGTAATAAAGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCAATTTACCCA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGRRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATTGACTGG------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACTTTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCC------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAGGAGAGCAGCGAAA------AGT---GGTAATAAAGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGRRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ203671 [IV-Alpha8-SAR11/Himb5] medHO155B10_env_samples_DQ203671 gi|77547790|gb|DQ203671| Uncultured bacterium clone medHO155B10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155B10 predicted proteorhodopsin gene, partial cds DQ203671 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATACATTGACTGGTTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTAATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCAATCTACCCA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATTGACTGG------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTAATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ203459 [IV-Alpha8-SAR11/Himb5] medHO10D1_env_samples_DQ203459 gi|77547366|gb|DQ203459| Uncultured bacterium clone medHO10D1 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10D1 predicted proteorhodopsin gene, partial cds DQ203459 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGTTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCAATTTATCCA RYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_FJ560762 [IV-Alpha8-SAR11/Himb5] HEL16_env_samples_FJ560762 gi|223868671|gb|FJ560762| Uncultured microorganism clone HEL16 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL16 putative proteorhodopsin gene, partial cds FJ560762 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGACTGTGTTGGTGCAATGAGA TVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTDCVGAMR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACTGACTGT---GTT---GGT---GCAATG---AGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-TDC-V-G-AM-R------------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_1105115015128 [IV-Alpha8-SAR11/Himb5] JCVI_ORF_1105115015128_GS012_Estuary_14m jcvi|1105115015128| 1105115015128 JCVI ORF 1105115015128 1105115015128 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 18-DEC-2003 Estuary/14m_depth/S_3.5_psu/GS012/Chesapeake_Bay/MD/North_American_East_Coast Atlantic Ocean marine 38.946945 -76.41722 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCTCCTACAGCTGTGCTCCTTATGGGTGTTACAGGTGTAGCAAACGCAGAAACTGCCATGTTAGCTCAAGATGATTTCGTAGGAATTTCATTTTGGCTAGTATCAATGGCTTGTTTAGCTGCTACTGTGTTCTTCTTTCTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACAGTTGCTGGACTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATCAGTACTGGTGACTCACCAACTGTTTACAGATACATTGACTGGTTAATTACTGTACCGTTATTGATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGACTCTGGAATTTTCTGGAGACTGATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACACTACACTTGGTTTCATTATTGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGTTGGGCTATTTACCCGTTAGGTTACATTTTTGGTTACATGACAGGTGGAGTAGATGCTAGCTCACTAAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCATTTGGGCAGCAGCAATGCAACAACCTGGTAGAGCTAAG MKKLKLFAPTAVLLMGVTGVANAETAMLAQDDFVGISFWLVSMACLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWISTGDSPTVYRYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMIGTLVMLVGGYLGEAGYINTTLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYIFGYMTGGVDASSLNVIYNAADFLNKIAFGLIIWAAAMQQPGRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCTCCTACAGCTGTGCTCCTTATGGGTGTTACAGGTGTAGCAAACGCAGAAACTGCC---ATGTTAGCTCAAGATGATTTCGTAGGAATTTCATTTTGGCTAGTATCAATGGCTTGTTTAGCTGCTACTGTGTTCTTCTTTCTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACAGTTGCTGGACTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATC------------------------------AGTACT---------------------GGTGACTCACCAACTGTTTACAGATACATTGACTGG------------------------TTAATTACTGTACCGTTATTGATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTGATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTCATTATTGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCGTTAGGTTACATTTTTGGTTACATG---------------------------------------ACAGGTGGAGTAGATGCTAGCTCACTAAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCATTTGGGCAGCAGCAATGCAACAA---CCTGGTAGAGCTAAG------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------MKKLKLFAPTAVLLMGVTGVANAETA-MLAQDDFVGISFWLVSMACLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------ST-------GDSPTVYRYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NT------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYM-------------TGGVDASSLNVIYNAADFLNKIAFGLIIWAAAMQQ-PGRAK------------------------------------ [IV-Alpha8-SAR11/Himb5]_1105166027876 [IV-Alpha8-SAR11/Himb5] JCVI_ORF_1105166027876_GS011_Estuary_1m jcvi|1105166027876| 1105166027876 JCVI ORF 1105166027876 1105166027876 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 18-nov-03 Estuary/1m_depth/S_n.a/GS011/Delaware_Bay/NJ/North_American_East_Coast Atlantic Ocean marine 39.417778 -75.504166 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCTCTTACAGCTGTTGCTCTTATGGGTGTTACAGGTGTAGCAAACGCAGAAACTGCCATGTTAGCTCAAGATGATTTCGTAGGAATTTCATTTTGGCTAGTATCAATGGCTTGTTTAGCTGCTACTGTATTCTTCTTTCTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATCAGTACTGGTGATTCACCAACTGTTTACAGATACATTGACTGGTTAATTACTGTACCGTTATTGATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGACTCTGGAATTTTCTGGAGACTGATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACACTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGTTGGGCTATTTACCCGTTAGGTTACATTTTTGGTTACATGACAGGTGGAGTAGACGCTAGCTCACTAAACGTGATTTACAACGCGGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCATTTGGGCAGCAGCAATGCAACAACCTGGA MKKLKLFALTAVALMGVTGVANAETAMLAQDDFVGISFWLVSMACLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWISTGDSPTVYRYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMIGTLVMLVGGYLGEAGYINTTLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYIFGYMTGGVDASSLNVIYNAADFLNKIAFGLIIWAAAMQQPG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCTCTTACAGCTGTTGCTCTTATGGGTGTTACAGGTGTAGCAAACGCAGAAACTGCC---ATGTTAGCTCAAGATGATTTCGTAGGAATTTCATTTTGGCTAGTATCAATGGCTTGTTTAGCTGCTACTGTATTCTTCTTTCTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATC------------------------------AGTACT---------------------GGTGATTCACCAACTGTTTACAGATACATTGACTGG------------------------TTAATTACTGTACCGTTATTGATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTGATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCGTTAGGTTACATTTTTGGTTACATG---------------------------------------ACAGGTGGAGTAGACGCTAGCTCACTAAACGTGATTTACAACGCGGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCATTTGGGCAGCAGCAATGCAACAA---CCTGGA--------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALTAVALMGVTGVANAETA-MLAQDDFVGISFWLVSMACLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------ST-------GDSPTVYRYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NT------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYM-------------TGGVDASSLNVIYNAADFLNKIAFGLIIWAAAMQQ-PG--------------------------------------- [IV-Alpha8-SAR11/Himb5]_1105098942820 [IV-Alpha8-SAR11/Himb5] JCVI_ORF_1105098942820_GS011_Estuary_1m jcvi|1105098942820| 1105098942820 JCVI ORF 1105098942820 1105098942820 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 18-nov-03 Estuary/1m_depth/S_n.a/GS011/Delaware_Bay/NJ/North_American_East_Coast Atlantic Ocean marine 39.417778 -75.504166 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCTCTTACAGCTGTTGCTCTTATGGGTGTTACAGGTGTAGCAAACGCAGAAACTGCCATGTTAGCTCAAGATGATTTCGTAGGAATTTCATTTTGGCTAGTATCAATGGCTTGTTTAGCTGCTACTGTGTTCTTCTTTCTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACAGTTGCTGGACTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATCAGTACTGGTGACTCACCAACTGTTTACAGATACATTGACTGGTTAATTACTGTACCGTTATTGATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGACTCTGGAATTTTCTGGAGACTGATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCACGATACATCAACACTACACTTGGTTTCATTATTGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGTTGGGCTATTTACCCGTTAGGTTACATTTTTGGTTACATGACAGGTGGAGTAGATGCTAGCTCACTAAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCATTTGGGCAGCA MKKLKLFALTAVALMGVTGVANAETAMLAQDDFVGISFWLVSMACLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWISTGDSPTVYRYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMIGTLVMLVGGYLGEARYINTTLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYIFGYMTGGVDASSLNVIYNAADFLNKIAFGLIIWAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCTCTTACAGCTGTTGCTCTTATGGGTGTTACAGGTGTAGCAAACGCAGAAACTGCC---ATGTTAGCTCAAGATGATTTCGTAGGAATTTCATTTTGGCTAGTATCAATGGCTTGTTTAGCTGCTACTGTGTTCTTCTTTCTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACAGTTGCTGGACTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATC------------------------------AGTACT---------------------GGTGACTCACCAACTGTTTACAGATACATTGACTGG------------------------TTAATTACTGTACCGTTATTGATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTGATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------CGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTCATTATTGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCGTTAGGTTACATTTTTGGTTACATG---------------------------------------ACAGGTGGAGTAGATGCTAGCTCACTAAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCATTTGGGCAGCA------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------MKKLKLFALTAVALMGVTGVANAETA-MLAQDDFVGISFWLVSMACLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------ST-------GDSPTVYRYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMIGTLVMLVGGYLGE---A------R--Y-----------I----------------------NT------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYM-------------TGGVDASSLNVIYNAADFLNKIAFGLIIWAA---------------------------------------------- [IV-Alpha8-SAR11/Himb5]_1105081588640 [IV-Alpha8-SAR11/Himb5] JCVI_ORF_1105081588640_GS013_Coastal_3m jcvi|1105081588640| 1105081588640 JCVI ORF 1105081588640 1105081588640 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 19-DEC-2003 Coastal/3m_depth/S_n.a/GS013/Off_Nags_Head/NC/North_American_East_Coast Atlantic Ocean marine 36.003887 -75.39472 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCTCTTACAGCTGTTGCTCTTATGGGTGTTACAGGTGTAGCAAACGCAGAAACTGCCATGTTAGCTCAAGATGATTTCGTAGGAATTTCATTTTGGCTAGTATCAATGGCTTGTTTAGCTGCTACTGTGTTCTTCTTTCTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATCAGTACTGGTGATTCACCAACTGTTTACAGATACATTGACTGGTTAATTACTGTACCGTTATTGATGTTAGAATTCTATTTTGTTTTATCAGCAGTAAACAAAGCAGACTCTGGAATTTTCTGGAGACTGATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACACTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAATAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGTTGGGCTATTTACCCGTTAGGTTACATTTTCGGTTACATGACAGGTGGAGTAGACGCTAGCTCACTAAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCATTTGGGCAGCAGCAATGCAACAACCTGGTAGAGCTAAG MKKLKLFALTAVALMGVTGVANAETAMLAQDDFVGISFWLVSMACLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWISTGDSPTVYRYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMIGTLVMLVGGYLGEAGYINTTLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYIFGYMTGGVDASSLNVIYNAADFLNKIAFGLIIWAAAMQQPGRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCTCTTACAGCTGTTGCTCTTATGGGTGTTACAGGTGTAGCAAACGCAGAAACTGCC---ATGTTAGCTCAAGATGATTTCGTAGGAATTTCATTTTGGCTAGTATCAATGGCTTGTTTAGCTGCTACTGTGTTCTTCTTTCTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATC------------------------------AGTACT---------------------GGTGATTCACCAACTGTTTACAGATACATTGACTGG------------------------TTAATTACTGTACCGTTATTGATGTTAGAATTCTATTTTGTTTTATCAGCA---------GTA---AACAAAGCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTGATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAATAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCGTTAGGTTACATTTTCGGTTACATG---------------------------------------ACAGGTGGAGTAGACGCTAGCTCACTAAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCATTTGGGCAGCAGCAATGCAACAA---CCTGGTAGAGCTAAG------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------MKKLKLFALTAVALMGVTGVANAETA-MLAQDDFVGISFWLVSMACLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------ST-------GDSPTVYRYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NT------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYM-------------TGGVDASSLNVIYNAADFLNKIAFGLIIWAAAMQQ-PGRAK------------------------------------ [IV-Alpha8-SAR11/Himb5]_1105145484438 [IV-Alpha8-SAR11/Himb5] JCVI_ORF_1105145484438_GS008_Coastal_1m jcvi|1105145484438| 1105145484438 JCVI ORF 1105145484438 1105145484438 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 16-nov-03 Coastal/1m_depth/S_26.5_psu/GS008/Newport_Harbor/RI/North_American_East_Coast Atlantic Ocean marine 41.485832 -71.35111 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCTCTTACAGCTGTTGCTCTTATGGGTGTTACAGGTGTAGCAAACGCAGAAACTGCCATGTTAGCTCAAGATGATTTCGTAGGAATTTCATTTTGGCTAGTATCAATGGCTTGTTTAGCTGCTACTGTGTTCTTCTTTCTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATCGCTACTGGTGACTCACCAACTGTTTACAGATACATTGACTGGTTAATTACTGTACCGTTATTGATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGACTCTGGAATTTTCTGGAGACTGATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACACTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGTTGGGCTATTTACCCGTTAGGTTACATTTTTGGTTACATGACAGGTGGAGTAGACGCTAGCTCACTAAACGTGATTTACAACGCGGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCACTGCCAGGCCCAAA MKKLKLFALTAVALMGVTGVANAETAMLAQDDFVGISFWLVSMACLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIATGDSPTVYRYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMIGTLVMLVGGYLGEAGYINTTLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYIFGYMTGGVDASSLNVIYNAADFLNKIAFGLITARPK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCTCTTACAGCTGTTGCTCTTATGGGTGTTACAGGTGTAGCAAACGCAGAAACTGCC---ATGTTAGCTCAAGATGATTTCGTAGGAATTTCATTTTGGCTAGTATCAATGGCTTGTTTAGCTGCTACTGTGTTCTTCTTTCTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATC------------------------------GCTACT---------------------GGTGACTCACCAACTGTTTACAGATACATTGACTGG------------------------TTAATTACTGTACCGTTATTGATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTGATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCGTTAGGTTACATTTTTGGTTACATG---------------------------------------ACAGGTGGAGTAGACGCTAGCTCACTAAACGTGATTTACAACGCGGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCACTGCCAGGCCCAAA--------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALTAVALMGVTGVANAETA-MLAQDDFVGISFWLVSMACLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------AT-------GDSPTVYRYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NT------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYM-------------TGGVDASSLNVIYNAADFLNKIAFGLITARPK--------------------------------------------- [IV-Alpha8-SAR11/Himb5]_1105149440672 [IV-Alpha8-SAR11/Himb5] JCVI_ORF_1105149440672_GS008_Coastal_1m jcvi|1105149440672| 1105149440672 JCVI ORF 1105149440672 1105149440672 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 16-nov-03 Coastal/1m_depth/S_26.5_psu/GS008/Newport_Harbor/RI/North_American_East_Coast Atlantic Ocean marine 41.485832 -71.35111 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATAAAACTAACGAAGAGGGAGTTTTTTATGAAAAAACTTAAATTGTTTGCTCTTACAGCTGTTGCTCTTATGGGTGTTACAGGTGTAGCAAACGCAGAAACTGCCATGTTAGCTCAAGATGATTTCGTAGGAATTTCATTTTGGCTAGTATCAATGGCTTGTTTAGCTGCTACTGTGTTCTTCTTTCTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTCTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATCGCTACTGGTGACTCACCAACTGTTTACAGATACATTGACTGGTTAATTACTGTACCGTTATTGATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGACTCTGGAATTTTCTGGAGACTGATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACACTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGTTGGGCTATTTACCCGTTAGGTTACATTTTCGGTTACATGACAGGTGGAGTAGACGCTAGCTCACTAAACGTGATTTACAACGCGGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCATTTGGGCAGCAGCAATGCAACAACCTGGTAGAGCTAAG IKLTKREFFMKKLKLFALTAVALMGVTGVANAETAMLAQDDFVGISFWLVSMACLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIATGDSPTVYRYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMIGTLVMLVGGYLGEAGYINTTLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYIFGYMTGGVDASSLNVIYNAADFLNKIAFGLIIWAAAMQQPGRAK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAAACTAACGAAGAGGGAGTTTTTTATGAAAAAACTTAAATTGTTTGCTCTTACAGCTGTTGCTCTTATGGGTGTTACAGGTGTAGCAAACGCAGAAACTGCC---ATGTTAGCTCAAGATGATTTCGTAGGAATTTCATTTTGGCTAGTATCAATGGCTTGTTTAGCTGCTACTGTGTTCTTCTTTCTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTCTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATC------------------------------GCTACT---------------------GGTGACTCACCAACTGTTTACAGATACATTGACTGG------------------------TTAATTACTGTACCGTTATTGATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTGATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCGTTAGGTTACATTTTCGGTTACATG---------------------------------------ACAGGTGGAGTAGACGCTAGCTCACTAAACGTGATTTACAACGCGGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCATTTGGGCAGCAGCAATGCAACAA---CCTGGTAGAGCTAAG------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------IKLTKREFFMKKLKLFALTAVALMGVTGVANAETA-MLAQDDFVGISFWLVSMACLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------AT-------GDSPTVYRYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NT------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYM-------------TGGVDASSLNVIYNAADFLNKIAFGLIIWAAAMQQ-PGRAK------------------------------------ [IV-Alpha8-SAR11/Himb5]_FJ560826 [IV-Alpha8-SAR11/Himb5] HEL108_env_samples_FJ560826 gi|223868799|gb|FJ560826| Uncultured microorganism clone HEL108 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL108 putative proteorhodopsin gene, partial cds FJ560826 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTACCGTTATTGATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGACTCTGGAATTTTCTGGAGACTGATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACACTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACATGCGTT TVPLLMLEFYFVLSAVNKADSGIFWRLMIGTLVMLVGGYLGEAGYINTTLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTCV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTACCGTTATTGATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTGATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACA---TGC---GTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NT------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-C-V-------------------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_FJ560833 [IV-Alpha8-SAR11/Himb5] HEL119_env_samples_FJ560833 gi|223868813|gb|FJ560833| Uncultured microorganism clone HEL119 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL119 putative proteorhodopsin gene, partial cds FJ560833 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na TGGTTAATTACTGTACCGTTATTGATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGACTCTGGAATTTTCTGGAGACTGATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACACTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAAAAAGGGGT WLITVPLLMLEFYFVLSAVNKADSGIFWRLMIGTLVMLVGGYLGEAGYINTTLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVKRG ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATTACTGTACCGTTATTGATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTGATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---AAA---AGG---GGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NT------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-K-R-G-------------------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_FJ560856 [IV-Alpha8-SAR11/Himb5] HEL146_env_samples_FJ560856 gi|223868859|gb|FJ560856| Uncultured microorganism clone HEL146 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL146 putative proteorhodopsin gene, partial cds FJ560856 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTACCGTTATTGATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGACTCTGGAATTTTCTGGAGACTGATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACACTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACATGGGTT TVPLLMLEFYFVLSAVNKADSGIFWRLMIGTLVMLVGGYLGEAGYINTTLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTWV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTACCGTTATTGATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTGATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACA------------------------------------------------------------------------------------------------------------------TGG---------GTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NT------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T--------------------------------------W---V----------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_FJ560848 [IV-Alpha8-SAR11/Himb5] HEL135_env_samples_FJ560848 gi|223868843|gb|FJ560848| Uncultured microorganism clone HEL135 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL135 putative proteorhodopsin gene, partial cds FJ560848 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTACCGTTATTGATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGACTCTGGAATTTTCTGGAGACTGATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACACTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAAAAGCTTTTGGTGCAATGAGAATG TVPLLMLEFYFVLSAVNKADSGIFWRLMIGTLVMLVGGYLGEAGYINTTLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVKAFGAMRM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTACCGTTATTGATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTGATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---AAA---GCT---TTT---GGT---GCAATG---AGAATG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NT------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-K-A-F-G-AM-RM------------------------------------------------------------------------------------------------------------------------------------ [IV-Alpha8-SAR11/Himb5]_1105148021522 [IV-Alpha8-SAR11/Himb5] JCVI_ORF_1105148021522_GS014_Coastal_1m jcvi|1105148021522| 1105148021522 JCVI ORF 1105148021522 1105148021522 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 20-DEC-2003 Coastal/1m_depth/S_n.a/GS014/South_of_Charleston/SC/North_American_East_Coast Atlantic Ocean marine 32.506943 -79.263885 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCTCTTACAGCTGTTGCCCTAATGGGTGTTACAGGTGTAGCAAACGCAGAAACTGCCATGTTAGCTCAAGATGATTTCGTAGGTATTTCATTTTGGTTAGTATCAATGGCCTGTTTAGCTGCAACTGTGTTCTTTTTCCTAGAAAGAGGATCAGTACCAGCTGGATGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATTGCTACTGGTGACTCACCAACTGTTTACAGATACATTGACTGGTTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCAGTAAATAAAGCAAATTCTGGAATTTTCTGGAGATTGTTACTTGGTTCTATAGTTATGCTAGTAGGTGGATACTTAGGAGAAGCGGGATACATCAACACTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAGATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCTATTTACCCGTTAGGTTACATCTTTGGTTACATGACTGGTGGAGTAGACGCTAACTCACTTAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTTGGTCTGATCATTTGGGCAGCAGCTATGCACAACCTG MKKLKLFALTAVALMGVTGVANAETAMLAQDDFVGISFWLVSMACLAATVFFFLERGSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIATGDSPTVYRYIDWLITVPLLMLEFYFVLAAVNKANSGIFWRLLLGSIVMLVGGYLGEAGYINTTLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNRSLVTAFGAMRMIVTVGWAIYPLGYIFGYMTGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMHNL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCTCTTACAGCTGTTGCCCTAATGGGTGTTACAGGTGTAGCAAACGCAGAAACTGCC---ATGTTAGCTCAAGATGATTTCGTAGGTATTTCATTTTGGTTAGTATCAATGGCCTGTTTAGCTGCAACTGTGTTCTTTTTCCTAGAAAGAGGATCAGTACCAGCT---GGATGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATT------------------------------GCTACT---------------------GGTGACTCACCAACTGTTTACAGATACATTGACTGG------------------------TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCA---------GTA---AATAAAGCAAATTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTACTTGGTTCTATAGTTATGCTAGTAGGTGGATACTTAGGAGAA---------GCG------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAGATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCGTTAGGTTACATCTTTGGTTACATG---------------------------------------ACTGGTGGAGTAGACGCTAACTCACTTAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTTGGTCTGATCATTTGGGCAGCAGCTATGCACAAC---CTG------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------MKKLKLFALTAVALMGVTGVANAETA-MLAQDDFVGISFWLVSMACLAATVFFFLERGSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------AT-------GDSPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LLLGSIVMLVGGYLGE---A------G--Y-----------I----------------------NT------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNRSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYM-------------TGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMHN-L---------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ422447 [IV-Alpha8-SAR11/Himb5] clone_med-50m-h9_DQ422447 gi|90024414|gb|DQ422447| Uncultured bacterium clone med-50m-h9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-h9 putative proteorhodopsin gene, partial cds. DQ422447 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCAGTAAACAAATCAGACTCTGGAATTTTCTGGAGACTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLLMLEFYFVLAAVNKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCA---------GTA---AACAAATCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLAA---V-NKSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ422588 [IV-Alpha8-SAR11/Himb5] clone_med-tb04-0m-e10_DQ422588 gi|90024696|gb|DQ422588| Uncultured bacterium clone med-tb04-0m-e10 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-e10 putative proteorhodopsin gene, partial cds. DQ422588 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAATCAGACTCTGGAATTTTCTGGAGACTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCTAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGTTGGGCCATTTATCCA RYIDWLITVPLLMLEFYFVLSAVNKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAATCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCTAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ422635 [IV-Alpha8-SAR11/Himb5] clone_med-tb04-20m-a10_DQ422635 gi|90024790|gb|DQ422635| Uncultured bacterium clone med-tb04-20m-a10 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-a10 putative proteorhodopsin gene, partial cds. DQ422635 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACAGTACCACTATTGATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAATCAGACTCTGGAATTTTCTGGAGACTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLLMLEFYFVLSAVNKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTACCACTATTGATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAATCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMLEFYFVLSA---V-NKSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_DQ887803 [IV-Alpha8-SAR11/Himb5] clone_PF10031_DQ887803 gi|116294306|gb|DQ887803| Uncultured bacterium clone PF10031 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF10031 putative proteorhodopsin gene, partial cds. DQ887803 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2007 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na CTATTAGCGGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCAGTTCCAGCCGGATGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTGCACTACATGTACATGAGAGATGTATGGATCGCTACTGGTGACTCACCAACTGTATACAGATACATTGACTGGTTGATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAATCAGACTCTGGAATTTTCTGGAGACTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGATGGGCCATTTACCCA LLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIATGDSPTVYRYIDWLITVPLLMLEFYFVLSAVNKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCAGTTCCAGCC---GGATGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTGCACTACATGTACATGAGAGATGTATGGATC------------------------------GCTACT---------------------GGTGACTCACCAACTGTATACAGATACATTGACTGG------------------------TTGATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAATCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGATGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------AT-------GDSPTVYRYIDW--------LITVPLLMLEFYFVLSA---V-NKSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_EU915950 [IV-Alpha8-SAR11/Himb5] clone_23HO15-18_EU915950 gi|229358782|gb|EU915950| Uncultured bacterium clone 23HO15-18 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 23HO15-18 putative proteorhodopsin gene, partial cds. EU915950 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTATTAGCGGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCAGTTCCAGCTGGATGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATCGGTGACTCACCAACTGTATACAGATACATTGACTGGTTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAAATCAGACTCTGGAATTTTCTGGAGACTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCTATATAC LLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIGDSPTVYRYIDWLITVPLLMLEFYFVLSAVKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCAGTTCCAGCT---GGATGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATC---------------------------------------------------------GGTGACTCACCAACTGTATACAGATACATTGACTGG------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA------AAATCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI-------------------GDSPTVYRYIDW--------LITVPLLMLEFYFVLSA---V--KSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_1105151223176 [IV-Alpha8-SAR11/Himb5] JCVI_ORF_1105151223176_GS027_Coastal_3m jcvi|1105151223176| 1105151223176 JCVI ORF 1105151223176 1105151223176 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 04-FEB-2004 Coastal/3m_depth/S_34.9_psu/GS027/Devils_Crown/Floreana_Island/Galapagos_Islands Pacific Ocean marine -1.2161111 -90.422775 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAATTGTTTGCTCTTACAGTTGTTGCTCTTATGGGTGTAACTGGTATTGCAAACGCTGAAACAGCTATGCTGGCTCAAGACGATTTCGTAGGTATTTCGTTTTGGTTAGTATCTATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAAAGAAGTTCAGTTCCAGCTGGATGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATCGCTACTGGTGACTCACCAACTGTATACAGATACATTGACTGGTTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAATCAGACTCTGGAATTTTCTGGAGACTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCGATCTACCCATTAGGTTACATTTTTGGTTACCTAACAGGTGGTGTAGATGCTAACTCACTAAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCATTTGGGCAGCAGCTATGCAACAACCTGGTAGAGCTAAG MKKLKLFALTVVALMGVTGIANAETAMLAQDDFVGISFWLVSMACLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIATGDSPTVYRYIDWLITVPLLMLEFYFVLSAVNKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMQQPGRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAATTGTTTGCTCTTACAGTTGTTGCTCTTATGGGTGTAACTGGTATTGCAAACGCTGAAACAGCT---ATGCTGGCTCAAGACGATTTCGTAGGTATTTCGTTTTGGTTAGTATCTATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAAAGAAGTTCAGTTCCAGCT---GGATGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATC------------------------------GCTACT---------------------GGTGACTCACCAACTGTATACAGATACATTGACTGG------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAATCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCGATCTACCCATTAGGTTACATTTTTGGTTACCTA---------------------------------------ACAGGTGGTGTAGATGCTAACTCACTAAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTCGGTCTGATCATTTGGGCAGCAGCTATGCAACAA---CCTGGTAGAGCTAAG------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------MKKLKLFALTVVALMGVTGIANAETA-MLAQDDFVGISFWLVSMACLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------AT-------GDSPTVYRYIDW--------LITVPLLMLEFYFVLSA---V-NKSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMQQ-PGRAK------------------------------------ [IV-Alpha8-SAR11/Himb5]_EF088590 [IV-Alpha8-SAR11/Himb5] E400005_env_samples_EF088590 gi|126843421|gb|EF088590| Uncultured bacterium clone E400005 putative proteorhodopsin gene, partial cds Uncultured bacterium clone E400005 putative proteorhodopsin gene, partial cds EF088590 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na Bering_Sea_surface_water_sample Arctic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTGGCCGCTACTGTCTTCTTCTTTCTAGAGAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACATTACATGTATATGAGAGATGTATGGATCGCTACTGGCGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTCGTTCTTTCAGCGGTAAACAAAGCAGATTCAGGAATTTTCTGGAGACTGATGTTAGGAACAATAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATTAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGCAACAAGGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCTATATATCCA MVAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIATGDSPTVYRYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTIVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTCTTCTTCTTTCTAGAGAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACATTACATGTATATGAGAGATGTATGGATC------------------------------GCTACT---------------------GGCGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTCGTTCTTTCAGCG---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---CTGATGTTAGGAACAATAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGCAACAAGGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------AT-------GDSPTVYRYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTIVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_EU915898 [IV-Alpha8-SAR11/Himb5] US080005_env_samples_EU915898 gi|229358678|gb|EU915898| Uncultured microorganism clone US080005 putative proteorhodopsin gene, partial cds Uncultured microorganism clone US080005 putative proteorhodopsin gene, partial cds EU915898 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_surface_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGTCTTCTTCTTTCTAGAGAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACATTACATGTATATGAGAGATGTATGGATCGCTACTGGCGACTCGCCAACTGTTTACAGATACATTGACTGGTTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTCGTTCTTTCAGCGGTAAACAAAGCAGATTCAGGAATTTTCTGGAGACTGATGTTAGGAACAATAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATTAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGCAACAAGGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTAGGTTGGGCTATATAT MVAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIATGDSPTVYRYIDWLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTIVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTCTTCTTCTTTCTAGAGAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACATTACATGTATATGAGAGATGTATGGATC------------------------------GCTACT---------------------GGCGACTCGCCAACTGTTTACAGATACATTGACTGG------------------------TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTCGTTCTTTCAGCG---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---CTGATGTTAGGAACAATAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGCAACAAGGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------AT-------GDSPTVYRYIDW--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTIVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_JX863218 [IV-Alpha8-SAR11/Himb5] MALINA_OTU70_475_L_env_samples_JX863218 gi|425477386|gb|JX863218| Uncultured bacterium clone MALINA OTU70 475 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU70 475 L putative proteorhodopsin gene, partial cds JX863218 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 13Aug2009 0m_depth Arctic Ocean marine 69.25 -137.2 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGACTGATGTTAGGAACAATAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGCAACAAGGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA WLITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTIVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---CTGATGTTAGGAACAATAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGCAACAAGGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTIVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926229 [IV-Alpha8-SAR11/Himb5] RHOMEO_AG_OTU5_u4 gb|KJ926229| Uncultured bacterium cloneRHOMEO AG OTU5 u4 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU5 u4 putative proteorhodopsin gene, partial cds KJ926229 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGTTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGAACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAAAAGCTGCTAAGAGTGGAAACAAATCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACTGTA WLITVPLLMLEFYFVLAAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKKAAKSGNKSLVTAFGAMRMIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGAACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAAAAGCTGCTAAG------AGT---GGAAACAAATCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKKAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926226 [IV-Alpha8-SAR11/Himb5] RHOMEO_AG_OTU5_u11 gb|KJ926226| Uncultured bacterium cloneRHOMEO AG OTU5 u11 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU5 u11 putative proteorhodopsin gene, partial cds KJ926226 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGTTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGAACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGATATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAAAAGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACTGTA WLITVPLLMLEFYFVLAAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKKAAKSGNKALVTAFGAMRMIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGAACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGATATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAAAAGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKKAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_1105088902724 [IV-Alpha8-SAR11/Himb5] JCVI_ORF_1105088902724_GS010_Coastal_1m jcvi|1105088902724| 1105088902724 JCVI ORF 1105088902724 1105088902724 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 18-nov-03 Coastal/1m_depth/S_31_psu/GS010/Cape_May/NJ/North_American_East_Coast Atlantic Ocean marine 38.94 -74.685 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTTAAACTGTTTGCTCTTACAGCTGTTGCCCTAATGGGTGTTACAGGTGTAGCAAACGCAGAAACTGCCATGTTAGCTCAAGATGATTTCGTAGGTATTTCATTTTGGTTAGTATCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATCGCTACTGGTGACTCACCAACAGTTTACAGATACATTGACTGGTTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCAGCAGTAAACAAAGCAGACTCTGGAATTTTCTGGAGACTGATGATTGGAACATTAGTTATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATTAATGCTACACTTGGTTTCGTAATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAAAAAGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTAACAGTAGGTTGGGCTATTTACCCATTAGGTTACATTTTTGGTTACCTAACAGGTGGAGTAGACGCTAACTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCTATGCAACAACCTGGTAGAGCTAGA MKKLKLFALTAVALMGVTGVANAETAMLAQDDFVGISFWLVSMACLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIATGDSPTVYRYIDWLITVPLLMLEFYFVLAAVNKADSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFVIGMAGWIYILYEVFSGEAGKKAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMQQPGRAR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTTAAACTGTTTGCTCTTACAGCTGTTGCCCTAATGGGTGTTACAGGTGTAGCAAACGCAGAAACTGCC---ATGTTAGCTCAAGATGATTTCGTAGGTATTTCATTTTGGTTAGTATCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATC------------------------------GCTACT---------------------GGTGACTCACCAACAGTTTACAGATACATTGACTGG------------------------TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCAGCA---------GTA---AACAAAGCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTGATGATTGGAACATTAGTTATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCGTAATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAAAAAGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTACATTTTTGGTTACCTA---------------------------------------ACAGGTGGAGTAGACGCTAACTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCTATGCAACAA---CCTGGTAGAGCTAGA------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------MKKLKLFALTAVALMGVTGVANAETA-MLAQDDFVGISFWLVSMACLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------AT-------GDSPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEV-----F--S-GEAGKKAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMQQ-PGRAR------------------------------------ [IV-Alpha8-SAR11/Himb5]_DQ903156 [IV-Alpha8-SAR11/Himb5] clone_HB10016_DQ903156 gi|116294041|gb|DQ903156| Uncultured bacterium clone HB10016 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone HB10016 putative proteorhodopsin gene, partial cds. DQ903156 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na East China Sea surface water (ECS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na CTATTAGCGGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATCGCTACAGGTGACTCACCAACAGTTTACAGATACATTGACTGGTTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCAGCAGTAAACAAAGCAGACTCTGGAATTTTCTGGAGACTGATGATTGGAACATTAGTTATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATTAATGCTACACTTGGTTTCGTAATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAAAAAGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTAACAGTAGGGTGGGCAATCTACCCA LLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIATGDSPTVYRYIDWLITVPLLMLEFYFVLAAVNKADSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFVIGMAGWIYILYEVFSGEAGKKAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATC------------------------------GCTACA---------------------GGTGACTCACCAACAGTTTACAGATACATTGACTGG------------------------TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCAGCA---------GTA---AACAAAGCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTGATGATTGGAACATTAGTTATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCGTAATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAAAAAGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGGTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------AT-------GDSPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEV-----F--S-GEAGKKAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_1105085837413 [IV-Alpha8-SAR11/Himb5] JCVI_ORF_1105085837413_GS010_Coastal_1m jcvi|1105085837413| 1105085837413 JCVI ORF 1105085837413 1105085837413 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 18-nov-03 Coastal/1m_depth/S_31_psu/GS010/Cape_May/NJ/North_American_East_Coast Atlantic Ocean marine 38.94 -74.685 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf CTGTTTGCTCTTACAGCTGTAGCCCTAATGGGTGTTACAGGTGTAGCAAACGCAGAAACTGCCATGTTAGCTCAAGATGATTTCGTAGGTATTTCATTTTGGTTAGTATCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATCGCTACTGGAGACTCACCAACTGTTTACAGATACATTGACTGGTTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCAGTAAACAAAGCAGACTCTGGAATTTTCTGGAGACTGATGATCGGAACATTAGTTATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATTAATGCTACACTTGGTTTCGTAATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAAAAAGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTAACAGTAGGTTGGGCTATTTACCCATTAGGTTACATTTTTGGTTACCTAACAGGTGGAGTAGATGCTAACTCACTAAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCTATGCAACAACCAGGTAGAGCTAGA LFALTAVALMGVTGVANAETAMLAQDDFVGISFWLVSMACLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIATGDSPTVYRYIDWLITVPLLMLEFYFVLAAVNKADSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFVIGMAGWIYILYEVFSGEAGKKAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMQQPGRAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTTGCTCTTACAGCTGTAGCCCTAATGGGTGTTACAGGTGTAGCAAACGCAGAAACTGCC---ATGTTAGCTCAAGATGATTTCGTAGGTATTTCATTTTGGTTAGTATCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATC------------------------------GCTACT---------------------GGAGACTCACCAACTGTTTACAGATACATTGACTGG------------------------TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCA---------GTA---AACAAAGCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTGATGATCGGAACATTAGTTATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCGTAATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAAAAAGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTACATTTTTGGTTACCTA---------------------------------------ACAGGTGGAGTAGATGCTAACTCACTAAACGTGATTTACAACGCAGCTGACTTCTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCTATGCAACAA---CCAGGTAGAGCTAGA------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------LFALTAVALMGVTGVANAETA-MLAQDDFVGISFWLVSMACLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------AT-------GDSPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEV-----F--S-GEAGKKAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMQQ-PGRAR------------------------------------ [IV-Alpha8-SAR11/Himb5]_1105116380022 [IV-Alpha8-SAR11/Himb5] JCVI_ORF_1105116380022_GS027_Coastal_3m jcvi|1105116380022| 1105116380022 JCVI ORF 1105116380022 1105116380022 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 04-FEB-2004 Coastal/3m_depth/S_34.9_psu/GS027/Devils_Crown/Floreana_Island/Galapagos_Islands Pacific Ocean marine -1.2161111 -90.422775 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf GTAGCTGGAGCTATGGGCGCTACAGGTGTAGCAAACGCAGAAACTGCCATGTTAGCTCAAGATGATTTCGTAGGTATTTCATTTTGGTTGGTATCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAGAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATCGCTACTGGTGACTCACCAACTGTTTACAGATACATCGACTGGTTGATTACAGTTCCATTGCTAATGTTAGAATTCTATTTTGTTCTAGCTGCAGTAAATAAAGCAGATTCAGGAATTTTCTGGAGACTGATGATTGGAACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAAAAGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTAACAGTAGGTTGGGCTATTTACCCATTAGGTTACATTTTTGGTTACCTAACAGGTGGAGTAGATGCTAACTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCTATGCAACAACCTGGTAGAGCTAGA VAGAMGATGVANAETAMLAQDDFVGISFWLVSMACLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIATGDSPTVYRYIDWLITVPLLMLEFYFVLAAVNKADSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKKAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYIFGYLTGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMQQPGRAR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGCTGGAGCTATGGGCGCTACAGGTGTAGCAAACGCAGAAACTGCC---ATGTTAGCTCAAGATGATTTCGTAGGTATTTCATTTTGGTTGGTATCAATGGCTTGTTTAGCTGCTACTGTATTCTTTTTCTTAGAGAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACAGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATC------------------------------GCTACT---------------------GGTGACTCACCAACTGTTTACAGATACATCGACTGG------------------------TTGATTACAGTTCCATTGCTAATGTTAGAATTCTATTTTGTTCTAGCTGCA---------GTA---AATAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---CTGATGATTGGAACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAAAAGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTACATTTTTGGTTACCTA---------------------------------------ACAGGTGGAGTAGATGCTAACTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCTATGCAACAA---CCTGGTAGAGCTAGA------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------VAGAMGATGVANAETA-MLAQDDFVGISFWLVSMACLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------AT-------GDSPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKKAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYIFGYL-------------TGGVDANSLNVIYNAADFLNKIAFGLIIWAAAMQQ-PGRAR------------------------------------ [IV-Alpha8-SAR11]_EF640909 [IV-Alpha8-SAR11] Candidatus_Pelagibacter_ubique_HTCC1057_partial_EF640909 gi|149688777|gb|EF640909| Candidatus Pelagibacter ubique strain HTCC1057 proteorhodopsin gene, partial cds Candidatus Pelagibacter ubique strain HTCC1057 proteorhodopsin gene, partial cds EF640909 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Alphaproteobacteria/SAR11 cluster/Candidatus Pelagibacter] taxon:198252 genomic_DNA strain 13-sept-07 #na #na Pacific Ocean marine 44.651667 -124.411673 High intraspecific recombination rate in a native population of Candidatus pelagibacter ubique (SAR11) Vergin,K.L., Tripp,H.J., Wilhelm,L.J., Denver,D.R., Rappe,M.S. and Giovannoni,S.J. Environ. Microbiol. 9 (10), 24302440 (2007) 17803769 #na ATGGGTAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCCTAATGGGTGTTTCAGGTGTAGCAAACGCAGAAACTACACTGTTAGCTTCTGATGACTTTGTTGGAATTTCATTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCGGTTCCAGCTGGCTGGAGAGTTTCAATCACTGTTGCAGGACTAGTTACTGGTATTGCATTTATTCACTACATGTACATGAGAGATGTGTGGGTTATGACTGGTGAGTCACCAACAGTATACAGATATATTGACTGGTTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCAGTAAATAAAGCAAACTCTGGAATTTTCTGGAGATTGATGATTGGTACTTTAGTAATGCTAATCGGTGGATACTTAGGAGAAGCAAGATACATCAACACTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCAGGCGAAGCAGGAAAAAATGCAGCGAAAAGTGGAAACAAGGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTTGGTTGGGCTATCTACCCATTAGGTTATGTATTTGGTTACATGACTGGTGGAATGGACGCAAACTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGTCTCAACCTGGTAGAGCTAAA MGKKLKLFALTAVALMGVSGVANAETTLLASDDFVGISFWLVSMALLASTAFFFIERASVPAGWRVSITVAGLVTGIAFIHYMYMRDVWVMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKANSGIFWRLMIGTLVMLIGGYLGEARYINTTLGFVIGMAGWFYILYEVFSGEAGKNAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYMTGGMDANSLNVIYNAADFLNKIAFGLIIWAAAMSQPGRAK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCCTAATGGGTGTTTCAGGTGTAGCAAACGCAGAAACTACA---CTGTTAGCTTCTGATGACTTTGTTGGAATTTCATTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCGGTTCCAGCT---GGCTGGAGAGTTTCAATCACTGTTGCAGGACTAGTTACTGGTATTGCATTTATTCACTACATGTACATGAGAGATGTGTGGGTT------------------------------ATGACT---------------------GGTGAGTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---AATAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGATGATTGGTACTTTAGTAATGCTAATCGGTGGATACTTAGGAGAA---------GCA------------------AGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGCGAAGCAGGAAAAAATGCAGCGAAA------AGT---GGAAACAAGGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATCTACCCATTAGGTTATGTATTTGGTTACATG---------------------------------------ACTGGTGGAATGGACGCAAACTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGTCTCAA---CCTGGTAGAGCTAAA------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------MGKKLKLFALTAVALMGVSGVANAETT-LLASDDFVGISFWLVSMALLASTAFFFIERASVPA-GWRVSITVAGLVTGIAFIHYMYMRDVWV----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LMIGTLVMLIGGYLGE---A------R--Y-----------I----------------------NT------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKNAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYM-------------TGGMDANSLNVIYNAADFLNKIAFGLIIWAAAMSQ-PGRAK------------------------------------ [IV-Alpha8-SAR11]_EF640910 [IV-Alpha8-SAR11] Candidatus_Pelagibacter_ubique_HTCC1061_partial_EF640910 gi|149688779|gb|EF640910| Candidatus Pelagibacter ubique strain HTCC1061 proteorhodopsin gene, partial cds Candidatus Pelagibacter ubique strain HTCC1061 proteorhodopsin gene, partial cds EF640910 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Alphaproteobacteria/SAR11 cluster/Candidatus Pelagibacter] taxon:198252 genomic_DNA strain 13-sept-07 #na #na Pacific Ocean marine 44.651667 -124.411674 High intraspecific recombination rate in a native population of Candidatus pelagibacter ubique (SAR11) Vergin,K.L., Tripp,H.J., Wilhelm,L.J., Denver,D.R., Rappe,M.S. and Giovannoni,S.J. Environ. Microbiol. 9 (10), 24302440 (2007) 17803769 #na ATGGGTAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCCTAATGGGTGTTTCAGGTGTAGCAAACGCAGAAACTACACTGTTAGCTTCTGATGACTTTGTTGGAATTTCATTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCGGTTCCAGCTGGCTGGAGAGTTTCAATCACTGTTGCAGGACTAGTTACTGGTATTGCATTTATTCACTACATGTACATGAGAGATGTGTGGGTTATGACTGGTGAGTCACCAACAGTATACAGATATATTGACTGGTTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCAGTAAATAAAGCAAACTCTGGAATTTTCTGGAGATTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACACTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCAGGCGAAGCAGGAAAAAATGCAGCGAAAAGTGGAAACAAGGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTTGGTTGGGCTATCTACCCATTAGGTTATGTATTTGGTTACATGACTGGTGGAATGGACGCAAACTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGTCTCAACCTGGTAGAGCTAAG MGKKLKLFALTAVALMGVSGVANAETTLLASDDFVGISFWLVSMALLASTAFFFIERASVPAGWRVSITVAGLVTGIAFIHYMYMRDVWVMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKANSGIFWRLMIGTLVMLIGGYLGEAGYINTTLGFVIGMAGWFYILYEVFSGEAGKNAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYMTGGMDANSLNVIYNAADFLNKIAFGLIIWAAAMSQPGRAK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCCTAATGGGTGTTTCAGGTGTAGCAAACGCAGAAACTACA---CTGTTAGCTTCTGATGACTTTGTTGGAATTTCATTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCGGTTCCAGCT---GGCTGGAGAGTTTCAATCACTGTTGCAGGACTAGTTACTGGTATTGCATTTATTCACTACATGTACATGAGAGATGTGTGGGTT------------------------------ATGACT---------------------GGTGAGTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---AATAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGCGAAGCAGGAAAAAATGCAGCGAAA------AGT---GGAAACAAGGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATCTACCCATTAGGTTATGTATTTGGTTACATG---------------------------------------ACTGGTGGAATGGACGCAAACTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGTCTCAA---CCTGGTAGAGCTAAG------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------MGKKLKLFALTAVALMGVSGVANAETT-LLASDDFVGISFWLVSMALLASTAFFFIERASVPA-GWRVSITVAGLVTGIAFIHYMYMRDVWV----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NT------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKNAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYM-------------TGGMDANSLNVIYNAADFLNKIAFGLIIWAAAMSQ-PGRAK------------------------------------ [IV-Alpha8-SAR11]_EF640908 [IV-Alpha8-SAR11] Candidatus_Pelagibacter_ubique_HTCC1051_partial_EF640908 gi|149688775|gb|EF640908| Candidatus Pelagibacter ubique strain HTCC1051 proteorhodopsin gene, partial cds Candidatus Pelagibacter ubique strain HTCC1051 proteorhodopsin gene, partial cds EF640908 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Alphaproteobacteria/SAR11 cluster/Candidatus Pelagibacter] taxon:198252 genomic_DNA strain 13-sept-07 #na #na Pacific Ocean marine 44.651667 -124.411672 High intraspecific recombination rate in a native population of Candidatus pelagibacter ubique (SAR11) Vergin,K.L., Tripp,H.J., Wilhelm,L.J., Denver,D.R., Rappe,M.S. and Giovannoni,S.J. Environ. Microbiol. 9 (10), 24302440 (2007) 17803769 #na ATGGGTAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCCTAATGGGTGTTTCAGGTGTAGCAAACGCAGAAACTACACTGTTAGCTTCTGATGACTTTGTTGGAATTTCATTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCGGTTCCAGCTGGTTGGAGAGTTTCAATCACTGTTGCAGGGCTAGTTACTGGTATTGCATTTATTCACTACATGTACATGAGAGATGTGTGGGTTATGACTGGTGAGTCACCAACAGTATACAGATATATTGACTGGTTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCAGTAAATAAAGCAAACTCTGGAATTTTCTGGAGATTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACACTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCAGGCGAAGCAGGAAAAAATGCAGCGAAAAGTGGAAACAAGGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTTGGTTGGGCTATCTACCCATTAGGTTATGTATTTGGTTACATGACTGGTGGAATGGACGCAAACTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGTCTCAACCTGGTAGAGCTAAG MGKKLKLFALTAVALMGVSGVANAETTLLASDDFVGISFWLVSMALLASTAFFFIERASVPAGWRVSITVAGLVTGIAFIHYMYMRDVWVMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKANSGIFWRLMIGTLVMLIGGYLGEAGYINTTLGFVIGMAGWFYILYEVFSGEAGKNAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYMTGGMDANSLNVIYNAADFLNKIAFGLIIWAAAMSQPGRAK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCCTAATGGGTGTTTCAGGTGTAGCAAACGCAGAAACTACA---CTGTTAGCTTCTGATGACTTTGTTGGAATTTCATTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCGGTTCCAGCT---GGTTGGAGAGTTTCAATCACTGTTGCAGGGCTAGTTACTGGTATTGCATTTATTCACTACATGTACATGAGAGATGTGTGGGTT------------------------------ATGACT---------------------GGTGAGTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---AATAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGCGAAGCAGGAAAAAATGCAGCGAAA------AGT---GGAAACAAGGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATCTACCCATTAGGTTATGTATTTGGTTACATG---------------------------------------ACTGGTGGAATGGACGCAAACTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGTCTCAA---CCTGGTAGAGCTAAG------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------MGKKLKLFALTAVALMGVSGVANAETT-LLASDDFVGISFWLVSMALLASTAFFFIERASVPA-GWRVSITVAGLVTGIAFIHYMYMRDVWV----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NT------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKNAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYM-------------TGGMDANSLNVIYNAADFLNKIAFGLIIWAAAMSQ-PGRAK------------------------------------ [IV-Alpha8-SAR11]_EF640907 [IV-Alpha8-SAR11] Candidatus_Pelagibacter_ubique_HTCC1040_partial_EF640907 gi|149688773|gb|EF640907| Candidatus Pelagibacter ubique strain HTCC1040 proteorhodopsin gene, partial cds Candidatus Pelagibacter ubique strain HTCC1040 proteorhodopsin gene, partial cds EF640907 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Alphaproteobacteria/SAR11 cluster/Candidatus Pelagibacter] taxon:1118158 genomic_DNA strain 13-sept-07 #na #na Pacific Ocean marine 44.651667 -124.411671 High intraspecific recombination rate in a native population of Candidatus pelagibacter ubique (SAR11) Vergin,K.L., Tripp,H.J., Wilhelm,L.J., Denver,D.R., Rappe,M.S. and Giovannoni,S.J. Environ. Microbiol. 9 (10), 24302440 (2007) 17803769 #na ATGGGTAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCCTAATGGGTGTTTCAGGTGTAGCAAACGCAGAAACTACACTGTTAGCTTCTGATGACTTTGTTGGAATTTCATTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCGGTTCCAGCTGGCTGGAGAGTTTCAATCACTGTTGCAGGACTAGTTACTGGTATTGCATTTATTCACTACATGTACATGAGAGATGTGTGGGTTATGACTGGTGAGTCACCAACAGTATACAGATATATTGACTGGTTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCAGTAAACAAAGCAAACTCTGGAATATTCTGGAGATTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACACTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCAGGCGAAGCAGGAAAAAATGCAGCGAAAAGTGGAAACAAGGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTTGGTTGGGCTATCTACCCATTAGGTTATGTATTTGGTTACATGACTGGTGGAATGGACGCAAACTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGTCTCAACCTGGTAGAGCTAAG MGKKLKLFALTAVALMGVSGVANAETTLLASDDFVGISFWLVSMALLASTAFFFIERASVPAGWRVSITVAGLVTGIAFIHYMYMRDVWVMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKANSGIFWRLMIGTLVMLIGGYLGEAGYINTTLGFVIGMAGWFYILYEVFSGEAGKNAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYMTGGMDANSLNVIYNAADFLNKIAFGLIIWAAAMSQPGRAK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCCTAATGGGTGTTTCAGGTGTAGCAAACGCAGAAACTACA---CTGTTAGCTTCTGATGACTTTGTTGGAATTTCATTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCGGTTCCAGCT---GGCTGGAGAGTTTCAATCACTGTTGCAGGACTAGTTACTGGTATTGCATTTATTCACTACATGTACATGAGAGATGTGTGGGTT------------------------------ATGACT---------------------GGTGAGTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---AACAAAGCAAACTCT---GGAATA------------------------------------TTCTGGAGA---TTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGCGAAGCAGGAAAAAATGCAGCGAAA------AGT---GGAAACAAGGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATCTACCCATTAGGTTATGTATTTGGTTACATG---------------------------------------ACTGGTGGAATGGACGCAAACTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGTCTCAA---CCTGGTAGAGCTAAG------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------MGKKLKLFALTAVALMGVSGVANAETT-LLASDDFVGISFWLVSMALLASTAFFFIERASVPA-GWRVSITVAGLVTGIAFIHYMYMRDVWV----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NT------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKNAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYM-------------TGGMDANSLNVIYNAADFLNKIAFGLIIWAAAMSQ-PGRAK------------------------------------ [IV-Alpha8-SAR11]_EF640906 [IV-Alpha8-SAR11] Candidatus_Pelagibacter_ubique_HTCC1025_partial_EF640906 gi|149688771|gb|EF640906| Candidatus Pelagibacter ubique strain HTCC1025 proteorhodopsin gene, partial cds Candidatus Pelagibacter ubique strain HTCC1025 proteorhodopsin gene, partial cds EF640906 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Alphaproteobacteria/SAR11 cluster/Candidatus Pelagibacter] taxon:198252 genomic_DNA strain 13-sept-07 #na #na Pacific Ocean marine 44.651667 -124.41167 High intraspecific recombination rate in a native population of Candidatus pelagibacter ubique (SAR11) Vergin,K.L., Tripp,H.J., Wilhelm,L.J., Denver,D.R., Rappe,M.S. and Giovannoni,S.J. Environ. Microbiol. 9 (10), 24302440 (2007) 17803769 #na ATGGGTAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCCTAATGGGTGTTTCAGGTGTAGCAAACGCAGAAACTACACTGTTAGCTTCTGATGACTTTGTTGGAATTTCATTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCGGTTCCAGCTGGCTGGAGAGTTTCAATCACTGTTGCAGGACTAGTTACTGGTATTGCATTTATTCACTACATGTACATGAGAGATGTGTGGGTTATGACTGGTGAGTCACCAACAGTATACAGATATATTGACTGGTTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCAGTAAACAAAGCAAACTCTGGAATATTCTGGAGATTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACACTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCAGGCGAAGCAGGAAAAAATGCAGCGAAAAGTGGAAACAAGGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTTGGTTGGGCTATCTACCCATTAGGTTATGTATTTGGTTACATGACTGGTGGAATGGACGCAAACTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGTCTCAACCTGGTAGAGCTAAG MGKKLKLFALTAVALMGVSGVANAETTLLASDDFVGISFWLVSMALLASTAFFFIERASVPAGWRVSITVAGLVTGIAFIHYMYMRDVWVMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKANSGIFWRLMIGTLVMLIGGYLGEAGYINTTLGFVIGMAGWFYILYEVFSGEAGKNAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYMTGGMDANSLNVIYNAADFLNKIAFGLIIWAAAMSQPGRAK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCCTAATGGGTGTTTCAGGTGTAGCAAACGCAGAAACTACA---CTGTTAGCTTCTGATGACTTTGTTGGAATTTCATTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCGGTTCCAGCT---GGCTGGAGAGTTTCAATCACTGTTGCAGGACTAGTTACTGGTATTGCATTTATTCACTACATGTACATGAGAGATGTGTGGGTT------------------------------ATGACT---------------------GGTGAGTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---AACAAAGCAAACTCT---GGAATA------------------------------------TTCTGGAGA---TTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGCGAAGCAGGAAAAAATGCAGCGAAA------AGT---GGAAACAAGGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATCTACCCATTAGGTTATGTATTTGGTTACATG---------------------------------------ACTGGTGGAATGGACGCAAACTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGTCTCAA---CCTGGTAGAGCTAAG------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------MGKKLKLFALTAVALMGVSGVANAETT-LLASDDFVGISFWLVSMALLASTAFFFIERASVPA-GWRVSITVAGLVTGIAFIHYMYMRDVWV----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NT------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKNAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYM-------------TGGMDANSLNVIYNAADFLNKIAFGLIIWAAAMSQ-PGRAK------------------------------------ [IV-Alpha8-SAR11]_EF640905 [IV-Alpha8-SAR11] Candidatus_Pelagibacter_ubique_HTCC1016_partial_EF640905 gi|149688769|gb|EF640905| Candidatus Pelagibacter ubique strain HTCC1016 proteorhodopsin gene, partial cds Candidatus Pelagibacter ubique strain HTCC1016 proteorhodopsin gene, partial cds EF640905 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Alphaproteobacteria/SAR11 cluster/Candidatus Pelagibacter] taxon:1115650 genomic_DNA strain 13-sept-07 #na #na Pacific Ocean marine 44.651667 -124.411669 High intraspecific recombination rate in a native population of Candidatus pelagibacter ubique (SAR11) Vergin,K.L., Tripp,H.J., Wilhelm,L.J., Denver,D.R., Rappe,M.S. and Giovannoni,S.J. Environ. Microbiol. 9 (10), 24302440 (2007) 17803769 #na ATGGGTAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCCTAATGGGTGTTTCAGGTGTAGCAAACGCAGAAACTACACTGTTAGCTTCTGATGACTTTGTTGGAATTTCATTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCGGTTCCAGCTGGCTGGAGAGTATCAATCACTGTTGCAGGACTAGTTACTGGTATTGCATTTATTCACTACATGTACATGAGAGATGTGTGGGTTATGACTGGTGAGTCACCAACAGTATACAGATATATTGACTGGTTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCAGTAAATAAAGCAAACTCTGGAATTTTCTGGAGATTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACACTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCAGGCGAAGCAGGAAAAAATGCAGCGAAAAGTGGAAACAAGGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTTGGTTGGGCTATCTACCCATTAGGTTATGTATTTGGTTACATGACTGGTGGAATGGACGCAAGCTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGTCTCAACCTGGTAGAGCTAAG MGKKLKLFALTAVALMGVSGVANAETTLLASDDFVGISFWLVSMALLASTAFFFIERASVPAGWRVSITVAGLVTGIAFIHYMYMRDVWVMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKANSGIFWRLMIGTLVMLIGGYLGEAGYINTTLGFVIGMAGWFYILYEVFSGEAGKNAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYMTGGMDASSLNVIYNAADFLNKIAFGLIIWAAAMSQPGRAK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCCTAATGGGTGTTTCAGGTGTAGCAAACGCAGAAACTACA---CTGTTAGCTTCTGATGACTTTGTTGGAATTTCATTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCGGTTCCAGCT---GGCTGGAGAGTATCAATCACTGTTGCAGGACTAGTTACTGGTATTGCATTTATTCACTACATGTACATGAGAGATGTGTGGGTT------------------------------ATGACT---------------------GGTGAGTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---AATAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGCGAAGCAGGAAAAAATGCAGCGAAA------AGT---GGAAACAAGGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATCTACCCATTAGGTTATGTATTTGGTTACATG---------------------------------------ACTGGTGGAATGGACGCAAGCTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGTCTCAA---CCTGGTAGAGCTAAG------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------MGKKLKLFALTAVALMGVSGVANAETT-LLASDDFVGISFWLVSMALLASTAFFFIERASVPA-GWRVSITVAGLVTGIAFIHYMYMRDVWV----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NT------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKNAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYM-------------TGGMDASSLNVIYNAADFLNKIAFGLIIWAAAMSQ-PGRAK------------------------------------ [IV-Alpha8-SAR11]_EF640911 [IV-Alpha8-SAR11] Candidatus_Pelagibacter_ubique_HTCC1062_partial_EF640911 gi|149688781|gb|EF640911| Candidatus Pelagibacter ubique strain HTCC1062 proteorhodopsin gene, partial cds Candidatus Pelagibacter ubique strain HTCC1062 proteorhodopsin gene, partial cds EF640911 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Alphaproteobacteria/SAR11 cluster/Candidatus Pelagibacter] taxon:335992 genomic_DNA strain 13-sept-07 #na #na Pacific Ocean marine 44.651667 -124.411675 High intraspecific recombination rate in a native population of Candidatus pelagibacter ubique (SAR11) Vergin,K.L., Tripp,H.J., Wilhelm,L.J., Denver,D.R., Rappe,M.S. and Giovannoni,S.J. Environ. Microbiol. 9 (10), 24302440 (2007) 17803769 #na ATGGGTAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCCTAATGGGTGTTTCAGGTGTAGCAAACGCAGAAACTACACTGTTAGCTTCTGATGACTTTGTTGGAATTTCATTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCGGTTCCAGCTGGCTGGAGAGTTTCAATCACTGTTGCAGGACTAGTTACTGGTATTGCATTTATTCACTACATGTACATGAGAGATGTGTGGGTTATGACTGGTGAGTCACCAACAGTATACAGATATATTGACTGGTTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCAGTAAATAAAGCAAACTCTGGAATTTTCTGGAGATTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACACTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCAGGCGAAGCAGGAAAAAATGCAGCGAAAAGTGGAAACAAGGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTTGGTTGGGCTATCTACCCATTAGGTTATGTATTTGGTTACATGACTGGTGGAATGGACGCAAGCTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGTCTCAACCTGGTAGAGCTAAG MGKKLKLFALTAVALMGVSGVANAETTLLASDDFVGISFWLVSMALLASTAFFFIERASVPAGWRVSITVAGLVTGIAFIHYMYMRDVWVMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKANSGIFWRLMIGTLVMLIGGYLGEAGYINTTLGFVIGMAGWFYILYEVFSGEAGKNAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYMTGGMDASSLNVIYNAADFLNKIAFGLIIWAAAMSQPGRAK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCCTAATGGGTGTTTCAGGTGTAGCAAACGCAGAAACTACA---CTGTTAGCTTCTGATGACTTTGTTGGAATTTCATTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCGGTTCCAGCT---GGCTGGAGAGTTTCAATCACTGTTGCAGGACTAGTTACTGGTATTGCATTTATTCACTACATGTACATGAGAGATGTGTGGGTT------------------------------ATGACT---------------------GGTGAGTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---AATAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGCGAAGCAGGAAAAAATGCAGCGAAA------AGT---GGAAACAAGGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATCTACCCATTAGGTTATGTATTTGGTTACATG---------------------------------------ACTGGTGGAATGGACGCAAGCTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGTCTCAA---CCTGGTAGAGCTAAG------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------MGKKLKLFALTAVALMGVSGVANAETT-LLASDDFVGISFWLVSMALLASTAFFFIERASVPA-GWRVSITVAGLVTGIAFIHYMYMRDVWV----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NT------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKNAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYM-------------TGGMDASSLNVIYNAADFLNKIAFGLIIWAAAMSQ-PGRAK------------------------------------ [IV-Alpha8-SAR11]_EF640904 [IV-Alpha8-SAR11] Candidatus_Pelagibacter_ubique_HTCC1013_partial_EF640904 gi|149688767|gb|EF640904| Candidatus Pelagibacter ubique strain HTCC1013 proteorhodopsin gene, partial cds Candidatus Pelagibacter ubique strain HTCC1013 proteorhodopsin gene, partial cds EF640904 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Alphaproteobacteria/SAR11 cluster/Candidatus Pelagibacter] taxon:198252 genomic_DNA strain 13-sept-07 #na #na Pacific Ocean marine 44.651667 -124.411668 High intraspecific recombination rate in a native population of Candidatus pelagibacter ubique (SAR11) Vergin,K.L., Tripp,H.J., Wilhelm,L.J., Denver,D.R., Rappe,M.S. and Giovannoni,S.J. Environ. Microbiol. 9 (10), 24302440 (2007) 17803769 #na ATGGGTAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCCTAATGGGTGTTTCAGGTGTAGCAAACGCAGAAACTACACTGTTAGCTTCTGATGACTTTGTTGGAATTTCATTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCGGTTCCAGCTGGCTGGAGAGTTTCAATCACTGTTGCAGGACTAGTTACTGGTATTGCATTTATTCACTACATGTACATGAGAGATGTGTGGGTTATGACTGGTGAGTCACCAACAGTATACAGATATATTGACTGGTTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCAGTAAATAAAGCAAACTCTGGAATTTTCTGGAGATTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACACTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCAGGCGAAGCAGGAAAAAATGCAGCGAAAAGTGGAAACAAGGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTTGGTTGGGCTATCTACCCATTAGGTTATGTATTTGGTTACATGACTGGTGGAATGGACGCAAGCTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGTCTCAACCTGGTAGAGCTAAG MGKKLKLFALTAVALMGVSGVANAETTLLASDDFVGISFWLVSMALLASTAFFFIERASVPAGWRVSITVAGLVTGIAFIHYMYMRDVWVMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKANSGIFWRLMIGTLVMLIGGYLGEAGYINTTLGFVIGMAGWFYILYEVFSGEAGKNAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYMTGGMDASSLNVIYNAADFLNKIAFGLIIWAAAMSQPGRAK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCCTAATGGGTGTTTCAGGTGTAGCAAACGCAGAAACTACA---CTGTTAGCTTCTGATGACTTTGTTGGAATTTCATTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCGGTTCCAGCT---GGCTGGAGAGTTTCAATCACTGTTGCAGGACTAGTTACTGGTATTGCATTTATTCACTACATGTACATGAGAGATGTGTGGGTT------------------------------ATGACT---------------------GGTGAGTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---AATAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGCGAAGCAGGAAAAAATGCAGCGAAA------AGT---GGAAACAAGGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATCTACCCATTAGGTTATGTATTTGGTTACATG---------------------------------------ACTGGTGGAATGGACGCAAGCTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGTCTCAA---CCTGGTAGAGCTAAG------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------MGKKLKLFALTAVALMGVSGVANAETT-LLASDDFVGISFWLVSMALLASTAFFFIERASVPA-GWRVSITVAGLVTGIAFIHYMYMRDVWV----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NT------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKNAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYM-------------TGGMDASSLNVIYNAADFLNKIAFGLIIWAAAMSQ-PGRAK------------------------------------ [IV-Alpha8-SAR11]_EF640903 [IV-Alpha8-SAR11] Candidatus_Pelagibacter_ubique_HTCC1002_partial_EF640903 gi|149688765|gb|EF640903| Candidatus Pelagibacter ubique HTCC1002 proteorhodopsin gene, partial cds Candidatus Pelagibacter ubique HTCC1002 proteorhodopsin gene, partial cds EF640903 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Alphaproteobacteria/SAR11 cluster/Candidatus Pelagibacter] taxon:314261 genomic_DNA strain 13-sept-07 #na #na Pacific Ocean marine 44.651667 -124.411667 High intraspecific recombination rate in a native population of Candidatus pelagibacter ubique (SAR11) Vergin,K.L., Tripp,H.J., Wilhelm,L.J., Denver,D.R., Rappe,M.S. and Giovannoni,S.J. Environ. Microbiol. 9 (10), 24302440 (2007) 17803769 #na ATGGGTAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCCTAATGGGTGTTTCAGGTGTAGCAAACGCAGAAACTACACTGTTAGCTTCTGATGACTTTGTTGGAATTTCATTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCGGTTCCAGCTGGCTGGAGAGTTTCAATCACTGTTGCAGGACTAGTTACTGGTATTGCATTTATTCACTACATGTACATGAGAGATGTGTGGGTTATGACTGGTGAGTCGCCAACAGTATACAGATATATTGACTGGTTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCAGTAAATAAAGCAAACTCTGGAATTTTCTGGAGATTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACACTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCAGGCGAAGCAGGAAAAAATGCAGCGAAAAGTGGAAACAAGGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTTGGTTGGGCTATCTACCCATTAGGTTATGTATTTGGTTACATGACTGGTGGAATGGACGCAAACTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGTCTCAACCTGGTAGAGCTAAG MGKKLKLFALTAVALMGVSGVANAETTLLASDDFVGISFWLVSMALLASTAFFFIERASVPAGWRVSITVAGLVTGIAFIHYMYMRDVWVMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKANSGIFWRLMIGTLVMLIGGYLGEAGYINTTLGFVIGMAGWFYILYEVFSGEAGKNAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYMTGGMDANSLNVIYNAADFLNKIAFGLIIWAAAMSQPGRAK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCCTAATGGGTGTTTCAGGTGTAGCAAACGCAGAAACTACA---CTGTTAGCTTCTGATGACTTTGTTGGAATTTCATTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCGGTTCCAGCT---GGCTGGAGAGTTTCAATCACTGTTGCAGGACTAGTTACTGGTATTGCATTTATTCACTACATGTACATGAGAGATGTGTGGGTT------------------------------ATGACT---------------------GGTGAGTCGCCAACAGTATACAGATATATTGACTGG------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---AATAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGCGAAGCAGGAAAAAATGCAGCGAAA------AGT---GGAAACAAGGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATCTACCCATTAGGTTATGTATTTGGTTACATG---------------------------------------ACTGGTGGAATGGACGCAAACTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGTCTCAA---CCTGGTAGAGCTAAG------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------MGKKLKLFALTAVALMGVSGVANAETT-LLASDDFVGISFWLVSMALLASTAFFFIERASVPA-GWRVSITVAGLVTGIAFIHYMYMRDVWV----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NT------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKNAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYM-------------TGGMDANSLNVIYNAADFLNKIAFGLIIWAAAMSQ-PGRAK------------------------------------ [IV-Alpha8-SAR11]_1105154722642 [IV-Alpha8-SAR11] JCVI_ORF_1105154722642_GS005_Embayment_1m jcvi|1105154722642| 1105154722642 JCVI ORF 1105154722642 1105154722642 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 22-AUG-2003 Embayment/1m_depth/S_30.2_psu/GS005/Bedford_Basin/Nova_Scotia/North_American_East_Coast Atlantic Ocean marine 44.690277 -63.637222 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf CTAGCTGATGCTATGGGTGTTTCAGGTGTAGCAAACGCAGAAACTACACTGTTAGCTTCTGATGACTTTGTTGGAATTTCATTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCGGTTCCAGCTGGCTGGAGAGTTTCAATCACTGTTGCAGGACTAGTTACTGGTATTGCATTTATTCACTACATGTACATGAGAGATGTGTGGGTTATGACTGGTGAGTCACCAACAGTATACAGATATATTGACTGGTTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCAGTAAATAAAGCAAACTCTGGAATTTTCTGGAGATTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACACTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCAGGCGAAGCAGGAAAAAATGCAGCGAAAAGTGGAAACAAGGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTTGGTTGGGCTATCTACCCATTAGGTTATGTATTTGGTTACATGACTGGTGGAATGGACGCAAACTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGTCTCAACCTGGTAGAGCTAAG LADAMGVSGVANAETTLLASDDFVGISFWLVSMALLASTAFFFIERASVPAGWRVSITVAGLVTGIAFIHYMYMRDVWVMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKANSGIFWRLMIGTLVMLIGGYLGEAGYINTTLGFVIGMAGWFYILYEVFSGEAGKNAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYMTGGMDANSLNVIYNAADFLNKIAFGLIIWAAAMSQPGRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGCTGATGCTATGGGTGTTTCAGGTGTAGCAAACGCAGAAACTACA---CTGTTAGCTTCTGATGACTTTGTTGGAATTTCATTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCGGTTCCAGCT---GGCTGGAGAGTTTCAATCACTGTTGCAGGACTAGTTACTGGTATTGCATTTATTCACTACATGTACATGAGAGATGTGTGGGTT------------------------------ATGACT---------------------GGTGAGTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---AATAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGCGAAGCAGGAAAAAATGCAGCGAAA------AGT---GGAAACAAGGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATCTACCCATTAGGTTATGTATTTGGTTACATG---------------------------------------ACTGGTGGAATGGACGCAAACTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGTCTCAA---CCTGGTAGAGCTAAG------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------LADAMGVSGVANAETT-LLASDDFVGISFWLVSMALLASTAFFFIERASVPA-GWRVSITVAGLVTGIAFIHYMYMRDVWV----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NT------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKNAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYM-------------TGGMDANSLNVIYNAADFLNKIAFGLIIWAAAMSQ-PGRAK------------------------------------ [IV-Alpha8-SAR11]_1105132659884 [IV-Alpha8-SAR11] JCVI_ORF_1105132659884_GS005_Embayment_1m jcvi|1105132659884| 1105132659884 JCVI ORF 1105132659884 1105132659884 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 22-AUG-2003 Embayment/1m_depth/S_30.2_psu/GS005/Bedford_Basin/Nova_Scotia/North_American_East_Coast Atlantic Ocean marine 44.690277 -63.637222 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCCTAATGGGTGTTTCAGGTGTAGCAAACGCAGAAACTACACTGTTAGCTTCTGATGACTTTGTTGGAATTTCATTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCGGTTCCAGCTGGCTGGAGAGTTTCAATCACTGTTGCAGGACTAGTTACTGGTATTGCATTTATTCACTACATGTACATGAGAGATGTGTGGGTTATGACTGGTGAGTCACCAACAGTATACAGATATATTGACTGGTTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCAGTAAATAAAGCAAACTCTGGAATTTTCTGGAGATTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACACTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCAGGCGAAGCAGGAAAAAATGCAGCGAAAAGTGGAAACAAGGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTTGGTTGGGCTATCTACCCATTAGGTTATGTATTTGGTTACATGACTGGTGGAATGGACGCAAACTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGTCTCAACCTGGTAGAGCTAAG MKKLKLFALTAVALMGVSGVANAETTLLASDDFVGISFWLVSMALLASTAFFFIERASVPAGWRVSITVAGLVTGIAFIHYMYMRDVWVMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKANSGIFWRLMIGTLVMLIGGYLGEAGYINTTLGFVIGMAGWFYILYEVFSGEAGKNAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYMTGGMDANSLNVIYNAADFLNKIAFGLIIWAAAMSQPGRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCCTAATGGGTGTTTCAGGTGTAGCAAACGCAGAAACTACA---CTGTTAGCTTCTGATGACTTTGTTGGAATTTCATTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCGGTTCCAGCT---GGCTGGAGAGTTTCAATCACTGTTGCAGGACTAGTTACTGGTATTGCATTTATTCACTACATGTACATGAGAGATGTGTGGGTT------------------------------ATGACT---------------------GGTGAGTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---AATAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGCGAAGCAGGAAAAAATGCAGCGAAA------AGT---GGAAACAAGGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATCTACCCATTAGGTTATGTATTTGGTTACATG---------------------------------------ACTGGTGGAATGGACGCAAACTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGTCTCAA---CCTGGTAGAGCTAAG------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------MKKLKLFALTAVALMGVSGVANAETT-LLASDDFVGISFWLVSMALLASTAFFFIERASVPA-GWRVSITVAGLVTGIAFIHYMYMRDVWV----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NT------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKNAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYM-------------TGGMDANSLNVIYNAADFLNKIAFGLIIWAAAMSQ-PGRAK------------------------------------ [IV-Alpha8-SAR11]_1105125129218 [IV-Alpha8-SAR11] JCVI_ORF_1105125129218_GS009_Coastal_1m jcvi|1105125129218| 1105125129218 JCVI ORF 1105125129218 1105125129218 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 17-nov-03 Coastal/1m_depth/S_31_psu/GS009/Block_Island/NY/North_American_East_Coast Atlantic Ocean marine 41.09111 -71.60222 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCCTAATGGGTATTTCAGGTGTAGCAAACGCAGAAACTACACTGTTAGCTTCTGATGACTTTGTTGGAATTTCATTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCGGTTCCAGCTGGCTGGAGAGTTTCAATCACTGTTGCAGGACTAGTTACTGGTATTGCATTTATTCACTACATGTACATGAGAGATGTGTGGGTTATGACTGGTGAGTCACCAACAGTATACAGATATATTGACTGGTTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCAGTAAATAAAGCAAACTCTGGAATTTTCTGGAGATTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACACTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCAGGCGAAGCAGGAAAAAATGCAGCGAAAAGTGGAAACAAGGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTTGGTTGGGCTATCTACCCATTAGGTTATGTATTTGGTTACATGACTGGTGGAATGGACGCAAACTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGTCTCAACCTGGTAGAGCTAAG MKKLKLFALTAVALMGISGVANAETTLLASDDFVGISFWLVSMALLASTAFFFIERASVPAGWRVSITVAGLVTGIAFIHYMYMRDVWVMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKANSGIFWRLMIGTLVMLIGGYLGEAGYINTTLGFVIGMAGWFYILYEVFSGEAGKNAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYMTGGMDANSLNVIYNAADFLNKIAFGLIIWAAAMSQPGRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCCTAATGGGTATTTCAGGTGTAGCAAACGCAGAAACTACA---CTGTTAGCTTCTGATGACTTTGTTGGAATTTCATTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCGGTTCCAGCT---GGCTGGAGAGTTTCAATCACTGTTGCAGGACTAGTTACTGGTATTGCATTTATTCACTACATGTACATGAGAGATGTGTGGGTT------------------------------ATGACT---------------------GGTGAGTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---AATAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGCGAAGCAGGAAAAAATGCAGCGAAA------AGT---GGAAACAAGGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATCTACCCATTAGGTTATGTATTTGGTTACATG---------------------------------------ACTGGTGGAATGGACGCAAACTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGTCTCAA---CCTGGTAGAGCTAAG------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------MKKLKLFALTAVALMGISGVANAETT-LLASDDFVGISFWLVSMALLASTAFFFIERASVPA-GWRVSITVAGLVTGIAFIHYMYMRDVWV----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NT------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKNAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYM-------------TGGMDANSLNVIYNAADFLNKIAFGLIIWAAAMSQ-PGRAK------------------------------------ [IV-Alpha8-SAR11]_1105122493856 [IV-Alpha8-SAR11] JCVI_ORF_1105122493856_GS005_Embayment_1m jcvi|1105122493856| 1105122493856 JCVI ORF 1105122493856 1105122493856 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 22-AUG-2003 Embayment/1m_depth/S_30.2_psu/GS005/Bedford_Basin/Nova_Scotia/North_American_East_Coast Atlantic Ocean marine 44.690277 -63.637222 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCCTAATGAGTGTTTCAGGTGTAGCAAACGCAGAAACTACACTGTTAGCTTCTGATGACTTTGTTGGAATTTCATTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCGGTTCCAGCTGGCTGGAGAGTTTCAATCACTGTTGCAGGACTAGTTACTGGTATTGCATTTATTCACTACATGTACATGAGAGATGTGTGGGTTATGACTGGTGAGTCACCAACAGTATACAGATATATTGACTGGTTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCAGTAAATAAAGCAAACTCTGGAATTTTCTGGAGATTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACACTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCAGGCGAAGCAGGAAAAAATGCAGCGAAAAGTGGAAACAAGGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTTGGTTGGGCTATCTACCCATTAGGTTATGTATTTGGTTACATGACTGGTGGAATGGACGCAAACTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGTCTCAACCTGGTAGAGCTAAG MKKLKLFALTAVALMSVSGVANAETTLLASDDFVGISFWLVSMALLASTAFFFIERASVPAGWRVSITVAGLVTGIAFIHYMYMRDVWVMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKANSGIFWRLMIGTLVMLIGGYLGEAGYINTTLGFVIGMAGWFYILYEVFSGEAGKNAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYMTGGMDANSLNVIYNAADFLNKIAFGLIIWAAAMSQPGRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCCTAATGAGTGTTTCAGGTGTAGCAAACGCAGAAACTACA---CTGTTAGCTTCTGATGACTTTGTTGGAATTTCATTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCGGTTCCAGCT---GGCTGGAGAGTTTCAATCACTGTTGCAGGACTAGTTACTGGTATTGCATTTATTCACTACATGTACATGAGAGATGTGTGGGTT------------------------------ATGACT---------------------GGTGAGTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---AATAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGCGAAGCAGGAAAAAATGCAGCGAAA------AGT---GGAAACAAGGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATCTACCCATTAGGTTATGTATTTGGTTACATG---------------------------------------ACTGGTGGAATGGACGCAAACTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGTCTCAA---CCTGGTAGAGCTAAG------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------MKKLKLFALTAVALMSVSGVANAETT-LLASDDFVGISFWLVSMALLASTAFFFIERASVPA-GWRVSITVAGLVTGIAFIHYMYMRDVWV----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NT------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKNAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYM-------------TGGMDANSLNVIYNAADFLNKIAFGLIIWAAAMSQ-PGRAK------------------------------------ [IV-Alpha8-SAR11]_1105107990256 [IV-Alpha8-SAR11] JCVI_ORF_1105107990256_GS004_Coastal_2m jcvi|1105107990256| 1105107990256 JCVI ORF 1105107990256 1105107990256 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 22-AUG-2003 Coastal/2m_depth/S_28.3_psu/GS004/Outside_Halifax/Nova_Scotia/North_American_East_Coast Atlantic Ocean marine 44.137222 -63.644444 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCCTAATGGGTGTTTCAGGTGTAGCAAACGCAGAAACTACACTGTTAGCATCTGATGACTTTGTTGGAATTTCATTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCGGTTCCAGCTGGCTGGAGAGTTTCAATCACTGTTGCAGGACTAGTTACTGGTATTGCATTTATTCACTACATGTACATGAGAGATGTGTGGGTTATGACTGGTGAGTCACCAACAGTATACAGATATATTGACTGGTTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCAGTAAACAAAGCAAACTCTGGAATATTCTGGAGATTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACACTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCAGGCGAAGCAGGAAAAAATGCAGCGAAAAGTGGAAACAAGGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTTGGTTGGGCTATCTACCCATTAGGTTATGTATTTGGTTACATGACTGGTGGAATGGACGCAAACTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGTCTCAACCTGGTAGAGCTAAG MKKLKLFALTAVALMGVSGVANAETTLLASDDFVGISFWLVSMALLASTAFFFIERASVPAGWRVSITVAGLVTGIAFIHYMYMRDVWVMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKANSGIFWRLMIGTLVMLIGGYLGEAGYINTTLGFVIGMAGWFYILYEVFSGEAGKNAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYMTGGMDANSLNVIYNAADFLNKIAFGLIIWAAAMSQPGRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCCTAATGGGTGTTTCAGGTGTAGCAAACGCAGAAACTACA---CTGTTAGCATCTGATGACTTTGTTGGAATTTCATTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCGGTTCCAGCT---GGCTGGAGAGTTTCAATCACTGTTGCAGGACTAGTTACTGGTATTGCATTTATTCACTACATGTACATGAGAGATGTGTGGGTT------------------------------ATGACT---------------------GGTGAGTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---AACAAAGCAAACTCT---GGAATA------------------------------------TTCTGGAGA---TTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGCGAAGCAGGAAAAAATGCAGCGAAA------AGT---GGAAACAAGGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATCTACCCATTAGGTTATGTATTTGGTTACATG---------------------------------------ACTGGTGGAATGGACGCAAACTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGTCTCAA---CCTGGTAGAGCTAAG------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------MKKLKLFALTAVALMGVSGVANAETT-LLASDDFVGISFWLVSMALLASTAFFFIERASVPA-GWRVSITVAGLVTGIAFIHYMYMRDVWV----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NT------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKNAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYM-------------TGGMDANSLNVIYNAADFLNKIAFGLIIWAAAMSQ-PGRAK------------------------------------ [IV-Alpha8-SAR11]_1105107342584 [IV-Alpha8-SAR11] JCVI_ORF_1105107342584_GS005_Embayment_1m jcvi|1105107342584| 1105107342584 JCVI ORF 1105107342584 1105107342584 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 22-AUG-2003 Embayment/1m_depth/S_30.2_psu/GS005/Bedford_Basin/Nova_Scotia/North_American_East_Coast Atlantic Ocean marine 44.690277 -63.637222 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf GCAGTTTTTATGAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCCTAATGGGTATTTCAGGTGTAGCAAACGCAGAAACTGCACTGTTAGCTTCTGATGACTTTGTTGGAATTTCATTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCGGTTCCAGCTGGCTGGAGAGTTTCAATCACTGTTGCAGGACTAGTTACTGGTATTGCATTTATTCACTACATGTACATGAGAGATGTGTGGGTTATGACTGGTGAGTCACCAACAGTATACAGATATATTGACTGGTTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCAGTAAATAAAGCAAACTCTGGAATTTTCTGGAGATTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACACTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCAGGCGAAGCAGGAAAAAATGCAGCGAAAAGTGGAAACAAGGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTTGGTTGGGCTATCTACCCATTAGGTTATGTATTTGGTTACATGACTGGTGGAATGGACGCAAACTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGTCTCAACCTGGTAGAGCTAAG AVFMKKLKLFALTAVALMGISGVANAETALLASDDFVGISFWLVSMALLASTAFFFIERASVPAGWRVSITVAGLVTGIAFIHYMYMRDVWVMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKANSGIFWRLMIGTLVMLIGGYLGEAGYINTTLGFVIGMAGWFYILYEVFSGEAGKNAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYMTGGMDANSLNVIYNAADFLNKIAFGLIIWAAAMSQPGRAK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGTTTTTATGAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCCTAATGGGTATTTCAGGTGTAGCAAACGCAGAAACTGCA---CTGTTAGCTTCTGATGACTTTGTTGGAATTTCATTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCGGTTCCAGCT---GGCTGGAGAGTTTCAATCACTGTTGCAGGACTAGTTACTGGTATTGCATTTATTCACTACATGTACATGAGAGATGTGTGGGTT------------------------------ATGACT---------------------GGTGAGTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---AATAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGCGAAGCAGGAAAAAATGCAGCGAAA------AGT---GGAAACAAGGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATCTACCCATTAGGTTATGTATTTGGTTACATG---------------------------------------ACTGGTGGAATGGACGCAAACTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGTCTCAA---CCTGGTAGAGCTAAG------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------AVFMKKLKLFALTAVALMGISGVANAETA-LLASDDFVGISFWLVSMALLASTAFFFIERASVPA-GWRVSITVAGLVTGIAFIHYMYMRDVWV----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NT------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKNAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYM-------------TGGMDANSLNVIYNAADFLNKIAFGLIIWAAAMSQ-PGRAK------------------------------------ [IV-Alpha8-SAR11]_1105119110946 [IV-Alpha8-SAR11] JCVI_ORF_1105119110946_GS009_Coastal_1m jcvi|1105119110946| 1105119110946 JCVI ORF 1105119110946 1105119110946 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 17-nov-03 Coastal/1m_depth/S_31_psu/GS009/Block_Island/NY/North_American_East_Coast Atlantic Ocean marine 41.09111 -71.60222 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TTGTTTGCTCTTACAGCTGTAGCCCTAATGGGTGTTTCAGGTGTAGCAAACGCAGAAACTGCGATGTTAGCATCTGATGACTTTGTCGGAATTTCGTTCTGGCTTGTGTCAATGGCGTTATTAGCCTCAACTGCATTTTTTTTTATTGAAAGAGCATCAGTTCCAGCTAACTGGAGAGTTTCAATTACTGTTGCAGGACTAGTTACTGGTATTGCATTTATTCATTACATGTACATGAGAGATGTATGGGTTACGACTGGTGAGTCACCAACAGTATACAGATATATCGACTGGTTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCAGTAAATAAAGCAAACTCTGGAATATTCTGGAGATTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAATACTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCAGGCGAAGCAGGAAAAAATGCAGCAAAAAGCGGAAACAAAGCACTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTTGGTTGGGCTATCTACCCATTAGGTTATGTATTTGGTTACATGACTGGTGGAATGGACGCAAACTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGTCTCAACCTGGTAGAGCTAAG LFALTAVALMGVSGVANAETAMLASDDFVGISFWLVSMALLASTAFFFIERASVPANWRVSITVAGLVTGIAFIHYMYMRDVWVTTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKANSGIFWRLMIGTLVMLIGGYLGEAGYINTTLGFVIGMAGWFYILYEVFSGEAGKNAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYMTGGMDANSLNVIYNAADFLNKIAFGLIIWAAAMSQPGRAK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTTGCTCTTACAGCTGTAGCCCTAATGGGTGTTTCAGGTGTAGCAAACGCAGAAACTGCG---ATGTTAGCATCTGATGACTTTGTCGGAATTTCGTTCTGGCTTGTGTCAATGGCGTTATTAGCCTCAACTGCATTTTTTTTTATTGAAAGAGCATCAGTTCCAGCT---AACTGGAGAGTTTCAATTACTGTTGCAGGACTAGTTACTGGTATTGCATTTATTCATTACATGTACATGAGAGATGTATGGGTT------------------------------ACGACT---------------------GGTGAGTCACCAACAGTATACAGATATATCGACTGG------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---AATAAAGCAAACTCT---GGAATA------------------------------------TTCTGGAGA---TTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATACT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGCGAAGCAGGAAAAAATGCAGCAAAA------AGC---GGAAACAAAGCACTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATCTACCCATTAGGTTATGTATTTGGTTACATG---------------------------------------ACTGGTGGAATGGACGCAAACTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGTCTCAA---CCTGGTAGAGCTAAG------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------LFALTAVALMGVSGVANAETA-MLASDDFVGISFWLVSMALLASTAFFFIERASVPA-NWRVSITVAGLVTGIAFIHYMYMRDVWV----------TT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NT------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKNAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYM-------------TGGMDANSLNVIYNAADFLNKIAFGLIIWAAAMSQ-PGRAK------------------------------------ [IV-Alpha8-SAR11]_1105133676712 [IV-Alpha8-SAR11] JCVI_ORF_1105133676712_GS009_Coastal_1m jcvi|1105133676712| 1105133676712 JCVI ORF 1105133676712 1105133676712 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 17-nov-03 Coastal/1m_depth/S_31_psu/GS009/Block_Island/NY/North_American_East_Coast Atlantic Ocean marine 41.09111 -71.60222 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCCTAATGGGTGTTTCAGGTGTAGCAAACGCAGAAACTGCGATGTTAGCATCTGATGACTTTGTCGGAATTTCGTTCTGGCTTGTGTCAATGGCGTTATTAGCCTCAACTGCATTTTTTTTTATTGAAAGAGCATCAGTTCCAGCTAACTGGAGAGTTTCAATTACTGTTGCAGGACTAGTTACTGGTATTGCATTTATTCATTACATGTACATGAGAGATGTATGGGTTACGACTGGTGAGTCACCAACAGTATACAGATATATCGACTGGTTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCAGTAAATAAAGCAAACTCTGGAATATTCTGGAGATTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAATACTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCAGGCGAAGCAGGAAAAAATGCAGCAAAAAGCGGAAACAAAGCACTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTTGGTTGGGCTATCTACCCATTAGGTTATGTATTTGGTTACATGACTGGTGGAATGGACGCAAACTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGTCTCAACCTGGTAGAGCTAAG MKKLKLFALTAVALMGVSGVANAETAMLASDDFVGISFWLVSMALLASTAFFFIERASVPANWRVSITVAGLVTGIAFIHYMYMRDVWVTTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKANSGIFWRLMIGTLVMLIGGYLGEAGYINTTLGFVIGMAGWFYILYEVFSGEAGKNAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYMTGGMDANSLNVIYNAADFLNKIAFGLIIWAAAMSQPGRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCCTAATGGGTGTTTCAGGTGTAGCAAACGCAGAAACTGCG---ATGTTAGCATCTGATGACTTTGTCGGAATTTCGTTCTGGCTTGTGTCAATGGCGTTATTAGCCTCAACTGCATTTTTTTTTATTGAAAGAGCATCAGTTCCAGCT---AACTGGAGAGTTTCAATTACTGTTGCAGGACTAGTTACTGGTATTGCATTTATTCATTACATGTACATGAGAGATGTATGGGTT------------------------------ACGACT---------------------GGTGAGTCACCAACAGTATACAGATATATCGACTGG------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---AATAAAGCAAACTCT---GGAATA------------------------------------TTCTGGAGA---TTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATACT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGCGAAGCAGGAAAAAATGCAGCAAAA------AGC---GGAAACAAAGCACTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATCTACCCATTAGGTTATGTATTTGGTTACATG---------------------------------------ACTGGTGGAATGGACGCAAACTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGTCTCAA---CCTGGTAGAGCTAAG------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------MKKLKLFALTAVALMGVSGVANAETA-MLASDDFVGISFWLVSMALLASTAFFFIERASVPA-NWRVSITVAGLVTGIAFIHYMYMRDVWV----------TT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NT------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKNAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYM-------------TGGMDANSLNVIYNAADFLNKIAFGLIIWAAAMSQ-PGRAK------------------------------------ [IV-Alpha8-SAR11]_1105138004788 [IV-Alpha8-SAR11] JCVI_ORF_1105138004788_GS006_Estuary_1m jcvi|1105138004788| 1105138004788 JCVI ORF 1105138004788 1105138004788 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 23-AUG-2003 Estuary/1m_depth/S_n.a/GS006/Bay_of_Fundy/Nova_Scotia/North_American_East_Coast Atlantic Ocean marine 45.111668 -64.94666 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCCTAATGGGTGTTTCAGGTGTAGCAAACGCAGAAACTGCGATGTTAGCATCTGATGACTTTGTCGGAATTTCGTTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACTGCATTCTTTTTTATTGAAAGAGCATCAGTTCCAGCTAACTGGAGAGTTTCAATCACTGTTGCGGGACTAGTTACTGGTATTGCATTTATTCATTACATGTACATGAGAGATGTATGGGTTATGACTGGTGAGTCACCAACAGTATACAGATATATCGACTGGTTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCAGTAAATAAAGCAAACTCTGGAATATTCTGGAGATTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACACTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCAGGCGAAGCAGGAAAAAATGCAGCAAAAAGCGGAAACAAAGCACTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTTGGTTGGGCTATCTACCCATTAGGTTATGTATTTGGTTACATGACTGGTGGAATGGACGCAAACTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGTCTCAACCTGGTAGAGCTAAG MKKLKLFALTAVALMGVSGVANAETAMLASDDFVGISFWLVSMALLASTAFFFIERASVPANWRVSITVAGLVTGIAFIHYMYMRDVWVMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKANSGIFWRLMIGTLVMLIGGYLGEAGYINTTLGFVIGMAGWFYILYEVFSGEAGKNAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYMTGGMDANSLNVIYNAADFLNKIAFGLIIWAAAMSQPGRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCCTAATGGGTGTTTCAGGTGTAGCAAACGCAGAAACTGCG---ATGTTAGCATCTGATGACTTTGTCGGAATTTCGTTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACTGCATTCTTTTTTATTGAAAGAGCATCAGTTCCAGCT---AACTGGAGAGTTTCAATCACTGTTGCGGGACTAGTTACTGGTATTGCATTTATTCATTACATGTACATGAGAGATGTATGGGTT------------------------------ATGACT---------------------GGTGAGTCACCAACAGTATACAGATATATCGACTGG------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---AATAAAGCAAACTCT---GGAATA------------------------------------TTCTGGAGA---TTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGCGAAGCAGGAAAAAATGCAGCAAAA------AGC---GGAAACAAAGCACTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATCTACCCATTAGGTTATGTATTTGGTTACATG---------------------------------------ACTGGTGGAATGGACGCAAACTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGTCTCAA---CCTGGTAGAGCTAAG------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------MKKLKLFALTAVALMGVSGVANAETA-MLASDDFVGISFWLVSMALLASTAFFFIERASVPA-NWRVSITVAGLVTGIAFIHYMYMRDVWV----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NT------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKNAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYM-------------TGGMDANSLNVIYNAADFLNKIAFGLIIWAAAMSQ-PGRAK------------------------------------ [IV-Alpha8-SAR11]_JX863310 [IV-Alpha8-SAR11] MALINA_OTU41_358_L_env_samples_JX863310 gi|425477570|gb|JX863310| Uncultured bacterium clone MALINA OTU41 358 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU41 358 L putative proteorhodopsin mRNA, partial cds JX863310 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 02Aug2009 3m_depth Arctic Ocean marine 69.61 -138.23 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCAGTAAATAAAGCAAACTCTGGAATATTCTGGAGATTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACACTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCAGGCGAAGCAGGAAAAAATGCAGCAAAAAGCGGAAACAAAGCACTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTT WLITVPLLMLEFYFVLAAVNKANSGIFWRLMIGTLVMLIGGYLGEAGYINTTLGFVIGMAGWFYILYEVFSGEAGKNAAKSGNKALVTAFGAMRMIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---AATAAAGCAAACTCT---GGAATA------------------------------------TTCTGGAGA---TTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGCGAAGCAGGAAAAAATGCAGCAAAA------AGC---GGAAACAAAGCACTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NT------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKNAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11]_1105099988750 [IV-Alpha8-SAR11] JCVI_ORF_1105099988750_GS004_Coastal_2m jcvi|1105099988750| 1105099988750 JCVI ORF 1105099988750 1105099988750 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 22-AUG-2003 Coastal/2m_depth/S_28.3_psu/GS004/Outside_Halifax/Nova_Scotia/North_American_East_Coast Atlantic Ocean marine 44.137222 -63.644444 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCATAATGGGTGTTTCAGGTGTAGCAAACGCAGAAACTGCGATGTTAGCATCTGATGACTTTGTTGGAATTTCGTTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCAGTTCCAGCTGGCTGGAGAGTTTCGATCACTGTTGCAGGACTAGTTACTGGTATTGCATTTATTCACTACATGTACATGAGAGATGTGTGGGTTATGACTGGTGAGTCACCAACAGTATACAGATATATTGACTGGTTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCAGTAAATAAAGCAAACTCTGGAATTTTCTGGAGATTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACACTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCAGGCGAAGCAGGAAAAAATGCAGCGAAAAGTGGAAACAAGGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTTGGTTGGGCTATCTACCCATTAGGTTATGTATTTGGTTACATGACTGGTGGAATGGACGCAAACTCACTGAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGTCTCAACCTGGTAGAGCTAAG MKKLKLFALTAVAIMGVSGVANAETAMLASDDFVGISFWLVSMALLASTAFFFIERASVPAGWRVSITVAGLVTGIAFIHYMYMRDVWVMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKANSGIFWRLMIGTLVMLIGGYLGEAGYINTTLGFVIGMAGWFYILYEVFSGEAGKNAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYMTGGMDANSLNVIYNAADFLNKIAFGLIIWAAAMSQPGRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCATAATGGGTGTTTCAGGTGTAGCAAACGCAGAAACTGCG---ATGTTAGCATCTGATGACTTTGTTGGAATTTCGTTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCAGTTCCAGCT---GGCTGGAGAGTTTCGATCACTGTTGCAGGACTAGTTACTGGTATTGCATTTATTCACTACATGTACATGAGAGATGTGTGGGTT------------------------------ATGACT---------------------GGTGAGTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---AATAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGCGAAGCAGGAAAAAATGCAGCGAAA------AGT---GGAAACAAGGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATCTACCCATTAGGTTATGTATTTGGTTACATG---------------------------------------ACTGGTGGAATGGACGCAAACTCACTGAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGTCTCAA---CCTGGTAGAGCTAAG------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------MKKLKLFALTAVAIMGVSGVANAETA-MLASDDFVGISFWLVSMALLASTAFFFIERASVPA-GWRVSITVAGLVTGIAFIHYMYMRDVWV----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NT------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKNAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYM-------------TGGMDANSLNVIYNAADFLNKIAFGLIIWAAAMSQ-PGRAK------------------------------------ [IV-Alpha8-SAR11]_1105095275038 [IV-Alpha8-SAR11] JCVI_ORF_1105095275038_GS002_Coastal_1m jcvi|1105095275038| 1105095275038 JCVI ORF 1105095275038 1105095275038 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 21-AUG-2003 Coastal/1m_depth/S_29.2_psu/GS002/Gulf_of_Maine/North_American_East_Coast Atlantic Ocean marine 42.503056 -67.24 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCATAATGGGTGTTTCAGGTGTAGCAAACGCAGAAACTACACTGTTAGCTTCTGATGACTTTGTTGGAATTTCATTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCGGTTCCAGCTGGCTGGAGAGTTTCAATCACTGTTGCAGGACTAGTTACTGGTATTGCATTTATTCACTACATGTACATGAGAGATGTGTGGGTTATGACTGGTGAGTCACCAACAGTATACAGATATATTGACTGGTTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCAGTAAATAAAGCAAACTCTGGAATTTTCTGGAGATTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACACCACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCAGGCGAAGCAGGAAAAAATGCAGCAAAAAGTGGAAACAAGGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTTGGTTGGGCTATCTACCCATTAGGTTATGTATTTGGTTACATGACTGGTGGAATGGACGCAAACTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAATAAGATCGCTTTCGGTCTAATCATTTGGGCAGCAGCAATGTCTCAACCTGGTAGAGCTAAG MKKLKLFALTAVAIMGVSGVANAETTLLASDDFVGISFWLVSMALLASTAFFFIERASVPAGWRVSITVAGLVTGIAFIHYMYMRDVWVMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKANSGIFWRLMIGTLVMLIGGYLGEAGYINTTLGFVIGMAGWFYILYEVFSGEAGKNAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYMTGGMDANSLNVIYNAADFLNKIAFGLIIWAAAMSQPGRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCATAATGGGTGTTTCAGGTGTAGCAAACGCAGAAACTACA---CTGTTAGCTTCTGATGACTTTGTTGGAATTTCATTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCGGTTCCAGCT---GGCTGGAGAGTTTCAATCACTGTTGCAGGACTAGTTACTGGTATTGCATTTATTCACTACATGTACATGAGAGATGTGTGGGTT------------------------------ATGACT---------------------GGTGAGTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---AATAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACC------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGCGAAGCAGGAAAAAATGCAGCAAAA------AGT---GGAAACAAGGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATCTACCCATTAGGTTATGTATTTGGTTACATG---------------------------------------ACTGGTGGAATGGACGCAAACTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAATAAGATCGCTTTCGGTCTAATCATTTGGGCAGCAGCAATGTCTCAA---CCTGGTAGAGCTAAG------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------MKKLKLFALTAVAIMGVSGVANAETT-LLASDDFVGISFWLVSMALLASTAFFFIERASVPA-GWRVSITVAGLVTGIAFIHYMYMRDVWV----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NT------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKNAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYM-------------TGGMDANSLNVIYNAADFLNKIAFGLIIWAAAMSQ-PGRAK------------------------------------ [IV-Alpha8-SAR11]_1105147569586 [IV-Alpha8-SAR11] JCVI_ORF_1105147569586_GS005_Embayment_1m jcvi|1105147569586| 1105147569586 JCVI ORF 1105147569586 1105147569586 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 22-AUG-2003 Embayment/1m_depth/S_30.2_psu/GS005/Bedford_Basin/Nova_Scotia/North_American_East_Coast Atlantic Ocean marine 44.690277 -63.637222 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCATAATGGGTGTTTCAGGTGTAGCAAACGCAGAAACTACACTGTTAGCTTCTGATGACTTTGTTGGAATTTCATTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCGGTTCCAGCTGGCTGGAGAGTTTCAATCACTGTTGCAGGACTAGTTACTGGTATTGCATTTATTCACTACATGTACATGAGAGATGTATGGGTTATGACTGGTGAGTCACCAACAGTATACAGATATATTGACTGGTTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCAGTAAATAAAGCAAACTCTGGAATTTTCTGGAGATTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACACTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCAGGCGAAGCAGGAAAAAATGCAGCGAAAAGTGGAAACAAGGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTTGGTTGGGCTATCTACCCATTAGGTTATGTATTTGGTTACATGACTGGTGGAATGGACGCAAACTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGTCTCAACCTGGTAGAGCTAAG MKKLKLFALTAVAIMGVSGVANAETTLLASDDFVGISFWLVSMALLASTAFFFIERASVPAGWRVSITVAGLVTGIAFIHYMYMRDVWVMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKANSGIFWRLMIGTLVMLIGGYLGEAGYINTTLGFVIGMAGWFYILYEVFSGEAGKNAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYMTGGMDANSLNVIYNAADFLNKIAFGLIIWAAAMSQPGRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCATAATGGGTGTTTCAGGTGTAGCAAACGCAGAAACTACA---CTGTTAGCTTCTGATGACTTTGTTGGAATTTCATTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCGGTTCCAGCT---GGCTGGAGAGTTTCAATCACTGTTGCAGGACTAGTTACTGGTATTGCATTTATTCACTACATGTACATGAGAGATGTATGGGTT------------------------------ATGACT---------------------GGTGAGTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---AATAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGCGAAGCAGGAAAAAATGCAGCGAAA------AGT---GGAAACAAGGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATCTACCCATTAGGTTATGTATTTGGTTACATG---------------------------------------ACTGGTGGAATGGACGCAAACTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGTCTCAA---CCTGGTAGAGCTAAG------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------MKKLKLFALTAVAIMGVSGVANAETT-LLASDDFVGISFWLVSMALLASTAFFFIERASVPA-GWRVSITVAGLVTGIAFIHYMYMRDVWV----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NT------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKNAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYM-------------TGGMDANSLNVIYNAADFLNKIAFGLIIWAAAMSQ-PGRAK------------------------------------ [IV-Alpha8-SAR11]_1105091632100 [IV-Alpha8-SAR11] JCVI_ORF_1105091632100_GS002_Coastal_1m jcvi|1105091632100| 1105091632100 JCVI ORF 1105091632100 1105091632100 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 21-AUG-2003 Coastal/1m_depth/S_29.2_psu/GS002/Gulf_of_Maine/North_American_East_Coast Atlantic Ocean marine 42.503056 -67.24 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCCTAATGGGTGTTTCAGGTGTAGCAAACGCAGAAACTACACTGTTAGCTTCTGATGACTTTGTTGGAATTTCATTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCGGTTCCAGCTGGCTGGAGAGTTTCAATCACTGTTGCAGGACTAGTTACTGGTATTGCATTTATTCACTACATGTACATGAGAGATGTGTGGGTTATGACTGGTGAGTCACCAACAGTATACAGATATATTGACTGGTTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCAGTAAATAAAGCAAACTCTGGAATTTTCTGGAGATTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACACTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCAGGCGAAGCAGGAAAAAATGCAGCGAAAAGTGGAAACAAGGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTTGGTTGGGCTATCTACCCATTAGGTTATGTATTTGGTTACATGACTGGTGGAATGGACGCAAACTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGTCTCAACCTGGTAGAGCTAAG MKKLKLFALTAVALMGVSGVANAETTLLASDDFVGISFWLVSMALLASTAFFFIERASVPAGWRVSITVAGLVTGIAFIHYMYMRDVWVMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKANSGIFWRLMIGTLVMLIGGYLGEAGYINTTLGFVIGMAGWFYILYEVFSGEAGKNAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYMTGGMDANSLNVIYNAADFLNKIAFGLIIWAAAMSQPGRAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCCTAATGGGTGTTTCAGGTGTAGCAAACGCAGAAACTACA---CTGTTAGCTTCTGATGACTTTGTTGGAATTTCATTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCGGTTCCAGCT---GGCTGGAGAGTTTCAATCACTGTTGCAGGACTAGTTACTGGTATTGCATTTATTCACTACATGTACATGAGAGATGTGTGGGTT------------------------------ATGACT---------------------GGTGAGTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---AATAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGCGAAGCAGGAAAAAATGCAGCGAAA------AGT---GGAAACAAGGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATCTACCCATTAGGTTATGTATTTGGTTACATG---------------------------------------ACTGGTGGAATGGACGCAAACTCACTAAACGTGATTTACAACGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGTCTCAA---CCTGGTAGAGCTAAG------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------MKKLKLFALTAVALMGVSGVANAETT-LLASDDFVGISFWLVSMALLASTAFFFIERASVPA-GWRVSITVAGLVTGIAFIHYMYMRDVWV----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NT------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKNAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYM-------------TGGMDANSLNVIYNAADFLNKIAFGLIIWAAAMSQ-PGRAK------------------------------------ [IV-Alpha8-SAR11]_1105135223375 [IV-Alpha8-SAR11] JCVI_ORF_1105135223375 jcvi|1105135223375| 1105135223375 JCVI ORF 1105135223375 1105135223375 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 21-AUG-2003 Coastal/1m_depth/S_29.9_psu/GS003/Browns_Bank/Gulf_of_Maine/North_American_East_Coast Atlantic Ocean marine 42.85278 -66.217224 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCCTAATGGGTGTTTCAGGTGTAGCAAACGCAGAAACTACACTGTTAGCTTCTGATGACTTTGTTGGAATTTCATTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCGGTTCCAGCTGGCTGGAGAGTTTCAATCACTGTTGCAGGACTAGTTACTGGTATTGCATTTATTCACTACATGTACATGAGAGATGTGTGGGTTATGACTGGTGAGTCACCAACAGTATACAGATATATTGACTGGTTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCAGTAAATAAAGCAAACTCTGGAATTTTCTGGAGATTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACACTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCAGGCGAAGCAGGAAAAAATGCAGCGAAAAGTGGAAACAAGGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTTGGTTGGGCTATCTACCCATTAGGTTATGTATTTGGTTACATGACTGGTGGAATGGACGCAAACTCACTAAACGTGATACTCCAAACCCGT MKKLKLFALTAVALMGVSGVANAETTLLASDDFVGISFWLVSMALLASTAFFFIERASVPAGWRVSITVAGLVTGIAFIHYMYMRDVWVMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKANSGIFWRLMIGTLVMLIGGYLGEAGYINTTLGFVIGMAGWFYILYEVFSGEAGKNAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYMTGGMDANSLNVILQTR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCCTAATGGGTGTTTCAGGTGTAGCAAACGCAGAAACTACA---CTGTTAGCTTCTGATGACTTTGTTGGAATTTCATTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCGGTTCCAGCT---GGCTGGAGAGTTTCAATCACTGTTGCAGGACTAGTTACTGGTATTGCATTTATTCACTACATGTACATGAGAGATGTGTGGGTT------------------------------ATGACT---------------------GGTGAGTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---AATAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGCGAAGCAGGAAAAAATGCAGCGAAA------AGT---GGAAACAAGGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATCTACCCATTAGGTTATGTATTTGGTTACATG---------------------------------------ACTGGTGGAATGGACGCAAACTCACTAAACGTGATACTCCAAACCCGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALTAVALMGVSGVANAETT-LLASDDFVGISFWLVSMALLASTAFFFIERASVPA-GWRVSITVAGLVTGIAFIHYMYMRDVWV----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NT------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKNAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYM-------------TGGMDANSLNVILQTR------------------------------------------------------------- [IV-Alpha8-SAR11]_FJ560788 [IV-Alpha8-SAR11] HEL58_env_samples_FJ560788 gi|223868723|gb|FJ560788| Uncultured microorganism clone HEL58 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL58 putative proteorhodopsin gene, partial cds FJ560788 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCAGTAAATAAAGCAAACTCTGGAATTTTCTGGAGATTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACACTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCAGGCGAAGCAGGAAAAAATGCAGCGAAAAGTGGAAACAAGGCTCTTGTTACTGCATTTGGTGCAATGAGAATG TVPLLMLEFYFVLAAVNKANSGIFWRLMIGTLVMLIGGYLGEAGYINTTLGFVIGMAGWFYILYEVFSGEAGKNAAKSGNKALVTAFGAMRM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---AATAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGCGAAGCAGGAAAAAATGCAGCGAAA------AGT---GGAAACAAGGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NT------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKNAAK--S-GNKAL-V-T-A-F-G-AM-RM------------------------------------------------------------------------------------------------------------------------------------ [IV-Alpha8-SAR11]_FJ560846 [IV-Alpha8-SAR11] HEL133_env_samples_FJ560846 gi|223868839|gb|FJ560846| Uncultured microorganism clone HEL133 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL133 putative proteorhodopsin gene, partial cds FJ560846 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCAGTAAATAAAGCAAACTCTGGAATTTTCTGGAGATTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACACTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCAGGCGAAGCAGGAAAAAATGCAGCGAAAAGTGGAAACAAGGCTCTTGTTAAAAGCGATTTGGTGCAA TVPLLMLEFYFVLAAVNKANSGIFWRLMIGTLVMLIGGYLGEAGYINTTLGFVIGMAGWFYILYEVFSGEAGKNAAKSGNKALVKSDLVQ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---AATAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGCGAAGCAGGAAAAAATGCAGCGAAA------AGT---GGAAACAAGGCTCTT---GTT---AAA---AGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTTGGTGCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NT------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKNAAK--S-GNKAL-V-K-S---------------------------------------------------------------------------------DLVQ--------------------------------------------------------- [IV-Alpha8-SAR11]_FJ560852 [IV-Alpha8-SAR11] HEL142_env_samples_FJ560852 gi|223868851|gb|FJ560852| Uncultured microorganism clone HEL142 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL142 putative proteorhodopsin gene, partial cds FJ560852 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCAGTAAATAAAGCAAACTCTGGAATTTTCTGGAGATTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACACTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCAGGCGAAGCAGGAAAAAATGCAGCGAAAAGTGGAAACAAGGCTCTTGTTACATGCGATTTGGTGCAA TVPLLMLEFYFVLAAVNKANSGIFWRLMIGTLVMLIGGYLGEAGYINTTLGFVIGMAGWFYILYEVFSGEAGKNAAKSGNKALVTCDLVQ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---AATAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGCGAAGCAGGAAAAAATGCAGCGAAA------AGT---GGAAACAAGGCTCTT---GTT---ACA---TGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTTGGTGCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NT------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKNAAK--S-GNKAL-V-T-C---------------------------------------------------------------------------------DLVQ--------------------------------------------------------- [IV-Alpha8-SAR11]_FJ560802 [IV-Alpha8-SAR11] HEL75_env_samples_FJ560802 gi|223868751|gb|FJ560802| Uncultured microorganism clone HEL75 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL75 putative proteorhodopsin gene, partial cds FJ560802 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTTCCATTATTGATGCTAGAATTCTATTTTGTTCTTGCAGCAGTAAATAAAGCAAACTCTGGAATTTTCTGGAGATTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACACTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCAGGCGAAGCAGGAAAAAATGCAGCGAAAAGTGGAAACAAGGCTCTTGTTACATGCATTTGGTGCAATGAGAAT TVPLLMLEFYFVLAAVNKANSGIFWRLMIGTLVMLIGGYLGEAGYINTTLGFVIGMAGWFYILYEVFSGEAGKNAAKSGNKALVTCIWCNEN ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTTCCATTATTGATGCTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---AATAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGCGAAGCAGGAAAAAATGCAGCGAAA------AGT---GGAAACAAGGCTCTT---GTT---ACA---TGC---ATT------------------------------------------------------------------------------------------------------TGG---------TGCAATGAGAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NT------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKNAAK--S-GNKAL-V-T-C-I----------------------------------W---CNEN-------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11]_FJ560793 [IV-Alpha8-SAR11] HEL65_env_samples_FJ560793 gi|223868733|gb|FJ560793| Uncultured microorganism clone HEL65 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL65 putative proteorhodopsin gene, partial cds FJ560793 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTTCCATTATTGATGCTAGAATTCTATTTTGTTCTTGCAGCAGTAAATAAAGCAAACTCTGGAATTTTCTGGAGATTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACACTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCAGGCGAACCTTATGAAGAATGCAGCGAAAAGTGGAAACAAGGCTCTTCTAAGTTT TVPLLMLEFYFVLAAVNKANSGIFWRLMIGTLVMLIGGYLGEAGYINTTLGFVIGMAGWFYILYEVFSGEPYEECSEKWKQGSSKF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTTCCATTATTGATGCTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---AATAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGCGAACCTTATGAA---GAATGCAGC------GAA------------------------------------------------------------AAGTGG------AAACAA---------------------------------------------------------------GGCTCT---------TCTAAGTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NT------TLG-FVIGMAGWFYILYEV-----F--S-GEPYE-ECS--E--------------------KW--KQ---------------------GS---SKF--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11]_JX863305 [IV-Alpha8-SAR11] MALINA_OTU41_167_L_env_samples_JX863305 gi|425477560|gb|JX863305| Uncultured bacterium clone MALINA OTU41 167 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU41 167 L putative proteorhodopsin mRNA, partial cds JX863305 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 08Aug2009 3m_depth Arctic Ocean marine 70.8 -133.73 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCAGTAAATAAAGCAAGCTCTGGAGTATTCTGGAGATTGATGATTGGTACTTTAGTAATGCTAGTTGGCGGATACTTAGGAGAAGCAGGATACATCAACACTACACTTGGTTTTGTAATCGGTATGGCTGGTTGGTTCTACATTCTTTATGAAGTATTCTCAGGCGAAGCAGGAAAACTTGCAGCGAAAAGCGGAAACAAAGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTT WLITVPLLMLEFYFVLAAVNKASSGVFWRLMIGTLVMLVGGYLGEAGYINTTLGFVIGMAGWFYILYEVFSGEAGKLAAKSGNKALVTAFGAMRMIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCA---------GTA---AATAAAGCAAGCTCT---GGAGTA------------------------------------TTCTGGAGA---TTGATGATTGGTACTTTAGTAATGCTAGTTGGCGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGTTGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGCGAAGCAGGAAAACTTGCAGCGAAA------AGC---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMLEFYFVLAA---V-NKASS-GV------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NT------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKLAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11]_JX863307 [IV-Alpha8-SAR11] MALINA_OTU41_269_L_env_samples_JX863307 gi|425477564|gb|JX863307| Uncultured bacterium clone MALINA OTU41 269 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU41 269 L putative proteorhodopsin mRNA, partial cds JX863307 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 11Aug2009 3m_depth Arctic Ocean marine 70.68 -139.62 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCAGTAAATAAAGCAAACTCTGGAGTATTCTGGAGATTGATGATTGGTACTTTAGTAATGCTAGTTGGCGGATACTTAGGAGAAGCAGGATACATCAACACTACACTTGGTTTTGTAATCGGTATGGCTGGTTGGTTCTACATTCTTTATGAAGTATTCTCAGGCGAAGCAGGAAAACTTGCAGCGAAAAGCGGAAACAAAGCTCTTGTTACCGCATTTGGTGCAATGAAAATGATCGTTACAGTT WLITVPLLMLEFYFVLAAVNKANSGVFWRLMIGTLVMLVGGYLGEAGYINTTLGFVIGMAGWFYILYEVFSGEAGKLAAKSGNKALVTAFGAMKMIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCA---------GTA---AATAAAGCAAACTCT---GGAGTA------------------------------------TTCTGGAGA---TTGATGATTGGTACTTTAGTAATGCTAGTTGGCGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGTTGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGCGAAGCAGGAAAACTTGCAGCGAAA------AGC---GGAAACAAAGCTCTT---GTT---ACC---GCA---TTT---GGT---GCAATG---AAAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMLEFYFVLAA---V-NKANS-GV------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NT------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKLAAK--S-GNKAL-V-T-A-F-G-AM-KMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11]_JX863306 [IV-Alpha8-SAR11] MALINA_OTU41_326_L_env_samples_JX863306 gi|425477562|gb|JX863306| Uncultured bacterium clone MALINA OTU41 326 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU41 326 L putative proteorhodopsin mRNA, partial cds JX863306 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 02Aug2009 40m_depth Arctic Ocean marine 69.61 -138.23 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCAGTAAATAAAGCAAACTCTGGAGTATTCTGGAGATTGATGATTGGTACTTTAGTAATGCTAGTTGGCGGATACTTAGGAGAAGCAGGATACATCAACACTACACTTGGTTTTGTAATCGGTATGGCTGGTTGGTTCTACATTCTTTATGAAGTATTCTCAGGCGAAGCAGGAAAACTTGCAGCGAAAAGTGGAAACAAAGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTT WLITVPLLMLEFYFVLAAVNKANSGVFWRLMIGTLVMLVGGYLGEAGYINTTLGFVIGMAGWFYILYEVFSGEAGKLAAKSGNKALVTAFGAMRMIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCA---------GTA---AATAAAGCAAACTCT---GGAGTA------------------------------------TTCTGGAGA---TTGATGATTGGTACTTTAGTAATGCTAGTTGGCGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGTTGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGCGAAGCAGGAAAACTTGCAGCGAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMLEFYFVLAA---V-NKANS-GV------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NT------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKLAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11]_JX863309 [IV-Alpha8-SAR11] MALINA_OTU41_284_L_env_samples_JX863309 gi|425477568|gb|JX863309| Uncultured bacterium clone MALINA OTU41 284 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU41 284 L putative proteorhodopsin mRNA, partial cds JX863309 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 02Aug2009 40m_depth Arctic Ocean marine 69.61 -138.23 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCAGTAAATAAAGCAAACTCTGGAGTATTCTGGAGATTGGTGATTGGTACTTTAGTAATGCTAGTTGGCGGATACTTAGGAGAAGCAGGATACATCAACACTACACTTGGTTTTGTAATCGGTATGGCTGGTTGGTTCTACATTCTTTATGAAGTATACTCAGGCGAAGCAGGAAAACTTGCAGCGAAAAGTGGAAACAAAGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTT WLITVPLLMLEFYFVLAAVNKANSGVFWRLVIGTLVMLVGGYLGEAGYINTTLGFVIGMAGWFYILYEVYSGEAGKLAAKSGNKALVTAFGAMRMIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCA---------GTA---AATAAAGCAAACTCT---GGAGTA------------------------------------TTCTGGAGA---TTGGTGATTGGTACTTTAGTAATGCTAGTTGGCGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGTTGGTTCTACATTCTTTATGAAGTA---------------TAC------TCA---GGCGAAGCAGGAAAACTTGCAGCGAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMLEFYFVLAA---V-NKANS-GV------------FWR-LVIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NT------TLG-FVIGMAGWFYILYEV-----Y--S-GEAGKLAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11]_JX863308 [IV-Alpha8-SAR11] MALINA_OTU41_283_L_env_samples_JX863308 gi|425477566|gb|JX863308| Uncultured bacterium clone MALINA OTU41 283 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU41 283 L putative proteorhodopsin mRNA, partial cds JX863308 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 02Aug2009 40m_depth Arctic Ocean marine 69.61 -138.23 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATTACAGTTCCATTATTGATGTTAGAATTCTATCTTGTTCTAGCAGCAGTAAATAAAGCAAACTCTGGAGTATTCTGGAGATTGATGATTGGTACTTTAGTAATGCTAGTTGGCGGATACTTAGGAGAAGCAGGATACATCAACACTACACTTGGTTTTGTAATCGGTATGGCTGGTTGGTTCTACATTCTTTATGAAGTATTCTCAGGCGAAGCAGGAAAACTTGCAGCGAAAAGTGGAAACAAAGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTT WLITVPLLMLEFYLVLAAVNKANSGVFWRLMIGTLVMLVGGYLGEAGYINTTLGFVIGMAGWFYILYEVFSGEAGKLAAKSGNKALVTAFGAMRMIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATCTTGTTCTAGCAGCA---------GTA---AATAAAGCAAACTCT---GGAGTA------------------------------------TTCTGGAGA---TTGATGATTGGTACTTTAGTAATGCTAGTTGGCGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGTTGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGCGAAGCAGGAAAACTTGCAGCGAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMLEFYLVLAA---V-NKANS-GV------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NT------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKLAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11]_1105112584468 [IV-Alpha8-SAR11] JCVI_ORF_1105112584468_GS010_Coastal_1m jcvi|1105112584468| 1105112584468 JCVI ORF 1105112584468 1105112584468 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 18-nov-03 Coastal/1m_depth/S_31_psu/GS010/Cape_May/NJ/North_American_East_Coast Atlantic Ocean marine 38.94 -74.685 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCCTTATGGGTGTTACAGGTGTAGCAAACGCAGAAACTGCACTGTTAGCTTCTGATGACTTTGTCGGAATTTCGTTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCAGTTCCAGCTGGCTGGAGAGTTTCAATAACTGTTGCAGGACTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGATGTGTGGATCATGACTGGTGAGTCACCAACAGTATACAGATATATTGACTGGTTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCAGTAAATAAAGCAAACTCTGGAATATTCTGGAGATTGATGATTGGTACTTTAGTAATGTTAGTCGGTGGATACTTAGGAGAAGCAGGATACATTAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTGTTTTCAGGTGAAGCAGGTAAAAATGCAGCAAAGAGCGGAAACAAAGCTCTTGTTACTGCATTTGGTGCTATGAGAATGATCGTTACAGTTGGTTGGGCTATTTACCCATTAGGTTATGTATTTGGTTACCTAACAGGTGGTGTAGATGCTAACGCGCTAAACGTGATTTACAATGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGCAACAACCTGGTAGAGCTCAGCTA MKKLKLFALTAVALMGVTGVANAETALLASDDFVGISFWLVSMALLASTAFFFIERASVPAGWRVSITVAGLVTGIAFIHYMYMRDVWIMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKANSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFVIGMAGWFYILYEVFSGEAGKNAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDANALNVIYNAADFLNKIAFGLIIWAAAMQQPGRAQL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCCTTATGGGTGTTACAGGTGTAGCAAACGCAGAAACTGCA---CTGTTAGCTTCTGATGACTTTGTCGGAATTTCGTTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCAGTTCCAGCT---GGCTGGAGAGTTTCAATAACTGTTGCAGGACTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGATGTGTGGATC------------------------------ATGACT---------------------GGTGAGTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---AATAAAGCAAACTCT---GGAATA------------------------------------TTCTGGAGA---TTGATGATTGGTACTTTAGTAATGTTAGTCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTG---------------TTT------TCA---GGTGAAGCAGGTAAAAATGCAGCAAAG------AGC---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCTATG---AGAATGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTATGTATTTGGTTACCTA---------------------------------------ACAGGTGGTGTAGATGCTAACGCGCTAAACGTGATTTACAATGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGCAACAA---CCTGGTAGAGCTCAGCTA--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALTAVALMGVTGVANAETA-LLASDDFVGISFWLVSMALLASTAFFFIERASVPA-GWRVSITVAGLVTGIAFIHYMYMRDVWI----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKNAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANALNVIYNAADFLNKIAFGLIIWAAAMQQ-PGRAQL----------------------------------- [IV-Alpha8-SAR11]_1105119206910 [IV-Alpha8-SAR11] JCVI_ORF_1105119206910_GS010_Coastal_1m jcvi|1105119206910| 1105119206910 JCVI ORF 1105119206910 1105119206910 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 18-nov-03 Coastal/1m_depth/S_31_psu/GS010/Cape_May/NJ/North_American_East_Coast Atlantic Ocean marine 38.94 -74.685 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TTGCTCTACAGCTGTAGCCTTATGGGTGTTACAGGTGTAGCAAACGCAGAAACTGCACTGTTAGCTTCTGATGACTTTGTCGGAATTTCGTTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCAGTTCCAGCTGGCTGGAGAGTTTCAATAACTGTTGCAGGACTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGATGTGTGGATCATGACTGGTGAGTCACCAACAGTATACAGATATATTGACTGGTTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCAGTAAATAAAGCAAACTCTGGAATATTCTGGAGATTGATGATTGGTACTTTAGTAATGTTAGTCGGTGGATACTTAGGAGAAGCAGGATACATTAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTGTTTTCAGGTGAAGCAGGTAAAAATGCAGCAAAGAGCGGAAACAAAGCTCTTGTTACTGCATTTGGTGCTATGAGAATGATCGTTACAGTTGGTTGGGCTATTTACCCATTAGGTTATGTATTTGGTTACCTAACAGGTGGTGTAGATGCTAACGCGCTAAACGTGATTTACAATGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGCAACAACCTGGTAGAGCTAAGAAG LLYSCSLMGVTGVANAETALLASDDFVGISFWLVSMALLASTAFFFIERASVPAGWRVSITVAGLVTGIAFIHYMYMRDVWIMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKANSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFVIGMAGWFYILYEVFSGEAGKNAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTGGVDANALNVIYNAADFLNKIAFGLIIWAAAMQQPGRAKK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTCTACAGCTGTAGCCTTATGGGTGTTACAGGTGTAGCAAACGCAGAAACTGCA---CTGTTAGCTTCTGATGACTTTGTCGGAATTTCGTTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCAGTTCCAGCT---GGCTGGAGAGTTTCAATAACTGTTGCAGGACTAGTAACTGGTATTGCATTCATACACTACATGTACATGAGAGATGTGTGGATC------------------------------ATGACT---------------------GGTGAGTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---AATAAAGCAAACTCT---GGAATA------------------------------------TTCTGGAGA---TTGATGATTGGTACTTTAGTAATGTTAGTCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTG---------------TTT------TCA---GGTGAAGCAGGTAAAAATGCAGCAAAG------AGC---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCTATG---AGAATGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTATGTATTTGGTTACCTA---------------------------------------ACAGGTGGTGTAGATGCTAACGCGCTAAACGTGATTTACAATGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGCAACAA---CCTGGTAGAGCTAAGAAG--------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------LLYSCSLMGVTGVANAETA-LLASDDFVGISFWLVSMALLASTAFFFIERASVPA-GWRVSITVAGLVTGIAFIHYMYMRDVWI----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKNAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TGGVDANALNVIYNAADFLNKIAFGLIIWAAAMQQ-PGRAKK----------------------------------- [IV-Alpha8-SAR11]_1105083174668 [IV-Alpha8-SAR11] JCVI_ORF_1105083174668_GS002_Coastal_1m jcvi|1105083174668| 1105083174668 JCVI ORF 1105083174668 1105083174668 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 21-AUG-2003 Coastal/1m_depth/S_29.2_psu/GS002/Gulf_of_Maine/North_American_East_Coast Atlantic Ocean marine 42.503056 -67.24 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCCTTATGGGTGTTACAGGTGTAGCAAACGCAGAAACTGCACTGTTAGCTTCTGATGACTTTGTCGGAATTTCGTTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCAGTTCCAGCTGGCTGGAGAGTTTCAATAACTGTTGCAGGACTAGTAACTGGTATTGCATTCATACATTACATGTACATGAGAGATGTGTGGATCATGACTGGTGAGTCACCAACAGTATACAGATATATTGACTGGTTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCAGTAAATAAAGCAAACTCTGGAATATTCTGGAGATTGATGATTGGTACTTTAGTAATGTTAGTCGGTGGATACTTAGGAGAAGCAGGATACATTAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTGTTTTCAGGTGAAGCAGGTAAAAATGCAGCAAAGAGCGGAAACAAAGCTCTTGTTACTGCATTTGGTGCTATGAGAATGATCGTTACAGTTGGTTGGGCTATTTACCCATTAGGTTATGTATTTGGTTACCTAACAAGTGGTGTAGATGCTAACGCGCTAAACGTGATTTACAATGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGCAACAACCTGGTAGAGCTAAGAAG MKKLKLFALTAVALMGVTGVANAETALLASDDFVGISFWLVSMALLASTAFFFIERASVPAGWRVSITVAGLVTGIAFIHYMYMRDVWIMTGESPTVYRYIDWLITVPLLMLEFYFVLAAVNKANSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFVIGMAGWFYILYEVFSGEAGKNAAKSGNKALVTAFGAMRMIVTVGWAIYPLGYVFGYLTSGVDANALNVIYNAADFLNKIAFGLIIWAAAMQQPGRAKK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAAACTAAAATTGTTTGCTCTTACAGCTGTAGCCCTTATGGGTGTTACAGGTGTAGCAAACGCAGAAACTGCA---CTGTTAGCTTCTGATGACTTTGTCGGAATTTCGTTCTGGCTTGTGTCAATGGCGTTATTAGCGTCAACGGCATTCTTTTTTATTGAAAGAGCATCAGTTCCAGCT---GGCTGGAGAGTTTCAATAACTGTTGCAGGACTAGTAACTGGTATTGCATTCATACATTACATGTACATGAGAGATGTGTGGATC------------------------------ATGACT---------------------GGTGAGTCACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---AATAAAGCAAACTCT---GGAATA------------------------------------TTCTGGAGA---TTGATGATTGGTACTTTAGTAATGTTAGTCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTG---------------TTT------TCA---GGTGAAGCAGGTAAAAATGCAGCAAAG------AGC---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCTATG---AGAATGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATTTACCCATTAGGTTATGTATTTGGTTACCTA---------------------------------------ACAAGTGGTGTAGATGCTAACGCGCTAAACGTGATTTACAATGCAGCTGACTTTTTGAACAAGATCGCTTTTGGTCTAATCATTTGGGCAGCAGCAATGCAACAA---CCTGGTAGAGCTAAGAAG--------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MKKLKLFALTAVALMGVTGVANAETA-LLASDDFVGISFWLVSMALLASTAFFFIERASVPA-GWRVSITVAGLVTGIAFIHYMYMRDVWI----------MT-------GESPTVYRYIDW--------LITVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKNAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYPLGYVFGYL-------------TSGVDANALNVIYNAADFLNKIAFGLIIWAAAMQQ-PGRAKK----------------------------------- [IV-Alpha8-SAR11]_FJ560866 [IV-Alpha8-SAR11] HEL158_env_samples_FJ560866 gi|223868879|gb|FJ560866| Uncultured microorganism clone HEL158 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL158 putative proteorhodopsin gene, partial cds FJ560866 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTTCCACTATTGATGCTAGAATTCTATTTTGTTCTTGCAGCAGTAGGTAAAGCAAACTCTGGAGTATTCTGGAGATTAATGCTTGGTACTTTGGTAATGCTAGTTGGAGGATACTTAGGAGAAGCAGGTTACATCAATTCTATGCTTGGTTTCATTATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTTTCAGGTGAAGCAGGTAAAATGGCAGCGAAAAGTGGAAACAAAGCTCTTGTTACTGCGTTTGGTGCTATGAGAATG TVPLLMLEFYFVLAAVGKANSGVFWRLMLGTLVMLVGGYLGEAGYINSMLGFIIGMAGWIYILYEVFSGEAGKMAAKSGNKALVTAFGAMRM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTTCCACTATTGATGCTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---GGTAAAGCAAACTCT---GGAGTA------------------------------------TTCTGGAGA---TTAATGCTTGGTACTTTGGTAATGCTAGTTGGAGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATTCT------------------ATGCTTGGT---TTCATTATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTT------TCA---GGTGAAGCAGGTAAAATGGCAGCGAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCG---TTT---GGT---GCTATG---AGAATG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMLEFYFVLAA---V-GKANS-GV------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NS------MLG-FIIGMAGWIYILYEV-----F--S-GEAGKMAAK--S-GNKAL-V-T-A-F-G-AM-RM------------------------------------------------------------------------------------------------------------------------------------ [IV-Alpha8-SAR11]_FJ560794 [IV-Alpha8-SAR11] HEL66_env_samples_FJ560794 gi|223868735|gb|FJ560794| Uncultured microorganism clone HEL66 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL66 putative proteorhodopsin gene, partial cds FJ560794 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTTCCACTATTGATGCTAGAATTCTATTTTGTTCTTGCAGCAGTAGGTAAAGCAAACTCTGGAGTATTCTGGAGATTAATGCTTGGTACTTTGGTAATGCTAGTTGGAGGATACTTAGGAGAAGCAGGTTACATCAATTCTATGCTTGGTTTCATTATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTTTCAGGTGAAGCAGGTAAAATGGCAGCGAAAAGTGGAAACAAAGCTCTTGTTAAATGGGGTTGGTGCTATGAG TVPLLMLEFYFVLAAVGKANSGVFWRLMLGTLVMLVGGYLGEAGYINSMLGFIIGMAGWIYILYEVFSGEAGKMAAKSGNKALVKWGWCYE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTTCCACTATTGATGCTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---GGTAAAGCAAACTCT---GGAGTA------------------------------------TTCTGGAGA---TTAATGCTTGGTACTTTGGTAATGCTAGTTGGAGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATTCT------------------ATGCTTGGT---TTCATTATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTT------TCA---GGTGAAGCAGGTAAAATGGCAGCGAAA------AGT---GGAAACAAAGCTCTT---GTT------------------------------------------------AAATGG---------------------------------------------------------------GGTTGG---------TGCTATGAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMLEFYFVLAA---V-GKANS-GV------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NS------MLG-FIIGMAGWIYILYEV-----F--S-GEAGKMAAK--S-GNKAL-V----------------KW---------------------GW---CYE--------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11]_KJ926211 [IV-Alpha8-SAR11] RHOMEO_AG_OTU26 gb|KJ926211| Uncultured bacterium cloneRHOMEO AG OTU26 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU26 putative proteorhodopsin gene, partial cds KJ926211 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGTTAATTACAGTTCCACTATTGACGCTAGAATTCTATTTTGTTCTTGCAGCAGTAGGTAAAGCAAACTCTGGAGTATTCTGGAGATTAATGCTTGGTACTTTAGTAATGCTAGTTGGAGGATACTTAGGAGAAGCAGGTTACATCAATTCTATGCTTGGTTTCATTATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTTTCAGGTGAAGCAGGTAAAATGGCAGCGAAAAGTGGAAACAAAGCTCTTGTTACTGCGTTTGGTGCTATGAGAATGATCGTTACAGTT WLITVPLLTLEFYFVLAAVGKANSGVFWRLMLGTLVMLVGGYLGEAGYINSMLGFIIGMAGWIYILYEVFSGEAGKMAAKSGNKALVTAFGAMRMIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATTACAGTTCCACTATTGACGCTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---GGTAAAGCAAACTCT---GGAGTA------------------------------------TTCTGGAGA---TTAATGCTTGGTACTTTAGTAATGCTAGTTGGAGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATTCT------------------ATGCTTGGT---TTCATTATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTT------TCA---GGTGAAGCAGGTAAAATGGCAGCGAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCG---TTT---GGT---GCTATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLTLEFYFVLAA---V-GKANS-GV------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NS------MLG-FIIGMAGWIYILYEV-----F--S-GEAGKMAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11]_JX863304 [IV-Alpha8-SAR11] MALINA_OTU41_132_L_env_samples_JX863304 gi|425477558|gb|JX863304| Uncultured bacterium clone MALINA OTU41 132 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU41 132 L putative proteorhodopsin mRNA, partial cds JX863304 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 08Aug2009 50m_depth Arctic Ocean marine 70.8 -133.73 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATTACAGTTCCATTATTGATGTTAGAGTTCTATTTTGTTCTAGCAGCAGTAGGTAAAGCAAATTCTAGAGTATTCTGGAGATTGTTATTAGGATCATTAGTAATGTTAATCGGCGGATACTCAGGAGAAGCAGGGTACATCAACTCTACACTTGGTTTCGTAATCGGTATGGCTGGTTGGTTCTACATTCTTTATGAAGTATTTTCAGGAGAAGCAGGAAAAATGGCAGCAAAAAGTGGAAACAAAGCTTTTGTTACTGCATTTGGTGCTATGAGAATGATCGTTACAGTT WLITVPLLMLEFYFVLAAVGKANSRVFWRLLLGSLVMLIGGYSGEAGYINSTLGFVIGMAGWFYILYEVFSGEAGKMAAKSGNKAFVTAFGAMRMIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATTACAGTTCCATTATTGATGTTAGAGTTCTATTTTGTTCTAGCAGCA---------GTA---GGTAAAGCAAATTCT---AGAGTA------------------------------------TTCTGGAGA---TTGTTATTAGGATCATTAGTAATGTTAATCGGCGGATACTCAGGAGAA---------GCA------------------GGG------TAC---------------------------------ATC------------------------------------------------------------------AACTCT------------------ACACTTGGT---TTCGTAATCGGTATGGCTGGTTGGTTCTACATTCTTTATGAAGTA---------------TTT------TCA---GGAGAAGCAGGAAAAATGGCAGCAAAA------AGT---GGAAACAAAGCTTTT---GTT---ACT---GCA---TTT---GGT---GCTATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMLEFYFVLAA---V-GKANS-RV------------FWR-LLLGSLVMLIGGYSGE---A------G--Y-----------I----------------------NS------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKMAAK--S-GNKAF-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11]_JX863303 [IV-Alpha8-SAR11] MALINA_OTU41_146_L_env_samples_JX863303 gi|425477556|gb|JX863303| Uncultured bacterium clone MALINA OTU41 146 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU41 146 L putative proteorhodopsin mRNA, partial cds JX863303 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 08Aug2009 50m_depth Arctic Ocean marine 70.8 -133.73 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATTACAGTTCCATTATTGATGTTAGAGTTCTATTTTGTTCTAGCAGCAGTAGGTAAAGCAAACTCTAGAGTATTCTGGAGATTGTTATTAGGATCATTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACTCTACACTTGGTTTCGTAATCGGTATGGCTGGTTGGTTCTACATTCTTTATGAAGTATTTTCAGGAGAAGCAGGAAAAATGGCAGCAAAAAGTGGAAACAAAGCTTTTGTTACTGCATTTGGTGCTATGAGAATGATCGTTACAGTT WLITVPLLMLEFYFVLAAVGKANSRVFWRLLLGSLVMLIGGYLGEAGYINSTLGFVIGMAGWFYILYEVFSGEAGKMAAKSGNKAFVTAFGAMRMIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATTACAGTTCCATTATTGATGTTAGAGTTCTATTTTGTTCTAGCAGCA---------GTA---GGTAAAGCAAACTCT---AGAGTA------------------------------------TTCTGGAGA---TTGTTATTAGGATCATTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACTCT------------------ACACTTGGT---TTCGTAATCGGTATGGCTGGTTGGTTCTACATTCTTTATGAAGTA---------------TTT------TCA---GGAGAAGCAGGAAAAATGGCAGCAAAA------AGT---GGAAACAAAGCTTTT---GTT---ACT---GCA---TTT---GGT---GCTATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMLEFYFVLAA---V-GKANS-RV------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NS------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKMAAK--S-GNKAF-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8]_DQ903172 [IV-Alpha8] clone_HB10090_DQ903172 gi|116294073|gb|DQ903172| Uncultured bacterium clone HB10090 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone HB10090 putative proteorhodopsin gene, partial cds. DQ903172 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na East China Sea surface water (ECS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na GTATTAGCGGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCTGGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATCATGACTGGTGACTCACCAACTGTTTACAGATATATTGACTGGTTAATTACTGTGCCTCTACAAATGGTTGAATTCTATTTAATTCTATCTGCTGTAGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGCTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAAGCTGCAGCAAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTAGGTTGGGCAATCTACCCA VLAATVFFFLERSSVPAGWRVSMTVAGLVTGIAFVHYMYMRDVWIMTGDSPTVYRYIDWLITVPLQMVEFYLILSAVGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGGCTACTGTATTCTTCTTCTTAGAAAGAAGTTCGGTTCCAGCT---GGATGGAGAGTTTCAATGACTGTTGCTGGTCTAGTAACTGGTATTGCATTCGTACACTACATGTACATGAGAGATGTATGGATC------------------------------ATGACT---------------------GGTGACTCACCAACTGTTTACAGATATATTGACTGG------------------------TTAATTACTGTGCCTCTACAAATGGTTGAATTCTATTTAATTCTATCTGCT---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGCTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------VLAATVFFFLERSSVPA-GWRVSMTVAGLVTGIAFVHYMYMRDVWI----------MT-------GDSPTVYRYIDW--------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha8]_KJ926097 [IV-Alpha8] BOUM_OTU010_env_samples gb|KJ926097| Uncultured bacterium clone BOUM OTU010 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU010 putative proteorhodopsin gene, partial cds KJ926097 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 43.4235 7.8533 #na #na #na #na #na GTAGACTGGTTAATTACAGTGCCACTACAAATGGTAGAATTTTATTTAATTCTAGCAGCTGTAGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGCTACTTGGTTCAGTAGTGATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGTTAAATGCATCAAGTGGAAACGCTGCTGCACAACAAGCATTTAGCACAATTCGTTTGATTGTGACTGTCGGGTGGGCAATATAC VDWLITVPLQMVEFYLILAAVGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKLNASSGNAAAQQAFSTIRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGACTGG------------------------TTAATTACAGTGCCACTACAAATGGTAGAATTTTATTTAATTCTAGCAGCT---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGCTACTTGGTTCAGTAGTGATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGTTAAATGCATCA------AGT---GGAAACGCTGCTGCA---CAA---CAA---GCA---TTT---AGC---ACAATT---CGTTTGATTGTGACTGTC---------------------------------------------------------------GGGTGG---------GCAATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPLQMVEFYLILAA---V-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-Q-A-F-S-TI-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916092 [IV-Gamma5-SAR86c] clone_BH01-14_EU916092 gi|229359064|gb|EU916092| Uncultured bacterium clone BH01-14 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone BH01-14 putative proteorhodopsin gene, partial cds. EU916092 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATAGTAGGTTGGGCGATA LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIIVGWAI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATAGTA---------------------------------------------------------------GGTTGG---------GCGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIV---------------------GW---AI---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916089 [IV-Gamma5-SAR86c] clone_BH01-6_EU916089 gi|229359058|gb|EU916089| Uncultured bacterium clone BH01-6 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone BH01-6 putative proteorhodopsin gene, partial cds. EU916089 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAGTTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCACGGTTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCGTAGTAGGTTGGGCGATA LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLVLAAANVAGSLFKKLLVGSLVMLVFGYMGEAGITVAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIVVGWAI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAGTTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ACG------------------------------------------------------------------GTTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCGTAGTA---------------------------------------------------------------GGTTGG---------GCGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLVLAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------T----------------------VA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIVV---------------------GW---AI---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916108 [IV-Gamma5-SAR86c] clone_UDBH01-3_EU916108 gi|229359096|gb|EU916108| Uncultured bacterium clone UDBH01-3 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone UDBH01-3 putative proteorhodopsin gene, partial cds. EU916108 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAACGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTGCTTAATTCTTGCTGCTGCAAATGTTGCCGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCGTAGTAGGTACTGCG LASTVFFFVERDRVSAKRKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESCLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIVVGTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAACGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTGCTTAATTCTTGCTGCT---------GCA------AATGTTGCCGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCGTAGTA---------------------------------------------------------------GGTACT---------GCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KRKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESCLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIVV---------------------GT---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916105 [IV-Gamma5-SAR86c] clone_BH46-35_EU916105 gi|229359090|gb|EU916105| Uncultured bacterium clone BH46-35 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone BH46-35 putative proteorhodopsin gene, partial cds. EU916105 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGCTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCGTCGTAGGATGGGCG LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVLGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIVVGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGCTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCGTCGTA---------------------------------------------------------------GGATGG---------GCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVLGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIVV---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916087 [IV-Gamma5-SAR86c] clone_BH46-5_EU916087 gi|229359055|gb|EU916087| Uncultured bacterium clone BH46-5 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone BH46-5 putative proteorhodopsin gene, partial cds. EU916087 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TATTTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATTATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCGTAGTCGGATGGGCTATA YLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGLLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIVVGWAI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TTATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCGTAGTC---------------------------------------------------------------GGATGG---------GCTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------YLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-LL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIVV---------------------GW---AI---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916110 [IV-Gamma5-SAR86c] clone_UDBH23-1_EU916110 gi|229359099|gb|EU916110| Uncultured bacterium clone UDBH23-1 putative proteorhodopsin-like gene, partial sequence. Uncultured bacterium clone UDBH23-1 putative proteorhodopsin-like gene, partial sequence. EU916110 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na GGTCATGTACGAGTCGACGATTACTCGGTCGCTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGAAACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAACTAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTACACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACGAATGATGTATATTATCGATCATTCCAGCG GHVRVDDYSVASFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICESYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVHMIYELWAGEGKSACNTASPAVQSAHNTNDVYYRSFQ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCATGTACGAGTCGACGATTACTCGGTCGCTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT------------------------------GAA---------------------ACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA---ACTAATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTACACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACGAATGATGTATATTATCGATCATTC---------------------------------------------------------------CAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------------------------------GHVRVDDYSVASFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICESYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVHMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TNDVYYRSF---------------------Q---------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916111 [IV-Gamma5-SAR86c] clone_UDBH23-2_EU916111 gi|229359100|gb|EU916111| Uncultured bacterium clone UDBH23-2 putative proteorhodopsin-like gene, partial sequence. Uncultured bacterium clone UDBH23-2 putative proteorhodopsin-like gene, partial sequence. EU916111 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na GGTGATCTAGATGTTGGTGATCTCACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGAAACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAACTAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCACGTAATACCGCAAGTCCTGCTGTGCAATCAGCTCACAACACGAATGATGTATATTATCGATCATTCCAGCG GDLDVGDLTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICESYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSARNTASPAVQSAHNTNDVYYRSFQ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGATCTAGATGTTGGTGATCTCACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT------------------------------GAA---------------------ACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA---ACTAATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCACGTAAT------ACC---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACGAATGATGTATATTATCGATCATTC---------------------------------------------------------------CAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------------------------------GDLDVGDLTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICESYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSARN--T-ASPAV-Q-S-A-H-N-TNDVYYRSF---------------------Q---------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916109 [IV-Gamma5-SAR86c] clone_UDBH21-3_EU916109 gi|229359098|gb|EU916109| Uncultured bacterium clone UDBH21-3 putative proteorhodopsin-like gene, partial sequence. Uncultured bacterium clone UDBH21-3 putative proteorhodopsin-like gene, partial sequence. EU916109 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na GGTGATCTTGATTCTGGTGACACCACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACCGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGAAACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAACTAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGGATGTATATATCGATTCGTATGAGCCG GDLDSGDTTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICESYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMDVYIDSYEP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGATCTTGATTCTGGTGACACCACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACCGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT------------------------------GAA---------------------ACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA---ACTAATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATGGATGTATATATCGATTCGTAT---------------------------------------------------------------GAGCCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------GDLDSGDTTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICESYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TMDVYIDSY---------------------EP--------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916088 [IV-Gamma5-SAR86c] clone_BH21-12_EU916088 gi|229359057|gb|EU916088| Uncultured bacterium clone BH21-12 putative proteorhodopsin-like gene, partial sequence. Uncultured bacterium clone BH21-12 putative proteorhodopsin-like gene, partial sequence. EU916088 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na GGCGACCTTGATACTGGTGACCCCACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGCTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGAAACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAACTAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCTGTATTGAGCGCTAT GDLDTGDPTGVSFWLVTAALLASTVFFFVERDRASAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICESYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIICIERY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCGACCTTGATACTGGTGACCCCACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGCTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT------------------------------GAA---------------------ACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA---ACTAATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCTGTATT---------------------------------------------------------------GAGCGC---------TAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------GDLDTGDPTGVSFWLVTAALLASTVFFFVERDRASA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICESYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIICI---------------------ER---Y----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916097 [IV-Gamma5-SAR86c] clone_BH23-5_EU916097 gi|229359074|gb|EU916097| Uncultured bacterium clone BH23-5 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone BH23-5 putative proteorhodopsin gene, partial cds. EU916097 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAACGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCCTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATGTTATCGTATTCGGATGGGCGATA LASTVFFFVERDRVSAKRKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMPVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYVIVFGWAI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAACGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCCTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATGTTATCGTATTC---------------------------------------------------------------GGATGG---------GCGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KRKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMPVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYVIVF---------------------GW---AI---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916094 [IV-Gamma5-SAR86c] clone_BH21-17_EU916094 gi|229359068|gb|EU916094| Uncultured bacterium clone BH21-17 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone BH21-17 putative proteorhodopsin gene, partial cds. EU916094 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGGAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTCCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCGCAACACAATGATGTATATTATCATATTAGGATGGGCGATA LASTVFFFVGRDRVSAKWKTSLTVSGLVTGIASWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSARNTMMYIIILGWAI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGGAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTCCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CGC---AAC---ACAATG---ATGTATATTATCATATTA---------------------------------------------------------------GGATGG---------GCGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVGRDRVSA-KWKTSLTVSGLVTGIASWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-R-N-TM-MYIIIL---------------------GW---AI---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916049 [IV-Gamma5-SAR86c] clone_UM7-39_EU916049 gi|229358979|gb|EU916049| Uncultured bacterium clone UM7-39 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone UM7-39 putative proteorhodopsin gene, partial cds. EU916049 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGGTAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATTATCATATTCGGATGGGCAATA LASTVFFFVERGRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGGTAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCATATTC---------------------------------------------------------------GGATGG---------GCAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERGRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AI---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916100 [IV-Gamma5-SAR86c] clone_BH23-15_EU916100 gi|229359080|gb|EU916100| Uncultured bacterium clone BH23-15 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone BH23-15 putative proteorhodopsin gene, partial cds. EU916100 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump G97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAACGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGGTTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTCGGATGGGCAATA LASTVFFFVERDRVSAKRKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIGWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIIFGWAI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAACGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGGTTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTC---------------------------------------------------------------GGATGG---------GCAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KRKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIGW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AI---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916046 [IV-Gamma5-SAR86c] clone_UM7-26_EU916046 gi|229358973|gb|EU916046| Uncultured bacterium clone UM7-26 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone UM7-26 putative proteorhodopsin gene, partial cds. EU916046 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAGTCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATTATCATCGTCGGATGGGCAATA LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGVMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIVGWAI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------GTC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCATCGTC---------------------------------------------------------------GGATGG---------GCAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--V-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIV---------------------GW---AI---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916048 [IV-Gamma5-SAR86c] clone_UM7-37_EU916048 gi|229358977|gb|EU916048| Uncultured bacterium clone UM7-37 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone UM7-37 putative proteorhodopsin gene, partial cds. EU916048 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGTAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCGTCTTCGGATGGGCAATA LASTVFFFVERDRVSVKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIVFGWAI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGTA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCGTCTTC---------------------------------------------------------------GGATGG---------GCAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSV-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIVF---------------------GW---AI---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916093 [IV-Gamma5-SAR86c] clone_BH01-16_EU916093 gi|229359066|gb|EU916093| Uncultured bacterium clone BH01-16 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone BH01-16 putative proteorhodopsin gene, partial cds. EU916093 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATTGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTCGGTTCTCTTGTTATGCTTGTGTTTGGTTACATAGGTGAAGCAGGGATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCGTTTTCGGTTGGGCTATA LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVLIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYIGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIVFGWAI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATTGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTCGGTTCTCTTGTTATGCTTGTGTTTGGTTACATAGGTGAA---------GCA------------------GGG------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCGTTTTC---------------------------------------------------------------GGTTGG---------GCTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVLI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYIGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIVF---------------------GW---AI---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916106 [IV-Gamma5-SAR86c] clone_BH46-14_EU916106 gi|229359092|gb|EU916106| Uncultured bacterium clone BH46-14 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone BH46-14 putative proteorhodopsin gene, partial cds. EU916106 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCGTCTTCGGTTGGGCAATA LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIVFGWAI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCGTCTTC---------------------------------------------------------------GGTTGG---------GCAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIVF---------------------GW---AI---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916112 [IV-Gamma5-SAR86c] clone_UDBH46-3_EU916112 gi|229359101|gb|EU916112| Uncultured bacterium clone UDBH46-3 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone UDBH46-3 putative proteorhodopsin gene, partial cds. EU916112 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTGTTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCGTCTTAGGTTGGGCTATA LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIVGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIVLGWAI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTGTTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCGTCTTA---------------------------------------------------------------GGTTGG---------GCTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIVGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIVL---------------------GW---AI---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916107 [IV-Gamma5-SAR86c] clone_UDBH01-2_EU916107 gi|229359094|gb|EU916107| Uncultured bacterium clone UDBH01-2 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone UDBH01-2 putative proteorhodopsin gene, partial cds. EU916107 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTATTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGTTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCGTCTTCGGATGGGCGATA LASIVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMVAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIVFGWAI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTATTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GTTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCGTCTTC---------------------------------------------------------------GGATGG---------GCGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LASIVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------VA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIVF---------------------GW---AI---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916040 [IV-Gamma5-SAR86c] clone_UM7-13_EU916040 gi|229358961|gb|EU916040| Uncultured bacterium clone UM7-13 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone UM7-13 putative proteorhodopsin gene, partial cds. EU916040 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGACTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATTGTCTTCGGATGGGCG LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWTGEGKSACNTASPAVQSAHNTMMYIIVFGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------ACT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATTGTCTTC---------------------------------------------------------------GGATGG---------GCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--T-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIVF---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916091 [IV-Gamma5-SAR86c] clone_BH01-10_EU916091 gi|229359062|gb|EU916091| Uncultured bacterium clone BH01-10 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone BH01-10 putative proteorhodopsin gene, partial cds. EU916091 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAAAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCCTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCGTTTTCGGTTGGGCG LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMKGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSPVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIVFGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAAAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCCTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCGTTTTC---------------------------------------------------------------GGTTGG---------GCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMKGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSPVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIVF---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916098 [IV-Gamma5-SAR86c] clone_BH23-9_EU916098 gi|229359076|gb|EU916098| Uncultured bacterium clone BH23-9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone BH23-9 putative proteorhodopsin gene, partial cds. EU916098 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTACTGCTTTCTGGCATTACATGTACGTGAAAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTATTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCGTTGTCGGTTGGGCG LASTVFFFVERDRVSAKWKTSLTVSGLVTGTAFWHYMYVKGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGYLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIVVGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTACTGCTTTCTGGCATTACATGTACGTGAAAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTATTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCGTTGTC---------------------------------------------------------------GGTTGG---------GCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGTAFWHYMYVKGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGYLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIVV---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916036 [IV-Gamma5-SAR86c] clone_M7-17_EU916036 gi|229358953|gb|EU916036| Uncultured bacterium clone M7-17 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone M7-17 putative proteorhodopsin gene, partial cds. EU916036 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAGTGATGTATATTATCGTC LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTVMYIIV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAGTG---ATGTATATTATCGTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TV-MYIIV--------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916033 [IV-Gamma5-SAR86c] clone_UM7-17_EU916033 gi|229358947|gb|EU916033| Uncultured bacterium clone UM7-17 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone UM7-17 putative proteorhodopsin gene, partial cds. EU916033 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAGTGATGTATATTATCGTC LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTVMYIIV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAGTG---ATGTATATTATCGTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TV-MYIIV--------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916095 [IV-Gamma5-SAR86c] clone_BH21-23_EU916095 gi|229359070|gb|EU916095| Uncultured bacterium clone BH21-23 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone BH21-23 putative proteorhodopsin gene, partial cds. EU916095 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACACCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAAAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTGTTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCGTCGTCGGTTGGGCT LASTVFFFVERDRVSAKWKTPLTVSGLVTGIAFWHYMYMKGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIVVGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACACCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAAAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTG------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCGTCGTC---------------------------------------------------------------GGTTGG---------GCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTPLTVSGLVTGIAFWHYMYMKGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIVV---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916101 [IV-Gamma5-SAR86c] clone_BH23-16_EU916101 gi|229359082|gb|EU916101| Uncultured bacterium clone BH23-16 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone BH23-16 putative proteorhodopsin gene, partial cds. EU916101 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCGTCGGTTGGGCTATA LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIIVGWAI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCGTC---------------------------------------------------------------GGTTGG---------GCTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIV---------------------GW---AI---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916090 [IV-Gamma5-SAR86c] clone_BH01-9_EU916090 gi|229359060|gb|EU916090| Uncultured bacterium clone BH01-9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone BH01-9 putative proteorhodopsin gene, partial cds. EU916090 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATTTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATTATATTAGGATGGGCT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKFACNTASPAVQSAHNTMMYIIILGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATTTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATTATATTA---------------------------------------------------------------GGATGG---------GCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKFACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIL---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916047 [IV-Gamma5-SAR86c] clone_UM7-33_EU916047 gi|229358975|gb|EU916047| Uncultured bacterium clone UM7-33 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone UM7-33 putative proteorhodopsin gene, partial cds. EU916047 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATTATTTTCGGATGGGCT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIIFGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATTATTTTC---------------------------------------------------------------GGATGG---------GCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916008 [IV-Gamma5-SAR86c] clone_4S17-1_EU916008 gi|229358897|gb|EU916008| Uncultured bacterium clone 4S17-1 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 4S17-1 putative proteorhodopsin gene, partial cds. EU916008 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGGATTATGGGCTGGAGAAGGAAAATCTGCATGCAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYGLWAGEGKSACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGGATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGCAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYGL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916172 [IV-Gamma5-SAR86c] clone_XC-7_EU916172 gi|229359218|gb|EU916172| Uncultured bacterium clone XC-7 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone XC-7 putative proteorhodopsin gene, partial cds. EU916172 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGCAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGCAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916007 [IV-Gamma5-SAR86c] clone_4S17-32_EU916007 gi|229358895|gb|EU916007| Uncultured bacterium clone 4S17-32 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 4S17-32 putative proteorhodopsin gene, partial cds. EU916007 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACCGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTCGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACCGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTCGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916157 [IV-Gamma5-SAR86c] clone_XC-14_EU916157 gi|229359188|gb|EU916157| Uncultured bacterium clone XC-14 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone XC-14 putative proteorhodopsin gene, partial cds. EU916157 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAGACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAGACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916030 [IV-Gamma5-SAR86c] clone_4S17-28_EU916030 gi|229358941|gb|EU916030| Uncultured bacterium clone 4S17-28 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 4S17-28 putative proteorhodopsin gene, partial cds. EU916030 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTATATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGACTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTIFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIIFGWATY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTATATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGACTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTIFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---ATY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916012 [IV-Gamma5-SAR86c] clone_4S17-5_EU916012 gi|229358905|gb|EU916012| Uncultured bacterium clone 4S17-5 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 4S17-5 putative proteorhodopsin gene, partial cds. EU916012 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGGTTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAACTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGGSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSTHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGGTTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---ACT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GGSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-T-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916169 [IV-Gamma5-SAR86c] clone_XC-2_EU916169 gi|229359212|gb|EU916169| Uncultured bacterium clone XC-2 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone XC-2 putative proteorhodopsin gene, partial cds. EU916169 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAACTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSTHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---ACT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-T-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916011 [IV-Gamma5-SAR86c] clone_4S17-4_EU916011 gi|229358903|gb|EU916011| Uncultured bacterium clone 4S17-4 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 4S17-4 putative proteorhodopsin gene, partial cds. EU916011 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACCGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTGGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACCGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTGGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916010 [IV-Gamma5-SAR86c] clone_4S17-3_EU916010 gi|229358901|gb|EU916010| Uncultured bacterium clone 4S17-3 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 4S17-3 putative proteorhodopsin gene, partial cds. EU916010 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916162 [IV-Gamma5-SAR86c] clone_XC-20_EU916162 gi|229359198|gb|EU916162| Uncultured bacterium clone XC-20 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone XC-20 putative proteorhodopsin gene, partial cds. EU916162 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916168 [IV-Gamma5-SAR86c] clone_XC-29_EU916168 gi|229359210|gb|EU916168| Uncultured bacterium clone XC-29 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone XC-29 putative proteorhodopsin gene, partial cds. EU916168 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916020 [IV-Gamma5-SAR86c] clone_4S17-16_EU916020 gi|229358921|gb|EU916020| Uncultured bacterium clone 4S17-16 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 4S17-16 putative proteorhodopsin gene, partial cds. EU916020 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAGAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGESACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAGAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GESACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU915994 [IV-Gamma5-SAR86c] clone_4S3-6_EU915994 gi|229358869|gb|EU915994| Uncultured bacterium clone 4S3-6 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 4S3-6 putative proteorhodopsin gene, partial cds. EU915994 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTACTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVTLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTACTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVTLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916017 [IV-Gamma5-SAR86c] clone_4S17-11_EU916017 gi|229358915|gb|EU916017| Uncultured bacterium clone 4S17-11 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 4S17-11 putative proteorhodopsin gene, partial cds. EU916017 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916160 [IV-Gamma5-SAR86c] clone_XC-18_EU916160 gi|229359194|gb|EU916160| Uncultured bacterium clone XC-18 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone XC-18 putative proteorhodopsin gene, partial cds. EU916160 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAATAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLIVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAATAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLIVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916028 [IV-Gamma5-SAR86c] clone_4S17-26_EU916028 gi|229358937|gb|EU916028| Uncultured bacterium clone 4S17-26 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 4S17-26 putative proteorhodopsin gene, partial cds. EU916028 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU915998 [IV-Gamma5-SAR86c] clone_4S3-31_EU915998 gi|229358877|gb|EU915998| Uncultured bacterium clone 4S3-31 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 4S3-31 putative proteorhodopsin gene, partial cds. EU915998 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCCGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCCGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916027 [IV-Gamma5-SAR86c] clone_4S17-25_EU916027 gi|229358935|gb|EU916027| Uncultured bacterium clone 4S17-25 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 4S17-25 putative proteorhodopsin gene, partial cds. EU916027 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATACATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAYIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TACATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-YIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916173 [IV-Gamma5-SAR86c] clone_XC-9_EU916173 gi|229359220|gb|EU916173| Uncultured bacterium clone XC-9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone XC-9 putative proteorhodopsin gene, partial cds. EU916173 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCCTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSPVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCCTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSPVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916175 [IV-Gamma5-SAR86c] clone_XC-11_EU916175 gi|229359224|gb|EU916175| Uncultured bacterium clone XC-11 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone XC-11 putative proteorhodopsin gene, partial cds. EU916175 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGTTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMVAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GTTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------VA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916161 [IV-Gamma5-SAR86c] clone_XC-19_EU916161 gi|229359196|gb|EU916161| Uncultured bacterium clone XC-19 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone XC-19 putative proteorhodopsin gene, partial cds. EU916161 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCCCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGTTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMVAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCCCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GTTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------VA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916156 [IV-Gamma5-SAR86c] clone_XC-12_EU916156 gi|229359186|gb|EU916156| Uncultured bacterium clone XC-12 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone XC-12 putative proteorhodopsin gene, partial cds. EU916156 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAGAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGTTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAEWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMVAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---GAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GTTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-EWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------VA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916166 [IV-Gamma5-SAR86c] clone_XC-26_EU916166 gi|229359206|gb|EU916166| Uncultured bacterium clone XC-26 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone XC-26 putative proteorhodopsin gene, partial cds. EU916166 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTACTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGTTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMVAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTACTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GTTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------VA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916165 [IV-Gamma5-SAR86c] clone_XC-25_EU916165 gi|229359204|gb|EU916165| Uncultured bacterium clone XC-25 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone XC-25 putative proteorhodopsin gene, partial cds. EU916165 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTACAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGTTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMVAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------ACA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GTTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---T--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------VA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916164 [IV-Gamma5-SAR86c] clone_XC-24_EU916164 gi|229359202|gb|EU916164| Uncultured bacterium clone XC-24 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone XC-24 putative proteorhodopsin gene, partial cds. EU916164 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGTTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMVAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTT---GCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GTTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLIL-A---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------VA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916170 [IV-Gamma5-SAR86c] clone_XC-3_EU916170 gi|229359214|gb|EU916170| Uncultured bacterium clone XC-3 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone XC-3 putative proteorhodopsin gene, partial cds. EU916170 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTACTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGTAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTACTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGTAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916163 [IV-Gamma5-SAR86c] clone_XC-23_EU916163 gi|229359200|gb|EU916163| Uncultured bacterium clone XC-23 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone XC-23 putative proteorhodopsin gene, partial cds. EU916163 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; K108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTAAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGCTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICKSYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTAAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGCTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICKSYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU915995 [IV-Gamma5-SAR86c] clone_4S3-22_EU915995 gi|229358871|gb|EU915995| Uncultured bacterium clone 4S3-22 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 4S3-22 putative proteorhodopsin gene, partial cds. EU915995 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAGATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGRSACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAGATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GRSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916174 [IV-Gamma5-SAR86c] clone_XC-10_EU916174 gi|229359222|gb|EU916174| Uncultured bacterium clone XC-10 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone XC-10 putative proteorhodopsin gene, partial cds. EU916174 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCCCCAACTGTATTTAAATACATTGATTGGTTACTAACAGTTCCTCTATTAATGTGTGAATCCTACTTAATTCTTGCTGCGGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGATGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACGTGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCGGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFKYIDWLLTVPLLMCESYLILAAANVAGSLFKKLLVGSLVMLVFGYMDEAGIMAAWPAFIIGCLAWVYVIYELWAGEGKSACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCCCCAACTGTATTTAAATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATGTGTGAATCCTACTTAATTCTTGCTGCG---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGATGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACGTGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCG---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFKYIDW--------LLTVPLLMCESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMDE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYVIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916167 [IV-Gamma5-SAR86c] clone_XC-28_EU916167 gi|229359208|gb|EU916167| Uncultured bacterium clone XC-28 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone XC-28 putative proteorhodopsin gene, partial cds. EU916167 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATACAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGATAGGGGTATGGATTGGTGATTCTCCAACTGTATTTAAATACATTGATTGGTTACTAACATTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTACCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATTTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDTVSAKWKTSLTVSGLVTGIAFWHYMYMIGVWIGDSPTVFKYIDWLLTFPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLPWVYMIYELWAGEGKFACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATACAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGATAGGGGTATGGATT---------------------------------------------------------GGTGATTCTCCAACTGTATTTAAATACATTGATTGG------------------------TTACTAACATTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTACCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATTTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDTVSA-KWKTSLTVSGLVTGIAFWHYMYMIGVWI-------------------GDSPTVFKYIDW--------LLTFPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLPWVYMIYEL-----W--A-GE-GKFACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916025 [IV-Gamma5-SAR86c] clone_4S17-23_EU916025 gi|229358931|gb|EU916025| Uncultured bacterium clone 4S17-23 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 4S17-23 putative proteorhodopsin gene, partial cds. EU916025 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916019 [IV-Gamma5-SAR86c] clone_4S17-14_EU916019 gi|229358919|gb|EU916019| Uncultured bacterium clone 4S17-14 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 4S17-14 putative proteorhodopsin gene, partial cds. EU916019 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTACTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILTAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTACTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILTA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916158 [IV-Gamma5-SAR86c] clone_XC-15_EU916158 gi|229359190|gb|EU916158| Uncultured bacterium clone XC-15 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone XC-15 putative proteorhodopsin gene, partial cds. EU916158 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCACGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGITAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ACG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------T----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916022 [IV-Gamma5-SAR86c] clone_4S17-20_EU916022 gi|229358925|gb|EU916022| Uncultured bacterium clone 4S17-20 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 4S17-20 putative proteorhodopsin gene, partial cds. EU916022 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCGAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTCGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCGAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTC---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU915993 [IV-Gamma5-SAR86c] clone_4S3-5_EU915993 gi|229358867|gb|EU915993| Uncultured bacterium clone 4S3-5 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 4S3-5 putative proteorhodopsin gene, partial cds. EU915993 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAGAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAGAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU915996 [IV-Gamma5-SAR86c] clone_4S3-23_EU915996 gi|229358873|gb|EU915996| Uncultured bacterium clone 4S3-23 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 4S3-23 putative proteorhodopsin gene, partial cds. EU915996 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916016 [IV-Gamma5-SAR86c] clone_4S17-9_EU916016 gi|229358913|gb|EU916016| Uncultured bacterium clone 4S17-9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 4S17-9 putative proteorhodopsin gene, partial cds. EU916016 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916021 [IV-Gamma5-SAR86c] clone_4S17-19_EU916021 gi|229358923|gb|EU916021| Uncultured bacterium clone 4S17-19 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 4S17-19 putative proteorhodopsin gene, partial cds. EU916021 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATAGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYIGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATAGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYIGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916159 [IV-Gamma5-SAR86c] clone_XC-17_EU916159 gi|229359192|gb|EU916159| Uncultured bacterium clone XC-17 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone XC-17 putative proteorhodopsin gene, partial cds. EU916159 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916024 [IV-Gamma5-SAR86c] clone_4S17-22_EU916024 gi|229358929|gb|EU916024| Uncultured bacterium clone 4S17-22 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 4S17-22 putative proteorhodopsin gene, partial cds. EU916024 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916031 [IV-Gamma5-SAR86c] clone_4S17-30_EU916031 gi|229358943|gb|EU916031| Uncultured bacterium clone 4S17-30 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 4S17-30 putative proteorhodopsin gene, partial cds. EU916031 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGGGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGGGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916171 [IV-Gamma5-SAR86c] clone_XC-4_EU916171 gi|229359216|gb|EU916171| Uncultured bacterium clone XC-4 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone XC-4 putative proteorhodopsin gene, partial cds. EU916171 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916023 [IV-Gamma5-SAR86c] clone_4S17-21_EU916023 gi|229358927|gb|EU916023| Uncultured bacterium clone 4S17-21 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 4S17-21 putative proteorhodopsin gene, partial cds. EU916023 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916009 [IV-Gamma5-SAR86c] clone_4S17-2_EU916009 gi|229358899|gb|EU916009| Uncultured bacterium clone 4S17-2 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 4S17-2 putative proteorhodopsin gene, partial cds. EU916009 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATAATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCGTGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYIIYELWAGEGKSACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATAATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCGTGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYIIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU915991 [IV-Gamma5-SAR86c] clone_4S3223_EU915991 gi|229358863|gb|EU915991| Uncultured bacterium clone 4S3223 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 4S3223 putative proteorhodopsin gene, partial cds. EU915991 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916029 [IV-Gamma5-SAR86c] clone_4S17-27_EU916029 gi|229358939|gb|EU916029| Uncultured bacterium clone 4S17-27 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 4S17-27 putative proteorhodopsin gene, partial cds. EU916029 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGACTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGACTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU915992 [IV-Gamma5-SAR86c] clone_4S3030_EU915992 gi|229358865|gb|EU915992| Uncultured bacterium clone 4S3030 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 4S3030 putative proteorhodopsin gene, partial cds. EU915992 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATG LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM--------------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU915997 [IV-Gamma5-SAR86c] clone_4S3-30_EU915997 gi|229358875|gb|EU915997| Uncultured bacterium clone 4S3-30 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 4S3-30 putative proteorhodopsin gene, partial cds. EU915997 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATG LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM--------------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916013 [IV-Gamma5-SAR86c] clone_4S17-6_EU916013 gi|229358907|gb|EU916013| Uncultured bacterium clone 4S17-6 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 4S17-6 putative proteorhodopsin gene, partial cds. EU916013 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATATACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATTATTATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYIYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATATACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATTATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYIYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916018 [IV-Gamma5-SAR86c] clone_4S17-13_EU916018 gi|229358917|gb|EU916018| Uncultured bacterium clone 4S17-13 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 4S17-13 putative proteorhodopsin gene, partial cds. EU916018 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGATTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCGATCAGCTTACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRDSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVRSAYNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGATTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CGA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRDSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-R-S-A-Y-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_JN648723 [IV-Gamma5-SAR86c] 14_A2_MIX1_M13F_2010_env_samples_JN648723 gi|356818552|gb|JN648723| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648723 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na CTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAACTAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATTATCATCTTTGGG LTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFG ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA---ACTAATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------G---------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU915979 [IV-Gamma5-SAR86c] clone_H10-15_EU915979 gi|229358839|gb|EU915979| Uncultured bacterium clone H10-15 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone H10-15 putative proteorhodopsin gene, partial cds. EU915979 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCTAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTATATGAGAGGAGTATGGATTGGTGATTCACCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGGTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATTATGAACGCTTGGGGTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTATGGGCTGGAGAAGGAAAATCTGCATGTAACACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTACATTATCGTTGTTGGATGGGCAATA LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLGGSLVMLVFGYMGEAGIMNAWGAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIVVGWAI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCT---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTATATGAGAGGAGTATGGATT---------------------------------------------------------GGTGATTCACCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGGTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------AACGCT------------------TGGGGTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAC------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTACATTATCGTTGTT---------------------------------------------------------------GGATGG---------GCAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLGGSLVMLVFGYMGE---A------G--I-----------M----------------------NA------WGA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIVV---------------------GW---AI---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU915989 [IV-Gamma5-SAR86c] clone_H8-2_EU915989 gi|229358859|gb|EU915989| Uncultured bacterium clone H8-2 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone H8-2 putative proteorhodopsin gene, partial cds. EU915989 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCTAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTATATGAGAGGAGTATGGATTGGTGATTCACCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGGTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATTATGAACGCTTGGGGTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTATGGGCTGGAGAAGGAAAATCTGCATGTAACACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTACATTATCGTTTTTGGATGGGCA LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLGGSLVMLVFGYMGEAGIMNAWGAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIVFGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCT---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTATATGAGAGGAGTATGGATT---------------------------------------------------------GGTGATTCACCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGGTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------AACGCT------------------TGGGGTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAC------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTACATTATCGTTTTT---------------------------------------------------------------GGATGG---------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLGGSLVMLVFGYMGE---A------G--I-----------M----------------------NA------WGA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIVF---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU915969 [IV-Gamma5-SAR86c] clone_H8-31_EU915969 gi|229358819|gb|EU915969| Uncultured bacterium clone H8-31 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone H8-31 putative proteorhodopsin gene, partial cds. EU915969 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCTAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTATATGAGAGGAGTATGGATTGGTGATTCACCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGGTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATTATGAACGCTTGGGGTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTATGGGCTGGAGAAGGAAAATCTGCATGTAACAGTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTACATTATCGTTGTAGGATGGGCG LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLGGSLVMLVFGYMGEAGIMNAWGAFIIGCLAWVYMIYELWAGEGKSACNSASPAVQSAYNTMMYIIVVGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCT---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTATATGAGAGGAGTATGGATT---------------------------------------------------------GGTGATTCACCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGGTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------AACGCT------------------TGGGGTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAC------AGT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTACATTATCGTTGTA---------------------------------------------------------------GGATGG---------GCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLGGSLVMLVFGYMGE---A------G--I-----------M----------------------NA------WGA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--S-ASPAV-Q-S-A-Y-N-TM-MYIIVV---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU915778 [IV-Gamma5-SAR86c] PF97522_env_samples_EU915778 gi|229358438|gb|EU915778| Uncultured microorganism clone PF97522 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF97522 putative proteorhodopsin gene, partial cds EU915778 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na GGTGACCTTGATGTAAGTGATACCACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTCTACTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCTAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTATATGAGAGGAGTATGGATTGAAACTGGTGATTCACCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAACTAATGTTGCTGGATCATTATTTAAGAAATTACTAGGTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATTATGAACGCTTGGGGTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTATGGGCTGGAGAAGGAAAATCTGCATGTAACACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTACATTATCGTTGTCGGTTGGGCG GDLDVSDTTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLGGSLVMLVFGYMGEAGIMNAWGAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIVVGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGACCTTGATGTAAGTGATACCACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTCTACTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCT---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTATATGAGAGGAGTATGGATT------------------------------GAA---------------------ACTGGTGATTCACCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA---ACTAATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGGTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------AACGCT------------------TGGGGTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAC------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTACATTATCGTTGTC---------------------------------------------------------------GGTTGG---------GCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------GDLDVSDTTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLGGSLVMLVFGYMGE---A------G--I-----------M----------------------NA------WGA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIVV---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU915978 [IV-Gamma5-SAR86c] clone_H10-14_EU915978 gi|229358837|gb|EU915978| Uncultured bacterium clone H10-14 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone H10-14 putative proteorhodopsin gene, partial cds. EU915978 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCTAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTATATGAGAGGAGTATGGATTGGTGATTCACCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGGTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATTATGAACGCTTGGGGTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTATGGGCTGGAGAAGGAAAATCTGCATGTAACACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTACATTATCGTTGTCGGTTGGGCG LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLGGSLVMLVFGYMGEAGIMNAWGAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIVVGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCT---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTATATGAGAGGAGTATGGATT---------------------------------------------------------GGTGATTCACCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGGTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------AACGCT------------------TGGGGTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAC------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTACATTATCGTTGTC---------------------------------------------------------------GGTTGG---------GCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLGGSLVMLVFGYMGE---A------G--I-----------M----------------------NA------WGA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIVV---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU915966 [IV-Gamma5-SAR86c] clone_H8-17_EU915966 gi|229358813|gb|EU915966| Uncultured bacterium clone H8-17 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone H8-17 putative proteorhodopsin gene, partial cds. EU915966 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCTAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTATATGAGAGGAGTATGGATTGGTGATTCACCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGGTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATTATGAACGCTTGGGGTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTATGGGCTGGAGAAGGAAAATCTGCATGTAACACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTACATTATCGTCTTCGGTTGGGCGATA LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLGGSLVMLVFGYMGEAGIMNAWGAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIVFGWAI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCT---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTATATGAGAGGAGTATGGATT---------------------------------------------------------GGTGATTCACCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGGTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------AACGCT------------------TGGGGTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAC------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTACATTATCGTCTTC---------------------------------------------------------------GGTTGG---------GCGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLGGSLVMLVFGYMGE---A------G--I-----------M----------------------NA------WGA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIVF---------------------GW---AI---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU915983 [IV-Gamma5-SAR86c] clone_H10-26_EU915983 gi|229358847|gb|EU915983| Uncultured bacterium clone H10-26 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone H10-26 putative proteorhodopsin gene, partial cds. EU915983 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCTAAATGGAAAACATCACTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTATATGAGAGGAGTATGGATTGGTGATTCACCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGGTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATTATGAACGCTTGGGGTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTATGGGCTGGAGAAGGAAAATCTGCATGTAACACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTACATTATCATATTCGGATGGGCTATA LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLGGSLVMLVFGYMGEAGIMNAWGAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCT---AAATGGAAAACATCACTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTATATGAGAGGAGTATGGATT---------------------------------------------------------GGTGATTCACCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGGTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------AACGCT------------------TGGGGTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAC------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTACATTATCATATTC---------------------------------------------------------------GGATGG---------GCTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLGGSLVMLVFGYMGE---A------G--I-----------M----------------------NA------WGA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AI---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU915982 [IV-Gamma5-SAR86c] clone_H9-1_EU915982 gi|229358845|gb|EU915982| Uncultured bacterium clone H9-1 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone H9-1 putative proteorhodopsin gene, partial cds. EU915982 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCTAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTATATGAGAGGAGTATGGATTGGTGATTCACCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGGTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATTATGAACGCTTGGGGTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTATGGGCTGGAGAAGGAAAATCTGCATGTAACACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTACATTATTATCTTTGGATGGGCTATA LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLGGSLVMLVFGYMGEAGIMNAWGAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCT---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTATATGAGAGGAGTATGGATT---------------------------------------------------------GGTGATTCACCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGGTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------AACGCT------------------TGGGGTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAC------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTACATTATTATCTTT---------------------------------------------------------------GGATGG---------GCTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLGGSLVMLVFGYMGE---A------G--I-----------M----------------------NA------WGA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AI---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU915974 [IV-Gamma5-SAR86c] clone_H9-26_EU915974 gi|229358829|gb|EU915974| Uncultured bacterium clone H9-26 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone H9-26 putative proteorhodopsin gene, partial cds. EU915974 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCTAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTATATGAGAGGAGTATGGATTGGTGATTCACCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGGTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATTATGAACGCTTGGGGTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTATGGGCTGGAGAAGGAAAATCTGCATGTAACACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTACATTATCATCGTAGGATGGGCT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLGGSLVMLVFGYMGEAGIMNAWGAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIVGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCT---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTATATGAGAGGAGTATGGATT---------------------------------------------------------GGTGATTCACCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGGTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------AACGCT------------------TGGGGTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAC------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTACATTATCATCGTA---------------------------------------------------------------GGATGG---------GCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLGGSLVMLVFGYMGE---A------G--I-----------M----------------------NA------WGA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIV---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU915970 [IV-Gamma5-SAR86c] clone_H9-5_EU915970 gi|229358821|gb|EU915970| Uncultured bacterium clone H9-5 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone H9-5 putative proteorhodopsin gene, partial cds. EU915970 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCTAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTATATGAGAGGAGTATGGATTGGTGATTCACCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGGTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATTATGAACGCTTGGGGTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTATGGGCTGGAGAAGGAAAATCTGCATGTAACACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTACATTATCATAGTCGGTTGGGCT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLGGSLVMLVFGYMGEAGIMNAWGAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIVGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCT---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTATATGAGAGGAGTATGGATT---------------------------------------------------------GGTGATTCACCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGGTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------AACGCT------------------TGGGGTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAC------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTACATTATCATAGTC---------------------------------------------------------------GGTTGG---------GCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLGGSLVMLVFGYMGE---A------G--I-----------M----------------------NA------WGA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIV---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU915984 [IV-Gamma5-SAR86c] clone_H10-2_EU915984 gi|229358849|gb|EU915984| Uncultured bacterium clone H10-2 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone H10-2 putative proteorhodopsin gene, partial cds. EU915984 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCTAAATGGGAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTATATGAGAGGAGTATGGATTGGTGATTCACCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGGTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATTATGAACGCTTGGGGTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTATGGGCTGGAGAAGGAAAATCTGCATGTAACACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTACATTATCGTCGTAGGTTGGGCTATA LASTVFFFVERDRVSAKWETSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLGGSLVMLVFGYMGEAGIMNAWGAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIVVGWAI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCT---AAATGGGAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTATATGAGAGGAGTATGGATT---------------------------------------------------------GGTGATTCACCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGGTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------AACGCT------------------TGGGGTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAC------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTACATTATCGTCGTA---------------------------------------------------------------GGTTGG---------GCTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWETSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLGGSLVMLVFGYMGE---A------G--I-----------M----------------------NA------WGA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIVV---------------------GW---AI---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU915987 [IV-Gamma5-SAR86c] clone_H10-30_EU915987 gi|229358855|gb|EU915987| Uncultured bacterium clone H10-30 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone H10-30 putative proteorhodopsin gene, partial cds. EU915987 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCTAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTATATGAGAGGAGTATGGATTGGTGATTCACCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGGTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATTATGAACGCTTGGGGTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTATGGGCTGGAGAAGGAAAATCTGCATGTAACACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTACATTATCGTATTCGGTTGGGCT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLGGSLVMLVFGYMGEAGIMNAWGAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIVFGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCT---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTATATGAGAGGAGTATGGATT---------------------------------------------------------GGTGATTCACCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGGTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------AACGCT------------------TGGGGTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAC------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTACATTATCGTATTC---------------------------------------------------------------GGTTGG---------GCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLGGSLVMLVFGYMGE---A------G--I-----------M----------------------NA------WGA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIVF---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU915971 [IV-Gamma5-SAR86c] clone_H9-13_EU915971 gi|229358823|gb|EU915971| Uncultured bacterium clone H9-13 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone H9-13 putative proteorhodopsin gene, partial cds. EU915971 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCTAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTATATGAGAGGAGTATGGATTGGTGATTCACCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGGTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATTATGAACGCTTGGGGTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTATGGGCTGGAGAAGGAAAATCTGCATGTAACACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTACATTATCGTATTAGGTTGGGCAATA LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLGGSLVMLVFGYMGEAGIMNAWGAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIVLGWAI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCT---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTATATGAGAGGAGTATGGATT---------------------------------------------------------GGTGATTCACCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGGTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------AACGCT------------------TGGGGTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAC------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTACATTATCGTATTA---------------------------------------------------------------GGTTGG---------GCAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLGGSLVMLVFGYMGE---A------G--I-----------M----------------------NA------WGA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIVL---------------------GW---AI---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU915973 [IV-Gamma5-SAR86c] clone_H9-18_EU915973 gi|229358827|gb|EU915973| Uncultured bacterium clone H9-18 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone H9-18 putative proteorhodopsin gene, partial cds. EU915973 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCTAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTATATGAGAGGAGTATGGATTGGTGATTCACCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGGTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATTATGAACGCTTGGGGTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTATGGGCTGGAGAAGGAAAATCTGCATGTAACACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTACATTATTATATTAGGTTGGGCAATA LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLGGSLVMLVFGYMGEAGIMNAWGAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIILGWAI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCT---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTATATGAGAGGAGTATGGATT---------------------------------------------------------GGTGATTCACCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGGTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------AACGCT------------------TGGGGTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAC------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTACATTATTATATTA---------------------------------------------------------------GGTTGG---------GCAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLGGSLVMLVFGYMGE---A------G--I-----------M----------------------NA------WGA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIL---------------------GW---AI---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU915968 [IV-Gamma5-SAR86c] clone_H8-30_EU915968 gi|229358817|gb|EU915968| Uncultured bacterium clone H8-30 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone H8-30 putative proteorhodopsin gene, partial cds. EU915968 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCTAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTATATGAGAGGAGTATGGATTGGTGATTCACCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAACTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGGTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATTATGAACGCTTGGGGTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTATGGGCTGGAGAAGGAAAATCTGCATGTAACACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTACATTATCATAGTAGGTTGGGCG LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICEFYLTLAAANVAGSLFKKLLGGSLVMLVFGYMGEAGIMNAWGAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIVGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCT---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTATATGAGAGGAGTATGGATT---------------------------------------------------------GGTGATTCACCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAACTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGGTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------AACGCT------------------TGGGGTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAC------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTACATTATCATAGTA---------------------------------------------------------------GGTTGG---------GCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICEFYLTLAA---A--NVAG-SL------------FKK-LLGGSLVMLVFGYMGE---A------G--I-----------M----------------------NA------WGA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIV---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_AF349976 [IV-Gamma5-SAR86c] clone_BAC_EBAC40E8_AF349976 gi|13560718|gb|AF349976| Uncultured bacterium clone BAC EBAC40E8 proteorhodopsin gene, partial cds. Uncultured bacterium clone BAC EBAC40E8 proteorhodopsin gene, partial cds. AF349976 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 11-MAY-2004 #na #na Pacific Ocean marine 36.7 -122.4 Proteorhodopsin phototrophy in the ocean Beja,O., Spudich,E.N., Spudich,J.L., Leclerc,M. and DeLong,E.F. Nature 411 (6839), 786-789 (2001) 11459054 #na ACCATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCAGGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTCTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCGGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGAGACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTGATATGTGAATTCTACTTAATTCTTGCTGCTGCAACAAATGTTGCTGCTGGCCTGTTTAAGAAATTATTGGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAGGCAGGAATTATGAACGCTTGGGGTGCATTCGTTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTATGGGCTGGAGAAGGCAAGGCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATAATCATCTTTGGTTGGGCAATTTATCCTGTAGGTTATTTCACAGGTTACCTAATGGGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATGACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCTAAGG TMGKLLLILGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAAGLFKKLLVGSLVMLVFGYMGEAGIMNAWGAFVIGCLAWVYMIYELWAGEGKAACNTASPAVQSAYNTMMYIIIFGWAIYPVGYFTGYLMGDGGSALNLNLIYDLADFVNKILFGLIIWNVAVKESSNAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCA------GGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTCTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCGGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT------------------------------GAG---------------------ACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTGATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA---ACAAATGTTGCTGCT---GGCCTG------------------------------------TTTAAGAAA---TTATTGGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAG---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------AACGCT------------------TGGGGTGCA---TTCGTTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTA---------------TGG------GCT---GGAGAA---GGCAAGGCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATAATCATCTTT---------------------------------------------------------------GGTTGG---------GCAATTTATCCTGTAGGTTATTTCACAGGTTACCTAATG------------------------------------GGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATGACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCTAAG------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------TMGKLLLILGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAA-GL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------NA------WGA-FVIGCLAWVYMIYEL-----W--A-GE-GKAACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYDLADFVNKILFGLIIWNVAVKE-SSNAK------------------------------------ [IV-Gamma5-SAR86c]_AF349978 [IV-Gamma5-SAR86c] clone_HOT_0m1_AF349978 gi|13560722|gb|AF349978| Uncultured bacterium clone HOT 0m1 proteorhodopsin gene, partial cds. Uncultured bacterium clone HOT 0m1 proteorhodopsin gene, partial cds. AF349978 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 11-MAY-2004 #na #na Pacific Ocean marine 22.4 -158 Proteorhodopsin phototrophy in the ocean Beja,O., Spudich,E.N., Spudich,J.L., Leclerc,M. and DeLong,E.F. Nature 411 (6839), 786-789 (2001) 11459054 #na ACCATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCAGGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTCTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCGGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGAGACCGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTGATATGTGAATTCTACTTAATTCTTGCTGCTGCAACAAATGTTGCTGCTGGCCTGTTTAAGAAATTATTGGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAGGCAGGAATTATGAACGCTTGGGGTGCATTCGTTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTATGGGCTGGAGAAGGCAAGGCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATAATCATCTTTGGTTGGGCAATTTATCCTGTAGGTTATTTCACAGGTTACCTAATGGGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCT TMGKLLLILGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAAGLFKKLLVGSLVMLVFGYMGEAGIMNAWGAFVIGCLAWVYMIYELWAGEGKAACNTASPAVQSAYNTMMYIIIFGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCA------GGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTCTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCGGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT------------------------------GAG---------------------ACCGGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTGATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA---ACAAATGTTGCTGCT---GGCCTG------------------------------------TTTAAGAAA---TTATTGGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAG---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------AACGCT------------------TGGGGTGCA---TTCGTTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTA---------------TGG------GCT---GGAGAA---GGCAAGGCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATAATCATCTTT---------------------------------------------------------------GGTTGG---------GCAATTTATCCTGTAGGTTATTTCACAGGTTACCTAATG------------------------------------GGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------TMGKLLLILGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAA-GL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------NA------WGA-FVIGCLAWVYMIYEL-----W--A-GE-GKAACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_AF349989 [IV-Gamma5-SAR86c] clone_MB_40m5_AF349989 gi|13560744|gb|AF349989| Uncultured bacterium clone MB 40m5 proteorhodopsin gene, partial cds. Uncultured bacterium clone MB 40m5 proteorhodopsin gene, partial cds. AF349989 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 11-MAY-2004 #na #na Pacific Ocean marine 36.7 -122.4 Proteorhodopsin phototrophy in the ocean Beja,O., Spudich,E.N., Spudich,J.L., Leclerc,M. and DeLong,E.F. Nature 411 (6839), 786-789 (2001) 11459054 #na ACCATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCAGGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTCTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCGGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGAGACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTGATATGTGAATTCTACTTAATTCTTGCTGCTGCAACAAATGTTGCTGCTGGCCTGTTTAAGAAATTATTGGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAGGCAGGAATTATGAACGCTTGGGGTGCATTCGTTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTATGGGCTGGAGAAGGCAAGGCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATAATCATCTTTGGTTGGGCAATTTATCCTGTAGGTTATTTCACAGGTTACCTAATGGGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGAATCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTA TMGKLLLILGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAAGLFKKLLVGSLVMLVFGYMGEAGIMNAWGAFVIGCLAWVYMIYELWAGEGKAACNTASPAVQSAYNTMMYIIIFGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKNLFGLIIWNVAVKESS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCA------GGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTCTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCGGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT------------------------------GAG---------------------ACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTGATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA---ACAAATGTTGCTGCT---GGCCTG------------------------------------TTTAAGAAA---TTATTGGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAG---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------AACGCT------------------TGGGGTGCA---TTCGTTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTA---------------TGG------GCT---GGAGAA---GGCAAGGCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATAATCATCTTT---------------------------------------------------------------GGTTGG---------GCAATTTATCCTGTAGGTTATTTCACAGGTTACCTAATG------------------------------------GGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGAATCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCT--------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------TMGKLLLILGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAA-GL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------NA------WGA-FVIGCLAWVYMIYEL-----W--A-GE-GKAACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKNLFGLIIWNVAVKE-SS--------------------------------------- [IV-Gamma5-SAR86c]_AF349985 [IV-Gamma5-SAR86c] clone_MB_20m2_AF349985 gi|13560736|gb|AF349985| Uncultured bacterium clone MB 20m2 proteorhodopsin gene, partial cds. Uncultured bacterium clone MB 20m2 proteorhodopsin gene, partial cds. AF349985 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 11-MAY-2004 #na #na Pacific Ocean marine 36.7 -122.4 Proteorhodopsin phototrophy in the ocean Beja,O., Spudich,E.N., Spudich,J.L., Leclerc,M. and DeLong,E.F. Nature 411 (6839), 786-789 (2001) 11459054 #na ACCATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCAGGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGAAACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAACTAATGTTGCTGCTGGCCTGTTTAAGAAATTATTGGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAGGCAGGAATTATGAACGCTTGGGGTGCATTCGTTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTATGGGCTGGAGAAGGCAAGGCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATAATCATCTTTGGTTGGGCAATTTATCCTGTAGGTTATTTCACAGGTTACCTAATGGGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCT TMGKLLLILGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAAGLFKKLLVGSLVMLVFGYMGEAGIMNAWGAFVIGCLAWVYMIYELWAGEGKAACNTASPAVQSAYNTMMYIIIFGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCA------GGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT------------------------------GAA---------------------ACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA---ACTAATGTTGCTGCT---GGCCTG------------------------------------TTTAAGAAA---TTATTGGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAG---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------AACGCT------------------TGGGGTGCA---TTCGTTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTA---------------TGG------GCT---GGAGAA---GGCAAGGCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATAATCATCTTT---------------------------------------------------------------GGTTGG---------GCAATTTATCCTGTAGGTTATTTCACAGGTTACCTAATG------------------------------------GGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------TMGKLLLILGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAA-GL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------NA------WGA-FVIGCLAWVYMIYEL-----W--A-GE-GKAACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_AF349983 [IV-Gamma5-SAR86c] clone_MB_0m1_AF349983 gi|13560732|gb|AF349983| Uncultured bacterium clone MB 0m1 proteorhodopsin gene, partial cds. Uncultured bacterium clone MB 0m1 proteorhodopsin gene, partial cds. AF349983 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 11-MAY-2004 #na #na Pacific Ocean marine 36.7 -122.4 Proteorhodopsin phototrophy in the ocean Beja,O., Spudich,E.N., Spudich,J.L., Leclerc,M. and DeLong,E.F. Nature 411 (6839), 786-789 (2001) 11459054 #na ACCATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCAGGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTCTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGAGACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTGATATGTGAATTCTACTTAATTCTTGCTGCTGCAACAAATGTTGCTGCTGGCCTGTTTAAGAAATTATTGGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAGGCAGGAATTATGAACGCTTGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTATATGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTTCGGTTCAATCAGCTTACAACACAATGATGGCTATCATAGTCTTCGGTTGGGCAATTTATCCTGTAGGTTATTTCACAGGTTACCTAATGGGTGACGGTGGATCAGCTCTTAACTTAAACCTTATTTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCT TMGKLLLILGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAAGLFKKLLVGSLVMLVFGYMGEAGIMNAWPAFIIGCLAWVYMIYELYAGEGKSACNTASPSVQSAYNTMMAIIVFGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCA------GGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTCTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT------------------------------GAG---------------------ACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTGATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA---ACAAATGTTGCTGCT---GGCCTG------------------------------------TTTAAGAAA---TTATTGGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAG---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------AACGCT------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTA---------------TAT------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTTCGGTT---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGGCTATCATAGTCTTC---------------------------------------------------------------GGTTGG---------GCAATTTATCCTGTAGGTTATTTCACAGGTTACCTAATG------------------------------------GGTGACGGTGGATCAGCTCTTAACTTAAACCTTATTTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------TMGKLLLILGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAA-GL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------NA------WPA-FIIGCLAWVYMIYEL-----Y--A-GE-GKSACN--T-ASPSV-Q-S-A-Y-N-TM-MAIIVF---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_AF349984 [IV-Gamma5-SAR86c] clone_MB_0m2_AF349984 gi|13560734|gb|AF349984| Uncultured bacterium clone MB 0m2 proteorhodopsin gene, partial cds. Uncultured bacterium clone MB 0m2 proteorhodopsin gene, partial cds. AF349984 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 11-MAY-2004 #na #na Pacific Ocean marine 36.7 -122.4 Proteorhodopsin phototrophy in the ocean Beja,O., Spudich,E.N., Spudich,J.L., Leclerc,M. and DeLong,E.F. Nature 411 (6839), 786-789 (2001) 11459054 #na ACCATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCAGGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGAAACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCTACTAATGTTGCTGCTGGCCTGTTTAAGAAATTATTGGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATTATGAACGCTTGGGGTGCATTCGTTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAGCTTTGGCTTGGAGAAGGAAAAGCTGCGTGTAATACAGCAAGTCCTGCTGTTCAGTCAGCTTACAACACAATGATGATGATCATCATCTTTGGTTGGGCAATTTATCCTGTAGGTTATTTCACAGGTTACCTAATGGGTGACGGTGGATCAGCACTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCT TMGKLLLILGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAAGLFKKLLVGSLVMLVFGYMGEAGIMNAWGAFVIGCLAWVYMIYELWLGEGKAACNTASPAVQSAYNTMMMIIIFGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCA------GGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT------------------------------GAA---------------------ACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCT---ACTAATGTTGCTGCT---GGCCTG------------------------------------TTTAAGAAA---TTATTGGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------AACGCT------------------TGGGGTGCA---TTCGTTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAGCTT---------------TGG------CTT---GGAGAA---GGAAAAGCTGCGTGTAAT------ACA---GCAAGTCCTGCTGTT---CAG---TCA---GCT---TAC---AAC---ACAATG---ATGATGATCATCATCTTT---------------------------------------------------------------GGTTGG---------GCAATTTATCCTGTAGGTTATTTCACAGGTTACCTAATG------------------------------------GGTGACGGTGGATCAGCACTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------TMGKLLLILGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAA-GL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------NA------WGA-FVIGCLAWVYMIYEL-----W--L-GE-GKAACN--T-ASPAV-Q-S-A-Y-N-TM-MMIIIF---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_FJ862917 [IV-Gamma5-SAR86c] 05_env_samples_FJ862917 gi|226897378|gb|FJ862917| Uncultured bacterium clone 05 putative proteorhodopsin gene, partial cds Uncultured bacterium clone 05 putative proteorhodopsin gene, partial cds FJ862917 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 07-Dec-2009 #na coastal_seawater Atlantic Ocean marine 38.8489 -75.1076 Lightdependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTTGATTGGTTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAACTAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAGGCAGGAATTATGGCAGCTTGGCCCGCATTCATTATTGGATGTTTAGCTTGGGTATACATGATTTATGAACTATGGGCTGGAGAAGGAAAATCTGCTTGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATCATCATCTTTGGCTGGGCCATATACGCTCGA VDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGATTGG------------------------TTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA---ACTAATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAG---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCCGCA---TTCATTATTGGATGTTTAGCTTGGGTATACATGATTTATGAACTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCTTGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCTTT---------------------------------------------------------------GGCTGG---------GCCATATACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_FJ862974 [IV-Gamma5-SAR86c] clone_33_FJ862974 gi|226897348|gb|FJ862974| Uncultured bacterium clone 33 putative proteorhodopsin mRNA, partial cds. Uncultured bacterium clone 33 putative proteorhodopsin mRNA, partial cds. FJ862974 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 07-DEC-2009 #na coastal seawater Atlantic Ocean marine 38.8489 -75.1076 Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na ATTGACTGGTTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAACTAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAGGCAGGAATTATGGCAGCTTGGCCTGCATTCATTATTGGATGTTTAGCTTGGGTATACATGATTTATGAACTATGGGCTGGAGAAGGAAAATCTGCTTGTAATACTGCAAGTCCCGCTGTGCAATCAGCTTACAACACAATGATGTATATCATCATCTTTGGTTGGGCCATCTATGCTCGA IDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGACTGG------------------------TTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA---ACTAATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAG---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATTATTGGATGTTTAGCTTGGGTATACATGATTTATGAACTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCTTGTAAT------ACT---GCAAGTCCCGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCTTT---------------------------------------------------------------GGTTGG---------GCCATCTATGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_1105075157437 [IV-Gamma5-SAR86c] JCVI_ORF_1105075157437_GS004_Coastal_2m jcvi|1105075157437| 1105075157437 JCVI ORF 1105075157437 1105075157437 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 22-AUG-2003 Coastal/2m_depth/S_28.3_psu/GS004/Outside_Halifax/Nova_Scotia/North_American_East_Coast Atlantic Ocean marine 44.137222 -63.644444 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf AGGCTTGGAGGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTCTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGAAACTGGTGACTCACCAACTGTATTTAGATACATTGACTGGTTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAACTAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAGGCAGGAATTATGGCAGCTTGGCCTGCATTCATTATTGGATGTTTAGCTTGGGTATACATGATTTATGAACTATGGGCTGGAGAAGGAAAATCTGCTTGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATCATCATCTTTGGTTGGGCGATTTATCCTGTAGGTTATTTCACAGGTTACCTAATGGGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCT RLGGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGCTTGGA------GGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTCTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT------------------------------GAA---------------------ACTGGTGACTCACCAACTGTATTTAGATACATTGACTGG------------------------TTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA---ACTAATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAG---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATTATTGGATGTTTAGCTTGGGTATACATGATTTATGAACTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCTTGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTATCCTGTAGGTTATTTCACAGGTTACCTAATG------------------------------------GGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------RLG--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_1105100721050 [IV-Gamma5-SAR86c] JCVI_ORF_1105100721050 jcvi|1105100721050| 1105100721050 JCVI ORF 1105100721050 1105100721050 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 22-AUG-2003 Embayment/1m_depth/S_30.2_psu/GS005/Bedford_Basin/Nova_Scotia/North_American_East_Coast Atlantic Ocean marine 44.690277 -63.637222 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf CGTTCTGCGACTGAAGTGAAATCTCTACTGTATTTTTCTTTGTTGAAGAGATACAGTTTCTGCAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGATAGGGGTATGGATTGAAACTGGTGACTCCCCAACTGTATTTAGATACATTGACTGGTTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAACTAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAGGCAGGAATTATGGCAGCTTGTCCTGCATTCATTATTGGATGTTTAGCTTGGGTATACATGATTTATGAACTATGGGCTGGAGAAGGAAAATCTGCTTGTAATACTGCCAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATCATCATCTTTGGTTGGGCGATTTATCCTGTAGGTTATTTCACAGGTTACCTAATGGGTGACGGTGGATCAACTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTCTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCT RSATEVKSLLYFSLLKRYSFCKWKTSLTVSGLVTGIAFWHYMYMIGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAACPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYPVGYFTGYLMGDGGSTLNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTCTGCGACTGAAGTGAAATCTCTACTGTATTTTTCTTTGTTGAAGAGATACAGTTTCTGC---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGATAGGGGTATGGATT------------------------------GAA---------------------ACTGGTGACTCCCCAACTGTATTTAGATACATTGACTGG------------------------TTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA---ACTAATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAG---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGTCCTGCA---TTCATTATTGGATGTTTAGCTTGGGTATACATGATTTATGAACTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCTTGTAAT------ACT---GCCAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTATCCTGTAGGTTATTTCACAGGTTACCTAATG------------------------------------GGTGACGGTGGATCAACTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTCTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------RSATEVKSLLYFSLLKRYSFC-KWKTSLTVSGLVTGIAFWHYMYMIGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------CPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYPVGYFTGYLM------------GDGGSTLNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_AY210918 [IV-Gamma5-SAR86c] Uncultured_bacterium_clone_REDr6a5a14_partial_cds_AY210918 gi|27804298|gb|AY210918| Uncultured bacterium clone REDr6a5a14 proteorhodopsin gene, partial cds Uncultured bacterium clone REDr6a5a14 proteorhodopsin gene, partial cds AY210918 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (E105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 30APR2004 #na collected_on_February_1999_from_a_station_in_the_northern_Red_Sea/near_the_entrance_to_the_Gulf_of_Suez_[27.17_N/34.22_E] Red Sea marine 27.17 34.22 Diversification and spectral tuning in marine proteorhodopsins Man,D., Wang,W., Sabehi,G., Aravind,L., Post,A.F., Massana,R., Spudich,E.N., Spudich,J.L. and Beja,O. EMBO J. 22 (8), 17251731 (2003) 12682005 PCR amplified from plankton DNA extracts ATGGGTAAATTATTACTGATCTTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCAGGTGGTGGTGACCCTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAGAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGAAACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTAGAAATATGTGAATTCTACTTAATTCTTGCTGCTGCAACTAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTATCCTGTAGGTTATTTCACAGGTTACCTGATGGGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTAATTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCT MGKLLLILGSVIALPTFAAGGGDPDASDYTGVSFWLVTAALLASTVFFFVERDRVSAEWKTSLTVSGLVTGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLEICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILIGLIIWNVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAATTATTACTGATCTTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCA------GGTGGTGGTGACCCTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---GAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT------------------------------GAA---------------------ACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTAGAAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA---ACTAATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTATCCTGTAGGTTATTTCACAGGTTACCTGATG------------------------------------GGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTAATTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MGKLLLILGSVIALPTFAA--GGGDPDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-EWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLEICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILIGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_AY250717 [IV-Gamma5-SAR86c] Uncultured_bacterium_clone_REDs3_15_partial_cds_AY250717 gi|29470231|gb|AY250717| Uncultured bacterium clone REDs3 15 proteorhodopsin gene, partial cds Uncultured bacterium clone REDs3 15 proteorhodopsin gene, partial cds AY250717 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (E105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 20-Apr-2004 #na collected_from_a_depth_of_60_m_at_a_station_in_the_northern_Red_Sea_near_the_entrance_to_the_Gulf_of_Suez_[27.17_N/34.22_E]_in_February_1999 Red Sea marine 27.17 34.22 Novel Proteorhodopsin variants from the Mediterranean and Red Seas Sabehi,G., Massana,R., Bielawski,J.P., Rosenberg,M., Delong,E.F. and Beja,O. Environ. Microbiol. 5 (10), 842849 (2003) 14510837 PCR amplified from plankton DNA extracts ATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCAGGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTACCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGAAACTGGTGATTCGCCAGCTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTAGAGATATGTGAATTCTACTTGATTCTTGCTGCTGCAACTAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTATCCTGTAGGTTATTTCACAGGTTACCTGATGGGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCT MGKLLLILGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVPGLVTGIAFWHYMYMRGVWIETGDSPAVFRYIDWLLTVPLEICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCA------GGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTACCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT------------------------------GAA---------------------ACTGGTGATTCGCCAGCTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTAGAGATATGTGAATTCTACTTGATTCTTGCTGCT---------GCA---ACTAATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTATCCTGTAGGTTATTTCACAGGTTACCTGATG------------------------------------GGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MGKLLLILGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVPGLVTGIAFWHYMYMRGVWI----------E-------TGDSPAVFRYIDW--------LLTVPLEICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_AY210913 [IV-Gamma5-SAR86c] Uncultured_bacterium_clone_RED23_partial_cds_AY210913 gi|27804288|gb|AY210913| Uncultured bacterium clone RED23 proteorhodopsin gene, partial cds Uncultured bacterium clone RED23 proteorhodopsin gene, partial cds AY210913 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (A105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 30APR2004 #na collected_on_February_1999_from_a_station_in_the_northern_Red_Sea/near_the_entrance_to_the_Gulf_of_Suez_[27.17_N/34.22_E] Red Sea marine 27.17 34.22 Diversification and spectral tuning in marine proteorhodopsins Man,D., Wang,W., Sabehi,G., Aravind,L., Post,A.F., Massana,R., Spudich,E.N., Spudich,J.L. and Beja,O. EMBO J. 22 (8), 17251731 (2003) 12682005 PCR amplified from plankton DNA extracts ATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCAGGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGAAACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTACCAGTTCCTCTAGCAATATGTGAATTCTACTTAATTCTTGCTGCTGCAACTAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTATCCTGTAGGTTATTTCACAGGTTACCTGATGGGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCT MGKLLLILGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLPVPLAICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCA------GGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT------------------------------GAA---------------------ACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTACCAGTTCCTCTAGCAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA---ACTAATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTATCCTGTAGGTTATTTCACAGGTTACCTGATG------------------------------------GGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MGKLLLILGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLPVPLAICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_AY250716 [IV-Gamma5-SAR86c] Uncultured_bacterium_clone_REDr7_1_15_partial_cds_AY250716 gi|46411190|gb|AY250716| Uncultured bacterium clone REDr7 1 15 proteorhodopsin gene, partial cds Uncultured bacterium clone REDr7 1 15 proteorhodopsin gene, partial cds AY250716 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 20-Apr-2004 #na collected_from_a_depth_of_10_m_at_a_station_in_the_northern_Red_Sea_near_the_entrance_to_the_Gulf_of_Suez_[27.17_N/34.22_E]_in_February_1999 Red Sea marine 27.17 34.22 Novel Proteorhodopsin variants from the Mediterranean and Red Seas Sabehi,G., Massana,R., Bielawski,J.P., Rosenberg,M., Delong,E.F. and Beja,O. Environ. Microbiol. 5 (10), 842849 (2003) 14510837 PCR amplified from plankton DNA extracts ATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCAGGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTACTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTACCTGGTCTTATTACTGATATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGAAACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTACAAATATGTGAATTCTACTTAATTCTTGCTGCTGCAACTAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCGAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTATCCTGTAGGTTATTTCACAGGTTACCTGATGGGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCT MGKLLLILGSVIALPTFAAGGGDLDASDYTGVSFWLVTTALLASTVFFFVERDRVSAKWKTSLTVPGLITDIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLQICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCA------GGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTACTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTACCTGGTCTTATTACTGATATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT------------------------------GAA---------------------ACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTACAAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA---ACTAATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCGAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTATCCTGTAGGTTATTTCACAGGTTACCTGATG------------------------------------GGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MGKLLLILGSVIALPTFAA--GGGDLDASDYTGVSFWLVTTALLASTVFFFVERDRVSA-KWKTSLTVPGLITDIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLQICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_AY598754 [IV-Gamma5-SAR86c] clone_N2_R17_6_AY598754 gi|47078704|gb|AY598754| Uncultured bacterium clone N2 R17 6 proteorhodopsin gene, partial cds. Uncultured bacterium clone N2 R17 6 proteorhodopsin gene, partial cds. AY598754 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 13-oct-04 #na Red Sea water Red Sea marine 27.17 34.22 Characterization of RS29, a blue-green proteorhodopsin variant from the Red Sea Man-Aharonovich,D., Sabehi,G., Sineshchekov,O.A., Spudich,E.N., Spudich,J.L. and Beja,O. Photochem. Photobiol. Sci. 3 (5), 459-462 (2004) 15122363 #na GTGATGTTAGTAAGTGTTATTGCACTTCCTACATTTGCTGCAGGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTACTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTACCTGGTCTTATTACTGATATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGAAACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTACAAATATGTGAATTCTACTTAATTCTTGCTGCTGCAACTAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCGAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTATCCTGTAGGTCATTTCACAGGTTACCTGATGGGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCTA VMLVSVIALPTFAAGGGDLDASDYTGVSFWLVTTALLASTVFFFVERDRVSAKWKTSLTVPGLITDIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLQICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYPVGHFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGATGTTAGTAAGTGTTATTGCACTTCCTACATTTGCTGCA------GGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTACTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTACCTGGTCTTATTACTGATATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT------------------------------GAA---------------------ACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTACAAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA---ACTAATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCGAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTATCCTGTAGGTCATTTCACAGGTTACCTGATG------------------------------------GGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------VMLVSVIALPTFAA--GGGDLDASDYTGVSFWLVTTALLASTVFFFVERDRVSA-KWKTSLTVPGLITDIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLQICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYPVGHFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_AY250715 [IV-Gamma5-SAR86c] Uncultured_bacterium_clone_REDs3_7_partial_cds_AY250715 gi|29470227|gb|AY250715| Uncultured bacterium clone REDs3 7 proteorhodopsin gene, partial cds Uncultured bacterium clone REDs3 7 proteorhodopsin gene, partial cds AY250715 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 20-Apr-2004 #na collected_from_a_depth_of_60_m_at_a_station_in_the_northern_Red_Sea_near_the_entrance_to_the_Gulf_of_Suez_[27.17_N/34.22_E]_in_February_1999 Red Sea marine 27.17 34.22 Novel Proteorhodopsin variants from the Mediterranean and Red Seas Sabehi,G., Massana,R., Bielawski,J.P., Rosenberg,M., Delong,E.F. and Beja,O. Environ. Microbiol. 5 (10), 842849 (2003) 14510837 PCR amplified from plankton DNA extracts ATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCAGGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTACCTGGTCTTATTACTGATATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGAAACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTACAAATATGTGAATTCTACTTAATTCTTGCTGCTGCAACTAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCGAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTATCCTGTAGGTTATTTCACAGGTTACCTGATGGGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAAT MGKLLLILGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVPGLITDIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLQICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSN ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCA------GGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTACCTGGTCTTATTACTGATATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT------------------------------GAA---------------------ACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTACAAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA---ACTAATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCGAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTATCCTGTAGGTTATTTCACAGGTTACCTGATG------------------------------------GGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAAT------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------MGKLLLILGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVPGLITDIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLQICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SSN-------------------------------------- [IV-Gamma5-SAR86c]_AY250714 [IV-Gamma5-SAR86c] Uncultured_bacterium_clone_REDr7_1_4_partial_cds_AY250714 gi|46411188|gb|AY250714| Uncultured bacterium clone REDr7 1 4 proteorhodopsin gene, partial cds Uncultured bacterium clone REDr7 1 4 proteorhodopsin gene, partial cds AY250714 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 20-Apr-2004 #na collected_from_a_depth_of_10_m_at_a_station_in_the_northern_Red_Sea_near_the_entrance_to_the_Gulf_of_Suez_[27.17_N/34.22_E]_in_February_1999 Red Sea marine 27.17 34.22 Novel Proteorhodopsin variants from the Mediterranean and Red Seas Sabehi,G., Massana,R., Bielawski,J.P., Rosenberg,M., Delong,E.F. and Beja,O. Environ. Microbiol. 5 (10), 842849 (2003) 14510837 PCR amplified from plankton DNA extracts ATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCAGGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTACCTGGTCTTATTACTGATATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGAAACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTACAAATATGTGAATTCTACTTAATTCTTGCTGCTGCAACTAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCGAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTATCCTGTAGGTTATTTCACAGGTTACCTGATGGGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAAA MGKLLLILGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVPGLITDIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLQICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCA------GGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTACCTGGTCTTATTACTGATATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT------------------------------GAA---------------------ACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTACAAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA---ACTAATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCGAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTATCCTGTAGGTTATTTCACAGGTTACCTGATG------------------------------------GGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAAA------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------MGKLLLILGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVPGLITDIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLQICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SSK-------------------------------------- [IV-Gamma5-SAR86c]_AY598755 [IV-Gamma5-SAR86c] clone_ANT131_R1_4_AY598755 gi|47078706|gb|AY598755| Uncultured bacterium clone ANT131 R1 4 proteorhodopsin gene, partial cds. Uncultured bacterium clone ANT131 R1 4 proteorhodopsin gene, partial cds. AY598755 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 13-oct-04 #na Red Sea water Red Sea marine 27.17 34.22 Characterization of RS29, a blue-green proteorhodopsin variant from the Red Sea Man-Aharonovich,D., Sabehi,G., Sineshchekov,O.A., Spudich,E.N., Spudich,J.L. and Beja,O. Photochem. Photobiol. Sci. 3 (5), 459-462 (2004) 15122363 #na ATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCAGGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTACCTGGTCTTATTACTGATATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGAAGCTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTACAAATATGTGAATTCTACTTAATTCTTGCTGCTGCAACTAATGTTGCTGGATCATTATTTAAAGAAAATTACCTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCGAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATCTATCCTGTAGGTTATTTCACAGGTTACCTGATGGGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGC MGKLLLILGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVPGLITDIAFWHYMYMRGVWIEAGDSPTVFRYIDWLLTVPLQICEFYLILAAATNVAGSLFKENYLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSN ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCA------GGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTACCTGGTCTTATTACTGATATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT------------------------------GAA---------------------GCTGGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTACAAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA---ACTAATGTTGCTGGA---TCATTA------------------------------------TTTAAAGAAAATTACCTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCGAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATCTATCCTGTAGGTTATTTCACAGGTTACCTGATG------------------------------------GGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAAT------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------MGKLLLILGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVPGLITDIAFWHYMYMRGVWI----------E-------AGDSPTVFRYIDW--------LLTVPLQICEFYLILAA---A-TNVAG-SL------------FKENYLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SSN-------------------------------------- [IV-Gamma5-SAR86c]_AY598756 [IV-Gamma5-SAR86c] clone_RS29_AY598756 gi|47078708|gb|AY598756| Uncultured bacterium clone RS29 proteorhodopsin gene, partial cds. Uncultured bacterium clone RS29 proteorhodopsin gene, partial cds. AY598756 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 13-oct-04 #na Red Sea water Red Sea marine 27.17 34.22 Characterization of RS29, a blue-green proteorhodopsin variant from the Red Sea Man-Aharonovich,D., Sabehi,G., Sineshchekov,O.A., Spudich,E.N., Spudich,J.L. and Beja,O. Photochem. Photobiol. Sci. 3 (5), 459-462 (2004) 15122363 #na ATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCAGGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTACCTGGTCTTATTACTGATATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGAAACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTACAAATATGTGAATTCTACTTAATTCTTGCTGCTGCAACTAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCGAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTATCCTGTAGGTTATTTCACAGGTTACCTGATGGGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATT MGKLLLILGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVPGLITDIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLQICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSN ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCA------GGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTACCTGGTCTTATTACTGATATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT------------------------------GAA---------------------ACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTACAAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA---ACTAATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCGAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTATCCTGTAGGTTATTTCACAGGTTACCTGATG------------------------------------GGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAAT------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------MGKLLLILGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVPGLITDIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLQICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SSN-------------------------------------- [IV-Gamma5-SAR86c]_AY210910 [IV-Gamma5-SAR86c] Uncultured_bacterium_clone_REDF9_partial_cds_AY210910 gi|27804282|gb|AY210910| Uncultured bacterium clone REDF9 proteorhodopsin gene, partial cds Uncultured bacterium clone REDF9 proteorhodopsin gene, partial cds AY210910 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 30APR2004 #na collected_on_February_1999_from_a_station_in_the_northern_Red_Sea/near_the_entrance_to_the_Gulf_of_Suez_[27.17_N/34.22_E] Red Sea marine 27.17 34.22 Diversification and spectral tuning in marine proteorhodopsins Man,D., Wang,W., Sabehi,G., Aravind,L., Post,A.F., Massana,R., Spudich,E.N., Spudich,J.L. and Beja,O. EMBO J. 22 (8), 17251731 (2003) 12682005 PCR amplified from plankton DNA extracts ATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCAGGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTATTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGAAACTGGTGATTCGCCAACCGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAACTAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTATCCTGTAGGTTATTTCACAGGTTACCTGATGGGTGACGGTGGATCAGCACTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTCAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCT MGKLLLILGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLITGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGSIIWNVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCA------GGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTATTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT------------------------------GAA---------------------ACTGGTGATTCGCCAACCGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA---ACTAATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTATCCTGTAGGTTATTTCACAGGTTACCTGATG------------------------------------GGTGACGGTGGATCAGCACTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTCAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MGKLLLILGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLITGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGSIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_AY210909 [IV-Gamma5-SAR86c] Uncultured_bacterium_clone_REDB9_partial_cds_AY210909 gi|27804280|gb|AY210909| Uncultured bacterium clone REDB9 proteorhodopsin gene, partial cds Uncultured bacterium clone REDB9 proteorhodopsin gene, partial cds AY210909 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 30APR2004 #na collected_on_February_1999_from_a_station_in_the_northern_Red_Sea/near_the_entrance_to_the_Gulf_of_Suez_[27.17_N/34.22_E] Red Sea marine 27.17 34.22 Diversification and spectral tuning in marine proteorhodopsins Man,D., Wang,W., Sabehi,G., Aravind,L., Post,A.F., Massana,R., Spudich,E.N., Spudich,J.L. and Beja,O. EMBO J. 22 (8), 17251731 (2003) 12682005 PCR amplified from plankton DNA extracts ATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCAGGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTCCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTATTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGAAACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAACTAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTATCCTGTAGGTTATTTCACAGGTTACCTGATGGGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCT MGKLLLILGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFSFVERDRVSAKWKTSLTVSGLITGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCA------GGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTCCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTATTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT------------------------------GAA---------------------ACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA---ACTAATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTATCCTGTAGGTTATTTCACAGGTTACCTGATG------------------------------------GGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MGKLLLILGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFSFVERDRVSA-KWKTSLTVSGLITGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_AY210917 [IV-Gamma5-SAR86c] Uncultured_bacterium_clone_RED5_partial_cds_AY210917 gi|27804296|gb|AY210917| Uncultured bacterium clone RED5 proteorhodopsin gene, partial cds Uncultured bacterium clone RED5 proteorhodopsin gene, partial cds AY210917 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 30APR2004 #na collected_on_February_1999_from_a_station_in_the_northern_Red_Sea/near_the_entrance_to_the_Gulf_of_Suez_[27.17_N/34.22_E] Red Sea marine 27.17 34.22 Diversification and spectral tuning in marine proteorhodopsins Man,D., Wang,W., Sabehi,G., Aravind,L., Post,A.F., Massana,R., Spudich,E.N., Spudich,J.L. and Beja,O. EMBO J. 22 (8), 17251731 (2003) 12682005 PCR amplified from plankton DNA extracts ATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCAGGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAGCTGTATCTGGTCTTATTACTGGTATTGCGTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGAAACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAACTAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAGTCAGCTTACAACACAATGATGTATATCATCATCGTTGGTTGGGCAATATATCCTGTAGGTTATTTCACAGGTTACCTAATGGGTGACGGTGGATCAGCTCTTAATCTAAACCTTATTTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCT MGKLLLILGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLAVSGLITGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIVGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCA------GGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAGCTGTATCTGGTCTTATTACTGGTATTGCGTTCTGGCATTACATGTACATGAGAGGGGTATGGATT------------------------------GAA---------------------ACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA---ACTAATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAG---TCA---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCGTT---------------------------------------------------------------GGTTGG---------GCAATATATCCTGTAGGTTATTTCACAGGTTACCTAATG------------------------------------GGTGACGGTGGATCAGCTCTTAATCTAAACCTTATTTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MGKLLLILGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLAVSGLITGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIV---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_AY210908 [IV-Gamma5-SAR86c] Uncultured_bacterium_clone_REDA9_partial_cds_AY210908 gi|27804278|gb|AY210908| Uncultured bacterium clone REDA9 proteorhodopsin gene, partial cds Uncultured bacterium clone REDA9 proteorhodopsin gene, partial cds AY210908 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 30APR2004 #na collected_on_February_1999_from_a_station_in_the_northern_Red_Sea/near_the_entrance_to_the_Gulf_of_Suez_[27.17_N/34.22_E] Red Sea marine 27.17 34.22 Diversification and spectral tuning in marine proteorhodopsins Man,D., Wang,W., Sabehi,G., Aravind,L., Post,A.F., Massana,R., Spudich,E.N., Spudich,J.L. and Beja,O. EMBO J. 22 (8), 17251731 (2003) 12682005 PCR amplified from plankton DNA extracts ATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCAGGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAGCTGTATCTGGTCTTATTACTGGTATTGCGTTCTGGCATTGCATGTACATGAGAGGGGTATGGATTGAAACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAACTAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATTATCGTCTTTGGTTGGGCGATTTATCCTGTAGGTTATTTCACAGGTTACCTGATGGGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCT MGKLLLILGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLAVSGLITGIAFWHCMYMRGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIVFGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCA------GGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAGCTGTATCTGGTCTTATTACTGGTATTGCGTTCTGGCATTGCATGTACATGAGAGGGGTATGGATT------------------------------GAA---------------------ACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA---ACTAATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCGTCTTT---------------------------------------------------------------GGTTGG---------GCGATTTATCCTGTAGGTTATTTCACAGGTTACCTGATG------------------------------------GGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MGKLLLILGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLAVSGLITGIAFWHCMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIVF---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_JN648742 [IV-Gamma5-SAR86c] H5_Mayo2011_H5M13F_A5_MIX1_300_98_5198_env_samples_JN648742 gi|356818590|gb|JN648742| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648742 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na TTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAACTAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCCGCTGTGCAATCAGCTTACAACACAATGATGTATATTATCATCTTT LLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA---ACTAATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCCGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCATCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_JN648719 [IV-Gamma5-SAR86c] A1_MIX3_H6_Feb2011_D3_M13F_env_samples_JN648719 gi|356818544|gb|JN648719| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648719 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na CTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAACTAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATTATCATCTTT LTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA---ACTAATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCATCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_JN648721 [IV-Gamma5-SAR86c] 6_A2_MIX1_M13F_2010_env_samples_JN648721 gi|356818548|gb|JN648721| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648721 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na CTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAACTAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATTATCATCTTT LTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA---ACTAATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCATCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_JN648724 [IV-Gamma5-SAR86c] 18_A2_MIX1_MIX1_2010_env_samples_JN648724 gi|356818554|gb|JN648724| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648724 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na CTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAACTAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGACTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATTATCATCTTT LTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMTAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA---ACTAATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------ACTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCATCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------TA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_AY601905 [IV-Gamma5-SAR86c] clone_REDr7a3a5_AY601905 gi|47156895|gb|AY601905| Uncultured bacterium clone REDr7a3a5 proteorhodopsin gene, partial cds. Uncultured bacterium clone REDr7a3a5 proteorhodopsin gene, partial cds. AY601905 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 13-oct-04 #na collected from a depth of 60 m at a station in the northern Red Sea near the entrance to the Gulf of Suez (27.17 N, 34.22 E) in February 1999 Red Sea marine 27.17 34.22 Novel Proteorhodopsin variants from the Mediterranean and Red Seas Sabehi,G., Massana,R., Bielawski,J.P., Rosenberg,M., Delong,E.F. and Beja,O. Environ. Microbiol. 5 (10), 842-849 (2003) 14510837 #na ATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCAGGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGAAACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAACTAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTATCCTGTAGGTTATTTCACAGGTTACCTGATGGGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCTA MGKLLLILGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCA------GGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT------------------------------GAA---------------------ACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA---ACTAATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTATCCTGTAGGTTATTTCACAGGTTACCTGATG------------------------------------GGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MGKLLLILGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_AF349987 [IV-Gamma5-SAR86c] clone_MB_20m12_AF349987 gi|13560740|gb|AF349987| Uncultured bacterium clone MB 20m12 proteorhodopsin gene, partial cds. Uncultured bacterium clone MB 20m12 proteorhodopsin gene, partial cds. AF349987 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 11-MAY-2004 #na #na Pacific Ocean marine 36.7 -122.4 Proteorhodopsin phototrophy in the ocean Beja,O., Spudich,E.N., Spudich,J.L., Leclerc,M. and DeLong,E.F. Nature 411 (6839), 786-789 (2001) 11459054 #na ACCATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCAGGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGAAACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAGCTAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCCTACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTATCCTGTAGGTTATTTCACAGGTTACTTGATGGGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTA TMGKLLLILGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCA------GGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT------------------------------GAA---------------------ACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA---GCTAATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCC---TAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTATCCTGTAGGTTATTTCACAGGTTACTTGATG------------------------------------GGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCT--------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------TMGKLLLILGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-ANVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SS--------------------------------------- [IV-Gamma5-SAR86c]_EU916026 [IV-Gamma5-SAR86c] clone_4S17-24_EU916026 gi|229358933|gb|EU916026| Uncultured bacterium clone 4S17-24 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 4S17-24 putative proteorhodopsin gene, partial cds. EU916026 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916014 [IV-Gamma5-SAR86c] clone_4S17-7_EU916014 gi|229358909|gb|EU916014| Uncultured bacterium clone 4S17-7 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 4S17-7 putative proteorhodopsin gene, partial cds. EU916014 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTACTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTCACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVTAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAHNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTACTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---CAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVTA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-H-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916051 [IV-Gamma5-SAR86c] clone_UM7-41_EU916051 gi|229358983|gb|EU916051| Uncultured bacterium clone UM7-41 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone UM7-41 putative proteorhodopsin gene, partial cds. EU916051 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATTATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGCATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATTATCGTATTTGGTTGGGCG LASTVFFFVERDRVSAKWKTLLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWAYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIVFGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATTATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGCATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCGTATTT---------------------------------------------------------------GGTTGG---------GCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTLLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWAYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIVF---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916037 [IV-Gamma5-SAR86c] clone_UM7-9_EU916037 gi|229358955|gb|EU916037| Uncultured bacterium clone UM7-9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone UM7-9 putative proteorhodopsin gene, partial cds. EU916037 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTATATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTATGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATTATCATCTTTGGTTGGGCT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLVGSLVMLMFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTATATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTATGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLMFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_AF349993 [IV-Gamma5-SAR86c] clone_MB_100m9_AF349993 gi|13560752|gb|AF349993| Uncultured bacterium clone MB 100m9 proteorhodopsin gene, partial cds. Uncultured bacterium clone MB 100m9 proteorhodopsin gene, partial cds. AF349993 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 11-MAY-2004 #na #na Pacific Ocean marine 36.7 -122.4 Proteorhodopsin phototrophy in the ocean Beja,O., Spudich,E.N., Spudich,J.L., Leclerc,M. and DeLong,E.F. Nature 411 (6839), 786-789 (2001) 11459054 #na ACCATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCAGGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTATATGAGAGGGGTATGGATTGAAACTGGTGATTCGCCAACTGTATTTAGATACATAGATTGGTTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCCGCTGCAACTAATGTTGCTGGATCATTATTTAAGAAATTACTTGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATCATCATCTTTGGTTGGGCGATTTATCCTGTAGGTTATTTCACAGGTTACCTTATGGGTGACGGTGGATCAGCACTTAACTTAAACCTTATTTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCT TMGKLLLILGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCA------GGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTATATGAGAGGGGTATGGATT------------------------------GAA---------------------ACTGGTGATTCGCCAACTGTATTTAGATACATAGATTGG------------------------TTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCCGCT---------GCA---ACTAATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTTGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTATCCTGTAGGTTATTTCACAGGTTACCTTATG------------------------------------GGTGACGGTGGATCAGCACTTAACTTAAACCTTATTTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------TMGKLLLILGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_AF349990 [IV-Gamma5-SAR86c] clone_MB_40m12_AF349990 gi|13560746|gb|AF349990| Uncultured bacterium clone MB 40m12 proteorhodopsin gene, partial cds. Uncultured bacterium clone MB 40m12 proteorhodopsin gene, partial cds. AF349990 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 11-MAY-2004 #na #na Pacific Ocean marine 36.7 -122.4 Proteorhodopsin phototrophy in the ocean Beja,O., Spudich,E.N., Spudich,J.L., Leclerc,M. and DeLong,E.F. Nature 411 (6839), 786-789 (2001) 11459054 #na ACCATGGGTAAATTATTACGGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCAGGTGGCGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACAGCTGCTCTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTATATGAGAGGAGTATGGATTGAAACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAACTAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATCATCATCGTTGGTTGGGCGATTTATCCTGTAGGTTATTTCACAGGTTACCTGATGGGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCT TMGKLLRILGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIVGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCATGGGTAAATTATTACGGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCA------GGTGGCGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACAGCTGCTCTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTATATGAGAGGAGTATGGATT------------------------------GAA---------------------ACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA---ACTAATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCGTT---------------------------------------------------------------GGTTGG---------GCGATTTATCCTGTAGGTTATTTCACAGGTTACCTGATG------------------------------------GGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------TMGKLLRILGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIV---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_EU915986 [IV-Gamma5-SAR86c] clone_H10-3_EU915986 gi|229358853|gb|EU915986| Uncultured bacterium clone H10-3 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone H10-3 putative proteorhodopsin gene, partial cds. EU915986 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCTAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTATATGAGAGGAGTATGGATTGGTGATTCACCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTATGGGCTGGAGAAGGAAAATCTGCATGTAACACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTACATCGTCTTCGGATGGGCTATAATC LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIVFGWAII ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCT---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTATATGAGAGGAGTATGGATT---------------------------------------------------------GGTGATTCACCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAC------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTAC---ATCGTCTTC---------------------------------------------------------------GGATGG---------GCTATAATC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MY-IVF---------------------GW---AII--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU915981 [IV-Gamma5-SAR86c] clone_H8-11_EU915981 gi|229358843|gb|EU915981| Uncultured bacterium clone H8-11 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone H8-11 putative proteorhodopsin gene, partial cds. EU915981 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCTAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACCGGTATTGCTTTCTGGCATTACATGTATATGAGAGGAGTATGGATTGGTGATTCACCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTATGGGCTGGAGAAGGAAAATCTGCATGTAACACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTACATCATCATCTTTGGTTGGGCGATA LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCT---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACCGGTATTGCTTTCTGGCATTACATGTATATGAGAGGAGTATGGATT---------------------------------------------------------GGTGATTCACCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAC------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTACATCATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AI---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_AF349994 [IV-Gamma5-SAR86c] clone_MB_100m10_AF349994 gi|13560754|gb|AF349994| Uncultured bacterium clone MB 100m10 proteorhodopsin gene, partial cds. Uncultured bacterium clone MB 100m10 proteorhodopsin gene, partial cds. AF349994 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 11-MAY-2004 #na #na Pacific Ocean marine 36.7 -122.4 Proteorhodopsin phototrophy in the ocean Beja,O., Spudich,E.N., Spudich,J.L., Leclerc,M. and DeLong,E.F. Nature 411 (6839), 786-789 (2001) 11459054 #na ACCATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCAGGTGGCGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACAGCTGCTCTATTAGCGTCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTATATGAGAGGAGTATGGATTGAAACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAACTAATGTTGCCGGCTCATTATTTAAGAAACTTCTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATAATGGCGGCTTGGCCTGCATTCATCGTTGGATGTTTAGCATGGGTATATATGATTTATGAACTATGGGCTGGTGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTACAGTCAGCTTACAACACAATGATGTATATCATCATCGTTGGTTGGGCAATTTATCCTGTAGGTTATTTCACAGGTTACCTAATGGGTGACGGTGGATCAGCTCTTAATCTAAACCTTATTTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCT TMGKLLLILGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIVGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIVGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCA------GGTGGCGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACAGCTGCTCTATTAGCGTCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTATATGAGAGGAGTATGGATT------------------------------GAA---------------------ACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA---ACTAATGTTGCCGGC---TCATTA------------------------------------TTTAAGAAA---CTTCTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATA---------------------------------ATG------------------------------------------------------------------GCGGCT------------------TGGCCTGCA---TTCATCGTTGGATGTTTAGCATGGGTATATATGATTTATGAACTA---------------TGG------GCT---GGTGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTA---CAG---TCA---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCGTT---------------------------------------------------------------GGTTGG---------GCAATTTATCCTGTAGGTTATTTCACAGGTTACCTAATG------------------------------------GGTGACGGTGGATCAGCTCTTAATCTAAACCTTATTTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------TMGKLLLILGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIVGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIV---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_AF349988 [IV-Gamma5-SAR86c] clone_MB_40m1_AF349988 gi|13560742|gb|AF349988| Uncultured bacterium clone MB 40m1 proteorhodopsin gene, partial cds. Uncultured bacterium clone MB 40m1 proteorhodopsin gene, partial cds. AF349988 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 11-MAY-2004 #na #na Pacific Ocean marine 36.7 -122.4 Proteorhodopsin phototrophy in the ocean Beja,O., Spudich,E.N., Spudich,J.L., Leclerc,M. and DeLong,E.F. Nature 411 (6839), 786-789 (2001) 11459054 #na ACCATGGGTAAATTATTACTGATAATAGGTAGTGTTATTGCACTTCCTACATTTGCTGCAGGTGGCGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACAGCTGCTCTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGAGTATGGATTGAAACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAACTAATGTTGCCGGCTCATTATTTAAGAAACTTCTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATTATGGCAGCTTGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATATATGATTTATGAACTATATGCTGGAGAAGGAAAATCTGCATGTAATACAGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATTATCGTCTTTGGTTGGGCGATTTATCCTGTAGGTTATTTCACAGGTTACCTGATGGGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCT TMGKLLLIIGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELYAGEGKSACNTASPAVQSAYNTMMYIIVFGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCATGGGTAAATTATTACTGATAATAGGTAGTGTTATTGCACTTCCTACATTTGCTGCA------GGTGGCGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACAGCTGCTCTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGAGTATGGATT------------------------------GAA---------------------ACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA---ACTAATGTTGCCGGC---TCATTA------------------------------------TTTAAGAAA---CTTCTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATATATGATTTATGAACTA---------------TAT------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACA---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCGTCTTT---------------------------------------------------------------GGTTGG---------GCGATTTATCCTGTAGGTTATTTCACAGGTTACCTGATG------------------------------------GGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------TMGKLLLIIGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----Y--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIVF---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_AF349977 [IV-Gamma5-SAR86c] clone_BAC_EBAC64A5_AF349977 gi|13560720|gb|AF349977| Uncultured bacterium clone BAC EBAC64A5 proteorhodopsin gene, partial cds. Uncultured bacterium clone BAC EBAC64A5 proteorhodopsin gene, partial cds. AF349977 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 11-MAY-2004 #na #na Pacific Ocean marine 36.7 -122.4 Proteorhodopsin phototrophy in the ocean Beja,O., Spudich,E.N., Spudich,J.L., Leclerc,M. and DeLong,E.F. Nature 411 (6839), 786-789 (2001) 11459054 #na ACCATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCAGGTGGCGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACAGCTGCTCTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGAGTATGGATTGAAACTGGTGATTCGCCTACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAACTAATGTTGCCGGCTCATTATTTAAGAAACTTCTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATTATGGCAGCTTGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTATATGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTTCGGTTCAATCAGCTTACAACACAATGATGGCTATCATAGTCTTCGGTTGGGCAATTTATCCTATAGGTTATTTCACAGGTTACCTAATGGGTGACGGTGGATCAGCTCTTAACTTAAACCTTATTTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCTAAGG TMGKLLLILGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELYAGEGKSACNTASPSVQSAYNTMMAIIVFGWAIYPIGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSNAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCA------GGTGGCGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACAGCTGCTCTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGAGTATGGATT------------------------------GAA---------------------ACTGGTGATTCGCCTACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA---ACTAATGTTGCCGGC---TCATTA------------------------------------TTTAAGAAA---CTTCTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTA---------------TAT------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTTCGGTT---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGGCTATCATAGTCTTC---------------------------------------------------------------GGTTGG---------GCAATTTATCCTATAGGTTATTTCACAGGTTACCTAATG------------------------------------GGTGACGGTGGATCAGCTCTTAACTTAAACCTTATTTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCTAAG------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------TMGKLLLILGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----Y--A-GE-GKSACN--T-ASPSV-Q-S-A-Y-N-TM-MAIIVF---------------------GW---AIYPIGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNAK------------------------------------ [IV-Gamma5-SAR86c]_AF349991 [IV-Gamma5-SAR86c] clone_MB_100m5_AF349991 gi|13560748|gb|AF349991| Uncultured bacterium clone MB 100m5 proteorhodopsin gene, partial cds. Uncultured bacterium clone MB 100m5 proteorhodopsin gene, partial cds. AF349991 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 11-MAY-2004 #na #na Pacific Ocean marine 36.7 -122.4 Proteorhodopsin phototrophy in the ocean Beja,O., Spudich,E.N., Spudich,J.L., Leclerc,M. and DeLong,E.F. Nature 411 (6839), 786-789 (2001) 11459054 #na ACCATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCAGGTGGCGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACAGCTGCTCTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGAGTATGGATTGAAACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAACTAATGTTGCCGGCTCATTATTTAAGAAACTTCTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATTATGGCAGCTTGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTATATGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTTCGGTTCAATCAGCTTACAACACAATGATGGCTATCATAGTCTTCGGTTGGGCAATTTATCCTGTAGGTTATTTCACAGGTTACCTAATGGGTGACGGTGGATCAGCTCTTAACTTAAACCTTATTTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCT TMGKLLLILGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELYAGEGKSACNTASPSVQSAYNTMMAIIVFGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCA------GGTGGCGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACAGCTGCTCTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGAGTATGGATT------------------------------GAA---------------------ACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA---ACTAATGTTGCCGGC---TCATTA------------------------------------TTTAAGAAA---CTTCTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTA---------------TAT------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTTCGGTT---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGGCTATCATAGTCTTC---------------------------------------------------------------GGTTGG---------GCAATTTATCCTGTAGGTTATTTCACAGGTTACCTAATG------------------------------------GGTGACGGTGGATCAGCTCTTAACTTAAACCTTATTTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------TMGKLLLILGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----Y--A-GE-GKSACN--T-ASPSV-Q-S-A-Y-N-TM-MAIIVF---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_AF349992 [IV-Gamma5-SAR86c] clone_MB_100m7_AF349992 gi|13560750|gb|AF349992| Uncultured bacterium clone MB 100m7 proteorhodopsin gene, partial cds. Uncultured bacterium clone MB 100m7 proteorhodopsin gene, partial cds. AF349992 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 11-MAY-2004 #na #na Pacific Ocean marine 36.7 -122.4 Proteorhodopsin phototrophy in the ocean Beja,O., Spudich,E.N., Spudich,J.L., Leclerc,M. and DeLong,E.F. Nature 411 (6839), 786-789 (2001) 11459054 #na ACCATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCAGGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGAAACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCTACTAATGTTGCCGGCTCATTATTTAAGAAACTTCTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATTATGGCAGCTTGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTATATGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTTCGGTTCAATCAGCTTACAACACAATGATGGCTATCATAGTCTTCGGTTGGGCAATTTATCCTGTAGGTTATTTCACAGGTTACCTAATGGGTGACGGTGGATCAGCTCTTAACTTAAACCTTATTTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGCTGCTGTTAAAGAATCTTCTAATGCT TMGKLLLILGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELYAGEGKSACNTASPSVQSAYNTMMAIIVFGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNAAVKESSNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCA------GGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT------------------------------GAA---------------------ACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCT---ACTAATGTTGCCGGC---TCATTA------------------------------------TTTAAGAAA---CTTCTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTA---------------TAT------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTTCGGTT---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGGCTATCATAGTCTTC---------------------------------------------------------------GGTTGG---------GCAATTTATCCTGTAGGTTATTTCACAGGTTACCTAATG------------------------------------GGTGACGGTGGATCAGCTCTTAACTTAAACCTTATTTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGCTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------TMGKLLLILGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----Y--A-GE-GKSACN--T-ASPSV-Q-S-A-Y-N-TM-MAIIVF---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNAAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_AF349986 [IV-Gamma5-SAR86c] clone_MB_20m5_AF349986 gi|13560738|gb|AF349986| Uncultured bacterium clone MB 20m5 proteorhodopsin gene, partial cds. Uncultured bacterium clone MB 20m5 proteorhodopsin gene, partial cds. AF349986 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 11-MAY-2004 #na #na Pacific Ocean marine 36.7 -122.4 Proteorhodopsin phototrophy in the ocean Beja,O., Spudich,E.N., Spudich,J.L., Leclerc,M. and DeLong,E.F. Nature 411 (6839), 786-789 (2001) 11459054 #na ACCATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCAGGTGGCGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACAGCTGCTCTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGAAACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCTACTAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCACAAATTATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTATATGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTTCGGTTCAATCAGCTTACAACACAATGATGGCTATCATAGTCTTCGGTTGGGCAATTTATCCTGTAGGTTATTTCACAGGTTACCTAATGGGTGACGGTGGGTCAGCTCTTAACTTAAACCTTATTTATAACCTTGCTGACTTTGTTAACAAGATTCTACTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCT TMGKLLLILGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAQIMAAWPAFIIGCLAWVYMIYELYAGEGKSACNTASPSVQSAYNTMMAIIVFGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILLGLIIWNVAVKESSNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCA------GGTGGCGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACAGCTGCTCTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT------------------------------GAA---------------------ACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCT---ACTAATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------CAA------ATT---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTA---------------TAT------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTTCGGTT---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGGCTATCATAGTCTTC---------------------------------------------------------------GGTTGG---------GCAATTTATCCTGTAGGTTATTTCACAGGTTACCTAATG------------------------------------GGTGACGGTGGGTCAGCTCTTAACTTAAACCTTATTTATAACCTTGCTGACTTTGTTAACAAGATTCTACTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------TMGKLLLILGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------Q--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----Y--A-GE-GKSACN--T-ASPSV-Q-S-A-Y-N-TM-MAIIVF---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILLGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_AY250719 [IV-Gamma5-SAR86c] Uncultured_bacterium_clone_REDr7_1_16_partial_cds_AY250719 gi|29470235|gb|AY250719| Uncultured bacterium clone REDr7 1 16 proteorhodopsin gene, partial cds Uncultured bacterium clone REDr7 1 16 proteorhodopsin gene, partial cds AY250719 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 20-Apr-2004 #na collected_from_a_depth_of_10_m_at_a_station_in_the_northern_Red_Sea_near_the_entrance_to_the_Gulf_of_Suez_[27.17_N/34.22_E]_in_February_1999 Red Sea marine 27.17 34.22 Novel Proteorhodopsin variants from the Mediterranean and Red Seas Sabehi,G., Massana,R., Bielawski,J.P., Rosenberg,M., Delong,E.F. and Beja,O. Environ. Microbiol. 5 (10), 842849 (2003) 14510837 PCR amplified from plankton DNA extracts ATGGGTAAAAGATTAGTGATATTAGGTAGTGTTATTGCGCTTCCAACATTTGCCGCTGGTGGTGGTGACCTGGATGCTAGTGACTACACTGGTGTATCTTTCTGGTTAGTTACTGCTGCTCTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGACAGAGTTTCTGCTAAATGGAAAACATCATTAACAGTATCTGGTTTAGTTACTGGTATTGCTTTTTGGCATTACATGTACATGAGAGGTGTATGGATTGAAACTGGTGATTCACCAACTGTTTTTAGATACATCGACTGGTTGCTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTAGCAGCAGCTACTAACGTTGCTGGTTCTTTATTCAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATTATGGCAGCCTGGCCTGCATTCATTATAGGATGTTTAGCATGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAGTCTGCATGTAACACTGCAAGTCCTGCAGTTCAGTCAGCTTACAACACAATGATGTATATCATCATCTTTGGTTGGGCTATTTACCTTGTAGGTTATTTCACTGGTTACCTAATGGGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCT MGKRLVILGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYLVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAAAGATTAGTGATATTAGGTAGTGTTATTGCGCTTCCAACATTTGCCGCT------GGTGGTGGTGACCTGGATGCTAGTGACTACACTGGTGTATCTTTCTGGTTAGTTACTGCTGCTCTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGACAGAGTTTCTGCT---AAATGGAAAACATCATTAACAGTATCTGGTTTAGTTACTGGTATTGCTTTTTGGCATTACATGTACATGAGAGGTGTATGGATT------------------------------GAA---------------------ACTGGTGATTCACCAACTGTTTTTAGATACATCGACTGG------------------------TTGCTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTAGCAGCA---------GCT---ACTAACGTTGCTGGT---TCTTTA------------------------------------TTCAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------GCAGCC------------------TGGCCTGCA---TTCATTATAGGATGTTTAGCATGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAGTCTGCATGTAAC------ACT---GCAAGTCCTGCAGTT---CAG---TCA---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCTTT---------------------------------------------------------------GGTTGG---------GCTATTTACCTTGTAGGTTATTTCACTGGTTACCTAATG------------------------------------GGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MGKRLVILGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYLVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_AY250720 [IV-Gamma5-SAR86c] Uncultured_bacterium_clone_medA15r11b9_partial_cds_AY250720 gi|29470237|gb|AY250720| Uncultured bacterium clone medA15r11b9 proteorhodopsin gene, partial cds Uncultured bacterium clone medA15r11b9 proteorhodopsin gene, partial cds AY250720 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 20-Apr-2004 #na collected_from_a_depth_of_5_m_at_a_station_in_the_Alboran_Sea_[30_N/4.25_W]_in_May_1998 Mediterranean Sea marine 36 -4.25 Novel Proteorhodopsin variants from the Mediterranean and Red Seas Sabehi,G., Massana,R., Bielawski,J.P., Rosenberg,M., Delong,E.F. and Beja,O. Environ. Microbiol. 5 (10), 842849 (2003) 14510837 PCR amplified from plankton DNA extracts ATGGGTAAAGCATTACTGATGTTAGGTAGTGTTATTGCGCTTCCAACATTTGCCGCTGGTGGTGGTGACCTGGATGCTAGTGACTACACTGGTGTATCTTTCTGGTTAGTTACTGCTGCTCCATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGACAGAGTTTCTGCTAAATGGAAAACATCATTAACAGTATCTGGTTTAGTTACTGGTATTGCTTTTTGGCATTACATGTACATGAGAGGTGTATGGATTGAAACTGGTGATTCACCAACTGTTTTTAGATACATCGACTGGTTGCTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTAGCAGCAGCTACTAACGTTGCTGGTTCTTTATTCAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATTATGGCAGCCTGGCCTGCATTCATTATAGGATGTTTAGCATGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAGTCTGCATGTAACACTGCAAGTCCTGCAGTTCAGTCAGCTTACAACACAATGATGTATATCATCATCTTTGGTTGGGCTATTTACCTTGTAGGTTATTTCACTGGTTACCTAATGGGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATAAGGAATGTTGCTGTTAAAGAATCTTCTAATGCT MGKALLMLGSVIALPTFAAGGGDLDASDYTGVSFWLVTAAPLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYLVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIRNVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAAGCATTACTGATGTTAGGTAGTGTTATTGCGCTTCCAACATTTGCCGCT------GGTGGTGGTGACCTGGATGCTAGTGACTACACTGGTGTATCTTTCTGGTTAGTTACTGCTGCTCCATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGACAGAGTTTCTGCT---AAATGGAAAACATCATTAACAGTATCTGGTTTAGTTACTGGTATTGCTTTTTGGCATTACATGTACATGAGAGGTGTATGGATT------------------------------GAA---------------------ACTGGTGATTCACCAACTGTTTTTAGATACATCGACTGG------------------------TTGCTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTAGCAGCA---------GCT---ACTAACGTTGCTGGT---TCTTTA------------------------------------TTCAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------GCAGCC------------------TGGCCTGCA---TTCATTATAGGATGTTTAGCATGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAGTCTGCATGTAAC------ACT---GCAAGTCCTGCAGTT---CAG---TCA---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCTTT---------------------------------------------------------------GGTTGG---------GCTATTTACCTTGTAGGTTATTTCACTGGTTACCTAATG------------------------------------GGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATAAGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MGKALLMLGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAAPLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYLVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIRNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_AY210915 [IV-Gamma5-SAR86c] Uncultured_bacterium_clone_RED30_partial_cds_AY210915 gi|27804292|gb|AY210915| Uncultured bacterium clone RED30 proteorhodopsin gene, partial cds Uncultured bacterium clone RED30 proteorhodopsin gene, partial cds AY210915 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 30APR2004 #na collected_on_February_1999_from_a_station_in_the_northern_Red_Sea/near_the_entrance_to_the_Gulf_of_Suez_[27.17_N/34.22_E] Red Sea marine 27.17 34.22 Diversification and spectral tuning in marine proteorhodopsins Man,D., Wang,W., Sabehi,G., Aravind,L., Post,A.F., Massana,R., Spudich,E.N., Spudich,J.L. and Beja,O. EMBO J. 22 (8), 17251731 (2003) 12682005 PCR amplified from plankton DNA extracts ATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCGCTTCCAACATTTGCCGCTGGCGGTGGCGATCTTGATGCTAGTGACTACACTGGTGTTTCTTTCTGGTTAGTTACTGCTGCTCTATTAGCATCTACTGTATTCTTCTTTGTTGAAAGGGATAGAGTATCTGCAAAATGGAAAACTTCATTAACAGTATCTGGTTTAGTTACTGGTATTGCTTTTTGGCATTATATGTACATGAGAGGTGTATGGATAGAAACTGGTAGTTCACCTACTGTCTTTAGATACATTGACTGGCTATTAACAGTGCCTTTACTAATATGTGAGTTCTATTTAATACTTGCCGCAGCTACTAATGTTGCTGGTTCATTATTTAAGAAATTGCTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATTATGGCAGCCTGGCCTGCATTCATTATAGGATGTTTAGCATGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAGTCTGCATGTAACACTGCAAGTCCTGCAGTTCAGTCAGCTTACAACACAATGATGTATATCATCATCTTTGGTTGGGCTATTTACCTTGTAGGTTATTTCACTGGTTACCTAATGGGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCT MGKLLLILGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGSSPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYLVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCGCTTCCAACATTTGCCGCT------GGCGGTGGCGATCTTGATGCTAGTGACTACACTGGTGTTTCTTTCTGGTTAGTTACTGCTGCTCTATTAGCATCTACTGTATTCTTCTTTGTTGAAAGGGATAGAGTATCTGCA---AAATGGAAAACTTCATTAACAGTATCTGGTTTAGTTACTGGTATTGCTTTTTGGCATTATATGTACATGAGAGGTGTATGGATA------------------------------GAA---------------------ACTGGTAGTTCACCTACTGTCTTTAGATACATTGACTGG------------------------CTATTAACAGTGCCTTTACTAATATGTGAGTTCTATTTAATACTTGCCGCA---------GCT---ACTAATGTTGCTGGT---TCATTA------------------------------------TTTAAGAAA---TTGCTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------GCAGCC------------------TGGCCTGCA---TTCATTATAGGATGTTTAGCATGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAGTCTGCATGTAAC------ACT---GCAAGTCCTGCAGTT---CAG---TCA---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCTTT---------------------------------------------------------------GGTTGG---------GCTATTTACCTTGTAGGTTATTTCACTGGTTACCTAATG------------------------------------GGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MGKLLLILGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGSSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYLVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_AY210914 [IV-Gamma5-SAR86c] Uncultured_bacterium_clone_RED27_partial_cds_AY210914 gi|27804290|gb|AY210914| Uncultured bacterium clone RED27 proteorhodopsin gene, partial cds Uncultured bacterium clone RED27 proteorhodopsin gene, partial cds AY210914 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 30APR2004 #na collected_on_February_1999_from_a_station_in_the_northern_Red_Sea/near_the_entrance_to_the_Gulf_of_Suez_[27.17_N/34.22_E] Red Sea marine 27.17 34.22 Diversification and spectral tuning in marine proteorhodopsins Man,D., Wang,W., Sabehi,G., Aravind,L., Post,A.F., Massana,R., Spudich,E.N., Spudich,J.L. and Beja,O. EMBO J. 22 (8), 17251731 (2003) 12682005 PCR amplified from plankton DNA extracts ATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCGCTTCCAACATTTGCCGCTGGTGGTGGTGACCTGGATGCTAGTGACTACACTGGTGTATCTTTCTGGTTAGTTACTGCTGCTCTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGACAGAGTTTCTGCTAAATGGAAAACATCATTAACAGTATCTGGTTTAGTTACTGGTATTGCTTTTTGGCATTACATGTACATGAGAGGTGTATGGATTGAAACTGGTGATTCACCAACTGTTTTTAGATACATCGACTGGTTGCTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTAGCAGCAGCTACTAACGTTGCTGGTTCTTTATTCAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATTATGGCAGCCTGGCCTGCATTCATTATAGGATGTTTAGCATGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAGTCTGCATGTAACACTGCAAGTCCTGCAGTTCAGTCAGCTTACAACACAATGATGTATATCATCATCTTTGGTTGGGCTATTTACCTTGTAGGTTATTTCACTGGTTACCTAATGGGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCT MGKLLLILGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYLVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCGCTTCCAACATTTGCCGCT------GGTGGTGGTGACCTGGATGCTAGTGACTACACTGGTGTATCTTTCTGGTTAGTTACTGCTGCTCTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGACAGAGTTTCTGCT---AAATGGAAAACATCATTAACAGTATCTGGTTTAGTTACTGGTATTGCTTTTTGGCATTACATGTACATGAGAGGTGTATGGATT------------------------------GAA---------------------ACTGGTGATTCACCAACTGTTTTTAGATACATCGACTGG------------------------TTGCTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTAGCAGCA---------GCT---ACTAACGTTGCTGGT---TCTTTA------------------------------------TTCAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------GCAGCC------------------TGGCCTGCA---TTCATTATAGGATGTTTAGCATGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAGTCTGCATGTAAC------ACT---GCAAGTCCTGCAGTT---CAG---TCA---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCTTT---------------------------------------------------------------GGTTGG---------GCTATTTACCTTGTAGGTTATTTCACTGGTTACCTAATG------------------------------------GGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MGKLLLILGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYLVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_AY210905 [IV-Gamma5-SAR86c] Uncultured_bacterium_clone_MED202_partial_cds_AY210905 gi|27804272|gb|AY210905| Uncultured bacterium clone MED202 proteorhodopsin gene, partial cds Uncultured bacterium clone MED202 proteorhodopsin gene, partial cds AY210905 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 30APR2004 #na collected_on_May_1998_from_the_Mediterranean_Alboran_Sea_[36.0_N/4.25_W] Mediterranean Sea marine 36 -4.25 Diversification and spectral tuning in marine proteorhodopsins Man,D., Wang,W., Sabehi,G., Aravind,L., Post,A.F., Massana,R., Spudich,E.N., Spudich,J.L. and Beja,O. EMBO J. 22 (8), 17251731 (2003) 12682005 PCR amplified from plankton DNA extracts ATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCGCTTCCAACATTTGCCGCTGGTGGTGGTGACCTGGATGCTAGTGACTACACTGGTGTATCTTTCTGGTTAGTTACTGCTGCTCTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGACAGAGTTTCTGCTAAATGGAAAACATCATTAACAGTATCTGGTTTAGTTACTGGTATTGCTTTTTGGCATTACATGTACATGAGAGGTGTATGGATTGAAACTGGTGATTCACCAACTGTTTTTAGATACATCGACTGGTTGCTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTAGCAGCAGCTACTAACGTTGCTGGTTCTTTATTCAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATTATGGCAGCCTGGCCTGCATTCATTATAGGATGTTTAGCATGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAGTCTGCATGTAACACTGCAAGTCCTGCAGTTCAGTCAGCTTACAACACAATGATGTATATCATCATCTTTGGTTGGGCTATTTACCTTGTAGGTTATTTCACTGGTTACCTAATGGGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCT MGKLLLILGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYLVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCGCTTCCAACATTTGCCGCT------GGTGGTGGTGACCTGGATGCTAGTGACTACACTGGTGTATCTTTCTGGTTAGTTACTGCTGCTCTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGACAGAGTTTCTGCT---AAATGGAAAACATCATTAACAGTATCTGGTTTAGTTACTGGTATTGCTTTTTGGCATTACATGTACATGAGAGGTGTATGGATT------------------------------GAA---------------------ACTGGTGATTCACCAACTGTTTTTAGATACATCGACTGG------------------------TTGCTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTAGCAGCA---------GCT---ACTAACGTTGCTGGT---TCTTTA------------------------------------TTCAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------GCAGCC------------------TGGCCTGCA---TTCATTATAGGATGTTTAGCATGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAGTCTGCATGTAAC------ACT---GCAAGTCCTGCAGTT---CAG---TCA---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCTTT---------------------------------------------------------------GGTTGG---------GCTATTTACCTTGTAGGTTATTTCACTGGTTACCTAATG------------------------------------GGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MGKLLLILGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYLVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_KJ926144 [IV-Gamma5-SAR86c] BOUM_OTU057_env_samples gb|KJ926144| Uncultured bacterium clone BOUM OTU057 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU057 putative proteorhodopsin gene, partial cds KJ926144 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 31.0165 -10.0357 #na #na #na #na #na GTTGACTGGTTGCTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTAGCAGCAGCTACTAACGTTGCTGGTTCTTTATTCAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATTATGGCAGCCTGGCCTGCATTCATTATAGGATGTTTAGCATGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAGTCTGCATGTAACACTGCAAGTCCTGCAGTTCAGTCAGCTTACAACACAATGATGTATATCATCATTTTTGGCTGGGCGATATAC VDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGACTGG------------------------TTGCTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTAGCAGCA---------GCT---ACTAACGTTGCTGGT---TCTTTA------------------------------------TTCAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------GCAGCC------------------TGGCCTGCA---TTCATTATAGGATGTTTAGCATGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAGTCTGCATGTAAC------ACT---GCAAGTCCTGCAGTT---CAG---TCA---GCT---TAC---AAC---ACAATG---ATGTATATCATCATTTTT---------------------------------------------------------------GGCTGG---------GCGATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_AY210912 [IV-Gamma5-SAR86c] Uncultured_bacterium_clone_RED2_partial_cds_AY210912 gi|27804286|gb|AY210912| Uncultured bacterium clone RED2 proteorhodopsin gene, partial cds Uncultured bacterium clone RED2 proteorhodopsin gene, partial cds AY210912 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 30APR2004 #na collected_on_February_1999_from_a_station_in_the_northern_Red_Sea/near_the_entrance_to_the_Gulf_of_Suez_[27.17_N/34.22_E] Red Sea marine 27.17 34.22 Diversification and spectral tuning in marine proteorhodopsins Man,D., Wang,W., Sabehi,G., Aravind,L., Post,A.F., Massana,R., Spudich,E.N., Spudich,J.L. and Beja,O. EMBO J. 22 (8), 17251731 (2003) 12682005 PCR amplified from plankton DNA extracts ATGGGTAAATTATTACTGATATTAGGTAGTGTTATCGCGCTTCCAACATTTGCTGCTGGCGGTGGCGATCTTGATGCTAGTGACTATACTGGTGTTTCATTCTGGTTAGTTACTGCTGCTCTATTAGCGTCTACTGTATTCTTCTTTGTTGAAAGAGATAGAGTGTCTGCAAAATGGAAAACTTCATTAACAGTATCTGGTTTAGTTACTGGTATTGCTTTTTGGCATTATATGTACATGAGAGGTGTATGGATAGAAACTGGTGATTCGCCTACTGTCTTTAGATACATCGACTGGTTATTAACTGTGCCTTTACTAATATGTGAGTTCTATCTGATACTTGCTGCAGCTACTAATGTTGCTGGTTCATTATTTAAGAAATTGCTAGTTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATAATGGCAGCTTGGCCTGCATTCATCATTGGATGTTTAGCATGGGTATATATGATTTATGAACTATGGGCTGGTGAAGGAAAATCTGCATGCAATACTGCAAGTCCTGCTGTACAGTCAGCTTACAACACAATGATGTATATCATCATCGTTGGTTGGGCAATTTATCCTGTAGGCTATTTCACAGGTTACCTAATGGGTGACGGTGGATCAGCTCTTAATCTAAACCTTATTTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCT MGKLLLILGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIVGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAATTATTACTGATATTAGGTAGTGTTATCGCGCTTCCAACATTTGCTGCT------GGCGGTGGCGATCTTGATGCTAGTGACTATACTGGTGTTTCATTCTGGTTAGTTACTGCTGCTCTATTAGCGTCTACTGTATTCTTCTTTGTTGAAAGAGATAGAGTGTCTGCA---AAATGGAAAACTTCATTAACAGTATCTGGTTTAGTTACTGGTATTGCTTTTTGGCATTATATGTACATGAGAGGTGTATGGATA------------------------------GAA---------------------ACTGGTGATTCGCCTACTGTCTTTAGATACATCGACTGG------------------------TTATTAACTGTGCCTTTACTAATATGTGAGTTCTATCTGATACTTGCTGCA---------GCT---ACTAATGTTGCTGGT---TCATTA------------------------------------TTTAAGAAA---TTGCTAGTTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATA---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATCATTGGATGTTTAGCATGGGTATATATGATTTATGAACTA---------------TGG------GCT---GGTGAA---GGAAAATCTGCATGCAAT------ACT---GCAAGTCCTGCTGTA---CAG---TCA---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCGTT---------------------------------------------------------------GGTTGG---------GCAATTTATCCTGTAGGCTATTTCACAGGTTACCTAATG------------------------------------GGTGACGGTGGATCAGCTCTTAATCTAAACCTTATTTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MGKLLLILGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIV---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_AY210916 [IV-Gamma5-SAR86c] Uncultured_bacterium_clone_RED4_partial_cds_AY210916 gi|27804294|gb|AY210916| Uncultured bacterium clone RED4 proteorhodopsin gene, partial cds Uncultured bacterium clone RED4 proteorhodopsin gene, partial cds AY210916 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 30APR2004 #na collected_on_February_1999_from_a_station_in_the_northern_Red_Sea/near_the_entrance_to_the_Gulf_of_Suez_[27.17_N/34.22_E] Red Sea marine 27.17 34.22 Diversification and spectral tuning in marine proteorhodopsins Man,D., Wang,W., Sabehi,G., Aravind,L., Post,A.F., Massana,R., Spudich,E.N., Spudich,J.L. and Beja,O. EMBO J. 22 (8), 17251731 (2003) 12682005 PCR amplified from plankton DNA extracts ATGGGTAAATTATTACTGAGATTAGGTAGTGTTATCGCGCTTCCAACATTTGCTGCTGGCGGTGGCGATCTTGATGCTAGTGACTATACTGGTGTTTCATTCTGGTTAGTTACTGCTGCTCTATTAGCGTCTACTGTATTCTTCTTTGTTGAAAGAGATAGAGTGTCTGCAAAATGGAAAACTTCATTAACAGTATCTGGTTTAGTTACTGGTATTGCTTTTTGGCATTATATGTACATGAGAGGTGTATGGATAGAAACTGGTGATTCGCCTACTGTCTTTAGATACATCGACTGGTTATTAACTGTGCCTTTACTAATATGTGAGTTCTATCTGATACTTGCTGCAGCTACTAATGTTGCTGGTTCATTATTTAAGAAATTGCTAGTTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATAATGGCAGCTTGGCCTGCATTCATCATTGGATGTTTAGCATGGGTATATATGATTTATGAACTATGGGCTGGTGAAGGAAAATCTGCATGCAATACTGCAAGTCCTGCTGTACAGTCAGCTTACAACACAATGATGTATATCATCATCGTTGGTTGGGCAATTTATCCTGTAGGTTATTTCACAGGTTACCTAATGGGTGACGGTGGATCAGCTCTTAATCTAAACCTTATTTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCT MGKLLLRLGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIVGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAATTATTACTGAGATTAGGTAGTGTTATCGCGCTTCCAACATTTGCTGCT------GGCGGTGGCGATCTTGATGCTAGTGACTATACTGGTGTTTCATTCTGGTTAGTTACTGCTGCTCTATTAGCGTCTACTGTATTCTTCTTTGTTGAAAGAGATAGAGTGTCTGCA---AAATGGAAAACTTCATTAACAGTATCTGGTTTAGTTACTGGTATTGCTTTTTGGCATTATATGTACATGAGAGGTGTATGGATA------------------------------GAA---------------------ACTGGTGATTCGCCTACTGTCTTTAGATACATCGACTGG------------------------TTATTAACTGTGCCTTTACTAATATGTGAGTTCTATCTGATACTTGCTGCA---------GCT---ACTAATGTTGCTGGT---TCATTA------------------------------------TTTAAGAAA---TTGCTAGTTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATA---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATCATTGGATGTTTAGCATGGGTATATATGATTTATGAACTA---------------TGG------GCT---GGTGAA---GGAAAATCTGCATGCAAT------ACT---GCAAGTCCTGCTGTA---CAG---TCA---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCGTT---------------------------------------------------------------GGTTGG---------GCAATTTATCCTGTAGGTTATTTCACAGGTTACCTAATG------------------------------------GGTGACGGTGGATCAGCTCTTAATCTAAACCTTATTTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MGKLLLRLGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIV---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_AY210911 [IV-Gamma5-SAR86c] Uncultured_bacterium_clone_RED19_partial_cds_AY210911 gi|27804284|gb|AY210911| Uncultured bacterium clone RED19 proteorhodopsin gene, partial cds Uncultured bacterium clone RED19 proteorhodopsin gene, partial cds AY210911 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 30APR2004 #na collected_on_February_1999_from_a_station_in_the_northern_Red_Sea/near_the_entrance_to_the_Gulf_of_Suez_[27.17_N/34.22_E] Red Sea marine 27.17 34.22 Diversification and spectral tuning in marine proteorhodopsins Man,D., Wang,W., Sabehi,G., Aravind,L., Post,A.F., Massana,R., Spudich,E.N., Spudich,J.L. and Beja,O. EMBO J. 22 (8), 17251731 (2003) 12682005 PCR amplified from plankton DNA extracts ATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCAGGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCGTCTACTGTATTCTTCTTTGTTGAAAGAGATAGAGTGTCTGCAAAATGGAAAACTTCATTAACAGTATCTGGTTTAGTTACTGGTATTGCTTTTTGGCATTATATGTACATGAGAGGTGTATGGATAGAAACTGGTGATTCGCCTACTGTCTTTAGATACATCGACTGGTTATTAACTGTGCCTTTACTAATATGTGAGTTCTATCTGATACTTGCTGCAGCTACTAATGTTGCTGGTTCATTATTTAAGAAATTGCTAGTTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATAATGGCAGCTTGGCCTGCATTCATCATTGGGTGTTTAGCATGGGTATATATGATTTATGAACTATGGGCTGGTGAAGGAAAATCTGCATGCAATACTGCAAGTCCTGCTGTACAGTCAGCTTACAACACAATGATGTATATCATCATCGTTGGTTGGGCAATATATCCTGTAGGTTATTTCACAGGTTACCTAATGGGTGACGGTGGATCAGCTCTTAATCTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCT MGKLLLILGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIVGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCA------GGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCGTCTACTGTATTCTTCTTTGTTGAAAGAGATAGAGTGTCTGCA---AAATGGAAAACTTCATTAACAGTATCTGGTTTAGTTACTGGTATTGCTTTTTGGCATTATATGTACATGAGAGGTGTATGGATA------------------------------GAA---------------------ACTGGTGATTCGCCTACTGTCTTTAGATACATCGACTGG------------------------TTATTAACTGTGCCTTTACTAATATGTGAGTTCTATCTGATACTTGCTGCA---------GCT---ACTAATGTTGCTGGT---TCATTA------------------------------------TTTAAGAAA---TTGCTAGTTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATA---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATCATTGGGTGTTTAGCATGGGTATATATGATTTATGAACTA---------------TGG------GCT---GGTGAA---GGAAAATCTGCATGCAAT------ACT---GCAAGTCCTGCTGTA---CAG---TCA---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCGTT---------------------------------------------------------------GGTTGG---------GCAATATATCCTGTAGGTTATTTCACAGGTTACCTAATG------------------------------------GGTGACGGTGGATCAGCTCTTAATCTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MGKLLLILGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIV---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_AY210907 [IV-Gamma5-SAR86c] Uncultured_bacterium_clone_MED208_partial_cds_AY210907 gi|27804276|gb|AY210907| Uncultured bacterium clone MED208 proteorhodopsin gene, partial cds Uncultured bacterium clone MED208 proteorhodopsin gene, partial cds AY210907 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 30APR2004 #na collected_on_May_1998_from_the_Mediterranean_Alboran_Sea_[36.0_N/4.25_W] Mediterranean Sea marine 36 -4.25 Diversification and spectral tuning in marine proteorhodopsins Man,D., Wang,W., Sabehi,G., Aravind,L., Post,A.F., Massana,R., Spudich,E.N., Spudich,J.L. and Beja,O. EMBO J. 22 (8), 17251731 (2003) 12682005 PCR amplified from plankton DNA extracts ATGGGTAAATTATTACTGATATTAGGTAGTGTTATCGCGCTTCCAACATTTGCTGCTGGCGGTGGCGATCTTGATGCTAGTGACTACACTGGTGTTTCATTCTGGTTAGTTACTGCTGCTCTATTAGCGTCTACTGTATTCTTCTTTGTTGAAAGAGATAGAGTGTCTGCAAAATGGAAAACTTCATTAACAGTATCTGGTTTAGTTACTGGTATTGCTTTTTGGCATTATATGTACATGAGAGGTGTATGGATAGAAACTGGTGATTCGCCTACTGTCTTTAGATACATCGACTGGTTATTAACTGTGCCTTTACTAATATGTGAGTTCTATCTGATACTTGCTGCAGCTACTAATGTTGCTGGTTCATTATTTAAGAAATTGCTAGTTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATAATGGCAGCTTGGCCTGCATTCATCATTGGATGTTTAGCATGGGTATATATGATTTATGAACTATGGGCTGGTGAAGGAAAATCTGCATGCAATACTGCAAGTCCTGCTGTACAGTCAGCTTACAACACAATGATGTATATCATCATCGTTGGTTGGGCAATTTATCCTGTAGGTTATTTCACAGGTTACCTAATGGGTGACGGTGGATCAGCTCTTAATCTAAACCTTATTTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCT MGKLLLILGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIVGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAATTATTACTGATATTAGGTAGTGTTATCGCGCTTCCAACATTTGCTGCT------GGCGGTGGCGATCTTGATGCTAGTGACTACACTGGTGTTTCATTCTGGTTAGTTACTGCTGCTCTATTAGCGTCTACTGTATTCTTCTTTGTTGAAAGAGATAGAGTGTCTGCA---AAATGGAAAACTTCATTAACAGTATCTGGTTTAGTTACTGGTATTGCTTTTTGGCATTATATGTACATGAGAGGTGTATGGATA------------------------------GAA---------------------ACTGGTGATTCGCCTACTGTCTTTAGATACATCGACTGG------------------------TTATTAACTGTGCCTTTACTAATATGTGAGTTCTATCTGATACTTGCTGCA---------GCT---ACTAATGTTGCTGGT---TCATTA------------------------------------TTTAAGAAA---TTGCTAGTTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATA---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATCATTGGATGTTTAGCATGGGTATATATGATTTATGAACTA---------------TGG------GCT---GGTGAA---GGAAAATCTGCATGCAAT------ACT---GCAAGTCCTGCTGTA---CAG---TCA---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCGTT---------------------------------------------------------------GGTTGG---------GCAATTTATCCTGTAGGTTATTTCACAGGTTACCTAATG------------------------------------GGTGACGGTGGATCAGCTCTTAATCTAAACCTTATTTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MGKLLLILGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIV---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_AY210903 [IV-Gamma5-SAR86c] Uncultured_bacterium_clone_MED106_partial_cds_AY210903 gi|27804268|gb|AY210903| Uncultured bacterium clone MED106 proteorhodopsin gene, partial cds Uncultured bacterium clone MED106 proteorhodopsin gene, partial cds AY210903 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 30APR2004 #na collected_on_May_1998_from_the_Mediterranean_Alboran_Sea_[36.0_N/4.25_W] Mediterranean Sea marine 36 -4.25 Diversification and spectral tuning in marine proteorhodopsins Man,D., Wang,W., Sabehi,G., Aravind,L., Post,A.F., Massana,R., Spudich,E.N., Spudich,J.L. and Beja,O. EMBO J. 22 (8), 17251731 (2003) 12682005 PCR amplified from plankton DNA extracts ATGGGTAAATTATTACTGATATTAGGTAGTGTTATCGCGCTTCCAACATTTGCTGCTGGCGGTGGCGATCTTGATGCTAGTGACTATACTGGTGTTTCATTCTGGTTAGTTACTGCTGCTCTATTAGCGTCTACTGTATTCTTCTTTGTTGAAAGAGATAGAGTGTCTGCAAAATGGAAAACTTCATTAACAGTATCTGGTTTAGTTACTGGTATTGCTTTTTGGCATTATATGTACATGAGAGGTGTATGGATAGAAACTGGTGATTCGCCTACTGTCTTTAGATACATAGACTGGTTATTAACTGTGCCTTTACTAATATGTGAGTTCTATCTGATACTTGCTGCAGCTACTAATGTTGCTGGTTCATTATTTAAGAAATTGCTAGTTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATAATGGCAGCTTGGCCTGCATTCATCATTGGATGTTTAGCATGGGTATATATGATTTATGAACTATGGGCTGGTGAAGGAAAATCTGCATGCAATACTGCAAGTCCTGCTGTACAATCAGCTTACAACACAATGATGTATATCATCATCGTTGGTTGGGCAATTTATCCTGTAGGTTATTTCACAGGTTACCTAATGGGTGACGGTGGATCAGCTCTTAATCTAAACCTTATTTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCT MGKLLLILGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIVGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAATTATTACTGATATTAGGTAGTGTTATCGCGCTTCCAACATTTGCTGCT------GGCGGTGGCGATCTTGATGCTAGTGACTATACTGGTGTTTCATTCTGGTTAGTTACTGCTGCTCTATTAGCGTCTACTGTATTCTTCTTTGTTGAAAGAGATAGAGTGTCTGCA---AAATGGAAAACTTCATTAACAGTATCTGGTTTAGTTACTGGTATTGCTTTTTGGCATTATATGTACATGAGAGGTGTATGGATA------------------------------GAA---------------------ACTGGTGATTCGCCTACTGTCTTTAGATACATAGACTGG------------------------TTATTAACTGTGCCTTTACTAATATGTGAGTTCTATCTGATACTTGCTGCA---------GCT---ACTAATGTTGCTGGT---TCATTA------------------------------------TTTAAGAAA---TTGCTAGTTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATA---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATCATTGGATGTTTAGCATGGGTATATATGATTTATGAACTA---------------TGG------GCT---GGTGAA---GGAAAATCTGCATGCAAT------ACT---GCAAGTCCTGCTGTA---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCGTT---------------------------------------------------------------GGTTGG---------GCAATTTATCCTGTAGGTTATTTCACAGGTTACCTAATG------------------------------------GGTGACGGTGGATCAGCTCTTAATCTAAACCTTATTTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MGKLLLILGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIV---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_AY210901 [IV-Gamma5-SAR86c] Uncultured_bacterium_clone_MED101_partial_cds_AY210901 gi|27804264|gb|AY210901| Uncultured bacterium clone MED101 proteorhodopsin gene, partial cds Uncultured bacterium clone MED101 proteorhodopsin gene, partial cds AY210901 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 30APR2004 #na collected_on_May_1998_from_the_Mediterranean_Alboran_Sea_[36.0_N/4.25_W] Mediterranean Sea marine 36 -4.25 Diversification and spectral tuning in marine proteorhodopsins Man,D., Wang,W., Sabehi,G., Aravind,L., Post,A.F., Massana,R., Spudich,E.N., Spudich,J.L. and Beja,O. EMBO J. 22 (8), 17251731 (2003) 12682005 PCR amplified from plankton DNA extracts ATGGGTAAATTATTACTGATATTAGGTAGTGTTATCGCGCTTCCAACATTTGCTGCTGGCGGTGGCGATCTTGATGCTAGTGACTACACTGGTGTTTCATTCTGGTTAGTTACTGCTGCTCTATTAGCGTCTACTGTATTCTTCTTTGTTGAAAGAGATAGAGTGTCTGCAAAATGGAAAACTTCATTAACAGTATCTGGTTTAGTTACTGGTATTGCTTTTTGGCATTATATGTACATGAGAGGTGTATGGATAGAAACTGGTGATTCGCCTACTGTCTTTAGATACATCGACTGGTTATTAACTGTGCCTTTACTAATATGTGAGTTCTATCTGATACTTGCTGCAGCTACTAATGTTGCTGGTTCATTATTTAAGAAATTGCTAGTTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATAATGGCAGCTTGGCCTGCATTCATCATTGGATGTTTAGCATGGGTATATATGATTTATGAACTATGGGCTGGTGAAGGAAAATCTGCATGCAATACTGCAAGTCCTGCTGTACAGTCAGCTTACAACACAATGATGTATATCATCATCGTTGGTTGGGCAATTTATCCTGTAGGTTATTTCACAGGTTACCTAATGGGTGACGGTGGATCAGCTCTTAATCTAAACCTTATTTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCT MGKLLLILGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIVGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAATTATTACTGATATTAGGTAGTGTTATCGCGCTTCCAACATTTGCTGCT------GGCGGTGGCGATCTTGATGCTAGTGACTACACTGGTGTTTCATTCTGGTTAGTTACTGCTGCTCTATTAGCGTCTACTGTATTCTTCTTTGTTGAAAGAGATAGAGTGTCTGCA---AAATGGAAAACTTCATTAACAGTATCTGGTTTAGTTACTGGTATTGCTTTTTGGCATTATATGTACATGAGAGGTGTATGGATA------------------------------GAA---------------------ACTGGTGATTCGCCTACTGTCTTTAGATACATCGACTGG------------------------TTATTAACTGTGCCTTTACTAATATGTGAGTTCTATCTGATACTTGCTGCA---------GCT---ACTAATGTTGCTGGT---TCATTA------------------------------------TTTAAGAAA---TTGCTAGTTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATA---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATCATTGGATGTTTAGCATGGGTATATATGATTTATGAACTA---------------TGG------GCT---GGTGAA---GGAAAATCTGCATGCAAT------ACT---GCAAGTCCTGCTGTA---CAG---TCA---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCGTT---------------------------------------------------------------GGTTGG---------GCAATTTATCCTGTAGGTTATTTCACAGGTTACCTAATG------------------------------------GGTGACGGTGGATCAGCTCTTAATCTAAACCTTATTTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MGKLLLILGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIV---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_AY210902 [IV-Gamma5-SAR86c] Uncultured_bacterium_clone_MED102_partial_cds_AY210902 gi|27804266|gb|AY210902| Uncultured bacterium clone MED102 proteorhodopsin gene, partial cds Uncultured bacterium clone MED102 proteorhodopsin gene, partial cds AY210902 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 30APR2004 #na collected_on_May_1998_from_the_Mediterranean_Alboran_Sea_[36.0_N/4.25_W] Mediterranean Sea marine 36 -4.25 Diversification and spectral tuning in marine proteorhodopsins Man,D., Wang,W., Sabehi,G., Aravind,L., Post,A.F., Massana,R., Spudich,E.N., Spudich,J.L. and Beja,O. EMBO J. 22 (8), 17251731 (2003) 12682005 PCR amplified from plankton DNA extracts ATGGGTAAATTATTACTGATATTAGGTAGTGTTATCGCGCTTCCAACATTTGCTGCTGGCGGTGGCGATCTTGATGCTAGTGACTACACTGGTGTTTCATTCTGGTTAGTTACTGCTGCTCTATTAGCGTCTACTGTATTCTTCTTTGTTGAAAGAGATAGAGTGTCTGCAAAATGGAAAACTTCATTAACAGTATCTGGTTTAGTTACTGGTATTGCTTTTTGGCATTATATGTACATGAGAGGTGTATGGATAGAAACTGGTAGTTCACCTACTGTCTTTAGATACATTGACTGGCTATTAACAGTGCCTTTACTAATATGTGAGTTCTATTTAATACTTGCCGCAGCTACTAATGTTGCTGGTTCATTATTTAAGAAATTGCTAGTTGGTTCTCTTGTTATGCTTGTGTTCGGTTACATGGGTGAAGCAGGAATAATGGCAGCTTGGCCTGCATTCATCATTGGGTGTTTAGCATGGGTATATATGATTTATGAGCTATGGGCTGGTGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTACAGTCAGCTTACAACACAATGATGTATATCATCATCGCTGGTTGGGCAATTTATCCTGTAGGTTATTTCACAGGTTACCTAATGGGTGACGGTGGATCAGCTCTTAATCTAAACCTTAATTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCT MGKLLLILGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGSSPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIAGWAIYPVGYFTGYLMGDGGSALNLNLNYNLADFVNKILFGLIIWNVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAATTATTACTGATATTAGGTAGTGTTATCGCGCTTCCAACATTTGCTGCT------GGCGGTGGCGATCTTGATGCTAGTGACTACACTGGTGTTTCATTCTGGTTAGTTACTGCTGCTCTATTAGCGTCTACTGTATTCTTCTTTGTTGAAAGAGATAGAGTGTCTGCA---AAATGGAAAACTTCATTAACAGTATCTGGTTTAGTTACTGGTATTGCTTTTTGGCATTATATGTACATGAGAGGTGTATGGATA------------------------------GAA---------------------ACTGGTAGTTCACCTACTGTCTTTAGATACATTGACTGG------------------------CTATTAACAGTGCCTTTACTAATATGTGAGTTCTATTTAATACTTGCCGCA---------GCT---ACTAATGTTGCTGGT---TCATTA------------------------------------TTTAAGAAA---TTGCTAGTTGGTTCTCTTGTTATGCTTGTGTTCGGTTACATGGGTGAA---------GCA------------------GGA------ATA---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATCATTGGGTGTTTAGCATGGGTATATATGATTTATGAGCTA---------------TGG------GCT---GGTGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTA---CAG---TCA---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCGCT---------------------------------------------------------------GGTTGG---------GCAATTTATCCTGTAGGTTATTTCACAGGTTACCTAATG------------------------------------GGTGACGGTGGATCAGCTCTTAATCTAAACCTTAATTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MGKLLLILGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGSSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIA---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLNYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_AY210906 [IV-Gamma5-SAR86c] Uncultured_bacterium_clone_MED204_partial_cds_AY210906 gi|27804274|gb|AY210906| Uncultured bacterium clone MED204 proteorhodopsin gene, partial cds Uncultured bacterium clone MED204 proteorhodopsin gene, partial cds AY210906 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 30APR2004 #na collected_on_May_1998_from_the_Mediterranean_Alboran_Sea_[36.0_N/4.25_W] Mediterranean Sea marine 36 -4.25 Diversification and spectral tuning in marine proteorhodopsins Man,D., Wang,W., Sabehi,G., Aravind,L., Post,A.F., Massana,R., Spudich,E.N., Spudich,J.L. and Beja,O. EMBO J. 22 (8), 17251731 (2003) 12682005 PCR amplified from plankton DNA extracts ATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCGCTTCCAACATTTGCCGCTGGCGGTGGCGATCTTGATGCTAGTGACTACACTGGTGTTTCTTTCTGGTTAGTTACTGCTGCTCTATTAGCATCTACTGTATTCTTCTTTGTTGAAAGGGATAGAGTATCTGCAAAATGGAAAACTTCATTAACAGTATCTGGTTTAGTTACTGGTATTGCTTTTTGGCATTATATGTACATGAGAGGTGTATGGATAGAAACTGGTAGTTCACCTACTGTCTTTAGATACATTGACTGGCTATTAACAGTGCCTTTACTAATATGTGAGTTCTATTTAATACTTGCCGCAGCTACTAATGTTGCTGGTTCATTATTTAAGAAATTGCTAGTTGGTTCTCTTGTTATGCTTGTGTTCGGTTACATGGGTGAAGCAGGAATAATGGCAGCTTGGCCTGCATTCATCATTGGGTGTTTAGCATGGGTATATATGATTTATGAGCTATGGGCTGGTGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTACAGTCAGCTTACAACACAATGATGTATATCATCATCGCTGGTTGGGCAATTTATCCTGTAGGTTATTTCACAGGTTACCTAATGGGTGACGGTGGATCAGCTCTTAATCTAAACCTTATTTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCT MGKLLLILGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGSSPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIAGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCGCTTCCAACATTTGCCGCT------GGCGGTGGCGATCTTGATGCTAGTGACTACACTGGTGTTTCTTTCTGGTTAGTTACTGCTGCTCTATTAGCATCTACTGTATTCTTCTTTGTTGAAAGGGATAGAGTATCTGCA---AAATGGAAAACTTCATTAACAGTATCTGGTTTAGTTACTGGTATTGCTTTTTGGCATTATATGTACATGAGAGGTGTATGGATA------------------------------GAA---------------------ACTGGTAGTTCACCTACTGTCTTTAGATACATTGACTGG------------------------CTATTAACAGTGCCTTTACTAATATGTGAGTTCTATTTAATACTTGCCGCA---------GCT---ACTAATGTTGCTGGT---TCATTA------------------------------------TTTAAGAAA---TTGCTAGTTGGTTCTCTTGTTATGCTTGTGTTCGGTTACATGGGTGAA---------GCA------------------GGA------ATA---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATCATTGGGTGTTTAGCATGGGTATATATGATTTATGAGCTA---------------TGG------GCT---GGTGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTA---CAG---TCA---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCGCT---------------------------------------------------------------GGTTGG---------GCAATTTATCCTGTAGGTTATTTCACAGGTTACCTAATG------------------------------------GGTGACGGTGGATCAGCTCTTAATCTAAACCTTATTTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MGKLLLILGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGSSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIA---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_AY210900 [IV-Gamma5-SAR86c] Uncultured_bacterium_clone_MED36_partial_cds_AY210900 gi|27804262|gb|AY210900| Uncultured bacterium clone MED36 proteorhodopsin gene, partial cds Uncultured bacterium clone MED36 proteorhodopsin gene, partial cds AY210900 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 30APR2004 #na collected_on_May_1998_from_the_Mediterranean_Alboran_Sea_[36.0_N/4.25_W] Mediterranean Sea marine 36 -4.25 Diversification and spectral tuning in marine proteorhodopsins Man,D., Wang,W., Sabehi,G., Aravind,L., Post,A.F., Massana,R., Spudich,E.N., Spudich,J.L. and Beja,O. EMBO J. 22 (8), 17251731 (2003) 12682005 PCR amplified from plankton DNA extracts ATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCGCTTCCAACATTTGCCGCTGGCGGTGGCGATCTTGATGCTAGTGACTACACTGGTGTTTCTTTCTGGTTAGTTACTGCTGCTCTATTAGCATCTACTGTATTCTTCTTTGTTGAAAGGGATAGAGTATCTGCAAAATGGAAAACTTCATTAACAGTATCTGGTTTAGTTACTGGTATTGCTTTTTGGCATTATATGTACATGAGAGGTGTATGGATAGAAACTGGTAGTTCACCTACTGTCTTTAGATACATTGACTGGCTATTAACAGTGCCTTTACTAATATGTGAGTTCTATTTAATACTTGCCGCAGCTACTAATGTTGCTGGTTCATTATTTAAGAAATTGCTAGTTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATAATGGCAGCTTGGCCTGCATTCATCATTGGATGTTTAGCATGGGTATATATGATTTATGAGCTATGGGCTGGTGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTACAGTCAGCTTACAACACAATGATGTATATCATCATCGCTGGTTGGGCAATTTATCCTGTAGGTTATTTCACAGGTTACCTAATGGGTGACGGTGGATCAGCTCTTAATCTAAACCTTATTTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCT MGKLLLILGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGSSPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIAGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCGCTTCCAACATTTGCCGCT------GGCGGTGGCGATCTTGATGCTAGTGACTACACTGGTGTTTCTTTCTGGTTAGTTACTGCTGCTCTATTAGCATCTACTGTATTCTTCTTTGTTGAAAGGGATAGAGTATCTGCA---AAATGGAAAACTTCATTAACAGTATCTGGTTTAGTTACTGGTATTGCTTTTTGGCATTATATGTACATGAGAGGTGTATGGATA------------------------------GAA---------------------ACTGGTAGTTCACCTACTGTCTTTAGATACATTGACTGG------------------------CTATTAACAGTGCCTTTACTAATATGTGAGTTCTATTTAATACTTGCCGCA---------GCT---ACTAATGTTGCTGGT---TCATTA------------------------------------TTTAAGAAA---TTGCTAGTTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATA---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATCATTGGATGTTTAGCATGGGTATATATGATTTATGAGCTA---------------TGG------GCT---GGTGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTA---CAG---TCA---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCGCT---------------------------------------------------------------GGTTGG---------GCAATTTATCCTGTAGGTTATTTCACAGGTTACCTAATG------------------------------------GGTGACGGTGGATCAGCTCTTAATCTAAACCTTATTTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MGKLLLILGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGSSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIA---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_AY210904 [IV-Gamma5-SAR86c] Uncultured_bacterium_clone_MED25_partial_cds_AY210904 gi|27804270|gb|AY210904| Uncultured bacterium clone MED25 proteorhodopsin gene, partial cds Uncultured bacterium clone MED25 proteorhodopsin gene, partial cds AY210904 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 30APR2004 #na collected_on_May_1998_from_the_Mediterranean_Alboran_Sea_[36.0_N/4.25_W] Mediterranean Sea marine 36 -4.25 Diversification and spectral tuning in marine proteorhodopsins Man,D., Wang,W., Sabehi,G., Aravind,L., Post,A.F., Massana,R., Spudich,E.N., Spudich,J.L. and Beja,O. EMBO J. 22 (8), 17251731 (2003) 12682005 PCR amplified from plankton DNA extracts ATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCGCTTCCAACATTTGCCGCTGGCGGTGGCGATCTTGATGCTAGTGACTACACTGGTGTTTCTTTCTGGTTAGTTACTGCTGCTCTATTAGCATCTACTGTATTCTTCTTTGTTGAAAGGGATAGAGTATCTGCAAAATGGAAAACTTCATTAACAGTATCTGGTTTAGTTACTGGTATTGCTTTTTGGCATTATATGTACATGAGAGGTGTATGGATAGAAACTGGTAGTTCACCTACTGTCTTTAGATACATTGACTGGCTATTAACAGTGCCTTTACTAATATGTGAGTTCTATTTAATACTTGCCGCAGCTACTAATGTTGCTGGTTCATTATTTAAGAAATTGCTAGTTGGTTCTCTTGTTATGCTTGTGTTCGGTTACATGGGTGAAGCAGGAATAATGGCAGCTTGGCCTGCATTCATCATTGGATGTTTAGCATGGGTATATATGATTTATGAACTATGGGCTGGTGAAGGAAAATCTGCATGCAATACTGCAAGTCCTGCTGTACAGTCAGCTTACAACACAATGATGTATATCATCATCGTTGGTTGGGCAATTTATCCTGTAGGTTATTTCACAGGTTACCTAATGGGTGACGGTGGATCAGCTCTTAATCTAAACCTTATTTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCT MGKLLLILGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGSSPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIVGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAATTATTACTGATATTAGGTAGTGTTATTGCGCTTCCAACATTTGCCGCT------GGCGGTGGCGATCTTGATGCTAGTGACTACACTGGTGTTTCTTTCTGGTTAGTTACTGCTGCTCTATTAGCATCTACTGTATTCTTCTTTGTTGAAAGGGATAGAGTATCTGCA---AAATGGAAAACTTCATTAACAGTATCTGGTTTAGTTACTGGTATTGCTTTTTGGCATTATATGTACATGAGAGGTGTATGGATA------------------------------GAA---------------------ACTGGTAGTTCACCTACTGTCTTTAGATACATTGACTGG------------------------CTATTAACAGTGCCTTTACTAATATGTGAGTTCTATTTAATACTTGCCGCA---------GCT---ACTAATGTTGCTGGT---TCATTA------------------------------------TTTAAGAAA---TTGCTAGTTGGTTCTCTTGTTATGCTTGTGTTCGGTTACATGGGTGAA---------GCA------------------GGA------ATA---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATCATTGGATGTTTAGCATGGGTATATATGATTTATGAACTA---------------TGG------GCT---GGTGAA---GGAAAATCTGCATGCAAT------ACT---GCAAGTCCTGCTGTA---CAG---TCA---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCGTT---------------------------------------------------------------GGTTGG---------GCAATTTATCCTGTAGGTTATTTCACAGGTTACCTAATG------------------------------------GGTGACGGTGGATCAGCTCTTAATCTAAACCTTATTTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MGKLLLILGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGSSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIV---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_AY210899 [IV-Gamma5-SAR86c] Uncultured_bacterium_clone_MED27_partial_cds_AY210899 gi|27804260|gb|AY210899| Uncultured bacterium clone MED27 proteorhodopsin gene, partial cds Uncultured bacterium clone MED27 proteorhodopsin gene, partial cds AY210899 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 30APR2004 #na collected_on_May_1998_from_the_Mediterranean_Alboran_Sea_[36.0_N/4.25_W] Mediterranean Sea marine 36 -4.25 Diversification and spectral tuning in marine proteorhodopsins Man,D., Wang,W., Sabehi,G., Aravind,L., Post,A.F., Massana,R., Spudich,E.N., Spudich,J.L. and Beja,O. EMBO J. 22 (8), 17251731 (2003) 12682005 PCR amplified from plankton DNA extracts ATGGGTAAATTATTACTGATATTAGGTAATGTTATCGCGCTTCCAACATTTGCTGCTGGCGGTGGCGATCTTGATGCTAGTGACTACACTGGTGTTTCATTCTGGTTAGTTACTGCTGCTCTATTAGCGTCTACTGTATTCTTCTTTGTTGAAAGAGATAGAGTGTCTGCAAAATGGAAAACTTCATTAACAGTATCTGGTTTAGTTACTGGTATTGCTTTTTGGCATTATATGTACATGAGAGGTGTATGGATAGAAACTGGTGATTCGCCTACTGTCTTTAGATACATCGACTGGTTATTAACTGTGCCTTTACTAATATGTGAGTTCTATCTGATACTTGCTGCAGCTACTAATGTTGCTGGTTCATTATTTAAGAAATTGCTAGTTGGTTCTCTTGTGATGCTTGTGTTCGGTTACATGGGTGAAGCAGGAATAATGGCAGCTTGGCCTGCATTCATCATTGGGTGTTTAGCATGGGTATATATGATTTATGAGCTATGGGCTGGTGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTACAGTCAGCTTACAACACTATGATGTATATTATCATTGTTGGTTGGGCGATTTATCCTGTAGGCTATTTCACTGGTTACCTCATGGGTGACGGTGGATCAGCTCTTAATTTAAACCTTATTTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCT MGKLLLILGNVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIVGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAATTATTACTGATATTAGGTAATGTTATCGCGCTTCCAACATTTGCTGCT------GGCGGTGGCGATCTTGATGCTAGTGACTACACTGGTGTTTCATTCTGGTTAGTTACTGCTGCTCTATTAGCGTCTACTGTATTCTTCTTTGTTGAAAGAGATAGAGTGTCTGCA---AAATGGAAAACTTCATTAACAGTATCTGGTTTAGTTACTGGTATTGCTTTTTGGCATTATATGTACATGAGAGGTGTATGGATA------------------------------GAA---------------------ACTGGTGATTCGCCTACTGTCTTTAGATACATCGACTGG------------------------TTATTAACTGTGCCTTTACTAATATGTGAGTTCTATCTGATACTTGCTGCA---------GCT---ACTAATGTTGCTGGT---TCATTA------------------------------------TTTAAGAAA---TTGCTAGTTGGTTCTCTTGTGATGCTTGTGTTCGGTTACATGGGTGAA---------GCA------------------GGA------ATA---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATCATTGGGTGTTTAGCATGGGTATATATGATTTATGAGCTA---------------TGG------GCT---GGTGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTA---CAG---TCA---GCT---TAC---AAC---ACTATG---ATGTATATTATCATTGTT---------------------------------------------------------------GGTTGG---------GCGATTTATCCTGTAGGCTATTTCACTGGTTACCTCATG------------------------------------GGTGACGGTGGATCAGCTCTTAATTTAAACCTTATTTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MGKLLLILGNVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIV---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_AY210898 [IV-Gamma5-SAR86c] Uncultured_bacterium_clone_MED26_partial_cds_AY210898 gi|27804258|gb|AY210898| Uncultured bacterium clone MED26 proteorhodopsin gene, partial cds Uncultured bacterium clone MED26 proteorhodopsin gene, partial cds AY210898 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 30APR2004 #na collected_on_May_1998_from_the_Mediterranean_Alboran_Sea_[36.0_N/4.25_W] Mediterranean Sea marine 36 -4.25 Diversification and spectral tuning in marine proteorhodopsins Man,D., Wang,W., Sabehi,G., Aravind,L., Post,A.F., Massana,R., Spudich,E.N., Spudich,J.L. and Beja,O. EMBO J. 22 (8), 17251731 (2003) 12682005 PCR amplified from plankton DNA extracts ATGGGTAAATTATTACTGATATTAGGTAGTGTTATCGCGCTTCCAACATTTGCTGCTGGCGGTGGCGATCTTGATGCTAGTGACTACACTGGTGTTTCATTCTGGTTAGTTACTGCTGCTCTATTAGCGTCTACTGTATTCTTCTTTGTTGAAAGAGATAGAGTGTCTGCAAAATGGAAAACTTCATTAACAGTATCTGGTTTAGTTACTGGTATTGCTTTTTGGCATTATATGTACATGAGAGGTGTATGGATAGAAACTGGTGATTCGCCTACTGTCTTTAGATACATCGACTGGTTATTAACTGTGCCTTTACTAATATGTGAGTTCTATCTGATACTTGCTGCAGCTACTAATGTTGCTGGTTCATTATTTAAGAAATTGCTAGTTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATAATGGCAGCTTGGCCTGCATTCATCATTGGATGTTTAGCATGGGTATATATGATTTATGAACTATGGGCTGGTGAAGGAAAATCTGCATGCAATACTGCAAGTCCTGCTGTACAGTCAGCTTACAACACAATGATGTATATCATCATCGTTGGTTGGGCAATTTATCCTGTAGGTTATTTCACAGGTTACCTAATGGGTGACGGTGGATCAGCTCTTAATCTAAACCTTATTTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAAAATCTTCTAATGCT MGKLLLILGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIVGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKKSSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAATTATTACTGATATTAGGTAGTGTTATCGCGCTTCCAACATTTGCTGCT------GGCGGTGGCGATCTTGATGCTAGTGACTACACTGGTGTTTCATTCTGGTTAGTTACTGCTGCTCTATTAGCGTCTACTGTATTCTTCTTTGTTGAAAGAGATAGAGTGTCTGCA---AAATGGAAAACTTCATTAACAGTATCTGGTTTAGTTACTGGTATTGCTTTTTGGCATTATATGTACATGAGAGGTGTATGGATA------------------------------GAA---------------------ACTGGTGATTCGCCTACTGTCTTTAGATACATCGACTGG------------------------TTATTAACTGTGCCTTTACTAATATGTGAGTTCTATCTGATACTTGCTGCA---------GCT---ACTAATGTTGCTGGT---TCATTA------------------------------------TTTAAGAAA---TTGCTAGTTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATA---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATCATTGGATGTTTAGCATGGGTATATATGATTTATGAACTA---------------TGG------GCT---GGTGAA---GGAAAATCTGCATGCAAT------ACT---GCAAGTCCTGCTGTA---CAG---TCA---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCGTT---------------------------------------------------------------GGTTGG---------GCAATTTATCCTGTAGGTTATTTCACAGGTTACCTAATG------------------------------------GGTGACGGTGGATCAGCTCTTAATCTAAACCTTATTTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAAAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MGKLLLILGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIV---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKK-SSNA------------------------------------- [IV-Gamma5-SAR86c]_EF107104 [IV-Gamma5-SAR86c] EB80_02D08_genomic_EF107104 gi|119713304|gb|EF107104| Uncultured marine bacterium EB80 02D08 genomic sequence Uncultured marine bacterium EB80 02D08 genomic sequence EF107104 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:415441 genomic_DNA other 16-nov-07 #na coastal_ocean/Monterey_Bay/80m_below_sea_surface Pacific Ocean marine 36.8 -122 Proteorhodopsin photosystem gene clusters exhibit coevolutionary trends and shared ancestry among diverse marine microbial phyla McCarren,J. and DeLong,E.F. Environ. Microbiol. 9 (4), 846858 (2007) 17359257 metagenomic ATGAAATTATTACTAATATTGGGTAGTGTTATCGCGCTTCCAACATTTGCTGCTGGCGGTGGCGATCTTGATGCTAGTGACTACACTGGTGTTTCATTCTGGTTAGTTACTGCTGCTCTATTAGCGTCTACTGTATTCTTCTTTGTTGAAAGAGATAGAGTGTCTGCAAAATGGAAAACTTCATTAACAGTATCTGGTTTAGTTACTGGTATTGCTTTTTGGCATTATATGTACATGAGAGGTGTATGGATAGAAACAGGTGATTCACCTACTGTCTTTAGATACATCGACTGGTTATTAACTGTGCCTTTACTAATATGTGAGTTCTATCTAATACTTGCTGCAGCTACTAATGTTGCTGGTTCATTATTTAAGAAATTGCTAGTTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATAATGGCGGCTTGGCCTGCATTCATCATTGGATGTTTAGCATGGGTATATATGATTTATGAACTATGGGCTGGTGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTACAGTCAGCTTACAACACAATGATGTATATCATCATCGTTGGTTGGGCAATTTATCCTGTAGGTTATTTCACAGGTTACCTAATGGGTGACGGTGGATCAGCTCTTAATCTAAACCTTATTTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCC MKLLLILGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIVGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAATTATTACTAATATTGGGTAGTGTTATCGCGCTTCCAACATTTGCTGCT------GGCGGTGGCGATCTTGATGCTAGTGACTACACTGGTGTTTCATTCTGGTTAGTTACTGCTGCTCTATTAGCGTCTACTGTATTCTTCTTTGTTGAAAGAGATAGAGTGTCTGCA---AAATGGAAAACTTCATTAACAGTATCTGGTTTAGTTACTGGTATTGCTTTTTGGCATTATATGTACATGAGAGGTGTATGGATA------------------------------GAA---------------------ACAGGTGATTCACCTACTGTCTTTAGATACATCGACTGG------------------------TTATTAACTGTGCCTTTACTAATATGTGAGTTCTATCTAATACTTGCTGCA---------GCT---ACTAATGTTGCTGGT---TCATTA------------------------------------TTTAAGAAA---TTGCTAGTTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATA---------------------------------ATG------------------------------------------------------------------GCGGCT------------------TGGCCTGCA---TTCATCATTGGATGTTTAGCATGGGTATATATGATTTATGAACTA---------------TGG------GCT---GGTGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTA---CAG---TCA---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCGTT---------------------------------------------------------------GGTTGG---------GCAATTTATCCTGTAGGTTATTTCACAGGTTACCTAATG------------------------------------GGTGACGGTGGATCAGCTCTTAATCTAAACCTTATTTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCC--------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------MKLLLILGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIV---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_KJ926143 [IV-Gamma5-SAR86c] BOUM_OTU056_env_samples gb|KJ926143| Uncultured bacterium clone BOUM OTU056 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU056 putative proteorhodopsin gene, partial cds KJ926143 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 38.96217 14.32367 #na #na #na #na #na GTAGATTGGTTACTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTTGCAGCAGCTACTAACGTTGCTGGTTCTTTATTTAAGAAATTGCTACTTGGTTCTCTTGTAATGCTTGTGTTTGGGTACTTAGGTGAGGCTAGCCTCTTAAATGCATGGATTGCATTCTTAGTTGGTTGTGCTGCATGGGTATACATGATTTATATACTATGGGCTGGAGAAGGAAAGTCTGCATGTAACACTGCAAGTCCTGCAGTTCAGTCAGCTTACAACACAATGATGTATATCATCATCTTTGGCTGGGCTATTTAC VDWLLTVPLLICEFYLILAAATNVAGSLFKKLLLGSLVMLVFGYLGEASLLNAWIAFLVGCAAWVYMIYILWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGATTGG------------------------TTACTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTTGCAGCA---------GCT---ACTAACGTTGCTGGT---TCTTTA------------------------------------TTTAAGAAA---TTGCTACTTGGTTCTCTTGTAATGCTTGTGTTTGGGTACTTAGGTGAG---------GCT------------------AGC------CTC---------------------------------TTA------------------------------------------------------------------AATGCA------------------TGGATTGCA---TTCTTAGTTGGTTGTGCTGCATGGGTATACATGATTTATATACTA---------------TGG------GCT---GGAGAA---GGAAAGTCTGCATGTAAC------ACT---GCAAGTCCTGCAGTT---CAG---TCA---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCTTT---------------------------------------------------------------GGCTGG---------GCTATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLLGSLVMLVFGYLGE---A------S--L-----------L----------------------NA------WIA-FLVGCAAWVYMIYIL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_AY250718 [IV-Gamma5-SAR86c] clone_medA15r8ex6_partial_AY250718 gi|29470233|gb|AY250718| Uncultured bacterium clone medA15r8ex6 proteorhodopsin gene, partial cds Uncultured bacterium clone medA15r8ex6 proteorhodopsin gene, partial cds AY250718 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 20-Apr-2004 #na collected_from_a_depth_of_5_m_at_a_station_in_the_Alboran_Sea_[30_N/4.25_W]_in_May_1998 Mediterranean Sea marine 36 -4.25 Novel Proteorhodopsin variants from the Mediterranean and Red Seas Sabehi,G., Massana,R., Bielawski,J.P., Rosenberg,M., Delong,E.F. and Beja,O. Environ. Microbiol. 5 (10), 842849 (2003) 14510837 PCR amplified from plankton DNA extracts ATGGGTAAATTATTAGTGATGTTAGGTAGTGTTATTGCGCTTCCAACATTTGCCGCTGGTGGTGGTGACCTGGATGCTAGTGACTACACTGGTGTATCTTTCTGGTTAGTTACTGCTGCTCTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGACAGAGTTTCTGCTAAATGGAAAACATCATTAACAGTATCTGGTTTAGTTACTGGTATTGCTTTTTGGCATTACATGTACATGAGAGGTGTATGGATTGAAACTGGTGATTCACCAACTGTTTTTAGATACATCGACTGGTTGCTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTAGCAGCAGCTACTAACGTTGCTGGTTCTTTATTCAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATTATGGCAGCCTGGCCTGCATTCATTATAGGATGTTTAGCATGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAGTCTGCATGTAACACTGCAAGTCCTGCAGTTCAGTCAGCTTACAACACAATGATGTATATCATCATCTTTGGTTGGGCTATTTACCCTGTAGGTTATTTCACTGGTTACCTAATGGGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCT MGKLLVMLGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAATTATTAGTGATGTTAGGTAGTGTTATTGCGCTTCCAACATTTGCCGCT------GGTGGTGGTGACCTGGATGCTAGTGACTACACTGGTGTATCTTTCTGGTTAGTTACTGCTGCTCTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGACAGAGTTTCTGCT---AAATGGAAAACATCATTAACAGTATCTGGTTTAGTTACTGGTATTGCTTTTTGGCATTACATGTACATGAGAGGTGTATGGATT------------------------------GAA---------------------ACTGGTGATTCACCAACTGTTTTTAGATACATCGACTGG------------------------TTGCTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTAGCAGCA---------GCT---ACTAACGTTGCTGGT---TCTTTA------------------------------------TTCAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------GCAGCC------------------TGGCCTGCA---TTCATTATAGGATGTTTAGCATGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAGTCTGCATGTAAC------ACT---GCAAGTCCTGCAGTT---CAG---TCA---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCTTT---------------------------------------------------------------GGTTGG---------GCTATTTACCCTGTAGGTTATTTCACTGGTTACCTAATG------------------------------------GGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MGKLLVMLGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_AY210919 [IV-Gamma5-SAR86c] clone_REDr6a5a6_partial_AY210919 gi|27804300|gb|AY210919| Uncultured bacterium clone REDr6a5a6 proteorhodopsin gene, partial cds Uncultured bacterium clone REDr6a5a6 proteorhodopsin gene, partial cds AY210919 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (V105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 30APR2004 #na collected_on_February_1999_from_a_station_in_the_northern_Red_Sea/near_the_entrance_to_the_Gulf_of_Suez_[27.17_N/34.22_E] Red Sea marine 27.17 34.22 Diversification and spectral tuning in marine proteorhodopsins Man,D., Wang,W., Sabehi,G., Aravind,L., Post,A.F., Massana,R., Spudich,E.N., Spudich,J.L. and Beja,O. EMBO J. 22 (8), 17251731 (2003) 12682005 PCR amplified from plankton DNA extracts ATGGGTAAATTATTACTGATCTTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCAGGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGAAACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTAGTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAACTAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACGATGATGTATATTATCATCTTTGGTTGGGCGATTTATCCTGTAGGTTATTTCACAGGTTACCTGATGGGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCT MGKLLLILGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLVICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAATTATTACTGATCTTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCA------GGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT------------------------------GAA---------------------ACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTAGTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA---ACTAATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACGATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTATCCTGTAGGTTATTTCACAGGTTACCTGATG------------------------------------GGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MGKLLLILGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLVICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_1105129204684 [IV-Gamma5-SAR86c] JCVI_ORF_1105129204684_GS004_Coastal_2m jcvi|1105129204684| 1105129204684 JCVI ORF 1105129204684 1105129204684 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 22-AUG-2003 Coastal/2m_depth/S_28.3_psu/GS004/Outside_Halifax/Nova_Scotia/North_American_East_Coast Atlantic Ocean marine 44.137222 -63.644444 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TTGGCAGCCTGGAGGGGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTCTTTTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGAAACTGGTGACTCACCAACTGTATTTAGATACATTGACTGGTTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAACTAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAGGCAGGAATTATGGCAGCTTGGCCTGCATTCATTATTGGATGTTTAGCTTGGGTATACATGATTTATGAACTATGGGCTGGAGAAGGAAAATCTGCTTGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATCATCATCTTTGGTTGGGCGATTTATCCTGTAGGTTATTTCACAGGTTACCTAATGGGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCT LAAWRGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGCAGCCTGGAGGGGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTCTTTTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT------------------------------GAA---------------------ACTGGTGACTCACCAACTGTATTTAGATACATTGACTGG------------------------TTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA---ACTAATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAG---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATTATTGGATGTTTAGCTTGGGTATACATGATTTATGAACTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCTTGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTATCCTGTAGGTTATTTCACAGGTTACCTAATG------------------------------------GGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------LAAWRGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_EU916099 [IV-Gamma5-SAR86c] clone_BH23-12_EU916099 gi|229359078|gb|EU916099| Uncultured bacterium clone BH23-12 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone BH23-12 putative proteorhodopsin gene, partial cds. EU916099 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATTATCATATTCGGTTGGGCGATA LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCATATTC---------------------------------------------------------------GGTTGG---------GCGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AI---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916103 [IV-Gamma5-SAR86c] clone_BH46-15_EU916103 gi|229359086|gb|EU916103| Uncultured bacterium clone BH46-15 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone BH46-15 putative proteorhodopsin gene, partial cds. EU916103 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATTATCATATTAGGTTGGGCGATA LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIILGWAI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCATATTA---------------------------------------------------------------GGTTGG---------GCGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIL---------------------GW---AI---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916039 [IV-Gamma5-SAR86c] clone_UM7-12_EU916039 gi|229358959|gb|EU916039| Uncultured bacterium clone UM7-12 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone UM7-12 putative proteorhodopsin gene, partial cds. EU916039 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGCGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGGGAAGGAAAATCTGCATGTAATACTGCAGGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATTATCATATTCGGTTGGGCGATA LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTAGPAVQSAYNTMMYIIIFGWAI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGCGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGGGAA---GGAAAATCTGCATGTAAT------ACT---GCAGGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCATATTC---------------------------------------------------------------GGTTGG---------GCGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-AGPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AI---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916042 [IV-Gamma5-SAR86c] clone_UM7-18_EU916042 gi|229358965|gb|EU916042| Uncultured bacterium clone UM7-18 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone UM7-18 putative proteorhodopsin gene, partial cds. EU916042 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCCTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATTATCATTTTCGGTTGGGCAATA LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLVGSPVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCCTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCATTTTC---------------------------------------------------------------GGTTGG---------GCAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLVGSPVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AI---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916052 [IV-Gamma5-SAR86c] clone_UM7-43_EU916052 gi|229358985|gb|EU916052| Uncultured bacterium clone UM7-43 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone UM7-43 putative proteorhodopsin gene, partial cds. EU916052 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATTATCATTTTTGGTTGGGCA LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCATTTTT---------------------------------------------------------------GGTTGG---------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916034 [IV-Gamma5-SAR86c] clone_M7-1_EU916034 gi|229358949|gb|EU916034| Uncultured bacterium clone M7-1 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone M7-1 putative proteorhodopsin gene, partial cds. EU916034 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTACTGTGCCATCAGCTTACAACACAATGATGTATATTATCATCGTTGGATGGGCT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPTVPSAYNTMMYIIIVGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTACTGTG---CCA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCATCGTT---------------------------------------------------------------GGATGG---------GCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPTV-P-S-A-Y-N-TM-MYIIIV---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916035 [IV-Gamma5-SAR86c] clone_M7-2_EU916035 gi|229358951|gb|EU916035| Uncultured bacterium clone M7-2 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone M7-2 putative proteorhodopsin gene, partial cds. EU916035 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATTATCATTGTTGGATGGGCAATA LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIVGWAI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCATTGTT---------------------------------------------------------------GGATGG---------GCAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIV---------------------GW---AI---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916104 [IV-Gamma5-SAR86c] clone_BH46-26_EU916104 gi|229359088|gb|EU916104| Uncultured bacterium clone BH46-26 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone BH46-26 putative proteorhodopsin gene, partial cds. EU916104 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGACAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCAGGAGAAGGAAAGTCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATTATCATCGTCGGTTGGGCA LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIVGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGACAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCA---GGAGAA---GGAAAGTCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCATCGTC---------------------------------------------------------------GGTTGG---------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIV---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916053 [IV-Gamma5-SAR86c] clone_UM7-45_EU916053 gi|229358987|gb|EU916053| Uncultured bacterium clone UM7-45 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone UM7-45 putative proteorhodopsin gene, partial cds. EU916053 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAAATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTATTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATATATATTATCATCGTCGGTTGGGCA LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFKYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLVGSLIMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMIYIIIVGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAAATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTATTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATATATATTATCATCGTC---------------------------------------------------------------GGTTGG---------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFKYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLVGSLIMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-IYIIIV---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916102 [IV-Gamma5-SAR86c] clone_BH46-9_EU916102 gi|229359084|gb|EU916102| Uncultured bacterium clone BH46-9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone BH46-9 putative proteorhodopsin gene, partial cds. EU916102 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCGCTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGACTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATTATCATCTTTGGTTGGGCTATA LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMTYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCGCTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGACTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMTYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AI---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916050 [IV-Gamma5-SAR86c] clone_UM7-40_EU916050 gi|229358981|gb|EU916050| Uncultured bacterium clone UM7-40 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone UM7-40 putative proteorhodopsin gene, partial cds. EU916050 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATTATCATCTTCGGATGGGCT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCATCTTC---------------------------------------------------------------GGATGG---------GCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916041 [IV-Gamma5-SAR86c] clone_UM7-15_EU916041 gi|229358963|gb|EU916041| Uncultured bacterium clone UM7-15 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone UM7-15 putative proteorhodopsin gene, partial cds. EU916041 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATTATCATCTTCGGTTGGGCT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCATCTTC---------------------------------------------------------------GGTTGG---------GCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916096 [IV-Gamma5-SAR86c] clone_BH23-31_EU916096 gi|229359072|gb|EU916096| Uncultured bacterium clone BH23-31 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone BH23-31 putative proteorhodopsin gene, partial cds. EU916096 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAGTTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATTATCGTTTTCGGTTGGGCA LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICEFYLVLAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIVFGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAGTTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCGTTTTC---------------------------------------------------------------GGTTGG---------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICEFYLVLAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIVF---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916032 [IV-Gamma5-SAR86c] clone_UM7-48_EU916032 gi|229358945|gb|EU916032| Uncultured bacterium clone UM7-48 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone UM7-48 putative proteorhodopsin gene, partial cds. EU916032 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGATGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATTATCGTCTTAGGTTGGGCAATA LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLVGSLVMLVFGYMDEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIVLGWAI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGATGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCGTCTTA---------------------------------------------------------------GGTTGG---------GCAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMDE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIVL---------------------GW---AI---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916038 [IV-Gamma5-SAR86c] clone_UM7-11_EU916038 gi|229358957|gb|EU916038| Uncultured bacterium clone UM7-11 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone UM7-11 putative proteorhodopsin gene, partial cds. EU916038 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATTATCATAGTCGGATGGGCG LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICESYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIVGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATCCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCATAGTC---------------------------------------------------------------GGATGG---------GCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICESYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIV---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916044 [IV-Gamma5-SAR86c] clone_UM7-24_EU916044 gi|229358969|gb|EU916044| Uncultured bacterium clone UM7-24 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone UM7-24 putative proteorhodopsin gene, partial cds. EU916044 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATACTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATTGTTATCGTCGGATGGGCGATA LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLVGSLVILVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIVIVGWAI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATACTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTGTTATCGTC---------------------------------------------------------------GGATGG---------GCGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLVGSLVILVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIVIV---------------------GW---AI---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916043 [IV-Gamma5-SAR86c] clone_UM7-22_EU916043 gi|229358967|gb|EU916043| Uncultured bacterium clone UM7-22 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone UM7-22 putative proteorhodopsin gene, partial cds. EU916043 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCACTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTGCTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATATATATTATCATCTTCGGATGGGCGATA LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMIYIIIFGWAI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCACTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTGCTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATATATATTATCATCTTC---------------------------------------------------------------GGATGG---------GCGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-IYIIIF---------------------GW---AI---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916045 [IV-Gamma5-SAR86c] clone_UM7-25_EU916045 gi|229358971|gb|EU916045| Uncultured bacterium clone UM7-25 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone UM7-25 putative proteorhodopsin gene, partial cds. EU916045 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCCTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAATAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAAGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATTATCATCTTAGGTTGGGCGATA LASTVFFLVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFNKLLVGSLVMLVFGYMGEARIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIILGWAI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCCTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAATAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------AGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCATCTTA---------------------------------------------------------------GGTTGG---------GCGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFLVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FNK-LLVGSLVMLVFGYMGE---A------R--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIL---------------------GW---AI---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_JN648725 [IV-Gamma5-SAR86c] 21_A2_MIX1_MIX1_2010_env_samples_JN648725 gi|356818556|gb|JN648725| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648725 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na TTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAACTAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATTATCATCTTT LLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA---ACTAATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCATCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_AF279106 [IV-Gamma5-SAR86c] marine_Gammaproteobacterium_EBAC31A08_AF279106 gi|34112904|gb|AF279106| Uncultured marine gamma proteobacterium EBAC31A08 BAC sequence Uncultured marine gamma proteobacterium EBAC31A08 BAC sequence AF279106 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Gammaproteobacteria/environmental samples] taxon:133804 genomic_DNA other 15-nov-07 #na seawater Pacific Ocean marine 36.8 -122 Bacterial rhodopsin: evidence for a new type of phototrophy in the sea Beja,O., Aravind,L., Koonin,E.V., Suzuki,M.T., Hadd,A., Nguyen,L.P., Jovanovich,S.B., Gates,C.M., Feldman,R.A., Spudich,J.L., Spudich,E.N. and DeLong,E.F. Science 289 (5486), 19021906 (2000) 10988064 metagenomic ATGAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCAGGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGAAACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAACTAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTATCCTGTAGGTTATTTCACAGGTTACCTGATGGGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCT MKLLLILGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCA------GGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT------------------------------GAA---------------------ACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA---ACTAATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTATCCTGTAGGTTATTTCACAGGTTACCTGATG------------------------------------GGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------MKLLLILGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_JN648727 [IV-Gamma5-SAR86c] A_1_MIX3__120_1__G8_Abril2011_D5M13F_env_samples_JN648727 gi|356818560|gb|JN648727| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648727 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na CTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAACTAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATTATCATCTTT LTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA---ACTAATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCATCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_JN648755 [IV-Gamma5-SAR86c] B2_Mayo2011_B2M13F_A5_MIX1_300_98_150_env_samples_JN648755 gi|356818616|gb|JN648755| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648755 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na CTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAACTAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATTATCATCTTT LTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA---ACTAATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCATCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_JN648728 [IV-Gamma5-SAR86c] A2_MIX1_350_24__F10_Abril2011_H2M13F_env_samples_JN648728 gi|356818562|gb|JN648728| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648728 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na CTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAACTAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATTATCATCTTT LTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA---ACTAATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCATCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916015 [IV-Gamma5-SAR86c] clone_4S17-8_EU916015 gi|229358911|gb|EU916015| Uncultured bacterium clone 4S17-8 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 4S17-8 putative proteorhodopsin gene, partial cds. EU916015 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAATCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATTATCATCTTTGGTTGGGCGATTTAT LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTANPAVQSAYNTMMYIIIFGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT---------------------------------------------------------GGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAATCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ANPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_NZ_JH611910 [IV-Gamma5-SAR86c] 402296882_1415_2164_SAR86_cluster_bacterium_SAR86C_Scaff108_WGS gi|402296882|gb|NZ_JH611910| SAR86 cluster bacterium SAR86C genomic scaffold Scaff108, whole genome shotgun sequence SAR86 cluster bacterium SAR86C genomic scaffold Scaff108, whole genome shotgun sequence NZ_JH611910 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Gammaproteobacteria/SAR86 cluster] taxon:1123864 genomic_DNA strain 12-May-2013 09Apr2009 #na Pacific Ocean marine 32.87 -117.26 #na #na #na #na #na ATGAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCAGGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGAAACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCTACTAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCATGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATCATCATCTTTGGTTGGGCGATTTATCCTGTAGGTTATTTCACAGGTTACCTGATGGGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCT MKLLLILGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAATTATTACTGATATTAGGTAGTGTTATTGCACTTCCTACATTTGCTGCA------GGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTTTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT------------------------------GAA---------------------ACTGGTGATTCGCCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTCTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCT---ACTAATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTATCCTGTAGGTTATTTCACAGGTTACCTGATG------------------------------------GGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------MKLLLILGSVIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_1105109412202 [IV-Gamma5-SAR86c] JCVI_ORF_1105109412202_GS002_Coastal_1m jcvi|1105109412202| 1105109412202 JCVI ORF 1105109412202 1105109412202 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 21-AUG-2003 Coastal/1m_depth/S_29.2_psu/GS002/Gulf_of_Maine/North_American_East_Coast Atlantic Ocean marine 42.503056 -67.24 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAATTATTATTAATCTTAGGTAGTGCTATCGCACTTCCTACATTTGCTGCTGGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTCTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGAAACTGGTGACTCACCAACTGTATTTAGATACATTGACTGGTTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAACTAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGATACATGGGTGAGGCAGGAATTATGGCAGCTTGGCCTGCATTCATTATTGGATGTTTAGCTTGGGTATACATGATTTATGAACTATGGGCTGGAGAAGGAAAATCTGCTTGTAACACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATCATCATCTTTGGTTGGGCGATTTATCCTGTAGGTTATTTCACAGGTTACCTAATGGGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATCTGGAATGTTGCAGTTAAAGAATCTAATGCA MKLLLILGSAIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAATTATTATTAATCTTAGGTAGTGCTATCGCACTTCCTACATTTGCTGCT------GGTGGTGGTGACCTTGATGCTAGTGATTACACTGGTGTTTCTTTTTGGTTAGTTACTGCTGCTCTATTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT------------------------------GAA---------------------ACTGGTGACTCACCAACTGTATTTAGATACATTGACTGG------------------------TTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA---ACTAATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGATACATGGGTGAG---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATTATTGGATGTTTAGCTTGGGTATACATGATTTATGAACTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCTTGTAAC------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTATCCTGTAGGTTATTTCACAGGTTACCTAATG------------------------------------GGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATCTGGAATGTTGCAGTTAAAGAA---TCTAATGCA------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------MKLLLILGSAIALPTFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SNA-------------------------------------- [IV-Gamma5-SAR86c]_1105157873233 [IV-Gamma5-SAR86c] JCVI_ORF_1105157873233 jcvi|1105157873233| 1105157873233 JCVI ORF 1105157873233 1105157873233 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 21-AUG-2003 Coastal/1m_depth/S_29.9_psu/GS003/Browns_Bank/Gulf_of_Maine/North_American_East_Coast Atlantic Ocean marine 42.85278 -66.217224 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATTGAAACTGGTGACTCACCAACTGTATTTAGATACATTGACTGGTTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAACTAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAGGCAGGAATTATGGCAGCTTGGCCTGCATTCATTATTGGATGTTTAGCTTGGGTATACATGATTTATGAACTATGGGCTGGAGAAGGAAAATCTGCTTGTAACACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATCATCATCTTTGGTTGGGCGATTTATCCTGTAGGTTATTTCACAGGTTACCTAATGGGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAATCTTCTAATGCT IAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGCTTTCTGGCATTACATGTACATGAGAGGGGTATGGATT------------------------------GAA---------------------ACTGGTGACTCACCAACTGTATTTAGATACATTGACTGG------------------------TTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA---ACTAATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAG---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATTATTGGATGTTTAGCTTGGGTATACATGATTTATGAACTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCTTGTAAC------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCTTT---------------------------------------------------------------GGTTGG---------GCGATTTATCCTGTAGGTTATTTCACAGGTTACCTAATG------------------------------------GGTGACGGTGGATCAGCTCTTAACTTAAACCTTATCTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATATGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------IAFWHYMYMRGVWI----------E-------TGDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_EU916122 [IV-Gamma5-SAR86c] clone_UDXM-24_EU916122 gi|229359119|gb|EU916122| Uncultured bacterium clone UDXM-24 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone UDXM-24 putative proteorhodopsin gene, partial cds. EU916122 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCAACAGTTTTCTTCTTTATTGAAAGAGATAGAGTTGCTGCTAAATGGAAAACGTCATTAACAGTATCTGGACTAGTTACAGGTATTGCTTTCTGGCACTACTTATACATGAGAGGTGTATGGGTTGGTGAGTCACCAACAGTATTTAGATATATTGACTGGTTACTAACAGTACCTTTATTAATATGTGAGTTCTATTTAATACTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAAAAGCTTCTCATAGGTTCACTAGTTATGCTTGTATTCGGGTATATGGGTGAAGCTGGAATCATGGCTGCATGGCCTGCATTCATTATCGGGTGTTTAGCTTGGTTCTATATGATCTATGAATTGTGGGCTGGAGAAGGTAAATCAGCTTGCAATACTGCAAGTCCAGCTGTTCAATCAGCATACAACACAATGATGTACATTATCATATTTGGATGGGCAATA LASTVFFFIERDRVAAKWKTSLTVSGLVTGIAFWHYLYMRGVWVGESPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLIGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWFYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCAACAGTTTTCTTCTTTATTGAAAGAGATAGAGTTGCTGCT---AAATGGAAAACGTCATTAACAGTATCTGGACTAGTTACAGGTATTGCTTTCTGGCACTACTTATACATGAGAGGTGTATGGGTT---------------------------------------------------------GGTGAGTCACCAACAGTATTTAGATATATTGACTGG------------------------TTACTAACAGTACCTTTATTAATATGTGAGTTCTATTTAATACTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAAAAG---CTTCTCATAGGTTCACTAGTTATGCTTGTATTCGGGTATATGGGTGAA---------GCT------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATCGGGTGTTTAGCTTGGTTCTATATGATCTATGAATTG---------------TGG------GCT---GGAGAA---GGTAAATCAGCTTGCAAT------ACT---GCAAGTCCAGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGTACATTATCATATTT---------------------------------------------------------------GGATGG---------GCAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFIERDRVAA-KWKTSLTVSGLVTGIAFWHYLYMRGVWV-------------------GESPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWFYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AI---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916124 [IV-Gamma5-SAR86c] clone_UDXM-32_EU916124 gi|229359123|gb|EU916124| Uncultured bacterium clone UDXM-32 putative proteorhodopsin-like gene, partial sequence. Uncultured bacterium clone UDXM-32 putative proteorhodopsin-like gene, partial sequence. EU916124 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na GGTGACCTTGATGCAGGTGACACTACTGGTGTTAGTTTCTGGTTGGTTACCGCAGCTTTATTAGCATCAACAGTTTTCTTCTTTATTGAAAGAGATAGAGTTGCTGCTAAATGGAAAACGTCATTAACAGTATCTGGACTAGTTACAGGTATTGCTTTCTGGCACTACTTATACATGAGAGGTGTATGGGTTGAGACAGGTGAGTCACCAACAGTATTTAGATATATTGACTGGTTACTAACAGTACCTTTATTAATATGTGAGTTCTATTTAATACTTGCTGCTGCAACAAATGTTGCTGGATCATTATTTAAAAAGCTTCTCATAGGTTCACTAGTTATGCTTGTATTCGGGTATATGGGTGAAGCTGGAATCATGGCTGCATGGCCTGCATTCATTATCGGGTGTTTAGCTTGGTTCTATATGATCTATGAATTGTGGGCTGGAGAAGGTAAATCAGCTTGCAATACTGCAAGTCCAGCTGTTCAATCAGCATACAATCGTCGACCTGCAGGCATG GDLDAGDTTGVSFWLVTAALLASTVFFFIERDRVAAKWKTSLTVSGLVTGIAFWHYLYMRGVWVETGESPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLIGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWFYMIYELWAGEGKSACNTASPAVQSAYNRRPAGM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGACCTTGATGCAGGTGACACTACTGGTGTTAGTTTCTGGTTGGTTACCGCAGCTTTATTAGCATCAACAGTTTTCTTCTTTATTGAAAGAGATAGAGTTGCTGCT---AAATGGAAAACGTCATTAACAGTATCTGGACTAGTTACAGGTATTGCTTTCTGGCACTACTTATACATGAGAGGTGTATGGGTT------------------------------GAG---------------------ACAGGTGAGTCACCAACAGTATTTAGATATATTGACTGG------------------------TTACTAACAGTACCTTTATTAATATGTGAGTTCTATTTAATACTTGCTGCT---------GCA---ACAAATGTTGCTGGA---TCATTA------------------------------------TTTAAAAAG---CTTCTCATAGGTTCACTAGTTATGCTTGTATTCGGGTATATGGGTGAA---------GCT------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATCGGGTGTTTAGCTTGGTTCTATATGATCTATGAATTG---------------TGG------GCT---GGAGAA---GGTAAATCAGCTTGCAAT------ACT---GCAAGTCCAGCTGTT---CAA---TCA---GCA---TAC---AAT---CGTCGA------------------------------------------------------------------------------------------------------------CCTGCAGGCATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------GDLDAGDTTGVSFWLVTAALLASTVFFFIERDRVAA-KWKTSLTVSGLVTGIAFWHYLYMRGVWV----------E-------TGESPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWFYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-RR------------------------------------PAGM----------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916002 [IV-Gamma5-SAR86c] clone_4S3-36_EU916002 gi|229358885|gb|EU916002| Uncultured bacterium clone 4S3-36 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 4S3-36 putative proteorhodopsin gene, partial cds. EU916002 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCAACAGTTTTCTTCTTTATTGAAAGAGATAGAGTTGCTGCTAAATGGAAAACGTCATTAACAGTATCTGGACTAGTTACAGGTATTGCTTTCTGGCACTACTTATACATGAGAGGTGTATGGGTTGGTGAGTCACCAACAGTATTTAGATATATTGACTGGTTACTAACAGTACCTTTATTAATATGTGAGTTCTATTTAATACTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAAAAGCTTCTCATAGGTTCACTAGTTATGCTTGTATTCGGGTATATGGGTGAAGCTGGAATCATGGCTGCATGGCCTGCATTCATTATCGGGTGTTTAGCTTGGTTCTATATGATCTATGAATTGTGGGCTGGAGAAGGTAAATCAGCTTGCAATACTGCAAGTCCAGCTGTTCAATCAGCATACAACACAATGATGTACATTATCATATTTGGATGGGCAATA LASTVFFFIERDRVAAKWKTSLTVSGLVTGIAFWHYLYMRGVWVGESPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLIGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWFYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCAACAGTTTTCTTCTTTATTGAAAGAGATAGAGTTGCTGCT---AAATGGAAAACGTCATTAACAGTATCTGGACTAGTTACAGGTATTGCTTTCTGGCACTACTTATACATGAGAGGTGTATGGGTT---------------------------------------------------------GGTGAGTCACCAACAGTATTTAGATATATTGACTGG------------------------TTACTAACAGTACCTTTATTAATATGTGAGTTCTATTTAATACTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAAAAG---CTTCTCATAGGTTCACTAGTTATGCTTGTATTCGGGTATATGGGTGAA---------GCT------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATCGGGTGTTTAGCTTGGTTCTATATGATCTATGAATTG---------------TGG------GCT---GGAGAA---GGTAAATCAGCTTGCAAT------ACT---GCAAGTCCAGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGTACATTATCATATTT---------------------------------------------------------------GGATGG---------GCAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFIERDRVAA-KWKTSLTVSGLVTGIAFWHYLYMRGVWV-------------------GESPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWFYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AI---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916000 [IV-Gamma5-SAR86c] clone_4S3-37_EU916000 gi|229358881|gb|EU916000| Uncultured bacterium clone 4S3-37 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 4S3-37 putative proteorhodopsin gene, partial cds. EU916000 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCAACAGTTTTCTTCTTTATTGAAAGAGATAGAGTTGCTGCTAAATGGAAAACGTCATTAACAGTATCTGGACTAGTTACAGGTATTGCTTTCTGGCACTACTTATACATGAGAGGTGTATGGGTTGGTGAGTCACCAACAGTATTTAGATATATTGACTGGTTACTAACAGTACCTTTATTAATATGTGAGTTCTATTTAATACTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAAAAGCTTCTCATAGGTTCACTAGTTATGCTTGTATTCGGGTATATGGGTGAAGCTGGAATCATGGCTGCATGGCCTGCATTCATTATCGGGTGTTTAGCTTGGTTCTATATGATCTATGAATTGTGGGCTGGAGAAGGTAAATCAGCTTGCAATACTGCAAGTCCAGCTGTTCAATCAGCATACAACACAATGATGTACATTATCATATTTGGATGGGCAATA LASTVFFFIERDRVAAKWKTSLTVSGLVTGIAFWHYLYMRGVWVGESPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLIGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWFYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCAACAGTTTTCTTCTTTATTGAAAGAGATAGAGTTGCTGCT---AAATGGAAAACGTCATTAACAGTATCTGGACTAGTTACAGGTATTGCTTTCTGGCACTACTTATACATGAGAGGTGTATGGGTT---------------------------------------------------------GGTGAGTCACCAACAGTATTTAGATATATTGACTGG------------------------TTACTAACAGTACCTTTATTAATATGTGAGTTCTATTTAATACTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAAAAG---CTTCTCATAGGTTCACTAGTTATGCTTGTATTCGGGTATATGGGTGAA---------GCT------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATCGGGTGTTTAGCTTGGTTCTATATGATCTATGAATTG---------------TGG------GCT---GGAGAA---GGTAAATCAGCTTGCAAT------ACT---GCAAGTCCAGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGTACATTATCATATTT---------------------------------------------------------------GGATGG---------GCAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFIERDRVAA-KWKTSLTVSGLVTGIAFWHYLYMRGVWV-------------------GESPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWFYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AI---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916127 [IV-Gamma5-SAR86c] clone_UDXM-43_EU916127 gi|229359128|gb|EU916127| Uncultured bacterium clone UDXM-43 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone UDXM-43 putative proteorhodopsin gene, partial cds. EU916127 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCAACAGTTTTCTTCTTTATTGAAAGAGATAGAGTTGCTGCTAAATGGAAAACGTCATTAACAGTATCTGGACTAGTTACAGGTATTGCTTTCTGGCACTACTTATACATGAGAGGTGTATGGGTTGGTGAGTCACCAACAGTATTTAGATATATTGACTGGTTACTAACAGTACCTTTATTAATATGTGAGTTCTATTTAATACTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAAAAGCTTCTCATAGGTTCACTAGTTATGCTTGTATTCGGGTATATGGGTGAAGCTGGAATCATGGCTGCATGGCCTGCATTCATTATCGGGTGTTTAGCTTGGTTCTATATGATCTATGAATTGTGGGCTGGAGAAGGTAAATCAGCTTGCAATACTGCAAGTCCAGCTGTTCAATCAGCATACAACACAATGATGTACATTATCGTATTCGGATGGGCA LASTVFFFIERDRVAAKWKTSLTVSGLVTGIAFWHYLYMRGVWVGESPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLIGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWFYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIVFGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCAACAGTTTTCTTCTTTATTGAAAGAGATAGAGTTGCTGCT---AAATGGAAAACGTCATTAACAGTATCTGGACTAGTTACAGGTATTGCTTTCTGGCACTACTTATACATGAGAGGTGTATGGGTT---------------------------------------------------------GGTGAGTCACCAACAGTATTTAGATATATTGACTGG------------------------TTACTAACAGTACCTTTATTAATATGTGAGTTCTATTTAATACTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAAAAG---CTTCTCATAGGTTCACTAGTTATGCTTGTATTCGGGTATATGGGTGAA---------GCT------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATCGGGTGTTTAGCTTGGTTCTATATGATCTATGAATTG---------------TGG------GCT---GGAGAA---GGTAAATCAGCTTGCAAT------ACT---GCAAGTCCAGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGTACATTATCGTATTC---------------------------------------------------------------GGATGG---------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFIERDRVAA-KWKTSLTVSGLVTGIAFWHYLYMRGVWV-------------------GESPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWFYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIVF---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU915972 [IV-Gamma5-SAR86c] clone_H9-16_EU915972 gi|229358825|gb|EU915972| Uncultured bacterium clone H9-16 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone H9-16 putative proteorhodopsin gene, partial cds. EU915972 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCAACAGTTTTCTTCTTTATTGAAAGAGATGGAGTTGCTGCTAAATGGAAAACGTCATTAACAGTATCTGGACTAGTTACAGGTATTGCTTTCTGGCACTACTTATACATGAGAGGTGTATGGGTTGGTGAGTCACCAACAGTATTTAGATATATTGACTGGTTACTAACAGTACCTTTATTAATATGTGAGTTCTATTTAATACTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAAAAGCTTCTCATAGGTTCACTAGTTATGCTTGTATTCGGGTATATGGGTGAAGCTGGAATCATGGCTGCATGGCCTGCATTCATTATCGGGTGTTTAGCTTGGTTCTATATGATCTATGAATTGTGGGCTGGAGAAGGTAAATCAGCTTGCAATACTGCAAGTCCAGCTGTTCAATCAGCATACAACACAATGATGTACATTATCGTATTCGGATGGGCG LASTVFFFIERDGVAAKWKTSLTVSGLVTGIAFWHYLYMRGVWVGESPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLIGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWFYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIVFGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCAACAGTTTTCTTCTTTATTGAAAGAGATGGAGTTGCTGCT---AAATGGAAAACGTCATTAACAGTATCTGGACTAGTTACAGGTATTGCTTTCTGGCACTACTTATACATGAGAGGTGTATGGGTT---------------------------------------------------------GGTGAGTCACCAACAGTATTTAGATATATTGACTGG------------------------TTACTAACAGTACCTTTATTAATATGTGAGTTCTATTTAATACTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAAAAG---CTTCTCATAGGTTCACTAGTTATGCTTGTATTCGGGTATATGGGTGAA---------GCT------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATCGGGTGTTTAGCTTGGTTCTATATGATCTATGAATTG---------------TGG------GCT---GGAGAA---GGTAAATCAGCTTGCAAT------ACT---GCAAGTCCAGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGTACATTATCGTATTC---------------------------------------------------------------GGATGG---------GCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFIERDGVAA-KWKTSLTVSGLVTGIAFWHYLYMRGVWV-------------------GESPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWFYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIVF---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916131 [IV-Gamma5-SAR86c] clone_UDXM-48_EU916131 gi|229359136|gb|EU916131| Uncultured bacterium clone UDXM-48 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone UDXM-48 putative proteorhodopsin gene, partial cds. EU916131 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCAACAGTTTTCTTCTTTATTGAAAGAGATAGTGTTGCTGCTAAATGGAAAACGTCATTAACAGTATCTGGACTAGTTACAGGTATTGCTTTCTGGCACTACTTATACATGAGAGGTGTATGGGTTGGTGAGTCACCAACAGTATTTAGATATATTGACTGGTTACTAACAGTACCTTTATTAATATGTGAGTTCTATTTAATACTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAAAAGCTTCTCATAGGTTCACTAGTTATGCTTGTATTCGGGTATATGGGTGAAGCTGGAATCATGGCTGCATGGCCTGCATTCATTATCGGGTGTTTAGCTTGGTTCTATATGATCTATGAATTGTGGGCTGGAGAAGGTAAATCAGCTTGCAATACTGCAAGTCCAGCTGTTCAATCAGCATACAACACAATGATGTACATTATCATTTTCGGATGGGCG LASTVFFFIERDSVAAKWKTSLTVSGLVTGIAFWHYLYMRGVWVGESPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLIGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWFYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCAACAGTTTTCTTCTTTATTGAAAGAGATAGTGTTGCTGCT---AAATGGAAAACGTCATTAACAGTATCTGGACTAGTTACAGGTATTGCTTTCTGGCACTACTTATACATGAGAGGTGTATGGGTT---------------------------------------------------------GGTGAGTCACCAACAGTATTTAGATATATTGACTGG------------------------TTACTAACAGTACCTTTATTAATATGTGAGTTCTATTTAATACTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAAAAG---CTTCTCATAGGTTCACTAGTTATGCTTGTATTCGGGTATATGGGTGAA---------GCT------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATCGGGTGTTTAGCTTGGTTCTATATGATCTATGAATTG---------------TGG------GCT---GGAGAA---GGTAAATCAGCTTGCAAT------ACT---GCAAGTCCAGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGTACATTATCATTTTC---------------------------------------------------------------GGATGG---------GCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFIERDSVAA-KWKTSLTVSGLVTGIAFWHYLYMRGVWV-------------------GESPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWFYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916117 [IV-Gamma5-SAR86c] clone_UDXM-4_EU916117 gi|229359109|gb|EU916117| Uncultured bacterium clone UDXM-4 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone UDXM-4 putative proteorhodopsin gene, partial cds. EU916117 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCAACAGTTTTCTTCTTTATTGAAAGAGATAGTGTTGCTGCTAAATGGAAAACGTCATTAACAGTATCTGGACTAGTTACAGGTATTGCTTTCTGGCACTACTTATACATGAGAGGTGTATGGGTTGGTGAGTCACCAACAGTATTTAGATATATTGACTGGTTACTAACAGTACCTTTATTAATATGTGAGTTCTATTTAATACTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAAAAGCTTCTCATAGGTTCACTAGTTATGCTTGTATTCGGGTATATGGGTGAAGCTGGAATCATGGCTGCATGGCCTGCATTCATTATCGGGTGTTTAGCTTGGTTCTATATGATCTATGAATTGTGGGCTGGAGAAGGTAAATCAGCTTGCAATACTGCAAGTCCAGCTGTTCAATCAGCATACAACACAATGATGTACATTATCATTTTCGGATGGGCG LASTVFFFIERDSVAAKWKTSLTVSGLVTGIAFWHYLYMRGVWVGESPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLIGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWFYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCAACAGTTTTCTTCTTTATTGAAAGAGATAGTGTTGCTGCT---AAATGGAAAACGTCATTAACAGTATCTGGACTAGTTACAGGTATTGCTTTCTGGCACTACTTATACATGAGAGGTGTATGGGTT---------------------------------------------------------GGTGAGTCACCAACAGTATTTAGATATATTGACTGG------------------------TTACTAACAGTACCTTTATTAATATGTGAGTTCTATTTAATACTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAAAAG---CTTCTCATAGGTTCACTAGTTATGCTTGTATTCGGGTATATGGGTGAA---------GCT------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATCGGGTGTTTAGCTTGGTTCTATATGATCTATGAATTG---------------TGG------GCT---GGAGAA---GGTAAATCAGCTTGCAAT------ACT---GCAAGTCCAGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGTACATTATCATTTTC---------------------------------------------------------------GGATGG---------GCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFIERDSVAA-KWKTSLTVSGLVTGIAFWHYLYMRGVWV-------------------GESPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWFYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU915988 [IV-Gamma5-SAR86c] clone_H8-1_EU915988 gi|229358857|gb|EU915988| Uncultured bacterium clone H8-1 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone H8-1 putative proteorhodopsin gene, partial cds. EU915988 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCAACAGTTTTCTTCTTTATTGAAAGAGATAGAGTTGCTGCTAAATGGAAAACGTCATTAACAGTATCTGGACTAGTTACAGGTATTGCTTTCTGGCACTACTTATACATGAGAGGTGTATGGGTTGGTGAGTCACCAACAGTATTTAGATATATTGACTGGTTACTAACAGTACCTTTATTAATATGTGAGTTCTATTTAATACTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAAAAGCTTCTCATAGGTTCACTAGTTATGCTTGTATTCGGGTATATGGGTGAAGCTGGAATCATGGCTGCATGGCCTGCATTCATTATCGGGTGTTTAGCTTGGTTCTATATGATCTATGAATTGTGGGCTGGAGAAGGTAAATCAGCTTGCAATACTGCAAGTCCAGCTGTTCAATCAGCATACAACACAATGATGTACATTATCGTTTTTGGATGGGCGATA LASTVFFFIERDRVAAKWKTSLTVSGLVTGIAFWHYLYMRGVWVGESPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLIGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWFYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIVFGWAI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCAACAGTTTTCTTCTTTATTGAAAGAGATAGAGTTGCTGCT---AAATGGAAAACGTCATTAACAGTATCTGGACTAGTTACAGGTATTGCTTTCTGGCACTACTTATACATGAGAGGTGTATGGGTT---------------------------------------------------------GGTGAGTCACCAACAGTATTTAGATATATTGACTGG------------------------TTACTAACAGTACCTTTATTAATATGTGAGTTCTATTTAATACTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAAAAG---CTTCTCATAGGTTCACTAGTTATGCTTGTATTCGGGTATATGGGTGAA---------GCT------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATCGGGTGTTTAGCTTGGTTCTATATGATCTATGAATTG---------------TGG------GCT---GGAGAA---GGTAAATCAGCTTGCAAT------ACT---GCAAGTCCAGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGTACATTATCGTTTTT---------------------------------------------------------------GGATGG---------GCGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFIERDRVAA-KWKTSLTVSGLVTGIAFWHYLYMRGVWV-------------------GESPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWFYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIVF---------------------GW---AI---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU915965 [IV-Gamma5-SAR86c] clone_H8-14_EU915965 gi|229358811|gb|EU915965| Uncultured bacterium clone H8-14 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone H8-14 putative proteorhodopsin gene, partial cds. EU915965 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCAACAGTTTTCTTCTTTATTGAAAGAGATAGAGTTGCTGCTAAATGGAAAACGTCATTAACAGTATCTGGACTAGTTACAGGTATTGCTTTCTGGCACTACTTATACATGAGAGGTGTATGGGTTGGTGAGTCACCAACAGTATTTAGATATATTGACTGGTTACTAACAGTACCTTTATTAATATGTGAGTTCTATTTAATACTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAAAAGCTTCTCATAGGTTCACTAGTTATGCTTGTATTCGGGTATATGGGTGAAGCTGGAATCATGGCTGCATGGCCTGCATTCATTATCGGGTGTTTAGCTTGGTTCTATATGATCTATGAATTGTGGGCTGGAGAAGGTAAATCAGCTTGCAATACTGCAAGTCCAGCTGTTCAATCAGCATACAACACAATGATGTACATTATCGTCGTAGGTTGGGCGATA LASTVFFFIERDRVAAKWKTSLTVSGLVTGIAFWHYLYMRGVWVGESPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLIGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWFYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIVVGWAI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCAACAGTTTTCTTCTTTATTGAAAGAGATAGAGTTGCTGCT---AAATGGAAAACGTCATTAACAGTATCTGGACTAGTTACAGGTATTGCTTTCTGGCACTACTTATACATGAGAGGTGTATGGGTT---------------------------------------------------------GGTGAGTCACCAACAGTATTTAGATATATTGACTGG------------------------TTACTAACAGTACCTTTATTAATATGTGAGTTCTATTTAATACTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAAAAG---CTTCTCATAGGTTCACTAGTTATGCTTGTATTCGGGTATATGGGTGAA---------GCT------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATCGGGTGTTTAGCTTGGTTCTATATGATCTATGAATTG---------------TGG------GCT---GGAGAA---GGTAAATCAGCTTGCAAT------ACT---GCAAGTCCAGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGTACATTATCGTCGTA---------------------------------------------------------------GGTTGG---------GCGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFIERDRVAA-KWKTSLTVSGLVTGIAFWHYLYMRGVWV-------------------GESPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWFYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIVV---------------------GW---AI---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916006 [IV-Gamma5-SAR86c] clone_4S3-49_EU916006 gi|229358893|gb|EU916006| Uncultured bacterium clone 4S3-49 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 4S3-49 putative proteorhodopsin gene, partial cds. EU916006 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCATCAACAGTTTTCTCCTTTATTGAAAGAGATAGAGTTGCTGCTAAATGGAAAACGTCATTAACAGTATCTGGACTAGTTACAGGTATTGCTTTCTGGCACTACTTATACATGAGAGGTGTATGGGTTGGTGAGTCACCAACAGTATTTAGATATATTGACTGGTTACTAACAGTACCTTTATTAATATGTGAGTTCTATTTAATACTTGCTGCTGCAAATGTTGCTGGATCATTATTTAAAAAGCTTCTCATAGGTTCACTAGTTATGCTTGTATTCGGGTATATGGGTGAAGCTGGAATCATGGCTGCATGGCCTGCATTCATTATCGGGTGTTTAGCTTGGTTCTATATGATCTATGAATTGTGGGCTGGAGAAGGTAAATCAGCTTGCAATACTGCAAGTCCAGCTGTTCAATCAGCATACAACACAATGATGTACATTATCGTCTTTGGATGGGCT LASTVFSFIERDRVAAKWKTSLTVSGLVTGIAFWHYLYMRGVWVGESPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLIGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWFYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIVFGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCATCAACAGTTTTCTCCTTTATTGAAAGAGATAGAGTTGCTGCT---AAATGGAAAACGTCATTAACAGTATCTGGACTAGTTACAGGTATTGCTTTCTGGCACTACTTATACATGAGAGGTGTATGGGTT---------------------------------------------------------GGTGAGTCACCAACAGTATTTAGATATATTGACTGG------------------------TTACTAACAGTACCTTTATTAATATGTGAGTTCTATTTAATACTTGCTGCT---------GCA------AATGTTGCTGGA---TCATTA------------------------------------TTTAAAAAG---CTTCTCATAGGTTCACTAGTTATGCTTGTATTCGGGTATATGGGTGAA---------GCT------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TGGCCTGCA---TTCATTATCGGGTGTTTAGCTTGGTTCTATATGATCTATGAATTG---------------TGG------GCT---GGAGAA---GGTAAATCAGCTTGCAAT------ACT---GCAAGTCCAGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGTACATTATCGTCTTT---------------------------------------------------------------GGATGG---------GCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFSFIERDRVAA-KWKTSLTVSGLVTGIAFWHYLYMRGVWV-------------------GESPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWFYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIVF---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_1105130383414 [IV-Gamma5-SAR86c] JCVI_ORF_1105130383414 jcvi|1105130383414| 1105130383414 JCVI ORF 1105130383414 1105130383414 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 16-nov-03 Coastal/1m_depth/S_26.5_psu/GS008/Newport_Harbor/RI/North_American_East_Coast Atlantic Ocean marine 41.485832 -71.35111 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TTGGTGACTGCAGCTCTTTTGGCTTCAACTGTATTTTTCTTTATTGAAAGAGACAGAGTTGCTGCTAAGTGGAAGACATCTTTAACAGTATCTGGTCTAGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGTGTTTGGGTTGAAACTGGTGAATCACCAACTGTATTCAGATATATTGACTGGCTACTTACAGTGCCTTTATTAATATGTGAGTTTTATCTGATTCTTGCAGCTGCAACTAATGTTGCTGGTTCTTTATTTAAGAAGCTTTTAGTTGGTTCTCTTGTAATGCTTGTATTTGGTTATATGGGCGAAGCAGGAATTATGGCAGCTTGGCCTGCATTCATTGTTGGATGTTTAGCTTGGTTCTATATGATTTATGAGCTATGGGCTGGAGAAGGAAAATCTGCATGCAATACTGCAAGTCCAGCTGTTCAATCAGCATACAACACAATGATGTATATTATTATCATTGGTTGGGCTATTTATCCTCTTGGGTACTTTACTGGTTACCTAATGGGTGACGGCGGATCAGCCTTAAACTTAAACCTAATTTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATCATATGGCATGTTGCTGTGAAAGAATCATCTAACGCT LVTAALLASTVFFFIERDRVAAKWKTSLTVSGLVTGIAFWHYMYMRGVWVETGESPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIVGCLAWFYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIIGWAIYPLGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWHVAVKESSNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGTGACTGCAGCTCTTTTGGCTTCAACTGTATTTTTCTTTATTGAAAGAGACAGAGTTGCTGCT---AAGTGGAAGACATCTTTAACAGTATCTGGTCTAGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGTGTTTGGGTT------------------------------GAA---------------------ACTGGTGAATCACCAACTGTATTCAGATATATTGACTGG------------------------CTACTTACAGTGCCTTTATTAATATGTGAGTTTTATCTGATTCTTGCAGCT---------GCA---ACTAATGTTGCTGGT---TCTTTA------------------------------------TTTAAGAAG---CTTTTAGTTGGTTCTCTTGTAATGCTTGTATTTGGTTATATGGGCGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATTGTTGGATGTTTAGCTTGGTTCTATATGATTTATGAGCTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGCAAT------ACT---GCAAGTCCAGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGTATATTATTATCATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCTCTTGGGTACTTTACTGGTTACCTAATG------------------------------------GGTGACGGCGGATCAGCCTTAAACTTAAACCTAATTTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATCATATGGCATGTTGCTGTGAAAGAA---TCATCTAACGCT--------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------LVTAALLASTVFFFIERDRVAA-KWKTSLTVSGLVTGIAFWHYMYMRGVWV----------E-------TGESPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIVGCLAWFYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIII---------------------GW---AIYPLGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWHVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_AY250722 [IV-Gamma5-SAR86c] clone_medA15r8b3_partial_AY250722 gi|29470241|gb|AY250722| Uncultured bacterium clone medA15r8b3 proteorhodopsin gene, partial cds Uncultured bacterium clone medA15r8b3 proteorhodopsin gene, partial cds AY250722 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 20-Apr-2004 #na collected_from_a_depth_of_5_m_at_a_station_in_the_Alboran_Sea_[30_N/4.25_W]_in_May_1998 Mediterranean Sea marine 36 -4.25 Novel Proteorhodopsin variants from the Mediterranean and Red Seas Sabehi,G., Massana,R., Bielawski,J.P., Rosenberg,M., Delong,E.F. and Beja,O. Environ. Microbiol. 5 (10), 842849 (2003) 14510837 PCR amplified from plankton DNA extracts ATGGGTAAATTATTATTGATCTTAGGTAGTGTTATTGCGCTTCCTTCATTTGCAGCTGGTGGCGGCGACCTTGATGCTGGTGATTACACTGGTGTTAGTTTTTGGTTAGTGACTGCAGCTCTTTTGGCTTCAACTGTATTTTTCTTTATTGAAAGAGATAGAGTTGCTGCTAAATGGAAGACATCTTTAACAGTATCTGGTCTAGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGTGTTTGGGTCGAAACTGGTGAATCACCAACTGTATTCAGATATATTGACTGGCTACTTACAGTGCCTTTATTAATATGTGAGTTTTATCTGATTCTTGCAGCTGCAACTAATGTTGCTGGTTCTTTATTTAAGAAGCTTTTAGTTGGTTCTCTTGTAATGCTTGTATTTGGTTATATGGGCGAAGCAGGAATTATGGCAGCTTGGCCTGCATTCATTGTTGGATGTTTAGCTTGGTTCTATATGATTTATGAGCTATGGGCTGGAGAAGGAAAATCTGCATGCAATACTGCAAGTCCAGCTGTTCAATCAGCATACAACACAATGATGTATATTATTATCATTGGTTGGGCTATTTATCCTCTTGGGTACTTTACTGGTTACCTAATGGGTGACGGCGGATCAGCCTTAAACTTAAACCTAATTTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATCATATGGCATGTCGCTGTTAAAGAATCTTCTAATGCT MGKLLLILGSVIALPSFAAGGGDLDAGDYTGVSFWLVTAALLASTVFFFIERDRVAAKWKTSLTVSGLVTGIAFWHYMYMRGVWVETGESPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIVGCLAWFYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIIGWAIYPLGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWHVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAATTATTATTGATCTTAGGTAGTGTTATTGCGCTTCCTTCATTTGCAGCT------GGTGGCGGCGACCTTGATGCTGGTGATTACACTGGTGTTAGTTTTTGGTTAGTGACTGCAGCTCTTTTGGCTTCAACTGTATTTTTCTTTATTGAAAGAGATAGAGTTGCTGCT---AAATGGAAGACATCTTTAACAGTATCTGGTCTAGTTACTGGTATTGCTTTCTGGCATTACATGTACATGAGAGGTGTTTGGGTC------------------------------GAA---------------------ACTGGTGAATCACCAACTGTATTCAGATATATTGACTGG------------------------CTACTTACAGTGCCTTTATTAATATGTGAGTTTTATCTGATTCTTGCAGCT---------GCA---ACTAATGTTGCTGGT---TCTTTA------------------------------------TTTAAGAAG---CTTTTAGTTGGTTCTCTTGTAATGCTTGTATTTGGTTATATGGGCGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATTGTTGGATGTTTAGCTTGGTTCTATATGATTTATGAGCTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGCAAT------ACT---GCAAGTCCAGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGTATATTATTATCATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCTCTTGGGTACTTTACTGGTTACCTAATG------------------------------------GGTGACGGCGGATCAGCCTTAAACTTAAACCTAATTTATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATCATATGGCATGTCGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MGKLLLILGSVIALPSFAA--GGGDLDAGDYTGVSFWLVTAALLASTVFFFIERDRVAA-KWKTSLTVSGLVTGIAFWHYMYMRGVWV----------E-------TGESPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIVGCLAWFYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIII---------------------GW---AIYPLGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWHVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_FJ560796 [IV-Gamma5-SAR86c] HEL68_env_samples_FJ560796 gi|223868739|gb|FJ560796| Uncultured microorganism clone HEL68 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL68 putative proteorhodopsin gene, partial cds FJ560796 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTGCCTTTATTAATATGTGAGTTTTATCTAATTCTTGCAGCTGCAACTAATGTTGCTGGTTCTCTATTTAAGAAACTTTTAGTTGGTTCTCTTGTAATGCTTGTATTTGGTTACATGGGCGAAGCAGGAATTATGGCGGCTTGGCCTGCATTCATTATTGGATGTTTAGCTTGGTTCTATATGATTTATGAGCTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCAGCTGTTCAATCAGCATACAACACAATGATGTAT TVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWFYMIYELWAGEGKSACNTASPAVQSAYNTMMY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTGCCTTTATTAATATGTGAGTTTTATCTAATTCTTGCAGCT---------GCA---ACTAATGTTGCTGGT---TCTCTA------------------------------------TTTAAGAAA---CTTTTAGTTGGTTCTCTTGTAATGCTTGTATTTGGTTACATGGGCGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------GCGGCT------------------TGGCCTGCA---TTCATTATTGGATGTTTAGCTTGGTTCTATATGATTTATGAGCTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCAGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGTAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWFYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MY------------------------------------------------------------------------------------------------------------------------------------ [IV-Gamma5-SAR86c]_DQ062252 [IV-Gamma5-SAR86c] MEDPR16A1_env_samples_DQ062252 gi|67483449|gb|DQ062252| Uncultured bacterium clone MEDPR16A1 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR16A1 proteorhodopsin gene, partial cds DQ062252 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na AGATACATAGACTGGCTACTAACAGTACCATTATTAATATGTGAATTTTACTTAATACTTGCAGCTGCAACTAATGTAGCTGGTTCTTTATTTAAAAAGCTATTAGTTGGTTCCCTTGTGATGCTTGTGTTTGGGTACATGGGTGAAGCAGGAATCATGGCGGCTTGGCCTGCATTCATTATTGGGTGCTTAGCTTGGTTCTATATGATTTATGAGCTATGGGCTGGTGAAGGAAAATCTGCATGTAATACTGCAAGTCCAGCTGTTCAGTCAGCATACAACACAATGATGTATATTATTATCATTGGTTGGGCTATTTATCCA RYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWFYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTAACAGTACCATTATTAATATGTGAATTTTACTTAATACTTGCAGCT---------GCA---ACTAATGTAGCTGGT---TCTTTA------------------------------------TTTAAAAAG---CTATTAGTTGGTTCCCTTGTGATGCTTGTGTTTGGGTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCGGCT------------------TGGCCTGCA---TTCATTATTGGGTGCTTAGCTTGGTTCTATATGATTTATGAGCTA---------------TGG------GCT---GGTGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCAGCTGTT---CAG---TCA---GCA---TAC---AAC---ACAATG---ATGTATATTATTATCATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWFYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIII---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916118 [IV-Gamma5-SAR86c] clone_UDXM-14_EU916118 gi|229359111|gb|EU916118| Uncultured bacterium clone UDXM-14 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone UDXM-14 putative proteorhodopsin gene, partial cds. EU916118 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCCTCAACTGTTTTCTTCTTTATTGAAAGAGACAGAGTTGCTGCAAAGTGGAAAACATCGTTAACAGTATCTGGTCTTGTTACTGGTATTGCATTCTGGCACTACTTGTATATGAGAGGAGTCTGGGTAGGTGAGTCACCAACTGTATTCAGATATATTGACTGGTTACTAACAGTGCCATTATTAATATGTGAGTTTTACTTAATACTTGCAGCTGCTAATGTTGCTGGTTCTTTATTTAAAAAGCTACTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCAGCCTGGCCTGCATTCATTCTTGGGTGCTTAGCTTGGATCTACATGATTTATGAGCTTTGGATGGGTGAAGGTAAAGCAGCCTGTAATACTGCAAGTCCCGCTGTTCAATCAGCATACAACACAATGATGCTTATTATTGTATTAGGTTGGGCAATA LASTVFFFIERDRVAAKWKTSLTVSGLVTGIAFWHYLYMRGVWVGESPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLIGSLVMLVFGYMGEAGIMAAWPAFILGCLAWIYMIYELWMGEGKAACNTASPAVQSAYNTMMLIIVLGWAI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCCTCAACTGTTTTCTTCTTTATTGAAAGAGACAGAGTTGCTGCA---AAGTGGAAAACATCGTTAACAGTATCTGGTCTTGTTACTGGTATTGCATTCTGGCACTACTTGTATATGAGAGGAGTCTGGGTA---------------------------------------------------------GGTGAGTCACCAACTGTATTCAGATATATTGACTGG------------------------TTACTAACAGTGCCATTATTAATATGTGAGTTTTACTTAATACTTGCAGCT---------GCT------AATGTTGCTGGT---TCTTTA------------------------------------TTTAAAAAG---CTACTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCAGCC------------------TGGCCTGCA---TTCATTCTTGGGTGCTTAGCTTGGATCTACATGATTTATGAGCTT---------------TGG------ATG---GGTGAA---GGTAAAGCAGCCTGTAAT------ACT---GCAAGTCCCGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGCTTATTATTGTATTA---------------------------------------------------------------GGTTGG---------GCAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFIERDRVAA-KWKTSLTVSGLVTGIAFWHYLYMRGVWV-------------------GESPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FILGCLAWIYMIYEL-----W--M-GE-GKAACN--T-ASPAV-Q-S-A-Y-N-TM-MLIIVL---------------------GW---AI---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916121 [IV-Gamma5-SAR86c] clone_UDXM-22_EU916121 gi|229359117|gb|EU916121| Uncultured bacterium clone UDXM-22 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone UDXM-22 putative proteorhodopsin gene, partial cds. EU916121 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCCTCAACTGTTTTCTTCTTTATTGAAAGAGACAGAGTTGCTGCAAAGTGGAAAACATCGTTAACAGTATCTGGTCTTGTTACTGGTATTGCATTCTGGCACTACTTGTATATGAGAGGAGTCTGGGTAGGTGAGTCACCAACTGTATTCAGATATATTGACTGGTTACTAACAGTGCCATTATTAATATGTGAGTTTTACTTAATACTTGCAGCTGCTAATGTTGCTGGTTCTTTATTTAAAAAGCTACTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCAGCCTGGCCTGCATTCATTCTTGGGTGCTTAGCTTGGATCTACATGATTTATGAGCTTTGGATGGGTGAAGGTAAAGCAGCCTGTAATACTGCAAGTCCCGCTGTTCAATCAGCATACAACACAATGATGCTTATTATTATCGTAGGATGGGCAATA LASTVFFFIERDRVAAKWKTSLTVSGLVTGIAFWHYLYMRGVWVGESPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLIGSLVMLVFGYMGEAGIMAAWPAFILGCLAWIYMIYELWMGEGKAACNTASPAVQSAYNTMMLIIIVGWAI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCCTCAACTGTTTTCTTCTTTATTGAAAGAGACAGAGTTGCTGCA---AAGTGGAAAACATCGTTAACAGTATCTGGTCTTGTTACTGGTATTGCATTCTGGCACTACTTGTATATGAGAGGAGTCTGGGTA---------------------------------------------------------GGTGAGTCACCAACTGTATTCAGATATATTGACTGG------------------------TTACTAACAGTGCCATTATTAATATGTGAGTTTTACTTAATACTTGCAGCT---------GCT------AATGTTGCTGGT---TCTTTA------------------------------------TTTAAAAAG---CTACTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCAGCC------------------TGGCCTGCA---TTCATTCTTGGGTGCTTAGCTTGGATCTACATGATTTATGAGCTT---------------TGG------ATG---GGTGAA---GGTAAAGCAGCCTGTAAT------ACT---GCAAGTCCCGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGCTTATTATTATCGTA---------------------------------------------------------------GGATGG---------GCAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFIERDRVAA-KWKTSLTVSGLVTGIAFWHYLYMRGVWV-------------------GESPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FILGCLAWIYMIYEL-----W--M-GE-GKAACN--T-ASPAV-Q-S-A-Y-N-TM-MLIIIV---------------------GW---AI---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916120 [IV-Gamma5-SAR86c] clone_UDXM-19_EU916120 gi|229359115|gb|EU916120| Uncultured bacterium clone UDXM-19 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone UDXM-19 putative proteorhodopsin gene, partial cds. EU916120 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCCTCAACTGTTTTCTTCTTTATTGAAAGAGACAGAGTTGCTGCAAAGTGGAAAACATCGTTAACAGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCACTACTTGTATATGAGAGGAGTCTGGGTAGGTGAGTCACCAACTGTATTCAGATATATTGACTGGTTACTAACAGTACCATTATTAATATGTGAGTTTTACTTAATACTTGCAGCTGCGAATGTTGCTGGTTCTTTATTTAAAAAGCTACTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCAGCCTGGCCTGCATTCATTCTTGGGTGCTTAGCTTGGATCTACATGATTTATGAGCTTTGGATGGGTGAAGGTAAAGCAGCCTGTAATACTGCAAGTCCTGCTGTTCAATCAGCATACAACACAATGATGCTTATTATTATAGTAGGATGGGCTATA LASTVFFFIERDRVAAKWKTSLTVSGLVTGIAFWHYLYMRGVWVGESPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLIGSLVMLVFGYMGEAGIMAAWPAFILGCLAWIYMIYELWMGEGKAACNTASPAVQSAYNTMMLIIIVGWAI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCCTCAACTGTTTTCTTCTTTATTGAAAGAGACAGAGTTGCTGCA---AAGTGGAAAACATCGTTAACAGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCACTACTTGTATATGAGAGGAGTCTGGGTA---------------------------------------------------------GGTGAGTCACCAACTGTATTCAGATATATTGACTGG------------------------TTACTAACAGTACCATTATTAATATGTGAGTTTTACTTAATACTTGCAGCT---------GCG------AATGTTGCTGGT---TCTTTA------------------------------------TTTAAAAAG---CTACTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCAGCC------------------TGGCCTGCA---TTCATTCTTGGGTGCTTAGCTTGGATCTACATGATTTATGAGCTT---------------TGG------ATG---GGTGAA---GGTAAAGCAGCCTGTAAT------ACT---GCAAGTCCTGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGCTTATTATTATAGTA---------------------------------------------------------------GGATGG---------GCTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFIERDRVAA-KWKTSLTVSGLVTGIAFWHYLYMRGVWV-------------------GESPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FILGCLAWIYMIYEL-----W--M-GE-GKAACN--T-ASPAV-Q-S-A-Y-N-TM-MLIIIV---------------------GW---AI---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916130 [IV-Gamma5-SAR86c] clone_UDXM-46_EU916130 gi|229359134|gb|EU916130| Uncultured bacterium clone UDXM-46 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone UDXM-46 putative proteorhodopsin gene, partial cds. EU916130 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCCTCAACTGTTTTCTTCTTTATTGAAAGAGACAGAGTTGCTGCAAAGTGGAAAACATCGTTAACAGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCACTACTTGTATATGAGAGGAGTCTGGGTAGGTGAGTCACCAACTGTATTCAGATATATTGACTGGTTACTAACAGTACCATTATTAATATGTGAGTTTTACTTAATACTTGCAGCTGCAAATGTTGCTGGTTCTTTATTTAAAAAGCTACTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCAGTCTGGCCTGCATTCATTCTTGGGTGCTTAGCTTGGATCTACATGATTTATGAGCTTTGGATGGGTGAAGGTAAAGCAGCCTGTAATACTGCAAATCCTGCTGTTCAATCAGCATACAACACAATGATGCTTATTATCATAGTAGGATGGGCG LASTVFFFIERDRVAAKWKTSLTVSGLVTGIAFWHYLYMRGVWVGESPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLIGSLVMLVFGYMGEAGIMAVWPAFILGCLAWIYMIYELWMGEGKAACNTANPAVQSAYNTMMLIIIVGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCCTCAACTGTTTTCTTCTTTATTGAAAGAGACAGAGTTGCTGCA---AAGTGGAAAACATCGTTAACAGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCACTACTTGTATATGAGAGGAGTCTGGGTA---------------------------------------------------------GGTGAGTCACCAACTGTATTCAGATATATTGACTGG------------------------TTACTAACAGTACCATTATTAATATGTGAGTTTTACTTAATACTTGCAGCT---------GCA------AATGTTGCTGGT---TCTTTA------------------------------------TTTAAAAAG---CTACTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCAGTC------------------TGGCCTGCA---TTCATTCTTGGGTGCTTAGCTTGGATCTACATGATTTATGAGCTT---------------TGG------ATG---GGTGAA---GGTAAAGCAGCCTGTAAT------ACT---GCAAATCCTGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGCTTATTATCATAGTA---------------------------------------------------------------GGATGG---------GCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFIERDRVAA-KWKTSLTVSGLVTGIAFWHYLYMRGVWV-------------------GESPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AV------WPA-FILGCLAWIYMIYEL-----W--M-GE-GKAACN--T-ANPAV-Q-S-A-Y-N-TM-MLIIIV---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916115 [IV-Gamma5-SAR86c] clone_XM-27_EU916115 gi|229359106|gb|EU916115| Uncultured bacterium clone XM-27 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone XM-27 putative proteorhodopsin gene, partial cds. EU916115 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCCTCAACTGTTTTCTTCTTTATTGAAAGAGACAGAGTTGCTGCAAAGTGGAAAACATCGTTAACAGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCACTACTTGTATATGAGAGGAGTCTGGGTAGGTGAGTCACCAACTGTATTCAGATATATTGACTGGTTACTAACAGTACCATTATTAATATGTGAGTTTTACTTAATACTTGCAGCTGCAAATGTTGCTGGTTCTTTATTTAAAAAGCTACTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCAGTCTGGCCTGCATTCATTCTTGGGTGCTTAGCTTGGATCTACATGATTTATGAGCTTTGGATGGGTGAAGGTAAAGCAGCCTGTAATACTGCAAATCCTGCTGTTCAATCAGCATACAACACAATGATGCTTATTATCATAGTAGGATGGGCG LASTVFFFIERDRVAAKWKTSLTVSGLVTGIAFWHYLYMRGVWVGESPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLIGSLVMLVFGYMGEAGIMAVWPAFILGCLAWIYMIYELWMGEGKAACNTANPAVQSAYNTMMLIIIVGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCCTCAACTGTTTTCTTCTTTATTGAAAGAGACAGAGTTGCTGCA---AAGTGGAAAACATCGTTAACAGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCACTACTTGTATATGAGAGGAGTCTGGGTA---------------------------------------------------------GGTGAGTCACCAACTGTATTCAGATATATTGACTGG------------------------TTACTAACAGTACCATTATTAATATGTGAGTTTTACTTAATACTTGCAGCT---------GCA------AATGTTGCTGGT---TCTTTA------------------------------------TTTAAAAAG---CTACTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCAGTC------------------TGGCCTGCA---TTCATTCTTGGGTGCTTAGCTTGGATCTACATGATTTATGAGCTT---------------TGG------ATG---GGTGAA---GGTAAAGCAGCCTGTAAT------ACT---GCAAATCCTGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGCTTATTATCATAGTA---------------------------------------------------------------GGATGG---------GCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFIERDRVAA-KWKTSLTVSGLVTGIAFWHYLYMRGVWV-------------------GESPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AV------WPA-FILGCLAWIYMIYEL-----W--M-GE-GKAACN--T-ANPAV-Q-S-A-Y-N-TM-MLIIIV---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU915976 [IV-Gamma5-SAR86c] clone_H10-12_EU915976 gi|229358833|gb|EU915976| Uncultured bacterium clone H10-12 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone H10-12 putative proteorhodopsin gene, partial cds. EU915976 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCCTCAACTGTTTTCTTCTTTATTGAAAGAGACAGAGTTGCTGCAAAGTGGAAAACATCGTTAACAGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCACTACTTGTATATGAGAGGAGTCTGGGTAGGTGAGTCACCAACTGTATTCAGATATATTGACTGGTTACTAACAGTACCATTATTAATATGTGAGTTTTACTTAATACTTGCAGCTGCAAATGTTGCTGGTTCTTTATTTAAAAAGCTACTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCAGCCTGGCCTGCATTCATTCTTGGGTGCTTAGCTTGGATCTACATGATTTATGAGCTTTGGATGGGTGAAGGTAAAGCAGCCTGTAATACTGCAAGTCCCGCTGTTCAATCAGCATGCAACACAATGATGCTTATTATCGTTGTCGGATGGGCGATA LASTVFFFIERDRVAAKWKTSLTVSGLVTGIAFWHYLYMRGVWVGESPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLIGSLVMLVFGYMGEAGIMAAWPAFILGCLAWIYMIYELWMGEGKAACNTASPAVQSACNTMMLIIVVGWAI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCCTCAACTGTTTTCTTCTTTATTGAAAGAGACAGAGTTGCTGCA---AAGTGGAAAACATCGTTAACAGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCACTACTTGTATATGAGAGGAGTCTGGGTA---------------------------------------------------------GGTGAGTCACCAACTGTATTCAGATATATTGACTGG------------------------TTACTAACAGTACCATTATTAATATGTGAGTTTTACTTAATACTTGCAGCT---------GCA------AATGTTGCTGGT---TCTTTA------------------------------------TTTAAAAAG---CTACTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCAGCC------------------TGGCCTGCA---TTCATTCTTGGGTGCTTAGCTTGGATCTACATGATTTATGAGCTT---------------TGG------ATG---GGTGAA---GGTAAAGCAGCCTGTAAT------ACT---GCAAGTCCCGCTGTT---CAA---TCA---GCA---TGC---AAC---ACAATG---ATGCTTATTATCGTTGTC---------------------------------------------------------------GGATGG---------GCGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFIERDRVAA-KWKTSLTVSGLVTGIAFWHYLYMRGVWV-------------------GESPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FILGCLAWIYMIYEL-----W--M-GE-GKAACN--T-ASPAV-Q-S-A-C-N-TM-MLIIVV---------------------GW---AI---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU915975 [IV-Gamma5-SAR86c] clone_H10-6_EU915975 gi|229358831|gb|EU915975| Uncultured bacterium clone H10-6 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone H10-6 putative proteorhodopsin gene, partial cds. EU915975 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCTAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTATATGAGAGGAGTATGGATTGGTGATTCACCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTTTATTAATATGTGAGTTTTACTTAATACTTGCAGCTGCAAATGTTGCTGGTTCTTTATTTAAAAAGCTACTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCAGCCTGGCCTGCATTCATTCTTGGGTGCTTAGCTTGGATCTACATGATTTATGAGCTTTGGATGGGTGAAGGTAAAGCAGCCTGTAATACTGCAAGTCCTGCTGTTCAATCAGCATACAACACAATGATGCTTATTATCATTTTAGGATGGGCG LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLIGSLVMLVFGYMGEAGIMAAWPAFILGCLAWIYMIYELWMGEGKAACNTASPAVQSAYNTMMLIIILGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGCATCTACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCT---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTATATGAGAGGAGTATGGATT---------------------------------------------------------GGTGATTCACCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTTTATTAATATGTGAGTTTTACTTAATACTTGCAGCT---------GCA------AATGTTGCTGGT---TCTTTA------------------------------------TTTAAAAAG---CTACTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCAGCC------------------TGGCCTGCA---TTCATTCTTGGGTGCTTAGCTTGGATCTACATGATTTATGAGCTT---------------TGG------ATG---GGTGAA---GGTAAAGCAGCCTGTAAT------ACT---GCAAGTCCTGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGCTTATTATCATTTTA---------------------------------------------------------------GGATGG---------GCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FILGCLAWIYMIYEL-----W--M-GE-GKAACN--T-ASPAV-Q-S-A-Y-N-TM-MLIIIL---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU915985 [IV-Gamma5-SAR86c] clone_H10-29_EU915985 gi|229358851|gb|EU915985| Uncultured bacterium clone H10-29 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone H10-29 putative proteorhodopsin gene, partial cds. EU915985 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCCTCTACTGTTTTCTTCTTTATTGAAAGAGATAGAGTTGCTGCAAAATGGAAAACATCGTTAACAGTATCTGGTCTTGTTACTGGTATTGCTTTTTGGCACTACTTGTATATGAGAGGAGTCTGGGTAGGTGAATCACCAACTGTGTTCAGATATATTGACTGGCTACTAACAGTGCCATTATTAATAGTAGAATTTTATTTAATTCTTGCAGCTGCAAATGTTGCTGGTTCACTATTTAAGAAGCTTTTATTAGGTTCACTTGTAATGCTTGTATTTGGATATATGGGTGAAGCAGGAATCATGAGTGCTGGATGGGCGTTCTTAATTGGATGCGCAGCTTGGATCTACATGATTTATGAGCTTTGGATGGGTGAAGGTAAAGCAGCCTGCAATACTGCTAGTCCAGCTGTTCAATCAGCATACAACACAATGATGTACATTATCGTTGTCGGTTGGGCG LASTVFFFIERDRVAAKWKTSLTVSGLVTGIAFWHYLYMRGVWVGESPTVFRYIDWLLTVPLLIVEFYLILAAANVAGSLFKKLLLGSLVMLVFGYMGEAGIMSAGWAFLIGCAAWIYMIYELWMGEGKAACNTASPAVQSAYNTMMYIIVVGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCCTCTACTGTTTTCTTCTTTATTGAAAGAGATAGAGTTGCTGCA---AAATGGAAAACATCGTTAACAGTATCTGGTCTTGTTACTGGTATTGCTTTTTGGCACTACTTGTATATGAGAGGAGTCTGGGTA---------------------------------------------------------GGTGAATCACCAACTGTGTTCAGATATATTGACTGG------------------------CTACTAACAGTGCCATTATTAATAGTAGAATTTTATTTAATTCTTGCAGCT---------GCA------AATGTTGCTGGT---TCACTA------------------------------------TTTAAGAAG---CTTTTATTAGGTTCACTTGTAATGCTTGTATTTGGATATATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------AGTGCT------------------GGATGGGCG---TTCTTAATTGGATGCGCAGCTTGGATCTACATGATTTATGAGCTT---------------TGG------ATG---GGTGAA---GGTAAAGCAGCCTGCAAT------ACT---GCTAGTCCAGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGTACATTATCGTTGTC---------------------------------------------------------------GGTTGG---------GCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFIERDRVAA-KWKTSLTVSGLVTGIAFWHYLYMRGVWV-------------------GESPTVFRYIDW--------LLTVPLLIVEFYLILAA---A--NVAG-SL------------FKK-LLLGSLVMLVFGYMGE---A------G--I-----------M----------------------SA------GWA-FLIGCAAWIYMIYEL-----W--M-GE-GKAACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIVV---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU915967 [IV-Gamma5-SAR86c] clone_H8-29_EU915967 gi|229358815|gb|EU915967| Uncultured bacterium clone H8-29 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone H8-29 putative proteorhodopsin gene, partial cds. EU915967 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCCTCAACTGTTTTCTTCTTTATTGAAAGAGACAGAGTTGCTGCAAAGTGGAAAACATCGTTAACAGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCACTACTTGTATATGAGAGGAGTCTGGGTAGGTGAGTCACCAACTGTATTCAGATATATTGACTGGTTACTAACAGTGCCATTATTAATAGTAGAATTTTATTTAATTCTTGCAGCTGCAAATGTTGCTGGTTCACTATTTAAGAAGCTTTTATTAGGTTCACTTGTAATGCTTGTGTTTGGATATATGGGTGAAGCAGGAATCATGAGTGCTGGATGGGCGTTCTTTATTGGATGCGTAGCTTGGATCTACATGATTTATGAGCTCTGGATGGGTGAAGGTAAAGCAGCCTGCAATACTGCTAGTCCAGCTGTTCAATCAGCATACAACACAATGATGTACATTATCGTAGTAGGTTGGGCG LASTVFFFIERDRVAAKWKTSLTVSGLVTGIAFWHYLYMRGVWVGESPTVFRYIDWLLTVPLLIVEFYLILAAANVAGSLFKKLLLGSLVMLVFGYMGEAGIMSAGWAFFIGCVAWIYMIYELWMGEGKAACNTASPAVQSAYNTMMYIIVVGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCCTCAACTGTTTTCTTCTTTATTGAAAGAGACAGAGTTGCTGCA---AAGTGGAAAACATCGTTAACAGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCACTACTTGTATATGAGAGGAGTCTGGGTA---------------------------------------------------------GGTGAGTCACCAACTGTATTCAGATATATTGACTGG------------------------TTACTAACAGTGCCATTATTAATAGTAGAATTTTATTTAATTCTTGCAGCT---------GCA------AATGTTGCTGGT---TCACTA------------------------------------TTTAAGAAG---CTTTTATTAGGTTCACTTGTAATGCTTGTGTTTGGATATATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------AGTGCT------------------GGATGGGCG---TTCTTTATTGGATGCGTAGCTTGGATCTACATGATTTATGAGCTC---------------TGG------ATG---GGTGAA---GGTAAAGCAGCCTGCAAT------ACT---GCTAGTCCAGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGTACATTATCGTAGTA---------------------------------------------------------------GGTTGG---------GCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFIERDRVAA-KWKTSLTVSGLVTGIAFWHYLYMRGVWV-------------------GESPTVFRYIDW--------LLTVPLLIVEFYLILAA---A--NVAG-SL------------FKK-LLLGSLVMLVFGYMGE---A------G--I-----------M----------------------SA------GWA-FFIGCVAWIYMIYEL-----W--M-GE-GKAACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIVV---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU915980 [IV-Gamma5-SAR86c] clone_H10-16_EU915980 gi|229358841|gb|EU915980| Uncultured bacterium clone H10-16 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone H10-16 putative proteorhodopsin gene, partial cds. EU915980 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTGGCCTCAACTGTTTTCTTCTTTATTGAAAGAGACAGAGTTGCTGCAAAATGGAAAACATCGTTAACAGTATCTGGTCTTGTTACTGGTATTGCTTTTTGGCACTACTTGTATATGAGAGGAGTCTGGGTAGGTGAATCACCAACTGTATTCAGATATATTGACTGGTTACTAACAGTACCATTATTAATAGTAGAATTTTACTTAATTCTTGCTGCTGCAAGTGTTGCTGGTTCACTATTCAAAAAGCTCTTATTGGCTTCGCTTGTAATGCTTGTATTTGGATATATGGGTGAAGCAGGAATCATGGGTGCTGGATTGGCGTTCGCTATTGGATGTGCAGCTTGGCTATACATGATATATGAACTTTGGATGGGTGAAGGTAAAGCAGCCTGTAATACCGCAAGTCCAGCTGTTCAATCAGCATACAACACAATGATGTACATTATCGTTGTAGGTTGGGCG LASTVFFFIERDRVAAKWKTSLTVSGLVTGIAFWHYLYMRGVWVGESPTVFRYIDWLLTVPLLIVEFYLILAAASVAGSLFKKLLLASLVMLVFGYMGEAGIMGAGLAFAIGCAAWLYMIYELWMGEGKAACNTASPAVQSAYNTMMYIIVVGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGCCTCAACTGTTTTCTTCTTTATTGAAAGAGACAGAGTTGCTGCA---AAATGGAAAACATCGTTAACAGTATCTGGTCTTGTTACTGGTATTGCTTTTTGGCACTACTTGTATATGAGAGGAGTCTGGGTA---------------------------------------------------------GGTGAATCACCAACTGTATTCAGATATATTGACTGG------------------------TTACTAACAGTACCATTATTAATAGTAGAATTTTACTTAATTCTTGCTGCT---------GCA------AGTGTTGCTGGT---TCACTA------------------------------------TTCAAAAAG---CTCTTATTGGCTTCGCTTGTAATGCTTGTATTTGGATATATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GGTGCT------------------GGATTGGCG---TTCGCTATTGGATGTGCAGCTTGGCTATACATGATATATGAACTT---------------TGG------ATG---GGTGAA---GGTAAAGCAGCCTGTAAT------ACC---GCAAGTCCAGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGTACATTATCGTTGTA---------------------------------------------------------------GGTTGG---------GCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFIERDRVAA-KWKTSLTVSGLVTGIAFWHYLYMRGVWV-------------------GESPTVFRYIDW--------LLTVPLLIVEFYLILAA---A--SVAG-SL------------FKK-LLLASLVMLVFGYMGE---A------G--I-----------M----------------------GA------GLA-FAIGCAAWLYMIYEL-----W--M-GE-GKAACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIVV---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916114 [IV-Gamma5-SAR86c] clone_DUXM-3_EU916114 gi|229359104|gb|EU916114| Uncultured bacterium clone DUXM-3 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone DUXM-3 putative proteorhodopsin gene, partial cds. EU916114 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCCTCAACTGTATTCTTCTTTATTGAAAGAGACAGAGTTGCTGCAAAATGGAAAACATCGTTAACAGTATCTGGTCTTGTTACCGGTATTGCTTTTTGGCACTACTTGTATATGAGAGGAGTCTGGGTAGGTGAATCACCAACTGTATTCAGATATATTGACTGGTTACTAACAGTGCCATTATTAATATGTGAGTTCTACTTAATACTTGCAGCTGCAAATGTTGCTGGTTCTTTGTTTAAAAAGCTATTAATTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATTATGGCAGCTTGGCCTGCATTCATTATAGGGTGCTTAGCTTGGTTCTACATGATTTATGAGCTATGGGCTGGTGAAGGAAAGTCTGCTTGTAATACTGCAAGTCCAGCTGTTCAATCAGCATACAACACAATGATGTATATTATCGTCGTCGGATGGGCAATA LASTVFFFIERDRVAAKWKTSLTVSGLVTGIAFWHYLYMRGVWVGESPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLIGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWFYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIVVGWAI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCCTCAACTGTATTCTTCTTTATTGAAAGAGACAGAGTTGCTGCA---AAATGGAAAACATCGTTAACAGTATCTGGTCTTGTTACCGGTATTGCTTTTTGGCACTACTTGTATATGAGAGGAGTCTGGGTA---------------------------------------------------------GGTGAATCACCAACTGTATTCAGATATATTGACTGG------------------------TTACTAACAGTGCCATTATTAATATGTGAGTTCTACTTAATACTTGCAGCT---------GCA------AATGTTGCTGGT---TCTTTG------------------------------------TTTAAAAAG---CTATTAATTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATTATAGGGTGCTTAGCTTGGTTCTACATGATTTATGAGCTA---------------TGG------GCT---GGTGAA---GGAAAGTCTGCTTGTAAT------ACT---GCAAGTCCAGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGTATATTATCGTCGTC---------------------------------------------------------------GGATGG---------GCAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFIERDRVAA-KWKTSLTVSGLVTGIAFWHYLYMRGVWV-------------------GESPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWFYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIVV---------------------GW---AI---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_AY250721 [IV-Gamma5-SAR86c] clone_medA15r9b5_partial_AY250721 gi|29470239|gb|AY250721| Uncultured bacterium clone medA15r9b5 proteorhodopsin gene, partial cds Uncultured bacterium clone medA15r9b5 proteorhodopsin gene, partial cds AY250721 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 20-Apr-2004 #na collected_from_a_depth_of_5_m_at_a_station_in_the_Alboran_Sea_[30_N/4.25_W]_in_May_1998 Mediterranean Sea marine 36 -4.25 Novel Proteorhodopsin variants from the Mediterranean and Red Seas Sabehi,G., Massana,R., Bielawski,J.P., Rosenberg,M., Delong,E.F. and Beja,O. Environ. Microbiol. 5 (10), 842849 (2003) 14510837 PCR amplified from plankton DNA extracts ATGGGTAAAGGATTACTGATGTTAGGTAGTGTTATTGCGCTTCCATCTTTTGCTGCTGGCGGTGGCGATCTTGATGCTAGTGACTATACAGGTGTTTCATTCTGGTTGGTTACTGCTGCATTATTAGCCTCAACTGTTTTCTTCTTTGTTGAAAGAGACAGAGTTGCTGCAAAATGGAAAACATCGTTAACAGTATCTGGTCTTGTTACTGGTATTGCTTTTTGGCATTACATGTACATGAGAGGGGTTTGGGTAGAGACTGGTGAATCACCAACTGTATTCAGATATATTGACTGGCTACTAACAGTACCATTATTAATATGTGAGTTCTACTTAATACTTGCAGCTGCAACTAATGTTGCTGGTTCTTTATTTAAAAAGCTATTAATTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCAGCTTGGCCTGCATTCATTATTGGGTGCTTAGCTTGGTTCTACATGATTTATGAACTATGGGCTGGTGAAGGAAAGTCTGCTTGTAATACTGCAAGTCCAGCTGTTCAATCAGCATACAACACGATGATGTATATTATTATCATTGGTTGGGCTATTTACCCTGTAGGTTACTTTACTGGTTACCTAATGGGTGACGGCGGATCTGCCTTAAACTTAAACCTAATTTATAACCTTGCTGACTTCGTTAACAAGATTCTATTTGGTTTAATTATCTGGCATGTTGCTGTTAAAGAATCTTCTAATGCT MGKGLLMLGSVIALPSFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVAAKWKTSLTVSGLVTGIAFWHYMYMRGVWVETGESPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLIGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWFYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIIGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWHVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAAGGATTACTGATGTTAGGTAGTGTTATTGCGCTTCCATCTTTTGCTGCT------GGCGGTGGCGATCTTGATGCTAGTGACTATACAGGTGTTTCATTCTGGTTGGTTACTGCTGCATTATTAGCCTCAACTGTTTTCTTCTTTGTTGAAAGAGACAGAGTTGCTGCA---AAATGGAAAACATCGTTAACAGTATCTGGTCTTGTTACTGGTATTGCTTTTTGGCATTACATGTACATGAGAGGGGTTTGGGTA------------------------------GAG---------------------ACTGGTGAATCACCAACTGTATTCAGATATATTGACTGG------------------------CTACTAACAGTACCATTATTAATATGTGAGTTCTACTTAATACTTGCAGCT---------GCA---ACTAATGTTGCTGGT---TCTTTA------------------------------------TTTAAAAAG---CTATTAATTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATTATTGGGTGCTTAGCTTGGTTCTACATGATTTATGAACTA---------------TGG------GCT---GGTGAA---GGAAAGTCTGCTTGTAAT------ACT---GCAAGTCCAGCTGTT---CAA---TCA---GCA---TAC---AAC---ACGATG---ATGTATATTATTATCATT---------------------------------------------------------------GGTTGG---------GCTATTTACCCTGTAGGTTACTTTACTGGTTACCTAATG------------------------------------GGTGACGGCGGATCTGCCTTAAACTTAAACCTAATTTATAACCTTGCTGACTTCGTTAACAAGATTCTATTTGGTTTAATTATCTGGCATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MGKGLLMLGSVIALPSFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVAA-KWKTSLTVSGLVTGIAFWHYMYMRGVWV----------E-------TGESPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWFYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIII---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWHVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_EU916001 [IV-Gamma5-SAR86c] clone_4S3-24_EU916001 gi|229358883|gb|EU916001| Uncultured bacterium clone 4S3-24 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 4S3-24 putative proteorhodopsin gene, partial cds. EU916001 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCCTCAACTGTTTTCTTTTTTATTGAAAGAGACAGGGTTGCTGCAAGATGGAAAACATCGTTAACAGTATCTGGTCTTGTTACTGGTATTGCTTTTTGGCATTACATGTATATGAGAGGAGTCTGGGTAGGTGAATCACCAACTGTATTCAGATACATTGACTGGTTACTAACAGTGCCATTATTAATATGTGAGTTCTACTTAATACTTGCAGCTGCAAATGTTGCAGGTTCCTTGTTTAAAAAGCTATTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCAGCTTGGCCTGCATTCATTGTTGGGTGCTTAGCTTGGGTCTACATGATCTATGAGCTATGGGCTGGTGAAGGAAAATCTGCTTGTAATACTGCAAGTCCAGCTGTTCAATCAGCATACAACACAATGATGTATATTATTATAGTCGGATGGGCA LASTVFFFIERDRVAARWKTSLTVSGLVTGIAFWHYMYMRGVWVGESPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLIGSLVMLVFGYMGEAGIMAAWPAFIVGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIVGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCCTCAACTGTTTTCTTTTTTATTGAAAGAGACAGGGTTGCTGCA---AGATGGAAAACATCGTTAACAGTATCTGGTCTTGTTACTGGTATTGCTTTTTGGCATTACATGTATATGAGAGGAGTCTGGGTA---------------------------------------------------------GGTGAATCACCAACTGTATTCAGATACATTGACTGG------------------------TTACTAACAGTGCCATTATTAATATGTGAGTTCTACTTAATACTTGCAGCT---------GCA------AATGTTGCAGGT---TCCTTG------------------------------------TTTAAAAAG---CTATTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATTGTTGGGTGCTTAGCTTGGGTCTACATGATCTATGAGCTA---------------TGG------GCT---GGTGAA---GGAAAATCTGCTTGTAAT------ACT---GCAAGTCCAGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGTATATTATTATAGTC---------------------------------------------------------------GGATGG---------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFIERDRVAA-RWKTSLTVSGLVTGIAFWHYMYMRGVWV-------------------GESPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIVGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIV---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916005 [IV-Gamma5-SAR86c] clone_4S3-48_EU916005 gi|229358891|gb|EU916005| Uncultured bacterium clone 4S3-48 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 4S3-48 putative proteorhodopsin gene, partial cds. EU916005 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCCTCAACTGTTTTCTTTTTTATTGAAAGAGACAGGGTTGCTGCAAGATGGAAAACATCGTTAACAGTATCTGGTCTTGTTACTGGTATTGCTTTTTGGCATTACATGTATATGAGAGGAGTCTGGGTAGGTGAATCACCAACTGTATTCAGATACATTGACTGGTTACTAACAGTGCCATTATTAATATGTGAGTTCTACTTAATACTTGCAGCTGCAAATGTTGCAGGTTCCTTGTTTAAAAAGCTATTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCAGCTTGGCCTGCATTCATTGTTGGGTGCTTAGCTTGGGTCTACATGATCTATGAGCTATGGGCTGGTGAAGGAAAATCTGCTTGTAATACTGCAAGTCCAGCTGTTCAATCAGCATACAACACAATGATGTATATTATTATAGTCGGATGGGCA LASTVFFFIERDRVAARWKTSLTVSGLVTGIAFWHYMYMRGVWVGESPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLIGSLVMLVFGYMGEAGIMAAWPAFIVGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIVGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCCTCAACTGTTTTCTTTTTTATTGAAAGAGACAGGGTTGCTGCA---AGATGGAAAACATCGTTAACAGTATCTGGTCTTGTTACTGGTATTGCTTTTTGGCATTACATGTATATGAGAGGAGTCTGGGTA---------------------------------------------------------GGTGAATCACCAACTGTATTCAGATACATTGACTGG------------------------TTACTAACAGTGCCATTATTAATATGTGAGTTCTACTTAATACTTGCAGCT---------GCA------AATGTTGCAGGT---TCCTTG------------------------------------TTTAAAAAG---CTATTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATTGTTGGGTGCTTAGCTTGGGTCTACATGATCTATGAGCTA---------------TGG------GCT---GGTGAA---GGAAAATCTGCTTGTAAT------ACT---GCAAGTCCAGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGTATATTATTATAGTC---------------------------------------------------------------GGATGG---------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFIERDRVAA-RWKTSLTVSGLVTGIAFWHYMYMRGVWV-------------------GESPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIVGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIV---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916003 [IV-Gamma5-SAR86c] clone_4S3-38_EU916003 gi|229358887|gb|EU916003| Uncultured bacterium clone 4S3-38 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 4S3-38 putative proteorhodopsin gene, partial cds. EU916003 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCCTCAACTGTTTTCTTTTTTATTGAAAGAGACAGGGTTGCTGCAAAATGGAAAACATCGTTAACAGTATCTGGTCTTGTTACTGGTATTGCTTTTTGGCATTACATGTATATGAGAGGAGTCTGGGTAGGTGAATCACCAACTGTATTCAGATACATTGACTGGTTACTAACAGTGCCATTATTAATATGTGAGTTCTACTTAATACTTGCAGCTGCAAATGTTGCAGGTTCCTTGTTTAAAAAGCTATTAATTGGTTCTCTTGTGATACTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCAGCTTGGCCTGCATTCATTGTTGGGTGCTTAGCTTGGGTCTACATGATCTATGAGCTATGGGCTGGTGAAGGAAAATCTGCTTGTAATACTGCAAGTCCAGCTGTTCAATCAGCATACAACACAATGATGTATATTATCATCGTCGGTTGGGCA LASTVFFFIERDRVAAKWKTSLTVSGLVTGIAFWHYMYMRGVWVGESPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLIGSLVILVFGYMGEAGIMAAWPAFIVGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIVGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCCTCAACTGTTTTCTTTTTTATTGAAAGAGACAGGGTTGCTGCA---AAATGGAAAACATCGTTAACAGTATCTGGTCTTGTTACTGGTATTGCTTTTTGGCATTACATGTATATGAGAGGAGTCTGGGTA---------------------------------------------------------GGTGAATCACCAACTGTATTCAGATACATTGACTGG------------------------TTACTAACAGTGCCATTATTAATATGTGAGTTCTACTTAATACTTGCAGCT---------GCA------AATGTTGCAGGT---TCCTTG------------------------------------TTTAAAAAG---CTATTAATTGGTTCTCTTGTGATACTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATTGTTGGGTGCTTAGCTTGGGTCTACATGATCTATGAGCTA---------------TGG------GCT---GGTGAA---GGAAAATCTGCTTGTAAT------ACT---GCAAGTCCAGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGTATATTATCATCGTC---------------------------------------------------------------GGTTGG---------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFIERDRVAA-KWKTSLTVSGLVTGIAFWHYMYMRGVWV-------------------GESPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLIGSLVILVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIVGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIV---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916129 [IV-Gamma5-SAR86c] clone_UDXM-45_EU916129 gi|229359132|gb|EU916129| Uncultured bacterium clone UDXM-45 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone UDXM-45 putative proteorhodopsin gene, partial cds. EU916129 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCCTCAACTGTTTTCTTTTTTATTGAAAGAGACAGAGTTGCTGCAAAATGGAAAACATCGTTAACAGTATCTGGTCTTGTTACTGGTATTGCTTTTTGGCATTACTTGTATATGAGAGGAGTCTGGGTAGGTGAATCACCAACTGTATTCAGATACATTGACTGGTTACTAACAGTGCCATTATTAATATGTGAGTTCTACTTAATACTTGCAGCTGCAAATGTTGCAGGTTCCTTGTTTAAAAAGCTATTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCAGCTTGGCCTGCATTCATTGTTGGGTGCTTAGCTTGGGTCTACATGATTTATGAGCTATGGGCTGGTGAAGGAAAATCTGCATGTAATACTGCAAGTCCAGCTGTTCAATCAGCATACAACACAATGATGTATATTATTGTATTCGGTTGGGCA LASTVFFFIERDRVAAKWKTSLTVSGLVTGIAFWHYLYMRGVWVGESPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLIGSLVMLVFGYMGEAGIMAAWPAFIVGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIVFGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCCTCAACTGTTTTCTTTTTTATTGAAAGAGACAGAGTTGCTGCA---AAATGGAAAACATCGTTAACAGTATCTGGTCTTGTTACTGGTATTGCTTTTTGGCATTACTTGTATATGAGAGGAGTCTGGGTA---------------------------------------------------------GGTGAATCACCAACTGTATTCAGATACATTGACTGG------------------------TTACTAACAGTGCCATTATTAATATGTGAGTTCTACTTAATACTTGCAGCT---------GCA------AATGTTGCAGGT---TCCTTG------------------------------------TTTAAAAAG---CTATTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATTGTTGGGTGCTTAGCTTGGGTCTACATGATTTATGAGCTA---------------TGG------GCT---GGTGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCAGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGTATATTATTGTATTC---------------------------------------------------------------GGTTGG---------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFIERDRVAA-KWKTSLTVSGLVTGIAFWHYLYMRGVWV-------------------GESPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIVGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIVF---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916116 [IV-Gamma5-SAR86c] clone_UDXM-3_EU916116 gi|229359108|gb|EU916116| Uncultured bacterium clone UDXM-3 putative proteorhodopsin-like gene, partial sequence. Uncultured bacterium clone UDXM-3 putative proteorhodopsin-like gene, partial sequence. EU916116 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na GGTGACCTAGATGCTGGTGACACCACAGGTGTTTCATTCTGGTTAGTTACTGCTGCATTGTTAGCCTCTACTGTTTTCTTCTTTATTGAAAGAGATAGAGTTGCTGCAAAATGGAAAACATCGTTAACAGTATCTGGTCTTGTTACTGGTATTGCTTTTTGGCATTACTTGTATATGAGAGGAGTCTGGGTAGAGACTGGTGAATCACCAACTGTATTCAGATACATTGACTGGTTACTAACAGTGCCATTATTAATATGTGAGTTCTACTTAATACTTGCAGCTGCAACTAATGTTGCAGGTTCCTTGTTTAAAAAGCTATTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCAGCTTGGCCTGCATTCATTGTTGGGTGCTTAGCTTGGGTCTACATGATTTATGAGCTATGGGCTGGTGAAGGAAAATCTGCATGTAATACTGCAAGTCCAGCTGTTCAATCAGCATACAACACAATGATGTATATTATCATCTTTGGGTTGGGGCTATA GDLDAGDTTGVSFWLVTAALLASTVFFFIERDRVAAKWKTSLTVSGLVTGIAFWHYLYMRGVWVETGESPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLIGSLVMLVFGYMGEAGIMAAWPAFIVGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGLGL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGACCTAGATGCTGGTGACACCACAGGTGTTTCATTCTGGTTAGTTACTGCTGCATTGTTAGCCTCTACTGTTTTCTTCTTTATTGAAAGAGATAGAGTTGCTGCA---AAATGGAAAACATCGTTAACAGTATCTGGTCTTGTTACTGGTATTGCTTTTTGGCATTACTTGTATATGAGAGGAGTCTGGGTA------------------------------GAG---------------------ACTGGTGAATCACCAACTGTATTCAGATACATTGACTGG------------------------TTACTAACAGTGCCATTATTAATATGTGAGTTCTACTTAATACTTGCAGCT---------GCA---ACTAATGTTGCAGGT---TCCTTG------------------------------------TTTAAAAAG---CTATTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATTGTTGGGTGCTTAGCTTGGGTCTACATGATTTATGAGCTA---------------TGG------GCT---GGTGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCAGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGGTTG---------GGGCTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------------------------------GDLDAGDTTGVSFWLVTAALLASTVFFFIERDRVAA-KWKTSLTVSGLVTGIAFWHYLYMRGVWV----------E-------TGESPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIVGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GL---GL---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916113 [IV-Gamma5-SAR86c] clone_UDXM-63_EU916113 gi|229359103|gb|EU916113| Uncultured bacterium clone UDXM-63 putative proteorhodopsin-like gene, partial sequence. Uncultured bacterium clone UDXM-63 putative proteorhodopsin-like gene, partial sequence. EU916113 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na GGTGACCTAGATGCTGGTGACACCACAGGTGTTTCATTCTGGTTAGTTACTGCTGCATTGTTAGCCTCTACTGTTTTCTTCTTTATTGAAAGAGATAGAGTTGCTGCAAAATGGAAAACATCGTTAACAGTATCTGGTCTTGTTACTGGTATTGCTTTTTGGCATTACTTGTATATGAGAGGAGTCTGGGTAGAGACTGGTGAATCACCAACTGTATTCAGATACATTGACTGGTTACTAACAGTGCCATTATTAATATGTGAGTTCTACTTAATACTTGCAGCTGCAACTAATGTTGCAGGTTCCTTGTTTAAAAAGCTATTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCAGCTTGGCCTGCATTCATTGTTGGGTGCTTAGCTTGGGTCTACATGATTTATGAGCTATGGGCTGGTGAAGGAAAATCTGCATGTAATACTGCAAGTCCAGCTGTTCAATCAGCATACAACACAATGATGTATATTATCATCTTTGGGTTGGGGCTATA GDLDAGDTTGVSFWLVTAALLASTVFFFIERDRVAAKWKTSLTVSGLVTGIAFWHYLYMRGVWVETGESPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLIGSLVMLVFGYMGEAGIMAAWPAFIVGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGLGL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGACCTAGATGCTGGTGACACCACAGGTGTTTCATTCTGGTTAGTTACTGCTGCATTGTTAGCCTCTACTGTTTTCTTCTTTATTGAAAGAGATAGAGTTGCTGCA---AAATGGAAAACATCGTTAACAGTATCTGGTCTTGTTACTGGTATTGCTTTTTGGCATTACTTGTATATGAGAGGAGTCTGGGTA------------------------------GAG---------------------ACTGGTGAATCACCAACTGTATTCAGATACATTGACTGG------------------------TTACTAACAGTGCCATTATTAATATGTGAGTTCTACTTAATACTTGCAGCT---------GCA---ACTAATGTTGCAGGT---TCCTTG------------------------------------TTTAAAAAG---CTATTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATTGTTGGGTGCTTAGCTTGGGTCTACATGATTTATGAGCTA---------------TGG------GCT---GGTGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCAGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGGTTG---------GGGCTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------------------------------GDLDAGDTTGVSFWLVTAALLASTVFFFIERDRVAA-KWKTSLTVSGLVTGIAFWHYLYMRGVWV----------E-------TGESPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIVGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GL---GL---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU916119 [IV-Gamma5-SAR86c] clone_UDXM-18_EU916119 gi|229359113|gb|EU916119| Uncultured bacterium clone UDXM-18 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone UDXM-18 putative proteorhodopsin gene, partial cds. EU916119 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCCTCTACTGTTTTCTTCTTTATTGAAAGAGATAGAGTTGCTGCAAAATGGAAAACATCGTTAACAGTATCTGGTCTTGTTACTGGTATTGCTTTTTGGCATTACTTGTATATGAGAGGAGTCTGGGTAGGTGAATCACCAACTGTATTCAGATACATTGACTGGTTACTAACAGTGCCATTATTAATATGTGAGTTCTACTTAATACTTGCAGCTGCAAATGTTGCAGGTTCCTTGTTTAAAAAGCTATTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCAGCTTGGCCTGCATTCATTGTTGGGTGCTTAGCTTGGGTCTACATGATTTATGAGCTATGGGCTGGTGAAGGAAAATCTGCATGTAATACTGCAAGTCCAGCTGTTCAATCAGCATACAACACAATGATGTATATTATCATCTTTGGTTGGGCTATA LASTVFFFIERDRVAAKWKTSLTVSGLVTGIAFWHYLYMRGVWVGESPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLIGSLVMLVFGYMGEAGIMAAWPAFIVGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCCTCTACTGTTTTCTTCTTTATTGAAAGAGATAGAGTTGCTGCA---AAATGGAAAACATCGTTAACAGTATCTGGTCTTGTTACTGGTATTGCTTTTTGGCATTACTTGTATATGAGAGGAGTCTGGGTA---------------------------------------------------------GGTGAATCACCAACTGTATTCAGATACATTGACTGG------------------------TTACTAACAGTGCCATTATTAATATGTGAGTTCTACTTAATACTTGCAGCT---------GCA------AATGTTGCAGGT---TCCTTG------------------------------------TTTAAAAAG---CTATTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATTGTTGGGTGCTTAGCTTGGGTCTACATGATTTATGAGCTA---------------TGG------GCT---GGTGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCAGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGTATATTATCATCTTT---------------------------------------------------------------GGTTGG---------GCTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFIERDRVAA-KWKTSLTVSGLVTGIAFWHYLYMRGVWV-------------------GESPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIVGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AI---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_DQ422165 [IV-Gamma5-SAR86c] clone_med-0m-b12_DQ422165 gi|90023850|gb|DQ422165| Uncultured bacterium clone med-0m-b12 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-b12 putative proteorhodopsin gene, partial cds. DQ422165 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTACTAACAGTACCATTATTAATATGTGAGTTCTACTTAATACTTGCAGCTGCAACTAATGTTGCAGGTTCTTTGTTTAAAAAGCTATTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCAGCTTGGCCTGCATTCATTGTTGGGTGCTTAGCTTGGGTCTACATGATTTATGAGCTATGGGCTGGTGAAGGAAAATCTGCATGTAATACTGCAAGTCCAGCTGTTCAATCAGCATACAACACAATGATGTATATTATTATCTTTGGTTGGGCTATTTATCCA RYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLIGSLVMLVFGYMGEAGIMAAWPAFIVGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTAACAGTACCATTATTAATATGTGAGTTCTACTTAATACTTGCAGCT---------GCA---ACTAATGTTGCAGGT---TCTTTG------------------------------------TTTAAAAAG---CTATTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATTGTTGGGTGCTTAGCTTGGGTCTACATGATTTATGAGCTA---------------TGG------GCT---GGTGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCAGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGTATATTATTATCTTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIVGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_DQ422253 [IV-Gamma5-SAR86c] clone_med-20m-a12_DQ422253 gi|90024026|gb|DQ422253| Uncultured bacterium clone med-20m-a12 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-a12 putative proteorhodopsin gene, partial cds. DQ422253 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTACTAACAGTACCATTATTAATATGTGAGTTCTACTTAATACTTGCAGCTGCAACTAATGTTGCAGGTTCTTTGTTTAAAAAGCTATTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCAGCTTGGCCTGCATTCATTGTTGGGTGCTTAGCTTGGGTCTACATGATTTATGAGCTATGGGCTGGTGAAGGAAAATCTGCATGTAATACTGCAAGTCCAGCTGTTCAATCAGCATACAACACAATGATGTATATTATTATCTTTGGTTGGGCTATTTATCCA RYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLIGSLVMLVFGYMGEAGIMAAWPAFIVGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTAACAGTACCATTATTAATATGTGAGTTCTACTTAATACTTGCAGCT---------GCA---ACTAATGTTGCAGGT---TCTTTG------------------------------------TTTAAAAAG---CTATTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATTGTTGGGTGCTTAGCTTGGGTCTACATGATTTATGAGCTA---------------TGG------GCT---GGTGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCAGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGTATATTATTATCTTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIVGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_DQ422462 [IV-Gamma5-SAR86c] clone_med-tb04-50m-b2_DQ422462 gi|90024444|gb|DQ422462| Uncultured bacterium clone med-tb04-50m-b2 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-b2 putative proteorhodopsin gene, partial cds. DQ422462 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTACTAACAGTACCATTATTAATATGTGAGTTCTACTTAATACTTGCAGCTGCAACTAATGTTGCAGGTTCCTTGTTTAAAAAGCTATTAATTGGTTCACTTGTGATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCAGCTTGGCCTGCATTCATTGTTGGGTGCTTAGCTTGGGTCTACATGATTTATGAGCTATGGGCTGGTGAAGGAAAATCTGCATGTAATACTGCAAGTCCAGCTGTTCAATCAGCATATAACACAATGATGTATATTATTATCTTTGGTTGGGCTATTTATCCA RYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLIGSLVMLVFGYMGEAGIMAAWPAFIVGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTAACAGTACCATTATTAATATGTGAGTTCTACTTAATACTTGCAGCT---------GCA---ACTAATGTTGCAGGT---TCCTTG------------------------------------TTTAAAAAG---CTATTAATTGGTTCACTTGTGATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATTGTTGGGTGCTTAGCTTGGGTCTACATGATTTATGAGCTA---------------TGG------GCT---GGTGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCAGCTGTT---CAA---TCA---GCA---TAT---AAC---ACAATG---ATGTATATTATTATCTTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIVGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_DQ422497 [IV-Gamma5-SAR86c] clone_med-tb04-50m-e12_DQ422497 gi|90024514|gb|DQ422497| Uncultured bacterium clone med-tb04-50m-e12 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-e12 putative proteorhodopsin gene, partial cds. DQ422497 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATTGACTGGCTACTAACAGTACCATTATTAATATGTGAGTTCTACTTAATACTTGCAGCTGCAACTAATGTTGCAGGTTCTTTGTTTAAAAAGCTATTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCTGCTTGGCCTGCATTCATTGTTGGGTGCTTAGCTTGGGTCTACATGATTTATGAGCTATGGGCTGGTGAAGGAAAATCTGCATGTAATACTGCAAGTCCAGCTGTTCAATCAGCATACAACACAATGATGTATATTATTATCTTTGGTTGGGCTATTTATCCA RYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLIGSLVMLVFGYMGEAGIMAAWPAFIVGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTACTAACAGTACCATTATTAATATGTGAGTTCTACTTAATACTTGCAGCT---------GCA---ACTAATGTTGCAGGT---TCTTTG------------------------------------TTTAAAAAG---CTATTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCTGCT------------------TGGCCTGCA---TTCATTGTTGGGTGCTTAGCTTGGGTCTACATGATTTATGAGCTA---------------TGG------GCT---GGTGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCAGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGTATATTATTATCTTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIVGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_DQ203450 [IV-Gamma5-SAR86c] medHO10B5_env_samples_DQ203450 gi|77547348|gb|DQ203450| Uncultured bacterium clone medHO10B5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10B5 predicted proteorhodopsin gene, partial cds DQ203450 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTACTAACAGTACCATTATTAATATGTGAGTTCTACTTAATACTTGCAGCTGCAACTAATGTTGCAGGTTCTTTGTTTAAAAAGCTATTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCAGCTTGGCCTGCATTCATTGTTGGGTGCTTAGCTTGGGTCTACATGATTTATGAGCTATGGGCTGGTGAAGGAAAATCTGCATGTAATACTGCAAGTCCAGCTGTTCAATCAGCATACAACACAATGATGTATATTATTATCTTTGGTTGGGCCATTTATCCA RYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLIGSLVMLVFGYMGEAGIMAAWPAFIVGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTACTAACAGTACCATTATTAATATGTGAGTTCTACTTAATACTTGCAGCT---------GCA---ACTAATGTTGCAGGT---TCTTTG------------------------------------TTTAAAAAG---CTATTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATTGTTGGGTGCTTAGCTTGGGTCTACATGATTTATGAGCTA---------------TGG------GCT---GGTGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCAGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGTATATTATTATCTTT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIVGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_DQ203361 [IV-Gamma5-SAR86c] MedHO102B8_env_samples_DQ203361 gi|77547170|gb|DQ203361| Uncultured bacterium clone MedHO102B8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102B8 predicted proteorhodopsin gene, partial cds DQ203361 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTACTAACAGTACCATTATTAATATGTGAGTTCTACTTAATACTTGCAGCTGCAACTAATGTTGCTGGTTCCTTGTTTAAAAAGCTATTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATTATGGCAGCTTGGCCTGCATTCATTGTTGGGTGCTTAGCTTGGGTCTACATGATTTATGAGCTATGGGCTGGTGAAGGAAAATCTGCATGTAATACTGCAAGTCCAGCTGTTCAATCAGCATACAACACAATGATGTATATTATTATCTTTGGTTGGGCCATTTATCCA RYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLIGSLVMLVFGYMGEAGIMAAWPAFIVGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTACTAACAGTACCATTATTAATATGTGAGTTCTACTTAATACTTGCAGCT---------GCA---ACTAATGTTGCTGGT---TCCTTG------------------------------------TTTAAAAAG---CTATTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATTGTTGGGTGCTTAGCTTGGGTCTACATGATTTATGAGCTA---------------TGG------GCT---GGTGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCAGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGTATATTATTATCTTT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIVGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_DQ203624 [IV-Gamma5-SAR86c] medHO120E11_env_samples_DQ203624 gi|77547696|gb|DQ203624| Uncultured bacterium clone medHO120E11 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120E11 predicted proteorhodopsin gene, partial cds DQ203624 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGACTGGCTACTAACAGTACCATTATTAATATGTGAGTTCTACTTAATACTTGCAGCTGCAACTAATGTTGCTGGTTCCTTGTTTAAAAAGCTATTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCAGCTTGGCCTGCATTCATTGTTGGGTGCTTAGCTTGGGTCTACATGATTTATGAGCTATGGGCTGGTGAAGGAAAATCTGCATGTAATACTGCAAGTCCAGCTGTTCAATCAGCATACAACACAATGATGTATATTATTATCTTTGGTTGGGCCATTTATCCA RYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLIGSLVMLVFGYMGEAGIMAAWPAFIVGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGACTGG------------------------CTACTAACAGTACCATTATTAATATGTGAGTTCTACTTAATACTTGCAGCT---------GCA---ACTAATGTTGCTGGT---TCCTTG------------------------------------TTTAAAAAG---CTATTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATTGTTGGGTGCTTAGCTTGGGTCTACATGATTTATGAGCTA---------------TGG------GCT---GGTGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCAGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGTATATTATTATCTTT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIVGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EF088584 [IV-Gamma5-SAR86c] clone_AT37059_EF088584 gi|126843407|gb|EF088584| Uncultured bacterium clone AT37059 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT37059 putative proteorhodopsin gene, partial cds. EF088584 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na surface water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGCTCGCCGCTACTGTATTCTTCTTTATTGAAAGAGATAGAGTTGCTGCAAAATGGAAAACATCGTTAACAGTATCTGGTCTTGTTACTGGTATTGCTTTTTGGCACTACTTGTATATGAGAGGAGTCTGGGTAGAGACTGGTGAATCACCAACTGTATTCAGATATATTGACTGGCTACTAGCAGTACCATTATTAATATGTGAGTTCTACTTAATACTTGCAGCTGCAACTAATGTTGCAGGTTCCTTGTTTAAAAAGCTATTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCAGCTTGGCCTGCATTCATTGTTGGGTGCTTAGCTTGGGTCCACATGATTTATGAGCTATGGGCTGGTGAAGGAAAATCTGCATGTAATACTGCAAGTCCAGCTGTTCAATCAGCATATAACACAATGATGTATATTATTATCTTTGGATGGGCAATCTACCCA MLAATVFFFIERDRVAAKWKTSLTVSGLVTGIAFWHYLYMRGVWVETGESPTVFRYIDWLLAVPLLICEFYLILAAATNVAGSLFKKLLIGSLVMLVFGYMGEAGIMAAWPAFIVGCLAWVHMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTCGCCGCTACTGTATTCTTCTTTATTGAAAGAGATAGAGTTGCTGCA---AAATGGAAAACATCGTTAACAGTATCTGGTCTTGTTACTGGTATTGCTTTTTGGCACTACTTGTATATGAGAGGAGTCTGGGTA------------------------------GAG---------------------ACTGGTGAATCACCAACTGTATTCAGATATATTGACTGG------------------------CTACTAGCAGTACCATTATTAATATGTGAGTTCTACTTAATACTTGCAGCT---------GCA---ACTAATGTTGCAGGT---TCCTTG------------------------------------TTTAAAAAG---CTATTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATTGTTGGGTGCTTAGCTTGGGTCCACATGATTTATGAGCTA---------------TGG------GCT---GGTGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCAGCTGTT---CAA---TCA---GCA---TAT---AAC---ACAATG---ATGTATATTATTATCTTT---------------------------------------------------------------GGATGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFIERDRVAA-KWKTSLTVSGLVTGIAFWHYLYMRGVWV----------E-------TGESPTVFRYIDW--------LLAVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIVGCLAWVHMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EF088585 [IV-Gamma5-SAR86c] clone_AT37060_EF088585 gi|126843409|gb|EF088585| Uncultured bacterium clone AT37060 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT37060 putative proteorhodopsin gene, partial cds. EF088585 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na surface water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGCTCGCCGCTACTGCGTTCTTTATTGAAAGAAATAGAGTTGCTGCAAAATGGAAAACATCCTTAACAGTATCTGGTCTTGTTACTGGTATTGCTTTTTGGCACTACTTGTATATGAGGGGAGTCTGGGTAGAGACTGGTGAATCACCAACTGTATTCAGATATATTGACTGGCTACTAACAGTACCATTATTAATATGTGAGTTCTACTTAATACTTGCAGCTGCAACTAATGTTGCTGGTTCCTTGTTTAAAAAGCTATTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCAGCTTGGCCTGCATTCATTGTTGGGCGCTTAGCTTGGGTCTACATGATTTATGAGCTATGGGCTGGTGAAGGAAAATCTGCATGTAATACTGCAAGTCCAGCTGTTCAATCAGCATACAACACAATGATGTATATTATTATCTTTGGTTGGGCCATCTACCCA MLAATAFFIERNRVAAKWKTSLTVSGLVTGIAFWHYLYMRGVWVETGESPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLIGSLVMLVFGYMGEAGIMAAWPAFIVGRLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTCGCCGCTACTGCG---TTCTTTATTGAAAGAAATAGAGTTGCTGCA---AAATGGAAAACATCCTTAACAGTATCTGGTCTTGTTACTGGTATTGCTTTTTGGCACTACTTGTATATGAGGGGAGTCTGGGTA------------------------------GAG---------------------ACTGGTGAATCACCAACTGTATTCAGATATATTGACTGG------------------------CTACTAACAGTACCATTATTAATATGTGAGTTCTACTTAATACTTGCAGCT---------GCA---ACTAATGTTGCTGGT---TCCTTG------------------------------------TTTAAAAAG---CTATTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATTGTTGGGCGCTTAGCTTGGGTCTACATGATTTATGAGCTA---------------TGG------GCT---GGTGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCAGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGTATATTATTATCTTT---------------------------------------------------------------GGTTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATA-FFIERNRVAA-KWKTSLTVSGLVTGIAFWHYLYMRGVWV----------E-------TGESPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIVGRLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_DQ903170 [IV-Gamma5-SAR86c] clone_HB10087_DQ903170 gi|116294069|gb|DQ903170| Uncultured bacterium clone HB10087 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone HB10087 putative proteorhodopsin gene, partial cds. DQ903170 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na East China Sea surface water (ECS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na GTATTAGCGGCTACTGTATTCTTCTTTATTGAAAGAGATAGAGTAGCTGCAAAATGGAAAACATCATTAACAGTATCTGGTCTTGTTACTGGTATTGCTTTTTGGCATTACTTATACATGAGAGGTGTCTGGGTAGAGACTGGTGAATCACCAACTGTATTCAGATATATTGACTGGCTACTAACAGTACCATTATTAATATGTGAGTTCTACTTAATACTTGCAGCTGCAACTAATGTTGCAGGTTCCTTGTTTAAAAAGCTATTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCAGCTTGGCCTGCATTCATTGTTGGGTGCTTAGCTTGGGTCTACATGATTTATGAGCTATGGGCTGGTGAAGGAAAATCTGCATGTAATACTGCAAGTCCGGCTGTTCAATCAGCATACAACACAATGATGTATATTATTATCTTTGGTTGGGCAATTTACCCA VLAATVFFFIERDRVAAKWKTSLTVSGLVTGIAFWHYLYMRGVWVETGESPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLIGSLVMLVFGYMGEAGIMAAWPAFIVGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGGCTACTGTATTCTTCTTTATTGAAAGAGATAGAGTAGCTGCA---AAATGGAAAACATCATTAACAGTATCTGGTCTTGTTACTGGTATTGCTTTTTGGCATTACTTATACATGAGAGGTGTCTGGGTA------------------------------GAG---------------------ACTGGTGAATCACCAACTGTATTCAGATATATTGACTGG------------------------CTACTAACAGTACCATTATTAATATGTGAGTTCTACTTAATACTTGCAGCT---------GCA---ACTAATGTTGCAGGT---TCCTTG------------------------------------TTTAAAAAG---CTATTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATTGTTGGGTGCTTAGCTTGGGTCTACATGATTTATGAGCTA---------------TGG------GCT---GGTGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCGGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGTATATTATTATCTTT---------------------------------------------------------------GGTTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------VLAATVFFFIERDRVAA-KWKTSLTVSGLVTGIAFWHYLYMRGVWV----------E-------TGESPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIVGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EF088605 [IV-Gamma5-SAR86c] E400029_env_samples_EF088605 gi|126843451|gb|EF088605| Uncultured bacterium clone E400029 putative proteorhodopsin gene, partial cds Uncultured bacterium clone E400029 putative proteorhodopsin gene, partial cds EF088605 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na Bering_Sea_surface_water_sample Arctic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na GTGGCCGCTACTGTTTTCTTCTTTATTGAAAGAGATAGAGTTGCTGCAAAGTGGAAAACATCCTTAACAGTATCTGGTCTTGTTACTGGTATTGCTTTTTGGCACTACTTGTATATGAGAGGAGTCTGGGTAGAGACTGGTGAATCACCAACTGTATTCAGATATATTGACTGGCTACTAACAGTACCATTGTTAATATGTGAGTTCTACTTAATACTTGCAGCTGCAACTAATGTTGCTGGTTTCTTGTTTAAAAAGCTATTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCAGCTTGGCCTGCATTCATTGTTGGGTGCTTAGCTTGGGTCTACATGATTTATGAGCTATGGGCTGGTGAAGGAAAATCTGCATGTAATACTGCAAGTCCAGCTGTTCAATCAGCATACAACACAATGATGTATATTATTATCTTTGGATGGGCTATTTATCCA VAATVFFFIERDRVAAKWKTSLTVSGLVTGIAFWHYLYMRGVWVETGESPTVFRYIDWLLTVPLLICEFYLILAAATNVAGFLFKKLLIGSLVMLVFGYMGEAGIMAAWPAFIVGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGGCCGCTACTGTTTTCTTCTTTATTGAAAGAGATAGAGTTGCTGCA---AAGTGGAAAACATCCTTAACAGTATCTGGTCTTGTTACTGGTATTGCTTTTTGGCACTACTTGTATATGAGAGGAGTCTGGGTA------------------------------GAG---------------------ACTGGTGAATCACCAACTGTATTCAGATATATTGACTGG------------------------CTACTAACAGTACCATTGTTAATATGTGAGTTCTACTTAATACTTGCAGCT---------GCA---ACTAATGTTGCTGGT---TTCTTG------------------------------------TTTAAAAAG---CTATTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATTGTTGGGTGCTTAGCTTGGGTCTACATGATTTATGAGCTA---------------TGG------GCT---GGTGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCAGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGTATATTATTATCTTT---------------------------------------------------------------GGATGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------VAATVFFFIERDRVAA-KWKTSLTVSGLVTGIAFWHYLYMRGVWV----------E-------TGESPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-FL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIVGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU915999 [IV-Gamma5-SAR86c] clone_4S3-35_EU915999 gi|229358879|gb|EU915999| Uncultured bacterium clone 4S3-35 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 4S3-35 putative proteorhodopsin gene, partial cds. EU915999 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTGGCCTCTACTGTTTTCTTCTTTATTGAAAGAGATAGAGTTGCTGCAAAATGGAAAACATCCTTAACAGTATCTGGTCTTGTTACTGGTATTGCTTTTTGGCACTACTTGTATATGAGAGGAGTCTGGGTAGGTGAATCACCAACTGTATTCAGATATATTGACTGGCTACTAACAGTACCATTATTAATATGTGAGTTCTACTTAATACTTGCAGCTGCAAATGTTGCTGGTTCCTTGTTTAAAAAGCTATTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCAGCTTGGCCTGCATTCATTGTTGGGTGCTTAGCTTGGGTCTACATGATTTATGAGCTATGGGCTGGTGAAGGAAAATCTGCATGTAATACTGCAAGTCCAGCTGTTCAATCAGCATACAACACAATGATGTAT LASTVFFFIERDRVAAKWKTSLTVSGLVTGIAFWHYLYMRGVWVGESPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLIGSLVMLVFGYMGEAGIMAAWPAFIVGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGCCTCTACTGTTTTCTTCTTTATTGAAAGAGATAGAGTTGCTGCA---AAATGGAAAACATCCTTAACAGTATCTGGTCTTGTTACTGGTATTGCTTTTTGGCACTACTTGTATATGAGAGGAGTCTGGGTA---------------------------------------------------------GGTGAATCACCAACTGTATTCAGATATATTGACTGG------------------------CTACTAACAGTACCATTATTAATATGTGAGTTCTACTTAATACTTGCAGCT---------GCA------AATGTTGCTGGT---TCCTTG------------------------------------TTTAAAAAG---CTATTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATTGTTGGGTGCTTAGCTTGGGTCTACATGATTTATGAGCTA---------------TGG------GCT---GGTGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCAGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGTAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFIERDRVAA-KWKTSLTVSGLVTGIAFWHYLYMRGVWV-------------------GESPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIVGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MY------------------------------------------------------------------------------------------------------------------------------------ [IV-Gamma5-SAR86c]_DQ203353 [IV-Gamma5-SAR86c] MedHO102B10_env_samples_DQ203353 gi|77547154|gb|DQ203353| Uncultured bacterium clone MedHO102B10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102B10 predicted proteorhodopsin gene, partial cds DQ203353 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGACTGGCTACTAACAGTACCATTATTAATATGTGAGTTCTACTTAATACTTGCAGCTGCAACTAATGTTGCTGGTTCCTTGTTTAAAAAGCTATTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCAGCTTGGCCTGCATTCATTGTTGGGTGCTTAGCTTGGGTCTACATGATTTATGAGCTATGGGCTGGTGAAGGAAAATCTGCATGTAATACTGCAAGTCCAGCTGTTCAATCAGCATACAACACAATGATGTATATTATTATCTTTGGTTGGGCCATCTACCCA SYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLIGSLVMLVFGYMGEAGIMAAWPAFIVGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGACTGG------------------------CTACTAACAGTACCATTATTAATATGTGAGTTCTACTTAATACTTGCAGCT---------GCA---ACTAATGTTGCTGGT---TCCTTG------------------------------------TTTAAAAAG---CTATTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATTGTTGGGTGCTTAGCTTGGGTCTACATGATTTATGAGCTA---------------TGG------GCT---GGTGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCAGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGTATATTATTATCTTT---------------------------------------------------------------GGTTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIVGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_DQ203521 [IV-Gamma5-SAR86c] MedHO1202C5_env_samples_DQ203521 gi|77547490|gb|DQ203521| Uncultured bacterium clone MedHO1202C5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202C5 predicted proteorhodopsin gene, partial cds DQ203521 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTATATTGACTGGCTACTAACAGTACCATTATTAATATGTGAGTTTTACTTAATACTTGCAGCTGCAACTAATGTTGCTGGTTCCTTGTTTAAAAAGCTATTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCAGCTTGGCCTGCATTCATTGTTGGGTGCTTAGCTTGGGTCTACATGATTTATGAGCTATGGGCTGGTGAAGGAAAATCTGCATGTAATACTGCAAGTCCAGCTGTTCAATCAGCATACAACACAATGATGTATATTATTATCGTTGGTTGGGCCATTTATCCA RYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLIGSLVMLVFGYMGEAGIMAAWPAFIVGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTATATTGACTGG------------------------CTACTAACAGTACCATTATTAATATGTGAGTTTTACTTAATACTTGCAGCT---------GCA---ACTAATGTTGCTGGT---TCCTTG------------------------------------TTTAAAAAG---CTATTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATTGTTGGGTGCTTAGCTTGGGTCTACATGATTTATGAGCTA---------------TGG------GCT---GGTGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCAGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGTATATTATTATCGTT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIVGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_DQ422265 [IV-Gamma5-SAR86c] clone_med-20m-b12_DQ422265 gi|90024050|gb|DQ422265| Uncultured bacterium clone med-20m-b12 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-b12 putative proteorhodopsin gene, partial cds. DQ422265 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATATATTGACTGGCTACTAACAGTACCATTATTAATATGTGAGTTCTACTTAATACTTGCAGCTGCAACTAATGTTGCTGGTTCCTTGTTTAAAAAGCTATTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCAGCTTGGCCTGCATTCATTATTGGGTGCTTAGCTTGGGTCTACATGATTTATGAGCTATGGGCTGGTGAAGGAAAATCTGCATGTAATACTGCAAGTCCAGCTGTTCAATCAGCATACAACACAATGATGTATATTATTATCGTTGGTTGGGCTATTTATCCA RYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLIGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGACTGG------------------------CTACTAACAGTACCATTATTAATATGTGAGTTCTACTTAATACTTGCAGCT---------GCA---ACTAATGTTGCTGGT---TCCTTG------------------------------------TTTAAAAAG---CTATTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATTATTGGGTGCTTAGCTTGGGTCTACATGATTTATGAGCTA---------------TGG------GCT---GGTGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCAGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGTATATTATTATCGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_AY250723 [IV-Gamma5-SAR86c] Uncultured_bacterium_clone_medA15r11b3_partial_cds_AY250723 gi|29470243|gb|AY250723| Uncultured bacterium clone medA15r11b3 proteorhodopsin gene, partial cds Uncultured bacterium clone medA15r11b3 proteorhodopsin gene, partial cds AY250723 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 20-Apr-2004 #na collected_from_a_depth_of_5_m_at_a_station_in_the_Alboran_Sea_[30_N/4.25_W]_in_May_1998 Mediterranean Sea marine 36 -4.25 Novel Proteorhodopsin variants from the Mediterranean and Red Seas Sabehi,G., Massana,R., Bielawski,J.P., Rosenberg,M., Delong,E.F. and Beja,O. Environ. Microbiol. 5 (10), 842849 (2003) 14510837 PCR amplified from plankton DNA extracts ATGGGTAAACAATTACTGATCTTAGGTAGTGTTATTGCGCTTCCATCTTTTGCTGCTGGCGGTGGCGATCTTGATGCTAGTGACTATACAGGTGTTTCATTCTGGTTAGTTACTGCTGCATTATTAGCCTCAACTGTTTTCTTTTTTATTGAAAGAGACAGAGTTGCTGCAAAATGGAAAACGTCGTTAACAGTATCTGGCCTTGTTACTGGTATTGCTTTTTGGCACTACTTGTATATGAGAGGAGTTTGGGTAGAGACTGGTGAATCACCAACTGTATTCAGATATATTGACTGGTTACTAACAGTACCATTATTAATATGTGAGTTTTACTTAATACTTGCAGCTGCAACTAATGTTGCTGGTTCTTTATTTAAAAAGCTATTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCGGCTTGGCCTGCATTCATTATTGGGTGCTTAGCTTGGGTCTATATGATATATGAGCTATGGGCTGGTGAAGGAAAATCTGCATGTAATACTGCAAGTCCAGCTGTTCAATCAGCATACAACACAATGATGTATATTATTATCTTTGGTTGGGCTATTTACCCTGTAGGTTACTTTACTGGTTACCTAATGGGTGACGGCGGATCTGCCTTAAACTTAAACCTTATCTATAACCTTGCTGACTTCGTTAACAAGATTCTATTTGGTTTAATTATCTGGCATGTTGCTGTTAAAGAATCTTCTAATGCT MGKQLLILGSVIALPSFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFIERDRVAAKWKTSLTVSGLVTGIAFWHYLYMRGVWVETGESPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLIGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWHVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAACAATTACTGATCTTAGGTAGTGTTATTGCGCTTCCATCTTTTGCTGCT------GGCGGTGGCGATCTTGATGCTAGTGACTATACAGGTGTTTCATTCTGGTTAGTTACTGCTGCATTATTAGCCTCAACTGTTTTCTTTTTTATTGAAAGAGACAGAGTTGCTGCA---AAATGGAAAACGTCGTTAACAGTATCTGGCCTTGTTACTGGTATTGCTTTTTGGCACTACTTGTATATGAGAGGAGTTTGGGTA------------------------------GAG---------------------ACTGGTGAATCACCAACTGTATTCAGATATATTGACTGG------------------------TTACTAACAGTACCATTATTAATATGTGAGTTTTACTTAATACTTGCAGCT---------GCA---ACTAATGTTGCTGGT---TCTTTA------------------------------------TTTAAAAAG---CTATTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCGGCT------------------TGGCCTGCA---TTCATTATTGGGTGCTTAGCTTGGGTCTATATGATATATGAGCTA---------------TGG------GCT---GGTGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCAGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGTATATTATTATCTTT---------------------------------------------------------------GGTTGG---------GCTATTTACCCTGTAGGTTACTTTACTGGTTACCTAATG------------------------------------GGTGACGGCGGATCTGCCTTAAACTTAAACCTTATCTATAACCTTGCTGACTTCGTTAACAAGATTCTATTTGGTTTAATTATCTGGCATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MGKQLLILGSVIALPSFAA--GGGDLDASDYTGVSFWLVTAALLASTVFFFIERDRVAA-KWKTSLTVSGLVTGIAFWHYLYMRGVWV----------E-------TGESPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYPVGYFTGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWHVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86c]_EU916004 [IV-Gamma5-SAR86c] clone_4S3-42_EU916004 gi|229358889|gb|EU916004| Uncultured bacterium clone 4S3-42 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 4S3-42 putative proteorhodopsin gene, partial cds. EU916004 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCTTCTACTGTATTCTTCTTTATTGAAAGAGATAGAGTTTCAGCTAAATGGAAGACTTCATTAACAGTATCTGGTCTTGTTACTGGTATTGCTTTTTGGCATTACTTGTACATGAGAGGAGTCTGGGTAGGCGAAACACCAACTGTATTCAGATATATTGACTGGTTACTAACAGTACCTTTATTAATATGTGAATTCTACTTAATACTTGCTGCTGCAAATGTTGCAGGTTCGTTATTTAAGAAACTATTAATTGGTTCTCTTGTAATGCTTGTATTCGGATACATGGGCGAAGCTGGAATAATGGCTGCTATGCCTGCTTTCATTGTTGGAATGTTAGCTTGGATTTACATGATCTATGAACTTTGGGCTGGTGAGGGTAAGTCTGCATGCAATACAGCAAGTCCTGCAGTTCAGTCTGCATACAATACAATGATGTGGATTATTATAGTCGGATGGGCGATA LASTVFFFIERDRVSAKWKTSLTVSGLVTGIAFWHYLYMRGVWVGETPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLIGSLVMLVFGYMGEAGIMAAMPAFIVGMLAWIYMIYELWAGEGKSACNTASPAVQSAYNTMMWIIIVGWAI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCTTCTACTGTATTCTTCTTTATTGAAAGAGATAGAGTTTCAGCT---AAATGGAAGACTTCATTAACAGTATCTGGTCTTGTTACTGGTATTGCTTTTTGGCATTACTTGTACATGAGAGGAGTCTGGGTA---------------------------------------------------------GGCGAAACACCAACTGTATTCAGATATATTGACTGG------------------------TTACTAACAGTACCTTTATTAATATGTGAATTCTACTTAATACTTGCTGCT---------GCA------AATGTTGCAGGT---TCGTTA------------------------------------TTTAAGAAA---CTATTAATTGGTTCTCTTGTAATGCTTGTATTCGGATACATGGGCGAA---------GCT------------------GGA------ATA---------------------------------ATG------------------------------------------------------------------GCTGCT------------------ATGCCTGCT---TTCATTGTTGGAATGTTAGCTTGGATTTACATGATCTATGAACTT---------------TGG------GCT---GGTGAG---GGTAAGTCTGCATGCAAT------ACA---GCAAGTCCTGCAGTT---CAG---TCT---GCA---TAC---AAT---ACAATG---ATGTGGATTATTATAGTC---------------------------------------------------------------GGATGG---------GCGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFIERDRVSA-KWKTSLTVSGLVTGIAFWHYLYMRGVWV-------------------GETPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------MPA-FIVGMLAWIYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MWIIIV---------------------GW---AI---------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU915990 [IV-Gamma5-SAR86c] clone_4S3-56_EU915990 gi|229358861|gb|EU915990| Uncultured bacterium clone 4S3-56 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 4S3-56 putative proteorhodopsin gene, partial cds. EU915990 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCTTCTACTGTATTCTTCTTTATTGAAAGAGATAGAGTTTCAGCTAAATGGAAGACTTCATTAACAGTATCTGGTCTTGTTACTGGTATTGCTTTTTGGCATTACTTGTACATGAGAGGAGTCTGGGTAGGCGAAACACCAACTGTATTCAGATATATTGACTGGTTACTAACAGTACCTTTATTAATATGTGAATTCTACTTAATACTTGCTGCTGCAAATGTTGCAGGTTCGTTATTTAAGAAACTATTAATTGGTTCTCTTGTAATGCTTGTATTCGGATACATGGGCGAAGCTGGAATAATGGCTGCTATGCCTGCTTTCATTGTTGGAATGTTAGCTTGGATTTACATGATCTATGAACTTTGGGCTGGTGAGGGTAAGTCTGCATGCAATACAGCAAGTCCTGCAGTTCAGTCTGCATACAATACAATGATGTGGATTATTATCGTCGGATGGGCT LASTVFFFIERDRVSAKWKTSLTVSGLVTGIAFWHYLYMRGVWVGETPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLIGSLVMLVFGYMGEAGIMAAMPAFIVGMLAWIYMIYELWAGEGKSACNTASPAVQSAYNTMMWIIIVGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCTTCTACTGTATTCTTCTTTATTGAAAGAGATAGAGTTTCAGCT---AAATGGAAGACTTCATTAACAGTATCTGGTCTTGTTACTGGTATTGCTTTTTGGCATTACTTGTACATGAGAGGAGTCTGGGTA---------------------------------------------------------GGCGAAACACCAACTGTATTCAGATATATTGACTGG------------------------TTACTAACAGTACCTTTATTAATATGTGAATTCTACTTAATACTTGCTGCT---------GCA------AATGTTGCAGGT---TCGTTA------------------------------------TTTAAGAAA---CTATTAATTGGTTCTCTTGTAATGCTTGTATTCGGATACATGGGCGAA---------GCT------------------GGA------ATA---------------------------------ATG------------------------------------------------------------------GCTGCT------------------ATGCCTGCT---TTCATTGTTGGAATGTTAGCTTGGATTTACATGATCTATGAACTT---------------TGG------GCT---GGTGAG---GGTAAGTCTGCATGCAAT------ACA---GCAAGTCCTGCAGTT---CAG---TCT---GCA---TAC---AAT---ACAATG---ATGTGGATTATTATCGTC---------------------------------------------------------------GGATGG---------GCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFIERDRVSA-KWKTSLTVSGLVTGIAFWHYLYMRGVWV-------------------GETPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------MPA-FIVGMLAWIYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MWIIIV---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU915964 [IV-Gamma5-SAR86c] clone_H8-13_EU915964 gi|229358810|gb|EU915964| Uncultured bacterium clone H8-13 putative proteorhodopsin-like gene, partial sequence. Uncultured bacterium clone H8-13 putative proteorhodopsin-like gene, partial sequence. EU915964 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na GGCGACCTAGATACTGGTGATTACTGGTGTATCTTTTTGGTTGGTGACTGCTGCGTTGTTAGCTTCTACTGTATTCTTTTTTATTTGGAAAGAGATAGAGTTTCAGCTAAATGGAAGACTTCATTAACAGTATCCGGTCTTGTTACTGGTATTGCTTTTTGGCATTACTTGTACATGAGAGGAGTCTGGGTAGAGACTGGTGAAACACCAACTGTATTCAGATATATTGACTGGTTACTAACAGTACCTTTATTAATATGTGAATTCTACTTAATACTTGCTGCTGCAACCAATGTTGCAGGTTCTTTATTTAAGAAACTATTAATTGGTTCTCTTGTAATGCTTGTATTCGGATATATGGGCGAAGCTGGAATAATGGCAGCTATGCCTGCTTTCATTGTTGGAATGTTAGCTTGGATTTACATGATCTATGAGCTATGGGCTGGTGAAGGTAAGTCTGCATGCAATACAGCAAGTCCTGCGGTTCAATCTGCATACAACACAATGATGTGGATTATCGTAGTAGGATGGGCGAT GDLDTGDYWCIFLVGDCCVVSFYCILFYLERDRVSAKWKTSLTVSGLVTGIAFWHYLYMRGVWVETGETPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLIGSLVMLVFGYMGEAGIMAAMPAFIVGMLAWIYMIYELWAGEGKSACNTASPAVQSAYNTMMWIIVVGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCGACCTAGATACTGGTGATTACTGGTGTATCTTTTTGGTTGGTGACTGCTGCGTTGTTAGCTTCTACTGTATTCTTTTTTATTTGGAAAGAGATAGAGTTTCAGCT---AAATGGAAGACTTCATTAACAGTATCCGGTCTTGTTACTGGTATTGCTTTTTGGCATTACTTGTACATGAGAGGAGTCTGGGTA------------------------------GAG---------------------ACTGGTGAAACACCAACTGTATTCAGATATATTGACTGG------------------------TTACTAACAGTACCTTTATTAATATGTGAATTCTACTTAATACTTGCTGCT---------GCA---ACCAATGTTGCAGGT---TCTTTA------------------------------------TTTAAGAAA---CTATTAATTGGTTCTCTTGTAATGCTTGTATTCGGATATATGGGCGAA---------GCT------------------GGA------ATA---------------------------------ATG------------------------------------------------------------------GCAGCT------------------ATGCCTGCT---TTCATTGTTGGAATGTTAGCTTGGATTTACATGATCTATGAGCTA---------------TGG------GCT---GGTGAA---GGTAAGTCTGCATGCAAT------ACA---GCAAGTCCTGCGGTT---CAA---TCT---GCA---TAC---AAC---ACAATG---ATGTGGATTATCGTAGTA---------------------------------------------------------------GGATGG---------GCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------GDLDTGDYWCIFLVGDCCVVSFYCILFYLERDRVSA-KWKTSLTVSGLVTGIAFWHYLYMRGVWV----------E-------TGETPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------MPA-FIVGMLAWIYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MWIIVV---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_EU915977 [IV-Gamma5-SAR86c] clone_H10-13_EU915977 gi|229358835|gb|EU915977| Uncultured bacterium clone H10-13 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone H10-13 putative proteorhodopsin gene, partial cds. EU915977 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTAGCATCTACTGTATTTTTCTTTGTCGAAAGAGATAGAGTTTCTGCTAAATGGAAAACATCACTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTATATGAGAGGAGTATGGATTGGTGATTCACCAACTGTATTTAGATACATTGATTGGTTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCCGCAAATGTTGCTGGTTCCTTGTTTAAAAAGCTATTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCAGCTTGGCCTGCATTCATTGTTGGGTGCTTAGCTTGGGTCTACATGATTTATGAGCTATGGGCTGGTGAAGGAAAATCTGCATGTAATACTGCAAGTCCAGCTGTTCAATCAGCATACAACACAATGATGTATATTATCATAGTCGGATGGGCG LASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIGDSPTVFRYIDWLLTVPLLICEFYLILAAANVAGSLFKKLLIGSLVMLVFGYMGEAGIMAAWPAFIVGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIVGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGCATCTACTGTATTTTTCTTTGTCGAAAGAGATAGAGTTTCTGCT---AAATGGAAAACATCACTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTCTGGCATTACATGTATATGAGAGGAGTATGGATT---------------------------------------------------------GGTGATTCACCAACTGTATTTAGATACATTGATTGG------------------------TTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCC---------GCA------AATGTTGCTGGT---TCCTTG------------------------------------TTTAAAAAG---CTATTAATTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATTGTTGGGTGCTTAGCTTGGGTCTACATGATTTATGAGCTA---------------TGG------GCT---GGTGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCAGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGTATATTATCATAGTC---------------------------------------------------------------GGATGG---------GCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYMYMRGVWI-------------------GDSPTVFRYIDW--------LLTVPLLICEFYLILAA---A--NVAG-SL------------FKK-LLIGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIVGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIV---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_1105098063598 [IV-Gamma5-SAR86c] JCVI_ORF_1105098063598 jcvi|1105098063598| 1105098063598 JCVI ORF 1105098063598 1105098063598 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 22-AUG-2003 Coastal/2m_depth/S_28.3_psu/GS004/Outside_Halifax/Nova_Scotia/North_American_East_Coast Atlantic Ocean marine 44.137222 -63.644444 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATTGAGTTTCTGCTATGGAACACTTCTTTAACAGTATCTGGTTTAGTTACTGGTATTGCTTTTTGGCATTACTTATACATGAGAGGTGTATGGGTTGAAACTGGTGAATCACCAACTGTATTTAGATATATAGATTGGTTACTTACAGTTCCATTACTAATCTGCGAATTTTATTTAATTCTAGCTGCTGCAACTAATGTAGCTGGATCATTATTTAAGAAACTACTTGTTGGCTCACTTGTTATGCTTGTGTTTGGATACATGGGTGAAGCACGAATCATGGCACCTTGGCCTGCATTCATTATTGGGTGTTTAGCATGGGTATACATGATTTATGAACTATGGGCTGGAGAAGGAAAGTCTGCATGCAATACTGCAAGTCCTGCTGTACAGTCAGCTTACAACACTATGATGTATATCATTATCATTGGTTGGGCTATTTATCCTGTTGGATACTTCCCTGGTTACCTAATGGGTGATGGGGGATCAGCTCTAAATTTAAACCTTATATATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTCTTATAATTTGGAATGTTGCTGTAAAACAATCATCTAACGCT IEFLLWNTSLTVSGLVTGIAFWHYLYMRGVWVETGESPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEARIMAPWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIIGWAIYPVGYFPGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKQSSNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGAGTTTCTG---CTATGGAACACTTCTTTAACAGTATCTGGTTTAGTTACTGGTATTGCTTTTTGGCATTACTTATACATGAGAGGTGTATGGGTT------------------------------GAA---------------------ACTGGTGAATCACCAACTGTATTTAGATATATAGATTGG------------------------TTACTTACAGTTCCATTACTAATCTGCGAATTTTATTTAATTCTAGCTGCT---------GCA---ACTAATGTAGCTGGA---TCATTA------------------------------------TTTAAGAAA---CTACTTGTTGGCTCACTTGTTATGCTTGTGTTTGGATACATGGGTGAA---------GCA------------------CGA------ATC---------------------------------ATG------------------------------------------------------------------GCACCT------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCATGGGTATACATGATTTATGAACTA---------------TGG------GCT---GGAGAA---GGAAAGTCTGCATGCAAT------ACT---GCAAGTCCTGCTGTA---CAG---TCA---GCT---TAC---AAC---ACTATG---ATGTATATCATTATCATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCTGTTGGATACTTCCCTGGTTACCTAATG------------------------------------GGTGATGGGGGATCAGCTCTAAATTTAAACCTTATATATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTCTTATAATTTGGAATGTTGCTGTAAAACAA---TCATCTAACGCT--------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------IEFL-LWNTSLTVSGLVTGIAFWHYLYMRGVWV----------E-------TGESPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------R--I-----------M----------------------AP------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIII---------------------GW---AIYPVGYFPGYLM------------GDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKQ-SSNA------------------------------------- [IV-Gamma5-SAR86c]_AY250724 [IV-Gamma5-SAR86c] clone_medA15_r8_1_partial_AY250724 gi|38202251|gb|AY250724| Uncultured bacterium clone medA15 r8 1 proteorhodopsin gene, partial cds Uncultured bacterium clone medA15 r8 1 proteorhodopsin gene, partial cds AY250724 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 20-Apr-2004 #na collected_from_a_depth_of_5_m_at_a_station_in_the_Alboran_Sea_[30_N/4.25_W]_in_May_1998 Mediterranean Sea marine 36 -4.25 Novel Proteorhodopsin variants from the Mediterranean and Red Seas Sabehi,G., Massana,R., Bielawski,J.P., Rosenberg,M., Delong,E.F. and Beja,O. Environ. Microbiol. 5 (10), 842849 (2003) 14510837 PCR amplified from plankton DNA extracts ATGGGTAAATTATTAATGATGTTAGGTAGTGTTATTGCGCTTCCTTCATTTGCGGCAAGTGGTGGCGATTTGGATGCTAGTGATTACACTGGTGTTTCATTTTGGTTGGTTACTGCAGCTTTATTAGCTTCAACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCTAAATGGAAGACATCTTTGACAGTATCAGGTTTAGTTACTGGTATTGCTTTTTGGCATTACTTATATATGAGAGGTGTATGGGTTGAAACTGGTGAAACTCCAACAGTATTTAGATATATTGATTGGTTATTAACTGTTCCATTACTAATCTGCGAGTTTTATTTAATTCTAGCTGCTGCAACTAACGTAGCTGGTTCATTATTTAAGAAACTACTTGTTGGTTCACTTGTAATGCTTGTGTTTGGATACATGGGTGAAGCAGGAATCATGGCAGCTTTGCCTGCATTCATTATTGGGTGTTTGGCATGGATATATATGATTTATGAGCTTTGGGCTGGAGAAGGGAAATCTGCATGCAATACTGCAAGTCCTGCCGTTCAATCAGCTTACAACACCATGATGTACATCATCATTTTTGGTTGGTTAATCTATCCAGTTGGTTATGCATCAGGCTATCTAATGGGCGATGGCGGATCAGCTATGAACTTAAACTTAATATATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATCTGGAATGTTGCTGTTAAAGAATCTTCTAAT MGKLLMMLGSVIALPSFAASGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYLYMRGVWVETGETPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAALPAFIIGCLAWIYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWLIYPVGYASGYLMGDGGSAMNLNLIYNLADFVNKILFGLIIWNVAVKESSN ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAATTATTAATGATGTTAGGTAGTGTTATTGCGCTTCCTTCATTTGCGGCA------AGTGGTGGCGATTTGGATGCTAGTGATTACACTGGTGTTTCATTTTGGTTGGTTACTGCAGCTTTATTAGCTTCAACTGTATTTTTCTTTGTTGAAAGAGATAGAGTTTCTGCT---AAATGGAAGACATCTTTGACAGTATCAGGTTTAGTTACTGGTATTGCTTTTTGGCATTACTTATATATGAGAGGTGTATGGGTT------------------------------GAA---------------------ACTGGTGAAACTCCAACAGTATTTAGATATATTGATTGG------------------------TTATTAACTGTTCCATTACTAATCTGCGAGTTTTATTTAATTCTAGCTGCT---------GCA---ACTAACGTAGCTGGT---TCATTA------------------------------------TTTAAGAAA---CTACTTGTTGGTTCACTTGTAATGCTTGTGTTTGGATACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TTGCCTGCA---TTCATTATTGGGTGTTTGGCATGGATATATATGATTTATGAGCTT---------------TGG------GCT---GGAGAA---GGGAAATCTGCATGCAAT------ACT---GCAAGTCCTGCCGTT---CAA---TCA---GCT---TAC---AAC---ACCATG---ATGTACATCATCATTTTT---------------------------------------------------------------GGTTGG---------TTAATCTATCCAGTTGGTTATGCATCAGGCTATCTAATG------------------------------------GGCGATGGCGGATCAGCTATGAACTTAAACTTAATATATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAATTATCTGGAATGTTGCTGTTAAAGAA---TCTTCTAAT------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------MGKLLMMLGSVIALPSFAA--SGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSA-KWKTSLTVSGLVTGIAFWHYLYMRGVWV----------E-------TGETPTVFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------LPA-FIIGCLAWIYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---LIYPVGYASGYLM------------GDGGSAMNLNLIYNLADFVNKILFGLIIWNVAVKE-SSN-------------------------------------- [IV-Gamma5]_JX863332 [IV-Gamma5] MALINA_OTU57_357_L_env_samples_JX863332 gi|425477614|gb|JX863332| Uncultured bacterium clone MALINA OTU57 357 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU57 357 L putative proteorhodopsin mRNA, partial cds JX863332 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 02Aug2009 3m_depth Arctic Ocean marine 69.61 -138.23 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTATTAACGGTTCCCTTATTAATATGTGAATTCTATTTAATACTTGCAGCAGCTACAAACGTTGCTGGCTCATTATTTAAGAAATTGCTTGCTGGATCTTTAGTAATGCTAATTTTTGGATACCTAGGTGAAGCAGGAATTATGGCTGCATTACCAGCATTTATCATCGGATGTCTTGCATGGGTGTATATGATTTACGAGCTATGGTTCGGCGAGGGAAAAGCGGCTAGCAATACTGCAAGCCCTGCTGTTCAATCAGCATACAACGCCATGATGTGGATTATTATAGTA WLLTVPLLICEFYLILAAATNVAGSLFKKLLAGSLVMLIFGYLGEAGIMAALPAFIIGCLAWVYMIYELWFGEGKAASNTASPAVQSAYNAMMWIIIV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTATTAACGGTTCCCTTATTAATATGTGAATTCTATTTAATACTTGCAGCA---------GCT---ACAAACGTTGCTGGC---TCATTA------------------------------------TTTAAGAAA---TTGCTTGCTGGATCTTTAGTAATGCTAATTTTTGGATACCTAGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TTACCAGCA---TTTATCATCGGATGTCTTGCATGGGTGTATATGATTTACGAGCTA---------------TGG------TTC---GGCGAG---GGAAAAGCGGCTAGCAAT------ACT---GCAAGCCCTGCTGTT---CAA---TCA---GCA---TAC---AAC---GCCATG---ATGTGGATTATTATAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLAGSLVMLIFGYLGE---A------G--I-----------M----------------------AA------LPA-FIIGCLAWVYMIYEL-----W--F-GE-GKAASN--T-ASPAV-Q-S-A-Y-N-AM-MWIIIV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5]_AY250725 [IV-Gamma5] Uncultured_bacterium_clone_medA17R9_1_partial_cds_AY250725 gi|29470247|gb|AY250725| Uncultured bacterium clone medA17R9 1 proteorhodopsin gene, partial cds Uncultured bacterium clone medA17R9 1 proteorhodopsin gene, partial cds AY250725 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 20-Apr-2004 #na collected_from_a_depth_of_50_m_at_a_station_in_the_Alboran_Sea_[30_N/4.25_W]_in_May_1998 Mediterranean Sea marine 36 -4.25 Novel Proteorhodopsin variants from the Mediterranean and Red Seas Sabehi,G., Massana,R., Bielawski,J.P., Rosenberg,M., Delong,E.F. and Beja,O. Environ. Microbiol. 5 (10), 842849 (2003) 14510837 PCR amplified from plankton DNA extracts ATGGGTAAAGGATTACTGATGTTAGGTAGTGTTATTGCACTTCCATCCTTTGCAGCTGGTGGAGGCAACTTAAATGCAGCTGATGTAACTGGTGTATCTTTTTGGCTAGTTACTGCCGCTTTACTTGCTTCAACAGTATTCTTTTTTATTGAAAGAGATAGAGTTTCTGCAAAATGGAAGACATCACTAACAGTATCTGGTTTAGTTACTGGTATTGCTTTTTGGCATTACCTTTACATGAGAGGTGTTTGGGTTGATTCTTGGAATCCTGAAACAGGAATGGGAGAATCTCCAACTGAATTTAGATATATTGATTGGTTACTAACAGTACCTTTATTAATTTGTGAGTTTTATCTAATATTAGCTGCTGCAACAAATGTTGCTGGTTCATTATTCAAAAAATTATTAGTTGGTTCATTGGTCATGCTTATTGCAGGATACATGGGTGAATCTGGTAATGCCAATGTGATGATTGCATTCGTAGTTGGATGCTTAGCATGGTTGTATATGATATATGAATTGTGGGCTGGTGAAGGTAAAGCAGCTTGCAATACAGCAAGCCCTGCTGTTCAATCAGCATACAATACAATGATGTGGATCATTATTGTAGGTTGGGCTATATATCCTGCTGGATATGCTGCTGGCTATTTGATGGGTGGAGAAAGCGTTTATGCTTCTAACCTTAACCTGATATATAACCTTGCTGACTTTGTTAACAAGATTTTATTTGGTTTAATCATTTGGCATGTTGCTGTTAAAGAATCTTCTAATGCT MGKGLLMLGSVIALPSFAAGGGNLNAADVTGVSFWLVTAALLASTVFFFIERDRVSAKWKTSLTVSGLVTGIAFWHYLYMRGVWVDSWNPETGMGESPTEFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLIAGYMGESGNANVMIAFVVGCLAWLYMIYELWAGEGKAACNTASPAVQSAYNTMMWIIIVGWAIYPAGYAAGYLMGGESVYASNLNLIYNLADFVNKILFGLIIWHVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAAGGATTACTGATGTTAGGTAGTGTTATTGCACTTCCATCCTTTGCAGCT------GGTGGAGGCAACTTAAATGCAGCTGATGTAACTGGTGTATCTTTTTGGCTAGTTACTGCCGCTTTACTTGCTTCAACAGTATTCTTTTTTATTGAAAGAGATAGAGTTTCTGCA---AAATGGAAGACATCACTAACAGTATCTGGTTTAGTTACTGGTATTGCTTTTTGGCATTACCTTTACATGAGAGGTGTTTGGGTT------------------------------GATTCTTGGAATCCTGAAACAGGAATGGGAGAATCTCCAACTGAATTTAGATATATTGATTGG------------------------TTACTAACAGTACCTTTATTAATTTGTGAGTTTTATCTAATATTAGCTGCT---------GCA---ACAAATGTTGCTGGT---TCATTA------------------------------------TTCAAAAAA---TTATTAGTTGGTTCATTGGTCATGCTTATTGCAGGATACATGGGTGAA---------TCT------------------GGT------AAT---------------------------------GCC------------------------------------------------------------------AATGTG------------------ATGATTGCA---TTCGTAGTTGGATGCTTAGCATGGTTGTATATGATATATGAATTG---------------TGG------GCT---GGTGAA---GGTAAAGCAGCTTGCAAT------ACA---GCAAGCCCTGCTGTT---CAA---TCA---GCA---TAC---AAT---ACAATG---ATGTGGATCATTATTGTA---------------------------------------------------------------GGTTGG---------GCTATATATCCTGCTGGATATGCTGCTGGCTATTTGATG---GGT------------------------------GGAGAAAGCGTTTATGCTTCTAACCTTAACCTGATATATAACCTTGCTGACTTTGTTAACAAGATTTTATTTGGTTTAATCATTTGGCATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MGKGLLMLGSVIALPSFAA--GGGNLNAADVTGVSFWLVTAALLASTVFFFIERDRVSA-KWKTSLTVSGLVTGIAFWHYLYMRGVWV----------DSWNPETGMGESPTEFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLIAGYMGE---S------G--N-----------A----------------------NV------MIA-FVVGCLAWLYMIYEL-----W--A-GE-GKAACN--T-ASPAV-Q-S-A-Y-N-TM-MWIIIV---------------------GW---AIYPAGYAAGYLM-G----------GESVYASNLNLIYNLADFVNKILFGLIIWHVAVKE-SSNA------------------------------------- [IV-Gamma5]_AY250726 [IV-Gamma5] clone_medA15r8b9_partial_AY250726 gi|29470249|gb|AY250726| Uncultured bacterium clone medA15r8b9 proteorhodopsin gene, partial cds Uncultured bacterium clone medA15r8b9 proteorhodopsin gene, partial cds AY250726 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 20-Apr-2004 #na collected_from_a_depth_of_5_m_at_a_station_in_the_Alboran_Sea_[30_N/4.25_W]_in_May_1998 Mediterranean Sea marine 36 -4.25 Novel Proteorhodopsin variants from the Mediterranean and Red Seas Sabehi,G., Massana,R., Bielawski,J.P., Rosenberg,M., Delong,E.F. and Beja,O. Environ. Microbiol. 5 (10), 842849 (2003) 14510837 PCR amplified from plankton DNA extracts ATGGGTAAATTATTAGTGATGTTAGGTAGTGTTATTGCACTTCCATCCTTTGCAGCTGGTGGAGGTAACTTAGATGCAGCTGATGTAACTGGTGTATCTTTTTGGCTAGTTACTGCGGCTTTACTTGCTTCAACAGTATTCTTTTTTATTGAAAGAGATAGAGTTTCTGCAAAATGGAAGACATCACTAACAGTATCTGGTTTAGTTACTGGTATTGCATTTTGGCATTACCTTTATATGAGAGGCGTTTGGGTTGATTCTTGGACTGGTCCAGGAACCGGAGAATCTCCAACTGAATTTAGATATATTGATTGGTTACTAACAGTACCTTTATTAATTTGTGAGTTTTATCTAATATTAGCTGCTGCAACAAATGTTGCTGGTTCATTATTCAAAAAATTATTAGTTGGTTCATTGGTCATGCTTATTGCAGGATACATGGGTGAATCTGGTAATGCCAATGTGATGATTGCATTCGTAGTTGGATGCTTAGCATGGTTGTATATGATATATGAATTGTGGGCTGGTGAAGGTAAAGCAGCTTGCAATACAGCAAGCCCTGCTGTTCAATCAGCATACAATACAATGATGTGGATCATTATTGTAGGTTGGGCTATATATCCTGCTGGATATGCTGCTGGCTATTTGATGGGTGGAGAAAGCGTTTATGCTTCTAACCTTAACCTGATATATAACCTTGCTGACTTTGTTAACAAGATTTTATTTGGTTTAATCATTTGGCATGTTGCTGTTAAAGAATCTTCTAATGCT MGKLLVMLGSVIALPSFAAGGGNLDAADVTGVSFWLVTAALLASTVFFFIERDRVSAKWKTSLTVSGLVTGIAFWHYLYMRGVWVDSWTGPGTGESPTEFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLIAGYMGESGNANVMIAFVVGCLAWLYMIYELWAGEGKAACNTASPAVQSAYNTMMWIIIVGWAIYPAGYAAGYLMGGESVYASNLNLIYNLADFVNKILFGLIIWHVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAATTATTAGTGATGTTAGGTAGTGTTATTGCACTTCCATCCTTTGCAGCT------GGTGGAGGTAACTTAGATGCAGCTGATGTAACTGGTGTATCTTTTTGGCTAGTTACTGCGGCTTTACTTGCTTCAACAGTATTCTTTTTTATTGAAAGAGATAGAGTTTCTGCA---AAATGGAAGACATCACTAACAGTATCTGGTTTAGTTACTGGTATTGCATTTTGGCATTACCTTTATATGAGAGGCGTTTGGGTT------------------------------GATTCTTGGACT---GGTCCAGGAACCGGAGAATCTCCAACTGAATTTAGATATATTGATTGG------------------------TTACTAACAGTACCTTTATTAATTTGTGAGTTTTATCTAATATTAGCTGCT---------GCA---ACAAATGTTGCTGGT---TCATTA------------------------------------TTCAAAAAA---TTATTAGTTGGTTCATTGGTCATGCTTATTGCAGGATACATGGGTGAA---------TCT------------------GGT------AAT---------------------------------GCC------------------------------------------------------------------AATGTG------------------ATGATTGCA---TTCGTAGTTGGATGCTTAGCATGGTTGTATATGATATATGAATTG---------------TGG------GCT---GGTGAA---GGTAAAGCAGCTTGCAAT------ACA---GCAAGCCCTGCTGTT---CAA---TCA---GCA---TAC---AAT---ACAATG---ATGTGGATCATTATTGTA---------------------------------------------------------------GGTTGG---------GCTATATATCCTGCTGGATATGCTGCTGGCTATTTGATG---GGT------------------------------GGAGAAAGCGTTTATGCTTCTAACCTTAACCTGATATATAACCTTGCTGACTTTGTTAACAAGATTTTATTTGGTTTAATCATTTGGCATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MGKLLVMLGSVIALPSFAA--GGGNLDAADVTGVSFWLVTAALLASTVFFFIERDRVSA-KWKTSLTVSGLVTGIAFWHYLYMRGVWV----------DSWT-GPGTGESPTEFRYIDW--------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLIAGYMGE---S------G--N-----------A----------------------NV------MIA-FVVGCLAWLYMIYEL-----W--A-GE-GKAACN--T-ASPAV-Q-S-A-Y-N-TM-MWIIIV---------------------GW---AIYPAGYAAGYLM-G----------GESVYASNLNLIYNLADFVNKILFGLIIWHVAVKE-SSNA------------------------------------- [IV-Gamma5]_DQ203504 [IV-Gamma5] MedHO1202B10_env_samples_DQ203504 gi|77547456|gb|DQ203504| Uncultured bacterium clone MedHO1202B10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202B10 predicted proteorhodopsin gene, partial cds DQ203504 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATACATTGATTGGCTACTAACAGTACCTTTATTAATAGTAGAATTCTACTTAATTCTTGCAGCTGCTACTAACGTTGCTGGTTCTTCATTTAAGAAACTGCTTGCTGGTTCAATAGTAATGCTTGTTGCAGGATATTTAGGTGAAGCAGGTGTATGGCCAGCTATGCCAGCATTCTTACTTGGAATGGCGGCTTGGATTTATATGATTTATGAACTTTGGATGGGTGAAGGTAAAGCAGCCTGCAATACTGCAAGCCCAGCAGTTCAATCAGCATATAATGCAATGATGAAGATTATCATTGTTGGTTGGGCCATATATCCA RYIDWLLTVPLLIVEFYLILAAATNVAGSSFKKLLAGSIVMLVAGYLGEAGVWPAMPAFLLGMAAWIYMIYELWMGEGKAACNTASPAVQSAYNAMMKIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATTGATTGG------------------------CTACTAACAGTACCTTTATTAATAGTAGAATTCTACTTAATTCTTGCAGCT---------GCT---ACTAACGTTGCTGGT---TCTTCA------------------------------------TTTAAGAAA---CTGCTTGCTGGTTCAATAGTAATGCTTGTTGCAGGATATTTAGGTGAA---------GCA------------------GGT------GTA---------------------------------TGG------------------------------------------------------------------CCAGCT------------------ATGCCAGCA---TTCTTACTTGGAATGGCGGCTTGGATTTATATGATTTATGAACTT---------------TGG------ATG---GGTGAA---GGTAAAGCAGCCTGCAAT------ACT---GCAAGCCCAGCAGTT---CAA---TCA---GCA---TAT---AAT---GCAATG---ATGAAGATTATCATTGTT---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLIVEFYLILAA---A-TNVAG-SS------------FKK-LLAGSIVMLVAGYLGE---A------G--V-----------W----------------------PA------MPA-FLLGMAAWIYMIYEL-----W--M-GE-GKAACN--T-ASPAV-Q-S-A-Y-N-AM-MKIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5]_DQ203533 [IV-Gamma5] MedHO1202D6_env_samples_DQ203533 gi|77547514|gb|DQ203533| Uncultured bacterium clone MedHO1202D6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202D6 predicted proteorhodopsin gene, partial cds DQ203533 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTACTAACAGTACCTTTATTAATAGTAGAATTCTACTTAATTCTTGCAGCTGCTACTAACGTTGCTGGTTCTTTATTTAAGAAACTGCTTGCTGGTTCAATAGTAATGCTTGTTGCAGGATATTTAGGTGAAGCAGGTGTATGGCCAGCTATGCCAGCATTCTTACTTGGAATGGCGGCTTGGATTTATATGATTTATGAACTTTGGATGGGTGAAGGTAAAGCAGCCTGCAATACTGCAAGCCCAGCAGTTCAATCAGCATATAATGCAATGATGAAGATTATCATTGTTGGTTGGGCCATATATCCA RYIDWLLTVPLLIVEFYLILAAATNVAGSLFKKLLAGSIVMLVAGYLGEAGVWPAMPAFLLGMAAWIYMIYELWMGEGKAACNTASPAVQSAYNAMMKIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTACTAACAGTACCTTTATTAATAGTAGAATTCTACTTAATTCTTGCAGCT---------GCT---ACTAACGTTGCTGGT---TCTTTA------------------------------------TTTAAGAAA---CTGCTTGCTGGTTCAATAGTAATGCTTGTTGCAGGATATTTAGGTGAA---------GCA------------------GGT------GTA---------------------------------TGG------------------------------------------------------------------CCAGCT------------------ATGCCAGCA---TTCTTACTTGGAATGGCGGCTTGGATTTATATGATTTATGAACTT---------------TGG------ATG---GGTGAA---GGTAAAGCAGCCTGCAAT------ACT---GCAAGCCCAGCAGTT---CAA---TCA---GCA---TAT---AAT---GCAATG---ATGAAGATTATCATTGTT---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLIVEFYLILAA---A-TNVAG-SL------------FKK-LLAGSIVMLVAGYLGE---A------G--V-----------W----------------------PA------MPA-FLLGMAAWIYMIYEL-----W--M-GE-GKAACN--T-ASPAV-Q-S-A-Y-N-AM-MKIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5]_DQ203387 [IV-Gamma5] MedHO102E10_env_samples_DQ203387 gi|77547222|gb|DQ203387| Uncultured bacterium clone MedHO102E10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102E10 predicted proteorhodopsin gene, partial cds DQ203387 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATAGACTGGCTACTAACAGTACCTTTATTAATAGTAGAATTCTACTTAATTCTTGCAGCTGCTACTAACGTTGCTGGTTCTTTATTTAAGAAACTGCTTGCTGGTTCAATAGTAATGCTTGTTGCAGGATATTTAGGTGAAGCAGGTGTATGGCCAGCTATGCCAGCATTCTTACTTGGAATGGCGGCTTGGATTTATATGATTTATGAACTTTGGATGGGTGAAGGTAAAGCAGCCTGCAATACTGCAAGCCCAGCAGTTCAATCAGCATATAATGCAATGATGAAGATTATCATTGTTGGTTGGGCCATTTACCCA SYIDWLLTVPLLIVEFYLILAAATNVAGSLFKKLLAGSIVMLVAGYLGEAGVWPAMPAFLLGMAAWIYMIYELWMGEGKAACNTASPAVQSAYNAMMKIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATAGACTGG------------------------CTACTAACAGTACCTTTATTAATAGTAGAATTCTACTTAATTCTTGCAGCT---------GCT---ACTAACGTTGCTGGT---TCTTTA------------------------------------TTTAAGAAA---CTGCTTGCTGGTTCAATAGTAATGCTTGTTGCAGGATATTTAGGTGAA---------GCA------------------GGT------GTA---------------------------------TGG------------------------------------------------------------------CCAGCT------------------ATGCCAGCA---TTCTTACTTGGAATGGCGGCTTGGATTTATATGATTTATGAACTT---------------TGG------ATG---GGTGAA---GGTAAAGCAGCCTGCAAT------ACT---GCAAGCCCAGCAGTT---CAA---TCA---GCA---TAT---AAT---GCAATG---ATGAAGATTATCATTGTT---------------------------------------------------------------GGTTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LLTVPLLIVEFYLILAA---A-TNVAG-SL------------FKK-LLAGSIVMLVAGYLGE---A------G--V-----------W----------------------PA------MPA-FLLGMAAWIYMIYEL-----W--M-GE-GKAACN--T-ASPAV-Q-S-A-Y-N-AM-MKIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5]_DQ422235 [IV-Gamma5] clone_med-0m-h2_DQ422235 gi|90023990|gb|DQ422235| Uncultured bacterium clone med-0m-h2 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-h2 putative proteorhodopsin gene, partial cds. DQ422235 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTACTAACAGTACCTTTATTAATAGTAGAATTCTACTTAATTCTTGCAGCTGCTACTAACGTTGCTGGTTCTTTATTTAAGAAACTGCTTGCTGGTTCAATAGTAATGCTTGTTGCAGGATATTTAGGTGAAGCAGGTGTATGGCCAGCTATGCCAGCATTCTTACTTGGAATGGCGGCTTGGATTTATATGATTTATGAACTTTGGATGGGTGAAGGTAAAGCAGCCTGCAATACTGCAAGCCCAGCAGTTCAATCAGCATATAATGCAATGATGAAGATTATCATTGTTGGTTGGGCTATTTATCCA RYIDWLLTVPLLIVEFYLILAAATNVAGSLFKKLLAGSIVMLVAGYLGEAGVWPAMPAFLLGMAAWIYMIYELWMGEGKAACNTASPAVQSAYNAMMKIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTAACAGTACCTTTATTAATAGTAGAATTCTACTTAATTCTTGCAGCT---------GCT---ACTAACGTTGCTGGT---TCTTTA------------------------------------TTTAAGAAA---CTGCTTGCTGGTTCAATAGTAATGCTTGTTGCAGGATATTTAGGTGAA---------GCA------------------GGT------GTA---------------------------------TGG------------------------------------------------------------------CCAGCT------------------ATGCCAGCA---TTCTTACTTGGAATGGCGGCTTGGATTTATATGATTTATGAACTT---------------TGG------ATG---GGTGAA---GGTAAAGCAGCCTGCAAT------ACT---GCAAGCCCAGCAGTT---CAA---TCA---GCA---TAT---AAT---GCAATG---ATGAAGATTATCATTGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLIVEFYLILAA---A-TNVAG-SL------------FKK-LLAGSIVMLVAGYLGE---A------G--V-----------W----------------------PA------MPA-FLLGMAAWIYMIYEL-----W--M-GE-GKAACN--T-ASPAV-Q-S-A-Y-N-AM-MKIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5]_DQ422343 [IV-Gamma5] clone_med-20m-h8_DQ422343 gi|90024206|gb|DQ422343| Uncultured bacterium clone med-20m-h8 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-h8 putative proteorhodopsin gene, partial cds. DQ422343 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTACTAACAGTACCTTTATTAATAGTAGAATTCTACTTAATTCTTGCAGCTGCTACTAACGTTGCTGGTTCTTTATTTAAGAAACTGCTTGCTGGTTCAATAGTAATGCTTGTTGCAGGATATTTAGGTGAAGCAGGCGTATGGCCAGCTATGCCAGCATTCTTACTTGGAATGGCGGCTTGGATTTATATGATTTATGAACTTCGGATGGGTGAAGGTAAAGCAGCCTGCAATACTGCAAGCCCAGCAGTTCAATCAGCATATAATGCAATGATGAAGATTATCATTGTTGGTTGGGCTATTTATCCA RYIDWLLTVPLLIVEFYLILAAATNVAGSLFKKLLAGSIVMLVAGYLGEAGVWPAMPAFLLGMAAWIYMIYELRMGEGKAACNTASPAVQSAYNAMMKIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTAACAGTACCTTTATTAATAGTAGAATTCTACTTAATTCTTGCAGCT---------GCT---ACTAACGTTGCTGGT---TCTTTA------------------------------------TTTAAGAAA---CTGCTTGCTGGTTCAATAGTAATGCTTGTTGCAGGATATTTAGGTGAA---------GCA------------------GGC------GTA---------------------------------TGG------------------------------------------------------------------CCAGCT------------------ATGCCAGCA---TTCTTACTTGGAATGGCGGCTTGGATTTATATGATTTATGAACTT---------------CGG------ATG---GGTGAA---GGTAAAGCAGCCTGCAAT------ACT---GCAAGCCCAGCAGTT---CAA---TCA---GCA---TAT---AAT---GCAATG---ATGAAGATTATCATTGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLIVEFYLILAA---A-TNVAG-SL------------FKK-LLAGSIVMLVAGYLGE---A------G--V-----------W----------------------PA------MPA-FLLGMAAWIYMIYEL-----R--M-GE-GKAACN--T-ASPAV-Q-S-A-Y-N-AM-MKIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5]_DQ422301 [IV-Gamma5] clone_med-20m-e2_DQ422301 gi|90024122|gb|DQ422301| Uncultured bacterium clone med-20m-e2 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-e2 putative proteorhodopsin gene, partial cds. DQ422301 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTACTAACAGTACCTTTATTAATAGTAGAATTCTACTTAATTCTTGCAGCTGCTACTAACGTTGCTGGTTCTTTATTTAAGAAACTGCTTGCTGGTTCAATAGTAATGCTTGTTGCAGGATATTTAGGTGAAGCAGGTGTATGGCCAGCTATGCCAGCATTCTTACTTGGAATGGCGGCTTGGATTTATATGATTTATGAACTTTGGATGGGTGAAGGTAAAGCAGCCTGCAATACTGCAAGCCCAGCAGTTCAATCAGCATATAATGCAATGATGAAGATTATCATTGTTGGTTGGGCTATTTATCCA RYIDWLLTVPLLIVEFYLILAAATNVAGSLFKKLLAGSIVMLVAGYLGEAGVWPAMPAFLLGMAAWIYMIYELWMGEGKAACNTASPAVQSAYNAMMKIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTAACAGTACCTTTATTAATAGTAGAATTCTACTTAATTCTTGCAGCT---------GCT---ACTAACGTTGCTGGT---TCTTTA------------------------------------TTTAAGAAA---CTGCTTGCTGGTTCAATAGTAATGCTTGTTGCAGGATATTTAGGTGAA---------GCA------------------GGT------GTA---------------------------------TGG------------------------------------------------------------------CCAGCT------------------ATGCCAGCA---TTCTTACTTGGAATGGCGGCTTGGATTTATATGATTTATGAACTT---------------TGG------ATG---GGTGAA---GGTAAAGCAGCCTGCAAT------ACT---GCAAGCCCAGCAGTT---CAA---TCA---GCA---TAT---AAT---GCAATG---ATGAAGATTATCATTGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLIVEFYLILAA---A-TNVAG-SL------------FKK-LLAGSIVMLVAGYLGE---A------G--V-----------W----------------------PA------MPA-FLLGMAAWIYMIYEL-----W--M-GE-GKAACN--T-ASPAV-Q-S-A-Y-N-AM-MKIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5]_DQ422651 [IV-Gamma5] clone_med-tb04-20m-b5_DQ422651 gi|90024822|gb|DQ422651| Uncultured bacterium clone med-tb04-20m-b5 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-b5 putative proteorhodopsin gene, partial cds. DQ422651 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTACTAACAGTACCTTTATTAATAGTAGAATTCTACTTAATTCTTGCAGCTGCTACTAACGTTGCTGGTTCTTTATTTAAGAAACTGCTTGCTGGTTCAATAGTAATGCTTGTTGCAGGATATTTAGGTGAAGCAGGTGTATGGCCAGCTATGCCAGCATTCTTACTTGGAATGGCGGCTTGGATTTATATGATTTATGAACTTTGGATGGGTGAAGGTAAAGCAGCCTGCAATACTGCAAGCCCAGCAGTTCAATCAGCATATAATGCAATGATGAAGATTATCATTGTTGGTTGGGCTATTTATCCA RYIDWLLTVPLLIVEFYLILAAATNVAGSLFKKLLAGSIVMLVAGYLGEAGVWPAMPAFLLGMAAWIYMIYELWMGEGKAACNTASPAVQSAYNAMMKIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTAACAGTACCTTTATTAATAGTAGAATTCTACTTAATTCTTGCAGCT---------GCT---ACTAACGTTGCTGGT---TCTTTA------------------------------------TTTAAGAAA---CTGCTTGCTGGTTCAATAGTAATGCTTGTTGCAGGATATTTAGGTGAA---------GCA------------------GGT------GTA---------------------------------TGG------------------------------------------------------------------CCAGCT------------------ATGCCAGCA---TTCTTACTTGGAATGGCGGCTTGGATTTATATGATTTATGAACTT---------------TGG------ATG---GGTGAA---GGTAAAGCAGCCTGCAAT------ACT---GCAAGCCCAGCAGTT---CAA---TCA---GCA---TAT---AAT---GCAATG---ATGAAGATTATCATTGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLIVEFYLILAA---A-TNVAG-SL------------FKK-LLAGSIVMLVAGYLGE---A------G--V-----------W----------------------PA------MPA-FLLGMAAWIYMIYEL-----W--M-GE-GKAACN--T-ASPAV-Q-S-A-Y-N-AM-MKIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5]_DQ422225 [IV-Gamma5] clone_med-0m-g4_DQ422225 gi|90023970|gb|DQ422225| Uncultured bacterium clone med-0m-g4 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-g4 putative proteorhodopsin gene, partial cds. DQ422225 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTACTAACAGTACCTTTATTAATAGTAGAATTCTACTTAATTCTTGCAGCTGCTACTAACGTTGCTGGTTCTTTATTTAAGAAACTGCTTGCTGGTTCAATAGTAATGCTTGTTGCAGGATATTTAGGTGAAGCAGGTGTATGGCCAGCTATGCCAGCATTCTTACTTGGAATGGCGGCTTGGATTTATATGATTTATGAACTTTGGATGGGTGAAGGTAAAGCAGCCTGCAATACTGCAAGCCCAGCAGTTCAATCAGCATATAATGCAATGATGAAGATTATCATTGTTGGTTGGGCTATTTATCCA RYIDWLLTVPLLIVEFYLILAAATNVAGSLFKKLLAGSIVMLVAGYLGEAGVWPAMPAFLLGMAAWIYMIYELWMGEGKAACNTASPAVQSAYNAMMKIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTAACAGTACCTTTATTAATAGTAGAATTCTACTTAATTCTTGCAGCT---------GCT---ACTAACGTTGCTGGT---TCTTTA------------------------------------TTTAAGAAA---CTGCTTGCTGGTTCAATAGTAATGCTTGTTGCAGGATATTTAGGTGAA---------GCA------------------GGT------GTA---------------------------------TGG------------------------------------------------------------------CCAGCT------------------ATGCCAGCA---TTCTTACTTGGAATGGCGGCTTGGATTTATATGATTTATGAACTT---------------TGG------ATG---GGTGAA---GGTAAAGCAGCCTGCAAT------ACT---GCAAGCCCAGCAGTT---CAA---TCA---GCA---TAT---AAT---GCAATG---ATGAAGATTATCATTGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLIVEFYLILAA---A-TNVAG-SL------------FKK-LLAGSIVMLVAGYLGE---A------G--V-----------W----------------------PA------MPA-FLLGMAAWIYMIYEL-----W--M-GE-GKAACN--T-ASPAV-Q-S-A-Y-N-AM-MKIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5]_DQ422306 [IV-Gamma5] clone_med-20m-e7_DQ422306 gi|90024132|gb|DQ422306| Uncultured bacterium clone med-20m-e7 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-e7 putative proteorhodopsin gene, partial cds. DQ422306 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTACTAACAGTACCTTTATTAATAGTAGAATTCTACTTAATTCTTGCAGCTGCTACTAACGTTGCTGGTTCTTTATTTAAGAAACTGCTTGCTGGTTCAATAGTAATGCTTGTTGCAGGATATTTAGGTGAAGCAGGTGTATGGCCAGCTATGCCAGCATTCTTACTTGGAATGGCGGCTTGGATTTATATGATTTATGAACTTTGGATGGGTGAAGGTAAAGCAGCCTGCAATACTGCAAGCCCAGCAGTTCAATCAGCATATAATGCAATGATGAAGATTATCATTGTTGGTTGGGCTATTTATCCA RYIDWLLTVPLLIVEFYLILAAATNVAGSLFKKLLAGSIVMLVAGYLGEAGVWPAMPAFLLGMAAWIYMIYELWMGEGKAACNTASPAVQSAYNAMMKIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTAACAGTACCTTTATTAATAGTAGAATTCTACTTAATTCTTGCAGCT---------GCT---ACTAACGTTGCTGGT---TCTTTA------------------------------------TTTAAGAAA---CTGCTTGCTGGTTCAATAGTAATGCTTGTTGCAGGATATTTAGGTGAA---------GCA------------------GGT------GTA---------------------------------TGG------------------------------------------------------------------CCAGCT------------------ATGCCAGCA---TTCTTACTTGGAATGGCGGCTTGGATTTATATGATTTATGAACTT---------------TGG------ATG---GGTGAA---GGTAAAGCAGCCTGCAAT------ACT---GCAAGCCCAGCAGTT---CAA---TCA---GCA---TAT---AAT---GCAATG---ATGAAGATTATCATTGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLIVEFYLILAA---A-TNVAG-SL------------FKK-LLAGSIVMLVAGYLGE---A------G--V-----------W----------------------PA------MPA-FLLGMAAWIYMIYEL-----W--M-GE-GKAACN--T-ASPAV-Q-S-A-Y-N-AM-MKIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5]_DQ422382 [IV-Gamma5] clone_med-50m-c3_DQ422382 gi|90024284|gb|DQ422382| Uncultured bacterium clone med-50m-c3 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-c3 putative proteorhodopsin gene, partial cds. DQ422382 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTACTAACAGTACCTTTATTAATAGTAGAATTCTACTTAATTCTTGCAGCTGCTACTAACGTTGCTGGTTCTTTATTTAAGAAACTGCTTGCTGGTTCAATAGTAATGCTTGTTGCAGGATATTTAGGTGAAGCAGGTGTATGGCCAGCTATGCCAGCATTCTTACTTGGAATGGCGGCTTGGATTTATATGATTTATGAACTTTGGATGGGTGAAGGTAAAGCAGCCTGCAATACTGCAAGCCCAGCAGTTCAATCAGCATATAATGCAATGATGAAGATTATCATTGTTGGTTGGGCTATTTATCCA RYIDWLLTVPLLIVEFYLILAAATNVAGSLFKKLLAGSIVMLVAGYLGEAGVWPAMPAFLLGMAAWIYMIYELWMGEGKAACNTASPAVQSAYNAMMKIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTAACAGTACCTTTATTAATAGTAGAATTCTACTTAATTCTTGCAGCT---------GCT---ACTAACGTTGCTGGT---TCTTTA------------------------------------TTTAAGAAA---CTGCTTGCTGGTTCAATAGTAATGCTTGTTGCAGGATATTTAGGTGAA---------GCA------------------GGT------GTA---------------------------------TGG------------------------------------------------------------------CCAGCT------------------ATGCCAGCA---TTCTTACTTGGAATGGCGGCTTGGATTTATATGATTTATGAACTT---------------TGG------ATG---GGTGAA---GGTAAAGCAGCCTGCAAT------ACT---GCAAGCCCAGCAGTT---CAA---TCA---GCA---TAT---AAT---GCAATG---ATGAAGATTATCATTGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLIVEFYLILAA---A-TNVAG-SL------------FKK-LLAGSIVMLVAGYLGE---A------G--V-----------W----------------------PA------MPA-FLLGMAAWIYMIYEL-----W--M-GE-GKAACN--T-ASPAV-Q-S-A-Y-N-AM-MKIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5]_DQ422425 [IV-Gamma5] clone_med-50m-g10_DQ422425 gi|90024370|gb|DQ422425| Uncultured bacterium clone med-50m-g10 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-g10 putative proteorhodopsin gene, partial cds. DQ422425 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTACTAACAGTACCTTTATTAATAGTAGAATTCTACTTAATTCTTGCAGCTGCTACTAACGTTGCTGGTTCTTTATTTAAGAAACTGCTTGCTGGTTCAATAGTAATGCTTGTTGCAGGATATTTAGGTGAAGCAGGTGTATGGCCAGCTATGCCAGCATTCTTACTTGGAATGGCGGCTTGGATTTATATGATTTATGAACTTTGGATGGGTGAAGGTAAAGCAGCCTGCAATACTGCAAGCCCAGCAGTTCAATCAGCATATAATGCAATGATGAAGATTATCATTGTTGGTTGGGCTATTTATCCA RYIDWLLTVPLLIVEFYLILAAATNVAGSLFKKLLAGSIVMLVAGYLGEAGVWPAMPAFLLGMAAWIYMIYELWMGEGKAACNTASPAVQSAYNAMMKIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTAACAGTACCTTTATTAATAGTAGAATTCTACTTAATTCTTGCAGCT---------GCT---ACTAACGTTGCTGGT---TCTTTA------------------------------------TTTAAGAAA---CTGCTTGCTGGTTCAATAGTAATGCTTGTTGCAGGATATTTAGGTGAA---------GCA------------------GGT------GTA---------------------------------TGG------------------------------------------------------------------CCAGCT------------------ATGCCAGCA---TTCTTACTTGGAATGGCGGCTTGGATTTATATGATTTATGAACTT---------------TGG------ATG---GGTGAA---GGTAAAGCAGCCTGCAAT------ACT---GCAAGCCCAGCAGTT---CAA---TCA---GCA---TAT---AAT---GCAATG---ATGAAGATTATCATTGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLIVEFYLILAA---A-TNVAG-SL------------FKK-LLAGSIVMLVAGYLGE---A------G--V-----------W----------------------PA------MPA-FLLGMAAWIYMIYEL-----W--M-GE-GKAACN--T-ASPAV-Q-S-A-Y-N-AM-MKIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5]_DQ422190 [IV-Gamma5] clone_med-0m-d3_DQ422190 gi|90023900|gb|DQ422190| Uncultured bacterium clone med-0m-d3 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-d3 putative proteorhodopsin gene, partial cds. DQ422190 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTACTAACAGTACCTTTATTAATAGTAGAATTCTACTTAATCCTTGCAGCTGCTACTAACGTTGCTGGTTCTTTATTTAAGAAACTGCTTGTTGGTTCAATAGTAATGCTTGTTGCAGGATATTTAGGTGAAGCAGGTGTATGGCCAGCTATGCCAGCATTCTTACTTGGAATGGCGGCTTGGATTTATATGATTTATGAACTTTGGATGGGTGAAGGTAAAGCAGCCTGCAATACTGCAAGCCCAGCAGTTCAATCAGCATATAATGCAATGATGAAGATTATCATTGTTGGTTGGGCTATTTATCCA RYIDWLLTVPLLIVEFYLILAAATNVAGSLFKKLLVGSIVMLVAGYLGEAGVWPAMPAFLLGMAAWIYMIYELWMGEGKAACNTASPAVQSAYNAMMKIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTAACAGTACCTTTATTAATAGTAGAATTCTACTTAATCCTTGCAGCT---------GCT---ACTAACGTTGCTGGT---TCTTTA------------------------------------TTTAAGAAA---CTGCTTGTTGGTTCAATAGTAATGCTTGTTGCAGGATATTTAGGTGAA---------GCA------------------GGT------GTA---------------------------------TGG------------------------------------------------------------------CCAGCT------------------ATGCCAGCA---TTCTTACTTGGAATGGCGGCTTGGATTTATATGATTTATGAACTT---------------TGG------ATG---GGTGAA---GGTAAAGCAGCCTGCAAT------ACT---GCAAGCCCAGCAGTT---CAA---TCA---GCA---TAT---AAT---GCAATG---ATGAAGATTATCATTGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLIVEFYLILAA---A-TNVAG-SL------------FKK-LLVGSIVMLVAGYLGE---A------G--V-----------W----------------------PA------MPA-FLLGMAAWIYMIYEL-----W--M-GE-GKAACN--T-ASPAV-Q-S-A-Y-N-AM-MKIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5]_DQ339394 [IV-Gamma5] clone_S-S4OM-F8_DQ339394 gi|85681759|gb|DQ339394| Uncultured bacterium clone S-S4OM-F8 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-F8 predicted proteorhodopsin gene, partial cds. DQ339394 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTACTAACAGTACCTCTATTAATAGTTGAATTCTACTTAATTCTTGCAGCTGCTACCAATGTTGCTGGTTCTTTATTTAAGAAACTGCTTCTTGGTTCAATAGTAATGCTTGTTGCAGGGTATTTAGGTGAAGCAGGCGTATGGCCAGCTATGCCAGCATTCTTACTTGGAATGGCGGCTTGGATTTATATGATTTATGAACTTCGGATGGGTGAAGGTAAAGCAGCCTGCAATACTGCAAGCCCAGCAGTTCAATCAGCATATAATGCAATGATGAAGATTATCATTGTTGGTTGGGCCATTTACCCA RYIDWLLTVPLLIVEFYLILAAATNVAGSLFKKLLLGSIVMLVAGYLGEAGVWPAMPAFLLGMAAWIYMIYELRMGEGKAACNTASPAVQSAYNAMMKIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTAACAGTACCTCTATTAATAGTTGAATTCTACTTAATTCTTGCAGCT---------GCT---ACCAATGTTGCTGGT---TCTTTA------------------------------------TTTAAGAAA---CTGCTTCTTGGTTCAATAGTAATGCTTGTTGCAGGGTATTTAGGTGAA---------GCA------------------GGC------GTA---------------------------------TGG------------------------------------------------------------------CCAGCT------------------ATGCCAGCA---TTCTTACTTGGAATGGCGGCTTGGATTTATATGATTTATGAACTT---------------CGG------ATG---GGTGAA---GGTAAAGCAGCCTGCAAT------ACT---GCAAGCCCAGCAGTT---CAA---TCA---GCA---TAT---AAT---GCAATG---ATGAAGATTATCATTGTT---------------------------------------------------------------GGTTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLIVEFYLILAA---A-TNVAG-SL------------FKK-LLLGSIVMLVAGYLGE---A------G--V-----------W----------------------PA------MPA-FLLGMAAWIYMIYEL-----R--M-GE-GKAACN--T-ASPAV-Q-S-A-Y-N-AM-MKIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5]_DQ203461 [IV-Gamma5] medHO10D6_env_samples_DQ203461 gi|77547370|gb|DQ203461| Uncultured bacterium clone medHO10D6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10D6 predicted proteorhodopsin gene, partial cds DQ203461 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTACATAGATTGGCTACTAACAGTGCCTTTATTAATAGTTGAGTTCTACTTAATTCTTGCAGCTGCTACCAATGTTGCTGGTTCTCTATTTAAGAAACTACTTATTGGTTCAATAGTTATGCTTGTTGCAGGATATTTAGGTGAAGCAGGTGTATGGCCAGCTATGCCAGCATTCTTACTTGGAATGGCGGCTTGGATTTACATGATCTATGAGCTTTGGGCCGGTGAAGGTAAATCAGCTTGCAATACTGCAAGCCCAGCTGTTCAATCAGCATACAATACTATGATGTATATAATTATATTTGGTTGGGCCATTTATCCA RYIDWLLTVPLLIVEFYLILAAATNVAGSLFKKLLIGSIVMLVAGYLGEAGVWPAMPAFLLGMAAWIYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATAGATTGG------------------------CTACTAACAGTGCCTTTATTAATAGTTGAGTTCTACTTAATTCTTGCAGCT---------GCT---ACCAATGTTGCTGGT---TCTCTA------------------------------------TTTAAGAAA---CTACTTATTGGTTCAATAGTTATGCTTGTTGCAGGATATTTAGGTGAA---------GCA------------------GGT------GTA---------------------------------TGG------------------------------------------------------------------CCAGCT------------------ATGCCAGCA---TTCTTACTTGGAATGGCGGCTTGGATTTACATGATCTATGAGCTT---------------TGG------GCC---GGTGAA---GGTAAATCAGCTTGCAAT------ACT---GCAAGCCCAGCTGTT---CAA---TCA---GCA---TAC---AAT---ACTATG---ATGTATATAATTATATTT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLIVEFYLILAA---A-TNVAG-SL------------FKK-LLIGSIVMLVAGYLGE---A------G--V-----------W----------------------PA------MPA-FLLGMAAWIYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5]_EU916125 [IV-Gamma5] clone_UDXM-36_EU916125 gi|229359124|gb|EU916125| Uncultured bacterium clone UDXM-36 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone UDXM-36 putative proteorhodopsin gene, partial cds. EU916125 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCTTCTACTGTATTCTTTTTTATTGAAAGAGATAGAGTTTCAGCTAAATGGAAGACTTCATTAACAGTATCCGGTCTTGTTACTGGTATTGCTTTTTGGCATTACTTGTACATGAGAGGAGTCTGGGTAGGTGAAACACCAACTGTATTCAGATATATTGACTGGTTACTTACAGTACCATTATTAATAGTTGAGTTTTACTTAATTCTTGCAGCTGCTAATGTTGCTGGTTCTTTATTTAAGAAACTGCTAGTTGGTTCTATAGTTATGTTGGTTGCAGGATACCTAGGTGAAGCTGGAGTTTGGCCAGCAATGCCAGCATTCTTACTTGGAATGGCGGCTTGGATTTATATGATCTATGAACTTTGGATGGGTGAAGGTAAATCAGCCTGCAATACTGCAGGTCCTGCGGTTCAATCAGCTTATAACACAATGATGTGGATTATTGTCTTCGGATGGGCA LASTVFFFIERDRVSAKWKTSLTVSGLVTGIAFWHYLYMRGVWVGETPTVFRYIDWLLTVPLLIVEFYLILAAANVAGSLFKKLLVGSIVMLVAGYLGEAGVWPAMPAFLLGMAAWIYMIYELWMGEGKSACNTAGPAVQSAYNTMMWIIVFGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCTTCTACTGTATTCTTTTTTATTGAAAGAGATAGAGTTTCAGCT---AAATGGAAGACTTCATTAACAGTATCCGGTCTTGTTACTGGTATTGCTTTTTGGCATTACTTGTACATGAGAGGAGTCTGGGTA---------------------------------------------------------GGTGAAACACCAACTGTATTCAGATATATTGACTGG------------------------TTACTTACAGTACCATTATTAATAGTTGAGTTTTACTTAATTCTTGCAGCT---------GCT------AATGTTGCTGGT---TCTTTA------------------------------------TTTAAGAAA---CTGCTAGTTGGTTCTATAGTTATGTTGGTTGCAGGATACCTAGGTGAA---------GCT------------------GGA------GTT---------------------------------TGG------------------------------------------------------------------CCAGCA------------------ATGCCAGCA---TTCTTACTTGGAATGGCGGCTTGGATTTATATGATCTATGAACTT---------------TGG------ATG---GGTGAA---GGTAAATCAGCCTGCAAT------ACT---GCAGGTCCTGCGGTT---CAA---TCA---GCT---TAT---AAC---ACAATG---ATGTGGATTATTGTCTTC---------------------------------------------------------------GGATGG---------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFIERDRVSA-KWKTSLTVSGLVTGIAFWHYLYMRGVWV-------------------GETPTVFRYIDW--------LLTVPLLIVEFYLILAA---A--NVAG-SL------------FKK-LLVGSIVMLVAGYLGE---A------G--V-----------W----------------------PA------MPA-FLLGMAAWIYMIYEL-----W--M-GE-GKSACN--T-AGPAV-Q-S-A-Y-N-TM-MWIIVF---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5]_EU916126 [IV-Gamma5] clone_UDXM-40_EU916126 gi|229359126|gb|EU916126| Uncultured bacterium clone UDXM-40 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone UDXM-40 putative proteorhodopsin gene, partial cds. EU916126 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCTTCTACTGTATTCTTTTTTATTGAAAGAGATAGAGTTTCAGCTAAATGGAAGACTTCATTAACAGTATCCGGTCTTGTTACTGGTATTGCTTTTTGGCATTACTTGTACATGAGAGGAGTCTGGGTAGGTGAAACACCAACTGTATTCAGATATATTGACTGGTTACTTACAGTACCATTATTAATAGTTGAGTTTTACTTAATTCTTGCAGCTGCTAATGTTGCTGGTTCTTTATTTAAGAAACTGCTAGTTGGTTCTATAGTTATGTTGGTTGCAGGATACCTAGGTGAAGCTGGAGTTTGGCCAGCAATGCCAGCATTCTTACTTGGAATGGCGGCTTGGATTTATATGATCTATGAACTTTGGATGGGTGAAGGTAAATCAGCCTGCAATACTGCAGGTCCTGCGGTTCAATCAGCTTATAACACAATGATGTGGATTATTGTCTTCGGATGGGCA LASTVFFFIERDRVSAKWKTSLTVSGLVTGIAFWHYLYMRGVWVGETPTVFRYIDWLLTVPLLIVEFYLILAAANVAGSLFKKLLVGSIVMLVAGYLGEAGVWPAMPAFLLGMAAWIYMIYELWMGEGKSACNTAGPAVQSAYNTMMWIIVFGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCTTCTACTGTATTCTTTTTTATTGAAAGAGATAGAGTTTCAGCT---AAATGGAAGACTTCATTAACAGTATCCGGTCTTGTTACTGGTATTGCTTTTTGGCATTACTTGTACATGAGAGGAGTCTGGGTA---------------------------------------------------------GGTGAAACACCAACTGTATTCAGATATATTGACTGG------------------------TTACTTACAGTACCATTATTAATAGTTGAGTTTTACTTAATTCTTGCAGCT---------GCT------AATGTTGCTGGT---TCTTTA------------------------------------TTTAAGAAA---CTGCTAGTTGGTTCTATAGTTATGTTGGTTGCAGGATACCTAGGTGAA---------GCT------------------GGA------GTT---------------------------------TGG------------------------------------------------------------------CCAGCA------------------ATGCCAGCA---TTCTTACTTGGAATGGCGGCTTGGATTTATATGATCTATGAACTT---------------TGG------ATG---GGTGAA---GGTAAATCAGCCTGCAAT------ACT---GCAGGTCCTGCGGTT---CAA---TCA---GCT---TAT---AAC---ACAATG---ATGTGGATTATTGTCTTC---------------------------------------------------------------GGATGG---------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFIERDRVSA-KWKTSLTVSGLVTGIAFWHYLYMRGVWV-------------------GETPTVFRYIDW--------LLTVPLLIVEFYLILAA---A--NVAG-SL------------FKK-LLVGSIVMLVAGYLGE---A------G--V-----------W----------------------PA------MPA-FLLGMAAWIYMIYEL-----W--M-GE-GKSACN--T-AGPAV-Q-S-A-Y-N-TM-MWIIVF---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5]_EU916123 [IV-Gamma5] clone_UDXM-25_EU916123 gi|229359121|gb|EU916123| Uncultured bacterium clone UDXM-25 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone UDXM-25 putative proteorhodopsin gene, partial cds. EU916123 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCTTCTACTGTATTCTTTTTTATTGAAAGAGATAGAGTTTCAGCTAAATGGAAGACTTCATTAACAGTATCCGGTCTTGTTACTGGTATTGCTTTTTGGCATTACTTGTACATGAGAGGAGTCTGGGTAGGTGAAACACCAACTGTATTCAGATATATTGACTGGTTACTTACAGTACCATTATTAATAGTTGAGTTTTACTTAATTCTTGCAGCTGCTAATGTTGCTGGTTCTTTATTTAAGAAACTGCTAGTTGGTTCTATAGTTATGTTGGTTGCAGGATACCTAGGTGAAGCTGGAGTTTGGCCAGCAATGCCAGCATTCTTACTTGGAATGGCGGCTTGGATTTATATGATCTATGAACTTTGGATGGGTGAAGGTAAATCAGCCTGCAATACTGCAAGTCCAGCTGTTCAATCAGCTTATAACACAATGATGTGGATTATCGTCTTTGGATGGGCT LASTVFFFIERDRVSAKWKTSLTVSGLVTGIAFWHYLYMRGVWVGETPTVFRYIDWLLTVPLLIVEFYLILAAANVAGSLFKKLLVGSIVMLVAGYLGEAGVWPAMPAFLLGMAAWIYMIYELWMGEGKSACNTASPAVQSAYNTMMWIIVFGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCTTCTACTGTATTCTTTTTTATTGAAAGAGATAGAGTTTCAGCT---AAATGGAAGACTTCATTAACAGTATCCGGTCTTGTTACTGGTATTGCTTTTTGGCATTACTTGTACATGAGAGGAGTCTGGGTA---------------------------------------------------------GGTGAAACACCAACTGTATTCAGATATATTGACTGG------------------------TTACTTACAGTACCATTATTAATAGTTGAGTTTTACTTAATTCTTGCAGCT---------GCT------AATGTTGCTGGT---TCTTTA------------------------------------TTTAAGAAA---CTGCTAGTTGGTTCTATAGTTATGTTGGTTGCAGGATACCTAGGTGAA---------GCT------------------GGA------GTT---------------------------------TGG------------------------------------------------------------------CCAGCA------------------ATGCCAGCA---TTCTTACTTGGAATGGCGGCTTGGATTTATATGATCTATGAACTT---------------TGG------ATG---GGTGAA---GGTAAATCAGCCTGCAAT------ACT---GCAAGTCCAGCTGTT---CAA---TCA---GCT---TAT---AAC---ACAATG---ATGTGGATTATCGTCTTT---------------------------------------------------------------GGATGG---------GCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFIERDRVSA-KWKTSLTVSGLVTGIAFWHYLYMRGVWV-------------------GETPTVFRYIDW--------LLTVPLLIVEFYLILAA---A--NVAG-SL------------FKK-LLVGSIVMLVAGYLGE---A------G--V-----------W----------------------PA------MPA-FLLGMAAWIYMIYEL-----W--M-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MWIIVF---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5]_EU916128 [IV-Gamma5] clone_UDXM-44_EU916128 gi|229359130|gb|EU916128| Uncultured bacterium clone UDXM-44 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone UDXM-44 putative proteorhodopsin gene, partial cds. EU916128 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTAGCTTCTACTGTATTCTTTTTTATTGAAAGAGATAGAGTTTCAGCTAAATGGAAGACTTCATTAACAGTATCCGGTCTTGTTACTGGTATTGCTTTTTGGCATTACTTGTACATGAGAGGAGTCTGGGTAGGTGAAACACCAACTGTATTCAGATATATTGACTGGTTACTTACAGTACCATTATTAATAGTTGAGTTTTACTTAATTCTTGCAGCTGCTAATGTTGCTGGTTCTTTATTTAAGAAACTGCTAGTTGGTTCTATAGTTATGTTGGTTGCAGGATACCTAGGTGAAGCTGGAGTTTGGCCAGCAATGCCAGCATTCTTACTTGGAATGGCGGCTTGGATTTATATGATCTATGAACTTTGGATGGGTGAAGGTAAATCAGCCTGCAATACTGCAAGTCCAGCTGTTCAATCAGCTTATAACACAATGATGTGGATTATTATCGTAGGATGGGCA LASTVFFFIERDRVSAKWKTSLTVSGLVTGIAFWHYLYMRGVWVGETPTVFRYIDWLLTVPLLIVEFYLILAAANVAGSLFKKLLVGSIVMLVAGYLGEAGVWPAMPAFLLGMAAWIYMIYELWMGEGKSACNTASPAVQSAYNTMMWIIIVGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCTTCTACTGTATTCTTTTTTATTGAAAGAGATAGAGTTTCAGCT---AAATGGAAGACTTCATTAACAGTATCCGGTCTTGTTACTGGTATTGCTTTTTGGCATTACTTGTACATGAGAGGAGTCTGGGTA---------------------------------------------------------GGTGAAACACCAACTGTATTCAGATATATTGACTGG------------------------TTACTTACAGTACCATTATTAATAGTTGAGTTTTACTTAATTCTTGCAGCT---------GCT------AATGTTGCTGGT---TCTTTA------------------------------------TTTAAGAAA---CTGCTAGTTGGTTCTATAGTTATGTTGGTTGCAGGATACCTAGGTGAA---------GCT------------------GGA------GTT---------------------------------TGG------------------------------------------------------------------CCAGCA------------------ATGCCAGCA---TTCTTACTTGGAATGGCGGCTTGGATTTATATGATCTATGAACTT---------------TGG------ATG---GGTGAA---GGTAAATCAGCCTGCAAT------ACT---GCAAGTCCAGCTGTT---CAA---TCA---GCT---TAT---AAC---ACAATG---ATGTGGATTATTATCGTA---------------------------------------------------------------GGATGG---------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LASTVFFFIERDRVSA-KWKTSLTVSGLVTGIAFWHYLYMRGVWV-------------------GETPTVFRYIDW--------LLTVPLLIVEFYLILAA---A--NVAG-SL------------FKK-LLVGSIVMLVAGYLGE---A------G--V-----------W----------------------PA------MPA-FLLGMAAWIYMIYEL-----W--M-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MWIIIV---------------------GW---A----------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86b]_AY598758 [IV-Gamma5-SAR86b] clone_MEDA15r9b9_AY598758 gi|47078712|gb|AY598758| Uncultured bacterium clone MEDA15r9b9 proteorhodopsin gene, partial cds. Uncultured bacterium clone MEDA15r9b9 proteorhodopsin gene, partial cds. AY598758 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 13-oct-04 #na Red Sea water Red Sea marine 27.17 34.22 Darwinian adaptation of proteorhodopsin to different light intensities in the marine environment Bielawski,J.P., Dunn,K.A., Sabehi,G. and Beja,O. Proc. Natl. Acad. Sci. U.S.A. 101 (41), 14824-14829 (2004) 15466697 #na ATGGGTAAAGGATTATTGATTTTAGGTGGTGTTATTGCGCTTCCTTCGTTTGCTGCAAGTGGTGGCGATCTTGATTCTAGTGATCTTACTGGAGTATCTTTTTGGCTTGTTACTGCTGCTCTCTTAGCTGCTACTGTTTTCTTTTTTGTTGAAAGAGATCAAGTAAGTGCTAAATGGAAAACATCACTTACAGTTTCTGGTCTAGTTACTGGTATTGCATTCTGGCATTATCTCTATATGAGAGGTGTGTGGATCGAAACTGGTGAAACGCCAACAGTATTTAGATATATTGATTGGTTGCTAACTGTTCCATTACTAATGGTTGAGTTCTACTTAATTCTTGCAGCTTGCACAAATGTTGCGGGCTCATTATTTAAGAAACTACTAGGTGGTTCGCTTGTAATGCTTATTGCAGGATATATGGGTGAGTCTGGAAGTCTTCCAGTATTGCCTGCATTCATTGTTGGGTGCCTAGCATGGTTCTACATGATTTATGAACTATATGCTGGTGAAGGTAAGGCTGCAGTTACTACTGCTAGTCCAGCTGTTATGTCTGCATACAATACTATGATGTTGATTATCGTAGTAGGTTGGGCAATTTACCCAGCTGGATATGCTGCTGGTTACTTAATGGGTGGAGATGGCGTATATGCTCAGAATTTAAACGTTATATATAACCTTGCTGACTTTGTTAACAAGATTTTATTTGGTTTAGTTATCTGGCATGTTGCTGTTAAAGAATCTTCAATCAC MGKGLLILGGVIALPSFAASGGDLDSSDLTGVSFWLVTAALLAATVFFFVERDQVSAKWKTSLTVSGLVTGIAFWHYLYMRGVWIETGETPTVFRYIDWLLTVPLLMVEFYLILAACTNVAGSLFKKLLGGSLVMLIAGYMGESGSLPVLPAFIVGCLAWFYMIYELYAGEGKAAVTTASPAVMSAYNTMMLIIVVGWAIYPAGYAAGYLMGGDGVYAQNLNVIYNLADFVNKILFGLVIWHVAVKESSI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAAGGATTATTGATTTTAGGTGGTGTTATTGCGCTTCCTTCGTTTGCTGCA------AGTGGTGGCGATCTTGATTCTAGTGATCTTACTGGAGTATCTTTTTGGCTTGTTACTGCTGCTCTCTTAGCTGCTACTGTTTTCTTTTTTGTTGAAAGAGATCAAGTAAGTGCT---AAATGGAAAACATCACTTACAGTTTCTGGTCTAGTTACTGGTATTGCATTCTGGCATTATCTCTATATGAGAGGTGTGTGGATC------------------------------GAA---------------------ACTGGTGAAACGCCAACAGTATTTAGATATATTGATTGG------------------------TTGCTAACTGTTCCATTACTAATGGTTGAGTTCTACTTAATTCTTGCAGCT---------TGC---ACAAATGTTGCGGGC---TCATTA------------------------------------TTTAAGAAA---CTACTAGGTGGTTCGCTTGTAATGCTTATTGCAGGATATATGGGTGAG---------TCT------------------GGA------AGT---------------------------------CTT------------------------------------------------------------------CCAGTA------------------TTGCCTGCA---TTCATTGTTGGGTGCCTAGCATGGTTCTACATGATTTATGAACTA---------------TAT------GCT---GGTGAA---GGTAAGGCTGCAGTTACT------ACT---GCTAGTCCAGCTGTT---ATG---TCT---GCA---TAC---AAT---ACTATG---ATGTTGATTATCGTAGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCAGCTGGATATGCTGCTGGTTACTTAATG---GGT------------------------------GGAGATGGCGTATATGCTCAGAATTTAAACGTTATATATAACCTTGCTGACTTTGTTAACAAGATTTTATTTGGTTTAGTTATCTGGCATGTTGCTGTTAAAGAA---TCTTCAATC------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------MGKGLLILGGVIALPSFAA--SGGDLDSSDLTGVSFWLVTAALLAATVFFFVERDQVSA-KWKTSLTVSGLVTGIAFWHYLYMRGVWI----------E-------TGETPTVFRYIDW--------LLTVPLLMVEFYLILAA---C-TNVAG-SL------------FKK-LLGGSLVMLIAGYMGE---S------G--S-----------L----------------------PV------LPA-FIVGCLAWFYMIYEL-----Y--A-GE-GKAAVT--T-ASPAV-M-S-A-Y-N-TM-MLIIVV---------------------GW---AIYPAGYAAGYLM-G----------GDGVYAQNLNVIYNLADFVNKILFGLVIWHVAVKE-SSI-------------------------------------- [IV-Gamma5-SAR86b]_AY250731 [IV-Gamma5-SAR86b] Uncultured_bacterium_clone_medA15_R8_3_partial_cds_AY250731 gi|29470259|gb|AY250731| Uncultured bacterium clone medA15 R8 3 proteorhodopsin gene, partial cds Uncultured bacterium clone medA15 R8 3 proteorhodopsin gene, partial cds AY250731 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 20-Apr-2004 #na collected_from_a_depth_of_5_m_at_a_station_in_the_Alboran_Sea_[30_N/4.25_W]_in_May_1998 Mediterranean Sea marine 36 -4.25 Novel Proteorhodopsin variants from the Mediterranean and Red Seas Sabehi,G., Massana,R., Bielawski,J.P., Rosenberg,M., Delong,E.F. and Beja,O. Environ. Microbiol. 5 (10), 842849 (2003) 14510837 PCR amplified from plankton DNA extracts ATGGGTAAATTATTAATGATCTTAGGTGGTGTCATTGCGCTTCCTTCGTTTGCTGCAAGTGGTGGCGATCTTGATTCTAGTGATCTTACTGGAGTATCTTTTTGGCTTGTTACTGCTGCTCTCTTAGCTGCTACTGTTTTCTTTTTTGTTGAAAGAGATCAAGTAAGTGCTAAATGGAAAACATCACTTACAGTTTCTGGTTTAGTTACTGGTATTGCATTCTGGCATTATCTCTATATGAGAGGTGTGTGGATCGAAACTGGTGAAACGCCAACAGTATTTAGATATATTGATTGGTTGCTAACTGTTCCGTTACTAATGGTTGAGTTCTACTTAATTCTTGCGGCTTGCACAAATGTTGCGGGCTCATTATTTAAGAAACTACTAGGTGGTTCGCTTGTAATGCTTATTGCAGGATATATGGGTGAGTCTGGAAGTCTTCCAGTATTGCCTGCATTCATTGTTGGATGCCTAGCATGGTTCTACATGATTTATGAACTATATGCTGGTGAAGGTAAGGCTGCAGTTACTACTGCTAGTCCTGCTGTTATGTCTGCATACAATACTATGATGTTGATTATCGTAGTAGGTTGGGCAATTTACCCGGCTGGATATGCTGCTGGATACCTAATGGGTGGTGATGGCGTATATGCTCAGAATTTAAACGTTATATATAATCTTGCTGACTTTGTTAACAAGATTTTATTTGGTTTAGTTATCTGGCATGTCGCTGTTAAAGAATCTTCTAATGCT MGKLLMILGGVIALPSFAASGGDLDSSDLTGVSFWLVTAALLAATVFFFVERDQVSAKWKTSLTVSGLVTGIAFWHYLYMRGVWIETGETPTVFRYIDWLLTVPLLMVEFYLILAACTNVAGSLFKKLLGGSLVMLIAGYMGESGSLPVLPAFIVGCLAWFYMIYELYAGEGKAAVTTASPAVMSAYNTMMLIIVVGWAIYPAGYAAGYLMGGDGVYAQNLNVIYNLADFVNKILFGLVIWHVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAATTATTAATGATCTTAGGTGGTGTCATTGCGCTTCCTTCGTTTGCTGCA------AGTGGTGGCGATCTTGATTCTAGTGATCTTACTGGAGTATCTTTTTGGCTTGTTACTGCTGCTCTCTTAGCTGCTACTGTTTTCTTTTTTGTTGAAAGAGATCAAGTAAGTGCT---AAATGGAAAACATCACTTACAGTTTCTGGTTTAGTTACTGGTATTGCATTCTGGCATTATCTCTATATGAGAGGTGTGTGGATC------------------------------GAA---------------------ACTGGTGAAACGCCAACAGTATTTAGATATATTGATTGG------------------------TTGCTAACTGTTCCGTTACTAATGGTTGAGTTCTACTTAATTCTTGCGGCT---------TGC---ACAAATGTTGCGGGC---TCATTA------------------------------------TTTAAGAAA---CTACTAGGTGGTTCGCTTGTAATGCTTATTGCAGGATATATGGGTGAG---------TCT------------------GGA------AGT---------------------------------CTT------------------------------------------------------------------CCAGTA------------------TTGCCTGCA---TTCATTGTTGGATGCCTAGCATGGTTCTACATGATTTATGAACTA---------------TAT------GCT---GGTGAA---GGTAAGGCTGCAGTTACT------ACT---GCTAGTCCTGCTGTT---ATG---TCT---GCA---TAC---AAT---ACTATG---ATGTTGATTATCGTAGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCGGCTGGATATGCTGCTGGATACCTAATG---GGT------------------------------GGTGATGGCGTATATGCTCAGAATTTAAACGTTATATATAATCTTGCTGACTTTGTTAACAAGATTTTATTTGGTTTAGTTATCTGGCATGTCGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MGKLLMILGGVIALPSFAA--SGGDLDSSDLTGVSFWLVTAALLAATVFFFVERDQVSA-KWKTSLTVSGLVTGIAFWHYLYMRGVWI----------E-------TGETPTVFRYIDW--------LLTVPLLMVEFYLILAA---C-TNVAG-SL------------FKK-LLGGSLVMLIAGYMGE---S------G--S-----------L----------------------PV------LPA-FIVGCLAWFYMIYEL-----Y--A-GE-GKAAVT--T-ASPAV-M-S-A-Y-N-TM-MLIIVV---------------------GW---AIYPAGYAAGYLM-G----------GDGVYAQNLNVIYNLADFVNKILFGLVIWHVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86b]_AY250732 [IV-Gamma5-SAR86b] Uncultured_bacterium_clone_medA15r10b5_partial_cds_AY250732 gi|29470261|gb|AY250732| Uncultured bacterium clone medA15r10b5 proteorhodopsin gene, partial cds Uncultured bacterium clone medA15r10b5 proteorhodopsin gene, partial cds AY250732 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 20-Apr-2004 #na collected_from_a_depth_of_5_m_at_a_station_in_the_Alboran_Sea_[30_N/4.25_W]_in_May_1998 Mediterranean Sea marine 36 -4.25 Novel Proteorhodopsin variants from the Mediterranean and Red Seas Sabehi,G., Massana,R., Bielawski,J.P., Rosenberg,M., Delong,E.F. and Beja,O. Environ. Microbiol. 5 (10), 842849 (2003) 14510837 PCR amplified from plankton DNA extracts ATGGGTAAACTATTAGTGATATTAGGTGGTGTCATTGCGCTTCCTCCGTTTGCTGCAAGTGGTGGCGATCTTGATTCTAGTGATCTTACTGGAGTATCTTTTTGGCTTGTTACTGCTGCTCTCTTAGCTGCTACTGTTTTCTTTTTTGTTGAAAGAGATCAAGTAAGTGCTAAATGGAAAACATCACTTACAGTTTCTGGTTTAGTTACTGGTATTGCATTCTGGCATTATCTCTATATGAGAGGTGTGTGGATCGAAACTGGTGAAACGCCAACAGTATTTAGATATATTGATTGGTTGCTAACTGTTCCGTTACTAATGGTTGAGTTCTACTTAATTCTTGCAGCTTGCACAAATGTTGCGGGCTCATTATTTAAGAAACTACTAGGTGGTTCGCTTGTAATGCTTATTGCAGGATATATGGGTGAGTCTGGAAGTCTTCCAGTATTGCCTGCATTCATTGTTGGATGCCTAGCATGGTTCTACATGATTTATGAACTATATGCTGGTGAAGGTAAGGCTGCAGTTACTACTGCTAGTCCTGCTGTTATGTCTGCATACAATACTATGATGTTGATTATCGTAGTAGGTTGGGCAATTTACCCGGCTGGATATGCTGCTGGATACCTAATGGGTGGTGATGGCGTATATGCTCAGAATTTAAACGTTATATATAATCTTGCTGACTTTGTTAACAAGATTTTATTTGGTTTAGTTATCTGGCATGTCGCTGTTAAAGAATCTTCTAATGCT MGKLLVILGGVIALPPFAASGGDLDSSDLTGVSFWLVTAALLAATVFFFVERDQVSAKWKTSLTVSGLVTGIAFWHYLYMRGVWIETGETPTVFRYIDWLLTVPLLMVEFYLILAACTNVAGSLFKKLLGGSLVMLIAGYMGESGSLPVLPAFIVGCLAWFYMIYELYAGEGKAAVTTASPAVMSAYNTMMLIIVVGWAIYPAGYAAGYLMGGDGVYAQNLNVIYNLADFVNKILFGLVIWHVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAACTATTAGTGATATTAGGTGGTGTCATTGCGCTTCCTCCGTTTGCTGCA------AGTGGTGGCGATCTTGATTCTAGTGATCTTACTGGAGTATCTTTTTGGCTTGTTACTGCTGCTCTCTTAGCTGCTACTGTTTTCTTTTTTGTTGAAAGAGATCAAGTAAGTGCT---AAATGGAAAACATCACTTACAGTTTCTGGTTTAGTTACTGGTATTGCATTCTGGCATTATCTCTATATGAGAGGTGTGTGGATC------------------------------GAA---------------------ACTGGTGAAACGCCAACAGTATTTAGATATATTGATTGG------------------------TTGCTAACTGTTCCGTTACTAATGGTTGAGTTCTACTTAATTCTTGCAGCT---------TGC---ACAAATGTTGCGGGC---TCATTA------------------------------------TTTAAGAAA---CTACTAGGTGGTTCGCTTGTAATGCTTATTGCAGGATATATGGGTGAG---------TCT------------------GGA------AGT---------------------------------CTT------------------------------------------------------------------CCAGTA------------------TTGCCTGCA---TTCATTGTTGGATGCCTAGCATGGTTCTACATGATTTATGAACTA---------------TAT------GCT---GGTGAA---GGTAAGGCTGCAGTTACT------ACT---GCTAGTCCTGCTGTT---ATG---TCT---GCA---TAC---AAT---ACTATG---ATGTTGATTATCGTAGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCGGCTGGATATGCTGCTGGATACCTAATG---GGT------------------------------GGTGATGGCGTATATGCTCAGAATTTAAACGTTATATATAATCTTGCTGACTTTGTTAACAAGATTTTATTTGGTTTAGTTATCTGGCATGTCGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MGKLLVILGGVIALPPFAA--SGGDLDSSDLTGVSFWLVTAALLAATVFFFVERDQVSA-KWKTSLTVSGLVTGIAFWHYLYMRGVWI----------E-------TGETPTVFRYIDW--------LLTVPLLMVEFYLILAA---C-TNVAG-SL------------FKK-LLGGSLVMLIAGYMGE---S------G--S-----------L----------------------PV------LPA-FIVGCLAWFYMIYEL-----Y--A-GE-GKAAVT--T-ASPAV-M-S-A-Y-N-TM-MLIIVV---------------------GW---AIYPAGYAAGYLM-G----------GDGVYAQNLNVIYNLADFVNKILFGLVIWHVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86b]_KJ926142 [IV-Gamma5-SAR86b] BOUM_OTU055_env_samples gb|KJ926142| Uncultured bacterium clone BOUM OTU055 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU055 putative proteorhodopsin gene, partial cds KJ926142 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 38.96217 14.32367 #na #na #na #na #na ATCGACTGGTTGCTAACTGTTCCGTTACTAATGGTTGAGTTCTATTTAATCCTTGCAGCTTGCACAAATGTTGCGGGTTCATTATTTAAGAAACTACTTGGTGGTTCGCTTGTAATGCTTATTGCAGGATATATGGGTGAGTCTGGAAGTCTTCCAGTATTGCCTGCATTCATTGTTGGGTGCTTAGCATGGTTCTACATGATTTATGAACTATATGCTGGTGAAGGTAAGGCTGCAGTTACTACTGCTAGTCCTGCTGTTACGTCTGCATACAATACTATGATGTTGATTATCGTAGTTGGCTGGGCAATATAC IDWLLTVPLLMVEFYLILAACTNVAGSLFKKLLGGSLVMLIAGYMGESGSLPVLPAFIVGCLAWFYMIYELYAGEGKAAVTTASPAVTSAYNTMMLIIVVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCGACTGG------------------------TTGCTAACTGTTCCGTTACTAATGGTTGAGTTCTATTTAATCCTTGCAGCT---------TGC---ACAAATGTTGCGGGT---TCATTA------------------------------------TTTAAGAAA---CTACTTGGTGGTTCGCTTGTAATGCTTATTGCAGGATATATGGGTGAG---------TCT------------------GGA------AGT---------------------------------CTT------------------------------------------------------------------CCAGTA------------------TTGCCTGCA---TTCATTGTTGGGTGCTTAGCATGGTTCTACATGATTTATGAACTA---------------TAT------GCT---GGTGAA---GGTAAGGCTGCAGTTACT------ACT---GCTAGTCCTGCTGTT---ACG---TCT---GCA---TAC---AAT---ACTATG---ATGTTGATTATCGTAGTT---------------------------------------------------------------GGCTGG---------GCAATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDW--------LLTVPLLMVEFYLILAA---C-TNVAG-SL------------FKK-LLGGSLVMLIAGYMGE---S------G--S-----------L----------------------PV------LPA-FIVGCLAWFYMIYEL-----Y--A-GE-GKAAVT--T-ASPAV-T-S-A-Y-N-TM-MLIIVV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86b]_AY250730 [IV-Gamma5-SAR86b] Uncultured_bacterium_clone_medA15r9b7_partial_cds_AY250730 gi|29470257|gb|AY250730| Uncultured bacterium clone medA15r9b7 proteorhodopsin gene, partial cds Uncultured bacterium clone medA15r9b7 proteorhodopsin gene, partial cds AY250730 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 20-Apr-2004 #na collected_from_a_depth_of_5_m_at_a_station_in_the_Alboran_Sea_[30_N/4.25_W]_in_May_1998 Mediterranean Sea marine 36 -4.25 Novel Proteorhodopsin variants from the Mediterranean and Red Seas Sabehi,G., Massana,R., Bielawski,J.P., Rosenberg,M., Delong,E.F. and Beja,O. Environ. Microbiol. 5 (10), 842849 (2003) 14510837 PCR amplified from plankton DNA extracts ATGGGTAAACAATTACTGATTTTAGGTGGTGTTATTGCACTTCCTTCGTTTGCTGCAAGTGGGGGCGATCTTGATTCTAGTGATCTTACTGGAGTTTCTTTTTGGCTTGTTACTGCTGCTCTCTTAGCTGCTACTGTTTTCTTTTTTGTTGAAAGAGATCAAGTAAGTGCTAAATGGAAAACATCACTTACAGTTTCTGGTTTAGTTACTGGTATTGCATTCTGGCATTATCTTTATATGAGAGGTGTGTGGATCGAAACTGGTGAAACGCCAACAGTATTTAGATATATTGATTGGTTGCTAACTGTTCCTTTGCTAATGGTTGAGTTCTACTTAATCCTTGCAGCGTGCACAAATGTTGCGGGTTCATTATTTAAGAAACTACTTGGTGGTTCGCTTGTAATGCTTATTGCAGGATATATGGGTGAGTCTGGAAGTCTTCCAGTATTGCCTGCATTCATTGTTGGGTGCTTAGCATGGTTCTACATGATTTATGAACTATATGCTGGTGAAGGTAAGGCTGCAGTTACTACTGCTAGTCCTGCTGTTATGTCTGCATACAATACTATGATGTTGATTATCGTAGTAGGTTGGGCAATTTACCCAGCTGGATATGCTGCTGGTTACCTAATGGGTGGTGATGGCGTATATGCTCAGAATTTAAACGTTATATATAACCTTGCTGACTTTGTTAACAAGATTTTATTTGGTTTAGTTATCTGGCATGTTGCTGTTAAAGAATCTTCTAATGCT MGKQLLILGGVIALPSFAASGGDLDSSDLTGVSFWLVTAALLAATVFFFVERDQVSAKWKTSLTVSGLVTGIAFWHYLYMRGVWIETGETPTVFRYIDWLLTVPLLMVEFYLILAACTNVAGSLFKKLLGGSLVMLIAGYMGESGSLPVLPAFIVGCLAWFYMIYELYAGEGKAAVTTASPAVMSAYNTMMLIIVVGWAIYPAGYAAGYLMGGDGVYAQNLNVIYNLADFVNKILFGLVIWHVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAACAATTACTGATTTTAGGTGGTGTTATTGCACTTCCTTCGTTTGCTGCA------AGTGGGGGCGATCTTGATTCTAGTGATCTTACTGGAGTTTCTTTTTGGCTTGTTACTGCTGCTCTCTTAGCTGCTACTGTTTTCTTTTTTGTTGAAAGAGATCAAGTAAGTGCT---AAATGGAAAACATCACTTACAGTTTCTGGTTTAGTTACTGGTATTGCATTCTGGCATTATCTTTATATGAGAGGTGTGTGGATC------------------------------GAA---------------------ACTGGTGAAACGCCAACAGTATTTAGATATATTGATTGG------------------------TTGCTAACTGTTCCTTTGCTAATGGTTGAGTTCTACTTAATCCTTGCAGCG---------TGC---ACAAATGTTGCGGGT---TCATTA------------------------------------TTTAAGAAA---CTACTTGGTGGTTCGCTTGTAATGCTTATTGCAGGATATATGGGTGAG---------TCT------------------GGA------AGT---------------------------------CTT------------------------------------------------------------------CCAGTA------------------TTGCCTGCA---TTCATTGTTGGGTGCTTAGCATGGTTCTACATGATTTATGAACTA---------------TAT------GCT---GGTGAA---GGTAAGGCTGCAGTTACT------ACT---GCTAGTCCTGCTGTT---ATG---TCT---GCA---TAC---AAT---ACTATG---ATGTTGATTATCGTAGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCAGCTGGATATGCTGCTGGTTACCTAATG---GGT------------------------------GGTGATGGCGTATATGCTCAGAATTTAAACGTTATATATAACCTTGCTGACTTTGTTAACAAGATTTTATTTGGTTTAGTTATCTGGCATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MGKQLLILGGVIALPSFAA--SGGDLDSSDLTGVSFWLVTAALLAATVFFFVERDQVSA-KWKTSLTVSGLVTGIAFWHYLYMRGVWI----------E-------TGETPTVFRYIDW--------LLTVPLLMVEFYLILAA---C-TNVAG-SL------------FKK-LLGGSLVMLIAGYMGE---S------G--S-----------L----------------------PV------LPA-FIVGCLAWFYMIYEL-----Y--A-GE-GKAAVT--T-ASPAV-M-S-A-Y-N-TM-MLIIVV---------------------GW---AIYPAGYAAGYLM-G----------GDGVYAQNLNVIYNLADFVNKILFGLVIWHVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86b]_EF107100 [IV-Gamma5-SAR86b] EB0_50A10_genomic_EF107100 gi|119713168|gb|EF107100| Uncultured marine bacterium EB0 50A10 genomic sequence Uncultured marine bacterium EB0 50A10 genomic sequence EF107100 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:415440 genomic_DNA other 16-nov-07 #na coastal_ocean/Monterey_Bay/surface_seawater Pacific Ocean marine 36.8 -122 Proteorhodopsin photosystem gene clusters exhibit coevolutionary trends and shared ancestry among diverse marine microbial phyla McCarren,J. and DeLong,E.F. Environ. Microbiol. 9 (4), 846858 (2007) 17359257 metagenomic ATGAAATTTTTATTAATGTTAGGTGGTGTTATTGCGCTTCCTTCGTTTGCTGCAAGTGGTGGCGATCTTGATTCTAGTGATCTTACTGGAGTTTCTTTTTGGCTTGTTACTGCCGCTCTCTTAGCTGCTACTGTTTTCTTTTTTGTTGAAAGAGATCAAGTAAGTGCTAAATGGAAAACATCACTTACAGTTTCAGGTTTAGTTACTGGTATTGCATTCTGGCATTATCTCTATATGAGAGGTGTTTGGATCGAAACTGGTGAAACGCCAACAGTATTTAGATATATTGATTGGTTACTAACTGTTCCGTTACTAATGGTTGAGTTCTACTTAATCCTTGCAGCTTGCACAAATGTCGCAGGTTCATTATTTAAGAAGCTACTAGGTGGTTCGCTTGTAATGCTTATTGCAGGATATATGGGTGAGTCTGGAAGTCTTCCAGTATTGCCTGCATTCATTGTTGGGTGCCTAGCATGGTTCTACATGATTTATGAACTATATGCTGGTGAAGGTAAGGCTGCAGTTACTACTGCTAGTCCAGCTGTTATGTCTGCATACAATACTATGATGTTGATTATCGTAGTAGGTTGGGCAATTTACCCAGCTGGATATGCTGCTGGTTACCTAATGGGTGGTGATGGTGTATATGCTCAGAATTTAAACGTTATATATAACCTTGCTGACTTTGTTAACAAGATTTTATTTGGTTTAGTTATCTGGCATGTTGCTGTTAAAGAGTCTGCTCAT MKFLLMLGGVIALPSFAASGGDLDSSDLTGVSFWLVTAALLAATVFFFVERDQVSAKWKTSLTVSGLVTGIAFWHYLYMRGVWIETGETPTVFRYIDWLLTVPLLMVEFYLILAACTNVAGSLFKKLLGGSLVMLIAGYMGESGSLPVLPAFIVGCLAWFYMIYELYAGEGKAAVTTASPAVMSAYNTMMLIIVVGWAIYPAGYAAGYLMGGDGVYAQNLNVIYNLADFVNKILFGLVIWHVAVKESAH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAATTTTTATTAATGTTAGGTGGTGTTATTGCGCTTCCTTCGTTTGCTGCA------AGTGGTGGCGATCTTGATTCTAGTGATCTTACTGGAGTTTCTTTTTGGCTTGTTACTGCCGCTCTCTTAGCTGCTACTGTTTTCTTTTTTGTTGAAAGAGATCAAGTAAGTGCT---AAATGGAAAACATCACTTACAGTTTCAGGTTTAGTTACTGGTATTGCATTCTGGCATTATCTCTATATGAGAGGTGTTTGGATC------------------------------GAA---------------------ACTGGTGAAACGCCAACAGTATTTAGATATATTGATTGG------------------------TTACTAACTGTTCCGTTACTAATGGTTGAGTTCTACTTAATCCTTGCAGCT---------TGC---ACAAATGTCGCAGGT---TCATTA------------------------------------TTTAAGAAG---CTACTAGGTGGTTCGCTTGTAATGCTTATTGCAGGATATATGGGTGAG---------TCT------------------GGA------AGT---------------------------------CTT------------------------------------------------------------------CCAGTA------------------TTGCCTGCA---TTCATTGTTGGGTGCCTAGCATGGTTCTACATGATTTATGAACTA---------------TAT------GCT---GGTGAA---GGTAAGGCTGCAGTTACT------ACT---GCTAGTCCAGCTGTT---ATG---TCT---GCA---TAC---AAT---ACTATG---ATGTTGATTATCGTAGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCAGCTGGATATGCTGCTGGTTACCTAATG---GGT------------------------------GGTGATGGTGTATATGCTCAGAATTTAAACGTTATATATAACCTTGCTGACTTTGTTAACAAGATTTTATTTGGTTTAGTTATCTGGCATGTTGCTGTTAAAGAG---TCTGCTCAT------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------MKFLLMLGGVIALPSFAA--SGGDLDSSDLTGVSFWLVTAALLAATVFFFVERDQVSA-KWKTSLTVSGLVTGIAFWHYLYMRGVWI----------E-------TGETPTVFRYIDW--------LLTVPLLMVEFYLILAA---C-TNVAG-SL------------FKK-LLGGSLVMLIAGYMGE---S------G--S-----------L----------------------PV------LPA-FIVGCLAWFYMIYEL-----Y--A-GE-GKAAVT--T-ASPAV-M-S-A-Y-N-TM-MLIIVV---------------------GW---AIYPAGYAAGYLM-G----------GDGVYAQNLNVIYNLADFVNKILFGLVIWHVAVKE-SAH-------------------------------------- [IV-Gamma5-SAR86b]_AY250736 [IV-Gamma5-SAR86b] Uncultured_bacterium_clone_medA15_R8ex9_partial_cds_AY250736 gi|29470269|gb|AY250736| Uncultured bacterium clone medA15 R8ex9 proteorhodopsin gene, partial cds Uncultured bacterium clone medA15 R8ex9 proteorhodopsin gene, partial cds AY250736 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 20-Apr-2004 #na collected_from_a_depth_of_5_m_at_a_station_in_the_Alboran_Sea_[30_N/4.25_W]_in_May_1998 Mediterranean Sea marine 36 -4.25 Novel Proteorhodopsin variants from the Mediterranean and Red Seas Sabehi,G., Massana,R., Bielawski,J.P., Rosenberg,M., Delong,E.F. and Beja,O. Environ. Microbiol. 5 (10), 842849 (2003) 14510837 PCR amplified from plankton DNA extracts ATGGGTAAATTATTACTGATCTTAGGCGGTGTTATTGCGCTTCCTTCGTTTGCTGCAAGTGGAGGCGATCTTGATTCTAGTGATCTTACTGGAGTATCTTTTTGGCTTGTTACTGCTGCTCTCTTAGCTGCTACTGTTTTCTTTTTTGTTGAAAGAGATCAAGTAAGCGCTAAATGGAAAACATCACTTACAGTTTCTGGTTTAGTTACTGGTATTGCATTCTGGCATTATCTCTATATGAGAGGTGTGTGGATCGAAACCGGTGAAACACCAACAGTATTTAGATATATTGATTGGTTGCTAACTGTTCCGTTACTAATGGTTGAGTTCTACTTAATCCTCGCAGCTTGCACTAATGTTGCAGGTTCATTATTTAAGAAACTACTAATTGGTTCGCTTGTAATGCTTATTGCAGGATATATGGGTGAGTCTGGAAGTCTTCCAGTATTGCCTGCATTCCTTGTTGGGTGCGCAGCATGGTTATACATGATTTATGAACTATATGCTGGTGAAGGTAAGGCTGCAGTTACTACTGCTAGTCCTGCTGTTATGTCTGCATACAATACTATGATGTTGATTATCGTAGTAGGTTGGGCAATATACCCAGCTGGATATGCTGCTGGTTACTTAATGGGTGGAGATGGCGTATATGCTCAGAATTTAAACGTTATATATAACCTTGCTGACTTCGTTAACAAGATTTTATTTGGTTTAGTTATCTGGCATGTTGCTGTTAAAGAATCTTCTAATGCT MGKLLLILGGVIALPSFAASGGDLDSSDLTGVSFWLVTAALLAATVFFFVERDQVSAKWKTSLTVSGLVTGIAFWHYLYMRGVWIETGETPTVFRYIDWLLTVPLLMVEFYLILAACTNVAGSLFKKLLIGSLVMLIAGYMGESGSLPVLPAFLVGCAAWLYMIYELYAGEGKAAVTTASPAVMSAYNTMMLIIVVGWAIYPAGYAAGYLMGGDGVYAQNLNVIYNLADFVNKILFGLVIWHVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAATTATTACTGATCTTAGGCGGTGTTATTGCGCTTCCTTCGTTTGCTGCA------AGTGGAGGCGATCTTGATTCTAGTGATCTTACTGGAGTATCTTTTTGGCTTGTTACTGCTGCTCTCTTAGCTGCTACTGTTTTCTTTTTTGTTGAAAGAGATCAAGTAAGCGCT---AAATGGAAAACATCACTTACAGTTTCTGGTTTAGTTACTGGTATTGCATTCTGGCATTATCTCTATATGAGAGGTGTGTGGATC------------------------------GAA---------------------ACCGGTGAAACACCAACAGTATTTAGATATATTGATTGG------------------------TTGCTAACTGTTCCGTTACTAATGGTTGAGTTCTACTTAATCCTCGCAGCT---------TGC---ACTAATGTTGCAGGT---TCATTA------------------------------------TTTAAGAAA---CTACTAATTGGTTCGCTTGTAATGCTTATTGCAGGATATATGGGTGAG---------TCT------------------GGA------AGT---------------------------------CTT------------------------------------------------------------------CCAGTA------------------TTGCCTGCA---TTCCTTGTTGGGTGCGCAGCATGGTTATACATGATTTATGAACTA---------------TAT------GCT---GGTGAA---GGTAAGGCTGCAGTTACT------ACT---GCTAGTCCTGCTGTT---ATG---TCT---GCA---TAC---AAT---ACTATG---ATGTTGATTATCGTAGTA---------------------------------------------------------------GGTTGG---------GCAATATACCCAGCTGGATATGCTGCTGGTTACTTAATG---GGT------------------------------GGAGATGGCGTATATGCTCAGAATTTAAACGTTATATATAACCTTGCTGACTTCGTTAACAAGATTTTATTTGGTTTAGTTATCTGGCATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MGKLLLILGGVIALPSFAA--SGGDLDSSDLTGVSFWLVTAALLAATVFFFVERDQVSA-KWKTSLTVSGLVTGIAFWHYLYMRGVWI----------E-------TGETPTVFRYIDW--------LLTVPLLMVEFYLILAA---C-TNVAG-SL------------FKK-LLIGSLVMLIAGYMGE---S------G--S-----------L----------------------PV------LPA-FLVGCAAWLYMIYEL-----Y--A-GE-GKAAVT--T-ASPAV-M-S-A-Y-N-TM-MLIIVV---------------------GW---AIYPAGYAAGYLM-G----------GDGVYAQNLNVIYNLADFVNKILFGLVIWHVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86b]_AY250735 [IV-Gamma5-SAR86b] Uncultured_bacterium_clone_medA19_R8_20_partial_cds_AY250735 gi|29470267|gb|AY250735| Uncultured bacterium clone medA19 R8 20 proteorhodopsin gene, partial cds Uncultured bacterium clone medA19 R8 20 proteorhodopsin gene, partial cds AY250735 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 20-Apr-2004 #na collected_from_a_depth_of_100_m_at_a_station_in_the_Alboran_Sea_[30_N/4.25_W]_in_May_1998 Mediterranean Sea marine 36 -4.25 Novel Proteorhodopsin variants from the Mediterranean and Red Seas Sabehi,G., Massana,R., Bielawski,J.P., Rosenberg,M., Delong,E.F. and Beja,O. Environ. Microbiol. 5 (10), 842849 (2003) 14510837 PCR amplified from plankton DNA extracts ATGGGTAAATTATTATTGATCTTAGGCGGTGTTATTGCGCTTCCTTCGTTTGCTGCAAGTGGAGGCGATCTTGATTCTAGTGATCTTACTGGAGTATCTTTTTGGCTTGTTACTGCTGCTCTCTTAGCTGCTACTGTTTTCTTTTTTGTTGAAAGAGATCAAGTAAGCGCTAAATGGAAAACATCACTTACAGTTTCTGGTTTAGTTACTGGTATTGCATTCTGGCATTATCTCTATATGAGAGGTGTGTGGATCGAAACCGGTGAAACACCAACAGTATTTAGGTATATTGATTGGTTGCTAACTGTTCCGTTACTAATGGTTGAGTTCTACTTAATCCTCGCAGCTTGCACTAATGTTGCAGGTTCATTATTTAAGAAACTACTAATTGGTTCGCTTGTAATGCTTATTGCAGGATATATGGGTGAGTCTGGAAGTCTTCCAGTATTGCCTGCATTCCTTGTTGGGTGCGCAGCATGGTTATACATGATTTATGAACTATATGCTGGTGAAGGTAAGGCTGCAGTTACTACTGCTAGTCCTGCTGTTATGTCTGCATACAATACTATGATGTTGATTATCGTAGTAGGTTGGGCAATATACCCAGCTGGATATGCTGCTGGTTACTTAATGGGTGGAGATGGCGTATATGCTCAGAATTTAAACGTTATATATAACCTTGCTGACTTTGTTAACAAGATTTTATTTGGTTTAGTTATCTGGCATGTTGCTGTTAAAGAATCTTCTAAT MGKLLLILGGVIALPSFAASGGDLDSSDLTGVSFWLVTAALLAATVFFFVERDQVSAKWKTSLTVSGLVTGIAFWHYLYMRGVWIETGETPTVFRYIDWLLTVPLLMVEFYLILAACTNVAGSLFKKLLIGSLVMLIAGYMGESGSLPVLPAFLVGCAAWLYMIYELYAGEGKAAVTTASPAVMSAYNTMMLIIVVGWAIYPAGYAAGYLMGGDGVYAQNLNVIYNLADFVNKILFGLVIWHVAVKESSN ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAATTATTATTGATCTTAGGCGGTGTTATTGCGCTTCCTTCGTTTGCTGCA------AGTGGAGGCGATCTTGATTCTAGTGATCTTACTGGAGTATCTTTTTGGCTTGTTACTGCTGCTCTCTTAGCTGCTACTGTTTTCTTTTTTGTTGAAAGAGATCAAGTAAGCGCT---AAATGGAAAACATCACTTACAGTTTCTGGTTTAGTTACTGGTATTGCATTCTGGCATTATCTCTATATGAGAGGTGTGTGGATC------------------------------GAA---------------------ACCGGTGAAACACCAACAGTATTTAGGTATATTGATTGG------------------------TTGCTAACTGTTCCGTTACTAATGGTTGAGTTCTACTTAATCCTCGCAGCT---------TGC---ACTAATGTTGCAGGT---TCATTA------------------------------------TTTAAGAAA---CTACTAATTGGTTCGCTTGTAATGCTTATTGCAGGATATATGGGTGAG---------TCT------------------GGA------AGT---------------------------------CTT------------------------------------------------------------------CCAGTA------------------TTGCCTGCA---TTCCTTGTTGGGTGCGCAGCATGGTTATACATGATTTATGAACTA---------------TAT------GCT---GGTGAA---GGTAAGGCTGCAGTTACT------ACT---GCTAGTCCTGCTGTT---ATG---TCT---GCA---TAC---AAT---ACTATG---ATGTTGATTATCGTAGTA---------------------------------------------------------------GGTTGG---------GCAATATACCCAGCTGGATATGCTGCTGGTTACTTAATG---GGT------------------------------GGAGATGGCGTATATGCTCAGAATTTAAACGTTATATATAACCTTGCTGACTTTGTTAACAAGATTTTATTTGGTTTAGTTATCTGGCATGTTGCTGTTAAAGAA---TCTTCTAAT------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------MGKLLLILGGVIALPSFAA--SGGDLDSSDLTGVSFWLVTAALLAATVFFFVERDQVSA-KWKTSLTVSGLVTGIAFWHYLYMRGVWI----------E-------TGETPTVFRYIDW--------LLTVPLLMVEFYLILAA---C-TNVAG-SL------------FKK-LLIGSLVMLIAGYMGE---S------G--S-----------L----------------------PV------LPA-FLVGCAAWLYMIYEL-----Y--A-GE-GKAAVT--T-ASPAV-M-S-A-Y-N-TM-MLIIVV---------------------GW---AIYPAGYAAGYLM-G----------GDGVYAQNLNVIYNLADFVNKILFGLVIWHVAVKE-SSN-------------------------------------- [IV-Gamma5-SAR86b]_AY250734 [IV-Gamma5-SAR86b] Uncultured_bacterium_clone_medA15_r8ex7_partial_cds_AY250734 gi|29470265|gb|AY250734| Uncultured bacterium clone medA15 r8ex7 proteorhodopsin gene, partial cds Uncultured bacterium clone medA15 r8ex7 proteorhodopsin gene, partial cds AY250734 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 20-Apr-2004 #na collected_from_a_depth_of_5_m_at_a_station_in_the_Alboran_Sea_[30_N/4.25_W]_in_May_1998 Mediterranean Sea marine 36 -4.25 Novel Proteorhodopsin variants from the Mediterranean and Red Seas Sabehi,G., Massana,R., Bielawski,J.P., Rosenberg,M., Delong,E.F. and Beja,O. Environ. Microbiol. 5 (10), 842849 (2003) 14510837 PCR amplified from plankton DNA extracts ATGGGTAAATTATTACTGATTTTAGGCGGTGTTATTGCGCTTCCTTCGTTTGCTGCAAGTGGAGGCGATCTTGATTCTAGTGATCTTACTGGAGTATCTTTTTGGCTTGTTACTGCTGCTCTCTTAGCTGCTACTGTTTTCTTTTTTGTTGAAAGAGATCAAGTAAGCGCTAAATGGAAAACATCACTTACAGTTTCTGGTTTAGTTACTGGTATTGCATTCTGGCATTATCTCTATATGAGAGGTGTGTGGATCGAAACCGGTGAAACACCAACAGTATTTAGATATATTGATTGGTTGCTAACTGTTCCGTTACTAATGGTTGAGTTCTACTTAATCCTCGCAGCTTGCACTAATGTTGCAGGTTCATTATTTAAGAAACTACTAATTGGTTCGCTTGTAATGCTTATTGCAGGATATATGGGTGAGTCTGGAAGTCTTCCAGTATTGCCTGCATTCCTTGTTGGGTGCGCAGCATGGTTATACATGATTTATGAACTATATGCTGGTGAAGGTAAGGCTGCAGTTACTACTGCTAGTCCTGCTGTTATGTCTGCATACAATACTATGATGTTGATTATCGTAGTAGGTTGGGCAATATACCCAGCTGGATATGCTGCTGGTTACTTAATGGGTGGAGATGGCGTATATGCTCAGAATTTAAACGTTATATATAACCTTGCTGACTTTGTTAACAAGATTTTATTTGGTTTAGTTATCTGGCATGTTGCTGTTAAAGAATCTTCTAATGCT MGKLLLILGGVIALPSFAASGGDLDSSDLTGVSFWLVTAALLAATVFFFVERDQVSAKWKTSLTVSGLVTGIAFWHYLYMRGVWIETGETPTVFRYIDWLLTVPLLMVEFYLILAACTNVAGSLFKKLLIGSLVMLIAGYMGESGSLPVLPAFLVGCAAWLYMIYELYAGEGKAAVTTASPAVMSAYNTMMLIIVVGWAIYPAGYAAGYLMGGDGVYAQNLNVIYNLADFVNKILFGLVIWHVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAATTATTACTGATTTTAGGCGGTGTTATTGCGCTTCCTTCGTTTGCTGCA------AGTGGAGGCGATCTTGATTCTAGTGATCTTACTGGAGTATCTTTTTGGCTTGTTACTGCTGCTCTCTTAGCTGCTACTGTTTTCTTTTTTGTTGAAAGAGATCAAGTAAGCGCT---AAATGGAAAACATCACTTACAGTTTCTGGTTTAGTTACTGGTATTGCATTCTGGCATTATCTCTATATGAGAGGTGTGTGGATC------------------------------GAA---------------------ACCGGTGAAACACCAACAGTATTTAGATATATTGATTGG------------------------TTGCTAACTGTTCCGTTACTAATGGTTGAGTTCTACTTAATCCTCGCAGCT---------TGC---ACTAATGTTGCAGGT---TCATTA------------------------------------TTTAAGAAA---CTACTAATTGGTTCGCTTGTAATGCTTATTGCAGGATATATGGGTGAG---------TCT------------------GGA------AGT---------------------------------CTT------------------------------------------------------------------CCAGTA------------------TTGCCTGCA---TTCCTTGTTGGGTGCGCAGCATGGTTATACATGATTTATGAACTA---------------TAT------GCT---GGTGAA---GGTAAGGCTGCAGTTACT------ACT---GCTAGTCCTGCTGTT---ATG---TCT---GCA---TAC---AAT---ACTATG---ATGTTGATTATCGTAGTA---------------------------------------------------------------GGTTGG---------GCAATATACCCAGCTGGATATGCTGCTGGTTACTTAATG---GGT------------------------------GGAGATGGCGTATATGCTCAGAATTTAAACGTTATATATAACCTTGCTGACTTTGTTAACAAGATTTTATTTGGTTTAGTTATCTGGCATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MGKLLLILGGVIALPSFAA--SGGDLDSSDLTGVSFWLVTAALLAATVFFFVERDQVSA-KWKTSLTVSGLVTGIAFWHYLYMRGVWI----------E-------TGETPTVFRYIDW--------LLTVPLLMVEFYLILAA---C-TNVAG-SL------------FKK-LLIGSLVMLIAGYMGE---S------G--S-----------L----------------------PV------LPA-FLVGCAAWLYMIYEL-----Y--A-GE-GKAAVT--T-ASPAV-M-S-A-Y-N-TM-MLIIVV---------------------GW---AIYPAGYAAGYLM-G----------GDGVYAQNLNVIYNLADFVNKILFGLVIWHVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86b]_AY598757 [IV-Gamma5-SAR86b] clone_A15_R9EX2_AY598757 gi|47078710|gb|AY598757| Uncultured bacterium clone A15 R9EX2 proteorhodopsin gene, partial cds. Uncultured bacterium clone A15 R9EX2 proteorhodopsin gene, partial cds. AY598757 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 13-oct-04 #na collected from a depth of 5 m at a station in the Alboran Sea (30 N, 4.25 W) in May 1998 Mediterranean Sea marine 36 -4.25 Darwinian adaptation of proteorhodopsin to different light intensities in the marine environment Bielawski,J.P., Dunn,K.A., Sabehi,G. and Beja,O. Proc. Natl. Acad. Sci. U.S.A. 101 (41), 14824-14829 (2004) 15466697 #na ATGGGTAAAATATTACTGATCTTAGGCGGTGTTATTGCGCTTCCTTCGTTTGCTGCAAGTGGAGGCGATCTTGATTCTAGTGATCTTACTGGAGTATCTTTTTGGCTTGTTACTGCTGCTCTCTTAGCTGCTACTGTTTTCTTTTTTGTTGAAAGAGATCAAGTAAGCGCTAAATGGAAAACATCACTTACAGTTTCTGGTTTAGTTACTGGTATTGCATTCTGGCATTATCTCTATATGAGAGGTGTGTGGATCGAAACCGGTGAAACACCAACAGTATTTAGATATATTGATTGGTTGCTAACTGTTCCGTTACTAATGGTTGAGTTCTACTTAATCCTCGCAGCTTGCACTAATGTTGCAGGTTTATTATTTAAGAAACTACTAATTGGTTCGCTTGTAATGCTTATTGCAGGATATATGGGTGAGTCTGGAAATCTTCCAGTATTGCCTGCATTCCTTGTTGGGTGCGCAGCATGGTTATACATGATTTATGAACTATATGCTGGTGAAGGTAAGGCTGCAGTTACTACTGCTAGTCCTGCTGTTATGTCTGCATACAATACTATGATGTTGATTATCGTATTAGGTTGGGCAATATACCCAGCTGGATATGCTGCTGGTTACTTAATGGGTGGAGATGGCATATATGCTCAGAATTTAAACGTTATATATAACCTTGCTGACTTTGTTAACAAGATTTTATTTGGTTTAGTTATCTGGCATGTTGCTGTTAAAGAATCTTCTAATGCTA MGKILLILGGVIALPSFAASGGDLDSSDLTGVSFWLVTAALLAATVFFFVERDQVSAKWKTSLTVSGLVTGIAFWHYLYMRGVWIETGETPTVFRYIDWLLTVPLLMVEFYLILAACTNVAGLLFKKLLIGSLVMLIAGYMGESGNLPVLPAFLVGCAAWLYMIYELYAGEGKAAVTTASPAVMSAYNTMMLIIVLGWAIYPAGYAAGYLMGGDGIYAQNLNVIYNLADFVNKILFGLVIWHVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAAATATTACTGATCTTAGGCGGTGTTATTGCGCTTCCTTCGTTTGCTGCA------AGTGGAGGCGATCTTGATTCTAGTGATCTTACTGGAGTATCTTTTTGGCTTGTTACTGCTGCTCTCTTAGCTGCTACTGTTTTCTTTTTTGTTGAAAGAGATCAAGTAAGCGCT---AAATGGAAAACATCACTTACAGTTTCTGGTTTAGTTACTGGTATTGCATTCTGGCATTATCTCTATATGAGAGGTGTGTGGATC------------------------------GAA---------------------ACCGGTGAAACACCAACAGTATTTAGATATATTGATTGG------------------------TTGCTAACTGTTCCGTTACTAATGGTTGAGTTCTACTTAATCCTCGCAGCT---------TGC---ACTAATGTTGCAGGT---TTATTA------------------------------------TTTAAGAAA---CTACTAATTGGTTCGCTTGTAATGCTTATTGCAGGATATATGGGTGAG---------TCT------------------GGA------AAT---------------------------------CTT------------------------------------------------------------------CCAGTA------------------TTGCCTGCA---TTCCTTGTTGGGTGCGCAGCATGGTTATACATGATTTATGAACTA---------------TAT------GCT---GGTGAA---GGTAAGGCTGCAGTTACT------ACT---GCTAGTCCTGCTGTT---ATG---TCT---GCA---TAC---AAT---ACTATG---ATGTTGATTATCGTATTA---------------------------------------------------------------GGTTGG---------GCAATATACCCAGCTGGATATGCTGCTGGTTACTTAATG---GGT------------------------------GGAGATGGCATATATGCTCAGAATTTAAACGTTATATATAACCTTGCTGACTTTGTTAACAAGATTTTATTTGGTTTAGTTATCTGGCATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MGKILLILGGVIALPSFAA--SGGDLDSSDLTGVSFWLVTAALLAATVFFFVERDQVSA-KWKTSLTVSGLVTGIAFWHYLYMRGVWI----------E-------TGETPTVFRYIDW--------LLTVPLLMVEFYLILAA---C-TNVAG-LL------------FKK-LLIGSLVMLIAGYMGE---S------G--N-----------L----------------------PV------LPA-FLVGCAAWLYMIYEL-----Y--A-GE-GKAAVT--T-ASPAV-M-S-A-Y-N-TM-MLIIVL---------------------GW---AIYPAGYAAGYLM-G----------GDGIYAQNLNVIYNLADFVNKILFGLVIWHVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86b]_AY250737 [IV-Gamma5-SAR86b] clone_medA15_r9_3_partial_AY250737 gi|29470271|gb|AY250737| Uncultured bacterium clone medA15 r9 3 proteorhodopsin gene, partial cds Uncultured bacterium clone medA15 r9 3 proteorhodopsin gene, partial cds AY250737 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 20-Apr-2004 #na collected_from_a_depth_of_5_m_at_a_station_in_the_Alboran_Sea_[30_N/4.25_W]_in_May_1998 Mediterranean Sea marine 36 -4.25 Novel Proteorhodopsin variants from the Mediterranean and Red Seas Sabehi,G., Massana,R., Bielawski,J.P., Rosenberg,M., Delong,E.F. and Beja,O. Environ. Microbiol. 5 (10), 842849 (2003) 14510837 PCR amplified from plankton DNA extracts ATGGGTAAAAGATTAGTGATCTTAGGCGGTGTTATTGCGCTTCCTTCGTTTGCTGCAAGTGGAGGCGATCTTGATTCTAGTGATCTTACTGGAGTATCTTTTTGGCTTGTTACTGCTGCTCTCTTAGCTGCTACTGTTTTCTTTTTTGTTGAAAGAGATCAAGTAAGCGCTAAATGGAAAACATCACTTACAGTTTCTGGTTTAGTTACTGGTATTGCATTCTGGCATTATCTCTATATGAGAGGTGTGTGGATCGAAACCGGTGAAACACCAACAGTATTTAGATATATTGATTGGTTGCTAACTGTTCCGTTACTAATGGTTGAGTTCTACTTAATCCTCGCAGCTTGCACTAATGTTGCAGGTTCATTATTTAAGAAACTACTAATTGGTTCGCTTGTAATGCTTATTGCAGGATATATGGGTGAGTCTGGAAATCTTCCAGTATTGCCTGCATTCCTTATTGGGTGCGCAGCATGGTTATACATGATTTATGAACTATATGCTGGTGAAGGTAAGGCTGCAGTTACTACTGCTAGTCCTGCTGTTATGTCTGCATACAATACTATGATGTTGATTATCGTAGTAGGTTGGGCAATATACCCAGCTGGATATGCTGCTGGTTACTTAATGGGTGGAGATGGCGTATATGCTCAGAATTTAAACGTTATATATAACCTTGCTGACTTTGTTAACAAGATTTTATTTGGTTTAGTTATCTGGCATGTTGCTGTTAAAGAATCTTCTAATGCT MGKRLVILGGVIALPSFAASGGDLDSSDLTGVSFWLVTAALLAATVFFFVERDQVSAKWKTSLTVSGLVTGIAFWHYLYMRGVWIETGETPTVFRYIDWLLTVPLLMVEFYLILAACTNVAGSLFKKLLIGSLVMLIAGYMGESGNLPVLPAFLIGCAAWLYMIYELYAGEGKAAVTTASPAVMSAYNTMMLIIVVGWAIYPAGYAAGYLMGGDGVYAQNLNVIYNLADFVNKILFGLVIWHVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAAAGATTAGTGATCTTAGGCGGTGTTATTGCGCTTCCTTCGTTTGCTGCA------AGTGGAGGCGATCTTGATTCTAGTGATCTTACTGGAGTATCTTTTTGGCTTGTTACTGCTGCTCTCTTAGCTGCTACTGTTTTCTTTTTTGTTGAAAGAGATCAAGTAAGCGCT---AAATGGAAAACATCACTTACAGTTTCTGGTTTAGTTACTGGTATTGCATTCTGGCATTATCTCTATATGAGAGGTGTGTGGATC------------------------------GAA---------------------ACCGGTGAAACACCAACAGTATTTAGATATATTGATTGG------------------------TTGCTAACTGTTCCGTTACTAATGGTTGAGTTCTACTTAATCCTCGCAGCT---------TGC---ACTAATGTTGCAGGT---TCATTA------------------------------------TTTAAGAAA---CTACTAATTGGTTCGCTTGTAATGCTTATTGCAGGATATATGGGTGAG---------TCT------------------GGA------AAT---------------------------------CTT------------------------------------------------------------------CCAGTA------------------TTGCCTGCA---TTCCTTATTGGGTGCGCAGCATGGTTATACATGATTTATGAACTA---------------TAT------GCT---GGTGAA---GGTAAGGCTGCAGTTACT------ACT---GCTAGTCCTGCTGTT---ATG---TCT---GCA---TAC---AAT---ACTATG---ATGTTGATTATCGTAGTA---------------------------------------------------------------GGTTGG---------GCAATATACCCAGCTGGATATGCTGCTGGTTACTTAATG---GGT------------------------------GGAGATGGCGTATATGCTCAGAATTTAAACGTTATATATAACCTTGCTGACTTTGTTAACAAGATTTTATTTGGTTTAGTTATCTGGCATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MGKRLVILGGVIALPSFAA--SGGDLDSSDLTGVSFWLVTAALLAATVFFFVERDQVSA-KWKTSLTVSGLVTGIAFWHYLYMRGVWI----------E-------TGETPTVFRYIDW--------LLTVPLLMVEFYLILAA---C-TNVAG-SL------------FKK-LLIGSLVMLIAGYMGE---S------G--N-----------L----------------------PV------LPA-FLIGCAAWLYMIYEL-----Y--A-GE-GKAAVT--T-ASPAV-M-S-A-Y-N-TM-MLIIVV---------------------GW---AIYPAGYAAGYLM-G----------GDGVYAQNLNVIYNLADFVNKILFGLVIWHVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86b]_AY250733 [IV-Gamma5-SAR86b] clone_medA19_r9_9_partial_AY250733 gi|29470263|gb|AY250733| Uncultured bacterium clone medA19 r9 9 proteorhodopsin gene, partial cds Uncultured bacterium clone medA19 r9 9 proteorhodopsin gene, partial cds AY250733 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 20-Apr-2004 #na collected_from_a_depth_of_100_m_at_a_station_in_the_Alboran_Sea_[30_N/4.25_W]_in_May_1998 Mediterranean Sea marine 36 -4.25 Novel Proteorhodopsin variants from the Mediterranean and Red Seas Sabehi,G., Massana,R., Bielawski,J.P., Rosenberg,M., Delong,E.F. and Beja,O. Environ. Microbiol. 5 (10), 842849 (2003) 14510837 PCR amplified from plankton DNA extracts TTATTGATATTAGGTGGTGTTATTGCACTTCCTTCGTTTGCTGCAAGTGGGGGCGATCTTGATTCTAGTGATCTTACTGGAGTTTCTTTTTGGCTTGTTACTGCTGCTCTCTTAGCTGCTACTGTTTTCTTTTTTGTTGAAAGAGATCAAGTAAGTGCTAAATGGAAAACATCACTTACAGTTTCTGGTTTAGTTACTGGTATTGCATTCTGGCATTATCTTTATATGAGAGGTGTGTGGATCGAAACTGGTGAAACGCCAACAGTATTTAGATATATTGATTGGTTGCTAACTGTTCCTTTGCTAATGGTTGAGTTCTACTTAATCCTTGCAGCGTGCACAAATGTTGCGGGTTCATTATTTAAGAAACTACTTGGTGGTTCGCTTGTAATGCTTATTGCAGGATATATGGGTGAGTCTGGAAGTCTTCCAGTATTGCCTGCATTCATTGTTGGGTGCTTAGCATGGTTCTACATGATTTATGAACTATATGCTGGTGAAGGTAAGGCTGCAGTTACTACTGCTAGTCCTGCTGTTATGTCTGCATACAATACTATGATGTTGATTATCGTAGTAGGTTGGGCAATTTACCCAGCTGGATATGCTGCTGGTTACCTAATGGGTGGTGATGGCGTATATGCTCAGAATTTAAACGTTATATATAACCTTGCTGACTTTGTTAACAAGATTTTATTTGGTTTAGTTATCTGGCATGTTGCTGTTAAAGAATCTTCTAATGCT LLILGGVIALPSFAASGGDLDSSDLTGVSFWLVTAALLAATVFFFVERDQVSAKWKTSLTVSGLVTGIAFWHYLYMRGVWIETGETPTVFRYIDWLLTVPLLMVEFYLILAACTNVAGSLFKKLLGGSLVMLIAGYMGESGSLPVLPAFIVGCLAWFYMIYELYAGEGKAAVTTASPAVMSAYNTMMLIIVVGWAIYPAGYAAGYLMGGDGVYAQNLNVIYNLADFVNKILFGLVIWHVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTGATATTAGGTGGTGTTATTGCACTTCCTTCGTTTGCTGCA------AGTGGGGGCGATCTTGATTCTAGTGATCTTACTGGAGTTTCTTTTTGGCTTGTTACTGCTGCTCTCTTAGCTGCTACTGTTTTCTTTTTTGTTGAAAGAGATCAAGTAAGTGCT---AAATGGAAAACATCACTTACAGTTTCTGGTTTAGTTACTGGTATTGCATTCTGGCATTATCTTTATATGAGAGGTGTGTGGATC------------------------------GAA---------------------ACTGGTGAAACGCCAACAGTATTTAGATATATTGATTGG------------------------TTGCTAACTGTTCCTTTGCTAATGGTTGAGTTCTACTTAATCCTTGCAGCG---------TGC---ACAAATGTTGCGGGT---TCATTA------------------------------------TTTAAGAAA---CTACTTGGTGGTTCGCTTGTAATGCTTATTGCAGGATATATGGGTGAG---------TCT------------------GGA------AGT---------------------------------CTT------------------------------------------------------------------CCAGTA------------------TTGCCTGCA---TTCATTGTTGGGTGCTTAGCATGGTTCTACATGATTTATGAACTA---------------TAT------GCT---GGTGAA---GGTAAGGCTGCAGTTACT------ACT---GCTAGTCCTGCTGTT---ATG---TCT---GCA---TAC---AAT---ACTATG---ATGTTGATTATCGTAGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCAGCTGGATATGCTGCTGGTTACCTAATG---GGT------------------------------GGTGATGGCGTATATGCTCAGAATTTAAACGTTATATATAACCTTGCTGACTTTGTTAACAAGATTTTATTTGGTTTAGTTATCTGGCATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------LLILGGVIALPSFAA--SGGDLDSSDLTGVSFWLVTAALLAATVFFFVERDQVSA-KWKTSLTVSGLVTGIAFWHYLYMRGVWI----------E-------TGETPTVFRYIDW--------LLTVPLLMVEFYLILAA---C-TNVAG-SL------------FKK-LLGGSLVMLIAGYMGE---S------G--S-----------L----------------------PV------LPA-FIVGCLAWFYMIYEL-----Y--A-GE-GKAAVT--T-ASPAV-M-S-A-Y-N-TM-MLIIVV---------------------GW---AIYPAGYAAGYLM-G----------GDGVYAQNLNVIYNLADFVNKILFGLVIWHVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86b]_EU915938 [IV-Gamma5-SAR86b] clone_2H001-4_EU915938 gi|229358758|gb|EU915938| Uncultured bacterium clone 2H001-4 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 2H001-4 putative proteorhodopsin gene, partial cds. EU915938 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTAGCCGCTACTGTCTTCTTCTTTGTTGAAAGAGACCAAGTTAGTGCTAAGTGGAAAACATCGCTTACAGTTTCTGGTTTAGTGACTGGTATAGCATTCTGGCATTATCTCTATATGAGGGGTGTTTGGATCGGTGAAACGCCAACAGTATTCAGATATATTGACTGGTTATTAACTGTTCCATTGCTGATGGTTGAGTTCTACTTAATTCTTGCTGCATGTAATGTTGCAGGTTCATTATTCAAGAAATTGCTTGGCGGTTCGCTAATAATGCTTTTATTTGGATACATGGGTGAAGCTGAAATTATGGGAGCATTACCTGCATTTGTTGTTGCAATGGCTGCATGGTTATACATGATCCACACTCTATACTTGGGTGAAGGAAAAGCTGCTGTAAGTACTGCAAGTCCTGCTGTTATGTCTGCATACAATACTATGATGTTAATTATAGTAGTTGGTTGGGCTATATAC MVAATVFFFVERDQVSAKWKTSLTVSGLVTGIAFWHYLYMRGVWIGETPTVFRYIDWLLTVPLLMVEFYLILAACNVAGSLFKKLLGGSLIMLLFGYMGEAEIMGALPAFVVAMAAWLYMIHTLYLGEGKAAVSTASPAVMSAYNTMMLIIVVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTCTTCTTCTTTGTTGAAAGAGACCAAGTTAGTGCT---AAGTGGAAAACATCGCTTACAGTTTCTGGTTTAGTGACTGGTATAGCATTCTGGCATTATCTCTATATGAGGGGTGTTTGGATC---------------------------------------------------------GGTGAAACGCCAACAGTATTCAGATATATTGACTGG------------------------TTATTAACTGTTCCATTGCTGATGGTTGAGTTCTACTTAATTCTTGCTGCA---------TGT------AATGTTGCAGGT---TCATTA------------------------------------TTCAAGAAA---TTGCTTGGCGGTTCGCTAATAATGCTTTTATTTGGATACATGGGTGAA---------GCT------------------GAA------ATT---------------------------------ATG------------------------------------------------------------------GGAGCA------------------TTACCTGCA---TTTGTTGTTGCAATGGCTGCATGGTTATACATGATCCACACTCTA---------------TAC------TTG---GGTGAA---GGAAAAGCTGCTGTAAGT------ACT---GCAAGTCCTGCTGTT---ATG---TCT---GCA---TAC---AAT---ACTATG---ATGTTAATTATAGTAGTT---------------------------------------------------------------GGTTGG---------GCTATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFVERDQVSA-KWKTSLTVSGLVTGIAFWHYLYMRGVWI-------------------GETPTVFRYIDW--------LLTVPLLMVEFYLILAA---C--NVAG-SL------------FKK-LLGGSLIMLLFGYMGE---A------E--I-----------M----------------------GA------LPA-FVVAMAAWLYMIHTL-----Y--L-GE-GKAAVS--T-ASPAV-M-S-A-Y-N-TM-MLIIVV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86b]_1105123410616 [IV-Gamma5-SAR86b] JCVI_ORF_1105123410616_GS007_Coastal_1m jcvi|1105123410616| 1105123410616 JCVI ORF 1105123410616 1105123410616 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 25-AUG-2003 Coastal/1m_depth/S_31.7_psu/GS007/Northern_Gulf_of_Maine/North_American_East_Coast Atlantic Ocean marine 43.63222 -66.84722 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAATTGTTATTATTATTGACGAGTGCTGTAGCACTTCCATCATTCGCTGCAAGTGGCGGTGATCTTCAAGCTAGTGACCTTACTGGTGTTTCATTTTGGCTAGTTACTGCGGCTTTATTAGCAGCAACTGTCTTTTTCTTTGTAGAAAGAGATCAAGTAAGCTCAAAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTTTGGCATTACTTGTACATGAGAGGTGTATGGATTGATACTGGTGAAACACCAACAGTATTTAGATATATCGATTGGTTATTAACTGTTCCATTATTAATGGTTGAGTTCTACTTAATTCTTGCTGCATGTACTAATGTTGCAGGTTCATTATTCAAAAAATTACTTGGCGGTTCGCTAGTAATGCTTTTATTTGGATACATGGGTGAAGCTGGAATTATGGGAGCATTACCTGCATTTGTTGTTGCAATGGTTGCATGGTTATACATGATCCACACTCTATACATGGGTGAAGGAAAAGCTGCTGTACAGACTGCAAGTCCTGCTGTTATGTCTGCATACAACACTATGATGTTAATTATAGTATTTGGTTGGGCTATATACCCAGCTGGATATGCTGCTGGTTACCTAATGGGTGGCGAAGGCGTATATGCTGCTAACTTAAACATCGTATATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAGTTATCTGGCATGTTGCAGTAAAGAATCTGCATCTGCTGCACCGT MKLLLLLTSAVALPSFAASGGDLQASDLTGVSFWLVTAALLAATVFFFVERDQVSSKWKTSLTVSGLVTGIAFWHYLYMRGVWIDTGETPTVFRYIDWLLTVPLLMVEFYLILAACTNVAGSLFKKLLGGSLVMLLFGYMGEAGIMGALPAFVVAMVAWLYMIHTLYMGEGKAAVQTASPAVMSAYNTMMLIIVFGWAIYPAGYAAGYLMGGEGVYAANLNIVYNLADFVNKILFGLVIWHVAVKNLHLLHR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAATTGTTATTATTATTGACGAGTGCTGTAGCACTTCCATCATTCGCTGCA------AGTGGCGGTGATCTTCAAGCTAGTGACCTTACTGGTGTTTCATTTTGGCTAGTTACTGCGGCTTTATTAGCAGCAACTGTCTTTTTCTTTGTAGAAAGAGATCAAGTAAGCTCA---AAATGGAAAACATCATTAACTGTATCTGGTCTTGTTACTGGTATTGCTTTTTGGCATTACTTGTACATGAGAGGTGTATGGATT------------------------------GAT---------------------ACTGGTGAAACACCAACAGTATTTAGATATATCGATTGG------------------------TTATTAACTGTTCCATTATTAATGGTTGAGTTCTACTTAATTCTTGCTGCA---------TGT---ACTAATGTTGCAGGT---TCATTA------------------------------------TTCAAAAAA---TTACTTGGCGGTTCGCTAGTAATGCTTTTATTTGGATACATGGGTGAA---------GCT------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------GGAGCA------------------TTACCTGCA---TTTGTTGTTGCAATGGTTGCATGGTTATACATGATCCACACTCTA---------------TAC------ATG---GGTGAA---GGAAAAGCTGCTGTACAG------ACT---GCAAGTCCTGCTGTT---ATG---TCT---GCA---TAC---AAC---ACTATG---ATGTTAATTATAGTATTT---------------------------------------------------------------GGTTGG---------GCTATATACCCAGCTGGATATGCTGCTGGTTACCTAATG---GGT------------------------------GGCGAAGGCGTATATGCTGCTAACTTAAACATCGTATATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTAGTTATCTGGCATGTTGCAGTAAAGAAT---CTGCATCTGCTGCACCGT--------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------MKLLLLLTSAVALPSFAA--SGGDLQASDLTGVSFWLVTAALLAATVFFFVERDQVSS-KWKTSLTVSGLVTGIAFWHYLYMRGVWI----------D-------TGETPTVFRYIDW--------LLTVPLLMVEFYLILAA---C-TNVAG-SL------------FKK-LLGGSLVMLLFGYMGE---A------G--I-----------M----------------------GA------LPA-FVVAMVAWLYMIHTL-----Y--M-GE-GKAAVQ--T-ASPAV-M-S-A-Y-N-TM-MLIIVF---------------------GW---AIYPAGYAAGYLM-G----------GEGVYAANLNIVYNLADFVNKILFGLVIWHVAVKN-LHLLHR----------------------------------- [IV-Gamma5-SAR86b]_AF349997 [IV-Gamma5-SAR86b] clone_PalB5_AF349997 gi|13560760|gb|AF349997| Uncultured bacterium clone PalB5 proteorhodopsin gene, partial cds. Uncultured bacterium clone PalB5 proteorhodopsin gene, partial cds. AF349997 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 11-MAY-2004 #na #na Antarctic Ocean marine -64.4 -64 Proteorhodopsin phototrophy in the ocean Beja,O., Spudich,E.N., Spudich,J.L., Leclerc,M. and DeLong,E.F. Nature 411 (6839), 786-789 (2001) 11459054 #na ACCATGGGTAAATTATTACTGATATTAGGTAGTGCTATTGCACTTCCATCATTTGCTGCTGCTGGTGGCGATCTAGATATAAGTGATACTGTTGGTGTTTCATTCTGGCTGGTTACAGCTGGTATGTTAGCGGCAACTGTGTTCTTTTTTGTAGAAAGAGACCAAGTCAGCGCTAAGTGGAAAACTTCACTTACTGTATCTGGTTTAATTACTGGTATAGCCTTTTGGCATTATCTCTATATGAGAGGTGTTTGGATAGACACTGGTGATACCCCAACAGTATTCAGATATATTGATTGGTTATTAACTGTTCCATTACAAATGGTTGAGTTCTATCTAATTCTTGCTGCTTGTACAAATGTTGCTGCTTCATTATTTAAGAAGCTTCTAGCTGGTTCATTAGTAATGTTAGGTGCTGGATTTGCAGGCGAAGCTGGATTAGCTCCTGTATGGCCTGCTTTCATTATTGGTATGGCTGGATGGTTATACATGATTTATGAGCTATATATGGGTGAAGGTAAGGCTGCTGTAAGTACTGCAAGTCCTGCTGTTAACTCTGCATACAACGCAATGATGATGATTATTGTTGTTGGATGGGCAATTTATCCTGCTGGATATGCTGCTGGTTACCTAATGGGTGGCGAAGGTGTATACGCTTCAAACCTAAACCTTATATATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTGATCATTTGGAATGTTGCTGTTAAAGAATCTTCTAATGCT TMGKLLLILGSAIALPSFAAAGGDLDISDTVGVSFWLVTAGMLAATVFFFVERDQVSAKWKTSLTVSGLITGIAFWHYLYMRGVWIDTGDTPTVFRYIDWLLTVPLQMVEFYLILAACTNVAASLFKKLLAGSLVMLGAGFAGEAGLAPVWPAFIIGMAGWLYMIYELYMGEGKAAVSTASPAVNSAYNAMMMIIVVGWAIYPAGYAAGYLMGGEGVYASNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCATGGGTAAATTATTACTGATATTAGGTAGTGCTATTGCACTTCCATCATTTGCTGCT------GCTGGTGGCGATCTAGATATAAGTGATACTGTTGGTGTTTCATTCTGGCTGGTTACAGCTGGTATGTTAGCGGCAACTGTGTTCTTTTTTGTAGAAAGAGACCAAGTCAGCGCT---AAGTGGAAAACTTCACTTACTGTATCTGGTTTAATTACTGGTATAGCCTTTTGGCATTATCTCTATATGAGAGGTGTTTGGATA------------------------------GAC---------------------ACTGGTGATACCCCAACAGTATTCAGATATATTGATTGG------------------------TTATTAACTGTTCCATTACAAATGGTTGAGTTCTATCTAATTCTTGCTGCT---------TGT---ACAAATGTTGCTGCT---TCATTA------------------------------------TTTAAGAAG---CTTCTAGCTGGTTCATTAGTAATGTTAGGTGCTGGATTTGCAGGCGAA---------GCT------------------GGA------TTA---------------------------------GCT------------------------------------------------------------------CCTGTA------------------TGGCCTGCT---TTCATTATTGGTATGGCTGGATGGTTATACATGATTTATGAGCTA---------------TAT------ATG---GGTGAA---GGTAAGGCTGCTGTAAGT------ACT---GCAAGTCCTGCTGTT---AAC---TCT---GCA---TAC---AAC---GCAATG---ATGATGATTATTGTTGTT---------------------------------------------------------------GGATGG---------GCAATTTATCCTGCTGGATATGCTGCTGGTTACCTAATG---GGT------------------------------GGCGAAGGTGTATACGCTTCAAACCTAAACCTTATATATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTGATCATTTGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------TMGKLLLILGSAIALPSFAA--AGGDLDISDTVGVSFWLVTAGMLAATVFFFVERDQVSA-KWKTSLTVSGLITGIAFWHYLYMRGVWI----------D-------TGDTPTVFRYIDW--------LLTVPLQMVEFYLILAA---C-TNVAA-SL------------FKK-LLAGSLVMLGAGFAGE---A------G--L-----------A----------------------PV------WPA-FIIGMAGWLYMIYEL-----Y--M-GE-GKAAVS--T-ASPAV-N-S-A-Y-N-AM-MMIIVV---------------------GW---AIYPAGYAAGYLM-G----------GEGVYASNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86b]_AF349998 [IV-Gamma5-SAR86b] clone_PalB6_AF349998 gi|13560762|gb|AF349998| Uncultured bacterium clone PalB6 proteorhodopsin gene, partial cds. Uncultured bacterium clone PalB6 proteorhodopsin gene, partial cds. AF349998 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 11-MAY-2004 #na #na Antarctic Ocean marine -64.4 -64 Proteorhodopsin phototrophy in the ocean Beja,O., Spudich,E.N., Spudich,J.L., Leclerc,M. and DeLong,E.F. Nature 411 (6839), 786-789 (2001) 11459054 #na ACCATGGGTAAATTATTACTGATATTAGGTAGTGCTATTGCACTTCCATCATTTGCTGCTGCTGGTGGCGATCTAGATATAAGTGATACTGTTGGTGTTTCATTCTGGCTGGTTACAGCTGGTATGTTAGCGGCAACTGTGTTCTTTTTTGTAGAAAGAGACCAAGTCAGCGCTAAGTGGAAAACTTCACTTACTGTATCTGGTTTAATTACTGGTATAGCTTTTTGGCATTATCTCTATATGAGAGGTGTTTGGATAGACACTGGTGATACCCCAACAGTATTCAGATATATTGATTGGTTATTAACTGTTCCATTACAAATGGTTGAGTTCTATCTAATTCTTGCTGCTTGTACAAATGTTGCTGCTTCATTATTTAAGAAGCTTCTAGCTGGTTCATTAGTAATGTTAGGTGCTGGATTTGCAGGCGAAGCTGGATTAGCTCCTGTATGGCCTGCTTTCATTATTGGTATGGCTGGATGGTTATACATGATTTATGAGCTATATATGGGTGAAGGTAAGGCTGCTGTAAGTACTGCAAGTCCTGCTGTTAACTCTGCATACAACGCAATGATGGTGATTATTGTTGTTGGATGGGCAATTTATCCTGCTGGATATGCTGCTGGTTACCTAATGGGTGGCGAAGGTGTATACGCTTCAAACCTAAACCTTATATATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTGATCATTTGGAATGTTGCTGTTAAAGAATCTTCTAATGCT TMGKLLLILGSAIALPSFAAAGGDLDISDTVGVSFWLVTAGMLAATVFFFVERDQVSAKWKTSLTVSGLITGIAFWHYLYMRGVWIDTGDTPTVFRYIDWLLTVPLQMVEFYLILAACTNVAASLFKKLLAGSLVMLGAGFAGEAGLAPVWPAFIIGMAGWLYMIYELYMGEGKAAVSTASPAVNSAYNAMMVIIVVGWAIYPAGYAAGYLMGGEGVYASNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCATGGGTAAATTATTACTGATATTAGGTAGTGCTATTGCACTTCCATCATTTGCTGCT------GCTGGTGGCGATCTAGATATAAGTGATACTGTTGGTGTTTCATTCTGGCTGGTTACAGCTGGTATGTTAGCGGCAACTGTGTTCTTTTTTGTAGAAAGAGACCAAGTCAGCGCT---AAGTGGAAAACTTCACTTACTGTATCTGGTTTAATTACTGGTATAGCTTTTTGGCATTATCTCTATATGAGAGGTGTTTGGATA------------------------------GAC---------------------ACTGGTGATACCCCAACAGTATTCAGATATATTGATTGG------------------------TTATTAACTGTTCCATTACAAATGGTTGAGTTCTATCTAATTCTTGCTGCT---------TGT---ACAAATGTTGCTGCT---TCATTA------------------------------------TTTAAGAAG---CTTCTAGCTGGTTCATTAGTAATGTTAGGTGCTGGATTTGCAGGCGAA---------GCT------------------GGA------TTA---------------------------------GCT------------------------------------------------------------------CCTGTA------------------TGGCCTGCT---TTCATTATTGGTATGGCTGGATGGTTATACATGATTTATGAGCTA---------------TAT------ATG---GGTGAA---GGTAAGGCTGCTGTAAGT------ACT---GCAAGTCCTGCTGTT---AAC---TCT---GCA---TAC---AAC---GCAATG---ATGGTGATTATTGTTGTT---------------------------------------------------------------GGATGG---------GCAATTTATCCTGCTGGATATGCTGCTGGTTACCTAATG---GGT------------------------------GGCGAAGGTGTATACGCTTCAAACCTAAACCTTATATATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTGATCATTTGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------TMGKLLLILGSAIALPSFAA--AGGDLDISDTVGVSFWLVTAGMLAATVFFFVERDQVSA-KWKTSLTVSGLITGIAFWHYLYMRGVWI----------D-------TGDTPTVFRYIDW--------LLTVPLQMVEFYLILAA---C-TNVAA-SL------------FKK-LLAGSLVMLGAGFAGE---A------G--L-----------A----------------------PV------WPA-FIIGMAGWLYMIYEL-----Y--M-GE-GKAAVS--T-ASPAV-N-S-A-Y-N-AM-MVIIVV---------------------GW---AIYPAGYAAGYLM-G----------GEGVYASNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86b]_AF349982 [IV-Gamma5-SAR86b] clone_HOT_75m8_AF349982 gi|13560730|gb|AF349982| Uncultured bacterium clone HOT 75m8 proteorhodopsin gene, partial cds. Uncultured bacterium clone HOT 75m8 proteorhodopsin gene, partial cds. AF349982 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 11-MAY-2004 #na #na Pacific Ocean marine 22.4 -158 Proteorhodopsin phototrophy in the ocean Beja,O., Spudich,E.N., Spudich,J.L., Leclerc,M. and DeLong,E.F. Nature 411 (6839), 786-789 (2001) 11459054 #na ACCATGGGTAAATTATTACTGATATTAGGTAGTGCTATTGCACTTCCATCATTTGCTGCTGCTGGTGGCGATCTAGATATAAGTGATACTGTTGGTGTTTCATTCTGGCTGGTTACAGCTGGTATGTTAGCGGCAACTGTGTTCTTTTTTGTAGAAAGAGACCAAGTCAGCGCTAAGTGGAAAACTTCACTTACTGTATCTGGTTTAATTACTGGTATAGCTTTTTGGCATTATCTCTATATGAGAGGTGTTTGGATAGACACTGGTGATACCCCAACAGTATTCAGATATATTGATTGGTTATTAACTGTTCCATTACAAATGGTTGAGTTCTATCTAATTCTTGCTGCTTGTACAAATGTTGCTGCTTCATTATTTAAGAAGCTTCTAGCTGGTTCATTAGTAATGTTAGGTGCTGGATTTGCAGGCGAAGCTGGATTGGCTCCTGTATGGCCTGCTTTCATTATTGGTATGGCTGGATGGTTATACATGATTTATGAGCTATATATGGGTGAAGGTAAGGCTGCTGTAAGTACTGCAAGTCCTGCTGTTAACTCTGCATACAACGCAATGATGGTGATTATTGTTGTTGGATGGGCAATTTATCCTGCTGGATATGCTGCTGGTTACCTAATGGGTGGCGAAGGTGTATACGCTTCAAACTTAAACCTTATATATAACCTTGCCGACCTTGTTAACAAGATTCTATTTGGTTTGATCATTTGGAATGTTGCTGTTAAAGAATCTTCTAATGCT TMGKLLLILGSAIALPSFAAAGGDLDISDTVGVSFWLVTAGMLAATVFFFVERDQVSAKWKTSLTVSGLITGIAFWHYLYMRGVWIDTGDTPTVFRYIDWLLTVPLQMVEFYLILAACTNVAASLFKKLLAGSLVMLGAGFAGEAGLAPVWPAFIIGMAGWLYMIYELYMGEGKAAVSTASPAVNSAYNAMMVIIVVGWAIYPAGYAAGYLMGGEGVYASNLNLIYNLADLVNKILFGLIIWNVAVKESSNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCATGGGTAAATTATTACTGATATTAGGTAGTGCTATTGCACTTCCATCATTTGCTGCT------GCTGGTGGCGATCTAGATATAAGTGATACTGTTGGTGTTTCATTCTGGCTGGTTACAGCTGGTATGTTAGCGGCAACTGTGTTCTTTTTTGTAGAAAGAGACCAAGTCAGCGCT---AAGTGGAAAACTTCACTTACTGTATCTGGTTTAATTACTGGTATAGCTTTTTGGCATTATCTCTATATGAGAGGTGTTTGGATA------------------------------GAC---------------------ACTGGTGATACCCCAACAGTATTCAGATATATTGATTGG------------------------TTATTAACTGTTCCATTACAAATGGTTGAGTTCTATCTAATTCTTGCTGCT---------TGT---ACAAATGTTGCTGCT---TCATTA------------------------------------TTTAAGAAG---CTTCTAGCTGGTTCATTAGTAATGTTAGGTGCTGGATTTGCAGGCGAA---------GCT------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCTGTA------------------TGGCCTGCT---TTCATTATTGGTATGGCTGGATGGTTATACATGATTTATGAGCTA---------------TAT------ATG---GGTGAA---GGTAAGGCTGCTGTAAGT------ACT---GCAAGTCCTGCTGTT---AAC---TCT---GCA---TAC---AAC---GCAATG---ATGGTGATTATTGTTGTT---------------------------------------------------------------GGATGG---------GCAATTTATCCTGCTGGATATGCTGCTGGTTACCTAATG---GGT------------------------------GGCGAAGGTGTATACGCTTCAAACTTAAACCTTATATATAACCTTGCCGACCTTGTTAACAAGATTCTATTTGGTTTGATCATTTGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------TMGKLLLILGSAIALPSFAA--AGGDLDISDTVGVSFWLVTAGMLAATVFFFVERDQVSA-KWKTSLTVSGLITGIAFWHYLYMRGVWI----------D-------TGDTPTVFRYIDW--------LLTVPLQMVEFYLILAA---C-TNVAA-SL------------FKK-LLAGSLVMLGAGFAGE---A------G--L-----------A----------------------PV------WPA-FIIGMAGWLYMIYEL-----Y--M-GE-GKAAVS--T-ASPAV-N-S-A-Y-N-AM-MVIIVV---------------------GW---AIYPAGYAAGYLM-G----------GEGVYASNLNLIYNLADLVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86b]_AF349979 [IV-Gamma5-SAR86b] clone_HOT_75m1_AF349979 gi|13560724|gb|AF349979| Uncultured bacterium clone HOT 75m1 proteorhodopsin gene, partial cds. Uncultured bacterium clone HOT 75m1 proteorhodopsin gene, partial cds. AF349979 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 11-MAY-2004 #na #na Pacific Ocean marine 22.4 -158 Proteorhodopsin phototrophy in the ocean Beja,O., Spudich,E.N., Spudich,J.L., Leclerc,M. and DeLong,E.F. Nature 411 (6839), 786-789 (2001) 11459054 #na ACCATGGGTAAATTATTACTGATATTAGGTAGTGCTATTGCACTTCCATCATTTGCTGCTGCTGGTGGCGATCTAGATATAAGTGATACTGTTGGTGTTTCATTCTGGCTGGTTACAGCTGGTATGTTAGCGGCAACTGTGTTCTTTTTTGTAGAAAGAGACCAAGTCAGCGCTAAGTGGAAAACTTCACTTGCTGTATCTGGTTTAATTACTGGTATAGCTTTTTGGCATTATCTCTATATGAGAGGTGTTTGGATAGACACTGGTGATACCCCAACAGTATTCAGATATATTGATTGGTTATTAACTGTTCCATTACAAATGGTTGAGTTCTATCTAATTCTTGCTGCTTGTACAAGTGTTGCTGCTTCATTATTTAAGAAGCTTCTAGCTGGTTCATTAGTAATGTTAGGTGCTGGATTTGCAGGCGAAGCTGGATTAGCTCCTGTATTACCTGCTTTCATTATTGGTATGGCTGGATGGTTATACATGATTTATGAGCTATATATGGGTGAAGGTAAGGCTGCTGTAAGTACTGCAAGTCCTGCTGTTAACTCTGCATACAACGCAATGATGATGATTATTGTTGTTGGATGGGCAATTTATCCTGCTGGATATGCTGCTGGTTACCTAATGGGTGGCGAAGGTGTATACGCTTCAAACTTAAACCTTATATATAACCTTGCCGACCTTGTTAACAAGATTCTATTTGGTTTGATCATTTGGAATGTTGCTGTTAAAGAATCTTCTAATGCT TMGKLLLILGSAIALPSFAAAGGDLDISDTVGVSFWLVTAGMLAATVFFFVERDQVSAKWKTSLAVSGLITGIAFWHYLYMRGVWIDTGDTPTVFRYIDWLLTVPLQMVEFYLILAACTSVAASLFKKLLAGSLVMLGAGFAGEAGLAPVLPAFIIGMAGWLYMIYELYMGEGKAAVSTASPAVNSAYNAMMMIIVVGWAIYPAGYAAGYLMGGEGVYASNLNLIYNLADLVNKILFGLIIWNVAVKESSNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCATGGGTAAATTATTACTGATATTAGGTAGTGCTATTGCACTTCCATCATTTGCTGCT------GCTGGTGGCGATCTAGATATAAGTGATACTGTTGGTGTTTCATTCTGGCTGGTTACAGCTGGTATGTTAGCGGCAACTGTGTTCTTTTTTGTAGAAAGAGACCAAGTCAGCGCT---AAGTGGAAAACTTCACTTGCTGTATCTGGTTTAATTACTGGTATAGCTTTTTGGCATTATCTCTATATGAGAGGTGTTTGGATA------------------------------GAC---------------------ACTGGTGATACCCCAACAGTATTCAGATATATTGATTGG------------------------TTATTAACTGTTCCATTACAAATGGTTGAGTTCTATCTAATTCTTGCTGCT---------TGT---ACAAGTGTTGCTGCT---TCATTA------------------------------------TTTAAGAAG---CTTCTAGCTGGTTCATTAGTAATGTTAGGTGCTGGATTTGCAGGCGAA---------GCT------------------GGA------TTA---------------------------------GCT------------------------------------------------------------------CCTGTA------------------TTACCTGCT---TTCATTATTGGTATGGCTGGATGGTTATACATGATTTATGAGCTA---------------TAT------ATG---GGTGAA---GGTAAGGCTGCTGTAAGT------ACT---GCAAGTCCTGCTGTT---AAC---TCT---GCA---TAC---AAC---GCAATG---ATGATGATTATTGTTGTT---------------------------------------------------------------GGATGG---------GCAATTTATCCTGCTGGATATGCTGCTGGTTACCTAATG---GGT------------------------------GGCGAAGGTGTATACGCTTCAAACTTAAACCTTATATATAACCTTGCCGACCTTGTTAACAAGATTCTATTTGGTTTGATCATTTGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------TMGKLLLILGSAIALPSFAA--AGGDLDISDTVGVSFWLVTAGMLAATVFFFVERDQVSA-KWKTSLAVSGLITGIAFWHYLYMRGVWI----------D-------TGDTPTVFRYIDW--------LLTVPLQMVEFYLILAA---C-TSVAA-SL------------FKK-LLAGSLVMLGAGFAGE---A------G--L-----------A----------------------PV------LPA-FIIGMAGWLYMIYEL-----Y--M-GE-GKAAVS--T-ASPAV-N-S-A-Y-N-AM-MMIIVV---------------------GW---AIYPAGYAAGYLM-G----------GEGVYASNLNLIYNLADLVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86b]_AF350000 [IV-Gamma5-SAR86b] clone_PalB8_AF350000 gi|13560766|gb|AF350000| Uncultured bacterium clone PalB8 proteorhodopsin gene, partial cds. Uncultured bacterium clone PalB8 proteorhodopsin gene, partial cds. AF350000 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 11-MAY-2004 #na #na Antarctic Ocean marine -64.4 -64 Proteorhodopsin phototrophy in the ocean Beja,O., Spudich,E.N., Spudich,J.L., Leclerc,M. and DeLong,E.F. Nature 411 (6839), 786-789 (2001) 11459054 #na ACCATGGGTAAATTATTACTGATATTAGGTAGTGCTATTGCACTTCCATCATTTGCTGCTGCTGGTGGCGATCTAGATATAAGTGATACTGTTGGTGTTTCATTCTGGCTGGTTACAGCTGGTATGTTAGCGGCAACTGTGTTCTTTTTTGTAGAAAGAGACCAAGTCAGCGCTAAGTGGAAAACTTCACTTACTGTATCTGGTTTAATTACTGGTATAGCTTTTTGGCATTATCTCTATATGAGAGGTGTTTGGATAGACACTGGTGATACCCCAACAGTATTCAGATATATTGATTGGTTATTAACTGTTCCATTACAAATGGTTGAGTTCTATCTAATTCTTGCTGCTTGTACAAGTGTTGCTGCTTCATTATTTAAGAAGCTTCTAGCTGGTTCATTAGTAATGTTAGGTGCTGGATTTGCAGGCGAAGCTGGATTAGCTCCTGTATTACCTGCTTTCATTATTGGTATGGCTGGATGGTTATACATGATTTATGAGCTATATATGGGTGAAGGTAAGGCTGCTGTAAGTACTGCAAGTCCTGCTGTTAACTCTGCATACAACGCAATGATGATGATTATTGTTGTTGGATGGGCAATTTATCCTGCTGGATATGCTGCTGGTTACCTAATGGGTGGCGAAGGTGTATACGCTTCAAACTTAAACCTTATATATAACCTTGCTGACCTTGTTAACAAGATTCTATTTGGTTTGATCATTTGGAATGTTGCTGTTAAAGAATCTTCTAATGCT TMGKLLLILGSAIALPSFAAAGGDLDISDTVGVSFWLVTAGMLAATVFFFVERDQVSAKWKTSLTVSGLITGIAFWHYLYMRGVWIDTGDTPTVFRYIDWLLTVPLQMVEFYLILAACTSVAASLFKKLLAGSLVMLGAGFAGEAGLAPVLPAFIIGMAGWLYMIYELYMGEGKAAVSTASPAVNSAYNAMMMIIVVGWAIYPAGYAAGYLMGGEGVYASNLNLIYNLADLVNKILFGLIIWNVAVKESSNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCATGGGTAAATTATTACTGATATTAGGTAGTGCTATTGCACTTCCATCATTTGCTGCT------GCTGGTGGCGATCTAGATATAAGTGATACTGTTGGTGTTTCATTCTGGCTGGTTACAGCTGGTATGTTAGCGGCAACTGTGTTCTTTTTTGTAGAAAGAGACCAAGTCAGCGCT---AAGTGGAAAACTTCACTTACTGTATCTGGTTTAATTACTGGTATAGCTTTTTGGCATTATCTCTATATGAGAGGTGTTTGGATA------------------------------GAC---------------------ACTGGTGATACCCCAACAGTATTCAGATATATTGATTGG------------------------TTATTAACTGTTCCATTACAAATGGTTGAGTTCTATCTAATTCTTGCTGCT---------TGT---ACAAGTGTTGCTGCT---TCATTA------------------------------------TTTAAGAAG---CTTCTAGCTGGTTCATTAGTAATGTTAGGTGCTGGATTTGCAGGCGAA---------GCT------------------GGA------TTA---------------------------------GCT------------------------------------------------------------------CCTGTA------------------TTACCTGCT---TTCATTATTGGTATGGCTGGATGGTTATACATGATTTATGAGCTA---------------TAT------ATG---GGTGAA---GGTAAGGCTGCTGTAAGT------ACT---GCAAGTCCTGCTGTT---AAC---TCT---GCA---TAC---AAC---GCAATG---ATGATGATTATTGTTGTT---------------------------------------------------------------GGATGG---------GCAATTTATCCTGCTGGATATGCTGCTGGTTACCTAATG---GGT------------------------------GGCGAAGGTGTATACGCTTCAAACTTAAACCTTATATATAACCTTGCTGACCTTGTTAACAAGATTCTATTTGGTTTGATCATTTGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------TMGKLLLILGSAIALPSFAA--AGGDLDISDTVGVSFWLVTAGMLAATVFFFVERDQVSA-KWKTSLTVSGLITGIAFWHYLYMRGVWI----------D-------TGDTPTVFRYIDW--------LLTVPLQMVEFYLILAA---C-TSVAA-SL------------FKK-LLAGSLVMLGAGFAGE---A------G--L-----------A----------------------PV------LPA-FIIGMAGWLYMIYEL-----Y--M-GE-GKAAVS--T-ASPAV-N-S-A-Y-N-AM-MMIIVV---------------------GW---AIYPAGYAAGYLM-G----------GEGVYASNLNLIYNLADLVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86b]_AF349981 [IV-Gamma5-SAR86b] clone_HOT_75m4_AF349981 gi|13560728|gb|AF349981| Uncultured bacterium clone HOT 75m4 proteorhodopsin gene, partial cds. Uncultured bacterium clone HOT 75m4 proteorhodopsin gene, partial cds. AF349981 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 11-MAY-2004 #na #na Pacific Ocean marine 22.4 -158 Proteorhodopsin phototrophy in the ocean Beja,O., Spudich,E.N., Spudich,J.L., Leclerc,M. and DeLong,E.F. Nature 411 (6839), 786-789 (2001) 11459054 #na ACCATGGGTAAATTATTACTGATATTAGGTAGTGCTATTGCACTTCCATCATTTGCTGCTGCTGGTGGCGATCTAGATATAAGTGATACTGTTGGTGTTTCATTCTGGCTGGTTACAGCTGGTATGTTAGCGGCAACTGTGTTCTTTTTTGTAGAAAGAGACCAAGTCAGCGCTAAGTGGAAAACTTCACTTACTGTATCTGGTTTAATTACTGGTATAGCTTTTTGGCATTATCTCTATATGAGAGGTGTTTGGATAGACACTGGTGATACCCCAACAGTATTCAGATATATTGATTGGTTATTAACTGTTCCATTACAAGTGGTTGAGTTCTATCTAATTCTTGCTGCTTGTACAAGTGTTGCTGCTTCATTATTTAAGAAGCTTCTAGCTGGTTCATTAGTAATGTTAGGTGCTGGATTTGCAGGCGAAGCTGGATTAGCTCCTGTATTACCTGCTTTCATTATTGGTATGGCTGGATGGTTATACATGATTTATGAGCTATATATGGGTGAAGGTAAGGCTGCTGTAAGTACTGCAAGTCCTGCTGTTAACTCTGCATACAACGCAATGATGATGATTATTGTTGTTGGATGGGCAATTTATCCTGCTGGATATGCTGCTGGTTACCTAATGGGTGGCGAAGGTGTATACGCTTCAAACTTAAACCTTATATATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTGATCATTTGGAATGTTGCTGTTAAAGAATCTTCTAATGCT TMGKLLLILGSAIALPSFAAAGGDLDISDTVGVSFWLVTAGMLAATVFFFVERDQVSAKWKTSLTVSGLITGIAFWHYLYMRGVWIDTGDTPTVFRYIDWLLTVPLQVVEFYLILAACTSVAASLFKKLLAGSLVMLGAGFAGEAGLAPVLPAFIIGMAGWLYMIYELYMGEGKAAVSTASPAVNSAYNAMMMIIVVGWAIYPAGYAAGYLMGGEGVYASNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCATGGGTAAATTATTACTGATATTAGGTAGTGCTATTGCACTTCCATCATTTGCTGCT------GCTGGTGGCGATCTAGATATAAGTGATACTGTTGGTGTTTCATTCTGGCTGGTTACAGCTGGTATGTTAGCGGCAACTGTGTTCTTTTTTGTAGAAAGAGACCAAGTCAGCGCT---AAGTGGAAAACTTCACTTACTGTATCTGGTTTAATTACTGGTATAGCTTTTTGGCATTATCTCTATATGAGAGGTGTTTGGATA------------------------------GAC---------------------ACTGGTGATACCCCAACAGTATTCAGATATATTGATTGG------------------------TTATTAACTGTTCCATTACAAGTGGTTGAGTTCTATCTAATTCTTGCTGCT---------TGT---ACAAGTGTTGCTGCT---TCATTA------------------------------------TTTAAGAAG---CTTCTAGCTGGTTCATTAGTAATGTTAGGTGCTGGATTTGCAGGCGAA---------GCT------------------GGA------TTA---------------------------------GCT------------------------------------------------------------------CCTGTA------------------TTACCTGCT---TTCATTATTGGTATGGCTGGATGGTTATACATGATTTATGAGCTA---------------TAT------ATG---GGTGAA---GGTAAGGCTGCTGTAAGT------ACT---GCAAGTCCTGCTGTT---AAC---TCT---GCA---TAC---AAC---GCAATG---ATGATGATTATTGTTGTT---------------------------------------------------------------GGATGG---------GCAATTTATCCTGCTGGATATGCTGCTGGTTACCTAATG---GGT------------------------------GGCGAAGGTGTATACGCTTCAAACTTAAACCTTATATATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTGATCATTTGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------TMGKLLLILGSAIALPSFAA--AGGDLDISDTVGVSFWLVTAGMLAATVFFFVERDQVSA-KWKTSLTVSGLITGIAFWHYLYMRGVWI----------D-------TGDTPTVFRYIDW--------LLTVPLQVVEFYLILAA---C-TSVAA-SL------------FKK-LLAGSLVMLGAGFAGE---A------G--L-----------A----------------------PV------LPA-FIIGMAGWLYMIYEL-----Y--M-GE-GKAAVS--T-ASPAV-N-S-A-Y-N-AM-MMIIVV---------------------GW---AIYPAGYAAGYLM-G----------GEGVYASNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86b]_AF350001 [IV-Gamma5-SAR86b] clone_PalE1_AF350001 gi|13560768|gb|AF350001| Uncultured bacterium clone PalE1 proteorhodopsin gene, partial cds. Uncultured bacterium clone PalE1 proteorhodopsin gene, partial cds. AF350001 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 11-MAY-2004 #na #na Antarctic Ocean marine -64.4 -64 Proteorhodopsin phototrophy in the ocean Beja,O., Spudich,E.N., Spudich,J.L., Leclerc,M. and DeLong,E.F. Nature 411 (6839), 786-789 (2001) 11459054 #na ACCATGGGTAAATTATTACTGATATTAGGTAGTGCTATTGCACTTCCATCATTTGCTGCTGCTGGTGGCGATCTAGATATAAGTGATACTGTTGGTGTTTCATTCTGGCTGGTTACAGCTGGTATGTTAGCGGCAACTGTGTTCTTTTTTGTAGAAAGAGACCAAGTCAGCGCTAAGTGGAAAACTTCACTTACTGTATCTGGTTTAATTACTGGTATAGCTTTTTGGCATTATCTCTATATGAGAGGTGTTTGGATAGACACTGGTGATACCCCAACAGTATTCAGATATATTGATTGGTTATTAACTGTTCCATTACAAGTGGTTGAGTTCTATCTAATTCTTGCTGCTTGTACAAGTGTTGCTGCTTCATTATTTAAGAAGCTTCTAGCTGGTTCATTAGTAATGTTAGGTGCTGGATTTGCAGGCGAAGCTGGATTAGCTCCTGTATTACCTGCTTTCATTATTGGTATGGCTGGATGGTTATACATGATTTATGAGCTATATATGGGTGAAGGCAAGGCTGCTGTAAGTACTGCAAGTCCTGCTGTTAACCCTGCATACAACGCAATGATGATGATTATTGTTGTTGGATGGGCAATTTATCCTGCTGGATATGCTGCTGGTTACCTAATGGGTGGCGAAGGTGTATACGCTTCAAACTTAAACCTTATATATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTGATCATTTGGAATGTTGCTGTTAAAGAATCTTCTAATGCT TMGKLLLILGSAIALPSFAAAGGDLDISDTVGVSFWLVTAGMLAATVFFFVERDQVSAKWKTSLTVSGLITGIAFWHYLYMRGVWIDTGDTPTVFRYIDWLLTVPLQVVEFYLILAACTSVAASLFKKLLAGSLVMLGAGFAGEAGLAPVLPAFIIGMAGWLYMIYELYMGEGKAAVSTASPAVNPAYNAMMMIIVVGWAIYPAGYAAGYLMGGEGVYASNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCATGGGTAAATTATTACTGATATTAGGTAGTGCTATTGCACTTCCATCATTTGCTGCT------GCTGGTGGCGATCTAGATATAAGTGATACTGTTGGTGTTTCATTCTGGCTGGTTACAGCTGGTATGTTAGCGGCAACTGTGTTCTTTTTTGTAGAAAGAGACCAAGTCAGCGCT---AAGTGGAAAACTTCACTTACTGTATCTGGTTTAATTACTGGTATAGCTTTTTGGCATTATCTCTATATGAGAGGTGTTTGGATA------------------------------GAC---------------------ACTGGTGATACCCCAACAGTATTCAGATATATTGATTGG------------------------TTATTAACTGTTCCATTACAAGTGGTTGAGTTCTATCTAATTCTTGCTGCT---------TGT---ACAAGTGTTGCTGCT---TCATTA------------------------------------TTTAAGAAG---CTTCTAGCTGGTTCATTAGTAATGTTAGGTGCTGGATTTGCAGGCGAA---------GCT------------------GGA------TTA---------------------------------GCT------------------------------------------------------------------CCTGTA------------------TTACCTGCT---TTCATTATTGGTATGGCTGGATGGTTATACATGATTTATGAGCTA---------------TAT------ATG---GGTGAA---GGCAAGGCTGCTGTAAGT------ACT---GCAAGTCCTGCTGTT---AAC---CCT---GCA---TAC---AAC---GCAATG---ATGATGATTATTGTTGTT---------------------------------------------------------------GGATGG---------GCAATTTATCCTGCTGGATATGCTGCTGGTTACCTAATG---GGT------------------------------GGCGAAGGTGTATACGCTTCAAACTTAAACCTTATATATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTGATCATTTGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------TMGKLLLILGSAIALPSFAA--AGGDLDISDTVGVSFWLVTAGMLAATVFFFVERDQVSA-KWKTSLTVSGLITGIAFWHYLYMRGVWI----------D-------TGDTPTVFRYIDW--------LLTVPLQVVEFYLILAA---C-TSVAA-SL------------FKK-LLAGSLVMLGAGFAGE---A------G--L-----------A----------------------PV------LPA-FIIGMAGWLYMIYEL-----Y--M-GE-GKAAVS--T-ASPAV-N-P-A-Y-N-AM-MMIIVV---------------------GW---AIYPAGYAAGYLM-G----------GEGVYASNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86b]_AF349996 [IV-Gamma5-SAR86b] clone_PalB2_AF349996 gi|13560758|gb|AF349996| Uncultured bacterium clone PalB2 proteorhodopsin gene, partial cds. Uncultured bacterium clone PalB2 proteorhodopsin gene, partial cds. AF349996 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 11-MAY-2004 #na #na Antarctic Ocean marine -64.4 -64 Proteorhodopsin phototrophy in the ocean Beja,O., Spudich,E.N., Spudich,J.L., Leclerc,M. and DeLong,E.F. Nature 411 (6839), 786-789 (2001) 11459054 #na ACCATGGGTAAATTATTACTGATATTAGGTAGTGCTATTGCACTTCCATCATTTGCTGCTGCTGGTGGCGATCTAGATATAAGTGATACTGTTGGTGTTTCATTCTGGCTGGTTACAGCTGGTATGTTAGCGGCAACTGTGTTCTTTTTTGTAGAAAGAGACCAAGTCAGCGCTGAGTGGAAAACTTCACTTACTGTATCTGGTTTAATTACTGGTATAGCTTTTTGGCATTATCTCTATATGAGAGGTGTTTGGATAGATACTGGTGATACCCCAACAGTATTCAGATATATTGATTGGTTATTAACTGTTCCATTACAAATGGTTGAGTTCTATCTAATTCTTGCTGCTTGTACAAGTGTTGCTGCTTCATTATTTAAGAAGCTTCTAGCTGGTTCATTAGTAATGTTAGGTGCTGGATTTGCAGGCGAAGCTGGATTAGCTCCTGTATTACCTGCTTTCATTATTGGTATGGCTGGATGGTTATACATGATTTATGAGCTATATATGGGTGAAGGTAAGGCTGCTGTAAGTACTGCAAGTCCTGCTGTTAACTCTGCATACAACGCAATGATGATGATTATTGTTGTTGGATGGGCAATTTATCCTGCTGGATATGCTGCTGGTTACCTAATGGGTGGCGAAGGTGTATACGCTTCAAACTTAAACCTTATATATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTGATCATTTGGAATGTTGCTGTTAAAGAATCTTCTAATGCT TMGKLLLILGSAIALPSFAAAGGDLDISDTVGVSFWLVTAGMLAATVFFFVERDQVSAEWKTSLTVSGLITGIAFWHYLYMRGVWIDTGDTPTVFRYIDWLLTVPLQMVEFYLILAACTSVAASLFKKLLAGSLVMLGAGFAGEAGLAPVLPAFIIGMAGWLYMIYELYMGEGKAAVSTASPAVNSAYNAMMMIIVVGWAIYPAGYAAGYLMGGEGVYASNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCATGGGTAAATTATTACTGATATTAGGTAGTGCTATTGCACTTCCATCATTTGCTGCT------GCTGGTGGCGATCTAGATATAAGTGATACTGTTGGTGTTTCATTCTGGCTGGTTACAGCTGGTATGTTAGCGGCAACTGTGTTCTTTTTTGTAGAAAGAGACCAAGTCAGCGCT---GAGTGGAAAACTTCACTTACTGTATCTGGTTTAATTACTGGTATAGCTTTTTGGCATTATCTCTATATGAGAGGTGTTTGGATA------------------------------GAT---------------------ACTGGTGATACCCCAACAGTATTCAGATATATTGATTGG------------------------TTATTAACTGTTCCATTACAAATGGTTGAGTTCTATCTAATTCTTGCTGCT---------TGT---ACAAGTGTTGCTGCT---TCATTA------------------------------------TTTAAGAAG---CTTCTAGCTGGTTCATTAGTAATGTTAGGTGCTGGATTTGCAGGCGAA---------GCT------------------GGA------TTA---------------------------------GCT------------------------------------------------------------------CCTGTA------------------TTACCTGCT---TTCATTATTGGTATGGCTGGATGGTTATACATGATTTATGAGCTA---------------TAT------ATG---GGTGAA---GGTAAGGCTGCTGTAAGT------ACT---GCAAGTCCTGCTGTT---AAC---TCT---GCA---TAC---AAC---GCAATG---ATGATGATTATTGTTGTT---------------------------------------------------------------GGATGG---------GCAATTTATCCTGCTGGATATGCTGCTGGTTACCTAATG---GGT------------------------------GGCGAAGGTGTATACGCTTCAAACTTAAACCTTATATATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTGATCATTTGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------TMGKLLLILGSAIALPSFAA--AGGDLDISDTVGVSFWLVTAGMLAATVFFFVERDQVSA-EWKTSLTVSGLITGIAFWHYLYMRGVWI----------D-------TGDTPTVFRYIDW--------LLTVPLQMVEFYLILAA---C-TSVAA-SL------------FKK-LLAGSLVMLGAGFAGE---A------G--L-----------A----------------------PV------LPA-FIIGMAGWLYMIYEL-----Y--M-GE-GKAAVS--T-ASPAV-N-S-A-Y-N-AM-MMIIVV---------------------GW---AIYPAGYAAGYLM-G----------GEGVYASNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86b]_AF350003 [IV-Gamma5-SAR86b] clone_PalE7_AF350003 gi|13560772|gb|AF350003| Uncultured bacterium clone PalE7 proteorhodopsin gene, partial cds. Uncultured bacterium clone PalE7 proteorhodopsin gene, partial cds. AF350003 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 11-MAY-2004 #na #na Antarctic Ocean marine -64.4 -64 Proteorhodopsin phototrophy in the ocean Beja,O., Spudich,E.N., Spudich,J.L., Leclerc,M. and DeLong,E.F. Nature 411 (6839), 786-789 (2001) 11459054 #na ACCATGGGTAAATTATTACTGATATTAGGTAGTGCTATTGCACTTCCATCATTTGCTGCTGCTGGTGGCGATCTAGATATAAGTGATACTGTTGGTGTTTCATTCTGGCTGGTTACAGCTGGTATGTTAGCGGCAACTGTGTTCTTTTTTGTAGAAAGAGACCAAGTCAGCGCTAAGTGGAAAACTTCACTTACTGTATCTGGTTTAATTACTGGTATAGCTTTTTGGCATTATCTCTATATGAGAGGTGTTTGGATAGATACTGGTGATACCCCAACAGTATTCAGATATATTGATTGGTTATTAACTGTTCCATTACAAATGGTTGAGTTCTATCTAATTCTTGCTGCTTGTACAAGTGTTGCTGCTTCATTATTTAAGAAGCTTCTAGCTGGTTCATTAGTAATGTTAGGTGCTGGATTTGCAGGCGAAGCTGGATTAGCTCCTGTATTACCTGCTTTCATTATTGGTATGGCTGGATGGCTATACATGATTTATGAGCTATATATGGGTGAAGGTAAGGCTGCTGTAAGTACTGCAAGTCCTGCTGTTAACTCTGCATACAACGCAATGATGATGATTATTGTTGTTGGATGGGCAATTTATCCTGCTGGATATGCTGCTGGTTACCTAATGGGTGGCGAAGGCGTATACGCTTCAAACTTAAACCTTATATATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTGATCATTTGGAATGTTGCTGTTAAAGAATCTTCTAATGCT TMGKLLLILGSAIALPSFAAAGGDLDISDTVGVSFWLVTAGMLAATVFFFVERDQVSAKWKTSLTVSGLITGIAFWHYLYMRGVWIDTGDTPTVFRYIDWLLTVPLQMVEFYLILAACTSVAASLFKKLLAGSLVMLGAGFAGEAGLAPVLPAFIIGMAGWLYMIYELYMGEGKAAVSTASPAVNSAYNAMMMIIVVGWAIYPAGYAAGYLMGGEGVYASNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCATGGGTAAATTATTACTGATATTAGGTAGTGCTATTGCACTTCCATCATTTGCTGCT------GCTGGTGGCGATCTAGATATAAGTGATACTGTTGGTGTTTCATTCTGGCTGGTTACAGCTGGTATGTTAGCGGCAACTGTGTTCTTTTTTGTAGAAAGAGACCAAGTCAGCGCT---AAGTGGAAAACTTCACTTACTGTATCTGGTTTAATTACTGGTATAGCTTTTTGGCATTATCTCTATATGAGAGGTGTTTGGATA------------------------------GAT---------------------ACTGGTGATACCCCAACAGTATTCAGATATATTGATTGG------------------------TTATTAACTGTTCCATTACAAATGGTTGAGTTCTATCTAATTCTTGCTGCT---------TGT---ACAAGTGTTGCTGCT---TCATTA------------------------------------TTTAAGAAG---CTTCTAGCTGGTTCATTAGTAATGTTAGGTGCTGGATTTGCAGGCGAA---------GCT------------------GGA------TTA---------------------------------GCT------------------------------------------------------------------CCTGTA------------------TTACCTGCT---TTCATTATTGGTATGGCTGGATGGCTATACATGATTTATGAGCTA---------------TAT------ATG---GGTGAA---GGTAAGGCTGCTGTAAGT------ACT---GCAAGTCCTGCTGTT---AAC---TCT---GCA---TAC---AAC---GCAATG---ATGATGATTATTGTTGTT---------------------------------------------------------------GGATGG---------GCAATTTATCCTGCTGGATATGCTGCTGGTTACCTAATG---GGT------------------------------GGCGAAGGCGTATACGCTTCAAACTTAAACCTTATATATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTGATCATTTGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------TMGKLLLILGSAIALPSFAA--AGGDLDISDTVGVSFWLVTAGMLAATVFFFVERDQVSA-KWKTSLTVSGLITGIAFWHYLYMRGVWI----------D-------TGDTPTVFRYIDW--------LLTVPLQMVEFYLILAA---C-TSVAA-SL------------FKK-LLAGSLVMLGAGFAGE---A------G--L-----------A----------------------PV------LPA-FIIGMAGWLYMIYEL-----Y--M-GE-GKAAVS--T-ASPAV-N-S-A-Y-N-AM-MMIIVV---------------------GW---AIYPAGYAAGYLM-G----------GEGVYASNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86b]_AF349980 [IV-Gamma5-SAR86b] clone_HOT_75m3_AF349980 gi|13560726|gb|AF349980| Uncultured bacterium clone HOT 75m3 proteorhodopsin gene, partial cds. Uncultured bacterium clone HOT 75m3 proteorhodopsin gene, partial cds. AF349980 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 11-MAY-2004 #na #na Pacific Ocean marine 22.4 -158 Proteorhodopsin phototrophy in the ocean Beja,O., Spudich,E.N., Spudich,J.L., Leclerc,M. and DeLong,E.F. Nature 411 (6839), 786-789 (2001) 11459054 #na ACCATGGGTAAATTATTACTGATATTAGGTAGTGCTATTGCACTTCCATCATTTGCTGCTGCTGGTGGCGATCTAGATATAAGTGATACTGTTGGTGTTTCATTCTGGCTGGTTACAGCTGGTATGTTAGCGGCAACTGTATTCTTTTTTGTAGAAAGAGACCAAGTCAGCGCTAAGTGGAAAACTTCACTTACTGTATCTGGTTTAATTACTGGTATAGCTTTTTGGCATTATCTCTACATGAGAGGTGTTTGGATAGATACTGGTGATACACCAACAGTATTTAGATATATTGATTGGTTATTAACTGTTCCATTACAAATGGTTGAGTTCTATCTAATTCTTGCTGCTTGTACAAGTGTTGCTGCTTCATTATTTAAGAAGCTTCTAGCTGGTTCATTAGTAATGTTAGGTGCTGGATTTGCAGGCGAAGCTGGTTTAGCTCCTGTATTACCTGCTTTCATTATTGGTATGGCTGGATGGTTATACATGATTTATGAGCTACATATGGGTGAAGGTAAGGCTGCTGTAAGTACTGCAAGTCCTGCTGTTAACTCTGCATACAACGCAATGATGAAGATTATTGTTATTGGATGGGCAATTTATCCTGCTGGATATGCTGCTGGTTACCTAATGAGTGGTGACGGTGTATACGCTTCAAACTTAAACCTTATATATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTGATCATTTGGAATGTTGCTGTTAAAGAATCTTCTAATGCTA TMGKLLLILGSAIALPSFAAAGGDLDISDTVGVSFWLVTAGMLAATVFFFVERDQVSAKWKTSLTVSGLITGIAFWHYLYMRGVWIDTGDTPTVFRYIDWLLTVPLQMVEFYLILAACTSVAASLFKKLLAGSLVMLGAGFAGEAGLAPVLPAFIIGMAGWLYMIYELHMGEGKAAVSTASPAVNSAYNAMMKIIVIGWAIYPAGYAAGYLMSGDGVYASNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCATGGGTAAATTATTACTGATATTAGGTAGTGCTATTGCACTTCCATCATTTGCTGCT------GCTGGTGGCGATCTAGATATAAGTGATACTGTTGGTGTTTCATTCTGGCTGGTTACAGCTGGTATGTTAGCGGCAACTGTATTCTTTTTTGTAGAAAGAGACCAAGTCAGCGCT---AAGTGGAAAACTTCACTTACTGTATCTGGTTTAATTACTGGTATAGCTTTTTGGCATTATCTCTACATGAGAGGTGTTTGGATA------------------------------GAT---------------------ACTGGTGATACACCAACAGTATTTAGATATATTGATTGG------------------------TTATTAACTGTTCCATTACAAATGGTTGAGTTCTATCTAATTCTTGCTGCT---------TGT---ACAAGTGTTGCTGCT---TCATTA------------------------------------TTTAAGAAG---CTTCTAGCTGGTTCATTAGTAATGTTAGGTGCTGGATTTGCAGGCGAA---------GCT------------------GGT------TTA---------------------------------GCT------------------------------------------------------------------CCTGTA------------------TTACCTGCT---TTCATTATTGGTATGGCTGGATGGTTATACATGATTTATGAGCTA---------------CAT------ATG---GGTGAA---GGTAAGGCTGCTGTAAGT------ACT---GCAAGTCCTGCTGTT---AAC---TCT---GCA---TAC---AAC---GCAATG---ATGAAGATTATTGTTATT---------------------------------------------------------------GGATGG---------GCAATTTATCCTGCTGGATATGCTGCTGGTTACCTAATG---AGT------------------------------GGTGACGGTGTATACGCTTCAAACTTAAACCTTATATATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTGATCATTTGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------TMGKLLLILGSAIALPSFAA--AGGDLDISDTVGVSFWLVTAGMLAATVFFFVERDQVSA-KWKTSLTVSGLITGIAFWHYLYMRGVWI----------D-------TGDTPTVFRYIDW--------LLTVPLQMVEFYLILAA---C-TSVAA-SL------------FKK-LLAGSLVMLGAGFAGE---A------G--L-----------A----------------------PV------LPA-FIIGMAGWLYMIYEL-----H--M-GE-GKAAVS--T-ASPAV-N-S-A-Y-N-AM-MKIIVI---------------------GW---AIYPAGYAAGYLM-S----------GDGVYASNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86b]_AF350002 [IV-Gamma5-SAR86b] clone_PalE6_AF350002 gi|13560770|gb|AF350002| Uncultured bacterium clone PalE6 proteorhodopsin gene, partial cds Uncultured bacterium clone PalE6 proteorhodopsin gene, partial cds AF350002 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11MAY2004 #na #na Antarctic Ocean marine -64.4 -64 Proteorhodopsin phototrophy in the ocean Beja,O., Spudich,E.N., Spudich,J.L., Leclerc,M. and DeLong,E.F. Nature 411 (6839), 786789 (2001) 11459054 #na ACCATGGGTAAATTATTACTGATATTAGGTAGTGCTATTGCACTTCCATCATTTGCTGCTGCTGGTGGCGATCTAGATATAAGTGATACTGTTGGTGTTTCATTCTGGCTGGTTACAGCTGGTATGTTAGCGGCAACTGTATTCTTTTTTGTAGAAAGAGACCAAGTCAGCGCTAAGTGGAAAACTTCACTTACTGTATCTGGTTTAATTACTGGTATAGCTTTTTGGCATTATCTCTACATGAGAGGTGTTTGGATAGATACTGGTGATACACCAACAGTATTTAGATATATTGATTGGTTATTAACTGTTCCATTACAAATGGTTGAGTTCTATCTAATTCTTGCTGCTTGTACAAGTGTTGCTGCTTCATTATTTAAGAAGCTTCTAGCTGGTTCATTAGTAATGTTAGGTGCTGGATTTGCAGGCGAAGCTGGTTTAGCTCCTGTATTACCTGCTTTCATTATTGGTATGGCTGGATGGTTATACATGATTTATGAGCTACATATGGGTGAAGGTAAGGCTGCTGTAAGTACTGCAAGTCCTGCTGTTAACTCTGCATACAACGCAATGATGAAGATTATTGTTATTGGATGGGCAATTTATCCTGCTGGATATGCTGCTGGTTACCTAATGAGTGGTGACGGTGTATACGCTTCAAACTTAAACCTTATATATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTGATCATTTGGAATGTTGCTGTTAAAGAATCTTCTAATGCT TMGKLLLILGSAIALPSFAAAGGDLDISDTVGVSFWLVTAGMLAATVFFFVERDQVSAKWKTSLTVSGLITGIAFWHYLYMRGVWIDTGDTPTVFRYIDWLLTVPLQMVEFYLILAACTSVAASLFKKLLAGSLVMLGAGFAGEAGLAPVLPAFIIGMAGWLYMIYELHMGEGKAAVSTASPAVNSAYNAMMKIIVIGWAIYPAGYAAGYLMSGDGVYASNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCATGGGTAAATTATTACTGATATTAGGTAGTGCTATTGCACTTCCATCATTTGCTGCT------GCTGGTGGCGATCTAGATATAAGTGATACTGTTGGTGTTTCATTCTGGCTGGTTACAGCTGGTATGTTAGCGGCAACTGTATTCTTTTTTGTAGAAAGAGACCAAGTCAGCGCT---AAGTGGAAAACTTCACTTACTGTATCTGGTTTAATTACTGGTATAGCTTTTTGGCATTATCTCTACATGAGAGGTGTTTGGATA------------------------------GAT---------------------ACTGGTGATACACCAACAGTATTTAGATATATTGATTGG------------------------TTATTAACTGTTCCATTACAAATGGTTGAGTTCTATCTAATTCTTGCTGCT---------TGT---ACAAGTGTTGCTGCT---TCATTA------------------------------------TTTAAGAAG---CTTCTAGCTGGTTCATTAGTAATGTTAGGTGCTGGATTTGCAGGCGAA---------GCT------------------GGT------TTA---------------------------------GCT------------------------------------------------------------------CCTGTA------------------TTACCTGCT---TTCATTATTGGTATGGCTGGATGGTTATACATGATTTATGAGCTA---------------CAT------ATG---GGTGAA---GGTAAGGCTGCTGTAAGT------ACT---GCAAGTCCTGCTGTT---AAC---TCT---GCA---TAC---AAC---GCAATG---ATGAAGATTATTGTTATT---------------------------------------------------------------GGATGG---------GCAATTTATCCTGCTGGATATGCTGCTGGTTACCTAATG---AGT------------------------------GGTGACGGTGTATACGCTTCAAACTTAAACCTTATATATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTGATCATTTGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------TMGKLLLILGSAIALPSFAA--AGGDLDISDTVGVSFWLVTAGMLAATVFFFVERDQVSA-KWKTSLTVSGLITGIAFWHYLYMRGVWI----------D-------TGDTPTVFRYIDW--------LLTVPLQMVEFYLILAA---C-TSVAA-SL------------FKK-LLAGSLVMLGAGFAGE---A------G--L-----------A----------------------PV------LPA-FIIGMAGWLYMIYEL-----H--M-GE-GKAAVS--T-ASPAV-N-S-A-Y-N-AM-MKIIVI---------------------GW---AIYPAGYAAGYLM-S----------GDGVYASNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86b]_AF349995 [IV-Gamma5-SAR86b] clone_PalB1_AF349995 gi|13560756|gb|AF349995| Uncultured bacterium clone PalB1 proteorhodopsin gene, partial cds. Uncultured bacterium clone PalB1 proteorhodopsin gene, partial cds. AF349995 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 11-MAY-2004 #na #na Antarctic Ocean marine -64.4 -64 Proteorhodopsin phototrophy in the ocean Beja,O., Spudich,E.N., Spudich,J.L., Leclerc,M. and DeLong,E.F. Nature 411 (6839), 786-789 (2001) 11459054 #na ACCATGGGTAAATTATTACTGATATTAGGTAGTGCTATTGCACTTCCATCATTTGCTGCTGCTGGTGGCGATCTAGATATAAGTGATACTGTTGGTGTTTCATTCTGGCTGGTTACAGCTGGTATGTTAGCGGCAACTGTATTCTTTTTTGTAGAAAGAGACCAAGTCAGCGCTAAGTGGAAAACTTCACTTACTGTATCTGGTTTAATTACTGGTATAGCTTTTTGGCATTATCTCTACATGAGAGGTGTTTGGATAGATACTGGTGATACACCAACAGTATTTAGATATATTGATTGGCTATTAACTGTTCCATTACAAATGGTTGAGTTCTATCTAATTCTTGCTGCTTGTACAAGTGTTGCTGCTTCATTATTTAAGAAGCTTCTAGCTGGTTCATTAGTAATGTTAGGTGCTGGATTTGCAGGCGAAGCTGGTTTAGCTCCTGTATTACCTGCTTTCATTCTTGGTATGGCTGGTTGGTTATACATGATTTATGAGCTACATATGGGTGAAGGTAAGGCTGCTGTAAGTACTGCAAGTCCTGCTGTTAACTCTGCTTACAATGCAATGATGAAGATTATTGTTATTGGATGGGCAATTTATCCTGCTGGATATGCTGCTGGTTACCTAATGAGTGGTGACGGTGTATACGCTTCAAACTTAAACCTTATATATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTGATCATTTGGAATGTTGCTGTTAAAGAATCTTCTAATGCT TMGKLLLILGSAIALPSFAAAGGDLDISDTVGVSFWLVTAGMLAATVFFFVERDQVSAKWKTSLTVSGLITGIAFWHYLYMRGVWIDTGDTPTVFRYIDWLLTVPLQMVEFYLILAACTSVAASLFKKLLAGSLVMLGAGFAGEAGLAPVLPAFILGMAGWLYMIYELHMGEGKAAVSTASPAVNSAYNAMMKIIVIGWAIYPAGYAAGYLMSGDGVYASNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCATGGGTAAATTATTACTGATATTAGGTAGTGCTATTGCACTTCCATCATTTGCTGCT------GCTGGTGGCGATCTAGATATAAGTGATACTGTTGGTGTTTCATTCTGGCTGGTTACAGCTGGTATGTTAGCGGCAACTGTATTCTTTTTTGTAGAAAGAGACCAAGTCAGCGCT---AAGTGGAAAACTTCACTTACTGTATCTGGTTTAATTACTGGTATAGCTTTTTGGCATTATCTCTACATGAGAGGTGTTTGGATA------------------------------GAT---------------------ACTGGTGATACACCAACAGTATTTAGATATATTGATTGG------------------------CTATTAACTGTTCCATTACAAATGGTTGAGTTCTATCTAATTCTTGCTGCT---------TGT---ACAAGTGTTGCTGCT---TCATTA------------------------------------TTTAAGAAG---CTTCTAGCTGGTTCATTAGTAATGTTAGGTGCTGGATTTGCAGGCGAA---------GCT------------------GGT------TTA---------------------------------GCT------------------------------------------------------------------CCTGTA------------------TTACCTGCT---TTCATTCTTGGTATGGCTGGTTGGTTATACATGATTTATGAGCTA---------------CAT------ATG---GGTGAA---GGTAAGGCTGCTGTAAGT------ACT---GCAAGTCCTGCTGTT---AAC---TCT---GCT---TAC---AAT---GCAATG---ATGAAGATTATTGTTATT---------------------------------------------------------------GGATGG---------GCAATTTATCCTGCTGGATATGCTGCTGGTTACCTAATG---AGT------------------------------GGTGACGGTGTATACGCTTCAAACTTAAACCTTATATATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTGATCATTTGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------TMGKLLLILGSAIALPSFAA--AGGDLDISDTVGVSFWLVTAGMLAATVFFFVERDQVSA-KWKTSLTVSGLITGIAFWHYLYMRGVWI----------D-------TGDTPTVFRYIDW--------LLTVPLQMVEFYLILAA---C-TSVAA-SL------------FKK-LLAGSLVMLGAGFAGE---A------G--L-----------A----------------------PV------LPA-FILGMAGWLYMIYEL-----H--M-GE-GKAAVS--T-ASPAV-N-S-A-Y-N-AM-MKIIVI---------------------GW---AIYPAGYAAGYLM-S----------GDGVYASNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86b]_AF349999 [IV-Gamma5-SAR86b] clone_PalB7_AF349999 gi|13560764|gb|AF349999| Uncultured bacterium clone PalB7 proteorhodopsin gene, partial cds Uncultured bacterium clone PalB7 proteorhodopsin gene, partial cds AF349999 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11MAY2004 #na #na Antarctic Ocean marine -64.4 -64 Proteorhodopsin phototrophy in the ocean Beja,O., Spudich,E.N., Spudich,J.L., Leclerc,M. and DeLong,E.F. Nature 411 (6839), 786789 (2001) 11459054 #na ACCATGGGTAAATTATTACTGATATTAGGTAGTGCTATTGCGCTTCCATCATTTGCTGCTGCTGGTGGCGATCTAGATATAAGTGATACTGTTGGTGTTTCATTCTGGCTGGTTACGGCTGGTATGTTAGCGGCAACTGTATTCTTTTTTGTAGAAAGAGACCAAGTCAGCGCTAAGTGGAAAACTTCACTTACTGTATCTGGTTTAATTACTGGTATAGCTTTTTGGCATTATCTCTACATGAGAGGTGTTTGGATAGATACTGGTGATACACCAACAGTATTTAGATATATTGATTGGTTATTAACTGTTCCATTACAAATGGTTGAGTTCTATCTAATTCTTGCCGCTTGTACAAGTGTTGCTGCTTCATTATTTAAGAAGCTTCTAGCTGGTTCATTGGTAATGTTAGGTGCTGGATCTGCAGGCGAAGCTGGATTAGCTCCTGTATTACCTGCTTTCATTATTGGTATGGCTGGATGGTTATACATGATTTATGAGCTATATATGGGTGAAGGTAAGGCTGCTGTAAGTACTGCAAGTCCTGCTGTTAACTCTGCATACAACGCAATGATGATGATTATTGTTGTTGGATGGGCAATTTATCCTGCTGGATATGCTGCTGGTTACCTAATGGGTGGCGAAGGTGTATACGCTTCAAACTTAAACCTCATATATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTGATCATTTGGAATGTTGCTGTTAAAGAATCTTCTAATGCT TMGKLLLILGSAIALPSFAAAGGDLDISDTVGVSFWLVTAGMLAATVFFFVERDQVSAKWKTSLTVSGLITGIAFWHYLYMRGVWIDTGDTPTVFRYIDWLLTVPLQMVEFYLILAACTSVAASLFKKLLAGSLVMLGAGSAGEAGLAPVLPAFIIGMAGWLYMIYELYMGEGKAAVSTASPAVNSAYNAMMMIIVVGWAIYPAGYAAGYLMGGEGVYASNLNLIYNLADFVNKILFGLIIWNVAVKESSNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCATGGGTAAATTATTACTGATATTAGGTAGTGCTATTGCGCTTCCATCATTTGCTGCT------GCTGGTGGCGATCTAGATATAAGTGATACTGTTGGTGTTTCATTCTGGCTGGTTACGGCTGGTATGTTAGCGGCAACTGTATTCTTTTTTGTAGAAAGAGACCAAGTCAGCGCT---AAGTGGAAAACTTCACTTACTGTATCTGGTTTAATTACTGGTATAGCTTTTTGGCATTATCTCTACATGAGAGGTGTTTGGATA------------------------------GAT---------------------ACTGGTGATACACCAACAGTATTTAGATATATTGATTGG------------------------TTATTAACTGTTCCATTACAAATGGTTGAGTTCTATCTAATTCTTGCCGCT---------TGT---ACAAGTGTTGCTGCT---TCATTA------------------------------------TTTAAGAAG---CTTCTAGCTGGTTCATTGGTAATGTTAGGTGCTGGATCTGCAGGCGAA---------GCT------------------GGA------TTA---------------------------------GCT------------------------------------------------------------------CCTGTA------------------TTACCTGCT---TTCATTATTGGTATGGCTGGATGGTTATACATGATTTATGAGCTA---------------TAT------ATG---GGTGAA---GGTAAGGCTGCTGTAAGT------ACT---GCAAGTCCTGCTGTT---AAC---TCT---GCA---TAC---AAC---GCAATG---ATGATGATTATTGTTGTT---------------------------------------------------------------GGATGG---------GCAATTTATCCTGCTGGATATGCTGCTGGTTACCTAATG---GGT------------------------------GGCGAAGGTGTATACGCTTCAAACTTAAACCTCATATATAACCTTGCTGACTTTGTTAACAAGATTCTATTTGGTTTGATCATTTGGAATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------TMGKLLLILGSAIALPSFAA--AGGDLDISDTVGVSFWLVTAGMLAATVFFFVERDQVSA-KWKTSLTVSGLITGIAFWHYLYMRGVWI----------D-------TGDTPTVFRYIDW--------LLTVPLQMVEFYLILAA---C-TSVAA-SL------------FKK-LLAGSLVMLGAGSAGE---A------G--L-----------A----------------------PV------LPA-FIIGMAGWLYMIYEL-----Y--M-GE-GKAAVS--T-ASPAV-N-S-A-Y-N-AM-MMIIVV---------------------GW---AIYPAGYAAGYLM-G----------GEGVYASNLNLIYNLADFVNKILFGLIIWNVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86b]_1112727661463 [IV-Gamma5-SAR86b] JCVI_ORF_1112727661463_GS148_Fringing_Reef_1m jcvi|1112727661463| 1112727661463 JCVI ORF 1112727661463 1112727661463 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 11-sept-05 Fringing_Reef/1m_depth/S_n.a/GS148/East_coast_Zanzibar_[Tanzania)/offshore_Paje_lagoon/Indian_Ocean Indian Ocean marine -6.3166666 39.009167 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TACTCTAAATTAAAGGAGTTTAATATGAAATATTTATTAATCTTGGGTAGTGTTATTGCGCTTCCTTCTTTTGCTGCTGGTGGTGGAGACTTAGATATAAGTGACGGTGTTGGAATTTCATTCTGGCTTGTTACTGCTGCTATGTTAGCTGCTACAGTTTTCTTTTTTGTAGAAAGAGATCAAGTAAGTGCAAAGTGGAAAACTTCATTAACAGTATCAGGTTTAATAACCGGTATTGCCTTTTGGCATTATCTATATATGAGAGGAGTATGGGTAGAAACAGGTGATTCACCTACAGTGTTTAGATACATTGATTGGTTGTTAACTGTTCCATTGCAAATGGTTGAGTTCTATCTCATTTTAGCAGCATGTACTAACGTTGCTGGCTCTCTATTTAAGAAACTACTATTCGGTTCATTAGTAATGTTAGTCGGCGGTTTTCTTGGTGAAGCTGGCATGATTGACGTAACTCTTGCATTTGTAATAGGTATGGCTGGATGGCTATATATGATTTATGAATTATATATGGGCGAAGGTAAGGCTGCTGTTAGCACTGCAAGTCCAGCTGTAAACTCTGCATATAATGCAATGATGCTTATTATTGTTGTTGGATGGTCTATCTATCCTGCTGGGTATGTTGCTGGTTACCTAATGGGTGGTGAAGGTGTATATGCTCAAAACCTAAACTTAATTTATAATCTTGCTGACTTTATTAACAAGATTCTATTCGGTTTAATCATATGGCATGTTGCTGTAAAAGAGTCTCGAGCA YSKLKEFNMKYLLILGSVIALPSFAAGGGDLDISDGVGISFWLVTAAMLAATVFFFVERDQVSAKWKTSLTVSGLITGIAFWHYLYMRGVWVETGDSPTVFRYIDWLLTVPLQMVEFYLILAACTNVAGSLFKKLLFGSLVMLVGGFLGEAGMIDVTLAFVIGMAGWLYMIYELYMGEGKAAVSTASPAVNSAYNAMMLIIVVGWSIYPAGYVAGYLMGGEGVYAQNLNLIYNLADFINKILFGLIIWHVAVKESRA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACTCTAAATTAAAGGAGTTTAATATGAAATATTTATTAATCTTGGGTAGTGTTATTGCGCTTCCTTCTTTTGCTGCT------GGTGGTGGAGACTTAGATATAAGTGACGGTGTTGGAATTTCATTCTGGCTTGTTACTGCTGCTATGTTAGCTGCTACAGTTTTCTTTTTTGTAGAAAGAGATCAAGTAAGTGCA---AAGTGGAAAACTTCATTAACAGTATCAGGTTTAATAACCGGTATTGCCTTTTGGCATTATCTATATATGAGAGGAGTATGGGTA------------------------------GAA---------------------ACAGGTGATTCACCTACAGTGTTTAGATACATTGATTGG------------------------TTGTTAACTGTTCCATTGCAAATGGTTGAGTTCTATCTCATTTTAGCAGCA---------TGT---ACTAACGTTGCTGGC---TCTCTA------------------------------------TTTAAGAAA---CTACTATTCGGTTCATTAGTAATGTTAGTCGGCGGTTTTCTTGGTGAA---------GCT------------------GGC------ATG---------------------------------ATT------------------------------------------------------------------GACGTA------------------ACTCTTGCA---TTTGTAATAGGTATGGCTGGATGGCTATATATGATTTATGAATTA---------------TAT------ATG---GGCGAA---GGTAAGGCTGCTGTTAGC------ACT---GCAAGTCCAGCTGTA---AAC---TCT---GCA---TAT---AAT---GCAATG---ATGCTTATTATTGTTGTT---------------------------------------------------------------GGATGG---------TCTATCTATCCTGCTGGGTATGTTGCTGGTTACCTAATG---GGT------------------------------GGTGAAGGTGTATATGCTCAAAACCTAAACTTAATTTATAATCTTGCTGACTTTATTAACAAGATTCTATTCGGTTTAATCATATGGCATGTTGCTGTAAAAGAG---TCTCGAGCA------------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------YSKLKEFNMKYLLILGSVIALPSFAA--GGGDLDISDGVGISFWLVTAAMLAATVFFFVERDQVSA-KWKTSLTVSGLITGIAFWHYLYMRGVWV----------E-------TGDSPTVFRYIDW--------LLTVPLQMVEFYLILAA---C-TNVAG-SL------------FKK-LLFGSLVMLVGGFLGE---A------G--M-----------I----------------------DV------TLA-FVIGMAGWLYMIYEL-----Y--M-GE-GKAAVS--T-ASPAV-N-S-A-Y-N-AM-MLIIVV---------------------GW---SIYPAGYVAGYLM-G----------GEGVYAQNLNLIYNLADFINKILFGLIIWHVAVKE-SRA-------------------------------------- [IV-Gamma5-SAR86b]_AY250729 [IV-Gamma5-SAR86b] clone_medA17_R8_6_partial_AY250729 gi|29470255|gb|AY250729| Uncultured bacterium clone medA17 R8 6 proteorhodopsin gene, partial cds Uncultured bacterium clone medA17 R8 6 proteorhodopsin gene, partial cds AY250729 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 20-Apr-2004 #na collected_from_a_depth_of_50_m_at_a_station_in_the_Alboran_Sea_[30_N/4.25_W]_in_May_1998 Mediterranean Sea marine 36 -4.25 Novel Proteorhodopsin variants from the Mediterranean and Red Seas Sabehi,G., Massana,R., Bielawski,J.P., Rosenberg,M., Delong,E.F. and Beja,O. Environ. Microbiol. 5 (10), 842849 (2003) 14510837 PCR amplified from plankton DNA extracts ATGGGTAAATTATTAATGATATTAGGTGGTGTTATTGCACTTCCTTCTTTTGCTGCTGGTGGTGGTGATCTAGATATAGGAGACTCTGTTGGAGTTTCATTCTGGCTTGTTACTGCTGCTATGTTAGCTGCTACTGTTTTCTTTTTTGTTGAAAGAGACCAAGTAAGCGCAAAATGGAAAACATCATTAACAGTATCAGGTTTAATAACAGGTATTGCTTTCTGGCACTACTTGTATATGAGAGGGGTTTGGGTAGAAACAGGCGATTCACCAACTGTATTTAGATATATAGATTGGCTTTTAACTGTACCACTACAAATGGTAGAGTTTTATCTGATATTAGCTGCATGTACCAATGTTGCTGGATCTTTATTTAAAAAGCTACTAATCGGTTCATTGGTGATGTTGATAGGAGGTTTCCTAGGTGAAGCTGGTATGATAGATGTAACACTAGCTTTTGTAATTGGAATGGCTGGATGGCTATATATGATCTATGAGCTATACATGGGTGAAGGTAAAGCTGCGGTGAGTACTGCTAGTCCTGCCGTAAATTCTGCTTACAATGCAATGATGCTTATTATTGTTGTTGGTTGGTCAATCTATCCTGCTGGATATGTTGCTGGCTATCTTATGGGCGGTGAAGGAGTATATGCCTCAAATCTAAACTTAATATATAACCTTGCTGATTTTATCAACAAGATTCTATTTGGTTTAATTATATGGCATGTTGCTGTTAAAGAATCTTCTAATGCT MGKLLMILGGVIALPSFAAGGGDLDIGDSVGVSFWLVTAAMLAATVFFFVERDQVSAKWKTSLTVSGLITGIAFWHYLYMRGVWVETGDSPTVFRYIDWLLTVPLQMVEFYLILAACTNVAGSLFKKLLIGSLVMLIGGFLGEAGMIDVTLAFVIGMAGWLYMIYELYMGEGKAAVSTASPAVNSAYNAMMLIIVVGWSIYPAGYVAGYLMGGEGVYASNLNLIYNLADFINKILFGLIIWHVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAATTATTAATGATATTAGGTGGTGTTATTGCACTTCCTTCTTTTGCTGCT------GGTGGTGGTGATCTAGATATAGGAGACTCTGTTGGAGTTTCATTCTGGCTTGTTACTGCTGCTATGTTAGCTGCTACTGTTTTCTTTTTTGTTGAAAGAGACCAAGTAAGCGCA---AAATGGAAAACATCATTAACAGTATCAGGTTTAATAACAGGTATTGCTTTCTGGCACTACTTGTATATGAGAGGGGTTTGGGTA------------------------------GAA---------------------ACAGGCGATTCACCAACTGTATTTAGATATATAGATTGG------------------------CTTTTAACTGTACCACTACAAATGGTAGAGTTTTATCTGATATTAGCTGCA---------TGT---ACCAATGTTGCTGGA---TCTTTA------------------------------------TTTAAAAAG---CTACTAATCGGTTCATTGGTGATGTTGATAGGAGGTTTCCTAGGTGAA---------GCT------------------GGT------ATG---------------------------------ATA------------------------------------------------------------------GATGTA------------------ACACTAGCT---TTTGTAATTGGAATGGCTGGATGGCTATATATGATCTATGAGCTA---------------TAC------ATG---GGTGAA---GGTAAAGCTGCGGTGAGT------ACT---GCTAGTCCTGCCGTA---AAT---TCT---GCT---TAC---AAT---GCAATG---ATGCTTATTATTGTTGTT---------------------------------------------------------------GGTTGG---------TCAATCTATCCTGCTGGATATGTTGCTGGCTATCTTATG---GGC------------------------------GGTGAAGGAGTATATGCCTCAAATCTAAACTTAATATATAACCTTGCTGATTTTATCAACAAGATTCTATTTGGTTTAATTATATGGCATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MGKLLMILGGVIALPSFAA--GGGDLDIGDSVGVSFWLVTAAMLAATVFFFVERDQVSA-KWKTSLTVSGLITGIAFWHYLYMRGVWV----------E-------TGDSPTVFRYIDW--------LLTVPLQMVEFYLILAA---C-TNVAG-SL------------FKK-LLIGSLVMLIGGFLGE---A------G--M-----------I----------------------DV------TLA-FVIGMAGWLYMIYEL-----Y--M-GE-GKAAVS--T-ASPAV-N-S-A-Y-N-AM-MLIIVV---------------------GW---SIYPAGYVAGYLM-G----------GEGVYASNLNLIYNLADFINKILFGLIIWHVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86b]_EU079188 [IV-Gamma5-SAR86b] NASB_18_env_samples_EU079188 gi|156106536|gb|EU079188| Uncultured organism clone NASB 18 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 18 putative proteorhodopsin gene, partial cds EU079188 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGGTATGTCGATTGGTTATTAACAGTTCCATTACAAATGATTGAATTCTATTTAATCCTAGCAGCATGTACTGCTGTCGCAGGTTCATTATTTAGAAAACTATTATTTGGTTCTTTGGTTATGTTAATTGGTGGTTTCTTAGGTGAAGCAGGTGTGATGGCAGTATGGCCAGCGTTTATTATCGGAATGGCAGGATGGCTATATATGATATATGAGCTTTACTTAGGTGAAGGAAAATCTGCGGTTTCAACAGCTAGCGTAGCTGTTAATTCTGCTTATAAAGCTATGATGGCAATTATCGTATTTGGGTGGGCCATATAT RYVDWLLTVPLQMIEFYLILAACTAVAGSLFRKLLFGSLVMLIGGFLGEAGVMAVWPAFIIGMAGWLYMIYELYLGEGKSAVSTASVAVNSAYKAMMAIIVFGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTATGTCGATTGG------------------------TTATTAACAGTTCCATTACAAATGATTGAATTCTATTTAATCCTAGCAGCA---------TGT---ACTGCTGTCGCAGGT---TCATTA------------------------------------TTTAGAAAA---CTATTATTTGGTTCTTTGGTTATGTTAATTGGTGGTTTCTTAGGTGAA---------GCA------------------GGT------GTG---------------------------------ATG------------------------------------------------------------------GCAGTA------------------TGGCCAGCG---TTTATTATCGGAATGGCAGGATGGCTATATATGATATATGAGCTT---------------TAC------TTA---GGTGAA---GGAAAATCTGCGGTTTCA------ACA---GCTAGCGTAGCTGTT---AAT---TCT---GCT---TAT---AAA---GCTATG---ATGGCAATTATCGTATTT---------------------------------------------------------------GGGTGG---------GCCATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLQMIEFYLILAA---C-TAVAG-SL------------FRK-LLFGSLVMLIGGFLGE---A------G--V-----------M----------------------AV------WPA-FIIGMAGWLYMIYEL-----Y--L-GE-GKSAVS--T-ASVAV-N-S-A-Y-K-AM-MAIIVF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86b]_AY250728 [IV-Gamma5-SAR86b] Uncultured_bacterium_clone_medA19_R8_19_partial_cds_AY250728 gi|29470253|gb|AY250728| Uncultured bacterium clone medA19 R8 19 proteorhodopsin gene, partial cds Uncultured bacterium clone medA19 R8 19 proteorhodopsin gene, partial cds AY250728 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 20-Apr-2004 #na collected_from_a_depth_of_100_m_at_a_station_in_the_Alboran_Sea_[30_N/4.25_W]_in_May_1998 Mediterranean Sea marine 36 -4.25 Novel Proteorhodopsin variants from the Mediterranean and Red Seas Sabehi,G., Massana,R., Bielawski,J.P., Rosenberg,M., Delong,E.F. and Beja,O. Environ. Microbiol. 5 (10), 842849 (2003) 14510837 PCR amplified from plankton DNA extracts ATGGGTAAATTATTAATGATCTTAGGTGGTGTTATTGCACTTCCTTCTTTTGCTGCTGGTGGTGGTGATCTAGATATAGGAGACTCTGTTGGAGTTTCATTCTGGCTTGTTACTGCTGCTATGTTAGCTGCTACTGTTTTCTTTTTTGTTGAAAGAGACCAAGTAAGCGCAAAGTGGAAAACATCATTAACAGTATCAGGTTTAATTACTGGTATTGCTTTTTGGCATTATCTTTACATGAGAGGTGTATGGATAGATACAGGTGGAAGCCCAACAGTATTTAGATATATTGATTGGTTGCTAACTGTTCCATTACAAATGGTTGAGTTTTATTTAATTCTTGCAGCTTGTACTAATGTAGCTGGTTCATTATTTAAGAAACTGCTTGTTGGTTCATTAGTAATGTTAGGTGCTGGATTTGCTGGTGAAGCTGGATTAGCTCCTGCATTGCCTGCTTTCATACTTGGTATGGCTGGATGGGTATACATGATATATGAGCTGTATATGGGTGAAGGTAAAGCTGCGGTGAGTACTGCTAGTCCTGCCGTAAATTCTGCTTACAATGCAATGATGATGATTATAGTTTTTGGTTGGTCTATTTATCCACTGGGATATGTTGCTGGCTATTTAATGGGTGCAGTAGATCCAAGTACATTAAATCTAATATACAACCTTGCTGATTTTATTAATAAGATTTTATTCGGTTTAATAATCTGGCATGTTGCTGTTAAAGAATCTTCTAATGCT MGKLLMILGGVIALPSFAAGGGDLDIGDSVGVSFWLVTAAMLAATVFFFVERDQVSAKWKTSLTVSGLITGIAFWHYLYMRGVWIDTGGSPTVFRYIDWLLTVPLQMVEFYLILAACTNVAGSLFKKLLVGSLVMLGAGFAGEAGLAPALPAFILGMAGWVYMIYELYMGEGKAAVSTASPAVNSAYNAMMMIIVFGWSIYPLGYVAGYLMGAVDPSTLNLIYNLADFINKILFGLIIWHVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAATTATTAATGATCTTAGGTGGTGTTATTGCACTTCCTTCTTTTGCTGCT------GGTGGTGGTGATCTAGATATAGGAGACTCTGTTGGAGTTTCATTCTGGCTTGTTACTGCTGCTATGTTAGCTGCTACTGTTTTCTTTTTTGTTGAAAGAGACCAAGTAAGCGCA---AAGTGGAAAACATCATTAACAGTATCAGGTTTAATTACTGGTATTGCTTTTTGGCATTATCTTTACATGAGAGGTGTATGGATA------------------------------GAT---------------------ACAGGTGGAAGCCCAACAGTATTTAGATATATTGATTGG------------------------TTGCTAACTGTTCCATTACAAATGGTTGAGTTTTATTTAATTCTTGCAGCT---------TGT---ACTAATGTAGCTGGT---TCATTA------------------------------------TTTAAGAAA---CTGCTTGTTGGTTCATTAGTAATGTTAGGTGCTGGATTTGCTGGTGAA---------GCT------------------GGA------TTA---------------------------------GCT------------------------------------------------------------------CCTGCA------------------TTGCCTGCT---TTCATACTTGGTATGGCTGGATGGGTATACATGATATATGAGCTG---------------TAT------ATG---GGTGAA---GGTAAAGCTGCGGTGAGT------ACT---GCTAGTCCTGCCGTA---AAT---TCT---GCT---TAC---AAT---GCAATG---ATGATGATTATAGTTTTT---------------------------------------------------------------GGTTGG---------TCTATTTATCCACTGGGATATGTTGCTGGCTATTTAATG---GGT------------------------------------GCAGTAGATCCAAGTACATTAAATCTAATATACAACCTTGCTGATTTTATTAATAAGATTTTATTCGGTTTAATAATCTGGCATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MGKLLMILGGVIALPSFAA--GGGDLDIGDSVGVSFWLVTAAMLAATVFFFVERDQVSA-KWKTSLTVSGLITGIAFWHYLYMRGVWI----------D-------TGGSPTVFRYIDW--------LLTVPLQMVEFYLILAA---C-TNVAG-SL------------FKK-LLVGSLVMLGAGFAGE---A------G--L-----------A----------------------PA------LPA-FILGMAGWVYMIYEL-----Y--M-GE-GKAAVS--T-ASPAV-N-S-A-Y-N-AM-MMIIVF---------------------GW---SIYPLGYVAGYLM-G------------AVDPSTLNLIYNLADFINKILFGLIIWHVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86b]_AY250727 [IV-Gamma5-SAR86b] clone_medA19_R8_16_partial_AY250727 gi|29470251|gb|AY250727| Uncultured bacterium clone medA19 R8 16 proteorhodopsin gene, partial cds Uncultured bacterium clone medA19 R8 16 proteorhodopsin gene, partial cds AY250727 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 20-Apr-2004 #na collected_from_a_depth_of_100_m_at_a_station_in_the_Alboran_Sea_[30_N/4.25_W]_in_May_1998 Mediterranean Sea marine 36 -4.25 Novel Proteorhodopsin variants from the Mediterranean and Red Seas Sabehi,G., Massana,R., Bielawski,J.P., Rosenberg,M., Delong,E.F. and Beja,O. Environ. Microbiol. 5 (10), 842849 (2003) 14510837 PCR amplified from plankton DNA extracts ATGGGTAAATTATTAGTGATGTTAGGTGGTGTTATTGCACTTCCTTCTTTTGCTGCTGGTGGTGGTGATCTAGATATAGGAGACTCCGTTGGAGTTTCATTCTGGCTTGTTACTGCTGCTATGTTAGCTGCTACTGTTTTCTTTTTTGTTGAAAGAGACCAAGTAAGCGCAAAGTGGAAAACATCATTAACAGTATCAGGTTTAATTACTGGTATTGCTTTTTGGCATTATCTTTACATGAGAGGTGTATGGATAGATACAGGTGGAAGCCCAACAGTATTTAGATATATTGATTGGTTGCTAACTGTTCCATTACAAATGGTTGAGTTTTATTTAATTCTTGCAGCTTGTACTAATGTAGCTGGTTCATTATTTAAGAAACTGCTTGTTGGTTCATTAGTAATGTTAGGTGCTGGATTTGCTGGTGAAGCTGGACTAGCTCCTGCATTGCCTGCTTTCATACTTGGTATGGCTGGATGGGTATACATGATATATGAGCTGTATATGGGTGAAGGTAAAGCTGCGGTGAGTACTGCTAGTCCTGCCGTAAATTCTGCTTACAATGCAATGATGATGATTATAGTTTTTGGTTGGTCTATTTATCCACTGGGATATGTTGCTGGCTATTTAATGGGTGCAGTAGATCCAAGTACATTAAATCTAATATACAACCTTGCTGATTTTATTAATAAGATTTTATTCGGTTTAATAATCTGGCATGTTGCTGTTAAAGAATCTTCTAATGCT MGKLLVMLGGVIALPSFAAGGGDLDIGDSVGVSFWLVTAAMLAATVFFFVERDQVSAKWKTSLTVSGLITGIAFWHYLYMRGVWIDTGGSPTVFRYIDWLLTVPLQMVEFYLILAACTNVAGSLFKKLLVGSLVMLGAGFAGEAGLAPALPAFILGMAGWVYMIYELYMGEGKAAVSTASPAVNSAYNAMMMIIVFGWSIYPLGYVAGYLMGAVDPSTLNLIYNLADFINKILFGLIIWHVAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAATTATTAGTGATGTTAGGTGGTGTTATTGCACTTCCTTCTTTTGCTGCT------GGTGGTGGTGATCTAGATATAGGAGACTCCGTTGGAGTTTCATTCTGGCTTGTTACTGCTGCTATGTTAGCTGCTACTGTTTTCTTTTTTGTTGAAAGAGACCAAGTAAGCGCA---AAGTGGAAAACATCATTAACAGTATCAGGTTTAATTACTGGTATTGCTTTTTGGCATTATCTTTACATGAGAGGTGTATGGATA------------------------------GAT---------------------ACAGGTGGAAGCCCAACAGTATTTAGATATATTGATTGG------------------------TTGCTAACTGTTCCATTACAAATGGTTGAGTTTTATTTAATTCTTGCAGCT---------TGT---ACTAATGTAGCTGGT---TCATTA------------------------------------TTTAAGAAA---CTGCTTGTTGGTTCATTAGTAATGTTAGGTGCTGGATTTGCTGGTGAA---------GCT------------------GGA------CTA---------------------------------GCT------------------------------------------------------------------CCTGCA------------------TTGCCTGCT---TTCATACTTGGTATGGCTGGATGGGTATACATGATATATGAGCTG---------------TAT------ATG---GGTGAA---GGTAAAGCTGCGGTGAGT------ACT---GCTAGTCCTGCCGTA---AAT---TCT---GCT---TAC---AAT---GCAATG---ATGATGATTATAGTTTTT---------------------------------------------------------------GGTTGG---------TCTATTTATCCACTGGGATATGTTGCTGGCTATTTAATG---GGT------------------------------------GCAGTAGATCCAAGTACATTAAATCTAATATACAACCTTGCTGATTTTATTAATAAGATTTTATTCGGTTTAATAATCTGGCATGTTGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MGKLLVMLGGVIALPSFAA--GGGDLDIGDSVGVSFWLVTAAMLAATVFFFVERDQVSA-KWKTSLTVSGLITGIAFWHYLYMRGVWI----------D-------TGGSPTVFRYIDW--------LLTVPLQMVEFYLILAA---C-TNVAG-SL------------FKK-LLVGSLVMLGAGFAGE---A------G--L-----------A----------------------PA------LPA-FILGMAGWVYMIYEL-----Y--M-GE-GKAAVS--T-ASPAV-N-S-A-Y-N-AM-MMIIVF---------------------GW---SIYPLGYVAGYLM-G------------AVDPSTLNLIYNLADFINKILFGLIIWHVAVKE-SSNA------------------------------------- [IV-Gamma5-SAR86b]_KJ926147 [IV-Gamma5-SAR86b] BOUM_OTU060_env_samples gb|KJ926147| Uncultured bacterium clone BOUM OTU060 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU060 putative proteorhodopsin gene, partial cds KJ926147 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 39.0995 5.3403333 #na #na #na #na #na ATTGATTGGCTATTAACTGTTCCATTACAAATGGTTGAATTCTATTTAATATTAGCTGCATGTACTGCTGTAGCTGGTTCATTATTTAAGAAACTACTTGGTGGTTCTTTAGTAAGGTTAGGATTTGGTTTCATGGGTGAAGCTGGAATGATGCCTGTATTGCCTGCATTTATTGTTGGTGTTGCTGCTTGGTTATATATGATTTACGAGCTATATGCTGGTGAAGGAAAATCAGCAGTAATGACTGCAAGTCCTGCTGTTAATTCAGCATATAAAGCAATGATGTATATCATCGTTGTTGGATGGGCAATTTAC IDWLLTVPLQMVEFYLILAACTAVAGSLFKKLLGGSLVRLGFGFMGEAGMMPVLPAFIVGVAAWLYMIYELYAGEGKSAVMTASPAVNSAYKAMMYIIVVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGATTGG------------------------CTATTAACTGTTCCATTACAAATGGTTGAATTCTATTTAATATTAGCTGCA---------TGT---ACTGCTGTAGCTGGT---TCATTA------------------------------------TTTAAGAAA---CTACTTGGTGGTTCTTTAGTAAGGTTAGGATTTGGTTTCATGGGTGAA---------GCT------------------GGA------ATG---------------------------------ATG------------------------------------------------------------------CCTGTA------------------TTGCCTGCA---TTTATTGTTGGTGTTGCTGCTTGGTTATATATGATTTACGAGCTA---------------TAT------GCT---GGTGAA---GGAAAATCAGCAGTAATG------ACT---GCAAGTCCTGCTGTT---AAT---TCA---GCA---TAT---AAA---GCAATG---ATGTATATCATCGTTGTT---------------------------------------------------------------GGATGG---------GCAATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDW--------LLTVPLQMVEFYLILAA---C-TAVAG-SL------------FKK-LLGGSLVRLGFGFMGE---A------G--M-----------M----------------------PV------LPA-FIVGVAAWLYMIYEL-----Y--A-GE-GKSAVM--T-ASPAV-N-S-A-Y-K-AM-MYIIVV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86b]_FJ560829 [IV-Gamma5-SAR86b] HEL113_env_samples_FJ560829 gi|223868805|gb|FJ560829| Uncultured microorganism clone HEL113 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL113 putative proteorhodopsin gene, partial cds FJ560829 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTTCCGCTTCTAATAATTGAGTTCTACTTAATACTTAGAGCCGTAACAAATGTTGCAAGTTCACTTTTCACTAAGTTGCTTGTTGGTTCTTTAGTGATGCTTATTGCAGGTTACCTTGGTGAGTCAGCAGCAGTAAGCGGTGGTTCTACTACTGTAGTTTACGCAGGCTTTGGTGTGGGTATGCTTGCATGGCTCTACATGATCAGAGAGCTGCATTCTGGTGAAGGTGGGGTTGCTGTTAAACAAGCAAGTCCTGCTGTTCAGTCTGGTTATAAAGCAATGATGATG TVPLLIIEFYLILRAVTNVASSLFTKLLVGSLVMLIAGYLGESAAVSGGSTTVVYAGFGVGMLAWLYMIRELHSGEGGVAVKQASPAVQSGYKAMMM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTTCCGCTTCTAATAATTGAGTTCTACTTAATACTTAGAGCC---------GTA---ACAAATGTTGCAAGT---TCACTT------------------------------------TTCACTAAG---TTGCTTGTTGGTTCTTTAGTGATGCTTATTGCAGGTTACCTTGGTGAG---------TCA------------------GCA------GCA---------------------------------GTA------------------------------------------------------------------AGCGGTGGTTCTACTACTGTAGTTTACGCAGGC---TTTGGTGTGGGTATGCTTGCATGGCTCTACATGATCAGAGAGCTG---------------CAT------TCT---GGTGAA---GGTGGGGTTGCTGTTAAA------CAA---GCAAGTCCTGCTGTT---CAG---TCT---GGT---TAT---AAA---GCAATG---ATGATG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLIIEFYLILRA---V-TNVAS-SL------------FTK-LLVGSLVMLIAGYLGE---S------A--A-----------V----------------------SGGSTTVVYAG-FGVGMLAWLYMIREL-----H--S-GE-GGVAVK--Q-ASPAV-Q-S-G-Y-K-AM-MM------------------------------------------------------------------------------------------------------------------------------------ [IV-Gamma5-SAR86b]_1105075889976 [IV-Gamma5-SAR86b] JCVI_ORF_1105075889976_GS002_Coastal_1m jcvi|1105075889976| 1105075889976 JCVI ORF 1105075889976 1105075889976 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 21-AUG-2003 Coastal/1m_depth/S_29.2_psu/GS002/Gulf_of_Maine/North_American_East_Coast Atlantic Ocean marine 42.503056 -67.24 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGGTCAATTTTGGCTTATATATATGTGAGGAGTTATATATGAAATATTTATTAATGTTAACAGGACTTATGGCTATGCCATCATTCGCTGCGGGGGATTTAGCAGCAAATGATATGACAGGCGTATCTTTTTGGCTAGTTACAGCTGCTTTATTGGCTGCAACAGTATTCTTTTTTGTTGAAAGAGATAATGTAAGTTCTAAATGGAAAACATCTTTAACTGTATCAGGTCTTGTTACAGGTATTGCTTTTTGGCATTACATGTACATGAGAGGCGTTTGGGTAGATACTCAAACTTCACCGATTGTATACAGATATATTGATTGGTTATTAACCGTTCCACTTCTAATAATTGAGTTCTACTTAATACTTAGAGCTGTAACAAATGTTGCAAGTTCACTTTTCACTAGGTTGCTTGTTGGTTCTTTAGTGATGCTTGTTGCAGGTTACCTTGGTGAGTCAGCAGCAGTAAACGGTGGTTCTGCTACTGTAGTTTACGTAGGCTTTGGTGTAGGTATGCTTGCATGGGGCTACATGATCAGAGAGCTGTATTCTGGTGAAGGTGGAGTTGCTGTTAAACAAGCAAGTCCTGCTGTTCAGTCTGCTTATAAAGCAATGATGATGATAATTATTGTTGGTTGGGCTGTATATCCACTAGGATATGTGTTCGGTCATATGGTTGGCGATGGCAACCCTGCTTCTTTAAATCTAATTTATAATTTTGCTGACTTTGTTAACAAAATTCTATTTGGTTTAATTATATGGCATGTAGCTGTTACTGAATCACAAGGAACA MVNFGLYICEELYMKYLLMLTGLMAMPSFAAGDLAANDMTGVSFWLVTAALLAATVFFFVERDNVSSKWKTSLTVSGLVTGIAFWHYMYMRGVWVDTQTSPIVYRYIDWLLTVPLLIIEFYLILRAVTNVASSLFTRLLVGSLVMLVAGYLGESAAVNGGSATVVYVGFGVGMLAWGYMIRELYSGEGGVAVKQASPAVQSAYKAMMMIIIVGWAVYPLGYVFGHMVGDGNPASLNLIYNFADFVNKILFGLIIWHVAVTESQGT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCAATTTTGGCTTATATATATGTGAGGAGTTATATATGAAATATTTATTAATGTTAACAGGACTTATGGCTATGCCATCATTCGCTGCG------------GGGGATTTAGCAGCAAATGATATGACAGGCGTATCTTTTTGGCTAGTTACAGCTGCTTTATTGGCTGCAACAGTATTCTTTTTTGTTGAAAGAGATAATGTAAGTTCT---AAATGGAAAACATCTTTAACTGTATCAGGTCTTGTTACAGGTATTGCTTTTTGGCATTACATGTACATGAGAGGCGTTTGGGTA------------------------------GAT---------------------ACTCAAACTTCACCGATTGTATACAGATATATTGATTGG------------------------TTATTAACCGTTCCACTTCTAATAATTGAGTTCTACTTAATACTTAGAGCT---------GTA---ACAAATGTTGCAAGT---TCACTT------------------------------------TTCACTAGG---TTGCTTGTTGGTTCTTTAGTGATGCTTGTTGCAGGTTACCTTGGTGAG---------TCA------------------GCA------GCA---------------------------------GTA------------------------------------------------------------------AACGGTGGTTCTGCTACTGTAGTTTACGTAGGC---TTTGGTGTAGGTATGCTTGCATGGGGCTACATGATCAGAGAGCTG---------------TAT------TCT---GGTGAA---GGTGGAGTTGCTGTTAAA------CAA---GCAAGTCCTGCTGTT---CAG---TCT---GCT---TAT---AAA---GCAATG---ATGATGATAATTATTGTT---------------------------------------------------------------GGTTGG---------GCTGTATATCCACTAGGATATGTGTTCGGTCATATGGTT---GGC------------------------------------GATGGCAACCCTGCTTCTTTAAATCTAATTTATAATTTTGCTGACTTTGTTAACAAAATTCTATTTGGTTTAATTATATGGCATGTAGCTGTTACTGAA---TCACAAGGAACA--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------MVNFGLYICEELYMKYLLMLTGLMAMPSFAA----GDLAANDMTGVSFWLVTAALLAATVFFFVERDNVSS-KWKTSLTVSGLVTGIAFWHYMYMRGVWV----------D-------TQTSPIVYRYIDW--------LLTVPLLIIEFYLILRA---V-TNVAS-SL------------FTR-LLVGSLVMLVAGYLGE---S------A--A-----------V----------------------NGGSATVVYVG-FGVGMLAWGYMIREL-----Y--S-GE-GGVAVK--Q-ASPAV-Q-S-A-Y-K-AM-MMIIIV---------------------GW---AVYPLGYVFGHMV-G------------DGNPASLNLIYNFADFVNKILFGLIIWHVAVTE-SQGT------------------------------------- [IV-Gamma5-SAR86b]_1105090591778 [IV-Gamma5-SAR86b] JCVI_ORF_1105090591778_GS002_Coastal_1m jcvi|1105090591778| 1105090591778 JCVI ORF 1105090591778 1105090591778 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 21-AUG-2003 Coastal/1m_depth/S_29.2_psu/GS002/Gulf_of_Maine/North_American_East_Coast Atlantic Ocean marine 42.503056 -67.24 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGGTCAATTTTGGCTTATATATATGTGAGGAGTTATATATGAAATATTTATTAATGTTAACAGGACTTATGGCTATGCCATCATTCGCTGCGGGGGATTTAGCAGCAAATGATATGACAGGCGTATCTTTTTGGCTAGTTACAGCTGCTTTATTGGCTGCAACAGTATTCTTTTTTGTTGAAAGAGATAATGTAAGTTCTAAATGGAAAACATCTTTAACTGTATCAGGTCTTGTTACAGGTATTGCTTTTTGGCATTACATGTACATGAGAGGCGTTTGGGTAGATACTCAAACTTCACCGATTGTATACAGATATATTGATTGGTTATTAACCGTTCCATTGCTAATTGTTGAGTTCTATCTAATTCTTAGAGCAGTAACAAATGTAGCAAGTTCTTTATTCACTAAACTATTTGTTGGTTCGCTAGTTATGCTTATCTTCGGTTATCTTGGTGAGTCAGGAGCCATGAGTGCAGTGTTTGCATTTGTTATTGCTATGGCAGCATGGATCTATATGATTCAGGTTCTGTATTCAGGTGAAGGTGGAGTTGCTGTTAAACAAGCAAGTCCTGCGGTTCAGTCTGCATATAAAACAATGATGTGGATTATCATCGTTGGTTGGGCTGTATATCCGCTTGGATATGTAATGGGTCATTTAGTGGGTGAAACTAACCCTGCGTCATTAAACATCATTTATAATTTTGCTGACTTTGTTAACAAAATTCTATTTGGTTTGATTATATGGCATGCAGCTGTTACTGAATCAAAAGGAACA MVNFGLYICEELYMKYLLMLTGLMAMPSFAAGDLAANDMTGVSFWLVTAALLAATVFFFVERDNVSSKWKTSLTVSGLVTGIAFWHYMYMRGVWVDTQTSPIVYRYIDWLLTVPLLIVEFYLILRAVTNVASSLFTKLFVGSLVMLIFGYLGESGAMSAVFAFVIAMAAWIYMIQVLYSGEGGVAVKQASPAVQSAYKTMMWIIIVGWAVYPLGYVMGHLVGETNPASLNIIYNFADFVNKILFGLIIWHAAVTESKGT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCAATTTTGGCTTATATATATGTGAGGAGTTATATATGAAATATTTATTAATGTTAACAGGACTTATGGCTATGCCATCATTCGCTGCG------------GGGGATTTAGCAGCAAATGATATGACAGGCGTATCTTTTTGGCTAGTTACAGCTGCTTTATTGGCTGCAACAGTATTCTTTTTTGTTGAAAGAGATAATGTAAGTTCT---AAATGGAAAACATCTTTAACTGTATCAGGTCTTGTTACAGGTATTGCTTTTTGGCATTACATGTACATGAGAGGCGTTTGGGTA------------------------------GAT---------------------ACTCAAACTTCACCGATTGTATACAGATATATTGATTGG------------------------TTATTAACCGTTCCATTGCTAATTGTTGAGTTCTATCTAATTCTTAGAGCA---------GTA---ACAAATGTAGCAAGT---TCTTTA------------------------------------TTCACTAAA---CTATTTGTTGGTTCGCTAGTTATGCTTATCTTCGGTTATCTTGGTGAG---------TCA------------------GGA------GCC---------------------------------ATG------------------------------------------------------------------AGTGCA------------------GTGTTTGCA---TTTGTTATTGCTATGGCAGCATGGATCTATATGATTCAGGTTCTG---------------TAT------TCA---GGTGAA---GGTGGAGTTGCTGTTAAA------CAA---GCAAGTCCTGCGGTT---CAG---TCT---GCA---TAT---AAA---ACAATG---ATGTGGATTATCATCGTT---------------------------------------------------------------GGTTGG---------GCTGTATATCCGCTTGGATATGTAATGGGTCATTTAGTG---GGT------------------------------GAAACTAAC------CCTGCGTCATTAAACATCATTTATAATTTTGCTGACTTTGTTAACAAAATTCTATTTGGTTTGATTATATGGCATGCAGCTGTTACTGAA---TCAAAAGGAACA--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------MVNFGLYICEELYMKYLLMLTGLMAMPSFAA----GDLAANDMTGVSFWLVTAALLAATVFFFVERDNVSS-KWKTSLTVSGLVTGIAFWHYMYMRGVWV----------D-------TQTSPIVYRYIDW--------LLTVPLLIVEFYLILRA---V-TNVAS-SL------------FTK-LFVGSLVMLIFGYLGE---S------G--A-----------M----------------------SA------VFA-FVIAMAAWIYMIQVL-----Y--S-GE-GGVAVK--Q-ASPAV-Q-S-A-Y-K-TM-MWIIIV---------------------GW---AVYPLGYVMGHLV-G----------ETN--PASLNIIYNFADFVNKILFGLIIWHAAVTE-SKGT------------------------------------- [IV-Gamma5-SAR86b]_1105165797326 [IV-Gamma5-SAR86b] JCVI_ORF_1105165797326_GS030_Warm_Seep_19m jcvi|1105165797326| 1105165797326 JCVI ORF 1105165797326 1105165797326 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 09-FEB-2004 Warm_Seep/19m_depth/S_n.a/GS030/Warm_seep/Roca_Redonda/Galapagos_Islands Red Sea marine 0.27222222 -91.63333 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAATATTTATTAATGTTGACGGGGCTTATGGTTATGCCATCTTTTGCAGCGGGGGACCTAGCAGCTGATGACATGACTGGCGTTTCTTTTTGGCTAGTAACAGCTGCACTATTGGCTGCAACAGTCTTCTTCTTCGTTGAAAGAGATAACGTAAGTTCCAAATGGAAAACATCATTAACTGTATCAGGTCTTGTAACAGGTATTGCTTTCTGGCATTACATGTACATGAGAGGTGTATGGGTAGATACTCAGACATCACCTATCGTATACAGATATATTGATTGGTTATTAACCGTTCCATTGCTAATTGTTGAGTTCTATTTAATTCTTAGAGCTGTAACAAATGTAGCAAGCTCTCTCTTTACTAAGTTATTTGTTGGTTCGCTAGTTATGCTTATCTTCGGTTACCTTGGTGAGGCTGGAAATATGAATGCAATGGTTGCATTTGTTATTGCCATGTTAGCTTGGCTATATATGATTCAAGTCCTATATTCTGGTGAAGGTGGAGCTGCTGCTAAGCAAGCTAGCCCTGCTGTTCAGACGGCTTATAAAACTATGATGTGGATCATTATTGTTGGTTGGGCTGTATATCCATTAGGATATGTATTTGGTCACTTGTTAGGTGATACTAACCCTGCTTCATTGAATATCATTTACAATTTTGCTGACTTTGTTAACAAAATTCTATTTGGTTTAATCATATGGCACGCAGCTGTGACTGAATCACAAGGTACT MKYLLMLTGLMVMPSFAAGDLAADDMTGVSFWLVTAALLAATVFFFVERDNVSSKWKTSLTVSGLVTGIAFWHYMYMRGVWVDTQTSPIVYRYIDWLLTVPLLIVEFYLILRAVTNVASSLFTKLFVGSLVMLIFGYLGEAGNMNAMVAFVIAMLAWLYMIQVLYSGEGGAAAKQASPAVQTAYKTMMWIIIVGWAVYPLGYVFGHLLGDTNPASLNIIYNFADFVNKILFGLIIWHAAVTESQGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAATATTTATTAATGTTGACGGGGCTTATGGTTATGCCATCTTTTGCAGCG------------GGGGACCTAGCAGCTGATGACATGACTGGCGTTTCTTTTTGGCTAGTAACAGCTGCACTATTGGCTGCAACAGTCTTCTTCTTCGTTGAAAGAGATAACGTAAGTTCC---AAATGGAAAACATCATTAACTGTATCAGGTCTTGTAACAGGTATTGCTTTCTGGCATTACATGTACATGAGAGGTGTATGGGTA------------------------------GAT---------------------ACTCAGACATCACCTATCGTATACAGATATATTGATTGG------------------------TTATTAACCGTTCCATTGCTAATTGTTGAGTTCTATTTAATTCTTAGAGCT---------GTA---ACAAATGTAGCAAGC---TCTCTC------------------------------------TTTACTAAG---TTATTTGTTGGTTCGCTAGTTATGCTTATCTTCGGTTACCTTGGTGAG---------GCT------------------GGA------AAT---------------------------------ATG------------------------------------------------------------------AATGCA------------------ATGGTTGCA---TTTGTTATTGCCATGTTAGCTTGGCTATATATGATTCAAGTCCTA---------------TAT------TCT---GGTGAA---GGTGGAGCTGCTGCTAAG------CAA---GCTAGCCCTGCTGTT---CAG---ACG---GCT---TAT---AAA---ACTATG---ATGTGGATCATTATTGTT---------------------------------------------------------------GGTTGG---------GCTGTATATCCATTAGGATATGTATTTGGTCACTTGTTA---GGT------------------------------GATACTAAC------CCTGCTTCATTGAATATCATTTACAATTTTGCTGACTTTGTTAACAAAATTCTATTTGGTTTAATCATATGGCACGCAGCTGTGACTGAA---TCACAAGGTACT--------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------MKYLLMLTGLMVMPSFAA----GDLAADDMTGVSFWLVTAALLAATVFFFVERDNVSS-KWKTSLTVSGLVTGIAFWHYMYMRGVWV----------D-------TQTSPIVYRYIDW--------LLTVPLLIVEFYLILRA---V-TNVAS-SL------------FTK-LFVGSLVMLIFGYLGE---A------G--N-----------M----------------------NA------MVA-FVIAMLAWLYMIQVL-----Y--S-GE-GGAAAK--Q-ASPAV-Q-T-A-Y-K-TM-MWIIIV---------------------GW---AVYPLGYVFGHLL-G----------DTN--PASLNIIYNFADFVNKILFGLIIWHAAVTE-SQGT------------------------------------- [IV-Gamma5-SAR86b]_1112727352031 [IV-Gamma5-SAR86b] JCVI_ORF_1112727352031_GS148_Fringing_Reef_1m jcvi|1112727352031| 1112727352031 JCVI ORF 1112727352031 1112727352031 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 11-sept-05 Fringing_Reef/1m_depth/S_n.a/GS148/East_coast_Zanzibar_[Tanzania)/offshore_Paje_lagoon/Indian_Ocean Indian Ocean marine -6.3166666 39.009167 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ACATTTGCAGCTGGTGGTGGAGACCTTGATGCATCAGATATGACTGGAGTTAGTTTCTGGTTAGTAACTGCTGCTCTATTAGCTTCTACAGTATTCTTTTTCATTGAAAGAGATAATGTTAGTGCTAAATGGAAGACATCATTAACTGTATCTGGTTTAGTTACAGGTATTGCATTCTGGCATTATTTATATATGAGAGGAGTCTGGGTAGAAACAGGTAGTTCTCCAACAGTATTTAGATATATTGATTGGTTATTGACTGTGCCTCTACTTATCATAGAGTTCTACTTAATCCTTAGAGCTGTTACTAATGTAGCTGGACAATTATTCATGAAATTGTTTGTTGGTTCTTTAGTAATGCTTGTCTTTGGGTATTTAGGTGAGTCAGGTGGAATGAATGTAACAATTGCATTCGTTATAGCTATGGCTGCATGGATCTATATGATACAAGTATTATATTCAGGCGATGGTAAAACTGCAGTTTCTGCTGCAAGTCCAGCCGTTCAATCAGCTTACAAAACTATGATGTTAATTATCATTTTTGGTTGGGCTGTATATCCATTAGGATATGTAATGGGTTATTTAGTTGGTGGCGAAAACGTTTATGCTGCAAACTTAAACCTTATTTACAACATGGCTGACTTTGTTAATAAAATCCTATTTGGATTAATTATTTGGCATGTAGCTGTTAAAGAGTCACACGGTACT TFAAGGGDLDASDMTGVSFWLVTAALLASTVFFFIERDNVSAKWKTSLTVSGLVTGIAFWHYLYMRGVWVETGSSPTVFRYIDWLLTVPLLIIEFYLILRAVTNVAGQLFMKLFVGSLVMLVFGYLGESGGMNVTIAFVIAMAAWIYMIQVLYSGDGKTAVSAASPAVQSAYKTMMLIIIFGWAVYPLGYVMGYLVGGENVYAANLNLIYNMADFVNKILFGLIIWHVAVKESHGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATTTGCAGCT------GGTGGTGGAGACCTTGATGCATCAGATATGACTGGAGTTAGTTTCTGGTTAGTAACTGCTGCTCTATTAGCTTCTACAGTATTCTTTTTCATTGAAAGAGATAATGTTAGTGCT---AAATGGAAGACATCATTAACTGTATCTGGTTTAGTTACAGGTATTGCATTCTGGCATTATTTATATATGAGAGGAGTCTGGGTA------------------------------GAA---------------------ACAGGTAGTTCTCCAACAGTATTTAGATATATTGATTGG------------------------TTATTGACTGTGCCTCTACTTATCATAGAGTTCTACTTAATCCTTAGAGCT---------GTT---ACTAATGTAGCTGGA---CAATTA------------------------------------TTCATGAAA---TTGTTTGTTGGTTCTTTAGTAATGCTTGTCTTTGGGTATTTAGGTGAG---------TCA------------------GGT------GGA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAATTGCA---TTCGTTATAGCTATGGCTGCATGGATCTATATGATACAAGTATTA---------------TAT------TCA---GGCGAT---GGTAAAACTGCAGTTTCT------GCT---GCAAGTCCAGCCGTT---CAA---TCA---GCT---TAC---AAA---ACTATG---ATGTTAATTATCATTTTT---------------------------------------------------------------GGTTGG---------GCTGTATATCCATTAGGATATGTAATGGGTTATTTAGTT---GGT------------------------------GGCGAAAACGTTTATGCTGCAAACTTAAACCTTATTTACAACATGGCTGACTTTGTTAATAAAATCCTATTTGGATTAATTATTTGGCATGTAGCTGTTAAAGAG---TCACACGGTACT--------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------TFAA--GGGDLDASDMTGVSFWLVTAALLASTVFFFIERDNVSA-KWKTSLTVSGLVTGIAFWHYLYMRGVWV----------E-------TGSSPTVFRYIDW--------LLTVPLLIIEFYLILRA---V-TNVAG-QL------------FMK-LFVGSLVMLVFGYLGE---S------G--G-----------M----------------------NV------TIA-FVIAMAAWIYMIQVL-----Y--S-GD-GKTAVS--A-ASPAV-Q-S-A-Y-K-TM-MLIIIF---------------------GW---AVYPLGYVMGYLV-G----------GENVYAANLNLIYNMADFVNKILFGLIIWHVAVKE-SHGT------------------------------------- [IV-Gamma5-SAR86b]_JH611165 [IV-Gamma5-SAR86b] SAR86_cluster_bacterium_SAR86B_Contig_0_WGS_JH611165 gi|400759182|gb|JH611165| SAR86 cluster bacterium SAR86B genomic scaffold Contig 0, whole genome shotgun sequence SAR86 cluster bacterium SAR86B genomic scaffold Contig 0, whole genome shotgun sequence JH611165 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Gammaproteobacteria/SAR86 cluster] taxon:1123867 genomic_DNA strain 14AUG2012 #na seawater_collected_during_the_Global_Ocean_Sampling_Expedition #na marine #na Genomic insights to SAR86, an abundant and uncultivated marine bacterial lineage Dupont,C.L., Rusch,D.B., Yooseph,S., Lombardo,M.J., Richter,R.A., Valas,R., Novotny,M., YeeGreenbaum,J., Selengut,J.D., Haft,D.H., Halpern,A.L., Lasken,R.S., Nealson,K., Friedman,R. and Venter,J.C. ISME J 6 (6), 11861199 (2012) 22170421 genome assembled from metagenomic dataset ATGAAAAATATTTTTCTTATACTTGTCGGATTAGTTGCGATGCCTACATTTGCAGCTGGTGGTGGAGACCTTGATGCATCAGATATGACTGGAGTTAGTTTCTGGTTAGTAACTGCTGCTCTATTAGCTTCTACAGTATTCTTTTTCATTGAAAGAGATAATGTTAGTGCTAAATGGAAGACATCATTAACTGTATCTGGTTTAGTTACAGGTATTGCATTCTGGCATTATTTATATATGAGAGGAGTCTGGGTAGAAACAGGTAGTTCTCCAACAGTATTTAGATATATTGATTGGTTATTAACTGTGCCTCTACTTATCATAGAGTTCTACTTAATCCTTAGAGCTGTTACTAATGTAGCTGGACAATTATTCATGAAATTGTTTGTTGGTTCTTTAGTAATGCTTGTCTTTGGGTATTTAGGTGAGTCAGGTGGAATGAATGTAACAATTGCATTCGTTATAGCTATGGCTGCATGGATCTATATGATAATGGTTCTATATTCAGGCGATGGTAAAACTGCAGTTTCTGCTGCAAGTCCAGCCGTTCAATCAGCTTACAAAACTATGATGTTAATTATCATTTTTGGTTGGGCTGTATATCCATTAGGATATGTAATGGGTTATTTAGTTGGTGGCGAAAACGTTTATGCTGCAAACTTAAACCTTATTTACAACATGGCTGACTTTGTTAATAAAATCCTATTTGGATTAATTATTTGGCATGTAGCTGTTAAAGAGTCACACGGTACT MKNIFLILVGLVAMPTFAAGGGDLDASDMTGVSFWLVTAALLASTVFFFIERDNVSAKWKTSLTVSGLVTGIAFWHYLYMRGVWVETGSSPTVFRYIDWLLTVPLLIIEFYLILRAVTNVAGQLFMKLFVGSLVMLVFGYLGESGGMNVTIAFVIAMAAWIYMIMVLYSGDGKTAVSAASPAVQSAYKTMMLIIIFGWAVYPLGYVMGYLVGGENVYAANLNLIYNMADFVNKILFGLIIWHVAVKESHGT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAATATTTTTCTTATACTTGTCGGATTAGTTGCGATGCCTACATTTGCAGCT------GGTGGTGGAGACCTTGATGCATCAGATATGACTGGAGTTAGTTTCTGGTTAGTAACTGCTGCTCTATTAGCTTCTACAGTATTCTTTTTCATTGAAAGAGATAATGTTAGTGCT---AAATGGAAGACATCATTAACTGTATCTGGTTTAGTTACAGGTATTGCATTCTGGCATTATTTATATATGAGAGGAGTCTGGGTA------------------------------GAA---------------------ACAGGTAGTTCTCCAACAGTATTTAGATATATTGATTGG------------------------TTATTAACTGTGCCTCTACTTATCATAGAGTTCTACTTAATCCTTAGAGCT---------GTT---ACTAATGTAGCTGGA---CAATTA------------------------------------TTCATGAAA---TTGTTTGTTGGTTCTTTAGTAATGCTTGTCTTTGGGTATTTAGGTGAG---------TCA------------------GGT------GGA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAATTGCA---TTCGTTATAGCTATGGCTGCATGGATCTATATGATAATGGTTCTA---------------TAT------TCA---GGCGAT---GGTAAAACTGCAGTTTCT------GCT---GCAAGTCCAGCCGTT---CAA---TCA---GCT---TAC---AAA---ACTATG---ATGTTAATTATCATTTTT---------------------------------------------------------------GGTTGG---------GCTGTATATCCATTAGGATATGTAATGGGTTATTTAGTT---GGT------------------------------GGCGAAAACGTTTATGCTGCAAACTTAAACCTTATTTACAACATGGCTGACTTTGTTAATAAAATCCTATTTGGATTAATTATTTGGCATGTAGCTGTTAAAGAG---TCACACGGTACT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MKNIFLILVGLVAMPTFAA--GGGDLDASDMTGVSFWLVTAALLASTVFFFIERDNVSA-KWKTSLTVSGLVTGIAFWHYLYMRGVWV----------E-------TGSSPTVFRYIDW--------LLTVPLLIIEFYLILRA---V-TNVAG-QL------------FMK-LFVGSLVMLVFGYLGE---S------G--G-----------M----------------------NV------TIA-FVIAMAAWIYMIMVL-----Y--S-GD-GKTAVS--A-ASPAV-Q-S-A-Y-K-TM-MLIIIF---------------------GW---AVYPLGYVMGYLV-G----------GENVYAANLNLIYNMADFVNKILFGLIIWHVAVKE-SHGT------------------------------------- [IV-Gamma5-SAR86b]_DQ062256 [IV-Gamma5-SAR86b] MEDPR35C06_env_samples_DQ062256 gi|67483457|gb|DQ062256| Uncultured bacterium clone MEDPR35C06 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR35C06 proteorhodopsin gene, partial cds DQ062256 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na AGATATATTGATTGGTTATTAACTGTGCCTCTACTTATCATAGAGTTCTACTTAATCCTTAGAGCTGTTACTAATGTGGCTGGACAATTATTCATGAAATTGTTTGTTGGTTCTTTAGTAATGCTTATCTTTGGATATTTAGGTGAGTCAGGTGGAATGAATGTATTACTTGCATTCTTAATTGCTATGGCTGCATGGATCTATATGATAATGGTTCTATATTCAGGCGATGGTAAAACAGCAGTTGCTGCTGCAAGTCCAGCCGTTCAATCAGCTTATAAAACTATGATGTTAATTATCATCGTTGGTTGGGCTGTATATCCA RYIDWLLTVPLLIIEFYLILRAVTNVAGQLFMKLFVGSLVMLIFGYLGESGGMNVLLAFLIAMAAWIYMIMVLYSGDGKTAVAAASPAVQSAYKTMMLIIIVGWAVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGATTGG------------------------TTATTAACTGTGCCTCTACTTATCATAGAGTTCTACTTAATCCTTAGAGCT---------GTT---ACTAATGTGGCTGGA---CAATTA------------------------------------TTCATGAAA---TTGTTTGTTGGTTCTTTAGTAATGCTTATCTTTGGATATTTAGGTGAG---------TCA------------------GGT------GGA---------------------------------ATG------------------------------------------------------------------AATGTA------------------TTACTTGCA---TTCTTAATTGCTATGGCTGCATGGATCTATATGATAATGGTTCTA---------------TAT------TCA---GGCGAT---GGTAAAACAGCAGTTGCT------GCT---GCAAGTCCAGCCGTT---CAA---TCA---GCT---TAT---AAA---ACTATG---ATGTTAATTATCATCGTT---------------------------------------------------------------GGTTGG---------GCTGTATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLIIEFYLILRA---V-TNVAG-QL------------FMK-LFVGSLVMLIFGYLGE---S------G--G-----------M----------------------NV------LLA-FLIAMAAWIYMIMVL-----Y--S-GD-GKTAVA--A-ASPAV-Q-S-A-Y-K-TM-MLIIIV---------------------GW---AVYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_DQ203557 [IV-Gamma5-SAR86e] MedHO1202F9_env_samples_DQ203557 gi|77547562|gb|DQ203557| Uncultured bacterium clone MedHO1202F9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202F9 predicted proteorhodopsin gene, partial cds DQ203557 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATAGACTGGCTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCAGTGACAAATGTAGCTGCTTCGCTATTTAACAAGCTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAATCGGGAGCAATGGCTGCATTACCAGCATTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTTTGGGGTGGAGAAGGTAAAGCCGCTGTCAGTGGAACTAGTGCTTCTGTACAAACAGCATACAACACGATGATGTGGATCATAATTGTCGGTTGGGCCATTTATCCA RYIDWLLTVPLLMIEFYFILRAVTNVAASLFNKLFFGSLIMLIFGYLGESGAMAALPAFVIGCAAWLYMIWTLWGGEGKAAVSGTSASVQTAYNTMMWIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCA---------GTG---ACAAATGTAGCTGCT---TCGCTA------------------------------------TTTAACAAG---CTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAA---------TCG------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TTACCAGCA---TTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTT---------------TGG------GGT---GGAGAA---GGTAAAGCCGCTGTCAGT------GGA---ACTAGTGCTTCTGTA---CAA---ACA---GCA---TAC---AAC---ACGATG---ATGTGGATCATAATTGTC---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYFILRA---V-TNVAA-SL------------FNK-LFFGSLIMLIFGYLGE---S------G--A-----------M----------------------AA------LPA-FVIGCAAWLYMIWTL-----W--G-GE-GKAAVS--G-TSASV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_DQ203584 [IV-Gamma5-SAR86e] medHO120A10_env_samples_DQ203584 gi|77547616|gb|DQ203584| Uncultured bacterium clone medHO120A10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120A10 predicted proteorhodopsin gene, partial cds DQ203584 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATAGACTGGCTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCAGTGACAAATGTAGCTGCTTCGCTATTTAACAAGCTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAATCGGGAGCAATGGCTGCATTACCAGCATTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTTTGGGGTGGAGAAGGTAAAGCCGCTGTCAGTGGAACTAGTGCTTCTGTACAAACAGCATACAACACGATGATGTGGATCATAATTGTCGGTTGGGCCATTTACCCA RYIDWLLTVPLLMIEFYFILRAVTNVAASLFNKLFFGSLIMLIFGYLGESGAMAALPAFVIGCAAWLYMIWTLWGGEGKAAVSGTSASVQTAYNTMMWIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCA---------GTG---ACAAATGTAGCTGCT---TCGCTA------------------------------------TTTAACAAG---CTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAA---------TCG------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TTACCAGCA---TTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTT---------------TGG------GGT---GGAGAA---GGTAAAGCCGCTGTCAGT------GGA---ACTAGTGCTTCTGTA---CAA---ACA---GCA---TAC---AAC---ACGATG---ATGTGGATCATAATTGTC---------------------------------------------------------------GGTTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYFILRA---V-TNVAA-SL------------FNK-LFFGSLIMLIFGYLGE---S------G--A-----------M----------------------AA------LPA-FVIGCAAWLYMIWTL-----W--G-GE-GKAAVS--G-TSASV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_DQ422381 [IV-Gamma5-SAR86e] clone_med-50m-c2_DQ422381 gi|90024282|gb|DQ422381| Uncultured bacterium clone med-50m-c2 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-c2 putative proteorhodopsin gene, partial cds. DQ422381 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCAGTGACAAATGTAGCTGCTTCGCTATTTAACAAGCTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAATCGGGAGCAATGGCTGCATTACCAGCATTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTTTGGGGTGGAGAAGGTAAAGCCGCTGTCAGTGGAACTAGTGCTTCTGTACAAACAGCATACAACACGATGATGTGGATCATAATTGTCGGTTGGGCCATTTATCCA RYIDWLLTVPLLMIEFYFILRAVTNVAASLFNKLFFGSLIMLIFGYLGESGAMAALPAFVIGCAAWLYMIWTLWGGEGKAAVSGTSASVQTAYNTMMWIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCA---------GTG---ACAAATGTAGCTGCT---TCGCTA------------------------------------TTTAACAAG---CTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAA---------TCG------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TTACCAGCA---TTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTT---------------TGG------GGT---GGAGAA---GGTAAAGCCGCTGTCAGT------GGA---ACTAGTGCTTCTGTA---CAA---ACA---GCA---TAC---AAC---ACGATG---ATGTGGATCATAATTGTC---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYFILRA---V-TNVAA-SL------------FNK-LFFGSLIMLIFGYLGE---S------G--A-----------M----------------------AA------LPA-FVIGCAAWLYMIWTL-----W--G-GE-GKAAVS--G-TSASV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_DQ203416 [IV-Gamma5-SAR86e] MedHO102G6_env_samples_DQ203416 gi|77547280|gb|DQ203416| Uncultured bacterium clone MedHO102G6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102G6 predicted proteorhodopsin gene, partial cds DQ203416 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCAGTGACAAATGTAGCTGCTTCGCTATTTAACAAGCTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAATCGGGAGCAATGGCTGCATTACCAGCATTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTTTGGGGTGGAGAAGGTAAAGCCGCTGTCAGTGGAACTAGTGCTTCTGTACAAACAGCATACAACACGATGATGTGGATCATAATTGTCGGTTGGGCCATCTATCCA RYIDWLLTVPLLMIEFYFILRAVTNVAASLFNKLFFGSLIMLIFGYLGESGAMAALPAFVIGCAAWLYMIWTLWGGEGKAAVSGTSASVQTAYNTMMWIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCA---------GTG---ACAAATGTAGCTGCT---TCGCTA------------------------------------TTTAACAAG---CTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAA---------TCG------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TTACCAGCA---TTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTT---------------TGG------GGT---GGAGAA---GGTAAAGCCGCTGTCAGT------GGA---ACTAGTGCTTCTGTA---CAA---ACA---GCA---TAC---AAC---ACGATG---ATGTGGATCATAATTGTC---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYFILRA---V-TNVAA-SL------------FNK-LFFGSLIMLIFGYLGE---S------G--A-----------M----------------------AA------LPA-FVIGCAAWLYMIWTL-----W--G-GE-GKAAVS--G-TSASV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_DQ422432 [IV-Gamma5-SAR86e] clone_med-50m-g6_DQ422432 gi|90024384|gb|DQ422432| Uncultured bacterium clone med-50m-g6 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-g6 putative proteorhodopsin gene, partial cds. DQ422432 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATATATAGACTGGCTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCAGTGACAAATGTAGCTGCTTCGCTATTTAACAAGCTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAATCGGGAGCAATGGCTGCATTACCAGCATTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTTTGGGGTGGAGAAGGTAAAGCCGCTGTCAGTGGAACTAGTGCTTCTGTACAAACAGCATACAACACGATGATGTGGATCATAATTGTCGGTTGGGCCATTTATCCA RYIDWLLTVPLLMIEFYFILRAVTNVAASLFNKLFFGSLIMLIFGYLGESGAMAALPAFVIGCAAWLYMIWTLWGGEGKAAVSGTSASVQTAYNTMMWIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATAGACTGG------------------------CTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCA---------GTG---ACAAATGTAGCTGCT---TCGCTA------------------------------------TTTAACAAG---CTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAA---------TCG------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TTACCAGCA---TTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTT---------------TGG------GGT---GGAGAA---GGTAAAGCCGCTGTCAGT------GGA---ACTAGTGCTTCTGTA---CAA---ACA---GCA---TAC---AAC---ACGATG---ATGTGGATCATAATTGTC---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYFILRA---V-TNVAA-SL------------FNK-LFFGSLIMLIFGYLGE---S------G--A-----------M----------------------AA------LPA-FVIGCAAWLYMIWTL-----W--G-GE-GKAAVS--G-TSASV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_DQ203454 [IV-Gamma5-SAR86e] medHO10C1_env_samples_DQ203454 gi|77547356|gb|DQ203454| Uncultured bacterium clone medHO10C1 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10C1 predicted proteorhodopsin gene, partial cds DQ203454 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATAGACTGGCTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCAGTGACAAATGTAGCTGCTTCGCTATTTAACAAGCTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAATCGGGAGCAATGGCTGCATTACCAGCATTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTTTGGGGTGGAGAAGGTAAAGCCGCTGTCAGTGGAACTAGTGCTTCTGTACAAACAGCATACAACACGATGATGTGGATCATAATTGTCGGCTGGGCCATCTATCCA RYIDWLLTVPLLMIEFYFILRAVTNVAASLFNKLFFGSLIMLIFGYLGESGAMAALPAFVIGCAAWLYMIWTLWGGEGKAAVSGTSASVQTAYNTMMWIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATAGACTGG------------------------CTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCA---------GTG---ACAAATGTAGCTGCT---TCGCTA------------------------------------TTTAACAAG---CTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAA---------TCG------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TTACCAGCA---TTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTT---------------TGG------GGT---GGAGAA---GGTAAAGCCGCTGTCAGT------GGA---ACTAGTGCTTCTGTA---CAA---ACA---GCA---TAC---AAC---ACGATG---ATGTGGATCATAATTGTC---------------------------------------------------------------GGCTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYFILRA---V-TNVAA-SL------------FNK-LFFGSLIMLIFGYLGE---S------G--A-----------M----------------------AA------LPA-FVIGCAAWLYMIWTL-----W--G-GE-GKAAVS--G-TSASV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_DQ203638 [IV-Gamma5-SAR86e] medHO120F7_env_samples_DQ203638 gi|77547724|gb|DQ203638| Uncultured bacterium clone medHO120F7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120F7 predicted proteorhodopsin gene, partial cds DQ203638 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATAGACTGGCTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCAGTGACAAATGTAGCTGCTTCGCTATTTAACAAGCTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAATCGGGAGCAATGGCTGCATTACCAGCATTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTTTGGGGTGGAGAAGGTAAAGCCGCTGTCAGTGGAACTAGTGCTTCTGTACAAACAGCATACAACACGATGATGTGGATCATAATTGTCGGTTGGGCAATCTACCCA RYIDWLLTVPLLMIEFYFILRAVTNVAASLFNKLFFGSLIMLIFGYLGESGAMAALPAFVIGCAAWLYMIWTLWGGEGKAAVSGTSASVQTAYNTMMWIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCA---------GTG---ACAAATGTAGCTGCT---TCGCTA------------------------------------TTTAACAAG---CTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAA---------TCG------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TTACCAGCA---TTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTT---------------TGG------GGT---GGAGAA---GGTAAAGCCGCTGTCAGT------GGA---ACTAGTGCTTCTGTA---CAA---ACA---GCA---TAC---AAC---ACGATG---ATGTGGATCATAATTGTC---------------------------------------------------------------GGTTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYFILRA---V-TNVAA-SL------------FNK-LFFGSLIMLIFGYLGE---S------G--A-----------M----------------------AA------LPA-FVIGCAAWLYMIWTL-----W--G-GE-GKAAVS--G-TSASV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_DQ422528 [IV-Gamma5-SAR86e] clone_med-tb04-50m-g8_DQ422528 gi|90024576|gb|DQ422528| Uncultured bacterium clone med-tb04-50m-g8 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-g8 putative proteorhodopsin gene, partial cds. DQ422528 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCAGTGACAAATGTAGCTGCTTCGCTATTTAACAAGCTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAATCGGGAGCAATGGCTGCATTACCAGCATTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTTTGGGGTGGAGAAGGTAAAGCCGCTGTCAGTGGAACTAGTGCTTCTGTACAAACAGCATACAACACGATGATGTGGATCATAATTGTCGGTTGGGCTATCTATCCA RYIDWLLTVPLLMIEFYFILRAVTNVAASLFNKLFFGSLIMLIFGYLGESGAMAALPAFVIGCAAWLYMIWTLWGGEGKAAVSGTSASVQTAYNTMMWIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCA---------GTG---ACAAATGTAGCTGCT---TCGCTA------------------------------------TTTAACAAG---CTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAA---------TCG------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TTACCAGCA---TTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTT---------------TGG------GGT---GGAGAA---GGTAAAGCCGCTGTCAGT------GGA---ACTAGTGCTTCTGTA---CAA---ACA---GCA---TAC---AAC---ACGATG---ATGTGGATCATAATTGTC---------------------------------------------------------------GGTTGG---------GCTATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYFILRA---V-TNVAA-SL------------FNK-LFFGSLIMLIFGYLGE---S------G--A-----------M----------------------AA------LPA-FVIGCAAWLYMIWTL-----W--G-GE-GKAAVS--G-TSASV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_DQ422345 [IV-Gamma5-SAR86e] clone_50-1_DQ422345 gi|90024210|gb|DQ422345| Uncultured bacterium clone 50-1 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 50-1 putative proteorhodopsin gene, partial cds. DQ422345 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCAGTGACAAATGTAGCTGCTTCGCTATTTAACAAGCTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAATCGGGAGCAATGGCTGCATTACCAGCATTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTTTGGGGTGGAGAAGGTAAAGCCGCTGTCAGTGGAACTAGTGCTTCTGTACAAACAGCATACAACACGATGATGTGGATCATAATTGTCGGTTGGGCTATTTACCCA RYIDWLLTVPLLMIEFYFILRAVTNVAASLFNKLFFGSLIMLIFGYLGESGAMAALPAFVIGCAAWLYMIWTLWGGEGKAAVSGTSASVQTAYNTMMWIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCA---------GTG---ACAAATGTAGCTGCT---TCGCTA------------------------------------TTTAACAAG---CTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAA---------TCG------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TTACCAGCA---TTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTT---------------TGG------GGT---GGAGAA---GGTAAAGCCGCTGTCAGT------GGA---ACTAGTGCTTCTGTA---CAA---ACA---GCA---TAC---AAC---ACGATG---ATGTGGATCATAATTGTC---------------------------------------------------------------GGTTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYFILRA---V-TNVAA-SL------------FNK-LFFGSLIMLIFGYLGE---S------G--A-----------M----------------------AA------LPA-FVIGCAAWLYMIWTL-----W--G-GE-GKAAVS--G-TSASV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_DQ422336 [IV-Gamma5-SAR86e] clone_med-20m-h12_DQ422336 gi|90024192|gb|DQ422336| Uncultured bacterium clone med-20m-h12 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-h12 putative proteorhodopsin gene, partial cds. DQ422336 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCAGTGACAAATGTAGCTGCTTCGCTATTTAACAAGCTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAATCGGGAGCAATGGCTGCATTACCAGCATTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTTTGGGGTGGAGAAGGTAAAGCCGCTGTCAGTGGAACTAGTGCTTCTGTACAAACAGCATACAACACGATGATGTGGATCATAATTGTCGGTTGGGCTATTTACCCA RYIDWLLTVPLLMIEFYFILRAVTNVAASLFNKLFFGSLIMLIFGYLGESGAMAALPAFVIGCAAWLYMIWTLWGGEGKAAVSGTSASVQTAYNTMMWIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCA---------GTG---ACAAATGTAGCTGCT---TCGCTA------------------------------------TTTAACAAG---CTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAA---------TCG------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TTACCAGCA---TTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTT---------------TGG------GGT---GGAGAA---GGTAAAGCCGCTGTCAGT------GGA---ACTAGTGCTTCTGTA---CAA---ACA---GCA---TAC---AAC---ACGATG---ATGTGGATCATAATTGTC---------------------------------------------------------------GGTTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYFILRA---V-TNVAA-SL------------FNK-LFFGSLIMLIFGYLGE---S------G--A-----------M----------------------AA------LPA-FVIGCAAWLYMIWTL-----W--G-GE-GKAAVS--G-TSASV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_DQ422440 [IV-Gamma5-SAR86e] clone_med-50m-h2_DQ422440 gi|90024400|gb|DQ422440| Uncultured bacterium clone med-50m-h2 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-h2 putative proteorhodopsin gene, partial cds. DQ422440 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCAGTGACAAATGTAGCTGCTTCGCTATTTAACAAGCTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAATCGGGAGCAATGGCTGCATTACCAGCATTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTTTGGGGTGGAGAAGGTAAAGCCGCTGTCAGTGGAACTAGTGCTTCTGTACAAACAGCATACAACACGATGATGTGGATCATAATTGTCGGTTGGGCTATTTACCCA RYIDWLLTVPLLMIEFYFILRAVTNVAASLFNKLFFGSLIMLIFGYLGESGAMAALPAFVIGCAAWLYMIWTLWGGEGKAAVSGTSASVQTAYNTMMWIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCA---------GTG---ACAAATGTAGCTGCT---TCGCTA------------------------------------TTTAACAAG---CTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAA---------TCG------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TTACCAGCA---TTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTT---------------TGG------GGT---GGAGAA---GGTAAAGCCGCTGTCAGT------GGA---ACTAGTGCTTCTGTA---CAA---ACA---GCA---TAC---AAC---ACGATG---ATGTGGATCATAATTGTC---------------------------------------------------------------GGTTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYFILRA---V-TNVAA-SL------------FNK-LFFGSLIMLIFGYLGE---S------G--A-----------M----------------------AA------LPA-FVIGCAAWLYMIWTL-----W--G-GE-GKAAVS--G-TSASV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_DQ422374 [IV-Gamma5-SAR86e] clone_med-50m-b7_DQ422374 gi|90024268|gb|DQ422374| Uncultured bacterium clone med-50m-b7 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-b7 putative proteorhodopsin gene, partial cds. DQ422374 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCAGTGACAAATGTAGCTGCTTCGCTATTTAACAAGCTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAATCGGGAGCAATGGCTGCATTACCAGCATTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTTTGGGGTGGAGAAGGTAAAGCCGCTGTCAGTGGAACTAGTGCTTCTGTACAAACAGCATACAACACGATGATGTGGATCATAATTGTCGGTTGGGCTATTTACCCA RYIDWLLTVPLLMIEFYFILRAVTNVAASLFNKLFFGSLIMLIFGYLGESGAMAALPAFVIGCAAWLYMIWTLWGGEGKAAVSGTSASVQTAYNTMMWIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCA---------GTG---ACAAATGTAGCTGCT---TCGCTA------------------------------------TTTAACAAG---CTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAA---------TCG------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TTACCAGCA---TTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTT---------------TGG------GGT---GGAGAA---GGTAAAGCCGCTGTCAGT------GGA---ACTAGTGCTTCTGTA---CAA---ACA---GCA---TAC---AAC---ACGATG---ATGTGGATCATAATTGTC---------------------------------------------------------------GGTTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYFILRA---V-TNVAA-SL------------FNK-LFFGSLIMLIFGYLGE---S------G--A-----------M----------------------AA------LPA-FVIGCAAWLYMIWTL-----W--G-GE-GKAAVS--G-TSASV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_DQ422224 [IV-Gamma5-SAR86e] clone_med-0m-g3_DQ422224 gi|90023968|gb|DQ422224| Uncultured bacterium clone med-0m-g3 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-g3 putative proteorhodopsin gene, partial cds. DQ422224 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCAGTGACAAATGTAGCTGCTTCGCTATTTAACAAGCTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAATCGGGAGCAATGGCTGCATTACCAGCATTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTTTGGGGTGGAGAAGGTAAAGCCGCTGTCAGTGGAACTAGTGCTTCTGTACAAACAGCATACAACACGATGATGTGGATCATAATTGTCGGTTGGGCTATTTACCCA RYIDWLLTVPLLMIEFYFILRAVTNVAASLFNKLFFGSLIMLIFGYLGESGAMAALPAFVIGCAAWLYMIWTLWGGEGKAAVSGTSASVQTAYNTMMWIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCA---------GTG---ACAAATGTAGCTGCT---TCGCTA------------------------------------TTTAACAAG---CTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAA---------TCG------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TTACCAGCA---TTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTT---------------TGG------GGT---GGAGAA---GGTAAAGCCGCTGTCAGT------GGA---ACTAGTGCTTCTGTA---CAA---ACA---GCA---TAC---AAC---ACGATG---ATGTGGATCATAATTGTC---------------------------------------------------------------GGTTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYFILRA---V-TNVAA-SL------------FNK-LFFGSLIMLIFGYLGE---S------G--A-----------M----------------------AA------LPA-FVIGCAAWLYMIWTL-----W--G-GE-GKAAVS--G-TSASV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_DQ422555 [IV-Gamma5-SAR86e] clone_med-tb04-0m-b11_DQ422555 gi|90024630|gb|DQ422555| Uncultured bacterium clone med-tb04-0m-b11 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-b11 putative proteorhodopsin gene, partial cds. DQ422555 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCAGTGACAAATGTAGCTGCTTCGCTATTTAACAAGCTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAATCGGGAGCAATGGCTGCATTACCAGCATTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTTTGGGGTGGAGAAGGTAAAGCCGCTGTCAGTGGAACTAGTGCTTCTGTACAAACAGCATACAACACGATGATGTGGATCATAATTGTCGGTTGGGCTATTTATCCA RYIDWLLTVPLLMIEFYFILRAVTNVAASLFNKLFFGSLIMLIFGYLGESGAMAALPAFVIGCAAWLYMIWTLWGGEGKAAVSGTSASVQTAYNTMMWIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCA---------GTG---ACAAATGTAGCTGCT---TCGCTA------------------------------------TTTAACAAG---CTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAA---------TCG------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TTACCAGCA---TTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTT---------------TGG------GGT---GGAGAA---GGTAAAGCCGCTGTCAGT------GGA---ACTAGTGCTTCTGTA---CAA---ACA---GCA---TAC---AAC---ACGATG---ATGTGGATCATAATTGTC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYFILRA---V-TNVAA-SL------------FNK-LFFGSLIMLIFGYLGE---S------G--A-----------M----------------------AA------LPA-FVIGCAAWLYMIWTL-----W--G-GE-GKAAVS--G-TSASV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_DQ422516 [IV-Gamma5-SAR86e] clone_med-tb04-50m-f8_DQ422516 gi|90024552|gb|DQ422516| Uncultured bacterium clone med-tb04-50m-f8 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-f8 putative proteorhodopsin gene, partial cds. DQ422516 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCAGTGACAAATGTAGCTGCTTCGCTATTTAACAAGCTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAATCGGGAGCAATGGCTGCATTACCAGCATTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTTTGGGGTGGAGAAGGTAAAGCCGCTGTCAGTGGAACTAGTGCTTCTGTACAAACAGCATACAACACGATGATGTGGATCATAATTGTCGGTTGGGCTATTTATCCA RYIDWLLTVPLLMIEFYFILRAVTNVAASLFNKLFFGSLIMLIFGYLGESGAMAALPAFVIGCAAWLYMIWTLWGGEGKAAVSGTSASVQTAYNTMMWIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCA---------GTG---ACAAATGTAGCTGCT---TCGCTA------------------------------------TTTAACAAG---CTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAA---------TCG------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TTACCAGCA---TTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTT---------------TGG------GGT---GGAGAA---GGTAAAGCCGCTGTCAGT------GGA---ACTAGTGCTTCTGTA---CAA---ACA---GCA---TAC---AAC---ACGATG---ATGTGGATCATAATTGTC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYFILRA---V-TNVAA-SL------------FNK-LFFGSLIMLIFGYLGE---S------G--A-----------M----------------------AA------LPA-FVIGCAAWLYMIWTL-----W--G-GE-GKAAVS--G-TSASV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_DQ422522 [IV-Gamma5-SAR86e] clone_med-tb04-50m-g2_DQ422522 gi|90024564|gb|DQ422522| Uncultured bacterium clone med-tb04-50m-g2 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-g2 putative proteorhodopsin gene, partial cds. DQ422522 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCAGTGACAAATGTAGCTGCTTCGCTATTTAACAAGCTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAATCGGGAGCAATGGCTGCATTACCAGCATTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTTTGGGGTGGAGAAGGTAAAGCCGCTGTCAGTGGAACTAGTGCTTCTGTACAAACAGCATACAACACGATGATGTGGATCATAATTGTCGGTTGGGCTATTTATCCA RYIDWLLTVPLLMIEFYFILRAVTNVAASLFNKLFFGSLIMLIFGYLGESGAMAALPAFVIGCAAWLYMIWTLWGGEGKAAVSGTSASVQTAYNTMMWIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCA---------GTG---ACAAATGTAGCTGCT---TCGCTA------------------------------------TTTAACAAG---CTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAA---------TCG------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TTACCAGCA---TTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTT---------------TGG------GGT---GGAGAA---GGTAAAGCCGCTGTCAGT------GGA---ACTAGTGCTTCTGTA---CAA---ACA---GCA---TAC---AAC---ACGATG---ATGTGGATCATAATTGTC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYFILRA---V-TNVAA-SL------------FNK-LFFGSLIMLIFGYLGE---S------G--A-----------M----------------------AA------LPA-FVIGCAAWLYMIWTL-----W--G-GE-GKAAVS--G-TSASV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_DQ422708 [IV-Gamma5-SAR86e] clone_med-tb04-20m-g2_DQ422708 gi|90024936|gb|DQ422708| Uncultured bacterium clone med-tb04-20m-g2 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-g2 putative proteorhodopsin gene, partial cds. DQ422708 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCAGTGACAAATGTAGCTGCTTCGCTATTTAACAAGCTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAATCGGGAGCAATGGCTGCATTACCAGCATTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTTTGGGGTGGAGAAGGTAAAGCCGCTGTCAGTGGAACTAGTGCTTCTGTACAAACAGCATACAACACGATGATGTGGATCATAATTGTCGGGTGGGCTATTTATCCA RYIDWLLTVPLLMIEFYFILRAVTNVAASLFNKLFFGSLIMLIFGYLGESGAMAALPAFVIGCAAWLYMIWTLWGGEGKAAVSGTSASVQTAYNTMMWIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCA---------GTG---ACAAATGTAGCTGCT---TCGCTA------------------------------------TTTAACAAG---CTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAA---------TCG------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TTACCAGCA---TTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTT---------------TGG------GGT---GGAGAA---GGTAAAGCCGCTGTCAGT------GGA---ACTAGTGCTTCTGTA---CAA---ACA---GCA---TAC---AAC---ACGATG---ATGTGGATCATAATTGTC---------------------------------------------------------------GGGTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYFILRA---V-TNVAA-SL------------FNK-LFFGSLIMLIFGYLGE---S------G--A-----------M----------------------AA------LPA-FVIGCAAWLYMIWTL-----W--G-GE-GKAAVS--G-TSASV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_DQ422469 [IV-Gamma5-SAR86e] clone_med-tb04-50m-b9_DQ422469 gi|90024458|gb|DQ422469| Uncultured bacterium clone med-tb04-50m-b9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-b9 putative proteorhodopsin gene, partial cds. DQ422469 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGGTACATAGACTGGCTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCAGTGACAAATGTAGCTGCTTCGCTATTTAACAAGCTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAATCGGGAGCAATGGCTGCATTACCAGCATTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTTTGGGGTGGAGAAGGTAAAGCCGCTGTCAGTGGAACTAGTGCTTCTGTACAAACAGCATACAACACGATGATGTGGATCATAATTGTCGGTTGGGCTATTTATCCA RYIDWLLTVPLLMIEFYFILRAVTNVAASLFNKLFFGSLIMLIFGYLGESGAMAALPAFVIGCAAWLYMIWTLWGGEGKAAVSGTSASVQTAYNTMMWIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATAGACTGG------------------------CTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCA---------GTG---ACAAATGTAGCTGCT---TCGCTA------------------------------------TTTAACAAG---CTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAA---------TCG------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TTACCAGCA---TTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTT---------------TGG------GGT---GGAGAA---GGTAAAGCCGCTGTCAGT------GGA---ACTAGTGCTTCTGTA---CAA---ACA---GCA---TAC---AAC---ACGATG---ATGTGGATCATAATTGTC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYFILRA---V-TNVAA-SL------------FNK-LFFGSLIMLIFGYLGE---S------G--A-----------M----------------------AA------LPA-FVIGCAAWLYMIWTL-----W--G-GE-GKAAVS--G-TSASV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_DQ422652 [IV-Gamma5-SAR86e] clone_med-tb04-20m-b6_DQ422652 gi|90024824|gb|DQ422652| Uncultured bacterium clone med-tb04-20m-b6 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-b6 putative proteorhodopsin gene, partial cds. DQ422652 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCAGTGACAAATGTAGCTGCTTCGCTATTTAACAAGCTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAATCGGGAGCAATGGCTGCATTACCAGCATTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTTTGGGGTGGAGAAGGTAAAGCCGCTGTCAGTGGAACTAGTGCTTCTGTACAAACAGCATACAACACGATGATGTGGATCATAATTGTCGGTTGGGCTATTTATCCA RYIDWLLTVPLLMIEFYFILRAVTNVAASLFNKLFFGSLIMLIFGYLGESGAMAALPAFVIGCAAWLYMIWTLWGGEGKAAVSGTSASVQTAYNTMMWIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCA---------GTG---ACAAATGTAGCTGCT---TCGCTA------------------------------------TTTAACAAG---CTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAA---------TCG------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TTACCAGCA---TTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTT---------------TGG------GGT---GGAGAA---GGTAAAGCCGCTGTCAGT------GGA---ACTAGTGCTTCTGTA---CAA---ACA---GCA---TAC---AAC---ACGATG---ATGTGGATCATAATTGTC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYFILRA---V-TNVAA-SL------------FNK-LFFGSLIMLIFGYLGE---S------G--A-----------M----------------------AA------LPA-FVIGCAAWLYMIWTL-----W--G-GE-GKAAVS--G-TSASV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_DQ422664 [IV-Gamma5-SAR86e] clone_med-tb04-20m-c6_DQ422664 gi|90024848|gb|DQ422664| Uncultured bacterium clone med-tb04-20m-c6 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-c6 putative proteorhodopsin gene, partial cds. DQ422664 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCAGTGACAAATGTAGCTGCTTCGCTATTTAACAAGCTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAATCGGGAGCAATGGCTGCATTACCAGCATTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTTTGGGGTGGAGAAGGTAAAGCCGCTGTCAGTGGAACTAGTGCTTCTGTACAAACAGCATACAACACGATGATGTGGATCATAATTGTCGGTTGGGCTATTTATCCA RYIDWLLTVPLLMIEFYFILRAVTNVAASLFNKLFFGSLIMLIFGYLGESGAMAALPAFVIGCAAWLYMIWTLWGGEGKAAVSGTSASVQTAYNTMMWIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCA---------GTG---ACAAATGTAGCTGCT---TCGCTA------------------------------------TTTAACAAG---CTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAA---------TCG------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TTACCAGCA---TTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTT---------------TGG------GGT---GGAGAA---GGTAAAGCCGCTGTCAGT------GGA---ACTAGTGCTTCTGTA---CAA---ACA---GCA---TAC---AAC---ACGATG---ATGTGGATCATAATTGTC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYFILRA---V-TNVAA-SL------------FNK-LFFGSLIMLIFGYLGE---S------G--A-----------M----------------------AA------LPA-FVIGCAAWLYMIWTL-----W--G-GE-GKAAVS--G-TSASV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_DQ422603 [IV-Gamma5-SAR86e] clone_med-tb04-0m-f2_DQ422603 gi|90024726|gb|DQ422603| Uncultured bacterium clone med-tb04-0m-f2 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-f2 putative proteorhodopsin gene, partial cds. DQ422603 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCAGTGACAAATGTAGCTGCTTCGCTATTTAACAAGCTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAATCGGGAGCAATGGCTGCATTACCAGCATTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTTTGGGGTGGAGAAGGTAAAGCCGCTGTCAGTGGAACTAGTGCTTCTGTACAAACAGCATACAACACGATGATGTGGATCATAATTGTCGGTTGGGCTATTTATCCA RYIDWLLTVPLLMIEFYFILRAVTNVAASLFNKLFFGSLIMLIFGYLGESGAMAALPAFVIGCAAWLYMIWTLWGGEGKAAVSGTSASVQTAYNTMMWIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCA---------GTG---ACAAATGTAGCTGCT---TCGCTA------------------------------------TTTAACAAG---CTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAA---------TCG------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TTACCAGCA---TTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTT---------------TGG------GGT---GGAGAA---GGTAAAGCCGCTGTCAGT------GGA---ACTAGTGCTTCTGTA---CAA---ACA---GCA---TAC---AAC---ACGATG---ATGTGGATCATAATTGTC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYFILRA---V-TNVAA-SL------------FNK-LFFGSLIMLIFGYLGE---S------G--A-----------M----------------------AA------LPA-FVIGCAAWLYMIWTL-----W--G-GE-GKAAVS--G-TSASV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_DQ422556 [IV-Gamma5-SAR86e] clone_med-tb04-0m-b12_DQ422556 gi|90024632|gb|DQ422556| Uncultured bacterium clone med-tb04-0m-b12 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-b12 putative proteorhodopsin gene, partial cds. DQ422556 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCAGTGACAAATGTAGCTGCTTCGCTATTTAACAAGCTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAATCGGGAGCAATGGCTGCATTACCAGCATTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTTTGGGGTGGAGAAGGTAAAGCCGCTGTCAGTGGAACTAGTGCTTCTGTACAAACAGCATACAACACGATGATGTGGATCATAATTGTCGGTTGGGCTATTTATCCA RYIDWLLTVPLLMIEFYFILRAVTNVAASLFNKLFFGSLIMLIFGYLGESGAMAALPAFVIGCAAWLYMIWTLWGGEGKAAVSGTSASVQTAYNTMMWIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCA---------GTG---ACAAATGTAGCTGCT---TCGCTA------------------------------------TTTAACAAG---CTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAA---------TCG------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TTACCAGCA---TTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTT---------------TGG------GGT---GGAGAA---GGTAAAGCCGCTGTCAGT------GGA---ACTAGTGCTTCTGTA---CAA---ACA---GCA---TAC---AAC---ACGATG---ATGTGGATCATAATTGTC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYFILRA---V-TNVAA-SL------------FNK-LFFGSLIMLIFGYLGE---S------G--A-----------M----------------------AA------LPA-FVIGCAAWLYMIWTL-----W--G-GE-GKAAVS--G-TSASV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_DQ422702 [IV-Gamma5-SAR86e] clone_med-tb04-20m-f8_DQ422702 gi|90024924|gb|DQ422702| Uncultured bacterium clone med-tb04-20m-f8 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-f8 putative proteorhodopsin gene, partial cds. DQ422702 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCAGTGACAAATGTAGCTGCTTCGCTATTTAACAAGCTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAATCGGGAGCAATGGCTGCATTACCAGCATTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTTTGGGGTGGAGAAGGTAAAGCCGCTGTCAGTGGAACTAGTGCTTCTGTACAAACAGCATACAACACGATGATGTGGATCATAATTGTCGGTTGGGCTATTTATCCA RYIDWLLTVPLLMIEFYFILRAVTNVAASLFNKLFFGSLIMLIFGYLGESGAMAALPAFVIGCAAWLYMIWTLWGGEGKAAVSGTSASVQTAYNTMMWIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCA---------GTG---ACAAATGTAGCTGCT---TCGCTA------------------------------------TTTAACAAG---CTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAA---------TCG------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TTACCAGCA---TTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTT---------------TGG------GGT---GGAGAA---GGTAAAGCCGCTGTCAGT------GGA---ACTAGTGCTTCTGTA---CAA---ACA---GCA---TAC---AAC---ACGATG---ATGTGGATCATAATTGTC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYFILRA---V-TNVAA-SL------------FNK-LFFGSLIMLIFGYLGE---S------G--A-----------M----------------------AA------LPA-FVIGCAAWLYMIWTL-----W--G-GE-GKAAVS--G-TSASV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_DQ422294 [IV-Gamma5-SAR86e] clone_med-20m-d6_DQ422294 gi|90024108|gb|DQ422294| Uncultured bacterium clone med-20m-d6 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-d6 putative proteorhodopsin gene, partial cds. DQ422294 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCAGTGACAAATGTAGCTGCTTCGCTATTTAACAAGCTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAATCGGGAGCAATGGCTGCATTACCAGCATTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTTTGGGGTGGAGAAGGTAAAGCCGCTGTCAGTGGAACTAGTGCTTCTGTACAAACAGCATACAACACGATGATGTGGATCATAATTGTCGGTTGGGCTATTTATCCA RYIDWLLTVPLLMIEFYFILRAVTNVAASLFNKLFFGSLIMLIFGYLGESGAMAALPAFVIGCAAWLYMIWTLWGGEGKAAVSGTSASVQTAYNTMMWIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCA---------GTG---ACAAATGTAGCTGCT---TCGCTA------------------------------------TTTAACAAG---CTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAA---------TCG------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TTACCAGCA---TTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTT---------------TGG------GGT---GGAGAA---GGTAAAGCCGCTGTCAGT------GGA---ACTAGTGCTTCTGTA---CAA---ACA---GCA---TAC---AAC---ACGATG---ATGTGGATCATAATTGTC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYFILRA---V-TNVAA-SL------------FNK-LFFGSLIMLIFGYLGE---S------G--A-----------M----------------------AA------LPA-FVIGCAAWLYMIWTL-----W--G-GE-GKAAVS--G-TSASV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_DQ422274 [IV-Gamma5-SAR86e] clone_med-20m-c1_DQ422274 gi|90024068|gb|DQ422274| Uncultured bacterium clone med-20m-c1 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-c1 putative proteorhodopsin gene, partial cds. DQ422274 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na CGATACATTGACTGGCTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCAGTGACAAATGTAGCTGCTTCGCTATTTAACAAGCTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAATCGGGAGCAATGGCTGCATTACCAGCATTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTTTGGGGTGGAGAAGGTAAAGCCGCTGTCAGTGGAACTAGTGCTTCTGTACAAACAGCATACAACACGATGATGTGGATCATAATTGTCGGTTGGGCTATTTATCCA RYIDWLLTVPLLMIEFYFILRAVTNVAASLFNKLFFGSLIMLIFGYLGESGAMAALPAFVIGCAAWLYMIWTLWGGEGKAAVSGTSASVQTAYNTMMWIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATTGACTGG------------------------CTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCA---------GTG---ACAAATGTAGCTGCT---TCGCTA------------------------------------TTTAACAAG---CTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAA---------TCG------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TTACCAGCA---TTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTT---------------TGG------GGT---GGAGAA---GGTAAAGCCGCTGTCAGT------GGA---ACTAGTGCTTCTGTA---CAA---ACA---GCA---TAC---AAC---ACGATG---ATGTGGATCATAATTGTC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYFILRA---V-TNVAA-SL------------FNK-LFFGSLIMLIFGYLGE---S------G--A-----------M----------------------AA------LPA-FVIGCAAWLYMIWTL-----W--G-GE-GKAAVS--G-TSASV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_DQ422220 [IV-Gamma5-SAR86e] clone_med-0m-g10_DQ422220 gi|90023960|gb|DQ422220| Uncultured bacterium clone med-0m-g10 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-g10 putative proteorhodopsin gene, partial cds. DQ422220 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCAGTGACAAATGTAGCTGCTTCGCTATTTAACAAGCTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAATCGGGAGCAATGGCTGCATTACCAGCATTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTTTGGGGTGGAGAAGGTAAAGCCGCTGTCAGTGGAACTAGTGCTTCTGTACAAACAGCATACAACACGATGATGTGGATCATAATTGTCGGTTGGGCTATTTATCCA RYIDWLLTVPLLMIEFYFILRAVTNVAASLFNKLFFGSLIMLIFGYLGESGAMAALPAFVIGCAAWLYMIWTLWGGEGKAAVSGTSASVQTAYNTMMWIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCA---------GTG---ACAAATGTAGCTGCT---TCGCTA------------------------------------TTTAACAAG---CTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAA---------TCG------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TTACCAGCA---TTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTT---------------TGG------GGT---GGAGAA---GGTAAAGCCGCTGTCAGT------GGA---ACTAGTGCTTCTGTA---CAA---ACA---GCA---TAC---AAC---ACGATG---ATGTGGATCATAATTGTC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYFILRA---V-TNVAA-SL------------FNK-LFFGSLIMLIFGYLGE---S------G--A-----------M----------------------AA------LPA-FVIGCAAWLYMIWTL-----W--G-GE-GKAAVS--G-TSASV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_DQ422273 [IV-Gamma5-SAR86e] clone_med-20m-b9_DQ422273 gi|90024066|gb|DQ422273| Uncultured bacterium clone med-20m-b9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-b9 putative proteorhodopsin gene, partial cds. DQ422273 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCAGTGACAAATGTAGCTGCTTCGCTATTTAACAAGCTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAATCGGGAGCAATGGCTGCATTACCAGCATTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTTTGGGGTGGAGAAGGTAAAGCCGCTGTCAGTGGAACTAGTGCTTCTGTACAAACAGCATACAACACGATGATGTGGATCATAATTGTCGGTTGGGCTATTTATCCA RYIDWLLTVPLLMIEFYFILRAVTNVAASLFNKLFFGSLIMLIFGYLGESGAMAALPAFVIGCAAWLYMIWTLWGGEGKAAVSGTSASVQTAYNTMMWIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCA---------GTG---ACAAATGTAGCTGCT---TCGCTA------------------------------------TTTAACAAG---CTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAA---------TCG------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TTACCAGCA---TTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTT---------------TGG------GGT---GGAGAA---GGTAAAGCCGCTGTCAGT------GGA---ACTAGTGCTTCTGTA---CAA---ACA---GCA---TAC---AAC---ACGATG---ATGTGGATCATAATTGTC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYFILRA---V-TNVAA-SL------------FNK-LFFGSLIMLIFGYLGE---S------G--A-----------M----------------------AA------LPA-FVIGCAAWLYMIWTL-----W--G-GE-GKAAVS--G-TSASV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_DQ203436 [IV-Gamma5-SAR86e] medHO10A2_env_samples_DQ203436 gi|77547320|gb|DQ203436| Uncultured bacterium clone medHO10A2 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10A2 predicted proteorhodopsin gene, partial cds DQ203436 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTACATTGATTGGCTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCAGTGACAAATGTAGCTGCTTCGCTATTTAACAAGCTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAATCGGGAGCAATGGCTGCATTACCAGCATTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTTTGGGGTGGAGAAGGTAAAGCCGCTGTCAGTGGAACTAGTGCTTCTGTACAAACAGCATACAACACGATGATGTGGATCATAATTGTCGGGTGGGCAATTTATCCA RYIDWLLTVPLLMIEFYFILRAVTNVAASLFNKLFFGSLIMLIFGYLGESGAMAALPAFVIGCAAWLYMIWTLWGGEGKAAVSGTSASVQTAYNTMMWIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATTGATTGG------------------------CTACTAACAGTTCCTCTATTAATGATAGAGTTTTACTTCATTCTTAGAGCA---------GTG---ACAAATGTAGCTGCT---TCGCTA------------------------------------TTTAACAAG---CTATTCTTCGGTTCTTTGATAATGCTTATATTTGGTTATCTTGGAGAA---------TCG------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TTACCAGCA---TTTGTTATTGGTTGTGCTGCTTGGTTATACATGATCTGGACTCTT---------------TGG------GGT---GGAGAA---GGTAAAGCCGCTGTCAGT------GGA---ACTAGTGCTTCTGTA---CAA---ACA---GCA---TAC---AAC---ACGATG---ATGTGGATCATAATTGTC---------------------------------------------------------------GGGTGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYFILRA---V-TNVAA-SL------------FNK-LFFGSLIMLIFGYLGE---S------G--A-----------M----------------------AA------LPA-FVIGCAAWLYMIWTL-----W--G-GE-GKAAVS--G-TSASV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_EF089399 [IV-Gamma5-SAR86e] EB0_39H12_genomic_EF089399 gi|119713573|gb|EF089399| Uncultured marine bacterium EB0 39H12 genomic sequence Uncultured marine bacterium EB0 39H12 genomic sequence EF089399 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:415437 genomic_DNA other 16-nov-07 #na coastal_ocean/Monterey_Bay/surface_seawater Pacific Ocean marine 36.8 -122 Proteorhodopsin photosystem gene clusters exhibit coevolutionary trends and shared ancestry among diverse marine microbial phyla McCarren,J. and DeLong,E.F. Environ. Microbiol. 9 (4), 846858 (2007) 17359257 metagenomic ATGAAATCAATTATGATTCTTTCTAGTTTTCTAGCAGCTCCATTGTTCGCAGCAAGTGGGGGAGACTTAGACGCAAGTGATTACGTTGGAGTTTCTTTTTGGCTTGTAACTGCAGCACTTTTAGCTGCAACAGTTTTCTTTTTTATTGAAAGAGATAACGTTGGAGAAAAATGGAAAACTTCTTTGACTATTGCTGGTTTAGTTACTGGTATAGCATTTTGGCACTATCTATACATGAGAGGTGTATGGATTGATACAGGTGAAACACCAACTGTATTTAGATACATTGATTGGTTGTTAACAGTTCCATTACTGATGATAGAGTTCTATCTAATTCTCAGAGCTGTTACTACTGTGGCTTCTTCATTATTCAATAAGTTATTTTTTGGCTCATTGATAATGCTTATATTTGGTTACTTAGGTGAATCTGGAAACTTAAACGCTACAATCGCATTTGCTATTGGTTGCGCAGCATGGATTTACATGATCTGGACCCTTTGGGGCGGAGAAGGTAAAGCTGCTGTTAGCGGAACAAGTGCTTCAGTTCAGACTGCGTACAATACTATGATGTGGATTATCATCGTGGGTTGGGCAATCTATCCATTAGGATATGCTGCAGGCTACTTAATGGGAGGCGCTGTTGATGATGCCTCATTAAACCTAATCTACAACTTGGCTGACTTTGTTAACAAAATCCTATTTGGAGTTGTTATCTGGGCTGCTGCTGTTGAAGACAAGAAAGCGTCCGCA MKSIMILSSFLAAPLFAASGGDLDASDYVGVSFWLVTAALLAATVFFFIERDNVGEKWKTSLTIAGLVTGIAFWHYLYMRGVWIDTGETPTVFRYIDWLLTVPLLMIEFYLILRAVTTVASSLFNKLFFGSLIMLIFGYLGESGNLNATIAFAIGCAAWIYMIWTLWGGEGKAAVSGTSASVQTAYNTMMWIIIVGWAIYPLGYAAGYLMGGAVDDASLNLIYNLADFVNKILFGVVIWAAAVEDKKASA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAATCAATTATGATTCTTTCTAGTTTTCTAGCAGCTCCATTGTTCGCAGCA------AGTGGGGGAGACTTAGACGCAAGTGATTACGTTGGAGTTTCTTTTTGGCTTGTAACTGCAGCACTTTTAGCTGCAACAGTTTTCTTTTTTATTGAAAGAGATAACGTTGGAGAA---AAATGGAAAACTTCTTTGACTATTGCTGGTTTAGTTACTGGTATAGCATTTTGGCACTATCTATACATGAGAGGTGTATGGATT------------------------------GAT---------------------ACAGGTGAAACACCAACTGTATTTAGATACATTGATTGG------------------------TTGTTAACAGTTCCATTACTGATGATAGAGTTCTATCTAATTCTCAGAGCT---------GTT---ACTACTGTGGCTTCT---TCATTA------------------------------------TTCAATAAG---TTATTTTTTGGCTCATTGATAATGCTTATATTTGGTTACTTAGGTGAA---------TCT------------------GGA------AAC---------------------------------TTA------------------------------------------------------------------AACGCT------------------ACAATCGCA---TTTGCTATTGGTTGCGCAGCATGGATTTACATGATCTGGACCCTT---------------TGG------GGC---GGAGAA---GGTAAAGCTGCTGTTAGC------GGA---ACAAGTGCTTCAGTT---CAG---ACT---GCG---TAC---AAT---ACTATG---ATGTGGATTATCATCGTG---------------------------------------------------------------GGTTGG---------GCAATCTATCCATTAGGATATGCTGCAGGCTACTTAATG---GGA------------------------------GGC---GCTGTTGATGATGCCTCATTAAACCTAATCTACAACTTGGCTGACTTTGTTAACAAAATCCTATTTGGAGTTGTTATCTGGGCTGCTGCTGTTGAAGAC---AAGAAAGCGTCCGCA------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------MKSIMILSSFLAAPLFAA--SGGDLDASDYVGVSFWLVTAALLAATVFFFIERDNVGE-KWKTSLTIAGLVTGIAFWHYLYMRGVWI----------D-------TGETPTVFRYIDW--------LLTVPLLMIEFYLILRA---V-TTVAS-SL------------FNK-LFFGSLIMLIFGYLGE---S------G--N-----------L----------------------NA------TIA-FAIGCAAWIYMIWTL-----W--G-GE-GKAAVS--G-TSASV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIYPLGYAAGYLM-G----------G-AVDDASLNLIYNLADFVNKILFGVVIWAAAVED-KKASA------------------------------------ [IV-Gamma5-SAR86e]_DQ203793 [IV-Gamma5-SAR86e] SS114a0H7_env_samples_DQ203793 gi|77548034|gb|DQ203793| Uncultured bacterium clone SS114a0H7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0H7 predicted proteorhodopsin gene, partial cds DQ203793 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTATATCGATTGGCTACTAACTGTTCCTCTTCAAATGGTAGAGTTTTATCTAATTTTAGCTGCAGTTACAGTAGTTGCAGGTTCCCTGTTCTGGAAACTCTTCGTAGGGTCATTGGTTATGCTGATCTTTGGTTACATGGGAGAGGCTGGTCTTATGACCGCCTTGCCAGCTTTCGTTATCGGGTGCCTAGCTTGGCTATATATGATTTATGTTCTGTGGTTCGGTGAAGGAAGAGTGGCAGTTAATGCTACTAGTGCTTCAGTTCAAACAGCTTATAACACAATGATGTGGATAATAATCGTTGGTTGGGCAATTTATCCA RYIDWLLTVPLQMVEFYLILAAVTVVAGSLFWKLFVGSLVMLIFGYMGEAGLMTALPAFVIGCLAWLYMIYVLWFGEGRVAVNATSASVQTAYNTMMWIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTATATCGATTGG------------------------CTACTAACTGTTCCTCTTCAAATGGTAGAGTTTTATCTAATTTTAGCTGCA---------GTT---ACAGTAGTTGCAGGT---TCCCTG------------------------------------TTCTGGAAA---CTCTTCGTAGGGTCATTGGTTATGCTGATCTTTGGTTACATGGGAGAG---------GCT------------------GGT------CTT---------------------------------ATG------------------------------------------------------------------ACCGCC------------------TTGCCAGCT---TTCGTTATCGGGTGCCTAGCTTGGCTATATATGATTTATGTTCTG---------------TGG------TTC---GGTGAA---GGAAGAGTGGCAGTTAAT------GCT---ACTAGTGCTTCAGTT---CAA---ACA---GCT---TAT---AAC---ACAATG---ATGTGGATAATAATCGTT---------------------------------------------------------------GGTTGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQMVEFYLILAA---V-TVVAG-SL------------FWK-LFVGSLVMLIFGYMGE---A------G--L-----------M----------------------TA------LPA-FVIGCLAWLYMIYVL-----W--F-GE-GRVAVN--A-TSASV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_DQ203851 [IV-Gamma5-SAR86e] SS114a40H5_env_samples_DQ203851 gi|77548150|gb|DQ203851| Uncultured bacterium clone SS114a40H5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40H5 predicted proteorhodopsin gene, partial cds DQ203851 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATCGATTGGCTACTAACTGTTCCTCTTCAAATGGTAGAGTTTTATCTAATTTTAGCTGCAGTTACAGTAGTTGCAGGTTCCCTGTTCTGGAAACTCTTCGTAGGGTCATTGGTTATGCTGATCTTTGGTTACATGGGAGAGGCTGGTCTTATGACCGCCTTGCCAGCTTTCGTTATCGGGTGCCTAGCTTGGCTATATATGATTTATGTTCTGTGGTTCGGTGAAGGAAGAGTGGCAGTTAATGCTACTAGTGCTTCAGTTCAAACAGCTTATAACACAATGATGTGGATAATAATCGTTGGTTGGGCCATATACCCA RYIDWLLTVPLQMVEFYLILAAVTVVAGSLFWKLFVGSLVMLIFGYMGEAGLMTALPAFVIGCLAWLYMIYVLWFGEGRVAVNATSASVQTAYNTMMWIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATCGATTGG------------------------CTACTAACTGTTCCTCTTCAAATGGTAGAGTTTTATCTAATTTTAGCTGCA---------GTT---ACAGTAGTTGCAGGT---TCCCTG------------------------------------TTCTGGAAA---CTCTTCGTAGGGTCATTGGTTATGCTGATCTTTGGTTACATGGGAGAG---------GCT------------------GGT------CTT---------------------------------ATG------------------------------------------------------------------ACCGCC------------------TTGCCAGCT---TTCGTTATCGGGTGCCTAGCTTGGCTATATATGATTTATGTTCTG---------------TGG------TTC---GGTGAA---GGAAGAGTGGCAGTTAAT------GCT---ACTAGTGCTTCAGTT---CAA---ACA---GCT---TAT---AAC---ACAATG---ATGTGGATAATAATCGTT---------------------------------------------------------------GGTTGG---------GCCATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQMVEFYLILAA---V-TVVAG-SL------------FWK-LFVGSLVMLIFGYMGE---A------G--L-----------M----------------------TA------LPA-FVIGCLAWLYMIYVL-----W--F-GE-GRVAVN--A-TSASV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_DQ203743 [IV-Gamma5-SAR86e] SS114a0A6_env_samples_DQ203743 gi|77547934|gb|DQ203743| Uncultured bacterium clone SS114a0A6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0A6 predicted proteorhodopsin gene, partial cds DQ203743 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGATTGGCTACTAACTGTTCCTCTTCAAATGGTAGAGTTCTATCTAGTTTTAGCTGCAGTTACAGTAGTTGCAGGTTCCCTGTTCTGGAAACTCTTCGTAGGGTCATTGGTTATGCTGATCTTTGGTTACATGGGAGAGGCTGGTCTTATGACCGCCTTGCCAGCTTTCGTTATCGGGTGCCTAGCTTGGCTATATATGATTTATGTTCTGTGGTTCGGTGAAGGAAGAGTGGCAGTTAATGCTACTAGTGCTTCAGTTCAAACAGCTTATAACACAATGATGTGGATAATAATCGTTGGTTGGGCCATTTATCCA RYIDWLLTVPLQMVEFYLVLAAVTVVAGSLFWKLFVGSLVMLIFGYMGEAGLMTALPAFVIGCLAWLYMIYVLWFGEGRVAVNATSASVQTAYNTMMWIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGATTGG------------------------CTACTAACTGTTCCTCTTCAAATGGTAGAGTTCTATCTAGTTTTAGCTGCA---------GTT---ACAGTAGTTGCAGGT---TCCCTG------------------------------------TTCTGGAAA---CTCTTCGTAGGGTCATTGGTTATGCTGATCTTTGGTTACATGGGAGAG---------GCT------------------GGT------CTT---------------------------------ATG------------------------------------------------------------------ACCGCC------------------TTGCCAGCT---TTCGTTATCGGGTGCCTAGCTTGGCTATATATGATTTATGTTCTG---------------TGG------TTC---GGTGAA---GGAAGAGTGGCAGTTAAT------GCT---ACTAGTGCTTCAGTT---CAA---ACA---GCT---TAT---AAC---ACAATG---ATGTGGATAATAATCGTT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQMVEFYLVLAA---V-TVVAG-SL------------FWK-LFVGSLVMLIFGYMGE---A------G--L-----------M----------------------TA------LPA-FVIGCLAWLYMIYVL-----W--F-GE-GRVAVN--A-TSASV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_DQ203722 [IV-Gamma5-SAR86e] medHO155G2_env_samples_DQ203722 gi|77547892|gb|DQ203722| Uncultured bacterium clone medHO155G2 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155G2 predicted proteorhodopsin gene, partial cds DQ203722 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTATATTGATTGGCTGCTAACTGTTCCTCTTCAAATGGTAGAGTTTTATCTAATTTTAGCTGCTGTTACAGTAGTTGCAGGTTCCCTGTTCTGGAAACTCTTCGTAGGGTCATTGGTTATGCTGATCTTTGGTTACATGGGAGAAGCTGGTCTTATGAGCGCCTTACCAGCTTTCGTTATCGGATGCCTAGCTTGGCTATATATGATTTATGTTCTGTGGTTTGGTGAAGGAAGAGTAGCAGTTAATACTACTAGTGCTTCAGTTCAAACAGCTTATAACACCATGATGTGGATAATAATTGTTGGGTGGGCCATTTATCCA RYIDWLLTVPLQMVEFYLILAAVTVVAGSLFWKLFVGSLVMLIFGYMGEAGLMSALPAFVIGCLAWLYMIYVLWFGEGRVAVNTTSASVQTAYNTMMWIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTATATTGATTGG------------------------CTGCTAACTGTTCCTCTTCAAATGGTAGAGTTTTATCTAATTTTAGCTGCT---------GTT---ACAGTAGTTGCAGGT---TCCCTG------------------------------------TTCTGGAAA---CTCTTCGTAGGGTCATTGGTTATGCTGATCTTTGGTTACATGGGAGAA---------GCT------------------GGT------CTT---------------------------------ATG------------------------------------------------------------------AGCGCC------------------TTACCAGCT---TTCGTTATCGGATGCCTAGCTTGGCTATATATGATTTATGTTCTG---------------TGG------TTT---GGTGAA---GGAAGAGTAGCAGTTAAT------ACT---ACTAGTGCTTCAGTT---CAA---ACA---GCT---TAT---AAC---ACCATG---ATGTGGATAATAATTGTT---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQMVEFYLILAA---V-TVVAG-SL------------FWK-LFVGSLVMLIFGYMGE---A------G--L-----------M----------------------SA------LPA-FVIGCLAWLYMIYVL-----W--F-GE-GRVAVN--T-TSASV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_DQ203299 [IV-Gamma5-SAR86e] SS114a80A11_env_samples_DQ203299 gi|77547046|gb|DQ203299| Uncultured bacterium clone SS114a80A11 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a80A11 predicted proteorhodopsin gene, partial cds DQ203299 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_80m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_2003 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATACATAGATTGGCTGTTAACCGTACCTCTTCAAATGGTAGAGTTCTATCTAATTTTAGCGGCAGTTACAGTTGTTGCAGCATCCCTTTTCTGGAAACTCTTTGTAGGGGCATTGGTGATGTTAATTTTTGGTTACATGGGAGAGGCTGGTCTTATGAGTGCCTTGCCAGCTTTCATTATCGGTTGCCTAGCTTGGTTATATATGATTTATGTTCTGTGGTTTGGTGAAGGAAAAACGGCAGTTAATACTACTAGTACTTCAGTCCAAACAGCTTATAACACTATGATGTGGATAATAATTGTTGGTTGGGCCATTTACCCA RYIDWLLTVPLQMVEFYLILAAVTVVAASLFWKLFVGALVMLIFGYMGEAGLMSALPAFIIGCLAWLYMIYVLWFGEGKTAVNTTSTSVQTAYNTMMWIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATAGATTGG------------------------CTGTTAACCGTACCTCTTCAAATGGTAGAGTTCTATCTAATTTTAGCGGCA---------GTT---ACAGTTGTTGCAGCA---TCCCTT------------------------------------TTCTGGAAA---CTCTTTGTAGGGGCATTGGTGATGTTAATTTTTGGTTACATGGGAGAG---------GCT------------------GGT------CTT---------------------------------ATG------------------------------------------------------------------AGTGCC------------------TTGCCAGCT---TTCATTATCGGTTGCCTAGCTTGGTTATATATGATTTATGTTCTG---------------TGG------TTT---GGTGAA---GGAAAAACGGCAGTTAAT------ACT---ACTAGTACTTCAGTC---CAA---ACA---GCT---TAT---AAC---ACTATG---ATGTGGATAATAATTGTT---------------------------------------------------------------GGTTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQMVEFYLILAA---V-TVVAA-SL------------FWK-LFVGALVMLIFGYMGE---A------G--L-----------M----------------------SA------LPA-FIIGCLAWLYMIYVL-----W--F-GE-GKTAVN--T-TSTSV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_DQ203308 [IV-Gamma5-SAR86e] SS114a80B7_env_samples_DQ203308 gi|77547064|gb|DQ203308| Uncultured bacterium clone SS114a80B7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a80B7 predicted proteorhodopsin gene, partial cds DQ203308 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_80m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_2003 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATACATAGATTGGCTGTTAACCGTACCTCTTCAAATGGTAGAGTTCTATCTAATTTTAGCGGCAGTTACAGTTGTTGCAGCATCCCTTTTCTGGAAACTCTTTGTAGGGGCATTGGTGATGTTAATTTTTGGTTACATGGGAGAGGCTGGTCTTATGAGTGCCTTGCCAGCTTTCATTATCGGTTGCCTAGCTTGGTTATATATGATTTATGTTCTGTGGTTTGGTGAAGGAAAAACGGCAGTTAATACTACTAGTACTTCAGTCCAAACAGCTTATAACACTATGATGTGGATAATAATTGTTGGTTGGGCCATTTACCCA RYIDWLLTVPLQMVEFYLILAAVTVVAASLFWKLFVGALVMLIFGYMGEAGLMSALPAFIIGCLAWLYMIYVLWFGEGKTAVNTTSTSVQTAYNTMMWIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATAGATTGG------------------------CTGTTAACCGTACCTCTTCAAATGGTAGAGTTCTATCTAATTTTAGCGGCA---------GTT---ACAGTTGTTGCAGCA---TCCCTT------------------------------------TTCTGGAAA---CTCTTTGTAGGGGCATTGGTGATGTTAATTTTTGGTTACATGGGAGAG---------GCT------------------GGT------CTT---------------------------------ATG------------------------------------------------------------------AGTGCC------------------TTGCCAGCT---TTCATTATCGGTTGCCTAGCTTGGTTATATATGATTTATGTTCTG---------------TGG------TTT---GGTGAA---GGAAAAACGGCAGTTAAT------ACT---ACTAGTACTTCAGTC---CAA---ACA---GCT---TAT---AAC---ACTATG---ATGTGGATAATAATTGTT---------------------------------------------------------------GGTTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQMVEFYLILAA---V-TVVAA-SL------------FWK-LFVGALVMLIFGYMGE---A------G--L-----------M----------------------SA------LPA-FIIGCLAWLYMIYVL-----W--F-GE-GKTAVN--T-TSTSV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_1105151526192 [IV-Gamma5-SAR86e] JCVI_ORF_1105151526192_GS000c_Open_Ocean_5m jcvi|1105151526192| 1105151526192 JCVI ORF 1105151526192 1105151526192 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.22_0.8 other #na 25-FEB-2003 Open_Ocean/5m_depth/S_36.7_psu/GS000c/Sargasso_Stations_3/Sargasso_Sea Sargasso Sea marine 32.174835 -64.01017 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf CATGAAATCAATTTTATTCTTTGTAGCTTAGTCGCTACACCAATATTTGCAGCTAGTGGGGGAGATCTAGATGCCAATGATTACGTTGGTATTTCTTTCTGGCTTGTTACTGCAGCCATGCTAGCTGCGACAGTTTTCTTCTTTATGGAAAGAAGCAGTGTAGAAGGCAAGTGGAAAACTTCTTTGACAATAGCCGGCTTAATTTGCGGTATTGCTTTTTGGCATTATCTGTATATGAGAGGTGTATGGATAGAAACAGGTGAAACTCCTACTGTCTTTAGATACATAGACTGGCTTTTAACTGTCCCGCTTCAAATGGTCGAGTTCTATTTGATCTTAGCAGCAGTCACTGCAGTTGCAGCTTCACTTTTCTGGAAGCTCTTTGTAGGCGCTTTAGTTATGCTCATCTTTGGTTACATGGGAGAAGCTGGCCTTATGAGTGCTTTGCCTGCTTTCATAATAGGCTGTCTAGCCTGGTTATATATGATTTATGTCTTGTGGTTTGGGGAAGGAAAGACAGCAGTTAATACAACTAGTGCTTCAGTTCAGACAGCATATAACACTATGATGTGGATCATAATAGTAGGTTGGGCAATTTATCCCGCAGGATATGTTTTTGGTTACCTCCTTGGCACAGTTGATTCTAGTTCATTAAATTTAATTTATAACTTAGCAGATTTTGTAAATAAAATACTATTTGGTGTTGTGATTTGGAAAGCTGCAATAGACGATAAACAAACAGCG HEINFILCSLVATPIFAASGGDLDANDYVGISFWLVTAAMLAATVFFFMERSSVEGKWKTSLTIAGLICGIAFWHYLYMRGVWIETGETPTVFRYIDWLLTVPLQMVEFYLILAAVTAVAASLFWKLFVGALVMLIFGYMGEAGLMSALPAFIIGCLAWLYMIYVLWFGEGKTAVNTTSASVQTAYNTMMWIIIVGWAIYPAGYVFGYLLGTVDSSSLNLIYNLADFVNKILFGVVIWKAAIDDKQTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATGAAATCAATTTTATTCTTTGTAGCTTAGTCGCTACACCAATATTTGCAGCT------AGTGGGGGAGATCTAGATGCCAATGATTACGTTGGTATTTCTTTCTGGCTTGTTACTGCAGCCATGCTAGCTGCGACAGTTTTCTTCTTTATGGAAAGAAGCAGTGTAGAAGGC---AAGTGGAAAACTTCTTTGACAATAGCCGGCTTAATTTGCGGTATTGCTTTTTGGCATTATCTGTATATGAGAGGTGTATGGATA------------------------------GAA---------------------ACAGGTGAAACTCCTACTGTCTTTAGATACATAGACTGG------------------------CTTTTAACTGTCCCGCTTCAAATGGTCGAGTTCTATTTGATCTTAGCAGCA---------GTC---ACTGCAGTTGCAGCT---TCACTT------------------------------------TTCTGGAAG---CTCTTTGTAGGCGCTTTAGTTATGCTCATCTTTGGTTACATGGGAGAA---------GCT------------------GGC------CTT---------------------------------ATG------------------------------------------------------------------AGTGCT------------------TTGCCTGCT---TTCATAATAGGCTGTCTAGCCTGGTTATATATGATTTATGTCTTG---------------TGG------TTT---GGGGAA---GGAAAGACAGCAGTTAAT------ACA---ACTAGTGCTTCAGTT---CAG---ACA---GCA---TAT---AAC---ACTATG---ATGTGGATCATAATAGTA---------------------------------------------------------------GGTTGG---------GCAATTTATCCCGCAGGATATGTTTTTGGTTACCTCCTT------------------------------------GGC---ACAGTTGATTCTAGTTCATTAAATTTAATTTATAACTTAGCAGATTTTGTAAATAAAATACTATTTGGTGTTGTGATTTGGAAAGCTGCAATAGACGAT---AAACAAACAGCG--------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------HEINFILCSLVATPIFAA--SGGDLDANDYVGISFWLVTAAMLAATVFFFMERSSVEG-KWKTSLTIAGLICGIAFWHYLYMRGVWI----------E-------TGETPTVFRYIDW--------LLTVPLQMVEFYLILAA---V-TAVAA-SL------------FWK-LFVGALVMLIFGYMGE---A------G--L-----------M----------------------SA------LPA-FIIGCLAWLYMIYVL-----W--F-GE-GKTAVN--T-TSASV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIYPAGYVFGYLL------------G-TVDSSSLNLIYNLADFVNKILFGVVIWKAAIDD-KQTA------------------------------------- [IV-Gamma5-SAR86e]_DQ203834 [IV-Gamma5-SAR86e] SS114a40F2_env_samples_DQ203834 gi|77548116|gb|DQ203834| Uncultured bacterium clone SS114a40F2 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40F2 predicted proteorhodopsin gene, partial cds DQ203834 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGACTGGCTTTTAACTGTCCCGCTTCAAATGGTCGAGTTCTATTTGATCTTAGCAGCAGTCACTGCAGTTGCAGCTTCACTTTTCTGGAAGCTCTTTGTAGGCGCTTTAGTTATGCTCATCTTTGGTTACATGGGAGAAGCTGGCCTTATGAGTGCTTTGCCTGCTTTCATAATAGGCTGTCTAGCCTGGTTATATATGATTTATGTCTTGTGGTTTGGGGAAGGAAAGACAGCAGTTAATACAACTAGTGCTTCAGTTCAGACAGCATATAACACTATGATGTGGATCATAATAGTAGGTTGGGCCATCTATCCA RYIDWLLTVPLQMVEFYLILAAVTAVAASLFWKLFVGALVMLIFGYMGEAGLMSALPAFIIGCLAWLYMIYVLWFGEGKTAVNTTSASVQTAYNTMMWIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGACTGG------------------------CTTTTAACTGTCCCGCTTCAAATGGTCGAGTTCTATTTGATCTTAGCAGCA---------GTC---ACTGCAGTTGCAGCT---TCACTT------------------------------------TTCTGGAAG---CTCTTTGTAGGCGCTTTAGTTATGCTCATCTTTGGTTACATGGGAGAA---------GCT------------------GGC------CTT---------------------------------ATG------------------------------------------------------------------AGTGCT------------------TTGCCTGCT---TTCATAATAGGCTGTCTAGCCTGGTTATATATGATTTATGTCTTG---------------TGG------TTT---GGGGAA---GGAAAGACAGCAGTTAAT------ACA---ACTAGTGCTTCAGTT---CAG---ACA---GCA---TAT---AAC---ACTATG---ATGTGGATCATAATAGTA---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQMVEFYLILAA---V-TAVAA-SL------------FWK-LFVGALVMLIFGYMGE---A------G--L-----------M----------------------SA------LPA-FIIGCLAWLYMIYVL-----W--F-GE-GKTAVN--T-TSASV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_DQ339321 [IV-Gamma5-SAR86e] clone_S-S80M-G7_DQ339321 gi|85681615|gb|DQ339321| Uncultured bacterium clone S-S80M-G7 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-G7 predicted proteorhodopsin gene, partial cds. DQ339321 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTTTTAACTGTCCCGCTTCAAATGGTCGAGTTCTATTTGACCTTAGCAGCAGTCACTGCAGTTGCAGCTTCACTTTTCTGGAAGCTCTTTGTAGGCGCTTTAGTTATGCTCATCTTTGGTTACATGGGAGAAGCTGGCCTTATGAGTGCTTTGCCTGCTTTCATAATAGGCTGTCTAGCCTGGTTATATATGATTTATGTCTTGTGGTTTGGGGAAGGAAAGACAGCAGTTAATACAACTAGTGCTTCAGTTCAGACAGCATATAACACTATGATGTGGATCATAATAGTAGGGTGGGCCATATATCCA RYIDWLLTVPLQMVEFYLTLAAVTAVAASLFWKLFVGALVMLIFGYMGEAGLMSALPAFIIGCLAWLYMIYVLWFGEGKTAVNTTSASVQTAYNTMMWIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTTTTAACTGTCCCGCTTCAAATGGTCGAGTTCTATTTGACCTTAGCAGCA---------GTC---ACTGCAGTTGCAGCT---TCACTT------------------------------------TTCTGGAAG---CTCTTTGTAGGCGCTTTAGTTATGCTCATCTTTGGTTACATGGGAGAA---------GCT------------------GGC------CTT---------------------------------ATG------------------------------------------------------------------AGTGCT------------------TTGCCTGCT---TTCATAATAGGCTGTCTAGCCTGGTTATATATGATTTATGTCTTG---------------TGG------TTT---GGGGAA---GGAAAGACAGCAGTTAAT------ACA---ACTAGTGCTTCAGTT---CAG---ACA---GCA---TAT---AAC---ACTATG---ATGTGGATCATAATAGTA---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQMVEFYLTLAA---V-TAVAA-SL------------FWK-LFVGALVMLIFGYMGE---A------G--L-----------M----------------------SA------LPA-FIIGCLAWLYMIYVL-----W--F-GE-GKTAVN--T-TSASV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_DQ339299 [IV-Gamma5-SAR86e] clone_S-S80M-E8_DQ339299 gi|85681571|gb|DQ339299| Uncultured bacterium clone S-S80M-E8 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-E8 predicted proteorhodopsin gene, partial cds. DQ339299 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTTTTAACTGTCCCGCTTCAAATGGTCGAGTTCTATTTGATCTTAGCAGCAGTCACTGCAGTTGCAGCTTCACTTTTCTGGAAGCTCTTTGTAGGCGCTTTAGTTATGCTCATCTTTGGTTACATGGGAGAAGCTGGCCTTATGAGTGCTTTGCCTGCTTTCATAATAGGCTGTCTAGCCTGGTTATATATGATTTATGTCTTGTGGTTTGGGGAAGGAAAGACAGCAGTTAATACAACTAGTGCTTCAGTTCAGACAGCATATAACACTATGATGTGGATCATAATAGTAGGTTGGGCCATTTATCCA RYIDWLLTVPLQMVEFYLILAAVTAVAASLFWKLFVGALVMLIFGYMGEAGLMSALPAFIIGCLAWLYMIYVLWFGEGKTAVNTTSASVQTAYNTMMWIIIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTTTTAACTGTCCCGCTTCAAATGGTCGAGTTCTATTTGATCTTAGCAGCA---------GTC---ACTGCAGTTGCAGCT---TCACTT------------------------------------TTCTGGAAG---CTCTTTGTAGGCGCTTTAGTTATGCTCATCTTTGGTTACATGGGAGAA---------GCT------------------GGC------CTT---------------------------------ATG------------------------------------------------------------------AGTGCT------------------TTGCCTGCT---TTCATAATAGGCTGTCTAGCCTGGTTATATATGATTTATGTCTTG---------------TGG------TTT---GGGGAA---GGAAAGACAGCAGTTAAT------ACA---ACTAGTGCTTCAGTT---CAG---ACA---GCA---TAT---AAC---ACTATG---ATGTGGATCATAATAGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQMVEFYLILAA---V-TAVAA-SL------------FWK-LFVGALVMLIFGYMGE---A------G--L-----------M----------------------SA------LPA-FIIGCLAWLYMIYVL-----W--F-GE-GKTAVN--T-TSASV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ926146 [IV-Gamma5-SAR86e] BOUM_OTU059_env_samples gb|KJ926146| Uncultured bacterium clone BOUM OTU059 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU059 putative proteorhodopsin gene, partial cds KJ926146 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 39.0995 5.3403333 #na #na #na #na #na GTCGATTGGCTTTTAACTGTCCCTCTTCAAATGGTCGAGTTCTATTTGATCTTAGCAGCAGTCACTGTAGTTGCAGCTTCACTTTTCTGGAAGCTCTTTGTAGGTGCTTTAGTTATGCTCATCTTTGGTTACATGGGAGAAGCTGGCCACATGAGTCCTATGCCTGCTTTCATAATCGGCTGTCTAGCTTGGTTATATATGATTTATGTCTTGTGGTTTGGGGAAGGAAAGACGGCAGTTAATACAACTAGCGCTTCAGTTCAGACAGCATATAACACTATGATGTGGATCATAATAGTTGGATGGGCCATCTAC VDWLLTVPLQMVEFYLILAAVTVVAASLFWKLFVGALVMLIFGYMGEAGHMSPMPAFIIGCLAWLYMIYVLWFGEGKTAVNTTSASVQTAYNTMMWIIIVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCGATTGG------------------------CTTTTAACTGTCCCTCTTCAAATGGTCGAGTTCTATTTGATCTTAGCAGCA---------GTC---ACTGTAGTTGCAGCT---TCACTT------------------------------------TTCTGGAAG---CTCTTTGTAGGTGCTTTAGTTATGCTCATCTTTGGTTACATGGGAGAA---------GCT------------------GGC------CAC---------------------------------ATG------------------------------------------------------------------AGTCCT------------------ATGCCTGCT---TTCATAATCGGCTGTCTAGCTTGGTTATATATGATTTATGTCTTG---------------TGG------TTT---GGGGAA---GGAAAGACGGCAGTTAAT------ACA---ACTAGCGCTTCAGTT---CAG---ACA---GCA---TAT---AAC---ACTATG---ATGTGGATCATAATAGTT---------------------------------------------------------------GGATGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LLTVPLQMVEFYLILAA---V-TVVAA-SL------------FWK-LFVGALVMLIFGYMGE---A------G--H-----------M----------------------SP------MPA-FIIGCLAWLYMIYVL-----W--F-GE-GKTAVN--T-TSASV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ926145 [IV-Gamma5-SAR86e] BOUM_OTU058_env_samples gb|KJ926145| Uncultured bacterium clone BOUM OTU058 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU058 putative proteorhodopsin gene, partial cds KJ926145 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 39.0995 5.3403333 #na #na #na #na #na GTAGATTGGTTATTGACTGTTCCCTTACAAATGGTTGAGTTCTACTTGATACTAGCTGCTGTGACTGCGGTCGCTGCATCTCTTTTTTGGAAGTTGTTTGTTGGATCCTTGATCATGCTTATTTTTGGATACATGGGTGAAGCTGGTTTGATGTCTGCTTTACCTGCATTTCTAATAGGTTGTGCTGCTTGGATCTACATGATCTACATTTTATGGTTTGGAGAAGGTAAAGCAGTAGTTACTACAACAAGTGCTTCTGTACAAACAGCTTATAACACCATGATGTGGATCATTATAGTGGGATGGGCCATATAC VDWLLTVPLQMVEFYLILAAVTAVAASLFWKLFVGSLIMLIFGYMGEAGLMSALPAFLIGCAAWIYMIYILWFGEGKAVVTTTSASVQTAYNTMMWIIIVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGATTGG------------------------TTATTGACTGTTCCCTTACAAATGGTTGAGTTCTACTTGATACTAGCTGCT---------GTG---ACTGCGGTCGCTGCA---TCTCTT------------------------------------TTTTGGAAG---TTGTTTGTTGGATCCTTGATCATGCTTATTTTTGGATACATGGGTGAA---------GCT------------------GGT------TTG---------------------------------ATG------------------------------------------------------------------TCTGCT------------------TTACCTGCA---TTTCTAATAGGTTGTGCTGCTTGGATCTACATGATCTACATTTTA---------------TGG------TTT---GGAGAA---GGTAAAGCAGTAGTTACT------ACA---ACAAGTGCTTCTGTA---CAA---ACA---GCT---TAT---AAC---ACCATG---ATGTGGATCATTATAGTG---------------------------------------------------------------GGATGG---------GCCATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LLTVPLQMVEFYLILAA---V-TAVAA-SL------------FWK-LFVGSLIMLIFGYMGE---A------G--L-----------M----------------------SA------LPA-FLIGCAAWIYMIYIL-----W--F-GE-GKAVVT--T-TSASV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_1105112994554 [IV-Gamma5-SAR86e] JCVI_ORF_1105112994554_GS015_Coastal_2m jcvi|1105112994554| 1105112994554 JCVI ORF 1105112994554 1105112994554 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 08-janv-04 Coastal/2m_depth/S_36_psu/GS015/Off_Key_West/FL/Caribbean_Sea Caribbean Sea marine 24.488333 -83.07 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAATCTTTATTGATTCTATCAAGCATGATCGCAGCTCCTCTATTTGCCGCTTCAGGTGGTGATTTAGATTCTGACGATTTTGTTGGCGTTTCCTTTTGGCTAGTTACAGCTGCTATGGCGGCTGCTACGGTTTTTTTCTTTGCGGAAAGAAGCAATGTAGAAGGCAAATGGAAAACTTCATTAACAGTTGCAGGCTTAATCTGCGGTATAGCTTTTTGGCACTACCTATACATGAGAGGTGTTTGGGTTGATACTGGAGAAACACCTACAGTATTTAGATATATAGACTGGTTATTAACAGTACCACTGCAGATGGTCGAGTTCTACTTGATACTTGCAGCAGTCACAGTTGTTGCTGGATCTTTATTCTGGCAACTTTTACTTGGTTCACTAGTCATGTTAATTTTTGGTTACATGGGTGAAGCAGGTGTTATGGCAGCATTGCCAGCATTCATCATTGGAATGGCAGCATGGTTGTACATGATATATGTACTATACATGGGAGCAGGTAAAACTGTCGTAGCTACCACCAGTGCCTCTGTCCAAACAGCATACAATTCAATGCTATTGATCATAGTAGTTGGTTGGGCTATCTATCCTTTAGGTTATGTTTTTGGATACCTAATGGGTGCAGTGGATGCAGATACATTAAATTTAATTTATAACCTTGCTGATTTCATCAACAAAATCTTATTTGGTCTTGTGATTTGGAAGGCAGCTGTAGACGATAAGCAAACAGCT MKSLLILSSMIAAPLFAASGGDLDSDDFVGVSFWLVTAAMAAATVFFFAERSNVEGKWKTSLTVAGLICGIAFWHYLYMRGVWVDTGETPTVFRYIDWLLTVPLQMVEFYLILAAVTVVAGSLFWQLLLGSLVMLIFGYMGEAGVMAALPAFIIGMAAWLYMIYVLYMGAGKTVVATTSASVQTAYNSMLLIIVVGWAIYPLGYVFGYLMGAVDADTLNLIYNLADFINKILFGLVIWKAAVDDKQTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAATCTTTATTGATTCTATCAAGCATGATCGCAGCTCCTCTATTTGCCGCT------TCAGGTGGTGATTTAGATTCTGACGATTTTGTTGGCGTTTCCTTTTGGCTAGTTACAGCTGCTATGGCGGCTGCTACGGTTTTTTTCTTTGCGGAAAGAAGCAATGTAGAAGGC---AAATGGAAAACTTCATTAACAGTTGCAGGCTTAATCTGCGGTATAGCTTTTTGGCACTACCTATACATGAGAGGTGTTTGGGTT------------------------------GAT---------------------ACTGGAGAAACACCTACAGTATTTAGATATATAGACTGG------------------------TTATTAACAGTACCACTGCAGATGGTCGAGTTCTACTTGATACTTGCAGCA---------GTC---ACAGTTGTTGCTGGA---TCTTTA------------------------------------TTCTGGCAA---CTTTTACTTGGTTCACTAGTCATGTTAATTTTTGGTTACATGGGTGAA---------GCA------------------GGT------GTT---------------------------------ATG------------------------------------------------------------------GCAGCA------------------TTGCCAGCA---TTCATCATTGGAATGGCAGCATGGTTGTACATGATATATGTACTA---------------TAC------ATG---GGAGCA---GGTAAAACTGTCGTAGCT------ACC---ACCAGTGCCTCTGTC---CAA---ACA---GCA---TAC---AAT---TCAATG---CTATTGATCATAGTAGTT---------------------------------------------------------------GGTTGG---------GCTATCTATCCTTTAGGTTATGTTTTTGGATACCTAATG------------------------------------GGT---GCAGTGGATGCAGATACATTAAATTTAATTTATAACCTTGCTGATTTCATCAACAAAATCTTATTTGGTCTTGTGATTTGGAAGGCAGCTGTAGACGAT---AAGCAAACAGCT--------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------MKSLLILSSMIAAPLFAA--SGGDLDSDDFVGVSFWLVTAAMAAATVFFFAERSNVEG-KWKTSLTVAGLICGIAFWHYLYMRGVWV----------D-------TGETPTVFRYIDW--------LLTVPLQMVEFYLILAA---V-TVVAG-SL------------FWQ-LLLGSLVMLIFGYMGE---A------G--V-----------M----------------------AA------LPA-FIIGMAAWLYMIYVL-----Y--M-GA-GKTVVA--T-TSASV-Q-T-A-Y-N-SM-LLIIVV---------------------GW---AIYPLGYVFGYLM------------G-AVDADTLNLIYNLADFINKILFGLVIWKAAVDD-KQTA------------------------------------- [IV-Gamma5-SAR86e]_1105117013720 [IV-Gamma5-SAR86e] JCVI_ORF_1105117013720_GS000a_Open_Ocean_5m jcvi|1105117013720| 1105117013720 JCVI ORF 1105117013720 1105117013720 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 26-FEB-2003 Open_Ocean/5m_depth/S_36.7_psu/GS000a/Sargasso_Station_11/Sargasso_Sea Sargasso Sea marine 31.175 -64.32433 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAATCTTTATTGATTCTATCAAGCATGATCGCAGCTCCTCTATTTGCCGCTTCAGGCGGTGATTTAGATTCTGACGATTTTGTTGGTGTTTCCTTTTGGCTAGTTACAGCTGCTATGGCGGCTGCTACAGTTTTTTTCTTTGCGGAAAGAAGCAATGTAGAAGGCAAATGGAAAACTTCATTAACAGTTGCAGGTTTAATTTGCGGTATAGCTTTTTGGCACTACCTATACATGAGAGGTGTTTGGGTTGATACTGGAGAAACACCTACAGTATTTAGATATATAGACTGGTTATTAACAGTACCACTGCAGATGGTCGAGTTCTACTTGATACTTGCAGCAGTCACAGTTGTTGCCGGATCTTTATTCTGGCAACTTTTACTTGGTTCATTAGTCATGTTAATTTTTGGTTACATGGGTGAAGCAGGTGTTATGGCAGCATTGCCAGCATTCATCATTGGAATGGCAGCATGGTTGTACATGATCTATGTACTATACATGGGAGCAGGTAAAACTGTCGTCGCCACCACCAGTGCCTCTGTCCAAACAGCATACAATTCAATGCTATTGATCATAGTAGTTGGTTGGGCTATCTATCCTTTAGGTTATGTTTTTGGATACCTAATGGGTGCAGTGGATGCAGACACATTAAATTTAATTTATAACCTTGCTGATTTCATCAACAAAATCTTATTTGGTCTTGTGATTTGGAAGGCAGCTGTAGACGATAAGCAAACAGCT MKSLLILSSMIAAPLFAASGGDLDSDDFVGVSFWLVTAAMAAATVFFFAERSNVEGKWKTSLTVAGLICGIAFWHYLYMRGVWVDTGETPTVFRYIDWLLTVPLQMVEFYLILAAVTVVAGSLFWQLLLGSLVMLIFGYMGEAGVMAALPAFIIGMAAWLYMIYVLYMGAGKTVVATTSASVQTAYNSMLLIIVVGWAIYPLGYVFGYLMGAVDADTLNLIYNLADFINKILFGLVIWKAAVDDKQTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAATCTTTATTGATTCTATCAAGCATGATCGCAGCTCCTCTATTTGCCGCT------TCAGGCGGTGATTTAGATTCTGACGATTTTGTTGGTGTTTCCTTTTGGCTAGTTACAGCTGCTATGGCGGCTGCTACAGTTTTTTTCTTTGCGGAAAGAAGCAATGTAGAAGGC---AAATGGAAAACTTCATTAACAGTTGCAGGTTTAATTTGCGGTATAGCTTTTTGGCACTACCTATACATGAGAGGTGTTTGGGTT------------------------------GAT---------------------ACTGGAGAAACACCTACAGTATTTAGATATATAGACTGG------------------------TTATTAACAGTACCACTGCAGATGGTCGAGTTCTACTTGATACTTGCAGCA---------GTC---ACAGTTGTTGCCGGA---TCTTTA------------------------------------TTCTGGCAA---CTTTTACTTGGTTCATTAGTCATGTTAATTTTTGGTTACATGGGTGAA---------GCA------------------GGT------GTT---------------------------------ATG------------------------------------------------------------------GCAGCA------------------TTGCCAGCA---TTCATCATTGGAATGGCAGCATGGTTGTACATGATCTATGTACTA---------------TAC------ATG---GGAGCA---GGTAAAACTGTCGTCGCC------ACC---ACCAGTGCCTCTGTC---CAA---ACA---GCA---TAC---AAT---TCAATG---CTATTGATCATAGTAGTT---------------------------------------------------------------GGTTGG---------GCTATCTATCCTTTAGGTTATGTTTTTGGATACCTAATG------------------------------------GGT---GCAGTGGATGCAGACACATTAAATTTAATTTATAACCTTGCTGATTTCATCAACAAAATCTTATTTGGTCTTGTGATTTGGAAGGCAGCTGTAGACGAT---AAGCAAACAGCT--------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------MKSLLILSSMIAAPLFAA--SGGDLDSDDFVGVSFWLVTAAMAAATVFFFAERSNVEG-KWKTSLTVAGLICGIAFWHYLYMRGVWV----------D-------TGETPTVFRYIDW--------LLTVPLQMVEFYLILAA---V-TVVAG-SL------------FWQ-LLLGSLVMLIFGYMGE---A------G--V-----------M----------------------AA------LPA-FIIGMAAWLYMIYVL-----Y--M-GA-GKTVVA--T-TSASV-Q-T-A-Y-N-SM-LLIIVV---------------------GW---AIYPLGYVFGYLM------------G-AVDADTLNLIYNLADFINKILFGLVIWKAAVDD-KQTA------------------------------------- [IV-Gamma5-SAR86e]_1105099201056 [IV-Gamma5-SAR86e] JCVI_ORF_1105099201056_GS029_Coastal_3m jcvi|1105099201056| 1105099201056 JCVI ORF 1105099201056 1105099201056 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 08-FEB-2004 Coastal/3m_depth/S_34.5_psu/GS029/North_James_Bay/Santigo_Island/Galapagos_Islands Pacific Ocean marine -0.2 -90.83528 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATTTCCTATTTCTGTTGGGTTTATAGACTTGTACTCGAGATACATAATAAACGGGAGAGAAATATGAAATCTTTATTGATTCTATCAAGCATGATCGCAGCCCCTCTTTTTGCCGCTTCTGGTGGTGATTTAGATGCTGATGATTTTGTTGGTGTTTCCTTTTGGCTTGTAACTGCAGCTATGGCTGCGGCAACTGTTTTCTTTTTTGCTGAAAGAGGAAACGTTGAAGGCAAATGGAAAACTTCACTTACTGTAGCAGGTCTCATTTGTGGAATAGCTTTTTGGCACTATCTCTATATGAGAGGTGTTTGGGTTGACACTGGGGAGACTCCAACAGTATTCAGATACATTGACTGGCTACTTACAGTTCCACTTCAAATGGTTGAATTCTATTTGATATTAGCTGCTGTAACAGTAGTTGCTGGTTCTTTATTCTGGCAACTTCTACTTGGTTCTTTAGTCATGTTAATTTTTGGTTACATGGGTGAGGCTGGTCTTATGGCTGCTATGCCTGCATTTGTAATTGGAATGCTAGCTTGGTTATATATGATCTATGTTCTTTACATGGGTGCTGGTAAAGCTGCTGTTGCTTCCACAAGCGCTTCAGTTCAGACAGCTTATAACTCAATGTTATTGATCATTGTTGTTGGTTGGGCTATTTATCCTTTAGGTTATGTTTTTGGTTACCTAATGGGTGCAGTAGATTCATCTACATTAAACTTGATCTACAACTTAGCTGACTTTGTTAACAAGATCTTATTTGGTCTTGTGATTTGGAAAGCTGCAATGGACGACAATAGGCAAGCTGCC ISYFCWVYRLVLEIHNKRERNMKSLLILSSMIAAPLFAASGGDLDADDFVGVSFWLVTAAMAAATVFFFAERGNVEGKWKTSLTVAGLICGIAFWHYLYMRGVWVDTGETPTVFRYIDWLLTVPLQMVEFYLILAAVTVVAGSLFWQLLLGSLVMLIFGYMGEAGLMAAMPAFVIGMLAWLYMIYVLYMGAGKAAVASTSASVQTAYNSMLLIIVVGWAIYPLGYVFGYLMGAVDSSTLNLIYNLADFVNKILFGLVIWKAAMDDNRQAA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTCCTATTTCTGTTGGGTTTATAGACTTGTACTCGAGATACATAATAAACGGGAGAGAAATATGAAATCTTTATTGATTCTATCAAGCATGATCGCAGCCCCTCTTTTTGCCGCT------TCTGGTGGTGATTTAGATGCTGATGATTTTGTTGGTGTTTCCTTTTGGCTTGTAACTGCAGCTATGGCTGCGGCAACTGTTTTCTTTTTTGCTGAAAGAGGAAACGTTGAAGGC---AAATGGAAAACTTCACTTACTGTAGCAGGTCTCATTTGTGGAATAGCTTTTTGGCACTATCTCTATATGAGAGGTGTTTGGGTT------------------------------GAC---------------------ACTGGGGAGACTCCAACAGTATTCAGATACATTGACTGG------------------------CTACTTACAGTTCCACTTCAAATGGTTGAATTCTATTTGATATTAGCTGCT---------GTA---ACAGTAGTTGCTGGT---TCTTTA------------------------------------TTCTGGCAA---CTTCTACTTGGTTCTTTAGTCATGTTAATTTTTGGTTACATGGGTGAG---------GCT------------------GGT------CTT---------------------------------ATG------------------------------------------------------------------GCTGCT------------------ATGCCTGCA---TTTGTAATTGGAATGCTAGCTTGGTTATATATGATCTATGTTCTT---------------TAC------ATG---GGTGCT---GGTAAAGCTGCTGTTGCT------TCC---ACAAGCGCTTCAGTT---CAG---ACA---GCT---TAT---AAC---TCAATG---TTATTGATCATTGTTGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCTTTAGGTTATGTTTTTGGTTACCTAATG------------------------------------GGT---GCAGTAGATTCATCTACATTAAACTTGATCTACAACTTAGCTGACTTTGTTAACAAGATCTTATTTGGTCTTGTGATTTGGAAAGCTGCAATGGACGAC---AATAGGCAAGCTGCC------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------ISYFCWVYRLVLEIHNKRERNMKSLLILSSMIAAPLFAA--SGGDLDADDFVGVSFWLVTAAMAAATVFFFAERGNVEG-KWKTSLTVAGLICGIAFWHYLYMRGVWV----------D-------TGETPTVFRYIDW--------LLTVPLQMVEFYLILAA---V-TVVAG-SL------------FWQ-LLLGSLVMLIFGYMGE---A------G--L-----------M----------------------AA------MPA-FVIGMLAWLYMIYVL-----Y--M-GA-GKAAVA--S-TSASV-Q-T-A-Y-N-SM-LLIIVV---------------------GW---AIYPLGYVFGYLM------------G-AVDSSTLNLIYNLADFVNKILFGLVIWKAAMDD-NRQAA------------------------------------ [IV-Gamma5-SAR86e]_1105114122554 [IV-Gamma5-SAR86e] JCVI_ORF_1105114122554_GS032_Mangrove_1m jcvi|1105114122554| 1105114122554 JCVI ORF 1105114122554 1105114122554 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 11-FEB-2004 Mangrove/1m_depth/S_n.a/GS032/Mangrove_on_Isabella_Island/Galapagos_Islands Pacific Ocean marine -0.5938889 -91.06944 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATAAATATGAAATCAATTTTAGTTCTTTCTAGTTTCCTAGCAGCGCCTTTATTCGCGGCAAGTGGTGGAGACTTAGATGCTAATGATTACGTTGGTGTTTCCTTTTGGCTTGTAACAGCAGCTATGGCAGCTGCAACTGTCTTTTTCTTCGCTGAAAGAGGCAATGTTGAAGGTAAATGGAAAACCTCACTCACTGTAGCTGGTTTAATTTGCGGTATAGCCTTTTGGCACTATCTCTATATGAGAGGTGTATGGGTTGATACTGGAGAAACTCCTACAGTATTCAGATATATTGATTGGTTATTAACAGTACCATTGCAGATGGTTGAATTTTATTTGATTCTAGCAGCTGTTACTGTAGTAGCTGGTTCTTTGTTCTGGCAATTGCTATTAGGTTCTTTAGTAATGTTGATTTTCGGTTTCATGGGTGAGGCTGGACTTATGTCTGCAATGCCTGCTTTCATAATCGGAATGCTAGCTTGGCTTTACATGATCTATGTTCTATACATGGGTGCTGGTAAGGCTGCTGTATCTTCAACAAGTGCTTCAGTTCAGACTGCATATAATTCAATGTTATTGATTATTGTTGTTGGTTGGGCAATTTATCCACTAGGTTACGTTTTTGGTTATCTGATGGGTACTGTAGACTCGGCTACATTAAACTTAATCTATAACTTAGCTGACTTTGTTAACAAGATCCTTTTTGGTCTAGTTATCTGGAAAGCTGCTATGGATGATAGGCAAACTGCT INMKSILVLSSFLAAPLFAASGGDLDANDYVGVSFWLVTAAMAAATVFFFAERGNVEGKWKTSLTVAGLICGIAFWHYLYMRGVWVDTGETPTVFRYIDWLLTVPLQMVEFYLILAAVTVVAGSLFWQLLLGSLVMLIFGFMGEAGLMSAMPAFIIGMLAWLYMIYVLYMGAGKAAVSSTSASVQTAYNSMLLIIVVGWAIYPLGYVFGYLMGTVDSATLNLIYNLADFVNKILFGLVIWKAAMDDRQTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAATATGAAATCAATTTTAGTTCTTTCTAGTTTCCTAGCAGCGCCTTTATTCGCGGCA------AGTGGTGGAGACTTAGATGCTAATGATTACGTTGGTGTTTCCTTTTGGCTTGTAACAGCAGCTATGGCAGCTGCAACTGTCTTTTTCTTCGCTGAAAGAGGCAATGTTGAAGGT---AAATGGAAAACCTCACTCACTGTAGCTGGTTTAATTTGCGGTATAGCCTTTTGGCACTATCTCTATATGAGAGGTGTATGGGTT------------------------------GAT---------------------ACTGGAGAAACTCCTACAGTATTCAGATATATTGATTGG------------------------TTATTAACAGTACCATTGCAGATGGTTGAATTTTATTTGATTCTAGCAGCT---------GTT---ACTGTAGTAGCTGGT---TCTTTG------------------------------------TTCTGGCAA---TTGCTATTAGGTTCTTTAGTAATGTTGATTTTCGGTTTCATGGGTGAG---------GCT------------------GGA------CTT---------------------------------ATG------------------------------------------------------------------TCTGCA------------------ATGCCTGCT---TTCATAATCGGAATGCTAGCTTGGCTTTACATGATCTATGTTCTA---------------TAC------ATG---GGTGCT---GGTAAGGCTGCTGTATCT------TCA---ACAAGTGCTTCAGTT---CAG---ACT---GCA---TAT---AAT---TCAATG---TTATTGATTATTGTTGTT---------------------------------------------------------------GGTTGG---------GCAATTTATCCACTAGGTTACGTTTTTGGTTATCTGATG------------------------------------GGT---ACTGTAGACTCGGCTACATTAAACTTAATCTATAACTTAGCTGACTTTGTTAACAAGATCCTTTTTGGTCTAGTTATCTGGAAAGCTGCTATGGATGAT---AGGCAAACTGCT--------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------INMKSILVLSSFLAAPLFAA--SGGDLDANDYVGVSFWLVTAAMAAATVFFFAERGNVEG-KWKTSLTVAGLICGIAFWHYLYMRGVWV----------D-------TGETPTVFRYIDW--------LLTVPLQMVEFYLILAA---V-TVVAG-SL------------FWQ-LLLGSLVMLIFGFMGE---A------G--L-----------M----------------------SA------MPA-FIIGMLAWLYMIYVL-----Y--M-GA-GKAAVS--S-TSASV-Q-T-A-Y-N-SM-LLIIVV---------------------GW---AIYPLGYVFGYLM------------G-TVDSATLNLIYNLADFVNKILFGLVIWKAAMDD-RQTA------------------------------------- [IV-Gamma5-SAR86e]_1105123663306 [IV-Gamma5-SAR86e] JCVI_ORF_1105123663306_GS030_Warm_Seep_19m jcvi|1105123663306| 1105123663306 JCVI ORF 1105123663306 1105123663306 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 09-FEB-2004 Warm_Seep/19m_depth/S_n.a/GS030/Warm_seep/Roca_Redonda/Galapagos_Islands Red Sea marine 0.27222222 -91.63333 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf GGGGCTGTAGTCGCAGCACCTCTTTTCGCAGCCTCTGGCGGTGACTTAGACGCAAACGATTATGTAGGAGTTTCTTTTTGGCTTGTAACTGCAGCTATGGCAGCTGCAACTGTCTTTTTCTTTGCAGAAAGAAGCAGTGTTTCAGGCAAATGGAAAACTTCATTAACTGTTGCTGGTTTAATCTGTGGTATTGCTTTCTGGCACTATCTCTACATGAGAGGTGTTTGGATAGATACAGGTGAAACTCCAACAGTATTCAGATATATAGATTGGTTGCTAACAGTGCCTTTACAGATGGTTGAATTTTACTTAATTCTTGCCGCTGTAACTGCAGTTGCAGGATCTTTATTCTGGAAACTATTACTAGGTTCTTTAGTAATGTTAATTTTCGGTTTCATGGGTGAAGCTGGACTTATGGCTGCATTACCAGCATTTGTTATCGGAATGGCTGCATGGTTGTACATGATTTACGTCTTGTACATGGGTGATGGAAAAGCAGCTGTGGCTAATACAAGTGCTTCAGTTCAAACAGCATATAACACCATGATGTTAATTATTGTTGTTGGATGGGCTATTTATCCTCTAGGTTACGTTTTTGGTTACCTAATGGGTACAGTTGATTCTAGCACTTTAAACCTTATCTATAACTTGGCTGACTTTGTCAACAAGATCCTATTTGGTCTTGTAATCTGGAAAGCTGCTATGGATGATGCTCAAACTGCT GAVVAAPLFAASGGDLDANDYVGVSFWLVTAAMAAATVFFFAERSSVSGKWKTSLTVAGLICGIAFWHYLYMRGVWIDTGETPTVFRYIDWLLTVPLQMVEFYLILAAVTAVAGSLFWKLLLGSLVMLIFGFMGEAGLMAALPAFVIGMAAWLYMIYVLYMGDGKAAVANTSASVQTAYNTMMLIIVVGWAIYPLGYVFGYLMGTVDSSTLNLIYNLADFVNKILFGLVIWKAAMDDAQTA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGGCTGTAGTCGCAGCACCTCTTTTCGCAGCC------TCTGGCGGTGACTTAGACGCAAACGATTATGTAGGAGTTTCTTTTTGGCTTGTAACTGCAGCTATGGCAGCTGCAACTGTCTTTTTCTTTGCAGAAAGAAGCAGTGTTTCAGGC---AAATGGAAAACTTCATTAACTGTTGCTGGTTTAATCTGTGGTATTGCTTTCTGGCACTATCTCTACATGAGAGGTGTTTGGATA------------------------------GAT---------------------ACAGGTGAAACTCCAACAGTATTCAGATATATAGATTGG------------------------TTGCTAACAGTGCCTTTACAGATGGTTGAATTTTACTTAATTCTTGCCGCT---------GTA---ACTGCAGTTGCAGGA---TCTTTA------------------------------------TTCTGGAAA---CTATTACTAGGTTCTTTAGTAATGTTAATTTTCGGTTTCATGGGTGAA---------GCT------------------GGA------CTT---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TTACCAGCA---TTTGTTATCGGAATGGCTGCATGGTTGTACATGATTTACGTCTTG---------------TAC------ATG---GGTGAT---GGAAAAGCAGCTGTGGCT------AAT---ACAAGTGCTTCAGTT---CAA---ACA---GCA---TAT---AAC---ACCATG---ATGTTAATTATTGTTGTT---------------------------------------------------------------GGATGG---------GCTATTTATCCTCTAGGTTACGTTTTTGGTTACCTAATG------------------------------------GGT---ACAGTTGATTCTAGCACTTTAAACCTTATCTATAACTTGGCTGACTTTGTCAACAAGATCCTATTTGGTCTTGTAATCTGGAAAGCTGCTATGGATGAT---GCTCAAACTGCT--------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------GAVVAAPLFAA--SGGDLDANDYVGVSFWLVTAAMAAATVFFFAERSSVSG-KWKTSLTVAGLICGIAFWHYLYMRGVWI----------D-------TGETPTVFRYIDW--------LLTVPLQMVEFYLILAA---V-TAVAG-SL------------FWK-LLLGSLVMLIFGFMGE---A------G--L-----------M----------------------AA------LPA-FVIGMAAWLYMIYVL-----Y--M-GD-GKAAVA--N-TSASV-Q-T-A-Y-N-TM-MLIIVV---------------------GW---AIYPLGYVFGYLM------------G-TVDSSTLNLIYNLADFVNKILFGLVIWKAAMDD-AQTA------------------------------------- [IV-Gamma5-SAR86e]_KJ926214 [IV-Gamma5-SAR86e] RHOMEO_AG_OTU28_u2 gb|KJ926214| Uncultured bacterium cloneRHOMEO AG OTU28 u2 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU28 u2 putative proteorhodopsin gene, partial cds KJ926214 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGTTGTTAACTGTGCCATTGTTGATTATTGAGTTCTATTTAATCCTAAAAGCTGTGACTGATGTTGCTGCTTCACTATTCTATAAACTTTTTGTTGGTTCTATAGTGATGTTAGTGTTTGGTTACTTGGGTGAAGCTGGACTCATGAGTGCTATGCCAGCATTTATTGTCGGGATGTTAGCTTGGATATACATGATCCATACACTTTGGATGGGTGAAGGTGCACAAGCAAGAAACGCATCAGGCAATGCTGCTGTTCAAACTGCCTACAACACTATGATGTGGATCATCATTGTT WLLTVPLLIIEFYLILKAVTDVAASLFYKLFVGSIVMLVFGYLGEAGLMSAMPAFIVGMLAWIYMIHTLWMGEGAQARNASGNAAVQTAYNTMMWIIIV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGTTAACTGTGCCATTGTTGATTATTGAGTTCTATTTAATCCTAAAAGCT---------GTG---ACTGATGTTGCTGCT---TCACTA------------------------------------TTCTATAAA---CTTTTTGTTGGTTCTATAGTGATGTTAGTGTTTGGTTACTTGGGTGAA---------GCT------------------GGA------CTC---------------------------------ATG------------------------------------------------------------------AGTGCT------------------ATGCCAGCA---TTTATTGTCGGGATGTTAGCTTGGATATACATGATCCATACACTT---------------TGG------ATG---GGTGAAGGTGCACAAGCAAGAAACGCA------TCA---GGCAATGCTGCTGTT---CAA---ACT---GCC---TAC---AAC---ACTATG---ATGTGGATCATCATTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLIIEFYLILKA---V-TDVAA-SL------------FYK-LFVGSIVMLVFGYLGE---A------G--L-----------M----------------------SA------MPA-FIVGMLAWIYMIHTL-----W--M-GEGAQARNA--S-GNAAV-Q-T-A-Y-N-TM-MWIIIV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ926213 [IV-Gamma5-SAR86e] RHOMEO_AG_OTU28 gb|KJ926213| Uncultured bacterium cloneRHOMEO AG OTU28 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU28 putative proteorhodopsin gene, partial cds KJ926213 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGTTGTTAACTGTGCCATTGTTGATTATTGAGTTCTATTTAATCCTAAAAGCTGTGACTGATGTTGCTGCTTCACTATTCTATAAACTTTTTGTTGGTTCTATAGTGATGTTAGTGTTTGGTTACTTGGGTGAAGCTGGACTCATGAGTGCTATGCCAGCATTTATTGTTGGGATGTTAGCTTGGATATACATGATCCATACACTTTGGATGGGTGAAGGTGCACAAGCAAGAAACGCATCAGGCAATGCTGCTGTTCAAACTGCCTACAACACTATGATGTGGATCATCATTGTT WLLTVPLLIIEFYLILKAVTDVAASLFYKLFVGSIVMLVFGYLGEAGLMSAMPAFIVGMLAWIYMIHTLWMGEGAQARNASGNAAVQTAYNTMMWIIIV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGTTAACTGTGCCATTGTTGATTATTGAGTTCTATTTAATCCTAAAAGCT---------GTG---ACTGATGTTGCTGCT---TCACTA------------------------------------TTCTATAAA---CTTTTTGTTGGTTCTATAGTGATGTTAGTGTTTGGTTACTTGGGTGAA---------GCT------------------GGA------CTC---------------------------------ATG------------------------------------------------------------------AGTGCT------------------ATGCCAGCA---TTTATTGTTGGGATGTTAGCTTGGATATACATGATCCATACACTT---------------TGG------ATG---GGTGAAGGTGCACAAGCAAGAAACGCA------TCA---GGCAATGCTGCTGTT---CAA---ACT---GCC---TAC---AAC---ACTATG---ATGTGGATCATCATTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLIIEFYLILKA---V-TDVAA-SL------------FYK-LFVGSIVMLVFGYLGE---A------G--L-----------M----------------------SA------MPA-FIVGMLAWIYMIHTL-----W--M-GEGAQARNA--S-GNAAV-Q-T-A-Y-N-TM-MWIIIV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_1105097378034 [IV-Gamma5-SAR86e] JCVI_ORF_1105097378034_GS008_Coastal_1m jcvi|1105097378034| 1105097378034 JCVI ORF 1105097378034 1105097378034 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 16-nov-03 Coastal/1m_depth/S_26.5_psu/GS008/Newport_Harbor/RI/North_American_East_Coast Atlantic Ocean marine 41.485832 -71.35111 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAATTACTTATGCTTTTAGCCGGGGTAATGAGTGTTCCTACTTTTGCTGCATCAGGTGGAGATCTTAACGCAAGTGATTACGTTGGAGTTTCTTTCTGGTTAGTTACAGCTGCATTGTTAGCTGCAACTGCTTTTTTCTTTGTAGAAAGAGATCGCGTAGCTGCAAAATGGAAAACTTCATTAACAATTTCTGGTTTGGTAACAGGTATTGCATTTTGGCATTATCTCTACATGAGAGGTGTCTGGATTGAAACTGGTGAAACACCAACAGTATTTAGATATATTGACTGGTTGTTAACAGTTCCATTGTTGATCATTGAATTCTATTTGATCCTCAAAGCTGTAACTAATGTTGCTGCCTCACTATTCTACAAACTTTTTGTAGGTTCTATAGTGATGTTAGTGTTTGGTTACATGGGTGAAGCAGGACTGATGAGCGCTATGCCAGCGTTTATTGTTGGGATGCTAGCTTGGATATACATGATCCACACCCTTTGGATGGGAGAAGGCGCTGAAGCAAGAAATGCATCACGCAATGCTGCTGTTCAAACTGCATACAACACTATGATGTGGATCATCATTGTGGGTTGGGCAATCTATCCAATTGGTTATGCTTCACGTTATTTAATGTCTGGTGGAATTGATTCCGCATCATTAAATGCTATTTACAACTTAGCCGACTTCGTTAACAAGATCTTATTTGGTGTGTTATTTGGTCAGCTGCTG MKLLMLLAGVMSVPTFAASGGDLNASDYVGVSFWLVTAALLAATAFFFVERDRVAAKWKTSLTISGLVTGIAFWHYLYMRGVWIETGETPTVFRYIDWLLTVPLLIIEFYLILKAVTNVAASLFYKLFVGSIVMLVFGYMGEAGLMSAMPAFIVGMLAWIYMIHTLWMGEGAEARNASRNAAVQTAYNTMMWIIIVGWAIYPIGYASRYLMSGGIDSASLNAIYNLADFVNKILFGVLFGQLL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAATTACTTATGCTTTTAGCCGGGGTAATGAGTGTTCCTACTTTTGCTGCA------TCAGGTGGAGATCTTAACGCAAGTGATTACGTTGGAGTTTCTTTCTGGTTAGTTACAGCTGCATTGTTAGCTGCAACTGCTTTTTTCTTTGTAGAAAGAGATCGCGTAGCTGCA---AAATGGAAAACTTCATTAACAATTTCTGGTTTGGTAACAGGTATTGCATTTTGGCATTATCTCTACATGAGAGGTGTCTGGATT---------------------------------------------------GAAACTGGTGAAACACCAACAGTATTTAGATATATTGACTGG------------------------TTGTTAACAGTTCCATTGTTGATCATTGAATTCTATTTGATCCTCAAAGCT---------GTA---ACTAATGTTGCTGCC---TCACTA------------------------------------TTCTACAAA---CTTTTTGTAGGTTCTATAGTGATGTTAGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------CTG---------------------------------ATG------------------------------------------------------------------AGCGCT------------------ATGCCAGCG---TTTATTGTTGGGATGCTAGCTTGGATATACATGATCCACACCCTT---------------TGG------ATG---GGAGAAGGCGCTGAAGCAAGAAATGCA------TCA---CGCAATGCTGCTGTT---CAA---ACT---GCA---TAC---AAC---ACTATG---ATGTGGATCATCATTGTG---------------------------------------------------------------GGTTGG---------GCAATCTATCCAATTGGTTATGCTTCACGTTATTTAATG------------------------------------TCTGGTGGAATTGATTCCGCATCATTAAATGCTATTTACAACTTAGCCGACTTCGTTAACAAGATCTTATTTGGTGTGTTATTTGGTCAGCTGCTG--------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------MKLLMLLAGVMSVPTFAA--SGGDLNASDYVGVSFWLVTAALLAATAFFFVERDRVAA-KWKTSLTISGLVTGIAFWHYLYMRGVWI-----------------ETGETPTVFRYIDW--------LLTVPLLIIEFYLILKA---V-TNVAA-SL------------FYK-LFVGSIVMLVFGYMGE---A------G--L-----------M----------------------SA------MPA-FIVGMLAWIYMIHTL-----W--M-GEGAEARNA--S-RNAAV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIYPIGYASRYLM------------SGGIDSASLNAIYNLADFVNKILFGVLFGQLL--------------------------------------------- [IV-Gamma5-SAR86e]_1105139262698 [IV-Gamma5-SAR86e] JCVI_ORF_1105139262698_GS008_Coastal_1m jcvi|1105139262698| 1105139262698 JCVI ORF 1105139262698 1105139262698 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 16-nov-03 Coastal/1m_depth/S_26.5_psu/GS008/Newport_Harbor/RI/North_American_East_Coast Atlantic Ocean marine 41.485832 -71.35111 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TTACGGTTTTGCAGGCGGAGATCTCACGCAAGTGATTACGTTGGAGTTTCTTTCTGGCTAGTTACAGCTGCTTTGTTAGCTGCAACTGCGTTTTTCTTTGTTGAGAGAGATCGTGTAGCTGCTAAATGGAAAACTTCATTAACAATTTCTGGTTTGGTTACAGGTATTGCATTTTGGCATTATCTCTACATGAGAGGTGTTTGGATTGATACTGGTGAAACACCAACAGTGTTTAGATACATTGACTGGTTGCTAACAGTACCATTGTTAATTATTGAGTTCTATTTAATCCTAAAAGCTGTGACTGATGTTGCTGCCTCACTATTCTATAAACTTTTTGTTGGTTCGATAGTGATGTTGGTATTTGGTTACATGGGTGAAGCAGGAATAATGAGTGCTATGCCAGCATTTATTGTCGGGATGTTAGCTTGGATATATATGATCCATACACTTTGGATGGGTGAAGGTGCTGAGGCTAGAAATGCTTCTGGTAACGCTGCTGTGCAAACTGCATACAACACCATGATGTGGATCATCATAGTGGGTTGGGCAATTTATCCTATTGGATACGCATCAGGCTACTTAATGACTGGCGGAATTGATGCCGCATCATTAAACCTTATTTACAACCTAGCTGACTTCGTTAACAAAATCCTATTCGGTGTTGTTATCTGGTCTGCTGCTGTAAGTGACTCAGAAAGC LRFCRRRSHASDYVGVSFWLVTAALLAATAFFFVERDRVAAKWKTSLTISGLVTGIAFWHYLYMRGVWIDTGETPTVFRYIDWLLTVPLLIIEFYLILKAVTDVAASLFYKLFVGSIVMLVFGYMGEAGIMSAMPAFIVGMLAWIYMIHTLWMGEGAEARNASGNAAVQTAYNTMMWIIIVGWAIYPIGYASGYLMTGGIDAASLNLIYNLADFVNKILFGVVIWSAAVSDSES ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACGGTTTTGCAGGCGGAGATCT---------------------------------------------------CACGCAAGTGATTACGTTGGAGTTTCTTTCTGGCTAGTTACAGCTGCTTTGTTAGCTGCAACTGCGTTTTTCTTTGTTGAGAGAGATCGTGTAGCTGCT---AAATGGAAAACTTCATTAACAATTTCTGGTTTGGTTACAGGTATTGCATTTTGGCATTATCTCTACATGAGAGGTGTTTGGATT---------------------------------------------------GATACTGGTGAAACACCAACAGTGTTTAGATACATTGACTGG------------------------TTGCTAACAGTACCATTGTTAATTATTGAGTTCTATTTAATCCTAAAAGCT---------GTG---ACTGATGTTGCTGCC---TCACTA------------------------------------TTCTATAAA---CTTTTTGTTGGTTCGATAGTGATGTTGGTATTTGGTTACATGGGTGAA---------GCA------------------GGA------ATA---------------------------------ATG------------------------------------------------------------------AGTGCT------------------ATGCCAGCA---TTTATTGTCGGGATGTTAGCTTGGATATATATGATCCATACACTT---------------TGG------ATG---GGTGAAGGTGCTGAGGCTAGAAATGCT------TCT---GGTAACGCTGCTGTG---CAA---ACT---GCA---TAC---AAC---ACCATG---ATGTGGATCATCATAGTG---------------------------------------------------------------GGTTGG---------GCAATTTATCCTATTGGATACGCATCAGGCTACTTAATG------------------------------------ACTGGCGGAATTGATGCCGCATCATTAAACCTTATTTACAACCTAGCTGACTTCGTTAACAAAATCCTATTCGGTGTTGTTATCTGGTCTGCTGCTGTAAGTGACTCAGAAAGC--------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------LRFCRRRS-----------------HASDYVGVSFWLVTAALLAATAFFFVERDRVAA-KWKTSLTISGLVTGIAFWHYLYMRGVWI-----------------DTGETPTVFRYIDW--------LLTVPLLIIEFYLILKA---V-TDVAA-SL------------FYK-LFVGSIVMLVFGYMGE---A------G--I-----------M----------------------SA------MPA-FIVGMLAWIYMIHTL-----W--M-GEGAEARNA--S-GNAAV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIYPIGYASGYLM------------TGGIDAASLNLIYNLADFVNKILFGVVIWSAAVSDSES--------------------------------------- [IV-Gamma5-SAR86e]_1105140260052 [IV-Gamma5-SAR86e] JCVI_ORF_1105140260052_GS008_Coastal_1m jcvi|1105140260052| 1105140260052 JCVI ORF 1105140260052 1105140260052 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 16-nov-03 Coastal/1m_depth/S_26.5_psu/GS008/Newport_Harbor/RI/North_American_East_Coast Atlantic Ocean marine 41.485832 -71.35111 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAATTACTTATGCTTTTAGCTGGGGTAATGAGTGTTCCTACTTTCGCTGCATCAGGCGGAGATCTCAACGCAAGTGATTACGTTGGAGTTTCTTTCTGGCTAGTTACAGCTGCTTTGTTAGCTGCAACTGCGTTTTTCTTTGTTGAGAGAGATCGTGTAGCTGCTAAATGGAAAACTTCATTAACAATTTCTGGTTTGGTTACAGGTATTGCATTTTGGCATTATCTCTACATGAGAGGTGTTTGGATTGATACTGGTGAAACACCAACAGTGTTTAGATACATTGACTGGTTGCTAACAGTACCATTGTTAATTATTGAGTTCTATTTAATCCTAAAAGCTGTGACTGATGTTGCTGCCTCACTATTCTATAAACTTTTTGTTGGTTCGATAGTGATGTTGGTATTTGGTTACATGGGTGAAGCAGGAATAATGAGTGCTATGCCAGCATTTATTGTCGGGATGTTAGCTTGGATATATATGATCCATACACTTTGGATGGGTGAAGGTGCTGAGGCTAGAAATGCTTCTGGTAACGCTGCTGTGCAAACTGCATACAACACCATGATGTGGATCATCATAGTGGGTTGGGCAATTTATCCTATTGGATACGCATCAGGCTACTTAATGACTGGCGGAATTGATGCCGCATCATTAAACCTTATTTACAACCTAGCTGACTTCGTTAACAAAATCCTATTCGGTGTTGTTATCTGGTCTGCTGCTGTAAGTGACTCAGAAAGC MKLLMLLAGVMSVPTFAASGGDLNASDYVGVSFWLVTAALLAATAFFFVERDRVAAKWKTSLTISGLVTGIAFWHYLYMRGVWIDTGETPTVFRYIDWLLTVPLLIIEFYLILKAVTDVAASLFYKLFVGSIVMLVFGYMGEAGIMSAMPAFIVGMLAWIYMIHTLWMGEGAEARNASGNAAVQTAYNTMMWIIIVGWAIYPIGYASGYLMTGGIDAASLNLIYNLADFVNKILFGVVIWSAAVSDSES ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAATTACTTATGCTTTTAGCTGGGGTAATGAGTGTTCCTACTTTCGCTGCA------TCAGGCGGAGATCTCAACGCAAGTGATTACGTTGGAGTTTCTTTCTGGCTAGTTACAGCTGCTTTGTTAGCTGCAACTGCGTTTTTCTTTGTTGAGAGAGATCGTGTAGCTGCT---AAATGGAAAACTTCATTAACAATTTCTGGTTTGGTTACAGGTATTGCATTTTGGCATTATCTCTACATGAGAGGTGTTTGGATT---------------------------------------------------GATACTGGTGAAACACCAACAGTGTTTAGATACATTGACTGG------------------------TTGCTAACAGTACCATTGTTAATTATTGAGTTCTATTTAATCCTAAAAGCT---------GTG---ACTGATGTTGCTGCC---TCACTA------------------------------------TTCTATAAA---CTTTTTGTTGGTTCGATAGTGATGTTGGTATTTGGTTACATGGGTGAA---------GCA------------------GGA------ATA---------------------------------ATG------------------------------------------------------------------AGTGCT------------------ATGCCAGCA---TTTATTGTCGGGATGTTAGCTTGGATATATATGATCCATACACTT---------------TGG------ATG---GGTGAAGGTGCTGAGGCTAGAAATGCT------TCT---GGTAACGCTGCTGTG---CAA---ACT---GCA---TAC---AAC---ACCATG---ATGTGGATCATCATAGTG---------------------------------------------------------------GGTTGG---------GCAATTTATCCTATTGGATACGCATCAGGCTACTTAATG------------------------------------ACTGGCGGAATTGATGCCGCATCATTAAACCTTATTTACAACCTAGCTGACTTCGTTAACAAAATCCTATTCGGTGTTGTTATCTGGTCTGCTGCTGTAAGTGACTCAGAAAGC--------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------MKLLMLLAGVMSVPTFAA--SGGDLNASDYVGVSFWLVTAALLAATAFFFVERDRVAA-KWKTSLTISGLVTGIAFWHYLYMRGVWI-----------------DTGETPTVFRYIDW--------LLTVPLLIIEFYLILKA---V-TDVAA-SL------------FYK-LFVGSIVMLVFGYMGE---A------G--I-----------M----------------------SA------MPA-FIVGMLAWIYMIHTL-----W--M-GEGAEARNA--S-GNAAV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIYPIGYASGYLM------------TGGIDAASLNLIYNLADFVNKILFGVVIWSAAVSDSES--------------------------------------- [IV-Gamma5-SAR86e]_JX863312 [IV-Gamma5-SAR86e] MALINA_OTU42_136_L_env_samples_JX863312 gi|425477574|gb|JX863312| Uncultured bacterium clone MALINA OTU42 136 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU42 136 L putative proteorhodopsin mRNA, partial cds JX863312 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 08Aug2009 50m_depth Arctic Ocean marine 70.8 -133.73 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTATTAACTGTGCCGTTATTGATTATTGAATTCTATTTAATCCTAAGAGCTGTAACTAACGTTGCTGCATCATTGTTCTACAAGTTATTTGTTGGATCAATCGTGATGCTTGTGTTTGGTTACATGGGTGAATCTGAACTGATGGCTGCATTGCCTGCATTTGCTGTTGGAATGGCTGCTTGGCTTTACATTATCCATACATTATGGATGGGTGAAGGCGCCGAGGCGAGAAATGCTTCTGCTAATGCTGCTGTGTCAACTGCATACAACACTATGATGTGGATCATCATTGTT WLLTVPLLIIEFYLILRAVTNVAASLFYKLFVGSIVMLVFGYMGESELMAALPAFAVGMAAWLYIIHTLWMGEGAEARNASANAAVSTAYNTMMWIIIV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTATTAACTGTGCCGTTATTGATTATTGAATTCTATTTAATCCTAAGAGCT---------GTA---ACTAACGTTGCTGCA---TCATTG------------------------------------TTCTACAAG---TTATTTGTTGGATCAATCGTGATGCTTGTGTTTGGTTACATGGGTGAA---------TCT------------------GAA------CTG---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TTGCCTGCA---TTTGCTGTTGGAATGGCTGCTTGGCTTTACATTATCCATACATTA---------------TGG------ATG---GGTGAAGGCGCCGAGGCGAGAAATGCT------TCT---GCTAATGCTGCTGTG---TCA---ACT---GCA---TAC---AAC---ACTATG---ATGTGGATCATCATTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLIIEFYLILRA---V-TNVAA-SL------------FYK-LFVGSIVMLVFGYMGE---S------E--L-----------M----------------------AA------LPA-FAVGMAAWLYIIHTL-----W--M-GEGAEARNA--S-ANAAV-S-T-A-Y-N-TM-MWIIIV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_JX863311 [IV-Gamma5-SAR86e] MALINA_OTU42_142_L_env_samples_JX863311 gi|425477572|gb|JX863311| Uncultured bacterium clone MALINA OTU42 142 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU42 142 L putative proteorhodopsin mRNA, partial cds JX863311 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 08Aug2009 50m_depth Arctic Ocean marine 70.8 -133.73 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTATTAACTGTGCCGTTATTGATTATTGAATTCTATTTAATCCTAAAAGCTGTAACTAACGTTGCTGCATCATTGTTCTACAAGTTATTTGTTGGATCAATCGTGATGCTTGTGTTTGGTTACATGGGTGAATCTGGACTGATGGCTGCATTGCCTGCATTTGCTGTTGGAATGGCTGCTTGGCTTTACATTATCCATACATTATGGATGGGTGAAGGCGCCGAGGCGAGAAATGCTTCTGCTAATGCTGCTGTGTCAACTGCATACAACACTATGATGTGGATCATCATTGTT WLLTVPLLIIEFYLILKAVTNVAASLFYKLFVGSIVMLVFGYMGESGLMAALPAFAVGMAAWLYIIHTLWMGEGAEARNASANAAVSTAYNTMMWIIIV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTATTAACTGTGCCGTTATTGATTATTGAATTCTATTTAATCCTAAAAGCT---------GTA---ACTAACGTTGCTGCA---TCATTG------------------------------------TTCTACAAG---TTATTTGTTGGATCAATCGTGATGCTTGTGTTTGGTTACATGGGTGAA---------TCT------------------GGA------CTG---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TTGCCTGCA---TTTGCTGTTGGAATGGCTGCTTGGCTTTACATTATCCATACATTA---------------TGG------ATG---GGTGAAGGCGCCGAGGCGAGAAATGCT------TCT---GCTAATGCTGCTGTG---TCA---ACT---GCA---TAC---AAC---ACTATG---ATGTGGATCATCATTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLIIEFYLILKA---V-TNVAA-SL------------FYK-LFVGSIVMLVFGYMGE---S------G--L-----------M----------------------AA------LPA-FAVGMAAWLYIIHTL-----W--M-GEGAEARNA--S-ANAAV-S-T-A-Y-N-TM-MWIIIV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_1105095572174 [IV-Gamma5-SAR86e] JCVI_ORF_1105095572174_GS003_Coastal_1m jcvi|1105095572174| 1105095572174 JCVI ORF 1105095572174 1105095572174 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 21-AUG-2003 Coastal/1m_depth/S_29.9_psu/GS003/Browns_Bank/Gulf_of_Maine/North_American_East_Coast Atlantic Ocean marine 42.85278 -66.217224 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAATTACTTATGCTTTTGGCTGGGGTGATGGCTGTTCCTACTTTTGCTGCTTCTGGAGGAGATCTCAACGCAAATGATTACGTTGGAGTTTCTTTCTGGCTTGTTACAGCTGCTTTGTTAGCTGCAACTGCTTTCTTTTTCATTGAAAGAGATAGAGTGCATTCAAAATGGAAAACATCGTTAACAATTTCTGGTTTAGTTACCGGTATTGCATTCTGGCACTATCTCTACATGAGAGGTGTTTGGATTGATACGGGTGAAACACCAACTGTATATAGATACATTGATTGGTTGTTAACTGTGCCGTTATTAATTATTGAATTCTACTTAATCCTAAAAGCTGTAACTAACGTTGCTGCATCTTTGTTCTACAAGTTATTTGTTGGATCAATCGTGATGCTTGTGTTCGGTTACATGGGTGAATCTGGAATAATGAGTGCGATGCCTGCGTTTATTATTGGGATGGCTGCTTGGCTTTACATGATCCATACGTTATGGATGGGTGAAGGTGCCGAGGCTAGAAATGCTTCTGGTAATGCTGCTGTGTCAACTGCATACAACACTATGATGTGGATCATCATTGTTGGTTGGGCAATTTATCCTTTAGGATATGCATCAGGTTACTTAATGACTGGCGGAATTGACGCTTCTTCATTAAACCTTATTTACAATCTAGCCGACTTTGTTAACAAGATCCTGTTTGGTGTTGTTATCTGGGCAGCTGCTGTAAGTGATTCAGAAAGC MKLLMLLAGVMAVPTFAASGGDLNANDYVGVSFWLVTAALLAATAFFFIERDRVHSKWKTSLTISGLVTGIAFWHYLYMRGVWIDTGETPTVYRYIDWLLTVPLLIIEFYLILKAVTNVAASLFYKLFVGSIVMLVFGYMGESGIMSAMPAFIIGMAAWLYMIHTLWMGEGAEARNASGNAAVSTAYNTMMWIIIVGWAIYPLGYASGYLMTGGIDASSLNLIYNLADFVNKILFGVVIWAAAVSDSES ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAATTACTTATGCTTTTGGCTGGGGTGATGGCTGTTCCTACTTTTGCTGCT------TCTGGAGGAGATCTCAACGCAAATGATTACGTTGGAGTTTCTTTCTGGCTTGTTACAGCTGCTTTGTTAGCTGCAACTGCTTTCTTTTTCATTGAAAGAGATAGAGTGCATTCA---AAATGGAAAACATCGTTAACAATTTCTGGTTTAGTTACCGGTATTGCATTCTGGCACTATCTCTACATGAGAGGTGTTTGGATT---------------------------------------------------GATACGGGTGAAACACCAACTGTATATAGATACATTGATTGG------------------------TTGTTAACTGTGCCGTTATTAATTATTGAATTCTACTTAATCCTAAAAGCT---------GTA---ACTAACGTTGCTGCA---TCTTTG------------------------------------TTCTACAAG---TTATTTGTTGGATCAATCGTGATGCTTGTGTTCGGTTACATGGGTGAA---------TCT------------------GGA------ATA---------------------------------ATG------------------------------------------------------------------AGTGCG------------------ATGCCTGCG---TTTATTATTGGGATGGCTGCTTGGCTTTACATGATCCATACGTTA---------------TGG------ATG---GGTGAAGGTGCCGAGGCTAGAAATGCT------TCT---GGTAATGCTGCTGTG---TCA---ACT---GCA---TAC---AAC---ACTATG---ATGTGGATCATCATTGTT---------------------------------------------------------------GGTTGG---------GCAATTTATCCTTTAGGATATGCATCAGGTTACTTAATG------------------------------------ACTGGCGGAATTGACGCTTCTTCATTAAACCTTATTTACAATCTAGCCGACTTTGTTAACAAGATCCTGTTTGGTGTTGTTATCTGGGCAGCTGCTGTAAGTGATTCAGAAAGC--------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------MKLLMLLAGVMAVPTFAA--SGGDLNANDYVGVSFWLVTAALLAATAFFFIERDRVHS-KWKTSLTISGLVTGIAFWHYLYMRGVWI-----------------DTGETPTVYRYIDW--------LLTVPLLIIEFYLILKA---V-TNVAA-SL------------FYK-LFVGSIVMLVFGYMGE---S------G--I-----------M----------------------SA------MPA-FIIGMAAWLYMIHTL-----W--M-GEGAEARNA--S-GNAAV-S-T-A-Y-N-TM-MWIIIV---------------------GW---AIYPLGYASGYLM------------TGGIDASSLNLIYNLADFVNKILFGVVIWAAAVSDSES--------------------------------------- [IV-Gamma5-SAR86e]_1105091352686 [IV-Gamma5-SAR86e] JCVI_ORF_1105091352686_GS010_Coastal_1m jcvi|1105091352686| 1105091352686 JCVI ORF 1105091352686 1105091352686 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 18-nov-03 Coastal/1m_depth/S_31_psu/GS010/Cape_May/NJ/North_American_East_Coast Atlantic Ocean marine 38.94 -74.685 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATAAGGAGTATTAACATGAAATTACTTATGCTTTTGGCTGGGGTAATGGCGGTTCCTACTTTTGCTGCTTCAGGGGGAGATCTCGACGCTAATGATTACGTTGGAGTTTCTTTCTGGCTAGTTACAGCTGCTTTGTTGGCTGCAACAGCATTCTTTTTCGTTGAAAGAGATAGAGTTCATGCAAAATGGAAAACATCATTAACAATTTCTGGTTTAGTTACCGGTATTGCATTTTGGCACTATCTTTATATGAGAGGTGTTTGGATTGATACTGGTGAGACACCAACAGTGTTTAGATACATTGACTGGTTGTTGACTGTGCCATTGTTGATTATTGAGTTCTACTTAATCCTTAAAGCTGTGACTAATGTTGCTGCATCTTTGTTCTACAAGCTATTTGTGGGTTCATTGGTAATGCTAGTATTTGGTTACTTCGGTGAAGCTGGAATTATGGGTGCAATGCCTGCATTTATTATAGGAATGCTGGCTTGGTTATACATGATCCATACTTTATGGATGGGTGAAGGTGCTGAGGCTAGAAATGCTTCTGGTAACGCTGCTGTGCAAACTGCATACAACACCATGATGTGGATCATCATAGTGGGTTGGGCAATTTATCCTATTGGATACGCATCAGGCTACTTAATGACTGGCGGAATTGATGCCGCATCATTAAACCTTATTTACAACCTGGCTGACTTTGTTAACAAAATCCTATTCGGTGTTGTTATCTGGTCTGCTGCTGTAAGTGACTCAGAAAGC IRSINMKLLMLLAGVMAVPTFAASGGDLDANDYVGVSFWLVTAALLAATAFFFVERDRVHAKWKTSLTISGLVTGIAFWHYLYMRGVWIDTGETPTVFRYIDWLLTVPLLIIEFYLILKAVTNVAASLFYKLFVGSLVMLVFGYFGEAGIMGAMPAFIIGMLAWLYMIHTLWMGEGAEARNASGNAAVQTAYNTMMWIIIVGWAIYPIGYASGYLMTGGIDAASLNLIYNLADFVNKILFGVVIWSAAVSDSES ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAGGAGTATTAACATGAAATTACTTATGCTTTTGGCTGGGGTAATGGCGGTTCCTACTTTTGCTGCT------TCAGGGGGAGATCTCGACGCTAATGATTACGTTGGAGTTTCTTTCTGGCTAGTTACAGCTGCTTTGTTGGCTGCAACAGCATTCTTTTTCGTTGAAAGAGATAGAGTTCATGCA---AAATGGAAAACATCATTAACAATTTCTGGTTTAGTTACCGGTATTGCATTTTGGCACTATCTTTATATGAGAGGTGTTTGGATT---------------------------------------------------GATACTGGTGAGACACCAACAGTGTTTAGATACATTGACTGG------------------------TTGTTGACTGTGCCATTGTTGATTATTGAGTTCTACTTAATCCTTAAAGCT---------GTG---ACTAATGTTGCTGCA---TCTTTG------------------------------------TTCTACAAG---CTATTTGTGGGTTCATTGGTAATGCTAGTATTTGGTTACTTCGGTGAA---------GCT------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------GGTGCA------------------ATGCCTGCA---TTTATTATAGGAATGCTGGCTTGGTTATACATGATCCATACTTTA---------------TGG------ATG---GGTGAAGGTGCTGAGGCTAGAAATGCT------TCT---GGTAACGCTGCTGTG---CAA---ACT---GCA---TAC---AAC---ACCATG---ATGTGGATCATCATAGTG---------------------------------------------------------------GGTTGG---------GCAATTTATCCTATTGGATACGCATCAGGCTACTTAATG------------------------------------ACTGGCGGAATTGATGCCGCATCATTAAACCTTATTTACAACCTGGCTGACTTTGTTAACAAAATCCTATTCGGTGTTGTTATCTGGTCTGCTGCTGTAAGTGACTCAGAAAGC--------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------IRSINMKLLMLLAGVMAVPTFAA--SGGDLDANDYVGVSFWLVTAALLAATAFFFVERDRVHA-KWKTSLTISGLVTGIAFWHYLYMRGVWI-----------------DTGETPTVFRYIDW--------LLTVPLLIIEFYLILKA---V-TNVAA-SL------------FYK-LFVGSLVMLVFGYFGE---A------G--I-----------M----------------------GA------MPA-FIIGMLAWLYMIHTL-----W--M-GEGAEARNA--S-GNAAV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AIYPIGYASGYLM------------TGGIDAASLNLIYNLADFVNKILFGVVIWSAAVSDSES--------------------------------------- [IV-Gamma5-SAR86e]_NZ_AMWX01000001 [IV-Gamma5-SAR86e] 410446507_374629_375369_SAR86_cluster_bacterium_SAR86E_ctg1_WGS gi|410446507|gb|NZ_AMWX01000001| SAR86 cluster bacterium SAR86E ctg1, whole genome shotgun sequence SAR86 cluster bacterium SAR86E ctg1, whole genome shotgun sequence NZ_AMWX01000001 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Gammaproteobacteria/SAR86 cluster] taxon:1208365 genomic_DNA other 10-May-2013 09Apr2009 #na Pacific Ocean marine 32.87 -117.26 #na #na #na #na #na ATGAAATTACTTATGCTTTTAGCTGGTGTAATGGCTGTTCCTACTTTTGCTGCTGGAGACCTTGATCCTAATGATTATGTTGGGGTTTCTTTCTGGCTTGTTACTGCAGCTTTGCTTGCAGCAACAGTTTTCTTCTTTCTTGAAAGAGATAACGTAAGCGCAAAATGGAGAACTTCGTTAACTGTATCAGGTTTGGTTACTGGTATCGCACTTTGGCACTATCTATATATGAGAGGTGTTTGGGTAGATACTGGAACGTCTCCAACCGTATTTAGATACATTGACTGGTTGTTAACTGTTCCATTGTTAATTGTAGAGTTCTATTTAATTCTTAGAGCCGTAACAGATGTTGCTGCTTCATTGTTCTACAAATTATTTTTAGGATCATTGGTAATGTTAGTCTTTGGCTACATGGGTGAAGCGGGAATAATGGCCGCTATGCCTGCATTTATTATTGGGTGTCTTGCTTGGTTCTACATGATCCATACCTTATGGGCTGGTGAAGGCGCACAAGCAAAAAATGCATCTGGTAATGCTGCTGTCCAAACTGCATATAACACCATGATGTGGATTATTATTGTTGGTTGGGCTGTTTATCCTGTTGGTTATTTCATGGGATATTTAGCAGGTGGAGTAGATGAAGGAGCTTTAAACCTAATCTATAACTTAGCTGACTTTATTAACAAAATCCTATTCGGTATTGTTATTTGGTCTGCTGCTGTTAGCGACTCAAATAAA MKLLMLLAGVMAVPTFAAGDLDPNDYVGVSFWLVTAALLAATVFFFLERDNVSAKWRTSLTVSGLVTGIALWHYLYMRGVWVDTGTSPTVFRYIDWLLTVPLLIVEFYLILRAVTDVAASLFYKLFLGSLVMLVFGYMGEAGIMAAMPAFIIGCLAWFYMIHTLWAGEGAQAKNASGNAAVQTAYNTMMWIIIVGWAVYPVGYFMGYLAGGVDEGALNLIYNLADFINKILFGIVIWSAAVSDSNK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAATTACTTATGCTTTTAGCTGGTGTAATGGCTGTTCCTACTTTTGCTGCT------------GGAGACCTTGATCCTAATGATTATGTTGGGGTTTCTTTCTGGCTTGTTACTGCAGCTTTGCTTGCAGCAACAGTTTTCTTCTTTCTTGAAAGAGATAACGTAAGCGCA---AAATGGAGAACTTCGTTAACTGTATCAGGTTTGGTTACTGGTATCGCACTTTGGCACTATCTATATATGAGAGGTGTTTGGGTA---------------------------------------------------GATACTGGAACGTCTCCAACCGTATTTAGATACATTGACTGG------------------------TTGTTAACTGTTCCATTGTTAATTGTAGAGTTCTATTTAATTCTTAGAGCC---------GTA---ACAGATGTTGCTGCT---TCATTG------------------------------------TTCTACAAA---TTATTTTTAGGATCATTGGTAATGTTAGTCTTTGGCTACATGGGTGAA---------GCG------------------GGA------ATA---------------------------------ATG------------------------------------------------------------------GCCGCT------------------ATGCCTGCA---TTTATTATTGGGTGTCTTGCTTGGTTCTACATGATCCATACCTTA---------------TGG------GCT---GGTGAAGGCGCACAAGCAAAAAATGCA------TCT---GGTAATGCTGCTGTC---CAA---ACT---GCA---TAT---AAC---ACCATG---ATGTGGATTATTATTGTT---------------------------------------------------------------GGTTGG---------GCTGTTTATCCTGTTGGTTATTTCATGGGATATTTA---------------------------------------GCAGGTGGAGTAGATGAAGGAGCTTTAAACCTAATCTATAACTTAGCTGACTTTATTAACAAAATCCTATTCGGTATTGTTATTTGGTCTGCTGCTGTTAGCGACTCAAATAAA--------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------MKLLMLLAGVMAVPTFAA----GDLDPNDYVGVSFWLVTAALLAATVFFFLERDNVSA-KWRTSLTVSGLVTGIALWHYLYMRGVWV-----------------DTGTSPTVFRYIDW--------LLTVPLLIVEFYLILRA---V-TDVAA-SL------------FYK-LFLGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------MPA-FIIGCLAWFYMIHTL-----W--A-GEGAQAKNA--S-GNAAV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AVYPVGYFMGYL-------------AGGVDEGALNLIYNLADFINKILFGIVIWSAAVSDSNK--------------------------------------- [IV-Gamma5-SAR86e]_1105107879914 [IV-Gamma5-SAR86e] JCVI_ORF_1105107879914_GS008_Coastal_1m jcvi|1105107879914| 1105107879914 JCVI ORF 1105107879914 1105107879914 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 16-nov-03 Coastal/1m_depth/S_26.5_psu/GS008/Newport_Harbor/RI/North_American_East_Coast Atlantic Ocean marine 41.485832 -71.35111 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAATTACTTATGCTTTTAGCTGGTGTAATGGCTGTTCCTACTTTTGCTGCTGGAGACCTTGATCCTAATGATTATGTTGGGGTTTCTTTCTGGCTTGTTACTGCAGCTTTGCTTGCAGCAACAGTTTTCTTCTTTCTTGAAAGAGATAATGTAAGCGCAAAATGGAGAACTTCGTTAACTGTATCAGGTTTGGTTACTGGTATCGCACTTTGGCACTATCTATATATGAGAGGTGTTTGGGTAGATACAGGAACGTCTCCAACCGTATTTAGATACATTGACTGGTTGTTAACTGTTCCATTGTTAATTGTAGAGTTCTATTTAATTCTTAGAGCCGTAACAGATGTTGCCGCTTCATTGTTCTACAAATTATTTTTAGGATCATTGGTAATGTTAGTCTTTGGCTATATGGGTGAAGCGGGAATAATGGCCGCTATGCCTGCATTTATTATTGGGTGTCTTGCTTGGTTCTACATGATCCATACCTTATGGGCTGGTGAAGGCGCACAAGCAAAAAATGCATCTGGTAATGCTGCTGTCCAAACTGCATACAACACCATGATGTGGATTATTATTGTTGGTTGGGCTGTTTATCCTGTTGGTTATTTCATGGGATATTTAGCAGGTGGAGTAGATGAAGGAGCTTTAAACCTAATCTATAACTTAGCTGACTTTATTAACAAAATCCTATTCGGTATGTTATTGTCGTCCCGCCCCAGG MKLLMLLAGVMAVPTFAAGDLDPNDYVGVSFWLVTAALLAATVFFFLERDNVSAKWRTSLTVSGLVTGIALWHYLYMRGVWVDTGTSPTVFRYIDWLLTVPLLIVEFYLILRAVTDVAASLFYKLFLGSLVMLVFGYMGEAGIMAAMPAFIIGCLAWFYMIHTLWAGEGAQAKNASGNAAVQTAYNTMMWIIIVGWAVYPVGYFMGYLAGGVDEGALNLIYNLADFINKILFGMLLSSRPR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAATTACTTATGCTTTTAGCTGGTGTAATGGCTGTTCCTACTTTTGCTGCT------------GGAGACCTTGATCCTAATGATTATGTTGGGGTTTCTTTCTGGCTTGTTACTGCAGCTTTGCTTGCAGCAACAGTTTTCTTCTTTCTTGAAAGAGATAATGTAAGCGCA---AAATGGAGAACTTCGTTAACTGTATCAGGTTTGGTTACTGGTATCGCACTTTGGCACTATCTATATATGAGAGGTGTTTGGGTA---------------------------------------------------GATACAGGAACGTCTCCAACCGTATTTAGATACATTGACTGG------------------------TTGTTAACTGTTCCATTGTTAATTGTAGAGTTCTATTTAATTCTTAGAGCC---------GTA---ACAGATGTTGCCGCT---TCATTG------------------------------------TTCTACAAA---TTATTTTTAGGATCATTGGTAATGTTAGTCTTTGGCTATATGGGTGAA---------GCG------------------GGA------ATA---------------------------------ATG------------------------------------------------------------------GCCGCT------------------ATGCCTGCA---TTTATTATTGGGTGTCTTGCTTGGTTCTACATGATCCATACCTTA---------------TGG------GCT---GGTGAAGGCGCACAAGCAAAAAATGCA------TCT---GGTAATGCTGCTGTC---CAA---ACT---GCA---TAC---AAC---ACCATG---ATGTGGATTATTATTGTT---------------------------------------------------------------GGTTGG---------GCTGTTTATCCTGTTGGTTATTTCATGGGATATTTA---------------------------------------GCAGGTGGAGTAGATGAAGGAGCTTTAAACCTAATCTATAACTTAGCTGACTTTATTAACAAAATCCTATTCGGTATGTTATTGTCGTCCCGCCCCAGG------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------MKLLMLLAGVMAVPTFAA----GDLDPNDYVGVSFWLVTAALLAATVFFFLERDNVSA-KWRTSLTVSGLVTGIALWHYLYMRGVWV-----------------DTGTSPTVFRYIDW--------LLTVPLLIVEFYLILRA---V-TDVAA-SL------------FYK-LFLGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------MPA-FIIGCLAWFYMIHTL-----W--A-GEGAQAKNA--S-GNAAV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AVYPVGYFMGYL-------------AGGVDEGALNLIYNLADFINKILFGMLLSSRPR-------------------------------------------- [IV-Gamma5-SAR86e]_1105090255236 [IV-Gamma5-SAR86e] JCVI_ORF_1105090255236_GS008_Coastal_1m jcvi|1105090255236| 1105090255236 JCVI ORF 1105090255236 1105090255236 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 16-nov-03 Coastal/1m_depth/S_26.5_psu/GS008/Newport_Harbor/RI/North_American_East_Coast Atlantic Ocean marine 41.485832 -71.35111 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf CTGTCCATGGGGGAGAGTATTTTATTAATAAAAAAGGAGTATCAAATGAAATTACTTATGCTTTTAGCTGGTGTAATGGCTGTTCCTACTTTTGCTGCTGGAGACCTTGATCCTAATGATTATGTTGGGGTTTCTTTCTGGCTTGTTACTGCAGCTTTGCTTGCAGCAACAGTTTTCTTCTTTCTTGAAAGAGATAATGTAAGCGCAAAATGGAGAACTTCGTTAACTGTATCAGGTTTGGTTACTGGTATCGCACTTTGGCACTATCTATATATGAGAGGTGTTTGGGTAGATACAGGAACGTCTCCAACCGTATTTAGATACATTGACTGGTTGTTAACTGTTCCATTGTTAATTGTAGAGTTCTATTTAATTCTTAGAGCCGTAACAGATGTTGCCGCTTCATTGTTCTACAAATTATTTTTAGGATCATTGGTAATGTTAGTCTTTGGCTATATGGGTGAAGCGGGAATAATGGCCGCTATGCCTGCATTTATTATTGGGTGTCTTGCTTGGTTCTACATGATCCATACCTTATGGGCTGGTGAAGGCGCACAAGCAAAAAATGCATCTGGTAATGCTGCTGTCCAAACTGCATACAACACCATGATGTGGATTATTATTGTTGGTTGGGCTGTTTATCCTGTTGGTTATTTCATGGGATATTTAGCAGGTGGAGTAGATGAAGGAGCTTTAAACCTAATCTATAACTTAGCTGACTTTATTAACAAAATCCTATTCGGTATTGTTATTTGGTCTGCTGCTGTTAGCGACTCAAATAAA LSMGESILLIKKEYQMKLLMLLAGVMAVPTFAAGDLDPNDYVGVSFWLVTAALLAATVFFFLERDNVSAKWRTSLTVSGLVTGIALWHYLYMRGVWVDTGTSPTVFRYIDWLLTVPLLIVEFYLILRAVTDVAASLFYKLFLGSLVMLVFGYMGEAGIMAAMPAFIIGCLAWFYMIHTLWAGEGAQAKNASGNAAVQTAYNTMMWIIIVGWAVYPVGYFMGYLAGGVDEGALNLIYNLADFINKILFGIVIWSAAVSDSNK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATGGGGGAGAGTATTTTATTAATAAAAAAGGAGTATCAAATGAAATTACTTATGCTTTTAGCTGGTGTAATGGCTGTTCCTACTTTTGCTGCT------------GGAGACCTTGATCCTAATGATTATGTTGGGGTTTCTTTCTGGCTTGTTACTGCAGCTTTGCTTGCAGCAACAGTTTTCTTCTTTCTTGAAAGAGATAATGTAAGCGCA---AAATGGAGAACTTCGTTAACTGTATCAGGTTTGGTTACTGGTATCGCACTTTGGCACTATCTATATATGAGAGGTGTTTGGGTA---------------------------------------------------GATACAGGAACGTCTCCAACCGTATTTAGATACATTGACTGG------------------------TTGTTAACTGTTCCATTGTTAATTGTAGAGTTCTATTTAATTCTTAGAGCC---------GTA---ACAGATGTTGCCGCT---TCATTG------------------------------------TTCTACAAA---TTATTTTTAGGATCATTGGTAATGTTAGTCTTTGGCTATATGGGTGAA---------GCG------------------GGA------ATA---------------------------------ATG------------------------------------------------------------------GCCGCT------------------ATGCCTGCA---TTTATTATTGGGTGTCTTGCTTGGTTCTACATGATCCATACCTTA---------------TGG------GCT---GGTGAAGGCGCACAAGCAAAAAATGCA------TCT---GGTAATGCTGCTGTC---CAA---ACT---GCA---TAC---AAC---ACCATG---ATGTGGATTATTATTGTT---------------------------------------------------------------GGTTGG---------GCTGTTTATCCTGTTGGTTATTTCATGGGATATTTA---------------------------------------GCAGGTGGAGTAGATGAAGGAGCTTTAAACCTAATCTATAACTTAGCTGACTTTATTAACAAAATCCTATTCGGTATTGTTATTTGGTCTGCTGCTGTTAGCGACTCAAATAAA--------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------LSMGESILLIKKEYQMKLLMLLAGVMAVPTFAA----GDLDPNDYVGVSFWLVTAALLAATVFFFLERDNVSA-KWRTSLTVSGLVTGIALWHYLYMRGVWV-----------------DTGTSPTVFRYIDW--------LLTVPLLIVEFYLILRA---V-TDVAA-SL------------FYK-LFLGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------MPA-FIIGCLAWFYMIHTL-----W--A-GEGAQAKNA--S-GNAAV-Q-T-A-Y-N-TM-MWIIIV---------------------GW---AVYPVGYFMGYL-------------AGGVDEGALNLIYNLADFINKILFGIVIWSAAVSDSNK--------------------------------------- [IV-Gamma5-SAR86e]_1105089720622 [IV-Gamma5-SAR86e] JCVI_ORF_1105089720622_GS027_Coastal_3m jcvi|1105089720622| 1105089720622 JCVI ORF 1105089720622 1105089720622 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 04-FEB-2004 Coastal/3m_depth/S_34.9_psu/GS027/Devils_Crown/Floreana_Island/Galapagos_Islands Pacific Ocean marine -1.2161111 -90.422775 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATATTTAAATTAAATAAGGAGATCAGTATGAAGTTATTTATGCTACTTGCAGGCGTGATTGCTGTTCCTTCATTTGCTGCCGCTGGAGGCGATTTAGATGCTAGCGATTACGTTGGTGTCAGCTTCTGGTTAGTAACAGCTGCTTTGTTAGCTGCTACTGTATTCTTTTTCTTAGAAAGAGATAACGTCAGCTCAAAATGGAGAACATCTCTAACAGTGTCTGGTTTGGTAACAGGTATTGCTTTATGGCATTACTTGTATATGAGAGGCGTATGGGTTGAAACTGGCACATCACCAACTGTATTTCGATACATTGACTGGTTGCTAACTGTACCTCTTCTCATTGTAGAGTTCTATTTGATCCTAAGAGCTGTTACTGACGTTGCTGCTTCACTATTCTGGAAGCTGTTTGTTGGTTCACTCGTTATGTTGATCTTTGGATATCTTGGAGAAGCTGGAATCATGGCAGCCTGGCCTGCATTCATTATTGGGTGTTTAGCTTGGTTCTACATGATTTATACCCTGTGGGGCGGAGAAGGAGCTGCTGCTAGAGACGCGTCTGGTAATGCTGCTGTTCAAAGCGCTTACAACACCATGATGTATATCATCATCATTGGTTGGGTTGTTTATCCTGCAGGATACTTCCTAGGTTATTTAGCTGGTGGTGTAAACGAAGGTACTTTAAACCTCGTATACAACCTTGCAGACTTTATTAACAAAATCCTATTCGGTATTGTTATTTGGGCTGCTGCTGTTAGCGATAATAAC IFKLNKEISMKLFMLLAGVIAVPSFAAAGGDLDASDYVGVSFWLVTAALLAATVFFFLERDNVSSKWRTSLTVSGLVTGIALWHYLYMRGVWVETGTSPTVFRYIDWLLTVPLLIVEFYLILRAVTDVAASLFWKLFVGSLVMLIFGYLGEAGIMAAWPAFIIGCLAWFYMIYTLWGGEGAAARDASGNAAVQSAYNTMMYIIIIGWVVYPAGYFLGYLAGGVNEGTLNLVYNLADFINKILFGIVIWAAAVSDNN ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTTAAATTAAATAAGGAGATCAGTATGAAGTTATTTATGCTACTTGCAGGCGTGATTGCTGTTCCTTCATTTGCTGCC------GCTGGAGGCGATTTAGATGCTAGCGATTACGTTGGTGTCAGCTTCTGGTTAGTAACAGCTGCTTTGTTAGCTGCTACTGTATTCTTTTTCTTAGAAAGAGATAACGTCAGCTCA---AAATGGAGAACATCTCTAACAGTGTCTGGTTTGGTAACAGGTATTGCTTTATGGCATTACTTGTATATGAGAGGCGTATGGGTT---------------------------------------------------GAAACTGGCACATCACCAACTGTATTTCGATACATTGACTGG------------------------TTGCTAACTGTACCTCTTCTCATTGTAGAGTTCTATTTGATCCTAAGAGCT---------GTT---ACTGACGTTGCTGCT---TCACTA------------------------------------TTCTGGAAG---CTGTTTGTTGGTTCACTCGTTATGTTGATCTTTGGATATCTTGGAGAA---------GCT------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCAGCC------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGTTCTACATGATTTATACCCTG---------------TGG------GGC---GGAGAAGGAGCTGCTGCTAGAGACGCG------TCT---GGTAATGCTGCTGTT---CAA---AGC---GCT---TAC---AAC---ACCATG---ATGTATATCATCATCATT---------------------------------------------------------------GGTTGG---------GTTGTTTATCCTGCAGGATACTTCCTAGGTTATTTA---------------------------------------GCTGGTGGTGTAAACGAAGGTACTTTAAACCTCGTATACAACCTTGCAGACTTTATTAACAAAATCCTATTCGGTATTGTTATTTGGGCTGCTGCTGTTAGCGATAATAAC------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------IFKLNKEISMKLFMLLAGVIAVPSFAA--AGGDLDASDYVGVSFWLVTAALLAATVFFFLERDNVSS-KWRTSLTVSGLVTGIALWHYLYMRGVWV-----------------ETGTSPTVFRYIDW--------LLTVPLLIVEFYLILRA---V-TDVAA-SL------------FWK-LFVGSLVMLIFGYLGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWFYMIYTL-----W--G-GEGAAARDA--S-GNAAV-Q-S-A-Y-N-TM-MYIIII---------------------GW---VVYPAGYFLGYL-------------AGGVNEGTLNLVYNLADFINKILFGIVIWAAAVSDNN---------------------------------------- [IV-Gamma5-SAR86e]_1105102452070 [IV-Gamma5-SAR86e] JCVI_ORF_1105102452070_GS012_Estuary_14m jcvi|1105102452070| 1105102452070 JCVI ORF 1105102452070 1105102452070 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 18-DEC-2003 Estuary/14m_depth/S_3.5_psu/GS012/Chesapeake_Bay/MD/North_American_East_Coast Atlantic Ocean marine 38.946945 -76.41722 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAATTACTTATGCTTTTAGCCGGGGTAATGAGTGTTCCTGCATTTGCGGCCGGTGGAGATCTTGATGCCAACGATTACGTTGGGGTTTCGTTCTGGTTGGTTACTGCTGCATTGCTAGCTGCAACAGTTTTCTTTTTCTTAGAAAGAGATAACGTTAACGCAAAATGGAGAACTTCATTAACTGTATCAGGCTTGGTGACAGGTATTGCATTATGGCATTATCTATACATGCGAGGAGTTTGGGTTGACACAGGAACCTCTCCAACCGTATTTAGATATATTGACTGGTTGCTAACAGTGCCATTGTTAATTGTAGAATTCTACCTAATACTTAAGGCTGTAACGGATGTTGCTGCTTCATTATTCTATAAATTGTTCTTAGGTTCCTTGGTAATGCTTATCTTTGGTTACTTAGGTGAAGCTGGGATAATGGCTGCCCTTCCTGCATTTATTATTGGATGCTTGGCATGGTTCTATATGATTTATGAGCTTTGGGCTGGTGAAGGTGCTTCTGCTAAGAATGCTTCTGGAAACGCCGCGGTTCAAACAGCTTACAACACAATGATGTGGATTATCATTATTGGTTGGGCTGTATATCCATTAGGTTATTACTTTGGATATCTAGCAGGTGGAGTAAATGAAGGTTCTCTAAACCTTATTTATAACCTTGCTGACTTCATAAATAAAATCTTGTTTGGTATTGTTATTTGGGCTGCTGCTGTCAGTGATTCAAATAAA MKLLMLLAGVMSVPAFAAGGDLDANDYVGVSFWLVTAALLAATVFFFLERDNVNAKWRTSLTVSGLVTGIALWHYLYMRGVWVDTGTSPTVFRYIDWLLTVPLLIVEFYLILKAVTDVAASLFYKLFLGSLVMLIFGYLGEAGIMAALPAFIIGCLAWFYMIYELWAGEGASAKNASGNAAVQTAYNTMMWIIIIGWAVYPLGYYFGYLAGGVNEGSLNLIYNLADFINKILFGIVIWAAAVSDSNK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAATTACTTATGCTTTTAGCCGGGGTAATGAGTGTTCCTGCATTTGCGGCC---------GGTGGAGATCTTGATGCCAACGATTACGTTGGGGTTTCGTTCTGGTTGGTTACTGCTGCATTGCTAGCTGCAACAGTTTTCTTTTTCTTAGAAAGAGATAACGTTAACGCA---AAATGGAGAACTTCATTAACTGTATCAGGCTTGGTGACAGGTATTGCATTATGGCATTATCTATACATGCGAGGAGTTTGGGTT---------------------------------------------------GACACAGGAACCTCTCCAACCGTATTTAGATATATTGACTGG------------------------TTGCTAACAGTGCCATTGTTAATTGTAGAATTCTACCTAATACTTAAGGCT---------GTA---ACGGATGTTGCTGCT---TCATTA------------------------------------TTCTATAAA---TTGTTCTTAGGTTCCTTGGTAATGCTTATCTTTGGTTACTTAGGTGAA---------GCT------------------GGG------ATA---------------------------------ATG------------------------------------------------------------------GCTGCC------------------CTTCCTGCA---TTTATTATTGGATGCTTGGCATGGTTCTATATGATTTATGAGCTT---------------TGG------GCT---GGTGAAGGTGCTTCTGCTAAGAATGCT------TCT---GGAAACGCCGCGGTT---CAA---ACA---GCT---TAC---AAC---ACAATG---ATGTGGATTATCATTATT---------------------------------------------------------------GGTTGG---------GCTGTATATCCATTAGGTTATTACTTTGGATATCTA---------------------------------------GCAGGTGGAGTAAATGAAGGTTCTCTAAACCTTATTTATAACCTTGCTGACTTCATAAATAAAATCTTGTTTGGTATTGTTATTTGGGCTGCTGCTGTCAGTGATTCAAATAAA--------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------MKLLMLLAGVMSVPAFAA---GGDLDANDYVGVSFWLVTAALLAATVFFFLERDNVNA-KWRTSLTVSGLVTGIALWHYLYMRGVWV-----------------DTGTSPTVFRYIDW--------LLTVPLLIVEFYLILKA---V-TDVAA-SL------------FYK-LFLGSLVMLIFGYLGE---A------G--I-----------M----------------------AA------LPA-FIIGCLAWFYMIYEL-----W--A-GEGASAKNA--S-GNAAV-Q-T-A-Y-N-TM-MWIIII---------------------GW---AVYPLGYYFGYL-------------AGGVNEGSLNLIYNLADFINKILFGIVIWAAAVSDSNK--------------------------------------- [IV-Gamma5-SAR86a]_DQ422182 [IV-Gamma5-SAR86a] clone_med-0m-c7_DQ422182 gi|90023884|gb|DQ422182| Uncultured bacterium clone med-0m-c7 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-c7 putative proteorhodopsin gene, partial cds. DQ422182 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTGTGTACGAATGTTAGTTCAGGTTTATTCTGGAGACTATTAGTAGCATCACTTGTTATGCTTGTTGGTGGTTTCATAGGAGAAACTGGCGGCAATGCGATGGTATGCGGTGTTATAGCTACTGCAGCTTGGTTATATATTATCTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCTGCAGCACAAAGTGCTTTCGGTACAATTAGATTAATTGTTACCGTTGGTTGGGCTATTTATCCA RYIDWLITVPLQIIEFYLILKVCTNVSSGLFWRLLVASLVMLVGGFIGETGGNAMVCGVIATAAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTG---------TGT---ACGAATGTTAGTTCA---GGTTTA------------------------------------TTCTGGAGA---CTATTAGTAGCATCACTTGTTATGCTTGTTGGTGGTTTCATAGGAGAA---------ACT------------------GGC------GGC------------------------------------------------------------------------------------------------------AATGCG------------------ATGGTATGC---GGTGTTATAGCTACTGCAGCTTGGTTATATATTATCTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCTGCAGCA---CAA---AGT---GCT---TTC---GGT---ACAATT---AGATTAATTGTTACCGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWR-LLVASLVMLVGGFIGE---T------G--G----------------------------------NA------MVC-GVIATAAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ422646 [IV-Gamma5-SAR86a] clone_med-tb04-20m-b11_DQ422646 gi|90024812|gb|DQ422646| Uncultured bacterium clone med-tb04-20m-b11 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-b11 putative proteorhodopsin gene, partial cds. DQ422646 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTGTGTACGAATGTTAGTTCAGGTTTATTCTGGAGACTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATAGGAGAAACTGGTGGCAATGCGATGGTATGCGGTGTTATAGCTACTGCAGCTTGGTTATACATTATCTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCTGCAGCACAAAGTGCTTTCGGTACAATTAGATTAATTGTTACTGTTGGTTGGGCTATTTACCCA RYIDWLITVPLQIIEFYLILKVCTNVSSGLFWRLLVASLVMLVGGFIGETGGNAMVCGVIATAAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTG---------TGT---ACGAATGTTAGTTCA---GGTTTA------------------------------------TTCTGGAGA---CTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATAGGAGAA---------ACT------------------GGT------GGC------------------------------------------------------------------------------------------------------AATGCG------------------ATGGTATGC---GGTGTTATAGCTACTGCAGCTTGGTTATACATTATCTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCTGCAGCA---CAA---AGT---GCT---TTC---GGT---ACAATT---AGATTAATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWR-LLVASLVMLVGGFIGE---T------G--G----------------------------------NA------MVC-GVIATAAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ422508 [IV-Gamma5-SAR86a] clone_med-tb04-50m-f11_DQ422508 gi|90024536|gb|DQ422508| Uncultured bacterium clone med-tb04-50m-f11 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-f11 putative proteorhodopsin gene, partial cds. DQ422508 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTGTGTACGAATGTTAGTTCAGGTTTATTCTGGAGACTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATAGGAGAAACTGGTGGCAATGCAATGGTATGCGGTGTTATAGCTACTGCAGCTTGGTTATACATTATCTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCTGCAGCACAAAGTGCTTTCGGTACAATTAGATTAATTGTTACCGTTGGTTGGGCTATTTACCCA RYIDWLITVPLQIIEFYLILKVCTNVSSGLFWRLLVASLVMLVGGFIGETGGNAMVCGVIATAAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTG---------TGT---ACGAATGTTAGTTCA---GGTTTA------------------------------------TTCTGGAGA---CTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATAGGAGAA---------ACT------------------GGT------GGC------------------------------------------------------------------------------------------------------AATGCA------------------ATGGTATGC---GGTGTTATAGCTACTGCAGCTTGGTTATACATTATCTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCTGCAGCA---CAA---AGT---GCT---TTC---GGT---ACAATT---AGATTAATTGTTACCGTT---------------------------------------------------------------GGTTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWR-LLVASLVMLVGGFIGE---T------G--G----------------------------------NA------MVC-GVIATAAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ422536 [IV-Gamma5-SAR86a] clone_med-tb04-50m-h4_DQ422536 gi|90024592|gb|DQ422536| Uncultured bacterium clone med-tb04-50m-h4 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-h4 putative proteorhodopsin gene, partial cds. DQ422536 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTGTGTACGAATGTTAGTTCAGGTTTATTCTGGAGACTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATAGGAGAAACTGGTGGCAATGCGATGGTATGCGGTGTTATAGCTACTGCAGCTTGGTTATACATTATCTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCTGCAGCACAAAGTGCTTTCGGTACAATTAGATTAATTGTTACCGTTGGTTGGGCTATTTATCCA RYIDWLITVPLQIIEFYLILKVCTNVSSGLFWRLLVASLVMLVGGFIGETGGNAMVCGVIATAAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTG---------TGT---ACGAATGTTAGTTCA---GGTTTA------------------------------------TTCTGGAGA---CTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATAGGAGAA---------ACT------------------GGT------GGC------------------------------------------------------------------------------------------------------AATGCG------------------ATGGTATGC---GGTGTTATAGCTACTGCAGCTTGGTTATACATTATCTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCTGCAGCA---CAA---AGT---GCT---TTC---GGT---ACAATT---AGATTAATTGTTACCGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWR-LLVASLVMLVGGFIGE---T------G--G----------------------------------NA------MVC-GVIATAAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ422470 [IV-Gamma5-SAR86a] clone_med-tb04-50m-c1_DQ422470 gi|90024460|gb|DQ422470| Uncultured bacterium clone med-tb04-50m-c1 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-c1 putative proteorhodopsin gene, partial cds. DQ422470 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATTCTTAAAGTGTGTACGAATGTTAGTTCAGGTTTATTCTGGAGACTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATAGGAGAAACTGGTGGCAATGCAATGGTATGCGGTGTTATAGCTACTGCAGCTTGGTTATACATTATCTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCTGCAGCACAAAGTGCTCTCGGTACAATTAGATTAATTGTTACCGTTGGTTGGGCTATTTATCCA RYIDWLITVPLQIIEFYLILKVCTNVSSGLFWRLLVASLVMLVGGFIGETGGNAMVCGVIATAAWLYIIYEVFSGEAGKLNASSGNAAAQSALGTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATTCTTAAAGTG---------TGT---ACGAATGTTAGTTCA---GGTTTA------------------------------------TTCTGGAGA---CTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATAGGAGAA---------ACT------------------GGT------GGC------------------------------------------------------------------------------------------------------AATGCA------------------ATGGTATGC---GGTGTTATAGCTACTGCAGCTTGGTTATACATTATCTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCTGCAGCA---CAA---AGT---GCT---CTC---GGT---ACAATT---AGATTAATTGTTACCGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWR-LLVASLVMLVGGFIGE---T------G--G----------------------------------NA------MVC-GVIATAAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-L-G-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ422485 [IV-Gamma5-SAR86a] clone_med-tb04-50m-d12_DQ422485 gi|90024490|gb|DQ422485| Uncultured bacterium clone med-tb04-50m-d12 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-d12 putative proteorhodopsin gene, partial cds. DQ422485 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATTCTTAAAGTGTGTACGAATGTTAGTTCAGGTTTATTCTGGAGACTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATAGGAGAAACTGGTGGCAATGCAATGGTATGCGGTGTTATAGCTACTGCAGCTTGGTTATACATTATCTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCTGCAGCACAAAGTGCTCTCGGTACAATTAGATTAATTGTTACCGTTGGTTGGGCTATTTATCCA RYIDWLITVPLQIIEFYLILKVCTNVSSGLFWRLLVASLVMLVGGFIGETGGNAMVCGVIATAAWLYIIYEVFSGEAGKLNASSGNAAAQSALGTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATTCTTAAAGTG---------TGT---ACGAATGTTAGTTCA---GGTTTA------------------------------------TTCTGGAGA---CTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATAGGAGAA---------ACT------------------GGT------GGC------------------------------------------------------------------------------------------------------AATGCA------------------ATGGTATGC---GGTGTTATAGCTACTGCAGCTTGGTTATACATTATCTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCTGCAGCA---CAA---AGT---GCT---CTC---GGT---ACAATT---AGATTAATTGTTACCGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWR-LLVASLVMLVGGFIGE---T------G--G----------------------------------NA------MVC-GVIATAAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-L-G-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ422219 [IV-Gamma5-SAR86a] clone_med-0m-g1_DQ422219 gi|90023958|gb|DQ422219| Uncultured bacterium clone med-0m-g1 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-g1 putative proteorhodopsin gene, partial cds. DQ422219 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTGTGTACGAATGTTAGTTCAGGTTTATTCTGGAGACTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATAGGAGAAACTGGTGGCAATGCAATGGTATGCGGTGTTATAGCTACTGCAGCTTGGTTATACATTATCTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCTGCAGCACAAAGTGCTTTCGGTACAATTAGATTAATTGTTACCGTTGGTTGGGCTATTTATCCA RYIDWLITVPLQIIEFYLILKVCTNVSSGLFWRLLVASLVMLVGGFIGETGGNAMVCGVIATAAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTG---------TGT---ACGAATGTTAGTTCA---GGTTTA------------------------------------TTCTGGAGA---CTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATAGGAGAA---------ACT------------------GGT------GGC------------------------------------------------------------------------------------------------------AATGCA------------------ATGGTATGC---GGTGTTATAGCTACTGCAGCTTGGTTATACATTATCTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCTGCAGCA---CAA---AGT---GCT---TTC---GGT---ACAATT---AGATTAATTGTTACCGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWR-LLVASLVMLVGGFIGE---T------G--G----------------------------------NA------MVC-GVIATAAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ422153 [IV-Gamma5-SAR86a] clone_med-0m-a12_DQ422153 gi|90023826|gb|DQ422153| Uncultured bacterium clone med-0m-a12 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-a12 putative proteorhodopsin gene, partial cds. DQ422153 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTGTGTACGAATGTTAGTTCAGGTTTATTCTGGAGACTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATAGGAGAAACTGGTGGCAATGCAATGGTATGCGGTGTTATAGCTACTGCAGCTTGGTTATACATTATCTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCTGCAGCACAAAGTGCTTTCGGTACAATTAGATTAATTGTTACCGTTGGTTGGGCTATATATCCA RYIDWLITVPLQIIEFYLILKVCTNVSSGLFWRLLVASLVMLVGGFIGETGGNAMVCGVIATAAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTG---------TGT---ACGAATGTTAGTTCA---GGTTTA------------------------------------TTCTGGAGA---CTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATAGGAGAA---------ACT------------------GGT------GGC------------------------------------------------------------------------------------------------------AATGCA------------------ATGGTATGC---GGTGTTATAGCTACTGCAGCTTGGTTATACATTATCTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCTGCAGCA---CAA---AGT---GCT---TTC---GGT---ACAATT---AGATTAATTGTTACCGTT---------------------------------------------------------------GGTTGG---------GCTATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWR-LLVASLVMLVGGFIGE---T------G--G----------------------------------NA------MVC-GVIATAAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ422194 [IV-Gamma5-SAR86a] clone_med-0m-d7_DQ422194 gi|90023908|gb|DQ422194| Uncultured bacterium clone med-0m-d7 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-d7 putative proteorhodopsin gene, partial cds. DQ422194 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTGTGTACGAATGTTAGTTCAGGTTTATTCTGGAGACTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATAGGAGAAACTGGTGGCAATGCGATGGTATGCGGTGTTATAGCTACTGCAGCTCGGTTATACATTATCTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCTGCAGCACAAAGTGCTTTCGGTACAATTAGATTAATTGTTACCGTTGGTTGGGCTATTTATCCA RYIDWLITVPLQIIEFYLILKVCTNVSSGLFWRLLVASLVMLVGGFIGETGGNAMVCGVIATAARLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTG---------TGT---ACGAATGTTAGTTCA---GGTTTA------------------------------------TTCTGGAGA---CTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATAGGAGAA---------ACT------------------GGT------GGC------------------------------------------------------------------------------------------------------AATGCG------------------ATGGTATGC---GGTGTTATAGCTACTGCAGCTCGGTTATACATTATCTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCTGCAGCA---CAA---AGT---GCT---TTC---GGT---ACAATT---AGATTAATTGTTACCGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWR-LLVASLVMLVGGFIGE---T------G--G----------------------------------NA------MVC-GVIATAARLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ422506 [IV-Gamma5-SAR86a] clone_med-tb04-50m-f1_DQ422506 gi|90024532|gb|DQ422506| Uncultured bacterium clone med-tb04-50m-f1 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-f1 putative proteorhodopsin gene, partial cds. DQ422506 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTGTGTACGAATGTTAGTTCAGGTTTATTCTGGAGACTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATAGGAGAAACTGGTGGCAATGCGATGGTATGCGGTGTTATAGCTACTGCAGCTTGGTTATACATTATCTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCTGCAGCACAAAGTGCTTTCGGTACAATTAGATTAATTGTTACCGTTGGTTGGGCTATTTATCCA RYIDWLITVPLQIIEFYLILKVCTNVSSGLFWRLLVASLVMLVGGFIGETGGNAMVCGVIATAAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTG---------TGT---ACGAATGTTAGTTCA---GGTTTA------------------------------------TTCTGGAGA---CTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATAGGAGAA---------ACT------------------GGT------GGC------------------------------------------------------------------------------------------------------AATGCG------------------ATGGTATGC---GGTGTTATAGCTACTGCAGCTTGGTTATACATTATCTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCTGCAGCA---CAA---AGT---GCT---TTC---GGT---ACAATT---AGATTAATTGTTACCGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWR-LLVASLVMLVGGFIGE---T------G--G----------------------------------NA------MVC-GVIATAAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ422342 [IV-Gamma5-SAR86a] clone_med-20m-h7_DQ422342 gi|90024204|gb|DQ422342| Uncultured bacterium clone med-20m-h7 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-h7 putative proteorhodopsin gene, partial cds. DQ422342 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTGTGTACGAATGTTAGTTCAGGTTTATTCTGGAGACTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATAGGAGAAACTGGTGGCAATGCGATGGTATGCGGTGTTATAGCTACTGCAGCTTGGTTATACATTATCTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCTGCAGCACAAAGTGCTTTCGGTACAATTAGATTAATTGTTACCGTTGGTTGGGCTATTTATCCA RYIDWLITVPLQIIEFYLILKVCTNVSSGLFWRLLVASLVMLVGGFIGETGGNAMVCGVIATAAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTG---------TGT---ACGAATGTTAGTTCA---GGTTTA------------------------------------TTCTGGAGA---CTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATAGGAGAA---------ACT------------------GGT------GGC------------------------------------------------------------------------------------------------------AATGCG------------------ATGGTATGC---GGTGTTATAGCTACTGCAGCTTGGTTATACATTATCTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCTGCAGCA---CAA---AGT---GCT---TTC---GGT---ACAATT---AGATTAATTGTTACCGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWR-LLVASLVMLVGGFIGE---T------G--G----------------------------------NA------MVC-GVIATAAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ422716 [IV-Gamma5-SAR86a] clone_med-tb04-20m-h1_DQ422716 gi|90024952|gb|DQ422716| Uncultured bacterium clone med-tb04-20m-h1 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-h1 putative proteorhodopsin gene, partial cds. DQ422716 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATTGACTGGCTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTGTGTACGAATGTTAGTTCAGGTTTATTCTGGAGACTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATAGGAGAAACTGGTGGCAATGCAATGGTATGCGGTGTTATAGCTGCTGCAGCTTGGTTATACATTATCTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCCTCAAGTGGTAATGCTGCAGCACAAAGTGCTTTCGGTACAATTAGATTAATTGTTACCA RYIDWLITVPLQIIEFYLILKVCTNVSSGLFWRLLVASLVMLVGGFIGETGGNAMVCGVIAAAAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTG---------TGT---ACGAATGTTAGTTCA---GGTTTA------------------------------------TTCTGGAGA---CTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATAGGAGAA---------ACT------------------GGT------GGC------------------------------------------------------------------------------------------------------AATGCA------------------ATGGTATGC---GGTGTTATAGCTGCTGCAGCTTGGTTATACATTATCTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCCTCA------AGT---GGTAATGCTGCAGCA---CAA---AGT---GCT---TTC---GGT---ACAATT---AGATTAATTGTTACC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWR-LLVASLVMLVGGFIGE---T------G--G----------------------------------NA------MVC-GVIAAAAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVT--------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ203684 [IV-Gamma5-SAR86a] medHO155C3_env_samples_DQ203684 gi|77547816|gb|DQ203684| Uncultured bacterium clone medHO155C3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155C3 predicted proteorhodopsin gene, partial cds DQ203684 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTGTGTACGAATGTTAGTTCAGGTTTATTCTGGAGACTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATAGGAGAAACTGGTGGCAATGCAATGGTATGCGGTGTTATAGCTACTGCAGCTTGGTTATACATTATCTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCTGCAGCACAAAGTGCTTTCGGTACAATTAGATTAATTGTTACCGTTGGTTGGGCAATCTATCCA RYIDWLITVPLQIIEFYLILKVCTNVSSGLFWRLLVASLVMLVGGFIGETGGNAMVCGVIATAAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTG---------TGT---ACGAATGTTAGTTCA---GGTTTA------------------------------------TTCTGGAGA---CTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATAGGAGAA---------ACT------------------GGT------GGC------------------------------------------------------------------------------------------------------AATGCA------------------ATGGTATGC---GGTGTTATAGCTACTGCAGCTTGGTTATACATTATCTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCTGCAGCA---CAA---AGT---GCT---TTC---GGT---ACAATT---AGATTAATTGTTACCGTT---------------------------------------------------------------GGTTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWR-LLVASLVMLVGGFIGE---T------G--G----------------------------------NA------MVC-GVIATAAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ203627 [IV-Gamma5-SAR86a] medHO120E5_env_samples_DQ203627 gi|77547702|gb|DQ203627| Uncultured bacterium clone medHO120E5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120E5 predicted proteorhodopsin gene, partial cds DQ203627 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATAGACTGGCTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTGTGTACGAATGTTAGTTCAGGTTTATTCTGGAGACTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATAGGAGAAGCTGGTGGCAATGCGATGGTATGCGGTGTTATAGCTACTGCAGCTTGGTTATACATTATCTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCTGCAGCACAAAGTGCTTTCGGTACAATTAGATTAATTGTTACCGTTGGTTGGGCCATCTATCCA RYIDWLITVPLQIIEFYLILKVCTNVSSGLFWRLLVASLVMLVGGFIGEAGGNAMVCGVIATAAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTG---------TGT---ACGAATGTTAGTTCA---GGTTTA------------------------------------TTCTGGAGA---CTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATAGGAGAA---------GCT------------------GGT------GGC------------------------------------------------------------------------------------------------------AATGCG------------------ATGGTATGC---GGTGTTATAGCTACTGCAGCTTGGTTATACATTATCTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCTGCAGCA---CAA---AGT---GCT---TTC---GGT---ACAATT---AGATTAATTGTTACCGTT---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWR-LLVASLVMLVGGFIGE---A------G--G----------------------------------NA------MVC-GVIATAAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ203715 [IV-Gamma5-SAR86a] medHO155F6_env_samples_DQ203715 gi|77547878|gb|DQ203715| Uncultured bacterium clone medHO155F6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155F6 predicted proteorhodopsin gene, partial cds DQ203715 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTGTGTACGAATGTTAGTTCAGGTTTATTCTGGAGACTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATAGGAGAAACTGGTGGCAATGCGATGGTATGCGGTGTTATAGCTACTGCAGCTTGGTTATACATTATCTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCTGCAGCACAAAGTGCTTTCGGTACAATTAGATTAATTGTTACCGTTGGTTGGGCCATCTATCCA RYIDWLITVPLQIIEFYLILKVCTNVSSGLFWRLLVASLVMLVGGFIGETGGNAMVCGVIATAAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTG---------TGT---ACGAATGTTAGTTCA---GGTTTA------------------------------------TTCTGGAGA---CTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATAGGAGAA---------ACT------------------GGT------GGC------------------------------------------------------------------------------------------------------AATGCG------------------ATGGTATGC---GGTGTTATAGCTACTGCAGCTTGGTTATACATTATCTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCTGCAGCA---CAA---AGT---GCT---TTC---GGT---ACAATT---AGATTAATTGTTACCGTT---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWR-LLVASLVMLVGGFIGE---T------G--G----------------------------------NA------MVC-GVIATAAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ203513 [IV-Gamma5-SAR86a] MedHO1202B8_env_samples_DQ203513 gi|77547474|gb|DQ203513| Uncultured bacterium clone MedHO1202B8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202B8 predicted proteorhodopsin gene, partial cds DQ203513 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGCTACATTGATTGGCTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTGTGTACGAATGTTAGTTCAGGTTTATTCTGGAGACTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATAGGAGAAACTGGTGGCAATGCGATGGTATGCGGTGTTATAGCTACTGCAGCTTGGTTATACATTATCTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCTGCAGCACAAAGTGCTTTCGGTACAATTAGATTAATTGTTACTGTTGGTTGGGCAATCTACCCA RYIDWLITVPLQIIEFYLILKVCTNVSSGLFWRLLVASLVMLVGGFIGETGGNAMVCGVIATAAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTACATTGATTGG------------------------CTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTG---------TGT---ACGAATGTTAGTTCA---GGTTTA------------------------------------TTCTGGAGA---CTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATAGGAGAA---------ACT------------------GGT------GGC------------------------------------------------------------------------------------------------------AATGCG------------------ATGGTATGC---GGTGTTATAGCTACTGCAGCTTGGTTATACATTATCTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCTGCAGCA---CAA---AGT---GCT---TTC---GGT---ACAATT---AGATTAATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWR-LLVASLVMLVGGFIGE---T------G--G----------------------------------NA------MVC-GVIATAAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ203664 [IV-Gamma5-SAR86a] medHO155A2_env_samples_DQ203664 gi|77547776|gb|DQ203664| Uncultured bacterium clone medHO155A2 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155A2 predicted proteorhodopsin gene, partial cds DQ203664 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGGTACATTGATTGGCTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTGTGTACGAATGTTAGTTCAGGTTTATTCTGGAGACTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATAGGAGAAACTGGTGGCAATGCGATGGTATGCGGTGTTATAGCTACTGCAGCTTGGTTATACATTATCTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCTGCAGCACAAAGTGCTTTCGGTACAATTAGATTAATTGTTACTGTTGGTTGGGCCATTTATCCA RYIDWLITVPLQIIEFYLILKVCTNVSSGLFWRLLVASLVMLVGGFIGETGGNAMVCGVIATAAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTACATTGATTGG------------------------CTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTG---------TGT---ACGAATGTTAGTTCA---GGTTTA------------------------------------TTCTGGAGA---CTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATAGGAGAA---------ACT------------------GGT------GGC------------------------------------------------------------------------------------------------------AATGCG------------------ATGGTATGC---GGTGTTATAGCTACTGCAGCTTGGTTATACATTATCTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCTGCAGCA---CAA---AGT---GCT---TTC---GGT---ACAATT---AGATTAATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWR-LLVASLVMLVGGFIGE---T------G--G----------------------------------NA------MVC-GVIATAAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ339271 [IV-Gamma5-SAR86a] clone_S-S80M-C10_DQ339271 gi|85681517|gb|DQ339271| Uncultured bacterium clone S-S80M-C10 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-C10 predicted proteorhodopsin gene, partial cds. DQ339271 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTGTGTACGAATGTTAGTTCAGGTTTATTCTGGAGACTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATAGGAGAAACTGGTGGCAATGCGATGGTATGCGGTGTTATAGCTACTGCAGCTTGGTTATACATTATCTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCTGCAGCACAAAGTGCTTTCGGTACAATTAGATTAATTGTTACTGTTGGTTGGGCCATTTATCCA RYIDWLITVPLQIIEFYLILKVCTNVSSGLFWRLLVASLVMLVGGFIGETGGNAMVCGVIATAAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTG---------TGT---ACGAATGTTAGTTCA---GGTTTA------------------------------------TTCTGGAGA---CTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATAGGAGAA---------ACT------------------GGT------GGC------------------------------------------------------------------------------------------------------AATGCG------------------ATGGTATGC---GGTGTTATAGCTACTGCAGCTTGGTTATACATTATCTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCTGCAGCA---CAA---AGT---GCT---TTC---GGT---ACAATT---AGATTAATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWR-LLVASLVMLVGGFIGE---T------G--G----------------------------------NA------MVC-GVIATAAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ339353 [IV-Gamma5-SAR86a] clone_S-S4OM-B9_DQ339353 gi|85681677|gb|DQ339353| Uncultured bacterium clone S-S4OM-B9 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-B9 predicted proteorhodopsin gene, partial cds. DQ339353 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTGTGTACAAATGTTAGTTCAGGTTTATTCTGGAGACTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATAGGAGAGACTGGTGGCAATGCGATGGTATGCGGTGTTATAGCTACTGCAGCTTGGTTATACATTATCTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCTGCAGCACAAAGTGCTTTCGGTACAATTAGATTAATTGTTACTGTTGGGTGGGCCATCTATCCA RYIDWLITVPLQIIEFYLILKVCTNVSSGLFWRLLVASLVMLVGGFIGETGGNAMVCGVIATAAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTG---------TGT---ACAAATGTTAGTTCA---GGTTTA------------------------------------TTCTGGAGA---CTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATAGGAGAG---------ACT------------------GGT------GGC------------------------------------------------------------------------------------------------------AATGCG------------------ATGGTATGC---GGTGTTATAGCTACTGCAGCTTGGTTATACATTATCTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCTGCAGCA---CAA---AGT---GCT---TTC---GGT---ACAATT---AGATTAATTGTTACTGTT---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWR-LLVASLVMLVGGFIGE---T------G--G----------------------------------NA------MVC-GVIATAAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ339317 [IV-Gamma5-SAR86a] clone_S-S80M-G2_DQ339317 gi|85681607|gb|DQ339317| Uncultured bacterium clone S-S80M-G2 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-G2 predicted proteorhodopsin gene, partial cds. DQ339317 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTGTGTACAAATGTTAGCTCAGGTTTATTCTGGAGACTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATAGGAGAAACTGGTGGCAATGCGATGGTATGCGGTGTTATAGCTACTGCAGCTTGGTTATACATTATCTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCTGCAGCACAAAGTGCTTTCGGTACAATTAGATTAATTGTTACTGTTGGGTGGGCCATCTATCCA RYIDWLITVPLQIIEFYLILKVCTNVSSGLFWRLLVASLVMLVGGFIGETGGNAMVCGVIATAAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTG---------TGT---ACAAATGTTAGCTCA---GGTTTA------------------------------------TTCTGGAGA---CTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATAGGAGAA---------ACT------------------GGT------GGC------------------------------------------------------------------------------------------------------AATGCG------------------ATGGTATGC---GGTGTTATAGCTACTGCAGCTTGGTTATACATTATCTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCTGCAGCA---CAA---AGT---GCT---TTC---GGT---ACAATT---AGATTAATTGTTACTGTT---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWR-LLVASLVMLVGGFIGE---T------G--G----------------------------------NA------MVC-GVIATAAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ203787 [IV-Gamma5-SAR86a] SS114a0G9_env_samples_DQ203787 gi|77548022|gb|DQ203787| Uncultured bacterium clone SS114a0G9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0G9 predicted proteorhodopsin gene, partial cds DQ203787 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGACTGGCTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTGTGTACGAATGTTAGTTCAGGTTTATTCTGGAGACTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATAGGAGAAACTGGTGGTAATGCGATGGTATGCGGTGTTATAGCTACTGCAGCTTGGTTATACATTATCTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCTGCAGCACAAAGTGCTTTCGGTACAATTAGATTAATTGTTACTGTTGGTTGGGCCATCTATCCA RYIDWLITVPLQIIEFYLILKVCTNVSSGLFWRLLVASLVMLVGGFIGETGGNAMVCGVIATAAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGACTGG------------------------CTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTG---------TGT---ACGAATGTTAGTTCA---GGTTTA------------------------------------TTCTGGAGA---CTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATAGGAGAA---------ACT------------------GGT------GGT------------------------------------------------------------------------------------------------------AATGCG------------------ATGGTATGC---GGTGTTATAGCTACTGCAGCTTGGTTATACATTATCTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCTGCAGCA---CAA---AGT---GCT---TTC---GGT---ACAATT---AGATTAATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWR-LLVASLVMLVGGFIGE---T------G--G----------------------------------NA------MVC-GVIATAAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_KJ926133 [IV-Gamma5-SAR86a] BOUM_OTU046_env_samples gb|KJ926133| Uncultured bacterium clone BOUM OTU046 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU046 putative proteorhodopsin gene, partial cds KJ926133 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 39.0995 5.3403333 #na #na #na #na #na GTTGACTGGCTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTGTGTACGAATGTTAGTTCAGGTTTATTCTGGAGACTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATAGGAGAAACTGGTGGCAATGCGATGGTATGCGGTGTTATAGCTACTGCAGCTTGGTTATACATTATCTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCTGCAGCACAAAGTGCTTTCGGTACAATTAGATTAATTGTTACTGTTGGCTGGGCAATTTAT VDWLITVPLQIIEFYLILKVCTNVSSGLFWRLLVASLVMLVGGFIGETGGNAMVCGVIATAAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGACTGG------------------------CTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTG---------TGT---ACGAATGTTAGTTCA---GGTTTA------------------------------------TTCTGGAGA---CTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATAGGAGAA---------ACT------------------GGT------GGC------------------------------------------------------------------------------------------------------AATGCG------------------ATGGTATGC---GGTGTTATAGCTACTGCAGCTTGGTTATACATTATCTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCTGCAGCA---CAA---AGT---GCT---TTC---GGT---ACAATT---AGATTAATTGTTACTGTT---------------------------------------------------------------GGCTGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWR-LLVASLVMLVGGFIGE---T------G--G----------------------------------NA------MVC-GVIATAAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ422576 [IV-Gamma5-SAR86a] clone_med-tb04-0m-d1_DQ422576 gi|90024672|gb|DQ422576| Uncultured bacterium clone med-tb04-0m-d1 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-d1 putative proteorhodopsin gene, partial cds. DQ422576 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTGTGTACGAATGTTAGTTCAGGTTTATTCTGGAGACTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATGGGAGAAACTGGTGGCAATGCGATGGTATGCGGTGTTATAGCTACTGCAGCTTGGTTATACATTATCTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCTGCAGCACAAAGTGCTTTCGGTACAATTAGATTAATTGTTACTGTTGGTTGGGCTATTTATCCA RYIDWLITVPLQIIEFYLILKVCTNVSSGLFWRLLVASLVMLVGGFMGETGGNAMVCGVIATAAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTG---------TGT---ACGAATGTTAGTTCA---GGTTTA------------------------------------TTCTGGAGA---CTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATGGGAGAA---------ACT------------------GGT------GGC------------------------------------------------------------------------------------------------------AATGCG------------------ATGGTATGC---GGTGTTATAGCTACTGCAGCTTGGTTATACATTATCTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCTGCAGCA---CAA---AGT---GCT---TTC---GGT---ACAATT---AGATTAATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWR-LLVASLVMLVGGFMGE---T------G--G----------------------------------NA------MVC-GVIATAAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_1105078542543 [IV-Gamma5-SAR86a] JCVI_ORF_1105078542543_GS000b_Open_Ocean_5m jcvi|1105078542543| 1105078542543 JCVI ORF 1105078542543 1105078542543 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.22_0.8 other #na 26-FEB-2003 Open_Ocean/5m_depth/S_36.7_psu/GS000b/Sargasso_Station_11/Sargasso_Sea Sargasso Sea marine 31.175 -64.32433 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATTTTTATACTCCTAACTACTTATAAGGAGTTATATATGAAATTTTTATTAATGATGGTTGGTGCAGTTGCACTTCCAGCATTTGCTGCAGATTTGCAGACAAGTGACATGACAGGAGTATCATTCTGGCTGGTAACAGCCGCAATGCTTGCTGCTACTGTATTTTTCTTTGCAGAAAGAGACAGAGTTCATGGAAAATGGAAGACATCATTATCAGTAGCTGGTTTAGTTACTGGTGTGGCTGCCTGGCATTATCTCTACATGAGAGGTGTTTGGGTTGAGACTGGATCATCACCTACTGTATACAGATATATTGACTGGTTAATCACAGTCCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTGTGCACAAATGTAAGCTCTGGAGTTTTCTGGAGACTATTAGTAGCATCACTAGTAATGCTTATCTTTGGTTTCGTTGGTGAAACTGGTGGTAATGCAACAGTGATGGGTCTTATTGCAACAGTAGCTTGGTTATACATTATCTGGGAAGTGTTCTCTGGTGAAGCTGGACAACTTAATGCTTCTAGCGGTAATGCTGCAGCACAAAGCGCATTTAACACAATTAGATGGATCGTAACCGTCGGTTGGGCTATTTATCCTTTGGGATACTGGCTAGGCGCTATGGGTGGCGGAGATATGGCACAAGCTAACTTAATTTACAACCTTGCAGATTTTCTTAACAAAATTGCATTTGGTTTAGCTATTTATGTAGCTGCTGTAAGCGACTCAGAA IFILLTTYKELYMKFLLMMVGAVALPAFAADLQTSDMTGVSFWLVTAAMLAATVFFFAERDRVHGKWKTSLSVAGLVTGVAAWHYLYMRGVWVETGSSPTVYRYIDWLITVPLQIIEFYLILKVCTNVSSGVFWRLLVASLVMLIFGFVGETGGNATVMGLIATVAWLYIIWEVFSGEAGQLNASSGNAAAQSAFNTIRWIVTVGWAIYPLGYWLGAMGGGDMAQANLIYNLADFLNKIAFGLAIYVAAVSDSE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTTATACTCCTAACTACTTATAAGGAGTTATATATGAAATTTTTATTAATGATGGTTGGTGCAGTTGCACTTCCAGCATTTGCT---------GCAGATTTGCAGACAAGTGACATGACAGGAGTATCATTCTGGCTGGTAACAGCCGCAATGCTTGCTGCTACTGTATTTTTCTTTGCAGAAAGAGACAGAGTTCATGGA---AAATGGAAGACATCATTATCAGTAGCTGGTTTAGTTACTGGTGTGGCTGCCTGGCATTATCTCTACATGAGAGGTGTTTGGGTT------------------------------GAGACT---------------------GGATCATCACCTACTGTATACAGATATATTGACTGG------------------------TTAATCACAGTCCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTG---------TGC---ACAAATGTAAGCTCT---GGAGTT------------------------------------TTCTGGAGA---CTATTAGTAGCATCACTAGTAATGCTTATCTTTGGTTTCGTTGGTGAA---------ACT------------------GGT------GGT------------------------------------------------------------------------------------------------------AATGCA------------------ACAGTGATG---GGTCTTATTGCAACAGTAGCTTGGTTATACATTATCTGGGAAGTG---------------TTC------TCT---GGTGAAGCTGGACAACTTAATGCTTCT------AGC---GGTAATGCTGCAGCA---CAA---AGC---GCA---TTT---AAC---ACAATT---AGATGGATCGTAACCGTC---------------------------------------------------------------GGTTGG---------GCTATTTATCCTTTGGGATACTGGCTAGGCGCTATG---------------------------------------GGTGGCGGA---GATATGGCACAAGCTAACTTAATTTACAACCTTGCAGATTTTCTTAACAAAATTGCATTTGGTTTAGCTATTTATGTAGCTGCTGTAAGCGAC---TCAGAA--------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------IFILLTTYKELYMKFLLMMVGAVALPAFA---ADLQTSDMTGVSFWLVTAAMLAATVFFFAERDRVHG-KWKTSLSVAGLVTGVAAWHYLYMRGVWV----------ET-------GSSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GV------------FWR-LLVASLVMLIFGFVGE---T------G--G----------------------------------NA------TVM-GLIATVAWLYIIWEV-----F--S-GEAGQLNAS--S-GNAAA-Q-S-A-F-N-TI-RWIVTV---------------------GW---AIYPLGYWLGAM-------------GGG-DMAQANLIYNLADFLNKIAFGLAIYVAAVSD-SE--------------------------------------- [IV-Gamma5-SAR86a]_1105139930048 [IV-Gamma5-SAR86a] JCVI_ORF_1105139930048_GS017_Open_Ocean_2m jcvi|1105139930048| 1105139930048 JCVI ORF 1105139930048 1105139930048 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 09-janv-04 Open_Ocean/2m_depth/S_35.8_psu/GS017/Yucatan_Channel/Caribbean_Sea Caribbean Sea marine 20.5225 -85.41361 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATTATAGGTTCTTGTATATTAACGGGGGGGAGTATTTTTATACTCCTAACTACTTATAAGGAGTTATATATGAAATTTTTATTAATGATGGTTGGTGCAGTTGCACTTCCAGCATTTGCTGCAGATTTGCAGACAAGTGACATGACAGGAGTATCATTCTGGCTGGTAACAGCCGCAATGCTTGCTGCTACTGTATTTTTCTTTGCAGAAAGAGACAGAGTTCATGGAAAATGGAAGACATCATTATCAGTAGCTGGTTTAGTTACTGGTGTGGCTGCCTGGCATTATCTCTACATGAGAGGTGTTTGGGTTGAGACTGGATCATCACCTACTGTATACAGATATATTGACTGGTTAATCACAGTCCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTGTGCACAAATGTAAGCTCTGGAGTTTTCTGGAGACTATTAGTAGCATCACTAGTAATGCTTATCTTTGGTTTCGTTGGTGAAACTGGTGGTAATGCAACAGTGATGGGTCTTATTGCAACAGTAGCTTGGTTATACATTATCTGGGAAGTGTTCTCTGGTGAAGCTGGACAACTTAATGCTTCTAGCGGTAATGCTGCAGCACAAAGCGCATTTAACACAATTAGATGGATCGTAACCGTCGGTTGGGCTATTTATCCTTTGGGATACTGGCTAGGCGCTATGGGTGGCGGAGATATGGCACAAGCTAACTTAATTTACAACCTTGCAGATTTTCTTAACAAAATTGCATTTGGTTTAGCTATTTATGTAGCTGCTGTAAGCGACTCAGAA IIGSCILTGGSIFILLTTYKELYMKFLLMMVGAVALPAFAADLQTSDMTGVSFWLVTAAMLAATVFFFAERDRVHGKWKTSLSVAGLVTGVAAWHYLYMRGVWVETGSSPTVYRYIDWLITVPLQIIEFYLILKVCTNVSSGVFWRLLVASLVMLIFGFVGETGGNATVMGLIATVAWLYIIWEVFSGEAGQLNASSGNAAAQSAFNTIRWIVTVGWAIYPLGYWLGAMGGGDMAQANLIYNLADFLNKIAFGLAIYVAAVSDSE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTATAGGTTCTTGTATATTAACGGGGGGGAGTATTTTTATACTCCTAACTACTTATAAGGAGTTATATATGAAATTTTTATTAATGATGGTTGGTGCAGTTGCACTTCCAGCATTTGCT---------GCAGATTTGCAGACAAGTGACATGACAGGAGTATCATTCTGGCTGGTAACAGCCGCAATGCTTGCTGCTACTGTATTTTTCTTTGCAGAAAGAGACAGAGTTCATGGA---AAATGGAAGACATCATTATCAGTAGCTGGTTTAGTTACTGGTGTGGCTGCCTGGCATTATCTCTACATGAGAGGTGTTTGGGTT------------------------------GAGACT---------------------GGATCATCACCTACTGTATACAGATATATTGACTGG------------------------TTAATCACAGTCCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTG---------TGC---ACAAATGTAAGCTCT---GGAGTT------------------------------------TTCTGGAGA---CTATTAGTAGCATCACTAGTAATGCTTATCTTTGGTTTCGTTGGTGAA---------ACT------------------GGT------GGT------------------------------------------------------------------------------------------------------AATGCA------------------ACAGTGATG---GGTCTTATTGCAACAGTAGCTTGGTTATACATTATCTGGGAAGTG---------------TTC------TCT---GGTGAAGCTGGACAACTTAATGCTTCT------AGC---GGTAATGCTGCAGCA---CAA---AGC---GCA---TTT---AAC---ACAATT---AGATGGATCGTAACCGTC---------------------------------------------------------------GGTTGG---------GCTATTTATCCTTTGGGATACTGGCTAGGCGCTATG---------------------------------------GGTGGCGGA---GATATGGCACAAGCTAACTTAATTTACAACCTTGCAGATTTTCTTAACAAAATTGCATTTGGTTTAGCTATTTATGTAGCTGCTGTAAGCGAC---TCAGAA--------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------IIGSCILTGGSIFILLTTYKELYMKFLLMMVGAVALPAFA---ADLQTSDMTGVSFWLVTAAMLAATVFFFAERDRVHG-KWKTSLSVAGLVTGVAAWHYLYMRGVWV----------ET-------GSSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GV------------FWR-LLVASLVMLIFGFVGE---T------G--G----------------------------------NA------TVM-GLIATVAWLYIIWEV-----F--S-GEAGQLNAS--S-GNAAA-Q-S-A-F-N-TI-RWIVTV---------------------GW---AIYPLGYWLGAM-------------GGG-DMAQANLIYNLADFLNKIAFGLAIYVAAVSD-SE--------------------------------------- [IV-Gamma5-SAR86a]_1105083723433 [IV-Gamma5-SAR86a] JCVI_ORF_1105083723433_GS019_Coastal_2m jcvi|1105083723433| 1105083723433 JCVI ORF 1105083723433 1105083723433 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 12-janv-04 Coastal/2m_depth/S_35.4_psu/GS019/Northeast_of_Colon/Caribbean_Sea Caribbean Sea marine 10.716389 -80.25445 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TTGGTATATAGGTTCTTGTATATAACGGGGGGGAGTATTTTTATACTCCTAACTACTTATAAGGAGTTATATATGAAATTTTTATTAATGATGGTTGGTGCAGTTGCACTTCCAGCATTTGCTGCAGATTTGCAGACAAGTGACATGACAGGAGTATCATTCTGGCTGGTAACAGCCGCAATGCTTGCTGCTACTGTATTTTTCTTTGCAGAAAGAGACAGAGTTCATGGAAAATGGAAGACATCATTATCAGTAGCTGGTTTAGTTACTGGTGTGGCTGCCTGGCATTATCTCTACATGAGAGGTGTTTGGGTTGAGACTGGATCATCACCTACTGTATACAGATATATTGACTGGTTAATTACAGTCCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTGTGCACAAATGTAAGCTCTGGAGTTTTCTGGAGACTATTAGTAGCATCACTAGTAATGCTTATCTTTGGTTTCGTTGGTGAAACTGGTGGTAATGCAACAGTGATGGGTCTTATTGCAACAGTAGCTTGGTTATACATTATCTGGGAAGTGTTCTCTGGTGAAGCTGGACAACTTAATGCTTCTAGCGGTAATGCTGCAGCACAAAGCGCATTTAACACAATTAGATGGATCGTAACCGTCGGTTGGGCTATTTATCCTTTGGGATACTGGCTAGGCGCTATGGGTGGCGGAGATATGGCACAAGCTAACTTAATTTACAACCTTGCAGATTTTCTTAACAAAATTGCATTTGGTTTAGCTATTTATGTAGCTGCTGTAAGCGACTCAGAA LVYRFLYITGGSIFILLTTYKELYMKFLLMMVGAVALPAFAADLQTSDMTGVSFWLVTAAMLAATVFFFAERDRVHGKWKTSLSVAGLVTGVAAWHYLYMRGVWVETGSSPTVYRYIDWLITVPLQIIEFYLILKVCTNVSSGVFWRLLVASLVMLIFGFVGETGGNATVMGLIATVAWLYIIWEVFSGEAGQLNASSGNAAAQSAFNTIRWIVTVGWAIYPLGYWLGAMGGGDMAQANLIYNLADFLNKIAFGLAIYVAAVSDSE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGTATATAGGTTCTTGTATATAACGGGGGGGAGTATTTTTATACTCCTAACTACTTATAAGGAGTTATATATGAAATTTTTATTAATGATGGTTGGTGCAGTTGCACTTCCAGCATTTGCT---------GCAGATTTGCAGACAAGTGACATGACAGGAGTATCATTCTGGCTGGTAACAGCCGCAATGCTTGCTGCTACTGTATTTTTCTTTGCAGAAAGAGACAGAGTTCATGGA---AAATGGAAGACATCATTATCAGTAGCTGGTTTAGTTACTGGTGTGGCTGCCTGGCATTATCTCTACATGAGAGGTGTTTGGGTT------------------------------GAGACT---------------------GGATCATCACCTACTGTATACAGATATATTGACTGG------------------------TTAATTACAGTCCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTG---------TGC---ACAAATGTAAGCTCT---GGAGTT------------------------------------TTCTGGAGA---CTATTAGTAGCATCACTAGTAATGCTTATCTTTGGTTTCGTTGGTGAA---------ACT------------------GGT------GGT------------------------------------------------------------------------------------------------------AATGCA------------------ACAGTGATG---GGTCTTATTGCAACAGTAGCTTGGTTATACATTATCTGGGAAGTG---------------TTC------TCT---GGTGAAGCTGGACAACTTAATGCTTCT------AGC---GGTAATGCTGCAGCA---CAA---AGC---GCA---TTT---AAC---ACAATT---AGATGGATCGTAACCGTC---------------------------------------------------------------GGTTGG---------GCTATTTATCCTTTGGGATACTGGCTAGGCGCTATG---------------------------------------GGTGGCGGA---GATATGGCACAAGCTAACTTAATTTACAACCTTGCAGATTTTCTTAACAAAATTGCATTTGGTTTAGCTATTTATGTAGCTGCTGTAAGCGAC---TCAGAA--------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------LVYRFLYITGGSIFILLTTYKELYMKFLLMMVGAVALPAFA---ADLQTSDMTGVSFWLVTAAMLAATVFFFAERDRVHG-KWKTSLSVAGLVTGVAAWHYLYMRGVWV----------ET-------GSSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GV------------FWR-LLVASLVMLIFGFVGE---T------G--G----------------------------------NA------TVM-GLIATVAWLYIIWEV-----F--S-GEAGQLNAS--S-GNAAA-Q-S-A-F-N-TI-RWIVTV---------------------GW---AIYPLGYWLGAM-------------GGG-DMAQANLIYNLADFLNKIAFGLAIYVAAVSD-SE--------------------------------------- [IV-Gamma5-SAR86a]_JH611157 [IV-Gamma5-SAR86a] SAR86_cluster_bacterium_SAR86A_Contig_1_WGS_JH611157 gi|400756839|gb|JH611157| SAR86 cluster bacterium SAR86A genomic scaffold Contig 1, whole genome shotgun sequence SAR86 cluster bacterium SAR86A genomic scaffold Contig 1, whole genome shotgun sequence JH611157 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/Proteobacteria/Gammaproteobacteria/SAR86 cluster] taxon:1123866 genomic_DNA strain 14AUG2012 #na seawater_from_55_GOS_stations_collected_during_the_Global_Ocean_Sampling_Expedition #na marine #na Genomic insights to SAR86, an abundant and uncultivated marine bacterial lineage Dupont,C.L., Rusch,D.B., Yooseph,S., Lombardo,M.J., Richter,R.A., Valas,R., Novotny,M., YeeGreenbaum,J., Selengut,J.D., Haft,D.H., Halpern,A.L., Lasken,R.S., Nealson,K., Friedman,R. and Venter,J.C. ISME J 6 (6), 11861199 (2012) 22170421 genome assembled from metagenomic dataset ATGAAATTTTTATTAATGATGGTTGGTGCAGTTGCACTTCCAGCATTTGCTGCAGATTTGCAGACAAGTGACATGACAGGAGTATCATTCTGGCTGGTAACAGCCGCAATGCTTGCTGCTACTGTATTTTTCTTTGCAGAAAGAGACAGAGTTCATGGAAAATGGAAGACATCATTATCAGTAGCTGGTTTAGTTACTGGTGTGGCTGCCTGGCATTATCTCTACATGAGAGGTGTTTGGGTTGAGACTGGATCATCACCTACTGTATACAGATATATTGACTGGTTAATCACAGTCCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTGTGCACAAATGTAAGCTCTGGAGTTTTCTGGAGACTATTAGTAGCATCACTAGTAATGCTTATCTTTGGTTTCGTTGGTGAAACTGGTGGTAATGCAACAGTGATGGGTCTTATTGCAACAGTAGCTTGGTTATACATTATCTATGAAGTGTTCTCTGGTGAAGCTGGACAACTTAATGCTTCTAGCGGTAATGCTGCAGCACAAAGCGCATTTAACACAATTAGATGGATCGTAACCGTCGGTTGGGCTATTTATCCTTTGGGATACTGGCTAGGCGCTATGGGTGGCGGAGATATGGCACAAGCTAACTTAATTTACAACCTTGCAGATTTTCTTAACAAAATTGCATTTGGTTTAGCTATTTATGTAGCTGCTGTAAGCGACTCAGAA MKFLLMMVGAVALPAFAADLQTSDMTGVSFWLVTAAMLAATVFFFAERDRVHGKWKTSLSVAGLVTGVAAWHYLYMRGVWVETGSSPTVYRYIDWLITVPLQIIEFYLILKVCTNVSSGVFWRLLVASLVMLIFGFVGETGGNATVMGLIATVAWLYIIYEVFSGEAGQLNASSGNAAAQSAFNTIRWIVTVGWAIYPLGYWLGAMGGGDMAQANLIYNLADFLNKIAFGLAIYVAAVSDSE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAATTTTTATTAATGATGGTTGGTGCAGTTGCACTTCCAGCATTTGCT---------GCAGATTTGCAGACAAGTGACATGACAGGAGTATCATTCTGGCTGGTAACAGCCGCAATGCTTGCTGCTACTGTATTTTTCTTTGCAGAAAGAGACAGAGTTCATGGA---AAATGGAAGACATCATTATCAGTAGCTGGTTTAGTTACTGGTGTGGCTGCCTGGCATTATCTCTACATGAGAGGTGTTTGGGTT------------------------------GAGACT---------------------GGATCATCACCTACTGTATACAGATATATTGACTGG------------------------TTAATCACAGTCCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTG---------TGC---ACAAATGTAAGCTCT---GGAGTT------------------------------------TTCTGGAGA---CTATTAGTAGCATCACTAGTAATGCTTATCTTTGGTTTCGTTGGTGAA---------ACT------------------GGT------GGT------------------------------------------------------------------------------------------------------AATGCA------------------ACAGTGATG---GGTCTTATTGCAACAGTAGCTTGGTTATACATTATCTATGAAGTG---------------TTC------TCT---GGTGAAGCTGGACAACTTAATGCTTCT------AGC---GGTAATGCTGCAGCA---CAA---AGC---GCA---TTT---AAC---ACAATT---AGATGGATCGTAACCGTC---------------------------------------------------------------GGTTGG---------GCTATTTATCCTTTGGGATACTGGCTAGGCGCTATG---------------------------------------GGTGGCGGA---GATATGGCACAAGCTAACTTAATTTACAACCTTGCAGATTTTCTTAACAAAATTGCATTTGGTTTAGCTATTTATGTAGCTGCTGTAAGCGAC---TCAGAA--------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------MKFLLMMVGAVALPAFA---ADLQTSDMTGVSFWLVTAAMLAATVFFFAERDRVHG-KWKTSLSVAGLVTGVAAWHYLYMRGVWV----------ET-------GSSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GV------------FWR-LLVASLVMLIFGFVGE---T------G--G----------------------------------NA------TVM-GLIATVAWLYIIYEV-----F--S-GEAGQLNAS--S-GNAAA-Q-S-A-F-N-TI-RWIVTV---------------------GW---AIYPLGYWLGAM-------------GGG-DMAQANLIYNLADFLNKIAFGLAIYVAAVSD-SE--------------------------------------- [IV-Gamma5-SAR86a]_1112709884039 [IV-Gamma5-SAR86a] JCVI_ORF_1112709884039_GS119_Open_Ocean_2m jcvi|1112709884039| 1112709884039 JCVI ORF 1112709884039 1112709884039 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 26-sept-05 Open_Ocean/2m_depth/S_35.4_psu/GS119/International_Water_Outside_of_Reunion_Island/Indian_Ocean Indian Ocean marine -23.21611 52.30611 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TATGAATTTTTATTAATGATGGTTGGTGCAGTTGCACTTCCAGCATTTGCTGCAGATTTGCAGACAAGTGACATGACAGGAGTATCATTCTGGCTAGTAACAGCCGCAATGCTTGCTGCTACTGTATTTTTCTTTGCGGAAAGAGACAGAGTTCATGGAAAATGGAAGACATCATTATCAGTAGCTGGTTTAGTTACTGGTGTGGCTGCCTGGCATTATCTCTACATGAGAGGTGTTTGGGTTGAGACTGGATCATCACCTACTGTATACAGATACATTGACTGGTTAATCACAGTCCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTGTGCACAAATGTAAGCTCTGGAGTTTTCTGGAGACTATTAGTAGCATCACTAGTAATGCTTATCTTTGGTTTCGTTGGTGAAACTGGTGGTAATGCAGCAGTGATGGGTGCTATTGCAACAGCAGCTTGGTTATACATTATCTATGAAGTGTTCTCTGGTGAAGCTGGACAACTTAATGCTTCAAGCGGTAATGCTGCAGCACAAAGCGCATTTAATACAATCAGATGGATCGTAACCGTCGGTTGGGCTATTTATCCTATCGGATACTGGCTAGGCGCTATGGGTGGCGGAGATATGGCTCAAGCTAACATAATTTACAACCTTGCAGATTTTCTTAACAAAATCGCATTTGGTTTAGCTATTTATGTAGCTGCTGTAAGCGACTCAGAA YEFLLMMVGAVALPAFAADLQTSDMTGVSFWLVTAAMLAATVFFFAERDRVHGKWKTSLSVAGLVTGVAAWHYLYMRGVWVETGSSPTVYRYIDWLITVPLQIIEFYLILKVCTNVSSGVFWRLLVASLVMLIFGFVGETGGNAAVMGAIATAAWLYIIYEVFSGEAGQLNASSGNAAAQSAFNTIRWIVTVGWAIYPIGYWLGAMGGGDMAQANIIYNLADFLNKIAFGLAIYVAAVSDSE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGAATTTTTATTAATGATGGTTGGTGCAGTTGCACTTCCAGCATTTGCT---------GCAGATTTGCAGACAAGTGACATGACAGGAGTATCATTCTGGCTAGTAACAGCCGCAATGCTTGCTGCTACTGTATTTTTCTTTGCGGAAAGAGACAGAGTTCATGGA---AAATGGAAGACATCATTATCAGTAGCTGGTTTAGTTACTGGTGTGGCTGCCTGGCATTATCTCTACATGAGAGGTGTTTGGGTT------------------------------GAGACT---------------------GGATCATCACCTACTGTATACAGATACATTGACTGG------------------------TTAATCACAGTCCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTG---------TGC---ACAAATGTAAGCTCT---GGAGTT------------------------------------TTCTGGAGA---CTATTAGTAGCATCACTAGTAATGCTTATCTTTGGTTTCGTTGGTGAA---------ACT------------------GGT------GGT------------------------------------------------------------------------------------------------------AATGCA------------------GCAGTGATG---GGTGCTATTGCAACAGCAGCTTGGTTATACATTATCTATGAAGTG---------------TTC------TCT---GGTGAAGCTGGACAACTTAATGCTTCA------AGC---GGTAATGCTGCAGCA---CAA---AGC---GCA---TTT---AAT---ACAATC---AGATGGATCGTAACCGTC---------------------------------------------------------------GGTTGG---------GCTATTTATCCTATCGGATACTGGCTAGGCGCTATG---------------------------------------GGTGGCGGA---GATATGGCTCAAGCTAACATAATTTACAACCTTGCAGATTTTCTTAACAAAATCGCATTTGGTTTAGCTATTTATGTAGCTGCTGTAAGCGAC---TCAGAA--------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------YEFLLMMVGAVALPAFA---ADLQTSDMTGVSFWLVTAAMLAATVFFFAERDRVHG-KWKTSLSVAGLVTGVAAWHYLYMRGVWV----------ET-------GSSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GV------------FWR-LLVASLVMLIFGFVGE---T------G--G----------------------------------NA------AVM-GAIATAAWLYIIYEV-----F--S-GEAGQLNAS--S-GNAAA-Q-S-A-F-N-TI-RWIVTV---------------------GW---AIYPIGYWLGAM-------------GGG-DMAQANIIYNLADFLNKIAFGLAIYVAAVSD-SE--------------------------------------- [IV-Gamma5-SAR86a]_1105080910722 [IV-Gamma5-SAR86a] JCVI_ORF_1105080910722_GS030_Warm_Seep_19m jcvi|1105080910722| 1105080910722 JCVI ORF 1105080910722 1105080910722 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 09-FEB-2004 Warm_Seep/19m_depth/S_n.a/GS030/Warm_seep/Roca_Redonda/Galapagos_Islands Red Sea marine 0.27222222 -91.63333 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TTGCTCCACTACTTATATAAGGAGTTATATATGAAATTTTTATTAACAATGGTTGGTGCTCTTGCACTACCTGTTTTTGCAGCTGATTTAAATACGGCTGACATGACTGGAGTTTCATTCTGGCTGGTAACAGCTGCAATGCTTGCTGCTACTGTATTCTTTCTTGTAGAAAGAGACAGAGTTCATGGTAAATGGAAAACATCATTATCAGTTGCTGCTTTAGTTACTGGTGTGGCGTTTTGGCATTATCTATATATGAGAGGTGTTTGGGCTGAGTCTTACGACGCTGCAACGGGAGTAGGTAACTCTCCTACTGTATATAGATATATAGACTGGTTAATTACAGTCCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTGTGTACAAATGTAAGCTCTGGAGTTTTCTGGAGACTATTAGTAGCATCACTAGTAATGCTCATCTTTGGTTTCGTTGGTGAAACTGGTGGTAATGCAGCAGTGATGGGTGCTATTGCAACAGCAGCTTGGTTATACATTATCTATGAAGTGTTCTCTGGTGAAGCTGGACAACTTAACGCTTCAAGCGGTAATGCTGCAGCACAAAGCGCATTTAATACAATCAGATGGATCGTAACCATCGGTTGGGCTATTTATCCTATCGGATACTGGCTAGGCGCTATGGGTGGCGGAGATATGGCTCAAGCTAACATAATTTACAACCTTGCAGATTTTCTTACAAATCGCATTTGGTCTAGCTATTTATGTAGCTGCTGTAAGCGACTCAAATATATACTTTATTCA LLHYLYKELYMKFLLTMVGALALPVFAADLNTADMTGVSFWLVTAAMLAATVFFLVERDRVHGKWKTSLSVAALVTGVAFWHYLYMRGVWAESYDAATGVGNSPTVYRYIDWLITVPLQIIEFYLILKVCTNVSSGVFWRLLVASLVMLIFGFVGETGGNAAVMGAIATAAWLYIIYEVFSGEAGQLNASSGNAAAQSAFNTIRWIVTIGWAIYPIGYWLGAMGGGDMAQANIIYNLADFLTNRIWSSYLCSCCKRLKYILYS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTCCACTACTTATATAAGGAGTTATATATGAAATTTTTATTAACAATGGTTGGTGCTCTTGCACTACCTGTTTTTGCA---------GCTGATTTAAATACGGCTGACATGACTGGAGTTTCATTCTGGCTGGTAACAGCTGCAATGCTTGCTGCTACTGTATTCTTTCTTGTAGAAAGAGACAGAGTTCATGGT---AAATGGAAAACATCATTATCAGTTGCTGCTTTAGTTACTGGTGTGGCGTTTTGGCATTATCTATATATGAGAGGTGTTTGGGCT------------------------------GAGTCTTACGACGCTGCAACGGGAGTAGGTAACTCTCCTACTGTATATAGATATATAGACTGG------------------------TTAATTACAGTCCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTG---------TGT---ACAAATGTAAGCTCT---GGAGTT------------------------------------TTCTGGAGA---CTATTAGTAGCATCACTAGTAATGCTCATCTTTGGTTTCGTTGGTGAA---------ACT------------------GGT------GGT------------------------------------------------------------------------------------------------------AATGCA------------------GCAGTGATG---GGTGCTATTGCAACAGCAGCTTGGTTATACATTATCTATGAAGTG---------------TTC------TCT---GGTGAAGCTGGACAACTTAACGCTTCA------AGC---GGTAATGCTGCAGCA---CAA---AGC---GCA---TTT---AAT---ACAATC---AGATGGATCGTAACCATC---------------------------------------------------------------GGTTGG---------GCTATTTATCCTATCGGATACTGGCTAGGCGCTATG---------------------------------------GGTGGCGGA---GATATGGCTCAAGCTAACATAATTTACAACCTTGCAGATTTTCTTACAAATCGCATTTGG------TCTAGCTATTTATGTAGCTGCTGTAAG---CGACTCAAATATATACTTTATTCA--------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------LLHYLYKELYMKFLLTMVGALALPVFA---ADLNTADMTGVSFWLVTAAMLAATVFFLVERDRVHG-KWKTSLSVAALVTGVAFWHYLYMRGVWA----------ESYDAATGVGNSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GV------------FWR-LLVASLVMLIFGFVGE---T------G--G----------------------------------NA------AVM-GAIATAAWLYIIYEV-----F--S-GEAGQLNAS--S-GNAAA-Q-S-A-F-N-TI-RWIVTI---------------------GW---AIYPIGYWLGAM-------------GGG-DMAQANIIYNLADFLTNRIW--SSYLCSCCK-RLKYILYS--------------------------------- [IV-Gamma5-SAR86a]_1105087523438 [IV-Gamma5-SAR86a] JCVI_ORF_1105087523438_GS030_Warm_Seep_19m jcvi|1105087523438| 1105087523438 JCVI ORF 1105087523438 1105087523438 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 09-FEB-2004 Warm_Seep/19m_depth/S_n.a/GS030/Warm_seep/Roca_Redonda/Galapagos_Islands Red Sea marine 0.27222222 -91.63333 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TTGCTCCACTACTTATATAAGGAGTTATATATGAAATTTTTATTAACAATGGTTGGTGCTCTTGCACTACCTGTTTTTGCAGCTGATTTAAATACGGCTGACATGACTGGAGTTTCATTCTGGCTGGTAACAGCTGCAATGCTTGCTGCTACTGTATTCTTTCTTGTAGAAAGAGACAGAGTTCATGGTAAATGGAAAACATCATTATCAGTTGCTGCTTTAGTTACTGGTGTGGCGTTTTGGCATTATCTATATATGAGAGGTGTTTGGGCTGAGTCTTACGACGCTGCAACGGGAGTAGGTAACTCTCCTACTGTATATAGATATATAGACTGGTTAATTACAGTCCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTGTGTACAAATGTAAGCTCTGGAGTTTTCTGGAGACTATTAGTAGCATCACTAGTAATGCTCATCTTTGGTTTCGTTGGTGAAACTGGTGGTAATGCAGCAGTGATGGGTGCTATTGCAACAGCAGCTTGGTTATACATTATCTATGAAGTGTTCTCTGGTGAAGCTGGACAACTTAACGCTTCAAGCGGTAATGCTGCAGCACAAAGCGCATTTAATACAATCAGATGGATCGTAACCATCGGTTGGGCTATTTATCCTATCGGATACTGGCTAGGCGCTATGGGTGGCGGAGATATGGCTCAAGCTAACATAATTTACAACCTTGCAGATTTTCTTAACAAAATCGCATTTGGTCTAGCTATTTATGTAGCTGCTGTAAGCGACTCAGAA LLHYLYKELYMKFLLTMVGALALPVFAADLNTADMTGVSFWLVTAAMLAATVFFLVERDRVHGKWKTSLSVAALVTGVAFWHYLYMRGVWAESYDAATGVGNSPTVYRYIDWLITVPLQIIEFYLILKVCTNVSSGVFWRLLVASLVMLIFGFVGETGGNAAVMGAIATAAWLYIIYEVFSGEAGQLNASSGNAAAQSAFNTIRWIVTIGWAIYPIGYWLGAMGGGDMAQANIIYNLADFLNKIAFGLAIYVAAVSDSE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTCCACTACTTATATAAGGAGTTATATATGAAATTTTTATTAACAATGGTTGGTGCTCTTGCACTACCTGTTTTTGCA---------GCTGATTTAAATACGGCTGACATGACTGGAGTTTCATTCTGGCTGGTAACAGCTGCAATGCTTGCTGCTACTGTATTCTTTCTTGTAGAAAGAGACAGAGTTCATGGT---AAATGGAAAACATCATTATCAGTTGCTGCTTTAGTTACTGGTGTGGCGTTTTGGCATTATCTATATATGAGAGGTGTTTGGGCT------------------------------GAGTCTTACGACGCTGCAACGGGAGTAGGTAACTCTCCTACTGTATATAGATATATAGACTGG------------------------TTAATTACAGTCCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTG---------TGT---ACAAATGTAAGCTCT---GGAGTT------------------------------------TTCTGGAGA---CTATTAGTAGCATCACTAGTAATGCTCATCTTTGGTTTCGTTGGTGAA---------ACT------------------GGT------GGT------------------------------------------------------------------------------------------------------AATGCA------------------GCAGTGATG---GGTGCTATTGCAACAGCAGCTTGGTTATACATTATCTATGAAGTG---------------TTC------TCT---GGTGAAGCTGGACAACTTAACGCTTCA------AGC---GGTAATGCTGCAGCA---CAA---AGC---GCA---TTT---AAT---ACAATC---AGATGGATCGTAACCATC---------------------------------------------------------------GGTTGG---------GCTATTTATCCTATCGGATACTGGCTAGGCGCTATG---------------------------------------GGTGGCGGA---GATATGGCTCAAGCTAACATAATTTACAACCTTGCAGATTTTCTTAACAAAATCGCATTTGGTCTAGCTATTTATGTAGCTGCTGTAAGCGAC---TCAGAA--------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------LLHYLYKELYMKFLLTMVGALALPVFA---ADLNTADMTGVSFWLVTAAMLAATVFFLVERDRVHG-KWKTSLSVAALVTGVAFWHYLYMRGVWA----------ESYDAATGVGNSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GV------------FWR-LLVASLVMLIFGFVGE---T------G--G----------------------------------NA------AVM-GAIATAAWLYIIYEV-----F--S-GEAGQLNAS--S-GNAAA-Q-S-A-F-N-TI-RWIVTI---------------------GW---AIYPIGYWLGAM-------------GGG-DMAQANIIYNLADFLNKIAFGLAIYVAAVSD-SE--------------------------------------- [IV-Gamma5-SAR86a]_DQ339296 [IV-Gamma5-SAR86a] clone_S-S80M-E5_DQ339296 gi|85681565|gb|DQ339296| Uncultured bacterium clone S-S80M-E5 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-E5 predicted proteorhodopsin gene, partial cds. DQ339296 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTAATCACAGTTCCACTTCAAATTATTGAGTTCTACTTAATTCTTAAAGTGTGTACTAATGTTAGCTCAAGCGTGTTCTGGAAGCTCTTAGGCGCTTCTTTAGTAATGCTTGTTGTTGGTTTCATGGGTGAAACTGGCTCTAACGCATTAGTCTGTGGTGTTATTGCAACAATTGCATGGTTATACATTATCTACGAAGTATTCTCTGGCGAAGCTGGACAATTAAATGCTTCAAGTGGAAATGCTGCTGCACAAAGCGCATTTGGAACAATCAGATTGATTGTTACTTTTGGTTGGGCCATTTATCCA RYIDWLITVPLQIIEFYLILKVCTNVSSSVFWKLLGASLVMLVVGFMGETGSNALVCGVIATIAWLYIIYEVFSGEAGQLNASSGNAAAQSAFGTIRLIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATCACAGTTCCACTTCAAATTATTGAGTTCTACTTAATTCTTAAAGTG---------TGT---ACTAATGTTAGCTCA---AGCGTG------------------------------------TTCTGGAAG---CTCTTAGGCGCTTCTTTAGTAATGCTTGTTGTTGGTTTCATGGGTGAA---------ACT------------------GGC------TCT------------------------------------------------------------------------------------------------------AACGCA------------------TTAGTCTGT---GGTGTTATTGCAACAATTGCATGGTTATACATTATCTACGAAGTA---------------TTC------TCT---GGCGAAGCTGGACAATTAAATGCTTCA------AGT---GGAAATGCTGCTGCA---CAA---AGC---GCA---TTT---GGA---ACAATC---AGATTGATTGTTACTTTT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-SV------------FWK-LLGASLVMLVVGFMGE---T------G--S----------------------------------NA------LVC-GVIATIAWLYIIYEV-----F--S-GEAGQLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ339318 [IV-Gamma5-SAR86a] clone_S-S80M-G3_DQ339318 gi|85681609|gb|DQ339318| Uncultured bacterium clone S-S80M-G3 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-G3 predicted proteorhodopsin gene, partial cds. DQ339318 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTAATCACAGTTCCACTTCAAATTATTGAGTTCTACTTAATTCTTAAAGTGTGTACTAATGTTAGCTCAAGCGTGTTCTGGAAGCTCTTAGGCGCTTCTTTAGTAATGCTTGTTGTTGGTTTCATGGGTGAAACTGGCTCTAACGCATTAGTCTGTGGTGTTATTGCAACAATTGCATGGTTATACATTATCTACGAAGTATTCTCTGGCGAAGCTGGACAATTAAATGCTTCAAGTGGAAATGCTGCTGCACAAAGCGCATTTGGAACAATCAGATTGATTGTTACTTTTGGTTGGGCCATTTACCCA RYIDWLITVPLQIIEFYLILKVCTNVSSSVFWKLLGASLVMLVVGFMGETGSNALVCGVIATIAWLYIIYEVFSGEAGQLNASSGNAAAQSAFGTIRLIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATCACAGTTCCACTTCAAATTATTGAGTTCTACTTAATTCTTAAAGTG---------TGT---ACTAATGTTAGCTCA---AGCGTG------------------------------------TTCTGGAAG---CTCTTAGGCGCTTCTTTAGTAATGCTTGTTGTTGGTTTCATGGGTGAA---------ACT------------------GGC------TCT------------------------------------------------------------------------------------------------------AACGCA------------------TTAGTCTGT---GGTGTTATTGCAACAATTGCATGGTTATACATTATCTACGAAGTA---------------TTC------TCT---GGCGAAGCTGGACAATTAAATGCTTCA------AGT---GGAAATGCTGCTGCA---CAA---AGC---GCA---TTT---GGA---ACAATC---AGATTGATTGTTACTTTT---------------------------------------------------------------GGTTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-SV------------FWK-LLGASLVMLVVGFMGE---T------G--S----------------------------------NA------LVC-GVIATIAWLYIIYEV-----F--S-GEAGQLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ422315 [IV-Gamma5-SAR86a] clone_med-20m-f4_DQ422315 gi|90024150|gb|DQ422315| Uncultured bacterium clone med-20m-f4 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-f4 putative proteorhodopsin gene, partial cds. DQ422315 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATCACAGTTCCACTTCAAATCATTGAGTTCTACTTAATTCTTAAAGTGTGTACTAATGTTAGCTCAAGCGTATTCTGGAAGCTCTTAGGCGCTTCTTTAGTAATGCTTGTTGTTGGTTTCATGGGTGAAACTGGCTCTAACGCATTAGTCTGTGGTGTTATTGCAACAATTGCATGGTTATACATTATCTACGAAGTATTCTCTGGCGAAGCTGGACAATTAAATGCTTCAAGTGGAAATGCTGCTGCACAAAGCGCATTTGGAACAATCAGATTGATTGTTACTTTTGGTTGGGCTATTTACCCA RYIDWLITVPLQIIEFYLILKVCTNVSSSVFWKLLGASLVMLVVGFMGETGSNALVCGVIATIAWLYIIYEVFSGEAGQLNASSGNAAAQSAFGTIRLIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATCACAGTTCCACTTCAAATCATTGAGTTCTACTTAATTCTTAAAGTG---------TGT---ACTAATGTTAGCTCA---AGCGTA------------------------------------TTCTGGAAG---CTCTTAGGCGCTTCTTTAGTAATGCTTGTTGTTGGTTTCATGGGTGAA---------ACT------------------GGC------TCT------------------------------------------------------------------------------------------------------AACGCA------------------TTAGTCTGT---GGTGTTATTGCAACAATTGCATGGTTATACATTATCTACGAAGTA---------------TTC------TCT---GGCGAAGCTGGACAATTAAATGCTTCA------AGT---GGAAATGCTGCTGCA---CAA---AGC---GCA---TTT---GGA---ACAATC---AGATTGATTGTTACTTTT---------------------------------------------------------------GGTTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-SV------------FWK-LLGASLVMLVVGFMGE---T------G--S----------------------------------NA------LVC-GVIATIAWLYIIYEV-----F--S-GEAGQLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_1105119467360 [IV-Gamma5-SAR86a] JCVI_ORF_1105119467360_GS027_Coastal_3m jcvi|1105119467360| 1105119467360 JCVI ORF 1105119467360 1105119467360 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 04-FEB-2004 Coastal/3m_depth/S_34.9_psu/GS027/Devils_Crown/Floreana_Island/Galapagos_Islands Pacific Ocean marine -1.2161111 -90.422775 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATATATGAAATTTTTATTAATGATGGTGGTGCAGTAGCACTTCCAGCATTTGCTGCGGATCTGCAGACAAGTGACGTAACAGGAGTAACATTCTGGCTGGTAACAGCTGCTATGCTTGCTGCTACTGTTTTCTTCTTTGTTGAAAGAGACAGAGTTCACGGCAAATGGAAAACATCATTATCAGTAGCTGGTTTGGTTACTGGTGTGGCGTTTTGGCATTATCTCTATATGAGAGGTGTTTGGGTTGAAACTGGATCATCACCTACAGTATACAGATACATTGACTGGTTAATCACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTGTGTACGAATGTTAGCTCAAGCGTTTTCTGGAAGCTTCTAGGAGCTTCACTAGTTATGCTTGTTGTTGGTTTCATGGGTGAAACTGGCTCTAACGCACTAGTTTGTGGAATCGTAGCAACCGCTGCATGGTTATACATTATCTATGAAGTATTCTCTGGCGAAGCTGGACAATTAAATGCTTCAAGTGGTAATGCTGCTGCACAAAGCGCTTTTGGAACAATCAGATTGATTGTTACTTTTGGTTGGGCTATATATCCAATAGGATATTGGCTTGGTGCTATGGGTGGCGGTGATATGGCCGGTGCAAATACTATCTACAACCTCGCTGATTTTATTAACAAAATCGCGTTTGGTTTAGCTATTTATGTAGCTGCTGTAAGCGACTCAGAA IYEIFINDGGAVALPAFAADLQTSDVTGVTFWLVTAAMLAATVFFFVERDRVHGKWKTSLSVAGLVTGVAFWHYLYMRGVWVETGSSPTVYRYIDWLITVPLQIIEFYLILKVCTNVSSSVFWKLLGASLVMLVVGFMGETGSNALVCGIVATAAWLYIIYEVFSGEAGQLNASSGNAAAQSAFGTIRLIVTFGWAIYPIGYWLGAMGGGDMAGANTIYNLADFINKIAFGLAIYVAAVSDSE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATATGAAATTTTTATTAATGATGGTGGTGCAGTAGCACTTCCAGCATTTGCT---------GCGGATCTGCAGACAAGTGACGTAACAGGAGTAACATTCTGGCTGGTAACAGCTGCTATGCTTGCTGCTACTGTTTTCTTCTTTGTTGAAAGAGACAGAGTTCACGGC---AAATGGAAAACATCATTATCAGTAGCTGGTTTGGTTACTGGTGTGGCGTTTTGGCATTATCTCTATATGAGAGGTGTTTGGGTT------------------------------GAAACT---------------------GGATCATCACCTACAGTATACAGATACATTGACTGG------------------------TTAATCACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTG---------TGT---ACGAATGTTAGCTCA---AGCGTT------------------------------------TTCTGGAAG---CTTCTAGGAGCTTCACTAGTTATGCTTGTTGTTGGTTTCATGGGTGAA---------ACT------------------GGC------TCT------------------------------------------------------------------------------------------------------AACGCA------------------CTAGTTTGT---GGAATCGTAGCAACCGCTGCATGGTTATACATTATCTATGAAGTA---------------TTC------TCT---GGCGAAGCTGGACAATTAAATGCTTCA------AGT---GGTAATGCTGCTGCA---CAA---AGC---GCT---TTT---GGA---ACAATC---AGATTGATTGTTACTTTT---------------------------------------------------------------GGTTGG---------GCTATATATCCAATAGGATATTGGCTTGGTGCTATG---------------------------------------GGTGGCGGT---GATATGGCCGGTGCAAATACTATCTACAACCTCGCTGATTTTATTAACAAAATCGCGTTTGGTTTAGCTATTTATGTAGCTGCTGTAAGCGAC---TCAGAA--------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------IYEIFINDGGAVALPAFA---ADLQTSDVTGVTFWLVTAAMLAATVFFFVERDRVHG-KWKTSLSVAGLVTGVAFWHYLYMRGVWV----------ET-------GSSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-SV------------FWK-LLGASLVMLVVGFMGE---T------G--S----------------------------------NA------LVC-GIVATAAWLYIIYEV-----F--S-GEAGQLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTF---------------------GW---AIYPIGYWLGAM-------------GGG-DMAGANTIYNLADFINKIAFGLAIYVAAVSD-SE--------------------------------------- [IV-Gamma5-SAR86a]_1105087539500 [IV-Gamma5-SAR86a] JCVI_ORF_1105087539500_GS028_Coastal_2m jcvi|1105087539500| 1105087539500 JCVI ORF 1105087539500 1105087539500 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 04-FEB-2004 Coastal/2m_depth/S_n.a/GS028/Coastal_Floreana/Galapagos_Islands Pacific Ocean marine -1.2169445 -90.319725 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATTATGCTCCACTACTATATAAGGAGTATATATGAAATTTTTATTAACACTCGCAGGCGTTCTCGCACTTCTGCTTTTGCTGCTGACTTGCAGACAAGTGATATTACAGGAGTAACATTCTGGCTGGTAACAGCTGCTATGCTTGCTGCTACTGTATTTTTCTTTGTTGAAAGAGACAGAGTACACGGCAAATGGAAAACATCATTATCAGTTGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCACTATCTTTATATGAGAGGTGTTTGGGTAGAAACTGGAACATCGCCTACTGTATACAGATACATTGACTGGTTAATCACAGTACCACTTCAAATTATTGAGTTCTACTTAATTCTTAAAGTTTGTACTAACGTGGCATCAAGCGTATTTTGGAGACTTTTAGGAGCTTCATTAGTTATGCTTGTTGTTGGTTTCATGGGTGAAACTGGTTCAAATGCAATGGTATGCGGAATAGTGGCAACACTTGCATGGTTATATATCATATATGAAGTATTCTCTGGCGAAGCTGGAAAACTAAATGCTTCAAGTGGTAACGCTGCAGCACAAAGCGCATTTGGAACAATCAGATTGATTGTTACTTTTGGTTGGGCTATATATCCAATTGGATATTGGCTAGGCGCTATGGGTGGCGGTGATATGGCTGGTGCAAATACAATCTATAACCTTGCTGATTTTATTAACAAAATCGCATTTGGTTTAGCGATATATGTAGCTGCTGTAAGCGACTCAGAA IMLHYYIRSIYEIFINTRRRSRTSAFAADLQTSDITGVTFWLVTAAMLAATVFFFVERDRVHGKWKTSLSVAGLVTGVAFWHYLYMRGVWVETGTSPTVYRYIDWLITVPLQIIEFYLILKVCTNVASSVFWRLLGASLVMLVVGFMGETGSNAMVCGIVATLAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTFGWAIYPIGYWLGAMGGGDMAGANTIYNLADFINKIAFGLAIYVAAVSDSE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTATGCTCCACTACTATATAAGGAGTATATATGAAATTTTTATTAACACTCGCAGGCGTTCTCGCACTTCTGCTTTTGCT---------GCTGACTTGCAGACAAGTGATATTACAGGAGTAACATTCTGGCTGGTAACAGCTGCTATGCTTGCTGCTACTGTATTTTTCTTTGTTGAAAGAGACAGAGTACACGGC---AAATGGAAAACATCATTATCAGTTGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCACTATCTTTATATGAGAGGTGTTTGGGTA------------------------------GAAACT---------------------GGAACATCGCCTACTGTATACAGATACATTGACTGG------------------------TTAATCACAGTACCACTTCAAATTATTGAGTTCTACTTAATTCTTAAAGTT---------TGT---ACTAACGTGGCATCA---AGCGTA------------------------------------TTTTGGAGA---CTTTTAGGAGCTTCATTAGTTATGCTTGTTGTTGGTTTCATGGGTGAA---------ACT------------------GGT------TCA------------------------------------------------------------------------------------------------------AATGCA------------------ATGGTATGC---GGAATAGTGGCAACACTTGCATGGTTATATATCATATATGAAGTA---------------TTC------TCT---GGCGAAGCTGGAAAACTAAATGCTTCA------AGT---GGTAACGCTGCAGCA---CAA---AGC---GCA---TTT---GGA---ACAATC---AGATTGATTGTTACTTTT---------------------------------------------------------------GGTTGG---------GCTATATATCCAATTGGATATTGGCTAGGCGCTATG---------------------------------------GGTGGCGGT---GATATGGCTGGTGCAAATACAATCTATAACCTTGCTGATTTTATTAACAAAATCGCATTTGGTTTAGCGATATATGTAGCTGCTGTAAGCGAC---TCAGAA--------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------IMLHYYIRSIYEIFINTRRRSRTSAFA---ADLQTSDITGVTFWLVTAAMLAATVFFFVERDRVHG-KWKTSLSVAGLVTGVAFWHYLYMRGVWV----------ET-------GTSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVAS-SV------------FWR-LLGASLVMLVVGFMGE---T------G--S----------------------------------NA------MVC-GIVATLAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTF---------------------GW---AIYPIGYWLGAM-------------GGG-DMAGANTIYNLADFINKIAFGLAIYVAAVSD-SE--------------------------------------- [IV-Gamma5-SAR86a]_DQ339395 [IV-Gamma5-SAR86a] clone_S-S4OM-F9_DQ339395 gi|85681761|gb|DQ339395| Uncultured bacterium clone S-S4OM-F9 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-F9 predicted proteorhodopsin gene, partial cds. DQ339395 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGCTACATAGACTGGCTAATCACAGTTCCACTTCAAATTATTGAGTTCTACTTAATTCTTAAAGTGTGTACCAATGTTAGCTCAAGTGTTTTCTGGAAGCTTTTAGGAGCTTCGTTAGTGATGCTTATTGTTGGCTTTATGGGTGAAGCTGGTTCAAACGCAATGGTTTGCGGAATAGTTGCAACAATTGCATGGTTATATATTATCTGGGAAGTATTTTCTGGCGAAGCTGGACAACTTAATGCTTCAAGTGGTAATGCTGCAGCACAAAGCGCATTTGGAACAATCAGACTGATTGTTACTTTTGGGTGGGCCATCTATCCA SYIDWLITVPLQIIEFYLILKVCTNVSSSVFWKLLGASLVMLIVGFMGEAGSNAMVCGIVATIAWLYIIWEVFSGEAGQLNASSGNAAAQSAFGTIRLIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATAGACTGG------------------------CTAATCACAGTTCCACTTCAAATTATTGAGTTCTACTTAATTCTTAAAGTG---------TGT---ACCAATGTTAGCTCA---AGTGTT------------------------------------TTCTGGAAG---CTTTTAGGAGCTTCGTTAGTGATGCTTATTGTTGGCTTTATGGGTGAA---------GCT------------------GGT------TCA------------------------------------------------------------------------------------------------------AACGCA------------------ATGGTTTGC---GGAATAGTTGCAACAATTGCATGGTTATATATTATCTGGGAAGTA---------------TTT------TCT---GGCGAAGCTGGACAACTTAATGCTTCA------AGT---GGTAATGCTGCAGCA---CAA---AGC---GCA---TTT---GGA---ACAATC---AGACTGATTGTTACTTTT---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-SV------------FWK-LLGASLVMLIVGFMGE---A------G--S----------------------------------NA------MVC-GIVATIAWLYIIWEV-----F--S-GEAGQLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_1105115357080 [IV-Gamma5-SAR86a] JCVI_ORF_1105115357080_GS030_Warm_Seep_19m jcvi|1105115357080| 1105115357080 JCVI ORF 1105115357080 1105115357080 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 09-FEB-2004 Warm_Seep/19m_depth/S_n.a/GS030/Warm_seep/Roca_Redonda/Galapagos_Islands Red Sea marine 0.27222222 -91.63333 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf GTTAGCTTGAGTGGTGCAGTAGCACTTCCAGCATTTGCTGCGGATCTGCAGACAAGTGACGTAACAGGAGTAACATTCTGGCTGGTAACAGCTGCTATGCTTGCTGCTACTGTTTTCTTCTTTGTTGAAAGAGACAGAGTTCACGGCAAATGGAAAACATCATTATCAGTAGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTATCTCTACATGAGAGGTGTTTGGGTTGAAACTGGATCATCACCTACAGTATACAGATACATTGACTGGTTAATCACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTGTGTACGAATGTTAGCTCAAGCGTTTTCTGGAAGCTTTTAGGAGCTTCATTAGTGATGCTTGTAGTTGGTTTCATGGGAGAAACTGGTTCAAACGCAATGGTTTGTGGAATAGTTGCAACACTTGCATGGTTATATATTATCTATGAAGTATTTTCTGGTGAAGCCGGACAACTTAATGCTTCAAGTGGTAATGCTGCAGCACAAAGCGCATTTGGAACAATCAGACTGATTGTTACTTTTGGTTGGGCTATATATCCAATTGGATATTGGCTAGGCGCTATGGGTGGCGGTGATATGGCAGGTGCTAATACAATCTATAACCTCGCTGATTTTATTAACAAAATCGCGTTTGGTTTAGCTATTTATGTAGCTGCTGTAAGCGACTCAGAA VSLSGAVALPAFAADLQTSDVTGVTFWLVTAAMLAATVFFFVERDRVHGKWKTSLSVAGLVTGVAFWHYLYMRGVWVETGSSPTVYRYIDWLITVPLQIIEFYLILKVCTNVSSSVFWKLLGASLVMLVVGFMGETGSNAMVCGIVATLAWLYIIYEVFSGEAGQLNASSGNAAAQSAFGTIRLIVTFGWAIYPIGYWLGAMGGGDMAGANTIYNLADFINKIAFGLAIYVAAVSDSE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTAGCTTGAGTGGTGCAGTAGCACTTCCAGCATTTGCT---------GCGGATCTGCAGACAAGTGACGTAACAGGAGTAACATTCTGGCTGGTAACAGCTGCTATGCTTGCTGCTACTGTTTTCTTCTTTGTTGAAAGAGACAGAGTTCACGGC---AAATGGAAAACATCATTATCAGTAGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTATCTCTACATGAGAGGTGTTTGGGTT------------------------------GAAACT---------------------GGATCATCACCTACAGTATACAGATACATTGACTGG------------------------TTAATCACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTG---------TGT---ACGAATGTTAGCTCA---AGCGTT------------------------------------TTCTGGAAG---CTTTTAGGAGCTTCATTAGTGATGCTTGTAGTTGGTTTCATGGGAGAA---------ACT------------------GGT------TCA------------------------------------------------------------------------------------------------------AACGCA------------------ATGGTTTGT---GGAATAGTTGCAACACTTGCATGGTTATATATTATCTATGAAGTA---------------TTT------TCT---GGTGAAGCCGGACAACTTAATGCTTCA------AGT---GGTAATGCTGCAGCA---CAA---AGC---GCA---TTT---GGA---ACAATC---AGACTGATTGTTACTTTT---------------------------------------------------------------GGTTGG---------GCTATATATCCAATTGGATATTGGCTAGGCGCTATG---------------------------------------GGTGGCGGT---GATATGGCAGGTGCTAATACAATCTATAACCTCGCTGATTTTATTAACAAAATCGCGTTTGGTTTAGCTATTTATGTAGCTGCTGTAAGCGAC---TCAGAA--------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------VSLSGAVALPAFA---ADLQTSDVTGVTFWLVTAAMLAATVFFFVERDRVHG-KWKTSLSVAGLVTGVAFWHYLYMRGVWV----------ET-------GSSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-SV------------FWK-LLGASLVMLVVGFMGE---T------G--S----------------------------------NA------MVC-GIVATLAWLYIIYEV-----F--S-GEAGQLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTF---------------------GW---AIYPIGYWLGAM-------------GGG-DMAGANTIYNLADFINKIAFGLAIYVAAVSD-SE--------------------------------------- [IV-Gamma5-SAR86a]_1105142165486 [IV-Gamma5-SAR86a] JCVI_ORF_1105142165486_GS028_Coastal_2m jcvi|1105142165486| 1105142165486 JCVI ORF 1105142165486 1105142165486 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 04-FEB-2004 Coastal/2m_depth/S_n.a/GS028/Coastal_Floreana/Galapagos_Islands Pacific Ocean marine -1.2169445 -90.319725 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATAATAGATATCTCAAATTTGCTACCTTTGAGATTTTGGTATCATAGATTCTTGTATATTAACGGGGGGGAGTATTTTGTACTCCAATCTACTTATAAGGAGTTATATATGAAATTTTTATTAATGATGGTTGGTGCAGTAGCACTTCCAGCATTTGCTGCGGATCTGCAGACAAGTGACGTAACAGGAGTAACATTCTGGCTGGTAACAGCTGCTATGCTTGCTGCTACTGTTTTCTTCTTTGTTGAAAGAGACAGAGTTCACGGCAAATGGAAAACATCATTATCAGTAGCTGGTTTGGTTACTGGTGTGGCGTTTTGGCATTATCTCTACATGAGAGGTGTTTGGGTTGAAACTGGATCATCACCTACAGTATACAGATACATTGACTGGTTAATCACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTGTGTACGAATGTTAGCTCAAGCGTTTTCTGGAAGCTTTTAGGAGCTTCATTAGTGATGCTTGTAGTTGGTTTCATGGGAGAAACTGGTTCAAACGCAATGGTTTGCGGAATAGTTGCAACACTTGCATGGTTATATATTATCTATGAAGTATTTTCTGGTGAAGCCGGACAACTTAATGCTTCAAGTGGTAATGCTGCAGCACAAAGCGCATTTGGAACAATCAGACTGATTGTTACTTTTGGTTGGGCTATATATCCAATTGGATATTGGCTAGGCGCTATGGGTGGCGGTGATATGGCAGGTGCTAATACAATCTATAACCTCGCTGATTTTATTAACAAAATCGCGTTTGGTTTAGCTATTTATGTAGCTGCTGTAAGCGACTCAGAA IIDISNLLPLRFWYHRFLYINGGEYFVLQSTYKELYMKFLLMMVGAVALPAFAADLQTSDVTGVTFWLVTAAMLAATVFFFVERDRVHGKWKTSLSVAGLVTGVAFWHYLYMRGVWVETGSSPTVYRYIDWLITVPLQIIEFYLILKVCTNVSSSVFWKLLGASLVMLVVGFMGETGSNAMVCGIVATLAWLYIIYEVFSGEAGQLNASSGNAAAQSAFGTIRLIVTFGWAIYPIGYWLGAMGGGDMAGANTIYNLADFINKIAFGLAIYVAAVSDSE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATAGATATCTCAAATTTGCTACCTTTGAGATTTTGGTATCATAGATTCTTGTATATTAACGGGGGGGAGTATTTTGTACTCCAATCTACTTATAAGGAGTTATATATGAAATTTTTATTAATGATGGTTGGTGCAGTAGCACTTCCAGCATTTGCT---------GCGGATCTGCAGACAAGTGACGTAACAGGAGTAACATTCTGGCTGGTAACAGCTGCTATGCTTGCTGCTACTGTTTTCTTCTTTGTTGAAAGAGACAGAGTTCACGGC---AAATGGAAAACATCATTATCAGTAGCTGGTTTGGTTACTGGTGTGGCGTTTTGGCATTATCTCTACATGAGAGGTGTTTGGGTT------------------------------GAAACT---------------------GGATCATCACCTACAGTATACAGATACATTGACTGG------------------------TTAATCACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTG---------TGT---ACGAATGTTAGCTCA---AGCGTT------------------------------------TTCTGGAAG---CTTTTAGGAGCTTCATTAGTGATGCTTGTAGTTGGTTTCATGGGAGAA---------ACT------------------GGT------TCA------------------------------------------------------------------------------------------------------AACGCA------------------ATGGTTTGC---GGAATAGTTGCAACACTTGCATGGTTATATATTATCTATGAAGTA---------------TTT------TCT---GGTGAAGCCGGACAACTTAATGCTTCA------AGT---GGTAATGCTGCAGCA---CAA---AGC---GCA---TTT---GGA---ACAATC---AGACTGATTGTTACTTTT---------------------------------------------------------------GGTTGG---------GCTATATATCCAATTGGATATTGGCTAGGCGCTATG---------------------------------------GGTGGCGGT---GATATGGCAGGTGCTAATACAATCTATAACCTCGCTGATTTTATTAACAAAATCGCGTTTGGTTTAGCTATTTATGTAGCTGCTGTAAGCGAC---TCAGAA--------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------IIDISNLLPLRFWYHRFLYINGGEYFVLQSTYKELYMKFLLMMVGAVALPAFA---ADLQTSDVTGVTFWLVTAAMLAATVFFFVERDRVHG-KWKTSLSVAGLVTGVAFWHYLYMRGVWV----------ET-------GSSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-SV------------FWK-LLGASLVMLVVGFMGE---T------G--S----------------------------------NA------MVC-GIVATLAWLYIIYEV-----F--S-GEAGQLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTF---------------------GW---AIYPIGYWLGAM-------------GGG-DMAGANTIYNLADFINKIAFGLAIYVAAVSD-SE--------------------------------------- [IV-Gamma5-SAR86a]_1105087568072 [IV-Gamma5-SAR86a] JCVI_ORF_1105087568072_GS028_Coastal_2m jcvi|1105087568072| 1105087568072 JCVI ORF 1105087568072 1105087568072 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 04-FEB-2004 Coastal/2m_depth/S_n.a/GS028/Coastal_Floreana/Galapagos_Islands Pacific Ocean marine -1.2169445 -90.319725 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf CTTATAATAGATATCTCAAATTTGCTACCTTTGAGATTTTGGTATCATAGATTCTTGTATATTAACGGGGGGAGTATTTTTGTACTCCAATCTACTTATAAGGAGTTATATATGAAATTTTTATTAATGATGGTTGGTGCAGTAGCACTTCCAGCATTTGCTGCGGATCTGCAGACAAGTGACGTAACAGGAGTAACATTCTGGCTGGTAACAGCTGCTATGCTTGCTGCTACTGTTTTCTTCTTTGTTGAAAGAGACAGAGTTCACGGCAAATGGAAAACATCATTATCAGTAGCTGGTTTGGTTACTGGTGTGGCGTTTTGGCATTATCTCTATATGAGAGGTGTTTGGGTTGAAACTGGAACATCACCTACAGTATACAGATACATTGACTGGTTAATCACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTGTGTACGAATGTTAGCTCAAGCGTTTTCTGGAAGCTTTTAGGAGCTTCATTAGTGATGCTTGTGGTTGGTTTCATGGGAGAAACTGGTTCAAACGCAATGGTTTGCGGAATAGTTGCAACCGCTGCATGGTTGTATATTATCTATGAAGTATTTTCTGGTGAAGCCGGAAAACTTAATGCTTCAAGTGGTAATGCTGCAGCACAAAGCGCATTTGGAACAATCAGACTGATTGTTACTTTTGGTTGGGCTATCTATCCAATAGGTTATTGGATGGGTGTAGGCGATAACCCTGATATGGCTGGTGCAAATACAATCTATAACCTTGCTGATTTTATTAACAAAATCGCATTTGGTTTAGCTATTTATGTAGCTGCTGTAAGCGACTCAGAA LIIDISNLLPLRFWYHRFLYINGGSIFVLQSTYKELYMKFLLMMVGAVALPAFAADLQTSDVTGVTFWLVTAAMLAATVFFFVERDRVHGKWKTSLSVAGLVTGVAFWHYLYMRGVWVETGTSPTVYRYIDWLITVPLQIIEFYLILKVCTNVSSSVFWKLLGASLVMLVVGFMGETGSNAMVCGIVATAAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTFGWAIYPIGYWMGVGDNPDMAGANTIYNLADFINKIAFGLAIYVAAVSDSE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATAATAGATATCTCAAATTTGCTACCTTTGAGATTTTGGTATCATAGATTCTTGTATATTAACGGGGGGAGTATTTTTGTACTCCAATCTACTTATAAGGAGTTATATATGAAATTTTTATTAATGATGGTTGGTGCAGTAGCACTTCCAGCATTTGCT---------GCGGATCTGCAGACAAGTGACGTAACAGGAGTAACATTCTGGCTGGTAACAGCTGCTATGCTTGCTGCTACTGTTTTCTTCTTTGTTGAAAGAGACAGAGTTCACGGC---AAATGGAAAACATCATTATCAGTAGCTGGTTTGGTTACTGGTGTGGCGTTTTGGCATTATCTCTATATGAGAGGTGTTTGGGTT------------------------------GAAACT---------------------GGAACATCACCTACAGTATACAGATACATTGACTGG------------------------TTAATCACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTG---------TGT---ACGAATGTTAGCTCA---AGCGTT------------------------------------TTCTGGAAG---CTTTTAGGAGCTTCATTAGTGATGCTTGTGGTTGGTTTCATGGGAGAA---------ACT------------------GGT------TCA------------------------------------------------------------------------------------------------------AACGCA------------------ATGGTTTGC---GGAATAGTTGCAACCGCTGCATGGTTGTATATTATCTATGAAGTA---------------TTT------TCT---GGTGAAGCCGGAAAACTTAATGCTTCA------AGT---GGTAATGCTGCAGCA---CAA---AGC---GCA---TTT---GGA---ACAATC---AGACTGATTGTTACTTTT---------------------------------------------------------------GGTTGG---------GCTATCTATCCAATAGGTTATTGGATGGGTGTAGGC---------------------------------------GATAACCCT---GATATGGCTGGTGCAAATACAATCTATAACCTTGCTGATTTTATTAACAAAATCGCATTTGGTTTAGCTATTTATGTAGCTGCTGTAAGCGAC---TCAGAA--------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------LIIDISNLLPLRFWYHRFLYINGGSIFVLQSTYKELYMKFLLMMVGAVALPAFA---ADLQTSDVTGVTFWLVTAAMLAATVFFFVERDRVHG-KWKTSLSVAGLVTGVAFWHYLYMRGVWV----------ET-------GTSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-SV------------FWK-LLGASLVMLVVGFMGE---T------G--S----------------------------------NA------MVC-GIVATAAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTF---------------------GW---AIYPIGYWMGVG-------------DNP-DMAGANTIYNLADFINKIAFGLAIYVAAVSD-SE--------------------------------------- [IV-Gamma5-SAR86a]_1105136860629 [IV-Gamma5-SAR86a] JCVI_ORF_1105136860629_GS030_Warm_Seep_19m jcvi|1105136860629| 1105136860629 JCVI ORF 1105136860629 1105136860629 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 09-FEB-2004 Warm_Seep/19m_depth/S_n.a/GS030/Warm_seep/Roca_Redonda/Galapagos_Islands Red Sea marine 0.27222222 -91.63333 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf GTGAAGGTTGGTGCAGTAGCACTTCCAGCATTTGCTGCGGATCTGCAGACAAGTGACGTAACAGGAGTAACATTCTGGCTGGTAACAGCTGCTATGCTTGCTGCTACTGTTTTCTTCTTTGTTGAAAGAGACAGAGTTCACGGCAAATGGAAAACATCATTATCAGTAGCTGGTTTGGTTACTGGTGTGGCGTTTTGGCATTATCTCTATATGAGAGGTGTTTGGGTTGAAACTGGAACATCACCTACAGTATACAGATACATTGACTGGTTAATCACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTGTGTACGAATGTTAGCTCAAGCGTTTTCTGGAAGCTTTTAGGAGCTTCATTAGTGATGCTTGTGGTTGGTTTCATGGGAGAAACTGGTTCAAACGCAATGGTTTGCGGAATAGTTGCAACCGCTGCATGGTTGTATATTATCTATGAAGTATTTTCTGGTGAAGCCGGAAAACTTAATGCTTCAAGTGGTAATGCTGCAGCACAAAGCGCATTTGGAACAATCAGACTGATTGTTACTTTTGGTTGGGCTATCTATCCAATAGGTTATTGGATGGGTGTAGGCGATAACCCTGATATGGCTGGTGCAAATACAATCTATAACCTTGCTGATTTTATTAACAAAATCGCATTTGGTTTAGCTATTTATGTAGCTGCTGTAAGCGACTCAGAA VKVGAVALPAFAADLQTSDVTGVTFWLVTAAMLAATVFFFVERDRVHGKWKTSLSVAGLVTGVAFWHYLYMRGVWVETGTSPTVYRYIDWLITVPLQIIEFYLILKVCTNVSSSVFWKLLGASLVMLVVGFMGETGSNAMVCGIVATAAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTFGWAIYPIGYWMGVGDNPDMAGANTIYNLADFINKIAFGLAIYVAAVSDSE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGAAGGTTGGTGCAGTAGCACTTCCAGCATTTGCT---------GCGGATCTGCAGACAAGTGACGTAACAGGAGTAACATTCTGGCTGGTAACAGCTGCTATGCTTGCTGCTACTGTTTTCTTCTTTGTTGAAAGAGACAGAGTTCACGGC---AAATGGAAAACATCATTATCAGTAGCTGGTTTGGTTACTGGTGTGGCGTTTTGGCATTATCTCTATATGAGAGGTGTTTGGGTT------------------------------GAAACT---------------------GGAACATCACCTACAGTATACAGATACATTGACTGG------------------------TTAATCACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTG---------TGT---ACGAATGTTAGCTCA---AGCGTT------------------------------------TTCTGGAAG---CTTTTAGGAGCTTCATTAGTGATGCTTGTGGTTGGTTTCATGGGAGAA---------ACT------------------GGT------TCA------------------------------------------------------------------------------------------------------AACGCA------------------ATGGTTTGC---GGAATAGTTGCAACCGCTGCATGGTTGTATATTATCTATGAAGTA---------------TTT------TCT---GGTGAAGCCGGAAAACTTAATGCTTCA------AGT---GGTAATGCTGCAGCA---CAA---AGC---GCA---TTT---GGA---ACAATC---AGACTGATTGTTACTTTT---------------------------------------------------------------GGTTGG---------GCTATCTATCCAATAGGTTATTGGATGGGTGTAGGC---------------------------------------GATAACCCT---GATATGGCTGGTGCAAATACAATCTATAACCTTGCTGATTTTATTAACAAAATCGCATTTGGTTTAGCTATTTATGTAGCTGCTGTAAGCGAC---TCAGAA--------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------VKVGAVALPAFA---ADLQTSDVTGVTFWLVTAAMLAATVFFFVERDRVHG-KWKTSLSVAGLVTGVAFWHYLYMRGVWV----------ET-------GTSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-SV------------FWK-LLGASLVMLVVGFMGE---T------G--S----------------------------------NA------MVC-GIVATAAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTF---------------------GW---AIYPIGYWMGVG-------------DNP-DMAGANTIYNLADFINKIAFGLAIYVAAVSD-SE--------------------------------------- [IV-Gamma5-SAR86a]_1105128905538 [IV-Gamma5-SAR86a] JCVI_ORF_1105128905538_GS030_Warm_Seep_19m jcvi|1105128905538| 1105128905538 JCVI ORF 1105128905538 1105128905538 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 09-FEB-2004 Warm_Seep/19m_depth/S_n.a/GS030/Warm_seep/Roca_Redonda/Galapagos_Islands Red Sea marine 0.27222222 -91.63333 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGATATATGGTTCATATGAAAATGGGGGGAGTAAATTATTGCTCCACTACTTATATAAGGAGTTATATATGAAATTTTTATTAACACTCGCAGGCGTTCTCGCACTTCCTGCTTTTGCTGCTGACTTGCAGACAAGTGATATTACAGGAGTAACATTCTGGCTGGTAACAGCTGCTATGCTTGCTGCTACTGTATTTTTCTTTGTTGAAAGAGACAGAGTACACGGCAAATGGAAAACATCATTATCAGTTGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCACTATCTCTATATGAGAGGTGTTTGGGTAGAAACTGGAACATCGCCTACTGTATACAGATACATTGACTGGTTAATCACAGTACCACTTCAAATTATTGAGTTCTACTTAATTCTTAAAGTTTGTACTAACGTGGCATCAAGCGTATTTTGGAGACTTTTAGGAGCTTCATTAGTTATGCTTGTTGTTGGTTTCATGGGTGAAACTGGTTCAAATGCAATGGTATGCGGAATAGTGGCAACACTTGCATGGTTATATATCATATATGAAGTATTCTCTGGCGAAGCTGGAAAACTAAATGCTTCAAGTGGTAACGCTGCAGCACAAAGCGCATTTGGAACAATCAGATTGATTGTTACTTTTGGTTGGGCTATATATCCAATTGGATATTGGCTAGGCGCTATGGGTGGCGGTGATATGGCTGGTGCAAATACAATCTATAACCTTGCTGATTTTATTAACAAAATCGCATTTGGTTTAGCGATATATGTAGCTGCTGTAAGCGACTCAGAA MIYGSYENGGSKLLLHYLYKELYMKFLLTLAGVLALPAFAADLQTSDITGVTFWLVTAAMLAATVFFFVERDRVHGKWKTSLSVAGLVTGVAFWHYLYMRGVWVETGTSPTVYRYIDWLITVPLQIIEFYLILKVCTNVASSVFWRLLGASLVMLVVGFMGETGSNAMVCGIVATLAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTFGWAIYPIGYWLGAMGGGDMAGANTIYNLADFINKIAFGLAIYVAAVSDSE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGATATATGGTTCATATGAAAATGGGGGGAGTAAATTATTGCTCCACTACTTATATAAGGAGTTATATATGAAATTTTTATTAACACTCGCAGGCGTTCTCGCACTTCCTGCTTTTGCT---------GCTGACTTGCAGACAAGTGATATTACAGGAGTAACATTCTGGCTGGTAACAGCTGCTATGCTTGCTGCTACTGTATTTTTCTTTGTTGAAAGAGACAGAGTACACGGC---AAATGGAAAACATCATTATCAGTTGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCACTATCTCTATATGAGAGGTGTTTGGGTA------------------------------GAAACT---------------------GGAACATCGCCTACTGTATACAGATACATTGACTGG------------------------TTAATCACAGTACCACTTCAAATTATTGAGTTCTACTTAATTCTTAAAGTT---------TGT---ACTAACGTGGCATCA---AGCGTA------------------------------------TTTTGGAGA---CTTTTAGGAGCTTCATTAGTTATGCTTGTTGTTGGTTTCATGGGTGAA---------ACT------------------GGT------TCA------------------------------------------------------------------------------------------------------AATGCA------------------ATGGTATGC---GGAATAGTGGCAACACTTGCATGGTTATATATCATATATGAAGTA---------------TTC------TCT---GGCGAAGCTGGAAAACTAAATGCTTCA------AGT---GGTAACGCTGCAGCA---CAA---AGC---GCA---TTT---GGA---ACAATC---AGATTGATTGTTACTTTT---------------------------------------------------------------GGTTGG---------GCTATATATCCAATTGGATATTGGCTAGGCGCTATG---------------------------------------GGTGGCGGT---GATATGGCTGGTGCAAATACAATCTATAACCTTGCTGATTTTATTAACAAAATCGCATTTGGTTTAGCGATATATGTAGCTGCTGTAAGCGAC---TCAGAA--------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------MIYGSYENGGSKLLLHYLYKELYMKFLLTLAGVLALPAFA---ADLQTSDITGVTFWLVTAAMLAATVFFFVERDRVHG-KWKTSLSVAGLVTGVAFWHYLYMRGVWV----------ET-------GTSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVAS-SV------------FWR-LLGASLVMLVVGFMGE---T------G--S----------------------------------NA------MVC-GIVATLAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTF---------------------GW---AIYPIGYWLGAM-------------GGG-DMAGANTIYNLADFINKIAFGLAIYVAAVSD-SE--------------------------------------- [IV-Gamma5-SAR86a]_1105146921124 [IV-Gamma5-SAR86a] JCVI_ORF_1105146921124_GS031_Coastal_upwelling_12m jcvi|1105146921124| 1105146921124 JCVI ORF 1105146921124 1105146921124 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 10-FEB-2004 Coastal_upwelling/12m_depth/S_n.a/GS031/Upwelling/Fernandina_Island/Galapagos_Islands Pacific Ocean marine -0.3011111 -91.651665 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATTTTAAGATTTTGTATGATATATGGTTCATATGAAAATGGGGGGAGTAAATTATTGCTCCACTACTTATATAAGGAGTTATATATGAAATTTTTATTAACACTCGCAGGCGTTCTCGCACTTCCTGCTTTTGCTGCTGACTTGCAGACAAGTGATATTACAGGAGTAACATTCTGGCTGGTAACAGCTGCTATGCTTGCTGCTACTGTATTTTTCTTTGTTGAAAGAGACAGAGTACACGGCAAATGGAAAACATCATTATCAGTTGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCACTATCTCTATATGAGAGGTGTTTGGGTAGAAACTGGAACATCGCCTACTGTATACAGATACATTGACTGGTTAATCACAGTACCACTTCAAATTATTGAGTTCTACTTAATTCTTAAAGTTTGTACTAACGTGGCATCAAGCGTATTTTGGAGACTTTTAGGAGCTTCATTAGTTATGCTTGTTGTTGGTTTCATGGGTGAAACTGGTTCAAATGCAATGGTATGCGGAATAGTGGCAACACTTGCATGGTTATATATCATATATGAAGTATTCTCTGGCGAAGCTGGAAAACTAAATGCTTCAAGTGGTAACGCTGCAGCACAAAGCGCATTTGGAACAATCAGATTGATTGTTACTTTTGGTTGGGCTATATATCCAATTGGATATTGGCTAGGCGCTATGGGTGGCGGTGATATGGCTGGTGCAAATACAATCTATAACCTTGCTGATTTTATTAACAAAATCGCATTTGGTTTAGCGATATATGTAGCTGCTGTAAGCGACTCAGAA ILRFCMIYGSYENGGSKLLLHYLYKELYMKFLLTLAGVLALPAFAADLQTSDITGVTFWLVTAAMLAATVFFFVERDRVHGKWKTSLSVAGLVTGVAFWHYLYMRGVWVETGTSPTVYRYIDWLITVPLQIIEFYLILKVCTNVASSVFWRLLGASLVMLVVGFMGETGSNAMVCGIVATLAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTFGWAIYPIGYWLGAMGGGDMAGANTIYNLADFINKIAFGLAIYVAAVSDSE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAAGATTTTGTATGATATATGGTTCATATGAAAATGGGGGGAGTAAATTATTGCTCCACTACTTATATAAGGAGTTATATATGAAATTTTTATTAACACTCGCAGGCGTTCTCGCACTTCCTGCTTTTGCT---------GCTGACTTGCAGACAAGTGATATTACAGGAGTAACATTCTGGCTGGTAACAGCTGCTATGCTTGCTGCTACTGTATTTTTCTTTGTTGAAAGAGACAGAGTACACGGC---AAATGGAAAACATCATTATCAGTTGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCACTATCTCTATATGAGAGGTGTTTGGGTA------------------------------GAAACT---------------------GGAACATCGCCTACTGTATACAGATACATTGACTGG------------------------TTAATCACAGTACCACTTCAAATTATTGAGTTCTACTTAATTCTTAAAGTT---------TGT---ACTAACGTGGCATCA---AGCGTA------------------------------------TTTTGGAGA---CTTTTAGGAGCTTCATTAGTTATGCTTGTTGTTGGTTTCATGGGTGAA---------ACT------------------GGT------TCA------------------------------------------------------------------------------------------------------AATGCA------------------ATGGTATGC---GGAATAGTGGCAACACTTGCATGGTTATATATCATATATGAAGTA---------------TTC------TCT---GGCGAAGCTGGAAAACTAAATGCTTCA------AGT---GGTAACGCTGCAGCA---CAA---AGC---GCA---TTT---GGA---ACAATC---AGATTGATTGTTACTTTT---------------------------------------------------------------GGTTGG---------GCTATATATCCAATTGGATATTGGCTAGGCGCTATG---------------------------------------GGTGGCGGT---GATATGGCTGGTGCAAATACAATCTATAACCTTGCTGATTTTATTAACAAAATCGCATTTGGTTTAGCGATATATGTAGCTGCTGTAAGCGAC---TCAGAA--------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------ILRFCMIYGSYENGGSKLLLHYLYKELYMKFLLTLAGVLALPAFA---ADLQTSDITGVTFWLVTAAMLAATVFFFVERDRVHG-KWKTSLSVAGLVTGVAFWHYLYMRGVWV----------ET-------GTSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVAS-SV------------FWR-LLGASLVMLVVGFMGE---T------G--S----------------------------------NA------MVC-GIVATLAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTF---------------------GW---AIYPIGYWLGAM-------------GGG-DMAGANTIYNLADFINKIAFGLAIYVAAVSD-SE--------------------------------------- [IV-Gamma5-SAR86a]_1105127931276 [IV-Gamma5-SAR86a] JCVI_ORF_1105127931276_GS030_Warm_Seep_19m jcvi|1105127931276| 1105127931276 JCVI ORF 1105127931276 1105127931276 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 09-FEB-2004 Warm_Seep/19m_depth/S_n.a/GS030/Warm_seep/Roca_Redonda/Galapagos_Islands Red Sea marine 0.27222222 -91.63333 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGATATATGGTTCATATGAAAATGGGGGGAGTAAATTATTGCTCCACTACTTATATAAGGAGTTATATATGAAATTTTTATTAACACTCGCAGGCGTTCTCGCACTTCCTGCTTTTGCTGCTGACTTGCAGACAAGTGATATTACAGGAGTAACATTCTGGCTGGTAACAGCTGCTATGCTTGCTGCTACTGTATTTTTCTTTGTTGAAAGAGACAGAGTACACGGCAAATGGAAAACATCATTATCAGTTGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCACTATCTCTATATGAGAGGTGTTTGGGTAGAAACTGGAACATCGCCTACTGTATACAGATACATTGACTGGTTAATCACAGTACCACTTCAAATTATTGAGTTCTACTTAATTCTTAAAGTTTGTACTAACGTGGCATCAAGCGTATTTTGGAGACTTTTAGGAGCTTCATTAGTTATGCTTGTTGTTGGTTTCATGGGTGAAACTGGTTCAAATGCAATGGTATGCGGAATAGTGGCAACACTTGCATGGTTATATATCATATATGAAGTATTCTCTGGCGAAGCTGGAAAACTAAATGCTTCAAGTGGTAACGCTGCAGCACAAAGCGCATTTGGAACAATCAGATTGATTGTTACTTTTGGTTGGGCTATATATCCAATTGGATATTGGCTAGGCGCTATGGGTGGCGGTGATATGGCTGGTGCAAATACAATCTATAACCTTGCTGATTTTATTAACAAAATCGCATTTGGTTTAGCGATATATGTAGCTGCTGTAAGCGACTCAGAA MIYGSYENGGSKLLLHYLYKELYMKFLLTLAGVLALPAFAADLQTSDITGVTFWLVTAAMLAATVFFFVERDRVHGKWKTSLSVAGLVTGVAFWHYLYMRGVWVETGTSPTVYRYIDWLITVPLQIIEFYLILKVCTNVASSVFWRLLGASLVMLVVGFMGETGSNAMVCGIVATLAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTFGWAIYPIGYWLGAMGGGDMAGANTIYNLADFINKIAFGLAIYVAAVSDSE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGATATATGGTTCATATGAAAATGGGGGGAGTAAATTATTGCTCCACTACTTATATAAGGAGTTATATATGAAATTTTTATTAACACTCGCAGGCGTTCTCGCACTTCCTGCTTTTGCT---------GCTGACTTGCAGACAAGTGATATTACAGGAGTAACATTCTGGCTGGTAACAGCTGCTATGCTTGCTGCTACTGTATTTTTCTTTGTTGAAAGAGACAGAGTACACGGC---AAATGGAAAACATCATTATCAGTTGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCACTATCTCTATATGAGAGGTGTTTGGGTA------------------------------GAAACT---------------------GGAACATCGCCTACTGTATACAGATACATTGACTGG------------------------TTAATCACAGTACCACTTCAAATTATTGAGTTCTACTTAATTCTTAAAGTT---------TGT---ACTAACGTGGCATCA---AGCGTA------------------------------------TTTTGGAGA---CTTTTAGGAGCTTCATTAGTTATGCTTGTTGTTGGTTTCATGGGTGAA---------ACT------------------GGT------TCA------------------------------------------------------------------------------------------------------AATGCA------------------ATGGTATGC---GGAATAGTGGCAACACTTGCATGGTTATATATCATATATGAAGTA---------------TTC------TCT---GGCGAAGCTGGAAAACTAAATGCTTCA------AGT---GGTAACGCTGCAGCA---CAA---AGC---GCA---TTT---GGA---ACAATC---AGATTGATTGTTACTTTT---------------------------------------------------------------GGTTGG---------GCTATATATCCAATTGGATATTGGCTAGGCGCTATG---------------------------------------GGTGGCGGT---GATATGGCTGGTGCAAATACAATCTATAACCTTGCTGATTTTATTAACAAAATCGCATTTGGTTTAGCGATATATGTAGCTGCTGTAAGCGAC---TCAGAA--------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------MIYGSYENGGSKLLLHYLYKELYMKFLLTLAGVLALPAFA---ADLQTSDITGVTFWLVTAAMLAATVFFFVERDRVHG-KWKTSLSVAGLVTGVAFWHYLYMRGVWV----------ET-------GTSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVAS-SV------------FWR-LLGASLVMLVVGFMGE---T------G--S----------------------------------NA------MVC-GIVATLAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTF---------------------GW---AIYPIGYWLGAM-------------GGG-DMAGANTIYNLADFINKIAFGLAIYVAAVSD-SE--------------------------------------- [IV-Gamma5-SAR86a]_1105085010052 [IV-Gamma5-SAR86a] JCVI_ORF_1105085010052_GS035_Coastal_2m jcvi|1105085010052| 1105085010052 JCVI ORF 1105085010052 1105085010052 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 01-mars-04 Coastal/2m_depth/S_34.5_psu/GS035/Wolf_Island/Galapagos_Islands Pacific Ocean marine 1.3891667 -91.81695 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TTGCTCCACTACTTATATAAGGAGTTATATATGAAATTTTTATTAACACTCGCAGGCGTTCTCGCGCTTCCTGCTTTTGCTGCTGACTTGCAGACAAGTGATATTACAGGAGTAACATTCTGGCTGGTAACAGCAGCTATGCTTGCTGCTACTGTATTTTTCTTTGTTGAAAGAGACAGAGTACACGGCAAATGGAAGACATCATTATCAGTTGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCACTATCTTTATATGAGAGGTGTTTGGGTAGAAACTGGAACATCGCCTACTGTATACAGATACATTGACTGGTTAATCACAGTACCACTTCAAATTATTGAGTTCTACTTAATTCTTAAAGTATGTACTAACGTTGCATCAAGCGTATTTTGGAGACTTTTAGGGGCTTCATTAGTTATGCTTGTTGTTGGTTTCATGGGTGAAACTGGTTCAAATGCAATGGTATGCGGAATAGTGGCAACACTTGCATGGTTATATATCATTTATGAAGTATTCTCTGGCGAAGCTGGAAAACTAAATGCTTCAAGTGGTAATGCTGCAGCACAAAGCGCATTTGGAACAATCAGATTGATTGTTACTTTTGGTTGGGCTATATATCCAATTGGATATTGGCTAGGCGCTATGGGTGGCGGTGATATGGCTGGTGCAAATACAATCTATAACCTTGCTGATTTTATTAACAAAATCGCATTTGGTTTAGCGATATATGTAGCTGCTGTAAGCGACTCAGAA LLHYLYKELYMKFLLTLAGVLALPAFAADLQTSDITGVTFWLVTAAMLAATVFFFVERDRVHGKWKTSLSVAGLVTGVAFWHYLYMRGVWVETGTSPTVYRYIDWLITVPLQIIEFYLILKVCTNVASSVFWRLLGASLVMLVVGFMGETGSNAMVCGIVATLAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTFGWAIYPIGYWLGAMGGGDMAGANTIYNLADFINKIAFGLAIYVAAVSDSE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTCCACTACTTATATAAGGAGTTATATATGAAATTTTTATTAACACTCGCAGGCGTTCTCGCGCTTCCTGCTTTTGCT---------GCTGACTTGCAGACAAGTGATATTACAGGAGTAACATTCTGGCTGGTAACAGCAGCTATGCTTGCTGCTACTGTATTTTTCTTTGTTGAAAGAGACAGAGTACACGGC---AAATGGAAGACATCATTATCAGTTGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCACTATCTTTATATGAGAGGTGTTTGGGTA------------------------------GAAACT---------------------GGAACATCGCCTACTGTATACAGATACATTGACTGG------------------------TTAATCACAGTACCACTTCAAATTATTGAGTTCTACTTAATTCTTAAAGTA---------TGT---ACTAACGTTGCATCA---AGCGTA------------------------------------TTTTGGAGA---CTTTTAGGGGCTTCATTAGTTATGCTTGTTGTTGGTTTCATGGGTGAA---------ACT------------------GGT------TCA------------------------------------------------------------------------------------------------------AATGCA------------------ATGGTATGC---GGAATAGTGGCAACACTTGCATGGTTATATATCATTTATGAAGTA---------------TTC------TCT---GGCGAAGCTGGAAAACTAAATGCTTCA------AGT---GGTAATGCTGCAGCA---CAA---AGC---GCA---TTT---GGA---ACAATC---AGATTGATTGTTACTTTT---------------------------------------------------------------GGTTGG---------GCTATATATCCAATTGGATATTGGCTAGGCGCTATG---------------------------------------GGTGGCGGT---GATATGGCTGGTGCAAATACAATCTATAACCTTGCTGATTTTATTAACAAAATCGCATTTGGTTTAGCGATATATGTAGCTGCTGTAAGCGAC---TCAGAA--------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------LLHYLYKELYMKFLLTLAGVLALPAFA---ADLQTSDITGVTFWLVTAAMLAATVFFFVERDRVHG-KWKTSLSVAGLVTGVAFWHYLYMRGVWV----------ET-------GTSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVAS-SV------------FWR-LLGASLVMLVVGFMGE---T------G--S----------------------------------NA------MVC-GIVATLAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTF---------------------GW---AIYPIGYWLGAM-------------GGG-DMAGANTIYNLADFINKIAFGLAIYVAAVSD-SE--------------------------------------- [IV-Gamma5-SAR86a]_1105104502616 [IV-Gamma5-SAR86a] JCVI_ORF_1105104502616 jcvi|1105104502616| 1105104502616 JCVI ORF 1105104502616 1105104502616 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 10-FEB-2004 Coastal_upwelling/12m_depth/S_n.a/GS031/Upwelling/Fernandina_Island/Galapagos_Islands Pacific Ocean marine -0.3011111 -91.651665 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TTGTATCATAAGAGCTTGTATATTACGGGGGGGAGTAATTTTACTCCTACTTACTTATATAAGGAGTTATATATGAAACTTTTATTAACAATGGTTGGTGCTTTAGCACTGCCTGTTTTTGCAGCTGATCTAGATACAGCTGACATGACTGGCGTATCATTCTGGCTGGTAACAGCTGCAATGTTAGCTGCCACTGTTTTCTTCTTAGTAGAAAGAGACAGAGTTCATGGAAAATGGAAAACATCATTATCAGTTGCTGCTTTAGTTACTGGTATTGCTTTCTGGCATTATCTATATATGAGAGGTGTTTGGGTCGAATCTTACACCGGTCCGGGAACAGGAAGTTCTCCTACTGTATATAGATATATTGACTGGTTAATAACTGTGCCGCTTCAAATTATCGAATTCTATTTGATTCTTAAAGTGTGTACAAATGTTGGCTCAGGTCTATTCTGGAGACTACTTGGTGCGTCATTAGTGATGCTTGTTGGTGGTTTCATTGGAGAAACTGGCGGTAATGCAATGGTATGTGGTGTTATAGCAACACTTGCATGGTTGTACATTATCTACGAAGTATTTTCTGGCGAAGCTGGAAAACTCAATGCTTCTAGTGGTAATGCTGCAGCTCAAAGTGCATTTGGGAACAAT LYHKSLYITGGSNFTPTYLYKELYMKLLLTMVGALALPVFAADLDTADMTGVSFWLVTAAMLAATVFFLVERDRVHGKWKTSLSVAALVTGIAFWHYLYMRGVWVESYTGPGTGSSPTVYRYIDWLITVPLQIIEFYLILKVCTNVGSGLFWRLLGASLVMLVGGFIGETGGNAMVCGVIATLAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGNN ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTATCATAAGAGCTTGTATATTACGGGGGGGAGTAATTTTACTCCTACTTACTTATATAAGGAGTTATATATGAAACTTTTATTAACAATGGTTGGTGCTTTAGCACTGCCTGTTTTTGCA---------GCTGATCTAGATACAGCTGACATGACTGGCGTATCATTCTGGCTGGTAACAGCTGCAATGTTAGCTGCCACTGTTTTCTTCTTAGTAGAAAGAGACAGAGTTCATGGA---AAATGGAAAACATCATTATCAGTTGCTGCTTTAGTTACTGGTATTGCTTTCTGGCATTATCTATATATGAGAGGTGTTTGGGTC------------------------------GAATCT---TACACCGGTCCGGGAACAGGAAGTTCTCCTACTGTATATAGATATATTGACTGG------------------------TTAATAACTGTGCCGCTTCAAATTATCGAATTCTATTTGATTCTTAAAGTG---------TGT---ACAAATGTTGGCTCA---GGTCTA------------------------------------TTCTGGAGA---CTACTTGGTGCGTCATTAGTGATGCTTGTTGGTGGTTTCATTGGAGAA---------ACT------------------GGC------GGT------------------------------------------------------------------------------------------------------AATGCA------------------ATGGTATGT---GGTGTTATAGCAACACTTGCATGGTTGTACATTATCTACGAAGTA---------------TTT------TCT---GGCGAAGCTGGAAAACTCAATGCTTCT------AGT---GGTAATGCTGCAGCT---CAA---AGT---GCA---TTT---GGG---AACAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------LYHKSLYITGGSNFTPTYLYKELYMKLLLTMVGALALPVFA---ADLDTADMTGVSFWLVTAAMLAATVFFLVERDRVHG-KWKTSLSVAALVTGIAFWHYLYMRGVWV----------ES-YTGPGTGSSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVGS-GL------------FWR-LLGASLVMLVGGFIGE---T------G--G----------------------------------NA------MVC-GVIATLAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-NN--------------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_1105146906070 [IV-Gamma5-SAR86a] JCVI_ORF_1105146906070_GS023_Open_Ocean_2m jcvi|1105146906070| 1105146906070 JCVI ORF 1105146906070 1105146906070 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 21-janv-04 Open_Ocean/2m_depth/S_32.6_psu/GS023/30_miles_from_Cocos_Island/Eastern_Tropical_Pacific Pacific Ocean marine 5.64 -86.56528 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf CTGCCTGTTTTTGCAGCTGATCTAGATACAGCTGACATGACTGGCGTATCATTCTGGCTGGTAACAGCTGCAATGTTAGCTGCCACTGTTTTCTTCTTAGTAGAAAGAGACAGAGTTCATGGAAAATGGAAAACATCATTATCAGTTGCTGCTTTAGTTACTGGTATTGCTTTCTGGCATTATCTATATATGAGAGGTGTTTGGGTCGAATCTTACACCGGTCCGGGAACAGGAAGTTCTCCTACTGTATATAGATATATTGACTGGTTAATAACTGTGCCGCTTCAAATTATCGAATTCTATTTGATTCTTAAAGTGTGTACAAATGTTGGCTCAGGTCTATTCTGGAGACTACTTGGTGCGTCATTAGTGATGCTTGTTGGTGGTTTCATTGGAGAAACTGGCGGTAATGCAATGGTATGTGGTGTTATAGCAACACTTGCATGGTTGTACATTATCTACGAAGTATTTTCTGGCGAAGCTGGAAAACTCAATGCTTCTAGTGGTAATGCTGCAGCTCAAAGTGCATTTGGAACAATTAGATTAATTGTTACAGTTGGTTGGGCTATTTATCCAATTGGATATTGGCTAGCTACTGGTCCAGGAGCTGATATGGCTAATGCTAACTTAATCTATAACCTTGCTGATTTTATTAACAAAATCGCGTTTGGTTTAGCTATTTATGTAGCAGCGGTCAGCGACTCAGAA LPVFAADLDTADMTGVSFWLVTAAMLAATVFFLVERDRVHGKWKTSLSVAALVTGIAFWHYLYMRGVWVESYTGPGTGSSPTVYRYIDWLITVPLQIIEFYLILKVCTNVGSGLFWRLLGASLVMLVGGFIGETGGNAMVCGVIATLAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYPIGYWLATGPGADMANANLIYNLADFINKIAFGLAIYVAAVSDSE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCCTGTTTTTGCA---------GCTGATCTAGATACAGCTGACATGACTGGCGTATCATTCTGGCTGGTAACAGCTGCAATGTTAGCTGCCACTGTTTTCTTCTTAGTAGAAAGAGACAGAGTTCATGGA---AAATGGAAAACATCATTATCAGTTGCTGCTTTAGTTACTGGTATTGCTTTCTGGCATTATCTATATATGAGAGGTGTTTGGGTC------------------------------GAATCT---TACACCGGTCCGGGAACAGGAAGTTCTCCTACTGTATATAGATATATTGACTGG------------------------TTAATAACTGTGCCGCTTCAAATTATCGAATTCTATTTGATTCTTAAAGTG---------TGT---ACAAATGTTGGCTCA---GGTCTA------------------------------------TTCTGGAGA---CTACTTGGTGCGTCATTAGTGATGCTTGTTGGTGGTTTCATTGGAGAA---------ACT------------------GGC------GGT------------------------------------------------------------------------------------------------------AATGCA------------------ATGGTATGT---GGTGTTATAGCAACACTTGCATGGTTGTACATTATCTACGAAGTA---------------TTT------TCT---GGCGAAGCTGGAAAACTCAATGCTTCT------AGT---GGTAATGCTGCAGCT---CAA---AGT---GCA---TTT---GGA---ACAATT---AGATTAATTGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCAATTGGATATTGGCTAGCTACTGGT---------------------------------------CCAGGAGCT---GATATGGCTAATGCTAACTTAATCTATAACCTTGCTGATTTTATTAACAAAATCGCGTTTGGTTTAGCTATTTATGTAGCAGCGGTCAGCGAC---TCAGAA--------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------LPVFA---ADLDTADMTGVSFWLVTAAMLAATVFFLVERDRVHG-KWKTSLSVAALVTGIAFWHYLYMRGVWV----------ES-YTGPGTGSSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVGS-GL------------FWR-LLGASLVMLVGGFIGE---T------G--G----------------------------------NA------MVC-GVIATLAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYPIGYWLATG-------------PGA-DMANANLIYNLADFINKIAFGLAIYVAAVSD-SE--------------------------------------- [IV-Gamma5-SAR86a]_EU915818 [IV-Gamma5-SAR86a] PF92057_env_samples_EU915818 gi|229358518|gb|EU915818| Uncultured microorganism clone PF92057 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF92057 putative proteorhodopsin gene, partial cds EU915818 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTAGCCGCTACTGTGTTCTTCTTAGTAGAAAGAGACAGAGTTCATGGTAAATGGAAAACATCATTATCAGTTGCTGCTTTAGTTACTGGTATTGCTTTCTGGCATTATCTATATATGAGAGGTGTATGGGTTGAATCTTACACTGGTCCGGGAACAGGAAGTTCTCCTACTGTATATAGATACATTGACTGGTTAATAACTGTGCCACTTCAAATTATCGAATTCTATTTGATTCTTAAGGTGTGTACAAATGTTGGCTCAGGTCTATTCTGGAGACTACTTGGTGCGTCATTAGTGATGCTAGTTGGTGGTTTCATAGGAGAAACTGGCGGTAATGCAATGGTATGTGGTGTTATAGCAACACTTGCATGGTTGTACATTATCTATGAAGTATTTTCTGGTGAAGCTGGAAAACTCAATGCTTCTAGTGGTAATGCTGCGGCTCAAAGTGCATTTGGAACAATTAGATTAATTGTTACAGTTGGTTGGGCCATCTAC MVAATVFFLVERDRVHGKWKTSLSVAALVTGIAFWHYLYMRGVWVESYTGPGTGSSPTVYRYIDWLITVPLQIIEFYLILKVCTNVGSGLFWRLLGASLVMLVGGFIGETGGNAMVCGVIATLAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTGTTCTTCTTAGTAGAAAGAGACAGAGTTCATGGT---AAATGGAAAACATCATTATCAGTTGCTGCTTTAGTTACTGGTATTGCTTTCTGGCATTATCTATATATGAGAGGTGTATGGGTT------------------------------GAATCT---TACACTGGTCCGGGAACAGGAAGTTCTCCTACTGTATATAGATACATTGACTGG------------------------TTAATAACTGTGCCACTTCAAATTATCGAATTCTATTTGATTCTTAAGGTG---------TGT---ACAAATGTTGGCTCA---GGTCTA------------------------------------TTCTGGAGA---CTACTTGGTGCGTCATTAGTGATGCTAGTTGGTGGTTTCATAGGAGAA---------ACT------------------GGC------GGT------------------------------------------------------------------------------------------------------AATGCA------------------ATGGTATGT---GGTGTTATAGCAACACTTGCATGGTTGTACATTATCTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTCAATGCTTCT------AGT---GGTAATGCTGCGGCT---CAA---AGT---GCA---TTT---GGA---ACAATT---AGATTAATTGTTACAGTT---------------------------------------------------------------GGTTGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFLVERDRVHG-KWKTSLSVAALVTGIAFWHYLYMRGVWV----------ES-YTGPGTGSSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVGS-GL------------FWR-LLGASLVMLVGGFIGE---T------G--G----------------------------------NA------MVC-GVIATLAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_AY552545 [IV-Gamma5-SAR86a] Gammaproteobacteria_EBAC20E09_clone_EBAC20E09_complete_AY552545 gi|83629191|gb|AY552545| Uncultured marine gamma proteobacterium EBAC20E09 clone EBAC20E09, complete sequence Uncultured marine gamma proteobacterium EBAC20E09 clone EBAC20E09, complete sequence AY552545 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/Proteobacteria/Gammaproteobacteria/SAR86 cluster/environmental samples] taxon:266134 genomic_DNA other 14DEC2005 #na seawater Red Sea marine 29.5 34.92 Different SAR86 subgroups harbour divergent proteorhodopsins Sabehi,G., Beja,O., Suzuki,M.T., Preston,C.M. and DeLong,E.F. Environ. Microbiol. 6 (9), 903910 (2004) 15305915 #na ATGAAACTTTTATTAACAATGGTTGGTGCTTTAGCGCTGCCTGTTTTTGCAGCTGATCTAGATACAGCTGACATGACTGGTGTTTCATTCTGGCTGGTAACAGCTGCAATGTTAGCTGCCACTGTTTTCTTCTTAGTAGAAAGAGACAGAGTTCATGGTAAATGGAAAACATCATTATCAGTTGCTGCTTTGGTTACTGGTATTGCTTTCTGGCATTATCTATATATGAGAGGTGTATGGGTAGAATCTTACACTGGTCCGGGAACAGGAAGTTCTCCTACTGTATATAGATATATTGACTGGTTAATAACTGTACCACTTCAAATTATCGAATTCTATTTGATTCTTAAGGTGTGTACAAATGTTGGCTCAGGTCTATTCTGGAGACTACTTGGTGCGTCATTAGTGATGCTCGTTGGTGGTTTCATAGGAGAAACTGGCGGTAATGCAATGGTATGTGGTGTTATAGCAACACTTGCATGGTTGTACATTATCTATGAAGTATTTTCTGGTGAAGCTGGAAAACTCAATGCTTCTAGTGGTAATGCTGCGGCTCAAAGTGCGTTTGGAACAATTAGACTAATTGTTACAGTTGGTTGGGCTATTTATCCAATTGGATATTGGCTAGCTACTGGTCCAGGAGCTGATATGGCTAATGCTAACTTAATCTATAACCTTGCTGATTTTATTAACAAAATCGCATTTGGTTTAGCTATTTATGTAGCAGCAGTCAGCGATTCAGAA MKLLLTMVGALALPVFAADLDTADMTGVSFWLVTAAMLAATVFFLVERDRVHGKWKTSLSVAALVTGIAFWHYLYMRGVWVESYTGPGTGSSPTVYRYIDWLITVPLQIIEFYLILKVCTNVGSGLFWRLLGASLVMLVGGFIGETGGNAMVCGVIATLAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYPIGYWLATGPGADMANANLIYNLADFINKIAFGLAIYVAAVSDSE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAACTTTTATTAACAATGGTTGGTGCTTTAGCGCTGCCTGTTTTTGCA---------GCTGATCTAGATACAGCTGACATGACTGGTGTTTCATTCTGGCTGGTAACAGCTGCAATGTTAGCTGCCACTGTTTTCTTCTTAGTAGAAAGAGACAGAGTTCATGGT---AAATGGAAAACATCATTATCAGTTGCTGCTTTGGTTACTGGTATTGCTTTCTGGCATTATCTATATATGAGAGGTGTATGGGTA------------------------------GAATCT---TACACTGGTCCGGGAACAGGAAGTTCTCCTACTGTATATAGATATATTGACTGG------------------------TTAATAACTGTACCACTTCAAATTATCGAATTCTATTTGATTCTTAAGGTG---------TGT---ACAAATGTTGGCTCA---GGTCTA------------------------------------TTCTGGAGA---CTACTTGGTGCGTCATTAGTGATGCTCGTTGGTGGTTTCATAGGAGAA---------ACT------------------GGC------GGT------------------------------------------------------------------------------------------------------AATGCA------------------ATGGTATGT---GGTGTTATAGCAACACTTGCATGGTTGTACATTATCTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTCAATGCTTCT------AGT---GGTAATGCTGCGGCT---CAA---AGT---GCG---TTT---GGA---ACAATT---AGACTAATTGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCAATTGGATATTGGCTAGCTACTGGT---------------------------------------CCAGGAGCT---GATATGGCTAATGCTAACTTAATCTATAACCTTGCTGATTTTATTAACAAAATCGCATTTGGTTTAGCTATTTATGTAGCAGCAGTCAGCGAT---TCAGAA--------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------MKLLLTMVGALALPVFA---ADLDTADMTGVSFWLVTAAMLAATVFFLVERDRVHG-KWKTSLSVAALVTGIAFWHYLYMRGVWV----------ES-YTGPGTGSSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVGS-GL------------FWR-LLGASLVMLVGGFIGE---T------G--G----------------------------------NA------MVC-GVIATLAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYPIGYWLATG-------------PGA-DMANANLIYNLADFINKIAFGLAIYVAAVSD-SE--------------------------------------- [IV-Gamma5-SAR86a]_1105119713882 [IV-Gamma5-SAR86a] JCVI_ORF_1105119713882_GS030_Warm_Seep_19m jcvi|1105119713882| 1105119713882 JCVI ORF 1105119713882 1105119713882 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 09-FEB-2004 Warm_Seep/19m_depth/S_n.a/GS030/Warm_seep/Roca_Redonda/Galapagos_Islands Red Sea marine 0.27222222 -91.63333 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TACGCGCATCGAGTTATATATGAACTTTTATTAACAATGGTTGGTGCTTTAGCACTGCCTGTTTTTGCAGCTGATCTAGATACAGCTGACATGACTGGCGTATCATTCTGGCTGGTAACAGCTGCAATGTTAGCTGCCACTGTTTTCTTCTTAGTAGAAAGAGACAGAGTTCATGGTAAATGGAAAACATCATTATCAGTTGCTGCTTTAGTTACTGGTATTGCTTTCTGGCATTATCTATATATGAGAGGTGTATGGGTCGAATCTTACACTGGTCCGGGAACAGGAAGTTCTCCTACTGTATATAGATATATTGACTGGTTAATAACTGTACCACTTCAAATTATCGAATTCTATTTGATTCTTAAGGTGTGTACAAATGTTGGCTCAGGTCTATTCTGGAGACTACTTGGTGCGTCACTAGTGATGCTTGTTGGTGGTTTCATAGGAGAAACTGGCGGTAATGCAATGGTATGTGGTGTCATAGCAACACTTGCATGGTTATACATTATCTATGAAGTATTTTCTGGTGAAGCTGGAAAACTCAATGCTTCTAGTGGTAATGCTGCGGCTCAAAGTGCGTTTGGAACAATTAGATTAATTGTTACAGTTGGTTGGGCTATTTATCCAATTGGATATTGGCTAGCTACTGGTCCAGGAGCTGATATGGCTAATGCTAACTTAATCTATAACCTTGCTGATTTTATTAACAAAATCGCATTTGGTTTAGCTATTTATGTAGCAGCGGTCAGCGACTCAGAA YAHRVIYELLLTMVGALALPVFAADLDTADMTGVSFWLVTAAMLAATVFFLVERDRVHGKWKTSLSVAALVTGIAFWHYLYMRGVWVESYTGPGTGSSPTVYRYIDWLITVPLQIIEFYLILKVCTNVGSGLFWRLLGASLVMLVGGFIGETGGNAMVCGVIATLAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYPIGYWLATGPGADMANANLIYNLADFINKIAFGLAIYVAAVSDSE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACGCGCATCGAGTTATATATGAACTTTTATTAACAATGGTTGGTGCTTTAGCACTGCCTGTTTTTGCA---------GCTGATCTAGATACAGCTGACATGACTGGCGTATCATTCTGGCTGGTAACAGCTGCAATGTTAGCTGCCACTGTTTTCTTCTTAGTAGAAAGAGACAGAGTTCATGGT---AAATGGAAAACATCATTATCAGTTGCTGCTTTAGTTACTGGTATTGCTTTCTGGCATTATCTATATATGAGAGGTGTATGGGTC------------------------------GAATCT---TACACTGGTCCGGGAACAGGAAGTTCTCCTACTGTATATAGATATATTGACTGG------------------------TTAATAACTGTACCACTTCAAATTATCGAATTCTATTTGATTCTTAAGGTG---------TGT---ACAAATGTTGGCTCA---GGTCTA------------------------------------TTCTGGAGA---CTACTTGGTGCGTCACTAGTGATGCTTGTTGGTGGTTTCATAGGAGAA---------ACT------------------GGC------GGT------------------------------------------------------------------------------------------------------AATGCA------------------ATGGTATGT---GGTGTCATAGCAACACTTGCATGGTTATACATTATCTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTCAATGCTTCT------AGT---GGTAATGCTGCGGCT---CAA---AGT---GCG---TTT---GGA---ACAATT---AGATTAATTGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCAATTGGATATTGGCTAGCTACTGGT---------------------------------------CCAGGAGCT---GATATGGCTAATGCTAACTTAATCTATAACCTTGCTGATTTTATTAACAAAATCGCATTTGGTTTAGCTATTTATGTAGCAGCGGTCAGCGAC---TCAGAA--------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------YAHRVIYELLLTMVGALALPVFA---ADLDTADMTGVSFWLVTAAMLAATVFFLVERDRVHG-KWKTSLSVAALVTGIAFWHYLYMRGVWV----------ES-YTGPGTGSSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVGS-GL------------FWR-LLGASLVMLVGGFIGE---T------G--G----------------------------------NA------MVC-GVIATLAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYPIGYWLATG-------------PGA-DMANANLIYNLADFINKIAFGLAIYVAAVSD-SE--------------------------------------- [IV-Gamma5-SAR86a]_1105129844736 [IV-Gamma5-SAR86a] JCVI_ORF_1105129844736 jcvi|1105129844736| 1105129844736 JCVI ORF 1105129844736 1105129844736 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.22_0.8 other #na 25-FEB-2003 Open_Ocean/5m_depth/S_36.7_psu/GS000c/Sargasso_Stations_3/Sargasso_Sea Sargasso Sea marine 32.174835 -64.01017 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TTGTATTATATGGACTTGTATATTACGGGGGGGAGTGATTTTACTCCTACTTACTTATATAAGGAGTTATATATGAAACTTTTATTAACAATGGTTGGTGCTTTAGCACTGCCTGTTTTTGCAGCTGATCTAGATACAGCTGACATGACTGGTGTATCATTCTGGCTGGTAACAGCTGCGATGTTAGCTGCCACTGTTTTCTTCTTAGTAGAAAGAGACAGAGTTCATGGTAAATGGAAAACATCATTATCAGTTGCTGCTTTAGTTACTGGTATTGCTTTCTGGCATTATCTATATATGAGAGGTGTATGGGTCGAATCTTACACTGGTCCGGGAACAGGTAGTTCTCCTACTGTATATAGATATATTGACTGGTTAATAACTGTACCACTTCAAATTATCGAATTCTATTTGATTCTTAAGGTGTGTACAAATGTTGGCTCAGGTCTATTCTGGAGACTACTTGGTGCATCATTAGTGATGCTTGTTGGTGGTTTCATAGGAGAAACTGGCGGTAATGCAATGGTATGTGGTGTTATAGCAACACTTGCATGGTTGTACATTATCTATGAAGTATTTTCTGGTGAAGCTGGAAAACTCAATGCTTCTAGTGGTAATGCTGCGGCTCAAAGTGCGTTTGGAACAATTAGATTAATTGTTACAGTTGGTTGGGCTATTTATCCAATTGGATATTGGCTAGCTACTGGTCCAGGAGCCGATATGGCTAATGCTAACTTGATCTATAAC LYYMDLYITGGSDFTPTYLYKELYMKLLLTMVGALALPVFAADLDTADMTGVSFWLVTAAMLAATVFFLVERDRVHGKWKTSLSVAALVTGIAFWHYLYMRGVWVESYTGPGTGSSPTVYRYIDWLITVPLQIIEFYLILKVCTNVGSGLFWRLLGASLVMLVGGFIGETGGNAMVCGVIATLAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYPIGYWLATGPGADMANANLIYN ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTATTATATGGACTTGTATATTACGGGGGGGAGTGATTTTACTCCTACTTACTTATATAAGGAGTTATATATGAAACTTTTATTAACAATGGTTGGTGCTTTAGCACTGCCTGTTTTTGCA---------GCTGATCTAGATACAGCTGACATGACTGGTGTATCATTCTGGCTGGTAACAGCTGCGATGTTAGCTGCCACTGTTTTCTTCTTAGTAGAAAGAGACAGAGTTCATGGT---AAATGGAAAACATCATTATCAGTTGCTGCTTTAGTTACTGGTATTGCTTTCTGGCATTATCTATATATGAGAGGTGTATGGGTC------------------------------GAATCT---TACACTGGTCCGGGAACAGGTAGTTCTCCTACTGTATATAGATATATTGACTGG------------------------TTAATAACTGTACCACTTCAAATTATCGAATTCTATTTGATTCTTAAGGTG---------TGT---ACAAATGTTGGCTCA---GGTCTA------------------------------------TTCTGGAGA---CTACTTGGTGCATCATTAGTGATGCTTGTTGGTGGTTTCATAGGAGAA---------ACT------------------GGC------GGT------------------------------------------------------------------------------------------------------AATGCA------------------ATGGTATGT---GGTGTTATAGCAACACTTGCATGGTTGTACATTATCTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTCAATGCTTCT------AGT---GGTAATGCTGCGGCT---CAA---AGT---GCG---TTT---GGA---ACAATT---AGATTAATTGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCAATTGGATATTGGCTAGCTACTGGT---------------------------------------CCAGGAGCC---GATATGGCTAATGCTAACTTGATCTATAAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------LYYMDLYITGGSDFTPTYLYKELYMKLLLTMVGALALPVFA---ADLDTADMTGVSFWLVTAAMLAATVFFLVERDRVHG-KWKTSLSVAALVTGIAFWHYLYMRGVWV----------ES-YTGPGTGSSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVGS-GL------------FWR-LLGASLVMLVGGFIGE---T------G--G----------------------------------NA------MVC-GVIATLAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYPIGYWLATG-------------PGA-DMANANLIYN--------------------------------------------------------------- [IV-Gamma5-SAR86a]_1105086221188 [IV-Gamma5-SAR86a] JCVI_ORF_1105086221188_GS000c_Open_Ocean_5m jcvi|1105086221188| 1105086221188 JCVI ORF 1105086221188 1105086221188 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.22_0.8 other #na 25-FEB-2003 Open_Ocean/5m_depth/S_36.7_psu/GS000c/Sargasso_Stations_3/Sargasso_Sea Sargasso Sea marine 32.174835 -64.01017 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TTGTATCATAAGAGCTTGTATATTACGGGGGGGAGTAATTTTACTCCTACTTACTTATATAAGGAGTTATATATGAAACTTTTATTAACAATGGTTGGTGCTTTAGCACTGCCTGTTTTTGCAGCTGATCTAGATACAGCTGACATGACTGGCGTATCATTCTGGCTGGTAACAGCTGCAATGTTAGCTGCCACTGTTTTCTTCTTAGTAGAAAGAGACAGAGTTCATGGAAAATGGAAAACATCATTATCAGTTGCTGCTTTAGTTACTGGTATTGCTTTCTGGCATTATCTATATATGAGAGGTGTTTGGGTCGAATCTTACACCGGTCCGGGAACAGGAAGTTCTCCTACTGTATATAGATATATTGATTGGTTGATCACTGTGCCACTTCAAATTATTGAGTTCTACTTGATTCTTAAAGTGTGTACAAATGTTGGCTCAGGTCTATTCTGGAGACTACTTGGTGCATCATTAGTGATGCTTGTTTGTGGTTTTATAGGAGAAACTACTGGAGCTGCAAATGCAATGGTATGGGGTGTTATAGCAACACTTGCATGGTTGTACATTATCTATGAAGTATTTTCTGGCGAAGCTGGAAAACTCAATGCTTCAAGCGGGAATGCTGCAGCTCAAAGTGCATTTGGAACAATTAGATTAATTGTTACAGTTGGTTGGGCTATTTATCCAATTGGATATTGGGTAGCTACTGGTCCAGGAGCTGATATGGCTAATGCTAACTTAATCTATAACCTTGCTGATTTTATTAACAAAATCGCATTTGGTTTAGCTATTTATGTAGCAGCGGTCAGCGACTCAGAA LYHKSLYITGGSNFTPTYLYKELYMKLLLTMVGALALPVFAADLDTADMTGVSFWLVTAAMLAATVFFLVERDRVHGKWKTSLSVAALVTGIAFWHYLYMRGVWVESYTGPGTGSSPTVYRYIDWLITVPLQIIEFYLILKVCTNVGSGLFWRLLGASLVMLVCGFIGETTGAANAMVWGVIATLAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYPIGYWVATGPGADMANANLIYNLADFINKIAFGLAIYVAAVSDSE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTATCATAAGAGCTTGTATATTACGGGGGGGAGTAATTTTACTCCTACTTACTTATATAAGGAGTTATATATGAAACTTTTATTAACAATGGTTGGTGCTTTAGCACTGCCTGTTTTTGCA---------GCTGATCTAGATACAGCTGACATGACTGGCGTATCATTCTGGCTGGTAACAGCTGCAATGTTAGCTGCCACTGTTTTCTTCTTAGTAGAAAGAGACAGAGTTCATGGA---AAATGGAAAACATCATTATCAGTTGCTGCTTTAGTTACTGGTATTGCTTTCTGGCATTATCTATATATGAGAGGTGTTTGGGTC------------------------------GAATCT---TACACCGGTCCGGGAACAGGAAGTTCTCCTACTGTATATAGATATATTGATTGG------------------------TTGATCACTGTGCCACTTCAAATTATTGAGTTCTACTTGATTCTTAAAGTG---------TGT---ACAAATGTTGGCTCA---GGTCTA------------------------------------TTCTGGAGA---CTACTTGGTGCATCATTAGTGATGCTTGTTTGTGGTTTTATAGGAGAA---------ACT------------------ACT------GGA------------------------------GCTGCA------------------------------------------------------------------AATGCA------------------ATGGTATGG---GGTGTTATAGCAACACTTGCATGGTTGTACATTATCTATGAAGTA---------------TTT------TCT---GGCGAAGCTGGAAAACTCAATGCTTCA------AGC---GGGAATGCTGCAGCT---CAA---AGT---GCA---TTT---GGA---ACAATT---AGATTAATTGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCAATTGGATATTGGGTAGCTACTGGT---------------------------------------CCAGGAGCT---GATATGGCTAATGCTAACTTAATCTATAACCTTGCTGATTTTATTAACAAAATCGCATTTGGTTTAGCTATTTATGTAGCAGCGGTCAGCGAC---TCAGAA--------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------LYHKSLYITGGSNFTPTYLYKELYMKLLLTMVGALALPVFA---ADLDTADMTGVSFWLVTAAMLAATVFFLVERDRVHG-KWKTSLSVAALVTGIAFWHYLYMRGVWV----------ES-YTGPGTGSSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVGS-GL------------FWR-LLGASLVMLVCGFIGE---T------T--G----------AA----------------------NA------MVW-GVIATLAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYPIGYWVATG-------------PGA-DMANANLIYNLADFINKIAFGLAIYVAAVSD-SE--------------------------------------- [IV-Gamma5-SAR86a]_1105136130020 [IV-Gamma5-SAR86a] JCVI_ORF_1105136130020_GS000d_Open_Ocean_5m jcvi|1105136130020| 1105136130020 JCVI ORF 1105136130020 1105136130020 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.22_0.8 other #na 26-FEB-2003 Open_Ocean/5m_depth/S_36.6_psu/GS000d/Sargasso_Station_13/Sargasso_Sea Sargasso Sea marine 31.175 -64.32433 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TTGTATCATAAGAGCTTGTATATTACGGGGGGGAGTAATTTTACTCCTACTTACTTATATAAGGAGTTATATATGAAACTTTTATTAACAATGGTTGGTGCTTTAGCACTGCCTGTTTTTGCAGCTGATCTAGATACAGCTGACATGACTGGCGTATCATTCTGGCTGGTAACAGCTGCAATGTTAGCTGCCACTGTTTTCTTCTTAGTAGAAAGAGACAGAGTTCATGGAAAATGGAAAACATCATTATCAGTTGCTGCTTTAGTTACTGGTATTGCTTTCTGGCATTATCTATATATGAGAGGTGTTTGGGTCGAATCTTACACCGGTCCTGGAACAGGAAGTTCTCCTACTGTATATAGATATATTGATTGGTTGATCACTGTGCCACTTCAAATTATTGAGTTCTACTTGATTCTTAAAGTGTGTACAAATGTTGGCTCAGGTCTATTCTGGAGACTACTTGGTGCATCATTAGTGATGCTTGTTTGTGGTTTTATAGGAGAAACTACTGGAGCTGCAAATGCAATGGTATGGGGTGTTATAGCAACACTTGCATGGTTGTACATTATCTATGAAGTATTTTCTGGCGAAGCTGGAAAACTCAATGCTTCAAGTGGGAATGCTGCAGCTCAAAGTGCATTTGGAACAATTAGATTAATTGTTACAGTTGGTTGGGCTATTTATCCAATTGGATATTGGGTAGCTACTGGTCCACGAGCTGATATGGCTAATGCTAACTTAATCTATAACCTTGCTGATTTTATTAACAAAATCCCATTTGGTTTAACTATTTATGTAGCACCGGTCAGCGACTCAAAA LYHKSLYITGGSNFTPTYLYKELYMKLLLTMVGALALPVFAADLDTADMTGVSFWLVTAAMLAATVFFLVERDRVHGKWKTSLSVAALVTGIAFWHYLYMRGVWVESYTGPGTGSSPTVYRYIDWLITVPLQIIEFYLILKVCTNVGSGLFWRLLGASLVMLVCGFIGETTGAANAMVWGVIATLAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYPIGYWVATGPRADMANANLIYNLADFINKIPFGLTIYVAPVSDSK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTATCATAAGAGCTTGTATATTACGGGGGGGAGTAATTTTACTCCTACTTACTTATATAAGGAGTTATATATGAAACTTTTATTAACAATGGTTGGTGCTTTAGCACTGCCTGTTTTTGCA---------GCTGATCTAGATACAGCTGACATGACTGGCGTATCATTCTGGCTGGTAACAGCTGCAATGTTAGCTGCCACTGTTTTCTTCTTAGTAGAAAGAGACAGAGTTCATGGA---AAATGGAAAACATCATTATCAGTTGCTGCTTTAGTTACTGGTATTGCTTTCTGGCATTATCTATATATGAGAGGTGTTTGGGTC------------------------------GAATCT---TACACCGGTCCTGGAACAGGAAGTTCTCCTACTGTATATAGATATATTGATTGG------------------------TTGATCACTGTGCCACTTCAAATTATTGAGTTCTACTTGATTCTTAAAGTG---------TGT---ACAAATGTTGGCTCA---GGTCTA------------------------------------TTCTGGAGA---CTACTTGGTGCATCATTAGTGATGCTTGTTTGTGGTTTTATAGGAGAA---------ACT------------------ACT------GGA------------------------------GCTGCA------------------------------------------------------------------AATGCA------------------ATGGTATGG---GGTGTTATAGCAACACTTGCATGGTTGTACATTATCTATGAAGTA---------------TTT------TCT---GGCGAAGCTGGAAAACTCAATGCTTCA------AGT---GGGAATGCTGCAGCT---CAA---AGT---GCA---TTT---GGA---ACAATT---AGATTAATTGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCAATTGGATATTGGGTAGCTACTGGT---------------------------------------CCACGAGCT---GATATGGCTAATGCTAACTTAATCTATAACCTTGCTGATTTTATTAACAAAATCCCATTTGGTTTAACTATTTATGTAGCACCGGTCAGCGAC---TCAAAA--------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------LYHKSLYITGGSNFTPTYLYKELYMKLLLTMVGALALPVFA---ADLDTADMTGVSFWLVTAAMLAATVFFLVERDRVHG-KWKTSLSVAALVTGIAFWHYLYMRGVWV----------ES-YTGPGTGSSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVGS-GL------------FWR-LLGASLVMLVCGFIGE---T------T--G----------AA----------------------NA------MVW-GVIATLAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYPIGYWVATG-------------PRA-DMANANLIYNLADFINKIPFGLTIYVAPVSD-SK--------------------------------------- [IV-Gamma5-SAR86a]_1112717156923 [IV-Gamma5-SAR86a] JCVI_ORF_1112717156923 jcvi|1112717156923| 1112717156923 JCVI ORF 1112717156923 1112717156923 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 08-AUG-2005 Open_Ocean/2m_depth/S_32.5_psu/GS112a/Indian_Ocean/Indian_Ocean Indian Ocean marine -8.505 80.37556 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TACTTATATAAGGAGTTATATATGAAACTTTTATTAACAATGGTTGGTGCTTTAGCACTGCCTGTTTTTGCAGCCGATCTTGATGTAAATGACATGACTGGCATATCATTCTGGCTGGTAACAGCTGCAATGTTAGCGTCGACTGTTTTCTTCTTAGTAGAAAGAGACAGAGTTCATGGTAAATGGAAAACATCATTATCAGTTGCTGCCTTAGTTACTGGTATTGCTTTCTGGCATTACCTATATATGAGAGGCGTTTGGGTTGAAACACAAACATCACCTACTGTATATAGATATATTGACTGGTTAATAACTGTACCACTTCAAATTATTGAGTTCTACTTGATACTTAAAGTGTGTACAAATGTTGGCTCAGGTCTATTCTGGAAACTACTTGGTGCATCATTAGTGATGTTAGTAGGTGGTTTCATGGGTGAAACTGGATTTGATCCAGTGATTTGTGGTGTTATAGCAACACTAGCTTGGTTGTACATTATCTATGAAATATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGAAATGCTGCAGCCCAAAGCGCATTTGGAACAATTAGATTAATTGTTACAGTTGGTTGGGCTATTTATCCAATTGGATATTGGCTAGCTACTGTCCAGGAGCTG YLYKELYMKLLLTMVGALALPVFAADLDVNDMTGISFWLVTAAMLASTVFFLVERDRVHGKWKTSLSVAALVTGIAFWHYLYMRGVWVETQTSPTVYRYIDWLITVPLQIIEFYLILKVCTNVGSGLFWKLLGASLVMLVGGFMGETGFDPVICGVIATLAWLYIIYEIFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYPIGYWLATVQEL ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACTTATATAAGGAGTTATATATGAAACTTTTATTAACAATGGTTGGTGCTTTAGCACTGCCTGTTTTTGCA---------GCCGATCTTGATGTAAATGACATGACTGGCATATCATTCTGGCTGGTAACAGCTGCAATGTTAGCGTCGACTGTTTTCTTCTTAGTAGAAAGAGACAGAGTTCATGGT---AAATGGAAAACATCATTATCAGTTGCTGCCTTAGTTACTGGTATTGCTTTCTGGCATTACCTATATATGAGAGGCGTTTGGGTT------------------------------GAAACA---------------------CAAACATCACCTACTGTATATAGATATATTGACTGG------------------------TTAATAACTGTACCACTTCAAATTATTGAGTTCTACTTGATACTTAAAGTG---------TGT---ACAAATGTTGGCTCA---GGTCTA------------------------------------TTCTGGAAA---CTACTTGGTGCATCATTAGTGATGTTAGTAGGTGGTTTCATGGGTGAA---------ACT------------------GGA------TTT------------------------------------------------------------------------------------------------------GATCCA------------------GTGATTTGT---GGTGTTATAGCAACACTAGCTTGGTTGTACATTATCTATGAAATA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGAAATGCTGCAGCC---CAA---AGC---GCA---TTT---GGA---ACAATT---AGATTAATTGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCAATTGGATATTGGCTAGCTACTGTC---------------------------------------CAGGAGCTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------YLYKELYMKLLLTMVGALALPVFA---ADLDVNDMTGISFWLVTAAMLASTVFFLVERDRVHG-KWKTSLSVAALVTGIAFWHYLYMRGVWV----------ET-------QTSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVGS-GL------------FWK-LLGASLVMLVGGFMGE---T------G--F----------------------------------DP------VIC-GVIATLAWLYIIYEI-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYPIGYWLATV-------------QEL-------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_1112731126081 [IV-Gamma5-SAR86a] JCVI_ORF_1112731126081 jcvi|1112731126081| 1112731126081 JCVI ORF 1112731126081 1112731126081 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 09-sept-05 Coastal_sample/2m_depth/S_35.5_psu/GS117a/St._Anne_Island/Seychelles/Indian_Ocean Indian Ocean marine -4.613611 55.50861 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TTGTATTATAAAGGCTTGTATATTACGGGGGGGAGTAATTTTACTCCTACTTACTTATATAAGGAGTTATATATGAAACTTTTATTAACAATGGTTGGTGCTTTAGCACTGCCTGTTTTTGCAGCCGATCTTGATGTAAATGACATGACTGGCATATCATTCTGGCTGGTAACAGCTGCAATGTTAGCGTCGACTGTTTTCTTCTTAGTAGAAAGAGACAGAGTTCATGGTAAATGGAAAACATCATTATCAGTTGCTGCCTTAGTTACTGGTATTGCTTTCTGGCATTACCTATATATGAGAGGCGTTTGGGTTGAAACACAAACATCACCTACTGTATATAGATATATTGACTGGTTAATAACTGTACCACTTCAAATTATTGAGTTCTACTTGATACTTAAAGTGTGTACAAATGTTGGCTCAGGTCTATTCTGGAAACTACTTGGTGCATCATTAGTGATGTTAGTAGGTGGTTTCATGGGTGAAACTGGATTTGATCCAGTGATTTGTGGTGTTATAGCAACACTAGCTTGGTTGTACATTATCTATGAAATATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGAAATGCTGCAGCCCAAAGCGCATTTGGAACAATTAGATTAATTGTTACAGTTGGTTGGGCTATTTATCCAATTGGATATTGGCTAGCTACT LYYKGLYITGGSNFTPTYLYKELYMKLLLTMVGALALPVFAADLDVNDMTGISFWLVTAAMLASTVFFLVERDRVHGKWKTSLSVAALVTGIAFWHYLYMRGVWVETQTSPTVYRYIDWLITVPLQIIEFYLILKVCTNVGSGLFWKLLGASLVMLVGGFMGETGFDPVICGVIATLAWLYIIYEIFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYPIGYWLAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTATTATAAAGGCTTGTATATTACGGGGGGGAGTAATTTTACTCCTACTTACTTATATAAGGAGTTATATATGAAACTTTTATTAACAATGGTTGGTGCTTTAGCACTGCCTGTTTTTGCA---------GCCGATCTTGATGTAAATGACATGACTGGCATATCATTCTGGCTGGTAACAGCTGCAATGTTAGCGTCGACTGTTTTCTTCTTAGTAGAAAGAGACAGAGTTCATGGT---AAATGGAAAACATCATTATCAGTTGCTGCCTTAGTTACTGGTATTGCTTTCTGGCATTACCTATATATGAGAGGCGTTTGGGTT------------------------------GAAACA---------------------CAAACATCACCTACTGTATATAGATATATTGACTGG------------------------TTAATAACTGTACCACTTCAAATTATTGAGTTCTACTTGATACTTAAAGTG---------TGT---ACAAATGTTGGCTCA---GGTCTA------------------------------------TTCTGGAAA---CTACTTGGTGCATCATTAGTGATGTTAGTAGGTGGTTTCATGGGTGAA---------ACT------------------GGA------TTT------------------------------------------------------------------------------------------------------GATCCA------------------GTGATTTGT---GGTGTTATAGCAACACTAGCTTGGTTGTACATTATCTATGAAATA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGAAATGCTGCAGCC---CAA---AGC---GCA---TTT---GGA---ACAATT---AGATTAATTGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCAATTGGATATTGGCTAGCTACT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------LYYKGLYITGGSNFTPTYLYKELYMKLLLTMVGALALPVFA---ADLDVNDMTGISFWLVTAAMLASTVFFLVERDRVHG-KWKTSLSVAALVTGIAFWHYLYMRGVWV----------ET-------QTSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVGS-GL------------FWK-LLGASLVMLVGGFMGE---T------G--F----------------------------------DP------VIC-GVIATLAWLYIIYEI-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYPIGYWLAT------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_1105098561392 [IV-Gamma5-SAR86a] JCVI_ORF_1105098561392 jcvi|1105098561392| 1105098561392 JCVI ORF 1105098561392 1105098561392 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 21-janv-04 Open_Ocean/2m_depth/S_32.6_psu/GS023/30_miles_from_Cocos_Island/Eastern_Tropical_Pacific Pacific Ocean marine 5.64 -86.56528 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TGGCTTGCAGTAGCGTCGACTGTTTTCTTCTTAGTAGAAAGAGACAGAGTTCATGGTAAATGGAAAACATCATTATCAGTTGCTGCCTTAGTTACTGGTATTGCTTTCTGGCATTACCTATATATGAGAGGCGTTTGGGTTGAAACACAAACATCACCTACTGTATATAGATATATTGATTGGTTAATAACTGTACCACTTCAAATTATTGAGTTCTACTTGATACTTAAAGTGTGTACAAATGTTGGCTCAGGTCTATTCTGGAAACTACTTGGTGCATCATTAGTGATGTTAGTAGGTGGTTTCATGGGTGAAACTGGATTTGATCCAGTGATTTGTGGTGTTATAGCAACACTAGCTTGGTTGTACATTATCTATGAAATATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGAAATGCTGCAGCCCAAAGCGCATTTGGAACAATTAGATTAATTGTTACAGTTGGTTGGGCTATTTATCCAATTGGATATTGGCTAGCTACTGGTCCAGGAGCTGATATGGCTAATGCTAACTTGATCTATAACCTTGCTGATTTTCTAAACAAAATCGCATTTGGTTTAGCTATTTATGTAGCAGCGGTCAGCGACTCAGAA WLAVASTVFFLVERDRVHGKWKTSLSVAALVTGIAFWHYLYMRGVWVETQTSPTVYRYIDWLITVPLQIIEFYLILKVCTNVGSGLFWKLLGASLVMLVGGFMGETGFDPVICGVIATLAWLYIIYEIFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYPIGYWLATGPGADMANANLIYNLADFLNKIAFGLAIYVAAVSDSE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCTT------------GCAGTAGCGTCGACTGTTTTCTTCTTAGTAGAAAGAGACAGAGTTCATGGT---AAATGGAAAACATCATTATCAGTTGCTGCCTTAGTTACTGGTATTGCTTTCTGGCATTACCTATATATGAGAGGCGTTTGGGTT------------------------------GAAACA---------------------CAAACATCACCTACTGTATATAGATATATTGATTGG------------------------TTAATAACTGTACCACTTCAAATTATTGAGTTCTACTTGATACTTAAAGTG---------TGT---ACAAATGTTGGCTCA---GGTCTA------------------------------------TTCTGGAAA---CTACTTGGTGCATCATTAGTGATGTTAGTAGGTGGTTTCATGGGTGAA---------ACT------------------GGA------TTT------------------------------------------------------------------------------------------------------GATCCA------------------GTGATTTGT---GGTGTTATAGCAACACTAGCTTGGTTGTACATTATCTATGAAATA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGAAATGCTGCAGCC---CAA---AGC---GCA---TTT---GGA---ACAATT---AGATTAATTGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCAATTGGATATTGGCTAGCTACTGGT---------------------------------------CCAGGAGCT---GATATGGCTAATGCTAACTTGATCTATAACCTTGCTGATTTTCTAAACAAAATCGCATTTGGTTTAGCTATTTATGTAGCAGCGGTCAGCGAC---TCAGAA--------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------WL----AVASTVFFLVERDRVHG-KWKTSLSVAALVTGIAFWHYLYMRGVWV----------ET-------QTSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVGS-GL------------FWK-LLGASLVMLVGGFMGE---T------G--F----------------------------------DP------VIC-GVIATLAWLYIIYEI-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYPIGYWLATG-------------PGA-DMANANLIYNLADFLNKIAFGLAIYVAAVSD-SE--------------------------------------- [IV-Gamma5-SAR86a]_1112709411517 [IV-Gamma5-SAR86a] JCVI_ORF_1112709411517_GS120_Open_Ocean_3m jcvi|1112709411517| 1112709411517 JCVI ORF 1112709411517 1112709411517 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 27-sept-05 Open_Ocean/3m_depth/S_35.6_psu/GS120/Madagascar_Waters/Indian_Ocean Indian Ocean marine -26.035 50.123055 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TTGTATGATAAAGGCTTGTATATTACGGGGGGGAGTAATTTTACTCCTACTTACTTATATAAGGAGTTATATATGAAACTTTTATTAACAATGGTTGGTGCTTTAGCACTGCCTGTTTTTGCAGCCGATCTTGATGTAAATGACATGACCGGCATATCATTCTGGCTGGTAACAGCTGCAATGTTAGCGTCGACTGTTTTCTTCTTAGTAGAAAGAGACAGAGTTCATGGTAAATGGAAAACATCATTATCAGTTGCTGCCTTAGTTACTGGTATTGCTTTCTGGCATTACCTATACATGAGAGGCGTTTGGGTTGAAACACAAACATCACCTACTGTATATAGATATATTGACTGGTTAATAACTGTGCCACTTCAAATTATTGAGTTCTACTTGATACTTAAAGTGTGTACAAATGTTGGCTCAGGTCTATTCTGGAAACTACTTGGTGCATCATTAGTGATGTTAGTAGGTGGTTTCATGGGTGAAACTGGATTTGATCCAGTGATTTGTGGTGTTATAGCAACACTAGCTTGGTTGTACATTATCTATGAAATATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGAAATGCTGCAGCCCAAAGTGCATTTGGAACAATTAGATTAATTGTTACAGTTGGTTGGGCTATTTATCCAATTGGATATTGGGTAGCTACTGGTCCAGGAGCTGATATGGCTAATGCTAACTTGATCTATAACCTTGCTGATTTCCTAAACAAAATCGCATTTGGTTTAGCTATTTATGTAGCAGCGGTCAGCGACTCAGAA LYDKGLYITGGSNFTPTYLYKELYMKLLLTMVGALALPVFAADLDVNDMTGISFWLVTAAMLASTVFFLVERDRVHGKWKTSLSVAALVTGIAFWHYLYMRGVWVETQTSPTVYRYIDWLITVPLQIIEFYLILKVCTNVGSGLFWKLLGASLVMLVGGFMGETGFDPVICGVIATLAWLYIIYEIFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYPIGYWVATGPGADMANANLIYNLADFLNKIAFGLAIYVAAVSDSE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTATGATAAAGGCTTGTATATTACGGGGGGGAGTAATTTTACTCCTACTTACTTATATAAGGAGTTATATATGAAACTTTTATTAACAATGGTTGGTGCTTTAGCACTGCCTGTTTTTGCA---------GCCGATCTTGATGTAAATGACATGACCGGCATATCATTCTGGCTGGTAACAGCTGCAATGTTAGCGTCGACTGTTTTCTTCTTAGTAGAAAGAGACAGAGTTCATGGT---AAATGGAAAACATCATTATCAGTTGCTGCCTTAGTTACTGGTATTGCTTTCTGGCATTACCTATACATGAGAGGCGTTTGGGTT------------------------------GAAACA---------------------CAAACATCACCTACTGTATATAGATATATTGACTGG------------------------TTAATAACTGTGCCACTTCAAATTATTGAGTTCTACTTGATACTTAAAGTG---------TGT---ACAAATGTTGGCTCA---GGTCTA------------------------------------TTCTGGAAA---CTACTTGGTGCATCATTAGTGATGTTAGTAGGTGGTTTCATGGGTGAA---------ACT------------------GGA------TTT------------------------------------------------------------------------------------------------------GATCCA------------------GTGATTTGT---GGTGTTATAGCAACACTAGCTTGGTTGTACATTATCTATGAAATA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGAAATGCTGCAGCC---CAA---AGT---GCA---TTT---GGA---ACAATT---AGATTAATTGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCAATTGGATATTGGGTAGCTACTGGT---------------------------------------CCAGGAGCT---GATATGGCTAATGCTAACTTGATCTATAACCTTGCTGATTTCCTAAACAAAATCGCATTTGGTTTAGCTATTTATGTAGCAGCGGTCAGCGAC---TCAGAA--------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------LYDKGLYITGGSNFTPTYLYKELYMKLLLTMVGALALPVFA---ADLDVNDMTGISFWLVTAAMLASTVFFLVERDRVHG-KWKTSLSVAALVTGIAFWHYLYMRGVWV----------ET-------QTSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVGS-GL------------FWK-LLGASLVMLVGGFMGE---T------G--F----------------------------------DP------VIC-GVIATLAWLYIIYEI-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYPIGYWVATG-------------PGA-DMANANLIYNLADFLNKIAFGLAIYVAAVSD-SE--------------------------------------- [IV-Gamma5-SAR86a]_EU915742 [IV-Gamma5-SAR86a] PF75050_env_samples_EU915742 gi|229358366|gb|EU915742| Uncultured microorganism clone PF75050 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF75050 putative proteorhodopsin gene, partial cds EU915742 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na GTATTAGCGGCTACTGTATTCTTCTTAGTAGAAAGAGACAGAGTTCATGGTAAATGGAAAACGTCATTATCAGTTGCTGCCTTAGTTACTGGTATTGCTTTCTGGCATTACCTATATACGAGAGGCGTTTGGGTTGAAACACAAACATCACCTACTGTATATAGATATATTGACTGGTTAATAACTGTGCCACTTCAAATTATTGAGTTCTACTTGATACTTAAAGTGTGTACAAATGTTGGCTCAGGTCTATTCTGGAAACTACTTGGTGCATCATTAGTGATGTTAGTAGGTGGTTTCATGGGTGAAACTGGATTTGATCCAGTGATTTGTGGTGTTATAGCAACACTAGCTTGGTTGTACATTATCTATGAAATATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGAAATGCTGCAGCCCAAAGCGCATTTGGGACAATTAGATTGATTGTTACAGTTGGTTGGGCGATCTAC VLAATVFFLVERDRVHGKWKTSLSVAALVTGIAFWHYLYTRGVWVETQTSPTVYRYIDWLITVPLQIIEFYLILKVCTNVGSGLFWKLLGASLVMLVGGFMGETGFDPVICGVIATLAWLYIIYEIFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGGCTACTGTATTCTTCTTAGTAGAAAGAGACAGAGTTCATGGT---AAATGGAAAACGTCATTATCAGTTGCTGCCTTAGTTACTGGTATTGCTTTCTGGCATTACCTATATACGAGAGGCGTTTGGGTT------------------------------GAAACA---------------------CAAACATCACCTACTGTATATAGATATATTGACTGG------------------------TTAATAACTGTGCCACTTCAAATTATTGAGTTCTACTTGATACTTAAAGTG---------TGT---ACAAATGTTGGCTCA---GGTCTA------------------------------------TTCTGGAAA---CTACTTGGTGCATCATTAGTGATGTTAGTAGGTGGTTTCATGGGTGAA---------ACT------------------GGA------TTT------------------------------------------------------------------------------------------------------GATCCA------------------GTGATTTGT---GGTGTTATAGCAACACTAGCTTGGTTGTACATTATCTATGAAATA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGAAATGCTGCAGCC---CAA---AGC---GCA---TTT---GGG---ACAATT---AGATTGATTGTTACAGTT---------------------------------------------------------------GGTTGG---------GCGATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------VLAATVFFLVERDRVHG-KWKTSLSVAALVTGIAFWHYLYTRGVWV----------ET-------QTSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVGS-GL------------FWK-LLGASLVMLVGGFMGE---T------G--F----------------------------------DP------VIC-GVIATLAWLYIIYEI-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_1105088980328 [IV-Gamma5-SAR86a] JCVI_ORF_1105088980328_GS030_Warm_Seep_19m jcvi|1105088980328| 1105088980328 JCVI ORF 1105088980328 1105088980328 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 09-FEB-2004 Warm_Seep/19m_depth/S_n.a/GS030/Warm_seep/Roca_Redonda/Galapagos_Islands Red Sea marine 0.27222222 -91.63333 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf GAAGGGCTGGCAGGTGCATTAGCACTGCCTGTTTTTGCAGCTGATCTAGATACAGCTGACATGACTGGCATATCATTCTGGCTGGTAACAGCTGCGATGTTAGCTGCCACTGTTTTCTTCCTAGTAGAAAGAGACAGAGTTCATGGTAAATGGAAAACATCATTATCAGTTGCTGCTTTAGTTACTGGTATTGCTTTCTGGCATTATCTATATATGAGAGGAGTTTGGGTTGAAACACAAACATCACCTACTGTATATAGATATATTGACTGGTTAATAACTGTGCCACTTCAAATTATTGAGTTCTACTTAATTCTTAAAGTGTGTACAAATGTTGGCTCAGGTCTATTCTGGAGACTACTTGGTGCATCATTAGTGATGTTAGTAGGTGGTTTCATGGGTGAAACTGGATTCAATCCTATGGTGTGTGGTGTTATTGCAACACTAGCTTGGTTGTACATTATCTATGAAGTATTTTCTGGCGAAGCTGGAAAACTCAACGCTTCAAGTGGAAATGCTGCAGCTCAAAGCGCATTTGGAACAATTAGATTAATTGTTACAGTTGGTTGGGCTATTTATCCAATTGGATATTGGCTAGCTACTGGTCCAGGAGCTGATATGGCTAATGCTAACTTAATCTATAACCTTGCTGATTTTATTAACAAAATCGCATTTGGTTTAGCTATTTATGTAGCAGCAGTCAGCGACTCAGAA EGLAGALALPVFAADLDTADMTGISFWLVTAAMLAATVFFLVERDRVHGKWKTSLSVAALVTGIAFWHYLYMRGVWVETQTSPTVYRYIDWLITVPLQIIEFYLILKVCTNVGSGLFWRLLGASLVMLVGGFMGETGFNPMVCGVIATLAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYPIGYWLATGPGADMANANLIYNLADFINKIAFGLAIYVAAVSDSE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAGGGCTGGCAGGTGCATTAGCACTGCCTGTTTTTGCA---------GCTGATCTAGATACAGCTGACATGACTGGCATATCATTCTGGCTGGTAACAGCTGCGATGTTAGCTGCCACTGTTTTCTTCCTAGTAGAAAGAGACAGAGTTCATGGT---AAATGGAAAACATCATTATCAGTTGCTGCTTTAGTTACTGGTATTGCTTTCTGGCATTATCTATATATGAGAGGAGTTTGGGTT------------------------------GAAACA---------------------CAAACATCACCTACTGTATATAGATATATTGACTGG------------------------TTAATAACTGTGCCACTTCAAATTATTGAGTTCTACTTAATTCTTAAAGTG---------TGT---ACAAATGTTGGCTCA---GGTCTA------------------------------------TTCTGGAGA---CTACTTGGTGCATCATTAGTGATGTTAGTAGGTGGTTTCATGGGTGAA---------ACT------------------GGA------TTC------------------------------------------------------------------------------------------------------AATCCT------------------ATGGTGTGT---GGTGTTATTGCAACACTAGCTTGGTTGTACATTATCTATGAAGTA---------------TTT------TCT---GGCGAAGCTGGAAAACTCAACGCTTCA------AGT---GGAAATGCTGCAGCT---CAA---AGC---GCA---TTT---GGA---ACAATT---AGATTAATTGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCAATTGGATATTGGCTAGCTACTGGT---------------------------------------CCAGGAGCT---GATATGGCTAATGCTAACTTAATCTATAACCTTGCTGATTTTATTAACAAAATCGCATTTGGTTTAGCTATTTATGTAGCAGCAGTCAGCGAC---TCAGAA--------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------EGLAGALALPVFA---ADLDTADMTGISFWLVTAAMLAATVFFLVERDRVHG-KWKTSLSVAALVTGIAFWHYLYMRGVWV----------ET-------QTSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVGS-GL------------FWR-LLGASLVMLVGGFMGE---T------G--F----------------------------------NP------MVC-GVIATLAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYPIGYWLATG-------------PGA-DMANANLIYNLADFINKIAFGLAIYVAAVSD-SE--------------------------------------- [IV-Gamma5-SAR86a]_DQ203803 [IV-Gamma5-SAR86a] SS114a40B10_env_samples_DQ203803 gi|77548054|gb|DQ203803| Uncultured bacterium clone SS114a40B10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40B10 predicted proteorhodopsin gene, partial cds DQ203803 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTAATTACTGTGCCACTTCAAATTATCGAATTCTACTTAATTCTAAAAGTATGTACTAATGTTAAATCTAGTCTATTCTGGAAATTACTAGTTGCATCTTTAGTAATGCTTGGATTTGGTTTTGCTGGAGAAACATATGTTTTACCAGAAGGTGTGACTGAATCAAGTATGCCAATGGTTTATGGTGTTATAGCAACACTAGCCTGGTTGTACATCATCTATGAAGTATTTGCTGGTGAAGCTGGCAAACTTAATGCTTCAAGTGGAAATGCTGCAGCTCAAAGCGCTTTTGGAACGATTAGATTAATTGTTACATTTGGTTGGGCCATATACCCA RYIDWLITVPLQIIEFYLILKVCTNVKSSLFWKLLVASLVMLGFGFAGETYVLPEGVTESSMPMVYGVIATLAWLYIIYEVFAGEAGKLNASSGNAAAQSAFGTIRLIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACTGTGCCACTTCAAATTATCGAATTCTACTTAATTCTAAAAGTA---------TGT---ACTAATGTTAAATCT---AGTCTA------------------------------------TTCTGGAAA---TTACTAGTTGCATCTTTAGTAATGCTTGGATTTGGTTTTGCTGGAGAA---------ACA------------------TAT------GTT---------------------------------TTACCA---GAAGGTGTG---ACTGAA---------TCA---------------------------AGTATGCCA------------------ATGGTTTAT---GGTGTTATAGCAACACTAGCCTGGTTGTACATCATCTATGAAGTA---------------TTT------GCT---GGTGAAGCTGGCAAACTTAATGCTTCA------AGT---GGAAATGCTGCAGCT---CAA---AGC---GCT---TTT---GGA---ACGATT---AGATTAATTGTTACATTT---------------------------------------------------------------GGTTGG---------GCCATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILKV---C-TNVKS-SL------------FWK-LLVASLVMLGFGFAGE---T------Y--V-----------LP-EGV-TE---S---------SMP------MVY-GVIATLAWLYIIYEV-----F--A-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ203703 [IV-Gamma5-SAR86a] medHO155E2_env_samples_DQ203703 gi|77547854|gb|DQ203703| Uncultured bacterium clone medHO155E2 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155E2 predicted proteorhodopsin gene, partial cds DQ203703 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGACTGGCTGATTACAGTACCGCTTCAAATTATTGAGTTCTACTTAATTCTTAAAGTGTGTACTAATGTTAGCTCAGGTCTATTCTGGAAATTGCTAGTTGCATCTTTAGTTATGCTTGGATTTGGTTTTGCTGGAGAAACACATGTTATTCCAGAAGGTGAGACATCATCTACGCCAATGATATATGGTGTTATAGCAACACTAGCGTGGTTATACATTATCTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCTGCAGCTCAAAGTGCATTTGGAACAATTAGATTAATTGTTACAGTTGGTTGGGCCATATATCCA RYIDWLITVPLQIIEFYLILKVCTNVSSGLFWKLLVASLVMLGFGFAGETHVIPEGETSSTPMIYGVIATLAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGACTGG------------------------CTGATTACAGTACCGCTTCAAATTATTGAGTTCTACTTAATTCTTAAAGTG---------TGT---ACTAATGTTAGCTCA---GGTCTA------------------------------------TTCTGGAAA---TTGCTAGTTGCATCTTTAGTTATGCTTGGATTTGGTTTTGCTGGAGAA---------ACA------------------CAT------GTT---------------------------------ATTCCA---GAAGGT------GAGACA---------TCA---------------------------TCTACGCCA------------------ATGATATAT---GGTGTTATAGCAACACTAGCGTGGTTATACATTATCTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCTGCAGCT---CAA---AGT---GCA---TTT---GGA---ACAATT---AGATTAATTGTTACAGTT---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWK-LLVASLVMLGFGFAGE---T------H--V-----------IP-EG--ET---S---------STP------MIY-GVIATLAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_1105140749204 [IV-Gamma5-SAR86a] JCVI_ORF_1105140749204 jcvi|1105140749204| 1105140749204 JCVI ORF 1105140749204 1105140749204 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.22_0.8 other #na 25-FEB-2003 Open_Ocean/5m_depth/S_36.7_psu/GS000c/Sargasso_Stations_3/Sargasso_Sea Sargasso Sea marine 32.174835 -64.01017 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf GCGTTGAAGCTTTGTACTGCTGCTATGCTCGCAGCAACTGTATTCTTTCTTGTTGAAAGAGACAGAGTACATGGAAAGTGGAAAACATCACTATCCGTAGCTGCCTTAGTTACTGGTATTGCTTTCTGGCATTACTTGTACATGAGAGGTGTATGGGTTAACACTGGTGACTCACCAACAGTATTTAGATATATTGATTGGTTAATCACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTGTGTACGAATGTTAGCTCAGGATTATTCTGGAAATTACTTACAGCATCATTAGTTATGCTTGTATTTGGTTTCATGGGAGAAACATATGTTGTCCCAGAAGAAGGGTCATCTATGCCAATGATATATGGTGTTATTGCAACACTGGCTTGGTTATATATTATCTATGAAGTATTTTCTGGTGAAGCAGGAAAACTTAATGCTTCTAGTGGTAATGCAGCAGCTCAAAGCGCATTTGGAACAATTAGATTAATTGTTACAGTTGGTTGGGCTATTTATCCCATTGGATATTGGTTAGCATTACAAGGTACACCAGGCGGATACGCAAATGCTAACTTAATTTATAACCTTGCTGATTTTGTTAACAAAATAGCATTTGGTTTAGCTATTTATGTAGCTGCTGTTAGCGATTCAGAA ALKLCTAAMLAATVFFLVERDRVHGKWKTSLSVAALVTGIAFWHYLYMRGVWVNTGDSPTVFRYIDWLITVPLQIIEFYLILKVCTNVSSGLFWKLLTASLVMLVFGFMGETYVVPEEGSSMPMIYGVIATLAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYPIGYWLALQGTPGGYANANLIYNLADFVNKIAFGLAIYVAAVSDSE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGTTGAAGCTTTGTACTGCTGCTATGCTCGCAGCAACTGTATTCTTTCTTGTTGAAAGAGACAGAGTACATGGA---AAGTGGAAAACATCACTATCCGTAGCTGCCTTAGTTACTGGTATTGCTTTCTGGCATTACTTGTACATGAGAGGTGTATGGGTT------------------------------AACACT---------------------GGTGACTCACCAACAGTATTTAGATATATTGATTGG------------------------TTAATCACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTG---------TGT---ACGAATGTTAGCTCA---GGATTA------------------------------------TTCTGGAAA---TTACTTACAGCATCATTAGTTATGCTTGTATTTGGTTTCATGGGAGAA---------ACA------------------TAT------GTT---------------------------------GTCCCA---GAA---------GAAGGG---------TCA---------------------------TCTATGCCA------------------ATGATATAT---GGTGTTATTGCAACACTGGCTTGGTTATATATTATCTATGAAGTA---------------TTT------TCT---GGTGAAGCAGGAAAACTTAATGCTTCT------AGT---GGTAATGCAGCAGCT---CAA---AGC---GCA---TTT---GGA---ACAATT---AGATTAATTGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCCATTGGATATTGGTTAGCATTACAA---------------------------------------GGTACACCAGGCGGATACGCAAATGCTAACTTAATTTATAACCTTGCTGATTTTGTTAACAAAATAGCATTTGGTTTAGCTATTTATGTAGCTGCTGTTAGCGATTCAGAA------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------ALKLCTAAMLAATVFFLVERDRVHG-KWKTSLSVAALVTGIAFWHYLYMRGVWV----------NT-------GDSPTVFRYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWK-LLTASLVMLVFGFMGE---T------Y--V-----------VP-E---EG---S---------SMP------MIY-GVIATLAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYPIGYWLALQ-------------GTPGGYANANLIYNLADFVNKIAFGLAIYVAAVSDSE---------------------------------------- [IV-Gamma5-SAR86a]_1105159467596 [IV-Gamma5-SAR86a] JCVI_ORF_1105159467596 jcvi|1105159467596| 1105159467596 JCVI ORF 1105159467596 1105159467596 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 08-janv-04 Coastal/2m_depth/S_36_psu/GS015/Off_Key_West/FL/Caribbean_Sea Caribbean Sea marine 24.488333 -83.07 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGACAGGAATGTCATTCTGGATAGTAACTGCTGCTATGCTTGCTGCTACAGTATTCTTCTTTGTTGAAAGAGATAGAGTACACGGCAAATGGAAAACTTCATTATCAGTTGCTGGTCTAGTTACTGGTGTGGCGTTTTGGCATTATCTATATATGAGAGGTGTTTGGGCCGATACAGGTACATCTCCTACCGTATATAGATATATCGACTGGTTAATTACAGTGCCACTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTTTGCACTAACGTAAGCTCTGGTCTTTTCTGGAAACTACTTGGAGCATCTTTAGTAATGCTTATTGCTGGTTTCATGGGAGAAACTGGTTCTGCTCCAGCTAATGCAGCTGGTATCGTTGGAGTAATTGCTTGGTTATATATCATTTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCTGCTGCTCAAAGTGCCTTTGGAACAATTAGATTAATTGTTACTATAGGTTGGGCTATTTATCCAATAGGATATTGGGTAGGTGTCGGAGCAAATGCTGACATGGCAAACGCTAACTTAATATACAACTATGCTGATTTTATTAACAAAATCGCATTTGGTTTAGCTATTTATGTAGCTGCTGTTAGCGACTCAGAA MTGMSFWIVTAAMLAATVFFFVERDRVHGKWKTSLSVAGLVTGVAFWHYLYMRGVWADTGTSPTVYRYIDWLITVPLQIIEFYLILKVCTNVSSGLFWKLLGASLVMLIAGFMGETGSAPANAAGIVGVIAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTIGWAIYPIGYWVGVGANADMANANLIYNYADFINKIAFGLAIYVAAVSDSE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGACAGGAATGTCATTCTGGATAGTAACTGCTGCTATGCTTGCTGCTACAGTATTCTTCTTTGTTGAAAGAGATAGAGTACACGGC---AAATGGAAAACTTCATTATCAGTTGCTGGTCTAGTTACTGGTGTGGCGTTTTGGCATTATCTATATATGAGAGGTGTTTGGGCC------------------------------GATACA---------------------GGTACATCTCCTACCGTATATAGATATATCGACTGG------------------------TTAATTACAGTGCCACTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTT---------TGC---ACTAACGTAAGCTCT---GGTCTT------------------------------------TTCTGGAAA---CTACTTGGAGCATCTTTAGTAATGCTTATTGCTGGTTTCATGGGAGAA---------ACT------------------GGT------TCT---------------------------------GCT------------------------------------------------------------------CCAGCT------------------AATGCAGCT---GGTATCGTTGGAGTAATTGCTTGGTTATATATCATTTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCTGCTGCT---CAA---AGT---GCC---TTT---GGA---ACAATT---AGATTAATTGTTACTATA---------------------------------------------------------------GGTTGG---------GCTATTTATCCAATAGGATATTGGGTAGGTGTCGGA---------------------------------------GCAAATGCT---GACATGGCAAACGCTAACTTAATATACAACTATGCTGATTTTATTAACAAAATCGCATTTGGTTTAGCTATTTATGTAGCTGCTGTTAGCGAC---TCAGAA--------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------MTGMSFWIVTAAMLAATVFFFVERDRVHG-KWKTSLSVAGLVTGVAFWHYLYMRGVWA----------DT-------GTSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWK-LLGASLVMLIAGFMGE---T------G--S-----------A----------------------PA------NAA-GIVGVIAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTI---------------------GW---AIYPIGYWVGVG-------------ANA-DMANANLIYNYADFINKIAFGLAIYVAAVSD-SE--------------------------------------- [IV-Gamma5-SAR86a]_1105159597866 [IV-Gamma5-SAR86a] JCVI_ORF_1105159597866_GS015_Coastal_2m jcvi|1105159597866| 1105159597866 JCVI ORF 1105159597866 1105159597866 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 08-janv-04 Coastal/2m_depth/S_36_psu/GS015/Off_Key_West/FL/Caribbean_Sea Caribbean Sea marine 24.488333 -83.07 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf GTGGTTGCGCTTCCTGCTTTTGCTTCAGATCTAAGCACAAGTGATATGACAGGAATGTCATTCTGGATAGTAACTGCTGCTATGCTTGCTGCTACAGTATTCTTCTTTGTTGAAAGAGATAGAGTACACGGCAAATGGAAAACTTCATTATCAGTTGCTGGTCTAGTTACTGGTGTGGCGTTTTGGCATTATCTATATATGAGAGGTGTTTGGGCCGATACAGGTACATCTCCTACCGTATATAGATATATCGACTGGTTAATTACAGTGCCACTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTTTGCACTAACGTAAGCTCTGGTCTTTTCTGGAAACTACTTGGAGCATCTTTAGTAATGCTTATTGCTGGTTTCATGGGAGAAACTGGTTCTGCTCCAGCTAATGCAGCTGGTATCGTTGGAGTAATTGCTTGGTTATATATCATTTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCTGCTGCTCAAAGTGCCTTTGGAACAATTAGATTAATTGTTACTATAGGTTGGGCTATTTATCCAATAGGATATTGGGTAGGTGTCGGAGCAAATGCTGACATGGCAAACGCTAACTTAATATACAACTATGCTGATTTTATTAACAAAATCGCATTTGGTTTAGCTATTTATGTAGCTGCTGTTAGCGACTCAGAA VVALPAFASDLSTSDMTGMSFWIVTAAMLAATVFFFVERDRVHGKWKTSLSVAGLVTGVAFWHYLYMRGVWADTGTSPTVYRYIDWLITVPLQIIEFYLILKVCTNVSSGLFWKLLGASLVMLIAGFMGETGSAPANAAGIVGVIAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTIGWAIYPIGYWVGVGANADMANANLIYNYADFINKIAFGLAIYVAAVSDSE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGGTTGCGCTTCCTGCTTTTGCT---------TCAGATCTAAGCACAAGTGATATGACAGGAATGTCATTCTGGATAGTAACTGCTGCTATGCTTGCTGCTACAGTATTCTTCTTTGTTGAAAGAGATAGAGTACACGGC---AAATGGAAAACTTCATTATCAGTTGCTGGTCTAGTTACTGGTGTGGCGTTTTGGCATTATCTATATATGAGAGGTGTTTGGGCC------------------------------GATACA---------------------GGTACATCTCCTACCGTATATAGATATATCGACTGG------------------------TTAATTACAGTGCCACTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTT---------TGC---ACTAACGTAAGCTCT---GGTCTT------------------------------------TTCTGGAAA---CTACTTGGAGCATCTTTAGTAATGCTTATTGCTGGTTTCATGGGAGAA---------ACT------------------GGT------TCT---------------------------------GCT------------------------------------------------------------------CCAGCT------------------AATGCAGCT---GGTATCGTTGGAGTAATTGCTTGGTTATATATCATTTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCTGCTGCT---CAA---AGT---GCC---TTT---GGA---ACAATT---AGATTAATTGTTACTATA---------------------------------------------------------------GGTTGG---------GCTATTTATCCAATAGGATATTGGGTAGGTGTCGGA---------------------------------------GCAAATGCT---GACATGGCAAACGCTAACTTAATATACAACTATGCTGATTTTATTAACAAAATCGCATTTGGTTTAGCTATTTATGTAGCTGCTGTTAGCGAC---TCAGAA--------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------VVALPAFA---SDLSTSDMTGMSFWIVTAAMLAATVFFFVERDRVHG-KWKTSLSVAGLVTGVAFWHYLYMRGVWA----------DT-------GTSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWK-LLGASLVMLIAGFMGE---T------G--S-----------A----------------------PA------NAA-GIVGVIAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTI---------------------GW---AIYPIGYWVGVG-------------ANA-DMANANLIYNYADFINKIAFGLAIYVAAVSD-SE--------------------------------------- [IV-Gamma5-SAR86a]_1105160253846 [IV-Gamma5-SAR86a] JCVI_ORF_1105160253846_GS023_Open_Ocean_2m jcvi|1105160253846| 1105160253846 JCVI ORF 1105160253846 1105160253846 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 21-janv-04 Open_Ocean/2m_depth/S_32.6_psu/GS023/30_miles_from_Cocos_Island/Eastern_Tropical_Pacific Pacific Ocean marine 5.64 -86.56528 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TTGCTCCACTACTTATATAAGGAGTTATATATGAAATTTTTATTAACACTTGCAGGCGTGGTTGCGCTTCCTGCTTTTGCTTCAGATCTAAGCACAAGTGATATGACAGGAATGTCATTCTGGATAGTAACTGCTGCTATGCTTGCTGCTACAGTATTCTTCTTTGTTGAAAGAGATAGAGTACACGGCAAATGGAAAACTTCATTATCAGTTGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTATCTATATATGAGAGGTGTTTGGGCCGATACAGGTACATCTCCTACCGTATACAGATATATCGACTGGTTAATTACAGTGCCGCTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTTTGCACTAACGTAAGCTCTGGTCTTTTCTGGAAACTACTTGGAGCATCTTTAGTAATGCTTATTGCTGGTTTCATGGGAGAAACTGGTTCTGCTCCAGCTAATGCAGCTGGTATCGTTGGAGTAATTGCTTGGTTATATATCATTTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCTGCTGCTCAAAGTGCCTTTGGAACAATTAGATTAATTGTTACTATAGGTTGGGCTATTTATCCAATAGGATATTGGGTAGGTGTCGGAGCAAATGCTGACATGGCAAACGCTAACTTAATATACAACTATGCTGATTTTATTAACAAAATCGCATTTGGTTTAGCTATTTATGTAGCTGCTGTTAGCGACTCAGAA LLHYLYKELYMKFLLTLAGVVALPAFASDLSTSDMTGMSFWIVTAAMLAATVFFFVERDRVHGKWKTSLSVAGLVTGVAFWHYLYMRGVWADTGTSPTVYRYIDWLITVPLQIIEFYLILKVCTNVSSGLFWKLLGASLVMLIAGFMGETGSAPANAAGIVGVIAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTIGWAIYPIGYWVGVGANADMANANLIYNYADFINKIAFGLAIYVAAVSDSE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTCCACTACTTATATAAGGAGTTATATATGAAATTTTTATTAACACTTGCAGGCGTGGTTGCGCTTCCTGCTTTTGCT---------TCAGATCTAAGCACAAGTGATATGACAGGAATGTCATTCTGGATAGTAACTGCTGCTATGCTTGCTGCTACAGTATTCTTCTTTGTTGAAAGAGATAGAGTACACGGC---AAATGGAAAACTTCATTATCAGTTGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTATCTATATATGAGAGGTGTTTGGGCC------------------------------GATACA---------------------GGTACATCTCCTACCGTATACAGATATATCGACTGG------------------------TTAATTACAGTGCCGCTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTT---------TGC---ACTAACGTAAGCTCT---GGTCTT------------------------------------TTCTGGAAA---CTACTTGGAGCATCTTTAGTAATGCTTATTGCTGGTTTCATGGGAGAA---------ACT------------------GGT------TCT---------------------------------GCT------------------------------------------------------------------CCAGCT------------------AATGCAGCT---GGTATCGTTGGAGTAATTGCTTGGTTATATATCATTTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCTGCTGCT---CAA---AGT---GCC---TTT---GGA---ACAATT---AGATTAATTGTTACTATA---------------------------------------------------------------GGTTGG---------GCTATTTATCCAATAGGATATTGGGTAGGTGTCGGA---------------------------------------GCAAATGCT---GACATGGCAAACGCTAACTTAATATACAACTATGCTGATTTTATTAACAAAATCGCATTTGGTTTAGCTATTTATGTAGCTGCTGTTAGCGAC---TCAGAA--------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------LLHYLYKELYMKFLLTLAGVVALPAFA---SDLSTSDMTGMSFWIVTAAMLAATVFFFVERDRVHG-KWKTSLSVAGLVTGVAFWHYLYMRGVWA----------DT-------GTSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWK-LLGASLVMLIAGFMGE---T------G--S-----------A----------------------PA------NAA-GIVGVIAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTI---------------------GW---AIYPIGYWVGVG-------------ANA-DMANANLIYNYADFINKIAFGLAIYVAAVSD-SE--------------------------------------- [IV-Gamma5-SAR86a]_AY619685 [IV-Gamma5-SAR86a] Uncultured_Gammaproteobacterium_eBACHOT4E07_complete_cds_AY619685 gi|47779335|gb|AY619685| Uncultured gamma proteobacterium eBACHOT4E07 clone eBACHOT4E07, complete sequence Uncultured gamma proteobacterium eBACHOT4E07 clone eBACHOT4E07, complete sequence AY619685 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/Proteobacteria/Gammaproteobacteria/SAR86 cluster/environmental samples] taxon:279908 genomic_DNA other 12-oct-03 #na seawater Red Sea marine 22.75 -158 Different SAR86 subgroups harbour divergent proteorhodopsins Sabehi,G., Beja,O., Suzuki,M.T., Preston,C.M. and DeLong,E.F. Environ. Microbiol. 6 (9), 903910 (2004) 15305915 surface bacterioplankton from Hawaii Ocean TimeSeries (HOT) Station ALOHA ATGAAATTTTTATTAACACTTGCAGGCGTGGTTGCGCTTCCTGCTTTTGCTTCAGATCTAAGCACAAGCGATATGACAGGAATGTCATTCTGGATAGTAACTGCTGCTATGCTTGCTGCTACAGTATTCTTCTTTGTTGAAAGAGATAGAGTACACGGCAAATGGAAAACTTCATTATCAGTTGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTATCTATATATGAGAGGTGTTTGGGCCGATACAGGTACATCTCCTACCGTATACAGATATATCGACTGGTTAATTACAGTGCCGCTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTTTGCACTAACGTAAGCTCTGGTCTTTTCTGGAAACTACTTGGAGCATCTTTAGTAATGCTTATTGCTGGTTTCATGGGAGAAACTGGTTCTGCTCCAGCTAATGCAGCTGGTATCGTTGGAGTAATTGCTTGGTTATATATCATTTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCTGCTGCTCAAAGTGCCTTTGGAACAATTAGATTAATTGTTACTATAGGTTGGGCTATTTATCCAATAGGATATTGGGTAGGTGTCGGAGCAAATGCTGACATGGCAAACGCTAACTTAATATACAACTATGCTGATTTTATTAACAAAATCGCATTTGGTTTAGCTATTTATGTAGCTGCTGTTAGCGACTCAGAA MKFLLTLAGVVALPAFASDLSTSDMTGMSFWIVTAAMLAATVFFFVERDRVHGKWKTSLSVAGLVTGVAFWHYLYMRGVWADTGTSPTVYRYIDWLITVPLQIIEFYLILKVCTNVSSGLFWKLLGASLVMLIAGFMGETGSAPANAAGIVGVIAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTIGWAIYPIGYWVGVGANADMANANLIYNYADFINKIAFGLAIYVAAVSDSE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAATTTTTATTAACACTTGCAGGCGTGGTTGCGCTTCCTGCTTTTGCT---------TCAGATCTAAGCACAAGCGATATGACAGGAATGTCATTCTGGATAGTAACTGCTGCTATGCTTGCTGCTACAGTATTCTTCTTTGTTGAAAGAGATAGAGTACACGGC---AAATGGAAAACTTCATTATCAGTTGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTATCTATATATGAGAGGTGTTTGGGCC------------------------------GATACA---------------------GGTACATCTCCTACCGTATACAGATATATCGACTGG------------------------TTAATTACAGTGCCGCTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTT---------TGC---ACTAACGTAAGCTCT---GGTCTT------------------------------------TTCTGGAAA---CTACTTGGAGCATCTTTAGTAATGCTTATTGCTGGTTTCATGGGAGAA---------ACT------------------GGT------TCT---------------------------------GCT------------------------------------------------------------------CCAGCT------------------AATGCAGCT---GGTATCGTTGGAGTAATTGCTTGGTTATATATCATTTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCTGCTGCT---CAA---AGT---GCC---TTT---GGA---ACAATT---AGATTAATTGTTACTATA---------------------------------------------------------------GGTTGG---------GCTATTTATCCAATAGGATATTGGGTAGGTGTCGGA---------------------------------------GCAAATGCT---GACATGGCAAACGCTAACTTAATATACAACTATGCTGATTTTATTAACAAAATCGCATTTGGTTTAGCTATTTATGTAGCTGCTGTTAGCGAC---TCAGAA--------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------MKFLLTLAGVVALPAFA---SDLSTSDMTGMSFWIVTAAMLAATVFFFVERDRVHG-KWKTSLSVAGLVTGVAFWHYLYMRGVWA----------DT-------GTSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWK-LLGASLVMLIAGFMGE---T------G--S-----------A----------------------PA------NAA-GIVGVIAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTI---------------------GW---AIYPIGYWVGVG-------------ANA-DMANANLIYNYADFINKIAFGLAIYVAAVSD-SE--------------------------------------- [IV-Gamma5-SAR86a]_1105152182854 [IV-Gamma5-SAR86a] JCVI_ORF_1105152182854_GS000b_Open_Ocean_5m jcvi|1105152182854| 1105152182854 JCVI ORF 1105152182854 1105152182854 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.22_0.8 other #na 26-FEB-2003 Open_Ocean/5m_depth/S_36.7_psu/GS000b/Sargasso_Station_11/Sargasso_Sea Sargasso Sea marine 31.175 -64.32433 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TTGCTCCACTACTTATATAAGGAGTTATATATGAAATTTTTATTAACACTTGCAGGCGTGGTTGCGCTTCCTGCTTTTGCTTCAGATCTAAGCACAAGTGATATGACAGGAATGTCATTCTGGATAGTAACTGCTGCTATGCTTGCTGCTACAGTATTCTTCTTTGTTGAAAGAGATAGAGTACACGGCAAATGGAAAACTTCATTATCAGTTGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTATCTATATATGAGAGGTGTTTGGGCCGATACAGGTACATCTCCTACCGTATACAGATATATCGACTGGTTAATTACAGTGCCGCTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTTTGCACTAACGTAAGCTCTGGTCTTTTCTGGAAACTGCTTGGAGCATCTTTAGTAATGCTTATTGCTGGTTTCATGGGAGAAACTGGTTCTGCTCCAGCTAATGCAGCTGGTATCGTTGGAGTAATTGCTTGGTTATATATCATTTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCTGCTGCTCAAAGTGCCTTTGGAACAATTAGATTAATTGTTACTATAGGTTGGGCTATTTATCCAATAGGATATTGGGTAGGTGTCGGAGCAAATGCTGACATGGCAAACGCTAACTTAATATACAACTATGCTGATTTTATTAACAAAATCGCATTTGGTTTAGCTATTTATGTAGCTGCTGTTAGCGACTCAAATAATATTTTTTATTCAGAAAAACCAGCT LLHYLYKELYMKFLLTLAGVVALPAFASDLSTSDMTGMSFWIVTAAMLAATVFFFVERDRVHGKWKTSLSVAGLVTGVAFWHYLYMRGVWADTGTSPTVYRYIDWLITVPLQIIEFYLILKVCTNVSSGLFWKLLGASLVMLIAGFMGETGSAPANAAGIVGVIAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTIGWAIYPIGYWVGVGANADMANANLIYNYADFINKIAFGLAIYVAAVSDSNNIFYSEKPA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTCCACTACTTATATAAGGAGTTATATATGAAATTTTTATTAACACTTGCAGGCGTGGTTGCGCTTCCTGCTTTTGCT---------TCAGATCTAAGCACAAGTGATATGACAGGAATGTCATTCTGGATAGTAACTGCTGCTATGCTTGCTGCTACAGTATTCTTCTTTGTTGAAAGAGATAGAGTACACGGC---AAATGGAAAACTTCATTATCAGTTGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTATCTATATATGAGAGGTGTTTGGGCC------------------------------GATACA---------------------GGTACATCTCCTACCGTATACAGATATATCGACTGG------------------------TTAATTACAGTGCCGCTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTT---------TGC---ACTAACGTAAGCTCT---GGTCTT------------------------------------TTCTGGAAA---CTGCTTGGAGCATCTTTAGTAATGCTTATTGCTGGTTTCATGGGAGAA---------ACT------------------GGT------TCT---------------------------------GCT------------------------------------------------------------------CCAGCT------------------AATGCAGCT---GGTATCGTTGGAGTAATTGCTTGGTTATATATCATTTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCTGCTGCT---CAA---AGT---GCC---TTT---GGA---ACAATT---AGATTAATTGTTACTATA---------------------------------------------------------------GGTTGG---------GCTATTTATCCAATAGGATATTGGGTAGGTGTCGGA---------------------------------------GCAAATGCT---GACATGGCAAACGCTAACTTAATATACAACTATGCTGATTTTATTAACAAAATCGCATTTGGTTTAGCTATTTATGTAGCTGCTGTTAGCGAC---TCAAATAATATTTTTTATTCAGAAAAA---------------------CCAGCT--------------------------------------------------------------------- ---------------------------------------------------------------------------------------LLHYLYKELYMKFLLTLAGVVALPAFA---SDLSTSDMTGMSFWIVTAAMLAATVFFFVERDRVHG-KWKTSLSVAGLVTGVAFWHYLYMRGVWA----------DT-------GTSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWK-LLGASLVMLIAGFMGE---T------G--S-----------A----------------------PA------NAA-GIVGVIAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTI---------------------GW---AIYPIGYWVGVG-------------ANA-DMANANLIYNYADFINKIAFGLAIYVAAVSD-SNNIFYSEK-------PA----------------------- [IV-Gamma5-SAR86a]_1105130692212 [IV-Gamma5-SAR86a] JCVI_ORF_1105130692212_GS017_Open_Ocean_2m jcvi|1105130692212| 1105130692212 JCVI ORF 1105130692212 1105130692212 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 09-janv-04 Open_Ocean/2m_depth/S_35.8_psu/GS017/Yucatan_Channel/Caribbean_Sea Caribbean Sea marine 20.5225 -85.41361 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TTGCTCCACTACTTATATAAGGAGTTATATATGAAATTTTTATTAACACTTGCAGGCGTGGTTGCGCTTCCTGCTTTTGCTTCAGATCTAAGCACAAGTGATATGACAGGAATGTCATTCTGGATAGTAACTGCTGCTATGCTTGCTGCTACAGTATTCTTCTTTGTTGAAAGAGATAGAGTACACGGCAAATGGAAAACTTCATTATCAGTTGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTATCTATATATGAGAGGTGTTTGGGCCGATACAGGTACATCTCCTACCGTATACAGATATATCGACTGGTTAATTACAGTGCCGCTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTTTGCACTAACGTAAGCTCTGGTCTTTTCTGGAAACTGCTTGGAGCATCTTTAGTAATGCTTATTGCTGGTTTCATGGGAGAAACTGGTTCTGCTCCAGCTAATGCAGCTGGTATCGTTGGAGTAATTGCTTGGTTATATATCATTTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCTGCTGCTCAAAGTGCCTTTGGAACAATTAGATTAATTGTTACTATAGGTTGGGCTATTTATCCAATAGGATATTGGGTAGGTGTCGGAGCAAATGCTGACATGGCAAACGCTAACTTAATATACAACTATGCTGATTTTATTAACAAAATCGCATTTGGTTTAGCTATTTATGTAGCTGCTGTTAGCGACTCAGAA LLHYLYKELYMKFLLTLAGVVALPAFASDLSTSDMTGMSFWIVTAAMLAATVFFFVERDRVHGKWKTSLSVAGLVTGVAFWHYLYMRGVWADTGTSPTVYRYIDWLITVPLQIIEFYLILKVCTNVSSGLFWKLLGASLVMLIAGFMGETGSAPANAAGIVGVIAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTIGWAIYPIGYWVGVGANADMANANLIYNYADFINKIAFGLAIYVAAVSDSE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTCCACTACTTATATAAGGAGTTATATATGAAATTTTTATTAACACTTGCAGGCGTGGTTGCGCTTCCTGCTTTTGCT---------TCAGATCTAAGCACAAGTGATATGACAGGAATGTCATTCTGGATAGTAACTGCTGCTATGCTTGCTGCTACAGTATTCTTCTTTGTTGAAAGAGATAGAGTACACGGC---AAATGGAAAACTTCATTATCAGTTGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTATCTATATATGAGAGGTGTTTGGGCC------------------------------GATACA---------------------GGTACATCTCCTACCGTATACAGATATATCGACTGG------------------------TTAATTACAGTGCCGCTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTT---------TGC---ACTAACGTAAGCTCT---GGTCTT------------------------------------TTCTGGAAA---CTGCTTGGAGCATCTTTAGTAATGCTTATTGCTGGTTTCATGGGAGAA---------ACT------------------GGT------TCT---------------------------------GCT------------------------------------------------------------------CCAGCT------------------AATGCAGCT---GGTATCGTTGGAGTAATTGCTTGGTTATATATCATTTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCTGCTGCT---CAA---AGT---GCC---TTT---GGA---ACAATT---AGATTAATTGTTACTATA---------------------------------------------------------------GGTTGG---------GCTATTTATCCAATAGGATATTGGGTAGGTGTCGGA---------------------------------------GCAAATGCT---GACATGGCAAACGCTAACTTAATATACAACTATGCTGATTTTATTAACAAAATCGCATTTGGTTTAGCTATTTATGTAGCTGCTGTTAGCGAC---TCAGAA--------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------LLHYLYKELYMKFLLTLAGVVALPAFA---SDLSTSDMTGMSFWIVTAAMLAATVFFFVERDRVHG-KWKTSLSVAGLVTGVAFWHYLYMRGVWA----------DT-------GTSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWK-LLGASLVMLIAGFMGE---T------G--S-----------A----------------------PA------NAA-GIVGVIAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTI---------------------GW---AIYPIGYWVGVG-------------ANA-DMANANLIYNYADFINKIAFGLAIYVAAVSD-SE--------------------------------------- [IV-Gamma5-SAR86a]_1105124622454 [IV-Gamma5-SAR86a] JCVI_ORF_1105124622454_GS000d_Open_Ocean_5m jcvi|1105124622454| 1105124622454 JCVI ORF 1105124622454 1105124622454 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.22_0.8 other #na 26-FEB-2003 Open_Ocean/5m_depth/S_36.6_psu/GS000d/Sargasso_Station_13/Sargasso_Sea Sargasso Sea marine 31.175 -64.32433 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAATTTTTATTAACACTTGCAGGCGTGGTTGCGCTTCCTGCTTTTGCTTCAGATCTAAGCACAAGTGATATGACAGGAATGTCATTCTGGATAGTAACTGCTGCTATGCTTGCTGCTACAGTATTCTTCTTTGTTGAAAGAGATAGAGTACACGGCAAATGGAAAACTTCATTATCAGTTGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTATCTATATATGAGAGGTGTTTGGGCCGATACAGGTACATCTCCTACCGTATACAGATATATCGACTGGTTAATTACAGTGCCGCTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTTTGCACTAACGTAAGCTCTGGTCTTTTCTGGAAACTGCTTGGAGCATCTTTAGTAATGCTTATTGCTGGTTTCATGGGAGAAACTGGTTCTGCTCCAGCTAATGCAGCTGGTATCGTTGGAGTAATTGCTTGGTTATATATCATTTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCTGCTGCTCAAAGTGCCTTTGGAACAATTAGATTAATTGTTACTATAGGTTGGGCTATTTATCCAATAGGATATTGGGTAGGTGTCGGAGCAAATGCTGACATGGCAAACGCTAACTTAATATACAACTATGCTGATTTTATTAACAAAATCGCATTTGGTTTAGCTATTTATGTAGCTGCTGTTAGCGACTCAGAA MKFLLTLAGVVALPAFASDLSTSDMTGMSFWIVTAAMLAATVFFFVERDRVHGKWKTSLSVAGLVTGVAFWHYLYMRGVWADTGTSPTVYRYIDWLITVPLQIIEFYLILKVCTNVSSGLFWKLLGASLVMLIAGFMGETGSAPANAAGIVGVIAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTIGWAIYPIGYWVGVGANADMANANLIYNYADFINKIAFGLAIYVAAVSDSE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAATTTTTATTAACACTTGCAGGCGTGGTTGCGCTTCCTGCTTTTGCT---------TCAGATCTAAGCACAAGTGATATGACAGGAATGTCATTCTGGATAGTAACTGCTGCTATGCTTGCTGCTACAGTATTCTTCTTTGTTGAAAGAGATAGAGTACACGGC---AAATGGAAAACTTCATTATCAGTTGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTATCTATATATGAGAGGTGTTTGGGCC------------------------------GATACA---------------------GGTACATCTCCTACCGTATACAGATATATCGACTGG------------------------TTAATTACAGTGCCGCTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTT---------TGC---ACTAACGTAAGCTCT---GGTCTT------------------------------------TTCTGGAAA---CTGCTTGGAGCATCTTTAGTAATGCTTATTGCTGGTTTCATGGGAGAA---------ACT------------------GGT------TCT---------------------------------GCT------------------------------------------------------------------CCAGCT------------------AATGCAGCT---GGTATCGTTGGAGTAATTGCTTGGTTATATATCATTTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCTGCTGCT---CAA---AGT---GCC---TTT---GGA---ACAATT---AGATTAATTGTTACTATA---------------------------------------------------------------GGTTGG---------GCTATTTATCCAATAGGATATTGGGTAGGTGTCGGA---------------------------------------GCAAATGCT---GACATGGCAAACGCTAACTTAATATACAACTATGCTGATTTTATTAACAAAATCGCATTTGGTTTAGCTATTTATGTAGCTGCTGTTAGCGAC---TCAGAA--------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------MKFLLTLAGVVALPAFA---SDLSTSDMTGMSFWIVTAAMLAATVFFFVERDRVHG-KWKTSLSVAGLVTGVAFWHYLYMRGVWA----------DT-------GTSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWK-LLGASLVMLIAGFMGE---T------G--S-----------A----------------------PA------NAA-GIVGVIAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTI---------------------GW---AIYPIGYWVGVG-------------ANA-DMANANLIYNYADFINKIAFGLAIYVAAVSD-SE--------------------------------------- [IV-Gamma5-SAR86a]_1105123109442 [IV-Gamma5-SAR86a] JCVI_ORF_1105123109442_GS023_Open_Ocean_2m jcvi|1105123109442| 1105123109442 JCVI ORF 1105123109442 1105123109442 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 21-janv-04 Open_Ocean/2m_depth/S_32.6_psu/GS023/30_miles_from_Cocos_Island/Eastern_Tropical_Pacific Pacific Ocean marine 5.64 -86.56528 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATATATGAATTTTTATTAACACTTGCAGGCGTGGTTGCGCTTCCTGCTTCCCTTTCAGATCTAAGCACAAGTGATATGACAGGAATGTCATTCTGGATAGTAACTGCTGCTATGCTTGCTGCTACAGTATTCTTCTTTGTTGAAAGAGATAGAGTACATGGCAAATGGAAAACTTCATTATCAGTTGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTATCTATATATGAGAGGTGTTTGGGCCGATACAGGTACATCTCCTACCGTATATAGATATATCGACTGGTTAATTACAGTGCCGCTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTTTGCACTAACGTAAGCTCTGGTCTTTTCTGGAAACTACTTGGAGCATCTTTAGTAATGCTTATTGCTGGTTTCATGGGAGAAACTGGTTCTGCTCCAGCTAATGCAGCTGGTATCGTTGGAGTAATTGCTTGGTTATATATCATTTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCTGCTGCTCAAAGTGCCTTTGGAACAATTAGATTAATTGTTACTATAGGTTGGGCTATTTATCCAATAGGATATTGGGTAGGTGTCGGAGCAAATGCTGACATGGCAAACGCTAACTTAATATACAACTATGCTGATTTTATTAACAAAATCGCATTTGGTTTAGCTATTTATGTAGCTGCTGTTAGCGACTCAGAA IYEFLLTLAGVVALPASLSDLSTSDMTGMSFWIVTAAMLAATVFFFVERDRVHGKWKTSLSVAGLVTGVAFWHYLYMRGVWADTGTSPTVYRYIDWLITVPLQIIEFYLILKVCTNVSSGLFWKLLGASLVMLIAGFMGETGSAPANAAGIVGVIAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTIGWAIYPIGYWVGVGANADMANANLIYNYADFINKIAFGLAIYVAAVSDSE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATATGAATTTTTATTAACACTTGCAGGCGTGGTTGCGCTTCCTGCTTCCCTT---------TCAGATCTAAGCACAAGTGATATGACAGGAATGTCATTCTGGATAGTAACTGCTGCTATGCTTGCTGCTACAGTATTCTTCTTTGTTGAAAGAGATAGAGTACATGGC---AAATGGAAAACTTCATTATCAGTTGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTATCTATATATGAGAGGTGTTTGGGCC------------------------------GATACA---------------------GGTACATCTCCTACCGTATATAGATATATCGACTGG------------------------TTAATTACAGTGCCGCTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTT---------TGC---ACTAACGTAAGCTCT---GGTCTT------------------------------------TTCTGGAAA---CTACTTGGAGCATCTTTAGTAATGCTTATTGCTGGTTTCATGGGAGAA---------ACT------------------GGT------TCT---------------------------------GCT------------------------------------------------------------------CCAGCT------------------AATGCAGCT---GGTATCGTTGGAGTAATTGCTTGGTTATATATCATTTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCTGCTGCT---CAA---AGT---GCC---TTT---GGA---ACAATT---AGATTAATTGTTACTATA---------------------------------------------------------------GGTTGG---------GCTATTTATCCAATAGGATATTGGGTAGGTGTCGGA---------------------------------------GCAAATGCT---GACATGGCAAACGCTAACTTAATATACAACTATGCTGATTTTATTAACAAAATCGCATTTGGTTTAGCTATTTATGTAGCTGCTGTTAGCGAC---TCAGAA--------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------IYEFLLTLAGVVALPASL---SDLSTSDMTGMSFWIVTAAMLAATVFFFVERDRVHG-KWKTSLSVAGLVTGVAFWHYLYMRGVWA----------DT-------GTSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWK-LLGASLVMLIAGFMGE---T------G--S-----------A----------------------PA------NAA-GIVGVIAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTI---------------------GW---AIYPIGYWVGVG-------------ANA-DMANANLIYNYADFINKIAFGLAIYVAAVSD-SE--------------------------------------- [IV-Gamma5-SAR86a]_1105084691764 [IV-Gamma5-SAR86a] JCVI_ORF_1105084691764 jcvi|1105084691764| 1105084691764 JCVI ORF 1105084691764 1105084691764 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 09-janv-04 Open_Ocean/2m_depth/S_35.8_psu/GS017/Yucatan_Channel/Caribbean_Sea Caribbean Sea marine 20.5225 -85.41361 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TTGCTCCACTACTTATATAAGGAGTTATATATGAAATTTTTATTAACACTTGCAGGCGTGGTTGCGCTTCCTGCTTTTGCTTCAGATCTAAGCACAAGTGATATGACAGGAATGTCATTTTGGATAGTAACTGCTGCTATGCTTGCTGCTACAGTATTCTTCTTTGTTGAAAGAGATAGAGTACACGGCAAATGGAAAACTTCATTATCAGTTGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTATCTATATATGAGAGGTGTTTGGGCCGATACAGGTACATCTCCTACCGTATACAGATATATCGACTGGTTAATTACAGTGCCGCTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTTTGCACTAACGTAAGCTCTGGTCTTTTCTGGAAACTGCTTGGAGCATCTTTAGTAATGCTTATTGCTGGTTTCATGGGAGAAACTGGTTCTGCTCCAGCTAATGCAGCTGGTATCGTTGGAGTAATTGCTTGGTTATATATCATTTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCTGCTGCTCAAAGTGCCTTTGGAACAATTAGATTAATTGTTACTATAGGTTGGGCTATTTATCCAATAGGATATTGGGTAGGGTCGAGCTGCAAGACCGTA LLHYLYKELYMKFLLTLAGVVALPAFASDLSTSDMTGMSFWIVTAAMLAATVFFFVERDRVHGKWKTSLSVAGLVTGVAFWHYLYMRGVWADTGTSPTVYRYIDWLITVPLQIIEFYLILKVCTNVSSGLFWKLLGASLVMLIAGFMGETGSAPANAAGIVGVIAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTIGWAIYPIGYWVGSSCKTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTCCACTACTTATATAAGGAGTTATATATGAAATTTTTATTAACACTTGCAGGCGTGGTTGCGCTTCCTGCTTTTGCT---------TCAGATCTAAGCACAAGTGATATGACAGGAATGTCATTTTGGATAGTAACTGCTGCTATGCTTGCTGCTACAGTATTCTTCTTTGTTGAAAGAGATAGAGTACACGGC---AAATGGAAAACTTCATTATCAGTTGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTATCTATATATGAGAGGTGTTTGGGCC------------------------------GATACA---------------------GGTACATCTCCTACCGTATACAGATATATCGACTGG------------------------TTAATTACAGTGCCGCTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTT---------TGC---ACTAACGTAAGCTCT---GGTCTT------------------------------------TTCTGGAAA---CTGCTTGGAGCATCTTTAGTAATGCTTATTGCTGGTTTCATGGGAGAA---------ACT------------------GGT------TCT---------------------------------GCT------------------------------------------------------------------CCAGCT------------------AATGCAGCT---GGTATCGTTGGAGTAATTGCTTGGTTATATATCATTTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCTGCTGCT---CAA---AGT---GCC---TTT---GGA---ACAATT---AGATTAATTGTTACTATA---------------------------------------------------------------GGTTGG---------GCTATTTATCCAATAGGATATTGGGTAGGGTCGAGC---------------------------------------TGCAAGACC---GTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------LLHYLYKELYMKFLLTLAGVVALPAFA---SDLSTSDMTGMSFWIVTAAMLAATVFFFVERDRVHG-KWKTSLSVAGLVTGVAFWHYLYMRGVWA----------DT-------GTSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWK-LLGASLVMLIAGFMGE---T------G--S-----------A----------------------PA------NAA-GIVGVIAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTI---------------------GW---AIYPIGYWVGSS-------------CKT-V------------------------------------------------------------------------ [IV-Gamma5-SAR86a]_1112707128095 [IV-Gamma5-SAR86a] JCVI_ORF_1112707128095 jcvi|1112707128095| 1112707128095 JCVI ORF 1112707128095 1112707128095 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 12-sept-05 Harbor/2m_depth/S_n.a/GS149/West_coast_Zanzibar_[Tanzania)/harbour_region/Indian_Ocean Indian Ocean marine -6.116667 39.116665 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TTGCTCCACTACTTATATAAGGAGTTATATATGAAATTTTTATTAACACTTGCAGGCGTGGTTGCGCTTCCTGCTTTTGCTTCAGATCTAAGCACAAGTGATATGACAGGAATGTCATTCTGGATAGTAACTGCTGCTATGCTTGCTGCTACAGTATTCTTTTTTGTTGAAAGAGATAGAGTACACGGCAAATGGAAAACTTCATTATCAGTTGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTATCTATATATGAGAGGTGTTTGGGCCGATACAGGTACATCTCCTACCGTATACAGATATATCGACTGGTTAATTACAGTGCCGCTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTTTGCACTAACGTAAGCTCTGGTCTTTTCTGGAAACTGCTTGGAGCATCTTTAGTAATGCTTATTGCTGGTTTCATGGGAGAAACTGGTTCTGCTCCAGCTAATGCAGCTGGTATCGTTGGAGTAATTGCTTGGTTATATATCATTTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCTGCTGCTCAAAGTGCCTTTGGAACAATTAGATTAATTGTTACT LLHYLYKELYMKFLLTLAGVVALPAFASDLSTSDMTGMSFWIVTAAMLAATVFFFVERDRVHGKWKTSLSVAGLVTGVAFWHYLYMRGVWADTGTSPTVYRYIDWLITVPLQIIEFYLILKVCTNVSSGLFWKLLGASLVMLIAGFMGETGSAPANAAGIVGVIAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTCCACTACTTATATAAGGAGTTATATATGAAATTTTTATTAACACTTGCAGGCGTGGTTGCGCTTCCTGCTTTTGCT---------TCAGATCTAAGCACAAGTGATATGACAGGAATGTCATTCTGGATAGTAACTGCTGCTATGCTTGCTGCTACAGTATTCTTTTTTGTTGAAAGAGATAGAGTACACGGC---AAATGGAAAACTTCATTATCAGTTGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTATCTATATATGAGAGGTGTTTGGGCC------------------------------GATACA---------------------GGTACATCTCCTACCGTATACAGATATATCGACTGG------------------------TTAATTACAGTGCCGCTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTT---------TGC---ACTAACGTAAGCTCT---GGTCTT------------------------------------TTCTGGAAA---CTGCTTGGAGCATCTTTAGTAATGCTTATTGCTGGTTTCATGGGAGAA---------ACT------------------GGT------TCT---------------------------------GCT------------------------------------------------------------------CCAGCT------------------AATGCAGCT---GGTATCGTTGGAGTAATTGCTTGGTTATATATCATTTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCTGCTGCT---CAA---AGT---GCC---TTT---GGA---ACAATT---AGATTAATTGTTACT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------LLHYLYKELYMKFLLTLAGVVALPAFA---SDLSTSDMTGMSFWIVTAAMLAATVFFFVERDRVHG-KWKTSLSVAGLVTGVAFWHYLYMRGVWA----------DT-------GTSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWK-LLGASLVMLIAGFMGE---T------G--S-----------A----------------------PA------NAA-GIVGVIAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVT--------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_1105122091496 [IV-Gamma5-SAR86a] JCVI_ORF_1105122091496 jcvi|1105122091496| 1105122091496 JCVI ORF 1105122091496 1105122091496 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 09-janv-04 Open_Ocean/2m_depth/S_35.8_psu/GS017/Yucatan_Channel/Caribbean_Sea Caribbean Sea marine 20.5225 -85.41361 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TTGCTCCACTACTTATATAAGGAGTTATATATGAAATTTTTATTAACACTTGCAGGCGTGGTTGCGCTTCCTGCTTTTGCTTCAGATCTAAGCACAAGTGATATGACAGGAATGTCATTCTGGATAGTAACTGCTGCTATGCTTGCTGCTACAGTATTCTTCTTTGTTGAAAGAGATAGAGTAAACGGCAAATGGAAAACTTCATTATCAGTTGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTATCTATATATGAGAGGTGTTTGGGCCGATACAGGTACATCTCCTACCGTATACAGATATATCGACTGGTTAATTACAGTGCCGCTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTTTGCACTAACGTAAGCTCTGGTCTTTTCTGGAAACTGCTTGGAGCATCTTTAGTAATGCTTATTGCTGGTTTCATGGGAGAAACTGGTTCTGCTCCTGCTAATGCAGCTGGTATCGTTGGAGTAATTGCTTGGTTATATATCATTTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCTGCTGCTCAAAGTGCCTTTGGAACAATTAGATTAATTGTACTA LLHYLYKELYMKFLLTLAGVVALPAFASDLSTSDMTGMSFWIVTAAMLAATVFFFVERDRVNGKWKTSLSVAGLVTGVAFWHYLYMRGVWADTGTSPTVYRYIDWLITVPLQIIEFYLILKVCTNVSSGLFWKLLGASLVMLIAGFMGETGSAPANAAGIVGVIAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTCCACTACTTATATAAGGAGTTATATATGAAATTTTTATTAACACTTGCAGGCGTGGTTGCGCTTCCTGCTTTTGCT---------TCAGATCTAAGCACAAGTGATATGACAGGAATGTCATTCTGGATAGTAACTGCTGCTATGCTTGCTGCTACAGTATTCTTCTTTGTTGAAAGAGATAGAGTAAACGGC---AAATGGAAAACTTCATTATCAGTTGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTATCTATATATGAGAGGTGTTTGGGCC------------------------------GATACA---------------------GGTACATCTCCTACCGTATACAGATATATCGACTGG------------------------TTAATTACAGTGCCGCTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTT---------TGC---ACTAACGTAAGCTCT---GGTCTT------------------------------------TTCTGGAAA---CTGCTTGGAGCATCTTTAGTAATGCTTATTGCTGGTTTCATGGGAGAA---------ACT------------------GGT------TCT---------------------------------GCT------------------------------------------------------------------CCTGCT------------------AATGCAGCT---GGTATCGTTGGAGTAATTGCTTGGTTATATATCATTTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCTGCTGCT---CAA---AGT---GCC---TTT---GGA---ACAATT---AGATTAATTGTACTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------LLHYLYKELYMKFLLTLAGVVALPAFA---SDLSTSDMTGMSFWIVTAAMLAATVFFFVERDRVNG-KWKTSLSVAGLVTGVAFWHYLYMRGVWA----------DT-------GTSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWK-LLGASLVMLIAGFMGE---T------G--S-----------A----------------------PA------NAA-GIVGVIAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVL--------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_1112732917087 [IV-Gamma5-SAR86a] JCVI_ORF_1112732917087 jcvi|1112732917087| 1112732917087 JCVI ORF 1112732917087 1112732917087 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 17-MAY-2004 Coastal/2m_depth/S_32.6_psu/GS049/Moorea/Outside_Cooks_Bay/Polynesia_Archipelagos Pacific Ocean marine -17.453056 -149.79889 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf GGGAGTAAATTATTGCTCCACTACTTATATAAGGAGTTATATATGAAATTTTTATTAACACTTGCAGGCGTGGTTGCGCTTCCTGCTTTTGCTTCAGATCTAAGCACAAGTGATATGACAGGAATGTCATTCTGGATAGTAACTGCTGCTATGCTTGCTGCTACAGTATTCTTCTTTGTTGAAAGAGATAGAGTACACGGCAAATGGAAAACTTCATTATCAGTTGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTATCTATATATGAGAGGTGTTTGGGCCGATACAGGTACATCTCCTACCGTATACAGATATATCGACTGGTTAATTACAGTGCCGCTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTTTGTACTAACGTAAGCTCTGGTCTTTTCTGGAAACTGCTTGGAGCATCTTTAGTAATGCTTATTGCTGGTTTCATGGGAGAAACTGGTTCTGCTCCAGCTAATGCAGCTGGTATCGTTGGAGTAATTGCTTGGTTATATATCATTTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCTGCTGCTCAAAGTGCCTTTGGAACAATTAGATTAATTGTTACTATAGGTTGGGCTATTTATCCAATAGGATATTGGGTAGGTGTCGGAGCAAATGCTGACATGGCAAACGCTAACTTAATATACAACTATGCTGATTTTATTAACAAAATCGCATTTGGTTTAGCT GSKLLLHYLYKELYMKFLLTLAGVVALPAFASDLSTSDMTGMSFWIVTAAMLAATVFFFVERDRVHGKWKTSLSVAGLVTGVAFWHYLYMRGVWADTGTSPTVYRYIDWLITVPLQIIEFYLILKVCTNVSSGLFWKLLGASLVMLIAGFMGETGSAPANAAGIVGVIAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTIGWAIYPIGYWVGVGANADMANANLIYNYADFINKIAFGLA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGAGTAAATTATTGCTCCACTACTTATATAAGGAGTTATATATGAAATTTTTATTAACACTTGCAGGCGTGGTTGCGCTTCCTGCTTTTGCT---------TCAGATCTAAGCACAAGTGATATGACAGGAATGTCATTCTGGATAGTAACTGCTGCTATGCTTGCTGCTACAGTATTCTTCTTTGTTGAAAGAGATAGAGTACACGGC---AAATGGAAAACTTCATTATCAGTTGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTATCTATATATGAGAGGTGTTTGGGCC------------------------------GATACA---------------------GGTACATCTCCTACCGTATACAGATATATCGACTGG------------------------TTAATTACAGTGCCGCTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTT---------TGT---ACTAACGTAAGCTCT---GGTCTT------------------------------------TTCTGGAAA---CTGCTTGGAGCATCTTTAGTAATGCTTATTGCTGGTTTCATGGGAGAA---------ACT------------------GGT------TCT---------------------------------GCT------------------------------------------------------------------CCAGCT------------------AATGCAGCT---GGTATCGTTGGAGTAATTGCTTGGTTATATATCATTTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCTGCTGCT---CAA---AGT---GCC---TTT---GGA---ACAATT---AGATTAATTGTTACTATA---------------------------------------------------------------GGTTGG---------GCTATTTATCCAATAGGATATTGGGTAGGTGTCGGA---------------------------------------GCAAATGCT---GACATGGCAAACGCTAACTTAATATACAACTATGCTGATTTTATTAACAAAATCGCATTTGGTTTAGCT------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------GSKLLLHYLYKELYMKFLLTLAGVVALPAFA---SDLSTSDMTGMSFWIVTAAMLAATVFFFVERDRVHG-KWKTSLSVAGLVTGVAFWHYLYMRGVWA----------DT-------GTSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWK-LLGASLVMLIAGFMGE---T------G--S-----------A----------------------PA------NAA-GIVGVIAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTI---------------------GW---AIYPIGYWVGVG-------------ANA-DMANANLIYNYADFINKIAFGLA-------------------------------------------------- [IV-Gamma5-SAR86a]_EU915804 [IV-Gamma5-SAR86a] PF92092_env_samples_EU915804 gi|229358490|gb|EU915804| Uncultured microorganism clone PF92092 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF92092 putative proteorhodopsin gene, partial cds EU915804 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTAGCCGCTACTGCATTCTTCTTTGTAGAAAGAGACAGAGTACATGGCAAATGGAAAACTTCATTATCAGTCGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTATCTATATATGAGAGGTGTTTGGGCCGATACAGGTACATCACCAACTGTATACAGATACATTGACTGGCTAATTACTGTGCCACTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTATGCACAAACGTAAGCTCTGGTCTATTCTGGAAACTACTTGGAGCATCATTAGTAATGCTTATCGCTGGTTTCATGGGAGAAACTGGATCTGCTCCAGCAAATGCTGCTGGTATCGTTGGAGTAATCGCTTGGTTATATATCATTTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCCGCTGCTCAAAGTGCCTTCGGAACAATTAGATTAATTGTTACTATAGGGTGGGCCATATAC MVAATAFFFVERDRVHGKWKTSLSVAGLVTGVAFWHYLYMRGVWADTGTSPTVYRYIDWLITVPLQIIEFYLILKVCTNVSSGLFWKLLGASLVMLIAGFMGETGSAPANAAGIVGVIAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGCATTCTTCTTTGTAGAAAGAGACAGAGTACATGGC---AAATGGAAAACTTCATTATCAGTCGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTATCTATATATGAGAGGTGTTTGGGCC------------------------------GATACA---------------------GGTACATCACCAACTGTATACAGATACATTGACTGG------------------------CTAATTACTGTGCCACTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTA---------TGC---ACAAACGTAAGCTCT---GGTCTA------------------------------------TTCTGGAAA---CTACTTGGAGCATCATTAGTAATGCTTATCGCTGGTTTCATGGGAGAA---------ACT------------------GGA------TCT---------------------------------GCT------------------------------------------------------------------CCAGCA------------------AATGCTGCT---GGTATCGTTGGAGTAATCGCTTGGTTATATATCATTTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCCGCTGCT---CAA---AGT---GCC---TTC---GGA---ACAATT---AGATTAATTGTTACTATA---------------------------------------------------------------GGGTGG---------GCCATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFVERDRVHG-KWKTSLSVAGLVTGVAFWHYLYMRGVWA----------DT-------GTSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWK-LLGASLVMLIAGFMGE---T------G--S-----------A----------------------PA------NAA-GIVGVIAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_EU915772 [IV-Gamma5-SAR86a] PF97514_env_samples_EU915772 gi|229358426|gb|EU915772| Uncultured microorganism clone PF97514 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF97514 putative proteorhodopsin gene, partial cds EU915772 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTAGCCGCTACTGCATTCTTCTTTGTAGAAAGAGACAGAGTACATGGCAAATGGAAAACTTCATTATCAGTCGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTATCTATATATGAGAGGTGTTTGGGCCGATACAGGTACATCACCAACTGTATACAGATACATTGACTGGCTAATTACTGTGCCACTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTATGCACAAACGTAAGCTCTGGTCTATTCTGGAAACTACTTGGAGCATCATTAGTGATGCTTATCGCTGGTTTCATGGGAGAAACTGGATCTGCTCCAGCAAATGCTGCTGGTATCGTTGGAGTAATCGCTTGGTTATATATCATTTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCCGCAGCTCAAAGTGCCTTCGGAACAATTAGATTAATTGTTACTATAGGCTGGGCTATCTAT MVAATAFFFVERDRVHGKWKTSLSVAGLVTGVAFWHYLYMRGVWADTGTSPTVYRYIDWLITVPLQIIEFYLILKVCTNVSSGLFWKLLGASLVMLIAGFMGETGSAPANAAGIVGVIAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGCATTCTTCTTTGTAGAAAGAGACAGAGTACATGGC---AAATGGAAAACTTCATTATCAGTCGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTATCTATATATGAGAGGTGTTTGGGCC------------------------------GATACA---------------------GGTACATCACCAACTGTATACAGATACATTGACTGG------------------------CTAATTACTGTGCCACTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTA---------TGC---ACAAACGTAAGCTCT---GGTCTA------------------------------------TTCTGGAAA---CTACTTGGAGCATCATTAGTGATGCTTATCGCTGGTTTCATGGGAGAA---------ACT------------------GGA------TCT---------------------------------GCT------------------------------------------------------------------CCAGCA------------------AATGCTGCT---GGTATCGTTGGAGTAATCGCTTGGTTATATATCATTTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCCGCAGCT---CAA---AGT---GCC---TTC---GGA---ACAATT---AGATTAATTGTTACTATA---------------------------------------------------------------GGCTGG---------GCTATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFVERDRVHG-KWKTSLSVAGLVTGVAFWHYLYMRGVWA----------DT-------GTSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWK-LLGASLVMLIAGFMGE---T------G--S-----------A----------------------PA------NAA-GIVGVIAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_EU915798 [IV-Gamma5-SAR86a] PF92068_env_samples_EU915798 gi|229358478|gb|EU915798| Uncultured microorganism clone PF92068 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF92068 putative proteorhodopsin gene, partial cds EU915798 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTGGCCGCTACTGCCTTCTTCTTTGTAGAAAGAGACAGAGTACACGGCAAATGGAAGACTTCATTATCAGTCGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTATCTATATATGAGAGGTGTTTGGGCCGATACAGGTACATCACCAACTGTATACAGATACATTGACTGGCTAATTACTGTGCCACTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTATGCACAAACGTAAGCTCTGGTCTATTCTGGAAACTACTTGGAGCATCATTAGTAATGCTTATCGCTGGTTTCATGGGAGAAACTGGATCTGCTCCAGCAAATGCTGCTGGTATCGTTGGAGTAATCGCTTGGTTATATATCATTTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCCGCTGCTCAAAGTGCCTTCGGAACAATTAGATTAATTGTTACTATAGGTTGGGCCATATAT MLAATAFFFVERDRVHGKWKTSLSVAGLVTGVAFWHYLYMRGVWADTGTSPTVYRYIDWLITVPLQIIEFYLILKVCTNVSSGLFWKLLGASLVMLIAGFMGETGSAPANAAGIVGVIAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGCCTTCTTCTTTGTAGAAAGAGACAGAGTACACGGC---AAATGGAAGACTTCATTATCAGTCGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTATCTATATATGAGAGGTGTTTGGGCC------------------------------GATACA---------------------GGTACATCACCAACTGTATACAGATACATTGACTGG------------------------CTAATTACTGTGCCACTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTA---------TGC---ACAAACGTAAGCTCT---GGTCTA------------------------------------TTCTGGAAA---CTACTTGGAGCATCATTAGTAATGCTTATCGCTGGTTTCATGGGAGAA---------ACT------------------GGA------TCT---------------------------------GCT------------------------------------------------------------------CCAGCA------------------AATGCTGCT---GGTATCGTTGGAGTAATCGCTTGGTTATATATCATTTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCCGCTGCT---CAA---AGT---GCC---TTC---GGA---ACAATT---AGATTAATTGTTACTATA---------------------------------------------------------------GGTTGG---------GCCATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFVERDRVHG-KWKTSLSVAGLVTGVAFWHYLYMRGVWA----------DT-------GTSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWK-LLGASLVMLIAGFMGE---T------G--S-----------A----------------------PA------NAA-GIVGVIAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_1112702435675 [IV-Gamma5-SAR86a] JCVI_ORF_1112702435675 jcvi|1112702435675| 1112702435675 JCVI ORF 1112702435675 1112702435675 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 11-sept-05 Fringing_Reef/1m_depth/S_n.a/GS148/East_coast_Zanzibar_[Tanzania)/offshore_Paje_lagoon/Indian_Ocean Indian Ocean marine -6.3166666 39.009167 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TTGCTCCACTACTTATATAAGGAGTTATATATGAAATTTTTATTAACACTTGCAGGCGTGGTTGCGCTTCCTGCTTTTGCTTCAGATCTAAGCACAAGCGATATGACAGGAATGTCATTTTGGATTGTAACTGCTGCTATGCTAGCTGCTACTGTATTCTTCTTTGTAGAAAGAGACAGAGTACACGGCAAATGGAAAACTTCATTATCAGTCGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTATCTATATATGAGAGGTGTTTGGGCCGATACAGGTACATCACCAACTGTATACAGATACATTGACTGGCTAATTACTGTGCCACTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTATGCACAAACGTAAGCTCTGGTCTATTCTGGAAACTACTTGGAGCATCATTAGTAATGCTTATCGCTGGTTTCATGGGAGAAACTGGATCTGCTCCAGCAAATGCTGCTGGTATCGTTGGAGTAATCGCTTGGTTATATATCATTTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCCGCTGCTCAAAGTGCC LLHYLYKELYMKFLLTLAGVVALPAFASDLSTSDMTGMSFWIVTAAMLAATVFFFVERDRVHGKWKTSLSVAGLVTGVAFWHYLYMRGVWADTGTSPTVYRYIDWLITVPLQIIEFYLILKVCTNVSSGLFWKLLGASLVMLIAGFMGETGSAPANAAGIVGVIAWLYIIYEVFSGEAGKLNASSGNAAAQSA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTCCACTACTTATATAAGGAGTTATATATGAAATTTTTATTAACACTTGCAGGCGTGGTTGCGCTTCCTGCTTTTGCT---------TCAGATCTAAGCACAAGCGATATGACAGGAATGTCATTTTGGATTGTAACTGCTGCTATGCTAGCTGCTACTGTATTCTTCTTTGTAGAAAGAGACAGAGTACACGGC---AAATGGAAAACTTCATTATCAGTCGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTATCTATATATGAGAGGTGTTTGGGCC------------------------------GATACA---------------------GGTACATCACCAACTGTATACAGATACATTGACTGG------------------------CTAATTACTGTGCCACTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTA---------TGC---ACAAACGTAAGCTCT---GGTCTA------------------------------------TTCTGGAAA---CTACTTGGAGCATCATTAGTAATGCTTATCGCTGGTTTCATGGGAGAA---------ACT------------------GGA------TCT---------------------------------GCT------------------------------------------------------------------CCAGCA------------------AATGCTGCT---GGTATCGTTGGAGTAATCGCTTGGTTATATATCATTTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCCGCTGCT---CAA---AGT---GCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------LLHYLYKELYMKFLLTLAGVVALPAFA---SDLSTSDMTGMSFWIVTAAMLAATVFFFVERDRVHG-KWKTSLSVAGLVTGVAFWHYLYMRGVWA----------DT-------GTSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWK-LLGASLVMLIAGFMGE---T------G--S-----------A----------------------PA------NAA-GIVGVIAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A---------------------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ887797 [IV-Gamma5-SAR86a] clone_PF10025_DQ887797 gi|116294294|gb|DQ887797| Uncultured bacterium clone PF10025 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF10025 putative proteorhodopsin gene, partial cds. DQ887797 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2007 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na GTATTAGCGGCTACTGTATTCTTCTTAGTCGAAAGAGATAGAGTACATGGCAAATGGGAAACTTCATTATCAGTTGCTGCTTTAGTTACTGGTGTGGCGTTTTGGCATTATTTTTATATGAGAGGAGTTTGGGCGGATACACAAACATCTCCTACTGTATTTAGATATGTTGACTGGTTAATTACTGTGCCACTTCAGATTATTGAGTTCTACTTAATTCTCAAAGTGTGTACTAACGTAAAATCTAGTCTTTTCTGGAAACTACTTGGAGCATCCTTAGTAATGCTTATAGCCGGTTTCATGGGAGAAACTAATATGGCTCCAGCTAATTTAGCTGGTATCATTGGAGTAATTGCTTGGTTATATATCATTTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCTGCTGCTCAAAGTGCCTTTGGAACAATTAGATTAATTGTTACTATAGGTTGGGCTATATATCCA VLAATVFFLVERDRVHGKWETSLSVAALVTGVAFWHYFYMRGVWADTQTSPTVFRYVDWLITVPLQIIEFYLILKVCTNVKSSLFWKLLGASLVMLIAGFMGETNMAPANLAGIIGVIAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGGCTACTGTATTCTTCTTAGTCGAAAGAGATAGAGTACATGGC---AAATGGGAAACTTCATTATCAGTTGCTGCTTTAGTTACTGGTGTGGCGTTTTGGCATTATTTTTATATGAGAGGAGTTTGGGCG------------------------------GATACA---------------------CAAACATCTCCTACTGTATTTAGATATGTTGACTGG------------------------TTAATTACTGTGCCACTTCAGATTATTGAGTTCTACTTAATTCTCAAAGTG---------TGT---ACTAACGTAAAATCT---AGTCTT------------------------------------TTCTGGAAA---CTACTTGGAGCATCCTTAGTAATGCTTATAGCCGGTTTCATGGGAGAA---------ACT------------------AAT------ATG---------------------------------GCT------------------------------------------------------------------CCAGCT------------------AATTTAGCT---GGTATCATTGGAGTAATTGCTTGGTTATATATCATTTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCTGCTGCT---CAA---AGT---GCC---TTT---GGA---ACAATT---AGATTAATTGTTACTATA---------------------------------------------------------------GGTTGG---------GCTATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------VLAATVFFLVERDRVHG-KWETSLSVAALVTGVAFWHYFYMRGVWA----------DT-------QTSPTVFRYVDW--------LITVPLQIIEFYLILKV---C-TNVKS-SL------------FWK-LLGASLVMLIAGFMGE---T------N--M-----------A----------------------PA------NLA-GIIGVIAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ927006 [IV-Gamma5-SAR86a] clone_PF91134_DQ927006 gi|116294127|gb|DQ927006| Uncultured bacterium clone PF91134 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF91134 putative proteorhodopsin gene, partial cds. DQ927006 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGGTAGCCGCTACTGTGTTCTTCTTAGTCGTAAGAGATAGAGTACATGGCAAATGGGAAACTTCATTATCAGTTGCTGCTTTAGTTACTGGTGTGGCGTTTTGGCATTATTTTTATATGAGAGGAGTTTGGGCGGATACACAAACATCTCCTACTGTATTTAGATATGTTGACTGGTTAATTACTGTGCCACTTCAGATTATTGAGTTCTACTTAATTCTCAAAGTGTGTACTAACGTAAAATCTAGTCTTTTCTGGAAACTACTTGGAGCATCCTTAGTAATGCTTATAGCCGGTTTCATGGGAGAAACTAATATGGCTCCAGCTAATTTAGCTGGTATCATTGGAGTAATTGCTTGGTTATATATCATTTATGGAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCTGCTGCTCAAAGTGCCTTTGGAACAATTAGATTAATTGTTACTATAGGCTGGGCAATCTATCCA MVAATVFFLVVRDRVHGKWETSLSVAALVTGVAFWHYFYMRGVWADTQTSPTVFRYVDWLITVPLQIIEFYLILKVCTNVKSSLFWKLLGASLVMLIAGFMGETNMAPANLAGIIGVIAWLYIIYGVFSGEAGKLNASSGNAAAQSAFGTIRLIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTGTTCTTCTTAGTCGTAAGAGATAGAGTACATGGC---AAATGGGAAACTTCATTATCAGTTGCTGCTTTAGTTACTGGTGTGGCGTTTTGGCATTATTTTTATATGAGAGGAGTTTGGGCG------------------------------GATACA---------------------CAAACATCTCCTACTGTATTTAGATATGTTGACTGG------------------------TTAATTACTGTGCCACTTCAGATTATTGAGTTCTACTTAATTCTCAAAGTG---------TGT---ACTAACGTAAAATCT---AGTCTT------------------------------------TTCTGGAAA---CTACTTGGAGCATCCTTAGTAATGCTTATAGCCGGTTTCATGGGAGAA---------ACT------------------AAT------ATG---------------------------------GCT------------------------------------------------------------------CCAGCT------------------AATTTAGCT---GGTATCATTGGAGTAATTGCTTGGTTATATATCATTTATGGAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCTGCTGCT---CAA---AGT---GCC---TTT---GGA---ACAATT---AGATTAATTGTTACTATA---------------------------------------------------------------GGCTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFLVVRDRVHG-KWETSLSVAALVTGVAFWHYFYMRGVWA----------DT-------QTSPTVFRYVDW--------LITVPLQIIEFYLILKV---C-TNVKS-SL------------FWK-LLGASLVMLIAGFMGE---T------N--M-----------A----------------------PA------NLA-GIIGVIAWLYIIYGV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_1112732135317 [IV-Gamma5-SAR86a] JCVI_ORF_1112732135317_GS117a_Coastal_sample_2m jcvi|1112732135317| 1112732135317 JCVI ORF 1112732135317 1112732135317 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 09-sept-05 Coastal_sample/2m_depth/S_35.5_psu/GS117a/St._Anne_Island/Seychelles/Indian_Ocean Indian Ocean marine -4.613611 55.50861 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGACAGGAATGTCATTCTGGATAGTTACTGCTGCCATGCTTGCTGCTACAGTATTCTTCTTCGTAGAAAGAGATAGAGTACATGGCAAATGGAAAACTTCATTATCAGTTGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTATATGTATATGAGAGGCGTTTGGGTTGATACTGGAACATCTCCAACTGTATATAGATATATTGACTGGTTAATTACAGTACCGCTTCAAATTATTGAGTTCTACTTGATTCTTAAAGTGTGTACTAATGTAAGTTCTAGCTTATTCTGGAAACTGCTTGTAGCATCTTTAGTTATGCTTGTTGCTGGTTTCATGGGAGAAACTGGAGCTGCTCCAGCTAATTTAGCTGGTATCGTAGGAGTACTTGCTTGGTTATATATCATTTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCTGCTGCTCAAAGTGCCTTTGGAACAATTAGATTAATTGTTACTGTGGGTTGGGCAATTTATCCAATAGGTTATTGGGTAGGTGTCGGAGCAAATGCTGACATGGCAAACGCTAACTTAATTTATAACTATGCTGATTTTCTTAATAAAATCGCATTTGGTTTAGCTATTTATGTAGCTGCTGTTAGCGACTCAGAA MTGMSFWIVTAAMLAATVFFFVERDRVHGKWKTSLSVAGLVTGVAFWHYMYMRGVWVDTGTSPTVYRYIDWLITVPLQIIEFYLILKVCTNVSSSLFWKLLVASLVMLVAGFMGETGAAPANLAGIVGVLAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYPIGYWVGVGANADMANANLIYNYADFLNKIAFGLAIYVAAVSDSE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGACAGGAATGTCATTCTGGATAGTTACTGCTGCCATGCTTGCTGCTACAGTATTCTTCTTCGTAGAAAGAGATAGAGTACATGGC---AAATGGAAAACTTCATTATCAGTTGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTATATGTATATGAGAGGCGTTTGGGTT------------------------------GATACT---------------------GGAACATCTCCAACTGTATATAGATATATTGACTGG------------------------TTAATTACAGTACCGCTTCAAATTATTGAGTTCTACTTGATTCTTAAAGTG---------TGT---ACTAATGTAAGTTCT---AGCTTA------------------------------------TTCTGGAAA---CTGCTTGTAGCATCTTTAGTTATGCTTGTTGCTGGTTTCATGGGAGAA---------ACT------------------GGA------GCT---------------------------------GCT------------------------------------------------------------------CCAGCT------------------AATTTAGCT---GGTATCGTAGGAGTACTTGCTTGGTTATATATCATTTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCTGCTGCT---CAA---AGT---GCC---TTT---GGA---ACAATT---AGATTAATTGTTACTGTG---------------------------------------------------------------GGTTGG---------GCAATTTATCCAATAGGTTATTGGGTAGGTGTCGGA---------------------------------------GCAAATGCT---GACATGGCAAACGCTAACTTAATTTATAACTATGCTGATTTTCTTAATAAAATCGCATTTGGTTTAGCTATTTATGTAGCTGCTGTTAGCGAC---TCAGAA--------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------MTGMSFWIVTAAMLAATVFFFVERDRVHG-KWKTSLSVAGLVTGVAFWHYMYMRGVWV----------DT-------GTSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-SL------------FWK-LLVASLVMLVAGFMGE---T------G--A-----------A----------------------PA------NLA-GIVGVLAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYPIGYWVGVG-------------ANA-DMANANLIYNYADFLNKIAFGLAIYVAAVSD-SE--------------------------------------- [IV-Gamma5-SAR86a]_DQ422255 [IV-Gamma5-SAR86a] clone_med-20m-a3_DQ422255 gi|90024030|gb|DQ422255| Uncultured bacterium clone med-20m-a3 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-a3 putative proteorhodopsin gene, partial cds. DQ422255 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATTACTGTGCCACTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTATGCACTAATGTAAGTTCTGGCCTATTCTGGAAACTACTTGGAGCATCATTAGTAATGCTTATCGCTGGTTTCATGGGAGAAACTGGAGCTGCTCCAGCAAATGCTGCTGGTATCGTAGGAGTAATTGCTTGGTTATATATCATCTATGAAGTATTTTCTGGTGAAGCTGGAAAACTAAATGCTTCAAGTGGTAATGCTGCTGCTCAAAGTGCTTTCGGTACAATTAGATTAATTGTTATTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIIEFYLILKVCTNVSSGLFWKLLGASLVMLIAGFMGETGAAPANAAGIVGVIAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVIVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTGCCACTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTA---------TGC---ACTAATGTAAGTTCT---GGCCTA------------------------------------TTCTGGAAA---CTACTTGGAGCATCATTAGTAATGCTTATCGCTGGTTTCATGGGAGAA---------ACT------------------GGA------GCT---------------------------------GCT------------------------------------------------------------------CCAGCA------------------AATGCTGCT---GGTATCGTAGGAGTAATTGCTTGGTTATATATCATCTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTAAATGCTTCA------AGT---GGTAATGCTGCTGCT---CAA---AGT---GCT---TTC---GGT---ACAATT---AGATTAATTGTTATTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWK-LLGASLVMLIAGFMGE---T------G--A-----------A----------------------PA------NAA-GIVGVIAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVIV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ422654 [IV-Gamma5-SAR86a] clone_med-tb04-20m-b8_DQ422654 gi|90024828|gb|DQ422654| Uncultured bacterium clone med-tb04-20m-b8 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-b8 putative proteorhodopsin gene, partial cds. DQ422654 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTGCCACTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTATGCACTAATGTAAGTTCTGGCCTATTCTGGAAACTACTTGGAGCATCATTAGTAATGCTTATCGCTGGTTTCATGGGAGAAACTGGAGCTGCTCCAGCAAATGCTGCTGGTATCGTAGGAGTAATTGCTTGGTTATATATCATCTATGAAGTATTTTCTGGTGAAGCTGGAAAACTAAATGCTTCAAGTGGTAATGCTGCTGCTCAAAGTGCTTTCGGTACAATTAGATTAATTGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIIEFYLILKVCTNVSSGLFWKLLGASLVMLIAGFMGETGAAPANAAGIVGVIAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTGCCACTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTA---------TGC---ACTAATGTAAGTTCT---GGCCTA------------------------------------TTCTGGAAA---CTACTTGGAGCATCATTAGTAATGCTTATCGCTGGTTTCATGGGAGAA---------ACT------------------GGA------GCT---------------------------------GCT------------------------------------------------------------------CCAGCA------------------AATGCTGCT---GGTATCGTAGGAGTAATTGCTTGGTTATATATCATCTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTAAATGCTTCA------AGT---GGTAATGCTGCTGCT---CAA---AGT---GCT---TTC---GGT---ACAATT---AGATTAATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWK-LLGASLVMLIAGFMGE---T------G--A-----------A----------------------PA------NAA-GIVGVIAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ422452 [IV-Gamma5-SAR86a] clone_med-tb04-50m-a2_DQ422452 gi|90024424|gb|DQ422452| Uncultured bacterium clone med-tb04-50m-a2 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-a2 putative proteorhodopsin gene, partial cds. DQ422452 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGGTACATAGACTGGCTAATTACTGTGCCACTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTATGCACTAATGTAAGTTCTGGCCTATTCTGGAAACTACTTGGAGCATCATTAGTAATGCTTATCGCTGGTTTCATGGGAGAAACTGGAGCTGCTCCAGCAAATGCTGCTGGTATCGTAGGAGTAATTGCTTGGTTATATATCATCTATGAAGTATTTTCTGGTGAAGCTGGAAAACTAAATGCTTCAAGTGGTAATGCTGCTGCTCAAAGTGCTTTCGGTACAATTAGATTAATTGTTACTGTAGGTTGGGCGATATATCCA RYIDWLITVPLQIIEFYLILKVCTNVSSGLFWKLLGASLVMLIAGFMGETGAAPANAAGIVGVIAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATAGACTGG------------------------CTAATTACTGTGCCACTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTA---------TGC---ACTAATGTAAGTTCT---GGCCTA------------------------------------TTCTGGAAA---CTACTTGGAGCATCATTAGTAATGCTTATCGCTGGTTTCATGGGAGAA---------ACT------------------GGA------GCT---------------------------------GCT------------------------------------------------------------------CCAGCA------------------AATGCTGCT---GGTATCGTAGGAGTAATTGCTTGGTTATATATCATCTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTAAATGCTTCA------AGT---GGTAATGCTGCTGCT---CAA---AGT---GCT---TTC---GGT---ACAATT---AGATTAATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCGATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWK-LLGASLVMLIAGFMGE---T------G--A-----------A----------------------PA------NAA-GIVGVIAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ203709 [IV-Gamma5-SAR86a] medHO155E9_env_samples_DQ203709 gi|77547866|gb|DQ203709| Uncultured bacterium clone medHO155E9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155E9 predicted proteorhodopsin gene, partial cds DQ203709 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTAATTACTGTGCCACTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTATGCACTAATGTAAGTTCTGGCCTATTCTGGAAACTACTTGGAGCATCATTAGTAATGCTTATCGCTGGTTTCATGGGAGAAACTGGAGCTGCTCCAGCAAATGCTGCTGGTATCGTAGGAGTAATTGCTTGGTTATATATCATCTATGAAGTATTTTCTGGTGAAGCTGGAAAACTAAATGCTTCAAGTGGTAATGCTGCTGCTCAAAGTGCTTTCGGTACAATTAGATTAATTGTTACTGTAGGTTGGGCCATTTATCCA RYIDWLITVPLQIIEFYLILKVCTNVSSGLFWKLLGASLVMLIAGFMGETGAAPANAAGIVGVIAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACTGTGCCACTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTA---------TGC---ACTAATGTAAGTTCT---GGCCTA------------------------------------TTCTGGAAA---CTACTTGGAGCATCATTAGTAATGCTTATCGCTGGTTTCATGGGAGAA---------ACT------------------GGA------GCT---------------------------------GCT------------------------------------------------------------------CCAGCA------------------AATGCTGCT---GGTATCGTAGGAGTAATTGCTTGGTTATATATCATCTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTAAATGCTTCA------AGT---GGTAATGCTGCTGCT---CAA---AGT---GCT---TTC---GGT---ACAATT---AGATTAATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWK-LLGASLVMLIAGFMGE---T------G--A-----------A----------------------PA------NAA-GIVGVIAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ422352 [IV-Gamma5-SAR86a] clone_50-8_DQ422352 gi|90024224|gb|DQ422352| Uncultured bacterium clone 50-8 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 50-8 putative proteorhodopsin gene, partial cds. DQ422352 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATTACTGTGCCACTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTATGCACTAATGTAAGTTCTGGCCTATTCTGGAAACTACTTGGAGCATCATTAGTAATGCTTATCGCTGGTTTCATGGGAGAAACTGGAGCTGCTCCAGCAAATGCTGCTGGTATCGTAGGAGTAATTGCTTGGTTATATATCATATATGAAGTATTTTCTGGTGAAGCTGGAAAACTAAATGCTTCAAGTGGTAATGCTGCTGCTCAAAGTGCTTTCGGTACAATTAGATTAATTGTTACTGTTGGTTGGGCGATTTATCCA RYIDWLITVPLQIIEFYLILKVCTNVSSGLFWKLLGASLVMLIAGFMGETGAAPANAAGIVGVIAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTGCCACTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTA---------TGC---ACTAATGTAAGTTCT---GGCCTA------------------------------------TTCTGGAAA---CTACTTGGAGCATCATTAGTAATGCTTATCGCTGGTTTCATGGGAGAA---------ACT------------------GGA------GCT---------------------------------GCT------------------------------------------------------------------CCAGCA------------------AATGCTGCT---GGTATCGTAGGAGTAATTGCTTGGTTATATATCATATATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTAAATGCTTCA------AGT---GGTAATGCTGCTGCT---CAA---AGT---GCT---TTC---GGT---ACAATT---AGATTAATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCGATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWK-LLGASLVMLIAGFMGE---T------G--A-----------A----------------------PA------NAA-GIVGVIAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ422398 [IV-Gamma5-SAR86a] clone_med-50m-d7_DQ422398 gi|90024316|gb|DQ422398| Uncultured bacterium clone med-50m-d7 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-d7 putative proteorhodopsin gene, partial cds. DQ422398 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATTACTGTGCCACTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTATGCACTAATGTAAGTTCTGGCCTATTCTGGAAACTACTTGGAGCATCATTAGTAATGCTTATCGCTGGTTTCATGGGAGAAACTGGAGCTGCTCCAGCAAATGCTGCTGGTATCGTAGGAGTAATTGCTTGGTTATATATCATATATGAAGTATTTTCTGGTGAAGCTGGAAAACTAAATGCTTCAAGTGGTAATGCTGCTGCTCAAAGTGCTTTCGGTACAATTAGATTAATTGTTACTGTTGGTTGGGCGATTTATCCA RYIDWLITVPLQIIEFYLILKVCTNVSSGLFWKLLGASLVMLIAGFMGETGAAPANAAGIVGVIAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTGCCACTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTA---------TGC---ACTAATGTAAGTTCT---GGCCTA------------------------------------TTCTGGAAA---CTACTTGGAGCATCATTAGTAATGCTTATCGCTGGTTTCATGGGAGAA---------ACT------------------GGA------GCT---------------------------------GCT------------------------------------------------------------------CCAGCA------------------AATGCTGCT---GGTATCGTAGGAGTAATTGCTTGGTTATATATCATATATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTAAATGCTTCA------AGT---GGTAATGCTGCTGCT---CAA---AGT---GCT---TTC---GGT---ACAATT---AGATTAATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCGATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWK-LLGASLVMLIAGFMGE---T------G--A-----------A----------------------PA------NAA-GIVGVIAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ422404 [IV-Gamma5-SAR86a] clone_med-50m-e12_DQ422404 gi|90024328|gb|DQ422404| Uncultured bacterium clone med-50m-e12 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-e12 putative proteorhodopsin gene, partial cds. DQ422404 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATTACTGTGCCACTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTATGCACTAATGTAAGTTCTGGCCTATTCTGGAAACTACTTGGAGCATCATTAGTAATGCTTATCGCTGGTTTCATGGGAGAAACTGGAGCTGCTCCAGCAAATGCTGCTGGTATCGTAGGAGTAATTGCTTGGTTATATATCATATATGAAGTATTTTCTGGTGAAGCTGGAAAACTAAATGCTTCAAGTGGTAATGCTGCTGCTCAAAGTGCTTTCGGTACAATTAGATTAATTGTTACTGTTGGTTGGGCGATATATCCA RYIDWLITVPLQIIEFYLILKVCTNVSSGLFWKLLGASLVMLIAGFMGETGAAPANAAGIVGVIAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTGCCACTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTA---------TGC---ACTAATGTAAGTTCT---GGCCTA------------------------------------TTCTGGAAA---CTACTTGGAGCATCATTAGTAATGCTTATCGCTGGTTTCATGGGAGAA---------ACT------------------GGA------GCT---------------------------------GCT------------------------------------------------------------------CCAGCA------------------AATGCTGCT---GGTATCGTAGGAGTAATTGCTTGGTTATATATCATATATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTAAATGCTTCA------AGT---GGTAATGCTGCTGCT---CAA---AGT---GCT---TTC---GGT---ACAATT---AGATTAATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCGATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWK-LLGASLVMLIAGFMGE---T------G--A-----------A----------------------PA------NAA-GIVGVIAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ422392 [IV-Gamma5-SAR86a] clone_med-50m-d12_DQ422392 gi|90024304|gb|DQ422392| Uncultured bacterium clone med-50m-d12 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-d12 putative proteorhodopsin gene, partial cds. DQ422392 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATTACTGTGCCACTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTATGCACTAATGTAAGTTCTGGCCTATTCTGGAAACTACTTGGAGCATCATTAGTAATGCTTATCGCTGGTTTCATGGGAGAAACTGGAGCTGCTCCAGCAAATGCTGCTGGTATCGTAGGAGTAATTGCTTGGTTATATATCATATATGAAGTATTTTCTGGTGAAGCTGGAAAACTAAATGCTTCAAGTGGTAATGCTGCTGCTCAAAGTGCTTTCGGTACAATTAGATTAATTGTTACTGTTGGTTGGGCTATTTATCCA RYIDWLITVPLQIIEFYLILKVCTNVSSGLFWKLLGASLVMLIAGFMGETGAAPANAAGIVGVIAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTGCCACTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTA---------TGC---ACTAATGTAAGTTCT---GGCCTA------------------------------------TTCTGGAAA---CTACTTGGAGCATCATTAGTAATGCTTATCGCTGGTTTCATGGGAGAA---------ACT------------------GGA------GCT---------------------------------GCT------------------------------------------------------------------CCAGCA------------------AATGCTGCT---GGTATCGTAGGAGTAATTGCTTGGTTATATATCATATATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTAAATGCTTCA------AGT---GGTAATGCTGCTGCT---CAA---AGT---GCT---TTC---GGT---ACAATT---AGATTAATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWK-LLGASLVMLIAGFMGE---T------G--A-----------A----------------------PA------NAA-GIVGVIAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ422400 [IV-Gamma5-SAR86a] clone_med-50m-d9_DQ422400 gi|90024320|gb|DQ422400| Uncultured bacterium clone med-50m-d9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-d9 putative proteorhodopsin gene, partial cds. DQ422400 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATTACTGTGCCACTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTATGCACTAATGTAAGTTCTGGCCTATTCTGGAAACTACTTGGAGCATCATTAGTAATGCTTATCGCTGGTTTCATGGGAGAAACTGGAGCTGCTCCAGCAAATGCTGCTGGTATCGTAGGAGTAATTGCTTGGTTATATATCATATATGAAGTATTTTCTGGTGAAGCTGGAAAACTAAATGCTTCAAGTGGTAATGCTGCTGCTCAAAGTGCTTTCGGTACAATTAGATTAATTGTTACTGTTGGTTGGGCTATTTATCCA RYIDWLITVPLQIIEFYLILKVCTNVSSGLFWKLLGASLVMLIAGFMGETGAAPANAAGIVGVIAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTGCCACTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTA---------TGC---ACTAATGTAAGTTCT---GGCCTA------------------------------------TTCTGGAAA---CTACTTGGAGCATCATTAGTAATGCTTATCGCTGGTTTCATGGGAGAA---------ACT------------------GGA------GCT---------------------------------GCT------------------------------------------------------------------CCAGCA------------------AATGCTGCT---GGTATCGTAGGAGTAATTGCTTGGTTATATATCATATATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTAAATGCTTCA------AGT---GGTAATGCTGCTGCT---CAA---AGT---GCT---TTC---GGT---ACAATT---AGATTAATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWK-LLGASLVMLIAGFMGE---T------G--A-----------A----------------------PA------NAA-GIVGVIAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ422413 [IV-Gamma5-SAR86a] clone_med-50m-f10_DQ422413 gi|90024346|gb|DQ422413| Uncultured bacterium clone med-50m-f10 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-f10 putative proteorhodopsin gene, partial cds. DQ422413 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATTACTGTGCCACTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTATGCACTAATGTAAGTTCTGGCCTATTCTGGAAACTACTTGGAGCATCATTAGTAATGCTTATCGCTGGTTTCATGGGAGAAACTGGAGCTGCTCCAGCAAATGCTGCTGGTATCGTAGGAGTAATTGCTTGGTTATATATCATATATGAAGTATTTTCTGGTGAAGCTGGAAAACTAAATGCTTCAAGTGGTAATGCTGCTGCTCAAAGTGCTTTCGGTACAATTAGATTAATTGTTACTGTTGGTTGGGCTATTTATCCA RYIDWLITVPLQIIEFYLILKVCTNVSSGLFWKLLGASLVMLIAGFMGETGAAPANAAGIVGVIAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTGCCACTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTA---------TGC---ACTAATGTAAGTTCT---GGCCTA------------------------------------TTCTGGAAA---CTACTTGGAGCATCATTAGTAATGCTTATCGCTGGTTTCATGGGAGAA---------ACT------------------GGA------GCT---------------------------------GCT------------------------------------------------------------------CCAGCA------------------AATGCTGCT---GGTATCGTAGGAGTAATTGCTTGGTTATATATCATATATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTAAATGCTTCA------AGT---GGTAATGCTGCTGCT---CAA---AGT---GCT---TTC---GGT---ACAATT---AGATTAATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWK-LLGASLVMLIAGFMGE---T------G--A-----------A----------------------PA------NAA-GIVGVIAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ422583 [IV-Gamma5-SAR86a] clone_med-tb04-0m-d6_DQ422583 gi|90024686|gb|DQ422583| Uncultured bacterium clone med-tb04-0m-d6 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-d6 putative proteorhodopsin gene, partial cds. DQ422583 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTGCCACTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTATGCACTAATGTAAGTTCTGGCCTATTCTGGAAACTACTTGGAGCATCATTAGTAATGCTTATCGCTGGTTTCATGGGAGAAACTGGAGCTGCTCCAGCAAATGCTGCTGGTATCGTAGGAGTAATTGCTTGGTTATATATCATATATGAAGTATTTTCTGGTGAAGCTGGAAAACTAAATGCTTCAAGTGGTAATGCTGCTGCTCAAAGTGCTTTCGGTACAATTAGATTAATTGTTACTGTTGGTTGGGCTATTTATCCA RYIDWLITVPLQIIEFYLILKVCTNVSSGLFWKLLGASLVMLIAGFMGETGAAPANAAGIVGVIAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTGCCACTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTA---------TGC---ACTAATGTAAGTTCT---GGCCTA------------------------------------TTCTGGAAA---CTACTTGGAGCATCATTAGTAATGCTTATCGCTGGTTTCATGGGAGAA---------ACT------------------GGA------GCT---------------------------------GCT------------------------------------------------------------------CCAGCA------------------AATGCTGCT---GGTATCGTAGGAGTAATTGCTTGGTTATATATCATATATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTAAATGCTTCA------AGT---GGTAATGCTGCTGCT---CAA---AGT---GCT---TTC---GGT---ACAATT---AGATTAATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWK-LLGASLVMLIAGFMGE---T------G--A-----------A----------------------PA------NAA-GIVGVIAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ422472 [IV-Gamma5-SAR86a] clone_med-tb04-50m-c11_DQ422472 gi|90024464|gb|DQ422472| Uncultured bacterium clone med-tb04-50m-c11 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-c11 putative proteorhodopsin gene, partial cds. DQ422472 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTGCCACTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTATGCACTAATGTAAGTTCTGGCCTATTCTGGAAACTACTTGGAGCATCATTAGTAATGCTTATCGCTGGTTTCATGGGAGAAACTGGAGCTGCTCCAGCAAATGCTGCTGGTATCGTAGGAGTAATTGCTTGGTTATATATCATATATGAAGTATTTTCTGGTGAAGCTGGAAAACTAAATGCTTCAAGTGGTAATGCTGCTGCTCAAAGTGCTTTCGGTACAATTAGATTAATTGTTACTGTTGGTTGGGCTATTTATCCA RYIDWLITVPLQIIEFYLILKVCTNVSSGLFWKLLGASLVMLIAGFMGETGAAPANAAGIVGVIAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTGCCACTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTA---------TGC---ACTAATGTAAGTTCT---GGCCTA------------------------------------TTCTGGAAA---CTACTTGGAGCATCATTAGTAATGCTTATCGCTGGTTTCATGGGAGAA---------ACT------------------GGA------GCT---------------------------------GCT------------------------------------------------------------------CCAGCA------------------AATGCTGCT---GGTATCGTAGGAGTAATTGCTTGGTTATATATCATATATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTAAATGCTTCA------AGT---GGTAATGCTGCTGCT---CAA---AGT---GCT---TTC---GGT---ACAATT---AGATTAATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWK-LLGASLVMLIAGFMGE---T------G--A-----------A----------------------PA------NAA-GIVGVIAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ422364 [IV-Gamma5-SAR86a] clone_med-50m-a9_DQ422364 gi|90024248|gb|DQ422364| Uncultured bacterium clone med-50m-a9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-a9 putative proteorhodopsin gene, partial cds. DQ422364 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na CGATACATTGACTGGCTAATTACTGTGCCACTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTATGCACTAATGTAAGTTCTGGCCTATTCTGGAAACTACTTGGAGCATCATTAGTAATGCTTATCGCTGGTTTCATGGGAGAAACTGGAGCTGCTCCAGCAAATGCTGCTGGTATCGTAGGAGTAATTGCTTGGTTATATATCATATATGAAGTATTTTCTGGTGAAGCTGGAAAACTAAATGCTTCAAGTGGTAATGCTGCTGCTCAAAGTGCTTTCGGTACAATTAGATTAATTGTTACTGTTGGTTGGGCTATTTATCCA RYIDWLITVPLQIIEFYLILKVCTNVSSGLFWKLLGASLVMLIAGFMGETGAAPANAAGIVGVIAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATTGACTGG------------------------CTAATTACTGTGCCACTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTA---------TGC---ACTAATGTAAGTTCT---GGCCTA------------------------------------TTCTGGAAA---CTACTTGGAGCATCATTAGTAATGCTTATCGCTGGTTTCATGGGAGAA---------ACT------------------GGA------GCT---------------------------------GCT------------------------------------------------------------------CCAGCA------------------AATGCTGCT---GGTATCGTAGGAGTAATTGCTTGGTTATATATCATATATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTAAATGCTTCA------AGT---GGTAATGCTGCTGCT---CAA---AGT---GCT---TTC---GGT---ACAATT---AGATTAATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWK-LLGASLVMLIAGFMGE---T------G--A-----------A----------------------PA------NAA-GIVGVIAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ339322 [IV-Gamma5-SAR86a] clone_S-S80M-G8_DQ339322 gi|85681617|gb|DQ339322| Uncultured bacterium clone S-S80M-G8 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-G8 predicted proteorhodopsin gene, partial cds. DQ339322 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTAATTACTGTGCCACTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTATGCACTAATGTAAGTTCTGGCCTATTCTGGAAACTACTTGGAGCATCATTAGTAATGCTTATCGCTGGTTTCATGGGAGAAACTGGAGCTGCTCCAGCAAATGCTGCTGGTATCGTAGGAGTAATTGCTTGGTTATATATCATATATGAAGTATTTTCTGGTGAAGCTGGAAAACTAAATGCTTCAAGTGGTAATGCTGCTGCTCAAAGTGCTTTCGGTACAATTAGATTAATTGTTACTGTTGGTTGGGCCATATATCCA RYIDWLITVPLQIIEFYLILKVCTNVSSGLFWKLLGASLVMLIAGFMGETGAAPANAAGIVGVIAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACTGTGCCACTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTA---------TGC---ACTAATGTAAGTTCT---GGCCTA------------------------------------TTCTGGAAA---CTACTTGGAGCATCATTAGTAATGCTTATCGCTGGTTTCATGGGAGAA---------ACT------------------GGA------GCT---------------------------------GCT------------------------------------------------------------------CCAGCA------------------AATGCTGCT---GGTATCGTAGGAGTAATTGCTTGGTTATATATCATATATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTAAATGCTTCA------AGT---GGTAATGCTGCTGCT---CAA---AGT---GCT---TTC---GGT---ACAATT---AGATTAATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWK-LLGASLVMLIAGFMGE---T------G--A-----------A----------------------PA------NAA-GIVGVIAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_EU915853 [IV-Gamma5-SAR86a] APF1111_env_samples_EU915853 gi|229358588|gb|EU915853| Uncultured microorganism clone APF1111 putative proteorhodopsin gene, partial cds Uncultured microorganism clone APF1111 putative proteorhodopsin gene, partial cds EU915853 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample_at_200_m_depth Atlantic Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTTGCCGCTACTGCGTTCTTCTTTGTTGAAAGAGATAGAGTTCACGGCAAATGGAAAACTTCATTATCAGTAGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTACATGTATATGAGAGGCGTTTGGGTTGATACTGAAACATCTCCAACTGTATACAGATATATTGACTGGCTAATTACAGTGCCACTTCAAATTATTGAGTTTTACTTGATACTTAAAGTCTGCACTAATGTAAGTTCTGGCCTATTCTGGAAGCTACTTGGAGCATCGTTAGTTATGCTTGTTGCTGGTTTCATGGGAGAAACTGGAGCTGCTCCAGCAAATGCCGCTGGTATCGTAGGAGTAATTGCTTGGTTATATATCATTTATGAAGTATTTTCTGGTGAAGCTGGAAAACTAAATGCTTCAAGTGGTAATGCTGCTGCTCAAAGTGCCTTCGGTACAATTAGATTAATTGTTACTGTTGGGTGGGCGATTTAC MLAATAFFFVERDRVHGKWKTSLSVAGLVTGVAFWHYMYMRGVWVDTETSPTVYRYIDWLITVPLQIIEFYLILKVCTNVSSGLFWKLLGASLVMLVAGFMGETGAAPANAAGIVGVIAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACTGCGTTCTTCTTTGTTGAAAGAGATAGAGTTCACGGC---AAATGGAAAACTTCATTATCAGTAGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTACATGTATATGAGAGGCGTTTGGGTT------------------------------GATACT---------------------GAAACATCTCCAACTGTATACAGATATATTGACTGG------------------------CTAATTACAGTGCCACTTCAAATTATTGAGTTTTACTTGATACTTAAAGTC---------TGC---ACTAATGTAAGTTCT---GGCCTA------------------------------------TTCTGGAAG---CTACTTGGAGCATCGTTAGTTATGCTTGTTGCTGGTTTCATGGGAGAA---------ACT------------------GGA------GCT---------------------------------GCT------------------------------------------------------------------CCAGCA------------------AATGCCGCT---GGTATCGTAGGAGTAATTGCTTGGTTATATATCATTTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTAAATGCTTCA------AGT---GGTAATGCTGCTGCT---CAA---AGT---GCC---TTC---GGT---ACAATT---AGATTAATTGTTACTGTT---------------------------------------------------------------GGGTGG---------GCGATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFVERDRVHG-KWKTSLSVAGLVTGVAFWHYMYMRGVWV----------DT-------ETSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWK-LLGASLVMLVAGFMGE---T------G--A-----------A----------------------PA------NAA-GIVGVIAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_EF088539 [IV-Gamma5-SAR86a] clone_APF1111_EF088539 gi|126843302|gb|EF088539| Uncultured bacterium clone APF1111 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone APF1111 putative proteorhodopsin gene, partial cds. EF088539 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na 200m water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGCTTGCCGCTACTGCGTTCTTCTTTGTTGAAAGAGATAGAGTTCACGGCAAATGGAAAACTTCATTATCAGTAGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTACATGTATATGAGAGGCGTTTGGGTTGATACTGAAACATCTCCAACTGTATACAGATATATTGACTGGCTAATTACAGTGCCACTTCAAATTATTGAGTTTTACTTGATACTTAAAGTCTGCACTAATGTAAGTTCTGGCCTATTCTGGAAGCTACTTGGAGCATCGTTAGTTATGCTTGTTGCTGGTTTCATGGGAGAAACTGGAGCTGCTCCAGCAAATGCCGCTGGTATCGTAGGAGTAATTGCTTGGTTATATATCATTTATGAAGTATTTTCTGGTGAAGCTGGAAAACTAAATGCTTCAAGTGGTAATGCTGCTGCTCAAAGTGCCTTCGGTACAATTAGATTAATTGTTACTGTTGGGTGGGCGATTTACCCA MLAATAFFFVERDRVHGKWKTSLSVAGLVTGVAFWHYMYMRGVWVDTETSPTVYRYIDWLITVPLQIIEFYLILKVCTNVSSGLFWKLLGASLVMLVAGFMGETGAAPANAAGIVGVIAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACTGCGTTCTTCTTTGTTGAAAGAGATAGAGTTCACGGC---AAATGGAAAACTTCATTATCAGTAGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTACATGTATATGAGAGGCGTTTGGGTT------------------------------GATACT---------------------GAAACATCTCCAACTGTATACAGATATATTGACTGG------------------------CTAATTACAGTGCCACTTCAAATTATTGAGTTTTACTTGATACTTAAAGTC---------TGC---ACTAATGTAAGTTCT---GGCCTA------------------------------------TTCTGGAAG---CTACTTGGAGCATCGTTAGTTATGCTTGTTGCTGGTTTCATGGGAGAA---------ACT------------------GGA------GCT---------------------------------GCT------------------------------------------------------------------CCAGCA------------------AATGCCGCT---GGTATCGTAGGAGTAATTGCTTGGTTATATATCATTTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTAAATGCTTCA------AGT---GGTAATGCTGCTGCT---CAA---AGT---GCC---TTC---GGT---ACAATT---AGATTAATTGTTACTGTT---------------------------------------------------------------GGGTGG---------GCGATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFVERDRVHG-KWKTSLSVAGLVTGVAFWHYMYMRGVWV----------DT-------ETSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWK-LLGASLVMLVAGFMGE---T------G--A-----------A----------------------PA------NAA-GIVGVIAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_1105101528716 [IV-Gamma5-SAR86a] JCVI_ORF_1105101528716 jcvi|1105101528716| 1105101528716 JCVI ORF 1105101528716 1105101528716 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.22_0.8 other #na 26-FEB-2003 Open_Ocean/5m_depth/S_36.6_psu/GS000d/Sargasso_Station_13/Sargasso_Sea Sargasso Sea marine 31.175 -64.32433 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf CTGTTTTCTTCTTTGTTGAAAGAGAATAGAGTTCACGGCAAATGGAAAACTTCATTATCAGTAGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTACATGTATATGAGAGGCGTTTGGGTTGATACTGGAACATCTCCAACTGTATACAGATATATTGACTGGCTAATTACAGTGCCACTTCAAATTATTGAGTTCTACTTGATACTTAAAGTCTGCACTAATGTAAGTTCTGGCCTTTTCTGGAAGCTACTAGGAGCATCATTAGTTATGCTTGTTGCTGGTTTCATGGGAGAAACTGGAGCTGCTCCAGCAAATGCTGCTGGTATCGTAGGAGTAATTGCTTGGTTATATATCATCTATGAAGTATTTTCTGGTGAAGCTGGAAAACTAAATGCTTCAAGTGGTAATGCTGCTGCTCAAAGTGCTTTCGGTACAATTAGATTAATTGTTACTGTTGGTTGGGCAATTTATCCAATAGGATATTGGGTAGGTGTCGGAGCTAATGCAGATATGGCTAACGCTAACTTAATTTATAACTATGCTGATTTTATTAACAAAATCGCATTTGGTTTAGCTATTTATGTAGCTGCTGTTAGCGACTCAGAA LFSSLLKENRVHGKWKTSLSVAGLVTGVAFWHYMYMRGVWVDTGTSPTVYRYIDWLITVPLQIIEFYLILKVCTNVSSGLFWKLLGASLVMLVAGFMGETGAAPANAAGIVGVIAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTVGWAIYPIGYWVGVGANADMANANLIYNYADFINKIAFGLAIYVAAVSDSE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTTTCTTCTTTGTTGAAAGAGAATAGAGTTCACGGC---AAATGGAAAACTTCATTATCAGTAGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTACATGTATATGAGAGGCGTTTGGGTT------------------------------GATACT---------------------GGAACATCTCCAACTGTATACAGATATATTGACTGG------------------------CTAATTACAGTGCCACTTCAAATTATTGAGTTCTACTTGATACTTAAAGTC---------TGC---ACTAATGTAAGTTCT---GGCCTT------------------------------------TTCTGGAAG---CTACTAGGAGCATCATTAGTTATGCTTGTTGCTGGTTTCATGGGAGAA---------ACT------------------GGA------GCT---------------------------------GCT------------------------------------------------------------------CCAGCA------------------AATGCTGCT---GGTATCGTAGGAGTAATTGCTTGGTTATATATCATCTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTAAATGCTTCA------AGT---GGTAATGCTGCTGCT---CAA---AGT---GCT---TTC---GGT---ACAATT---AGATTAATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCAATTTATCCAATAGGATATTGGGTAGGTGTCGGA---------------------------------------GCTAATGCA---GATATGGCTAACGCTAACTTAATTTATAACTATGCTGATTTTATTAACAAAATCGCATTTGGTTTAGCTATTTATGTAGCTGCTGTTAGCGAC---TCAGAA--------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------LFSSLLKENRVHG-KWKTSLSVAGLVTGVAFWHYMYMRGVWV----------DT-------GTSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWK-LLGASLVMLVAGFMGE---T------G--A-----------A----------------------PA------NAA-GIVGVIAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV---------------------GW---AIYPIGYWVGVG-------------ANA-DMANANLIYNYADFINKIAFGLAIYVAAVSD-SE--------------------------------------- [IV-Gamma5-SAR86a]_1105113958072 [IV-Gamma5-SAR86a] JCVI_ORF_1105113958072_GS000b_Open_Ocean_5m jcvi|1105113958072| 1105113958072 JCVI ORF 1105113958072 1105113958072 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.22_0.8 other #na 26-FEB-2003 Open_Ocean/5m_depth/S_36.7_psu/GS000b/Sargasso_Station_11/Sargasso_Sea Sargasso Sea marine 31.175 -64.32433 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf GTGGAAATCTCCTGCTTATCTTATAAGGAGTTATATATGAAATTTTTATTAACTTTAGCTGGCGTTGTTGCGCTACCTGCCTTTGCTGCAGATCTCAGCACAGGTGATATGACAGGAATGTCATTTTGGATTGTAACAGCTGCTATGCTTGCTGCTACTGTGTTCTTCTTTGTAGAAAGAGACAGAGTACACGGCAAATGGAAAACTTCATTATCAGTTGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCACTATCTATACATGAGAGGCGTTTGGGTTGAAACTGGAACATCTCCTACTGTATATAGATATATTGACTGGTTAATTACAGTACCACTTCAAATAATTGAGTTTTACTTAATTCTTAGAGTTTGTACTAATGTTGGTTCTGGTCTTTTCTGGAAATTACTTGGAGCATCATTAGTAATGCTTGTATGTGGTTTCATGGGAGAAACTGGAGTTGCAAGTGCAAATTTAATGGGTATTGTTGGAGTATTAGCTTGGTTGTACATTGTTTATGAGATATTCTCAGGTGAAGCTGGACAGCTTAATGCTTCTAGTGGCAATGCAGCCGCACAACAAGCTTTCAGTACAATTAGATTAATTGTTACTGTTGGTTGGGCTATCTATCCTATTGGATATTGGGTAGGTGTAGGAGCTAATGCTGACATGGGTAATGCTAACTTAATTTATAACTATGCTGATTTTATTAACAAAATCGCATTTGGTTTAGCTATTTATGTAGCTGCTGTTAGCGACTCAGAA VEISCLSYKELYMKFLLTLAGVVALPAFAADLSTGDMTGMSFWIVTAAMLAATVFFFVERDRVHGKWKTSLSVAGLVTGVAFWHYLYMRGVWVETGTSPTVYRYIDWLITVPLQIIEFYLILRVCTNVGSGLFWKLLGASLVMLVCGFMGETGVASANLMGIVGVLAWLYIVYEIFSGEAGQLNASSGNAAAQQAFSTIRLIVTVGWAIYPIGYWVGVGANADMGNANLIYNYADFINKIAFGLAIYVAAVSDSE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGGAAATCTCCTGCTTATCTTATAAGGAGTTATATATGAAATTTTTATTAACTTTAGCTGGCGTTGTTGCGCTACCTGCCTTTGCT---------GCAGATCTCAGCACAGGTGATATGACAGGAATGTCATTTTGGATTGTAACAGCTGCTATGCTTGCTGCTACTGTGTTCTTCTTTGTAGAAAGAGACAGAGTACACGGC---AAATGGAAAACTTCATTATCAGTTGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCACTATCTATACATGAGAGGCGTTTGGGTT------------------------------GAAACT---------------------GGAACATCTCCTACTGTATATAGATATATTGACTGG------------------------TTAATTACAGTACCACTTCAAATAATTGAGTTTTACTTAATTCTTAGAGTT---------TGT---ACTAATGTTGGTTCT---GGTCTT------------------------------------TTCTGGAAA---TTACTTGGAGCATCATTAGTAATGCTTGTATGTGGTTTCATGGGAGAA---------ACT------------------GGA------GTT---------------------------------GCA------------------------------------------------------------------AGTGCA------------------AATTTAATG---GGTATTGTTGGAGTATTAGCTTGGTTGTACATTGTTTATGAGATA---------------TTC------TCA---GGTGAAGCTGGACAGCTTAATGCTTCT------AGT---GGCAATGCAGCCGCA---CAA---CAA---GCT---TTC---AGT---ACAATT---AGATTAATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCTATCTATCCTATTGGATATTGGGTAGGTGTAGGA---------------------------------------GCTAATGCT---GACATGGGTAATGCTAACTTAATTTATAACTATGCTGATTTTATTAACAAAATCGCATTTGGTTTAGCTATTTATGTAGCTGCTGTTAGCGAC---TCAGAA--------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------VEISCLSYKELYMKFLLTLAGVVALPAFA---ADLSTGDMTGMSFWIVTAAMLAATVFFFVERDRVHG-KWKTSLSVAGLVTGVAFWHYLYMRGVWV----------ET-------GTSPTVYRYIDW--------LITVPLQIIEFYLILRV---C-TNVGS-GL------------FWK-LLGASLVMLVCGFMGE---T------G--V-----------A----------------------SA------NLM-GIVGVLAWLYIVYEI-----F--S-GEAGQLNAS--S-GNAAA-Q-Q-A-F-S-TI-RLIVTV---------------------GW---AIYPIGYWVGVG-------------ANA-DMGNANLIYNYADFINKIAFGLAIYVAAVSD-SE--------------------------------------- [IV-Gamma5-SAR86a]_1105133641588 [IV-Gamma5-SAR86a] JCVI_ORF_1105133641588_GS000b_Open_Ocean_5m jcvi|1105133641588| 1105133641588 JCVI ORF 1105133641588 1105133641588 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.22_0.8 other #na 26-FEB-2003 Open_Ocean/5m_depth/S_36.7_psu/GS000b/Sargasso_Station_11/Sargasso_Sea Sargasso Sea marine 31.175 -64.32433 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAACGGGGGGGTGAATTATTGCTCCACTACTTATATAAGGAGTTATATATGAAATTTTTATTAACATTGGCAGGCGTTGTTGCGCTTCCAGCTTTTGCTGCAGATCTGAGCACTAGCGATATGACAGGTGTGTCATTTTGGATTGTAACAGCCGCTATGCTTGCCGCTACTGTTTTCTTCTTTGTTGAGAGAGATAGAGTAAACGGTAAATGGAAAACTTCATTATCAGTTGCTGGTCTAGTTACTGGTGTGGCGTTTTGGCATTATCTATACATGAGAGGTGTTTGGGCCGATACAGGAACTTCACCAACTGTATATAGATATATAGACTGGTTAATCACAGTACCACTTCAAATTATTGAGTTCTATTTAATACTTAAAGTTTGTACAAATGTGACATCAAGCCTCTTTTGGAAACTACTTGTTGCATCATTAGTGATGCTTGTATTTGGTTTCATTGGAGAAACTGGTGGAATGGATGCAAATATTGCGGGTGTTCTTGCTCTGCTTGCTTGGTTCTACATTATCTATGAGATATTCGCGGGTGAAGCTGGTAAGCTCAATGCTGCTAGTGGAAATGCTGCGGCACAAAGTGCTTTCAGTACAATTAGACTGATTGTTACTTTTGGTTGGGCTATTTATCCTATAGGATATTGGTTAGGTGTTGGTGAAAATCCAGACATGGCTAATGCTAACTTAATCTATAACTATGCAGATTTTCTCAACAAAATTGCATTTTGGTTTAGCTATTTATGTAGCTGCCAG MKRGGELLLHYLYKELYMKFLLTLAGVVALPAFAADLSTSDMTGVSFWIVTAAMLAATVFFFVERDRVNGKWKTSLSVAGLVTGVAFWHYLYMRGVWADTGTSPTVYRYIDWLITVPLQIIEFYLILKVCTNVTSSLFWKLLVASLVMLVFGFIGETGGMDANIAGVLALLAWFYIIYEIFAGEAGKLNAASGNAAAQSAFSTIRLIVTFGWAIYPIGYWLGVGENPDMANANLIYNYADFLNKIAFWFSYLCSCQ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAACGGGGGGGTGAATTATTGCTCCACTACTTATATAAGGAGTTATATATGAAATTTTTATTAACATTGGCAGGCGTTGTTGCGCTTCCAGCTTTTGCT---------GCAGATCTGAGCACTAGCGATATGACAGGTGTGTCATTTTGGATTGTAACAGCCGCTATGCTTGCCGCTACTGTTTTCTTCTTTGTTGAGAGAGATAGAGTAAACGGT---AAATGGAAAACTTCATTATCAGTTGCTGGTCTAGTTACTGGTGTGGCGTTTTGGCATTATCTATACATGAGAGGTGTTTGGGCC------------------------------GATACA---------------------GGAACTTCACCAACTGTATATAGATATATAGACTGG------------------------TTAATCACAGTACCACTTCAAATTATTGAGTTCTATTTAATACTTAAAGTT---------TGT---ACAAATGTGACATCA---AGCCTC------------------------------------TTTTGGAAA---CTACTTGTTGCATCATTAGTGATGCTTGTATTTGGTTTCATTGGAGAA---------ACT------------------GGT------GGA---------------------------------ATG------------------------------------------------------------------GATGCA------------------AATATTGCG---GGTGTTCTTGCTCTGCTTGCTTGGTTCTACATTATCTATGAGATA---------------TTC------GCG---GGTGAAGCTGGTAAGCTCAATGCTGCT------AGT---GGAAATGCTGCGGCA---CAA---AGT---GCT---TTC---AGT---ACAATT---AGACTGATTGTTACTTTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCTATAGGATATTGGTTAGGTGTTGGT---------------------------------------GAAAATCCA---GACATGGCTAATGCTAACTTAATCTATAACTATGCAGATTTTCTCAACAAAATTGCATTTTGGTTTAGCTATTTATGTAGCTGCCAG------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------MKRGGELLLHYLYKELYMKFLLTLAGVVALPAFA---ADLSTSDMTGVSFWIVTAAMLAATVFFFVERDRVNG-KWKTSLSVAGLVTGVAFWHYLYMRGVWA----------DT-------GTSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVTS-SL------------FWK-LLVASLVMLVFGFIGE---T------G--G-----------M----------------------DA------NIA-GVLALLAWFYIIYEI-----F--A-GEAGKLNAA--S-GNAAA-Q-S-A-F-S-TI-RLIVTF---------------------GW---AIYPIGYWLGVG-------------ENP-DMANANLIYNYADFLNKIAFWFSYLCSCQ-------------------------------------------- [IV-Gamma5-SAR86a]_1105134597615 [IV-Gamma5-SAR86a] JCVI_ORF_1105134597615_GS001b_Open_Ocean_5m jcvi|1105134597615| 1105134597615 JCVI ORF 1105134597615 1105134597615 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.8_3.0 other #na 15-MAY-2003 Open_Ocean/5m_depth/S_36.7_psu/GS001b/Hydrostation_S/Sargasso_Sea Sargasso Sea marine 32.166668 -64.5 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf AAAATTTTATTAACATTGGTAGGGGTTGTTGCGCTTCCAGCTTTTGCTGCAGATCTGAGCACTAGCGATATGACAGGTGTGTCATTTTGGATTGTAACAGCCGCTATGCTTGCCGCTACTGTTTTCTTCTTTGTTGAGAGAGATAGAGTAAACGGTAAATGGAAAACTTCATTATCAGTTGCTGGTCTAGTTACTGGTGTGGCGTTTTGGCATTATCTATACATGAGAGGTGTTTGGGCCGATACAGGAACTTCACCAACTGTATATAGATATATAGACTGGTTAATCACAGTACCACTTCAAATTATTGAGTTCTATTTAATACTTAAAGTTTGTACAAATGTGACATCAAGCCTCTTTTGGAAACTACTTGTTGCATCATTAGTGATGCTTGTATTTGGTTTCATTGGAGAAACTGGTGGAATGGATGCAAATATTGCGGGTGTTCTTGCTCTGCTTGCTTGGTTCTACATTATCTATGAGATATTCGCGGGTGAAGCTGGTAAGCTCAATGCTGCTAGTGGAAATGCTGCGGCACAAAGTGCTTTCAGTACAATTAGACTGATTGTTACTTTTGGTTGGGCTATTTATCCTATAGGATATTGGTTAGGTGTTGGTGAAAATCCAGACATGGCTAATGCTAACTTAATCTATAACTATGCAGATTTTCTCAACAAAATTGCATTTGGTTTAGCTATTTATGTAGCTGCAGTTAGCGATTCAGAA KILLTLVGVVALPAFAADLSTSDMTGVSFWIVTAAMLAATVFFFVERDRVNGKWKTSLSVAGLVTGVAFWHYLYMRGVWADTGTSPTVYRYIDWLITVPLQIIEFYLILKVCTNVTSSLFWKLLVASLVMLVFGFIGETGGMDANIAGVLALLAWFYIIYEIFAGEAGKLNAASGNAAAQSAFSTIRLIVTFGWAIYPIGYWLGVGENPDMANANLIYNYADFLNKIAFGLAIYVAAVSDSE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAATTTTATTAACATTGGTAGGGGTTGTTGCGCTTCCAGCTTTTGCT---------GCAGATCTGAGCACTAGCGATATGACAGGTGTGTCATTTTGGATTGTAACAGCCGCTATGCTTGCCGCTACTGTTTTCTTCTTTGTTGAGAGAGATAGAGTAAACGGT---AAATGGAAAACTTCATTATCAGTTGCTGGTCTAGTTACTGGTGTGGCGTTTTGGCATTATCTATACATGAGAGGTGTTTGGGCC------------------------------GATACA---------------------GGAACTTCACCAACTGTATATAGATATATAGACTGG------------------------TTAATCACAGTACCACTTCAAATTATTGAGTTCTATTTAATACTTAAAGTT---------TGT---ACAAATGTGACATCA---AGCCTC------------------------------------TTTTGGAAA---CTACTTGTTGCATCATTAGTGATGCTTGTATTTGGTTTCATTGGAGAA---------ACT------------------GGT------GGA---------------------------------ATG------------------------------------------------------------------GATGCA------------------AATATTGCG---GGTGTTCTTGCTCTGCTTGCTTGGTTCTACATTATCTATGAGATA---------------TTC------GCG---GGTGAAGCTGGTAAGCTCAATGCTGCT------AGT---GGAAATGCTGCGGCA---CAA---AGT---GCT---TTC---AGT---ACAATT---AGACTGATTGTTACTTTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCTATAGGATATTGGTTAGGTGTTGGT---------------------------------------GAAAATCCA---GACATGGCTAATGCTAACTTAATCTATAACTATGCAGATTTTCTCAACAAAATTGCATTTGGTTTAGCTATTTATGTAGCTGCAGTTAGCGAT---TCAGAA--------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------KILLTLVGVVALPAFA---ADLSTSDMTGVSFWIVTAAMLAATVFFFVERDRVNG-KWKTSLSVAGLVTGVAFWHYLYMRGVWA----------DT-------GTSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVTS-SL------------FWK-LLVASLVMLVFGFIGE---T------G--G-----------M----------------------DA------NIA-GVLALLAWFYIIYEI-----F--A-GEAGKLNAA--S-GNAAA-Q-S-A-F-S-TI-RLIVTF---------------------GW---AIYPIGYWLGVG-------------ENP-DMANANLIYNYADFLNKIAFGLAIYVAAVSD-SE--------------------------------------- [IV-Gamma5-SAR86a]_DQ062255 [IV-Gamma5-SAR86a] MEDPR24M14_env_samples_DQ062255 gi|67483455|gb|DQ062255| Uncultured bacterium clone MEDPR24M14 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR24M14 proteorhodopsin gene, partial cds DQ062255 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na AGATACATAGACTGGCTAATCACAGTACCACTTCAAATTATTGAGTTCTATTTAATACTTAAAGTTTGTACAAATGTGACATCAAGCCTCTTTTGGAAACTACTTGTTGCATCATTAGTGATGCTTGTATTTGGTTTCATTGGAGAAACTGGTGGAATGGATGCAAATATTGCGGGTGTTCTTGCTCTGCTTGCTTGGTTCTACATTATCTATGAGATATTCGCGGGTGAAGCTGGTAAGCTCAATGCTGCTAGTGGAAATGCTGCGGCACAAAGTGCTTTCAGTACAATTAGACTGATTGTTACTTTTGGTTGGGCTATTTATCCA RYIDWLITVPLQIIEFYLILKVCTNVTSSLFWKLLVASLVMLVFGFIGETGGMDANIAGVLALLAWFYIIYEIFAGEAGKLNAASGNAAAQSAFSTIRLIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATCACAGTACCACTTCAAATTATTGAGTTCTATTTAATACTTAAAGTT---------TGT---ACAAATGTGACATCA---AGCCTC------------------------------------TTTTGGAAA---CTACTTGTTGCATCATTAGTGATGCTTGTATTTGGTTTCATTGGAGAA---------ACT------------------GGT------GGA---------------------------------ATG------------------------------------------------------------------GATGCA------------------AATATTGCG---GGTGTTCTTGCTCTGCTTGCTTGGTTCTACATTATCTATGAGATA---------------TTC------GCG---GGTGAAGCTGGTAAGCTCAATGCTGCT------AGT---GGAAATGCTGCGGCA---CAA---AGT---GCT---TTC---AGT---ACAATT---AGACTGATTGTTACTTTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILKV---C-TNVTS-SL------------FWK-LLVASLVMLVFGFIGE---T------G--G-----------M----------------------DA------NIA-GVLALLAWFYIIYEI-----F--A-GEAGKLNAA--S-GNAAA-Q-S-A-F-S-TI-RLIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_1105130889426 [IV-Gamma5-SAR86a] JCVI_ORF_1105130889426 jcvi|1105130889426| 1105130889426 JCVI ORF 1105130889426 1105130889426 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.22_0.8 other #na 26-FEB-2003 Open_Ocean/5m_depth/S_36.7_psu/GS000b/Sargasso_Station_11/Sargasso_Sea Sargasso Sea marine 31.175 -64.32433 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf GGGGTTGAAGACGCCGCTATGCTTGCTGCTACTGTTTTCTTCTTTGTTGAGAGAGATAGAGTTCACGGCAAATGGAAAACTTCATTATCAGTTGCTGGTCTAGTTACTGGTGTGGCGTTTTGGCATTATCTATACATGAGAGGTGTTTGGGCCGATACAGGAACTTCACCAACTGTTTATAGGTATATAGACTGGTTAATCACAGTACCGCTTCAAATTATTGAGTTCTACTTAATACTTAGAGTATGTACTAATGTGACATCAAGTCTTTTCTGGAAACTACTTGTAGCATCATTAGTAATGCTTGTTTTTGGTTTCATCGGAGAAACTGGTGGAATGGACGCAAATGTTGCAGGTGTTCTTGCTCTACTTGCTTGGTTCTACATTATCTATGAGATATTCATGGGTGAAGCTGGTAAGCTCAATGCTGCTAGTGGAAATGCTGCGGCCCAAAGTGCTTTCAGTACAATTAGACTGATTGTTACTTTTGGTTGGGCTATTTATCCTATCGGATATTGGTTAGGTGTTGGTAGTAATCCAGACATGGCTAATGCTAACTTAATTTATAACTATGCAGATTTTCTCAACAAAATTGCATTTGGTTTAGCTATTTATGTAGCTGCTGTTAGCGACTCAGAA GVEDAAMLAATVFFFVERDRVHGKWKTSLSVAGLVTGVAFWHYLYMRGVWADTGTSPTVYRYIDWLITVPLQIIEFYLILRVCTNVTSSLFWKLLVASLVMLVFGFIGETGGMDANVAGVLALLAWFYIIYEIFMGEAGKLNAASGNAAAQSAFSTIRLIVTFGWAIYPIGYWLGVGSNPDMANANLIYNYADFLNKIAFGLAIYVAAVSDSE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGGTTGAAGACGCCGCTATGCTTGCTGCTACTGTTTTCTTCTTTGTTGAGAGAGATAGAGTTCACGGC---AAATGGAAAACTTCATTATCAGTTGCTGGTCTAGTTACTGGTGTGGCGTTTTGGCATTATCTATACATGAGAGGTGTTTGGGCC------------------------------GATACA---------------------GGAACTTCACCAACTGTTTATAGGTATATAGACTGG------------------------TTAATCACAGTACCGCTTCAAATTATTGAGTTCTACTTAATACTTAGAGTA---------TGT---ACTAATGTGACATCA---AGTCTT------------------------------------TTCTGGAAA---CTACTTGTAGCATCATTAGTAATGCTTGTTTTTGGTTTCATCGGAGAA---------ACT------------------GGT------GGA---------------------------------ATG------------------------------------------------------------------GACGCA------------------AATGTTGCA---GGTGTTCTTGCTCTACTTGCTTGGTTCTACATTATCTATGAGATA---------------TTC------ATG---GGTGAAGCTGGTAAGCTCAATGCTGCT------AGT---GGAAATGCTGCGGCC---CAA---AGT---GCT---TTC---AGT---ACAATT---AGACTGATTGTTACTTTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCTATCGGATATTGGTTAGGTGTTGGT---------------------------------------AGTAATCCA---GACATGGCTAATGCTAACTTAATTTATAACTATGCAGATTTTCTCAACAAAATTGCATTTGGTTTAGCTATTTATGTAGCTGCTGTTAGCGAC---TCAGAA--------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------GVEDAAMLAATVFFFVERDRVHG-KWKTSLSVAGLVTGVAFWHYLYMRGVWA----------DT-------GTSPTVYRYIDW--------LITVPLQIIEFYLILRV---C-TNVTS-SL------------FWK-LLVASLVMLVFGFIGE---T------G--G-----------M----------------------DA------NVA-GVLALLAWFYIIYEI-----F--M-GEAGKLNAA--S-GNAAA-Q-S-A-F-S-TI-RLIVTF---------------------GW---AIYPIGYWLGVG-------------SNP-DMANANLIYNYADFLNKIAFGLAIYVAAVSD-SE--------------------------------------- [IV-Gamma5-SAR86a]_EU915746 [IV-Gamma5-SAR86a] PF75062_env_samples_EU915746 gi|229358374|gb|EU915746| Uncultured microorganism clone PF75062 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF75062 putative proteorhodopsin gene, partial cds EU915746 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na GTATTAGCGGCTACTGTATTCTTCTTTGTTGAAAGAGATAGAGTTCACGGTAAATGGAAAACTTCACTATCAGTCGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTATTTATATATGAGAGGTGTATGGGCCGACACAGGTACTTCTCCTACTGTATATAGATATATAGATTGGTTAATCACAGTACCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTATGTACAAATGTGACATCAAGCCTCTTCTGGAAACTACTTGTAGCATCACTAGTAATGCTAGTATTTGGTTTCATTGGAGAAACTGGCGGAATGAATGCAAACGTTGCAGGTGTTCTTGCTCTACTTGCTTGGTTCTACATAATCTATGAAATATTCATGGGTGAAGCTGGTAAGCTTAATGCTGCTAGTGGAAATGCTGCAGCTCAAAGTGCTTTCAGTACAATTAGATTGATTGTTACTTTTGGTTGGGCTATATAC VLAATVFFFVERDRVHGKWKTSLSVAGLVTGVAFWHYLYMRGVWADTGTSPTVYRYIDWLITVPLQIIEFYLILKVCTNVTSSLFWKLLVASLVMLVFGFIGETGGMNANVAGVLALLAWFYIIYEIFMGEAGKLNAASGNAAAQSAFSTIRLIVTFGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGGCTACTGTATTCTTCTTTGTTGAAAGAGATAGAGTTCACGGT---AAATGGAAAACTTCACTATCAGTCGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTATTTATATATGAGAGGTGTATGGGCC------------------------------GACACA---------------------GGTACTTCTCCTACTGTATATAGATATATAGATTGG------------------------TTAATCACAGTACCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTA---------TGT---ACAAATGTGACATCA---AGCCTC------------------------------------TTCTGGAAA---CTACTTGTAGCATCACTAGTAATGCTAGTATTTGGTTTCATTGGAGAA---------ACT------------------GGC------GGA---------------------------------ATG------------------------------------------------------------------AATGCA------------------AACGTTGCA---GGTGTTCTTGCTCTACTTGCTTGGTTCTACATAATCTATGAAATA---------------TTC------ATG---GGTGAAGCTGGTAAGCTTAATGCTGCT------AGT---GGAAATGCTGCAGCT---CAA---AGT---GCT---TTC---AGT---ACAATT---AGATTGATTGTTACTTTT---------------------------------------------------------------GGTTGG---------GCTATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------VLAATVFFFVERDRVHG-KWKTSLSVAGLVTGVAFWHYLYMRGVWA----------DT-------GTSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVTS-SL------------FWK-LLVASLVMLVFGFIGE---T------G--G-----------M----------------------NA------NVA-GVLALLAWFYIIYEI-----F--M-GEAGKLNAA--S-GNAAA-Q-S-A-F-S-TI-RLIVTF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ887778 [IV-Gamma5-SAR86a] clone_PF10002_DQ887778 gi|116294256|gb|DQ887778| Uncultured bacterium clone PF10002 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF10002 putative proteorhodopsin gene, partial cds. DQ887778 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2007 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na CTATTAGCGGCTACTGTATTCTTCTTTGTTGAAAGAGATAGAGTTCACGGTAAATGGAAAACTTCACTATCAGTCGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTATTTATATATGAGAGGTGTATGGGCCGACACAGGTACTTCTCCTACTGTATATAGATATATAGATTGGTTAATCACAGTACCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTATGTACAAATGTGACATCAAGCCTCTTCTGGAAACTACTTGTAGCATCACTAGTAATGCTAGTATTTGGTTTCATTGGAGAAACTGGCGGAATGAATGCAAACGTTGCAGGTGTTCTTGCTCTACTTGCTTGGTTCTACATAATCTATGAAATATTCATGGGTGAAGCTGGTAAGCTTAATGCTGCTAGTGGAAATGCTGCAGCTCAAAGTGCTTTCAGTACAATTAGATTGATTGTTACTTTTGGTTGGGCGATCTATCCA LLAATVFFFVERDRVHGKWKTSLSVAGLVTGVAFWHYLYMRGVWADTGTSPTVYRYIDWLITVPLQIIEFYLILKVCTNVTSSLFWKLLVASLVMLVFGFIGETGGMNANVAGVLALLAWFYIIYEIFMGEAGKLNAASGNAAAQSAFSTIRLIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTTGTTGAAAGAGATAGAGTTCACGGT---AAATGGAAAACTTCACTATCAGTCGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTATTTATATATGAGAGGTGTATGGGCC------------------------------GACACA---------------------GGTACTTCTCCTACTGTATATAGATATATAGATTGG------------------------TTAATCACAGTACCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTA---------TGT---ACAAATGTGACATCA---AGCCTC------------------------------------TTCTGGAAA---CTACTTGTAGCATCACTAGTAATGCTAGTATTTGGTTTCATTGGAGAA---------ACT------------------GGC------GGA---------------------------------ATG------------------------------------------------------------------AATGCA------------------AACGTTGCA---GGTGTTCTTGCTCTACTTGCTTGGTTCTACATAATCTATGAAATA---------------TTC------ATG---GGTGAAGCTGGTAAGCTTAATGCTGCT------AGT---GGAAATGCTGCAGCT---CAA---AGT---GCT---TTC---AGT---ACAATT---AGATTGATTGTTACTTTT---------------------------------------------------------------GGTTGG---------GCGATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFVERDRVHG-KWKTSLSVAGLVTGVAFWHYLYMRGVWA----------DT-------GTSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVTS-SL------------FWK-LLVASLVMLVFGFIGE---T------G--G-----------M----------------------NA------NVA-GVLALLAWFYIIYEI-----F--M-GEAGKLNAA--S-GNAAA-Q-S-A-F-S-TI-RLIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_EU915749 [IV-Gamma5-SAR86a] PF75077_env_samples_EU915749 gi|229358380|gb|EU915749| Uncultured microorganism clone PF75077 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF75077 putative proteorhodopsin gene, partial cds EU915749 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTCGCCGCTACTGTCTTCTTCTTTGTTGAAAGAGATAGAGTTCACGGTAAATGGGAAACTTCACTATCAGTCGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTATTTATATATGAGAGGTGTATGGGCCGACACAGGTACTTCTCCTACTGTATATAGATATATAGATTGGTTAATCACAGTACCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTATGTACAAATGTGACATCAAGCCTCTTCTGGAAACTACTTGTAGCATCATTAGTAATGCTAGTATTTGGTTTCATTGGAGAAACTGGCGGAATGAATGCAAACGTTGCAGGTGTTCTTGCTCTACTTGCTTGGTTCTACATAATCTATGAAATATTCATGGGTGAAGCTGGTAAGCTTAATGCTGCTAGTGGAAATGCTGCAGCTCAAAGTGCTTTCAGTACAATTAGATTGATTGTTACTTTTGGTTGGGCAATCTAC MLAATVFFFVERDRVHGKWETSLSVAGLVTGVAFWHYLYMRGVWADTGTSPTVYRYIDWLITVPLQIIEFYLILKVCTNVTSSLFWKLLVASLVMLVFGFIGETGGMNANVAGVLALLAWFYIIYEIFMGEAGKLNAASGNAAAQSAFSTIRLIVTFGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTCGCCGCTACTGTCTTCTTCTTTGTTGAAAGAGATAGAGTTCACGGT---AAATGGGAAACTTCACTATCAGTCGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTATTTATATATGAGAGGTGTATGGGCC------------------------------GACACA---------------------GGTACTTCTCCTACTGTATATAGATATATAGATTGG------------------------TTAATCACAGTACCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTA---------TGT---ACAAATGTGACATCA---AGCCTC------------------------------------TTCTGGAAA---CTACTTGTAGCATCATTAGTAATGCTAGTATTTGGTTTCATTGGAGAA---------ACT------------------GGC------GGA---------------------------------ATG------------------------------------------------------------------AATGCA------------------AACGTTGCA---GGTGTTCTTGCTCTACTTGCTTGGTTCTACATAATCTATGAAATA---------------TTC------ATG---GGTGAAGCTGGTAAGCTTAATGCTGCT------AGT---GGAAATGCTGCAGCT---CAA---AGT---GCT---TTC---AGT---ACAATT---AGATTGATTGTTACTTTT---------------------------------------------------------------GGTTGG---------GCAATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFVERDRVHG-KWETSLSVAGLVTGVAFWHYLYMRGVWA----------DT-------GTSPTVYRYIDW--------LITVPLQIIEFYLILKV---C-TNVTS-SL------------FWK-LLVASLVMLVFGFIGE---T------G--G-----------M----------------------NA------NVA-GVLALLAWFYIIYEI-----F--M-GEAGKLNAA--S-GNAAA-Q-S-A-F-S-TI-RLIVTF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ422206 [IV-Gamma5-SAR86a] clone_med-0m-e8_DQ422206 gi|90023932|gb|DQ422206| Uncultured bacterium clone med-0m-e8 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-e8 putative proteorhodopsin gene, partial cds. DQ422206 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATTACTGTGCCACTTCAAATAATTGAGTTTTACTTAATTCCTAAAGTATGTACAAATGTAAGTTCTGGTCTATTCTGGAAACTTTTAGGAGCATCTTTAGTTATGCTTATCTTTGGTTTCATGGGAGAGACTGGTTCAATGAATGCAAATATTGCAGGTATTATTGCTCTATTAGCATGGTTTTACATTATCTATGAGATTTTCATGGGTGGAGCTGGAAAACTAAATGCTTCTAGTGGTAATGCTGCTGCTCAAAGTGCCTTTAGTACAATTAGATTAATTGTTACTGTCGGTTGGGCTATTTATCCA RYIDWLITVPLQIIEFYLIPKVCTNVSSGLFWKLLGASLVMLIFGFMGETGSMNANIAGIIALLAWFYIIYEIFMGGAGKLNASSGNAAAQSAFSTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTGCCACTTCAAATAATTGAGTTTTACTTAATTCCTAAAGTA---------TGT---ACAAATGTAAGTTCT---GGTCTA------------------------------------TTCTGGAAA---CTTTTAGGAGCATCTTTAGTTATGCTTATCTTTGGTTTCATGGGAGAG---------ACT------------------GGT------TCA---------------------------------ATG------------------------------------------------------------------AATGCA------------------AATATTGCA---GGTATTATTGCTCTATTAGCATGGTTTTACATTATCTATGAGATT---------------TTC------ATG---GGTGGAGCTGGAAAACTAAATGCTTCT------AGT---GGTAATGCTGCTGCT---CAA---AGT---GCC---TTT---AGT---ACAATT---AGATTAATTGTTACTGTC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLIPKV---C-TNVSS-GL------------FWK-LLGASLVMLIFGFMGE---T------G--S-----------M----------------------NA------NIA-GIIALLAWFYIIYEI-----F--M-GGAGKLNAS--S-GNAAA-Q-S-A-F-S-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_KJ926132 [IV-Gamma5-SAR86a] BOUM_OTU045_env_samples gb|KJ926132| Uncultured bacterium clone BOUM OTU045 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU045 putative proteorhodopsin gene, partial cds KJ926132 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 33.709667 32.644667 #na #na #na #na #na GTTGACTGGCTAATTACCGTTCCACTTCAAATTATTGAGTTCTATTTGATCCTAAAGGTCTGTACTAATGTTGGTTCAGGCGTCTTCTGGAGACTATTAGGCGCATCACTTGTTATGCTAATAGCTGGATTTATGGGTGAAACAGGTTCTAATGCAATGATTTGTTTTGTAATTGGAATGGCGGCTTGGTTGTATATAATTTATGAGGTCTTCTCTGGAGAAGCAGGTAAGTTAAATGCATCAAGCGGTAACGTAGCTGCACAACAGGCATTTAGCACAATTCGTTTGATTGTGACTGTCGGATGGGCCATTTAC VDWLITVPLQIIEFYLILKVCTNVGSGVFWRLLGASLVMLIAGFMGETGSNAMICFVIGMAAWLYIIYEVFSGEAGKLNASSGNVAAQQAFSTIRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGACTGG------------------------CTAATTACCGTTCCACTTCAAATTATTGAGTTCTATTTGATCCTAAAGGTC---------TGT---ACTAATGTTGGTTCA---GGCGTC------------------------------------TTCTGGAGA---CTATTAGGCGCATCACTTGTTATGCTAATAGCTGGATTTATGGGTGAA---------ACA------------------GGT------TCT------------------------------------------------------------------------------------------------------AATGCA------------------ATGATTTGT---TTTGTAATTGGAATGGCGGCTTGGTTGTATATAATTTATGAGGTC---------------TTC------TCT---GGAGAAGCAGGTAAGTTAAATGCATCA------AGC---GGTAACGTAGCTGCA---CAA---CAG---GCA---TTT---AGC---ACAATT---CGTTTGATTGTGACTGTC---------------------------------------------------------------GGATGG---------GCCATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPLQIIEFYLILKV---C-TNVGS-GV------------FWR-LLGASLVMLIAGFMGE---T------G--S----------------------------------NA------MIC-FVIGMAAWLYIIYEV-----F--S-GEAGKLNAS--S-GNVAA-Q-Q-A-F-S-TI-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ203699 [IV-Gamma5-SAR86a] medHO155D6_env_samples_DQ203699 gi|77547846|gb|DQ203699| Uncultured bacterium clone medHO155D6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155D6 predicted proteorhodopsin gene, partial cds DQ203699 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATACATTGATTGGCTAATTACCGTTCCACTTCAAATTATTGAGTTCTATTTGATCCTAAAGGTCTGTACTAATGTTGGTTCAGGCGTTTTCTGGAGACTATTAGGCGCATCACTTGTTATGCTAATAGCTGGATTTATGGGTGAAACAGGTTCTAATGCAATGATTTGTTTTGTAATTGGAATGGCGGCTTGGTTGTATATAATTTATGAGGTCTTCTCTGGAGAAGCAGGTAAGTTAAATGCATCAAGCGGTAACGTAGCTGCACAACAGGCATTTAGCACAATTCGTTTGATTGTGACTGTCGGGTGGGCCATTTACCCA RYIDWLITVPLQIIEFYLILKVCTNVGSGVFWRLLGASLVMLIAGFMGETGSNAMICFVIGMAAWLYIIYEVFSGEAGKLNASSGNVAAQQAFSTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATTGATTGG------------------------CTAATTACCGTTCCACTTCAAATTATTGAGTTCTATTTGATCCTAAAGGTC---------TGT---ACTAATGTTGGTTCA---GGCGTT------------------------------------TTCTGGAGA---CTATTAGGCGCATCACTTGTTATGCTAATAGCTGGATTTATGGGTGAA---------ACA------------------GGT------TCT------------------------------------------------------------------------------------------------------AATGCA------------------ATGATTTGT---TTTGTAATTGGAATGGCGGCTTGGTTGTATATAATTTATGAGGTC---------------TTC------TCT---GGAGAAGCAGGTAAGTTAAATGCATCA------AGC---GGTAACGTAGCTGCA---CAA---CAG---GCA---TTT---AGC---ACAATT---CGTTTGATTGTGACTGTC---------------------------------------------------------------GGGTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILKV---C-TNVGS-GV------------FWR-LLGASLVMLIAGFMGE---T------G--S----------------------------------NA------MIC-FVIGMAAWLYIIYEV-----F--S-GEAGKLNAS--S-GNVAA-Q-Q-A-F-S-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ422319 [IV-Gamma5-SAR86a] clone_med-20m-f8_DQ422319 gi|90024158|gb|DQ422319| Uncultured bacterium clone med-20m-f8 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-f8 putative proteorhodopsin gene, partial cds. DQ422319 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATTACCGTTCCACTTCAAATTATTGAGTTCTATTTGATCCTAAAGGTCTGTACTAATGTTGGCTCAGGCGTTTTCTGGAGACTATTAGGCGCATCACTTGTTATGCTAATAGCTGGATTTATGGGTGAAACAGGTTCTAATGCAATGATTTGTTTTGTAATTGGAATGGCGGCTTGGTTGTATATAATTTATGAGGTCTTCTCTGGAGAAGCAGGTAAGTTAAATGCATCAAGCGGTAACGTAGCTGCACAACAGGCATTTAGCACAATTCGTTTGATTGTGACTGTCGGGTGGGCTATTTATCCA RYIDWLITVPLQIIEFYLILKVCTNVGSGVFWRLLGASLVMLIAGFMGETGSNAMICFVIGMAAWLYIIYEVFSGEAGKLNASSGNVAAQQAFSTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACCGTTCCACTTCAAATTATTGAGTTCTATTTGATCCTAAAGGTC---------TGT---ACTAATGTTGGCTCA---GGCGTT------------------------------------TTCTGGAGA---CTATTAGGCGCATCACTTGTTATGCTAATAGCTGGATTTATGGGTGAA---------ACA------------------GGT------TCT------------------------------------------------------------------------------------------------------AATGCA------------------ATGATTTGT---TTTGTAATTGGAATGGCGGCTTGGTTGTATATAATTTATGAGGTC---------------TTC------TCT---GGAGAAGCAGGTAAGTTAAATGCATCA------AGC---GGTAACGTAGCTGCA---CAA---CAG---GCA---TTT---AGC---ACAATT---CGTTTGATTGTGACTGTC---------------------------------------------------------------GGGTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILKV---C-TNVGS-GV------------FWR-LLGASLVMLIAGFMGE---T------G--S----------------------------------NA------MIC-FVIGMAAWLYIIYEV-----F--S-GEAGKLNAS--S-GNVAA-Q-Q-A-F-S-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ422542 [IV-Gamma5-SAR86a] clone_med-tb04-0m-a10_DQ422542 gi|90024604|gb|DQ422542| Uncultured bacterium clone med-tb04-0m-a10 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-a10 putative proteorhodopsin gene, partial cds. DQ422542 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACCGTTCCACTTCAAATAATCGAATTCTATTTAATTCTTAGAGTTTGTACAAATGTTGGTTCAGGTGTCTTCTGGAGACTATTGGGCGCTTCTCTTGTAATGCTGATAGCTGGCTTTATGGGTGAAACAGGTTCCAATGCAATGATTTGTTTTGTGATTGGAATGGCAGCTTGGTTATACATTATTTACGAGGTTTTCTCAGGAGAAGCTGGTAAGTTAAATGCATCAAGTGGAAATGCTGCTGCACAACAGGCATTTAGCACAATTCGTCTAATTGTTACTGTTGGTTGGGCTATTTATCCA RYIDWLITVPLQIIEFYLILRVCTNVGSGVFWRLLGASLVMLIAGFMGETGSNAMICFVIGMAAWLYIIYEVFSGEAGKLNASSGNAAAQQAFSTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACCGTTCCACTTCAAATAATCGAATTCTATTTAATTCTTAGAGTT---------TGT---ACAAATGTTGGTTCA---GGTGTC------------------------------------TTCTGGAGA---CTATTGGGCGCTTCTCTTGTAATGCTGATAGCTGGCTTTATGGGTGAA---------ACA------------------GGT------TCC------------------------------------------------------------------------------------------------------AATGCA------------------ATGATTTGT---TTTGTGATTGGAATGGCAGCTTGGTTATACATTATTTACGAGGTT---------------TTC------TCA---GGAGAAGCTGGTAAGTTAAATGCATCA------AGT---GGAAATGCTGCTGCA---CAA---CAG---GCA---TTT---AGC---ACAATT---CGTCTAATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILRV---C-TNVGS-GV------------FWR-LLGASLVMLIAGFMGE---T------G--S----------------------------------NA------MIC-FVIGMAAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-Q-A-F-S-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ927001 [IV-Gamma5-SAR86a] clone_PF91128_DQ927001 gi|116294117|gb|DQ927001| Uncultured bacterium clone PF91128 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF91128 putative proteorhodopsin gene, partial cds. DQ927001 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGGTTGCCGCTACTGTATTCTTCTTTGCAGAAAGAGATCAAGTAAAAGGTAAATGGAAGACATCTTTATCAGTAGCTGGTTTAGTTACTGGTGTTGCATTCTGGCACTATCTCTATATGAGAGGTGTTTGGGTAGATACTGGGGCATCACCAACTGTATATAGATATATAGACTGGTTAATCACAGTACCTCTTCAAATAATTGAGTTCTATTTGATTTTAAGAGTTTGTACAAATGTATCTTCTGGTCTTTTCTGGAGACTGTTAGTTGCATCCCTAGTTATGCTCATTGCAGGATTCATGGGAGAAACTGGATCAAACGCAATGATTTGCTTTGTTATTGGAATGGCTGGATGGTTATACATCATCTATGAAGTCTTCACTGGTGAAGCTGGCAAGCTAAATGCATCTAGTGGCAACGCAGCTGCTCAGCAAGCTTTCAGCACAATCAGACTTATTGTAACTGTTGGTTGGGCGATTTATCCA MVAATVFFFAERDQVKGKWKTSLSVAGLVTGVAFWHYLYMRGVWVDTGASPTVYRYIDWLITVPLQIIEFYLILRVCTNVSSGLFWRLLVASLVMLIAGFMGETGSNAMICFVIGMAGWLYIIYEVFTGEAGKLNASSGNAAAQQAFSTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTATTCTTCTTTGCAGAAAGAGATCAAGTAAAAGGT---AAATGGAAGACATCTTTATCAGTAGCTGGTTTAGTTACTGGTGTTGCATTCTGGCACTATCTCTATATGAGAGGTGTTTGGGTA------------------------------GATACT---------------------GGGGCATCACCAACTGTATATAGATATATAGACTGG------------------------TTAATCACAGTACCTCTTCAAATAATTGAGTTCTATTTGATTTTAAGAGTT---------TGT---ACAAATGTATCTTCT---GGTCTT------------------------------------TTCTGGAGA---CTGTTAGTTGCATCCCTAGTTATGCTCATTGCAGGATTCATGGGAGAA---------ACT------------------GGA------TCA------------------------------------------------------------------------------------------------------AACGCA------------------ATGATTTGC---TTTGTTATTGGAATGGCTGGATGGTTATACATCATCTATGAAGTC---------------TTC------ACT---GGTGAAGCTGGCAAGCTAAATGCATCT------AGT---GGCAACGCAGCTGCT---CAG---CAA---GCT---TTC---AGC---ACAATC---AGACTTATTGTAACTGTT---------------------------------------------------------------GGTTGG---------GCGATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFAERDQVKG-KWKTSLSVAGLVTGVAFWHYLYMRGVWV----------DT-------GASPTVYRYIDW--------LITVPLQIIEFYLILRV---C-TNVSS-GL------------FWR-LLVASLVMLIAGFMGE---T------G--S----------------------------------NA------MIC-FVIGMAGWLYIIYEV-----F--T-GEAGKLNAS--S-GNAAA-Q-Q-A-F-S-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_DQ927004 [IV-Gamma5-SAR86a] clone_PF91131_DQ927004 gi|116294123|gb|DQ927004| Uncultured bacterium clone PF91131 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF91131 putative proteorhodopsin gene, partial cds. DQ927004 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGGTCGCCGCTACTGCTTTCTTCTTTGCAGAAAGAGATCAAGTAAAAGGTAAATGGAAAACATCTTTATCAGTAGCTGGTTTGGTTACTGGTGTTGCATTCTGGCACTATCTCTATATGAGAGGTGTTTGGGTAGACACTGGTGCATCGCCAACTGTATACAGATATATAGATTGGTTAATCACAGTACCTCTTCAAATAATTGAGTTCTATTTGATTCTAAGAGTCTGTACAAATGTATCTTCTGGTCTTTTCTGGAGATTATTAGTTGCATCCTTAGTCATGCTTATTGCAGGATTCATGGGAGAAACTGGATCAAATGAGTTGATTTGCTTTGTTGTTGGAATGGCTGGATGGTTATACATCATCTATGAAGTCTTTACTGGTGAAGCAGGCAAGCTGAATGCATCTAGTGGCAACGCAGCTGCTCAACAAGCTTTCAGTACAATCAGACTTATTGTAACTGTTGGTTGGGCAATATATCCA MVAATAFFFAERDQVKGKWKTSLSVAGLVTGVAFWHYLYMRGVWVDTGASPTVYRYIDWLITVPLQIIEFYLILRVCTNVSSGLFWRLLVASLVMLIAGFMGETGSNELICFVVGMAGWLYIIYEVFTGEAGKLNASSGNAAAQQAFSTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCCGCTACTGCTTTCTTCTTTGCAGAAAGAGATCAAGTAAAAGGT---AAATGGAAAACATCTTTATCAGTAGCTGGTTTGGTTACTGGTGTTGCATTCTGGCACTATCTCTATATGAGAGGTGTTTGGGTA------------------------------GACACT---------------------GGTGCATCGCCAACTGTATACAGATATATAGATTGG------------------------TTAATCACAGTACCTCTTCAAATAATTGAGTTCTATTTGATTCTAAGAGTC---------TGT---ACAAATGTATCTTCT---GGTCTT------------------------------------TTCTGGAGA---TTATTAGTTGCATCCTTAGTCATGCTTATTGCAGGATTCATGGGAGAA---------ACT------------------GGA------TCA------------------------------------------------------------------------------------------------------AATGAG------------------TTGATTTGC---TTTGTTGTTGGAATGGCTGGATGGTTATACATCATCTATGAAGTC---------------TTT------ACT---GGTGAAGCAGGCAAGCTGAATGCATCT------AGT---GGCAACGCAGCTGCT---CAA---CAA---GCT---TTC---AGT---ACAATC---AGACTTATTGTAACTGTT---------------------------------------------------------------GGTTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFAERDQVKG-KWKTSLSVAGLVTGVAFWHYLYMRGVWV----------DT-------GASPTVYRYIDW--------LITVPLQIIEFYLILRV---C-TNVSS-GL------------FWR-LLVASLVMLIAGFMGE---T------G--S----------------------------------NE------LIC-FVVGMAGWLYIIYEV-----F--T-GEAGKLNAS--S-GNAAA-Q-Q-A-F-S-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_1105106484136 [IV-Gamma5-SAR86a] JCVI_ORF_1105106484136_GS000c_Open_Ocean_5m jcvi|1105106484136| 1105106484136 JCVI ORF 1105106484136 1105106484136 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.22_0.8 other #na 25-FEB-2003 Open_Ocean/5m_depth/S_36.7_psu/GS000c/Sargasso_Stations_3/Sargasso_Sea Sargasso Sea marine 32.174835 -64.01017 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf GTGCATATGAAATATTTACTAGTTCTAGTCTCATTTGTCAGTATGCCGACCTATGCAGCTGATTTAAGTACGGACGATATCACTGGAATCTCATTTTGGCTTGTAACTGCAGCAATGCTAGCTGCTACAGTTTTCTTTTTTGTTGAAAGAGATAACGTTCAAGGCAAATGGAAAACATCATTGTCTGTTGCTGGTCTCGTAACAGGAATAGCCTTCTGGCATTACCTCTATATGAGAGGAGTATGGGTAGACACTCAGGGTTCACCAACAGTATTCAGATACATTGATTGGTTAATTACAGTTCCGCTGCAAATTATAGAATTTTATTTAATCTTGAGGGTATGCACGAATGTTGGCAGCAATGTTTTTTGGAAATTACTTGTCTATTCACTCGTAATGTTGATTGCTGGCTTCCTTGGTGAAACAGGCTCCAATGCTTTGATATGCTTCATTATCGGAATGGCTGGATGGTTGTTAATTATCTACGAAGTCTTTTTTGGTGAGGCAGGAAAGCTCAATGCTGGAAGTGGTAATGCCGCTGCACAATCTGCTTTTAATACCATTAGATGGATTGTCACGGTTGGATGGGCCATCTATCCAGTTGGCTATATGCTTGGAATGGGTGACGCGCCAGATATGGCCAATTCAAACCTGATTTATAACCTTGCTGATTTTATTAATAAAATCGCCTTTGGGTTAGCAATCTATGTAGCTGCGATAAGCGATAACGAT VHMKYLLVLVSFVSMPTYAADLSTDDITGISFWLVTAAMLAATVFFFVERDNVQGKWKTSLSVAGLVTGIAFWHYLYMRGVWVDTQGSPTVFRYIDWLITVPLQIIEFYLILRVCTNVGSNVFWKLLVYSLVMLIAGFLGETGSNALICFIIGMAGWLLIIYEVFFGEAGKLNAGSGNAAAQSAFNTIRWIVTVGWAIYPVGYMLGMGDAPDMANSNLIYNLADFINKIAFGLAIYVAAISDND ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGCATATGAAATATTTACTAGTTCTAGTCTCATTTGTCAGTATGCCGACCTATGCA---------GCTGATTTAAGTACGGACGATATCACTGGAATCTCATTTTGGCTTGTAACTGCAGCAATGCTAGCTGCTACAGTTTTCTTTTTTGTTGAAAGAGATAACGTTCAAGGC---AAATGGAAAACATCATTGTCTGTTGCTGGTCTCGTAACAGGAATAGCCTTCTGGCATTACCTCTATATGAGAGGAGTATGGGTA------------------------------GACACT---------------------CAGGGTTCACCAACAGTATTCAGATACATTGATTGG------------------------TTAATTACAGTTCCGCTGCAAATTATAGAATTTTATTTAATCTTGAGGGTA---------TGC---ACGAATGTTGGCAGC---AATGTT------------------------------------TTTTGGAAA---TTACTTGTCTATTCACTCGTAATGTTGATTGCTGGCTTCCTTGGTGAA---------ACA------------------GGC------TCC------------------------------------------------------------------------------------------------------AATGCT------------------TTGATATGC---TTCATTATCGGAATGGCTGGATGGTTGTTAATTATCTACGAAGTC---------------TTT------TTT---GGTGAGGCAGGAAAGCTCAATGCTGGA------AGT---GGTAATGCCGCTGCA---CAA---TCT---GCT---TTT---AAT---ACCATT---AGATGGATTGTCACGGTT---------------------------------------------------------------GGATGG---------GCCATCTATCCAGTTGGCTATATGCTTGGAATGGGT---------------------------------------GACGCGCCA---GATATGGCCAATTCAAACCTGATTTATAACCTTGCTGATTTTATTAATAAAATCGCCTTTGGGTTAGCAATCTATGTAGCTGCGATAAGCGAT---AACGAT--------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------VHMKYLLVLVSFVSMPTYA---ADLSTDDITGISFWLVTAAMLAATVFFFVERDNVQG-KWKTSLSVAGLVTGIAFWHYLYMRGVWV----------DT-------QGSPTVFRYIDW--------LITVPLQIIEFYLILRV---C-TNVGS-NV------------FWK-LLVYSLVMLIAGFLGE---T------G--S----------------------------------NA------LIC-FIIGMAGWLLIIYEV-----F--F-GEAGKLNAG--S-GNAAA-Q-S-A-F-N-TI-RWIVTV---------------------GW---AIYPVGYMLGMG-------------DAP-DMANSNLIYNLADFINKIAFGLAIYVAAISD-ND--------------------------------------- [IV-Gamma5-SAR86a]_1105090524576 [IV-Gamma5-SAR86a] JCVI_ORF_1105090524576_GS035_Coastal_2m jcvi|1105090524576| 1105090524576 JCVI ORF 1105090524576 1105090524576 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 01-mars-04 Coastal/2m_depth/S_34.5_psu/GS035/Wolf_Island/Galapagos_Islands Pacific Ocean marine 1.3891667 -91.81695 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAATATTTATTGACTCTCGTTGGTTTGATAAGCATGCCATCATTTGCTTCAACAGGTGATCTTCAAACTAGTGATTTGACGGGTATTTCCTTTTGGCTTGTAACTGCAGCTATGCTTGCAGCTACTGTATTCTTTTTCGCAGAAAGAGATAATGTCGAAGGTAAGTGGAAAACATCTTTATCAGTAGCAGGTTTAGTTACTGGTGTTGCATTCTGGCACTATCTCTATATGAGAGGTGTTTGGGTGGATACTGGAACATCGCCTACTGTATACAGATATATTGACTGGTTAATTACAGTTCCGCTTCAAGTAATTGAATTCTATTTAATTCTTAGAGTGTGTACTAATGTTTCTTCAGGTTTATTCTGGAAACTATTAGGTGCTTCTGTAGTTATGCTAGTTGCTGGTTTCATGGGTGAAACAGGCTCTAATGCAATGATTTGCTTTGTTGTAGGAATGGCGGCTTGGTTATACATCATATATGAAGTCTTTACAGGAGAAGCTGGAAAGTTAAATGCTTCTAGCGGCAATGCTGCTGCACAACAAGCATTCAGCACAATCAGACTAATTGTGACCGTTGGTTGGGCGATATATCCTATTGGATATTTCCTCGGAATGGGAGCTAATCCTGATATGGCTAATGCTAACCTTATCTATAACCTTGCAGATTTTATTAACAAAATCGCATTTGGTTTAGCTATTTGGGCTGCTGCAGTTAGCGACAAAGAG MKYLLTLVGLISMPSFASTGDLQTSDLTGISFWLVTAAMLAATVFFFAERDNVEGKWKTSLSVAGLVTGVAFWHYLYMRGVWVDTGTSPTVYRYIDWLITVPLQVIEFYLILRVCTNVSSGLFWKLLGASVVMLVAGFMGETGSNAMICFVVGMAAWLYIIYEVFTGEAGKLNASSGNAAAQQAFSTIRLIVTVGWAIYPIGYFLGMGANPDMANANLIYNLADFINKIAFGLAIWAAAVSDKE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAATATTTATTGACTCTCGTTGGTTTGATAAGCATGCCATCATTTGCT---TCAACAGGTGATCTTCAAACTAGTGATTTGACGGGTATTTCCTTTTGGCTTGTAACTGCAGCTATGCTTGCAGCTACTGTATTCTTTTTCGCAGAAAGAGATAATGTCGAAGGT---AAGTGGAAAACATCTTTATCAGTAGCAGGTTTAGTTACTGGTGTTGCATTCTGGCACTATCTCTATATGAGAGGTGTTTGGGTG------------------------------GATACT---------------------GGAACATCGCCTACTGTATACAGATATATTGACTGG------------------------TTAATTACAGTTCCGCTTCAAGTAATTGAATTCTATTTAATTCTTAGAGTG---------TGT---ACTAATGTTTCTTCA---GGTTTA------------------------------------TTCTGGAAA---CTATTAGGTGCTTCTGTAGTTATGCTAGTTGCTGGTTTCATGGGTGAA---------ACA------------------GGC------TCT------------------------------------------------------------------------------------------------------AATGCA------------------ATGATTTGC---TTTGTTGTAGGAATGGCGGCTTGGTTATACATCATATATGAAGTC---------------TTT------ACA---GGAGAAGCTGGAAAGTTAAATGCTTCT------AGC---GGCAATGCTGCTGCA---CAA---CAA---GCA---TTC---AGC---ACAATC---AGACTAATTGTGACCGTT---------------------------------------------------------------GGTTGG---------GCGATATATCCTATTGGATATTTCCTCGGAATGGGA---------------------------------------GCTAATCCT---GATATGGCTAATGCTAACCTTATCTATAACCTTGCAGATTTTATTAACAAAATCGCATTTGGTTTAGCTATTTGGGCTGCTGCAGTTAGCGAC---AAAGAG--------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------MKYLLTLVGLISMPSFA-STGDLQTSDLTGISFWLVTAAMLAATVFFFAERDNVEG-KWKTSLSVAGLVTGVAFWHYLYMRGVWV----------DT-------GTSPTVYRYIDW--------LITVPLQVIEFYLILRV---C-TNVSS-GL------------FWK-LLGASVVMLVAGFMGE---T------G--S----------------------------------NA------MIC-FVVGMAAWLYIIYEV-----F--T-GEAGKLNAS--S-GNAAA-Q-Q-A-F-S-TI-RLIVTV---------------------GW---AIYPIGYFLGMG-------------ANP-DMANANLIYNLADFINKIAFGLAIWAAAVSD-KE--------------------------------------- [IV-Gamma5-SAR86a]_EF079858 [IV-Gamma5-SAR86a] clone_ID11057_EF079858 gi|126361805|gb|EF079858| Uncultured bacterium clone ID11057 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID11057 putative proteorhodopsin gene, partial cds. EF079858 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na #na Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGGTTGCCGCTACTGTTTTCTTCTTCGCAGGAAGAGATAATGTCGAAGGTAAGTGGAAAACATCTTTATCAGTAGCAGGTTTAGTTACTGGTGTTGCATTCTGGCACTATCTCTATATGAGAGGTGTTTGGGTGGATACTGGAACATCGCCTACTGTATACAGATATATCGACTGGTTAATTACAGTTCCGCTTCAAGTAATTGAATTCTATTTAATTCTTAGAGTGTGTACCAATGTTTCTTCAGGTTTATTCTGGAAACTATTAGGTGCTTCTGTAGTTATGCTAGTTGCTGGTTTCATGGGTGAAACAGGCTCTAATGCAATGATTTGCTTTGTTGTAGGAATGGCGGCTTGGTTATACATCATATATGAAGTCTTTACAGGAGAAGCTGGAAAGTTAAATGCTTCTAGCGGCAATGCTGCTGCACAACAAGCATTCAGCACAATCAGACTAATTGTGACCGTTGGTTGGGCGATTTACCCA MVAATVFFFAGRDNVEGKWKTSLSVAGLVTGVAFWHYLYMRGVWVDTGTSPTVYRYIDWLITVPLQVIEFYLILRVCTNVSSGLFWKLLGASVVMLVAGFMGETGSNAMICFVVGMAAWLYIIYEVFTGEAGKLNASSGNAAAQQAFSTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTTTTCTTCTTCGCAGGAAGAGATAATGTCGAAGGT---AAGTGGAAAACATCTTTATCAGTAGCAGGTTTAGTTACTGGTGTTGCATTCTGGCACTATCTCTATATGAGAGGTGTTTGGGTG------------------------------GATACT---------------------GGAACATCGCCTACTGTATACAGATATATCGACTGG------------------------TTAATTACAGTTCCGCTTCAAGTAATTGAATTCTATTTAATTCTTAGAGTG---------TGT---ACCAATGTTTCTTCA---GGTTTA------------------------------------TTCTGGAAA---CTATTAGGTGCTTCTGTAGTTATGCTAGTTGCTGGTTTCATGGGTGAA---------ACA------------------GGC------TCT------------------------------------------------------------------------------------------------------AATGCA------------------ATGATTTGC---TTTGTTGTAGGAATGGCGGCTTGGTTATACATCATATATGAAGTC---------------TTT------ACA---GGAGAAGCTGGAAAGTTAAATGCTTCT------AGC---GGCAATGCTGCTGCA---CAA---CAA---GCA---TTC---AGC---ACAATC---AGACTAATTGTGACCGTT---------------------------------------------------------------GGTTGG---------GCGATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFAGRDNVEG-KWKTSLSVAGLVTGVAFWHYLYMRGVWV----------DT-------GTSPTVYRYIDW--------LITVPLQVIEFYLILRV---C-TNVSS-GL------------FWK-LLGASVVMLVAGFMGE---T------G--S----------------------------------NA------MIC-FVVGMAAWLYIIYEV-----F--T-GEAGKLNAS--S-GNAAA-Q-Q-A-F-S-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_1105152513894 [IV-Gamma5-SAR86a] JCVI_ORF_1105152513894 jcvi|1105152513894| 1105152513894 JCVI ORF 1105152513894 1105152513894 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 10-FEB-2004 Coastal_upwelling/12m_depth/S_n.a/GS031/Upwelling/Fernandina_Island/Galapagos_Islands Pacific Ocean marine -0.3011111 -91.651665 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAATATTTATTGACTCTCATTGGTTTGATAAGCATGCCTTCATTTGCTGAATCAGCAGGTGATCTTCAAACCAGTGATTTAACAGGTATTTCCTTTTGGCTTGTGACTGCAGCTATGCTTGCAGCTACTGTATTCTTTTTCGCAGAAAGAGATAACGTCGAAGGTAAATGGAAAACATCTTTATCAGTAGCAGGTTTAGTTACTGGTGTCGCATTCTGGCATTATCTCTATATGAGAGGTGTTTGGGTAGATACTGGAACATCACCTACTGTATACAGATATATTGACTGGTTAATCACAGTTCCACTTCAAGTAATCGAATTCTATTTGATTCTTAGAGTGTGTACCAATGTTGGTTCAGGTTTATTCTGGAAACTACTTGGTGCATCTGTAGTTATGCTAGTTGCTGGTTTCATGGGTGAAACAGGCTCAAATGCAATGATTTGCTTCGTTGTAGGAATGGCGGCTTGGTTATACATCATATATGAAGTCTTTACTGGAGAAGCAGGAAAACTAAATGCTTCTAGCGGTAATGCCGCAGCACAGCAAGCTTTCAGCACGATCAGATTAATTGTTACCATTGGCTGGGCGATTTATCCTATTGGATATTTCCTTGGAATGGGAGCAAATCCTGATATGGCTAATGCTAACCTTATCTATAACCTTGCTGATTTTATTAACAAAATTGCATTTGGT MKYLLTLIGLISMPSFAESAGDLQTSDLTGISFWLVTAAMLAATVFFFAERDNVEGKWKTSLSVAGLVTGVAFWHYLYMRGVWVDTGTSPTVYRYIDWLITVPLQVIEFYLILRVCTNVGSGLFWKLLGASVVMLVAGFMGETGSNAMICFVVGMAAWLYIIYEVFTGEAGKLNASSGNAAAQQAFSTIRLIVTIGWAIYPIGYFLGMGANPDMANANLIYNLADFINKIAFG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAATATTTATTGACTCTCATTGGTTTGATAAGCATGCCTTCATTTGCTGAATCAGCAGGTGATCTTCAAACCAGTGATTTAACAGGTATTTCCTTTTGGCTTGTGACTGCAGCTATGCTTGCAGCTACTGTATTCTTTTTCGCAGAAAGAGATAACGTCGAAGGT---AAATGGAAAACATCTTTATCAGTAGCAGGTTTAGTTACTGGTGTCGCATTCTGGCATTATCTCTATATGAGAGGTGTTTGGGTA------------------------------GATACT---------------------GGAACATCACCTACTGTATACAGATATATTGACTGG------------------------TTAATCACAGTTCCACTTCAAGTAATCGAATTCTATTTGATTCTTAGAGTG---------TGT---ACCAATGTTGGTTCA---GGTTTA------------------------------------TTCTGGAAA---CTACTTGGTGCATCTGTAGTTATGCTAGTTGCTGGTTTCATGGGTGAA---------ACA------------------GGC------TCA------------------------------------------------------------------------------------------------------AATGCA------------------ATGATTTGC---TTCGTTGTAGGAATGGCGGCTTGGTTATACATCATATATGAAGTC---------------TTT------ACT---GGAGAAGCAGGAAAACTAAATGCTTCT------AGC---GGTAATGCCGCAGCA---CAG---CAA---GCT---TTC---AGC---ACGATC---AGATTAATTGTTACCATT---------------------------------------------------------------GGCTGG---------GCGATTTATCCTATTGGATATTTCCTTGGAATGGGA---------------------------------------GCAAATCCT---GATATGGCTAATGCTAACCTTATCTATAACCTTGCTGATTTTATTAACAAAATTGCATTTGGT------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------MKYLLTLIGLISMPSFAESAGDLQTSDLTGISFWLVTAAMLAATVFFFAERDNVEG-KWKTSLSVAGLVTGVAFWHYLYMRGVWV----------DT-------GTSPTVYRYIDW--------LITVPLQVIEFYLILRV---C-TNVGS-GL------------FWK-LLGASVVMLVAGFMGE---T------G--S----------------------------------NA------MIC-FVVGMAAWLYIIYEV-----F--T-GEAGKLNAS--S-GNAAA-Q-Q-A-F-S-TI-RLIVTI---------------------GW---AIYPIGYFLGMG-------------ANP-DMANANLIYNLADFINKIAFG---------------------------------------------------- [IV-Gamma5-SAR86a]_1105159845638 [IV-Gamma5-SAR86a] JCVI_ORF_1105159845638 jcvi|1105159845638| 1105159845638 JCVI ORF 1105159845638 1105159845638 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 15-MAY-2003 Open_Ocean/5m_depth/S_36.7_psu/GS001c/Hydrostation_S/Sargasso_Sea Sargasso Sea marine 32.166668 -64.5 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf GGCGGAACGATGTTAGCAGCTACAGTCTTTTTCTTCGCGGAAAGAGATGTGGTCAAAGGTAAGTGGAAAACTTCGCTATCAGTAGCTGGTTTAGTTACTGGTGTTGCGTTCTGGCATTATCTATATATGAGAGGTGTATGGGCTGATACTGGCACATCACCAACTGTATACAGATACATTGACTGGTTAATTACAGTTCCATTACAAATAATTGAATTTTATTTGATCCTAAGAGTTTGTACTAATGTAGGTTCTGGATTGTTCTGGAAACTTCTTGGTGCATCACTTGTAATGCTTATTGCAGGTTTCTTAGGAGAAATTGGATCTGCACCAGCATGGTCAGCATTTATTGTTGGGATGGTGGCTTGGTTGTATATCATATGGGAGGTATTTTCAGGTGAAGCTGGAAAACTTAATGCCTCAAGTGGTAATGCAGCCGCTCAAAGCGCTTTCAGCACAATCAGACTAATTGTGACTATTGGTTGGGCAATATACCCACTTGGTTACATATTAGGTGTTGGTAGCAATCCTGACATGGCAAACGCAAACATAATTTATAACCTTGCTGATTTTATTAATAAAATTGCATTTGGGTTAGCTATTTATGTTGCTGCTGTTAGTGATTCAGAA GGTMLAATVFFFAERDVVKGKWKTSLSVAGLVTGVAFWHYLYMRGVWADTGTSPTVYRYIDWLITVPLQIIEFYLILRVCTNVGSGLFWKLLGASLVMLIAGFLGEIGSAPAWSAFIVGMVAWLYIIWEVFSGEAGKLNASSGNAAAQSAFSTIRLIVTIGWAIYPLGYILGVGSNPDMANANIIYNLADFINKIAFGLAIYVAAVSDSE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCGGAACGATGTTAGCAGCTACAGTCTTTTTCTTCGCGGAAAGAGATGTGGTCAAAGGT---AAGTGGAAAACTTCGCTATCAGTAGCTGGTTTAGTTACTGGTGTTGCGTTCTGGCATTATCTATATATGAGAGGTGTATGGGCT------------------------------GATACT---------------------GGCACATCACCAACTGTATACAGATACATTGACTGG------------------------TTAATTACAGTTCCATTACAAATAATTGAATTTTATTTGATCCTAAGAGTT---------TGT---ACTAATGTAGGTTCT---GGATTG------------------------------------TTCTGGAAA---CTTCTTGGTGCATCACTTGTAATGCTTATTGCAGGTTTCTTAGGAGAA---------ATT------------------GGA------TCT---------------------------------GCA------------------------------------------------------------------CCAGCA------------------TGGTCAGCA---TTTATTGTTGGGATGGTGGCTTGGTTGTATATCATATGGGAGGTA---------------TTT------TCA---GGTGAAGCTGGAAAACTTAATGCCTCA------AGT---GGTAATGCAGCCGCT---CAA---AGC---GCT---TTC---AGC---ACAATC---AGACTAATTGTGACTATT---------------------------------------------------------------GGTTGG---------GCAATATACCCACTTGGTTACATATTAGGTGTTGGT---------------------------------------AGCAATCCT---GACATGGCAAACGCAAACATAATTTATAACCTTGCTGATTTTATTAATAAAATTGCATTTGGGTTAGCTATTTATGTTGCTGCTGTTAGTGAT---TCAGAA--------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------GGTMLAATVFFFAERDVVKG-KWKTSLSVAGLVTGVAFWHYLYMRGVWA----------DT-------GTSPTVYRYIDW--------LITVPLQIIEFYLILRV---C-TNVGS-GL------------FWK-LLGASLVMLIAGFLGE---I------G--S-----------A----------------------PA------WSA-FIVGMVAWLYIIWEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-S-TI-RLIVTI---------------------GW---AIYPLGYILGVG-------------SNP-DMANANIIYNLADFINKIAFGLAIYVAAVSD-SE--------------------------------------- [IV-Gamma5-SAR86a]_1105164687286 [IV-Gamma5-SAR86a] JCVI_ORF_1105164687286_GS031_Coastal_upwelling_12m jcvi|1105164687286| 1105164687286 JCVI ORF 1105164687286 1105164687286 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 10-FEB-2004 Coastal_upwelling/12m_depth/S_n.a/GS031/Upwelling/Fernandina_Island/Galapagos_Islands Pacific Ocean marine -0.3011111 -91.651665 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATAATAGGAGTAAACATGAAATATCTATTAGCTTTAGTCGGTGTCGTTGCAATGCCTAGCTTTGCAGCTGATCTTTCGACTAACGATATGACAGGTATTACTTTTTGGCTAGTAACTGCTGCAATGTTGGCAGCTACTGTCTTTTTCTTTGCAGAAAGAGATGTAGTCAAAGGTAAATGGAAAACTTCACTTTCAGTAGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTATCTTTATATGAGAGGTGTTTGGGCTGATACTGGCACATCACCAACTGTATACAGATATATTGACTGGTTAATAACAGTGCCTCTACAAATAATTGAATTTTATTTGATACTGAGGGTTTGCACTAATGTAGGTTCAGGATTGTTCTGGAAACTTCTTGTTGCATCACTTGTTATGCTTATTGCAGGTTTCTTAGGTGAAATCGGATCTGCACCAGCATGGCCAGCGTTTATAGTCGGGATGATAGCTTGGTTATACATTATCTATGAGGTGTTCTCTGGTGAAGCCGGACAACTCAATGCCTCTAGTGGTAATGCTGCCGCTCAAAGCGCTTTTAGTACTATAAGATTAATCGTAACTTTTGGATGGGCTATTTATCCAATAGGTTATATCTTAGGTGTTGGAAGTAATCCTGATATGGCAAATGCAAACATAATCTATAACCTTGCTGATTTTATTAATAAAATTGCGTTTGGTTTAGCGATATATGTTGCTGCCGTAAGCGATTCAGAC IIGVNMKYLLALVGVVAMPSFAADLSTNDMTGITFWLVTAAMLAATVFFFAERDVVKGKWKTSLSVAGLVTGVAFWHYLYMRGVWADTGTSPTVYRYIDWLITVPLQIIEFYLILRVCTNVGSGLFWKLLVASLVMLIAGFLGEIGSAPAWPAFIVGMIAWLYIIYEVFSGEAGQLNASSGNAAAQSAFSTIRLIVTFGWAIYPIGYILGVGSNPDMANANIIYNLADFINKIAFGLAIYVAAVSDSD ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATAGGAGTAAACATGAAATATCTATTAGCTTTAGTCGGTGTCGTTGCAATGCCTAGCTTTGCA---------GCTGATCTTTCGACTAACGATATGACAGGTATTACTTTTTGGCTAGTAACTGCTGCAATGTTGGCAGCTACTGTCTTTTTCTTTGCAGAAAGAGATGTAGTCAAAGGT---AAATGGAAAACTTCACTTTCAGTAGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTATCTTTATATGAGAGGTGTTTGGGCT------------------------------GATACT---------------------GGCACATCACCAACTGTATACAGATATATTGACTGG------------------------TTAATAACAGTGCCTCTACAAATAATTGAATTTTATTTGATACTGAGGGTT---------TGC---ACTAATGTAGGTTCA---GGATTG------------------------------------TTCTGGAAA---CTTCTTGTTGCATCACTTGTTATGCTTATTGCAGGTTTCTTAGGTGAA---------ATC------------------GGA------TCT---------------------------------GCA------------------------------------------------------------------CCAGCA------------------TGGCCAGCG---TTTATAGTCGGGATGATAGCTTGGTTATACATTATCTATGAGGTG---------------TTC------TCT---GGTGAAGCCGGACAACTCAATGCCTCT------AGT---GGTAATGCTGCCGCT---CAA---AGC---GCT---TTT---AGT---ACTATA---AGATTAATCGTAACTTTT---------------------------------------------------------------GGATGG---------GCTATTTATCCAATAGGTTATATCTTAGGTGTTGGA---------------------------------------AGTAATCCT---GATATGGCAAATGCAAACATAATCTATAACCTTGCTGATTTTATTAATAAAATTGCGTTTGGTTTAGCGATATATGTTGCTGCCGTAAGCGAT---TCAGAC--------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------IIGVNMKYLLALVGVVAMPSFA---ADLSTNDMTGITFWLVTAAMLAATVFFFAERDVVKG-KWKTSLSVAGLVTGVAFWHYLYMRGVWA----------DT-------GTSPTVYRYIDW--------LITVPLQIIEFYLILRV---C-TNVGS-GL------------FWK-LLVASLVMLIAGFLGE---I------G--S-----------A----------------------PA------WPA-FIVGMIAWLYIIYEV-----F--S-GEAGQLNAS--S-GNAAA-Q-S-A-F-S-TI-RLIVTF---------------------GW---AIYPIGYILGVG-------------SNP-DMANANIIYNLADFINKIAFGLAIYVAAVSD-SD--------------------------------------- [IV-Gamma5-SAR86a]_1112688665481 [IV-Gamma5-SAR86a] JCVI_ORF_1112688665481_GS114_Open_Ocean_2m jcvi|1112688665481| 1112688665481 JCVI ORF 1112688665481 1112688665481 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 15-AUG-2005 Open_Ocean/2m_depth/S_33.1_psu/GS114/500_Miles_west_of_the_Seychelles_in_the_Indian_Ocean/Indian_Ocean Indian Ocean marine -4.990278 64.97667 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TATCTATTAGCTTTAGTCGGTGTCGTTGCAATGCCTAGCTTTGCAGCTGATCTTTCGACTAACGATATGACAGGTATTACTTTTTGGCTAGTAACTGCTGCAATGTTGGCAGCTACTGTCTTTTTCTTTGCAGAAAGAGATGTAGTCAAAGGTAAATGGAAAACTTCACTTTCAGTAGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTATCTTTATATGAGAGGTGTTTGGGCTGATACTGGCACATCACCAACTGTATACAGATATATTGACTGGTTGATAACAGTACCTCTACAAATAATTGAATTTTATTTGATACTGAGGGTTTGCACTAATGTAGGTTCTGGATTGTTCTGGAAACTTCTTGTTGCATCACTTGTTATGCTTATTGCAGGTTTCTTAGGTGAAATCGGATCTGCACCAGCATGGCCAGCGTTTATAATCGGGATGATAGCTTGGTTATACATTATCTATGAGGTGTTCTCTGGTGAAGCCGGACAACTCAATGCCTCTAGTGGTAATGCTGCCGCTCAAAGCGCTTTTAGTACCATAAGATTAATCGTAACTTTTGGATGGGCTATTTATCCAATAGGTTATATCTTAGGTGTTGGAAGTAATCCTGATATGGCAAATGCAAATATAATCTATAACCTTGCTGATTTTATTAATAAAATTGCGTTTGGTTTAGCGATATATGTTGCTGCTGTAAGCGATTCAGAC YLLALVGVVAMPSFAADLSTNDMTGITFWLVTAAMLAATVFFFAERDVVKGKWKTSLSVAGLVTGVAFWHYLYMRGVWADTGTSPTVYRYIDWLITVPLQIIEFYLILRVCTNVGSGLFWKLLVASLVMLIAGFLGEIGSAPAWPAFIIGMIAWLYIIYEVFSGEAGQLNASSGNAAAQSAFSTIRLIVTFGWAIYPIGYILGVGSNPDMANANIIYNLADFINKIAFGLAIYVAAVSDSD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCTATTAGCTTTAGTCGGTGTCGTTGCAATGCCTAGCTTTGCA---------GCTGATCTTTCGACTAACGATATGACAGGTATTACTTTTTGGCTAGTAACTGCTGCAATGTTGGCAGCTACTGTCTTTTTCTTTGCAGAAAGAGATGTAGTCAAAGGT---AAATGGAAAACTTCACTTTCAGTAGCTGGTTTAGTTACTGGTGTGGCGTTTTGGCATTATCTTTATATGAGAGGTGTTTGGGCT------------------------------GATACT---------------------GGCACATCACCAACTGTATACAGATATATTGACTGG------------------------TTGATAACAGTACCTCTACAAATAATTGAATTTTATTTGATACTGAGGGTT---------TGC---ACTAATGTAGGTTCT---GGATTG------------------------------------TTCTGGAAA---CTTCTTGTTGCATCACTTGTTATGCTTATTGCAGGTTTCTTAGGTGAA---------ATC------------------GGA------TCT---------------------------------GCA------------------------------------------------------------------CCAGCA------------------TGGCCAGCG---TTTATAATCGGGATGATAGCTTGGTTATACATTATCTATGAGGTG---------------TTC------TCT---GGTGAAGCCGGACAACTCAATGCCTCT------AGT---GGTAATGCTGCCGCT---CAA---AGC---GCT---TTT---AGT---ACCATA---AGATTAATCGTAACTTTT---------------------------------------------------------------GGATGG---------GCTATTTATCCAATAGGTTATATCTTAGGTGTTGGA---------------------------------------AGTAATCCT---GATATGGCAAATGCAAATATAATCTATAACCTTGCTGATTTTATTAATAAAATTGCGTTTGGTTTAGCGATATATGTTGCTGCTGTAAGCGAT---TCAGAC--------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------YLLALVGVVAMPSFA---ADLSTNDMTGITFWLVTAAMLAATVFFFAERDVVKG-KWKTSLSVAGLVTGVAFWHYLYMRGVWA----------DT-------GTSPTVYRYIDW--------LITVPLQIIEFYLILRV---C-TNVGS-GL------------FWK-LLVASLVMLIAGFLGE---I------G--S-----------A----------------------PA------WPA-FIIGMIAWLYIIYEV-----F--S-GEAGQLNAS--S-GNAAA-Q-S-A-F-S-TI-RLIVTF---------------------GW---AIYPIGYILGVG-------------SNP-DMANANIIYNLADFINKIAFGLAIYVAAVSD-SD--------------------------------------- [IV-Gamma5-SAR86a]_DQ203473 [IV-Gamma5-SAR86a] medHO10F12_env_samples_DQ203473 gi|77547394|gb|DQ203473| Uncultured bacterium clone medHO10F12 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10F12 predicted proteorhodopsin gene, partial cds DQ203473 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGACTGGTTGATAACTGTTCCACTTCAAATAGTGGAGTTCTACCTCATCCTAGCAGCTGTTACTAGCGTAAGCGCAAGCTTATTCTGGAAACTGCTTGTTGGTTCACTAGTTATGTTAATTGGTGGATATTTGGGTGAAGCTGGATACATGGCTAAAATGCCTGCATTTGCAATAGGTATGCTCGGTTGGGCTTACATTATTTACTTGATCTTTGCTGGCGAAGCTGCCAACGTTAATGCTTCAAGTGGTAATGCTGCTAGCCAATATGCCTTCAAAGCAATCAGAATGATTGTTCTTGTTGGGTGGGCAATTTATCCA RYIDWLITVPLQIVEFYLILAAVTSVSASLFWKLLVGSLVMLIGGYLGEAGYMAKMPAFAIGMLGWAYIIYLIFAGEAANVNASSGNAASQYAFKAIRMIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGACTGG------------------------TTGATAACTGTTCCACTTCAAATAGTGGAGTTCTACCTCATCCTAGCAGCT---------GTT---ACTAGCGTAAGCGCA---AGCTTA------------------------------------TTCTGGAAA---CTGCTTGTTGGTTCACTAGTTATGTTAATTGGTGGATATTTGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------GCTAAA------------------ATGCCTGCA---TTTGCAATAGGTATGCTCGGTTGGGCTTACATTATTTACTTGATC---------------TTT------GCT---GGCGAAGCTGCCAACGTTAATGCTTCA------AGT---GGTAATGCTGCTAGC---CAA---TAT---GCC---TTC---AAA---GCAATC---AGAATGATTGTTCTTGTT---------------------------------------------------------------GGGTGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TSVSA-SL------------FWK-LLVGSLVMLIGGYLGE---A------G--Y-----------M----------------------AK------MPA-FAIGMLGWAYIIYLI-----F--A-GEAANVNAS--S-GNAAS-Q-Y-A-F-K-AI-RMIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_EU079251 [IV-Gamma5-SAR86a] clone_B_Mtd1_014_EU079251 gi|156106661|gb|EU079251| Uncultured organism clone B Mtd1 014 putative proteorhodopsin gene, partial cds. Uncultured organism clone B Mtd1 014 putative proteorhodopsin gene, partial cds. EU079251 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump na ; na light-energy conversion (ion transport) unknown [unclassified sequences/environmental samples] taxon:155900 genomic DNA other 27-FEB-2008 #na Sargasso Sea surface water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99-109 (2008) 18211270 #na GGATATTTAGGTGAAGCTGGATACATGGCTAAAATGCCTGCATTCGCAATTGGTATGATCGGTTGGGCTTACATTATTTACTTGATCTTCGCTGGCGAAGCTGCCAACGTTAATGCATCAAGTGGAAATGCGGCCTCACAAATGGCTTTTAAATCTATTAGAATGATTGTAACAATAGGTTGGGC GYLGEAGYMAKMPAFAIGMIGWAYIIYLIFAGEAANVNASSGNAASQMAFKSIRMIVTIGW ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGATATTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------GCTAAA------------------ATGCCTGCA---TTCGCAATTGGTATGATCGGTTGGGCTTACATTATTTACTTGATC---------------TTC------GCT---GGCGAAGCTGCCAACGTTAATGCATCA------AGT---GGAAATGCGGCCTCA---CAA---ATG---GCT---TTT---AAA---TCTATT---AGAATGATTGTAACAATA---------------------------------------------------------------GGTTGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GYLGE---A------G--Y-----------M----------------------AK------MPA-FAIGMIGWAYIIYLI-----F--A-GEAANVNAS--S-GNAAS-Q-M-A-F-K-SI-RMIVTI---------------------GW--------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_1112709441725 [IV-Proteo4-d] JCVI_ORF_1112709441725_GS120_Open_Ocean_3m jcvi|1112709441725| 1112709441725 JCVI ORF 1112709441725 1112709441725 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 27-sept-05 Open_Ocean/3m_depth/S_35.6_psu/GS120/Madagascar_Waters/Indian_Ocean Indian Ocean marine -26.035 50.123055 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGTTTGCTTTTCTAAATAAAGGTGTAAAAGCGTCGATGTTGGCTGGTGTGTTGGTAGCTATACCCACAGTTGCAAATGCCGCCACGGCGATGCTCGCATCGAACGACTATGTTGGGATCTCATTCTGGACGATCTCAATGGCGATGGTCGCAGCCACAATATTTTTCTTGATGGAAGCCGGCCGGCTGTCAGGAAAGTGGAAAACATCAATGACAGTTGGTGCATTGGTTACCCTAATTGCTGCGGTACATTACTTCTACATGAGGGACGTATGGGTTGAAACAGGCGAATCGCCAACAGTATACCGGTATGTCGACTGGTTGATCACAGTTCCGCTGCAGATGGTAGAATTCTACTTTATCCTCGCTGCCGTTATGGCGGTCAGCGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTCGTGATGTTAGGGGCAGGATACGCTGGTGAGGCTGGCTTGATCAACGCCTGGGCAGGCTTTATTGTAGGTTTGGCTGGATGGGCATACATCTTGTACGAAATCTTTGCTGGCGAGGCAGGCAAGGCTTCTGCCGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTTACAGTCGGGTGGGCAATCTATCCACTGGGCTACTTCTTTGGATACCTCCAAGGAGCTGCTGACGATGTGACACTTAATGTAATTTACAACGTGGCGGATGTGATTAATAAAATCGCGTTCGTTGGCATAATTTGGGCAGCTGCTAACGCTGAGACAAAAGCCGCT MFAFLNKGVKASMLAGVLVAIPTVANAATAMLASNDYVGISFWTISMAMVAATIFFLMEAGRLSGKWKTSMTVGALVTLIAAVHYFYMRDVWVETGESPTVYRYVDWLITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTVGWAIYPLGYFFGYLQGAADDVTLNVIYNVADVINKIAFVGIIWAAANAETKAA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTTTGCTTTTCTAAATAAAGGTGTAAAAGCGTCGATGTTGGCTGGTGTGTTGGTAGCTATACCCACAGTTGCAAATGCCGCCACGGCGATGCTCGCATCGAACGACTATGTTGGGATCTCATTCTGGACGATCTCAATGGCGATGGTCGCAGCCACAATATTTTTCTTGATGGAAGCCGGCCGGCTGTCAGGA---AAGTGGAAAACATCAATGACAGTTGGTGCATTGGTTACCCTAATTGCTGCGGTACATTACTTCTACATGAGGGACGTATGGGTT------------------------------GAAACA---------------------GGCGAATCGCCAACAGTATACCGGTATGTCGACTGG------------------------TTGATCACAGTTCCGCTGCAGATGGTAGAATTCTACTTTATCCTCGCTGCC---------GTT---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTCGTGATGTTAGGGGCAGGATACGCTGGTGAG---------GCT------------------GGC------TTG---------------------------------ATC------------------------------------------------------------------AACGCC------------------TGGGCAGGC---TTTATTGTAGGTTTGGCTGGATGGGCATACATCTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAGGCTTCTGCCGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTTACAGTC---------------------------------------------------------------GGGTGG---------GCAATCTATCCACTGGGCTACTTCTTTGGATACCTC---------------------------------------CAAGGAGCTGCTGACGATGTGACACTTAATGTAATTTACAACGTGGCGGATGTGATTAATAAAATCGCGTTCGTTGGCATAATTTGGGCAGCTGCTAACGCTGAG---ACAAAAGCCGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------MFAFLNKGVKASMLAGVLVAIPTVANAATAMLASNDYVGISFWTISMAMVAATIFFLMEAGRLSG-KWKTSMTVGALVTLIAAVHYFYMRDVWV----------ET-------GESPTVYRYVDW--------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV---------------------GW---AIYPLGYFFGYL-------------QGAADDVTLNVIYNVADVINKIAFVGIIWAAANAE-TKAA------------------------------------- [IV-Proteo4-d]_EU079162 [IV-Proteo4-d] NASB_17_env_samples_EU079162 gi|156106484|gb|EU079162| Uncultured organism clone NASB 17 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 17 putative proteorhodopsin gene, partial cds EU079162 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGTTACGTAGATTGGTTGATTACAGTTCCACTACAAATGGTTGAATTCTACTTCATCCTTGCTGCTGTTACGGCCGTCAGTGCTGGCATATTCTGGCGACTCTTGATCGGTTCGCTCGTTATGTTAGTGGCAGGTTATGCAGGTGAAGCTGGTTTGATAAACGCTTGGGCGGGCTTTATTGTAGGAATGGCCGGCTGGGCATACATTCTTTACGAGATCTTCGCTGGCGAGGCGGGTAAAGCTTCTGCTGAGAAAGCTCCAGCATCTGTGCAGAGTGCCTTTGGAACGATGCGGTTAATCGTGACTGTAGGTTGGGCTATATAC RYVDWLITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGMAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTACGTAGATTGG------------------------TTGATTACAGTTCCACTACAAATGGTTGAATTCTACTTCATCCTTGCTGCT---------GTT---ACGGCCGTCAGTGCT---GGCATA------------------------------------TTCTGGCGA---CTCTTGATCGGTTCGCTCGTTATGTTAGTGGCAGGTTATGCAGGTGAA---------GCT------------------GGT------TTG---------------------------------ATA------------------------------------------------------------------AACGCT------------------TGGGCGGGC---TTTATTGTAGGAATGGCCGGCTGGGCATACATTCTTTACGAGATC---------------TTC------GCT---GGCGAGGCGGGTAAAGCTTCTGCTGAG------AAA---GCTCCAGCATCTGTG---CAG---AGT---GCC---TTT---GGA---ACGATG---CGGTTAATCGTGACTGTA---------------------------------------------------------------GGTTGG---------GCTATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_EU079173 [IV-Proteo4-d] NASB_23_env_samples_EU079173 gi|156106506|gb|EU079173| Uncultured organism clone NASB 23 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 23 putative proteorhodopsin gene, partial cds EU079173 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGCTATGTAGACTGGTTGATCACAGTTCCGCTGCAGATGGTTGAATTCTACTTCATCCTCGCTGCTGTTACTGCGGTCAGTGCTGGCATCTTCTGGCGGCTACTGATTGGATCGCTCGTAATGTTGGTCGCAGGTTACGCCGGTGAAGCCGGCCTGATAAACGCCTGGGCTGGCTTTATCGTAGGTTTGGCAGGATGGGCTTACATCTTGTATGAAATCTTTGCTGGTGGGGCGGGCAGAGCTTCTGCAGACAAAGCCCCAGCATCGGTGCAAAGTGCCTTCGGAACAATGCGGTTGATCGTAACAGTCGGATGGGCAATATAC RYVDWLITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGGAGRASADKAPASVQSAFGTMRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTATGTAGACTGG------------------------TTGATCACAGTTCCGCTGCAGATGGTTGAATTCTACTTCATCCTCGCTGCT---------GTT---ACTGCGGTCAGTGCT---GGCATC------------------------------------TTCTGGCGG---CTACTGATTGGATCGCTCGTAATGTTGGTCGCAGGTTACGCCGGTGAA---------GCC------------------GGC------CTG---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCTGGC---TTTATCGTAGGTTTGGCAGGATGGGCTTACATCTTGTATGAAATC---------------TTT------GCT---GGTGGGGCGGGCAGAGCTTCTGCAGAC------AAA---GCCCCAGCATCGGTG---CAA---AGT---GCC---TTC---GGA---ACAATG---CGGTTGATCGTAACAGTC---------------------------------------------------------------GGATGG---------GCAATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GGAGRASAD--K-APASV-Q-S-A-F-G-TM-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_EU079172 [IV-Proteo4-d] NASB_48_env_samples_EU079172 gi|156106504|gb|EU079172| Uncultured organism clone NASB 48 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 48 putative proteorhodopsin gene, partial cds EU079172 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGATATATAGATTGGCTGATTACAGTTCCGCTGCAGATGGTTGAATTCTACTTCATCCTCGCTGCTGTCACAGCTGTTAGTGCTGGCATCTTCTGGCGGCTGCTGATTGGATCGCTCGTGATGCTGGTCGCAGGTTACGCAGGTGAAGCTGGCCTGATAAACGCCTGGGCCGGATTTATCGTAGGTCTGGCAGGATGGGCGTACATATTGTACGAAATCTTTGCTGGTGAGGCGGGCAGAGCTTCCGCTGAAAAAGCCCCAGCATCGGTGCAGAGTGCCTTTGGAACAATGCGGTTAATCGTAACGGTCGGGTGGGCGATCTAC RYIDWLITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGRASAEKAPASVQSAFGTMRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATATATAGATTGG------------------------CTGATTACAGTTCCGCTGCAGATGGTTGAATTCTACTTCATCCTCGCTGCT---------GTC---ACAGCTGTTAGTGCT---GGCATC------------------------------------TTCTGGCGG---CTGCTGATTGGATCGCTCGTGATGCTGGTCGCAGGTTACGCAGGTGAA---------GCT------------------GGC------CTG---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCCGGA---TTTATCGTAGGTCTGGCAGGATGGGCGTACATATTGTACGAAATC---------------TTT------GCT---GGTGAGGCGGGCAGAGCTTCCGCTGAA------AAA---GCCCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGA---ACAATG---CGGTTAATCGTAACGGTC---------------------------------------------------------------GGGTGG---------GCGATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGRASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_DQ339340 [IV-Proteo4-d] clone_S-S4OM-A5_DQ339340 gi|85681653|gb|DQ339340| Uncultured bacterium clone S-S4OM-A5 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-A5 predicted proteorhodopsin gene, partial cds. DQ339340 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATTACAGTTCCGCTGCAGATGGTTGAATTCTACTTCATCCTCGCTGCTGTCACAGCTGTTAGTGCTGGCATCTTCTGGCGGCTGCTGATTGGATCGCTCGTGATGCTGGTCGCAGGTTACGCAGGTGAAGCTGGCCTGATAAACGCCTGGGCCGGATTTATCGTAGGTCTGGCAGGATGGGCGTACATATTGTACGAAATCTTTGCTGGTGAGGCGGGCAGAGCTTCCGCTGAAAAAGCCCCAGCATCGGTGCAGAGTGCCTTTGGAACAATGCGGTTAATCGTAACGGTCGGGTGGGCAATCTATCCA RYIDWLITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGRASAEKAPASVQSAFGTMRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATTACAGTTCCGCTGCAGATGGTTGAATTCTACTTCATCCTCGCTGCT---------GTC---ACAGCTGTTAGTGCT---GGCATC------------------------------------TTCTGGCGG---CTGCTGATTGGATCGCTCGTGATGCTGGTCGCAGGTTACGCAGGTGAA---------GCT------------------GGC------CTG---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCCGGA---TTTATCGTAGGTCTGGCAGGATGGGCGTACATATTGTACGAAATC---------------TTT------GCT---GGTGAGGCGGGCAGAGCTTCCGCTGAA------AAA---GCCCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGA---ACAATG---CGGTTAATCGTAACGGTC---------------------------------------------------------------GGGTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGRASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_DQ339293 [IV-Proteo4-d] clone_S-S80M-E2_DQ339293 gi|85681559|gb|DQ339293| Uncultured bacterium clone S-S80M-E2 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-E2 predicted proteorhodopsin gene, partial cds. DQ339293 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATTACAGTTCCGCTGCAGATGGTTGAATTCTACTTCATCCTCGCTGCTGTCACAGCTGTTAGTGCTGGCATCTTCTGGCGGCTGCTGATTGGATCGCTCGTGATGCTGGTCGCAGGTTACGCAGGTGAAGCTGGCCTGATAAACGCCTGGGCCGGATTTATCGTAGGTCTGGCAGGATGGGCGTACATATTGTACGAAATCTTTGCTGGTGAGGCGGGCAGAGCTTCCGCTGAAAAAGCCCCAGCATCGGTGCAGAGTGCCTTTGGAACAATGCGGTTAATCGTAACGGTCGGGTGGGCCATCTATCCA RYIDWLITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGRASAEKAPASVQSAFGTMRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATTACAGTTCCGCTGCAGATGGTTGAATTCTACTTCATCCTCGCTGCT---------GTC---ACAGCTGTTAGTGCT---GGCATC------------------------------------TTCTGGCGG---CTGCTGATTGGATCGCTCGTGATGCTGGTCGCAGGTTACGCAGGTGAA---------GCT------------------GGC------CTG---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCCGGA---TTTATCGTAGGTCTGGCAGGATGGGCGTACATATTGTACGAAATC---------------TTT------GCT---GGTGAGGCGGGCAGAGCTTCCGCTGAA------AAA---GCCCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGA---ACAATG---CGGTTAATCGTAACGGTC---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGRASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_EU079167 [IV-Proteo4-d] NASB_60_env_samples_EU079167 gi|156106494|gb|EU079167| Uncultured organism clone NASB 60 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 60 putative proteorhodopsin gene, partial cds EU079167 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGATATGTAGATTGGTTAATCACCGTGCCGCTGCAAATGGTTGAATTTTACTTCATCCTTGCTGCTGTTACGGCGGTTAGCGCAGGCATCTTCTGGCGGCTGCTTATTGGGTCACTCGTCATGTTGGTCGCAGGCTACGCTGGCGAAGCTGGTCTGGTAAACGCATGGGCCGGCTTTATTGTAGGAATGGCTGGATGGTTATTCATCTTGTATGAAATCTTTGCCGGTGAGGCGGGCAAAGCTTCTGCTGAAAAAGCCCCAGCATCGGTGCAAAGCGCCTTTGGCACGATGCGGTTAATCGTGACTGTTGGATGGGCAATTTAC RYVDWLITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLVNAWAGFIVGMAGWLFILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATATGTAGATTGG------------------------TTAATCACCGTGCCGCTGCAAATGGTTGAATTTTACTTCATCCTTGCTGCT---------GTT---ACGGCGGTTAGCGCA---GGCATC------------------------------------TTCTGGCGG---CTGCTTATTGGGTCACTCGTCATGTTGGTCGCAGGCTACGCTGGCGAA---------GCT------------------GGT------CTG---------------------------------GTA------------------------------------------------------------------AACGCA------------------TGGGCCGGC---TTTATTGTAGGAATGGCTGGATGGTTATTCATCTTGTATGAAATC---------------TTT------GCC---GGTGAGGCGGGCAAAGCTTCTGCTGAA------AAA---GCCCCAGCATCGGTG---CAA---AGC---GCC---TTT---GGC---ACGATG---CGGTTAATCGTGACTGTT---------------------------------------------------------------GGATGG---------GCAATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------V----------------------NA------WAG-FIVGMAGWLFILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_EU079168 [IV-Proteo4-d] NASB_62_env_samples_EU079168 gi|156106496|gb|EU079168| Uncultured organism clone NASB 62 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 62 putative proteorhodopsin gene, partial cds EU079168 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGATATATTGATTGGTTAATCACCGTGCCGCTGCAAATGGTTGAATTTTACTTCATCCTTGCTGCTGTTACGGCGGTTAGCGCAGGCATCTTCTGGCGGCTGCTTATTGGGTCACTCGTCATGTTGGTCGCAGGCTACGCTGGCGAAGCTGGTCTGGTAAACGCATGGGCCGGCTTTATTGTAGGAATGGCTGGATGGTTATTCATCTTGTATGAAATCTTTGCCGGTGAGGCGGGCAAAGCTTCTGCTGAAAAAGCCCCAGCATCGGTGCAGAGCGCCTTTGGCACGATGCGGTTAATCGTGACTGTTGGATGGGCAATCTAC RYIDWLITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLVNAWAGFIVGMAGWLFILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATATATTGATTGG------------------------TTAATCACCGTGCCGCTGCAAATGGTTGAATTTTACTTCATCCTTGCTGCT---------GTT---ACGGCGGTTAGCGCA---GGCATC------------------------------------TTCTGGCGG---CTGCTTATTGGGTCACTCGTCATGTTGGTCGCAGGCTACGCTGGCGAA---------GCT------------------GGT------CTG---------------------------------GTA------------------------------------------------------------------AACGCA------------------TGGGCCGGC---TTTATTGTAGGAATGGCTGGATGGTTATTCATCTTGTATGAAATC---------------TTT------GCC---GGTGAGGCGGGCAAAGCTTCTGCTGAA------AAA---GCCCCAGCATCGGTG---CAG---AGC---GCC---TTT---GGC---ACGATG---CGGTTAATCGTGACTGTT---------------------------------------------------------------GGATGG---------GCAATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------V----------------------NA------WAG-FIVGMAGWLFILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_EU079169 [IV-Proteo4-d] NASB_68_env_samples_EU079169 gi|156106498|gb|EU079169| Uncultured organism clone NASB 68 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 68 putative proteorhodopsin gene, partial cds EU079169 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGATATGTAGATTGGTTAATCACCGTGCCGCTGCAAATGGTTGAATTTTACTTCATCCTTGCTGCTGTTACGGCGGTTAGCGCAGGTATCTTCTGGCGGCTACTTATTGGGTCACTCGTCATGTTGGTCGCAGGCTACGCTGGCGAAGCTGGTCTGATAAACGCATGGGCCGGCTTTATTGTGGGAATGGCTGGATGGTTATACATCTTGTACGAAATCTTTGCCGGTGAGGCGGGCAAAGCTTCTGCTGAAAAAGCCCCAGCATCGGTGCAGAGCGCCTTTGGCACGATGCGGTTAATCGTGACTGTTGGGTGGGCCATCTAC RYVDWLITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGMAGWLYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATATGTAGATTGG------------------------TTAATCACCGTGCCGCTGCAAATGGTTGAATTTTACTTCATCCTTGCTGCT---------GTT---ACGGCGGTTAGCGCA---GGTATC------------------------------------TTCTGGCGG---CTACTTATTGGGTCACTCGTCATGTTGGTCGCAGGCTACGCTGGCGAA---------GCT------------------GGT------CTG---------------------------------ATA------------------------------------------------------------------AACGCA------------------TGGGCCGGC---TTTATTGTGGGAATGGCTGGATGGTTATACATCTTGTACGAAATC---------------TTT------GCC---GGTGAGGCGGGCAAAGCTTCTGCTGAA------AAA---GCCCCAGCATCGGTG---CAG---AGC---GCC---TTT---GGC---ACGATG---CGGTTAATCGTGACTGTT---------------------------------------------------------------GGGTGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWLYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_EU079171 [IV-Proteo4-d] NASB_25_env_samples_EU079171 gi|156106502|gb|EU079171| Uncultured organism clone NASB 25 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 25 putative proteorhodopsin gene, partial cds EU079171 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGGTATATCGACTGGTTAATCACCGTGCCGCTGCAAATGGTTGAATTTTACTTCATCCTTGCTGCTGTTACGGCGGTTAGCGCAGGTATCTTCTGGCGGCTACTTATTGGGTCACTCGTCATGTTGGTCGCAGGCTACGCTGGCGAAGCTGGTCTGATAAACGCATGGGCCGGCTTTATTGTAGGAATGGCTGGATGGTTATACATCTTGTACGAAATCTTTGCCGGTGAGGCGGGCAAAGCTTCTGCTGAAAAAGCCCCAGCATCGGTGCAGAGCGCCTTTGGCACGATGCGGTTAATCGTGACTGTTGGATGGGCAATTTAC RYIDWLITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGMAGWLYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTATATCGACTGG------------------------TTAATCACCGTGCCGCTGCAAATGGTTGAATTTTACTTCATCCTTGCTGCT---------GTT---ACGGCGGTTAGCGCA---GGTATC------------------------------------TTCTGGCGG---CTACTTATTGGGTCACTCGTCATGTTGGTCGCAGGCTACGCTGGCGAA---------GCT------------------GGT------CTG---------------------------------ATA------------------------------------------------------------------AACGCA------------------TGGGCCGGC---TTTATTGTAGGAATGGCTGGATGGTTATACATCTTGTACGAAATC---------------TTT------GCC---GGTGAGGCGGGCAAAGCTTCTGCTGAA------AAA---GCCCCAGCATCGGTG---CAG---AGC---GCC---TTT---GGC---ACGATG---CGGTTAATCGTGACTGTT---------------------------------------------------------------GGATGG---------GCAATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWLYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_EU079170 [IV-Proteo4-d] NASB_40_env_samples_EU079170 gi|156106500|gb|EU079170| Uncultured organism clone NASB 40 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 40 putative proteorhodopsin gene, partial cds EU079170 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGGTATATAGACTGGTTAATCACCGTGCCGCTGCAAATGGTTGAATTTTACTTCATCCTCGCTGCTGTTACGGCGGTCAGCGCAGGCATCTTCTGGCGGCTGCTTATTGGCTCACTTGTAATGTTGGTCGCAGGCTATGCTGGTGAAGCTGGTCTGATAAACGCATGGGCCGGCTTTATAGTAGGAATGGCTGGATGGTTATACATCTTGTACGAAATCTTTGCCGGTGGGGCGGGCAAAGCTTCTGCTGAAAAAGCTCCAGCATCGGTGCAGAGCGCCTTTGGCACGATGCGGTTAATCGTGACTGTTGGTTGGGCCATTTAT RYIDWLITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGMAGWLYILYEIFAGGAGKASAEKAPASVQSAFGTMRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTATATAGACTGG------------------------TTAATCACCGTGCCGCTGCAAATGGTTGAATTTTACTTCATCCTCGCTGCT---------GTT---ACGGCGGTCAGCGCA---GGCATC------------------------------------TTCTGGCGG---CTGCTTATTGGCTCACTTGTAATGTTGGTCGCAGGCTATGCTGGTGAA---------GCT------------------GGT------CTG---------------------------------ATA------------------------------------------------------------------AACGCA------------------TGGGCCGGC---TTTATAGTAGGAATGGCTGGATGGTTATACATCTTGTACGAAATC---------------TTT------GCC---GGTGGGGCGGGCAAAGCTTCTGCTGAA------AAA---GCTCCAGCATCGGTG---CAG---AGC---GCC---TTT---GGC---ACGATG---CGGTTAATCGTGACTGTT---------------------------------------------------------------GGTTGG---------GCCATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWLYILYEI-----F--A-GGAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_EU079163 [IV-Proteo4-d] NASB_22_env_samples_EU079163 gi|156106486|gb|EU079163| Uncultured organism clone NASB 22 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 22 putative proteorhodopsin gene, partial cds EU079163 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGCTACGTTGATTGGTTGATCACAGTGCCGCTGCAGATGGTTGAATTCTACTTCATCCTGGCAGCAGTTACCGCCGTCAGCGCGGGTATCTTCTGGCGGCTTCTCATCGGATCGCTCGTGATGTTAGTCGCCGGCTACGCTGGTGAGGCAGGCCTGATTAACGCCTGGGCAGGATTTATTGTAGGAATGGCCGGCTGGCTATACATCCTGTATGAGATCTTTGCAGGTGAGGCGGGCAAAGCTTCTGCTGAAAAAGCCCCAGCATCGGTGCAGAGTGCCTTTGGAACGATGCGGTTAATCGTTACGGTTGGTTGGGCAATATAC RYVDWLITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGMAGWLYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTACGTTGATTGG------------------------TTGATCACAGTGCCGCTGCAGATGGTTGAATTCTACTTCATCCTGGCAGCA---------GTT---ACCGCCGTCAGCGCG---GGTATC------------------------------------TTCTGGCGG---CTTCTCATCGGATCGCTCGTGATGTTAGTCGCCGGCTACGCTGGTGAG---------GCA------------------GGC------CTG---------------------------------ATT------------------------------------------------------------------AACGCC------------------TGGGCAGGA---TTTATTGTAGGAATGGCCGGCTGGCTATACATCCTGTATGAGATC---------------TTT------GCA---GGTGAGGCGGGCAAAGCTTCTGCTGAA------AAA---GCCCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGA---ACGATG---CGGTTAATCGTTACGGTT---------------------------------------------------------------GGTTGG---------GCAATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWLYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_EU079165 [IV-Proteo4-d] NASB_42_env_samples_EU079165 gi|156106490|gb|EU079165| Uncultured organism clone NASB 42 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 42 putative proteorhodopsin gene, partial cds EU079165 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGCTATGTTGATTGGTTGATCACAGTGCCGCTGCAGATGGTTGAATTCTACTTCATCCTGGCAGCAGTTACCGCCGTCAGCGCGGGTATCTTCTGGCGGCTTCTCATCGGATCGCTCGTGATGTTAGTCGCCGGCTACGCTGGTGAGGCAGGCCTGATTAACGCTTGGGCCGGATTTATTGTAGGAATGGCCGGCTGGCTATATATCCTGTATGAGATCTTTGCAGGTGAGGCGGGCAAAGCTTCTGCTGAAAAAGCCCCAGCATCAGTGCAGAGTGCCTTTGGAACGATGCGGCTAATCGTTACGGTTGGTTGGGCAATTTAC RYVDWLITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGMAGWLYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTATGTTGATTGG------------------------TTGATCACAGTGCCGCTGCAGATGGTTGAATTCTACTTCATCCTGGCAGCA---------GTT---ACCGCCGTCAGCGCG---GGTATC------------------------------------TTCTGGCGG---CTTCTCATCGGATCGCTCGTGATGTTAGTCGCCGGCTACGCTGGTGAG---------GCA------------------GGC------CTG---------------------------------ATT------------------------------------------------------------------AACGCT------------------TGGGCCGGA---TTTATTGTAGGAATGGCCGGCTGGCTATATATCCTGTATGAGATC---------------TTT------GCA---GGTGAGGCGGGCAAAGCTTCTGCTGAA------AAA---GCCCCAGCATCAGTG---CAG---AGT---GCC---TTT---GGA---ACGATG---CGGCTAATCGTTACGGTT---------------------------------------------------------------GGTTGG---------GCAATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWLYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_1105122938082 [IV-Proteo4-d] JCVI_ORF_1105122938082 jcvi|1105122938082| 1105122938082 JCVI ORF 1105122938082 1105122938082 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 19-FEB-2004 Coastal/3m_depth/S_n.a/GS034/North_Seamore_Island/Galapagos_Islands North Sea marine -0.38305557 -90.279724 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGTTTGCTTTTTTAAATAAAGGTGTAAAGGCATCGATGTTGGCCGGTGCTTTAGTAGCTGTACCTACAGTTGCAAATGCTGCCACAGCGATGCTCGCATCAAACGACTATGTCGGGATCTCTTTCTGGACGATCTCGATGGCTATGGTCGCAGCTACGGTATTCTTCCTGATGGAAGCAGGCCGGCTGTCAGGGAAGTGGAAAACTTCAATGACTGTGGGTGCTTTGGTTACCCTTATCGCTGCAGTACACTATTTCTACATGAGAGACGTATGGGTCGAAACAGGCGAGTCGCCAACGGTATACCGTTACGTCGACTGGTTGATCACTGTGCCGCTGCAGATGGTTGAATTCTACTTCATCCTAGCAGCAGTTACCGCAGTCAGCGCAGGTATCTTCTGGCGGCTTCTCATCGGATCACTTGTGATGTTAGTCGCCGGCTACGCTGGTGAGGCAGGCCTGATTAACGCTTGGGCCGGATTTATTGTAGGAATGGCCGGCTGGCTATACATCCTGTATGAGATCTTTGCAGGTGAGGCGGGTAAAGCTTCTGCTGAAAAAGCCCCCGCATCAGTGCAGAGCGCCTTTGGAACGATGCGGTTAATCGTTACGGTTGGATGGGCAATTTATCCGCTAGGCTATTTCTTCGGATATCTGACGAACGCTGCAGATCCTGTAACACTAACG MFAFLNKGVKASMLAGALVAVPTVANAATAMLASNDYVGISFWTISMAMVAATVFFLMEAGRLSGKWKTSMTVGALVTLIAAVHYFYMRDVWVETGESPTVYRYVDWLITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGMAGWLYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTVGWAIYPLGYFFGYLTNAADPVTLT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTTTGCTTTTTTAAATAAAGGTGTAAAGGCATCGATGTTGGCCGGTGCTTTAGTAGCTGTACCTACAGTTGCAAATGCTGCCACAGCGATGCTCGCATCAAACGACTATGTCGGGATCTCTTTCTGGACGATCTCGATGGCTATGGTCGCAGCTACGGTATTCTTCCTGATGGAAGCAGGCCGGCTGTCAGGG---AAGTGGAAAACTTCAATGACTGTGGGTGCTTTGGTTACCCTTATCGCTGCAGTACACTATTTCTACATGAGAGACGTATGGGTC------------------------------GAAACA---------------------GGCGAGTCGCCAACGGTATACCGTTACGTCGACTGG------------------------TTGATCACTGTGCCGCTGCAGATGGTTGAATTCTACTTCATCCTAGCAGCA---------GTT---ACCGCAGTCAGCGCA---GGTATC------------------------------------TTCTGGCGG---CTTCTCATCGGATCACTTGTGATGTTAGTCGCCGGCTACGCTGGTGAG---------GCA------------------GGC------CTG---------------------------------ATT------------------------------------------------------------------AACGCT------------------TGGGCCGGA---TTTATTGTAGGAATGGCCGGCTGGCTATACATCCTGTATGAGATC---------------TTT------GCA---GGTGAGGCGGGTAAAGCTTCTGCTGAA------AAA---GCCCCCGCATCAGTG---CAG---AGC---GCC---TTT---GGA---ACGATG---CGGTTAATCGTTACGGTT---------------------------------------------------------------GGATGG---------GCAATTTATCCGCTAGGCTATTTCTTCGGATATCTG---------------------------------------ACGAACGCTGCAGATCCTGTAACACTAACG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------MFAFLNKGVKASMLAGALVAVPTVANAATAMLASNDYVGISFWTISMAMVAATVFFLMEAGRLSG-KWKTSMTVGALVTLIAAVHYFYMRDVWV----------ET-------GESPTVYRYVDW--------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWLYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV---------------------GW---AIYPLGYFFGYL-------------TNAADPVTLT------------------------------------------------------------------- [IV-Proteo4-d]_EU079164 [IV-Proteo4-d] NASB_80_env_samples_EU079164 gi|156106488|gb|EU079164| Uncultured organism clone NASB 80 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 80 putative proteorhodopsin gene, partial cds EU079164 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGATATGTTGACTGGTTGATCACTGTGCCGCTGCAGATGGTAGAATTCTACTTCATCCTGGCAGCAGTCACCGCCGTAAGCGCGGGTATCTTCTGGCGGCTTCTCATCGGATCACTTGTGATGCTGGTCGCTGGCTACGCTGGTGAGGCAGGCCTGATTAACGCTTGGGCCGGATTTATCGTCGGAATGGCCGGTTGGCTATACATCCTGTACGAGATCTTTGCAGGTGAGGCGGGCAAAGCTTCTGCTGAAAAAGCCCCAGCATCAGTGCAGAGTGCCTTTGGAACGATGCGGTTAATCGTTACGGTTGGATGGGCAATATAC RYVDWLITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGMAGWLYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATATGTTGACTGG------------------------TTGATCACTGTGCCGCTGCAGATGGTAGAATTCTACTTCATCCTGGCAGCA---------GTC---ACCGCCGTAAGCGCG---GGTATC------------------------------------TTCTGGCGG---CTTCTCATCGGATCACTTGTGATGCTGGTCGCTGGCTACGCTGGTGAG---------GCA------------------GGC------CTG---------------------------------ATT------------------------------------------------------------------AACGCT------------------TGGGCCGGA---TTTATCGTCGGAATGGCCGGTTGGCTATACATCCTGTACGAGATC---------------TTT------GCA---GGTGAGGCGGGCAAAGCTTCTGCTGAA------AAA---GCCCCAGCATCAGTG---CAG---AGT---GCC---TTT---GGA---ACGATG---CGGTTAATCGTTACGGTT---------------------------------------------------------------GGATGG---------GCAATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWLYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_EU079166 [IV-Proteo4-d] NASB_3_env_samples_EU079166 gi|156106492|gb|EU079166| Uncultured organism clone NASB 3 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 3 putative proteorhodopsin gene, partial cds EU079166 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGATACGTTGATTGGTTGATCACTGTGCCGCTGCAGATGGTTGAGTTCTACTTCATCCTGGCAGCAGTTACCGCCGTAAGTGCAGGTATATTCTGGCGGCTTCTCATCGGTTCACTTGTGATGTTGGTCGCCGGCTACGCTGGTGAGGCAGGCCTTATCAACGCCTGGGCCGGATTTATTGTGGGAATGGCTGGCTGGATATACATCCTCTATGAGATCTTTGCAGGTGAGGCGGGCAAAGCTTCTGCTGAAAAAGCCCCAGCATCAGTGCAGAGTGCCTTCGGAACGATGCGGTTAATCGTTACGGTTGGGTGGGCCATTTAC RYVDWLITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGMAGWIYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACGTTGATTGG------------------------TTGATCACTGTGCCGCTGCAGATGGTTGAGTTCTACTTCATCCTGGCAGCA---------GTT---ACCGCCGTAAGTGCA---GGTATA------------------------------------TTCTGGCGG---CTTCTCATCGGTTCACTTGTGATGTTGGTCGCCGGCTACGCTGGTGAG---------GCA------------------GGC------CTT---------------------------------ATC------------------------------------------------------------------AACGCC------------------TGGGCCGGA---TTTATTGTGGGAATGGCTGGCTGGATATACATCCTCTATGAGATC---------------TTT------GCA---GGTGAGGCGGGCAAAGCTTCTGCTGAA------AAA---GCCCCAGCATCAGTG---CAG---AGT---GCC---TTC---GGA---ACGATG---CGGTTAATCGTTACGGTT---------------------------------------------------------------GGGTGG---------GCCATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWIYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_EU079155 [IV-Proteo4-BAC17H08] NASB_12_env_samples_EU079155 gi|156106470|gb|EU079155| Uncultured organism clone NASB 12 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 12 putative proteorhodopsin gene, partial cds EU079155 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGTTATATTGATTGGCTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCAGTGGCTGTCGTCAGCGCTGGTATCTTCTGGCGCCTGATGATCGGTTCTCTAGTGATGCTGGTTGCTGGTTACCTCGGCGAAGCAGGCCTTGTTAATGCATGGCTCGGCTTTGTTGTTGGCCTGGCTGGATGGGCATACATCCTTTATGAGATCTTCGCTGGCGAAGCCGGCAAGGTTTCAGCGGAGTCCGCTCCGGAAGCTGTCCAGAAGTCGTTCGGCACGATGCGTATGATCGTGACCGTCGGCTGGGCAATTTAT RYIDWLITVPLQMVEFYFILAAVAVVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGLAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTATATTGATTGG------------------------CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCA---------GTG---GCTGTCGTCAGCGCT---GGTATC------------------------------------TTCTGGCGC---CTGATGATCGGTTCTCTAGTGATGCTGGTTGCTGGTTACCTCGGCGAA---------GCA------------------GGC------CTT---------------------------------GTT------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTTGTTGGCCTGGCTGGATGGGCATACATCCTTTATGAGATC---------------TTC------GCT---GGCGAAGCCGGCAAGGTTTCAGCGGAG------TCC---GCTCCGGAAGCTGTC---CAG---AAG---TCG---TTC---GGC---ACGATG---CGTATGATCGTGACCGTC---------------------------------------------------------------GGCTGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGLAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_1105124581058 [IV-Proteo4-BAC17H08] JCVI_ORF_1105124581058 jcvi|1105124581058| 1105124581058 JCVI ORF 1105124581058 1105124581058 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 22-MAY-2004 Coral_Reef_Atoll/1m_depth/S_34.2_psu/GS051/Rangirora_Atoll/Polynesia_Archipelagos Pacific Ocean marine -15.143611 -147.435 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf CTGGACCATTTCGATGGCCATGATGGCAGCCGCAATCTTCTTCTGATGGAAGCAGGTCGCCTGCCTGGCAAGTGGAAGACCGCAATGACGATTGGTGCACTCGTGCAGATCGTTGCAGCGGTACACTATTTCTACATGCGCGACGTATGGGTCAGCACAGGTGAAACGCCAACAGTTTACAGGTATGTTGACTGGTTGATCACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCGGTGGCTGTTGTCAGCGCCGGTATCTTCTGGCGCCTGATGATCGGTTCGCTGGTAATGCTGGTTGCCGGTTACCTCGGCGAAGCAGGTCTTGTTAATGCATGGCTTGGCTTTGTTGTTGGCATGGCTGGATGGGCATACATCCTTTACGAGATCTTCGCTGGCGAAGCCGGCAAGGTTTCCGCGGAGTCCGCTCCGGAGGCTGTCCAGAAGTCGTTCGGCACGATGCGTATGATCGTGACCGTCGGCTGGGCAATCTATCCGCTCGGCTACTTCCTTGGCTACCTGAACGGTGCTGCTGACGCGGTCACCCTGAACGTCATCTACAACGTCGCCGACGTTGTGAACAAGATCGCGTTCGTAGGTGTGATCTGGGCAGCTGCCAACGCAGAGTCCGCGAAGGCC LDHFDGHDGSRNLLLMEAGRLPGKWKTAMTIGALVQIVAAVHYFYMRDVWVSTGETPTVYRYVDWLITVPLQMVEFYFILAAVAVVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRMIVTVGWAIYPLGYFLGYLNGAADAVTLNVIYNVADVVNKIAFVGVIWAAANAESAKA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGGACCATTTCGATGGCCATGATGGCAGCCGCAATCTTCTTCTGATGGAAGCAGGTCGCCTGCCTGGC---AAGTGGAAGACCGCAATGACGATTGGTGCACTCGTGCAGATCGTTGCAGCGGTACACTATTTCTACATGCGCGACGTATGGGTC------------------------------AGCACA---------------------GGTGAAACGCCAACAGTTTACAGGTATGTTGACTGG------------------------TTGATCACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCG---------GTG---GCTGTTGTCAGCGCC---GGTATC------------------------------------TTCTGGCGC---CTGATGATCGGTTCGCTGGTAATGCTGGTTGCCGGTTACCTCGGCGAA---------GCA------------------GGT------CTT---------------------------------GTT------------------------------------------------------------------AATGCA------------------TGGCTTGGC---TTTGTTGTTGGCATGGCTGGATGGGCATACATCCTTTACGAGATC---------------TTC------GCT---GGCGAAGCCGGCAAGGTTTCCGCGGAG------TCC---GCTCCGGAGGCTGTC---CAG---AAG---TCG---TTC---GGC---ACGATG---CGTATGATCGTGACCGTC---------------------------------------------------------------GGCTGG---------GCAATCTATCCGCTCGGCTACTTCCTTGGCTACCTG---------------------------------------AACGGTGCTGCTGACGCGGTCACCCTGAACGTCATCTACAACGTCGCCGACGTTGTGAACAAGATCGCGTTCGTAGGTGTGATCTGGGCAGCTGCCAACGCAGAG---TCCGCGAAGGCC--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------LDHFDGHDGSRNLLLMEAGRLPG-KWKTAMTIGALVQIVAAVHYFYMRDVWV----------ST-------GETPTVYRYVDW--------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RMIVTV---------------------GW---AIYPLGYFLGYL-------------NGAADAVTLNVIYNVADVVNKIAFVGVIWAAANAE-SAKA------------------------------------- [IV-Proteo4-BAC17H08]_1105156075278 [IV-Proteo4-BAC17H08] JCVI_ORF_1105156075278 jcvi|1105156075278| 1105156075278 JCVI ORF 1105156075278 1105156075278 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.22_0.8 other #na 26-FEB-2003 Open_Ocean/5m_depth/S_36.7_psu/GS000b/Sargasso_Station_11/Sargasso_Sea Sargasso Sea marine 31.175 -64.32433 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TTTCCTGATGGAAGCTGGTCGCCTGCCTGCAAGTGGAAGACCGCAATGACGATTGGTGCACTCGTGCAGATTGTGGCAGCGGTACACTATTTCTACATGCGCGACGTATGGGTCAGCACTGGTGAAACGCCAACCGTTTACAGGTATGTTGACTGGTTGATCACTGTCCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCAGCGGTGGCTGTTGTTAGCGCTGGTATGTTCTGGCGCTTGATGATCGGTTCGCTGGTAATGCTGGTTGCTGGTTACCTTGGTGAAGCAGGCCTTGTGAATGCATGGCTCGGCTTTGTCGTAGGTATGGCCGGATGGGCATACATCCTCTACGAGATCTTTGCTGGTGAGGCTGGCAAGGTGTCCGCAGAGTCCGCGCCGGAGGCTGTTCAGAAGTCGTTTAGCACGATGCGTATGATCGTGACCGTCGGCTGGGCAATCTATCCGCTCGGCTATTTCCTCGGTTACCTGAACGGTGCTGCTGACGCTGTCACCCTGAACGTTATCTACAACGTCGCTGACGTTGTAAACAAGATCGCGTTCGTTGGTGTGATCTGGGCAGCTGCCAACGCAGAAGCCGCGAAAGCC FPDGSWSPACKWKTAMTIGALVQIVAAVHYFYMRDVWVSTGETPTVYRYVDWLITVPLQMVEFYFILAAVAVVSAGMFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFSTMRMIVTVGWAIYPLGYFLGYLNGAADAVTLNVIYNVADVVNKIAFVGVIWAAANAEAAKA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCCTGATGGAAGCTGGTCGCCTGCCTGCAAGTGGAAGACCGCAATGACGATTGGTGCACTCGTGCAGATTGTGGCAGCGGTACACTATTTCTACATGCGCGACGTATGGGTC------------------------------AGCACT---------------------GGTGAAACGCCAACCGTTTACAGGTATGTTGACTGG------------------------TTGATCACTGTCCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCAGCG---------GTG---GCTGTTGTTAGCGCT---GGTATG------------------------------------TTCTGGCGC---TTGATGATCGGTTCGCTGGTAATGCTGGTTGCTGGTTACCTTGGTGAA---------GCA------------------GGC------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTCGTAGGTATGGCCGGATGGGCATACATCCTCTACGAGATC---------------TTT------GCT---GGTGAGGCTGGCAAGGTGTCCGCAGAG------TCC---GCGCCGGAGGCTGTT---CAG---AAG---TCG---TTT---AGC---ACGATG---CGTATGATCGTGACCGTC---------------------------------------------------------------GGCTGG---------GCAATCTATCCGCTCGGCTATTTCCTCGGTTACCTG---------------------------------------AACGGTGCTGCTGACGCTGTCACCCTGAACGTTATCTACAACGTCGCTGACGTTGTAAACAAGATCGCGTTCGTTGGTGTGATCTGGGCAGCTGCCAACGCAGAA---GCCGCGAAAGCC--------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------FPDGSWSPACKWKTAMTIGALVQIVAAVHYFYMRDVWV----------ST-------GETPTVYRYVDW--------LITVPLQMVEFYFILAA---V-AVVSA-GM------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-S-TM-RMIVTV---------------------GW---AIYPLGYFLGYL-------------NGAADAVTLNVIYNVADVVNKIAFVGVIWAAANAE-AAKA------------------------------------- [IV-Proteo4-BAC17H08]_1105097895640 [IV-Proteo4-BAC17H08] JCVI_ORF_1105097895640 jcvi|1105097895640| 1105097895640 JCVI ORF 1105097895640 1105097895640 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 01-FEB-2004 Open_Ocean/2m_depth/S_32.6_psu/GS026/134_miles_NE_of_Galapagos/Galapagos_Islands Pacific Ocean marine 1.2641667 -90.295 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf CTGGACCATATCGATGGCCATGATGGCGGCCGCAATCTTCTTCTGATGGAAGCAGGTCGCCTGCCTGGCAAGTGGAAGACCGCAATGACGATTGGTGCACTCGTGCAGATCGTTGCAGCGGTACACTATTTCTACATGCGCGACGTATGGGTCAGCACTGGTGAAACGCCAACCGTTTACAGGTATGTTGACTGGTTGATCACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCGGTGGCCGTTGTTAGCGCTGGTATGTTCTGGCGCTTGATGATCGGTTCGCTGGTAATGCTGGTTGCTGGTTACCTTGGTGAAGCAGGCCTTGTGAATGCATGGCTCGGCTTTGTCGTAGGTATGGCAGGATGGGCATACATCCTCTACGAGATCTTTGCTGGTGAAGCTGGCAAGGTGTCCGCAGAGTCCGCGCCGGAGGCTGTTCAGAAGTCGTTCAGCACGATGCGTATGATTGTGACCGTCGGCTGGGCAATTTATCCGCTCGGCTATTTCCTCGGTTACCTGAACGGTGCTGCTGACGCTGTCACCTTGAACGTTATCTACAACGTCGCTGACGTTGTGAACAAGATCGCGTTCGTTGGTGTGATCTGGGCAGCTGCCAACGCAGAAGCCGCGAAAGCC LDHIDGHDGGRNLLLMEAGRLPGKWKTAMTIGALVQIVAAVHYFYMRDVWVSTGETPTVYRYVDWLITVPLQMVEFYFILAAVAVVSAGMFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFSTMRMIVTVGWAIYPLGYFLGYLNGAADAVTLNVIYNVADVVNKIAFVGVIWAAANAEAAKA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGGACCATATCGATGGCCATGATGGCGGCCGCAATCTTCTTCTGATGGAAGCAGGTCGCCTGCCTGGC---AAGTGGAAGACCGCAATGACGATTGGTGCACTCGTGCAGATCGTTGCAGCGGTACACTATTTCTACATGCGCGACGTATGGGTC------------------------------AGCACT---------------------GGTGAAACGCCAACCGTTTACAGGTATGTTGACTGG------------------------TTGATCACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCG---------GTG---GCCGTTGTTAGCGCT---GGTATG------------------------------------TTCTGGCGC---TTGATGATCGGTTCGCTGGTAATGCTGGTTGCTGGTTACCTTGGTGAA---------GCA------------------GGC------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTCGTAGGTATGGCAGGATGGGCATACATCCTCTACGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTGTCCGCAGAG------TCC---GCGCCGGAGGCTGTT---CAG---AAG---TCG---TTC---AGC---ACGATG---CGTATGATTGTGACCGTC---------------------------------------------------------------GGCTGG---------GCAATTTATCCGCTCGGCTATTTCCTCGGTTACCTG---------------------------------------AACGGTGCTGCTGACGCTGTCACCTTGAACGTTATCTACAACGTCGCTGACGTTGTGAACAAGATCGCGTTCGTTGGTGTGATCTGGGCAGCTGCCAACGCAGAA---GCCGCGAAAGCC--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------LDHIDGHDGGRNLLLMEAGRLPG-KWKTAMTIGALVQIVAAVHYFYMRDVWV----------ST-------GETPTVYRYVDW--------LITVPLQMVEFYFILAA---V-AVVSA-GM------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-S-TM-RMIVTV---------------------GW---AIYPLGYFLGYL-------------NGAADAVTLNVIYNVADVVNKIAFVGVIWAAANAE-AAKA------------------------------------- [IV-Proteo4-BAC17H08]_EF100191 [IV-Proteo4-BAC17H08] HF10_25F10_genomic_EF100191 gi|119094166|gb|EF100191| Uncultured marine bacterium HF10 25F10 genomic sequence Uncultured marine bacterium HF10 25F10 genomic sequence EF100191 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:413068 genomic_DNA other 02APR2008 #na North_Pacific_Subtropical_Gyre/Hawaii_Ocean_Time_Series_Station_ALOHA/10m_below_sea_surface Pacific Ocean marine 22.75 -158 Proteorhodopsin photosystem gene expression enables photophosphorylation in a heterologous host Martinez,A., Bradley,A.S., Waldbauer,J.R., Summons,R.E. and Delong,E.F. Proc. Natl. Acad. Sci. U.S.A. 104 (13), 55905595 (2007) 17372221 #na ATGAAACTCTCAATGGGTAAGGTGATGAAGACTGCGATGATCGCAGGCGGACTCGCCACTCTCCCAACTGTCGCAAACGCTGCTACGGCGATGCTTGCTGCAACTGACTATGTAGGCATCTCGTTCTGGACCATTTCGATGGCCATGATGGCAGCCGCAATCTTCTTCCTGATGGAAGCAGGTCGCCTGCCTGGCAAGTGGAAGACCGCAATGACGATTGGTGCACTCGTGCAGATCGTTGCAGCGGTACACTATTTCTACATGCGCGACGTATGGGTCAGCACTGGTGAAACGCCAACCGTTTACAGGTATGTTGACTGGTTGATCACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCAGCGGTGGCCGTTGTTAGCGCTGGTATGTTCTGGCGCTTGATGATCGGTTCGCTGGTAATGCTGGTTGCTGGTTACCTTGGTGAAGCAGGCCTTGTGAATGCATGGCTCGGTTTTGTCGTAGGTATGGCCGGATGGGCATACATCCTCTACGAGATCTTTGCTGGTGAAGCTGGCAAGGTGTCCGCAGAGTCCGCGCCGGAGGCTGTTCAGAAGTCGTTCAGCACGATGCGTATGATCGTGACCGTCGGCTGGGCAATTTATCCGCTCGGCTACTTCCTCGGTTACCTGAACGGTGCTGCTGACGCTGTCACCTTGAACGTTATCTACAACGTCGCTGACGTTGTAAACAAGATCGCGTTCGTTGGTGTGATCTGGGCAGCTGCCAACGCAGAAGCCGCGAAAGCC MKLSMGKVMKTAMIAGGLATLPTVANAATAMLAATDYVGISFWTISMAMMAAAIFFLMEAGRLPGKWKTAMTIGALVQIVAAVHYFYMRDVWVSTGETPTVYRYVDWLITVPLQMVEFYFILAAVAVVSAGMFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFSTMRMIVTVGWAIYPLGYFLGYLNGAADAVTLNVIYNVADVVNKIAFVGVIWAAANAEAAKA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAACTCTCAATGGGTAAGGTGATGAAGACTGCGATGATCGCAGGCGGACTCGCCACTCTCCCAACTGTCGCAAACGCTGCTACGGCGATGCTTGCTGCAACTGACTATGTAGGCATCTCGTTCTGGACCATTTCGATGGCCATGATGGCAGCCGCAATCTTCTTCCTGATGGAAGCAGGTCGCCTGCCTGGC---AAGTGGAAGACCGCAATGACGATTGGTGCACTCGTGCAGATCGTTGCAGCGGTACACTATTTCTACATGCGCGACGTATGGGTC------------------------------AGCACT---------------------GGTGAAACGCCAACCGTTTACAGGTATGTTGACTGG------------------------TTGATCACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCAGCG---------GTG---GCCGTTGTTAGCGCT---GGTATG------------------------------------TTCTGGCGC---TTGATGATCGGTTCGCTGGTAATGCTGGTTGCTGGTTACCTTGGTGAA---------GCA------------------GGC------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGT---TTTGTCGTAGGTATGGCCGGATGGGCATACATCCTCTACGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTGTCCGCAGAG------TCC---GCGCCGGAGGCTGTT---CAG---AAG---TCG---TTC---AGC---ACGATG---CGTATGATCGTGACCGTC---------------------------------------------------------------GGCTGG---------GCAATTTATCCGCTCGGCTACTTCCTCGGTTACCTG---------------------------------------AACGGTGCTGCTGACGCTGTCACCTTGAACGTTATCTACAACGTCGCTGACGTTGTAAACAAGATCGCGTTCGTTGGTGTGATCTGGGCAGCTGCCAACGCAGAA---GCCGCGAAAGCC--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------MKLSMGKVMKTAMIAGGLATLPTVANAATAMLAATDYVGISFWTISMAMMAAAIFFLMEAGRLPG-KWKTAMTIGALVQIVAAVHYFYMRDVWV----------ST-------GETPTVYRYVDW--------LITVPLQMVEFYFILAA---V-AVVSA-GM------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-S-TM-RMIVTV---------------------GW---AIYPLGYFLGYL-------------NGAADAVTLNVIYNVADVVNKIAFVGVIWAAANAE-AAKA------------------------------------- [IV-Proteo4-BAC17H08]_1112689025679 [IV-Proteo4-BAC17H08] JCVI_ORF_1112689025679_GS114_Open_Ocean_2m jcvi|1112689025679| 1112689025679 JCVI ORF 1112689025679 1112689025679 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 15-AUG-2005 Open_Ocean/2m_depth/S_33.1_psu/GS114/500_Miles_west_of_the_Seychelles_in_the_Indian_Ocean/Indian_Ocean Indian Ocean marine -4.990278 64.97667 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf AAACTCTCAATGGGTAAGGTGATGAAGACTGCGATGATCGCAGGCGGACTTGCCGCTCTCCCAACTGTCGCAAACGCTGCTACGGCGATGCTTGCTGCAACTGACTATGTAGGCATCTCGTTCTGGACCATTTCGATGGCCATGATGGCGGCCGCAATCTTCTTCCTGATGGAAGCAGGTCGCCTGCCTGGCAAGTGGAAGACCGCAATGACAATTGGTGCACTCGTGCAGATCGTTGCAGCGGTACACTATTTCTACATGCGCGACGTATGGGTCAGCACTGGTGAAACGCCAACCGTTTACAGGTATGTTGACTGGTTGATCACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCGGTGGCCGTTGTTAGCGCTGGTATGTTCTGGCGCTTGATGATCGGTTCGCTAGTAATGCTGGTTGCTGGTTACCTTGGTGAAGCAGGGCTTGTGAATGCATGGCTCGGCTTTGTCGTAGGTATGGCAGGATGGGCATACATCCTCTACGAGATCTTTGCTGGTGAAGCTGGCAAGGTGTCCGCAGAGTCGGCGCCGGAGGCTGTTCAGAAGTCGTTCAGCACGATGCGTATGATCGTGACCGTCGGCTGGGCAATTTATCCGCTCGGCTATTTCCTCGGTTACCTGAACGGTGCTGCTGACGCTGTCACCTTGAACGTTATCTACAACGTCGCTGACGTTGTGAACAAGATCGCGTTCGTTGGTGTGATCTGGGCAGCTGCCAACGCAGAAGCCGCGAAAGCC KLSMGKVMKTAMIAGGLAALPTVANAATAMLAATDYVGISFWTISMAMMAAAIFFLMEAGRLPGKWKTAMTIGALVQIVAAVHYFYMRDVWVSTGETPTVYRYVDWLITVPLQMVEFYFILAAVAVVSAGMFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFSTMRMIVTVGWAIYPLGYFLGYLNGAADAVTLNVIYNVADVVNKIAFVGVIWAAANAEAAKA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACTCTCAATGGGTAAGGTGATGAAGACTGCGATGATCGCAGGCGGACTTGCCGCTCTCCCAACTGTCGCAAACGCTGCTACGGCGATGCTTGCTGCAACTGACTATGTAGGCATCTCGTTCTGGACCATTTCGATGGCCATGATGGCGGCCGCAATCTTCTTCCTGATGGAAGCAGGTCGCCTGCCTGGC---AAGTGGAAGACCGCAATGACAATTGGTGCACTCGTGCAGATCGTTGCAGCGGTACACTATTTCTACATGCGCGACGTATGGGTC------------------------------AGCACT---------------------GGTGAAACGCCAACCGTTTACAGGTATGTTGACTGG------------------------TTGATCACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCG---------GTG---GCCGTTGTTAGCGCT---GGTATG------------------------------------TTCTGGCGC---TTGATGATCGGTTCGCTAGTAATGCTGGTTGCTGGTTACCTTGGTGAA---------GCA------------------GGG------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTCGTAGGTATGGCAGGATGGGCATACATCCTCTACGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTGTCCGCAGAG------TCG---GCGCCGGAGGCTGTT---CAG---AAG---TCG---TTC---AGC---ACGATG---CGTATGATCGTGACCGTC---------------------------------------------------------------GGCTGG---------GCAATTTATCCGCTCGGCTATTTCCTCGGTTACCTG---------------------------------------AACGGTGCTGCTGACGCTGTCACCTTGAACGTTATCTACAACGTCGCTGACGTTGTGAACAAGATCGCGTTCGTTGGTGTGATCTGGGCAGCTGCCAACGCAGAA---GCCGCGAAAGCC--------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------KLSMGKVMKTAMIAGGLAALPTVANAATAMLAATDYVGISFWTISMAMMAAAIFFLMEAGRLPG-KWKTAMTIGALVQIVAAVHYFYMRDVWV----------ST-------GETPTVYRYVDW--------LITVPLQMVEFYFILAA---V-AVVSA-GM------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-S-TM-RMIVTV---------------------GW---AIYPLGYFLGYL-------------NGAADAVTLNVIYNVADVVNKIAFVGVIWAAANAE-AAKA------------------------------------- [IV-Proteo4-BAC17H08]_1105135309735 [IV-Proteo4-BAC17H08] JCVI_ORF_1105135309735 jcvi|1105135309735| 1105135309735 JCVI ORF 1105135309735 1105135309735 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 17-mars-04 Open_Ocean/2m_depth/S_n.a/GS037/Equatorial_Pacific_TAO_Buoy/Eastern_Tropical_Pacific Pacific Ocean marine -1.9738889 -95.014725 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGGCAGCTGCTATCTTCTTCCTGATGGAAGCTGGTCGCCTGCCCGGCAAGTGGAAGACTGCAATGACGATCGGTGCACTCGTTCAGATCGTTGCCGCGGTGCACTACTTCTACATGCGCGATGTTTGGGTCAGCACTGGTGAAACACCAACTGTCTATAGGTATGTTGACTGGTTAATCACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCTTGGCGGCAGTGGCGGTTGTTACCGCTGGTATGTTCTGGCGCTTGATGATCGGTTCGCTGGTAATGCTGGTTGCTGGTTACCTTGGTGAAGCAGGCCTCGTGAATGCATGGCTTGGCTTTGTCGTAGGCATGGCCGGATGGGCTTACATACTCTACGAAATCTTTGCTGGTGAAGCTGGCAAGGTGTCGGCAGAGTCCGCGCCGGAGGCTGTTCAGAAGTCGTTCAGCACGATGCGTATGATCGTGACCGTAGGCTGGGCAATCTACCCGCTCGGCTATTTCCTCGGTTACCTCAACGGTGCTGCTGACGCTGTCACCTTGAACGTTATCTACAACGTCGCTGACGTAGTGAACAAGATTGCGTTCGTTGGTGTGATCTGGGCAGCTGCCAACGCAGAAGCCGCGAAAGCC MAAAIFFLMEAGRLPGKWKTAMTIGALVQIVAAVHYFYMRDVWVSTGETPTVYRYVDWLITVPLQMVEFYFILAAVAVVTAGMFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFSTMRMIVTVGWAIYPLGYFLGYLNGAADAVTLNVIYNVADVVNKIAFVGVIWAAANAEAAKA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGCAGCTGCTATCTTCTTCCTGATGGAAGCTGGTCGCCTGCCCGGC---AAGTGGAAGACTGCAATGACGATCGGTGCACTCGTTCAGATCGTTGCCGCGGTGCACTACTTCTACATGCGCGATGTTTGGGTC------------------------------AGCACT---------------------GGTGAAACACCAACTGTCTATAGGTATGTTGACTGG------------------------TTAATCACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCTTGGCGGCA---------GTG---GCGGTTGTTACCGCT---GGTATG------------------------------------TTCTGGCGC---TTGATGATCGGTTCGCTGGTAATGCTGGTTGCTGGTTACCTTGGTGAA---------GCA------------------GGC------CTC---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTTGGC---TTTGTCGTAGGCATGGCCGGATGGGCTTACATACTCTACGAAATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTGTCGGCAGAG------TCC---GCGCCGGAGGCTGTT---CAG---AAG---TCG---TTC---AGC---ACGATG---CGTATGATCGTGACCGTA---------------------------------------------------------------GGCTGG---------GCAATCTACCCGCTCGGCTATTTCCTCGGTTACCTC---------------------------------------AACGGTGCTGCTGACGCTGTCACCTTGAACGTTATCTACAACGTCGCTGACGTAGTGAACAAGATTGCGTTCGTTGGTGTGATCTGGGCAGCTGCCAACGCAGAA---GCCGCGAAAGCC--------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MAAAIFFLMEAGRLPG-KWKTAMTIGALVQIVAAVHYFYMRDVWV----------ST-------GETPTVYRYVDW--------LITVPLQMVEFYFILAA---V-AVVTA-GM------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-S-TM-RMIVTV---------------------GW---AIYPLGYFLGYL-------------NGAADAVTLNVIYNVADVVNKIAFVGVIWAAANAE-AAKA------------------------------------- [IV-Proteo4-BAC17H08]_EU079157 [IV-Proteo4-BAC17H08] NASB_77_env_samples_EU079157 gi|156106474|gb|EU079157| Uncultured organism clone NASB 77 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 77 putative proteorhodopsin gene, partial cds EU079157 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGTTATGTAGACTGGCTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCAGCGGTGGCGGTAGTTAGCGCTGGTATGTTCTGGCGCTTGATGATCGGTTCGCTTGTAATGCTGGTTGCTGGTTACCTTGGTGAAGCAGGCCTTGTCAATGCATGGCTCGGCTTTGTTGTAGGTATGGCCGGATGGGCATACATCCTCTACGAGATCTTTGCTGGTGAAGCTGGCAAGGTGTCCGCAGAGTCCGCGCCGGAGGCTGTTCAGAAGTCGTTCAGCACGATGCGTATGATTGTGACCGTCGGCTGGGCTATATAC RYVDWLITVPLQMVEFYFILAAVAVVSAGMFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFSTMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTATGTAGACTGG------------------------CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCAGCG---------GTG---GCGGTAGTTAGCGCT---GGTATG------------------------------------TTCTGGCGC---TTGATGATCGGTTCGCTTGTAATGCTGGTTGCTGGTTACCTTGGTGAA---------GCA------------------GGC------CTT---------------------------------GTC------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTTGTAGGTATGGCCGGATGGGCATACATCCTCTACGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTGTCCGCAGAG------TCC---GCGCCGGAGGCTGTT---CAG---AAG---TCG---TTC---AGC---ACGATG---CGTATGATTGTGACCGTC---------------------------------------------------------------GGCTGG---------GCTATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LITVPLQMVEFYFILAA---V-AVVSA-GM------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-S-TM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_1112700930897 [IV-Proteo4-BAC17H08] JCVI_ORF_1112700930897 jcvi|1112700930897| 1112700930897 JCVI ORF 1112700930897 1112700930897 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 09-AUG-2005 Open_Ocean/2m_depth/S_33.3_psu/GS113/Indian_Ocean/Indian_Ocean Indian Ocean marine -7.0075 76.33139 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TCGCCTGCCTGGCAGTGGAAGACCGCAATGACGATCGGTGCACTCGTACAGATCGTGGCAGCGGTGCACTACTTCTACATGCGCGACGTCTGGGTCAGCACCGGCGAAACGCCGACTGTCTATAGATATGTAGATTGGCTGATTACTGTTCCGCTGCAGATGGTAGAATTCTACTTCATCCTAGCGGCAGTAGCGGTTGTTAGCGCTGGTATGTTCTGGCGCCTGATGATCGGCTCGCTGGTAATGCTGGTTGCTGGTTACCTGGGCGAAGCTGGCCTTGTGAATGCATGGCTTGGCTTTATCGTTGGCTTGGCTGGATGGGCATACATCCTTTACGAGATCTTCGCTGGTGAAGCTGGCAAGGTATCTGCGGAATCCGCTCCGGAAGCTGTCCAAAAGTCATTCGGTACTATGCGTCTGATCGTGACCGTCGGCTGGGCAATCTATCCGCTTGGCTATTTCCTCGGCTACCTGAACGGTGCTGCTGATGCAGTTACACTGAACGTTATTTACAACGTCGCTGACGTTGTGAACAAGATCGCGTTCGTTGGTGTGATCTGGGCAGCTGCCAATGCAGAAACCGCGAAAGCC SPAWQWKTAMTIGALVQIVAAVHYFYMRDVWVSTGETPTVYRYVDWLITVPLQMVEFYFILAAVAVVSAGMFWRLMIGSLVMLVAGYLGEAGLVNAWLGFIVGLAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRLIVTVGWAIYPLGYFLGYLNGAADAVTLNVIYNVADVVNKIAFVGVIWAAANAETAKA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGCCTGCCTGGCAGTGGAAGACCGCAATGACGATCGGTGCACTCGTACAGATCGTGGCAGCGGTGCACTACTTCTACATGCGCGACGTCTGGGTC------------------------------AGCACC---------------------GGCGAAACGCCGACTGTCTATAGATATGTAGATTGG------------------------CTGATTACTGTTCCGCTGCAGATGGTAGAATTCTACTTCATCCTAGCGGCA---------GTA---GCGGTTGTTAGCGCT---GGTATG------------------------------------TTCTGGCGC---CTGATGATCGGCTCGCTGGTAATGCTGGTTGCTGGTTACCTGGGCGAA---------GCT------------------GGC------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTTGGC---TTTATCGTTGGCTTGGCTGGATGGGCATACATCCTTTACGAGATC---------------TTC------GCT---GGTGAAGCTGGCAAGGTATCTGCGGAA------TCC---GCTCCGGAAGCTGTC---CAA---AAG---TCA---TTC---GGT---ACTATG---CGTCTGATCGTGACCGTC---------------------------------------------------------------GGCTGG---------GCAATCTATCCGCTTGGCTATTTCCTCGGCTACCTG---------------------------------------AACGGTGCTGCTGATGCAGTTACACTGAACGTTATTTACAACGTCGCTGACGTTGTGAACAAGATCGCGTTCGTTGGTGTGATCTGGGCAGCTGCCAATGCAGAA---ACCGCGAAAGCC--------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------SPAWQWKTAMTIGALVQIVAAVHYFYMRDVWV----------ST-------GETPTVYRYVDW--------LITVPLQMVEFYFILAA---V-AVVSA-GM------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FIVGLAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RLIVTV---------------------GW---AIYPLGYFLGYL-------------NGAADAVTLNVIYNVADVVNKIAFVGVIWAAANAE-TAKA------------------------------------- [IV-Proteo4-BAC17H08]_1112690047549 [IV-Proteo4-BAC17H08] JCVI_ORF_1112690047549 jcvi|1112690047549| 1112690047549 JCVI ORF 1112690047549 1112690047549 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 15-AUG-2005 Open_Ocean/2m_depth/S_33.1_psu/GS114/500_Miles_west_of_the_Seychelles_in_the_Indian_Ocean/Indian_Ocean Indian Ocean marine -4.990278 64.97667 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf GGTCGCCTGCCTGGCAAGTGGAAGACCGCAATGACGATCGGTGCACTCGTGCAGATCGTGGCCGCGGTGCACTACTTCTACATGCGCGACGTTTGGGTCAGCACCGGTGAAACACCGACTGTCTACCGCTATGTCGACTGGCTGATCACTGTTCCGCTTCAGATGGTAGAATTCTACTTCATCCTGGCGGCTGTGGCTGTTGTCAGCGCCGGCATCTTCTGGCGTCTGATGATCGGTTCGTTGGTCATGCTGGTTGCCGGTTATCTCGGCGAGGCAGGCCTTGTGAATGCATGGCTCGGCTTTGTCGTGGGCATGGCCGGATGGGCATACATCCTGTACGAGATCTTCGCTGGTGAAGCCGGCAAGGTGTCTGCAGAGTCCGCTCCGGAGGCTGTCCAGAAGTCGTTCGGCACGATGCGTATGATCGTGACCGTCGGCTGGGCGATCTATCCGCTCGGCTACTTCCTTGGTTACCTGAACGGTGCTGCTGACGCAGTTACCCTGAACGTCATCTACAACGTCGCCGACGTTGTGAACAAGATCGCGTTCGTAGGTGTCATCTGGGCTGCTGCCAACGCAGAAGCCTCGAAGGCA GRLPGKWKTAMTIGALVQIVAAVHYFYMRDVWVSTGETPTVYRYVDWLITVPLQMVEFYFILAAVAVVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRMIVTVGWAIYPLGYFLGYLNGAADAVTLNVIYNVADVVNKIAFVGVIWAAANAEASKA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCGCCTGCCTGGC---AAGTGGAAGACCGCAATGACGATCGGTGCACTCGTGCAGATCGTGGCCGCGGTGCACTACTTCTACATGCGCGACGTTTGGGTC------------------------------AGCACC---------------------GGTGAAACACCGACTGTCTACCGCTATGTCGACTGG------------------------CTGATCACTGTTCCGCTTCAGATGGTAGAATTCTACTTCATCCTGGCGGCT---------GTG---GCTGTTGTCAGCGCC---GGCATC------------------------------------TTCTGGCGT---CTGATGATCGGTTCGTTGGTCATGCTGGTTGCCGGTTATCTCGGCGAG---------GCA------------------GGC------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTCGTGGGCATGGCCGGATGGGCATACATCCTGTACGAGATC---------------TTC------GCT---GGTGAAGCCGGCAAGGTGTCTGCAGAG------TCC---GCTCCGGAGGCTGTC---CAG---AAG---TCG---TTC---GGC---ACGATG---CGTATGATCGTGACCGTC---------------------------------------------------------------GGCTGG---------GCGATCTATCCGCTCGGCTACTTCCTTGGTTACCTG---------------------------------------AACGGTGCTGCTGACGCAGTTACCCTGAACGTCATCTACAACGTCGCCGACGTTGTGAACAAGATCGCGTTCGTAGGTGTCATCTGGGCTGCTGCCAACGCAGAA---GCCTCGAAGGCA--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------GRLPG-KWKTAMTIGALVQIVAAVHYFYMRDVWV----------ST-------GETPTVYRYVDW--------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RMIVTV---------------------GW---AIYPLGYFLGYL-------------NGAADAVTLNVIYNVADVVNKIAFVGVIWAAANAE-ASKA------------------------------------- [IV-Proteo4-BAC17H08]_DQ068068 [IV-Proteo4-BAC17H08] BAC17H8_complete_DQ068068 gi|68164473|gb|DQ068068| Uncultured bacterium BAC17H8, complete sequence Uncultured bacterium BAC17H8, complete sequence DQ068068 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:332980 genomic_DNA other 11-juil-05 May 2002 7_m_coastal_water_from_the_Red_Sea/from_the_dock_at_the_Interuniversity_Institute_for_Marine_Science_in_Eilat Red Sea marine 29.5 34.92 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na ATGGGTACGGCACTGAAAGCCTCGCTGGTTGCAGCTGGGCTCGCCACTCTCCCATCCGTTGCAAACGCTGCGACGACGATGCTTGCTGCTACAGATTATGTAGGCATCTCGTTCTGGACCATTTCGATGGCCATGATGGCAGCTGCGATCTTCTTCCTTATGGAAGCCGGTCGTCTGCCGGGCAAGTGGAAGACAGCCATGACGATTGGTGCACTCGTGCAGATCGTTGCCGCTGTGCACTATTTCTACATGCGCGACGTGTGGGTCACCACCGGTGATACGCCGACAGTTTACAGGTATGTCGACTGGCTGATCACCGTTCCGCTTCAAATGGTGGAATTCTACTTCATCCTGGCGGCAGTCGCCGCAGTCAGCGCCGGCATCTTCTGGCGTCTGATGATCGGCTCGCTGGTCATGCTTGTGGCTGGTTACCTCGGTGAGGCAGGCCTTGTGAATGCATGGCTCGGCTTCGTCGTCGGTATGGCAGGATGGGCTTACATTCTGTACGAAATCTTCGCTGGTGAAGCTGGCAAGGTATCTGCCGAATCCGCGCCCGAGGCGGTGCAAAAGTCCTTCGGTACGATGCGTATGATCGTGACCGTGGGTTGGGCGATCTATCCGCTCGGCTACTTCCTTGGTTACCTGAACGGTGCTGCTGATGCAGTTACCCTGAACGTTATCTACAACGTCGCCGACGTTGTGAACAAGATCGCGTTCGTCGGTGTGATCTGGGCAGCCGCAAACGCGGAAGCTTCCAAAGCC MGTALKASLVAAGLATLPSVANAATTMLAATDYVGISFWTISMAMMAAAIFFLMEAGRLPGKWKTAMTIGALVQIVAAVHYFYMRDVWVTTGDTPTVYRYVDWLITVPLQMVEFYFILAAVAAVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRMIVTVGWAIYPLGYFLGYLNGAADAVTLNVIYNVADVVNKIAFVGVIWAAANAEASKA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTACGGCACTGAAAGCCTCGCTGGTTGCAGCTGGGCTCGCCACTCTCCCATCCGTTGCAAACGCTGCGACGACGATGCTTGCTGCTACAGATTATGTAGGCATCTCGTTCTGGACCATTTCGATGGCCATGATGGCAGCTGCGATCTTCTTCCTTATGGAAGCCGGTCGTCTGCCGGGC---AAGTGGAAGACAGCCATGACGATTGGTGCACTCGTGCAGATCGTTGCCGCTGTGCACTATTTCTACATGCGCGACGTGTGGGTC------------------------------ACCACC---------------------GGTGATACGCCGACAGTTTACAGGTATGTCGACTGG------------------------CTGATCACCGTTCCGCTTCAAATGGTGGAATTCTACTTCATCCTGGCGGCA---------GTC---GCCGCAGTCAGCGCC---GGCATC------------------------------------TTCTGGCGT---CTGATGATCGGCTCGCTGGTCATGCTTGTGGCTGGTTACCTCGGTGAG---------GCA------------------GGC------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTCGTCGTCGGTATGGCAGGATGGGCTTACATTCTGTACGAAATC---------------TTC------GCT---GGTGAAGCTGGCAAGGTATCTGCCGAA------TCC---GCGCCCGAGGCGGTG---CAA---AAG---TCC---TTC---GGT---ACGATG---CGTATGATCGTGACCGTG---------------------------------------------------------------GGTTGG---------GCGATCTATCCGCTCGGCTACTTCCTTGGTTACCTG---------------------------------------AACGGTGCTGCTGATGCAGTTACCCTGAACGTTATCTACAACGTCGCCGACGTTGTGAACAAGATCGCGTTCGTCGGTGTGATCTGGGCAGCCGCAAACGCGGAA---GCTTCCAAAGCC--------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------MGTALKASLVAAGLATLPSVANAATTMLAATDYVGISFWTISMAMMAAAIFFLMEAGRLPG-KWKTAMTIGALVQIVAAVHYFYMRDVWV----------TT-------GDTPTVYRYVDW--------LITVPLQMVEFYFILAA---V-AAVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RMIVTV---------------------GW---AIYPLGYFLGYL-------------NGAADAVTLNVIYNVADVVNKIAFVGVIWAAANAE-ASKA------------------------------------- [IV-Proteo4-BAC17H08]_DQ062292 [IV-Proteo4-BAC17H08] REDPR17H08_env_samples_DQ062292 gi|67483529|gb|DQ062292| Uncultured bacterium clone REDPR17H08 proteorhodopsin gene, partial cds Uncultured bacterium clone REDPR17H08 proteorhodopsin gene, partial cds DQ062292 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 May 2002 7_m_coastal_water_from_the_Red_Sea/from_the_dock_at_the_Interuniversity_Institute_for_Matine_Science_in_Eilat Red Sea marine 29.5 34.92 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na AGGTATGTCGACTGGCTGATCACCGTTCCGCTTCAAATGGTGGAATTCTACTTCATCCTGGCGGCAGTCGCCGCAGTCAGCGCCGGCATCTTCTGGCGTCTGATGATCGGCTCGCTGGTCATGCTTGTGGCTGGTTACCTCGGTGAGGCAGGCCTTGTGAATGCATGGCTCGGCTTCGTCGTCGGTATGGCAGGATGGGCTTACATTCTGTACGAAATCTTCGCTGGTGAAGCTGGCAAGGTATCTGCCGAATCCGCGCCCGAGGCGGTGCAAAAGTCCTTCGGTACGATGCGTATGATCGTGACCGTGGGTTGGGCGATCTATCCG RYVDWLITVPLQMVEFYFILAAVAAVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTATGTCGACTGG------------------------CTGATCACCGTTCCGCTTCAAATGGTGGAATTCTACTTCATCCTGGCGGCA---------GTC---GCCGCAGTCAGCGCC---GGCATC------------------------------------TTCTGGCGT---CTGATGATCGGCTCGCTGGTCATGCTTGTGGCTGGTTACCTCGGTGAG---------GCA------------------GGC------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTCGTCGTCGGTATGGCAGGATGGGCTTACATTCTGTACGAAATC---------------TTC------GCT---GGTGAAGCTGGCAAGGTATCTGCCGAA------TCC---GCGCCCGAGGCGGTG---CAA---AAG---TCC---TTC---GGT---ACGATG---CGTATGATCGTGACCGTG---------------------------------------------------------------GGTTGG---------GCGATCTATCCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LITVPLQMVEFYFILAA---V-AAVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_1105159759200 [IV-Proteo4-BAC17H08] JCVI_ORF_1105159759200_GS051_Coral_Reef_Atoll_1m jcvi|1105159759200| 1105159759200 JCVI ORF 1105159759200 1105159759200 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 22-MAY-2004 Coral_Reef_Atoll/1m_depth/S_34.2_psu/GS051/Rangirora_Atoll/Polynesia_Archipelagos Pacific Ocean marine -15.143611 -147.435 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TTGCGCGGCGACGCTTTGTCTCAATACTGTGGAGTGGATACGGGTGGGTCATATTGTCGCGAAGACAGGCTGATTCGTCCGTGCCTTTTCGTTAACGGAGGTAAAACAATGAAAGTCTCAATGGGTACGGCACTGAAAGCCTCGCTGGTTGCAGCTGGGCTCGCCACTCTCCCATCCGTTGCAAACGCTGCGACGACGATGCTTGCCGCTACAGACTATGTAGGCATCTCGTTCTGGACCATTTCGATGGCCATGATGGCAGCCGCGATCTTCTTCCTGATGGAAGCCGGTCGTCTGCCGGGTAAGTGGAAGACAGCCATGACGATCGGTGCACTCGTGCAGATCGTTGCCGCTGTGCACTACTTCTACATGCGCGACGTGTGGGTCACCACCGGTGATACGCCGACAGTCTACAGGTATGTCGACTGGCTGATCACCGTTCCGCTTCAAATGGTGGAATTCTACTTCATCCTGGCGGCAGTCGCCGCAGTCAGCGCCGGCATCTTCTGGCGTCTGATGATCGGCTCGCTGGTCATGCTTGTGGCTGGTTACCTCGGTGAGGCAGGCCTTGTGAATGCATGGCTCGGCTTCGTCGTCGGTATGGCAGGATGGGCGTACATTCTGTACGAGATCTTCGCTGGTGAAGCCGGCAAGGTATCTGCCGAAGCTGCGCCCGAGGCGGTGCAGAAGTCCTTCGGTACGATGCGTATGATCGTGACCGTTGGTTGGGCGATCTATCCGCTCGGCTACTTCCTTGGTTACCTGAACGGTGCTGCTGACGCAGTTACCCTGAACGTTATCTACAACGTCGCCGACGTTGTGAACAAGATCGCGTTCGTCGGTGTGATCTGGGCAGCCGCAAACGCGGAAGCTTCCAAAGCCTACGCA LRGDALSQYCGVDTGGSYCREDRLIRPCLFVNGGKTMKVSMGTALKASLVAAGLATLPSVANAATTMLAATDYVGISFWTISMAMMAAAIFFLMEAGRLPGKWKTAMTIGALVQIVAAVHYFYMRDVWVTTGDTPTVYRYVDWLITVPLQMVEFYFILAAVAAVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAEAAPEAVQKSFGTMRMIVTVGWAIYPLGYFLGYLNGAADAVTLNVIYNVADVVNKIAFVGVIWAAANAEASKAYA ------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCGCGGCGACGCTTTGTCTCAATACTGTGGAGTGGATACGGGTGGGTCATATTGTCGCGAAGACAGGCTGATTCGTCCGTGCCTTTTCGTTAACGGAGGTAAAACAATGAAAGTCTCAATGGGTACGGCACTGAAAGCCTCGCTGGTTGCAGCTGGGCTCGCCACTCTCCCATCCGTTGCAAACGCTGCGACGACGATGCTTGCCGCTACAGACTATGTAGGCATCTCGTTCTGGACCATTTCGATGGCCATGATGGCAGCCGCGATCTTCTTCCTGATGGAAGCCGGTCGTCTGCCGGGT---AAGTGGAAGACAGCCATGACGATCGGTGCACTCGTGCAGATCGTTGCCGCTGTGCACTACTTCTACATGCGCGACGTGTGGGTC------------------------------ACCACC---------------------GGTGATACGCCGACAGTCTACAGGTATGTCGACTGG------------------------CTGATCACCGTTCCGCTTCAAATGGTGGAATTCTACTTCATCCTGGCGGCA---------GTC---GCCGCAGTCAGCGCC---GGCATC------------------------------------TTCTGGCGT---CTGATGATCGGCTCGCTGGTCATGCTTGTGGCTGGTTACCTCGGTGAG---------GCA------------------GGC------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTCGTCGTCGGTATGGCAGGATGGGCGTACATTCTGTACGAGATC---------------TTC------GCT---GGTGAAGCCGGCAAGGTATCTGCCGAA------GCT---GCGCCCGAGGCGGTG---CAG---AAG---TCC---TTC---GGT---ACGATG---CGTATGATCGTGACCGTT---------------------------------------------------------------GGTTGG---------GCGATCTATCCGCTCGGCTACTTCCTTGGTTACCTG---------------------------------------AACGGTGCTGCTGACGCAGTTACCCTGAACGTTATCTACAACGTCGCCGACGTTGTGAACAAGATCGCGTTCGTCGGTGTGATCTGGGCAGCCGCAAACGCGGAA---GCTTCCAAAGCCTACGCA--------------------------------------------------------------------------------------------------------- ----------------------------------------------------LRGDALSQYCGVDTGGSYCREDRLIRPCLFVNGGKTMKVSMGTALKASLVAAGLATLPSVANAATTMLAATDYVGISFWTISMAMMAAAIFFLMEAGRLPG-KWKTAMTIGALVQIVAAVHYFYMRDVWV----------TT-------GDTPTVYRYVDW--------LITVPLQMVEFYFILAA---V-AAVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--A-APEAV-Q-K-S-F-G-TM-RMIVTV---------------------GW---AIYPLGYFLGYL-------------NGAADAVTLNVIYNVADVVNKIAFVGVIWAAANAE-ASKAYA----------------------------------- [IV-Proteo4-BAC17H08]_KJ926113 [IV-Proteo4-BAC17H08] BOUM_OTU026_env_samples gb|KJ926113| Uncultured bacterium clone BOUM OTU026 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU026 putative proteorhodopsin gene, partial cds KJ926113 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 39.0995 5.3403333 #na #na #na #na #na GTTGACTGGCTAATAACCGTGCCTCTCCAAATGGTTGAATTCTACTTCATTCTAGCGGCAGTCGCAGTTGTCAGCGCTGGCATTTTTTGGCGCCTGATGATTGGGTCGCTGGTAATGCTTGTCGCTGGTTACCTCGGCGAAGCAGGTCTCGTGAACGCTTGGCTTGGCTTTGTCGTTGGCATGGCGGGATGGGCATACATCTTGTATGAGATTTTTGCCGGTGAAGCAGGAAGGGTATCTGCGGAGTCCGCTCCGGAGGCCGTCCAGAAGTCTTTCGGTACGATGCGGTTAATCGTTACCGTTGGCTGGGCGATTTAT VDWLITVPLQMVEFYFILAAVAVVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGRVSAESAPEAVQKSFGTMRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGACTGG------------------------CTAATAACCGTGCCTCTCCAAATGGTTGAATTCTACTTCATTCTAGCGGCA---------GTC---GCAGTTGTCAGCGCT---GGCATT------------------------------------TTTTGGCGC---CTGATGATTGGGTCGCTGGTAATGCTTGTCGCTGGTTACCTCGGCGAA---------GCA------------------GGT------CTC---------------------------------GTG------------------------------------------------------------------AACGCT------------------TGGCTTGGC---TTTGTCGTTGGCATGGCGGGATGGGCATACATCTTGTATGAGATT---------------TTT------GCC---GGTGAAGCAGGAAGGGTATCTGCGGAG------TCC---GCTCCGGAGGCCGTC---CAG---AAG---TCT---TTC---GGT---ACGATG---CGGTTAATCGTTACCGTT---------------------------------------------------------------GGCTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGRVSAE--S-APEAV-Q-K-S-F-G-TM-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_EU079156 [IV-Proteo4-BAC17H08] NASB_47_env_samples_EU079156 gi|156106472|gb|EU079156| Uncultured organism clone NASB 47 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 47 putative proteorhodopsin gene, partial cds EU079156 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGTTACATAGATTGGCTAATAACCGTGCCTCTCCAAATGGTTGAATTCTACTTCATTCTAGCGGCAGTCGCAGTTGTCAGCGCTGGCATTTTTTGGCGCCTGATGATTGGGTCGCTGGTAATGCTTGTCGCTGGTTACCTCGGCGAAGCAGGTCTCGTGTACGCTTGGCTTGGCTTTGTCGTTGGCATGGCGGGATGGGCATACATCTTGTATGAGATTTTTGCCGGTGAAGCAGGAAGGGTATCTGCGGAGTCCGCTCCGGAGGCCGTCCAGAAGTCTTTCGGTACGATGCGGTTAATCGTTACCGTTGGATGGGCAATATAC RYIDWLITVPLQMVEFYFILAAVAVVSAGIFWRLMIGSLVMLVAGYLGEAGLVYAWLGFVVGMAGWAYILYEIFAGEAGRVSAESAPEAVQKSFGTMRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTACATAGATTGG------------------------CTAATAACCGTGCCTCTCCAAATGGTTGAATTCTACTTCATTCTAGCGGCA---------GTC---GCAGTTGTCAGCGCT---GGCATT------------------------------------TTTTGGCGC---CTGATGATTGGGTCGCTGGTAATGCTTGTCGCTGGTTACCTCGGCGAA---------GCA------------------GGT------CTC---------------------------------GTG------------------------------------------------------------------TACGCT------------------TGGCTTGGC---TTTGTCGTTGGCATGGCGGGATGGGCATACATCTTGTATGAGATT---------------TTT------GCC---GGTGAAGCAGGAAGGGTATCTGCGGAG------TCC---GCTCCGGAGGCCGTC---CAG---AAG---TCT---TTC---GGT---ACGATG---CGGTTAATCGTTACCGTT---------------------------------------------------------------GGATGG---------GCAATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------YA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGRVSAE--S-APEAV-Q-K-S-F-G-TM-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_DQ062246 [IV-Proteo4-BAC17H08] MEDPR6_env_samples_DQ062246 gi|67483437|gb|DQ062246| Uncultured bacterium clone MEDPR6 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR6 proteorhodopsin gene, partial cds DQ062246 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na AGATACATAGACTGGCTGATAACCGTTCCGCTCCAGATGGTTGAATTCTACTTCATCCTGGCTGCAGTGGCCGTTGTCAGCGCCGGCATCTTCTGGCGTCTGATGGTTGGTTCGCTGGTCATGCTGGTCGGCGGTTACCTTGGCGAAGCAGGTCTTGTTAACGCACGGCTTGGCTTCGTGGTCGGCATGGCAGGATGGGCATACATCCTGTACGAGATCTTTGCCGGTGAAGCAGGCAAGGTATCCGCGTCATCCGCTCCGGAGGCAGTCCAGAAGTCGTTTGGCACGATGCGTATGATCGTGACCGTCGGTTGGGCTATTTATCCA RYIDWLITVPLQMVEFYFILAAVAVVSAGIFWRLMVGSLVMLVGGYLGEAGLVNARLGFVVGMAGWAYILYEIFAGEAGKVSASSAPEAVQKSFGTMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATAACCGTTCCGCTCCAGATGGTTGAATTCTACTTCATCCTGGCTGCA---------GTG---GCCGTTGTCAGCGCC---GGCATC------------------------------------TTCTGGCGT---CTGATGGTTGGTTCGCTGGTCATGCTGGTCGGCGGTTACCTTGGCGAA---------GCA------------------GGT------CTT---------------------------------GTT------------------------------------------------------------------AACGCA------------------CGGCTTGGC---TTCGTGGTCGGCATGGCAGGATGGGCATACATCCTGTACGAGATC---------------TTT------GCC---GGTGAAGCAGGCAAGGTATCCGCGTCA------TCC---GCTCCGGAGGCAGTC---CAG---AAG---TCG---TTT---GGC---ACGATG---CGTATGATCGTGACCGTC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMVGSLVMLVGGYLGE---A------G--L-----------V----------------------NA------RLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAS--S-APEAV-Q-K-S-F-G-TM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_DQ062251 [IV-Proteo4-BAC17H08] MEDPR14H1_env_samples_DQ062251 gi|67483447|gb|DQ062251| Uncultured bacterium clone MEDPR14H1 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR14H1 proteorhodopsin gene, partial cds DQ062251 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na AGGTACATAGATTGGCTTATTACTGTTCCACTACAAATGGTTGAATTCTACTTCATCCTTGCTGCTGTTGCAGTTGTGAGTGGTGGCATCTTCTGGCGGCTGCTTATTGGCTCGCTTGTCATGCTGGTAGCTGGTTACGCCGGTGAGGCCGGACTGGTGAATGCTTGGCTTGGTTTTGTTGTCGGAATGGCAGGCTGGTTCTACATTCTGTATGAAATCTTTGCGGGCGAAGCTGGCAAAGCATCAGCAGAGCAGGCTCCGGCGTCGGTGCAGTCAGCGTTCTCAACAATGCGCTGGATCGTGACGATCGGTTGGGCGATTTACCCA RYIDWLITVPLQMVEFYFILAAVAVVSGGIFWRLLIGSLVMLVAGYAGEAGLVNAWLGFVVGMAGWFYILYEIFAGEAGKASAEQAPASVQSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATAGATTGG------------------------CTTATTACTGTTCCACTACAAATGGTTGAATTCTACTTCATCCTTGCTGCT---------GTT---GCAGTTGTGAGTGGT---GGCATC------------------------------------TTCTGGCGG---CTGCTTATTGGCTCGCTTGTCATGCTGGTAGCTGGTTACGCCGGTGAG---------GCC------------------GGA------CTG---------------------------------GTG------------------------------------------------------------------AATGCT------------------TGGCTTGGT---TTTGTTGTCGGAATGGCAGGCTGGTTCTACATTCTGTATGAAATC---------------TTT------GCG---GGCGAAGCTGGCAAAGCATCAGCAGAG------CAG---GCTCCGGCGTCGGTG---CAG---TCA---GCG---TTC---TCA---ACAATG---CGCTGGATCGTGACGATC---------------------------------------------------------------GGTTGG---------GCGATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYFILAA---V-AVVSG-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWFYILYEI-----F--A-GEAGKASAE--Q-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_EU079159 [IV-Proteo4-BAC17H08] NASB_55_env_samples_EU079159 gi|156106478|gb|EU079159| Uncultured organism clone NASB 55 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 55 putative proteorhodopsin gene, partial cds EU079159 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGATATATAGACTGGCTTATTACTGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTTGCTGCTGTTGCAGTTGTGAGTGGTGGCATCTTCTGGCGGCTGCTTATTGGCTCGCTTGTCATGCTGGTAGCTGGTTACGCCGGTGAGGCCGGACTGGTGAATGCTTGGCTTGGTTTTGTTGTCGGAATGGCAGGCTGGTTCTACATTCTGTATGAAATCTTTGCGGGCGAAGCTGGCAAAGCATCAGCAGAGCAGGCTCCGGCGTCGGTGCAGTCAGCGTTCTCAACAATGCGCTGGATCGTGACGATCGGTTGGGCTATCTAC RYIDWLITVPLQMVEFYFILAAVAVVSGGIFWRLLIGSLVMLVAGYAGEAGLVNAWLGFVVGMAGWFYILYEIFAGEAGKASAEQAPASVQSAFSTMRWIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATATATAGACTGG------------------------CTTATTACTGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTTGCTGCT---------GTT---GCAGTTGTGAGTGGT---GGCATC------------------------------------TTCTGGCGG---CTGCTTATTGGCTCGCTTGTCATGCTGGTAGCTGGTTACGCCGGTGAG---------GCC------------------GGA------CTG---------------------------------GTG------------------------------------------------------------------AATGCT------------------TGGCTTGGT---TTTGTTGTCGGAATGGCAGGCTGGTTCTACATTCTGTATGAAATC---------------TTT------GCG---GGCGAAGCTGGCAAAGCATCAGCAGAG------CAG---GCTCCGGCGTCGGTG---CAG---TCA---GCG---TTC---TCA---ACAATG---CGCTGGATCGTGACGATC---------------------------------------------------------------GGTTGG---------GCTATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYFILAA---V-AVVSG-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWFYILYEI-----F--A-GEAGKASAE--Q-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ926112 [IV-Proteo4-BAC17H08] BOUM_OTU025_env_samples gb|KJ926112| Uncultured bacterium clone BOUM OTU025 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU025 putative proteorhodopsin gene, partial cds KJ926112 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 39.0995 5.3403333 #na #na #na #na #na GTTGATTGGCTTATTACTGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTTGCTGCTGTTGCAGTTGTGAGTGGTGGCATCTTCTGGCGGCTGCTTATTGGCTCACTTGTCATGCTGGTAGCTGGTTACGCCGGTGAGGCCGGACTGGTGAATGCTTGGCTTGGTTTTGTTGTCGGAATGGCAGGCTGGTTCTACATTCTGTATGAAATCTTTGCGGGCGAAGCTGGCAAAGCATCAGCAGAGCAGGCTCCGGCGTCGGTGCAGTCAGCGTTCTCAACAATGCGCTGGATCGTGACGATCGGCTGGGCTATCTAC VDWLITVPLQMVEFYFILAAVAVVSGGIFWRLLIGSLVMLVAGYAGEAGLVNAWLGFVVGMAGWFYILYEIFAGEAGKASAEQAPASVQSAFSTMRWIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGATTGG------------------------CTTATTACTGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTTGCTGCT---------GTT---GCAGTTGTGAGTGGT---GGCATC------------------------------------TTCTGGCGG---CTGCTTATTGGCTCACTTGTCATGCTGGTAGCTGGTTACGCCGGTGAG---------GCC------------------GGA------CTG---------------------------------GTG------------------------------------------------------------------AATGCT------------------TGGCTTGGT---TTTGTTGTCGGAATGGCAGGCTGGTTCTACATTCTGTATGAAATC---------------TTT------GCG---GGCGAAGCTGGCAAAGCATCAGCAGAG------CAG---GCTCCGGCGTCGGTG---CAG---TCA---GCG---TTC---TCA---ACAATG---CGCTGGATCGTGACGATC---------------------------------------------------------------GGCTGG---------GCTATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPLQMVEFYFILAA---V-AVVSG-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWFYILYEI-----F--A-GEAGKASAE--Q-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_EU079160 [IV-Proteo4-BAC17H08] NASB_57_env_samples_EU079160 gi|156106480|gb|EU079160| Uncultured organism clone NASB 57 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 57 putative proteorhodopsin gene, partial cds EU079160 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGGTATATCGATTGGCTTATTACTGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTTGCTGCTGTTGCAGTTGTGAGTGGTGGCATCTTCTGGCGGCTGCTTATTGGCTCGCTTGTCATGCTGGTAGCTGGTTACGCCGGTGAGGCCGGACTGGTGAATGCTTGGCTTGGTTTTGTTGTCGGAATGGCAGGCTGGTTCTACATTCTGTATGAAATCTTTGCGGGCGAAGCTGGCAAAGCATCAGCAGAGCAGGCTCCGGCGTCGGTGCAGTCAGCGTTCTCAACAATGCGCTGGATCGTGACGATCGGCTGGGCAATATAC RYIDWLITVPLQMVEFYFILAAVAVVSGGIFWRLLIGSLVMLVAGYAGEAGLVNAWLGFVVGMAGWFYILYEIFAGEAGKASAEQAPASVQSAFSTMRWIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTATATCGATTGG------------------------CTTATTACTGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTTGCTGCT---------GTT---GCAGTTGTGAGTGGT---GGCATC------------------------------------TTCTGGCGG---CTGCTTATTGGCTCGCTTGTCATGCTGGTAGCTGGTTACGCCGGTGAG---------GCC------------------GGA------CTG---------------------------------GTG------------------------------------------------------------------AATGCT------------------TGGCTTGGT---TTTGTTGTCGGAATGGCAGGCTGGTTCTACATTCTGTATGAAATC---------------TTT------GCG---GGCGAAGCTGGCAAAGCATCAGCAGAG------CAG---GCTCCGGCGTCGGTG---CAG---TCA---GCG---TTC---TCA---ACAATG---CGCTGGATCGTGACGATC---------------------------------------------------------------GGCTGG---------GCAATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYFILAA---V-AVVSG-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWFYILYEI-----F--A-GEAGKASAE--Q-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_EU079158 [IV-Proteo4-BAC17H08] NASB_8_env_samples_EU079158 gi|156106476|gb|EU079158| Uncultured organism clone NASB 8 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 8 putative proteorhodopsin gene, partial cds EU079158 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGTTACATTGATTGGCTTATTACTGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTTGCTGCTGTTGCAGTTGTGAGTGGTGGCATCTTCTGGCGGCTGCTTATTGGCTCGCTTGTCATGCTGGTAGCTGGTTACGCCGGTGAGGCCGGACTGGTGAATGCTTGGCTTGGTTTTGTTGTCGGAATGGCAGGCTGGTTCTACATTCTGTATGAAATCTTTGCGGGCGAAGCTGGCAAAGCATCAGCAGAGCAGGCTCCGGCGTCGGTGCAGTCAGCGTTCTCAACAATGCGCTGGATCGTGACGATCGGGTGGGCAATATAC RYIDWLITVPLQMVEFYFILAAVAVVSGGIFWRLLIGSLVMLVAGYAGEAGLVNAWLGFVVGMAGWFYILYEIFAGEAGKASAEQAPASVQSAFSTMRWIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTACATTGATTGG------------------------CTTATTACTGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTTGCTGCT---------GTT---GCAGTTGTGAGTGGT---GGCATC------------------------------------TTCTGGCGG---CTGCTTATTGGCTCGCTTGTCATGCTGGTAGCTGGTTACGCCGGTGAG---------GCC------------------GGA------CTG---------------------------------GTG------------------------------------------------------------------AATGCT------------------TGGCTTGGT---TTTGTTGTCGGAATGGCAGGCTGGTTCTACATTCTGTATGAAATC---------------TTT------GCG---GGCGAAGCTGGCAAAGCATCAGCAGAG------CAG---GCTCCGGCGTCGGTG---CAG---TCA---GCG---TTC---TCA---ACAATG---CGCTGGATCGTGACGATC---------------------------------------------------------------GGGTGG---------GCAATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYFILAA---V-AVVSG-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWFYILYEI-----F--A-GEAGKASAE--Q-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_1105108406896 [IV-Proteo4-BAC17H08] JCVI_ORF_1105108406896_GS031_Coastal_upwelling_12m jcvi|1105108406896| 1105108406896 JCVI ORF 1105108406896 1105108406896 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 10-FEB-2004 Coastal_upwelling/12m_depth/S_n.a/GS031/Upwelling/Fernandina_Island/Galapagos_Islands Pacific Ocean marine -0.3011111 -91.651665 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATTATGAAACCATCTTTGGGTATGACAGCTAAGGTCGGTCTGCTAGTCGCTGGCTTAGTTTCGCTCCCATCTATCGCTAACGCGGCTACAGCCATGTTGGCCACGAACGATTACGTAGGTATTTCGTTCTGGACAATCTCAATGGCTATGGTTGCTGCTTCGATTTTCTTCTTGATGGAAGCTGGCCGTTTGCCAGGCAAGTGGAAAACAGCAATGACAATCGGTGCTCTGGTACAGATTATCGCAGCTGTCCACTACTTCTACATGAGAGATGTATGGGTAATGACCGGTGATACGCCGACGGTATATCGTTATGTCGATTGGCTCATCACAGTTCCACTGCAAATGGTTGAGTTCTACTTCATCCTGGCTGCTGTTGCAGCTGTCAGCGGTGGTATTTTCTGGCGTCTGCTTATTGGTTCGCTCGTCATGCTGGTTGCTGGTTATGCCGGCGAAGCAGGACTTGTGAATGCATGGCTCGGCTTTGTTGTCGGGATGGCAGGCTGGTTCTACATCCTGTATGAGATCTTTGCTGGTGAAGCTGGCAAGGCCTCAGCTGAGCAGGCTCCTGAGTCAGTTCAATCAGCATTTTCAACAATGCGCTGGATCGTGACGATCGGCTGGGCAATTTACCCGCTGGGTTATTTCCTGGGCTATCTGAACGGCGCTGCCGATGCAGTGACGCTGAACGTGATTTACAACATTGCTGACGTTGTAAACAAGATCGCGTTCGTAGCGGTTATCTGGGCAGCAGCAAATGCTGAAGCCTCAAAGGCC IMKPSLGMTAKVGLLVAGLVSLPSIANAATAMLATNDYVGISFWTISMAMVAASIFFLMEAGRLPGKWKTAMTIGALVQIIAAVHYFYMRDVWVMTGDTPTVYRYVDWLITVPLQMVEFYFILAAVAAVSGGIFWRLLIGSLVMLVAGYAGEAGLVNAWLGFVVGMAGWFYILYEIFAGEAGKASAEQAPESVQSAFSTMRWIVTIGWAIYPLGYFLGYLNGAADAVTLNVIYNIADVVNKIAFVAVIWAAANAEASKA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTATGAAACCATCTTTGGGTATGACAGCTAAGGTCGGTCTGCTAGTCGCTGGCTTAGTTTCGCTCCCATCTATCGCTAACGCGGCTACAGCCATGTTGGCCACGAACGATTACGTAGGTATTTCGTTCTGGACAATCTCAATGGCTATGGTTGCTGCTTCGATTTTCTTCTTGATGGAAGCTGGCCGTTTGCCAGGC---AAGTGGAAAACAGCAATGACAATCGGTGCTCTGGTACAGATTATCGCAGCTGTCCACTACTTCTACATGAGAGATGTATGGGTA------------------------------ATGACC---------------------GGTGATACGCCGACGGTATATCGTTATGTCGATTGG------------------------CTCATCACAGTTCCACTGCAAATGGTTGAGTTCTACTTCATCCTGGCTGCT---------GTT---GCAGCTGTCAGCGGT---GGTATT------------------------------------TTCTGGCGT---CTGCTTATTGGTTCGCTCGTCATGCTGGTTGCTGGTTATGCCGGCGAA---------GCA------------------GGA------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTTGTCGGGATGGCAGGCTGGTTCTACATCCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGGCCTCAGCTGAG------CAG---GCTCCTGAGTCAGTT---CAA---TCA---GCA---TTT---TCA---ACAATG---CGCTGGATCGTGACGATC---------------------------------------------------------------GGCTGG---------GCAATTTACCCGCTGGGTTATTTCCTGGGCTATCTG---------------------------------------AACGGCGCTGCCGATGCAGTGACGCTGAACGTGATTTACAACATTGCTGACGTTGTAAACAAGATCGCGTTCGTAGCGGTTATCTGGGCAGCAGCAAATGCTGAA---GCCTCAAAGGCC--------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------IMKPSLGMTAKVGLLVAGLVSLPSIANAATAMLATNDYVGISFWTISMAMVAASIFFLMEAGRLPG-KWKTAMTIGALVQIIAAVHYFYMRDVWV----------MT-------GDTPTVYRYVDW--------LITVPLQMVEFYFILAA---V-AAVSG-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWFYILYEI-----F--A-GEAGKASAE--Q-APESV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYPLGYFLGYL-------------NGAADAVTLNVIYNIADVVNKIAFVAVIWAAANAE-ASKA------------------------------------- [IV-Proteo4-BAC17H08]_1112727981647 [IV-Proteo4-BAC17H08] JCVI_ORF_1112727981647_GS116_Open_Ocean_2m jcvi|1112727981647| 1112727981647 JCVI ORF 1112727981647 1112727981647 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 17-AUG-2005 Open_Ocean/2m_depth/S_33.1_psu/GS116/Outside_Seychelles/Indian_Ocean/Indian_Ocean Indian Ocean marine -4.635 56.836113 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGACAGCTAAGGTCGGTCTGCTAGTCGCTGGCTTAGTTTCGCTCCCATCTATCGCTAACGCGGCTACAGCCATGTTGGCCACGAACGATTACGTAGGTATTTCGTTCTGGACAATCTCAATGGCTATGGTTGCTGCTTCGATTTTCTTCTTGATGGAAGCTGGCCGTTTGCCAGGCAAGTGGAAAACAGCAATGACAATCGGTGCTCTGGTGCAGATTATCGCAGCTGTCCACTACTTCTACATGAGAGATGTATGGGTAATGACCGGTGATACGCCGACGGTATATCGTTATGTCGATTGGCTCATCACAGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTGGCTGCTGTTGCAGCTGTCAGCGGTGGTATTTTCTGGCGTCTGCTTATTGGTTCGCTCGTCATGCTGGTTGCTGGTTATGCCGGCGAAGCAGGACTTGTGAATGCATGGCTCGGCTTTGTTGTCGGGATGGCAGGCTGGTTCTACATCCTGTATGAGATCTTTGCTGGTGAAGCTGGCAAGGCCTCAGCTGAGCAGGCTCCTGAGTCAGTTCAATCAGCATTTTCAACAATGCGCTGGATCGTGACGATCGGCTGGGCAATTTACCCGCTGGGTTATTTCCTGGGCTATCTGAACGGCGCTGCCGATGCAGTGACGCTGAACGTGATTTACAACATCGCTGACGTTGTAAACAAGATCGCGTTCGTAGCGGTTATCTGGGCAGCAGCAAATGCTGAAGCCTCAAAGGCC MTAKVGLLVAGLVSLPSIANAATAMLATNDYVGISFWTISMAMVAASIFFLMEAGRLPGKWKTAMTIGALVQIIAAVHYFYMRDVWVMTGDTPTVYRYVDWLITVPLQMVEFYFILAAVAAVSGGIFWRLLIGSLVMLVAGYAGEAGLVNAWLGFVVGMAGWFYILYEIFAGEAGKASAEQAPESVQSAFSTMRWIVTIGWAIYPLGYFLGYLNGAADAVTLNVIYNIADVVNKIAFVAVIWAAANAEASKA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGACAGCTAAGGTCGGTCTGCTAGTCGCTGGCTTAGTTTCGCTCCCATCTATCGCTAACGCGGCTACAGCCATGTTGGCCACGAACGATTACGTAGGTATTTCGTTCTGGACAATCTCAATGGCTATGGTTGCTGCTTCGATTTTCTTCTTGATGGAAGCTGGCCGTTTGCCAGGC---AAGTGGAAAACAGCAATGACAATCGGTGCTCTGGTGCAGATTATCGCAGCTGTCCACTACTTCTACATGAGAGATGTATGGGTA------------------------------ATGACC---------------------GGTGATACGCCGACGGTATATCGTTATGTCGATTGG------------------------CTCATCACAGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTGGCTGCT---------GTT---GCAGCTGTCAGCGGT---GGTATT------------------------------------TTCTGGCGT---CTGCTTATTGGTTCGCTCGTCATGCTGGTTGCTGGTTATGCCGGCGAA---------GCA------------------GGA------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTTGTCGGGATGGCAGGCTGGTTCTACATCCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGGCCTCAGCTGAG------CAG---GCTCCTGAGTCAGTT---CAA---TCA---GCA---TTT---TCA---ACAATG---CGCTGGATCGTGACGATC---------------------------------------------------------------GGCTGG---------GCAATTTACCCGCTGGGTTATTTCCTGGGCTATCTG---------------------------------------AACGGCGCTGCCGATGCAGTGACGCTGAACGTGATTTACAACATCGCTGACGTTGTAAACAAGATCGCGTTCGTAGCGGTTATCTGGGCAGCAGCAAATGCTGAA---GCCTCAAAGGCC--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MTAKVGLLVAGLVSLPSIANAATAMLATNDYVGISFWTISMAMVAASIFFLMEAGRLPG-KWKTAMTIGALVQIIAAVHYFYMRDVWV----------MT-------GDTPTVYRYVDW--------LITVPLQMVEFYFILAA---V-AAVSG-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWFYILYEI-----F--A-GEAGKASAE--Q-APESV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYPLGYFLGYL-------------NGAADAVTLNVIYNIADVVNKIAFVAVIWAAANAE-ASKA------------------------------------- [IV-Proteo4-BAC17H08]_1105098834774 [IV-Proteo4-BAC17H08] JCVI_ORF_1105098834774_GS035_Coastal_2m jcvi|1105098834774| 1105098834774 JCVI ORF 1105098834774 1105098834774 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 01-mars-04 Coastal/2m_depth/S_34.5_psu/GS035/Wolf_Island/Galapagos_Islands Pacific Ocean marine 1.3891667 -91.81695 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATTATGAAACCATCTTTGGGTATGACAGCTAAGGTCGGTCTGCTAGTCGCCGGCTTAGTTTCGCTCCCATCTATCGCTAACGCGGCTACAGCCATGTTGGCCACGAACGATTACGTAGGTATTTCGTTCTGGACAATTTCAATGGCTATGGTTGCTGCTTCGATTTTCTTCTTGATGGAAGCTGGCCGTTTGCCAGGCAAGTGGAAAACAGCAATGACAATCGGTGCTCTGGTGCAGATTATCGCAGCTGTCCACTACTTCTACATGAGAGATGTATGGGTAATGACCGGTGATACGCCGACGGTATATCGTTATGTCGATTGGCTCATCACAGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTGGCTGCTGTTGCAGCTGTCAGCGGTGGTATTTTCTGGCGTCTGCTTATTGGTTCGCTCGTCATGCTGGTTGCTGGTTATGCCGGCGAAGCAGGGCTTGTGAATGCATGGCTCGGCTTTGTTGTCGGGATGGCAGGCTGGTTCTACATCCTGTATGAGATCTTTGCTGGTGAAGCTGGCAAGGCCTCAGCTGAGCAGGCTCCTGAGTCAGTTCAGTCAGCATTTTCAACAATGCGCTGGATCGTGACGATCGGCTGGGCAATTTACCCGCTGGGTTATTTCCTGGGCTATCTGAACGGCGCTGCCGATGCAGTGACGCTGAACGTGATTTACAACATCGCTGACGTTGTAAACAAGATCGCGTTCGTAGCGGTTATCTGGGCAGCAGCAAATGCTGAAGCATCAAAGGCC IMKPSLGMTAKVGLLVAGLVSLPSIANAATAMLATNDYVGISFWTISMAMVAASIFFLMEAGRLPGKWKTAMTIGALVQIIAAVHYFYMRDVWVMTGDTPTVYRYVDWLITVPLQMVEFYFILAAVAAVSGGIFWRLLIGSLVMLVAGYAGEAGLVNAWLGFVVGMAGWFYILYEIFAGEAGKASAEQAPESVQSAFSTMRWIVTIGWAIYPLGYFLGYLNGAADAVTLNVIYNIADVVNKIAFVAVIWAAANAEASKA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTATGAAACCATCTTTGGGTATGACAGCTAAGGTCGGTCTGCTAGTCGCCGGCTTAGTTTCGCTCCCATCTATCGCTAACGCGGCTACAGCCATGTTGGCCACGAACGATTACGTAGGTATTTCGTTCTGGACAATTTCAATGGCTATGGTTGCTGCTTCGATTTTCTTCTTGATGGAAGCTGGCCGTTTGCCAGGC---AAGTGGAAAACAGCAATGACAATCGGTGCTCTGGTGCAGATTATCGCAGCTGTCCACTACTTCTACATGAGAGATGTATGGGTA------------------------------ATGACC---------------------GGTGATACGCCGACGGTATATCGTTATGTCGATTGG------------------------CTCATCACAGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTGGCTGCT---------GTT---GCAGCTGTCAGCGGT---GGTATT------------------------------------TTCTGGCGT---CTGCTTATTGGTTCGCTCGTCATGCTGGTTGCTGGTTATGCCGGCGAA---------GCA------------------GGG------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTTGTCGGGATGGCAGGCTGGTTCTACATCCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGGCCTCAGCTGAG------CAG---GCTCCTGAGTCAGTT---CAG---TCA---GCA---TTT---TCA---ACAATG---CGCTGGATCGTGACGATC---------------------------------------------------------------GGCTGG---------GCAATTTACCCGCTGGGTTATTTCCTGGGCTATCTG---------------------------------------AACGGCGCTGCCGATGCAGTGACGCTGAACGTGATTTACAACATCGCTGACGTTGTAAACAAGATCGCGTTCGTAGCGGTTATCTGGGCAGCAGCAAATGCTGAA---GCATCAAAGGCC--------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------IMKPSLGMTAKVGLLVAGLVSLPSIANAATAMLATNDYVGISFWTISMAMVAASIFFLMEAGRLPG-KWKTAMTIGALVQIIAAVHYFYMRDVWV----------MT-------GDTPTVYRYVDW--------LITVPLQMVEFYFILAA---V-AAVSG-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWFYILYEI-----F--A-GEAGKASAE--Q-APESV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYPLGYFLGYL-------------NGAADAVTLNVIYNIADVVNKIAFVAVIWAAANAE-ASKA------------------------------------- [IV-Proteo4-BAC17H08]_1105119832664 [IV-Proteo4-BAC17H08] JCVI_ORF_1105119832664 jcvi|1105119832664| 1105119832664 JCVI ORF 1105119832664 1105119832664 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 04-FEB-2004 Coastal/2m_depth/S_n.a/GS028/Coastal_Floreana/Galapagos_Islands Pacific Ocean marine -1.2169445 -90.319725 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf CTGGACAATTTCAATGGCTATGGTTGCTGCTTCGATTTTCTTCTTGATGGAAGCTGGCCGTTGCCAGGCAAGTGGAAAACAGCAATGACAATCGGTGCTCTGGTGCAGATTATTGCAGCTGTCCACTACTTCTACATGAGAGATGTATGGGTAATGACCGGTGATACGCCGACGGTATATCGTTATGTCGATTGGCTCATCACAGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTGGCTGCTGTTGCAGCTGTCAGCGGTGGTATTTTCTGGCGTCTGCTTATTGGTTCGCTCGTCATGCTGGTTGCTGGTTATGCCGGCGAAGCAGGGCTTGTGAATGCATGGCTCGGCTTTGTTGTCGGGATGGCAGGCTGGTTCTACATCCTGTATGAGATCTTTGCTGGTGAAGCTGGCAAGGCCTCAGCTGAGCAGGCTCCTGAGTCAGTTCAGTCAGCATTTTCAACAATGCGCTGGATCGTGACGATCGGCTGGGCAATTTACCCGCTGGGTTATTTCCTGGGCTATCTGAACGGCGCTGCCGATGCAGTGACGCTGAACGTGATTTACAACATCGCTGACGTTGTAAACAAGATCGCGTTCGTAGCGGTTATCTGGGCAGCAGCAAATGCTGAAGCCTCAAAGGCC LDNFNGYGCCFDFLLDGSWPLPGKWKTAMTIGALVQIIAAVHYFYMRDVWVMTGDTPTVYRYVDWLITVPLQMVEFYFILAAVAAVSGGIFWRLLIGSLVMLVAGYAGEAGLVNAWLGFVVGMAGWFYILYEIFAGEAGKASAEQAPESVQSAFSTMRWIVTIGWAIYPLGYFLGYLNGAADAVTLNVIYNIADVVNKIAFVAVIWAAANAEASKA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGGACAATTTCAATGGCTATGGTTGCTGCTTC---------------------------------GATTTTCTTCTTGATGGAAGCTGGCCGTTGCCAGGC---AAGTGGAAAACAGCAATGACAATCGGTGCTCTGGTGCAGATTATTGCAGCTGTCCACTACTTCTACATGAGAGATGTATGGGTA------------------------------ATGACC---------------------GGTGATACGCCGACGGTATATCGTTATGTCGATTGG------------------------CTCATCACAGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTGGCTGCT---------GTT---GCAGCTGTCAGCGGT---GGTATT------------------------------------TTCTGGCGT---CTGCTTATTGGTTCGCTCGTCATGCTGGTTGCTGGTTATGCCGGCGAA---------GCA------------------GGG------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTTGTCGGGATGGCAGGCTGGTTCTACATCCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGGCCTCAGCTGAG------CAG---GCTCCTGAGTCAGTT---CAG---TCA---GCA---TTT---TCA---ACAATG---CGCTGGATCGTGACGATC---------------------------------------------------------------GGCTGG---------GCAATTTACCCGCTGGGTTATTTCCTGGGCTATCTG---------------------------------------AACGGCGCTGCCGATGCAGTGACGCTGAACGTGATTTACAACATCGCTGACGTTGTAAACAAGATCGCGTTCGTAGCGGTTATCTGGGCAGCAGCAAATGCTGAA---GCCTCAAAGGCC--------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------LDNFNGYGCCF-----------DFLLDGSWPLPG-KWKTAMTIGALVQIIAAVHYFYMRDVWV----------MT-------GDTPTVYRYVDW--------LITVPLQMVEFYFILAA---V-AAVSG-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWFYILYEI-----F--A-GEAGKASAE--Q-APESV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYPLGYFLGYL-------------NGAADAVTLNVIYNIADVVNKIAFVAVIWAAANAE-ASKA------------------------------------- [IV-Proteo4-c]_KJ926200 [IV-Proteo4-c] RHOMEO_AG_OTU2 gb|KJ926200| Uncultured bacterium cloneRHOMEO AG OTU2 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU2 putative proteorhodopsin gene, partial cds KJ926200 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGCTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCCGTAACCGTCGTAAGCGCTGGAGTTTTCTGGCGTTTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTATATGGGAGAAGCAGGATTGGCTCCAGCATGGCCAGCATTTATTGTCGGCATGCTAGGTTGGGGGTACATCCTTTATGAAATCTTCGCCGGTGAAGCGGGTCGGGTATCCTCCGAATCAGCACCAGCGGGAGTTCAGTCTGCGTTCGGCACAATGCGTTTGATCGTAACTGTA WLITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCC---------GTA---ACCGTCGTAAGCGCT---GGAGTT------------------------------------TTCTGGCGT---TTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTATATGGGAGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTTATTGTCGGCATGCTAGGTTGGGGGTACATCCTTTATGAAATC---------------TTC------GCC---GGTGAAGCGGGTCGGGTATCCTCCGAA------TCA---GCACCAGCGGGAGTT---CAG---TCT---GCG---TTC---GGC---ACAATG---CGTTTGATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ926202 [IV-Proteo4-c] RHOMEO_AG_OTU2_u3 gb|KJ926202| Uncultured bacterium cloneRHOMEO AG OTU2 u3 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU2 u3 putative proteorhodopsin gene, partial cds KJ926202 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGCTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCCGTAACCGTCGTAAGCGCTGGAGTTTTCTGGCGTTTGACGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGAGAAGCAGGATTGGCTCCAGCGTGGCCAGCATTTATTGTCGGCATGCTAGGTTGGGGGTACATCCTTTATGAGATCTTCGCCGGTGAAGCGGGTCGGGTATCCTCCGAATCAGCACCAGCGGGAGTTCAGTCTGCGTTCGGCACAATGCGTTTGATCGTAACTGTA WLITVPLQMVEFYFILAAVTVVSAGVFWRLTIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCC---------GTA---ACCGTCGTAAGCGCT---GGAGTT------------------------------------TTCTGGCGT---TTGACGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGAGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCG------------------TGGCCAGCA---TTTATTGTCGGCATGCTAGGTTGGGGGTACATCCTTTATGAGATC---------------TTC------GCC---GGTGAAGCGGGTCGGGTATCCTCCGAA------TCA---GCACCAGCGGGAGTT---CAG---TCT---GCG---TTC---GGC---ACAATG---CGTTTGATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LTIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ926114 [IV-Proteo4-c] BOUM_OTU027_env_samples gb|KJ926114| Uncultured bacterium clone BOUM OTU027 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU027 putative proteorhodopsin gene, partial cds KJ926114 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 34.046 24.49733 #na #na #na #na #na GTTGATTGGCTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCCGTAACCGTCGTAAGCGCTGGAGTTTTCTGGCGTTTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGAGAAGCAGGATTGGCTCCAGCATGGCCAGCATTTATTGTCGGCATGCTAGGTTGGGGTTACATTCTTTATGAAATCTTCGCCGGTGAAGCGGGTCGGGTTTCCTCCGAATCAGCACCAGCGGGAGTTCAGTCTGCGTTCGGCACAATGCGTTTGATAGTAACTGTAGGATGGGCTATTTAT VDWLITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGATTGG------------------------CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCC---------GTA---ACCGTCGTAAGCGCT---GGAGTT------------------------------------TTCTGGCGT---TTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGAGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTTATTGTCGGCATGCTAGGTTGGGGTTACATTCTTTATGAAATC---------------TTC------GCC---GGTGAAGCGGGTCGGGTTTCCTCCGAA------TCA---GCACCAGCGGGAGTT---CAG---TCT---GCG---TTC---GGC---ACAATG---CGTTTGATAGTAACTGTA---------------------------------------------------------------GGATGG---------GCTATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_EU079230 [IV-Proteo4-c] clone_A_Mtd1_006_EU079230 gi|156106619|gb|EU079230| Uncultured organism clone A Mtd1 006 putative proteorhodopsin gene, partial cds. Uncultured organism clone A Mtd1 006 putative proteorhodopsin gene, partial cds. EU079230 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic DNA other 27-FEB-2008 #na Sargasso Sea surface water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99-109 (2008) 18211270 #na CTGCAAATGGTCGAATTTTACTTCATTCTTGCTGCCGTAACCGTCGTAAGCGCTGGAGTTTTCTGGCGCTTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGAGAAGCAGGATTGGCTCCAGCATGGCCTGCATTTATTGTCGGCATGCTAGGTTGGGGTTACATCCTTTATGAAATCTTTGCGGTGAAGCCGGC LQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAVKP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCAAATGGTCGAATTTTACTTCATTCTTGCTGCC---------GTA---ACCGTCGTAAGCGCT---GGAGTT------------------------------------TTCTGGCGC---TTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGAGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCTGCA---TTTATTGTCGGCATGCTAGGTTGGGGTTACATCCTTTATGAAATC---------------TTT------GCG---GTGAAGCCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-VKP------------------------------------------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_EU079237 [IV-Proteo4-c] clone_A_Mtd1_007_EU079237 gi|156106633|gb|EU079237| Uncultured organism clone A Mtd1 007 putative proteorhodopsin gene, partial cds. Uncultured organism clone A Mtd1 007 putative proteorhodopsin gene, partial cds. EU079237 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic DNA other 27-FEB-2008 #na Sargasso Sea surface water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99-109 (2008) 18211270 #na CTGCAAATGGTAGAATTTTACTTCATTCTTGCTGCCGTAACCGTCGTAAGCGCTGGAGTTTTCTGGCGTTTGATGAATGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGAGAGGCAGGATTGGCTCCAGCCTGGCCAGCATTTATTGTCGGCATGCTAGGTTGGGGTTACATCCTTTATGAAATTTTTGCGGTGAGGCCGGC LQMVEFYFILAAVTVVSAGVFWRLMNGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAVRP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCAAATGGTAGAATTTTACTTCATTCTTGCTGCC---------GTA---ACCGTCGTAAGCGCT---GGAGTT------------------------------------TTCTGGCGT---TTGATGAATGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGAGAG---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCC------------------TGGCCAGCA---TTTATTGTCGGCATGCTAGGTTGGGGTTACATCCTTTATGAAATT---------------TTT------GCG---GTGAGGCCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LQMVEFYFILAA---V-TVVSA-GV------------FWR-LMNGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-VRP------------------------------------------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ926203 [IV-Proteo4-c] RHOMEO_AG_OTU2_u4 gb|KJ926203| Uncultured bacterium cloneRHOMEO AG OTU2 u4 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU2 u4 putative proteorhodopsin gene, partial cds KJ926203 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGCTGATAACTGTTCCGCTTCAAATGGTTGAGTTCTACTTCATTCTTGCTGCCGTAACCGTCGTAAGCGCTGGAGTTTTCTGGCGTTTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGCGAGGCAGGATTGGCTCCAGCATGGCCAGCATTTATTGTCGGCATGCTAGGTTGGGGTTACATCCTTTATGAAATCTTCGCCGGTGAAGCGGGTCGGGTTTCCTCCGAATCTGCACCAGCGGGAGTTCAGTCTGCGTTCGGCACAATGCGTTTGATCGTAACTGTA WLITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATAACTGTTCCGCTTCAAATGGTTGAGTTCTACTTCATTCTTGCTGCC---------GTA---ACCGTCGTAAGCGCT---GGAGTT------------------------------------TTCTGGCGT---TTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGCGAG---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTTATTGTCGGCATGCTAGGTTGGGGTTACATCCTTTATGAAATC---------------TTC------GCC---GGTGAAGCGGGTCGGGTTTCCTCCGAA------TCT---GCACCAGCGGGAGTT---CAG---TCT---GCG---TTC---GGC---ACAATG---CGTTTGATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ926201 [IV-Proteo4-c] RHOMEO_AG_OTU2_u2 gb|KJ926201| Uncultured bacterium cloneRHOMEO AG OTU2 u2 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU2 u2 putative proteorhodopsin gene, partial cds KJ926201 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGCTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCCGTAACCGTCGTAAGCGCTGGAGTTTTCTGGCGTTTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGAGAAGCAGGATTGGCTCCAGCATGGCCAGCATTTATTGTCGGCATGCTAGGTTGGGGTTACATCCTTTATGAAATCTTCGCCGGTGAAGCGGGTCGGGTTTCCTCCGAATCAGCACCAGCGGGAGTTCAGTCTGCGTTCGGCACCATGCGTTTGATCGTAACTGTA WLITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCC---------GTA---ACCGTCGTAAGCGCT---GGAGTT------------------------------------TTCTGGCGT---TTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGAGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTTATTGTCGGCATGCTAGGTTGGGGTTACATCCTTTATGAAATC---------------TTC------GCC---GGTGAAGCGGGTCGGGTTTCCTCCGAA------TCA---GCACCAGCGGGAGTT---CAG---TCT---GCG---TTC---GGC---ACCATG---CGTTTGATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_DQ203587 [IV-Proteo4-c] medHO120A3_env_samples_DQ203587 gi|77547622|gb|DQ203587| Uncultured bacterium clone medHO120A3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120A3 predicted proteorhodopsin gene, partial cds DQ203587 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGACTGGCTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCCGTAACCGTCGTAAGTGCTGGAGTTTTCTGGCGTTTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTATATGGGAGAAGCAGGATTGGCTCCAGCATGGCCAGCATTTATTATCGGCATGCTAGGTTGGGGTTACATTCTTTATGAAATCTTCGCGGGTGAAGCCGGTCGGGTTTCCTCCGAGTCAGCCCCAGCGGGAGTTCAGTCTGCGTTCGGCACAATGCGTTTGATCGTAACTGTAGGGTGGGCAATTTACCCA SYIDWLITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIIGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGACTGG------------------------CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCC---------GTA---ACCGTCGTAAGTGCT---GGAGTT------------------------------------TTCTGGCGT---TTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTATATGGGAGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTTATTATCGGCATGCTAGGTTGGGGTTACATTCTTTATGAAATC---------------TTC------GCG---GGTGAAGCCGGTCGGGTTTCCTCCGAG------TCA---GCCCCAGCGGGAGTT---CAG---TCT---GCG---TTC---GGC---ACAATG---CGTTTGATCGTAACTGTA---------------------------------------------------------------GGGTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIIGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_DQ203661 [IV-Proteo4-c] medHO155A10_env_samples_DQ203661 gi|77547770|gb|DQ203661| Uncultured bacterium clone medHO155A10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155A10 predicted proteorhodopsin gene, partial cds DQ203661 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATAGACTGGCTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCCGTAACCGTCGTAAGTGCTGGAGTTTTCTGGCGTTTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGGGAAGCAGGATTGGCTCCAGCATGGCCAGCATTTATTGTCGGCATGGCTGGTTGGGGTTACATCCTTTATGAAATCTTCGCCGGTGAAGCCGGTCGGGTTTCTTCCGAGTCAGCCCCAGCGGGAGTTCAGTCTGCGTTCGGCACAATGCGTTTGATCGTAACTGTAGGGTGGGCCATTTATCCA RYIDWLITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMAGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATAGACTGG------------------------CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCC---------GTA---ACCGTCGTAAGTGCT---GGAGTT------------------------------------TTCTGGCGT---TTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGGGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTTATTGTCGGCATGGCTGGTTGGGGTTACATCCTTTATGAAATC---------------TTC------GCC---GGTGAAGCCGGTCGGGTTTCTTCCGAG------TCA---GCCCCAGCGGGAGTT---CAG---TCT---GCG---TTC---GGC---ACAATG---CGTTTGATCGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMAGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_JX863197 [IV-Proteo4-c] MALINA_OTU31_373_Q_env_samples_JX863197 gi|425477344|gb|JX863197| Uncultured bacterium clone MALINA OTU31 373 Q putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU31 373 Q putative proteorhodopsin gene, partial cds JX863197 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 08-juil-09 0m_depth Pacific Ocean marine 53.36 -159.29 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGATCACTGTTCCGCTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCGGTAACCGTTGTAAGCGCTGGAGTTTTCTGGCGTTTGATGATTGGCTCTCTAGTCATGTTGGTTGCAGGCTACATGGGAGAAGCAGGATTGGCTCCAGCATGGCCAGCATTTATTGTAGGTATGCTAGGTTGGGGTTACATCCTTTACGAAATCTTCGCCGGTGAAGCTGGGCGGGTTTCTTCTGAGTCGGCTCCAGCAGGAGTTCAGTCTGCCTTCGGTACAATGCGCTTGATCGTAACTGTA WLITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATCACTGTTCCGCTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCG---------GTA---ACCGTTGTAAGCGCT---GGAGTT------------------------------------TTCTGGCGT---TTGATGATTGGCTCTCTAGTCATGTTGGTTGCAGGCTACATGGGAGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTTATTGTAGGTATGCTAGGTTGGGGTTACATCCTTTACGAAATC---------------TTC------GCC---GGTGAAGCTGGGCGGGTTTCTTCTGAG------TCG---GCTCCAGCAGGAGTT---CAG---TCT---GCC---TTC---GGT---ACAATG---CGCTTGATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_DQ903166 [IV-Proteo4-c] clone_HB10082_DQ903166 gi|116294061|gb|DQ903166| Uncultured bacterium clone HB10082 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone HB10082 putative proteorhodopsin gene, partial cds. DQ903166 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na East China Sea surface water (ECS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na ATGGTAGCCGCTACTGTATTCTTCTTGATGGAAGCTGGACGGATGGGCGGCAAATGGAGGACGTCGCTCACAGTCGGCGCCCTTGTCACTTTGGTTGCGGCCGTGCACTACTTCTACATGAGGGACGTCTGGGCAGCTACCGGTGCTAGCCCAACAGTTTACCGATATGTAGACTGGCTGATAACCGTTCCGCTTCAAATGGTTGAATTCTACTTTATCCTTGCCGCGGTTACCGTTGTAAGCGCTGGAGTGTTCTGGCGTTTGATGATTGGCTCGCTAGTGATGTTGGTTGCAGGTTACATGGGAGAAGCAGGATTGGCTCCAGCATGGCCAGCATTCATTGTCGGCATGCTAGGATGGGGTTACATCCTCTATGAAATCTTCGCTGGTGAAGCTGGTCGGGTTTCCTCAGAGTCAGCCCCAGCGGGAGTTCAGTCAGCCTTTGGTACAATGCGCTTGATCGTAACTGTAGGATGGGCTATCTATCCA MVAATVFFLMEAGRMGGKWRTSLTVGALVTLVAAVHYFYMRDVWAATGASPTVYRYVDWLITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTATTCTTCTTGATGGAAGCTGGACGGATGGGCGGC---AAATGGAGGACGTCGCTCACAGTCGGCGCCCTTGTCACTTTGGTTGCGGCCGTGCACTACTTCTACATGAGGGACGTCTGGGCA------------------------------GCTACC---------------------GGTGCTAGCCCAACAGTTTACCGATATGTAGACTGG------------------------CTGATAACCGTTCCGCTTCAAATGGTTGAATTCTACTTTATCCTTGCCGCG---------GTT---ACCGTTGTAAGCGCT---GGAGTG------------------------------------TTCTGGCGT---TTGATGATTGGCTCGCTAGTGATGTTGGTTGCAGGTTACATGGGAGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTCATTGTCGGCATGCTAGGATGGGGTTACATCCTCTATGAAATC---------------TTC------GCT---GGTGAAGCTGGTCGGGTTTCCTCAGAG------TCA---GCCCCAGCGGGAGTT---CAG---TCA---GCC---TTT---GGT---ACAATG---CGCTTGATCGTAACTGTA---------------------------------------------------------------GGATGG---------GCTATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFLMEAGRMGG-KWRTSLTVGALVTLVAAVHYFYMRDVWA----------AT-------GASPTVYRYVDW--------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_EF088601 [IV-Proteo4-c] E400022_env_samples_EF088601 gi|126843443|gb|EF088601| Uncultured bacterium clone E400022 putative proteorhodopsin gene, partial cds Uncultured bacterium clone E400022 putative proteorhodopsin gene, partial cds EF088601 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na Bering_Sea_surface_water_sample Arctic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGCTTGCCGCTACTGTGTTCTTCTTGATGGAAGCTGGCCGGATGGGCGGCAAATGGAGGACGTCGCTCACAGTTGGCGCCCTTGTCACTTTGGTTGCAGCTGTGCACTATTTCTACATGAGGGACGTCTGGGCAGCTACCGGCGCGAGCCCGACCGTTTATCGGTATGTAGACTGGCTGATAACTGTTCCGCTCCAAATGGTTGAATTCTACTTTATCCTTGCTGCAGTCACCGTAGTAAGCTCTGGGGTCTTCTGGCGTTTGATGATTGGCTCGCTAGTGATGTTGGTTGCAGGCTACATGGGTGAAGCAGGATTGGCTCCAGCATGGCCAGCATTTATTGTTGGCATGTTAGGTTGGGGTTACATCCTTTATGAAATCTTCGCCGGTGAAGCGGGTCGGGTTTCCTCCGAGTCAGCCCCAGCGGGAGTTCAGTCTGCCTTCGGTACAATGCGCTTGATCGTAACGGTAGGTTGGGCTATTTACCCA MLAATVFFLMEAGRMGGKWRTSLTVGALVTLVAAVHYFYMRDVWAATGASPTVYRYVDWLITVPLQMVEFYFILAAVTVVSSGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACTGTGTTCTTCTTGATGGAAGCTGGCCGGATGGGCGGC---AAATGGAGGACGTCGCTCACAGTTGGCGCCCTTGTCACTTTGGTTGCAGCTGTGCACTATTTCTACATGAGGGACGTCTGGGCA------------------------------GCTACC---------------------GGCGCGAGCCCGACCGTTTATCGGTATGTAGACTGG------------------------CTGATAACTGTTCCGCTCCAAATGGTTGAATTCTACTTTATCCTTGCTGCA---------GTC---ACCGTAGTAAGCTCT---GGGGTC------------------------------------TTCTGGCGT---TTGATGATTGGCTCGCTAGTGATGTTGGTTGCAGGCTACATGGGTGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTTATTGTTGGCATGTTAGGTTGGGGTTACATCCTTTATGAAATC---------------TTC------GCC---GGTGAAGCGGGTCGGGTTTCCTCCGAG------TCA---GCCCCAGCGGGAGTT---CAG---TCT---GCC---TTC---GGT---ACAATG---CGCTTGATCGTAACGGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFLMEAGRMGG-KWRTSLTVGALVTLVAAVHYFYMRDVWA----------AT-------GASPTVYRYVDW--------LITVPLQMVEFYFILAA---V-TVVSS-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_EF088610 [IV-Proteo4-c] E400055_env_samples_EF088610 gi|126843461|gb|EF088610| Uncultured bacterium clone E400055 putative proteorhodopsin gene, partial cds Uncultured bacterium clone E400055 putative proteorhodopsin gene, partial cds EF088610 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na Bering_Sea_surface_water_sample Arctic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGCTCGCCGCTACTGTTTTCTTCTTGATGGAAGCTGGCCGGATGGGCGGCAAATGGAGGACGTCGCTCACAGTTGGCGCCCTTGTCACTTTGGTTGCAGCTGTGCACTATTTCTACATGAGGGACGTCTGGGCAGCTACCGGCGCGAGCCCGACCGTTTATCGGTATGTAGACTGGCTGATAACTGTTCCGCTCCAAATGGTTGAATTCTACTTTATCCTTGCTGCAGTCACCGTAGTAAGCTCTGGGGTCTTCTGGCGTTTGATGATTGGCTCGCTAGTGATGTTGGTTGCAGGCTACATGGGTGAAGCAGGATTGGCTCCAGCATGGCCAGCATTTATTGTTGGCATGTTAGGTTGGGGTTACATCCTTTATGAAATCTTCGCCGGTGAAGCGGGTCGGGTTTCCTCCGAGTCAGCCCCAGCGGGAGTTCAGTCTGCCTTCGGTACAATGCGCTTGATCGTAACGGTAGGCTGGGCTATCTACCCA MLAATVFFLMEAGRMGGKWRTSLTVGALVTLVAAVHYFYMRDVWAATGASPTVYRYVDWLITVPLQMVEFYFILAAVTVVSSGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTCGCCGCTACTGTTTTCTTCTTGATGGAAGCTGGCCGGATGGGCGGC---AAATGGAGGACGTCGCTCACAGTTGGCGCCCTTGTCACTTTGGTTGCAGCTGTGCACTATTTCTACATGAGGGACGTCTGGGCA------------------------------GCTACC---------------------GGCGCGAGCCCGACCGTTTATCGGTATGTAGACTGG------------------------CTGATAACTGTTCCGCTCCAAATGGTTGAATTCTACTTTATCCTTGCTGCA---------GTC---ACCGTAGTAAGCTCT---GGGGTC------------------------------------TTCTGGCGT---TTGATGATTGGCTCGCTAGTGATGTTGGTTGCAGGCTACATGGGTGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTTATTGTTGGCATGTTAGGTTGGGGTTACATCCTTTATGAAATC---------------TTC------GCC---GGTGAAGCGGGTCGGGTTTCCTCCGAG------TCA---GCCCCAGCGGGAGTT---CAG---TCT---GCC---TTC---GGT---ACAATG---CGCTTGATCGTAACGGTA---------------------------------------------------------------GGCTGG---------GCTATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFLMEAGRMGG-KWRTSLTVGALVTLVAAVHYFYMRDVWA----------AT-------GASPTVYRYVDW--------LITVPLQMVEFYFILAA---V-TVVSS-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_EF088604 [IV-Proteo4-c] E400027_env_samples_EF088604 gi|126843449|gb|EF088604| Uncultured bacterium clone E400027 putative proteorhodopsin gene, partial cds Uncultured bacterium clone E400027 putative proteorhodopsin gene, partial cds EF088604 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na Bering_Sea_surface_water_sample Arctic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTGGCCGCTACTGCTTTCTTCTTGATGGAAGCTGGCCGGATGGGCGGCAAATGGAGGACGTCGCTCACAGTTGGCGCCCTTGTAACTTTGGTTGCAGCTGTGCACTATTTCTACATGAGGGACGTCTGGGCAGCTACCGGCGCGAGCCCGACCGTTTATCGGTATGTAGACTGGCTGATAACTGTTCCGCTCCAAATGGTTGAATTCTACTTTATCCTTGCTGCAGTCACCGTAGTAAGCTCTGGGGTCTTCTGGCGTTTGATGATTGGATCGCTAGTGATGTTGGTTGCAGGCTACATGGGTGAAGCAGGATTGGCTCCAGCATGGCCGGCATTTATTGTTGGCATGTTAGGTTGGGGTTACATCCTTTATGAAATCTTCGCCGGTGAAGCGGGTCGGGTTTCCTCCGAGTCAGCCCCAGCGGGAGTTCAGTCTGCCTTCGGTACAATGCGCTTGATCGTAACGGTAGGTTGGGCGATTTACCCA MVAATAFFLMEAGRMGGKWRTSLTVGALVTLVAAVHYFYMRDVWAATGASPTVYRYVDWLITVPLQMVEFYFILAAVTVVSSGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCTTTCTTCTTGATGGAAGCTGGCCGGATGGGCGGC---AAATGGAGGACGTCGCTCACAGTTGGCGCCCTTGTAACTTTGGTTGCAGCTGTGCACTATTTCTACATGAGGGACGTCTGGGCA------------------------------GCTACC---------------------GGCGCGAGCCCGACCGTTTATCGGTATGTAGACTGG------------------------CTGATAACTGTTCCGCTCCAAATGGTTGAATTCTACTTTATCCTTGCTGCA---------GTC---ACCGTAGTAAGCTCT---GGGGTC------------------------------------TTCTGGCGT---TTGATGATTGGATCGCTAGTGATGTTGGTTGCAGGCTACATGGGTGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCGGCA---TTTATTGTTGGCATGTTAGGTTGGGGTTACATCCTTTATGAAATC---------------TTC------GCC---GGTGAAGCGGGTCGGGTTTCCTCCGAG------TCA---GCCCCAGCGGGAGTT---CAG---TCT---GCC---TTC---GGT---ACAATG---CGCTTGATCGTAACGGTA---------------------------------------------------------------GGTTGG---------GCGATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFLMEAGRMGG-KWRTSLTVGALVTLVAAVHYFYMRDVWA----------AT-------GASPTVYRYVDW--------LITVPLQMVEFYFILAA---V-TVVSS-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_EF088611 [IV-Proteo4-c] E400056_env_samples_EF088611 gi|126843463|gb|EF088611| Uncultured bacterium clone E400056 putative proteorhodopsin gene, partial cds Uncultured bacterium clone E400056 putative proteorhodopsin gene, partial cds EF088611 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na Bering_Sea_surface_water_sample Arctic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTTGCCGCTACTGTTTTCTTCTTGATGGAAGCTGGCCGGATGGGCGGTAAATGGAGGACGTCGCTCACAGTTGGCGCCCTTGTCACTTTGGTTGCAGCTGTGCACTATTTCTACATGAGGGACGTCTGGGCAGCTACCGGCGCGAGCCCGACCGTTTATCGGTATGTAGACTGGCTGATAACTGTTCCGCTCCAAATGGTTGAATTCTACTTTATCCTTGCTGCAGTCACCGTAGTAAGCTCTGGGGTCTTCTGGCGTTTGATGATTGGCTCGCTAGTGATGTTGGTTGCAGGCTACATGGGTGAAGCAGGATTGGCTCCAGCATGGCCAGCATTTATTGTTGGCATGTTAGGTTGGGGTTACATCCTTTATGAAATCTTCGCCGGTGAAGCGGGTCGGGTTTCCTCCGAGTCAGCCCCAGCGGGAGTTCAGTCTGCCTTCGGCACAATGCGCTTGATCGTAACGGTAGGTTGGGCGATTTACCCA MVAATVFFLMEAGRMGGKWRTSLTVGALVTLVAAVHYFYMRDVWAATGASPTVYRYVDWLITVPLQMVEFYFILAAVTVVSSGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTTTTCTTCTTGATGGAAGCTGGCCGGATGGGCGGT---AAATGGAGGACGTCGCTCACAGTTGGCGCCCTTGTCACTTTGGTTGCAGCTGTGCACTATTTCTACATGAGGGACGTCTGGGCA------------------------------GCTACC---------------------GGCGCGAGCCCGACCGTTTATCGGTATGTAGACTGG------------------------CTGATAACTGTTCCGCTCCAAATGGTTGAATTCTACTTTATCCTTGCTGCA---------GTC---ACCGTAGTAAGCTCT---GGGGTC------------------------------------TTCTGGCGT---TTGATGATTGGCTCGCTAGTGATGTTGGTTGCAGGCTACATGGGTGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTTATTGTTGGCATGTTAGGTTGGGGTTACATCCTTTATGAAATC---------------TTC------GCC---GGTGAAGCGGGTCGGGTTTCCTCCGAG------TCA---GCCCCAGCGGGAGTT---CAG---TCT---GCC---TTC---GGC---ACAATG---CGCTTGATCGTAACGGTA---------------------------------------------------------------GGTTGG---------GCGATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFLMEAGRMGG-KWRTSLTVGALVTLVAAVHYFYMRDVWA----------AT-------GASPTVYRYVDW--------LITVPLQMVEFYFILAA---V-TVVSS-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_EF088593 [IV-Proteo4-c] E400009_env_samples_EF088593 gi|126843427|gb|EF088593| Uncultured bacterium clone E400009 putative proteorhodopsin gene, partial cds Uncultured bacterium clone E400009 putative proteorhodopsin gene, partial cds EF088593 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na Bering_Sea_surface_water_sample Arctic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGCTGGCCGCTACTGTCTTCTTCTTGATGGAAGCTGGCCGGATGGGCGGTAAATGGAGGACGTCGCTCACAGTTGGCGCCCTTGTCACTTTGGTTGCAGCTGTGCACTATTTCTACATGAGGGACGTCTGGGCAGCTACCGGCGCGAGCCCGACCGTTTATCGGTATGTAGACTGGCTGATAACTGTTCCGCTCCAAATGGTTGAATTCTACTTTATCCTTGCTGCAGTCACCGTAGTAAGCTCTGGGGTCTTCTGGCGTTTGATGATTGGCTCGCTAGTGATGTTGGTTGCAGGCTACATGGGTGAAGCAGGATTGGCTCCAGCATGGCCAGCATTTATTGTTGGCATGTTAGGTTGGGGTTACATCCTTTATGAAATCTTCGCCGGTGAAGCGGGTCGGGTTTCCTCCGAGTCAGCCCCAGCGGGAGTTCAGTCTGCCTTCGGCACAATGCGCTTGATCGTAACGGTAGGGTGGGCTATTTACCCA MLAATVFFLMEAGRMGGKWRTSLTVGALVTLVAAVHYFYMRDVWAATGASPTVYRYVDWLITVPLQMVEFYFILAAVTVVSSGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGTCTTCTTCTTGATGGAAGCTGGCCGGATGGGCGGT---AAATGGAGGACGTCGCTCACAGTTGGCGCCCTTGTCACTTTGGTTGCAGCTGTGCACTATTTCTACATGAGGGACGTCTGGGCA------------------------------GCTACC---------------------GGCGCGAGCCCGACCGTTTATCGGTATGTAGACTGG------------------------CTGATAACTGTTCCGCTCCAAATGGTTGAATTCTACTTTATCCTTGCTGCA---------GTC---ACCGTAGTAAGCTCT---GGGGTC------------------------------------TTCTGGCGT---TTGATGATTGGCTCGCTAGTGATGTTGGTTGCAGGCTACATGGGTGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTTATTGTTGGCATGTTAGGTTGGGGTTACATCCTTTATGAAATC---------------TTC------GCC---GGTGAAGCGGGTCGGGTTTCCTCCGAG------TCA---GCCCCAGCGGGAGTT---CAG---TCT---GCC---TTC---GGC---ACAATG---CGCTTGATCGTAACGGTA---------------------------------------------------------------GGGTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFLMEAGRMGG-KWRTSLTVGALVTLVAAVHYFYMRDVWA----------AT-------GASPTVYRYVDW--------LITVPLQMVEFYFILAA---V-TVVSS-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_EF088609 [IV-Proteo4-c] E400054_env_samples_EF088609 gi|126843459|gb|EF088609| Uncultured bacterium clone E400054 putative proteorhodopsin gene, partial cds Uncultured bacterium clone E400054 putative proteorhodopsin gene, partial cds EF088609 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na Bering_Sea_surface_water_sample Arctic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTTGCCGCTACTGTTTTCTTCTTGATGGAAGCTGGCCGGATGGGCGGTAAATGGAGGACGTCGCTCACAGTTGGCGCCCTTGTCACTTTGGTTGCAGCTGTGCACTATTTCTACATGAGGGACGTCTGGGCAGCTACCGGCGCGAGCCCGACCGTTTATCGGTATGTAGACTGGCTGATAACTGTTCCGCTCCAAATGGTTGAATTCTACTTTATCCTTGCTGCAGTCACCGTAGTAAGCTCTGGGGTCTTCTGGTGTTTGATGATTGGCTCGCTAGTGATGTTGGTTGCAGGCTACATGGGTGAAGCAGGATTGGCTCCAGCATGGCCAGCATTTATTGTTGGCATGTTAGGTTGGGGTTACATCCTTTATGAAATCTTCGCCGGTGAAGCGGGTCGGGTTTCCTCCGAGTCAGCCCCAGCGGGAGTTCAGTCTGCCTTCGGCACAATGCGCTTGATCGTAACGGTAGGTTGGGCTATATATCCA MVAATVFFLMEAGRMGGKWRTSLTVGALVTLVAAVHYFYMRDVWAATGASPTVYRYVDWLITVPLQMVEFYFILAAVTVVSSGVFWCLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTTTTCTTCTTGATGGAAGCTGGCCGGATGGGCGGT---AAATGGAGGACGTCGCTCACAGTTGGCGCCCTTGTCACTTTGGTTGCAGCTGTGCACTATTTCTACATGAGGGACGTCTGGGCA------------------------------GCTACC---------------------GGCGCGAGCCCGACCGTTTATCGGTATGTAGACTGG------------------------CTGATAACTGTTCCGCTCCAAATGGTTGAATTCTACTTTATCCTTGCTGCA---------GTC---ACCGTAGTAAGCTCT---GGGGTC------------------------------------TTCTGGTGT---TTGATGATTGGCTCGCTAGTGATGTTGGTTGCAGGCTACATGGGTGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTTATTGTTGGCATGTTAGGTTGGGGTTACATCCTTTATGAAATC---------------TTC------GCC---GGTGAAGCGGGTCGGGTTTCCTCCGAG------TCA---GCCCCAGCGGGAGTT---CAG---TCT---GCC---TTC---GGC---ACAATG---CGCTTGATCGTAACGGTA---------------------------------------------------------------GGTTGG---------GCTATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFLMEAGRMGG-KWRTSLTVGALVTLVAAVHYFYMRDVWA----------AT-------GASPTVYRYVDW--------LITVPLQMVEFYFILAA---V-TVVSS-GV------------FWC-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_EF088588 [IV-Proteo4-c] E400003_env_samples_EF088588 gi|126843417|gb|EF088588| Uncultured bacterium clone E400003 putative proteorhodopsin gene, partial cds Uncultured bacterium clone E400003 putative proteorhodopsin gene, partial cds EF088588 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na Bering_Sea_surface_water_sample Arctic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGCTCGCCGCTACTGTATTCTTCTTGATGGAAGCTGGCCGGATGGGCGGCAAATGGAGGACGTCGCTCACAGTTGGCACCCTTGTCACTTTGGTTGCAGCTGTGCACTATTTCTACATGAGGGACGTCTGGGCAGCTACCGGCGCGAGCCCGACCGTTTATCGGTATGTAGACTGGCTGATAACTGTTCCGCTCCAAATGGTTGAATTCTACTTTATCCTTGCTGCAGTCACCGTAGTAAGCTCTGGGGTCTTCTGGCGTTTGATGATTGGCTCGCTAGTGATGTTGGTTGCAGGCTACATGGGTGAAGCAGGATTGGCTCCAGCATGGCCAGCATCTATTGTTGGCATGTTAGGTTGGGGTTACATCCTTTATGAAATCTTCGCCGGTGAAGCGGGTCGGGTTTCCTCCGAGTCAGCCCCAGCGGGAGTTCAGTCTGCCTTCGGTACAATGCGCTTGATCGTAACGGTAGGGTGGGCGATTTATCCA MLAATVFFLMEAGRMGGKWRTSLTVGTLVTLVAAVHYFYMRDVWAATGASPTVYRYVDWLITVPLQMVEFYFILAAVTVVSSGVFWRLMIGSLVMLVAGYMGEAGLAPAWPASIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTCGCCGCTACTGTATTCTTCTTGATGGAAGCTGGCCGGATGGGCGGC---AAATGGAGGACGTCGCTCACAGTTGGCACCCTTGTCACTTTGGTTGCAGCTGTGCACTATTTCTACATGAGGGACGTCTGGGCA------------------------------GCTACC---------------------GGCGCGAGCCCGACCGTTTATCGGTATGTAGACTGG------------------------CTGATAACTGTTCCGCTCCAAATGGTTGAATTCTACTTTATCCTTGCTGCA---------GTC---ACCGTAGTAAGCTCT---GGGGTC------------------------------------TTCTGGCGT---TTGATGATTGGCTCGCTAGTGATGTTGGTTGCAGGCTACATGGGTGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TCTATTGTTGGCATGTTAGGTTGGGGTTACATCCTTTATGAAATC---------------TTC------GCC---GGTGAAGCGGGTCGGGTTTCCTCCGAG------TCA---GCCCCAGCGGGAGTT---CAG---TCT---GCC---TTC---GGT---ACAATG---CGCTTGATCGTAACGGTA---------------------------------------------------------------GGGTGG---------GCGATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFLMEAGRMGG-KWRTSLTVGTLVTLVAAVHYFYMRDVWA----------AT-------GASPTVYRYVDW--------LITVPLQMVEFYFILAA---V-TVVSS-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-SIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_EF088595 [IV-Proteo4-c] E400012_env_samples_EF088595 gi|126843431|gb|EF088595| Uncultured bacterium clone E400012 putative proteorhodopsin gene, partial cds Uncultured bacterium clone E400012 putative proteorhodopsin gene, partial cds EF088595 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na Bering_Sea_surface_water_sample Arctic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTCGCCGCTACTGTGTTCTTCTTGATGGAAGCTGGCCGGATGGGCGGCAAATGGAGGACGTCGCTCACAGTTGGCGCCCTTGTCACTTTGGTTGCAGCTGTGCACTATTTCTACATGAGGGACGTCTGGGCAGCTACCGGCGCGAGCCCGACCGTTTATCGGTATGTAGACTGGCTGATAACTGTTCCGCTCCAAATGGTTGAATTCTACTTTATCCTTGCTGCAGTCACCGTAGTAAGCTCTGGGGTCTTCTGGCGTTTGATGATTGGCTCGCTAGTGATGTTGGTTGCAGGCTACATGGGTGAAGCAGGATTGGCTCCAGCATGGCCAGCATTTATTGTTGGCATGTTAGGTTGGGGTTACATCCTTTATGAAATCTTCGCCGGTGAAGCGGGTCGGGTTTCCTCCGAGTCAGCCCCAGCGGGAGTTCAGTCTGCCTTCGGTACAATGCGCTTGATCGTAACGGTAGGATGGGCGATTTATCCA MVAATVFFLMEAGRMGGKWRTSLTVGALVTLVAAVHYFYMRDVWAATGASPTVYRYVDWLITVPLQMVEFYFILAAVTVVSSGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCCGCTACTGTGTTCTTCTTGATGGAAGCTGGCCGGATGGGCGGC---AAATGGAGGACGTCGCTCACAGTTGGCGCCCTTGTCACTTTGGTTGCAGCTGTGCACTATTTCTACATGAGGGACGTCTGGGCA------------------------------GCTACC---------------------GGCGCGAGCCCGACCGTTTATCGGTATGTAGACTGG------------------------CTGATAACTGTTCCGCTCCAAATGGTTGAATTCTACTTTATCCTTGCTGCA---------GTC---ACCGTAGTAAGCTCT---GGGGTC------------------------------------TTCTGGCGT---TTGATGATTGGCTCGCTAGTGATGTTGGTTGCAGGCTACATGGGTGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTTATTGTTGGCATGTTAGGTTGGGGTTACATCCTTTATGAAATC---------------TTC------GCC---GGTGAAGCGGGTCGGGTTTCCTCCGAG------TCA---GCCCCAGCGGGAGTT---CAG---TCT---GCC---TTC---GGT---ACAATG---CGCTTGATCGTAACGGTA---------------------------------------------------------------GGATGG---------GCGATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFLMEAGRMGG-KWRTSLTVGALVTLVAAVHYFYMRDVWA----------AT-------GASPTVYRYVDW--------LITVPLQMVEFYFILAA---V-TVVSS-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_EU915894 [IV-Proteo4-c] US080228_env_samples_EU915894 gi|229358670|gb|EU915894| Uncultured microorganism clone US080228 putative proteorhodopsin gene, partial cds Uncultured microorganism clone US080228 putative proteorhodopsin gene, partial cds EU915894 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_surface_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTCGCCGCTACTGCGTTCTTCTTGATGGAAGCTGGCCGGATGGGCGGCAAATGGAGGACGTCGCTCACAGTTGGCGCCCTTGTCACTTTGGTTGCAGCTGTGCACTATTTCTACATGAGGGACGTCTGGGCAGCTACCGGCGCGAGCCCGACCGTTTATCGGTATGTAGACTGGCTGATAACTGTTCCGCTCCAAATGGTTGAATTCTACTTTATCCTTGCTGCAGTCACCGTAGTAAGCTCTGGGGTCTTCTGGCGTTTGATGATTGGCTCGCTAGTGATGTTGGTTGCAGGCTACATGGGTGAAGCAGGATTGGCTCCAGCATGGCCAGCATTTATTGTTGGCATGTTAGGTTGGGGTTACATCCTTTATGAAATCTTCGCCGGTGAAGCGGGTCGGGTTTCCTCCGAGTCAGCCCCAGCGGGAGTTCAGTCTGCCTTCGGTACAATGCGCTTGATCGTAACGGTAGGATGGGCGATCTAC MVAATAFFLMEAGRMGGKWRTSLTVGALVTLVAAVHYFYMRDVWAATGASPTVYRYVDWLITVPLQMVEFYFILAAVTVVSSGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCCGCTACTGCGTTCTTCTTGATGGAAGCTGGCCGGATGGGCGGC---AAATGGAGGACGTCGCTCACAGTTGGCGCCCTTGTCACTTTGGTTGCAGCTGTGCACTATTTCTACATGAGGGACGTCTGGGCA------------------------------GCTACC---------------------GGCGCGAGCCCGACCGTTTATCGGTATGTAGACTGG------------------------CTGATAACTGTTCCGCTCCAAATGGTTGAATTCTACTTTATCCTTGCTGCA---------GTC---ACCGTAGTAAGCTCT---GGGGTC------------------------------------TTCTGGCGT---TTGATGATTGGCTCGCTAGTGATGTTGGTTGCAGGCTACATGGGTGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTTATTGTTGGCATGTTAGGTTGGGGTTACATCCTTTATGAAATC---------------TTC------GCC---GGTGAAGCGGGTCGGGTTTCCTCCGAG------TCA---GCCCCAGCGGGAGTT---CAG---TCT---GCC---TTC---GGT---ACAATG---CGCTTGATCGTAACGGTA---------------------------------------------------------------GGATGG---------GCGATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFLMEAGRMGG-KWRTSLTVGALVTLVAAVHYFYMRDVWA----------AT-------GASPTVYRYVDW--------LITVPLQMVEFYFILAA---V-TVVSS-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_JX863196 [IV-Proteo4-c] MALINA_OTU31_349_Q_env_samples_JX863196 gi|425477342|gb|JX863196| Uncultured bacterium clone MALINA OTU31 349 Q putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU31 349 Q putative proteorhodopsin gene, partial cds JX863196 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 08-juil-09 0m_depth Pacific Ocean marine 53.36 -159.29 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGATAACTGTTCCGCTCCAAATGGTTGAATTCTACTTTATCCTTGCTGCAGTCACCGTAGTAAGCTCTGGGGTCTTCTGGCGTTTGATGATTGGCTCGCTAGTGATGTTGGTTGCAGGCTACATGGGTGAAGCAGGATTGGCTCCAGCATGGCCAGCATTTATTGTTGGCATGTTAGGTTGGGGTTACATCCTTTATGAAATCTTCGCCGGTGAAGCGGGTCGGGTTTCCTCCGAGTCAGCCCCAGCGGGAGTTCAGTCTGCCTTCGGTACAATGCGCTTGATCGTAACGGTA WLITVPLQMVEFYFILAAVTVVSSGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATAACTGTTCCGCTCCAAATGGTTGAATTCTACTTTATCCTTGCTGCA---------GTC---ACCGTAGTAAGCTCT---GGGGTC------------------------------------TTCTGGCGT---TTGATGATTGGCTCGCTAGTGATGTTGGTTGCAGGCTACATGGGTGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTTATTGTTGGCATGTTAGGTTGGGGTTACATCCTTTATGAAATC---------------TTC------GCC---GGTGAAGCGGGTCGGGTTTCCTCCGAG------TCA---GCCCCAGCGGGAGTT---CAG---TCT---GCC---TTC---GGT---ACAATG---CGCTTGATCGTAACGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLQMVEFYFILAA---V-TVVSS-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_1105085216420 [IV-Proteo4-c] JCVI_ORF_1105085216420_GS000c_Open_Ocean_5m jcvi|1105085216420| 1105085216420 JCVI ORF 1105085216420 1105085216420 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.22_0.8 other #na 25-FEB-2003 Open_Ocean/5m_depth/S_36.7_psu/GS000c/Sargasso_Stations_3/Sargasso_Sea Sargasso Sea marine 32.174835 -64.01017 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAGTTTTCTAACTGCGAGAGGCGTTAAAGCTTCTTTGGCAACAGCGGCGCTGACATTATTACCAGTAAGCGCAAATGCTGCCACAACTATGCTCCAATCTAATGACTACGTGGGCATATCTTTCTGGACTATTTCAATGGCCATGGTTGCCGCTACCGTTTTCTTCCTGATGGAAGCCGGACGGATGGGCGGTAAGTGGAAGACTTCGCTAACAGTTGGCGCGCTTGTCACTCTGGTCGCAGCTGTTCACTACTTCTACATGAGGGATGTCTGGGCCACTACTGGTGAAAGCCCAACGGTTTACCGTTATGTCGATTGGCTGATAACTGTTCCACTGCAAATGGTGGAGTTCTACTTCATTCTTGCAGCTGTAACTGTTGTAAGCTCTGGCGTCTTCTGGCGTTTGATGATTGGCTCTCTAGTAATGCTAGTAGCAGGCTACATGGGTGAAGCAGGCCTTGCCCCTGCATGGCCAGCATTCATCGTAGGCATGTTAGGATGGGGTTACATCCTGTACGAAATTTTTGCTGGTGAAGCCGGCAGAGTTTCCGCCGAGTCAGCCCCAGCTGGAGTTCAGTCAGCCTTTGGGACAATGCGCCTTATCGTCACCGTTGGATGGGCAATCTATCCGCTTGGTTACTTCCTGGGCTACCTGAATGGGTCTGTCGATGCTGTGACTTTGAACGTGATCTATAACATTGCAGACGTTATTAACAAGATCGCCTTCGTGGCATTATCTGGCGCAGCATCCCAC MSFLTARGVKASLATAALTLLPVSANAATTMLQSNDYVGISFWTISMAMVAATVFFLMEAGRMGGKWKTSLTVGALVTLVAAVHYFYMRDVWATTGESPTVYRYVDWLITVPLQMVEFYFILAAVTVVSSGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSAESAPAGVQSAFGTMRLIVTVGWAIYPLGYFLGYLNGSVDAVTLNVIYNIADVINKIAFVALSGAASH ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAGTTTTCTAACTGCGAGAGGCGTTAAAGCTTCTTTGGCAACAGCGGCGCTGACATTATTACCAGTAAGCGCAAATGCTGCCACAACTATGCTCCAATCTAATGACTACGTGGGCATATCTTTCTGGACTATTTCAATGGCCATGGTTGCCGCTACCGTTTTCTTCCTGATGGAAGCCGGACGGATGGGCGGT---AAGTGGAAGACTTCGCTAACAGTTGGCGCGCTTGTCACTCTGGTCGCAGCTGTTCACTACTTCTACATGAGGGATGTCTGGGCC------------------------------ACTACT---------------------GGTGAAAGCCCAACGGTTTACCGTTATGTCGATTGG------------------------CTGATAACTGTTCCACTGCAAATGGTGGAGTTCTACTTCATTCTTGCAGCT---------GTA---ACTGTTGTAAGCTCT---GGCGTC------------------------------------TTCTGGCGT---TTGATGATTGGCTCTCTAGTAATGCTAGTAGCAGGCTACATGGGTGAA---------GCA------------------GGC------CTT---------------------------------GCC------------------------------------------------------------------CCTGCA------------------TGGCCAGCA---TTCATCGTAGGCATGTTAGGATGGGGTTACATCCTGTACGAAATT---------------TTT------GCT---GGTGAAGCCGGCAGAGTTTCCGCCGAG------TCA---GCCCCAGCTGGAGTT---CAG---TCA---GCC---TTT---GGG---ACAATG---CGCCTTATCGTCACCGTT---------------------------------------------------------------GGATGG---------GCAATCTATCCGCTTGGTTACTTCCTGGGCTACCTG---------------------------------------AATGGGTCTGTCGATGCTGTGACTTTGAACGTGATCTATAACATTGCAGACGTTATTAACAAGATCGCCTTCGTGGCATTATCTGGCGCAGCATCCCAC------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------MSFLTARGVKASLATAALTLLPVSANAATTMLQSNDYVGISFWTISMAMVAATVFFLMEAGRMGG-KWKTSLTVGALVTLVAAVHYFYMRDVWA----------TT-------GESPTVYRYVDW--------LITVPLQMVEFYFILAA---V-TVVSS-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSAE--S-APAGV-Q-S-A-F-G-TM-RLIVTV---------------------GW---AIYPLGYFLGYL-------------NGSVDAVTLNVIYNIADVINKIAFVALSGAASH-------------------------------------------- [IV-Proteo4-c]_EU079150 [IV-Proteo4-c] NASB_38_env_samples_EU079150 gi|156106460|gb|EU079150| Uncultured organism clone NASB 38 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 38 putative proteorhodopsin gene, partial cds EU079150 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGTTATGTTGACTGGCTGATAACTGTTCCACTGCAAATGGTTGAGTTCTACTTCATTCTTGCAGCTGTCACTGTTGTAAGCTCGGGCGTCTTCTGGCGTTTGATGATTGGCTCTCTGGTAATGCTAGTAGCAGGCTACATGGGTGAAGCAGGCCTTGCCCCTGCATGGCCAGCATTCATCGTGGGCTTGTTAGGATGGGGTTACATCCTGTACGAAATTTTTGCTGGTGAAGCCGGCAGAGTTTCCGCCGAGTCAGCCCCAGCTGGAGTTCAGTCAGCCTTTGGGACAATGCGCCTTATCGTCACCGTAGGATGGGCAATATAC RYVDWLITVPLQMVEFYFILAAVTVVSSGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGLLGWGYILYEIFAGEAGRVSAESAPAGVQSAFGTMRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTATGTTGACTGG------------------------CTGATAACTGTTCCACTGCAAATGGTTGAGTTCTACTTCATTCTTGCAGCT---------GTC---ACTGTTGTAAGCTCG---GGCGTC------------------------------------TTCTGGCGT---TTGATGATTGGCTCTCTGGTAATGCTAGTAGCAGGCTACATGGGTGAA---------GCA------------------GGC------CTT---------------------------------GCC------------------------------------------------------------------CCTGCA------------------TGGCCAGCA---TTCATCGTGGGCTTGTTAGGATGGGGTTACATCCTGTACGAAATT---------------TTT------GCT---GGTGAAGCCGGCAGAGTTTCCGCCGAG------TCA---GCCCCAGCTGGAGTT---CAG---TCA---GCC---TTT---GGG---ACAATG---CGCCTTATCGTCACCGTA---------------------------------------------------------------GGATGG---------GCAATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LITVPLQMVEFYFILAA---V-TVVSS-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGLLGWGYILYEI-----F--A-GEAGRVSAE--S-APAGV-Q-S-A-F-G-TM-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_EU079151 [IV-Proteo4-c] NASB_39_env_samples_EU079151 gi|156106462|gb|EU079151| Uncultured organism clone NASB 39 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 39 putative proteorhodopsin gene, partial cds EU079151 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGTTATATTGATTGGCTGATAACTGTTCCACTACAAATGGTGGAGTTCTACTTCATTCTTGCTGCTGTCACAGTCGTCAGCTCAGGCGTCTTCTGGCGTTTGATGATTGGCTCTCTGGTAATGCTAGTAGCAGGCTACATGGGTGAAGCAGGCCTTGCCCCCGCATGGCCAGCATTCATCGTGGGCATGTTAGGATGGGGTTACATCCTGTACAAAATTTTTGCTGGTGAAGCCGGCAGAGTTTCCGCCGAGTCAGCCCCAGCTGGAGTTCAGTCAGCCTTTGGGACAATGCGCCTTATCGTCACCGTTGGATGGGCAATTTAC RYIDWLITVPLQMVEFYFILAAVTVVSSGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYKIFAGEAGRVSAESAPAGVQSAFGTMRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTATATTGATTGG------------------------CTGATAACTGTTCCACTACAAATGGTGGAGTTCTACTTCATTCTTGCTGCT---------GTC---ACAGTCGTCAGCTCA---GGCGTC------------------------------------TTCTGGCGT---TTGATGATTGGCTCTCTGGTAATGCTAGTAGCAGGCTACATGGGTGAA---------GCA------------------GGC------CTT---------------------------------GCC------------------------------------------------------------------CCCGCA------------------TGGCCAGCA---TTCATCGTGGGCATGTTAGGATGGGGTTACATCCTGTACAAAATT---------------TTT------GCT---GGTGAAGCCGGCAGAGTTTCCGCCGAG------TCA---GCCCCAGCTGGAGTT---CAG---TCA---GCC---TTT---GGG---ACAATG---CGCCTTATCGTCACCGTT---------------------------------------------------------------GGATGG---------GCAATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYFILAA---V-TVVSS-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYKI-----F--A-GEAGRVSAE--S-APAGV-Q-S-A-F-G-TM-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_EU079152 [IV-Proteo4-c] NASB_15_env_samples_EU079152 gi|156106464|gb|EU079152| Uncultured organism clone NASB 15 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 15 putative proteorhodopsin gene, partial cds EU079152 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGATACGTTGACTGGCTGATAACTGTTCCACTACAAATGGTGGAGTTCTACTTCATTCTTGCTGCTGTCACAGTCGTCAGCTCAGGCGTCTTCTGGCGTTTGATGATTGGCTCTCTGGTGATGTTAGTAGCAGGCTATATGGGTGAAGCAGGCCTTGCCCCTGCATGGCCAGCATTCATCGTGGGCTTGCTAGGATGGGGTTACATCCTGTACGAAATTTTTGCTGGTGAAGCCGGCAGAGTTTCCGCCGAGTCAGCCCCAGCTGGAGTTCAGTCAGCCTTTGGGACAATGCGCCTTATCGTCACCGTAGGATGGGCTATCTAC RYVDWLITVPLQMVEFYFILAAVTVVSSGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGLLGWGYILYEIFAGEAGRVSAESAPAGVQSAFGTMRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACGTTGACTGG------------------------CTGATAACTGTTCCACTACAAATGGTGGAGTTCTACTTCATTCTTGCTGCT---------GTC---ACAGTCGTCAGCTCA---GGCGTC------------------------------------TTCTGGCGT---TTGATGATTGGCTCTCTGGTGATGTTAGTAGCAGGCTATATGGGTGAA---------GCA------------------GGC------CTT---------------------------------GCC------------------------------------------------------------------CCTGCA------------------TGGCCAGCA---TTCATCGTGGGCTTGCTAGGATGGGGTTACATCCTGTACGAAATT---------------TTT------GCT---GGTGAAGCCGGCAGAGTTTCCGCCGAG------TCA---GCCCCAGCTGGAGTT---CAG---TCA---GCC---TTT---GGG---ACAATG---CGCCTTATCGTCACCGTA---------------------------------------------------------------GGATGG---------GCTATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LITVPLQMVEFYFILAA---V-TVVSS-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGLLGWGYILYEI-----F--A-GEAGRVSAE--S-APAGV-Q-S-A-F-G-TM-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_EU079149 [IV-Proteo4-c] NASB_79_env_samples_EU079149 gi|156106459|gb|EU079149| Uncultured organism clone NASB 79 putative proteorhodopsinlike gene, partial sequence Uncultured organism clone NASB 79 putative proteorhodopsinlike gene, partial sequence EU079149 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGGTACATAGATTGGCTGATAACTGTTCCACTACAAATGGCGGAGTTCTACTTCATTCTTGCTGCTGTCACAGTCGTCAGCTCAGGCGTCTTCTGGCGTTTGATGATTGGCTCTCTGGTAATGCTAGTAGCAGGGTATATGGGTGAAGCAGGCCTTGCCCCTGCATGGCCAGCATTCATCGTGGGCATGTTAGGATGGGGTTACATCCTGTACGAAATTTTTGCTGGTGAAGCCGGCAGAGTTTCCGCCGAGTCAGCCCCAGCTGGAGTTCAGTCAGCCTTTGGGACAATGCGCCTTATCGTCACCGTAGGCTGGGCAATATAC RYIDWLITVPLQMAEFYFILAAVTVVSSGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSAESAPAGVQSAFGTMRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTACATAGATTGG------------------------CTGATAACTGTTCCACTACAAATGGCGGAGTTCTACTTCATTCTTGCTGCT---------GTC---ACAGTCGTCAGCTCA---GGCGTC------------------------------------TTCTGGCGT---TTGATGATTGGCTCTCTGGTAATGCTAGTAGCAGGGTATATGGGTGAA---------GCA------------------GGC------CTT---------------------------------GCC------------------------------------------------------------------CCTGCA------------------TGGCCAGCA---TTCATCGTGGGCATGTTAGGATGGGGTTACATCCTGTACGAAATT---------------TTT------GCT---GGTGAAGCCGGCAGAGTTTCCGCCGAG------TCA---GCCCCAGCTGGAGTT---CAG---TCA---GCC---TTT---GGG---ACAATG---CGCCTTATCGTCACCGTA---------------------------------------------------------------GGCTGG---------GCAATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMAEFYFILAA---V-TVVSS-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSAE--S-APAGV-Q-S-A-F-G-TM-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_1105111627006 [IV-Proteo4-c] JCVI_ORF_1105111627006_GS014_Coastal_1m jcvi|1105111627006| 1105111627006 JCVI ORF 1105111627006 1105111627006 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 20-DEC-2003 Coastal/1m_depth/S_n.a/GS014/South_of_Charleston/SC/North_American_East_Coast Atlantic Ocean marine 32.506943 -79.263885 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAGTTTTCTAACTGCGAGAGGCGTTAAAGCTTCTTTGGCAACAGCGGCGCTGACATTATTACCAGTAAGCGCAAATGCTGCCACAACTATGCTCCAATCTAATGACTACGTGGGCATATCTTTCTGGACTATTTCAATGGCCATGGTTGCCGCTACCGTTTTCTTCCTTATGGAAGCCGGACGGATGGGTGGCAAATGGAGGACGTCGCTTACCGTTGGCGCCCTTGTCACTTTGGTTGCAGCTGTTCACTACTTCTACATGAGGGATGTCTGGGCATCCACCGGTGATAGCCCGACCGTCTATCGGTATGTAGATTGGCTGATAACTGTTCCGCTTCAAATGGTCGAATTCTACTTCATTCTTGCGGCTGTCACAGTCGTCAGCTCAGGCGTTTTCTGGCGTTTGATGATTGGTTCTCTTGTGATGCTCGTAGCAGGCTACATGGGCGAAGCAGGTTTGGCTCCTGCATGGCCAGCATTCATCGTGGGCATGTTAGGATGGGGTTACATTCTATATGAAATTTTTGCCGGTGAAGCTGGCAGGGTTTCCGCAGAATCAGCTCCAGCTGGGGTTCAGTCAGCCTTTGGCACTATGCGTTTGATCGTTACCGTCGGATGGGCAATCTATCCACTCGGGTACTTCTTGGGCTATCTCAATGGGTCTGTCGACGCTGTGACTTTGAACGTGATCTATAACGTCGCAGACGTTGTAAACAAGATCGCCTTCGTTGGCATTATCTGGGCTGCAGCAAACGCTGCAACTTCAGACAGCAAA MSFLTARGVKASLATAALTLLPVSANAATTMLQSNDYVGISFWTISMAMVAATVFFLMEAGRMGGKWRTSLTVGALVTLVAAVHYFYMRDVWASTGDSPTVYRYVDWLITVPLQMVEFYFILAAVTVVSSGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSAESAPAGVQSAFGTMRLIVTVGWAIYPLGYFLGYLNGSVDAVTLNVIYNVADVVNKIAFVGIIWAAANAATSDSK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAGTTTTCTAACTGCGAGAGGCGTTAAAGCTTCTTTGGCAACAGCGGCGCTGACATTATTACCAGTAAGCGCAAATGCTGCCACAACTATGCTCCAATCTAATGACTACGTGGGCATATCTTTCTGGACTATTTCAATGGCCATGGTTGCCGCTACCGTTTTCTTCCTTATGGAAGCCGGACGGATGGGTGGC---AAATGGAGGACGTCGCTTACCGTTGGCGCCCTTGTCACTTTGGTTGCAGCTGTTCACTACTTCTACATGAGGGATGTCTGGGCA------------------------------TCCACC---------------------GGTGATAGCCCGACCGTCTATCGGTATGTAGATTGG------------------------CTGATAACTGTTCCGCTTCAAATGGTCGAATTCTACTTCATTCTTGCGGCT---------GTC---ACAGTCGTCAGCTCA---GGCGTT------------------------------------TTCTGGCGT---TTGATGATTGGTTCTCTTGTGATGCTCGTAGCAGGCTACATGGGCGAA---------GCA------------------GGT------TTG---------------------------------GCT------------------------------------------------------------------CCTGCA------------------TGGCCAGCA---TTCATCGTGGGCATGTTAGGATGGGGTTACATTCTATATGAAATT---------------TTT------GCC---GGTGAAGCTGGCAGGGTTTCCGCAGAA------TCA---GCTCCAGCTGGGGTT---CAG---TCA---GCC---TTT---GGC---ACTATG---CGTTTGATCGTTACCGTC---------------------------------------------------------------GGATGG---------GCAATCTATCCACTCGGGTACTTCTTGGGCTATCTC---------------------------------------AATGGGTCTGTCGACGCTGTGACTTTGAACGTGATCTATAACGTCGCAGACGTTGTAAACAAGATCGCCTTCGTTGGCATTATCTGGGCTGCAGCAAACGCTGCA---ACTTCAGACAGCAAA------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------MSFLTARGVKASLATAALTLLPVSANAATTMLQSNDYVGISFWTISMAMVAATVFFLMEAGRMGG-KWRTSLTVGALVTLVAAVHYFYMRDVWA----------ST-------GDSPTVYRYVDW--------LITVPLQMVEFYFILAA---V-TVVSS-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSAE--S-APAGV-Q-S-A-F-G-TM-RLIVTV---------------------GW---AIYPLGYFLGYL-------------NGSVDAVTLNVIYNVADVVNKIAFVGIIWAAANAA-TSDSK------------------------------------ [IV-Proteo4-c]_EU079154 [IV-Proteo4-c] NASB_6_env_samples_EU079154 gi|156106468|gb|EU079154| Uncultured organism clone NASB 6 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 6 putative proteorhodopsin gene, partial cds EU079154 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGCTACATTGACTGGCTGATAACTGTTCCGCTTCAAATGGTCGAATTCTACTTCATTCTTGCGGCTGTCACAGTCGTCAGCTCAGGCGTTTTCTGGCGTTTGATGATTGGTTCTCTGGTGATGCTCGTAGCAGGCTACATGGGCGAAGCAGGTTTGGCTCCTGCATGGCCAGCATTCATCGTGGGCATGTTAGGATGGGGTTACATTCTATATGAAATTCTTGCCGGTGAAGCTGGCAGGGTTTCCGCAGAATCAGCTCCAGCTGGGGTTCAGTCAGCCTTTGGCACTATGCGTTTGATCGTTACCGTCGGATGGGCAATTTAT RYIDWLITVPLQMVEFYFILAAVTVVSSGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEILAGEAGRVSAESAPAGVQSAFGTMRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTACATTGACTGG------------------------CTGATAACTGTTCCGCTTCAAATGGTCGAATTCTACTTCATTCTTGCGGCT---------GTC---ACAGTCGTCAGCTCA---GGCGTT------------------------------------TTCTGGCGT---TTGATGATTGGTTCTCTGGTGATGCTCGTAGCAGGCTACATGGGCGAA---------GCA------------------GGT------TTG---------------------------------GCT------------------------------------------------------------------CCTGCA------------------TGGCCAGCA---TTCATCGTGGGCATGTTAGGATGGGGTTACATTCTATATGAAATT---------------CTT------GCC---GGTGAAGCTGGCAGGGTTTCCGCAGAA------TCA---GCTCCAGCTGGGGTT---CAG---TCA---GCC---TTT---GGC---ACTATG---CGTTTGATCGTTACCGTC---------------------------------------------------------------GGATGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYFILAA---V-TVVSS-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----L--A-GEAGRVSAE--S-APAGV-Q-S-A-F-G-TM-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_EU915903 [IV-Proteo4-c] US120208_env_samples_EU915903 gi|229358688|gb|EU915903| Uncultured microorganism clone US120208 putative proteorhodopsin gene, partial cds Uncultured microorganism clone US120208 putative proteorhodopsin gene, partial cds EU915903 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_surface_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTTGCCGCTACAGTGTTCTTCTTGATGGAAGCCGGACGGATGGGTGGCAAATGGAGGACGTCGCTTACCGTTGGCGCCCTTGTCACTTTGGTTGCAGCTGTTCACTACTTCTACATGAGGGATGTCTGGGCATCCACAGGCGCTAGCCCAACCGTTTATCGGTATGTAGATTGGCTGATAACTGTTCCACTTCAAATGGTCGAATTCTATTTTATCCTTGCGGCTGTCACCGTTGTGAGCTCAGGCGTCTTCTGGCGGTTGATGATTGGTTCGCTGGTGATGCTAGTAGCAGGCTACATGGGCGAAGCAGGTCTGGCTCCTGCGTGGCCAGCATTCATCGTGGGCATGCTGGGATGGGGTTATATCCTATACGAAATCTTTGCCGGTGAAGCTGGCAGAGTTTCCGCCGAGTCAGCTCCAGCAGGGGTTCAGTCAGCCTTTGGAACAATGCGTTTGATCGTCACCGTGGGATGGGCAATCTAT MVAATVFFLMEAGRMGGKWRTSLTVGALVTLVAAVHYFYMRDVWASTGASPTVYRYVDWLITVPLQMVEFYFILAAVTVVSSGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSAESAPAGVQSAFGTMRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACAGTGTTCTTCTTGATGGAAGCCGGACGGATGGGTGGC---AAATGGAGGACGTCGCTTACCGTTGGCGCCCTTGTCACTTTGGTTGCAGCTGTTCACTACTTCTACATGAGGGATGTCTGGGCA------------------------------TCCACA---------------------GGCGCTAGCCCAACCGTTTATCGGTATGTAGATTGG------------------------CTGATAACTGTTCCACTTCAAATGGTCGAATTCTATTTTATCCTTGCGGCT---------GTC---ACCGTTGTGAGCTCA---GGCGTC------------------------------------TTCTGGCGG---TTGATGATTGGTTCGCTGGTGATGCTAGTAGCAGGCTACATGGGCGAA---------GCA------------------GGT------CTG---------------------------------GCT------------------------------------------------------------------CCTGCG------------------TGGCCAGCA---TTCATCGTGGGCATGCTGGGATGGGGTTATATCCTATACGAAATC---------------TTT------GCC---GGTGAAGCTGGCAGAGTTTCCGCCGAG------TCA---GCTCCAGCAGGGGTT---CAG---TCA---GCC---TTT---GGA---ACAATG---CGTTTGATCGTCACCGTG---------------------------------------------------------------GGATGG---------GCAATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFLMEAGRMGG-KWRTSLTVGALVTLVAAVHYFYMRDVWA----------ST-------GASPTVYRYVDW--------LITVPLQMVEFYFILAA---V-TVVSS-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSAE--S-APAGV-Q-S-A-F-G-TM-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_EU079232 [IV-Proteo4-c] clone_A_Mtd1_002_EU079232 gi|156106623|gb|EU079232| Uncultured organism clone A Mtd1 002 putative proteorhodopsin gene, partial cds. Uncultured organism clone A Mtd1 002 putative proteorhodopsin gene, partial cds. EU079232 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic DNA other 27-FEB-2008 #na Sargasso Sea surface water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99-109 (2008) 18211270 #na CTGCAAATGGTCGAATTTTACTTCATTCTTGCGGCTGTCACCGTTGTGAGCTCGGGCGTCTTCTGGCGTTTGATGATCGGCTCTCTGGTGATGCTAGTAGCAGGCTACATGGGTGAAGCAGGGTTAGCTCCTGCATGGCCAGCATTCATCGTGGGCATGTTAGGATGGGGTTACATCCTATACGAAATTTTTGCGGTGAGGCCGGC LQMVEFYFILAAVTVVSSGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAVRP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCAAATGGTCGAATTTTACTTCATTCTTGCGGCT---------GTC---ACCGTTGTGAGCTCG---GGCGTC------------------------------------TTCTGGCGT---TTGATGATCGGCTCTCTGGTGATGCTAGTAGCAGGCTACATGGGTGAA---------GCA------------------GGG------TTA---------------------------------GCT------------------------------------------------------------------CCTGCA------------------TGGCCAGCA---TTCATCGTGGGCATGTTAGGATGGGGTTACATCCTATACGAAATT---------------TTT------GCG---GTGAGGCCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LQMVEFYFILAA---V-TVVSS-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-VRP------------------------------------------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_EU079238 [IV-Proteo4-c] clone_A_Mtd1_012_EU079238 gi|156106635|gb|EU079238| Uncultured organism clone A Mtd1 012 putative proteorhodopsin gene, partial cds. Uncultured organism clone A Mtd1 012 putative proteorhodopsin gene, partial cds. EU079238 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic DNA other 27-FEB-2008 #na Sargasso Sea surface water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99-109 (2008) 18211270 #na CTGCAAATGGTTGAATTTTACTTCATTCTTGCGGCTGTCACCGTTGTGAGCTCCGGCGTCTTCTGGCGTTTGATGATTGGTTCTCTGGTGATGCTAGTAGCAGGCTACATGGGTGAAGCAGGTCTAGCTCCTGCATGGCCAGCGTTCATCGTGGGCATGTTGGGATGGGGTTACATCCTATACGAAATCTTTGCGGTGAAGCCGGC LQMVEFYFILAAVTVVSSGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAVKP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCAAATGGTTGAATTTTACTTCATTCTTGCGGCT---------GTC---ACCGTTGTGAGCTCC---GGCGTC------------------------------------TTCTGGCGT---TTGATGATTGGTTCTCTGGTGATGCTAGTAGCAGGCTACATGGGTGAA---------GCA------------------GGT------CTA---------------------------------GCT------------------------------------------------------------------CCTGCA------------------TGGCCAGCG---TTCATCGTGGGCATGTTGGGATGGGGTTACATCCTATACGAAATC---------------TTT------GCG---GTGAAGCCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LQMVEFYFILAA---V-TVVSS-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-VKP------------------------------------------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_EU079231 [IV-Proteo4-c] clone_A_Mtd1_003_EU079231 gi|156106621|gb|EU079231| Uncultured organism clone A Mtd1 003 putative proteorhodopsin gene, partial cds. Uncultured organism clone A Mtd1 003 putative proteorhodopsin gene, partial cds. EU079231 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic DNA other 27-FEB-2008 #na Sargasso Sea surface water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99-109 (2008) 18211270 #na CTGCAAATGGTCGAATTTTACTTCATTCTTGCGGCTGTCACCGTTGTTAGCTCAGGCGTCTTCTGGCGTTTGATGATTGGTTCTCTGGTGATGCTGGTAGCAGGCTACATGGGCGAAGCAGGTTTGGCTCCTGCATGGCCAGCATTCATCGTGGGCATGTTAGGATGGGGTTACATTCTATACGAAATTTTTGCGGTGAGGCCGGC LQMVEFYFILAAVTVVSSGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAVRP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCAAATGGTCGAATTTTACTTCATTCTTGCGGCT---------GTC---ACCGTTGTTAGCTCA---GGCGTC------------------------------------TTCTGGCGT---TTGATGATTGGTTCTCTGGTGATGCTGGTAGCAGGCTACATGGGCGAA---------GCA------------------GGT------TTG---------------------------------GCT------------------------------------------------------------------CCTGCA------------------TGGCCAGCA---TTCATCGTGGGCATGTTAGGATGGGGTTACATTCTATACGAAATT---------------TTT------GCG---GTGAGGCCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LQMVEFYFILAA---V-TVVSS-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-VRP------------------------------------------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_EU079234 [IV-Proteo4-c] clone_A_Mtd1_004_EU079234 gi|156106627|gb|EU079234| Uncultured organism clone A Mtd1 004 putative proteorhodopsin gene, partial cds. Uncultured organism clone A Mtd1 004 putative proteorhodopsin gene, partial cds. EU079234 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic DNA other 27-FEB-2008 #na Sargasso Sea surface water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99-109 (2008) 18211270 #na CTGCAAATGGTTGAATTTTACTTCATTCTTGCGGCAGTCACCGTTGTAAGCTCGGGCGTGTTCTGGCGTCTGATGATTGGCTCTCTGGTAATGCTAGTAGCAGGCTATATGGGTGAAGCAGGTTTGGCTCCTGCATGGCCAGCGTTTATTGTGGGCATGCTAGGATGGGGTTACATCCTCTATGAAATTTTTGCGGTGAAGCCGGC LQMVEFYFILAAVTVVSSGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAVKP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCAAATGGTTGAATTTTACTTCATTCTTGCGGCA---------GTC---ACCGTTGTAAGCTCG---GGCGTG------------------------------------TTCTGGCGT---CTGATGATTGGCTCTCTGGTAATGCTAGTAGCAGGCTATATGGGTGAA---------GCA------------------GGT------TTG---------------------------------GCT------------------------------------------------------------------CCTGCA------------------TGGCCAGCG---TTTATTGTGGGCATGCTAGGATGGGGTTACATCCTCTATGAAATT---------------TTT------GCG---GTGAAGCCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LQMVEFYFILAA---V-TVVSS-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-VKP------------------------------------------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_EU079235 [IV-Proteo4-c] clone_A_Mtd1_005_EU079235 gi|156106629|gb|EU079235| Uncultured organism clone A Mtd1 005 putative proteorhodopsin gene, partial cds. Uncultured organism clone A Mtd1 005 putative proteorhodopsin gene, partial cds. EU079235 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic DNA other 27-FEB-2008 #na Sargasso Sea surface water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99-109 (2008) 18211270 #na CTGCAAATGGTGGAATTTTACTTCATTCTTGCGGCAGTCACCGTTGTAAGCTCGGGCGTCTTCTGGCGTCTGATGATTGGCTCTCTGGTGATGCTAGTAGCAGGCTACATGGGTGAAGCAGGTTTGGCTCCTGCATGGCCAGCGTTTATTGTGGGCATGCTAGGATGGGGTTACATCCTCTATGAAATCTTTGCGGTGAGGCCGGC LQMVEFYFILAAVTVVSSGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAVRP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCAAATGGTGGAATTTTACTTCATTCTTGCGGCA---------GTC---ACCGTTGTAAGCTCG---GGCGTC------------------------------------TTCTGGCGT---CTGATGATTGGCTCTCTGGTGATGCTAGTAGCAGGCTACATGGGTGAA---------GCA------------------GGT------TTG---------------------------------GCT------------------------------------------------------------------CCTGCA------------------TGGCCAGCG---TTTATTGTGGGCATGCTAGGATGGGGTTACATCCTCTATGAAATC---------------TTT------GCG---GTGAGGCCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LQMVEFYFILAA---V-TVVSS-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-VRP------------------------------------------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_EU079229 [IV-Proteo4-c] clone_A_Mtd1_010_EU079229 gi|156106617|gb|EU079229| Uncultured organism clone A Mtd1 010 putative proteorhodopsin gene, partial cds. Uncultured organism clone A Mtd1 010 putative proteorhodopsin gene, partial cds. EU079229 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic DNA other 27-FEB-2008 #na Sargasso Sea surface water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99-109 (2008) 18211270 #na CTGCAAATGGTGGAATTTTACTTCATCCTCGCGGCAGTCACTGTTGTGAGTTCTGGCGTCTTCTGGCGTTTAATGATTGGCTCCCTAGTGATGTTAGTAGCAGGCTACATGGGTGAAGCTGGTTTGGCGCCTGCATGGCCAGCGTTTATCGTGGGCATGCTAGGGTGGGGTTACATCCTCTATGAAATCTTTGCGGTGAGGCCGGC LQMVEFYFILAAVTVVSSGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAVRP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCAAATGGTGGAATTTTACTTCATCCTCGCGGCA---------GTC---ACTGTTGTGAGTTCT---GGCGTC------------------------------------TTCTGGCGT---TTAATGATTGGCTCCCTAGTGATGTTAGTAGCAGGCTACATGGGTGAA---------GCT------------------GGT------TTG---------------------------------GCG------------------------------------------------------------------CCTGCA------------------TGGCCAGCG---TTTATCGTGGGCATGCTAGGGTGGGGTTACATCCTCTATGAAATC---------------TTT------GCG---GTGAGGCCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LQMVEFYFILAA---V-TVVSS-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-VRP------------------------------------------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_EU079240 [IV-Proteo4-c] clone_A_Mtd1_011_EU079240 gi|156106639|gb|EU079240| Uncultured organism clone A Mtd1 011 putative proteorhodopsin gene, partial cds. Uncultured organism clone A Mtd1 011 putative proteorhodopsin gene, partial cds. EU079240 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic DNA other 27-FEB-2008 #na Sargasso Sea surface water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99-109 (2008) 18211270 #na CTGCAAATGGTGGAATTTTACTTCATTCTTGCGGCTGTCACCGTTGTAAGCTCGGGCGTCTTCTGGCGTTTGATGATTGGTTCTCTGGTGATGCTAGTAGCAGGCTACATGGGTGAAGCAGGCCTGGCTCCTGCATGGCCAGCATTCATCGTTGGCATGTTAGGATGGGGTTACATCCTATACGAAATTTTTGCGGTGAGGCCGGC LQMVEFYFILAAVTVVSSGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAVRP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCAAATGGTGGAATTTTACTTCATTCTTGCGGCT---------GTC---ACCGTTGTAAGCTCG---GGCGTC------------------------------------TTCTGGCGT---TTGATGATTGGTTCTCTGGTGATGCTAGTAGCAGGCTACATGGGTGAA---------GCA------------------GGC------CTG---------------------------------GCT------------------------------------------------------------------CCTGCA------------------TGGCCAGCA---TTCATCGTTGGCATGTTAGGATGGGGTTACATCCTATACGAAATT---------------TTT------GCG---GTGAGGCCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LQMVEFYFILAA---V-TVVSS-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-VRP------------------------------------------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_EU079233 [IV-Proteo4-c] clone_A_Mtd1_001_EU079233 gi|156106625|gb|EU079233| Uncultured organism clone A Mtd1 001 putative proteorhodopsin gene, partial cds. Uncultured organism clone A Mtd1 001 putative proteorhodopsin gene, partial cds. EU079233 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic DNA other 27-FEB-2008 #na Sargasso Sea surface water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99-109 (2008) 18211270 #na CTGCAAATGGTTGAATTCTACTTCATCCTTGCGGCTGTCACCGTTGTGAGCTCGGGCGTCTTCTGGCGTTTGATGATTGGTTCTCTCGTGATGCTAGTGGCAGGTTATATGGGTGAAGCAGGTCTGGCTCCTGCATGGCCAGCATTCATCGTGGGTATGCTAGGATGGGGTTACATCCTATACGAAATCTTTGCGGTGAAGCCGGC LQMVEFYFILAAVTVVSSGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAVKP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCAAATGGTTGAATTCTACTTCATCCTTGCGGCT---------GTC---ACCGTTGTGAGCTCG---GGCGTC------------------------------------TTCTGGCGT---TTGATGATTGGTTCTCTCGTGATGCTAGTGGCAGGTTATATGGGTGAA---------GCA------------------GGT------CTG---------------------------------GCT------------------------------------------------------------------CCTGCA------------------TGGCCAGCA---TTCATCGTGGGTATGCTAGGATGGGGTTACATCCTATACGAAATC---------------TTT------GCG---GTGAAGCCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LQMVEFYFILAA---V-TVVSS-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-VKP------------------------------------------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_EU079153 [IV-Proteo4-c] NASB_10_env_samples_EU079153 gi|156106466|gb|EU079153| Uncultured organism clone NASB 10 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 10 putative proteorhodopsin gene, partial cds EU079153 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGTTATGTTGATTGGCTGATAACTGTTCCACTTCAAATGGTCGAATTCTACTTCATTCTTGCGGCAGTCACCGTTGTAAGCTCGGGCGTCTTCTGGCGTTTGATGATTGGCTCTCTGGTGATGCTAGTAGCAGGCTACATGGGTGAAGCAGGTTTGGCTCCTGCATGGCCAGCGTTTATCGTAGGCTTATTAGGGTGGGGTTACATCCTCTATGAAATCTTTGCCGGTGAAGCTGGCCGAGTTTCGGCCGAGTCAGCCCCCGCAGGAGTCCAGTCAGCCTTTGGGACAATGCGCTTAATTGTGACTGTAGGATGGGCAATATAC RYVDWLITVPLQMVEFYFILAAVTVVSSGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGLLGWGYILYEIFAGEAGRVSAESAPAGVQSAFGTMRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTATGTTGATTGG------------------------CTGATAACTGTTCCACTTCAAATGGTCGAATTCTACTTCATTCTTGCGGCA---------GTC---ACCGTTGTAAGCTCG---GGCGTC------------------------------------TTCTGGCGT---TTGATGATTGGCTCTCTGGTGATGCTAGTAGCAGGCTACATGGGTGAA---------GCA------------------GGT------TTG---------------------------------GCT------------------------------------------------------------------CCTGCA------------------TGGCCAGCG---TTTATCGTAGGCTTATTAGGGTGGGGTTACATCCTCTATGAAATC---------------TTT------GCC---GGTGAAGCTGGCCGAGTTTCGGCCGAG------TCA---GCCCCCGCAGGAGTC---CAG---TCA---GCC---TTT---GGG---ACAATG---CGCTTAATTGTGACTGTA---------------------------------------------------------------GGATGG---------GCAATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LITVPLQMVEFYFILAA---V-TVVSS-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGLLGWGYILYEI-----F--A-GEAGRVSAE--S-APAGV-Q-S-A-F-G-TM-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_DQ926984 [IV-Proteo4-c] clone_PF91002_DQ926984 gi|116294083|gb|DQ926984| Uncultured bacterium clone PF91002 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF91002 putative proteorhodopsin gene, partial cds. DQ926984 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGGTGGCCGCTACTGCATTCTTCTTGATGGAAGCAGGACGGATGGGTGGTAAATGGAGGACGTCGCTTACAGTAGGCGCCCTCGTCACATTGGTTGCAGCTGTTCACTACTTCTACATGAGGGATGTCTGGGCATCCACCGGCGAAAGCCCGACTGTTTACCGGTATGTAGACTGGTTAATAACTGTTCCACTTCAGATGGTCGAATTCTATTTCATTCTTGCGGCTGTTACCGTTGTAAGTTCAGGCGTTTTCTGGCGTTTAATGATTGGTTCGCTAGTGATGCTGGTAGCAGGTTACATGGGTGAAGCAGGTTTGGCTCCTGCATGGCCAGCGTTCATCGTGGGCATGTTAGGGTGGGGCTACATCTTGTACGAAATCTTTGCCGGTGAAGCTGGCAGGGTCTCGGCCGAGTCGGCTCCAGCAGGCGTACAGTCCGCCTTTGGTACAATGCGTTTGATCGTCACTGTCGGGTGGGCCATCTATCCA MVAATAFFLMEAGRMGGKWRTSLTVGALVTLVAAVHYFYMRDVWASTGESPTVYRYVDWLITVPLQMVEFYFILAAVTVVSSGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSAESAPAGVQSAFGTMRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCATTCTTCTTGATGGAAGCAGGACGGATGGGTGGT---AAATGGAGGACGTCGCTTACAGTAGGCGCCCTCGTCACATTGGTTGCAGCTGTTCACTACTTCTACATGAGGGATGTCTGGGCA------------------------------TCCACC---------------------GGCGAAAGCCCGACTGTTTACCGGTATGTAGACTGG------------------------TTAATAACTGTTCCACTTCAGATGGTCGAATTCTATTTCATTCTTGCGGCT---------GTT---ACCGTTGTAAGTTCA---GGCGTT------------------------------------TTCTGGCGT---TTAATGATTGGTTCGCTAGTGATGCTGGTAGCAGGTTACATGGGTGAA---------GCA------------------GGT------TTG---------------------------------GCT------------------------------------------------------------------CCTGCA------------------TGGCCAGCG---TTCATCGTGGGCATGTTAGGGTGGGGCTACATCTTGTACGAAATC---------------TTT------GCC---GGTGAAGCTGGCAGGGTCTCGGCCGAG------TCG---GCTCCAGCAGGCGTA---CAG---TCC---GCC---TTT---GGT---ACAATG---CGTTTGATCGTCACTGTC---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFLMEAGRMGG-KWRTSLTVGALVTLVAAVHYFYMRDVWA----------ST-------GESPTVYRYVDW--------LITVPLQMVEFYFILAA---V-TVVSS-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSAE--S-APAGV-Q-S-A-F-G-TM-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_1105075316287 [IV-Proteo4-c] JCVI_ORF_1105075316287_GS035_Coastal_2m jcvi|1105075316287| 1105075316287 JCVI ORF 1105075316287 1105075316287 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 01-mars-04 Coastal/2m_depth/S_34.5_psu/GS035/Wolf_Island/Galapagos_Islands Pacific Ocean marine 1.3891667 -91.81695 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf CTGATGAGTTTTCTAACTGCAAGAGGCGTAAAAGCTTCTTTGGCAACAGCGGCGCTGACATTACTACCAGTAAGCGCAAATGCTGCCACAACTATGCTCCAATCGAATGACTACGTGGGCATATCTTTTTGGACTATTTCAATGGCCATGGTTGCCGCTACCGTTTTCTTCCTTATGGAAGCCGGACGGATGGGTGGCAAATGGAGGACGTCGCTTACAGTTGGCGCCCTCGTGACATTGGTTGCAGCTGTTCACTACTTCTACATGAGGGATGTTTGGGCATCCACCGGCGCAAGCCCGACAGTGTATCGGTATGTTGACTGGTTGATAACCGTTCCGCTTCAAATGGTCGAATTCTACTTCATTCTTGCAGCGGTCACCGTTGTAAGTTCGGGCGTCTTCTGGCGTTTGATGATTGGCTCTCTAGTAATGCTAGTAGCGGGCTACATGGGTGAAGCAGGATTGGCTCCTGCATGGCCAGCGTTTATCGTAGGCATGCTTGGATGGGGCTACATCCTTTACGAAATCTTTGCCGGTGAAGCCGGTAGAGTTTCCGCCGAATCAGCTCCGGCTGGGGTCCAGTCAGCCTTCGGAACAATGCGCTTGATCGTCACTGTAGGGTGGGCGATCTACCCGCTTGGTTACTTCTTAGGCTACCTGAATGGGTCTGTCGACGCTGTGACTTTAAACGTGATCTACAACGTTGCAGACGTTGTGAACAAGATCGCCTTCGTTGGCATCATCTGGGCTGCAGCAAATGCTGCAACCTCAGCAAGCAAG LMSFLTARGVKASLATAALTLLPVSANAATTMLQSNDYVGISFWTISMAMVAATVFFLMEAGRMGGKWRTSLTVGALVTLVAAVHYFYMRDVWASTGASPTVYRYVDWLITVPLQMVEFYFILAAVTVVSSGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSAESAPAGVQSAFGTMRLIVTVGWAIYPLGYFLGYLNGSVDAVTLNVIYNVADVVNKIAFVGIIWAAANAATSASK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGAGTTTTCTAACTGCAAGAGGCGTAAAAGCTTCTTTGGCAACAGCGGCGCTGACATTACTACCAGTAAGCGCAAATGCTGCCACAACTATGCTCCAATCGAATGACTACGTGGGCATATCTTTTTGGACTATTTCAATGGCCATGGTTGCCGCTACCGTTTTCTTCCTTATGGAAGCCGGACGGATGGGTGGC---AAATGGAGGACGTCGCTTACAGTTGGCGCCCTCGTGACATTGGTTGCAGCTGTTCACTACTTCTACATGAGGGATGTTTGGGCA------------------------------TCCACC---------------------GGCGCAAGCCCGACAGTGTATCGGTATGTTGACTGG------------------------TTGATAACCGTTCCGCTTCAAATGGTCGAATTCTACTTCATTCTTGCAGCG---------GTC---ACCGTTGTAAGTTCG---GGCGTC------------------------------------TTCTGGCGT---TTGATGATTGGCTCTCTAGTAATGCTAGTAGCGGGCTACATGGGTGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCTGCA------------------TGGCCAGCG---TTTATCGTAGGCATGCTTGGATGGGGCTACATCCTTTACGAAATC---------------TTT------GCC---GGTGAAGCCGGTAGAGTTTCCGCCGAA------TCA---GCTCCGGCTGGGGTC---CAG---TCA---GCC---TTC---GGA---ACAATG---CGCTTGATCGTCACTGTA---------------------------------------------------------------GGGTGG---------GCGATCTACCCGCTTGGTTACTTCTTAGGCTACCTG---------------------------------------AATGGGTCTGTCGACGCTGTGACTTTAAACGTGATCTACAACGTTGCAGACGTTGTGAACAAGATCGCCTTCGTTGGCATCATCTGGGCTGCAGCAAATGCTGCA---ACCTCAGCAAGCAAG------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------LMSFLTARGVKASLATAALTLLPVSANAATTMLQSNDYVGISFWTISMAMVAATVFFLMEAGRMGG-KWRTSLTVGALVTLVAAVHYFYMRDVWA----------ST-------GASPTVYRYVDW--------LITVPLQMVEFYFILAA---V-TVVSS-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSAE--S-APAGV-Q-S-A-F-G-TM-RLIVTV---------------------GW---AIYPLGYFLGYL-------------NGSVDAVTLNVIYNVADVVNKIAFVGIIWAAANAA-TSASK------------------------------------ [IV-Proteo4-c]_EU916078 [IV-Proteo4-c] clone_A150011_EU916078 gi|229359037|gb|EU916078| Uncultured bacterium clone A150011 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A150011 putative proteorhodopsin gene, partial cds. EU916078 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTAGCCGCTACTGTATTCTTCTTCATGGAAGCTGCGCGTATGGGTGGTAAGTGGAGGACGTCACTAACGGTTGGTGCTCTTGTCACTTTAGTTGCAGCGGTTCACTATTTCTACATGAGAGATGTATGGGTTGGTGCCACACCAACCGTTTATCGGTATGTAGATTGGTTAATTACCGTTCCTCTACAAATGGTGGAATTCTACTTTATCCTAGCTGCAGTAGTTGTCAGTTCCGGAGTCTTCTGGCGCTTGATGGTCGGCTCACTAGCTATGTTGATAGCTGGTTATATGGGTGAAGCAGGCCTTGCACCAGCGTGGCCAGCATTTATCGTTGGTATGCTCGGATGGGGTTACATCTTGTATGAAATCTTTCTTGGTGAAGCTGGCAAGGTTTCTTCAGAGTCAGCACCAGCAGGGGTTCAGTCAGCCTTTGGAACAATGCGTCTAATTGTTACAGTGGGGTGGGCTATCTAT MVAATVFFFMEAARMGGKWRTSLTVGALVTLVAAVHYFYMRDVWVGATPTVYRYVDWLITVPLQMVEFYFILAAVVVSSGVFWRLMVGSLAMLIAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFLGEAGKVSSESAPAGVQSAFGTMRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTATTCTTCTTCATGGAAGCTGCGCGTATGGGTGGT---AAGTGGAGGACGTCACTAACGGTTGGTGCTCTTGTCACTTTAGTTGCAGCGGTTCACTATTTCTACATGAGAGATGTATGGGTT---------------------------------------------------------GGTGCCACACCAACCGTTTATCGGTATGTAGATTGG------------------------TTAATTACCGTTCCTCTACAAATGGTGGAATTCTACTTTATCCTAGCTGCA---------GTA------GTTGTCAGTTCC---GGAGTC------------------------------------TTCTGGCGC---TTGATGGTCGGCTCACTAGCTATGTTGATAGCTGGTTATATGGGTGAA---------GCA------------------GGC------CTT---------------------------------GCA------------------------------------------------------------------CCAGCG------------------TGGCCAGCA---TTTATCGTTGGTATGCTCGGATGGGGTTACATCTTGTATGAAATC---------------TTT------CTT---GGTGAAGCTGGCAAGGTTTCTTCAGAG------TCA---GCACCAGCAGGGGTT---CAG---TCA---GCC---TTT---GGA---ACAATG---CGTCTAATTGTTACAGTG---------------------------------------------------------------GGGTGG---------GCTATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMEAARMGG-KWRTSLTVGALVTLVAAVHYFYMRDVWV-------------------GATPTVYRYVDW--------LITVPLQMVEFYFILAA---V--VVSS-GV------------FWR-LMVGSLAMLIAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--L-GEAGKVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_EU079161 [IV-Proteo4-c] NASB_61_env_samples_EU079161 gi|156106482|gb|EU079161| Uncultured organism clone NASB 61 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 61 putative proteorhodopsin gene, partial cds EU079161 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGGTACGTTGACTGGTTAATCACTGTGCCGCTGCAGATGGTTGAATTCTACTTCATCCTGGCAGCAGTCACCGCAGTAAGTGCTGGTATCTTCTGGCGCCTGTTGATTGGTTCACTGGTAATGCTTGTGGCTGGTTATATGGGTGAAGCAGGCCTGATTAATGCGTGGGCCGGTTTTATCGTTGGCCTGTTGGGATGGGCGTACATCTTGTATGAAATCTTTGCTGGCGAAGCCGGGCGTGTTTCAGCTGAAAAGGCCCCGGCGGCGGTTCAGAGTGCGTTTGGCACAATGAGGTTGATCGTAACCATTGGATGGGCAATATAT RYVDWLITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYMGEAGLINAWAGFIVGLLGWAYILYEIFAGEAGRVSAEKAPAAVQSAFGTMRLIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTACGTTGACTGG------------------------TTAATCACTGTGCCGCTGCAGATGGTTGAATTCTACTTCATCCTGGCAGCA---------GTC---ACCGCAGTAAGTGCT---GGTATC------------------------------------TTCTGGCGC---CTGTTGATTGGTTCACTGGTAATGCTTGTGGCTGGTTATATGGGTGAA---------GCA------------------GGC------CTG---------------------------------ATT------------------------------------------------------------------AATGCG------------------TGGGCCGGT---TTTATCGTTGGCCTGTTGGGATGGGCGTACATCTTGTATGAAATC---------------TTT------GCT---GGCGAAGCCGGGCGTGTTTCAGCTGAA------AAG---GCCCCGGCGGCGGTT---CAG---AGT---GCG---TTT---GGC---ACAATG---AGGTTGATCGTAACCATT---------------------------------------------------------------GGATGG---------GCAATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYMGE---A------G--L-----------I----------------------NA------WAG-FIVGLLGWAYILYEI-----F--A-GEAGRVSAE--K-APAAV-Q-S-A-F-G-TM-RLIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_EU915724 [IV-Proteo4-b] APF9050_env_samples_EU915724 gi|229358330|gb|EU915724| Uncultured microorganism clone APF9050 putative proteorhodopsin gene, partial cds Uncultured microorganism clone APF9050 putative proteorhodopsin gene, partial cds EU915724 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample_at_75_m_depth Atlantic Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTAGCCGCTACAGTTTTCTTCTTCCTAGAAACTAACAACGTATCAGGTAAGTGGAAGACATCTCTTGCGCTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTACATGAGAGAAGTATGGGTAACAACAGGTGATACACCTACTGTTTACAGATATGTTGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCAGTTGCTGCAGTGTCAGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGCTTCATCAACGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTGACAAATGTCCTGCAGCTGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACAGTTGGTTGGGCAATCTAC MVAATVFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGDTPTVYRYVDWLITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACAGTTTTCTTCTTCCTAGAAACTAACAACGTATCAGGT---AAGTGGAAGACATCTCTTGCGCTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTACATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGATACACCTACTGTTTACAGATATGTTGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCA---------GTT---GCTGCAGTGTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTGAC------AAA---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCAATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GDTPTVYRYVDW--------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_EF088517 [IV-Proteo4-b] clone_APF9050_EF088517 gi|126843251|gb|EF088517| Uncultured bacterium clone APF9050 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone APF9050 putative proteorhodopsin gene, partial cds. EF088517 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na 75m water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTAGCCGCTACAGTTTTCTTCTTCCTAGAAACTAACAACGTATCAGGTAAGTGGAAGACATCTCTTGCGCTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTACATGAGAGAAGTATGGGTAACAACAGGTGATACACCTACTGTTTACAGATATGTTGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCAGTTGCTGCAGTGTCAGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGCTTCATCAACGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTGACAAATGTCCTGCAGCTGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACAGTTGGTTGGGCAATCTACCCA MVAATVFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGDTPTVYRYVDWLITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACAGTTTTCTTCTTCCTAGAAACTAACAACGTATCAGGT---AAGTGGAAGACATCTCTTGCGCTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTACATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGATACACCTACTGTTTACAGATATGTTGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCA---------GTT---GCTGCAGTGTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTGAC------AAA---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GDTPTVYRYVDW--------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_EU915777 [IV-Proteo4-b] PF97521_env_samples_EU915777 gi|229358436|gb|EU915777| Uncultured microorganism clone PF97521 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF97521 putative proteorhodopsin gene, partial cds EU915777 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGTTTTCTTCTTCCTAGAAACTAACAACGTATCAGGTAAGTGGAAGACATCTCTTGCGCTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTAACAACAGGTGATACACCTACTGTTTATAGATATGTTGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCAGTTGCTGCAGTGTCAGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGATTATGCTGGTGAAGCTGGCTTCACCAACGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTGACAAATGTCCTGCAGCTGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACAGTTGGTTGGGCCATCTAC MVAATVFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGDTPTVYRYVDWLITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVADYAGEAGFTNAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTTTTCTTCTTCCTAGAAACTAACAACGTATCAGGT---AAGTGGAAGACATCTCTTGCGCTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGATACACCTACTGTTTATAGATATGTTGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCA---------GTT---GCTGCAGTGTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGATTATGCTGGTGAA---------GCT------------------GGC------TTC---------------------------------ACC------------------------------------------------------------------AACGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTGAC------AAA---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GDTPTVYRYVDW--------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVADYAGE---A------G--F-----------T----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_EU224305 [IV-Proteo4-b] clone_1812207_EU224305 gi|164698782|gb|EU224305| Uncultured bacterium clone 1812207 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 1812207 putative proteorhodopsin gene, partial cds. EU224305 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2008 #na surface water sample Indian Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGGTGGCCGCTACTGCTTTCTTCTTCCTAGAAACTAACAACGTATCAGGTAAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTAACAACAGGTGATACACCTACTGTTTATAGATATGTTGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTCTACATAATCCTTGCTGCAGTTGCTGCAGTGTCAGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCCGGCTTCATCAACGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTGACAAATGTCCTGCAGCTGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACGGTTGGGTGGGCCATCTACCCA MVAATAFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGDTPTVYRYVDWLITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCTTTCTTCTTCCTAGAAACTAACAACGTATCAGGT---AAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGATACACCTACTGTTTATAGATATGTTGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTCTACATAATCCTTGCTGCA---------GTT---GCTGCAGTGTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCC------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTGAC------AAA---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACGGTT---------------------------------------------------------------GGGTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GDTPTVYRYVDW--------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_DQ927009 [IV-Proteo4-b] clone_PF91138_DQ927009 gi|116294133|gb|DQ927009| Uncultured bacterium clone PF91138 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF91138 putative proteorhodopsin gene, partial cds. DQ927009 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGGTGGCCGCTACTGCGTTCTTCTTCCTAGAAACTAACAACGTATCAGGTAAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTAACAACAGGTGATACACCTACTGTTTATAGATATGTTGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCAGTTGCTGCAGTTTCAGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGCTTCATCAACGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTGACAAATGTCCTGCAGCTGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACAGTTGGGTGGGCAATCTACCCA MVAATAFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGDTPTVYRYVDWLITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCGTTCTTCTTCCTAGAAACTAACAACGTATCAGGT---AAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGATACACCTACTGTTTATAGATATGTTGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCA---------GTT---GCTGCAGTTTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTGAC------AAA---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACAGTT---------------------------------------------------------------GGGTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GDTPTVYRYVDW--------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_DQ927035 [IV-Proteo4-b] clone_AT06034_DQ927035 gi|116294185|gb|DQ927035| Uncultured bacterium clone AT06034 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT06034 putative proteorhodopsin gene, partial cds. DQ927035 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGGTGGCCGCTACAGTATTCTTCTTCCTAGAAACTAACAACGTATCAGGTAAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTAACAACAGGTGATACACCTACTGTTTATAGATATGTTGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCAGTTGCTGCAGTGTCAGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGCTTCATCAACGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTGACAAATGTCCTGCAGCTGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACAGTTGGTTGGGCCATCTACCCA MVAATVFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGDTPTVYRYVDWLITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACAGTATTCTTCTTCCTAGAAACTAACAACGTATCAGGT---AAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGATACACCTACTGTTTATAGATATGTTGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCA---------GTT---GCTGCAGTGTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTGAC------AAA---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GDTPTVYRYVDW--------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_EF100811 [IV-Proteo4-b] clone_ID29058_EF100811 gi|126513401|gb|EF100811| Uncultured bacterium clone ID29058 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID29058 putative proteorhodopsin gene, partial cds. EF100811 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-nov-07 #na surface water Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGGTGGCCGCTACTGTGTTCTTCTTCCTAGAAACTAACAACGTATCAGGTAAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTAACAACAGGTGATACACCTACTGTTTATAGATATGTTGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCAGTTGCTGCAGTGTCAGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGCTTCATCAACGCATGGGCAGGATTCATCGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTGACAAATGTCCTGCAGCTGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACAGTTGGTTGGGCTATCTACCCA MVAATVFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGDTPTVYRYVDWLITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTGTTCTTCTTCCTAGAAACTAACAACGTATCAGGT---AAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGATACACCTACTGTTTATAGATATGTTGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCA---------GTT---GCTGCAGTGTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGA---TTCATCGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTGAC------AAA---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GDTPTVYRYVDW--------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_EF100814 [IV-Proteo4-b] clone_ID29061_EF100814 gi|126513407|gb|EF100814| Uncultured bacterium clone ID29061 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID29061 putative proteorhodopsin gene, partial cds. EF100814 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-nov-07 #na surface water Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGGTAGCCGCTACTGTGTTCTTCTTCCTAGAAACTAACAACGTATCAGGTAAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTAACAACAGGTGATACACCTACTGTTTATAGATATGTTGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCAGTTGCTGCAGTGTCAGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGTTTCATCAACGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTGACAAATGTCCTGCAGCTGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACAGTTGGTTGGGCGATCTACCCA MVAATVFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGDTPTVYRYVDWLITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTGTTCTTCTTCCTAGAAACTAACAACGTATCAGGT---AAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGATACACCTACTGTTTATAGATATGTTGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCA---------GTT---GCTGCAGTGTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGT------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTGAC------AAA---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCGATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GDTPTVYRYVDW--------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_EF088628 [IV-Proteo4-b] PF13003_env_samples_EF088628 gi|126843506|gb|EF088628| Uncultured bacterium clone PF13003 putative proteorhodopsin gene, partial cds Uncultured bacterium clone PF13003 putative proteorhodopsin gene, partial cds EF088628 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na surface_water_sample Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTGGCCGCTACTGTATTCTTCTTAGAAACTAACAACGTATCAGGTAAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTAACAACAGGTGATACACCTACTGTTTATAGATATGTTGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCAGTTGCTGCAGTGTCAGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGCTTCATCAACGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTGACAAATGTCCTGCAGCTGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACAGCTGGTTGGGCGATTTACCCA MVAATVFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGDTPTVYRYVDWLITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTAGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTA---TTCTTCTTAGAAACTAACAACGTATCAGGT---AAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGATACACCTACTGTTTATAGATATGTTGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCA---------GTT---GCTGCAGTGTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTGAC------AAA---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACAGCT---------------------------------------------------------------GGTTGG---------GCGATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATV-FFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GDTPTVYRYVDW--------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTA---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_EU224306 [IV-Proteo4-b] clone_1812208_EU224306 gi|164698784|gb|EU224306| Uncultured bacterium clone 1812208 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 1812208 putative proteorhodopsin gene, partial cds. EU224306 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2008 #na surface water sample Indian Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGGTAGCCGCTACTGTATTCTTCTTCCTAGAAACTAACAACGTATCAGGTAAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTAACAACAGGTGATACACCTACTGTTTATAGATATGTTGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCAGTTGCTGCAGTGTCAGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGTTTCATCAACGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTGACAAATGTCCTGCAGCTGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACAGTTGGGTGGGCAATTTACCCA MVAATVFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGDTPTVYRYVDWLITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTATTCTTCTTCCTAGAAACTAACAACGTATCAGGT---AAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGATACACCTACTGTTTATAGATATGTTGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCA---------GTT---GCTGCAGTGTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGT------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTGAC------AAA---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACAGTT---------------------------------------------------------------GGGTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GDTPTVYRYVDW--------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_DQ927029 [IV-Proteo4-b] clone_AT06023_DQ927029 gi|116294173|gb|DQ927029| Uncultured bacterium clone AT06023 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT06023 putative proteorhodopsin gene, partial cds. DQ927029 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGGTAGCCGCTACAGCGTTCTTCTTCCTAGAAACTAACAACGTATCAGGTAAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTAACAACAGGTGATACACCTACTGTTTATAGATATGTTGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCAGTTGCTGCAGTGTCAGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGTTTCATCAACGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTGACAAATGTCCTGCAGCTGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACAGTTGGTTGGGCAATTTACCCA MVAATAFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGDTPTVYRYVDWLITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACAGCGTTCTTCTTCCTAGAAACTAACAACGTATCAGGT---AAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGATACACCTACTGTTTATAGATATGTTGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCA---------GTT---GCTGCAGTGTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGT------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTGAC------AAA---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GDTPTVYRYVDW--------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_EF100815 [IV-Proteo4-b] clone_ID29063_EF100815 gi|126513409|gb|EF100815| Uncultured bacterium clone ID29063 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID29063 putative proteorhodopsin gene, partial cds. EF100815 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-nov-07 #na surface water Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGGTGGCCGCTACTGTCTTCTTCTTCCTAGAAACTAACAACGTATCAGGTAAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTAACAACAGGTGATACACCTACTGTTTATAGATATGTTGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCAGTTGCTGCAGTGTCAGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGCTTCATCAACGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTAGGGTGGGCTATCTACCCA MVAATVFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGDTPTVYRYVDWLITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAAKSGNKALVTAFGAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTCTTCTTCTTCCTAGAAACTAACAACGTATCAGGT---AAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGATACACCTACTGTTTATAGATATGTTGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCA---------GTT---GCTGCAGTGTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA---------------------------------------------------------------GGGTGG---------GCTATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GDTPTVYRYVDW--------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_EF088620 [IV-Proteo4-b] PF13021_env_samples_EF088620 gi|126843490|gb|EF088620| Uncultured bacterium clone PF13021 putative proteorhodopsin gene, partial cds Uncultured bacterium clone PF13021 putative proteorhodopsin gene, partial cds EF088620 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na surface_water_sample Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTTGCCGCTACTGCATTCTTCTTCCTAGAAACTAACAACGTATCAGGTAAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTAACAACAGGTGATACACCTACTGTTTATAGATATGTTGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCAGTTGCTGCAGTGTCAGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGCTTCATCAACGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTGACAAATGTCCTGCAGCTGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACAGTTGGTTGGGCGATATATCCA MVAATAFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGDTPTVYRYVDWLITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGCATTCTTCTTCCTAGAAACTAACAACGTATCAGGT---AAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGATACACCTACTGTTTATAGATATGTTGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCA---------GTT---GCTGCAGTGTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTGAC------AAA---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCGATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GDTPTVYRYVDW--------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_EF088626 [IV-Proteo4-b] PF13030_env_samples_EF088626 gi|126843502|gb|EF088626| Uncultured bacterium clone PF13030 putative proteorhodopsin gene, partial cds Uncultured bacterium clone PF13030 putative proteorhodopsin gene, partial cds EF088626 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na surface_water_sample Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTGGCCGCTACTGCTTTCTTCTTCCTAGAAACTAACAACGTATCAGGTAAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTAACAACAGGTGATACACCTACTGTTTATAGATATGTTGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCAGTTGCTGCAGTGTCAGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGCTTCATCAACGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTGACAAATGTCCTGCAGCTGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACAGTTGGCTGGGCCATATATCCA MVAATAFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGDTPTVYRYVDWLITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCTTTCTTCTTCCTAGAAACTAACAACGTATCAGGT---AAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGATACACCTACTGTTTATAGATATGTTGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCA---------GTT---GCTGCAGTGTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTGAC------AAA---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACAGTT---------------------------------------------------------------GGCTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GDTPTVYRYVDW--------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_EF100793 [IV-Proteo4-b] clone_ID29013_EF100793 gi|126513365|gb|EF100793| Uncultured bacterium clone ID29013 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID29013 putative proteorhodopsin gene, partial cds. EF100793 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-nov-07 #na surface water Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGGTAGCCGCTACTGCATTCTTCTTCCTAGAAACTAACAATGTATCAGGTAAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTAACAACAGGTGATACACCTACTGTTTATAGATATGTTGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCAGTTGCTGCAGTGTCAGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGCTTCATCAACGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTGACAAATGTCCTGCAGCTGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACAGTTGGTTGGGCCATATATCCA MVAATAFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGDTPTVYRYVDWLITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGCATTCTTCTTCCTAGAAACTAACAATGTATCAGGT---AAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGATACACCTACTGTTTATAGATATGTTGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCA---------GTT---GCTGCAGTGTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTGAC------AAA---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GDTPTVYRYVDW--------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_EF088645 [IV-Proteo4-b] PF13038_env_samples_EF088645 gi|126843540|gb|EF088645| Uncultured bacterium clone PF13038 putative proteorhodopsin gene, partial cds Uncultured bacterium clone PF13038 putative proteorhodopsin gene, partial cds EF088645 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na surface_water_sample Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTTGCCGCTACTGCATTCTTCTTCCTAGAAACTAACAACGTATCAGGTAAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCTGCAGTACACTACTTCTATATGAGAGAAGTATGGGTAACAACAGGTGATACACCTACTGTTTATAGATATGTTGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCAGTTGCTGCAGTGTCAGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGCTTCATCAACGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTGACAAATGTCCTGCAGCTGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACAGTTGGTTGGGCTATTTAC MVAATAFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGDTPTVYRYVDWLITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGCATTCTTCTTCCTAGAAACTAACAACGTATCAGGT---AAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCTGCAGTACACTACTTCTATATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGATACACCTACTGTTTATAGATATGTTGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCA---------GTT---GCTGCAGTGTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTGAC------AAA---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GDTPTVYRYVDW--------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_EU915722 [IV-Proteo4-b] APF9038_env_samples_EU915722 gi|229358326|gb|EU915722| Uncultured microorganism clone APF9038 putative proteorhodopsin gene, partial cds Uncultured microorganism clone APF9038 putative proteorhodopsin gene, partial cds EU915722 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample_at_75_m_depth Atlantic Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGCATTCTTCTTTCTAGAAACTAACAACGTATCAGGTAAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTACATGAGAGAAGTATGGGTAACAACAGGTGATACACCTACTGTTTATAGATATGTTGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCAGTTGCTGCAGTGTCAGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGCTTCATCAACGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTGACAAATGTCCTGCAGCTGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACAGTTGGTTGGGCTATTTAC MVAATAFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGDTPTVYRYVDWLITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCATTCTTCTTTCTAGAAACTAACAACGTATCAGGT---AAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTACATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGATACACCTACTGTTTATAGATATGTTGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCA---------GTT---GCTGCAGTGTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTGAC------AAA---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GDTPTVYRYVDW--------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_EF088515 [IV-Proteo4-b] clone_APF9038_EF088515 gi|126843247|gb|EF088515| Uncultured bacterium clone APF9038 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone APF9038 putative proteorhodopsin gene, partial cds. EF088515 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na 75m water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTGGCCGCTACTGCATTCTTCTTTCTAGAAACTAACAACGTATCAGGTAAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTACATGAGAGAAGTATGGGTAACAACAGGTGATACACCTACTGTTTATAGATATGTTGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCAGTTGCTGCAGTGTCAGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGCTTCATCAACGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTGACAAATGTCCTGCAGCTGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACAGTTGGTTGGGCTATTTACCCA MVAATAFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGDTPTVYRYVDWLITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCATTCTTCTTTCTAGAAACTAACAACGTATCAGGT---AAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTACATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGATACACCTACTGTTTATAGATATGTTGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCA---------GTT---GCTGCAGTGTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTGAC------AAA---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GDTPTVYRYVDW--------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_EF088631 [IV-Proteo4-b] PF13007_env_samples_EF088631 gi|126843512|gb|EF088631| Uncultured bacterium clone PF13007 putative proteorhodopsin gene, partial cds Uncultured bacterium clone PF13007 putative proteorhodopsin gene, partial cds EF088631 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na surface_water_sample Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTCGCCGCTACTGTTTTCTTCTTTCTAGAAACTAACAACGTATCAGGTAAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTAACAACAGGTGATACACCTACTGTTTATAGATATGTTGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCAGTTGCTGCAGTGTCTGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGCTTCATCAACGCATGGGCAGGGTTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTGACAAATGTCCTGCAGCTGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACAGTTGGATGGGCAATATATCCA MVAATVFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGDTPTVYRYVDWLITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCCGCTACTGTTTTCTTCTTTCTAGAAACTAACAACGTATCAGGT---AAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGATACACCTACTGTTTATAGATATGTTGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCA---------GTT---GCTGCAGTGTCTGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGG---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTGAC------AAA---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACAGTT---------------------------------------------------------------GGATGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GDTPTVYRYVDW--------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_EF088640 [IV-Proteo4-b] PF13032_env_samples_EF088640 gi|126843530|gb|EF088640| Uncultured bacterium clone PF13032 putative proteorhodopsin gene, partial cds Uncultured bacterium clone PF13032 putative proteorhodopsin gene, partial cds EF088640 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na surface_water_sample Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTAGCCGCTACTGCTTTCTTCTTTCTAGAAACTAACAACGTATCAGGTAAGTGGAAGACACCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTAACAACAGGTGATACACCTACTGTTTATAGATATGTTGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCAGTTGCTGCAGTGTCAGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGCTTCATCAACGCATGGGCAGGGTTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTGACAAATGTCCTGCAGCTGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACAGTTGGTTGGGCAATATAT MVAATAFFFLETNNVSGKWKTPLALGGLVCLVAAVHYFYMREVWVTTGDTPTVYRYVDWLITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGCTTTCTTCTTTCTAGAAACTAACAACGTATCAGGT---AAGTGGAAGACACCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGATACACCTACTGTTTATAGATATGTTGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCA---------GTT---GCTGCAGTGTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGG---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTGAC------AAA---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCAATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLETNNVSG-KWKTPLALGGLVCLVAAVHYFYMREVWV----------TT-------GDTPTVYRYVDW--------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_EF088627 [IV-Proteo4-b] PF13002_env_samples_EF088627 gi|126843504|gb|EF088627| Uncultured bacterium clone PF13002 putative proteorhodopsin gene, partial cds Uncultured bacterium clone PF13002 putative proteorhodopsin gene, partial cds EF088627 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na surface_water_sample Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTGGCCGCTACTGTGTTCTTCTTTCTAGAAACTAACAACGTATCAGGTAAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTAACAACAGGTGATACACCTACTGTTTATAGATATGTTGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCAGTTGCTGCAGTATCAGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGCTTCATCAACGCATGGGCAGGGTTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGTGCTGGCAAATGTCGGGCAGCTGTTCAAACCACTTTCAACACAATTGAGCTTATACGTTACAGTCGGATGGGCAATTTATCCA MVAATVFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGDTPTVYRYVDWLITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAVLANVGQLFKPLSTQLSLYVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTGTTCTTCTTTCTAGAAACTAACAACGTATCAGGT---AAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGATACACCTACTGTTTATAGATATGTTGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCA---------GTT---GCTGCAGTATCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGG---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGTGCTGGCA------AAT---GTCGGGCAGCTGTTC---AAA---CCA---CTT---TCA---ACA---CAATTG---AGCTTATACGTTACAGTC---------------------------------------------------------------GGATGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GDTPTVYRYVDW--------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAVLA--N-VGQLF-K-P-L-S-T-QL-SLYVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_EF088637 [IV-Proteo4-b] PF13013_env_samples_EF088637 gi|126843524|gb|EF088637| Uncultured bacterium clone PF13013 putative proteorhodopsin gene, partial cds Uncultured bacterium clone PF13013 putative proteorhodopsin gene, partial cds EF088637 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na surface_water_sample Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTGGCCGCTACTGTATTCTTCTTTCTAGAAACTAACAATGTATCAGGTAAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTAACAACAGGTGATACACCTACTGTTTATAGATATGTTGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCAGTTGCTGCAGTGTCAGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGCTTCATCAACGCATGGGCAGGGTTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTGACAAATGTCCTGCAGCTGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACAGTTGGCTGGGCCATTTACCCA MVAATVFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGDTPTVYRYVDWLITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTATTCTTCTTTCTAGAAACTAACAATGTATCAGGT---AAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGATACACCTACTGTTTATAGATATGTTGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCA---------GTT---GCTGCAGTGTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGG---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTGAC------AAA---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACAGTT---------------------------------------------------------------GGCTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GDTPTVYRYVDW--------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_EF088619 [IV-Proteo4-b] PF13020_env_samples_EF088619 gi|126843488|gb|EF088619| Uncultured bacterium clone PF13020 putative proteorhodopsin gene, partial cds Uncultured bacterium clone PF13020 putative proteorhodopsin gene, partial cds EF088619 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na surface_water_sample Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTCGCCGCTACTGTATTCTTCTTTCTAGAAACTAACAACGTATCAGGTAAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTAACAACAGGTGATACACCTACTGTTTATAGATATGTTGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCAGTTGCTGCAGTGTCAGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGCTTCATCAACGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTGACAAATGTCCTGCAGCTGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACAGTTGGGTGGGCCATCTATCCA MVAATVFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGDTPTVYRYVDWLITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCCGCTACTGTATTCTTCTTTCTAGAAACTAACAACGTATCAGGT---AAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGATACACCTACTGTTTATAGATATGTTGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCA---------GTT---GCTGCAGTGTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTGAC------AAA---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACAGTT---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GDTPTVYRYVDW--------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_DQ927028 [IV-Proteo4-b] clone_AT06022_DQ927028 gi|116294171|gb|DQ927028| Uncultured bacterium clone AT06022 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT06022 putative proteorhodopsin gene, partial cds. DQ927028 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGCTTGCCGCTATGGCTTTCTTCTTCCTAGAAACTAACAACGTATCAGGTAAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTAACAACAGGTGATACACCTACTGTTTATAGATATGTTGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCATGCTGCAGTTGCTGCAGTGTCAGCTGGTATTTTCTGGAGACTGTTAGTCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGCTTCATCAACGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTGACAAATGTCCTGCAGCTGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACAGTTGGTTGGGCAATCTACCCA MLAAMAFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGDTPTVYRYVDWLITVPLQMIEFYIIHAAVAAVSAGIFWRLLVGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTATGGCTTTCTTCTTCCTAGAAACTAACAACGTATCAGGT---AAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGATACACCTACTGTTTATAGATATGTTGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCATGCTGCA---------GTT---GCTGCAGTGTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAGTCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTGAC------AAA---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAAMAFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GDTPTVYRYVDW--------LITVPLQMIEFYIIHAA---V-AAVSA-GI------------FWR-LLVGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_DQ927038 [IV-Proteo4-b] clone_AT06035_DQ927038 gi|116294191|gb|DQ927038| Uncultured bacterium clone AT06035 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT06035 putative proteorhodopsin gene, partial cds. DQ927038 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGCTTGCCGCTACCGCCTTCTTCTTCCTAGAAACTAACAACGTATCAGGTAAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTAACAACAGGTGATACACCTACTGTTTATAGGTATGTTGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCAGTTGCTGCAGTGTCAGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGTTTCATCAACGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTGACAAATGTCCTGCAGCTGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACAGTTGGTTGGGCAATCTACCCA MLAATAFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGDTPTVYRYVDWLITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACCGCCTTCTTCTTCCTAGAAACTAACAACGTATCAGGT---AAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGATACACCTACTGTTTATAGGTATGTTGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCA---------GTT---GCTGCAGTGTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGT------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTGAC------AAA---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GDTPTVYRYVDW--------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_DQ927007 [IV-Proteo4-b] clone_PF91135_DQ927007 gi|116294129|gb|DQ927007| Uncultured bacterium clone PF91135 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF91135 putative proteorhodopsin gene, partial cds. DQ927007 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGGTTGCCGCTACTGCCTTCTTCTTTCTAGAAACTAACAACGTATCAGGTAAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTAACAACAGGTGATACACCTACTGTTTATAGATATGTTGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCAGTTGCTGCAGTGTCAGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGCTTCATCAACGCATGGGCAGGTTTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCGGACAAATGTCCTGCTGCTGTTCAAACAGCTTTCAGCACAATGAGATGGATCGTTACAGTTGGTTGGGCAATTTACCCA MVAATAFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGDTPTVYRYVDWLITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFSTMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGCCTTCTTCTTTCTAGAAACTAACAACGTATCAGGT---AAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGATACACCTACTGTTTATAGATATGTTGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCA---------GTT---GCTGCAGTGTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGT---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCGGAC------AAA---TGTCCTGCTGCTGTT---CAA---ACA---GCT---TTC---AGC---ACAATG---AGATGGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GDTPTVYRYVDW--------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-S-TM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_EU915870 [IV-Proteo4-b] APF1149_env_samples_EU915870 gi|229358622|gb|EU915870| Uncultured microorganism clone APF1149 putative proteorhodopsin gene, partial cds Uncultured microorganism clone APF1149 putative proteorhodopsin gene, partial cds EU915870 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample_at_200_m_depth Atlantic Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTAGCCGCTACTGCTTTCTTCTTTCTAGAAACTAACAACGTATCAGGTAAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTACATGAGAGAAGTATGGGTAACAACAGGTGATACACCTACTGTTTACAGATATGTTGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCAGTTGCTGCAGTGTCAGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGTTTCATCAACGCATGGGCAGGTTTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTGACAAATGTCCTGCAGCTGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACAGTTGGTTGGGCCATTTAC MLAATAFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGDTPTVYRYVDWLITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTAGCCGCTACTGCTTTCTTCTTTCTAGAAACTAACAACGTATCAGGT---AAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTACATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGATACACCTACTGTTTACAGATATGTTGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCA---------GTT---GCTGCAGTGTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGT------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGT---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTGAC------AAA---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCCATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GDTPTVYRYVDW--------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_EF088556 [IV-Proteo4-b] clone_APF1149_EF088556 gi|126843336|gb|EF088556| Uncultured bacterium clone APF1149 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone APF1149 putative proteorhodopsin gene, partial cds. EF088556 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na 200m water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGCTAGCCGCTACTGCTTTCTTCTTTCTAGAAACTAACAACGTATCAGGTAAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTACATGAGAGAAGTATGGGTAACAACAGGTGATACACCTACTGTTTACAGATATGTTGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCAGTTGCTGCAGTGTCAGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGTTTCATCAACGCATGGGCAGGTTTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTGACAAATGTCCTGCAGCTGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACAGTTGGTTGGGCCATTTACCCA MLAATAFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGDTPTVYRYVDWLITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTAGCCGCTACTGCTTTCTTCTTTCTAGAAACTAACAACGTATCAGGT---AAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTACATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGATACACCTACTGTTTACAGATATGTTGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCA---------GTT---GCTGCAGTGTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGT------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGT---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTGAC------AAA---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GDTPTVYRYVDW--------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_EF088629 [IV-Proteo4-b] PF13004_env_samples_EF088629 gi|126843508|gb|EF088629| Uncultured bacterium clone PF13004 putative proteorhodopsin gene, partial cds Uncultured bacterium clone PF13004 putative proteorhodopsin gene, partial cds EF088629 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na surface_water_sample Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGCTAGCCGCTACTGCGTTCTTCTTTTTAGAAACTAACAACGTATCAGGTAAGTGGAAGACATCTCTTGCAATTGGCGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTAACAACAGGTGATACACCTACTGTTTATAGATATGTTGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCAGTTGCTGCAGTGTCAGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGCTTCATCAACGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTGACAAATGTCCTGCAGCTGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACAGTTGGGTGGGCCATTTACCCA MLAATAFFFLETNNVSGKWKTSLAIGGLVCLVAAVHYFYMREVWVTTGDTPTVYRYVDWLITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTAGCCGCTACTGCGTTCTTCTTTTTAGAAACTAACAACGTATCAGGT---AAGTGGAAGACATCTCTTGCAATTGGCGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGATACACCTACTGTTTATAGATATGTTGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCA---------GTT---GCTGCAGTGTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTGAC------AAA---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACAGTT---------------------------------------------------------------GGGTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFLETNNVSG-KWKTSLAIGGLVCLVAAVHYFYMREVWV----------TT-------GDTPTVYRYVDW--------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_EF088617 [IV-Proteo4-b] PF13017_env_samples_EF088617 gi|126843484|gb|EF088617| Uncultured bacterium clone PF13017 putative proteorhodopsin gene, partial cds Uncultured bacterium clone PF13017 putative proteorhodopsin gene, partial cds EF088617 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na surface_water_sample Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGCTAGCCGCTACTGCGTTCTTCTTTCTAGAAACTAACAACGTATCAGGTAAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTAACAACAGGTGATACACCTACTGTTTATAGATATGTTGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCAGTTGCTGCAGTGTCAGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGCTTCATCAACGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTGACAAATGTCCTGCAGCTGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACAGTTGGTTGGGCTATCTACCCA MLAATAFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGDTPTVYRYVDWLITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTAGCCGCTACTGCGTTCTTCTTTCTAGAAACTAACAACGTATCAGGT---AAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGATACACCTACTGTTTATAGATATGTTGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCA---------GTT---GCTGCAGTGTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTGAC------AAA---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GDTPTVYRYVDW--------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_EF088638 [IV-Proteo4-b] PF13014_env_samples_EF088638 gi|126843526|gb|EF088638| Uncultured bacterium clone PF13014 putative proteorhodopsin gene, partial cds Uncultured bacterium clone PF13014 putative proteorhodopsin gene, partial cds EF088638 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na surface_water_sample Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGCTCGCCGCTACTGCGTTCTTCTTCCTAGAAACTAACAACGTATCAGGTAAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCTGCAGTACACTACTTCTATATGAGAGAAGTATGGGTAACAACAGGTGATACACTTACTGTTTATAGATATGTTGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCAGTTGCTGCAGTTTCAGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGCTTCATCAACGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCAGCTGACAAATGTCCTGCAGCTGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACAGTTGGTTGGGCTATTTATCCA MLAATAFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGDTLTVYRYVDWLITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTCGCCGCTACTGCGTTCTTCTTCCTAGAAACTAACAACGTATCAGGT---AAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCTGCAGTACACTACTTCTATATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGATACACTTACTGTTTATAGATATGTTGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCA---------GTT---GCTGCAGTTTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCAGCTGAC------AAA---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GDTLTVYRYVDW--------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_EF100792 [IV-Proteo4-b] clone_ID29012_EF100792 gi|126513363|gb|EF100792| Uncultured bacterium clone ID29012 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID29012 putative proteorhodopsin gene, partial cds. EF100792 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-nov-07 #na surface water Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGCTCGCCGCTACTGTATTCTTCTTCCTAGAAACTAACAACGTATCAGGTAAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTAGCAACAGGTGATACACCTACTGTTTATAGATATGTTGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCAGTTGCTGCAGTTTCAGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGCTTCATCAACGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTGACAAATGTCCTGCAGCTGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACAGTTGGTTGGGCAATATATCCA MLAATVFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVATGDTPTVYRYVDWLITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTCGCCGCTACTGTATTCTTCTTCCTAGAAACTAACAACGTATCAGGT---AAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTA------------------------------GCAACA---------------------GGTGATACACCTACTGTTTATAGATATGTTGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCA---------GTT---GCTGCAGTTTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTGAC------AAA---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------AT-------GDTPTVYRYVDW--------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_DQ887788 [IV-Proteo4-b] clone_PF10013_DQ887788 gi|116294276|gb|DQ887788| Uncultured bacterium clone PF10013 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF10013 putative proteorhodopsin gene, partial cds. DQ887788 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2007 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGCTCGCCGCTACTGCATTCTTCTTCCTAGAAACTAACAACGTATCAGGTAAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTAACAACAGGTGATACACCTACTGTTTATAGATATGTTGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCAGTTGCTGCAGTGTCAGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGCTTCATCAACGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGGAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTGACAAATGTCCTGCAGCTGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACAGTTGGGTGGGCCATCTATCCA MLAATAFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGDTPTVYRYVDWLITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYGIFAGEAGKAAADKCPAAVQTAFNTMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTCGCCGCTACTGCATTCTTCTTCCTAGAAACTAACAACGTATCAGGT---AAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGATACACCTACTGTTTATAGATATGTTGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCA---------GTT---GCTGCAGTGTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGGAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTGAC------AAA---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACAGTT---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GDTPTVYRYVDW--------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYGI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_DQ903138 [IV-Proteo4-b] clone_A1S0106_DQ903138 gi|116294005|gb|DQ903138| Uncultured bacterium clone A1S0106 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A1S0106 putative proteorhodopsin gene, partial cds. DQ903138 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na South China Sea surface water (SCS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na ATGGTAGCCGCTACTGTGTTCTTCTTTCTAGAAACTAACAACGTATCAGGTAAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTAACAACAGGTGATACACCTACTGTTTATAGATATGTTGACTGGTTAATCACTGTTCCATTACAGATGATTGAGTTCTACATTATCCTTGCTGCAGTTGCTGCAGTGTCAGCTGGTATTTTCTGGAGACTGTTAATAGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGCTTCATCAACGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTGACAAATGTCCTGCAGCTGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACAGTTGGTTGGGCTATCTATCCA MVAATVFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGDTPTVYRYVDWLITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTGTTCTTCTTTCTAGAAACTAACAACGTATCAGGT---AAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGATACACCTACTGTTTATAGATATGTTGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAGTTCTACATTATCCTTGCTGCA---------GTT---GCTGCAGTGTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATAGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTGAC------AAA---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GDTPTVYRYVDW--------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_EF088632 [IV-Proteo4-b] PF13008_env_samples_EF088632 gi|126843514|gb|EF088632| Uncultured bacterium clone PF13008 putative proteorhodopsin gene, partial cds Uncultured bacterium clone PF13008 putative proteorhodopsin gene, partial cds EF088632 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na surface_water_sample Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGCTAGCCGCTACTGCATTCTTCTTTCTAGAAACTAACAACGTATCAGGTAAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTAACAACAGGTGATACACCTACTGTTTATAGATATGTTGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCAGTTGCTGCAGTATCAGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGCTTCATCAACGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGAAAAGCTGCTGCTGACAAATGTCCTGCAGCTGTTCGAACAGCTTTCAACACAATGAGATGGATCGTTACAGTTGGATGGGCTATCTATCCA MLAATAFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGDTPTVYRYVDWLITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVRTAFNTMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTAGCCGCTACTGCATTCTTCTTTCTAGAAACTAACAACGTATCAGGT---AAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGATACACCTACTGTTTATAGATATGTTGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCA---------GTT---GCTGCAGTATCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGAAAAGCTGCTGCTGAC------AAA---TGTCCTGCAGCTGTT---CGA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACAGTT---------------------------------------------------------------GGATGG---------GCTATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GDTPTVYRYVDW--------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-R-T-A-F-N-TM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_EU915847 [IV-Proteo4-b] APF1102_env_samples_EU915847 gi|229358576|gb|EU915847| Uncultured microorganism clone APF1102 putative proteorhodopsin gene, partial cds Uncultured microorganism clone APF1102 putative proteorhodopsin gene, partial cds EU915847 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample_at_200_m_depth Atlantic Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTAGCCGCTACTGTATTCTTCTTTCTAGAAACTAACAACGTATCAGGTAAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTAACAACAGGTGATACACCTACTGTTTATAGATATGTTGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCAGTTGCTGCAGTGTCAGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGCTTCATCAACGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTGACAAATGTCCTGCAGCTGTTCAAACAGCTTTCAGCACAATGAGATGGATCGTTACAGTTGGATGGGCCATTTAC MLAATVFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGDTPTVYRYVDWLITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFSTMRWIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTAGCCGCTACTGTATTCTTCTTTCTAGAAACTAACAACGTATCAGGT---AAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGATACACCTACTGTTTATAGATATGTTGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCA---------GTT---GCTGCAGTGTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTGAC------AAA---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTC---AGC---ACAATG---AGATGGATCGTTACAGTT---------------------------------------------------------------GGATGG---------GCCATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GDTPTVYRYVDW--------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-S-TM-RWIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_EF088533 [IV-Proteo4-b] clone_APF1102_EF088533 gi|126843290|gb|EF088533| Uncultured bacterium clone APF1102 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone APF1102 putative proteorhodopsin gene, partial cds. EF088533 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na 200m water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGCTAGCCGCTACTGTATTCTTCTTTCTAGAAACTAACAACGTATCAGGTAAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTAACAACAGGTGATACACCTACTGTTTATAGATATGTTGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCAGTTGCTGCAGTGTCAGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGCTTCATCAACGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTGACAAATGTCCTGCAGCTGTTCAAACAGCTTTCAGCACAATGAGATGGATCGTTACAGTTGGATGGGCCATTTACCCA MLAATVFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGDTPTVYRYVDWLITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFSTMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTAGCCGCTACTGTATTCTTCTTTCTAGAAACTAACAACGTATCAGGT---AAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGATACACCTACTGTTTATAGATATGTTGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCA---------GTT---GCTGCAGTGTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTGAC------AAA---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTC---AGC---ACAATG---AGATGGATCGTTACAGTT---------------------------------------------------------------GGATGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GDTPTVYRYVDW--------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-S-TM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_EF088639 [IV-Proteo4-b] PF13031_env_samples_EF088639 gi|126843528|gb|EF088639| Uncultured bacterium clone PF13031 putative proteorhodopsin gene, partial cds Uncultured bacterium clone PF13031 putative proteorhodopsin gene, partial cds EF088639 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na surface_water_sample Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTGGCCGCTACTGCCTTCTTCTTCCTAGAAACTAACAATGTATCAGGTAAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTAACAACAGGTGATACACCTACTGTTTATAGATATGTTGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCAGTTGCTGCAGTGTCAGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGCTTCATCAACGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTGACAAATGTCCTGCAGCTGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACAGTTGGATGGGCTATTTAT MVAATAFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGDTPTVYRYVDWLITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCCTTCTTCTTCCTAGAAACTAACAATGTATCAGGT---AAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGATACACCTACTGTTTATAGATATGTTGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCA---------GTT---GCTGCAGTGTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTGAC------AAA---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACAGTT---------------------------------------------------------------GGATGG---------GCTATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GDTPTVYRYVDW--------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_EF088618 [IV-Proteo4-b] PF13019_env_samples_EF088618 gi|126843486|gb|EF088618| Uncultured bacterium clone PF13019 putative proteorhodopsin gene, partial cds Uncultured bacterium clone PF13019 putative proteorhodopsin gene, partial cds EF088618 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na surface_water_sample Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTGGCCGCTACTGCTTTCTTCTTTCTAGAAACTAACAACGTATCAGGTAAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTAACAACAGGTGATACACCTACTGTTTATAGATATGTTGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCAGTTGCTGCAGTGTCAGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTAATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGCTTCATCAATGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTGACAAATGTCCTGCAGCTGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACAGTTGGGTGGGCCATTTATCCA MVAATAFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGDTPTVYRYVDWLITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCTTTCTTCTTTCTAGAAACTAACAACGTATCAGGT---AAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGATACACCTACTGTTTATAGATATGTTGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCA---------GTT---GCTGCAGTGTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTAATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTGAC------AAA---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACAGTT---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GDTPTVYRYVDW--------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_DQ927021 [IV-Proteo4-b] clone_AT06015_DQ927021 gi|116294157|gb|DQ927021| Uncultured bacterium clone AT06015 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT06015 putative proteorhodopsin gene, partial cds. DQ927021 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGCTGGCCGCTACTGTTTTCTTCTTTCTAGAAACTAACAACGTATCAGGTAAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTAACAACAGGTGATACACCTACTGTTTATAGATATGTTGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCAGTTGCTGCAGTGTCAGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGCTTCATCAACGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTGACAAATGTCCTGCAGCTGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACAGTTGGGTGGGCCATTTACCCA MLAATVFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGDTPTVYRYVDWLITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGTTTTCTTCTTTCTAGAAACTAACAACGTATCAGGT---AAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGATACACCTACTGTTTATAGATATGTTGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCA---------GTT---GCTGCAGTGTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTGAC------AAA---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACAGTT---------------------------------------------------------------GGGTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GDTPTVYRYVDW--------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_EF100798 [IV-Proteo4-b] clone_ID29024_EF100798 gi|126513375|gb|EF100798| Uncultured bacterium clone ID29024 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID29024 putative proteorhodopsin gene, partial cds. EF100798 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-nov-07 #na surface water Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGGTTGCCGCTACTGTTTTCTTCTTCCTAGAAACTAACAACGTATCAGGTAAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTAACAACAGGTGATACACCTACTGTTTATAGATATGTTGACTGGTTAATCATTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCAGTTGCTGCAGTTTCAGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGCTTCATCAACGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTGACAAATGTCCTGCAGCCGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACAGTTGGATGGGCAATTTACCCA MVAATVFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGDTPTVYRYVDWLIIVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTTTTCTTCTTCCTAGAAACTAACAACGTATCAGGT---AAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCCGCAGTACACTACTTCTATATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGATACACCTACTGTTTATAGATATGTTGACTGG------------------------TTAATCATTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCA---------GTT---GCTGCAGTTTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTGAC------AAA---TGTCCTGCAGCCGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACAGTT---------------------------------------------------------------GGATGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GDTPTVYRYVDW--------LIIVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_EU915813 [IV-Proteo4-b] PF92018_env_samples_EU915813 gi|229358508|gb|EU915813| Uncultured microorganism clone PF92018 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF92018 putative proteorhodopsin gene, partial cds EU915813 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGCATTCTTCTTTCTAGAAACTAACAACGTATCAGGTAAGTGGAAGACTTCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCTGCAGTTCACTACTTCTACATGAGAGAAGTATGGGTAACAACAGGTGATACACCTACTGTTTATAGATATGTTGACTGGTTAATCACTGTTCCTTTACAGATGATTGAATTCTACATTATCCTTGCTGCTGTTGCTGCAGTATCAGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCAGGCTTCATTAATGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCCGCTGCAGACAAATGTCCTGCTGCTGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACAGTTGGTTGGGCAATTTAT MVAATAFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGDTPTVYRYVDWLITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCATTCTTCTTTCTAGAAACTAACAACGTATCAGGT---AAGTGGAAGACTTCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCTGCAGTTCACTACTTCTACATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGATACACCTACTGTTTATAGATATGTTGACTGG------------------------TTAATCACTGTTCCTTTACAGATGATTGAATTCTACATTATCCTTGCTGCT---------GTT---GCTGCAGTATCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCA------------------GGC------TTC---------------------------------ATT------------------------------------------------------------------AATGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCCGCTGCAGAC------AAA---TGTCCTGCTGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GDTPTVYRYVDW--------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_EU915814 [IV-Proteo4-b] PF92019_env_samples_EU915814 gi|229358510|gb|EU915814| Uncultured organism clone PF92019 putative proteorhodopsin gene, partial cds Uncultured organism clone PF92019 putative proteorhodopsin gene, partial cds EU915814 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTGGCCGCTACTGTTTTCTTCTTTCTAGAAACTAACAACGTATCAGGTAAGTGGAAGACTTCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCTGCAGTACACTACTTCTATATGAGAGAAGTATGGGTAACGACAGGTGATACACCTACTGTTTATAGATATGTTGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTCTACATCATCCTTGCTGCAGTTGCTGCAGTATCAGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGCTTCATTAATGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTGACAAATGTCCTGCAGCTGTTCAAACAGCCTTCAACACAATGAGATGGATCGTTACAGTTGGTTGGGCAATATAT MLAATVFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGDTPTVYRYVDWLITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGTTTTCTTCTTTCTAGAAACTAACAACGTATCAGGT---AAGTGGAAGACTTCTCTTGCACTTGGTGGTCTTGTTTGTCTAGTTGCTGCAGTACACTACTTCTATATGAGAGAAGTATGGGTA------------------------------ACGACA---------------------GGTGATACACCTACTGTTTATAGATATGTTGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTCTACATCATCCTTGCTGCA---------GTT---GCTGCAGTATCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGC------TTC---------------------------------ATT------------------------------------------------------------------AATGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTGAC------AAA---TGTCCTGCAGCTGTT---CAA---ACA---GCC---TTC---AAC---ACAATG---AGATGGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCAATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GDTPTVYRYVDW--------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_EF088583 [IV-Proteo4-b] clone_AT37057_EF088583 gi|126843405|gb|EF088583| Uncultured bacterium clone AT37057 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT37057 putative proteorhodopsin gene, partial cds. EF088583 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na surface water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTGGTCGCTACTGTATTCTTCTTTTTAGAGACTAACAACGTATCAGGTAAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTTTAGTTGCTGCAGTTCACTACTTCTACATGAGAGAAGTGTGGGTAACAACAGGTGCTACACCTACTGTTTATAGATATGTTGACTGGTTAATCACTGTTCCTTTACAGATGATTGAATTTTACATAATCCTTGCTGCTGTTGCTACAGTTTCAGCTGGTATTTTCTGGAGACTATTAATTGGTACTTTAGTGATGCTTGTAGCTGGTTATGCTGGTGAAGCAGGCTTCATCAACGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAGGCTGCTGCTGACAAGTGTCCTGCAGCTGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACTGTTGGGTGGGCTATTTACCCA MVVATVFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGATPTVYRYVDWLITVPLQMIEFYIILAAVATVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGTCGCTACTGTATTCTTCTTTTTAGAGACTAACAACGTATCAGGT---AAGTGGAAGACATCTCTTGCACTTGGTGGTCTTGTTTGTTTAGTTGCTGCAGTTCACTACTTCTACATGAGAGAAGTGTGGGTA------------------------------ACAACA---------------------GGTGCTACACCTACTGTTTATAGATATGTTGACTGG------------------------TTAATCACTGTTCCTTTACAGATGATTGAATTTTACATAATCCTTGCTGCT---------GTT---GCTACAGTTTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTATTAATTGGTACTTTAGTGATGCTTGTAGCTGGTTATGCTGGTGAA---------GCA------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAGGCTGCTGCTGAC------AAG---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACTGTT---------------------------------------------------------------GGGTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVVATVFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GATPTVYRYVDW--------LITVPLQMIEFYIILAA---V-ATVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_EU079202 [IV-Proteo4-b] NASB_63_env_samples_EU079202 gi|156106564|gb|EU079202| Uncultured organism clone NASB 63 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 63 putative proteorhodopsin gene, partial cds EU079202 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGTTATATTGACTGGTTAATCACTGTTCCTTTACAGATGATTGAATTTTACATAATCCTTGCTGCTGTTGCTACAGTTTCAGCTGGTATTTTCTGGAGACTATTAATTGGTACTTTAGTAATGCTTGTAGCTGGTTATGCTGGTGAAGCAGGTTTCATCAACGCATGGGCAGGATTCATTGTAGGTCTTGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTGATAAATGTCCTGCAGCTGTTCAAACAGCTTTCAACACAATGAGATGGATTGTTACAGTTGGATGGGCAATATAC RYIDWLITVPLQMIEFYIILAAVATVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTATATTGACTGG------------------------TTAATCACTGTTCCTTTACAGATGATTGAATTTTACATAATCCTTGCTGCT---------GTT---GCTACAGTTTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTATTAATTGGTACTTTAGTAATGCTTGTAGCTGGTTATGCTGGTGAA---------GCA------------------GGT------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGA---TTCATTGTAGGTCTTGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTGAT------AAA---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATTGTTACAGTT---------------------------------------------------------------GGATGG---------GCAATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYIILAA---V-ATVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_KJ926111 [IV-Proteo4-b] BOUM_OTU024_env_samples gb|KJ926111| Uncultured bacterium clone BOUM OTU024 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU024 putative proteorhodopsin gene, partial cds KJ926111 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 33.709667 32.644667 #na #na #na #na #na GTAGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTTTACATTATCCTTGCTGCTGTTGCTACAGTATCAGCTGGTATCTTCTGGAGACTTTTAATTGGTACTCTAGTAATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGCTTTATCAATGCATGGGCAGGATTTATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCAGACAAATGTCCTGCTGCTGTTCAAACAGCTTTCAACACAATGAGATGGATTGTTACAGTCGGATGGGCAATATAC VDWLITVPLQMIEFYIILAAVATVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTTTACATTATCCTTGCTGCT---------GTT---GCTACAGTATCAGCT---GGTATC------------------------------------TTCTGGAGA---CTTTTAATTGGTACTCTAGTAATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGC------TTT---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGCAGGA---TTTATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCAGAC------AAA---TGTCCTGCTGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATTGTTACAGTC---------------------------------------------------------------GGATGG---------GCAATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPLQMIEFYIILAA---V-ATVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_EF088560 [IV-Proteo4-b] clone_AT37004_EF088560 gi|126843359|gb|EF088560| Uncultured bacterium clone AT37004 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT37004 putative proteorhodopsin gene, partial cds. EF088560 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na surface water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTAGCCGCTACTGCGTTCTTCTTAGAGACTAACAACGTATCTGGTAAGTGGAAGACATCTCTTGCACTTGGTGGACTAGTTTGTTTAGTTGCCGCAGTTCACTACTTCTATATGAGAGAAGTATGGGTAACAACAGGTGAAACACCTACTGTTTATAGATATGTTGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTTTACATTATCCTTGCTGCTGTTGCTACAGTATCAGCTGGTATCTTCTGGAGACTTTTAATTGGTACTCTAGTAATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGCTTTATCAATGCATGGGCAGGATTTATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCAGACAAATGTCCTGCTGCTGTTCAAACAGCTTTCAACACAATGAGATGGATTGTTACAGTCGGATGGGCTATATATCCA MVAATAFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGETPTVYRYVDWLITVPLQMIEFYIILAAVATVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGCG---TTCTTCTTAGAGACTAACAACGTATCTGGT---AAGTGGAAGACATCTCTTGCACTTGGTGGACTAGTTTGTTTAGTTGCCGCAGTTCACTACTTCTATATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGAAACACCTACTGTTTATAGATATGTTGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTTTACATTATCCTTGCTGCT---------GTT---GCTACAGTATCAGCT---GGTATC------------------------------------TTCTGGAGA---CTTTTAATTGGTACTCTAGTAATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGC------TTT---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGCAGGA---TTTATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCAGAC------AAA---TGTCCTGCTGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATTGTTACAGTC---------------------------------------------------------------GGATGG---------GCTATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATA-FFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GETPTVYRYVDW--------LITVPLQMIEFYIILAA---V-ATVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_EU915884 [IV-Proteo4-b] US80214_env_samples_EU915884 gi|229358650|gb|EU915884| Uncultured microorganism clone US80214 putative proteorhodopsin gene, partial cds Uncultured microorganism clone US80214 putative proteorhodopsin gene, partial cds EU915884 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_surface_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTCGCCGCTACTGCTTTCTTCTTTTTAGAGACTAACAACGTATCTGGTAAGTGGAAGACATCTCTTGCACTTGGTGGATTGGTTTGTTTAGTTGCTGCAGTTCACTACTTCTATATGAGAGAAGTATGGGTAACAACAGGTGAAACACCTACTGTTTATAGATATGTTGACTGGTTAATCACTGTTCCTTTACAGATGATTGAATTCTACATTATCCTTGCTGCTGTTGCTACAGTATCTGCTGGTATTTTCTGGAGACTATTAATTGGTACTTTAGTAATGCTAGTTGCTGGTTATGCTGGTGAAGCTGGCTTTATCAATGCATGGGCAGGATTTATTGTAGGTCTAGCTGGTTGGGCATACATCTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCGGACAAATGTCCTCCAGCTGTTCAAACAGCCTTCAACACAATGAGATGGATTGTTACAGTCGGATGGGCGATTTAC MVAATAFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGETPTVYRYVDWLITVPLQMIEFYIILAAVATVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPPAVQTAFNTMRWIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCCGCTACTGCTTTCTTCTTTTTAGAGACTAACAACGTATCTGGT---AAGTGGAAGACATCTCTTGCACTTGGTGGATTGGTTTGTTTAGTTGCTGCAGTTCACTACTTCTATATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGAAACACCTACTGTTTATAGATATGTTGACTGG------------------------TTAATCACTGTTCCTTTACAGATGATTGAATTCTACATTATCCTTGCTGCT---------GTT---GCTACAGTATCTGCT---GGTATT------------------------------------TTCTGGAGA---CTATTAATTGGTACTTTAGTAATGCTAGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGC------TTT---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGCAGGA---TTTATTGTAGGTCTAGCTGGTTGGGCATACATCTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCGGAC------AAA---TGTCCTCCAGCTGTT---CAA---ACA---GCC---TTC---AAC---ACAATG---AGATGGATTGTTACAGTC---------------------------------------------------------------GGATGG---------GCGATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GETPTVYRYVDW--------LITVPLQMIEFYIILAA---V-ATVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPPAV-Q-T-A-F-N-TM-RWIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_EU915890 [IV-Proteo4-b] US80224_env_samples_EU915890 gi|229358662|gb|EU915890| Uncultured microorganism clone US80224 putative proteorhodopsin gene, partial cds Uncultured microorganism clone US80224 putative proteorhodopsin gene, partial cds EU915890 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_surface_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTCGTCGCTACTGTGTTCTTCTTTTTAGAGACTAACAACGTATCTGGTAAGTGGAAGACATCTCTTGCACTTGGTGGATTGGTTTGTTTAGTTGCTGCAGTTCATTACTTCTATATGAGAGAAGTATGGGTAACAACAGGTGAAACACCTACTGTTTATAGATATGTTGACTGGTTAATCACTGTTCCTTTACAGATGATTGAATTTTACATTATCCTTGCTGCTGTTACTACAGTATCTGCTGGTATTTTCTGGAGACTATTAATTGGTACTTTAGTAATGCTAGTTGCTGGTTATGCTGGTGAAGCTGGCTTTATCAATGCATGGGCAGGATTTATTGTAGGTCTAGCTGGTTGGGCATATATCTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCGGACAAATGTCCTCCAGCTGTTCAAACAGCCTTCAACACAATGAGATGGATTGTTACAGTCGGATGGGCCATATAC MLVATVFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGETPTVYRYVDWLITVPLQMIEFYIILAAVTTVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPPAVQTAFNTMRWIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTCGTCGCTACTGTGTTCTTCTTTTTAGAGACTAACAACGTATCTGGT---AAGTGGAAGACATCTCTTGCACTTGGTGGATTGGTTTGTTTAGTTGCTGCAGTTCATTACTTCTATATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGAAACACCTACTGTTTATAGATATGTTGACTGG------------------------TTAATCACTGTTCCTTTACAGATGATTGAATTTTACATTATCCTTGCTGCT---------GTT---ACTACAGTATCTGCT---GGTATT------------------------------------TTCTGGAGA---CTATTAATTGGTACTTTAGTAATGCTAGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGC------TTT---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGCAGGA---TTTATTGTAGGTCTAGCTGGTTGGGCATATATCTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCGGAC------AAA---TGTCCTCCAGCTGTT---CAA---ACA---GCC---TTC---AAC---ACAATG---AGATGGATTGTTACAGTC---------------------------------------------------------------GGATGG---------GCCATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLVATVFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GETPTVYRYVDW--------LITVPLQMIEFYIILAA---V-TTVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPPAV-Q-T-A-F-N-TM-RWIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_1112731828227 [IV-Proteo4-b] JCVI_ORF_1112731828227_GS117a_Coastal_sample_2m jcvi|1112731828227| 1112731828227 JCVI ORF 1112731828227 1112731828227 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 09-sept-05 Coastal_sample/2m_depth/S_35.5_psu/GS117a/St._Anne_Island/Seychelles/Indian_Ocean Indian Ocean marine -4.613611 55.50861 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGATTAAGTTTTTAAAAAAAGTGGCTGTCCCTACAGCTGCATTATTAGCGCTTCCAGGCATAGCTTCTGCAAGCGTTGGCTTACAGCCAAACGACTTTGTTGGGATATCTTTTTGGGTAATCTCAATGTGTATGGTCGCTGCAACCGCATTTTTCTTTTTAGAGACTAACAACGTATCAGGTAAGTGGAAGACTTCTCTTGCACTTGGTGGATTAGTTTGTCTAGTTGCTGCGGTCCACTACTTCTACATGAGAGAAGTATGGGTAACAACAGGTGAGACACCTACGGTTTACAGATATGTAGACTGGTTAATTACTGTTCCATTACAGATGATTGAATTTTACATAATTCTTGCTGCCGTTGCTACGGTATCAGCAGGTATTTTCTGGAGACTATTAATTGGTACTTTAGTAATGCTTGTTGCTGGATACATGGGTGAAGCTGGCTTCATCAATGCATGGGCAGGATTTATTGTTGGTTTAGCTGGTTGGGCTTACATCTTATATGAAATCTTTGCTGGTGAAGCTGGAAAAGCTGCTGCAGATAAGTGTCCTGCTGCCGTTCAAACAGCCTTCAATACAATGAGATGGATTGTAACTATTGGTTGGGCCATTTATCCTTTAGGATATTTCTTTGGATATCTAACTGGTGGTGCCGATGCAGTCACATTAAACGTTATCTATAACGTAGCTGACGTTGTGAATAAGATCGCTTTTGTCGCAGTTATTTGGGCTGCTGCTACAGCATCTTCAAGCAAAAAAGCT MIKFLKKVAVPTAALLALPGIASASVGLQPNDFVGISFWVISMCMVAATAFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGETPTVYRYVDWLITVPLQMIEFYIILAAVATVSAGIFWRLLIGTLVMLVAGYMGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTIGWAIYPLGYFFGYLTGGADAVTLNVIYNVADVVNKIAFVAVIWAAATASSSKKA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGATTAAGTTTTTAAAAAAAGTGGCTGTCCCTACAGCTGCATTATTAGCGCTTCCAGGCATAGCTTCTGCAAGCGTTGGCTTACAGCCAAACGACTTTGTTGGGATATCTTTTTGGGTAATCTCAATGTGTATGGTCGCTGCAACCGCATTTTTCTTTTTAGAGACTAACAACGTATCAGGT---AAGTGGAAGACTTCTCTTGCACTTGGTGGATTAGTTTGTCTAGTTGCTGCGGTCCACTACTTCTACATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGAGACACCTACGGTTTACAGATATGTAGACTGG------------------------TTAATTACTGTTCCATTACAGATGATTGAATTTTACATAATTCTTGCTGCC---------GTT---GCTACGGTATCAGCA---GGTATT------------------------------------TTCTGGAGA---CTATTAATTGGTACTTTAGTAATGCTTGTTGCTGGATACATGGGTGAA---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGCAGGA---TTTATTGTTGGTTTAGCTGGTTGGGCTTACATCTTATATGAAATC---------------TTT------GCT---GGTGAAGCTGGAAAAGCTGCTGCAGAT------AAG---TGTCCTGCTGCCGTT---CAA---ACA---GCC---TTC---AAT---ACAATG---AGATGGATTGTAACTATT---------------------------------------------------------------GGTTGG---------GCCATTTATCCTTTAGGATATTTCTTTGGATATCTA---------------------------------------ACTGGTGGTGCCGATGCAGTCACATTAAACGTTATCTATAACGTAGCTGACGTTGTGAATAAGATCGCTTTTGTCGCAGTTATTTGGGCTGCTGCTACAGCATCT---TCAAGCAAAAAAGCT------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------MIKFLKKVAVPTAALLALPGIASASVGLQPNDFVGISFWVISMCMVAATAFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GETPTVYRYVDW--------LITVPLQMIEFYIILAA---V-ATVSA-GI------------FWR-LLIGTLVMLVAGYMGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTI---------------------GW---AIYPLGYFFGYL-------------TGGADAVTLNVIYNVADVVNKIAFVAVIWAAATAS-SSKKA------------------------------------ [IV-Proteo4-b]_1105154902068 [IV-Proteo4-b] JCVI_ORF_1105154902068_GS047_Open_Ocean_30m jcvi|1105154902068| 1105154902068 JCVI ORF 1105154902068 1105154902068 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 28-mars-04 Open_Ocean/30m_depth/S_37.3_psu/GS047/201_miles_from_F._Polynesia/Tropical_South_Pacific Pacific Ocean marine -10.131389 -135.44945 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGATTAAGTTTTTAAAATCGATGGCTATCCCAACAGCTGCTCTAGTGGCACTGCCAGGTATAGCTTCTGCAAGCGTTGGCTTACAGCCAAACGACTTCGTTGGGATATCTTTTTGGGTTATCTCTATGTGTATGGTTGCCGCAACCGCATTTTTCTTTTTAGAAACTAATAATGTATCAGGTAAATGGAAGACTTCATTAGCACTTGGTGGTTTAGTATGTTTAGTTGCTGCAGTTCACTACTTCTACATGAGAGAAGTATGGGTAACAACAGGTGAAACACCTACTGTTTACAGATATGTAGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTTTATATTATCCTAGCTGCCGTTGCTACAGTATCAGCGGGTATTTTCTGGAGACTATTAATTGGTACTTTAGTAATGCTAGTTGCTGGTTACATGGGTGAAGCTGGTTTCATCAATGCATGGGCTGGATTTATTGTTGGTTTAGCTGGTTGGGCATACATCTTATATGAAATCTTTGCCGGTGAGGCTGGAAAAGCTGCAGCTGACAAATGTCCTGCTGCTGTTCAAACAGCTTTCAACACAATGAGATGGATTGTAACTATTGGTTGGGCTATTTATCCTTTAGGATATTTCTTTGGTTACCTAACTGGTGGTGCCGATGCAGTTACATTAAACGTTATCTATAACGTAGCTGACGTTGTCAATAAGATCGCTTTTGTCGCAGTTATTTGGGCTGCTGCAACTGCTTCTTCTGGCAAAAAAGCT MIKFLKSMAIPTAALVALPGIASASVGLQPNDFVGISFWVISMCMVAATAFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGETPTVYRYVDWLITVPLQMIEFYIILAAVATVSAGIFWRLLIGTLVMLVAGYMGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTIGWAIYPLGYFFGYLTGGADAVTLNVIYNVADVVNKIAFVAVIWAAATASSGKKA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGATTAAGTTTTTAAAATCGATGGCTATCCCAACAGCTGCTCTAGTGGCACTGCCAGGTATAGCTTCTGCAAGCGTTGGCTTACAGCCAAACGACTTCGTTGGGATATCTTTTTGGGTTATCTCTATGTGTATGGTTGCCGCAACCGCATTTTTCTTTTTAGAAACTAATAATGTATCAGGT---AAATGGAAGACTTCATTAGCACTTGGTGGTTTAGTATGTTTAGTTGCTGCAGTTCACTACTTCTACATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGAAACACCTACTGTTTACAGATATGTAGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTTTATATTATCCTAGCTGCC---------GTT---GCTACAGTATCAGCG---GGTATT------------------------------------TTCTGGAGA---CTATTAATTGGTACTTTAGTAATGCTAGTTGCTGGTTACATGGGTGAA---------GCT------------------GGT------TTC---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGCTGGA---TTTATTGTTGGTTTAGCTGGTTGGGCATACATCTTATATGAAATC---------------TTT------GCC---GGTGAGGCTGGAAAAGCTGCAGCTGAC------AAA---TGTCCTGCTGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATTGTAACTATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCTTTAGGATATTTCTTTGGTTACCTA---------------------------------------ACTGGTGGTGCCGATGCAGTTACATTAAACGTTATCTATAACGTAGCTGACGTTGTCAATAAGATCGCTTTTGTCGCAGTTATTTGGGCTGCTGCAACTGCTTCT---TCTGGCAAAAAAGCT------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------MIKFLKSMAIPTAALVALPGIASASVGLQPNDFVGISFWVISMCMVAATAFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GETPTVYRYVDW--------LITVPLQMIEFYIILAA---V-ATVSA-GI------------FWR-LLIGTLVMLVAGYMGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTI---------------------GW---AIYPLGYFFGYL-------------TGGADAVTLNVIYNVADVVNKIAFVAVIWAAATAS-SGKKA------------------------------------ [IV-Proteo4-b]_1105101197790 [IV-Proteo4-b] JCVI_ORF_1105101197790_GS030_Warm_Seep_19m jcvi|1105101197790| 1105101197790 JCVI ORF 1105101197790 1105101197790 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 09-FEB-2004 Warm_Seep/19m_depth/S_n.a/GS030/Warm_seep/Roca_Redonda/Galapagos_Islands Red Sea marine 0.27222222 -91.63333 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGATTAAGTTTTTTAAATCAATGGCTATCCCAACAGCTGCTTTAGTGGCACTGCCTGGTATAGCTTCTGCGAGCGTTGGCCTACAGCCAACCGACTTTGTTGGGATATCTTTTTGGGTTATCTCTATGTGTATGGTTGCTGCAACCGCATTTTTCTTTTTAGAGACTAATAATGTATCAGGTAAATGGAAAACTTCATTAGCACTTGGTGGTTTAGTATGTTTAGTTGCCGCAGTTCACTACTTCTATATGAGAGAAGTATGGGTAACAACAGGTGAAACACCTACTGTTTACAGATATGTAGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTTTATATTATCCTAGCTGCCGTTGCTACAGTATCAGCAGGTATTTTCTGGAGACTATTAATTGGTACTTTAGTAATGCTAGTTGCTGGTTACATGGGTGAAGCTGGTTTCATCAATGCATGGGCTGGATTTATTGTTGGTATGGCTGGTTGGGCATACATCTTATATGAGATCTTTGCTGGTGAGGCTGGAAAAGCTGCAGCTGACAAATGTCCTGCTGCTGTTCAAACAGCTTTCAACACAATGAGATGGATTGTAACTATTGGTTGGGCTATTTATCCTTTAGGATATTTCTTTGGTTACCTAACTGGTGGTGCCGATGCAGTTACATTAAACGTTATCTACAACGTAGCTGACGTTGTCAATAAGATCGCTTTTGTCGCAGTTATTTGGGCTGCTGCAACTGCTTCTTCTGGCAAAAAAGCT MIKFFKSMAIPTAALVALPGIASASVGLQPTDFVGISFWVISMCMVAATAFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGETPTVYRYVDWLITVPLQMIEFYIILAAVATVSAGIFWRLLIGTLVMLVAGYMGEAGFINAWAGFIVGMAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTIGWAIYPLGYFFGYLTGGADAVTLNVIYNVADVVNKIAFVAVIWAAATASSGKKA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGATTAAGTTTTTTAAATCAATGGCTATCCCAACAGCTGCTTTAGTGGCACTGCCTGGTATAGCTTCTGCGAGCGTTGGCCTACAGCCAACCGACTTTGTTGGGATATCTTTTTGGGTTATCTCTATGTGTATGGTTGCTGCAACCGCATTTTTCTTTTTAGAGACTAATAATGTATCAGGT---AAATGGAAAACTTCATTAGCACTTGGTGGTTTAGTATGTTTAGTTGCCGCAGTTCACTACTTCTATATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGAAACACCTACTGTTTACAGATATGTAGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTTTATATTATCCTAGCTGCC---------GTT---GCTACAGTATCAGCA---GGTATT------------------------------------TTCTGGAGA---CTATTAATTGGTACTTTAGTAATGCTAGTTGCTGGTTACATGGGTGAA---------GCT------------------GGT------TTC---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGCTGGA---TTTATTGTTGGTATGGCTGGTTGGGCATACATCTTATATGAGATC---------------TTT------GCT---GGTGAGGCTGGAAAAGCTGCAGCTGAC------AAA---TGTCCTGCTGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATTGTAACTATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCTTTAGGATATTTCTTTGGTTACCTA---------------------------------------ACTGGTGGTGCCGATGCAGTTACATTAAACGTTATCTACAACGTAGCTGACGTTGTCAATAAGATCGCTTTTGTCGCAGTTATTTGGGCTGCTGCAACTGCTTCT---TCTGGCAAAAAAGCT------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------MIKFFKSMAIPTAALVALPGIASASVGLQPTDFVGISFWVISMCMVAATAFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GETPTVYRYVDW--------LITVPLQMIEFYIILAA---V-ATVSA-GI------------FWR-LLIGTLVMLVAGYMGE---A------G--F-----------I----------------------NA------WAG-FIVGMAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTI---------------------GW---AIYPLGYFFGYL-------------TGGADAVTLNVIYNVADVVNKIAFVAVIWAAATAS-SGKKA------------------------------------ [IV-Proteo4-b]_1105156437590 [IV-Proteo4-b] JCVI_ORF_1105156437590_GS027_Coastal_3m jcvi|1105156437590| 1105156437590 JCVI ORF 1105156437590 1105156437590 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 04-FEB-2004 Coastal/3m_depth/S_34.9_psu/GS027/Devils_Crown/Floreana_Island/Galapagos_Islands Pacific Ocean marine -1.2161111 -90.422775 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGATTAAGTTTTTAAAATCTATGGCTATCCCAACAGCTGCTTTAGTAGCACTGCCTGGCATAGCTTCTGCGAGCGTTGGCTTACAGCCAACTGACTTTGTTGGGATATCTTTTTGGGTTATCTCTATGTGTATGGTTGCTGCAACAGCATTTTTCTTTCTAGAAACTAATAATGTATCAGGCAAATGGAAAACTTCATTAGCACTTGGTGGTTTAGTATGTTTAGTTGCTGCAGTTCACTACTTCTACATGAGAGAAGTATGGGTAACAACAGGTGAAACACCTACTGTTTACAGATATGTAGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTCTATATAATTCTGGCTGCCGTTGCTACAGTATCAGCAGGTATTTTCTGGAGACTATTAATTGGTACTTTAGTTATGCTAGTTGCTGGTTACATGGGTGAAGCTGGTTTCATCAATGCATGGGCTGGATTTATTGTTGGTATGGCTGGTTGGGCATACATTTTGTATGAAATCTTTGCTGGTGAGGCTGGAAAAGCTGCGGCTGACAAATGTCCTGCTGCTGTTCAAACAGCTTTCAACACAATGAGATGGATTGTAACTATTGGTTGGGCCATTTATCCTTTAGGATATTTCTTTGGTTACCTAACTGGTGGTGCTGATGCAGTTACATTAAACGTTATCTATAACGTTGCTGACGTTGTTAATAAGATCGCTTTTGTCGCAGTTATTTGGGCTGCTGCAACTGCTTCTTCTGGCAAAAAGCTTAATAATCAA MIKFLKSMAIPTAALVALPGIASASVGLQPTDFVGISFWVISMCMVAATAFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGETPTVYRYVDWLITVPLQMIEFYIILAAVATVSAGIFWRLLIGTLVMLVAGYMGEAGFINAWAGFIVGMAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTIGWAIYPLGYFFGYLTGGADAVTLNVIYNVADVVNKIAFVAVIWAAATASSGKKLNNQ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGATTAAGTTTTTAAAATCTATGGCTATCCCAACAGCTGCTTTAGTAGCACTGCCTGGCATAGCTTCTGCGAGCGTTGGCTTACAGCCAACTGACTTTGTTGGGATATCTTTTTGGGTTATCTCTATGTGTATGGTTGCTGCAACAGCATTTTTCTTTCTAGAAACTAATAATGTATCAGGC---AAATGGAAAACTTCATTAGCACTTGGTGGTTTAGTATGTTTAGTTGCTGCAGTTCACTACTTCTACATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGAAACACCTACTGTTTACAGATATGTAGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTCTATATAATTCTGGCTGCC---------GTT---GCTACAGTATCAGCA---GGTATT------------------------------------TTCTGGAGA---CTATTAATTGGTACTTTAGTTATGCTAGTTGCTGGTTACATGGGTGAA---------GCT------------------GGT------TTC---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGCTGGA---TTTATTGTTGGTATGGCTGGTTGGGCATACATTTTGTATGAAATC---------------TTT------GCT---GGTGAGGCTGGAAAAGCTGCGGCTGAC------AAA---TGTCCTGCTGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATTGTAACTATT---------------------------------------------------------------GGTTGG---------GCCATTTATCCTTTAGGATATTTCTTTGGTTACCTA---------------------------------------ACTGGTGGTGCTGATGCAGTTACATTAAACGTTATCTATAACGTTGCTGACGTTGTTAATAAGATCGCTTTTGTCGCAGTTATTTGGGCTGCTGCAACTGCTTCT---TCTGGCAAAAAGCTTAATAATCAA--------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------MIKFLKSMAIPTAALVALPGIASASVGLQPTDFVGISFWVISMCMVAATAFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GETPTVYRYVDW--------LITVPLQMIEFYIILAA---V-ATVSA-GI------------FWR-LLIGTLVMLVAGYMGE---A------G--F-----------I----------------------NA------WAG-FIVGMAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTI---------------------GW---AIYPLGYFFGYL-------------TGGADAVTLNVIYNVADVVNKIAFVAVIWAAATAS-SGKKLNNQ--------------------------------- [IV-Proteo4-b]_1105099460348 [IV-Proteo4-b] JCVI_ORF_1105099460348_GS018_Open_Ocean_2m jcvi|1105099460348| 1105099460348 JCVI ORF 1105099460348 1105099460348 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 10-janv-04 Open_Ocean/2m_depth/S_35.4_psu/GS018/Rosario_Bank/Caribbean_Sea Caribbean Sea marine 18.036667 -83.78472 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGATTAAGTTTTTAAAATCAATGGCTATCCCAACAGCTGCTTTAGTGGCACTGCCTGGTATAGCTTCTGCAAGCGTTGGCCTTCAGCCAACTGACTTTGTTGGGATATCTTTTTGGGTTATCTCTATGTGTATGGTTGCTGCAACCGCATTTTTCTTTTTAGAGACTAATAATGTATCAGGTAAATGGAAAACTTCATTAGCACTTGGTGGTTTAGTATGTTTAGTTGCCGCAGTTCACTACTTCTATATGAGAGAAGTATGGGTAACAACAGGTGAAACACCTACTGTTTACAGATATGTAGACTGGTTAATCACTGTTCCATTACAGATGATTGAATTTTATATTATCCTAGCTGCCGTTGCTACAGTATCAGCAGGTATTTTCTGGAGACTATTAATTGGTACTTTAGTAATGCTAGTTGCTGGTTACATGGGTGAAGCTGGTTTCATCAATGCATGGGCTGGATTTATTGTTGGTATGGCTGGTTGGGCATACATCTTATATGAAATCTTTGCTGGTGAGGCTGGAAAAGCTGCAGCTGACAAATGTCCTGCTGCTGTTCAAACAGCTTTCAACACAATGAGATGGATTGTAACTATTGGTTGGGCTATTTATCCTTTAGGATATTTCTTTGGTTACCTAACTGGTGGTGCCGATGCAGTTACATTAAACGTTATTTATAACGTAGCTGACGTTGTCAATAAGATCGCTTTTGTCGCAGTTATTTGGGCTGCTGCAACTGCTTCTTCTGGCAAAAAAGCT MIKFLKSMAIPTAALVALPGIASASVGLQPTDFVGISFWVISMCMVAATAFFFLETNNVSGKWKTSLALGGLVCLVAAVHYFYMREVWVTTGETPTVYRYVDWLITVPLQMIEFYIILAAVATVSAGIFWRLLIGTLVMLVAGYMGEAGFINAWAGFIVGMAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTIGWAIYPLGYFFGYLTGGADAVTLNVIYNVADVVNKIAFVAVIWAAATASSGKKA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGATTAAGTTTTTAAAATCAATGGCTATCCCAACAGCTGCTTTAGTGGCACTGCCTGGTATAGCTTCTGCAAGCGTTGGCCTTCAGCCAACTGACTTTGTTGGGATATCTTTTTGGGTTATCTCTATGTGTATGGTTGCTGCAACCGCATTTTTCTTTTTAGAGACTAATAATGTATCAGGT---AAATGGAAAACTTCATTAGCACTTGGTGGTTTAGTATGTTTAGTTGCCGCAGTTCACTACTTCTATATGAGAGAAGTATGGGTA------------------------------ACAACA---------------------GGTGAAACACCTACTGTTTACAGATATGTAGACTGG------------------------TTAATCACTGTTCCATTACAGATGATTGAATTTTATATTATCCTAGCTGCC---------GTT---GCTACAGTATCAGCA---GGTATT------------------------------------TTCTGGAGA---CTATTAATTGGTACTTTAGTAATGCTAGTTGCTGGTTACATGGGTGAA---------GCT------------------GGT------TTC---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGCTGGA---TTTATTGTTGGTATGGCTGGTTGGGCATACATCTTATATGAAATC---------------TTT------GCT---GGTGAGGCTGGAAAAGCTGCAGCTGAC------AAA---TGTCCTGCTGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATTGTAACTATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCTTTAGGATATTTCTTTGGTTACCTA---------------------------------------ACTGGTGGTGCCGATGCAGTTACATTAAACGTTATTTATAACGTAGCTGACGTTGTCAATAAGATCGCTTTTGTCGCAGTTATTTGGGCTGCTGCAACTGCTTCT---TCTGGCAAAAAAGCT------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------MIKFLKSMAIPTAALVALPGIASASVGLQPTDFVGISFWVISMCMVAATAFFFLETNNVSG-KWKTSLALGGLVCLVAAVHYFYMREVWV----------TT-------GETPTVYRYVDW--------LITVPLQMIEFYIILAA---V-ATVSA-GI------------FWR-LLIGTLVMLVAGYMGE---A------G--F-----------I----------------------NA------WAG-FIVGMAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTI---------------------GW---AIYPLGYFFGYL-------------TGGADAVTLNVIYNVADVVNKIAFVAVIWAAATAS-SGKKA------------------------------------ [IV-Proteo4-a]_KJ926124 [IV-Proteo4-a] BOUM_OTU037_env_samples gb|KJ926124| Uncultured bacterium clone BOUM OTU037 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU037 putative proteorhodopsin gene, partial cds KJ926124 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 39.0995 5.3403333 #na #na #na #na #na ATTGACTGGATTATCACAGTTCCATTACAAATGATTGAATTCTACTTAATCTTAGCTGCTTGTACAGCAATAGCTGGTGGTGTGTTCTGGAGATTATTTGTTGGTTCATTAGTGATGTTAATTGGTGGATATCTTGGTGAAGCAGGCTTCATTAACGCAACATTAGGTTTTGTTATTGGAATGGCTGGTTGGATATTCATTCTTTATGAAATCTTTGCCGGAGAAGCAAGTAAAGTTAACGCGGCCGAAGCACCAGACTCTGTTAAAACAGCTTACAATACCATGAAATGGATTGTTACTATTGGATGGGCTATATAT IDWIITVPLQMIEFYLILAACTAIAGGVFWRLFVGSLVMLIGGYLGEAGFINATLGFVIGMAGWIFILYEIFAGEASKVNAAEAPDSVKTAYNTMKWIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGACTGG------------------------ATTATCACAGTTCCATTACAAATGATTGAATTCTACTTAATCTTAGCTGCT---------TGT---ACAGCAATAGCTGGT---GGTGTG------------------------------------TTCTGGAGA---TTATTTGTTGGTTCATTAGTGATGTTAATTGGTGGATATCTTGGTGAA---------GCA------------------GGC------TTC---------------------------------ATT------------------------------------------------------------------AACGCA------------------ACATTAGGT---TTTGTTATTGGAATGGCTGGTTGGATATTCATTCTTTATGAAATC---------------TTT------GCC---GGAGAAGCAAGTAAAGTTAACGCGGCC------GAA---GCACCAGACTCTGTT---AAA---ACA---GCT---TAC---AAT---ACCATG---AAATGGATTGTTACTATT---------------------------------------------------------------GGATGG---------GCTATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDW--------IITVPLQMIEFYLILAA---C-TAIAG-GV------------FWR-LFVGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FVIGMAGWIFILYEI-----F--A-GEASKVNAA--E-APDSV-K-T-A-Y-N-TM-KWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-a]_EU915896 [IV-Proteo4-a] US080230_env_samples_EU915896 gi|229358674|gb|EU915896| Uncultured microorganism clone US080230 putative proteorhodopsin gene, partial cds Uncultured microorganism clone US080230 putative proteorhodopsin gene, partial cds EU915896 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_surface_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTGGCCGCTACTGTGTTCTTCTTGATGGAGTCACTTCGTTTTAAAGGTAAGTGGAGAACTTCTATGGTTGTAGGTGCTCTAGTAACTTTAGTTGCTGCAGTTCACTACTTTTACATGAGAGATGTTTGGGCATCAACTGGCGCTTCGCCAACTGTATTCAGATACGTTGACTGGATTGTAACAGTTCCATTACAGATGGTTGAATTTTACTTAATCTTAGCCGCTTGTACTGTTGTTGCAGGTGGAGTTTTCTGGAGATTGTTAGTAGGAACTCTAGTAATGGTTATTGGTGGATATCTTGGAGAAGCAGGATACATCAACGCAACATTAGGTTTTGTTATAGGTATGGCTGGATGGATATTCATTTTATATGAAATCTTTGCAGGAGAAGCTAGCAAAATTAGCGCAGGAAGTGCTCCAGAATCTGTTCAGACAGCTTTTAACACAATGAGATGGATTGTAACAATCGGATGGGCCATCTAC MLAATVFFLMESLRFKGKWRTSMVVGALVTLVAAVHYFYMRDVWASTGASPTVFRYVDWIVTVPLQMVEFYLILAACTVVAGGVFWRLLVGTLVMVIGGYLGEAGYINATLGFVIGMAGWIFILYEIFAGEASKISAGSAPESVQTAFNTMRWIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGTGTTCTTCTTGATGGAGTCACTTCGTTTTAAAGGT---AAGTGGAGAACTTCTATGGTTGTAGGTGCTCTAGTAACTTTAGTTGCTGCAGTTCACTACTTTTACATGAGAGATGTTTGGGCA------------------------------TCAACT---------------------GGCGCTTCGCCAACTGTATTCAGATACGTTGACTGG------------------------ATTGTAACAGTTCCATTACAGATGGTTGAATTTTACTTAATCTTAGCCGCT---------TGT---ACTGTTGTTGCAGGT---GGAGTT------------------------------------TTCTGGAGA---TTGTTAGTAGGAACTCTAGTAATGGTTATTGGTGGATATCTTGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCA------------------ACATTAGGT---TTTGTTATAGGTATGGCTGGATGGATATTCATTTTATATGAAATC---------------TTT------GCA---GGAGAAGCTAGCAAAATTAGCGCAGGA------AGT---GCTCCAGAATCTGTT---CAG---ACA---GCT---TTT---AAC---ACAATG---AGATGGATTGTAACAATC---------------------------------------------------------------GGATGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFLMESLRFKG-KWRTSMVVGALVTLVAAVHYFYMRDVWA----------ST-------GASPTVFRYVDW--------IVTVPLQMVEFYLILAA---C-TVVAG-GV------------FWR-LLVGTLVMVIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIFILYEI-----F--A-GEASKISAG--S-APESV-Q-T-A-F-N-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-a]_EF088636 [IV-Proteo4-a] PF13012_env_samples_EF088636 gi|126843522|gb|EF088636| Uncultured bacterium clone PF13012 putative proteorhodopsin gene, partial cds Uncultured bacterium clone PF13012 putative proteorhodopsin gene, partial cds EF088636 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na surface_water_sample Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTTGCCGCTACTGCGTTCTTCTTCCTTGAGTCTCTAAGAGTTACAGGGAAATTTAGAACATCTTTGGTTGTTGGCGGACTTATTTGTTTGGTTGCAGGCGTTCACTATTTTTACATGAGAGAAGTATGGGCATCTACAGGTACATCTCCAACGGTATTCAGATACGTTGATTGGATTGTAACTGTTCCATTACAGATGGTTGAGTTCTATCTTATTCTTGCTGCCGTTACTGCAGTTTCTATGGGAGTTTTTTGGAGACTATTAATAGGTACTGTTGTTATGGTTGTGGCAGGTTACATGGGTGAAGCTGGTTTTATAAACACAACAATTGGTTTTGTTGTAGGTATGGCTGGTTGGGCTTATATTCTGTATGAGATCTTCTCTGGAGAAGCAAGTAAAAGTGCTGCAAATGCTAAACCTTCGGTTCAGTCAGCTTTCAATACAATGAAATGGATTGTTACTATAGGGTGGGCCATCTACCCA MVAATAFFFLESLRVTGKFRTSLVVGGLICLVAGVHYFYMREVWASTGTSPTVFRYVDWIVTVPLQMVEFYLILAAVTAVSMGVFWRLLIGTVVMVVAGYMGEAGFINTTIGFVVGMAGWAYILYEIFSGEASKSAANAKPSVQSAFNTMKWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGCGTTCTTCTTCCTTGAGTCTCTAAGAGTTACAGGG---AAATTTAGAACATCTTTGGTTGTTGGCGGACTTATTTGTTTGGTTGCAGGCGTTCACTATTTTTACATGAGAGAAGTATGGGCA------------------------------TCTACA---------------------GGTACATCTCCAACGGTATTCAGATACGTTGATTGG------------------------ATTGTAACTGTTCCATTACAGATGGTTGAGTTCTATCTTATTCTTGCTGCC---------GTT---ACTGCAGTTTCTATG---GGAGTT------------------------------------TTTTGGAGA---CTATTAATAGGTACTGTTGTTATGGTTGTGGCAGGTTACATGGGTGAA---------GCT------------------GGT------TTT---------------------------------ATA------------------------------------------------------------------AACACA------------------ACAATTGGT---TTTGTTGTAGGTATGGCTGGTTGGGCTTATATTCTGTATGAGATC---------------TTC------TCT---GGAGAAGCAAGTAAAAGTGCTGCA---------AAT---GCTAAACCTTCGGTT---CAG---TCA---GCT---TTC---AAT---ACAATG---AAATGGATTGTTACTATA---------------------------------------------------------------GGGTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLESLRVTG-KFRTSLVVGGLICLVAGVHYFYMREVWA----------ST-------GTSPTVFRYVDW--------IVTVPLQMVEFYLILAA---V-TAVSM-GV------------FWR-LLIGTVVMVVAGYMGE---A------G--F-----------I----------------------NT------TIG-FVVGMAGWAYILYEI-----F--S-GEASKSAA---N-AKPSV-Q-S-A-F-N-TM-KWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-a]_EF088634 [IV-Proteo4-a] PF13010_env_samples_EF088634 gi|126843518|gb|EF088634| Uncultured bacterium clone PF13010 putative proteorhodopsin gene, partial cds Uncultured bacterium clone PF13010 putative proteorhodopsin gene, partial cds EF088634 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na surface_water_sample Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTTGCCGCTACTGTGTTCTTCTTCCTTGAGTCTCTAAGAGTTACAGGAAAATTTAGAACATCTTTGGTTGTTGGCGGACTTATTTGTTTGGTTGCAGGCGTTCACTATTTTTACATGAGAGAAGTATGGGCATCTACAGGTACATCTCCAACGGTATTCAGATATGTTGATTGGATTGTAACTGTTCCATTACAGATGGTTGAGTTCTATCTTATTCTTGCTGCTGTTACTGCAGTTTCTATGGGAGTCTTTTGGAGACTATTAATAGGTACTGTTGTTATGGTTGTGGCAGGTTATATGGGTGAAGCTGGTTTTATAAACACAACGATTGGTTTTGTTGTAGGTATGGCTGGTTGGGCTTATATTCTGTATGAGATCTTCTCTGGAGAAGCAAGTAAAAGTGCTGCAAATGCTAAACCTTCGGTTCAGTCAGCTTTCGATACAATGAAATGGATTGTTACTATAGGCTGGGCTATCTACCCA MVAATVFFFLESLRVTGKFRTSLVVGGLICLVAGVHYFYMREVWASTGTSPTVFRYVDWIVTVPLQMVEFYLILAAVTAVSMGVFWRLLIGTVVMVVAGYMGEAGFINTTIGFVVGMAGWAYILYEIFSGEASKSAANAKPSVQSAFDTMKWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTGTTCTTCTTCCTTGAGTCTCTAAGAGTTACAGGA---AAATTTAGAACATCTTTGGTTGTTGGCGGACTTATTTGTTTGGTTGCAGGCGTTCACTATTTTTACATGAGAGAAGTATGGGCA------------------------------TCTACA---------------------GGTACATCTCCAACGGTATTCAGATATGTTGATTGG------------------------ATTGTAACTGTTCCATTACAGATGGTTGAGTTCTATCTTATTCTTGCTGCT---------GTT---ACTGCAGTTTCTATG---GGAGTC------------------------------------TTTTGGAGA---CTATTAATAGGTACTGTTGTTATGGTTGTGGCAGGTTATATGGGTGAA---------GCT------------------GGT------TTT---------------------------------ATA------------------------------------------------------------------AACACA------------------ACGATTGGT---TTTGTTGTAGGTATGGCTGGTTGGGCTTATATTCTGTATGAGATC---------------TTC------TCT---GGAGAAGCAAGTAAAAGTGCTGCA---------AAT---GCTAAACCTTCGGTT---CAG---TCA---GCT---TTC---GAT---ACAATG---AAATGGATTGTTACTATA---------------------------------------------------------------GGCTGG---------GCTATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLESLRVTG-KFRTSLVVGGLICLVAGVHYFYMREVWA----------ST-------GTSPTVFRYVDW--------IVTVPLQMVEFYLILAA---V-TAVSM-GV------------FWR-LLIGTVVMVVAGYMGE---A------G--F-----------I----------------------NT------TIG-FVVGMAGWAYILYEI-----F--S-GEASKSAA---N-AKPSV-Q-S-A-F-D-TM-KWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo4-a]_EU915786 [IV-Proteo4-a] PF97543_env_samples_EU915786 gi|229358454|gb|EU915786| Uncultured microorganism clone PF97543 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF97543 putative proteorhodopsin gene, partial cds EU915786 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGCGTTCTTCTTCCTAGAGTCTCTAAGAGTTCAAGGTAAGTTTAGAACATCATTAGTAGTTGGTGGTCTTATTTGTTTGGTTGCAGGCGTACACTATTTCTATATGAGAGAAGTGTGGGCTTCTACAGGTTCATCTCCAACTGTATTCAGATACGTTGACTGGATTGTAACCGTTCCACTTCAAATGGTTGAATTCTATCTCATATTAGCTGCTGTTACAGCTGTATCACTTGGTGTCTTCTGGAGACTTCTAATTGGTACTGTTGTTATGGTTGTTGCAGGTTATTTAGGCGAAGCTGGCTTCATTGATACAACAATTGGTTTTGTTGTAGGAATGGGTGGTTGGGCTTATATCCTGTATGAGATCTTCTCAGGCGAAGCAAGTGCTAGTGCTTCTAAAGCTGCACCTGCTGTTCAATCCGCATTTAATACAATGAAATGGATTGTAACCATTGGCTGGGCAATCTAT MVAATAFFFLESLRVQGKFRTSLVVGGLICLVAGVHYFYMREVWASTGSSPTVFRYVDWIVTVPLQMVEFYLILAAVTAVSLGVFWRLLIGTVVMVVAGYLGEAGFIDTTIGFVVGMGGWAYILYEIFSGEASASASKAAPAVQSAFNTMKWIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCGTTCTTCTTCCTAGAGTCTCTAAGAGTTCAAGGT---AAGTTTAGAACATCATTAGTAGTTGGTGGTCTTATTTGTTTGGTTGCAGGCGTACACTATTTCTATATGAGAGAAGTGTGGGCT------------------------------TCTACA---------------------GGTTCATCTCCAACTGTATTCAGATACGTTGACTGG------------------------ATTGTAACCGTTCCACTTCAAATGGTTGAATTCTATCTCATATTAGCTGCT---------GTT---ACAGCTGTATCACTT---GGTGTC------------------------------------TTCTGGAGA---CTTCTAATTGGTACTGTTGTTATGGTTGTTGCAGGTTATTTAGGCGAA---------GCT------------------GGC------TTC---------------------------------ATT------------------------------------------------------------------GATACA------------------ACAATTGGT---TTTGTTGTAGGAATGGGTGGTTGGGCTTATATCCTGTATGAGATC---------------TTC------TCA---GGCGAAGCAAGTGCT---AGTGCTTCT------AAA---GCTGCACCTGCTGTT---CAA---TCC---GCA---TTT---AAT---ACAATG---AAATGGATTGTAACCATT---------------------------------------------------------------GGCTGG---------GCAATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLESLRVQG-KFRTSLVVGGLICLVAGVHYFYMREVWA----------ST-------GSSPTVFRYVDW--------IVTVPLQMVEFYLILAA---V-TAVSL-GV------------FWR-LLIGTVVMVVAGYLGE---A------G--F-----------I----------------------DT------TIG-FVVGMGGWAYILYEI-----F--S-GEASA-SAS--K-AAPAV-Q-S-A-F-N-TM-KWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo4-a]_KJ926125 [IV-Proteo4-a] BOUM_OTU038_env_samples gb|KJ926125| Uncultured bacterium clone BOUM OTU038 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU038 putative proteorhodopsin gene, partial cds KJ926125 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 33.709667 32.644667 #na #na #na #na #na GTTGATTGGATTGTTACTGTACCATTACAAATGGTTGAGTTTTACTTAATACTTGCTGCTTGTACTGCTGTAGCAGGCGGAGTTTTCTGGAGACTTTTCTTAGGTTCATTAGTAATGTTAATAGCTGGTTACCTAGGTGAAGCTGGAATGATAAACGCAACTATTGGTTTTGTTGTTGGTATAGCTGGATGGCTTTACATACTTTATGAAATCTTTGCAGGTGAGGCAGGAAAAGTTAGTGCTGCTGATGCTCCTGCTTCAGTCCAATCAGCATTTAACACTATGCGTTGGATTGTAACAATAGGCTGGGCAATATAC VDWIVTVPLQMVEFYLILAACTAVAGGVFWRLFLGSLVMLIAGYLGEAGMINATIGFVVGIAGWLYILYEIFAGEAGKVSAADAPASVQSAFNTMRWIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGATTGG------------------------ATTGTTACTGTACCATTACAAATGGTTGAGTTTTACTTAATACTTGCTGCT---------TGT---ACTGCTGTAGCAGGC---GGAGTT------------------------------------TTCTGGAGA---CTTTTCTTAGGTTCATTAGTAATGTTAATAGCTGGTTACCTAGGTGAA---------GCT------------------GGA------ATG---------------------------------ATA------------------------------------------------------------------AACGCA------------------ACTATTGGT---TTTGTTGTTGGTATAGCTGGATGGCTTTACATACTTTATGAAATC---------------TTT------GCA---GGTGAGGCAGGAAAAGTTAGTGCTGCT------GAT---GCTCCTGCTTCAGTC---CAA---TCA---GCA---TTT---AAC---ACTATG---CGTTGGATTGTAACAATA---------------------------------------------------------------GGCTGG---------GCAATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------IVTVPLQMVEFYLILAA---C-TAVAG-GV------------FWR-LFLGSLVMLIAGYLGE---A------G--M-----------I----------------------NA------TIG-FVVGIAGWLYILYEI-----F--A-GEAGKVSAA--D-APASV-Q-S-A-F-N-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422680 [IV-Alpha7-HOT2C01] clone_med-tb04-20m-e1_DQ422680 gi|90024880|gb|DQ422680| Uncultured bacterium clone med-tb04-20m-e1 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-e1 putative proteorhodopsin gene, partial cds. DQ422680 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na CGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTAGGTTGGGCTATTTATCCAGCCAGTCTATATATCT RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYPASLYI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCAGCCAGTCTATATATC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYPASLYI--------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422721 [IV-Alpha7-HOT2C01] clone_med-tb04-20m-h4_DQ422721 gi|90024962|gb|DQ422721| Uncultured bacterium clone med-tb04-20m-h4 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-h4 putative proteorhodopsin gene, partial cds. DQ422721 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAGTGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTAGGTTGGGCAATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMSVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AGTGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------SV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422632 [IV-Alpha7-HOT2C01] clone_med-tb04-0m-h8_DQ422632 gi|90024784|gb|DQ422632| Uncultured bacterium clone med-tb04-0m-h8 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-h8 putative proteorhodopsin gene, partial cds. DQ422632 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCCTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTATCGCGTTGAGATTAATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFIALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCCTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---ATC---GCGTTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-I-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422551 [IV-Alpha7-HOT2C01] clone_med-tb04-0m-a8_DQ422551 gi|90024622|gb|DQ422551| Uncultured bacterium clone med-tb04-0m-a8 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-a8 putative proteorhodopsin gene, partial cds. DQ422551 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422707 [IV-Alpha7-HOT2C01] clone_med-tb04-20m-g12_DQ422707 gi|90024934|gb|DQ422707| Uncultured bacterium clone med-tb04-20m-g12 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-g12 putative proteorhodopsin gene, partial cds. DQ422707 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422160 [IV-Alpha7-HOT2C01] clone_med-0m-a8_DQ422160 gi|90023840|gb|DQ422160| Uncultured bacterium clone med-0m-a8 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-a8 putative proteorhodopsin gene, partial cds. DQ422160 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATTGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422334 [IV-Alpha7-HOT2C01] clone_med-20m-h10_DQ422334 gi|90024188|gb|DQ422334| Uncultured bacterium clone med-20m-h10 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-h10 putative proteorhodopsin gene, partial cds. DQ422334 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATATATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATTGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422711 [IV-Alpha7-HOT2C01] clone_med-tb04-20m-g5_DQ422711 gi|90024942|gb|DQ422711| Uncultured bacterium clone med-tb04-20m-g5 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-g5 putative proteorhodopsin gene, partial cds. DQ422711 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422481 [IV-Alpha7-HOT2C01] clone_med-tb04-50m-c9_DQ422481 gi|90024482|gb|DQ422481| Uncultured bacterium clone med-tb04-50m-c9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-c9 putative proteorhodopsin gene, partial cds. DQ422481 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGCTTAACGCGTTGAGATTAATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAALNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---CTT---AAC---GCGTTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-L-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422229 [IV-Alpha7-HOT2C01] clone_med-0m-g8_DQ422229 gi|90023978|gb|DQ422229| Uncultured bacterium clone med-0m-g8 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-g8 putative proteorhodopsin gene, partial cds. DQ422229 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTCGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTCGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422648 [IV-Alpha7-HOT2C01] clone_med-tb04-20m-b2_DQ422648 gi|90024816|gb|DQ422648| Uncultured bacterium clone med-tb04-20m-b2 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-b2 putative proteorhodopsin gene, partial cds. DQ422648 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422482 [IV-Alpha7-HOT2C01] clone_med-tb04-50m-d1_DQ422482 gi|90024484|gb|DQ422482| Uncultured bacterium clone med-tb04-50m-d1 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-d1 putative proteorhodopsin gene, partial cds. DQ422482 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATTACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATTACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422349 [IV-Alpha7-HOT2C01] clone_50-5_DQ422349 gi|90024218|gb|DQ422349| Uncultured bacterium clone 50-5 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 50-5 putative proteorhodopsin gene, partial cds. DQ422349 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422279 [IV-Alpha7-HOT2C01] clone_med-20m-c3_DQ422279 gi|90024078|gb|DQ422279| Uncultured bacterium clone med-20m-c3 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-c3 putative proteorhodopsin gene, partial cds. DQ422279 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422720 [IV-Alpha7-HOT2C01] clone_med-tb04-20m-h3_DQ422720 gi|90024960|gb|DQ422720| Uncultured bacterium clone med-tb04-20m-h3 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-h3 putative proteorhodopsin gene, partial cds. DQ422720 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422663 [IV-Alpha7-HOT2C01] clone_med-tb04-20m-c5_DQ422663 gi|90024846|gb|DQ422663| Uncultured bacterium clone med-tb04-20m-c5 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-c5 putative proteorhodopsin gene, partial cds. DQ422663 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTTTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAGGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGTAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTTTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAG---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGTAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422658 [IV-Alpha7-HOT2C01] clone_med-tb04-20m-c11_DQ422658 gi|90024836|gb|DQ422658| Uncultured bacterium clone med-tb04-20m-c11 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-c11 putative proteorhodopsin gene, partial cds. DQ422658 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422592 [IV-Alpha7-HOT2C01] clone_med-tb04-0m-e3_DQ422592 gi|90024704|gb|DQ422592| Uncultured bacterium clone med-tb04-0m-e3 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-e3 putative proteorhodopsin gene, partial cds. DQ422592 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAATGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCTATTTACCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAATGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422722 [IV-Alpha7-HOT2C01] clone_med-tb04-20m-h5_DQ422722 gi|90024964|gb|DQ422722| Uncultured bacterium clone med-tb04-20m-h5 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-h5 putative proteorhodopsin gene, partial cds. DQ422722 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAATGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCGATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAATGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCGATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422565 [IV-Alpha7-HOT2C01] clone_med-tb04-0m-c1_DQ422565 gi|90024650|gb|DQ422565| Uncultured bacterium clone med-tb04-0m-c1 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-c1 putative proteorhodopsin gene, partial cds. DQ422565 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAATGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAATGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422552 [IV-Alpha7-HOT2C01] clone_med-tb04-0m-a9_DQ422552 gi|90024624|gb|DQ422552| Uncultured bacterium clone med-tb04-0m-a9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-a9 putative proteorhodopsin gene, partial cds. DQ422552 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACTGTGCCCCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAATGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCCCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAATGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422585 [IV-Alpha7-HOT2C01] clone_med-tb04-0m-d8_DQ422585 gi|90024690|gb|DQ422585| Uncultured bacterium clone med-tb04-0m-d8 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-d8 putative proteorhodopsin gene, partial cds. DQ422585 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAATGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAATGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422629 [IV-Alpha7-HOT2C01] clone_med-tb04-0m-h5_DQ422629 gi|90024778|gb|DQ422629| Uncultured bacterium clone med-tb04-0m-h5 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-h5 putative proteorhodopsin gene, partial cds. DQ422629 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422451 [IV-Alpha7-HOT2C01] clone_med-tb04-50m-a12_DQ422451 gi|90024422|gb|DQ422451| Uncultured bacterium clone med-tb04-50m-a12 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-a12 putative proteorhodopsin gene, partial cds. DQ422451 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATTACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTGGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCATTGAGATTGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATTACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTGGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCATTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422490 [IV-Alpha7-HOT2C01] clone_med-tb04-50m-d6_DQ422490 gi|90024500|gb|DQ422490| Uncultured bacterium clone med-tb04-50m-d6 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-d6 putative proteorhodopsin gene, partial cds. DQ422490 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATTACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTGGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCATTGAGATTGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATTACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTGGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCATTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422363 [IV-Alpha7-HOT2C01] clone_med-50m-a8_DQ422363 gi|90024246|gb|DQ422363| Uncultured bacterium clone med-50m-a8 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-a8 putative proteorhodopsin gene, partial cds. DQ422363 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTGGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGCGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCATTGAGATTGATCGTTACAGTAGGTTGGGCTATTTACCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTGGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGCGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCATTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU079253 [IV-Alpha7-HOT2C01] clone_B_Mtd1_008_EU079253 gi|156106665|gb|EU079253| Uncultured organism clone B Mtd1 008 putative proteorhodopsin gene, partial cds. Uncultured organism clone B Mtd1 008 putative proteorhodopsin gene, partial cds. EU079253 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; na light-energy conversion (ion transport) unknown [unclassified sequences/environmental samples] taxon:155900 genomic DNA other 27-FEB-2008 #na Sargasso Sea surface water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99-109 (2008) 18211270 #na GTAATTCTTGCGGCCATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTGGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCA VILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAATTCTTGCGGCC---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTGGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG---------------------------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422650 [IV-Alpha7-HOT2C01] clone_med-tb04-20m-b4_DQ422650 gi|90024820|gb|DQ422650| Uncultured bacterium clone med-tb04-20m-b4 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-b4 putative proteorhodopsin gene, partial cds. DQ422650 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTACGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTTTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCATTGAGATTGATCGTTACAGTAGGTTGGGCTATATATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTACGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTTTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCATTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422683 [IV-Alpha7-HOT2C01] clone_med-tb04-20m-e12_DQ422683 gi|90024886|gb|DQ422683| Uncultured bacterium clone med-tb04-20m-e12 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-e12 putative proteorhodopsin gene, partial cds. DQ422683 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGTTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATCGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGGATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCATTGAGATTGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTVVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGTTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATCGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGGATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCATTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TVVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422687 [IV-Alpha7-HOT2C01] clone_med-tb04-20m-e5_DQ422687 gi|90024894|gb|DQ422687| Uncultured bacterium clone med-tb04-20m-e5 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-e5 putative proteorhodopsin gene, partial cds. DQ422687 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATCGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGGATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCATTGAGATTGATCGTTACAGTAGGTTGGGCGATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATCGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGGATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCATTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCGATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422647 [IV-Alpha7-HOT2C01] clone_med-tb04-20m-b12_DQ422647 gi|90024814|gb|DQ422647| Uncultured bacterium clone med-tb04-20m-b12 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-b12 putative proteorhodopsin gene, partial cds. DQ422647 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATTACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATCGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGCGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCATTGAGATTGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATTACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATCGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGCGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCATTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU079263 [IV-Alpha7-HOT2C01] clone_B_Mtd1_001_EU079263 gi|156106685|gb|EU079263| Uncultured organism clone B Mtd1 001 putative proteorhodopsin gene, partial cds. Uncultured organism clone B Mtd1 001 putative proteorhodopsin gene, partial cds. EU079263 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; na light-energy conversion (ion transport) unknown [unclassified sequences/environmental samples] taxon:155900 genomic DNA other 27-FEB-2008 #na Sargasso Sea surface water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99-109 (2008) 18211270 #na GTAATTCTTGCGGCTATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATCGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAATGCTGCCGGTCA VILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAATTCTTGCGGCT---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATCGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAATGCTGCCGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG---------------------------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU079259 [IV-Alpha7-HOT2C01] clone_B_Mtd1_002_EU079259 gi|156106677|gb|EU079259| Uncultured organism clone B Mtd1 002 putative proteorhodopsin gene, partial cds. Uncultured organism clone B Mtd1 002 putative proteorhodopsin gene, partial cds. EU079259 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; na light-energy conversion (ion transport) unknown [unclassified sequences/environmental samples] taxon:155900 genomic DNA other 27-FEB-2008 #na Sargasso Sea surface water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99-109 (2008) 18211270 #na GTAATTCTTGCGGCTATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATCGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGATAGTGGAAACGCTGCCGGTCA VILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASADSGNAAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAATTCTTGCGGCT---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATCGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGAT------AGT---GGAAACGCTGCCGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAD--S-GNAAG---------------------------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422161 [IV-Alpha7-HOT2C01] clone_med-0m-a9_DQ422161 gi|90023842|gb|DQ422161| Uncultured bacterium clone med-0m-a9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-a9 putative proteorhodopsin gene, partial cds. DQ422161 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCATTGAGATTAATCGTTACAGTAGGTTGGGCCATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCATTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422579 [IV-Alpha7-HOT2C01] clone_med-tb04-0m-d2_DQ422579 gi|90024678|gb|DQ422579| Uncultured bacterium clone med-tb04-0m-d2 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-d2 putative proteorhodopsin gene, partial cds. DQ422579 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCATTGAGATTAATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCATTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422614 [IV-Alpha7-HOT2C01] clone_med-tb04-0m-g12_DQ422614 gi|90024748|gb|DQ422614| Uncultured bacterium clone med-tb04-0m-g12 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-g12 putative proteorhodopsin gene, partial cds. DQ422614 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGGGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAAGCAAGTGCTGGTGGCGGAAACGCTGCTGGTCAAGCTGCGTCTAACGCATTGAGATTGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGGGNAAGQAASNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGG------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAAGCAAGTGCTGGT------GGC---GGAAACGCTGCTGGT---CAA---GCT---GCG---TCT---AAC---GCATTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--G-GNAAG-Q-A-A-S-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422406 [IV-Alpha7-HOT2C01] clone_med-50m-e3_DQ422406 gi|90024332|gb|DQ422406| Uncultured bacterium clone med-50m-e3 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-e3 putative proteorhodopsin gene, partial cds. DQ422406 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTGGGTGAAGTCGGGGCGATGAATGTAACACTAGCCTTCGTAATTGGAATGGCTGGATGGTTATATATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCATTGAGATTGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTGGGTGAA---------GTC------------------GGG------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTAGCC---TTCGTAATTGGAATGGCTGGATGGTTATATATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCATTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422622 [IV-Alpha7-HOT2C01] clone_med-tb04-0m-g9_DQ422622 gi|90024764|gb|DQ422622| Uncultured bacterium clone med-tb04-0m-g9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-g9 putative proteorhodopsin gene, partial cds. DQ422622 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTGGGTGAAGTCGGGGCGATGAATGTAACACTAGCCTTCGTAATTGGAATGGCTGGATGGTTATATATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCATTGAGATTGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTGGGTGAA---------GTC------------------GGG------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTAGCC---TTCGTAATTGGAATGGCTGGATGGTTATATATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCATTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422639 [IV-Alpha7-HOT2C01] clone_med-tb04-20m-a5_DQ422639 gi|90024798|gb|DQ422639| Uncultured bacterium clone med-tb04-20m-a5 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-a5 putative proteorhodopsin gene, partial cds. DQ422639 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACACTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCATTGAGATTGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCATTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422563 [IV-Alpha7-HOT2C01] clone_med-tb04-0m-b8_DQ422563 gi|90024646|gb|DQ422563| Uncultured bacterium clone med-tb04-0m-b8 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-b8 putative proteorhodopsin gene, partial cds. DQ422563 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATATATTGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATCGCATCAATAGTGATGTTGGTTGGTGGCTATCTAGGTGAAGTCGGAGCGATGAATGTAACACTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCATTGAGATTGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATCGCATCAATAGTGATGTTGGTTGGTGGCTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCATTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422653 [IV-Alpha7-HOT2C01] clone_med-tb04-20m-b7_DQ422653 gi|90024826|gb|DQ422653| Uncultured bacterium clone med-tb04-20m-b7 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-b7 putative proteorhodopsin gene, partial cds. DQ422653 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATCGCATCAATAGTGATGTTGGTTGGTGGCTATCTAGGTGAAGTCGGAGCGATGAATGTAACACTAGCCTTCGTAATAGGGATGGCTGGATGGTTATATATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGCCAAGCTGCGTTTAACGCATTGAGATTGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATCGCATCAATAGTGATGTTGGTTGGTGGCTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTAGCC---TTCGTAATAGGGATGGCTGGATGGTTATATATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGC---CAA---GCT---GCG---TTT---AAC---GCATTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ203325 [IV-Alpha7-HOT2C01] SS114a80E3_env_samples_DQ203325 gi|77547098|gb|DQ203325| Uncultured bacterium clone SS114a80E3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a80E3 predicted proteorhodopsin gene, partial cds DQ203325 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_80m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_2003 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATACATTGACTGGTTGATCACTGTGCCACTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCATTGAGATTGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATTGACTGG------------------------TTGATCACTGTGCCACTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCATTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU079260 [IV-Alpha7-HOT2C01] clone_B_Mtd1_011_EU079260 gi|156106679|gb|EU079260| Uncultured organism clone B Mtd1 011 putative proteorhodopsin gene, partial cds. Uncultured organism clone B Mtd1 011 putative proteorhodopsin gene, partial cds. EU079260 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; na light-energy conversion (ion transport) unknown [unclassified sequences/environmental samples] taxon:155900 genomic DNA other 27-FEB-2008 #na Sargasso Sea surface water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99-109 (2008) 18211270 #na GTAATTCTTGCAGCCATGACTGCTGTTGCTTCAGGCGTATTCTGGAGACTATTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACACTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAATGCTGCCGGTCA VILAAMTAVASGVFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAATTCTTGCAGCC---------ATG---ACTGCTGTTGCTTCA---GGCGTA------------------------------------TTCTGGAGA---CTATTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAATGCTGCCGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VILAA---M-TAVAS-GV------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG---------------------------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU079182 [IV-Alpha7-HOT2C01] NASB_5_env_samples_EU079182 gi|156106524|gb|EU079182| Uncultured organism clone NASB 5 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 5 putative proteorhodopsin gene, partial cds EU079182 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGGTATGTTGATTGGTTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGGGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAAGCAAGTGCTGGTAGCGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCATTGAGATTGATCGTTACAGTAGGCTGGGCAATATAC RYVDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTATGTTGATTGG------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGG------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAAGCAAGTGCTGGT------AGC---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCATTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGCTGG---------GCAATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU079226 [IV-Alpha7-HOT2C01] NASB_94_env_samples_EU079226 gi|156106611|gb|EU079226| Uncultured organism clone NASB 94 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 94 putative proteorhodopsin gene, partial cds EU079226 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGTTATGTAGATTGGTTGATCACTGTGCCTCTACAAATTGTAGAGTTCTACGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTAGGCTGGGCAATATAT RYVDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTATGTAGATTGG------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTACGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGCTGG---------GCAATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU079199 [IV-Alpha7-HOT2C01] NASB_56_env_samples_EU079199 gi|156106558|gb|EU079199| Uncultured organism clone NASB 56 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 56 putative proteorhodopsin gene, partial cds EU079199 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGATATGTTGATTGGTTGATTACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAAATTTTTGCAGGAGAAGCAAGCGAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCAGCGTTTAACGCGTTGAGATTAATCGTTACAGTAGGGTGGGCCATATAT RYVDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASEASAGSGNAAGQAAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATATGTTGATTGG------------------------TTGATTACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCGAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCA---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGGTGG---------GCCATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASEASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU079181 [IV-Alpha7-HOT2C01] NASB_37_env_samples_EU079181 gi|156106522|gb|EU079181| Uncultured organism clone NASB 37 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 37 putative proteorhodopsin gene, partial cds EU079181 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGTTACGTCGATTGGTTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTAGGGTGGGCAATTTAT RYVDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTACGTCGATTGG------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGGTGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU079220 [IV-Alpha7-HOT2C01] NASB_86_env_samples_EU079220 gi|156106599|gb|EU079220| Uncultured organism clone NASB 86 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 86 putative proteorhodopsin gene, partial cds EU079220 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGGTATGTAGACTGGTTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCCAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTAGGCTGGGCAATTTAC RYVDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYPGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTATGTAGACTGG------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCCAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGCTGG---------GCAATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYPGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU079210 [IV-Alpha7-HOT2C01] NASB_72_env_samples_EU079210 gi|156106580|gb|EU079210| Uncultured organism clone NASB 72 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 72 putative proteorhodopsin gene, partial cds EU079210 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGTTATGTTGACTGGTTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTAGGTTGGGCAATTTAC RYVDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTATGTTGACTGG------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ339385 [IV-Alpha7-HOT2C01] clone_S-S4OM-E9_DQ339385 gi|85681741|gb|DQ339385| Uncultured bacterium clone S-S4OM-E9 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-E9 predicted proteorhodopsin gene, partial cds. DQ339385 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTAGGGTGGGCCATATATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422341 [IV-Alpha7-HOT2C01] clone_med-20m-h6_DQ422341 gi|90024202|gb|DQ422341| Uncultured bacterium clone med-20m-h6 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-h6 putative proteorhodopsin gene, partial cds. DQ422341 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTACGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTAGGGTGGGCGATTTACCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTACGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGGTGG---------GCGATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ339341 [IV-Alpha7-HOT2C01] clone_S-S4OM-A7_DQ339341 gi|85681655|gb|DQ339341| Uncultured bacterium clone S-S4OM-A7 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-A7 predicted proteorhodopsin gene, partial cds. DQ339341 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATATATTGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTAGGTTGGGCCATCTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ203642 [IV-Alpha7-HOT2C01] medHO120G10_env_samples_DQ203642 gi|77547732|gb|DQ203642| Uncultured bacterium clone medHO120G10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120G10 predicted proteorhodopsin gene, partial cds DQ203642 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGTTGATCACTGTGCCTCTACAAATTGTAGAGCTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTAGGTTGGGCCATTTATCCA RYIDWLITVPLQIVELYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGCTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVELYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ203701 [IV-Alpha7-HOT2C01] medHO155D9_env_samples_DQ203701 gi|77547850|gb|DQ203701| Uncultured bacterium clone medHO155D9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155D9 predicted proteorhodopsin gene, partial cds DQ203701 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGATTGGTTGATCACTGTGCCTCCACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTAGGTTGGGCCATTTATCCA SYIDWLITVPPQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGATTGG------------------------TTGATCACTGTGCCTCCACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPPQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ203583 [IV-Alpha7-HOT2C01] medHO120A1_env_samples_DQ203583 gi|77547614|gb|DQ203583| Uncultured bacterium clone medHO120A1 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120A1 predicted proteorhodopsin gene, partial cds DQ203583 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGTTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTAGGTTGGGCAATTTACCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ203329 [IV-Alpha7-HOT2C01] SS114a80F11_env_samples_DQ203329 gi|77547106|gb|DQ203329| Uncultured bacterium clone SS114a80F11 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a80F11 predicted proteorhodopsin gene, partial cds DQ203329 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_80m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_2003 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGCTACATTGACTGGTTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTAGGTTGGGCGATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTACATTGACTGG------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCGATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU079222 [IV-Alpha7-HOT2C01] NASB_88_env_samples_EU079222 gi|156106603|gb|EU079222| Uncultured organism clone NASB 88 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 88 putative proteorhodopsin gene, partial cds EU079222 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGGTATATTGATTGGTTGATTACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTGGGAGAAGTCGGAGCGATGAATGTAACACTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCATTGAGATTGATCGTTACAGTAGGATGGGCCATTTAT RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTATATTGATTGG------------------------TTGATTACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTGGGAGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCATTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGATGG---------GCCATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU079257 [IV-Alpha7-HOT2C01] clone_B_Mtd1_006_EU079257 gi|156106673|gb|EU079257| Uncultured organism clone B Mtd1 006 putative proteorhodopsin gene, partial cds. Uncultured organism clone B Mtd1 006 putative proteorhodopsin gene, partial cds. EU079257 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; na light-energy conversion (ion transport) unknown [unclassified sequences/environmental samples] taxon:155900 genomic DNA other 27-FEB-2008 #na Sargasso Sea surface water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99-109 (2008) 18211270 #na GTAATCCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTGGGTGAAGTCGGAGCGATGAATGTAACACTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCCGGTCA VILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAATCCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTGGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCCGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG---------------------------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915907 [IV-Alpha7-HOT2C01] US120212_env_samples_EU915907 gi|229358696|gb|EU915907| Uncultured microorganism clone US120212 putative proteorhodopsin gene, partial cds Uncultured microorganism clone US120212 putative proteorhodopsin gene, partial cds EU915907 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_surface_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTTGCCGCTACTGTTTTCTTCTTTCTTGAAAGAGACAGAGTAGCAGCTAAATGGAAGACGTCCCTCACAGTAGCTGGTTTGGTTACTGGTGTTGCGGCGTGGCACTATTTCTACATGAGAGGCGTATGGGTCGCTACTGGTGACTCTCCAGCAGTCCTTCGATACATTGACTGGTTGATTACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTGGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCCGCGTTTAACGCATTGAGATTGATCGTTACAGTAGGATGGGCGATCTAC MLAATVFFFLERDRVAAKWKTSLTVAGLVTGVAAWHYFYMRGVWVATGDSPAVLRYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACTGTTTTCTTCTTTCTTGAAAGAGACAGAGTAGCAGCT---AAATGGAAGACGTCCCTCACAGTAGCTGGTTTGGTTACTGGTGTTGCGGCGTGGCACTATTTCTACATGAGAGGCGTATGGGTC------------------------------GCTACT---------------------GGTGACTCTCCAGCAGTCCTTCGATACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTGGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCC---GCG---TTT---AAC---GCATTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGATGG---------GCGATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFLERDRVAA-KWKTSLTVAGLVTGVAAWHYFYMRGVWV----------AT-------GDSPAVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926104 [IV-Alpha7-HOT2C01] BOUM_OTU017_env_samples gb|KJ926104| Uncultured bacterium clone BOUM OTU017 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU017 putative proteorhodopsin gene, partial cds KJ926104 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 33.709667 32.644667 #na #na #na #na #na ATTGATTGGTTGATCACTGTGCCTCTACAAATTGTAGAGTTCTACGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCATTGAGATTGATCGTTACAGTAGGGTGGGCGATTTAT IDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGATTGG------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTACGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCATTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGGTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU079204 [IV-Alpha7-HOT2C01] NASB_65_env_samples_EU079204 gi|156106568|gb|EU079204| Uncultured organism clone NASB 65 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 65 putative proteorhodopsin gene, partial cds EU079204 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGCTACATTGATTGGTTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTAGGATGGGCAATCTAC RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTACATTGATTGG------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGATGG---------GCAATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU079256 [IV-Alpha7-HOT2C01] clone_B_Mtd1_003_EU079256 gi|156106671|gb|EU079256| Uncultured organism clone B Mtd1 003 putative proteorhodopsin gene, partial cds. Uncultured organism clone B Mtd1 003 putative proteorhodopsin gene, partial cds. EU079256 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; na light-energy conversion (ion transport) unknown [unclassified sequences/environmental samples] taxon:155900 genomic DNA other 27-FEB-2008 #na Sargasso Sea surface water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99-109 (2008) 18211270 #na GTAATTCTTGCGGCGATGCCTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCCGGTCA VILAAMPAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAATTCTTGCGGCG---------ATG---CCTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCCGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VILAA---M-PAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG---------------------------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU079262 [IV-Alpha7-HOT2C01] clone_B_Mtd1_009_EU079262 gi|156106683|gb|EU079262| Uncultured organism clone B Mtd1 009 putative proteorhodopsin gene, partial cds. Uncultured organism clone B Mtd1 009 putative proteorhodopsin gene, partial cds. EU079262 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; na light-energy conversion (ion transport) unknown [unclassified sequences/environmental samples] taxon:155900 genomic DNA other 27-FEB-2008 #na Sargasso Sea surface water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99-109 (2008) 18211270 #na GTAATTCTTGCGGCGATGCCTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCCGGTCA VILAAMPAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAATTCTTGCGGCG---------ATG---CCTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCCGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VILAA---M-PAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG---------------------------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU079255 [IV-Alpha7-HOT2C01] clone_B_Mtd1_007_EU079255 gi|156106669|gb|EU079255| Uncultured organism clone B Mtd1 007 putative proteorhodopsin gene, partial cds. Uncultured organism clone B Mtd1 007 putative proteorhodopsin gene, partial cds. EU079255 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; na light-energy conversion (ion transport) unknown [unclassified sequences/environmental samples] taxon:155900 genomic DNA other 27-FEB-2008 #na Sargasso Sea surface water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99-109 (2008) 18211270 #na GTAATTCTTGCAGCGATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCCGGTCA VILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCCGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG---------------------------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU079258 [IV-Alpha7-HOT2C01] clone_B_Mtd1_012_EU079258 gi|156106675|gb|EU079258| Uncultured organism clone B Mtd1 012 putative proteorhodopsin gene, partial cds. Uncultured organism clone B Mtd1 012 putative proteorhodopsin gene, partial cds. EU079258 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; na light-energy conversion (ion transport) unknown [unclassified sequences/environmental samples] taxon:155900 genomic DNA other 27-FEB-2008 #na Sargasso Sea surface water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99-109 (2008) 18211270 #na GTAATTCTTGCGGCGATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCA VILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAATTCTTGCGGCG---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG---------------------------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU079252 [IV-Alpha7-HOT2C01] clone_B_Mtd1_005_EU079252 gi|156106663|gb|EU079252| Uncultured organism clone B Mtd1 005 putative proteorhodopsin gene, partial cds. Uncultured organism clone B Mtd1 005 putative proteorhodopsin gene, partial cds. EU079252 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; na light-energy conversion (ion transport) unknown [unclassified sequences/environmental samples] taxon:155900 genomic DNA other 27-FEB-2008 #na Sargasso Sea surface water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99-109 (2008) 18211270 #na GTAATTCTTGCAGCTATGACTGCTGTTGCTTCAGGCTTATTCTGGAGATTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCTAGTGCTGGTAGTGGAAATGCTGCCGGTCA VILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAATTCTTGCAGCT---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---TTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCTAGTGCTGGT------AGT---GGAAATGCTGCCGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG---------------------------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422299 [IV-Alpha7-HOT2C01] clone_med-20m-e11_DQ422299 gi|90024118|gb|DQ422299| Uncultured bacterium clone med-20m-e11 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-e11 putative proteorhodopsin gene, partial cds. DQ422299 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACACTAGCCTTCGTTATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTAGCC---TTCGTTATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422709 [IV-Alpha7-HOT2C01] clone_med-tb04-20m-g3_DQ422709 gi|90024938|gb|DQ422709| Uncultured bacterium clone med-tb04-20m-g3 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-g3 putative proteorhodopsin gene, partial cds. DQ422709 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATATATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTAAAGTTGGAGCGATGAATGTAACACTAGCCTTCGTTATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGKVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTAAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTAGCC---TTCGTTATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGK---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422572 [IV-Alpha7-HOT2C01] clone_med-tb04-0m-c5_DQ422572 gi|90024664|gb|DQ422572| Uncultured bacterium clone med-tb04-0m-c5 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-c5 putative proteorhodopsin gene, partial cds. DQ422572 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACACTAGCCTTCGTTATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTAGCC---TTCGTTATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422369 [IV-Alpha7-HOT2C01] clone_med-50m-b2_DQ422369 gi|90024258|gb|DQ422369| Uncultured bacterium clone med-50m-b2 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-b2 putative proteorhodopsin gene, partial cds. DQ422369 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACACTAGCCTTCGTTATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTAGCC---TTCGTTATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ203576 [IV-Alpha7-HOT2C01] MedHO1202H4_env_samples_DQ203576 gi|77547600|gb|DQ203576| Uncultured bacterium clone MedHO1202H4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202H4 predicted proteorhodopsin gene, partial cds DQ203576 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGTTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTTTTAATCGCATCAATAGTGATGTTGGTTGGCGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACACTAGCCTTCGTTATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGGTGGGCAATTTACCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTTTTAATCGCATCAATAGTGATGTTGGTTGGCGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTAGCC---TTCGTTATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGGTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU079219 [IV-Alpha7-HOT2C01] NASB_85_env_samples_EU079219 gi|156106597|gb|EU079219| Uncultured organism clone NASB 85 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 85 putative proteorhodopsin gene, partial cds EU079219 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGCTATATTGACTGGTTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGATTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACACTAGCCTTCGTTATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTCAACGCGTTGAGATTAATCGTTACAGTAGGATGGGCAATTTAC RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTATATTGACTGG------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---TTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTAGCC---TTCGTTATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTC---AAC---GCGTTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGATGG---------GCAATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ339159 [IV-Alpha7-HOT2C01] clone_S-SOM-A11_DQ339159 gi|85681295|gb|DQ339159| Uncultured bacterium clone S-SOM-A11 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-A11 predicted proteorhodopsin gene, partial cds. DQ339159 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTTTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCGGGCTTATTCTGGAGATTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACACTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCTTTGAGATTAATCGTTACAGTAGGGTGGGCCATCTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTTTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCG---GGCTTA------------------------------------TTCTGGAGA---TTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCTTTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ339160 [IV-Alpha7-HOT2C01] clone_S-SOM-A12_DQ339160 gi|85681297|gb|DQ339160| Uncultured bacterium clone S-SOM-A12 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-A12 predicted proteorhodopsin gene, partial cds. DQ339160 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTTTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCGGGCTTATTCTGGAGATTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACACTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCTTTGAGATTAATCGTTACAGTAGGGTGGGCCATCTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTTTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCG---GGCTTA------------------------------------TTCTGGAGA---TTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCTTTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ339167 [IV-Alpha7-HOT2C01] clone_S-SOM-A8_DQ339167 gi|85681311|gb|DQ339167| Uncultured bacterium clone S-SOM-A8 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-A8 predicted proteorhodopsin gene, partial cds. DQ339167 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTTTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCGGGCTTATTCTGGAGATTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACACTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCTTTGAGATTAATCGTTACAGTAGGGTGGGCCATCTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTTTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCG---GGCTTA------------------------------------TTCTGGAGA---TTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCTTTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422196 [IV-Alpha7-HOT2C01] clone_med-0m-d9_DQ422196 gi|90023912|gb|DQ422196| Uncultured bacterium clone med-0m-d9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-d9 putative proteorhodopsin gene, partial cds. DQ422196 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATCACGGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGTTTATTCTGGAGACTGTTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACTTTAGCGTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACGGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGTTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTTTAGCG---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422541 [IV-Alpha7-HOT2C01] clone_med-tb04-0m-a1_DQ422541 gi|90024602|gb|DQ422541| Uncultured bacterium clone med-tb04-0m-a1 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-a1 putative proteorhodopsin gene, partial cds. DQ422541 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACAGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGTTTATTCTGGAGACTGTTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTAGGTTGGGCGATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACAGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGTTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCGATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ339338 [IV-Alpha7-HOT2C01] clone_S-S4OM-A3_DQ339338 gi|85681649|gb|DQ339338| Uncultured bacterium clone S-S4OM-A3 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-A3 predicted proteorhodopsin gene, partial cds. DQ339338 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATCACAGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGTTTATTCTGGAGACTGTTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACTCTAGCGTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTAGGGTGGGCCATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACAGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGTTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCG---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422645 [IV-Alpha7-HOT2C01] clone_med-tb04-20m-b10_DQ422645 gi|90024810|gb|DQ422645| Uncultured bacterium clone med-tb04-20m-b10 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-b10 putative proteorhodopsin gene, partial cds. DQ422645 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACAGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGTTTATTCTGGAGACTGTTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACTCTAGCGTTCGTAATAGGAATGGCTGGATGGCTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACAGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGTTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCG---TTCGTAATAGGAATGGCTGGATGGCTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU079197 [IV-Alpha7-HOT2C01] NASB_51_env_samples_EU079197 gi|156106554|gb|EU079197| Uncultured organism clone NASB 51 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 51 putative proteorhodopsin gene, partial cds EU079197 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGATACGTTGATTGGTTGATCACAGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACTCTAGCGTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGAAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTAGGATGGGCGATTTAC RYVDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACGTTGATTGG------------------------TTGATCACAGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCG---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGA------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGATGG---------GCGATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422411 [IV-Alpha7-HOT2C01] clone_med-50m-e8_DQ422411 gi|90024342|gb|DQ422411| Uncultured bacterium clone med-50m-e8 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-e8 putative proteorhodopsin gene, partial cds. DQ422411 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTGATCACAGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACTCTAGCGTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTAGGTTGGGCTATTTACCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTGATCACAGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCG---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422177 [IV-Alpha7-HOT2C01] clone_med-0m-c2_DQ422177 gi|90023874|gb|DQ422177| Uncultured bacterium clone med-0m-c2 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-c2 putative proteorhodopsin gene, partial cds. DQ422177 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACTCTAGCCTTCGTCATAGGAATGGCAGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGTAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTAGGTTGGGCTATATATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTCATAGGAATGGCAGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGTAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422156 [IV-Alpha7-HOT2C01] clone_med-0m-a4_DQ422156 gi|90023832|gb|DQ422156| Uncultured bacterium clone med-0m-a4 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-a4 putative proteorhodopsin gene, partial cds. DQ422156 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATTACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTGTTCTGGAGACTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTACGAAATTTTTGCAGGAGAAGCAAGTAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTAGGTTGGGCTATATATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATTACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTACGAAATT---------------TTT------GCA---GGAGAAGCAAGTAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422676 [IV-Alpha7-HOT2C01] clone_med-tb04-20m-d6_DQ422676 gi|90024872|gb|DQ422676| Uncultured bacterium clone med-tb04-20m-d6 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-d6 putative proteorhodopsin gene, partial cds. DQ422676 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na CGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCATTGAGACTGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCATTG---AGACTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ203717 [IV-Alpha7-HOT2C01] medHO155F8_env_samples_DQ203717 gi|77547882|gb|DQ203717| Uncultured bacterium clone medHO155F8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155F8 predicted proteorhodopsin gene, partial cds DQ203717 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGTTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATACTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCATTGAGACTGATCGTTACAGTAGGTTGGGCGATATACCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLYWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TACTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCATTG---AGACTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCGATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------YWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422285 [IV-Alpha7-HOT2C01] clone_med-20m-c9_DQ422285 gi|90024090|gb|DQ422285| Uncultured bacterium clone med-20m-c9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-c9 putative proteorhodopsin gene, partial cds. DQ422285 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAACTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTGTTCTGGAGACTGTTAATCGCATCAATCGTGATGTTGGTTGGTGGTTATCTGGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTACGAAATTTTTGCAGGAGAAGCAAGCAAGGCGAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQTVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAACTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATCGCATCAATCGTGATGTTGGTTGGTGGTTATCTGGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTACGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCGAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQTVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422609 [IV-Alpha7-HOT2C01] clone_med-tb04-0m-f8_DQ422609 gi|90024738|gb|DQ422609| Uncultured bacterium clone med-tb04-0m-f8 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-f8 putative proteorhodopsin gene, partial cds. DQ422609 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTGTTCTGGAGACTGTTAATCGCATCAATCGTGATGTTGGTTGGTGGTTATCTGGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTACGAAATTTTTGCAGGAGAAGCAAGCAAGGCGAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATCGCATCAATCGTGATGTTGGTTGGTGGTTATCTGGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTACGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCGAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_1105128202136 [IV-Alpha7-HOT2C01] JCVI_ORF_1105128202136 jcvi|1105128202136| 1105128202136 JCVI ORF 1105128202136 1105128202136 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.22_0.8 other #na 26-FEB-2003 Open_Ocean/5m_depth/S_36.6_psu/GS000d/Sargasso_Station_13/Sargasso_Sea Sargasso Sea marine 31.175 -64.32433 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATTAAGGGGAATATAATAATGAAAGTATTAATGCTAAATCCCGGAGATCACGTAGCCATATCATTTTGGTTAATCTCTATGGCCATGGTTGCAGCTACAGCTTTCTTCTTTCTTGAAAGAGACAGAGTAGCAGCTAAGTGGAAGACGTCCCTCACAGTAGCTGGTTTGGTTACAGGTGTTGCGGCGTGGCACTATTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGATACATTGACTGGTTGATTACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGATTATTAATCGCATCAATAGTGATGTTGGTTGGTGGCTATCTAGGTGAAGTTGGGGCGATGAATGTAGTGCTAGCCTTCGTAATTGGAATGGCTGGATGGCTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGTAAAGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCTTTGAGATTGATCGTTACAGTAGGTTGGGCGATTTATCCAATAGGTTATGCAGTAGGTTACTTTGGTGGCGGCGTAGATGCTGGTTCACTGAACTTAATCTATAACCTGCTGACTTTCCACCCC IKGNIIMKVLMLNPGDHVAISFWLISMAMVAATAFFFLERDRVAAKWKTSLTVAGLVTGVAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVVLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYPIGYAVGYFGGGVDAGSLNLIYNLLTFHP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAAGGGGAATATAATAATGAAAGTATTAATGCTAAATCCCGGAGATCACGTAGCCATATCATTTTGGTTAATCTCTATGGCCATGGTTGCAGCTACAGCTTTCTTCTTTCTTGAAAGAGACAGAGTAGCAGCT---AAGTGGAAGACGTCCCTCACAGTAGCTGGTTTGGTTACAGGTGTTGCGGCGTGGCACTATTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGATACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---TTATTAATCGCATCAATAGTGATGTTGGTTGGTGGCTATCTAGGTGAA---------GTT------------------GGG------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------GTGCTAGCC---TTCGTAATTGGAATGGCTGGATGGCTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGTAAAGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCTTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCGATTTATCCAATAGGTTATGCAGTAGGTTACTTTGGT---GGCGGC---------------------------GTAGATGCT---------GGTTCACTGAACTTAATCTATAACCTGCTGACTTTCCACCCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------IKGNIIMKVLMLNPGDHVAISFWLISMAMVAATAFFFLERDRVAA-KWKTSLTVAGLVTGVAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------VLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYPIGYAVGYFG-GG---------VDA---GSLNLIYNLLTFHP--------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422325 [IV-Alpha7-HOT2C01] clone_med-20m-g2_DQ422325 gi|90024170|gb|DQ422325| Uncultured bacterium clone med-20m-g2 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-g2 putative proteorhodopsin gene, partial cds. DQ422325 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACACTAGCCTTCGTTATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTAGCC---TTCGTTATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422546 [IV-Alpha7-HOT2C01] clone_med-tb04-0m-a3_DQ422546 gi|90024612|gb|DQ422546| Uncultured bacterium clone med-tb04-0m-a3 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-a3 putative proteorhodopsin gene, partial cds. DQ422546 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422714 [IV-Alpha7-HOT2C01] clone_med-tb04-20m-g8_DQ422714 gi|90024948|gb|DQ422714| Uncultured bacterium clone med-tb04-20m-g8 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-g8 putative proteorhodopsin gene, partial cds. DQ422714 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422724 [IV-Alpha7-HOT2C01] clone_med-tb04-20m-h7_DQ422724 gi|90024968|gb|DQ422724| Uncultured bacterium clone med-tb04-20m-h7 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-h7 putative proteorhodopsin gene, partial cds. DQ422724 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ339362 [IV-Alpha7-HOT2C01] clone_S-S4OM-C6_DQ339362 gi|85681695|gb|DQ339362| Uncultured bacterium clone S-S4OM-C6 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-C6 predicted proteorhodopsin gene, partial cds. DQ339362 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGGTGGGCAATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGGTGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ339387 [IV-Alpha7-HOT2C01] clone_S-S4OM-F10_DQ339387 gi|85681745|gb|DQ339387| Uncultured bacterium clone S-S4OM-F10 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-F10 predicted proteorhodopsin gene, partial cds. DQ339387 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGGTGGGCAATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGGTGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422339 [IV-Alpha7-HOT2C01] clone_med-20m-h4_DQ422339 gi|90024198|gb|DQ422339| Uncultured bacterium clone med-20m-h4 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-h4 putative proteorhodopsin gene, partial cds. DQ422339 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGGTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGGTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422695 [IV-Alpha7-HOT2C01] clone_med-tb04-20m-f12_DQ422695 gi|90024910|gb|DQ422695| Uncultured bacterium clone med-tb04-20m-f12 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-f12 putative proteorhodopsin gene, partial cds. DQ422695 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422605 [IV-Alpha7-HOT2C01] clone_med-tb04-0m-f4_DQ422605 gi|90024730|gb|DQ422605| Uncultured bacterium clone med-tb04-0m-f4 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-f4 putative proteorhodopsin gene, partial cds. DQ422605 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGATTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGATTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422608 [IV-Alpha7-HOT2C01] clone_med-tb04-0m-f7_DQ422608 gi|90024736|gb|DQ422608| Uncultured bacterium clone med-tb04-0m-f7 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-f7 putative proteorhodopsin gene, partial cds. DQ422608 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATCGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATCGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422679 [IV-Alpha7-HOT2C01] clone_med-tb04-20m-d9_DQ422679 gi|90024878|gb|DQ422679| Uncultured bacterium clone med-tb04-20m-d9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-d9 putative proteorhodopsin gene, partial cds. DQ422679 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422385 [IV-Alpha7-HOT2C01] clone_med-50m-c6_DQ422385 gi|90024290|gb|DQ422385| Uncultured bacterium clone med-50m-c6 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-c6 putative proteorhodopsin gene, partial cds. DQ422385 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATATATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422692 [IV-Alpha7-HOT2C01] clone_med-tb04-20m-f1_DQ422692 gi|90024904|gb|DQ422692| Uncultured bacterium clone med-tb04-20m-f1 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-f1 putative proteorhodopsin gene, partial cds. DQ422692 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATATATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422243 [IV-Alpha7-HOT2C01] clone_20-2_DQ422243 gi|90024006|gb|DQ422243| Uncultured bacterium clone 20-2 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 20-2 putative proteorhodopsin gene, partial cds. DQ422243 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCCATTTACCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422697 [IV-Alpha7-HOT2C01] clone_med-tb04-20m-f3_DQ422697 gi|90024914|gb|DQ422697| Uncultured bacterium clone med-tb04-20m-f3 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-f3 putative proteorhodopsin gene, partial cds. DQ422697 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCAATTTACCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ339401 [IV-Alpha7-HOT2C01] clone_S-S4OM-G4_DQ339401 gi|85681773|gb|DQ339401| Uncultured bacterium clone S-S4OM-G4 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-G4 predicted proteorhodopsin gene, partial cds. DQ339401 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTTATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCCATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTTATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422693 [IV-Alpha7-HOT2C01] clone_med-tb04-20m-f10_DQ422693 gi|90024906|gb|DQ422693| Uncultured bacterium clone med-tb04-20m-f10 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-f10 putative proteorhodopsin gene, partial cds. DQ422693 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCGATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCGATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422529 [IV-Alpha7-HOT2C01] clone_med-tb04-50m-g9_DQ422529 gi|90024578|gb|DQ422529| Uncultured bacterium clone med-tb04-50m-g9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-g9 putative proteorhodopsin gene, partial cds. DQ422529 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCGATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCGATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422681 [IV-Alpha7-HOT2C01] clone_med-tb04-20m-e10_DQ422681 gi|90024882|gb|DQ422681| Uncultured bacterium clone med-tb04-20m-e10 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-e10 putative proteorhodopsin gene, partial cds. DQ422681 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422675 [IV-Alpha7-HOT2C01] clone_med-tb04-20m-d5_DQ422675 gi|90024870|gb|DQ422675| Uncultured bacterium clone med-tb04-20m-d5 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-d5 putative proteorhodopsin gene, partial cds. DQ422675 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422700 [IV-Alpha7-HOT2C01] clone_med-tb04-20m-f6_DQ422700 gi|90024920|gb|DQ422700| Uncultured bacterium clone med-tb04-20m-f6 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-f6 putative proteorhodopsin gene, partial cds. DQ422700 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ339339 [IV-Alpha7-HOT2C01] clone_S-S4OM-A4_DQ339339 gi|85681651|gb|DQ339339| Uncultured bacterium clone S-S4OM-A4 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-A4 predicted proteorhodopsin gene, partial cds. DQ339339 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTTATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGGTGGGCCATATATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTTATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ339417 [IV-Alpha7-HOT2C01] clone_S-S4OM-H9_DQ339417 gi|85681805|gb|DQ339417| Uncultured bacterium clone S-S4OM-H9 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-H9 predicted proteorhodopsin gene, partial cds. DQ339417 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTTATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGGTGGGCCATATATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTTATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ203330 [IV-Alpha7-HOT2C01] SS114a80F5_env_samples_DQ203330 gi|77547108|gb|DQ203330| Uncultured bacterium clone SS114a80F5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a80F5 predicted proteorhodopsin gene, partial cds DQ203330 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_80m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_2003 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATAGACTGGCTTATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGGTGGGCAATCTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTTATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGGTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ339368 [IV-Alpha7-HOT2C01] clone_S-S4OM-D11_DQ339368 gi|85681707|gb|DQ339368| Uncultured bacterium clone S-S4OM-D11 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-D11 predicted proteorhodopsin gene, partial cds. DQ339368 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTTATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCAATCTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTTATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ203324 [IV-Alpha7-HOT2C01] SS114a80E2_env_samples_DQ203324 gi|77547096|gb|DQ203324| Uncultured bacterium clone SS114a80E2 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a80E2 predicted proteorhodopsin gene, partial cds DQ203324 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_80m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_2003 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTTATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCCATCTACCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTTATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ339378 [IV-Alpha7-HOT2C01] clone_S-S4OM-E11_DQ339378 gi|85681727|gb|DQ339378| Uncultured bacterium clone S-S4OM-E11 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-E11 predicted proteorhodopsin gene, partial cds. DQ339378 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTTATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGGTGGGCCATTTACCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTTATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGGTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ203710 [IV-Alpha7-HOT2C01] medHO155F10_env_samples_DQ203710 gi|77547868|gb|DQ203710| Uncultured bacterium clone medHO155F10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155F10 predicted proteorhodopsin gene, partial cds DQ203710 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCAATCTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ203806 [IV-Alpha7-HOT2C01] SS114a40B3_env_samples_DQ203806 gi|77548060|gb|DQ203806| Uncultured bacterium clone SS114a40B3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40B3 predicted proteorhodopsin gene, partial cds DQ203806 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGGTATATTGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTCAACGCGTTGAGATTAATCGGTACAGTAGGTTGGGCGATATATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIGTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTATATTGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTC---AAC---GCGTTG---AGATTAATCGGTACAGTA---------------------------------------------------------------GGTTGG---------GCGATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIGTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ203622 [IV-Alpha7-HOT2C01] medHO120E1_env_samples_DQ203622 gi|77547692|gb|DQ203622| Uncultured bacterium clone medHO120E1 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120E1 predicted proteorhodopsin gene, partial cds DQ203622 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATATATTGATTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTGATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGCAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGGTGGGCCATCTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFAIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATATATTGATTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTGATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGCAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FAIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ339383 [IV-Alpha7-HOT2C01] clone_S-S4OM-E7_DQ339383 gi|85681737|gb|DQ339383| Uncultured bacterium clone S-S4OM-E7 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-E7 predicted proteorhodopsin gene, partial cds. DQ339383 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGGTGGGCCATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ339412 [IV-Alpha7-HOT2C01] clone_S-S4OM-H4_DQ339412 gi|85681795|gb|DQ339412| Uncultured bacterium clone S-S4OM-H4 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-H4 predicted proteorhodopsin gene, partial cds. DQ339412 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGGTGGGCCATCTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ339406 [IV-Alpha7-HOT2C01] clone_S-S4OM-G9_DQ339406 gi|85681783|gb|DQ339406| Uncultured bacterium clone S-S4OM-G9 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-G9 predicted proteorhodopsin gene, partial cds. DQ339406 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGGTGGGCCATCTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ339396 [IV-Alpha7-HOT2C01] clone_S-S4OM-G1_DQ339396 gi|85681763|gb|DQ339396| Uncultured bacterium clone S-S4OM-G1 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-G1 predicted proteorhodopsin gene, partial cds. DQ339396 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGGTGGGCAATCTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGGTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ339214 [IV-Alpha7-HOT2C01] clone_S-SOM-E8_DQ339214 gi|85681405|gb|DQ339214| Uncultured bacterium clone S-SOM-E8 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-E8 predicted proteorhodopsin gene, partial cds. DQ339214 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCAATCTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422434 [IV-Alpha7-HOT2C01] clone_med-50m-g8_DQ422434 gi|90024388|gb|DQ422434| Uncultured bacterium clone med-50m-g8 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-g8 putative proteorhodopsin gene, partial cds. DQ422434 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422512 [IV-Alpha7-HOT2C01] clone_med-tb04-50m-f4_DQ422512 gi|90024544|gb|DQ422512| Uncultured bacterium clone med-tb04-50m-f4 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-f4 putative proteorhodopsin gene, partial cds. DQ422512 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATTGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422502 [IV-Alpha7-HOT2C01] clone_med-tb04-50m-e6_DQ422502 gi|90024524|gb|DQ422502| Uncultured bacterium clone med-tb04-50m-e6 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-e6 putative proteorhodopsin gene, partial cds. DQ422502 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATTGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCTATTTACCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422526 [IV-Alpha7-HOT2C01] clone_med-tb04-50m-g6_DQ422526 gi|90024572|gb|DQ422526| Uncultured bacterium clone med-tb04-50m-g6 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-g6 putative proteorhodopsin gene, partial cds. DQ422526 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATTGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCTATTTACCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422210 [IV-Alpha7-HOT2C01] clone_med-0m-f11_DQ422210 gi|90023940|gb|DQ422210| Uncultured bacterium clone med-0m-f11 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-f11 putative proteorhodopsin gene, partial cds. DQ422210 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTTGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCGATTTACCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTTGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCGATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422525 [IV-Alpha7-HOT2C01] clone_med-tb04-50m-g5_DQ422525 gi|90024570|gb|DQ422525| Uncultured bacterium clone med-tb04-50m-g5 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-g5 putative proteorhodopsin gene, partial cds. DQ422525 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATTGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCTATTTACCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422270 [IV-Alpha7-HOT2C01] clone_med-20m-b6_DQ422270 gi|90024060|gb|DQ422270| Uncultured bacterium clone med-20m-b6 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-b6 putative proteorhodopsin gene, partial cds. DQ422270 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCTATTTACCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422656 [IV-Alpha7-HOT2C01] clone_med-tb04-20m-c1_DQ422656 gi|90024832|gb|DQ422656| Uncultured bacterium clone med-tb04-20m-c1 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-c1 putative proteorhodopsin gene, partial cds. DQ422656 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGCGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCTATTTACCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGCGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422262 [IV-Alpha7-HOT2C01] clone_med-20m-b1_DQ422262 gi|90024044|gb|DQ422262| Uncultured bacterium clone med-20m-b1 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-b1 putative proteorhodopsin gene, partial cds. DQ422262 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCTATATATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422564 [IV-Alpha7-HOT2C01] clone_med-tb04-0m-b9_DQ422564 gi|90024648|gb|DQ422564| Uncultured bacterium clone med-tb04-0m-b9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-b9 putative proteorhodopsin gene, partial cds. DQ422564 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCTATATATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422390 [IV-Alpha7-HOT2C01] clone_med-50m-d10_DQ422390 gi|90024300|gb|DQ422390| Uncultured bacterium clone med-50m-d10 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-d10 putative proteorhodopsin gene, partial cds. DQ422390 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCTATATATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422717 [IV-Alpha7-HOT2C01] clone_med-tb04-20m-h10_DQ422717 gi|90024954|gb|DQ422717| Uncultured bacterium clone med-tb04-20m-h10 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-h10 putative proteorhodopsin gene, partial cds. DQ422717 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATTGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCGAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCATTGAGATTGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCGAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCATTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422314 [IV-Alpha7-HOT2C01] clone_med-20m-f3_DQ422314 gi|90024148|gb|DQ422314| Uncultured bacterium clone med-20m-f3 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-f3 putative proteorhodopsin gene, partial cds. DQ422314 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422359 [IV-Alpha7-HOT2C01] clone_med-50m-a4_DQ422359 gi|90024238|gb|DQ422359| Uncultured bacterium clone med-50m-a4 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-a4 putative proteorhodopsin gene, partial cds. DQ422359 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422439 [IV-Alpha7-HOT2C01] clone_med-50m-h12_DQ422439 gi|90024398|gb|DQ422439| Uncultured bacterium clone med-50m-h12 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-h12 putative proteorhodopsin gene, partial cds. DQ422439 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422417 [IV-Alpha7-HOT2C01] clone_med-50m-f3_DQ422417 gi|90024354|gb|DQ422417| Uncultured bacterium clone med-50m-f3 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-f3 putative proteorhodopsin gene, partial cds. DQ422417 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTAATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCCATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422461 [IV-Alpha7-HOT2C01] clone_med-tb04-50m-b12_DQ422461 gi|90024442|gb|DQ422461| Uncultured bacterium clone med-tb04-50m-b12 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-b12 putative proteorhodopsin gene, partial cds. DQ422461 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATTGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422322 [IV-Alpha7-HOT2C01] clone_med-20m-g10_DQ422322 gi|90024164|gb|DQ422322| Uncultured bacterium clone med-20m-g10 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-g10 putative proteorhodopsin gene, partial cds. DQ422322 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATATATTGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ339274 [IV-Alpha7-HOT2C01] clone_S-S80M-C2_DQ339274 gi|85681523|gb|DQ339274| Uncultured bacterium clone S-S80M-C2 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-C2 predicted proteorhodopsin gene, partial cds. DQ339274 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTAATCGCATCTATAGTGATGCTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTCAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCCATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCTATAGTGATGCTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTC---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ339270 [IV-Alpha7-HOT2C01] clone_S-S80M-C1_DQ339270 gi|85681515|gb|DQ339270| Uncultured bacterium clone S-S80M-C1 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-C1 predicted proteorhodopsin gene, partial cds. DQ339270 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTAATCGCATCTATAGTGATGCTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTCAACGCGTTGAGATTGATCGTTACAGTAGGGTGGGCCATCTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCTATAGTGATGCTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTC---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422600 [IV-Alpha7-HOT2C01] clone_med-tb04-0m-f10_DQ422600 gi|90024720|gb|DQ422600| Uncultured bacterium clone med-tb04-0m-f10 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-f10 putative proteorhodopsin gene, partial cds. DQ422600 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCAGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTTGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTCAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCAGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTTGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTC---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ203706 [IV-Alpha7-HOT2C01] medHO155E5_env_samples_DQ203706 gi|77547860|gb|DQ203706| Uncultured bacterium clone medHO155E5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155E5 predicted proteorhodopsin gene, partial cds DQ203706 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCAGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTTGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTCAACGCGTTGAGATTGATCGTTACAGTAGGGTGGGCTATCTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCAGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTTGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTC---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGGTGG---------GCTATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422484 [IV-Alpha7-HOT2C01] clone_med-tb04-50m-d11_DQ422484 gi|90024488|gb|DQ422484| Uncultured bacterium clone med-tb04-50m-d11 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-d11 putative proteorhodopsin gene, partial cds. DQ422484 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCAGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTTGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTCAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCAGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTTGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTC---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422690 [IV-Alpha7-HOT2C01] clone_med-tb04-20m-e8_DQ422690 gi|90024900|gb|DQ422690| Uncultured bacterium clone med-tb04-20m-e8 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-e8 putative proteorhodopsin gene, partial cds. DQ422690 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAACGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGTGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATTTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTCAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAATTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ACG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGT------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATTTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTC---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---T-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU079208 [IV-Alpha7-HOT2C01] NASB_70_env_samples_EU079208 gi|156106576|gb|EU079208| Uncultured organism clone NASB 70 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 70 putative proteorhodopsin gene, partial cds EU079208 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGGTATGTTGATTGGTTGATCACAGTGCCTCTACAAATTGTAGAGTTCTACGTAATTCTTGCGGCAATGACTGCTGTTGCTTCTGGTTTATCCTGGAGACTATTAATCGCATCAATAGTGATGTTAGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAATGCTGCCGGTCAAACTGCGTTTAACGCGTTGAGATTGATCGTTACAGTAGGTTGGGCTATATAT RYVDWLITVPLQIVEFYVILAAMTAVASGLSWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTATGTTGATTGG------------------------TTGATCACAGTGCCTCTACAAATTGTAGAGTTCTACGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCT---GGTTTA------------------------------------TCCTGGAGA---CTATTAATCGCATCAATAGTGATGTTAGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAATGCTGCCGGT---CAA---ACT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------SWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ422215 [IV-Alpha7-HOT2C01] clone_med-0m-f5_DQ422215 gi|90023950|gb|DQ422215| Uncultured bacterium clone med-0m-f5 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-f5 putative proteorhodopsin gene, partial cds. DQ422215 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATCACTGTGCCACTACAAATTGTAGAATTCTATGTAATTCTTGCAGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGATTACTAATCGCATCAATTGTGATGTTAGTTGGTGGATATCTAGGTGAAGTCGGAGCAATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGTGAAGCAAGTAAAGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCATTTAACGCCTTGAGATTAATCGTTACCGTTGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCACTACAAATTGTAGAATTCTATGTAATTCTTGCAGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---TTACTAATCGCATCAATTGTGATGTTAGTTGGTGGATATCTAGGTGAA---------GTC------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGTGAAGCAAGTAAAGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCA---TTT---AAC---GCCTTG---AGATTAATCGTTACCGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915751 [IV-Alpha7-HOT2C01] PF75080_env_samples_EU915751 gi|229358384|gb|EU915751| Uncultured microorganism clone PF75080 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF75080 putative proteorhodopsin gene, partial cds EU915751 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGCTTTCTTCTTTCTAGAGAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTCACTGTAGCTGGTTTGGTTACTGGTGTAGCGGCGTGGCACTATTTCTACATGAGAGGCGTATGGGTCGCTACTGGTGACTCGCCTACAGTACTTCGATACATTGACTGGTTGATCATTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCAATGACTGCTGTTGCTTCAGGCTTGTTCTGGAGATTGCTAATTGCATCAATTGTGATGTTAGTTGGCGGTTATCTGGGTGAAGTCGGAGCAATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTACGAAATTTTTGCAGGTGAAGCAAGTAAAGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAACTGCGTTTAACGCCTTGAGATTAATTGTTACAGTTGGTTGGGCGATTTAT MVAATAFFFLERDRVAAKWKTSLTVAGLVTGVAAWHYFYMRGVWVATGDSPTVLRYIDWLIIVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCTTTCTTCTTTCTAGAGAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTCACTGTAGCTGGTTTGGTTACTGGTGTAGCGGCGTGGCACTATTTCTACATGAGAGGCGTATGGGTC------------------------------GCTACT---------------------GGTGACTCGCCTACAGTACTTCGATACATTGACTGG------------------------TTGATCATTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTG------------------------------------TTCTGGAGA---TTGCTAATTGCATCAATTGTGATGTTAGTTGGCGGTTATCTGGGTGAA---------GTC------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTACGAAATT---------------TTT------GCA---GGTGAAGCAAGTAAAGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---ACT---GCG---TTT---AAC---GCCTTG---AGATTAATTGTTACAGTT---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLERDRVAA-KWKTSLTVAGLVTGVAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LIIVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ339249 [IV-Alpha7-HOT2C01] clone_S-SOM-H9_DQ339249 gi|85681473|gb|DQ339249| Uncultured bacterium clone S-SOM-H9 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-H9 predicted proteorhodopsin gene, partial cds. DQ339249 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATCACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCAATGACTGCTGTTGCTTCAGGCTTGTTCTGGAGATTGCTAATTGCATCAATTGTGATGTTAGTTGGCGGTTATCTAGGTGAAGTCGGAGCAATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTACGAAATTTTTGCAGGTGAAGCAAGTAAAGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAACTGCATTTAACGCCTTGAGATTAATTGTTACAGTTGGGTGGGCCATCTACCCA RYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTG------------------------------------TTCTGGAGA---TTGCTAATTGCATCAATTGTGATGTTAGTTGGCGGTTATCTAGGTGAA---------GTC------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTACGAAATT---------------TTT------GCA---GGTGAAGCAAGTAAAGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---ACT---GCA---TTT---AAC---GCCTTG---AGATTAATTGTTACAGTT---------------------------------------------------------------GGGTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_1105107625098 [IV-Alpha7-HOT2C01] JCVI_ORF_1105107625098 jcvi|1105107625098| 1105107625098 JCVI ORF 1105107625098 1105107625098 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 21-AUG-2003 Coastal/1m_depth/S_29.2_psu/GS002/Gulf_of_Maine/North_American_East_Coast Atlantic Ocean marine 42.503056 -67.24 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATTAAGGGGAGAATCATAAATATGATTTCTAAAATAAAAACTACAGTGATTGCAGCGCTAGGACTATTCTTTGTCGCTGGTATCACACAAGCTAGTGCCGCTACAGTTAACCTTCAGGGCGATTTTACTGCTCAGACTTTCTGGTTAATTTCAATGGCAATGGTTGCATCAACTGCTTTCTTCTTTCTTGAAAGAGACAGAGTTGCTGCTAAATGGAAAACTTCATTAACGCTTGCAGGTATCGTAACTGGTGTAGCAGCATGGCATTATATGTACATGAGAGGTTATTGGGTAGAAAACCAATCGTCTCCAGTAGTACTACGTTATGTTGACTGGTTAATTACAGTTCCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCTGTAACTAATGTTTCATCTTCAGTATTCTGGAAATTACTAATCGCATCTACTATCATGCTAGTATTCGGATACATGGGTGAGTCAGGAATGATGAATGTAATGACTGCATTTGTTATCGGAATGGCAGCTTGGTTATACATGATCTACGAAATCTTTGCAGGTGAAGCAGGACAAGCAAGTGCAAACAGTGGCAATGGCCCAGCACAAACTGCTTTTAATGCACTAAGATTAATCGTGACTGTTGGATGGGCGATCTATCCAATTGGTTATGCAGTAGGTTACTTTGGAGGTGGCATGAGCACAGACGTA IKGRIINMISKIKTTVIAALGLFFVAGITQASAATVNLQGDFTAQTFWLISMAMVASTAFFFLERDRVAAKWKTSLTLAGIVTGVAAWHYMYMRGYWVENQSSPVVLRYVDWLITVPILMVEFYIILKAVTNVSSSVFWKLLIASTIMLVFGYMGESGMMNVMTAFVIGMAAWLYMIYEIFAGEAGQASANSGNGPAQTAFNALRLIVTVGWAIYPIGYAVGYFGGGMSTDV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAAGGGGAGAATCATAAATATGATTTCTAAAATAAAAACTACAGTGATTGCAGCGCTAGGACTATTCTTTGTCGCTGGTATCACACAAGCTAGTGCCGCTACAGTTAACCTTCAGGGCGATTTTACTGCTCAGACTTTCTGGTTAATTTCAATGGCAATGGTTGCATCAACTGCTTTCTTCTTTCTTGAAAGAGACAGAGTTGCTGCT---AAATGGAAAACTTCATTAACGCTTGCAGGTATCGTAACTGGTGTAGCAGCATGGCATTATATGTACATGAGAGGTTATTGGGTA------------------------------GAAAAC---------------------CAATCGTCTCCAGTAGTACTACGTTATGTTGACTGG------------------------TTAATTACAGTTCCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCT---------GTA---ACTAATGTTTCATCT---TCAGTA------------------------------------TTCTGGAAA---TTACTAATCGCATCTACTATCATGCTAGTATTCGGATACATGGGTGAG---------TCA------------------GGA------ATG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ATGACTGCA---TTTGTTATCGGAATGGCAGCTTGGTTATACATGATCTACGAAATC---------------TTT------GCA---GGTGAAGCAGGACAAGCAAGTGCAAAC------AGT---GGCAATGGCCCAGCA---CAA---ACT---GCT---TTT---AAT---GCACTA---AGATTAATCGTGACTGTT---------------------------------------------------------------GGATGG---------GCGATCTATCCAATTGGTTATGCAGTAGGTTACTTTGGA---GGTGGC---------ATG---AGCACAGACGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------IKGRIINMISKIKTTVIAALGLFFVAGITQASAATVNLQGDFTAQTFWLISMAMVASTAFFFLERDRVAA-KWKTSLTLAGIVTGVAAWHYMYMRGYWV----------EN-------QSSPVVLRYVDW--------LITVPILMVEFYIILKA---V-TNVSS-SV------------FWK-LLIASTIMLVFGYMGE---S------G--M-----------M----------------------NV------MTA-FVIGMAAWLYMIYEI-----F--A-GEAGQASAN--S-GNGPA-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYPIGYAVGYFG-GG---M-STDV----------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_1105160591244 [IV-Alpha7-HOT2C01] JCVI_ORF_1105160591244 jcvi|1105160591244| 1105160591244 JCVI ORF 1105160591244 1105160591244 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 22-AUG-2003 Coastal/2m_depth/S_28.3_psu/GS004/Outside_Halifax/Nova_Scotia/North_American_East_Coast Atlantic Ocean marine 44.137222 -63.644444 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATTAAGGGGAGAATCATAAATATGATTTCTAAAATAAAAACTACAGTGATTGCAGCGCTAGGACTATTCTTTGTCGCTGGTATCACACAAGCTAGTGCCGCTACAGTTAACCTTCAGGGCGATTTTACTGCTCAGACTTTCTGGTTAATTTCAATGGCAATGGTTGCATCAACTGCTTTCTTCTTTCTTGAAAGAGACAGAGTTGCTGCTAAATGGAAAACTTCACTAACGCTTGCAGGTATCGTAACTGGTGTAGCAGCATGGCATTATATGTACATGAGAGGTTATTGGGTAGAAAACCAATCGTCTCCAGTAGTACTACGTTATGTTGACTGGTTAATTACAGTTCCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCTGTAACTAATGTTTCATCTTCAGTATTCTGGAAATTACTAATCGCATCTACTATCATGCTAGTATTCGGATACATGGGTGAGTCACGAATGATGAATGTAATGACTGCATTTGTTATCGGAATGGCAGCTTGGTTATACATGATCTACGAAATCTTTGCAGTGAGCAGACAAGCAAGTGCAAACAGTGGCAATGGCCCAGCACAAACTGCTTTTAATGCACTAAGA IKGRIINMISKIKTTVIAALGLFFVAGITQASAATVNLQGDFTAQTFWLISMAMVASTAFFFLERDRVAAKWKTSLTLAGIVTGVAAWHYMYMRGYWVENQSSPVVLRYVDWLITVPILMVEFYIILKAVTNVSSSVFWKLLIASTIMLVFGYMGESRMMNVMTAFVIGMAAWLYMIYEIFAVSRQASANSGNGPAQTAFNALR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAAGGGGAGAATCATAAATATGATTTCTAAAATAAAAACTACAGTGATTGCAGCGCTAGGACTATTCTTTGTCGCTGGTATCACACAAGCTAGTGCCGCTACAGTTAACCTTCAGGGCGATTTTACTGCTCAGACTTTCTGGTTAATTTCAATGGCAATGGTTGCATCAACTGCTTTCTTCTTTCTTGAAAGAGACAGAGTTGCTGCT---AAATGGAAAACTTCACTAACGCTTGCAGGTATCGTAACTGGTGTAGCAGCATGGCATTATATGTACATGAGAGGTTATTGGGTA------------------------------GAAAAC---------------------CAATCGTCTCCAGTAGTACTACGTTATGTTGACTGG------------------------TTAATTACAGTTCCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCT---------GTA---ACTAATGTTTCATCT---TCAGTA------------------------------------TTCTGGAAA---TTACTAATCGCATCTACTATCATGCTAGTATTCGGATACATGGGTGAG---------TCA------------------CGA------ATG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ATGACTGCA---TTTGTTATCGGAATGGCAGCTTGGTTATACATGATCTACGAAATC---------------TTT------GCA------GTGAGCAGACAAGCAAGTGCAAAC------AGT---GGCAATGGCCCAGCA---CAA---ACT---GCT---TTT---AAT---GCACTA---AGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------IKGRIINMISKIKTTVIAALGLFFVAGITQASAATVNLQGDFTAQTFWLISMAMVASTAFFFLERDRVAA-KWKTSLTLAGIVTGVAAWHYMYMRGYWV----------EN-------QSSPVVLRYVDW--------LITVPILMVEFYIILKA---V-TNVSS-SV------------FWK-LLIASTIMLVFGYMGE---S------R--M-----------M----------------------NV------MTA-FVIGMAAWLYMIYEI-----F--A--VSRQASAN--S-GNGPA-Q-T-A-F-N-AL-R------------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU795234 [IV-Alpha7-HOT2C01] ARCTIC13_B_6_genomic_EU795234 gi|193084448|gb|EU795234| Uncultured bacterium ARCTIC13 B 06 genomic sequence Uncultured bacterium ARCTIC13 B 06 genomic sequence EU795234 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:542401 genomic_DNA other 02-juil-08 #na Arctic Arctic Ocean marine 71.4 -156.8 Direct Submission Henn,M.R., Young,S., Jaffe,D.B., Gnerre,S., Berlin,A., Heiman,D., Hepburn,T., Sykes,S., Kirchman,D.L., Cottrell,M.T., Lander,E., Nusbaum,C. and Birren,B. Submitted (21MAY2008) Broad Institute of MIT and Harvard, 320 Charles Street, Cambridge, MA 02141, USA #na #na ATGATTTCTAAAATAAAAACTACAGTGATTGCAGCGCTAGGATTATTCTTTGTTGCTGGTATCACACAAGCTAGTGCCGCTACAGTTAACCTTCAGGGCGATTTTACTGCTCAGACTTTCTGGTTAATTTCAATGGCAATGGTTGCATCAACTGCTTTCTTCTTTCTTGAAAGAGACAGAGTTGCTGCTAAATGGAAAACTTCACTAACGCTTGCAGGTATCGTAACTGGTGTAGCAGCATGGCATTATATGTACATGAGAGGTTATTGGGTAGAAAACCAATCGTCTCCAGTAGTACTACGTTATGTTGACTGGTTAATTACAGTTCCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCTGTAACTAATGTTTCATCTTCAGTATTCTGGAAATTACTAATCGCATCTACTATCATGCTAGTATTCGGATACATGGGTGAGTCAGGAATGATGAATGTAATGACTGCATTTGTTATCGGAATGGCAGCTTGGTTATATATGATCTACGAAATCTTTGCAGGTGAAGCAGGACAAGCAAGTGCAAACAGTGGCAATGGCCCAGCACAAACTGCTTTTAATGCACTAAGATTAATCGTGACTGTTGGATGGGCGATCTATCCAATTGGTTATGCAGTAGGTTACTTTGGAGGTGGCATTGATGCTGGTTCTCTAAATGTAATTTATAACTTTGCAGACTTTGTTAACAAAATTGCATTCGGACTGATCATTTACGTGGCAGCTACCGCAGACAGCAACGCA MISKIKTTVIAALGLFFVAGITQASAATVNLQGDFTAQTFWLISMAMVASTAFFFLERDRVAAKWKTSLTLAGIVTGVAAWHYMYMRGYWVENQSSPVVLRYVDWLITVPILMVEFYIILKAVTNVSSSVFWKLLIASTIMLVFGYMGESGMMNVMTAFVIGMAAWLYMIYEIFAGEAGQASANSGNGPAQTAFNALRLIVTVGWAIYPIGYAVGYFGGGIDAGSLNVIYNFADFVNKIAFGLIIYVAATADSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGATTTCTAAAATAAAAACTACAGTGATTGCAGCGCTAGGATTATTCTTTGTTGCTGGTATCACACAAGCTAGTGCCGCTACAGTTAACCTTCAGGGCGATTTTACTGCTCAGACTTTCTGGTTAATTTCAATGGCAATGGTTGCATCAACTGCTTTCTTCTTTCTTGAAAGAGACAGAGTTGCTGCT---AAATGGAAAACTTCACTAACGCTTGCAGGTATCGTAACTGGTGTAGCAGCATGGCATTATATGTACATGAGAGGTTATTGGGTA------------------------------GAAAAC---------------------CAATCGTCTCCAGTAGTACTACGTTATGTTGACTGG------------------------TTAATTACAGTTCCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCT---------GTA---ACTAATGTTTCATCT---TCAGTA------------------------------------TTCTGGAAA---TTACTAATCGCATCTACTATCATGCTAGTATTCGGATACATGGGTGAG---------TCA------------------GGA------ATG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ATGACTGCA---TTTGTTATCGGAATGGCAGCTTGGTTATATATGATCTACGAAATC---------------TTT------GCA---GGTGAAGCAGGACAAGCAAGTGCAAAC------AGT---GGCAATGGCCCAGCA---CAA---ACT---GCT---TTT---AAT---GCACTA---AGATTAATCGTGACTGTT---------------------------------------------------------------GGATGG---------GCGATCTATCCAATTGGTTATGCAGTAGGTTACTTTGGA---GGTGGC------------------------------------ATTGATGCTGGTTCTCTAAATGTAATTTATAACTTTGCAGACTTTGTTAACAAAATTGCATTCGGACTGATCATTTACGTGGCAGCTACCGCAGAC---AGCAACGCA------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------MISKIKTTVIAALGLFFVAGITQASAATVNLQGDFTAQTFWLISMAMVASTAFFFLERDRVAA-KWKTSLTLAGIVTGVAAWHYMYMRGYWV----------EN-------QSSPVVLRYVDW--------LITVPILMVEFYIILKA---V-TNVSS-SV------------FWK-LLIASTIMLVFGYMGE---S------G--M-----------M----------------------NV------MTA-FVIGMAAWLYMIYEI-----F--A-GEAGQASAN--S-GNGPA-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYPIGYAVGYFG-GG------------IDAGSLNVIYNFADFVNKIAFGLIIYVAATAD-SNA-------------------------------------- [IV-Alpha7-HOT2C01]_1105159536314 [IV-Alpha7-HOT2C01] JCVI_ORF_1105159536314 jcvi|1105159536314| 1105159536314 JCVI ORF 1105159536314 1105159536314 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 22-AUG-2003 Coastal/2m_depth/S_28.3_psu/GS004/Outside_Halifax/Nova_Scotia/North_American_East_Coast Atlantic Ocean marine 44.137222 -63.644444 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATTAAGGGGAGAATCATAAATATGATTTCTAAAATAAAAACTACAGTGATTGCAGCACTTGGACTATTCTTTGTTGCTGGTATCACACAAGCTAGCGCCGCTACAGTTAACCTTCAGGGCGATTTTACTGCTCAGACCTTCTGGTTAATTTCAATGGCAATGGTTGCATCAACTGCTTTCTTCTTTCTTGAAAGAGACAGAGTTGCTGCTAAGTGGAAAACTTCACTAACGCTTGCAGGTATCGTAACTGGTGTAGCAGCATGGCATTATATGTACATGAGAGGTTATTGGGTAGAAAACCAATCGTCTCCAGTAGTACTACGTTATGTTGACTGGTTAATTACAGTTCCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCTGTAACTAATGTTTCATCTTCAGTATTCTGGAAATTACTAATCGCATCTACTATCATGCTAGTATTCGGATACATGGGTGAGTCAGGAATGATGAATGTAATGACTGCATTTGTTATCGGAATGGCAGCTTGGTTATACATGATCTACGAAATCTTTGCAGGTGAAGCAGGCCAAGCAAGTGCAAATAGTGGCAATGGTCCAGCACAAACTGCTTTTAATGCACTAAGATTAATCGTGACTGTGGCATGGCGATCAGCTGCAGCGTAT IKGRIINMISKIKTTVIAALGLFFVAGITQASAATVNLQGDFTAQTFWLISMAMVASTAFFFLERDRVAAKWKTSLTLAGIVTGVAAWHYMYMRGYWVENQSSPVVLRYVDWLITVPILMVEFYIILKAVTNVSSSVFWKLLIASTIMLVFGYMGESGMMNVMTAFVIGMAAWLYMIYEIFAGEAGQASANSGNGPAQTAFNALRLIVTVAWRSAAAY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAAGGGGAGAATCATAAATATGATTTCTAAAATAAAAACTACAGTGATTGCAGCACTTGGACTATTCTTTGTTGCTGGTATCACACAAGCTAGCGCCGCTACAGTTAACCTTCAGGGCGATTTTACTGCTCAGACCTTCTGGTTAATTTCAATGGCAATGGTTGCATCAACTGCTTTCTTCTTTCTTGAAAGAGACAGAGTTGCTGCT---AAGTGGAAAACTTCACTAACGCTTGCAGGTATCGTAACTGGTGTAGCAGCATGGCATTATATGTACATGAGAGGTTATTGGGTA------------------------------GAAAAC---------------------CAATCGTCTCCAGTAGTACTACGTTATGTTGACTGG------------------------TTAATTACAGTTCCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCT---------GTA---ACTAATGTTTCATCT---TCAGTA------------------------------------TTCTGGAAA---TTACTAATCGCATCTACTATCATGCTAGTATTCGGATACATGGGTGAG---------TCA------------------GGA------ATG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ATGACTGCA---TTTGTTATCGGAATGGCAGCTTGGTTATACATGATCTACGAAATC---------------TTT------GCA---GGTGAAGCAGGCCAAGCAAGTGCAAAT------AGT---GGCAATGGTCCAGCA---CAA---ACT---GCT---TTT---AAT---GCACTA---AGATTAATCGTGACTGTG---------------------------------------------------------------GCATGGCGATCAGCTGCAGCGTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------IKGRIINMISKIKTTVIAALGLFFVAGITQASAATVNLQGDFTAQTFWLISMAMVASTAFFFLERDRVAA-KWKTSLTLAGIVTGVAAWHYMYMRGYWV----------EN-------QSSPVVLRYVDW--------LITVPILMVEFYIILKA---V-TNVSS-SV------------FWK-LLIASTIMLVFGYMGE---S------G--M-----------M----------------------NV------MTA-FVIGMAAWLYMIYEI-----F--A-GEAGQASAN--S-GNGPA-Q-T-A-F-N-AL-RLIVTV---------------------AWRSAAAY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915960 [IV-Alpha7-HOT2C01] clone_AH009-4_EU915960 gi|229358802|gb|EU915960| Uncultured bacterium clone AH009-4 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AH009-4 putative proteorhodopsin gene, partial cds. EU915960 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTTGCCGCTACTGTATTCTTCTTTCTTGAAAGAGACAGAGTTGCTGCTAAATGGAAAACTTCACTAACGCTTGCAGGTATCGTAACTGGTGTAGCAGCATGGCATTATATGTACATGAGAGGTTATTGGGTACAATCGTCTCCAGTAGTACTACGTTATGTTGACTGGTTAATTACAGTTCCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCTGTAAATGTTTCATCTTCAGTATTCTGGAAATTACTAATCGCATCTACTATCATGCTAGTATTCGGATACATGGGTGAGTCAGGAATGATGAATGTAATGACTGCATTTGTTATCGGAATGGCAGCTTGGTTATACATGATCTACGAAATCTTTGCAGGTGAAGCAGGACAAGCAAGTGCAAACAGTGGCAATGGCCCAGCACAAACTGCTTTTAATGCACTAAGATTAATCGTGACTGTTGGATGGGCGATCTAT MVAATVFFFLERDRVAAKWKTSLTLAGIVTGVAAWHYMYMRGYWVQSSPVVLRYVDWLITVPILMVEFYIILKAVNVSSSVFWKLLIASTIMLVFGYMGESGMMNVMTAFVIGMAAWLYMIYEIFAGEAGQASANSGNGPAQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTATTCTTCTTTCTTGAAAGAGACAGAGTTGCTGCT---AAATGGAAAACTTCACTAACGCTTGCAGGTATCGTAACTGGTGTAGCAGCATGGCATTATATGTACATGAGAGGTTATTGGGTA---------------------------------------------------------CAATCGTCTCCAGTAGTACTACGTTATGTTGACTGG------------------------TTAATTACAGTTCCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCT---------GTA------AATGTTTCATCT---TCAGTA------------------------------------TTCTGGAAA---TTACTAATCGCATCTACTATCATGCTAGTATTCGGATACATGGGTGAG---------TCA------------------GGA------ATG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ATGACTGCA---TTTGTTATCGGAATGGCAGCTTGGTTATACATGATCTACGAAATC---------------TTT------GCA---GGTGAAGCAGGACAAGCAAGTGCAAAC------AGT---GGCAATGGCCCAGCA---CAA---ACT---GCT---TTT---AAT---GCACTA---AGATTAATCGTGACTGTT---------------------------------------------------------------GGATGG---------GCGATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTLAGIVTGVAAWHYMYMRGYWV-------------------QSSPVVLRYVDW--------LITVPILMVEFYIILKA---V--NVSS-SV------------FWK-LLIASTIMLVFGYMGE---S------G--M-----------M----------------------NV------MTA-FVIGMAAWLYMIYEI-----F--A-GEAGQASAN--S-GNGPA-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915889 [IV-Alpha7-HOT2C01] US080221_env_samples_EU915889 gi|229358660|gb|EU915889| Uncultured microorganism clone US080221 putative proteorhodopsin gene, partial cds Uncultured microorganism clone US080221 putative proteorhodopsin gene, partial cds EU915889 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_surface_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTGGCCGCTACTGTCTTCTTCTTTCTTGAAAGAGACAGAGATGCTGCTAAATGGAAAACTTCACTAACGCTTGCAGGTATCGTAACCGGTGTAGCAGCATGGCATTATATGTACATGAGAGGTTATTGGGTAGAAAACCAATCGTCTCCAGTAGTACTACGTTATGTTGACTGGTTAATTACAGTTCCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCTGTAACTAATGTTTCATCTTCAGTATTCTGGAAATTACTAATCGCATCTACTATCATGCTAGTATTCGGATACATGGGTGAGTCAGGAATGATGAATGTAATGACTGCATTTGTTATCGGAATGGCAGCTTGGTTATATATGATCTACGAAATCTTTGCAGGTGAAGCAGGACAAGCAAGTGCAAACAGTGGCAATGGCCCAGCACAAACTGCTTTTAATGCACTAAGGTTAATCGTGACTGTTGGATGGGCAATCTAC MLAATVFFFLERDRDAAKWKTSLTLAGIVTGVAAWHYMYMRGYWVENQSSPVVLRYVDWLITVPILMVEFYIILKAVTNVSSSVFWKLLIASTIMLVFGYMGESGMMNVMTAFVIGMAAWLYMIYEIFAGEAGQASANSGNGPAQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGTCTTCTTCTTTCTTGAAAGAGACAGAGATGCTGCT---AAATGGAAAACTTCACTAACGCTTGCAGGTATCGTAACCGGTGTAGCAGCATGGCATTATATGTACATGAGAGGTTATTGGGTA------------------------------GAAAAC---------------------CAATCGTCTCCAGTAGTACTACGTTATGTTGACTGG------------------------TTAATTACAGTTCCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCT---------GTA---ACTAATGTTTCATCT---TCAGTA------------------------------------TTCTGGAAA---TTACTAATCGCATCTACTATCATGCTAGTATTCGGATACATGGGTGAG---------TCA------------------GGA------ATG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ATGACTGCA---TTTGTTATCGGAATGGCAGCTTGGTTATATATGATCTACGAAATC---------------TTT------GCA---GGTGAAGCAGGACAAGCAAGTGCAAAC------AGT---GGCAATGGCCCAGCA---CAA---ACT---GCT---TTT---AAT---GCACTA---AGGTTAATCGTGACTGTT---------------------------------------------------------------GGATGG---------GCAATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFLERDRDAA-KWKTSLTLAGIVTGVAAWHYMYMRGYWV----------EN-------QSSPVVLRYVDW--------LITVPILMVEFYIILKA---V-TNVSS-SV------------FWK-LLIASTIMLVFGYMGE---S------G--M-----------M----------------------NV------MTA-FVIGMAAWLYMIYEI-----F--A-GEAGQASAN--S-GNGPA-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915897 [IV-Alpha7-HOT2C01] US080232_env_samples_EU915897 gi|229358676|gb|EU915897| Uncultured microorganism clone US080232 putative proteorhodopsin gene, partial cds Uncultured microorganism clone US080232 putative proteorhodopsin gene, partial cds EU915897 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_surface_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTAGCCGCTACTGCATTCTTCTTTCTTGAAAGAGACAGAGTTGCTGCTAAATGGAAAACTTCACTAACGCTTGCAGGTATCGTAACTGGTGTAGCAGCATGGCATTATATGTACATGAGAGGTTATTGGGTAGAAAACCAATCGTCTCCAGTAGTACTACGTTATGTTGACTGGTTGATTACAGTTCCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCTGTAACTAATGTTTCATCTTCAGTATTCTGGAAATTACTAATCGCATCTACTATCATGCTAGTATTCGGATACGTGGGTGAGTCAGGAATGATGAATGTAATGACTGCATTTGTTATCGGAATGGCAGCTTGGTTATACATGATCTACGAAATCTTTGCAGGTGAAGCAGGACAAGCAAGTGCAAACAGTGGCAATGGCCCAGCACAAACTGCTTTTAATGCCCTAAGATTAATCGTGACTGTTGGATGGGCCATCTAC MVAATAFFFLERDRVAAKWKTSLTLAGIVTGVAAWHYMYMRGYWVENQSSPVVLRYVDWLITVPILMVEFYIILKAVTNVSSSVFWKLLIASTIMLVFGYVGESGMMNVMTAFVIGMAAWLYMIYEIFAGEAGQASANSGNGPAQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGCATTCTTCTTTCTTGAAAGAGACAGAGTTGCTGCT---AAATGGAAAACTTCACTAACGCTTGCAGGTATCGTAACTGGTGTAGCAGCATGGCATTATATGTACATGAGAGGTTATTGGGTA------------------------------GAAAAC---------------------CAATCGTCTCCAGTAGTACTACGTTATGTTGACTGG------------------------TTGATTACAGTTCCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCT---------GTA---ACTAATGTTTCATCT---TCAGTA------------------------------------TTCTGGAAA---TTACTAATCGCATCTACTATCATGCTAGTATTCGGATACGTGGGTGAG---------TCA------------------GGA------ATG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ATGACTGCA---TTTGTTATCGGAATGGCAGCTTGGTTATACATGATCTACGAAATC---------------TTT------GCA---GGTGAAGCAGGACAAGCAAGTGCAAAC------AGT---GGCAATGGCCCAGCA---CAA---ACT---GCT---TTT---AAT---GCCCTA---AGATTAATCGTGACTGTT---------------------------------------------------------------GGATGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLERDRVAA-KWKTSLTLAGIVTGVAAWHYMYMRGYWV----------EN-------QSSPVVLRYVDW--------LITVPILMVEFYIILKA---V-TNVSS-SV------------FWK-LLIASTIMLVFGYVGE---S------G--M-----------M----------------------NV------MTA-FVIGMAAWLYMIYEI-----F--A-GEAGQASAN--S-GNGPA-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EF100809 [IV-Alpha7-HOT2C01] clone_ID29055_EF100809 gi|126513397|gb|EF100809| Uncultured bacterium clone ID29055 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID29055 putative proteorhodopsin gene, partial cds. EF100809 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-nov-07 #na surface water Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGCTGGCCGCTACTGTATTCTTCTTTCTTGAAAGAGACAGAGTTGCTGCTAAATGGAAAACTTCACTAACGCTTGCAGGTATCGTAACTGGTGTAGCAGCATGGCATTATATGTACATGAGAGGTTATTGGGTAGAAAACCAATCGTCTCCAGTAGTACTACGTTATGTTGACTGGTTGATTACAGTTTCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCTGTAACTAATGTTTCATCTTCAGTATTCTGGAAATTGCTAATCGCATCTACTATCATGCTAGTATTCGGATACATGGGTGAGTCAGGAATGATGAATGTAATGACTGCATTTGTTATCGGAATGGCAGCTTGGTTATACATGATCTACGAAATCTTTGCAGGTGAAGCAGGACAAGCAAGTGCAAACAGTGGCAATGGCCCAGCACAAACTGCTTTTAATGCCCTAAGATTAATCGTGACTGTTGGATGGGCAATTTACCCA MLAATVFFFLERDRVAAKWKTSLTLAGIVTGVAAWHYMYMRGYWVENQSSPVVLRYVDWLITVSILMVEFYIILKAVTNVSSSVFWKLLIASTIMLVFGYMGESGMMNVMTAFVIGMAAWLYMIYEIFAGEAGQASANSGNGPAQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGTATTCTTCTTTCTTGAAAGAGACAGAGTTGCTGCT---AAATGGAAAACTTCACTAACGCTTGCAGGTATCGTAACTGGTGTAGCAGCATGGCATTATATGTACATGAGAGGTTATTGGGTA------------------------------GAAAAC---------------------CAATCGTCTCCAGTAGTACTACGTTATGTTGACTGG------------------------TTGATTACAGTTTCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCT---------GTA---ACTAATGTTTCATCT---TCAGTA------------------------------------TTCTGGAAA---TTGCTAATCGCATCTACTATCATGCTAGTATTCGGATACATGGGTGAG---------TCA------------------GGA------ATG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ATGACTGCA---TTTGTTATCGGAATGGCAGCTTGGTTATACATGATCTACGAAATC---------------TTT------GCA---GGTGAAGCAGGACAAGCAAGTGCAAAC------AGT---GGCAATGGCCCAGCA---CAA---ACT---GCT---TTT---AAT---GCCCTA---AGATTAATCGTGACTGTT---------------------------------------------------------------GGATGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFLERDRVAA-KWKTSLTLAGIVTGVAAWHYMYMRGYWV----------EN-------QSSPVVLRYVDW--------LITVSILMVEFYIILKA---V-TNVSS-SV------------FWK-LLIASTIMLVFGYMGE---S------G--M-----------M----------------------NV------MTA-FVIGMAAWLYMIYEI-----F--A-GEAGQASAN--S-GNGPA-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_JX863222 [IV-Alpha7-HOT2C01] MALINA_OTU01_020_L_env_samples_JX863222 gi|425477394|gb|JX863222| Uncultured bacterium clone MALINA OTU01 020 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU01 020 L putative proteorhodopsin mRNA, partial cds JX863222 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 07Aug2009 20m_depth Arctic Ocean marine 70.91 -128.92 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGATTACAGTTCCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCTGTAACTAATGTTTCATCTTCAGTATTCTGGAAATTACTAATCGCATCTACTATCATGCTAGTATTCGGATACATGGGTGAGTCAGGAATGATGAATGTAATGACTGCATTTGTTATCGGAATGGCAGCTTGGTTATACATGATCTACGAAATCTCTGCAGGTGAAGCAGGACAAGCAAGTGCAAACAGTGGCAATGGCCCAGCACAAACTGCTTTTAATGCACTAAGATTAATCGTGACTGTT WLITVPILMVEFYIILKAVTNVSSSVFWKLLIASTIMLVFGYMGESGMMNVMTAFVIGMAAWLYMIYEISAGEAGQASANSGNGPAQTAFNALRLIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGATTACAGTTCCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCT---------GTA---ACTAATGTTTCATCT---TCAGTA------------------------------------TTCTGGAAA---TTACTAATCGCATCTACTATCATGCTAGTATTCGGATACATGGGTGAG---------TCA------------------GGA------ATG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ATGACTGCA---TTTGTTATCGGAATGGCAGCTTGGTTATACATGATCTACGAAATC---------------TCT------GCA---GGTGAAGCAGGACAAGCAAGTGCAAAC------AGT---GGCAATGGCCCAGCA---CAA---ACT---GCT---TTT---AAT---GCACTA---AGATTAATCGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPILMVEFYIILKA---V-TNVSS-SV------------FWK-LLIASTIMLVFGYMGE---S------G--M-----------M----------------------NV------MTA-FVIGMAAWLYMIYEI-----S--A-GEAGQASAN--S-GNGPA-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_JX863221 [IV-Alpha7-HOT2C01] MALINA_OTU01_253_L_env_samples_JX863221 gi|425477392|gb|JX863221| Uncultured bacterium clone MALINA OTU01 253 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU01 253 L putative proteorhodopsin mRNA, partial cds JX863221 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 11Aug2009 3m_depth Arctic Ocean marine 70.68 -139.62 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATTACAGTTCCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCTGTAACTAATGTTTCATCTTCAGTATTCTGGAAATTACTAATCGCATCTACTATCATGCTAGTATTCGGATACATGGGTGAGTCAGGAATGATGAATGTAATGACTGCATTTGTTATCGGAATGGCAGCTTGGTTATACATGATCTACGAAATCTTTGCAGGTGAAGCAGGACAAGCAAGTGCAAACAGTGGCAATGGCCCAGCACAAACTGCTTTTAATGCACTAAGATTAATCGTGACCGTT WLITVPILMVEFYIILKAVTNVSSSVFWKLLIASTIMLVFGYMGESGMMNVMTAFVIGMAAWLYMIYEIFAGEAGQASANSGNGPAQTAFNALRLIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATTACAGTTCCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCT---------GTA---ACTAATGTTTCATCT---TCAGTA------------------------------------TTCTGGAAA---TTACTAATCGCATCTACTATCATGCTAGTATTCGGATACATGGGTGAG---------TCA------------------GGA------ATG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ATGACTGCA---TTTGTTATCGGAATGGCAGCTTGGTTATACATGATCTACGAAATC---------------TTT------GCA---GGTGAAGCAGGACAAGCAAGTGCAAAC------AGT---GGCAATGGCCCAGCA---CAA---ACT---GCT---TTT---AAT---GCACTA---AGATTAATCGTGACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPILMVEFYIILKA---V-TNVSS-SV------------FWK-LLIASTIMLVFGYMGE---S------G--M-----------M----------------------NV------MTA-FVIGMAAWLYMIYEI-----F--A-GEAGQASAN--S-GNGPA-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_JX863223 [IV-Alpha7-HOT2C01] MALINA_OTU01_164_L_env_samples_JX863223 gi|425477396|gb|JX863223| Uncultured bacterium clone MALINA OTU01 164 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU01 164 L putative proteorhodopsin mRNA, partial cds JX863223 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 08Aug2009 3m_depth Arctic Ocean marine 70.8 -133.73 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATTACAGTTCCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCTGTAACTAATGTTTCATCATCAGTATTCTGGAAATTACTAATCGCATCTGCTATCATGCTAGTATTCGGATACATGGGTGAGTCAGGAATGATGAATGTAATGACTGCATTTGTTATCGGAATGGCAGCTTGGTTATACATGATCTACGAAATCTTTGCAGGTGAAGCAGGACAAGCAAGTGCAAACAGTGGCAATGGCCCAGCACAAACTGCTTTTAATGCACTAAGATTAATCGTGACTGTT WLITVPILMVEFYIILKAVTNVSSSVFWKLLIASAIMLVFGYMGESGMMNVMTAFVIGMAAWLYMIYEIFAGEAGQASANSGNGPAQTAFNALRLIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATTACAGTTCCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCT---------GTA---ACTAATGTTTCATCA---TCAGTA------------------------------------TTCTGGAAA---TTACTAATCGCATCTGCTATCATGCTAGTATTCGGATACATGGGTGAG---------TCA------------------GGA------ATG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ATGACTGCA---TTTGTTATCGGAATGGCAGCTTGGTTATACATGATCTACGAAATC---------------TTT------GCA---GGTGAAGCAGGACAAGCAAGTGCAAAC------AGT---GGCAATGGCCCAGCA---CAA---ACT---GCT---TTT---AAT---GCACTA---AGATTAATCGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPILMVEFYIILKA---V-TNVSS-SV------------FWK-LLIASAIMLVFGYMGE---S------G--M-----------M----------------------NV------MTA-FVIGMAAWLYMIYEI-----F--A-GEAGQASAN--S-GNGPA-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_JX863109 [IV-Alpha7-HOT2C01] MALINA_OTU01_457_L_env_samples_JX863109 gi|425477168|gb|JX863109| Uncultured bacterium clone MALINA OTU01 457 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU01 457 L putative proteorhodopsin gene, partial cds JX863109 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 13Aug2009 0m_depth Arctic Ocean marine 69.25 -137.2 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATTACAGTTCCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCTGTAACTAATGTTTCATCTTCAGTATTCTGGAAATTACTAATCGCATCTACTATCATGCTAGTATTCGGATACATGGGTGAGTCAGGAATGATGAATGTAATGACTGCATTTGTTATCGGAGTGGCAGCTTGGTTATACATGATCTACGAAATCTTTGCAGGTGAAGCAGGGCAAGCAAGTGCAAACAGTGGCAATGGCCCAGCACAAACTGCTTTTAATGCACTAAGATTAATCGTGACTGTT WLITVPILMVEFYIILKAVTNVSSSVFWKLLIASTIMLVFGYMGESGMMNVMTAFVIGVAAWLYMIYEIFAGEAGQASANSGNGPAQTAFNALRLIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATTACAGTTCCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCT---------GTA---ACTAATGTTTCATCT---TCAGTA------------------------------------TTCTGGAAA---TTACTAATCGCATCTACTATCATGCTAGTATTCGGATACATGGGTGAG---------TCA------------------GGA------ATG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ATGACTGCA---TTTGTTATCGGAGTGGCAGCTTGGTTATACATGATCTACGAAATC---------------TTT------GCA---GGTGAAGCAGGGCAAGCAAGTGCAAAC------AGT---GGCAATGGCCCAGCA---CAA---ACT---GCT---TTT---AAT---GCACTA---AGATTAATCGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPILMVEFYIILKA---V-TNVSS-SV------------FWK-LLIASTIMLVFGYMGE---S------G--M-----------M----------------------NV------MTA-FVIGVAAWLYMIYEI-----F--A-GEAGQASAN--S-GNGPA-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_JX863108 [IV-Alpha7-HOT2C01] MALINA_OTU01_368_L_env_samples_JX863108 gi|425477166|gb|JX863108| Uncultured bacterium clone MALINA OTU01 368 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU01 368 L putative proteorhodopsin gene, partial cds JX863108 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 08-juil-09 0m_depth Pacific Ocean marine 53.36 -159.29 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATTACAGTTCCAATCTTAATGGTTGAGTTCTATACCATACTAAAAGCTGTAACTAATGTTTCATCTTCAGTATTCTGGAAATTACTAATCGCATCTACTATCATGCTAGTATTCGGATACATGGGTGAGTCAGGAATGATGAATGTAATGACTGCATTTGTTATCGGAATGGCAGCTTGGTTATACATGATCTACGAAATCTTTGCAGGTGAAGCAGGACAAGCAAGTGCAAACAGTGGCAATGGCCCAGCACAAGCTGCTTTTAATGCACTAAGATTAATCGTGACTGTT WLITVPILMVEFYTILKAVTNVSSSVFWKLLIASTIMLVFGYMGESGMMNVMTAFVIGMAAWLYMIYEIFAGEAGQASANSGNGPAQAAFNALRLIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATTACAGTTCCAATCTTAATGGTTGAGTTCTATACCATACTAAAAGCT---------GTA---ACTAATGTTTCATCT---TCAGTA------------------------------------TTCTGGAAA---TTACTAATCGCATCTACTATCATGCTAGTATTCGGATACATGGGTGAG---------TCA------------------GGA------ATG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ATGACTGCA---TTTGTTATCGGAATGGCAGCTTGGTTATACATGATCTACGAAATC---------------TTT------GCA---GGTGAAGCAGGACAAGCAAGTGCAAAC------AGT---GGCAATGGCCCAGCA---CAA---GCT---GCT---TTT---AAT---GCACTA---AGATTAATCGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPILMVEFYTILKA---V-TNVSS-SV------------FWK-LLIASTIMLVFGYMGE---S------G--M-----------M----------------------NV------MTA-FVIGMAAWLYMIYEI-----F--A-GEAGQASAN--S-GNGPA-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_JX863105 [IV-Alpha7-HOT2C01] MALINA_OTU01_130_L_env_samples_JX863105 gi|425477160|gb|JX863105| Uncultured bacterium clone MALINA OTU01 130 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU01 130 L putative proteorhodopsin gene, partial cds JX863105 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 08Aug2009 3m_depth Arctic Ocean marine 70.8 -133.73 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATTACAGTTCCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCTGTAACTAATGTTTCATCTTCAGTATTCTGGAAATTACTAATCGCATCTACTATCATGCTAGTATTCGGATACATGGGTGAGTCAGGAATGATGAGTGTAATGACTGCATTTGTTATCGGAATGGCAGCTTGGTTATACATGATCTACGAAATCTTTGCAGGTGAAGCAGGACAAGCAAGTGCAAACAGTGGCAATGGCCCAGCACAAACTGCTTTTAATGCACTAAGATTAATCGTGACTGTT WLITVPILMVEFYIILKAVTNVSSSVFWKLLIASTIMLVFGYMGESGMMSVMTAFVIGMAAWLYMIYEIFAGEAGQASANSGNGPAQTAFNALRLIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATTACAGTTCCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCT---------GTA---ACTAATGTTTCATCT---TCAGTA------------------------------------TTCTGGAAA---TTACTAATCGCATCTACTATCATGCTAGTATTCGGATACATGGGTGAG---------TCA------------------GGA------ATG---------------------------------ATG------------------------------------------------------------------AGTGTA------------------ATGACTGCA---TTTGTTATCGGAATGGCAGCTTGGTTATACATGATCTACGAAATC---------------TTT------GCA---GGTGAAGCAGGACAAGCAAGTGCAAAC------AGT---GGCAATGGCCCAGCA---CAA---ACT---GCT---TTT---AAT---GCACTA---AGATTAATCGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPILMVEFYIILKA---V-TNVSS-SV------------FWK-LLIASTIMLVFGYMGE---S------G--M-----------M----------------------SV------MTA-FVIGMAAWLYMIYEI-----F--A-GEAGQASAN--S-GNGPA-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EF088600 [IV-Alpha7-HOT2C01] E400021_env_samples_EF088600 gi|126843441|gb|EF088600| Uncultured bacterium clone E400021 putative proteorhodopsin gene, partial cds Uncultured bacterium clone E400021 putative proteorhodopsin gene, partial cds EF088600 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na Bering_Sea_surface_water_sample Arctic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTGGCCGCTACTGCTTTCTTCTTTCTTGAAAGAGACAGAGTTGCTGCTAAATGGAAAACTTCACTAACGCTTGCAGGTATCGTAACTGGTGTAGCAGCATGGCATTATATGTACATGAGAGGTTATTGGGTAGAAAACCAATCGTCTCCAGTAGTACTTCGTTATGTTGACTGGTTAATTACAGTTCCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCTGTAACTAATGTTTCATCTTCAGTGTTCTGGAAATTACTAATCGCATCTACTATCATGCTAGTATTCGGATACATGGGTGAGTCAGGAATGATGAATGTAATGACTGCATTTGTTATAGGAATGGCAGCTTGGTTATACATGATCTACGAAATCTTTGCAGGTGAAGCAGGACAAGCAAGTGCAAACAGTGGCAATGGCCCAGCACAAACTGCTTTTAATGCACTAAGATTAATCGTGACTGTTGGGTGGGCAATCTACCCA MVAATAFFFLERDRVAAKWKTSLTLAGIVTGVAAWHYMYMRGYWVENQSSPVVLRYVDWLITVPILMVEFYIILKAVTNVSSSVFWKLLIASTIMLVFGYMGESGMMNVMTAFVIGMAAWLYMIYEIFAGEAGQASANSGNGPAQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCTTTCTTCTTTCTTGAAAGAGACAGAGTTGCTGCT---AAATGGAAAACTTCACTAACGCTTGCAGGTATCGTAACTGGTGTAGCAGCATGGCATTATATGTACATGAGAGGTTATTGGGTA------------------------------GAAAAC---------------------CAATCGTCTCCAGTAGTACTTCGTTATGTTGACTGG------------------------TTAATTACAGTTCCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCT---------GTA---ACTAATGTTTCATCT---TCAGTG------------------------------------TTCTGGAAA---TTACTAATCGCATCTACTATCATGCTAGTATTCGGATACATGGGTGAG---------TCA------------------GGA------ATG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ATGACTGCA---TTTGTTATAGGAATGGCAGCTTGGTTATACATGATCTACGAAATC---------------TTT------GCA---GGTGAAGCAGGACAAGCAAGTGCAAAC------AGT---GGCAATGGCCCAGCA---CAA---ACT---GCT---TTT---AAT---GCACTA---AGATTAATCGTGACTGTT---------------------------------------------------------------GGGTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLERDRVAA-KWKTSLTLAGIVTGVAAWHYMYMRGYWV----------EN-------QSSPVVLRYVDW--------LITVPILMVEFYIILKA---V-TNVSS-SV------------FWK-LLIASTIMLVFGYMGE---S------G--M-----------M----------------------NV------MTA-FVIGMAAWLYMIYEI-----F--A-GEAGQASAN--S-GNGPA-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_JX863107 [IV-Alpha7-HOT2C01] MALINA_OTU01_160_L_env_samples_JX863107 gi|425477164|gb|JX863107| Uncultured bacterium clone MALINA OTU01 160 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU01 160 L putative proteorhodopsin gene, partial cds JX863107 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 11Aug2009 80m_depth Arctic Ocean marine 70.68 -139.62 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATTACAGTTCCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCTGTAACTAATGTTTCATCTTCAGTGTTCTGGAAATTACTAATCGCATCTACTATCATGCTAGTATTCGGATACATGGGTGAGTCAGGAATGATGGATGTAATGACTGCATTTGTTATCGGAATGGCAGCTTGGTTATACATGATCTACGAAATCTTTGCAGGTGAAGCAGGACAAGCAAGTGCAAACAGTGGCAATGGCCCAGCACAAACTGCTTTTAATGCACTAAGATTAATCGTGACTGTT WLITVPILMVEFYIILKAVTNVSSSVFWKLLIASTIMLVFGYMGESGMMDVMTAFVIGMAAWLYMIYEIFAGEAGQASANSGNGPAQTAFNALRLIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATTACAGTTCCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCT---------GTA---ACTAATGTTTCATCT---TCAGTG------------------------------------TTCTGGAAA---TTACTAATCGCATCTACTATCATGCTAGTATTCGGATACATGGGTGAG---------TCA------------------GGA------ATG---------------------------------ATG------------------------------------------------------------------GATGTA------------------ATGACTGCA---TTTGTTATCGGAATGGCAGCTTGGTTATACATGATCTACGAAATC---------------TTT------GCA---GGTGAAGCAGGACAAGCAAGTGCAAAC------AGT---GGCAATGGCCCAGCA---CAA---ACT---GCT---TTT---AAT---GCACTA---AGATTAATCGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPILMVEFYIILKA---V-TNVSS-SV------------FWK-LLIASTIMLVFGYMGE---S------G--M-----------M----------------------DV------MTA-FVIGMAAWLYMIYEI-----F--A-GEAGQASAN--S-GNGPA-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915961 [IV-Alpha7-HOT2C01] clone_AH009-7_EU915961 gi|229358804|gb|EU915961| Uncultured bacterium clone AH009-7 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AH009-7 putative proteorhodopsin gene, partial cds. EU915961 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTCGCCGCTACTGTATTCTTCTTTCTTGAAAGAGACAGAGTTGCTGCTAAATGGAAAACTTCACTAACGCTTGCAGGTATCGTAACTGGTGTAGCAGTATGGCATTATATGTGCATGAGAGGTTATTGGGTACAATCGTCTCCAGTAGTACTTCGTTATGTTGACTGGTTAATTACAGTTCCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCTGTAAATGTTTCATCTTCAGTGTTCTGGAAATTACTAATCGCATCTACTATCATGCTAGTATTCGGATACATGGGTGAGTCAGGAATGATGAATGTAATGACTGCATTTGTTATAGGAATGGCAGCTTGGTTATACATGATCTACGAAATCTTTGCAGGTGAAGCAGGACAAGCAAGTGCAAACAGTGGCAATGGCCCAGCACAAACTGCTTTTAATGCACTAAGATTAATCGTGACTGTTGGATGGGCGATCTAT MLAATVFFFLERDRVAAKWKTSLTLAGIVTGVAVWHYMCMRGYWVQSSPVVLRYVDWLITVPILMVEFYIILKAVNVSSSVFWKLLIASTIMLVFGYMGESGMMNVMTAFVIGMAAWLYMIYEIFAGEAGQASANSGNGPAQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTCGCCGCTACTGTATTCTTCTTTCTTGAAAGAGACAGAGTTGCTGCT---AAATGGAAAACTTCACTAACGCTTGCAGGTATCGTAACTGGTGTAGCAGTATGGCATTATATGTGCATGAGAGGTTATTGGGTA---------------------------------------------------------CAATCGTCTCCAGTAGTACTTCGTTATGTTGACTGG------------------------TTAATTACAGTTCCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCT---------GTA------AATGTTTCATCT---TCAGTG------------------------------------TTCTGGAAA---TTACTAATCGCATCTACTATCATGCTAGTATTCGGATACATGGGTGAG---------TCA------------------GGA------ATG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ATGACTGCA---TTTGTTATAGGAATGGCAGCTTGGTTATACATGATCTACGAAATC---------------TTT------GCA---GGTGAAGCAGGACAAGCAAGTGCAAAC------AGT---GGCAATGGCCCAGCA---CAA---ACT---GCT---TTT---AAT---GCACTA---AGATTAATCGTGACTGTT---------------------------------------------------------------GGATGG---------GCGATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFLERDRVAA-KWKTSLTLAGIVTGVAVWHYMCMRGYWV-------------------QSSPVVLRYVDW--------LITVPILMVEFYIILKA---V--NVSS-SV------------FWK-LLIASTIMLVFGYMGE---S------G--M-----------M----------------------NV------MTA-FVIGMAAWLYMIYEI-----F--A-GEAGQASAN--S-GNGPA-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_JX863224 [IV-Alpha7-HOT2C01] MALINA_OTU01_178_L_env_samples_JX863224 gi|425477398|gb|JX863224| Uncultured bacterium clone MALINA OTU01 178 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU01 178 L putative proteorhodopsin mRNA, partial cds JX863224 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 08Aug2009 3m_depth Arctic Ocean marine 70.8 -133.73 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATTACAGTTCCAATCTTAATGGTTGAGTTCTTTATCATACTTAAAGCTGTAACTAATGTTTCATCTTCAGTGTTCTGGAAATTACTAATCGCATCTACTATCATGCTAGTATTTGGATACATGGGTGAGTCAGGTATGATGAATGTAATGACTGCATTTGTTATCGGAATGGCAGCTTGGTTATACATGATCTACGAAATCTTTGCAGGTGAAGCAGGACAAGCAAGTGCAAACAGTGGCAATGGCCCAGCACAAACTGCTTTTAATGCACTAAGATTAATCGTGACTGTT WLITVPILMVEFFIILKAVTNVSSSVFWKLLIASTIMLVFGYMGESGMMNVMTAFVIGMAAWLYMIYEIFAGEAGQASANSGNGPAQTAFNALRLIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATTACAGTTCCAATCTTAATGGTTGAGTTCTTTATCATACTTAAAGCT---------GTA---ACTAATGTTTCATCT---TCAGTG------------------------------------TTCTGGAAA---TTACTAATCGCATCTACTATCATGCTAGTATTTGGATACATGGGTGAG---------TCA------------------GGT------ATG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ATGACTGCA---TTTGTTATCGGAATGGCAGCTTGGTTATACATGATCTACGAAATC---------------TTT------GCA---GGTGAAGCAGGACAAGCAAGTGCAAAC------AGT---GGCAATGGCCCAGCA---CAA---ACT---GCT---TTT---AAT---GCACTA---AGATTAATCGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPILMVEFFIILKA---V-TNVSS-SV------------FWK-LLIASTIMLVFGYMGE---S------G--M-----------M----------------------NV------MTA-FVIGMAAWLYMIYEI-----F--A-GEAGQASAN--S-GNGPA-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915953 [IV-Alpha7-HOT2C01] clone_A-H009-8_EU915953 gi|229358788|gb|EU915953| Uncultured bacterium clone A-H009-8 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A-H009-8 putative proteorhodopsin gene, partial cds. EU915953 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTAGCCGCTACTGCATTCTTCTTTCTTGAAAGAGACAGAGTTGCTGCTAAATGGAAAACTTCGCTAACGCTTGCAGGTATCGTAACTGGTGTAGCAGCATGGCATTATATGTACATGAGAGGTTATTGGGTACAATCGTCTCCAGTAGTACTTCGTTATGTTGACTGGTTAATTACAGTTCCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCTGTAAATGTTTCATCTTCAGTGTTCTGGAAATTACTAATCGCATCTACTATAATGCTAGTATTCGGATACATGGGTGAGTCAGGAATGATGAATGTAATGACTGCATTTGTTATCGGAATGGCAGCTTGGTTATACATGATCTACGAAACCTTTGCAGGTGAAGCAGGACAAGCAAGTGCAAACAGTGGCAATGGCCCAGCACAAACTGCTTTTAATGCACTAAGATTAATCGTGACTGTTGGATGGGCGATCTAT MVAATAFFFLERDRVAAKWKTSLTLAGIVTGVAAWHYMYMRGYWVQSSPVVLRYVDWLITVPILMVEFYIILKAVNVSSSVFWKLLIASTIMLVFGYMGESGMMNVMTAFVIGMAAWLYMIYETFAGEAGQASANSGNGPAQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGCATTCTTCTTTCTTGAAAGAGACAGAGTTGCTGCT---AAATGGAAAACTTCGCTAACGCTTGCAGGTATCGTAACTGGTGTAGCAGCATGGCATTATATGTACATGAGAGGTTATTGGGTA---------------------------------------------------------CAATCGTCTCCAGTAGTACTTCGTTATGTTGACTGG------------------------TTAATTACAGTTCCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCT---------GTA------AATGTTTCATCT---TCAGTG------------------------------------TTCTGGAAA---TTACTAATCGCATCTACTATAATGCTAGTATTCGGATACATGGGTGAG---------TCA------------------GGA------ATG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ATGACTGCA---TTTGTTATCGGAATGGCAGCTTGGTTATACATGATCTACGAAACC---------------TTT------GCA---GGTGAAGCAGGACAAGCAAGTGCAAAC------AGT---GGCAATGGCCCAGCA---CAA---ACT---GCT---TTT---AAT---GCACTA---AGATTAATCGTGACTGTT---------------------------------------------------------------GGATGG---------GCGATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLERDRVAA-KWKTSLTLAGIVTGVAAWHYMYMRGYWV-------------------QSSPVVLRYVDW--------LITVPILMVEFYIILKA---V--NVSS-SV------------FWK-LLIASTIMLVFGYMGE---S------G--M-----------M----------------------NV------MTA-FVIGMAAWLYMIYET-----F--A-GEAGQASAN--S-GNGPA-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_JX863106 [IV-Alpha7-HOT2C01] MALINA_OTU01_092_L_env_samples_JX863106 gi|425477162|gb|JX863106| Uncultured bacterium clone MALINA OTU01 092 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU01 092 L putative proteorhodopsin gene, partial cds JX863106 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 08Aug2009 70m_depth Arctic Ocean marine 70.8 -133.73 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGATTACAGTTCCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCTGTAACTAATGTTTCATCTGCAGTGTTCTGGAAATTACTAATTGCATCTACAATAATGCTAGTATTTGGATACATGGGTGAGTCAGGAATAATGAATGTAATGACTGCATTTGTTATCGGAATGGCAGCTTGGTTATATATGATCTACGAAATCTTTGCAGGTGAAGCAGGACAAGCAAGTGCAAACAGTGGCAATGGCCCAGCACAAACTGCTTTTAATGCACTAAGATTAATCGTGACTGTT WLITVPILMVEFYIILKAVTNVSSAVFWKLLIASTIMLVFGYMGESGIMNVMTAFVIGMAAWLYMIYEIFAGEAGQASANSGNGPAQTAFNALRLIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGATTACAGTTCCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCT---------GTA---ACTAATGTTTCATCT---GCAGTG------------------------------------TTCTGGAAA---TTACTAATTGCATCTACAATAATGCTAGTATTTGGATACATGGGTGAG---------TCA------------------GGA------ATA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ATGACTGCA---TTTGTTATCGGAATGGCAGCTTGGTTATATATGATCTACGAAATC---------------TTT------GCA---GGTGAAGCAGGACAAGCAAGTGCAAAC------AGT---GGCAATGGCCCAGCA---CAA---ACT---GCT---TTT---AAT---GCACTA---AGATTAATCGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPILMVEFYIILKA---V-TNVSS-AV------------FWK-LLIASTIMLVFGYMGE---S------G--I-----------M----------------------NV------MTA-FVIGMAAWLYMIYEI-----F--A-GEAGQASAN--S-GNGPA-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_JX863225 [IV-Alpha7-HOT2C01] MALINA_OTU01_259_L_env_samples_JX863225 gi|425477400|gb|JX863225| Uncultured bacterium clone MALINA OTU01 259 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU01 259 L putative proteorhodopsin mRNA, partial cds JX863225 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 11Aug2009 3m_depth Arctic Ocean marine 70.68 -139.62 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATTACCGTGCCAATCTTAATGGTTGAGTTTTATATAATTCTTAAAGCTGTAAGCAATGTTGCTTCTTCAGTATTTTGGAAATTACTAATTGCATCTCTTGTAATGTTAGTTTTCGGTTACTTAGGTGAAGCTGGAATGATGAATGTAATGACAGCCTTTGTTATTTCAATGGCGGCTTGGTTATACATCATCTATGAAATCTTTGCTGGTGAAGCAGGACAAGCAAGTGCGAGTAGTGGCAATGGCCCAGCGCAAACTGCTTTTAATGCATTAAGACTGATTGTAACTATC WLITVPILMVEFYIILKAVSNVASSVFWKLLIASLVMLVFGYLGEAGMMNVMTAFVISMAAWLYIIYEIFAGEAGQASASSGNGPAQTAFNALRLIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATTACCGTGCCAATCTTAATGGTTGAGTTTTATATAATTCTTAAAGCT---------GTA---AGCAATGTTGCTTCT---TCAGTA------------------------------------TTTTGGAAA---TTACTAATTGCATCTCTTGTAATGTTAGTTTTCGGTTACTTAGGTGAA---------GCT------------------GGA------ATG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ATGACAGCC---TTTGTTATTTCAATGGCGGCTTGGTTATACATCATCTATGAAATC---------------TTT------GCT---GGTGAAGCAGGACAAGCAAGTGCGAGT------AGT---GGCAATGGCCCAGCG---CAA---ACT---GCT---TTT---AAT---GCATTA---AGACTGATTGTAACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPILMVEFYIILKA---V-SNVAS-SV------------FWK-LLIASLVMLVFGYLGE---A------G--M-----------M----------------------NV------MTA-FVISMAAWLYIIYEI-----F--A-GEAGQASAS--S-GNGPA-Q-T-A-F-N-AL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ339384 [IV-Alpha7-HOT2C01] clone_S-S4OM-E8_DQ339384 gi|85681739|gb|DQ339384| Uncultured bacterium clone S-S4OM-E8 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-E8 predicted proteorhodopsin gene, partial cds. DQ339384 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATTACTGTGCCTCTACAAATCGTAGAATTCTGTGTAATTCTTGCAGCAATGACAGCTGTTGCTTCTGGGTTATTCTGGAGACTATTAATAGCTTCTATTATAATGCTAGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTTGGTCTAGCCTTCGTAATAGGAATGGCTGGCTGGTTGTATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTGATTGTTACAGTAGGGTGGGCCATCTATCCA RYIDWLITVPLQIVEFCVILAAMTAVASGLFWRLLIASIIMLVGGYLGEVGAMNVGLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATTACTGTGCCTCTACAAATCGTAGAATTCTGTGTAATTCTTGCAGCA---------ATG---ACAGCTGTTGCTTCT---GGGTTA------------------------------------TTCTGGAGA---CTATTAATAGCTTCTATTATAATGCTAGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTT------------------GGTCTAGCC---TTCGTAATAGGAATGGCTGGCTGGTTGTATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTGATTGTTACAGTA---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFCVILAA---M-TAVAS-GL------------FWR-LLIASIIMLVGGYLGE---V------G--A-----------M----------------------NV------GLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EF079837 [IV-Alpha7-HOT2C01] clone_ID11005_EF079837 gi|126361763|gb|EF079837| Uncultured bacterium clone ID11005 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID11005 putative proteorhodopsin gene, partial cds. EF079837 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na #na Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGCTCGCCGCTACTGCTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCTACAGTCCTTCGTTACATTGACTGGCTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCTATGACTGCTGTTGCTTCTAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTACATGGGAGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAAGTTTTTGCAGGTGAAGCTAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTAGGGTGGGCGATCTACCCA MLAATAFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTCGCCGCTACTGCTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCTACAGTCCTTCGTTACATTGACTGG------------------------CTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCT---------ATG---ACTGCTGTTGCTTCT---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTACATGGGAGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAAGTT---------------TTT------GCA---GGTGAAGCTAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGGTGG---------GCGATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_1105078712205 [IV-Alpha7-HOT2C01] JCVI_ORF_1105078712205 jcvi|1105078712205| 1105078712205 JCVI ORF 1105078712205 1105078712205 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 08-janv-04 Coastal_Sea/2m_depth/S_35.8_psu/GS016/Gulf_of_Mexico/Caribbean_Sea Caribbean Sea marine 24.174723 -84.344444 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGTGCGCTACTGCTTCTTCTTTCTTGAAAGAAGATCGTGTAGCAGCTAAATGGAAAACGTACCTTACGGTAGCTGGTTTGGTTACTGGTACTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTAGGATGGGCAATTTATCCAATTGGTTATGCTGTAGGTTACTTTGGTGGCGGCGTTGACGCTGGCGCATTGAACTTAATCTATAACCTTGCAGACTTTGTTAATAAAATTGCATTTGGTATGGCTATTTATGTAGCTGCAGTATCAGACAGCAAC MCATASSFLKEDRVAAKWKTYLTVAGLVTGTAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYPIGYAVGYFGGGVDAGALNLIYNLADFVNKIAFGMAIYVAAVSDSN ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTGCGCTACTGCTTCTTCTTTCTTGAAAGAAGATCGTGTAGCAGCT---AAATGGAAAACGTACCTTACGGTAGCTGGTTTGGTTACTGGTACTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGATGG---------GCAATTTATCCAATTGGTTATGCTGTAGGTTACTTTGGT---GGCGGC---------------------------GTTGACGCT---------GGCGCATTGAACTTAATCTATAACCTTGCAGACTTTGTTAATAAAATTGCATTTGGTATGGCTATTTATGTAGCTGCAGTATCAGAC---AGCAAC--------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MCATASSFLKEDRVAA-KWKTYLTVAGLVTGTAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYPIGYAVGYFG-GG---------VDA---GALNLIYNLADFVNKIAFGMAIYVAAVSD-SN--------------------------------------- [IV-Alpha7-HOT2C01]_EU916146 [IV-Alpha7-HOT2C01] clone_a-xm-29_EU916146 gi|229359166|gb|EU916146| Uncultured bacterium clone a-xm-29 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone a-xm-29 putative proteorhodopsin gene, partial cds. EU916146 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTTGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTAGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTTGTCTTTGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATACATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTAGGATGGGCAATTTAT MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTAGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT---------------------------------------------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTTGTCTTTGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATACATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGATGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_AY372455 [IV-Alpha7-HOT2C01] marine_Alphaproteobacterium_HOT2C01_AY372455 gi|37912985|gb|AY372455| Uncultured marine alpha proteobacterium HOT2C01 fosmid clone Uncultured marine alpha proteobacterium HOT2C01 fosmid clone AY372455 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/Proteobacteria/Alphaproteobacteria/environmental samples] taxon:248049 genomic_DNA other 24-oct-03 #na surface_bacterioplankton_from_Hawaii_Ocean_TimeSeries_[HOTS]_Station_ALOHA Pacific Ocean marine 22.75 -158 Proteorhodopsin genes are distributed among divergent marine bacterial taxa de la Torre,J.R., Christianson,L.M., Beja,O., Suzuki,M.T., Karl,D.M., Heidelberg,J. and DeLong,E.F. Proc. Natl. Acad. Sci. U.S.A. 100 (22), 1283012835 (2003) 14566056 #na ATGAAAGTATTAATGCTAAATCCCGGAGATCACGTTGCGATTTCGTTTTGGTTGATCTCTATGGCCATGGTTGCCGCTACTGCTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTAGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACTGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTACGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTTGTCTTTGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATACATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTAGGATGGGCAATTTATCCAATTGGTTATGCTGTAGGTTACTTCGGTGGTGGCGTAGACGCCGGTTCATTGAACTTAATCTATAACCTTGCAGACTTTGTTAATAAAATTGCATTTGGTATGGCTATTTATGTAGCTGCAGTATCAGACAGCAAC MKVLMLNPGDHVAISFWLISMAMVAATAFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYPIGYAVGYFGGGVDAGSLNLIYNLADFVNKIAFGMAIYVAAVSDSN ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAGTATTAATGCTAAATCCCGGAGATCACGTTGCGATTTCGTTTTGGTTGATCTCTATGGCCATGGTTGCCGCTACTGCTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTAGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACTGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTACGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTTGTCTTTGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATACATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGATGG---------GCAATTTATCCAATTGGTTATGCTGTAGGTTACTTCGGT---GGTGGC---------------------------GTAGACGCC---------GGTTCATTGAACTTAATCTATAACCTTGCAGACTTTGTTAATAAAATTGCATTTGGTATGGCTATTTATGTAGCTGCAGTATCAGAC---AGCAAC--------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------MKVLMLNPGDHVAISFWLISMAMVAATAFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYPIGYAVGYFG-GG---------VDA---GSLNLIYNLADFVNKIAFGMAIYVAAVSD-SN--------------------------------------- [IV-Alpha7-HOT2C01]_EU915958 [IV-Alpha7-HOT2C01] clone_AH009-1_EU915958 gi|229358798|gb|EU915958| Uncultured bacterium clone AH009-1 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AH009-1 putative proteorhodopsin gene, partial cds. EU915958 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTTGCCGCTACTGTTTTCTTCTTTCTTGAAAGAGACCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTTTGGGTTGGCGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTTGTCTTTGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATACATCATCTACGAGGTTTTTGCAGGTGAGGCAAGCAAGGCAAGTGCTGGTAGTGGGAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTAGGATGGGCAATTTAT MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTTTTCTTCTTTCTTGAAAGAGACCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTTTGGGTT---------------------------------------------------------GGCGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTTGTCTTTGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATACATCATCTACGAGGTT---------------TTT------GCA---GGTGAGGCAAGCAAGGCAAGTGCTGGT------AGT---GGGAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGATGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_1112700288665 [IV-Alpha7-HOT2C01] JCVI_ORF_1112700288665_GS109_Open_Ocean_2m jcvi|1112700288665| 1112700288665 JCVI ORF 1112700288665 1112700288665 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 05-AUG-2005 Open_Ocean/2m_depth/S_32.6_psu/GS109/Indian_Ocean/Indian_Ocean Indian Ocean marine -10.943611 92.05889 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATTAAGGGGAAAATAAACATGAAAGTATTAATGCTAAATCCCGGAGATCACGTTGCGATTTCGTTTTGGTTGATCTCTATGGCCATGGTTGCCGCTACTGCTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGCGACTCACCAACAGTTCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTTCAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGATGGGCAATTTATCCAATAGGTTATGCTGTAGGTTACTTCGGTGGCGGCGTTGACGCTGGTTCATTGAACTTAATCTATAACCTTGCAGACTTTGTTAATAAAATTGCATTTGGTATGGCTATTTATGTAGCTGCAGTATCAGACAGCAAC IKGKINMKVLMLNPGDHVAISFWLISMAMVAATAFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYPIGYAVGYFGGGVDAGSLNLIYNLADFVNKIAFGMAIYVAAVSDSN ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAAGGGGAAAATAAACATGAAAGTATTAATGCTAAATCCCGGAGATCACGTTGCGATTTCGTTTTGGTTGATCTCTATGGCCATGGTTGCCGCTACTGCTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGCGACTCACCAACAGTTCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTTCAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGATGG---------GCAATTTATCCAATAGGTTATGCTGTAGGTTACTTCGGT---GGCGGC---------------------------GTTGACGCT---------GGTTCATTGAACTTAATCTATAACCTTGCAGACTTTGTTAATAAAATTGCATTTGGTATGGCTATTTATGTAGCTGCAGTATCAGAC---AGCAAC--------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------IKGKINMKVLMLNPGDHVAISFWLISMAMVAATAFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYPIGYAVGYFG-GG---------VDA---GSLNLIYNLADFVNKIAFGMAIYVAAVSD-SN--------------------------------------- [IV-Alpha7-HOT2C01]_EU915829 [IV-Alpha7-HOT2C01] PF12071_env_samples_EU915829 gi|229358540|gb|EU915829| Uncultured microorganism clone PF12071 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF12071 putative proteorhodopsin gene, partial cds EU915829 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; V108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na GTATTAGCGGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGTATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGTTGGGCGATCTAC VLAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVVFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGTATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGTTGG---------GCGATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------VLAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVVFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU916054 [IV-Alpha7-HOT2C01] clone_A150027_EU916054 gi|229358989|gb|EU916054| Uncultured bacterium clone A150027 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A150027 putative proteorhodopsin gene, partial cds. EU916054 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na GTATTAGCGGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAGGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGTTGGGCGATATAC VLAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKAGAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT---------------------------------------------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAGGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGTTGG---------GCGATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------VLAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKAGAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU916068 [IV-Alpha7-HOT2C01] clone_A150025_EU916068 gi|229359017|gb|EU916068| Uncultured bacterium clone A150025 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A150025 putative proteorhodopsin gene, partial cds. EU916068 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na GTATTAGCGGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCATTACTTCTACATGAGAGGCGTATGGGTTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTACGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAGCGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGCTGGGCGATCTAT VLAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIITLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGSAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCATTACTTCTACATGAGAGGCGTATGGGTT---------------------------------------------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTACGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAGCGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGCTGG---------GCGATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------VLAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIITLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GSAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ903143 [IV-Alpha7-HOT2C01] clone_A1S0112_DQ903143 gi|116294015|gb|DQ903143| Uncultured bacterium clone A1S0112 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A1S0112 putative proteorhodopsin gene, partial cds. DQ903143 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na South China Sea surface water (SCS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na GTATTAGCGTCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGCGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGTTGGGCAATCTACCCA VLASTVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGTCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGCGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGTTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------VLASTVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ903148 [IV-Alpha7-HOT2C01] clone_A1S0117_DQ903148 gi|116294025|gb|DQ903148| Uncultured bacterium clone A1S0117 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A1S0117 putative proteorhodopsin gene, partial cds. DQ903148 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na South China Sea surface water (SCS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na GTATTAGCGTCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGCGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGTTGGGCTATCTACCCA VLASTVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGTCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGCGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGTTGG---------GCTATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------VLASTVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915783 [IV-Alpha7-HOT2C01] PF97540_env_samples_EU915783 gi|229358448|gb|EU915783| Uncultured microorganism clone PF97540 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF97540 putative proteorhodopsin gene, partial cds EU915783 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na GTATTAGCGGCTACTGTATTCTTCTTTCCTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGGTGGGCTATCTAC VLAATVFFFPERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGGCTACTGTATTCTTCTTTCCTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGGTGG---------GCTATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------VLAATVFFFPERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915806 [IV-Alpha7-HOT2C01] PF92009_env_samples_EU915806 gi|229358494|gb|EU915806| Uncultured microorganism clone PF92009 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF92009 putative proteorhodopsin gene, partial cds EU915806 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTATTAGCGTCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGGTGGGCTATCTAC LLASTVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGTCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGGTGG---------GCTATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------LLASTVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU916063 [IV-Alpha7-HOT2C01] clone_A150063_EU916063 gi|229359007|gb|EU916063| Uncultured bacterium clone A150063 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A150063 putative proteorhodopsin gene, partial cds. EU916063 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTATTAGCGTCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGGTGGGCTATCTAC LLASTVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGTCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT---------------------------------------------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGGTGG---------GCTATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------LLASTVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ903140 [IV-Alpha7-HOT2C01] clone_A1S0109_DQ903140 gi|116294009|gb|DQ903140| Uncultured bacterium clone A1S0109 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A1S0109 putative proteorhodopsin gene, partial cds. DQ903140 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na South China Sea surface water (SCS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na CTATTAGCGGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGGTGGGCAATCTATCCA LLAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGGTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ903123 [IV-Alpha7-HOT2C01] clone_A1S0013_DQ903123 gi|116293975|gb|DQ903123| Uncultured bacterium clone A1S0013 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A1S0013 putative proteorhodopsin gene, partial cds. DQ903123 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na South China Sea surface water (SCS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na GTATTAGCGGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTGATCCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGGTGGGCTATCTACCCA VLAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTGATCCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGGTGG---------GCTATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------VLAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915754 [IV-Alpha7-HOT2C01] PF75099_env_samples_EU915754 gi|229358390|gb|EU915754| Uncultured microorganism clone PF75099 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF75099 putative proteorhodopsin gene, partial cds EU915754 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTATTAGCGGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAGAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGGTGGGCTATATAC LLAATVFFFLERDRVAAKWRTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAGAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGGTGG---------GCTATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFLERDRVAA-KWRTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915756 [IV-Alpha7-HOT2C01] PF75106_env_samples_EU915756 gi|229358394|gb|EU915756| Uncultured microorganism clone PF75106 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF75106 putative proteorhodopsin gene, partial cds EU915756 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTATTAGCGGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAGAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGGTGGGCTATATAC LLAATVFFFLERDRVAAKWRTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAGAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGGTGG---------GCTATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFLERDRVAA-KWRTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915808 [IV-Alpha7-HOT2C01] PF92012_env_samples_EU915808 gi|229358498|gb|EU915808| Uncultured microorganism clone PF92012 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF92012 putative proteorhodopsin gene, partial cds EU915808 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTATTAGCGGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGAGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGTTGGGCCATATAC LLAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITEPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGAGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGTTGG---------GCCATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITEPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU916057 [IV-Alpha7-HOT2C01] clone_A150040_EU916057 gi|229358995|gb|EU916057| Uncultured bacterium clone A150040 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A150040 putative proteorhodopsin gene, partial cds. EU916057 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na GTATTAGCGGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAACGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTTATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGGTGGGCAATATAC VLAATVFFFLERDRVAAKRKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWFITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAACGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT---------------------------------------------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTTATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGGTGG---------GCAATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------VLAATVFFFLERDRVAA-KRKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------FITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ903145 [IV-Alpha7-HOT2C01] clone_A1S0114_DQ903145 gi|116294019|gb|DQ903145| Uncultured bacterium clone A1S0114 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A1S0114 putative proteorhodopsin gene, partial cds. DQ903145 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na South China Sea surface water (SCS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na GTATTAGCGGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAACCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGGTGGGCAATATACCCA VLAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASNLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AACCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGGTGG---------GCAATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------VLAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-NL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915787 [IV-Alpha7-HOT2C01] PF97545_env_samples_EU915787 gi|229358456|gb|EU915787| Uncultured microorganism clone PF97545 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF97545 putative proteorhodopsin gene, partial cds EU915787 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na GTATTAGCGGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGGTGGGCTATTTAC VLAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGGTGG---------GCTATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------VLAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915741 [IV-Alpha7-HOT2C01] PF75032_env_samples_EU915741 gi|229358364|gb|EU915741| Uncultured microorganism clone PF75032 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF75032 putative proteorhodopsin gene, partial cds EU915741 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTATTAGCGGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCCAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGCTACAGTAGGCTGGGCGATTTAC LLAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIATVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCC---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGCTACAGTA---------------------------------------------------------------GGCTGG---------GCGATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIATV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915816 [IV-Alpha7-HOT2C01] PF92052_env_samples_EU915816 gi|229358514|gb|EU915816| Uncultured microorganism clone PF92052 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF92052 putative proteorhodopsin gene, partial cds EU915816 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTATTAGCGTCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATAGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCGAGTGCTGGTAGTGGAAACGCTGCTGGCCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGGTGGGCGATTTAC LLASTVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGIAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGTCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATAGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCGAGTGCTGGT------AGT---GGAAACGCTGCTGGC---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGGTGG---------GCGATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------LLASTVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGIAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915805 [IV-Alpha7-HOT2C01] PF92008_env_samples_EU915805 gi|229358492|gb|EU915805| Uncultured microorganism clone PF92008 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF92008 putative proteorhodopsin gene, partial cds EU915805 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na GTATTAGCGGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGCTACAGTCGGGTGGGCCATTTAT VLAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIATVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGCTACAGTC---------------------------------------------------------------GGGTGG---------GCCATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------VLAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIATV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915810 [IV-Alpha7-HOT2C01] PF92014_env_samples_EU915810 gi|229358502|gb|EU915810| Uncultured microorganism clone PF92014 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF92014 putative proteorhodopsin gene, partial cds EU915810 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na GTATTAGCGGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGATGGGCCATTTAC VLAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGATGG---------GCCATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------VLAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915788 [IV-Alpha7-HOT2C01] PF97502_env_samples_EU915788 gi|229358458|gb|EU915788| Uncultured microorganism clone PF97502 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF97502 putative proteorhodopsin gene, partial cds EU915788 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTATTAGCGGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGATGGGCCATTTAC LLAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGATGG---------GCCATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915819 [IV-Alpha7-HOT2C01] PF12043_env_samples_EU915819 gi|229358520|gb|EU915819| Uncultured microorganism clone PF12043 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF12043 putative proteorhodopsin gene, partial cds EU915819 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTATTAGCGGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGTTGGGCGATTTAT LLAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGTTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU916066 [IV-Alpha7-HOT2C01] clone_A150071_EU916066 gi|229359013|gb|EU916066| Uncultured bacterium clone A150071 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A150071 putative proteorhodopsin gene, partial cds. EU916066 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTATTAGCGGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTACCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGATGGGCGATTTAT LLAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT---------------------------------------------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTACCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGATGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU916061 [IV-Alpha7-HOT2C01] clone_A150057_EU916061 gi|229359003|gb|EU916061| Uncultured bacterium clone A150057 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A150057 putative proteorhodopsin gene, partial cds. EU916061 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTATTAGCGGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGATGGGCAATTTAC LLAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT---------------------------------------------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGATGG---------GCAATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915801 [IV-Alpha7-HOT2C01] PF92077_env_samples_EU915801 gi|229358484|gb|EU915801| Uncultured microorganism clone PF92077 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF92077 putative proteorhodopsin gene, partial cds EU915801 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTATTAGCGGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTTGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCCGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGGTGGGCGATTTAC LLAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLCYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTTGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCCGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGGTGG---------GCGATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLCYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU916055 [IV-Alpha7-HOT2C01] clone_A150028_EU916055 gi|229358991|gb|EU916055| Uncultured bacterium clone A150028 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A150028 putative proteorhodopsin gene, partial cds. EU916055 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTATTAGCGGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTACTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAAGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGGTGGGCGATCTAC LLAATVFFFLERDRVAAKWKTSLTVAGLVTGTAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFASEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTACTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT---------------------------------------------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---AGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGGTGG---------GCGATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFLERDRVAA-KWKTSLTVAGLVTGTAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-SEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU916056 [IV-Alpha7-HOT2C01] clone_A150029_EU916056 gi|229358993|gb|EU916056| Uncultured bacterium clone A150029 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A150029 putative proteorhodopsin gene, partial cds. EU916056 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTATTAGCGGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGGTGGGCGATTTAT LLAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT---------------------------------------------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGGTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU916064 [IV-Alpha7-HOT2C01] clone_A150064_EU916064 gi|229359009|gb|EU916064| Uncultured bacterium clone A150064 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A150064 putative proteorhodopsin gene, partial cds. EU916064 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTATTAGCGGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGGTGGGCCATTTAC LLAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT---------------------------------------------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGGTGG---------GCCATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915937 [IV-Alpha7-HOT2C01] clone_A-H001-9_EU915937 gi|229358756|gb|EU915937| Uncultured bacterium clone A-H001-9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A-H001-9 putative proteorhodopsin gene, partial cds. EU915937 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTCGCCGCTACTGTTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGGTGACTCACCAACTGTCCTTCGTTACATTGACTGGTCGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGTTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTTGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGATGGGCAATTTAT MLAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWSITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMFVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTCGCCGCTACTGTTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT---------------------------------------------------------GGTGACTCACCAACTGTCCTTCGTTACATTGACTGG------------------------TCGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGTTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTTGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGATGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------SITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMFVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915952 [IV-Alpha7-HOT2C01] clone_AH015-6_EU915952 gi|229358786|gb|EU915952| Uncultured bacterium clone AH015-6 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AH015-6 putative proteorhodopsin gene, partial cds. EU915952 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTGGCCGCTACTGTTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACCGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGGTGACTCACCAACGGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTTCAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTATCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGATGGGCAATTTAT MLAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLSFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGTTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACCGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT---------------------------------------------------------GGTGACTCACCAACGGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTTCAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTATCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGATGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLS-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU916150 [IV-Alpha7-HOT2C01] clone_2M-12_EU916150 gi|229359174|gb|EU916150| Uncultured bacterium clone 2M-12 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 2M-12 putative proteorhodopsin gene, partial cds. EU916150 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTAGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGGTGACTCACCAACTGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGATGGGCAATTTAT MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT---------------------------------------------------------GGTGACTCACCAACTGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGATGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EF100796 [IV-Alpha7-HOT2C01] clone_ID29016_EF100796 gi|126513371|gb|EF100796| Uncultured bacterium clone ID29016 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID29016 putative proteorhodopsin gene, partial cds. EF100796 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-nov-07 #na surface water Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGCTGGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGACCGTGTAGCTGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACGGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGATGGGCCATCTATCCA MLAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGACCGTGTAGCTGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACG---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGATGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EF100795 [IV-Alpha7-HOT2C01] clone_ID29015_EF100795 gi|126513369|gb|EF100795| Uncultured bacterium clone ID29015 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID29015 putative proteorhodopsin gene, partial cds. EF100795 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-nov-07 #na surface water Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGCTGGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCCACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAATGCTGCTGGTCAAACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGGTGGGCAATCTATCCA MLAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCCACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAATGCTGCTGGT---CAA---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGGTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EF079853 [IV-Alpha7-HOT2C01] clone_ID11033_EF079853 gi|126361795|gb|EF079853| Uncultured bacterium clone ID11033 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID11033 putative proteorhodopsin gene, partial cds. EF079853 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na #na Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGGTGGCCGCTACTGCGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGGAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTTCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTTCAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAGGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGTTGGGCCATATACCCA MVAATAFFFLERDRVAAKWETSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGGAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTTCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTTCAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAGGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGTTGG---------GCCATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLERDRVAA-KWETSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EF079862 [IV-Alpha7-HOT2C01] clone_ID11063_EF079862 gi|126361813|gb|EF079862| Uncultured bacterium clone ID11063 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID11063 putative proteorhodopsin gene, partial cds. EF079862 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na #na Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGCTCGCCGCTACTGCGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTTCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTTCAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAGGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGATGGGCAATTTACCCA MLAATAFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTCGCCGCTACTGCGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTTCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTTCAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAGGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGATGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ927025 [IV-Alpha7-HOT2C01] clone_AT06019_DQ927025 gi|116294165|gb|DQ927025| Uncultured bacterium clone AT06019 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT06019 putative proteorhodopsin gene, partial cds. DQ927025 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGGTGGCCGCTACGGCTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTATATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTTCTTCGTTACATCGACTGGTTGATTACTGTGCCTCTTCAAATTGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTATTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTTGGATGGGCAATCTACCCA MVAATAFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACGGCTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTATATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTTCTTCGTTACATCGACTGG------------------------TTGATTACTGTGCCTCTTCAAATTGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTT---------------------------------------------------------------GGATGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EF100808 [IV-Alpha7-HOT2C01] clone_ID29054_EF100808 gi|126513395|gb|EF100808| Uncultured bacterium clone ID29054 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID29054 putative proteorhodopsin gene, partial cds. EF100808 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-nov-07 #na surface water Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGCTCGCCGCTACTGTTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCTATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGATTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTGACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGATGGGCCATCTACCCA MLAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTCGCCGCTACTGTTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCT---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---TTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTG------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGATGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EF100788 [IV-Alpha7-HOT2C01] clone_ID29006_EF100788 gi|126513355|gb|EF100788| Uncultured bacterium clone ID29006 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID29006 putative proteorhodopsin gene, partial cds. EF100788 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-nov-07 #na surface water Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGCTTGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTGCAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCAGTTGCTTCAGGCCTTTTCTGGAGACTATTAACTGCATCAATTATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTGCGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAATGCTGCTGGTCAGACTGCATTTAACGCATTGAGTTTAATTGTTACAGTAGGATGGGCAATCTACCCA MLAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLTASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIICEVFAGEASKASAGSGNAAGQTAFNALSLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTGCAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCAGTTGCTTCA---GGCCTT------------------------------------TTCTGGAGA---CTATTAACTGCATCAATTATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTGCGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAATGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGTTTAATTGTTACAGTA---------------------------------------------------------------GGATGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLTASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIICEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-SLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EF100804 [IV-Alpha7-HOT2C01] clone_ID29030_EF100804 gi|126513387|gb|EF100804| Uncultured bacterium clone ID29030 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID29030 putative proteorhodopsin gene, partial cds. EF100804 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-nov-07 #na surface water Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGCTTGCCGCTACTGTTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGTAAGGCAAGTGCTGGTAGTGGAAACGCTGCCGGTCAGACAGCATTTAACGCATTGAGTTTAATTGTTACAGTCGGTTGGGCTATCTACCCA MLAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALSLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACTGTTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGTAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCCGGT---CAG---ACA---GCA---TTT---AAC---GCATTG---AGTTTAATTGTTACAGTC---------------------------------------------------------------GGTTGG---------GCTATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-SLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915776 [IV-Alpha7-HOT2C01] PF97520_env_samples_EU915776 gi|229358434|gb|EU915776| Uncultured microorganism clone PF97520 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF97520 putative proteorhodopsin gene, partial cds EU915776 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTTGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGATGGGCAATCTAC MLAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGATGG---------GCAATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915833 [IV-Alpha7-HOT2C01] PF12004_env_samples_EU915833 gi|229358548|gb|EU915833| Uncultured microorganism clone PF12004 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF12004 putative proteorhodopsin gene, partial cds EU915833 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTAGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCGGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGTTGGGCAATCTAC MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGRTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CGG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGTTGG---------GCAATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-R-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915843 [IV-Alpha7-HOT2C01] PF12038_env_samples_EU915843 gi|229358568|gb|EU915843| Uncultured microorganism clone PF12038 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF12038 putative proteorhodopsin gene, partial cds EU915843 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTCGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGATGGGCAATTTAC MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGATGG---------GCAATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915838 [IV-Alpha7-HOT2C01] PF12023_env_samples_EU915838 gi|229358558|gb|EU915838| Uncultured microorganism clone PF12023 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF12023 putative proteorhodopsin gene, partial cds EU915838 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTCGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTGCATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGGTGGGCAATATAT MLAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGCMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTCGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTGCATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGGTGG---------GCAATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGCMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915780 [IV-Alpha7-HOT2C01] PF97531_env_samples_EU915780 gi|229358442|gb|EU915780| Uncultured microorganism clone PF97531 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF97531 putative proteorhodopsin gene, partial cds EU915780 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGCGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGGTGGGCAATCTAC MVAATAFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGGTGG---------GCAATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915822 [IV-Alpha7-HOT2C01] PF12049_env_samples_EU915822 gi|229358526|gb|EU915822| Uncultured microorganism clone PF12049 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF12049 putative proteorhodopsin gene, partial cds EU915822 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTCGCCGCTACTGTTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGGTGGGCTATCTAC MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCCGCTACTGTTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGGTGG---------GCTATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915828 [IV-Alpha7-HOT2C01] PF12062_env_samples_EU915828 gi|229358538|gb|EU915828| Uncultured microorganism clone PF12062 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF12062 putative proteorhodopsin gene, partial cds EU915828 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGGTGGGCTATCTAC MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGGTGG---------GCTATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915799 [IV-Alpha7-HOT2C01] PF92069_env_samples_EU915799 gi|229358480|gb|EU915799| Uncultured microorganism clone PF92069 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF92069 putative proteorhodopsin gene, partial cds EU915799 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTGGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGCAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGGTGGGCGATCTAC MLAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYAILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGCAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGGTGG---------GCGATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYAILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ926996 [IV-Alpha7-HOT2C01] clone_PF91116_DQ926996 gi|116294107|gb|DQ926996| Uncultured bacterium clone PF91116 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF91116 putative proteorhodopsin gene, partial cds. DQ926996 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGGTAGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGGTGGGCCATCTACCCA MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGGTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915817 [IV-Alpha7-HOT2C01] PF92054_env_samples_EU915817 gi|229358516|gb|EU915817| Uncultured microorganism clone PF92054 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF92054 putative proteorhodopsin gene, partial cds EU915817 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTGGCCGCTACTGTTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTCCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTACGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGCTGGGCGATATAC MLAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYSYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGTTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTCCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTACGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGCTGG---------GCGATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYSYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915841 [IV-Alpha7-HOT2C01] PF12035_env_samples_EU915841 gi|229358564|gb|EU915841| Uncultured microorganism clone PF12035 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF12035 putative proteorhodopsin gene, partial cds EU915841 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTCGCCGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACCGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAGGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGCTGGGCTATTTAC MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCCGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACC---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---GGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGCTGG---------GCTATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU916132 [IV-Alpha7-HOT2C01] clone_2M-31_EU916132 gi|229359138|gb|EU916132| Uncultured bacterium clone 2M-31 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 2M-31 putative proteorhodopsin gene, partial cds. EU916132 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGTTTTCTTCTTTCTTGAGAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTAGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTTTGGGTTGGTGACTCACCAACAGTCCTACGTTATATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGTTTTTGCAGGTGAAGCAAGCAAAGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTTGGATGGGCAATTTAT MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTTTTCTTCTTTCTTGAGAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTAGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTTTGGGTT---------------------------------------------------------GGTGACTCACCAACAGTCCTACGTTATATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAAGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTT---------------------------------------------------------------GGATGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU916077 [IV-Alpha7-HOT2C01] clone_A150009_EU916077 gi|229359035|gb|EU916077| Uncultured bacterium clone A150009 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A150009 putative proteorhodopsin gene, partial cds. EU916077 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGTATTCTTCTTTCTTGAAGGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTCTAGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCGGCGATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGGTGGGCCATTTAT MVAATVFFFLEGDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTATTCTTCTTTCTTGAAGGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTCTAGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT---------------------------------------------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCGGCG---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGGTGG---------GCCATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLEGDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU916135 [IV-Alpha7-HOT2C01] clone_2M-3_EU916135 gi|229359144|gb|EU916135| Uncultured bacterium clone 2M-3 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 2M-3 putative proteorhodopsin gene, partial cds. EU916135 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTAGCCGCTACTGTTTTCTTCTTTCTTGAAAGAGACCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTAGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCAATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGATGGGCAATTTAT MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTTTTCTTCTTTCTTGAAAGAGACCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTAGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT---------------------------------------------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCA---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGATGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU916072 [IV-Alpha7-HOT2C01] clone_A150004_EU916072 gi|229359025|gb|EU916072| Uncultured bacterium clone A150004 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A150004 putative proteorhodopsin gene, partial cds. EU916072 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGTATTCTTCTTTCTTGAAAGAGACCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGATGGGCAATTTAT MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTATTCTTCTTTCTTGAAAGAGACCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT---------------------------------------------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGATGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ927027 [IV-Alpha7-HOT2C01] clone_AT06021_DQ927027 gi|116294169|gb|DQ927027| Uncultured bacterium clone AT06021 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT06021 putative proteorhodopsin gene, partial cds. DQ927027 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na AGGGTGGCCGCTCCGGTCTTCTGCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTAACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTAATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCTAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGATGGGCTATTTACCCA RVAAPVFCFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGGTGGCCGCTCCGGTCTTCTGCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTAACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTAATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCTAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGATGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------RVAAPVFCFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EF100786 [IV-Alpha7-HOT2C01] clone_ID29003_EF100786 gi|126513351|gb|EF100786| Uncultured bacterium clone ID29003 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID29003 putative proteorhodopsin gene, partial cds. EF100786 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-nov-07 #na surface water Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGGTCGCCGCTACTGTATTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTAGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGTGTATGGGTTGCTACTGGTGACTCTCCAACAGTCCTACGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTTGTCTTCGGTCACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCTAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGATGGGCTATCTACCCA MVAATVFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGHMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCCGCTACTGTA---TTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTAGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGTGTATGGGTT------------------------------GCTACT---------------------GGTGACTCTCCAACAGTCCTACGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTTGTCTTCGGTCACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCTAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGATGG---------GCTATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATV-FFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGHMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU079177 [IV-Alpha7-HOT2C01] NASB_21_env_samples_EU079177 gi|156106514|gb|EU079177| Uncultured organism clone NASB 21 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 21 putative proteorhodopsin gene, partial cds EU079177 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGTTATATTGACTGGTTGATTACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTGTTAATTGCATCAATAATTATGCTTGTCTTCGGTTATATGGGTGAAACTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTGATTGTTACAGTAGGGTGGGCAATTTAC RYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTATATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAATTATGCTTGTCTTCGGTTATATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTGATTGTTACAGTA---------------------------------------------------------------GGGTGG---------GCAATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU079194 [IV-Alpha7-HOT2C01] NASB_45_env_samples_EU079194 gi|156106548|gb|EU079194| Uncultured organism clone NASB 45 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 45 putative proteorhodopsin gene, partial cds EU079194 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGTTACGTTGACTGGTTGATTACTGTGCCTCTACAAATTGTAGAATTCTCTGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTGTTAATTGCATCAATAATTATGCTTGTCTTCGGTTATATGGGTGAAACTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGTTTCTGCAGGTGAGGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTGATTGTTACAGTAGGATGGGCAATATAC RYVDWLITVPLQIVEFSVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVSAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTACGTTGACTGG------------------------TTGATTACTGTGCCTCTACAAATTGTAGAATTCTCTGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAATTATGCTTGTCTTCGGTTATATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGTT---------------TCT------GCA---GGTGAGGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTGATTGTTACAGTA---------------------------------------------------------------GGATGG---------GCAATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LITVPLQIVEFSVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----S--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915728 [IV-Alpha7-HOT2C01] APF9057_env_samples_EU915728 gi|229358338|gb|EU915728| Uncultured microorganism clone APF9057 putative proteorhodopsin gene, partial cds Uncultured microorganism clone APF9057 putative proteorhodopsin gene, partial cds EU915728 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample_at_75_m_depth Atlantic Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACGGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTGTTAATTGCATCAATTATTATGCTTGTCTTCGGTTATATGGGTGAAACTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGATGGGCTATTTAC MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACGGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATTATTATGCTTGTCTTCGGTTATATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGATGG---------GCTATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EF088521 [IV-Alpha7-HOT2C01] clone_APF9057_EF088521 gi|126843259|gb|EF088521| Uncultured bacterium clone APF9057 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone APF9057 putative proteorhodopsin gene, partial cds. EF088521 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na 75m water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTGGCCGCTACGGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTGTTAATTGCATCAATTATTATGCTTGTCTTCGGTTATATGGGTGAAACTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGATGGGCTATTTACCCA MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACGGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATTATTATGCTTGTCTTCGGTTATATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGATGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU916140 [IV-Alpha7-HOT2C01] clone_a-xm-14_EU916140 gi|229359154|gb|EU916140| Uncultured bacterium clone a-xm-14 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone a-xm-14 putative proteorhodopsin gene, partial cds. EU916140 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGGTGACTCACCAACAGGCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTCGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACCGCATTTAACGCATTGAGATTAATTGTTACAGTAGGATGGGCAATTTAT MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTGLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT---------------------------------------------------------GGTGACTCACCAACAGGCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTCGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACC---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGATGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTGLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU916147 [IV-Alpha7-HOT2C01] clone_a-xm-30_EU916147 gi|229359168|gb|EU916147| Uncultured bacterium clone a-xm-30 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone a-xm-30 putative proteorhodopsin gene, partial cds. EU916147 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTCGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTCACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACCGCATTTAACGCATTGAGATTAATTGTTACAGTAGGATGGGCAATTTAT MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGHMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT---------------------------------------------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTCGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTCACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACC---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGATGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGHMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU916134 [IV-Alpha7-HOT2C01] clone_2M-1_EU916134 gi|229359142|gb|EU916134| Uncultured bacterium clone 2M-1 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 2M-1 putative proteorhodopsin gene, partial cds. EU916134 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGTTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTTGCTTCAAGCCTTTTCTGGAGATTATTAATTGCATCAATCATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTTGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAATGCTGCTGGTCAAACTGCATTTAACGCATTGAGATTAATTGTTACAGTAGGATGGGCAATTTAT MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT---------------------------------------------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---TTATTAATTGCATCAATCATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTTGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAATGCTGCTGGT---CAA---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGATGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915963 [IV-Alpha7-HOT2C01] clone_A-H009-5_EU915963 gi|229358808|gb|EU915963| Uncultured bacterium clone A-H009-5 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A-H009-5 putative proteorhodopsin gene, partial cds. EU915963 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na GTGGCCGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTCGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTCATAGGTATGGCTGGATGGTTATATATCATCTACGAGGCTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTAGGATGGGCAATTTAT VAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEAFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGGCCGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTC---------------------------------------------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTCATAGGTATGGCTGGATGGTTATATATCATCTACGAGGCT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGATGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------VAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEA-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915959 [IV-Alpha7-HOT2C01] clone_AH009-2_EU915959 gi|229358800|gb|EU915959| Uncultured bacterium clone AH009-2 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AH009-2 putative proteorhodopsin gene, partial cds. EU915959 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTAGCCGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCCGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTCGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGCCATAGGTATGGCTGGATGGTTATATATCATCTACGAGGCTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTAGGATGGGCAATTTAT MLAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFAIGMAGWLYIIYEAFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTAGCCGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCCGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTC---------------------------------------------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGCCATAGGTATGGCTGGATGGTTATATATCATCTACGAGGCT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGATGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FAIGMAGWLYIIYEA-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU916085 [IV-Alpha7-HOT2C01] clone_A150038_EU916085 gi|229359051|gb|EU916085| Uncultured bacterium clone A150038 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A150038 putative proteorhodopsin gene, partial cds. EU916085 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTTGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTAGGATGGGCAATTTAT MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT---------------------------------------------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGATGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU916086 [IV-Alpha7-HOT2C01] clone_A150039_EU916086 gi|229359053|gb|EU916086| Uncultured bacterium clone A150039 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A150039 putative proteorhodopsin gene, partial cds. EU916086 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTTGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTAGGATGGGCAATTTAT MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT---------------------------------------------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGATGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU916069 [IV-Alpha7-HOT2C01] clone_A150001_EU916069 gi|229359019|gb|EU916069| Uncultured bacterium clone A150001 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A150001 putative proteorhodopsin gene, partial cds. EU916069 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTGGCCGCTACTGTCTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTTTTAATTGCATCAGTAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTAGGATGGGCAATTTAT MLAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASVIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGTCTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT---------------------------------------------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTTTTAATTGCATCAGTAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGATGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASVIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU916084 [IV-Alpha7-HOT2C01] clone_A150037_EU916084 gi|229359049|gb|EU916084| Uncultured bacterium clone A150037 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A150037 putative proteorhodopsin gene, partial cds. EU916084 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTCGCCGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTAGGATGGGCAATTTAT MLAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTCGCCGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT---------------------------------------------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGATGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EF100803 [IV-Alpha7-HOT2C01] clone_ID29029_EF100803 gi|126513385|gb|EF100803| Uncultured bacterium clone ID29029 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID29029 putative proteorhodopsin gene, partial cds. EF100803 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-nov-07 #na surface water Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGGTGGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGCGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATTTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTGATTGTTACAGTAGGATGGGCTATTTACCCA MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGCGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATTTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTGATTGTTACAGTA---------------------------------------------------------------GGATGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915793 [IV-Alpha7-HOT2C01] PF92059_env_samples_EU915793 gi|229358468|gb|EU915793| Uncultured microorganism clone PF92059 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF92059 putative proteorhodopsin gene, partial cds EU915793 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTCTGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGCTGGGCTATATAC MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGLAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTCTGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGCTGG---------GCTATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGLAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ926992 [IV-Alpha7-HOT2C01] clone_PF91111_DQ926992 gi|116294099|gb|DQ926992| Uncultured bacterium clone PF91111 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF91111 putative proteorhodopsin gene, partial cds. DQ926992 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGGTGGCCGCTACTGTTTTCTTCTTTCTTGGAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACCTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGCTGGGCTATTTACCCA MVAATVFFFLGRDRVAAKWKTSLTVAGLVTGIAAWHYLYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTTTTCTTCTTTCTTGGAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACCTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGCTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLGRDRVAA-KWKTSLTVAGLVTGIAAWHYLYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU079193 [IV-Alpha7-HOT2C01] NASB_44_env_samples_EU079193 gi|156106546|gb|EU079193| Uncultured organism clone NASB 44 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 44 putative proteorhodopsin gene, partial cds EU079193 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGGTATGTTGACTGGCTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCTATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCCGGAAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCACTGAGATTAATTGCTACAGTAGGTTGGGCTATATAC RYVDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIATVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTATGTTGACTGG------------------------CTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCT---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCCGGA------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCACTG---AGATTAATTGCTACAGTA---------------------------------------------------------------GGTTGG---------GCTATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIATV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU079186 [IV-Alpha7-HOT2C01] NASB_4_env_samples_EU079186 gi|156106532|gb|EU079186| Uncultured organism clone NASB 4 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 4 putative proteorhodopsin gene, partial cds EU079186 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGCTACATCGATTGGCTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCTATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATTGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGTAGCAAGCAAGGCAAGTGCCGGAAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCACTGAGATTAATTGTTACAGTAGGATGGGCAATCTAC RYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGVASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTACATCGATTGG------------------------CTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCT---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATTGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGTAGCAAGCAAGGCAAGTGCCGGA------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCACTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGATGG---------GCAATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GVASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU079185 [IV-Alpha7-HOT2C01] NASB_2_env_samples_EU079185 gi|156106530|gb|EU079185| Uncultured organism clone NASB 2 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 2 putative proteorhodopsin gene, partial cds EU079185 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGCTACGTTGACTGGCTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCTATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTATATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACCGCATTTAACGCATTGAGATTAATTGTTACAGTAGGGTGGGCTATATAC RYVDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTACGTTGACTGG------------------------CTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCT---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTATATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACC---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGGTGG---------GCTATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU079183 [IV-Alpha7-HOT2C01] NASB_30_env_samples_EU079183 gi|156106526|gb|EU079183| Uncultured organism clone NASB 30 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 30 putative proteorhodopsin gene, partial cds EU079183 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGCTATGTTGACTGGCTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGAAATTCTTGCAGCTATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGCGGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTAGGCTGGGCGATTTAT RYVDWLITVPLQIVEFYEILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGGGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTATGTTGACTGG------------------------CTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGAAATTCTTGCAGCT---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGC------GGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGCTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LITVPLQIVEFYEILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--G-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915743 [IV-Alpha7-HOT2C01] PF75053_env_samples_EU915743 gi|229358368|gb|EU915743| Uncultured microorganism clone PF75053 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF75053 putative proteorhodopsin gene, partial cds EU915743 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTGGCCGCTACTGCATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTATATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTAGGCTGGGCCATCTAC MLAATAFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGCATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTATATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGCTGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ903130 [IV-Alpha7-HOT2C01] clone_A1S0031_DQ903130 gi|116293989|gb|DQ903130| Uncultured bacterium clone A1S0031 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A1S0031 putative proteorhodopsin gene, partial cds. DQ903130 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na South China Sea surface water (SCS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na ATGGTGGCCGCTACTGTTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAGACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTCGCTACTGGTGACCCACCAACAGTCCTTCGTTATATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTATATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGCAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTAGGCTGGGCAATTTACCCA MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDPPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAGACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTC------------------------------GCTACT---------------------GGTGACCCACCAACAGTCCTTCGTTATATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTATATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGC------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGCTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDPPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EF079836 [IV-Alpha7-HOT2C01] clone_ID11004_EF079836 gi|126361761|gb|EF079836| Uncultured bacterium clone ID11004 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID11004 putative proteorhodopsin gene, partial cds. EF079836 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na #na Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGGTTGCCGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTAGGCTGGGCAATTTACCCA MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGCTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ926990 [IV-Alpha7-HOT2C01] clone_PF91105_DQ926990 gi|116294095|gb|DQ926990| Uncultured bacterium clone PF91105 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF91105 putative proteorhodopsin gene, partial cds. DQ926990 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGGTTGCCGCTACTGTCTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGCTGGGCTATCTACCCA MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTCTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGCTGG---------GCTATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915834 [IV-Alpha7-HOT2C01] PF12006_env_samples_EU915834 gi|229358550|gb|EU915834| Uncultured microorganism clone PF12006 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF12006 putative proteorhodopsin gene, partial cds EU915834 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTAGCCGCTACTGTTTTCTTCTTCCTTGAGAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCCTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGGCTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGTTGGGCTATATAC MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVIPAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTTTTCTTCTTCCTTGAGAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCCTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---GCT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGTTGG---------GCTATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVIPAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915820 [IV-Alpha7-HOT2C01] PF12044_env_samples_EU915820 gi|229358522|gb|EU915820| Uncultured microorganism clone PF12044 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF12044 putative proteorhodopsin gene, partial cds EU915820 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTTGCCGCTACTGCATTCTTCTTCCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGGTGGGCCATATAC MVAATAFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGCATTCTTCTTCCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGGTGG---------GCCATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ926983 [IV-Alpha7-HOT2C01] clone_PF91001_DQ926983 gi|116294081|gb|DQ926983| Uncultured bacterium clone PF91001 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF91001 putative proteorhodopsin gene, partial cds. DQ926983 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGGTTGCCGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTGCATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAGGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCGGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGGTGGGCTATCTATCCA MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGCMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGRTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTGCATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAGGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CGG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGGTGG---------GCTATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGCMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-R-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ887798 [IV-Alpha7-HOT2C01] clone_PF10026_DQ887798 gi|116294296|gb|DQ887798| Uncultured bacterium clone PF10026 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF10026 putative proteorhodopsin gene, partial cds. DQ887798 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2007 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGGTTGCCGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGGTGGGCTATTTACCCA MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGGTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915815 [IV-Alpha7-HOT2C01] PF92040_env_samples_EU915815 gi|229358512|gb|EU915815| Uncultured microorganism clone PF92040 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF92040 putative proteorhodopsin gene, partial cds EU915815 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTTGCCGCTACTGCATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGGTGGGCGATTTAC MVAATAFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGCATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGGTGG---------GCGATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ926988 [IV-Alpha7-HOT2C01] clone_PF91101_DQ926988 gi|116294091|gb|DQ926988| Uncultured bacterium clone PF91101 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF91101 putative proteorhodopsin gene, partial cds. DQ926988 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGGTTGCCGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTCACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGATGGGCGATTTACCCA MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGHMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTCACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGATGG---------GCGATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGHMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ926993 [IV-Alpha7-HOT2C01] clone_PF91112_DQ926993 gi|116294101|gb|DQ926993| Uncultured bacterium clone PF91112 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF91112 putative proteorhodopsin gene, partial cds. DQ926993 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGGTGGCCGCTACTGTTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGGTGGGCCATTTACCCA MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGGTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ927010 [IV-Alpha7-HOT2C01] clone_PF91139_DQ927010 gi|116294135|gb|DQ927010| Uncultured bacterium clone PF91139 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF91139 putative proteorhodopsin gene, partial cds. DQ927010 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGGTAGCCGCTACTGCATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTAGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGCTGGGCCATCTACCCA MVAATAFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGCATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTAGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGCTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915779 [IV-Alpha7-HOT2C01] PF97523_env_samples_EU915779 gi|229358440|gb|EU915779| Uncultured microorganism clone PF97523 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF97523 putative proteorhodopsin gene, partial cds EU915779 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTTGCCGCTACTGCGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGTAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGGTGGGCCATTTAC MVAATAFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFVGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGCGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GTA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGGTGG---------GCCATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--V-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915832 [IV-Alpha7-HOT2C01] PF12092_env_samples_EU915832 gi|229358546|gb|EU915832| Uncultured microorganism clone PF12092 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF12092 putative proteorhodopsin gene, partial cds EU915832 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGCGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGGTGGGCCATTTAT MVAATAFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGGTGG---------GCCATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ203765 [IV-Alpha7-HOT2C01] SS114a0D8_env_samples_DQ203765 gi|77547978|gb|DQ203765| Uncultured bacterium clone SS114a0D8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0D8 predicted proteorhodopsin gene, partial cds DQ203765 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATACATAGACTGGCTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACAGCATTTAACGCATTGAGATTAATTGTTACAGTAGGGTGGGCCATATATCCA RYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATAGACTGG------------------------CTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACA---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ203778 [IV-Alpha7-HOT2C01] SS114a0F6_env_samples_DQ203778 gi|77548004|gb|DQ203778| Uncultured bacterium clone SS114a0F6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0F6 predicted proteorhodopsin gene, partial cds DQ203778 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATACATTGATTGGCTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACAGCATTTAACGCATTGAGATTAATTGTTACAGTAGGGTGGGCCATCTATCCA RYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATTGATTGG------------------------CTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACA---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU079174 [IV-Alpha7-HOT2C01] NASB_27_env_samples_EU079174 gi|156106508|gb|EU079174| Uncultured organism clone NASB 27 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 27 putative proteorhodopsin gene, partial cds EU079174 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGATTTGTTGATTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAGGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGTTGGGCCATATAT RFVDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKAGAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATTTGTTGATTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAGGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGTTGG---------GCCATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RFVDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKAGAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU916137 [IV-Alpha7-HOT2C01] clone_2M-6_EU916137 gi|229359148|gb|EU916137| Uncultured bacterium clone 2M-6 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 2M-6 putative proteorhodopsin gene, partial cds. EU916137 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTCGCCGCTACTGCATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTAGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGGTGACTCACCAACTGTCCTTCGTTACATTGACTGGTTGACTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGATGGGCAATTTAT MVAATAFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLTTVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCCGCTACTGCATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTAGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT---------------------------------------------------------GGTGACTCACCAACTGTCCTTCGTTACATTGACTGG------------------------TTGACTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGATGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LTTVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU916138 [IV-Alpha7-HOT2C01] clone_2M-8_EU916138 gi|229359150|gb|EU916138| Uncultured bacterium clone 2M-8 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 2M-8 putative proteorhodopsin gene, partial cds. EU916138 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na GCCGCTACTGTCTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAACACGTCCCTTACGGTAGCTGGTTTAGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGGTGACTCACCAACTGTCCTTCGTTACATTGACTGGTTGACTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGATGGGCAATTTAT AATVFFFLERDRVAAKWNTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLTTVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGCTACTGTCTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAACACGTCCCTTACGGTAGCTGGTTTAGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT---------------------------------------------------------GGTGACTCACCAACTGTCCTTCGTTACATTGACTGG------------------------TTGACTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGATGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------AATVFFFLERDRVAA-KWNTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LTTVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915962 [IV-Alpha7-HOT2C01] clone_A-H009-3_EU915962 gi|229358806|gb|EU915962| Uncultured bacterium clone A-H009-3 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A-H009-3 putative proteorhodopsin gene, partial cds. EU915962 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGCGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCCAAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCCGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAACTGCATTTAACGCTTTGGGATTGATTGTTACAGTCGGATGGGCAATTTAT MVAATAFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALGLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCC---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT---------------------------------------------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCCGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---ACT---GCA---TTT---AAC---GCTTTG---GGATTGATTGTTACAGTC---------------------------------------------------------------GGATGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-GLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU916144 [IV-Alpha7-HOT2C01] clone_a-xm-24_EU916144 gi|229359162|gb|EU916144| Uncultured bacterium clone a-xm-24 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone a-xm-24 putative proteorhodopsin gene, partial cds. EU916144 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTGGCCGCTACTGCCTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTATATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGATGGGCAATTTAT MLAATAFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGCCTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT---------------------------------------------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTATATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGATGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_1105163960674 [IV-Alpha7-HOT2C01] JCVI_ORF_1105163960674_GS000a_Open_Ocean_5m jcvi|1105163960674| 1105163960674 JCVI ORF 1105163960674 1105163960674 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 26-FEB-2003 Open_Ocean/5m_depth/S_36.7_psu/GS000a/Sargasso_Station_11/Sargasso_Sea Sargasso Sea marine 31.175 -64.32433 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATTCTCAAATATAAATTGCCTAATTTTTATAAAATTAGGGGGAAAATAAACATGAAAGTATTAATGCTAATTCCCGGAGATCACGTTGCGATTTCGTTTGGGTTGATCTCTATGGCCATGGTTGCCGCTACTGCTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTATATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGTAAGGCAAGTGCTGGTAGTGGAAATGCTGCTGGTCAGACAGCATTTAACGCATTGAGATTAATTGTTACAGTAGGATGGGCAATTTATCCAATTGGTTATGCTGTAGGTTACTTCGGTGGCGGCGTTGACGCTGGTTCATTGAACTTAATCTATAACCTTGCAGACTTTGTTAATAAAATTGCATTTGGTATGGCTATCTATGTAGCTGCAGTATCAGACAGCAAC ILKYKLPNFYKIRGKINMKVLMLIPGDHVAISFGLISMAMVAATAFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYPIGYAVGYFGGGVDAGSLNLIYNLADFVNKIAFGMAIYVAAVSDSN ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTCAAATATAAATTGCCTAATTTTTATAAAATTAGGGGGAAAATAAACATGAAAGTATTAATGCTAATTCCCGGAGATCACGTTGCGATTTCGTTTGGGTTGATCTCTATGGCCATGGTTGCCGCTACTGCTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTATATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGTAAGGCAAGTGCTGGT------AGT---GGAAATGCTGCTGGT---CAG---ACA---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGATGG---------GCAATTTATCCAATTGGTTATGCTGTAGGTTACTTCGGT---GGCGGC---------------------------GTTGACGCT---------GGTTCATTGAACTTAATCTATAACCTTGCAGACTTTGTTAATAAAATTGCATTTGGTATGGCTATCTATGTAGCTGCAGTATCAGAC---AGCAAC--------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------ILKYKLPNFYKIRGKINMKVLMLIPGDHVAISFGLISMAMVAATAFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYPIGYAVGYFG-GG---------VDA---GSLNLIYNLADFVNKIAFGMAIYVAAVSD-SN--------------------------------------- [IV-Alpha7-HOT2C01]_EU916136 [IV-Alpha7-HOT2C01] clone_2M-4_EU916136 gi|229359146|gb|EU916136| Uncultured bacterium clone 2M-4 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 2M-4 putative proteorhodopsin gene, partial cds. EU916136 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTAACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTATATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGTAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACAGCATTTAACGCATTGAGATTAATTGTTACAGTAGGATGGGCAATTTAC MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTAACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT---------------------------------------------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTATATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGTAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACA---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGATGG---------GCAATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EF088642 [IV-Alpha7-HOT2C01] PF13034_env_samples_EF088642 gi|126843534|gb|EF088642| Uncultured bacterium clone PF13034 putative proteorhodopsin gene, partial cds Uncultured bacterium clone PF13034 putative proteorhodopsin gene, partial cds EF088642 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na surface_water_sample Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTCGCCGCTACTGCATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGATTAGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCTATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTATATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACAGCATTTAACGCGTTGAGATTAATTGTTACAGTAGGATGGGCTATCTAT MVAATAFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCCGCTACTGCATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGATTAGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCT---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTATATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACA---GCA---TTT---AAC---GCGTTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGATGG---------GCTATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EF079849 [IV-Alpha7-HOT2C01] clone_ID11026_EF079849 gi|126361787|gb|EF079849| Uncultured bacterium clone ID11026 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID11026 putative proteorhodopsin gene, partial cds. EF079849 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na #na Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGGTAGCCGCTACTGCGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGATTAGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACAGGTGACTCACCAACAGTCCTTCGTTATATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTCGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGCTGGGCTATCTACCCA MVAATAFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGCGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGATTAGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACA---------------------GGTGACTCACCAACAGTCCTTCGTTATATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTCGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGCTGG---------GCTATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EF100813 [IV-Alpha7-HOT2C01] clone_ID29060_EF100813 gi|126513405|gb|EF100813| Uncultured bacterium clone ID29060 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID29060 putative proteorhodopsin gene, partial cds. EF100813 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-nov-07 #na surface water Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGGTAGTCGCTACTGTTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAGTGGAAAACGTCCCTTACAGTAGCTGGTTTAGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACAGGTGACTCACCAACAGTTCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCGAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTCGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGCTGGGCTATCTACCCA MVVATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGTCGCTACTGTTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAGTGGAAAACGTCCCTTACAGTAGCTGGTTTAGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACA---------------------GGTGACTCACCAACAGTTCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCG---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTCGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGCTGG---------GCTATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVVATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EF100797 [IV-Alpha7-HOT2C01] clone_ID29023_EF100797 gi|126513373|gb|EF100797| Uncultured bacterium clone ID29023 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID29023 putative proteorhodopsin gene, partial cds. EF100797 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-nov-07 #na surface water Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGGTGGCCGCTACTGCTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGATTAGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACAGGTGACTCACCAACAGTCCTTCGTTATATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTCGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGGTGGGCTATCTACCCA MVAATAFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGATTAGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACA---------------------GGTGACTCACCAACAGTCCTTCGTTATATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTCGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGGTGG---------GCTATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EF100807 [IV-Alpha7-HOT2C01] clone_ID29034_EF100807 gi|126513393|gb|EF100807| Uncultured bacterium clone ID29034 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID29034 putative proteorhodopsin gene, partial cds. EF100807 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-nov-07 #na surface water Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGCTAGCCGCTACTGCTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTATATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGGTGGGCTATCTACCCA MLAATAFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTAGCCGCTACTGCTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTATATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGGTGG---------GCTATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EF079834 [IV-Alpha7-HOT2C01] clone_ID11002_EF079834 gi|126361757|gb|EF079834| Uncultured bacterium clone ID11002 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID11002 putative proteorhodopsin gene, partial cds. EF079834 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na #na Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGCTAGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGATTAGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACAGGTGACTCACCAACAGTCCTTCGTTATATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTCGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGGTGGGCCATTTATCCA MLAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTAGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGATTAGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACA---------------------GGTGACTCACCAACAGTCCTTCGTTATATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTCGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU916070 [IV-Alpha7-HOT2C01] clone_A150002_EU916070 gi|229359021|gb|EU916070| Uncultured bacterium clone A150002 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A150002 putative proteorhodopsin gene, partial cds. EU916070 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTCGCCGCTACTGCGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGATTAGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGGTGACTCACCAACAGTCCTTCGTTATATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTCGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTGGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGATGGGCAATTTAT LAATAFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGGGNAAGQTAFNALRLIVTVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCGCCGCTACTGCGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGATTAGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT---------------------------------------------------------GGTGACTCACCAACAGTCCTTCGTTATATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTCGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------GGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGATGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LAATAFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--G-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_1105081310554 [IV-Alpha7-HOT2C01] JCVI_ORF_1105081310554 jcvi|1105081310554| 1105081310554 JCVI ORF 1105081310554 1105081310554 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 09-janv-04 Open_Ocean/2m_depth/S_35.8_psu/GS017/Yucatan_Channel/Caribbean_Sea Caribbean Sea marine 20.5225 -85.41361 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATTAAGGGGAAAATAAACATGAAAGTATTAATGCTAAATCCCGGAGATCACGTTGCGATTTCGTTTTGGTTGATCTCTATGGCCATGGTTGCCGCTACTGCTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGATTAGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACAGGTGACTCACCAACAGTCCTTCGTTATATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCGAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTCGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCTTTTAACGCATTGAGATTAATTGTTACAGTCGGATGGGCAATTTATCCAATCGGTTATGCTGTAGGTTACTTCGGTGGCGGCGTTGACGCTGGTTCA IKGKINMKVLMLNPGDHVAISFWLISMAMVAATAFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYPIGYAVGYFGGGVDAGS ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAAGGGGAAAATAAACATGAAAGTATTAATGCTAAATCCCGGAGATCACGTTGCGATTTCGTTTTGGTTGATCTCTATGGCCATGGTTGCCGCTACTGCTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGATTAGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACA---------------------GGTGACTCACCAACAGTCCTTCGTTATATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCG---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTCGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCT---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGATGG---------GCAATTTATCCAATCGGTTATGCTGTAGGTTACTTCGGT---GGCGGC---------------------------GTTGACGCT---------GGTTCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------IKGKINMKVLMLNPGDHVAISFWLISMAMVAATAFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYPIGYAVGYFG-GG---------VDA---GS--------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_1105104018160 [IV-Alpha7-HOT2C01] JCVI_ORF_1105104018160 jcvi|1105104018160| 1105104018160 JCVI ORF 1105104018160 1105104018160 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.22_0.8 other #na 26-FEB-2003 Open_Ocean/5m_depth/S_36.6_psu/GS000d/Sargasso_Station_13/Sargasso_Sea Sargasso Sea marine 31.175 -64.32433 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf CTGGTTGCCGCTACTGCTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGATTAGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACAGGTGACTCACCAACAGTCCTTCGTTATATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTCGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGATGGGCAATTTATCCAATCGGTTATGCTGTAGGTTACTTCGGTGGCGGCGTTGACGCTGGTTCATTGAACTTAATCTATAACCTTGCAGACTTTGTTAATAAAATTGCATTTGGTATGGCTATTTATGTAGCTGCAGTATCAGACAGCAAC LVAATAFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYPIGYAVGYFGGGVDAGSLNLIYNLADFVNKIAFGMAIYVAAVSDSN ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGGTTGCCGCTACTGCTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGATTAGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACA---------------------GGTGACTCACCAACAGTCCTTCGTTATATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTCGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGATGG---------GCAATTTATCCAATCGGTTATGCTGTAGGTTACTTCGGT---GGCGGC---------------------------GTTGACGCT---------GGTTCATTGAACTTAATCTATAACCTTGCAGACTTTGTTAATAAAATTGCATTTGGTATGGCTATTTATGTAGCTGCAGTATCAGAC---AGCAAC--------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------LVAATAFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYPIGYAVGYFG-GG---------VDA---GSLNLIYNLADFVNKIAFGMAIYVAAVSD-SN--------------------------------------- [IV-Alpha7-HOT2C01]_1105152710144 [IV-Alpha7-HOT2C01] JCVI_ORF_1105152710144_GS000a_Open_Ocean_5m jcvi|1105152710144| 1105152710144 JCVI ORF 1105152710144 1105152710144 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 26-FEB-2003 Open_Ocean/5m_depth/S_36.7_psu/GS000a/Sargasso_Station_11/Sargasso_Sea Sargasso Sea marine 31.175 -64.32433 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TTGCCTATTTTTATAAAATTAGGGGGAAATAAACATGAAAGTATTAATGCTAAATCCCGGAGATCACGTTGCGATTTCGTTTTGTTGATCTCTATGGCCATGGTTGCCGCTACTGCTTTCCTCTTTCTGGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGTGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTATATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCTATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCTATTATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGATGGGCAATTTATCCAATCGGTTATGCTGTAGGTTACTTCGGTGGCGGCGTTGACGCTGGTTCATTGAACTTAATCTATAACCTTGCAGACTTTGTTAATAAAATTGCATTTGGTATGGCTATTTATGTAGCTGCAGTATCAGACAGCAAC LPIFIKLGGNKHESINAKSRRSRCDFVLLISMAMVAATAFLFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYPIGYAVGYFGGGVDAGSLNLIYNLADFVNKIAFGMAIYVAAVSDSN ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCCTATTTTTATAAAATTAGGGGGAAATAAACATGAAAGTATTAATGCTAAATCCCGGAGATCACGTTGCGATTTCGTTTTGTTGATCTCTATGGCCATGGTTGCCGCTACTGCTTTCCTCTTTCTGGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGTGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTATATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCT---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCTATTATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGATGG---------GCAATTTATCCAATCGGTTATGCTGTAGGTTACTTCGGT---GGCGGC---------------------------GTTGACGCT---------GGTTCATTGAACTTAATCTATAACCTTGCAGACTTTGTTAATAAAATTGCATTTGGTATGGCTATTTATGTAGCTGCAGTATCAGAC---AGCAAC--------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------LPIFIKLGGNKHESINAKSRRSRCDFVLLISMAMVAATAFLFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYPIGYAVGYFG-GG---------VDA---GSLNLIYNLADFVNKIAFGMAIYVAAVSD-SN--------------------------------------- [IV-Alpha7-HOT2C01]_1105112419598 [IV-Alpha7-HOT2C01] JCVI_ORF_1105112419598_GS000a_Open_Ocean_5m jcvi|1105112419598| 1105112419598 JCVI ORF 1105112419598 1105112419598 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 26-FEB-2003 Open_Ocean/5m_depth/S_36.7_psu/GS000a/Sargasso_Station_11/Sargasso_Sea Sargasso Sea marine 31.175 -64.32433 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATTAAGGGGAAAATAAACATGAAAGTATTAATGCTAAATCCCGGAGATCACGTTGCGATTTCGTTTTGGTTGATCTCTATGGCCATGGTTGCCGCTACTGCTTTTTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTATATTGACTGGTTGATTACGGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACAGCTGTTGCTTCAAGCCTTTTCTGGAGATTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTGTATATCATCTACGAGGTTTTTGCAGGTGAAGCTAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGATGGGCAATTTATCCAATTGGTTATGCTGTAGGTTACTTCGGTGGCGGTGTTGACGCTGGTTCATTGAACTTAATCTATAACCTTGCAGACTTTGTAAATAAAATTGCATTTGGTATGGCTATTTATGTAGCTGCAGTATCAGACAGCAAC IKGKINMKVLMLNPGDHVAISFWLISMAMVAATAFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYPIGYAVGYFGGGVDAGSLNLIYNLADFVNKIAFGMAIYVAAVSDSN ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAAGGGGAAAATAAACATGAAAGTATTAATGCTAAATCCCGGAGATCACGTTGCGATTTCGTTTTGGTTGATCTCTATGGCCATGGTTGCCGCTACTGCTTTTTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTATATTGACTGG------------------------TTGATTACGGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACAGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---TTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTGTATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCTAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGATGG---------GCAATTTATCCAATTGGTTATGCTGTAGGTTACTTCGGT---GGCGGT---------------------------GTTGACGCT---------GGTTCATTGAACTTAATCTATAACCTTGCAGACTTTGTAAATAAAATTGCATTTGGTATGGCTATTTATGTAGCTGCAGTATCAGAC---AGCAAC--------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------IKGKINMKVLMLNPGDHVAISFWLISMAMVAATAFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYPIGYAVGYFG-GG---------VDA---GSLNLIYNLADFVNKIAFGMAIYVAAVSD-SN--------------------------------------- [IV-Alpha7-HOT2C01]_EU079187 [IV-Alpha7-HOT2C01] NASB_14_env_samples_EU079187 gi|156106534|gb|EU079187| Uncultured organism clone NASB 14 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 14 putative proteorhodopsin gene, partial cds EU079187 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGCTACGTAGACTGGTTGATTACGGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACAGCTGTTGCTTCAAGCCTTTTCTGGAGATTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTGTATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGCGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGCTGGGCAATCTAC RYVDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTACGTAGACTGG------------------------TTGATTACGGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACAGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---TTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTGTATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGC---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGCTGG---------GCAATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU916148 [IV-Alpha7-HOT2C01] clone_2M-9_EU916148 gi|229359170|gb|EU916148| Uncultured bacterium clone 2M-9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 2M-9 putative proteorhodopsin gene, partial cds. EU916148 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTTGCCGCTACTGCTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGGCGACTCACCAACAGTCCTTCGTTATATTGACTGGTTGATTACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCTATGGCTGTTGCTTCAAGCCTTTTCTGGAGATTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGCTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTAGGATGGGCAATTTAT MVAATAFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEAFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGCTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT---------------------------------------------------------GGCGACTCACCAACAGTCCTTCGTTATATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCT---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---TTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGCT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGATGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEA-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU916081 [IV-Alpha7-HOT2C01] clone_A150034_EU916081 gi|229359043|gb|EU916081| Uncultured bacterium clone A150034 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A150034 putative proteorhodopsin gene, partial cds. EU916081 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTTGCCGCTACTGTATTCTTCTTTCTAGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTGTGGGTTGGTGACTCACCAACTGTCCTTCGTTATATTGACTGGTTGATTACCGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTTGCTCCAAGCCTTTTCTGGAGACTACTTATTGCATCAATTATTATGCTCGTCCTCGGTTACATGGGTGAAACTGGAGCGATGAATGTGACTCTAGCCTTCGTTATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGATGGGCAATTTAT MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVAPSLFWRLLIASIIMLVLGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTATTCTTCTTTCTAGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTGTGGGTT---------------------------------------------------------GGTGACTCACCAACTGTCCTTCGTTATATTGACTGG------------------------TTGATTACCGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTTGCTCCA---AGCCTT------------------------------------TTCTGGAGA---CTACTTATTGCATCAATTATTATGCTCGTCCTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTG------------------ACTCTAGCC---TTCGTTATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGATGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAP-SL------------FWR-LLIASIIMLVLGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU916142 [IV-Alpha7-HOT2C01] clone_a-xm-18_EU916142 gi|229359158|gb|EU916142| Uncultured bacterium clone a-xm-18 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone a-xm-18 putative proteorhodopsin gene, partial cds. EU916142 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTAGCCGCTACTGCTTTCTTCTTTCTAGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTGTGGGTTGGTGACTCACCAACTGTCCTTCGTTATATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTACTTATTGCATCAATTATTATGCTCGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTTATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGATGGGCAATTTAT MVAATAFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGCTTTCTTCTTTCTAGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTGTGGGTT---------------------------------------------------------GGTGACTCACCAACTGTCCTTCGTTATATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTACTTATTGCATCAATTATTATGCTCGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTTATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGATGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU916082 [IV-Alpha7-HOT2C01] clone_A150035_EU916082 gi|229359045|gb|EU916082| Uncultured bacterium clone A150035 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A150035 putative proteorhodopsin gene, partial cds. EU916082 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTAGCCGCTACTGTTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGGTGACTCACCAACTGTCCTTCGTTATATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCAATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTCGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGATGGGCAATTTAT MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT---------------------------------------------------------GGTGACTCACCAACTGTCCTTCGTTATATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCA---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTCGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGATGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU916155 [IV-Alpha7-HOT2C01] clone_2M-27_EU916155 gi|229359184|gb|EU916155| Uncultured bacterium clone 2M-27 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 2M-27 putative proteorhodopsin gene, partial cds. EU916155 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTCGCCGCTACTGTTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGGTGACTCACCAACAGTCCTTCGTTATATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTCGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAATGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTAGGATGGGCAATTTAT MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCCGCTACTGTTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT---------------------------------------------------------GGTGACTCACCAACAGTCCTTCGTTATATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTCGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAATGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGATGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU916133 [IV-Alpha7-HOT2C01] clone_XM-2_EU916133 gi|229359140|gb|EU916133| Uncultured bacterium clone XM-2 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone XM-2 putative proteorhodopsin gene, partial cds. EU916133 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTAGCCGCTACTGTTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGGTGACTCACCAACAGTCCTTCGTTATATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTCGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATACATCATCTATGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTAGGATGGGCAATTTAT MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT---------------------------------------------------------GGTGACTCACCAACAGTCCTTCGTTATATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTCGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATACATCATCTATGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGATGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU916152 [IV-Alpha7-HOT2C01] clone_2M-17_EU916152 gi|229359178|gb|EU916152| Uncultured bacterium clone 2M-17 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 2M-17 putative proteorhodopsin gene, partial cds. EU916152 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTCGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGGTGACTCACCAACAGTCCTTCGTTATATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTCGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGCTATATATCATCTATGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTAGGATGGGCAATTTAT MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT---------------------------------------------------------GGTGACTCACCAACAGTCCTTCGTTATATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTCGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGCTATATATCATCTATGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGATGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU916154 [IV-Alpha7-HOT2C01] clone_2M-25_EU916154 gi|229359182|gb|EU916154| Uncultured bacterium clone 2M-25 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 2M-25 putative proteorhodopsin gene, partial cds. EU916154 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump G97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTAGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGGTGACTCACCAACAGTCCTTCGTTATATTGGCTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCTATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTCGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGCTATATATCATCTATGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTAGGATGGGCAATTTAT MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIGWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT---------------------------------------------------------GGTGACTCACCAACAGTCCTTCGTTATATTGGCTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCT---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTCGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGCTATATATCATCTATGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGATGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIGW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU916149 [IV-Alpha7-HOT2C01] clone_2M-10_EU916149 gi|229359172|gb|EU916149| Uncultured bacterium clone 2M-10 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 2M-10 putative proteorhodopsin gene, partial cds. EU916149 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTAGCCGCTACTGTTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGGTGACTCACCAACAGTCCTTCGTTATATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTCGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGCTATATATCATCTATGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTAGGATGGGCAATTTAT MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT---------------------------------------------------------GGTGACTCACCAACAGTCCTTCGTTATATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTCGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGCTATATATCATCTATGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGATGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EF100785 [IV-Alpha7-HOT2C01] clone_ID29001_EF100785 gi|126513349|gb|EF100785| Uncultured bacterium clone ID29001 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID29001 putative proteorhodopsin gene, partial cds. EF100785 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-nov-07 #na surface water Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGGTGGCCGCTACTGTGTTCTTCTTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACAGGTGACTCACCAACAGTCCTTCGTTATATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTCGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTAGGATGGGCCATATATCCA MVAATVFFFERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTGTTCTTCTTT---GAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACA---------------------GGTGACTCACCAACAGTCCTTCGTTATATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTCGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGATGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFF-ERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU916145 [IV-Alpha7-HOT2C01] clone_a-xm-26_EU916145 gi|229359164|gb|EU916145| Uncultured bacterium clone a-xm-26 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone a-xm-26 putative proteorhodopsin gene, partial cds. EU916145 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGTTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGGTGACTCACCAACAGTCCTTCGTTATATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTCGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGTTTTTGCAGGTGAAGCAAGCAAGGCGAGTGCTGGTGGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTAGGATGGGCAATATAT MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGGGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT---------------------------------------------------------GGTGACTCACCAACAGTCCTTCGTTATATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTCGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCGAGTGCTGGT------GGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGATGG---------GCAATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--G-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU916080 [IV-Alpha7-HOT2C01] clone_A150033_EU916080 gi|229359041|gb|EU916080| Uncultured bacterium clone A150033 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A150033 putative proteorhodopsin gene, partial cds. EU916080 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGCATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGGTGACTCACCAACAGTCCTTCGTTATATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTCGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTAGGATGGGCAATTTAT MVAATAFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT---------------------------------------------------------GGTGACTCACCAACAGTCCTTCGTTATATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTCGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGATGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU916143 [IV-Alpha7-HOT2C01] clone_a-xm-21_EU916143 gi|229359160|gb|EU916143| Uncultured bacterium clone a-xm-21 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone a-xm-21 putative proteorhodopsin gene, partial cds. EU916143 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGGTGACTCACCAACAGTCCTTCGTTATATTGACTGGTTGATTACTGTGCCCCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTCGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAAATTAATTGTTACAGTAGGATGGGCAATTTAT MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALKLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT---------------------------------------------------------GGTGACTCACCAACAGTCCTTCGTTATATTGACTGG------------------------TTGATTACTGTGCCCCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTCGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AAATTAATTGTTACAGTA---------------------------------------------------------------GGATGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-KLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU916153 [IV-Alpha7-HOT2C01] clone_2M-22_EU916153 gi|229359180|gb|EU916153| Uncultured bacterium clone 2M-22 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 2M-22 putative proteorhodopsin gene, partial cds. EU916153 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGGTGACTCACCAACAGTCCTTCGTTATATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTCGTCTTCGGTTACAGGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAATGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTAGGATGGGCAATTTAT MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYRGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT---------------------------------------------------------GGTGACTCACCAACAGTCCTTCGTTATATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTCGTCTTCGGTTACAGGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAATGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGATGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYRGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU916139 [IV-Alpha7-HOT2C01] clone_a-xm-11_EU916139 gi|229359152|gb|EU916139| Uncultured bacterium clone a-xm-11 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone a-xm-11 putative proteorhodopsin gene, partial cds. EU916139 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGGTGACTCACCAACAGTCCTTCGTTATATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTCGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGCTATATATCATCTATGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTAGGATGGGCAATTTAT MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT---------------------------------------------------------GGTGACTCACCAACAGTCCTTCGTTATATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTCGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGCTATATATCATCTATGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGATGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915951 [IV-Alpha7-HOT2C01] clone_AH015-4_EU915951 gi|229358784|gb|EU915951| Uncultured bacterium clone AH015-4 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AH015-4 putative proteorhodopsin gene, partial cds. EU915951 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGCGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTGCATGAGAGGCGTATGGGTTGGTGACTCACCAACTGTCCTTCGTTATATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCAATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTCGTCTTCGGTTACATGGGTGAAACTGGAACGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTGATTGTTACAGTAGGATGGGCAATTTAT MVAATAFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFCMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGTMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTGCATGAGAGGCGTATGGGTT---------------------------------------------------------GGTGACTCACCAACTGTCCTTCGTTATATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCA---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTCGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------ACG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTGATTGTTACAGTA---------------------------------------------------------------GGATGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFCMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--T-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU916083 [IV-Alpha7-HOT2C01] clone_A150036_EU916083 gi|229359047|gb|EU916083| Uncultured bacterium clone A150036 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A150036 putative proteorhodopsin gene, partial cds. EU916083 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTTGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGGTGACTCACCAACCGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCTATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTTGTCTTTGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCCGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGATGGGCAATTTAT MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT---------------------------------------------------------GGTGACTCACCAACCGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCT---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTTGTCTTTGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCCGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGATGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ927026 [IV-Alpha7-HOT2C01] clone_AT06020_DQ927026 gi|116294167|gb|DQ927026| Uncultured bacterium clone AT06020 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT06020 putative proteorhodopsin gene, partial cds. DQ927026 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGGTTGCCGCAACCGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACCGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCTATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTTGTCTTTGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGGTGGGCCATCTATCCA MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCAACCGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACCGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCT---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTTGTCTTTGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU079214 [IV-Alpha7-HOT2C01] NASB_76_env_samples_EU079214 gi|156106588|gb|EU079214| Uncultured organism clone NASB 76 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 76 putative proteorhodopsin gene, partial cds EU079214 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGCTATATTGATTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCTATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAACTGCATCAATTATTATGCTTGTCTTTGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATCGAGATTAATTGTTACAGTCGGATGGGCAATCTAT RYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLTASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNASRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTATATTGATTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCT---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAACTGCATCAATTATTATGCTTGTCTTTGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATCG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGATGG---------GCAATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLTASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AS-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU916141 [IV-Alpha7-HOT2C01] clone_a-xm-16_EU916141 gi|229359156|gb|EU916141| Uncultured bacterium clone a-xm-16 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone a-xm-16 putative proteorhodopsin gene, partial cds. EU916141 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTTGCCGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGGTGACTCACCAACAGTCCTTCGTTATATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCTATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTTGTCTTTGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGATGGCCAATTTAT MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWPIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT---------------------------------------------------------GGTGACTCACCAACAGTCCTTCGTTATATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCT---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTTGTCTTTGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGATGG---------CCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---PIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EF088622 [IV-Alpha7-HOT2C01] PF13023_env_samples_EF088622 gi|126843494|gb|EF088622| Uncultured bacterium clone PF13023 putative proteorhodopsin gene, partial cds Uncultured bacterium clone PF13023 putative proteorhodopsin gene, partial cds EF088622 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na surface_water_sample Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTTGCCGCTACTGCCTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGGGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTATATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTTGTCTTTGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGATGGGCTATATATCCA MVAATAFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGCCTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGGGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTATATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTTGTCTTTGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGATGG---------GCTATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_1105105090978 [IV-Alpha7-HOT2C01] JCVI_ORF_1105105090978_GS047_Open_Ocean_30m jcvi|1105105090978| 1105105090978 JCVI ORF 1105105090978 1105105090978 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 28-mars-04 Open_Ocean/30m_depth/S_37.3_psu/GS047/201_miles_from_F._Polynesia/Tropical_South_Pacific Pacific Ocean marine -10.131389 -135.44945 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATTAAGGGGAAAAATAACATGAAAGTATTAATGCTAAATCCCGGAGATCACGTAGCGATATCGTTTTGGTTGATCTCTATGGCCATGGTAGCTGCTACTGCTTTCTTCTTTCTTGAAAGAGATCGTGTAGCTGCAAAATGGAAGACGTCCCTTACTGTAGCCGGTTTGGTTACTGGTATCGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTCGCTACTGGTGACTCTCCGACAGTCCTAAGGTATATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTTTATGTAATTCTTGCTGCAATGACTGCAGTTTCATCTAGCCTATTCTGGAGACTACTCATCGCTTCCATCGTGATGCTTGTTTTCGGTTACATGGGAGAAACAGGCGCAATGAGCGCAATGCTAGGCTTTGTCATTGGAATGGCAGCTTGGATTTACATAATTTACGAGGTATTTGCAGGTGAAGCAAGTAAAGCAAGTGCTGGCAGTGGAAATGCTGCTGGTCAAGCTGCATTTAACGCGTTGAGATTGATCGTTACAGTTGGTTGGGCGATTTATCCAATCGGATATGCGGTAGGTTACTTTGGTGGTGGCGTCGACGCTGGTTCACTGAACTTAATCTACAACCTTGCTGACTTTGTTAACAAAATTGCATTTGGTATGGCTATTTATGTAGCTTTCCCCAAAGGGGCG IKGKNNMKVLMLNPGDHVAISFWLISMAMVAATAFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVSSSLFWRLLIASIVMLVFGYMGETGAMSAMLGFVIGMAAWIYIIYEVFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYPIGYAVGYFGGGVDAGSLNLIYNLADFVNKIAFGMAIYVAFPKGA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAAGGGGAAAAATAACATGAAAGTATTAATGCTAAATCCCGGAGATCACGTAGCGATATCGTTTTGGTTGATCTCTATGGCCATGGTAGCTGCTACTGCTTTCTTCTTTCTTGAAAGAGATCGTGTAGCTGCA---AAATGGAAGACGTCCCTTACTGTAGCCGGTTTGGTTACTGGTATCGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTC------------------------------GCTACT---------------------GGTGACTCTCCGACAGTCCTAAGGTATATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTTTATGTAATTCTTGCTGCA---------ATG---ACTGCAGTTTCATCT---AGCCTA------------------------------------TTCTGGAGA---CTACTCATCGCTTCCATCGTGATGCTTGTTTTCGGTTACATGGGAGAA---------ACA------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------AGCGCA------------------ATGCTAGGC---TTTGTCATTGGAATGGCAGCTTGGATTTACATAATTTACGAGGTA---------------TTT------GCA---GGTGAAGCAAGTAAAGCAAGTGCTGGC------AGT---GGAAATGCTGCTGGT---CAA---GCT---GCA---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCGATTTATCCAATCGGATATGCGGTAGGTTACTTTGGT---GGTGGC---------------------------GTCGACGCT---------GGTTCACTGAACTTAATCTACAACCTTGCTGACTTTGTTAACAAAATTGCATTTGGTATGGCTATTTATGTAGCTTTCCCCAAAGGG---GCG------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------IKGKNNMKVLMLNPGDHVAISFWLISMAMVAATAFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVSS-SL------------FWR-LLIASIVMLVFGYMGE---T------G--A-----------M----------------------SA------MLG-FVIGMAAWIYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYPIGYAVGYFG-GG---------VDA---GSLNLIYNLADFVNKIAFGMAIYVAFPKG-A---------------------------------------- [IV-Alpha7-HOT2C01]_1105127390978 [IV-Alpha7-HOT2C01] JCVI_ORF_1105127390978_GS031_Coastal_upwelling_12m jcvi|1105127390978| 1105127390978 JCVI ORF 1105127390978 1105127390978 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 10-FEB-2004 Coastal_upwelling/12m_depth/S_n.a/GS031/Upwelling/Fernandina_Island/Galapagos_Islands Pacific Ocean marine -0.3011111 -91.651665 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATTAAGGGGAAAAATAACATGAAAGTATTAATGCTAAATCCCGGAGATCACGTAGCGATATCGTTTTGGTTGATCTCTATGGCCATGGTAGCTGCTACTGCTTTCTTCTTTCTAGAAAGAGATCGTGTAGCTGCAAAATGGAAGACGTCCCTTACTGTAGCCGGTTTGGTTACTGGTATCGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTCGCTACTGGTGACTCTCCAACAGTCCTAAGGTATATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTTTATGTAATTCTTGCTGCAATGACTGCAGTTTCATCAAGCCTATTCTGGAGACTACTCATCGCTTCTATCGTGATGCTTGTTTTCGGTTACATGGGTGAAACAGGCGCAATGAGCGCAATGCTAGGCTTTGTCATTGGAATGGCAGCTTGGATTTACATAATTTACGAGGTATTTGCAGGTGAAGCAAGTAAAGCAAGTGCTGGCAGTGGAAATGCTGCTGGTCAAGCTGCATTTAACGCGTTGAGATTGATCGTTACAGTTGGTTGGGCGATTTATCCAATAGGTTATGCGGTAGGTTATTTTGGTGGTGGCGTTGACGCTGGTTCACTGAACTTGATCTACAACCTTGCTGACTTTGTTAACAAAATTGCATTTGGTATGGCTATTTATGTAGCTGCAGTATCAGACAGCAAC IKGKNNMKVLMLNPGDHVAISFWLISMAMVAATAFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVSSSLFWRLLIASIVMLVFGYMGETGAMSAMLGFVIGMAAWIYIIYEVFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYPIGYAVGYFGGGVDAGSLNLIYNLADFVNKIAFGMAIYVAAVSDSN ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAAGGGGAAAAATAACATGAAAGTATTAATGCTAAATCCCGGAGATCACGTAGCGATATCGTTTTGGTTGATCTCTATGGCCATGGTAGCTGCTACTGCTTTCTTCTTTCTAGAAAGAGATCGTGTAGCTGCA---AAATGGAAGACGTCCCTTACTGTAGCCGGTTTGGTTACTGGTATCGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTC------------------------------GCTACT---------------------GGTGACTCTCCAACAGTCCTAAGGTATATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTTTATGTAATTCTTGCTGCA---------ATG---ACTGCAGTTTCATCA---AGCCTA------------------------------------TTCTGGAGA---CTACTCATCGCTTCTATCGTGATGCTTGTTTTCGGTTACATGGGTGAA---------ACA------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------AGCGCA------------------ATGCTAGGC---TTTGTCATTGGAATGGCAGCTTGGATTTACATAATTTACGAGGTA---------------TTT------GCA---GGTGAAGCAAGTAAAGCAAGTGCTGGC------AGT---GGAAATGCTGCTGGT---CAA---GCT---GCA---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCGATTTATCCAATAGGTTATGCGGTAGGTTATTTTGGT---GGTGGC---------------------------GTTGACGCT---------GGTTCACTGAACTTGATCTACAACCTTGCTGACTTTGTTAACAAAATTGCATTTGGTATGGCTATTTATGTAGCTGCAGTATCAGAC---AGCAAC--------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------IKGKNNMKVLMLNPGDHVAISFWLISMAMVAATAFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVSS-SL------------FWR-LLIASIVMLVFGYMGE---T------G--A-----------M----------------------SA------MLG-FVIGMAAWIYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYPIGYAVGYFG-GG---------VDA---GSLNLIYNLADFVNKIAFGMAIYVAAVSD-SN--------------------------------------- [IV-Alpha7-HOT2C01]_1105102539244 [IV-Alpha7-HOT2C01] JCVI_ORF_1105102539244 jcvi|1105102539244| 1105102539244 JCVI ORF 1105102539244 1105102539244 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 01-mars-04 Coastal/2m_depth/S_34.5_psu/GS035/Wolf_Island/Galapagos_Islands Pacific Ocean marine 1.3891667 -91.81695 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TTGGTGATCTCTATGGCCATGGTAGCTGCTACTGCTTTCTTCTTTCTTGAAAGAGATCGTGTAGCTGCAAAATGGAAGACGTCCCTTACTGTAGCCGGTTTGGTTACTGGTATCGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCGTAAGATATATTGACTGGTTGATTACAGTGCCTCTACAAATCGTAGAATTTTATGTAATTCTTGCTGCAATGACTGCAGTTTCATCAAGCCTATTCTGGAGACTACTCATCGCTTCTATCGTGATGCTTGTTTTCGGTTACATGGGTGAAACAGGCGCAATGAGCGCAATGCTAGGCTTTGTCATTGGAATGGCAGCTTGGATTTACATAATTTACGAGGTATTTGCAGGTGAAGCAAGTAAAGCAAGTGCTGGCAGTGGAAATGCTGCTGGTCAAGCTGCATTTAACGCGTTGAGATTGATCGTTACAGTTGGTTGGGCGATTTATCCAATCGGTTATGCGGTAGGTTATTTTGGTGGCGGCGTTGACGCTGGTTCACTGAACTTGATCTACAACCTTGCTGACTTTGTTAACAAAATTGCATTTGGTATGGCTATTTATGTAGCTGCAGTATCAGACAGCAAC LVISMAMVAATAFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVVRYIDWLITVPLQIVEFYVILAAMTAVSSSLFWRLLIASIVMLVFGYMGETGAMSAMLGFVIGMAAWIYIIYEVFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYPIGYAVGYFGGGVDAGSLNLIYNLADFVNKIAFGMAIYVAAVSDSN ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGTGATCTCTATGGCCATGGTAGCTGCTACTGCTTTCTTCTTTCTTGAAAGAGATCGTGTAGCTGCA---AAATGGAAGACGTCCCTTACTGTAGCCGGTTTGGTTACTGGTATCGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCGTAAGATATATTGACTGG------------------------TTGATTACAGTGCCTCTACAAATCGTAGAATTTTATGTAATTCTTGCTGCA---------ATG---ACTGCAGTTTCATCA---AGCCTA------------------------------------TTCTGGAGA---CTACTCATCGCTTCTATCGTGATGCTTGTTTTCGGTTACATGGGTGAA---------ACA------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------AGCGCA------------------ATGCTAGGC---TTTGTCATTGGAATGGCAGCTTGGATTTACATAATTTACGAGGTA---------------TTT------GCA---GGTGAAGCAAGTAAAGCAAGTGCTGGC------AGT---GGAAATGCTGCTGGT---CAA---GCT---GCA---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCGATTTATCCAATCGGTTATGCGGTAGGTTATTTTGGT---GGCGGC---------------------------GTTGACGCT---------GGTTCACTGAACTTGATCTACAACCTTGCTGACTTTGTTAACAAAATTGCATTTGGTATGGCTATTTATGTAGCTGCAGTATCAGAC---AGCAAC--------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------LVISMAMVAATAFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVVRYIDW--------LITVPLQIVEFYVILAA---M-TAVSS-SL------------FWR-LLIASIVMLVFGYMGE---T------G--A-----------M----------------------SA------MLG-FVIGMAAWIYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYPIGYAVGYFG-GG---------VDA---GSLNLIYNLADFVNKIAFGMAIYVAAVSD-SN--------------------------------------- [IV-Alpha7-HOT2C01]_EF088643 [IV-Alpha7-HOT2C01] PF13036_env_samples_EF088643 gi|126843536|gb|EF088643| Uncultured bacterium clone PF13036 putative proteorhodopsin gene, partial cds Uncultured bacterium clone PF13036 putative proteorhodopsin gene, partial cds EF088643 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na surface_water_sample Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTAGCCGCTACTGTCTTCTTCTTTCTTGAAAGAGATCGTGTAGCTGCAAAATGGAAGACGTCCCTTACTGTAGCCGGTTTGGTTACTGGTATCGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTAAGATATATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTTTATGTAATTCTTGCTGCAATGACTGCAGTTTCATCAAGCCTATTCTGGAGACTACTTATCGCGTCTATTGTGATGCTTGTTTTCGGTTACATGGGTGAAACAGGCGCAATGAGCGCAATGCTTGGCTTTGTCATTGGAATGGCAGCTTGGATTTACATAATTTACGAGGTATTTGCAGGTGAAGCAAGTAAGGCAAGTGCTGGCAGTGGAAATGCTGCTGGACAAGCTGCATTTAACGCATTGAGATTGATCGTTACAGTTGGGTGGGCAATTTAT MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVSSSLFWRLLIASIVMLVFGYMGETGAMSAMLGFVIGMAAWIYIIYEVFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTCTTCTTCTTTCTTGAAAGAGATCGTGTAGCTGCA---AAATGGAAGACGTCCCTTACTGTAGCCGGTTTGGTTACTGGTATCGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTAAGATATATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTTTATGTAATTCTTGCTGCA---------ATG---ACTGCAGTTTCATCA---AGCCTA------------------------------------TTCTGGAGA---CTACTTATCGCGTCTATTGTGATGCTTGTTTTCGGTTACATGGGTGAA---------ACA------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------AGCGCA------------------ATGCTTGGC---TTTGTCATTGGAATGGCAGCTTGGATTTACATAATTTACGAGGTA---------------TTT------GCA---GGTGAAGCAAGTAAGGCAAGTGCTGGC------AGT---GGAAATGCTGCTGGA---CAA---GCT---GCA---TTT---AAC---GCATTG---AGATTGATCGTTACAGTT---------------------------------------------------------------GGGTGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVSS-SL------------FWR-LLIASIVMLVFGYMGE---T------G--A-----------M----------------------SA------MLG-FVIGMAAWIYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EF100801 [IV-Alpha7-HOT2C01] clone_ID29027_EF100801 gi|126513381|gb|EF100801| Uncultured bacterium clone ID29027 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID29027 putative proteorhodopsin gene, partial cds. EF100801 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-nov-07 #na surface water Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGGTGGCCGCTACTGTGTTCTTCTTTCTGGAGAGAGATCGTGTAGCTGCAAAATGGAAGACGTCCCTTACTGTAGCCGGTTTGGTTACTGGTATCGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCTTAAGATATATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTTTATGTAATTCTTGCTGCAATGACTGCAGTTTCATCAAGCCTATTCTGGAGACTACTTATCGCGTCTATCGTGATGCTTGTTTTCGGTTACATGGGTGAAACAGGCGCAATGAGCGCAATGCTAGGCTTTGTCATTGGAATGGCAGCTTGGATTTACATAATTTACGAGGTATTTGCAGGTGAAGCAAGTAAGGCAAGTGCTGGCAGTGGAAATGCTGCTGGACAAGCTGCATTTAACGCATTGAGATTGATCGTTACAGTTGGTTGGGCGATTTATCCA MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVSSSLFWRLLIASIVMLVFGYMGETGAMSAMLGFVIGMAAWIYIIYEVFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTGTTCTTCTTTCTGGAGAGAGATCGTGTAGCTGCA---AAATGGAAGACGTCCCTTACTGTAGCCGGTTTGGTTACTGGTATCGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCTTAAGATATATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTTTATGTAATTCTTGCTGCA---------ATG---ACTGCAGTTTCATCA---AGCCTA------------------------------------TTCTGGAGA---CTACTTATCGCGTCTATCGTGATGCTTGTTTTCGGTTACATGGGTGAA---------ACA------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------AGCGCA------------------ATGCTAGGC---TTTGTCATTGGAATGGCAGCTTGGATTTACATAATTTACGAGGTA---------------TTT------GCA---GGTGAAGCAAGTAAGGCAAGTGCTGGC------AGT---GGAAATGCTGCTGGA---CAA---GCT---GCA---TTT---AAC---GCATTG---AGATTGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCGATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVSS-SL------------FWR-LLIASIVMLVFGYMGE---T------G--A-----------M----------------------SA------MLG-FVIGMAAWIYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915797 [IV-Alpha7-HOT2C01] PF92067_env_samples_EU915797 gi|229358476|gb|EU915797| Uncultured microorganism clone PF92067 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF92067 putative proteorhodopsin gene, partial cds EU915797 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTAGCCGCTACTGTTTTCTTCTTTCTAGAAAGAGATCGTGTAGCTGCAAAATGGAAGACGTCCCTTACTGTAGCCGGTTTGGTTACTGGTATCGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTCGCTACTGGTGACTCTCCAACAGTCCTTAGATATATCGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTTTATGTAATTCTTGCTGCAATGACTGCAGTTTCATCAAGCCTATTCTGGAGACTACTTATCGCGTCTATCGTGATGCTTGTTTTCGGTTACATGGGTGAAACAGGCGCAATGAGCGCAATGCTAGGCTTTGTCATTGGAATGGCAGCTTGGATTTACATAATCTATGAAGTATTTGCAGGTGAAGCAAGTAAAGCAAGTGCTGGCAGTGGAAATGCTGCTGGTCAAGCTGCATTTAACGCGTTGAGATTGATCGTTACAGTTGGTTGGGCAATCTAC MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVSSSLFWRLLIASIVMLVFGYMGETGAMSAMLGFVIGMAAWIYIIYEVFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTTTTCTTCTTTCTAGAAAGAGATCGTGTAGCTGCA---AAATGGAAGACGTCCCTTACTGTAGCCGGTTTGGTTACTGGTATCGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTC------------------------------GCTACT---------------------GGTGACTCTCCAACAGTCCTTAGATATATCGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTTTATGTAATTCTTGCTGCA---------ATG---ACTGCAGTTTCATCA---AGCCTA------------------------------------TTCTGGAGA---CTACTTATCGCGTCTATCGTGATGCTTGTTTTCGGTTACATGGGTGAA---------ACA------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------AGCGCA------------------ATGCTAGGC---TTTGTCATTGGAATGGCAGCTTGGATTTACATAATCTATGAAGTA---------------TTT------GCA---GGTGAAGCAAGTAAAGCAAGTGCTGGC------AGT---GGAAATGCTGCTGGT---CAA---GCT---GCA---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCAATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVSS-SL------------FWR-LLIASIVMLVFGYMGE---T------G--A-----------M----------------------SA------MLG-FVIGMAAWIYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915800 [IV-Alpha7-HOT2C01] PF92076_env_samples_EU915800 gi|229358482|gb|EU915800| Uncultured microorganism clone PF92076 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF92076 putative proteorhodopsin gene, partial cds EU915800 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTTGCCGCTACTGCGTTCTTCTTTCTAGAAAGAGATCGTGTAGCTGCAAAATGGAAGACGTCCCTTACTGTAGCCGGTTTGGTTACTGGTATCGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCTCCAACAGTCCTTAGATATATCGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTTTATGTAATTCTTGCTGCAATGACTGCAGTTTCATCAAGCCTATTCTGGAGACTACTTATCGCGTCTATCGTGATGCTTGTTTTCGGTTACATGGGTGAAACAGGCGCAATGAGCGCAATGCTAGGCTTTGTCATTGGAATGGCAGCTTGGATTTACATAATTTACGAGGTATTTGCAGGTGAAGCAAGCAAAGCAAGTGCTGGCAGTGGAAATGCTGCTGGTCAAGCTGCATTTAACGCGTTGAGATTGATCGTTACAGTTGGGTGGGCCATTTAC MVAATAFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVSSSLFWRLLIASIVMLVFGYMGETGAMSAMLGFVIGMAAWIYIIYEVFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGCGTTCTTCTTTCTAGAAAGAGATCGTGTAGCTGCA---AAATGGAAGACGTCCCTTACTGTAGCCGGTTTGGTTACTGGTATCGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCTCCAACAGTCCTTAGATATATCGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTTTATGTAATTCTTGCTGCA---------ATG---ACTGCAGTTTCATCA---AGCCTA------------------------------------TTCTGGAGA---CTACTTATCGCGTCTATCGTGATGCTTGTTTTCGGTTACATGGGTGAA---------ACA------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------AGCGCA------------------ATGCTAGGC---TTTGTCATTGGAATGGCAGCTTGGATTTACATAATTTACGAGGTA---------------TTT------GCA---GGTGAAGCAAGCAAAGCAAGTGCTGGC------AGT---GGAAATGCTGCTGGT---CAA---GCT---GCA---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTT---------------------------------------------------------------GGGTGG---------GCCATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVSS-SL------------FWR-LLIASIVMLVFGYMGE---T------G--A-----------M----------------------SA------MLG-FVIGMAAWIYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU224304 [IV-Alpha7-HOT2C01] clone_1812206_EU224304 gi|164698780|gb|EU224304| Uncultured bacterium clone 1812206 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 1812206 putative proteorhodopsin gene, partial cds. EU224304 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2008 #na surface water sample Indian Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGGTTGCCGCTACTGTTTTCTTCTTTCTAGAGAGAGATCGTGTAGCTGCAAAATGGAAGACGTCCCTTACTGTAGCCGGTTTGGTTACTGGTATCGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCTCCAACAGTCCTTAGATATATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTTTATGTAATTCTTGCTGCAATGACTGCAGTTTCATCAAGCCTATTCTGGAGACTACTTATCGCGTCTATCGTGATGCTTGTTTTCGGTTATATGGGTGAAACAGGCGCAATGAGCGCGATGCTAGGCTTTGTCACTGGAATGGCAGCTTGGATTTACATAATTTACGAGGTATTTGCAGGTGAAGCAAGTAAAGCAAGTGCTGGCAGTGGAAATGCTGCTGGTCAAGCTGCATTTAACGCGTTGAGATTGGTCGTTACAGTTGGATGGGCCATTTACCCCA MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVSSSLFWRLLIASIVMLVFGYMGETGAMSAMLGFVTGMAAWIYIIYEVFAGEASKASAGSGNAAGQAAFNALRLVVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTTTTCTTCTTTCTAGAGAGAGATCGTGTAGCTGCA---AAATGGAAGACGTCCCTTACTGTAGCCGGTTTGGTTACTGGTATCGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCTCCAACAGTCCTTAGATATATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTTTATGTAATTCTTGCTGCA---------ATG---ACTGCAGTTTCATCA---AGCCTA------------------------------------TTCTGGAGA---CTACTTATCGCGTCTATCGTGATGCTTGTTTTCGGTTATATGGGTGAA---------ACA------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------AGCGCG------------------ATGCTAGGC---TTTGTCACTGGAATGGCAGCTTGGATTTACATAATTTACGAGGTA---------------TTT------GCA---GGTGAAGCAAGTAAAGCAAGTGCTGGC------AGT---GGAAATGCTGCTGGT---CAA---GCT---GCA---TTT---AAC---GCGTTG---AGATTGGTCGTTACAGTT---------------------------------------------------------------GGATGG---------GCCATTTACCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVSS-SL------------FWR-LLIASIVMLVFGYMGE---T------G--A-----------M----------------------SA------MLG-FVTGMAAWIYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLVVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU224293 [IV-Alpha7-HOT2C01] clone_1812226_EU224293 gi|164698758|gb|EU224293| Uncultured bacterium clone 1812226 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 1812226 putative proteorhodopsin gene, partial cds. EU224293 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2008 #na surface water sample Indian Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGGTTGCCGCTACTGTTTTCTTCTTTCTAGAGAGAGATCGTGTAGCTGCAAAATGGAAGACGTCCCTTACTGTAGCCGGTTTGGTTACTGGTATCGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCTCCAACAGTCCTTAGATATATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTTTATGTAATTCTTGCTGCAATGACTGCAGTTTCATCAAGCCTATTCTGGAGACTACTTATCGCGTCTATCGTGATGCTTGTTTTCGGTTATATGGGTGAAACAGGCGCAATGAGCGCGATGCTAGGCTTTGTCACTGGAATGGCAGCTTGGATTTACATAATTTACGAGGTATTTGCAGGTGAAGCAAGTAAAGCAAGTGCTGGCAGTGGAAATGCTGCTGGTCAAGCTGCATTTAACGCGTTGAGATTGGTCGTTACAGTTGGATGGGCCATTTACCCCA MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVSSSLFWRLLIASIVMLVFGYMGETGAMSAMLGFVTGMAAWIYIIYEVFAGEASKASAGSGNAAGQAAFNALRLVVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTTTTCTTCTTTCTAGAGAGAGATCGTGTAGCTGCA---AAATGGAAGACGTCCCTTACTGTAGCCGGTTTGGTTACTGGTATCGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCTCCAACAGTCCTTAGATATATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTTTATGTAATTCTTGCTGCA---------ATG---ACTGCAGTTTCATCA---AGCCTA------------------------------------TTCTGGAGA---CTACTTATCGCGTCTATCGTGATGCTTGTTTTCGGTTATATGGGTGAA---------ACA------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------AGCGCG------------------ATGCTAGGC---TTTGTCACTGGAATGGCAGCTTGGATTTACATAATTTACGAGGTA---------------TTT------GCA---GGTGAAGCAAGTAAAGCAAGTGCTGGC------AGT---GGAAATGCTGCTGGT---CAA---GCT---GCA---TTT---AAC---GCGTTG---AGATTGGTCGTTACAGTT---------------------------------------------------------------GGATGG---------GCCATTTACCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVSS-SL------------FWR-LLIASIVMLVFGYMGE---T------G--A-----------M----------------------SA------MLG-FVTGMAAWIYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLVVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EF079846 [IV-Alpha7-HOT2C01] clone_ID11018_EF079846 gi|126361781|gb|EF079846| Uncultured bacterium clone ID11018 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID11018 putative proteorhodopsin gene, partial cds. EF079846 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na #na Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGCTTGCCGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCTGCAAAATGGAAGACGTCCCTTACTGTAGCCGGTTTGGTTACTGGTATCGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTCGCTACCGGTGACTCTCCAACAGTCCTTAGATACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTTTATGTAATTCTTGCTGCAATGACTGCAGTTTCATCAAGCCTATTCTGGAGACTACTTATCGCGTCTATCGTGATGCTTGTTTTCGGTTATATGGGTGAAACAGGCGCAATGAGCGCAATGCTAGGCTTTGTCATTGGAATGGCAGCTTGGATTTACATAATTTACGAGGTATTTGCAGGTGAAGCAAGTAAAGCAAGTGCTGGCAGTGGAAATGCTGCTGGACAAGCTGCATTTAACGCATTGAGATTGATCGTTACAGTTGGTTGGGCTATCTATCCA MLAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVSSSLFWRLLIASIVMLVFGYMGETGAMSAMLGFVIGMAAWIYIIYEVFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCTGCA---AAATGGAAGACGTCCCTTACTGTAGCCGGTTTGGTTACTGGTATCGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTC------------------------------GCTACC---------------------GGTGACTCTCCAACAGTCCTTAGATACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTTTATGTAATTCTTGCTGCA---------ATG---ACTGCAGTTTCATCA---AGCCTA------------------------------------TTCTGGAGA---CTACTTATCGCGTCTATCGTGATGCTTGTTTTCGGTTATATGGGTGAA---------ACA------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------AGCGCA------------------ATGCTAGGC---TTTGTCATTGGAATGGCAGCTTGGATTTACATAATTTACGAGGTA---------------TTT------GCA---GGTGAAGCAAGTAAAGCAAGTGCTGGC------AGT---GGAAATGCTGCTGGA---CAA---GCT---GCA---TTT---AAC---GCATTG---AGATTGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVSS-SL------------FWR-LLIASIVMLVFGYMGE---T------G--A-----------M----------------------SA------MLG-FVIGMAAWIYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915811 [IV-Alpha7-HOT2C01] PF92015_env_samples_EU915811 gi|229358504|gb|EU915811| Uncultured microorganism clone PF92015 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF92015 putative proteorhodopsin gene, partial cds EU915811 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTATTAGCGTCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACCGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTTTTCGGTTACATGGGTGAAACAGGCGCAATGAGCGCAATGCTAGGCTTTGTCATTGGAATGGCAGCTTGGATTTACATAATTTACGAGGTATTTGCAGGTGAAGCAAGTAAAGCAAGTGCTGGCAGTGGAAATGCTGCTGGTCAAGCTGCATTTAACGCGTTGAGATTGATCGTTACAGTTGGTTGGGCCATTTAC LLASTVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMSAMLGFVIGMAAWIYIIYEVFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGTCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACCGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTTTTCGGTTACATGGGTGAA---------ACA------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------AGCGCA------------------ATGCTAGGC---TTTGTCATTGGAATGGCAGCTTGGATTTACATAATTTACGAGGTA---------------TTT------GCA---GGTGAAGCAAGTAAAGCAAGTGCTGGC------AGT---GGAAATGCTGCTGGT---CAA---GCT---GCA---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCCATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------LLASTVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------SA------MLG-FVIGMAAWIYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ926998 [IV-Alpha7-HOT2C01] clone_PF91120_DQ926998 gi|116294111|gb|DQ926998| Uncultured bacterium clone PF91120 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF91120 putative proteorhodopsin gene, partial cds. DQ926998 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGGTCGCCGCTACTGCGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACAGGCGCAATGAGCGCAATGCTAGGTTTTGTCATTGGAATGGCAGCTTGGATTTACATAATTTACGAGGTATTTGCAGGTGAAGCAAGTAAAGCAAGTGCTGGCAGTGGAAATGCTGCTGGTCAAGCTGCATTTAACGCGTTGAGATTGATCGTTACAGTTGGTTGGGCCATCTACCCA MVAATAFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMSAMLGFVIGMAAWIYIIYEVFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCCGCTACTGCGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACGGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACA------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------AGCGCA------------------ATGCTAGGT---TTTGTCATTGGAATGGCAGCTTGGATTTACATAATTTACGAGGTA---------------TTT------GCA---GGTGAAGCAAGTAAAGCAAGTGCTGGC------AGT---GGAAATGCTGCTGGT---CAA---GCT---GCA---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------SA------MLG-FVIGMAAWIYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU224299 [IV-Alpha7-HOT2C01] clone_1812201_EU224299 gi|164698770|gb|EU224299| Uncultured bacterium clone 1812201 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 1812201 putative proteorhodopsin gene, partial cds. EU224299 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2008 #na surface water sample Indian Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGCTAGCCGCTACTGCGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACAGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTTGTCCTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAATGCTGCTGGTCAAACTGCATTTAACGCATTGAGATTAATTGTTACAGTAGGATGGGCTATTTACCCA MLAATAFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVLGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTAGCCGCTACTGCGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACAGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTTGTCCTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAATGCTGCTGGT---CAA---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGATGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVLGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU916071 [IV-Alpha7-HOT2C01] clone_A150003_EU916071 gi|229359023|gb|EU916071| Uncultured bacterium clone A150003 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A150003 putative proteorhodopsin gene, partial cds. EU916071 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTCGCCGCTACTGCATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATCATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAATGCTGCTGGTCAAACTGCATTTAACGCATTGAGATTAATTGTTACAGTAGGATGGGCAATTTAT MLAATAFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTCGCCGCTACTGCATTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT---------------------------------------------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATCATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAATGCTGCTGGT---CAA---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGATGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EF079859 [IV-Alpha7-HOT2C01] clone_ID11059_EF079859 gi|126361807|gb|EF079859| Uncultured bacterium clone ID11059 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID11059 putative proteorhodopsin gene, partial cds. EF079859 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na #na Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGGTTGCCGCTACTGCTTTCTTTTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGGTGGGCCATCTACCCA MVAATAFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGCTTTCTTTTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGGTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU224301 [IV-Alpha7-HOT2C01] clone_1812203_EU224301 gi|164698774|gb|EU224301| Uncultured bacterium clone 1812203 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 1812203 putative proteorhodopsin gene, partial cds. EU224301 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2008 #na surface water sample Indian Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGGTGGCCGCTACTGTGTTCTTCTTTCTAGAAAGAGATCGTGTAGCTGCTAAATGGAAAACGTCCCTAACAGTTGCTGGTTTAGTTACTGGTGTGGCGGCGTGGCACTATTTCTACATGAGAGATGTATGGGTAGCTACAGGTGATTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTACTAATTGCATCAATTATTATGCTTGTCGGCGGTTATCTCGGTGAAACTGGAGCGATGAATGTAACACTAGCCTTTGTAATTGGTATGGCTGGATGGTTGTATATCATCTACGAGGTTTTTGCAGGTGAAGCGAGCAAGGCAAGTGCTGGTAGTGGGAATGCTGCCGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTAGGCTGGGCAATCTATCCA MVAATVFFFLERDRVAAKWKTSLTVAGLVTGVAAWHYFYMRDVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVGGYLGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTGTTCTTCTTTCTAGAAAGAGATCGTGTAGCTGCT---AAATGGAAAACGTCCCTAACAGTTGCTGGTTTAGTTACTGGTGTGGCGGCGTGGCACTATTTCTACATGAGAGATGTATGGGTA------------------------------GCTACA---------------------GGTGATTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTACTAATTGCATCAATTATTATGCTTGTCGGCGGTTATCTCGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTAGCC---TTTGTAATTGGTATGGCTGGATGGTTGTATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCGAGCAAGGCAAGTGCTGGT------AGT---GGGAATGCTGCCGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGCTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGVAAWHYFYMRDVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVGGYLGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU224308 [IV-Alpha7-HOT2C01] clone_1812210_EU224308 gi|164698788|gb|EU224308| Uncultured bacterium clone 1812210 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 1812210 putative proteorhodopsin gene, partial cds. EU224308 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2008 #na surface water sample Indian Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGGTGGCCGCTACTGTGTTCTTCTTTCTAGAAAGAGATCGTGTAGCTGCTAAATGGAAAACGTCCCTAACAGTTGCTGGTTTAGTTACTGGTGTGGCGGCGTGGCACTATTTCTACATGAGAGATGTATGGGTAGCTACAGGTGATTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTACTAATTGCATCAATTATTATGCTTGTCGGCGGTTATCTCGGTGAAACTGGAGCGATGAATGTAACACTAGCCTTTGTAATTGGTATGGCTGGATGGTTGTATATCATCTACGAGGTTTTTGCAGGTGAAGCGAGCAAGGCAAGTGCTGGTAGTGGGAATGCTGCCGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTAGGCTGGGCAATCTATCCA MVAATVFFFLERDRVAAKWKTSLTVAGLVTGVAAWHYFYMRDVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVGGYLGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTGTTCTTCTTTCTAGAAAGAGATCGTGTAGCTGCT---AAATGGAAAACGTCCCTAACAGTTGCTGGTTTAGTTACTGGTGTGGCGGCGTGGCACTATTTCTACATGAGAGATGTATGGGTA------------------------------GCTACA---------------------GGTGATTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTACTAATTGCATCAATTATTATGCTTGTCGGCGGTTATCTCGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTAGCC---TTTGTAATTGGTATGGCTGGATGGTTGTATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCGAGCAAGGCAAGTGCTGGT------AGT---GGGAATGCTGCCGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGCTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGVAAWHYFYMRDVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVGGYLGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU224288 [IV-Alpha7-HOT2C01] clone_1812221_EU224288 gi|164698748|gb|EU224288| Uncultured bacterium clone 1812221 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 1812221 putative proteorhodopsin gene, partial cds. EU224288 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2008 #na surface water sample Indian Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGGTGGCCGCTACTGTGTTCTTCTTTCTAGAAAGAGATCGTGTAGCTGCTAAATGGAAAACGTCCCTAACAGTTGCTGGTTTAGTTACTGGTGTGGCGGCGTGGCACTATTTCTACATGAGAGATGTATGGGTAGCTACAGGTGATTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTACTAATTGCATCAATTATTATGCTTGTCGGCGGTTATCTCGGTGAAACTGGAGCGATGAATGTAACACTAGCCTTTGTAATTGGTATGGCTGGATGGTTGTATATCATCTACGAGGTTTTTGCAGGTGAAGCGAGCAAGGCAAGTGCTGGTAGTGGGAATGCTGCCGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTAGGCTGGGCAATCTATCCA MVAATVFFFLERDRVAAKWKTSLTVAGLVTGVAAWHYFYMRDVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVGGYLGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTGTTCTTCTTTCTAGAAAGAGATCGTGTAGCTGCT---AAATGGAAAACGTCCCTAACAGTTGCTGGTTTAGTTACTGGTGTGGCGGCGTGGCACTATTTCTACATGAGAGATGTATGGGTA------------------------------GCTACA---------------------GGTGATTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTACTAATTGCATCAATTATTATGCTTGTCGGCGGTTATCTCGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTAGCC---TTTGTAATTGGTATGGCTGGATGGTTGTATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCGAGCAAGGCAAGTGCTGGT------AGT---GGGAATGCTGCCGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGCTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGVAAWHYFYMRDVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVGGYLGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU079175 [IV-Alpha7-HOT2C01] NASB_13_env_samples_EU079175 gi|156106510|gb|EU079175| Uncultured organism clone NASB 13 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 13 putative proteorhodopsin gene, partial cds EU079175 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGTTATATTGATTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTACTAATTGCATCAATTATTATGCTTGTCTTCGGTTATCTAGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTTGTAATTGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCGAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCCGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGCTGGGCCATTTAC RYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYLGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTATATTGATTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTACTAATTGCATCAATTATTATGCTTGTCTTCGGTTATCTAGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTTGTAATTGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCGAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCCGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGCTGG---------GCCATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYLGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ927012 [IV-Alpha7-HOT2C01] clone_AT06003_DQ927012 gi|116294139|gb|DQ927012| Uncultured bacterium clone AT06003 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT06003 putative proteorhodopsin gene, partial cds. DQ927012 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGGTGGCCGCTACGGTCTTCTTCTTTCTTGAAAGAGATCGTGTAGCTGCTAAATGGAAAACGTCCCTAACAGTTGCTGGTTTGGTTACTGATGTGGCGGCGTGGCACTATTTCTACATGAGAGATGTATGGGTAGCTACAGGTGATTCGCCAACAGTCCTTCGTTATATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTACTAATTGCATCAATTATTATGCTTGTCTTCGGTTATCTAGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTTGTAATTGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCGAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCCGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGATGGGCCATCTACCCA MVAATVFFFLERDRVAAKWKTSLTVAGLVTDVAAWHYFYMRDVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYLGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACGGTCTTCTTCTTTCTTGAAAGAGATCGTGTAGCTGCT---AAATGGAAAACGTCCCTAACAGTTGCTGGTTTGGTTACTGATGTGGCGGCGTGGCACTATTTCTACATGAGAGATGTATGGGTA------------------------------GCTACA---------------------GGTGATTCGCCAACAGTCCTTCGTTATATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTACTAATTGCATCAATTATTATGCTTGTCTTCGGTTATCTAGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTTGTAATTGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCGAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCCGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGATGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTDVAAWHYFYMRDVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYLGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ927015 [IV-Alpha7-HOT2C01] clone_AT06006_DQ927015 gi|116294145|gb|DQ927015| Uncultured bacterium clone AT06006 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT06006 putative proteorhodopsin gene, partial cds. DQ927015 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGGTGGCCGCTACGGTCTTCTTCTTTCTTGAAAGAGATCGTGTAGCTGCTAAATGGAAAACGTCCCTAACAGTTGCTGGTTTGGTTACTGATGTGGCGGCGTGGCACTATTTCTACATGAGAGATGTATGGGTAGCTACAGGTGATTCGCCAACAGTCCTTCGTTATATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTACTAATTGCATCAATTATTATGCTTGTCTTCGGTTATCTAGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTTGTAATTGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCGAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCCGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGATGGGCCATCTACCCA MVAATVFFFLERDRVAAKWKTSLTVAGLVTDVAAWHYFYMRDVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYLGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACGGTCTTCTTCTTTCTTGAAAGAGATCGTGTAGCTGCT---AAATGGAAAACGTCCCTAACAGTTGCTGGTTTGGTTACTGATGTGGCGGCGTGGCACTATTTCTACATGAGAGATGTATGGGTA------------------------------GCTACA---------------------GGTGATTCGCCAACAGTCCTTCGTTATATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTACTAATTGCATCAATTATTATGCTTGTCTTCGGTTATCTAGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTTGTAATTGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCGAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCCGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGATGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTDVAAWHYFYMRDVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYLGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ927016 [IV-Alpha7-HOT2C01] clone_AT06007_DQ927016 gi|116294147|gb|DQ927016| Uncultured bacterium clone AT06007 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT06007 putative proteorhodopsin gene, partial cds. DQ927016 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGCTTGCCGCTACTGTTTTCTTCTTTCTTGAAAGGGATCGTGTAGCTGCTAAATGGAAAACGTCCCTAACAGTTGCTGGTTTGGTTACTGGTGTGGCGGCGTGGCACTATTTCTACATGAGAGATGTATGGGTAGCTACAGGTGATTCGCCAACAGTCCTTCGTTATATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTACTAATTGCATCAATTATTATGCTTGTCTTCGGTTATCTAGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTTGTAATTGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCGAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCCGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGCTGGGCAATCTACCCA MLAATVFFFLERDRVAAKWKTSLTVAGLVTGVAAWHYFYMRDVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYLGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACTGTTTTCTTCTTTCTTGAAAGGGATCGTGTAGCTGCT---AAATGGAAAACGTCCCTAACAGTTGCTGGTTTGGTTACTGGTGTGGCGGCGTGGCACTATTTCTACATGAGAGATGTATGGGTA------------------------------GCTACA---------------------GGTGATTCGCCAACAGTCCTTCGTTATATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTACTAATTGCATCAATTATTATGCTTGTCTTCGGTTATCTAGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTTGTAATTGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCGAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCCGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGCTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFLERDRVAA-KWKTSLTVAGLVTGVAAWHYFYMRDVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYLGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU916151 [IV-Alpha7-HOT2C01] clone_2M-13_EU916151 gi|229359176|gb|EU916151| Uncultured bacterium clone 2M-13 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 2M-13 putative proteorhodopsin gene, partial cds. EU916151 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTCGCCGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCTGCTAAATGGAAAACGTCCCTAACAGTTGCTGGTTTGGTTACTGGTGTGGCGGCGTGGCACTATTTCTACATGAGAGATGTATGGGTAGGTGATTCGCCAACAGTCCTTCGATATATTGACTGGTTGATTACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTATCTCGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTTGTAATTGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCGAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTGATTGTTACAGTAGGATGGGCAATTTAC MLAATVFFFLERDRVAAKWKTSLTVAGLVTGVAAWHYFYMRDVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYLGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTCGCCGCTACTGTATTCTTCTTTCTTGAAAGAGATCGTGTAGCTGCT---AAATGGAAAACGTCCCTAACAGTTGCTGGTTTGGTTACTGGTGTGGCGGCGTGGCACTATTTCTACATGAGAGATGTATGGGTA---------------------------------------------------------GGTGATTCGCCAACAGTCCTTCGATATATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTATCTCGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTTGTAATTGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCGAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTGATTGTTACAGTA---------------------------------------------------------------GGATGG---------GCAATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFLERDRVAA-KWKTSLTVAGLVTGVAAWHYFYMRDVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYLGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ927014 [IV-Alpha7-HOT2C01] clone_AT06005_DQ927014 gi|116294143|gb|DQ927014| Uncultured bacterium clone AT06005 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT06005 putative proteorhodopsin gene, partial cds. DQ927014 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGGTCGCCGCTACTGTGTTCTTCTTTCTTGAGAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTAGCTACAGGTGATTCGCCAACAGTCCTTCGTTATATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTACTAATTGCATCAATTATTATGCTTGTCTTCGGTTATCTAGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTTGTAATTGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCGAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCCGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTTGGATGGGCAATTTACCCA MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYLGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCCGCTACTGTGTTCTTCTTTCTTGAGAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTA------------------------------GCTACA---------------------GGTGATTCGCCAACAGTCCTTCGTTATATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTACTAATTGCATCAATTATTATGCTTGTCTTCGGTTATCTAGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTTGTAATTGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCGAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCCGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTT---------------------------------------------------------------GGATGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYLGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_1105078429517 [IV-Alpha7-HOT2C01] JCVI_ORF_1105078429517_GS000a_Open_Ocean_5m jcvi|1105078429517| 1105078429517 JCVI ORF 1105078429517 1105078429517 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 26-FEB-2003 Open_Ocean/5m_depth/S_36.7_psu/GS000a/Sargasso_Station_11/Sargasso_Sea Sargasso Sea marine 31.175 -64.32433 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATAAAATTAAGGGGGAAAATAAACATGAAAGTATTAATGCTAAATCCCGGAGATCAGGTAGCCATTTCGTTTTGGTTGATCTCTATGGCCATGGTTGCCGCTACTGCTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTCACAGTAGCTGGTTTGGTTACTGGTGTTGCGGCGTGGCACTATTTCTACATGAGAGATGTATGGGTAGCTACTGGTGACTCACCAACAGTCCTTCGTTATATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCGAGCCTTTTCTGGAGACTACTAATTGCATCAATTATTATGCTTGTCTTCGGTTATCTCGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTAGTAGTGGAAACGCTGCCGGTCAGACTGCATTTAATGCATTGAGATTAATTGTTACAGTCGGATGGGCAATTTATCCAATTGGTTATGCTGTAGGTTACTTCGGTGGCGGCGTAGACGCTGGCGCATTGAACTTAATCTATAACCTTGCGGACTTTGTTAATAAAATTGCATTTGGTATGGCTATTTATGTAGCTGCAGTATCAGACAGCAAC IKLRGKINMKVLMLNPGDQVAISFWLISMAMVAATAFFFLERDRVAAKWKTSLTVAGLVTGVAAWHYFYMRDVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYLGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASASSGNAAGQTAFNALRLIVTVGWAIYPIGYAVGYFGGGVDAGALNLIYNLADFVNKIAFGMAIYVAAVSDSN ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAAATTAAGGGGGAAAATAAACATGAAAGTATTAATGCTAAATCCCGGAGATCAGGTAGCCATTTCGTTTTGGTTGATCTCTATGGCCATGGTTGCCGCTACTGCTTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTCACAGTAGCTGGTTTGGTTACTGGTGTTGCGGCGTGGCACTATTTCTACATGAGAGATGTATGGGTA------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTATATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCG---AGCCTT------------------------------------TTCTGGAGA---CTACTAATTGCATCAATTATTATGCTTGTCTTCGGTTATCTCGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTAGT------AGT---GGAAACGCTGCCGGT---CAG---ACT---GCA---TTT---AAT---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGATGG---------GCAATTTATCCAATTGGTTATGCTGTAGGTTACTTCGGT---GGCGGC---------------------------GTAGACGCT---------GGCGCATTGAACTTAATCTATAACCTTGCGGACTTTGTTAATAAAATTGCATTTGGTATGGCTATTTATGTAGCTGCAGTATCAGAC---AGCAAC--------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------IKLRGKINMKVLMLNPGDQVAISFWLISMAMVAATAFFFLERDRVAA-KWKTSLTVAGLVTGVAAWHYFYMRDVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYLGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAS--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYPIGYAVGYFG-GG---------VDA---GALNLIYNLADFVNKIAFGMAIYVAAVSD-SN--------------------------------------- [IV-Alpha7-HOT2C01]_EU915940 [IV-Alpha7-HOT2C01] clone_13H01-8_EU915940 gi|229358762|gb|EU915940| Uncultured bacterium clone 13H01-8 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 13H01-8 putative proteorhodopsin gene, partial cds. EU915940 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTAGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTGTGGCGGCGTGGCACTATTTCTACATGAGAGATGTATGGGTAGGTGACTCACCAACAGTCCTTCGTTATATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTACTAATTGCATCAATTATTATGCTTGTCTTCGGTTATCTCGGTGAAGCTGGAGCGATGAGTGTATCTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTAGTAGTGGAAATGCTGCTGGTCAAACTGCATTTAACGCATTGAGATTGATTGTTACTGTAGGCTGGGCCATTTAC MVAATVFFFLERDRVAAKWKTSLTVAGLVTGVAAWHYFYMRDVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYLGEAGAMSVSLAFVIGMAGWLYIIYEVFAGEASKASASSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTGTGGCGGCGTGGCACTATTTCTACATGAGAGATGTATGGGTA---------------------------------------------------------GGTGACTCACCAACAGTCCTTCGTTATATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTACTAATTGCATCAATTATTATGCTTGTCTTCGGTTATCTCGGTGAA---------GCT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AGTGTA------------------TCTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTAGT------AGT---GGAAATGCTGCTGGT---CAA---ACT---GCA---TTT---AAC---GCATTG---AGATTGATTGTTACTGTA---------------------------------------------------------------GGCTGG---------GCCATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGVAAWHYFYMRDVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYLGE---A------G--A-----------M----------------------SV------SLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAS--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU079227 [IV-Alpha7-HOT2C01] NASB_95_env_samples_EU079227 gi|156106613|gb|EU079227| Uncultured organism clone NASB 95 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 95 putative proteorhodopsin gene, partial cds EU079227 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTATATGGGTGAAACTGGAGCGATGAATGTAACTCTGGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGAAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGCTGGGCAATCTAT RYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTATATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTGGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGA------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGCTGG---------GCAATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU916076 [IV-Alpha7-HOT2C01] clone_A150008_EU916076 gi|229359033|gb|EU916076| Uncultured bacterium clone A150008 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A150008 putative proteorhodopsin gene, partial cds. EU916076 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTCGCCGCTACTGCCTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTATTTCTACATGAGAGGCGTGTGGGTTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTCGTCTTCGGTTATATGGGTGAAACTGGAGCGATGAATGTAACTTTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGGAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGTTGGGCTATCTAC MVAATAFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVGDSPTVLRYIDWLITVPLQIVEFYVILAAMAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEGSKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCCGCTACTGCCTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTATTTCTACATGAGAGGCGTGTGGGTT---------------------------------------------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG------GCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTCGTCTTCGGTTATATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTTTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGGAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGTTGG---------GCTATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV-------------------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M--AVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEGSKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU079179 [IV-Alpha7-HOT2C01] NASB_35_env_samples_EU079179 gi|156106518|gb|EU079179| Uncultured organism clone NASB 35 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 35 putative proteorhodopsin gene, partial cds EU079179 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGTTATGTAGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCTGGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTATATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATACATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTAGGATGGGCAATCTAC RYVDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTATGTAGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCT---GGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTATATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATACATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGATGG---------GCAATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EF079845 [IV-Alpha7-HOT2C01] clone_ID11016_EF079845 gi|126361779|gb|EF079845| Uncultured bacterium clone ID11016 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID11016 putative proteorhodopsin gene, partial cds. EF079845 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na #na Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGGTTGCCGCTACTGTGTTCTTCTTTCTAGAAAGAGATCGTGTAGCAGCTAAATGGAAGACGTCCCTTACTGTAGCTGGTTTAGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCAATGACTGCTGTTGCTTCTGGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTATATGGGCGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATACATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTAGGATGGGCGATATACCCA MVAATVFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTGTTCTTCTTTCTAGAAAGAGATCGTGTAGCAGCT---AAATGGAAGACGTCCCTTACTGTAGCTGGTTTAGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCA---------ATG---ACTGCTGTTGCTTCT---GGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTATATGGGCGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATACATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGATGG---------GCGATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EF079856 [IV-Alpha7-HOT2C01] clone_ID11054_EF079856 gi|126361801|gb|EF079856| Uncultured bacterium clone ID11054 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID11054 putative proteorhodopsin gene, partial cds. EF079856 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na #na Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGGTCGCCGCTACTGCGTTCTTCTTTCTAGAAAGAGATCGTGTAGCAGCTAAATGGAAGACGTCCCTTACTGTAGCTGGCTTAGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCACCAACAGTCCTTCGTTACATTGACTGGTTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCAATGACTGCTGTTGCTTCTGGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTATATGGGTGGAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATAGCTGGATGGTTATACATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTAGGGTGGGCCATTTACCCA MVAATAFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASGLFWRLLIASIIMLVFGYMGGTGAMNVTLAFVIGIAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCCGCTACTGCGTTCTTCTTTCTAGAAAGAGATCGTGTAGCAGCT---AAATGGAAGACGTCCCTTACTGTAGCTGGCTTAGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTCCTTCGTTACATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCA---------ATG---ACTGCTGTTGCTTCT---GGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTATATGGGTGGA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATAGCTGGATGGTTATACATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGGTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIIMLVFGYMGG---T------G--A-----------M----------------------NV------TLA-FVIGIAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_DQ203804 [IV-Alpha7-HOT2C01] SS114a40B12_env_samples_DQ203804 gi|77548056|gb|DQ203804| Uncultured bacterium clone SS114a40B12 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40B12 predicted proteorhodopsin gene, partial cds DQ203804 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATGGACTGGCTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTATATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATACATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTGATTGTTACAGTAGGGTGGGCGATCTATCCA SYMDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATGGACTGG------------------------CTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTATATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATACATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTGATTGTTACAGTA---------------------------------------------------------------GGGTGG---------GCGATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYMDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915739 [IV-Alpha7-HOT2C01] APF9029_env_samples_EU915739 gi|229358360|gb|EU915739| Uncultured microorganism clone APF9029 putative proteorhodopsin gene, partial cds Uncultured microorganism clone APF9029 putative proteorhodopsin gene, partial cds EU915739 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample_at_75_m_depth Atlantic Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGCCTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCTCCAACAGTCCTTCGTTATATTGACTGGTTGATTACTGTGCCTCTACAAATTGTAGAATTCTACGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATACATCATCTATGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGGTGGGCCCTCTAT MVAATAFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWALY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCCTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCTCCAACAGTCCTTCGTTATATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATTGTAGAATTCTACGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATACATCATCTATGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGGTGG---------GCCCTCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---ALY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EF088532 [IV-Alpha7-HOT2C01] clone_APF9029_EF088532 gi|126843281|gb|EF088532| Uncultured bacterium clone APF9029 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone APF9029 putative proteorhodopsin gene, partial cds. EF088532 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na 75m water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTGGCCGCTACTGCCTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTTGCTACTGGTGACTCTCCAACAGTCCTTCGTTATATTGACTGGTTGATTACTGTGCCTCTACAAATTGTAGAATTCTACGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATACATCATCTATGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTCGGGTGGGCCCTCTATCCA MVAATAFFFLERDRVAAKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWALYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCCTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTTACAGTAGCTGGTTTGGTTACTGGTATTGCGGCGTGGCACTACTTCTACATGAGAGGCGTATGGGTT------------------------------GCTACT---------------------GGTGACTCTCCAACAGTCCTTCGTTATATTGACTGG------------------------TTGATTACTGTGCCTCTACAAATTGTAGAATTCTACGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATACATCATCTATGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC---------------------------------------------------------------GGGTGG---------GCCCTCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLERDRVAA-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---ALYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EU915736 [IV-Alpha7-HOT2C01] APF9010_env_samples_EU915736 gi|229358354|gb|EU915736| Uncultured microorganism clone APF9010 putative proteorhodopsin gene, partial cds Uncultured microorganism clone APF9010 putative proteorhodopsin gene, partial cds EU915736 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample_at_75_m_depth Atlantic Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACAGTCTTCTTCTTTCTTGAGAGAGATCGTGTAGCTGCTAAATGGAAAACGTCCCTAACAGTAGCTGGTTTGGTTACTGGTGTAGCGGCGTGGCACTATTTCTATATGAGAGATGTATGGGTTGCTACTGGTGACTCACCAACAGTACTTCGATATATTGATTGGTTAATTACTGTGCCTCTACAAATTGTAGAATTCTACGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGTCTTTTCTGGAGACCATTAATTGCATCAATTATTATGCTTGTTGGTGGTTATCTGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGCGGAAACGCTGCTGGTCAGACTGCATTTAACGCGTTGAGATTAATTGTTACAGTAGGGTGGGCCATCTAC MVAATVFFFLERDRVAAKWKTSLTVAGLVTGVAAWHYFYMRDVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRPLIASIIMLVGGYLGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACAGTCTTCTTCTTTCTTGAGAGAGATCGTGTAGCTGCT---AAATGGAAAACGTCCCTAACAGTAGCTGGTTTGGTTACTGGTGTAGCGGCGTGGCACTATTTCTATATGAGAGATGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTACTTCGATATATTGATTGG------------------------TTAATTACTGTGCCTCTACAAATTGTAGAATTCTACGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGTCTT------------------------------------TTCTGGAGA---CCATTAATTGCATCAATTATTATGCTTGTTGGTGGTTATCTGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGC---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCGTTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGGTGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGVAAWHYFYMRDVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-PLIASIIMLVGGYLGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EF088529 [IV-Alpha7-HOT2C01] clone_APF9010_EF088529 gi|126843275|gb|EF088529| Uncultured bacterium clone APF9010 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone APF9010 putative proteorhodopsin gene, partial cds. EF088529 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na 75m water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTGGCCGCTACAGTCTTCTTCTTTCTTGAGAGAGATCGTGTAGCTGCTAAATGGAAAACGTCCCTAACAGTAGCTGGTTTGGTTACTGGTGTAGCGGCGTGGCACTATTTCTATATGAGAGATGTATGGGTTGCTACTGGTGACTCACCAACAGTACTTCGATATATTGATTGGTTAATTACTGTGCCTCTACAAATTGTAGAATTCTACGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGTCTTTTCTGGAGACCATTAATTGCATCAATTATTATGCTTGTTGGTGGTTATCTGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGCGGAAACGCTGCTGGTCAGACTGCATTTAACGCGTTGAGATTAATTGTTACAGTAGGGTGGGCCATCTACCCA MVAATVFFFLERDRVAAKWKTSLTVAGLVTGVAAWHYFYMRDVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAMTAVASSLFWRPLIASIIMLVGGYLGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACAGTCTTCTTCTTTCTTGAGAGAGATCGTGTAGCTGCT---AAATGGAAAACGTCCCTAACAGTAGCTGGTTTGGTTACTGGTGTAGCGGCGTGGCACTATTTCTATATGAGAGATGTATGGGTT------------------------------GCTACT---------------------GGTGACTCACCAACAGTACTTCGATATATTGATTGG------------------------TTAATTACTGTGCCTCTACAAATTGTAGAATTCTACGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGTCTT------------------------------------TTCTGGAGA---CCATTAATTGCATCAATTATTATGCTTGTTGGTGGTTATCTGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGC---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCGTTG---AGATTAATTGTTACAGTA---------------------------------------------------------------GGGTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGVAAWHYFYMRDVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-PLIASIIMLVGGYLGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_EF100812 [IV-Alpha7-HOT2C01] clone_ID29059_EF100812 gi|126513403|gb|EF100812| Uncultured bacterium clone ID29059 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID29059 putative proteorhodopsin gene, partial cds. EF100812 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-nov-07 #na surface water Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGGTCGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCTAAATGGAAAACGTCCCTCACAGTAGCTGGTTTGGTTACTGGTGTAGCGGCGTGGCACTACTTCTATATGAGAGGCGTATGGGTTGCTACAGGTGACTCACCAACAGTCCTAAGATATATTGACTGGTTGATTACAGTGCCTCTACAAATTATAGAGTTCTATGTAATTCTAGCAGCAATGACAGCTGTTGCTTCAAGCCTTTTCTGGAGACTTTTGATCGCTTCTTTGATCATGCTTGTTTTTGGATACATGGGTGAAACTGGAGCAATGAATGTAACTCTGGCTTTTGTTATTTCAATGGCTGGTTGGTTATATATCATCTATGAAATTTTTGCAGGTGAGGCAAGTAAAGCAAGTGCTGGTAGTGGAAACGCTGCTGGCCAAGCTGCATTTAACGCCTTGAGATTAATCGTTACAGTAGGCTGGGCGATCTACCCA MVAATVFFFLERDRVAAKWKTSLTVAGLVTGVAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIIEFYVILAAMTAVASSLFWRLLIASLIMLVFGYMGETGAMNVTLAFVISMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCCGCTACTGTGTTCTTCTTTCTTGAAAGAGATCGTGTAGCAGCT---AAATGGAAAACGTCCCTCACAGTAGCTGGTTTGGTTACTGGTGTAGCGGCGTGGCACTACTTCTATATGAGAGGCGTATGGGTT------------------------------GCTACA---------------------GGTGACTCACCAACAGTCCTAAGATATATTGACTGG------------------------TTGATTACAGTGCCTCTACAAATTATAGAGTTCTATGTAATTCTAGCAGCA---------ATG---ACAGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTTTTGATCGCTTCTTTGATCATGCTTGTTTTTGGATACATGGGTGAA---------ACT------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTGGCT---TTTGTTATTTCAATGGCTGGTTGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGTGAGGCAAGTAAAGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGC---CAA---GCT---GCA---TTT---AAC---GCCTTG---AGATTAATCGTTACAGTA---------------------------------------------------------------GGCTGG---------GCGATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAA-KWKTSLTVAGLVTGVAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIIEFYVILAA---M-TAVAS-SL------------FWR-LLIASLIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVISMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_1105125611704 [IV-Alpha7-HOT2C01] JCVI_ORF_1105125611704_GS031_Coastal_upwelling_12m jcvi|1105125611704| 1105125611704 JCVI ORF 1105125611704 1105125611704 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 10-FEB-2004 Coastal_upwelling/12m_depth/S_n.a/GS031/Upwelling/Fernandina_Island/Galapagos_Islands Pacific Ocean marine -0.3011111 -91.651665 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATTAAAGGGGATTTATTTATGTCCAAAGTTTTAATTCTTGACCCTAGTGATCCAGTAGCAATTTCCTTTTGGCTGATTTCTATGGCAATGGTAGCTGCAACTGCATTTTTCTTTTTAGAAAGAGACCGTGTATCTGCAAAATGGAAAACATCACTTACTATCGCTGGCTTAGTTACTGGTGTTGCGGCTGTTCACTACTTCTATATGCGTGGCGTATGGGTAGCTGGAGAAGGCTCACCCACAGTACTCCGATATATTGACTGGCTGATTACAGTACCTTTACAAATTATAGAGTTTTATGTAATTCTTGCTGCAGTAACAGCTGTAGCTGTAGGCTTGTTCTGGAGATTGCTTACTGCATCTCTAATAATGCTTATTTTTGGTTATATGGGTGAAACAGGTGCAATGGGAGCAGCTTTAGCCTTTGTTATTGGAATGGCAGCATGGTTGTACATTGTTTACGAAGTTTTTGCAGGAGAAGCTAGTAAGGTGAATACTGAAAGTGGAAATGATGCTTCGCAAACAGCTTTTAGTGCTTTGAGAATAATTGTTACTGTTGGATGGGCAATCTATCCACTTGGTTATGCAGTTGTTTTCATAGGTGGACTTGATGCTGCATCAATTGAAGGCTCGATGAATTTGATATATAACCTTGCAGACTTTGTAAATAAAATTGCATTTGGTATGGCTATTTATGTAGCTGCAATATCTGATAGCAAACAA IKGDLFMSKVLILDPSDPVAISFWLISMAMVAATAFFFLERDRVSAKWKTSLTIAGLVTGVAAVHYFYMRGVWVAGEGSPTVLRYIDWLITVPLQIIEFYVILAAVTAVAVGLFWRLLTASLIMLIFGYMGETGAMGAALAFVIGMAAWLYIVYEVFAGEASKVNTESGNDASQTAFSALRIIVTVGWAIYPLGYAVVFIGGLDAASIEGSMNLIYNLADFVNKIAFGMAIYVAAISDSKQ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAAAGGGGATTTATTTATGTCCAAAGTTTTAATTCTTGACCCTAGTGATCCAGTAGCAATTTCCTTTTGGCTGATTTCTATGGCAATGGTAGCTGCAACTGCATTTTTCTTTTTAGAAAGAGACCGTGTATCTGCA---AAATGGAAAACATCACTTACTATCGCTGGCTTAGTTACTGGTGTTGCGGCTGTTCACTACTTCTATATGCGTGGCGTATGGGTA------------------------------GCTGGA---------------------GAAGGCTCACCCACAGTACTCCGATATATTGACTGG------------------------CTGATTACAGTACCTTTACAAATTATAGAGTTTTATGTAATTCTTGCTGCA---------GTA---ACAGCTGTAGCTGTA---GGCTTG------------------------------------TTCTGGAGA---TTGCTTACTGCATCTCTAATAATGCTTATTTTTGGTTATATGGGTGAA---------ACA------------------GGT------GCA---------------------------------ATG------------------------------------------------------------------GGAGCA------------------GCTTTAGCC---TTTGTTATTGGAATGGCAGCATGGTTGTACATTGTTTACGAAGTT---------------TTT------GCA---GGAGAAGCTAGTAAGGTGAATACTGAA------AGT---GGAAATGATGCTTCG---CAA---ACA---GCT---TTT---AGT---GCTTTG---AGAATAATTGTTACTGTT---------------------------------------------------------------GGATGG---------GCAATCTATCCACTTGGTTATGCAGTTGTTTTCATAGGT---GGACTT---------------------------GATGCTGCATCAATTGAAGGCTCGATGAATTTGATATATAACCTTGCAGACTTTGTAAATAAAATTGCATTTGGTATGGCTATTTATGTAGCTGCAATATCTGAT---AGCAAACAA------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------IKGDLFMSKVLILDPSDPVAISFWLISMAMVAATAFFFLERDRVSA-KWKTSLTIAGLVTGVAAVHYFYMRGVWV----------AG-------EGSPTVLRYIDW--------LITVPLQIIEFYVILAA---V-TAVAV-GL------------FWR-LLTASLIMLIFGYMGE---T------G--A-----------M----------------------GA------ALA-FVIGMAAWLYIVYEV-----F--A-GEASKVNTE--S-GNDAS-Q-T-A-F-S-AL-RIIVTV---------------------GW---AIYPLGYAVVFIG-GL---------DAASIEGSMNLIYNLADFVNKIAFGMAIYVAAISD-SKQ-------------------------------------- [IV-Alpha7-HOT2C01]_1105091852198 [IV-Alpha7-HOT2C01] JCVI_ORF_1105091852198_GS031_Coastal_upwelling_12m jcvi|1105091852198| 1105091852198 JCVI ORF 1105091852198 1105091852198 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 10-FEB-2004 Coastal_upwelling/12m_depth/S_n.a/GS031/Upwelling/Fernandina_Island/Galapagos_Islands Pacific Ocean marine -0.3011111 -91.651665 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf AGCCTGTACAGTGATCACGTAGCCATTACCTTTTGGCTGATCTCTATGGCCATGGTAGCTGCAACTGCCTTTTTCTTTTTAGAAAGAGACAGAGTAGCTGGTAAATGGAAAACGTCACTTACTGTAGCTGGTTTGGTTACTGGTATAGCGGCGTGGCACTACTTCTATATGAGAGGTGTATGGGTAGCTACTGGGGATTCACCTACAGTACTTCGATACATTGACTGGTTAATTACAGTACCTCTTCAAATTGTTGAATTTTACGTAATTCTTGCTGCTGTGACTACTGTAGCTGTTGGCCTATTCTGGAGATTGCTTGTTGCATCTCTAGTAATGCTTGTCTTCGGTTATGTTGGTGAAACGGGAGCATTGAATACAACTTTAGCATTTGTCATCGGAATGGCAGCTTGGTTGTATATCGTTTACGAAATTTTTGCAGGTGAAGCTAGCAAAGCGAATGCTGGAAGTGGAAATGCTGCTGGACAAGCAGCGTTTAACGCTTTGAGATTAATTGTTACAGTTGGATGGGCAATTTATCCGCTTGGTTATGCTATTGGTTATTTTGGCGGCGGCGTAGACGCTGGTAATCTTAACCTTATTTACAACGTTGCAGACTTTGTAAATAAAATTGCATTTGGTATGGCTATCTATGTAGCTGCTGTATCTGATAGCAAT SLYSDHVAITFWLISMAMVAATAFFFLERDRVAGKWKTSLTVAGLVTGIAAWHYFYMRGVWVATGDSPTVLRYIDWLITVPLQIVEFYVILAAVTTVAVGLFWRLLVASLVMLVFGYVGETGALNTTLAFVIGMAAWLYIVYEIFAGEASKANAGSGNAAGQAAFNALRLIVTVGWAIYPLGYAIGYFGGGVDAGNLNLIYNVADFVNKIAFGMAIYVAAVSDSN ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCCTGTACAGTGATCACGTAGCCATTACCTTTTGGCTGATCTCTATGGCCATGGTAGCTGCAACTGCCTTTTTCTTTTTAGAAAGAGACAGAGTAGCTGGT---AAATGGAAAACGTCACTTACTGTAGCTGGTTTGGTTACTGGTATAGCGGCGTGGCACTACTTCTATATGAGAGGTGTATGGGTA------------------------------GCTACT---------------------GGGGATTCACCTACAGTACTTCGATACATTGACTGG------------------------TTAATTACAGTACCTCTTCAAATTGTTGAATTTTACGTAATTCTTGCTGCT---------GTG---ACTACTGTAGCTGTT---GGCCTA------------------------------------TTCTGGAGA---TTGCTTGTTGCATCTCTAGTAATGCTTGTCTTCGGTTATGTTGGTGAA---------ACG------------------GGA------GCA---------------------------------TTG------------------------------------------------------------------AATACA------------------ACTTTAGCA---TTTGTCATCGGAATGGCAGCTTGGTTGTATATCGTTTACGAAATT---------------TTT------GCA---GGTGAAGCTAGCAAAGCGAATGCTGGA------AGT---GGAAATGCTGCTGGA---CAA---GCA---GCG---TTT---AAC---GCTTTG---AGATTAATTGTTACAGTT---------------------------------------------------------------GGATGG---------GCAATTTATCCGCTTGGTTATGCTATTGGTTATTTTGGC---GGCGGC---------------------------GTAGACGCT---------GGTAATCTTAACCTTATTTACAACGTTGCAGACTTTGTAAATAAAATTGCATTTGGTATGGCTATCTATGTAGCTGCTGTATCTGAT---AGCAAT--------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------SLYSDHVAITFWLISMAMVAATAFFFLERDRVAG-KWKTSLTVAGLVTGIAAWHYFYMRGVWV----------AT-------GDSPTVLRYIDW--------LITVPLQIVEFYVILAA---V-TTVAV-GL------------FWR-LLVASLVMLVFGYVGE---T------G--A-----------L----------------------NT------TLA-FVIGMAAWLYIVYEI-----F--A-GEASKANAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYPLGYAIGYFG-GG---------VDA---GNLNLIYNVADFVNKIAFGMAIYVAAVSD-SN--------------------------------------- [IV-Alpha7-HOT2C01]_EU079206 [IV-Alpha7-HOT2C01] NASB_67_env_samples_EU079206 gi|156106572|gb|EU079206| Uncultured organism clone NASB 67 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 67 putative proteorhodopsin gene, partial cds EU079206 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGTTACATAGACTGGTTAATTACAGTACCTCTTCAAATTGTTGAATTTTACGTAATTCTTGCAGCTGTTACTACTGTAGCCGTTGGCTTGTTCTGGAGACTACTTATTGCTTCTCTAGTTATGCTTGTCTTTGGTTATGTAGGTGAAACAGGCGCATTGAATGTAACTCTAGCATTTGTCATCGCAATGGCAGCTTGGTTATATATCGTTTACGAAATTTTTGCAGGTGAAGCTAGCAAAGCGAATGCTTCAAGTGGGAATGCTGCTGGTCAAGCAGCGTTCAACGCTTTGAGATTAATTGTTACAGTTGGATGGGCTATCTAC RYIDWLITVPLQIVEFYVILAAVTTVAVGLFWRLLIASLVMLVFGYVGETGALNVTLAFVIAMAAWLYIVYEIFAGEASKANASSGNAAGQAAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTACATAGACTGG------------------------TTAATTACAGTACCTCTTCAAATTGTTGAATTTTACGTAATTCTTGCAGCT---------GTT---ACTACTGTAGCCGTT---GGCTTG------------------------------------TTCTGGAGA---CTACTTATTGCTTCTCTAGTTATGCTTGTCTTTGGTTATGTAGGTGAA---------ACA------------------GGC------GCA---------------------------------TTG------------------------------------------------------------------AATGTA------------------ACTCTAGCA---TTTGTCATCGCAATGGCAGCTTGGTTATATATCGTTTACGAAATT---------------TTT------GCA---GGTGAAGCTAGCAAAGCGAATGCTTCA------AGT---GGGAATGCTGCTGGT---CAA---GCA---GCG---TTC---AAC---GCTTTG---AGATTAATTGTTACAGTT---------------------------------------------------------------GGATGG---------GCTATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---V-TTVAV-GL------------FWR-LLIASLVMLVFGYVGE---T------G--A-----------L----------------------NV------TLA-FVIAMAAWLYIVYEI-----F--A-GEASKANAS--S-GNAAG-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_DQ927019 [IV-Proteo3-HF10_19P19] clone_AT06012_DQ927019 gi|116294153|gb|DQ927019| Uncultured bacterium clone AT06012 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT06012 putative proteorhodopsin gene, partial cds. DQ927019 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGGTAGCCGCTACAGCATTCTTCTTGATGGAATCATTGAGAGTTGACGGCAAGTGGAGAACGTCAATGATTGTGGGCGGACTAGTTACACTTGTAGCTGCGGTCCACTACTTTTATATGCGTGATGTTTGGGTTGCCACCGGTGCATCGCCTACGGTCTTTCGTTATGTAGATTGGCTAATCACGGTGCCTCTGCAGATGATTGAATTCTACCTTATTTTAGCAGCCTGTACTGCCATTGCCGTTGGTGTATTCTGGCGCCTCATGATCGGTACAATGGTGATGTTAGTGGGCGGATATTTAGGCGAGGCTGGTTTCATTAACGCTACGGTTGGTTTCGTGATCGGAATGGCCGGTTGGGGATATATATTGTATGAAATCTTTGCTGGTGAAGCTGGCAAGGTTGCTGCAGAAGGTGCACCCCCATCTGTGCAATCAGCTTTCAACACGATGCGTCTGATCGTGACCATTGGGTGGGCGATCTATCCA MVAATAFFLMESLRVDGKWRTSMIVGGLVTLVAAVHYFYMRDVWVATGASPTVFRYVDWLITVPLQMIEFYLILAACTAIAVGVFWRLMIGTMVMLVGGYLGEAGFINATVGFVIGMAGWGYILYEIFAGEAGKVAAEGAPPSVQSAFNTMRLIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACAGCATTCTTCTTGATGGAATCATTGAGAGTTGACGGC---AAGTGGAGAACGTCAATGATTGTGGGCGGACTAGTTACACTTGTAGCTGCGGTCCACTACTTTTATATGCGTGATGTTTGGGTT------------------------------GCCACC---------------------GGTGCATCGCCTACGGTCTTTCGTTATGTAGATTGG------------------------CTAATCACGGTGCCTCTGCAGATGATTGAATTCTACCTTATTTTAGCAGCC---------TGT---ACTGCCATTGCCGTT---GGTGTA------------------------------------TTCTGGCGC---CTCATGATCGGTACAATGGTGATGTTAGTGGGCGGATATTTAGGCGAG---------GCT------------------GGT------TTC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACGGTTGGT---TTCGTGATCGGAATGGCCGGTTGGGGATATATATTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTTGCTGCAGAA------GGT---GCACCCCCATCTGTG---CAA---TCA---GCT---TTC---AAC---ACGATG---CGTCTGATCGTGACCATT---------------------------------------------------------------GGGTGG---------GCGATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFLMESLRVDG-KWRTSMIVGGLVTLVAAVHYFYMRDVWV----------AT-------GASPTVFRYVDW--------LITVPLQMIEFYLILAA---C-TAIAV-GV------------FWR-LMIGTMVMLVGGYLGE---A------G--F-----------I----------------------NA------TVG-FVIGMAGWGYILYEI-----F--A-GEAGKVAAE--G-APPSV-Q-S-A-F-N-TM-RLIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_EF100190 [IV-Proteo3-HF10_19P19] HF10_19P19_genomic_EF100190 gi|119094107|gb|EF100190| Uncultured marine bacterium HF10 19P19 genomic sequence Uncultured marine bacterium HF10 19P19 genomic sequence EF100190 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:413067 genomic_DNA other 02APR2008 #na North_Pacific_Subtropical_Gyre/Hawaii_Ocean_Time_Series_Station_ALOHA/10m_below_sea_surface Pacific Ocean marine 22.75 -158 Proteorhodopsin photosystem gene expression enables photophosphorylation in a heterologous host Martinez,A., Bradley,A.S., Waldbauer,J.R., Summons,R.E. and Delong,E.F. Proc. Natl. Acad. Sci. U.S.A. 104 (13), 55905595 (2007) 17372221 #na ATGTCAATAATTAAGTCTTTAAAGTCAGTCGCTATTGCATCACTGGCTATTCTCATTCCATCAATTGCATTAGCAGCTGGTGGAAACTTGGAGCCGAACGATCCTGTCGGCATTACCTTTTGGTTGATATCGATCGCAATGGTCGCCGCTACCGTATTTTTCTTGATGGAATCATTGAGAGTTGACGGCAAGTGGAGAACATCAATGATTGTGGGCGGACTTGTTACACTAGTAGCTGCGGTCCACTACTTTTATATGCGTGATGTTTGGGTTGCCACAGGTGCATCGCCCACGGTCTTTCGTTATGTAGATTGGCTAATCACAGTGCCTCTGCAGATGATTGAATTCTACCTTATTTTAGCTGCTTGCACTGCCATTGCTGTCGGCGTCTTCTGGCGCCTCATGATCGGCACAATGGTAATGTTAATTGGCGGATATCTAGGTGAGGCGGGCTTCATCAACGCTACGGTTGGTTTCGTGATCGGAATGGCCGGTTGGGGATATATATTGTATGAAATCTTTGCTGGTGAAGCTGGCAAGGTTGCTGCAGAAGGTGCGCCCCCATCTGTACAATCAGCTTTCAACACAATGCGTCTGATTGTGACTATTGGTTGGGCTATTTATCCACTTGGATATTTCTTTGGCTACATGACCGGAGGAGTTGACGCAAATTCGCTGAACCTGATCTACAACGTTGCTGACGTTGTTAACAAGATTGGTTTCTGTTTAGCAATTTGGGCTGCTGCTACTTCACAATCTGAAGCGGCAAAG MSIIKSLKSVAIASLAILIPSIALAAGGNLEPNDPVGITFWLISIAMVAATVFFLMESLRVDGKWRTSMIVGGLVTLVAAVHYFYMRDVWVATGASPTVFRYVDWLITVPLQMIEFYLILAACTAIAVGVFWRLMIGTMVMLIGGYLGEAGFINATVGFVIGMAGWGYILYEIFAGEAGKVAAEGAPPSVQSAFNTMRLIVTIGWAIYPLGYFFGYMTGGVDANSLNLIYNVADVVNKIGFCLAIWAAATSQSEAAK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTCAATAATTAAGTCTTTAAAGTCAGTCGCTATTGCATCACTGGCTATTCTCATTCCATCAATTGCATTAGCAGCTGGTGGAAACTTGGAGCCGAACGATCCTGTCGGCATTACCTTTTGGTTGATATCGATCGCAATGGTCGCCGCTACCGTATTTTTCTTGATGGAATCATTGAGAGTTGACGGC---AAGTGGAGAACATCAATGATTGTGGGCGGACTTGTTACACTAGTAGCTGCGGTCCACTACTTTTATATGCGTGATGTTTGGGTT------------------------------GCCACA---------------------GGTGCATCGCCCACGGTCTTTCGTTATGTAGATTGG------------------------CTAATCACAGTGCCTCTGCAGATGATTGAATTCTACCTTATTTTAGCTGCT---------TGC---ACTGCCATTGCTGTC---GGCGTC------------------------------------TTCTGGCGC---CTCATGATCGGCACAATGGTAATGTTAATTGGCGGATATCTAGGTGAG---------GCG------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACGGTTGGT---TTCGTGATCGGAATGGCCGGTTGGGGATATATATTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTTGCTGCAGAA------GGT---GCGCCCCCATCTGTA---CAA---TCA---GCT---TTC---AAC---ACAATG---CGTCTGATTGTGACTATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCACTTGGATATTTCTTTGGCTACATG---------------------------------------ACCGGAGGAGTTGACGCAAATTCGCTGAACCTGATCTACAACGTTGCTGACGTTGTTAACAAGATTGGTTTCTGTTTAGCAATTTGGGCTGCTGCTACTTCACAA---TCTGAAGCGGCAAAG------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------MSIIKSLKSVAIASLAILIPSIALAAGGNLEPNDPVGITFWLISIAMVAATVFFLMESLRVDG-KWRTSMIVGGLVTLVAAVHYFYMRDVWV----------AT-------GASPTVFRYVDW--------LITVPLQMIEFYLILAA---C-TAIAV-GV------------FWR-LMIGTMVMLIGGYLGE---A------G--F-----------I----------------------NA------TVG-FVIGMAGWGYILYEI-----F--A-GEAGKVAAE--G-APPSV-Q-S-A-F-N-TM-RLIVTI---------------------GW---AIYPLGYFFGYM-------------TGGVDANSLNLIYNVADVVNKIGFCLAIWAAATSQ-SEAAK------------------------------------ [IV-Proteo3-HF10_19P19]_1105079410804 [IV-Proteo3-HF10_19P19] JCVI_ORF_1105079410804_GS022_Open_Ocean_2m jcvi|1105079410804| 1105079410804 JCVI ORF 1105079410804 1105079410804 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 20-janv-04 Open_Ocean/2m_depth/S_32.3_psu/GS022/250_miles_from_Panama_City/Eastern_Tropical_Pacific Pacific Ocean marine 6.492778 -82.90389 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGTCAATAATTAAGTCTTTAAAGTCAGTCGCTATTGCGTCACTGGCTATTCTTATTCCTTCAATTGCATTAGCAGCTGGTGGGAACTTGGAGCCGAACGATCCTGTCGGCATTACCTTTTGGTTAATTTCGATCGCAATGGTCGCCGCTACCGTATTTTTCTTGATGGAATCATTAAGAGTCGACGGCAAGTGGAGGACATCAATGATTGTGGGCGGACTTGTTACACTCGTAGCTGCGGTCCACTACTTTTATATGCGTGATGTCTGGGTTGCCACAGGTGCATCGCCTACGGTCTTTCGTTATGTAGATTGGCTAATCACAGTGCCTCTGCAGATGATTGAATTCTACCTTATTCTAGCTGCCTGTACAGCCATTGCTGTTGGCGTCTTCTGGCGCCTCATGATCGGTACTATGGTAATGTTGGTTGGCGGATATTTAGGTGAGGCTGGTTTCATCAACTCTACGGTTGGTTTCGTGATCGGAATGGCCGGTTGGGGATATATTCTGTATGAAATCTTTGCTGGCGAAGCTGGTAAAGTTGCTGCAGACAGCGCTCCTGCCTCCGTGCAATCAGCGTTCAACACGATGCGTCTGATTGTGACTATTGGTTGGGCCATCTATCCACTTGGATATTTCTTTGGCTACATGACTGGAGGCGTTGACGCCAATTCGCTGAACCTGATCTACAACGTTGCTGACGTTGTTAACAAGATCGGCTTCTGTCTAGCGATTTGGGCGGCTGCTACTTCACAATCTGAAGCTGCAAAG MSIIKSLKSVAIASLAILIPSIALAAGGNLEPNDPVGITFWLISIAMVAATVFFLMESLRVDGKWRTSMIVGGLVTLVAAVHYFYMRDVWVATGASPTVFRYVDWLITVPLQMIEFYLILAACTAIAVGVFWRLMIGTMVMLVGGYLGEAGFINSTVGFVIGMAGWGYILYEIFAGEAGKVAADSAPASVQSAFNTMRLIVTIGWAIYPLGYFFGYMTGGVDANSLNLIYNVADVVNKIGFCLAIWAAATSQSEAAK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTCAATAATTAAGTCTTTAAAGTCAGTCGCTATTGCGTCACTGGCTATTCTTATTCCTTCAATTGCATTAGCAGCTGGTGGGAACTTGGAGCCGAACGATCCTGTCGGCATTACCTTTTGGTTAATTTCGATCGCAATGGTCGCCGCTACCGTATTTTTCTTGATGGAATCATTAAGAGTCGACGGC---AAGTGGAGGACATCAATGATTGTGGGCGGACTTGTTACACTCGTAGCTGCGGTCCACTACTTTTATATGCGTGATGTCTGGGTT------------------------------GCCACA---------------------GGTGCATCGCCTACGGTCTTTCGTTATGTAGATTGG------------------------CTAATCACAGTGCCTCTGCAGATGATTGAATTCTACCTTATTCTAGCTGCC---------TGT---ACAGCCATTGCTGTT---GGCGTC------------------------------------TTCTGGCGC---CTCATGATCGGTACTATGGTAATGTTGGTTGGCGGATATTTAGGTGAG---------GCT------------------GGT------TTC---------------------------------ATC------------------------------------------------------------------AACTCT------------------ACGGTTGGT---TTCGTGATCGGAATGGCCGGTTGGGGATATATTCTGTATGAAATC---------------TTT------GCT---GGCGAAGCTGGTAAAGTTGCTGCAGAC------AGC---GCTCCTGCCTCCGTG---CAA---TCA---GCG---TTC---AAC---ACGATG---CGTCTGATTGTGACTATT---------------------------------------------------------------GGTTGG---------GCCATCTATCCACTTGGATATTTCTTTGGCTACATG---------------------------------------ACTGGAGGCGTTGACGCCAATTCGCTGAACCTGATCTACAACGTTGCTGACGTTGTTAACAAGATCGGCTTCTGTCTAGCGATTTGGGCGGCTGCTACTTCACAA---TCTGAAGCTGCAAAG------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------MSIIKSLKSVAIASLAILIPSIALAAGGNLEPNDPVGITFWLISIAMVAATVFFLMESLRVDG-KWRTSMIVGGLVTLVAAVHYFYMRDVWV----------AT-------GASPTVFRYVDW--------LITVPLQMIEFYLILAA---C-TAIAV-GV------------FWR-LMIGTMVMLVGGYLGE---A------G--F-----------I----------------------NS------TVG-FVIGMAGWGYILYEI-----F--A-GEAGKVAAD--S-APASV-Q-S-A-F-N-TM-RLIVTI---------------------GW---AIYPLGYFFGYM-------------TGGVDANSLNLIYNVADVVNKIGFCLAIWAAATSQ-SEAAK------------------------------------ [IV-Proteo3-HF10_19P19]_1105080321154 [IV-Proteo3-HF10_19P19] JCVI_ORF_1105080321154_GS027_Coastal_3m jcvi|1105080321154| 1105080321154 JCVI ORF 1105080321154 1105080321154 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 04-FEB-2004 Coastal/3m_depth/S_34.9_psu/GS027/Devils_Crown/Floreana_Island/Galapagos_Islands Pacific Ocean marine -1.2161111 -90.422775 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGTCAATACTTAAGTCGTTAAAGTCAGTCGCTATCGCGTCACTGGCATTACTTATCCCATCAATTGCATTAGCAGCTGGTGGAAACTTAGAGCCGAACGATCCTGTCGGCATTACGTTTTGGTTGATCTCGATCGCAATGGTCGCCGCTACTGTTTTCTTCTTAATGGAGTCATTGAGAGTTGATGGCAAGTGGAGAACATCACTGATTGTTGGTGGTCTGGTCACACTTGTCGCTGCTGTACACTATTTCTACATGAGAGATGTTTGGGTTGCCACTGGCGCATCACCGACTGTCTTCCGCTATGTAGATTGGTTAATTACAGTTCCGTTACAGATGATTGAATTCTATCTAATTCTAGCAGCCTGTACAGCGATCGCAGCCGGAGTGTTCTGGCGACTGATGATCGGTACAATGGTCATGCTGGTAGGCGGTTATTTAGGTGAAGCTGGCTTCATAAACGCTACTGTCGGTTTTGTTATCGGCATGGCTGGTTGGGGTTATATCTTGTACGAAATCTTTGCCGGTGAAGCTGGCAAGGTTGCTGCAGATAGTGCGCCTGCATCAGTTCAGTCAGCCTTTAACACAATGCGTCTGATCGTTACAGTCGGTTGGGCGATTTACCCGCTGGGATATTTCTTCGGTTATCTGACCGGTGGTGTAGATGCCAATTCACTGAACTTGATTTACAACGTGGCCGATATTGTGAATAAAATTGGCTTCTGTTTGGCGATTTGGGCTGCTGCGACTTCGCAGTCAGAAACTGCCAAG MSILKSLKSVAIASLALLIPSIALAAGGNLEPNDPVGITFWLISIAMVAATVFFLMESLRVDGKWRTSLIVGGLVTLVAAVHYFYMRDVWVATGASPTVFRYVDWLITVPLQMIEFYLILAACTAIAAGVFWRLMIGTMVMLVGGYLGEAGFINATVGFVIGMAGWGYILYEIFAGEAGKVAADSAPASVQSAFNTMRLIVTVGWAIYPLGYFFGYLTGGVDANSLNLIYNVADIVNKIGFCLAIWAAATSQSETAK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTCAATACTTAAGTCGTTAAAGTCAGTCGCTATCGCGTCACTGGCATTACTTATCCCATCAATTGCATTAGCAGCTGGTGGAAACTTAGAGCCGAACGATCCTGTCGGCATTACGTTTTGGTTGATCTCGATCGCAATGGTCGCCGCTACTGTTTTCTTCTTAATGGAGTCATTGAGAGTTGATGGC---AAGTGGAGAACATCACTGATTGTTGGTGGTCTGGTCACACTTGTCGCTGCTGTACACTATTTCTACATGAGAGATGTTTGGGTT------------------------------GCCACT---------------------GGCGCATCACCGACTGTCTTCCGCTATGTAGATTGG------------------------TTAATTACAGTTCCGTTACAGATGATTGAATTCTATCTAATTCTAGCAGCC---------TGT---ACAGCGATCGCAGCC---GGAGTG------------------------------------TTCTGGCGA---CTGATGATCGGTACAATGGTCATGCTGGTAGGCGGTTATTTAGGTGAA---------GCT------------------GGC------TTC---------------------------------ATA------------------------------------------------------------------AACGCT------------------ACTGTCGGT---TTTGTTATCGGCATGGCTGGTTGGGGTTATATCTTGTACGAAATC---------------TTT------GCC---GGTGAAGCTGGCAAGGTTGCTGCAGAT------AGT---GCGCCTGCATCAGTT---CAG---TCA---GCC---TTT---AAC---ACAATG---CGTCTGATCGTTACAGTC---------------------------------------------------------------GGTTGG---------GCGATTTACCCGCTGGGATATTTCTTCGGTTATCTG---------------------------------------ACCGGTGGTGTAGATGCCAATTCACTGAACTTGATTTACAACGTGGCCGATATTGTGAATAAAATTGGCTTCTGTTTGGCGATTTGGGCTGCTGCGACTTCGCAG---TCAGAAACTGCCAAG------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------MSILKSLKSVAIASLALLIPSIALAAGGNLEPNDPVGITFWLISIAMVAATVFFLMESLRVDG-KWRTSLIVGGLVTLVAAVHYFYMRDVWV----------AT-------GASPTVFRYVDW--------LITVPLQMIEFYLILAA---C-TAIAA-GV------------FWR-LMIGTMVMLVGGYLGE---A------G--F-----------I----------------------NA------TVG-FVIGMAGWGYILYEI-----F--A-GEAGKVAAD--S-APASV-Q-S-A-F-N-TM-RLIVTV---------------------GW---AIYPLGYFFGYL-------------TGGVDANSLNLIYNVADIVNKIGFCLAIWAAATSQ-SETAK------------------------------------ [IV-Proteo3-HF10_19P19]_EU079224 [IV-Proteo3-HF10_19P19] NASB_91_env_samples_EU079224 gi|156106607|gb|EU079224| Uncultured organism clone NASB 91 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 91 putative proteorhodopsin gene, partial cds EU079224 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGTTACGTTGATTGGCTAATCACCGTTCCACTTCAGATGATTGAATTCTACCTAATCTTGGCTGCGTGCACAGCGGTTGCGATGGGTGTTTTCAGGAGACTTTTAGTTGGAACTATGATTATGTTAGTTGGCGGATATCTGGGGGAAGCAGGCTTCATCAACGCCACACTCGGTTTCGTCATCGGCATGGCTGGTTGGGCATACATTCTGTATGAAATTTTTGCAGGTGAAGCCGGAAAGGTTGCTGCAGATGAGGCACCAGATTCTGTAAAGTCTGCGTTTAGCATGATGCGCTGGATTGTGACGATCGGGTGGGCAATTTAT RYVDWLITVPLQMIEFYLILAACTAVAMGVFRRLLVGTMIMLVGGYLGEAGFINATLGFVIGMAGWAYILYEIFAGEAGKVAADEAPDSVKSAFSMMRWIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTACGTTGATTGG------------------------CTAATCACCGTTCCACTTCAGATGATTGAATTCTACCTAATCTTGGCTGCG---------TGC---ACAGCGGTTGCGATG---GGTGTT------------------------------------TTCAGGAGA---CTTTTAGTTGGAACTATGATTATGTTAGTTGGCGGATATCTGGGGGAA---------GCA------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCC------------------ACACTCGGT---TTCGTCATCGGCATGGCTGGTTGGGCATACATTCTGTATGAAATT---------------TTT------GCA---GGTGAAGCCGGAAAGGTTGCTGCAGAT------GAG---GCACCAGATTCTGTA---AAG---TCT---GCG---TTT---AGC---ATGATG---CGCTGGATTGTGACGATC---------------------------------------------------------------GGGTGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LITVPLQMIEFYLILAA---C-TAVAM-GV------------FRR-LLVGTMIMLVGGYLGE---A------G--F-----------I----------------------NA------TLG-FVIGMAGWAYILYEI-----F--A-GEAGKVAAD--E-APDSV-K-S-A-F-S-MM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ926123 [IV-Proteo3-HF10_19P19] BOUM_OTU036_env_samples gb|KJ926123| Uncultured bacterium clone BOUM OTU036 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU036 putative proteorhodopsin gene, partial cds KJ926123 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 39.0995 5.3403333 #na #na #na #na #na GTAGACTGGCTAATCACCGTTCCACTTCAGATGATTGAATTCTACCTAATCTTGGCTGCGTGCACAGCGGTTGCGATGGGTGTTTTCTGGAGACTTTTAGTTGGAACTATAATTATGTTAGTTGGCGGATATCTGGGGGAAGCAGGCTTCATCAACACCACACTCGGTTTCGTCATCGGCATGGCTGGTTGGGCATACATCTTGTATGAAATTTTTGCAGGTGAAGCCGGAAAGGTTGCTGCAGATGAGGCACCAGATTCTGTAAAGTCTGCGTTTAGCATGATGCGCTGGATTGTGACGATCGGTTGGGCAATTTAC VDWLITVPLQMIEFYLILAACTAVAMGVFWRLLVGTIIMLVGGYLGEAGFINTTLGFVIGMAGWAYILYEIFAGEAGKVAADEAPDSVKSAFSMMRWIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGACTGG------------------------CTAATCACCGTTCCACTTCAGATGATTGAATTCTACCTAATCTTGGCTGCG---------TGC---ACAGCGGTTGCGATG---GGTGTT------------------------------------TTCTGGAGA---CTTTTAGTTGGAACTATAATTATGTTAGTTGGCGGATATCTGGGGGAA---------GCA------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACACC------------------ACACTCGGT---TTCGTCATCGGCATGGCTGGTTGGGCATACATCTTGTATGAAATT---------------TTT------GCA---GGTGAAGCCGGAAAGGTTGCTGCAGAT------GAG---GCACCAGATTCTGTA---AAG---TCT---GCG---TTT---AGC---ATGATG---CGCTGGATTGTGACGATC---------------------------------------------------------------GGTTGG---------GCAATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPLQMIEFYLILAA---C-TAVAM-GV------------FWR-LLVGTIIMLVGGYLGE---A------G--F-----------I----------------------NT------TLG-FVIGMAGWAYILYEI-----F--A-GEAGKVAAD--E-APDSV-K-S-A-F-S-MM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_1105128143384 [IV-Proteo3-HF10_19P19] JCVI_ORF_1105128143384_GS001c_Open_Ocean_5m jcvi|1105128143384| 1105128143384 JCVI ORF 1105128143384 1105128143384 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 15-MAY-2003 Open_Ocean/5m_depth/S_36.7_psu/GS001c/Hydrostation_S/Sargasso_Sea Sargasso Sea marine 32.166668 -64.5 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf GGGGTGGAAGGCTATCGTTATTTTTTAATGGTGTTTTCGGGGGGAACAAACTTTATCAAAATAAAGTTTGTGTTTAAAAAGGTAGGGCGTTCTAGAACGAAGTTTTTTGGGAGTGTCCTAATGACAATGATAAAATCTGCTGCGTTAGCAGCTTTAACAATTCTAATTCCGTCAATCGCATTTGCGGCTGGGGGAAACCTAGAGCCTAACGACCCTGTTGGTATTACTTTTTGGCTTATCTCAATAGCCATGGTTGCTGCTACAGTGTTTTTCCTTATGGAATCTTTGAGAGTTTCAGGTAAATGGAGAACATCGCTTATTGTTGGTGGTCTGGTAACGTTAGTTGCTGCAGTGCACTACTTTTACATGAGAGATGTTTGGGTTAGCACAGGTCAGTCACCTACAGTATTTAGATACGTCGACTGGTTAATTACAGTGCCACTTCAAATGATCGAATTTTACCTAATTCTAGCCGCATGTACTGCCGTTGCAATGGGAGTATTCTGGCGACTTCTAGTGGGTACAGTAATAATGTTACTCGGCGGTTACCTAGGAGAGGCTGGCTTTATAAATGCCACAGTTGGTTTCGTAATTGGAATGGCAGGATGGGCATACATTTTGTATGAAATTTTTGCAGGTGAAGCTGGCAAAGTTGCTGCAGACGAGGCTCCTGAGTCCGTGAAGTCTGCATTTAGCTTAATGCGTTGGATTGTGACAATTGGATGGGCCATTTATCCACTTGGATATTTCTTCGGTTACTTAGCCGGAGGTGTCGACGACAATTCACTGAATCTTATCTACAACGTAGCTGACGTTGTTAACAAGATTGGTTTCTGTTTAGCAATTTGGGCAGCTGCCACAAGTGAATCAGAAGCAAAAGCT GVEGYRYFLMVFSGGTNFIKIKFVFKKVGRSRTKFFGSVLMTMIKSAALAALTILIPSIAFAAGGNLEPNDPVGITFWLISIAMVAATVFFLMESLRVSGKWRTSLIVGGLVTLVAAVHYFYMRDVWVSTGQSPTVFRYVDWLITVPLQMIEFYLILAACTAVAMGVFWRLLVGTVIMLLGGYLGEAGFINATVGFVIGMAGWAYILYEIFAGEAGKVAADEAPESVKSAFSLMRWIVTIGWAIYPLGYFFGYLAGGVDDNSLNLIYNVADVVNKIGFCLAIWAAATSESEAKA ---------------------------------------------------------------------------------------------------------------------------------------------------------------GGGGTGGAAGGCTATCGTTATTTTTTAATGGTGTTTTCGGGGGGAACAAACTTTATCAAAATAAAGTTTGTGTTTAAAAAGGTAGGGCGTTCTAGAACGAAGTTTTTTGGGAGTGTCCTAATGACAATGATAAAATCTGCTGCGTTAGCAGCTTTAACAATTCTAATTCCGTCAATCGCATTTGCGGCTGGGGGAAACCTAGAGCCTAACGACCCTGTTGGTATTACTTTTTGGCTTATCTCAATAGCCATGGTTGCTGCTACAGTGTTTTTCCTTATGGAATCTTTGAGAGTTTCAGGT---AAATGGAGAACATCGCTTATTGTTGGTGGTCTGGTAACGTTAGTTGCTGCAGTGCACTACTTTTACATGAGAGATGTTTGGGTT------------------------------AGCACA---------------------GGTCAGTCACCTACAGTATTTAGATACGTCGACTGG------------------------TTAATTACAGTGCCACTTCAAATGATCGAATTTTACCTAATTCTAGCCGCA---------TGT---ACTGCCGTTGCAATG---GGAGTA------------------------------------TTCTGGCGA---CTTCTAGTGGGTACAGTAATAATGTTACTCGGCGGTTACCTAGGAGAG---------GCT------------------GGC------TTT---------------------------------ATA------------------------------------------------------------------AATGCC------------------ACAGTTGGT---TTCGTAATTGGAATGGCAGGATGGGCATACATTTTGTATGAAATT---------------TTT------GCA---GGTGAAGCTGGCAAAGTTGCTGCAGAC------GAG---GCTCCTGAGTCCGTG---AAG---TCT---GCA---TTT---AGC---TTAATG---CGTTGGATTGTGACAATT---------------------------------------------------------------GGATGG---------GCCATTTATCCACTTGGATATTTCTTCGGTTACTTA---------------------------------------GCCGGAGGTGTCGACGACAATTCACTGAATCTTATCTACAACGTAGCTGACGTTGTTAACAAGATTGGTTTCTGTTTAGCAATTTGGGCAGCTGCCACAAGTGAA---TCAGAAGCAAAAGCT------------------------------------------------------------------------------------------------------------ -----------------------------------------------------GVEGYRYFLMVFSGGTNFIKIKFVFKKVGRSRTKFFGSVLMTMIKSAALAALTILIPSIAFAAGGNLEPNDPVGITFWLISIAMVAATVFFLMESLRVSG-KWRTSLIVGGLVTLVAAVHYFYMRDVWV----------ST-------GQSPTVFRYVDW--------LITVPLQMIEFYLILAA---C-TAVAM-GV------------FWR-LLVGTVIMLLGGYLGE---A------G--F-----------I----------------------NA------TVG-FVIGMAGWAYILYEI-----F--A-GEAGKVAAD--E-APESV-K-S-A-F-S-LM-RWIVTI---------------------GW---AIYPLGYFFGYL-------------AGGVDDNSLNLIYNVADVVNKIGFCLAIWAAATSE-SEAKA------------------------------------ [IV-Proteo3-ARCTIC20C09]_DQ203694 [IV-Proteo3-ARCTIC20C09] medHO155D12_env_samples_DQ203694 gi|77547836|gb|DQ203694| Uncultured bacterium clone medHO155D12 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155D12 predicted proteorhodopsin gene, partial cds DQ203694 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/ARCTIC20C09 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 ARCTIC20C09 Alphaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTGATTACTGTTCCACTTCAAATGATCGAGTTTTATTTGATACTCGCTGCAGTAGGGGCAGCCACCAGCCGAATTTTCTGGCATTTGCTAGTTGGTACGCTTGTTATGTTACTAGGTGGCTATTTCGGCGAGATTGGAGTAATCGATGCGACCCTCGGCTTTATCATTGGTATGGCTGGCTGGGTATATATCCTTTACTTTATTTTTGCCGGCGAAGCTGGTCAAAGCGTCAAGAGCACATCGCCTGCTGTGCAAAGCGCCTTTAGCGCTATGCGTCTCATTGTATTGGTAGGCTGGGCCATCTACCCA RYIDWLITVPLQMIEFYLILAAVGAATSRIFWHLLVGTLVMLLGGYFGEIGVIDATLGFIIGMAGWVYILYFIFAGEAGQSVKSTSPAVQSAFSAMRLIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTGATTACTGTTCCACTTCAAATGATCGAGTTTTATTTGATACTCGCTGCA---------GTA---GGGGCAGCCACCAGC---CGAATT------------------------------------TTCTGGCAT---TTGCTAGTTGGTACGCTTGTTATGTTACTAGGTGGCTATTTCGGCGAG---------ATT------------------GGA------GTA---------------------------------ATC------------------------------------------------------------------GATGCG------------------ACCCTCGGC---TTTATCATTGGTATGGCTGGCTGGGTATATATCCTTTACTTTATT---------------TTT------GCC---GGCGAAGCTGGTCAA---AGCGTCAAG------AGC---ACATCGCCTGCTGTG---CAA---AGC---GCC---TTT---AGC---GCTATG---CGTCTCATTGTATTGGTA---------------------------------------------------------------GGCTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---V-GAATS-RI------------FWH-LLVGTLVMLLGGYFGE---I------G--V-----------I----------------------DA------TLG-FIIGMAGWVYILYFI-----F--A-GEAGQ-SVK--S-TSPAV-Q-S-A-F-S-AM-RLIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-ARCTIC20C09]_DQ203729 [IV-Proteo3-ARCTIC20C09] medHO155H11_env_samples_DQ203729 gi|77547906|gb|DQ203729| Uncultured bacterium clone medHO155H11 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155H11 predicted proteorhodopsin gene, partial cds DQ203729 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/ARCTIC20C09 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 ARCTIC20C09 Alphaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTGATTACTGTTCCACTTCAAATGATCGAGTTTTATTTGATACTCGCTGCAGTAGGGGCAGCCACCAGCCGAATTTTCTGGCATTTGCTAGTTGGTACGCTTGTTATGTTACTAGGTGGCTATTTCGGCGAGATTGGAGTAATCGATGCGACCCTCGGCTTTATCATTGGTATGGCTGGCTGGGTATATATCCTTTACTTTATTTTTGCCGGCGAAGCTGGTCAAAGCGTCAAGAGCACATCGCCTGCTGTGCAAAGCGCCTTTAGCGCTATGCGTCTCATTGTATTGGTAGGGTGGGCAATCTACCCA RYIDWLITVPLQMIEFYLILAAVGAATSRIFWHLLVGTLVMLLGGYFGEIGVIDATLGFIIGMAGWVYILYFIFAGEAGQSVKSTSPAVQSAFSAMRLIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTGATTACTGTTCCACTTCAAATGATCGAGTTTTATTTGATACTCGCTGCA---------GTA---GGGGCAGCCACCAGC---CGAATT------------------------------------TTCTGGCAT---TTGCTAGTTGGTACGCTTGTTATGTTACTAGGTGGCTATTTCGGCGAG---------ATT------------------GGA------GTA---------------------------------ATC------------------------------------------------------------------GATGCG------------------ACCCTCGGC---TTTATCATTGGTATGGCTGGCTGGGTATATATCCTTTACTTTATT---------------TTT------GCC---GGCGAAGCTGGTCAA---AGCGTCAAG------AGC---ACATCGCCTGCTGTG---CAA---AGC---GCC---TTT---AGC---GCTATG---CGTCTCATTGTATTGGTA---------------------------------------------------------------GGGTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---V-GAATS-RI------------FWH-LLVGTLVMLLGGYFGE---I------G--V-----------I----------------------DA------TLG-FIIGMAGWVYILYFI-----F--A-GEAGQ-SVK--S-TSPAV-Q-S-A-F-S-AM-RLIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-ARCTIC20C09]_DQ203667 [IV-Proteo3-ARCTIC20C09] medHO155A5_env_samples_DQ203667 gi|77547782|gb|DQ203667| Uncultured bacterium clone medHO155A5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155A5 predicted proteorhodopsin gene, partial cds DQ203667 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/ARCTIC20C09 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 ARCTIC20C09 Alphaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTGATTACTGTTCCACTTCAAATGATCGAGTTTTATTTGATACTAGCTGCAGTAGGGGCAGCCACCAGCCGAATTTTCTGGCATTTGCTAGTTGGTACGCTTGTTATGTTATTGGGTGGCTATTTCGGCGAGATTGGAGTAATCGATGCGACCCTCGGCTTTATCATTGGTATGGCTGGCTGGGTATATATCCTTTACTTTATTTTTGCCGGCGAAGCTGGTCAAAGCGTCAAGAGCACATCGCCTGCTGTGCAAAGCGCCTTTAGCGCTATGCGTCTCATTGTATTGGTAGGGTGGGCAATCTATCCA RYIDWLITVPLQMIEFYLILAAVGAATSRIFWHLLVGTLVMLLGGYFGEIGVIDATLGFIIGMAGWVYILYFIFAGEAGQSVKSTSPAVQSAFSAMRLIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTGATTACTGTTCCACTTCAAATGATCGAGTTTTATTTGATACTAGCTGCA---------GTA---GGGGCAGCCACCAGC---CGAATT------------------------------------TTCTGGCAT---TTGCTAGTTGGTACGCTTGTTATGTTATTGGGTGGCTATTTCGGCGAG---------ATT------------------GGA------GTA---------------------------------ATC------------------------------------------------------------------GATGCG------------------ACCCTCGGC---TTTATCATTGGTATGGCTGGCTGGGTATATATCCTTTACTTTATT---------------TTT------GCC---GGCGAAGCTGGTCAA---AGCGTCAAG------AGC---ACATCGCCTGCTGTG---CAA---AGC---GCC---TTT---AGC---GCTATG---CGTCTCATTGTATTGGTA---------------------------------------------------------------GGGTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---V-GAATS-RI------------FWH-LLVGTLVMLLGGYFGE---I------G--V-----------I----------------------DA------TLG-FIIGMAGWVYILYFI-----F--A-GEAGQ-SVK--S-TSPAV-Q-S-A-F-S-AM-RLIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-ARCTIC20C09]_DQ203580 [IV-Proteo3-ARCTIC20C09] MedHO1202H8_env_samples_DQ203580 gi|77547608|gb|DQ203580| Uncultured bacterium clone MedHO1202H8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202H8 predicted proteorhodopsin gene, partial cds DQ203580 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/ARCTIC20C09 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 ARCTIC20C09 Alphaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATAGACTGGCTGATTACTGTTCCACTTCAAATGATCGAGTTTTATTTGATACTCGCTGCAGTAGGGGCAGCCACCAGCCGAATTTTCTGGCATTTGCTAGTTGGTACGCTTGTTATGTTACTAGGTGGCTATTTCGGCGAGATTGGAGTAATCGATGCGACCCTCGGCTTTATCATTGGTATGGCTGGCTGGGTATATATCCTTTACTTTATTTTTGCCGGCGAAGCTGGTCAAAGCGTCAAGAGCACATCGCCTGCTGTGCAAAGCGCCTTTAGCGCTATGCGTCTCATTGTATTGGTAGGGTGGGCTATCTATCCA RYIDWLITVPLQMIEFYLILAAVGAATSRIFWHLLVGTLVMLLGGYFGEIGVIDATLGFIIGMAGWVYILYFIFAGEAGQSVKSTSPAVQSAFSAMRLIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATTACTGTTCCACTTCAAATGATCGAGTTTTATTTGATACTCGCTGCA---------GTA---GGGGCAGCCACCAGC---CGAATT------------------------------------TTCTGGCAT---TTGCTAGTTGGTACGCTTGTTATGTTACTAGGTGGCTATTTCGGCGAG---------ATT------------------GGA------GTA---------------------------------ATC------------------------------------------------------------------GATGCG------------------ACCCTCGGC---TTTATCATTGGTATGGCTGGCTGGGTATATATCCTTTACTTTATT---------------TTT------GCC---GGCGAAGCTGGTCAA---AGCGTCAAG------AGC---ACATCGCCTGCTGTG---CAA---AGC---GCC---TTT---AGC---GCTATG---CGTCTCATTGTATTGGTA---------------------------------------------------------------GGGTGG---------GCTATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---V-GAATS-RI------------FWH-LLVGTLVMLLGGYFGE---I------G--V-----------I----------------------DA------TLG-FIIGMAGWVYILYFI-----F--A-GEAGQ-SVK--S-TSPAV-Q-S-A-F-S-AM-RLIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-ARCTIC20C09]_DQ203381 [IV-Proteo3-ARCTIC20C09] MedHO102D5_env_samples_DQ203381 gi|77547210|gb|DQ203381| Uncultured bacterium clone MedHO102D5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102D5 predicted proteorhodopsin gene, partial cds DQ203381 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/ARCTIC20C09 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 ARCTIC20C09 Alphaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTGATTACTGTTCCACTTCAAATGATCGAGTTTTATTTGATACTCGCTGCAGTAGGGGCAGCCACCAGCCGAATTTTCTGGCATTTGCTAGTTGGTACGCTTGTTATGTTACTAGGTGGCTATTTCGGCGAGATTGGAGTAATCGATGCGACCCTCGGCTTTATCATTGGTATGGCTGGCTGGGTATATATCCTTTACTTTATTTTTGCCGGCGAAGCTGGTCAAAGCGTCAAGAGCACATCGCCTGCTGTGCAAAGCGCCTTTAGCGCTATGCGTCTCATTGTATTGGTAGGGTGGGCAATATATCCA RYIDWLITVPLQMIEFYLILAAVGAATSRIFWHLLVGTLVMLLGGYFGEIGVIDATLGFIIGMAGWVYILYFIFAGEAGQSVKSTSPAVQSAFSAMRLIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTGATTACTGTTCCACTTCAAATGATCGAGTTTTATTTGATACTCGCTGCA---------GTA---GGGGCAGCCACCAGC---CGAATT------------------------------------TTCTGGCAT---TTGCTAGTTGGTACGCTTGTTATGTTACTAGGTGGCTATTTCGGCGAG---------ATT------------------GGA------GTA---------------------------------ATC------------------------------------------------------------------GATGCG------------------ACCCTCGGC---TTTATCATTGGTATGGCTGGCTGGGTATATATCCTTTACTTTATT---------------TTT------GCC---GGCGAAGCTGGTCAA---AGCGTCAAG------AGC---ACATCGCCTGCTGTG---CAA---AGC---GCC---TTT---AGC---GCTATG---CGTCTCATTGTATTGGTA---------------------------------------------------------------GGGTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---V-GAATS-RI------------FWH-LLVGTLVMLLGGYFGE---I------G--V-----------I----------------------DA------TLG-FIIGMAGWVYILYFI-----F--A-GEAGQ-SVK--S-TSPAV-Q-S-A-F-S-AM-RLIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-ARCTIC20C09]_DQ203639 [IV-Proteo3-ARCTIC20C09] medHO120F8_env_samples_DQ203639 gi|77547726|gb|DQ203639| Uncultured bacterium clone medHO120F8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120F8 predicted proteorhodopsin gene, partial cds DQ203639 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/ARCTIC20C09 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 ARCTIC20C09 Alphaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGACTGGCTGATTACTGTTCCACTTCAAATGATCGAGTTTTATTTGATACTCGCTGCAGTAGGGGCAGCCACCAGCCGAATTTTCTGGCATTTGCTAGTTGGTACGCTTGTTATGTTACTAGGTGGCTATTTCGGCGAGATTGGAGTAATCGATGCGACCCTCGGCTTTATCATTGGTATGGCTGGCTGGGTATATATCCTTTACTTTATTTTTGCCGGCGAAGCTGGTCAAAGCGTCAAGAGCACATCGCCTGCTGTGCAAAGCGCCTTTAGCGCTATGCGTCTCATTGTATTGGTAGGGTGGGCCATATATCCA RYIDWLITVPLQMIEFYLILAAVGAATSRIFWHLLVGTLVMLLGGYFGEIGVIDATLGFIIGMAGWVYILYFIFAGEAGQSVKSTSPAVQSAFSAMRLIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGACTGG------------------------CTGATTACTGTTCCACTTCAAATGATCGAGTTTTATTTGATACTCGCTGCA---------GTA---GGGGCAGCCACCAGC---CGAATT------------------------------------TTCTGGCAT---TTGCTAGTTGGTACGCTTGTTATGTTACTAGGTGGCTATTTCGGCGAG---------ATT------------------GGA------GTA---------------------------------ATC------------------------------------------------------------------GATGCG------------------ACCCTCGGC---TTTATCATTGGTATGGCTGGCTGGGTATATATCCTTTACTTTATT---------------TTT------GCC---GGCGAAGCTGGTCAA---AGCGTCAAG------AGC---ACATCGCCTGCTGTG---CAA---AGC---GCC---TTT---AGC---GCTATG---CGTCTCATTGTATTGGTA---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---V-GAATS-RI------------FWH-LLVGTLVMLLGGYFGE---I------G--V-----------I----------------------DA------TLG-FIIGMAGWVYILYFI-----F--A-GEAGQ-SVK--S-TSPAV-Q-S-A-F-S-AM-RLIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-ARCTIC20C09]_DQ203523 [IV-Proteo3-ARCTIC20C09] MedHO1202C7_env_samples_DQ203523 gi|77547494|gb|DQ203523| Uncultured bacterium clone MedHO1202C7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202C7 predicted proteorhodopsin gene, partial cds DQ203523 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/ARCTIC20C09 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 ARCTIC20C09 Alphaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATAGACTGGCTGATTACTGTTCCACTTCAAATGATCGAGTTTTATTTGATACTCGCTGCAGTAGGGGCAGCCACCAGCCGAATTTTCTGGCATTTGCTAGTTGGTACGCTTGTTATGTTACTAGGTGGCTATTTCGGCGAGATTGGAGTAATCGATGCGACCCTCGGCTTTATCATTGGTATGGCTGGCTGGGTATATATCCTTTACTTTATTTTTGCCGGCGAAGCTGGTCAAAGCGTCAAGAGCACATCGCCTGCTGTGCAAAGCGCCTTTAGCGCTATGCGTCTCATTGTATTGGTAGGGTGGGCAATATATCCA RYIDWLITVPLQMIEFYLILAAVGAATSRIFWHLLVGTLVMLLGGYFGEIGVIDATLGFIIGMAGWVYILYFIFAGEAGQSVKSTSPAVQSAFSAMRLIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATTACTGTTCCACTTCAAATGATCGAGTTTTATTTGATACTCGCTGCA---------GTA---GGGGCAGCCACCAGC---CGAATT------------------------------------TTCTGGCAT---TTGCTAGTTGGTACGCTTGTTATGTTACTAGGTGGCTATTTCGGCGAG---------ATT------------------GGA------GTA---------------------------------ATC------------------------------------------------------------------GATGCG------------------ACCCTCGGC---TTTATCATTGGTATGGCTGGCTGGGTATATATCCTTTACTTTATT---------------TTT------GCC---GGCGAAGCTGGTCAA---AGCGTCAAG------AGC---ACATCGCCTGCTGTG---CAA---AGC---GCC---TTT---AGC---GCTATG---CGTCTCATTGTATTGGTA---------------------------------------------------------------GGGTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---V-GAATS-RI------------FWH-LLVGTLVMLLGGYFGE---I------G--V-----------I----------------------DA------TLG-FIIGMAGWVYILYFI-----F--A-GEAGQ-SVK--S-TSPAV-Q-S-A-F-S-AM-RLIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-ARCTIC20C09]_DQ203628 [IV-Proteo3-ARCTIC20C09] medHO120E6_env_samples_DQ203628 gi|77547704|gb|DQ203628| Uncultured bacterium clone medHO120E6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120E6 predicted proteorhodopsin gene, partial cds DQ203628 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/ARCTIC20C09 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 ARCTIC20C09 Alphaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTGATTACTGTTCCACTTCAAATGATCGAGTTTTATTTGATACTCGCTGCAGTAGGGGCAGCCACCAGCCGAATTTTCTGGCATTTGCTAGTTGGTACGCTTGTTATGTTACTAGGTGGCTATTTCGGCGAGATTGGAGTAATCGATGCGACCCTCGGCTTTATCATTGGTATGGCTGGCTGGGTATATATCCTTTACTTTATTTTTGCCGGCGAAGCTGGTCAAAGCGTCAAGAGCACATCGCCTGCTGTGCAAAGCGCCTTTAGCGCTATGCGTCTCATTGTATTGGTAGGGTGGGCAATATATCCA RYIDWLITVPLQMIEFYLILAAVGAATSRIFWHLLVGTLVMLLGGYFGEIGVIDATLGFIIGMAGWVYILYFIFAGEAGQSVKSTSPAVQSAFSAMRLIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTGATTACTGTTCCACTTCAAATGATCGAGTTTTATTTGATACTCGCTGCA---------GTA---GGGGCAGCCACCAGC---CGAATT------------------------------------TTCTGGCAT---TTGCTAGTTGGTACGCTTGTTATGTTACTAGGTGGCTATTTCGGCGAG---------ATT------------------GGA------GTA---------------------------------ATC------------------------------------------------------------------GATGCG------------------ACCCTCGGC---TTTATCATTGGTATGGCTGGCTGGGTATATATCCTTTACTTTATT---------------TTT------GCC---GGCGAAGCTGGTCAA---AGCGTCAAG------AGC---ACATCGCCTGCTGTG---CAA---AGC---GCC---TTT---AGC---GCTATG---CGTCTCATTGTATTGGTA---------------------------------------------------------------GGGTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---V-GAATS-RI------------FWH-LLVGTLVMLLGGYFGE---I------G--V-----------I----------------------DA------TLG-FIIGMAGWVYILYFI-----F--A-GEAGQ-SVK--S-TSPAV-Q-S-A-F-S-AM-RLIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-ARCTIC20C09]_DQ203634 [IV-Proteo3-ARCTIC20C09] medHO120F3_env_samples_DQ203634 gi|77547716|gb|DQ203634| Uncultured bacterium clone medHO120F3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120F3 predicted proteorhodopsin gene, partial cds DQ203634 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/ARCTIC20C09 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 ARCTIC20C09 Alphaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGACTGGCTGATTACTGTTCCACTTCAAATGATCGAGTTTTATTTGATACTCGCTGCAGTAGGGGCAGCCACCAGCCGAATTTTCTGGCATTTGCTAGTTGGTACGCTTGTTATGTTACTAGGTGGCTATTTCGGCGAGATTGGAGTAATCGATGCGACCCTCGGCTTTATCATTGGTATGGCTGGCTGGGTATATATCCTTTACTTTATTTTTGCCGGCGAAGCTGGTCAAAGCGTCAAGAGCACATCGCCTGCTGTGCAAAGCGCCTTTAGCGCTATGCGTCTCATTGTATTGGTAGGGTGGGCAATTTATCCA SYIDWLITVPLQMIEFYLILAAVGAATSRIFWHLLVGTLVMLLGGYFGEIGVIDATLGFIIGMAGWVYILYFIFAGEAGQSVKSTSPAVQSAFSAMRLIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGACTGG------------------------CTGATTACTGTTCCACTTCAAATGATCGAGTTTTATTTGATACTCGCTGCA---------GTA---GGGGCAGCCACCAGC---CGAATT------------------------------------TTCTGGCAT---TTGCTAGTTGGTACGCTTGTTATGTTACTAGGTGGCTATTTCGGCGAG---------ATT------------------GGA------GTA---------------------------------ATC------------------------------------------------------------------GATGCG------------------ACCCTCGGC---TTTATCATTGGTATGGCTGGCTGGGTATATATCCTTTACTTTATT---------------TTT------GCC---GGCGAAGCTGGTCAA---AGCGTCAAG------AGC---ACATCGCCTGCTGTG---CAA---AGC---GCC---TTT---AGC---GCTATG---CGTCTCATTGTATTGGTA---------------------------------------------------------------GGGTGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQMIEFYLILAA---V-GAATS-RI------------FWH-LLVGTLVMLLGGYFGE---I------G--V-----------I----------------------DA------TLG-FIIGMAGWVYILYFI-----F--A-GEAGQ-SVK--S-TSPAV-Q-S-A-F-S-AM-RLIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-ARCTIC20C09]_DQ203544 [IV-Proteo3-ARCTIC20C09] MedHO1202E5_env_samples_DQ203544 gi|77547536|gb|DQ203544| Uncultured bacterium clone MedHO1202E5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202E5 predicted proteorhodopsin gene, partial cds DQ203544 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/ARCTIC20C09 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 ARCTIC20C09 Alphaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATAGACTGGCTGATTACTGTTCCACTTCAAATGATCGAGTTTTATTTGATACTCGCTGCAGTAGGGGCAGCCACCAGCCGAATTTTCTGGCATTTGCTAGTTGGTACGCTTGTTATGTTACTAGGTGGCTATTTCGGCGAGATTGGAGTAATCGATGCGACCCTCGGCTTTATCATTGGTATGGCTGGCTGGGTATATATCCTTTACTTTATTTTTGCCGGCGAAGCTGGTCAAAGCGTCAAGAGCACATCGCCTGCTGTGCAAAGCGCCTTTAGCGCTATGCGTCTCATTGTATTGGTAGGGTGGGCAATTTATCCA RYIDWLITVPLQMIEFYLILAAVGAATSRIFWHLLVGTLVMLLGGYFGEIGVIDATLGFIIGMAGWVYILYFIFAGEAGQSVKSTSPAVQSAFSAMRLIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATTACTGTTCCACTTCAAATGATCGAGTTTTATTTGATACTCGCTGCA---------GTA---GGGGCAGCCACCAGC---CGAATT------------------------------------TTCTGGCAT---TTGCTAGTTGGTACGCTTGTTATGTTACTAGGTGGCTATTTCGGCGAG---------ATT------------------GGA------GTA---------------------------------ATC------------------------------------------------------------------GATGCG------------------ACCCTCGGC---TTTATCATTGGTATGGCTGGCTGGGTATATATCCTTTACTTTATT---------------TTT------GCC---GGCGAAGCTGGTCAA---AGCGTCAAG------AGC---ACATCGCCTGCTGTG---CAA---AGC---GCC---TTT---AGC---GCTATG---CGTCTCATTGTATTGGTA---------------------------------------------------------------GGGTGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---V-GAATS-RI------------FWH-LLVGTLVMLLGGYFGE---I------G--V-----------I----------------------DA------TLG-FIIGMAGWVYILYFI-----F--A-GEAGQ-SVK--S-TSPAV-Q-S-A-F-S-AM-RLIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-ARCTIC20C09]_DQ203577 [IV-Proteo3-ARCTIC20C09] MedHO1202H5_env_samples_DQ203577 gi|77547602|gb|DQ203577| Uncultured bacterium clone MedHO1202H5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202H5 predicted proteorhodopsin gene, partial cds DQ203577 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/ARCTIC20C09 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 ARCTIC20C09 Alphaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATAGATTGGCTGATTACTGTTCCACTTCAAATGATCGAGTTTTATTTGATACTCGCTGCAGTAGGGGCAGCCACCAGCCGAATTTTCTGGCATTTGCTAGTTGGTACGCTTGTTATGTTACTAGGTGGCTATTTCGGCGAGATTGGAGTAATCGATGCGACCCTCGGCTTTATCATTGGTATGGCTGGCTGGGTATATATCCTTTACTTTATTTTTGCCGGCGAAGCTGGTCAAAGCGTCAAGAGCACATCGCCTGCTGTGCAAAGCGCCTTTAGCGCTATGCGTCTCATTGTATTGGTAGGGTGGGCAATCTATCCA SYIDWLITVPLQMIEFYLILAAVGAATSRIFWHLLVGTLVMLLGGYFGEIGVIDATLGFIIGMAGWVYILYFIFAGEAGQSVKSTSPAVQSAFSAMRLIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATAGATTGG------------------------CTGATTACTGTTCCACTTCAAATGATCGAGTTTTATTTGATACTCGCTGCA---------GTA---GGGGCAGCCACCAGC---CGAATT------------------------------------TTCTGGCAT---TTGCTAGTTGGTACGCTTGTTATGTTACTAGGTGGCTATTTCGGCGAG---------ATT------------------GGA------GTA---------------------------------ATC------------------------------------------------------------------GATGCG------------------ACCCTCGGC---TTTATCATTGGTATGGCTGGCTGGGTATATATCCTTTACTTTATT---------------TTT------GCC---GGCGAAGCTGGTCAA---AGCGTCAAG------AGC---ACATCGCCTGCTGTG---CAA---AGC---GCC---TTT---AGC---GCTATG---CGTCTCATTGTATTGGTA---------------------------------------------------------------GGGTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQMIEFYLILAA---V-GAATS-RI------------FWH-LLVGTLVMLLGGYFGE---I------G--V-----------I----------------------DA------TLG-FIIGMAGWVYILYFI-----F--A-GEAGQ-SVK--S-TSPAV-Q-S-A-F-S-AM-RLIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-ARCTIC20C09]_DQ203522 [IV-Proteo3-ARCTIC20C09] MedHO1202C6_env_samples_DQ203522 gi|77547492|gb|DQ203522| Uncultured bacterium clone MedHO1202C6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202C6 predicted proteorhodopsin gene, partial cds DQ203522 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/ARCTIC20C09 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 ARCTIC20C09 Alphaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGACTGGCTGATTACTGTTCCACTTCAAATGATCGAGTTTTATTTGATACTAGCTGCAGTAGGGGCAGCCACCAGCCGAATTTTCTGGCATTTGCTAGTTGGTACGCTTGTTATGTTACTGGGTGGCTATTTCGGCGAGATTGGAGTAATCGATGCGACCCTCGGCTTTATCATTGGTATGGCTGGCTGGGTATATATCCTTTACTTTATTTTTGCTGGCGAAGCTGGTCAAAGCGTCAAGAGCACATCGCCTGCTGTGCAAAGCGCCTTTAGCGCTATGCGTCTCATTGTATTGGTAGGGTGGGCCATATACCCA SYIDWLITVPLQMIEFYLILAAVGAATSRIFWHLLVGTLVMLLGGYFGEIGVIDATLGFIIGMAGWVYILYFIFAGEAGQSVKSTSPAVQSAFSAMRLIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGACTGG------------------------CTGATTACTGTTCCACTTCAAATGATCGAGTTTTATTTGATACTAGCTGCA---------GTA---GGGGCAGCCACCAGC---CGAATT------------------------------------TTCTGGCAT---TTGCTAGTTGGTACGCTTGTTATGTTACTGGGTGGCTATTTCGGCGAG---------ATT------------------GGA------GTA---------------------------------ATC------------------------------------------------------------------GATGCG------------------ACCCTCGGC---TTTATCATTGGTATGGCTGGCTGGGTATATATCCTTTACTTTATT---------------TTT------GCT---GGCGAAGCTGGTCAA---AGCGTCAAG------AGC---ACATCGCCTGCTGTG---CAA---AGC---GCC---TTT---AGC---GCTATG---CGTCTCATTGTATTGGTA---------------------------------------------------------------GGGTGG---------GCCATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQMIEFYLILAA---V-GAATS-RI------------FWH-LLVGTLVMLLGGYFGE---I------G--V-----------I----------------------DA------TLG-FIIGMAGWVYILYFI-----F--A-GEAGQ-SVK--S-TSPAV-Q-S-A-F-S-AM-RLIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-ARCTIC20C09]_DQ339370 [IV-Proteo3-ARCTIC20C09] clone_S-S4OM-D2_DQ339370 gi|85681711|gb|DQ339370| Uncultured bacterium clone S-S4OM-D2 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-D2 predicted proteorhodopsin gene, partial cds. DQ339370 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/ARCTIC20C09 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 ARCTIC20C09 Alphaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATTACTGTTCCACTTCAAATGATCGAATTTTATTTGATACTCGCTGCAGTAGGGGCAGCCACAAGCCGAATTTTTTGGCATTTGCTGGTTGGCACGCTGGTTATGTTACTGGGTGGCTATTTCGGCGAGATTGGAGTAATCGATGCAACCCTCGGCTTTATCATTGGTATGGCTGGTTGGGTATATATCCTTTACTTTATTTTTGCCGGCGAAGCTGGTCAAAACGTCAAGAGCACGTCGCCTGCTGTGCAAAGTGCCTTTAGCGCTATGCGTCTCATTGTATTGGTAGGGTGGGCAATTTATCCA RYIDWLITVPLQMIEFYLILAAVGAATSRIFWHLLVGTLVMLLGGYFGEIGVIDATLGFIIGMAGWVYILYFIFAGEAGQNVKSTSPAVQSAFSAMRLIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATTACTGTTCCACTTCAAATGATCGAATTTTATTTGATACTCGCTGCA---------GTA---GGGGCAGCCACAAGC---CGAATT------------------------------------TTTTGGCAT---TTGCTGGTTGGCACGCTGGTTATGTTACTGGGTGGCTATTTCGGCGAG---------ATT------------------GGA------GTA---------------------------------ATC------------------------------------------------------------------GATGCA------------------ACCCTCGGC---TTTATCATTGGTATGGCTGGTTGGGTATATATCCTTTACTTTATT---------------TTT------GCC---GGCGAAGCTGGTCAA---AACGTCAAG------AGC---ACGTCGCCTGCTGTG---CAA---AGT---GCC---TTT---AGC---GCTATG---CGTCTCATTGTATTGGTA---------------------------------------------------------------GGGTGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---V-GAATS-RI------------FWH-LLVGTLVMLLGGYFGE---I------G--V-----------I----------------------DA------TLG-FIIGMAGWVYILYFI-----F--A-GEAGQ-NVK--S-TSPAV-Q-S-A-F-S-AM-RLIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-ARCTIC20C09]_DQ339355 [IV-Proteo3-ARCTIC20C09] clone_S-S4OM-C10_DQ339355 gi|85681681|gb|DQ339355| Uncultured bacterium clone S-S4OM-C10 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-C10 predicted proteorhodopsin gene, partial cds. DQ339355 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/ARCTIC20C09 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 ARCTIC20C09 Alphaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATTACTGTTCCACTTCAAATGATCGAATTCTATTTGATACTCGCTGCAGTAGGGGCAGCCACCAGCCGAATTTTCTGGCATTTGCTAGTTGGCACACTGGTTATGTTACTGGGTGGCTATTTCGGCGAGATTGGAGTAATCGATGCAACCCTCGGCTTCATCATTGGTATGGCCGGTTGGGTATATATCCTTTACTTTATTTTTGCCGGCGAAGCTGGTCAAAACGTCAAGAGTACATCGCCTGCTGTGCAAAGCGCCTTCAGCGCCATGCGTCTCATTGTATTGGTAGGGTGGGCCATTTATCCA RYIDWLITVPLQMIEFYLILAAVGAATSRIFWHLLVGTLVMLLGGYFGEIGVIDATLGFIIGMAGWVYILYFIFAGEAGQNVKSTSPAVQSAFSAMRLIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATTACTGTTCCACTTCAAATGATCGAATTCTATTTGATACTCGCTGCA---------GTA---GGGGCAGCCACCAGC---CGAATT------------------------------------TTCTGGCAT---TTGCTAGTTGGCACACTGGTTATGTTACTGGGTGGCTATTTCGGCGAG---------ATT------------------GGA------GTA---------------------------------ATC------------------------------------------------------------------GATGCA------------------ACCCTCGGC---TTCATCATTGGTATGGCCGGTTGGGTATATATCCTTTACTTTATT---------------TTT------GCC---GGCGAAGCTGGTCAA---AACGTCAAG------AGT---ACATCGCCTGCTGTG---CAA---AGC---GCC---TTC---AGC---GCCATG---CGTCTCATTGTATTGGTA---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFYLILAA---V-GAATS-RI------------FWH-LLVGTLVMLLGGYFGE---I------G--V-----------I----------------------DA------TLG-FIIGMAGWVYILYFI-----F--A-GEAGQ-NVK--S-TSPAV-Q-S-A-F-S-AM-RLIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-ARCTIC20C09]_1105118368984 [IV-Proteo3-ARCTIC20C09] JCVI_ORF_1105118368984_GS030_Warm_Seep_19m jcvi|1105118368984| 1105118368984 JCVI ORF 1105118368984 1105118368984 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/ARCTIC20C09 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 ARCTIC20C09 Alphaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 09-FEB-2004 Warm_Seep/19m_depth/S_n.a/GS030/Warm_seep/Roca_Redonda/Galapagos_Islands Red Sea marine 0.27222222 -91.63333 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATAATGTCTAAATTCTTTAACAAGATAAGCCTCATGGCTTTTCTGTCTTTTATTATGTTGCCAAGCATTTCTCAAGCGGCAACACTAAACCCAGGTGACCTTGTTGGTATTTCTTTCTGGGTTATCTCAATTGCAATGGTTGCTGCTACTGTCTTCTTTCTGTGGGAAGCCATGCGCATCGGGGGTAAGTGGTCTACTTCCCTTACAGTTGCTGCATTAGTTACACTAATAGCTGCCGTTCACTATTTCTACATGAGAGATATTTGGGTTGCCTCTGGCGATAGCCCAACAGTTTACCGTTATGTTGACTGGATTCTTACAGTGCCACTACAAATGGTTGAGTTTTACTTGATCTTGGCTGCTGTTGGCGTCGTTGCTGGAAGAGTATTCTGGCATCTTCTAATTGGTACCCTAATAATGCTTCTTGGTGGTTACTTCGGCGAAACAGGTGTACTTACTCCTGTAGTTGGTTTTGTTGTTGGTATGGCAGGTTGGATATACATCCTGTATTACATCTTCTCTGGTGAAGCTGCTAAATCTGCCGAAAATGCTCCCGCAGCTGTTCAATCCGCCTTTAATACTATGAGACTTATTGTACTAGTAGGTTGGGCAATTTATCCTTTGGGTTACGTACTTGGATACATGATGGGTTCTGTGGATGCAGCTTCCTTGAACGGTATCTACAACGTAGCAGATTTTGTTAATAAAATTGCATTCGGATTGATGATTTGGTCAGCAGCTAACTCACATCATAGATTA IMSKFFNKISLMAFLSFIMLPSISQAATLNPGDLVGISFWVISIAMVAATVFFLWEAMRIGGKWSTSLTVAALVTLIAAVHYFYMRDIWVASGDSPTVYRYVDWILTVPLQMVEFYLILAAVGVVAGRVFWHLLIGTLIMLLGGYFGETGVLTPVVGFVVGMAGWIYILYYIFSGEAAKSAENAPAAVQSAFNTMRLIVLVGWAIYPLGYVLGYMMGSVDAASLNGIYNVADFVNKIAFGLMIWSAANSHHRL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATGTCTAAATTCTTTAACAAGATAAGCCTCATGGCTTTT------CTGTCTTTTATTATGTTGCCAAGCATTTCTCAAGCG------GCAACACTAAACCCAGGTGACCTTGTTGGTATTTCTTTCTGGGTTATCTCAATTGCAATGGTTGCTGCTACTGTCTTCTTTCTGTGGGAAGCCATGCGCATCGGGGGT---AAGTGGTCTACTTCCCTTACAGTTGCTGCATTAGTTACACTAATAGCTGCCGTTCACTATTTCTACATGAGAGATATTTGGGTT---------------------------------------------------GCCTCTGGCGATAGCCCAACAGTTTACCGTTATGTTGACTGG------------------------ATTCTTACAGTGCCACTACAAATGGTTGAGTTTTACTTGATCTTGGCTGCT---------GTT---GGCGTCGTTGCTGGA---AGAGTA------------------------------------TTCTGGCAT---CTTCTAATTGGTACCCTAATAATGCTTCTTGGTGGTTACTTCGGCGAA---------ACA------------------GGT------GTA---------------------------------CTT------------------------------------------------------------------ACTCCT------------------GTAGTTGGT---TTTGTTGTTGGTATGGCAGGTTGGATATACATCCTGTATTACATC---------------TTC------TCT---GGTGAAGCTGCTAAA---TCTGCCGAA------AAT---GCTCCCGCAGCTGTT---CAA---TCC---GCC---TTT---AAT---ACTATG---AGACTTATTGTACTAGTA---------------------------------------------------------------GGTTGG---------GCAATTTATCCTTTGGGTTACGTACTTGGATACATG---------------------------------------ATGGGTTCTGTGGATGCAGCTTCCTTGAACGGTATCTACAACGTAGCAGATTTTGTTAATAAAATTGCATTCGGATTGATGATTTGGTCAGCAGCTAACTCACAT---CATAGATTA------------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------IMSKFFNKISLMAF--LSFIMLPSISQA--ATLNPGDLVGISFWVISIAMVAATVFFLWEAMRIGG-KWSTSLTVAALVTLIAAVHYFYMRDIWV-----------------ASGDSPTVYRYVDW--------ILTVPLQMVEFYLILAA---V-GVVAG-RV------------FWH-LLIGTLIMLLGGYFGE---T------G--V-----------L----------------------TP------VVG-FVVGMAGWIYILYYI-----F--S-GEAAK-SAE--N-APAAV-Q-S-A-F-N-TM-RLIVLV---------------------GW---AIYPLGYVLGYM-------------MGSVDAASLNGIYNVADFVNKIAFGLMIWSAANSH-HRL-------------------------------------- [IV-Proteo3-ARCTIC20C09]_1105135721658 [IV-Proteo3-ARCTIC20C09] JCVI_ORF_1105135721658_GS030_Warm_Seep_19m jcvi|1105135721658| 1105135721658 JCVI ORF 1105135721658 1105135721658 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/ARCTIC20C09 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 ARCTIC20C09 Alphaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 09-FEB-2004 Warm_Seep/19m_depth/S_n.a/GS030/Warm_seep/Roca_Redonda/Galapagos_Islands Red Sea marine 0.27222222 -91.63333 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATAATGTCTAAATTCTTTAACAAGATAAGCCTCATGGCTTTTCTGTCTTTTATTATGTTGCCAAGCATTTCTCAAGCGGCAACACTAAACCCAGGTGACCTTGTTGGTATTTCTTTCTGGGTTATCTCAATTGCAATGGTTGCTGCTACTGTCTTCTTTCTGTGGGAAGCCATGCGCATCGGGGGTAAGTGGTCTACTTCCCTTACAGTTGCTGCATTAGTTACACTAATAGCTGCCGTTCACTATTTCTACATGAGAGATATTTGGGTTGCCTCTGGCGATAGCCCAACAGTTTACCGTTATGTTGACTGGATTCTTACAGTGCCACTACAAATGGTTGAGTTTTACTTGATCTTGGCTGCTGTTGGCGTCGTTGCTGGAAGAGTATTCTGGCATCTTCTAATTGGTACCCTAATAATGCTTCTTGGTGGTTACTTCGGCGAAACAGGTGTACTTACTCCTGTAGTTGGTTTTGTTGTTGGTATGGCAGGTTGGATATACATCCTGTATTACATCTTCTCTGGTGAAGCTGCTAAATCTGCCGAAAATGCTCCCGCAGCTGTTCAATCCGCCTTTAATACTATGAGACTTATTGTACTAGTAGGTTGGGCAATTTATCCTTTGGGTTACGTACTTGGATACATGATGGGTTCTGTGGATGCAGCTTCCTTGAACGGTATCTACAACGTAGCAGATTTTGTTAATAAAATTGCATTCGGATTGATGATTTGGTCAGCAGCTAACTCACAATCA IMSKFFNKISLMAFLSFIMLPSISQAATLNPGDLVGISFWVISIAMVAATVFFLWEAMRIGGKWSTSLTVAALVTLIAAVHYFYMRDIWVASGDSPTVYRYVDWILTVPLQMVEFYLILAAVGVVAGRVFWHLLIGTLIMLLGGYFGETGVLTPVVGFVVGMAGWIYILYYIFSGEAAKSAENAPAAVQSAFNTMRLIVLVGWAIYPLGYVLGYMMGSVDAASLNGIYNVADFVNKIAFGLMIWSAANSQS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATGTCTAAATTCTTTAACAAGATAAGCCTCATGGCTTTT------CTGTCTTTTATTATGTTGCCAAGCATTTCTCAAGCG------GCAACACTAAACCCAGGTGACCTTGTTGGTATTTCTTTCTGGGTTATCTCAATTGCAATGGTTGCTGCTACTGTCTTCTTTCTGTGGGAAGCCATGCGCATCGGGGGT---AAGTGGTCTACTTCCCTTACAGTTGCTGCATTAGTTACACTAATAGCTGCCGTTCACTATTTCTACATGAGAGATATTTGGGTT---------------------------------------------------GCCTCTGGCGATAGCCCAACAGTTTACCGTTATGTTGACTGG------------------------ATTCTTACAGTGCCACTACAAATGGTTGAGTTTTACTTGATCTTGGCTGCT---------GTT---GGCGTCGTTGCTGGA---AGAGTA------------------------------------TTCTGGCAT---CTTCTAATTGGTACCCTAATAATGCTTCTTGGTGGTTACTTCGGCGAA---------ACA------------------GGT------GTA---------------------------------CTT------------------------------------------------------------------ACTCCT------------------GTAGTTGGT---TTTGTTGTTGGTATGGCAGGTTGGATATACATCCTGTATTACATC---------------TTC------TCT---GGTGAAGCTGCTAAA---TCTGCCGAA------AAT---GCTCCCGCAGCTGTT---CAA---TCC---GCC---TTT---AAT---ACTATG---AGACTTATTGTACTAGTA---------------------------------------------------------------GGTTGG---------GCAATTTATCCTTTGGGTTACGTACTTGGATACATG---------------------------------------ATGGGTTCTGTGGATGCAGCTTCCTTGAACGGTATCTACAACGTAGCAGATTTTGTTAATAAAATTGCATTCGGATTGATGATTTGGTCAGCAGCTAACTCACAA---TCA------------------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------IMSKFFNKISLMAF--LSFIMLPSISQA--ATLNPGDLVGISFWVISIAMVAATVFFLWEAMRIGG-KWSTSLTVAALVTLIAAVHYFYMRDIWV-----------------ASGDSPTVYRYVDW--------ILTVPLQMVEFYLILAA---V-GVVAG-RV------------FWH-LLIGTLIMLLGGYFGE---T------G--V-----------L----------------------TP------VVG-FVVGMAGWIYILYYI-----F--S-GEAAK-SAE--N-APAAV-Q-S-A-F-N-TM-RLIVLV---------------------GW---AIYPLGYVLGYM-------------MGSVDAASLNGIYNVADFVNKIAFGLMIWSAANSQ-S---------------------------------------- [IV-Proteo3-ARCTIC20C09]_EU795107 [IV-Proteo3-ARCTIC20C09] ARCTIC20_C_9_genomic_EU795107 gi|193084536|gb|EU795107| Uncultured bacterium ARCTIC20 C 09 genomic sequence Uncultured bacterium ARCTIC20 C 09 genomic sequence EU795107 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/ARCTIC20C09 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 ARCTIC20C09 Alphaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:542406 genomic_DNA other 02-juil-08 #na Arctic Arctic Ocean marine 71.4 -156.8 Direct Submission Henn,M.R., Young,S., Jaffe,D.B., Gnerre,S., Berlin,A., Heiman,D., Hepburn,T., Sykes,S., Kirchman,D.L., Cottrell,M.T., Lander,E., Nusbaum,C. and Birren,B. Submitted (21MAY2008) Broad Institute of MIT and Harvard, 320 Charles Street, Cambridge, MA 02141, USA #na #na ATGACACAAAAATTAAAACGATTGCTACTGGCAGCAGTACCGACAAGTGCCTTACTAACACTTCCAAGTATTGCATCTGCCGCGTCGGCAAGTTTAGACCCTAAAGATTCTGTTGGGATTAGCTTTTGGATTATTTCGATTGCTATGGTTGCAGCCACAGTCTTCTTTTTTATGGAAGCTGGTAAGATGACGCCTAAATGGCGTACCTCGGTTGTGGTATCTGGATTGGTAACACTTGTTGCAGCGGTCCATTATTTTTATATGAGAGATGTCTGGGTTGCTACTGGAACGAGCCCCACAGTATTCCGTTATGTTGATTGGCTGATAACTGTCCCTCTTTTAATGGTCGAATTTTACTTCATACTAGCCGCTGTCGGTTTAGCTACGATGAAAGTCTTTTGGAATCTCCTAATTGGAACATTGGTCATGTTATTGGGAGGTTACTGTGGTGAAGTTGGTATTATCAATCCTAGCGCTGGTTTCATAATCGGAATGGCCGGTTGGTTCTATATTCTTTATTATATTTTTGCAGGCGATGCAGGAAAAGCGATGGCTAATGCGTCCGAAGCTGTTCAGACTGCGTTTAAAACAATGCGTATGATTGTTCTCATTGGGTGGGCTATTTATCCCCTAGGATATCTGCTGGGCTACATGATGGGCTCGATAGATGCTAATGCTCTAAATTTAATTTATAACCTTGCTGATTTTGTTAATAAAATAGCATTTGGTCTTATGGTTTGGGCAGCAGCAAGCAGCGAATCAGAAAAAGCT MTQKLKRLLLAAVPTSALLTLPSIASAASASLDPKDSVGISFWIISIAMVAATVFFFMEAGKMTPKWRTSVVVSGLVTLVAAVHYFYMRDVWVATGTSPTVFRYVDWLITVPLLMVEFYFILAAVGLATMKVFWNLLIGTLVMLLGGYCGEVGIINPSAGFIIGMAGWFYILYYIFAGDAGKAMANASEAVQTAFKTMRMIVLIGWAIYPLGYLLGYMMGSIDANALNLIYNLADFVNKIAFGLMVWAAASSESEKA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGACACAAAAATTAAAACGATTGCTACTGGCAGCAGTACCGACAAGTGCCTTACTAACACTTCCAAGTATTGCATCTGCCGCGTCGGCAAGTTTAGACCCTAAAGATTCTGTTGGGATTAGCTTTTGGATTATTTCGATTGCTATGGTTGCAGCCACAGTCTTCTTTTTTATGGAAGCTGGTAAGATGACGCCT---AAATGGCGTACCTCGGTTGTGGTATCTGGATTGGTAACACTTGTTGCAGCGGTCCATTATTTTTATATGAGAGATGTCTGGGTT---------------------------------------------------GCTACTGGAACGAGCCCCACAGTATTCCGTTATGTTGATTGG------------------------CTGATAACTGTCCCTCTTTTAATGGTCGAATTTTACTTCATACTAGCCGCT---------GTC---GGTTTAGCTACGATG---AAAGTC------------------------------------TTTTGGAAT---CTCCTAATTGGAACATTGGTCATGTTATTGGGAGGTTACTGTGGTGAA---------GTT------------------GGT------ATT---------------------------------ATC------------------------------------------------------------------AATCCT------------------AGCGCTGGT---TTCATAATCGGAATGGCCGGTTGGTTCTATATTCTTTATTATATT---------------TTT------GCA---GGCGATGCAGGAAAA---GCGATGGCT------AAT---GCGTCCGAAGCTGTT---CAG---ACT---GCG---TTT---AAA---ACAATG---CGTATGATTGTTCTCATT---------------------------------------------------------------GGGTGG---------GCTATTTATCCCCTAGGATATCTGCTGGGCTACATG---------------------------------------ATGGGCTCGATAGATGCTAATGCTCTAAATTTAATTTATAACCTTGCTGATTTTGTTAATAAAATAGCATTTGGTCTTATGGTTTGGGCAGCAGCAAGCAGCGAA---TCAGAAAAAGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------MTQKLKRLLLAAVPTSALLTLPSIASAASASLDPKDSVGISFWIISIAMVAATVFFFMEAGKMTP-KWRTSVVVSGLVTLVAAVHYFYMRDVWV-----------------ATGTSPTVFRYVDW--------LITVPLLMVEFYFILAA---V-GLATM-KV------------FWN-LLIGTLVMLLGGYCGE---V------G--I-----------I----------------------NP------SAG-FIIGMAGWFYILYYI-----F--A-GDAGK-AMA--N-ASEAV-Q-T-A-F-K-TM-RMIVLI---------------------GW---AIYPLGYLLGYM-------------MGSIDANALNLIYNLADFVNKIAFGLMVWAAASSE-SEKA------------------------------------- [IV-Proteo3-ARCTIC20C09]_KJ926199 [IV-Proteo3-ARCTIC20C09] RHOMEO_AG_OTU19 gb|KJ926199| Uncultured bacterium cloneRHOMEO AG OTU19 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU19 putative proteorhodopsin gene, partial cds KJ926199 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/ARCTIC20C09 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 ARCTIC20C09 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGTTGATTACTGTCCCACTTTTGATGGTTGAATTTTATTTTATCCTTGCCGCCGTTGGTCTAGCGACAATTAAGGTTTTTTGGAACCTCTTAATTGGCACTTTAGTAATGTTAGTTGGTGGTTACCTTGGAGAAGTTGGAGCAATTGATTCGACAGTTGGCTTTGTAATTGGAATGATTGGTTGGTTGTATATCCTTTATTATATCTTTGCTGGTGACGCAGGAACGGCAATGGGTAATGCATCTGAAGGCGTTCAGTCAGCGTTTAAGGCTATGCGCTTAATCGTTTTAATT WLITVPLLMVEFYFILAAVGLATIKVFWNLLIGTLVMLVGGYLGEVGAIDSTVGFVIGMIGWLYILYYIFAGDAGTAMGNASEGVQSAFKAMRLIVLI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGATTACTGTCCCACTTTTGATGGTTGAATTTTATTTTATCCTTGCCGCC---------GTT---GGTCTAGCGACAATT---AAGGTT------------------------------------TTTTGGAAC---CTCTTAATTGGCACTTTAGTAATGTTAGTTGGTGGTTACCTTGGAGAA---------GTT------------------GGA------GCA---------------------------------ATT------------------------------------------------------------------GATTCG------------------ACAGTTGGC---TTTGTAATTGGAATGATTGGTTGGTTGTATATCCTTTATTATATC---------------TTT------GCT---GGTGACGCAGGAACG---GCAATGGGT------AAT---GCATCTGAAGGCGTT---CAG---TCA---GCG---TTT---AAG---GCTATG---CGCTTAATCGTTTTAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYFILAA---V-GLATI-KV------------FWN-LLIGTLVMLVGGYLGE---V------G--A-----------I----------------------DS------TVG-FVIGMIGWLYILYYI-----F--A-GDAGT-AMG--N-ASEGV-Q-S-A-F-K-AM-RLIVLI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_DQ203689 [IV-Proteo3-b] medHO155C8_env_samples_DQ203689 gi|77547826|gb|DQ203689| Uncultured bacterium clone medHO155C8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155C8 predicted proteorhodopsin gene, partial cds DQ203689 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGACTGGCTAATCACTGTGCCACTGCAAATGGTAGAATTTTACCTCATCCTTGCAGCCGTTGGCGCAGCTTCCGCTGGAATATTCTGGCGCCTTTTGATTGGCACGGTTGTGATGCTACTTGGCGGCTACTGTGGTGAAGTTGGTTATGTGAACCAGTGGCTTGGTTTCATTATTGGAATGGCCGGCTGGCTTTACATCTTGTATGAGATCTTTGCAGGAGAAGCAGGCAAGGCATCGGCAGACAAGGCACCGGAGTCAGTCAAATCAGCGTTTAGCGCAATGCGTCTAATCGTAACCGTCGGCTGGGCCATCTATCCA SYIDWLITVPLQMVEFYLILAAVGAASAGIFWRLLIGTVVMLLGGYCGEVGYVNQWLGFIIGMAGWLYILYEIFAGEAGKASADKAPESVKSAFSAMRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGACTGG------------------------CTAATCACTGTGCCACTGCAAATGGTAGAATTTTACCTCATCCTTGCAGCC---------GTT---GGCGCAGCTTCCGCT---GGAATA------------------------------------TTCTGGCGC---CTTTTGATTGGCACGGTTGTGATGCTACTTGGCGGCTACTGTGGTGAA---------GTT------------------GGT------TAT---------------------------------GTG------------------------------------------------------------------AACCAG------------------TGGCTTGGT---TTCATTATTGGAATGGCCGGCTGGCTTTACATCTTGTATGAGATC---------------TTT------GCA---GGAGAAGCAGGCAAGGCATCGGCAGAC------AAG---GCACCGGAGTCAGTC---AAA---TCA---GCG---TTT---AGC---GCAATG---CGTCTAATCGTAACCGTC---------------------------------------------------------------GGCTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQMVEFYLILAA---V-GAASA-GI------------FWR-LLIGTVVMLLGGYCGE---V------G--Y-----------V----------------------NQ------WLG-FIIGMAGWLYILYEI-----F--A-GEAGKASAD--K-APESV-K-S-A-F-S-AM-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_DQ203835 [IV-Proteo3-b] SS114a40F3_env_samples_DQ203835 gi|77548118|gb|DQ203835| Uncultured bacterium clone SS114a40F3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40F3 predicted proteorhodopsin gene, partial cds DQ203835 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATACATTGATTGGCTAATTACTGTGCCGCTGCAAATGGTAGAATTCTACCTTATCCTTGCAGCAGTTGGTGTAGCTTCGGCTGGAATATTCTGGCGCCTTTTAATTGGTTCAGTTGTGATGCTCCTTGGCGGCTACTGTGGTGAAGTCGGGTACCTGAACGCCTGGGTCGGTTTCATCATCGGAATGGCTGGCTGGCTATATATCCTGTATGAGATTTTTGCGGGAGAAGCGGGCAAAGCTTCAGCAGAGAAGGCCCCAGAGTCGGTCAAATCAGCTTTCAGCGCGATGCGTCTGATTGTTACCGTAGGGTGGGCAATCTACCCA RYIDWLITVPLQMVEFYLILAAVGVASAGIFWRLLIGSVVMLLGGYCGEVGYLNAWVGFIIGMAGWLYILYEIFAGEAGKASAEKAPESVKSAFSAMRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATTGATTGG------------------------CTAATTACTGTGCCGCTGCAAATGGTAGAATTCTACCTTATCCTTGCAGCA---------GTT---GGTGTAGCTTCGGCT---GGAATA------------------------------------TTCTGGCGC---CTTTTAATTGGTTCAGTTGTGATGCTCCTTGGCGGCTACTGTGGTGAA---------GTC------------------GGG------TAC---------------------------------CTG------------------------------------------------------------------AACGCC------------------TGGGTCGGT---TTCATCATCGGAATGGCTGGCTGGCTATATATCCTGTATGAGATT---------------TTT------GCG---GGAGAAGCGGGCAAAGCTTCAGCAGAG------AAG---GCCCCAGAGTCGGTC---AAA---TCA---GCT---TTC---AGC---GCGATG---CGTCTGATTGTTACCGTA---------------------------------------------------------------GGGTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYLILAA---V-GVASA-GI------------FWR-LLIGSVVMLLGGYCGE---V------G--Y-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAE--K-APESV-K-S-A-F-S-AM-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_DQ339347 [IV-Proteo3-b] clone_S-S4OM-B2_DQ339347 gi|85681665|gb|DQ339347| Uncultured bacterium clone S-S4OM-B2 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-B2 predicted proteorhodopsin gene, partial cds. DQ339347 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTAATTACTGTGCCGCTGCAAATGGTAGAATTCTACCTTATCCTTGCAGCAGTTGGTGTAGCTTCGGCTGGAATATTCTGGCGCCTTTTAATTGGTTCAGTTGTGATGCTCCTTGGCGGCTACTGTGGTGAAGTCGGGTACCTGAACGCCTGGGTCGGTTTCATCATCGGAATGGCTGGCTGGCTATATATCCTGTATGAGATTTTTGCGGGAGAAGCGGGCAAAGCTTCAGCAGGGAAGGCCCCAGAGTCGGTCAAATCAGCTTTCAGCGCGATGCGTCTGATTGTTACCGTAGGGTGGGCCATTTACCCA RYIDWLITVPLQMVEFYLILAAVGVASAGIFWRLLIGSVVMLLGGYCGEVGYLNAWVGFIIGMAGWLYILYEIFAGEAGKASAGKAPESVKSAFSAMRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACTGTGCCGCTGCAAATGGTAGAATTCTACCTTATCCTTGCAGCA---------GTT---GGTGTAGCTTCGGCT---GGAATA------------------------------------TTCTGGCGC---CTTTTAATTGGTTCAGTTGTGATGCTCCTTGGCGGCTACTGTGGTGAA---------GTC------------------GGG------TAC---------------------------------CTG------------------------------------------------------------------AACGCC------------------TGGGTCGGT---TTCATCATCGGAATGGCTGGCTGGCTATATATCCTGTATGAGATT---------------TTT------GCG---GGAGAAGCGGGCAAAGCTTCAGCAGGG------AAG---GCCCCAGAGTCGGTC---AAA---TCA---GCT---TTC---AGC---GCGATG---CGTCTGATTGTTACCGTA---------------------------------------------------------------GGGTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYLILAA---V-GVASA-GI------------FWR-LLIGSVVMLLGGYCGE---V------G--Y-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAG--K-APESV-K-S-A-F-S-AM-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ926115 [IV-Proteo3-b] BOUM_OTU028_env_samples gb|KJ926115| Uncultured bacterium clone BOUM OTU028 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU028 putative proteorhodopsin gene, partial cds KJ926115 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 39.0995 5.3403333 #na #na #na #na #na GTCGACTGGCTAATTACTGTGCCGCTGCAAATGGTAGAATTCTACCTCATCCTTGCAGCAGTTGGTGTAGCTTCGGCTGGAATATTCTGGCGCCTTTTAATTGGCTCAGTTGTGATGCTTCTTGGCGGCTACTGTGGTGAAGTCGGGTACCTGAACGCCTGGGTTGGTTTCATCATCGGAATGGCTGGCTGGCTGTATATCCTGTATGAGATTTTTGCGGGAGAAGCGGGCAAAGCTTCAGCAGAGAAGGCCCCAGAGTCGGTCAAATCAGCTTTCAGCGCGATGCGTCTGATTGTTACCGTAGGATGGGCAATATAC VDWLITVPLQMVEFYLILAAVGVASAGIFWRLLIGSVVMLLGGYCGEVGYLNAWVGFIIGMAGWLYILYEIFAGEAGKASAEKAPESVKSAFSAMRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCGACTGG------------------------CTAATTACTGTGCCGCTGCAAATGGTAGAATTCTACCTCATCCTTGCAGCA---------GTT---GGTGTAGCTTCGGCT---GGAATA------------------------------------TTCTGGCGC---CTTTTAATTGGCTCAGTTGTGATGCTTCTTGGCGGCTACTGTGGTGAA---------GTC------------------GGG------TAC---------------------------------CTG------------------------------------------------------------------AACGCC------------------TGGGTTGGT---TTCATCATCGGAATGGCTGGCTGGCTGTATATCCTGTATGAGATT---------------TTT------GCG---GGAGAAGCGGGCAAAGCTTCAGCAGAG------AAG---GCCCCAGAGTCGGTC---AAA---TCA---GCT---TTC---AGC---GCGATG---CGTCTGATTGTTACCGTA---------------------------------------------------------------GGATGG---------GCAATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPLQMVEFYLILAA---V-GVASA-GI------------FWR-LLIGSVVMLLGGYCGE---V------G--Y-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAE--K-APESV-K-S-A-F-S-AM-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_DQ203795 [IV-Proteo3-b] ss114a402_env_samples_DQ203795 gi|77548038|gb|DQ203795| Uncultured bacterium clone ss114a402 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone ss114a402 predicted proteorhodopsin gene, partial cds DQ203795 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTGATTACTGTGCCGCTGCAAATGGTAGAATTCTACCTTATCCTTGCAGCAGTTGGTGTAGCTTCGGCCGGTATATTCTGGCGCCTTTTGATTGGCTCAGTTGTGATGCTCCTTGGCGGTTACTGTGGTGAAGTCGGGTACCTGAACGCCTGGGTTGGTTTCATCATCGGGATGGCTGGCTGGCTGTATATCCTGTATGAGATTTTTGCGGGAGAAGCGGGCAAAGCCTCAGCAGAGAAGGCCCCAGAGTCGGTTAAATCAGCTTTCAGCGCGATGCGTCTGATTGTTACCGTGGGGTGGGCGATTTATCCA RYIDWLITVPLQMVEFYLILAAVGVASAGIFWRLLIGSVVMLLGGYCGEVGYLNAWVGFIIGMAGWLYILYEIFAGEAGKASAEKAPESVKSAFSAMRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTGATTACTGTGCCGCTGCAAATGGTAGAATTCTACCTTATCCTTGCAGCA---------GTT---GGTGTAGCTTCGGCC---GGTATA------------------------------------TTCTGGCGC---CTTTTGATTGGCTCAGTTGTGATGCTCCTTGGCGGTTACTGTGGTGAA---------GTC------------------GGG------TAC---------------------------------CTG------------------------------------------------------------------AACGCC------------------TGGGTTGGT---TTCATCATCGGGATGGCTGGCTGGCTGTATATCCTGTATGAGATT---------------TTT------GCG---GGAGAAGCGGGCAAAGCCTCAGCAGAG------AAG---GCCCCAGAGTCGGTT---AAA---TCA---GCT---TTC---AGC---GCGATG---CGTCTGATTGTTACCGTG---------------------------------------------------------------GGGTGG---------GCGATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYLILAA---V-GVASA-GI------------FWR-LLIGSVVMLLGGYCGE---V------G--Y-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAE--K-APESV-K-S-A-F-S-AM-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_1105148443644 [IV-Proteo3-b] JCVI_ORF_1105148443644 jcvi|1105148443644| 1105148443644 JCVI ORF 1105148443644 1105148443644 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 09-janv-04 Open_Ocean/2m_depth/S_35.8_psu/GS017/Yucatan_Channel/Caribbean_Sea Caribbean Sea marine 20.5225 -85.41361 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATTAATCACGTACATTCGATGGAGAGAATGAAAATGAAACTCAATATTAGCAAGTTTTTTACATATGCGTTGGCGGCGACTTTTATAGGACTGCCGTCCATAGCCTTCGCGGCTGATGGTAATCTTAAGTCAGACGATCTTGTTGGAATGACCTTTTGGCTTATTTCAATAGGCATGGTCGCAGCTACGGCCTTCTTCTTTCTTGAAACACAGAGAGTTTCTGGAAAGTGGAAGACATCATTAACCGTTATCGGCCTCGTCACGCTTGTGGCTGCTGTGCATTACTTCTACATGCGCGATGTATGGGTATCTTCGGGGGAAACGCCGATCGTATACCGTTACATCGATTGGCTAATTACTGTGCCGCTGCAAATGGTAGAATTCTACCTTATCCTTGCAGCAGTTGGTGTAGCTTCGGCTGGAATATTCTGGCGCCTTTTGATTGGCTCAGTTGTGATGCTCCTTGGCGGCTACTGTGGTGAAGTCGGGTACCTGAATGCCTGGGTTGGTTTCATCATCGGAATGGCTGGCTGGCTATATATCCTGTACGAGATTTTTGCGGGAGAAGCGGGCAAAGCCTCAGCAGAGAAAGCCCCAGAGTCGGTCAAATCAGCTTTTAGCGCGATGCGCTTGATTGTTACCGTAGTTGGGCAATTTACCCAATTGGTTATTTCTACGTTACCTTGCGGGTGTGGATGCTGCTGGCGCGGCCGATGCGTTAAACATCATCTACAACATTGC INHVHSMERMKMKLNISKFFTYALAATFIGLPSIAFAADGNLKSDDLVGMTFWLISIGMVAATAFFFLETQRVSGKWKTSLTVIGLVTLVAAVHYFYMRDVWVSSGETPIVYRYIDWLITVPLQMVEFYLILAAVGVASAGIFWRLLIGSVVMLLGGYCGEVGYLNAWVGFIIGMAGWLYILYEIFAGEAGKASAEKAPESVKSAFSAMRLIVTVVGQFTQLVISTLPCGCGCCWRGRCVKHHLQHC ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAATCACGTACATTCGATGGAGAGAATGAAAATGAAACTCAATATTAGCAAGTTTTTTACATATGCGTTGGCGGCGACTTTTATAGGACTGCCGTCCATAGCCTTCGCGGCTGATGGTAATCTTAAGTCAGACGATCTTGTTGGAATGACCTTTTGGCTTATTTCAATAGGCATGGTCGCAGCTACGGCCTTCTTCTTTCTTGAAACACAGAGAGTTTCTGGA---AAGTGGAAGACATCATTAACCGTTATCGGCCTCGTCACGCTTGTGGCTGCTGTGCATTACTTCTACATGCGCGATGTATGGGTA------------------------------TCTTCG---------------------GGGGAAACGCCGATCGTATACCGTTACATCGATTGG------------------------CTAATTACTGTGCCGCTGCAAATGGTAGAATTCTACCTTATCCTTGCAGCA---------GTT---GGTGTAGCTTCGGCT---GGAATA------------------------------------TTCTGGCGC---CTTTTGATTGGCTCAGTTGTGATGCTCCTTGGCGGCTACTGTGGTGAA---------GTC------------------GGG------TAC---------------------------------CTG------------------------------------------------------------------AATGCC------------------TGGGTTGGT---TTCATCATCGGAATGGCTGGCTGGCTATATATCCTGTACGAGATT---------------TTT------GCG---GGAGAAGCGGGCAAAGCCTCAGCAGAG------AAA---GCCCCAGAGTCGGTC---AAA---TCA---GCT---TTT---AGC---GCGATG---CGCTTGATTGTTACCGTAGTTGGGCAATTTACCCAATTGGTTATTTCTACGTTACCTTGCGGGTGTGGATGCTGCTGGCGCGGCCGA---------TGCGTTAAACATCATCTACAACATTGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------INHVHSMERMKMKLNISKFFTYALAATFIGLPSIAFAADGNLKSDDLVGMTFWLISIGMVAATAFFFLETQRVSG-KWKTSLTVIGLVTLVAAVHYFYMRDVWV----------SS-------GETPIVYRYIDW--------LITVPLQMVEFYLILAA---V-GVASA-GI------------FWR-LLIGSVVMLLGGYCGE---V------G--Y-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAE--K-APESV-K-S-A-F-S-AM-RLIVTVVGQFTQLVISTLPCGCGCCWRGR---CVKHHLQHC--------------------------------------------------------------------------------------------- [IV-Proteo3-b]_DQ339388 [IV-Proteo3-b] clone_S-S4OM-F11_DQ339388 gi|85681747|gb|DQ339388| Uncultured bacterium clone S-S4OM-F11 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-F11 predicted proteorhodopsin gene, partial cds. DQ339388 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCATCACTGTGCCGCTGCAAATGGTCGAATTCTACCTTATCCTTGCAGCAGTTGGTGTAGCTTCGGCTGGAATATTCTGGCGCCTTTTGATTGGCTCTGTTGTAATGCTCCTTGGCGGCTACTGTGGTGAAGTCGGGTACCTGAACGCCTGGGTTGGTTTCATCATCGGAATGGCTGGCTGGCTGTATATCCTGTACGAGATTTTTGCGGGAGAAGTGGGCAAAGCCTCAGCAGAGAAGGCCCCGGAGTCGGTCAAATCAGCTTTCAGCGCGATGCGCTTGATTGTTACCGTAGGGTGGGCAATTTATCCA RYIDWLITVPLQMVEFYLILAAVGVASAGIFWRLLIGSVVMLLGGYCGEVGYLNAWVGFIIGMAGWLYILYEIFAGEVGKASAEKAPESVKSAFSAMRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATCACTGTGCCGCTGCAAATGGTCGAATTCTACCTTATCCTTGCAGCA---------GTT---GGTGTAGCTTCGGCT---GGAATA------------------------------------TTCTGGCGC---CTTTTGATTGGCTCTGTTGTAATGCTCCTTGGCGGCTACTGTGGTGAA---------GTC------------------GGG------TAC---------------------------------CTG------------------------------------------------------------------AACGCC------------------TGGGTTGGT---TTCATCATCGGAATGGCTGGCTGGCTGTATATCCTGTACGAGATT---------------TTT------GCG---GGAGAAGTGGGCAAAGCCTCAGCAGAG------AAG---GCCCCGGAGTCGGTC---AAA---TCA---GCT---TTC---AGC---GCGATG---CGCTTGATTGTTACCGTA---------------------------------------------------------------GGGTGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYLILAA---V-GVASA-GI------------FWR-LLIGSVVMLLGGYCGE---V------G--Y-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEVGKASAE--K-APESV-K-S-A-F-S-AM-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_DQ203736 [IV-Proteo3-b] ss114a02_env_samples_DQ203736 gi|77547920|gb|DQ203736| Uncultured bacterium clone ss114a02 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone ss114a02 predicted proteorhodopsin gene, partial cds DQ203736 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGATTGGCTAATTACCGTGCCACTCCAAATGGTAGAATTCTACCTGATCCTTGCGGCTGTTGGCGCAGCTTCCTCCGGAATATTCTGGCGCCTTTTGATTGGCACAGTTGTTATGCTCCTTGGCGGCTACTGTGGTGAGGTCGGCTACCTGAACGCCTGGGTAGGTTTCATCATCGGAATGGCTGGCTGGCTGTATATCCTGTATGAAATTTTTGCGGGAGAAGCGGGCAAAGCATCCGCAGACAAAGCCCCAGAGTCGGTCAAATCAGCTTTTAGTGCAATGCGCTTGATCGTTACCGTAGGGTGGGCCATTTATCCA SYIDWLITVPLQMVEFYLILAAVGAASSGIFWRLLIGTVVMLLGGYCGEVGYLNAWVGFIIGMAGWLYILYEIFAGEAGKASADKAPESVKSAFSAMRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGATTGG------------------------CTAATTACCGTGCCACTCCAAATGGTAGAATTCTACCTGATCCTTGCGGCT---------GTT---GGCGCAGCTTCCTCC---GGAATA------------------------------------TTCTGGCGC---CTTTTGATTGGCACAGTTGTTATGCTCCTTGGCGGCTACTGTGGTGAG---------GTC------------------GGC------TAC---------------------------------CTG------------------------------------------------------------------AACGCC------------------TGGGTAGGT---TTCATCATCGGAATGGCTGGCTGGCTGTATATCCTGTATGAAATT---------------TTT------GCG---GGAGAAGCGGGCAAAGCATCCGCAGAC------AAA---GCCCCAGAGTCGGTC---AAA---TCA---GCT---TTT---AGT---GCAATG---CGCTTGATCGTTACCGTA---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQMVEFYLILAA---V-GAASS-GI------------FWR-LLIGTVVMLLGGYCGE---V------G--Y-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAD--K-APESV-K-S-A-F-S-AM-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_DQ339178 [IV-Proteo3-b] clone_S-SOM-B7_DQ339178 gi|85681333|gb|DQ339178| Uncultured bacterium clone S-SOM-B7 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-B7 predicted proteorhodopsin gene, partial cds. DQ339178 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTACTCACTGTGCCACTGCAAATGATTGAGTTCTATCTTATTTTGGCGGCTATTGGTGTGGCCAGCATTGGTATATTCTGGCGCTTATTAGTCGGAACACTCATCATGCTAGTGGCTGGATACATGGGTGAAGCCGGTATTCTAATCAGCCCAACGGTTGGTTTCGTCATTGGTATGGCTGGATGGTTCTACATCCTGTACGAAATATTCGCGGGTGAAGCGGGTAAAGCGGCTGCCAATGAGGCGTCTGCTGCCGTGCAGAGCTCATTCAATGCGATGCGCTTGATCGTTACAGTTGGTTGGGCCATCTACCCA RYIDWLLTVPLQMIEFYLILAAIGVASIGIFWRLLVGTLIMLVAGYMGEAGILISPTVGFVIGMAGWFYILYEIFAGEAGKAAANEASAAVQSSFNAMRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTCACTGTGCCACTGCAAATGATTGAGTTCTATCTTATTTTGGCGGCT---------ATT---GGTGTGGCCAGCATT---GGTATA------------------------------------TTCTGGCGC---TTATTAGTCGGAACACTCATCATGCTAGTGGCTGGATACATGGGTGAA---------GCC------------------GGTATT---CTA---------------------------------ATC------------------------------------------------------------------AGCCCA------------------ACGGTTGGT---TTCGTCATTGGTATGGCTGGATGGTTCTACATCCTGTACGAAATA---------------TTC------GCG---GGTGAAGCGGGTAAAGCGGCTGCCAAT------GAG---GCGTCTGCTGCCGTG---CAG---AGC---TCA---TTC---AAT---GCGATG---CGCTTGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQMIEFYLILAA---I-GVASI-GI------------FWR-LLVGTLIMLVAGYMGE---A------GI-L-----------I----------------------SP------TVG-FVIGMAGWFYILYEI-----F--A-GEAGKAAAN--E-ASAAV-Q-S-S-F-N-AM-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_DQ339169 [IV-Proteo3-b] clone_S-SOM-B1_DQ339169 gi|85681315|gb|DQ339169| Uncultured bacterium clone S-SOM-B1 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-B1 predicted proteorhodopsin gene, partial cds. DQ339169 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTACTCACTGTGCCACTGCAAATGATTGAGTTCTATCTTATTTTGGCGGCTATTGGTGTGGCCAGCATTGGTATATTCTGGCGCTTATTAGTCGGAACACTCATCATGCTAGTGGCTGGATACATGGGTGAAGCCGGTATTCTAATCAGCCCAACGGTTGGTTTCGTCATTGGTATGGCTGGATGGTTCTACATCCTGTACGAAATATTCGCGGGTGAAGCGGGTAAAGCGGCTGCCAATGAGGCGTCTGCTGCCGTGCAGAGCTCATTCAATGCGATGCGCTTGATCGTTACAGTTGGTTGGGCCATTTACCCA RYIDWLLTVPLQMIEFYLILAAIGVASIGIFWRLLVGTLIMLVAGYMGEAGILISPTVGFVIGMAGWFYILYEIFAGEAGKAAANEASAAVQSSFNAMRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTCACTGTGCCACTGCAAATGATTGAGTTCTATCTTATTTTGGCGGCT---------ATT---GGTGTGGCCAGCATT---GGTATA------------------------------------TTCTGGCGC---TTATTAGTCGGAACACTCATCATGCTAGTGGCTGGATACATGGGTGAA---------GCC------------------GGTATT---CTA---------------------------------ATC------------------------------------------------------------------AGCCCA------------------ACGGTTGGT---TTCGTCATTGGTATGGCTGGATGGTTCTACATCCTGTACGAAATA---------------TTC------GCG---GGTGAAGCGGGTAAAGCGGCTGCCAAT------GAG---GCGTCTGCTGCCGTG---CAG---AGC---TCA---TTC---AAT---GCGATG---CGCTTGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQMIEFYLILAA---I-GVASI-GI------------FWR-LLVGTLIMLVAGYMGE---A------GI-L-----------I----------------------SP------TVG-FVIGMAGWFYILYEI-----F--A-GEAGKAAAN--E-ASAAV-Q-S-S-F-N-AM-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_DQ339204 [IV-Proteo3-b] clone_S-SOM-E1_DQ339204 gi|85681385|gb|DQ339204| Uncultured bacterium clone S-SOM-E1 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-E1 predicted proteorhodopsin gene, partial cds. DQ339204 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTACTCACTGTGCCACTGCAAATGATTGAGTTCTATCTTATTTTGGCGGCTATTGGTGTGGCCAGCATTGGTATATTCTGGCGCTTATTAGTCGGAACACTCATCATGCTAGTGGCTGGATACATGGGTGAAGCCGGTATTCTAATCAGCCCAACGGTTGGTTTCGTCATTGGTATGGCTGGATGGTTCTACATCCTGTACGAAATATTCGCGGGTGAAGCGGGTAAAGCGGCTGCCAATGAGGCGTCTGCTGCCGTGCAGAGCTCATTCAATGCGATGCGCTTGATCGTTACAGTTGGTTGGGCCATCTATCCA RYIDWLLTVPLQMIEFYLILAAIGVASIGIFWRLLVGTLIMLVAGYMGEAGILISPTVGFVIGMAGWFYILYEIFAGEAGKAAANEASAAVQSSFNAMRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTCACTGTGCCACTGCAAATGATTGAGTTCTATCTTATTTTGGCGGCT---------ATT---GGTGTGGCCAGCATT---GGTATA------------------------------------TTCTGGCGC---TTATTAGTCGGAACACTCATCATGCTAGTGGCTGGATACATGGGTGAA---------GCC------------------GGTATT---CTA---------------------------------ATC------------------------------------------------------------------AGCCCA------------------ACGGTTGGT---TTCGTCATTGGTATGGCTGGATGGTTCTACATCCTGTACGAAATA---------------TTC------GCG---GGTGAAGCGGGTAAAGCGGCTGCCAAT------GAG---GCGTCTGCTGCCGTG---CAG---AGC---TCA---TTC---AAT---GCGATG---CGCTTGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQMIEFYLILAA---I-GVASI-GI------------FWR-LLVGTLIMLVAGYMGE---A------GI-L-----------I----------------------SP------TVG-FVIGMAGWFYILYEI-----F--A-GEAGKAAAN--E-ASAAV-Q-S-S-F-N-AM-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_DQ339168 [IV-Proteo3-b] clone_S-SOM-A9_DQ339168 gi|85681313|gb|DQ339168| Uncultured bacterium clone S-SOM-A9 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-A9 predicted proteorhodopsin gene, partial cds. DQ339168 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTACTCACTGTGCCACTGCAAATGATTGAGTTCTATCTTATTTTGGCGGCTATTGGTGTGGCCAGCATTGGTATATTCTGGCGCTTATTAGTCGGAACACTCATCATGCTAGTGGCTGGATACATGGGTGAAGCCGGTATTCTAATCAGCCCAACGGTTGGTTTCGTCATTGGTATGGCTGGATGGTTCTACATCCTGTACGAAATATTCGCGGGTGAAGCGGGTAAAGCGGCTGCCAATGAGGCGTCTGCTGCCGTGCAGAGCTCATTCAATGCGATGCGCTTGATCGTTACAGTTGGTTGGGCCATCTATCCA RYIDWLLTVPLQMIEFYLILAAIGVASIGIFWRLLVGTLIMLVAGYMGEAGILISPTVGFVIGMAGWFYILYEIFAGEAGKAAANEASAAVQSSFNAMRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTCACTGTGCCACTGCAAATGATTGAGTTCTATCTTATTTTGGCGGCT---------ATT---GGTGTGGCCAGCATT---GGTATA------------------------------------TTCTGGCGC---TTATTAGTCGGAACACTCATCATGCTAGTGGCTGGATACATGGGTGAA---------GCC------------------GGTATT---CTA---------------------------------ATC------------------------------------------------------------------AGCCCA------------------ACGGTTGGT---TTCGTCATTGGTATGGCTGGATGGTTCTACATCCTGTACGAAATA---------------TTC------GCG---GGTGAAGCGGGTAAAGCGGCTGCCAAT------GAG---GCGTCTGCTGCCGTG---CAG---AGC---TCA---TTC---AAT---GCGATG---CGCTTGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQMIEFYLILAA---I-GVASI-GI------------FWR-LLVGTLIMLVAGYMGE---A------GI-L-----------I----------------------SP------TVG-FVIGMAGWFYILYEI-----F--A-GEAGKAAAN--E-ASAAV-Q-S-S-F-N-AM-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_DQ339161 [IV-Proteo3-b] clone_S-SOM-A2_DQ339161 gi|85681299|gb|DQ339161| Uncultured bacterium clone S-SOM-A2 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-A2 predicted proteorhodopsin gene, partial cds. DQ339161 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTACTCACTGTGCCACTGCAAATGATTGAGTTCTATCTTATTTTGGCGGCTATTGGTGTGGCCAGCATTGGTATATTCTGGCGCTTATTAGTCGGAACACTCATCATGCTAGTGGCTGGATACATGGGTGAAGCCGGTATTCTAATCAGCCCAACGGTTGGTTTCGTCATTGGTATGGCTGGATGGTTCTACATCCTGTACGAAATATTCGCGGGTGAAGCGGGTAAAGCGGCTGCCAATGAGGCGTCTGCTGCCGTGCAGAGCTCATTCAATGCGATGCGCTTGATCGTTACAGTTGGTTGGGCCATATATCCA RYIDWLLTVPLQMIEFYLILAAIGVASIGIFWRLLVGTLIMLVAGYMGEAGILISPTVGFVIGMAGWFYILYEIFAGEAGKAAANEASAAVQSSFNAMRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTCACTGTGCCACTGCAAATGATTGAGTTCTATCTTATTTTGGCGGCT---------ATT---GGTGTGGCCAGCATT---GGTATA------------------------------------TTCTGGCGC---TTATTAGTCGGAACACTCATCATGCTAGTGGCTGGATACATGGGTGAA---------GCC------------------GGTATT---CTA---------------------------------ATC------------------------------------------------------------------AGCCCA------------------ACGGTTGGT---TTCGTCATTGGTATGGCTGGATGGTTCTACATCCTGTACGAAATA---------------TTC------GCG---GGTGAAGCGGGTAAAGCGGCTGCCAAT------GAG---GCGTCTGCTGCCGTG---CAG---AGC---TCA---TTC---AAT---GCGATG---CGCTTGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQMIEFYLILAA---I-GVASI-GI------------FWR-LLVGTLIMLVAGYMGE---A------GI-L-----------I----------------------SP------TVG-FVIGMAGWFYILYEI-----F--A-GEAGKAAAN--E-ASAAV-Q-S-S-F-N-AM-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_DQ339166 [IV-Proteo3-b] clone_S-SOM-A7_DQ339166 gi|85681309|gb|DQ339166| Uncultured bacterium clone S-SOM-A7 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-A7 predicted proteorhodopsin gene, partial cds. DQ339166 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTACTCACTGTGCCACTGCAAATGATTGAGTTCTATCTTATTTTGGCGGCTATTGGTGTGGCCAGCATTGGTATATTCTGGCGCTTATTAGTCGGAACACTCATCATGCTAGTGGCTGGATACATGGGTGAAGCCGGTATTCTAATCAGCCCAACGGTTGGTTTCGTCATTGGTATGGCTGGATGGTTCTACATCCTGTACGAAATATTCGCGGGTGAAGCGGGTAAAGCGGCTGCCAATGAGGCGTCTGCTGCCGTGCAGAGCTCATTCAATGCGATGCGCTTGATCGTTACAGTTGGTTGGGCCATCTATCCA RYIDWLLTVPLQMIEFYLILAAIGVASIGIFWRLLVGTLIMLVAGYMGEAGILISPTVGFVIGMAGWFYILYEIFAGEAGKAAANEASAAVQSSFNAMRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTCACTGTGCCACTGCAAATGATTGAGTTCTATCTTATTTTGGCGGCT---------ATT---GGTGTGGCCAGCATT---GGTATA------------------------------------TTCTGGCGC---TTATTAGTCGGAACACTCATCATGCTAGTGGCTGGATACATGGGTGAA---------GCC------------------GGTATT---CTA---------------------------------ATC------------------------------------------------------------------AGCCCA------------------ACGGTTGGT---TTCGTCATTGGTATGGCTGGATGGTTCTACATCCTGTACGAAATA---------------TTC------GCG---GGTGAAGCGGGTAAAGCGGCTGCCAAT------GAG---GCGTCTGCTGCCGTG---CAG---AGC---TCA---TTC---AAT---GCGATG---CGCTTGATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQMIEFYLILAA---I-GVASI-GI------------FWR-LLVGTLIMLVAGYMGE---A------GI-L-----------I----------------------SP------TVG-FVIGMAGWFYILYEI-----F--A-GEAGKAAAN--E-ASAAV-Q-S-S-F-N-AM-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_DQ339195 [IV-Proteo3-b] clone_S-SOM-D12_DQ339195 gi|85681367|gb|DQ339195| Uncultured bacterium clone S-SOM-D12 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-D12 predicted proteorhodopsin gene, partial cds. DQ339195 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTACTCACTGTGCCACTGCAAATGATTGAGTTCTATCTTATTTTGGCGGCTATTGGTGTGGCCAGCATTGGTATATTCTGGCGCTTATTAGTCGGAACACTCATCATGCTAGTGGCTGGATACATGGGTGAAGCCGGTATTCTAATCAGCCCAACGGTTGGTTTCGTCATTGGTATGGCTGGATGGTTCTACATCCTGTACGAAATATTCGCGGGTGAAGCGGGTAAAGCGGCTGCCAATGAGGCGTCTGCTGCCGTGCAGAGCTCATTCAATGCGATGCGCTTGATCGTTACAGTTGGGTGGGCCATCTATCCA RYIDWLLTVPLQMIEFYLILAAIGVASIGIFWRLLVGTLIMLVAGYMGEAGILISPTVGFVIGMAGWFYILYEIFAGEAGKAAANEASAAVQSSFNAMRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTCACTGTGCCACTGCAAATGATTGAGTTCTATCTTATTTTGGCGGCT---------ATT---GGTGTGGCCAGCATT---GGTATA------------------------------------TTCTGGCGC---TTATTAGTCGGAACACTCATCATGCTAGTGGCTGGATACATGGGTGAA---------GCC------------------GGTATT---CTA---------------------------------ATC------------------------------------------------------------------AGCCCA------------------ACGGTTGGT---TTCGTCATTGGTATGGCTGGATGGTTCTACATCCTGTACGAAATA---------------TTC------GCG---GGTGAAGCGGGTAAAGCGGCTGCCAAT------GAG---GCGTCTGCTGCCGTG---CAG---AGC---TCA---TTC---AAT---GCGATG---CGCTTGATCGTTACAGTT---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQMIEFYLILAA---I-GVASI-GI------------FWR-LLVGTLIMLVAGYMGE---A------GI-L-----------I----------------------SP------TVG-FVIGMAGWFYILYEI-----F--A-GEAGKAAAN--E-ASAAV-Q-S-S-F-N-AM-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_DQ339232 [IV-Proteo3-b] clone_S-SOM-G2_DQ339232 gi|85681441|gb|DQ339232| Uncultured bacterium clone S-SOM-G2 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-G2 predicted proteorhodopsin gene, partial cds. DQ339232 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGCTACATAGACTGGCTACTCACTGTGCCACTGCAAATGATTGAGTTCTATCTTATTTTGGCGGCTATTGGTGTGGCCAGCATTGGTATATTCTGGCGCTTATTAGTCGGAACACTCATCATGCTAGTGGCTGGATACATGGGTGAAGCCGGTATTCTAATCAGCCCAACGGTTGGTTTCGTCATTGGTATGGCTGGATGGTTCTACATCCTGTACGAAATATTCGCGGGTGAAGCGGGTAAAGCGGCTGCCAATGAGGCGTCTGCTGCCGTGCAGAGCTCATTCAATGCGATGCGCTTGATCGTTACAGTTGGGTGGGCAATTTATCCA SYIDWLLTVPLQMIEFYLILAAIGVASIGIFWRLLVGTLIMLVAGYMGEAGILISPTVGFVIGMAGWFYILYEIFAGEAGKAAANEASAAVQSSFNAMRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATAGACTGG------------------------CTACTCACTGTGCCACTGCAAATGATTGAGTTCTATCTTATTTTGGCGGCT---------ATT---GGTGTGGCCAGCATT---GGTATA------------------------------------TTCTGGCGC---TTATTAGTCGGAACACTCATCATGCTAGTGGCTGGATACATGGGTGAA---------GCC------------------GGTATT---CTA---------------------------------ATC------------------------------------------------------------------AGCCCA------------------ACGGTTGGT---TTCGTCATTGGTATGGCTGGATGGTTCTACATCCTGTACGAAATA---------------TTC------GCG---GGTGAAGCGGGTAAAGCGGCTGCCAAT------GAG---GCGTCTGCTGCCGTG---CAG---AGC---TCA---TTC---AAT---GCGATG---CGCTTGATCGTTACAGTT---------------------------------------------------------------GGGTGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LLTVPLQMIEFYLILAA---I-GVASI-GI------------FWR-LLVGTLIMLVAGYMGE---A------GI-L-----------I----------------------SP------TVG-FVIGMAGWFYILYEI-----F--A-GEAGKAAAN--E-ASAAV-Q-S-S-F-N-AM-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_DQ339393 [IV-Proteo3-b] clone_S-S4OM-F7_DQ339393 gi|85681757|gb|DQ339393| Uncultured bacterium clone S-S4OM-F7 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-F7 predicted proteorhodopsin gene, partial cds. DQ339393 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTACTCACTGTGCCACTGCAAATGATTGAGTTCTATCTTATTTTGGCGGCTATTGGTGTGGCCAGCATTGGTATATTCTGGCGCTTATTAGTCGGAACACTCATCATGCTAGTGGCTGGATACATGGGTGAAGCCGGTATTCTAATCAGCCCAACGGTTGGTTTCGTCATTGGTATGGCTGGATGGTTCTACATCCTGTACGAAATATTCGCGGGTGAAGCGGGTAAAGCGGCTGCCAATGAGGCGTCTGCTGCCGTGCAGAGCTCATTCAATGCGATGCGCTTGATCGTTACAGTTGGGTGGGCAATATATCCA RYIDWLLTVPLQMIEFYLILAAIGVASIGIFWRLLVGTLIMLVAGYMGEAGILISPTVGFVIGMAGWFYILYEIFAGEAGKAAANEASAAVQSSFNAMRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTCACTGTGCCACTGCAAATGATTGAGTTCTATCTTATTTTGGCGGCT---------ATT---GGTGTGGCCAGCATT---GGTATA------------------------------------TTCTGGCGC---TTATTAGTCGGAACACTCATCATGCTAGTGGCTGGATACATGGGTGAA---------GCC------------------GGTATT---CTA---------------------------------ATC------------------------------------------------------------------AGCCCA------------------ACGGTTGGT---TTCGTCATTGGTATGGCTGGATGGTTCTACATCCTGTACGAAATA---------------TTC------GCG---GGTGAAGCGGGTAAAGCGGCTGCCAAT------GAG---GCGTCTGCTGCCGTG---CAG---AGC---TCA---TTC---AAT---GCGATG---CGCTTGATCGTTACAGTT---------------------------------------------------------------GGGTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQMIEFYLILAA---I-GVASI-GI------------FWR-LLVGTLIMLVAGYMGE---A------GI-L-----------I----------------------SP------TVG-FVIGMAGWFYILYEI-----F--A-GEAGKAAAN--E-ASAAV-Q-S-S-F-N-AM-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_DQ339202 [IV-Proteo3-b] clone_S-SOM-D8_DQ339202 gi|85681381|gb|DQ339202| Uncultured bacterium clone S-SOM-D8 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-D8 predicted proteorhodopsin gene, partial cds. DQ339202 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATATATAGACTGGCTACTCACTGTGCCACTGCAAATGATTGAGTTCTATCTTATTTTGGCGGCTATTGGTGTGGCCAGCATTGGTATATTCTGGCGCTTATTAGTCGGAACACTCATCATGCTAGTGGCTGGATACATGGGTGAAGCCGGTATTCTAATCAGCCCAACGGTTGGTTTCGTCATTGGTATGGCTGGATGGTTCTACATCCTGTACGAAATATTCGCGGGTGAAGCGGGTAAAGCGGCTGCCAATGAGGCGTCTGCTGCCGTGCAGAGCTCATTCAATGCGATGCGCTTGATCGTTACAGTTGGGTGGGCAATTTATCCA RYIDWLLTVPLQMIEFYLILAAIGVASIGIFWRLLVGTLIMLVAGYMGEAGILISPTVGFVIGMAGWFYILYEIFAGEAGKAAANEASAAVQSSFNAMRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATAGACTGG------------------------CTACTCACTGTGCCACTGCAAATGATTGAGTTCTATCTTATTTTGGCGGCT---------ATT---GGTGTGGCCAGCATT---GGTATA------------------------------------TTCTGGCGC---TTATTAGTCGGAACACTCATCATGCTAGTGGCTGGATACATGGGTGAA---------GCC------------------GGTATT---CTA---------------------------------ATC------------------------------------------------------------------AGCCCA------------------ACGGTTGGT---TTCGTCATTGGTATGGCTGGATGGTTCTACATCCTGTACGAAATA---------------TTC------GCG---GGTGAAGCGGGTAAAGCGGCTGCCAAT------GAG---GCGTCTGCTGCCGTG---CAG---AGC---TCA---TTC---AAT---GCGATG---CGCTTGATCGTTACAGTT---------------------------------------------------------------GGGTGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQMIEFYLILAA---I-GVASI-GI------------FWR-LLVGTLIMLVAGYMGE---A------GI-L-----------I----------------------SP------TVG-FVIGMAGWFYILYEI-----F--A-GEAGKAAAN--E-ASAAV-Q-S-S-F-N-AM-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-a]_DQ203395 [IV-Proteo3-a] MedHO102E7_env_samples_DQ203395 gi|77547238|gb|DQ203395| Uncultured bacterium clone MedHO102E7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102E7 predicted proteorhodopsin gene, partial cds DQ203395 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTACATAGATTGGCTCCTAACCGTTCCACTTCAGATGATAGAATTCTATCTAATTCTTGCAGCAGTTGGCGCAGCAACCGCTGGAATTTTCTGGAGACTTCTAATTGGTACACTTATAATGCTTATTGGTGGCTTTATGGGTGAAGCTGGTTACATAAATGCAACTGTTGGCTTCATAATCGGCATGGCAGGATGGATTTATATTTTGTACGAAGTCTTTGCCGGTGAAGCTGCACAAGCTAGTGCATCAAGTAACTCGGAAGGAATGAAATCAGCATTCAATGCATTAAAATGGATTGTATCAATCGGTTGGGCAATTTACCCA RYIDWLLTVPLQMIEFYLILAAVGAATAGIFWRLLIGTLIMLIGGFMGEAGYINATVGFIIGMAGWIYILYEVFAGEAAQASASSNSEGMKSAFNALKWIVSIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATAGATTGG------------------------CTCCTAACCGTTCCACTTCAGATGATAGAATTCTATCTAATTCTTGCAGCA---------GTT---GGCGCAGCAACCGCT---GGAATT------------------------------------TTCTGGAGA---CTTCTAATTGGTACACTTATAATGCTTATTGGTGGCTTTATGGGTGAA---------GCT------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGCA------------------ACTGTTGGC---TTCATAATCGGCATGGCAGGATGGATTTATATTTTGTACGAAGTC---------------TTT------GCC---GGTGAAGCTGCACAAGCTAGTGCATCA------AGT---AACTCGGAAGGAATG---AAA---TCA---GCA---TTC---AAT---GCATTA---AAATGGATTGTATCAATC---------------------------------------------------------------GGTTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQMIEFYLILAA---V-GAATA-GI------------FWR-LLIGTLIMLIGGFMGE---A------G--Y-----------I----------------------NA------TVG-FIIGMAGWIYILYEV-----F--A-GEAAQASAS--S-NSEGM-K-S-A-F-N-AL-KWIVSI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-a]_DQ203453 [IV-Proteo3-a] medHO10B9_env_samples_DQ203453 gi|77547354|gb|DQ203453| Uncultured bacterium clone medHO10B9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10B9 predicted proteorhodopsin gene, partial cds DQ203453 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTACATTGATTGGCTCCTAACCGTTCCACTTCAGATGATAGAATTCTATCTAATTCTTGCAGCAGTTGGCGCAGCAACCGCTGGAATTTTCTGGAGACTTCTAATTGGTACACTTATAATGCTTATTGGTGGCTTTATGGGTGAAGCTGGTTACATAAATGCAACTGTTGGCTTCATAATCGGCATGACAGGATGGATTTATATTTTGTACGAAGTCTTTGCCGGTGAAGCTGCACAAGCTAGTGCATCAAGTAACTCGGAAGGAATGAAATCAGCATTCAATGCATTAAAATGGATTGTATCAATCGGTTGGGCAATATACCCA RYIDWLLTVPLQMIEFYLILAAVGAATAGIFWRLLIGTLIMLIGGFMGEAGYINATVGFIIGMTGWIYILYEVFAGEAAQASASSNSEGMKSAFNALKWIVSIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATTGATTGG------------------------CTCCTAACCGTTCCACTTCAGATGATAGAATTCTATCTAATTCTTGCAGCA---------GTT---GGCGCAGCAACCGCT---GGAATT------------------------------------TTCTGGAGA---CTTCTAATTGGTACACTTATAATGCTTATTGGTGGCTTTATGGGTGAA---------GCT------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGCA------------------ACTGTTGGC---TTCATAATCGGCATGACAGGATGGATTTATATTTTGTACGAAGTC---------------TTT------GCC---GGTGAAGCTGCACAAGCTAGTGCATCA------AGT---AACTCGGAAGGAATG---AAA---TCA---GCA---TTC---AAT---GCATTA---AAATGGATTGTATCAATC---------------------------------------------------------------GGTTGG---------GCAATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQMIEFYLILAA---V-GAATA-GI------------FWR-LLIGTLIMLIGGFMGE---A------G--Y-----------I----------------------NA------TVG-FIIGMTGWIYILYEV-----F--A-GEAAQASAS--S-NSEGM-K-S-A-F-N-AL-KWIVSI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-a]_DQ203515 [IV-Proteo3-a] MedHO1202C1_env_samples_DQ203515 gi|77547478|gb|DQ203515| Uncultured bacterium clone MedHO1202C1 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202C1 predicted proteorhodopsin gene, partial cds DQ203515 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTCCTAACCGTTCCACTTCAGATGATAGAATTCTATCTAATTCTTGCAGCAGTTGGCGCAGCAACCGCTGGAATTTTCTGGAGACTTCTAATTGGTACACTTATAATGCTTATTGGTGGCTTTATGGGTGAAGCTGGTTACATAAATGCAACTGTTGGCTTCATAATCGGCATGGCAGGATGGATTTATATTTTGTACGAAGTCTTTGCCGGTGAAGCTGCACAAGCTAGTGCATCAAGTAACTCGGAAGGAATGAAATCAGCATTCAATGCATTAAAATGGATTGTATCAATCGGTTGGGCAATTTACCCA RYIDWLLTVPLQMIEFYLILAAVGAATAGIFWRLLIGTLIMLIGGFMGEAGYINATVGFIIGMAGWIYILYEVFAGEAAQASASSNSEGMKSAFNALKWIVSIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTCCTAACCGTTCCACTTCAGATGATAGAATTCTATCTAATTCTTGCAGCA---------GTT---GGCGCAGCAACCGCT---GGAATT------------------------------------TTCTGGAGA---CTTCTAATTGGTACACTTATAATGCTTATTGGTGGCTTTATGGGTGAA---------GCT------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGCA------------------ACTGTTGGC---TTCATAATCGGCATGGCAGGATGGATTTATATTTTGTACGAAGTC---------------TTT------GCC---GGTGAAGCTGCACAAGCTAGTGCATCA------AGT---AACTCGGAAGGAATG---AAA---TCA---GCA---TTC---AAT---GCATTA---AAATGGATTGTATCAATC---------------------------------------------------------------GGTTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQMIEFYLILAA---V-GAATA-GI------------FWR-LLIGTLIMLIGGFMGE---A------G--Y-----------I----------------------NA------TVG-FIIGMAGWIYILYEV-----F--A-GEAAQASAS--S-NSEGM-K-S-A-F-N-AL-KWIVSI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-a]_DQ203556 [IV-Proteo3-a] MedHO1202F8_env_samples_DQ203556 gi|77547560|gb|DQ203556| Uncultured bacterium clone MedHO1202F8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202F8 predicted proteorhodopsin gene, partial cds DQ203556 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTCCTAACCGTTCCACTTCAGATGATAGAATTCTATCTAATTCTTGCAGCAGTTGGCGCAGCAACCGCTGGAATTTTCTGGAGACTTCTAATTGGTACACTTATAATGCTTATTGGTGGCTTTATGGGTGAAGCTGGTTACATAAATGCAACTGTTGGCTTCATAATCGGCATGGCAGGATGGATTTATATTTTGTACGAAGTCTTTGCCGGTGAAGCTGCACAAGCTAGTGCATCAAGTAACTCGGAAGGAATGAAATCAGCATTCAATGCATTAAAATGGATTGTATCAATCGGTTGGGCAATTTACCCA RYIDWLLTVPLQMIEFYLILAAVGAATAGIFWRLLIGTLIMLIGGFMGEAGYINATVGFIIGMAGWIYILYEVFAGEAAQASASSNSEGMKSAFNALKWIVSIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTCCTAACCGTTCCACTTCAGATGATAGAATTCTATCTAATTCTTGCAGCA---------GTT---GGCGCAGCAACCGCT---GGAATT------------------------------------TTCTGGAGA---CTTCTAATTGGTACACTTATAATGCTTATTGGTGGCTTTATGGGTGAA---------GCT------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGCA------------------ACTGTTGGC---TTCATAATCGGCATGGCAGGATGGATTTATATTTTGTACGAAGTC---------------TTT------GCC---GGTGAAGCTGCACAAGCTAGTGCATCA------AGT---AACTCGGAAGGAATG---AAA---TCA---GCA---TTC---AAT---GCATTA---AAATGGATTGTATCAATC---------------------------------------------------------------GGTTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQMIEFYLILAA---V-GAATA-GI------------FWR-LLIGTLIMLIGGFMGE---A------G--Y-----------I----------------------NA------TVG-FIIGMAGWIYILYEV-----F--A-GEAAQASAS--S-NSEGM-K-S-A-F-N-AL-KWIVSI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-a]_DQ203468 [IV-Proteo3-a] medHO10E7_env_samples_DQ203468 gi|77547384|gb|DQ203468| Uncultured bacterium clone medHO10E7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10E7 predicted proteorhodopsin gene, partial cds DQ203468 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTCCTAACCGTTCCACTTCAGATGATAGAATTCTATCTAATTCTTGCAGCAGTTGGCGCAGCAACCGCTGGAATTTTCTGGAGACTTCTAATTGGTACACTTATAATGCTTATTGGTGGCTTTATGGGTGAAGCTGGTTACATAAATGCAACTGTTGGCTTCATAATCGGCATGGCAGGATGGATTTATATTTTGTACGAAGTCTTTGCCGGTGAAGCTGCACAAGCTAGTGCATCAAGTAACTCGGAAGGAATGAAATCAGCATTCAATGCATTAAAATGGATTGTATCAATCGGTTGGGCCATTTACCCA RYIDWLLTVPLQMIEFYLILAAVGAATAGIFWRLLIGTLIMLIGGFMGEAGYINATVGFIIGMAGWIYILYEVFAGEAAQASASSNSEGMKSAFNALKWIVSIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTCCTAACCGTTCCACTTCAGATGATAGAATTCTATCTAATTCTTGCAGCA---------GTT---GGCGCAGCAACCGCT---GGAATT------------------------------------TTCTGGAGA---CTTCTAATTGGTACACTTATAATGCTTATTGGTGGCTTTATGGGTGAA---------GCT------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGCA------------------ACTGTTGGC---TTCATAATCGGCATGGCAGGATGGATTTATATTTTGTACGAAGTC---------------TTT------GCC---GGTGAAGCTGCACAAGCTAGTGCATCA------AGT---AACTCGGAAGGAATG---AAA---TCA---GCA---TTC---AAT---GCATTA---AAATGGATTGTATCAATC---------------------------------------------------------------GGTTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQMIEFYLILAA---V-GAATA-GI------------FWR-LLIGTLIMLIGGFMGE---A------G--Y-----------I----------------------NA------TVG-FIIGMAGWIYILYEV-----F--A-GEAAQASAS--S-NSEGM-K-S-A-F-N-AL-KWIVSI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-a]_DQ203617 [IV-Proteo3-a] medHO120D5_env_samples_DQ203617 gi|77547682|gb|DQ203617| Uncultured bacterium clone medHO120D5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120D5 predicted proteorhodopsin gene, partial cds DQ203617 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTCCTAACCGTTCCACTTCAGATGATAGAATTCTATCTAATTCTTGCAGCAGTTGGCGCAGCAACCGCTGGAATTTTCTGGAGACTTCTAATTGGTACACTTATAATGCTTATTGGTGGCTTTATGGGTGAAGCTGGTTACATAAATGCAACTGTTGGCTTCATAATCGGCATGGCAGGATGGATTTACATTTTGTACGAAGTCTTTGCCGGTGAAGCTGCACAAGCTAGTGCATCAAGTAACTCGGAAGGAATGAAGTCAGCATTCAATGCATTAAAATGGATTGTATCAATCGGTTGGGCCATTTATCCA RYIDWLLTVPLQMIEFYLILAAVGAATAGIFWRLLIGTLIMLIGGFMGEAGYINATVGFIIGMAGWIYILYEVFAGEAAQASASSNSEGMKSAFNALKWIVSIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTCCTAACCGTTCCACTTCAGATGATAGAATTCTATCTAATTCTTGCAGCA---------GTT---GGCGCAGCAACCGCT---GGAATT------------------------------------TTCTGGAGA---CTTCTAATTGGTACACTTATAATGCTTATTGGTGGCTTTATGGGTGAA---------GCT------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGCA------------------ACTGTTGGC---TTCATAATCGGCATGGCAGGATGGATTTACATTTTGTACGAAGTC---------------TTT------GCC---GGTGAAGCTGCACAAGCTAGTGCATCA------AGT---AACTCGGAAGGAATG---AAG---TCA---GCA---TTC---AAT---GCATTA---AAATGGATTGTATCAATC---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQMIEFYLILAA---V-GAATA-GI------------FWR-LLIGTLIMLIGGFMGE---A------G--Y-----------I----------------------NA------TVG-FIIGMAGWIYILYEV-----F--A-GEAAQASAS--S-NSEGM-K-S-A-F-N-AL-KWIVSI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-a]_DQ203460 [IV-Proteo3-a] medHO10D3_env_samples_DQ203460 gi|77547368|gb|DQ203460| Uncultured bacterium clone medHO10D3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10D3 predicted proteorhodopsin gene, partial cds DQ203460 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTCCTAACCGTTCCACTTCAGATGATAGAATTCTATCTAATTCTTGCAGCAGTTGGCGCAGCAACCGCTGGAATTTTCTGGAGACTTCTAATTGGTACACTTATAATGCTTATTGGTGGCTTTATGGGTGAAGCTGGTTACATAAATGCAACTGTTGGCTTCATAATCGGCATGGCAGGATGGATTTATATTTTGTACGAAGTCTTTGCCGGTGAAGCTGCACAAGCTAGTGCATCAAGTAACTCGGAAGGAATGAAATCAGCATTCAATGCATTAAAATGGATTGTATCAATCGGTTGGGCCATTTATCCA RYIDWLLTVPLQMIEFYLILAAVGAATAGIFWRLLIGTLIMLIGGFMGEAGYINATVGFIIGMAGWIYILYEVFAGEAAQASASSNSEGMKSAFNALKWIVSIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTCCTAACCGTTCCACTTCAGATGATAGAATTCTATCTAATTCTTGCAGCA---------GTT---GGCGCAGCAACCGCT---GGAATT------------------------------------TTCTGGAGA---CTTCTAATTGGTACACTTATAATGCTTATTGGTGGCTTTATGGGTGAA---------GCT------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGCA------------------ACTGTTGGC---TTCATAATCGGCATGGCAGGATGGATTTATATTTTGTACGAAGTC---------------TTT------GCC---GGTGAAGCTGCACAAGCTAGTGCATCA------AGT---AACTCGGAAGGAATG---AAA---TCA---GCA---TTC---AAT---GCATTA---AAATGGATTGTATCAATC---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQMIEFYLILAA---V-GAATA-GI------------FWR-LLIGTLIMLIGGFMGE---A------G--Y-----------I----------------------NA------TVG-FIIGMAGWIYILYEV-----F--A-GEAAQASAS--S-NSEGM-K-S-A-F-N-AL-KWIVSI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-a]_DQ203469 [IV-Proteo3-a] medHO10E9_env_samples_DQ203469 gi|77547386|gb|DQ203469| Uncultured bacterium clone medHO10E9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10E9 predicted proteorhodopsin gene, partial cds DQ203469 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGATTGGCTCCTAACCGTTCCACTTCAGATGATAGAATTCTATCTAATTCTTGCAGCAGTTGGCGCAGCAACCGCTGGAATTTTCTGGAGACTTCTAATTGGTACACTTATAATGCTTATTGGTGGCTTTATGGGTGAAGCTGGTTACATAAATGCAACTGTTGGCTTCATAATCGGCATGGCAGGATGGATTTATATTTTGTACGAAGTCTTTGCCGGTGAAGCTGCACAAGCTAGTGCATCAAGTAACTCGGAAGGAATGAAATCAGCATTCAATGCATTAAAATGGATTGTATCAATCGGTTGGGCCATATATACA SYIDWLLTVPLQMIEFYLILAAVGAATAGIFWRLLIGTLIMLIGGFMGEAGYINATVGFIIGMAGWIYILYEVFAGEAAQASASSNSEGMKSAFNALKWIVSIGWAIYT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGATTGG------------------------CTCCTAACCGTTCCACTTCAGATGATAGAATTCTATCTAATTCTTGCAGCA---------GTT---GGCGCAGCAACCGCT---GGAATT------------------------------------TTCTGGAGA---CTTCTAATTGGTACACTTATAATGCTTATTGGTGGCTTTATGGGTGAA---------GCT------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGCA------------------ACTGTTGGC---TTCATAATCGGCATGGCAGGATGGATTTATATTTTGTACGAAGTC---------------TTT------GCC---GGTGAAGCTGCACAAGCTAGTGCATCA------AGT---AACTCGGAAGGAATG---AAA---TCA---GCA---TTC---AAT---GCATTA---AAATGGATTGTATCAATC---------------------------------------------------------------GGTTGG---------GCCATATATACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LLTVPLQMIEFYLILAA---V-GAATA-GI------------FWR-LLIGTLIMLIGGFMGE---A------G--Y-----------I----------------------NA------TVG-FIIGMAGWIYILYEV-----F--A-GEAAQASAS--S-NSEGM-K-S-A-F-N-AL-KWIVSI---------------------GW---AIYT-------------------------------------------------------------------------------------------------- [IV-Proteo3-a]_DQ203474 [IV-Proteo3-a] medHO10F2_env_samples_DQ203474 gi|77547396|gb|DQ203474| Uncultured bacterium clone medHO10F2 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10F2 predicted proteorhodopsin gene, partial cds DQ203474 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGATTGGCTCCTAACCGTTCCACTTCAGATGATAGAATTCTATCTAATTCTTGCAGCAGTTGGCGCAGCAACCGCTGGAATTTTCTGGAGACTTCTAATTGGTACACTTATAATGCTTATTGGTGGCTTTATGGGTGAAGCTGGTTACATAAATGCAACTGTTGGCTTCATAATCGGCATGGCAGGATGGATTTATATTTTGTACGAAGTCTTTGCCGGTGAAGCTGCACAAGCTAGTGCATCAAGTAACTCGGAAGGAATGAAATCAGCATTCAATGCATTAAAATGGATTGTATCAATCGGTTGGGCCATATATCCA SYIDWLLTVPLQMIEFYLILAAVGAATAGIFWRLLIGTLIMLIGGFMGEAGYINATVGFIIGMAGWIYILYEVFAGEAAQASASSNSEGMKSAFNALKWIVSIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGATTGG------------------------CTCCTAACCGTTCCACTTCAGATGATAGAATTCTATCTAATTCTTGCAGCA---------GTT---GGCGCAGCAACCGCT---GGAATT------------------------------------TTCTGGAGA---CTTCTAATTGGTACACTTATAATGCTTATTGGTGGCTTTATGGGTGAA---------GCT------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGCA------------------ACTGTTGGC---TTCATAATCGGCATGGCAGGATGGATTTATATTTTGTACGAAGTC---------------TTT------GCC---GGTGAAGCTGCACAAGCTAGTGCATCA------AGT---AACTCGGAAGGAATG---AAA---TCA---GCA---TTC---AAT---GCATTA---AAATGGATTGTATCAATC---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LLTVPLQMIEFYLILAA---V-GAATA-GI------------FWR-LLIGTLIMLIGGFMGE---A------G--Y-----------I----------------------NA------TVG-FIIGMAGWIYILYEV-----F--A-GEAAQASAS--S-NSEGM-K-S-A-F-N-AL-KWIVSI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-a]_DQ339190 [IV-Proteo3-a] clone_S-SOM-C8_DQ339190 gi|85681357|gb|DQ339190| Uncultured bacterium clone S-SOM-C8 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-C8 predicted proteorhodopsin gene, partial cds. DQ339190 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGCTACATTGACTGGCTCCTAACCGTTCCACTTCAGATGATAGAATTCTATCTAATTCTTGCAGCAGTTGGCGCAGCAACCGCTGGAATTTTCTGGAGACTTCTAATTGGTACACTTATAATGCTTATTGGTGGCTTTATGGGTGAAGCTGGTTACATAAATGCAACTGTTGGCTTCATAATCGGCATGGCAGGATGGATTTATATTTTGTACGAAGTCTTTGCCGGTGAAGCTGCACAAGCTAGTGCATCAAGTAACTCGGAAGGAATGAAATCAGCATTCAATGCATTAAAATGGATTGTATCAATCGGGTGGGCCATATATCCA SYIDWLLTVPLQMIEFYLILAAVGAATAGIFWRLLIGTLIMLIGGFMGEAGYINATVGFIIGMAGWIYILYEVFAGEAAQASASSNSEGMKSAFNALKWIVSIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGACTGG------------------------CTCCTAACCGTTCCACTTCAGATGATAGAATTCTATCTAATTCTTGCAGCA---------GTT---GGCGCAGCAACCGCT---GGAATT------------------------------------TTCTGGAGA---CTTCTAATTGGTACACTTATAATGCTTATTGGTGGCTTTATGGGTGAA---------GCT------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGCA------------------ACTGTTGGC---TTCATAATCGGCATGGCAGGATGGATTTATATTTTGTACGAAGTC---------------TTT------GCC---GGTGAAGCTGCACAAGCTAGTGCATCA------AGT---AACTCGGAAGGAATG---AAA---TCA---GCA---TTC---AAT---GCATTA---AAATGGATTGTATCAATC---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LLTVPLQMIEFYLILAA---V-GAATA-GI------------FWR-LLIGTLIMLIGGFMGE---A------G--Y-----------I----------------------NA------TVG-FIIGMAGWIYILYEV-----F--A-GEAAQASAS--S-NSEGM-K-S-A-F-N-AL-KWIVSI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-a]_DQ203383 [IV-Proteo3-a] MedHO102D7_env_samples_DQ203383 gi|77547214|gb|DQ203383| Uncultured bacterium clone MedHO102D7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102D7 predicted proteorhodopsin gene, partial cds DQ203383 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGATTGGCTCCTAACCGTTCCACTTCAGATGATAGAATTCTATCTAATTCTTGCAGCAGTTGGCGCAGCAACCGCTGGAATTTTCTGGAGACTTCTAATTGGTACACTTATAATGCTTATTGGTGGCTTTATGGGTGAAGCTGGTTACATAAATGCAACTGTTGGCTTCATAATCGGCATGGCAGGATGGATTTATATTTTGTACGAAGTCTTTGCCGGTGAAGCTGCACAAGCTAGTGCATCAAGTAACTCGGAAGGAATGAAATCAGCATTCAATGCATTAAAATGGATTGTATCAATCGGTTGGGCCATTTATCCA SYIDWLLTVPLQMIEFYLILAAVGAATAGIFWRLLIGTLIMLIGGFMGEAGYINATVGFIIGMAGWIYILYEVFAGEAAQASASSNSEGMKSAFNALKWIVSIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGATTGG------------------------CTCCTAACCGTTCCACTTCAGATGATAGAATTCTATCTAATTCTTGCAGCA---------GTT---GGCGCAGCAACCGCT---GGAATT------------------------------------TTCTGGAGA---CTTCTAATTGGTACACTTATAATGCTTATTGGTGGCTTTATGGGTGAA---------GCT------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGCA------------------ACTGTTGGC---TTCATAATCGGCATGGCAGGATGGATTTATATTTTGTACGAAGTC---------------TTT------GCC---GGTGAAGCTGCACAAGCTAGTGCATCA------AGT---AACTCGGAAGGAATG---AAA---TCA---GCA---TTC---AAT---GCATTA---AAATGGATTGTATCAATC---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LLTVPLQMIEFYLILAA---V-GAATA-GI------------FWR-LLIGTLIMLIGGFMGE---A------G--Y-----------I----------------------NA------TVG-FIIGMAGWIYILYEV-----F--A-GEAAQASAS--S-NSEGM-K-S-A-F-N-AL-KWIVSI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-a]_DQ203476 [IV-Proteo3-a] medHO10F7_env_samples_DQ203476 gi|77547400|gb|DQ203476| Uncultured bacterium clone medHO10F7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10F7 predicted proteorhodopsin gene, partial cds DQ203476 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGATTGGCTCCTAACCGTTCCACTTCAGATGATAGAATTCTATCTAATTCTTGCAGCAGTTGGCGCAGCAACCGCTGGAATTTTCTGGAGACTTCTAATTGGTACACTTATAATGCTTATTGGTGGCTTTATGGGTGAAGCTGGTTACATAAATGCAACTGTTGGCTTCATAATCGGCATGGCAGGATGGATTTATATTTTGTACGAAGTCTTTGCCGGTGAAGCTGCACAAGCTAGTGCATCAAGTAACTCGGAAGGAATGAAATCAGCATTCAATGCATTAAAATGGATTGTATCAATCGGTTGGGCCATCTATCCA SYIDWLLTVPLQMIEFYLILAAVGAATAGIFWRLLIGTLIMLIGGFMGEAGYINATVGFIIGMAGWIYILYEVFAGEAAQASASSNSEGMKSAFNALKWIVSIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGATTGG------------------------CTCCTAACCGTTCCACTTCAGATGATAGAATTCTATCTAATTCTTGCAGCA---------GTT---GGCGCAGCAACCGCT---GGAATT------------------------------------TTCTGGAGA---CTTCTAATTGGTACACTTATAATGCTTATTGGTGGCTTTATGGGTGAA---------GCT------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGCA------------------ACTGTTGGC---TTCATAATCGGCATGGCAGGATGGATTTATATTTTGTACGAAGTC---------------TTT------GCC---GGTGAAGCTGCACAAGCTAGTGCATCA------AGT---AACTCGGAAGGAATG---AAA---TCA---GCA---TTC---AAT---GCATTA---AAATGGATTGTATCAATC---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LLTVPLQMIEFYLILAA---V-GAATA-GI------------FWR-LLIGTLIMLIGGFMGE---A------G--Y-----------I----------------------NA------TVG-FIIGMAGWIYILYEV-----F--A-GEAAQASAS--S-NSEGM-K-S-A-F-N-AL-KWIVSI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-a]_DQ203466 [IV-Proteo3-a] medHO10E3_env_samples_DQ203466 gi|77547380|gb|DQ203466| Uncultured bacterium clone medHO10E3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10E3 predicted proteorhodopsin gene, partial cds DQ203466 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATAGATTGGCTCCTAACCGTTCCACTTCAGATGATAGAATTCTATCTAATTCTTGCAGCAGTTGGCGCAGCAACCGCTGGAAGTTTCTGGAGACTTCTAATTGGTACACTTATAATGCTTATTGGTGGCTTTATGGGTGAAGCTGGTTACATAAATGCAACTGTTGGCTTCATAATCGGCATGGCAGGATGGATTTATATTTTGTACGAAGTCTTTGCCGGTGAAGCTGCACAAGCTAGTGCATCAAGTAACTCGGAAGGAATGAAATCAGCATTCAATGCATTAAAATGGATTGTATCAATCGGTTGGGCAATTTATCCA SYIDWLLTVPLQMIEFYLILAAVGAATAGSFWRLLIGTLIMLIGGFMGEAGYINATVGFIIGMAGWIYILYEVFAGEAAQASASSNSEGMKSAFNALKWIVSIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATAGATTGG------------------------CTCCTAACCGTTCCACTTCAGATGATAGAATTCTATCTAATTCTTGCAGCA---------GTT---GGCGCAGCAACCGCT---GGAAGT------------------------------------TTCTGGAGA---CTTCTAATTGGTACACTTATAATGCTTATTGGTGGCTTTATGGGTGAA---------GCT------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGCA------------------ACTGTTGGC---TTCATAATCGGCATGGCAGGATGGATTTATATTTTGTACGAAGTC---------------TTT------GCC---GGTGAAGCTGCACAAGCTAGTGCATCA------AGT---AACTCGGAAGGAATG---AAA---TCA---GCA---TTC---AAT---GCATTA---AAATGGATTGTATCAATC---------------------------------------------------------------GGTTGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LLTVPLQMIEFYLILAA---V-GAATA-GS------------FWR-LLIGTLIMLIGGFMGE---A------G--Y-----------I----------------------NA------TVG-FIIGMAGWIYILYEV-----F--A-GEAAQASAS--S-NSEGM-K-S-A-F-N-AL-KWIVSI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-a]_DQ203347 [IV-Proteo3-a] MedHO102A4_env_samples_DQ203347 gi|77547142|gb|DQ203347| Uncultured bacterium clone MedHO102A4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102A4 predicted proteorhodopsin gene, partial cds DQ203347 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTCCTAACCGTTCCACTTCAGATGATAGAATTCTATCTAATTCTTGCAGCAGTTGGCGCAGCAACCGCTGGAATTTTCTGGAGACTTCTAATTGGTACACTTATAATGCTTATTGGTGGCTTTATGGGTGAAGCTGGTTACATAAATGCAACTGTTGGCTTCATAATCGGCATGGCAGGATGGATTTATATTTTGTACGAAGTCTTTGCCGGTGAAGCTGCACAAGCTAGTGCATCAAGTAACTCGGAAGGAATGAAATCAGCATTCAATGCATTAAAATGGATTGTATCAATCGGGTGGGCCATTTATCCA RYIDWLLTVPLQMIEFYLILAAVGAATAGIFWRLLIGTLIMLIGGFMGEAGYINATVGFIIGMAGWIYILYEVFAGEAAQASASSNSEGMKSAFNALKWIVSIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTCCTAACCGTTCCACTTCAGATGATAGAATTCTATCTAATTCTTGCAGCA---------GTT---GGCGCAGCAACCGCT---GGAATT------------------------------------TTCTGGAGA---CTTCTAATTGGTACACTTATAATGCTTATTGGTGGCTTTATGGGTGAA---------GCT------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGCA------------------ACTGTTGGC---TTCATAATCGGCATGGCAGGATGGATTTATATTTTGTACGAAGTC---------------TTT------GCC---GGTGAAGCTGCACAAGCTAGTGCATCA------AGT---AACTCGGAAGGAATG---AAA---TCA---GCA---TTC---AAT---GCATTA---AAATGGATTGTATCAATC---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQMIEFYLILAA---V-GAATA-GI------------FWR-LLIGTLIMLIGGFMGE---A------G--Y-----------I----------------------NA------TVG-FIIGMAGWIYILYEV-----F--A-GEAAQASAS--S-NSEGM-K-S-A-F-N-AL-KWIVSI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-a]_DQ203656 [IV-Proteo3-a] medHO120H7_env_samples_DQ203656 gi|77547760|gb|DQ203656| Uncultured bacterium clone medHO120H7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120H7 predicted proteorhodopsin gene, partial cds DQ203656 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTACATTGATTGGCTCCTAACCGTTCCACTTCAGATGATAGAATTCTATCTAATTCTTGCAGCTGTTGGCGCAGCAACCGCTGGAATCTTCTGGAGACTTCTAATTGGTACACTTATAATGCTTATTGGTGGCTTTATGGGTGAAGCTGGTTACATAAATGCAACTGTTGGCTTCATAATCGGCATGGCAGGATGGATTTATATTTTATATGAAGTCTTTGCCGGTGAAGCTGCACAAGCTAGTGCATCAAGTAACTCGGAAGGAATGAAATCAGCATTCAATGCATTAAAATGGATTGTATCAATCGGTTGGGCCATCTATCCA RYIDWLLTVPLQMIEFYLILAAVGAATAGIFWRLLIGTLIMLIGGFMGEAGYINATVGFIIGMAGWIYILYEVFAGEAAQASASSNSEGMKSAFNALKWIVSIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATTGATTGG------------------------CTCCTAACCGTTCCACTTCAGATGATAGAATTCTATCTAATTCTTGCAGCT---------GTT---GGCGCAGCAACCGCT---GGAATC------------------------------------TTCTGGAGA---CTTCTAATTGGTACACTTATAATGCTTATTGGTGGCTTTATGGGTGAA---------GCT------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGCA------------------ACTGTTGGC---TTCATAATCGGCATGGCAGGATGGATTTATATTTTATATGAAGTC---------------TTT------GCC---GGTGAAGCTGCACAAGCTAGTGCATCA------AGT---AACTCGGAAGGAATG---AAA---TCA---GCA---TTC---AAT---GCATTA---AAATGGATTGTATCAATC---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQMIEFYLILAA---V-GAATA-GI------------FWR-LLIGTLIMLIGGFMGE---A------G--Y-----------I----------------------NA------TVG-FIIGMAGWIYILYEV-----F--A-GEAAQASAS--S-NSEGM-K-S-A-F-N-AL-KWIVSI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-a]_DQ203529 [IV-Proteo3-a] MedHO1202D12_env_samples_DQ203529 gi|77547506|gb|DQ203529| Uncultured bacterium clone MedHO1202D12 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202D12 predicted proteorhodopsin gene, partial cds DQ203529 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGTTACATTGATTGGCTCCTAACCGTTCCACTTCAGATGATAGAATTCTATCTAATTCTTGCAGCTGTTGGCGCAGCAACCGCTGGAATCTTCTGGAGACTTCTAATTGGTACACTTATAATGCTTATTGGTGGCTTTATGGGTGAAGCTGGTTACATAAATGCAACTGTTGGCTTCATAATCGGAATGGCAGGATGGATTTATATTTTATATGAAGTCTTTGCCGGTGAAGCTGCACAAGCTAGTGCATCAAGTAACTCGGAAGGAATGAAATCAGCATTCAATGCATTAAAATGGATTGTATCAATCGGTTGGGCCATTTACCCA SYIDWLLTVPLQMIEFYLILAAVGAATAGIFWRLLIGTLIMLIGGFMGEAGYINATVGFIIGMAGWIYILYEVFAGEAAQASASSNSEGMKSAFNALKWIVSIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTTACATTGATTGG------------------------CTCCTAACCGTTCCACTTCAGATGATAGAATTCTATCTAATTCTTGCAGCT---------GTT---GGCGCAGCAACCGCT---GGAATC------------------------------------TTCTGGAGA---CTTCTAATTGGTACACTTATAATGCTTATTGGTGGCTTTATGGGTGAA---------GCT------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGCA------------------ACTGTTGGC---TTCATAATCGGAATGGCAGGATGGATTTATATTTTATATGAAGTC---------------TTT------GCC---GGTGAAGCTGCACAAGCTAGTGCATCA------AGT---AACTCGGAAGGAATG---AAA---TCA---GCA---TTC---AAT---GCATTA---AAATGGATTGTATCAATC---------------------------------------------------------------GGTTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LLTVPLQMIEFYLILAA---V-GAATA-GI------------FWR-LLIGTLIMLIGGFMGE---A------G--Y-----------I----------------------NA------TVG-FIIGMAGWIYILYEV-----F--A-GEAAQASAS--S-NSEGM-K-S-A-F-N-AL-KWIVSI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-a]_DQ203403 [IV-Proteo3-a] MedHO102F4_env_samples_DQ203403 gi|77547254|gb|DQ203403| Uncultured bacterium clone MedHO102F4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102F4 predicted proteorhodopsin gene, partial cds DQ203403 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTACATTGATTGGCTCCTAACTGTTCCACTTCAGATGATAGAATTTTATTTAATTCTTGCAGCTGTTGGAGCGGCAACCGCTGGAATATTCTGGAGGCTTCTAATTGGTACACTCATAATGCTAATTGGTGGTTTTATGGGCGAAGCTGGTTACATTAATGCAACTGTTGGCTTTATAGTCGGAATGGCAGGATGGATTTACATTTTATATGAAGTCTTTGCTGGTGAAGCTGCACAAGCTAGTGCATCAAGTAACTCGGAAGGTATGAAATCAGCATTCAATGCATTAAAATGGATTGTTTCAATTGGGTGGGCCATTTATCCA RYIDWLLTVPLQMIEFYLILAAVGAATAGIFWRLLIGTLIMLIGGFMGEAGYINATVGFIVGMAGWIYILYEVFAGEAAQASASSNSEGMKSAFNALKWIVSIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATTGATTGG------------------------CTCCTAACTGTTCCACTTCAGATGATAGAATTTTATTTAATTCTTGCAGCT---------GTT---GGAGCGGCAACCGCT---GGAATA------------------------------------TTCTGGAGG---CTTCTAATTGGTACACTCATAATGCTAATTGGTGGTTTTATGGGCGAA---------GCT------------------GGT------TAC---------------------------------ATT------------------------------------------------------------------AATGCA------------------ACTGTTGGC---TTTATAGTCGGAATGGCAGGATGGATTTACATTTTATATGAAGTC---------------TTT------GCT---GGTGAAGCTGCACAAGCTAGTGCATCA------AGT---AACTCGGAAGGTATG---AAA---TCA---GCA---TTC---AAT---GCATTA---AAATGGATTGTTTCAATT---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQMIEFYLILAA---V-GAATA-GI------------FWR-LLIGTLIMLIGGFMGE---A------G--Y-----------I----------------------NA------TVG-FIVGMAGWIYILYEV-----F--A-GEAAQASAS--S-NSEGM-K-S-A-F-N-AL-KWIVSI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-a]_DQ203414 [IV-Proteo3-a] MedHO102G4_env_samples_DQ203414 gi|77547276|gb|DQ203414| Uncultured bacterium clone MedHO102G4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102G4 predicted proteorhodopsin gene, partial cds DQ203414 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTACATTGATTGGCTCCTAACTGTTCCACTTCAGATGATAGAATTTTATTTAATTCTTGCAGCTGTTGGAGCGGCAACCGCTGGAATATTCTGGAGGCTTCTAATTGGTACACTCATAATGCTAATTGGTGGTTTTATGGGCGAAGCTGGTTACATTAATGCAACTGTTGGCTTTATAGTCGGAATGGCAGGATGGATTTACATTTTATATGAAGTCTTTGCTGGTGAAGCTGCACAAGCTAGTGCATCAAGTAACTCGGAAGGTATGAAATCAGCATTCAATGCATTAAAATGGATTGTTTCAATTGGGTGGGCCATTTATCCA RYIDWLLTVPLQMIEFYLILAAVGAATAGIFWRLLIGTLIMLIGGFMGEAGYINATVGFIVGMAGWIYILYEVFAGEAAQASASSNSEGMKSAFNALKWIVSIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATTGATTGG------------------------CTCCTAACTGTTCCACTTCAGATGATAGAATTTTATTTAATTCTTGCAGCT---------GTT---GGAGCGGCAACCGCT---GGAATA------------------------------------TTCTGGAGG---CTTCTAATTGGTACACTCATAATGCTAATTGGTGGTTTTATGGGCGAA---------GCT------------------GGT------TAC---------------------------------ATT------------------------------------------------------------------AATGCA------------------ACTGTTGGC---TTTATAGTCGGAATGGCAGGATGGATTTACATTTTATATGAAGTC---------------TTT------GCT---GGTGAAGCTGCACAAGCTAGTGCATCA------AGT---AACTCGGAAGGTATG---AAA---TCA---GCA---TTC---AAT---GCATTA---AAATGGATTGTTTCAATT---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQMIEFYLILAA---V-GAATA-GI------------FWR-LLIGTLIMLIGGFMGE---A------G--Y-----------I----------------------NA------TVG-FIVGMAGWIYILYEV-----F--A-GEAAQASAS--S-NSEGM-K-S-A-F-N-AL-KWIVSI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-a]_DQ203467 [IV-Proteo3-a] medHO10E4_env_samples_DQ203467 gi|77547382|gb|DQ203467| Uncultured bacterium clone medHO10E4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10E4 predicted proteorhodopsin gene, partial cds DQ203467 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATACATTGATTGGCTCCTAACTGTTCCACTTCAGATGATAGAATTTTATTTAATTCTTGCAGCTGTTGGAGCGGCAACCGCTGGAATATTCTGGAGGCTTCTAATTGGTACACTCATAATGCTAATTGGTGGTTTTATGGGCGAAGCTGGTTACATTAATGCAACTGTTGGCTTTATAGTCGGAATGGCAGGATGGATTTATATTTTATATGAAGTCTTTGCTGGTGAAGCTGCACAAGCTAGTGCATCAAGTAACTCGGAAGGTATGAAATCAGCATTCAATGCATTAAAATGGATTGTTTCAATTGGGTGGGCAATTTATCCA RYIDWLLTVPLQMIEFYLILAAVGAATAGIFWRLLIGTLIMLIGGFMGEAGYINATVGFIVGMAGWIYILYEVFAGEAAQASASSNSEGMKSAFNALKWIVSIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATTGATTGG------------------------CTCCTAACTGTTCCACTTCAGATGATAGAATTTTATTTAATTCTTGCAGCT---------GTT---GGAGCGGCAACCGCT---GGAATA------------------------------------TTCTGGAGG---CTTCTAATTGGTACACTCATAATGCTAATTGGTGGTTTTATGGGCGAA---------GCT------------------GGT------TAC---------------------------------ATT------------------------------------------------------------------AATGCA------------------ACTGTTGGC---TTTATAGTCGGAATGGCAGGATGGATTTATATTTTATATGAAGTC---------------TTT------GCT---GGTGAAGCTGCACAAGCTAGTGCATCA------AGT---AACTCGGAAGGTATG---AAA---TCA---GCA---TTC---AAT---GCATTA---AAATGGATTGTTTCAATT---------------------------------------------------------------GGGTGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQMIEFYLILAA---V-GAATA-GI------------FWR-LLIGTLIMLIGGFMGE---A------G--Y-----------I----------------------NA------TVG-FIVGMAGWIYILYEV-----F--A-GEAAQASAS--S-NSEGM-K-S-A-F-N-AL-KWIVSI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-a]_DQ203394 [IV-Proteo3-a] MedHO102E6_env_samples_DQ203394 gi|77547236|gb|DQ203394| Uncultured bacterium clone MedHO102E6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102E6 predicted proteorhodopsin gene, partial cds DQ203394 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATAGATTGGCTCCTAACTGTTCCACTTCAGATGATAGAATTTTATTTAATTCTTGCAGCTGTTGGAGCGGCAACCGCTGGAATATTCTGGAGGCTTCTAATTGGTACACTCATAATGCTAATTGGTGGTTTTATGGGCGAAGCTGGTTACATTAATGCAACTGTTGGCTTTATAGTCGGAATGGCAGGATGGATTTACATTTTATATGAAGTCTTTGCTGGTGAAGCTGCACAAGCTAGTGCATCAAGTAACTCGGAAGGTATGAAATCAGCATTCAATGCATTAAAATGGATTGTTTCAATTGGGTGGGCCATTTATCCA SYIDWLLTVPLQMIEFYLILAAVGAATAGIFWRLLIGTLIMLIGGFMGEAGYINATVGFIVGMAGWIYILYEVFAGEAAQASASSNSEGMKSAFNALKWIVSIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATAGATTGG------------------------CTCCTAACTGTTCCACTTCAGATGATAGAATTTTATTTAATTCTTGCAGCT---------GTT---GGAGCGGCAACCGCT---GGAATA------------------------------------TTCTGGAGG---CTTCTAATTGGTACACTCATAATGCTAATTGGTGGTTTTATGGGCGAA---------GCT------------------GGT------TAC---------------------------------ATT------------------------------------------------------------------AATGCA------------------ACTGTTGGC---TTTATAGTCGGAATGGCAGGATGGATTTACATTTTATATGAAGTC---------------TTT------GCT---GGTGAAGCTGCACAAGCTAGTGCATCA------AGT---AACTCGGAAGGTATG---AAA---TCA---GCA---TTC---AAT---GCATTA---AAATGGATTGTTTCAATT---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LLTVPLQMIEFYLILAA---V-GAATA-GI------------FWR-LLIGTLIMLIGGFMGE---A------G--Y-----------I----------------------NA------TVG-FIVGMAGWIYILYEV-----F--A-GEAAQASAS--S-NSEGM-K-S-A-F-N-AL-KWIVSI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [IV-Proteo3-a]_DQ203691 [IV-Proteo3-a] medHO155D1_env_samples_DQ203691 gi|77547830|gb|DQ203691| Uncultured bacterium clone medHO155D1 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155D1 predicted proteorhodopsin gene, partial cds DQ203691 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTATTAACCGTTCCACTGCAAATGATAGAGTTTTATCTTATCCTAGCAGCAGTAGGTGCAGCTTCTGCAGGAATTTTCTGGAGACTACTTATCGGTACACTAATAATGCTGATTGGTGGTTTTATGGGAGAAGCTGGATACATTAATGCAACTGTCGGTTTCGTAATTGGAATGGCAGGATGGATTTACATTCTATATGAAGTATTTGCTGGTGAAGCCGCACAGGCTAGTGCATCAAGTAATTCCGATGGAATGAAATCCGCTTTCAATTCTTTAAAATGGATTGTTTCAATTGGTTGGGCCATCTATCCA RYIDWLLTVPLQMIEFYLILAAVGAASAGIFWRLLIGTLIMLIGGFMGEAGYINATVGFVIGMAGWIYILYEVFAGEAAQASASSNSDGMKSAFNSLKWIVSIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTATTAACCGTTCCACTGCAAATGATAGAGTTTTATCTTATCCTAGCAGCA---------GTA---GGTGCAGCTTCTGCA---GGAATT------------------------------------TTCTGGAGA---CTACTTATCGGTACACTAATAATGCTGATTGGTGGTTTTATGGGAGAA---------GCT------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCA------------------ACTGTCGGT---TTCGTAATTGGAATGGCAGGATGGATTTACATTCTATATGAAGTA---------------TTT------GCT---GGTGAAGCCGCACAGGCTAGTGCATCA------AGT---AATTCCGATGGAATG---AAA---TCC---GCT---TTC---AAT---TCTTTA---AAATGGATTGTTTCAATT---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQMIEFYLILAA---V-GAASA-GI------------FWR-LLIGTLIMLIGGFMGE---A------G--Y-----------I----------------------NA------TVG-FVIGMAGWIYILYEV-----F--A-GEAAQASAS--S-NSDGM-K-S-A-F-N-SL-KWIVSI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648745 [III-Beta3-a] A4_Mayo2011_A4M13F_A5_MIX1_300_98_150_env_samples_JN648745 gi|356818596|gb|JN648745| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648745 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGCTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC LITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILLEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGCTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILLEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648791 [III-Beta3-a] F10_Mayo2011_F10M13F_A5_MIX1_300_98_5198_env_samples_JN648791 gi|356818688|gb|JN648791| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648791 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGCTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC LITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILLEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGCTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILLEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648794 [III-Beta3-a] G1_Mayo2011_G1M13F_A5_MIX1_300_98_5198_env_samples_JN648794 gi|356818694|gb|JN648794| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648794 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC LITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648799 [III-Beta3-a] G8_Mayo2011_G8M13F_A5_MIX1_300_98_5198_env_samples_JN648799 gi|356818704|gb|JN648799| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648799 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC LITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648722 [III-Beta3-a] 6A5_MIX1_M13F_2010_env_samples_JN648722 gi|356818550|gb|JN648722| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648722 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTCGGT ITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTFG ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC---------------------------------------------------------------GGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF---------------------G---------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648764 [III-Beta3-a] C8_Mayo2011_C7M13F_A5_MIX1_300_98_150_env_samples_JN648764 gi|356818634|gb|JN648764| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648764 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC LITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648738 [III-Beta3-a] E10_Mayo2011_E10M13F_A5_MIX1_300_98_5198_env_samples_JN648738 gi|356818582|gb|JN648738| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648738 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC LITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648737 [III-Beta3-a] E9_Mayo2011_E9M13F_A5_MIX1_300_98_5198_env_samples_JN648737 gi|356818580|gb|JN648737| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648737 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC LITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648779 [III-Beta3-a] E4_Mayo2011_E4M13F_A5_MIX1_300_98_5198_env_samples_JN648779 gi|356818664|gb|JN648779| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648779 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC LITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648802 [III-Beta3-a] G12_Mayo2011_G12M13F_A5_MIX1_300_98_5198_env_samples_JN648802 gi|356818710|gb|JN648802| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648802 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTCCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC LITVPLLMVEFYLILSAIAKVPAGVSWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TCCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILSA---I-AKVPA-GV------------SWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648804 [III-Beta3-a] H2_Mayo2011_H2M13F_A5_MIX1_300_98_5198_env_samples_JN648804 gi|356818714|gb|JN648804| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648804 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTCCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC LITVPLLMVEFYLILSAIAKVPAGVSWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TCCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILSA---I-AKVPA-GV------------SWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648758 [III-Beta3-a] B11_Mayo2011_B10M13F_A5_MIX1_300_98_150_env_samples_JN648758 gi|356818622|gb|JN648758| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648758 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC LITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648746 [III-Beta3-a] A5_Mayo2011_A5M13F_A5_MIX1_300_98_150_env_samples_JN648746 gi|356818598|gb|JN648746| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648746 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC LITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648777 [III-Beta3-a] E2_Mayo2011_E2M13F_A5_MIX1_300_98_5198_env_samples_JN648777 gi|356818660|gb|JN648777| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648777 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC LITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648782 [III-Beta3-a] E7_Mayo2011_E7M13F_A5_MIX1_300_98_5198_env_samples_JN648782 gi|356818670|gb|JN648782| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648782 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC LITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648800 [III-Beta3-a] G10_Mayo2011_G10M13F_A5_MIX1_300_98_5198_env_samples_JN648800 gi|356818706|gb|JN648800| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648800 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC LITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648754 [III-Beta3-a] B1_Mayo2011_B1M13F_A5_MIX1_300_98_150_env_samples_JN648754 gi|356818614|gb|JN648754| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648754 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na CTCATCACCGTGCCTCTCTTGATGGTTGAATTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC LITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACCGTGCCTCTCTTGATGGTTGAATTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648765 [III-Beta3-a] C9_Mayo2011_C8M13F_A5_MIX1_300_98_150_env_samples_JN648765 gi|356818636|gb|JN648765| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648765 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC LITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648735 [III-Beta3-a] C11_Mayo2011_C10M13F_A5_MIX1_300_98_150_env_samples_JN648735 gi|356818576|gb|JN648735| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648735 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na CTCATCCCCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC LIPVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCCCCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LIPVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648809 [III-Beta3-a] H10_Mayo2011_H10M13F_A5_MIX1_300_98_5198_env_samples_JN648809 gi|356818724|gb|JN648809| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648809 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC LITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648757 [III-Beta3-a] B9_Mayo2011_B8M13F_A5_MIX1_300_98_150_env_samples_JN648757 gi|356818620|gb|JN648757| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648757 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC LITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648808 [III-Beta3-a] H8_Mayo2011_H8M13F_A5_MIX1_300_98_5198_env_samples_JN648808 gi|356818722|gb|JN648808| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648808 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTCCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC LITVPLLMVEFYLILPAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTCCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILPA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648797 [III-Beta3-a] G6_Mayo2011_G6M13F_A5_MIX1_300_98_5198_env_samples_JN648797 gi|356818700|gb|JN648797| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648797 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC LITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648766 [III-Beta3-a] C10_Mayo2011_C9M13F_A5_MIX1_300_98_150_env_samples_JN648766 gi|356818638|gb|JN648766| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648766 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC LITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648753 [III-Beta3-a] A12_Mayo2011_A12M13F_A5_MIX1_300_98_150_env_samples_JN648753 gi|356818612|gb|JN648753| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648753 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC LITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648751 [III-Beta3-a] A_10_Mayo2011_A10M13F_A5_MIX1_300_98_150_env_samples_JN648751 gi|356818608|gb|JN648751| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648751 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC LITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648726 [III-Beta3-a] A5_MIX1_300_6__F4_Abril2011_A11M13F_env_samples_JN648726 gi|356818558|gb|JN648726| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648726 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC LITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648807 [III-Beta3-a] H7_Mayo2011_H7M13F_A5_MIX1_300_98_5198_env_samples_JN648807 gi|356818720|gb|JN648807| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648807 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC LITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648729 [III-Beta3-a] A1_Mayo2011_A1M13F_A5_MIX1_300_98_150_env_samples_JN648729 gi|356818564|gb|JN648729| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648729 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC LITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648806 [III-Beta3-a] H4_Mayo2011_H4M13F_A5_MIX1_300_98_5198_env_samples_JN648806 gi|356818718|gb|JN648806| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648806 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC LITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648795 [III-Beta3-a] G2_Mayo2011_G2M13F_A5_MIX1_300_98_5198_env_samples_JN648795 gi|356818696|gb|JN648795| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648795 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC LITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648762 [III-Beta3-a] C5_Mayo2011_C4M13F_A5_MIX1_300_98_150_env_samples_JN648762 gi|356818630|gb|JN648762| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648762 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC LITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648772 [III-Beta3-a] D9_Mayo2011_D8M13F_A5_MIX1_300_98_150_env_samples_JN648772 gi|356818650|gb|JN648772| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648772 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC LITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648768 [III-Beta3-a] D1_Mayo2011_C12M13F_A5_MIX1_300_98_150_env_samples_JN648768 gi|356818642|gb|JN648768| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648768 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC LITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648803 [III-Beta3-a] H1_Mayo2011_H1M13F_A5_MIX1_300_98_5198_env_samples_JN648803 gi|356818712|gb|JN648803| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648803 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC LITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648771 [III-Beta3-a] D8_Mayo2011_D7M13F_A5_MIX1_300_98_150_env_samples_JN648771 gi|356818648|gb|JN648771| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648771 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC ITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648739 [III-Beta3-a] E11_Mayo2011_E11M13F_A5_MIX1_300_98_5198_env_samples_JN648739 gi|356818584|gb|JN648739| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648739 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGAAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC ITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLEEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGAAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLEE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648801 [III-Beta3-a] G11_Mayo2011_G11M13F_A5_MIX1_300_98_5198_env_samples_JN648801 gi|356818708|gb|JN648801| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648801 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC ITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648789 [III-Beta3-a] F8_Mayo2011_F8M13F_A5_MIX1_300_98_5198_env_samples_JN648789 gi|356818684|gb|JN648789| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648789 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC ITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648749 [III-Beta3-a] A8_Mayo2011_A8M13F_A5_MIX1_300_98_150_env_samples_JN648749 gi|356818604|gb|JN648749| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648749 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC ITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648748 [III-Beta3-a] A7_Mayo2011_A7M13F_A5_MIX1_300_98_150_env_samples_JN648748 gi|356818602|gb|JN648748| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648748 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC ITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648756 [III-Beta3-a] B8_Mayo2011_B7M13F_A5_MIX1_300_98_150_env_samples_JN648756 gi|356818618|gb|JN648756| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648756 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC ITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648763 [III-Beta3-a] C7_Mayo2011_C6M13F_A5_MIX1_300_98_150_env_samples_JN648763 gi|356818632|gb|JN648763| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648763 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGACCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC ITVPLLMVEFYLTLSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGACCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLTLSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648770 [III-Beta3-a] D5_Mayo2011_D4M13F_A5_MIX1_300_98_150_env_samples_JN648770 gi|356818646|gb|JN648770| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648770 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC ITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648787 [III-Beta3-a] F5_Mayo2011_F5M13F_A5_MIX1_300_98_5198_env_samples_JN648787 gi|356818680|gb|JN648787| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648787 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC ITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648773 [III-Beta3-a] D10_Mayo2011_D9M13F_A5_MIX1_300_98_150_env_samples_JN648773 gi|356818652|gb|JN648773| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648773 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC ITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648752 [III-Beta3-a] A11_Mayo2011_A11M13F_A5_MIX1_300_98_150_env_samples_JN648752 gi|356818610|gb|JN648752| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648752 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC ITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648788 [III-Beta3-a] F6_Mayo2011_F6M13F_A5_MIX1_300_98_5198_env_samples_JN648788 gi|356818682|gb|JN648788| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648788 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC ITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648769 [III-Beta3-a] D3_Mayo2011_D2M13F_A5_MIX1_300_98_150_env_samples_JN648769 gi|356818644|gb|JN648769| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648769 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGATGATGCGCTGGATCGTCACCTTC ITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKMMRWIVTF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---ATGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-MM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648760 [III-Beta3-a] C1_Mayo2011_B12M13F_A5_MIX1_300_98_150_env_samples_JN648760 gi|356818626|gb|JN648760| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648760 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC ITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648759 [III-Beta3-a] B12_Mayo2011_B11M13F_A5_MIX1_300_98_150_env_samples_JN648759 gi|356818624|gb|JN648759| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648759 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGTCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTAATGCGCTGGATCGTCACCTTC ITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMSAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGTCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTAATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MSA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648780 [III-Beta3-a] E5_Mayo2011_E5M13F_A5_MIX1_300_98_5198_env_samples_JN648780 gi|356818666|gb|JN648780| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648780 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC ITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648805 [III-Beta3-a] H3_Mayo2011_H3M13F_A5_MIX1_300_98_5198_env_samples_JN648805 gi|356818716|gb|JN648805| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648805 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC ITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648792 [III-Beta3-a] F11_Mayo2011_F11M13F_A5_MIX1_300_98_5198_env_samples_JN648792 gi|356818690|gb|JN648792| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648792 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC ITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648767 [III-Beta3-a] C12_Mayo2011_C11M13F_A5_MIX1_300_98_150_env_samples_JN648767 gi|356818640|gb|JN648767| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648767 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC ITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648790 [III-Beta3-a] F9_Mayo2011_F9M13F_A5_MIX1_300_98_5198_env_samples_JN648790 gi|356818686|gb|JN648790| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648790 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC ITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648743 [III-Beta3-a] H11_Mayo2011_H11M13F_A5_MIX1_300_98_5198_env_samples_JN648743 gi|356818592|gb|JN648743| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648743 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC ITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648786 [III-Beta3-a] F4_Mayo2011_F4M13F_A5_MIX1_300_98_5198_env_samples_JN648786 gi|356818678|gb|JN648786| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648786 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC ITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648776 [III-Beta3-a] E2_Mayo2011_D12M13F_A5_MIX1_300_98_150_env_samples_JN648776 gi|356818658|gb|JN648776| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648776 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC ITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648793 [III-Beta3-a] F12_Mayo2011_F12M13F_A5_MIX1_300_98_5198_env_samples_JN648793 gi|356818692|gb|JN648793| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648793 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; G108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATCACCGTGCCTCTCTTGATGGTTGGGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC ITVPLLMVGFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCTCTCTTGATGGTTGGGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVGFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648750 [III-Beta3-a] A9_Mayo2011_A9M13F_A5_MIX1_300_98_150_env_samples_JN648750 gi|356818606|gb|JN648750| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648750 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC ITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648774 [III-Beta3-a] D12_Mayo2011_D10M13F_A5_MIX1_300_98_150_env_samples_JN648774 gi|356818654|gb|JN648774| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648774 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC ITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648798 [III-Beta3-a] G7_Mayo2011_G7M13F_A5_MIX1_300_98_5198_env_samples_JN648798 gi|356818702|gb|JN648798| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648798 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC ITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648775 [III-Beta3-a] E1_Mayo2011_D11M13F_A5_MIX1_300_98_150_env_samples_JN648775 gi|356818656|gb|JN648775| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648775 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC ITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648720 [III-Beta3-a] 3_A5_MIX1_M13F_2010_env_samples_JN648720 gi|356818546|gb|JN648720| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648720 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCTGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATC LITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCTGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWI----------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648730 [III-Beta3-a] A2_Mayo2011_A2M13F_A5_MIX1_300_98_150_env_samples_JN648730 gi|356818566|gb|JN648730| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648730 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCAGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTCGGG ITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTFG ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCAGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC---------------------------------------------------------------GGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF---------------------G---------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648747 [III-Beta3-a] A6_Mayo2011_A6M13F_A5_MIX1_300_98_150_env_samples_JN648747 gi|356818600|gb|JN648747| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648747 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCAGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC ITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCAGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648784 [III-Beta3-a] F2_Mayo2011_F2M13F_A5_MIX1_300_98_5198_env_samples_JN648784 gi|356818674|gb|JN648784| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648784 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCAGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC ITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCAGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648796 [III-Beta3-a] G5_Mayo2011_G5M13F_A5_MIX1_300_98_5198_env_samples_JN648796 gi|356818698|gb|JN648796| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648796 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCAGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC ITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCAGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648783 [III-Beta3-a] F1_Mayo2011_F1M13F_A5_MIX1_300_98_5198_env_samples_JN648783 gi|356818672|gb|JN648783| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648783 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCAGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCAGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC ITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLSWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCAGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCAGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLSWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648781 [III-Beta3-a] E6_Mayo2011_E6M13F_A5_MIX1_300_98_5198_env_samples_JN648781 gi|356818668|gb|JN648781| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648781 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCAGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC ITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCAGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648778 [III-Beta3-a] E3_Mayo2011_E3M13F_A5_MIX1_300_98_5198_env_samples_JN648778 gi|356818662|gb|JN648778| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648778 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCAGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC ITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCAGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JN648785 [III-Beta3-a] F3_Mayo2011_F3M13F_A5_MIX1_300_98_5198_env_samples_JN648785 gi|356818676|gb|JN648785| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648785 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCCATCGCAAAAGTTCCAGCCGGCGTCTTCTGGCGGCTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAGGCTCACTACATGGCCGTCATGCCCGCATTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATCTTTTTTGGAGAGGCAAGCCGAATCAACGCCAACCAGGCTCCTCCATCCGTCCAGTCGGCCTTCAAGCTGATGCGCTGGATCGTCACCTTC ITVPLLMVEFYLILSAIAKVPAGVFWRLIIGTLVMLIGGYLGEAHYMAVMPAFIIGMLGWVYILFEIFFGEASRINANQAPPSVQSAFKLMRWIVTF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCTCTCTTGATGGTTGAGTTCTATCTGATCCTTTCCGCC---------ATC---GCAAAAGTTCCAGCC---GGCGTC------------------------------------TTCTGGCGG---CTCATCATCGGAACACTGGTCATGCTGATCGGTGGTTACCTCGGAGAG---------GCT------------------CAC------TAC---------------------------------ATG------------------------------------------------------------------GCCGTC------------------ATGCCCGCA---TTCATTATCGGAATGCTCGGTTGGGTCTACATCCTGTTTGAGATC---------------TTT------TTT---GGAGAGGCAAGCCGAATCAACGCCAAC------CAG---GCTCCTCCATCCGTC---CAG---TCG---GCC---TTC---AAG---CTGATG---CGCTGGATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---I-AKVPA-GV------------FWR-LIIGTLVMLIGGYLGE---A------H--Y-----------M----------------------AV------MPA-FIIGMLGWVYILFEI-----F--F-GEASRINAN--Q-APPSV-Q-S-A-F-K-LM-RWIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JX863217 [III-Beta3-a] MALINA_OTU69_453_L_env_samples_JX863217 gi|425477384|gb|JX863217| Uncultured bacterium clone MALINA OTU69 453 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU69 453 L putative proteorhodopsin gene, partial cds JX863217 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 13Aug2009 0m_depth Arctic Ocean marine 69.25 -137.2 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTCATCACCGTTCCGCTGCTGATGGTTGAGTTCTATCTCATCCTCGCCGCGATCACCAAGGTTCCCGCTGGCGTTTTCTGGCGCCTCATGATCGGCACCTTCGTCATGCTCATTGGTGGCTACGTCGGTGAAGCAGGTTATGTCGCTGCATGGCCGGCCTTCATCGTCGGTATGATTGGTTGGGCTTACATCCTCTATGAGGTGTTTGCGGGTGAGGCGAGCAAGATCAATGCTTCGCAAGCTCCTGAGTCCGTCCAGTCTGCGTTCAAGCTGATGCGCTTGATCGTTACCTTC WLITVPLLMVEFYLILAAITKVPAGVFWRLMIGTFVMLIGGYVGEAGYVAAWPAFIVGMIGWAYILYEVFAGEASKINASQAPESVQSAFKLMRLIVTF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTCATCACCGTTCCGCTGCTGATGGTTGAGTTCTATCTCATCCTCGCCGCG---------ATC---ACCAAGGTTCCCGCT---GGCGTT------------------------------------TTCTGGCGC---CTCATGATCGGCACCTTCGTCATGCTCATTGGTGGCTACGTCGGTGAA---------GCA------------------GGT------TAT---------------------------------GTC------------------------------------------------------------------GCTGCA------------------TGGCCGGCC---TTCATCGTCGGTATGATTGGTTGGGCTTACATCCTCTATGAGGTG---------------TTT------GCG---GGTGAGGCGAGCAAGATCAATGCTTCG------CAA---GCTCCTGAGTCCGTC---CAG---TCT---GCG---TTC---AAG---CTGATG---CGCTTGATCGTTACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYLILAA---I-TKVPA-GV------------FWR-LMIGTFVMLIGGYVGE---A------G--Y-----------V----------------------AA------WPA-FIVGMIGWAYILYEV-----F--A-GEASKINAS--Q-APESV-Q-S-A-F-K-LM-RLIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JX863210 [III-Beta3-a] MALINA_OTU63_427_L_env_samples_JX863210 gi|425477370|gb|JX863210| Uncultured bacterium clone MALINA OTU63 427 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU63 427 L putative proteorhodopsin gene, partial cds JX863210 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 13Aug2009 0m_depth Arctic Ocean marine 69.25 -137.2 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGATCACGGTACCCCTCCTGATGGTTGAGTTCTACCTCATCCTCTCCGCGGTCACCAAGGTCTCGGGCGGCGTGTTTTGGCGCCTCATGATCGGTACCCTGGTCATGCTCATCGCCGGTTACCTCGGCGAAGCCGGCACCGTCGGCGCTTGGCCGGCCTTCATCGTCAGCATGGCTGGTTGGTTCTACATCATCTACGAGATCTACGCTGGTGAAGCCAGCAAGGTCAGCGCTGAGTCCGCTCCGCCTGCCGTCCAGTCTGCCTTCAAGCTGATGCGCGGCATCGTCGTCTTC WLITVPLLMVEFYLILSAVTKVSGGVFWRLMIGTLVMLIAGYLGEAGTVGAWPAFIVSMAGWFYIIYEIYAGEASKVSAESAPPAVQSAFKLMRGIVVF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATCACGGTACCCCTCCTGATGGTTGAGTTCTACCTCATCCTCTCCGCG---------GTC---ACCAAGGTCTCGGGC---GGCGTG------------------------------------TTTTGGCGC---CTCATGATCGGTACCCTGGTCATGCTCATCGCCGGTTACCTCGGCGAA---------GCC------------------GGC------ACC---------------------------------GTC------------------------------------------------------------------GGCGCT------------------TGGCCGGCC---TTCATCGTCAGCATGGCTGGTTGGTTCTACATCATCTACGAGATC---------------TAC------GCT---GGTGAAGCCAGCAAGGTCAGCGCTGAG------TCC---GCTCCGCCTGCCGTC---CAG---TCT---GCC---TTC---AAG---CTGATG---CGCGGCATCGTCGTCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYLILSA---V-TKVSG-GV------------FWR-LMIGTLVMLIAGYLGE---A------G--T-----------V----------------------GA------WPA-FIVSMAGWFYIIYEI-----Y--A-GEASKVSAE--S-APPAV-Q-S-A-F-K-LM-RGIVVF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_FJ545202 [III-Beta3-a] clone_Erie_ST84_PR_B2_rhodopsin_gene_partial_cds_FJ545202 gi|224384079|gb|FJ545202| Uncultured microorganism clone Erie.ST84.PR.B2 putative rhodopsin gene, partial cds. Uncultured microorganism clone Erie.ST84.PR.B2 putative rhodopsin gene, partial cds. FJ545202 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juil-05 Lake Erie other freshwater 41.9461 -81.6461 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na ATCACCGTGCCCCTCCTGATGGTTGAGTTCTACCTCATCCTCTCCGCGGTCACCAAGGTCTCGGGCGGTGTGTTCTGGCGCCTCATGATCGGCACCCTGGTCATGCTCATTGCCGGTTACCTCGGCGAAGCTGGCACCGTCGGCGCTTGGCCGGCCTTCATCGTCAGCATGGCTGGTTGGTTCTACATCATCTACGAGATCTACGCCGGTGAAGCCAGCAAGGTCAGCGCTGAGTCCGCTCCGCCTGCCGTCCAGTCTGCCTTCAAGCTGATGCGCGGCATCGTCGTCTTC ITVPLLMVEFYLILSAVTKVSGGVFWRLMIGTLVMLIAGYLGEAGTVGAWPAFIVSMAGWFYIIYEIYAGEASKVSAESAPPAVQSAFKLMRGIVVF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCCCTCCTGATGGTTGAGTTCTACCTCATCCTCTCCGCG---------GTC---ACCAAGGTCTCGGGC---GGTGTG------------------------------------TTCTGGCGC---CTCATGATCGGCACCCTGGTCATGCTCATTGCCGGTTACCTCGGCGAA---------GCT------------------GGC------ACC---------------------------------GTC------------------------------------------------------------------GGCGCT------------------TGGCCGGCC---TTCATCGTCAGCATGGCTGGTTGGTTCTACATCATCTACGAGATC---------------TAC------GCC---GGTGAAGCCAGCAAGGTCAGCGCTGAG------TCC---GCTCCGCCTGCCGTC---CAG---TCT---GCC---TTC---AAG---CTGATG---CGCGGCATCGTCGTCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---V-TKVSG-GV------------FWR-LMIGTLVMLIAGYLGE---A------G--T-----------V----------------------GA------WPA-FIVSMAGWFYIIYEI-----Y--A-GEASKVSAE--S-APPAV-Q-S-A-F-K-LM-RGIVVF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_FJ545199 [III-Beta3-a] clone_Erie_ST84_PR_F1_rhodopsin_gene_partial_cds_FJ545199 gi|224384073|gb|FJ545199| Uncultured microorganism clone Erie.ST84.PR.F1 putative rhodopsin gene, partial cds. Uncultured microorganism clone Erie.ST84.PR.F1 putative rhodopsin gene, partial cds. FJ545199 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juil-05 Lake Erie other freshwater 41.9461 -81.6461 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na ATCACCGTGCCCCTCCTGATGGTTGAGTTCTACCTCATCCTCTCCGCGGTCACCAAGGTCTCGGGCGGTGTGTTCTGGCGCCTCATGATCGGCACCCTGGTCATGCTCATTGCCGGTTACCTCGGCGAAGCTGGCACCGTCGGCGCTTGGCCGGCCTTCATCGTCAGCATGGCTGGTTGGTTCTACATCATCTACGAGATCTACGCCGGTGAAGCCAGCAAGGTCAGCGCTGAGTCCGCTCCGCCTGCCGTCCAGTCTGCCTTCAAGCTGATGCGCGGCATCGTCGTCTTC ITVPLLMVEFYLILSAVTKVSGGVFWRLMIGTLVMLIAGYLGEAGTVGAWPAFIVSMAGWFYIIYEIYAGEASKVSAESAPPAVQSAFKLMRGIVVF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCCCTCCTGATGGTTGAGTTCTACCTCATCCTCTCCGCG---------GTC---ACCAAGGTCTCGGGC---GGTGTG------------------------------------TTCTGGCGC---CTCATGATCGGCACCCTGGTCATGCTCATTGCCGGTTACCTCGGCGAA---------GCT------------------GGC------ACC---------------------------------GTC------------------------------------------------------------------GGCGCT------------------TGGCCGGCC---TTCATCGTCAGCATGGCTGGTTGGTTCTACATCATCTACGAGATC---------------TAC------GCC---GGTGAAGCCAGCAAGGTCAGCGCTGAG------TCC---GCTCCGCCTGCCGTC---CAG---TCT---GCC---TTC---AAG---CTGATG---CGCGGCATCGTCGTCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---V-TKVSG-GV------------FWR-LMIGTLVMLIAGYLGE---A------G--T-----------V----------------------GA------WPA-FIVSMAGWFYIIYEI-----Y--A-GEASKVSAE--S-APPAV-Q-S-A-F-K-LM-RGIVVF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_FJ545195 [III-Beta3-a] clone_Erie_ST84_PR_B1_rhodopsin_gene_partial_cds_FJ545195 gi|224384065|gb|FJ545195| Uncultured microorganism clone Erie.ST84.PR.B1 putative rhodopsin gene, partial cds. Uncultured microorganism clone Erie.ST84.PR.B1 putative rhodopsin gene, partial cds. FJ545195 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juil-05 Lake Erie other freshwater 41.9461 -81.6461 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na ATCACCGTGCCCCTCCTGATGGTTGAGTTCTTCCTCATCCTCTCCGCGGTCACCAAGGTCTCGGGCGGCGTTTTCTGGCGCCTCATGATCGGTACCCTGGTCATGCTCATCGCCGGTTACCTCGGCGAAGCCGGCACCGTCGGCGCCTGGCCGGCCTTCATCGTCAGCATGGCTGGTTGGTTCTACATCATCTACGAAATCTACGCCGGTGAAGCCAGCAAGGTCAGCGCTGAGTCCGCTCCGCCTGCCGTCCAGTCTGCCTTCAATCTCATGCGCGGCATCGTGGTCTTC ITVPLLMVEFFLILSAVTKVSGGVFWRLMIGTLVMLIAGYLGEAGTVGAWPAFIVSMAGWFYIIYEIYAGEASKVSAESAPPAVQSAFNLMRGIVVF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCCCTCCTGATGGTTGAGTTCTTCCTCATCCTCTCCGCG---------GTC---ACCAAGGTCTCGGGC---GGCGTT------------------------------------TTCTGGCGC---CTCATGATCGGTACCCTGGTCATGCTCATCGCCGGTTACCTCGGCGAA---------GCC------------------GGC------ACC---------------------------------GTC------------------------------------------------------------------GGCGCC------------------TGGCCGGCC---TTCATCGTCAGCATGGCTGGTTGGTTCTACATCATCTACGAAATC---------------TAC------GCC---GGTGAAGCCAGCAAGGTCAGCGCTGAG------TCC---GCTCCGCCTGCCGTC---CAG---TCT---GCC---TTC---AAT---CTCATG---CGCGGCATCGTGGTCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFFLILSA---V-TKVSG-GV------------FWR-LMIGTLVMLIAGYLGE---A------G--T-----------V----------------------GA------WPA-FIVSMAGWFYIIYEI-----Y--A-GEASKVSAE--S-APPAV-Q-S-A-F-N-LM-RGIVVF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_FJ545208 [III-Beta3-a] clone_Erie_ST84_PR_H2_rhodopsin_gene_partial_cds_FJ545208 gi|224384091|gb|FJ545208| Uncultured microorganism clone Erie.ST84.PR.H2 putative rhodopsin gene, partial cds. Uncultured microorganism clone Erie.ST84.PR.H2 putative rhodopsin gene, partial cds. FJ545208 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juil-05 Lake Erie other freshwater 41.9461 -81.6461 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na ATCACCGTGCCCCTCCTGATGGTTGAGTTCTTCCTCATCCTCTCCGCGGTCACCAAGGTCTCGGGCGGCGTTTTCTGGCGCCTCATGATCGGTACCCTGGTCATGCTCATCGCCGGTTACCTCGGCGAAGCCGGCACCGTCGGCGCCTGGCCGGCCTTCATCGTCAGCATGGCTGGTTGGTTCTACATCATCTACGAAATCTACGCCGGTGAAGCCAGCAAGGTCAGCGCTGAGTCCGCTCCGCCTGCCGTCCAGTCCGCCTTCAATCTCATGCGCGGCATCGTGGTCTTC ITVPLLMVEFFLILSAVTKVSGGVFWRLMIGTLVMLIAGYLGEAGTVGAWPAFIVSMAGWFYIIYEIYAGEASKVSAESAPPAVQSAFNLMRGIVVF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCCCTCCTGATGGTTGAGTTCTTCCTCATCCTCTCCGCG---------GTC---ACCAAGGTCTCGGGC---GGCGTT------------------------------------TTCTGGCGC---CTCATGATCGGTACCCTGGTCATGCTCATCGCCGGTTACCTCGGCGAA---------GCC------------------GGC------ACC---------------------------------GTC------------------------------------------------------------------GGCGCC------------------TGGCCGGCC---TTCATCGTCAGCATGGCTGGTTGGTTCTACATCATCTACGAAATC---------------TAC------GCC---GGTGAAGCCAGCAAGGTCAGCGCTGAG------TCC---GCTCCGCCTGCCGTC---CAG---TCC---GCC---TTC---AAT---CTCATG---CGCGGCATCGTGGTCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFFLILSA---V-TKVSG-GV------------FWR-LMIGTLVMLIAGYLGE---A------G--T-----------V----------------------GA------WPA-FIVSMAGWFYIIYEI-----Y--A-GEASKVSAE--S-APPAV-Q-S-A-F-N-LM-RGIVVF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_FJ545207 [III-Beta3-a] clone_Erie_ST84_PR_G2_rhodopsin_gene_partial_cds_FJ545207 gi|224384089|gb|FJ545207| Uncultured microorganism clone Erie.ST84.PR.G2 putative rhodopsin gene, partial cds. Uncultured microorganism clone Erie.ST84.PR.G2 putative rhodopsin gene, partial cds. FJ545207 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juil-05 Lake Erie other freshwater 41.9461 -81.6461 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na ATCACCGTGCCCCTCCTGATGGTTGAGTTCTTCCTCATCCTCTCCGCGGTCACCAAGGTCTCGGGCGGCGTTTTCTGGCGCCTCATGATCGGTACCCTGGTCATGCTCATCGCCGGTTACCTCGGCGAAGCCGGCACCGTCGGCGCCTGGCCGGCCTTCATCGTCAGCATGGCTGGTTGGTTCTACATCATCTACGAGATCTACGCCGGTGAAGCCAGCAAGGTCAGCGCTGAGTCCGCTCCGCCTGCCGTCCAGTCTGCCTTCAATCTCATGCGCGGCATCGTGGTCTTC ITVPLLMVEFFLILSAVTKVSGGVFWRLMIGTLVMLIAGYLGEAGTVGAWPAFIVSMAGWFYIIYEIYAGEASKVSAESAPPAVQSAFNLMRGIVVF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCCCTCCTGATGGTTGAGTTCTTCCTCATCCTCTCCGCG---------GTC---ACCAAGGTCTCGGGC---GGCGTT------------------------------------TTCTGGCGC---CTCATGATCGGTACCCTGGTCATGCTCATCGCCGGTTACCTCGGCGAA---------GCC------------------GGC------ACC---------------------------------GTC------------------------------------------------------------------GGCGCC------------------TGGCCGGCC---TTCATCGTCAGCATGGCTGGTTGGTTCTACATCATCTACGAGATC---------------TAC------GCC---GGTGAAGCCAGCAAGGTCAGCGCTGAG------TCC---GCTCCGCCTGCCGTC---CAG---TCT---GCC---TTC---AAT---CTCATG---CGCGGCATCGTGGTCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFFLILSA---V-TKVSG-GV------------FWR-LMIGTLVMLIAGYLGE---A------G--T-----------V----------------------GA------WPA-FIVSMAGWFYIIYEI-----Y--A-GEASKVSAE--S-APPAV-Q-S-A-F-N-LM-RGIVVF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_FJ545194 [III-Beta3-a] clone_Erie_ST84_PR_A1_rhodopsin_gene_partial_cds_FJ545194 gi|224384063|gb|FJ545194| Uncultured microorganism clone Erie.ST84.PR.A1 putative rhodopsin gene, partial cds. Uncultured microorganism clone Erie.ST84.PR.A1 putative rhodopsin gene, partial cds. FJ545194 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juil-05 Lake Erie other freshwater 41.9461 -81.6461 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na ATCACCGTGCCCCTCCTGATGGTTGAGTTCTACCTCATCCTCTCTGCGGTCACCAAGGTTTCGGGCGGCGTTTTCTGGCGCCTCATGATCGGTACCCTGGTGATGCTCATCGCCGGTTACCTCGGTGAAGCTGGCGCCGTCGGCGCTTGGCCGGCCTTCATCGTCAGCATGGCTGGTTGGTTCTACATCATCTACGAAATCTACGCCGGTGAAGCCAGCAAGGTCAGCGCTGAGTCCGCTCCTCCTGCCGTCCAGGGCGCCTTCAAGTTGATGCGCGGCATCGTCGTCTTC ITVPLLMVEFYLILSAVTKVSGGVFWRLMIGTLVMLIAGYLGEAGAVGAWPAFIVSMAGWFYIIYEIYAGEASKVSAESAPPAVQGAFKLMRGIVVF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCCCTCCTGATGGTTGAGTTCTACCTCATCCTCTCTGCG---------GTC---ACCAAGGTTTCGGGC---GGCGTT------------------------------------TTCTGGCGC---CTCATGATCGGTACCCTGGTGATGCTCATCGCCGGTTACCTCGGTGAA---------GCT------------------GGC------GCC---------------------------------GTC------------------------------------------------------------------GGCGCT------------------TGGCCGGCC---TTCATCGTCAGCATGGCTGGTTGGTTCTACATCATCTACGAAATC---------------TAC------GCC---GGTGAAGCCAGCAAGGTCAGCGCTGAG------TCC---GCTCCTCCTGCCGTC---CAG---GGC---GCC---TTC---AAG---TTGATG---CGCGGCATCGTCGTCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---V-TKVSG-GV------------FWR-LMIGTLVMLIAGYLGE---A------G--A-----------V----------------------GA------WPA-FIVSMAGWFYIIYEI-----Y--A-GEASKVSAE--S-APPAV-Q-G-A-F-K-LM-RGIVVF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_FJ545204 [III-Beta3-a] clone_Erie_ST84_PR_D2_rhodopsin_gene_partial_cds_FJ545204 gi|224384083|gb|FJ545204| Uncultured microorganism clone Erie.ST84.PR.D2 putative rhodopsin gene, partial cds. Uncultured microorganism clone Erie.ST84.PR.D2 putative rhodopsin gene, partial cds. FJ545204 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juil-05 Lake Erie other freshwater 41.9461 -81.6461 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na ATCACGGTGCCCCTCCTGATGGTTGAGTTCTACCTTATCCTCTCCGCGGTCACTAAGGTCTCCGGCGGCGTGTTCTGGCGCCTTATGATCGGTACCCTGGTGATGCTCATCGCCGGTTACCTCGGCGAAGCCGGCACCGTCGGCGCCTGGCCGGCCTTCATCGTCAGCATGGCCGGTTGGTTCTACATCATCTACGAAATCTACGCCGGTGAAGCCAGCAAGGTCAGCGCTGAGTCCGCACCGCCTGCCGTCCAGTCCGCCTTCAAGCTCATGCGTGGCATCGTCGTCTTC ITVPLLMVEFYLILSAVTKVSGGVFWRLMIGTLVMLIAGYLGEAGTVGAWPAFIVSMAGWFYIIYEIYAGEASKVSAESAPPAVQSAFKLMRGIVVF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACGGTGCCCCTCCTGATGGTTGAGTTCTACCTTATCCTCTCCGCG---------GTC---ACTAAGGTCTCCGGC---GGCGTG------------------------------------TTCTGGCGC---CTTATGATCGGTACCCTGGTGATGCTCATCGCCGGTTACCTCGGCGAA---------GCC------------------GGC------ACC---------------------------------GTC------------------------------------------------------------------GGCGCC------------------TGGCCGGCC---TTCATCGTCAGCATGGCCGGTTGGTTCTACATCATCTACGAAATC---------------TAC------GCC---GGTGAAGCCAGCAAGGTCAGCGCTGAG------TCC---GCACCGCCTGCCGTC---CAG---TCC---GCC---TTC---AAG---CTCATG---CGTGGCATCGTCGTCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---V-TKVSG-GV------------FWR-LMIGTLVMLIAGYLGE---A------G--T-----------V----------------------GA------WPA-FIVSMAGWFYIIYEI-----Y--A-GEASKVSAE--S-APPAV-Q-S-A-F-K-LM-RGIVVF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_FJ545196 [III-Beta3-a] clone_Erie_ST84_PR_C1_rhodopsin_gene_partial_cds_FJ545196 gi|224384067|gb|FJ545196| Uncultured microorganism clone Erie.ST84.PR.C1 putative rhodopsin gene, partial cds. Uncultured microorganism clone Erie.ST84.PR.C1 putative rhodopsin gene, partial cds. FJ545196 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juil-05 Lake Erie other freshwater 41.9461 -81.6461 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na ATCACCGTGCCCCTCCTGATGGTTGAGTTCTTCCTCATCCTCTCCGCGGTCACCAAGGTCTCGGGCGGCGTTTTCTGGCGCCTCATGATCGGCACTCTGGTGATGCTCATCGCCGGTTACCTCGGCGAAGCCGGCACCGTCGGCGCCTGGCCGGCCTTCATCGTCAGCATGGCTGGTTGGTTCTACATCATCTACGAAATCTACGCCGGCGAAGCCAGCAAGGTCAGCGCTGAGTCCGCTCCGCCTGCCGTCCAGTCTGCCTTCAATCTCATGCGCGGCATCGTGGTCTTC ITVPLLMVEFFLILSAVTKVSGGVFWRLMIGTLVMLIAGYLGEAGTVGAWPAFIVSMAGWFYIIYEIYAGEASKVSAESAPPAVQSAFNLMRGIVVF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCCCTCCTGATGGTTGAGTTCTTCCTCATCCTCTCCGCG---------GTC---ACCAAGGTCTCGGGC---GGCGTT------------------------------------TTCTGGCGC---CTCATGATCGGCACTCTGGTGATGCTCATCGCCGGTTACCTCGGCGAA---------GCC------------------GGC------ACC---------------------------------GTC------------------------------------------------------------------GGCGCC------------------TGGCCGGCC---TTCATCGTCAGCATGGCTGGTTGGTTCTACATCATCTACGAAATC---------------TAC------GCC---GGCGAAGCCAGCAAGGTCAGCGCTGAG------TCC---GCTCCGCCTGCCGTC---CAG---TCT---GCC---TTC---AAT---CTCATG---CGCGGCATCGTGGTCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFFLILSA---V-TKVSG-GV------------FWR-LMIGTLVMLIAGYLGE---A------G--T-----------V----------------------GA------WPA-FIVSMAGWFYIIYEI-----Y--A-GEASKVSAE--S-APPAV-Q-S-A-F-N-LM-RGIVVF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JX863216 [III-Beta3-a] MALINA_OTU68_452_L_env_samples_JX863216 gi|425477382|gb|JX863216| Uncultured bacterium clone MALINA OTU68 452 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU68 452 L putative proteorhodopsin gene, partial cds JX863216 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 13Aug2009 0m_depth Arctic Ocean marine 69.25 -137.2 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTCATCACTGTGCCCCTCTTGATGGTCGAGTTCTACATCATCCTCAACGCCGTGACCAAGGTCCCGGGTGGCGTGTTCTGGCGCCTCATCATCGGTACCCTGGTGATGCTCATCGGTGGTTACCTCGGTGAAGCCAGCCTCATGAGCGCTTGGCCCGCCTTCGCCATCGGCATGGCTGGTTGGGCTTACATCATCTATGAAATCTACGCCGGTGAAGCCAGCAAGATCAACGCCGAGTCCGCGACCCCCGCGGTGCAGTCGGCTTTCAAGCTCATGCGAAACATCGTGCTGATT WLITVPLLMVEFYIILNAVTKVPGGVFWRLIIGTLVMLIGGYLGEASLMSAWPAFAIGMAGWAYIIYEIYAGEASKINAESATPAVQSAFKLMRNIVLI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTCATCACTGTGCCCCTCTTGATGGTCGAGTTCTACATCATCCTCAACGCC---------GTG---ACCAAGGTCCCGGGT---GGCGTG------------------------------------TTCTGGCGC---CTCATCATCGGTACCCTGGTGATGCTCATCGGTGGTTACCTCGGTGAA---------GCC------------------AGC------CTC---------------------------------ATG------------------------------------------------------------------AGCGCT------------------TGGCCCGCC---TTCGCCATCGGCATGGCTGGTTGGGCTTACATCATCTATGAAATC---------------TAC------GCC---GGTGAAGCCAGCAAGATCAACGCCGAG------TCC---GCGACCCCCGCGGTG---CAG---TCG---GCT---TTC---AAG---CTCATG---CGAAACATCGTGCTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYIILNA---V-TKVPG-GV------------FWR-LIIGTLVMLIGGYLGE---A------S--L-----------M----------------------SA------WPA-FAIGMAGWAYIIYEI-----Y--A-GEASKINAE--S-ATPAV-Q-S-A-F-K-LM-RNIVLI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_FJ545162 [III-Beta3-a] clone_Superior_CD1_PR_D1_rhodopsin_gene_partial_cds_FJ545162 gi|224383999|gb|FJ545162| Uncultured microorganism clone Superior.CD1.PR.D1 putative rhodopsin gene, partial cds. Uncultured microorganism clone Superior.CD1.PR.D1 putative rhodopsin gene, partial cds. FJ545162 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juin-05 Lake Superior other freshwater 47.3 -91.67 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na ATCACCGTGCCCCTCCTGATGGTCGAGTTCTACATCATCCTCAGCGCCGTGACCAAGGTCTCGGGCGGCGTGTTCTGGCGCCTCATGGTCGGCACCCTGGTGATGCTCATCGGTAGTTACCTCGGCGAAGCCAGCCTCATGGGCGCTTGGCCCGCTTTCGCCATCGGCATGGCTGGTTGGGCTTACATCATCTATGAAATCTACGCCGGTGAAGCCAGCAAGATCAACGCCGAGTCCGCGACCCCCGCGGTGCAGTCGGCTTTCAAGCTCATGCGCAACATCGTGCTGATC ITVPLLMVEFYIILSAVTKVSGGVFWRLMVGTLVMLIGSYLGEASLMGAWPAFAIGMAGWAYIIYEIYAGEASKINAESATPAVQSAFKLMRNIVLI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCCCTCCTGATGGTCGAGTTCTACATCATCCTCAGCGCC---------GTG---ACCAAGGTCTCGGGC---GGCGTG------------------------------------TTCTGGCGC---CTCATGGTCGGCACCCTGGTGATGCTCATCGGTAGTTACCTCGGCGAA---------GCC------------------AGC------CTC---------------------------------ATG------------------------------------------------------------------GGCGCT------------------TGGCCCGCT---TTCGCCATCGGCATGGCTGGTTGGGCTTACATCATCTATGAAATC---------------TAC------GCC---GGTGAAGCCAGCAAGATCAACGCCGAG------TCC---GCGACCCCCGCGGTG---CAG---TCG---GCT---TTC---AAG---CTCATG---CGCAACATCGTGCTGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYIILSA---V-TKVSG-GV------------FWR-LMVGTLVMLIGSYLGE---A------S--L-----------M----------------------GA------WPA-FAIGMAGWAYIIYEI-----Y--A-GEASKINAE--S-ATPAV-Q-S-A-F-K-LM-RNIVLI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_FJ545159 [III-Beta3-a] clone_Superior_CD1_PR_A1_rhodopsin_gene_partial_cds_FJ545159 gi|224383993|gb|FJ545159| Uncultured microorganism clone Superior.CD1.PR.A1 putative rhodopsin gene, partial cds. Uncultured microorganism clone Superior.CD1.PR.A1 putative rhodopsin gene, partial cds. FJ545159 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juin-05 Lake Superior other freshwater 47.3 -91.67 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na ATCACCGTGCCCCTCCTGATGGTCGAGTTCTACATCATCCTCAGCGCCGTGACCAAGGTCTCGGGCGGCGTGTTCTGGCGCCTCATGATCGGCACCCTGGTGATGCTCATCGGTGGTTACCTCGGCGAAGCCAGCCTCATGGGCGCTTGGCCCGCTTTCGCCATCGGCATGGCTGGTTGGGCTTACATCATCTATGAAATCTACGCCGGTGAAGCCAGCAAGATCAACGCCGAGTCCGCGACCCCCGCGGTGCAGTCGGCTTTCAAGCTCATGCGCAACATCGTGCTGATC ITVPLLMVEFYIILSAVTKVSGGVFWRLMIGTLVMLIGGYLGEASLMGAWPAFAIGMAGWAYIIYEIYAGEASKINAESATPAVQSAFKLMRNIVLI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCCCTCCTGATGGTCGAGTTCTACATCATCCTCAGCGCC---------GTG---ACCAAGGTCTCGGGC---GGCGTG------------------------------------TTCTGGCGC---CTCATGATCGGCACCCTGGTGATGCTCATCGGTGGTTACCTCGGCGAA---------GCC------------------AGC------CTC---------------------------------ATG------------------------------------------------------------------GGCGCT------------------TGGCCCGCT---TTCGCCATCGGCATGGCTGGTTGGGCTTACATCATCTATGAAATC---------------TAC------GCC---GGTGAAGCCAGCAAGATCAACGCCGAG------TCC---GCGACCCCCGCGGTG---CAG---TCG---GCT---TTC---AAG---CTCATG---CGCAACATCGTGCTGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYIILSA---V-TKVSG-GV------------FWR-LMIGTLVMLIGGYLGE---A------S--L-----------M----------------------GA------WPA-FAIGMAGWAYIIYEI-----Y--A-GEASKINAE--S-ATPAV-Q-S-A-F-K-LM-RNIVLI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_FJ545168 [III-Beta3-a] clone_Superior_CD1_PR_D2_rhodopsin_gene_partial_cds_FJ545168 gi|224384011|gb|FJ545168| Uncultured microorganism clone Superior.CD1.PR.D2 putative rhodopsin gene, partial cds. Uncultured microorganism clone Superior.CD1.PR.D2 putative rhodopsin gene, partial cds. FJ545168 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juin-05 Lake Superior other freshwater 47.3 -91.67 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na ATCACCGTGCCCCTCCTGATGGTCGAGTTCTACATCATCCTCAGCGCCGTGACCAAGGTCTCGGGCGGCGTGTTCTGGCGCCTCATGATCGGCACCCCGGTGATGCTCATCGGTGGTTACCTCGGTGAAGCCGACCTCATGGGCGAATGGCCCGCTTTCGCCATCGGCATGGCTGGTTGGGCTTACATCATCTATGAAATCTACGCCGGTGAAGCCAGCAAGATCAACGCCGAGTCCGCGACCCCCGCGGTGCAGTCGGCTTTCAAGCTCATGCGCAACATCGTGCTGATC ITVPLLMVEFYIILSAVTKVSGGVFWRLMIGTPVMLIGGYLGEADLMGEWPAFAIGMAGWAYIIYEIYAGEASKINAESATPAVQSAFKLMRNIVLI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCCCTCCTGATGGTCGAGTTCTACATCATCCTCAGCGCC---------GTG---ACCAAGGTCTCGGGC---GGCGTG------------------------------------TTCTGGCGC---CTCATGATCGGCACCCCGGTGATGCTCATCGGTGGTTACCTCGGTGAA---------GCC------------------GAC------CTC---------------------------------ATG------------------------------------------------------------------GGCGAA------------------TGGCCCGCT---TTCGCCATCGGCATGGCTGGTTGGGCTTACATCATCTATGAAATC---------------TAC------GCC---GGTGAAGCCAGCAAGATCAACGCCGAG------TCC---GCGACCCCCGCGGTG---CAG---TCG---GCT---TTC---AAG---CTCATG---CGCAACATCGTGCTGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYIILSA---V-TKVSG-GV------------FWR-LMIGTPVMLIGGYLGE---A------D--L-----------M----------------------GE------WPA-FAIGMAGWAYIIYEI-----Y--A-GEASKINAE--S-ATPAV-Q-S-A-F-K-LM-RNIVLI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_JX863189 [III-Beta3-a] MALINA_OTU26_433_L_env_samples_JX863189 gi|425477328|gb|JX863189| Uncultured bacterium clone MALINA OTU26 433 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU26 433 L putative proteorhodopsin gene, partial cds JX863189 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 13Aug2009 0m_depth Arctic Ocean marine 69.25 -137.2 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGATCACGGTTCCTTTGCTGATGGTCGAATTTTACTTAATTCTCTCAGCGATCACCAAGGTTCCTGGTGGCGTGTTTTGGCGCTTGATGATCGGAACGATCGTGATGCTTGTCGGTGGATATCTCGGCGAGGCCGGGTATATGGACACTTGGGTTGCATTCATCATCGGAATGGCCGGCTGGGCATTTATCCTTTGGGAAATCTTTTTCGGCGTGGCTGGAAAAATCAATGCTAACTCAGCACCCCCAGCAGTGCAGTCTGCTTTCAACGTCATGCGTTGGATTGTGGTGATT WLITVPLLMVEFYLILSAITKVPGGVFWRLMIGTIVMLVGGYLGEAGYMDTWVAFIIGMAGWAFILWEIFFGVAGKINANSAPPAVQSAFNVMRWIVVI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGATCACGGTTCCTTTGCTGATGGTCGAATTTTACTTAATTCTCTCAGCG---------ATC---ACCAAGGTTCCTGGT---GGCGTG------------------------------------TTTTGGCGC---TTGATGATCGGAACGATCGTGATGCTTGTCGGTGGATATCTCGGCGAG---------GCC------------------GGG------TAT---------------------------------ATG------------------------------------------------------------------GACACT------------------TGGGTTGCA---TTCATCATCGGAATGGCCGGCTGGGCATTTATCCTTTGGGAAATC---------------TTT------TTC---GGCGTGGCTGGAAAAATCAATGCTAAC------TCA---GCACCCCCAGCAGTG---CAG---TCT---GCT---TTC---AAC---GTCATG---CGTTGGATTGTGGTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYLILSA---I-TKVPG-GV------------FWR-LMIGTIVMLVGGYLGE---A------G--Y-----------M----------------------DT------WVA-FIIGMAGWAFILWEI-----F--F-GVAGKINAN--S-APPAV-Q-S-A-F-N-VM-RWIVVI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_FJ618966 [III-Beta3-a] PR_108_08_22_env_samples_FJ618966 gi|223046815|gb|FJ618966| Uncultured bacterium clone PR 108 08 22 proteorhodopsin gene, partial cds Uncultured bacterium clone PR 108 08 22 proteorhodopsin gene, partial cds FJ618966 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-juil-09 #na Arctic_Ocean Arctic Ocean marine 71.37 -156.68 Photoheterotrophic microbes in the Arctic Ocean in summer and winter Cottrell,M.T. and Kirchman,D.L. Appl. Environ. Microbiol. 75 (15), 49584966 (2009) 19502441 #na TATGTTGATTGGTTGATCACGGTTCCTTTGCTGATGGTCGAATTTTACTTAATTCTCTCAGCGATCACCAAGGTTCCTGGTGGCGTGTTTTGGCGCTTGATGATCGGAACGATCGTGATGCTTGTCGGTGGATATCTCGGCGAGGCCGGGTATATGGACACTTGGGTTGCATTCATCATCGGAATGGCCGGCTGGGCATTTATCCTTTGGGAAATCTTTTTCGGCGAGGCTGGAAAAATCAATGCTAACTCAGCACCCCCAGCAGTGCAGTCTGCTTTCAACGTCATGCGTTGGATTGTGGTGATTGGGTGGGCAATATAT YVDWLITVPLLMVEFYLILSAITKVPGGVFWRLMIGTIVMLVGGYLGEAGYMDTWVAFIIGMAGWAFILWEIFFGEAGKINANSAPPAVQSAFNVMRWIVVIGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTTGATTGG------------------------TTGATCACGGTTCCTTTGCTGATGGTCGAATTTTACTTAATTCTCTCAGCG---------ATC---ACCAAGGTTCCTGGT---GGCGTG------------------------------------TTTTGGCGC---TTGATGATCGGAACGATCGTGATGCTTGTCGGTGGATATCTCGGCGAG---------GCC------------------GGG------TAT---------------------------------ATG------------------------------------------------------------------GACACT------------------TGGGTTGCA---TTCATCATCGGAATGGCCGGCTGGGCATTTATCCTTTGGGAAATC---------------TTT------TTC---GGCGAGGCTGGAAAAATCAATGCTAAC------TCA---GCACCCCCAGCAGTG---CAG---TCT---GCT---TTC---AAC---GTCATG---CGTTGGATTGTGGTGATT---------------------------------------------------------------GGGTGG---------GCAATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LITVPLLMVEFYLILSA---I-TKVPG-GV------------FWR-LMIGTIVMLVGGYLGE---A------G--Y-----------M----------------------DT------WVA-FIIGMAGWAFILWEI-----F--F-GEAGKINAN--S-APPAV-Q-S-A-F-N-VM-RWIVVI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Beta3-a]_JX863220 [III-Beta3-a] MALINA_OTU72_480_L_env_samples_JX863220 gi|425477390|gb|JX863220| Uncultured bacterium clone MALINA OTU72 480 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU72 480 L putative proteorhodopsin gene, partial cds JX863220 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 13Aug2009 0m_depth Arctic Ocean marine 69.25 -137.2 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGATTATCACTGTTCCATTGCTGATGGTTGAGTTCTACCTCATCCTTTCAGCGATTACCAAAGTTCCGAGTGGAGTTTTTTGGAGATTGATGATTGGCACGCTCGTGATGCTGGTTGGCGGTTATCTCGGCGAGGCCGGGAGGATCAATGTGTGGCTTGGCTTCATCATTGGAATGATCGGTTGGTTTTTCATCCTCTGGGAAATCTTCGCTGGCGAAGCTGGTAAAATCAACGCAGCCTCCGCGCCTCCATCAGTGCAAGTGGCTTTCAACCTCATGCGCCGGATCGTGGTAGTG WIITVPLLMVEFYLILSAITKVPSGVFWRLMIGTLVMLVGGYLGEAGRINVWLGFIIGMIGWFFILWEIFAGEAGKINAASAPPSVQVAFNLMRRIVVV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------ATTATCACTGTTCCATTGCTGATGGTTGAGTTCTACCTCATCCTTTCAGCG---------ATT---ACCAAAGTTCCGAGT---GGAGTT------------------------------------TTTTGGAGA---TTGATGATTGGCACGCTCGTGATGCTGGTTGGCGGTTATCTCGGCGAG---------GCC------------------GGG------AGG---------------------------------ATC------------------------------------------------------------------AATGTG------------------TGGCTTGGC---TTCATCATTGGAATGATCGGTTGGTTTTTCATCCTCTGGGAAATC---------------TTC------GCT---GGCGAAGCTGGTAAAATCAACGCAGCC------TCC---GCGCCTCCATCAGTG---CAA---GTG---GCT---TTC---AAC---CTCATG---CGCCGGATCGTGGTAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------IITVPLLMVEFYLILSA---I-TKVPS-GV------------FWR-LMIGTLVMLVGGYLGE---A------G--R-----------I----------------------NV------WLG-FIIGMIGWFFILWEI-----F--A-GEAGKINAA--S-APPSV-Q-V-A-F-N-LM-RRIVVV-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_DQ422479 [III-Beta3-a] clone_med-tb04-50m-c7_DQ422479 gi|90024478|gb|DQ422479| Uncultured bacterium clone med-tb04-50m-c7 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-c7 putative proteorhodopsin gene, partial cds. DQ422479 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na CGATACATAGACTGGCTTATTACTGTCCCATTGCTGATGGTTGAGTTCTACCTCATCCTTTCAGCGATTACCAAAGTCCCGAGTGGAGTTTTTTGGAGATTGATGATTGGCACGCTCGTGATGCTGATTGGCGGTTATCTCGGTGAAGCCGGGAAACTCAATGTCTGGGTCGGTTTTGCCATCGGAATGCTCGGATGGTTCTACATCATCTGGGAAATTTTCGCCGGCGAAGCTGGAAAAATCAACGCGGATTCCGCGCCTCCATCCGTGCAGGTCGCCTTCAACCTCATGCGCTGGATCGTGGTGGTCGGTTGGGCTATTTATCCA RYIDWLITVPLLMVEFYLILSAITKVPSGVFWRLMIGTLVMLIGGYLGEAGKLNVWVGFAIGMLGWFYIIWEIFAGEAGKINADSAPPSVQVAFNLMRWIVVVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATAGACTGG------------------------CTTATTACTGTCCCATTGCTGATGGTTGAGTTCTACCTCATCCTTTCAGCG---------ATT---ACCAAAGTCCCGAGT---GGAGTT------------------------------------TTTTGGAGA---TTGATGATTGGCACGCTCGTGATGCTGATTGGCGGTTATCTCGGTGAA---------GCC------------------GGG------AAA---------------------------------CTC------------------------------------------------------------------AATGTC------------------TGGGTCGGT---TTTGCCATCGGAATGCTCGGATGGTTCTACATCATCTGGGAAATT---------------TTC------GCC---GGCGAAGCTGGAAAAATCAACGCGGAT------TCC---GCGCCTCCATCCGTG---CAG---GTC---GCC---TTC---AAC---CTCATG---CGCTGGATCGTGGTGGTC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYLILSA---I-TKVPS-GV------------FWR-LMIGTLVMLIGGYLGE---A------G--K-----------L----------------------NV------WVG-FAIGMLGWFYIIWEI-----F--A-GEAGKINAD--S-APPSV-Q-V-A-F-N-LM-RWIVVV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Beta3-a]_FJ545161 [III-Beta3-a] clone_Superior_CD1_PR_C1_rhodopsin_gene_partial_cds_FJ545161 gi|224383997|gb|FJ545161| Uncultured microorganism clone Superior.CD1.PR.C1 putative rhodopsin gene, partial cds. Uncultured microorganism clone Superior.CD1.PR.C1 putative rhodopsin gene, partial cds. FJ545161 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juin-05 Lake Superior other freshwater 47.3 -91.67 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na ATCACGGTCCCCCTGCTGATGGTCGAGTTCTACTTGATCTTGTCGGCCATCGCAAAAGTGCCAGTTGGTATCTTCTGGCGCCTGATGATTGGCACATTTGTGATGCTCATCGGCGGCTACCTGGGTGAGACCGGTTACATGGCGGTGTGGCCAGCGTTCATTATCGGCATGCTTGGCTGGGCCTACATTCTGTACGAGATTTTCATGGGTCAAGCCAGCAAAATTAACGCGGAAAGCTCGCCTCCCGCAGTGCAGTCGGCTTTCAATACCATGCGCTGGATCGTCACCATT ITVPLLMVEFYLILSAIAKVPVGIFWRLMIGTFVMLIGGYLGETGYMAVWPAFIIGMLGWAYILYEIFMGQASKINAESSPPAVQSAFNTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACGGTCCCCCTGCTGATGGTCGAGTTCTACTTGATCTTGTCGGCC---------ATC---GCAAAAGTGCCAGTT---GGTATC------------------------------------TTCTGGCGC---CTGATGATTGGCACATTTGTGATGCTCATCGGCGGCTACCTGGGTGAG---------ACC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GCGGTG------------------TGGCCAGCG---TTCATTATCGGCATGCTTGGCTGGGCCTACATTCTGTACGAGATT---------------TTC------ATG---GGTCAAGCCAGCAAAATTAACGCGGAA------AGC---TCGCCTCCCGCAGTG---CAG---TCG---GCT---TTC---AAT---ACCATG---CGCTGGATCGTCACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---I-AKVPV-GI------------FWR-LMIGTFVMLIGGYLGE---T------G--Y-----------M----------------------AV------WPA-FIIGMLGWAYILYEI-----F--M-GQASKINAE--S-SPPAV-Q-S-A-F-N-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_FJ545164 [III-Beta3-a] clone_Superior_CD1_PR_F1_rhodopsin_gene_partial_cds_FJ545164 gi|224384003|gb|FJ545164| Uncultured microorganism clone Superior.CD1.PR.F1 putative rhodopsin gene, partial cds. Uncultured microorganism clone Superior.CD1.PR.F1 putative rhodopsin gene, partial cds. FJ545164 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juin-05 Lake Superior other freshwater 47.3 -91.67 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na ATCACCGTGCCACTTTTGATGATTGAGTTTTACCTGATTTTGTCAGCCATCACGAAGGTTCCAGGCGGCGTTTTTTGGCGCTTGATGATTGGTACGTTGGTGATGTTGGTCGGTGGTTATTTGGGTGAGGCGGGTTACATGGCTGTGCTGCCAGCGTTTATCATCGGTATGGTTGGATGGGCATACATTCTCTGGGAAATTTTCTTCGGTCAAGCTGGCAAAATCAACGCTGAAAGTGCACCTCCAGCAGTCAAATCCGCCTTTAATACGATGCGCTGGATTGTCACCATC ITVPLLMIEFYLILSAITKVPGGVFWRLMIGTLVMLVGGYLGEAGYMAVLPAFIIGMVGWAYILWEIFFGQAGKINAESAPPAVKSAFNTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACCGTGCCACTTTTGATGATTGAGTTTTACCTGATTTTGTCAGCC---------ATC---ACGAAGGTTCCAGGC---GGCGTT------------------------------------TTTTGGCGC---TTGATGATTGGTACGTTGGTGATGTTGGTCGGTGGTTATTTGGGTGAG---------GCG------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GCTGTG------------------CTGCCAGCG---TTTATCATCGGTATGGTTGGATGGGCATACATTCTCTGGGAAATT---------------TTC------TTC---GGTCAAGCTGGCAAAATCAACGCTGAA------AGT---GCACCTCCAGCAGTC---AAA---TCC---GCC---TTT---AAT---ACGATG---CGCTGGATTGTCACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMIEFYLILSA---I-TKVPG-GV------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------M----------------------AV------LPA-FIIGMVGWAYILWEI-----F--F-GQAGKINAE--S-APPAV-K-S-A-F-N-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-AAA024O16]_EU563270 [III-Beta3-AAA024O16] KIN24_env_samples_EU563270 gi|171770550|gb|EU563270| Uncultured microorganism clone KIN24 putative proteorhodopsin gene, partial cds Uncultured microorganism clone KIN24 putative proteorhodopsin gene, partial cds EU563270 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/SCGC_AAA024O16-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 SCGC_AAA024O16-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 2003 Lake_Kinneret other freshwater 32.08 35.07 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na AGCTATATTGATTGGCTGATCACGGTGCCGCTGTTAATGATCGAGTTTTATCTGATTTTGGCAGCAATCGCCAAAGTACCAGGCGGTGTGTTCTGGCGTTTGATGGTCGGTACTCTGGTCATGTTAGTGGGCGGTTATGTTGGCGAAGCTGGGTATGTACCTGTTTGGCCAGCTTTCATCGTTGGCATGATCGGTTGGTTCTACATCCTGTATGAAATCTTCGCTGGTGAAGCCAGTAAGATTAATGCTGCCAGCGCACCACCTTCAGTGCAGTCTGCATTTAGCCTAATGCGCTGGATCGTGACAATTGGGTGGGCAATATATCCA SYIDWLITVPLLMIEFYLILAAIAKVPGGVFWRLMVGTLVMLVGGYVGEAGYVPVWPAFIVGMIGWFYILYEIFAGEASKINAASAPPSVQSAFSLMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGATTGG------------------------CTGATCACGGTGCCGCTGTTAATGATCGAGTTTTATCTGATTTTGGCAGCA---------ATC---GCCAAAGTACCAGGC---GGTGTG------------------------------------TTCTGGCGT---TTGATGGTCGGTACTCTGGTCATGTTAGTGGGCGGTTATGTTGGCGAA---------GCT------------------GGG------TAT---------------------------------GTA------------------------------------------------------------------CCTGTT------------------TGGCCAGCT---TTCATCGTTGGCATGATCGGTTGGTTCTACATCCTGTATGAAATC---------------TTC------GCT---GGTGAAGCCAGTAAGATTAATGCTGCC------AGC---GCACCACCTTCAGTG---CAG---TCT---GCA---TTT---AGC---CTAATG---CGCTGGATCGTGACAATT---------------------------------------------------------------GGGTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMIEFYLILAA---I-AKVPG-GV------------FWR-LMVGTLVMLVGGYVGE---A------G--Y-----------V----------------------PV------WPA-FIVGMIGWFYILYEI-----F--A-GEASKINAA--S-APPSV-Q-S-A-F-S-LM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Beta3-AAA024O16]_EU563299 [III-Beta3-AAA024O16] L658_SurfaceA_env_samples_EU563299 gi|171770608|gb|EU563299| Uncultured microorganism clone L658 SurfaceA putative proteorhodopsin gene, partial cds Uncultured microorganism clone L658 SurfaceA putative proteorhodopsin gene, partial cds EU563299 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/SCGC_AAA024O16-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 SCGC_AAA024O16-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 Aug2002 Lake_L658_at_3m_depth other freshwater 49.13 -93.13 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na CGGTATATAGATTGGCTGATCACTGTGCCGCTGTTAATGATCGAGTTTTATCTGATTTTGGCAGCGATCGCCAAGGTACCTGGCGGCGTCTTCTGGCGTTTGATGATCGGTACTCTGGTCATGCTAGTTGGCGGCTATGTTGGTGAAGCAGGTTATGCACCTGTTTGGCCAGCGTTCATCGTTGGCATGATCGGTTGGTTCTACATTCTGTACGAAATCTTCGCTGGCGAAGCCAGTAAGATTAGCGCAGCAAGTGCTCCACCATCAGTGCAATCAGCTTTTAGCCTAATGCGCTGGATCGTGACCATTGGCTGGGCAATATACCCA RYIDWLITVPLLMIEFYLILAAIAKVPGGVFWRLMIGTLVMLVGGYVGEAGYAPVWPAFIVGMIGWFYILYEIFAGEASKISAASAPPSVQSAFSLMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTATATAGATTGG------------------------CTGATCACTGTGCCGCTGTTAATGATCGAGTTTTATCTGATTTTGGCAGCG---------ATC---GCCAAGGTACCTGGC---GGCGTC------------------------------------TTCTGGCGT---TTGATGATCGGTACTCTGGTCATGCTAGTTGGCGGCTATGTTGGTGAA---------GCA------------------GGT------TAT---------------------------------GCA------------------------------------------------------------------CCTGTT------------------TGGCCAGCG---TTCATCGTTGGCATGATCGGTTGGTTCTACATTCTGTACGAAATC---------------TTC------GCT---GGCGAAGCCAGTAAGATTAGCGCAGCA------AGT---GCTCCACCATCAGTG---CAA---TCA---GCT---TTT---AGC---CTAATG---CGCTGGATCGTGACCATT---------------------------------------------------------------GGCTGG---------GCAATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMIEFYLILAA---I-AKVPG-GV------------FWR-LMIGTLVMLVGGYVGE---A------G--Y-----------A----------------------PV------WPA-FIVGMIGWFYILYEI-----F--A-GEASKISAA--S-APPSV-Q-S-A-F-S-LM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Beta3-AAA024O16]_JX863215 [III-Beta3-AAA024O16] MALINA_OTU67b_467_L_env_samples_JX863215 gi|425477380|gb|JX863215| Uncultured bacterium clone MALINA OTU67b 467 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU67b 467 L putative proteorhodopsin gene, partial cds JX863215 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/SCGC_AAA024O16-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 SCGC_AAA024O16-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 13Aug2009 0m_depth Arctic Ocean marine 69.25 -137.2 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGATCACAGTGCCGCTGTTAATGATCGAGTTTTATCTGATTTTGGCTGCGATCGCCAAGGTACCAGGCGGTGTGTTCTGGCGTTTGATGATCGGTACTCTGGTCATGTTAGTTGGCGGTTATGTTGGTGAAGCAGGTTATGCACCTGTCTGGCCAGCATTTATCGTTGGTATGATCGGTTGGTTCTACATTCTGTATGAAATCTTCGCCGGCGAAGCCAGCAAGATTAATGCAGCAAGTGCTCCACCATCAGTGCAATCGGCATTTAGCTTAATGCGTTGGATCGTAACCATT WLITVPLLMIEFYLILAAIAKVPGGVFWRLMIGTLVMLVGGYVGEAGYAPVWPAFIVGMIGWFYILYEIFAGEASKINAASAPPSVQSAFSLMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATCACAGTGCCGCTGTTAATGATCGAGTTTTATCTGATTTTGGCTGCG---------ATC---GCCAAGGTACCAGGC---GGTGTG------------------------------------TTCTGGCGT---TTGATGATCGGTACTCTGGTCATGTTAGTTGGCGGTTATGTTGGTGAA---------GCA------------------GGT------TAT---------------------------------GCA------------------------------------------------------------------CCTGTC------------------TGGCCAGCA---TTTATCGTTGGTATGATCGGTTGGTTCTACATTCTGTATGAAATC---------------TTC------GCC---GGCGAAGCCAGCAAGATTAATGCAGCA------AGT---GCTCCACCATCAGTG---CAA---TCG---GCA---TTT---AGC---TTAATG---CGTTGGATCGTAACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFYLILAA---I-AKVPG-GV------------FWR-LMIGTLVMLVGGYVGE---A------G--Y-----------A----------------------PV------WPA-FIVGMIGWFYILYEI-----F--A-GEASKINAA--S-APPSV-Q-S-A-F-S-LM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-AAA024O16]_HQ663738 [III-Beta3-AAA024O16] SCGC_AAA024O16_Betaproteobacteria_HQ663738 gi|325163076|gb|HQ663738| Beta proteobacterium SCGC AAA024O16 rhodopsin gene, partial cds Beta proteobacterium SCGC AAA024O16 rhodopsin gene, partial cds HQ663738 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/SCGC_AAA024O16-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 SCGC_AAA024O16-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Betaproteobacteria] taxon:938767 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Sparkling other freshwater 46.0095 -89.7006 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATATTGATTGGCTGATCACAGTGCCGTTGTTAATGATCGAGTTTTATTTGATTTTGGCTGCGATCGCCAAAGTACCCGGCGGTGTGTTCTGGCGTTTGATGATCGGTACTCTGGTCATGTTAGTTGGCGGTTATGTTGGCGAAGCGGGTTATGCACCTGTCTGGCCAGCGTTCATCGTTGGCATGATCGGTTGGTTCTACATTCTGTATGAAATCTTCGCCGGTGAAGCCAGCAAGATTAACGCAGCACGTGCTCCACCATCAGTGCAATCGGCATTTAGTTTAATGCGTTGGATTGTGACCATTGGATGGGCAATTTACCCGGTCATA YIDWLITVPLLMIEFYLILAAIAKVPGGVFWRLMIGTLVMLVGGYVGEAGYAPVWPAFIVGMIGWFYILYEIFAGEASKINAARAPPSVQSAFSLMRWIVTIGWAIYPVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATTGATTGG------------------------CTGATCACAGTGCCGTTGTTAATGATCGAGTTTTATTTGATTTTGGCTGCG---------ATC---GCCAAAGTACCCGGC---GGTGTG------------------------------------TTCTGGCGT---TTGATGATCGGTACTCTGGTCATGTTAGTTGGCGGTTATGTTGGCGAA---------GCG------------------GGT------TAT---------------------------------GCA------------------------------------------------------------------CCTGTC------------------TGGCCAGCG---TTCATCGTTGGCATGATCGGTTGGTTCTACATTCTGTATGAAATC---------------TTC------GCC---GGTGAAGCCAGCAAGATTAACGCAGCA------CGT---GCTCCACCATCAGTG---CAA---TCG---GCA---TTT---AGT---TTAATG---CGTTGGATTGTGACCATT---------------------------------------------------------------GGATGG---------GCAATTTACCCGGTCATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YIDW--------LITVPLLMIEFYLILAA---I-AKVPG-GV------------FWR-LMIGTLVMLVGGYVGE---A------G--Y-----------A----------------------PV------WPA-FIVGMIGWFYILYEI-----F--A-GEASKINAA--R-APPSV-Q-S-A-F-S-LM-RWIVTI---------------------GW---AIYPVI------------------------------------------------------------------------------------------------ [III-Beta3-AAA024O16]_EU563282 [III-Beta3-AAA024O16] S6_ZeGerplAs_omSepT2007_env_samples_EU563282 gi|171770574|gb|EU563282| Uncultured microorganism clone S6 ZeGerplAs omSepT2007 putative proteorhodopsin gene, partial cds Uncultured microorganism clone S6 ZeGerplAs omSepT2007 putative proteorhodopsin gene, partial cds EU563282 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/SCGC_AAA024O16-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 SCGC_AAA024O16-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 01-sept-07 Zegerplas_at_0m_depth other freshwater 52.13 4.68 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na AGATATATAGACTGGCTGATCACTGTGCCGCTGTTGATGATCGAGTTCTACCTGATTTTGGCAGCAATCGCCAAAGTACCAGGCGGTGTGTTCTGGCGCCTAATGATCGGTACTCTGGTCATGTTGGTTGGCGGTTATGTTGGCGAAGCAGGCTATGCACCTGTCTGGCCAGCTTTCATCGTTGGCATGCTGGGTTGGTTCTACATCCTGTATGAAATCTTCGCTGGTGAAGCTAGCAAGATCAACGCTGCAAGCGCACCACCATCAGTGCAATCCGCGTTTAGCTTGATGCGTTGGATTGTCACAATCGGTTGGGCAATCTATCCA RYIDWLITVPLLMIEFYLILAAIAKVPGGVFWRLMIGTLVMLVGGYVGEAGYAPVWPAFIVGMLGWFYILYEIFAGEASKINAASAPPSVQSAFSLMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATAGACTGG------------------------CTGATCACTGTGCCGCTGTTGATGATCGAGTTCTACCTGATTTTGGCAGCA---------ATC---GCCAAAGTACCAGGC---GGTGTG------------------------------------TTCTGGCGC---CTAATGATCGGTACTCTGGTCATGTTGGTTGGCGGTTATGTTGGCGAA---------GCA------------------GGC------TAT---------------------------------GCA------------------------------------------------------------------CCTGTC------------------TGGCCAGCT---TTCATCGTTGGCATGCTGGGTTGGTTCTACATCCTGTATGAAATC---------------TTC------GCT---GGTGAAGCTAGCAAGATCAACGCTGCA------AGC---GCACCACCATCAGTG---CAA---TCC---GCG---TTT---AGC---TTGATG---CGTTGGATTGTCACAATC---------------------------------------------------------------GGTTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMIEFYLILAA---I-AKVPG-GV------------FWR-LMIGTLVMLVGGYVGE---A------G--Y-----------A----------------------PV------WPA-FIVGMLGWFYILYEI-----F--A-GEASKINAA--S-APPSV-Q-S-A-F-S-LM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Beta3-AAA024O16]_EU563283 [III-Beta3-AAA024O16] S8_WesTein_env_samples_EU563283 gi|171770576|gb|EU563283| Uncultured microorganism clone S8 WesTein putative proteorhodopsin gene, partial cds Uncultured microorganism clone S8 WesTein putative proteorhodopsin gene, partial cds EU563283 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/SCGC_AAA024O16-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 SCGC_AAA024O16-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 01-sept-07 Westeinderplassen_at_0m_depth other freshwater 52.23 4.7 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na AGTTATATAGATTGGCTGATCACTGTGCCGCTGTTGATGATCGAGTTCTACCTGATTTTGGCAGCAATCGCCAAAGTACCAGGCGGTGTGTTCTGGCGCCTAATGATCGGTACTCTGGTCATGTTGGTTGGCGGTTATGTTGGCGAAGCAGGCTATGCACCTGTCTGGCCAGCTTTCATCGTTGGCATGCTGGGTTGGTTCTACATCCTGTATGAAATCTTCGCTGGTGAAGCTAGCAAGATCAACGCTGCAAGCGAACCACCATCAGTGCAATCCGCGTTTAGCTTGATGCGTTGGATTGTCACAATCGGATGGGCAATTTATCCA SYIDWLITVPLLMIEFYLILAAIAKVPGGVFWRLMIGTLVMLVGGYVGEAGYAPVWPAFIVGMLGWFYILYEIFAGEASKINAASEPPSVQSAFSLMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTTATATAGATTGG------------------------CTGATCACTGTGCCGCTGTTGATGATCGAGTTCTACCTGATTTTGGCAGCA---------ATC---GCCAAAGTACCAGGC---GGTGTG------------------------------------TTCTGGCGC---CTAATGATCGGTACTCTGGTCATGTTGGTTGGCGGTTATGTTGGCGAA---------GCA------------------GGC------TAT---------------------------------GCA------------------------------------------------------------------CCTGTC------------------TGGCCAGCT---TTCATCGTTGGCATGCTGGGTTGGTTCTACATCCTGTATGAAATC---------------TTC------GCT---GGTGAAGCTAGCAAGATCAACGCTGCA------AGC---GAACCACCATCAGTG---CAA---TCC---GCG---TTT---AGC---TTGATG---CGTTGGATTGTCACAATC---------------------------------------------------------------GGATGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMIEFYLILAA---I-AKVPG-GV------------FWR-LMIGTLVMLVGGYVGE---A------G--Y-----------A----------------------PV------WPA-FIVGMLGWFYILYEI-----F--A-GEASKINAA--S-EPPSV-Q-S-A-F-S-LM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Beta3-AAA024O16]_EU563281 [III-Beta3-AAA024O16] S8ID_WesTein_env_samples_EU563281 gi|171770572|gb|EU563281| Uncultured microorganism clone S8ID WesTein putative proteorhodopsin gene, partial cds Uncultured microorganism clone S8ID WesTein putative proteorhodopsin gene, partial cds EU563281 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/SCGC_AAA024O16-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 SCGC_AAA024O16-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 01-sept-07 Westeinderplassen_at_0m_depth other freshwater 52.23 4.7 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na AGTTATATTGATTGGCTGATCACTGTGCCGCTGTTGATGATCGAGTTCTACCTGATTTTGGCAGCAATCGCCAAAGTACCAGGCGGTGTGTTCTGGCGCCTAATGATCGGTACTCTGGTCATGTTGGTTGGCGGTTATGTTGGCGAAGCAGGCTATGCACCTGTCTGGCCAGCTTTCATCGTTGGCATGCTGGGTTGGTTCTACATCCTGTATGAAATCTTCGCTGGTGAAGCTAGCAAGATCAACGCTGCAAGCGCACCACCATCAGTGCAATCCGCGTTTAGCTTGATGCGTTGGATTGTCACAATCGGGTGGGCCATTTATCCA SYIDWLITVPLLMIEFYLILAAIAKVPGGVFWRLMIGTLVMLVGGYVGEAGYAPVWPAFIVGMLGWFYILYEIFAGEASKINAASAPPSVQSAFSLMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTTATATTGATTGG------------------------CTGATCACTGTGCCGCTGTTGATGATCGAGTTCTACCTGATTTTGGCAGCA---------ATC---GCCAAAGTACCAGGC---GGTGTG------------------------------------TTCTGGCGC---CTAATGATCGGTACTCTGGTCATGTTGGTTGGCGGTTATGTTGGCGAA---------GCA------------------GGC------TAT---------------------------------GCA------------------------------------------------------------------CCTGTC------------------TGGCCAGCT---TTCATCGTTGGCATGCTGGGTTGGTTCTACATCCTGTATGAAATC---------------TTC------GCT---GGTGAAGCTAGCAAGATCAACGCTGCA------AGC---GCACCACCATCAGTG---CAA---TCC---GCG---TTT---AGC---TTGATG---CGTTGGATTGTCACAATC---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMIEFYLILAA---I-AKVPG-GV------------FWR-LMIGTLVMLVGGYVGE---A------G--Y-----------A----------------------PV------WPA-FIVGMLGWFYILYEI-----F--A-GEASKINAA--S-APPSV-Q-S-A-F-S-LM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Beta3-AAA024O16]_EU563316 [III-Beta3-AAA024O16] Kin_12m_May07C_env_samples_EU563316 gi|171770642|gb|EU563316| Uncultured microorganism clone Kin 12m May07C putative proteorhodopsin gene, partial cds Uncultured microorganism clone Kin 12m May07C putative proteorhodopsin gene, partial cds EU563316 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/SCGC_AAA024O16-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 SCGC_AAA024O16-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 May2007 Lake_Kinneret_at_12m_depth other freshwater 32.08 35.07 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na CGCTATATTGATTGGCTGATTACCGTGCCGCTGCTGATGATTGAATTTTATCTGATTCTGGCGGCGATTGCGAAAGTGCCGGTGGGCGTGTTTTGGCGCCTGATGATTGGCACCCTGGTGATGCTGGTGGGCGGCTATGCGGGCGAAGCGGGCTATCTGAGCGTGATGCCGGCGTTTATTATTGGCATGGTGGGCTGGTTTTATATTCTGTGGGAAATTTTTGCGGGCGAAGCGAGCAAAATTAACGCGGCGCAGGCGCCGAAAAACGTGCAGAGCGCGTTTAGCCTGATGCGCTGGATTGTGACCATTGGCTGGGCGATTTATCCG RYIDWLITVPLLMIEFYLILAAIAKVPVGVFWRLMIGTLVMLVGGYAGEAGYLSVMPAFIIGMVGWFYILWEIFAGEASKINAAQAPKNVQSAFSLMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTATATTGATTGG------------------------CTGATTACCGTGCCGCTGCTGATGATTGAATTTTATCTGATTCTGGCGGCG---------ATT---GCGAAAGTGCCGGTG---GGCGTG------------------------------------TTTTGGCGC---CTGATGATTGGCACCCTGGTGATGCTGGTGGGCGGCTATGCGGGCGAA---------GCG------------------GGC------TAT---------------------------------CTG------------------------------------------------------------------AGCGTG------------------ATGCCGGCG---TTTATTATTGGCATGGTGGGCTGGTTTTATATTCTGTGGGAAATT---------------TTT------GCG---GGCGAAGCGAGCAAAATTAACGCGGCG------CAG---GCGCCGAAAAACGTG---CAG---AGC---GCG---TTT---AGC---CTGATG---CGCTGGATTGTGACCATT---------------------------------------------------------------GGCTGG---------GCGATTTATCCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMIEFYLILAA---I-AKVPV-GV------------FWR-LMIGTLVMLVGGYAGE---A------G--Y-----------L----------------------SV------MPA-FIIGMVGWFYILWEI-----F--A-GEASKINAA--Q-APKNV-Q-S-A-F-S-LM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Beta3-AAA024O16]_EU563323 [III-Beta3-AAA024O16] Kin_6m_Jan07B_env_samples_EU563323 gi|171770656|gb|EU563323| Uncultured microorganism clone Kin 6m Jan07B putative proteorhodopsin gene, partial cds Uncultured microorganism clone Kin 6m Jan07B putative proteorhodopsin gene, partial cds EU563323 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/SCGC_AAA024O16-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 SCGC_AAA024O16-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 01-janv-07 Lake_Kinneret_at_6m_depth other freshwater 32.08 35.07 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na CGCTATATTGATTGGCTGATTACCGTGCCGCTGCTGATGATTGAATTTTATCTGATTCTGGCGGCGATTGCGAAAGTGCCGGTGGGCGTGTTTTGGCGCCTGATGATTGGCACCCTGGTGATGCTGGTGGGCGGCTATGCGGGCGAAGCGGGCTATCTGAGCGTGATGCCGGCGTTTATTATTGGCATGGTGGGCTGGTTTTATATTCTGTGGGAAATTTTTGCGGGCGAAGCGAGCAAAATTAACGCGGCGCAGGCGCCGAAAAACGTGCAGAGCGCGTTTAGCCTGATGCGCTGGATTGTGACCATTGGCTGGGCGATTTATCCG RYIDWLITVPLLMIEFYLILAAIAKVPVGVFWRLMIGTLVMLVGGYAGEAGYLSVMPAFIIGMVGWFYILWEIFAGEASKINAAQAPKNVQSAFSLMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTATATTGATTGG------------------------CTGATTACCGTGCCGCTGCTGATGATTGAATTTTATCTGATTCTGGCGGCG---------ATT---GCGAAAGTGCCGGTG---GGCGTG------------------------------------TTTTGGCGC---CTGATGATTGGCACCCTGGTGATGCTGGTGGGCGGCTATGCGGGCGAA---------GCG------------------GGC------TAT---------------------------------CTG------------------------------------------------------------------AGCGTG------------------ATGCCGGCG---TTTATTATTGGCATGGTGGGCTGGTTTTATATTCTGTGGGAAATT---------------TTT------GCG---GGCGAAGCGAGCAAAATTAACGCGGCG------CAG---GCGCCGAAAAACGTG---CAG---AGC---GCG---TTT---AGC---CTGATG---CGCTGGATTGTGACCATT---------------------------------------------------------------GGCTGG---------GCGATTTATCCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMIEFYLILAA---I-AKVPV-GV------------FWR-LMIGTLVMLVGGYAGE---A------G--Y-----------L----------------------SV------MPA-FIIGMVGWFYILWEI-----F--A-GEASKINAA--Q-APKNV-Q-S-A-F-S-LM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Beta3-AAA024O16]_EU563333 [III-Beta3-AAA024O16] G_see_7B_env_samples_EU563333 gi|171770676|gb|EU563333| Uncultured microorganism clone G see 7B putative proteorhodopsin gene, partial cds Uncultured microorganism clone G see 7B putative proteorhodopsin gene, partial cds EU563333 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/SCGC_AAA024O16-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 SCGC_AAA024O16-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 01-juil-06 Grosser_Ploner_See_at_1m_depth other freshwater 54.15 10.42 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na TGCGCGCAGTTTATTAGCTATATTGATTGGCTGATTACCGTGCCGCTGCTGATGATTGAATTTTATCTGATTCTGGCGGCGATTGCGAAAGTGCCGGGCGGCGTGTTTTGGCGCCTGATGATTGGCACCCTGGTGATGCTGGTGGGCGGCTATGTGGGCGAAGCGGGCTATGCGCCGGTGTGGCCGGCGTTTATTGTGGGCATGCTGGGCTGGTTTTATATTCTGTATGAAATTTTTGCGGGCGAAGCGAGCAAAATTAACGCGGCGAGCGCGCCGCCGAGCGTGCAGAGCGCGTTTAGCCTGATGCGCTGGATTGTGACCATTGGCTGGGCGGTGTATCCGAGCCTGCGC CAQFISYIDWLITVPLLMIEFYLILAAIAKVPGGVFWRLMIGTLVMLVGGYVGEAGYAPVWPAFIVGMLGWFYILYEIFAGEASKINAASAPPSVQSAFSLMRWIVTIGWAVYPSLR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCGCGCAGTTTATTAGCTATATTGATTGG------------------------CTGATTACCGTGCCGCTGCTGATGATTGAATTTTATCTGATTCTGGCGGCG---------ATT---GCGAAAGTGCCGGGC---GGCGTG------------------------------------TTTTGGCGC---CTGATGATTGGCACCCTGGTGATGCTGGTGGGCGGCTATGTGGGCGAA---------GCG------------------GGC------TAT---------------------------------GCG------------------------------------------------------------------CCGGTG------------------TGGCCGGCG---TTTATTGTGGGCATGCTGGGCTGGTTTTATATTCTGTATGAAATT---------------TTT------GCG---GGCGAAGCGAGCAAAATTAACGCGGCG------AGC---GCGCCGCCGAGCGTG---CAG---AGC---GCG---TTT---AGC---CTGATG---CGCTGGATTGTGACCATT---------------------------------------------------------------GGCTGG---------GCGGTGTATCCGAGCCTGCGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAQFISYIDW--------LITVPLLMIEFYLILAA---I-AKVPG-GV------------FWR-LMIGTLVMLVGGYVGE---A------G--Y-----------A----------------------PV------WPA-FIVGMLGWFYILYEI-----F--A-GEASKINAA--S-APPSV-Q-S-A-F-S-LM-RWIVTI---------------------GW---AVYPSLR----------------------------------------------------------------------------------------------- [III-Beta3-AAA024O16]_JN648733 [III-Beta3-AAA024O16] B10_Mayo2011_B9M13F_A5_MIX1_300_98_150_env_samples_JN648733 gi|356818572|gb|JN648733| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648733 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/SCGC_AAA024O16-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 SCGC_AAA024O16-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATTACCGTTCCGCTCCTGATGATTGAGTTCTACCTGATTTTGTCAGCGATCGCAAAAGTACCAGCCGGTATTTTCTGGCGCTTGATGATTGGTACTCTGGTCATGCTCGTAGGCGGCTATGTCGGAGAAGCGGGCTATGCACCTGTCTTACCAGCATTCATCGTTGGTATGATCGGTTGGGCATACATCTTGTACGAAATCTTCGCCGGCGAAGCCAGCAAGATCAGTGCTTCGAGCGCGCCACAATCGGTTCAGTCCGCTTTCGGCACAATGCGCTGGATCGTCACAATC ITVPLLMIEFYLILSAIAKVPAGIFWRLMIGTLVMLVGGYVGEAGYAPVLPAFIVGMIGWAYILYEIFAGEASKISASSAPQSVQSAFGTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTACCGTTCCGCTCCTGATGATTGAGTTCTACCTGATTTTGTCAGCG---------ATC---GCAAAAGTACCAGCC---GGTATT------------------------------------TTCTGGCGC---TTGATGATTGGTACTCTGGTCATGCTCGTAGGCGGCTATGTCGGAGAA---------GCG------------------GGC------TAT---------------------------------GCA------------------------------------------------------------------CCTGTC------------------TTACCAGCA---TTCATCGTTGGTATGATCGGTTGGGCATACATCTTGTACGAAATC---------------TTC------GCC---GGCGAAGCCAGCAAGATCAGTGCTTCG------AGC---GCGCCACAATCGGTT---CAG---TCC---GCT---TTC---GGC---ACAATG---CGCTGGATCGTCACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMIEFYLILSA---I-AKVPA-GI------------FWR-LMIGTLVMLVGGYVGE---A------G--Y-----------A----------------------PV------LPA-FIVGMIGWAYILYEI-----F--A-GEASKISAS--S-APQSV-Q-S-A-F-G-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-AAA024O16]_JN648734 [III-Beta3-AAA024O16] C6_Mayo2011_C5M13F_A5_MIX1_300_98_150_env_samples_JN648734 gi|356818574|gb|JN648734| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648734 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/SCGC_AAA024O16-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 SCGC_AAA024O16-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na CTGATTACCGTTCCGCTCCTGATGATTGAGTTCTACCTGATTTTGTCAGCGATCGCAAAAGTACCAGCCGGTATTTTCTGGCGCTTGATGATTGGTACTCTGGTCATGCTCGTAGGCGGCTATGTCGGAGAAGCGGGCTATGCACCTGTCTTACCAGCATTCATCGTTGGTATGATCGGTTGGGCATACATCTTGTACGAAATCTTCGCCGGCGAAGCCAGCAAGATCAGTGCTTCGAGCGCGCCACAATCGGTTCAGTCCGCTTTCGGCACAATGCGCTGGATCGTCACAATC LITVPLLMIEFYLILSAIAKVPAGIFWRLMIGTLVMLVGGYVGEAGYAPVLPAFIVGMIGWAYILYEIFAGEASKISASSAPQSVQSAFGTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACCGTTCCGCTCCTGATGATTGAGTTCTACCTGATTTTGTCAGCG---------ATC---GCAAAAGTACCAGCC---GGTATT------------------------------------TTCTGGCGC---TTGATGATTGGTACTCTGGTCATGCTCGTAGGCGGCTATGTCGGAGAA---------GCG------------------GGC------TAT---------------------------------GCA------------------------------------------------------------------CCTGTC------------------TTACCAGCA---TTCATCGTTGGTATGATCGGTTGGGCATACATCTTGTACGAAATC---------------TTC------GCC---GGCGAAGCCAGCAAGATCAGTGCTTCG------AGC---GCGCCACAATCGGTT---CAG---TCC---GCT---TTC---GGC---ACAATG---CGCTGGATCGTCACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILSA---I-AKVPA-GI------------FWR-LMIGTLVMLVGGYVGE---A------G--Y-----------A----------------------PV------LPA-FIVGMIGWAYILYEI-----F--A-GEASKISAS--S-APQSV-Q-S-A-F-G-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-AAA024O16]_JN648761 [III-Beta3-AAA024O16] C3_Mayo2011_C2M13F_A5_MIX1_300_98_150_env_samples_JN648761 gi|356818628|gb|JN648761| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648761 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/SCGC_AAA024O16-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 SCGC_AAA024O16-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATTACCGTTCCGCTCCTGATGATTGAGTTCTACCTGATTTTGTCAGCGATCGCAAAAGTACCAGCCGGTATTTTCTGGCGCTTGATGATTGGTACTCTGGTCATGCTCGTAGGCGGCTATGTCGGAGAAGCGGGCTATGCACCTGTCTTACCAGCATTCATCGTTGGTATGATCGGTTGGGCATACATCTTGTACGAAATCTTCGCCGGCGAAGCCAGCAAGATCAGTGCTTCGAGCGCGCCACAATCGGTTCAGTCCGCTTTCGGCACAATGCGCTGGATCGTCACAATC ITVPLLMIEFYLILSAIAKVPAGIFWRLMIGTLVMLVGGYVGEAGYAPVLPAFIVGMIGWAYILYEIFAGEASKISASSAPQSVQSAFGTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTACCGTTCCGCTCCTGATGATTGAGTTCTACCTGATTTTGTCAGCG---------ATC---GCAAAAGTACCAGCC---GGTATT------------------------------------TTCTGGCGC---TTGATGATTGGTACTCTGGTCATGCTCGTAGGCGGCTATGTCGGAGAA---------GCG------------------GGC------TAT---------------------------------GCA------------------------------------------------------------------CCTGTC------------------TTACCAGCA---TTCATCGTTGGTATGATCGGTTGGGCATACATCTTGTACGAAATC---------------TTC------GCC---GGCGAAGCCAGCAAGATCAGTGCTTCG------AGC---GCGCCACAATCGGTT---CAG---TCC---GCT---TTC---GGC---ACAATG---CGCTGGATCGTCACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMIEFYLILSA---I-AKVPA-GI------------FWR-LMIGTLVMLVGGYVGE---A------G--Y-----------A----------------------PV------LPA-FIVGMIGWAYILYEI-----F--A-GEASKISAS--S-APQSV-Q-S-A-F-G-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-AAA024O16]_JN648732 [III-Beta3-AAA024O16] B7_Mayo2011_B6M13F_A5_MIX1_300_98_150_env_samples_JN648732 gi|356818570|gb|JN648732| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648732 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/SCGC_AAA024O16-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 SCGC_AAA024O16-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATTACCGTTCCGCTCCTGATGATTGAGTTCTACCTGATTTTGTCAGCGATCGCAAAAGTACCAGCCGGTATTTTCTGGCGCTTGATGATTGGTACTCTGGTCATGCTCGTAGGCGGCTATGTCGGAGAAGCGGGCTATGCACCTGTCTTACCAGCATTCATCGTTGGCATGATCGGTTGGGCATACATCTTGTACGAAATCTTCGCCGGCGAAGCCAGCAAGATCAGTGCTTCGAGCGCGCCACAATCGGTTCAGTCCGCTTTCGGCACAATGCGCTGGATCGTCACAATC ITVPLLMIEFYLILSAIAKVPAGIFWRLMIGTLVMLVGGYVGEAGYAPVLPAFIVGMIGWAYILYEIFAGEASKISASSAPQSVQSAFGTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTACCGTTCCGCTCCTGATGATTGAGTTCTACCTGATTTTGTCAGCG---------ATC---GCAAAAGTACCAGCC---GGTATT------------------------------------TTCTGGCGC---TTGATGATTGGTACTCTGGTCATGCTCGTAGGCGGCTATGTCGGAGAA---------GCG------------------GGC------TAT---------------------------------GCA------------------------------------------------------------------CCTGTC------------------TTACCAGCA---TTCATCGTTGGCATGATCGGTTGGGCATACATCTTGTACGAAATC---------------TTC------GCC---GGCGAAGCCAGCAAGATCAGTGCTTCG------AGC---GCGCCACAATCGGTT---CAG---TCC---GCT---TTC---GGC---ACAATG---CGCTGGATCGTCACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMIEFYLILSA---I-AKVPA-GI------------FWR-LMIGTLVMLVGGYVGE---A------G--Y-----------A----------------------PV------LPA-FIVGMIGWAYILYEI-----F--A-GEASKISAS--S-APQSV-Q-S-A-F-G-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-AAA024O16]_JN648740 [III-Beta3-AAA024O16] E12_Mayo2011_E12M13F_A5_MIX1_300_98_5198_env_samples_JN648740 gi|356818586|gb|JN648740| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648740 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/SCGC_AAA024O16-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 SCGC_AAA024O16-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATTACCGTTCCGCTCCTGATGATTGAGTTCTACCTGATTTTGTCAGCGATCGCAAAAGTACCAGCCGGTATTTTCTGGCGCTTGATGATTGGTACTCTGGTCATGCTCGTAGGCGGCTATGTCGGAGAAGCGGGCTATGCACCTGTCTTACCAGCATTCATCGTTGGCATGATCGGTTGGGCATACATCTTGTACGAAATCTTCGCCGGCGAAGCCAGCAAGATCAGTGCTTCGAGCGCGCCACAATCGGTTCAGTCCGCTTTCGGCACAATGCGCTGGATCGTCACA ITVPLLMIEFYLILSAIAKVPAGIFWRLMIGTLVMLVGGYVGEAGYAPVLPAFIVGMIGWAYILYEIFAGEASKISASSAPQSVQSAFGTMRWIVT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTACCGTTCCGCTCCTGATGATTGAGTTCTACCTGATTTTGTCAGCG---------ATC---GCAAAAGTACCAGCC---GGTATT------------------------------------TTCTGGCGC---TTGATGATTGGTACTCTGGTCATGCTCGTAGGCGGCTATGTCGGAGAA---------GCG------------------GGC------TAT---------------------------------GCA------------------------------------------------------------------CCTGTC------------------TTACCAGCA---TTCATCGTTGGCATGATCGGTTGGGCATACATCTTGTACGAAATC---------------TTC------GCC---GGCGAAGCCAGCAAGATCAGTGCTTCG------AGC---GCGCCACAATCGGTT---CAG---TCC---GCT---TTC---GGC---ACAATG---CGCTGGATCGTCACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMIEFYLILSA---I-AKVPA-GI------------FWR-LMIGTLVMLVGGYVGE---A------G--Y-----------A----------------------PV------LPA-FIVGMIGWAYILYEI-----F--A-GEASKISAS--S-APQSV-Q-S-A-F-G-TM-RWIVT--------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-AAA024O16]_JN648731 [III-Beta3-AAA024O16] B3_Mayo2011_B3M13F_A5_MIX1_300_98_150_env_samples_JN648731 gi|356818568|gb|JN648731| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648731 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/SCGC_AAA024O16-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 SCGC_AAA024O16-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATTACCGTTCCGCTCCTGATGATTGAGTTCTACCTGATTTTGTCAGCGATCGCAAAAGTACCAGCCGGTATTTTCTGGCGCTTGATGATTGGTACTCTGGTCATGCTCGTAGGCGGCTATGTCGGAGAAGCGGGCTATGCACCTGTCTTACCAGCATTCATCGTTGGTATGATCGGTTGGGCATACATCTTGTACGAAATCTTCGCCGGCGAAGCCAGCAAGATCAGTGCTTCGAGCGCGCCACAATCGGTTCAGTCCGCTTTCGGCACAATGCGCTGGATCGTCACAATC ITVPLLMIEFYLILSAIAKVPAGIFWRLMIGTLVMLVGGYVGEAGYAPVLPAFIVGMIGWAYILYEIFAGEASKISASSAPQSVQSAFGTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTACCGTTCCGCTCCTGATGATTGAGTTCTACCTGATTTTGTCAGCG---------ATC---GCAAAAGTACCAGCC---GGTATT------------------------------------TTCTGGCGC---TTGATGATTGGTACTCTGGTCATGCTCGTAGGCGGCTATGTCGGAGAA---------GCG------------------GGC------TAT---------------------------------GCA------------------------------------------------------------------CCTGTC------------------TTACCAGCA---TTCATCGTTGGTATGATCGGTTGGGCATACATCTTGTACGAAATC---------------TTC------GCC---GGCGAAGCCAGCAAGATCAGTGCTTCG------AGC---GCGCCACAATCGGTT---CAG---TCC---GCT---TTC---GGC---ACAATG---CGCTGGATCGTCACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMIEFYLILSA---I-AKVPA-GI------------FWR-LMIGTLVMLVGGYVGE---A------G--Y-----------A----------------------PV------LPA-FIVGMIGWAYILYEI-----F--A-GEASKISAS--S-APQSV-Q-S-A-F-G-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-AAA024O16]_JN648736 [III-Beta3-AAA024O16] E8_Mayo2011_E8M13F_A5_MIX1_300_98_5198_env_samples_JN648736 gi|356818578|gb|JN648736| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648736 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/SCGC_AAA024O16-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 SCGC_AAA024O16-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATTACCGTTCCGCTCCTGATGATTGAGTTCTACCTGATTTTGTCAGCGATCGCAAAAGTACCAGCCGGTATTTTCTGGCGCTTGATGATTGGTACTCTGGTCATGCTCGTAGGCGGCTATGTCGGAGAAGCGGGCTATGCACCTGTCTTACCAGCATTCATCGTTGGTATGATCGGTTGGGCATACATCTTGTACGAAATCTTCGCCGGCGAAGCCAGCAAGATCAGTGCTTCGAGCGCGCCACAATCGGTTCAGTCCGCTTTCGGCACAATGCGCTGGATCGTCACA ITVPLLMIEFYLILSAIAKVPAGIFWRLMIGTLVMLVGGYVGEAGYAPVLPAFIVGMIGWAYILYEIFAGEASKISASSAPQSVQSAFGTMRWIVT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTACCGTTCCGCTCCTGATGATTGAGTTCTACCTGATTTTGTCAGCG---------ATC---GCAAAAGTACCAGCC---GGTATT------------------------------------TTCTGGCGC---TTGATGATTGGTACTCTGGTCATGCTCGTAGGCGGCTATGTCGGAGAA---------GCG------------------GGC------TAT---------------------------------GCA------------------------------------------------------------------CCTGTC------------------TTACCAGCA---TTCATCGTTGGTATGATCGGTTGGGCATACATCTTGTACGAAATC---------------TTC------GCC---GGCGAAGCCAGCAAGATCAGTGCTTCG------AGC---GCGCCACAATCGGTT---CAG---TCC---GCT---TTC---GGC---ACAATG---CGCTGGATCGTCACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMIEFYLILSA---I-AKVPA-GI------------FWR-LMIGTLVMLVGGYVGE---A------G--Y-----------A----------------------PV------LPA-FIVGMIGWAYILYEI-----F--A-GEASKISAS--S-APQSV-Q-S-A-F-G-TM-RWIVT--------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-AAA024O16]_JN648741 [III-Beta3-AAA024O16] G3_Mayo2011_G3M13F_A5_MIX1_300_98_5198_env_samples_JN648741 gi|356818588|gb|JN648741| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648741 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/SCGC_AAA024O16-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 SCGC_AAA024O16-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na ATTACCGTTCCGCTCCTGATGATTGAGTTCTACCTGATTTTGTCAGCGATCGCAAAAGTACCAGCCGGTATTTTCTGGCGCTTGATGATTGGTACTCTGGTCATGCTCGTAGGCGGCTATGTCGGAGAAGCGGGCTATGCACCTGTCTTACCAGCATTCATCGTTGGTATGATCGGTTGGGCATACATCTTGTACGAAATCTTCGCCGGCGAAGCCAGCAAGATCAGTGCTTCGAGCGCGCCACAATCGGTTCAGTCCGCTTTCGGCACAATGCGCTGGATCGTCACA ITVPLLMIEFYLILSAIAKVPAGIFWRLMIGTLVMLVGGYVGEAGYAPVLPAFIVGMIGWAYILYEIFAGEASKISASSAPQSVQSAFGTMRWIVT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTACCGTTCCGCTCCTGATGATTGAGTTCTACCTGATTTTGTCAGCG---------ATC---GCAAAAGTACCAGCC---GGTATT------------------------------------TTCTGGCGC---TTGATGATTGGTACTCTGGTCATGCTCGTAGGCGGCTATGTCGGAGAA---------GCG------------------GGC------TAT---------------------------------GCA------------------------------------------------------------------CCTGTC------------------TTACCAGCA---TTCATCGTTGGTATGATCGGTTGGGCATACATCTTGTACGAAATC---------------TTC------GCC---GGCGAAGCCAGCAAGATCAGTGCTTCG------AGC---GCGCCACAATCGGTT---CAG---TCC---GCT---TTC---GGC---ACAATG---CGCTGGATCGTCACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMIEFYLILSA---I-AKVPA-GI------------FWR-LMIGTLVMLVGGYVGE---A------G--Y-----------A----------------------PV------LPA-FIVGMIGWAYILYEI-----F--A-GEASKISAS--S-APQSV-Q-S-A-F-G-TM-RWIVT--------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-AAA024O16]_JN648744 [III-Beta3-AAA024O16] A3_Mayo2011_A3M13F_A5_MIX1_300_98_150_env_samples_JN648744 gi|356818594|gb|JN648744| Uncultured bacterium putative proteorhodopsin gene, partial cds Uncultured bacterium putative proteorhodopsin gene, partial cds JN648744 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/SCGC_AAA024O16-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 SCGC_AAA024O16-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-12 10Apr2008 acidic_hot_springs_in_high_andean_forest_[sup3400m] other freshwater 4 -75 Proteorhodopsinlike genes present in thermoacidophilic highmountain microbial communities Bohorquez,L.C., RuizPerez,C.A. and Zambrano,M.M. Appl. Environ. Microbiol. 78 (21), 78137817 (2012) 22941077 #na CTGATTACCGTTCCGCTCCTGATGATTGAGTTCTACCTGATTTTGTCAGCGATCGCAAAAGTGCCAGCCGGTATTTTCTGGCGCTTGATGATTGGTACTCTGGTCATGCTCGTAGGCGGCTATGTCGGAGAAGCGGGCTATGCACCTGTCTTACCAGCATTCATCGTTGGTATGATCGGTTGGGCATACATCTTGTACGAAATCTTCGCCGGCGAAGCCAGCAAGATCAGTGCTTCGAGCGCGCCACAATCGGTTCAGTCCGCTTTCGGCACAATGCGCTGGATCGTCACAATC LITVPLLMIEFYLILSAIAKVPAGIFWRLMIGTLVMLVGGYVGEAGYAPVLPAFIVGMIGWAYILYEIFAGEASKISASSAPQSVQSAFGTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACCGTTCCGCTCCTGATGATTGAGTTCTACCTGATTTTGTCAGCG---------ATC---GCAAAAGTGCCAGCC---GGTATT------------------------------------TTCTGGCGC---TTGATGATTGGTACTCTGGTCATGCTCGTAGGCGGCTATGTCGGAGAA---------GCG------------------GGC------TAT---------------------------------GCA------------------------------------------------------------------CCTGTC------------------TTACCAGCA---TTCATCGTTGGTATGATCGGTTGGGCATACATCTTGTACGAAATC---------------TTC------GCC---GGCGAAGCCAGCAAGATCAGTGCTTCG------AGC---GCGCCACAATCGGTT---CAG---TCC---GCT---TTC---GGC---ACAATG---CGCTGGATCGTCACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILSA---I-AKVPA-GI------------FWR-LMIGTLVMLVGGYVGE---A------G--Y-----------A----------------------PV------LPA-FIVGMIGWAYILYEI-----F--A-GEASKISAS--S-APQSV-Q-S-A-F-G-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-AAA024O16]_EU563295 [III-Beta3-AAA024O16] Fos_32_ID_env_samples_EU563295 gi|171770600|gb|EU563295| Uncultured microorganism clone Fos 32 ID putative proteorhodopsin gene, partial cds Uncultured microorganism clone Fos 32 ID putative proteorhodopsin gene, partial cds EU563295 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/SCGC_AAA024O16-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 SCGC_AAA024O16-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 2003 Lake_Kinneret other freshwater 32.08 35.07 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na AGTTACATCGATTGGCTTATTACAGTACCGTTGCTGATGATTGAGTTTTACTTAATCTTAGCTGCAATTGCAAAAGTGCCAGTTGGCGTATTTTGGCGCTTAATGATTGGTACTTTAGTGATGCTTGTTGGCGGCTATGCAGGCGAAGCTGGTTACCTATCTGTAATGCCAGCATTCATTATCGGCATGGTGGGTTGGTTCTATATCCTTTGGGAAATTTTTGCTGGCGAAGCAAGCAAAATCAATGCTGCTCAAGCTCCAAAAAATGTTCAATCAGCATTTAGTTTAATGCGTTGGATTGTGACTATTGGATGGGCAATCTATCCC SYIDWLITVPLLMIEFYLILAAIAKVPVGVFWRLMIGTLVMLVGGYAGEAGYLSVMPAFIIGMVGWFYILWEIFAGEASKINAAQAPKNVQSAFSLMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTTACATCGATTGG------------------------CTTATTACAGTACCGTTGCTGATGATTGAGTTTTACTTAATCTTAGCTGCA---------ATT---GCAAAAGTGCCAGTT---GGCGTA------------------------------------TTTTGGCGC---TTAATGATTGGTACTTTAGTGATGCTTGTTGGCGGCTATGCAGGCGAA---------GCT------------------GGT------TAC---------------------------------CTA------------------------------------------------------------------TCTGTA------------------ATGCCAGCA---TTCATTATCGGCATGGTGGGTTGGTTCTATATCCTTTGGGAAATT---------------TTT------GCT---GGCGAAGCAAGCAAAATCAATGCTGCT------CAA---GCTCCAAAAAATGTT---CAA---TCA---GCA---TTT---AGT---TTAATG---CGTTGGATTGTGACTATT---------------------------------------------------------------GGATGG---------GCAATCTATCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMIEFYLILAA---I-AKVPV-GV------------FWR-LMIGTLVMLVGGYAGE---A------G--Y-----------L----------------------SV------MPA-FIIGMVGWFYILWEI-----F--A-GEASKINAA--Q-APKNV-Q-S-A-F-S-LM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Beta3-AAA024O16]_JX863214 [III-Beta3-AAA024O16] MALINA_OTU67a_436_L_env_samples_JX863214 gi|425477378|gb|JX863214| Uncultured bacterium clone MALINA OTU67a 436 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU67a 436 L putative proteorhodopsin gene, partial cds JX863214 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/SCGC_AAA024O16-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 SCGC_AAA024O16-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 13Aug2009 0m_depth Arctic Ocean marine 69.25 -137.2 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTCATTACAGTGCCATTGCTCATGATTGAGTTTTACTTGATCCTTGCTGCAATTGCAAAAGTGCCAGTTGGCGTATTTTGGCGCCTAATGATTGGTACATTAGTCATGTTGGTTGGTGGCTATGCAGGTGAAGCAGGTTACCTTTCAGTAATGCCAGCATTCATTATCGGTATGTTGGGTTGGTTCTACATTCTTTGGGAAATTTTCGCTGGCGAAGCAAGCAAGATCAATGCTGGCCAAGCACCAAAAAATGTTCAATCTGCATTTAGTTTAATGCGTTGGATTGTAACAATT WLITVPLLMIEFYLILAAIAKVPVGVFWRLMIGTLVMLVGGYAGEAGYLSVMPAFIIGMLGWFYILWEIFAGEASKINAGQAPKNVQSAFSLMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTCATTACAGTGCCATTGCTCATGATTGAGTTTTACTTGATCCTTGCTGCA---------ATT---GCAAAAGTGCCAGTT---GGCGTA------------------------------------TTTTGGCGC---CTAATGATTGGTACATTAGTCATGTTGGTTGGTGGCTATGCAGGTGAA---------GCA------------------GGT------TAC---------------------------------CTT------------------------------------------------------------------TCAGTA------------------ATGCCAGCA---TTCATTATCGGTATGTTGGGTTGGTTCTACATTCTTTGGGAAATT---------------TTC------GCT---GGCGAAGCAAGCAAGATCAATGCTGGC------CAA---GCACCAAAAAATGTT---CAA---TCT---GCA---TTT---AGT---TTAATG---CGTTGGATTGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFYLILAA---I-AKVPV-GV------------FWR-LMIGTLVMLVGGYAGE---A------G--Y-----------L----------------------SV------MPA-FIIGMLGWFYILWEI-----F--A-GEASKINAG--Q-APKNV-Q-S-A-F-S-LM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-AAA024O16]_EU563307 [III-Beta3-AAA024O16] kin_6m_Jan07A_env_samples_EU563307 gi|171770624|gb|EU563307| Uncultured microorganism clone kin 6m Jan07A putative proteorhodopsin gene, partial cds Uncultured microorganism clone kin 6m Jan07A putative proteorhodopsin gene, partial cds EU563307 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/SCGC_AAA024O16-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 SCGC_AAA024O16-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 01-janv-07 Lake_Kinneret_at_6m_depth other freshwater 32.08 35.07 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na AGCTATATTGACTGGCTAATTACGGTGCCATTGTTAATGATTGAGTTTTACTTAATCTTAGCCGCCATCGCTAAAGTGCCAGTAGGCGTGTTCTGGCGTCTAATGATAGGTACCTTGGTCATGTTGGTTGGTGGTTATGCAGGTGAAGCAGGCTACATAGCCGTGATGCCAGCATTCATCATCGGTATGCTAGGTTGGTTCTACATTCTTTGGGAAATTTTTGCAGGCGAAGCCAGCAAAATTAACGCCGGTCAGGCACCAAAAAATGTGCAATCTGCATTTAGTTTGATGAGATGGATTGTGACCATTGGCTGGGCCATCTATCCA SYIDWLITVPLLMIEFYLILAAIAKVPVGVFWRLMIGTLVMLVGGYAGEAGYIAVMPAFIIGMLGWFYILWEIFAGEASKINAGQAPKNVQSAFSLMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGACTGG------------------------CTAATTACGGTGCCATTGTTAATGATTGAGTTTTACTTAATCTTAGCCGCC---------ATC---GCTAAAGTGCCAGTA---GGCGTG------------------------------------TTCTGGCGT---CTAATGATAGGTACCTTGGTCATGTTGGTTGGTGGTTATGCAGGTGAA---------GCA------------------GGC------TAC---------------------------------ATA------------------------------------------------------------------GCCGTG------------------ATGCCAGCA---TTCATCATCGGTATGCTAGGTTGGTTCTACATTCTTTGGGAAATT---------------TTT------GCA---GGCGAAGCCAGCAAAATTAACGCCGGT------CAG---GCACCAAAAAATGTG---CAA---TCT---GCA---TTT---AGT---TTGATG---AGATGGATTGTGACCATT---------------------------------------------------------------GGCTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMIEFYLILAA---I-AKVPV-GV------------FWR-LMIGTLVMLVGGYAGE---A------G--Y-----------I----------------------AV------MPA-FIIGMLGWFYILWEI-----F--A-GEASKINAG--Q-APKNV-Q-S-A-F-S-LM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Beta3-AAA024O16]_JX863185 [III-Beta3-AAA024O16] MALINA_OTU23_246_L_env_samples_JX863185 gi|425477320|gb|JX863185| Uncultured bacterium clone MALINA OTU23 246 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU23 246 L putative proteorhodopsin gene, partial cds JX863185 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/SCGC_AAA024O16-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 SCGC_AAA024O16-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 13Aug2009 0m_depth Arctic Ocean marine 69.25 -137.2 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGATTACCGTTCCCTTGTTAATGATCGAATTTTATTTGATCTTATCTGCAATCACCAAAGTGCCAGCAGGTATCTTCTGGCGCCTGTTGATTGGTACCATGGTGATGTTAGTTGGTGGTTGTTTGGGTGAAGCAGGCTATATGTCTGTCTGGCCAGCATTCATTATCGGTATGGTCGGTTGGGCTTACATTCTGTGGGAAATCTTTGGCGGTGAAGCTGGCAAGTTGAATGCCTCTTCGGCACCTCCTTCGGTTCAGTCAGCCTTCAATACGATGCGCTGGATTGTTACCATT WLITVPLLMIEFYLILSAITKVPAGIFWRLLIGTMVMLVGGCLGEAGYMSVWPAFIIGMVGWAYILWEIFGGEAGKLNASSAPPSVQSAFNTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATTACCGTTCCCTTGTTAATGATCGAATTTTATTTGATCTTATCTGCA---------ATC---ACCAAAGTGCCAGCA---GGTATC------------------------------------TTCTGGCGC---CTGTTGATTGGTACCATGGTGATGTTAGTTGGTGGTTGTTTGGGTGAA---------GCA------------------GGC------TAT---------------------------------ATG------------------------------------------------------------------TCTGTC------------------TGGCCAGCA---TTCATTATCGGTATGGTCGGTTGGGCTTACATTCTGTGGGAAATC---------------TTT------GGC---GGTGAAGCTGGCAAGTTGAATGCCTCT------TCG---GCACCTCCTTCGGTT---CAG---TCA---GCC---TTC---AAT---ACGATG---CGCTGGATTGTTACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFYLILSA---I-TKVPA-GI------------FWR-LLIGTMVMLVGGCLGE---A------G--Y-----------M----------------------SV------WPA-FIIGMVGWAYILWEI-----F--G-GEAGKLNAS--S-APPSV-Q-S-A-F-N-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-AAA024O16]_FJ545163 [III-Beta3-AAA024O16] clone_Superior_CD1_PR_E1_rhodopsin_gene_partial_cds_FJ545163 gi|224384001|gb|FJ545163| Uncultured microorganism clone Superior.CD1.PR.E1 putative rhodopsin gene, partial cds. Uncultured microorganism clone Superior.CD1.PR.E1 putative rhodopsin gene, partial cds. FJ545163 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/SCGC_AAA024O16-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 SCGC_AAA024O16-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juin-05 Lake Superior other freshwater 47.3 -91.67 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na ATTACCGTTCCCTTGTTAATGATCGAATTTTATTTGATCTTATCTGCAATCACCAAAGTGCCAGCAGGTATCTTCTGGCGCCTGTTGATTGGTACCATGGTGATGTTAGTTGGTGGTTATTTGGGTGAAGCAGGCTATATGTCTGTCTGGCCAGCATTCATTATCGGTATGGTCGGTTGGGCTTACATTCTGTGGGAAATCTTTGGCGGTGAAGCTGGCAAGTTGAATGCCTCTTCGGCACCTCCTTCGGTTCAGTCAGCCTTCAATACGATGCGCTGGATTGTTACCATT ITVPLLMIEFYLILSAITKVPAGIFWRLLIGTMVMLVGGYLGEAGYMSVWPAFIIGMVGWAYILWEIFGGEAGKLNASSAPPSVQSAFNTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTACCGTTCCCTTGTTAATGATCGAATTTTATTTGATCTTATCTGCA---------ATC---ACCAAAGTGCCAGCA---GGTATC------------------------------------TTCTGGCGC---CTGTTGATTGGTACCATGGTGATGTTAGTTGGTGGTTATTTGGGTGAA---------GCA------------------GGC------TAT---------------------------------ATG------------------------------------------------------------------TCTGTC------------------TGGCCAGCA---TTCATTATCGGTATGGTCGGTTGGGCTTACATTCTGTGGGAAATC---------------TTT------GGC---GGTGAAGCTGGCAAGTTGAATGCCTCT------TCG---GCACCTCCTTCGGTT---CAG---TCA---GCC---TTC---AAT---ACGATG---CGCTGGATTGTTACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMIEFYLILSA---I-TKVPA-GI------------FWR-LLIGTMVMLVGGYLGE---A------G--Y-----------M----------------------SV------WPA-FIIGMVGWAYILWEI-----F--G-GEAGKLNAS--S-APPSV-Q-S-A-F-N-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-AAA024O16]_FJ545167 [III-Beta3-AAA024O16] clone_Superior_CD1_PR_C2_rhodopsin_gene_partial_cds_FJ545167 gi|224384009|gb|FJ545167| Uncultured microorganism clone Superior.CD1.PR.C2 putative rhodopsin gene, partial cds. Uncultured microorganism clone Superior.CD1.PR.C2 putative rhodopsin gene, partial cds. FJ545167 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/SCGC_AAA024O16-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 SCGC_AAA024O16-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juin-05 Lake Superior other freshwater 47.3 -91.67 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na ATTACCGTTCCTTTGTTAATGATCGAATTTTATTTGATCTTATCTGCAATCACCAAAGTGCCAGCAGGTATCTTCTGGCGCCTGTTGATTGGTACCATGGTGATGTTAGTTGGTGGTTATTTGGGTGAAGCAGGCTATATGTCTGTCTGGCCAGCATTCATTATCGGTATGGTCGGTTGGGCTTACATTCTGTGGGAAATCTTTGGCGGTGAAGCTGGCAAGTTAAATGCCTCTTCGGCACCTCCTTCGGTCCAGTCAGCCTTCAATACGATGCGTTGGATTGTTACCATT ITVPLLMIEFYLILSAITKVPAGIFWRLLIGTMVMLVGGYLGEAGYMSVWPAFIIGMVGWAYILWEIFGGEAGKLNASSAPPSVQSAFNTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTACCGTTCCTTTGTTAATGATCGAATTTTATTTGATCTTATCTGCA---------ATC---ACCAAAGTGCCAGCA---GGTATC------------------------------------TTCTGGCGC---CTGTTGATTGGTACCATGGTGATGTTAGTTGGTGGTTATTTGGGTGAA---------GCA------------------GGC------TAT---------------------------------ATG------------------------------------------------------------------TCTGTC------------------TGGCCAGCA---TTCATTATCGGTATGGTCGGTTGGGCTTACATTCTGTGGGAAATC---------------TTT------GGC---GGTGAAGCTGGCAAGTTAAATGCCTCT------TCG---GCACCTCCTTCGGTC---CAG---TCA---GCC---TTC---AAT---ACGATG---CGTTGGATTGTTACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMIEFYLILSA---I-TKVPA-GI------------FWR-LLIGTMVMLVGGYLGE---A------G--Y-----------M----------------------SV------WPA-FIIGMVGWAYILWEI-----F--G-GEAGKLNAS--S-APPSV-Q-S-A-F-N-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-AAA024O16]_FJ545166 [III-Beta3-AAA024O16] clone_Superior_CD1_PR_A2_rhodopsin_gene_partial_cds_FJ545166 gi|224384007|gb|FJ545166| Uncultured microorganism clone Superior.CD1.PR.A2 putative rhodopsin gene, partial cds. Uncultured microorganism clone Superior.CD1.PR.A2 putative rhodopsin gene, partial cds. FJ545166 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/SCGC_AAA024O16-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 SCGC_AAA024O16-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juin-05 Lake Superior other freshwater 47.3 -91.67 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na ATTACCGTTCCCTTGTTAATGATCGAATTTTATTTGATCTTGTCAGCAATCACCAAAGTGCCAGCAGGTATCTTCTGGCGCCTGTTGATTGGTACCATGGTGATGTTGGTTGGTGGTTATTTGGGTGAAGCAGGCTATATGTCTGTCTGGCCAGCATTCATTATCGGTATGGTCGGTTGGGCTTACATTCTTTGGGAAATCTTTGGCGGTGAAGCTGGCAAGTTGAATGCCTCTTCGGCACCTCCTTCGGTTCAATCAGCCTTCAATACGATGCGTTGGATTGTTACCATT ITVPLLMIEFYLILSAITKVPAGIFWRLLIGTMVMLVGGYLGEAGYMSVWPAFIIGMVGWAYILWEIFGGEAGKLNASSAPPSVQSAFNTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTACCGTTCCCTTGTTAATGATCGAATTTTATTTGATCTTGTCAGCA---------ATC---ACCAAAGTGCCAGCA---GGTATC------------------------------------TTCTGGCGC---CTGTTGATTGGTACCATGGTGATGTTGGTTGGTGGTTATTTGGGTGAA---------GCA------------------GGC------TAT---------------------------------ATG------------------------------------------------------------------TCTGTC------------------TGGCCAGCA---TTCATTATCGGTATGGTCGGTTGGGCTTACATTCTTTGGGAAATC---------------TTT------GGC---GGTGAAGCTGGCAAGTTGAATGCCTCT------TCG---GCACCTCCTTCGGTT---CAA---TCA---GCC---TTC---AAT---ACGATG---CGTTGGATTGTTACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMIEFYLILSA---I-TKVPA-GI------------FWR-LLIGTMVMLVGGYLGE---A------G--Y-----------M----------------------SV------WPA-FIIGMVGWAYILWEI-----F--G-GEAGKLNAS--S-APPSV-Q-S-A-F-N-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-AAA024O16]_EU563292 [III-Beta3-AAA024O16] Psee3D_env_samples_EU563292 gi|171770594|gb|EU563292| Uncultured microorganism clone Psee3D putative proteorhodopsin gene, partial cds Uncultured microorganism clone Psee3D putative proteorhodopsin gene, partial cds EU563292 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/SCGC_AAA024O16-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 SCGC_AAA024O16-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 01-juil-06 Plusssee_at_1m_depth other freshwater 54.18 10.43 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na TGCGCGCAATTCTACCGTTATATTGATTGGTTAATTACAGTGCCACTATTGATGATTGAGTTCTACTTGATTCTTTCAGCAATTGCAAAAGTACCAACAGGCGTGTTTTGGCGCTTGATGATTGGTACATTGGTAATGTTGATCGGTGGATACTTGGGCGAAGCTGGATACATGGCTGTATGGCCTGCATTCATCATCGGTATGATCGGTTGGGTATATATCCTTTGGGAAATCTTCGCAGGCGAAGCCAGCAAGATCAATGCACAACAAGCTCCAGCAAATGTACAGTCAGCATTTAACTTAATGCGTTGGATTGTTACTATCGGCTGGTCCATCTACCCAAGCTTGCGCGCA CAQFYRYIDWLITVPLLMIEFYLILSAIAKVPTGVFWRLMIGTLVMLIGGYLGEAGYMAVWPAFIIGMIGWVYILWEIFAGEASKINAQQAPANVQSAFNLMRWIVTIGWSIYPSLRA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCGCGCAATTCTACCGTTATATTGATTGG------------------------TTAATTACAGTGCCACTATTGATGATTGAGTTCTACTTGATTCTTTCAGCA---------ATT---GCAAAAGTACCAACA---GGCGTG------------------------------------TTTTGGCGC---TTGATGATTGGTACATTGGTAATGTTGATCGGTGGATACTTGGGCGAA---------GCT------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------GCTGTA------------------TGGCCTGCA---TTCATCATCGGTATGATCGGTTGGGTATATATCCTTTGGGAAATC---------------TTC------GCA---GGCGAAGCCAGCAAGATCAATGCACAA------CAA---GCTCCAGCAAATGTA---CAG---TCA---GCA---TTT---AAC---TTAATG---CGTTGGATTGTTACTATC---------------------------------------------------------------GGCTGG---------TCCATCTACCCAAGCTTGCGCGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAQFYRYIDW--------LITVPLLMIEFYLILSA---I-AKVPT-GV------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------M----------------------AV------WPA-FIIGMIGWVYILWEI-----F--A-GEASKINAQ--Q-APANV-Q-S-A-F-N-LM-RWIVTI---------------------GW---SIYPSLRA---------------------------------------------------------------------------------------------- [III-Beta3-AAA024O16]_JX863183 [III-Beta3-AAA024O16] MALINA_OTU21_242_L_env_samples_JX863183 gi|425477316|gb|JX863183| Uncultured bacterium clone MALINA OTU21 242 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU21 242 L putative proteorhodopsin gene, partial cds JX863183 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/SCGC_AAA024O16-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 SCGC_AAA024O16-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 13Aug2009 0m_depth Arctic Ocean marine 69.25 -137.2 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATTACAGTGCCACTATTGATGATTGAGTTCTACTTGATCCTCTCAGCGATTGCAAAAGTTCCAACAGGCGTGTTTTGGCGCTTGATGATTGGTACATTGGTAATGTTGATCGGTGGATACTTAGGCGAAGCTGGATACATGGCTGTATGGCCTGCATTCACCATCGGTATGATCGGTTGGGTATATATCCTTTGGGAAATCTTCGCAGGCGAAGCCAGCAAGATTAATGCACAACAAGCTCCACAGAATGTACAGTCAGCATTTAACTTAATGCGTTGGATTGTTACTATC WLITVPLLMIEFYLILSAIAKVPTGVFWRLMIGTLVMLIGGYLGEAGYMAVWPAFTIGMIGWVYILWEIFAGEASKINAQQAPQNVQSAFNLMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATTACAGTGCCACTATTGATGATTGAGTTCTACTTGATCCTCTCAGCG---------ATT---GCAAAAGTTCCAACA---GGCGTG------------------------------------TTTTGGCGC---TTGATGATTGGTACATTGGTAATGTTGATCGGTGGATACTTAGGCGAA---------GCT------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------GCTGTA------------------TGGCCTGCA---TTCACCATCGGTATGATCGGTTGGGTATATATCCTTTGGGAAATC---------------TTC------GCA---GGCGAAGCCAGCAAGATTAATGCACAA------CAA---GCTCCACAGAATGTA---CAG---TCA---GCA---TTT---AAC---TTAATG---CGTTGGATTGTTACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFYLILSA---I-AKVPT-GV------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------M----------------------AV------WPA-FTIGMIGWVYILWEI-----F--A-GEASKINAQ--Q-APQNV-Q-S-A-F-N-LM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-AAA024O16]_FJ545160 [III-Beta3-AAA024O16] clone_Superior_CD1_PR_B1_rhodopsin_gene_partial_cds_FJ545160 gi|224383995|gb|FJ545160| Uncultured microorganism clone Superior.CD1.PR.B1 putative rhodopsin gene, partial cds. Uncultured microorganism clone Superior.CD1.PR.B1 putative rhodopsin gene, partial cds. FJ545160 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/SCGC_AAA024O16-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 SCGC_AAA024O16-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juin-05 Lake Superior other freshwater 47.3 -91.67 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na ATCACTGTGCCATTGTTGATGGTCGAGTTCTACTTGATCCTCTCGGCAATTACGAAAGTACCAGTAGGCGTGTTCTGGCGTCTGATGATCGGTACGCTTGTCATGCTTGTTGCCGGTTATGTCGGCGAAGCAGGCTATGTCGGCGTTTGGCCAGCCTTCATCGTTGGTATGATTGGTTGGGCGTACATCCTGTACGAAATCTTCCTCGGCGAAGCGGGCAAGATCAACGCCAGCCAGGCACCGGCATCGGTTCAGTCGGCGTTTAACTTGATGCGTCTGATTGTGACCTTT ITVPLLMVEFYLILSAITKVPVGVFWRLMIGTLVMLVAGYVGEAGYVGVWPAFIVGMIGWAYILYEIFLGEAGKINASQAPASVQSAFNLMRLIVTF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACTGTGCCATTGTTGATGGTCGAGTTCTACTTGATCCTCTCGGCA---------ATT---ACGAAAGTACCAGTA---GGCGTG------------------------------------TTCTGGCGT---CTGATGATCGGTACGCTTGTCATGCTTGTTGCCGGTTATGTCGGCGAA---------GCA------------------GGC------TAT---------------------------------GTC------------------------------------------------------------------GGCGTT------------------TGGCCAGCC---TTCATCGTTGGTATGATTGGTTGGGCGTACATCCTGTACGAAATC---------------TTC------CTC---GGCGAAGCGGGCAAGATCAACGCCAGC------CAG---GCACCGGCATCGGTT---CAG---TCG---GCG---TTT---AAC---TTGATG---CGTCTGATTGTGACCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---I-TKVPV-GV------------FWR-LMIGTLVMLVAGYVGE---A------G--Y-----------V----------------------GV------WPA-FIVGMIGWAYILYEI-----F--L-GEAGKINAS--Q-APASV-Q-S-A-F-N-LM-RLIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-AAA024O16]_FJ545165 [III-Beta3-AAA024O16] clone_Superior_CD1_PR_G1_rhodopsin_gene_partial_cds_FJ545165 gi|224384005|gb|FJ545165| Uncultured microorganism clone Superior.CD1.PR.G1 putative rhodopsin gene, partial cds. Uncultured microorganism clone Superior.CD1.PR.G1 putative rhodopsin gene, partial cds. FJ545165 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/SCGC_AAA024O16-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 SCGC_AAA024O16-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juin-05 Lake Superior other freshwater 47.3 -91.67 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na ATCACTGTGCCATTGTTGATGGTCGAGTTCTACTTGATCCTTTCGGCAATTACGAAAGTACCAGTAGGCGTGTTTTGGCGTCTGATGATCGGTACGCTTGTCATGCTTGTTGCCGGTTATGTCGGCGAAGCAGGCTATGTCGGCGTTTGGCCAGCATTCATCGTTGGTATGATTGGTTGGGCGTACATCCTGTACGAAATCTTCCTCGGCGAAGCGGGCAAGATCAATGCCAGCCAGGCACCTGCATCGGTTCAGTCGGCGTTTAACTTGATGCGTCTGATTGTGACCTTC ITVPLLMVEFYLILSAITKVPVGVFWRLMIGTLVMLVAGYVGEAGYVGVWPAFIVGMIGWAYILYEIFLGEAGKINASQAPASVQSAFNLMRLIVTF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACTGTGCCATTGTTGATGGTCGAGTTCTACTTGATCCTTTCGGCA---------ATT---ACGAAAGTACCAGTA---GGCGTG------------------------------------TTTTGGCGT---CTGATGATCGGTACGCTTGTCATGCTTGTTGCCGGTTATGTCGGCGAA---------GCA------------------GGC------TAT---------------------------------GTC------------------------------------------------------------------GGCGTT------------------TGGCCAGCA---TTCATCGTTGGTATGATTGGTTGGGCGTACATCCTGTACGAAATC---------------TTC------CTC---GGCGAAGCGGGCAAGATCAATGCCAGC------CAG---GCACCTGCATCGGTT---CAG---TCG---GCG---TTT---AAC---TTGATG---CGTCTGATTGTGACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---I-TKVPV-GV------------FWR-LMIGTLVMLVAGYVGE---A------G--Y-----------V----------------------GV------WPA-FIVGMIGWAYILYEI-----F--L-GEAGKINAS--Q-APASV-Q-S-A-F-N-LM-RLIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-AAA024O16]_FJ545170 [III-Beta3-AAA024O16] clone_Superior_CD1_PR_G2_rhodopsin_gene_partial_cds_FJ545170 gi|224384015|gb|FJ545170| Uncultured microorganism clone Superior.CD1.PR.G2 putative rhodopsin gene, partial cds. Uncultured microorganism clone Superior.CD1.PR.G2 putative rhodopsin gene, partial cds. FJ545170 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/SCGC_AAA024O16-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 SCGC_AAA024O16-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juin-05 Lake Superior other freshwater 47.3 -91.67 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na ATCACTGTGCCATTGTTGATGGTCGAGTTCTACTTGATCCTCTCGGCAATTACGAAAGTACCAGTAGGCGTGTTCTGGCGTCTGATGATCGGTACGCTTGTCATGCTTGTTGCCGGTTATGTCGGCGAAGCAGGCTATGTCGGCGTTTGGCCAGCCTTCATCGTTGGTATGATTGGTTGGGCGTACATCCTGTACGAAATCTTCCTCGGCGAAGCGGGCAAGATCAACGCCAGCCAGGCACCGGCATCGGTTCAGTCGGCGTTTAACTTGATGCGTCTGATTGTGACCTTT ITVPLLMVEFYLILSAITKVPVGVFWRLMIGTLVMLVAGYVGEAGYVGVWPAFIVGMIGWAYILYEIFLGEAGKINASQAPASVQSAFNLMRLIVTF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACTGTGCCATTGTTGATGGTCGAGTTCTACTTGATCCTCTCGGCA---------ATT---ACGAAAGTACCAGTA---GGCGTG------------------------------------TTCTGGCGT---CTGATGATCGGTACGCTTGTCATGCTTGTTGCCGGTTATGTCGGCGAA---------GCA------------------GGC------TAT---------------------------------GTC------------------------------------------------------------------GGCGTT------------------TGGCCAGCC---TTCATCGTTGGTATGATTGGTTGGGCGTACATCCTGTACGAAATC---------------TTC------CTC---GGCGAAGCGGGCAAGATCAACGCCAGC------CAG---GCACCGGCATCGGTT---CAG---TCG---GCG---TTT---AAC---TTGATG---CGTCTGATTGTGACCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---I-TKVPV-GV------------FWR-LMIGTLVMLVAGYVGE---A------G--Y-----------V----------------------GV------WPA-FIVGMIGWAYILYEI-----F--L-GEAGKINAS--Q-APASV-Q-S-A-F-N-LM-RLIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-AAA024O16]_EU328204 [III-Beta3-AAA024O16] clone_PS350-31_EU328204 gi|164600760|gb|EU328204| Uncultured bacterium clone PS350-31 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PS350-31 putative proteorhodopsin gene, partial cds. EU328204 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/SCGC_AAA024O16-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 SCGC_AAA024O16-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 15-janv-08 01-juin-07 Damariscotta Lake water 1 m depth Atlantic Ocean freshwater 44.105494 -69.473356 Bacteriorhodopsin presence in freshwater lakes Stepanauskas,R. and Sieracki,M.E. Unpublished #na #na TATGTGGATTGGCTGATCACTGTGCCTTTGTTGATGGTTGAATTTTACTTGATCCTCGCAGCAATTACAAAAGTTCCAACAGGCGTTTTTTGGCGCCTGATGATAGGCACTCTTGTAATGCTGGTTGGTGGTTATGTAGGCGAAGCAGGGTATGTGGCAGCTTGGCCAGCCTTCATTGTGGGTATGTTAGGTTGGGCTTACATCCTCTTCGAAATCTTTGCGGGCGAAGCCGGTAAGATTAACGCAAGCGAAGCACCAGTATCTGTTCAGTCTGCTTTTAGCTTGATGCGCCTGATTGTTACGATTGGTTGGGCTATCTACCC YVDWLITVPLLMVEFYLILAAITKVPTGVFWRLMIGTLVMLVGGYVGEAGYVAAWPAFIVGMLGWAYILFEIFAGEAGKINASEAPVSVQSAFSLMRLIVTIGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTGGATTGG------------------------CTGATCACTGTGCCTTTGTTGATGGTTGAATTTTACTTGATCCTCGCAGCA---------ATT---ACAAAAGTTCCAACA---GGCGTT------------------------------------TTTTGGCGC---CTGATGATAGGCACTCTTGTAATGCTGGTTGGTGGTTATGTAGGCGAA---------GCA------------------GGG------TAT---------------------------------GTG------------------------------------------------------------------GCAGCT------------------TGGCCAGCC---TTCATTGTGGGTATGTTAGGTTGGGCTTACATCCTCTTCGAAATC---------------TTT------GCG---GGCGAAGCCGGTAAGATTAACGCAAGC------GAA---GCACCAGTATCTGTT---CAG---TCT---GCT---TTT---AGC---TTGATG---CGCCTGATTGTTACGATT---------------------------------------------------------------GGTTGG---------GCTATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LITVPLLMVEFYLILAA---I-TKVPT-GV------------FWR-LMIGTLVMLVGGYVGE---A------G--Y-----------V----------------------AA------WPA-FIVGMLGWAYILFEI-----F--A-GEAGKINAS--E-APVSV-Q-S-A-F-S-LM-RLIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Beta3-AAA024O16]_EU328210 [III-Beta3-AAA024O16] clone_PS350-40_EU328210 gi|164600770|gb|EU328210| Uncultured bacterium clone PS350-40 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PS350-40 putative proteorhodopsin gene, partial cds. EU328210 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/SCGC_AAA024O16-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 SCGC_AAA024O16-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 15-janv-08 01-juin-07 Damariscotta Lake water 1 m depth Atlantic Ocean freshwater 44.105494 -69.473356 Bacteriorhodopsin presence in freshwater lakes Stepanauskas,R. and Sieracki,M.E. Unpublished #na #na TACGTCGACTGGCTGATCACTGTGCCTTTGTTGATGGTTGAATTTTACTTGATCCTCGCAGCAATTACAAAAGTTCCAACAGGCGTTTTTTGGCGCCTGATGATAGGCACTCTTGTAATGCTGGTAGGTGGTTATGTAGGCGAAGCAGGGTATGTGGCAGCTTGGCCAGCCTTCATTGTGGGTATGTTAGGTTGGGCTTACATCCTCTTCGAAATCTTTGCGGGCGAAGCCGGTAAGATTAACGCAAGCGAAGCACCAGTATCTGTTCAGTCTGCTTTTAGCTTGATGCGCCTGATTGTTACGATTGGTTGGGCTATTTATCC YVDWLITVPLLMVEFYLILAAITKVPTGVFWRLMIGTLVMLVGGYVGEAGYVAAWPAFIVGMLGWAYILFEIFAGEAGKINASEAPVSVQSAFSLMRLIVTIGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACGTCGACTGG------------------------CTGATCACTGTGCCTTTGTTGATGGTTGAATTTTACTTGATCCTCGCAGCA---------ATT---ACAAAAGTTCCAACA---GGCGTT------------------------------------TTTTGGCGC---CTGATGATAGGCACTCTTGTAATGCTGGTAGGTGGTTATGTAGGCGAA---------GCA------------------GGG------TAT---------------------------------GTG------------------------------------------------------------------GCAGCT------------------TGGCCAGCC---TTCATTGTGGGTATGTTAGGTTGGGCTTACATCCTCTTCGAAATC---------------TTT------GCG---GGCGAAGCCGGTAAGATTAACGCAAGC------GAA---GCACCAGTATCTGTT---CAG---TCT---GCT---TTT---AGC---TTGATG---CGCCTGATTGTTACGATT---------------------------------------------------------------GGTTGG---------GCTATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LITVPLLMVEFYLILAA---I-TKVPT-GV------------FWR-LMIGTLVMLVGGYVGE---A------G--Y-----------V----------------------AA------WPA-FIVGMLGWAYILFEI-----F--A-GEAGKINAS--E-APVSV-Q-S-A-F-S-LM-RLIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Beta3]_JX863313 [III-Beta3] MALINA_OTU43_165_L_env_samples_JX863313 gi|425477576|gb|JX863313| Uncultured bacterium clone MALINA OTU43 165 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU43 165 L putative proteorhodopsin mRNA, partial cds JX863313 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 08Aug2009 3m_depth Arctic Ocean marine 70.8 -133.73 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGATCACCGCACCGTTGCTGATGATTGAGTTCTACCTGATTCTGTCCGCTATCACCAAGGTTCCTGTTGGCGTTTTCTGGCGCCTCATGATCGGTACGTTGGTGATGTTGATCGGTGGTTACTTGGGCGAAGCCGGCTACATGCCTGTGTTGCCTGCATTCATCATTGGCATGCTGGGCTGGGCTTACATCTTGTATGAAATTTTCATGGGCCGGGCCAGCAAGATCAACGCCGAAAAAGCTCCAGCTTCAGTCCAGTCGGCCTTCAATACAATGCGTTTGATTGTGACCATC WLITAPLLMIEFYLILSAITKVPVGVFWRLMIGTLVMLIGGYLGEAGYMPVLPAFIIGMLGWAYILYEIFMGRASKINAEKAPASVQSAFNTMRLIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATCACCGCACCGTTGCTGATGATTGAGTTCTACCTGATTCTGTCCGCT---------ATC---ACCAAGGTTCCTGTT---GGCGTT------------------------------------TTCTGGCGC---CTCATGATCGGTACGTTGGTGATGTTGATCGGTGGTTACTTGGGCGAA---------GCC------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------CCTGTG------------------TTGCCTGCA---TTCATCATTGGCATGCTGGGCTGGGCTTACATCTTGTATGAAATT---------------TTC------ATG---GGCCGGGCCAGCAAGATCAACGCCGAA------AAA---GCTCCAGCTTCAGTC---CAG---TCG---GCC---TTC---AAT---ACAATG---CGTTTGATTGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITAPLLMIEFYLILSA---I-TKVPV-GV------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------M----------------------PV------LPA-FIIGMLGWAYILYEI-----F--M-GRASKINAE--K-APASV-Q-S-A-F-N-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-a]_DQ203484 [III-Alpha6-a] medHO10G7_env_samples_DQ203484 gi|77547416|gb|DQ203484| Uncultured bacterium clone medHO10G7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10G7 predicted proteorhodopsin gene, partial cds DQ203484 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTGATCACAGTGCCATTGCTGATGGTTGAGTTCTATCTCATCCTGCGGGCCATTGGCAACGTGTCCGGTGGTATCTTCTGGCGTCTGATGATCGGTACACTGGTCATGCTTGTTGGCGGATATGCCGGTGAAATCGGCTATATCAACGTATGGCTTGGTTTCATCATCGGAATGGCCGGTTGGGCCTACATTCTGTATGAGATCTTTGCTGGTGAAGCTGGCAAGATGTCAGCAGATCAGGCTCCGGAGTCCGTCAAGTCTGCATTCTCGACAATGCGCTGGATTGTGACAATCGGGTGGGCCATTTACCCA RYIDWLITVPLLMVEFYLILRAIGNVSGGIFWRLMIGTLVMLVGGYAGEIGYINVWLGFIIGMAGWAYILYEIFAGEAGKMSADQAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTGATCACAGTGCCATTGCTGATGGTTGAGTTCTATCTCATCCTGCGGGCC---------ATT---GGCAACGTGTCCGGT---GGTATC------------------------------------TTCTGGCGT---CTGATGATCGGTACACTGGTCATGCTTGTTGGCGGATATGCCGGTGAA---------ATC------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AACGTA------------------TGGCTTGGT---TTCATCATCGGAATGGCCGGTTGGGCCTACATTCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGATGTCAGCAGAT------CAG---GCTCCGGAGTCCGTC---AAG---TCT---GCA---TTC---TCG---ACAATG---CGCTGGATTGTGACAATC---------------------------------------------------------------GGGTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYLILRA---I-GNVSG-GI------------FWR-LMIGTLVMLVGGYAGE---I------G--Y-----------I----------------------NV------WLG-FIIGMAGWAYILYEI-----F--A-GEAGKMSAD--Q-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha6-a]_DQ203600 [III-Alpha6-a] medHO120B8_env_samples_DQ203600 gi|77547648|gb|DQ203600| Uncultured bacterium clone medHO120B8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120B8 predicted proteorhodopsin gene, partial cds DQ203600 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATACATTGATTGGCTGATCACAGTGCCATTGCTGATGGTTGAGTTCTATCTCATCCTGCGGGCCATTGGCAACGTGTCCGGTGGTATCTTCTGGCGTCTGATGATCGGTACACTGGTCATGCTTGTTGGCGGATATGCCGGTGAAATCGGCTATATCAACGTATGGCTTGGTTTCATCATCGGGATGGCCGGTTGGGCCTACATTCTGTATGAGATCTTTGCTGGTGAAGCTGGCAAGATGTCAGCAGATCAGGCTCCGGAGTCCGTCAAGTCTGCATTCTCGACAATGCGCTGGATTGTGACAATCGGGTGGGCCATATATCCA RYIDWLITVPLLMVEFYLILRAIGNVSGGIFWRLMIGTLVMLVGGYAGEIGYINVWLGFIIGMAGWAYILYEIFAGEAGKMSADQAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATTGATTGG------------------------CTGATCACAGTGCCATTGCTGATGGTTGAGTTCTATCTCATCCTGCGGGCC---------ATT---GGCAACGTGTCCGGT---GGTATC------------------------------------TTCTGGCGT---CTGATGATCGGTACACTGGTCATGCTTGTTGGCGGATATGCCGGTGAA---------ATC------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AACGTA------------------TGGCTTGGT---TTCATCATCGGGATGGCCGGTTGGGCCTACATTCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGATGTCAGCAGAT------CAG---GCTCCGGAGTCCGTC---AAG---TCT---GCA---TTC---TCG---ACAATG---CGCTGGATTGTGACAATC---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYLILRA---I-GNVSG-GI------------FWR-LMIGTLVMLVGGYAGE---I------G--Y-----------I----------------------NV------WLG-FIIGMAGWAYILYEI-----F--A-GEAGKMSAD--Q-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha6-a]_DQ203592 [III-Alpha6-a] medHO120A8_env_samples_DQ203592 gi|77547632|gb|DQ203592| Uncultured bacterium clone medHO120A8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120A8 predicted proteorhodopsin gene, partial cds DQ203592 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTATATTGATTGGCTGATCACAGTGCCATTGCTGATGGTTGAGTTCTATCTCATCCTGCGGGCCATTGGCAACGTGTCCGGTGGTATCTTCTGGCGTCTGATGATCGGTACACTGGTCATGCTTGTTGGCGGATATGCCGGTGAAATCGGCTATATCAACGTATGGCTTGGTTTCATCATCGGAATGGCCGGTTGGGCCTACATTCTGTATGAGATCTTTGCTGGTGAAGCTGGCAAGATGTCAGCAGATCAGGCTCCGGAGTCCGTCAAGTCTGCATTCTCGACAATGCGCTGGATTGTGACAATCGGTTGGGCCATTTATCCA RYIDWLITVPLLMVEFYLILRAIGNVSGGIFWRLMIGTLVMLVGGYAGEIGYINVWLGFIIGMAGWAYILYEIFAGEAGKMSADQAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTATATTGATTGG------------------------CTGATCACAGTGCCATTGCTGATGGTTGAGTTCTATCTCATCCTGCGGGCC---------ATT---GGCAACGTGTCCGGT---GGTATC------------------------------------TTCTGGCGT---CTGATGATCGGTACACTGGTCATGCTTGTTGGCGGATATGCCGGTGAA---------ATC------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AACGTA------------------TGGCTTGGT---TTCATCATCGGAATGGCCGGTTGGGCCTACATTCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGATGTCAGCAGAT------CAG---GCTCCGGAGTCCGTC---AAG---TCT---GCA---TTC---TCG---ACAATG---CGCTGGATTGTGACAATC---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYLILRA---I-GNVSG-GI------------FWR-LMIGTLVMLVGGYAGE---I------G--Y-----------I----------------------NV------WLG-FIIGMAGWAYILYEI-----F--A-GEAGKMSAD--Q-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha6-a]_DQ203349 [III-Alpha6-a] MedHO102A6_env_samples_DQ203349 gi|77547146|gb|DQ203349| Uncultured bacterium clone MedHO102A6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102A6 predicted proteorhodopsin gene, partial cds DQ203349 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATAGATTGGCTGATCACAGTGCCATTGCTGATGGTTGAGTTCTATCTCATCCTGCGGGCCATTGGCAACGTGTCCGGTGGTATCTTCTGGCGTCTGATGATCGGTACACTGGTCATGCTTGTCGGCGGATATGCCGGTGAAATCGGCTATATCAACGTATGGCTTGGTTTCATCATCGGAATGGCCGGTTGGGCCTACATTCTGTATGAGATCTTTGCTGGTGAAGCTGGCAAGATGTCAGCAGATCAGGCTCCGGAGTCCGTCAAGTCTGCATTCTCGACAATGCGCTGGATTGTGACAATCGGGTGGGCCATTTATCCA SYIDWLITVPLLMVEFYLILRAIGNVSGGIFWRLMIGTLVMLVGGYAGEIGYINVWLGFIIGMAGWAYILYEIFAGEAGKMSADQAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATAGATTGG------------------------CTGATCACAGTGCCATTGCTGATGGTTGAGTTCTATCTCATCCTGCGGGCC---------ATT---GGCAACGTGTCCGGT---GGTATC------------------------------------TTCTGGCGT---CTGATGATCGGTACACTGGTCATGCTTGTCGGCGGATATGCCGGTGAA---------ATC------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AACGTA------------------TGGCTTGGT---TTCATCATCGGAATGGCCGGTTGGGCCTACATTCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGATGTCAGCAGAT------CAG---GCTCCGGAGTCCGTC---AAG---TCT---GCA---TTC---TCG---ACAATG---CGCTGGATTGTGACAATC---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMVEFYLILRA---I-GNVSG-GI------------FWR-LMIGTLVMLVGGYAGE---I------G--Y-----------I----------------------NV------WLG-FIIGMAGWAYILYEI-----F--A-GEAGKMSAD--Q-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha6-a]_DQ203421 [III-Alpha6-a] MedHO102H11_env_samples_DQ203421 gi|77547290|gb|DQ203421| Uncultured bacterium clone MedHO102H11 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102H11 predicted proteorhodopsin gene, partial cds DQ203421 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGATTGGCTGATCACAGTGCCATTGCTTATGGTTGAGTTCTATCTCATCCTGCGGGCCATTGGCAACGTGTCCGGTGGTATCTTCTGGCGTCTGATGATCGGTACACTGGTCATGCTTGTCGGCGGATATGCCGGTGAAATCGGCTATATCAACGTATGGCTTGGTTTCATCATCGGAATGGCCGGTTGGGCCTACATTCTGTATGAGATCTTTGCTGGTGAAGCTGGCAAGATGTCAGCAGATCAGGCTCCGGAGTCCGTCAAGTCTGCATTCTCGACAATGCGCTGGATTGTGACAATCGGGTGGGCCATCTACCCA SYIDWLITVPLLMVEFYLILRAIGNVSGGIFWRLMIGTLVMLVGGYAGEIGYINVWLGFIIGMAGWAYILYEIFAGEAGKMSADQAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGATTGG------------------------CTGATCACAGTGCCATTGCTTATGGTTGAGTTCTATCTCATCCTGCGGGCC---------ATT---GGCAACGTGTCCGGT---GGTATC------------------------------------TTCTGGCGT---CTGATGATCGGTACACTGGTCATGCTTGTCGGCGGATATGCCGGTGAA---------ATC------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AACGTA------------------TGGCTTGGT---TTCATCATCGGAATGGCCGGTTGGGCCTACATTCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGATGTCAGCAGAT------CAG---GCTCCGGAGTCCGTC---AAG---TCT---GCA---TTC---TCG---ACAATG---CGCTGGATTGTGACAATC---------------------------------------------------------------GGGTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMVEFYLILRA---I-GNVSG-GI------------FWR-LMIGTLVMLVGGYAGE---I------G--Y-----------I----------------------NV------WLG-FIIGMAGWAYILYEI-----F--A-GEAGKMSAD--Q-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha6-a]_DQ203586 [III-Alpha6-a] medHO120A2_env_samples_DQ203586 gi|77547620|gb|DQ203586| Uncultured bacterium clone medHO120A2 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120A2 predicted proteorhodopsin gene, partial cds DQ203586 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGCTACATTGATTGGCTGATCACAGTGCCATTGCTTATGGTTGAGTTCTATCTCATCCTGCGGGCCATTGGCAACGTGTCCGGTGGTATCTTCTGGCGTCTGATGATCGGTACACTGGTCATGCTTGTCGGCGGATATGCCGGTGAAATCGGCTATATCAACGTATGGCTTGGTTTCATCATCGGAATGGCCGGTTGGGCCTACATTCTGTATGAGATCTTTGCTGGTGAAGCTGGCAAGATGTCAGCAGATCAGGCTCCGGAGTCCGTCAAGTCTGCATTCTCGACAATGCGCTGGATTGTGACAATCGGGTGGGCCATCTACCCA RYIDWLITVPLLMVEFYLILRAIGNVSGGIFWRLMIGTLVMLVGGYAGEIGYINVWLGFIIGMAGWAYILYEIFAGEAGKMSADQAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTACATTGATTGG------------------------CTGATCACAGTGCCATTGCTTATGGTTGAGTTCTATCTCATCCTGCGGGCC---------ATT---GGCAACGTGTCCGGT---GGTATC------------------------------------TTCTGGCGT---CTGATGATCGGTACACTGGTCATGCTTGTCGGCGGATATGCCGGTGAA---------ATC------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AACGTA------------------TGGCTTGGT---TTCATCATCGGAATGGCCGGTTGGGCCTACATTCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGATGTCAGCAGAT------CAG---GCTCCGGAGTCCGTC---AAG---TCT---GCA---TTC---TCG---ACAATG---CGCTGGATTGTGACAATC---------------------------------------------------------------GGGTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYLILRA---I-GNVSG-GI------------FWR-LMIGTLVMLVGGYAGE---I------G--Y-----------I----------------------NV------WLG-FIIGMAGWAYILYEI-----F--A-GEAGKMSAD--Q-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha6-a]_DQ203483 [III-Alpha6-a] medHO10G6_env_samples_DQ203483 gi|77547414|gb|DQ203483| Uncultured bacterium clone medHO10G6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10G6 predicted proteorhodopsin gene, partial cds DQ203483 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATACATTGATTGGCTGATCACAGTGCCATTGCTTATGGTTGAGTTCTATCTCATCCTGCGGGCCATTGGCAACGTGTCCGGTGGTATCTTCTGGCGTCTGATGATCGGTACACTGGTCATGCTTGTCGGCGGATATGCCGGTGAAATCGGCTATATCAACGTATGGCTTGGTTTCATCATCGGAATGGCCGGTTGGGCCTACATTCTGTATGAGATCTTTGCTGGTGAAGCTGGCAAGATGTCAGCAGATCAGGCTCCGGAGTCCGTCAAGTCTGCATTCTCGACAATGCGCTGGATTGTGACAATCGGGTGGGCCATCTATCCA RYIDWLITVPLLMVEFYLILRAIGNVSGGIFWRLMIGTLVMLVGGYAGEIGYINVWLGFIIGMAGWAYILYEIFAGEAGKMSADQAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATTGATTGG------------------------CTGATCACAGTGCCATTGCTTATGGTTGAGTTCTATCTCATCCTGCGGGCC---------ATT---GGCAACGTGTCCGGT---GGTATC------------------------------------TTCTGGCGT---CTGATGATCGGTACACTGGTCATGCTTGTCGGCGGATATGCCGGTGAA---------ATC------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AACGTA------------------TGGCTTGGT---TTCATCATCGGAATGGCCGGTTGGGCCTACATTCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGATGTCAGCAGAT------CAG---GCTCCGGAGTCCGTC---AAG---TCT---GCA---TTC---TCG---ACAATG---CGCTGGATTGTGACAATC---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYLILRA---I-GNVSG-GI------------FWR-LMIGTLVMLVGGYAGE---I------G--Y-----------I----------------------NV------WLG-FIIGMAGWAYILYEI-----F--A-GEAGKMSAD--Q-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha6-a]_DQ203493 [III-Alpha6-a] MedHO1202A11_env_samples_DQ203493 gi|77547434|gb|DQ203493| Uncultured bacterium clone MedHO1202A11 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202A11 predicted proteorhodopsin gene, partial cds DQ203493 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATACATTGATTGGCTGATCACAGTGCCATTGCTGATGGTTGAGTTCTATCTCATCCTGCGGGCCATTGGCAACGTGTCCGGTGGTATCTTCTGGCGTCTGATGATCGGTACACTGGTCATGCTTGTCGGCGGATATGCCGGTGAAATCGGCTATATCAACGTATGGCTTGGTTTCATCATCGGAATGGCCGGTTGGGCCTACATTCTGTATGAGATCTTTGCTGGTGAAGCTGGCAAGATGTCAGCAGATCAGGCTCCGGAGTCCGTCAAGTCTGCATTCTCGACAATGCGCTGGATTGTGACAATCGGGTGGGCCATATATCCA RYIDWLITVPLLMVEFYLILRAIGNVSGGIFWRLMIGTLVMLVGGYAGEIGYINVWLGFIIGMAGWAYILYEIFAGEAGKMSADQAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATTGATTGG------------------------CTGATCACAGTGCCATTGCTGATGGTTGAGTTCTATCTCATCCTGCGGGCC---------ATT---GGCAACGTGTCCGGT---GGTATC------------------------------------TTCTGGCGT---CTGATGATCGGTACACTGGTCATGCTTGTCGGCGGATATGCCGGTGAA---------ATC------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AACGTA------------------TGGCTTGGT---TTCATCATCGGAATGGCCGGTTGGGCCTACATTCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGATGTCAGCAGAT------CAG---GCTCCGGAGTCCGTC---AAG---TCT---GCA---TTC---TCG---ACAATG---CGCTGGATTGTGACAATC---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYLILRA---I-GNVSG-GI------------FWR-LMIGTLVMLVGGYAGE---I------G--Y-----------I----------------------NV------WLG-FIIGMAGWAYILYEI-----F--A-GEAGKMSAD--Q-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha6-a]_DQ203575 [III-Alpha6-a] MedHO1202H3_env_samples_DQ203575 gi|77547598|gb|DQ203575| Uncultured bacterium clone MedHO1202H3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202H3 predicted proteorhodopsin gene, partial cds DQ203575 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTGATCACAGTGCCATTGCTGATGGTTGAGTTCTATCTCATCCTGCGGGCTATCGGCAACGTGTCCGGTGGTATCTTCTGGCGTCTGATGATCGGTACACTGGTCATGCTTGTCGGCGGATATGCCGGTGAAATCGGCTATATCAACGTATGGCTTGGTTTCATCATCGGAATGGCCGGTTGGGCCTACATTCTGTATGAGATCTTTGCTGGTGAAGCTGGCAAGATGTCAGCAGATCAGGCTCCGGAGTCCGTCAAGTCTGCATTCTCGACAATGCGCTGGATTGTGACAATCGGGTGGGCCATTTATCCA RYIDWLITVPLLMVEFYLILRAIGNVSGGIFWRLMIGTLVMLVGGYAGEIGYINVWLGFIIGMAGWAYILYEIFAGEAGKMSADQAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTGATCACAGTGCCATTGCTGATGGTTGAGTTCTATCTCATCCTGCGGGCT---------ATC---GGCAACGTGTCCGGT---GGTATC------------------------------------TTCTGGCGT---CTGATGATCGGTACACTGGTCATGCTTGTCGGCGGATATGCCGGTGAA---------ATC------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AACGTA------------------TGGCTTGGT---TTCATCATCGGAATGGCCGGTTGGGCCTACATTCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGATGTCAGCAGAT------CAG---GCTCCGGAGTCCGTC---AAG---TCT---GCA---TTC---TCG---ACAATG---CGCTGGATTGTGACAATC---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYLILRA---I-GNVSG-GI------------FWR-LMIGTLVMLVGGYAGE---I------G--Y-----------I----------------------NV------WLG-FIIGMAGWAYILYEI-----F--A-GEAGKMSAD--Q-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha6-a]_DQ203432 [III-Alpha6-a] medHO10A1_env_samples_DQ203432 gi|77547312|gb|DQ203432| Uncultured bacterium clone medHO10A1 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10A1 predicted proteorhodopsin gene, partial cds DQ203432 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGATTGGCTGATCACAGTGCCATTGCTGATGGTTGAGTTCTATCTCATCCTGCGGGCTATCGGCAACGTGTCCGGTGGTATCTTCTGGCGTCTGATGATCGGTACACTGGTCATGCTTGTCGGCGGATATGCCGGTGAAATCGGCTATATCAACGTATGGCTTGGTTTCATCATCGGAATGGCCGGTTGGGCCTACATTCTGTATGAGATCTTTGCTGGTGAAGCTGGCAAGATGTCAGCAGATCAGGCTCCGGAGTCCGTCAAGTCTGCATTCTCGACAATGCGCTGGATTGTGACAATCGGGTGGGCCATATACCCA RYIDWLITVPLLMVEFYLILRAIGNVSGGIFWRLMIGTLVMLVGGYAGEIGYINVWLGFIIGMAGWAYILYEIFAGEAGKMSADQAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGATTGG------------------------CTGATCACAGTGCCATTGCTGATGGTTGAGTTCTATCTCATCCTGCGGGCT---------ATC---GGCAACGTGTCCGGT---GGTATC------------------------------------TTCTGGCGT---CTGATGATCGGTACACTGGTCATGCTTGTCGGCGGATATGCCGGTGAA---------ATC------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AACGTA------------------TGGCTTGGT---TTCATCATCGGAATGGCCGGTTGGGCCTACATTCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGATGTCAGCAGAT------CAG---GCTCCGGAGTCCGTC---AAG---TCT---GCA---TTC---TCG---ACAATG---CGCTGGATTGTGACAATC---------------------------------------------------------------GGGTGG---------GCCATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYLILRA---I-GNVSG-GI------------FWR-LMIGTLVMLVGGYAGE---I------G--Y-----------I----------------------NV------WLG-FIIGMAGWAYILYEI-----F--A-GEAGKMSAD--Q-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha6-a]_DQ203377 [III-Alpha6-a] MedHO102D12_env_samples_DQ203377 gi|77547202|gb|DQ203377| Uncultured bacterium clone MedHO102D12 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102D12 predicted proteorhodopsin gene, partial cds DQ203377 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTGATCACAGTGCCATTGCTGATGGTTGAGTTCTATCTCATCCTGCGGGCTATCGGCAACGTGTCCGGTGGTATCTTCTGGCGTCTGATGATCGGTACACTGGTCATGCTTGTCGGCGGATATGCCGGTGAAATCGGCTATATCAACGTATGGCTTGGTTTCATCATCGGAATGGCCGGTTGGGCCTACATTCTGTATGAGATCTTTGCTGGTGAAGCTGGCAAGATGTCAGCAGATCAGGCTCCGGAGTCCGTCAAGTCTGCATTCTCGACAATGCGCTGGATTGTGACAATCGGTTGGGCCATTTACCCA RYIDWLITVPLLMVEFYLILRAIGNVSGGIFWRLMIGTLVMLVGGYAGEIGYINVWLGFIIGMAGWAYILYEIFAGEAGKMSADQAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTGATCACAGTGCCATTGCTGATGGTTGAGTTCTATCTCATCCTGCGGGCT---------ATC---GGCAACGTGTCCGGT---GGTATC------------------------------------TTCTGGCGT---CTGATGATCGGTACACTGGTCATGCTTGTCGGCGGATATGCCGGTGAA---------ATC------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AACGTA------------------TGGCTTGGT---TTCATCATCGGAATGGCCGGTTGGGCCTACATTCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGATGTCAGCAGAT------CAG---GCTCCGGAGTCCGTC---AAG---TCT---GCA---TTC---TCG---ACAATG---CGCTGGATTGTGACAATC---------------------------------------------------------------GGTTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYLILRA---I-GNVSG-GI------------FWR-LMIGTLVMLVGGYAGE---I------G--Y-----------I----------------------NV------WLG-FIIGMAGWAYILYEI-----F--A-GEAGKMSAD--Q-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha6-a]_EU079192 [III-Alpha6-a] NASB_41_env_samples_EU079192 gi|156106544|gb|EU079192| Uncultured organism clone NASB 41 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 41 putative proteorhodopsin gene, partial cds EU079192 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGTTATGTCGACTGGCTGATCACAGTGCCATTGCTGATGGTTGAGTTCTATCTCATCCTGCGGGCTATCGGCAACGTGTCCGGTGGTATCTTCTGGCGTCTGATGATCGGTACACTGGTCATGCTTGTCGGCGGATATGCCGGTGAAATCGGCTATATCAACGTATGGCTTGGTTTCATCATCGGAATGGCCGGTTGGGCCTACATTCTGTATGAGATCTTTGCTGGTGAAGCTGGCAAGATGTCAGCAGATCAGGCTCCGGAGTCCGTCAAGTCTGCATTCTCGACAATGCGCTGGATTGTGACAATCGGATGGGCAATCTAC RYVDWLITVPLLMVEFYLILRAIGNVSGGIFWRLMIGTLVMLVGGYAGEIGYINVWLGFIIGMAGWAYILYEIFAGEAGKMSADQAPESVKSAFSTMRWIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTATGTCGACTGG------------------------CTGATCACAGTGCCATTGCTGATGGTTGAGTTCTATCTCATCCTGCGGGCT---------ATC---GGCAACGTGTCCGGT---GGTATC------------------------------------TTCTGGCGT---CTGATGATCGGTACACTGGTCATGCTTGTCGGCGGATATGCCGGTGAA---------ATC------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AACGTA------------------TGGCTTGGT---TTCATCATCGGAATGGCCGGTTGGGCCTACATTCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGATGTCAGCAGAT------CAG---GCTCCGGAGTCCGTC---AAG---TCT---GCA---TTC---TCG---ACAATG---CGCTGGATTGTGACAATC---------------------------------------------------------------GGATGG---------GCAATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LITVPLLMVEFYLILRA---I-GNVSG-GI------------FWR-LMIGTLVMLVGGYAGE---I------G--Y-----------I----------------------NV------WLG-FIIGMAGWAYILYEI-----F--A-GEAGKMSAD--Q-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Alpha6-a]_DQ203553 [III-Alpha6-a] MedHO1202F2_env_samples_DQ203553 gi|77547554|gb|DQ203553| Uncultured bacterium clone MedHO1202F2 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202F2 predicted proteorhodopsin gene, partial cds DQ203553 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGATTGGCTGATCACAGTGCCATTGCTGATGGTTGAGTTCTATCTCATCCTGCGGGCCATTGGCAACGTGTCCGGTGGTATCTTCTGGCGTCTGATGATCGGTACACTGGTCATGCTTGTCGGCGGATATGCCGGTGAAATCGGCTATATCAACGTATGGCTTGGTTTCATCATCGGAATGGCCGGTTGGGCCTACATTCTGTATGAGATCTTTGCTGGTGAAGCTGGCAAGATGTCAGCAGATCAGGCTCCGGAGTCCGTCAAGTCTGCATTCTCGACAATGCGCTGGATTGTGACAATCGGTTGGGCCATATATCCA SYIDWLITVPLLMVEFYLILRAIGNVSGGIFWRLMIGTLVMLVGGYAGEIGYINVWLGFIIGMAGWAYILYEIFAGEAGKMSADQAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGATTGG------------------------CTGATCACAGTGCCATTGCTGATGGTTGAGTTCTATCTCATCCTGCGGGCC---------ATT---GGCAACGTGTCCGGT---GGTATC------------------------------------TTCTGGCGT---CTGATGATCGGTACACTGGTCATGCTTGTCGGCGGATATGCCGGTGAA---------ATC------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AACGTA------------------TGGCTTGGT---TTCATCATCGGAATGGCCGGTTGGGCCTACATTCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGATGTCAGCAGAT------CAG---GCTCCGGAGTCCGTC---AAG---TCT---GCA---TTC---TCG---ACAATG---CGCTGGATTGTGACAATC---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMVEFYLILRA---I-GNVSG-GI------------FWR-LMIGTLVMLVGGYAGE---I------G--Y-----------I----------------------NV------WLG-FIIGMAGWAYILYEI-----F--A-GEAGKMSAD--Q-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha6-a]_DQ203565 [III-Alpha6-a] MedHO1202G5_env_samples_DQ203565 gi|77547578|gb|DQ203565| Uncultured bacterium clone MedHO1202G5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202G5 predicted proteorhodopsin gene, partial cds DQ203565 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGATTGGCTGATCACAGTGCCATTGCTGATGGTTGAGTTCTATCTCATCCTGCGGGCCATTGGCAACGTGTCCGGTGGTATCTTCTGGCGTCTGATGATCGGTACACTGGTCATGCTTGTTGGCGGATATGCCGGTGAAATCGGCTATATCAACGTATGGCTTGGTTTCATCATCGGAATGGCCGGTTGGGCCTACATTCTGTATGAGATCTTTGCTGGTGAAGCTGGCAAGATGTCAGCAGATCAGGCTCCGGAGTCCGTCAAGTCTGCATTCTCGACAATGCGCTGGATTGTGACAATCGGTTGGGCCATATATCCA SYIDWLITVPLLMVEFYLILRAIGNVSGGIFWRLMIGTLVMLVGGYAGEIGYINVWLGFIIGMAGWAYILYEIFAGEAGKMSADQAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGATTGG------------------------CTGATCACAGTGCCATTGCTGATGGTTGAGTTCTATCTCATCCTGCGGGCC---------ATT---GGCAACGTGTCCGGT---GGTATC------------------------------------TTCTGGCGT---CTGATGATCGGTACACTGGTCATGCTTGTTGGCGGATATGCCGGTGAA---------ATC------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AACGTA------------------TGGCTTGGT---TTCATCATCGGAATGGCCGGTTGGGCCTACATTCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGATGTCAGCAGAT------CAG---GCTCCGGAGTCCGTC---AAG---TCT---GCA---TTC---TCG---ACAATG---CGCTGGATTGTGACAATC---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMVEFYLILRA---I-GNVSG-GI------------FWR-LMIGTLVMLVGGYAGE---I------G--Y-----------I----------------------NV------WLG-FIIGMAGWAYILYEI-----F--A-GEAGKMSAD--Q-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha6-a]_DQ203605 [III-Alpha6-a] medHO120C2_env_samples_DQ203605 gi|77547658|gb|DQ203605| Uncultured bacterium clone medHO120C2 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120C2 predicted proteorhodopsin gene, partial cds DQ203605 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGATTGGCTGATCACAGTGCCATTGCTGATGGTTGAGTTCTATCTCATCCTGCGGGCCATTGGCAACGTGTCCGGTGGTATCTTCTGGCGTCTGATGATCGGTACACTGGTCATGCTTGTCGGCGGATATGCCGGTGAAATCGGCTATATCAACGTATGGCTTGGTTTCATCATCGGAATGGCCGGTTGGGCCTACATTCTGTATGAGATCTTTGCTGGTGAAGCTGGCAAGATGTCAGCAGATCAGGCTCCGGAGTCCGTCAAGTCTGCATTCTCGACAATGCGCTGGATTGTGACAATCGGTTGGGCCATATATCCA SYIDWLITVPLLMVEFYLILRAIGNVSGGIFWRLMIGTLVMLVGGYAGEIGYINVWLGFIIGMAGWAYILYEIFAGEAGKMSADQAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGATTGG------------------------CTGATCACAGTGCCATTGCTGATGGTTGAGTTCTATCTCATCCTGCGGGCC---------ATT---GGCAACGTGTCCGGT---GGTATC------------------------------------TTCTGGCGT---CTGATGATCGGTACACTGGTCATGCTTGTCGGCGGATATGCCGGTGAA---------ATC------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AACGTA------------------TGGCTTGGT---TTCATCATCGGAATGGCCGGTTGGGCCTACATTCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGATGTCAGCAGAT------CAG---GCTCCGGAGTCCGTC---AAG---TCT---GCA---TTC---TCG---ACAATG---CGCTGGATTGTGACAATC---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMVEFYLILRA---I-GNVSG-GI------------FWR-LMIGTLVMLVGGYAGE---I------G--Y-----------I----------------------NV------WLG-FIIGMAGWAYILYEI-----F--A-GEAGKMSAD--Q-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha6-a]_DQ203618 [III-Alpha6-a] medHO120D6_env_samples_DQ203618 gi|77547684|gb|DQ203618| Uncultured bacterium clone medHO120D6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120D6 predicted proteorhodopsin gene, partial cds DQ203618 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTGATCACAGTGCCATTGCTGATGGTTGAGTTCTATCTCATCCTGCGGGCCATTGGCAACGTGTCCGGTGGTATCTTCTGGCGTCTGATGATCGGTACACTGGTCATGCTTGTCGGCGGATATGCCGGTGAAATCGGCTATATCAACGTATGGCTTGGTTTCATCATCGGAATGGCCGGTTGGGCCTACATTCTGTATGAGATCTTTGCTGGTGAAGCTGGCAAGATGTCAGCAGATCAGGCTCCGGAGTCTGTCAAGGCTGCATTCTCGACAATGCGCTGGATTGTGACAATCGGTTGGGCCATCTATCCA RYIDWLITVPLLMVEFYLILRAIGNVSGGIFWRLMIGTLVMLVGGYAGEIGYINVWLGFIIGMAGWAYILYEIFAGEAGKMSADQAPESVKAAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTGATCACAGTGCCATTGCTGATGGTTGAGTTCTATCTCATCCTGCGGGCC---------ATT---GGCAACGTGTCCGGT---GGTATC------------------------------------TTCTGGCGT---CTGATGATCGGTACACTGGTCATGCTTGTCGGCGGATATGCCGGTGAA---------ATC------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AACGTA------------------TGGCTTGGT---TTCATCATCGGAATGGCCGGTTGGGCCTACATTCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGATGTCAGCAGAT------CAG---GCTCCGGAGTCTGTC---AAG---GCT---GCA---TTC---TCG---ACAATG---CGCTGGATTGTGACAATC---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYLILRA---I-GNVSG-GI------------FWR-LMIGTLVMLVGGYAGE---I------G--Y-----------I----------------------NV------WLG-FIIGMAGWAYILYEI-----F--A-GEAGKMSAD--Q-APESV-K-A-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha6-a]_DQ203344 [III-Alpha6-a] MedHO102A12_env_samples_DQ203344 gi|77547136|gb|DQ203344| Uncultured bacterium clone MedHO102A12 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102A12 predicted proteorhodopsin gene, partial cds DQ203344 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGGTACATTGATTGGCTGATCACAGTGCCATTGTTGATGGTTGAGTTCTATCTCATCCTGCGGGCCATTGGAGAAGTATCCGGCGGCATTTTCTGGCGCTTGATGATTGGTACATTGATCATGCTGGTCGGCGGATATGCTGGTGAGGTTGGCTACATTAATGAGTGGCTCGGCTTCATCATCGGAATGGCCGGTTGGGCCTACATCCTTTATGAGGTCTTTGCTGGTGAAGCTGGCAAGATGTCAGCGGATCAGGCTCCCGAGTCTGTGAAGTCTGCATTCTCAACAATGCGCTGGATTGTAACAATCGGTTGGGCCATATATCCA RYIDWLITVPLLMVEFYLILRAIGEVSGGIFWRLMIGTLIMLVGGYAGEVGYINEWLGFIIGMAGWAYILYEVFAGEAGKMSADQAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTACATTGATTGG------------------------CTGATCACAGTGCCATTGTTGATGGTTGAGTTCTATCTCATCCTGCGGGCC---------ATT---GGAGAAGTATCCGGC---GGCATT------------------------------------TTCTGGCGC---TTGATGATTGGTACATTGATCATGCTGGTCGGCGGATATGCTGGTGAG---------GTT------------------GGC------TAC---------------------------------ATT------------------------------------------------------------------AATGAG------------------TGGCTCGGC---TTCATCATCGGAATGGCCGGTTGGGCCTACATCCTTTATGAGGTC---------------TTT------GCT---GGTGAAGCTGGCAAGATGTCAGCGGAT------CAG---GCTCCCGAGTCTGTG---AAG---TCT---GCA---TTC---TCA---ACAATG---CGCTGGATTGTAACAATC---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYLILRA---I-GEVSG-GI------------FWR-LMIGTLIMLVGGYAGE---V------G--Y-----------I----------------------NE------WLG-FIIGMAGWAYILYEV-----F--A-GEAGKMSAD--Q-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha6-a]_DQ203354 [III-Alpha6-a] MedHO102B12_env_samples_DQ203354 gi|77547156|gb|DQ203354| Uncultured bacterium clone MedHO102B12 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102B12 predicted proteorhodopsin gene, partial cds DQ203354 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGGTACATTGATTGGCTGATCACAGTGCCATTGTTGATGGTTGAGTTCTATCTCATCCTGCGGGCCATTGGAGAAGTATCCGGCGGCATTTTCTGGCGCTTGATGATTGGTACATTGATCATGCTGGTCGGCGGATATGCTGGTGAGGTTGGCTACATTAATGAGTGGCTCGGCTTCATCATCGGAATGGCCGGTTGGGCCTACATCCTTTATGAGGTCTTTGCTGGTGAAGCTGGCAAGATGTCAGCGGATCAGGCTCCCGAGTCTGTGAAGTCTGCATTCTCAACAATGCGCTGGATTGTAACAATCGGTTGGGCCATATATCCA RYIDWLITVPLLMVEFYLILRAIGEVSGGIFWRLMIGTLIMLVGGYAGEVGYINEWLGFIIGMAGWAYILYEVFAGEAGKMSADQAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTACATTGATTGG------------------------CTGATCACAGTGCCATTGTTGATGGTTGAGTTCTATCTCATCCTGCGGGCC---------ATT---GGAGAAGTATCCGGC---GGCATT------------------------------------TTCTGGCGC---TTGATGATTGGTACATTGATCATGCTGGTCGGCGGATATGCTGGTGAG---------GTT------------------GGC------TAC---------------------------------ATT------------------------------------------------------------------AATGAG------------------TGGCTCGGC---TTCATCATCGGAATGGCCGGTTGGGCCTACATCCTTTATGAGGTC---------------TTT------GCT---GGTGAAGCTGGCAAGATGTCAGCGGAT------CAG---GCTCCCGAGTCTGTG---AAG---TCT---GCA---TTC---TCA---ACAATG---CGCTGGATTGTAACAATC---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYLILRA---I-GEVSG-GI------------FWR-LMIGTLIMLVGGYAGE---V------G--Y-----------I----------------------NE------WLG-FIIGMAGWAYILYEV-----F--A-GEAGKMSAD--Q-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha6-a]_DQ203531 [III-Alpha6-a] MedHO1202D3_env_samples_DQ203531 gi|77547510|gb|DQ203531| Uncultured bacterium clone MedHO1202D3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202D3 predicted proteorhodopsin gene, partial cds DQ203531 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGATTGGCTGATCACAGTGCCATTGTTGATGGTTGAGTTCTATCTCATCCTGCGGGCCATTGGAGAAGTATCTGGCGGCATTTTCTGGCGCTTGATGATTGGTACATTGATCATGCTGGTCGGCGGATATGCTGGTGAGGTTGGCTACATTAATGAGTGGCTCGGCTTCATCATCGGAATGGCCGGTTGGGCCTACATCCTTTATGAGGTCTTTGCTGGTGAAGCTGGCAAGATGTCAGCGGATCAGGCTCCCGAGTCTGTGAAGTCTGCATTCTCAACAATGCGCTGGATTGTAACAATCGGTTGGGCAATTTACCCA SYIDWLITVPLLMVEFYLILRAIGEVSGGIFWRLMIGTLIMLVGGYAGEVGYINEWLGFIIGMAGWAYILYEVFAGEAGKMSADQAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGATTGG------------------------CTGATCACAGTGCCATTGTTGATGGTTGAGTTCTATCTCATCCTGCGGGCC---------ATT---GGAGAAGTATCTGGC---GGCATT------------------------------------TTCTGGCGC---TTGATGATTGGTACATTGATCATGCTGGTCGGCGGATATGCTGGTGAG---------GTT------------------GGC------TAC---------------------------------ATT------------------------------------------------------------------AATGAG------------------TGGCTCGGC---TTCATCATCGGAATGGCCGGTTGGGCCTACATCCTTTATGAGGTC---------------TTT------GCT---GGTGAAGCTGGCAAGATGTCAGCGGAT------CAG---GCTCCCGAGTCTGTG---AAG---TCT---GCA---TTC---TCA---ACAATG---CGCTGGATTGTAACAATC---------------------------------------------------------------GGTTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMVEFYLILRA---I-GEVSG-GI------------FWR-LMIGTLIMLVGGYAGE---V------G--Y-----------I----------------------NE------WLG-FIIGMAGWAYILYEV-----F--A-GEAGKMSAD--Q-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha6-a]_DQ203492 [III-Alpha6-a] MedHO1202A10_env_samples_DQ203492 gi|77547432|gb|DQ203492| Uncultured bacterium clone MedHO1202A10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202A10 predicted proteorhodopsin gene, partial cds DQ203492 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGATTGGTTGATCACAGTGCCATTGCTGATGGTTGAGTTCTATCTCATCCTGCGGGCCATTGGAGAAGTATCTGGCGGCATTTTCTGGCGCTTGATGATTGGTACATTGATCATGCTGGTCGGCGGATATGCTGGTGAGGTTGGCTACATTAATGAGTGGCTCGGCTTCATCATCGGAATGGCCGGTTGGGCCTACGTCCTTTATGAGGTCTTTGCTGGTGAAGCTGGCAAGATGTCAGCGGATCAGGCTCCCGAGTCTGTCAAGTCTGCATTCTCAACAATGCGCTGGATTGTAACAATCGGTTGGGCCATTTATCCA SYIDWLITVPLLMVEFYLILRAIGEVSGGIFWRLMIGTLIMLVGGYAGEVGYINEWLGFIIGMAGWAYVLYEVFAGEAGKMSADQAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGATTGG------------------------TTGATCACAGTGCCATTGCTGATGGTTGAGTTCTATCTCATCCTGCGGGCC---------ATT---GGAGAAGTATCTGGC---GGCATT------------------------------------TTCTGGCGC---TTGATGATTGGTACATTGATCATGCTGGTCGGCGGATATGCTGGTGAG---------GTT------------------GGC------TAC---------------------------------ATT------------------------------------------------------------------AATGAG------------------TGGCTCGGC---TTCATCATCGGAATGGCCGGTTGGGCCTACGTCCTTTATGAGGTC---------------TTT------GCT---GGTGAAGCTGGCAAGATGTCAGCGGAT------CAG---GCTCCCGAGTCTGTC---AAG---TCT---GCA---TTC---TCA---ACAATG---CGCTGGATTGTAACAATC---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMVEFYLILRA---I-GEVSG-GI------------FWR-LMIGTLIMLVGGYAGE---V------G--Y-----------I----------------------NE------WLG-FIIGMAGWAYVLYEV-----F--A-GEAGKMSAD--Q-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha6-a]_DQ203502 [III-Alpha6-a] MedHO1202A9_env_samples_DQ203502 gi|77547452|gb|DQ203502| Uncultured bacterium clone MedHO1202A9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202A9 predicted proteorhodopsin gene, partial cds DQ203502 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGATTGGTTGATCACAGTGCCATTGCTGATGGTTGAGTTCTATCTCATCCTGCGGGCCATTGGAGAAGTATCTGGCGGCATTTTCTGGCGCTTGATGATTGGTACATTGATCATGCTGGTCGGCGGATATGCTGGTGAGGTTGGCTACATTAATGAGTGGCTCGGCTTCATCATCGGAATGGCCGGTTGGGCCTACGTCCTTTATGAGGTCTTTGCTGGTGAAGCTGGCAAGATGTCAGCGGATCAGGCTCCCGAGTCTGTCAAGTCTGCATTCTCAACAATGCGCTGGATTGTAACAATCGGTTGGGCCATTTATCCA SYIDWLITVPLLMVEFYLILRAIGEVSGGIFWRLMIGTLIMLVGGYAGEVGYINEWLGFIIGMAGWAYVLYEVFAGEAGKMSADQAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGATTGG------------------------TTGATCACAGTGCCATTGCTGATGGTTGAGTTCTATCTCATCCTGCGGGCC---------ATT---GGAGAAGTATCTGGC---GGCATT------------------------------------TTCTGGCGC---TTGATGATTGGTACATTGATCATGCTGGTCGGCGGATATGCTGGTGAG---------GTT------------------GGC------TAC---------------------------------ATT------------------------------------------------------------------AATGAG------------------TGGCTCGGC---TTCATCATCGGAATGGCCGGTTGGGCCTACGTCCTTTATGAGGTC---------------TTT------GCT---GGTGAAGCTGGCAAGATGTCAGCGGAT------CAG---GCTCCCGAGTCTGTC---AAG---TCT---GCA---TTC---TCA---ACAATG---CGCTGGATTGTAACAATC---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMVEFYLILRA---I-GEVSG-GI------------FWR-LMIGTLIMLVGGYAGE---V------G--Y-----------I----------------------NE------WLG-FIIGMAGWAYVLYEV-----F--A-GEAGKMSAD--Q-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha6-a]_DQ203396 [III-Alpha6-a] MedHO102E8_env_samples_DQ203396 gi|77547240|gb|DQ203396| Uncultured bacterium clone MedHO102E8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102E8 predicted proteorhodopsin gene, partial cds DQ203396 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATCGATTGGCTGACCACAGTGCCATTGCTGATGGTTGAGTTCTATCTCATCCTGCGGGCCATTGGAGAAGTATCTGGCGGCATTTTCTGGCGCTTGATGATTGGTACATTGATCATGCTGGTCGGCGGATATGCTGGTGAGGTTGGCTACATTAATGAGTGGCTCGGCTTCATCATCGGAATGGCCGGTTGGGCCTACATCCTTTATGAGGTCTTTGCTGGTGAAGCTGGCAGGATGTCAGCGGATCAGGCTCCCGAGTCTGTCAAGTCTGCATTCTCAACAATGCGCTGGATTGTAACAATCGGTTGGGCCATCTATCCA SYIDWLTTVPLLMVEFYLILRAIGEVSGGIFWRLMIGTLIMLVGGYAGEVGYINEWLGFIIGMAGWAYILYEVFAGEAGRMSADQAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATCGATTGG------------------------CTGACCACAGTGCCATTGCTGATGGTTGAGTTCTATCTCATCCTGCGGGCC---------ATT---GGAGAAGTATCTGGC---GGCATT------------------------------------TTCTGGCGC---TTGATGATTGGTACATTGATCATGCTGGTCGGCGGATATGCTGGTGAG---------GTT------------------GGC------TAC---------------------------------ATT------------------------------------------------------------------AATGAG------------------TGGCTCGGC---TTCATCATCGGAATGGCCGGTTGGGCCTACATCCTTTATGAGGTC---------------TTT------GCT---GGTGAAGCTGGCAGGATGTCAGCGGAT------CAG---GCTCCCGAGTCTGTC---AAG---TCT---GCA---TTC---TCA---ACAATG---CGCTGGATTGTAACAATC---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LTTVPLLMVEFYLILRA---I-GEVSG-GI------------FWR-LMIGTLIMLVGGYAGE---V------G--Y-----------I----------------------NE------WLG-FIIGMAGWAYILYEV-----F--A-GEAGRMSAD--Q-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha6-a]_DQ203503 [III-Alpha6-a] MedHO1202B1_env_samples_DQ203503 gi|77547454|gb|DQ203503| Uncultured bacterium clone MedHO1202B1 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202B1 predicted proteorhodopsin gene, partial cds DQ203503 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGATTGGCTGATCACAGTGCCATTGTTGATGGTTGAGTTCTATCTCATCCTGCGGGCCATTGGAGAAGTATCTGGCGGCATTTTCTGGCGCTTGATGATTGGTACATTGATCATGCTGGTCGGCGGATATGCTGGTGAGGTTGGCTACATTAATGAGTGGCTCGGCTTCATCATCGGAATGGCCGGTTGGGCCTACATCCTTTATGAGGTCTTTGCTGGTGAAGCTGGCAAGATGTCAGCGGATCAGGCTCCCGAGTCTGTCAAGTCTGCATTCTCAACAATGCGCTGGATTGTAACAATCGGGTGGGCCATTTATCCA SYIDWLITVPLLMVEFYLILRAIGEVSGGIFWRLMIGTLIMLVGGYAGEVGYINEWLGFIIGMAGWAYILYEVFAGEAGKMSADQAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGATTGG------------------------CTGATCACAGTGCCATTGTTGATGGTTGAGTTCTATCTCATCCTGCGGGCC---------ATT---GGAGAAGTATCTGGC---GGCATT------------------------------------TTCTGGCGC---TTGATGATTGGTACATTGATCATGCTGGTCGGCGGATATGCTGGTGAG---------GTT------------------GGC------TAC---------------------------------ATT------------------------------------------------------------------AATGAG------------------TGGCTCGGC---TTCATCATCGGAATGGCCGGTTGGGCCTACATCCTTTATGAGGTC---------------TTT------GCT---GGTGAAGCTGGCAAGATGTCAGCGGAT------CAG---GCTCCCGAGTCTGTC---AAG---TCT---GCA---TTC---TCA---ACAATG---CGCTGGATTGTAACAATC---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMVEFYLILRA---I-GEVSG-GI------------FWR-LMIGTLIMLVGGYAGE---V------G--Y-----------I----------------------NE------WLG-FIIGMAGWAYILYEV-----F--A-GEAGKMSAD--Q-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha6-a]_DQ203579 [III-Alpha6-a] MedHO1202H7_env_samples_DQ203579 gi|77547606|gb|DQ203579| Uncultured bacterium clone MedHO1202H7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202H7 predicted proteorhodopsin gene, partial cds DQ203579 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATCGACTGGCTGATCACAGTGCCATTGTTGATGGTTGAGTTCTATCTCATCCTGCGGGCCATTGGAGAAGTATCTGGCGGCATTTTCTGGCGCTTGATGATTGGTACATTGATCATGCTGGTCGGCGGATATGCTGGTGAGGTTGGCTACATTAATGAGTGGCTCGGCTTCATCATCGGAATGGCCGGTTGGGCCTACATCCTTTATGAGGTCTTTGCTGGTGAAGCTGGCAAGATGTCAGCGGATCAGGCTCCCGAGTCTGTCAAGTCTGCATTCTCAACAATGCGCTGGATTGTAACAATCGGGTGGGCCATTTATCCA SYIDWLITVPLLMVEFYLILRAIGEVSGGIFWRLMIGTLIMLVGGYAGEVGYINEWLGFIIGMAGWAYILYEVFAGEAGKMSADQAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATCGACTGG------------------------CTGATCACAGTGCCATTGTTGATGGTTGAGTTCTATCTCATCCTGCGGGCC---------ATT---GGAGAAGTATCTGGC---GGCATT------------------------------------TTCTGGCGC---TTGATGATTGGTACATTGATCATGCTGGTCGGCGGATATGCTGGTGAG---------GTT------------------GGC------TAC---------------------------------ATT------------------------------------------------------------------AATGAG------------------TGGCTCGGC---TTCATCATCGGAATGGCCGGTTGGGCCTACATCCTTTATGAGGTC---------------TTT------GCT---GGTGAAGCTGGCAAGATGTCAGCGGAT------CAG---GCTCCCGAGTCTGTC---AAG---TCT---GCA---TTC---TCA---ACAATG---CGCTGGATTGTAACAATC---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMVEFYLILRA---I-GEVSG-GI------------FWR-LMIGTLIMLVGGYAGE---V------G--Y-----------I----------------------NE------WLG-FIIGMAGWAYILYEV-----F--A-GEAGKMSAD--Q-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha6-a]_KJ926117 [III-Alpha6-a] BOUM_OTU030_env_samples gb|KJ926117| Uncultured bacterium clone BOUM OTU030 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU030 putative proteorhodopsin gene, partial cds KJ926117 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 34.185167 22.161 #na #na #na #na #na GTAGACTGGCTGATCACAGTGCCATTGTTGATGGTTGAGTTCTATCTCATCCTGCGGGCCATTGGAGAAGTATCTGGCGGCATTTTCTGGCGCTTGATGATTGGTACATTGATCATGCTGGTCGGCGGATATGCTGGTGAGGTTGGCTACATCAATGAGTGGCTCGGCTTCATCATCGGAATGGCCGGTTGGGCCTACATCCTTTATGAGGTCTTTGCTGGTGAAGCTGGCAAGATGTCAGCGGATCAGGCTCCCGAGTCTGTCAAGTCTGCATTCTCAACAATGCGCTGGATTGTAACAATTGGCTGGGCTATCTAC VDWLITVPLLMVEFYLILRAIGEVSGGIFWRLMIGTLIMLVGGYAGEVGYINEWLGFIIGMAGWAYILYEVFAGEAGKMSADQAPESVKSAFSTMRWIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGACTGG------------------------CTGATCACAGTGCCATTGTTGATGGTTGAGTTCTATCTCATCCTGCGGGCC---------ATT---GGAGAAGTATCTGGC---GGCATT------------------------------------TTCTGGCGC---TTGATGATTGGTACATTGATCATGCTGGTCGGCGGATATGCTGGTGAG---------GTT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGAG------------------TGGCTCGGC---TTCATCATCGGAATGGCCGGTTGGGCCTACATCCTTTATGAGGTC---------------TTT------GCT---GGTGAAGCTGGCAAGATGTCAGCGGAT------CAG---GCTCCCGAGTCTGTC---AAG---TCT---GCA---TTC---TCA---ACAATG---CGCTGGATTGTAACAATT---------------------------------------------------------------GGCTGG---------GCTATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPLLMVEFYLILRA---I-GEVSG-GI------------FWR-LMIGTLIMLVGGYAGE---V------G--Y-----------I----------------------NE------WLG-FIIGMAGWAYILYEV-----F--A-GEAGKMSAD--Q-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Alpha6-a]_DQ203482 [III-Alpha6-a] medHO10G5_env_samples_DQ203482 gi|77547412|gb|DQ203482| Uncultured bacterium clone medHO10G5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10G5 predicted proteorhodopsin gene, partial cds DQ203482 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATCGATTGGCTGATCACAGTGCCATTGTTGATGGTTGAGTTCTATCTCATCCTGCGGGCCATTGGAGAAGTATCTGGCGGCATTTTCTGGCGCTTGATGATTGGTACATTGATCATGCTGGTCGGCGGATATGCTGGTGAGGTTGGCTACATCAATGAGTGGCTCGGCTTCATCATCGGAATGGCCGGTTGGGCCTACATCCTTTATGAGGTGTTTGCTGGTGAAGCTGGGAAGATGTCAGCGGATCAGGCTCCCGAGTCTGTCAAGTCTGCATTCTCAACAATGCGCTGGATTGTAACAATTGGGTGGGCCATCTACCCA SYIDWLITVPLLMVEFYLILRAIGEVSGGIFWRLMIGTLIMLVGGYAGEVGYINEWLGFIIGMAGWAYILYEVFAGEAGKMSADQAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATCGATTGG------------------------CTGATCACAGTGCCATTGTTGATGGTTGAGTTCTATCTCATCCTGCGGGCC---------ATT---GGAGAAGTATCTGGC---GGCATT------------------------------------TTCTGGCGC---TTGATGATTGGTACATTGATCATGCTGGTCGGCGGATATGCTGGTGAG---------GTT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGAG------------------TGGCTCGGC---TTCATCATCGGAATGGCCGGTTGGGCCTACATCCTTTATGAGGTG---------------TTT------GCT---GGTGAAGCTGGGAAGATGTCAGCGGAT------CAG---GCTCCCGAGTCTGTC---AAG---TCT---GCA---TTC---TCA---ACAATG---CGCTGGATTGTAACAATT---------------------------------------------------------------GGGTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMVEFYLILRA---I-GEVSG-GI------------FWR-LMIGTLIMLVGGYAGE---V------G--Y-----------I----------------------NE------WLG-FIIGMAGWAYILYEV-----F--A-GEAGKMSAD--Q-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha6-a]_DQ203346 [III-Alpha6-a] MedHO102A3_env_samples_DQ203346 gi|77547140|gb|DQ203346| Uncultured bacterium clone MedHO102A3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102A3 predicted proteorhodopsin gene, partial cds DQ203346 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTGATCACAGTGCCATTGTTGATGGTTGAGTTCTATCTCATCCTGCGGGCCATTGGAGAAGTATCTGGCGGCATTTTCTGGCGCTTGATGATTGGTACATTGATCATGCTGGTCGGCGGATATGCTGGTGAGGTTGGCTACATCAATGAGTGGCTTGGCTTCATCATCGGAATGGCCGGTTGGGCCTACATCCTTTATGAGGTCTTTGCTGGTGAAGCTGGCAAGATGTCAGCGGATCAGGCTCCCGAGTCTGTCAAGTCTGCATTCTCAACAATGCGCTGGATTGTAACAATTGGGTGGGCCATTTATCCA RYIDWLITVPLLMVEFYLILRAIGEVSGGIFWRLMIGTLIMLVGGYAGEVGYINEWLGFIIGMAGWAYILYEVFAGEAGKMSADQAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTGATCACAGTGCCATTGTTGATGGTTGAGTTCTATCTCATCCTGCGGGCC---------ATT---GGAGAAGTATCTGGC---GGCATT------------------------------------TTCTGGCGC---TTGATGATTGGTACATTGATCATGCTGGTCGGCGGATATGCTGGTGAG---------GTT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGAG------------------TGGCTTGGC---TTCATCATCGGAATGGCCGGTTGGGCCTACATCCTTTATGAGGTC---------------TTT------GCT---GGTGAAGCTGGCAAGATGTCAGCGGAT------CAG---GCTCCCGAGTCTGTC---AAG---TCT---GCA---TTC---TCA---ACAATG---CGCTGGATTGTAACAATT---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYLILRA---I-GEVSG-GI------------FWR-LMIGTLIMLVGGYAGE---V------G--Y-----------I----------------------NE------WLG-FIIGMAGWAYILYEV-----F--A-GEAGKMSAD--Q-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha6-a]_DQ203438 [III-Alpha6-a] medHO10A4_env_samples_DQ203438 gi|77547324|gb|DQ203438| Uncultured bacterium clone medHO10A4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10A4 predicted proteorhodopsin gene, partial cds DQ203438 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTGATCACAGTGCCATTGTTGATGGTTGAGTTCTATCTCATCCTGCGGGCCATTGGAGAAGTATCTGGCGGCATTTTCTGGCGCTTGATGATTGGTACATTGATCATGCTGGTCGGCGGATACGCTGGTGAGGTTGGCTACATCAATGAGTGGCTCGGCTTCATCATCGGAATGGCCGGTTGGGCCTACATCCTTTATGAGGTCTTTGCTGGTGAAGCTGGCAAGATGTCAGCGGATCAGGCTCCCGAGTCTGTCAAGTCTGCATTCTCAACAATGCGCTGGATTGTAACAATTGGGTGGGCCATCTATCCA RYIDWLITVPLLMVEFYLILRAIGEVSGGIFWRLMIGTLIMLVGGYAGEVGYINEWLGFIIGMAGWAYILYEVFAGEAGKMSADQAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTGATCACAGTGCCATTGTTGATGGTTGAGTTCTATCTCATCCTGCGGGCC---------ATT---GGAGAAGTATCTGGC---GGCATT------------------------------------TTCTGGCGC---TTGATGATTGGTACATTGATCATGCTGGTCGGCGGATACGCTGGTGAG---------GTT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGAG------------------TGGCTCGGC---TTCATCATCGGAATGGCCGGTTGGGCCTACATCCTTTATGAGGTC---------------TTT------GCT---GGTGAAGCTGGCAAGATGTCAGCGGAT------CAG---GCTCCCGAGTCTGTC---AAG---TCT---GCA---TTC---TCA---ACAATG---CGCTGGATTGTAACAATT---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYLILRA---I-GEVSG-GI------------FWR-LMIGTLIMLVGGYAGE---V------G--Y-----------I----------------------NE------WLG-FIIGMAGWAYILYEV-----F--A-GEAGKMSAD--Q-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha6-a]_DQ203489 [III-Alpha6-a] medHO1201_env_samples_DQ203489 gi|77547426|gb|DQ203489| Uncultured bacterium clone medHO1201 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO1201 predicted proteorhodopsin gene, partial cds DQ203489 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTGATCACAGTGCCATTGTTGATGGTTGAGTTCTATCTCATCCTGCGGGCCATTGGAGAAGTATCTGGCGGCATTTTCTGGCGCTTGATGATTGGTACATTGATCATGCTGGTCGGCGGATATGCTGGTGAGGTTGGCTACATTAATGAGTGGCTCGGCTTCATCATCGGAATGGCCGGTTGGGCCTACATCCTTTATGAGGTCTTTGCTGGTGAAGCTGGCAAGATGTCAGCGGATCAGGCTCCCGAGTCTGTCAAGTCTGCATTCTCAACAATGCGCTGGATTGTAACAATCGGGTGGGCCATCTATCTA RYIDWLITVPLLMVEFYLILRAIGEVSGGIFWRLMIGTLIMLVGGYAGEVGYINEWLGFIIGMAGWAYILYEVFAGEAGKMSADQAPESVKSAFSTMRWIVTIGWAIYL ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTGATCACAGTGCCATTGTTGATGGTTGAGTTCTATCTCATCCTGCGGGCC---------ATT---GGAGAAGTATCTGGC---GGCATT------------------------------------TTCTGGCGC---TTGATGATTGGTACATTGATCATGCTGGTCGGCGGATATGCTGGTGAG---------GTT------------------GGC------TAC---------------------------------ATT------------------------------------------------------------------AATGAG------------------TGGCTCGGC---TTCATCATCGGAATGGCCGGTTGGGCCTACATCCTTTATGAGGTC---------------TTT------GCT---GGTGAAGCTGGCAAGATGTCAGCGGAT------CAG---GCTCCCGAGTCTGTC---AAG---TCT---GCA---TTC---TCA---ACAATG---CGCTGGATTGTAACAATC---------------------------------------------------------------GGGTGG---------GCCATCTATCTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYLILRA---I-GEVSG-GI------------FWR-LMIGTLIMLVGGYAGE---V------G--Y-----------I----------------------NE------WLG-FIIGMAGWAYILYEV-----F--A-GEAGKMSAD--Q-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYL-------------------------------------------------------------------------------------------------- [III-Alpha6-a]_DQ203393 [III-Alpha6-a] MedHO102E5_env_samples_DQ203393 gi|77547234|gb|DQ203393| Uncultured bacterium clone MedHO102E5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102E5 predicted proteorhodopsin gene, partial cds DQ203393 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTGATCACAGTGCCATTGTTGATGGTTGAGTTCTATCTCATCCTGCGGGCCATTGGAGAAGTATCTGGCGGCATTTTCTGGCGCTTGATGATTGGTACATTGGTCATGCTGGTCGGCGGATATGCTGGTGAGGTTGGCTACATCAATGAGTGGCTCGGCTTCATCATCGGAATGGCCGGTTGGGCCTACATCCTGTATGAGGTCTTTGCTGGTGAAGCTGGCAAGATGTCAGCGGATCAGGCTCCTGAGTCCGTCAAGTCTGCATTCTCAACAATGCGCTGGATTGTAACAATCGGGTGGGCCATATATCCA RYIDWLITVPLLMVEFYLILRAIGEVSGGIFWRLMIGTLVMLVGGYAGEVGYINEWLGFIIGMAGWAYILYEVFAGEAGKMSADQAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTGATCACAGTGCCATTGTTGATGGTTGAGTTCTATCTCATCCTGCGGGCC---------ATT---GGAGAAGTATCTGGC---GGCATT------------------------------------TTCTGGCGC---TTGATGATTGGTACATTGGTCATGCTGGTCGGCGGATATGCTGGTGAG---------GTT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGAG------------------TGGCTCGGC---TTCATCATCGGAATGGCCGGTTGGGCCTACATCCTGTATGAGGTC---------------TTT------GCT---GGTGAAGCTGGCAAGATGTCAGCGGAT------CAG---GCTCCTGAGTCCGTC---AAG---TCT---GCA---TTC---TCA---ACAATG---CGCTGGATTGTAACAATC---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYLILRA---I-GEVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------NE------WLG-FIIGMAGWAYILYEV-----F--A-GEAGKMSAD--Q-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha6-a]_DQ203415 [III-Alpha6-a] MedHO102G5_env_samples_DQ203415 gi|77547278|gb|DQ203415| Uncultured bacterium clone MedHO102G5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102G5 predicted proteorhodopsin gene, partial cds DQ203415 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTTATCACAGTGCCATTGTTGATGGTTGAGTTCTATCTCATCCTGCGGGCCATTGGAGAAGTATCTGGCGGCATTTTCTGGCGCTTGATGATTGGTACATTGGTCATGCTGGTCGGCGGATATGCTGGTGAGGTTGGCTACATCAATGAGTGGCTCGGCTTCATCATCGGAATGGCCGGTTGGGCCTACATCCTGTATGAGGTCTTTGCTGGTGAAGCTGGCAAGATGTCAGCGGATCAGGCTCCTGAGTCCGTCAAGTCTGCGTTCTCAACAATGCGCTGGATTGTAACAATCGGGTGGGCCATATATCCA RYIDWLITVPLLMVEFYLILRAIGEVSGGIFWRLMIGTLVMLVGGYAGEVGYINEWLGFIIGMAGWAYILYEVFAGEAGKMSADQAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTTATCACAGTGCCATTGTTGATGGTTGAGTTCTATCTCATCCTGCGGGCC---------ATT---GGAGAAGTATCTGGC---GGCATT------------------------------------TTCTGGCGC---TTGATGATTGGTACATTGGTCATGCTGGTCGGCGGATATGCTGGTGAG---------GTT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGAG------------------TGGCTCGGC---TTCATCATCGGAATGGCCGGTTGGGCCTACATCCTGTATGAGGTC---------------TTT------GCT---GGTGAAGCTGGCAAGATGTCAGCGGAT------CAG---GCTCCTGAGTCCGTC---AAG---TCT---GCG---TTC---TCA---ACAATG---CGCTGGATTGTAACAATC---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYLILRA---I-GEVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------NE------WLG-FIIGMAGWAYILYEV-----F--A-GEAGKMSAD--Q-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha6-a]_DQ203447 [III-Alpha6-a] medHO10B2_env_samples_DQ203447 gi|77547342|gb|DQ203447| Uncultured bacterium clone medHO10B2 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10B2 predicted proteorhodopsin gene, partial cds DQ203447 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATAGATTGGCTGATCACAGTGCCATTGTTGATGGTTGAGTTCTATCTCATCCTGCGGGCCATTGGAGAAGTATCTGGCGGTATTTTCTGGCGCTTGATGATTGGTACATTGGTCATGCTGGTCGGCGGATATGCTGGTGAGGTTGGCTACATCAATGAGTGGCTCGGCTTCATCATCGGAATGGCCGGTTGGGCCTACATCCTGTATGAGGTCTTTGCTGGTGAAGCTGGCAAGATGTCAGCGGATCAGGCTCCTGAGTCCGTCAAGTCTGCATTCTCAACAATGCGCTGGATTGTAACAATCGGGTGGGCCATATATCCA RYIDWLITVPLLMVEFYLILRAIGEVSGGIFWRLMIGTLVMLVGGYAGEVGYINEWLGFIIGMAGWAYILYEVFAGEAGKMSADQAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGATTGG------------------------CTGATCACAGTGCCATTGTTGATGGTTGAGTTCTATCTCATCCTGCGGGCC---------ATT---GGAGAAGTATCTGGC---GGTATT------------------------------------TTCTGGCGC---TTGATGATTGGTACATTGGTCATGCTGGTCGGCGGATATGCTGGTGAG---------GTT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGAG------------------TGGCTCGGC---TTCATCATCGGAATGGCCGGTTGGGCCTACATCCTGTATGAGGTC---------------TTT------GCT---GGTGAAGCTGGCAAGATGTCAGCGGAT------CAG---GCTCCTGAGTCCGTC---AAG---TCT---GCA---TTC---TCA---ACAATG---CGCTGGATTGTAACAATC---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYLILRA---I-GEVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------NE------WLG-FIIGMAGWAYILYEV-----F--A-GEAGKMSAD--Q-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha6-a]_DQ203355 [III-Alpha6-a] MedHO102B2_env_samples_DQ203355 gi|77547158|gb|DQ203355| Uncultured bacterium clone MedHO102B2 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102B2 predicted proteorhodopsin gene, partial cds DQ203355 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGATTGGCTGATCACAGTGCCATTGTTGATGGTTGAGTTCTATCTCATCCTGCGAGCCATTGGAGAAGTATCTGGCGGCATTTTCTGGCGCTTGATGATTGGTACATTGGTCATGCTGGTCGGCGGATATGCTGGTGAGGTTGGCTACATCAATGAGTGGCTCGGCTTCATCATCGGAATGGCCGGTTGGGCCTACATCCTGTATGAGGTCTTTGCTGGTGAAGCTGGCAAAATGTCAGCGGATCAGGCTCCTGAGTCCGTCAAGTCTGCATTCTCAACAATGCGCTGGATTGTAACAATCGGGTGGGCCATATATCCA RYIDWLITVPLLMVEFYLILRAIGEVSGGIFWRLMIGTLVMLVGGYAGEVGYINEWLGFIIGMAGWAYILYEVFAGEAGKMSADQAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGATTGG------------------------CTGATCACAGTGCCATTGTTGATGGTTGAGTTCTATCTCATCCTGCGAGCC---------ATT---GGAGAAGTATCTGGC---GGCATT------------------------------------TTCTGGCGC---TTGATGATTGGTACATTGGTCATGCTGGTCGGCGGATATGCTGGTGAG---------GTT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGAG------------------TGGCTCGGC---TTCATCATCGGAATGGCCGGTTGGGCCTACATCCTGTATGAGGTC---------------TTT------GCT---GGTGAAGCTGGCAAAATGTCAGCGGAT------CAG---GCTCCTGAGTCCGTC---AAG---TCT---GCA---TTC---TCA---ACAATG---CGCTGGATTGTAACAATC---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYLILRA---I-GEVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------NE------WLG-FIIGMAGWAYILYEV-----F--A-GEAGKMSAD--Q-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha6-a]_KJ926215 [III-Alpha6-a] RHOMEO_AG_OTU29 gb|KJ926215| Uncultured bacterium cloneRHOMEO AG OTU29 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU29 putative proteorhodopsin gene, partial cds KJ926215 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGCTGATCACAGTGCCATTGTTGATGGTTGAGTTCTATCTCATCCTGCGGGCCATTGGAGAAGTATCTGGCGGCATTTTCTGGCGCTTGATGATTGGTACATTGGTCATGCTGGTCGGCGGATATGCTGGTGAGGTTGGCTACATCAATGAGTGGCTCGGCTTCATCATCGGAATGGCCGGTTGGGCCTACATCCTGTATGAGGTCTTTGCTGGTGAAGCTGGCAAGATGTCAGCGGATCAGGCTCCTGAGTCCGTCAAGTCTGCATTCTCAACAATGCGCTGGATTGTAACAATC WLITVPLLMVEFYLILRAIGEVSGGIFWRLMIGTLVMLVGGYAGEVGYINEWLGFIIGMAGWAYILYEVFAGEAGKMSADQAPESVKSAFSTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATCACAGTGCCATTGTTGATGGTTGAGTTCTATCTCATCCTGCGGGCC---------ATT---GGAGAAGTATCTGGC---GGCATT------------------------------------TTCTGGCGC---TTGATGATTGGTACATTGGTCATGCTGGTCGGCGGATATGCTGGTGAG---------GTT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGAG------------------TGGCTCGGC---TTCATCATCGGAATGGCCGGTTGGGCCTACATCCTGTATGAGGTC---------------TTT------GCT---GGTGAAGCTGGCAAGATGTCAGCGGAT------CAG---GCTCCTGAGTCCGTC---AAG---TCT---GCA---TTC---TCA---ACAATG---CGCTGGATTGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYLILRA---I-GEVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------NE------WLG-FIIGMAGWAYILYEV-----F--A-GEAGKMSAD--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-MEDPR46A6]_DQ203359 [III-Alpha6-MEDPR46A6] MedHO102B6_env_samples_DQ203359 gi|77547166|gb|DQ203359| Uncultured bacterium clone MedHO102B6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102B6 predicted proteorhodopsin gene, partial cds DQ203359 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/MEDPR46A6-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 MEDPR46A6-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATAGACTGGCTGATCACCGTGCCACTTCTCATGATCGAGTTCTATCTGATCCTGCGCGCCATCGCGAATGTCTCATCGGGCATTTTCTGGCGTCTGACGATCGGTACGCTGATCATGCTGGTTGGCGGTTATGCGGGTGAAGCGGGCTACATGAATGTGTGGCTTGGTTTCGTCATCGGCATGGTCGGCTGGTTCTACATCCTGTACGAAATCTTCGCTGGTGAAGCCGGCAAGCTTTCGGCAGAGCAGGCACCAGAGTCGGTCAAGTCGGCATTTTCCACCATGCGTTGGATCGTAACCATCGGCTGGGCAATCTACCCA SYIDWLITVPLLMIEFYLILRAIANVSSGIFWRLTIGTLIMLVGGYAGEAGYMNVWLGFVIGMVGWFYILYEIFAGEAGKLSAEQAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATAGACTGG------------------------CTGATCACCGTGCCACTTCTCATGATCGAGTTCTATCTGATCCTGCGCGCC---------ATC---GCGAATGTCTCATCG---GGCATT------------------------------------TTCTGGCGT---CTGACGATCGGTACGCTGATCATGCTGGTTGGCGGTTATGCGGGTGAA---------GCG------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AATGTG------------------TGGCTTGGT---TTCGTCATCGGCATGGTCGGCTGGTTCTACATCCTGTACGAAATC---------------TTC------GCT---GGTGAAGCCGGCAAGCTTTCGGCAGAG------CAG---GCACCAGAGTCGGTC---AAG---TCG---GCA---TTT---TCC---ACCATG---CGTTGGATCGTAACCATC---------------------------------------------------------------GGCTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMIEFYLILRA---I-ANVSS-GI------------FWR-LTIGTLIMLVGGYAGE---A------G--Y-----------M----------------------NV------WLG-FVIGMVGWFYILYEI-----F--A-GEAGKLSAE--Q-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha6-MEDPR46A6]_DQ203366 [III-Alpha6-MEDPR46A6] MedHO102C2_env_samples_DQ203366 gi|77547180|gb|DQ203366| Uncultured bacterium clone MedHO102C2 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102C2 predicted proteorhodopsin gene, partial cds DQ203366 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/MEDPR46A6-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 MEDPR46A6-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTACATAGACTGGCTGATCACCGTGCCACTTCTCATGATCGAGTTCTATCTGATCCTGCGCGCCATCGCGAATGTCTCATCGGGCATTTTCTGGCGTCTGACGATCGGTACGCTGATCATGCTGGTTGGCGGTTATGCGGGTGAAGCGGGCTACATGAATGTGTGGCTTGGTTTCGTCATCGGCATGGTCGGCTGGTTCTACATCCTGTACGAAATCTTCGCTGGTGAAGCCGGCAAGCTTTCGGCAGAGCAGGCACCAGAGTCGGTCAAGTCGGCATTTTCCACCATGCGTTGGATCGTAACCATCGGCTGGGCCATTTACCCA RYIDWLITVPLLMIEFYLILRAIANVSSGIFWRLTIGTLIMLVGGYAGEAGYMNVWLGFVIGMVGWFYILYEIFAGEAGKLSAEQAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATAGACTGG------------------------CTGATCACCGTGCCACTTCTCATGATCGAGTTCTATCTGATCCTGCGCGCC---------ATC---GCGAATGTCTCATCG---GGCATT------------------------------------TTCTGGCGT---CTGACGATCGGTACGCTGATCATGCTGGTTGGCGGTTATGCGGGTGAA---------GCG------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AATGTG------------------TGGCTTGGT---TTCGTCATCGGCATGGTCGGCTGGTTCTACATCCTGTACGAAATC---------------TTC------GCT---GGTGAAGCCGGCAAGCTTTCGGCAGAG------CAG---GCACCAGAGTCGGTC---AAG---TCG---GCA---TTT---TCC---ACCATG---CGTTGGATCGTAACCATC---------------------------------------------------------------GGCTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMIEFYLILRA---I-ANVSS-GI------------FWR-LTIGTLIMLVGGYAGE---A------G--Y-----------M----------------------NV------WLG-FVIGMVGWFYILYEI-----F--A-GEAGKLSAE--Q-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha6-MEDPR46A6]_KJ926116 [III-Alpha6-MEDPR46A6] BOUM_OTU029_env_samples gb|KJ926116| Uncultured bacterium clone BOUM OTU029 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU029 putative proteorhodopsin gene, partial cds KJ926116 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/MEDPR46A6-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 MEDPR46A6-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 34.185167 22.161 #na #na #na #na #na GTTGATTGGCTTATCACTGTTCCGCTTCTCATGATCGAATTCTATCTGATCCTGCGCGCCATCGCGAATGTCTCTTCGGGCATTTTCTGGCGTCTGACGATCGGTACTCTGATCATGCTGGTCGGCGGTTATGCTGGTGAAGCAGGCTACATGAATGTGTGGCTTGGTTTCGTCATCGGCATGGTCGGTTGGTTCTACATCCTGTACGAAATCTTCGCTGGTGAAGCCGGCAAGCTTTCGGCAGAGCAGGCACCAGAGTCGGTCAAGTCGGCATTCTCCACCATGCGTTGGATCGTAACCATCGGCTGGGCCATATAC VDWLITVPLLMIEFYLILRAIANVSSGIFWRLTIGTLIMLVGGYAGEAGYMNVWLGFVIGMVGWFYILYEIFAGEAGKLSAEQAPESVKSAFSTMRWIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGATTGG------------------------CTTATCACTGTTCCGCTTCTCATGATCGAATTCTATCTGATCCTGCGCGCC---------ATC---GCGAATGTCTCTTCG---GGCATT------------------------------------TTCTGGCGT---CTGACGATCGGTACTCTGATCATGCTGGTCGGCGGTTATGCTGGTGAA---------GCA------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AATGTG------------------TGGCTTGGT---TTCGTCATCGGCATGGTCGGTTGGTTCTACATCCTGTACGAAATC---------------TTC------GCT---GGTGAAGCCGGCAAGCTTTCGGCAGAG------CAG---GCACCAGAGTCGGTC---AAG---TCG---GCA---TTC---TCC---ACCATG---CGTTGGATCGTAACCATC---------------------------------------------------------------GGCTGG---------GCCATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPLLMIEFYLILRA---I-ANVSS-GI------------FWR-LTIGTLIMLVGGYAGE---A------G--Y-----------M----------------------NV------WLG-FVIGMVGWFYILYEI-----F--A-GEAGKLSAE--Q-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Alpha6-MEDPR46A6]_DQ062274 [III-Alpha6-MEDPR46A6] MEDPR66C2_env_samples_DQ062274 gi|67483493|gb|DQ062274| Uncultured bacterium clone MEDPR66C2 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR66C2 proteorhodopsin gene, partial cds DQ062274 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/MEDPR46A6-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 MEDPR46A6-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na AGGTACATAGATTGGCTGATCACTGTTCCGCTTCTCATGATCGAGTTCTATCTGATCCTGCGCGCCATTGCCAACGTCTCGTCTGGCATTTTCTGGCGTCTGACGGTCGGTACTCTGATCATGCTTGTCGGCGGTTACGCCGGCGAAGTCGGCTATATGAATGTGTGGCTCGGCTTTGTAATCGGTATGGCCGGTTGGTTCTACATCCTGTACGAGATCTTTGCTGGTGAAGCCGGCAAGCTTTCTGCAGAGCAGGCACCAGAGTCGGTCAAGTCGGCATTCTCCACCATGCGTTGGATTGTAACCATCGGCTGGGCGATATATCCA RYIDWLITVPLLMIEFYLILRAIANVSSGIFWRLTVGTLIMLVGGYAGEVGYMNVWLGFVIGMAGWFYILYEIFAGEAGKLSAEQAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATAGATTGG------------------------CTGATCACTGTTCCGCTTCTCATGATCGAGTTCTATCTGATCCTGCGCGCC---------ATT---GCCAACGTCTCGTCT---GGCATT------------------------------------TTCTGGCGT---CTGACGGTCGGTACTCTGATCATGCTTGTCGGCGGTTACGCCGGCGAA---------GTC------------------GGC------TAT---------------------------------ATG------------------------------------------------------------------AATGTG------------------TGGCTCGGC---TTTGTAATCGGTATGGCCGGTTGGTTCTACATCCTGTACGAGATC---------------TTT------GCT---GGTGAAGCCGGCAAGCTTTCTGCAGAG------CAG---GCACCAGAGTCGGTC---AAG---TCG---GCA---TTC---TCC---ACCATG---CGTTGGATTGTAACCATC---------------------------------------------------------------GGCTGG---------GCGATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMIEFYLILRA---I-ANVSS-GI------------FWR-LTVGTLIMLVGGYAGE---V------G--Y-----------M----------------------NV------WLG-FVIGMAGWFYILYEI-----F--A-GEAGKLSAE--Q-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha6-MEDPR46A6]_DQ062262 [III-Alpha6-MEDPR46A6] clone_MEDPR46A6_complete_DQ062262 gi|67483469|gb|DQ062262| Uncultured bacterium clone MEDPR46A6 proteorhodopsin gene, complete cds Uncultured bacterium clone MEDPR46A6 proteorhodopsin gene, complete cds DQ062262 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/MEDPR46A6-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 MEDPR46A6-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na ATGAAACTCTTCTCGGGTAAAGCCACGAAAACGGCGCTGATTGCGGCGGCGTTGGCTATCACACCCAAAGTTGCGTTTGCTGCAGAAAACCTTGCGAGTGACGACTTCGTCGGCATTTCGTTCTGGTTGATCTCGATGGCGCTGGTCGCTTCGACCGCGTTCTTCTTCATCGAAACGCAGCGCGTGGAAGGTAAGTGGAAGACTTCGCTTACCGTGTCCGGTCTCGTGACCCTGGTCGCAGCCGTGCACTACTTCTACATGCGTGATGTATGGGTCAACACTGGCGCAACACCGACAGTCTATCGTTACATCGACTGGCTGATCACTGTTCCGCTTCTCATGATCGAGTTCTATCTGATCCTGCGCGCCATCGCCAACGTCTCGTCTGGCATTTTCTGGCGTCTGACGGTCGGTACTCTGATCATGCTTGTCGGCGGTTACGCCGGCGAAGTGGGCTACATGAATGTGTGGCTCGGCTTTGTAATCGGTATGGCCGGTTGGTTCTACATCCTGTACGAGATCTTTGCTGGTGAAGCCGGCAAGCTTTCTGCAGAGCAGGCACCAGAGTCGGTCAAGTCGGCATTCTCCACCATGCGTTGGATTGTAACCATCGGCTGGGCGATCTATCCGCTCGGCTACTTCTACGGTTACCTTGCAACCGGTGATCCGGCTAGCTCCGCTGACTCGCTCAACGTGATCTACAACCTGGCTGACGTGCTGAACAAAATTGCGTTCGGTGTGATCATCTGGAACGTTGCGGTCACCGAGACCGAGGCGAAGGCC MKLFSGKATKTALIAAALAITPKVAFAAENLASDDFVGISFWLISMALVASTAFFFIETQRVEGKWKTSLTVSGLVTLVAAVHYFYMRDVWVNTGATPTVYRYIDWLITVPLLMIEFYLILRAIANVSSGIFWRLTVGTLIMLVGGYAGEVGYMNVWLGFVIGMAGWFYILYEIFAGEAGKLSAEQAPESVKSAFSTMRWIVTIGWAIYPLGYFYGYLATGDPASSADSLNVIYNLADVLNKIAFGVIIWNVAVTETEAKA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAACTCTTCTCGGGTAAAGCCACGAAAACGGCGCTGATTGCGGCGGCGTTGGCTATCACACCCAAAGTTGCGTTTGCTGCAGAAAACCTTGCGAGTGACGACTTCGTCGGCATTTCGTTCTGGTTGATCTCGATGGCGCTGGTCGCTTCGACCGCGTTCTTCTTCATCGAAACGCAGCGCGTGGAAGGT---AAGTGGAAGACTTCGCTTACCGTGTCCGGTCTCGTGACCCTGGTCGCAGCCGTGCACTACTTCTACATGCGTGATGTATGGGTC------------------------------AACACT---------------------GGCGCAACACCGACAGTCTATCGTTACATCGACTGG------------------------CTGATCACTGTTCCGCTTCTCATGATCGAGTTCTATCTGATCCTGCGCGCC---------ATC---GCCAACGTCTCGTCT---GGCATT------------------------------------TTCTGGCGT---CTGACGGTCGGTACTCTGATCATGCTTGTCGGCGGTTACGCCGGCGAA---------GTG------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AATGTG------------------TGGCTCGGC---TTTGTAATCGGTATGGCCGGTTGGTTCTACATCCTGTACGAGATC---------------TTT------GCT---GGTGAAGCCGGCAAGCTTTCTGCAGAG------CAG---GCACCAGAGTCGGTC---AAG---TCG---GCA---TTC---TCC---ACCATG---CGTTGGATTGTAACCATC---------------------------------------------------------------GGCTGG---------GCGATCTATCCGCTCGGCTACTTCTACGGTTACCTTGCA------------------------------ACCGGTGATCCGGCTAGCTCCGCTGACTCGCTCAACGTGATCTACAACCTGGCTGACGTGCTGAACAAAATTGCGTTCGGTGTGATCATCTGGAACGTTGCGGTCACCGAG---ACCGAGGCGAAGGCC------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------MKLFSGKATKTALIAAALAITPKVAFAAENLASDDFVGISFWLISMALVASTAFFFIETQRVEG-KWKTSLTVSGLVTLVAAVHYFYMRDVWV----------NT-------GATPTVYRYIDW--------LITVPLLMIEFYLILRA---I-ANVSS-GI------------FWR-LTVGTLIMLVGGYAGE---V------G--Y-----------M----------------------NV------WLG-FVIGMAGWFYILYEI-----F--A-GEAGKLSAE--Q-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYPLGYFYGYLA----------TGDPASSADSLNVIYNLADVLNKIAFGVIIWNVAVTE-TEAKA------------------------------------ [III-Alpha6-MEDPR46A6]_KJ926204 [III-Alpha6-MEDPR46A6] RHOMEO_AG_OTU20 gb|KJ926204| Uncultured bacterium cloneRHOMEO AG OTU20 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU20 putative proteorhodopsin gene, partial cds KJ926204 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/MEDPR46A6-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 MEDPR46A6-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGCTCATCACAGTTCCGCTGCTGATGATTGAATTCTATCTGATTCTACGCGCCATCGCGAACGTGTCATCAGGCATTTTCTGGCGTCTCACCATCGGTTCACTCATCATGCTGGTGGGTGGTTACGCTGGTGAAGTTGGTTATGTGAATGCATGGCTCGGCTTTGTGATTGGTATGGCAGGCTGGTTCTACATCCTGTACGAAATCTTTGCTGGCGAAGCCGGCAAGCTTTCTGCAGAGCAGGCTCCTGAGTCAGTCAAGTCAGCTTTCTCGACCATGCGCTGGATTGTAACCATT WLITVPLLMIEFYLILRAIANVSSGIFWRLTIGSLIMLVGGYAGEVGYVNAWLGFVIGMAGWFYILYEIFAGEAGKLSAEQAPESVKSAFSTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTCATCACAGTTCCGCTGCTGATGATTGAATTCTATCTGATTCTACGCGCC---------ATC---GCGAACGTGTCATCA---GGCATT------------------------------------TTCTGGCGT---CTCACCATCGGTTCACTCATCATGCTGGTGGGTGGTTACGCTGGTGAA---------GTT------------------GGT------TAT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTGATTGGTATGGCAGGCTGGTTCTACATCCTGTACGAAATC---------------TTT------GCT---GGCGAAGCCGGCAAGCTTTCTGCAGAG------CAG---GCTCCTGAGTCAGTC---AAG---TCA---GCT---TTC---TCG---ACCATG---CGCTGGATTGTAACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFYLILRA---I-ANVSS-GI------------FWR-LTIGSLIMLVGGYAGE---V------G--Y-----------V----------------------NA------WLG-FVIGMAGWFYILYEI-----F--A-GEAGKLSAE--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-SAR116]_CP001751 [III-Alpha6-SAR116] Candidatus_Puniceispirillum_marinum_IMCC1322_genome_CP001751 gi|292663142|gb|CP001751| Candidatus Puniceispirillum marinum IMCC1322, complete genome Candidatus Puniceispirillum marinum IMCC1322, complete genome CP001751 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/SAR116 C. Puniceispirillum-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 SAR116 C. Puniceispirillum-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Alphaproteobacteria/SAR116 cluster/Candidatus Puniceispirillum] taxon:488538 genomic_DNA strain 31-janv-14 #na #na Korean Sea marine 36.578272 130.056052 Complete genome sequence of Candidatus Puniceispirillum marinum IMCC1322, a representative of the SAR116 clade in the Alphaproteobacteria Oh,H.M., Kwon,K.K., Kang,I., Kang,S.G., Lee,J.H., Kim,S.J. and Cho,J.C. J. Bacteriol. 192 (12), 32403241 (2010) 20382761 #na ATGAAGATTATGTCGGGTACTTCAAAGGCGATCTTGGCTGCTGCCACTGTTGCCCTTTTCCCTACAATTGCATTCGCTGCTGACGCAAATCTAGCCAGTGATGACTATGTCGGAATTTCGTTCTGGCTAATTTCAATGGCACTTGTTGCCGCAACAGCATTCTTCTTCTTGGAGACACAGCGTGTTTCTGCAAAGTGGAAGACATCACTGACAGTGTCTGGTCTGGTAACTTTGGTTGCTGCCGTTCACTATTTCTACATGCGTGACGTATGGATCAGTACAGGCGATACACCAACGGTATATCGTTACATTGACTGGCTTATCACAGTGCCGCTTCTCATGGTTGAGTTCTACTTGATCCTGCGGGCGATCACAAATGTATCAGGTGGCGTTTTCTGGCGTCTGATGATTGGTACGCTTGTCATGCTTGTTGGCGGTTATGCCGGCGAAGTCGGTTATATGGGCGCATGGCTTGGTTTCATCATTGGTATGGCCGGTTGGGCGTACATTCTGTATGAAATCTTTGTTGGTGAAGCCAGCCGGATTTCGGCAGAGCAGGCTCCTGAGTCTGTTAAGTCAGCCTTTTCAACAATGCGTTGGATTGTGACTATTGGTTGGGCGATTTACCCGATCGGTTACTTCTACGGTTACTTAGGTACAGGCGATCCAGCTTCTGCTGCTGCATCACTTAACGTTATCTATAACTTGGCCGACGTTCTGAACAAGATTGCGTTTGGCGTAATCATCTGGAACGTTGCTGTTACAGAGAGCGAAGCATCCAAG MKIMSGTSKAILAAATVALFPTIAFAADANLASDDYVGISFWLISMALVAATAFFFLETQRVSAKWKTSLTVSGLVTLVAAVHYFYMRDVWISTGDTPTVYRYIDWLITVPLLMVEFYLILRAITNVSGGVFWRLMIGTLVMLVGGYAGEVGYMGAWLGFIIGMAGWAYILYEIFVGEASRISAEQAPESVKSAFSTMRWIVTIGWAIYPIGYFYGYLGTGDPASAAASLNVIYNLADVLNKIAFGVIIWNVAVTESEASK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAGATTATGTCGGGTACTTCAAAGGCGATCTTGGCTGCTGCCACTGTTGCCCTTTTCCCTACAATTGCATTCGCTGCTGACGCAAATCTAGCCAGTGATGACTATGTCGGAATTTCGTTCTGGCTAATTTCAATGGCACTTGTTGCCGCAACAGCATTCTTCTTCTTGGAGACACAGCGTGTTTCTGCA---AAGTGGAAGACATCACTGACAGTGTCTGGTCTGGTAACTTTGGTTGCTGCCGTTCACTATTTCTACATGCGTGACGTATGGATC------------------------------AGTACA---------------------GGCGATACACCAACGGTATATCGTTACATTGACTGG------------------------CTTATCACAGTGCCGCTTCTCATGGTTGAGTTCTACTTGATCCTGCGGGCG---------ATC---ACAAATGTATCAGGT---GGCGTT------------------------------------TTCTGGCGT---CTGATGATTGGTACGCTTGTCATGCTTGTTGGCGGTTATGCCGGCGAA---------GTC------------------GGT------TAT---------------------------------ATG------------------------------------------------------------------GGCGCA------------------TGGCTTGGT---TTCATCATTGGTATGGCCGGTTGGGCGTACATTCTGTATGAAATC---------------TTT------GTT---GGTGAAGCCAGCCGGATTTCGGCAGAG------CAG---GCTCCTGAGTCTGTT---AAG---TCA---GCC---TTT---TCA---ACAATG---CGTTGGATTGTGACTATT---------------------------------------------------------------GGTTGG---------GCGATTTACCCGATCGGTTACTTCTACGGTTACTTAGGT------------------------------ACAGGCGATCCAGCTTCTGCTGCTGCATCACTTAACGTTATCTATAACTTGGCCGACGTTCTGAACAAGATTGCGTTTGGCGTAATCATCTGGAACGTTGCTGTTACAGAG---AGCGAAGCATCCAAG------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------MKIMSGTSKAILAAATVALFPTIAFAADANLASDDYVGISFWLISMALVAATAFFFLETQRVSA-KWKTSLTVSGLVTLVAAVHYFYMRDVWI----------ST-------GDTPTVYRYIDW--------LITVPLLMVEFYLILRA---I-TNVSG-GV------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------M----------------------GA------WLG-FIIGMAGWAYILYEI-----F--V-GEASRISAE--Q-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYPIGYFYGYLG----------TGDPASAAASLNVIYNLADVLNKIAFGVIIWNVAVTE-SEASK------------------------------------ [III-Beta2-a]_FJ545171 [III-Beta2-a] clone_Superior_CD1_PR_H2_rhodopsin_gene_partial_cds_FJ545171 gi|224384017|gb|FJ545171| Uncultured microorganism clone Superior.CD1.PR.H2 putative rhodopsin gene, partial cds. Uncultured microorganism clone Superior.CD1.PR.H2 putative rhodopsin gene, partial cds. FJ545171 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 2/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juin-05 Lake Superior other freshwater 47.3 -91.67 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na ATCACGGTGCCACTTTTGATGGTGGAATTTTACCTGATTTTGTCTGCTGTCACCAAAGTATCTGCTGGAATATTCTGGCGGTTAGTTCTTGGCTCTCTCGTCATGTTAGTCGGTGGCTACCTGGGAGAAGCGGGTTACATGAACACAATGTTCGCATTCGTCATTGGTATGATCGGGTGGGCATACATCCTCTTTGAAATCTTCTTTGGCGAAGCCAGCAAAGTGAATGCAGAGTCTGCTCCTCCAGCGGTGCAATCTGCTTTCAAGCTCATGCGCGGCATCGTGACCATT ITVPLLMVEFYLILSAVTKVSAGIFWRLVLGSLVMLVGGYLGEAGYMNTMFAFVIGMIGWAYILFEIFFGEASKVNAESAPPAVQSAFKLMRGIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACGGTGCCACTTTTGATGGTGGAATTTTACCTGATTTTGTCTGCT---------GTC---ACCAAAGTATCTGCT---GGAATA------------------------------------TTCTGGCGG---TTAGTTCTTGGCTCTCTCGTCATGTTAGTCGGTGGCTACCTGGGAGAA---------GCG------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACACA------------------ATGTTCGCA---TTCGTCATTGGTATGATCGGGTGGGCATACATCCTCTTTGAAATC---------------TTC------TTT---GGCGAAGCCAGCAAAGTGAATGCAGAG------TCT---GCTCCTCCAGCGGTG---CAA---TCT---GCT---TTC---AAG---CTCATG---CGCGGCATCGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLMVEFYLILSA---V-TKVSA-GI------------FWR-LVLGSLVMLVGGYLGE---A------G--Y-----------M----------------------NT------MFA-FVIGMIGWAYILFEI-----F--F-GEASKVNAE--S-APPAV-Q-S-A-F-K-LM-RGIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta2-MOLA814]_FJ618956 [III-Beta2-MOLA814] PR_108_08_12_env_samples_FJ618956 gi|223046795|gb|FJ618956| Uncultured bacterium clone PR 108 08 12 proteorhodopsin gene, partial cds Uncultured bacterium clone PR 108 08 12 proteorhodopsin gene, partial cds FJ618956 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 2/MOLA814-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 2 MOLA814-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-juil-09 #na Arctic_Ocean Arctic Ocean marine 71.37 -156.68 Photoheterotrophic microbes in the Arctic Ocean in summer and winter Cottrell,M.T. and Kirchman,D.L. Appl. Environ. Microbiol. 75 (15), 49584966 (2009) 19502441 #na TACATAGATTGGCTCATTACGGTCCCACTGTTGATGATTGAGTTCTACTTGATCTTGTCAGCTATTACCAAAGTATCAGTCGGCATCTTTTGGCGCCTAATGGTAGGTACCTTGGTGATGTTGGTTGGCGGCTATCTGGGTGAGGCTGGCTACATGGACGTTACCGTGGCCTTCATCATTGGTATGGCTGGCTGGGCATACATTTTGTACGAAATCTTTGCAGGCGAAGCCAGCAAAGTCAGTGCACAAAGCGCACCCCCATCAGTTCAGTCTGCATTCAACACCATGCGTTGGATTGTGACCATCGGATGGGCGATCTAT YIDWLITVPLLMIEFYLILSAITKVSVGIFWRLMVGTLVMLVGGYLGEAGYMDVTVAFIIGMAGWAYILYEIFAGEASKVSAQSAPPSVQSAFNTMRWIVTIGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACATAGATTGG------------------------CTCATTACGGTCCCACTGTTGATGATTGAGTTCTACTTGATCTTGTCAGCT---------ATT---ACCAAAGTATCAGTC---GGCATC------------------------------------TTTTGGCGC---CTAATGGTAGGTACCTTGGTGATGTTGGTTGGCGGCTATCTGGGTGAG---------GCT------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GACGTT------------------ACCGTGGCC---TTCATCATTGGTATGGCTGGCTGGGCATACATTTTGTACGAAATC---------------TTT------GCA---GGCGAAGCCAGCAAAGTCAGTGCACAA------AGC---GCACCCCCATCAGTT---CAG---TCT---GCA---TTC---AAC---ACCATG---CGTTGGATTGTGACCATC---------------------------------------------------------------GGATGG---------GCGATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YIDW--------LITVPLLMIEFYLILSA---I-TKVSV-GI------------FWR-LMVGTLVMLVGGYLGE---A------G--Y-----------M----------------------DV------TVA-FIIGMAGWAYILYEI-----F--A-GEASKVSAQ--S-APPSV-Q-S-A-F-N-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Beta2-MOLA814]_FJ618964 [III-Beta2-MOLA814] PR_108_08_20_env_samples_FJ618964 gi|223046811|gb|FJ618964| Uncultured bacterium clone PR 108 08 20 proteorhodopsin gene, partial cds Uncultured bacterium clone PR 108 08 20 proteorhodopsin gene, partial cds FJ618964 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 2/MOLA814-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 2 MOLA814-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-juil-09 #na Arctic_Ocean Arctic Ocean marine 71.37 -156.68 Photoheterotrophic microbes in the Arctic Ocean in summer and winter Cottrell,M.T. and Kirchman,D.L. Appl. Environ. Microbiol. 75 (15), 49584966 (2009) 19502441 #na TATGTTGATTGGCTCATTACGGTCCCACTGTTGATGATTGAGTTCTACTTGATCTTGTCAGCTATTACCAAAGTATCAGTCGGCATCTTTTGGCGCCTAATGGTAGGTACCTTGGTGATGTTGGTTGGCGGCTACCTGGGTGAGGCTGGCTACATGGACGTTACCGTGGCCTTCATCATTGGTATGGCTGGCTGGGCGTACATTTTGTACGAAATCTTTGCAGGCGAAGCCAGCAAAGTCAGTGCACAAAGCGCACCCCCATCAGTTCAGTCTGCATTCAACACCATGCGTTGGATTGTGACCATCGGGTGGGCAATCTAT YVDWLITVPLLMIEFYLILSAITKVSVGIFWRLMVGTLVMLVGGYLGEAGYMDVTVAFIIGMAGWAYILYEIFAGEASKVSAQSAPPSVQSAFNTMRWIVTIGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTTGATTGG------------------------CTCATTACGGTCCCACTGTTGATGATTGAGTTCTACTTGATCTTGTCAGCT---------ATT---ACCAAAGTATCAGTC---GGCATC------------------------------------TTTTGGCGC---CTAATGGTAGGTACCTTGGTGATGTTGGTTGGCGGCTACCTGGGTGAG---------GCT------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GACGTT------------------ACCGTGGCC---TTCATCATTGGTATGGCTGGCTGGGCGTACATTTTGTACGAAATC---------------TTT------GCA---GGCGAAGCCAGCAAAGTCAGTGCACAA------AGC---GCACCCCCATCAGTT---CAG---TCT---GCA---TTC---AAC---ACCATG---CGTTGGATTGTGACCATC---------------------------------------------------------------GGGTGG---------GCAATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LITVPLLMIEFYLILSA---I-TKVSV-GI------------FWR-LMVGTLVMLVGGYLGE---A------G--Y-----------M----------------------DV------TVA-FIIGMAGWAYILYEI-----F--A-GEASKVSAQ--S-APPSV-Q-S-A-F-N-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Beta2-MOLA814]_FJ618960 [III-Beta2-MOLA814] PR_108_08_16_env_samples_FJ618960 gi|223046803|gb|FJ618960| Uncultured bacterium clone PR 108 08 16 proteorhodopsin gene, partial cds Uncultured bacterium clone PR 108 08 16 proteorhodopsin gene, partial cds FJ618960 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 2/MOLA814-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 2 MOLA814-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-juil-09 #na Arctic_Ocean Arctic Ocean marine 71.37 -156.68 Photoheterotrophic microbes in the Arctic Ocean in summer and winter Cottrell,M.T. and Kirchman,D.L. Appl. Environ. Microbiol. 75 (15), 49584966 (2009) 19502441 #na TACATCGATTGGCTCATCACGGTCCCACTGTTGATGATTGAGTTCTACCTGATCTTGTCAGCCATTACCAAAGTATCAGTTGGCATCTTTTGGCGCCTAATGGTAGGTACCTTGGTGATGTTGGTTGGCGGCTATCTGGGTGAGGCTGGCTATATGGACGTTACCGTGGCCTTCATCATTGGTATGGCTGGCTGGGCATACATTTTGTACGAAATCTTTGCAGGCGAAGCCAGCAAAGTCAGTGCACAAAGCGCACCCCCATCAGTGCAGTCTGCATTCAACACCATGCGTTGGATTGTGACCATCGGGTGGGCCATTTAT YIDWLITVPLLMIEFYLILSAITKVSVGIFWRLMVGTLVMLVGGYLGEAGYMDVTVAFIIGMAGWAYILYEIFAGEASKVSAQSAPPSVQSAFNTMRWIVTIGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACATCGATTGG------------------------CTCATCACGGTCCCACTGTTGATGATTGAGTTCTACCTGATCTTGTCAGCC---------ATT---ACCAAAGTATCAGTT---GGCATC------------------------------------TTTTGGCGC---CTAATGGTAGGTACCTTGGTGATGTTGGTTGGCGGCTATCTGGGTGAG---------GCT------------------GGC------TAT---------------------------------ATG------------------------------------------------------------------GACGTT------------------ACCGTGGCC---TTCATCATTGGTATGGCTGGCTGGGCATACATTTTGTACGAAATC---------------TTT------GCA---GGCGAAGCCAGCAAAGTCAGTGCACAA------AGC---GCACCCCCATCAGTG---CAG---TCT---GCA---TTC---AAC---ACCATG---CGTTGGATTGTGACCATC---------------------------------------------------------------GGGTGG---------GCCATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YIDW--------LITVPLLMIEFYLILSA---I-TKVSV-GI------------FWR-LMVGTLVMLVGGYLGE---A------G--Y-----------M----------------------DV------TVA-FIIGMAGWAYILYEI-----F--A-GEASKVSAQ--S-APPSV-Q-S-A-F-N-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Beta2-MOLA814]_EU795232 [III-Beta2-MOLA814] ARCTIC07_E_2_genomic_EU795232 gi|193084446|gb|EU795232| Uncultured bacterium ARCTIC07 E 02 genomic sequence Uncultured bacterium ARCTIC07 E 02 genomic sequence EU795232 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 2/MOLA814-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 2 MOLA814-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:542389 genomic_DNA other 02-juil-08 #na Arctic Arctic Ocean marine 71.4 -156.8 Direct Submission Henn,M.R., Young,S., Jaffe,D.B., Gnerre,S., Berlin,A., Heiman,D., Hepburn,T., Sykes,S., Kirchman,D.L., Cottrell,M.T., Lander,E., Nusbaum,C. and Birren,B. Submitted (21MAY2008) Broad Institute of MIT and Harvard, 320 Charles Street, Cambridge, MA 02141, USA #na #na ATGACATTTAAATTTATGAAAGCACGAGTGCTTGCGCCAGTCGGTGCCTTCGCTCTTTCGGCTTTAGGCTCAGGCCAGGCTATGGCAAGCACACTCGCAGCGGACGATTTCGTGGGGATCAGCTTTTGGTTGATTTCAATGGCATTAGTTGCATCAACAGTGTTCTTCTTTTTAGAGCGCGACCGTGTTTCCCCTAAGTGGAAGACATCATTAACGGTTTCTGGTCTGGTGACACTTGTCGCCGCTGTTCATTACTTTTACATGCGCGATGTGTGGGTCGAAACTGGTTCAACACCAACCGTGTACCGTTACATTGATTGGCTCATTACGGTCCCGCTGTTGATGATTGAGTTCTACTTGATCTTGTCAGCTATTACCAAAGTATCAGTAGGCATCTTTTGGCGCCTAATGGTAGGTACCTTGGTGATGTTGGTTGGCGGCTATCTGGGTGAGGCTGGCTACATGGACGTTACCGTGGCCTTCATCATTGGTATGGCTGGCTGGGCATACATTTTGTACGAAATCTTTGCAGGCGAAGCCAGCAAAGTCAGTGCACAAAGCGCACCCCCATCAGTTCAGTCTGCATTCAACACCATGCGTTGGATTGTGACCATCGGCTGGGCGATTTACCCCGTCGGTTACTTCTTTGGCTACTTGACTGGCAGCAGCCCAGAAACAAGTGCCAATGCATTGAACATCATTTACAACCTTGCTGACGTGCTCAACAAGATTGCATTTGGTTTGATCATTTGGCAAGTTGCAGTCAGCGAGAGCGAGAAATCGAAAGGC MTFKFMKARVLAPVGAFALSALGSGQAMASTLAADDFVGISFWLISMALVASTVFFFLERDRVSPKWKTSLTVSGLVTLVAAVHYFYMRDVWVETGSTPTVYRYIDWLITVPLLMIEFYLILSAITKVSVGIFWRLMVGTLVMLVGGYLGEAGYMDVTVAFIIGMAGWAYILYEIFAGEASKVSAQSAPPSVQSAFNTMRWIVTIGWAIYPVGYFFGYLTGSSPETSANALNIIYNLADVLNKIAFGLIIWQVAVSESEKSKG ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGACATTTAAATTTATGAAAGCACGAGTGCTTGCGCCAGTCGGTGCCTTCGCTCTTTCGGCTTTAGGCTCAGGCCAGGCTATGGCAAGCACACTCGCAGCGGACGATTTCGTGGGGATCAGCTTTTGGTTGATTTCAATGGCATTAGTTGCATCAACAGTGTTCTTCTTTTTAGAGCGCGACCGTGTTTCCCCT---AAGTGGAAGACATCATTAACGGTTTCTGGTCTGGTGACACTTGTCGCCGCTGTTCATTACTTTTACATGCGCGATGTGTGGGTC------------------------------GAAACT---------------------GGTTCAACACCAACCGTGTACCGTTACATTGATTGG------------------------CTCATTACGGTCCCGCTGTTGATGATTGAGTTCTACTTGATCTTGTCAGCT---------ATT---ACCAAAGTATCAGTA---GGCATC------------------------------------TTTTGGCGC---CTAATGGTAGGTACCTTGGTGATGTTGGTTGGCGGCTATCTGGGTGAG---------GCT------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GACGTT------------------ACCGTGGCC---TTCATCATTGGTATGGCTGGCTGGGCATACATTTTGTACGAAATC---------------TTT------GCA---GGCGAAGCCAGCAAAGTCAGTGCACAA------AGC---GCACCCCCATCAGTT---CAG---TCT---GCA---TTC---AAC---ACCATG---CGTTGGATTGTGACCATC---------------------------------------------------------------GGCTGG---------GCGATTTACCCCGTCGGTTACTTCTTTGGCTACTTGACT------------------------------GGCAGCAGCCCAGAAACAAGTGCCAATGCATTGAACATCATTTACAACCTTGCTGACGTGCTCAACAAGATTGCATTTGGTTTGATCATTTGGCAAGTTGCAGTCAGCGAG---AGCGAGAAATCGAAAGGC--------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------MTFKFMKARVLAPVGAFALSALGSGQAMASTLAADDFVGISFWLISMALVASTVFFFLERDRVSP-KWKTSLTVSGLVTLVAAVHYFYMRDVWV----------ET-------GSTPTVYRYIDW--------LITVPLLMIEFYLILSA---I-TKVSV-GI------------FWR-LMVGTLVMLVGGYLGE---A------G--Y-----------M----------------------DV------TVA-FIIGMAGWAYILYEI-----F--A-GEASKVSAQ--S-APPSV-Q-S-A-F-N-TM-RWIVTI---------------------GW---AIYPVGYFFGYLT----------GSSPETSANALNIIYNLADVLNKIAFGLIIWQVAVSE-SEKSKG----------------------------------- [III-Beta2-MOLA814]_AYMW01000001 [III-Beta2-MOLA814] MOLA814_genome_AYMW01000001 gi|557642237|gb|AYMW01000001| Betaproteobacteria bacterium MOLA814 MOLA814 Contig1, whole genome shotgun sequence Betaproteobacteria bacterium MOLA814 MOLA814 Contig1, whole genome shotgun sequence AYMW01000001 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 2/MOLA814-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 2 MOLA814-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Betaproteobacteria] taxon:1408164 genomic_DNA strain 12-nov-13 Aug2009 seawater Arctic Ocean marine 71.671567 -130.7279 Genome Sequence of Strain MOLA814, a ProteorhodopsinContaining Representative of the Betaproteobacteria Common in the Ocean Courties,A., Riedel,T., Jarek,M., Intertaglia,L., Lebaron,P. and Suzuki,M.T. Genome Announc 1 (6), e0106213 (2013) 24356832 #na ATGACATTTAAATTTATGAAAGCACGAGTGCTTGCGCCAGTCGGTGCCTTCGCTCTTTCGGCTTTAGGCTCAGGCCAGGCTATGGCAAGCACACTCGCAGCAGACGATTTCGTGGGGATCAGCTTTTGGTTGATTTCAATGGCATTAGTTGCATCAACGGTGTTCTTCTTTTTAGAGCGCGACCGTGTTTCCCCTAAGTGGAAGACATCATTAACGGTTTCTGGTCTGGTGACACTTGTCGCCGCTGTTCATTACTTTTACATGCGCGATGTGTGGGTCGAAACTGGTTCAACACCAACCGTGTACCGTTACATTGATTGGCTCATTACGGTCCCACTGTTGATGATTGAGTTCTACTTGATCTTGTCAGCTATTACCAAAGTATCAGTAGGCATCTTTTGGCGCCTAATGGTAGGTACCTTGGTGATGTTGGTTGGCGGCTATCTGGGTGAGGCTGGCTACATGGACGTTACCGTGGCCTTCATCATTGGTATGGCTGGCTGGGCATACATTTTGTACGAAATCTTTGCAGGCGAAGCCAGCAAAGTCAGTGCACAAAGCGCACCCCCATCAGTTCAGTCTGCATTCAACACCATGCGTTGGATTGTGACCATCGGTTGGGCGATTTACCCCGTCGGTTACTTCTTTGGCTACTTGACTGGCAGCAGCCCAGAAACAAGCGCCAATGCATTGAACATCATTTACAACCTTGCTGACGTGCTCAACAAGATTGCATTTGGTTTGATCATTTGGCAAGTTGCAGTCAGCGAGAGCGAGAAATCGAAAGGC MTFKFMKARVLAPVGAFALSALGSGQAMASTLAADDFVGISFWLISMALVASTVFFFLERDRVSPKWKTSLTVSGLVTLVAAVHYFYMRDVWVETGSTPTVYRYIDWLITVPLLMIEFYLILSAITKVSVGIFWRLMVGTLVMLVGGYLGEAGYMDVTVAFIIGMAGWAYILYEIFAGEASKVSAQSAPPSVQSAFNTMRWIVTIGWAIYPVGYFFGYLTGSSPETSANALNIIYNLADVLNKIAFGLIIWQVAVSESEKSKG ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGACATTTAAATTTATGAAAGCACGAGTGCTTGCGCCAGTCGGTGCCTTCGCTCTTTCGGCTTTAGGCTCAGGCCAGGCTATGGCAAGCACACTCGCAGCAGACGATTTCGTGGGGATCAGCTTTTGGTTGATTTCAATGGCATTAGTTGCATCAACGGTGTTCTTCTTTTTAGAGCGCGACCGTGTTTCCCCT---AAGTGGAAGACATCATTAACGGTTTCTGGTCTGGTGACACTTGTCGCCGCTGTTCATTACTTTTACATGCGCGATGTGTGGGTC------------------------------GAAACT---------------------GGTTCAACACCAACCGTGTACCGTTACATTGATTGG------------------------CTCATTACGGTCCCACTGTTGATGATTGAGTTCTACTTGATCTTGTCAGCT---------ATT---ACCAAAGTATCAGTA---GGCATC------------------------------------TTTTGGCGC---CTAATGGTAGGTACCTTGGTGATGTTGGTTGGCGGCTATCTGGGTGAG---------GCT------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GACGTT------------------ACCGTGGCC---TTCATCATTGGTATGGCTGGCTGGGCATACATTTTGTACGAAATC---------------TTT------GCA---GGCGAAGCCAGCAAAGTCAGTGCACAA------AGC---GCACCCCCATCAGTT---CAG---TCT---GCA---TTC---AAC---ACCATG---CGTTGGATTGTGACCATC---------------------------------------------------------------GGTTGG---------GCGATTTACCCCGTCGGTTACTTCTTTGGCTACTTGACT------------------------------GGCAGCAGCCCAGAAACAAGCGCCAATGCATTGAACATCATTTACAACCTTGCTGACGTGCTCAACAAGATTGCATTTGGTTTGATCATTTGGCAAGTTGCAGTCAGCGAG---AGCGAGAAATCGAAAGGC--------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------MTFKFMKARVLAPVGAFALSALGSGQAMASTLAADDFVGISFWLISMALVASTVFFFLERDRVSP-KWKTSLTVSGLVTLVAAVHYFYMRDVWV----------ET-------GSTPTVYRYIDW--------LITVPLLMIEFYLILSA---I-TKVSV-GI------------FWR-LMVGTLVMLVGGYLGE---A------G--Y-----------M----------------------DV------TVA-FIIGMAGWAYILYEI-----F--A-GEASKVSAQ--S-APPSV-Q-S-A-F-N-TM-RWIVTI---------------------GW---AIYPVGYFFGYLT----------GSSPETSANALNIIYNLADVLNKIAFGLIIWQVAVSE-SEKSKG----------------------------------- [III-Beta2-MOLA814]_FJ618963 [III-Beta2-MOLA814] PR_108_08_19_env_samples_FJ618963 gi|223046809|gb|FJ618963| Uncultured bacterium clone PR 108 08 19 proteorhodopsin gene, partial cds Uncultured bacterium clone PR 108 08 19 proteorhodopsin gene, partial cds FJ618963 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 2/MOLA814-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 2 MOLA814-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-juil-09 #na Arctic_Ocean Arctic Ocean marine 71.37 -156.68 Photoheterotrophic microbes in the Arctic Ocean in summer and winter Cottrell,M.T. and Kirchman,D.L. Appl. Environ. Microbiol. 75 (15), 49584966 (2009) 19502441 #na TACGTTGATTGGCTCATTACGGTCCCACTGTTGATGATTGAGTTCTACTTGATCTTGTCAGCTATTACCAAAGTATCAGTCGGCATCTTTTGGCGCCTAATGGTAGGTACCTTGGTGATGTTGGTTGGCGGCTATCTGGGTGAGGCTGGCTACATGGACGTTACCGTGGCCTTCATCATTGGTATGGCTGGCTGGGCATACATTTTGTACGAAATCTTTGCAGGCGAAGCCAGCAAAGTCAGTGCACAAAGCGCACCCCCATCAGTTCAGTCTGCATTCAACACCATGCGTTGGATTGTGACCATCGGTTGGGCAATATAC YVDWLITVPLLMIEFYLILSAITKVSVGIFWRLMVGTLVMLVGGYLGEAGYMDVTVAFIIGMAGWAYILYEIFAGEASKVSAQSAPPSVQSAFNTMRWIVTIGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACGTTGATTGG------------------------CTCATTACGGTCCCACTGTTGATGATTGAGTTCTACTTGATCTTGTCAGCT---------ATT---ACCAAAGTATCAGTC---GGCATC------------------------------------TTTTGGCGC---CTAATGGTAGGTACCTTGGTGATGTTGGTTGGCGGCTATCTGGGTGAG---------GCT------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GACGTT------------------ACCGTGGCC---TTCATCATTGGTATGGCTGGCTGGGCATACATTTTGTACGAAATC---------------TTT------GCA---GGCGAAGCCAGCAAAGTCAGTGCACAA------AGC---GCACCCCCATCAGTT---CAG---TCT---GCA---TTC---AAC---ACCATG---CGTTGGATTGTGACCATC---------------------------------------------------------------GGTTGG---------GCAATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LITVPLLMIEFYLILSA---I-TKVSV-GI------------FWR-LMVGTLVMLVGGYLGE---A------G--Y-----------M----------------------DV------TVA-FIIGMAGWAYILYEI-----F--A-GEASKVSAQ--S-APPSV-Q-S-A-F-N-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Beta2-MOLA814]_FJ618946 [III-Beta2-MOLA814] PR_108_08_02_env_samples_FJ618946 gi|223046775|gb|FJ618946| Uncultured bacterium clone PR 108 08 02 proteorhodopsin gene, partial cds Uncultured bacterium clone PR 108 08 02 proteorhodopsin gene, partial cds FJ618946 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 2/MOLA814-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 2 MOLA814-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-juil-09 #na Arctic_Ocean Arctic Ocean marine 71.37 -156.68 Photoheterotrophic microbes in the Arctic Ocean in summer and winter Cottrell,M.T. and Kirchman,D.L. Appl. Environ. Microbiol. 75 (15), 49584966 (2009) 19502441 #na TACATTGACTGGCTCATTACGGTCCCACTGTTGATGATTGAGTTCTACTTGATCTTGTCAGCTATTACCAAAGTATCAGTCGGCATCTTTTGGCGCCTAATGGTAGGTACCTTGGTGATGTTGGTTGGCGGCTATCTGGGTGAGGCTGGCTACATGGACGTTACCGTGGCCTTCATCATTGGTATGGCTGGCTGGGCATACATTTTGTACGAAATCTTTGCAGGCGAAGCCAGCAAAGTCAGTGCACAAAGCGCACCCCCATCAGTTCAGTCTGCATTCAACACCATGCGTTGGATTGTGACCATCGGTTGGGCTATATAC YIDWLITVPLLMIEFYLILSAITKVSVGIFWRLMVGTLVMLVGGYLGEAGYMDVTVAFIIGMAGWAYILYEIFAGEASKVSAQSAPPSVQSAFNTMRWIVTIGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACATTGACTGG------------------------CTCATTACGGTCCCACTGTTGATGATTGAGTTCTACTTGATCTTGTCAGCT---------ATT---ACCAAAGTATCAGTC---GGCATC------------------------------------TTTTGGCGC---CTAATGGTAGGTACCTTGGTGATGTTGGTTGGCGGCTATCTGGGTGAG---------GCT------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GACGTT------------------ACCGTGGCC---TTCATCATTGGTATGGCTGGCTGGGCATACATTTTGTACGAAATC---------------TTT------GCA---GGCGAAGCCAGCAAAGTCAGTGCACAA------AGC---GCACCCCCATCAGTT---CAG---TCT---GCA---TTC---AAC---ACCATG---CGTTGGATTGTGACCATC---------------------------------------------------------------GGTTGG---------GCTATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YIDW--------LITVPLLMIEFYLILSA---I-TKVSV-GI------------FWR-LMVGTLVMLVGGYLGE---A------G--Y-----------M----------------------DV------TVA-FIIGMAGWAYILYEI-----F--A-GEASKVSAQ--S-APPSV-Q-S-A-F-N-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Beta2-MOLA814]_JX863267 [III-Beta2-MOLA814] MALINA_OTU16_367_L_env_samples_JX863267 gi|425477484|gb|JX863267| Uncultured bacterium clone MALINA OTU16 367 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU16 367 L putative proteorhodopsin mRNA, partial cds JX863267 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 2/MOLA814-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 2 MOLA814-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 02Aug2009 3m_depth Arctic Ocean marine 69.61 -138.23 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTCATTACGGTCCCACTGTTGATGATTGAGTTCTACTTGATCTTGTCAGCTATTACCAAAGTATCAGTCAGCATCTTTTGGCGCCTAATGGTAGGTACCTTGGTGATGTTGGTTGGCGGCTATCTGGGTGAGGCTGACTACATGGACGTTACCGTGGCCTTCATCATTGGTATGGCTGGCTGGGCATACATTTTGTACGAAATCTTTGCAGGCGAGGCCAGCAAAGTCAGTGCACAAAGCGCACCCCCATCAGTTCAGTCTGCATTCAACACCATGCGTTGGATTGTGACCATC WLITVPLLMIEFYLILSAITKVSVSIFWRLMVGTLVMLVGGYLGEADYMDVTVAFIIGMAGWAYILYEIFAGEASKVSAQSAPPSVQSAFNTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTCATTACGGTCCCACTGTTGATGATTGAGTTCTACTTGATCTTGTCAGCT---------ATT---ACCAAAGTATCAGTC---AGCATC------------------------------------TTTTGGCGC---CTAATGGTAGGTACCTTGGTGATGTTGGTTGGCGGCTATCTGGGTGAG---------GCT------------------GAC------TAC---------------------------------ATG------------------------------------------------------------------GACGTT------------------ACCGTGGCC---TTCATCATTGGTATGGCTGGCTGGGCATACATTTTGTACGAAATC---------------TTT------GCA---GGCGAGGCCAGCAAAGTCAGTGCACAA------AGC---GCACCCCCATCAGTT---CAG---TCT---GCA---TTC---AAC---ACCATG---CGTTGGATTGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFYLILSA---I-TKVSV-SI------------FWR-LMVGTLVMLVGGYLGE---A------D--Y-----------M----------------------DV------TVA-FIIGMAGWAYILYEI-----F--A-GEASKVSAQ--S-APPSV-Q-S-A-F-N-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta2-MOLA814]_FJ618965 [III-Beta2-MOLA814] PR_108_08_21_env_samples_FJ618965 gi|223046813|gb|FJ618965| Uncultured bacterium clone PR 108 08 21 proteorhodopsin gene, partial cds Uncultured bacterium clone PR 108 08 21 proteorhodopsin gene, partial cds FJ618965 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 2/MOLA814-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 2 MOLA814-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-juil-09 #na Arctic_Ocean Arctic Ocean marine 71.37 -156.68 Photoheterotrophic microbes in the Arctic Ocean in summer and winter Cottrell,M.T. and Kirchman,D.L. Appl. Environ. Microbiol. 75 (15), 49584966 (2009) 19502441 #na TACATAGATTGGCTCATTACGGTCCCACTGTTGATGATTGAGTTCTACTTGATCTTGTCAGCTATTACCAAAGTATCAGTCAGCATCTTTTGGCGCCTAATGGTAGGTACCTTGGTGATGTTGGTTGGCGGCTATCTGGGTGAGGCTGGCTACATGGACGTTACCGTGGCCTTCATCATTGGTATGGCTGGCTGGGCATACATTTTGTACGAAATCTTTGCAGGCGAAGCCAGCAAAGTCAGTGCACAAAGCGCACCCCCATCAGTTCAGTCTGCATTCAACACCATGCGTTGGATTGTGACCATCGGCTGGGCAATATAC YIDWLITVPLLMIEFYLILSAITKVSVSIFWRLMVGTLVMLVGGYLGEAGYMDVTVAFIIGMAGWAYILYEIFAGEASKVSAQSAPPSVQSAFNTMRWIVTIGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACATAGATTGG------------------------CTCATTACGGTCCCACTGTTGATGATTGAGTTCTACTTGATCTTGTCAGCT---------ATT---ACCAAAGTATCAGTC---AGCATC------------------------------------TTTTGGCGC---CTAATGGTAGGTACCTTGGTGATGTTGGTTGGCGGCTATCTGGGTGAG---------GCT------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GACGTT------------------ACCGTGGCC---TTCATCATTGGTATGGCTGGCTGGGCATACATTTTGTACGAAATC---------------TTT------GCA---GGCGAAGCCAGCAAAGTCAGTGCACAA------AGC---GCACCCCCATCAGTT---CAG---TCT---GCA---TTC---AAC---ACCATG---CGTTGGATTGTGACCATC---------------------------------------------------------------GGCTGG---------GCAATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YIDW--------LITVPLLMIEFYLILSA---I-TKVSV-SI------------FWR-LMVGTLVMLVGGYLGE---A------G--Y-----------M----------------------DV------TVA-FIIGMAGWAYILYEI-----F--A-GEASKVSAQ--S-APPSV-Q-S-A-F-N-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Beta2-MOLA814]_JX863266 [III-Beta2-MOLA814] MALINA_OTU16_366_L_env_samples_JX863266 gi|425477482|gb|JX863266| Uncultured bacterium clone MALINA OTU16 366 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU16 366 L putative proteorhodopsin mRNA, partial cds JX863266 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 2/MOLA814-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 2 MOLA814-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 02Aug2009 3m_depth Arctic Ocean marine 69.61 -138.23 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTCATTACGGTCCCACTGTTGATGATTGAGTTCTACTTGATCTTGTCAGCTATTACCAAAGTATCAGTCGGCATCTTTTGGCGCCTAATGGTAGGTACCTTGGTGATGTTGGTTGGCGGCTATCTGGGTGAGGCTGGCTACATGGACGTTACCGTGGCCTTCATCATTGGTATGGCTGGCTGGGCATACATTTTGTACGAAATCTTTGCAGGCGAAGCCAGCAAAGTCAGTGCACAAAGCGCACCCCCATCAGTTCAGTCTGCATTCAACACCATGCGTTGGACTGTGACCATC WLITVPLLMIEFYLILSAITKVSVGIFWRLMVGTLVMLVGGYLGEAGYMDVTVAFIIGMAGWAYILYEIFAGEASKVSAQSAPPSVQSAFNTMRWTVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTCATTACGGTCCCACTGTTGATGATTGAGTTCTACTTGATCTTGTCAGCT---------ATT---ACCAAAGTATCAGTC---GGCATC------------------------------------TTTTGGCGC---CTAATGGTAGGTACCTTGGTGATGTTGGTTGGCGGCTATCTGGGTGAG---------GCT------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GACGTT------------------ACCGTGGCC---TTCATCATTGGTATGGCTGGCTGGGCATACATTTTGTACGAAATC---------------TTT------GCA---GGCGAAGCCAGCAAAGTCAGTGCACAA------AGC---GCACCCCCATCAGTT---CAG---TCT---GCA---TTC---AAC---ACCATG---CGTTGGACTGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFYLILSA---I-TKVSV-GI------------FWR-LMVGTLVMLVGGYLGE---A------G--Y-----------M----------------------DV------TVA-FIIGMAGWAYILYEI-----F--A-GEASKVSAQ--S-APPSV-Q-S-A-F-N-TM-RWTVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta2-MOLA814]_JX863265 [III-Beta2-MOLA814] MALINA_OTU16_359_L_env_samples_JX863265 gi|425477480|gb|JX863265| Uncultured bacterium clone MALINA OTU16 359 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU16 359 L putative proteorhodopsin mRNA, partial cds JX863265 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 2/MOLA814-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 2 MOLA814-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 02Aug2009 3m_depth Arctic Ocean marine 69.61 -138.23 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTCATTACGGTCCCACTGTTGATGATTGAGTTCTACTTGATCTTGTCAGCTATTACCAAAGTATCAGTCGGCATCTTTTGGCGCCTAATGGTAGGTACCTTGGTGATGTTGGTTGGCGGCTATCTGGGTGAGGCTGGCTACATGGACGTTACCGTGGCCTTCATCATTGGTATGGCTGGCTGGGCATACATTTTGTACGGAATCTTTGCAGGCGAAGCCAGCAAAGTCAGTGCACGAAGCGCACCCCCATCAGTTCAGTCTGCATTCAACACCATGCGTTGGATTGTGACCATC WLITVPLLMIEFYLILSAITKVSVGIFWRLMVGTLVMLVGGYLGEAGYMDVTVAFIIGMAGWAYILYGIFAGEASKVSARSAPPSVQSAFNTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTCATTACGGTCCCACTGTTGATGATTGAGTTCTACTTGATCTTGTCAGCT---------ATT---ACCAAAGTATCAGTC---GGCATC------------------------------------TTTTGGCGC---CTAATGGTAGGTACCTTGGTGATGTTGGTTGGCGGCTATCTGGGTGAG---------GCT------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GACGTT------------------ACCGTGGCC---TTCATCATTGGTATGGCTGGCTGGGCATACATTTTGTACGGAATC---------------TTT------GCA---GGCGAAGCCAGCAAAGTCAGTGCACGA------AGC---GCACCCCCATCAGTT---CAG---TCT---GCA---TTC---AAC---ACCATG---CGTTGGATTGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFYLILSA---I-TKVSV-GI------------FWR-LMVGTLVMLVGGYLGE---A------G--Y-----------M----------------------DV------TVA-FIIGMAGWAYILYGI-----F--A-GEASKVSAR--S-APPSV-Q-S-A-F-N-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta2-MOLA814]_JX863264 [III-Beta2-MOLA814] MALINA_OTU16_346_L_env_samples_JX863264 gi|425477478|gb|JX863264| Uncultured bacterium clone MALINA OTU16 346 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU16 346 L putative proteorhodopsin mRNA, partial cds JX863264 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 2/MOLA814-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 2 MOLA814-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 02Aug2009 3m_depth Arctic Ocean marine 69.61 -138.23 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTCATTACGGTCCCACTGTTGATGATTGAGTTCTACTTGATCTTGTCAGCTATTACCAAAGTATCAGTCGGCATCTTTTGGCGCCTAATGGTAGGTACCTTGGTGATGTTGGTTGGCGGCTATCTGGGTGAGGCTGGCTACATGGACGTTACCGTGGCCTTTATCATTGGTATGGCTGGCTGGGCATACATTTTGTACGAAATCTTTGCAGGCGAAGCCAGCAAAGTCAGTGCACAAAGCGCACCCCCATCAGTTCAGTCTGCATTCAACACCATGCGTTGGATTGTGACCATC WLITVPLLMIEFYLILSAITKVSVGIFWRLMVGTLVMLVGGYLGEAGYMDVTVAFIIGMAGWAYILYEIFAGEASKVSAQSAPPSVQSAFNTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTCATTACGGTCCCACTGTTGATGATTGAGTTCTACTTGATCTTGTCAGCT---------ATT---ACCAAAGTATCAGTC---GGCATC------------------------------------TTTTGGCGC---CTAATGGTAGGTACCTTGGTGATGTTGGTTGGCGGCTATCTGGGTGAG---------GCT------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GACGTT------------------ACCGTGGCC---TTTATCATTGGTATGGCTGGCTGGGCATACATTTTGTACGAAATC---------------TTT------GCA---GGCGAAGCCAGCAAAGTCAGTGCACAA------AGC---GCACCCCCATCAGTT---CAG---TCT---GCA---TTC---AAC---ACCATG---CGTTGGATTGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFYLILSA---I-TKVSV-GI------------FWR-LMVGTLVMLVGGYLGE---A------G--Y-----------M----------------------DV------TVA-FIIGMAGWAYILYEI-----F--A-GEASKVSAQ--S-APPSV-Q-S-A-F-N-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta2-MOLA814]_JX863179 [III-Beta2-MOLA814] MALINA_OTU16_474_L_env_samples_JX863179 gi|425477308|gb|JX863179| Uncultured bacterium clone MALINA OTU16 474 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU16 474 L putative proteorhodopsin gene, partial cds JX863179 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 2/MOLA814-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 2 MOLA814-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 13Aug2009 0m_depth Arctic Ocean marine 69.25 -137.2 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTCATTACGGTCCCACTGTTGATGATTGAGTTCTACTTGATCTTGTCAGCTATTACCAAAGTATCAGTCGGCATCTTTTGGCGCCTAATGGTAGGTACCTTGGTGATGTTGGTTGGCGGCTATCTGGGTGAGGCTGGCTACATGGACGTTACCGTAGCCTTCATCATTGGTGTGGCTGGCTGGGCATACATTTTGTACGAAATCTTTGCAGGCGAAGCCAGCAAAGTCAGTGCACAAAGCGCACCCCCATCAGTTCAGTCTGCATTCAACACCATGCGTTGGATTGTGACCATC WLITVPLLMIEFYLILSAITKVSVGIFWRLMVGTLVMLVGGYLGEAGYMDVTVAFIIGVAGWAYILYEIFAGEASKVSAQSAPPSVQSAFNTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTCATTACGGTCCCACTGTTGATGATTGAGTTCTACTTGATCTTGTCAGCT---------ATT---ACCAAAGTATCAGTC---GGCATC------------------------------------TTTTGGCGC---CTAATGGTAGGTACCTTGGTGATGTTGGTTGGCGGCTATCTGGGTGAG---------GCT------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GACGTT------------------ACCGTAGCC---TTCATCATTGGTGTGGCTGGCTGGGCATACATTTTGTACGAAATC---------------TTT------GCA---GGCGAAGCCAGCAAAGTCAGTGCACAA------AGC---GCACCCCCATCAGTT---CAG---TCT---GCA---TTC---AAC---ACCATG---CGTTGGATTGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFYLILSA---I-TKVSV-GI------------FWR-LMVGTLVMLVGGYLGE---A------G--Y-----------M----------------------DV------TVA-FIIGVAGWAYILYEI-----F--A-GEASKVSAQ--S-APPSV-Q-S-A-F-N-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha5-IMCC14465]_DQ203399 [III-Alpha5-IMCC14465] MedHO102F11_env_samples_DQ203399 gi|77547246|gb|DQ203399| Uncultured bacterium clone MedHO102F11 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102F11 predicted proteorhodopsin gene, partial cds DQ203399 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 5/IMCC14465-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 5 IMCC14465-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTATATTGACTGGCTGATTACTGTGCCGCTCTTGATGGTGGAATTCTTCCTCATCTTGTCGGCCATCACCGCTGTTCCGGCGCGCGTCTTCTGGCGTCTGCTTATCGGTACAACGCTGATGCTGGTATTCGGTTATCTGGGCGAAGCCGGTTACATGGATGTGACCGCAGGCTTTGTGCTGGGCACCGCGGCTTGGTTGTATGTTCTTTATGAAATCTTCCGTGGTGAAGCCGGTCAGTTGAATGCCGAGAATGCCAGCCCTGCTGTGCAATCCGCTTTCAGCCTGATGCGCTACATTGTGACTTTCGGGTGGGCCATCTACCCA RYIDWLITVPLLMVEFFLILSAITAVPARVFWRLLIGTTLMLVFGYLGEAGYMDVTAGFVLGTAAWLYVLYEIFRGEAGQLNAENASPAVQSAFSLMRYIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTATATTGACTGG------------------------CTGATTACTGTGCCGCTCTTGATGGTGGAATTCTTCCTCATCTTGTCGGCC---------ATC---ACCGCTGTTCCGGCG---CGCGTC------------------------------------TTCTGGCGT---CTGCTTATCGGTACAACGCTGATGCTGGTATTCGGTTATCTGGGCGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GATGTG------------------ACCGCAGGC---TTTGTGCTGGGCACCGCGGCTTGGTTGTATGTTCTTTATGAAATC---------------TTC------CGT---GGTGAAGCCGGTCAGTTGAATGCCGAG------AAT---GCCAGCCCTGCTGTG---CAA---TCC---GCT---TTC---AGC---CTGATG---CGCTACATTGTGACTTTC---------------------------------------------------------------GGGTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFFLILSA---I-TAVPA-RV------------FWR-LLIGTTLMLVFGYLGE---A------G--Y-----------M----------------------DV------TAG-FVLGTAAWLYVLYEI-----F--R-GEAGQLNAE--N-ASPAV-Q-S-A-F-S-LM-RYIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha5-IMCC14465]_DQ203401 [III-Alpha5-IMCC14465] MedHO102F2_env_samples_DQ203401 gi|77547250|gb|DQ203401| Uncultured bacterium clone MedHO102F2 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102F2 predicted proteorhodopsin gene, partial cds DQ203401 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 5/IMCC14465-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 5 IMCC14465-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTGATTACTGTGCCGCTCTTGATGGTGGAATTCTTCCTCATCTTGTCGGCCATCACCGCTGTTCCGGCGCGCGTCTTCTGGCGTCTGCTTATCGGTACAACGCTGATGCTGGTATTCGGTTATCTGGGCGAAGCCGGTTACATGGATGTGACCGCAGGCTTTGTGCTGGGCACCGCGGCTTGGTTGTATGTTCTTTATGAAATCTTCCGTGGTGAAGCCGGTCAGTTGAATGCCGAGAATGCCAGCCCTGCTGTGCAATCCGCTTTCAGCCTGATGCGCTACATTGTGACTTTCGGTTGGGCCATCTACCCA RYIDWLITVPLLMVEFFLILSAITAVPARVFWRLLIGTTLMLVFGYLGEAGYMDVTAGFVLGTAAWLYVLYEIFRGEAGQLNAENASPAVQSAFSLMRYIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTGATTACTGTGCCGCTCTTGATGGTGGAATTCTTCCTCATCTTGTCGGCC---------ATC---ACCGCTGTTCCGGCG---CGCGTC------------------------------------TTCTGGCGT---CTGCTTATCGGTACAACGCTGATGCTGGTATTCGGTTATCTGGGCGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GATGTG------------------ACCGCAGGC---TTTGTGCTGGGCACCGCGGCTTGGTTGTATGTTCTTTATGAAATC---------------TTC------CGT---GGTGAAGCCGGTCAGTTGAATGCCGAG------AAT---GCCAGCCCTGCTGTG---CAA---TCC---GCT---TTC---AGC---CTGATG---CGCTACATTGTGACTTTC---------------------------------------------------------------GGTTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFFLILSA---I-TAVPA-RV------------FWR-LLIGTTLMLVFGYLGE---A------G--Y-----------M----------------------DV------TAG-FVLGTAAWLYVLYEI-----F--R-GEAGQLNAE--N-ASPAV-Q-S-A-F-S-LM-RYIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha5-IMCC14465]_DQ203364 [III-Alpha5-IMCC14465] MedHO102C10_env_samples_DQ203364 gi|77547176|gb|DQ203364| Uncultured bacterium clone MedHO102C10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102C10 predicted proteorhodopsin gene, partial cds DQ203364 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 5/IMCC14465-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 5 IMCC14465-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGACTGGCTGATTACTGTGCCGCTCTTGATGGTGGAATTCTTCCTCATCTTGTCGGCCATCACCGCTGTTCCGGCGCGCGTCTTCTGGCGTCTGCTTATCGGTACAACGCTGATGCTGGTATTCGGTTATCTGGGCGAAGCCGGTTACATGGATGTGACCGCAGGCTTTGTGCTGGGCACCGCGGCTTGGTTGTATGTTCTTTATGAAATCTTCCGTGGTGAAGCCGGTCAGCTGAATGCCGAGAGTGCCAGCCCTGCTGTGCAATCCGCTTTCAGCCTGATGCGCTACATTGTGACTTTCGGTTGGGCCATTTACCCA SYIDWLITVPLLMVEFFLILSAITAVPARVFWRLLIGTTLMLVFGYLGEAGYMDVTAGFVLGTAAWLYVLYEIFRGEAGQLNAESASPAVQSAFSLMRYIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGACTGG------------------------CTGATTACTGTGCCGCTCTTGATGGTGGAATTCTTCCTCATCTTGTCGGCC---------ATC---ACCGCTGTTCCGGCG---CGCGTC------------------------------------TTCTGGCGT---CTGCTTATCGGTACAACGCTGATGCTGGTATTCGGTTATCTGGGCGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GATGTG------------------ACCGCAGGC---TTTGTGCTGGGCACCGCGGCTTGGTTGTATGTTCTTTATGAAATC---------------TTC------CGT---GGTGAAGCCGGTCAGCTGAATGCCGAG------AGT---GCCAGCCCTGCTGTG---CAA---TCC---GCT---TTC---AGC---CTGATG---CGCTACATTGTGACTTTC---------------------------------------------------------------GGTTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMVEFFLILSA---I-TAVPA-RV------------FWR-LLIGTTLMLVFGYLGE---A------G--Y-----------M----------------------DV------TAG-FVLGTAAWLYVLYEI-----F--R-GEAGQLNAE--S-ASPAV-Q-S-A-F-S-LM-RYIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha5-IMCC14465]_KJ926134 [III-Alpha5-IMCC14465] BOUM_OTU047_env_samples gb|KJ926134| Uncultured bacterium clone BOUM OTU047 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU047 putative proteorhodopsin gene, partial cds KJ926134 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 5/IMCC14465-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 5 IMCC14465-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 31.0165 -10.0357 #na #na #na #na #na GTTGATTGGCTGATTACTGTGTCGCTCTTGACGGTGGAATTCTTCCTCATCTTGTCGGCCATCACCGCTGTTCCGGCGCGCGTCTTCTGGCGTAATGGAATCGGTACAAATCAGATGCTGGTATTCGGTTATCTGGGGGAAGCCGGTTACATGGATGTGACCGCACGCTATATGCTGGGCACCGCGGCTCGGTTGTATGTTCTTTATGAAATCTTCCGTGGTGAAGCCGGTCAGTTGAATGCCGAGAATGCCAGCCCTGCTGTCCAATCCGCTTTCCACGTGATCCGCTACATTGTGAATTTCGGCAGGGCCATATAC VDWLITVSLLTVEFFLILSAITAVPARVFWRNGIGTNQMLVFGYLGEAGYMDVTARYMLGTAARLYVLYEIFRGEAGQLNAENASPAVQSAFHVIRYIVNFGRAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGATTGG------------------------CTGATTACTGTGTCGCTCTTGACGGTGGAATTCTTCCTCATCTTGTCGGCC---------ATC---ACCGCTGTTCCGGCG---CGCGTC------------------------------------TTCTGGCGT---AATGGAATCGGTACAAATCAGATGCTGGTATTCGGTTATCTGGGGGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GATGTG------------------ACCGCACGC---TATATGCTGGGCACCGCGGCTCGGTTGTATGTTCTTTATGAAATC---------------TTC------CGT---GGTGAAGCCGGTCAGTTGAATGCCGAG------AAT---GCCAGCCCTGCTGTC---CAA---TCC---GCT---TTC---CAC---GTGATC---CGCTACATTGTGAATTTC---------------------------------------------------------------GGCAGG---------GCCATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVSLLTVEFFLILSA---I-TAVPA-RV------------FWR-NGIGTNQMLVFGYLGE---A------G--Y-----------M----------------------DV------TAR-YMLGTAARLYVLYEI-----F--R-GEAGQLNAE--N-ASPAV-Q-S-A-F-H-VI-RYIVNF---------------------GR---AIY--------------------------------------------------------------------------------------------------- [III-Alpha5-IMCC14465]_KJ926135 [III-Alpha5-IMCC14465] BOUM_OTU048_env_samples gb|KJ926135| Uncultured bacterium clone BOUM OTU048 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU048 putative proteorhodopsin gene, partial cds KJ926135 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 5/IMCC14465-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 5 IMCC14465-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 31.0165 -10.0357 #na #na #na #na #na ATTGACTGGCTGATTACTGTGCCGCTCTTGATGGTGGAATTCTTCCTCATCTTGTCGGCCATCACCGCTGTTCCGGCGCGCGTCTTCTGGCGTCTGCTTATCGGTACAACGCTGATGCTGGTATTCGGCTATCTTGGCGAAGCCGGTTACATGGATGTGACCGCAGGCTTTGTGCTGGGCACCGCGGCTTGGTTGTATGTTCTTTATGAAATCTTCCGTGGTGAAGCCGGTCAGTTGAATGCCGAGAATGCCAGCCCTGCTGTGCAATCCGCTTTCAGCTTGATGCGCTACATTGTGACTTTCGGGTGGGCAATTTAT IDWLITVPLLMVEFFLILSAITAVPARVFWRLLIGTTLMLVFGYLGEAGYMDVTAGFVLGTAAWLYVLYEIFRGEAGQLNAENASPAVQSAFSLMRYIVTFGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGACTGG------------------------CTGATTACTGTGCCGCTCTTGATGGTGGAATTCTTCCTCATCTTGTCGGCC---------ATC---ACCGCTGTTCCGGCG---CGCGTC------------------------------------TTCTGGCGT---CTGCTTATCGGTACAACGCTGATGCTGGTATTCGGCTATCTTGGCGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GATGTG------------------ACCGCAGGC---TTTGTGCTGGGCACCGCGGCTTGGTTGTATGTTCTTTATGAAATC---------------TTC------CGT---GGTGAAGCCGGTCAGTTGAATGCCGAG------AAT---GCCAGCCCTGCTGTG---CAA---TCC---GCT---TTC---AGC---TTGATG---CGCTACATTGTGACTTTC---------------------------------------------------------------GGGTGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDW--------LITVPLLMVEFFLILSA---I-TAVPA-RV------------FWR-LLIGTTLMLVFGYLGE---A------G--Y-----------M----------------------DV------TAG-FVLGTAAWLYVLYEI-----F--R-GEAGQLNAE--N-ASPAV-Q-S-A-F-S-LM-RYIVTF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Alpha5-IMCC14465]_DQ903155 [III-Alpha5-IMCC14465] clone_HB10013_DQ903155 gi|116294039|gb|DQ903155| Uncultured bacterium clone HB10013 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone HB10013 putative proteorhodopsin gene, partial cds. DQ903155 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 5/IMCC14465-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 5 IMCC14465-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na East China Sea surface water (ECS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na ATGGTAGCCGCTACTGTATTCTTCTTCATCGAACGTGACCGCGTCGATTCAAAATGGAAAACCTCTTTGACGGTTTCCGGCTTGGTGACATTGGTTGCCGCCGTGCATTATTTCTATATGCGCGATGTGTGGGTCGCCACCGGCGAAACACCGACCGTCTATCGTTATATTGACTGGCTGATTACTGTGCCGCTCTTGATGGTGGAATTCTTCCTCATCTTGTCGGCCATCACCGCTGTTCCGGCGCGCGTCTTCTGGCGTCTGCTTATCGGTACAACGCTGATGCTGGTATTCGGTTATCTGGGCGAAGCCGGTTACATGGATGTGACCGCAGGCTTTGTGCTGGGCACCGCAGCTTGGTTGTATGTTCTTTATGAAATCTTCCGTGGTGAAGCCGGTCAGTTGAATGCCGAGAATGCCAGCCCTGCTGTGCAATCCGCTTTCAGCCTGATGCGCTACATTGTGACTTTCGGGTGGGCGATTTACCCA MVAATVFFFIERDRVDSKWKTSLTVSGLVTLVAAVHYFYMRDVWVATGETPTVYRYIDWLITVPLLMVEFFLILSAITAVPARVFWRLLIGTTLMLVFGYLGEAGYMDVTAGFVLGTAAWLYVLYEIFRGEAGQLNAENASPAVQSAFSLMRYIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTATTCTTCTTCATCGAACGTGACCGCGTCGATTCA---AAATGGAAAACCTCTTTGACGGTTTCCGGCTTGGTGACATTGGTTGCCGCCGTGCATTATTTCTATATGCGCGATGTGTGGGTC---------------------------------------------------GCCACCGGCGAAACACCGACCGTCTATCGTTATATTGACTGG------------------------CTGATTACTGTGCCGCTCTTGATGGTGGAATTCTTCCTCATCTTGTCGGCC---------ATC---ACCGCTGTTCCGGCG---CGCGTC------------------------------------TTCTGGCGT---CTGCTTATCGGTACAACGCTGATGCTGGTATTCGGTTATCTGGGCGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GATGTG------------------ACCGCAGGC---TTTGTGCTGGGCACCGCAGCTTGGTTGTATGTTCTTTATGAAATC---------------TTC------CGT---GGTGAAGCCGGTCAGTTGAATGCCGAG------AAT---GCCAGCCCTGCTGTG---CAA---TCC---GCT---TTC---AGC---CTGATG---CGCTACATTGTGACTTTC---------------------------------------------------------------GGGTGG---------GCGATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFIERDRVDS-KWKTSLTVSGLVTLVAAVHYFYMRDVWV-----------------ATGETPTVYRYIDW--------LITVPLLMVEFFLILSA---I-TAVPA-RV------------FWR-LLIGTTLMLVFGYLGE---A------G--Y-----------M----------------------DV------TAG-FVLGTAAWLYVLYEI-----F--R-GEAGQLNAE--N-ASPAV-Q-S-A-F-S-LM-RYIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha5-IMCC14465]_DQ903169 [III-Alpha5-IMCC14465] clone_HB10086_DQ903169 gi|116294067|gb|DQ903169| Uncultured bacterium clone HB10086 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone HB10086 putative proteorhodopsin gene, partial cds. DQ903169 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 5/IMCC14465-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 5 IMCC14465-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na East China Sea surface water (ECS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na ATGGTGGCCGCTACTGCATTCTTCTTCATCGAACGTGACCGCGTCGATTCAAAATGGAAAACCTCTTTGGCGGTTTCCGGCTTGGTGACATTGGTTGCCGCCGTGCATTATTTCTATATGCGCGATGTGTGGGTCGCCACCGGCGAAACACCGACCGTCTATCGTTATATTGACTGGCTGATTACTGTGCCGCTCTTGATGGTGGAATTCTTCCTCATCTTGTCGGCCATCACCGCTGTTCCGGCGCGCGTCTTCTGGCGTCTGCTTATCGGTACAACGCTGATGCTGGTATTCGGTTATCTGGGCGAAGCCGGTTACATGGATGTGACCGCAGGCTTTGTGCTGGGCACCGCAGCTTGGTTGTATGTTCTTTATGAAATCTTCCGTGGTGAAGCCGGTCAGTTGAATGCCGAGAATGCCAGCCCTGCTGTGCAATCCGCTTTCAGCCTGATGCGCTACATTGTGACTTTCGGGTGGGCTATTTACCCA MVAATAFFFIERDRVDSKWKTSLAVSGLVTLVAAVHYFYMRDVWVATGETPTVYRYIDWLITVPLLMVEFFLILSAITAVPARVFWRLLIGTTLMLVFGYLGEAGYMDVTAGFVLGTAAWLYVLYEIFRGEAGQLNAENASPAVQSAFSLMRYIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCATTCTTCTTCATCGAACGTGACCGCGTCGATTCA---AAATGGAAAACCTCTTTGGCGGTTTCCGGCTTGGTGACATTGGTTGCCGCCGTGCATTATTTCTATATGCGCGATGTGTGGGTC---------------------------------------------------GCCACCGGCGAAACACCGACCGTCTATCGTTATATTGACTGG------------------------CTGATTACTGTGCCGCTCTTGATGGTGGAATTCTTCCTCATCTTGTCGGCC---------ATC---ACCGCTGTTCCGGCG---CGCGTC------------------------------------TTCTGGCGT---CTGCTTATCGGTACAACGCTGATGCTGGTATTCGGTTATCTGGGCGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GATGTG------------------ACCGCAGGC---TTTGTGCTGGGCACCGCAGCTTGGTTGTATGTTCTTTATGAAATC---------------TTC------CGT---GGTGAAGCCGGTCAGTTGAATGCCGAG------AAT---GCCAGCCCTGCTGTG---CAA---TCC---GCT---TTC---AGC---CTGATG---CGCTACATTGTGACTTTC---------------------------------------------------------------GGGTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFIERDRVDS-KWKTSLAVSGLVTLVAAVHYFYMRDVWV-----------------ATGETPTVYRYIDW--------LITVPLLMVEFFLILSA---I-TAVPA-RV------------FWR-LLIGTTLMLVFGYLGE---A------G--Y-----------M----------------------DV------TAG-FVLGTAAWLYVLYEI-----F--R-GEAGQLNAE--N-ASPAV-Q-S-A-F-S-LM-RYIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha5-IMCC14465]_DQ903158 [III-Alpha5-IMCC14465] clone_HB10027_DQ903158 gi|116294045|gb|DQ903158| Uncultured bacterium clone HB10027 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone HB10027 putative proteorhodopsin gene, partial cds. DQ903158 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 5/IMCC14465-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 5 IMCC14465-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na East China Sea surface water (ECS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na ATGCTTGCCGCTACTGTGTTCTTCTTCATCGAACGTGACCGCGTCGATTCAAAATGGAAAACCTCTTTGACGGTTTCCGGCTTGGTGACATTGGTTGCCGCCGTGCATTATTTCTATATGCGCGATGTGTGGGTCGCCACCGGCGAAACACCGACCGTCTATCGTTATATTGACTGGCTGATTACTGTGCCGCTCTTGATGGTGGAATTCTTCCTCATCTTGTCGGCCATCACCGCTGTTCCGGCGCGCGTCTTCTGGCGTCTGCTTATCGGTACAACGCTGATGCTGGTATTCGGTTATCTGGGCGAAGCCGGCTACATGGATGTGACCGCAGGCTTTGTGCTGGGCACCGCAGCTTGGTTGTATGTTCTTTATGAAATCTTCCGTGGTGAAGCCGGTCAGTTGAATGCCGAGAATGCCAGCCCTGCTGTGCAATCCGCTTTCAGCCTGATGCGCTACATTGTGACTTTCGGGTGGGCGATCTATCCA MLAATVFFFIERDRVDSKWKTSLTVSGLVTLVAAVHYFYMRDVWVATGETPTVYRYIDWLITVPLLMVEFFLILSAITAVPARVFWRLLIGTTLMLVFGYLGEAGYMDVTAGFVLGTAAWLYVLYEIFRGEAGQLNAENASPAVQSAFSLMRYIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACTGTGTTCTTCTTCATCGAACGTGACCGCGTCGATTCA---AAATGGAAAACCTCTTTGACGGTTTCCGGCTTGGTGACATTGGTTGCCGCCGTGCATTATTTCTATATGCGCGATGTGTGGGTC---------------------------------------------------GCCACCGGCGAAACACCGACCGTCTATCGTTATATTGACTGG------------------------CTGATTACTGTGCCGCTCTTGATGGTGGAATTCTTCCTCATCTTGTCGGCC---------ATC---ACCGCTGTTCCGGCG---CGCGTC------------------------------------TTCTGGCGT---CTGCTTATCGGTACAACGCTGATGCTGGTATTCGGTTATCTGGGCGAA---------GCC------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GATGTG------------------ACCGCAGGC---TTTGTGCTGGGCACCGCAGCTTGGTTGTATGTTCTTTATGAAATC---------------TTC------CGT---GGTGAAGCCGGTCAGTTGAATGCCGAG------AAT---GCCAGCCCTGCTGTG---CAA---TCC---GCT---TTC---AGC---CTGATG---CGCTACATTGTGACTTTC---------------------------------------------------------------GGGTGG---------GCGATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFIERDRVDS-KWKTSLTVSGLVTLVAAVHYFYMRDVWV-----------------ATGETPTVYRYIDW--------LITVPLLMVEFFLILSA---I-TAVPA-RV------------FWR-LLIGTTLMLVFGYLGE---A------G--Y-----------M----------------------DV------TAG-FVLGTAAWLYVLYEI-----F--R-GEAGQLNAE--N-ASPAV-Q-S-A-F-S-LM-RYIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha5-IMCC14465]_DQ903168 [III-Alpha5-IMCC14465] clone_HB10085_DQ903168 gi|116294065|gb|DQ903168| Uncultured bacterium clone HB10085 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone HB10085 putative proteorhodopsin gene, partial cds. DQ903168 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 5/IMCC14465-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 5 IMCC14465-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na East China Sea surface water (ECS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na ATGGTGGCCGCTACTGTGTTCTTCTTCATCGAACGTGACCGCGTCGATTCAAAATGGAAAACCTCTTTGACGGTTTCCGGCTTGGTGACATTGGTTGCCGCCGTGCATTATTTCTATATGCGCGATGTGTGGGTCGCCACCGGCGAAACACCGACCGTCTATCGTTATATTGACTGGCTGATTACTGTGCCGCTCTTGATGGTGGAATTCTTCCTCATCTTGTCGGCCATCACCGCTGTTCCGGCGCGCGTCTTCTGGCGTCTGCTTATCGGTACAACGCTGATGCTGGTATTCGGTTATCTGGGCGAAGCCGGTTACATGGATGTGACCGCAGGCTTTGTGCTGGGCACCGCAGCTTGGTTGTATGTTCTTTATGAAATCTTCCGTGGTGAAGCCGGTCAGTTGAATGCCGAGAATGCCAGCCCTGCTGTGCAATCCGCTTTCAGCCTGATGCGCTACATTGTGACTTTCGGGTGGGCGATCTACCCA MVAATVFFFIERDRVDSKWKTSLTVSGLVTLVAAVHYFYMRDVWVATGETPTVYRYIDWLITVPLLMVEFFLILSAITAVPARVFWRLLIGTTLMLVFGYLGEAGYMDVTAGFVLGTAAWLYVLYEIFRGEAGQLNAENASPAVQSAFSLMRYIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTGTTCTTCTTCATCGAACGTGACCGCGTCGATTCA---AAATGGAAAACCTCTTTGACGGTTTCCGGCTTGGTGACATTGGTTGCCGCCGTGCATTATTTCTATATGCGCGATGTGTGGGTC---------------------------------------------------GCCACCGGCGAAACACCGACCGTCTATCGTTATATTGACTGG------------------------CTGATTACTGTGCCGCTCTTGATGGTGGAATTCTTCCTCATCTTGTCGGCC---------ATC---ACCGCTGTTCCGGCG---CGCGTC------------------------------------TTCTGGCGT---CTGCTTATCGGTACAACGCTGATGCTGGTATTCGGTTATCTGGGCGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GATGTG------------------ACCGCAGGC---TTTGTGCTGGGCACCGCAGCTTGGTTGTATGTTCTTTATGAAATC---------------TTC------CGT---GGTGAAGCCGGTCAGTTGAATGCCGAG------AAT---GCCAGCCCTGCTGTG---CAA---TCC---GCT---TTC---AGC---CTGATG---CGCTACATTGTGACTTTC---------------------------------------------------------------GGGTGG---------GCGATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFIERDRVDS-KWKTSLTVSGLVTLVAAVHYFYMRDVWV-----------------ATGETPTVYRYIDW--------LITVPLLMVEFFLILSA---I-TAVPA-RV------------FWR-LLIGTTLMLVFGYLGE---A------G--Y-----------M----------------------DV------TAG-FVLGTAAWLYVLYEI-----F--R-GEAGQLNAE--N-ASPAV-Q-S-A-F-S-LM-RYIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha5-IMCC14465]_DQ903163 [III-Alpha5-IMCC14465] clone_HB10040_DQ903163 gi|116294055|gb|DQ903163| Uncultured bacterium clone HB10040 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone HB10040 putative proteorhodopsin gene, partial cds. DQ903163 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 5/IMCC14465-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 5 IMCC14465-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na East China Sea surface water (ECS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na ATGGTGGCCGCTACTGTATTCTTCTTCATCGAACGTGACCGCGTCGATTCAAAATGGAAAACCTCTTTGACGGTTTCCGGCTTGGTGACATTGGTTGCCGCCGTGCATTATTTCTATATGCGCGATGTGTGGGTCGCCACCGGCGAAACACCGACCGTCTATCGTTATATTGACTGGCTGATTACTGTGCCGCTCTTGATGGTGGAATTCTTCCTCATCTTGTCGGCCATCACCGCTGTTCCGGCGCGCGTCTTCTGGCGCCTGCTTATCGGTACAACGCTGATGCTGGTATTCGGTTATCTGGGCGAAGCCGGTTACATGGATGTGACCGCAGGCTTTGTGCTGGGCACCGCAGCTTGGTTGTATGTTCTTTATGAAATCTTCCGTGGTGAAGCCGGTCAGTTGAATGCCGAGAATGCCAGCCCTGCTGTGCAATCCGCTTTCAGCCTGATGCGCTACATTGTGACTTTCGGTTGGGCTATCTACCCA MVAATVFFFIERDRVDSKWKTSLTVSGLVTLVAAVHYFYMRDVWVATGETPTVYRYIDWLITVPLLMVEFFLILSAITAVPARVFWRLLIGTTLMLVFGYLGEAGYMDVTAGFVLGTAAWLYVLYEIFRGEAGQLNAENASPAVQSAFSLMRYIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTATTCTTCTTCATCGAACGTGACCGCGTCGATTCA---AAATGGAAAACCTCTTTGACGGTTTCCGGCTTGGTGACATTGGTTGCCGCCGTGCATTATTTCTATATGCGCGATGTGTGGGTC---------------------------------------------------GCCACCGGCGAAACACCGACCGTCTATCGTTATATTGACTGG------------------------CTGATTACTGTGCCGCTCTTGATGGTGGAATTCTTCCTCATCTTGTCGGCC---------ATC---ACCGCTGTTCCGGCG---CGCGTC------------------------------------TTCTGGCGC---CTGCTTATCGGTACAACGCTGATGCTGGTATTCGGTTATCTGGGCGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GATGTG------------------ACCGCAGGC---TTTGTGCTGGGCACCGCAGCTTGGTTGTATGTTCTTTATGAAATC---------------TTC------CGT---GGTGAAGCCGGTCAGTTGAATGCCGAG------AAT---GCCAGCCCTGCTGTG---CAA---TCC---GCT---TTC---AGC---CTGATG---CGCTACATTGTGACTTTC---------------------------------------------------------------GGTTGG---------GCTATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFIERDRVDS-KWKTSLTVSGLVTLVAAVHYFYMRDVWV-----------------ATGETPTVYRYIDW--------LITVPLLMVEFFLILSA---I-TAVPA-RV------------FWR-LLIGTTLMLVFGYLGE---A------G--Y-----------M----------------------DV------TAG-FVLGTAAWLYVLYEI-----F--R-GEAGQLNAE--N-ASPAV-Q-S-A-F-S-LM-RYIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha5-IMCC14465]_DQ903160 [III-Alpha5-IMCC14465] clone_HB10032_DQ903160 gi|116294049|gb|DQ903160| Uncultured bacterium clone HB10032 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone HB10032 putative proteorhodopsin gene, partial cds. DQ903160 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 5/IMCC14465-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 5 IMCC14465-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na East China Sea surface water (ECS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na ATGGTGGCCGCTACTGTTTTCTTCTTCATCGAACGTGACCGCGTCGATTCAAAATGGAAAACCTCTTTGACGGTTTCCGGCTTGGTGACATTGGTTGCCGCCGTGCATTATTTCTATATGCGCGATGTGTGGGTCGCCACCGGCGAAACACCGACCGTCTATCGTTATATTGACTGGCTGATTACTGTGCCGCTCCTGATGGTGGAATTCTTCCTCATCTTGTCGGCCATCACCGCTGTTCCGGCGCGCGTCTTCTGGCGTCTGCTTATCGGTACAACGCTGATGCTGGTATTCGGTTATCTGGGCGAAGCCGGTTACATGGATGTGACCGCAGGCTTTGTGCTGGGCACCGCAGCTTGGTTGTATGTTCTTTATGAAATCTTCCGTGGTGAAGCCGGTCAGTTGAATGCCGAGAATGCCAGCCCTGCTGTGCAATCCGCTTTCAGCCTGATGCGCTACATTGTGACTTTCGGCTGGGCCATCTACCCA MVAATVFFFIERDRVDSKWKTSLTVSGLVTLVAAVHYFYMRDVWVATGETPTVYRYIDWLITVPLLMVEFFLILSAITAVPARVFWRLLIGTTLMLVFGYLGEAGYMDVTAGFVLGTAAWLYVLYEIFRGEAGQLNAENASPAVQSAFSLMRYIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTTTTCTTCTTCATCGAACGTGACCGCGTCGATTCA---AAATGGAAAACCTCTTTGACGGTTTCCGGCTTGGTGACATTGGTTGCCGCCGTGCATTATTTCTATATGCGCGATGTGTGGGTC---------------------------------------------------GCCACCGGCGAAACACCGACCGTCTATCGTTATATTGACTGG------------------------CTGATTACTGTGCCGCTCCTGATGGTGGAATTCTTCCTCATCTTGTCGGCC---------ATC---ACCGCTGTTCCGGCG---CGCGTC------------------------------------TTCTGGCGT---CTGCTTATCGGTACAACGCTGATGCTGGTATTCGGTTATCTGGGCGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GATGTG------------------ACCGCAGGC---TTTGTGCTGGGCACCGCAGCTTGGTTGTATGTTCTTTATGAAATC---------------TTC------CGT---GGTGAAGCCGGTCAGTTGAATGCCGAG------AAT---GCCAGCCCTGCTGTG---CAA---TCC---GCT---TTC---AGC---CTGATG---CGCTACATTGTGACTTTC---------------------------------------------------------------GGCTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFIERDRVDS-KWKTSLTVSGLVTLVAAVHYFYMRDVWV-----------------ATGETPTVYRYIDW--------LITVPLLMVEFFLILSA---I-TAVPA-RV------------FWR-LLIGTTLMLVFGYLGE---A------G--Y-----------M----------------------DV------TAG-FVLGTAAWLYVLYEI-----F--R-GEAGQLNAE--N-ASPAV-Q-S-A-F-S-LM-RYIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha5-IMCC14465]_EU915902 [III-Alpha5-IMCC14465] US120207_env_samples_EU915902 gi|229358686|gb|EU915902| Uncultured microorganism clone US120207 putative proteorhodopsin gene, partial cds Uncultured microorganism clone US120207 putative proteorhodopsin gene, partial cds EU915902 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 5/IMCC14465-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 5 IMCC14465-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_surface_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACGGCTTTCTTCTTCATTGAACGCGACCGCGTCGACTCAAAATGGAAAACCTCTTTGACGGTTTCCGGCTTGGTGACTTTGGTTGCGGCTGTGCATTATTTCTATATGCGTGATGTGTGGGTCGCCACCGGCGAAACACCGACCGTATATCGCTATATTGACTGGCTGATTACCGTGCCGTTGCTTATGGTGGAATTCTTCCTCATCTTGTCGGCCATCACCGCTGTTCCGGCGCGCGTCTTCTGGCGTCTGCTTATCGGTACAACTCTGATGCTGGTTTTCGGTTATCTGGGCGAAGCCGGTTACATGGATGTGACAGCGGGCTTTGTTTTGGGAACCGCAGCTTGGTTGTATGTTCTTTATGAAATCTTCCGTGGTGAAGCCGGTCAGTTGAATGCTGAGAATGCCAGCCCTGCTGTGCAATCCGCTTTCAGCCTGATGCGCTACATTGTTACATTCGGATGGGCCATTTAT MVAATAFFFIERDRVDSKWKTSLTVSGLVTLVAAVHYFYMRDVWVATGETPTVYRYIDWLITVPLLMVEFFLILSAITAVPARVFWRLLIGTTLMLVFGYLGEAGYMDVTAGFVLGTAAWLYVLYEIFRGEAGQLNAENASPAVQSAFSLMRYIVTFGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACGGCTTTCTTCTTCATTGAACGCGACCGCGTCGACTCA---AAATGGAAAACCTCTTTGACGGTTTCCGGCTTGGTGACTTTGGTTGCGGCTGTGCATTATTTCTATATGCGTGATGTGTGGGTC---------------------------------------------------GCCACCGGCGAAACACCGACCGTATATCGCTATATTGACTGG------------------------CTGATTACCGTGCCGTTGCTTATGGTGGAATTCTTCCTCATCTTGTCGGCC---------ATC---ACCGCTGTTCCGGCG---CGCGTC------------------------------------TTCTGGCGT---CTGCTTATCGGTACAACTCTGATGCTGGTTTTCGGTTATCTGGGCGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GATGTG------------------ACAGCGGGC---TTTGTTTTGGGAACCGCAGCTTGGTTGTATGTTCTTTATGAAATC---------------TTC------CGT---GGTGAAGCCGGTCAGTTGAATGCTGAG------AAT---GCCAGCCCTGCTGTG---CAA---TCC---GCT---TTC---AGC---CTGATG---CGCTACATTGTTACATTC---------------------------------------------------------------GGATGG---------GCCATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFIERDRVDS-KWKTSLTVSGLVTLVAAVHYFYMRDVWV-----------------ATGETPTVYRYIDW--------LITVPLLMVEFFLILSA---I-TAVPA-RV------------FWR-LLIGTTLMLVFGYLGE---A------G--Y-----------M----------------------DV------TAG-FVLGTAAWLYVLYEI-----F--R-GEAGQLNAE--N-ASPAV-Q-S-A-F-S-LM-RYIVTF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Alpha5-IMCC14465]_1105140640298 [III-Alpha5-IMCC14465] JCVI_ORF_1105140640298_GS021_Coastal_2m jcvi|1105140640298| 1105140640298 JCVI ORF 1105140640298 1105140640298 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 5/IMCC14465-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 5 IMCC14465-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 19-janv-04 Coastal/2m_depth/S_30.7_psu/GS021/Gulf_of_Panama/Eastern_Tropical_Pacific Pacific Ocean marine 8.129167 -79.69111 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TTGGAAGTTACTGCTGCAGCTTTAGCTTTCTCTGGTATGCCGTCGCTGGCCATTGCGGCAGATGCCAATCTTCAGTCCGACGATTTTGTCGGCATTTCTTTTTGGTTGATTTCAATGGCCCTGGTGGCTTCAACCGTTTTCTTCTTTATCGAGCGTGACCGCGTCGACTCAAAATGGAAAACCTCTCTGACGGTTTCCGGCTTGGTGACATTGGTTGCCGCCGTGCACTATTTCTATATGCGCGATGTTTGGGTCTCGACAGGCGAAACACCAACCGTTTATCGTTATATTGACTGGCTGATCACAGTACCGCTTTTGATGGTAGAATTCTTCCTCATCTTGTCGGCGATCACAGCTGTTCCGGCACGTGTTTTCTGGAAACTGCTCATTGGTACAACGGCAATGCTGGTTTTCGGTTATCTCGGCGAAGCAGGTTACATGGATGTAACTGCCGGTTTCGTTCTTGGAACCGCGGCTTGGATATACGTATTGTATGAAATCTTTAAAGGCGAAGCAGGACAGCTTAATGCTGAAAATGCCAGCCCGGCGGTGCAATCTGCTTTCAACCTGATGCGTAACATTGTTACCTTCGGTTGGGCAATTTATCCACTTGGCTATTTGATGGGTTATATGATGGGCAGCGTCGATGCAGACACGCTGAACATTATTTACAACCTCGCCGACGTGCTGAACAAGATCGCCTTTGGTCTGATCATCTGGCACGTTGCTGTTACGGAAAGTAAAGTTAAA LEVTAAALAFSGMPSLAIAADANLQSDDFVGISFWLISMALVASTVFFFIERDRVDSKWKTSLTVSGLVTLVAAVHYFYMRDVWVSTGETPTVYRYIDWLITVPLLMVEFFLILSAITAVPARVFWKLLIGTTAMLVFGYLGEAGYMDVTAGFVLGTAAWIYVLYEIFKGEAGQLNAENASPAVQSAFNLMRNIVTFGWAIYPLGYLMGYMMGSVDADTLNIIYNLADVLNKIAFGLIIWHVAVTESKVK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGAAGTTACTGCTGCAGCTTTAGCTTTCTCTGGTATGCCGTCGCTGGCCATTGCGGCAGATGCCAATCTTCAGTCCGACGATTTTGTCGGCATTTCTTTTTGGTTGATTTCAATGGCCCTGGTGGCTTCAACCGTTTTCTTCTTTATCGAGCGTGACCGCGTCGACTCA---AAATGGAAAACCTCTCTGACGGTTTCCGGCTTGGTGACATTGGTTGCCGCCGTGCACTATTTCTATATGCGCGATGTTTGGGTC---------------------------------------------------TCGACAGGCGAAACACCAACCGTTTATCGTTATATTGACTGG------------------------CTGATCACAGTACCGCTTTTGATGGTAGAATTCTTCCTCATCTTGTCGGCG---------ATC---ACAGCTGTTCCGGCA---CGTGTT------------------------------------TTCTGGAAA---CTGCTCATTGGTACAACGGCAATGCTGGTTTTCGGTTATCTCGGCGAA---------GCA------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GATGTA------------------ACTGCCGGT---TTCGTTCTTGGAACCGCGGCTTGGATATACGTATTGTATGAAATC---------------TTT------AAA---GGCGAAGCAGGACAGCTTAATGCTGAA------AAT---GCCAGCCCGGCGGTG---CAA---TCT---GCT---TTC---AAC---CTGATG---CGTAACATTGTTACCTTC---------------------------------------------------------------GGTTGG---------GCAATTTATCCACTTGGCTATTTGATGGGTTATATG---------------------------------------ATGGGCAGCGTCGATGCAGACACGCTGAACATTATTTACAACCTCGCCGACGTGCTGAACAAGATCGCCTTTGGTCTGATCATCTGGCACGTTGCTGTTACGGAA---AGTAAAGTTAAA--------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------LEVTAAALAFSGMPSLAIAADANLQSDDFVGISFWLISMALVASTVFFFIERDRVDS-KWKTSLTVSGLVTLVAAVHYFYMRDVWV-----------------STGETPTVYRYIDW--------LITVPLLMVEFFLILSA---I-TAVPA-RV------------FWK-LLIGTTAMLVFGYLGE---A------G--Y-----------M----------------------DV------TAG-FVLGTAAWIYVLYEI-----F--K-GEAGQLNAE--N-ASPAV-Q-S-A-F-N-LM-RNIVTF---------------------GW---AIYPLGYLMGYM-------------MGSVDADTLNIIYNLADVLNKIAFGLIIWHVAVTE-SKVK------------------------------------- [III-Alpha5-IMCC14465]_KJ926207 [III-Alpha5-IMCC14465] RHOMEO_AG_OTU22 gb|KJ926207| Uncultured bacterium cloneRHOMEO AG OTU22 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU22 putative proteorhodopsin gene, partial cds KJ926207 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 5/IMCC14465-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 5 IMCC14465-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGCTGATTACCGTGCCATTGCTGATGGTTGAGTTCTTCCTCATCTTGTCGGCCATCACGAAAGTTCCGGCTGGCGTGTTCTGGCGTCTGCTGGTGGGTACAACTGTCATGCTGGTGTTCGGCTACCTCGGCGAAGCAGGTTACATGAATGTAACGCTTGGTTTCGTTATCGGTACCCTGGCTTGGTTCTATGTCCTTTATGAAATTTTCCTCGGCGAAGCCGGCCGTATCAATGCAGAAAATGCCAGCCCAGCTGTGCAGTCTGCCTTTAAAATAATGCGCAACATTGTGACCTTC WLITVPLLMVEFFLILSAITKVPAGVFWRLLVGTTVMLVFGYLGEAGYMNVTLGFVIGTLAWFYVLYEIFLGEAGRINAENASPAVQSAFKIMRNIVTF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATTACCGTGCCATTGCTGATGGTTGAGTTCTTCCTCATCTTGTCGGCC---------ATC---ACGAAAGTTCCGGCT---GGCGTG------------------------------------TTCTGGCGT---CTGCTGGTGGGTACAACTGTCATGCTGGTGTTCGGCTACCTCGGCGAA---------GCA------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTTGGT---TTCGTTATCGGTACCCTGGCTTGGTTCTATGTCCTTTATGAAATT---------------TTC------CTC---GGCGAAGCCGGCCGTATCAATGCAGAA------AAT---GCCAGCCCAGCTGTG---CAG---TCT---GCC---TTT---AAA---ATAATG---CGCAACATTGTGACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFFLILSA---I-TKVPA-GV------------FWR-LLVGTTVMLVFGYLGE---A------G--Y-----------M----------------------NV------TLG-FVIGTLAWFYVLYEI-----F--L-GEAGRINAE--N-ASPAV-Q-S-A-F-K-IM-RNIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha5-IMCC14465]_NZ_ALYF01000003 [III-Alpha5-IMCC14465] 402819754_832067_832822_Alphaproteobacterium_IMCC14465_3_WGS gi|402819754|gb|NZ_ALYF01000003| Alpha proteobacterium IMCC14465 IMCC14465 3, whole genome shotgun sequence Alpha proteobacterium IMCC14465 IMCC14465 3, whole genome shotgun sequence NZ_ALYF01000003 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 5/IMCC14465-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 5 IMCC14465-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Alphaproteobacteria] taxon:1220535 genomic_DNA strain 10-May-2013 Aug2010 #na China Sea marine 36.578272 130.056052 #na #na #na #na #na ATGAAATTTCTGCACTTTAAATTGCCAATGATGGCACTTGCTTTAGTAATGTTGCCAAGCATGGCATTCGCCTCAGGTAACCTTGATTCCAATGATTTCACTGGAATGTCATTCTGGCTTATCTCGATGGCTCTTGTCGCTTCGACAGTGTTTTTCTTAATCGAACGCGACCGTGTGGCCGCCAAATGGAAGACGTCTCTGACTGTTTCCGGTCTGGTGACACTTATCGCCGCCGTTCACTATTTCTATATGCGTGACGTATGGGTTTCTACCGGTACTTCACCTACAGAATTCCGTTACATCGACTGGTTGCTGACTGTGCCGCTTCTGATGGTTGAGTTTTTCCTCATCCTCTCAGCGATTGCAAAAGTACCTGCCGGTGTATTCTGGAGACTGCTAATTTTCACAACCTTGATGCTTATCTTCGGTTACCTCGGAGAGTCCGGCAAAATGAATGTCATGGCCGGTTTCGTCCTTGGTATGATTGCTTGGTTTATTGTTCTGTATGAAATCTTCGCAGGTGAAGCCAGCAAAATTAGTGCTGAGCAAGCTAGTGAAACCGTACAGAAAGCATTCAATCTGATGCGTTGGATTGTGACAATCGGTTGGGCTATTTACCCACTCGGTTATGCGCTTGGTTACTTCATGGGTGGTGTCGATGGCGCCAGCTTGAACCTGATCTACAACTTGGCTGACTTTTTGAATAAGATCGCTTTCGGTGTCATCATCTGGCACGTTGCTGTATCTGAATCT MKFLHFKLPMMALALVMLPSMAFASGNLDSNDFTGMSFWLISMALVASTVFFLIERDRVAAKWKTSLTVSGLVTLIAAVHYFYMRDVWVSTGTSPTEFRYIDWLLTVPLLMVEFFLILSAIAKVPAGVFWRLLIFTTLMLIFGYLGESGKMNVMAGFVLGMIAWFIVLYEIFAGEASKISAEQASETVQKAFNLMRWIVTIGWAIYPLGYALGYFMGGVDGASLNLIYNLADFLNKIAFGVIIWHVAVSES ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAATTTCTGCACTTTAAATTGCCAATGATGGCACTTGCTTTAGTAATGTTGCCAAGCATGGCATTCGCCTCA---GGTAACCTTGATTCCAATGATTTCACTGGAATGTCATTCTGGCTTATCTCGATGGCTCTTGTCGCTTCGACAGTGTTTTTCTTAATCGAACGCGACCGTGTGGCCGCC---AAATGGAAGACGTCTCTGACTGTTTCCGGTCTGGTGACACTTATCGCCGCCGTTCACTATTTCTATATGCGTGACGTATGGGTT---------------------------------------------------TCTACCGGTACTTCACCTACAGAATTCCGTTACATCGACTGG------------------------TTGCTGACTGTGCCGCTTCTGATGGTTGAGTTTTTCCTCATCCTCTCAGCG---------ATT---GCAAAAGTACCTGCC---GGTGTA------------------------------------TTCTGGAGA---CTGCTAATTTTCACAACCTTGATGCTTATCTTCGGTTACCTCGGAGAG---------TCC------------------GGC------AAA---------------------------------ATG------------------------------------------------------------------AATGTC------------------ATGGCCGGT---TTCGTCCTTGGTATGATTGCTTGGTTTATTGTTCTGTATGAAATC---------------TTC------GCA---GGTGAAGCCAGCAAAATTAGTGCTGAG------CAA---GCTAGTGAAACCGTA---CAG---AAA---GCA---TTC---AAT---CTGATG---CGTTGGATTGTGACAATC---------------------------------------------------------------GGTTGG---------GCTATTTACCCACTCGGTTATGCGCTTGGTTACTTC---------------------------------------ATGGGTGGTGTCGATGGCGCCAGCTTGAACCTGATCTACAACTTGGCTGACTTTTTGAATAAGATCGCTTTCGGTGTCATCATCTGGCACGTTGCTGTATCTGAA---TCT------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------MKFLHFKLPMMALALVMLPSMAFAS-GNLDSNDFTGMSFWLISMALVASTVFFLIERDRVAA-KWKTSLTVSGLVTLIAAVHYFYMRDVWV-----------------STGTSPTEFRYIDW--------LLTVPLLMVEFFLILSA---I-AKVPA-GV------------FWR-LLIFTTLMLIFGYLGE---S------G--K-----------M----------------------NV------MAG-FVLGMIAWFIVLYEI-----F--A-GEASKISAE--Q-ASETV-Q-K-A-F-N-LM-RWIVTI---------------------GW---AIYPLGYALGYF-------------MGGVDGASLNLIYNLADFLNKIAFGVIIWHVAVSE-S---------------------------------------- [III-Alpha5-IMCC14465]_ALYF01000003 [III-Alpha5-IMCC14465] Alphaproteobacterium_IMCC14465_3_WGS_ALYF01000003 gi|402510497|gb|ALYF01000003| Alpha proteobacterium IMCC14465 IMCC14465 3, whole genome shotgun sequence Alpha proteobacterium IMCC14465 IMCC14465 3, whole genome shotgun sequence ALYF01000003 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 5/IMCC14465-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 5 IMCC14465-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Alphaproteobacteria] taxon:1220535 genomic_DNA strain 28-Aug-2012 Aug2010 seawater China Sea marine 36.578272 130.056052 Genome Sequence of Strain IMCC14465, Isolated from the East Sea, Belonging to the PS1 Clade of Alphaproteobacteria Yang,S.J., Kang,I. and Cho,J.C. J. Bacteriol. 194 (24), 69526953 (2012) 23209213 #na ATGAAATTTCTGCACTTTAAATTGCCAATGATGGCACTTGCTTTAGTAATGTTGCCAAGCATGGCATTCGCCTCAGGTAACCTTGATTCCAATGATTTCACTGGAATGTCATTCTGGCTTATCTCGATGGCTCTTGTCGCTTCGACAGTGTTTTTCTTAATCGAACGCGACCGTGTGGCCGCCAAATGGAAGACGTCTCTGACTGTTTCCGGTCTGGTGACACTTATCGCCGCCGTTCACTATTTCTATATGCGTGACGTATGGGTTTCTACCGGTACTTCACCTACAGAATTCCGTTACATCGACTGGTTGCTGACTGTGCCGCTTCTGATGGTTGAGTTTTTCCTCATCCTCTCAGCGATTGCAAAAGTACCTGCCGGTGTATTCTGGAGACTGCTAATTTTCACAACCTTGATGCTTATCTTCGGTTACCTCGGAGAGTCCGGCAAAATGAATGTCATGGCCGGTTTCGTCCTTGGTATGATTGCTTGGTTTATTGTTCTGTATGAAATCTTCGCAGGTGAAGCCAGCAAAATTAGTGCTGAGCAAGCTAGTGAAACCGTACAGAAAGCATTCAATCTGATGCGTTGGATTGTGACAATCGGTTGGGCTATTTACCCACTCGGTTATGCGCTTGGTTACTTCATGGGTGGTGTCGATGGCGCCAGCTTGAACCTGATCTACAACTTGGCTGACTTTTTGAATAAGATCGCTTTCGGTGTCATCATCTGGCACGTTGCTGTATCTGAATCT MKFLHFKLPMMALALVMLPSMAFASGNLDSNDFTGMSFWLISMALVASTVFFLIERDRVAAKWKTSLTVSGLVTLIAAVHYFYMRDVWVSTGTSPTEFRYIDWLLTVPLLMVEFFLILSAIAKVPAGVFWRLLIFTTLMLIFGYLGESGKMNVMAGFVLGMIAWFIVLYEIFAGEASKISAEQASETVQKAFNLMRWIVTIGWAIYPLGYALGYFMGGVDGASLNLIYNLADFLNKIAFGVIIWHVAVSES ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAATTTCTGCACTTTAAATTGCCAATGATGGCACTTGCTTTAGTAATGTTGCCAAGCATGGCATTCGCCTCA---GGTAACCTTGATTCCAATGATTTCACTGGAATGTCATTCTGGCTTATCTCGATGGCTCTTGTCGCTTCGACAGTGTTTTTCTTAATCGAACGCGACCGTGTGGCCGCC---AAATGGAAGACGTCTCTGACTGTTTCCGGTCTGGTGACACTTATCGCCGCCGTTCACTATTTCTATATGCGTGACGTATGGGTT---------------------------------------------------TCTACCGGTACTTCACCTACAGAATTCCGTTACATCGACTGG------------------------TTGCTGACTGTGCCGCTTCTGATGGTTGAGTTTTTCCTCATCCTCTCAGCG---------ATT---GCAAAAGTACCTGCC---GGTGTA------------------------------------TTCTGGAGA---CTGCTAATTTTCACAACCTTGATGCTTATCTTCGGTTACCTCGGAGAG---------TCC------------------GGC------AAA---------------------------------ATG------------------------------------------------------------------AATGTC------------------ATGGCCGGT---TTCGTCCTTGGTATGATTGCTTGGTTTATTGTTCTGTATGAAATC---------------TTC------GCA---GGTGAAGCCAGCAAAATTAGTGCTGAG------CAA---GCTAGTGAAACCGTA---CAG---AAA---GCA---TTC---AAT---CTGATG---CGTTGGATTGTGACAATC---------------------------------------------------------------GGTTGG---------GCTATTTACCCACTCGGTTATGCGCTTGGTTACTTC---------------------------------------ATGGGTGGTGTCGATGGCGCCAGCTTGAACCTGATCTACAACTTGGCTGACTTTTTGAATAAGATCGCTTTCGGTGTCATCATCTGGCACGTTGCTGTATCTGAA---TCT------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------MKFLHFKLPMMALALVMLPSMAFAS-GNLDSNDFTGMSFWLISMALVASTVFFLIERDRVAA-KWKTSLTVSGLVTLIAAVHYFYMRDVWV-----------------STGTSPTEFRYIDW--------LLTVPLLMVEFFLILSA---I-AKVPA-GV------------FWR-LLIFTTLMLIFGYLGE---S------G--K-----------M----------------------NV------MAG-FVLGMIAWFIVLYEI-----F--A-GEASKISAE--Q-ASETV-Q-K-A-F-N-LM-RWIVTI---------------------GW---AIYPLGYALGYF-------------MGGVDGASLNLIYNLADFLNKIAFGVIIWHVAVSE-S---------------------------------------- [III-Alpha4-c]_JX863143 [III-Alpha4-c] MALINA_OTU04_344_L_env_samples_JX863143 gi|425477236|gb|JX863143| Uncultured bacterium clone MALINA OTU04 344 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU04 344 L putative proteorhodopsin gene, partial cds JX863143 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 08-juil-09 0m_depth Pacific Ocean marine 53.36 -159.29 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTCATCACAGTTCCACTGCTGATGGTTGAATTCTACCTCATTTTACGGGCGATTACTAACGTCTCCGGTGGCATTTTTTGGCGCTTAATGATCGGTACGATTGTTATGCTGGCTGCAGGTTACATGGGCGAAGCCGGCTACATCAATGCGATGCTTGGTTTCATTATTGGGATGGCCGGTTGGGCATATATTCTATATGAAATCTTCCTTGGTGAAGCAGGGCAGGTTGCATCCGAACAGGCGCCTGAGTCAGTTCAAAGCGCATTTAGCACAATGCGGTGGATCGTATCAATT WLITVPLLMVEFYLILRAITNVSGGIFWRLMIGTIVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFLGEAGQVASEQAPESVQSAFSTMRWIVSI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTCATCACAGTTCCACTGCTGATGGTTGAATTCTACCTCATTTTACGGGCG---------ATT---ACTAACGTCTCCGGT---GGCATT------------------------------------TTTTGGCGC---TTAATGATCGGTACGATTGTTATGCTGGCTGCAGGTTACATGGGCGAA---------GCC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCG------------------ATGCTTGGT---TTCATTATTGGGATGGCCGGTTGGGCATATATTCTATATGAAATC---------------TTC------CTT---GGTGAAGCAGGGCAGGTTGCATCCGAA------CAG---GCGCCTGAGTCAGTT---CAA---AGC---GCA---TTT---AGC---ACAATG---CGGTGGATCGTATCAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGTIVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--L-GEAGQVASE--Q-APESV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_FJ618977 [III-Alpha4-c] PR_707_07_12_env_samples_FJ618977 gi|223046837|gb|FJ618977| Uncultured bacterium clone PR 707 07 12 proteorhodopsin gene, partial cds Uncultured bacterium clone PR 707 07 12 proteorhodopsin gene, partial cds FJ618977 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-juil-09 #na Arctic_Ocean Arctic Ocean marine 71.37 -156.68 Photoheterotrophic microbes in the Arctic Ocean in summer and winter Cottrell,M.T. and Kirchman,D.L. Appl. Environ. Microbiol. 75 (15), 49584966 (2009) 19502441 #na TATATCGATTGGCTCATCACAGTTCCACTGCTGATGGTTGAATTCTACCTCATTTTACGGGCGATTACTAACGTCTCCGGTGGCATTTTTTGGCGCTTAATGATCGGTACGATTGTTATGCTGGCTGCAGGTTACATGGGCGAAGCCGGCTACATCAATGCGATGCTTGGTTTCATTATTGGGATGGCCGGTTGGGCATATATTCTATATGAAATCTTCCTTGGTGAAGCAGGGCAGGTTGCATCCGAACAGGCGCCTGAGTCAGTTCAAAGCGCATTTAGCACAATGCGGTGGATCGTATCAATTGGGTGGGCGATATAT YIDWLITVPLLMVEFYLILRAITNVSGGIFWRLMIGTIVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFLGEAGQVASEQAPESVQSAFSTMRWIVSIGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATCGATTGG------------------------CTCATCACAGTTCCACTGCTGATGGTTGAATTCTACCTCATTTTACGGGCG---------ATT---ACTAACGTCTCCGGT---GGCATT------------------------------------TTTTGGCGC---TTAATGATCGGTACGATTGTTATGCTGGCTGCAGGTTACATGGGCGAA---------GCC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCG------------------ATGCTTGGT---TTCATTATTGGGATGGCCGGTTGGGCATATATTCTATATGAAATC---------------TTC------CTT---GGTGAAGCAGGGCAGGTTGCATCCGAA------CAG---GCGCCTGAGTCAGTT---CAA---AGC---GCA---TTT---AGC---ACAATG---CGGTGGATCGTATCAATT---------------------------------------------------------------GGGTGG---------GCGATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YIDW--------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGTIVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--L-GEAGQVASE--Q-APESV-Q-S-A-F-S-TM-RWIVSI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Alpha4-c]_FJ862951 [III-Alpha4-c] clone_07_FJ862951 gi|226897302|gb|FJ862951| Uncultured bacterium clone 07 putative proteorhodopsin mRNA, partial cds. Uncultured bacterium clone 07 putative proteorhodopsin mRNA, partial cds. FJ862951 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 07-DEC-2009 #na coastal seawater Atlantic Ocean marine 38.8489 -75.1076 Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTCGACTGGCTCATCACAGTTCCACTGCTGATGGTTGAATTCTGCCTCATTTTACGGGCGATTACTAACGTCTCCGGTGGCATTTTTTGGCGCTTAATGATCGGTACGATTGTTATGTTGGCTGCAGGTTACATGGGCGAAGCCGGCTACATCAATGCGATGCTTGGTTTCATTATTGGGATGGCCGGTTGGGCATATATTCTATATGAAATCTTCCTTGGTGAAGCAGGGCAGGTTGCATCCGAACAGGCGCCTGAGTCAGTTCAAAGCGCATTTAGCACAATGCGGTGGATCGTATCAATTGGTTGGGCAATATATGCTCGA VDWLITVPLLMVEFCLILRAITNVSGGIFWRLMIGTIVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFLGEAGQVASEQAPESVQSAFSTMRWIVSIGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCGACTGG------------------------CTCATCACAGTTCCACTGCTGATGGTTGAATTCTGCCTCATTTTACGGGCG---------ATT---ACTAACGTCTCCGGT---GGCATT------------------------------------TTTTGGCGC---TTAATGATCGGTACGATTGTTATGTTGGCTGCAGGTTACATGGGCGAA---------GCC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCG------------------ATGCTTGGT---TTCATTATTGGGATGGCCGGTTGGGCATATATTCTATATGAAATC---------------TTC------CTT---GGTGAAGCAGGGCAGGTTGCATCCGAA------CAG---GCGCCTGAGTCAGTT---CAA---AGC---GCA---TTT---AGC---ACAATG---CGGTGGATCGTATCAATT---------------------------------------------------------------GGTTGG---------GCAATATATGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPLLMVEFCLILRA---I-TNVSG-GI------------FWR-LMIGTIVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--L-GEAGQVASE--Q-APESV-Q-S-A-F-S-TM-RWIVSI---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [III-Alpha4-c]_FJ862970 [III-Alpha4-c] clone_28_FJ862970 gi|226897340|gb|FJ862970| Uncultured bacterium clone 28 putative proteorhodopsin mRNA, partial cds. Uncultured bacterium clone 28 putative proteorhodopsin mRNA, partial cds. FJ862970 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 07-DEC-2009 #na coastal seawater Atlantic Ocean marine 38.8489 -75.1076 Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTCGACTGGCTCATCACAGTTCCACTGCTGATGGTTGAATTCTACCTCATTTTACGGGCGATTACTAACGTCTCCGGTGGCATTTTTTGGCGCTTAATGATCGGTACGATTGTTATGTTGGCTGCAGGTTACATGGGCGAAGCCGGCTACATCAATGCGATGCTTGGTTTCATTATTGGGATGGCCGGTTGGGCATATCTTCTATATGAAATCTTCCTTGGTGAAGCAGGGCAGGTTGCATCCGAACAGGCGCCTGAGTCAGTTCAAAGCGCATTTAGCACAATGCGGTGGATCGTATCAATTGGGTGGGCGATATACGCTCGA VDWLITVPLLMVEFYLILRAITNVSGGIFWRLMIGTIVMLAAGYMGEAGYINAMLGFIIGMAGWAYLLYEIFLGEAGQVASEQAPESVQSAFSTMRWIVSIGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCGACTGG------------------------CTCATCACAGTTCCACTGCTGATGGTTGAATTCTACCTCATTTTACGGGCG---------ATT---ACTAACGTCTCCGGT---GGCATT------------------------------------TTTTGGCGC---TTAATGATCGGTACGATTGTTATGTTGGCTGCAGGTTACATGGGCGAA---------GCC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCG------------------ATGCTTGGT---TTCATTATTGGGATGGCCGGTTGGGCATATCTTCTATATGAAATC---------------TTC------CTT---GGTGAAGCAGGGCAGGTTGCATCCGAA------CAG---GCGCCTGAGTCAGTT---CAA---AGC---GCA---TTT---AGC---ACAATG---CGGTGGATCGTATCAATT---------------------------------------------------------------GGGTGG---------GCGATATACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGTIVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYLLYEI-----F--L-GEAGQVASE--Q-APESV-Q-S-A-F-S-TM-RWIVSI---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [III-Alpha4-c]_FJ862967 [III-Alpha4-c] clone_25_FJ862967 gi|226897334|gb|FJ862967| Uncultured bacterium clone 25 putative proteorhodopsin mRNA, partial cds. Uncultured bacterium clone 25 putative proteorhodopsin mRNA, partial cds. FJ862967 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 07-DEC-2009 #na coastal seawater Atlantic Ocean marine 38.8489 -75.1076 Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTCGACTGGCTCATTACAGTTCCACTGCTGATGGTTGAATTCTACCTCATTTTACGGGCGATTACTAACGTCTCCGGTGGCATTTTTTGGCGCTTAATGATCGGTACGATTGTTATGTTGGCTGCAGGTTACATGGGCGAAGCCGGCTACATCAATGCGATGCTTGGTTTCATTATTGGGATGGCCGGTTGGGCATATATTCTATATGAAATCTTCCTTGGTGAAGCAGGGCAGGTTGCATCCGAACAGGCGCCTGAGTCAGTTCAAAGCGCATTTAGCACAATGCGGTGGATCGTATCAATTGGGTGGGCCATATACGCTCGA VDWLITVPLLMVEFYLILRAITNVSGGIFWRLMIGTIVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFLGEAGQVASEQAPESVQSAFSTMRWIVSIGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCGACTGG------------------------CTCATTACAGTTCCACTGCTGATGGTTGAATTCTACCTCATTTTACGGGCG---------ATT---ACTAACGTCTCCGGT---GGCATT------------------------------------TTTTGGCGC---TTAATGATCGGTACGATTGTTATGTTGGCTGCAGGTTACATGGGCGAA---------GCC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCG------------------ATGCTTGGT---TTCATTATTGGGATGGCCGGTTGGGCATATATTCTATATGAAATC---------------TTC------CTT---GGTGAAGCAGGGCAGGTTGCATCCGAA------CAG---GCGCCTGAGTCAGTT---CAA---AGC---GCA---TTT---AGC---ACAATG---CGGTGGATCGTATCAATT---------------------------------------------------------------GGGTGG---------GCCATATACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGTIVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--L-GEAGQVASE--Q-APESV-Q-S-A-F-S-TM-RWIVSI---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [III-Alpha4-c]_FJ862918 [III-Alpha4-c] 06_env_samples_FJ862918 gi|226897380|gb|FJ862918| Uncultured bacterium clone 06 putative proteorhodopsin gene, partial cds Uncultured bacterium clone 06 putative proteorhodopsin gene, partial cds FJ862918 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 07-Dec-2009 #na coastal_seawater Atlantic Ocean marine 38.8489 -75.1076 Lightdependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTTGATTGGCTCATCACAGTTCCACTGCTGATGGTTGAATTCTACCTCATTTTACGGGCGATTACTAACGTCTCCGGTGGCATTTTTTGGCGCTTAATGATCGGTACGATTGTTATGTTGGCTGCAGGTTATATGGGCGAAGCCGGCTACATCAATGCGATGCTTGGTTTCATTATTGGGATGGCCGGTTGGGCATATATTCTATATGAAATCTTCCTTGGTGAAGCAGGGCAGGTTGCATCCGAACAGGCGCCTGAGTCAGTTCAAAGCGCATTTAGCACAATGCGGTGGATCGTATCAATTGGCTGGGCCATATACGCTCGA VDWLITVPLLMVEFYLILRAITNVSGGIFWRLMIGTIVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFLGEAGQVASEQAPESVQSAFSTMRWIVSIGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGATTGG------------------------CTCATCACAGTTCCACTGCTGATGGTTGAATTCTACCTCATTTTACGGGCG---------ATT---ACTAACGTCTCCGGT---GGCATT------------------------------------TTTTGGCGC---TTAATGATCGGTACGATTGTTATGTTGGCTGCAGGTTATATGGGCGAA---------GCC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCG------------------ATGCTTGGT---TTCATTATTGGGATGGCCGGTTGGGCATATATTCTATATGAAATC---------------TTC------CTT---GGTGAAGCAGGGCAGGTTGCATCCGAA------CAG---GCGCCTGAGTCAGTT---CAA---AGC---GCA---TTT---AGC---ACAATG---CGGTGGATCGTATCAATT---------------------------------------------------------------GGCTGG---------GCCATATACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGTIVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--L-GEAGQVASE--Q-APESV-Q-S-A-F-S-TM-RWIVSI---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [III-Alpha4-c]_FJ862940 [III-Alpha4-c] 38_env_samples_FJ862940 gi|226897424|gb|FJ862940| Uncultured bacterium clone 38 putative proteorhodopsin gene, partial cds Uncultured bacterium clone 38 putative proteorhodopsin gene, partial cds FJ862940 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 07-Dec-2009 #na coastal_seawater Atlantic Ocean marine 38.8489 -75.1076 Lightdependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTCGACTGGCTCATCACAGTTCCACTGCTGATGGTTGAATTCTACCTCATTTTACGGGCGATTACTAACGTCTCCGGTGGCATTTTTTGGCGCTTAATGATCGGTACGATTGTTATGTTGGCTGCAGGTTATATGGGCGAAGCCGGCTACATCAATGCGATGCTTGGTTTCATTATTGGGATGGCCGGTTGGGCATATATTCTATATGAAATCTTCCTTGGTGAAGCAGGGCAGGTTGCATCCGAACAGGCGCCTGAGTCAGTTCAAAGCGCATTTAGCACAATGCGGTGGATCGTATCAATTGGATGGGCCATCTACGCTCGA VDWLITVPLLMVEFYLILRAITNVSGGIFWRLMIGTIVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFLGEAGQVASEQAPESVQSAFSTMRWIVSIGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCGACTGG------------------------CTCATCACAGTTCCACTGCTGATGGTTGAATTCTACCTCATTTTACGGGCG---------ATT---ACTAACGTCTCCGGT---GGCATT------------------------------------TTTTGGCGC---TTAATGATCGGTACGATTGTTATGTTGGCTGCAGGTTATATGGGCGAA---------GCC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCG------------------ATGCTTGGT---TTCATTATTGGGATGGCCGGTTGGGCATATATTCTATATGAAATC---------------TTC------CTT---GGTGAAGCAGGGCAGGTTGCATCCGAA------CAG---GCGCCTGAGTCAGTT---CAA---AGC---GCA---TTT---AGC---ACAATG---CGGTGGATCGTATCAATT---------------------------------------------------------------GGATGG---------GCCATCTACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGTIVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--L-GEAGQVASE--Q-APESV-Q-S-A-F-S-TM-RWIVSI---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [III-Alpha4-c]_FJ862976 [III-Alpha4-c] clone_36_FJ862976 gi|226897352|gb|FJ862976| Uncultured bacterium clone 36 putative proteorhodopsin mRNA, partial cds. Uncultured bacterium clone 36 putative proteorhodopsin mRNA, partial cds. FJ862976 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 07-DEC-2009 #na coastal seawater Atlantic Ocean marine 38.8489 -75.1076 Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTCGACTGGCTCATCACAGTTCCACTGCTGATGGTTGAATTCTACCTAATTTTACGGGCGATTACTAACGTCTCCGGTGGCATTTTTTGGCGCTTAATGATCGGTACGATTGTTATGTTGGCTGCAGGTTACATGGGCGAAGCTGGCTACATCAATGCGATGCTTGGTTTCATTATTGGGATGGCCGGTTGGGCATATATTCTATATGAAATCTTCCTTGGTGAAGCAGGGCAGGTTGCATCCGAACAGGCGCCTGAGTCAGTTCAAAGCGCATTTAGCACAATGCGGTGGATTGTATCAATTGGATGGGCCATTTACGCTCGA VDWLITVPLLMVEFYLILRAITNVSGGIFWRLMIGTIVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFLGEAGQVASEQAPESVQSAFSTMRWIVSIGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCGACTGG------------------------CTCATCACAGTTCCACTGCTGATGGTTGAATTCTACCTAATTTTACGGGCG---------ATT---ACTAACGTCTCCGGT---GGCATT------------------------------------TTTTGGCGC---TTAATGATCGGTACGATTGTTATGTTGGCTGCAGGTTACATGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCG------------------ATGCTTGGT---TTCATTATTGGGATGGCCGGTTGGGCATATATTCTATATGAAATC---------------TTC------CTT---GGTGAAGCAGGGCAGGTTGCATCCGAA------CAG---GCGCCTGAGTCAGTT---CAA---AGC---GCA---TTT---AGC---ACAATG---CGGTGGATTGTATCAATT---------------------------------------------------------------GGATGG---------GCCATTTACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGTIVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--L-GEAGQVASE--Q-APESV-Q-S-A-F-S-TM-RWIVSI---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [III-Alpha4-c]_JX863144 [III-Alpha4-c] MALINA_OTU04_042_L_env_samples_JX863144 gi|425477238|gb|JX863144| Uncultured bacterium clone MALINA OTU04 042 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU04 042 L putative proteorhodopsin gene, partial cds JX863144 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 07Aug2009 5m_depth Arctic Ocean marine 70.91 -128.92 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTCATCACAGTTCCACTGCTGATGGTTGAATTCTACCTCATTTTACGGGCGATTACTAACGTCTCCGGTGGCATTTTTTGGCGCTTAATGATCGGTACGATTGTTATGTTGGCTGCAGGTTACATGGGCGAAGCCGGCTACATCAATGCGATGCTTGGTTTCATTATTGGGATGGCCGGTTGGGCATATATTCTATATGAAATCTTCCTTGGTGAAGCAGGGCAGGGTGCATCCGAACAGGCGCCTGAGTCAGTTCAAAGCGCATTTAGCACAATGCGGTGGATTGTATCAATT WLITVPLLMVEFYLILRAITNVSGGIFWRLMIGTIVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFLGEAGQGASEQAPESVQSAFSTMRWIVSI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTCATCACAGTTCCACTGCTGATGGTTGAATTCTACCTCATTTTACGGGCG---------ATT---ACTAACGTCTCCGGT---GGCATT------------------------------------TTTTGGCGC---TTAATGATCGGTACGATTGTTATGTTGGCTGCAGGTTACATGGGCGAA---------GCC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCG------------------ATGCTTGGT---TTCATTATTGGGATGGCCGGTTGGGCATATATTCTATATGAAATC---------------TTC------CTT---GGTGAAGCAGGGCAGGGTGCATCCGAA------CAG---GCGCCTGAGTCAGTT---CAA---AGC---GCA---TTT---AGC---ACAATG---CGGTGGATTGTATCAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGTIVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--L-GEAGQGASE--Q-APESV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_FJ862955 [III-Alpha4-c] clone_11_FJ862955 gi|226897310|gb|FJ862955| Uncultured bacterium clone 11 putative proteorhodopsin mRNA, partial cds. Uncultured bacterium clone 11 putative proteorhodopsin mRNA, partial cds. FJ862955 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 07-DEC-2009 #na coastal seawater Atlantic Ocean marine 38.8489 -75.1076 Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na ATTGATTGGCTCATCACAGTTCCACTGCTGATGGTTGAATTCTACCTCATCTTACGGGCGATTACTAACGTCTCCGGTGGCATTTTTTGGCGCTTAATGATCGGTACGATTGTTATGTTGGCTGCAGGTTACATGGGCGAAGCCGGCTACATCAATGCGATGCTTGGTTTCATTATTGGGATGGCCGGTTGGGCATATATTCTATATGAAATCTTCCTTGGTGAAGCAGGGCAGGTTGCATCCGAACAGGCGCCTGAGTCAGTTCAAAGCGCATTTAGCACAATGCGGTGGATTGTATCAATTGGCTGGGCAATATACGCTCGA IDWLITVPLLMVEFYLILRAITNVSGGIFWRLMIGTIVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFLGEAGQVASEQAPESVQSAFSTMRWIVSIGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGATTGG------------------------CTCATCACAGTTCCACTGCTGATGGTTGAATTCTACCTCATCTTACGGGCG---------ATT---ACTAACGTCTCCGGT---GGCATT------------------------------------TTTTGGCGC---TTAATGATCGGTACGATTGTTATGTTGGCTGCAGGTTACATGGGCGAA---------GCC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCG------------------ATGCTTGGT---TTCATTATTGGGATGGCCGGTTGGGCATATATTCTATATGAAATC---------------TTC------CTT---GGTGAAGCAGGGCAGGTTGCATCCGAA------CAG---GCGCCTGAGTCAGTT---CAA---AGC---GCA---TTT---AGC---ACAATG---CGGTGGATTGTATCAATT---------------------------------------------------------------GGCTGG---------GCAATATACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDW--------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGTIVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--L-GEAGQVASE--Q-APESV-Q-S-A-F-S-TM-RWIVSI---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [III-Alpha4-c]_FJ862969 [III-Alpha4-c] clone_27_FJ862969 gi|226897338|gb|FJ862969| Uncultured bacterium clone 27 putative proteorhodopsin mRNA, partial cds. Uncultured bacterium clone 27 putative proteorhodopsin mRNA, partial cds. FJ862969 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 07-DEC-2009 #na coastal seawater Atlantic Ocean marine 38.8489 -75.1076 Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTTGATTGGCTCATCACAGTTCCACTGCTGATGGTTGAATTCTACCTCATTTTACGGGCGATTACTAACGTCTCCGGTGGCATTTTTTGGCGCTTAATGATCGGTACGATTGTTATGCTGGCTGCAGGTTACATGGGCGAAGCCGGCTACATCAATGCGATGCTTGGTTTCATTATTGGGATGGCCGGTTGGGCATATATTCTATATGAAATCTTCCTTGGTGAAGCAGGGCAGGTTGCATCCGAACAGGCGCCTGAGTCAGTTCAAAGCGCATTTAGCACAATGCGGTGGATCGTGTCAATTGGGTGGGCAATCTACGCTCGA VDWLITVPLLMVEFYLILRAITNVSGGIFWRLMIGTIVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFLGEAGQVASEQAPESVQSAFSTMRWIVSIGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGATTGG------------------------CTCATCACAGTTCCACTGCTGATGGTTGAATTCTACCTCATTTTACGGGCG---------ATT---ACTAACGTCTCCGGT---GGCATT------------------------------------TTTTGGCGC---TTAATGATCGGTACGATTGTTATGCTGGCTGCAGGTTACATGGGCGAA---------GCC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCG------------------ATGCTTGGT---TTCATTATTGGGATGGCCGGTTGGGCATATATTCTATATGAAATC---------------TTC------CTT---GGTGAAGCAGGGCAGGTTGCATCCGAA------CAG---GCGCCTGAGTCAGTT---CAA---AGC---GCA---TTT---AGC---ACAATG---CGGTGGATCGTGTCAATT---------------------------------------------------------------GGGTGG---------GCAATCTACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGTIVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--L-GEAGQVASE--Q-APESV-Q-S-A-F-S-TM-RWIVSI---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [III-Alpha4-c]_FJ862985 [III-Alpha4-c] clone_48_FJ862985 gi|226897370|gb|FJ862985| Uncultured bacterium clone 48 putative proteorhodopsin mRNA, partial cds. Uncultured bacterium clone 48 putative proteorhodopsin mRNA, partial cds. FJ862985 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 07-DEC-2009 #na coastal seawater Atlantic Ocean marine 38.8489 -75.1076 Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTAGATTGGCTCATCACAGTTCCACTGCTGATGGTTGAATTCTACCTCATTTTACGGGCGATTACTAACGTCTCCGGTGGCATTTTTTGGCGCTTAATGATCGGTACGATTGTTATGTTGGCTGCAGGTTACATGGGCGAAGCCGGCTACATCAATGCGATGCTTGGTTTCATTATTGGGATGGCCGGTTGGGCATATATTCTATATGAAATCTTCCTTGGTGAAGCAGGGCAGGTTGCATCCGAACAGGCGCCTGAGTCAGTTCAAAGCGCACTTAGCACAATGCGGTGGATCGTATCAATTGGCTGGGCTATTTACGCTCGA VDWLITVPLLMVEFYLILRAITNVSGGIFWRLMIGTIVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFLGEAGQVASEQAPESVQSALSTMRWIVSIGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGATTGG------------------------CTCATCACAGTTCCACTGCTGATGGTTGAATTCTACCTCATTTTACGGGCG---------ATT---ACTAACGTCTCCGGT---GGCATT------------------------------------TTTTGGCGC---TTAATGATCGGTACGATTGTTATGTTGGCTGCAGGTTACATGGGCGAA---------GCC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCG------------------ATGCTTGGT---TTCATTATTGGGATGGCCGGTTGGGCATATATTCTATATGAAATC---------------TTC------CTT---GGTGAAGCAGGGCAGGTTGCATCCGAA------CAG---GCGCCTGAGTCAGTT---CAA---AGC---GCA---CTT---AGC---ACAATG---CGGTGGATCGTATCAATT---------------------------------------------------------------GGCTGG---------GCTATTTACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGTIVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--L-GEAGQVASE--Q-APESV-Q-S-A-L-S-TM-RWIVSI---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ926119 [III-Alpha4-c] BOUM_OTU032_env_samples gb|KJ926119| Uncultured bacterium clone BOUM OTU032 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU032 putative proteorhodopsin gene, partial cds KJ926119 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 38.96217 14.32367 #na #na #na #na #na GTTGATTGGCTCATCACAGTTCCATTGTTGATGGTTGAGTTCTATCTTATCCTGCGGGCTATCACAAATGTGTCCGGTGGCGTTTTCTGGCGCTTGATGATCGGGACATTGGTAATGTTGTCGGCCGGTTATGCCGGTGAAGCAGGATACATCAGCCCGCTAATTGGTTTTATAGTTGGAATGGCCGGATGGGCCTATATCCTTTATGAAATCTTCTTTGGCGAAGCTGGTCAGGTGGCGTCAGATCAGGCCCCAGAATCAGTCCAAAACGCTTTCTCAACAATGCGTTGGATTGTGACCATTGGCTGGGCCATATAC VDWLITVPLLMVEFYLILRAITNVSGGVFWRLMIGTLVMLSAGYAGEAGYISPLIGFIVGMAGWAYILYEIFFGEAGQVASDQAPESVQNAFSTMRWIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGATTGG------------------------CTCATCACAGTTCCATTGTTGATGGTTGAGTTCTATCTTATCCTGCGGGCT---------ATC---ACAAATGTGTCCGGT---GGCGTT------------------------------------TTCTGGCGC---TTGATGATCGGGACATTGGTAATGTTGTCGGCCGGTTATGCCGGTGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AGCCCG------------------CTAATTGGT---TTTATAGTTGGAATGGCCGGATGGGCCTATATCCTTTATGAAATC---------------TTC------TTT---GGCGAAGCTGGTCAGGTGGCGTCAGAT------CAG---GCCCCAGAATCAGTC---CAA---AAC---GCT---TTC---TCA---ACAATG---CGTTGGATTGTGACCATT---------------------------------------------------------------GGCTGG---------GCCATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPLLMVEFYLILRA---I-TNVSG-GV------------FWR-LMIGTLVMLSAGYAGE---A------G--Y-----------I----------------------SP------LIG-FIVGMAGWAYILYEI-----F--F-GEAGQVASD--Q-APESV-Q-N-A-F-S-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Alpha4-c]_FJ862983 [III-Alpha4-c] clone_45_FJ862983 gi|226897366|gb|FJ862983| Uncultured bacterium clone 45 putative proteorhodopsin mRNA, partial cds. Uncultured bacterium clone 45 putative proteorhodopsin mRNA, partial cds. FJ862983 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 07-DEC-2009 #na coastal seawater Atlantic Ocean marine 38.8489 -75.1076 Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTTGACTGGCTGATCACAGTGCCACTGCTGATGGTAGAGTTCTATCTCATCCTGCGCGCGATCACCAGTGTCTCTGGTGGCGTGTTCTGGCGTTTGATGATCGGTACGATGGTCATGTTGGCCGCAGGTTACATGGGCGAGGCCGGGTATATCAATGCGATGCTTGGTTTCATCATCGGAATGGCTGGTTGGGCTTACATTCTGTATGAAATCTTCTTGGGTGAAGCTGGTCAAGTGGCCTCCGAGCAAGCTCCGGAATCAGTTCAGTCTGCTTTTGTGACCATGCGTTGGATTGTGACCATTGGTTGGGCCATATACGCTCGA VDWLITVPLLMVEFYLILRAITSVSGGVFWRLMIGTMVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFLGEAGQVASEQAPESVQSAFVTMRWIVTIGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGACTGG------------------------CTGATCACAGTGCCACTGCTGATGGTAGAGTTCTATCTCATCCTGCGCGCG---------ATC---ACCAGTGTCTCTGGT---GGCGTG------------------------------------TTCTGGCGT---TTGATGATCGGTACGATGGTCATGTTGGCCGCAGGTTACATGGGCGAG---------GCC------------------GGG------TAT---------------------------------ATC------------------------------------------------------------------AATGCG------------------ATGCTTGGT---TTCATCATCGGAATGGCTGGTTGGGCTTACATTCTGTATGAAATC---------------TTC------TTG---GGTGAAGCTGGTCAAGTGGCCTCCGAG------CAA---GCTCCGGAATCAGTT---CAG---TCT---GCT---TTT---GTG---ACCATG---CGTTGGATTGTGACCATT---------------------------------------------------------------GGTTGG---------GCCATATACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPLLMVEFYLILRA---I-TSVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--L-GEAGQVASE--Q-APESV-Q-S-A-F-V-TM-RWIVTI---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [III-Alpha4-c]_1105137494604 [III-Alpha4-c] JCVI_ORF_1105137494604_GS003_Coastal_1m jcvi|1105137494604| 1105137494604 JCVI ORF 1105137494604 1105137494604 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 21-AUG-2003 Coastal/1m_depth/S_29.9_psu/GS003/Browns_Bank/Gulf_of_Maine/North_American_East_Coast Atlantic Ocean marine 42.85278 -66.217224 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAATACACCTACGGTCGAATCAAATTAGCGTTGGCCAGCGCCGCACTGTTAATCACACCAACTTTGGCCTCTGCGAGCGCCAATCTAGAATCAGACGATTTTGTTGGCATCTCGTTCTGGCTCATTTCCATGGCCCTCGTCGCAGCTACGGCGTTCTTCTTTATGGAGACGCAGCGCGTAGAGGGGAAATGGAAGACATCGCTGACTGTGTCCGGCCTCGTAACCTTGGTTGCAGCTGTGCATTACTTCTACATGCGCGATGTTTGGATTGAAACTGGTGCCACACCCCTCGTTTATCGCTACATCGATTGGCTGATCACAGTGCCACTGCTGATGGTAGAGTTCTATCTCATCCTACGCGCGATCACCAACGTCTCTGGTGGCGTGTTCTGGCGTTTGATGATCGGTACGATGGTCATGTTGGCCGCAGGTTACATGGGCGAGGCCGGGTATATCAATGCGATGCTTGGTTTCATCATCGGAATGGCTGGCTGGGCTTACATTCTGTATGAAATCTTCTTGGGTGAAGCTGGCCAAGTGGCCTCCGAGCAAGCTCCGGAATCAGTTCAGTCTGCTTTTGTGACCATGCGTTGGATTGTGACCATTGGTTGGGCCATCTATCCCATTGGTTATTTCATGGGTTATTTCACCGGCGCTGGACCCGAGGCTTCAGCTAACGCGCTGAACATTATTTACAACCTTGCGGACGTTGTAAACAAAATTGCGTTTGGTGTCATTATCTGGAACGTTGCCGTTACAGAATCTGACAAAGCCAGCTCTAACTGTGTGATAGAGAGAGGTGGCCTCCGGGCCACCTCTCCTCTCTCGCCTGAAATTCGGTATATC MKYTYGRIKLALASAALLITPTLASASANLESDDFVGISFWLISMALVAATAFFFMETQRVEGKWKTSLTVSGLVTLVAAVHYFYMRDVWIETGATPLVYRYIDWLITVPLLMVEFYLILRAITNVSGGVFWRLMIGTMVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFLGEAGQVASEQAPESVQSAFVTMRWIVTIGWAIYPIGYFMGYFTGAGPEASANALNIIYNLADVVNKIAFGVIIWNVAVTESDKASSNCVIERGGLRATSPLSPEIRYI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAATACACCTACGGTCGAATCAAATTAGCGTTGGCCAGCGCCGCACTGTTAATCACACCAACTTTGGCCTCTGCGAGCGCCAATCTAGAATCAGACGATTTTGTTGGCATCTCGTTCTGGCTCATTTCCATGGCCCTCGTCGCAGCTACGGCGTTCTTCTTTATGGAGACGCAGCGCGTAGAGGGG---AAATGGAAGACATCGCTGACTGTGTCCGGCCTCGTAACCTTGGTTGCAGCTGTGCATTACTTCTACATGCGCGATGTTTGGATT------------------------------GAAACT---------------------GGTGCCACACCCCTCGTTTATCGCTACATCGATTGG------------------------CTGATCACAGTGCCACTGCTGATGGTAGAGTTCTATCTCATCCTACGCGCG---------ATC---ACCAACGTCTCTGGT---GGCGTG------------------------------------TTCTGGCGT---TTGATGATCGGTACGATGGTCATGTTGGCCGCAGGTTACATGGGCGAG---------GCC------------------GGG------TAT---------------------------------ATC------------------------------------------------------------------AATGCG------------------ATGCTTGGT---TTCATCATCGGAATGGCTGGCTGGGCTTACATTCTGTATGAAATC---------------TTC------TTG---GGTGAAGCTGGCCAAGTGGCCTCCGAG------CAA---GCTCCGGAATCAGTT---CAG---TCT---GCT---TTT---GTG---ACCATG---CGTTGGATTGTGACCATT---------------------------------------------------------------GGTTGG---------GCCATCTATCCCATTGGTTATTTCATGGGTTATTTCACC------------------------------GGCGCTGGACCCGAGGCTTCAGCTAACGCGCTGAACATTATTTACAACCTTGCGGACGTTGTAAACAAAATTGCGTTTGGTGTCATTATCTGGAACGTTGCCGTTACAGAA---TCTGACAAAGCCAGCTCTAACTGTGTG---------------------ATAGAGAGAGGTGGCCTCCGGGCCACCTCTCCTCTCTCGCCTGAAATTCGGTATATC------------------ ------------------------------------------------------------------------------------------MKYTYGRIKLALASAALLITPTLASASANLESDDFVGISFWLISMALVAATAFFFMETQRVEG-KWKTSLTVSGLVTLVAAVHYFYMRDVWI----------ET-------GATPLVYRYIDW--------LITVPLLMVEFYLILRA---I-TNVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--L-GEAGQVASE--Q-APESV-Q-S-A-F-V-TM-RWIVTI---------------------GW---AIYPIGYFMGYFT----------GAGPEASANALNIIYNLADVVNKIAFGVIIWNVAVTE-SDKASSNCV-------IERGGLRATSPLSPEIRYI------ [III-Alpha4-c]_JX863238 [III-Alpha4-c] MALINA_OTU04_375_L_env_samples_JX863238 gi|425477426|gb|JX863238| Uncultured bacterium clone MALINA OTU04 375 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU04 375 L putative proteorhodopsin mRNA, partial cds JX863238 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 02Aug2009 3m_depth Arctic Ocean marine 69.61 -138.23 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGATCACAGTGCCACTGCTGATGGTAGAGTTCTATCTCATCCTACGTGCGATCACCAATGTCTCTGGTGGCGTGTTCTGGCGTTTGATGATCGGTACGATGGTCATGTTGGCCGCAGGTTACATGGGCGAGGCCGGGTATATCAATGCGATGCTTGGTTTCATCATCGGAATGGCTGGTTGGGCTTACATCCTGTATGAAATCTTCTTGGGTGAAGCTGGTCAAGTGGCCTCCGAGCAGGCTCCGGAATCAGTTCAGTCTGCTTTTGTGACCATGCGTTGGATTGTGACTACT WLITVPLLMVEFYLILRAITNVSGGVFWRLMIGTMVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFLGEAGQVASEQAPESVQSAFVTMRWIVTT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATCACAGTGCCACTGCTGATGGTAGAGTTCTATCTCATCCTACGTGCG---------ATC---ACCAATGTCTCTGGT---GGCGTG------------------------------------TTCTGGCGT---TTGATGATCGGTACGATGGTCATGTTGGCCGCAGGTTACATGGGCGAG---------GCC------------------GGG------TAT---------------------------------ATC------------------------------------------------------------------AATGCG------------------ATGCTTGGT---TTCATCATCGGAATGGCTGGTTGGGCTTACATCCTGTATGAAATC---------------TTC------TTG---GGTGAAGCTGGTCAAGTGGCCTCCGAG------CAG---GCTCCGGAATCAGTT---CAG---TCT---GCT---TTT---GTG---ACCATG---CGTTGGATTGTGACTACT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYLILRA---I-TNVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--L-GEAGQVASE--Q-APESV-Q-S-A-F-V-TM-RWIVTT-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_JX863145 [III-Alpha4-c] MALINA_OTU04_444_L_env_samples_JX863145 gi|425477240|gb|JX863145| Uncultured bacterium clone MALINA OTU04 444 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU04 444 L putative proteorhodopsin gene, partial cds JX863145 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 13Aug2009 0m_depth Arctic Ocean marine 69.25 -137.2 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGATCACAGTGCCACTGCTGATGGTAGAGTTCTATCTCATCCTACGTGCGATCACCAATGTCTCTGGTGGCGTGTTCTGGCGTTTGATGATCGGTACGATGGTCATGTTGGCCGCAGGTTACATGGGCGAGGCCGGGTATATCAATGCGATGCTTGGTTTCATCATCGGAATGGCTGGTTGGGCTTACATCCTGTATGAAATCTTCTTGGGTGAAGCTGGTCAAGTGGCCTCCGAGCAGGCTCCGGAGTCAGTTCGGTCTGCTTTTGTGACCATGCGTTGGATTGTGACTATT WLITVPLLMVEFYLILRAITNVSGGVFWRLMIGTMVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFLGEAGQVASEQAPESVRSAFVTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATCACAGTGCCACTGCTGATGGTAGAGTTCTATCTCATCCTACGTGCG---------ATC---ACCAATGTCTCTGGT---GGCGTG------------------------------------TTCTGGCGT---TTGATGATCGGTACGATGGTCATGTTGGCCGCAGGTTACATGGGCGAG---------GCC------------------GGG------TAT---------------------------------ATC------------------------------------------------------------------AATGCG------------------ATGCTTGGT---TTCATCATCGGAATGGCTGGTTGGGCTTACATCCTGTATGAAATC---------------TTC------TTG---GGTGAAGCTGGTCAAGTGGCCTCCGAG------CAG---GCTCCGGAGTCAGTT---CGG---TCT---GCT---TTT---GTG---ACCATG---CGTTGGATTGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYLILRA---I-TNVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--L-GEAGQVASE--Q-APESV-R-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ926118 [III-Alpha4-c] BOUM_OTU031_env_samples gb|KJ926118| Uncultured bacterium clone BOUM OTU031 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU031 putative proteorhodopsin gene, partial cds KJ926118 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 34.046 24.49733 #na #na #na #na #na GTAGACTGGTTGATCACAGTGCCGCTGTTGATGGTAGAATTCTATCTGATCTTGCGTGCGATCACCACGGTCTCTGGTGGCGTTTTCTGGCGCTTGATGATCGGTACGATGGTCATGTTGGCCGCAGGTTACATGGGCGAGGCAGGGTACATCAACGCAATGCTTGGCTTTATCATCGGGATGGCTGGTTGGGCCTATATTCTGTATGAAATCTTCATGGGTGAAGCGGGTCAAGTTGCTTCCGAACAGGCACCTGAATCTGTACAGTCAGCCTTTGTGACAATGCGTTGGATTGTGACCATTGGGTGGGCTATTTAC VDWLITVPLLMVEFYLILRAITTVSGGVFWRLMIGTMVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFMGEAGQVASEQAPESVQSAFVTMRWIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGACTGG------------------------TTGATCACAGTGCCGCTGTTGATGGTAGAATTCTATCTGATCTTGCGTGCG---------ATC---ACCACGGTCTCTGGT---GGCGTT------------------------------------TTCTGGCGC---TTGATGATCGGTACGATGGTCATGTTGGCCGCAGGTTACATGGGCGAG---------GCA------------------GGG------TAC---------------------------------ATC------------------------------------------------------------------AACGCA------------------ATGCTTGGC---TTTATCATCGGGATGGCTGGTTGGGCCTATATTCTGTATGAAATC---------------TTC------ATG---GGTGAAGCGGGTCAAGTTGCTTCCGAA------CAG---GCACCTGAATCTGTA---CAG---TCA---GCC---TTT---GTG---ACAATG---CGTTGGATTGTGACCATT---------------------------------------------------------------GGGTGG---------GCTATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPLLMVEFYLILRA---I-TTVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--M-GEAGQVASE--Q-APESV-Q-S-A-F-V-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Alpha4-c]_EU915900 [III-Alpha4-c] US120202_env_samples_EU915900 gi|229358682|gb|EU915900| Uncultured microorganism clone US120202 putative proteorhodopsin gene, partial cds Uncultured microorganism clone US120202 putative proteorhodopsin gene, partial cds EU915900 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_surface_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGCCTTCTTCTTTATGGAGACCCAGCGCGTGGAAGGAAAATGGAAGACGTCGCTGACCGTCTCCGGCCTTGTGACCCTAGTTGCAGCTGTGCATTACTTCTACATGCGCGATGTTTGGATTGAAACTGGGGCGACACCCCTCGTTTATCGCTATATCGACTGGTTGATCACAGTGCCGCTGTTGATGGTAGAATTCTATCTTATCTTGCGCGCGATCACCAACGTCTCTGGTGGCGTTTTCTGGCGCTTGATGATCGGTACAATGGTCATGCTGGCCGCAGGTTACATGGGCGAGGCAGGGTACATCAATGCAATGCTCGGCTTTATCATTGGGATGGCTGGTTGGGCCTATATTCTATATGAAATCTTCATGGGTGAAGCGGGTCAAGTTGCGTCAGAGCAGGCACCTGAGTCTGTACAGTCAGCCTTTGTGACCATGCGTTGGATTGTGACCATTGGGTGGGCTATCTAC MVAATAFFFMETQRVEGKWKTSLTVSGLVTLVAAVHYFYMRDVWIETGATPLVYRYIDWLITVPLLMVEFYLILRAITNVSGGVFWRLMIGTMVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFMGEAGQVASEQAPESVQSAFVTMRWIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCCTTCTTCTTTATGGAGACCCAGCGCGTGGAAGGA---AAATGGAAGACGTCGCTGACCGTCTCCGGCCTTGTGACCCTAGTTGCAGCTGTGCATTACTTCTACATGCGCGATGTTTGGATT------------------------------GAAACT---------------------GGGGCGACACCCCTCGTTTATCGCTATATCGACTGG------------------------TTGATCACAGTGCCGCTGTTGATGGTAGAATTCTATCTTATCTTGCGCGCG---------ATC---ACCAACGTCTCTGGT---GGCGTT------------------------------------TTCTGGCGC---TTGATGATCGGTACAATGGTCATGCTGGCCGCAGGTTACATGGGCGAG---------GCA------------------GGG------TAC---------------------------------ATC------------------------------------------------------------------AATGCA------------------ATGCTCGGC---TTTATCATTGGGATGGCTGGTTGGGCCTATATTCTATATGAAATC---------------TTC------ATG---GGTGAAGCGGGTCAAGTTGCGTCAGAG------CAG---GCACCTGAGTCTGTA---CAG---TCA---GCC---TTT---GTG---ACCATG---CGTTGGATTGTGACCATT---------------------------------------------------------------GGGTGG---------GCTATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMETQRVEG-KWKTSLTVSGLVTLVAAVHYFYMRDVWI----------ET-------GATPLVYRYIDW--------LITVPLLMVEFYLILRA---I-TNVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--M-GEAGQVASE--Q-APESV-Q-S-A-F-V-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ926127 [III-Alpha4-c] BOUM_OTU040_env_samples gb|KJ926127| Uncultured bacterium clone BOUM OTU040 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU040 putative proteorhodopsin gene, partial cds KJ926127 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 39.0995 5.3403333 #na #na #na #na #na ATAGACTGGTTGATCACTGTTCCATTGCAAATGGTTGAATTCTACCTAGTGCTTGCTGCCATCACGGTAGTATCAGGCGGGATATTCTGGCGTTTGTTGATCGGGTCATTTGTCATGTTGATCGCAGGCTATTGTGGCGAAGCTGGATACGTCAATCCTATGCTTGGCTTTATCATCGGGATGGCCGGTTGGGCCTATATTCTGTATGAAATCTTCATGGGTGAAGCAAGTCAAGTCGCCGCAGAACAGGGAAGCGATGGAGTCCAATCAGCGTATTCAACGATGCGTTGGATTGTGAGTATTGGTTGGGCTATCTAT IDWLITVPLQMVEFYLVLAAITVVSGGIFWRLLIGSFVMLIAGYCGEAGYVNPMLGFIIGMAGWAYILYEIFMGEASQVAAEQGSDGVQSAYSTMRWIVSIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAGACTGG------------------------TTGATCACTGTTCCATTGCAAATGGTTGAATTCTACCTAGTGCTTGCTGCC---------ATC---ACGGTAGTATCAGGC---GGGATA------------------------------------TTCTGGCGT---TTGTTGATCGGGTCATTTGTCATGTTGATCGCAGGCTATTGTGGCGAA---------GCT------------------GGA------TAC---------------------------------GTC------------------------------------------------------------------AATCCT------------------ATGCTTGGC---TTTATCATCGGGATGGCCGGTTGGGCCTATATTCTGTATGAAATC---------------TTC------ATG---GGTGAAGCAAGTCAAGTCGCCGCAGAA------CAG---GGAAGCGATGGAGTC---CAA---TCA---GCG---TAT---TCA---ACGATG---CGTTGGATTGTGAGTATT---------------------------------------------------------------GGTTGG---------GCTATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDW--------LITVPLQMVEFYLVLAA---I-TVVSG-GI------------FWR-LLIGSFVMLIAGYCGE---A------G--Y-----------V----------------------NP------MLG-FIIGMAGWAYILYEI-----F--M-GEASQVAAE--Q-GSDGV-Q-S-A-Y-S-TM-RWIVSI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_JX863229 [III-Alpha4-ARCTIC42C05] MALINA_OTU03b_187_L_env_samples_JX863229 gi|425477408|gb|JX863229| Uncultured bacterium clone MALINA OTU03b 187 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU03b 187 L putative proteorhodopsin mRNA, partial cds JX863229 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 08Aug2009 3m_depth Arctic Ocean marine 70.8 -133.73 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTCATCACAGTGCCACTTTTGATGGTTGAATTCTACCTCATCCTTCGTGCGATCACTGCTGTGTCAGGTGGCGTATTTTGGCGCCTTATGATTGGCACCCTGGTAATGTTGGCAGCAGGTTACATGGGCGAAGCTGGCTACATCAGCGCTTGGCTCGGGTTCATTGTTGGTATCGTAGGTTGGGCATACATTTTGTACGAAATCTTCTTTGGCGAAGCAGGCAAGGTTGCAGCAGAAAAAGCTCCAGCATCTGTTCAATCTGCATTCTCAGCAATGCGTTGGATTGTTACAATT WLITVPLLMVEFYLILRAITAVSGGVFWRLMIGTLVMLAAGYMGEAGYISAWLGFIVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSAMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTCATCACAGTGCCACTTTTGATGGTTGAATTCTACCTCATCCTTCGTGCG---------ATC---ACTGCTGTGTCAGGT---GGCGTA------------------------------------TTTTGGCGC---CTTATGATTGGCACCCTGGTAATGTTGGCAGCAGGTTACATGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGCGCT------------------TGGCTCGGG---TTCATTGTTGGTATCGTAGGTTGGGCATACATTTTGTACGAAATC---------------TTC------TTT---GGCGAAGCAGGCAAGGTTGCAGCAGAA------AAA---GCTCCAGCATCTGTT---CAA---TCT---GCA---TTC---TCA---GCAATG---CGTTGGATTGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTLVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-AM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_EF088613 [III-Alpha4-ARCTIC42C05] E400058_env_samples_EF088613 gi|126843467|gb|EF088613| Uncultured bacterium clone E400058 putative proteorhodopsin gene, partial cds Uncultured bacterium clone E400058 putative proteorhodopsin gene, partial cds EF088613 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na Bering_Sea_surface_water_sample Arctic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGCTTGCCGCTACTGCTTTCTTCTTTATGGAAACCCAACGGGTTGAAGGTAAGTGGAAAACTTCGCTGACAGTTTCTGGCCTTGTTACCTTAGTAGCAGCTGTTCACTATTTTTATATGCGCGATGTTTGGATTGAAACTGGCGCTACGCCATTAGTATATCGCTACATCGATTGGCTCATCACAGTGCCACTTTTGATGGTTGAATTCTACCTCATCCTTCGTGCGATCACTGCTGTGTCAGGTGGCGTATTTTGGCGCCTTATGATTGGCACCCTGGTAATGTTGGCAGCAGGTTACATGGGCGAAGCTGGCTACATCAGCGCTTGGCTCGGGTTCATTGTTGGCATCGTAGGTTGGGCATACATTTTGTATGAAATCTTCTTTGGCGAAGCAGGCAAGGTTGCAGCAGAAAAAGCTCCAGCATCTGTTCAATCTGCATTCTCAACAATGCGTTGGATTGTTACAATTGGTTGGGCAATTTACCCA MLAATAFFFMETQRVEGKWKTSLTVSGLVTLVAAVHYFYMRDVWIETGATPLVYRYIDWLITVPLLMVEFYLILRAITAVSGGVFWRLMIGTLVMLAAGYMGEAGYISAWLGFIVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACTGCTTTCTTCTTTATGGAAACCCAACGGGTTGAAGGT---AAGTGGAAAACTTCGCTGACAGTTTCTGGCCTTGTTACCTTAGTAGCAGCTGTTCACTATTTTTATATGCGCGATGTTTGGATT------------------------------GAAACT---------------------GGCGCTACGCCATTAGTATATCGCTACATCGATTGG------------------------CTCATCACAGTGCCACTTTTGATGGTTGAATTCTACCTCATCCTTCGTGCG---------ATC---ACTGCTGTGTCAGGT---GGCGTA------------------------------------TTTTGGCGC---CTTATGATTGGCACCCTGGTAATGTTGGCAGCAGGTTACATGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGCGCT------------------TGGCTCGGG---TTCATTGTTGGCATCGTAGGTTGGGCATACATTTTGTATGAAATC---------------TTC------TTT---GGCGAAGCAGGCAAGGTTGCAGCAGAA------AAA---GCTCCAGCATCTGTT---CAA---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATT---------------------------------------------------------------GGTTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFMETQRVEG-KWKTSLTVSGLVTLVAAVHYFYMRDVWI----------ET-------GATPLVYRYIDW--------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTLVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_EF088614 [III-Alpha4-ARCTIC42C05] E400061_env_samples_EF088614 gi|126843469|gb|EF088614| Uncultured bacterium clone E400061 putative proteorhodopsin gene, partial cds Uncultured bacterium clone E400061 putative proteorhodopsin gene, partial cds EF088614 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na Bering_Sea_surface_water_sample Arctic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGCTTGCCGCTACTGCTTTCTTCTTTATGGAAACCCAACGGGTTGAAGGTAAGTGGAAAACTTCGCTGACAGTTTCTGGCCTTGTTACCTTAGTAGCAGCTGTTCACTATTTTTATATGCGCGATGTTTGGATTGAAACTGGCGCTACGCCATTAGTATATCGCTACATCGATTGGCTCATCACAGTGCCACTTTTGATGGTTGAATTCTACCTCATCCTTCGTGCGATCACTGCTGTGTCAGGTGGCGTATTTTGGCGCCTTATGATTGGCACCCTGGTAATGTTGGCAGCAGGTTACATGGGCGAAGCTGGCTACATCAGCGCTTGGCTCGGGTTCATTGTTGGCATCGTAGGTTGGGCATACATTTTGTATGAAATCTTCTTTGGCGAAGCAGGCAAGGTTGCAGCAGAAAAAGCTCCAGCATCTGTTCAATCTGCATTCTCAACAATGCGTTGGATTGTTACAATTGGTTGGGCAATTTACCCA MLAATAFFFMETQRVEGKWKTSLTVSGLVTLVAAVHYFYMRDVWIETGATPLVYRYIDWLITVPLLMVEFYLILRAITAVSGGVFWRLMIGTLVMLAAGYMGEAGYISAWLGFIVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACTGCTTTCTTCTTTATGGAAACCCAACGGGTTGAAGGT---AAGTGGAAAACTTCGCTGACAGTTTCTGGCCTTGTTACCTTAGTAGCAGCTGTTCACTATTTTTATATGCGCGATGTTTGGATT------------------------------GAAACT---------------------GGCGCTACGCCATTAGTATATCGCTACATCGATTGG------------------------CTCATCACAGTGCCACTTTTGATGGTTGAATTCTACCTCATCCTTCGTGCG---------ATC---ACTGCTGTGTCAGGT---GGCGTA------------------------------------TTTTGGCGC---CTTATGATTGGCACCCTGGTAATGTTGGCAGCAGGTTACATGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGCGCT------------------TGGCTCGGG---TTCATTGTTGGCATCGTAGGTTGGGCATACATTTTGTATGAAATC---------------TTC------TTT---GGCGAAGCAGGCAAGGTTGCAGCAGAA------AAA---GCTCCAGCATCTGTT---CAA---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATT---------------------------------------------------------------GGTTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFMETQRVEG-KWKTSLTVSGLVTLVAAVHYFYMRDVWI----------ET-------GATPLVYRYIDW--------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTLVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_JX863227 [III-Alpha4-ARCTIC42C05] MALINA_OTU03b_094_L_env_samples_JX863227 gi|425477404|gb|JX863227| Uncultured bacterium clone MALINA OTU03b 094 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU03b 094 L putative proteorhodopsin mRNA, partial cds JX863227 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 09Aug2009 3m_depth Arctic Ocean marine 71.57 -133.94 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTCATCACAGTGCCGCTTTTGATGGTTGAATTTTACCTCATCCTTCGTGCAATCACTGCTGTTTCAGGTGGTGTATTTTGGCGCCTTATGATCGGCACCATGGTAATGTTGGCGGCAGGTTACATGGGCGAAGCTGGCTACATCAGTGCTTGGCTTGGCTTCATAGTTGGCATAGTGGGTTGGGCATACATTTTGTATGAAATCTTCTTTGGCGAAGCAGGCAAGGTTGCGGCAGAGAAAGCTCCAGCATCGGTACAATCTGCATTCTCAACAATGCGTTGGATCGTTACAATT WLITVPLLMVEFYLILRAITAVSGGVFWRLMIGTMVMLAAGYMGEAGYISAWLGFIVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTCATCACAGTGCCGCTTTTGATGGTTGAATTTTACCTCATCCTTCGTGCA---------ATC---ACTGCTGTTTCAGGT---GGTGTA------------------------------------TTTTGGCGC---CTTATGATCGGCACCATGGTAATGTTGGCGGCAGGTTACATGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGTGCT------------------TGGCTTGGC---TTCATAGTTGGCATAGTGGGTTGGGCATACATTTTGTATGAAATC---------------TTC------TTT---GGCGAAGCAGGCAAGGTTGCGGCAGAG------AAA---GCTCCAGCATCGGTA---CAA---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATCGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_JX863125 [III-Alpha4-ARCTIC42C05] MALINA_OTU03b_105_L_env_samples_JX863125 gi|425477200|gb|JX863125| Uncultured bacterium clone MALINA OTU03b 105 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU03b 105 L putative proteorhodopsin gene, partial cds JX863125 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 08Aug2009 3m_depth Arctic Ocean marine 70.8 -133.73 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTCATCACAGTGCCGCTTTTGATGGTTGAATTTTACCTCATCCTTCGTGCAATCACTGCTGTTTCAGGTGGTGTATTTTGGCGCCTTATGATCGGCACCATGGTAATGTTGGCGGCAGGTTACATGGGCGAAGCTGGCTACATCAATGCTTGGCTTGGCTTCATAGTTGGCATACTGGGTTGGGCATACATTTTGTATGAAATCTTCTTTGGCGAAGCAGGCAAGGTTGCCGCAGAGAAAGCTCCAGCATCGGTACAATCTGCATTCTCAACAATGCGTTGGATCGTTACAATT WLITVPLLMVEFYLILRAITAVSGGVFWRLMIGTMVMLAAGYMGEAGYINAWLGFIVGILGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTCATCACAGTGCCGCTTTTGATGGTTGAATTTTACCTCATCCTTCGTGCA---------ATC---ACTGCTGTTTCAGGT---GGTGTA------------------------------------TTTTGGCGC---CTTATGATCGGCACCATGGTAATGTTGGCGGCAGGTTACATGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------TGGCTTGGC---TTCATAGTTGGCATACTGGGTTGGGCATACATTTTGTATGAAATC---------------TTC------TTT---GGCGAAGCAGGCAAGGTTGCCGCAGAG------AAA---GCTCCAGCATCGGTA---CAA---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATCGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------NA------WLG-FIVGILGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_EU795235 [III-Alpha4-ARCTIC42C05] ARCTIC37_F_2_genomic_EU795235 gi|193084449|gb|EU795235| Uncultured bacterium ARCTIC37 F 02 genomic sequence Uncultured bacterium ARCTIC37 F 02 genomic sequence EU795235 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:542427 genomic_DNA other 02-juil-08 #na Arctic Arctic Ocean marine 71.4 -156.8 Direct Submission Henn,M.R., Young,S., Jaffe,D.B., Gnerre,S., Berlin,A., Heiman,D., Hepburn,T., Sykes,S., Kirchman,D.L., Cottrell,M.T., Lander,E., Nusbaum,C. and Birren,B. Submitted (21MAY2008) Broad Institute of MIT and Harvard, 320 Charles Street, Cambridge, MA 02141, USA #na #na ATGGGATATATCTACGGTCGAATTAAACTAATGGTGGCTACGGCTGCATTAGTGGCTGCGCCAACACTGGCTTCAGCAAGTGCAAATTTGGAGTCAGATGATTTTGTAGGCATTTCATTTTGGCTAATTTCGATGGCCTTAGTTGCGGCTACAGCATTCTTCTTCATGGAAACCCAACGGGTTGAAGGTAAGTGGAAAACTTCGCTGACAGTTTCTGGCCTTGTTACTTTAGTGGCAGCGGTTCACTATTTTTATATGCGTGATGTGTGGGTTGAAACTGGCGCTACCCCATTAGTCTATCGTTACATCGACTGGCTCATCACAGTGCCGCTTCTAATGGTTGAATTCTACCTCATCCTTCGTGCGATTACAGCGGTTTCAGGTGGTGTATTTTGGCGCCTTATGATCGGTAGCATAGTTATGCTGGCGGCTGGTTACTTGGGCGAAGCTGGCTACATCAGCGCTTGGCTTGGGTTCATCGTCGGCATAGTGGGTTGGGCATACATCTTGTATGAAATCTTCTTTGGAGAAGCGGGCAAAGTTGCTGCTGAAAAAGCTCCAGCGTCAGTGCAATCTGCATTCTCAACAATGCGTTGGATTGTTACAATTGGCTGGGCAATCTATCCAATTGGTTATTTCATGGGTTATTTTTCAGGAGCCGGCCCAGAGGCATCTTCCGAAATGCTTAACATTATCTATAACCTCGCAGATGTTATTAATAAAATTGCATTTGGTGTGATCATCTGGAACGTTGCCGTTACAGAGACTGACAATGCTAAAGGTAAAGCTAAAGCT MGYIYGRIKLMVATAALVAAPTLASASANLESDDFVGISFWLISMALVAATAFFFMETQRVEGKWKTSLTVSGLVTLVAAVHYFYMRDVWVETGATPLVYRYIDWLITVPLLMVEFYLILRAITAVSGGVFWRLMIGSIVMLAAGYLGEAGYISAWLGFIVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTIGWAIYPIGYFMGYFSGAGPEASSEMLNIIYNLADVINKIAFGVIIWNVAVTETDNAKGKAKA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGATATATCTACGGTCGAATTAAACTAATGGTGGCTACGGCTGCATTAGTGGCTGCGCCAACACTGGCTTCAGCAAGTGCAAATTTGGAGTCAGATGATTTTGTAGGCATTTCATTTTGGCTAATTTCGATGGCCTTAGTTGCGGCTACAGCATTCTTCTTCATGGAAACCCAACGGGTTGAAGGT---AAGTGGAAAACTTCGCTGACAGTTTCTGGCCTTGTTACTTTAGTGGCAGCGGTTCACTATTTTTATATGCGTGATGTGTGGGTT------------------------------GAAACT---------------------GGCGCTACCCCATTAGTCTATCGTTACATCGACTGG------------------------CTCATCACAGTGCCGCTTCTAATGGTTGAATTCTACCTCATCCTTCGTGCG---------ATT---ACAGCGGTTTCAGGT---GGTGTA------------------------------------TTTTGGCGC---CTTATGATCGGTAGCATAGTTATGCTGGCGGCTGGTTACTTGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGCGCT------------------TGGCTTGGG---TTCATCGTCGGCATAGTGGGTTGGGCATACATCTTGTATGAAATC---------------TTC------TTT---GGAGAAGCGGGCAAAGTTGCTGCTGAA------AAA---GCTCCAGCGTCAGTG---CAA---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATT---------------------------------------------------------------GGCTGG---------GCAATCTATCCAATTGGTTATTTCATGGGTTATTTTTCA------------------------------GGAGCCGGCCCAGAGGCATCTTCCGAAATGCTTAACATTATCTATAACCTCGCAGATGTTATTAATAAAATTGCATTTGGTGTGATCATCTGGAACGTTGCCGTTACAGAG---ACTGACAATGCTAAAGGTAAAGCTAAA---------------------GCT------------------------------------------------------------------------ ------------------------------------------------------------------------------------------MGYIYGRIKLMVATAALVAAPTLASASANLESDDFVGISFWLISMALVAATAFFFMETQRVEG-KWKTSLTVSGLVTLVAAVHYFYMRDVWV----------ET-------GATPLVYRYIDW--------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGSIVMLAAGYLGE---A------G--Y-----------I----------------------SA------WLG-FIVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYPIGYFMGYFS----------GAGPEASSEMLNIIYNLADVINKIAFGVIIWNVAVTE-TDNAKGKAK-------A------------------------ [III-Alpha4-ARCTIC42C05]_FJ618973 [III-Alpha4-ARCTIC42C05] PR_707_07_08_env_samples_FJ618973 gi|223046829|gb|FJ618973| Uncultured bacterium clone PR 707 07 08 proteorhodopsin gene, partial cds Uncultured bacterium clone PR 707 07 08 proteorhodopsin gene, partial cds FJ618973 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-juil-09 #na Arctic_Ocean Arctic Ocean marine 71.37 -156.68 Photoheterotrophic microbes in the Arctic Ocean in summer and winter Cottrell,M.T. and Kirchman,D.L. Appl. Environ. Microbiol. 75 (15), 49584966 (2009) 19502441 #na TATATTGACTGGCTCATCACAGTGCCGCTTCTAATGGTTGAATTCTACCTCATCCTTCGTGCGATTACAGCCGTTTCAGGTGGTGTATTTTGGCGCCTTATGATCGGTAGCATAGTAATGCTGGCGGCTGGTTACTTGGGCGAAGCTGGCTACATCAGCGCTTGGCTTGGATTCATCGTCGGCATAGTGGGTTGGGCATACATCTTGTATGAAATCTTCTTTGGAGAAGCGGGCAAAGTTGCTGCTGAAAAAGCTCCAGCGTCAGTGCAATCTGCATTCTCAACAATGCGTTGGATTGTTACAATTGGATGGGCCATATAC YIDWLITVPLLMVEFYLILRAITAVSGGVFWRLMIGSIVMLAAGYLGEAGYISAWLGFIVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTIGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATTGACTGG------------------------CTCATCACAGTGCCGCTTCTAATGGTTGAATTCTACCTCATCCTTCGTGCG---------ATT---ACAGCCGTTTCAGGT---GGTGTA------------------------------------TTTTGGCGC---CTTATGATCGGTAGCATAGTAATGCTGGCGGCTGGTTACTTGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGCGCT------------------TGGCTTGGA---TTCATCGTCGGCATAGTGGGTTGGGCATACATCTTGTATGAAATC---------------TTC------TTT---GGAGAAGCGGGCAAAGTTGCTGCTGAA------AAA---GCTCCAGCGTCAGTG---CAA---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATT---------------------------------------------------------------GGATGG---------GCCATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YIDW--------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGSIVMLAAGYLGE---A------G--Y-----------I----------------------SA------WLG-FIVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_JX863124 [III-Alpha4-ARCTIC42C05] MALINA_OTU03b_032_L_env_samples_JX863124 gi|425477198|gb|JX863124| Uncultured bacterium clone MALINA OTU03b 032 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU03b 032 L putative proteorhodopsin gene, partial cds JX863124 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 07Aug2009 5m_depth Arctic Ocean marine 70.91 -128.92 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGATCACAGTGCCGCTTTTGATGGTTGAGTTCTACCTCATCCTTCGTGCGATTACTGCTGTTTCAGGCGGCGTATTTTGGCGCCTTATGATCGGTACCTTGGTTATGCTCGCTGCCGGCTACATGGGCGAAGCTGGCTACATCAGCGCTTGGCTCGGCTTTATCGTCGGCATAGTCGGCTGGGCATACATCTTGTATGAAATCTTCTTTGGTGAAGCCGGTAAGGTTGCTGCAGAGAAAGCTCCTCCATCGGTGCAATCGGCCTTCGTAACAATGCGTTGGATCGTGACCATC WLITVPLLMVEFYLILRAITAVSGGVFWRLMIGTLVMLAAGYMGEAGYISAWLGFIVGIVGWAYILYEIFFGEAGKVAAEKAPPSVQSAFVTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATCACAGTGCCGCTTTTGATGGTTGAGTTCTACCTCATCCTTCGTGCG---------ATT---ACTGCTGTTTCAGGC---GGCGTA------------------------------------TTTTGGCGC---CTTATGATCGGTACCTTGGTTATGCTCGCTGCCGGCTACATGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGCGCT------------------TGGCTCGGC---TTTATCGTCGGCATAGTCGGCTGGGCATACATCTTGTATGAAATC---------------TTC------TTT---GGTGAAGCCGGTAAGGTTGCTGCAGAG------AAA---GCTCCTCCATCGGTG---CAA---TCG---GCC---TTC---GTA---ACAATG---CGTTGGATCGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTLVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APPSV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_EU795243 [III-Alpha4-ARCTIC42C05] ARCTIC22_G_2_genomic_EU795243 gi|193084457|gb|EU795243| Uncultured bacterium ARCTIC22 G 02 genomic sequence Uncultured bacterium ARCTIC22 G 02 genomic sequence EU795243 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:542409 genomic_DNA other 02-juil-08 #na Arctic Arctic Ocean marine 71.4 -156.8 Direct Submission Henn,M.R., Young,S., Jaffe,D.B., Gnerre,S., Berlin,A., Heiman,D., Hepburn,T., Sykes,S., Kirchman,D.L., Cottrell,M.T., Lander,E., Nusbaum,C. and Birren,B. Submitted (21MAY2008) Broad Institute of MIT and Harvard, 320 Charles Street, Cambridge, MA 02141, USA #na #na TTGCGGCGCCATCTCTGGCGTCTGTTAAGTGCTAATCTAGAATCCGATGATTTTGTCGGTATTTCATTTTGGCTAATTTCGATGGCTTTGGTTGCGGCTACAGCATTCTTCTTCATGGAAACCCAGCGGGTTGAAGGTAAGTGGAAAACTTCGCTGACAGTTTCTGGCCTTGTTACACTAGTAGCAGCGGTTCATTACTTTTACATGCGTGATGTCTGGATCGAAACTGGTGCCACGCCTCTAGTTTACCGCTACATTGACTGGCTGATCACAGTGCCGCTTTTGATGGTTGAGTTCTACCTCATCCTTCGTGCGATTACTGCTGTTTCAGGCGGCGTATTTTGGCGCCTTATGATCGGTACCTTGGTTATGCTCGCTGCCGGCTACATGGGCGAAGCTGGCTACATCAGCGCTTGGCTCGGCTTTATCGTCGGCATAGTCGGCTGGGCATACATCTTGTATGAAATCTTCTTTGGTGAAGCCGGTAAGGTTGCTGCAGAGAAAGCTCCAGCATCAGTTCAATCTGCATTCTCAACGATGCGTTGGATTGTTACAATCGGCTGGGCTATTTACCCTCTTGGTTATTTCCTCGGTTACTTCACAGGAGCCGGCCCAGAAGAGTCGTCTGCCATGCTAAACATCGTTTATAACCTCGCAGACGTTATAAACAAAATTGCGTTTGGTGTGATCATCTGGAACGTTGCAGTTACAGAGTCTGACAAAGCTAAATCC LRRHLWRLLSANLESDDFVGISFWLISMALVAATAFFFMETQRVEGKWKTSLTVSGLVTLVAAVHYFYMRDVWIETGATPLVYRYIDWLITVPLLMVEFYLILRAITAVSGGVFWRLMIGTLVMLAAGYMGEAGYISAWLGFIVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTIGWAIYPLGYFLGYFTGAGPEESSAMLNIVYNLADVINKIAFGVIIWNVAVTESDKAKS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCGGCGCCATCTCTGGCGTCTGTTAAGTGCTAATCTAGAATCCGATGATTTTGTCGGTATTTCATTTTGGCTAATTTCGATGGCTTTGGTTGCGGCTACAGCATTCTTCTTCATGGAAACCCAGCGGGTTGAAGGT---AAGTGGAAAACTTCGCTGACAGTTTCTGGCCTTGTTACACTAGTAGCAGCGGTTCATTACTTTTACATGCGTGATGTCTGGATC------------------------------GAAACT---------------------GGTGCCACGCCTCTAGTTTACCGCTACATTGACTGG------------------------CTGATCACAGTGCCGCTTTTGATGGTTGAGTTCTACCTCATCCTTCGTGCG---------ATT---ACTGCTGTTTCAGGC---GGCGTA------------------------------------TTTTGGCGC---CTTATGATCGGTACCTTGGTTATGCTCGCTGCCGGCTACATGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGCGCT------------------TGGCTCGGC---TTTATCGTCGGCATAGTCGGCTGGGCATACATCTTGTATGAAATC---------------TTC------TTT---GGTGAAGCCGGTAAGGTTGCTGCAGAG------AAA---GCTCCAGCATCAGTT---CAA---TCT---GCA---TTC---TCA---ACGATG---CGTTGGATTGTTACAATC---------------------------------------------------------------GGCTGG---------GCTATTTACCCTCTTGGTTATTTCCTCGGTTACTTCACA------------------------------GGAGCCGGCCCAGAAGAGTCGTCTGCCATGCTAAACATCGTTTATAACCTCGCAGACGTTATAAACAAAATTGCGTTTGGTGTGATCATCTGGAACGTTGCAGTTACAGAG---TCTGACAAAGCTAAATCC--------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------LRRHLWRLLSANLESDDFVGISFWLISMALVAATAFFFMETQRVEG-KWKTSLTVSGLVTLVAAVHYFYMRDVWI----------ET-------GATPLVYRYIDW--------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTLVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYPLGYFLGYFT----------GAGPEESSAMLNIVYNLADVINKIAFGVIIWNVAVTE-SDKAKS----------------------------------- [III-Alpha4-ARCTIC42C05]_JX863228 [III-Alpha4-ARCTIC42C05] MALINA_OTU03b_184_L_env_samples_JX863228 gi|425477406|gb|JX863228| Uncultured bacterium clone MALINA OTU03b 184 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU03b 184 L putative proteorhodopsin mRNA, partial cds JX863228 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 08Aug2009 3m_depth Arctic Ocean marine 70.8 -133.73 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGATCACAGTGCCGCTTTTAATGGTTGAGTTCTACCTCATCCTTCGTGCGATTACTGCTGTTTTAGGCGGCGTATTCTGGCGCCTTATGATCGGTACCTTGGTTATGCTCGCTGCCGGCTACATGGGCGAAGCTGGCTACATCAGCGCTTGGCTTGGCTTTATCGTCGGCATAGTCGGCTGGGCATACATCTTGTATGAAATCTTCTTTGGTGAAGCCGGTAAGGTTGCTGCAGAGAAAGCTCCAGCATCAATTCAATCTGCATTCTCAACGATGCGTTGGATTGTTACAATC WLITVPLLMVEFYLILRAITAVLGGVFWRLMIGTLVMLAAGYMGEAGYISAWLGFIVGIVGWAYILYEIFFGEAGKVAAEKAPASIQSAFSTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATCACAGTGCCGCTTTTAATGGTTGAGTTCTACCTCATCCTTCGTGCG---------ATT---ACTGCTGTTTTAGGC---GGCGTA------------------------------------TTCTGGCGC---CTTATGATCGGTACCTTGGTTATGCTCGCTGCCGGCTACATGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGCGCT------------------TGGCTTGGC---TTTATCGTCGGCATAGTCGGCTGGGCATACATCTTGTATGAAATC---------------TTC------TTT---GGTGAAGCCGGTAAGGTTGCTGCAGAG------AAA---GCTCCAGCATCAATT---CAA---TCT---GCA---TTC---TCA---ACGATG---CGTTGGATTGTTACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYLILRA---I-TAVLG-GV------------FWR-LMIGTLVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASI-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_JX863231 [III-Alpha4-ARCTIC42C05] MALINA_OTU03b_199_L_env_samples_JX863231 gi|425477412|gb|JX863231| Uncultured bacterium clone MALINA OTU03b 199 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU03b 199 L putative proteorhodopsin mRNA, partial cds JX863231 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 08Aug2009 3m_depth Arctic Ocean marine 70.8 -133.73 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGATCACAGTGCCGCTTTTAATGGTTGAGTTCTACCTCATCCTTCGTGCGATTACTGCTGTTTTAGGCGGCGTATTCTGGCGCCTTATGATCGGTACCTTGGTTATGCTCGCTGCCGGCTACATGGGCGAAGCTGGCTACATCAGCGCTTGGCTTGGCTTTATCGTCGGCATAGTCGGCTGGGCATACATCTTGTATGAAATCTTCTTTGGTGAAGCCGGTAAGGTTGCTGCAGAGAAAGCTCCAGCATCAGTTCAATCTGCATTCTCAACGATGCGTTGGATTGTTACAATC WLITVPLLMVEFYLILRAITAVLGGVFWRLMIGTLVMLAAGYMGEAGYISAWLGFIVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATCACAGTGCCGCTTTTAATGGTTGAGTTCTACCTCATCCTTCGTGCG---------ATT---ACTGCTGTTTTAGGC---GGCGTA------------------------------------TTCTGGCGC---CTTATGATCGGTACCTTGGTTATGCTCGCTGCCGGCTACATGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGCGCT------------------TGGCTTGGC---TTTATCGTCGGCATAGTCGGCTGGGCATACATCTTGTATGAAATC---------------TTC------TTT---GGTGAAGCCGGTAAGGTTGCTGCAGAG------AAA---GCTCCAGCATCAGTT---CAA---TCT---GCA---TTC---TCA---ACGATG---CGTTGGATTGTTACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYLILRA---I-TAVLG-GV------------FWR-LMIGTLVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_JX863226 [III-Alpha4-ARCTIC42C05] MALINA_OTU03b_163_L_env_samples_JX863226 gi|425477402|gb|JX863226| Uncultured bacterium clone MALINA OTU03b 163 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU03b 163 L putative proteorhodopsin mRNA, partial cds JX863226 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 08Aug2009 3m_depth Arctic Ocean marine 70.8 -133.73 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGATCACAGTGCCGCTTTTGATGGTTGAGTTCTACCTCATCCTTCGTGCGATTACTGCTGTTTCAGGCGGCGTATTCTGGCGCCTTATGATCGGTACCTTGGTTATGCTAGCTGCCGGCTACATGGGCGAAGCTGGCTACATCAGCGCTTGGCTCGGCTTTATCGTCGGCATAGTCGGCTGGGCATACATCTTGTATGAAATCTTCTTTGGTGAAGCTGGTAAGGTTGCTGCAGAGAAAGCTCCAGCATCAGTTCAATCTGCATTCTCAACGATGCGTTGGATTGTTACAATC WLITVPLLMVEFYLILRAITAVSGGVFWRLMIGTLVMLAAGYMGEAGYISAWLGFIVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATCACAGTGCCGCTTTTGATGGTTGAGTTCTACCTCATCCTTCGTGCG---------ATT---ACTGCTGTTTCAGGC---GGCGTA------------------------------------TTCTGGCGC---CTTATGATCGGTACCTTGGTTATGCTAGCTGCCGGCTACATGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGCGCT------------------TGGCTCGGC---TTTATCGTCGGCATAGTCGGCTGGGCATACATCTTGTATGAAATC---------------TTC------TTT---GGTGAAGCTGGTAAGGTTGCTGCAGAG------AAA---GCTCCAGCATCAGTT---CAA---TCT---GCA---TTC---TCA---ACGATG---CGTTGGATTGTTACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTLVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_JX863230 [III-Alpha4-ARCTIC42C05] MALINA_OTU03b_197_L_env_samples_JX863230 gi|425477410|gb|JX863230| Uncultured bacterium clone MALINA OTU03b 197 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU03b 197 L putative proteorhodopsin mRNA, partial cds JX863230 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 08Aug2009 3m_depth Arctic Ocean marine 70.8 -133.73 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGATCACAGTGCCGCTTTTGATGGTTGAGTTCTACCTCATCCTTCGTGCGATTACTGCTGTTTCAGGCGGCGTATTCAGGCGCCTTATGATCGGTACCTTGGTTATGCTCGCTGCCGGTTACATGGGCGAAGCTGGCTACATCAGCGCTTGGCTCGGCTTTATCGTCGGCATAGTCGGCTGGGCATACATCTTGTATGAAATCTTCTTTGGTGAAGCTGGTAAGGTTGCTGCAGAGAAAGCTCCAGCATCAGTTCAATCTGCATTCTCAACGATGCGTTGGATTGTTACAATC WLITVPLLMVEFYLILRAITAVSGGVFRRLMIGTLVMLAAGYMGEAGYISAWLGFIVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATCACAGTGCCGCTTTTGATGGTTGAGTTCTACCTCATCCTTCGTGCG---------ATT---ACTGCTGTTTCAGGC---GGCGTA------------------------------------TTCAGGCGC---CTTATGATCGGTACCTTGGTTATGCTCGCTGCCGGTTACATGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGCGCT------------------TGGCTCGGC---TTTATCGTCGGCATAGTCGGCTGGGCATACATCTTGTATGAAATC---------------TTC------TTT---GGTGAAGCTGGTAAGGTTGCTGCAGAG------AAA---GCTCCAGCATCAGTT---CAA---TCT---GCA---TTC---TCA---ACGATG---CGTTGGATTGTTACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FRR-LMIGTLVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_EF088592 [III-Alpha4-ARCTIC42C05] E400008_env_samples_EF088592 gi|126843425|gb|EF088592| Uncultured bacterium clone E400008 putative proteorhodopsin gene, partial cds Uncultured bacterium clone E400008 putative proteorhodopsin gene, partial cds EF088592 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na Bering_Sea_surface_water_sample Arctic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTTGCCGCTACTGTTTTCTTCTTCATGGAGACCCAGCGCGTTGAGGGAAAATGGAAGACTTCACTGACGGTTTCCGGTCTTGTAACCTTAGTCGCCGCTGTGCATTATTTTTATATGCGGGATGTTTGGATCGAAACTGGATCGACACCACTAGTTTATCGCTACATTGACTGGTTAATCACTGTGCCACTTTTGATGGTAGAATTTTACCTCATTTTACGTGCAATCACAAAAGTATCTGGCGGAGTATTCTGGCGTCTTATGATTGGCACCATGGTGATGCTCGCTGCGGGTTACATGGGCGAAGCAGGTTACATCAGCGCATGGCTTGGGTTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATTTTTCTTGGCGAAGCAGGTCAAGTTGCTGCCAACGAAGCTCCAGAATCTGTCAAATCAGCATTCTCAACAATGCGTTGGATTGTTACAATCGGGTGGGCGATCTACCCA MVAATVFFFMETQRVEGKWKTSLTVSGLVTLVAAVHYFYMRDVWIETGSTPLVYRYIDWLITVPLLMVEFYLILRAITKVSGGVFWRLMIGTMVMLAAGYMGEAGYISAWLGFIVGMVGWAYILYEIFLGEAGQVAANEAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTTTTCTTCTTCATGGAGACCCAGCGCGTTGAGGGA---AAATGGAAGACTTCACTGACGGTTTCCGGTCTTGTAACCTTAGTCGCCGCTGTGCATTATTTTTATATGCGGGATGTTTGGATC------------------------------GAAACT---------------------GGATCGACACCACTAGTTTATCGCTACATTGACTGG------------------------TTAATCACTGTGCCACTTTTGATGGTAGAATTTTACCTCATTTTACGTGCA---------ATC---ACAAAAGTATCTGGC---GGAGTA------------------------------------TTCTGGCGT---CTTATGATTGGCACCATGGTGATGCTCGCTGCGGGTTACATGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AGCGCA------------------TGGCTTGGG---TTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATT---------------TTT------CTT---GGCGAAGCAGGTCAAGTTGCTGCCAAC------GAA---GCTCCAGAATCTGTC---AAA---TCA---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATC---------------------------------------------------------------GGGTGG---------GCGATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMETQRVEG-KWKTSLTVSGLVTLVAAVHYFYMRDVWI----------ET-------GSTPLVYRYIDW--------LITVPLLMVEFYLILRA---I-TKVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGMVGWAYILYEI-----F--L-GEAGQVAAN--E-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_EF088596 [III-Alpha4-ARCTIC42C05] E400013_env_samples_EF088596 gi|126843433|gb|EF088596| Uncultured bacterium clone E400013 putative proteorhodopsin gene, partial cds Uncultured bacterium clone E400013 putative proteorhodopsin gene, partial cds EF088596 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na Bering_Sea_surface_water_sample Arctic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTAGCCGCTACTGTTTTCTTCTTCATGGAGACCCAGCGCGTTGAGGGAAAATGGAAGACTTCACTGACGGTTTCCGGTCTTGTAACCTTAGTCGCCGCTGTGCATTATTTTTATATGCGGGATGTTTGGATCGAAACTGGATCGACACCACTAGTTTATCGCTACATTGACTGGTTAATCACTGTGCCACTTTTGATGGTAGAATTTTACCTCATTTTACGTGCAATCACAAAAGTATCTGGCGGAGTATTCTGGCGTCTTATGATTGGCACCATGGTGATGCTCGCTGCGGGTTACATGGGCGAAGCAGGTTACATCAGCGCATGGCTTGGGTTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATTTTTCTTGGCGAAGCAGGTCAAGTTGCTGCCAACGAAGCTCCAGAATCTGTCAAATCAGCATTCTCAACAATGCGTTGGATTGTTACAATCGGCTGGGCGATCTACCCA MVAATVFFFMETQRVEGKWKTSLTVSGLVTLVAAVHYFYMRDVWIETGSTPLVYRYIDWLITVPLLMVEFYLILRAITKVSGGVFWRLMIGTMVMLAAGYMGEAGYISAWLGFIVGMVGWAYILYEIFLGEAGQVAANEAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTTTTCTTCTTCATGGAGACCCAGCGCGTTGAGGGA---AAATGGAAGACTTCACTGACGGTTTCCGGTCTTGTAACCTTAGTCGCCGCTGTGCATTATTTTTATATGCGGGATGTTTGGATC------------------------------GAAACT---------------------GGATCGACACCACTAGTTTATCGCTACATTGACTGG------------------------TTAATCACTGTGCCACTTTTGATGGTAGAATTTTACCTCATTTTACGTGCA---------ATC---ACAAAAGTATCTGGC---GGAGTA------------------------------------TTCTGGCGT---CTTATGATTGGCACCATGGTGATGCTCGCTGCGGGTTACATGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AGCGCA------------------TGGCTTGGG---TTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATT---------------TTT------CTT---GGCGAAGCAGGTCAAGTTGCTGCCAAC------GAA---GCTCCAGAATCTGTC---AAA---TCA---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATC---------------------------------------------------------------GGCTGG---------GCGATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMETQRVEG-KWKTSLTVSGLVTLVAAVHYFYMRDVWI----------ET-------GSTPLVYRYIDW--------LITVPLLMVEFYLILRA---I-TKVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGMVGWAYILYEI-----F--L-GEAGQVAAN--E-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_EU916075 [III-Alpha4-ARCTIC42C05] clone_A150007_EU916075 gi|229359031|gb|EU916075| Uncultured bacterium clone A150007 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A150007 putative proteorhodopsin gene, partial cds. EU916075 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTCGCCGCTACTGTGTTCTTCTTCATGGAGACCCAGCGCGTTGAGGGAAAATGGAAGACTTCACTGACGGTTTCCGGTCTTGTAACCTTAGTCGCCGCTGTGCATTATTTTTATATGCGGGATGTTTGGATCGGATCGACACCACTAGTTTATCGCTACATTGACTGGTTAATCACTGTGCCACTTTTGATGGTAGAATTTTACCTCATTTTACGTGCAATCAAAGTATCTGGCGGAGTATTCTGGCGCCTTATGATTGGCACCATGGTGATGCTCGCTGCGGGTTACATGGGCGAAGCAGGTTACATCAGCGCATGGCTTGGGTTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATTTTTCTTGGCGAAGCAGGTCAAGTTGCTGCCAACGAAGCTCCAGAATCTGTCAAATCAGCATTCTCAACAATGCGTTGGATTGTTACAATCGGTTGGGCGATCTAC MLAATVFFFMETQRVEGKWKTSLTVSGLVTLVAAVHYFYMRDVWIGSTPLVYRYIDWLITVPLLMVEFYLILRAIKVSGGVFWRLMIGTMVMLAAGYMGEAGYISAWLGFIVGMVGWAYILYEIFLGEAGQVAANEAPESVKSAFSTMRWIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTCGCCGCTACTGTGTTCTTCTTCATGGAGACCCAGCGCGTTGAGGGA---AAATGGAAGACTTCACTGACGGTTTCCGGTCTTGTAACCTTAGTCGCCGCTGTGCATTATTTTTATATGCGGGATGTTTGGATC---------------------------------------------------------GGATCGACACCACTAGTTTATCGCTACATTGACTGG------------------------TTAATCACTGTGCCACTTTTGATGGTAGAATTTTACCTCATTTTACGTGCA---------ATC------AAAGTATCTGGC---GGAGTA------------------------------------TTCTGGCGC---CTTATGATTGGCACCATGGTGATGCTCGCTGCGGGTTACATGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AGCGCA------------------TGGCTTGGG---TTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATT---------------TTT------CTT---GGCGAAGCAGGTCAAGTTGCTGCCAAC------GAA---GCTCCAGAATCTGTC---AAA---TCA---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATC---------------------------------------------------------------GGTTGG---------GCGATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFMETQRVEG-KWKTSLTVSGLVTLVAAVHYFYMRDVWI-------------------GSTPLVYRYIDW--------LITVPLLMVEFYLILRA---I--KVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGMVGWAYILYEI-----F--L-GEAGQVAAN--E-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_EF088597 [III-Alpha4-ARCTIC42C05] E400016_env_samples_EF088597 gi|126843435|gb|EF088597| Uncultured bacterium clone E400016 putative proteorhodopsin gene, partial cds Uncultured bacterium clone E400016 putative proteorhodopsin gene, partial cds EF088597 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na Bering_Sea_surface_water_sample Arctic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGCTCGCCGCTACTGTATTCTTCTTCATGGAGACCCAGCGCGTTGAAGGAAAATGGAAGACTTCACTGACGGTTTCCGGTCTTGTAACCTTAGTCGCCGCTGTGCATTATTTTTATATGCGGGATGTTTGGATCGAAACTGGATCGACACCACTAGTTTATCGCTACATTGACTGGTTAATCACTGTGCCACTTTTGATGGTAGAATTTTACCTCATTTTACGTGCAATCACAAAAGTATCTGGCGGAGTATTCTGGCGTCTTATGATTGGCACCATGGTGATGCTCGCTGCGGGTTACATGGGCGAAGCAGGTTACATCAGCGCATGGCTTGGGTTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATTTTTCTTGGCGAAGCAGGTCAAGTTGCTGCCAACGAAGCTCCAGAATCTGTCAAATCAGCATTCTCAACAATGCGTTGGATTGTTACAATCGGTTGGGCCATATATCCA MLAATVFFFMETQRVEGKWKTSLTVSGLVTLVAAVHYFYMRDVWIETGSTPLVYRYIDWLITVPLLMVEFYLILRAITKVSGGVFWRLMIGTMVMLAAGYMGEAGYISAWLGFIVGMVGWAYILYEIFLGEAGQVAANEAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTCGCCGCTACTGTATTCTTCTTCATGGAGACCCAGCGCGTTGAAGGA---AAATGGAAGACTTCACTGACGGTTTCCGGTCTTGTAACCTTAGTCGCCGCTGTGCATTATTTTTATATGCGGGATGTTTGGATC------------------------------GAAACT---------------------GGATCGACACCACTAGTTTATCGCTACATTGACTGG------------------------TTAATCACTGTGCCACTTTTGATGGTAGAATTTTACCTCATTTTACGTGCA---------ATC---ACAAAAGTATCTGGC---GGAGTA------------------------------------TTCTGGCGT---CTTATGATTGGCACCATGGTGATGCTCGCTGCGGGTTACATGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AGCGCA------------------TGGCTTGGG---TTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATT---------------TTT------CTT---GGCGAAGCAGGTCAAGTTGCTGCCAAC------GAA---GCTCCAGAATCTGTC---AAA---TCA---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATC---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFMETQRVEG-KWKTSLTVSGLVTLVAAVHYFYMRDVWI----------ET-------GSTPLVYRYIDW--------LITVPLLMVEFYLILRA---I-TKVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGMVGWAYILYEI-----F--L-GEAGQVAAN--E-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_FJ618970 [III-Alpha4-ARCTIC42C05] PR_707_07_03_env_samples_FJ618970 gi|223046823|gb|FJ618970| Uncultured bacterium clone PR 707 07 03 proteorhodopsin gene, partial cds Uncultured bacterium clone PR 707 07 03 proteorhodopsin gene, partial cds FJ618970 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-juil-09 #na Arctic_Ocean Arctic Ocean marine 71.37 -156.68 Photoheterotrophic microbes in the Arctic Ocean in summer and winter Cottrell,M.T. and Kirchman,D.L. Appl. Environ. Microbiol. 75 (15), 49584966 (2009) 19502441 #na TATGTAGATTGGTTAATCACTGTACCACTTCTGATGGTAGAATTTTACCTCATTTTACGTGCCATCACAAAAGTATCTGGCGGAGTATTCTGGCGTCTCATGATTGGCACCATGGTGATGCTCGCTGCGGGTTACATGGGCGAAGCAGGTTACATCAGCGCATGGCTTGGGTTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATTTTTCTTGGCGAAGCAGGTCAAGTTGCTGCCAACGAAGCTCCAGAATCTGTCAAGTCAGCATTCTCAACAATGCGTTGGATTGTTACAATCGGCTGGGCAATTTAT YVDWLITVPLLMVEFYLILRAITKVSGGVFWRLMIGTMVMLAAGYMGEAGYISAWLGFIVGMVGWAYILYEIFLGEAGQVAANEAPESVKSAFSTMRWIVTIGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTAGATTGG------------------------TTAATCACTGTACCACTTCTGATGGTAGAATTTTACCTCATTTTACGTGCC---------ATC---ACAAAAGTATCTGGC---GGAGTA------------------------------------TTCTGGCGT---CTCATGATTGGCACCATGGTGATGCTCGCTGCGGGTTACATGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AGCGCA------------------TGGCTTGGG---TTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATT---------------TTT------CTT---GGCGAAGCAGGTCAAGTTGCTGCCAAC------GAA---GCTCCAGAATCTGTC---AAG---TCA---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATC---------------------------------------------------------------GGCTGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LITVPLLMVEFYLILRA---I-TKVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGMVGWAYILYEI-----F--L-GEAGQVAAN--E-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_FJ618971 [III-Alpha4-ARCTIC42C05] PR_707_07_04_env_samples_FJ618971 gi|223046825|gb|FJ618971| Uncultured bacterium clone PR 707 07 04 proteorhodopsin gene, partial cds Uncultured bacterium clone PR 707 07 04 proteorhodopsin gene, partial cds FJ618971 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-juil-09 #na Arctic_Ocean Arctic Ocean marine 71.37 -156.68 Photoheterotrophic microbes in the Arctic Ocean in summer and winter Cottrell,M.T. and Kirchman,D.L. Appl. Environ. Microbiol. 75 (15), 49584966 (2009) 19502441 #na TATGTAGATTGGTTAATCACTGTACCACTTCTGATGGTAGAATTTTACCTCATTTTACGTGCCATCACAAAAGTATCTGGCGGAGTATTCTGGCGTCTCATGATTGGCACCATGGTGATGCTCGCTGCGGGTTACATGGGCGAAGCAGGTTACATCAGCGCATGGCTTGGGTTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATTTTTCTTGGCGAAGCAGGTCAAGTTGCTGCCAACGAAGCTCCAGAATCTGTCAAGTCAGCATTCTCAACAATGCGTTGGATTGTTACAATCGGCTGGGCAATTTAT YVDWLITVPLLMVEFYLILRAITKVSGGVFWRLMIGTMVMLAAGYMGEAGYISAWLGFIVGMVGWAYILYEIFLGEAGQVAANEAPESVKSAFSTMRWIVTIGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTAGATTGG------------------------TTAATCACTGTACCACTTCTGATGGTAGAATTTTACCTCATTTTACGTGCC---------ATC---ACAAAAGTATCTGGC---GGAGTA------------------------------------TTCTGGCGT---CTCATGATTGGCACCATGGTGATGCTCGCTGCGGGTTACATGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AGCGCA------------------TGGCTTGGG---TTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATT---------------TTT------CTT---GGCGAAGCAGGTCAAGTTGCTGCCAAC------GAA---GCTCCAGAATCTGTC---AAG---TCA---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATC---------------------------------------------------------------GGCTGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LITVPLLMVEFYLILRA---I-TKVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGMVGWAYILYEI-----F--L-GEAGQVAAN--E-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_FJ618987 [III-Alpha4-ARCTIC42C05] PR_707_07_23_env_samples_FJ618987 gi|223046857|gb|FJ618987| Uncultured bacterium clone PR 707 07 23 proteorhodopsin gene, partial cds Uncultured bacterium clone PR 707 07 23 proteorhodopsin gene, partial cds FJ618987 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-juil-09 #na Arctic_Ocean Arctic Ocean marine 71.37 -156.68 Photoheterotrophic microbes in the Arctic Ocean in summer and winter Cottrell,M.T. and Kirchman,D.L. Appl. Environ. Microbiol. 75 (15), 49584966 (2009) 19502441 #na TACGTCGATTGGTTAATCACTGTACCACTTCTGATGGTAGAATTTTACCTTATTTTACGTGCCATCACAAAAGTATCTGGCGGAGTATTCTGGCGTCTCATGATTGGCACCATGGTGATGCTAGCTGCGGGTTACATGGGCGAAGCAGGTTACATCAGCGCATGGCTTGGGTTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATTTTTCTTGGCGAAGCAGGTCAAGTTGCTGCCAACGAAGCTCCAGAATCTGTCAAGTCAGCATTCTCAACAATGCGTTGGATTGTTACAATCGGCTGGGCCATTTAC YVDWLITVPLLMVEFYLILRAITKVSGGVFWRLMIGTMVMLAAGYMGEAGYISAWLGFIVGMVGWAYILYEIFLGEAGQVAANEAPESVKSAFSTMRWIVTIGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACGTCGATTGG------------------------TTAATCACTGTACCACTTCTGATGGTAGAATTTTACCTTATTTTACGTGCC---------ATC---ACAAAAGTATCTGGC---GGAGTA------------------------------------TTCTGGCGT---CTCATGATTGGCACCATGGTGATGCTAGCTGCGGGTTACATGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AGCGCA------------------TGGCTTGGG---TTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATT---------------TTT------CTT---GGCGAAGCAGGTCAAGTTGCTGCCAAC------GAA---GCTCCAGAATCTGTC---AAG---TCA---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATC---------------------------------------------------------------GGCTGG---------GCCATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LITVPLLMVEFYLILRA---I-TKVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGMVGWAYILYEI-----F--L-GEAGQVAAN--E-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_FJ618984 [III-Alpha4-ARCTIC42C05] PR_707_07_20_env_samples_FJ618984 gi|223046851|gb|FJ618984| Uncultured bacterium clone PR 707 07 20 proteorhodopsin gene, partial cds Uncultured bacterium clone PR 707 07 20 proteorhodopsin gene, partial cds FJ618984 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-juil-09 #na Arctic_Ocean Arctic Ocean marine 71.37 -156.68 Photoheterotrophic microbes in the Arctic Ocean in summer and winter Cottrell,M.T. and Kirchman,D.L. Appl. Environ. Microbiol. 75 (15), 49584966 (2009) 19502441 #na TATGTAGACTGGTTAATCACTGTACCACTTCTGATGGTAGAATTTTACCTCATTTTACGTGCCATCACAAAAGTATCTGGCGGAGTATTCTGGCGTCTCATGATTGGCACCATGGTGATGCTCGCTGCGGGTTACATGGGCGAAGCAGGTTACATCAGCGCATGGCTTGGGTTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATTTTTCTTGGCGAAGCAGGTCAAGTTGCTGCCAACGAAGCTCCAGAATCTGTCAAGTCAGCATTCTCAACAATGCGTTGGATTGTTACAATCGGTTGGGCCATATAC YVDWLITVPLLMVEFYLILRAITKVSGGVFWRLMIGTMVMLAAGYMGEAGYISAWLGFIVGMVGWAYILYEIFLGEAGQVAANEAPESVKSAFSTMRWIVTIGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTAGACTGG------------------------TTAATCACTGTACCACTTCTGATGGTAGAATTTTACCTCATTTTACGTGCC---------ATC---ACAAAAGTATCTGGC---GGAGTA------------------------------------TTCTGGCGT---CTCATGATTGGCACCATGGTGATGCTCGCTGCGGGTTACATGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AGCGCA------------------TGGCTTGGG---TTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATT---------------TTT------CTT---GGCGAAGCAGGTCAAGTTGCTGCCAAC------GAA---GCTCCAGAATCTGTC---AAG---TCA---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATC---------------------------------------------------------------GGTTGG---------GCCATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LITVPLLMVEFYLILRA---I-TKVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGMVGWAYILYEI-----F--L-GEAGQVAAN--E-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_EF088602 [III-Alpha4-ARCTIC42C05] E400023_env_samples_EF088602 gi|126843445|gb|EF088602| Uncultured bacterium clone E400023 putative proteorhodopsin gene, partial cds Uncultured bacterium clone E400023 putative proteorhodopsin gene, partial cds EF088602 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na Bering_Sea_surface_water_sample Arctic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTGGCCGCTACTGTTTTCTTCTTCATGGAGACCCAGCGCGTTGAAGGAAAATGGAAGACTTCACTGACGGTTTCCGGTCTTGTAACCCTGGTCGCCGCTGTGCATTATTTTTACATGCGAGATGTTTGGATCGAAACTGGATCGACACCACTTGTCTATCGCTACATTGACTGGTTAATCACCGTACCACTTCTGATGGTAGAATTTTACCTCATCTTACGTGCCATCACAAAAGTATCTGGCGGAGTATTCTGGCGTCTCATGATTGGCACCATGGTTATGCTCGCTGCAGGTTACATGGGCGAAGCCGGTTACATCAGCGCATGGCTTGGGTTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATTTTTCTTGGAGAAGCAGGTCAAGTTGCTGCCAACGAAGCTCCCGAATCTGTCAAGTCAGCATTCTCAACAATGCGTTGGATTGTTACAATCGGTTGGGCAATTTACCCA MVAATVFFFMETQRVEGKWKTSLTVSGLVTLVAAVHYFYMRDVWIETGSTPLVYRYIDWLITVPLLMVEFYLILRAITKVSGGVFWRLMIGTMVMLAAGYMGEAGYISAWLGFIVGMVGWAYILYEIFLGEAGQVAANEAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTTTTCTTCTTCATGGAGACCCAGCGCGTTGAAGGA---AAATGGAAGACTTCACTGACGGTTTCCGGTCTTGTAACCCTGGTCGCCGCTGTGCATTATTTTTACATGCGAGATGTTTGGATC------------------------------GAAACT---------------------GGATCGACACCACTTGTCTATCGCTACATTGACTGG------------------------TTAATCACCGTACCACTTCTGATGGTAGAATTTTACCTCATCTTACGTGCC---------ATC---ACAAAAGTATCTGGC---GGAGTA------------------------------------TTCTGGCGT---CTCATGATTGGCACCATGGTTATGCTCGCTGCAGGTTACATGGGCGAA---------GCC------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AGCGCA------------------TGGCTTGGG---TTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATT---------------TTT------CTT---GGAGAAGCAGGTCAAGTTGCTGCCAAC------GAA---GCTCCCGAATCTGTC---AAG---TCA---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATC---------------------------------------------------------------GGTTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMETQRVEG-KWKTSLTVSGLVTLVAAVHYFYMRDVWI----------ET-------GSTPLVYRYIDW--------LITVPLLMVEFYLILRA---I-TKVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGMVGWAYILYEI-----F--L-GEAGQVAAN--E-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_JX863123 [III-Alpha4-ARCTIC42C05] MALINA_OTU03a_334_L_env_samples_JX863123 gi|425477196|gb|JX863123| Uncultured bacterium clone MALINA OTU03a 334 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU03a 334 L putative proteorhodopsin gene, partial cds JX863123 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 11-juil-09 0m_depth Arctic Ocean marine 67.49 -168.12 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATCACTGTACCACTTCTGATGGTAGAATTTTACCTCATTTTACGTGCCATCACAAAAGTATCTGGCGGAGTATTCTGGCGTCTCATGATTGGCACCATGGTGATGCTCGCTGCGGGTCACATGGGCGAGGCAGGTTACATCAGCGCATGGCTTGGGTTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATTTTTCTTGGCGAAGCAGGTCAAGTTGCTGCCAACGAGGCTCCAGAATCTGTCAAGTCAGCATTCTCAACAATGCGTTGGATTGTTACAATC WLITVPLLMVEFYLILRAITKVSGGVFWRLMIGTMVMLAAGHMGEAGYISAWLGFIVGMVGWAYILYEIFLGEAGQVAANEAPESVKSAFSTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATCACTGTACCACTTCTGATGGTAGAATTTTACCTCATTTTACGTGCC---------ATC---ACAAAAGTATCTGGC---GGAGTA------------------------------------TTCTGGCGT---CTCATGATTGGCACCATGGTGATGCTCGCTGCGGGTCACATGGGCGAG---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AGCGCA------------------TGGCTTGGG---TTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATT---------------TTT------CTT---GGCGAAGCAGGTCAAGTTGCTGCCAAC------GAG---GCTCCAGAATCTGTC---AAG---TCA---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYLILRA---I-TKVSG-GV------------FWR-LMIGTMVMLAAGHMGE---A------G--Y-----------I----------------------SA------WLG-FIVGMVGWAYILYEI-----F--L-GEAGQVAAN--E-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_JX863122 [III-Alpha4-ARCTIC42C05] MALINA_OTU03a_313_L_env_samples_JX863122 gi|425477194|gb|JX863122| Uncultured bacterium clone MALINA OTU03a 313 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU03a 313 L putative proteorhodopsin gene, partial cds JX863122 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 11-juil-09 0m_depth Arctic Ocean marine 67.49 -168.12 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATCACTGTACCACTTCTGATGGCAGAATTTTACCTCATTTTACGTGCCATCACAAAAGTATCTGGCGGAGTATTCTGGCGTCTCATGATTGGCACCATGGTGATGCTCGCTGCGGGTTACATGGGCGAAGCAGGTTACATCAGCGCATGGCTTGGGTTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATTTTTCTTGGCGAAGCAGGTCAAGTTGCTGCCAACGAAGCTCCAGAATCTGTCAAGTCAGCATTCTCAACAATGCGTTGGATTGTTACAATC WLITVPLLMAEFYLILRAITKVSGGVFWRLMIGTMVMLAAGYMGEAGYISAWLGFIVGMVGWAYILYEIFLGEAGQVAANEAPESVKSAFSTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATCACTGTACCACTTCTGATGGCAGAATTTTACCTCATTTTACGTGCC---------ATC---ACAAAAGTATCTGGC---GGAGTA------------------------------------TTCTGGCGT---CTCATGATTGGCACCATGGTGATGCTCGCTGCGGGTTACATGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AGCGCA------------------TGGCTTGGG---TTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATT---------------TTT------CTT---GGCGAAGCAGGTCAAGTTGCTGCCAAC------GAA---GCTCCAGAATCTGTC---AAG---TCA---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMAEFYLILRA---I-TKVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGMVGWAYILYEI-----F--L-GEAGQVAAN--E-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_FJ618972 [III-Alpha4-ARCTIC42C05] PR_707_07_06_env_samples_FJ618972 gi|223046827|gb|FJ618972| Uncultured bacterium clone PR 707 07 06 proteorhodopsin gene, partial cds Uncultured bacterium clone PR 707 07 06 proteorhodopsin gene, partial cds FJ618972 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-juil-09 #na Arctic_Ocean Arctic Ocean marine 71.37 -156.68 Photoheterotrophic microbes in the Arctic Ocean in summer and winter Cottrell,M.T. and Kirchman,D.L. Appl. Environ. Microbiol. 75 (15), 49584966 (2009) 19502441 #na TATGTTGACTGGTTAATCACTGTACCACTTCTGATGGTAGAATTTTACCTTATTTTACGTGCCATCACAAAAGTATCTGGCGGAGTATTCTGGCGTCTCATGATTGGCACCATGGTGATGCTCGCTGCGGGTTACATGGGCGAAGCAGGTTACATCAGCGCATGGCTTGGGTTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATTTTTCTTGGCGAAGCGGGTCAAGTTGCTGCCAACGAAGCTCCAGAATCTGTCAAGTCAGCATTCTCAACAATGCGTTGGATTGTTACAATCGGATGGGCCATTTAC YVDWLITVPLLMVEFYLILRAITKVSGGVFWRLMIGTMVMLAAGYMGEAGYISAWLGFIVGMVGWAYILYEIFLGEAGQVAANEAPESVKSAFSTMRWIVTIGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTTGACTGG------------------------TTAATCACTGTACCACTTCTGATGGTAGAATTTTACCTTATTTTACGTGCC---------ATC---ACAAAAGTATCTGGC---GGAGTA------------------------------------TTCTGGCGT---CTCATGATTGGCACCATGGTGATGCTCGCTGCGGGTTACATGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AGCGCA------------------TGGCTTGGG---TTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATT---------------TTT------CTT---GGCGAAGCGGGTCAAGTTGCTGCCAAC------GAA---GCTCCAGAATCTGTC---AAG---TCA---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATC---------------------------------------------------------------GGATGG---------GCCATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LITVPLLMVEFYLILRA---I-TKVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGMVGWAYILYEI-----F--L-GEAGQVAAN--E-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_FJ618980 [III-Alpha4-ARCTIC42C05] PR_707_07_16_env_samples_FJ618980 gi|223046843|gb|FJ618980| Uncultured bacterium clone PR 707 07 16 proteorhodopsin gene, partial cds Uncultured bacterium clone PR 707 07 16 proteorhodopsin gene, partial cds FJ618980 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-juil-09 #na Arctic_Ocean Arctic Ocean marine 71.37 -156.68 Photoheterotrophic microbes in the Arctic Ocean in summer and winter Cottrell,M.T. and Kirchman,D.L. Appl. Environ. Microbiol. 75 (15), 49584966 (2009) 19502441 #na TATGTTGACTGGTTAATCACTGTACCACTTCTGATGGTAGAATTTTACCTTATTTTACGTGCCATCACAAAAGTATCTGGCGGAGTATTCTGGCGTCTCATGATTGGCACCATGGTGATGCTCGCTGCGGGTTACATGGGCGAAGCAGGTTACATCAGCGCATGGCTTGGGTTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATTTTTCTTGGCGAAGCGGGTCAAGTTGCTGCCAACGAAGCTCCAGAATCTGTCAAGTCAGCATTCTCAACAATGCGTTGGATTGTTACAATCGGATGGGCCATTTAC YVDWLITVPLLMVEFYLILRAITKVSGGVFWRLMIGTMVMLAAGYMGEAGYISAWLGFIVGMVGWAYILYEIFLGEAGQVAANEAPESVKSAFSTMRWIVTIGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTTGACTGG------------------------TTAATCACTGTACCACTTCTGATGGTAGAATTTTACCTTATTTTACGTGCC---------ATC---ACAAAAGTATCTGGC---GGAGTA------------------------------------TTCTGGCGT---CTCATGATTGGCACCATGGTGATGCTCGCTGCGGGTTACATGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AGCGCA------------------TGGCTTGGG---TTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATT---------------TTT------CTT---GGCGAAGCGGGTCAAGTTGCTGCCAAC------GAA---GCTCCAGAATCTGTC---AAG---TCA---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATC---------------------------------------------------------------GGATGG---------GCCATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LITVPLLMVEFYLILRA---I-TKVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGMVGWAYILYEI-----F--L-GEAGQVAAN--E-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_FJ618986 [III-Alpha4-ARCTIC42C05] PR_707_07_22_env_samples_FJ618986 gi|223046855|gb|FJ618986| Uncultured bacterium clone PR 707 07 22 proteorhodopsin gene, partial cds Uncultured bacterium clone PR 707 07 22 proteorhodopsin gene, partial cds FJ618986 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-juil-09 #na Arctic_Ocean Arctic Ocean marine 71.37 -156.68 Photoheterotrophic microbes in the Arctic Ocean in summer and winter Cottrell,M.T. and Kirchman,D.L. Appl. Environ. Microbiol. 75 (15), 49584966 (2009) 19502441 #na TACGTCGATTGGTTAATCACTGTACCACTTCTGATGGTAGAATTTTACCTTATTTTACGTGCCATCACAAAAGTATCTGGCGGAGTATTCTGGCGTCTCATGATTGGCACCATGGTGATGCTCGCTGCGGGTTACATGGGCGAAGCAGGTTACATCAGCGCATGGCTTGGGTTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATTTTTCTTGGCGAAGCGGGTCAAGTTGCTGCCAACGAAGCTCCAGAATCTGTCAAGTCAGCATTCTCAACAATGCGTTGGATTGTTACAATCGGATGGGCAATATAC YVDWLITVPLLMVEFYLILRAITKVSGGVFWRLMIGTMVMLAAGYMGEAGYISAWLGFIVGMVGWAYILYEIFLGEAGQVAANEAPESVKSAFSTMRWIVTIGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACGTCGATTGG------------------------TTAATCACTGTACCACTTCTGATGGTAGAATTTTACCTTATTTTACGTGCC---------ATC---ACAAAAGTATCTGGC---GGAGTA------------------------------------TTCTGGCGT---CTCATGATTGGCACCATGGTGATGCTCGCTGCGGGTTACATGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AGCGCA------------------TGGCTTGGG---TTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATT---------------TTT------CTT---GGCGAAGCGGGTCAAGTTGCTGCCAAC------GAA---GCTCCAGAATCTGTC---AAG---TCA---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATC---------------------------------------------------------------GGATGG---------GCAATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LITVPLLMVEFYLILRA---I-TKVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGMVGWAYILYEI-----F--L-GEAGQVAAN--E-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_FJ618978 [III-Alpha4-ARCTIC42C05] PR_707_07_13_env_samples_FJ618978 gi|223046839|gb|FJ618978| Uncultured bacterium clone PR 707 07 13 proteorhodopsin gene, partial cds Uncultured bacterium clone PR 707 07 13 proteorhodopsin gene, partial cds FJ618978 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-juil-09 #na Arctic_Ocean Arctic Ocean marine 71.37 -156.68 Photoheterotrophic microbes in the Arctic Ocean in summer and winter Cottrell,M.T. and Kirchman,D.L. Appl. Environ. Microbiol. 75 (15), 49584966 (2009) 19502441 #na TACGTTGATTGGTTAATCACTGTACCACTTCTGATGGTAGAATTTTACCTTATTTTACGTGCCATCACAAAAGTATCTGGCGGAGTATTCTGGCGTCTCATGATTGGCACCATGGTGATGCTCGCTGCGGGTTACATGGGCGAAGCAGGTTACATCAGCGCATGGCTTGGGTTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATTTTTCTTGGCGAAGCAGGTCAAGTTGCTGCCAACGAGGCTCCAGAATCTGTCAAGTCAGCATTCTCAACAATGCGTTGGATTGTTACAATCGGATGGGCAATTTAC YVDWLITVPLLMVEFYLILRAITKVSGGVFWRLMIGTMVMLAAGYMGEAGYISAWLGFIVGMVGWAYILYEIFLGEAGQVAANEAPESVKSAFSTMRWIVTIGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACGTTGATTGG------------------------TTAATCACTGTACCACTTCTGATGGTAGAATTTTACCTTATTTTACGTGCC---------ATC---ACAAAAGTATCTGGC---GGAGTA------------------------------------TTCTGGCGT---CTCATGATTGGCACCATGGTGATGCTCGCTGCGGGTTACATGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AGCGCA------------------TGGCTTGGG---TTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATT---------------TTT------CTT---GGCGAAGCAGGTCAAGTTGCTGCCAAC------GAG---GCTCCAGAATCTGTC---AAG---TCA---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATC---------------------------------------------------------------GGATGG---------GCAATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LITVPLLMVEFYLILRA---I-TKVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGMVGWAYILYEI-----F--L-GEAGQVAAN--E-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_FJ618976 [III-Alpha4-ARCTIC42C05] PR_707_07_11_env_samples_FJ618976 gi|223046835|gb|FJ618976| Uncultured bacterium clone PR 707 07 11 proteorhodopsin gene, partial cds Uncultured bacterium clone PR 707 07 11 proteorhodopsin gene, partial cds FJ618976 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-juil-09 #na Arctic_Ocean Arctic Ocean marine 71.37 -156.68 Photoheterotrophic microbes in the Arctic Ocean in summer and winter Cottrell,M.T. and Kirchman,D.L. Appl. Environ. Microbiol. 75 (15), 49584966 (2009) 19502441 #na TACATTGATTGGTTAATCACTGTACCACTTCTGATGGTAGAATTTTACCTTATTTTACGTGCCATCACAAAAGTATCTGGCGGAGTATTCTGGCGTCCCATGATTGGCACCATGGTGATGCTCGCTGCGGGTTACATGGGCGAAGCAGGTTACATCAGCGCATGGCTTGGGTTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATTTTTCTTGGCGAAGCAGGTCAAGTTGCTGCCAACGAAGCTCCAGAATCTGTCAAGTCAGCATTCTCAACAATGCGTTGGATTGTTACAATCGGATGGGCAATATAT YIDWLITVPLLMVEFYLILRAITKVSGGVFWRPMIGTMVMLAAGYMGEAGYISAWLGFIVGMVGWAYILYEIFLGEAGQVAANEAPESVKSAFSTMRWIVTIGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACATTGATTGG------------------------TTAATCACTGTACCACTTCTGATGGTAGAATTTTACCTTATTTTACGTGCC---------ATC---ACAAAAGTATCTGGC---GGAGTA------------------------------------TTCTGGCGT---CCCATGATTGGCACCATGGTGATGCTCGCTGCGGGTTACATGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AGCGCA------------------TGGCTTGGG---TTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATT---------------TTT------CTT---GGCGAAGCAGGTCAAGTTGCTGCCAAC------GAA---GCTCCAGAATCTGTC---AAG---TCA---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATC---------------------------------------------------------------GGATGG---------GCAATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YIDW--------LITVPLLMVEFYLILRA---I-TKVSG-GV------------FWR-PMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGMVGWAYILYEI-----F--L-GEAGQVAAN--E-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_EU795236 [III-Alpha4-ARCTIC42C05] ARCTIC42_C_5_genomic_EU795236 gi|193084450|gb|EU795236| Uncultured bacterium ARCTIC42 C 05 genomic sequence Uncultured bacterium ARCTIC42 C 05 genomic sequence EU795236 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:542435 genomic_DNA other 02-juil-08 #na Arctic Arctic Ocean marine 71.4 -156.8 Direct Submission Henn,M.R., Young,S., Jaffe,D.B., Gnerre,S., Berlin,A., Heiman,D., Hepburn,T., Sykes,S., Kirchman,D.L., Cottrell,M.T., Lander,E., Nusbaum,C. and Birren,B. Submitted (21MAY2008) Broad Institute of MIT and Harvard, 320 Charles Street, Cambridge, MA 02141, USA #na #na ATGAAGACGATTTATGGTAGAATAAAACTTATGGGAGCAAGCGCTGCGTTAATTGCAGCACCAAACTTTGCTCAAGCAGCCTCAAATCTAGAGTCAGATGATTTTGTCGGTATTTCCTTTTGGCTAATATCGATGGCCTTAGTTGCCGCAACCGCTTTCTTCTTCATGGAGACCCAGCGCGTTGAGGGAAAATGGAAGACTTCACTGACGGTTTCCGGTCTTGTAACCTTGGTCGCCGCTGTGCATTATTTTTATATGCGGGATGTTTGGATCGAAACTGGATCGACGCCACTAGTGTATCGCTACATTGACTGGTTAATCACTGTACCACTTCTGATGGTAGAATTTTACCTTATTTTACGTGCCATCACAAAAGTATCTGGCGGAGTATTCTGGCGTCTCATGATTGGCACCATGGTGATGCTCGCTGCGGGTTACATGGGCGAAGCAGGTTACATCAGCGCATGGCTTGGGTTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATTTTTCTTGGCGAAGCGGGTCAAGTTGCTGCCAACGAAGCTCCAGAATCTGTCAAGTCAGCATTCTCAACAATGCGTTGGATTGTTACAATCGGTTGGGCAATTTATCCAATAGGTTATTTTATGGGTTACTTTACTGGGGCAGGACCGGAAGAAGCCTCTAGCATGCTTAACATCATATATAACCTTGCAGACGTGGTAAATAAAATTGCGTTTGGTGTAATCATCTGGAACGTAGCCGTTACAGAATCTGACAAAGCCAAAGCA MKTIYGRIKLMGASAALIAAPNFAQAASNLESDDFVGISFWLISMALVAATAFFFMETQRVEGKWKTSLTVSGLVTLVAAVHYFYMRDVWIETGSTPLVYRYIDWLITVPLLMVEFYLILRAITKVSGGVFWRLMIGTMVMLAAGYMGEAGYISAWLGFIVGMVGWAYILYEIFLGEAGQVAANEAPESVKSAFSTMRWIVTIGWAIYPIGYFMGYFTGAGPEEASSMLNIIYNLADVVNKIAFGVIIWNVAVTESDKAKA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAGACGATTTATGGTAGAATAAAACTTATGGGAGCAAGCGCTGCGTTAATTGCAGCACCAAACTTTGCTCAAGCAGCCTCAAATCTAGAGTCAGATGATTTTGTCGGTATTTCCTTTTGGCTAATATCGATGGCCTTAGTTGCCGCAACCGCTTTCTTCTTCATGGAGACCCAGCGCGTTGAGGGA---AAATGGAAGACTTCACTGACGGTTTCCGGTCTTGTAACCTTGGTCGCCGCTGTGCATTATTTTTATATGCGGGATGTTTGGATC------------------------------GAAACT---------------------GGATCGACGCCACTAGTGTATCGCTACATTGACTGG------------------------TTAATCACTGTACCACTTCTGATGGTAGAATTTTACCTTATTTTACGTGCC---------ATC---ACAAAAGTATCTGGC---GGAGTA------------------------------------TTCTGGCGT---CTCATGATTGGCACCATGGTGATGCTCGCTGCGGGTTACATGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AGCGCA------------------TGGCTTGGG---TTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATT---------------TTT------CTT---GGCGAAGCGGGTCAAGTTGCTGCCAAC------GAA---GCTCCAGAATCTGTC---AAG---TCA---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATC---------------------------------------------------------------GGTTGG---------GCAATTTATCCAATAGGTTATTTTATGGGTTACTTTACT------------------------------GGGGCAGGACCGGAAGAAGCCTCTAGCATGCTTAACATCATATATAACCTTGCAGACGTGGTAAATAAAATTGCGTTTGGTGTAATCATCTGGAACGTAGCCGTTACAGAA---TCTGACAAAGCCAAAGCA--------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------MKTIYGRIKLMGASAALIAAPNFAQAASNLESDDFVGISFWLISMALVAATAFFFMETQRVEG-KWKTSLTVSGLVTLVAAVHYFYMRDVWI----------ET-------GSTPLVYRYIDW--------LITVPLLMVEFYLILRA---I-TKVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGMVGWAYILYEI-----F--L-GEAGQVAAN--E-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYPIGYFMGYFT----------GAGPEEASSMLNIIYNLADVVNKIAFGVIIWNVAVTE-SDKAKA----------------------------------- [III-Alpha4-ARCTIC42C05]_JX863119 [III-Alpha4-ARCTIC42C05] MALINA_OTU03a_005_L_env_samples_JX863119 gi|425477188|gb|JX863119| Uncultured bacterium clone MALINA OTU03a 005 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU03a 005 L putative proteorhodopsin gene, partial cds JX863119 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 07Aug2009 5m_depth Arctic Ocean marine 70.91 -128.92 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAGTCACTGTACCACCTCTGATGGTAGAATTTTACCTTATTTTACGTGCCATCACAAAAGTATCTGGCGGAGTATTCTGGCGTCTCATGATTGGCACCATGGTGATGCTCGCTGCGGGTTACATGGGCGAAGCAGGTTACATCAGCGCATGGCTTGGGTTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATTTTTCTTGGCGAAGCAGGTCAAGTTGCTGCCAACGAAGCTCCAGAATCTGTCAAGTCAGCATTCTCAACAATGCGTTGGATTGTTACAATC WLVTVPPLMVEFYLILRAITKVSGGVFWRLMIGTMVMLAAGYMGEAGYISAWLGFIVGMVGWAYILYEIFLGEAGQVAANEAPESVKSAFSTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAGTCACTGTACCACCTCTGATGGTAGAATTTTACCTTATTTTACGTGCC---------ATC---ACAAAAGTATCTGGC---GGAGTA------------------------------------TTCTGGCGT---CTCATGATTGGCACCATGGTGATGCTCGCTGCGGGTTACATGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AGCGCA------------------TGGCTTGGG---TTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATT---------------TTT------CTT---GGCGAAGCAGGTCAAGTTGCTGCCAAC------GAA---GCTCCAGAATCTGTC---AAG---TCA---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LVTVPPLMVEFYLILRA---I-TKVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGMVGWAYILYEI-----F--L-GEAGQVAAN--E-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_JX863121 [III-Alpha4-ARCTIC42C05] MALINA_OTU03a_458_L_env_samples_JX863121 gi|425477192|gb|JX863121| Uncultured bacterium clone MALINA OTU03a 458 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU03a 458 L putative proteorhodopsin gene, partial cds JX863121 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 13Aug2009 0m_depth Arctic Ocean marine 69.25 -137.2 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATCACTGTACCACTTCTGATGGTAGAATTTTACCTTATTTTACGTGCCATCACAAAAGTATCTGGCGGAGTATTCTGGCGTCTCATGATTGGCACCATGGTGATGCTCGCTGCGGGTTACATGGGCGAAGCAGGTTACATCAGCGCATGGCTTGGGTTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATTTTTCTTGGCGAAGCAGGTCAAGTTGCTGCCAACGAAGCTCCAGAATCTGTCAAGTCAGCATTCTCAACAATGCGTTGGATTGTTACAATC WLITVPLLMVEFYLILRAITKVSGGVFWRLMIGTMVMLAAGYMGEAGYISAWLGFIVGMVGWAYILYEIFLGEAGQVAANEAPESVKSAFSTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATCACTGTACCACTTCTGATGGTAGAATTTTACCTTATTTTACGTGCC---------ATC---ACAAAAGTATCTGGC---GGAGTA------------------------------------TTCTGGCGT---CTCATGATTGGCACCATGGTGATGCTCGCTGCGGGTTACATGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AGCGCA------------------TGGCTTGGG---TTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATT---------------TTT------CTT---GGCGAAGCAGGTCAAGTTGCTGCCAAC------GAA---GCTCCAGAATCTGTC---AAG---TCA---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYLILRA---I-TKVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGMVGWAYILYEI-----F--L-GEAGQVAAN--E-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_JX863120 [III-Alpha4-ARCTIC42C05] MALINA_OTU03a_017_L_env_samples_JX863120 gi|425477190|gb|JX863120| Uncultured bacterium clone MALINA OTU03a 017 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU03a 017 L putative proteorhodopsin gene, partial cds JX863120 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 07Aug2009 5m_depth Arctic Ocean marine 70.91 -128.92 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATCACTGTACCACTTCTGATGGTAGAACTTTACCTTATTTTACGTGCCATCACAAAAGTATCTGGCGGAGTATTCTGGCGTCTCATGATTGGCACCATGGTGATGCTCGCTGCGGGTTACATGGGCGAAGCAGGTTACATCAGCGCATGGCTTGGGTTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATTTTTCTTGGCGAAGCAGGTCAAGTTGCTGCCAACGAAGCTCCAGAATCTGTCAAGTCAGCATTCTCAGCAATGCGTTGGATTGTTACAATC WLITVPLLMVELYLILRAITKVSGGVFWRLMIGTMVMLAAGYMGEAGYISAWLGFIVGMVGWAYILYEIFLGEAGQVAANEAPESVKSAFSAMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATCACTGTACCACTTCTGATGGTAGAACTTTACCTTATTTTACGTGCC---------ATC---ACAAAAGTATCTGGC---GGAGTA------------------------------------TTCTGGCGT---CTCATGATTGGCACCATGGTGATGCTCGCTGCGGGTTACATGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AGCGCA------------------TGGCTTGGG---TTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATT---------------TTT------CTT---GGCGAAGCAGGTCAAGTTGCTGCCAAC------GAA---GCTCCAGAATCTGTC---AAG---TCA---GCA---TTC---TCA---GCAATG---CGTTGGATTGTTACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVELYLILRA---I-TKVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGMVGWAYILYEI-----F--L-GEAGQVAAN--E-APESV-K-S-A-F-S-AM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-b]_EF088587 [III-Alpha4-b] E400002_env_samples_EF088587 gi|126843415|gb|EF088587| Uncultured bacterium clone E400002 putative proteorhodopsin gene, partial cds Uncultured bacterium clone E400002 putative proteorhodopsin gene, partial cds EF088587 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na Bering_Sea_surface_water_sample Arctic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTGGCCGCTACTGCATTCTTCTTCTTGGAAACCCAGCGGGTTGAAGGCAAGTGGAAGACATCGCTGACCGTTTCAGGTCTCGTAACACTAGTTGCAGCAGTACACTACTTTTACATGCGTGACGTGTGGGTCGAAACAGGTGCAACACCGTTAGTATACCGTTACATTGATTGGCTAATTACAGTGCCACTCTTGATGGTTGAGTTCTACTTAATTCTGCGCGCGATTACCGCAGTTTCGGGTGGAGTATTCTGGCGTCTAATGATTGGTACAGTTGTGATGCTAGCAGCTGGCTATATGGGCGAAGCTGGATACATCAACGTAATGTTAGGTTTCGTAGTAGGTATAGTCGGTTGGGCATACATCCTTTATGAGATCTTCTTTGGTGAAGCTGGAAAAGTTGCGGCAGAAAAAGCCCCAGCATCGGTACAATCTGCATTCTCAACAATGCGTTGGATCGTAACAATCGGTTGGGCCATCTATCCA MVAATAFFFLETQRVEGKWKTSLTVSGLVTLVAAVHYFYMRDVWVETGATPLVYRYIDWLITVPLLMVEFYLILRAITAVSGGVFWRLMIGTVVMLAAGYMGEAGYINVMLGFVVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCATTCTTCTTCTTGGAAACCCAGCGGGTTGAAGGC---AAGTGGAAGACATCGCTGACCGTTTCAGGTCTCGTAACACTAGTTGCAGCAGTACACTACTTTTACATGCGTGACGTGTGGGTC------------------------------GAAACA---------------------GGTGCAACACCGTTAGTATACCGTTACATTGATTGG------------------------CTAATTACAGTGCCACTCTTGATGGTTGAGTTCTACTTAATTCTGCGCGCG---------ATT---ACCGCAGTTTCGGGT---GGAGTA------------------------------------TTCTGGCGT---CTAATGATTGGTACAGTTGTGATGCTAGCAGCTGGCTATATGGGCGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGTA------------------ATGTTAGGT---TTCGTAGTAGGTATAGTCGGTTGGGCATACATCCTTTATGAGATC---------------TTC------TTT---GGTGAAGCTGGAAAAGTTGCGGCAGAA------AAA---GCCCCAGCATCGGTA---CAA---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATCGTAACAATC---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLETQRVEG-KWKTSLTVSGLVTLVAAVHYFYMRDVWV----------ET-------GATPLVYRYIDW--------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTVVMLAAGYMGE---A------G--Y-----------I----------------------NV------MLG-FVVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha4-b]_EF088589 [III-Alpha4-b] E400004_env_samples_EF088589 gi|126843419|gb|EF088589| Uncultured bacterium clone E400004 putative proteorhodopsin gene, partial cds Uncultured bacterium clone E400004 putative proteorhodopsin gene, partial cds EF088589 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na Bering_Sea_surface_water_sample Arctic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTGGCCGCTACTGTTTTCTTCTTGGAAACCCAGCGGGTTGAAGGCAAGTGGAAGACATCGCTGACCGTTTCAGGTCTCGTAACACTAGTTGCAGCAGTACACTACTTTTACATGCGTGACGTGTGGGTCGAAACAGGTGCAACACCGTTAGTATACCGTTACATTGATTGGCTAATTACAGTGCCACTCTTGATGGTTGAGTTCTACTTAATTCTGCGCGCGATTACCGCAGTTTCTGGTGGAGTATTCTGGCGTCTAATGATTGGTACAGTTGTAATGCTAGCAGCTGGCTATATGGGCGAAGCTGGATACATCAACGTAATGTTAGGTTACGTAGTAGGTATAGTCGGTTGGGCATACATCCTTTATGAGATCTTCTTTGGTGGAGCTGGAAAAGTTGCGGCAGAAAAAGCCCCAGCATCGGTACAATCTGCATTCTCAACAATGCGTTGGATCGTAACAATCGGTTGGGCCATATATCCA MVAATVFFLETQRVEGKWKTSLTVSGLVTLVAAVHYFYMRDVWVETGATPLVYRYIDWLITVPLLMVEFYLILRAITAVSGGVFWRLMIGTVVMLAAGYMGEAGYINVMLGYVVGIVGWAYILYEIFFGGAGKVAAEKAPASVQSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTT---TTCTTCTTGGAAACCCAGCGGGTTGAAGGC---AAGTGGAAGACATCGCTGACCGTTTCAGGTCTCGTAACACTAGTTGCAGCAGTACACTACTTTTACATGCGTGACGTGTGGGTC------------------------------GAAACA---------------------GGTGCAACACCGTTAGTATACCGTTACATTGATTGG------------------------CTAATTACAGTGCCACTCTTGATGGTTGAGTTCTACTTAATTCTGCGCGCG---------ATT---ACCGCAGTTTCTGGT---GGAGTA------------------------------------TTCTGGCGT---CTAATGATTGGTACAGTTGTAATGCTAGCAGCTGGCTATATGGGCGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGTA------------------ATGTTAGGT---TACGTAGTAGGTATAGTCGGTTGGGCATACATCCTTTATGAGATC---------------TTC------TTT---GGTGGAGCTGGAAAAGTTGCGGCAGAA------AAA---GCCCCAGCATCGGTA---CAA---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATCGTAACAATC---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATV-FFLETQRVEG-KWKTSLTVSGLVTLVAAVHYFYMRDVWV----------ET-------GATPLVYRYIDW--------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTVVMLAAGYMGE---A------G--Y-----------I----------------------NV------MLG-YVVGIVGWAYILYEI-----F--F-GGAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha4-b]_EU915885 [III-Alpha4-b] US80215_env_samples_EU915885 gi|229358652|gb|EU915885| Uncultured microorganism clone US80215 putative proteorhodopsin gene, partial cds Uncultured microorganism clone US80215 putative proteorhodopsin gene, partial cds EU915885 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_surface_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTCGCCGCTACTGTTTTCTTCTTGGAAACCCAGCGGGTTGAAGGCAAGTGGAAGACATCGCTGACCGTTTCAGGTCTCGTAACACTAGTTGCAGCAGTACACTACTTTTACATGCGTGACGTGTGGGTCGAAACAGGTGCAACGCCGTTAGTATACCGTTACATTGATTGGCTAATTACAGTGCCACTCTTGATGGTTGAGTTCTACTTAATTCTGCGCGCGATAACCGCAGTTTCTGGTGGAGTATTCTGGCGTCTAATGATTGGTACAGTTGTAATGCTAGCAGCTGGCTATATGGGCGAAGCTGGATACATCAACGTAATGTTAGGTTTCGTAGTAGGTATAGTCGGTTGGGCATACATCCTTTATGAGATCTTCTTTGGTGAAGCTGGAAAAGTTGCGGCAGAGAAAGCCCCAGCATCGGTACAATCTGCATTCTCAACAATGCGTTGGATCGTAACAATTGGTTGGGCCATTTAT MLAATVFFLETQRVEGKWKTSLTVSGLVTLVAAVHYFYMRDVWVETGATPLVYRYIDWLITVPLLMVEFYLILRAITAVSGGVFWRLMIGTVVMLAAGYMGEAGYINVMLGFVVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTCGCCGCTACTGTT---TTCTTCTTGGAAACCCAGCGGGTTGAAGGC---AAGTGGAAGACATCGCTGACCGTTTCAGGTCTCGTAACACTAGTTGCAGCAGTACACTACTTTTACATGCGTGACGTGTGGGTC------------------------------GAAACA---------------------GGTGCAACGCCGTTAGTATACCGTTACATTGATTGG------------------------CTAATTACAGTGCCACTCTTGATGGTTGAGTTCTACTTAATTCTGCGCGCG---------ATA---ACCGCAGTTTCTGGT---GGAGTA------------------------------------TTCTGGCGT---CTAATGATTGGTACAGTTGTAATGCTAGCAGCTGGCTATATGGGCGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGTA------------------ATGTTAGGT---TTCGTAGTAGGTATAGTCGGTTGGGCATACATCCTTTATGAGATC---------------TTC------TTT---GGTGAAGCTGGAAAAGTTGCGGCAGAG------AAA---GCCCCAGCATCGGTA---CAA---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCCATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATV-FFLETQRVEG-KWKTSLTVSGLVTLVAAVHYFYMRDVWV----------ET-------GATPLVYRYIDW--------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTVVMLAAGYMGE---A------G--Y-----------I----------------------NV------MLG-FVVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Alpha4-b]_EU915887 [III-Alpha4-b] US80219_env_samples_EU915887 gi|229358656|gb|EU915887| Uncultured microorganism clone US80219 putative proteorhodopsin gene, partial cds Uncultured microorganism clone US80219 putative proteorhodopsin gene, partial cds EU915887 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_surface_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGTGTTCTTCTTCTTGGAAACCCAGCGGGTTGAAGGCAAGTGGAAGACATCGCTGACCGTTTCAGGTCTCGTAACACTAGTTGCAGCAGTACACTACTTTTACATGCGTGACGTGTGGGTCGAAACAGGTGCAACACCGTTAGTATACCGTTACATTGATTGGCTAATTACAGTGCCACTCTTGATGGTTGAGTTCTACTTAATTCTGCGCGCGATTACCGCAGTTTCTGGTGGAGTATTCTGGCGTCTAATGATTGGTACAGTTGTGATGCTAGCAGCTGGCTATATGGGCGAAGCTGGATACATCAACGTAATGTTAGGTTTCGTAGTAGGTATAGTCGGTTGGGCATACATCCTTTATGAGATCTTCTTTGGTGAAGCTGGAAAAGTTGCGGCAGAAAAAGCCCCAGCATCGGTACAATCTGCATTCTCAACAATGCGTTGGATCGTAACAATCGGTTGGGCGATCTAC MVAATVFFFLETQRVEGKWKTSLTVSGLVTLVAAVHYFYMRDVWVETGATPLVYRYIDWLITVPLLMVEFYLILRAITAVSGGVFWRLMIGTVVMLAAGYMGEAGYINVMLGFVVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTGTTCTTCTTCTTGGAAACCCAGCGGGTTGAAGGC---AAGTGGAAGACATCGCTGACCGTTTCAGGTCTCGTAACACTAGTTGCAGCAGTACACTACTTTTACATGCGTGACGTGTGGGTC------------------------------GAAACA---------------------GGTGCAACACCGTTAGTATACCGTTACATTGATTGG------------------------CTAATTACAGTGCCACTCTTGATGGTTGAGTTCTACTTAATTCTGCGCGCG---------ATT---ACCGCAGTTTCTGGT---GGAGTA------------------------------------TTCTGGCGT---CTAATGATTGGTACAGTTGTGATGCTAGCAGCTGGCTATATGGGCGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGTA------------------ATGTTAGGT---TTCGTAGTAGGTATAGTCGGTTGGGCATACATCCTTTATGAGATC---------------TTC------TTT---GGTGAAGCTGGAAAAGTTGCGGCAGAA------AAA---GCCCCAGCATCGGTA---CAA---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATCGTAACAATC---------------------------------------------------------------GGTTGG---------GCGATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLETQRVEG-KWKTSLTVSGLVTLVAAVHYFYMRDVWV----------ET-------GATPLVYRYIDW--------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTVVMLAAGYMGE---A------G--Y-----------I----------------------NV------MLG-FVVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Alpha4-b]_EU915883 [III-Alpha4-b] US080212_env_samples_EU915883 gi|229358648|gb|EU915883| Uncultured microorganism clone US080212 putative proteorhodopsin gene, partial cds Uncultured microorganism clone US080212 putative proteorhodopsin gene, partial cds EU915883 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_surface_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTTGCCGCTACCGTGTTCTTCTTCTTGGAAACCCAGCGGGTTGAAGGCAAGTGGAAGACATCGCTGACCGTTTCAGGTCTCGTAACACTAGTTGCAGCAGTACACTACTTTTACATGCGTGACGTGTGGGTCGAAACAGGTGCAACACCGTTAGTATACCGTTACATTGATTGGCTAATTACAGTGCCACTCTTGATGGTTGAGTTCTACTTAATTCTGCGCGCGATTACCGCAGTTTCTGGTGGAGTATTCTGGCGTCTAATGATTGGTACAGTTGTAATGCTAGCAGCTGGCTATATGGGCGAAGCTGGATACATCAACGTAATGTTAGGTTTCGTAGTAGGTATAGTCGGTTGGGCATACATCCTTTATGAGATCTTCTTTGGTGAAGCTGGAAAAGTTGCGGCAGAAAAAGCCCCAGCATCGGTACAATCTGCATTCTCAACAATGCGTTGGATCGTAACAATCGGGTGGGCCATCTAC MLAATVFFFLETQRVEGKWKTSLTVSGLVTLVAAVHYFYMRDVWVETGATPLVYRYIDWLITVPLLMVEFYLILRAITAVSGGVFWRLMIGTVVMLAAGYMGEAGYINVMLGFVVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACCGTGTTCTTCTTCTTGGAAACCCAGCGGGTTGAAGGC---AAGTGGAAGACATCGCTGACCGTTTCAGGTCTCGTAACACTAGTTGCAGCAGTACACTACTTTTACATGCGTGACGTGTGGGTC------------------------------GAAACA---------------------GGTGCAACACCGTTAGTATACCGTTACATTGATTGG------------------------CTAATTACAGTGCCACTCTTGATGGTTGAGTTCTACTTAATTCTGCGCGCG---------ATT---ACCGCAGTTTCTGGT---GGAGTA------------------------------------TTCTGGCGT---CTAATGATTGGTACAGTTGTAATGCTAGCAGCTGGCTATATGGGCGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGTA------------------ATGTTAGGT---TTCGTAGTAGGTATAGTCGGTTGGGCATACATCCTTTATGAGATC---------------TTC------TTT---GGTGAAGCTGGAAAAGTTGCGGCAGAA------AAA---GCCCCAGCATCGGTA---CAA---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATCGTAACAATC---------------------------------------------------------------GGGTGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFLETQRVEG-KWKTSLTVSGLVTLVAAVHYFYMRDVWV----------ET-------GATPLVYRYIDW--------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTVVMLAAGYMGE---A------G--Y-----------I----------------------NV------MLG-FVVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Alpha4-b]_EU915873 [III-Alpha4-b] US8022_env_samples_EU915873 gi|229358628|gb|EU915873| Uncultured microorganism clone US8022 putative proteorhodopsin gene, partial cds Uncultured microorganism clone US8022 putative proteorhodopsin gene, partial cds EU915873 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_surface_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTTGCCGCTACTGTATTCTTCTTCTTGGAAACCCAGCGGGTTGAAGGCAAGTGGAAGACATCGCTGACCGTTTCAGGTCTCGTAACACTAGTTGCAGCAGTACACTACTTTTACATGCGTGACGTGTGGGTCGAAACAGGTGCAACACCGTTAGTATACCGTTACATTGATTGGCTAATTACAGTGCCACTCTTGATGGTTGAGTTCTACTTAATTCTGCGCGCGATTACCGCAGTTTCTAGTGGAGTATTCTGGCGTCTAATGATTGGTACAGTTGTAATGCTAGCAGCTGGCTATATGGGCGAAGCTGGATACATTAACGTAATGTTAGGTTTCGTAGTAGGTATAGTCGGTTGGGCATACATCCTTTATGAGATCTTCTTTGGTGAAGCTGGAAAAGTTGCGGCAGAAAAAGCCCCAGCATCGGTACAATCTGCATTCTCAACAATGCGTTGGATCGTAACAATTGGATGGGCCATATAC MLAATVFFFLETQRVEGKWKTSLTVSGLVTLVAAVHYFYMRDVWVETGATPLVYRYIDWLITVPLLMVEFYLILRAITAVSSGVFWRLMIGTVVMLAAGYMGEAGYINVMLGFVVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACTGTATTCTTCTTCTTGGAAACCCAGCGGGTTGAAGGC---AAGTGGAAGACATCGCTGACCGTTTCAGGTCTCGTAACACTAGTTGCAGCAGTACACTACTTTTACATGCGTGACGTGTGGGTC------------------------------GAAACA---------------------GGTGCAACACCGTTAGTATACCGTTACATTGATTGG------------------------CTAATTACAGTGCCACTCTTGATGGTTGAGTTCTACTTAATTCTGCGCGCG---------ATT---ACCGCAGTTTCTAGT---GGAGTA------------------------------------TTCTGGCGT---CTAATGATTGGTACAGTTGTAATGCTAGCAGCTGGCTATATGGGCGAA---------GCT------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACGTA------------------ATGTTAGGT---TTCGTAGTAGGTATAGTCGGTTGGGCATACATCCTTTATGAGATC---------------TTC------TTT---GGTGAAGCTGGAAAAGTTGCGGCAGAA------AAA---GCCCCAGCATCGGTA---CAA---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATCGTAACAATT---------------------------------------------------------------GGATGG---------GCCATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFLETQRVEG-KWKTSLTVSGLVTLVAAVHYFYMRDVWV----------ET-------GATPLVYRYIDW--------LITVPLLMVEFYLILRA---I-TAVSS-GV------------FWR-LMIGTVVMLAAGYMGE---A------G--Y-----------I----------------------NV------MLG-FVVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Alpha4-b]_EU915882 [III-Alpha4-b] US080211_env_samples_EU915882 gi|229358646|gb|EU915882| Uncultured microorganism clone US080211 putative proteorhodopsin gene, partial cds Uncultured microorganism clone US080211 putative proteorhodopsin gene, partial cds EU915882 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_surface_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTGGCCGCTACTGCGTTCTTCTTGGAAACCCAGCGGGTTGAAGGCAAGTGGAAGACATCGCTGACCGTTTCAGGTCTCGTAACACTAGTTGCAGCAGTACACTACTTTTACATGCGTGACGTGTGGGTCGAAACAGGTGCAACACCGTTAGTATACCGTTACATTGATTGGCTAATTACAGTGCCACTCTTGATGGTTGAGCTCTACTTAATTCTGCGCGCGATTACCGCAGTTTCTGGTGGAGTATTCTGGCGTCTAATGATTGGTACAGTTGTAATGCTAGCAGCTGGCTATATGGGCGAAGCTGGATACATCAACGTAATGTTAGGTTTCGTAGTAGGTATAGTCGGTTGGGCATACATCCTTTATGAGATCTTCTTTGGTGAAGCTGGAAAAGTTGCGGCAGAAAAAGCCCCAGCATCGGTACAATCTGCATTCTCAACAATGCGTTGGATCGTAACAATCGGGTGGGCAATCTAC MLAATAFFLETQRVEGKWKTSLTVSGLVTLVAAVHYFYMRDVWVETGATPLVYRYIDWLITVPLLMVELYLILRAITAVSGGVFWRLMIGTVVMLAAGYMGEAGYINVMLGFVVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGCG---TTCTTCTTGGAAACCCAGCGGGTTGAAGGC---AAGTGGAAGACATCGCTGACCGTTTCAGGTCTCGTAACACTAGTTGCAGCAGTACACTACTTTTACATGCGTGACGTGTGGGTC------------------------------GAAACA---------------------GGTGCAACACCGTTAGTATACCGTTACATTGATTGG------------------------CTAATTACAGTGCCACTCTTGATGGTTGAGCTCTACTTAATTCTGCGCGCG---------ATT---ACCGCAGTTTCTGGT---GGAGTA------------------------------------TTCTGGCGT---CTAATGATTGGTACAGTTGTAATGCTAGCAGCTGGCTATATGGGCGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGTA------------------ATGTTAGGT---TTCGTAGTAGGTATAGTCGGTTGGGCATACATCCTTTATGAGATC---------------TTC------TTT---GGTGAAGCTGGAAAAGTTGCGGCAGAA------AAA---GCCCCAGCATCGGTA---CAA---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATCGTAACAATC---------------------------------------------------------------GGGTGG---------GCAATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATA-FFLETQRVEG-KWKTSLTVSGLVTLVAAVHYFYMRDVWV----------ET-------GATPLVYRYIDW--------LITVPLLMVELYLILRA---I-TAVSG-GV------------FWR-LMIGTVVMLAAGYMGE---A------G--Y-----------I----------------------NV------MLG-FVVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Alpha4-b]_EU915886 [III-Alpha4-b] US80217_env_samples_EU915886 gi|229358654|gb|EU915886| Uncultured microorganism clone US80217 putative proteorhodopsin gene, partial cds Uncultured microorganism clone US80217 putative proteorhodopsin gene, partial cds EU915886 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_surface_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTAGCCGCTACTGTATTCTTCTTGGAAACCCAGCGGGTTGAAGGCAAGTGGAAGACATCGCTGACCGTTTCAGGTCTCGTAACACTAGTTGCAGCAGTACACTACTTTTACATGCGTGACGTGTGGGTCGAAACAGGTGCAACACCGTTAGTATACCGTTACATTGATTGGCTAATTACAGTGCCACTCTTGATGGTTGAGTTCTACTTAATTCTGCGCGCGATTACCGCAGTTTCTGGTGGAGTATTCTGGCGTCTAATGATTGGTACAGTTGTAATGCTAGCAGCTGGCTATATGGGCGAAGCTGGATACATCAACGTAATGTTAGGTTTCGTAGTAGGTATAGTCGGTTGGGCATACATCCTTTATGAGATCTTCTTTGGTGAAGCTGGAAAAGTTGCGGCAGAAAAAGCCCCAGCATCGGTACAATCTGCATTCTCAACAATGCGTTGGATCGTAACAATCGGTTGGGCTATCTAC MLAATVFFLETQRVEGKWKTSLTVSGLVTLVAAVHYFYMRDVWVETGATPLVYRYIDWLITVPLLMVEFYLILRAITAVSGGVFWRLMIGTVVMLAAGYMGEAGYINVMLGFVVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTAGCCGCTACTGTA---TTCTTCTTGGAAACCCAGCGGGTTGAAGGC---AAGTGGAAGACATCGCTGACCGTTTCAGGTCTCGTAACACTAGTTGCAGCAGTACACTACTTTTACATGCGTGACGTGTGGGTC------------------------------GAAACA---------------------GGTGCAACACCGTTAGTATACCGTTACATTGATTGG------------------------CTAATTACAGTGCCACTCTTGATGGTTGAGTTCTACTTAATTCTGCGCGCG---------ATT---ACCGCAGTTTCTGGT---GGAGTA------------------------------------TTCTGGCGT---CTAATGATTGGTACAGTTGTAATGCTAGCAGCTGGCTATATGGGCGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGTA------------------ATGTTAGGT---TTCGTAGTAGGTATAGTCGGTTGGGCATACATCCTTTATGAGATC---------------TTC------TTT---GGTGAAGCTGGAAAAGTTGCGGCAGAA------AAA---GCCCCAGCATCGGTA---CAA---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATCGTAACAATC---------------------------------------------------------------GGTTGG---------GCTATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATV-FFLETQRVEG-KWKTSLTVSGLVTLVAAVHYFYMRDVWV----------ET-------GATPLVYRYIDW--------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTVVMLAAGYMGE---A------G--Y-----------I----------------------NV------MLG-FVVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Alpha4-b]_EU916074 [III-Alpha4-b] clone_A150006_EU916074 gi|229359029|gb|EU916074| Uncultured bacterium clone A150006 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A150006 putative proteorhodopsin gene, partial cds. EU916074 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTTGCCGCTACTGTTTTCTTCTTCCTGGAAACCCAGCGGGTCGAAGGCAAGTGGAAGACATCGCTGACCGTTTCAGGTCTCGTAACATTAGTTGCAGCAGTACACTACTTTTACATGCGTGACGTGTGGGTCGGTGCAACACCGTTAGTATACCGTTATATTGATTGGCTAATTACAGTGCCACTCTTGATGGTTGAGTTCTACTTAATTCTGCGCGCGATTGCAGTTTCTGGTGGAGTATTCTGGCGTCTAATGATTGGTACAGTTGTAATGCTAGCAGCTGGCTATATGGGCGAAGCTGGATACATCAACGTAATGTTAGGTTTCGTAGTAGGTATAGTCGGTTGGGCATACATCCTTTATGAGATCTTCTTTGGTGAAGCTGGAAAAGTTGCGGCAGAAAAAGCCCCAGCATCGGTACAATCTGCATTCTCAACAATGCGTTGGATCGTAACAATCGGGTGGGCGATTTAC MVAATVFFFLETQRVEGKWKTSLTVSGLVTLVAAVHYFYMRDVWVGATPLVYRYIDWLITVPLLMVEFYLILRAIAVSGGVFWRLMIGTVVMLAAGYMGEAGYINVMLGFVVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTTTTCTTCTTCCTGGAAACCCAGCGGGTCGAAGGC---AAGTGGAAGACATCGCTGACCGTTTCAGGTCTCGTAACATTAGTTGCAGCAGTACACTACTTTTACATGCGTGACGTGTGGGTC---------------------------------------------------------GGTGCAACACCGTTAGTATACCGTTATATTGATTGG------------------------CTAATTACAGTGCCACTCTTGATGGTTGAGTTCTACTTAATTCTGCGCGCG---------ATT------GCAGTTTCTGGT---GGAGTA------------------------------------TTCTGGCGT---CTAATGATTGGTACAGTTGTAATGCTAGCAGCTGGCTATATGGGCGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGTA------------------ATGTTAGGT---TTCGTAGTAGGTATAGTCGGTTGGGCATACATCCTTTATGAGATC---------------TTC------TTT---GGTGAAGCTGGAAAAGTTGCGGCAGAA------AAA---GCCCCAGCATCGGTA---CAA---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATCGTAACAATC---------------------------------------------------------------GGGTGG---------GCGATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLETQRVEG-KWKTSLTVSGLVTLVAAVHYFYMRDVWV-------------------GATPLVYRYIDW--------LITVPLLMVEFYLILRA---I--AVSG-GV------------FWR-LMIGTVVMLAAGYMGE---A------G--Y-----------I----------------------NV------MLG-FVVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Alpha4-b]_EU916079 [III-Alpha4-b] clone_A150012_EU916079 gi|229359039|gb|EU916079| Uncultured bacterium clone A150012 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A150012 putative proteorhodopsin gene, partial cds. EU916079 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGTGTTCTTCTTCTTGGAGACCCAGCGGGTTGAAGGCAAGTGGAAGACATCGCTGACCGTTTCAGGTCTCGTAACATTAGTTGCAGCAGTACACTACTTTTACATGCGTGACGTCTGGGTCGGTGCAACACCGTTAGTATACCGTTACATTGATTGGCTAATTACAGTGCCACTCTTGATGGTTGAGTTCTACTTAATTCTGCGCGCGATTGCAGTTTCTGGTGGCGTATTCTGGCGTCTAATGATTGGTACAGTTGTAATGCTAGCAGCTGGCTATATGGGCGAAGCTGGATACATCAACGTAATGTTAGGTTTCGTGGTAGGTATAGTCGGTTGGGCATACATTCTTTATGAGATCTTCTTTGGTGAAGCTGGAAAAGTTGCGGCAGAAAAAGCCCCAGCATCGGTACAATCTGCATTCTCAACAATGCGTTGGATCGTAACAATTGGTTGGGCAATATAC MVAATVFFFLETQRVEGKWKTSLTVSGLVTLVAAVHYFYMRDVWVGATPLVYRYIDWLITVPLLMVEFYLILRAIAVSGGVFWRLMIGTVVMLAAGYMGEAGYINVMLGFVVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTGTTCTTCTTCTTGGAGACCCAGCGGGTTGAAGGC---AAGTGGAAGACATCGCTGACCGTTTCAGGTCTCGTAACATTAGTTGCAGCAGTACACTACTTTTACATGCGTGACGTCTGGGTC---------------------------------------------------------GGTGCAACACCGTTAGTATACCGTTACATTGATTGG------------------------CTAATTACAGTGCCACTCTTGATGGTTGAGTTCTACTTAATTCTGCGCGCG---------ATT------GCAGTTTCTGGT---GGCGTA------------------------------------TTCTGGCGT---CTAATGATTGGTACAGTTGTAATGCTAGCAGCTGGCTATATGGGCGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGTA------------------ATGTTAGGT---TTCGTGGTAGGTATAGTCGGTTGGGCATACATTCTTTATGAGATC---------------TTC------TTT---GGTGAAGCTGGAAAAGTTGCGGCAGAA------AAA---GCCCCAGCATCGGTA---CAA---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCAATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLETQRVEG-KWKTSLTVSGLVTLVAAVHYFYMRDVWV-------------------GATPLVYRYIDW--------LITVPLLMVEFYLILRA---I--AVSG-GV------------FWR-LMIGTVVMLAAGYMGE---A------G--Y-----------I----------------------NV------MLG-FVVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Alpha4-b]_EU915877 [III-Alpha4-b] US80206_env_samples_EU915877 gi|229358636|gb|EU915877| Uncultured organism clone US80206 putative proteorhodopsin gene, partial cds Uncultured organism clone US80206 putative proteorhodopsin gene, partial cds EU915877 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump G97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 31-DEC-2009 #na ocean_surface_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTCGCCGCTACTGTATTCTTCTTAGAAACCCAGCGGGTTGAAGGTAAATGGAAGACTTCTTTAACCGTTTCAGGTCTTGTGACACTCGTAGCAGCAGTTCATTACTTCTACATGCGTGATGTCTGGGTTGAAACAGGTGCAACACCATTAGTTTACCGTTATATCGGTTGGTTAATCACAGTGCCACTGTTGATGGTGGAGTTCTATCTTATACTTCGCGCTATCACAGCAGTATCTGGCGGCGTGTTCTGGCGTCTGATGGTCGGCACAGTAGTAATGCTGGCAGCGGGCTATATGGGCGAAGCAGGCTATATCAATCCGATGTTAGGTTTTGTTGTCGGTATAGTTGGATGGGCATATATTTTATATGAGATCTTCTTTGGTGAAGCCGGACAGGTCGCATCGGAAAAAGCTCCAGCTTCTGTACAGTCAGCCTTTTCAACTATGCGTTGGATTGTGACAATTGGATGGGCGATATAT MLAATVFFLETQRVEGKWKTSLTVSGLVTLVAAVHYFYMRDVWVETGATPLVYRYIGWLITVPLLMVEFYLILRAITAVSGGVFWRLMVGTVVMLAAGYMGEAGYINPMLGFVVGIVGWAYILYEIFFGEAGQVASEKAPASVQSAFSTMRWIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTCGCCGCTACTGTA---TTCTTCTTAGAAACCCAGCGGGTTGAAGGT---AAATGGAAGACTTCTTTAACCGTTTCAGGTCTTGTGACACTCGTAGCAGCAGTTCATTACTTCTACATGCGTGATGTCTGGGTT------------------------------GAAACA---------------------GGTGCAACACCATTAGTTTACCGTTATATCGGTTGG------------------------TTAATCACAGTGCCACTGTTGATGGTGGAGTTCTATCTTATACTTCGCGCT---------ATC---ACAGCAGTATCTGGC---GGCGTG------------------------------------TTCTGGCGT---CTGATGGTCGGCACAGTAGTAATGCTGGCAGCGGGCTATATGGGCGAA---------GCA------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AATCCG------------------ATGTTAGGT---TTTGTTGTCGGTATAGTTGGATGGGCATATATTTTATATGAGATC---------------TTC------TTT---GGTGAAGCCGGACAGGTCGCATCGGAA------AAA---GCTCCAGCTTCTGTA---CAG---TCA---GCC---TTT---TCA---ACTATG---CGTTGGATTGTGACAATT---------------------------------------------------------------GGATGG---------GCGATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATV-FFLETQRVEG-KWKTSLTVSGLVTLVAAVHYFYMRDVWV----------ET-------GATPLVYRYIGW--------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMVGTVVMLAAGYMGE---A------G--Y-----------I----------------------NP------MLG-FVVGIVGWAYILYEI-----F--F-GEAGQVASE--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Alpha4-b]_EU915874 [III-Alpha4-b] US80203_env_samples_EU915874 gi|229358630|gb|EU915874| Uncultured microorganism clone US80203 putative proteorhodopsin gene, partial cds Uncultured microorganism clone US80203 putative proteorhodopsin gene, partial cds EU915874 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_surface_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTTGCCGCTACTGTGTTCTTCTTTTTAGAAACCCAGCGGGTTGAAGGTAAATGGAAGACTTCTTTAACCGTTTCAGGTCTTGTGACACTCGTAGCAGCAGTTCATTACTTCTACATGCGTGATGTCTGGGTTGAAACAGGTGCAACACCATTAGTTTATCGTTATATCGATTGGTTAATCACAGTGCCACTGTTGATGGTGGAGTTCTATCTTATACTTCGCGCTATCACAGCAGTATCTGGCGGCGTGTTCTGGCGTCTGATGGTCGGCACAGTGGTAATGCTGGCAGTGGGCTATATGGGCGAAGCAGGCTATATCAATCCGATGTTAGGTTTTGTTGTCGGTATAGTTGGATGGGCTTATATTTTATATGAGATCTTCTTTGGTGAAGCCGGGCAGGTCGCATCGGAAAAAGCTCCAGCTTCTGTACAGTCAGCCTTTTCAACTATGCGTTGGATTGTGACAATTGGTTGGGCCATCTAC MLAATVFFFLETQRVEGKWKTSLTVSGLVTLVAAVHYFYMRDVWVETGATPLVYRYIDWLITVPLLMVEFYLILRAITAVSGGVFWRLMVGTVVMLAVGYMGEAGYINPMLGFVVGIVGWAYILYEIFFGEAGQVASEKAPASVQSAFSTMRWIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACTGTGTTCTTCTTTTTAGAAACCCAGCGGGTTGAAGGT---AAATGGAAGACTTCTTTAACCGTTTCAGGTCTTGTGACACTCGTAGCAGCAGTTCATTACTTCTACATGCGTGATGTCTGGGTT------------------------------GAAACA---------------------GGTGCAACACCATTAGTTTATCGTTATATCGATTGG------------------------TTAATCACAGTGCCACTGTTGATGGTGGAGTTCTATCTTATACTTCGCGCT---------ATC---ACAGCAGTATCTGGC---GGCGTG------------------------------------TTCTGGCGT---CTGATGGTCGGCACAGTGGTAATGCTGGCAGTGGGCTATATGGGCGAA---------GCA------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AATCCG------------------ATGTTAGGT---TTTGTTGTCGGTATAGTTGGATGGGCTTATATTTTATATGAGATC---------------TTC------TTT---GGTGAAGCCGGGCAGGTCGCATCGGAA------AAA---GCTCCAGCTTCTGTA---CAG---TCA---GCC---TTT---TCA---ACTATG---CGTTGGATTGTGACAATT---------------------------------------------------------------GGTTGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFLETQRVEG-KWKTSLTVSGLVTLVAAVHYFYMRDVWV----------ET-------GATPLVYRYIDW--------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMVGTVVMLAVGYMGE---A------G--Y-----------I----------------------NP------MLG-FVVGIVGWAYILYEI-----F--F-GEAGQVASE--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC10A01]_JX863139 [III-Alpha4-ARCTIC10A01] MALINA_OTU03d_299_L_env_samples_JX863139 gi|425477228|gb|JX863139| Uncultured bacterium clone MALINA OTU03d 299 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU03d 299 L putative proteorhodopsin gene, partial cds JX863139 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC10A01-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC10A01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 11-juil-09 0m_depth Arctic Ocean marine 67.49 -168.12 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTAATCACGGTTCCACTCTTGATGGTAGAATTTTACCTTATCTTGCGGGCAATCACAAATGTTTCTGGTGGAATTTTCTGGCGCTTGATGATCGGTACGATGGTAATGTTGGTCGGCGGCTACATGGGCGAAGCTGGTTACATAAATGCAATGTTGGGATTTATCGTCGGTATGGCCGGCTGGGCATACATCCTATATGAAATTTTCTTTGGTGAAGCAGGGAAAGTTGCAGCTGAAAAAGCTCCTCCATCAGTGCAATCTGCTTTTGTAACAATGCGTTGGATCGTGACCATC WLITVPLLMVEFYLILRAITNVSGGIFWRLMIGTMVMLVGGYMGEAGYINAMLGFIVGMAGWAYILYEIFFGEAGKVAAEKAPPSVQSAFVTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTAATCACGGTTCCACTCTTGATGGTAGAATTTTACCTTATCTTGCGGGCA---------ATC---ACAAATGTTTCTGGT---GGAATT------------------------------------TTCTGGCGC---TTGATGATCGGTACGATGGTAATGTTGGTCGGCGGCTACATGGGCGAA---------GCT------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGCA------------------ATGTTGGGA---TTTATCGTCGGTATGGCCGGCTGGGCATACATCCTATATGAAATT---------------TTC------TTT---GGTGAAGCAGGGAAAGTTGCAGCTGAA------AAA---GCTCCTCCATCAGTG---CAA---TCT---GCT---TTT---GTA---ACAATG---CGTTGGATCGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGTMVMLVGGYMGE---A------G--Y-----------I----------------------NA------MLG-FIVGMAGWAYILYEI-----F--F-GEAGKVAAE--K-APPSV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC10A01]_JX863138 [III-Alpha4-ARCTIC10A01] MALINA_OTU03d_109_L_env_samples_JX863138 gi|425477226|gb|JX863138| Uncultured bacterium clone MALINA OTU03d 109 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU03d 109 L putative proteorhodopsin gene, partial cds JX863138 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC10A01-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC10A01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 08Aug2009 3m_depth Arctic Ocean marine 70.8 -133.73 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGATCACGGTTCCACTCTTGATGGTAGAATTTTATCTCATATTGCGTGCAGTCACAAATGTTTCTGGCGGAATTTTCTGGCGCTTGATGATCGGTACGATGGTAATGTTGGTCGGCGGCTACATGGGCGAAGCTGGTTACATAAATGCAATGTTGGGATTTATCGTCGGTATGGTCGGCTGGGCCTACATCCTATATGAAATCTTCTTTGGTGAAGCAGGGAAAGTTGCAGCTGAAAAAGCTCCTCCATCGGTGCAATCTGCTTTCGTAACGATGCGTTGGATCGTGACCATC WLITVPLLMVEFYLILRAVTNVSGGIFWRLMIGTMVMLVGGYMGEAGYINAMLGFIVGMVGWAYILYEIFFGEAGKVAAEKAPPSVQSAFVTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATCACGGTTCCACTCTTGATGGTAGAATTTTATCTCATATTGCGTGCA---------GTC---ACAAATGTTTCTGGC---GGAATT------------------------------------TTCTGGCGC---TTGATGATCGGTACGATGGTAATGTTGGTCGGCGGCTACATGGGCGAA---------GCT------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGCA------------------ATGTTGGGA---TTTATCGTCGGTATGGTCGGCTGGGCCTACATCCTATATGAAATC---------------TTC------TTT---GGTGAAGCAGGGAAAGTTGCAGCTGAA------AAA---GCTCCTCCATCGGTG---CAA---TCT---GCT---TTC---GTA---ACGATG---CGTTGGATCGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYLILRA---V-TNVSG-GI------------FWR-LMIGTMVMLVGGYMGE---A------G--Y-----------I----------------------NA------MLG-FIVGMVGWAYILYEI-----F--F-GEAGKVAAE--K-APPSV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC10A01]_JX863235 [III-Alpha4-ARCTIC10A01] MALINA_OTU03d_113_L_env_samples_JX863235 gi|425477420|gb|JX863235| Uncultured bacterium clone MALINA OTU03d 113 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU03d 113 L putative proteorhodopsin mRNA, partial cds JX863235 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC10A01-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC10A01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 09Aug2009 3m_depth Arctic Ocean marine 71.57 -133.94 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGATCACGGTTCCACTCTTGATGGTAGAATTTTATCTTATCTTGCGTGCAATCACAAATGTTTCTGGCGGAATTTTCTGGCGCTTGATGATTGGTACGATGGTAATGTTGGTCGGCGGCTATCTGGGCGAAGCAGGTTACATAAATGCAATGTTTGGATTTATCGTCGGTATGGTTGGCTGGGCCTACATCCTATATGAAATCTTCTTCGGAGAAGCAGGGAAAGTTGCGGCTGAAAAAGCTCCACCATCGGTGCAATCTGCTTTCGTAACAATGCGTTGGATCGTGACCATC WLITVPLLMVEFYLILRAITNVSGGIFWRLMIGTMVMLVGGYLGEAGYINAMFGFIVGMVGWAYILYEIFFGEAGKVAAEKAPPSVQSAFVTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATCACGGTTCCACTCTTGATGGTAGAATTTTATCTTATCTTGCGTGCA---------ATC---ACAAATGTTTCTGGC---GGAATT------------------------------------TTCTGGCGC---TTGATGATTGGTACGATGGTAATGTTGGTCGGCGGCTATCTGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGCA------------------ATGTTTGGA---TTTATCGTCGGTATGGTTGGCTGGGCCTACATCCTATATGAAATC---------------TTC------TTC---GGAGAAGCAGGGAAAGTTGCGGCTGAA------AAA---GCTCCACCATCGGTG---CAA---TCT---GCT---TTC---GTA---ACAATG---CGTTGGATCGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGTMVMLVGGYLGE---A------G--Y-----------I----------------------NA------MFG-FIVGMVGWAYILYEI-----F--F-GEAGKVAAE--K-APPSV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC10A01]_EU795233 [III-Alpha4-ARCTIC10A01] ARCTIC10_A_1_genomic_EU795233 gi|193084447|gb|EU795233| Uncultured bacterium ARCTIC10 A 01 genomic sequence Uncultured bacterium ARCTIC10 A 01 genomic sequence EU795233 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC10A01-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC10A01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:542396 genomic_DNA other 02-juil-08 #na Arctic Arctic Ocean marine 71.4 -156.8 Direct Submission Henn,M.R., Young,S., Jaffe,D.B., Gnerre,S., Berlin,A., Heiman,D., Hepburn,T., Sykes,S., Kirchman,D.L., Cottrell,M.T., Lander,E., Nusbaum,C. and Birren,B. Submitted (21MAY2008) Broad Institute of MIT and Harvard, 320 Charles Street, Cambridge, MA 02141, USA #na #na ATGAGAAACATCTATAGTAAAATAAAAATTATGATGGCTACAGTGGGATTAATCGCTGCACCGTCCTTAGCCTCGGCAAGTGCCAATCTAGCGGCAGATGATTTTGTCGGTATTTCGTTCTGGTTAATATCGATGGCTTTGGTTGCCGCAACAGCATTCTTCTTCATGGAAACTCAACGTGTTTCAGGTAAGTGGAAAACATCGCTCACAGTTTCAGGTTTGGTAACATTGGTAGCAGCAGTTCACTATTTCTACATGCGCGACGTTTGGGTGGCGACTGGAGAAACTCCACTAGTCTACCGTTACATTGACTGGCTGATCACGGTTCCACTCTTGATGGTAGAATTTTATCTTATCTTGCGTGCAATCACAAATGTTTCTGGCGGAATTTTCTGGCGCTTGATGATTGGTACGATGGTAATGTTGGTCGGCGGCTATCTGGGCGAAGCAGGTTACATAAATGCAATGTTTGGATTTATCGTCGGTATGGTTGGCTGGGCCTACATCCTATATGAAATCTTCTTTGGAGAAGCAGGGAAAGTTGCGGCTGAAAAAGCTCCACCATCGGTGCAATCTGCTTTCGTAACAATGCGTTGGATCGTGACCATCGGTTGGGCAATTTACCCAATTGGCTATTTCATGGGCTACTTCACAGGCGCAGGCCCTGAAGAAGCATCAAACGCTTTAAATATTATCTACAACCTTGCGGATGTTGTGAATAAGATCGCGTTTGGCGTAATCATCTGGAACGTTGCCGTTACAGAGTCTGAAAAAACGTCC MRNIYSKIKIMMATVGLIAAPSLASASANLAADDFVGISFWLISMALVAATAFFFMETQRVSGKWKTSLTVSGLVTLVAAVHYFYMRDVWVATGETPLVYRYIDWLITVPLLMVEFYLILRAITNVSGGIFWRLMIGTMVMLVGGYLGEAGYINAMFGFIVGMVGWAYILYEIFFGEAGKVAAEKAPPSVQSAFVTMRWIVTIGWAIYPIGYFMGYFTGAGPEEASNALNIIYNLADVVNKIAFGVIIWNVAVTESEKTS ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAGAAACATCTATAGTAAAATAAAAATTATGATGGCTACAGTGGGATTAATCGCTGCACCGTCCTTAGCCTCGGCAAGTGCCAATCTAGCGGCAGATGATTTTGTCGGTATTTCGTTCTGGTTAATATCGATGGCTTTGGTTGCCGCAACAGCATTCTTCTTCATGGAAACTCAACGTGTTTCAGGT---AAGTGGAAAACATCGCTCACAGTTTCAGGTTTGGTAACATTGGTAGCAGCAGTTCACTATTTCTACATGCGCGACGTTTGGGTG------------------------------GCGACT---------------------GGAGAAACTCCACTAGTCTACCGTTACATTGACTGG------------------------CTGATCACGGTTCCACTCTTGATGGTAGAATTTTATCTTATCTTGCGTGCA---------ATC---ACAAATGTTTCTGGC---GGAATT------------------------------------TTCTGGCGC---TTGATGATTGGTACGATGGTAATGTTGGTCGGCGGCTATCTGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGCA------------------ATGTTTGGA---TTTATCGTCGGTATGGTTGGCTGGGCCTACATCCTATATGAAATC---------------TTC------TTT---GGAGAAGCAGGGAAAGTTGCGGCTGAA------AAA---GCTCCACCATCGGTG---CAA---TCT---GCT---TTC---GTA---ACAATG---CGTTGGATCGTGACCATC---------------------------------------------------------------GGTTGG---------GCAATTTACCCAATTGGCTATTTCATGGGCTACTTCACA------------------------------GGCGCAGGCCCTGAAGAAGCATCAAACGCTTTAAATATTATCTACAACCTTGCGGATGTTGTGAATAAGATCGCGTTTGGCGTAATCATCTGGAACGTTGCCGTTACAGAG---TCTGAAAAAACGTCC------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------MRNIYSKIKIMMATVGLIAAPSLASASANLAADDFVGISFWLISMALVAATAFFFMETQRVSG-KWKTSLTVSGLVTLVAAVHYFYMRDVWV----------AT-------GETPLVYRYIDW--------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGTMVMLVGGYLGE---A------G--Y-----------I----------------------NA------MFG-FIVGMVGWAYILYEI-----F--F-GEAGKVAAE--K-APPSV-Q-S-A-F-V-TM-RWIVTI---------------------GW---AIYPIGYFMGYFT----------GAGPEEASNALNIIYNLADVVNKIAFGVIIWNVAVTE-SEKTS------------------------------------ [III-Alpha4-ARCTIC10A01]_JX863234 [III-Alpha4-ARCTIC10A01] MALINA_OTU03d_108_L_env_samples_JX863234 gi|425477418|gb|JX863234| Uncultured bacterium clone MALINA OTU03d 108 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU03d 108 L putative proteorhodopsin mRNA, partial cds JX863234 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC10A01-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC10A01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 09Aug2009 3m_depth Arctic Ocean marine 71.57 -133.94 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGATCACGGTGCCACTCTTGATGGTAGAATTTTATCCTATCTTGCGTGCAATCACATATGTTTCTGGCGGAATTTTCTGGCGCTTGATGATTGGTACGATGGTAATGTTGGTTGGCGGCTATATGGGCGAAGCAGGTTACATAAATGCAATGTTTGGATTTATCGTCGGTATGGTTGGCTGGGCGTACATCCTATATGAAATCTTCTTTGGAGAAGCAGGGAAGGTTGCGGCTGAAAAAGCTCCACCATCGGTGCAATCTGCTTTCGTAACAATGCGTTGGATCGTGACCATC WLITVPLLMVEFYPILRAITYVSGGIFWRLMIGTMVMLVGGYMGEAGYINAMFGFIVGMVGWAYILYEIFFGEAGKVAAEKAPPSVQSAFVTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATCACGGTGCCACTCTTGATGGTAGAATTTTATCCTATCTTGCGTGCA---------ATC---ACATATGTTTCTGGC---GGAATT------------------------------------TTCTGGCGC---TTGATGATTGGTACGATGGTAATGTTGGTTGGCGGCTATATGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGCA------------------ATGTTTGGA---TTTATCGTCGGTATGGTTGGCTGGGCGTACATCCTATATGAAATC---------------TTC------TTT---GGAGAAGCAGGGAAGGTTGCGGCTGAA------AAA---GCTCCACCATCGGTG---CAA---TCT---GCT---TTC---GTA---ACAATG---CGTTGGATCGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYPILRA---I-TYVSG-GI------------FWR-LMIGTMVMLVGGYMGE---A------G--Y-----------I----------------------NA------MFG-FIVGMVGWAYILYEI-----F--F-GEAGKVAAE--K-APPSV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC10A01]_JX863237 [III-Alpha4-ARCTIC10A01] MALINA_OTU03d_183_L_env_samples_JX863237 gi|425477424|gb|JX863237| Uncultured bacterium clone MALINA OTU03d 183 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU03d 183 L putative proteorhodopsin mRNA, partial cds JX863237 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC10A01-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC10A01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 08Aug2009 3m_depth Arctic Ocean marine 70.8 -133.73 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGATCACGGTGCCACTCTTGATGGTAGAATTTTATCTTATCTTGCGTGCAATCACAAATGTTTCTGGCGGAATTTTCTGGCGCTTGATGATTGGTACGATGGTAATGTTGGTTGGCGGCTATATGGGCGAAGCAGGTTACGTAAATGCAATGTTTGGATTTATCGTCGGTATGGTTGGCTGGGCGTACATCCTATATGAAATCTTCTTTGGAGAAGCAGGGAAAGTTGCGGCTGAAAAAGCTCCACCATCGGTGCAATCTGCTTTCGTAACAATGCGTTGGATCGTGACCATC WLITVPLLMVEFYLILRAITNVSGGIFWRLMIGTMVMLVGGYMGEAGYVNAMFGFIVGMVGWAYILYEIFFGEAGKVAAEKAPPSVQSAFVTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATCACGGTGCCACTCTTGATGGTAGAATTTTATCTTATCTTGCGTGCA---------ATC---ACAAATGTTTCTGGC---GGAATT------------------------------------TTCTGGCGC---TTGATGATTGGTACGATGGTAATGTTGGTTGGCGGCTATATGGGCGAA---------GCA------------------GGT------TAC---------------------------------GTA------------------------------------------------------------------AATGCA------------------ATGTTTGGA---TTTATCGTCGGTATGGTTGGCTGGGCGTACATCCTATATGAAATC---------------TTC------TTT---GGAGAAGCAGGGAAAGTTGCGGCTGAA------AAA---GCTCCACCATCGGTG---CAA---TCT---GCT---TTC---GTA---ACAATG---CGTTGGATCGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGTMVMLVGGYMGE---A------G--Y-----------V----------------------NA------MFG-FIVGMVGWAYILYEI-----F--F-GEAGKVAAE--K-APPSV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC10A01]_JX863140 [III-Alpha4-ARCTIC10A01] MALINA_OTU03d_413_L_env_samples_JX863140 gi|425477230|gb|JX863140| Uncultured bacterium clone MALINA OTU03d 413 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU03d 413 L putative proteorhodopsin gene, partial cds JX863140 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC10A01-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC10A01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 16Aug2009 0m_depth Arctic Ocean marine 69.51 -133.42 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGATCACGGTTCCACTCTTAATGGTAGAATTTTATCTTATCTTGCGTGCAATCACAAATGTTTCTGGCGGAATTTTCTGGCGCTTGATGATCGGTACGATGGTAATGTTGGTCGGCGGCTATATGGGCGAAGCCGGTTACATAAATGCAATGTTTGGATTTATCGTCGGCATGGTCGGCTGGGCCTACATCCTATATGAAATCTTTTTTGGAGAAGCAGGGAAAGTTGCAGCTGAAAAAGCTCCTCCATCGGTGCAATCTGCCTTCGTAACAATGCGTTGGATCGTGACCATC WLITVPLLMVEFYLILRAITNVSGGIFWRLMIGTMVMLVGGYMGEAGYINAMFGFIVGMVGWAYILYEIFFGEAGKVAAEKAPPSVQSAFVTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATCACGGTTCCACTCTTAATGGTAGAATTTTATCTTATCTTGCGTGCA---------ATC---ACAAATGTTTCTGGC---GGAATT------------------------------------TTCTGGCGC---TTGATGATCGGTACGATGGTAATGTTGGTCGGCGGCTATATGGGCGAA---------GCC------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGCA------------------ATGTTTGGA---TTTATCGTCGGCATGGTCGGCTGGGCCTACATCCTATATGAAATC---------------TTT------TTT---GGAGAAGCAGGGAAAGTTGCAGCTGAA------AAA---GCTCCTCCATCGGTG---CAA---TCT---GCC---TTC---GTA---ACAATG---CGTTGGATCGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGTMVMLVGGYMGE---A------G--Y-----------I----------------------NA------MFG-FIVGMVGWAYILYEI-----F--F-GEAGKVAAE--K-APPSV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC10A01]_FJ618988 [III-Alpha4-ARCTIC10A01] PR_707_07_24_env_samples_FJ618988 gi|223046859|gb|FJ618988| Uncultured bacterium clone PR 707 07 24 proteorhodopsin gene, partial cds Uncultured bacterium clone PR 707 07 24 proteorhodopsin gene, partial cds FJ618988 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC10A01-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC10A01-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-juil-09 #na Arctic_Ocean Arctic Ocean marine 71.37 -156.68 Photoheterotrophic microbes in the Arctic Ocean in summer and winter Cottrell,M.T. and Kirchman,D.L. Appl. Environ. Microbiol. 75 (15), 49584966 (2009) 19502441 #na TATATAGATTGGCTGACCACGGTTCCACTCTTGATGGTAGAATTTTATCTTATCTTGCGTGCAATCACAAATGTTTCTGGCGGAATTTTCTGGCGCTTAATGATCGGTACGATGGTAATGTTGGTCGGCGGCTATATGGGCGAAGCCGGTTACATAAATGCAATGTTTGGATTTATCGTCGGTATGGTCGGCTGGGCCTACATCCTATATGAAATCTTCTTTGGAGAAGCAGGGAAAGTTGCAGCTGAAAAAGCTCCTCCATCGGTGCAATCGGCCTTCGTAACAATGCGTTGGATCGTGACCATCGGGTGGGCAATATAC YIDWLTTVPLLMVEFYLILRAITNVSGGIFWRLMIGTMVMLVGGYMGEAGYINAMFGFIVGMVGWAYILYEIFFGEAGKVAAEKAPPSVQSAFVTMRWIVTIGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATAGATTGG------------------------CTGACCACGGTTCCACTCTTGATGGTAGAATTTTATCTTATCTTGCGTGCA---------ATC---ACAAATGTTTCTGGC---GGAATT------------------------------------TTCTGGCGC---TTAATGATCGGTACGATGGTAATGTTGGTCGGCGGCTATATGGGCGAA---------GCC------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGCA------------------ATGTTTGGA---TTTATCGTCGGTATGGTCGGCTGGGCCTACATCCTATATGAAATC---------------TTC------TTT---GGAGAAGCAGGGAAAGTTGCAGCTGAA------AAA---GCTCCTCCATCGGTG---CAA---TCG---GCC---TTC---GTA---ACAATG---CGTTGGATCGTGACCATC---------------------------------------------------------------GGGTGG---------GCAATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YIDW--------LTTVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGTMVMLVGGYMGE---A------G--Y-----------I----------------------NA------MFG-FIVGMVGWAYILYEI-----F--F-GEAGKVAAE--K-APPSV-Q-S-A-F-V-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC10A01]_JX863236 [III-Alpha4-ARCTIC10A01] MALINA_OTU03d_179_L_env_samples_JX863236 gi|425477422|gb|JX863236| Uncultured bacterium clone MALINA OTU03d 179 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU03d 179 L putative proteorhodopsin mRNA, partial cds JX863236 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC10A01-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC10A01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 08Aug2009 3m_depth Arctic Ocean marine 70.8 -133.73 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGATCACGGTTCCACTCTTGATGGTAGAATTTTATCTTATCTTGCGTGCAATCACAAATGTTTCTGGCGGAATTTTCTGGCGCTTGATGATCGGTACGATGGTAATGTTGGTCGGCGGCTATGTGGGCGAAGCCGGTTACATAAATGCAATGTTTGGATTTATCGTCGGTATGGTCGGCTGGGCCTACATCCTATATGAAATCTTCTTTGGAGAAGCAGGGAAAGTTGCAGCTGAAAAAGCTCCTCCATCGGTGCAATCGGCCTTCGTAACAATGCGTTGGATCGTTACCATC WLITVPLLMVEFYLILRAITNVSGGIFWRLMIGTMVMLVGGYVGEAGYINAMFGFIVGMVGWAYILYEIFFGEAGKVAAEKAPPSVQSAFVTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATCACGGTTCCACTCTTGATGGTAGAATTTTATCTTATCTTGCGTGCA---------ATC---ACAAATGTTTCTGGC---GGAATT------------------------------------TTCTGGCGC---TTGATGATCGGTACGATGGTAATGTTGGTCGGCGGCTATGTGGGCGAA---------GCC------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGCA------------------ATGTTTGGA---TTTATCGTCGGTATGGTCGGCTGGGCCTACATCCTATATGAAATC---------------TTC------TTT---GGAGAAGCAGGGAAAGTTGCAGCTGAA------AAA---GCTCCTCCATCGGTG---CAA---TCG---GCC---TTC---GTA---ACAATG---CGTTGGATCGTTACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGTMVMLVGGYVGE---A------G--Y-----------I----------------------NA------MFG-FIVGMVGWAYILYEI-----F--F-GEAGKVAAE--K-APPSV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC10A01]_JX863137 [III-Alpha4-ARCTIC10A01] MALINA_OTU03d_045_L_env_samples_JX863137 gi|425477224|gb|JX863137| Uncultured bacterium clone MALINA OTU03d 045 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU03d 045 L putative proteorhodopsin gene, partial cds JX863137 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC10A01-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC10A01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 07Aug2009 5m_depth Arctic Ocean marine 70.91 -128.92 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGATCGCGGTTCCACTCTTGATGGTAGAATTTTATCTTATCTTGCGTGCAATCACAAATGTTTCTGGCGGAATTTTCTGGCGCTTGATGATCGGTACGATGGTAATGTTGGTCGGCGGCTATATGGGCGAAGCCGGTTACATAAATGCAATGTTTGGATTTATCGTCGGTATGGTCGGCTGGGCCTACATCCTATATGAAATCTTCTTTGGAGAAGCAGGGAAAGTTGCAGCTGAAAAAGCTCCTCCATCGGTGCAATCGGCCTTCGTAACAATGCGTTGGATCGTGACCATC WLIAVPLLMVEFYLILRAITNVSGGIFWRLMIGTMVMLVGGYMGEAGYINAMFGFIVGMVGWAYILYEIFFGEAGKVAAEKAPPSVQSAFVTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATCGCGGTTCCACTCTTGATGGTAGAATTTTATCTTATCTTGCGTGCA---------ATC---ACAAATGTTTCTGGC---GGAATT------------------------------------TTCTGGCGC---TTGATGATCGGTACGATGGTAATGTTGGTCGGCGGCTATATGGGCGAA---------GCC------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGCA------------------ATGTTTGGA---TTTATCGTCGGTATGGTCGGCTGGGCCTACATCCTATATGAAATC---------------TTC------TTT---GGAGAAGCAGGGAAAGTTGCAGCTGAA------AAA---GCTCCTCCATCGGTG---CAA---TCG---GCC---TTC---GTA---ACAATG---CGTTGGATCGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LIAVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGTMVMLVGGYMGE---A------G--Y-----------I----------------------NA------MFG-FIVGMVGWAYILYEI-----F--F-GEAGKVAAE--K-APPSV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC10A01]_JX863141 [III-Alpha4-ARCTIC10A01] MALINA_OTU03d_401_L_env_samples_JX863141 gi|425477232|gb|JX863141| Uncultured bacterium clone MALINA OTU03d 401 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU03d 401 L putative proteorhodopsin gene, partial cds JX863141 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC10A01-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC10A01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 16Aug2009 0m_depth Arctic Ocean marine 69.51 -133.42 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGATCACAGTTCCACTCTTGATGGTAGAATTTTATCTTATCTTGCGTGCAATCACAAATGTTTCTGGCGGAATTTTCTGGCGCTTGATGATCGGTACGATGGTAATGTTGGTCGGCGGCTACATGGGCGAAGCCGGTTACATAAATGCAATGTTTGGATTTATCGTCGGTATGGTCGGCTGGGCCTACATCCTATATGAAATCTTCTTTGGAGAAGCAGGGAAAGTTGCAGCTGAAAAAGCTCCTCCATCGGTGCAATCGGCCCTCGTAACAATGCGTTGGATCGTGACTATC WLITVPLLMVEFYLILRAITNVSGGIFWRLMIGTMVMLVGGYMGEAGYINAMFGFIVGMVGWAYILYEIFFGEAGKVAAEKAPPSVQSALVTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATCACAGTTCCACTCTTGATGGTAGAATTTTATCTTATCTTGCGTGCA---------ATC---ACAAATGTTTCTGGC---GGAATT------------------------------------TTCTGGCGC---TTGATGATCGGTACGATGGTAATGTTGGTCGGCGGCTACATGGGCGAA---------GCC------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGCA------------------ATGTTTGGA---TTTATCGTCGGTATGGTCGGCTGGGCCTACATCCTATATGAAATC---------------TTC------TTT---GGAGAAGCAGGGAAAGTTGCAGCTGAA------AAA---GCTCCTCCATCGGTG---CAA---TCG---GCC---CTC---GTA---ACAATG---CGTTGGATCGTGACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGTMVMLVGGYMGE---A------G--Y-----------I----------------------NA------MFG-FIVGMVGWAYILYEI-----F--F-GEAGKVAAE--K-APPSV-Q-S-A-L-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC10A01]_JX863142 [III-Alpha4-ARCTIC10A01] MALINA_OTU03d_449_L_env_samples_JX863142 gi|425477234|gb|JX863142| Uncultured bacterium clone MALINA OTU03d 449 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU03d 449 L putative proteorhodopsin gene, partial cds JX863142 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC10A01-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC10A01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 13Aug2009 0m_depth Arctic Ocean marine 69.25 -137.2 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGATCACAGTTCCACTCTTGATGGTAGAATTTTATCTTATCTTGCGTGCAATCACAAATGTTTCTGGCGGAATTTTCTGGCGCTTGATGATCGGTACGATGGTAATGTTGGTCGGCGGCTACATGGGCGAAGCCGGTTACATAAATGCAATGTTTGGATTTATCGTCGGTATGGTCGGCTGGGCCTACATCCTATATGAAATCTTCTTTGGAGAAGCAGGGAAAGTTGCAGCTGAAAAAGCTCCTCCATCGGTGCGATCGGCCTTCGTAACAATGCGTTGGATCGTGACTATC WLITVPLLMVEFYLILRAITNVSGGIFWRLMIGTMVMLVGGYMGEAGYINAMFGFIVGMVGWAYILYEIFFGEAGKVAAEKAPPSVRSAFVTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATCACAGTTCCACTCTTGATGGTAGAATTTTATCTTATCTTGCGTGCA---------ATC---ACAAATGTTTCTGGC---GGAATT------------------------------------TTCTGGCGC---TTGATGATCGGTACGATGGTAATGTTGGTCGGCGGCTACATGGGCGAA---------GCC------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGCA------------------ATGTTTGGA---TTTATCGTCGGTATGGTCGGCTGGGCCTACATCCTATATGAAATC---------------TTC------TTT---GGAGAAGCAGGGAAAGTTGCAGCTGAA------AAA---GCTCCTCCATCGGTG---CGA---TCG---GCC---TTC---GTA---ACAATG---CGTTGGATCGTGACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGTMVMLVGGYMGE---A------G--Y-----------I----------------------NA------MFG-FIVGMVGWAYILYEI-----F--F-GEAGKVAAE--K-APPSV-R-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-a]_FJ618953 [III-Alpha4-a] PR_108_08_09_env_samples_FJ618953 gi|223046789|gb|FJ618953| Uncultured bacterium clone PR 108 08 09 proteorhodopsin gene, partial cds Uncultured bacterium clone PR 108 08 09 proteorhodopsin gene, partial cds FJ618953 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-juil-09 #na Arctic_Ocean Arctic Ocean marine 71.37 -156.68 Photoheterotrophic microbes in the Arctic Ocean in summer and winter Cottrell,M.T. and Kirchman,D.L. Appl. Environ. Microbiol. 75 (15), 49584966 (2009) 19502441 #na TATGTAGACTGGTTGATTACTGTACCTCTGCTGATGGTAGAGTTTTATTTGATCCTACGTGCAATAACCAATGTATCAGGCGGCGTTTTCTGGCGCCTAATGATTGGGACGATGGTTATGTTGGTAGGCGGCTATATGGGCGAAGCTGGGTATATAAGTGCAATGCTCGGTTTCATCGTAGGTATGGCTGGATGGGCATATATACTTTATGAGATTTTCTTCGGCGAAGCTAGTAAAGTTGCTGCACAGGAAGCGCCCGCATCTGTTCAATCAGCGTTTAGCACGATGCGTCTAATCGTAACTATCGGGTGGGCAATATAC YVDWLITVPLLMVEFYLILRAITNVSGGVFWRLMIGTMVMLVGGYMGEAGYISAMLGFIVGMAGWAYILYEIFFGEASKVAAQEAPASVQSAFSTMRLIVTIGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTAGACTGG------------------------TTGATTACTGTACCTCTGCTGATGGTAGAGTTTTATTTGATCCTACGTGCA---------ATA---ACCAATGTATCAGGC---GGCGTT------------------------------------TTCTGGCGC---CTAATGATTGGGACGATGGTTATGTTGGTAGGCGGCTATATGGGCGAA---------GCT------------------GGG------TAT---------------------------------ATA------------------------------------------------------------------AGTGCA------------------ATGCTCGGT---TTCATCGTAGGTATGGCTGGATGGGCATATATACTTTATGAGATT---------------TTC------TTC---GGCGAAGCTAGTAAAGTTGCTGCACAG------GAA---GCGCCCGCATCTGTT---CAA---TCA---GCG---TTT---AGC---ACGATG---CGTCTAATCGTAACTATC---------------------------------------------------------------GGGTGG---------GCAATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LITVPLLMVEFYLILRA---I-TNVSG-GV------------FWR-LMIGTMVMLVGGYMGE---A------G--Y-----------I----------------------SA------MLG-FIVGMAGWAYILYEI-----F--F-GEASKVAAQ--E-APASV-Q-S-A-F-S-TM-RLIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Alpha4-a]_FJ618957 [III-Alpha4-a] PR_108_08_13_env_samples_FJ618957 gi|223046797|gb|FJ618957| Uncultured bacterium clone PR 108 08 13 proteorhodopsin gene, partial cds Uncultured bacterium clone PR 108 08 13 proteorhodopsin gene, partial cds FJ618957 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-juil-09 #na Arctic_Ocean Arctic Ocean marine 71.37 -156.68 Photoheterotrophic microbes in the Arctic Ocean in summer and winter Cottrell,M.T. and Kirchman,D.L. Appl. Environ. Microbiol. 75 (15), 49584966 (2009) 19502441 #na TATGTAGACTGGTTGATTACTGTACCTCTGCTGATGGTAGAGTTTTATTTGATCCTACGTGCAATAACCAATGTATCAGGCGGCGTTTTCTGGCGCCTAATGATTGGGACGATGGTTATGTTGGTAGGCGGCTATATGGGCGAAGCTGGGTATATAAGTGCAATGCTCGGTTTCATCGTAGGTATGGCTGGATGGGCATATATACTTTATGAGATTTTCTTCGGCGAAGCTAGTAAAGTTGCTGCACAGGAAGCGCCCGCATCTGTTCAATCAGCGTTTAGCACGATGCGTCTAATCGTAACTATCGGGTGGGCAATATAC YVDWLITVPLLMVEFYLILRAITNVSGGVFWRLMIGTMVMLVGGYMGEAGYISAMLGFIVGMAGWAYILYEIFFGEASKVAAQEAPASVQSAFSTMRLIVTIGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTAGACTGG------------------------TTGATTACTGTACCTCTGCTGATGGTAGAGTTTTATTTGATCCTACGTGCA---------ATA---ACCAATGTATCAGGC---GGCGTT------------------------------------TTCTGGCGC---CTAATGATTGGGACGATGGTTATGTTGGTAGGCGGCTATATGGGCGAA---------GCT------------------GGG------TAT---------------------------------ATA------------------------------------------------------------------AGTGCA------------------ATGCTCGGT---TTCATCGTAGGTATGGCTGGATGGGCATATATACTTTATGAGATT---------------TTC------TTC---GGCGAAGCTAGTAAAGTTGCTGCACAG------GAA---GCGCCCGCATCTGTT---CAA---TCA---GCG---TTT---AGC---ACGATG---CGTCTAATCGTAACTATC---------------------------------------------------------------GGGTGG---------GCAATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LITVPLLMVEFYLILRA---I-TNVSG-GV------------FWR-LMIGTMVMLVGGYMGE---A------G--Y-----------I----------------------SA------MLG-FIVGMAGWAYILYEI-----F--F-GEASKVAAQ--E-APASV-Q-S-A-F-S-TM-RLIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Alpha4-a]_FJ618951 [III-Alpha4-a] PR_108_08_07_env_samples_FJ618951 gi|223046785|gb|FJ618951| Uncultured bacterium clone PR 108 08 07 proteorhodopsin gene, partial cds Uncultured bacterium clone PR 108 08 07 proteorhodopsin gene, partial cds FJ618951 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-juil-09 #na Arctic_Ocean Arctic Ocean marine 71.37 -156.68 Photoheterotrophic microbes in the Arctic Ocean in summer and winter Cottrell,M.T. and Kirchman,D.L. Appl. Environ. Microbiol. 75 (15), 49584966 (2009) 19502441 #na TATGTTGATTGGTTGATTACTGTACCTCTGCTGATGGTAGAGTTTTATTTGATCCTACGTGCAATAACCAATGTATCAGGCGGCGTTTTCTGGCGCCTAATGATTGGGACGATGGTTATGTTGGTAGGCGGCTATATGGGCGAAGCTGGGTATATAAGTGCAATGCTCGGTTTCATCGTAGGTATGGCTGGATGGGCATATATACTTTATGAGATTTTCTTCGGCGAAGCTAGTAAAGTTGCTGCACAGGAAGCGCCCGCATCTGTTCAATCAGCGTTTAGCACGATGCGTCTAATCGTAACTATCGGGTGGGCAATTTAC YVDWLITVPLLMVEFYLILRAITNVSGGVFWRLMIGTMVMLVGGYMGEAGYISAMLGFIVGMAGWAYILYEIFFGEASKVAAQEAPASVQSAFSTMRLIVTIGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTTGATTGG------------------------TTGATTACTGTACCTCTGCTGATGGTAGAGTTTTATTTGATCCTACGTGCA---------ATA---ACCAATGTATCAGGC---GGCGTT------------------------------------TTCTGGCGC---CTAATGATTGGGACGATGGTTATGTTGGTAGGCGGCTATATGGGCGAA---------GCT------------------GGG------TAT---------------------------------ATA------------------------------------------------------------------AGTGCA------------------ATGCTCGGT---TTCATCGTAGGTATGGCTGGATGGGCATATATACTTTATGAGATT---------------TTC------TTC---GGCGAAGCTAGTAAAGTTGCTGCACAG------GAA---GCGCCCGCATCTGTT---CAA---TCA---GCG---TTT---AGC---ACGATG---CGTCTAATCGTAACTATC---------------------------------------------------------------GGGTGG---------GCAATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LITVPLLMVEFYLILRA---I-TNVSG-GV------------FWR-LMIGTMVMLVGGYMGE---A------G--Y-----------I----------------------SA------MLG-FIVGMAGWAYILYEI-----F--F-GEASKVAAQ--E-APASV-Q-S-A-F-S-TM-RLIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Alpha4-a]_JX863135 [III-Alpha4-a] MALINA_OTU03c_450_L_env_samples_JX863135 gi|425477220|gb|JX863135| Uncultured bacterium clone MALINA OTU03c 450 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU03c 450 L putative proteorhodopsin gene, partial cds JX863135 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 13Aug2009 0m_depth Arctic Ocean marine 69.25 -137.2 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGATTACTGTACCTCTGCTGATGGTAGAGTTTTATTTGATCCTACGTGCAATAACCAATGTATCAGGCGGCGTTTTCTGGCGCCTAATGATTGGGACGATGGTTATATTGGTAGGCGGCTATATGGGCGAAGCTGGGTATATAAGTGCAATGCTCGGTTTCATCGTAGGTATGGCTGGATGGGCATATATACTTTATGAGATTTTCTTCGGCGAAGCTAGTAAAGTTGCTGCACAGGAAGCGCCCGCATCTGTTCAATCAGCGTTTAGCACGATGCGTCTAATCGTAACTATC WLITVPLLMVEFYLILRAITNVSGGVFWRLMIGTMVILVGGYMGEAGYISAMLGFIVGMAGWAYILYEIFFGEASKVAAQEAPASVQSAFSTMRLIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGATTACTGTACCTCTGCTGATGGTAGAGTTTTATTTGATCCTACGTGCA---------ATA---ACCAATGTATCAGGC---GGCGTT------------------------------------TTCTGGCGC---CTAATGATTGGGACGATGGTTATATTGGTAGGCGGCTATATGGGCGAA---------GCT------------------GGG------TAT---------------------------------ATA------------------------------------------------------------------AGTGCA------------------ATGCTCGGT---TTCATCGTAGGTATGGCTGGATGGGCATATATACTTTATGAGATT---------------TTC------TTC---GGCGAAGCTAGTAAAGTTGCTGCACAG------GAA---GCGCCCGCATCTGTT---CAA---TCA---GCG---TTT---AGC---ACGATG---CGTCTAATCGTAACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYLILRA---I-TNVSG-GV------------FWR-LMIGTMVILVGGYMGE---A------G--Y-----------I----------------------SA------MLG-FIVGMAGWAYILYEI-----F--F-GEASKVAAQ--E-APASV-Q-S-A-F-S-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-a]_JX863131 [III-Alpha4-a] MALINA_OTU03c_424_L_env_samples_JX863131 gi|425477212|gb|JX863131| Uncultured bacterium clone MALINA OTU03c 424 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU03c 424 L putative proteorhodopsin gene, partial cds JX863131 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 16Aug2009 0m_depth Arctic Ocean marine 69.51 -133.42 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGATTACTGTACCTCTGCTGATGGTAGAGTTTTATTTGATCCTACGTGCAATAACCAATGTATCAGGCGGCGTTTCCTGGCGCCTAATGATTGGGACGATGGTTATGTTGGTAGGCGGCTATATGGGCGAAGCTGGGTATATAAGTGCAATGCTCGGTTTCATCGTAGGTATGGCTGGATGGGCATATATACTTTATGAGATTTTCTTCGGCGAAGCTAGTAAAGTTGCTGCACAGGAAGCGCCCGCATCTGTTCAATCAGCGTTTAGCACGATGCGTCTAATCGTAACTATC WLITVPLLMVEFYLILRAITNVSGGVSWRLMIGTMVMLVGGYMGEAGYISAMLGFIVGMAGWAYILYEIFFGEASKVAAQEAPASVQSAFSTMRLIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGATTACTGTACCTCTGCTGATGGTAGAGTTTTATTTGATCCTACGTGCA---------ATA---ACCAATGTATCAGGC---GGCGTT------------------------------------TCCTGGCGC---CTAATGATTGGGACGATGGTTATGTTGGTAGGCGGCTATATGGGCGAA---------GCT------------------GGG------TAT---------------------------------ATA------------------------------------------------------------------AGTGCA------------------ATGCTCGGT---TTCATCGTAGGTATGGCTGGATGGGCATATATACTTTATGAGATT---------------TTC------TTC---GGCGAAGCTAGTAAAGTTGCTGCACAG------GAA---GCGCCCGCATCTGTT---CAA---TCA---GCG---TTT---AGC---ACGATG---CGTCTAATCGTAACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYLILRA---I-TNVSG-GV------------SWR-LMIGTMVMLVGGYMGE---A------G--Y-----------I----------------------SA------MLG-FIVGMAGWAYILYEI-----F--F-GEASKVAAQ--E-APASV-Q-S-A-F-S-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-a]_JX863126 [III-Alpha4-a] MALINA_OTU03c_465_L_env_samples_JX863126 gi|425477202|gb|JX863126| Uncultured bacterium clone MALINA OTU03c 465 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU03c 465 L putative proteorhodopsin gene, partial cds JX863126 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 13Aug2009 0m_depth Arctic Ocean marine 69.25 -137.2 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGATTACTGTACCTCTGCTGATGGTAGAGTTTTATTTGATCCTACGTGCAATAACCAATGTATCAGGCGGCGTTTTCTGGCGCCTAATGATTGGGACGATGGTTATGTTGGTGGGCGGCTATATGGGCGAAGCTGGGTATATAAGTGCAATGCTCGGTTTCATCGTAGGTATGGCTGGATGGGCATATATACTTTATGAGATTTTCTTCGGCGAAGCTAGTAAAGTTGCTGCAACGGAAGCGCCCGCATCTGTTCAATCAGCGTTTAGCACGATGCGTCTAATCGTAACTATT WLITVPLLMVEFYLILRAITNVSGGVFWRLMIGTMVMLVGGYMGEAGYISAMLGFIVGMAGWAYILYEIFFGEASKVAATEAPASVQSAFSTMRLIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGATTACTGTACCTCTGCTGATGGTAGAGTTTTATTTGATCCTACGTGCA---------ATA---ACCAATGTATCAGGC---GGCGTT------------------------------------TTCTGGCGC---CTAATGATTGGGACGATGGTTATGTTGGTGGGCGGCTATATGGGCGAA---------GCT------------------GGG------TAT---------------------------------ATA------------------------------------------------------------------AGTGCA------------------ATGCTCGGT---TTCATCGTAGGTATGGCTGGATGGGCATATATACTTTATGAGATT---------------TTC------TTC---GGCGAAGCTAGTAAAGTTGCTGCAACG------GAA---GCGCCCGCATCTGTT---CAA---TCA---GCG---TTT---AGC---ACGATG---CGTCTAATCGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYLILRA---I-TNVSG-GV------------FWR-LMIGTMVMLVGGYMGE---A------G--Y-----------I----------------------SA------MLG-FIVGMAGWAYILYEI-----F--F-GEASKVAAT--E-APASV-Q-S-A-F-S-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-a]_JX863232 [III-Alpha4-a] MALINA_OTU03c_353_L_env_samples_JX863232 gi|425477414|gb|JX863232| Uncultured bacterium clone MALINA OTU03c 353 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU03c 353 L putative proteorhodopsin mRNA, partial cds JX863232 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 02Aug2009 3m_depth Arctic Ocean marine 69.61 -138.23 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGATTACTGTACCTCTGCTGATGGTAGAGTTTTATTTGATCCTACGTGCAATAACCAATGTATCAGGCGGCGTTTTCTGGCGCCTAATGATTGGGACGATGGTTATGTTGGTAGGCGGCTATATGGGCGAAGCTGGGTATATAAGTGCAATGCTCGGTTTCATCGTGGGTATGGCTGGATGGGGATATATACTTTATGAGATTTTCTTCGGCGAAGCTAGTAAAGTTGCTGCACAGGAAGCCCCCGCATCTGTTCAATCAGCGTTTAGCACGATGCGTCTAATCGTAACTATT WLITVPLLMVEFYLILRAITNVSGGVFWRLMIGTMVMLVGGYMGEAGYISAMLGFIVGMAGWGYILYEIFFGEASKVAAQEAPASVQSAFSTMRLIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGATTACTGTACCTCTGCTGATGGTAGAGTTTTATTTGATCCTACGTGCA---------ATA---ACCAATGTATCAGGC---GGCGTT------------------------------------TTCTGGCGC---CTAATGATTGGGACGATGGTTATGTTGGTAGGCGGCTATATGGGCGAA---------GCT------------------GGG------TAT---------------------------------ATA------------------------------------------------------------------AGTGCA------------------ATGCTCGGT---TTCATCGTGGGTATGGCTGGATGGGGATATATACTTTATGAGATT---------------TTC------TTC---GGCGAAGCTAGTAAAGTTGCTGCACAG------GAA---GCCCCCGCATCTGTT---CAA---TCA---GCG---TTT---AGC---ACGATG---CGTCTAATCGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYLILRA---I-TNVSG-GV------------FWR-LMIGTMVMLVGGYMGE---A------G--Y-----------I----------------------SA------MLG-FIVGMAGWGYILYEI-----F--F-GEASKVAAQ--E-APASV-Q-S-A-F-S-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-a]_JX863136 [III-Alpha4-a] MALINA_OTU03c_476_L_env_samples_JX863136 gi|425477222|gb|JX863136| Uncultured bacterium clone MALINA OTU03c 476 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU03c 476 L putative proteorhodopsin gene, partial cds JX863136 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 13Aug2009 0m_depth Arctic Ocean marine 69.25 -137.2 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGATTACTGTACCTCTGCTGATGGTAGAGTTTTATTTGATCCTACGTGCAATAACCAATGTATCAGGCGGCGTTTTCTGGCGCCTAATGATTGGGACGATGGTTATGTCGGTAGGCGGCTATATGGGCGAAGCTGGGTATATAAGTGCAATGCTCGGTTTCATCGTAGGTATGGCTGGATGGGCATATATACTTTATGAGATTTTCTTCGGCGAAGCTAGTAAAGTTGCTGCACAGGAAGCGCCCGCATCTGTTCAATCAGCGTTTAGCACGATGCGTCTAATCGTAACTATC WLITVPLLMVEFYLILRAITNVSGGVFWRLMIGTMVMSVGGYMGEAGYISAMLGFIVGMAGWAYILYEIFFGEASKVAAQEAPASVQSAFSTMRLIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGATTACTGTACCTCTGCTGATGGTAGAGTTTTATTTGATCCTACGTGCA---------ATA---ACCAATGTATCAGGC---GGCGTT------------------------------------TTCTGGCGC---CTAATGATTGGGACGATGGTTATGTCGGTAGGCGGCTATATGGGCGAA---------GCT------------------GGG------TAT---------------------------------ATA------------------------------------------------------------------AGTGCA------------------ATGCTCGGT---TTCATCGTAGGTATGGCTGGATGGGCATATATACTTTATGAGATT---------------TTC------TTC---GGCGAAGCTAGTAAAGTTGCTGCACAG------GAA---GCGCCCGCATCTGTT---CAA---TCA---GCG---TTT---AGC---ACGATG---CGTCTAATCGTAACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYLILRA---I-TNVSG-GV------------FWR-LMIGTMVMSVGGYMGE---A------G--Y-----------I----------------------SA------MLG-FIVGMAGWAYILYEI-----F--F-GEASKVAAQ--E-APASV-Q-S-A-F-S-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-a]_JX863127 [III-Alpha4-a] MALINA_OTU03c_438_L_env_samples_JX863127 gi|425477204|gb|JX863127| Uncultured bacterium clone MALINA OTU03c 438 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU03c 438 L putative proteorhodopsin gene, partial cds JX863127 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 13Aug2009 0m_depth Arctic Ocean marine 69.25 -137.2 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGATTACTGTACCTCTGCTGATGGTAGAATTTTATTTGATCCTACGTGCAATAACCAATGTATCAGGCGGCGTTTTCTGGCGCCTAATGATTGGGACGATGGTTATGTTGGTAGGCGGCTATATGGGCGAAGCTGGGTATATAAGTGCAATGCCCGGTTTCATCGTAGGTATGGCTGGATGGGCATATATACTTTATGAGATTTTCTTCGGCGAAGCTAGTAAAGTTGCTGCACAGGAAGCGCCCGCATCTGTTCAATCAGCGTTTAGCACGATGCGTCTAATCGTAACTATC WLITVPLLMVEFYLILRAITNVSGGVFWRLMIGTMVMLVGGYMGEAGYISAMPGFIVGMAGWAYILYEIFFGEASKVAAQEAPASVQSAFSTMRLIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGATTACTGTACCTCTGCTGATGGTAGAATTTTATTTGATCCTACGTGCA---------ATA---ACCAATGTATCAGGC---GGCGTT------------------------------------TTCTGGCGC---CTAATGATTGGGACGATGGTTATGTTGGTAGGCGGCTATATGGGCGAA---------GCT------------------GGG------TAT---------------------------------ATA------------------------------------------------------------------AGTGCA------------------ATGCCCGGT---TTCATCGTAGGTATGGCTGGATGGGCATATATACTTTATGAGATT---------------TTC------TTC---GGCGAAGCTAGTAAAGTTGCTGCACAG------GAA---GCGCCCGCATCTGTT---CAA---TCA---GCG---TTT---AGC---ACGATG---CGTCTAATCGTAACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYLILRA---I-TNVSG-GV------------FWR-LMIGTMVMLVGGYMGE---A------G--Y-----------I----------------------SA------MPG-FIVGMAGWAYILYEI-----F--F-GEASKVAAQ--E-APASV-Q-S-A-F-S-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-a]_JX863129 [III-Alpha4-a] MALINA_OTU03c_395_L_env_samples_JX863129 gi|425477208|gb|JX863129| Uncultured bacterium clone MALINA OTU03c 395 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU03c 395 L putative proteorhodopsin gene, partial cds JX863129 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 16Aug2009 0m_depth Arctic Ocean marine 69.51 -133.42 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGATTACTGTACCTCTGCTGATGGTAGAGTTTTATTTGATCCTACGTGCAATAACCAATGTATCAGGCGGCGTTTTCTGGCGCCTAATGATTGGGACGATGGTTATGTTGGCAGGCGGCTATATGGGCGAAGCTGGGTATATAAGTGCAATGCTCGGTTTCATCGTAGGTATGGCTGGATGGGCATATATACTTTATGAGATTTTCTTCGGCGAAGCTAGTGAAGTTGCTGCACAGGAAGCGCCCGCATCTGTTCAATCAGCGTTTAGCACGATGCGTCTAATCGTAACTATA WLITVPLLMVEFYLILRAITNVSGGVFWRLMIGTMVMLAGGYMGEAGYISAMLGFIVGMAGWAYILYEIFFGEASEVAAQEAPASVQSAFSTMRLIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGATTACTGTACCTCTGCTGATGGTAGAGTTTTATTTGATCCTACGTGCA---------ATA---ACCAATGTATCAGGC---GGCGTT------------------------------------TTCTGGCGC---CTAATGATTGGGACGATGGTTATGTTGGCAGGCGGCTATATGGGCGAA---------GCT------------------GGG------TAT---------------------------------ATA------------------------------------------------------------------AGTGCA------------------ATGCTCGGT---TTCATCGTAGGTATGGCTGGATGGGCATATATACTTTATGAGATT---------------TTC------TTC---GGCGAAGCTAGTGAAGTTGCTGCACAG------GAA---GCGCCCGCATCTGTT---CAA---TCA---GCG---TTT---AGC---ACGATG---CGTCTAATCGTAACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYLILRA---I-TNVSG-GV------------FWR-LMIGTMVMLAGGYMGE---A------G--Y-----------I----------------------SA------MLG-FIVGMAGWAYILYEI-----F--F-GEASEVAAQ--E-APASV-Q-S-A-F-S-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-a]_JX863130 [III-Alpha4-a] MALINA_OTU03c_415_L_env_samples_JX863130 gi|425477210|gb|JX863130| Uncultured bacterium clone MALINA OTU03c 415 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU03c 415 L putative proteorhodopsin gene, partial cds JX863130 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 16Aug2009 0m_depth Arctic Ocean marine 69.51 -133.42 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGATTACTGTACCTCTGCTGATGGTAGAGTTTTATTTGATCCTACGTGCAATAACCAATGTATCAGGCGGCGTTTTCTGGCGCCTAATGATTGGGACGATGGTTATGTTGGTAGGCGGCTATATGGGCGAAGCTGGGTATATAAGTGCAATGCTCGGTTTCATCGTAGGTATGGCTGGATGGGCATATATACTTTATGGGATTTTCTTCGGCGAAGCTAGTAAAGTTGCTGCACAGGAAGCGCCCGCATCTGTTCAATCAGCGTTTAGCACGATGCGTCTAATCGTAACTATC WLITVPLLMVEFYLILRAITNVSGGVFWRLMIGTMVMLVGGYMGEAGYISAMLGFIVGMAGWAYILYGIFFGEASKVAAQEAPASVQSAFSTMRLIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGATTACTGTACCTCTGCTGATGGTAGAGTTTTATTTGATCCTACGTGCA---------ATA---ACCAATGTATCAGGC---GGCGTT------------------------------------TTCTGGCGC---CTAATGATTGGGACGATGGTTATGTTGGTAGGCGGCTATATGGGCGAA---------GCT------------------GGG------TAT---------------------------------ATA------------------------------------------------------------------AGTGCA------------------ATGCTCGGT---TTCATCGTAGGTATGGCTGGATGGGCATATATACTTTATGGGATT---------------TTC------TTC---GGCGAAGCTAGTAAAGTTGCTGCACAG------GAA---GCGCCCGCATCTGTT---CAA---TCA---GCG---TTT---AGC---ACGATG---CGTCTAATCGTAACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYLILRA---I-TNVSG-GV------------FWR-LMIGTMVMLVGGYMGE---A------G--Y-----------I----------------------SA------MLG-FIVGMAGWAYILYGI-----F--F-GEASKVAAQ--E-APASV-Q-S-A-F-S-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-a]_JX863233 [III-Alpha4-a] MALINA_OTU03c_361_L_env_samples_JX863233 gi|425477416|gb|JX863233| Uncultured bacterium clone MALINA OTU03c 361 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU03c 361 L putative proteorhodopsin mRNA, partial cds JX863233 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 02Aug2009 3m_depth Arctic Ocean marine 69.61 -138.23 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGATTACTGTACCTCTGCTGATGGTAGAGTTTTATTTGATCCTACGTGCAATAACCAATGTATCAGGCGGCGTTTTCTGGCGCCTAATGATTGGGACGATGGTTATGTTGGTAGGCGGCTATATGGGCGAAGCTGGGTATATAAGTGCAATGCTCGGTTTCATAGTAGGTATGGCTGGATGGGCATATATACTTTATGAGATTTTCTTCGGCGAAGCTAGTAAAGTTGCTGCACAGGAAGCGCCCGCATCTGCTCAATCAGCGTTTAGCACGATGCGTCTAATCGTAACTATC WLITVPLLMVEFYLILRAITNVSGGVFWRLMIGTMVMLVGGYMGEAGYISAMLGFIVGMAGWAYILYEIFFGEASKVAAQEAPASAQSAFSTMRLIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGATTACTGTACCTCTGCTGATGGTAGAGTTTTATTTGATCCTACGTGCA---------ATA---ACCAATGTATCAGGC---GGCGTT------------------------------------TTCTGGCGC---CTAATGATTGGGACGATGGTTATGTTGGTAGGCGGCTATATGGGCGAA---------GCT------------------GGG------TAT---------------------------------ATA------------------------------------------------------------------AGTGCA------------------ATGCTCGGT---TTCATAGTAGGTATGGCTGGATGGGCATATATACTTTATGAGATT---------------TTC------TTC---GGCGAAGCTAGTAAAGTTGCTGCACAG------GAA---GCGCCCGCATCTGCT---CAA---TCA---GCG---TTT---AGC---ACGATG---CGTCTAATCGTAACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYLILRA---I-TNVSG-GV------------FWR-LMIGTMVMLVGGYMGE---A------G--Y-----------I----------------------SA------MLG-FIVGMAGWAYILYEI-----F--F-GEASKVAAQ--E-APASA-Q-S-A-F-S-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-a]_JX863134 [III-Alpha4-a] MALINA_OTU03c_439_L_env_samples_JX863134 gi|425477218|gb|JX863134| Uncultured bacterium clone MALINA OTU03c 439 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU03c 439 L putative proteorhodopsin gene, partial cds JX863134 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 13Aug2009 0m_depth Arctic Ocean marine 69.25 -137.2 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGATTACTGTACCTCTGCTGATAGTAGAGTTTTATTTGATCCTACGTGCAATAACCAATGTATCAGGCGGCGTTTTCTGGCGCCTAATGATTGGGACGATGGTTATGTTGGTAGGCGGCTATATGGGCGAAGCTGGGTATATAAGTGCAATGCTCGGTTTCATCGTAGGTATGGCTGGATGGGCATATATACTTTATGAGATTTTCTTCGGCGAAGCTAGTAAAGTTGCTGCACAGGAAGCGCCCGCATCTGTTCAATCAGCGTTTAGCACGATGCGTCTAATCGTAACTATC WLITVPLLIVEFYLILRAITNVSGGVFWRLMIGTMVMLVGGYMGEAGYISAMLGFIVGMAGWAYILYEIFFGEASKVAAQEAPASVQSAFSTMRLIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGATTACTGTACCTCTGCTGATAGTAGAGTTTTATTTGATCCTACGTGCA---------ATA---ACCAATGTATCAGGC---GGCGTT------------------------------------TTCTGGCGC---CTAATGATTGGGACGATGGTTATGTTGGTAGGCGGCTATATGGGCGAA---------GCT------------------GGG------TAT---------------------------------ATA------------------------------------------------------------------AGTGCA------------------ATGCTCGGT---TTCATCGTAGGTATGGCTGGATGGGCATATATACTTTATGAGATT---------------TTC------TTC---GGCGAAGCTAGTAAAGTTGCTGCACAG------GAA---GCGCCCGCATCTGTT---CAA---TCA---GCG---TTT---AGC---ACGATG---CGTCTAATCGTAACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLIVEFYLILRA---I-TNVSG-GV------------FWR-LMIGTMVMLVGGYMGE---A------G--Y-----------I----------------------SA------MLG-FIVGMAGWAYILYEI-----F--F-GEASKVAAQ--E-APASV-Q-S-A-F-S-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-a]_JX863133 [III-Alpha4-a] MALINA_OTU03c_437_L_env_samples_JX863133 gi|425477216|gb|JX863133| Uncultured bacterium clone MALINA OTU03c 437 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU03c 437 L putative proteorhodopsin gene, partial cds JX863133 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 13Aug2009 0m_depth Arctic Ocean marine 69.25 -137.2 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGATTACGGTACCTCCGCTGATGGTAGAGTTTTATTTGATCCTACGTGCAATAACCAATGTGTCAGGCGGCGTTTTCTGGCGCCTAATGATTGGGACGATGGTTATGTTGGTAGGCGGCTATATGGGCGAAGCTGGGTATATAAGTGCAATGCTCGGTTTCATCGTAGGTATGGCTGGATGGGCATATATACTTTATGAGATTTTCTTCGGCGAAGCTAGTAAAGTTGCTGCACAGGAAGCGCCCGCATCTGTTCAATCAGCGTTTAGCACGATGCGTCTAATCGTAACTATC WLITVPPLMVEFYLILRAITNVSGGVFWRLMIGTMVMLVGGYMGEAGYISAMLGFIVGMAGWAYILYEIFFGEASKVAAQEAPASVQSAFSTMRLIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGATTACGGTACCTCCGCTGATGGTAGAGTTTTATTTGATCCTACGTGCA---------ATA---ACCAATGTGTCAGGC---GGCGTT------------------------------------TTCTGGCGC---CTAATGATTGGGACGATGGTTATGTTGGTAGGCGGCTATATGGGCGAA---------GCT------------------GGG------TAT---------------------------------ATA------------------------------------------------------------------AGTGCA------------------ATGCTCGGT---TTCATCGTAGGTATGGCTGGATGGGCATATATACTTTATGAGATT---------------TTC------TTC---GGCGAAGCTAGTAAAGTTGCTGCACAG------GAA---GCGCCCGCATCTGTT---CAA---TCA---GCG---TTT---AGC---ACGATG---CGTCTAATCGTAACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPPLMVEFYLILRA---I-TNVSG-GV------------FWR-LMIGTMVMLVGGYMGE---A------G--Y-----------I----------------------SA------MLG-FIVGMAGWAYILYEI-----F--F-GEASKVAAQ--E-APASV-Q-S-A-F-S-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-a]_JX863128 [III-Alpha4-a] MALINA_OTU03c_380_L_env_samples_JX863128 gi|425477206|gb|JX863128| Uncultured bacterium clone MALINA OTU03c 380 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU03c 380 L putative proteorhodopsin gene, partial cds JX863128 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 16Aug2009 0m_depth Arctic Ocean marine 69.51 -133.42 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGATTACTGTACCTCTGCTGATGGTAGAGTTTTATTTGATCCTACGTGCAATAACCAATGTATCAGGCGGCGTTTTCTGGCGCCTAATGATTGGGACGATGGTTATGTTGGTAGGCGGCTATATGGGCGAAGCTGGGTATATAAGTGCAATGCTCGGTTTCATCGTAGGTATGGCTGGATGGGCATATATACTTTATGAGATTTTCTTCGGCGAAGCTAGTAAAGTTGCTGTACAGGAAGCGCCTGCATCTGTTCAATCAGCGTTTAGCACGATGCGTCTAATCGTAACTATC WLITVPLLMVEFYLILRAITNVSGGVFWRLMIGTMVMLVGGYMGEAGYISAMLGFIVGMAGWAYILYEIFFGEASKVAVQEAPASVQSAFSTMRLIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGATTACTGTACCTCTGCTGATGGTAGAGTTTTATTTGATCCTACGTGCA---------ATA---ACCAATGTATCAGGC---GGCGTT------------------------------------TTCTGGCGC---CTAATGATTGGGACGATGGTTATGTTGGTAGGCGGCTATATGGGCGAA---------GCT------------------GGG------TAT---------------------------------ATA------------------------------------------------------------------AGTGCA------------------ATGCTCGGT---TTCATCGTAGGTATGGCTGGATGGGCATATATACTTTATGAGATT---------------TTC------TTC---GGCGAAGCTAGTAAAGTTGCTGTACAG------GAA---GCGCCTGCATCTGTT---CAA---TCA---GCG---TTT---AGC---ACGATG---CGTCTAATCGTAACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYLILRA---I-TNVSG-GV------------FWR-LMIGTMVMLVGGYMGE---A------G--Y-----------I----------------------SA------MLG-FIVGMAGWAYILYEI-----F--F-GEASKVAVQ--E-APASV-Q-S-A-F-S-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-a]_JX863132 [III-Alpha4-a] MALINA_OTU03c_434_L_env_samples_JX863132 gi|425477214|gb|JX863132| Uncultured bacterium clone MALINA OTU03c 434 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU03c 434 L putative proteorhodopsin gene, partial cds JX863132 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 13Aug2009 0m_depth Arctic Ocean marine 69.25 -137.2 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGATTACTGTACCTCTGCTGATGGTAGAGTTTTATTTGATCCTACGTGCAATAACCAACGTATCAGGCGGCGTTTCCTGGCGCCTAATGATTGAGACGATGGTTATGTTGGTAGGCGGCTATATGGGCGAAGCTGGGTATATAAGTGCAATGCTCGGTTTCATCGTAGGTATGGCTGGTTGGGCATATATACTTTATGAGATTTTCTTCGGCGAAGCTAGTAAAGTTGCTGCACAGGAAGCGCCTGCATCTGTTCAATCAGCGTTTAGCACGATGCGTCTAATCGTAACTATC WLITVPLLMVEFYLILRAITNVSGGVSWRLMIETMVMLVGGYMGEAGYISAMLGFIVGMAGWAYILYEIFFGEASKVAAQEAPASVQSAFSTMRLIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGATTACTGTACCTCTGCTGATGGTAGAGTTTTATTTGATCCTACGTGCA---------ATA---ACCAACGTATCAGGC---GGCGTT------------------------------------TCCTGGCGC---CTAATGATTGAGACGATGGTTATGTTGGTAGGCGGCTATATGGGCGAA---------GCT------------------GGG------TAT---------------------------------ATA------------------------------------------------------------------AGTGCA------------------ATGCTCGGT---TTCATCGTAGGTATGGCTGGTTGGGCATATATACTTTATGAGATT---------------TTC------TTC---GGCGAAGCTAGTAAAGTTGCTGCACAG------GAA---GCGCCTGCATCTGTT---CAA---TCA---GCG---TTT---AGC---ACGATG---CGTCTAATCGTAACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYLILRA---I-TNVSG-GV------------SWR-LMIETMVMLVGGYMGE---A------G--Y-----------I----------------------SA------MLG-FIVGMAGWAYILYEI-----F--F-GEASKVAAQ--E-APASV-Q-S-A-F-S-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926175 [III-Alpha3-a] RHOMEO_AG_OTU14_u2 gb|KJ926175| Uncultured bacterium cloneRHOMEO AG OTU14 u2 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU14 u2 putative proteorhodopsin gene, partial cds KJ926175 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGCTGATTACAGTACCGCTGCTAATGGTTGAATTCTACTTAATTCTTCGGGCAGTCACAGCTGTATCAGGTGGCATTTTCTGGCGTCTAATGATCGGAACACTGGTTATGCTTGTCGGCGGCTACGCTGGTGAGGTCGGCTATATCGGTGCATGGCCAGGCTTTATTATCGGCATGGTCGGTTGGGCGTACATCCTGTATGAAATCTTTGCAGGTGAAGCTAGCCGTGTTGCATCTGAAAAAGCATCCCCAGCAGTTCAGTCAGCTTTTTCAACAATGCGCTGGATTGTATCTATT WLITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWPGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATTACAGTACCGCTGCTAATGGTTGAATTCTACTTAATTCTTCGGGCA---------GTC---ACAGCTGTATCAGGT---GGCATT------------------------------------TTCTGGCGT---CTAATGATCGGAACACTGGTTATGCTTGTCGGCGGCTACGCTGGTGAG---------GTC------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------GGTGCA------------------TGGCCAGGC---TTTATTATCGGCATGGTCGGTTGGGCGTACATCCTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGCCGTGTTGCATCTGAA------AAA---GCATCCCCAGCAGTT---CAG---TCA---GCT---TTT---TCA---ACAATG---CGCTGGATTGTATCTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WPG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_1105120020522 [III-Alpha3-a] JCVI_ORF_1105120020522_GS008_Coastal_1m jcvi|1105120020522| 1105120020522 JCVI ORF 1105120020522 1105120020522 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 16-nov-03 Coastal/1m_depth/S_26.5_psu/GS008/Newport_Harbor/RI/North_American_East_Coast Atlantic Ocean marine 41.485832 -71.35111 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAGTTTGATAACATCTAAAAGCGCGAAAGCATCCCTTTTAGCAGCAGCATTTACGTTACTGCCAGCCGCAGCAAATGCAGCTGACGCTCTAACATTAAAGGCTGATGATTACGTTGGGATTTCTTTCTGGCTCATCTCGATGGCTTTGGTCGCAGCAACGGCCTTTTTCTTCATCGAAACAACCCGCGTGCAAGGTAAATGGAAGACGTCACTGACAGTGTCAGGTCTTGTTACCCTTGTAGCAGCGGTGCATTACTTCTACATGCGTGACGTTTGGGTCGCAACCGGCGAAACACCGACAGTTTATCGTTATATTGATTGGCTGATCACTGTGCCGCTACTCATGGTTGAATTTTACCTAATCCTAAGAGCAGTCACTGCTGTCTCAGGCGGCATTTTCTGGCGTCTGATGATAGGTACACTAGTCATGCTTGTTGGTGGTTATGCTGGTGAAGTAGGCTATATCGGTGCATGGGCAGGCTTTATTATTGGTATGGTCGGTTGGGCTTACATTCTGTACGAAATCTTTGCAGGCGAAGCCAGCCGTGTTGCATCTGAAAAGGCATCTCCGGCAGTACAGTCAGCCTTTTCAACTATGCGCTGGATTGTATCCATTGGTTGGGCAATTTACCCAATCGGCTATTTTATGGGCTACCTCAACGGTGCCGTCAGCGATGAGTCGCTGAACGTGATCTACAACATAGCCGACGTCTGGAACAAGATCGCCTTTGGTGTGATCATCTGGAACGTTGCGGTTACTGAATCCGAATCAAAA MSLITSKSAKASLLAAAFTLLPAAANAADALTLKADDYVGISFWLISMALVAATAFFFIETTRVQGKWKTSLTVSGLVTLVAAVHYFYMRDVWVATGETPTVYRYIDWLITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSIGWAIYPIGYFMGYLNGAVSDESLNVIYNIADVWNKIAFGVIIWNVAVTESESK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAGTTTGATAACATCTAAAAGCGCGAAAGCATCCCTTTTAGCAGCAGCATTTACGTTACTGCCAGCCGCAGCAAATGCAGCTGACGCTCTAACATTAAAGGCTGATGATTACGTTGGGATTTCTTTCTGGCTCATCTCGATGGCTTTGGTCGCAGCAACGGCCTTTTTCTTCATCGAAACAACCCGCGTGCAAGGT---AAATGGAAGACGTCACTGACAGTGTCAGGTCTTGTTACCCTTGTAGCAGCGGTGCATTACTTCTACATGCGTGACGTTTGGGTC------------------------------GCAACC---------------------GGCGAAACACCGACAGTTTATCGTTATATTGATTGG------------------------CTGATCACTGTGCCGCTACTCATGGTTGAATTTTACCTAATCCTAAGAGCA---------GTC---ACTGCTGTCTCAGGC---GGCATT------------------------------------TTCTGGCGT---CTGATGATAGGTACACTAGTCATGCTTGTTGGTGGTTATGCTGGTGAA---------GTA------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------GGTGCA------------------TGGGCAGGC---TTTATTATTGGTATGGTCGGTTGGGCTTACATTCTGTACGAAATC---------------TTT------GCA---GGCGAAGCCAGCCGTGTTGCATCTGAA------AAG---GCATCTCCGGCAGTA---CAG---TCA---GCC---TTT---TCA---ACTATG---CGCTGGATTGTATCCATT---------------------------------------------------------------GGTTGG---------GCAATTTACCCAATCGGCTATTTTATGGGCTACCTC---------------------------------------AACGGTGCCGTCAGCGATGAGTCGCTGAACGTGATCTACAACATAGCCGACGTCTGGAACAAGATCGCCTTTGGTGTGATCATCTGGAACGTTGCGGTTACTGAA---TCCGAATCAAAA--------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------MSLITSKSAKASLLAAAFTLLPAAANAADALTLKADDYVGISFWLISMALVAATAFFFIETTRVQG-KWKTSLTVSGLVTLVAAVHYFYMRDVWV----------AT-------GETPTVYRYIDW--------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI---------------------GW---AIYPIGYFMGYL-------------NGAVSDESLNVIYNIADVWNKIAFGVIIWNVAVTE-SESK------------------------------------- [III-Alpha3-a]_1105093160136 [III-Alpha3-a] JCVI_ORF_1105093160136 jcvi|1105093160136| 1105093160136 JCVI ORF 1105093160136 1105093160136 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 17-nov-03 Coastal/1m_depth/S_31_psu/GS009/Block_Island/NY/North_American_East_Coast Atlantic Ocean marine 41.09111 -71.60222 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf GTGGGGATTTCTTCTGCTCATCTCGATGGCTTTGGTCGCAGCAACGGCCTTTTTCTCATCGAAACAACCCGCGTACAAGGGAAATGGAAGACATCACTGACAGTGTCAGGTCTTGTTACCCTCGTAGCAGCAGTGCATTACTTTTACATGCGTGACGTTTGGGTTGCAACCGGCGAAACACCGACAGTTTATCGTTACATCGATTGGCTGATCACTGTGCCGCTACTCATGGTTGAATTTTACCTGATCCTACGGGCAGTCACGGCTGTTTCAGGCGGCATTTTCTGGCGTCTGATGATCGGCACACTAGTCATGCTTGTCGGCGGTTATGCTGGTGAGGTTGGCTATATCGGTGCATGGGCAGGCTTTATTATTGGTATGGTCGGTTGGGCCTACATTCTGTACGAAATTTTTGCAGGCGAAGCCAGCCGTGTTGCATCTGAAAAGGCATCTCCGGCAGTCCAGTCAGCCTTTTCAACTATGCGTTGGATTGTATCCATTGGTTGGGCAATTTACCCAATCGGTTATTTCATGGGCTACCTCAACGGTGCCGTCAGCGATGAGTCGTTGAACGTGATCTACAATATAGCCGACGTCTGGAATAAGATCGCCTTTGGTGTGATTATCTGGAACGTTGCGGTTACTGAATCCGAATCAAAA VGISSAHLDGFGRSNGLFLIETTRVQGKWKTSLTVSGLVTLVAAVHYFYMRDVWVATGETPTVYRYIDWLITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSIGWAIYPIGYFMGYLNGAVSDESLNVIYNIADVWNKIAFGVIIWNVAVTESESK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGGGGATTTCTTCTGCTCATCTCGAT---GGCTTTGGTCGCAGCAACGGCCTTTTTCTCATCGAAACAACCCGCGTACAAGGG---AAATGGAAGACATCACTGACAGTGTCAGGTCTTGTTACCCTCGTAGCAGCAGTGCATTACTTTTACATGCGTGACGTTTGGGTT------------------------------GCAACC---------------------GGCGAAACACCGACAGTTTATCGTTACATCGATTGG------------------------CTGATCACTGTGCCGCTACTCATGGTTGAATTTTACCTGATCCTACGGGCA---------GTC---ACGGCTGTTTCAGGC---GGCATT------------------------------------TTCTGGCGT---CTGATGATCGGCACACTAGTCATGCTTGTCGGCGGTTATGCTGGTGAG---------GTT------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------GGTGCA------------------TGGGCAGGC---TTTATTATTGGTATGGTCGGTTGGGCCTACATTCTGTACGAAATT---------------TTT------GCA---GGCGAAGCCAGCCGTGTTGCATCTGAA------AAG---GCATCTCCGGCAGTC---CAG---TCA---GCC---TTT---TCA---ACTATG---CGTTGGATTGTATCCATT---------------------------------------------------------------GGTTGG---------GCAATTTACCCAATCGGTTATTTCATGGGCTACCTC---------------------------------------AACGGTGCCGTCAGCGATGAGTCGTTGAACGTGATCTACAATATAGCCGACGTCTGGAATAAGATCGCCTTTGGTGTGATTATCTGGAACGTTGCGGTTACTGAA---TCCGAATCAAAA--------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------VGISSAHLD-GFGRSNGLFLIETTRVQG-KWKTSLTVSGLVTLVAAVHYFYMRDVWV----------AT-------GETPTVYRYIDW--------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI---------------------GW---AIYPIGYFMGYL-------------NGAVSDESLNVIYNIADVWNKIAFGVIIWNVAVTE-SESK------------------------------------- [III-Alpha3-a]_1105101180538 [III-Alpha3-a] JCVI_ORF_1105101180538_GS009_Coastal_1m jcvi|1105101180538| 1105101180538 JCVI ORF 1105101180538 1105101180538 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 17-nov-03 Coastal/1m_depth/S_31_psu/GS009/Block_Island/NY/North_American_East_Coast Atlantic Ocean marine 41.09111 -71.60222 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAGTTTGATAACAACAAAAGGCGCGAGAGCATCCCTTTTTGCAGCAGCATTCACGTTACTGCCAGCCGCAGCAAATGCAGCTGACGCTTTAACACTGAAGGCTGATGATTACGTGGGGATTTCTTTCTGGCTCATCTCGATGGCTTTGGTCGCAGCAACGGCCTTTTTCTTCATCGAAACAACCCGCGTACAAGGGAAATGGAAGACATCACTGACAGTGTCAGGTCTTGTTACCCTCGTAGCAGCAGTGCATTACTTTTACATGCGTGACGTTTGGGTTGCAACCGGCGAAACACCGACAGTTTATCGTTACATCGATTGGCTGATCACTGTGCCGCTACTCATGGTTGAATTTTACCTGATCCTACGGGCAGTCACGGCTGTTTCAGGCGGCATTTTCTGGCGTCTGATGATCGGCACACTAGTCATGCTTGTCGGCGGTTATGCTGGTGAGGTTGGCTATATCGGTGCATGGGCAGGCTTTATTATTGGTATGGTCGGTTGGGCCTACATTCTGTACGAAATTTTTGCAGGCGAAGCCAGCCGTGTTGCATCTGAAAAGGCATCTCCGGCAGTCCAGTCAGCCTTTTCAACTATGCGTTGGATTGTATCCATTGGTTGGGCAATTTACCCAATCGGTTATTTCATGGGCTACCTCAACGGTGCCGTCAGCGATGAGTCGTTGAACGTGATCTACAATATAGCCGACGTCTGGAATAAGATCGCCTTTGGTGTGATTATCTGGAACGTTGCGGTTACTGAATCCGAATCAAAA MSLITTKGARASLFAAAFTLLPAAANAADALTLKADDYVGISFWLISMALVAATAFFFIETTRVQGKWKTSLTVSGLVTLVAAVHYFYMRDVWVATGETPTVYRYIDWLITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSIGWAIYPIGYFMGYLNGAVSDESLNVIYNIADVWNKIAFGVIIWNVAVTESESK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAGTTTGATAACAACAAAAGGCGCGAGAGCATCCCTTTTTGCAGCAGCATTCACGTTACTGCCAGCCGCAGCAAATGCAGCTGACGCTTTAACACTGAAGGCTGATGATTACGTGGGGATTTCTTTCTGGCTCATCTCGATGGCTTTGGTCGCAGCAACGGCCTTTTTCTTCATCGAAACAACCCGCGTACAAGGG---AAATGGAAGACATCACTGACAGTGTCAGGTCTTGTTACCCTCGTAGCAGCAGTGCATTACTTTTACATGCGTGACGTTTGGGTT------------------------------GCAACC---------------------GGCGAAACACCGACAGTTTATCGTTACATCGATTGG------------------------CTGATCACTGTGCCGCTACTCATGGTTGAATTTTACCTGATCCTACGGGCA---------GTC---ACGGCTGTTTCAGGC---GGCATT------------------------------------TTCTGGCGT---CTGATGATCGGCACACTAGTCATGCTTGTCGGCGGTTATGCTGGTGAG---------GTT------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------GGTGCA------------------TGGGCAGGC---TTTATTATTGGTATGGTCGGTTGGGCCTACATTCTGTACGAAATT---------------TTT------GCA---GGCGAAGCCAGCCGTGTTGCATCTGAA------AAG---GCATCTCCGGCAGTC---CAG---TCA---GCC---TTT---TCA---ACTATG---CGTTGGATTGTATCCATT---------------------------------------------------------------GGTTGG---------GCAATTTACCCAATCGGTTATTTCATGGGCTACCTC---------------------------------------AACGGTGCCGTCAGCGATGAGTCGTTGAACGTGATCTACAATATAGCCGACGTCTGGAATAAGATCGCCTTTGGTGTGATTATCTGGAACGTTGCGGTTACTGAA---TCCGAATCAAAA--------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------MSLITTKGARASLFAAAFTLLPAAANAADALTLKADDYVGISFWLISMALVAATAFFFIETTRVQG-KWKTSLTVSGLVTLVAAVHYFYMRDVWV----------AT-------GETPTVYRYIDW--------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI---------------------GW---AIYPIGYFMGYL-------------NGAVSDESLNVIYNIADVWNKIAFGVIIWNVAVTE-SESK------------------------------------- [III-Alpha3-a]_DQ203591 [III-Alpha3-a] medHO120A7_env_samples_DQ203591 gi|77547630|gb|DQ203591| Uncultured bacterium clone medHO120A7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120A7 predicted proteorhodopsin gene, partial cds DQ203591 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGATTGGCTGATTACTGTGCCGCTACTCATGGTTGAATTCTACTTAATCCTACGGGCAGTCACTGCTGTATCAGGCGGAATTTTCTGGCGTCTGATGATCGGTACACTCGTCATGCTTGTCGGCGGTTATGCTGGTGAGGTTGGCTACATCGGTGCATGGGCCGGCTTCATTATCGGCATGGTCGGTTGGGCCTACATTCTATACGAAATCTTTGCAGGTGAAGCCAGCCGGGTTGCGTCTGAAAAGGCTTCTCCAGCAGTGCAGTCAGCCTTTTCAACTATGCGTTGGATTGTATCTATTGGTTGGGCAATCTACCCA SYIDWLITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGATTGG------------------------CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACTTAATCCTACGGGCA---------GTC---ACTGCTGTATCAGGC---GGAATT------------------------------------TTCTGGCGT---CTGATGATCGGTACACTCGTCATGCTTGTCGGCGGTTATGCTGGTGAG---------GTT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------GGTGCA------------------TGGGCCGGC---TTCATTATCGGCATGGTCGGTTGGGCCTACATTCTATACGAAATC---------------TTT------GCA---GGTGAAGCCAGCCGGGTTGCGTCTGAA------AAG---GCTTCTCCAGCAGTG---CAG---TCA---GCC---TTT---TCA---ACTATG---CGTTGGATTGTATCTATT---------------------------------------------------------------GGTTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha3-a]_DQ203657 [III-Alpha3-a] medHO120H8_env_samples_DQ203657 gi|77547762|gb|DQ203657| Uncultured bacterium clone medHO120H8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120H8 predicted proteorhodopsin gene, partial cds DQ203657 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGATTGGCTGATTACTGTGCCGCTACTCATGGTTGAATTCTACTTAATCCTACGGGCAGTCACTGCTGTATCAGGCGGAATTTTCTGGCGTCTGATGATCGGTACACTCGTCATGCTTGTCGGCGGTTATGCTGGTGAGGTTGGCTACATCGGTGCATGGGCCGGCTTCATTATCGGCATGGTCGGTTGGGCCTACATTCTATACGAAATCTTTGCAGGTGAAGCCAGCCGGGTTGCGTCTGAAAAGGCTTCTCCAGCAGTGCAGTCAGCCTTTTCAACTATGCGTTGGATTGTATCTATTGGTTGGGCAATCTATCCA SYIDWLITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGATTGG------------------------CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACTTAATCCTACGGGCA---------GTC---ACTGCTGTATCAGGC---GGAATT------------------------------------TTCTGGCGT---CTGATGATCGGTACACTCGTCATGCTTGTCGGCGGTTATGCTGGTGAG---------GTT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------GGTGCA------------------TGGGCCGGC---TTCATTATCGGCATGGTCGGTTGGGCCTACATTCTATACGAAATC---------------TTT------GCA---GGTGAAGCCAGCCGGGTTGCGTCTGAA------AAG---GCTTCTCCAGCAGTG---CAG---TCA---GCC---TTT---TCA---ACTATG---CGTTGGATTGTATCTATT---------------------------------------------------------------GGTTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha3-a]_DQ203599 [III-Alpha3-a] medHO120B5_env_samples_DQ203599 gi|77547646|gb|DQ203599| Uncultured bacterium clone medHO120B5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120B5 predicted proteorhodopsin gene, partial cds DQ203599 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGATTGGCTGATTACTGTGCCGCTACTCATGGTTGAATTCTACTTAATCCTACGGGCAGTCACTGCTGTATCAGGCGGAATTTTCTGGCGTCTGATGATCGGTACACTCGTCATGCTTGTCGGCGGTTATGCTGGTGAGGTTGGCTACATCGGTGCATGGGCCGGCTTCATTATCGGCATGGTCGGTTGGGCCTACATTCTATACGAAATCTTTGCAGGTGAAGCCAGCCGGGTTGCGTCTGAAAAGGCTTCTCCAGCAGTGCAGTCAGCCTTTTCAACTATGCGTTGGATTGTATCTATTGGTTGGGCAATCTACCCA SYIDWLITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGATTGG------------------------CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACTTAATCCTACGGGCA---------GTC---ACTGCTGTATCAGGC---GGAATT------------------------------------TTCTGGCGT---CTGATGATCGGTACACTCGTCATGCTTGTCGGCGGTTATGCTGGTGAG---------GTT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------GGTGCA------------------TGGGCCGGC---TTCATTATCGGCATGGTCGGTTGGGCCTACATTCTATACGAAATC---------------TTT------GCA---GGTGAAGCCAGCCGGGTTGCGTCTGAA------AAG---GCTTCTCCAGCAGTG---CAG---TCA---GCC---TTT---TCA---ACTATG---CGTTGGATTGTATCTATT---------------------------------------------------------------GGTTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha3-a]_JX863321 [III-Alpha3-a] MALINA_OTU48_257_L_env_samples_JX863321 gi|425477592|gb|JX863321| Uncultured bacterium clone MALINA OTU48 257 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU48 257 L putative proteorhodopsin mRNA, partial cds JX863321 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 11Aug2009 3m_depth Arctic Ocean marine 70.68 -139.62 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGATCACTGTGCCACTTCTGATGATTGAATTCTACCTGATCCTACGGGCAATCACCGTTGTATCTGGCGGCATTTTCTGGCGTCTGATGATCGGTACTTTTGTCATGCTCGTTGGTGGTTATGCTGGCGAAATTGGTTACATCAGTGCTTGGGCAGGTTTCATCATCGGTATGCTCGGTTGGGCATATATCCTGTGGGAGATCTTTGCAGGTGAAGCCAGCCGTGTTGCTGCTGAAAAAGCGCCTGCTTCTGTGCAGTCAGCCTTTTCAACAATGCGTTGGATTGTCACAATT WLITVPLLMIEFYLILRAITVVSGGIFWRLMIGTFVMLVGGYAGEIGYISAWAGFIIGMLGWAYILWEIFAGEASRVAAEKAPASVQSAFSTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATCACTGTGCCACTTCTGATGATTGAATTCTACCTGATCCTACGGGCA---------ATC---ACCGTTGTATCTGGC---GGCATT------------------------------------TTCTGGCGT---CTGATGATCGGTACTTTTGTCATGCTCGTTGGTGGTTATGCTGGCGAA---------ATT------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AGTGCT------------------TGGGCAGGT---TTCATCATCGGTATGCTCGGTTGGGCATATATCCTGTGGGAGATC---------------TTT------GCA---GGTGAAGCCAGCCGTGTTGCTGCTGAA------AAA---GCGCCTGCTTCTGTG---CAG---TCA---GCC---TTT---TCA---ACAATG---CGTTGGATTGTCACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFYLILRA---I-TVVSG-GI------------FWR-LMIGTFVMLVGGYAGE---I------G--Y-----------I----------------------SA------WAG-FIIGMLGWAYILWEI-----F--A-GEASRVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_DQ203422 [III-Alpha3-a] MedHO102H12_env_samples_DQ203422 gi|77547292|gb|DQ203422| Uncultured bacterium clone MedHO102H12 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102H12 predicted proteorhodopsin gene, partial cds DQ203422 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGATTGGCTAATCACCGTGCCATTGCTGATGATCGAATTCTACTTGATCTTGCGGGCCATTACAGCCGTCTCTGGCGGTATCTTCTGGCGTCTGATGATTGGTACAATGGTCATGCTGGTCGGTGGTTATGCTGGCGAGGTGGGTTACATCGGCGCATGGGCCGGATTCATCATCGGTATGGTCGGTTGGGCGTACATCCTGTATGAAATCTTTGCAGGTGAAGCCAGCCGGGTTGCGGCCGAACAGGCACCGCCATCAGTGCAGTCAGCCTTTTCAACAATGCGTTGGATTGTGACCATTGGTTGGGCCATTTACCCA SYIDWLITVPLLMIEFYLILRAITAVSGGIFWRLMIGTMVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVAAEQAPPSVQSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGATTGG------------------------CTAATCACCGTGCCATTGCTGATGATCGAATTCTACTTGATCTTGCGGGCC---------ATT---ACAGCCGTCTCTGGC---GGTATC------------------------------------TTCTGGCGT---CTGATGATTGGTACAATGGTCATGCTGGTCGGTGGTTATGCTGGCGAG---------GTG------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------GGCGCA------------------TGGGCCGGA---TTCATCATCGGTATGGTCGGTTGGGCGTACATCCTGTATGAAATC---------------TTT------GCA---GGTGAAGCCAGCCGGGTTGCGGCCGAA------CAG---GCACCGCCATCAGTG---CAG---TCA---GCC---TTT---TCA---ACAATG---CGTTGGATTGTGACCATT---------------------------------------------------------------GGTTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTMVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVAAE--Q-APPSV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926174 [III-Alpha3-a] RHOMEO_AG_OTU14 gb|KJ926174| Uncultured bacterium cloneRHOMEO AG OTU14 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU14 putative proteorhodopsin gene, partial cds KJ926174 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGCTGATCACGGTGCCATTATTGATGATCGAATTTTACTTGATCTTGCGGGCTATTACTGCCGTTTCTGGCGGAATATTCTGGCGTCTAATGATTGGTACTTTTGTGATGCTCGTCGGTGGTTATGCTGGCGAAATTGGCTATATCAGTGCATGGGCCGGTTTCATTATCGGCATGCTTGGTTGGGCCTACATTCTGTATGAAATCTTTGCAGGTGAAGCCAGCCGAGTAGCCGCGGAAAAAGCACCGCCATCAGTGCAATCAGCCTTTTCAACAATGCGTTGGATTGTTACCATT WLITVPLLMIEFYLILRAITAVSGGIFWRLMIGTFVMLVGGYAGEIGYISAWAGFIIGMLGWAYILYEIFAGEASRVAAEKAPPSVQSAFSTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATCACGGTGCCATTATTGATGATCGAATTTTACTTGATCTTGCGGGCT---------ATT---ACTGCCGTTTCTGGC---GGAATA------------------------------------TTCTGGCGT---CTAATGATTGGTACTTTTGTGATGCTCGTCGGTGGTTATGCTGGCGAA---------ATT------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AGTGCA------------------TGGGCCGGT---TTCATTATCGGCATGCTTGGTTGGGCCTACATTCTGTATGAAATC---------------TTT------GCA---GGTGAAGCCAGCCGAGTAGCCGCGGAA------AAA---GCACCGCCATCAGTG---CAA---TCA---GCC---TTT---TCA---ACAATG---CGTTGGATTGTTACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTFVMLVGGYAGE---I------G--Y-----------I----------------------SA------WAG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--K-APPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_1105121745088 [III-Alpha3-a] JCVI_ORF_1105121745088 jcvi|1105121745088| 1105121745088 JCVI ORF 1105121745088 1105121745088 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 16-nov-03 Coastal/1m_depth/S_26.5_psu/GS008/Newport_Harbor/RI/North_American_East_Coast Atlantic Ocean marine 41.485832 -71.35111 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf AGGGCTGGACGGCTTTTTCTTCTCGAAACCACCCGCGTGCAAGGCAAATGGAAGACATCATTGACAGTGTCAGGTCTTGTTACCCTGATCGCGGCTGTGCATTATTTCTACATGCGTGATGTATGGATCGCGACAGGAGAAACACCAACAGTTTATCGTTACATCGATTGGCTGATCACGGTGCCATTATTGATGATCGAATTTTACTTGATCTTGCGGGCTATTACTGCCGTTTCTGGCGGAATATTCTGGCGTCTGATGATTGGTACTTTTGTGATGCTCGTCGGTGGTTATGCTGGCGAAATTGGCTATATCAGTGCATGGGCCGGTTTCATTATCGGCATGCTTGGTTGGGCCTACATTCTGTATGAAATCTTTGCAGGTGAAGCCAGCCGAGTAGCCGCGGAAAAAGCACCGCCATCAGTGCAATCAGCCTTTTCAACAATGCGTTGGATTGTTACCATTGGTTGGGCGATTTACCCAATCGGCTACTTCATGGGCTACCTAAACGGTGCTGTCAGCGACGAGTCGCTGAACGTGATCTATAACATAGCAGACGTCTGGAACAAGATCGCCTTTGGTGTGATCATCTGGAACGTTGCAGTTACTGAATCCGAATCAAAA RAGRLFLLETTRVQGKWKTSLTVSGLVTLIAAVHYFYMRDVWIATGETPTVYRYIDWLITVPLLMIEFYLILRAITAVSGGIFWRLMIGTFVMLVGGYAGEIGYISAWAGFIIGMLGWAYILYEIFAGEASRVAAEKAPPSVQSAFSTMRWIVTIGWAIYPIGYFMGYLNGAVSDESLNVIYNIADVWNKIAFGVIIWNVAVTESESK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGGCTGGACGGCTTTTTCTTCTCGAAACCACCCGCGTGCAAGGC---AAATGGAAGACATCATTGACAGTGTCAGGTCTTGTTACCCTGATCGCGGCTGTGCATTATTTCTACATGCGTGATGTATGGATC------------------------------GCGACA---------------------GGAGAAACACCAACAGTTTATCGTTACATCGATTGG------------------------CTGATCACGGTGCCATTATTGATGATCGAATTTTACTTGATCTTGCGGGCT---------ATT---ACTGCCGTTTCTGGC---GGAATA------------------------------------TTCTGGCGT---CTGATGATTGGTACTTTTGTGATGCTCGTCGGTGGTTATGCTGGCGAA---------ATT------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AGTGCA------------------TGGGCCGGT---TTCATTATCGGCATGCTTGGTTGGGCCTACATTCTGTATGAAATC---------------TTT------GCA---GGTGAAGCCAGCCGAGTAGCCGCGGAA------AAA---GCACCGCCATCAGTG---CAA---TCA---GCC---TTT---TCA---ACAATG---CGTTGGATTGTTACCATT---------------------------------------------------------------GGTTGG---------GCGATTTACCCAATCGGCTACTTCATGGGCTACCTA---------------------------------------AACGGTGCTGTCAGCGACGAGTCGCTGAACGTGATCTATAACATAGCAGACGTCTGGAACAAGATCGCCTTTGGTGTGATCATCTGGAACGTTGCAGTTACTGAA---TCCGAATCAAAA--------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------RAGRLFLLETTRVQG-KWKTSLTVSGLVTLIAAVHYFYMRDVWI----------AT-------GETPTVYRYIDW--------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTFVMLVGGYAGE---I------G--Y-----------I----------------------SA------WAG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--K-APPSV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYPIGYFMGYL-------------NGAVSDESLNVIYNIADVWNKIAFGVIIWNVAVTE-SESK------------------------------------- [III-Alpha3-a]_1105149898974 [III-Alpha3-a] JCVI_ORF_1105149898974_GS008_Coastal_1m jcvi|1105149898974| 1105149898974 JCVI ORF 1105149898974 1105149898974 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 16-nov-03 Coastal/1m_depth/S_26.5_psu/GS008/Newport_Harbor/RI/North_American_East_Coast Atlantic Ocean marine 41.485832 -71.35111 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf GTGCATGAGTATTACGTTAACGGAGGCACTCTTATGAGTTTGATAACAACTAAAGGCGCGAAAGCATCCCTTTTTGCAGCAGCACTCACGTTACTGCCAGCAGCAGCAAATGCAGCTGACGCTTTAACACTGAAGGCTGATGATTATGTGGGGATTTCTTTCTGGCTCATCTCGATGGCATTGGTCGCAGCAACGGCCTTTTTCTTCATCGAAACTACCCGCGTGCAAGGTAAATGGAAGACATCATTGACAGTGTCAGGCCTTGTTACCCTGATCGCAGCTGTGCATTATTTCTACATGCGTGATGTGTGGATCGCGACAGGCGAAACACCAACAGTTTATCGTTACATCGATTGGCTGATCACGGTGCCATTACTGATGATCGAGTTTTACTTAATCTTGCGGGCTATTACTGCCGTTTCTGGCGGAATATTCTGGCGTCTGATGATTGGTACATTTGTGATGCTCGTCGGTGGTTATGCTGGCGAAATTGGCTATATCAGTGCATGGGCCGGTTTCATTATCGGCATGCTTGGTTGGGCCTACATTCTGTATGAAATCTTTGCAGGTGAAGCCAGCCGAGTAGCCGCGGAAAAAGCACCGCCATCAGTGCAATCAGCCTTTTCAACAATGCGTTGGATTGTTACCATTGGTTGGGCGATTTACCCAATCGGCTACTTCATGGGCTACCTAAACGGTGCTGTCAGCGACGAGTCGCTGAACGTGATCTATAACATAGCAGACGTCTGGAATAAGATTGCCTTTGGTGTGATCATCTGGAACGTTGCAGTTACTGAATCCGAATCAAAA VHEYYVNGGTLMSLITTKGAKASLFAAALTLLPAAANAADALTLKADDYVGISFWLISMALVAATAFFFIETTRVQGKWKTSLTVSGLVTLIAAVHYFYMRDVWIATGETPTVYRYIDWLITVPLLMIEFYLILRAITAVSGGIFWRLMIGTFVMLVGGYAGEIGYISAWAGFIIGMLGWAYILYEIFAGEASRVAAEKAPPSVQSAFSTMRWIVTIGWAIYPIGYFMGYLNGAVSDESLNVIYNIADVWNKIAFGVIIWNVAVTESESK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGCATGAGTATTACGTTAACGGAGGCACTCTTATGAGTTTGATAACAACTAAAGGCGCGAAAGCATCCCTTTTTGCAGCAGCACTCACGTTACTGCCAGCAGCAGCAAATGCAGCTGACGCTTTAACACTGAAGGCTGATGATTATGTGGGGATTTCTTTCTGGCTCATCTCGATGGCATTGGTCGCAGCAACGGCCTTTTTCTTCATCGAAACTACCCGCGTGCAAGGT---AAATGGAAGACATCATTGACAGTGTCAGGCCTTGTTACCCTGATCGCAGCTGTGCATTATTTCTACATGCGTGATGTGTGGATC------------------------------GCGACA---------------------GGCGAAACACCAACAGTTTATCGTTACATCGATTGG------------------------CTGATCACGGTGCCATTACTGATGATCGAGTTTTACTTAATCTTGCGGGCT---------ATT---ACTGCCGTTTCTGGC---GGAATA------------------------------------TTCTGGCGT---CTGATGATTGGTACATTTGTGATGCTCGTCGGTGGTTATGCTGGCGAA---------ATT------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AGTGCA------------------TGGGCCGGT---TTCATTATCGGCATGCTTGGTTGGGCCTACATTCTGTATGAAATC---------------TTT------GCA---GGTGAAGCCAGCCGAGTAGCCGCGGAA------AAA---GCACCGCCATCAGTG---CAA---TCA---GCC---TTT---TCA---ACAATG---CGTTGGATTGTTACCATT---------------------------------------------------------------GGTTGG---------GCGATTTACCCAATCGGCTACTTCATGGGCTACCTA---------------------------------------AACGGTGCTGTCAGCGACGAGTCGCTGAACGTGATCTATAACATAGCAGACGTCTGGAATAAGATTGCCTTTGGTGTGATCATCTGGAACGTTGCAGTTACTGAA---TCCGAATCAAAA--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------VHEYYVNGGTLMSLITTKGAKASLFAAALTLLPAAANAADALTLKADDYVGISFWLISMALVAATAFFFIETTRVQG-KWKTSLTVSGLVTLIAAVHYFYMRDVWI----------AT-------GETPTVYRYIDW--------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTFVMLVGGYAGE---I------G--Y-----------I----------------------SA------WAG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--K-APPSV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYPIGYFMGYL-------------NGAVSDESLNVIYNIADVWNKIAFGVIIWNVAVTE-SESK------------------------------------- [III-Alpha3-a]_FJ862922 [III-Alpha3-a] 12_env_samples_FJ862922 gi|226897388|gb|FJ862922| Uncultured bacterium clone 12 putative proteorhodopsin gene, partial cds Uncultured bacterium clone 12 putative proteorhodopsin gene, partial cds FJ862922 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 07-Dec-2009 #na coastal_seawater Atlantic Ocean marine 38.8489 -75.1076 Lightdependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTCGACTGGCTGATCACCGTGCCATTGCTGATGATCGAATTCTACCTGATCTTGCGGGCCATTACAGCCGTTTCCGGCGGTATCTTCTGGCGTCTGATGATTGGTACATTTGTCATGCTGGTCGGTGGTTATGCTGGCGAGATTGGCTATATCAGTGCATGGGCCGGTTTCATCATCGGTATGCTTGGTTGGGCCTACATCTTGTATGAAATCTTTGCAGGTGAAGCCAGCCGTGTTGCGGCAGAGCAGGCACCACCATCAGTGCAGTCAGCCTTTTCAACAATGCGTTGGATTGTGACCATTGGTTGGGCCATCTACGCTCGA VDWLITVPLLMIEFYLILRAITAVSGGIFWRLMIGTFVMLVGGYAGEIGYISAWAGFIIGMLGWAYILYEIFAGEASRVAAEQAPPSVQSAFSTMRWIVTIGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCGACTGG------------------------CTGATCACCGTGCCATTGCTGATGATCGAATTCTACCTGATCTTGCGGGCC---------ATT---ACAGCCGTTTCCGGC---GGTATC------------------------------------TTCTGGCGT---CTGATGATTGGTACATTTGTCATGCTGGTCGGTGGTTATGCTGGCGAG---------ATT------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AGTGCA------------------TGGGCCGGT---TTCATCATCGGTATGCTTGGTTGGGCCTACATCTTGTATGAAATC---------------TTT------GCA---GGTGAAGCCAGCCGTGTTGCGGCAGAG------CAG---GCACCACCATCAGTG---CAG---TCA---GCC---TTT---TCA---ACAATG---CGTTGGATTGTGACCATT---------------------------------------------------------------GGTTGG---------GCCATCTACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTFVMLVGGYAGE---I------G--Y-----------I----------------------SA------WAG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--Q-APPSV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926176 [III-Alpha3-a] RHOMEO_AG_OTU14_u3 gb|KJ926176| Uncultured bacterium cloneRHOMEO AG OTU14 u3 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU14 u3 putative proteorhodopsin gene, partial cds KJ926176 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGTTGATCACAGTGCCATTGCTGATGGTTGAATTCTATCTGATCCTGCGGGCGATTACCGCTGTATCAGGTGGCATTTTCTGGCGTTTGATGATTGGTACATTGGTCATGCTTATCGGCGGTTACGCTGGTGAGGTGGGCTACATCAATGCCTGGGTCGGTTTCATCATCGGTATGCTCGGTTGGGCCTACATCCTGTATGAAATCTTTGCCGGTGAAGCGAGCCGTGTGGCTGCTGAAAAAGCATCACCATCGGTTCAGTCTGCATTCTCAACAATGCGTTGGATTGTGACCATC WLITVPLLMVEFYLILRAITAVSGGIFWRLMIGTLVMLIGGYAGEVGYINAWVGFIIGMLGWAYILYEIFAGEASRVAAEKASPSVQSAFSTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGATCACAGTGCCATTGCTGATGGTTGAATTCTATCTGATCCTGCGGGCG---------ATT---ACCGCTGTATCAGGT---GGCATT------------------------------------TTCTGGCGT---TTGATGATTGGTACATTGGTCATGCTTATCGGCGGTTACGCTGGTGAG---------GTG------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCC------------------TGGGTCGGT---TTCATCATCGGTATGCTCGGTTGGGCCTACATCCTGTATGAAATC---------------TTT------GCC---GGTGAAGCGAGCCGTGTGGCTGCTGAA------AAA---GCATCACCATCGGTT---CAG---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYLILRA---I-TAVSG-GI------------FWR-LMIGTLVMLIGGYAGE---V------G--Y-----------I----------------------NA------WVG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--K-ASPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_DQ203427 [III-Alpha3-a] MedHO102H6_env_samples_DQ203427 gi|77547302|gb|DQ203427| Uncultured bacterium clone MedHO102H6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102H6 predicted proteorhodopsin gene, partial cds DQ203427 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTGATCACAGTGCCATTGCTGATGATTGAATTTTATCTGATCCTGCGGGCGATTACCGCTGTGTCAGGTGGCATTTTCTGGCGTTTGATGATCGGTACTCTGGTCATGCTTATCGGCGGTTACGCTGGTGAGGTAGGCTATATCAACGCATGGGTCGGTTTCATCATCGGTATGCTCGGTTGGGCCTACATCTTGTATGAAATCTTTGCCGGTGAAGCGAGCCGTGTGGCTGCTGAAAAAGCATCACCATCGGTTCAGTCTGCATTCTCAACAATGCGTTGGATTGTGACCATTGGTTGGGCGATCTACCCA RYIDWLITVPLLMIEFYLILRAITAVSGGIFWRLMIGTLVMLIGGYAGEVGYINAWVGFIIGMLGWAYILYEIFAGEASRVAAEKASPSVQSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTGATCACAGTGCCATTGCTGATGATTGAATTTTATCTGATCCTGCGGGCG---------ATT---ACCGCTGTGTCAGGT---GGCATT------------------------------------TTCTGGCGT---TTGATGATCGGTACTCTGGTCATGCTTATCGGCGGTTACGCTGGTGAG---------GTA------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGTCGGT---TTCATCATCGGTATGCTCGGTTGGGCCTACATCTTGTATGAAATC---------------TTT------GCC---GGTGAAGCGAGCCGTGTGGCTGCTGAA------AAA---GCATCACCATCGGTT---CAG---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTGACCATT---------------------------------------------------------------GGTTGG---------GCGATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTLVMLIGGYAGE---V------G--Y-----------I----------------------NA------WVG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--K-ASPSV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha3-a]_DQ203658 [III-Alpha3-a] medHO120H9_env_samples_DQ203658 gi|77547764|gb|DQ203658| Uncultured bacterium clone medHO120H9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120H9 predicted proteorhodopsin gene, partial cds DQ203658 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGACTGGTTGATCACAGTGCCATTGCTGATGATTGAATTTTATCTGATCCTGCGGGCGATTACCGCTGTGTCAGGTGGCATTTTCTGGCGTTTGATGATCGGTACTCTGGTCATGCTTATCGGCGGTTACGCTGGTGAGGTAGGCTATATCAACGCATGGGTCGGTTTCATCATCGGTATGCTCGGTTGGGCCTACATCCTGTATGAAATCTTTGCCGGTGAAGCGAGCCGTGTGGCTGCTGAAAAAGCATCACCATCGGTTCAGTCTGCATTCTCAACAATGCGTTGGATTGTGACCATTGGTTGGGCAATTTACCCA SYIDWLITVPLLMIEFYLILRAITAVSGGIFWRLMIGTLVMLIGGYAGEVGYINAWVGFIIGMLGWAYILYEIFAGEASRVAAEKASPSVQSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGACTGG------------------------TTGATCACAGTGCCATTGCTGATGATTGAATTTTATCTGATCCTGCGGGCG---------ATT---ACCGCTGTGTCAGGT---GGCATT------------------------------------TTCTGGCGT---TTGATGATCGGTACTCTGGTCATGCTTATCGGCGGTTACGCTGGTGAG---------GTA------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGTCGGT---TTCATCATCGGTATGCTCGGTTGGGCCTACATCCTGTATGAAATC---------------TTT------GCC---GGTGAAGCGAGCCGTGTGGCTGCTGAA------AAA---GCATCACCATCGGTT---CAG---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTGACCATT---------------------------------------------------------------GGTTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTLVMLIGGYAGE---V------G--Y-----------I----------------------NA------WVG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--K-ASPSV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha3-a]_DQ203563 [III-Alpha3-a] MedHO1202G3_env_samples_DQ203563 gi|77547574|gb|DQ203563| Uncultured bacterium clone MedHO1202G3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202G3 predicted proteorhodopsin gene, partial cds DQ203563 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTGATTACAGTGCCGTTGCTGATGATTGAATTCTATCTCATTTTGCGTGCGATCACAGCTGTATCAGGCGGTGTCTTCTGGCGCTTGATGATCGGTACATTGGTGATGCTGGTTGGTGGTTACGCTGGTGAAATTGGCTACATCAATGCATGGGCCGGTTTCATTATCGGTATGCTAGGTTGGGCCTATATCCTCTATGAAATCTTCGCTGGTGAAGCCAGCCGTGTGGCGGCTGAAAAAGCCCCTGCATCAGTCCAGTCTGCACTTTCGACAATGCGCTGGATTGTGACCATCGGTTGGGCCATTTATCCA RYIDWLITVPLLMIEFYLILRAITAVSGGVFWRLMIGTLVMLVGGYAGEIGYINAWAGFIIGMLGWAYILYEIFAGEASRVAAEKAPASVQSALSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTGATTACAGTGCCGTTGCTGATGATTGAATTCTATCTCATTTTGCGTGCG---------ATC---ACAGCTGTATCAGGC---GGTGTC------------------------------------TTCTGGCGC---TTGATGATCGGTACATTGGTGATGCTGGTTGGTGGTTACGCTGGTGAA---------ATT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGCCGGT---TTCATTATCGGTATGCTAGGTTGGGCCTATATCCTCTATGAAATC---------------TTC------GCT---GGTGAAGCCAGCCGTGTGGCGGCTGAA------AAA---GCCCCTGCATCAGTC---CAG---TCT---GCA---CTT---TCG---ACAATG---CGCTGGATTGTGACCATC---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMIEFYLILRA---I-TAVSG-GV------------FWR-LMIGTLVMLVGGYAGE---I------G--Y-----------I----------------------NA------WAG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--K-APASV-Q-S-A-L-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha3-a]_DQ422203 [III-Alpha3-a] clone_med-0m-e4_DQ422203 gi|90023926|gb|DQ422203| Uncultured bacterium clone med-0m-e4 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-e4 putative proteorhodopsin gene, partial cds. DQ422203 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATTACAGTGCCGTTGCTGATGATTGAATTCTATCTCATTTTGCGTGCGATCACAGCTGTATCAGGCGGTGTCTTCTGGCGCTTGATGATCGGTACATTGGTGATGCTGGTTGGTGGTTACGCTGGTGAAATTGGCTACATCAATGCATGGGCCGGTTTCATTATCGGTATGCTAGGTTGGGCCTATATCCTCTATGAAATCTTCGCTGGTGAAGCCAGCCGTGTGGCGGCTGAAAAAGCCCCTGCATCAGTCCAGTCTGCATTTTCGACAATGCGCTGGATTGTGACCATCGGTTGGGCGATTTATCCA RYIDWLITVPLLMIEFYLILRAITAVSGGVFWRLMIGTLVMLVGGYAGEIGYINAWAGFIIGMLGWAYILYEIFAGEASRVAAEKAPASVQSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATTACAGTGCCGTTGCTGATGATTGAATTCTATCTCATTTTGCGTGCG---------ATC---ACAGCTGTATCAGGC---GGTGTC------------------------------------TTCTGGCGC---TTGATGATCGGTACATTGGTGATGCTGGTTGGTGGTTACGCTGGTGAA---------ATT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGCCGGT---TTCATTATCGGTATGCTAGGTTGGGCCTATATCCTCTATGAAATC---------------TTC------GCT---GGTGAAGCCAGCCGTGTGGCGGCTGAA------AAA---GCCCCTGCATCAGTC---CAG---TCT---GCA---TTT---TCG---ACAATG---CGCTGGATTGTGACCATC---------------------------------------------------------------GGTTGG---------GCGATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMIEFYLILRA---I-TAVSG-GV------------FWR-LMIGTLVMLVGGYAGE---I------G--Y-----------I----------------------NA------WAG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha3-a]_DQ203594 [III-Alpha3-a] medHO120B10_env_samples_DQ203594 gi|77547636|gb|DQ203594| Uncultured bacterium clone medHO120B10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120B10 predicted proteorhodopsin gene, partial cds DQ203594 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGATTGGCTGATCACCGTGCCATTGCTGATGATCGAATTCTATCTCATCTTGCGTGCGATCACAGCTGTATCAGGCGGTGTCTTCTGGCGTTTGATGATCGGTACCTTGGTGATGCTGGTTGGCGGTTACGCTGGCGAAATTGGCTATATCAATGCATGGGCCGGTTTCATCATCGGTATGCTTGGTTGGGCCTATATCTTGTATGAAATCTTTGCAGGTGAAGCCAGCCGTGTGGCGGCTGAAAAAGCCCCAGCATCAGTCCAGTCTGCATTCTCAACAATGCGCTGGATTGTGACCATCGGGTGGGCAATCTATCCA SYIDWLITVPLLMIEFYLILRAITAVSGGVFWRLMIGTLVMLVGGYAGEIGYINAWAGFIIGMLGWAYILYEIFAGEASRVAAEKAPASVQSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGATTGG------------------------CTGATCACCGTGCCATTGCTGATGATCGAATTCTATCTCATCTTGCGTGCG---------ATC---ACAGCTGTATCAGGC---GGTGTC------------------------------------TTCTGGCGT---TTGATGATCGGTACCTTGGTGATGCTGGTTGGCGGTTACGCTGGCGAA---------ATT------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGCCGGT---TTCATCATCGGTATGCTTGGTTGGGCCTATATCTTGTATGAAATC---------------TTT------GCA---GGTGAAGCCAGCCGTGTGGCGGCTGAA------AAA---GCCCCAGCATCAGTC---CAG---TCT---GCA---TTC---TCA---ACAATG---CGCTGGATTGTGACCATC---------------------------------------------------------------GGGTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMIEFYLILRA---I-TAVSG-GV------------FWR-LMIGTLVMLVGGYAGE---I------G--Y-----------I----------------------NA------WAG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha3-a]_EU915943 [III-Alpha3-a] clone_H015-16_EU915943 gi|229358768|gb|EU915943| Uncultured bacterium clone H015-16 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone H015-16 putative proteorhodopsin gene, partial cds. EU915943 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTGGCCGCTACTGCATTCTTCTTTCTTGAAACGCAGCGCGTTGACGGGAAGTGGAAAACATCACTGACCGTGTCTGGTCTGGTGACTTTGATTGCCGCTGTGCACTATTTCTACATGCGCGACGTCTGGGTAGGTGAAACACCAACCGTGTATCGATACATTGACTGGTTGATCACAGTGCCATTGCTGATGATTGAATTCTATCTCATCTTGCGTGCGATCGCTGTATCAGGCGGTGTCTTCTGGCGTTTGATGATCGGTACATTGGTGATGCTGGTTGGCGGTTACGCTGGCGAAATTGGCTACATCAATGCCTGGGCCGGTTTCATCATCGGTATGCTCGGTTGGGCCTACATCCTGTATGAAATCTTTGCTGGTGAAGCCAGCCGTGTAGCGGCTGAAAAAGCCCCAGCATCGGCGCAGTCTGCATTCTCAACAATGCGTTGGATTGTGACCATCGGGTGGGCCATATAC MLAATAFFFLETQRVDGKWKTSLTVSGLVTLIAAVHYFYMRDVWVGETPTVYRYIDWLITVPLLMIEFYLILRAIAVSGGVFWRLMIGTLVMLVGGYAGEIGYINAWAGFIIGMLGWAYILYEIFAGEASRVAAEKAPASAQSAFSTMRWIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGCATTCTTCTTTCTTGAAACGCAGCGCGTTGACGGG---AAGTGGAAAACATCACTGACCGTGTCTGGTCTGGTGACTTTGATTGCCGCTGTGCACTATTTCTACATGCGCGACGTCTGGGTA---------------------------------------------------------GGTGAAACACCAACCGTGTATCGATACATTGACTGG------------------------TTGATCACAGTGCCATTGCTGATGATTGAATTCTATCTCATCTTGCGTGCG---------ATC------GCTGTATCAGGC---GGTGTC------------------------------------TTCTGGCGT---TTGATGATCGGTACATTGGTGATGCTGGTTGGCGGTTACGCTGGCGAA---------ATT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCC------------------TGGGCCGGT---TTCATCATCGGTATGCTCGGTTGGGCCTACATCCTGTATGAAATC---------------TTT------GCT---GGTGAAGCCAGCCGTGTAGCGGCTGAA------AAA---GCCCCAGCATCGGCG---CAG---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTGACCATC---------------------------------------------------------------GGGTGG---------GCCATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFLETQRVDG-KWKTSLTVSGLVTLIAAVHYFYMRDVWV-------------------GETPTVYRYIDW--------LITVPLLMIEFYLILRA---I--AVSG-GV------------FWR-LMIGTLVMLVGGYAGE---I------G--Y-----------I----------------------NA------WAG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--K-APASA-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Alpha3-HTCC2255]_FJ560769 [III-Alpha3-HTCC2255] HEL28_env_samples_FJ560769 gi|223868685|gb|FJ560769| Uncultured microorganism clone HEL28 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL28 putative proteorhodopsin gene, partial cds FJ560769 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/HTCC2255 Rhodobacterales-like]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 HTCC2255 Rhodobacterales-like proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTTTACGCGCAATTACTAACGTATCGCAAGGTATCTTCTGGCGTTTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAAATCGGTTACATTAGTGCAACTTTAGGATTTATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATCTTTGCAGGTGAAGCTAGTAAAGTTGCTGCAGATGAGGCCCCGGCTTCTGTTCAATCTAACTTGGCTCAA TVPLLMVEFYLILRAITNVSQGIFWRLMIGTVVMLVGGYAGEIGYISATLGFIIGMLGWAYILYEIFAGEASKVAADEAPASVQSNLAQ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTTTACGCGCA---------ATT---ACTAACGTATCGCAA---GGTATC------------------------------------TTCTGGCGT---TTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAA---------ATC------------------GGT------TAC---------------------------------ATT------------------------------------------------------------------AGTGCA------------------ACTTTAGGA---TTTATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGTAAAGTTGCTGCAGAT------GAG---GCCCCGGCTTCTGTT---CAA---TCT---AAC---TTG---GCT---CAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMVEFYLILRA---I-TNVSQ-GI------------FWR-LMIGTVVMLVGGYAGE---I------G--Y-----------I----------------------SA------TLG-FIIGMLGWAYILYEI-----F--A-GEASKVAAD--E-APASV-Q-S-N-L-A-Q---------------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-HTCC2255]_FJ560799 [III-Alpha3-HTCC2255] HEL72_env_samples_FJ560799 gi|223868745|gb|FJ560799| Uncultured microorganism clone HEL72 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL72 putative proteorhodopsin gene, partial cds FJ560799 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/HTCC2255 Rhodobacterales-like]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 HTCC2255 Rhodobacterales-like proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTTTACGCGCAATTACTAACGTATCGCAAGGTATCTTCTGGCGCTTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAAATTGGTTATATCAGTGCAACTTTAGGATTCATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATCTTTGCAGGTGAAGCTAGTAAAGTTGCTGCAGATGAGGCCCCGGCTTCTGTTCAATCTAGCTTGGCTCAA TVPLLMVEFYLILRAITNVSQGIFWRLMIGTVVMLVGGYAGEIGYISATLGFIIGMLGWAYILYEIFAGEASKVAADEAPASVQSSLAQ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTTTACGCGCA---------ATT---ACTAACGTATCGCAA---GGTATC------------------------------------TTCTGGCGC---TTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAA---------ATT------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------AGTGCA------------------ACTTTAGGA---TTCATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGTAAAGTTGCTGCAGAT------GAG---GCCCCGGCTTCTGTT---CAA---TCT---AGC---TTG---GCT---CAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMVEFYLILRA---I-TNVSQ-GI------------FWR-LMIGTVVMLVGGYAGE---I------G--Y-----------I----------------------SA------TLG-FIIGMLGWAYILYEI-----F--A-GEASKVAAD--E-APASV-Q-S-S-L-A-Q---------------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-HTCC2255]_FJ560795 [III-Alpha3-HTCC2255] HEL67_env_samples_FJ560795 gi|223868737|gb|FJ560795| Uncultured microorganism clone HEL67 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL67 putative proteorhodopsin gene, partial cds FJ560795 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/HTCC2255 Rhodobacterales-like]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 HTCC2255 Rhodobacterales-like proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTTTACGCGCAATTACTAACGTATCGCAAGGTATCTTCTGGCGCTTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAAATTGGTTATATCAGTGCAACTTTAGGATTCATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATCTTTGCAGGTGAGGCTAGTAAAGTTGCTGCAGATGAGGCCCCGGCTTCTGTTCAATCAAGCGGTTCTCAA TVPLLMVEFYLILRAITNVSQGIFWRLMIGTVVMLVGGYAGEIGYISATLGFIIGMLGWAYILYEIFAGEASKVAADEAPASVQSSGSQ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTTTACGCGCA---------ATT---ACTAACGTATCGCAA---GGTATC------------------------------------TTCTGGCGC---TTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAA---------ATT------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------AGTGCA------------------ACTTTAGGA---TTCATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATC---------------TTT------GCA---GGTGAGGCTAGTAAAGTTGCTGCAGAT------GAG---GCCCCGGCTTCTGTT---CAA---TCA---AGC---GGT---TCT---CAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMVEFYLILRA---I-TNVSQ-GI------------FWR-LMIGTVVMLVGGYAGE---I------G--Y-----------I----------------------SA------TLG-FIIGMLGWAYILYEI-----F--A-GEASKVAAD--E-APASV-Q-S-S-G-S-Q---------------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-HTCC2255]_FJ560787 [III-Alpha3-HTCC2255] HEL57_env_samples_FJ560787 gi|223868721|gb|FJ560787| Uncultured microorganism clone HEL57 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL57 putative proteorhodopsin gene, partial cds FJ560787 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/HTCC2255 Rhodobacterales-like]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 HTCC2255 Rhodobacterales-like proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTTTACGCGCAATTACTAACGTATCGCAAGGTATCTTCTGGCGCTTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAAATTGGTTATATCAGTGCAACTTTAGGATTCATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATCTTTGCAGGTGAAGCTAGTAAAGTTGCTGCAGATGAGGCCCCGGCTTCTGTTCAATCAAAAATTGCTCAA TVPLLMVEFYLILRAITNVSQGIFWRLMIGTVVMLVGGYAGEIGYISATLGFIIGMLGWAYILYEIFAGEASKVAADEAPASVQSKIAQ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTTTACGCGCA---------ATT---ACTAACGTATCGCAA---GGTATC------------------------------------TTCTGGCGC---TTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAA---------ATT------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------AGTGCA------------------ACTTTAGGA---TTCATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGTAAAGTTGCTGCAGAT------GAG---GCCCCGGCTTCTGTT---CAA---TCA---AAA---ATT---GCT---CAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMVEFYLILRA---I-TNVSQ-GI------------FWR-LMIGTVVMLVGGYAGE---I------G--Y-----------I----------------------SA------TLG-FIIGMLGWAYILYEI-----F--A-GEASKVAAD--E-APASV-Q-S-K-I-A-Q---------------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-HTCC2255]_FJ560776 [III-Alpha3-HTCC2255] HEL37_env_samples_FJ560776 gi|223868699|gb|FJ560776| Uncultured microorganism clone HEL37 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL37 putative proteorhodopsin gene, partial cds FJ560776 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/HTCC2255 Rhodobacterales-like]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 HTCC2255 Rhodobacterales-like proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTTTACGCGCAATTACTAACGTATCGCAAGGTATCTTCTGGCGCTTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAGATTGGTTATATCAGTGCAACTTTAGGATTCATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATCTTTGCAGGTGAAGCTAGTAAAGTTGCTGCAGATGAGGCCCCGGCTTCTGTTCAATCTAAAATTGGCTCAACAATGCGT TVPLLMVEFYLILRAITNVSQGIFWRLMIGTVVMLVGGYAGEIGYISATLGFIIGMLGWAYILYEIFAGEASKVAADEAPASVQSKIGSTMR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTTTACGCGCA---------ATT---ACTAACGTATCGCAA---GGTATC------------------------------------TTCTGGCGC---TTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAG---------ATT------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------AGTGCA------------------ACTTTAGGA---TTCATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGTAAAGTTGCTGCAGAT------GAG---GCCCCGGCTTCTGTT---CAA---TCT---AAA---ATTGGCTCA---ACAATG---CGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMVEFYLILRA---I-TNVSQ-GI------------FWR-LMIGTVVMLVGGYAGE---I------G--Y-----------I----------------------SA------TLG-FIIGMLGWAYILYEI-----F--A-GEASKVAAD--E-APASV-Q-S-K-IGS-TM-R------------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-HTCC2255]_FJ560837 [III-Alpha3-HTCC2255] HEL123_env_samples_FJ560837 gi|223868821|gb|FJ560837| Uncultured microorganism clone HEL123 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL123 putative proteorhodopsin gene, partial cds FJ560837 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/HTCC2255 Rhodobacterales-like]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 HTCC2255 Rhodobacterales-like proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTTTACGCGCAATTACTAACGTATCGCAAGGTATCTTCTGGCGCTTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAAATTGGTTATATCAGTGCAACTTTAGGATTCATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATCTTTGCAGGTGAAGCTAGTAAAGTTGCTGCAGATGAGGCCCCGGCTTCTGTTCAATACAAGCGTTTCTCAACAATGCGT TVPLLMVEFYLILRAITNVSQGIFWRLMIGTVVMLVGGYAGEIGYISATLGFIIGMLGWAYILYEIFAGEASKVAADEAPASVQYKRFSTMR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTTTACGCGCA---------ATT---ACTAACGTATCGCAA---GGTATC------------------------------------TTCTGGCGC---TTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAA---------ATT------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------AGTGCA------------------ACTTTAGGA---TTCATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGTAAAGTTGCTGCAGAT------GAG---GCCCCGGCTTCTGTT---CAATACAAG---CGT---TTC---TCA---ACAATG---CGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMVEFYLILRA---I-TNVSQ-GI------------FWR-LMIGTVVMLVGGYAGE---I------G--Y-----------I----------------------SA------TLG-FIIGMLGWAYILYEI-----F--A-GEASKVAAD--E-APASV-QYK-R-F-S-TM-R------------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-HTCC2255]_FJ560847 [III-Alpha3-HTCC2255] HEL134_env_samples_FJ560847 gi|223868841|gb|FJ560847| Uncultured microorganism clone HEL134 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL134 putative proteorhodopsin gene, partial cds FJ560847 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/HTCC2255 Rhodobacterales-like]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 HTCC2255 Rhodobacterales-like proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTTTACGCGCAATTACTAACGTATCGCAAGGTATCTTCTGGCGCTTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGCGAGATCGGTTATATCAGTGCAACCTTAGGATTCATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATCTTTGCAGGTGAAGCTAGTAAAGTTGCTGCAGATGAGGCCCCGGCTTCTGTTCAATACAAGCGTTTCTCAACAATGCGT TVPLLMVEFYLILRAITNVSQGIFWRLMIGTVVMLVGGYAGEIGYISATLGFIIGMLGWAYILYEIFAGEASKVAADEAPASVQYKRFSTMR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTTTACGCGCA---------ATT---ACTAACGTATCGCAA---GGTATC------------------------------------TTCTGGCGC---TTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGCGAG---------ATC------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------AGTGCA------------------ACCTTAGGA---TTCATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGTAAAGTTGCTGCAGAT------GAG---GCCCCGGCTTCTGTT---CAATACAAG---CGT---TTC---TCA---ACAATG---CGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMVEFYLILRA---I-TNVSQ-GI------------FWR-LMIGTVVMLVGGYAGE---I------G--Y-----------I----------------------SA------TLG-FIIGMLGWAYILYEI-----F--A-GEASKVAAD--E-APASV-QYK-R-F-S-TM-R------------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-HTCC2255]_FJ560778 [III-Alpha3-HTCC2255] HEL40_env_samples_FJ560778 gi|223868703|gb|FJ560778| Uncultured microorganism clone HEL40 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL40 putative proteorhodopsin gene, partial cds FJ560778 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/HTCC2255 Rhodobacterales-like]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 HTCC2255 Rhodobacterales-like proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTCTACGCGCAATTACTAACGTATCGCAAGGTATCTTCTGGCGCTTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAGATCGGTTATATCAGTGCAACTTTAGGATTCATTATTGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATCTTTGCAGGTGAAGCTAGAAAAGTTGCTGCAGATGAGGCCCCGGCTTCTGTTCCCATT TVPLLMVEFYLILRAITNVSQGIFWRLMIGTVVMLVGGYAGEIGYISATLGFIIGMLGWAYILYEIFAGEARKVAADEAPASVPI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTCTACGCGCA---------ATT---ACTAACGTATCGCAA---GGTATC------------------------------------TTCTGGCGC---TTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAG---------ATC------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------AGTGCA------------------ACTTTAGGA---TTCATTATTGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGAAAAGTTGCTGCAGAT------GAG---GCCCCGGCTTCTGTT---CCC---ATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMVEFYLILRA---I-TNVSQ-GI------------FWR-LMIGTVVMLVGGYAGE---I------G--Y-----------I----------------------SA------TLG-FIIGMLGWAYILYEI-----F--A-GEARKVAAD--E-APASV-P-I------------------------------------------------------------------------------------------------------------------------------------------------ [III-Alpha3-HTCC2255]_FJ560805 [III-Alpha3-HTCC2255] HEL79_env_samples_FJ560805 gi|223868757|gb|FJ560805| Uncultured microorganism clone HEL79 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL79 putative proteorhodopsin gene, partial cds FJ560805 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/HTCC2255 Rhodobacterales-like]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 HTCC2255 Rhodobacterales-like proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTCTACGCGCAATTACTAACGTATCGCAAGGTATCTTCTGGCGCTTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAGATCGGTTATATCAGTGCAACTTTAGGATTCATTATTGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATCTTTGCAGGTGAAGCTAGTAAAGTTGCTGCAGATGAGGCCCCGGCTTCTGTTCAATCAGCTTTCTCAACAATGCGTTGG TVPLLMVEFYLILRAITNVSQGIFWRLMIGTVVMLVGGYAGEIGYISATLGFIIGMLGWAYILYEIFAGEASKVAADEAPASVQSAFSTMRW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTCTACGCGCA---------ATT---ACTAACGTATCGCAA---GGTATC------------------------------------TTCTGGCGC---TTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAG---------ATC------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------AGTGCA------------------ACTTTAGGA---TTCATTATTGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGTAAAGTTGCTGCAGAT------GAG---GCCCCGGCTTCTGTT---CAA---TCA---GCT---TTC---TCA---ACAATG---CGTTGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMVEFYLILRA---I-TNVSQ-GI------------FWR-LMIGTVVMLVGGYAGE---I------G--Y-----------I----------------------SA------TLG-FIIGMLGWAYILYEI-----F--A-GEASKVAAD--E-APASV-Q-S-A-F-S-TM-RW------------------------------------------------------------------------------------------------------------------------------------ [III-Alpha3-HTCC2255]_FJ560800 [III-Alpha3-HTCC2255] HEL73_env_samples_FJ560800 gi|223868747|gb|FJ560800| Uncultured microorganism clone HEL73 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL73 putative proteorhodopsin gene, partial cds FJ560800 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/HTCC2255 Rhodobacterales-like]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 HTCC2255 Rhodobacterales-like proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTTCCATTATTGATGGTAGAGTTTTATTTGATTTTACGCGCAATTACTAACGTATCGCAAGGTATCTTCTGGCGCTTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAGATCGGTTATATCAGTGCAACTTTAGGATTCATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATTTTTGCAGGTGAAGCTAGTAAAGTTGCTGCAGATGAGGCCCCGGCTTCTGTTCAATCAGCGGGCTCAACAATGCGTTGG TVPLLMVEFYLILRAITNVSQGIFWRLMIGTVVMLVGGYAGEIGYISATLGFIIGMLGWAYILYEIFAGEASKVAADEAPASVQSAGSTMRW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTTCCATTATTGATGGTAGAGTTTTATTTGATTTTACGCGCA---------ATT---ACTAACGTATCGCAA---GGTATC------------------------------------TTCTGGCGC---TTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAG---------ATC------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------AGTGCA------------------ACTTTAGGA---TTCATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATT---------------TTT------GCA---GGTGAAGCTAGTAAAGTTGCTGCAGAT------GAG---GCCCCGGCTTCTGTT---CAA---TCA---GCG---GGC---TCA---ACAATG---CGTTGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMVEFYLILRA---I-TNVSQ-GI------------FWR-LMIGTVVMLVGGYAGE---I------G--Y-----------I----------------------SA------TLG-FIIGMLGWAYILYEI-----F--A-GEASKVAAD--E-APASV-Q-S-A-G-S-TM-RW------------------------------------------------------------------------------------------------------------------------------------ [III-Alpha3-HTCC2255]_FJ560777 [III-Alpha3-HTCC2255] HEL39_env_samples_FJ560777 gi|223868701|gb|FJ560777| Uncultured microorganism clone HEL39 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL39 putative proteorhodopsin gene, partial cds FJ560777 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/HTCC2255 Rhodobacterales-like]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 HTCC2255 Rhodobacterales-like proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTTTACGCGCAATTACTAACGTATCGCAAGGTATCTTCTGGCGCTTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAGATTGGTTATATCAGTGCAACTTTAGGATTCATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATCTTTGCAGGTGAAGCTAGTAAAGTTGCTGCAGATGAGGCCCCGGCTTCTGTTCACATC TVPLLMVEFYLILRAITNVSQGIFWRLMIGTVVMLVGGYAGEIGYISATLGFIIGMLGWAYILYEIFAGEASKVAADEAPASVHI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTTTACGCGCA---------ATT---ACTAACGTATCGCAA---GGTATC------------------------------------TTCTGGCGC---TTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAG---------ATT------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------AGTGCA------------------ACTTTAGGA---TTCATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGTAAAGTTGCTGCAGAT------GAG---GCCCCGGCTTCTGTT---CAC---ATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMVEFYLILRA---I-TNVSQ-GI------------FWR-LMIGTVVMLVGGYAGE---I------G--Y-----------I----------------------SA------TLG-FIIGMLGWAYILYEI-----F--A-GEASKVAAD--E-APASV-H-I------------------------------------------------------------------------------------------------------------------------------------------------ [III-Alpha3-HTCC2255]_FJ560816 [III-Alpha3-HTCC2255] HEL96_env_samples_FJ560816 gi|223868779|gb|FJ560816| Uncultured microorganism clone HEL96 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL96 putative proteorhodopsin gene, partial cds FJ560816 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/HTCC2255 Rhodobacterales-like]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 HTCC2255 Rhodobacterales-like proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTTTACGCGCAATTACTAACGTATCGCAAGGTATCTTCTGGCGCTTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAGATCGGTTATATCAGTGCAACTTTAGGATTCATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATCTTTGCAGGTGAAGCTAGTAAAGTTGCTGCAGATGAGGCCCCGGCTTCTGTTCGAATCAGCTTTCTCAAC TVPLLMVEFYLILRAITNVSQGIFWRLMIGTVVMLVGGYAGEIGYISATLGFIIGMLGWAYILYEIFAGEASKVAADEAPASVRISFLN ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTTTACGCGCA---------ATT---ACTAACGTATCGCAA---GGTATC------------------------------------TTCTGGCGC---TTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAG---------ATC------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------AGTGCA------------------ACTTTAGGA---TTCATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGTAAAGTTGCTGCAGAT------GAG---GCCCCGGCTTCTGTT---CGA---ATC---AGC---TTT---CTC---AAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMVEFYLILRA---I-TNVSQ-GI------------FWR-LMIGTVVMLVGGYAGE---I------G--Y-----------I----------------------SA------TLG-FIIGMLGWAYILYEI-----F--A-GEASKVAAD--E-APASV-R-I-S-F-L-N---------------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-HTCC2255]_FJ560836 [III-Alpha3-HTCC2255] HEL122_env_samples_FJ560836 gi|223868819|gb|FJ560836| Uncultured microorganism clone HEL122 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL122 putative proteorhodopsin gene, partial cds FJ560836 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/HTCC2255 Rhodobacterales-like]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 HTCC2255 Rhodobacterales-like proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTTTACGCGCAATTACTAACGTATCGCAAGGTATCTTCTGGCGCTTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAAATTGGTTATATCAGTGCAACTTTAGGATTCATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATCTTTGCAGGTGAAGCTAGTAAAGTTGCTGCAGATGAGGCCCCGGCTTCTGTTCAATACAAGCGGTTTCTCAACAATGCG TVPLLMVEFYLILRAITNVSQGIFWRLMIGTVVMLVGGYAGEIGYISATLGFIIGMLGWAYILYEIFAGEASKVAADEAPASVQYKRFLNNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTTTACGCGCA---------ATT---ACTAACGTATCGCAA---GGTATC------------------------------------TTCTGGCGC---TTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAA---------ATT------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------AGTGCA------------------ACTTTAGGA---TTCATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGTAAAGTTGCTGCAGAT------GAG---GCCCCGGCTTCTGTT---CAA---TAC---AAG------------------------CGGTTTCTCAACAATGCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMVEFYLILRA---I-TNVSQ-GI------------FWR-LMIGTVVMLVGGYAGE---I------G--Y-----------I----------------------SA------TLG-FIIGMLGWAYILYEI-----F--A-GEASKVAAD--E-APASV-Q-Y-K--------RFLNNA-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-HTCC2255]_FJ560792 [III-Alpha3-HTCC2255] HEL64_env_samples_FJ560792 gi|223868731|gb|FJ560792| Uncultured microorganism clone HEL64 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL64 putative proteorhodopsin gene, partial cds FJ560792 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/HTCC2255 Rhodobacterales-like]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 HTCC2255 Rhodobacterales-like proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTTTACGCGCAATTACTAACGTATCGCAAGGTATCTTCTGGCGTTTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAAATCGGTTATATTAGTGCAACTTTAGGATTTATTATCGGTATGCTTGGTTGGGCTTACATCCTGTATGAAATCTTTGCAGGTGAAGCTAGTAAAGTTGCTGCAGATGAGGCTCCGGCTTCTGTTCAATCAGCTTGTCTCAACAATGCGTTG TVPLLMVEFYLILRAITNVSQGIFWRLMIGTVVMLVGGYAGEIGYISATLGFIIGMLGWAYILYEIFAGEASKVAADEAPASVQSACLNNAL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTTTACGCGCA---------ATT---ACTAACGTATCGCAA---GGTATC------------------------------------TTCTGGCGT---TTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAA---------ATC------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------AGTGCA------------------ACTTTAGGA---TTTATTATCGGTATGCTTGGTTGGGCTTACATCCTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGTAAAGTTGCTGCAGAT------GAG---GCTCCGGCTTCTGTT---CAA---TCA---GCT------------------------------------TGTCTC---------------------------------------------------------------AACAAT---------GCGTTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMVEFYLILRA---I-TNVSQ-GI------------FWR-LMIGTVVMLVGGYAGE---I------G--Y-----------I----------------------SA------TLG-FIIGMLGWAYILYEI-----F--A-GEASKVAAD--E-APASV-Q-S-A------------CL---------------------NN---AL---------------------------------------------------------------------------------------------------- [III-Alpha3-HTCC2255]_FJ560754 [III-Alpha3-HTCC2255] HEL6_env_samples_FJ560754 gi|223868655|gb|FJ560754| Uncultured microorganism clone HEL6 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL6 putative proteorhodopsin gene, partial cds FJ560754 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/HTCC2255 Rhodobacterales-like]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 HTCC2255 Rhodobacterales-like proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTTTACGCGCAATTACTAACGTATCGCAAGGTATCTTCTGGCGCTTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAGATTGGTTATATCAGTGCAACTTTAGGATTCATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATCTTTGCAGGTGAAGCTAGTAAAGTTGCTGCAGATGAGGCCCCGGCTTCTGTTCAATCAGCTTGTCTCAACAATGCGTTG TVPLLMVEFYLILRAITNVSQGIFWRLMIGTVVMLVGGYAGEIGYISATLGFIIGMLGWAYILYEIFAGEASKVAADEAPASVQSACLNNAL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTTTACGCGCA---------ATT---ACTAACGTATCGCAA---GGTATC------------------------------------TTCTGGCGC---TTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAG---------ATT------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------AGTGCA------------------ACTTTAGGA---TTCATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGTAAAGTTGCTGCAGAT------GAG---GCCCCGGCTTCTGTT---CAA---TCA---GCT------------------------------------TGTCTC---------------------------------------------------------------AACAAT---------GCGTTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMVEFYLILRA---I-TNVSQ-GI------------FWR-LMIGTVVMLVGGYAGE---I------G--Y-----------I----------------------SA------TLG-FIIGMLGWAYILYEI-----F--A-GEASKVAAD--E-APASV-Q-S-A------------CL---------------------NN---AL---------------------------------------------------------------------------------------------------- [III-Alpha3-HTCC2255]_FJ560849 [III-Alpha3-HTCC2255] HEL137_env_samples_FJ560849 gi|223868845|gb|FJ560849| Uncultured microorganism clone HEL137 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL137 putative proteorhodopsin gene, partial cds FJ560849 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/HTCC2255 Rhodobacterales-like]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 HTCC2255 Rhodobacterales-like proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTTTACGCGCAATTACTAACGTATCGCAAGGTATCTTCTGGCGCTTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAAATTGGTTATATCAGTGCAACTTTAGGATTCATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATCTTTGCAGGTGAAGCTAGTAAAGTTGCTGCAGATGAGGCCCCGGCTTCTGTTCAATCAGCGTTTCTCAACAATGCGTTG TVPLLMVEFYLILRAITNVSQGIFWRLMIGTVVMLVGGYAGEIGYISATLGFIIGMLGWAYILYEIFAGEASKVAADEAPASVQSAFLNNAL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTTTACGCGCA---------ATT---ACTAACGTATCGCAA---GGTATC------------------------------------TTCTGGCGC---TTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAA---------ATT------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------AGTGCA------------------ACTTTAGGA---TTCATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGTAAAGTTGCTGCAGAT------GAG---GCCCCGGCTTCTGTT---CAA---TCA---GCG---TTT---CTC---AACAAT---GCGTTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMVEFYLILRA---I-TNVSQ-GI------------FWR-LMIGTVVMLVGGYAGE---I------G--Y-----------I----------------------SA------TLG-FIIGMLGWAYILYEI-----F--A-GEASKVAAD--E-APASV-Q-S-A-F-L-NN-AL------------------------------------------------------------------------------------------------------------------------------------ [III-Alpha3-HTCC2255]_FJ560820 [III-Alpha3-HTCC2255] HEL100_env_samples_FJ560820 gi|223868787|gb|FJ560820| Uncultured microorganism clone HEL100 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL100 putative proteorhodopsin gene, partial cds FJ560820 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/HTCC2255 Rhodobacterales-like]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 HTCC2255 Rhodobacterales-like proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTTTACGCGCAATTACTAACGTATCGCAAGGTATCTTCTGGCGCTTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAGATTGGTTATATCAGTGCAACTTTAGGATTCATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATCTTTGCAGGTGAAGCTAGTAAAGTTGCTGCAGATGAGGCCCCGGCTTCTGTTCAATCAGCGTTTCTCAACAATGCGTTG TVPLLMVEFYLILRAITNVSQGIFWRLMIGTVVMLVGGYAGEIGYISATLGFIIGMLGWAYILYEIFAGEASKVAADEAPASVQSAFLNNAL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTTTACGCGCA---------ATT---ACTAACGTATCGCAA---GGTATC------------------------------------TTCTGGCGC---TTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAG---------ATT------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------AGTGCA------------------ACTTTAGGA---TTCATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGTAAAGTTGCTGCAGAT------GAG---GCCCCGGCTTCTGTT---CAA---TCA---GCG---TTT---CTC---AACAAT---GCGTTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMVEFYLILRA---I-TNVSQ-GI------------FWR-LMIGTVVMLVGGYAGE---I------G--Y-----------I----------------------SA------TLG-FIIGMLGWAYILYEI-----F--A-GEASKVAAD--E-APASV-Q-S-A-F-L-NN-AL------------------------------------------------------------------------------------------------------------------------------------ [III-Alpha3-HTCC2255]_FJ560830 [III-Alpha3-HTCC2255] HEL114_env_samples_FJ560830 gi|223868807|gb|FJ560830| Uncultured microorganism clone HEL114 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL114 putative proteorhodopsin gene, partial cds FJ560830 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/HTCC2255 Rhodobacterales-like]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 HTCC2255 Rhodobacterales-like proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTTCCATTATTGATGGTAGAGTTTTATGTAATTTTACGCGCAATTACTAACGTATCGCAAGGTATCTTCTGGCGCTTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAGATTGGCTATATCAGTGCAACTTTAGGATTCATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATCTTTGCAGGTGAAGCTAGTAAAGTTGCTGCAGATGAGGCCCCGGCTTCTGTTCAATCAGCGTTTCTCAACAATGCGTTG TVPLLMVEFYVILRAITNVSQGIFWRLMIGTVVMLVGGYAGEIGYISATLGFIIGMLGWAYILYEIFAGEASKVAADEAPASVQSAFLNNAL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTTCCATTATTGATGGTAGAGTTTTATGTAATTTTACGCGCA---------ATT---ACTAACGTATCGCAA---GGTATC------------------------------------TTCTGGCGC---TTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAG---------ATT------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AGTGCA------------------ACTTTAGGA---TTCATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGTAAAGTTGCTGCAGAT------GAG---GCCCCGGCTTCTGTT---CAA---TCA---GCG---TTT---CTC---AACAAT---GCGTTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMVEFYVILRA---I-TNVSQ-GI------------FWR-LMIGTVVMLVGGYAGE---I------G--Y-----------I----------------------SA------TLG-FIIGMLGWAYILYEI-----F--A-GEASKVAAD--E-APASV-Q-S-A-F-L-NN-AL------------------------------------------------------------------------------------------------------------------------------------ [III-Alpha3-HTCC2255]_KJ926120 [III-Alpha3-HTCC2255] BOUM_OTU033_env_samples gb|KJ926120| Uncultured bacterium clone BOUM OTU033 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU033 putative proteorhodopsin gene, partial cds KJ926120 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/HTCC2255 Rhodobacterales-like]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 HTCC2255 Rhodobacterales-like proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 31.0165 -10.0357 #na #na #na #na #na GTTGACTGGTTAATTACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTTTACGCGCAATTACTAACGTATCGCAAGGTATCTTCTGGCGCTTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAAATTGGTTATATCAGTGCAACTTTAGGATTCATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATCTTTGCAGGTGAAGCTAGTAAAGTTGCTGCAGATGAGGCCCCGGCTTCTGTTCAATCAGCTTTCTCAACAATGCGTTGGATTGTGACGATTGGTTGGGCGATTTAC VDWLITVPLLMVEFYLILRAITNVSQGIFWRLMIGTVVMLVGGYAGEIGYISATLGFIIGMLGWAYILYEIFAGEASKVAADEAPASVQSAFSTMRWIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGACTGG------------------------TTAATTACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTTTACGCGCA---------ATT---ACTAACGTATCGCAA---GGTATC------------------------------------TTCTGGCGC---TTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAA---------ATT------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------AGTGCA------------------ACTTTAGGA---TTCATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGTAAAGTTGCTGCAGAT------GAG---GCCCCGGCTTCTGTT---CAA---TCA---GCT---TTC---TCA---ACAATG---CGTTGGATTGTGACGATT---------------------------------------------------------------GGTTGG---------GCGATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPLLMVEFYLILRA---I-TNVSQ-GI------------FWR-LMIGTVVMLVGGYAGE---I------G--Y-----------I----------------------SA------TLG-FIIGMLGWAYILYEI-----F--A-GEASKVAAD--E-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Alpha3-HTCC2255]_FJ560798 [III-Alpha3-HTCC2255] HEL70_env_samples_FJ560798 gi|223868743|gb|FJ560798| Uncultured microorganism clone HEL70 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL70 putative proteorhodopsin gene, partial cds FJ560798 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/HTCC2255 Rhodobacterales-like]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 HTCC2255 Rhodobacterales-like proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTTTACGCGCAACTACTAACGTATCGCAAGGTATCTTCTGGCGCTTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAGATTGGTTATATCAGTGCAACTTTAGGATTCATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATCTTTGCAGGTGAAGCTAGTAAAGTTGCTGCAGATGAGGCCCCGGCTTCTGTTCAATCAGCTTTCTCAACAATGCGTTGG TVPLLMVEFYLILRATTNVSQGIFWRLMIGTVVMLVGGYAGEIGYISATLGFIIGMLGWAYILYEIFAGEASKVAADEAPASVQSAFSTMRW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTTTACGCGCA---------ACT---ACTAACGTATCGCAA---GGTATC------------------------------------TTCTGGCGC---TTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAG---------ATT------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------AGTGCA------------------ACTTTAGGA---TTCATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGTAAAGTTGCTGCAGAT------GAG---GCCCCGGCTTCTGTT---CAA---TCA---GCT---TTC---TCA---ACAATG---CGTTGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMVEFYLILRA---T-TNVSQ-GI------------FWR-LMIGTVVMLVGGYAGE---I------G--Y-----------I----------------------SA------TLG-FIIGMLGWAYILYEI-----F--A-GEASKVAAD--E-APASV-Q-S-A-F-S-TM-RW------------------------------------------------------------------------------------------------------------------------------------ [III-Alpha3-HTCC2255]_FJ862954 [III-Alpha3-HTCC2255] clone_10_FJ862954 gi|226897308|gb|FJ862954| Uncultured bacterium clone 10 putative proteorhodopsin mRNA, partial cds. Uncultured bacterium clone 10 putative proteorhodopsin mRNA, partial cds. FJ862954 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/HTCC2255 Rhodobacterales-like]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 HTCC2255 Rhodobacterales-like proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 07-DEC-2009 #na coastal seawater Atlantic Ocean marine 38.8489 -75.1076 Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTTGATTGGTTAATTACTGTTCCATTGTTGATGGTAGAGTTTTATTTAATTTTACGCGCAATTACTAACGTATCGCAAGGTATCTTCTGGCGTTTAATGATTGGTACAGTTGTAATGCTCGTAGGTGGGTATGCTGGTGAAATCGGTTATATTAGTGCAACTTTAGGATTTATTATAGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATCTTTGCGGGTGAAGCTAGTAAAGTTGCTGCAGATGAGGCTCCGGCTTCTGTTCAATCAGCTTTCTCAACAATGCGTTGGATTGTGACGATTGGCTGGGCCATATACGCTCGA VDWLITVPLLMVEFYLILRAITNVSQGIFWRLMIGTVVMLVGGYAGEIGYISATLGFIIGMLGWAYILYEIFAGEASKVAADEAPASVQSAFSTMRWIVTIGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGATTGG------------------------TTAATTACTGTTCCATTGTTGATGGTAGAGTTTTATTTAATTTTACGCGCA---------ATT---ACTAACGTATCGCAA---GGTATC------------------------------------TTCTGGCGT---TTAATGATTGGTACAGTTGTAATGCTCGTAGGTGGGTATGCTGGTGAA---------ATC------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------AGTGCA------------------ACTTTAGGA---TTTATTATAGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATC---------------TTT------GCG---GGTGAAGCTAGTAAAGTTGCTGCAGAT------GAG---GCTCCGGCTTCTGTT---CAA---TCA---GCT---TTC---TCA---ACAATG---CGTTGGATTGTGACGATT---------------------------------------------------------------GGCTGG---------GCCATATACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPLLMVEFYLILRA---I-TNVSQ-GI------------FWR-LMIGTVVMLVGGYAGE---I------G--Y-----------I----------------------SA------TLG-FIIGMLGWAYILYEI-----F--A-GEASKVAAD--E-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [III-Alpha3-HTCC2255]_FJ560842 [III-Alpha3-HTCC2255] HEL129_env_samples_FJ560842 gi|223868831|gb|FJ560842| Uncultured microorganism clone HEL129 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL129 putative proteorhodopsin gene, partial cds FJ560842 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/HTCC2255 Rhodobacterales-like]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 HTCC2255 Rhodobacterales-like proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTTTACGCGCAATTACTAACGTATCGCAAGGTATCTTCTGGCGTTTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAAATCGGTTATATTAGTGCAACTTTAGGATTTATTATCGGTATGCTTGGTTGGGCTTATATCTTGTATGAAATCTTTGCAGGTGAAGCTAGTAAAGTTGCTGCAGATGAGGCTCCGGCTTCTGTTCAATCAGCGTTCTCAACAATGCGTTGG TVPLLMVEFYLILRAITNVSQGIFWRLMIGTVVMLVGGYAGEIGYISATLGFIIGMLGWAYILYEIFAGEASKVAADEAPASVQSAFSTMRW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTTTACGCGCA---------ATT---ACTAACGTATCGCAA---GGTATC------------------------------------TTCTGGCGT---TTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAA---------ATC------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------AGTGCA------------------ACTTTAGGA---TTTATTATCGGTATGCTTGGTTGGGCTTATATCTTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGTAAAGTTGCTGCAGAT------GAG---GCTCCGGCTTCTGTT---CAA---TCA---GCG---TTC---TCA---ACAATG---CGTTGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMVEFYLILRA---I-TNVSQ-GI------------FWR-LMIGTVVMLVGGYAGE---I------G--Y-----------I----------------------SA------TLG-FIIGMLGWAYILYEI-----F--A-GEASKVAAD--E-APASV-Q-S-A-F-S-TM-RW------------------------------------------------------------------------------------------------------------------------------------ [III-Alpha3-HTCC2255]_EF089398 [III-Alpha3-HTCC2255] EB0_39F01_genomic_EF089398 gi|119713537|gb|EF089398| Uncultured marine bacterium EB0 39F01 genomic sequence Uncultured marine bacterium EB0 39F01 genomic sequence EF089398 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/HTCC2255 Rhodobacterales-like]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 HTCC2255 Rhodobacterales-like proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:415436 genomic_DNA other 16-nov-07 #na coastal_ocean/Monterey_Bay/surface_seawater Pacific Ocean marine 36.8 -122 Proteorhodopsin photosystem gene clusters exhibit coevolutionary trends and shared ancestry among diverse marine microbial phyla McCarren,J. and DeLong,E.F. Environ. Microbiol. 9 (4), 846858 (2007) 17359257 metagenomic ATGACGATTTTATCAAAAAAAGGCTTTAAAGTGGCCTTAGCAACAGTGGCGGCAGGTATTTTACCAGCTTCGGCACATGCTGCAACACTTGCGCCTAATGATTATGTTGGAATTTCATTCTGGTTGATATCAATGGCACTTATTGCTGCAACAGCATTTTTCTTTATTGAAACTACTAGAGTTGAAGGAAAATGGAAAACATCACTAACAGTATCCGGTTTGGTTACGTTAGTAGCTGCAGTGCACTACTTTTACATGCGTGATGTGTGGGTATCAACAGGTGAATCACCGACAGTATACCGATATATTGATTGGCTAATTACTGTTCCATTATTAATGGTTGAGTTTTATCTGATCCTTCGTGCAATCACTAAGGTATCAATTGGCATCTTCTGGCGCCTAATGATTGGTACTGTAGTCATGCTCGTTGGTGGGTATGCTGGTGAAATCGGTTATATTAGTGCTACTTTAGGATTTATCATTGGTATGCTTGGTTGGGCATATATATTATATGAAATCTTTGCAGGTGAAGCTAGTAAAGTTGCTGCAGATGAAGCTCCTGCTTCAGTACAATCTGCATTCTCAACAATGCGTTGGATTGTGACGATTGGTTGGGCAATTTATCCTTTAGGATATTTTATGGGTTACATGAACGGCGCTGTTAGCGACGAAGCATTGAACATAATCTATAACTTTGCTGATGTATGGAACAAAATAGCGTTTGGTGTAATTATCTGGAACGTTGCTGTAACTGAATCAGAATCTAAA MTILSKKGFKVALATVAAGILPASAHAATLAPNDYVGISFWLISMALIAATAFFFIETTRVEGKWKTSLTVSGLVTLVAAVHYFYMRDVWVSTGESPTVYRYIDWLITVPLLMVEFYLILRAITKVSIGIFWRLMIGTVVMLVGGYAGEIGYISATLGFIIGMLGWAYILYEIFAGEASKVAADEAPASVQSAFSTMRWIVTIGWAIYPLGYFMGYMNGAVSDEALNIIYNFADVWNKIAFGVIIWNVAVTESESK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGACGATTTTATCAAAAAAAGGCTTTAAAGTGGCCTTAGCAACAGTGGCGGCAGGTATTTTACCAGCTTCGGCACATGCTGCA---ACACTTGCGCCTAATGATTATGTTGGAATTTCATTCTGGTTGATATCAATGGCACTTATTGCTGCAACAGCATTTTTCTTTATTGAAACTACTAGAGTTGAAGGA---AAATGGAAAACATCACTAACAGTATCCGGTTTGGTTACGTTAGTAGCTGCAGTGCACTACTTTTACATGCGTGATGTGTGGGTA------------------------------TCAACA---------------------GGTGAATCACCGACAGTATACCGATATATTGATTGG------------------------CTAATTACTGTTCCATTATTAATGGTTGAGTTTTATCTGATCCTTCGTGCA---------ATC---ACTAAGGTATCAATT---GGCATC------------------------------------TTCTGGCGC---CTAATGATTGGTACTGTAGTCATGCTCGTTGGTGGGTATGCTGGTGAA---------ATC------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------AGTGCT------------------ACTTTAGGA---TTTATCATTGGTATGCTTGGTTGGGCATATATATTATATGAAATC---------------TTT------GCA---GGTGAAGCTAGTAAAGTTGCTGCAGAT------GAA---GCTCCTGCTTCAGTA---CAA---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTGACGATT---------------------------------------------------------------GGTTGG---------GCAATTTATCCTTTAGGATATTTTATGGGTTACATG---------------------------------------AACGGCGCTGTTAGCGACGAAGCATTGAACATAATCTATAACTTTGCTGATGTATGGAACAAAATAGCGTTTGGTGTAATTATCTGGAACGTTGCTGTAACTGAA---TCAGAATCTAAA--------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------MTILSKKGFKVALATVAAGILPASAHAA-TLAPNDYVGISFWLISMALIAATAFFFIETTRVEG-KWKTSLTVSGLVTLVAAVHYFYMRDVWV----------ST-------GESPTVYRYIDW--------LITVPLLMVEFYLILRA---I-TKVSI-GI------------FWR-LMIGTVVMLVGGYAGE---I------G--Y-----------I----------------------SA------TLG-FIIGMLGWAYILYEI-----F--A-GEASKVAAD--E-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYPLGYFMGYM-------------NGAVSDEALNIIYNFADVWNKIAFGVIIWNVAVTE-SESK------------------------------------- [III-Alpha3-HTCC2255]_NZ_AATR01000002 [III-Alpha3-HTCC2255] Rhodobacterales_HTCC2255_1100007007355_genome_NZ_AATR01000002 gi|114769558|gb|NZ_AATR01000002| Rhodobacterales bacterium HTCC2255 1100007007355, whole genome shotgun sequence Rhodobacterales bacterium HTCC2255 1100007007355, whole genome shotgun sequence NZ_AATR01000002 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/HTCC2255 Rhodobacterales-like]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 HTCC2255 Rhodobacterales-like proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Alphaproteobacteria/Rhodobacterales] #na genomic_DNA strain 14-nov-12 #na #na Pacific Ocean marine 44.64 -124.05 Direct Submission Giovannoni,S., Cho,J.C., Ferriera,S., Johnson,J., Kravitz,S., Halpern,A., Remington,K., Beeson,K., Tran,B., Rogers,Y.H., Friedman,R. and Venter,J.C. Submitted (14SEP2006) J Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA #na #na ATGACGATTTTATCAAAAAAAGGCTTTAAAGTGGCCTTAGCAACAGTGGCGGCAGGTATTTTACCAGCTTCGGCACATGCTGCAACACTTGCGCCTAATGATTATGTTGGAATTTCATTCTGGTTGATATCAATGGCACTTATTGCTGCAACAGCATTTTTCTTTATTGAAACTACTAGAGTTGAAGGAAAATGGAAAACATCACTAACAGTATCCGGTTTGGTTACGTTAGTAGCTGCAGTGCACTACTTTTACATGCGTGATGTGTGGGTATCAACAGGTGAATCACCGACAGTATACCGATATATTGATTGGCTAATTACTGTTCCATTATTAATGGTTGAGTTTTATCTGATCCTTCGTGCAATCACTAAGGTATCAATTGGCATCTTCTGGCGCCTAATGATTGGTACTGTAGTCATGCTCGTTGGTGGGTATGCTGGTGAAATCGGTTATATTAGTGCTACTTTAGGATTTATCATTGGTATGCTTGGTTGGGCATATATATTATATGAAATCTTTGCAGGTGAAGCTAGTAAAGTTGCTGCAGATGAAGCTCCTGCTTCAGTACAATCTGCATTCTCAACAATGCGTTGGATTGTGACGATTGGTTGGGCAATTTATCCTTTAGGATATTTTATGGGTTACATGAACGGCGCTGTTAGCGACGAAGCATTAAACATAATCTATAACTTTGCTGATGTATGGAACAAAATAGCGTTTGGTGTAATTATCTGGAACGTTGCTGTAACTGAATCAGAATCTAAA MTILSKKGFKVALATVAAGILPASAHAATLAPNDYVGISFWLISMALIAATAFFFIETTRVEGKWKTSLTVSGLVTLVAAVHYFYMRDVWVSTGESPTVYRYIDWLITVPLLMVEFYLILRAITKVSIGIFWRLMIGTVVMLVGGYAGEIGYISATLGFIIGMLGWAYILYEIFAGEASKVAADEAPASVQSAFSTMRWIVTIGWAIYPLGYFMGYMNGAVSDEALNIIYNFADVWNKIAFGVIIWNVAVTESESK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGACGATTTTATCAAAAAAAGGCTTTAAAGTGGCCTTAGCAACAGTGGCGGCAGGTATTTTACCAGCTTCGGCACATGCTGCA---ACACTTGCGCCTAATGATTATGTTGGAATTTCATTCTGGTTGATATCAATGGCACTTATTGCTGCAACAGCATTTTTCTTTATTGAAACTACTAGAGTTGAAGGA---AAATGGAAAACATCACTAACAGTATCCGGTTTGGTTACGTTAGTAGCTGCAGTGCACTACTTTTACATGCGTGATGTGTGGGTA------------------------------TCAACA---------------------GGTGAATCACCGACAGTATACCGATATATTGATTGG------------------------CTAATTACTGTTCCATTATTAATGGTTGAGTTTTATCTGATCCTTCGTGCA---------ATC---ACTAAGGTATCAATT---GGCATC------------------------------------TTCTGGCGC---CTAATGATTGGTACTGTAGTCATGCTCGTTGGTGGGTATGCTGGTGAA---------ATC------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------AGTGCT------------------ACTTTAGGA---TTTATCATTGGTATGCTTGGTTGGGCATATATATTATATGAAATC---------------TTT------GCA---GGTGAAGCTAGTAAAGTTGCTGCAGAT------GAA---GCTCCTGCTTCAGTA---CAA---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTGACGATT---------------------------------------------------------------GGTTGG---------GCAATTTATCCTTTAGGATATTTTATGGGTTACATG---------------------------------------AACGGCGCTGTTAGCGACGAAGCATTAAACATAATCTATAACTTTGCTGATGTATGGAACAAAATAGCGTTTGGTGTAATTATCTGGAACGTTGCTGTAACTGAA---TCAGAATCTAAA--------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------MTILSKKGFKVALATVAAGILPASAHAA-TLAPNDYVGISFWLISMALIAATAFFFIETTRVEG-KWKTSLTVSGLVTLVAAVHYFYMRDVWV----------ST-------GESPTVYRYIDW--------LITVPLLMVEFYLILRA---I-TKVSI-GI------------FWR-LMIGTVVMLVGGYAGE---I------G--Y-----------I----------------------SA------TLG-FIIGMLGWAYILYEI-----F--A-GEASKVAAD--E-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYPLGYFMGYM-------------NGAVSDEALNIIYNFADVWNKIAFGVIIWNVAVTE-SESK------------------------------------- [III-Alpha3-HTCC2255]_FJ862924 [III-Alpha3-HTCC2255] 14_env_samples_FJ862924 gi|226897392|gb|FJ862924| Uncultured bacterium clone 14 putative proteorhodopsin gene, partial cds Uncultured bacterium clone 14 putative proteorhodopsin gene, partial cds FJ862924 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/HTCC2255 Rhodobacterales-like]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 HTCC2255 Rhodobacterales-like proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 07-Dec-2009 #na coastal_seawater Atlantic Ocean marine 38.8489 -75.1076 Lightdependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na ATAGATTGGTTAATTACTGTTCCATTATTGATGGTAGAGTTTTATCTAATCTTGCGTGCAATTACTAACGTATCTCAGGGCATATTCTGGCGTTTGATGATCGGAACATTAGTGATGCTTATAGGTGGGTATGCTGGTGAAGCCGGTTACATAGGTACAACTTTTGGCTTTGTTATAGGCATGCTGGGTTGGGCTTATATTTTATATGAAGTCTTTGCAGGTGAGGCTAGTAAGGTTGTCGCTAGTGAAGCATCGGCCTCAGTTCAGTCAGCATTCTCAACGATGCGTTGGATTGTGTCAATTGGGTGGGCGATATACGCTCGA IDWLITVPLLMVEFYLILRAITNVSQGIFWRLMIGTLVMLIGGYAGEAGYIGTTFGFVIGMLGWAYILYEVFAGEASKVVASEASASVQSAFSTMRWIVSIGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAGATTGG------------------------TTAATTACTGTTCCATTATTGATGGTAGAGTTTTATCTAATCTTGCGTGCA---------ATT---ACTAACGTATCTCAG---GGCATA------------------------------------TTCTGGCGT---TTGATGATCGGAACATTAGTGATGCTTATAGGTGGGTATGCTGGTGAA---------GCC------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------GGTACA------------------ACTTTTGGC---TTTGTTATAGGCATGCTGGGTTGGGCTTATATTTTATATGAAGTC---------------TTT------GCA---GGTGAGGCTAGTAAGGTTGTCGCTAGT------GAA---GCATCGGCCTCAGTT---CAG---TCA---GCA---TTC---TCA---ACGATG---CGTTGGATTGTGTCAATT---------------------------------------------------------------GGGTGG---------GCGATATACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDW--------LITVPLLMVEFYLILRA---I-TNVSQ-GI------------FWR-LMIGTLVMLIGGYAGE---A------G--Y-----------I----------------------GT------TFG-FVIGMLGWAYILYEV-----F--A-GEASKVVAS--E-ASASV-Q-S-A-F-S-TM-RWIVSI---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [III-Alpha3-HTCC2255]_1105095743290 [III-Alpha3-HTCC2255] JCVI_ORF_1105095743290 jcvi|1105095743290| 1105095743290 JCVI ORF 1105095743290 1105095743290 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/HTCC2255 Rhodobacterales-like]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 HTCC2255 Rhodobacterales-like proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 16-nov-03 Coastal/1m_depth/S_26.5_psu/GS008/Newport_Harbor/RI/North_American_East_Coast Atlantic Ocean marine 41.485832 -71.35111 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATACAAATCAACAATAAAACTAAAGTGGGACGATACATGAAGAATTTATTAAAAAACGGCTTTAAAACAGCCTCAGTAACAATTGCAGCCGGCATTTTACCAGCCACTGCTAATGCTGCTGACACACTTGCGAAAGATGATTTTGTCGGAATTTCATTCTGGGTAATCTCAATGGCGCTTGTAGCTGCAACAGCATTTTTCTTTATTGAAACTACAAGAGTTGAAGGAAAATGGAAAACATCCCTAACAGTATCAGGTATGGTAACGCTGGTTGCTGCAGTACATTACTTTTACATGCGAGATGTATGGATAGCGACCGGCGAAACACCGACTGTTTATCGATACATTGACTGGTTAATTACTGTTCCATTATTGATGGTAGAGTTTTATTTAATCTTGCGTGCAATTACTAACGTATCTCAGGGCATATTCTGGCGTTTGATGATCGGAACATTAGTGATGCTTATAGGTGGGTATGCTGGTGAAGCCGGTTACATAGGTACAACTTTTGGCTTTGTTATAGGCATGCTGGGTTGGGCTTATATTTTATATGAAGTCTTTGCAGGTGAGGCTAGTAAGGTTGTCGCTAGTGAAGCATCGGCCTCAGTTCAGTCAGCATTCTCAACGATGCGTTGGATTGTGTCAATTGGTTGGGCTATCTACCCTATAGGTTATTTTATGGGTTACATGAACGGCGCTGTAGCGACGTCAAGCCGCTCC IQINNKTKVGRYMKNLLKNGFKTASVTIAAGILPATANAADTLAKDDFVGISFWVISMALVAATAFFFIETTRVEGKWKTSLTVSGMVTLVAAVHYFYMRDVWIATGETPTVYRYIDWLITVPLLMVEFYLILRAITNVSQGIFWRLMIGTLVMLIGGYAGEAGYIGTTFGFVIGMLGWAYILYEVFAGEASKVVASEASASVQSAFSTMRWIVSIGWAIYPIGYFMGYMNGAVATSSRS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACAAATCAACAATAAAACTAAAGTGGGACGATACATGAAGAATTTATTAAAAAACGGCTTTAAAACAGCCTCAGTAACAATTGCAGCCGGCATTTTACCAGCCACTGCTAATGCTGCTGACACACTTGCGAAAGATGATTTTGTCGGAATTTCATTCTGGGTAATCTCAATGGCGCTTGTAGCTGCAACAGCATTTTTCTTTATTGAAACTACAAGAGTTGAAGGA---AAATGGAAAACATCCCTAACAGTATCAGGTATGGTAACGCTGGTTGCTGCAGTACATTACTTTTACATGCGAGATGTATGGATA------------------------------GCGACC---------------------GGCGAAACACCGACTGTTTATCGATACATTGACTGG------------------------TTAATTACTGTTCCATTATTGATGGTAGAGTTTTATTTAATCTTGCGTGCA---------ATT---ACTAACGTATCTCAG---GGCATA------------------------------------TTCTGGCGT---TTGATGATCGGAACATTAGTGATGCTTATAGGTGGGTATGCTGGTGAA---------GCC------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------GGTACA------------------ACTTTTGGC---TTTGTTATAGGCATGCTGGGTTGGGCTTATATTTTATATGAAGTC---------------TTT------GCA---GGTGAGGCTAGTAAGGTTGTCGCTAGT------GAA---GCATCGGCCTCAGTT---CAG---TCA---GCA---TTC---TCA---ACGATG---CGTTGGATTGTGTCAATT---------------------------------------------------------------GGTTGG---------GCTATCTACCCTATAGGTTATTTTATGGGTTACATG---------------------------------------AACGGCGCTGTAGCGACGTCAAGCCGCTCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------IQINNKTKVGRYMKNLLKNGFKTASVTIAAGILPATANAADTLAKDDFVGISFWVISMALVAATAFFFIETTRVEG-KWKTSLTVSGMVTLVAAVHYFYMRDVWI----------AT-------GETPTVYRYIDW--------LITVPLLMVEFYLILRA---I-TNVSQ-GI------------FWR-LMIGTLVMLIGGYAGE---A------G--Y-----------I----------------------GT------TFG-FVIGMLGWAYILYEV-----F--A-GEASKVVAS--E-ASASV-Q-S-A-F-S-TM-RWIVSI---------------------GW---AIYPIGYFMGYM-------------NGAVATSSRS------------------------------------------------------------------- [III-Alpha3-HTCC2255]_EU915892 [III-Alpha3-HTCC2255] US80226_env_samples_EU915892 gi|229358666|gb|EU915892| Uncultured microorganism clone US80226 putative proteorhodopsin gene, partial cds Uncultured microorganism clone US80226 putative proteorhodopsin gene, partial cds EU915892 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/HTCC2255 Rhodobacterales-like]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 HTCC2255 Rhodobacterales-like proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_surface_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTGGCCGCTACTGTATTCTTCTTTATTGAGACAACTAGAGTTGAAGGCAAATGGAAAACATCACTAACAGTATCAGGTTTGGTAACTTTAGTGGCTGCAGTACACTATTTCTACATGCGTGATGTATGGGTATCAACTGGTGAGTCACCAACAGTATACAGATACATTGATTGGTTAATTACTGTACCATTATTAATGGTTGAGTTTTACCTAATCTTACGCGCAATAACTAAGGTATCAATTGGTATCTTCTGGCGTCTAATGATCGGTACAGTAGTAATGCTTGTAGGTGGTTATGCTGGTGAAATTGGTTACATTAGTGCAACTCTTGGATTCATTATTGGTATTCTTGGTTGGGCTTACATCTTGTATGAAATCTTTGCAGGTGAAGCTAGTAAAGTTGCTGCAAATGAAGCTCCGGCTTCAGTACAATCTGCGTTCTCTACAATGCGTTGGGTCGTATCAATCGGATGGGCCATTTAC MLAATVFFFIETTRVEGKWKTSLTVSGLVTLVAAVHYFYMRDVWVSTGESPTVYRYIDWLITVPLLMVEFYLILRAITKVSIGIFWRLMIGTVVMLVGGYAGEIGYISATLGFIIGILGWAYILYEIFAGEASKVAANEAPASVQSAFSTMRWVVSIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGTATTCTTCTTTATTGAGACAACTAGAGTTGAAGGC---AAATGGAAAACATCACTAACAGTATCAGGTTTGGTAACTTTAGTGGCTGCAGTACACTATTTCTACATGCGTGATGTATGGGTA------------------------------TCAACT---------------------GGTGAGTCACCAACAGTATACAGATACATTGATTGG------------------------TTAATTACTGTACCATTATTAATGGTTGAGTTTTACCTAATCTTACGCGCA---------ATA---ACTAAGGTATCAATT---GGTATC------------------------------------TTCTGGCGT---CTAATGATCGGTACAGTAGTAATGCTTGTAGGTGGTTATGCTGGTGAA---------ATT------------------GGT------TAC---------------------------------ATT------------------------------------------------------------------AGTGCA------------------ACTCTTGGA---TTCATTATTGGTATTCTTGGTTGGGCTTACATCTTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGTAAAGTTGCTGCAAAT------GAA---GCTCCGGCTTCAGTA---CAA---TCT---GCG---TTC---TCT---ACAATG---CGTTGGGTCGTATCAATC---------------------------------------------------------------GGATGG---------GCCATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFIETTRVEG-KWKTSLTVSGLVTLVAAVHYFYMRDVWV----------ST-------GESPTVYRYIDW--------LITVPLLMVEFYLILRA---I-TKVSI-GI------------FWR-LMIGTVVMLVGGYAGE---I------G--Y-----------I----------------------SA------TLG-FIIGILGWAYILYEI-----F--A-GEASKVAAN--E-APASV-Q-S-A-F-S-TM-RWVVSI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ062285 [III-Alpha2-SAR11/Himb59] MEDPR83B6_env_samples_DQ062285 gi|67483515|gb|DQ062285| Uncultured bacterium clone MEDPR83B6 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR83B6 proteorhodopsin gene, partial cds DQ062285 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na AGCTACATAGACTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCTGTCGGAAGTGCTTCTGGCGGTATCTTCTGGAGACTTATGATCGGTACACTAGTAATGCCAGTTGGTGGTTATATGGGTGAAGCTGGATACATCAACCTATGGGCTGGTTTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCTGCTGATAAAGCACCTGCTTCAGTTCAATCTGCTTTCTCAACAATGAGATGGATCGTAACAATTGGTTGGGCCATGTATCCA SYIDWLITVPLLMVEFYIILRAVGSASGGIFWRLMIGTLVMPVGGYMGEAGYINLWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQSAFSTMRWIVTIGWAMYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATAGACTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCT---------GTC---GGAAGTGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCCAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACCTA------------------TGGGCTGGT---TTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCACCTGCTTCAGTT---CAA---TCT---GCT---TTC---TCA---ACAATG---AGATGGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCCATGTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMVEFYIILRA---V-GSASG-GI------------FWR-LMIGTLVMPVGGYMGE---A------G--Y-----------I----------------------NL------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AMYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ203382 [III-Alpha2-SAR11/Himb59] MedHO102D6_env_samples_DQ203382 gi|77547212|gb|DQ203382| Uncultured bacterium clone MedHO102D6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102D6 predicted proteorhodopsin gene, partial cds DQ203382 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATAGACTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCTGTCGGAAGCGCTTCTGGCGGTATCTTCTGGAGACTTATGATCGGTACACTAGTAATGCCAGTTGGTGGTTATATGGGTGAAGCTGGATACATCAACCTATGGGCTGGTTTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCTGCTGATAAAGCACCTGCTTCAGTTCAATCTGCTTTCTCAACAATGAGATGGATCGTAACAATTGGTTGGGCCATTTATCCA RYIDWLITVPLLMVEFYIILRAVGSASGGIFWRLMIGTLVMPVGGYMGEAGYINLWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATAGACTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCT---------GTC---GGAAGCGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCCAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACCTA------------------TGGGCTGGT---TTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCACCTGCTTCAGTT---CAA---TCT---GCT---TTC---TCA---ACAATG---AGATGGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYIILRA---V-GSASG-GI------------FWR-LMIGTLVMPVGGYMGE---A------G--Y-----------I----------------------NL------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ203430 [III-Alpha2-SAR11/Himb59] MedHO102H9_env_samples_DQ203430 gi|77547308|gb|DQ203430| Uncultured bacterium clone MedHO102H9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102H9 predicted proteorhodopsin gene, partial cds DQ203430 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATAGACTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCTGTCGGAAGTGCTTCTGGCGGTATCTTCTGGAGACTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAAGCTGGATACATCAACCTATGGGCTGGTTTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCTGCTGATAAAGCACCTGCTTCAGTTCAATCTGCTTTCTCAACAATGAGATGGATCGTAACAATTGGTTGGGCCATCTATCCA RYIDWLITVPLLMVEFYIILRAVGSASGGIFWRLMIGTLVMLVGGYMGEAGYINLWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATAGACTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCT---------GTC---GGAAGTGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACCTA------------------TGGGCTGGT---TTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCACCTGCTTCAGTT---CAA---TCT---GCT---TTC---TCA---ACAATG---AGATGGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYIILRA---V-GSASG-GI------------FWR-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NL------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ203408 [III-Alpha2-SAR11/Himb59] MedHO102F9_env_samples_DQ203408 gi|77547264|gb|DQ203408| Uncultured bacterium clone MedHO102F9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102F9 predicted proteorhodopsin gene, partial cds DQ203408 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATCGACTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCTGTCGGAAGTGCTTCTGGCGGTATCTTCTGGAGACTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAAGCTGGATACATCAACCTATGGGCTGGTTTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCTGCTGATAAAGCACCTGCTTCAGTTCAATCTGCTTTCTCAACAATGAGATGGATCGTAACAATTGGTTGGGCCATTTATCCA RYIDWLITVPLLMVEFYIILRAVGSASGGIFWRLMIGTLVMLVGGYMGEAGYINLWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATCGACTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCT---------GTC---GGAAGTGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACCTA------------------TGGGCTGGT---TTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCACCTGCTTCAGTT---CAA---TCT---GCT---TTC---TCA---ACAATG---AGATGGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYIILRA---V-GSASG-GI------------FWR-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NL------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_CP003801 [III-Alpha2-SAR11/Himb59] Alphaproteobacterium_HIMB59_genome_CP003801 gi|406652805|gb|CP003801| Alpha proteobacterium HIMB59, complete genome Alpha proteobacterium HIMB59, complete genome CP003801 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Alphaproteobacteria/SAR11 cluster] taxon:744985 genomic_DNA strain 11-Dec-2013 #na #na Pacific Ocean marine 21.460467 -157.787657 Direct Submission Grote,J., Thrash,C., Huggett,M.J., Landry,Z., Carini,P., Giovannoni,S.J., Rappe,M.S., Brinkac,L., Kim,M., Beeson,K., Ferriera,S., Sutton,G., Friedman,R. and Venter,J.C. Submitted (31AUG2012) J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA #na #na ATGTTTAAAAAAACCCTATTACCAGCATCTCTATTGTTGGTATTACCTCAGTTCGCTAACGCAGCTGCGAACTTAGAATCCGACGATTTCGTTGGTATTTCATTTTGGCTGATTTCTATGGCCCTAGTCGCTTCAACAGCATTCTTCTTTTTAGAGACTCAGAGAGTTTCTGCTAAGTGGAAAACTTCACTAACAGTATCTGGTCTAGTTACTTTAGTTGCTGCTGTTCACTATTTCTATATGCGTGATGTATGGATCGCAACAGGCGATACACCAACAGTTTATAGATATATCGACTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCTGTCGGAAGTGCTTCTGGCGGTATCTTCTGGAGACTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAAGCTGGATACATCAACCTATGGGCTGGTTTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCTGCTGACAAAGCACCTGCTTCAGTTCAATCTGCTTTCTCAACAATGAGATGGATCGTAACAATTGGTTGGGCTATTTATCCTTTAGGATATTTCTTTGGTTATTTAACAGGCGGAGCAAGCATGGAATCTCTAAACGTTATCTATAACCTTGCTGACGTTCTAAACAAGATTGCATTCGGTGTGATCATCTGGAACGTTGCAACAGTAGAATCTAAAGCT MFKKTLLPASLLLVLPQFANAAANLESDDFVGISFWLISMALVASTAFFFLETQRVSAKWKTSLTVSGLVTLVAAVHYFYMRDVWIATGDTPTVYRYIDWLITVPLLMVEFYIILRAVGSASGGIFWRLMIGTLVMLVGGYMGEAGYINLWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQSAFSTMRWIVTIGWAIYPLGYFFGYLTGGASMESLNVIYNLADVLNKIAFGVIIWNVATVESKA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTTTAAAAAAACCCTATTACCAGCATCTCTATTGTTGGTATTACCTCAGTTCGCTAACGCAGCTGCGAACTTAGAATCCGACGATTTCGTTGGTATTTCATTTTGGCTGATTTCTATGGCCCTAGTCGCTTCAACAGCATTCTTCTTTTTAGAGACTCAGAGAGTTTCTGCTAAGTGGAAAACTTCACTAACAGTATCTGGTCTAGTTACTTTAGTTGCTGCTGTTCACTATTTCTATATGCGTGATGTATGGATCGCAACAGGCGATACACCAACAGTTTATAGATATATCGACTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCT---------GTC---GGAAGTGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACCTA------------------TGGGCTGGT---TTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTGCTGAC------AAA---GCACCTGCTTCAGTT---CAA---TCT---GCT---TTC---TCA---ACAATG---AGATGGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCTTTAGGATATTTCTTTGGTTATTTAACAGGCGGAGCAAGCATGGAATCTCTAAACGTTATCTATAACCTTGCTGACGTTCTAAACAAGATTGCATTCGGTGTGATCATCTGGAACGTTGCAACAGTAGAATCTAAAGCT------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------MFKKTLLPASLLLVLPQFANAAANLESDDFVGISFWLISMALVASTAFFFLETQRVSAKWKTSLTVSGLVTLVAAVHYFYMRDVWIATGDTPTVYRYIDW--------LITVPLLMVEFYIILRA---V-GSASG-GI------------FWR-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NL------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYPLGYFFGYLTGGASMESLNVIYNLADVLNKIAFGVIIWNVATVESKA---------------------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ203407 [III-Alpha2-SAR11/Himb59] MedHO102F8_env_samples_DQ203407 gi|77547262|gb|DQ203407| Uncultured bacterium clone MedHO102F8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102F8 predicted proteorhodopsin gene, partial cds DQ203407 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATCGACTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCTGTCGGAAGTGCTTCTGGCGGTATCTTCTGGAGACTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAAGCTGGATACATCAACCTATGGGCTGGTTTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCTGCTGATAAAGCACCTGCTTCAGTTCAATCTGCTTTCTCAACAATGAGATGGATCGTAACAATTGGTTGGGCCATTTATCCA RYIDWLITVPLLMVEFYIILRAVGSASGGIFWRLMIGTLVMLVGGYMGEAGYINLWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATCGACTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCT---------GTC---GGAAGTGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACCTA------------------TGGGCTGGT---TTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCACCTGCTTCAGTT---CAA---TCT---GCT---TTC---TCA---ACAATG---AGATGGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYIILRA---V-GSASG-GI------------FWR-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NL------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ203402 [III-Alpha2-SAR11/Himb59] MedHO102F3_env_samples_DQ203402 gi|77547252|gb|DQ203402| Uncultured bacterium clone MedHO102F3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102F3 predicted proteorhodopsin gene, partial cds DQ203402 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATATATCGACTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCTGTCGGAAGTGCTTCTGGCGGTATCTTCTGGAGACTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAAGCTGGATACATCAACCTATGGGCTGGTTTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCTGCTGATAAAGCACCTGCTTCAGTTCAATCTGCTTTCTCAACAATGAGATGGATTGTAACAATTGGGTGGGCGATCTATCCA RYIDWLITVPLLMVEFYIILRAVGSASGGIFWRLMIGTLVMLVGGYMGEAGYINLWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATATATCGACTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCT---------GTC---GGAAGTGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACCTA------------------TGGGCTGGT---TTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCACCTGCTTCAGTT---CAA---TCT---GCT---TTC---TCA---ACAATG---AGATGGATTGTAACAATT---------------------------------------------------------------GGGTGG---------GCGATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYIILRA---V-GSASG-GI------------FWR-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NL------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ203497 [III-Alpha2-SAR11/Himb59] MedHO1202A4_env_samples_DQ203497 gi|77547442|gb|DQ203497| Uncultured bacterium clone MedHO1202A4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202A4 predicted proteorhodopsin gene, partial cds DQ203497 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATATATCGACTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCTGTCGGAAGTGCTTCTGGCGGTATCTTCTGGAGACTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAAGCTGGATACATCAACTTATGGGCTGGTTTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCTGCTGATAAAGCACCTGCTTCAGTTCAATCTGCTTTCTCAACAATGAGATGGATCGTAACAATTGGGTGGGCAATTTACCCA RYIDWLITVPLLMVEFYIILRAVGSASGGIFWRLMIGTLVMLVGGYMGEAGYINLWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATATATCGACTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCT---------GTC---GGAAGTGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACTTA------------------TGGGCTGGT---TTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCACCTGCTTCAGTT---CAA---TCT---GCT---TTC---TCA---ACAATG---AGATGGATCGTAACAATT---------------------------------------------------------------GGGTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYIILRA---V-GSASG-GI------------FWR-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NL------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ203488 [III-Alpha2-SAR11/Himb59] medHO10H8_env_samples_DQ203488 gi|77547424|gb|DQ203488| Uncultured bacterium clone medHO10H8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10H8 predicted proteorhodopsin gene, partial cds DQ203488 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGACTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCTGTCGGAAGTGCTTCTGGCGGTATCTTCTGGAGACTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAAGCTGGATACATCAACCTATGGGCTGGTTTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCTGCTGATAAAGCACCTGCTTCAGTTCAATCTGCTTTCTCAACAATGAGATGGATTGTAACAATTGGTTGGGCAATCTATCCA SYIDWLITVPLLMVEFYIILRAVGSASGGIFWRLMIGTLVMLVGGYMGEAGYINLWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGACTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCT---------GTC---GGAAGTGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACCTA------------------TGGGCTGGT---TTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCACCTGCTTCAGTT---CAA---TCT---GCT---TTC---TCA---ACAATG---AGATGGATTGTAACAATT---------------------------------------------------------------GGTTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMVEFYIILRA---V-GSASG-GI------------FWR-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NL------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ203597 [III-Alpha2-SAR11/Himb59] medHO120B3_env_samples_DQ203597 gi|77547642|gb|DQ203597| Uncultured bacterium clone medHO120B3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120B3 predicted proteorhodopsin gene, partial cds DQ203597 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGACTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCTGTCGGAAGTGCTTCTGGCGGTATCTTCTGGAGACTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAAGCTGGATACATCAACCTATGGGCTGGTTTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCTGCTGATAAAGCACCTGCTTCAGTTCAATCTGCTTTCTCAACAATGAGATGGATTGTAACAATTGGTTGGGCAATTTATCCA RYIDWLITVPLLMVEFYIILRAVGSASGGIFWRLMIGTLVMLVGGYMGEAGYINLWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGACTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCT---------GTC---GGAAGTGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACCTA------------------TGGGCTGGT---TTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCACCTGCTTCAGTT---CAA---TCT---GCT---TTC---TCA---ACAATG---AGATGGATTGTAACAATT---------------------------------------------------------------GGTTGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYIILRA---V-GSASG-GI------------FWR-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NL------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ062291 [III-Alpha2-SAR11/Himb59] MEDPR106G7_env_samples_DQ062291 gi|67483527|gb|DQ062291| Uncultured bacterium clone MEDPR106G7 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR106G7 proteorhodopsin gene, partial cds DQ062291 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na AGGTACATAGATTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCTGTCGGAAGCGCTTCTGGCGGTATCTTCTGGAGACTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAAGCTGGATACATCAACCTATGGGCTGGTTTCATAGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCTGCTGATAAAGCACCTGCTTCAGTTCAATCTGCTTTCTCAACAATGAGATGGATCGTAACAATTGGTTGGGCCATTTATCCA RYIDWLITVPLLMVEFYIILRAVGSASGGIFWRLMIGTLVMLVGGYMGEAGYINLWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATAGATTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCT---------GTC---GGAAGCGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACCTA------------------TGGGCTGGT---TTCATAGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCACCTGCTTCAGTT---CAA---TCT---GCT---TTC---TCA---ACAATG---AGATGGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYIILRA---V-GSASG-GI------------FWR-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NL------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ062280 [III-Alpha2-SAR11/Himb59] MEDPR79G12_env_samples_DQ062280 gi|67483505|gb|DQ062280| Uncultured bacterium clone MEDPR79G12 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR79G12 proteorhodopsin gene, partial cds DQ062280 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na AGGTACATAGATTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCCACATCATCCTAAGAGCTGTCGGAAGCGCTTCTGGCGGTATCTTCTGGAGACTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAAGCTGGATACATCAACCTATGGGCTGGTTTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCTGCTGATAAAGCACCTGCTTCAGTTCAATCTGCTTTCTCAACAATGAGATGGATCGTAACAATTGGTTGGGCCATATATCCA RYIDWLITVPLLMVEFHIILRAVGSASGGIFWRLMIGTLVMLVGGYMGEAGYINLWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATAGATTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCCACATCATCCTAAGAGCT---------GTC---GGAAGCGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACCTA------------------TGGGCTGGT---TTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCACCTGCTTCAGTT---CAA---TCT---GCT---TTC---TCA---ACAATG---AGATGGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFHIILRA---V-GSASG-GI------------FWR-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NL------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ062278 [III-Alpha2-SAR11/Himb59] MEDPR77A3_env_samples_DQ062278 gi|67483501|gb|DQ062278| Uncultured bacterium clone MEDPR77A3 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR77A3 proteorhodopsin gene, partial cds DQ062278 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na AGGTACATTGATTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCTGTCGGAAGCGCTTCTGGCGGTATCTTCTGGAGACTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAAGCTGGATACATCAACCTATGGGCTGGTTTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCTGCTGATAAAGCACCTGCTTCAGTTCAATCTGCTTTCTCAACAATGAGATGGATCGTAACAATTGGTTGGGCCATTTATCCA RYIDWLITVPLLMVEFYIILRAVGSASGGIFWRLMIGTLVMLVGGYMGEAGYINLWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATTGATTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCT---------GTC---GGAAGCGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACCTA------------------TGGGCTGGT---TTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCACCTGCTTCAGTT---CAA---TCT---GCT---TTC---TCA---ACAATG---AGATGGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYIILRA---V-GSASG-GI------------FWR-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NL------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ203411 [III-Alpha2-SAR11/Himb59] MedHO102G11_env_samples_DQ203411 gi|77547270|gb|DQ203411| Uncultured bacterium clone MedHO102G11 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102G11 predicted proteorhodopsin gene, partial cds DQ203411 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTACATTGATTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCTGTCGGAAGTGCTTCTGGCGGTATCTTCTGGAGACTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAAGCTGGATACATCAACCTATGGGCTGGTTTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCTGCTGATAAAGCACCTGCTTCAGTTCAATCTGCTTTCTCAACAATGAGATGGATCGTAACAATTGGTTGGGCCATTTATCCA RYIDWLITVPLLMVEFYIILRAVGSASGGIFWRLMIGTLVMLVGGYMGEAGYINLWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATTGATTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCT---------GTC---GGAAGTGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACCTA------------------TGGGCTGGT---TTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCACCTGCTTCAGTT---CAA---TCT---GCT---TTC---TCA---ACAATG---AGATGGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYIILRA---V-GSASG-GI------------FWR-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NL------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ062275 [III-Alpha2-SAR11/Himb59] MEDPR66C7_env_samples_DQ062275 gi|67483495|gb|DQ062275| Uncultured bacterium clone MEDPR66C7 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR66C7 proteorhodopsin gene, partial cds DQ062275 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na AGGTACATTGATTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCTGTCGGAAGTGCTTCTGGTGGTATCTTCTGGAGACTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAAGCTGGATACATCAACCTATGGGCTGGTTTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCTGCTGATAAAGCACCTGCTTCAGTTCAATCTGCTTTCTCAACAATGAGATGGATCGTAACAATTGGTTGGGCCATTTATCCA RYIDWLITVPLLMVEFYIILRAVGSASGGIFWRLMIGTLVMLVGGYMGEAGYINLWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATTGATTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCT---------GTC---GGAAGTGCTTCTGGT---GGTATC------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACCTA------------------TGGGCTGGT---TTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCACCTGCTTCAGTT---CAA---TCT---GCT---TTC---TCA---ACAATG---AGATGGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYIILRA---V-GSASG-GI------------FWR-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NL------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ062284 [III-Alpha2-SAR11/Himb59] MEDPR83B3_env_samples_DQ062284 gi|67483513|gb|DQ062284| Uncultured bacterium clone MEDPR83B3 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR83B3 proteorhodopsin gene, partial cds DQ062284 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na AGGTACATTGATTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCTGTCGGAAGTGCTTCTGGCGGTATCTTCTGGAGACTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAAGCTGGATACATCAACCTATGGGCTGGTTTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCTGCTGATAAAGCACCTGCTTCAGTTCAATCTGCTTTCTCAACAATGAGATGGATCGTAACAATTGGTTGGGCCATTTACCCA RYIDWLITVPLLMVEFYIILRAVGSASGGIFWRLMIGTLVMLVGGYMGEAGYINLWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATTGATTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCT---------GTC---GGAAGTGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACCTA------------------TGGGCTGGT---TTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCACCTGCTTCAGTT---CAA---TCT---GCT---TTC---TCA---ACAATG---AGATGGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYIILRA---V-GSASG-GI------------FWR-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NL------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ062290 [III-Alpha2-SAR11/Himb59] MEDPR98G12_env_samples_DQ062290 gi|67483525|gb|DQ062290| Uncultured bacterium clone MEDPR98G12 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR98G12 proteorhodopsin gene, partial cds DQ062290 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na AGGTACATCGACTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCTGTCGGAAGTGCTTCTGGCGGTATCTTCTGGAGACTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAAGCTGGATACATCAACCTATGGGCTGGTTTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCTGCTGATAAAGCACCTGCTTCAGTTCAATCTGCTTTCTCAACAATGAGATGGATCGTAACAATTGGTTGGGCCATTTATCCA RYIDWLITVPLLMVEFYIILRAVGSASGGIFWRLMIGTLVMLVGGYMGEAGYINLWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATCGACTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCT---------GTC---GGAAGTGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACCTA------------------TGGGCTGGT---TTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCACCTGCTTCAGTT---CAA---TCT---GCT---TTC---TCA---ACAATG---AGATGGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYIILRA---V-GSASG-GI------------FWR-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NL------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ203418 [III-Alpha2-SAR11/Himb59] MedHO102G8_env_samples_DQ203418 gi|77547284|gb|DQ203418| Uncultured bacterium clone MedHO102G8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102G8 predicted proteorhodopsin gene, partial cds DQ203418 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATCGACTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCGTCCTAAGAGCTGTCGGAAGTGCTTCTGGCGGTATCTTCTGGAGACTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAAGCTGGATACATCAACCTATGGGCTGGTTTCATCGTTGGTATGGCTGGTTGGGCGTATATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCTGCTGATAAAGCACCTGCTTCAGTTCAATCTGCTTTCTCAACAATGAGATGGATCGTAACAATTGGTTGGGCCATATATCCA RYIDWLITVPLLMVEFYIVLRAVGSASGGIFWRLMIGTLVMLVGGYMGEAGYINLWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATCGACTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCGTCCTAAGAGCT---------GTC---GGAAGTGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACCTA------------------TGGGCTGGT---TTCATCGTTGGTATGGCTGGTTGGGCGTATATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCACCTGCTTCAGTT---CAA---TCT---GCT---TTC---TCA---ACAATG---AGATGGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYIVLRA---V-GSASG-GI------------FWR-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NL------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ203429 [III-Alpha2-SAR11/Himb59] MedHO102H8_env_samples_DQ203429 gi|77547306|gb|DQ203429| Uncultured bacterium clone MedHO102H8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102H8 predicted proteorhodopsin gene, partial cds DQ203429 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATCGACTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCGTCCTAAGAGCTGTCGGAAGTGCTTCTGGCGGTATCTTCTGGAGACTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAAGCTGGATACATCAACCTATGGGCTGGTTTCATCGTTGGTATGGCTGGTTGGGCGTATATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCTGCTGATAAAGCACCTGCTTCAGTTCAATCTGCTTTCTCAACAATGAGATGGATCGTAACAATTGGTTGGGCCATATATCCA RYIDWLITVPLLMVEFYIVLRAVGSASGGIFWRLMIGTLVMLVGGYMGEAGYINLWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATCGACTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCGTCCTAAGAGCT---------GTC---GGAAGTGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACCTA------------------TGGGCTGGT---TTCATCGTTGGTATGGCTGGTTGGGCGTATATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCACCTGCTTCAGTT---CAA---TCT---GCT---TTC---TCA---ACAATG---AGATGGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYIVLRA---V-GSASG-GI------------FWR-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NL------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ203611 [III-Alpha2-SAR11/Himb59] medHO120D1_env_samples_DQ203611 gi|77547670|gb|DQ203611| Uncultured bacterium clone medHO120D1 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120D1 predicted proteorhodopsin gene, partial cds DQ203611 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTATATCGACTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCTGTCGGAAGCGCTTCTGGCGGTATCTTCTGGAGACTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAAGCTGGATACATCAACCTATGGGCTGGTTTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCTGCTGATAAAGCACCTGCTTCAGTTCAATCTGCTTTCTCAACAATGAGATGGATCGTAACAATTGGTTGGGCCATCTATCCA RYIDWLITVPLLMVEFYIILRAVGSASGGIFWRLMIGTLVMLVGGYMGEAGYINLWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTATATCGACTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCT---------GTC---GGAAGCGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACCTA------------------TGGGCTGGT---TTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCACCTGCTTCAGTT---CAA---TCT---GCT---TTC---TCA---ACAATG---AGATGGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYIILRA---V-GSASG-GI------------FWR-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NL------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ203356 [III-Alpha2-SAR11/Himb59] MedHO102B3_env_samples_DQ203356 gi|77547160|gb|DQ203356| Uncultured bacterium clone MedHO102B3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102B3 predicted proteorhodopsin gene, partial cds DQ203356 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGACTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCTGTCGGAAGTGCTTCTGGCGGTATCTTCTGGAGACTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAAGCTGGATACATCAACCTATGGGCTGGTTTCATCGTTGGTATGGCTGGTTGGGCATATATCCTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCTGCTGATAAAGCACCTGCTTCAGTTCAATCTGCTTTCTCAACAATGAGATGGATCGTAACAATTGGTTGGGCCATATATCCA SYIDWLITVPLLMVEFYIILRAVGSASGGIFWRLMIGTLVMLVGGYMGEAGYINLWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGACTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCT---------GTC---GGAAGTGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACCTA------------------TGGGCTGGT---TTCATCGTTGGTATGGCTGGTTGGGCATATATCCTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCACCTGCTTCAGTT---CAA---TCT---GCT---TTC---TCA---ACAATG---AGATGGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMVEFYIILRA---V-GSASG-GI------------FWR-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NL------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ203448 [III-Alpha2-SAR11/Himb59] medHO10B3_env_samples_DQ203448 gi|77547344|gb|DQ203448| Uncultured bacterium clone medHO10B3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10B3 predicted proteorhodopsin gene, partial cds DQ203448 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGACTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCTGTCGGAAGTGCTTCTGGCGGTATCTTCTGGAGACTCATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAAGCTGGATACATCAACCTATGGGCTGGTTTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCTGCTGATAAAGCACCTGCTTCAGTTCAATCTGCTTTCTCAACAATGAGATGGATCGTAACAATTGGTTGGGCCATATATCCA SYIDWLITVPLLMVEFYIILRAVGSASGGIFWRLMIGTLVMLVGGYMGEAGYINLWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGACTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCT---------GTC---GGAAGTGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTCATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACCTA------------------TGGGCTGGT---TTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCACCTGCTTCAGTT---CAA---TCT---GCT---TTC---TCA---ACAATG---AGATGGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMVEFYIILRA---V-GSASG-GI------------FWR-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NL------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ203510 [III-Alpha2-SAR11/Himb59] MedHO1202B5_env_samples_DQ203510 gi|77547468|gb|DQ203510| Uncultured bacterium clone MedHO1202B5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202B5 predicted proteorhodopsin gene, partial cds DQ203510 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGTTATATTGACTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCTGTCGGAAGTGCTTCTGGCGGTATCTTCTGGAGACTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAAGCTGGATACATCAACCTATGGGCTGGTTTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCTGCTGATAAAGCACCTGCTTCAGTTCAATCTGCTTTCTCAACAATGAGATGGATCGTAACAATTGGTTGGGCCATTTATCCA SYIDWLITVPLLMVEFYIILRAVGSASGGIFWRLMIGTLVMLVGGYMGEAGYINLWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTTATATTGACTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCT---------GTC---GGAAGTGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACCTA------------------TGGGCTGGT---TTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCACCTGCTTCAGTT---CAA---TCT---GCT---TTC---TCA---ACAATG---AGATGGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMVEFYIILRA---V-GSASG-GI------------FWR-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NL------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ062257 [III-Alpha2-SAR11/Himb59] MEDPR38_env_samples_DQ062257 gi|67483459|gb|DQ062257| Uncultured bacterium clone MEDPR38 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR38 proteorhodopsin gene, partial cds DQ062257 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na CGATACATAGACTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCTGTCGGAAGCGCTTCTGGCGGCATCTTCTGGAGACTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAAGCTGGATACATCAACCCATGGGCTGGTTTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCTGCTGATAAAGCACCTGCTTCAGTTCAATCTGCTTTCTCAACAATGAGATGGATCGTAACAATTGGTTGGGCTATTTATCCA RYIDWLITVPLLMVEFYIILRAVGSASGGIFWRLMIGTLVMLVGGYMGEAGYINPWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATAGACTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCT---------GTC---GGAAGCGCTTCTGGC---GGCATC------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACCCA------------------TGGGCTGGT---TTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCACCTGCTTCAGTT---CAA---TCT---GCT---TTC---TCA---ACAATG---AGATGGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYIILRA---V-GSASG-GI------------FWR-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NP------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ062276 [III-Alpha2-SAR11/Himb59] MEDPR72_env_samples_DQ062276 gi|67483497|gb|DQ062276| Uncultured bacterium clone MEDPR72 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR72 proteorhodopsin gene, partial cds DQ062276 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na AGATACATAGACTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCTGTCGGAAGCGCTTCTGGCGGTATCTTCTGGAGACTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAAGCTGGATACATCAACCTATGGGCTGGTTTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCTGCTGATAAAGCACCTGCTTCAGTTCAATCTGCTTTCTCAACAATGAGATGGATCGTAACAATTGGTTGGGCTATTTATCCA RYIDWLITVPLLMVEFYIILRAVGSASGGIFWRLMIGTLVMLVGGYMGEAGYINLWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCT---------GTC---GGAAGCGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACCTA------------------TGGGCTGGT---TTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCACCTGCTTCAGTT---CAA---TCT---GCT---TTC---TCA---ACAATG---AGATGGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYIILRA---V-GSASG-GI------------FWR-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NL------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ422705 [III-Alpha2-SAR11/Himb59] clone_med-tb04-20m-g10_DQ422705 gi|90024930|gb|DQ422705| Uncultured bacterium clone med-tb04-20m-g10 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-g10 putative proteorhodopsin gene, partial cds. DQ422705 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCTGTCGGAAGCGCTTCTGGCGGTATCTTCTGGAGACTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAAGCTGGATACATCAACTTATGGGCTGGTTTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCTGCTGATAAAGCACCTGCTTCAGTTCAACAAGCTTTCTCAACAATGAGATGGATTGTAACAATTGGTTGGGCTATTTATCCA RYIDWLITVPLLMVEFYIILRAVGSASGGIFWRLMIGTLVMLVGGYMGEAGYINLWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQQAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCT---------GTC---GGAAGCGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACTTA------------------TGGGCTGGT---TTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCACCTGCTTCAGTT---CAA---CAA---GCT---TTC---TCA---ACAATG---AGATGGATTGTAACAATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYIILRA---V-GSASG-GI------------FWR-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NL------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-Q-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ422532 [III-Alpha2-SAR11/Himb59] clone_med-tb04-50m-h11_DQ422532 gi|90024584|gb|DQ422532| Uncultured bacterium clone med-tb04-50m-h11 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-h11 putative proteorhodopsin gene, partial cds. DQ422532 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCTGTCGGAAGCGCTTCTGGCGGTATTTTCTGGAGACTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAAGCTGGATACATCAACGAATGGGCAGGTTTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCTGCTGATAAAGCACCTGCTTCAGTACAACAAGCTTTCTCAACAATGAGATGGATTGTAACAATTGGTTGGGCTATTTATCCA RYIDWLITVPLLMVEFYIILRAVGSASGGIFWRLMIGTLVMLVGGYMGEAGYINEWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQQAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCT---------GTC---GGAAGCGCTTCTGGC---GGTATT------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGAA------------------TGGGCAGGT---TTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCACCTGCTTCAGTA---CAA---CAA---GCT---TTC---TCA---ACAATG---AGATGGATTGTAACAATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYIILRA---V-GSASG-GI------------FWR-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NE------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-Q-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ062270 [III-Alpha2-SAR11/Himb59] MEDPR65H02_env_samples_DQ062270 gi|67483485|gb|DQ062270| Uncultured bacterium clone MEDPR65H02 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR65H02 proteorhodopsin gene, partial cds DQ062270 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na AGATACATAGACTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCTGTCGGAAGTGCTTCTGGCGGTATCTTCTGGAGACTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAAGCTGGATACATCAACCTATGGGCTGGTTTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCTGCTGATAAAGCACCTGCTTCAGTTCAATCTGCTTTCTCAACAATGAGATGGATCGTAACAATTGGTTGGGCTATTTATCCA RYIDWLITVPLLMVEFYIILRAVGSASGGIFWRLMIGTLVMLVGGYMGEAGYINLWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCT---------GTC---GGAAGTGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACCTA------------------TGGGCTGGT---TTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCACCTGCTTCAGTT---CAA---TCT---GCT---TTC---TCA---ACAATG---AGATGGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYIILRA---V-GSASG-GI------------FWR-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NL------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ062282 [III-Alpha2-SAR11/Himb59] MEDPR82F10_env_samples_DQ062282 gi|67483509|gb|DQ062282| Uncultured bacterium clone MEDPR82F10 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR82F10 proteorhodopsin gene, partial cds DQ062282 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na AGATACATAGACTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCTGTCGGAAGTGCTTCTGGCGGTATCTTCTGGAGACTTATGATCGGTACACTAGTAATGCTGGTTGGTGGTTATATGGGTGAAGCTGGATACATCAACCTATGGGCTGGTTTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCTGCTGATAAAGCACCTGCTTCAGTTCAATCTGCTTTCTCAACAATGAGATGGATCGTAACAATTGGTTGGGCTATTTATCCA RYIDWLITVPLLMVEFYIILRAVGSASGGIFWRLMIGTLVMLVGGYMGEAGYINLWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCT---------GTC---GGAAGTGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCTGGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACCTA------------------TGGGCTGGT---TTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCACCTGCTTCAGTT---CAA---TCT---GCT---TTC---TCA---ACAATG---AGATGGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYIILRA---V-GSASG-GI------------FWR-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NL------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ422186 [III-Alpha2-SAR11/Himb59] clone_med-0m-d10_DQ422186 gi|90023892|gb|DQ422186| Uncultured bacterium clone med-0m-d10 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-d10 putative proteorhodopsin gene, partial cds. DQ422186 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCTGTCGGAAGTGCTTCTGGCGGTATCTTCTGGAGACTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAAGCTGGATACATCAACCTATGGGCTGGTTTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCTGCTGATAAAGCACCTGCTTCAGTTCAATCTGCTTTCTCAACAATGAGATGGATCGTAACAATTGGTTGGGCTATTTATCCA RYIDWLITVPLLMVEFYIILRAVGSASGGIFWRLMIGTLVMLVGGYMGEAGYINLWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCT---------GTC---GGAAGTGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACCTA------------------TGGGCTGGT---TTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCACCTGCTTCAGTT---CAA---TCT---GCT---TTC---TCA---ACAATG---AGATGGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYIILRA---V-GSASG-GI------------FWR-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NL------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ203380 [III-Alpha2-SAR11/Himb59] MedHO102D4_env_samples_DQ203380 gi|77547208|gb|DQ203380| Uncultured bacterium clone MedHO102D4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102D4 predicted proteorhodopsin gene, partial cds DQ203380 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGACTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATTATCCTAAGAGCTGTCGGAAATGCTTCTGGCGGTATCTTCTGGAGACTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAAGCTGGATACATCAATGAATGGGCTGGTTTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCTGCTGATAAAGCACCTGCTTCAGTTCAATCTGCTTTCTCAACAATGAGATGGATCGTTTCAATTGGTTGGGCCATTTATCCA SYIDWLITVPLLMVEFYIILRAVGNASGGIFWRLMIGTLVMLVGGYMGEAGYINEWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQSAFSTMRWIVSIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGACTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATTATCCTAAGAGCT---------GTC---GGAAATGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGAA------------------TGGGCTGGT---TTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCACCTGCTTCAGTT---CAA---TCT---GCT---TTC---TCA---ACAATG---AGATGGATCGTTTCAATT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMVEFYIILRA---V-GNASG-GI------------FWR-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NE------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-S-A-F-S-TM-RWIVSI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ203606 [III-Alpha2-SAR11/Himb59] medHO120C4_env_samples_DQ203606 gi|77547660|gb|DQ203606| Uncultured bacterium clone medHO120C4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120C4 predicted proteorhodopsin gene, partial cds DQ203606 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCTGTCGGAAATGCTTCTGGCGGTATCTTCTGGAGACTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAAGCTGGATACATCAACGAATGGGCTGGTTTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCTGCTGATAAAGCACCTGCTTCAGTTCAATCTGCTTTCTCAACAATGAGATGGATCGTTTCAATTGGTTGGGCCATTTATCCA RYIDWLITVPLLMVEFYIILRAVGNASGGIFWRLMIGTLVMLVGGYMGEAGYINEWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQSAFSTMRWIVSIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCT---------GTC---GGAAATGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGAA------------------TGGGCTGGT---TTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCACCTGCTTCAGTT---CAA---TCT---GCT---TTC---TCA---ACAATG---AGATGGATCGTTTCAATT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYIILRA---V-GNASG-GI------------FWR-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NE------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-S-A-F-S-TM-RWIVSI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ203604 [III-Alpha2-SAR11/Himb59] medHO120C12_env_samples_DQ203604 gi|77547656|gb|DQ203604| Uncultured bacterium clone medHO120C12 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120C12 predicted proteorhodopsin gene, partial cds DQ203604 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCTGTCGGAAATGCTTCTGGCGGTATCTTCTGGAGACTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAAGCTGGATACATCAACGAATGGGCTGGTTTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCTGCTGATAAAGCACCTGCTTCAGTTCAATCTGCTTTCTCAACAATGAGATGGATCGTTTCAATTGGTTGGGCCATTTATCCA RYIDWLITVPLLMVEFYIILRAVGNASGGIFWRLMIGTLVMLVGGYMGEAGYINEWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQSAFSTMRWIVSIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCT---------GTC---GGAAATGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGAA------------------TGGGCTGGT---TTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCACCTGCTTCAGTT---CAA---TCT---GCT---TTC---TCA---ACAATG---AGATGGATCGTTTCAATT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYIILRA---V-GNASG-GI------------FWR-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NE------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-S-A-F-S-TM-RWIVSI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_1112697297953 [III-Alpha2-SAR11/Himb59] JCVI_ORF_1112697297953_GS048a_Coral_Reef_2m jcvi|1112697297953| 1112697297953 JCVI ORF 1112697297953 1112697297953 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 17-MAY-2004 Coral_Reef/2m_depth/S_35.1_psu/GS048a/Moorea/Cooks_Bay/Polynesia_Archipelagos Pacific Ocean marine -17.475834 -149.81223 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf GCATCTCTATTGTTGGTATTACCTCAGTTCGCTAACGCAGCTGCGAACTTAGAATCCGACGATTTCGTTGGTATTTCATTTTGGCTGATTTCTATGGCCCTAGTCGCTTCAACAGCATTCTTCTTTTTAGAGACTCAGAGAGTTTCTGCTAAGTGGAAAACTTCACTAACAGTATCTGGTCTAGTTACTTTAGTTGCTGCTGTTCACTATTTCTATATGCGTGATGTATGGATCGCAACAGGCGATACACCAACCGTATACAGATATATTGACTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCTGTTGGAAATGCTTCTGGCGGTATCTTCTGGAGACTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAAGCTGGATACATCAACGAATGGGCTGGTTTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCTGCTGATAAAGCGCCTGCTTCAGTTCAATCTGCTTTCTCAACAATGAGATGGATCGTTTCAATTGGTTGGGCTATTTATCCTTTAGGATATTTCTTTGGTTATTTAACAGGCGGAGCAAGCATGGAATCTCTAAACGTTATCTATAACCTTGCTGACGTTCTAAACAAGATTGCATTCGGTGTAATCATCTGGAATGTTGCAACAGTAGAATCTAAAGCT ASLLLVLPQFANAAANLESDDFVGISFWLISMALVASTAFFFLETQRVSAKWKTSLTVSGLVTLVAAVHYFYMRDVWIATGDTPTVYRYIDWLITVPLLMVEFYIILRAVGNASGGIFWRLMIGTLVMLVGGYMGEAGYINEWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQSAFSTMRWIVSIGWAIYPLGYFFGYLTGGASMESLNVIYNLADVLNKIAFGVIIWNVATVESKA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATCTCTATTGTTGGTATTACCTCAGTTCGCTAACGCAGCTGCGAACTTAGAATCCGACGATTTCGTTGGTATTTCATTTTGGCTGATTTCTATGGCCCTAGTCGCTTCAACAGCATTCTTCTTTTTAGAGACTCAGAGAGTTTCTGCT---AAGTGGAAAACTTCACTAACAGTATCTGGTCTAGTTACTTTAGTTGCTGCTGTTCACTATTTCTATATGCGTGATGTATGGATC------------------------------GCAACA---------------------GGCGATACACCAACCGTATACAGATATATTGACTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCT---------GTT---GGAAATGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGAA------------------TGGGCTGGT---TTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCGCCTGCTTCAGTT---CAA---TCT---GCT---TTC---TCA---ACAATG---AGATGGATCGTTTCAATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCTTTAGGATATTTCTTTGGTTATTTA---------------------------------------ACAGGCGGAGCAAGCATGGAATCTCTAAACGTTATCTATAACCTTGCTGACGTTCTAAACAAGATTGCATTCGGTGTAATCATCTGGAATGTTGCAACAGTAGAA---TCTAAAGCT------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------ASLLLVLPQFANAAANLESDDFVGISFWLISMALVASTAFFFLETQRVSA-KWKTSLTVSGLVTLVAAVHYFYMRDVWI----------AT-------GDTPTVYRYIDW--------LITVPLLMVEFYIILRA---V-GNASG-GI------------FWR-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NE------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-S-A-F-S-TM-RWIVSI---------------------GW---AIYPLGYFFGYL-------------TGGASMESLNVIYNLADVLNKIAFGVIIWNVATVE-SKA-------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ203410 [III-Alpha2-SAR11/Himb59] MedHO102G10_env_samples_DQ203410 gi|77547268|gb|DQ203410| Uncultured bacterium clone MedHO102G10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102G10 predicted proteorhodopsin gene, partial cds DQ203410 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGACTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCTGTCGGAAGTGCTTCTGGCGGTATCTTCTGGAGACTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAAGCTGGATACATCAACTTATGGGCTGGTTTCATCGTAGGTATGGCTGGTTGGGCATATATCTTGCATGAGGTATTTGCTGGCGAAGCTGGAAAAATGGCTGCTGATAAAGCACCTGCTTCACTTCAATCTGCTTTCTCAACACTGAGATGGATCGGTACAACTGGTTGGGCCATTTATCCG SYIDWLITVPLLMVEFYIILRAVGSASGGIFWRLMIGTLVMLVGGYMGEAGYINLWAGFIVGMAGWAYILHEVFAGEAGKMAADKAPASLQSAFSTLRWIGTTGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGACTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCT---------GTC---GGAAGTGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACTTA------------------TGGGCTGGT---TTCATCGTAGGTATGGCTGGTTGGGCATATATCTTGCATGAGGTA---------------TTT------GCT---GGCGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCACCTGCTTCACTT---CAA---TCT---GCT---TTC---TCA---ACACTG---AGATGGATCGGTACAACT---------------------------------------------------------------GGTTGG---------GCCATTTATCCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMVEFYIILRA---V-GSASG-GI------------FWR-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NL------WAG-FIVGMAGWAYILHEV-----F--A-GEAGKMAAD--K-APASL-Q-S-A-F-S-TL-RWIGTT---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ203351 [III-Alpha2-SAR11/Himb59] MedHO102A9_env_samples_DQ203351 gi|77547150|gb|DQ203351| Uncultured bacterium clone MedHO102A9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102A9 predicted proteorhodopsin gene, partial cds DQ203351 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGACTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCTGTCGGAAGTGCTTCTGGCGGTATTTTCTGGAGACTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAAGCTGGATACATCAACGAATGGGCTGGTTTCATCGTTGGTATGGCTGGTTGGGCATACATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCTGCTGATAAAGCACCTGCTTCAGTTCAACAAGCTTTCTCAACAATGAGATGGATCGTAACAATTGGTTGGGCCATTTATCCA RYIDWLITVPLLMVEFYIILRAVGSASGGIFWRLMIGTLVMLVGGYMGEAGYINEWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQQAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGACTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCT---------GTC---GGAAGTGCTTCTGGC---GGTATT------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGAA------------------TGGGCTGGT---TTCATCGTTGGTATGGCTGGTTGGGCATACATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCACCTGCTTCAGTT---CAA---CAA---GCT---TTC---TCA---ACAATG---AGATGGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYIILRA---V-GSASG-GI------------FWR-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NE------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-Q-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ422240 [III-Alpha2-SAR11/Himb59] clone_med-0m-h7_DQ422240 gi|90024000|gb|DQ422240| Uncultured bacterium clone med-0m-h7 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-h7 putative proteorhodopsin gene, partial cds. DQ422240 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCTGTCGGAAGTGCTTCTGGCGGTATCTTCTGGAGACTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAAGCTGGATACATTAACCAGTGGGCAGGTTTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCTGCTGATAAAGCACCTGCTTCAGTTCAACAAGCTTTCTCAACAATGAGATGGATCGTAACAATTGGTTGGGCTATTTATCCA RYIDWLITVPLLMVEFYIILRAVGSASGGIFWRLMIGTLVMLVGGYMGEAGYINQWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQQAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCT---------GTC---GGAAGTGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACCAG------------------TGGGCAGGT---TTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCACCTGCTTCAGTT---CAA---CAA---GCT---TTC---TCA---ACAATG---AGATGGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYIILRA---V-GSASG-GI------------FWR-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NQ------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-Q-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ422276 [III-Alpha2-SAR11/Himb59] clone_med-20m-c11_DQ422276 gi|90024072|gb|DQ422276| Uncultured bacterium clone med-20m-c11 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-c11 putative proteorhodopsin gene, partial cds. DQ422276 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCTGTCGGAAGTGCTTCTGGCGGTATCTTCTGGAGACTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAAGCTGGATACATTAACCAGTGGGCAGGTTTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCTGCTGATAAAGCACCTGCTTCAGTTCAACAAGCTTTCTCAACAATGAGATGGATCGTAACAATTGGTTGGGCTATTTATCCA RYIDWLITVPLLMVEFYIILRAVGSASGGIFWRLMIGTLVMLVGGYMGEAGYINQWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQQAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCT---------GTC---GGAAGTGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACCAG------------------TGGGCAGGT---TTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCACCTGCTTCAGTT---CAA---CAA---GCT---TTC---TCA---ACAATG---AGATGGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYIILRA---V-GSASG-GI------------FWR-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NQ------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-Q-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ422399 [III-Alpha2-SAR11/Himb59] clone_med-50m-d8_DQ422399 gi|90024318|gb|DQ422399| Uncultured bacterium clone med-50m-d8 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-d8 putative proteorhodopsin gene, partial cds. DQ422399 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCTGTCGGAAGTGCTTCTGGCGGTATCTTCTGGAGACTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAAGCTGGATACATTAACCAGTGGGCAGGTTTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCTGCTGATAAAGCACCTGCTTCAGTTCAACAAGCTTTCTCAACAATGAGATGGATCGTAACAATTGGTTGGGCTATTTATCCA RYIDWLITVPLLMVEFYIILRAVGSASGGIFWRLMIGTLVMLVGGYMGEAGYINQWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQQAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCT---------GTC---GGAAGTGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACCAG------------------TGGGCAGGT---TTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCACCTGCTTCAGTT---CAA---CAA---GCT---TTC---TCA---ACAATG---AGATGGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYIILRA---V-GSASG-GI------------FWR-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NQ------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-Q-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ422449 [III-Alpha2-SAR11/Himb59] clone_med-tb04-50m-a10_DQ422449 gi|90024418|gb|DQ422449| Uncultured bacterium clone med-tb04-50m-a10 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-a10 putative proteorhodopsin gene, partial cds. DQ422449 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCTGTCGGAAGTGCTTCTGGCGGTATCTTCTGGAGACTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAAGCTGGATACATTAACCAGTGGGCAGGTTTCATAGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCTGCTGATAAAGCACCTGCTTCAGTTCAACAAGCTTTCTCAACAATGAGATGGATCGTAACAATTGGTTGGGCTATTTATCCA RYIDWLITVPLLMVEFYIILRAVGSASGGIFWRLMIGTLVMLVGGYMGEAGYINQWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQQAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCT---------GTC---GGAAGTGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACCAG------------------TGGGCAGGT---TTCATAGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCACCTGCTTCAGTT---CAA---CAA---GCT---TTC---TCA---ACAATG---AGATGGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYIILRA---V-GSASG-GI------------FWR-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NQ------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-Q-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ422321 [III-Alpha2-SAR11/Himb59] clone_med-20m-g1_DQ422321 gi|90024162|gb|DQ422321| Uncultured bacterium clone med-20m-g1 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-g1 putative proteorhodopsin gene, partial cds. DQ422321 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCTGTCGGAAGTGCTTCTGGCGGTATCTTCTGGAGACTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAAGCTGGATACATTAACCAGTGGGCAGGTTTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCTGCTGATAAAGCACCTGCTTCAGTTCAACAAGCTTTCTCAACAATGAGATGGATCGTAACAATTGGTTGGGCTATTTATCCA RYIDWLITVPLLMVEFYIILRAVGSASGGIFWRLMIGTLVMLVGGYMGEAGYINQWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQQAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCT---------GTC---GGAAGTGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACCAG------------------TGGGCAGGT---TTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCACCTGCTTCAGTT---CAA---CAA---GCT---TTC---TCA---ACAATG---AGATGGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYIILRA---V-GSASG-GI------------FWR-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NQ------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-Q-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ062289 [III-Alpha2-SAR11/Himb59] MEDPR98G6_env_samples_DQ062289 gi|67483523|gb|DQ062289| Uncultured bacterium clone MEDPR98G6 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR98G6 proteorhodopsin gene, partial cds DQ062289 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na AGGTACATTGATTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCTGTCGGAAGTGCTTCTGGCGGTATCTTCTGGAGACTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAAGCTGGATACATTAACCAGTGGGCAGGTTTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCTGCTGATAAAGCACCTGCTTCAGTTCAACAAGCTTTCTCAACAATGAGATGGATCGTAACAATTGGTTGGGCCATTTATCCA RYIDWLITVPLLMVEFYIILRAVGSASGGIFWRLMIGTLVMLVGGYMGEAGYINQWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQQAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATTGATTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCT---------GTC---GGAAGTGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACCAG------------------TGGGCAGGT---TTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCACCTGCTTCAGTT---CAA---CAA---GCT---TTC---TCA---ACAATG---AGATGGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYIILRA---V-GSASG-GI------------FWR-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NQ------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-Q-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ422422 [III-Alpha2-SAR11/Himb59] clone_med-50m-f8_DQ422422 gi|90024364|gb|DQ422422| Uncultured bacterium clone med-50m-f8 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-f8 putative proteorhodopsin gene, partial cds. DQ422422 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCTGTCGGAAGTGCTTCTGGCGGTATCTTCTGGAGACTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAAGCTGGATACATTAACCAGTGGGCAGGTTTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCTGCTGATAAAGCACCTGCTTCAGTTCAACAAGCTTTCTCAACAATGAGATGGATCGTAACAATTGGTTGGGCTATTTATCCA RYIDWLITVPLLMVEFYIILRAVGSASGGIFWRLMIGTLVMLVGGYMGEAGYINQWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQQAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCT---------GTC---GGAAGTGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACCAG------------------TGGGCAGGT---TTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCACCTGCTTCAGTT---CAA---CAA---GCT---TTC---TCA---ACAATG---AGATGGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYIILRA---V-GSASG-GI------------FWR-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NQ------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-Q-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ422277 [III-Alpha2-SAR11/Himb59] clone_med-20m-c12_DQ422277 gi|90024074|gb|DQ422277| Uncultured bacterium clone med-20m-c12 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-c12 putative proteorhodopsin gene, partial cds. DQ422277 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCTGTCGGAAGTGCTTCTGGCGGTATCTTCTGGAGACTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAAGCTGGATACATTAACCAGTGGGCAGGTTTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCTGCTGATAAAGCACCTGCTTCAGTTCAACAAGCTTTCTCAACAATGAGATGGATCGTAACAATTGGTTGGGCTATTTATCCA RYIDWLITVPLLMVEFYIILRAVGSASGGIFWRLMIGTLVMLVGGYMGEAGYINQWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQQAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCT---------GTC---GGAAGTGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACCAG------------------TGGGCAGGT---TTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCACCTGCTTCAGTT---CAA---CAA---GCT---TTC---TCA---ACAATG---AGATGGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYIILRA---V-GSASG-GI------------FWR-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NQ------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-Q-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ062245 [III-Alpha2-SAR11/Himb59] MEDPR4_env_samples_DQ062245 gi|67483435|gb|DQ062245| Uncultured bacterium clone MEDPR4 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR4 proteorhodopsin gene, partial cds DQ062245 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na AGATACATTGACTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTTAGAGCTGTCGGAAGTGCTTCTGGCGGTATCTTCTGGAGACTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAAGCTGGATACATCAACCAGTGGGCAGGTTTCATAGTTGGTATGGCTGGATGGGCATATATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCTGCTGATAAAGCGCCTGCTTCGGTTCAACAAGCTTTCTCAACAATGAGATGGATCGTAACAATTGGTTGGGCTATTTATCCA RYIDWLITVPLLMVEFYIILRAVGSASGGIFWRLMIGTLVMLVGGYMGEAGYINQWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQQAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTTAGAGCT---------GTC---GGAAGTGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACCAG------------------TGGGCAGGT---TTCATAGTTGGTATGGCTGGATGGGCATATATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCGCCTGCTTCGGTT---CAA---CAA---GCT---TTC---TCA---ACAATG---AGATGGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYIILRA---V-GSASG-GI------------FWR-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NQ------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-Q-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ422288 [III-Alpha2-SAR11/Himb59] clone_med-20m-d11_DQ422288 gi|90024096|gb|DQ422288| Uncultured bacterium clone med-20m-d11 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-d11 putative proteorhodopsin gene, partial cds. DQ422288 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTTAGAGCTGTCGGAAGTGCTTCTGGCGGTATCTTCTGGGGACTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAAGCTGGATACATCAACCAGTGGGCAGGTTTCATAGTTGGTATGGCTGGATGGGCATATATCTTATATGAGGTATTTGCTGGAGAAGCTGGAAAAATGGCTGCTGATAAAGCGCCTGCTTCGGTTCAACAAGCTTTCTCAACAATGAGATGGATCGTAACAATTGGTTGGGCTATTTATCCA RYIDWLITVPLLMVEFYIILRAVGSASGGIFWGLMIGTLVMLVGGYMGEAGYINQWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQQAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTTAGAGCT---------GTC---GGAAGTGCTTCTGGC---GGTATC------------------------------------TTCTGGGGA---CTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACCAG------------------TGGGCAGGT---TTCATAGTTGGTATGGCTGGATGGGCATATATCTTATATGAGGTA---------------TTT------GCT---GGAGAAGCTGGAAAAATGGCTGCTGAT------AAA---GCGCCTGCTTCGGTT---CAA---CAA---GCT---TTC---TCA---ACAATG---AGATGGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYIILRA---V-GSASG-GI------------FWG-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NQ------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-Q-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_DQ203419 [III-Alpha2-SAR11/Himb59] MedHO102G9_env_samples_DQ203419 gi|77547286|gb|DQ203419| Uncultured bacterium clone MedHO102G9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102G9 predicted proteorhodopsin gene, partial cds DQ203419 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGATTGGCTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCTGTCGGAAGTGCTTCTGGCGGTATCTTCTGGAGACTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAAGCTGGATACATCAACCAGTGGGCAGGTTTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTATTTGCTGGTGAGGCTGGAAAAATGGCTGCTGATAAAGCGCCTGCTTCTGTTCAACAAGCTTTCTCAACAATGAGATGGATCGTAACAATTGGTTGGGCAATATATCCA SYIDWLITVPLLMVEFYIILRAVGSASGGIFWRLMIGTLVMLVGGYMGEAGYINQWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQQAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGATTGG------------------------CTAATCACTGTTCCATTATTGATGGTTGAATTCTACATCATCCTAAGAGCT---------GTC---GGAAGTGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTTATGATCGGTACACTAGTAATGCTAGTTGGTGGTTATATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACCAG------------------TGGGCAGGT---TTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTA---------------TTT------GCT---GGTGAGGCTGGAAAAATGGCTGCTGAT------AAA---GCGCCTGCTTCTGTT---CAA---CAA---GCT---TTC---TCA---ACAATG---AGATGGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMVEFYIILRA---V-GSASG-GI------------FWR-LMIGTLVMLVGGYMGE---A------G--Y-----------I----------------------NQ------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-Q-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_1105087850064 [III-Alpha2-SAR11/Himb59] JCVI_ORF_1105087850064 jcvi|1105087850064| 1105087850064 JCVI ORF 1105087850064 1105087850064 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 08-FEB-2004 Coastal/3m_depth/S_34.5_psu/GS029/North_James_Bay/Santigo_Island/Galapagos_Islands Pacific Ocean marine -0.2 -90.83528 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf CTGATTTCTATGGCCCTAGTTGCTTCAACAGCATTTTTCTTCTTAGAGACTCAAAGAGTGAGCGCTAAGTGGAAAACTTCACTAACAGTATCTGGTCTGGTTACTTTGGTTGCTGCTGTTCACTATTTCTATATGCGTGATGTATGGATTGCTACAGGCGATACACCAACAGTTTACAGATATATTGACTGGTTAATCACTGTTCCATTATTGATGGTTGAGTTCTACATCATCCTAAGAGCTGTCGGAAATGCTTCTGGCGGTATCTTCTGGAGACTAATGATCGGTTCTTTGGTCATGCTAGTTGCAGGTTACATGGGTGAAGCAGGTTACATCAATGCATGGGCAGGTTTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCATCTGATAAGGCGCCTGCTTCAGTTCAACAAGCTTTCTCAACAATGAGATGGATCGTAACAATTGGTTGGGCTATTTATCCTTTAGGATATTTCTTTGGTTATTTAACAGGCGGAGCAAGCATGGAATCTCTAAACGTTATCTATAACCTTGCTGACGTTCTAAACAAAATTGCATTTGGTGTAATTATTTGGAATGTAGCAACAACAGAATCTAAAGCT LISMALVASTAFFFLETQRVSAKWKTSLTVSGLVTLVAAVHYFYMRDVWIATGDTPTVYRYIDWLITVPLLMVEFYIILRAVGNASGGIFWRLMIGSLVMLVAGYMGEAGYINAWAGFIVGMAGWAYILYEVFAGEAGKMASDKAPASVQQAFSTMRWIVTIGWAIYPLGYFFGYLTGGASMESLNVIYNLADVLNKIAFGVIIWNVATTESKA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTTCTATGGCCCTAGTTGCTTCAACAGCATTTTTCTTCTTAGAGACTCAAAGAGTGAGCGCT---AAGTGGAAAACTTCACTAACAGTATCTGGTCTGGTTACTTTGGTTGCTGCTGTTCACTATTTCTATATGCGTGATGTATGGATT------------------------------GCTACA---------------------GGCGATACACCAACAGTTTACAGATATATTGACTGG------------------------TTAATCACTGTTCCATTATTGATGGTTGAGTTCTACATCATCCTAAGAGCT---------GTC---GGAAATGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTAATGATCGGTTCTTTGGTCATGCTAGTTGCAGGTTACATGGGTGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGCAGGT---TTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCATCTGAT------AAG---GCGCCTGCTTCAGTT---CAA---CAA---GCT---TTC---TCA---ACAATG---AGATGGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCTTTAGGATATTTCTTTGGTTATTTA---------------------------------------ACAGGCGGAGCAAGCATGGAATCTCTAAACGTTATCTATAACCTTGCTGACGTTCTAAACAAAATTGCATTTGGTGTAATTATTTGGAATGTAGCAACAACAGAA---TCTAAAGCT------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------LISMALVASTAFFFLETQRVSA-KWKTSLTVSGLVTLVAAVHYFYMRDVWI----------AT-------GDTPTVYRYIDW--------LITVPLLMVEFYIILRA---V-GNASG-GI------------FWR-LMIGSLVMLVAGYMGE---A------G--Y-----------I----------------------NA------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMASD--K-APASV-Q-Q-A-F-S-TM-RWIVTI---------------------GW---AIYPLGYFFGYL-------------TGGASMESLNVIYNLADVLNKIAFGVIIWNVATTE-SKA-------------------------------------- [III-Alpha2-SAR11/Himb59]_1105100884556 [III-Alpha2-SAR11/Himb59] JCVI_ORF_1105100884556_GS029_Coastal_3m jcvi|1105100884556| 1105100884556 JCVI ORF 1105100884556 1105100884556 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 08-FEB-2004 Coastal/3m_depth/S_34.5_psu/GS029/North_James_Bay/Santigo_Island/Galapagos_Islands Pacific Ocean marine -0.2 -90.83528 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf AAGGTGGGAGTCGGTAATAAAAGGAGTAGTACTCTTATGTTTAAAATAAAAACCCTATTACCAGCATCTTTATTGTTGGTATTACCTCAGTTCGCAAACGCTGCTGCGAATCTTGAGTCCAGCGATTTCGTTGGAATTTCATTTTGGCTGATTTCTATGGCCCTAGTTGCTTCAACAGCATTTTTCTTCTTAGAGACTCAAAGAGTGAGCGCTAAGTGGAAAACTTCACTAACAGTATCTGGTCTGGTTACTTTGGTTGCTGCTGTTCACTATTTCTATATGCGTGATGTATGGATTGCTACAGGCGATACACCAACAGTTTACAGATATATTGACTGGTTAATCACTGTTCCATTATTGATGGTTGAGTTCTACATCATCCTAAGAGCTGTCGGAAATGCTTCTGGCGGTATCTTCTGGAGACTAATGATCGGTTCTTTGGTCATGCTAGTTGCAGGTTACATGGGTGAAGCAGGTTACATCAATGCATGGGCAGGTTTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTATTTGCTGGTGAAGCTGGAAAAATGGCATCTGATAAGGCGCCTGCTTCAGTTCAACAAGCTTTCTCAACAATGAGATGGATCGTAACAATTGGTTGGGCTATTTATCCTTTAGGATATTTCTTTGGTTATTTAACAGGCGGAGCAAGCATGGAATCTCTAAACGTTATCTATAACCTTGCTGACGTTCTAAACAAAATTGCATTTGGTGTAATTATTTGGAATGTAGCAACAACAGAATCTAAAGCT KVGVGNKRSSTLMFKIKTLLPASLLLVLPQFANAAANLESSDFVGISFWLISMALVASTAFFFLETQRVSAKWKTSLTVSGLVTLVAAVHYFYMRDVWIATGDTPTVYRYIDWLITVPLLMVEFYIILRAVGNASGGIFWRLMIGSLVMLVAGYMGEAGYINAWAGFIVGMAGWAYILYEVFAGEAGKMASDKAPASVQQAFSTMRWIVTIGWAIYPLGYFFGYLTGGASMESLNVIYNLADVLNKIAFGVIIWNVATTESKA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGGTGGGAGTCGGTAATAAAAGGAGTAGTACTCTTATGTTTAAAATAAAAACCCTATTACCAGCATCTTTATTGTTGGTATTACCTCAGTTCGCAAACGCTGCTGCGAATCTTGAGTCCAGCGATTTCGTTGGAATTTCATTTTGGCTGATTTCTATGGCCCTAGTTGCTTCAACAGCATTTTTCTTCTTAGAGACTCAAAGAGTGAGCGCT---AAGTGGAAAACTTCACTAACAGTATCTGGTCTGGTTACTTTGGTTGCTGCTGTTCACTATTTCTATATGCGTGATGTATGGATT------------------------------GCTACA---------------------GGCGATACACCAACAGTTTACAGATATATTGACTGG------------------------TTAATCACTGTTCCATTATTGATGGTTGAGTTCTACATCATCCTAAGAGCT---------GTC---GGAAATGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTAATGATCGGTTCTTTGGTCATGCTAGTTGCAGGTTACATGGGTGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGCAGGT---TTCATCGTTGGTATGGCTGGTTGGGCATATATCTTATATGAGGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCATCTGAT------AAG---GCGCCTGCTTCAGTT---CAA---CAA---GCT---TTC---TCA---ACAATG---AGATGGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCTTTAGGATATTTCTTTGGTTATTTA---------------------------------------ACAGGCGGAGCAAGCATGGAATCTCTAAACGTTATCTATAACCTTGCTGACGTTCTAAACAAAATTGCATTTGGTGTAATTATTTGGAATGTAGCAACAACAGAA---TCTAAAGCT------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------KVGVGNKRSSTLMFKIKTLLPASLLLVLPQFANAAANLESSDFVGISFWLISMALVASTAFFFLETQRVSA-KWKTSLTVSGLVTLVAAVHYFYMRDVWI----------AT-------GDTPTVYRYIDW--------LITVPLLMVEFYIILRA---V-GNASG-GI------------FWR-LMIGSLVMLVAGYMGE---A------G--Y-----------I----------------------NA------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMASD--K-APASV-Q-Q-A-F-S-TM-RWIVTI---------------------GW---AIYPLGYFFGYL-------------TGGASMESLNVIYNLADVLNKIAFGVIIWNVATTE-SKA-------------------------------------- [III-Alpha2-SAR11/Himb59]_1105096254838 [III-Alpha2-SAR11/Himb59] JCVI_ORF_1105096254838 jcvi|1105096254838| 1105096254838 JCVI ORF 1105096254838 1105096254838 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 16-nov-03 Coastal/1m_depth/S_26.5_psu/GS008/Newport_Harbor/RI/North_American_East_Coast Atlantic Ocean marine 41.485832 -71.35111 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATCTCATTTTGGTTAATTTCAATGGCGCTTGTTGCGTCTACAGCTTTTTTCTTCTTAGAAACTCAAAGAGTTAGCGCTAAGTGGAAAACATCTCTAACAGTTTCCGGATTGGTTACTTTAGTTGCTGCTGTTCACTATTTCTATATGCGTGATGTATGGATCTCAACAGGAGATACACCAACAGTATATAGATACATCGATTGGTTAATTACTGTGCCTCTATTGATGGTTGAATTCTACATCATCCTAAGAGCTGTTGGAAATGCTTCTGGCGGTATCTTCTGGAGACTAATGATCGGTTCTTTGGTCATGTTAGTTGCTGGATACATGGGTGAAGCTGGATACATCAATGCATGGGCAGGTTTCATCGTTGGTATGGCTGGTTGGGCATATATCTTGTATGAAGTATTTGCTGGTGAAGCTGGAAAAATGGCTTCTGATAAAGCTCCTGCTTCAGTTCAACAAGCATTCTCAACAATGAGATGGATCGTAACAATTGGTTGGGCTATTTATCCTTTAGGATATTTCTTTGGCTATTTAACAGGTGGAGCAAGTATGGAGTCTCTTAATGTTATTTATAACCTAGCTGATGTTTTAAATAAGATCGCATTTGGTGTGATTATCTGGAACGTTGCTACAACAGAATCTAAAGCT ISFWLISMALVASTAFFFLETQRVSAKWKTSLTVSGLVTLVAAVHYFYMRDVWISTGDTPTVYRYIDWLITVPLLMVEFYIILRAVGNASGGIFWRLMIGSLVMLVAGYMGEAGYINAWAGFIVGMAGWAYILYEVFAGEAGKMASDKAPASVQQAFSTMRWIVTIGWAIYPLGYFFGYLTGGASMESLNVIYNLADVLNKIAFGVIIWNVATTESKA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTCATTTTGGTTAATTTCAATGGCGCTTGTTGCGTCTACAGCTTTTTTCTTCTTAGAAACTCAAAGAGTTAGCGCT---AAGTGGAAAACATCTCTAACAGTTTCCGGATTGGTTACTTTAGTTGCTGCTGTTCACTATTTCTATATGCGTGATGTATGGATC------------------------------TCAACA---------------------GGAGATACACCAACAGTATATAGATACATCGATTGG------------------------TTAATTACTGTGCCTCTATTGATGGTTGAATTCTACATCATCCTAAGAGCT---------GTT---GGAAATGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTAATGATCGGTTCTTTGGTCATGTTAGTTGCTGGATACATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGCAGGT---TTCATCGTTGGTATGGCTGGTTGGGCATATATCTTGTATGAAGTA---------------TTT------GCT---GGTGAAGCTGGAAAAATGGCTTCTGAT------AAA---GCTCCTGCTTCAGTT---CAA---CAA---GCA---TTC---TCA---ACAATG---AGATGGATCGTAACAATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCTTTAGGATATTTCTTTGGCTATTTA---------------------------------------ACAGGTGGAGCAAGTATGGAGTCTCTTAATGTTATTTATAACCTAGCTGATGTTTTAAATAAGATCGCATTTGGTGTGATTATCTGGAACGTTGCTACAACAGAA---TCTAAAGCT------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------ISFWLISMALVASTAFFFLETQRVSA-KWKTSLTVSGLVTLVAAVHYFYMRDVWI----------ST-------GDTPTVYRYIDW--------LITVPLLMVEFYIILRA---V-GNASG-GI------------FWR-LMIGSLVMLVAGYMGE---A------G--Y-----------I----------------------NA------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMASD--K-APASV-Q-Q-A-F-S-TM-RWIVTI---------------------GW---AIYPLGYFFGYL-------------TGGASMESLNVIYNLADVLNKIAFGVIIWNVATTE-SKA-------------------------------------- [III-Alpha2-a]_1105159010380 [III-Alpha2-a] JCVI_ORF_1105159010380 jcvi|1105159010380| 1105159010380 JCVI ORF 1105159010380 1105159010380 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 21-AUG-2003 Coastal/1m_depth/S_29.2_psu/GS002/Gulf_of_Maine/North_American_East_Coast Atlantic Ocean marine 42.503056 -67.24 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGTTTAAGTTTTTAAAACTAACTGTACCAGCATCAATTCTCGTGATGGCGCCGGCAATTGCCTCCGCTGCTGAGAATTTAGCACAAGACGATTTTGTTGGTATTTCTTTTTGGCTGATTTCAATGGCACTTGTTGCTTCAACAGCCTTCTTCTTCTTAGAGACTCAAAGAGTTTCTGCTAAGTGGAAAACATCATTAACTGTATCTGGTTTAGTTACACTTGTTGCAGCAGTTCACTATTTCTATATGAGAGATGTGTGGATCGCTACAGGTGAAACACCAACAGTTTACAGATATATTGACTGGTTAATTACAGTTCCTCTTTTAATGGTTGAATTCTACATTATCCTAAGAGCTATCGGAGCAGTTTCTGCAGGTATCTTCTGGAGATTAATGATTGGTTCAATGGTTATGTTAATCGCAGGCTATATGGGTGAAGCTGGTTACATCAATGCATGGGCTGGATTTATCGTAAGTATGGCTGGTTGGGCTTACATCTTGTATGAAGTTTTTGCTGGTGAAGCTGGTAAACTTGCTGCAGATAAAGCTCCTGCATCAGTTCAATCTGCTTTTAGCACAATGAGATGGATCGTTTCAATTGGTTGGGCTATTTATCCTTTAGGTTACTTCTTTGGTTACCTAACACGGTCAGCAGATGTTGAAATGTTAAATATATTTACAACTTTGCTGATGTTT MFKFLKLTVPASILVMAPAIASAAENLAQDDFVGISFWLISMALVASTAFFFLETQRVSAKWKTSLTVSGLVTLVAAVHYFYMRDVWIATGETPTVYRYIDWLITVPLLMVEFYIILRAIGAVSAGIFWRLMIGSMVMLIAGYMGEAGYINAWAGFIVSMAGWAYILYEVFAGEAGKLAADKAPASVQSAFSTMRWIVSIGWAIYPLGYFFGYLTRSADVEMLNIFTTLLMF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTTTAAGTTTTTAAAACTAACTGTACCAGCATCAATTCTCGTGATGGCGCCGGCAATTGCCTCCGCTGCTGAGAATTTAGCACAAGACGATTTTGTTGGTATTTCTTTTTGGCTGATTTCAATGGCACTTGTTGCTTCAACAGCCTTCTTCTTCTTAGAGACTCAAAGAGTTTCTGCT---AAGTGGAAAACATCATTAACTGTATCTGGTTTAGTTACACTTGTTGCAGCAGTTCACTATTTCTATATGAGAGATGTGTGGATC------------------------------GCTACA---------------------GGTGAAACACCAACAGTTTACAGATATATTGACTGG------------------------TTAATTACAGTTCCTCTTTTAATGGTTGAATTCTACATTATCCTAAGAGCT---------ATC---GGAGCAGTTTCTGCA---GGTATC------------------------------------TTCTGGAGA---TTAATGATTGGTTCAATGGTTATGTTAATCGCAGGCTATATGGGTGAA---------GCT------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGCTGGA---TTTATCGTAAGTATGGCTGGTTGGGCTTACATCTTGTATGAAGTT---------------TTT------GCT---GGTGAAGCTGGTAAACTTGCTGCAGAT------AAA---GCTCCTGCATCAGTT---CAA---TCT---GCT---TTT---AGC---ACAATG---AGATGGATCGTTTCAATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCTTTAGGTTACTTCTTTGGTTACCTA---------------------------------------ACACGGTCAGCAGATGTTGAAATGTTAAATATATTTACAACTTTG------------------CTGATGTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------MFKFLKLTVPASILVMAPAIASAAENLAQDDFVGISFWLISMALVASTAFFFLETQRVSA-KWKTSLTVSGLVTLVAAVHYFYMRDVWI----------AT-------GETPTVYRYIDW--------LITVPLLMVEFYIILRA---I-GAVSA-GI------------FWR-LMIGSMVMLIAGYMGE---A------G--Y-----------I----------------------NA------WAG-FIVSMAGWAYILYEV-----F--A-GEAGKLAAD--K-APASV-Q-S-A-F-S-TM-RWIVSI---------------------GW---AIYPLGYFFGYL-------------TRSADVEMLNIFTTL------LMF----------------------------------------------------- [III-Alpha2-a]_1105137074932 [III-Alpha2-a] JCVI_ORF_1105137074932_GS004_Coastal_2m jcvi|1105137074932| 1105137074932 JCVI ORF 1105137074932 1105137074932 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 22-AUG-2003 Coastal/2m_depth/S_28.3_psu/GS004/Outside_Halifax/Nova_Scotia/North_American_East_Coast Atlantic Ocean marine 44.137222 -63.644444 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGTTTAAGTTTTTAAAACTAACTGTACCAGCATCAATTCTCTTGATGGCGCCGGCAATTGCCTCCGCTGCTGAGAATTTAGCACAAGACGATTTTGTTGGTATTTCTTTTTGGCTGATTTCAATGGCACTTGTTGCTTCAACAGCCTTCTTCTTCCTAGAAACTCAAAGAGTTTCTGCTAAGTGGAAAACATCTTTAACTGTATCTGGTTTAGTTACACTAGTTGCAGCAGTTCACTATTTCTATATGAGAGATGTGTGGATCGCTACAGGTGAAACACCAACAGTATACAGATATATTGACTGGTTAATTACAGTTCCTCTTTTAATGGTTGAATTCTACATTATCCTAAGAGCTATCGGAGCAGTTTCTGCAGGTATCTTCTGGAGATTAATGATTGGTTCAATGGTTATGTTAATCGCAGGTTATATGGGCGAAGCTGGCTACATCAATGCATGGGCTGGATTTATCGTTGGTATGGCTGGTTGGGCTTACATCTTGTATGAAGTTTTTGCTGGTGAAGCTGGTAAACTTGCTGCAGATAAAGCTCCTGCATCAGTTCAATCTGCTTTTAGCACAATGAGATGGATCGTTTCAATTGGTTGGGCTATTTATCCTTTAGGTTACTTCTTTGGTTACCTAACAGGGTCAGCAGATGTTGAAATGTTAAATATCATTTACAACTTTGCTGATGTTTTAAATAAGATCGCTTTTGGTGTGATTATTTGGAACGTAGCTACATCTGAATCTAAAGCG MFKFLKLTVPASILLMAPAIASAAENLAQDDFVGISFWLISMALVASTAFFFLETQRVSAKWKTSLTVSGLVTLVAAVHYFYMRDVWIATGETPTVYRYIDWLITVPLLMVEFYIILRAIGAVSAGIFWRLMIGSMVMLIAGYMGEAGYINAWAGFIVGMAGWAYILYEVFAGEAGKLAADKAPASVQSAFSTMRWIVSIGWAIYPLGYFFGYLTGSADVEMLNIIYNFADVLNKIAFGVIIWNVATSESKA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTTTAAGTTTTTAAAACTAACTGTACCAGCATCAATTCTCTTGATGGCGCCGGCAATTGCCTCCGCTGCTGAGAATTTAGCACAAGACGATTTTGTTGGTATTTCTTTTTGGCTGATTTCAATGGCACTTGTTGCTTCAACAGCCTTCTTCTTCCTAGAAACTCAAAGAGTTTCTGCT---AAGTGGAAAACATCTTTAACTGTATCTGGTTTAGTTACACTAGTTGCAGCAGTTCACTATTTCTATATGAGAGATGTGTGGATC------------------------------GCTACA---------------------GGTGAAACACCAACAGTATACAGATATATTGACTGG------------------------TTAATTACAGTTCCTCTTTTAATGGTTGAATTCTACATTATCCTAAGAGCT---------ATC---GGAGCAGTTTCTGCA---GGTATC------------------------------------TTCTGGAGA---TTAATGATTGGTTCAATGGTTATGTTAATCGCAGGTTATATGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGCTGGA---TTTATCGTTGGTATGGCTGGTTGGGCTTACATCTTGTATGAAGTT---------------TTT------GCT---GGTGAAGCTGGTAAACTTGCTGCAGAT------AAA---GCTCCTGCATCAGTT---CAA---TCT---GCT---TTT---AGC---ACAATG---AGATGGATCGTTTCAATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCTTTAGGTTACTTCTTTGGTTACCTA---------------------------------------ACAGGGTCAGCAGATGTTGAAATGTTAAATATCATTTACAACTTTGCTGATGTTTTAAATAAGATCGCTTTTGGTGTGATTATTTGGAACGTAGCTACATCTGAA---TCTAAAGCG------------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------MFKFLKLTVPASILLMAPAIASAAENLAQDDFVGISFWLISMALVASTAFFFLETQRVSA-KWKTSLTVSGLVTLVAAVHYFYMRDVWI----------AT-------GETPTVYRYIDW--------LITVPLLMVEFYIILRA---I-GAVSA-GI------------FWR-LMIGSMVMLIAGYMGE---A------G--Y-----------I----------------------NA------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKLAAD--K-APASV-Q-S-A-F-S-TM-RWIVSI---------------------GW---AIYPLGYFFGYL-------------TGSADVEMLNIIYNFADVLNKIAFGVIIWNVATSE-SKA-------------------------------------- [III-Alpha2-a]_JX863328 [III-Alpha2-a] MALINA_OTU53_272_L_env_samples_JX863328 gi|425477606|gb|JX863328| Uncultured bacterium clone MALINA OTU53 272 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU53 272 L putative proteorhodopsin mRNA, partial cds JX863328 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 11Aug2009 3m_depth Arctic Ocean marine 70.68 -139.62 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATTACTGTTCCACTTCTTATGGTTGAATTTTACATTATCCTTAGAGCTGTCGGCGCTGTTTCAATTGGTATCTTCTGGAGATTAATGATTGGTACATTAGTAATGCTAGTTGCTGGTTATCTTGGCGAAGTCGGTGCTATCAATGCATGGGCTGGATTTATCGTTGGTATGGCTGGTTGGGCTTACATCTTGTATGAAGTTTTTGCTGGTGAAGCTGGTAAACTTGCTGCAGATAAAGCTCCTGCATCAGTACAATCTGCTTTCTCATCAATGAGATGGATTGTATCAATT WLITVPLLMVEFYIILRAVGAVSIGIFWRLMIGTLVMLVAGYLGEVGAINAWAGFIVGMAGWAYILYEVFAGEAGKLAADKAPASVQSAFSSMRWIVSI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATTACTGTTCCACTTCTTATGGTTGAATTTTACATTATCCTTAGAGCT---------GTC---GGCGCTGTTTCAATT---GGTATC------------------------------------TTCTGGAGA---TTAATGATTGGTACATTAGTAATGCTAGTTGCTGGTTATCTTGGCGAA---------GTC------------------GGT------GCT---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGCTGGA---TTTATCGTTGGTATGGCTGGTTGGGCTTACATCTTGTATGAAGTT---------------TTT------GCT---GGTGAAGCTGGTAAACTTGCTGCAGAT------AAA---GCTCCTGCATCAGTA---CAA---TCT---GCT---TTC---TCA---TCAATG---AGATGGATTGTATCAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYIILRA---V-GAVSI-GI------------FWR-LMIGTLVMLVAGYLGE---V------G--A-----------I----------------------NA------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKLAAD--K-APASV-Q-S-A-F-S-SM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_DQ422396 [III-Gamma4-OM60] clone_med-50m-d5_DQ422396 gi|90024312|gb|DQ422396| Uncultured bacterium clone med-50m-d5 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-d5 putative proteorhodopsin gene, partial cds. DQ422396 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCCTGACTGTTCCACTGCAGCTCGTCGAATTTTATCTAATACTCGCAGCAGTTGCTGCGGTGTCCGGCGGCATCTTCTGGAGGATCTTTGTCGGGTCTCTAGTGATGTTGGTTCCAGGTTACATGGGCGAGGCTGGTTACTTAAACGCCACCGTCGGATTTGTAATCGGAATGCTCGGATGGGCATTTATCCTCTACGAGATTCATGCGGGCGAAGCGAGTAAAGTCAGCGCGGCTTCCGCTTCCGCTGCTACGCAAAGCTCGTTCACCATGATGAAGTGGGTTGTAACGGTCGGTTGGGCTATTTATCCA RYIDWLLTVPLQLVEFYLILAAVAAVSGGIFWRIFVGSLVMLVPGYMGEAGYLNATVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCCTGACTGTTCCACTGCAGCTCGTCGAATTTTATCTAATACTCGCAGCA---------GTT---GCTGCGGTGTCCGGC---GGCATC------------------------------------TTCTGGAGG---ATCTTTGTCGGGTCTCTAGTGATGTTGGTTCCAGGTTACATGGGCGAG---------GCT------------------GGT------TAC---------------------------------TTA------------------------------------------------------------------AACGCC------------------ACCGTCGGA---TTTGTAATCGGAATGCTCGGATGGGCATTTATCCTCTACGAGATT---------------CAT------GCG---GGCGAAGCGAGTAAAGTCAGCGCGGCT------TCC---GCTTCCGCTGCTACG---CAA---AGC---TCG---TTC---ACC---ATGATG---AAGTGGGTTGTAACGGTC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFVGSLVMLVPGYMGE---A------G--Y-----------L----------------------NA------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_DQ422666 [III-Gamma4-OM60] clone_med-tb04-20m-c8_DQ422666 gi|90024852|gb|DQ422666| Uncultured bacterium clone med-tb04-20m-c8 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-c8 putative proteorhodopsin gene, partial cds. DQ422666 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTCCTGACTGTTCCACTGCAGCTCGTCGAATTTTATCTAATACTCGCAGCAGTTGCTGCGGTGTCCGGCGGCATCTTCTGGAGGATCTTTGTCGGGTCTCTAGTGATGTTGGTTCCAGGTTACATGGGCGAGGCTGGTTACTTAAACGCCACCGTCGGATTTGTAATCGGAATGCTCGGATGGGCATTTATCCTCTACGAGATTCATGCGGGCGAAGCGAGTAAAGTCAGCGCGGCTTCCGCTTCCGCTGCTACGCAAAGCTCGTTCACCATGATGAAGTGGGTTGTAACGGTCGGTTGGGCTATTTATCCA RYIDWLLTVPLQLVEFYLILAAVAAVSGGIFWRIFVGSLVMLVPGYMGEAGYLNATVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCCTGACTGTTCCACTGCAGCTCGTCGAATTTTATCTAATACTCGCAGCA---------GTT---GCTGCGGTGTCCGGC---GGCATC------------------------------------TTCTGGAGG---ATCTTTGTCGGGTCTCTAGTGATGTTGGTTCCAGGTTACATGGGCGAG---------GCT------------------GGT------TAC---------------------------------TTA------------------------------------------------------------------AACGCC------------------ACCGTCGGA---TTTGTAATCGGAATGCTCGGATGGGCATTTATCCTCTACGAGATT---------------CAT------GCG---GGCGAAGCGAGTAAAGTCAGCGCGGCT------TCC---GCTTCCGCTGCTACG---CAA---AGC---TCG---TTC---ACC---ATGATG---AAGTGGGTTGTAACGGTC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFVGSLVMLVPGYMGE---A------G--Y-----------L----------------------NA------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_DQ422181 [III-Gamma4-OM60] clone_med-0m-c6_DQ422181 gi|90023882|gb|DQ422181| Uncultured bacterium clone med-0m-c6 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-c6 putative proteorhodopsin gene, partial cds. DQ422181 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCCTGACTGTTCCACTGCAGCTCGTCGAATTTTATCTAATACTCGCAGCAGTTGCTGCGGTGTCCGGCGGCATCTTCTGGAGGATCTTTGTCGGGTCTCTAGTGATGTTGGTTCCAGGTTACATGGGCGAGGCTGGTTACTTAAACGCCACCGTCGGATTTGTAATCGGAATGCTCGGATGGGCATTTATCCTCTACGAGATTCATGCGGGCGAAGCGAGTAAAGTCAGCGCGGCTTCCGCTTCCGCTGCTACGCAAAGCTCGTTCACCATGATGAAGTGGGTTGTAACGGTCGGTTGGGCTATTTATCCA RYIDWLLTVPLQLVEFYLILAAVAAVSGGIFWRIFVGSLVMLVPGYMGEAGYLNATVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCCTGACTGTTCCACTGCAGCTCGTCGAATTTTATCTAATACTCGCAGCA---------GTT---GCTGCGGTGTCCGGC---GGCATC------------------------------------TTCTGGAGG---ATCTTTGTCGGGTCTCTAGTGATGTTGGTTCCAGGTTACATGGGCGAG---------GCT------------------GGT------TAC---------------------------------TTA------------------------------------------------------------------AACGCC------------------ACCGTCGGA---TTTGTAATCGGAATGCTCGGATGGGCATTTATCCTCTACGAGATT---------------CAT------GCG---GGCGAAGCGAGTAAAGTCAGCGCGGCT------TCC---GCTTCCGCTGCTACG---CAA---AGC---TCG---TTC---ACC---ATGATG---AAGTGGGTTGTAACGGTC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFVGSLVMLVPGYMGE---A------G--Y-----------L----------------------NA------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_DQ422331 [III-Gamma4-OM60] clone_med-20m-g8_DQ422331 gi|90024182|gb|DQ422331| Uncultured bacterium clone med-20m-g8 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-g8 putative proteorhodopsin gene, partial cds. DQ422331 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCCTGACTGTTCCACTGCAGCTCGTCGAATTTTATCTAATACTCGCAGCAGTTGCTGCGGTGTCCGGCGGCATCTTCTGGAGGATCTTTGTCGGGTCTCTAGTGATGTTGGTTCCAGGTTACATGGGCGAGGCTGGTTACTTAAACGCCACCGTCGGATTTGTAATCGGAATGCTCGGATGGGCATTTATCCTCTACGAGATTCATGCGGGCGAAGCGAGTAAAGTCAGCGCGGCTTCCGCTTCCGCTGCTACGCAAAGCTCGTTCACCATGATGAAGTGGGTTGTAACGGTCGGTTGGGCTATTTATCCA RYIDWLLTVPLQLVEFYLILAAVAAVSGGIFWRIFVGSLVMLVPGYMGEAGYLNATVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCCTGACTGTTCCACTGCAGCTCGTCGAATTTTATCTAATACTCGCAGCA---------GTT---GCTGCGGTGTCCGGC---GGCATC------------------------------------TTCTGGAGG---ATCTTTGTCGGGTCTCTAGTGATGTTGGTTCCAGGTTACATGGGCGAG---------GCT------------------GGT------TAC---------------------------------TTA------------------------------------------------------------------AACGCC------------------ACCGTCGGA---TTTGTAATCGGAATGCTCGGATGGGCATTTATCCTCTACGAGATT---------------CAT------GCG---GGCGAAGCGAGTAAAGTCAGCGCGGCT------TCC---GCTTCCGCTGCTACG---CAA---AGC---TCG---TTC---ACC---ATGATG---AAGTGGGTTGTAACGGTC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFVGSLVMLVPGYMGE---A------G--Y-----------L----------------------NA------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_DQ422205 [III-Gamma4-OM60] clone_med-0m-e6_DQ422205 gi|90023930|gb|DQ422205| Uncultured bacterium clone med-0m-e6 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-e6 putative proteorhodopsin gene, partial cds. DQ422205 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCCTGACTGTTCCACTGCAGCTCGTCGAATTTTATCTAATACTCGCAGCAGTTGCTGCGGTGTCCGGCGGCATCTTCTGGAGGATCTTTGTCGGGTCTCTAGTGATGTTGGTTCCAGGTTACATGGGCGAGGCTGGTTACTTAAACGCCACCGTCGGATTTGTAATCGGAATGCTCGGATGGGCATTTATCCTCTACGAGATTCATGCGGGCGAAGCGAGTAAAGTCAGCGCGGCTTCCGCTTCCGCTGCTACGCAAAGCTCGTTCACCATGATGAAGTGGGTTGTAACGGTCGGTTGGGCTATTTACCCA RYIDWLLTVPLQLVEFYLILAAVAAVSGGIFWRIFVGSLVMLVPGYMGEAGYLNATVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCCTGACTGTTCCACTGCAGCTCGTCGAATTTTATCTAATACTCGCAGCA---------GTT---GCTGCGGTGTCCGGC---GGCATC------------------------------------TTCTGGAGG---ATCTTTGTCGGGTCTCTAGTGATGTTGGTTCCAGGTTACATGGGCGAG---------GCT------------------GGT------TAC---------------------------------TTA------------------------------------------------------------------AACGCC------------------ACCGTCGGA---TTTGTAATCGGAATGCTCGGATGGGCATTTATCCTCTACGAGATT---------------CAT------GCG---GGCGAAGCGAGTAAAGTCAGCGCGGCT------TCC---GCTTCCGCTGCTACG---CAA---AGC---TCG---TTC---ACC---ATGATG---AAGTGGGTTGTAACGGTC---------------------------------------------------------------GGTTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFVGSLVMLVPGYMGE---A------G--Y-----------L----------------------NA------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_DQ422333 [III-Gamma4-OM60] clone_med-20m-h1_DQ422333 gi|90024186|gb|DQ422333| Uncultured bacterium clone med-20m-h1 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-h1 putative proteorhodopsin gene, partial cds. DQ422333 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCCTGACTGTTCCACTGCAGCTCGTCGAATTTTATCTAATACTCGCAGCAGTTGCTGCGGTGTCCGGCGGCATCTTCTGGAGGATCTTTGTCGGGTCTCTAGTGATGTTGGTTCCAGGTTACATGGGCGAGGCTGGTTACTTAAACGCCACCGTCGGATTTGTAATCGGAATGCTCGGATGGGCATTTATCCTCTACGAGATTCATGCGGGCGAAGCGAGTAAAGTCAGCGCGGCTTCCGCTTCCGCTGCTACGCAAAGCTCGTTCACCATGATGAAGTGGGTTGTAACGGTCGGTTGGGCTATTTATCCA RYIDWLLTVPLQLVEFYLILAAVAAVSGGIFWRIFVGSLVMLVPGYMGEAGYLNATVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCCTGACTGTTCCACTGCAGCTCGTCGAATTTTATCTAATACTCGCAGCA---------GTT---GCTGCGGTGTCCGGC---GGCATC------------------------------------TTCTGGAGG---ATCTTTGTCGGGTCTCTAGTGATGTTGGTTCCAGGTTACATGGGCGAG---------GCT------------------GGT------TAC---------------------------------TTA------------------------------------------------------------------AACGCC------------------ACCGTCGGA---TTTGTAATCGGAATGCTCGGATGGGCATTTATCCTCTACGAGATT---------------CAT------GCG---GGCGAAGCGAGTAAAGTCAGCGCGGCT------TCC---GCTTCCGCTGCTACG---CAA---AGC---TCG---TTC---ACC---ATGATG---AAGTGGGTTGTAACGGTC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFVGSLVMLVPGYMGE---A------G--Y-----------L----------------------NA------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_DQ422175 [III-Gamma4-OM60] clone_med-0m-c11_DQ422175 gi|90023870|gb|DQ422175| Uncultured bacterium clone med-0m-c11 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-c11 putative proteorhodopsin gene, partial cds. DQ422175 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCCTGACTGTTCCACTGCAGCTCGTCGAATTTTATCTAATACTCGCAGCAGTTGCTGCGGTGTCCGGCGGCATCTTCTGGAGGATCTTTGTCGGGTCTCTAGTGATGTTGGTTCCAGGTTACATGGGCGAGGCTGGTTACTTAAACGCCACCGTCGGATTTGTAATCGGAATGCTCGGATGGGCATTTATCCTCTACGAGATTCATGCGGGCGAAGCGAGTAAAGTCAGCGCGGCTTCCGCTTCCGCTGCTACGCAAAGCTCGTTCACCATGATGAAGTGGGTTGTAACGGTCGGTTGGGCTATTTATCCA RYIDWLLTVPLQLVEFYLILAAVAAVSGGIFWRIFVGSLVMLVPGYMGEAGYLNATVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCCTGACTGTTCCACTGCAGCTCGTCGAATTTTATCTAATACTCGCAGCA---------GTT---GCTGCGGTGTCCGGC---GGCATC------------------------------------TTCTGGAGG---ATCTTTGTCGGGTCTCTAGTGATGTTGGTTCCAGGTTACATGGGCGAG---------GCT------------------GGT------TAC---------------------------------TTA------------------------------------------------------------------AACGCC------------------ACCGTCGGA---TTTGTAATCGGAATGCTCGGATGGGCATTTATCCTCTACGAGATT---------------CAT------GCG---GGCGAAGCGAGTAAAGTCAGCGCGGCT------TCC---GCTTCCGCTGCTACG---CAA---AGC---TCG---TTC---ACC---ATGATG---AAGTGGGTTGTAACGGTC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFVGSLVMLVPGYMGE---A------G--Y-----------L----------------------NA------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_DQ422183 [III-Gamma4-OM60] clone_med-0m-c8_DQ422183 gi|90023886|gb|DQ422183| Uncultured bacterium clone med-0m-c8 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-c8 putative proteorhodopsin gene, partial cds. DQ422183 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCCTGACTGTTCCACTGCAGCTCGTCGAATTTTATCTAATACTCGCGGCAGTTGCTGCGGTGTCCGGCGGCATCTTCTGGAGGATCTTTGTCGGGTCTCTAGTGATGTTGGTTCCAGGTTACATGGGCGAGGCTGGTTACTTAAACGCCACCGTCGGATTTGTAATCGGAATGCTCGGATGGGCATTTATCCTCTACGAGATTCATGCGGGCGAAGCGAGTAAAGTCAGCGCGGCTTCCGCTTCCGCTGCTACGCAAAGCTCGTTCACCATGATGAAGTGGGTTGTAACGGTCGGTTGGGCTATTTATCCA RYIDWLLTVPLQLVEFYLILAAVAAVSGGIFWRIFVGSLVMLVPGYMGEAGYLNATVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCCTGACTGTTCCACTGCAGCTCGTCGAATTTTATCTAATACTCGCGGCA---------GTT---GCTGCGGTGTCCGGC---GGCATC------------------------------------TTCTGGAGG---ATCTTTGTCGGGTCTCTAGTGATGTTGGTTCCAGGTTACATGGGCGAG---------GCT------------------GGT------TAC---------------------------------TTA------------------------------------------------------------------AACGCC------------------ACCGTCGGA---TTTGTAATCGGAATGCTCGGATGGGCATTTATCCTCTACGAGATT---------------CAT------GCG---GGCGAAGCGAGTAAAGTCAGCGCGGCT------TCC---GCTTCCGCTGCTACG---CAA---AGC---TCG---TTC---ACC---ATGATG---AAGTGGGTTGTAACGGTC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFVGSLVMLVPGYMGE---A------G--Y-----------L----------------------NA------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_DQ422362 [III-Gamma4-OM60] clone_med-50m-a7_DQ422362 gi|90024244|gb|DQ422362| Uncultured bacterium clone med-50m-a7 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-a7 putative proteorhodopsin gene, partial cds. DQ422362 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCCTGACTGTTCCACTGCAGCTCGTCGAATTTTATCTAATACTCGCGGCAGTTGCTGCGGTGTCCGGCGGCATCTTCTGGAGGATCTTTGTCGGGTCTCTAGTGATGTTGGTTCCAGGTTACATGGGCGAGGCTGGTTACTTAAACGCCACCGTCGGATTTGTAATCGGAATGCTCGGATGGGCATTTATCCTCTACGAGATTCATGCGGGCGAAGCGAGTAAAGTCAGCGCGGCTTCCGCTTCCGCTGCTACGCAAAGCTCGTTCACCATGATGAAGTGGGTTGTAACGGTCGGGTGGGCTATTTATCCA RYIDWLLTVPLQLVEFYLILAAVAAVSGGIFWRIFVGSLVMLVPGYMGEAGYLNATVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCCTGACTGTTCCACTGCAGCTCGTCGAATTTTATCTAATACTCGCGGCA---------GTT---GCTGCGGTGTCCGGC---GGCATC------------------------------------TTCTGGAGG---ATCTTTGTCGGGTCTCTAGTGATGTTGGTTCCAGGTTACATGGGCGAG---------GCT------------------GGT------TAC---------------------------------TTA------------------------------------------------------------------AACGCC------------------ACCGTCGGA---TTTGTAATCGGAATGCTCGGATGGGCATTTATCCTCTACGAGATT---------------CAT------GCG---GGCGAAGCGAGTAAAGTCAGCGCGGCT------TCC---GCTTCCGCTGCTACG---CAA---AGC---TCG---TTC---ACC---ATGATG---AAGTGGGTTGTAACGGTC---------------------------------------------------------------GGGTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFVGSLVMLVPGYMGE---A------G--Y-----------L----------------------NA------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_DQ422617 [III-Gamma4-OM60] clone_med-tb04-0m-g4_DQ422617 gi|90024754|gb|DQ422617| Uncultured bacterium clone med-tb04-0m-g4 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-g4 putative proteorhodopsin gene, partial cds. DQ422617 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTCCTGACTGTTCCACTGCAGCTCGTCGAATTTTATCTAATACTCGCGGCAGTTGCTGCGGTGTCCGGCGGCATCTTCTGGAGGATCTTTGTCGGGTCTCTAGTGATGTTGGTTCCAGGTTACATGGGCGAGGCTGGTTACTTAAACGCCACCGTCGGATTTGTAATCGGAATGCTCGGATGGGCATTTATCCTCTACGAGATTCATGCGGGCGAAGCGAGTAAAGTCAGCGCGGCTTCCGCTTCCGCTGCTACGCAAAGCTCGTTCACCATGATGAAGTGGGTTGTAACGGTCGGTTGGGCTATTTATCCA RYIDWLLTVPLQLVEFYLILAAVAAVSGGIFWRIFVGSLVMLVPGYMGEAGYLNATVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCCTGACTGTTCCACTGCAGCTCGTCGAATTTTATCTAATACTCGCGGCA---------GTT---GCTGCGGTGTCCGGC---GGCATC------------------------------------TTCTGGAGG---ATCTTTGTCGGGTCTCTAGTGATGTTGGTTCCAGGTTACATGGGCGAG---------GCT------------------GGT------TAC---------------------------------TTA------------------------------------------------------------------AACGCC------------------ACCGTCGGA---TTTGTAATCGGAATGCTCGGATGGGCATTTATCCTCTACGAGATT---------------CAT------GCG---GGCGAAGCGAGTAAAGTCAGCGCGGCT------TCC---GCTTCCGCTGCTACG---CAA---AGC---TCG---TTC---ACC---ATGATG---AAGTGGGTTGTAACGGTC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFVGSLVMLVPGYMGE---A------G--Y-----------L----------------------NA------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_DQ422168 [III-Gamma4-OM60] clone_med-0m-b5_DQ422168 gi|90023856|gb|DQ422168| Uncultured bacterium clone med-0m-b5 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-b5 putative proteorhodopsin gene, partial cds. DQ422168 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCCTGACTGTTCCACTGCAGCTCGTCGAATTTTATCTAATACTCGCGGCAGTTGCTGCGGTGTCCGGCGGCATCTTCTGGAGGATCTTTGTCGGGTCTCTAGTGATGTTGGTTCCAGGTTACATGGGCGAGGCTGGTTACTTAAACGCCACCGTCGGATTTGTAATCGGAATGCTCGGATGGGCATTTATCCTCTACGAGATTCATGCGGGCGAAGCGAGTAAAGTCAGCGCGGCTTCCGCTTCCGCTGCTACGCAAAGCTCGTTCACCATGATGAAGTGGGTTGTAACGGTCGGTTGGGCTATTTATCCA RYIDWLLTVPLQLVEFYLILAAVAAVSGGIFWRIFVGSLVMLVPGYMGEAGYLNATVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCCTGACTGTTCCACTGCAGCTCGTCGAATTTTATCTAATACTCGCGGCA---------GTT---GCTGCGGTGTCCGGC---GGCATC------------------------------------TTCTGGAGG---ATCTTTGTCGGGTCTCTAGTGATGTTGGTTCCAGGTTACATGGGCGAG---------GCT------------------GGT------TAC---------------------------------TTA------------------------------------------------------------------AACGCC------------------ACCGTCGGA---TTTGTAATCGGAATGCTCGGATGGGCATTTATCCTCTACGAGATT---------------CAT------GCG---GGCGAAGCGAGTAAAGTCAGCGCGGCT------TCC---GCTTCCGCTGCTACG---CAA---AGC---TCG---TTC---ACC---ATGATG---AAGTGGGTTGTAACGGTC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFVGSLVMLVPGYMGE---A------G--Y-----------L----------------------NA------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_DQ339367 [III-Gamma4-OM60] clone_S-S4OM-D10_DQ339367 gi|85681705|gb|DQ339367| Uncultured bacterium clone S-S4OM-D10 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-D10 predicted proteorhodopsin gene, partial cds. DQ339367 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCCTGACTGTTCCACTGCAGCTCGTCGAATTTTATCTAATACTCGCGGCAGTTGCTGCGGTGTCCGGCGGCATCTTCTGGAGGATCTTTGTCGGGTCTCTAGTGATGTTGGTTCCAGGTTACATGGGCGAGGCTGGTTACTTAAACGCCACCGTCGGATTTGTAATCGGAATGCTCGGATGGGCATTTATCCTCTACGAGATTCATGCGGGCGAAGCGAGTAAAGTCAGCGCGGCTTCCGCTTCCGCTGCTACGCAAAGCTCGTTCACCATGATGAAGTGGGTTGTAACGGTCGGTTGGGCAATCTATCCA RYIDWLLTVPLQLVEFYLILAAVAAVSGGIFWRIFVGSLVMLVPGYMGEAGYLNATVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCCTGACTGTTCCACTGCAGCTCGTCGAATTTTATCTAATACTCGCGGCA---------GTT---GCTGCGGTGTCCGGC---GGCATC------------------------------------TTCTGGAGG---ATCTTTGTCGGGTCTCTAGTGATGTTGGTTCCAGGTTACATGGGCGAG---------GCT------------------GGT------TAC---------------------------------TTA------------------------------------------------------------------AACGCC------------------ACCGTCGGA---TTTGTAATCGGAATGCTCGGATGGGCATTTATCCTCTACGAGATT---------------CAT------GCG---GGCGAAGCGAGTAAAGTCAGCGCGGCT------TCC---GCTTCCGCTGCTACG---CAA---AGC---TCG---TTC---ACC---ATGATG---AAGTGGGTTGTAACGGTC---------------------------------------------------------------GGTTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFVGSLVMLVPGYMGE---A------G--Y-----------L----------------------NA------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_DQ339399 [III-Gamma4-OM60] clone_S-S4OM-G2_DQ339399 gi|85681769|gb|DQ339399| Uncultured bacterium clone S-S4OM-G2 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-G2 predicted proteorhodopsin gene, partial cds. DQ339399 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCCTGACTGTTCCACTGCAGCTCGTCGAATTTTATCTAATACTCGCGGCAGTTGCTGCGGTGTCCGGCGGCATCTTCTGGAGGATCTTTGTCGGGTCTCTAGTGATGTTGGTTCCAGGTTACATGGGCGAGGCTGGTTACTTAAACGCCACCGTCGGATTTGTAATCGGAATGCTCGGATGGGCATTTATCCTCTACGAGATTCATGCGGGCGAAGCGAGTAAAGTCAGCGCGGCTTCCGCTTCCGCTGCTACGCAAAGCTCGTTCACCATGATGAAGTGGGTTGTAACGGTCGGGTGGGCCATCTATCCA RYIDWLLTVPLQLVEFYLILAAVAAVSGGIFWRIFVGSLVMLVPGYMGEAGYLNATVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCCTGACTGTTCCACTGCAGCTCGTCGAATTTTATCTAATACTCGCGGCA---------GTT---GCTGCGGTGTCCGGC---GGCATC------------------------------------TTCTGGAGG---ATCTTTGTCGGGTCTCTAGTGATGTTGGTTCCAGGTTACATGGGCGAG---------GCT------------------GGT------TAC---------------------------------TTA------------------------------------------------------------------AACGCC------------------ACCGTCGGA---TTTGTAATCGGAATGCTCGGATGGGCATTTATCCTCTACGAGATT---------------CAT------GCG---GGCGAAGCGAGTAAAGTCAGCGCGGCT------TCC---GCTTCCGCTGCTACG---CAA---AGC---TCG---TTC---ACC---ATGATG---AAGTGGGTTGTAACGGTC---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFVGSLVMLVPGYMGE---A------G--Y-----------L----------------------NA------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_DQ339379 [III-Gamma4-OM60] clone_S-S4OM-E12_DQ339379 gi|85681729|gb|DQ339379| Uncultured bacterium clone S-S4OM-E12 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-E12 predicted proteorhodopsin gene, partial cds. DQ339379 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCCTGACTGTTCCACTGCAGCTCGTCGAATTTTATCTAATACTCGCGGCAGTTGCTGCGGTGCCCGGCGGCATCTTCTGGAGGATCTTTGTCGGGTCTCTAGTGATGTTGGTTCCAGGTTACATGGGCGAGGCTGGTTACTTAAACGCCACCGTCGGATTTGTAATCGGAATGCTCGGATGGGCATTTATCCTCTACGAGATTCATGCGGGCGAAGCGAGTAAAGTCAGCGCGGCTTCCGCTTCCGCTGCTACGCAAAGCTCGTTCACCATGATGAAGTGGGTTGTAACGGTCGGGTGGGCCATTTATCCA RYIDWLLTVPLQLVEFYLILAAVAAVPGGIFWRIFVGSLVMLVPGYMGEAGYLNATVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCCTGACTGTTCCACTGCAGCTCGTCGAATTTTATCTAATACTCGCGGCA---------GTT---GCTGCGGTGCCCGGC---GGCATC------------------------------------TTCTGGAGG---ATCTTTGTCGGGTCTCTAGTGATGTTGGTTCCAGGTTACATGGGCGAG---------GCT------------------GGT------TAC---------------------------------TTA------------------------------------------------------------------AACGCC------------------ACCGTCGGA---TTTGTAATCGGAATGCTCGGATGGGCATTTATCCTCTACGAGATT---------------CAT------GCG---GGCGAAGCGAGTAAAGTCAGCGCGGCT------TCC---GCTTCCGCTGCTACG---CAA---AGC---TCG---TTC---ACC---ATGATG---AAGTGGGTTGTAACGGTC---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQLVEFYLILAA---V-AAVPG-GI------------FWR-IFVGSLVMLVPGYMGE---A------G--Y-----------L----------------------NA------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_DQ339363 [III-Gamma4-OM60] clone_S-S4OM-C7_DQ339363 gi|85681697|gb|DQ339363| Uncultured bacterium clone S-S4OM-C7 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-C7 predicted proteorhodopsin gene, partial cds. DQ339363 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGCTATATAGACTGGCTCCTGACTGTTCCACTGCAGCTCGTCGAATTTTATCTAATACTCGCGGCAGTTGCTGCGGTGTCCGGCGGCATCTTCTGGAGGATCTTTGTCGGGTCTCTAGTGATGTTGGTTCCAGGTTACATGGGCGAGGCTGGTTACTTAAACGCCACCGTCGGATTTGTAATCGGAATGCTCGGATGGGCATTTATCCTCTACGAGATTCATGCGGGCGAAGCGAGTAAAGTCAGCGCGGCTTCCGCTTCCGCTGCTACGCAAAGCTCGTTCACCATGATGAAGTGGGTTGTAACGGTCGGTTGGGCGATTTATCCA SYIDWLLTVPLQLVEFYLILAAVAAVSGGIFWRIFVGSLVMLVPGYMGEAGYLNATVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATAGACTGG------------------------CTCCTGACTGTTCCACTGCAGCTCGTCGAATTTTATCTAATACTCGCGGCA---------GTT---GCTGCGGTGTCCGGC---GGCATC------------------------------------TTCTGGAGG---ATCTTTGTCGGGTCTCTAGTGATGTTGGTTCCAGGTTACATGGGCGAG---------GCT------------------GGT------TAC---------------------------------TTA------------------------------------------------------------------AACGCC------------------ACCGTCGGA---TTTGTAATCGGAATGCTCGGATGGGCATTTATCCTCTACGAGATT---------------CAT------GCG---GGCGAAGCGAGTAAAGTCAGCGCGGCT------TCC---GCTTCCGCTGCTACG---CAA---AGC---TCG---TTC---ACC---ATGATG---AAGTGGGTTGTAACGGTC---------------------------------------------------------------GGTTGG---------GCGATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFVGSLVMLVPGYMGE---A------G--Y-----------L----------------------NA------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_DQ422151 [III-Gamma4-OM60] clone_med-0m-a10_DQ422151 gi|90023822|gb|DQ422151| Uncultured bacterium clone med-0m-a10 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-a10 putative proteorhodopsin gene, partial cds. DQ422151 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCCTGACTGTTCCACTGCAGCTCGTCGAATTTTATCTAATACTCGCGGCAGTTGCTGCGGTGTCCGGCGGCATCTTCTGGAGGATCTTTGTCGGGTCTCTAGTGATGTTGGTTCCAGGTTACATGGGCGAGGCTGGTTACTTAAACGCCACCGTCGGATTTGTAATCGGAATGCTCGGATGGGCATTTATCCTCTACGAGATTCATGCGGGCGAAGCGAGTAAAGTCAGCGCGGCTTCCGCTTCCGCTGCTACGCAAAGCTCGTTCACCATGATGAAGTGGGTTGTAACGGTCGGTTGGGCTATTTATCCA RYIDWLLTVPLQLVEFYLILAAVAAVSGGIFWRIFVGSLVMLVPGYMGEAGYLNATVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCCTGACTGTTCCACTGCAGCTCGTCGAATTTTATCTAATACTCGCGGCA---------GTT---GCTGCGGTGTCCGGC---GGCATC------------------------------------TTCTGGAGG---ATCTTTGTCGGGTCTCTAGTGATGTTGGTTCCAGGTTACATGGGCGAG---------GCT------------------GGT------TAC---------------------------------TTA------------------------------------------------------------------AACGCC------------------ACCGTCGGA---TTTGTAATCGGAATGCTCGGATGGGCATTTATCCTCTACGAGATT---------------CAT------GCG---GGCGAAGCGAGTAAAGTCAGCGCGGCT------TCC---GCTTCCGCTGCTACG---CAA---AGC---TCG---TTC---ACC---ATGATG---AAGTGGGTTGTAACGGTC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFVGSLVMLVPGYMGE---A------G--Y-----------L----------------------NA------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_DQ422540 [III-Gamma4-OM60] clone_med-tb04-50m-h9_DQ422540 gi|90024600|gb|DQ422540| Uncultured bacterium clone med-tb04-50m-h9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-h9 putative proteorhodopsin gene, partial cds. DQ422540 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTCCTGACTGTTCCACTGCAGCTCGTCGAATTTTATCTAATACTCGCGGCAGTTGCTGCGGTGTCCGGCGGCATCTTCTGGAGGATCTTTGTCGGGTCTCTAGTGATGTTGGTTCCAGGTTACATGGGCGAGGCTGGTTACTTAAACGCCACCGTCGGATTTGTAATCGGAATGCTCGGATGGGCATTTATCCTCTACGAGATTCATGCGGGCGAAGCGAGTAAAGTCAGCGCGGCTTCCGCTTCCGCTGCTACGCAAAGCTCGTTCACCATGATGAAGTGGGTTGTAACGGTCGGTTGGGCTATTTATCCA RYIDWLLTVPLQLVEFYLILAAVAAVSGGIFWRIFVGSLVMLVPGYMGEAGYLNATVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCCTGACTGTTCCACTGCAGCTCGTCGAATTTTATCTAATACTCGCGGCA---------GTT---GCTGCGGTGTCCGGC---GGCATC------------------------------------TTCTGGAGG---ATCTTTGTCGGGTCTCTAGTGATGTTGGTTCCAGGTTACATGGGCGAG---------GCT------------------GGT------TAC---------------------------------TTA------------------------------------------------------------------AACGCC------------------ACCGTCGGA---TTTGTAATCGGAATGCTCGGATGGGCATTTATCCTCTACGAGATT---------------CAT------GCG---GGCGAAGCGAGTAAAGTCAGCGCGGCT------TCC---GCTTCCGCTGCTACG---CAA---AGC---TCG---TTC---ACC---ATGATG---AAGTGGGTTGTAACGGTC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFVGSLVMLVPGYMGE---A------G--Y-----------L----------------------NA------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_DQ422230 [III-Gamma4-OM60] clone_med-0m-g9_DQ422230 gi|90023980|gb|DQ422230| Uncultured bacterium clone med-0m-g9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-g9 putative proteorhodopsin gene, partial cds. DQ422230 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCCTGACTGTTCCACTGCAGCTCGTCGAATTTTATCTAATACTCGCAGCAGTTGCTGCGGTGTCCGGCGGCATCTTCTGGAGGATCTTTGTCGGGTCTCTAGTGATGTTGGTTCCAGGTTACATGGGCGAGGCTGGTTACTTAAACGCCACCGTCGGATTTGTAATCGGAATGCTCGGATGGGCATTTATCCTCTACGAGATTCATGCGGGCGAAGCGAGTAAAGTCAGCGCGGCTTCCGCTTCCGCTGCTACGCAAAGCTCGTTCACCATGATGAAGTGGGTTGTAACGGTCGGTTGGGCTATTTATCCA RYIDWLLTVPLQLVEFYLILAAVAAVSGGIFWRIFVGSLVMLVPGYMGEAGYLNATVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCCTGACTGTTCCACTGCAGCTCGTCGAATTTTATCTAATACTCGCAGCA---------GTT---GCTGCGGTGTCCGGC---GGCATC------------------------------------TTCTGGAGG---ATCTTTGTCGGGTCTCTAGTGATGTTGGTTCCAGGTTACATGGGCGAG---------GCT------------------GGT------TAC---------------------------------TTA------------------------------------------------------------------AACGCC------------------ACCGTCGGA---TTTGTAATCGGAATGCTCGGATGGGCATTTATCCTCTACGAGATT---------------CAT------GCG---GGCGAAGCGAGTAAAGTCAGCGCGGCT------TCC---GCTTCCGCTGCTACG---CAA---AGC---TCG---TTC---ACC---ATGATG---AAGTGGGTTGTAACGGTC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFVGSLVMLVPGYMGE---A------G--Y-----------L----------------------NA------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_DQ422223 [III-Gamma4-OM60] clone_med-0m-g2_DQ422223 gi|90023966|gb|DQ422223| Uncultured bacterium clone med-0m-g2 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-g2 putative proteorhodopsin gene, partial cds. DQ422223 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCCTGACTGTTCCACTGCAGCTCGTCGAATTTTATCTAATACTCGCAGCAGTTGCTGCGGTGTCCGGCGGCATCTTCTGGAGGATCTTTGTCGGGTCTCTAGTGATGTTGGTTCCAGGTTACATGGGCGAGGCTGGTTACTTAAACGCCACCGTCGGATTTGTAATCGGAATGCTCGGATGGGCATTTATCCTCTACGAGATTCATGCGGGCGAAGCGAGTAAAGTCAGCGCGGCTTCCGCTTCCGCTGCTACGCAAAGCTCGTTCACCATGATGAAGTGGGTTGTAACGGTCGGGTGGGCTATTTATCCA RYIDWLLTVPLQLVEFYLILAAVAAVSGGIFWRIFVGSLVMLVPGYMGEAGYLNATVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCCTGACTGTTCCACTGCAGCTCGTCGAATTTTATCTAATACTCGCAGCA---------GTT---GCTGCGGTGTCCGGC---GGCATC------------------------------------TTCTGGAGG---ATCTTTGTCGGGTCTCTAGTGATGTTGGTTCCAGGTTACATGGGCGAG---------GCT------------------GGT------TAC---------------------------------TTA------------------------------------------------------------------AACGCC------------------ACCGTCGGA---TTTGTAATCGGAATGCTCGGATGGGCATTTATCCTCTACGAGATT---------------CAT------GCG---GGCGAAGCGAGTAAAGTCAGCGCGGCT------TCC---GCTTCCGCTGCTACG---CAA---AGC---TCG---TTC---ACC---ATGATG---AAGTGGGTTGTAACGGTC---------------------------------------------------------------GGGTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFVGSLVMLVPGYMGE---A------G--Y-----------L----------------------NA------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_DQ422258 [III-Gamma4-OM60] clone_med-20m-a6_DQ422258 gi|90024036|gb|DQ422258| Uncultured bacterium clone med-20m-a6 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-a6 putative proteorhodopsin gene, partial cds. DQ422258 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCCTGACTGTTCCACTGCAGCTCGTCGAATTTTATCTAATACTCGCAGCAGTTGCTGCGGTGTCCGGCGGCATCTTCTGGAGGATCTTTGTCGGGTCTCTAGTGATGTTGGTTCCAGGTTACATGGGCGAGGCTGGTTACTTAAACGCCACCGTCGGATTTGTAATCGGAATGCTCGGATGGGCATTTATCCTCTACGAGATTCATGCGGGCGAAGCGAGTAAAGTCAGCGCGGCTTCCGCTTCCGCTGCTACGCAAAGCTCGTTCACCATGATGAAGTGGGTTGTAACGGTCGGTTGGGCTATTTATCCA RYIDWLLTVPLQLVEFYLILAAVAAVSGGIFWRIFVGSLVMLVPGYMGEAGYLNATVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCCTGACTGTTCCACTGCAGCTCGTCGAATTTTATCTAATACTCGCAGCA---------GTT---GCTGCGGTGTCCGGC---GGCATC------------------------------------TTCTGGAGG---ATCTTTGTCGGGTCTCTAGTGATGTTGGTTCCAGGTTACATGGGCGAG---------GCT------------------GGT------TAC---------------------------------TTA------------------------------------------------------------------AACGCC------------------ACCGTCGGA---TTTGTAATCGGAATGCTCGGATGGGCATTTATCCTCTACGAGATT---------------CAT------GCG---GGCGAAGCGAGTAAAGTCAGCGCGGCT------TCC---GCTTCCGCTGCTACG---CAA---AGC---TCG---TTC---ACC---ATGATG---AAGTGGGTTGTAACGGTC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFVGSLVMLVPGYMGE---A------G--Y-----------L----------------------NA------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_DQ422327 [III-Gamma4-OM60] clone_med-20m-g4_DQ422327 gi|90024174|gb|DQ422327| Uncultured bacterium clone med-20m-g4 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-g4 putative proteorhodopsin gene, partial cds. DQ422327 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCTTGACGGTTCCACTGCAGCTAGTCGAGTTTTATCTAATACTCGCAGCAGTTGCCGCGGTGTCCGGTGGCATCTTCTGGAGGATCTTCATAGGGTCTCTAGTAATGTTGATCCCAGGTTACATGGGCGAGGCCGGTTACTTGAACGCCACAGTTGGTTTTGTAATCGGAATACTCGGATGGGCATTTATCCTCTACGAGATTCATGCGGGCGAAGCGAGTAAAGTCAGCGCTGCTTCTGCTTCCGCTGCTACACAAAGCTCATTCACCATGATGAAGTGGGTTGTAACGGTCGGTTGGGCTATTTATCCA RYIDWLLTVPLQLVEFYLILAAVAAVSGGIFWRIFIGSLVMLIPGYMGEAGYLNATVGFVIGILGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCTTGACGGTTCCACTGCAGCTAGTCGAGTTTTATCTAATACTCGCAGCA---------GTT---GCCGCGGTGTCCGGT---GGCATC------------------------------------TTCTGGAGG---ATCTTCATAGGGTCTCTAGTAATGTTGATCCCAGGTTACATGGGCGAG---------GCC------------------GGT------TAC---------------------------------TTG------------------------------------------------------------------AACGCC------------------ACAGTTGGT---TTTGTAATCGGAATACTCGGATGGGCATTTATCCTCTACGAGATT---------------CAT------GCG---GGCGAAGCGAGTAAAGTCAGCGCTGCT------TCT---GCTTCCGCTGCTACA---CAA---AGC---TCA---TTC---ACC---ATGATG---AAGTGGGTTGTAACGGTC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFIGSLVMLIPGYMGE---A------G--Y-----------L----------------------NA------TVG-FVIGILGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_DQ422586 [III-Gamma4-OM60] clone_med-tb04-0m-d9_DQ422586 gi|90024692|gb|DQ422586| Uncultured bacterium clone med-tb04-0m-d9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-d9 putative proteorhodopsin gene, partial cds. DQ422586 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTCTTGACGGTTCCACTGCAGCTAGTCGAGTTTTATCTAATACTCGCAGCAGTTGCCGCGGTGTCCGGTGGCATCTTCTGGAGGATCTTCATAGGGTCTCTAGTAATGTTGATCCCAGGTTACATGGGCGAGGCCGGTTACTTGAACGCCACAGTTGGTTTTGTAATCGGAATACTCGGATGGGCATTTATCCTTTACGAGATTCATGCGGGCGAAGCGAGTAAAGTCAGCGCTGCTTCTGCTTCCGCTGCTACACAAAGCTCATTCACCATGATGAAGTGGGTTGTAACGGTCGGTTGGGCTATTTATCCA RYIDWLLTVPLQLVEFYLILAAVAAVSGGIFWRIFIGSLVMLIPGYMGEAGYLNATVGFVIGILGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCTTGACGGTTCCACTGCAGCTAGTCGAGTTTTATCTAATACTCGCAGCA---------GTT---GCCGCGGTGTCCGGT---GGCATC------------------------------------TTCTGGAGG---ATCTTCATAGGGTCTCTAGTAATGTTGATCCCAGGTTACATGGGCGAG---------GCC------------------GGT------TAC---------------------------------TTG------------------------------------------------------------------AACGCC------------------ACAGTTGGT---TTTGTAATCGGAATACTCGGATGGGCATTTATCCTTTACGAGATT---------------CAT------GCG---GGCGAAGCGAGTAAAGTCAGCGCTGCT------TCT---GCTTCCGCTGCTACA---CAA---AGC---TCA---TTC---ACC---ATGATG---AAGTGGGTTGTAACGGTC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFIGSLVMLIPGYMGE---A------G--Y-----------L----------------------NA------TVG-FVIGILGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_JX863219 [III-Gamma4-OM60] MALINA_OTU71_479_L_env_samples_JX863219 gi|425477388|gb|JX863219| Uncultured bacterium clone MALINA OTU71 479 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU71 479 L putative proteorhodopsin gene, partial cds JX863219 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 13Aug2009 0m_depth Arctic Ocean marine 69.25 -137.2 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTTCTAACTGTTCCTTTATTAATGGTCGAGTTTTATCTTATATTATCCGCAATTACTAAAGTTTCCGGTGGTATATTCTGGAGATTGCTAATTGGTACCCTGGTAATGCTGATACCCGGCTACATGGGTGAGGCTGGATACCTAAATGCCACCATTGGTTTTGTAATAGGTATGGCAGGTTGGGCATACATCTTATTTGAAATCTTTGCAGGTGAAGCTAGCCGAGTTGCTGCAAGCCAAGCTACTCAAGCGGTACAAAAGTCATACAACTTGATGAAGTGGACAGTAACCATA WLLTVPLLMVEFYLILSAITKVSGGIFWRLLIGTLVMLIPGYMGEAGYLNATIGFVIGMAGWAYILFEIFAGEASRVAASQATQAVQKSYNLMKWTVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTTCTAACTGTTCCTTTATTAATGGTCGAGTTTTATCTTATATTATCCGCA---------ATT---ACTAAAGTTTCCGGT---GGTATA------------------------------------TTCTGGAGA---TTGCTAATTGGTACCCTGGTAATGCTGATACCCGGCTACATGGGTGAG---------GCT------------------GGA------TAC---------------------------------CTA------------------------------------------------------------------AATGCC------------------ACCATTGGT---TTTGTAATAGGTATGGCAGGTTGGGCATACATCTTATTTGAAATC---------------TTT------GCA---GGTGAAGCTAGCCGAGTTGCTGCAAGC------CAA---GCTACTCAAGCGGTA---CAA---AAG---TCA---TAC---AAC---TTGATG---AAGTGGACAGTAACCATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLMVEFYLILSA---I-TKVSG-GI------------FWR-LLIGTLVMLIPGYMGE---A------G--Y-----------L----------------------NA------TIG-FVIGMAGWAYILFEI-----F--A-GEASRVAAS--Q-ATQAV-Q-K-S-Y-N-LM-KWTVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_DQ422176 [III-Gamma4-OM60] clone_med-0m-c12_DQ422176 gi|90023872|gb|DQ422176| Uncultured bacterium clone med-0m-c12 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-c12 putative proteorhodopsin gene, partial cds. DQ422176 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCCTGACGGTTCCATTATTGATGATCGAGTTCTACTTAATCCTTGCAGCGATCACTAAAGTGTCTGGGGGTATCTTCTGGAGACTTTTAGTCGGTACTCTAGTTATGCTCGTTCCTGGTTATATGGGCGAAGCGGGTTACATGGACGTGACCGTCGGTTTTGTTATCGGGCTGATCGGCTGGGCTTACATTCTCTATGAGATCTTCGCGGGTGAGGCGAGTAAAGTTGCTGCAGCTCAGGCATCTGCTGCTGTTAAAAAGGCTTATGCTTTAATGAAGTGGACAGTCACGCTTGGTTGGGCCATTTATCCA RYIDWLLTVPLLMIEFYLILAAITKVSGGIFWRLLVGTLVMLVPGYMGEAGYMDVTVGFVIGLIGWAYILYEIFAGEASKVAAAQASAAVKKAYALMKWTVTLGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCCTGACGGTTCCATTATTGATGATCGAGTTCTACTTAATCCTTGCAGCG---------ATC---ACTAAAGTGTCTGGG---GGTATC------------------------------------TTCTGGAGA---CTTTTAGTCGGTACTCTAGTTATGCTCGTTCCTGGTTATATGGGCGAA---------GCG------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GACGTG------------------ACCGTCGGT---TTTGTTATCGGGCTGATCGGCTGGGCTTACATTCTCTATGAGATC---------------TTC------GCG---GGTGAGGCGAGTAAAGTTGCTGCAGCT------CAG---GCATCTGCTGCTGTT---AAA---AAG---GCT---TAT---GCT---TTAATG---AAGTGGACAGTCACGCTT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYLILAA---I-TKVSG-GI------------FWR-LLVGTLVMLVPGYMGE---A------G--Y-----------M----------------------DV------TVG-FVIGLIGWAYILYEI-----F--A-GEASKVAAA--Q-ASAAV-K-K-A-Y-A-LM-KWTVTL---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_DQ422302 [III-Gamma4-OM60] clone_med-20m-e3_DQ422302 gi|90024124|gb|DQ422302| Uncultured bacterium clone med-20m-e3 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-e3 putative proteorhodopsin gene, partial cds. DQ422302 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCCTGACGGTTCCATTATTGATGATCGAGTTCTACTTAATCCTTGCAGCGATCACTAAAGTGTCTGGGGGTATCTTCTGGAGACTTTTAGTCGGTACTCTAGTTATGCTCGTTCCTGGTTATATGGGCGAAGCGGGTTACATGGACGTGACCGTCGGTTTTGTTATCGGGCTGATCGGCTGGGCTTACATTCTCTATGAGATCTTCGCGGGTGAGGCGAGTAAAGTTGCTGCAGCTCAGGCATCTGCTGCTGTTAAAAAGGCTTATGCTTTAATGAAGTGGACAGTCACGCTTGGTTGGGCTATTTATCCA RYIDWLLTVPLLMIEFYLILAAITKVSGGIFWRLLVGTLVMLVPGYMGEAGYMDVTVGFVIGLIGWAYILYEIFAGEASKVAAAQASAAVKKAYALMKWTVTLGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCCTGACGGTTCCATTATTGATGATCGAGTTCTACTTAATCCTTGCAGCG---------ATC---ACTAAAGTGTCTGGG---GGTATC------------------------------------TTCTGGAGA---CTTTTAGTCGGTACTCTAGTTATGCTCGTTCCTGGTTATATGGGCGAA---------GCG------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GACGTG------------------ACCGTCGGT---TTTGTTATCGGGCTGATCGGCTGGGCTTACATTCTCTATGAGATC---------------TTC------GCG---GGTGAGGCGAGTAAAGTTGCTGCAGCT------CAG---GCATCTGCTGCTGTT---AAA---AAG---GCT---TAT---GCT---TTAATG---AAGTGGACAGTCACGCTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYLILAA---I-TKVSG-GI------------FWR-LLVGTLVMLVPGYMGE---A------G--Y-----------M----------------------DV------TVG-FVIGLIGWAYILYEI-----F--A-GEASKVAAA--Q-ASAAV-K-K-A-Y-A-LM-KWTVTL---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_DQ422442 [III-Gamma4-OM60] clone_med-50m-h4_DQ422442 gi|90024404|gb|DQ422442| Uncultured bacterium clone med-50m-h4 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-h4 putative proteorhodopsin gene, partial cds. DQ422442 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCCTGACGGTTCCATTATTGATGATCGAGTTCTACTTAATCCTTGCAGCGATCACTAAAGTGTCTGGGGGTATCTTCTGGAGACTTTTAGTCGGTACTCTAGTTATGCTCGTTCCTGGTTATATGGGCGAAGCGGGTTACATGGACGTGACCGTCGGTTTTGTTATCGGGCTGATCGGCTGGGCTTACATTCTCTATGAGATCTTCGCGGGTGAGGCGAGTAAAGTTGCTGCAGCTCAGGCATCTGCTGCTGTTAAAAAGGCTTATGCTTTAATGAAGTGGACAGTCACGCTTGGTTGGGCTATTTATCCA RYIDWLLTVPLLMIEFYLILAAITKVSGGIFWRLLVGTLVMLVPGYMGEAGYMDVTVGFVIGLIGWAYILYEIFAGEASKVAAAQASAAVKKAYALMKWTVTLGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCCTGACGGTTCCATTATTGATGATCGAGTTCTACTTAATCCTTGCAGCG---------ATC---ACTAAAGTGTCTGGG---GGTATC------------------------------------TTCTGGAGA---CTTTTAGTCGGTACTCTAGTTATGCTCGTTCCTGGTTATATGGGCGAA---------GCG------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GACGTG------------------ACCGTCGGT---TTTGTTATCGGGCTGATCGGCTGGGCTTACATTCTCTATGAGATC---------------TTC------GCG---GGTGAGGCGAGTAAAGTTGCTGCAGCT------CAG---GCATCTGCTGCTGTT---AAA---AAG---GCT---TAT---GCT---TTAATG---AAGTGGACAGTCACGCTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYLILAA---I-TKVSG-GI------------FWR-LLVGTLVMLVPGYMGE---A------G--Y-----------M----------------------DV------TVG-FVIGLIGWAYILYEI-----F--A-GEASKVAAA--Q-ASAAV-K-K-A-Y-A-LM-KWTVTL---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_DQ422222 [III-Gamma4-OM60] clone_med-0m-g12_DQ422222 gi|90023964|gb|DQ422222| Uncultured bacterium clone med-0m-g12 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-g12 putative proteorhodopsin gene, partial cds. DQ422222 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCCTGACGGTTCCATTATTGATGATCGAGTTCTACTTAATCCTTGCAGCGATCACTAAAGTGTCTGGGGGTATCTTCTGGAGACTTTTAGTCGGTACTCTAGTTATGCTCGTTCCTGGTTATATGGGCGAAGCGGGTTACATGGACGTGACCGTCGGTTTTGTTATCGGGCTGATCGGCTGGGCTTACATTCTCTATGAGATCTTCGCGGGTGAGGCGAGTAAAGTTGCTGCAGCTCAGGCATCTGCTGCTGTTAAAAAGGCTTATGCTTTAATGAAGTGGACAGTCACGCTTGGTTGGGCTATTTATCCA RYIDWLLTVPLLMIEFYLILAAITKVSGGIFWRLLVGTLVMLVPGYMGEAGYMDVTVGFVIGLIGWAYILYEIFAGEASKVAAAQASAAVKKAYALMKWTVTLGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCCTGACGGTTCCATTATTGATGATCGAGTTCTACTTAATCCTTGCAGCG---------ATC---ACTAAAGTGTCTGGG---GGTATC------------------------------------TTCTGGAGA---CTTTTAGTCGGTACTCTAGTTATGCTCGTTCCTGGTTATATGGGCGAA---------GCG------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GACGTG------------------ACCGTCGGT---TTTGTTATCGGGCTGATCGGCTGGGCTTACATTCTCTATGAGATC---------------TTC------GCG---GGTGAGGCGAGTAAAGTTGCTGCAGCT------CAG---GCATCTGCTGCTGTT---AAA---AAG---GCT---TAT---GCT---TTAATG---AAGTGGACAGTCACGCTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYLILAA---I-TKVSG-GI------------FWR-LLVGTLVMLVPGYMGE---A------G--Y-----------M----------------------DV------TVG-FVIGLIGWAYILYEI-----F--A-GEASKVAAA--Q-ASAAV-K-K-A-Y-A-LM-KWTVTL---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_DQ422386 [III-Gamma4-OM60] clone_med-50m-c7_DQ422386 gi|90024292|gb|DQ422386| Uncultured bacterium clone med-50m-c7 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-c7 putative proteorhodopsin gene, partial cds. DQ422386 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCCTGACGGTTCCATTATTGATGATCGAGTTCTACTTAATCCTTGCAGCGATCACTAAAGTGTCTGGGGGTATCTTCTGGAGACTTTTAGTCGGTACTCTAGTTATGCTCGTTCCTGGTTATATGGGCGAAGCGGGTTACATGGACGTGACCGTCGGTTTTGTTATCGGGCTGATCGGCTGGGCTTACATTCTCTATGAGATCTTCGCGGGTGAGGCGAGTAAAGTTGCTGCAGCTCAGGCATCTGCTGCTGTTAAAAAGGCTTATGCTTTAATGAAGTGGACAGTCACGCTTGGTTGGGCTATTTATCCA RYIDWLLTVPLLMIEFYLILAAITKVSGGIFWRLLVGTLVMLVPGYMGEAGYMDVTVGFVIGLIGWAYILYEIFAGEASKVAAAQASAAVKKAYALMKWTVTLGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCCTGACGGTTCCATTATTGATGATCGAGTTCTACTTAATCCTTGCAGCG---------ATC---ACTAAAGTGTCTGGG---GGTATC------------------------------------TTCTGGAGA---CTTTTAGTCGGTACTCTAGTTATGCTCGTTCCTGGTTATATGGGCGAA---------GCG------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GACGTG------------------ACCGTCGGT---TTTGTTATCGGGCTGATCGGCTGGGCTTACATTCTCTATGAGATC---------------TTC------GCG---GGTGAGGCGAGTAAAGTTGCTGCAGCT------CAG---GCATCTGCTGCTGTT---AAA---AAG---GCT---TAT---GCT---TTAATG---AAGTGGACAGTCACGCTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYLILAA---I-TKVSG-GI------------FWR-LLVGTLVMLVPGYMGE---A------G--Y-----------M----------------------DV------TVG-FVIGLIGWAYILYEI-----F--A-GEASKVAAA--Q-ASAAV-K-K-A-Y-A-LM-KWTVTL---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_DQ422326 [III-Gamma4-OM60] clone_med-20m-g3_DQ422326 gi|90024172|gb|DQ422326| Uncultured bacterium clone med-20m-g3 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-g3 putative proteorhodopsin gene, partial cds. DQ422326 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCCTGACGGTTCCATTATTGATGATCGAGTTCTACTTAATCCTTGCAGCGATCACTAAAGTGTCTGGGGGTATCTTCTGGAGACTTTTAGTCGGTACTCTAGTTATGCTCGTTCCTGGTTATATGGGCGAAGCGGGTTACATGGACGTGACCGTCGGTTTTGTTATCGGGCTGATCGGCTGGGCTTACATTCTCTATGAGATCTTCGCGGGTGAGGCGAGTAAAGTTGCTGCAGCTCAGGCATCTGCTGCTGTTAAAAAGGCTTATGCTTTAATGAAGTGGACAGTCACGCTTGGTTGGGCTATTTATCCA RYIDWLLTVPLLMIEFYLILAAITKVSGGIFWRLLVGTLVMLVPGYMGEAGYMDVTVGFVIGLIGWAYILYEIFAGEASKVAAAQASAAVKKAYALMKWTVTLGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCCTGACGGTTCCATTATTGATGATCGAGTTCTACTTAATCCTTGCAGCG---------ATC---ACTAAAGTGTCTGGG---GGTATC------------------------------------TTCTGGAGA---CTTTTAGTCGGTACTCTAGTTATGCTCGTTCCTGGTTATATGGGCGAA---------GCG------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GACGTG------------------ACCGTCGGT---TTTGTTATCGGGCTGATCGGCTGGGCTTACATTCTCTATGAGATC---------------TTC------GCG---GGTGAGGCGAGTAAAGTTGCTGCAGCT------CAG---GCATCTGCTGCTGTT---AAA---AAG---GCT---TAT---GCT---TTAATG---AAGTGGACAGTCACGCTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYLILAA---I-TKVSG-GI------------FWR-LLVGTLVMLVPGYMGE---A------G--Y-----------M----------------------DV------TVG-FVIGLIGWAYILYEI-----F--A-GEASKVAAA--Q-ASAAV-K-K-A-Y-A-LM-KWTVTL---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_DQ422283 [III-Gamma4-OM60] clone_med-20m-c7_DQ422283 gi|90024086|gb|DQ422283| Uncultured bacterium clone med-20m-c7 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-c7 putative proteorhodopsin gene, partial cds. DQ422283 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGCTACATAGACTGGCTCCTGACGGTTCCATTATTGATGATCGAGTTCTACTTAATCCTTGCAGCGATCACTAAAGTGTCTGGGGGTATCTTCTGGAGACTTTTAGTCGGTACTCTAGTTATGCTCGTTCCTGGTTATATGGGCGAAGCGGGTTACATGGACGTGACCGTCGGTTTTGTTATCGGGCTGATCGGCTGGGCTTACATTCTCTATGAGATCTTCGCGGGTGAGGCGAGTAAAGTTGCTGCAGCTCAGGCATCTGCTGCTGTTAAAAAGGCTTATGCTTTAATGAAGTGGACAGTCACGCTTGGTTGGGCTATTTATCCA SYIDWLLTVPLLMIEFYLILAAITKVSGGIFWRLLVGTLVMLVPGYMGEAGYMDVTVGFVIGLIGWAYILYEIFAGEASKVAAAQASAAVKKAYALMKWTVTLGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATAGACTGG------------------------CTCCTGACGGTTCCATTATTGATGATCGAGTTCTACTTAATCCTTGCAGCG---------ATC---ACTAAAGTGTCTGGG---GGTATC------------------------------------TTCTGGAGA---CTTTTAGTCGGTACTCTAGTTATGCTCGTTCCTGGTTATATGGGCGAA---------GCG------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GACGTG------------------ACCGTCGGT---TTTGTTATCGGGCTGATCGGCTGGGCTTACATTCTCTATGAGATC---------------TTC------GCG---GGTGAGGCGAGTAAAGTTGCTGCAGCT------CAG---GCATCTGCTGCTGTT---AAA---AAG---GCT---TAT---GCT---TTAATG---AAGTGGACAGTCACGCTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LLTVPLLMIEFYLILAA---I-TKVSG-GI------------FWR-LLVGTLVMLVPGYMGE---A------G--Y-----------M----------------------DV------TVG-FVIGLIGWAYILYEI-----F--A-GEASKVAAA--Q-ASAAV-K-K-A-Y-A-LM-KWTVTL---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_DQ422245 [III-Gamma4-OM60] clone_20-4_DQ422245 gi|90024010|gb|DQ422245| Uncultured bacterium clone 20-4 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 20-4 putative proteorhodopsin gene, partial cds. DQ422245 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCCTGACGGTTCCATTATTGATGATCGAGTTCTACTTAATCCTTGCAGCGATCACTAAAGTGTCTGGGGGTATCTTCTGGAGACTTTTAGTCGGTACTCTAGTTATGCTCGTTCCTGGTTATATGGGCGAAGCGGGTTACATGGACGTGACCGTCGGTTTTGTTATCGGGCTGATCGGCTGGGCTTACATTCTCTATGAGATCTTCGCGGGTGAGGCGAGTAAAGTTGCTGCAGCTCAGGCATCTGCTGCTGTTAAAAAGGCTTATGCTTTAATGAAGTGGACAGTCACGCTTGGTTGGGCTATATATC RYIDWLLTVPLLMIEFYLILAAITKVSGGIFWRLLVGTLVMLVPGYMGEAGYMDVTVGFVIGLIGWAYILYEIFAGEASKVAAAQASAAVKKAYALMKWTVTLGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCCTGACGGTTCCATTATTGATGATCGAGTTCTACTTAATCCTTGCAGCG---------ATC---ACTAAAGTGTCTGGG---GGTATC------------------------------------TTCTGGAGA---CTTTTAGTCGGTACTCTAGTTATGCTCGTTCCTGGTTATATGGGCGAA---------GCG------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GACGTG------------------ACCGTCGGT---TTTGTTATCGGGCTGATCGGCTGGGCTTACATTCTCTATGAGATC---------------TTC------GCG---GGTGAGGCGAGTAAAGTTGCTGCAGCT------CAG---GCATCTGCTGCTGTT---AAA---AAG---GCT---TAT---GCT---TTAATG---AAGTGGACAGTCACGCTT---------------------------------------------------------------GGTTGG---------GCTATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYLILAA---I-TKVSG-GI------------FWR-LLVGTLVMLVPGYMGE---A------G--Y-----------M----------------------DV------TVG-FVIGLIGWAYILYEI-----F--A-GEASKVAAA--Q-ASAAV-K-K-A-Y-A-LM-KWTVTL---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_DQ422444 [III-Gamma4-OM60] clone_med-50m-h6_DQ422444 gi|90024408|gb|DQ422444| Uncultured bacterium clone med-50m-h6 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-h6 putative proteorhodopsin gene, partial cds. DQ422444 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTCCTGACGGTTCCATTATTGATGATCGAGTTCTACTTAATCCTTGCAGCGATCACTAAAGTGTCTGGGGGTATCTTCTGGAGACTTTTAGTCGGTACTCTAGTTATGCTCGTTCCTGGTTATATGGGCGAAGCGGGTTACATGGACGTGACCGTCGGTTTTGTTATCGGGCTGATCGGCTGGGCTTACATTCTCTATGAGATCTTCGCGGGTGAGGCGAGTAAAGTTGCTGCAGCTCAGGCATCTGCTGCTGTTAAAAAGGCTTATGCTTTAATGAAGTGGACAGTCACGCTTGGTTGGGCTATTTATCCA RYIDWLLTVPLLMIEFYLILAAITKVSGGIFWRLLVGTLVMLVPGYMGEAGYMDVTVGFVIGLIGWAYILYEIFAGEASKVAAAQASAAVKKAYALMKWTVTLGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTCCTGACGGTTCCATTATTGATGATCGAGTTCTACTTAATCCTTGCAGCG---------ATC---ACTAAAGTGTCTGGG---GGTATC------------------------------------TTCTGGAGA---CTTTTAGTCGGTACTCTAGTTATGCTCGTTCCTGGTTATATGGGCGAA---------GCG------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GACGTG------------------ACCGTCGGT---TTTGTTATCGGGCTGATCGGCTGGGCTTACATTCTCTATGAGATC---------------TTC------GCG---GGTGAGGCGAGTAAAGTTGCTGCAGCT------CAG---GCATCTGCTGCTGTT---AAA---AAG---GCT---TAT---GCT---TTAATG---AAGTGGACAGTCACGCTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYLILAA---I-TKVSG-GI------------FWR-LLVGTLVMLVPGYMGE---A------G--Y-----------M----------------------DV------TVG-FVIGLIGWAYILYEI-----F--A-GEASKVAAA--Q-ASAAV-K-K-A-Y-A-LM-KWTVTL---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_DQ203651 [III-Gamma4-OM60] medHO120H1_env_samples_DQ203651 gi|77547750|gb|DQ203651| Uncultured bacterium clone medHO120H1 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120H1 predicted proteorhodopsin gene, partial cds DQ203651 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATACATTGATTGGCTCCTAACGGTTCCGCTACTGATGATCGAGTTCTATTTGATACTCGCAGCAATCACCAAAGTTTCTGGTGGTATCTTCTGGAGACTTTTAGTCGGAACTTTGGTTATGCTCGTTCCTGGTTACATGGGCGAGGCCGGTTACATGGATGTGACCGTAGGCTTTGTCATTGGAATGATTGGTTGGGCTTATATTCTCTACGAGATCTTCGCAGGTGAAGCAAGCAAGGTTGCTGCAGCTCAAGCATCCGCCGCTGTTAAAAAGGCTTATGGCCTAATGAAGTGGACGGTTACATTGGGTTGGGCCATCTACCCA RYIDWLLTVPLLMIEFYLILAAITKVSGGIFWRLLVGTLVMLVPGYMGEAGYMDVTVGFVIGMIGWAYILYEIFAGEASKVAAAQASAAVKKAYGLMKWTVTLGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATTGATTGG------------------------CTCCTAACGGTTCCGCTACTGATGATCGAGTTCTATTTGATACTCGCAGCA---------ATC---ACCAAAGTTTCTGGT---GGTATC------------------------------------TTCTGGAGA---CTTTTAGTCGGAACTTTGGTTATGCTCGTTCCTGGTTACATGGGCGAG---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GATGTG------------------ACCGTAGGC---TTTGTCATTGGAATGATTGGTTGGGCTTATATTCTCTACGAGATC---------------TTC------GCA---GGTGAAGCAAGCAAGGTTGCTGCAGCT------CAA---GCATCCGCCGCTGTT---AAA---AAG---GCT---TAT---GGC---CTAATG---AAGTGGACGGTTACATTG---------------------------------------------------------------GGTTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYLILAA---I-TKVSG-GI------------FWR-LLVGTLVMLVPGYMGE---A------G--Y-----------M----------------------DV------TVG-FVIGMIGWAYILYEI-----F--A-GEASKVAAA--Q-ASAAV-K-K-A-Y-G-LM-KWTVTL---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_DQ203679 [III-Gamma4-OM60] medHO155B8_env_samples_DQ203679 gi|77547806|gb|DQ203679| Uncultured bacterium clone medHO155B8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155B8 predicted proteorhodopsin gene, partial cds DQ203679 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGATTGGCTACTAACGGTTCCACTACTGATGATCGAGTTCTATTTGATCCTCGCAGCAATCACCAAAGTTTCTGGTGGTATCTTCTGGAGACTTTTAGTCGGAACTTTGGTTATGCTCGTTCCTGGTTACATGGGCGAGGCCGGTTACATGGATGTGACCGTAGGCTTTGTCATTGGAATGATTGGTTGGGCTTATATTCTCTACGAGATCTTCGCAGGTGAAGCAAGCAAGGTTGCTGCAGCTCAAGCGTCTGCCGCTGTTAAAAAGGCTTATGGCCTGATGAAGTGGACGGTTACATTGGGTTGGGCAATATATCCA SYIDWLLTVPLLMIEFYLILAAITKVSGGIFWRLLVGTLVMLVPGYMGEAGYMDVTVGFVIGMIGWAYILYEIFAGEASKVAAAQASAAVKKAYGLMKWTVTLGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGATTGG------------------------CTACTAACGGTTCCACTACTGATGATCGAGTTCTATTTGATCCTCGCAGCA---------ATC---ACCAAAGTTTCTGGT---GGTATC------------------------------------TTCTGGAGA---CTTTTAGTCGGAACTTTGGTTATGCTCGTTCCTGGTTACATGGGCGAG---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GATGTG------------------ACCGTAGGC---TTTGTCATTGGAATGATTGGTTGGGCTTATATTCTCTACGAGATC---------------TTC------GCA---GGTGAAGCAAGCAAGGTTGCTGCAGCT------CAA---GCGTCTGCCGCTGTT---AAA---AAG---GCT---TAT---GGC---CTGATG---AAGTGGACGGTTACATTG---------------------------------------------------------------GGTTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LLTVPLLMIEFYLILAA---I-TKVSG-GI------------FWR-LLVGTLVMLVPGYMGE---A------G--Y-----------M----------------------DV------TVG-FVIGMIGWAYILYEI-----F--A-GEASKVAAA--Q-ASAAV-K-K-A-Y-G-LM-KWTVTL---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ926205 [III-Gamma4-OM60] RHOMEO_AG_OTU21 gb|KJ926205| Uncultured bacterium cloneRHOMEO AG OTU21 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU21 putative proteorhodopsin gene, partial cds KJ926205 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGCTCCTTACTGTGCCACTTCTGATGATTGAGTTTTACTTGATCCTTGCTGCAATCGCTAATGTATCCGGTGGTATCTTTTGGCGTCTCCTCGTTGGTACACTTGTGATGCTGGTTCCTGGCTATATGGGCGAGGCGGGCATGTTGAGTACAACGGTTGGCTTCGTAATTGGAATGCTTGGATGGGCCTACATCTTGTACGAAATCTTCGCTGGCGAGGCAAGCAAAGTTGCGGCTAGCCAAGCTCCCGCAGCAGTCCAAAAGTCATATACTCTTATGAAATGGACGGTCTCTGTT WLLTVPLLMIEFYLILAAIANVSGGIFWRLLVGTLVMLVPGYMGEAGMLSTTVGFVIGMLGWAYILYEIFAGEASKVAASQAPAAVQKSYTLMKWTVSV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTCCTTACTGTGCCACTTCTGATGATTGAGTTTTACTTGATCCTTGCTGCA---------ATC---GCTAATGTATCCGGT---GGTATC------------------------------------TTTTGGCGT---CTCCTCGTTGGTACACTTGTGATGCTGGTTCCTGGCTATATGGGCGAG---------GCG------------------GGC------ATG---------------------------------TTG------------------------------------------------------------------AGTACA------------------ACGGTTGGC---TTCGTAATTGGAATGCTTGGATGGGCCTACATCTTGTACGAAATC---------------TTC------GCT---GGCGAGGCAAGCAAAGTTGCGGCTAGC------CAA---GCTCCCGCAGCAGTC---CAA---AAG---TCA---TAT---ACT---CTTATG---AAATGGACGGTCTCTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLMIEFYLILAA---I-ANVSG-GI------------FWR-LLVGTLVMLVPGYMGE---A------G--M-----------L----------------------ST------TVG-FVIGMLGWAYILYEI-----F--A-GEASKVAAS--Q-APAAV-Q-K-S-Y-T-LM-KWTVSV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ926206 [III-Gamma4-OM60] RHOMEO_AG_OTU21_u2 gb|KJ926206| Uncultured bacterium cloneRHOMEO AG OTU21 u2 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU21 u2 putative proteorhodopsin gene, partial cds KJ926206 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGCTCCTTACTGTGCCACTTCTGATGATTGAGTTTTACTTGATCCTTGCTGCAATCGCTAATGTATCCGGTGGTATCTTTTGGCGTCTCCTCGTTGGTACACTTGTGATGCTGGTTCCTGGCTATATGGGCGAGGCGGGCATGTTGAATACAACGGTTGGCTTCGTAATTGGAATGCTTGGATGGGCCTACATCTTGTACGAAATCTTCGCTGGCGAGGCAAGCAAAGTTGCGGCTAGCCAAGCTCCCGCAGCAGTCCAAAAGTCATATACTCTTATGAAATGGACGGTCTCTGTT WLLTVPLLMIEFYLILAAIANVSGGIFWRLLVGTLVMLVPGYMGEAGMLNTTVGFVIGMLGWAYILYEIFAGEASKVAASQAPAAVQKSYTLMKWTVSV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTCCTTACTGTGCCACTTCTGATGATTGAGTTTTACTTGATCCTTGCTGCA---------ATC---GCTAATGTATCCGGT---GGTATC------------------------------------TTTTGGCGT---CTCCTCGTTGGTACACTTGTGATGCTGGTTCCTGGCTATATGGGCGAG---------GCG------------------GGC------ATG---------------------------------TTG------------------------------------------------------------------AATACA------------------ACGGTTGGC---TTCGTAATTGGAATGCTTGGATGGGCCTACATCTTGTACGAAATC---------------TTC------GCT---GGCGAGGCAAGCAAAGTTGCGGCTAGC------CAA---GCTCCCGCAGCAGTC---CAA---AAG---TCA---TAT---ACT---CTTATG---AAATGGACGGTCTCTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLMIEFYLILAA---I-ANVSG-GI------------FWR-LLVGTLVMLVPGYMGE---A------G--M-----------L----------------------NT------TVG-FVIGMLGWAYILYEI-----F--A-GEASKVAAS--Q-APAAV-Q-K-S-Y-T-LM-KWTVSV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ926212 [III-Gamma4-OM60] RHOMEO_AG_OTU27 gb|KJ926212| Uncultured bacterium cloneRHOMEO AG OTU27 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU27 putative proteorhodopsin gene, partial cds KJ926212 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGCTCTTAACTGTTCCGCTGCTAATGATCGAGTTCTACCTGATCTTGTCAGCCATCACCAAAGTTGCGGGTGGGGTCTTCTGGAGGCTTCTTATCGGCACCCTGGTAATGTTAGTGCCGGGATACATGGGCGAGGCCGGCTACATGAACGCGACCCTCGGGTTCGTGATTGGCATACTCGGTTGGGCGTTCATTCTCTACGAAATTTTCGCGGGTGAAGCAAGTAAAGTCGCTGCCAGTCAGGCGCCTGCGGCGGTGCAGAAGTCTTATAACCTTATGAAGTGGACTGTCACTATT WLLTVPLLMIEFYLILSAITKVAGGVFWRLLIGTLVMLVPGYMGEAGYMNATLGFVIGILGWAFILYEIFAGEASKVAASQAPAAVQKSYNLMKWTVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTCTTAACTGTTCCGCTGCTAATGATCGAGTTCTACCTGATCTTGTCAGCC---------ATC---ACCAAAGTTGCGGGT---GGGGTC------------------------------------TTCTGGAGG---CTTCTTATCGGCACCCTGGTAATGTTAGTGCCGGGATACATGGGCGAG---------GCC------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AACGCG------------------ACCCTCGGG---TTCGTGATTGGCATACTCGGTTGGGCGTTCATTCTCTACGAAATT---------------TTC------GCG---GGTGAAGCAAGTAAAGTCGCTGCCAGT------CAG---GCGCCTGCGGCGGTG---CAG---AAG---TCT---TAT---AAC---CTTATG---AAGTGGACTGTCACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLMIEFYLILSA---I-TKVAG-GV------------FWR-LLIGTLVMLVPGYMGE---A------G--Y-----------M----------------------NA------TLG-FVIGILGWAFILYEI-----F--A-GEASKVAAS--Q-APAAV-Q-K-S-Y-N-LM-KWTVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_FJ560821 [III-Gamma4-OM60] HEL101_env_samples_FJ560821 gi|223868789|gb|FJ560821| Uncultured microorganism clone HEL101 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL101 putative proteorhodopsin gene, partial cds FJ560821 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTTCCGCTGCTAATGATCGAGTTCTATCTGATCTTGTCAGCTATCACCAAAGTTGCGGGTGGGGTCTTCTGGAGGCTTCTTATCGGCACCCTGGTAATGTTAGTGCCGGGATACATGGGCGAGGCCGGCTACATGAACGCGACCCTCGGGTTCGTGATTGGCATGCTCGGTTGGGCGTTTATTCTCTACGAAATTTTCGCGGGTGAAGCAAGTAAAGTCGCTGCCAGTCAGGCGCCTGCGGCGGTGCAGAAGTCGTTA TVPLLMIEFYLILSAITKVAGGVFWRLLIGTLVMLVPGYMGEAGYMNATLGFVIGMLGWAFILYEIFAGEASKVAASQAPAAVQKSL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTTCCGCTGCTAATGATCGAGTTCTATCTGATCTTGTCAGCT---------ATC---ACCAAAGTTGCGGGT---GGGGTC------------------------------------TTCTGGAGG---CTTCTTATCGGCACCCTGGTAATGTTAGTGCCGGGATACATGGGCGAG---------GCC------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AACGCG------------------ACCCTCGGG---TTCGTGATTGGCATGCTCGGTTGGGCGTTTATTCTCTACGAAATT---------------TTC------GCG---GGTGAAGCAAGTAAAGTCGCTGCCAGT------CAG---GCGCCTGCGGCGGTG---CAG---AAG---TCG---TTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMIEFYLILSA---I-TKVAG-GV------------FWR-LLIGTLVMLVPGYMGE---A------G--Y-----------M----------------------NA------TLG-FVIGMLGWAFILYEI-----F--A-GEASKVAAS--Q-APAAV-Q-K-S-L-------------------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_DQ203437 [III-Gamma4-OM60] medHO10A3_env_samples_DQ203437 gi|77547322|gb|DQ203437| Uncultured bacterium clone medHO10A3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10A3 predicted proteorhodopsin gene, partial cds DQ203437 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGACTGGCTTTTAACTGTTCCGCTGCTAATGATCGAGTTCTACCTGATCTTGTCAGCCATCACCAAAGTTGCGGGTGGGGTCTTCTGGAGGCTTCTTATCGGCACCCTGGTAATGTTAGTGCCGGGATACATGGGCGAGGCCGGCTACATGAACGCGACCTTCGGTTTCGTGATTGGCATGCTCGGATGGGCCTTCATTCTTTACGAAATTTTCGCGGGTGAAGCAAGTAAAGTCGCTGCCAGTCAGGCGCCTGCGGCGGTGCAGAAGTCTTACAACCTTATGAAGTGGACTGTCACTATTGGTTGGGCAATCTATCCA SYIDWLLTVPLLMIEFYLILSAITKVAGGVFWRLLIGTLVMLVPGYMGEAGYMNATFGFVIGMLGWAFILYEIFAGEASKVAASQAPAAVQKSYNLMKWTVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGACTGG------------------------CTTTTAACTGTTCCGCTGCTAATGATCGAGTTCTACCTGATCTTGTCAGCC---------ATC---ACCAAAGTTGCGGGT---GGGGTC------------------------------------TTCTGGAGG---CTTCTTATCGGCACCCTGGTAATGTTAGTGCCGGGATACATGGGCGAG---------GCC------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AACGCG------------------ACCTTCGGT---TTCGTGATTGGCATGCTCGGATGGGCCTTCATTCTTTACGAAATT---------------TTC------GCG---GGTGAAGCAAGTAAAGTCGCTGCCAGT------CAG---GCGCCTGCGGCGGTG---CAG---AAG---TCT---TAC---AAC---CTTATG---AAGTGGACTGTCACTATT---------------------------------------------------------------GGTTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LLTVPLLMIEFYLILSA---I-TKVAG-GV------------FWR-LLIGTLVMLVPGYMGE---A------G--Y-----------M----------------------NA------TFG-FVIGMLGWAFILYEI-----F--A-GEASKVAAS--Q-APAAV-Q-K-S-Y-N-LM-KWTVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_FJ560838 [III-Gamma4-OM60] HEL124_env_samples_FJ560838 gi|223868823|gb|FJ560838| Uncultured microorganism clone HEL124 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL124 putative proteorhodopsin gene, partial cds FJ560838 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTGCCCCTGCTAATGATAGAGTTCTATCTCATACTCTCTGCCATCACAAAGGTGGCTGGTGGAGTGTTCTGGCGTCTACTGATTGGCACGCTGGTTATGCTGATCCCCGGATACATGGGCGAAGCGGGCTACATGAACGCGACACTCGGCTTTGCAATAGGCATGTTAGGGTGGGCCTTCATTCTCTATGAAATTTTTGCCGGCGAAGCGAGCCGGGTCGCGGCCAGCGCAGCTCCGCCTGCTGTTCAGAAATCGTTACAATCTGATGAAGTG TVPLLMIEFYLILSAITKVAGGVFWRLLIGTLVMLIPGYMGEAGYMNATLGFAIGMLGWAFILYEIFAGEASRVAASAAPPAVQKSLQSDEV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTGCCCCTGCTAATGATAGAGTTCTATCTCATACTCTCTGCC---------ATC---ACAAAGGTGGCTGGT---GGAGTG------------------------------------TTCTGGCGT---CTACTGATTGGCACGCTGGTTATGCTGATCCCCGGATACATGGGCGAA---------GCG------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AACGCG------------------ACACTCGGC---TTTGCAATAGGCATGTTAGGGTGGGCCTTCATTCTCTATGAAATT---------------TTT------GCC---GGCGAAGCGAGCCGGGTCGCGGCCAGC------GCA---GCTCCGCCTGCTGTT---CAG---AAA---TCG---------------TTACAA---TCTGATGAAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMIEFYLILSA---I-TKVAG-GV------------FWR-LLIGTLVMLIPGYMGE---A------G--Y-----------M----------------------NA------TLG-FAIGMLGWAFILYEI-----F--A-GEASRVAAS--A-APPAV-Q-K-S-----LQ-SDEV---------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_FJ560809 [III-Gamma4-OM60] HEL86_env_samples_FJ560809 gi|223868765|gb|FJ560809| Uncultured microorganism clone HEL86 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL86 putative proteorhodopsin gene, partial cds FJ560809 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTGCCCCTGCTAATGATAGAGTTCTATCTCATACTCTCTGCCATCACAAAGGTGGCTGGTGGAGTGTTTTGGCGTCTACTGATTGGCACGCTGGTTATGCTGATCCCCGGATACATGGGCGAAGCGGGCTACATGAACGCGACACTCGGCTTTGCAATAGGCATGTTAGGGTGGGCCTTCATTCTCTATGAAATTTTTGCCGGCGAAGCGAGCCGGGTCGCGGCCAGCGCAGCTCCGCCTGCTGTTCAAGAAATCTTACAATCTGATGAAGTG TVPLLMIEFYLILSAITKVAGGVFWRLLIGTLVMLIPGYMGEAGYMNATLGFAIGMLGWAFILYEIFAGEASRVAASAAPPAVQEILQSDEV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTGCCCCTGCTAATGATAGAGTTCTATCTCATACTCTCTGCC---------ATC---ACAAAGGTGGCTGGT---GGAGTG------------------------------------TTTTGGCGT---CTACTGATTGGCACGCTGGTTATGCTGATCCCCGGATACATGGGCGAA---------GCG------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AACGCG------------------ACACTCGGC---TTTGCAATAGGCATGTTAGGGTGGGCCTTCATTCTCTATGAAATT---------------TTT------GCC---GGCGAAGCGAGCCGGGTCGCGGCCAGC------GCA---GCTCCGCCTGCTGTT---CAA---GAA---ATC---------------TTACAA---TCTGATGAAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMIEFYLILSA---I-TKVAG-GV------------FWR-LLIGTLVMLIPGYMGE---A------G--Y-----------M----------------------NA------TLG-FAIGMLGWAFILYEI-----F--A-GEASRVAAS--A-APPAV-Q-E-I-----LQ-SDEV---------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_FJ560850 [III-Gamma4-OM60] HEL138_env_samples_FJ560850 gi|223868847|gb|FJ560850| Uncultured microorganism clone HEL138 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL138 putative proteorhodopsin gene, partial cds FJ560850 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTGCCCCTGCTAATGATAGAGTTCTATCTCATACTCTCTGCCATCACAAAGGTGGCTGGTGGAGTGTTCTGGCGTCTACTGATTGGCACGCTGGTTATGCTGATCCCCGGATACATGGGCGAAGCGGGCTACATGAACGCGACACTCGGCTTTGCAATAGGCATGTTAGGGTGGGCCTTCATTCTCTATGAAATTTTTGCCGGCGAAGCGAGCCGGGCCGCGGCCAGCGCAGCTCCGCCTGCTGTTCAGAAATGGTTACAATCTGATGAAGTG TVPLLMIEFYLILSAITKVAGGVFWRLLIGTLVMLIPGYMGEAGYMNATLGFAIGMLGWAFILYEIFAGEASRAAASAAPPAVQKWLQSDEV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTGCCCCTGCTAATGATAGAGTTCTATCTCATACTCTCTGCC---------ATC---ACAAAGGTGGCTGGT---GGAGTG------------------------------------TTCTGGCGT---CTACTGATTGGCACGCTGGTTATGCTGATCCCCGGATACATGGGCGAA---------GCG------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AACGCG------------------ACACTCGGC---TTTGCAATAGGCATGTTAGGGTGGGCCTTCATTCTCTATGAAATT---------------TTT------GCC---GGCGAAGCGAGCCGGGCCGCGGCCAGC------GCA---GCTCCGCCTGCTGTT---CAG---AAA---------------------------------TGGTTACAATCTGAT---------------------------------------------------------------GAAGTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMIEFYLILSA---I-TKVAG-GV------------FWR-LLIGTLVMLIPGYMGE---A------G--Y-----------M----------------------NA------TLG-FAIGMLGWAFILYEI-----F--A-GEASRAAAS--A-APPAV-Q-K-----------WLQSD---------------------EV--------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_FJ560827 [III-Gamma4-OM60] HEL110_env_samples_FJ560827 gi|223868801|gb|FJ560827| Uncultured microorganism clone HEL110 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL110 putative proteorhodopsin gene, partial cds FJ560827 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTGCCCCTGCTAATGATAGAGTTCTATCTCATACTCTCTGCCATCACAAAGGTGGCTGGTGGAGTGTTCTGGCGTCTACTGATTGGCACGCTGGTTATGCTGATCCCCGGATACATGGGCGAAGCGGGCTACATGAACGCGACACTCGGCTTTGCAATAGGCATGTTAGGGTGGGCCTTCATTCTCTATGAAATTTCTGCCGGCGAAGCGAGCCGGGTCGCGGCCAGCGCAGCTCCGCCTGCTGTTCAGAAATCTGTACAATCTGATGAAGTG TVPLLMIEFYLILSAITKVAGGVFWRLLIGTLVMLIPGYMGEAGYMNATLGFAIGMLGWAFILYEISAGEASRVAASAAPPAVQKSVQSDEV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTGCCCCTGCTAATGATAGAGTTCTATCTCATACTCTCTGCC---------ATC---ACAAAGGTGGCTGGT---GGAGTG------------------------------------TTCTGGCGT---CTACTGATTGGCACGCTGGTTATGCTGATCCCCGGATACATGGGCGAA---------GCG------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AACGCG------------------ACACTCGGC---TTTGCAATAGGCATGTTAGGGTGGGCCTTCATTCTCTATGAAATT---------------TCT------GCC---GGCGAAGCGAGCCGGGTCGCGGCCAGC------GCA---GCTCCGCCTGCTGTT---CAG---AAA---TCT---------------GTACAA---TCTGATGAAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMIEFYLILSA---I-TKVAG-GV------------FWR-LLIGTLVMLIPGYMGE---A------G--Y-----------M----------------------NA------TLG-FAIGMLGWAFILYEI-----S--A-GEASRVAAS--A-APPAV-Q-K-S-----VQ-SDEV---------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_FJ560791 [III-Gamma4-OM60] HEL63_env_samples_FJ560791 gi|223868729|gb|FJ560791| Uncultured microorganism clone HEL63 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL63 putative proteorhodopsin gene, partial cds FJ560791 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTGCCCCTGCTAATGATAGAGTTCTATCTCATACTCTCTGCCATCACAAAGGTGGCTGGTGGAGTGTTCTGGCGTCTACTGATTGGCACGCTGGTTATGCTGATCCCCGGATACATGGGCGAAGCGGGCTACATGAACGCGACACTCGGCTTTGCAATAGGCATGTTAGGGTGGGCCTTCATTCTCTATGAAATTTTTGCCGGCGAAGCGAGCCGGGTCGCGGCCAGCGCAGCTCCGCCTGCTGTTCAGAAATACTTGACAATC TVPLLMIEFYLILSAITKVAGGVFWRLLIGTLVMLIPGYMGEAGYMNATLGFAIGMLGWAFILYEIFAGEASRVAASAAPPAVQKYLTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTGCCCCTGCTAATGATAGAGTTCTATCTCATACTCTCTGCC---------ATC---ACAAAGGTGGCTGGT---GGAGTG------------------------------------TTCTGGCGT---CTACTGATTGGCACGCTGGTTATGCTGATCCCCGGATACATGGGCGAA---------GCG------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AACGCG------------------ACACTCGGC---TTTGCAATAGGCATGTTAGGGTGGGCCTTCATTCTCTATGAAATT---------------TTT------GCC---GGCGAAGCGAGCCGGGTCGCGGCCAGC------GCA---GCTCCGCCTGCTGTT---CAG---AAA---TAC---TTG---ACA---ATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMIEFYLILSA---I-TKVAG-GV------------FWR-LLIGTLVMLIPGYMGE---A------G--Y-----------M----------------------NA------TLG-FAIGMLGWAFILYEI-----F--A-GEASRVAAS--A-APPAV-Q-K-Y-L-T-I---------------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_FJ560780 [III-Gamma4-OM60] HEL44_env_samples_FJ560780 gi|223868707|gb|FJ560780| Uncultured microorganism clone HEL44 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL44 putative proteorhodopsin gene, partial cds FJ560780 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTGCCCCTGCTAATGATAGAGTTCTATCTCATACTCTCTGCCATCACAAAGGTGGCTGGTGGAGTGTTCTGGCGTCTACTGATTGGCACGCTGGTTATGCTGATCCCCGGATACATGGGCGAAGCGGGCTACATGAACGCGACACTCGGCTTTGCAATAGGCATGTTAGGGTGGGCCTTCATTCTCTATGAAATTTTTGCCGGCGAAGCGAGCCGGGTCGCGGCCAGCGCAGCTCCGCCTGCTGTTCAGAAA TVPLLMIEFYLILSAITKVAGGVFWRLLIGTLVMLIPGYMGEAGYMNATLGFAIGMLGWAFILYEIFAGEASRVAASAAPPAVQK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTGCCCCTGCTAATGATAGAGTTCTATCTCATACTCTCTGCC---------ATC---ACAAAGGTGGCTGGT---GGAGTG------------------------------------TTCTGGCGT---CTACTGATTGGCACGCTGGTTATGCTGATCCCCGGATACATGGGCGAA---------GCG------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AACGCG------------------ACACTCGGC---TTTGCAATAGGCATGTTAGGGTGGGCCTTCATTCTCTATGAAATT---------------TTT------GCC---GGCGAAGCGAGCCGGGTCGCGGCCAGC------GCA---GCTCCGCCTGCTGTT---CAG---AAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMIEFYLILSA---I-TKVAG-GV------------FWR-LLIGTLVMLIPGYMGE---A------G--Y-----------M----------------------NA------TLG-FAIGMLGWAFILYEI-----F--A-GEASRVAAS--A-APPAV-Q-K------------------------------------------------------------------------------------------------------------------------------------------------ [III-Gamma4-OM60]_DQ422358 [III-Gamma4-OM60] clone_med-50m-a3_DQ422358 gi|90024236|gb|DQ422358| Uncultured bacterium clone med-50m-a3 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-a3 putative proteorhodopsin gene, partial cds. DQ422358 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTACTGACTGTGCCGCTGCTGATGATTGAGTTCTACCTCATCCTGTCAGCTATCACGAAAGTTGCCGGTGGCGTATTCTGGCGACTGCTTATTGGCACCTTGGTAATGCTAATTCCGGGCTACATGGGCGAAGCTGGCTATTTGAACACCACCGTAGGCTTCGTTATTGGCATGCTCGGATGGGCGTTTATCCTCTATGAGATCTTTGCCGGCGAGGCAAGTCGTGTCGCAGCAAGCCAAGCGCCAGCCGCAGTGCAGAAATCCTACAACTTGATGAAGTGGACTGTATCGGTCGGGTGGGCGATTTATCCA RYIDWLLTVPLLMIEFYLILSAITKVAGGVFWRLLIGTLVMLIPGYMGEAGYLNTTVGFVIGMLGWAFILYEIFAGEASRVAASQAPAAVQKSYNLMKWTVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTGACTGTGCCGCTGCTGATGATTGAGTTCTACCTCATCCTGTCAGCT---------ATC---ACGAAAGTTGCCGGT---GGCGTA------------------------------------TTCTGGCGA---CTGCTTATTGGCACCTTGGTAATGCTAATTCCGGGCTACATGGGCGAA---------GCT------------------GGC------TAT---------------------------------TTG------------------------------------------------------------------AACACC------------------ACCGTAGGC---TTCGTTATTGGCATGCTCGGATGGGCGTTTATCCTCTATGAGATC---------------TTT------GCC---GGCGAGGCAAGTCGTGTCGCAGCAAGC------CAA---GCGCCAGCCGCAGTG---CAG---AAA---TCC---TAC---AAC---TTGATG---AAGTGGACTGTATCGGTC---------------------------------------------------------------GGGTGG---------GCGATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYLILSA---I-TKVAG-GV------------FWR-LLIGTLVMLIPGYMGE---A------G--Y-----------L----------------------NT------TVG-FVIGMLGWAFILYEI-----F--A-GEASRVAAS--Q-APAAV-Q-K-S-Y-N-LM-KWTVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_DQ422410 [III-Gamma4-OM60] clone_med-50m-e7_DQ422410 gi|90024340|gb|DQ422410| Uncultured bacterium clone med-50m-e7 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-e7 putative proteorhodopsin gene, partial cds. DQ422410 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTACTGACTGTGCCGCTGCTGATGATTGAGTTCTACCTCATCCCGTCAGCTATCACGAAAGTTGCCGGTGGCGTGTTCTGGCGACTGCTTATTGGCACCTTGGTAGTGCTAATTCCGGGCTACATGGGCGAAGCTGGCTATTTGAACACCACCGTAGGCTTCGTTATTGGCATGCTCGGATGGGCGTTTATCCTCTATGAGATCTTTGCCGGCGAGGCAAGTCGTGTCGCAGCAAGCCAAGCGCCAGCCGCAGTGCAGAAATCCTACAACTTGATGAAGTGGACTGTATCGGTCGGTTGGGCTATTTATCCA RYIDWLLTVPLLMIEFYLIPSAITKVAGGVFWRLLIGTLVVLIPGYMGEAGYLNTTVGFVIGMLGWAFILYEIFAGEASRVAASQAPAAVQKSYNLMKWTVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTGACTGTGCCGCTGCTGATGATTGAGTTCTACCTCATCCCGTCAGCT---------ATC---ACGAAAGTTGCCGGT---GGCGTG------------------------------------TTCTGGCGA---CTGCTTATTGGCACCTTGGTAGTGCTAATTCCGGGCTACATGGGCGAA---------GCT------------------GGC------TAT---------------------------------TTG------------------------------------------------------------------AACACC------------------ACCGTAGGC---TTCGTTATTGGCATGCTCGGATGGGCGTTTATCCTCTATGAGATC---------------TTT------GCC---GGCGAGGCAAGTCGTGTCGCAGCAAGC------CAA---GCGCCAGCCGCAGTG---CAG---AAA---TCC---TAC---AAC---TTGATG---AAGTGGACTGTATCGGTC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYLIPSA---I-TKVAG-GV------------FWR-LLIGTLVVLIPGYMGE---A------G--Y-----------L----------------------NT------TVG-FVIGMLGWAFILYEI-----F--A-GEASRVAAS--Q-APAAV-Q-K-S-Y-N-LM-KWTVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_DQ422200 [III-Gamma4-OM60] clone_med-0m-e12_DQ422200 gi|90023920|gb|DQ422200| Uncultured bacterium clone med-0m-e12 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-e12 putative proteorhodopsin gene, partial cds. DQ422200 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTACTGACTGTGCCGCTGCTGATGATTGAGTTCTACCTCATCCTGTCAGCTATCACGAAAGTTGCCGGTGGCGTATTCTGGCGACTGCTTATTGGCACCTTGGTAATGCTAATTCCGGGCTACATGGGCGAAGCTGGCTATTTGAACACCACCGTAGGCTTCGTTATTGGCATGCTCGGATGGGCGTTTATCCTCTATGAGACCTTTGCCGGCGAGGCAAGTCGTGTCGCAGCAAGCCAAGCGCCAGCCGCAGTGCAGAAATCCTACAACTTGATGAAGTGGACTGTATCGGTCGGTTGGGCTATTTATCCA RYIDWLLTVPLLMIEFYLILSAITKVAGGVFWRLLIGTLVMLIPGYMGEAGYLNTTVGFVIGMLGWAFILYETFAGEASRVAASQAPAAVQKSYNLMKWTVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTGACTGTGCCGCTGCTGATGATTGAGTTCTACCTCATCCTGTCAGCT---------ATC---ACGAAAGTTGCCGGT---GGCGTA------------------------------------TTCTGGCGA---CTGCTTATTGGCACCTTGGTAATGCTAATTCCGGGCTACATGGGCGAA---------GCT------------------GGC------TAT---------------------------------TTG------------------------------------------------------------------AACACC------------------ACCGTAGGC---TTCGTTATTGGCATGCTCGGATGGGCGTTTATCCTCTATGAGACC---------------TTT------GCC---GGCGAGGCAAGTCGTGTCGCAGCAAGC------CAA---GCGCCAGCCGCAGTG---CAG---AAA---TCC---TAC---AAC---TTGATG---AAGTGGACTGTATCGGTC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYLILSA---I-TKVAG-GV------------FWR-LLIGTLVMLIPGYMGE---A------G--Y-----------L----------------------NT------TVG-FVIGMLGWAFILYET-----F--A-GEASRVAAS--Q-APAAV-Q-K-S-Y-N-LM-KWTVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_DQ203545 [III-Gamma4-OM60] MedHO1202E6_env_samples_DQ203545 gi|77547538|gb|DQ203545| Uncultured bacterium clone MedHO1202E6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202E6 predicted proteorhodopsin gene, partial cds DQ203545 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGCTATATTGATTGGCTATTGACCGTGCCGCTGCTGATGATTGAGTTCTACCTCATTCTGTCAGCGATCACAAAAGTCGCCGGTGGAGTATTCTGGCGACTGCTTATTGGCACCCTGGTCATGCTAATCCCGGGCTACATGGGTGAGGCTGGGTACTTGAACACCACTGTAGGTTTCGTTATCGGTATGCTCGGATGGGCATTCATCCTGTACGAGATCTTTGCCGGTGAGGCCAGTCGCGTCGCAGCAAGCCAGGCGCCAGCCGCAGTGCAGAAATCGTATAATTTGATGAAGTGGACTGTATCGGTTGGCTGGGCCATATATCCA RYIDWLLTVPLLMIEFYLILSAITKVAGGVFWRLLIGTLVMLIPGYMGEAGYLNTTVGFVIGMLGWAFILYEIFAGEASRVAASQAPAAVQKSYNLMKWTVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTATATTGATTGG------------------------CTATTGACCGTGCCGCTGCTGATGATTGAGTTCTACCTCATTCTGTCAGCG---------ATC---ACAAAAGTCGCCGGT---GGAGTA------------------------------------TTCTGGCGA---CTGCTTATTGGCACCCTGGTCATGCTAATCCCGGGCTACATGGGTGAG---------GCT------------------GGG------TAC---------------------------------TTG------------------------------------------------------------------AACACC------------------ACTGTAGGT---TTCGTTATCGGTATGCTCGGATGGGCATTCATCCTGTACGAGATC---------------TTT------GCC---GGTGAGGCCAGTCGCGTCGCAGCAAGC------CAG---GCGCCAGCCGCAGTG---CAG---AAA---TCG---TAT---AAT---TTGATG---AAGTGGACTGTATCGGTT---------------------------------------------------------------GGCTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYLILSA---I-TKVAG-GV------------FWR-LLIGTLVMLIPGYMGE---A------G--Y-----------L----------------------NT------TVG-FVIGMLGWAFILYEI-----F--A-GEASRVAAS--Q-APAAV-Q-K-S-Y-N-LM-KWTVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_DQ203470 [III-Gamma4-OM60] medHO10F1_env_samples_DQ203470 gi|77547388|gb|DQ203470| Uncultured bacterium clone medHO10F1 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10F1 predicted proteorhodopsin gene, partial cds DQ203470 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGGTACATTGACTGGCTTCTGACTGTGCCGCTGCTGATGATTGAGTTCTACCTCATTCTGTCAGCTATCACAAAAGTCTCTGGTGGTGTGTTTTGGCGCCTGCTGATTGGTACTTTAGTCATGCTGATACCTGGATACATGGGTGAGGCTGGCTACTTAAACGCTACCGTCGGTTTTGTCATCGGCATGATCGGATGGGCTTACATCCTTTACGAGATCTTTGCTGGCGAAGCGAGCCAAGTTGCTGCAAACCAAGCAACCGCGGCTGTGCAAAAGTCATACGGACTCATGAAGTGGACGGTAACAATTGGTTGGGCCATCTACCCA RYIDWLLTVPLLMIEFYLILSAITKVSGGVFWRLLIGTLVMLIPGYMGEAGYLNATVGFVIGMIGWAYILYEIFAGEASQVAANQATAAVQKSYGLMKWTVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTACATTGACTGG------------------------CTTCTGACTGTGCCGCTGCTGATGATTGAGTTCTACCTCATTCTGTCAGCT---------ATC---ACAAAAGTCTCTGGT---GGTGTG------------------------------------TTTTGGCGC---CTGCTGATTGGTACTTTAGTCATGCTGATACCTGGATACATGGGTGAG---------GCT------------------GGC------TAC---------------------------------TTA------------------------------------------------------------------AACGCT------------------ACCGTCGGT---TTTGTCATCGGCATGATCGGATGGGCTTACATCCTTTACGAGATC---------------TTT------GCT---GGCGAAGCGAGCCAAGTTGCTGCAAAC------CAA---GCAACCGCGGCTGTG---CAA---AAG---TCA---TAC---GGA---CTCATG---AAGTGGACGGTAACAATT---------------------------------------------------------------GGTTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYLILSA---I-TKVSG-GV------------FWR-LLIGTLVMLIPGYMGE---A------G--Y-----------L----------------------NA------TVG-FVIGMIGWAYILYEI-----F--A-GEASQVAAN--Q-ATAAV-Q-K-S-Y-G-LM-KWTVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ926165 [III-Gamma4-OM60] RHOMEO_AG_OTU1 gb|KJ926165| Uncultured bacterium cloneRHOMEO AG OTU1 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU1 putative proteorhodopsin gene, partial cds KJ926165 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGCTTCTCACCGTGCCACTGCTGATGATCGAGTTCTATCTAATTCTTGCAGCGATCACTGCGGTTTCGGGCGGCATCTTCTGGCGTCTGTTGATTGGTACGCTAGTGATGTTGATCCCAGGCTACATGGGCGAAGCGGGCTATCTCAACGCTACCGTCGGATTCGTAATAGGTATGATCGGTTGGGCCTACATCCTATATGAAATCTTCGCTGGTGAAGCAAGTAAAGTTGCGGCTGGACAAGCACCTGCGGCAGTGCAAAAGGCCTACGGCTTAATGAAATGGACAGTGACAATC WLLTVPLLMIEFYLILAAITAVSGGIFWRLLIGTLVMLIPGYMGEAGYLNATVGFVIGMIGWAYILYEIFAGEASKVAAGQAPAAVQKAYGLMKWTVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTTCTCACCGTGCCACTGCTGATGATCGAGTTCTATCTAATTCTTGCAGCG---------ATC---ACTGCGGTTTCGGGC---GGCATC------------------------------------TTCTGGCGT---CTGTTGATTGGTACGCTAGTGATGTTGATCCCAGGCTACATGGGCGAA---------GCG------------------GGC------TAT---------------------------------CTC------------------------------------------------------------------AACGCT------------------ACCGTCGGA---TTCGTAATAGGTATGATCGGTTGGGCCTACATCCTATATGAAATC---------------TTC------GCT---GGTGAAGCAAGTAAAGTTGCGGCTGGA------CAA---GCACCTGCGGCAGTG---CAA---AAG---GCC---TAC---GGC---TTAATG---AAATGGACAGTGACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLMIEFYLILAA---I-TAVSG-GI------------FWR-LLIGTLVMLIPGYMGE---A------G--Y-----------L----------------------NA------TVG-FVIGMIGWAYILYEI-----F--A-GEASKVAAG--Q-APAAV-Q-K-A-Y-G-LM-KWTVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_AEIG01000085 [III-Gamma4-OM60] Gammaproteobacterium_IMCC3088_ctg_87_WGS_AEIG01000085 gi|328921323|gb|AEIG01000085| Gamma proteobacterium IMCC3088 ctg 87, whole genome shotgun sequence Gamma proteobacterium IMCC3088 ctg 87, whole genome shotgun sequence AEIG01000085 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Gammaproteobacteria/OMG group/OM60 clade] taxon:876044 genomic_DNA strain 14APR2011 #na #na China Sea marine 37.4 126.24 Genome Sequence of Strain IMCC3088, a ProteorhodopsinContaining Marine Bacterium Belonging to the OM60/NOR5 Clade Jang,Y., Oh,H.M., Kang,I., Lee,K., Yang,S.J. and Cho,J.C. J. Bacteriol. 193 (13), 34153416 (2011) 21551310 #na ATGCTGCAATCGGGTGACTTCGTAGGTTACTCGTTTTGGTTAATTTCTATGGCTCTGGCCGCGTCAACGATCTTCTTCTTGATGGAAGCTCTGCGAATGGGCGGCAAATGGGCAACAAGTTTGACAGTGTCGGCCTTGGTAACATTCATTGCTGCCTTCCACTACATGTACATGCGTGAAGTGTGGGTCAGTACGGGTGCGTCGCCAACCGACTTCCGATACATTGATTGGTTGCTGACAGTACCGCTGCTGATGATCGAGTTCTACTTGATTCTGGCCGCGATTACCAAAGTGTCAGGTGGTATTTTCTGGCGCTTGCTGATTGGTACGCTGGTCATGCTGGTACCCGGTTACATGGGCGAAGCGGGCTACCTAAATGTGACCGTTGGATTCGTCATCGGTATGTTAGGATGGTTCTATATTCTGTACGAAATTTTTGCGGGCGAAGCCAGCAAGGTTGCGGCAGCAGAAGCCACTGCGGCAGTTCAGAAGTCTTACGGTCTGATGAAATGGACAGTAACGATTGGCTGGGCAATTTACCCTATTGGCTACTTCTTGGGTTACTTGGCGGGTGGTACCGATCAGGGAACCCTGAATATCGTTTACAACCTAGCAGACGTGTTGAACAAGATCGCGTTTGGCTTGTTCATTTGGTACGCAGCAAACGAAGACACTTCAGCGAAAGCT MLQSGDFVGYSFWLISMALAASTIFFLMEALRMGGKWATSLTVSALVTFIAAFHYMYMREVWVSTGASPTDFRYIDWLLTVPLLMIEFYLILAAITKVSGGIFWRLLIGTLVMLVPGYMGEAGYLNVTVGFVIGMLGWFYILYEIFAGEASKVAAAEATAAVQKSYGLMKWTVTIGWAIYPIGYFLGYLAGGTDQGTLNIVYNLADVLNKIAFGLFIWYAANEDTSAKA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGCAATCGGGTGACTTCGTAGGTTACTCGTTTTGGTTAATTTCTATGGCTCTGGCCGCGTCAACGATCTTCTTCTTGATGGAAGCTCTGCGAATGGGCGGC---AAATGGGCAACAAGTTTGACAGTGTCGGCCTTGGTAACATTCATTGCTGCCTTCCACTACATGTACATGCGTGAAGTGTGGGTC------------------------------AGTACG---------------------GGTGCGTCGCCAACCGACTTCCGATACATTGATTGG------------------------TTGCTGACAGTACCGCTGCTGATGATCGAGTTCTACTTGATTCTGGCCGCG---------ATT---ACCAAAGTGTCAGGT---GGTATT------------------------------------TTCTGGCGC---TTGCTGATTGGTACGCTGGTCATGCTGGTACCCGGTTACATGGGCGAA---------GCG------------------GGC------TAC---------------------------------CTA------------------------------------------------------------------AATGTG------------------ACCGTTGGA---TTCGTCATCGGTATGTTAGGATGGTTCTATATTCTGTACGAAATT---------------TTT------GCG---GGCGAAGCCAGCAAGGTTGCGGCAGCA------GAA---GCCACTGCGGCAGTT---CAG---AAG---TCT---TAC---GGT---CTGATG---AAATGGACAGTAACGATT---------------------------------------------------------------GGCTGG---------GCAATTTACCCTATTGGCTACTTCTTGGGTTACTTGGCG---GGTGGT---------ACC---GATCAGGGA------------------------ACCCTGAATATCGTTTACAACCTAGCAGACGTGTTGAACAAGATCGCGTTTGGCTTGTTCATTTGGTACGCAGCAAACGAAGAC---ACTTCAGCGAAAGCT------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------MLQSGDFVGYSFWLISMALAASTIFFLMEALRMGG-KWATSLTVSALVTFIAAFHYMYMREVWV----------ST-------GASPTDFRYIDW--------LLTVPLLMIEFYLILAA---I-TKVSG-GI------------FWR-LLIGTLVMLVPGYMGE---A------G--Y-----------L----------------------NV------TVG-FVIGMLGWFYILYEI-----F--A-GEASKVAAA--E-ATAAV-Q-K-S-Y-G-LM-KWTVTI---------------------GW---AIYPIGYFLGYLA-GG---T-DQG--------TLNIVYNLADVLNKIAFGLFIWYAANED-TSAKA------------------------------------ [III-Gamma4-OM60]_JX863208 [III-Gamma4-OM60] MALINA_OTU61_403_L_env_samples_JX863208 gi|425477366|gb|JX863208| Uncultured bacterium clone MALINA OTU61 403 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU61 403 L putative proteorhodopsin gene, partial cds JX863208 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 16Aug2009 0m_depth Arctic Ocean marine 69.51 -133.42 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGTTGACTGTACCTTTACTGATGATCGAGTTCTATCTGATCCTGTCAGCGATCACGAAAGTGTCAGGTGGCATTTTCTGGCGTCTGCTGATCGGTACGTTGGTCATGCTGGTTCCAGGATACATGGGAGAAGCGGGCTGCCTGAACGTTACCGTTGGTTTCACGATCGGTATGTTGGGATGGTTCTACATCCTTTATGAAATCTTTGCCGGTGAAGCAAGTAAAGTTGCAGCCTCACTAGCATCGCCAGCAGTACAGAAGTCATTCAGTCTGATGAAGTGGACTGTCACCATT WLLTVPLLMIEFYLILSAITKVSGGIFWRLLIGTLVMLVPGYMGEAGCLNVTVGFTIGMLGWFYILYEIFAGEASKVAASLASPAVQKSFSLMKWTVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGTTGACTGTACCTTTACTGATGATCGAGTTCTATCTGATCCTGTCAGCG---------ATC---ACGAAAGTGTCAGGT---GGCATT------------------------------------TTCTGGCGT---CTGCTGATCGGTACGTTGGTCATGCTGGTTCCAGGATACATGGGAGAA---------GCG------------------GGC------TGC---------------------------------CTG------------------------------------------------------------------AACGTT------------------ACCGTTGGT---TTCACGATCGGTATGTTGGGATGGTTCTACATCCTTTATGAAATC---------------TTT------GCC---GGTGAAGCAAGTAAAGTTGCAGCCTCA------CTA---GCATCGCCAGCAGTA---CAG---AAG---TCA---TTC---AGT---CTGATG---AAGTGGACTGTCACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLMIEFYLILSA---I-TKVSG-GI------------FWR-LLIGTLVMLVPGYMGE---A------G--C-----------L----------------------NV------TVG-FTIGMLGWFYILYEI-----F--A-GEASKVAAS--L-ASPAV-Q-K-S-F-S-LM-KWTVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-Himb30]_KJ926166 [III-Gamma4-Himb30] RHOMEO_AG_OTU10 gb|KJ926166| Uncultured bacterium cloneRHOMEO AG OTU10 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU10 putative proteorhodopsin gene, partial cds KJ926166 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Himb30-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Himb30-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGTTATTGACGGTCCCACTCTTGATGATTGAGTTCTTCTTGGTCTTGAGAGCGATTGGTAACGCATCAGGTGGCATCTTCTGGCGCCTCCTCATCGGTACACTCGTCATGCTCGTCCCGGGCTACATGGGTGAAGCCGGTTACATCAACGTCACCGTTGGCTTCGTCATTGGTATGCTTGGATGGTTCTACATTCTGTATGAAATCTTCGCAGGTGAAGCAGCACAAATGGCTGCAGAACAAGCGCCTGAAGCAGTTCAGAGTGCATACGGCACAATGCGTTGGGTTGTGACAATC WLLTVPLLMIEFFLVLRAIGNASGGIFWRLLIGTLVMLVPGYMGEAGYINVTVGFVIGMLGWFYILYEIFAGEAAQMAAEQAPEAVQSAYGTMRWVVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTATTGACGGTCCCACTCTTGATGATTGAGTTCTTCTTGGTCTTGAGAGCG---------ATT---GGTAACGCATCAGGT---GGCATC------------------------------------TTCTGGCGC---CTCCTCATCGGTACACTCGTCATGCTCGTCCCGGGCTACATGGGTGAA---------GCC------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGTC------------------ACCGTTGGC---TTCGTCATTGGTATGCTTGGATGGTTCTACATTCTGTATGAAATC---------------TTC------GCA---GGTGAAGCAGCACAAATGGCTGCAGAA------CAA---GCGCCTGAAGCAGTT---CAG---AGT---GCA---TAC---GGC---ACAATG---CGTTGGGTTGTGACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLMIEFFLVLRA---I-GNASG-GI------------FWR-LLIGTLVMLVPGYMGE---A------G--Y-----------I----------------------NV------TVG-FVIGMLGWFYILYEI-----F--A-GEAAQMAAE--Q-APEAV-Q-S-A-Y-G-TM-RWVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-Himb30]_1105158946784 [III-Gamma4-Himb30] JCVI_ORF_1105158946784_GS008_Coastal_1m jcvi|1105158946784| 1105158946784 JCVI ORF 1105158946784 1105158946784 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Himb30-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Himb30-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 16-nov-03 Coastal/1m_depth/S_26.5_psu/GS008/Newport_Harbor/RI/North_American_East_Coast Atlantic Ocean marine 41.485832 -71.35111 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf CTTTTTTTTTTTTTCAGGTTGCAGAGCAGAATGACACTAACAAAACTGATGAAGGGCCTTGCGCCCGTCGGCTTGCTTGCCGCGCTGCCATCAACAGCGTTCGCAGCTGCCAACCTCCAATCAGATGATTTCGTCGGGATTTCATTCTGGTTGATCTCAATGGCCTTAATGGCTTCAACAGTGTTTTTCCTATGGGAAACACAAAGCGTCGATGGAAAGTGGAAAACATCATTAGTGGTATCGGCCCTCGTGACCTTTATTGCTGCTGTTCACTACTTCTACATGCGTGACGTTTGGATCGCGACTGGCGAAACTCCAACCGTTTACCGCTACATCGATTGGTTATTGACGGTCCCACTCTTGATGATTGAGTTCTTCTTGATCTTGAGAGCGATTGGTAACGCATCAGGTGGCATCTTCTGGCGCCTCCTCATCGGCACGCTCGTCATGCTCGTCCCGGGCTACATGGGTGAAGCCGGTTACATCAACGTCACCGTTGGCTTTGTCATTGGTATGCTTGGATGGTTCTACATTCTGTATGAAATCTTCGCAGGTGAAGCGGCACAAATGGCTGCAGAACAAGCACCTGAAGCAGTTCAGAGTGCATACGGCACAATGCGTTGGGTCGTGACAATCGGATGGGCGATTTACCCACTCGGTTATGCGCTTGGCTATTTCGTCTACGTTGACGACATGGGTAACACCACAGCAGCTGCAAGTGAAGCACTGAACATCGTGTACAACCTCGCTGACGTTGTGAACAAAATCGCCTTTGGCCTGTTGATTTGGTACGCAGCCACATCAACCAGCAAAGGGTCTGCTCCAGCAGCAGCC LFFFFRLQSRMTLTKLMKGLAPVGLLAALPSTAFAAANLQSDDFVGISFWLISMALMASTVFFLWETQSVDGKWKTSLVVSALVTFIAAVHYFYMRDVWIATGETPTVYRYIDWLLTVPLLMIEFFLILRAIGNASGGIFWRLLIGTLVMLVPGYMGEAGYINVTVGFVIGMLGWFYILYEIFAGEAAQMAAEQAPEAVQSAYGTMRWVVTIGWAIYPLGYALGYFVYVDDMGNTTAAASEALNIVYNLADVVNKIAFGLLIWYAATSTSKGSAPAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTTTTTTTTTTCAGGTTGCAGAGCAGAATGACACTAACAAAACTGATGAAGGGCCTTGCGCCCGTCGGCTTGCTTGCCGCGCTGCCATCAACAGCGTTCGCAGCTGCCAACCTCCAATCAGATGATTTCGTCGGGATTTCATTCTGGTTGATCTCAATGGCCTTAATGGCTTCAACAGTGTTTTTCCTATGGGAAACACAAAGCGTCGATGGA---AAGTGGAAAACATCATTAGTGGTATCGGCCCTCGTGACCTTTATTGCTGCTGTTCACTACTTCTACATGCGTGACGTTTGGATC------------------------------GCGACT---------------------GGCGAAACTCCAACCGTTTACCGCTACATCGATTGG------------------------TTATTGACGGTCCCACTCTTGATGATTGAGTTCTTCTTGATCTTGAGAGCG---------ATT---GGTAACGCATCAGGT---GGCATC------------------------------------TTCTGGCGC---CTCCTCATCGGCACGCTCGTCATGCTCGTCCCGGGCTACATGGGTGAA---------GCC------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGTC------------------ACCGTTGGC---TTTGTCATTGGTATGCTTGGATGGTTCTACATTCTGTATGAAATC---------------TTC------GCA---GGTGAAGCGGCACAAATGGCTGCAGAA------CAA---GCACCTGAAGCAGTT---CAG---AGT---GCA---TAC---GGC---ACAATG---CGTTGGGTCGTGACAATC---------------------------------------------------------------GGATGG---------GCGATTTACCCACTCGGTTATGCGCTTGGCTATTTCGTC---TACGTT---------GAC---GACATGGGTAACACCACAGCAGCTGCAAGTGAAGCACTGAACATCGTGTACAACCTCGCTGACGTTGTGAACAAAATCGCCTTTGGCCTGTTGATTTGGTACGCAGCCACATCAACC---AGCAAAGGGTCTGCTCCAGCAGCAGCC------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------LFFFFRLQSRMTLTKLMKGLAPVGLLAALPSTAFAAANLQSDDFVGISFWLISMALMASTVFFLWETQSVDG-KWKTSLVVSALVTFIAAVHYFYMRDVWI----------AT-------GETPTVYRYIDW--------LLTVPLLMIEFFLILRA---I-GNASG-GI------------FWR-LLIGTLVMLVPGYMGE---A------G--Y-----------I----------------------NV------TVG-FVIGMLGWFYILYEI-----F--A-GEAAQMAAE--Q-APEAV-Q-S-A-Y-G-TM-RWVVTI---------------------GW---AIYPLGYALGYFV-YV---D-DMGNTTAAASEALNIVYNLADVVNKIAFGLLIWYAATST-SKGSAPAAA-------------------------------- [III-Gamma4-Himb30]_KJ926126 [III-Gamma4-Himb30] BOUM_OTU039_env_samples gb|KJ926126| Uncultured bacterium clone BOUM OTU039 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU039 putative proteorhodopsin gene, partial cds KJ926126 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Himb30-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Himb30-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 33.7625 29.175833 #na #na #na #na #na GTAGATTGGTTATTGACGGTCCCACTCTTGATGATTGAGTTCTTCTTGATCTTGAGAGCGATTGGTAACGCATCAGGCGGCATCTTCTGGCGCCTCCTCATCGGCACGCTCGTTATGCTCGTCCCGGGCTATATGGGTGAAGCCGGTTACATCAACGTCACCGTTGGTTTCGTCATCGGTATGCTTGGATGGTTCTATATTCTGTATGAAATCTTCGCAGGTGAAGCAGCGCAAATGGCTGCAGAACAAGCGCCTGAAGCAGTCCAGAGTGCATATGGCACAATGCGTTGGGTCGTCACAATCGGCTGGGCCATTTAC VDWLLTVPLLMIEFFLILRAIGNASGGIFWRLLIGTLVMLVPGYMGEAGYINVTVGFVIGMLGWFYILYEIFAGEAAQMAAEQAPEAVQSAYGTMRWVVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGATTGG------------------------TTATTGACGGTCCCACTCTTGATGATTGAGTTCTTCTTGATCTTGAGAGCG---------ATT---GGTAACGCATCAGGC---GGCATC------------------------------------TTCTGGCGC---CTCCTCATCGGCACGCTCGTTATGCTCGTCCCGGGCTATATGGGTGAA---------GCC------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGTC------------------ACCGTTGGT---TTCGTCATCGGTATGCTTGGATGGTTCTATATTCTGTATGAAATC---------------TTC------GCA---GGTGAAGCAGCGCAAATGGCTGCAGAA------CAA---GCGCCTGAAGCAGTC---CAG---AGT---GCA---TAT---GGC---ACAATG---CGTTGGGTCGTCACAATC---------------------------------------------------------------GGCTGG---------GCCATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LLTVPLLMIEFFLILRA---I-GNASG-GI------------FWR-LLIGTLVMLVPGYMGE---A------G--Y-----------I----------------------NV------TVG-FVIGMLGWFYILYEI-----F--A-GEAAQMAAE--Q-APEAV-Q-S-A-Y-G-TM-RWVVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Gamma4-Himb30]_1112711828449 [III-Gamma4-Himb30] JCVI_ORF_1112711828449_GS121_Open_Ocean_2m jcvi|1112711828449| 1112711828449 JCVI ORF 1112711828449 1112711828449 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Himb30-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Himb30-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 29-sept-05 Open_Ocean/2m_depth/S_35.4_psu/GS121/International_water_between_Madagascar_and_South_Africa/Indian_Ocean Indian Ocean marine -29.348888 43.215557 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf CTGCTCGCCGCGCTGCCATCAACAGCGCTTGCGGCTGCCAACCTTCAATCAGATGATTTCGTAGGGATATCGTTCTGGTTGATTTCAATGGCCTTGATGGCCTCAACAGTGTTTTTCCTTTGGGAAACACAAAGCGTCGATGGGAAGTGGAAGACATCGTTAGTGGTATCGGCCCTCGTGACCTTTATCGCAGCGGTTCACTACTTCTACATGCGAGACGTTTGGATTACCACCGGTGAAACGCCGACCGTATATCGTTATATCGACTGGTTGTTGACCGTACCGCTCCTGATGATTGAGTTCTTCTTGATTCTCAGAGCAATAGGTAACGCGTCTGGTGGCATCTTCTGGCGCCTCCTCATTGGTACTCTCGTAATGCTTGTTCCCGGTTACATGGGTGAAGCAGGCTACATAAACGTGACCGTTGGTTTCGTGATCGGGATGCTGGGCTGGTTCTACATCCTGTATGAAATCTTCGCCGGTGAAGCTGCGCAAATGGCCGCAGAGCAAGCACCTGAAGCGGTCCAAAGTGCGTACGGGACCATGCGTATGGTTGTTACCGTCGGCTGGGCAATTTACCCACTGGGCTACGCCTTGGGCTACTTCGTCTACGTTGACGACATGGGCAATACCACTGCAGCAGCCAGTGAGGCTCTCAACATCGTCTACAACCTCGCTGACGTAGTTAACAAGATCGCATTTGGTCTGTTGATATGGTACGCAGCAACTTCAACTAGTAAAGCTACAGCGACAGCT LLAALPSTALAAANLQSDDFVGISFWLISMALMASTVFFLWETQSVDGKWKTSLVVSALVTFIAAVHYFYMRDVWITTGETPTVYRYIDWLLTVPLLMIEFFLILRAIGNASGGIFWRLLIGTLVMLVPGYMGEAGYINVTVGFVIGMLGWFYILYEIFAGEAAQMAAEQAPEAVQSAYGTMRMVVTVGWAIYPLGYALGYFVYVDDMGNTTAAASEALNIVYNLADVVNKIAFGLLIWYAATSTSKATATA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTCGCCGCGCTGCCATCAACAGCGCTTGCGGCTGCCAACCTTCAATCAGATGATTTCGTAGGGATATCGTTCTGGTTGATTTCAATGGCCTTGATGGCCTCAACAGTGTTTTTCCTTTGGGAAACACAAAGCGTCGATGGG---AAGTGGAAGACATCGTTAGTGGTATCGGCCCTCGTGACCTTTATCGCAGCGGTTCACTACTTCTACATGCGAGACGTTTGGATT------------------------------ACCACC---------------------GGTGAAACGCCGACCGTATATCGTTATATCGACTGG------------------------TTGTTGACCGTACCGCTCCTGATGATTGAGTTCTTCTTGATTCTCAGAGCA---------ATA---GGTAACGCGTCTGGT---GGCATC------------------------------------TTCTGGCGC---CTCCTCATTGGTACTCTCGTAATGCTTGTTCCCGGTTACATGGGTGAA---------GCA------------------GGC------TAC---------------------------------ATA------------------------------------------------------------------AACGTG------------------ACCGTTGGT---TTCGTGATCGGGATGCTGGGCTGGTTCTACATCCTGTATGAAATC---------------TTC------GCC---GGTGAAGCTGCGCAAATGGCCGCAGAG------CAA---GCACCTGAAGCGGTC---CAA---AGT---GCG---TAC---GGG---ACCATG---CGTATGGTTGTTACCGTC---------------------------------------------------------------GGCTGG---------GCAATTTACCCACTGGGCTACGCCTTGGGCTACTTCGTC---TACGTT---------GAC---GACATGGGCAATACCACTGCAGCAGCCAGTGAGGCTCTCAACATCGTCTACAACCTCGCTGACGTAGTTAACAAGATCGCATTTGGTCTGTTGATATGGTACGCAGCAACTTCAACT---AGTAAAGCTACAGCGACAGCT------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------------------LLAALPSTALAAANLQSDDFVGISFWLISMALMASTVFFLWETQSVDG-KWKTSLVVSALVTFIAAVHYFYMRDVWI----------TT-------GETPTVYRYIDW--------LLTVPLLMIEFFLILRA---I-GNASG-GI------------FWR-LLIGTLVMLVPGYMGE---A------G--Y-----------I----------------------NV------TVG-FVIGMLGWFYILYEI-----F--A-GEAAQMAAE--Q-APEAV-Q-S-A-Y-G-TM-RMVVTV---------------------GW---AIYPLGYALGYFV-YV---D-DMGNTTAAASEALNIVYNLADVVNKIAFGLLIWYAATST-SKATATA---------------------------------- [III-Gamma4-Himb30]_FJ618967 [III-Gamma4-Himb30] PR_108_08_23_env_samples_FJ618967 gi|223046817|gb|FJ618967| Uncultured bacterium clone PR 108 08 23 proteorhodopsin gene, partial cds Uncultured bacterium clone PR 108 08 23 proteorhodopsin gene, partial cds FJ618967 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Himb30-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Himb30-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-juil-09 #na Arctic_Ocean Arctic Ocean marine 71.37 -156.68 Photoheterotrophic microbes in the Arctic Ocean in summer and winter Cottrell,M.T. and Kirchman,D.L. Appl. Environ. Microbiol. 75 (15), 49584966 (2009) 19502441 #na TACATTGATTGGCTGTTAACCGTGCCACTCTTAATGATTGAATTCTTTTTGATTTTAAGAGCTATTGGCGCAGCCTCCGGCGGCATTTTCTGGCGCCTTCTTATTGGTACTCTTGTAATGCTTGTACCTGGTTTCTTGGGCGAAGCCGGATATATGGACAAAACTATTGGATTCGTAATTGGAATGCTCGGTTGGTTCTACATCCTTTACGAGATATTTGCAGGTGAAGCTGGCCAGATGGCGTCGGAAAAGGCGTCGCCAGCTGTTCAAAGTGCATACAACACAATGCGCTGGGTCGTAACGGTGGGCTGGGCGATTTAC YIDWLLTVPLLMIEFFLILRAIGAASGGIFWRLLIGTLVMLVPGFLGEAGYMDKTIGFVIGMLGWFYILYEIFAGEAGQMASEKASPAVQSAYNTMRWVVTVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACATTGATTGG------------------------CTGTTAACCGTGCCACTCTTAATGATTGAATTCTTTTTGATTTTAAGAGCT---------ATT---GGCGCAGCCTCCGGC---GGCATT------------------------------------TTCTGGCGC---CTTCTTATTGGTACTCTTGTAATGCTTGTACCTGGTTTCTTGGGCGAA---------GCC------------------GGA------TAT---------------------------------ATG------------------------------------------------------------------GACAAA------------------ACTATTGGA---TTCGTAATTGGAATGCTCGGTTGGTTCTACATCCTTTACGAGATA---------------TTT------GCA---GGTGAAGCTGGCCAGATGGCGTCGGAA------AAG---GCGTCGCCAGCTGTT---CAA---AGT---GCA---TAC---AAC---ACAATG---CGCTGGGTCGTAACGGTG---------------------------------------------------------------GGCTGG---------GCGATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YIDW--------LLTVPLLMIEFFLILRA---I-GAASG-GI------------FWR-LLIGTLVMLVPGFLGE---A------G--Y-----------M----------------------DK------TIG-FVIGMLGWFYILYEI-----F--A-GEAGQMASE--K-ASPAV-Q-S-A-Y-N-TM-RWVVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Gamma4-Himb30]_FJ618969 [III-Gamma4-Himb30] PR_707_07_02_env_samples_FJ618969 gi|223046821|gb|FJ618969| Uncultured bacterium clone PR 707 07 02 proteorhodopsin gene, partial cds Uncultured bacterium clone PR 707 07 02 proteorhodopsin gene, partial cds FJ618969 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Himb30-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Himb30-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-juil-09 #na Arctic_Ocean Arctic Ocean marine 71.37 -156.68 Photoheterotrophic microbes in the Arctic Ocean in summer and winter Cottrell,M.T. and Kirchman,D.L. Appl. Environ. Microbiol. 75 (15), 49584966 (2009) 19502441 #na TATATAGACTGGCTGTTAACCGTGCCACTCTTAATGATTGAATTCTTTTTGATTTTAAGAGCTATTGGCGCAGCCTCCGGCGGCATTTTCTGGCGCCTTCTTATTGGTACTCTTGTAATGCTTGTACCTGGTTTCTTGGGCGAAGCCGGATATATGGACAAAACTATTGGATTCGTAATTGGAATGCTCGGTTGGTTCTACATCCTTTACGAGATATTTGCAGGTGAAGCTGGCCAGATGGCGTCGGAAAAGGCGTCGCCAGCTGTTCAAAGTGCATACAACACAATGCGCTGGGTCGTAACGGTGGGTTGGGCCATCTAC YIDWLLTVPLLMIEFFLILRAIGAASGGIFWRLLIGTLVMLVPGFLGEAGYMDKTIGFVIGMLGWFYILYEIFAGEAGQMASEKASPAVQSAYNTMRWVVTVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATAGACTGG------------------------CTGTTAACCGTGCCACTCTTAATGATTGAATTCTTTTTGATTTTAAGAGCT---------ATT---GGCGCAGCCTCCGGC---GGCATT------------------------------------TTCTGGCGC---CTTCTTATTGGTACTCTTGTAATGCTTGTACCTGGTTTCTTGGGCGAA---------GCC------------------GGA------TAT---------------------------------ATG------------------------------------------------------------------GACAAA------------------ACTATTGGA---TTCGTAATTGGAATGCTCGGTTGGTTCTACATCCTTTACGAGATA---------------TTT------GCA---GGTGAAGCTGGCCAGATGGCGTCGGAA------AAG---GCGTCGCCAGCTGTT---CAA---AGT---GCA---TAC---AAC---ACAATG---CGCTGGGTCGTAACGGTG---------------------------------------------------------------GGTTGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YIDW--------LLTVPLLMIEFFLILRA---I-GAASG-GI------------FWR-LLIGTLVMLVPGFLGE---A------G--Y-----------M----------------------DK------TIG-FVIGMLGWFYILYEI-----F--A-GEAGQMASE--K-ASPAV-Q-S-A-Y-N-TM-RWVVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Gamma4-Himb30]_JX863203 [III-Gamma4-Himb30] MALINA_OTU51_473_L_env_samples_JX863203 gi|425477356|gb|JX863203| Uncultured bacterium clone MALINA OTU51 473 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU51 473 L putative proteorhodopsin gene, partial cds JX863203 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Himb30-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Himb30-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 13Aug2009 0m_depth Arctic Ocean marine 69.25 -137.2 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGTTAACCGTGCCACTCTTAATGATTGAATTCTTTTTGATTTTAAGAGCCATTGGCGCAGCCTCCGGCGGCATTTTCTGGCGCCTTCTTATTGGTACTCTTGTAATGCTTGTACCTGGTTTCTTGGGCGAAGCCGGATATATGGACAAAACTATTGGATTCGTAATTGGAATGCTCGGTTGGTTCTACATCCTTTACGAGATATTTGCAGGTGAAGCTGGCCAGATGGCGTCGGAAAAGGCGTCGCCAGCTGTTCAAAGTGCATACAACACAATGCGCTGGGTCGTAACGGTG WLLTVPLLMIEFFLILRAIGAASGGIFWRLLIGTLVMLVPGFLGEAGYMDKTIGFVIGMLGWFYILYEIFAGEAGQMASEKASPAVQSAYNTMRWVVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGTTAACCGTGCCACTCTTAATGATTGAATTCTTTTTGATTTTAAGAGCC---------ATT---GGCGCAGCCTCCGGC---GGCATT------------------------------------TTCTGGCGC---CTTCTTATTGGTACTCTTGTAATGCTTGTACCTGGTTTCTTGGGCGAA---------GCC------------------GGA------TAT---------------------------------ATG------------------------------------------------------------------GACAAA------------------ACTATTGGA---TTCGTAATTGGAATGCTCGGTTGGTTCTACATCCTTTACGAGATA---------------TTT------GCA---GGTGAAGCTGGCCAGATGGCGTCGGAA------AAG---GCGTCGCCAGCTGTT---CAA---AGT---GCA---TAC---AAC---ACAATG---CGCTGGGTCGTAACGGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLMIEFFLILRA---I-GAASG-GI------------FWR-LLIGTLVMLVPGFLGE---A------G--Y-----------M----------------------DK------TIG-FVIGMLGWFYILYEI-----F--A-GEAGQMASE--K-ASPAV-Q-S-A-Y-N-TM-RWVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-Himb30]_JX863325 [III-Gamma4-Himb30] MALINA_OTU51_339_L_env_samples_JX863325 gi|425477600|gb|JX863325| Uncultured bacterium clone MALINA OTU51 339 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU51 339 L putative proteorhodopsin mRNA, partial cds JX863325 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Himb30-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Himb30-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 02Aug2009 3m_depth Arctic Ocean marine 69.61 -138.23 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGTTAACCGTGCCACTCTTAATGATTGAATTCTTTTTGATTTTAAGAGCTATTGGCGCAGCCTCCGGCGGCGTTTTCTGGCGCCTTCTTATTGGTACTCTTGTAATGCTTGTACCTGGTTTCTTGGGCGAAGCCGGATATATGGACAAAACTATTGGATTCGTAATTGGAATGCTCGGTTGGTTCTACATCCTTTACGAGATATTTGCAGGTGAAGCTGGCCAGATGGCGTCGGAAAAGGCGTCGCCAGCTGTTCAAAGTGCATACAACACAATGCGCTGGGTCGTAACGGTG WLLTVPLLMIEFFLILRAIGAASGGVFWRLLIGTLVMLVPGFLGEAGYMDKTIGFVIGMLGWFYILYEIFAGEAGQMASEKASPAVQSAYNTMRWVVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGTTAACCGTGCCACTCTTAATGATTGAATTCTTTTTGATTTTAAGAGCT---------ATT---GGCGCAGCCTCCGGC---GGCGTT------------------------------------TTCTGGCGC---CTTCTTATTGGTACTCTTGTAATGCTTGTACCTGGTTTCTTGGGCGAA---------GCC------------------GGA------TAT---------------------------------ATG------------------------------------------------------------------GACAAA------------------ACTATTGGA---TTCGTAATTGGAATGCTCGGTTGGTTCTACATCCTTTACGAGATA---------------TTT------GCA---GGTGAAGCTGGCCAGATGGCGTCGGAA------AAG---GCGTCGCCAGCTGTT---CAA---AGT---GCA---TAC---AAC---ACAATG---CGCTGGGTCGTAACGGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLMIEFFLILRA---I-GAASG-GV------------FWR-LLIGTLVMLVPGFLGE---A------G--Y-----------M----------------------DK------TIG-FVIGMLGWFYILYEI-----F--A-GEAGQMASE--K-ASPAV-Q-S-A-Y-N-TM-RWVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-Himb30]_NZ_AGIG01000028 [III-Gamma4-Himb30] 383282345_186675_187478_Gammaproteobacterium_HIMB30_contig00029_WGS gi|383282345|gb|NZ_AGIG01000028| Gamma proteobacterium HIMB30 contig00029, whole genome shotgun sequence Gamma proteobacterium HIMB30 contig00029, whole genome shotgun sequence NZ_AGIG01000028 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Himb30-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Himb30-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Gammaproteobacteria] taxon:751994 genomic_DNA strain 12-May-2013 #na #na Pacific Ocean marine 21.460467 -157.787657 #na #na #na #na #na ATGACATTTACAAAACTGATAAAGGGCCTCGCGCCCGTCGGCTTGCTCGCTGCGCTGCCATCAACAGCGTTTGCGGCTGCCAACCTCCAATCAGATGATTTCGTTGGGATTTCATTCTGGTTGATTTCAATGGCCTTAATGGCTTCAACCGTGTTCTTCCTTTGGGAAACACAAAGCGTCGATGGGAAATGGAAAACATCGCTAGTAGTATCGGCCCTCGTGACCTTTATTGCTGCTGTTCACTATTTCTACATGCGGGATGTTTGGATTTCGACTGGTGAAACGCCAACCGTCTACCGTTACATTGACTGGTTGTTGACCGTTCCACTCTTGATGATCGAGTTCTTCTTGATCCTAAGAGCAATTGGCAACGCGTCTGGCGGCATTTTCTGGCGCCTCCTCATTGGTACTCTCATCATGCTGGTACCAGGCTACATGGGTGAAGCGGGTTACATCAACGTAACTGTAGGCTTCGTAATCGGTATGCTCGGATGGTTCTACATCCTGTACGAAATCTTTGCTGGCGAAGCTGCGAAGATGGCGGCAGATCAAGCACCACCAGCAGTACAGAGTGCGTACGGCACAATGCGTATGGTTGTTACGATCGGTTGGGCGATTTACCCACTCGGTTATGTCCTTGGCTACTTTGTGTATGTCGACGACATGGGCAACACTACAGCGGCAGCTAGTGAAGCACTTAACATCGTCTACAACCTTGCTGACGTGGTTAACAAGATCGCATTCGGTCTGTTGATCTGGTACGCAGCGACATCAACAAGCAAGGCGTCGGCAGCGACAGCC MTFTKLIKGLAPVGLLAALPSTAFAAANLQSDDFVGISFWLISMALMASTVFFLWETQSVDGKWKTSLVVSALVTFIAAVHYFYMRDVWISTGETPTVYRYIDWLLTVPLLMIEFFLILRAIGNASGGIFWRLLIGTLIMLVPGYMGEAGYINVTVGFVIGMLGWFYILYEIFAGEAAKMAADQAPPAVQSAYGTMRMVVTIGWAIYPLGYVLGYFVYVDDMGNTTAAASEALNIVYNLADVVNKIAFGLLIWYAATSTSKASAATA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGACATTTACAAAACTGATAAAGGGCCTCGCGCCCGTCGGCTTGCTCGCTGCGCTGCCATCAACAGCGTTTGCGGCTGCCAACCTCCAATCAGATGATTTCGTTGGGATTTCATTCTGGTTGATTTCAATGGCCTTAATGGCTTCAACCGTGTTCTTCCTTTGGGAAACACAAAGCGTCGATGGG---AAATGGAAAACATCGCTAGTAGTATCGGCCCTCGTGACCTTTATTGCTGCTGTTCACTATTTCTACATGCGGGATGTTTGGATT------------------------------TCGACT---------------------GGTGAAACGCCAACCGTCTACCGTTACATTGACTGG------------------------TTGTTGACCGTTCCACTCTTGATGATCGAGTTCTTCTTGATCCTAAGAGCA---------ATT---GGCAACGCGTCTGGC---GGCATT------------------------------------TTCTGGCGC---CTCCTCATTGGTACTCTCATCATGCTGGTACCAGGCTACATGGGTGAA---------GCG------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGTA------------------ACTGTAGGC---TTCGTAATCGGTATGCTCGGATGGTTCTACATCCTGTACGAAATC---------------TTT------GCT---GGCGAAGCTGCGAAGATGGCGGCAGAT------CAA---GCACCACCAGCAGTA---CAG---AGT---GCG---TAC---GGC---ACAATG---CGTATGGTTGTTACGATC---------------------------------------------------------------GGTTGG---------GCGATTTACCCACTCGGTTATGTCCTTGGCTACTTTGTG---TATGTC---------GAC---GACATGGGCAACACTACAGCGGCAGCTAGTGAAGCACTTAACATCGTCTACAACCTTGCTGACGTGGTTAACAAGATCGCATTCGGTCTGTTGATCTGGTACGCAGCGACATCAACA---AGCAAGGCGTCGGCAGCGACAGCC--------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MTFTKLIKGLAPVGLLAALPSTAFAAANLQSDDFVGISFWLISMALMASTVFFLWETQSVDG-KWKTSLVVSALVTFIAAVHYFYMRDVWI----------ST-------GETPTVYRYIDW--------LLTVPLLMIEFFLILRA---I-GNASG-GI------------FWR-LLIGTLIMLVPGYMGE---A------G--Y-----------I----------------------NV------TVG-FVIGMLGWFYILYEI-----F--A-GEAAKMAAD--Q-APPAV-Q-S-A-Y-G-TM-RMVVTI---------------------GW---AIYPLGYVLGYFV-YV---D-DMGNTTAAASEALNIVYNLADVVNKIAFGLLIWYAATST-SKASAATA--------------------------------- [III-Gamma4-b]_DQ203363 [III-Gamma4-b] MedHO102C1_env_samples_DQ203363 gi|77547174|gb|DQ203363| Uncultured bacterium clone MedHO102C1 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102C1 predicted proteorhodopsin gene, partial cds DQ203363 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGATTGGCTACTCACAGTACCTTTACTCATGATCGAATTCTTCTTGATTCTGCGTGCCATTGGTAACGCATCAGGTGGAATCTTCTGGCGCCTCCTAATCGGCACCTTGGTCATGTTGGTTCCTGGGTATCTCGCTGAAGCCGGTTATATTAGTACAACCCTTGGATTTATTGTTGGTATGCTGGGTTGGTTCTATATCTTGTATGAAATCTTCGCTGGTGAAGCAGGTCAAATGGCTGCCAAAGAAGCATCTCAAGCAGTACAGAGCTCGTATAACTCAATGCGTTGGATTGTGACTATTGGTTGGGCCATCTATCCA SYIDWLLTVPLLMIEFFLILRAIGNASGGIFWRLLIGTLVMLVPGYLAEAGYISTTLGFIVGMLGWFYILYEIFAGEAGQMAAKEASQAVQSSYNSMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGATTGG------------------------CTACTCACAGTACCTTTACTCATGATCGAATTCTTCTTGATTCTGCGTGCC---------ATT---GGTAACGCATCAGGT---GGAATC------------------------------------TTCTGGCGC---CTCCTAATCGGCACCTTGGTCATGTTGGTTCCTGGGTATCTCGCTGAA---------GCC------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------AGTACA------------------ACCCTTGGA---TTTATTGTTGGTATGCTGGGTTGGTTCTATATCTTGTATGAAATC---------------TTC------GCT---GGTGAAGCAGGTCAAATGGCTGCCAAA------GAA---GCATCTCAAGCAGTA---CAG---AGC---TCG---TAT---AAC---TCAATG---CGTTGGATTGTGACTATT---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LLTVPLLMIEFFLILRA---I-GNASG-GI------------FWR-LLIGTLVMLVPGYLAE---A------G--Y-----------I----------------------ST------TLG-FIVGMLGWFYILYEI-----F--A-GEAGQMAAK--E-ASQAV-Q-S-S-Y-N-SM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-b]_DQ203495 [III-Gamma4-b] MedHO1202A2_env_samples_DQ203495 gi|77547438|gb|DQ203495| Uncultured bacterium clone MedHO1202A2 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202A2 predicted proteorhodopsin gene, partial cds DQ203495 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGATTGGCTACTCACAGTACCTTTACTCATGATCGAATTCTTCTTGATTCTGCGTGCCATTGGTAACGCATCAGGTGGAATCTTCTGGCGCCTCCTAATCGGCACCTTGGTCATGTTGGTTCCTGGGTATCTCGCTGAAGCCGGTTATATTAGTACAACCCTTGGATTTATTGTTGGTATGCTGGGTTGGTTCTATATCTTGTATGAAATCTTCGCTGGTGAAGCAGGTCAAATGGCTGCCAAAGAAGCATCTCAAGCAGTACAGAGCTCGTATAACTCAATGCGTTGGATTGTGACTATTGGTTGGGCCATCTATCCA SYIDWLLTVPLLMIEFFLILRAIGNASGGIFWRLLIGTLVMLVPGYLAEAGYISTTLGFIVGMLGWFYILYEIFAGEAGQMAAKEASQAVQSSYNSMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGATTGG------------------------CTACTCACAGTACCTTTACTCATGATCGAATTCTTCTTGATTCTGCGTGCC---------ATT---GGTAACGCATCAGGT---GGAATC------------------------------------TTCTGGCGC---CTCCTAATCGGCACCTTGGTCATGTTGGTTCCTGGGTATCTCGCTGAA---------GCC------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------AGTACA------------------ACCCTTGGA---TTTATTGTTGGTATGCTGGGTTGGTTCTATATCTTGTATGAAATC---------------TTC------GCT---GGTGAAGCAGGTCAAATGGCTGCCAAA------GAA---GCATCTCAAGCAGTA---CAG---AGC---TCG---TAT---AAC---TCAATG---CGTTGGATTGTGACTATT---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LLTVPLLMIEFFLILRA---I-GNASG-GI------------FWR-LLIGTLVMLVPGYLAE---A------G--Y-----------I----------------------ST------TLG-FIVGMLGWFYILYEI-----F--A-GEAGQMAAK--E-ASQAV-Q-S-S-Y-N-SM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-b]_DQ203342 [III-Gamma4-b] MedHO102A1_env_samples_DQ203342 gi|77547132|gb|DQ203342| Uncultured bacterium clone MedHO102A1 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102A1 predicted proteorhodopsin gene, partial cds DQ203342 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATACATTGATTGGCTACTCACAGTACCTTTACTCATGATCGAATTCTTCTTGATTCTGCGTGCCATTGGTAACGCATCAGGTGGAATCTTCTGGCGCCTCCTAATCGGCACCTTGGTCATGTTGGTTCCTGGGTATCTCGCTGAAGCCGGTTATATTAGTACAACCCTTGGATTTATTGTTGGTATGCTGGGTTGGTTCTATATCTTGTATGAAATCTTCGCTGGTGAAGCAGGTCAAATGGCTGCCAAAGAAGCATCTCAAGCAGTACAGAGCTCGTATAACTCAATGCGTTGGATTGTGACTATTGGGTGGGCAATCTATCCA RYIDWLLTVPLLMIEFFLILRAIGNASGGIFWRLLIGTLVMLVPGYLAEAGYISTTLGFIVGMLGWFYILYEIFAGEAGQMAAKEASQAVQSSYNSMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATTGATTGG------------------------CTACTCACAGTACCTTTACTCATGATCGAATTCTTCTTGATTCTGCGTGCC---------ATT---GGTAACGCATCAGGT---GGAATC------------------------------------TTCTGGCGC---CTCCTAATCGGCACCTTGGTCATGTTGGTTCCTGGGTATCTCGCTGAA---------GCC------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------AGTACA------------------ACCCTTGGA---TTTATTGTTGGTATGCTGGGTTGGTTCTATATCTTGTATGAAATC---------------TTC------GCT---GGTGAAGCAGGTCAAATGGCTGCCAAA------GAA---GCATCTCAAGCAGTA---CAG---AGC---TCG---TAT---AAC---TCAATG---CGTTGGATTGTGACTATT---------------------------------------------------------------GGGTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFFLILRA---I-GNASG-GI------------FWR-LLIGTLVMLVPGYLAE---A------G--Y-----------I----------------------ST------TLG-FIVGMLGWFYILYEI-----F--A-GEAGQMAAK--E-ASQAV-Q-S-S-Y-N-SM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-b]_DQ203514 [III-Gamma4-b] MedHO1202B9_env_samples_DQ203514 gi|77547476|gb|DQ203514| Uncultured bacterium clone MedHO1202B9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202B9 predicted proteorhodopsin gene, partial cds DQ203514 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATACATTGATTGGCTACTCACAGTACCTTTACTCATGATCGAATTCTTCTTGATTCTGCGTGCCATTGGTAACGCATCAGGTGGAATCTTCTGGCGCCTCCTAATCGGCACCTTGGTCATGTTGGTTCCTGGGTATCTCGCTGAAGCCGGTTATATTAGTACAACCCTTGGATTTATTGTTGGTATGCTGGGTTGGTTCTATATCTTGTATGAAATCTTCGCTGGTGAAGCAGGTCAAATGGCTGCCAAAGAAGCATCTCAAGCAGTACAGAGCTCGTATAACTCAATGCGTTGGATTGTGACTATTGGTTGGGCAATCTACCCA RYIDWLLTVPLLMIEFFLILRAIGNASGGIFWRLLIGTLVMLVPGYLAEAGYISTTLGFIVGMLGWFYILYEIFAGEAGQMAAKEASQAVQSSYNSMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATTGATTGG------------------------CTACTCACAGTACCTTTACTCATGATCGAATTCTTCTTGATTCTGCGTGCC---------ATT---GGTAACGCATCAGGT---GGAATC------------------------------------TTCTGGCGC---CTCCTAATCGGCACCTTGGTCATGTTGGTTCCTGGGTATCTCGCTGAA---------GCC------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------AGTACA------------------ACCCTTGGA---TTTATTGTTGGTATGCTGGGTTGGTTCTATATCTTGTATGAAATC---------------TTC------GCT---GGTGAAGCAGGTCAAATGGCTGCCAAA------GAA---GCATCTCAAGCAGTA---CAG---AGC---TCG---TAT---AAC---TCAATG---CGTTGGATTGTGACTATT---------------------------------------------------------------GGTTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFFLILRA---I-GNASG-GI------------FWR-LLIGTLVMLVPGYLAE---A------G--Y-----------I----------------------ST------TLG-FIVGMLGWFYILYEI-----F--A-GEAGQMAAK--E-ASQAV-Q-S-S-Y-N-SM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-b]_DQ203573 [III-Gamma4-b] MedHO1202H12_env_samples_DQ203573 gi|77547594|gb|DQ203573| Uncultured bacterium clone MedHO1202H12 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202H12 predicted proteorhodopsin gene, partial cds DQ203573 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATACATTGATTGGCTACTCACAGTACCTTTACTCATGATCGAATTCTTCTTGATTCTGCGTGCCATTGGTAACGCATCAGGTGGAATCTTCTGGCGCCTCCTAATCGGCACCTTGGTCATGTTGGTTCCTGGGTATCTCGCTGAAGCCGGTTATATTAGTACAACCCTTGGATTTATTGTTGGTATGCTGGGTTGGTTCTATATCTTGTATGAAATCTTCGCTGGTGAAGCAGGTCAAATGGCTGCCAAAGAAGCATCTCAAGCAGTACAGAGCTCGTATAACTCAATGCGTTGGATTGTGACTATTGGTTGGGCAATCTACCCA RYIDWLLTVPLLMIEFFLILRAIGNASGGIFWRLLIGTLVMLVPGYLAEAGYISTTLGFIVGMLGWFYILYEIFAGEAGQMAAKEASQAVQSSYNSMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATTGATTGG------------------------CTACTCACAGTACCTTTACTCATGATCGAATTCTTCTTGATTCTGCGTGCC---------ATT---GGTAACGCATCAGGT---GGAATC------------------------------------TTCTGGCGC---CTCCTAATCGGCACCTTGGTCATGTTGGTTCCTGGGTATCTCGCTGAA---------GCC------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------AGTACA------------------ACCCTTGGA---TTTATTGTTGGTATGCTGGGTTGGTTCTATATCTTGTATGAAATC---------------TTC------GCT---GGTGAAGCAGGTCAAATGGCTGCCAAA------GAA---GCATCTCAAGCAGTA---CAG---AGC---TCG---TAT---AAC---TCAATG---CGTTGGATTGTGACTATT---------------------------------------------------------------GGTTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFFLILRA---I-GNASG-GI------------FWR-LLIGTLVMLVPGYLAE---A------G--Y-----------I----------------------ST------TLG-FIVGMLGWFYILYEI-----F--A-GEAGQMAAK--E-ASQAV-Q-S-S-Y-N-SM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-b]_DQ203526 [III-Gamma4-b] MedHO1202D1_env_samples_DQ203526 gi|77547500|gb|DQ203526| Uncultured bacterium clone MedHO1202D1 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202D1 predicted proteorhodopsin gene, partial cds DQ203526 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTACATTGATTGGCTACTCACAGTACCTTTACTCATGATCGAATTCTTCTTGATTCTGCGTGCCATTGGTAACGCATCAGGTGGAATCTTCTGGCGCCTCCTAATCGGCACCTTGGTCATGTTGGTTCCTGGGTATCTCGCTGAAGCCGGTTATATTAATACAACCCTTGGATTTATTGTTGGTATGCTGGGTTGGTTCTATATCTTGTATGAAATCTTCGCTGGTGAAGCAGGTCAAATGGCTGCCAAAGAAGCATCTCAGGCAGTACAGAGCTCGCATAACTCAATGCGTTGGATTGTGACTATTGGTTGGGCGATATACCTA RYIDWLLTVPLLMIEFFLILRAIGNASGGIFWRLLIGTLVMLVPGYLAEAGYINTTLGFIVGMLGWFYILYEIFAGEAGQMAAKEASQAVQSSHNSMRWIVTIGWAIYL ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATTGATTGG------------------------CTACTCACAGTACCTTTACTCATGATCGAATTCTTCTTGATTCTGCGTGCC---------ATT---GGTAACGCATCAGGT---GGAATC------------------------------------TTCTGGCGC---CTCCTAATCGGCACCTTGGTCATGTTGGTTCCTGGGTATCTCGCTGAA---------GCC------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------AATACA------------------ACCCTTGGA---TTTATTGTTGGTATGCTGGGTTGGTTCTATATCTTGTATGAAATC---------------TTC------GCT---GGTGAAGCAGGTCAAATGGCTGCCAAA------GAA---GCATCTCAGGCAGTA---CAG---AGC---TCG---CAT---AAC---TCAATG---CGTTGGATTGTGACTATT---------------------------------------------------------------GGTTGG---------GCGATATACCTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFFLILRA---I-GNASG-GI------------FWR-LLIGTLVMLVPGYLAE---A------G--Y-----------I----------------------NT------TLG-FIVGMLGWFYILYEI-----F--A-GEAGQMAAK--E-ASQAV-Q-S-S-H-N-SM-RWIVTI---------------------GW---AIYL-------------------------------------------------------------------------------------------------- [III-Gamma4-b]_DQ903153 [III-Gamma4-b] clone_HB10009_DQ903153 gi|116294035|gb|DQ903153| Uncultured bacterium clone HB10009 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone HB10009 putative proteorhodopsin gene, partial cds. DQ903153 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na East China Sea surface water (ECS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na ATGGTGGCCGCTACTGTTTTCTTCTTGTGGGAAACTCAAAGTGTAGACGGCAAGTGGAAGACTTCTCTTGTTGTATCTGCATTAGTTACTTTCATCGCTGCAGTGCATTATTTCTACATGCGTGATGTTTGGATTTCTACAGGTGAAACACCAACGGTCTATCGCTACATTGATTGGCTACTCACAGTACCTTTACTCATGATCGAATTCTTCTTGATTCTGCGTGCCATTGGTAACGCATCAGGTGGAATCTTCTGGCGCCTCCTAATCGGCACCTTGGTCATGTTGGTTCCTGGGTATCTCGCTGAAGCCGGTTATATTAGTACAACCCTTGGATTTATTGTTGGTATGCTGGGTTGGTTCTATATCTTGTATGAAATCTTCGCTGGTGAAGCAGGTCAAATGGCTGCCAAAGAAGCATCTCAAGCAGTACAGAGCTCGTATAACTCAATGCGTTGGATTGTGACTATTGGTTGGGCGATCTACCCA MVAATVFFLWETQSVDGKWKTSLVVSALVTFIAAVHYFYMRDVWISTGETPTVYRYIDWLLTVPLLMIEFFLILRAIGNASGGIFWRLLIGTLVMLVPGYLAEAGYISTTLGFIVGMLGWFYILYEIFAGEAGQMAAKEASQAVQSSYNSMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTTTTCTTCTTGTGGGAAACTCAAAGTGTAGACGGC---AAGTGGAAGACTTCTCTTGTTGTATCTGCATTAGTTACTTTCATCGCTGCAGTGCATTATTTCTACATGCGTGATGTTTGGATT------------------------------TCTACA---------------------GGTGAAACACCAACGGTCTATCGCTACATTGATTGG------------------------CTACTCACAGTACCTTTACTCATGATCGAATTCTTCTTGATTCTGCGTGCC---------ATT---GGTAACGCATCAGGT---GGAATC------------------------------------TTCTGGCGC---CTCCTAATCGGCACCTTGGTCATGTTGGTTCCTGGGTATCTCGCTGAA---------GCC------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------AGTACA------------------ACCCTTGGA---TTTATTGTTGGTATGCTGGGTTGGTTCTATATCTTGTATGAAATC---------------TTC------GCT---GGTGAAGCAGGTCAAATGGCTGCCAAA------GAA---GCATCTCAAGCAGTA---CAG---AGC---TCG---TAT---AAC---TCAATG---CGTTGGATTGTGACTATT---------------------------------------------------------------GGTTGG---------GCGATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFLWETQSVDG-KWKTSLVVSALVTFIAAVHYFYMRDVWI----------ST-------GETPTVYRYIDW--------LLTVPLLMIEFFLILRA---I-GNASG-GI------------FWR-LLIGTLVMLVPGYLAE---A------G--Y-----------I----------------------ST------TLG-FIVGMLGWFYILYEI-----F--A-GEAGQMAAK--E-ASQAV-Q-S-S-Y-N-SM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-b]_DQ903157 [III-Gamma4-b] clone_HB10017_DQ903157 gi|116294043|gb|DQ903157| Uncultured bacterium clone HB10017 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone HB10017 putative proteorhodopsin gene, partial cds. DQ903157 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na East China Sea surface water (ECS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na ATGGTTGCCGCTACTGTATTCTTCTTGTGGGAAACTCAAAGTGTAGACGGCAAGTGGAAGACTTCTCTTGTTGTATCTGCATTAGTTACTTTCATCGCTGCAGTGCATTATTTCTACATGCGTGATGTTTGGATTTCTACAGGTGAAACACCAACGGTCTATCGCTACATTGATTGGCTACTCACAGTACCTTTACTCATGATCGAATTCTTCTTGATTCTGCGTGCCATTGGTAACGCATCAGGTGGAATCTTCTGGCGCCTCCTAATCGGCACCTTGGTCATGTTGGTTCCTGGGTATCTCGCTGAAGCCGGTTATATTAGTACAACCCTTGGATTTATTGTTGGTATGCTGGGTTGGTTCTATATCTTGTATGAAATCTTCGCTGGTGAAGCAGGTCAAATGGCTGCCAAAGAAGCATCTCAAGCGGTACAGAGCTCGTATAACTCAATGCGTTGGATTGTGACTATTGGTTGGGCGATTTACCCA MVAATVFFLWETQSVDGKWKTSLVVSALVTFIAAVHYFYMRDVWISTGETPTVYRYIDWLLTVPLLMIEFFLILRAIGNASGGIFWRLLIGTLVMLVPGYLAEAGYISTTLGFIVGMLGWFYILYEIFAGEAGQMAAKEASQAVQSSYNSMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTATTCTTCTTGTGGGAAACTCAAAGTGTAGACGGC---AAGTGGAAGACTTCTCTTGTTGTATCTGCATTAGTTACTTTCATCGCTGCAGTGCATTATTTCTACATGCGTGATGTTTGGATT------------------------------TCTACA---------------------GGTGAAACACCAACGGTCTATCGCTACATTGATTGG------------------------CTACTCACAGTACCTTTACTCATGATCGAATTCTTCTTGATTCTGCGTGCC---------ATT---GGTAACGCATCAGGT---GGAATC------------------------------------TTCTGGCGC---CTCCTAATCGGCACCTTGGTCATGTTGGTTCCTGGGTATCTCGCTGAA---------GCC------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------AGTACA------------------ACCCTTGGA---TTTATTGTTGGTATGCTGGGTTGGTTCTATATCTTGTATGAAATC---------------TTC------GCT---GGTGAAGCAGGTCAAATGGCTGCCAAA------GAA---GCATCTCAAGCGGTA---CAG---AGC---TCG---TAT---AAC---TCAATG---CGTTGGATTGTGACTATT---------------------------------------------------------------GGTTGG---------GCGATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFLWETQSVDG-KWKTSLVVSALVTFIAAVHYFYMRDVWI----------ST-------GETPTVYRYIDW--------LLTVPLLMIEFFLILRA---I-GNASG-GI------------FWR-LLIGTLVMLVPGYLAE---A------G--Y-----------I----------------------ST------TLG-FIVGMLGWFYILYEI-----F--A-GEAGQMAAK--E-ASQAV-Q-S-S-Y-N-SM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-b]_DQ903171 [III-Gamma4-b] clone_HB10088_DQ903171 gi|116294071|gb|DQ903171| Uncultured bacterium clone HB10088 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone HB10088 putative proteorhodopsin gene, partial cds. DQ903171 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na East China Sea surface water (ECS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na ATGGTGGCCGCTACTGCCTTCTTCTTGTGGGAAACTCAAAGTGTAGACGGCAAGTGGAAGACTTCTCTTGTTGTATCTGCATTAGTTACTTTCATCGCTGCAGTGCATTATTTCTACATGCGTGATGTTTGGATTTCTACAGGTGAAACACCAACGGTCTATCGCTACATTGATTGGCTACTCACAGTACCTTTACTCATGATCGAATTCTTCTTGATTCTGCGTGCCATTGGTAACGCATCAGGTGGAATCTTCTGGCGCCTCCTAATCGGCACCTTGGTCATGTTGGTTCCTGGGTATCTCGCTGAAGCCGGTTATATTAGTACAACCCTTGGATTTATTGTTGGTATGCTGGGTTGGTTCTATATCTTGTATGAAATCTTCGCTGGTGAAGCAGGTCAAATGGCTGCCAAAGAAGCATCTCAAGCAGTACAGAGCTCGTATAACTCAATGCGTTGGATTGTGACTATTGGTTGGGCTATCTACCCA MVAATAFFLWETQSVDGKWKTSLVVSALVTFIAAVHYFYMRDVWISTGETPTVYRYIDWLLTVPLLMIEFFLILRAIGNASGGIFWRLLIGTLVMLVPGYLAEAGYISTTLGFIVGMLGWFYILYEIFAGEAGQMAAKEASQAVQSSYNSMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCCTTCTTCTTGTGGGAAACTCAAAGTGTAGACGGC---AAGTGGAAGACTTCTCTTGTTGTATCTGCATTAGTTACTTTCATCGCTGCAGTGCATTATTTCTACATGCGTGATGTTTGGATT------------------------------TCTACA---------------------GGTGAAACACCAACGGTCTATCGCTACATTGATTGG------------------------CTACTCACAGTACCTTTACTCATGATCGAATTCTTCTTGATTCTGCGTGCC---------ATT---GGTAACGCATCAGGT---GGAATC------------------------------------TTCTGGCGC---CTCCTAATCGGCACCTTGGTCATGTTGGTTCCTGGGTATCTCGCTGAA---------GCC------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------AGTACA------------------ACCCTTGGA---TTTATTGTTGGTATGCTGGGTTGGTTCTATATCTTGTATGAAATC---------------TTC------GCT---GGTGAAGCAGGTCAAATGGCTGCCAAA------GAA---GCATCTCAAGCAGTA---CAG---AGC---TCG---TAT---AAC---TCAATG---CGTTGGATTGTGACTATT---------------------------------------------------------------GGTTGG---------GCTATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFLWETQSVDG-KWKTSLVVSALVTFIAAVHYFYMRDVWI----------ST-------GETPTVYRYIDW--------LLTVPLLMIEFFLILRA---I-GNASG-GI------------FWR-LLIGTLVMLVPGYLAE---A------G--Y-----------I----------------------ST------TLG-FIVGMLGWFYILYEI-----F--A-GEAGQMAAK--E-ASQAV-Q-S-S-Y-N-SM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-b]_DQ903159 [III-Gamma4-b] clone_HB10031_DQ903159 gi|116294047|gb|DQ903159| Uncultured bacterium clone HB10031 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone HB10031 putative proteorhodopsin gene, partial cds. DQ903159 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na East China Sea surface water (ECS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na ATGGTGGCCGCTACTGTATTCTTCTTGTGGGAAACTCAAAGTGTAGACGGCAAGTGGAAGACTTCTCTTGTTGTATCTGCATTAGTTACTTTCATCGCTGCAGTGCATTATTTCTACATGCGTGATGTTTGGATTTCTACAGGTGAAACACCAACGGTCTATCGCTACATTGATTGGCTACTCACAGTACCTTTACTCATGATCGAATTCTTCTTGATTCTGCGTGCCATTGGTAACGCATCAGGTGGAATCTTCTGGCGCCTCCTAATCGGCACCTTGGTCATGTTGGTTCCTGGGTATCCCGCTGAAGCCGGTTATATTAGTACAACCCTTGGATTTATTGTTGGTATGCTGGGTTGGTTCTATATCTTGTATGAAATCTTCGCTGGTGAAGCAGGTCAAATGGCTGCCAAAGAAGCATCTCAAGCAGTACAGAGCTCGTATAACTCAATGCGTTGGATTGTGACTATTGGGTGGGCGATCTACCCA MVAATVFFLWETQSVDGKWKTSLVVSALVTFIAAVHYFYMRDVWISTGETPTVYRYIDWLLTVPLLMIEFFLILRAIGNASGGIFWRLLIGTLVMLVPGYPAEAGYISTTLGFIVGMLGWFYILYEIFAGEAGQMAAKEASQAVQSSYNSMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTATTCTTCTTGTGGGAAACTCAAAGTGTAGACGGC---AAGTGGAAGACTTCTCTTGTTGTATCTGCATTAGTTACTTTCATCGCTGCAGTGCATTATTTCTACATGCGTGATGTTTGGATT------------------------------TCTACA---------------------GGTGAAACACCAACGGTCTATCGCTACATTGATTGG------------------------CTACTCACAGTACCTTTACTCATGATCGAATTCTTCTTGATTCTGCGTGCC---------ATT---GGTAACGCATCAGGT---GGAATC------------------------------------TTCTGGCGC---CTCCTAATCGGCACCTTGGTCATGTTGGTTCCTGGGTATCCCGCTGAA---------GCC------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------AGTACA------------------ACCCTTGGA---TTTATTGTTGGTATGCTGGGTTGGTTCTATATCTTGTATGAAATC---------------TTC------GCT---GGTGAAGCAGGTCAAATGGCTGCCAAA------GAA---GCATCTCAAGCAGTA---CAG---AGC---TCG---TAT---AAC---TCAATG---CGTTGGATTGTGACTATT---------------------------------------------------------------GGGTGG---------GCGATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFLWETQSVDG-KWKTSLVVSALVTFIAAVHYFYMRDVWI----------ST-------GETPTVYRYIDW--------LLTVPLLMIEFFLILRA---I-GNASG-GI------------FWR-LLIGTLVMLVPGYPAE---A------G--Y-----------I----------------------ST------TLG-FIVGMLGWFYILYEI-----F--A-GEAGQMAAK--E-ASQAV-Q-S-S-Y-N-SM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-b]_DQ903174 [III-Gamma4-b] clone_HB10093_DQ903174 gi|116294077|gb|DQ903174| Uncultured bacterium clone HB10093 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone HB10093 putative proteorhodopsin gene, partial cds. DQ903174 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na East China Sea surface water (ECS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na ATGGTGGCCGCTACTGTATTCTTCTTGTGGGAAACTCAAAGTGTAGACGGCAAGTGGAAGACTTCTCTTGTTGTATCTGCATTAGTTACTTTCATCGCTGCAGTGCATTATTTCTACATGCGTGATGTTTGGATTTCTACAGGTGAAACACCAACGGTCTATCGCTACATTGATTGGCTACTCACAGTACCTTTACTCATGATCGAATTCTTCTTGATTCTGCGTGCCATTGGTAACGCATCAGGTGGAATCTTCTGGCGCCTCCTAATCGGCACCTTGGTCATGTTGGTTCCTGGGTATCTCGCTGAAGCCGGTTATATTAGTACAACCCTTGGATTTATTGTTGGTATGCTGGGTTGGTTCTATATCTTGTATGAAATCTTCGCTGGTGAAGCAGGTCAAATGGCTGCCAAAGAAGCATCTCAAGCAGTACAGAGCTCGTATAACTCAATGCGTTGGATTGTGACTATTGGTTGGGCCATCTACCCA MVAATVFFLWETQSVDGKWKTSLVVSALVTFIAAVHYFYMRDVWISTGETPTVYRYIDWLLTVPLLMIEFFLILRAIGNASGGIFWRLLIGTLVMLVPGYLAEAGYISTTLGFIVGMLGWFYILYEIFAGEAGQMAAKEASQAVQSSYNSMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTATTCTTCTTGTGGGAAACTCAAAGTGTAGACGGC---AAGTGGAAGACTTCTCTTGTTGTATCTGCATTAGTTACTTTCATCGCTGCAGTGCATTATTTCTACATGCGTGATGTTTGGATT------------------------------TCTACA---------------------GGTGAAACACCAACGGTCTATCGCTACATTGATTGG------------------------CTACTCACAGTACCTTTACTCATGATCGAATTCTTCTTGATTCTGCGTGCC---------ATT---GGTAACGCATCAGGT---GGAATC------------------------------------TTCTGGCGC---CTCCTAATCGGCACCTTGGTCATGTTGGTTCCTGGGTATCTCGCTGAA---------GCC------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------AGTACA------------------ACCCTTGGA---TTTATTGTTGGTATGCTGGGTTGGTTCTATATCTTGTATGAAATC---------------TTC------GCT---GGTGAAGCAGGTCAAATGGCTGCCAAA------GAA---GCATCTCAAGCAGTA---CAG---AGC---TCG---TAT---AAC---TCAATG---CGTTGGATTGTGACTATT---------------------------------------------------------------GGTTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFLWETQSVDG-KWKTSLVVSALVTFIAAVHYFYMRDVWI----------ST-------GETPTVYRYIDW--------LLTVPLLMIEFFLILRA---I-GNASG-GI------------FWR-LLIGTLVMLVPGYLAE---A------G--Y-----------I----------------------ST------TLG-FIVGMLGWFYILYEI-----F--A-GEAGQMAAK--E-ASQAV-Q-S-S-Y-N-SM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-b]_DQ203340 [III-Gamma4-b] medHO101_env_samples_DQ203340 gi|77547128|gb|DQ203340| Uncultured bacterium clone medHO101 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO101 predicted proteorhodopsin gene, partial cds DQ203340 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGATTGGCTGCTGACCGTGCCGTTGCTGATGATTGAGTTCTTCTTGATCTTGCGCGCGATCGGTAACGCTCCCGGTGGAATCTTCTGGCGCCTGATGATCGGTACATTGGTCATGTTGGTACCGGGTTACATGGGTGAAGCAGGCTACATGAATGTCACGCTAGGCTTTGTCATCGGTATGGCGGGCTGGTTCTACATTCTGTATGAAATCTTCGCGGGTGAAGCCAGCAAGATGGCGGCGAACGAAGCACCTCCGGCTGTACAAAGCTCATTTAGCACCATGCGTTGGGTTGTGACTGTCGGCTGGGCAATATATCCA SYIDWLLTVPLLMIEFFLILRAIGNAPGGIFWRLMIGTLVMLVPGYMGEAGYMNVTLGFVIGMAGWFYILYEIFAGEASKMAANEAPPAVQSSFSTMRWVVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGATTGG------------------------CTGCTGACCGTGCCGTTGCTGATGATTGAGTTCTTCTTGATCTTGCGCGCG---------ATC---GGTAACGCTCCCGGT---GGAATC------------------------------------TTCTGGCGC---CTGATGATCGGTACATTGGTCATGTTGGTACCGGGTTACATGGGTGAA---------GCA------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACGCTAGGC---TTTGTCATCGGTATGGCGGGCTGGTTCTACATTCTGTATGAAATC---------------TTC------GCG---GGTGAAGCCAGCAAGATGGCGGCGAAC------GAA---GCACCTCCGGCTGTA---CAA---AGC---TCA---TTT---AGC---ACCATG---CGTTGGGTTGTGACTGTC---------------------------------------------------------------GGCTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LLTVPLLMIEFFLILRA---I-GNAPG-GI------------FWR-LMIGTLVMLVPGYMGE---A------G--Y-----------M----------------------NV------TLG-FVIGMAGWFYILYEI-----F--A-GEASKMAAN--E-APPAV-Q-S-S-F-S-TM-RWVVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-b]_FJ618954 [III-Gamma4-b] PR_108_08_10_env_samples_FJ618954 gi|223046791|gb|FJ618954| Uncultured bacterium clone PR 108 08 10 proteorhodopsin gene, partial cds Uncultured bacterium clone PR 108 08 10 proteorhodopsin gene, partial cds FJ618954 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-juil-09 #na Arctic_Ocean Arctic Ocean marine 71.37 -156.68 Photoheterotrophic microbes in the Arctic Ocean in summer and winter Cottrell,M.T. and Kirchman,D.L. Appl. Environ. Microbiol. 75 (15), 49584966 (2009) 19502441 #na TATGTAGATTGGCTACTTACTGTTCCGTTATTGATGATTGAGTTTTTCTTGATCTTGCGAGCTATCGGCAATGCGCCTGGCGGCATTTTCTGGCGTCTCCTCATTGGTTCACTGGTCATGCTAGTTCCAGGATTTCTCGGAGAAGCTGGATACATCAACGTCACGTTAGGCTTTGTAATTGGTACGCTGGGATGGTTCTACATATTGTATGAAATATTTGCCGGTGAAGCTGGTCAAATGGCAGCCGAACAAGCGCCGCCTGCTGTACAAAGCGCGTATGGAACGATGCGATGGGTAGTGACGATCGGCTGGGCAATCTAT YVDWLLTVPLLMIEFFLILRAIGNAPGGIFWRLLIGSLVMLVPGFLGEAGYINVTLGFVIGTLGWFYILYEIFAGEAGQMAAEQAPPAVQSAYGTMRWVVTIGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTAGATTGG------------------------CTACTTACTGTTCCGTTATTGATGATTGAGTTTTTCTTGATCTTGCGAGCT---------ATC---GGCAATGCGCCTGGC---GGCATT------------------------------------TTCTGGCGT---CTCCTCATTGGTTCACTGGTCATGCTAGTTCCAGGATTTCTCGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGTC------------------ACGTTAGGC---TTTGTAATTGGTACGCTGGGATGGTTCTACATATTGTATGAAATA---------------TTT------GCC---GGTGAAGCTGGTCAAATGGCAGCCGAA------CAA---GCGCCGCCTGCTGTA---CAA---AGC---GCG---TAT---GGA---ACGATG---CGATGGGTAGTGACGATC---------------------------------------------------------------GGCTGG---------GCAATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLMIEFFLILRA---I-GNAPG-GI------------FWR-LLIGSLVMLVPGFLGE---A------G--Y-----------I----------------------NV------TLG-FVIGTLGWFYILYEI-----F--A-GEAGQMAAE--Q-APPAV-Q-S-A-Y-G-TM-RWVVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Gamma4-b]_1105154833410 [III-Gamma4-b] JCVI_ORF_1105154833410_GS033_Hypersaline_1m jcvi|1105154833410| 1105154833410 JCVI ORF 1105154833410 1105154833410 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 19-FEB-2004 Hypersaline/1m_depth/S_63.4_psu/GS033/Punta_Cormorant/Hypersaline_Lagoon/Floreana_Island/Galapagos_Islands Pacific Ocean marine -1.2283334 -90.42917 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf GACGGTCTGCGACTACTCCTGGGTCTCGTACCCGTCGGGATGCTTGCGGCGCTTCCATCAACAGCGTTTGCGGCAGCCAACCTTGAATCAGATGACTTCGTTGGAATCTCATTCTGGTTAATTTCAATGGCCTTGATGGCTGCAACCGTGTTTTTCCTGTGGGAAACACAGAGCGTTGACGGCAAGTGGAAAACTTCACTGGTCGTCTCAGGCCTGGTGACTTTCATTGCAGCAGTTCACTACTTCTACATGCGCGACGTGTGGGTCATGACTGGCGAAACACCAACTGTGTATCGGTACATTGACTGGCTTTTGACCGTACCGCTCCTGATGATTGAGTTCTTCTTGATCTTGCGTGCCATCGGCCATGCCTCAGGCGGCATTTTCTGGAGGCTGTTGATCGGTACATTGGTCATGCTCGTTCCAGGATATCTGGGTGAAGCAGGCTACATGGACGTCACCGTTGGATTCATCATCGGGATGCTTGGTTGGTTCTACATCCTGTATGAAATCTTCGCCGGTGAAGCAGCACAGATGGCGACAGACAATGCGTCACCTGCGGTACAGAGCTCATACAACACAATGCGTTGGATCGTGACCATTGGTTGGGCGATTTACCCACTGGGTTATGTCCTTGGCTACTTCGTCTATGTTGACGACATGGGCCAAACGACAGCAGCAGCGAGTGAAGCACTGAACATCGTGTACAACTTGGCTGACGTTGTGAACAAGATCGCCTTCGGCCTTCTGATTTGGTATGCAGCCACATCAGAAAGCAAAGCAGCACAGCCTGCAGCTGCC DGLRLLLGLVPVGMLAALPSTAFAAANLESDDFVGISFWLISMALMAATVFFLWETQSVDGKWKTSLVVSGLVTFIAAVHYFYMRDVWVMTGETPTVYRYIDWLLTVPLLMIEFFLILRAIGHASGGIFWRLLIGTLVMLVPGYLGEAGYMDVTVGFIIGMLGWFYILYEIFAGEAAQMATDNASPAVQSSYNTMRWIVTIGWAIYPLGYVLGYFVYVDDMGQTTAAASEALNIVYNLADVVNKIAFGLLIWYAATSESKAAQPAAA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACGGTCTGCGACTACTCCTGGGTCTCGTACCCGTCGGGATGCTTGCGGCGCTTCCATCAACAGCGTTTGCGGCAGCCAACCTTGAATCAGATGACTTCGTTGGAATCTCATTCTGGTTAATTTCAATGGCCTTGATGGCTGCAACCGTGTTTTTCCTGTGGGAAACACAGAGCGTTGACGGC---AAGTGGAAAACTTCACTGGTCGTCTCAGGCCTGGTGACTTTCATTGCAGCAGTTCACTACTTCTACATGCGCGACGTGTGGGTC------------------------------ATGACT---------------------GGCGAAACACCAACTGTGTATCGGTACATTGACTGG------------------------CTTTTGACCGTACCGCTCCTGATGATTGAGTTCTTCTTGATCTTGCGTGCC---------ATC---GGCCATGCCTCAGGC---GGCATT------------------------------------TTCTGGAGG---CTGTTGATCGGTACATTGGTCATGCTCGTTCCAGGATATCTGGGTGAA---------GCA------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GACGTC------------------ACCGTTGGA---TTCATCATCGGGATGCTTGGTTGGTTCTACATCCTGTATGAAATC---------------TTC------GCC---GGTGAAGCAGCACAGATGGCGACAGAC------AAT---GCGTCACCTGCGGTA---CAG---AGC---TCA---TAC---AAC---ACAATG---CGTTGGATCGTGACCATT---------------------------------------------------------------GGTTGG---------GCGATTTACCCACTGGGTTATGTCCTTGGCTACTTCGTC---TATGTT---------GAC---GACATGGGCCAAACGACAGCAGCAGCGAGTGAAGCACTGAACATCGTGTACAACTTGGCTGACGTTGTGAACAAGATCGCCTTCGGCCTTCTGATTTGGTATGCAGCCACATCAGAA---AGCAAAGCAGCACAGCCTGCAGCTGCC------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------DGLRLLLGLVPVGMLAALPSTAFAAANLESDDFVGISFWLISMALMAATVFFLWETQSVDG-KWKTSLVVSGLVTFIAAVHYFYMRDVWV----------MT-------GETPTVYRYIDW--------LLTVPLLMIEFFLILRA---I-GHASG-GI------------FWR-LLIGTLVMLVPGYLGE---A------G--Y-----------M----------------------DV------TVG-FIIGMLGWFYILYEI-----F--A-GEAAQMATD--N-ASPAV-Q-S-S-Y-N-TM-RWIVTI---------------------GW---AIYPLGYVLGYFV-YV---D-DMGQTTAAASEALNIVYNLADVVNKIAFGLLIWYAATSE-SKAAQPAAA-------------------------------- [III-Gamma4-b]_1105159440176 [III-Gamma4-b] JCVI_ORF_1105159440176_GS033_Hypersaline_1m jcvi|1105159440176| 1105159440176 JCVI ORF 1105159440176 1105159440176 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 19-FEB-2004 Hypersaline/1m_depth/S_63.4_psu/GS033/Punta_Cormorant/Hypersaline_Lagoon/Floreana_Island/Galapagos_Islands Pacific Ocean marine -1.2283334 -90.42917 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf CTGGGTCTCGTACCCGTCGGGATGCTTGCGGCGCTTCCATCAACAGCGTTTGCGGCAGCCAACCTTGAATCAGATGACTTCGTTGGAATCTCATTCTGGTTAATTTCAATGGCCTTGATGGCTGCAACCGTGTTTTTCCTGTGGGAAACACAGAGCGTTGACGGCAAGTGGAAGACTTCACTGGTCGTATCAGGCCTGGTGACTTTTATTGCAGCAGTTCACTACTTCTACATGCGCGACGTGTGGGTCATGACTGGCGAAACACCAACTGTGTATCGTTACATTGACTGGCTCTTGACCGTACCGCTCCTGATGATTGAGTTCTTCTTGATCTTGCGTGCCATCGGCCATGCCTCAGGCGGTATTTTCTGGAGACTGTTGATCGGTACATTGGTCATGCTCGTTCCAGGATATCTGGGCGAAGCAGGCTACATGGACGTCACCGTTGGTTTCATCATCGGGATGCTTGGCTGGTTCTACATCCTGTATGAAATCTTCGCCGGTGAAGCAGCACAGATGGCGACAGACAATGCGTCACCTGCGGTGCAGAGCTCATACAACACAATGCGTTGGATCGTGACCATTGGTTGGGCGATTTACCCACTGGGTTATGTCCTTGGCTACTTCGTCTATGTCGACGACATGGGCCAAACGACAGCAGCAGCGAGTGAAGCACTGAACATCGTGTACAACTTGGCTGACGTTGTGAACAAGATCGCCTTCGGTCTTCTGATTTGGTACGCAGCCACATCAGAAAGCAAAGCAGCACAGCCTGCAGCGGCC LGLVPVGMLAALPSTAFAAANLESDDFVGISFWLISMALMAATVFFLWETQSVDGKWKTSLVVSGLVTFIAAVHYFYMRDVWVMTGETPTVYRYIDWLLTVPLLMIEFFLILRAIGHASGGIFWRLLIGTLVMLVPGYLGEAGYMDVTVGFIIGMLGWFYILYEIFAGEAAQMATDNASPAVQSSYNTMRWIVTIGWAIYPLGYVLGYFVYVDDMGQTTAAASEALNIVYNLADVVNKIAFGLLIWYAATSESKAAQPAAA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGGGTCTCGTACCCGTCGGGATGCTTGCGGCGCTTCCATCAACAGCGTTTGCGGCAGCCAACCTTGAATCAGATGACTTCGTTGGAATCTCATTCTGGTTAATTTCAATGGCCTTGATGGCTGCAACCGTGTTTTTCCTGTGGGAAACACAGAGCGTTGACGGC---AAGTGGAAGACTTCACTGGTCGTATCAGGCCTGGTGACTTTTATTGCAGCAGTTCACTACTTCTACATGCGCGACGTGTGGGTC------------------------------ATGACT---------------------GGCGAAACACCAACTGTGTATCGTTACATTGACTGG------------------------CTCTTGACCGTACCGCTCCTGATGATTGAGTTCTTCTTGATCTTGCGTGCC---------ATC---GGCCATGCCTCAGGC---GGTATT------------------------------------TTCTGGAGA---CTGTTGATCGGTACATTGGTCATGCTCGTTCCAGGATATCTGGGCGAA---------GCA------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GACGTC------------------ACCGTTGGT---TTCATCATCGGGATGCTTGGCTGGTTCTACATCCTGTATGAAATC---------------TTC------GCC---GGTGAAGCAGCACAGATGGCGACAGAC------AAT---GCGTCACCTGCGGTG---CAG---AGC---TCA---TAC---AAC---ACAATG---CGTTGGATCGTGACCATT---------------------------------------------------------------GGTTGG---------GCGATTTACCCACTGGGTTATGTCCTTGGCTACTTCGTC---TATGTC---------GAC---GACATGGGCCAAACGACAGCAGCAGCGAGTGAAGCACTGAACATCGTGTACAACTTGGCTGACGTTGTGAACAAGATCGCCTTCGGTCTTCTGATTTGGTACGCAGCCACATCAGAA---AGCAAAGCAGCACAGCCTGCAGCGGCC------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------LGLVPVGMLAALPSTAFAAANLESDDFVGISFWLISMALMAATVFFLWETQSVDG-KWKTSLVVSGLVTFIAAVHYFYMRDVWV----------MT-------GETPTVYRYIDW--------LLTVPLLMIEFFLILRA---I-GHASG-GI------------FWR-LLIGTLVMLVPGYLGE---A------G--Y-----------M----------------------DV------TVG-FIIGMLGWFYILYEI-----F--A-GEAAQMATD--N-ASPAV-Q-S-S-Y-N-TM-RWIVTI---------------------GW---AIYPLGYVLGYFV-YV---D-DMGQTTAAASEALNIVYNLADVVNKIAFGLLIWYAATSE-SKAAQPAAA-------------------------------- [III-Gamma4-b]_1105128821466 [III-Gamma4-b] JCVI_ORF_1105128821466_GS033_Hypersaline_1m jcvi|1105128821466| 1105128821466 JCVI ORF 1105128821466 1105128821466 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 19-FEB-2004 Hypersaline/1m_depth/S_63.4_psu/GS033/Punta_Cormorant/Hypersaline_Lagoon/Floreana_Island/Galapagos_Islands Pacific Ocean marine -1.2283334 -90.42917 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGCTCAATTATTTGACAGACCTTTGTCCAATACTGTCTGGACATTTTTTATGCTATCTTACGCCGGTCGGAACGGAGTACGACCGCCTTGAAAGTGCAGGGACGGTGTATTCCGTTTTTGCGTTTAAGGTCCCTTCAGGAGGAAATGATAACGAGAAATCTATGCTCCAGTGCCTGAGGAGGCAAACTATGACATTTCAAAAACTACTCCTGGGTCTCGTACCCGTCGGGATGCTTGCGGCGCTTCCATCAACAGCGTTTGCGGCAGCCAACCTTGAATCAGATGACTTCGTTGGAATCTCATTCTGGTTAATTTCAATGGCCTTGATGGCTGCAACCGTGTTTTTCCTGTGGGAAACACAGAGCGTTGACGGCAAGTGGAAGACTTCACTGGTCGTATCAGGTCTGGTGACTTTTATTGCAGCAGTTCACTACTTCTACATGCGCGACGTGTGGGTCATGACTGGCGAAACACCAACTGTGTATCGTTACATTGACTGGCTCTTGACCGTACCGCTCCTGATGATTGAGTTCTTCTTGATCTTGCGTGCCATCGGCCATGCCTCAGGCGGTATTTTCTGGAGACTGTTGATCGGTACATTGGTCATGCTCGTTCCAGGATATCTGGGCGAAGCAGGCTACATGGACGTCACCGTTGGATTCATCATCGGGATGCTTGGCTGGTTCTACATCCTGTATGAAATCTTCGCCGGTGAAGCAGCACAGATGGCGACAGACAATGCGTCACCTGCGGTGCAGAGCTCATACAACACAATGCGTTGGATCGTGACCATTGGTTGGGCGATTTACCCACTGGGTTATGTCCTTGGCTACTTCGTCTATGTCGACGACATGGGCCAAACGACAGCAGCAGCGAGTGAAGCACTGAACATCGTGTACAACTTGGCTGACGTTGTGAACAAGATCGCCTTCGGTCTTCTGATTTGGTACGCAGCCACATCAGAAAGCAAAGCAGCACAGCCTGCAGCGGCC MLNYLTDLCPILSGHFLCYLTPVGTEYDRLESAGTVYSVFAFKVPSGGNDNEKSMLQCLRRQTMTFQKLLLGLVPVGMLAALPSTAFAAANLESDDFVGISFWLISMALMAATVFFLWETQSVDGKWKTSLVVSGLVTFIAAVHYFYMRDVWVMTGETPTVYRYIDWLLTVPLLMIEFFLILRAIGHASGGIFWRLLIGTLVMLVPGYLGEAGYMDVTVGFIIGMLGWFYILYEIFAGEAAQMATDNASPAVQSSYNTMRWIVTIGWAIYPLGYVLGYFVYVDDMGQTTAAASEALNIVYNLADVVNKIAFGLLIWYAATSESKAAQPAAA ---------------------------------------------------------------------ATGCTCAATTATTTGACAGACCTTTGTCCAATACTGTCTGGACATTTTTTATGCTATCTTACGCCGGTCGGAACGGAGTACGACCGCCTTGAAAGTGCAGGGACGGTGTATTCCGTTTTTGCGTTTAAGGTCCCTTCAGGAGGAAATGATAACGAGAAATCTATGCTCCAGTGCCTGAGG---------------AGGCAAACTATGACATTTCAAAAACTACTCCTGGGTCTCGTACCCGTCGGGATGCTTGCGGCGCTTCCATCAACAGCGTTTGCGGCAGCCAACCTTGAATCAGATGACTTCGTTGGAATCTCATTCTGGTTAATTTCAATGGCCTTGATGGCTGCAACCGTGTTTTTCCTGTGGGAAACACAGAGCGTTGACGGC---AAGTGGAAGACTTCACTGGTCGTATCAGGTCTGGTGACTTTTATTGCAGCAGTTCACTACTTCTACATGCGCGACGTGTGGGTC------------------------------ATGACT---------------------GGCGAAACACCAACTGTGTATCGTTACATTGACTGG------------------------CTCTTGACCGTACCGCTCCTGATGATTGAGTTCTTCTTGATCTTGCGTGCC---------ATC---GGCCATGCCTCAGGC---GGTATT------------------------------------TTCTGGAGA---CTGTTGATCGGTACATTGGTCATGCTCGTTCCAGGATATCTGGGCGAA---------GCA------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GACGTC------------------ACCGTTGGA---TTCATCATCGGGATGCTTGGCTGGTTCTACATCCTGTATGAAATC---------------TTC------GCC---GGTGAAGCAGCACAGATGGCGACAGAC------AAT---GCGTCACCTGCGGTG---CAG---AGC---TCA---TAC---AAC---ACAATG---CGTTGGATCGTGACCATT---------------------------------------------------------------GGTTGG---------GCGATTTACCCACTGGGTTATGTCCTTGGCTACTTCGTC---TATGTC---------GAC---GACATGGGCCAAACGACAGCAGCAGCGAGTGAAGCACTGAACATCGTGTACAACTTGGCTGACGTTGTGAACAAGATCGCCTTCGGTCTTCTGATTTGGTACGCAGCCACATCAGAA---AGCAAAGCAGCACAGCCTGCAGCGGCC------------------------------------------------------------------------------------------------ -----------------------MLNYLTDLCPILSGHFLCYLTPVGTEYDRLESAGTVYSVFAFKVPSGGNDNEKSMLQCLR-----RQTMTFQKLLLGLVPVGMLAALPSTAFAAANLESDDFVGISFWLISMALMAATVFFLWETQSVDG-KWKTSLVVSGLVTFIAAVHYFYMRDVWV----------MT-------GETPTVYRYIDW--------LLTVPLLMIEFFLILRA---I-GHASG-GI------------FWR-LLIGTLVMLVPGYLGE---A------G--Y-----------M----------------------DV------TVG-FIIGMLGWFYILYEI-----F--A-GEAAQMATD--N-ASPAV-Q-S-S-Y-N-TM-RWIVTI---------------------GW---AIYPLGYVLGYFV-YV---D-DMGQTTAAASEALNIVYNLADVVNKIAFGLLIWYAATSE-SKAAQPAAA-------------------------------- [III-Gamma4-b]_1105122829956 [III-Gamma4-b] JCVI_ORF_1105122829956_GS033_Hypersaline_1m jcvi|1105122829956| 1105122829956 JCVI ORF 1105122829956 1105122829956 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 19-FEB-2004 Hypersaline/1m_depth/S_63.4_psu/GS033/Punta_Cormorant/Hypersaline_Lagoon/Floreana_Island/Galapagos_Islands Pacific Ocean marine -1.2283334 -90.42917 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf GGCGTGCGGCTGAGGTCATACTTGTCTTGGAATTCTTTATGCTATCTTACGCTAGTCGGAACGGAGTACGACCGCCTTGAAAGTGCAAGGACGGTGTATTCCGTTTTTGCGTTTAAGGTCCCTTCAGGAGGAAATGATAACGAGAAATCTATGCTCCAGTGCCTGAGGAGGCAAACTATGACATTTCAAAAACTACTCCTGGGTCTCGTACCCGTCGGGATGCTTGCGGCGCTTCCATCAACAGCGTTTGCGGCAGCCAACCTTGAATCAGATGACTTCGTTGGAATCTCATTCTGGTTAATTTCAATGGCCTTGATGGCTGCAACCGTGTTTTTCCTGTGGGAAACACAGAGCGTTGACGGCAAGTGGAAAACTTCACTGGTCGTCTCAGGCCTGGTGACTTTCATTGCAGCAGTTCACTACTTCTACATGCGCGACGTGTGGGTCATGACTGGCGAAACACCAACTGTGTATCGGTACATTGACTGGCTTTTGACCGTACCGCTCCTGATGATTGAGTTCTTCTTGATCTTGCGTGCCATCGGCCATGCCTCAGGCGGCATTTTCTGGAGGCTGTTGATCGGTACATTGGTCATGCTCGTTCCAGGATATCTGGGTGAAGCAGGCTACATGGACGTCACCGTTGGATTCATCATCGGGATGCTTGGTTGGTTCTACATCCTGTATGAAATCTTCGCCGGTGAAGCAGCACAGATGGCGACAGACAATGCGTCACCTGCGGTACAGAGCTCATACAACACAATGCGTTGGATCGTGACCATTGGTTGGGCGATTTACCCACTGGGTTATGTCCTTGGCTACTTCGTCTATGTTGACGACATGGGCCAAACGACAGCAGCAGCGAGTGAAGCACTGAACATCGTGTACAACTTGGCTGACGTTGTGAACAAGATCGCCTTAGGCCTTCTGATTTGGTATGCAGCCACATCAGAAAGCAAAGCA GVRLRSYLSWNSLCYLTLVGTEYDRLESARTVYSVFAFKVPSGGNDNEKSMLQCLRRQTMTFQKLLLGLVPVGMLAALPSTAFAAANLESDDFVGISFWLISMALMAATVFFLWETQSVDGKWKTSLVVSGLVTFIAAVHYFYMRDVWVMTGETPTVYRYIDWLLTVPLLMIEFFLILRAIGHASGGIFWRLLIGTLVMLVPGYLGEAGYMDVTVGFIIGMLGWFYILYEIFAGEAAQMATDNASPAVQSSYNTMRWIVTIGWAIYPLGYVLGYFVYVDDMGQTTAAASEALNIVYNLADVVNKIALGLLIWYAATSESKA ---------------------------------------------------------------------------------GGCGTGCGGCTGAGGTCATACTTGTCTTGGAATTCTTTATGCTATCTTACGCTAGTCGGAACGGAGTACGACCGCCTTGAAAGTGCAAGGACGGTGTATTCCGTTTTTGCGTTTAAGGTCCCTTCAGGAGGAAATGATAACGAGAAATCTATGCTCCAGTGCCTGAGG---------------AGGCAAACTATGACATTTCAAAAACTACTCCTGGGTCTCGTACCCGTCGGGATGCTTGCGGCGCTTCCATCAACAGCGTTTGCGGCAGCCAACCTTGAATCAGATGACTTCGTTGGAATCTCATTCTGGTTAATTTCAATGGCCTTGATGGCTGCAACCGTGTTTTTCCTGTGGGAAACACAGAGCGTTGACGGC---AAGTGGAAAACTTCACTGGTCGTCTCAGGCCTGGTGACTTTCATTGCAGCAGTTCACTACTTCTACATGCGCGACGTGTGGGTC------------------------------ATGACT---------------------GGCGAAACACCAACTGTGTATCGGTACATTGACTGG------------------------CTTTTGACCGTACCGCTCCTGATGATTGAGTTCTTCTTGATCTTGCGTGCC---------ATC---GGCCATGCCTCAGGC---GGCATT------------------------------------TTCTGGAGG---CTGTTGATCGGTACATTGGTCATGCTCGTTCCAGGATATCTGGGTGAA---------GCA------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GACGTC------------------ACCGTTGGA---TTCATCATCGGGATGCTTGGTTGGTTCTACATCCTGTATGAAATC---------------TTC------GCC---GGTGAAGCAGCACAGATGGCGACAGAC------AAT---GCGTCACCTGCGGTA---CAG---AGC---TCA---TAC---AAC---ACAATG---CGTTGGATCGTGACCATT---------------------------------------------------------------GGTTGG---------GCGATTTACCCACTGGGTTATGTCCTTGGCTACTTCGTC---TATGTT---------GAC---GACATGGGCCAAACGACAGCAGCAGCGAGTGAAGCACTGAACATCGTGTACAACTTGGCTGACGTTGTGAACAAGATCGCCTTAGGCCTTCTGATTTGGTATGCAGCCACATCAGAA---AGCAAAGCA------------------------------------------------------------------------------------------------------------------ ---------------------------GVRLRSYLSWNSLCYLTLVGTEYDRLESARTVYSVFAFKVPSGGNDNEKSMLQCLR-----RQTMTFQKLLLGLVPVGMLAALPSTAFAAANLESDDFVGISFWLISMALMAATVFFLWETQSVDG-KWKTSLVVSGLVTFIAAVHYFYMRDVWV----------MT-------GETPTVYRYIDW--------LLTVPLLMIEFFLILRA---I-GHASG-GI------------FWR-LLIGTLVMLVPGYLGE---A------G--Y-----------M----------------------DV------TVG-FIIGMLGWFYILYEI-----F--A-GEAAQMATD--N-ASPAV-Q-S-S-Y-N-TM-RWIVTI---------------------GW---AIYPLGYVLGYFV-YV---D-DMGQTTAAASEALNIVYNLADVVNKIALGLLIWYAATSE-SKA-------------------------------------- [III-Gamma4-b]_1105078839473 [III-Gamma4-b] JCVI_ORF_1105078839473 jcvi|1105078839473| 1105078839473 JCVI ORF 1105078839473 1105078839473 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 19-FEB-2004 Hypersaline/1m_depth/S_63.4_psu/GS033/Punta_Cormorant/Hypersaline_Lagoon/Floreana_Island/Galapagos_Islands Pacific Ocean marine -1.2283334 -90.42917 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATTCCTCGCATTAACGGTCATTTGGCTTGGCGCCAACGTCTTGTTCGGCCCCTTTGTCTGACAATCGATGCTCAATTATTTGACAGACCTTTGTCCAATACTTGTCTTGGACATTTTTTATGCTATCTTACGCCGGTCGGAACGGAGTACGACCGCCTTGAAAGTGCAGGGACGGTGTATTCCGTTTTTGCGTTTAAGGTCCCTTCAGGAGGAAATGATAACGAGAAATCTATGCTCCAGTGCCTGAGGAGGCAAACTATGACATTTCAAAAACTACTCCTGGGTCTCGTACCCGTCGGGATGCTTGCGGCGCTTCCATCAACAGCGTTTGCGGCAGCCAACCTTGAATCAGATGACTTCGTTGGAATCTCATTCTGGTTAATTTCAATGGCCTTGATGGCTGCAACCGTGTTTTTCCTGTGGGAAACACAGAGCGTTGACGGCAAGTGGAAAACTTCACTGGTCGTATCAGGTCTGGTGACTTTCATTGCAGCAGTTCACTACTTCTACATGCGCGACGTGTGGGTCATGACTGGCGAAACACCAACTGTGTATCGTTACATTGACTGGCTCTTGACCGTACCGCTCCTGATGATTGAGTTCTTCTTGATCTTGCGTGCCATCGGCCATGCCTCAGGCGGTATTTTCTGGAGACTGTTGATCGGTACATTGGTCATGCTCGTTCCAGGATATCTGGGTGAAGCAGGCTACATGGACGTCACCGTTGGTTTCATCATCGGGATGCTTGGCTGGTTCTACATCCTGTATGAAATCTTCGCCGGTGAAGCAGCACAGATGGCGACAGACAATGCGTCACCTGCGGTGCAGAGCTCATACAACACAATGCGTTGGATCGTGACCATTGGTTGGGCGATTTACCCACTGGGTTATGTCCTTGGCTACTTCGTCTATGTCGACGACATGGGCCAAACGACAGCAGCAGCGAGTGAAGCACTGAACATCGTGTACAACTTGGCTGACGTTGTGAACAAGATCGCCTTCCGG IPRINGHLAWRQRLVRPLCLTIDAQLFDRPLSNTCLGHFLCYLTPVGTEYDRLESAGTVYSVFAFKVPSGGNDNEKSMLQCLRRQTMTFQKLLLGLVPVGMLAALPSTAFAAANLESDDFVGISFWLISMALMAATVFFLWETQSVDGKWKTSLVVSGLVTFIAAVHYFYMRDVWVMTGETPTVYRYIDWLLTVPLLMIEFFLILRAIGHASGGIFWRLLIGTLVMLVPGYLGEAGYMDVTVGFIIGMLGWFYILYEIFAGEAAQMATDNASPAVQSSYNTMRWIVTIGWAIYPLGYVLGYFVYVDDMGQTTAAASEALNIVYNLADVVNKIAFR ATTCCTCGCATTAACGGTCATTTGGCTTGGCGCCAACGTCTTGTTCGGCCCCTTTGTCTGACAATCGATGCTCAATTATTTGACAGACCTTTGTCCAATACTTGTCTTGGACATTTTTTATGCTATCTTACGCCGGTCGGAACGGAGTACGACCGCCTTGAAAGTGCAGGGACGGTGTATTCCGTTTTTGCGTTTAAGGTCCCTTCAGGAGGAAATGATAACGAGAAATCTATGCTCCAGTGCCTGAGG---------------AGGCAAACTATGACATTTCAAAAACTACTCCTGGGTCTCGTACCCGTCGGGATGCTTGCGGCGCTTCCATCAACAGCGTTTGCGGCAGCCAACCTTGAATCAGATGACTTCGTTGGAATCTCATTCTGGTTAATTTCAATGGCCTTGATGGCTGCAACCGTGTTTTTCCTGTGGGAAACACAGAGCGTTGACGGC---AAGTGGAAAACTTCACTGGTCGTATCAGGTCTGGTGACTTTCATTGCAGCAGTTCACTACTTCTACATGCGCGACGTGTGGGTC------------------------------ATGACT---------------------GGCGAAACACCAACTGTGTATCGTTACATTGACTGG------------------------CTCTTGACCGTACCGCTCCTGATGATTGAGTTCTTCTTGATCTTGCGTGCC---------ATC---GGCCATGCCTCAGGC---GGTATT------------------------------------TTCTGGAGA---CTGTTGATCGGTACATTGGTCATGCTCGTTCCAGGATATCTGGGTGAA---------GCA------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GACGTC------------------ACCGTTGGT---TTCATCATCGGGATGCTTGGCTGGTTCTACATCCTGTATGAAATC---------------TTC------GCC---GGTGAAGCAGCACAGATGGCGACAGAC------AAT---GCGTCACCTGCGGTG---CAG---AGC---TCA---TAC---AAC---ACAATG---CGTTGGATCGTGACCATT---------------------------------------------------------------GGTTGG---------GCGATTTACCCACTGGGTTATGTCCTTGGCTACTTCGTC---TATGTC---------GAC---GACATGGGCCAAACGACAGCAGCAGCGAGTGAAGCACTGAACATCGTGTACAACTTGGCTGACGTTGTGAACAAGATCGCCTTCCGG------------------------------------------------------------------------------------------------------------------------------------------------------------ IPRINGHLAWRQRLVRPLCLTIDAQLFDRPLSNTCLGHFLCYLTPVGTEYDRLESAGTVYSVFAFKVPSGGNDNEKSMLQCLR-----RQTMTFQKLLLGLVPVGMLAALPSTAFAAANLESDDFVGISFWLISMALMAATVFFLWETQSVDG-KWKTSLVVSGLVTFIAAVHYFYMRDVWV----------MT-------GETPTVYRYIDW--------LLTVPLLMIEFFLILRA---I-GHASG-GI------------FWR-LLIGTLVMLVPGYLGE---A------G--Y-----------M----------------------DV------TVG-FIIGMLGWFYILYEI-----F--A-GEAAQMATD--N-ASPAV-Q-S-S-Y-N-TM-RWIVTI---------------------GW---AIYPLGYVLGYFV-YV---D-DMGQTTAAASEALNIVYNLADVVNKIAFR---------------------------------------------------- [III-Gamma4-b]_1105082153308 [III-Gamma4-b] JCVI_ORF_1105082153308 jcvi|1105082153308| 1105082153308 JCVI ORF 1105082153308 1105082153308 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 19-FEB-2004 Hypersaline/1m_depth/S_63.4_psu/GS033/Punta_Cormorant/Hypersaline_Lagoon/Floreana_Island/Galapagos_Islands Pacific Ocean marine -1.2283334 -90.42917 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf CTGACAATCGATGCTCAATTATTTGACAGACCTTTGTCCAATACTTGTCTTGGACATTTTTTATGCTATCTTACGCCGGTCGGAACGGAGTACGACCGCCTTGAAAGTGCAGGGACGGTGTATTCCGTTTTTGCGTTTAAGGTCCCTTCAGGAGGAAATGATAACGAGAAATCTATGCTCCAGTGCCTGAGGAGGCAAACTATGACATTTCAAAAACTACTCCTGGGTCTCGTACCCGTCGGGATGCTTGCGGCGCTTCCATCAACAGCGTTTGCGGCAGCCAACCTTGAATCAGATGACTTCGTTGGAATCTCATTCTGGTTAATTTCAATGGCCTTGATGGCTGCAACCGTGTTTTTCCTGTGGGAAACACAGAGCGTTGACGGCAAGTGGAAAACTTCACTGGTCGTATCAGGTCTGGTGACTTTCATTGCAGCAGTTCACTACTTCTACATGCGCGACGTGTGGGTCATGACTGGCGAAACACCAACTGTGTATCGTTACATTGACTGGCTCTTGACCGTACCGCTCCTGATGATTGAGTTCTTCTTGATCCTGCGTGCCATCGGCCATGCCTCAGGCGGTATTTTCTGGAGACTGTTGATCGGTACATTGGTCATGCTCGTTCCAGGATATCTGGGTGAAGCAGGCTACATGGACGTCACCGTTGGATTCATCATCGGGATGCTTGGCTGGTTCTACATCCTGTATGAAATCTTCGCCGGTGAAGCAGCACAGATGGCGACAGACAATGCGTCACCTGCGGTGCAGAGCTCATACAACACAATGCGTTGGATCGTGACCATTGGTTGGGCGATTTACCCACTGGGTTATGTCCTTGGCTACTTCGTCTATGTCGACGACATGGGCCAAACGACAGCAGCAGCGAGTGAAGCACTGAACATCGTGTACAACTTGGCTGACGTTGTGAACAAGATCGCCTTCCGGTCTTCC LTIDAQLFDRPLSNTCLGHFLCYLTPVGTEYDRLESAGTVYSVFAFKVPSGGNDNEKSMLQCLRRQTMTFQKLLLGLVPVGMLAALPSTAFAAANLESDDFVGISFWLISMALMAATVFFLWETQSVDGKWKTSLVVSGLVTFIAAVHYFYMRDVWVMTGETPTVYRYIDWLLTVPLLMIEFFLILRAIGHASGGIFWRLLIGTLVMLVPGYLGEAGYMDVTVGFIIGMLGWFYILYEIFAGEAAQMATDNASPAVQSSYNTMRWIVTIGWAIYPLGYVLGYFVYVDDMGQTTAAASEALNIVYNLADVVNKIAFRSS ---------------------------------------------------------CTGACAATCGATGCTCAATTATTTGACAGACCTTTGTCCAATACTTGTCTTGGACATTTTTTATGCTATCTTACGCCGGTCGGAACGGAGTACGACCGCCTTGAAAGTGCAGGGACGGTGTATTCCGTTTTTGCGTTTAAGGTCCCTTCAGGAGGAAATGATAACGAGAAATCTATGCTCCAGTGCCTGAGG---------------AGGCAAACTATGACATTTCAAAAACTACTCCTGGGTCTCGTACCCGTCGGGATGCTTGCGGCGCTTCCATCAACAGCGTTTGCGGCAGCCAACCTTGAATCAGATGACTTCGTTGGAATCTCATTCTGGTTAATTTCAATGGCCTTGATGGCTGCAACCGTGTTTTTCCTGTGGGAAACACAGAGCGTTGACGGC---AAGTGGAAAACTTCACTGGTCGTATCAGGTCTGGTGACTTTCATTGCAGCAGTTCACTACTTCTACATGCGCGACGTGTGGGTC------------------------------ATGACT---------------------GGCGAAACACCAACTGTGTATCGTTACATTGACTGG------------------------CTCTTGACCGTACCGCTCCTGATGATTGAGTTCTTCTTGATCCTGCGTGCC---------ATC---GGCCATGCCTCAGGC---GGTATT------------------------------------TTCTGGAGA---CTGTTGATCGGTACATTGGTCATGCTCGTTCCAGGATATCTGGGTGAA---------GCA------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GACGTC------------------ACCGTTGGA---TTCATCATCGGGATGCTTGGCTGGTTCTACATCCTGTATGAAATC---------------TTC------GCC---GGTGAAGCAGCACAGATGGCGACAGAC------AAT---GCGTCACCTGCGGTG---CAG---AGC---TCA---TAC---AAC---ACAATG---CGTTGGATCGTGACCATT---------------------------------------------------------------GGTTGG---------GCGATTTACCCACTGGGTTATGTCCTTGGCTACTTCGTC---TATGTC---------GAC---GACATGGGCCAAACGACAGCAGCAGCGAGTGAAGCACTGAACATCGTGTACAACTTGGCTGACGTTGTGAACAAGATCGCCTTCCGGTCTTCC------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------LTIDAQLFDRPLSNTCLGHFLCYLTPVGTEYDRLESAGTVYSVFAFKVPSGGNDNEKSMLQCLR-----RQTMTFQKLLLGLVPVGMLAALPSTAFAAANLESDDFVGISFWLISMALMAATVFFLWETQSVDG-KWKTSLVVSGLVTFIAAVHYFYMRDVWV----------MT-------GETPTVYRYIDW--------LLTVPLLMIEFFLILRA---I-GHASG-GI------------FWR-LLIGTLVMLVPGYLGE---A------G--Y-----------M----------------------DV------TVG-FIIGMLGWFYILYEI-----F--A-GEAAQMATD--N-ASPAV-Q-S-S-Y-N-TM-RWIVTI---------------------GW---AIYPLGYVLGYFV-YV---D-DMGQTTAAASEALNIVYNLADVVNKIAFRSS-------------------------------------------------- [III-Gamma4-b]_1105107424408 [III-Gamma4-b] JCVI_ORF_1105107424408_GS033_Hypersaline_1m jcvi|1105107424408| 1105107424408 JCVI ORF 1105107424408 1105107424408 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump ?97 ; ?108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 19-FEB-2004 Hypersaline/1m_depth/S_63.4_psu/GS033/Punta_Cormorant/Hypersaline_Lagoon/Floreana_Island/Galapagos_Islands Pacific Ocean marine -1.2283334 -90.42917 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf AAGCGGGGGCACTTCAGATTATTTGACAGACCTTTGTCCAATACTTGTCTTGGACATTTTTTATGCTATCTTACGCCGGTCGGAACGGAGTACGACCGCCTTGAAAGTGCAGGGACGGTGTATTCCGTTTTTGCGTTTAAGGTCCCTTCAGGAGGAAATGATAACGAGAAATCTATGCTCCAGTGCCTGAGGAGGCAAACTATGACATTTCAAAAACTACTCCTGGGTCTCGTACCCGTCGGGATGCTTGCGGCGCTTCCATCAACAGCGTTTGCGGCAGCCAACCTTGAATCAGATGACTTCGTTGGAATCTCATTCTGGTTAATTTCAATGGCCTTGATGGCTGCAACCGTGTTTTTCCTGTGGGAAACACAGAGCGTTGACGGCAAGTGGAAGACTTCACTGGTCGTATCAGGTCTGGTGACTTTCATTGCAGCAGTTCACTACTTCTACATGCGCGACGTGTGGGTCATGACTGGCGAAACACCAACTGTGTATCGTTACATTGACTGGCTCTTGACCGTACCGCTCCTGATGATTGAGTTCTTCTTGATCTTGCGTGCCATCGGCCATGCCTCAGGCGGTATTTTCTGGAGACTGTTGATCGGTACATTGGTCATGCTCGTTCCAGGATATCTGGGTGAAGCAGGCTACATGGACGTCACCGTTGGTTTCATCATCGGGATGCTTGGCTGGTTCTACATCCTGTATGAAATCTTCGCCGGTGAAGCAGCACAGATGGCGACAGACAATGCGTCACCTGCGGTGCAGAGCTCATACAACACAATGCGTTGGATCGTGACCATTGGTTGGGCGATTTACCCACTGGGTTATGTCCTTGGCTACTTCGTCTATGTCGACGACATGGGCCAAACGACAGCAGCAGCGAGTGAAGCACTGAACATCGTGTACAACTTGGCTGACGTTGTGAACAAGATCGCCTTCGGTCTTCTGATTTTGGTACGCAGCCACATCAGAAAGCAAAGCAGCACAGCCTGCAGCGGCCTAAAGGCATTCAACGGGGCCTCATATGAGGCTCCGTTTCGCATGCATTTCTTCGATGGATGTGCATGCGAAACGGACAAACACAGAAGGATGAGC KRGHFRLFDRPLSNTCLGHFLCYLTPVGTEYDRLESAGTVYSVFAFKVPSGGNDNEKSMLQCLRRQTMTFQKLLLGLVPVGMLAALPSTAFAAANLESDDFVGISFWLISMALMAATVFFLWETQSVDGKWKTSLVVSGLVTFIAAVHYFYMRDVWVMTGETPTVYRYIDWLLTVPLLMIEFFLILRAIGHASGGIFWRLLIGTLVMLVPGYLGEAGYMDVTVGFIIGMLGWFYILYEIFAGEAAQMATDNASPAVQSSYNTMRWIVTIGWAIYPLGYVLGYFVYVDDMGQTTAAASEALNIVYNLADVVNKIAFGLLILVRSHIRKQSSTACSGLKAFNGASYEAPFRMHFFDGCACETDKHRRMS ---------------------------------------------------------AAGCGGGGGCACTTCAGATTATTTGACAGACCTTTGTCCAATACTTGTCTTGGACATTTTTTATGCTATCTTACGCCGGTCGGAACGGAGTACGACCGCCTTGAAAGTGCAGGGACGGTGTATTCCGTTTTTGCGTTTAAGGTCCCTTCAGGAGGAAATGATAACGAGAAATCTATGCTCCAGTGCCTGAGG---------------AGGCAAACTATGACATTTCAAAAACTACTCCTGGGTCTCGTACCCGTCGGGATGCTTGCGGCGCTTCCATCAACAGCGTTTGCGGCAGCCAACCTTGAATCAGATGACTTCGTTGGAATCTCATTCTGGTTAATTTCAATGGCCTTGATGGCTGCAACCGTGTTTTTCCTGTGGGAAACACAGAGCGTTGACGGC---AAGTGGAAGACTTCACTGGTCGTATCAGGTCTGGTGACTTTCATTGCAGCAGTTCACTACTTCTACATGCGCGACGTGTGGGTC------------------------------ATGACT---------------------GGCGAAACACCAACTGTGTATCGTTACATTGACTGG------------------------CTCTTGACCGTACCGCTCCTGATGATTGAGTTCTTCTTGATCTTGCGTGCC---------ATC---GGCCATGCCTCAGGC---GGTATT------------------------------------TTCTGGAGA---CTGTTGATCGGTACATTGGTCATGCTCGTTCCAGGATATCTGGGTGAA---------GCA------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GACGTC------------------ACCGTTGGT---TTCATCATCGGGATGCTTGGCTGGTTCTACATCCTGTATGAAATC---------------TTC------GCC---GGTGAAGCAGCACAGATGGCGACAGAC------AAT---GCGTCACCTGCGGTG---CAG---AGC---TCA---TAC---AAC---ACAATG---CGTTGGATCGTGACCATT---------------------------------------------------------------GGTTGG---------GCGATTTACCCACTGGGTTATGTCCTTGGCTACTTCGTC---TATGTC---------GAC---GACATGGGCCAAACGACAGCAGCAGCGAGTGAAGCACTGAACATCGTGTACAACTTGGCTGACGTTGTGAACAAGATCGCCTTCGGTCTTCTGATTTTGGTACGCAGCCACATCAGA---AAGCAAAGCAGCACAGCCTGCAGCGGCCTAAAGGCATTCAACGGGGCCTCATATGAGGCTCCGTTTCGCATGCATTTCTTCGATGGATGTGCATGCGAAACGGACAAACACAGAAGGATGAGC -------------------KRGHFRLFDRPLSNTCLGHFLCYLTPVGTEYDRLESAGTVYSVFAFKVPSGGNDNEKSMLQCLR-----RQTMTFQKLLLGLVPVGMLAALPSTAFAAANLESDDFVGISFWLISMALMAATVFFLWETQSVDG-KWKTSLVVSGLVTFIAAVHYFYMRDVWV----------MT-------GETPTVYRYIDW--------LLTVPLLMIEFFLILRA---I-GHASG-GI------------FWR-LLIGTLVMLVPGYLGE---A------G--Y-----------M----------------------DV------TVG-FIIGMLGWFYILYEI-----F--A-GEAAQMATD--N-ASPAV-Q-S-S-Y-N-TM-RWIVTI---------------------GW---AIYPLGYVLGYFV-YV---D-DMGQTTAAASEALNIVYNLADVVNKIAFGLLILVRSHIR-KQSSTACSGLKAFNGASYEAPFRMHFFDGCACETDKHRRMS [III-Gamma4-b]_1105107114976 [III-Gamma4-b] JCVI_ORF_1105107114976_GS033_Hypersaline_1m jcvi|1105107114976| 1105107114976 JCVI ORF 1105107114976 1105107114976 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 19-FEB-2004 Hypersaline/1m_depth/S_63.4_psu/GS033/Punta_Cormorant/Hypersaline_Lagoon/Floreana_Island/Galapagos_Islands Pacific Ocean marine -1.2283334 -90.42917 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf GGTTTTTTTAGCTTGCTTAAGCACTATGACATGTTCAGAAGAGCTACGTCCTGGGTCTCGTACGCCGTCGGGAGTGCTTGCGGCGCTGTCCATCGAACAGCGTTTGCGGCAGCCAACCTTGAATCAGATGACTTCGTTGGAATCTCATTCTGGTTAATTTCAATGGCCTTGATGGCTGCAACCGTGTTTTTCCTGTGGGAAACACAGAGCGTTGACGGCAAGTGGAAAACTTCACTGGTCGTCTCAGGCCTGGTGACTTTCATTGCAGCAGTTCACTACTTCTACATGCGCGACGTGTGGGTCATGACTGGCGAAACTCCAACTGTGTATCGTTACATTGACTGGCTCTTGACCGTACCGCTCCTGATGATTGAGTTCTTCTTGATCTTGCGTGCCATCGGCCATGCCTCAGGCGGTATTTTCTGGAGACTGTTGATCGGTACATTGGTCATGCTCGTTCCAGGATATCTGGGTGAAGCAGGCTACATGGACGTCACCGTTGGATTCATCATCGGGATGCTTGGCTGGTTCTACATTCTGTATGAAATCTTCGCCGGTGAAGCAGCACAGATGGCGACAGACAATGCGTCACCTGCGGTGCAGAGCTCATACAACACAATGCGTTGGATCGTGACCATTGGTTGGGCGATTTACCCACTGGGTTATGTCCTTGGCTACTTCGTCTATGTCGACGACATGGGCCAAACGACAGCCGCAGCGAGCGAAGCACTGAACATCGTGTACAACTTGGCTGACGTTGTGAACAAGATCGCCTTCGGTCTTCTGATTTGGTACGCAGCCACATCAGAAAGCAAAGCAGCACAGCCTGCAGCTGCC GFFSLLKHYDMFRRATSWVSYAVGSACGAVHRTAFAAANLESDDFVGISFWLISMALMAATVFFLWETQSVDGKWKTSLVVSGLVTFIAAVHYFYMRDVWVMTGETPTVYRYIDWLLTVPLLMIEFFLILRAIGHASGGIFWRLLIGTLVMLVPGYLGEAGYMDVTVGFIIGMLGWFYILYEIFAGEAAQMATDNASPAVQSSYNTMRWIVTIGWAIYPLGYVLGYFVYVDDMGQTTAAASEALNIVYNLADVVNKIAFGLLIWYAATSESKAAQPAAA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTTTTTTTAGCTTGCTTAAGCACTATGACATGTTCAGAAGAGCTACGTCCTGGGTCTCGTACGCCGTCGGG------------AGTGCTTGCGGCGCTGTCCATCGAACAGCGTTTGCGGCAGCCAACCTTGAATCAGATGACTTCGTTGGAATCTCATTCTGGTTAATTTCAATGGCCTTGATGGCTGCAACCGTGTTTTTCCTGTGGGAAACACAGAGCGTTGACGGC---AAGTGGAAAACTTCACTGGTCGTCTCAGGCCTGGTGACTTTCATTGCAGCAGTTCACTACTTCTACATGCGCGACGTGTGGGTC------------------------------ATGACT---------------------GGCGAAACTCCAACTGTGTATCGTTACATTGACTGG------------------------CTCTTGACCGTACCGCTCCTGATGATTGAGTTCTTCTTGATCTTGCGTGCC---------ATC---GGCCATGCCTCAGGC---GGTATT------------------------------------TTCTGGAGA---CTGTTGATCGGTACATTGGTCATGCTCGTTCCAGGATATCTGGGTGAA---------GCA------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GACGTC------------------ACCGTTGGA---TTCATCATCGGGATGCTTGGCTGGTTCTACATTCTGTATGAAATC---------------TTC------GCC---GGTGAAGCAGCACAGATGGCGACAGAC------AAT---GCGTCACCTGCGGTG---CAG---AGC---TCA---TAC---AAC---ACAATG---CGTTGGATCGTGACCATT---------------------------------------------------------------GGTTGG---------GCGATTTACCCACTGGGTTATGTCCTTGGCTACTTCGTC---TATGTC---------GAC---GACATGGGCCAAACGACAGCCGCAGCGAGCGAAGCACTGAACATCGTGTACAACTTGGCTGACGTTGTGAACAAGATCGCCTTCGGTCTTCTGATTTGGTACGCAGCCACATCAGAA---AGCAAAGCAGCACAGCCTGCAGCTGCC------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------GFFSLLKHYDMFRRATSWVSYAVG----SACGAVHRTAFAAANLESDDFVGISFWLISMALMAATVFFLWETQSVDG-KWKTSLVVSGLVTFIAAVHYFYMRDVWV----------MT-------GETPTVYRYIDW--------LLTVPLLMIEFFLILRA---I-GHASG-GI------------FWR-LLIGTLVMLVPGYLGE---A------G--Y-----------M----------------------DV------TVG-FIIGMLGWFYILYEI-----F--A-GEAAQMATD--N-ASPAV-Q-S-S-Y-N-TM-RWIVTI---------------------GW---AIYPLGYVLGYFV-YV---D-DMGQTTAAASEALNIVYNLADVVNKIAFGLLIWYAATSE-SKAAQPAAA-------------------------------- [III-Gamma4-b]_1105101308884 [III-Gamma4-b] JCVI_ORF_1105101308884_GS033_Hypersaline_1m jcvi|1105101308884| 1105101308884 JCVI ORF 1105101308884 1105101308884 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 19-FEB-2004 Hypersaline/1m_depth/S_63.4_psu/GS033/Punta_Cormorant/Hypersaline_Lagoon/Floreana_Island/Galapagos_Islands Pacific Ocean marine -1.2283334 -90.42917 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ACGGCGGGCATGATACGAGAATCTATGCTCCAGTGCCTGAGGAGGCAAACTATGACATTTCAAAAACTACTCCTGGGTCTCGTACCCGTCGGGATGCTTGCGGCGCTTCCATCAACAGCGTTTGCGGCAGCCAACCTTGAATCAGATGACTTCGTTGGAATCTCATTCTGGTTAATTTCAATGGCCTTGATGGCTGCAACCGTGTTTTTCCTGTGGGAAACACAGAGCGTTGACGGCAAGTGGAAAACGTCACTGGTCGTATCAGGTCTGGTGACTTTCATTGCAGCAGTTCACTACTTCTACATGCGCGACGTGTGGGTCATGACTGGCGAAACACCAACTGTGTATCGTTACATTGACTGGCTCTTGACCGTACCGCTCCTGATGATTGAGTTCTTCTTGATCTTGCGTGCCATCGGCCATGCCTCAGGCGGTATTTTCTGGAGACTGTTGATCGGTACATTGGTCATGCTCGTTCCAGGATATCTGGGTGAAGCAGGCTACATGGACGTCACCGTTGGTTTCATCATCGGGATGCTTGGCTGGTTCTACATCCTGTATGAAATCTTCGCCGGTGAAGCAGCACAGATGGCGACAGACAATGCGTCACCTGCGGTGCAGAGCTCATACAACACAATGCGTTGGATCGTGACCATTGGTTGGGCGATTTACCCACTGGGTTATGTCCTTGGCTACTTCGTCTATGTCGACGACATGGGCCAAACGACAGCAGCAGCGAGTGAAGCACTGAACATCGTGTACAACTTGGCTGACGTTGTGAACAAGATCGCCTTCGGTCTTCTGATTTGGTACGCAGCCACATCAGAAAGCAAAGCAGCACAGCCTGCAGCGGCC TAGMIRESMLQCLRRQTMTFQKLLLGLVPVGMLAALPSTAFAAANLESDDFVGISFWLISMALMAATVFFLWETQSVDGKWKTSLVVSGLVTFIAAVHYFYMRDVWVMTGETPTVYRYIDWLLTVPLLMIEFFLILRAIGHASGGIFWRLLIGTLVMLVPGYLGEAGYMDVTVGFIIGMLGWFYILYEIFAGEAAQMATDNASPAVQSSYNTMRWIVTIGWAIYPLGYVLGYFVYVDDMGQTTAAASEALNIVYNLADVVNKIAFGLLIWYAATSESKAAQPAAA ------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGGCGGGCATGATA---------------------------------------------CGAGAATCTATGCTCCAGTGCCTGAGG---------------AGGCAAACTATGACATTTCAAAAACTACTCCTGGGTCTCGTACCCGTCGGGATGCTTGCGGCGCTTCCATCAACAGCGTTTGCGGCAGCCAACCTTGAATCAGATGACTTCGTTGGAATCTCATTCTGGTTAATTTCAATGGCCTTGATGGCTGCAACCGTGTTTTTCCTGTGGGAAACACAGAGCGTTGACGGC---AAGTGGAAAACGTCACTGGTCGTATCAGGTCTGGTGACTTTCATTGCAGCAGTTCACTACTTCTACATGCGCGACGTGTGGGTC------------------------------ATGACT---------------------GGCGAAACACCAACTGTGTATCGTTACATTGACTGG------------------------CTCTTGACCGTACCGCTCCTGATGATTGAGTTCTTCTTGATCTTGCGTGCC---------ATC---GGCCATGCCTCAGGC---GGTATT------------------------------------TTCTGGAGA---CTGTTGATCGGTACATTGGTCATGCTCGTTCCAGGATATCTGGGTGAA---------GCA------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GACGTC------------------ACCGTTGGT---TTCATCATCGGGATGCTTGGCTGGTTCTACATCCTGTATGAAATC---------------TTC------GCC---GGTGAAGCAGCACAGATGGCGACAGAC------AAT---GCGTCACCTGCGGTG---CAG---AGC---TCA---TAC---AAC---ACAATG---CGTTGGATCGTGACCATT---------------------------------------------------------------GGTTGG---------GCGATTTACCCACTGGGTTATGTCCTTGGCTACTTCGTC---TATGTC---------GAC---GACATGGGCCAAACGACAGCAGCAGCGAGTGAAGCACTGAACATCGTGTACAACTTGGCTGACGTTGTGAACAAGATCGCCTTCGGTCTTCTGATTTGGTACGCAGCCACATCAGAA---AGCAAAGCAGCACAGCCTGCAGCGGCC------------------------------------------------------------------------------------------------ ------------------------------------------------------TAGMI---------------RESMLQCLR-----RQTMTFQKLLLGLVPVGMLAALPSTAFAAANLESDDFVGISFWLISMALMAATVFFLWETQSVDG-KWKTSLVVSGLVTFIAAVHYFYMRDVWV----------MT-------GETPTVYRYIDW--------LLTVPLLMIEFFLILRA---I-GHASG-GI------------FWR-LLIGTLVMLVPGYLGE---A------G--Y-----------M----------------------DV------TVG-FIIGMLGWFYILYEI-----F--A-GEAAQMATD--N-ASPAV-Q-S-S-Y-N-TM-RWIVTI---------------------GW---AIYPLGYVLGYFV-YV---D-DMGQTTAAASEALNIVYNLADVVNKIAFGLLIWYAATSE-SKAAQPAAA-------------------------------- [III-Gamma4-b]_1105088681636 [III-Gamma4-b] JCVI_ORF_1105088681636_GS033_Hypersaline_1m jcvi|1105088681636| 1105088681636 JCVI ORF 1105088681636 1105088681636 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 19-FEB-2004 Hypersaline/1m_depth/S_63.4_psu/GS033/Punta_Cormorant/Hypersaline_Lagoon/Floreana_Island/Galapagos_Islands Pacific Ocean marine -1.2283334 -90.42917 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf CTGTTCGGCCCCTTGTCTGACATCGATGCTCATTATTTGACAGACCTTTGTCCAATACTGTCTTGGACATTTTTATGCTATCTTACGCCGGTCGGAACGGAGTACGACCGCCTTGAAAGTGCAGGGACGGTGTATTCCGTTTTTGCGTTTAAGGTCCCTTCAGGAGGAAATGATAACGAGAAATCTATGCTCCAGTGCCTGAGGAGGCAAACTATGACATTTCAAAAACTACTCCTGGGTCTCGTACCCGTCGGGATGCTTGCGGCGCTTCCATCAACAGCGTTTGCGGCAGCCAACCTTGAATCAGATGACTTCGTTGGAATCTCATTCTGGTTAATTTCAATGGCCTTGATGGCTGCAACCGTGTTTTTCCTGTGGGAAACACAGAGCGTTGACGGCAAGTGGAAGACTTCACTGGTCGTATCAGGTCTGGTGACTTTTATTGCAGCAGTTCACTACTTCTACATGCGCGACGTGTGGGTCATGACTGGCGAAACACCAACTGTGTATCGTTACATTGACTGGCTCTTGACCGTACCGCTCCTGATGATTGAGTTCTTCTTGATCTTGCGTGCCATCGGCCATGCCTCAGGCGGTATTTTCTGGAGACTGTTGATCGGTACATTGGTCATGCTCGTTCCAGGATATCTGGGCGAAGCAGGCTACATGGACGTCACCGTTGGATTCATCATCGGGATGCTTGGCTGGTTCTACATCCTGTATGAAATCTTCGCCGGTGAAGCAGCACAGATGGCGACAGACAATGCGTCACCTGCGGTGCAGAGCTCATACAACACAATGCGTTGGATCGTGACCATTGGTTGGGCGATTTACCCACTGGGTTATGTCCTTGGCTACTTCGTCTATGTCGACGACATGGGCCAAACGACAGCAGCAGCGAGTGAAGCACTGAACATCGTGTACAACTTGGCTGACGTTGTGAACAAGATCGCCTTCGGTCTTCTGATTTGGTACGCAGCCACATCAGAAAGCAAAGCAGCACAGCCTGCAGCGGCC LFGPLSDIDAHYLTDLCPILSWTFLCYLTPVGTEYDRLESAGTVYSVFAFKVPSGGNDNEKSMLQCLRRQTMTFQKLLLGLVPVGMLAALPSTAFAAANLESDDFVGISFWLISMALMAATVFFLWETQSVDGKWKTSLVVSGLVTFIAAVHYFYMRDVWVMTGETPTVYRYIDWLLTVPLLMIEFFLILRAIGHASGGIFWRLLIGTLVMLVPGYLGEAGYMDVTVGFIIGMLGWFYILYEIFAGEAAQMATDNASPAVQSSYNTMRWIVTIGWAIYPLGYVLGYFVYVDDMGQTTAAASEALNIVYNLADVVNKIAFGLLIWYAATSESKAAQPAAA CTGTTCGGCCCC---------------------------------------------TTGTCTGACATCGATGCTCATTATTTGACAGACCTTTGTCCAATACTGTCTTGGACATTTTTATGCTATCTTACGCCGGTCGGAACGGAGTACGACCGCCTTGAAAGTGCAGGGACGGTGTATTCCGTTTTTGCGTTTAAGGTCCCTTCAGGAGGAAATGATAACGAGAAATCTATGCTCCAGTGCCTGAGG---------------AGGCAAACTATGACATTTCAAAAACTACTCCTGGGTCTCGTACCCGTCGGGATGCTTGCGGCGCTTCCATCAACAGCGTTTGCGGCAGCCAACCTTGAATCAGATGACTTCGTTGGAATCTCATTCTGGTTAATTTCAATGGCCTTGATGGCTGCAACCGTGTTTTTCCTGTGGGAAACACAGAGCGTTGACGGC---AAGTGGAAGACTTCACTGGTCGTATCAGGTCTGGTGACTTTTATTGCAGCAGTTCACTACTTCTACATGCGCGACGTGTGGGTC------------------------------ATGACT---------------------GGCGAAACACCAACTGTGTATCGTTACATTGACTGG------------------------CTCTTGACCGTACCGCTCCTGATGATTGAGTTCTTCTTGATCTTGCGTGCC---------ATC---GGCCATGCCTCAGGC---GGTATT------------------------------------TTCTGGAGA---CTGTTGATCGGTACATTGGTCATGCTCGTTCCAGGATATCTGGGCGAA---------GCA------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GACGTC------------------ACCGTTGGA---TTCATCATCGGGATGCTTGGCTGGTTCTACATCCTGTATGAAATC---------------TTC------GCC---GGTGAAGCAGCACAGATGGCGACAGAC------AAT---GCGTCACCTGCGGTG---CAG---AGC---TCA---TAC---AAC---ACAATG---CGTTGGATCGTGACCATT---------------------------------------------------------------GGTTGG---------GCGATTTACCCACTGGGTTATGTCCTTGGCTACTTCGTC---TATGTC---------GAC---GACATGGGCCAAACGACAGCAGCAGCGAGTGAAGCACTGAACATCGTGTACAACTTGGCTGACGTTGTGAACAAGATCGCCTTCGGTCTTCTGATTTGGTACGCAGCCACATCAGAA---AGCAAAGCAGCACAGCCTGCAGCGGCC------------------------------------------------------------------------------------------------ LFGP---------------LSDIDAHYLTDLCPILSWTFLCYLTPVGTEYDRLESAGTVYSVFAFKVPSGGNDNEKSMLQCLR-----RQTMTFQKLLLGLVPVGMLAALPSTAFAAANLESDDFVGISFWLISMALMAATVFFLWETQSVDG-KWKTSLVVSGLVTFIAAVHYFYMRDVWV----------MT-------GETPTVYRYIDW--------LLTVPLLMIEFFLILRA---I-GHASG-GI------------FWR-LLIGTLVMLVPGYLGE---A------G--Y-----------M----------------------DV------TVG-FIIGMLGWFYILYEI-----F--A-GEAAQMATD--N-ASPAV-Q-S-S-Y-N-TM-RWIVTI---------------------GW---AIYPLGYVLGYFV-YV---D-DMGQTTAAASEALNIVYNLADVVNKIAFGLLIWYAATSE-SKAAQPAAA-------------------------------- [III-Gamma4-a]_DQ203566 [III-Gamma4-a] MedHO1202G6_env_samples_DQ203566 gi|77547580|gb|DQ203566| Uncultured bacterium clone MedHO1202G6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202G6 predicted proteorhodopsin gene, partial cds DQ203566 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATCGATTGGCTGTTGACCGTTCCACTTCAAATGATTGAGTTCTATCTGATACTTGCTGCCATCGGTTTGGCATCAGCTGGAATGTTCTGGAGACTATTGATCGGCACAATGATCATGTTGGTTGCTGGTTTTATGGGCGAAGCTGGTTATATCGATGCTACAGTCGGATTTATCATAGGAATGCTGGGATGGTTCTACATTCTGTATGAAATTTTTGCTGGCGATGCGGGAAAACAGGCGGGACAAGCCTCAGCTGCAGTCCAGAGTGCATTTGGAAATATGCGCTTAGTGGTCACTATCGGTTGGGCCATATATCCA SYIDWLLTVPLQMIEFYLILAAIGLASAGMFWRLLIGTMIMLVAGFMGEAGYIDATVGFIIGMLGWFYILYEIFAGDAGKQAGQASAAVQSAFGNMRLVVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATCGATTGG------------------------CTGTTGACCGTTCCACTTCAAATGATTGAGTTCTATCTGATACTTGCTGCC---------ATC---GGTTTGGCATCAGCT---GGAATG------------------------------------TTCTGGAGA---CTATTGATCGGCACAATGATCATGTTGGTTGCTGGTTTTATGGGCGAA---------GCT------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------GATGCT------------------ACAGTCGGA---TTTATCATAGGAATGCTGGGATGGTTCTACATTCTGTATGAAATT---------------TTT------GCT---GGCGATGCGGGAAAA---CAGGCGGGA------CAA---GCCTCAGCTGCAGTC---CAG---AGT---GCA---TTT---GGA---AATATG---CGCTTAGTGGTCACTATC---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LLTVPLQMIEFYLILAA---I-GLASA-GM------------FWR-LLIGTMIMLVAGFMGE---A------G--Y-----------I----------------------DA------TVG-FIIGMLGWFYILYEI-----F--A-GDAGK-QAG--Q-ASAAV-Q-S-A-F-G-NM-RLVVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-a]_DQ203567 [III-Gamma4-a] MedHO1202G7_env_samples_DQ203567 gi|77547582|gb|DQ203567| Uncultured bacterium clone MedHO1202G7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202G7 predicted proteorhodopsin gene, partial cds DQ203567 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATCGATTGGCTGTTGACCGTTCCACTTCAAATGATTGAGTTCTATCTGATACTTGCTGCCATCGGTTTGGCATCAGCTGGAATGTTCTGGAGACTATTGATCGGCACAATGATCATGTTGGTTGCTGGTTTTATGGGCGAAGCTGGTTATATCGATGCTACAGTCGGATTTATCATAGGAATGCTGGGATGGTTCTACATTCTGTATGAAATTTTTGCTGGCGATGCGGGAAAACAGGCGGGACAAGCCTCAGCTGCAGTCCAGAGTGCATTTGGAAATATGCGCTTAGTGGTCACTATCGGTTGGGCCATATATCCA SYIDWLLTVPLQMIEFYLILAAIGLASAGMFWRLLIGTMIMLVAGFMGEAGYIDATVGFIIGMLGWFYILYEIFAGDAGKQAGQASAAVQSAFGNMRLVVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATCGATTGG------------------------CTGTTGACCGTTCCACTTCAAATGATTGAGTTCTATCTGATACTTGCTGCC---------ATC---GGTTTGGCATCAGCT---GGAATG------------------------------------TTCTGGAGA---CTATTGATCGGCACAATGATCATGTTGGTTGCTGGTTTTATGGGCGAA---------GCT------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------GATGCT------------------ACAGTCGGA---TTTATCATAGGAATGCTGGGATGGTTCTACATTCTGTATGAAATT---------------TTT------GCT---GGCGATGCGGGAAAA---CAGGCGGGA------CAA---GCCTCAGCTGCAGTC---CAG---AGT---GCA---TTT---GGA---AATATG---CGCTTAGTGGTCACTATC---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LLTVPLQMIEFYLILAA---I-GLASA-GM------------FWR-LLIGTMIMLVAGFMGE---A------G--Y-----------I----------------------DA------TVG-FIIGMLGWFYILYEI-----F--A-GDAGK-QAG--Q-ASAAV-Q-S-A-F-G-NM-RLVVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-a]_DQ203524 [III-Gamma4-a] MedHO1202C8_env_samples_DQ203524 gi|77547496|gb|DQ203524| Uncultured bacterium clone MedHO1202C8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202C8 predicted proteorhodopsin gene, partial cds DQ203524 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATCGATTGGCTGTTGACCGTTCCACTTCAAATGATTGAGTTCTATCTGATACTTGCTGCCATCGGTTTGGCATCAGCTGGAATGTTCTGGAGACTATTGATCGGCACAATGATCATGTTGGTTGCTGGTTTTATGGGCGAAGCTGGTTATATCGATGCTACCGTCGGATTTGTCATAGGAATGCTGGGATGGTTCTACATTCTGTATGAAATTTTTGCTGGCGATGCGGGAAAACAGGCGGGACAAGCCTCGGCTGCAGTCCAGAGTGCATTTGGAAACATGCGCTTAGTGGTCACTATCGGTTGGGCCATCTATCCA RYIDWLLTVPLQMIEFYLILAAIGLASAGMFWRLLIGTMIMLVAGFMGEAGYIDATVGFVIGMLGWFYILYEIFAGDAGKQAGQASAAVQSAFGNMRLVVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATCGATTGG------------------------CTGTTGACCGTTCCACTTCAAATGATTGAGTTCTATCTGATACTTGCTGCC---------ATC---GGTTTGGCATCAGCT---GGAATG------------------------------------TTCTGGAGA---CTATTGATCGGCACAATGATCATGTTGGTTGCTGGTTTTATGGGCGAA---------GCT------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------GATGCT------------------ACCGTCGGA---TTTGTCATAGGAATGCTGGGATGGTTCTACATTCTGTATGAAATT---------------TTT------GCT---GGCGATGCGGGAAAA---CAGGCGGGA------CAA---GCCTCGGCTGCAGTC---CAG---AGT---GCA---TTT---GGA---AACATG---CGCTTAGTGGTCACTATC---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQMIEFYLILAA---I-GLASA-GM------------FWR-LLIGTMIMLVAGFMGE---A------G--Y-----------I----------------------DA------TVG-FVIGMLGWFYILYEI-----F--A-GDAGK-QAG--Q-ASAAV-Q-S-A-F-G-NM-RLVVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-a]_DQ203400 [III-Gamma4-a] MedHO102F12_env_samples_DQ203400 gi|77547248|gb|DQ203400| Uncultured bacterium clone MedHO102F12 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102F12 predicted proteorhodopsin gene, partial cds DQ203400 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGATTGGCTGTTGACCGTTCCACTTCAGATGATTGAGTTCTATCTGATACTTGCTGCCATCGGTTTGGCATCAGCTGGAATGTTCTGGAGACTATTGATCGGCACAATGATCATGTTGGTTGCTGGTTTTATGGGCGAAGCTGGTTACATCAATGCTACAGTCGGATTTGTCATAGGAATGCTGGGATGGTTCTACATTCTGTATGAAATTTTTGCTGGCGATGCGGGAAAACAGGCGGGACAAGCCTCAGCTGCAGTCCAGAGTGCATTTGGAAATATGCGCTTAGTGGTCACTATCGGTTGGGCCATCTATCCA RYIDWLLTVPLQMIEFYLILAAIGLASAGMFWRLLIGTMIMLVAGFMGEAGYINATVGFVIGMLGWFYILYEIFAGDAGKQAGQASAAVQSAFGNMRLVVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGATTGG------------------------CTGTTGACCGTTCCACTTCAGATGATTGAGTTCTATCTGATACTTGCTGCC---------ATC---GGTTTGGCATCAGCT---GGAATG------------------------------------TTCTGGAGA---CTATTGATCGGCACAATGATCATGTTGGTTGCTGGTTTTATGGGCGAA---------GCT------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACAGTCGGA---TTTGTCATAGGAATGCTGGGATGGTTCTACATTCTGTATGAAATT---------------TTT------GCT---GGCGATGCGGGAAAA---CAGGCGGGA------CAA---GCCTCAGCTGCAGTC---CAG---AGT---GCA---TTT---GGA---AATATG---CGCTTAGTGGTCACTATC---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQMIEFYLILAA---I-GLASA-GM------------FWR-LLIGTMIMLVAGFMGE---A------G--Y-----------I----------------------NA------TVG-FVIGMLGWFYILYEI-----F--A-GDAGK-QAG--Q-ASAAV-Q-S-A-F-G-NM-RLVVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-a]_DQ203596 [III-Gamma4-a] medHO120B2_env_samples_DQ203596 gi|77547640|gb|DQ203596| Uncultured bacterium clone medHO120B2 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120B2 predicted proteorhodopsin gene, partial cds DQ203596 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGATTGGCTGTTGACCGTTCCACTTCAGATGATTGAGTTCTATCTGATACTTGCTGCCATCGGTTTGGCATCAGCTGGAATGTTCTGGAGACTATTGATCGGCACAATGATCATGTTGGTTGCTGGATTTATGGGCGAAGCTGGTTACATCAATGCTACAGTCGGATTTGTCATAGGAATGCTGGGATGGTTCTACATTCTGTATGAAATTTTTGCTGGCGATGCGGGAAAACAGGCGGGACAAGCCTCAGCTGCAGTCCAGAGTGCATTTGGAAATATGCGCTTAGTGGTCACTATCGGTTGGGCCATCTATCCA RYIDWLLTVPLQMIEFYLILAAIGLASAGMFWRLLIGTMIMLVAGFMGEAGYINATVGFVIGMLGWFYILYEIFAGDAGKQAGQASAAVQSAFGNMRLVVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGATTGG------------------------CTGTTGACCGTTCCACTTCAGATGATTGAGTTCTATCTGATACTTGCTGCC---------ATC---GGTTTGGCATCAGCT---GGAATG------------------------------------TTCTGGAGA---CTATTGATCGGCACAATGATCATGTTGGTTGCTGGATTTATGGGCGAA---------GCT------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACAGTCGGA---TTTGTCATAGGAATGCTGGGATGGTTCTACATTCTGTATGAAATT---------------TTT------GCT---GGCGATGCGGGAAAA---CAGGCGGGA------CAA---GCCTCAGCTGCAGTC---CAG---AGT---GCA---TTT---GGA---AATATG---CGCTTAGTGGTCACTATC---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQMIEFYLILAA---I-GLASA-GM------------FWR-LLIGTMIMLVAGFMGE---A------G--Y-----------I----------------------NA------TVG-FVIGMLGWFYILYEI-----F--A-GDAGK-QAG--Q-ASAAV-Q-S-A-F-G-NM-RLVVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-a]_DQ203433 [III-Gamma4-a] medHO10A10_env_samples_DQ203433 gi|77547314|gb|DQ203433| Uncultured bacterium clone medHO10A10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10A10 predicted proteorhodopsin gene, partial cds DQ203433 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGATTGGCTGTTGACCGTTCCACTTCAGATGATTGAGTTCTATCTGATACTTGCTGCCATCGGTTTGGCATCAGCTGGAATGTTCTGGAGACTATTGATCGGCACAATGATCATGTTGGTTGCTGGTTTTATGGGCGAAGCTGGTTACATCAATGCTACAGTCGGATTTGTCATAGGAATGCTGGGATGGTTCTACATTCTGTATGAAATTTTTGCTGGCGATGCGGGAAAACAGGCGGGACAAGCCTCAGCTGCAGTCCAGAGTGCATTTGGAAATATGCGCTTAGTGGTCACTATCGGTTGGGCCATCTATCCA SYIDWLLTVPLQMIEFYLILAAIGLASAGMFWRLLIGTMIMLVAGFMGEAGYINATVGFVIGMLGWFYILYEIFAGDAGKQAGQASAAVQSAFGNMRLVVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGATTGG------------------------CTGTTGACCGTTCCACTTCAGATGATTGAGTTCTATCTGATACTTGCTGCC---------ATC---GGTTTGGCATCAGCT---GGAATG------------------------------------TTCTGGAGA---CTATTGATCGGCACAATGATCATGTTGGTTGCTGGTTTTATGGGCGAA---------GCT------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACAGTCGGA---TTTGTCATAGGAATGCTGGGATGGTTCTACATTCTGTATGAAATT---------------TTT------GCT---GGCGATGCGGGAAAA---CAGGCGGGA------CAA---GCCTCAGCTGCAGTC---CAG---AGT---GCA---TTT---GGA---AATATG---CGCTTAGTGGTCACTATC---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LLTVPLQMIEFYLILAA---I-GLASA-GM------------FWR-LLIGTMIMLVAGFMGE---A------G--Y-----------I----------------------NA------TVG-FVIGMLGWFYILYEI-----F--A-GDAGK-QAG--Q-ASAAV-Q-S-A-F-G-NM-RLVVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-a]_DQ203443 [III-Gamma4-a] medHO10A9_env_samples_DQ203443 gi|77547334|gb|DQ203443| Uncultured bacterium clone medHO10A9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10A9 predicted proteorhodopsin gene, partial cds DQ203443 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGATTGGCTGTTGACCGTTCCACTTCAGATGATTGAGTTCTATCTGATACTTGCTGCCATCGGTTTGGCATCAGCTGGAATGTTCTGGAGACTATTGATCGGCACAATGATCATGTTGGTTGCTGGTTTTATGGGCGAAGCTGGTTACATCAATGCTACAGTCGGATTTGTCATAGGAATGCTGGGATGGTTCTACATTCTGTATGAAATTTTTGCTGGCGATGCGGGAAAACAGGCGGGACAAGCCTCAGCTGCAGTCCAGAGTGCATTTGGAAATATGCGCTTAGTGGTCACTATCGGTTGGGCCATCTATCCA SYIDWLLTVPLQMIEFYLILAAIGLASAGMFWRLLIGTMIMLVAGFMGEAGYINATVGFVIGMLGWFYILYEIFAGDAGKQAGQASAAVQSAFGNMRLVVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGATTGG------------------------CTGTTGACCGTTCCACTTCAGATGATTGAGTTCTATCTGATACTTGCTGCC---------ATC---GGTTTGGCATCAGCT---GGAATG------------------------------------TTCTGGAGA---CTATTGATCGGCACAATGATCATGTTGGTTGCTGGTTTTATGGGCGAA---------GCT------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACAGTCGGA---TTTGTCATAGGAATGCTGGGATGGTTCTACATTCTGTATGAAATT---------------TTT------GCT---GGCGATGCGGGAAAA---CAGGCGGGA------CAA---GCCTCAGCTGCAGTC---CAG---AGT---GCA---TTT---GGA---AATATG---CGCTTAGTGGTCACTATC---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LLTVPLQMIEFYLILAA---I-GLASA-GM------------FWR-LLIGTMIMLVAGFMGE---A------G--Y-----------I----------------------NA------TVG-FVIGMLGWFYILYEI-----F--A-GDAGK-QAG--Q-ASAAV-Q-S-A-F-G-NM-RLVVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-a]_DQ203405 [III-Gamma4-a] MedHO102F6_env_samples_DQ203405 gi|77547258|gb|DQ203405| Uncultured bacterium clone MedHO102F6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102F6 predicted proteorhodopsin gene, partial cds DQ203405 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGATTGGCTGTTGACCGTTCCACTTCAGATGATTGAGTTCTATCTGATACTTGCTGCCATCGGTTTGGCATCAGCTGGAATGTTCTGGAGACTATTGATCGGCACAATGATCATGTTGGTTGCTGGTTTTATGGGCGAAGCTGGTTACATCAATGCTACAGTCGGATTTGTCATAGGAATGCTGGGATGGTTCTACATTCTGTATGAAATTTTTGCTGGCGATGCGGGAAAACAGGCGGGACAAGCCTCAGCTGCAGTCCAGAGTGCATTTGGAAATATGCGCTTAGTGGTCACTATCGGTTGGGCCATCTACCCA SYIDWLLTVPLQMIEFYLILAAIGLASAGMFWRLLIGTMIMLVAGFMGEAGYINATVGFVIGMLGWFYILYEIFAGDAGKQAGQASAAVQSAFGNMRLVVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGATTGG------------------------CTGTTGACCGTTCCACTTCAGATGATTGAGTTCTATCTGATACTTGCTGCC---------ATC---GGTTTGGCATCAGCT---GGAATG------------------------------------TTCTGGAGA---CTATTGATCGGCACAATGATCATGTTGGTTGCTGGTTTTATGGGCGAA---------GCT------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACAGTCGGA---TTTGTCATAGGAATGCTGGGATGGTTCTACATTCTGTATGAAATT---------------TTT------GCT---GGCGATGCGGGAAAA---CAGGCGGGA------CAA---GCCTCAGCTGCAGTC---CAG---AGT---GCA---TTT---GGA---AATATG---CGCTTAGTGGTCACTATC---------------------------------------------------------------GGTTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LLTVPLQMIEFYLILAA---I-GLASA-GM------------FWR-LLIGTMIMLVAGFMGE---A------G--Y-----------I----------------------NA------TVG-FVIGMLGWFYILYEI-----F--A-GDAGK-QAG--Q-ASAAV-Q-S-A-F-G-NM-RLVVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-a]_DQ203479 [III-Gamma4-a] medHO10G11_env_samples_DQ203479 gi|77547406|gb|DQ203479| Uncultured bacterium clone medHO10G11 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10G11 predicted proteorhodopsin gene, partial cds DQ203479 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGATTGGCTGTTGACCGTTCCACTTCAGATGATTGAGTTCTATCTGATACTTGCTGCCATCGGTTTGGCATCAGCTGGAATGTTCTGGAGACTATTGATCGGCACAATGATCATGTTGGTTGCTGGTTTTATGGGCGAAGCTGGTTATATCGATGCTACAGTCGGATTTGTCATAGGGATGCTGGGATGGTTCTACATTCTGTATGAAATTTTTGCTGGCGATGCGGGAAAACAGGCGGGACAAGCCTCAGCTGCAGTCCAGAGTGCATTTGGAAATATGCGCTTAGTGGTCACTATCGGTTGGGCAATCTATCCA SYIDWLLTVPLQMIEFYLILAAIGLASAGMFWRLLIGTMIMLVAGFMGEAGYIDATVGFVIGMLGWFYILYEIFAGDAGKQAGQASAAVQSAFGNMRLVVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGATTGG------------------------CTGTTGACCGTTCCACTTCAGATGATTGAGTTCTATCTGATACTTGCTGCC---------ATC---GGTTTGGCATCAGCT---GGAATG------------------------------------TTCTGGAGA---CTATTGATCGGCACAATGATCATGTTGGTTGCTGGTTTTATGGGCGAA---------GCT------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------GATGCT------------------ACAGTCGGA---TTTGTCATAGGGATGCTGGGATGGTTCTACATTCTGTATGAAATT---------------TTT------GCT---GGCGATGCGGGAAAA---CAGGCGGGA------CAA---GCCTCAGCTGCAGTC---CAG---AGT---GCA---TTT---GGA---AATATG---CGCTTAGTGGTCACTATC---------------------------------------------------------------GGTTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LLTVPLQMIEFYLILAA---I-GLASA-GM------------FWR-LLIGTMIMLVAGFMGE---A------G--Y-----------I----------------------DA------TVG-FVIGMLGWFYILYEI-----F--A-GDAGK-QAG--Q-ASAAV-Q-S-A-F-G-NM-RLVVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-a]_EU079191 [III-Gamma4-a] NASB_33_env_samples_EU079191 gi|156106542|gb|EU079191| Uncultured organism clone NASB 33 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 33 putative proteorhodopsin gene, partial cds EU079191 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGCTACGTTGATTGGTTGTTGACCGTTCCACTTCAGATGATTGAGTTCTATCTGATACTTGCTGCCATCGGTTTGGCGTCAGCTGGAATGTTCTGGAGACTATTGATCGGCACAATGATCATGTTGGTCGCTGGTTTTATGGGCGAAGCTGGTTATATCGACGCTACAGTCGGATTTGTCATAGGAATTCTGGGATGGTTCTACATTCTGTATGAAATTTTTGCTGGCGACGCCGGAAAACAGGCGGGACAAGCCTCAGCTGCAATCCAGAGTGCATTTGGAAATATGCGCTTAGTGGTTACTATTGGATGGGCTATCTAT RYVDWLLTVPLQMIEFYLILAAIGLASAGMFWRLLIGTMIMLVAGFMGEAGYIDATVGFVIGILGWFYILYEIFAGDAGKQAGQASAAIQSAFGNMRLVVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTACGTTGATTGG------------------------TTGTTGACCGTTCCACTTCAGATGATTGAGTTCTATCTGATACTTGCTGCC---------ATC---GGTTTGGCGTCAGCT---GGAATG------------------------------------TTCTGGAGA---CTATTGATCGGCACAATGATCATGTTGGTCGCTGGTTTTATGGGCGAA---------GCT------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------GACGCT------------------ACAGTCGGA---TTTGTCATAGGAATTCTGGGATGGTTCTACATTCTGTATGAAATT---------------TTT------GCT---GGCGACGCCGGAAAA---CAGGCGGGA------CAA---GCCTCAGCTGCAATC---CAG---AGT---GCA---TTT---GGA---AATATG---CGCTTAGTGGTTACTATT---------------------------------------------------------------GGATGG---------GCTATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLQMIEFYLILAA---I-GLASA-GM------------FWR-LLIGTMIMLVAGFMGE---A------G--Y-----------I----------------------DA------TVG-FVIGILGWFYILYEI-----F--A-GDAGK-QAG--Q-ASAAI-Q-S-A-F-G-NM-RLVVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Gamma4-a]_DQ203406 [III-Gamma4-a] MedHO102F7_env_samples_DQ203406 gi|77547260|gb|DQ203406| Uncultured bacterium clone MedHO102F7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102F7 predicted proteorhodopsin gene, partial cds DQ203406 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGATTGGCTGTTGACCGTTCCACTTCAAATGATTGAGTTCTATCTGATACTTGCTGCCATCGGTTTGGCATCAGCTGGAATGTTCTGGAGACTATTGATCGGCACAATGATCATGTTGGTTGCTGGTTTTATGGGCGAAGCTGGTTATATCGATGCCACAGTCGGATTTGTCATAGGAATGCTGGGATGGTTCTACATTCTGTATGAAATTTTTGCTGGCGATGCGGGAAAACAGGCGGGACAAGCCTCAGCTGCAGTCCAGAGTGCATTTGGAAATATGCGCTTGGTAGTCACTATCGGTTGGGCCATATACCCA RYIDWLLTVPLQMIEFYLILAAIGLASAGMFWRLLIGTMIMLVAGFMGEAGYIDATVGFVIGMLGWFYILYEIFAGDAGKQAGQASAAVQSAFGNMRLVVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGATTGG------------------------CTGTTGACCGTTCCACTTCAAATGATTGAGTTCTATCTGATACTTGCTGCC---------ATC---GGTTTGGCATCAGCT---GGAATG------------------------------------TTCTGGAGA---CTATTGATCGGCACAATGATCATGTTGGTTGCTGGTTTTATGGGCGAA---------GCT------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------GATGCC------------------ACAGTCGGA---TTTGTCATAGGAATGCTGGGATGGTTCTACATTCTGTATGAAATT---------------TTT------GCT---GGCGATGCGGGAAAA---CAGGCGGGA------CAA---GCCTCAGCTGCAGTC---CAG---AGT---GCA---TTT---GGA---AATATG---CGCTTGGTAGTCACTATC---------------------------------------------------------------GGTTGG---------GCCATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQMIEFYLILAA---I-GLASA-GM------------FWR-LLIGTMIMLVAGFMGE---A------G--Y-----------I----------------------DA------TVG-FVIGMLGWFYILYEI-----F--A-GDAGK-QAG--Q-ASAAV-Q-S-A-F-G-NM-RLVVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-a]_KJ926129 [III-Gamma4-a] BOUM_OTU042_env_samples gb|KJ926129| Uncultured bacterium clone BOUM OTU042 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU042 putative proteorhodopsin gene, partial cds KJ926129 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 38.6308 7.9097 #na #na #na #na #na ATTGATTGGTTACTCACTGTTCCTCTTCAGATGATTGAGTTTTATCTGATATTGGCGGCTATCGGTTTGGCTTCAGCTGGAATGTTCTGGAGACTACTAGTCGGTACAATGATTATGTTAATTGCTGGTTTCATGGGCGAAGCTGGATATATCGATGCTACGGTCGGATTCGTTATAGGTATGTTGGGATGGTTTTATATCCTATACGAAATTTTCGCCGGCGATGCTGGTAAACAAGCCGGACAAGCGTCACCTGCAGTGCAAAGCGCATTTGGAAATATGCGGTTAGTCGTAACAATTGGCTGGGCCATCTAC IDWLLTVPLQMIEFYLILAAIGLASAGMFWRLLVGTMIMLIAGFMGEAGYIDATVGFVIGMLGWFYILYEIFAGDAGKQAGQASPAVQSAFGNMRLVVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGATTGG------------------------TTACTCACTGTTCCTCTTCAGATGATTGAGTTTTATCTGATATTGGCGGCT---------ATC---GGTTTGGCTTCAGCT---GGAATG------------------------------------TTCTGGAGA---CTACTAGTCGGTACAATGATTATGTTAATTGCTGGTTTCATGGGCGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------GATGCT------------------ACGGTCGGA---TTCGTTATAGGTATGTTGGGATGGTTTTATATCCTATACGAAATT---------------TTC------GCC---GGCGATGCTGGTAAA---CAAGCCGGA------CAA---GCGTCACCTGCAGTG---CAA---AGC---GCA---TTT---GGA---AATATG---CGGTTAGTCGTAACAATT---------------------------------------------------------------GGCTGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDW--------LLTVPLQMIEFYLILAA---I-GLASA-GM------------FWR-LLVGTMIMLIAGFMGE---A------G--Y-----------I----------------------DA------TVG-FVIGMLGWFYILYEI-----F--A-GDAGK-QAG--Q-ASPAV-Q-S-A-F-G-NM-RLVVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Gamma4-a]_1105113525046 [III-Gamma4-a] JCVI_ORF_1105113525046_GS047_Open_Ocean_30m jcvi|1105113525046| 1105113525046 JCVI ORF 1105113525046 1105113525046 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 28-mars-04 Open_Ocean/30m_depth/S_37.3_psu/GS047/201_miles_from_F._Polynesia/Tropical_South_Pacific Pacific Ocean marine -10.131389 -135.44945 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGACATTAACAAAACTATTAAAGGGCTTAGTCCCCGTAGGTCTGCTGTCAGCGCTGCCATCATCAGCGTTCGCTACGGCCAACTTGGCGTCAGACGATTTCGTTGGAATATCGTTCTGGCTGATTTCTATGGCCATGTTGTCAGCTACAATCTTCTTCCTTTGGGAAGTTCAGAATGTAGAAGGCAAATGGAAGACATCCCTCGTTGTGGGAGCACTGGTTTGCTTCATCGCAGCGGTGCATTATTTCTACATGCGCGATGTTTGGGTGGCTACAGGTGAAACTCCAACAGTCTATAGATATATAGATTGGTTATTAACCGTGCCACTACAGATGATCGAGTTTTACTTGATTCTCGCTGCCATAGGAATCGCGTCTGCTGGAATGTTCTGGAGATTACTAATAGGTACAATGGTTATGTTAGTTGCTGGTTTCATGGGCGAAGCTGGGTACATTGATGCGACTGTTGGATTTATCGTCGGAATGTTGGGATGGTTCTACATTCTTTACGAAATCTTCGCCGGAGAGGCTGGAAAACAGGCGGGGACAGCATCAGATGCAATTCAAAGTGCCTTTGGGAACATGCGTTTAGTAGTAACCATCGGTTGGGCGATTTATCCGCTTGGATATGTATTAGGTTATTTCGTCATGGTAGATGCTTCTGGAGCGACTACTGCGGCGGCAAGTCAGACCCTTAATGTCGTCTATAACCTGGCTGATATTGTCAATAAGCTGGCATTCTGCTTACTTGTTTGGTATGCCGCTACTTCTGACAACAAAAATCTTAATCCTGCTGCAGCC MTLTKLLKGLVPVGLLSALPSSAFATANLASDDFVGISFWLISMAMLSATIFFLWEVQNVEGKWKTSLVVGALVCFIAAVHYFYMRDVWVATGETPTVYRYIDWLLTVPLQMIEFYLILAAIGIASAGMFWRLLIGTMVMLVAGFMGEAGYIDATVGFIVGMLGWFYILYEIFAGEAGKQAGTASDAIQSAFGNMRLVVTIGWAIYPLGYVLGYFVMVDASGATTAAASQTLNVVYNLADIVNKLAFCLLVWYAATSDNKNLNPAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGACATTAACAAAACTATTAAAGGGCTTAGTCCCCGTAGGTCTGCTGTCAGCGCTGCCATCATCAGCGTTCGCTACGGCCAACTTGGCGTCAGACGATTTCGTTGGAATATCGTTCTGGCTGATTTCTATGGCCATGTTGTCAGCTACAATCTTCTTCCTTTGGGAAGTTCAGAATGTAGAAGGC---AAATGGAAGACATCCCTCGTTGTGGGAGCACTGGTTTGCTTCATCGCAGCGGTGCATTATTTCTACATGCGCGATGTTTGGGTG---------------------------------------------------GCTACAGGTGAAACTCCAACAGTCTATAGATATATAGATTGG------------------------TTATTAACCGTGCCACTACAGATGATCGAGTTTTACTTGATTCTCGCTGCC---------ATA---GGAATCGCGTCTGCT---GGAATG------------------------------------TTCTGGAGA---TTACTAATAGGTACAATGGTTATGTTAGTTGCTGGTTTCATGGGCGAA---------GCT------------------GGG------TAC---------------------------------ATT------------------------------------------------------------------GATGCG------------------ACTGTTGGA---TTTATCGTCGGAATGTTGGGATGGTTCTACATTCTTTACGAAATC---------------TTC------GCC---GGAGAGGCTGGAAAA---CAGGCGGGG------ACA---GCATCAGATGCAATT---CAA---AGT---GCC---TTT---GGG---AACATG---CGTTTAGTAGTAACCATC---------------------------------------------------------------GGTTGG---------GCGATTTATCCGCTTGGATATGTATTAGGTTATTTCGTC---ATGGTA---------GAT---GCTTCTGGAGCGACTACTGCGGCGGCAAGTCAGACCCTTAATGTCGTCTATAACCTGGCTGATATTGTCAATAAGCTGGCATTCTGCTTACTTGTTTGGTATGCCGCTACTTCTGACAACAAAAATCTTAATCCTGCTGCAGCC--------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------MTLTKLLKGLVPVGLLSALPSSAFATANLASDDFVGISFWLISMAMLSATIFFLWEVQNVEG-KWKTSLVVGALVCFIAAVHYFYMRDVWV-----------------ATGETPTVYRYIDW--------LLTVPLQMIEFYLILAA---I-GIASA-GM------------FWR-LLIGTMVMLVAGFMGE---A------G--Y-----------I----------------------DA------TVG-FIVGMLGWFYILYEI-----F--A-GEAGK-QAG--T-ASDAI-Q-S-A-F-G-NM-RLVVTI---------------------GW---AIYPLGYVLGYFV-MV---D-ASGATTAAASQTLNVVYNLADIVNKLAFCLLVWYAATSDNKNLNPAAA--------------------------------- [III-Gamma4-a]_1105149995726 [III-Gamma4-a] JCVI_ORF_1105149995726_GS028_Coastal_2m jcvi|1105149995726| 1105149995726 JCVI ORF 1105149995726 1105149995726 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 04-FEB-2004 Coastal/2m_depth/S_n.a/GS028/Coastal_Floreana/Galapagos_Islands Pacific Ocean marine -1.2169445 -90.319725 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TTGCAGTCTGATGACTTCGTAGGTATTTCATTTTGGTTGATATCGATGGCTCTCATGGCATCGACAGTCTTTTTCCTTTGGGAAACACAGGCAGTCAGCGCAAAATGGAAAACATCCCTCGTAGTATCCGCTCTGGTGACATTCATCGCAGCAGTGCACTATTTCTACATGCGGGATGTCTGGGTGGCAACTGGTGAAACACCTACCGTTTATCGATACATTGACTGGTTACTAACCGTACCTCTGTTGATGATCGAATTCTTCCTAATACTTCGGGCAATTGGTAGCCCTTCAGCAGGCATCTTCTGGCGCCTCTTGATTGGTACCTTAGTAATGCTTGTTCCCGGGTACATGGGCGAAGCGGGTTACATCGATGTCTACGTCGGATTCGGCATAGGTATCTTGGGTTGGATTTACATCCTGTATGAAATTTTCGCAGGAGAAGCTGGAAAAATGGCTGCAGATCAAGCCACACCAGCGGTAAAAAGCGCCTATGGAACCATGCGGTGGATAGTAACCATCGGTTGGGCAATTTATCCCCTAGGGTATGTTTTAGGGTATTTCGTAAACGTCGATGCTACTGGAGCGCCTACTCAGTCTGCTTCAGAAATGCTGAATATCGTTTACAACCTTGCTGACGTAGTCAACAAGATTGCCTTTGGATTATTGATCTGGTACGCAGCAACATCATCATCTGATAGCACTGCC LQSDDFVGISFWLISMALMASTVFFLWETQAVSAKWKTSLVVSALVTFIAAVHYFYMRDVWVATGETPTVYRYIDWLLTVPLLMIEFFLILRAIGSPSAGIFWRLLIGTLVMLVPGYMGEAGYIDVYVGFGIGILGWIYILYEIFAGEAGKMAADQATPAVKSAYGTMRWIVTIGWAIYPLGYVLGYFVNVDATGAPTQSASEMLNIVYNLADVVNKIAFGLLIWYAATSSSDSTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAGTCTGATGACTTCGTAGGTATTTCATTTTGGTTGATATCGATGGCTCTCATGGCATCGACAGTCTTTTTCCTTTGGGAAACACAGGCAGTCAGCGCA---AAATGGAAAACATCCCTCGTAGTATCCGCTCTGGTGACATTCATCGCAGCAGTGCACTATTTCTACATGCGGGATGTCTGGGTG------------------------------GCAACT---------------------GGTGAAACACCTACCGTTTATCGATACATTGACTGG------------------------TTACTAACCGTACCTCTGTTGATGATCGAATTCTTCCTAATACTTCGGGCA---------ATT---GGTAGCCCTTCAGCA---GGCATC------------------------------------TTCTGGCGC---CTCTTGATTGGTACCTTAGTAATGCTTGTTCCCGGGTACATGGGCGAA---------GCG------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------GATGTC------------------TACGTCGGA---TTCGGCATAGGTATCTTGGGTTGGATTTACATCCTGTATGAAATT---------------TTC------GCA---GGAGAAGCTGGAAAAATGGCTGCAGAT------CAA---GCCACACCAGCGGTA---AAA---AGC---GCC---TAT---GGA---ACCATG---CGGTGGATAGTAACCATC---------------------------------------------------------------GGTTGG---------GCAATTTATCCCCTAGGGTATGTTTTAGGGTATTTCGTA---AACGTC---------GAT---GCTACTGGAGCGCCTACTCAGTCTGCTTCAGAAATGCTGAATATCGTTTACAACCTTGCTGACGTAGTCAACAAGATTGCCTTTGGATTATTGATCTGGTACGCAGCAACATCATCA---TCTGATAGCACTGCC------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------LQSDDFVGISFWLISMALMASTVFFLWETQAVSA-KWKTSLVVSALVTFIAAVHYFYMRDVWV----------AT-------GETPTVYRYIDW--------LLTVPLLMIEFFLILRA---I-GSPSA-GI------------FWR-LLIGTLVMLVPGYMGE---A------G--Y-----------I----------------------DV------YVG-FGIGILGWIYILYEI-----F--A-GEAGKMAAD--Q-ATPAV-K-S-A-Y-G-TM-RWIVTI---------------------GW---AIYPLGYVLGYFV-NV---D-ATGAPTQSASEMLNIVYNLADVVNKIAFGLLIWYAATSS-SDSTA------------------------------------ [III-Gamma4-Vibrio]_FJ985782 [III-Gamma4-Vibrio] Vibrio_campbellii_BAA-1116_FJ985782 gi|289157784|gb|FJ985782| Vibrio campbellii strain BAA-1116 proteorhodopsin and retinal biosynthesis region genomic sequence. Vibrio campbellii strain BAA-1116 proteorhodopsin and retinal biosynthesis region genomic sequence. FJ985782 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Glaciecola-like Vibrio-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Glaciecola-like Vibrio-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Gammaproteobacteria/Vibrionales/Vibrionaceae/Vibrio] taxon:680 genomic DNA strain 12-juil-12 #na #na #na #na #na Function and Regulation of Vibrio campbellii Proteorhodopsin: Acquired Phototrophy in a Classical Organoheterotroph Wang,Z., OShaughnessy,T.J., Soto,C.M., Rahbar,A.M., Robertson,K.L., Lebedev,N. and Vora,G.J. PLoS ONE 7 (6), E38749 (2012) 22741028 #na TTCCATCGATTTAAGCAACAAAGCCATTTCAAAGCCTCCTCTGGACATCGTGATTATGTCAACTATTATTTTTTTGAGCATTACTTATTGATCATTCAAAGTAATTTTTTCGTAACCAACTTTGAGAAGCGAGATAGTTTTAAACGTGTGGTCCTCGCAAAACCAACTGCAACAAGTGAGACTATTATGGAAAATCTGGTTAAAAATTTTATACCGCTCCTTAAATGGAATCGTCAGCATAACTTGCACTTCAAGATACCACTAGTCGCATCCGCTACAGTTTTCCCAAATGCAGCAAATGCGGCAGCCAATTTGCAACCAAATGACTTTGTTGGTATTTCATTCTGGTTAATCTCGATGGCCTTGATGGCTTCAACTGTCTTTTTCTTGTGGGAAACGCAGGGAGTAACAGCGAAGTGGAAGACATCATTGACCGTTTCTGCATTGGTCACTTTGATAGCAGCAGTTCATTATTTCTACATGAGAGATGTTTGGGTCGCCACAGGCGAAACTCCAACGGTCTACCGCTATATCGATTGGCTACTTACCGTCCCACTGCTGATGATTGAGTTTTACCTTATACTTCGTGCCATTGGTGCAGCCTCTGCTGGTATATTCTGGCGCCTTCTTGTCGGTACTCTGATTATGCTAATTGCAGGCTTTTTGGGTGAAGTCGGTTATATCAGCGTTACAGTGGGCTTCGTCATCGGCATGCTGGGGTGGTTCTACATCCTGTACGAAATATTCCTCGGTGAAGCAGGCAAAGCAGCGAAGCACCAAGCTAGCGATTCAGTGAAATTTGCTTACAATCTTATGCGTTGGATCGTGACTGTTGGTTGGGCGATTTATCCTCTCGGTTATGTTTTGGGGTACATGATGGGAGCGGTTGATGACGCTTCTCTGAACTTAGTTTACAACCTAGCCGACGTGGTGAATAAAATAGCGTTTGGCCTGTTAATTTGGTACGCGGCGACCTCGGAAAGTCAGGACGCCAAGGGA FHRFKQQSHFKASSGHRDYVNYYFFEHYLLIIQSNFFVTNFEKRDSFKRVVLAKPTATSETIMENLVKNFIPLLKWNRQHNLHFKIPLVASATVFPNAANAAANLQPNDFVGISFWLISMALMASTVFFLWETQGVTAKWKTSLTVSALVTLIAAVHYFYMRDVWVATGETPTVYRYIDWLLTVPLLMIEFYLILRAIGAASAGIFWRLLVGTLIMLIAGFLGEVGYISVTVGFVIGMLGWFYILYEIFLGEAGKAAKHQASDSVKFAYNLMRWIVTVGWAIYPLGYVLGYMMGAVDDASLNLVYNLADVVNKIAFGLLIWYAATSESQDAKG TTCCATCGATTT---------------------------------------------AAGCAACAAAGCCATTTCAAAGCCTCCTCTGGACATCGTGATTATGTCAACTATTATTTTTTTGAGCATTACTTATTGATCATTCAAAGTAATTTTTTCGTAACCAACTTTGAGAAGCGAGATAGTTTTAAACGTGTGGTCCTCGCAAAACCAACTGCAACAAGTGAGACTATTATGGAAAATCTGGTTAAAAATTTTATACCGCTCCTTAAATGGAATCGTCAGCATAACTTGCACTTCAAGATACCACTAGTCGCATCCGCTACAGTTTTCCCAAATGCAGCAAATGCGGCAGCCAATTTGCAACCAAATGACTTTGTTGGTATTTCATTCTGGTTAATCTCGATGGCCTTGATGGCTTCAACTGTCTTTTTCTTGTGGGAAACGCAGGGAGTAACAGCG---AAGTGGAAGACATCATTGACCGTTTCTGCATTGGTCACTTTGATAGCAGCAGTTCATTATTTCTACATGAGAGATGTTTGGGTC------------------------------GCCACA---------------------GGCGAAACTCCAACGGTCTACCGCTATATCGATTGG------------------------CTACTTACCGTCCCACTGCTGATGATTGAGTTTTACCTTATACTTCGTGCC---------ATT---GGTGCAGCCTCTGCT---GGTATA------------------------------------TTCTGGCGC---CTTCTTGTCGGTACTCTGATTATGCTAATTGCAGGCTTTTTGGGTGAA---------GTC------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------AGCGTT------------------ACAGTGGGC---TTCGTCATCGGCATGCTGGGGTGGTTCTACATCCTGTACGAAATA---------------TTC------CTC---GGTGAAGCAGGCAAAGCAGCGAAGCAC------CAA---GCTAGCGATTCAGTG---AAA---TTT---GCT---TAC---AAT---CTTATG---CGTTGGATCGTGACTGTT---------------------------------------------------------------GGTTGG---------GCGATTTATCCTCTCGGTTATGTTTTGGGGTACATG---------------------------------------ATGGGAGCGGTTGATGACGCTTCTCTGAACTTAGTTTACAACCTAGCCGACGTGGTGAATAAAATAGCGTTTGGCCTGTTAATTTGGTACGCGGCGACCTCGGAA---AGTCAGGACGCCAAGGGA--------------------------------------------------------------------------------------------------------- FHRF---------------KQQSHFKASSGHRDYVNYYFFEHYLLIIQSNFFVTNFEKRDSFKRVVLAKPTATSETIMENLVKNFIPLLKWNRQHNLHFKIPLVASATVFPNAANAAANLQPNDFVGISFWLISMALMASTVFFLWETQGVTA-KWKTSLTVSALVTLIAAVHYFYMRDVWV----------AT-------GETPTVYRYIDW--------LLTVPLLMIEFYLILRA---I-GAASA-GI------------FWR-LLVGTLIMLIAGFLGE---V------G--Y-----------I----------------------SV------TVG-FVIGMLGWFYILYEI-----F--L-GEAGKAAKH--Q-ASDSV-K-F-A-Y-N-LM-RWIVTV---------------------GW---AIYPLGYVLGYM-------------MGAVDDASLNLVYNLADVVNKIAFGLLIWYAATSE-SQDAKG----------------------------------- [III-Gamma4-Vibrio]_CP000789 [III-Gamma4-Vibrio] Vibrio_harveyi_ATCC_BAA_1116_complete_cds_CP000789 gi|156523975|gb|CP000789| Vibrio harveyi ATCC BAA1116 chromosome I, complete sequence Vibrio harveyi ATCC BAA1116 chromosome I, complete sequence CP000789 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Glaciecola-like Vibrio-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Glaciecola-like Vibrio-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Gammaproteobacteria/Vibrionales/Vibrionaceae/Vibrio] taxon:338187 genomic_DNA strain 31-janv-14 #na #na #na #na #na Direct Submission Bassler,B., Clifton,S.W., Fulton,L., Delehaunty,K., Fronick,C., Harrison,M., Markivic,C., Fulton,R., TinWollam,A.M., Shah,N., Pepin,K., Nash,W., Thiruvilangam,P., Bhonagiri,V., Waters,C., Tu,K.C., Irgon,J. and Wilson,R.K. Submitted (16AUG2007) Genetics, Genome Sequencing Center, 4444 Forest Park Parkway, St. Louis, MO 63108, USA #na #na TTGATCATTCAAAGTAATTTTTTCGTAACCAACTTTGAGAAGCGAGATAGTTTTAAACGTGTGGTCCTCGCAAAACCAACTGCAACAAGTGAGACTATTATGGAAAATCTGGTTAAAAATTTTATACCGCTCCTTAAATGGAATCGTCAGCATAACTTGCACTTCAAGATACCACTAGTCGCATCCGCTACAGTTTTCCCAAATGCAGCAAATGCGGCAGCCAATTTGCAACCAAATGACTTTGTTGGTATTTCATTCTGGTTAATCTCGATGGCCTTGATGGCTTCAACTGTCTTTTTCTTGTGGGAAACGCAGGGAGTAACAGCGAAGTGGAAGACATCATTGACCGTTTCTGCATTGGTCACTTTGATAGCAGCAGTTCATTATTTCTACATGAGAGATGTTTGGGTCGCCACAGGCGAAACTCCAACGGTCTACCGCTATATCGATTGGCTACTTACCGTCCCACTGCTGATGATTGAGTTTTACCTTATACTTCGTGCCATTGGTGCAGCCTCTGCTGGTATATTCTGGCGCCTTCTTGTCGGTACTCTGATTATGCTAATTGCAGGCTTTTTGGGTGAAGTCGGTTATATCAGCGTTACAGTGGGCTTCGTCATCGGCATGCTGGGGTGGTTCTACATCCTGTACGAAATATTCCTCGGTGAAGCAGGCAAAGCAGCGAAGCACCAAGCTAGCGATTCAGTGAAATTTGCTTACAATCTTATGCGTTGGATCGTGACTGTTGGTTGGGCGATTTATCCTCTCGGTTATGTTTTGGGGTACATGATGGGAGCGGTTGATGACGCTTCTCTGAACTTAGTTTACAACCTAGCCGACGTGGTGAATAAAATAGCGTTTGGCCTGTTAATTTGGTACGCGGCGACCTCGGAAAGTCAGGACGCCAAGGGA LIIQSNFFVTNFEKRDSFKRVVLAKPTATSETIMENLVKNFIPLLKWNRQHNLHFKIPLVASATVFPNAANAAANLQPNDFVGISFWLISMALMASTVFFLWETQGVTAKWKTSLTVSALVTLIAAVHYFYMRDVWVATGETPTVYRYIDWLLTVPLLMIEFYLILRAIGAASAGIFWRLLVGTLIMLIAGFLGEVGYISVTVGFVIGMLGWFYILYEIFLGEAGKAAKHQASDSVKFAYNLMRWIVTVGWAIYPLGYVLGYMMGAVDDASLNLVYNLADVVNKIAFGLLIWYAATSESQDAKG ------------------------------------------------------------------------------------------------------------------------------------TTGATCATTCAAAGTAATTTTTTCGTAACCAACTTTGAGAAGCGAGATAGTTTTAAACGTGTGGTCCTCGCAAAACCAACTGCAACAAGTGAGACTATTATGGAAAATCTGGTTAAAAATTTTATACCGCTCCTTAAATGGAATCGTCAGCATAACTTGCACTTCAAGATACCACTAGTCGCATCCGCTACAGTTTTCCCAAATGCAGCAAATGCGGCAGCCAATTTGCAACCAAATGACTTTGTTGGTATTTCATTCTGGTTAATCTCGATGGCCTTGATGGCTTCAACTGTCTTTTTCTTGTGGGAAACGCAGGGAGTAACAGCG---AAGTGGAAGACATCATTGACCGTTTCTGCATTGGTCACTTTGATAGCAGCAGTTCATTATTTCTACATGAGAGATGTTTGGGTC------------------------------GCCACA---------------------GGCGAAACTCCAACGGTCTACCGCTATATCGATTGG------------------------CTACTTACCGTCCCACTGCTGATGATTGAGTTTTACCTTATACTTCGTGCC---------ATT---GGTGCAGCCTCTGCT---GGTATA------------------------------------TTCTGGCGC---CTTCTTGTCGGTACTCTGATTATGCTAATTGCAGGCTTTTTGGGTGAA---------GTC------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------AGCGTT------------------ACAGTGGGC---TTCGTCATCGGCATGCTGGGGTGGTTCTACATCCTGTACGAAATA---------------TTC------CTC---GGTGAAGCAGGCAAAGCAGCGAAGCAC------CAA---GCTAGCGATTCAGTG---AAA---TTT---GCT---TAC---AAT---CTTATG---CGTTGGATCGTGACTGTT---------------------------------------------------------------GGTTGG---------GCGATTTATCCTCTCGGTTATGTTTTGGGGTACATG---------------------------------------ATGGGAGCGGTTGATGACGCTTCTCTGAACTTAGTTTACAACCTAGCCGACGTGGTGAATAAAATAGCGTTTGGCCTGTTAATTTGGTACGCGGCGACCTCGGAA---AGTCAGGACGCCAAGGGA--------------------------------------------------------------------------------------------------------- --------------------------------------------LIIQSNFFVTNFEKRDSFKRVVLAKPTATSETIMENLVKNFIPLLKWNRQHNLHFKIPLVASATVFPNAANAAANLQPNDFVGISFWLISMALMASTVFFLWETQGVTA-KWKTSLTVSALVTLIAAVHYFYMRDVWV----------AT-------GETPTVYRYIDW--------LLTVPLLMIEFYLILRA---I-GAASA-GI------------FWR-LLVGTLIMLIAGFLGE---V------G--Y-----------I----------------------SV------TVG-FVIGMLGWFYILYEI-----F--L-GEAGKAAKH--Q-ASDSV-K-F-A-Y-N-LM-RWIVTV---------------------GW---AIYPLGYVLGYM-------------MGAVDDASLNLVYNLADVVNKIAFGLLIWYAATSE-SQDAKG----------------------------------- [III-Gamma4-Vibrio]_NZ_AGIE01000055 [III-Gamma4-Vibrio] 388570911_138470_139417_Vibrio_campbellii_DS40M4_contig00061_WGS gi|388570911|gb|NZ_AGIE01000055| Vibrio campbellii DS40M4 contig00061, whole genome shotgun sequence Vibrio campbellii DS40M4 contig00061, whole genome shotgun sequence NZ_AGIE01000055 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Glaciecola-like Vibrio-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Glaciecola-like Vibrio-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Gammaproteobacteria/Vibrionales/Vibrionaceae/Vibrio] taxon:1088888 genomic_DNA strain 12-May-2013 #na #na Atlantic Ocean marine 20.683 -24.218 #na #na #na #na #na ATGTCAACTATTATTTTTTTTGAGCATTACTTATTGATCATTCAAAGTAATTTTTTCGTAACCAACTTTGAGAAGCGAGATAGTTTTAAACGTGTGGTCCTCGCAAAACCAACTGCAACAAGTGAGACTATTATGGAAAATCTGGTTAAAAATTTTATACCGCTCCTTAAATGGAATCGTCAGCATAACTTGCACTTCAAGATACCACTAGTCGCAGCCGCTACCGTTTTCCCAAATGCAGCAAATGCGGCAGCCAATTTGCAACCCAATGATTTTGTTGGTATTTCCTTCTGGTTAATCTCGATGGCCTTGATGGCTTCAACTGTCTTCTTCTTGTGGGAAACTCAGGGAGTAACAGCGAAGTGGAAGACATCATTGACCGTTTCTGCTTTGGTAACTTTGATAGCCGCAGTTCATTATTTCTATATGAGGGATGTTTGGGTCGCTACAGGCGAAACTCCAACTGTCTACCGCTATATTGATTGGCTACTTACCGTCCCACTGCTGATGATTGAGTTTTACCTCATACTTCGTGCTATAGGTGCAGCCTCCGCTGGTATATTCTGGCGCCTTCTTGTCGGTACTCTGGTTATGCTAATTGCAGGCTTTTTGGGTGAAGTTGGTCATATCAGTGTTACAGTGGGCTTCGTCATCGGCATGCTGGGGTGGTTCTACATCCTGTACGAAATATTCCTCGGTGAAGCAGGCAAAGCAGCGAAGCACCAAGCCAGCGATTCAGTGAAATTTGCTTACAATCTTATGCGTTGGATCGTGACTGTTGGTTGGGCGATTTATCCTCTCGGTTATGTTTTGGGGTACATGATGGGAGCGGTTGATGACGCTTCTCTGAACTTAGTTTACAACCTAGCCGACGTGGTGAATAAAATAGCGTTTGGTCTGTTAATTTGGTACGCGGCGACCTCGGAAAGTCAGGACGCCAAGGGA MSTIIFFEHYLLIIQSNFFVTNFEKRDSFKRVVLAKPTATSETIMENLVKNFIPLLKWNRQHNLHFKIPLVAAATVFPNAANAAANLQPNDFVGISFWLISMALMASTVFFLWETQGVTAKWKTSLTVSALVTLIAAVHYFYMRDVWVATGETPTVYRYIDWLLTVPLLMIEFYLILRAIGAASAGIFWRLLVGTLVMLIAGFLGEVGHISVTVGFVIGMLGWFYILYEIFLGEAGKAAKHQASDSVKFAYNLMRWIVTVGWAIYPLGYVLGYMMGAVDDASLNLVYNLADVVNKIAFGLLIWYAATSESQDAKG ---------------------------------------------------------------------------------------------------ATGTCAACTATTATTTTTTTTGAGCATTACTTATTGATCATTCAAAGTAATTTTTTCGTAACCAACTTTGAGAAGCGAGATAGTTTTAAACGTGTGGTCCTCGCAAAACCAACTGCAACAAGTGAGACTATTATGGAAAATCTGGTTAAAAATTTTATACCGCTCCTTAAATGGAATCGTCAGCATAACTTGCACTTCAAGATACCACTAGTCGCAGCCGCTACCGTTTTCCCAAATGCAGCAAATGCGGCAGCCAATTTGCAACCCAATGATTTTGTTGGTATTTCCTTCTGGTTAATCTCGATGGCCTTGATGGCTTCAACTGTCTTCTTCTTGTGGGAAACTCAGGGAGTAACAGCG---AAGTGGAAGACATCATTGACCGTTTCTGCTTTGGTAACTTTGATAGCCGCAGTTCATTATTTCTATATGAGGGATGTTTGGGTC------------------------------GCTACA---------------------GGCGAAACTCCAACTGTCTACCGCTATATTGATTGG------------------------CTACTTACCGTCCCACTGCTGATGATTGAGTTTTACCTCATACTTCGTGCT---------ATA---GGTGCAGCCTCCGCT---GGTATA------------------------------------TTCTGGCGC---CTTCTTGTCGGTACTCTGGTTATGCTAATTGCAGGCTTTTTGGGTGAA---------GTT------------------GGT------CAT---------------------------------ATC------------------------------------------------------------------AGTGTT------------------ACAGTGGGC---TTCGTCATCGGCATGCTGGGGTGGTTCTACATCCTGTACGAAATA---------------TTC------CTC---GGTGAAGCAGGCAAAGCAGCGAAGCAC------CAA---GCCAGCGATTCAGTG---AAA---TTT---GCT---TAC---AAT---CTTATG---CGTTGGATCGTGACTGTT---------------------------------------------------------------GGTTGG---------GCGATTTATCCTCTCGGTTATGTTTTGGGGTACATG---------------------------------------ATGGGAGCGGTTGATGACGCTTCTCTGAACTTAGTTTACAACCTAGCCGACGTGGTGAATAAAATAGCGTTTGGTCTGTTAATTTGGTACGCGGCGACCTCGGAA---AGTCAGGACGCCAAGGGA--------------------------------------------------------------------------------------------------------- ---------------------------------MSTIIFFEHYLLIIQSNFFVTNFEKRDSFKRVVLAKPTATSETIMENLVKNFIPLLKWNRQHNLHFKIPLVAAATVFPNAANAAANLQPNDFVGISFWLISMALMASTVFFLWETQGVTA-KWKTSLTVSALVTLIAAVHYFYMRDVWV----------AT-------GETPTVYRYIDW--------LLTVPLLMIEFYLILRA---I-GAASA-GI------------FWR-LLVGTLVMLIAGFLGE---V------G--H-----------I----------------------SV------TVG-FVIGMLGWFYILYEI-----F--L-GEAGKAAKH--Q-ASDSV-K-F-A-Y-N-LM-RWIVTV---------------------GW---AIYPLGYVLGYM-------------MGAVDDASLNLVYNLADVVNKIAFGLLIWYAATSE-SQDAKG----------------------------------- [III-Gamma4-Vibrio]_KC871598 [III-Gamma4-Vibrio] Vibrio_campbellii_PEL22A_KC871598 gi|484354810|gb|KC871598| Vibrio campbellii strain PEL22A proteorhodopsin gene, partial cds. Vibrio campbellii strain PEL22A proteorhodopsin gene, partial cds. KC871598 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Glaciecola-like Vibrio-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Glaciecola-like Vibrio-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Gammaproteobacteria/Vibrionales/Vibrionaceae/Vibrio] taxon:680 genomic DNA strain 25-FEB-2014 #na open ocean water of the Abrolhos Bank Atlantic Ocean marine 25.278395 83.016216 Diversity and population structure of the vibrioplankton in the Abrolhos Bank Silva,B.S. and Thompson,F.L. Unpublished #na #na TACATCGACTGGCTACTTACCGTCCCACTGCTGATGATTGAGTTTTACCTTATACTTCGTGCCATTGGTGCAGCCTCTGCTGGTATATTCTGGCGCCTTCTTGTCGGTACTCTGGTTATGCTAATTGCAGGCTTTTTGGGTGAAGTCGGTTATATCAGCGTTACAGTTGGCTTCGTCATCGGCATGCTGGGGTGGTTCTACATCCTGTACGAAATATTCCTCGGTGAAGCAGGCAAAGCAGCGAAGCACCAAGCTAGCGATTCAGTGAAATTTGCTTACAATCTGATGCGTTGGATCGTGACTGTTGGGTGGGCGATTTACCCA YIDWLLTVPLLMIEFYLILRAIGAASAGIFWRLLVGTLVMLIAGFLGEVGYISVTVGFVIGMLGWFYILYEIFLGEAGKAAKHQASDSVKFAYNLMRWIVTVGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACATCGACTGG------------------------CTACTTACCGTCCCACTGCTGATGATTGAGTTTTACCTTATACTTCGTGCC---------ATT---GGTGCAGCCTCTGCT---GGTATA------------------------------------TTCTGGCGC---CTTCTTGTCGGTACTCTGGTTATGCTAATTGCAGGCTTTTTGGGTGAA---------GTC------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------AGCGTT------------------ACAGTTGGC---TTCGTCATCGGCATGCTGGGGTGGTTCTACATCCTGTACGAAATA---------------TTC------CTC---GGTGAAGCAGGCAAAGCAGCGAAGCAC------CAA---GCTAGCGATTCAGTG---AAA---TTT---GCT---TAC---AAT---CTGATG---CGTTGGATCGTGACTGTT---------------------------------------------------------------GGGTGG---------GCGATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YIDW--------LLTVPLLMIEFYLILRA---I-GAASA-GI------------FWR-LLVGTLVMLIAGFLGE---V------G--Y-----------I----------------------SV------TVG-FVIGMLGWFYILYEI-----F--L-GEAGKAAKH--Q-ASDSV-K-F-A-Y-N-LM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Gamma4-Vibrio]_NZ_ABGR01000002 [III-Gamma4-Vibrio] Vibrio_sp_AND4_1103602000593_genome_NZ_ABGR01000002 gi|163800684|gb|NZ_ABGR01000002| Vibrio sp AND4 1103602000593, whole genome shotgun sequence Vibrio sp AND4 1103602000593, whole genome shotgun sequence NZ_ABGR01000002 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Glaciecola-like Vibrio-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Glaciecola-like Vibrio-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Gammaproteobacteria/Vibrionales/Vibrionaceae/Vibrio] taxon:314289 genomic_DNA strain 11-May-2013 #na #na Andaman Sea marine 7.79944 98.2075 Proteorhodopsin phototrophy promotes survival of marine bacteria during starvation GomezConsarnau,L., Akram,N., Lindell,K., Pedersen,A., Neutze,R., Milton,D.L., Gonzalez,J.M. and Pinhassi,J. PLoS Biol. 8 (4), E1000358 (2010) 20436956 #na ATGAAAAACCAAGTTGAAAAGATAACACCGCTTTCGCTGTGGGCTAATACCCCTAGCTTGCTGACAAAATTGCTATTATCAATGGCGATACTACTTTTTCCAACGGCTGTTTATGCTGCGGCAAATTTACAACCGAATGACTTTGTTGGTATTTCCTTTTGGTTGATATCGATGGCTTTAATGGCCTCCACTGTGTTCTTTTTATGGGAAACACAATGCGTCACTGCGAAATGGAAAACATCACTAACAGTGTCGGCTTTGGTTACTTTAATTGCAGCGGTTCACTATTTCTATATGAGGGATGTTTGGGTTGCGACCGGTGAAACACCGACTGTCTACAGATATATCGACTGGTTGCTCACAGTGCCATTACTCATGATTGAGTTCTACCTTATACTACGAGCTATCGGCGCGGCCTCTGCTGGCATATTCTGGCGTCTGTTGATTGGTACATTAGTAATGCTAATTGCAGGCTTTATGGGTGAGGTTGGATACATCAGCGTAACCGTCGGATTTGTAATTGGTATGCTAGGCTGGTTTTATATTCTCTATGAAATTTTTCTTGGCGAAGCGGGTAAAGCAGCGCAACAACAAGCCAGTGACTCCGTGAAATTTGCATATAACCTGATGCGTTGGATTGTGACGGTGGGATGGGCCATCTATCCTATCGGTTACGTTCTGGGCTACATGATGGGCGCGGTTGATGATGCCTCTTTGAACTTAGTTTATAACCTTGCCGATGTGATTAATAAAATCGCGTTTGGATTGCTCATCTGGTATGCGGCAACCTCCGAGAGTCAGGATGCG MKNQVEKITPLSLWANTPSLLTKLLLSMAILLFPTAVYAAANLQPNDFVGISFWLISMALMASTVFFLWETQCVTAKWKTSLTVSALVTLIAAVHYFYMRDVWVATGETPTVYRYIDWLLTVPLLMIEFYLILRAIGAASAGIFWRLLIGTLVMLIAGFMGEVGYISVTVGFVIGMLGWFYILYEIFLGEAGKAAQQQASDSVKFAYNLMRWIVTVGWAIYPIGYVLGYMMGAVDDASLNLVYNLADVINKIAFGLLIWYAATSESQDA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAACCAAGTTGAAAAGATAACACCGCTTTCGCTGTGGGCTAATACCCCTAGCTTGCTGACAAAATTGCTATTATCAATGGCGATACTACTTTTTCCAACGGCTGTTTATGCTGCGGCAAATTTACAACCGAATGACTTTGTTGGTATTTCCTTTTGGTTGATATCGATGGCTTTAATGGCCTCCACTGTGTTCTTTTTATGGGAAACACAATGCGTCACTGCG---AAATGGAAAACATCACTAACAGTGTCGGCTTTGGTTACTTTAATTGCAGCGGTTCACTATTTCTATATGAGGGATGTTTGGGTT------------------------------GCGACC---------------------GGTGAAACACCGACTGTCTACAGATATATCGACTGG------------------------TTGCTCACAGTGCCATTACTCATGATTGAGTTCTACCTTATACTACGAGCT---------ATC---GGCGCGGCCTCTGCT---GGCATA------------------------------------TTCTGGCGT---CTGTTGATTGGTACATTAGTAATGCTAATTGCAGGCTTTATGGGTGAG---------GTT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AGCGTA------------------ACCGTCGGA---TTTGTAATTGGTATGCTAGGCTGGTTTTATATTCTCTATGAAATT---------------TTT------CTT---GGCGAAGCGGGTAAAGCAGCGCAACAA------CAA---GCCAGTGACTCCGTG---AAA---TTT---GCA---TAT---AAC---CTGATG---CGTTGGATTGTGACGGTG---------------------------------------------------------------GGATGG---------GCCATCTATCCTATCGGTTACGTTCTGGGCTACATG---------------------------------------ATGGGCGCGGTTGATGATGCCTCTTTGAACTTAGTTTATAACCTTGCCGATGTGATTAATAAAATCGCGTTTGGATTGCTCATCTGGTATGCGGCAACCTCCGAG---AGTCAGGATGCG--------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------MKNQVEKITPLSLWANTPSLLTKLLLSMAILLFPTAVYAAANLQPNDFVGISFWLISMALMASTVFFLWETQCVTA-KWKTSLTVSALVTLIAAVHYFYMRDVWV----------AT-------GETPTVYRYIDW--------LLTVPLLMIEFYLILRA---I-GAASA-GI------------FWR-LLIGTLVMLIAGFMGE---V------G--Y-----------I----------------------SV------TVG-FVIGMLGWFYILYEI-----F--L-GEAGKAAQQ--Q-ASDSV-K-F-A-Y-N-LM-RWIVTV---------------------GW---AIYPIGYVLGYM-------------MGAVDDASLNLVYNLADVINKIAFGLLIWYAATSE-SQDA------------------------------------- [III-Gamma4-Vibrio]_GU338846 [III-Gamma4-Vibrio] CE_C_4B15_env_samples_GU338846 gi|283574560|gb|GU338846| Uncultured Antarctic sea ice bacterium clone CE C 4B15 putative proteorhodopsin gene, partial cds Uncultured Antarctic sea ice bacterium clone CE C 4B15 putative proteorhodopsin gene, partial cds GU338846 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Glaciecola-like Vibrio-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Glaciecola-like Vibrio-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:219048 genomic_DNA other 27Aug-2010 #na bottom_sea_ice Antarctic Ocean marine -77.633333 166.400000 Proteorhodopsinbearing bacteria in Antarctic sea ice Koh,E.Y., AtamnaIsmaeel,N., Martin,A., Cowie,R.O., Beja,O., Davy,S.K., Maas,E.W. and Ryan,K.G. Appl. Environ. Microbiol. 76 (17), 59185925 (2010) 20601510 #na GCTTGCGCGCAATTCCACCGCTACATAGATTGGTTATTGACGGTTCCATTATTAATGATTGAATTTTATCTCATTTCGCGCGCTATCGGCGTTGCGTCTGGAGGAATTTTCTGGCGCTTGTTAATCGGTACGTTGGTAATGCTTATACCTGGCTATATGGCTGAAGCAGGTTACCTTAACATTACGGTAGGATTTGTAATTGGTATGGCGGGTTGGTTCTATATCCTTTACGAAATTTTCCTTGGAGAAGCGGGTAAAGCAGCTGAAGCAAGTGCAAGCGCTGCTGTAAAATATGCCTACAATGCCATGCGTTGGATTGTGACTGTGGGATGGGCTATATACCCAAGCTTGCGCGCAAGC ACAQFHRYIDWLLTVPLLMIEFYLISRAIGVASGGIFWRLLIGTLVMLIPGYMAEAGYLNITVGFVIGMAGWFYILYEIFLGEAGKAAEASASAAVKYAYNAMRWIVTVGWAIYPSLRAS ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTTGCGCGCAATTCCACCGCTACATAGATTGG------------------------TTATTGACGGTTCCATTATTAATGATTGAATTTTATCTCATTTCGCGCGCT---------ATC---GGCGTTGCGTCTGGA---GGAATT------------------------------------TTCTGGCGC---TTGTTAATCGGTACGTTGGTAATGCTTATACCTGGCTATATGGCTGAA---------GCA------------------GGT------TAC---------------------------------CTT------------------------------------------------------------------AACATT------------------ACGGTAGGA---TTTGTAATTGGTATGGCGGGTTGGTTCTATATCCTTTACGAAATT---------------TTC------CTT---GGAGAAGCGGGTAAAGCAGCTGAAGCA------AGT---GCAAGCGCTGCTGTA---AAA---TAT---GCC---TAC---AAT---GCCATG---CGTTGGATTGTGACTGTG---------------------------------------------------------------GGATGG---------GCTATATACCCAAGCTTGCGCGCAAGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAQFHRYIDW--------LLTVPLLMIEFYLISRA---I-GVASG-GI------------FWR-LLIGTLVMLIPGYMAE---A------G--Y-----------L----------------------NI------TVG-FVIGMAGWFYILYEI-----F--L-GEAGKAAEA--S-ASAAV-K-Y-A-Y-N-AM-RWIVTV---------------------GW---AIYPSLRAS--------------------------------------------------------------------------------------------- [III-Gamma4-Vibrio]_GU338848 [III-Gamma4-Vibrio] CE_C_4B27_env_samples_GU338848 gi|283574564|gb|GU338848| Uncultured Antarctic sea ice bacterium clone CE C 4B27 putative proteorhodopsin gene, partial cds Uncultured Antarctic sea ice bacterium clone CE C 4B27 putative proteorhodopsin gene, partial cds GU338848 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Glaciecola-like Vibrio-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Glaciecola-like Vibrio-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:219048 genomic_DNA other 27Aug-2010 #na bottom_sea_ice Antarctic Ocean marine -77.633333 166.400000 Proteorhodopsinbearing bacteria in Antarctic sea ice Koh,E.Y., AtamnaIsmaeel,N., Martin,A., Cowie,R.O., Beja,O., Davy,S.K., Maas,E.W. and Ryan,K.G. Appl. Environ. Microbiol. 76 (17), 59185925 (2010) 20601510 #na GCTTGCGCGCAATTCCACCGCTATATCGACTGGTTATTGACGGTTCCATTATTAATGATTGAATTTTATCTCATTTTGCGCGCTATCGGCGTTGCGTCTGGAGGAATTTTCTGGCGCTTGTTAATCGGTACGTTGGTAATGCTTATACCTGGCTATATGGCTGAAGCAGGTTACCTTAACATTACGGTAGGATTTGTAATTGGTATGGCGGGTTGGTTCTATATCCTTTACGAAATTTTCCTTGGAGAAGCGGGTAAAGCAGCTGAAGCAAGTGCAAGCGCTGCTGTAAAATATGCCTACAATGCCATGCGTTGGATTGTGACTGTAGGGTGGGCGATATACCCAAGCTTGCGCGCAAGC ACAQFHRYIDWLLTVPLLMIEFYLILRAIGVASGGIFWRLLIGTLVMLIPGYMAEAGYLNITVGFVIGMAGWFYILYEIFLGEAGKAAEASASAAVKYAYNAMRWIVTVGWAIYPSLRAS ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTTGCGCGCAATTCCACCGCTATATCGACTGG------------------------TTATTGACGGTTCCATTATTAATGATTGAATTTTATCTCATTTTGCGCGCT---------ATC---GGCGTTGCGTCTGGA---GGAATT------------------------------------TTCTGGCGC---TTGTTAATCGGTACGTTGGTAATGCTTATACCTGGCTATATGGCTGAA---------GCA------------------GGT------TAC---------------------------------CTT------------------------------------------------------------------AACATT------------------ACGGTAGGA---TTTGTAATTGGTATGGCGGGTTGGTTCTATATCCTTTACGAAATT---------------TTC------CTT---GGAGAAGCGGGTAAAGCAGCTGAAGCA------AGT---GCAAGCGCTGCTGTA---AAA---TAT---GCC---TAC---AAT---GCCATG---CGTTGGATTGTGACTGTA---------------------------------------------------------------GGGTGG---------GCGATATACCCAAGCTTGCGCGCAAGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAQFHRYIDW--------LLTVPLLMIEFYLILRA---I-GVASG-GI------------FWR-LLIGTLVMLIPGYMAE---A------G--Y-----------L----------------------NI------TVG-FVIGMAGWFYILYEI-----F--L-GEAGKAAEA--S-ASAAV-K-Y-A-Y-N-AM-RWIVTV---------------------GW---AIYPSLRAS--------------------------------------------------------------------------------------------- [III-Gamma4-Vibrio]_JX863285 [III-Gamma4-Vibrio] MALINA_OTU20_279_L_env_samples_JX863285 gi|425477520|gb|JX863285| Uncultured bacterium clone MALINA OTU20 279 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU20 279 L putative proteorhodopsin mRNA, partial cds JX863285 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Glaciecola-like Vibrio-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Glaciecola-like Vibrio-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 11Aug2009 3m_depth Arctic Ocean marine 70.68 -139.62 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTACTGACAGTTCCATTATTAATGATTGAATTCTACCTCATTTTACGTGCTATCGGCGTTGCATCCTCAGGGATCTTTTGGCGCTTATTAATCGGTACACTAGTAATGCTTATACCCGGTTATATGGCTGAATCAGGTTACTTGAACATCACAGTAGGATTTGTTATTGGTATGGCCGGTTGGTTTTATATTCTTTATGAAATCTTTCTTGGTGAAGCAGGTAAAGCAGCCGAAGCAACTGCAAGTGATGCAGTAAAGTTTGCATACAAAGCGATGCGTTGGATTGTAACTGTA WLLTVPLLMIEFYLILRAIGVASSGIFWRLLIGTLVMLIPGYMAESGYLNITVGFVIGMAGWFYILYEIFLGEAGKAAEATASDAVKFAYKAMRWIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTACTGACAGTTCCATTATTAATGATTGAATTCTACCTCATTTTACGTGCT---------ATC---GGCGTTGCATCCTCA---GGGATC------------------------------------TTTTGGCGC---TTATTAATCGGTACACTAGTAATGCTTATACCCGGTTATATGGCTGAA---------TCA------------------GGT------TAC---------------------------------TTG------------------------------------------------------------------AACATC------------------ACAGTAGGA---TTTGTTATTGGTATGGCCGGTTGGTTTTATATTCTTTATGAAATC---------------TTT------CTT---GGTGAAGCAGGTAAAGCAGCCGAAGCA------ACT---GCAAGTGATGCAGTA---AAG---TTT---GCA---TAC---AAA---GCGATG---CGTTGGATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLMIEFYLILRA---I-GVASS-GI------------FWR-LLIGTLVMLIPGYMAE---S------G--Y-----------L----------------------NI------TVG-FVIGMAGWFYILYEI-----F--L-GEAGKAAEA--T-ASDAV-K-F-A-Y-K-AM-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-Vibrio]_JX863346 [III-Gamma4-Vibrio] RCC2389_Glaciecola_JX863346 gi|425477642|gb|JX863346| Glaciecola sp RCC2389 putative proteorhodopsin gene, partial cds Glaciecola sp RCC2389 putative proteorhodopsin gene, partial cds JX863346 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Glaciecola-like Vibrio-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Glaciecola-like Vibrio-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Gammaproteobacteria/Alteromonadales/Alteromonadaceae/Glaciecola] taxon:1262151 genomic_DNA strain 01-DEC-2012 06Aug2009 3m_depth Arctic Ocean marine 71.7 -126.48 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGTTGACTGTACCATTGCTGATGATTGAATTTTATCTGATATTACGTGCTATTGGCGTTGCATCTCCTGGTATATTCTGGCGTCTGTTGATCGGTACATTGGTTATGTTGATTCCAGGGTATCTGGCAGAAGCGGGTTACATGAATATCACTATAGGTTTCGTTATCGGTATGCTAGGTTGGTTCTACATTCTTTATGAAATCTTTTTTGGTGCAGCTGGTAAAGCCGCAGAAACCGCAACTAGTCCTGCTGTAAAGTATACATACAACGCTATGCGTTGGATCGTAACTGTT WLLTVPLLMIEFYLILRAIGVASPGIFWRLLIGTLVMLIPGYLAEAGYMNITIGFVIGMLGWFYILYEIFFGAAGKAAETATSPAVKYTYNAMRWIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGTTGACTGTACCATTGCTGATGATTGAATTTTATCTGATATTACGTGCT---------ATT---GGCGTTGCATCTCCT---GGTATA------------------------------------TTCTGGCGT---CTGTTGATCGGTACATTGGTTATGTTGATTCCAGGGTATCTGGCAGAA---------GCG------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATATC------------------ACTATAGGT---TTCGTTATCGGTATGCTAGGTTGGTTCTACATTCTTTATGAAATC---------------TTT------TTT---GGTGCAGCTGGTAAAGCCGCAGAAACC------GCA---ACTAGTCCTGCTGTA---AAG---TAT---ACA---TAC---AAC---GCTATG---CGTTGGATCGTAACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLMIEFYLILRA---I-GVASP-GI------------FWR-LLIGTLVMLIPGYLAE---A------G--Y-----------M----------------------NI------TIG-FVIGMLGWFYILYEI-----F--F-GAAGKAAET--A-TSPAV-K-Y-T-Y-N-AM-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-Vibrio]_JX863349 [III-Gamma4-Vibrio] RCC2412_Glaciecola_JX863349 gi|425477648|gb|JX863349| Glaciecola sp RCC2412 putative proteorhodopsin gene, partial cds Glaciecola sp RCC2412 putative proteorhodopsin gene, partial cds JX863349 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Glaciecola-like Vibrio-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Glaciecola-like Vibrio-like subcluster proteorhodopsin proton pump na ; na light-energy conversion (ion transport) unknown [Bacteria/Proteobacteria/Gammaproteobacteria/Alteromonadales/Alteromonadaceae/Glaciecola] taxon:1262154 genomic_DNA strain 01-DEC-2012 31-juil-09 3m_depth Arctic Ocean marine 70.18 -133.56 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Lebaron,P. and Jeanthon,C. Unpublished #na #na TTTTATCTGATATTACGTGCTATTGGCGTTGCATCTCCTGGTATATTCTGGCGTCTGTTGATCGGTACATTGGTTATGTTGATTCCAGGGTATCTGGCAGAAGCGGGTTACATGAATATCACTATAGGTTTCGTTATCGGTATGCTAGGTTGGTTCTACATTCTTTATGAAATCTTTTTTGGTGCAGCTGGTAAAGCCGCAGAAACCGCAACTAGTCCTGCTGTAAAGTATACATACAACGCTATGCGTTGGATCGTAACTGTT FYLILRAIGVASPGIFWRLLIGTLVMLIPGYLAEAGYMNITIGFVIGMLGWFYILYEIFFGAAGKAAETATSPAVKYTYNAMRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTATCTGATATTACGTGCT---------ATT---GGCGTTGCATCTCCT---GGTATA------------------------------------TTCTGGCGT---CTGTTGATCGGTACATTGGTTATGTTGATTCCAGGGTATCTGGCAGAA---------GCG------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATATC------------------ACTATAGGT---TTCGTTATCGGTATGCTAGGTTGGTTCTACATTCTTTATGAAATC---------------TTT------TTT---GGTGCAGCTGGTAAAGCCGCAGAAACC------GCA---ACTAGTCCTGCTGTA---AAG---TAT---ACA---TAC---AAC---GCTATG---CGTTGGATCGTAACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FYLILRA---I-GVASP-GI------------FWR-LLIGTLVMLIPGYLAE---A------G--Y-----------M----------------------NI------TIG-FVIGMLGWFYILYEI-----F--F-GAAGKAAET--A-TSPAV-K-Y-T-Y-N-AM-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-Vibrio]_JX863348 [III-Gamma4-Vibrio] RCC2390_Glaciecola_JX863348 gi|425477646|gb|JX863348| Glaciecola sp RCC2390 putative proteorhodopsin gene, partial cds Glaciecola sp RCC2390 putative proteorhodopsin gene, partial cds JX863348 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Glaciecola-like Vibrio-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Glaciecola-like Vibrio-like subcluster proteorhodopsin proton pump na ; na light-energy conversion (ion transport) unknown [Bacteria/Proteobacteria/Gammaproteobacteria/Alteromonadales/Alteromonadaceae/Glaciecola] taxon:1262152 genomic_DNA strain 01-DEC-2012 08Aug2009 3m_depth Arctic Ocean marine 70.4 -133.61 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Lebaron,P. and Jeanthon,C. Unpublished #na #na TTTTATCTGATATTACGTGCTATTGGCGTTGCATCTCCTGGTATATTCTGGCGTCTGTTGATCGGTACATTGGTTATGTTGATTCCAGGGTATCTGGCAGAAGCGGGTTACATGAATATCACTATAGGTTTCGTTATCGGTATGCTAGGTTGGTTCTACATTCTTTATGAAATCTTTTTTGGTGCAGCTGGTAAAGCCGCAGAAACCGCAACTAGTCCTGCTGTAAAGTATACATACAACGCTATGCGCTGGATCGTAACTGTT FYLILRAIGVASPGIFWRLLIGTLVMLIPGYLAEAGYMNITIGFVIGMLGWFYILYEIFFGAAGKAAETATSPAVKYTYNAMRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTATCTGATATTACGTGCT---------ATT---GGCGTTGCATCTCCT---GGTATA------------------------------------TTCTGGCGT---CTGTTGATCGGTACATTGGTTATGTTGATTCCAGGGTATCTGGCAGAA---------GCG------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATATC------------------ACTATAGGT---TTCGTTATCGGTATGCTAGGTTGGTTCTACATTCTTTATGAAATC---------------TTT------TTT---GGTGCAGCTGGTAAAGCCGCAGAAACC------GCA---ACTAGTCCTGCTGTA---AAG---TAT---ACA---TAC---AAC---GCTATG---CGCTGGATCGTAACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FYLILRA---I-GVASP-GI------------FWR-LLIGTLVMLIPGYLAE---A------G--Y-----------M----------------------NI------TIG-FVIGMLGWFYILYEI-----F--F-GAAGKAAET--A-TSPAV-K-Y-T-Y-N-AM-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-Vibrio]_JX863347 [III-Gamma4-Vibrio] RCC2398_Glaciecola_JX863347 gi|425477644|gb|JX863347| Glaciecola sp RCC2398 putative proteorhodopsin gene, partial cds Glaciecola sp RCC2398 putative proteorhodopsin gene, partial cds JX863347 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Glaciecola-like Vibrio-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Glaciecola-like Vibrio-like subcluster proteorhodopsin proton pump na ; na light-energy conversion (ion transport) unknown [Bacteria/Proteobacteria/Gammaproteobacteria/Alteromonadales/Alteromonadaceae/Glaciecola] taxon:1262153 genomic_DNA strain 01-DEC-2012 23Aug2009 3m_depth Arctic Ocean marine 71.76 -130.83 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Lebaron,P. and Jeanthon,C. Unpublished #na #na TTTTATCTGATATTACGTGCTATTGGCGTTGCATCTCCTGGTATATTCTGGCGTCTGTTGATCGGTACATTGGTTATGTTGATTCCAGGGTATCTGGCAGAATCGGGTTACATGAATGTCACTATAGGTTTCGTTATCGGTATGCTAGGTTGGTTCTACATTCTTTATGAAATCTTTTTTGGTCCAGCTGGTAAAGCCGCAGAAACCGCAACTAGTCCTGCTGTAAAGTACACATACAACGCTATGCGTTGGATCGTAACTGTT FYLILRAIGVASPGIFWRLLIGTLVMLIPGYLAESGYMNVTIGFVIGMLGWFYILYEIFFGPAGKAAETATSPAVKYTYNAMRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTATCTGATATTACGTGCT---------ATT---GGCGTTGCATCTCCT---GGTATA------------------------------------TTCTGGCGT---CTGTTGATCGGTACATTGGTTATGTTGATTCCAGGGTATCTGGCAGAA---------TCG------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTATAGGT---TTCGTTATCGGTATGCTAGGTTGGTTCTACATTCTTTATGAAATC---------------TTT------TTT---GGTCCAGCTGGTAAAGCCGCAGAAACC------GCA---ACTAGTCCTGCTGTA---AAG---TAC---ACA---TAC---AAC---GCTATG---CGTTGGATCGTAACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FYLILRA---I-GVASP-GI------------FWR-LLIGTLVMLIPGYLAE---S------G--Y-----------M----------------------NV------TIG-FVIGMLGWFYILYEI-----F--F-GPAGKAAET--A-TSPAV-K-Y-T-Y-N-AM-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-Vibrio]_CP003060 [III-Gamma4-Vibrio] Glaciecola_nitratireducens_FR1064_genome_NC_16041 gi|347944810|gb|CP003060| Glaciecola nitratireducens FR1064, complete genome Glaciecola nitratireducens FR1064, complete genome CP003060 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Glaciecola-like Vibrio-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Glaciecola-like Vibrio-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Gammaproteobacteria/Alteromonadales/Alteromonadaceae/Glaciecola] taxon:1085623 genomic_DNA strain 31-janv-14 #na #na China Sea marine 33.51 126.52 #na #na #na #na #na ATGACTACAAAAAACGCTTATAACAAAACAAAAAGCTTCTCGCTGAGCAACGTCAGCGTCAATGTAAAAATGATGGTTACCGCATTATTTTTATTAATGTTACCCACCTTTGCAAGTGCCGCAGCTAATTTAGAATCCGACGATTTTGTTGGCATTTCGTTTTGGCTAATCTCTATGGCATTAATGGCGTCAACTGTATTTTTCCTTTGGGAAACGCAGGGCGTAACCGCCAAATGGAAAACCTCGCTTGTAGTATCAGCGCTAGTAACTTTCATAGCAGCCGTTCACTATTTCTATATGCGCGATGTATGGGTTGCTACGCAATCGACACCTACCGTGTATAGGTATATAGATTGGTTGTTAACAGTGCCACTTCTTATGATTGAATTCTATTTGATACTGCGTGCAATCGGCGTAGCATCTGCTGGAATATTCTGGCGTCTACTAATTGGTACTTTAGTGATGCTTATACCAGGATACATGTCAGAAGCTGGCTATTTAAATATTACAGTAGGCTTTGTAATCGGTATGTTGGGTTGGTTTTATATTCTATATGAAATCTTCTTCGGCGAAGCCGGAAAAGCTGCTGAAGCAAACGCGAGTCCTGCTGTAACATATGCATACAAAGCAATGCGTTGGATCGTGACGGTAGGTTGGGCGATATACCCAATTGGTTACGTGCTTGGTTATATGACGGGTACAGCTGACCAAGAAACACTTAACATAGTGTACAACCTTGCTGATTTGGTTAACAAGATCGCGTTTGGTTTGTTGATATGGTACGCGGCTACTAGTGAAAGCCAAAGCGCAGCAGAGAAACACGCT MTTKNAYNKTKSFSLSNVSVNVKMMVTALFLLMLPTFASAAANLESDDFVGISFWLISMALMASTVFFLWETQGVTAKWKTSLVVSALVTFIAAVHYFYMRDVWVATQSTPTVYRYIDWLLTVPLLMIEFYLILRAIGVASAGIFWRLLIGTLVMLIPGYMSEAGYLNITVGFVIGMLGWFYILYEIFFGEAGKAAEANASPAVTYAYKAMRWIVTVGWAIYPIGYVLGYMTGTADQETLNIVYNLADLVNKIAFGLLIWYAATSESQSAAEKHA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGACTACAAAAAACGCTTATAACAAAACAAAAAGCTTCTCGCTGAGCAACGTCAGCGTCAATGTAAAAATGATGGTTACCGCATTATTTTTATTAATGTTACCCACCTTTGCAAGTGCCGCAGCTAATTTAGAATCCGACGATTTTGTTGGCATTTCGTTTTGGCTAATCTCTATGGCATTAATGGCGTCAACTGTATTTTTCCTTTGGGAAACGCAGGGCGTAACCGCC---AAATGGAAAACCTCGCTTGTAGTATCAGCGCTAGTAACTTTCATAGCAGCCGTTCACTATTTCTATATGCGCGATGTATGGGTT------------------------------GCTACG---------------------CAATCGACACCTACCGTGTATAGGTATATAGATTGG------------------------TTGTTAACAGTGCCACTTCTTATGATTGAATTCTATTTGATACTGCGTGCA---------ATC---GGCGTAGCATCTGCT---GGAATA------------------------------------TTCTGGCGT---CTACTAATTGGTACTTTAGTGATGCTTATACCAGGATACATGTCAGAA---------GCT------------------GGC------TAT---------------------------------TTA------------------------------------------------------------------AATATT------------------ACAGTAGGC---TTTGTAATCGGTATGTTGGGTTGGTTTTATATTCTATATGAAATC---------------TTC------TTC---GGCGAAGCCGGAAAAGCTGCTGAAGCA------AAC---GCGAGTCCTGCTGTA---ACA---TAT---GCA---TAC---AAA---GCAATG---CGTTGGATCGTGACGGTA---------------------------------------------------------------GGTTGG---------GCGATATACCCAATTGGTTACGTGCTTGGTTATATG---------------------------------------ACGGGTACAGCTGACCAAGAAACACTTAACATAGTGTACAACCTTGCTGATTTGGTTAACAAGATCGCGTTTGGTTTGTTGATATGGTACGCGGCTACTAGTGAA---AGCCAAAGCGCAGCAGAGAAACACGCT------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------MTTKNAYNKTKSFSLSNVSVNVKMMVTALFLLMLPTFASAAANLESDDFVGISFWLISMALMASTVFFLWETQGVTA-KWKTSLVVSALVTFIAAVHYFYMRDVWV----------AT-------QSTPTVYRYIDW--------LLTVPLLMIEFYLILRA---I-GVASA-GI------------FWR-LLIGTLVMLIPGYMSE---A------G--Y-----------L----------------------NI------TVG-FVIGMLGWFYILYEI-----F--F-GEAGKAAEA--N-ASPAV-T-Y-A-Y-K-AM-RWIVTV---------------------GW---AIYPIGYVLGYM-------------TGTADQETLNIVYNLADLVNKIAFGLLIWYAATSE-SQSAAEKHA-------------------------------- [III-Gamma4-Vibrio]_BAET01000022 [III-Gamma4-Vibrio] Glaciecola_punicea_DSM_14233_ACAM_611_CTG022_genome_BAET01000022 gi|379328975|gb|BAET01000022| Glaciecola punicea DSM 14233 ACAM 611 DNA, contig: CTG022, whole genome shotgun sequence Glaciecola punicea DSM 14233 ACAM 611 DNA, contig: CTG022, whole genome shotgun sequence BAET01000022 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Glaciecola-like Vibrio-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Glaciecola-like Vibrio-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Gammaproteobacteria/Alteromonadales/Alteromonadaceae/Glaciecola] taxon:1121923 genomic_DNA strain 07-juin-12 #na #na Antarctic Ocean marine -67.742759 77.138668 Genome Sequence of ProteorhodopsinContaining Sea Ice Bacterium Glaciecola punicea ACAM 611T Qin,Q.L., Xie,B.B., Shu,Y.L., Rong,J.C., Zhao,D.L., Zhang,X.Y., Chen,X.L., Zhou,B.C. and Zhang,Y.Z. J. Bacteriol. 194 (12), 3267 (2012) 22628500 contig: CTG022 ATGATGATAAAAAACGCTTACAAAAAGACAAAAGGCTTTTCGTTAAGCCAAGTCAGCGTTAAATTAAAATTAATCGTAACAGGATTATTTTTATTAACGTTTGCTGGTTTTGCAAATGCCGCAGCAGGCTTAGCTCAAGATGATTTCGTAGGTATTTCATTTTGGATAATTTCAATGGCTTTAATGGCTTCTACCGTGTTTTTCCTTTGGGAAACACAAGGCGTAACCGCAAAATGGAAAACGTCATTGGTCGTTTCAGCTTTAGTAACATTCATTGCGGCAGTGCATTATTTCTACATGCGCGACGTGTGGGTGGCAACAGGTGAGTCACCAACTGTATTTAGATATATAGACTGGTTATTAACCGTTCCGTTACTAATGATTGAATTTTACTTAATTCTACGCGCTATCGGCGTAGCATCTATTGGTATTTTCTGGCGCTTATTGATAGGTACTTTGGTCATGTTAATTCCAGGGTATTTAGGCGAATCTGGCTACATCAATATTTGGGTAGGTTTCGTAATTGGTATGCTAGGATGGTTCTACATCCTGTATGAAATATTCTACGGCGAAGCAGGCAAAGCAGCTGAAACACAAGCCACTCCGGCAGTTAAGTACGCATACAAAGCTATGTGCTGGATTGTAACCGTTGGTTGGGCTATTTACCCAATTGGTTATGTTGCAGGATACACGGGCGTAGGCAGTTCTGAAGCGCTTAACATTATTTATAACTTTGCAGACTTAGTAAACAAAGTAGCGTTCGGCCTATTAATTTGGTACGCGGCGACTACTGAAAGTCAAGCAGAACCAGTAGCAAGTAAGGCA MMIKNAYKKTKGFSLSQVSVKLKLIVTGLFLLTFAGFANAAAGLAQDDFVGISFWIISMALMASTVFFLWETQGVTAKWKTSLVVSALVTFIAAVHYFYMRDVWVATGESPTVFRYIDWLLTVPLLMIEFYLILRAIGVASIGIFWRLLIGTLVMLIPGYLGESGYINIWVGFVIGMLGWFYILYEIFYGEAGKAAETQATPAVKYAYKAMCWIVTVGWAIYPIGYVAGYTGVGSSEALNIIYNFADLVNKVAFGLLIWYAATTESQAEPVASKA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGATGATAAAAAACGCTTACAAAAAGACAAAAGGCTTTTCGTTAAGCCAAGTCAGCGTTAAATTAAAATTAATCGTAACAGGATTATTTTTATTAACGTTTGCTGGTTTTGCAAATGCCGCAGCAGGCTTAGCTCAAGATGATTTCGTAGGTATTTCATTTTGGATAATTTCAATGGCTTTAATGGCTTCTACCGTGTTTTTCCTTTGGGAAACACAAGGCGTAACCGCA---AAATGGAAAACGTCATTGGTCGTTTCAGCTTTAGTAACATTCATTGCGGCAGTGCATTATTTCTACATGCGCGACGTGTGGGTG------------------------------GCAACA---------------------GGTGAGTCACCAACTGTATTTAGATATATAGACTGG------------------------TTATTAACCGTTCCGTTACTAATGATTGAATTTTACTTAATTCTACGCGCT---------ATC---GGCGTAGCATCTATT---GGTATT------------------------------------TTCTGGCGC---TTATTGATAGGTACTTTGGTCATGTTAATTCCAGGGTATTTAGGCGAA---------TCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATATT------------------TGGGTAGGT---TTCGTAATTGGTATGCTAGGATGGTTCTACATCCTGTATGAAATA---------------TTC------TAC---GGCGAAGCAGGCAAAGCAGCTGAAACA------CAA---GCCACTCCGGCAGTT---AAG---TAC---GCA---TAC---AAA---GCTATG---TGCTGGATTGTAACCGTT---------------------------------------------------------------GGTTGG---------GCTATTTACCCAATTGGTTATGTTGCAGGATAC------------------------------------------ACGGGCGTAGGCAGTTCTGAAGCGCTTAACATTATTTATAACTTTGCAGACTTAGTAAACAAAGTAGCGTTCGGCCTATTAATTTGGTACGCGGCGACTACTGAA---AGTCAAGCAGAACCAGTAGCAAGTAAG---------------------GCA------------------------------------------------------------------------ ----------------------------------------------------------------------------MMIKNAYKKTKGFSLSQVSVKLKLIVTGLFLLTFAGFANAAAGLAQDDFVGISFWIISMALMASTVFFLWETQGVTA-KWKTSLVVSALVTFIAAVHYFYMRDVWV----------AT-------GESPTVFRYIDW--------LLTVPLLMIEFYLILRA---I-GVASI-GI------------FWR-LLIGTLVMLIPGYLGE---S------G--Y-----------I----------------------NI------WVG-FVIGMLGWFYILYEI-----F--Y-GEAGKAAET--Q-ATPAV-K-Y-A-Y-K-AM-CWIVTV---------------------GW---AIYPIGYVAGY--------------TGVGSSEALNIIYNFADLVNKVAFGLLIWYAATTE-SQAEPVASK-------A------------------------ [III-Alpha1-SAR116/Himb100]_KJ926122 [III-Alpha1-SAR116/Himb100] BOUM_OTU035_env_samples gb|KJ926122| Uncultured bacterium clone BOUM OTU035 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU035 putative proteorhodopsin gene, partial cds KJ926122 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/SAR116 Himb100-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 SAR116 Himb100-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 31.0165 -10.0357 #na #na #na #na #na GTTGATTGGTTGATCACAGTTCCATTGCTGATGATCGAGTTTTATCTGATTTTGCGTGCGATTACCAACGTTTCAGGCGGCATATTTTGGCGCTTGACCATCGGTACATTGGTAATGCTAATCGGTGGTTACTTGGGCGAAGCTGGTTACATGAACGTAACAGTAGCGTTCGTCATTGGCATGGTAGGTTGGGCCTACATTCTGTATGAAATCTTTGCTGGTGAAGCCGGTAAAGTTGCTGCAGAAAAAGCCTCACCTGCTGTAGCATCAGCCTATTCAACAATGCGTTGGATTGTAACAATTGGGTGGGCGATCTAT VDWLITVPLLMIEFYLILRAITNVSGGIFWRLTIGTLVMLIGGYLGEAGYMNVTVAFVIGMVGWAYILYEIFAGEAGKVAAEKASPAVASAYSTMRWIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGATTGG------------------------TTGATCACAGTTCCATTGCTGATGATCGAGTTTTATCTGATTTTGCGTGCG---------ATT---ACCAACGTTTCAGGC---GGCATA------------------------------------TTTTGGCGC---TTGACCATCGGTACATTGGTAATGCTAATCGGTGGTTACTTGGGCGAA---------GCT------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACGTA------------------ACAGTAGCG---TTCGTCATTGGCATGGTAGGTTGGGCCTACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCCGGTAAAGTTGCTGCAGAA------AAA---GCCTCACCTGCTGTA---GCA---TCA---GCC---TAT---TCA---ACAATG---CGTTGGATTGTAACAATT---------------------------------------------------------------GGGTGG---------GCGATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPLLMIEFYLILRA---I-TNVSG-GI------------FWR-LTIGTLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TVA-FVIGMVGWAYILYEI-----F--A-GEAGKVAAE--K-ASPAV-A-S-A-Y-S-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Alpha1-SAR116/Himb100]_DQ203603 [III-Alpha1-SAR116/Himb100] medHO120C11_env_samples_DQ203603 gi|77547654|gb|DQ203603| Uncultured bacterium clone medHO120C11 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120C11 predicted proteorhodopsin gene, partial cds DQ203603 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/SAR116 Himb100-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 SAR116 Himb100-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGACTGGCTGATTACTGTGCCACTGCTGATGATCGAGTTTTATCTGGTACTGCGGGCGATTACAAATGTATCAGGCGGCGTCTTCTGGCGTCTGACCATCGGTACCCTGGTCATGCTGATCGGTGGTTACCTGGGTGAAGCCGGTTACATGAACGTAACTCTGGGCTTTGTCATTGGTATGGTCGGTTGGGCCTACATTCTGTATGAAATCTTTGCTGGTGAAGCTGGCAAGGTGGCTGCAGAACATGCAAAACCATCAGTACAGTCTGCCTATTCAACCATGCGCTGGATTGTAACCATCGGTTGGGCAATCTATCCA SYIDWLITVPLLMIEFYLVLRAITNVSGGVFWRLTIGTLVMLIGGYLGEAGYMNVTLGFVIGMVGWAYILYEIFAGEAGKVAAEHAKPSVQSAYSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGACTGG------------------------CTGATTACTGTGCCACTGCTGATGATCGAGTTTTATCTGGTACTGCGGGCG---------ATT---ACAAATGTATCAGGC---GGCGTC------------------------------------TTCTGGCGT---CTGACCATCGGTACCCTGGTCATGCTGATCGGTGGTTACCTGGGTGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACGTA------------------ACTCTGGGC---TTTGTCATTGGTATGGTCGGTTGGGCCTACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTGGCTGCAGAA------CAT---GCAAAACCATCAGTA---CAG---TCT---GCC---TAT---TCA---ACCATG---CGCTGGATTGTAACCATC---------------------------------------------------------------GGTTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMIEFYLVLRA---I-TNVSG-GV------------FWR-LTIGTLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TLG-FVIGMVGWAYILYEI-----F--A-GEAGKVAAE--H-AKPSV-Q-S-A-Y-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha1-SAR116/Himb100]_DQ203629 [III-Alpha1-SAR116/Himb100] medHO120E7_env_samples_DQ203629 gi|77547706|gb|DQ203629| Uncultured bacterium clone medHO120E7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120E7 predicted proteorhodopsin gene, partial cds DQ203629 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/SAR116 Himb100-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 SAR116 Himb100-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGACTGGCTGATTACTGTGCCACTGCTGATGATCGAGTTTTATCTGGTACTGCGGGCGATTACAAATGTATCAGGCGGCGTCTTCTGGCGTCTGACCATCGGTACCCTGGTCATGCTGATCGGTGGTTACCTGGGTGAAGCCGGTTACATGAACGTAACTCTGGGCTTTGTCATTGGTATGGTCGGTTGGGCCTACATTCTGTATGAAATCTTTGCTGGTGAAGCTGGCAAGGTGGCTGCAGAACATGCAAAACCATCAGTACAGTCTGCCTATTCAACCATGCGCTGGATTGTAACCATCGGTTGGGCAATCTATCCA SYIDWLITVPLLMIEFYLVLRAITNVSGGVFWRLTIGTLVMLIGGYLGEAGYMNVTLGFVIGMVGWAYILYEIFAGEAGKVAAEHAKPSVQSAYSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGACTGG------------------------CTGATTACTGTGCCACTGCTGATGATCGAGTTTTATCTGGTACTGCGGGCG---------ATT---ACAAATGTATCAGGC---GGCGTC------------------------------------TTCTGGCGT---CTGACCATCGGTACCCTGGTCATGCTGATCGGTGGTTACCTGGGTGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACGTA------------------ACTCTGGGC---TTTGTCATTGGTATGGTCGGTTGGGCCTACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTGGCTGCAGAA------CAT---GCAAAACCATCAGTA---CAG---TCT---GCC---TAT---TCA---ACCATG---CGCTGGATTGTAACCATC---------------------------------------------------------------GGTTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMIEFYLVLRA---I-TNVSG-GV------------FWR-LTIGTLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TLG-FVIGMVGWAYILYEI-----F--A-GEAGKVAAE--H-AKPSV-Q-S-A-Y-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha1-SAR116/Himb100]_DQ203598 [III-Alpha1-SAR116/Himb100] medHO120B4_env_samples_DQ203598 gi|77547644|gb|DQ203598| Uncultured bacterium clone medHO120B4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120B4 predicted proteorhodopsin gene, partial cds DQ203598 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/SAR116 Himb100-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 SAR116 Himb100-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTGATTACTGTGCCACTGCTGATGATCGAGTTTTATCTGGTACTGCGGGCGATTACAAATGTATCAGGCGGCGTCTTCTGGCGTCTGACCATCGGTACCCTGGTCATGCTGATCGGTGGTTACCTGGGTGAAGCCGGTTACATGAACGTAACTTTGGGCTTTGTCATTGGTATGGTCGGTTGGGCCTACATTCTGTATGAAATCTTTGCTGGTGAAGCTGGCAAGGTGGCTGCAGAACATGCAAAGCCATCAGTACAGTCTGCCTATTCAACCATGCGCTGGATTGTAACCATCGGTTGGGCGATATATCCA RYIDWLITVPLLMIEFYLVLRAITNVSGGVFWRLTIGTLVMLIGGYLGEAGYMNVTLGFVIGMVGWAYILYEIFAGEAGKVAAEHAKPSVQSAYSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTGATTACTGTGCCACTGCTGATGATCGAGTTTTATCTGGTACTGCGGGCG---------ATT---ACAAATGTATCAGGC---GGCGTC------------------------------------TTCTGGCGT---CTGACCATCGGTACCCTGGTCATGCTGATCGGTGGTTACCTGGGTGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACGTA------------------ACTTTGGGC---TTTGTCATTGGTATGGTCGGTTGGGCCTACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTGGCTGCAGAA------CAT---GCAAAGCCATCAGTA---CAG---TCT---GCC---TAT---TCA---ACCATG---CGCTGGATTGTAACCATC---------------------------------------------------------------GGTTGG---------GCGATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMIEFYLVLRA---I-TNVSG-GV------------FWR-LTIGTLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TLG-FVIGMVGWAYILYEI-----F--A-GEAGKVAAE--H-AKPSV-Q-S-A-Y-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha1-SAR116/Himb100]_DQ203464 [III-Alpha1-SAR116/Himb100] medHO10E1_env_samples_DQ203464 gi|77547376|gb|DQ203464| Uncultured bacterium clone medHO10E1 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10E1 predicted proteorhodopsin gene, partial cds DQ203464 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/SAR116 Himb100-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 SAR116 Himb100-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATAGACTGGCTGATTACTGTGCCACTGCTGATGATCGAGTTTTATCTGGTACTGCGGGCGATTACAAATGTATCAGGCGGCGTCTTCTGGCGTCTGACCATCGGTACCCTGGTCATGCTGATCGGTGGTTACCTGGGTGAAGCCGGTTACATGAACGTAACTCTGGGCTTTGTCATTGGTATGGTCGGTTGGGCCTACATTCTGTATGAAATCTTTGCTGGTGAAGCTGGCAAGGTGGCTGCAGAACATGCAAAGCCATCAGTACAGTCTGCCTATTCAACCATGCGCTGGATTGTAACCATCGGGTGGGCCATATATCCA RYIDWLITVPLLMIEFYLVLRAITNVSGGVFWRLTIGTLVMLIGGYLGEAGYMNVTLGFVIGMVGWAYILYEIFAGEAGKVAAEHAKPSVQSAYSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATTACTGTGCCACTGCTGATGATCGAGTTTTATCTGGTACTGCGGGCG---------ATT---ACAAATGTATCAGGC---GGCGTC------------------------------------TTCTGGCGT---CTGACCATCGGTACCCTGGTCATGCTGATCGGTGGTTACCTGGGTGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACGTA------------------ACTCTGGGC---TTTGTCATTGGTATGGTCGGTTGGGCCTACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTGGCTGCAGAA------CAT---GCAAAGCCATCAGTA---CAG---TCT---GCC---TAT---TCA---ACCATG---CGCTGGATTGTAACCATC---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMIEFYLVLRA---I-TNVSG-GV------------FWR-LTIGTLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TLG-FVIGMVGWAYILYEI-----F--A-GEAGKVAAE--H-AKPSV-Q-S-A-Y-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha1-SAR116/Himb100]_DQ203375 [III-Alpha1-SAR116/Himb100] MedHO102D10_env_samples_DQ203375 gi|77547198|gb|DQ203375| Uncultured bacterium clone MedHO102D10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102D10 predicted proteorhodopsin gene, partial cds DQ203375 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/SAR116 Himb100-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 SAR116 Himb100-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATAGATTGGCTGATTACTGTGCCACTGCTGATGATCGAGTTTTATCTGGTACTGCGGGCGATTACAAATGTATCAGGCGGCGTCTTCTGGCGTCTGACCATCGGTACCCTGGTCATGCTGATCGGTGGTTACCTGGGTGAAGCCGGTTACATGAACGTAACTCTGGGCTTTGTCATTGGTATGGTCGGTTGGGCCTACATTCTGTATGAAATCTTTGCTGGTGAAGCTGGCAAGGTGGCTGCAGAACATGCAAAACCATCAGTACAGTCTGCCTATTCAACCATGCGCTGGATTGTAACCATCGGTTGGGCCATTTATCCA SYIDWLITVPLLMIEFYLVLRAITNVSGGVFWRLTIGTLVMLIGGYLGEAGYMNVTLGFVIGMVGWAYILYEIFAGEAGKVAAEHAKPSVQSAYSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATAGATTGG------------------------CTGATTACTGTGCCACTGCTGATGATCGAGTTTTATCTGGTACTGCGGGCG---------ATT---ACAAATGTATCAGGC---GGCGTC------------------------------------TTCTGGCGT---CTGACCATCGGTACCCTGGTCATGCTGATCGGTGGTTACCTGGGTGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACGTA------------------ACTCTGGGC---TTTGTCATTGGTATGGTCGGTTGGGCCTACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTGGCTGCAGAA------CAT---GCAAAACCATCAGTA---CAG---TCT---GCC---TAT---TCA---ACCATG---CGCTGGATTGTAACCATC---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMIEFYLVLRA---I-TNVSG-GV------------FWR-LTIGTLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TLG-FVIGMVGWAYILYEI-----F--A-GEAGKVAAE--H-AKPSV-Q-S-A-Y-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha1-SAR116/Himb100]_DQ422217 [III-Alpha1-SAR116/Himb100] clone_med-0m-f8_DQ422217 gi|90023954|gb|DQ422217| Uncultured bacterium clone med-0m-f8 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-f8 putative proteorhodopsin gene, partial cds. DQ422217 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/SAR116 Himb100-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 SAR116 Himb100-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na CGATACATAGACTGGCTGATTACTGTGCCACTGCTGATGATCGAGTTTTATCTGGTACTGCGGGCGATTACAAATGTATCAGGCGGCGTCTTCTGGCGTCTGACCATCGGTACCCTGGTCATGCTGATCGGTGGTTACCTGGGTGAAGCCGGTTACATGAACGTAACTCTGGGCTTTGTCATTGGTATGGTCGGTTGGGCCTACATTCTGTATGAAATCTTTGCTGGTGAAGCTGGCAAGGTGGCTGCAGAACATGCAAAACCATCAGTACAGTCTGCCTATTCAACCATGCGCTGGATTGTAACCATCGGTTGGGCTATTTATCCA RYIDWLITVPLLMIEFYLVLRAITNVSGGVFWRLTIGTLVMLIGGYLGEAGYMNVTLGFVIGMVGWAYILYEIFAGEAGKVAAEHAKPSVQSAYSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATAGACTGG------------------------CTGATTACTGTGCCACTGCTGATGATCGAGTTTTATCTGGTACTGCGGGCG---------ATT---ACAAATGTATCAGGC---GGCGTC------------------------------------TTCTGGCGT---CTGACCATCGGTACCCTGGTCATGCTGATCGGTGGTTACCTGGGTGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACGTA------------------ACTCTGGGC---TTTGTCATTGGTATGGTCGGTTGGGCCTACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTGGCTGCAGAA------CAT---GCAAAACCATCAGTA---CAG---TCT---GCC---TAT---TCA---ACCATG---CGCTGGATTGTAACCATC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMIEFYLVLRA---I-TNVSG-GV------------FWR-LTIGTLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TLG-FVIGMVGWAYILYEI-----F--A-GEAGKVAAE--H-AKPSV-Q-S-A-Y-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha1-SAR116/Himb100]_DQ203352 [III-Alpha1-SAR116/Himb100] MedHO102B1_env_samples_DQ203352 gi|77547152|gb|DQ203352| Uncultured bacterium clone MedHO102B1 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102B1 predicted proteorhodopsin gene, partial cds DQ203352 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/SAR116 Himb100-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 SAR116 Himb100-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGCTACATTGACTGGCTGATTACTGTGCCACTGCTGATGATCGAGTTTTATCTGGTACTGCGGGCGATTACAAATGTATCAGGCGGCGTCTTCTGGCGTCTGACCATCGGTACCCTGGTCATGCTGATCGGTGGTTACCTGGGTGAAGCCGGTTACATGAACGTAACTTTGGGCTTTGTCATTGGTATGGTCGGTTGGGCCTACATTCTGTATGAAATCTTTGCTGGTGAAGCTGGCAAGGTGGCTGCAGAACATGAAAAGCCATCAGTACAGGCTGCCTATTCAACCATGCGCTGGATTGTAACCATCGGTTGGGCCATTTATCCA RYIDWLITVPLLMIEFYLVLRAITNVSGGVFWRLTIGTLVMLIGGYLGEAGYMNVTLGFVIGMVGWAYILYEIFAGEAGKVAAEHEKPSVQAAYSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTACATTGACTGG------------------------CTGATTACTGTGCCACTGCTGATGATCGAGTTTTATCTGGTACTGCGGGCG---------ATT---ACAAATGTATCAGGC---GGCGTC------------------------------------TTCTGGCGT---CTGACCATCGGTACCCTGGTCATGCTGATCGGTGGTTACCTGGGTGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACGTA------------------ACTTTGGGC---TTTGTCATTGGTATGGTCGGTTGGGCCTACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTGGCTGCAGAA------CAT---GAAAAGCCATCAGTA---CAG---GCT---GCC---TAT---TCA---ACCATG---CGCTGGATTGTAACCATC---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMIEFYLVLRA---I-TNVSG-GV------------FWR-LTIGTLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TLG-FVIGMVGWAYILYEI-----F--A-GEAGKVAAE--H-EKPSV-Q-A-A-Y-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha1-SAR116/Himb100]_DQ203630 [III-Alpha1-SAR116/Himb100] medHO120E8_env_samples_DQ203630 gi|77547708|gb|DQ203630| Uncultured bacterium clone medHO120E8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120E8 predicted proteorhodopsin gene, partial cds DQ203630 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/SAR116 Himb100-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 SAR116 Himb100-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATACATTGACTGGCTGATTACTGTGCCACTGCTGATGATCGAGTTTTATCTGGTACTGCGGGCGATTACAAATGTATCAGGCGGCGTCTTCTGGCGTCTGACCATCGGTACCCTGGTCATGCTGATCGGTGGTTACCTGGGTGAAGCCGGTTACATGAACGTAACTCTGGGCTTTGTCATTGGTATGGTCGGTTGGGCCTACATTCTGTATGAAATCTTTGCTGGTGAAGCTGGCAAGGTGGCTGCAGAACATGCAAAGCCATCAGTACAGTCTGCCTATTCAACCATGCGCTGGATTGTAACCATCGGGTGGGCGATCTACCCA RYIDWLITVPLLMIEFYLVLRAITNVSGGVFWRLTIGTLVMLIGGYLGEAGYMNVTLGFVIGMVGWAYILYEIFAGEAGKVAAEHAKPSVQSAYSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATTGACTGG------------------------CTGATTACTGTGCCACTGCTGATGATCGAGTTTTATCTGGTACTGCGGGCG---------ATT---ACAAATGTATCAGGC---GGCGTC------------------------------------TTCTGGCGT---CTGACCATCGGTACCCTGGTCATGCTGATCGGTGGTTACCTGGGTGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACGTA------------------ACTCTGGGC---TTTGTCATTGGTATGGTCGGTTGGGCCTACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTGGCTGCAGAA------CAT---GCAAAGCCATCAGTA---CAG---TCT---GCC---TAT---TCA---ACCATG---CGCTGGATTGTAACCATC---------------------------------------------------------------GGGTGG---------GCGATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMIEFYLVLRA---I-TNVSG-GV------------FWR-LTIGTLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TLG-FVIGMVGWAYILYEI-----F--A-GEAGKVAAE--H-AKPSV-Q-S-A-Y-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha1-SAR116/Himb100]_1105085534971 [III-Alpha1-SAR116/Himb100] JCVI_ORF_1105085534971_GS051_Coral_Reef_Atoll_1m jcvi|1105085534971| 1105085534971 JCVI ORF 1105085534971 1105085534971 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/SAR116 Himb100-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 SAR116 Himb100-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 22-MAY-2004 Coral_Reef_Atoll/1m_depth/S_34.2_psu/GS051/Rangirora_Atoll/Polynesia_Archipelagos Pacific Ocean marine -15.143611 -147.435 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf GAGGGTTGGACGATGCTCAATAACCTTTTTAAGTTTGCTGCACCTGCAGCGCTTATGTCCATGATGCCTGCAATCGCTCAGGCTGCAAATCTGGAATCAGATGATTTCGTTGGCATCAGCTTCTGGCTGATCTCAATGGCTCTGGTTGCGTCAACAGCTTTCTTCTTCCTGGAAACACAGCGTGTGGCCGGCAAGTGGAAAACATCTCTTGTCGTATCAGGGCTGGTCACACTGGTTGCCGCTGTTCACTATTTCTATATGCGTGACGTGTGGGTAGCCACAGGTGACACACCAACAGTCTATCGTTACATCGACTGGCTGATTACTGTGCCACTGCTGATGATCGAGTTTTATCTGGTCCTGCGGGCGATTACAAATGTATCAGGCGGCGTCTTCTGGCGTCTGACCATCGGTACACTGGTCATGCTGATCGGTGGTTACATGGGTGAAGCCGGTTACATGAACGTAACACTGGGCTTTGTCATCGGTATGGTTGGTTGGGCCTATATTCTGTATGAAATCTTTGCTGGTGAAGCCGGTAAGGTTGCTGCAGAACATGCCAAGCCATCAGTACAGTCTGCCTATTCAACCATGCGCTGGATTGTGACCATCGGCTGGGCGATTTACCCGCTGGGTTACTTCTTCGGCTACATGGCTGGCGGTGCAGATATGGCATCACTGAACATCATCTACAATCTGGCTGACGTGCTGAACAAGATTGCGTTCGGTGTGATCATCTGGAACGTAGCTGTGACAGATACAGAAGCAGAAGCC EGWTMLNNLFKFAAPAALMSMMPAIAQAANLESDDFVGISFWLISMALVASTAFFFLETQRVAGKWKTSLVVSGLVTLVAAVHYFYMRDVWVATGDTPTVYRYIDWLITVPLLMIEFYLVLRAITNVSGGVFWRLTIGTLVMLIGGYMGEAGYMNVTLGFVIGMVGWAYILYEIFAGEAGKVAAEHAKPSVQSAYSTMRWIVTIGWAIYPLGYFFGYMAGGADMASLNIIYNLADVLNKIAFGVIIWNVAVTDTEAEA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGGGTTGGACGATGCTCAATAACCTTTTTAAGTTTGCTGCACCTGCAGCGCTTATGTCCATGATGCCTGCAATCGCTCAGGCTGCAAATCTGGAATCAGATGATTTCGTTGGCATCAGCTTCTGGCTGATCTCAATGGCTCTGGTTGCGTCAACAGCTTTCTTCTTCCTGGAAACACAGCGTGTGGCCGGC---AAGTGGAAAACATCTCTTGTCGTATCAGGGCTGGTCACACTGGTTGCCGCTGTTCACTATTTCTATATGCGTGACGTGTGGGTA------------------------------GCCACA---------------------GGTGACACACCAACAGTCTATCGTTACATCGACTGG------------------------CTGATTACTGTGCCACTGCTGATGATCGAGTTTTATCTGGTCCTGCGGGCG---------ATT---ACAAATGTATCAGGC---GGCGTC------------------------------------TTCTGGCGT---CTGACCATCGGTACACTGGTCATGCTGATCGGTGGTTACATGGGTGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACGTA------------------ACACTGGGC---TTTGTCATCGGTATGGTTGGTTGGGCCTATATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCCGGTAAGGTTGCTGCAGAA------CAT---GCCAAGCCATCAGTA---CAG---TCT---GCC---TAT---TCA---ACCATG---CGCTGGATTGTGACCATC---------------------------------------------------------------GGCTGG---------GCGATTTACCCGCTGGGTTACTTCTTCGGCTACATG---------------------------------------GCTGGCGGTGCAGATATGGCATCACTGAACATCATCTACAATCTGGCTGACGTGCTGAACAAGATTGCGTTCGGTGTGATCATCTGGAACGTAGCTGTGACAGAT---ACAGAAGCAGAAGCC------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------EGWTMLNNLFKFAAPAALMSMMPAIAQAANLESDDFVGISFWLISMALVASTAFFFLETQRVAG-KWKTSLVVSGLVTLVAAVHYFYMRDVWV----------AT-------GDTPTVYRYIDW--------LITVPLLMIEFYLVLRA---I-TNVSG-GV------------FWR-LTIGTLVMLIGGYMGE---A------G--Y-----------M----------------------NV------TLG-FVIGMVGWAYILYEI-----F--A-GEAGKVAAE--H-AKPSV-Q-S-A-Y-S-TM-RWIVTI---------------------GW---AIYPLGYFFGYM-------------AGGADMASLNIIYNLADVLNKIAFGVIIWNVAVTD-TEAEA------------------------------------ [III-Alpha1-SAR116/Himb100]_AFXB01000010 [III-Alpha1-SAR116/Himb100] SAR116_cluster_Alphaproteobacteria_HIMB100_contig10_genome_NZ_AFXB01000010 gi|356675306|gb|AFXB01000010| SAR116 cluster alpha proteobacterium HIMB100 contig10, whole genome shotgun sequence SAR116 cluster alpha proteobacterium HIMB100 contig10, whole genome shotgun sequence AFXB01000010 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/SAR116 Himb100-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 SAR116 Himb100-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Alphaproteobacteria/SAR116 cluster] taxon:909943 genomic_DNA strain 10-nov-11 #na #na Pacific Ocean marine 21.44 -157.78 Draft genome sequence of strain HIMB100, a cultured representative of the SAR116 clade of marine Alphaproteobacteria Grote,J., Bayindirli,C., Bergauer,K., Carpintero de Moraes,P., Chen,H., DAmbrosio,L., Edwards,B., FernandezGomez,B., Hamisi,M., Logares,R., Nguyen,D., Rii,Y.M., Saeck,E., Schutte,C., Widner,B., Church,M.J., Steward,G.F., Karl,D.M., Delong,E.F., Eppley,J.M., Schuster,S.C., Kyrpides,N.C. and Rappe,M.S. Stand Genomic Sci 5 (3), 269278 (2011) 22675578 #na ATGTCAAAAAACCTTTTTAAGTTTGCTGCACCTGCAGCGCTTATGTCTATGATGCCTGCAATTGCTCAGGCTGCTAATCTGGAATCAGATGATTTTGTTGGTATCAGCTTCTGGCTGATCTCAATGGCTCTGGTTGCGTCAACAGCTTTCTTCTTCTTGGAAACACAGCGTGTAGCCGGTAAGTGGAAGACATCTCTTGTCGTATCAGGACTGGTCACACTGGTTGCCGCTGTTCACTATTTCTACATGCGTGACGTGTGGGTAGCCACAGGCGACACACCAACAGTCTATCGTTATATCGACTGGCTGATTACTGTGCCGCTGCTGATGATCGAATTTTATCTGGTGCTGCGGGCGATTACAAATGTATCAGGCGGCGTCTTCTGGCGTTTGACCATTGGTACATTGGTGATGCTGATCGGTGGTTACCTGGGTGAAGCTGGTTACATGAATGTAACACTGGGCTTCGTCATTGGTATGGTCGGTTGGGCCTATATTCTGTATGAAATCTTTGCTGGTGAAGCTGGCAAGGTGGCTGCAGAACATGCCAAGCCATCAGTACAGTCTGCTTATTCAACCATGCGCTGGATTGTAACAATCGGTTGGGCAATTTACCCGCTGGGTTACTTCTTCGGCTACATGGCTGGCGGTGCAGATATGGCATCACTGAACATCATCTACAACTTGGCTGACGTGCTGAACAAAATTGCGTTCGGTGTGATCATCTGGAACGTAGCTGTGACAGAAACAGAAGCAGAAGCC MSKNLFKFAAPAALMSMMPAIAQAANLESDDFVGISFWLISMALVASTAFFFLETQRVAGKWKTSLVVSGLVTLVAAVHYFYMRDVWVATGDTPTVYRYIDWLITVPLLMIEFYLVLRAITNVSGGVFWRLTIGTLVMLIGGYLGEAGYMNVTLGFVIGMVGWAYILYEIFAGEAGKVAAEHAKPSVQSAYSTMRWIVTIGWAIYPLGYFFGYMAGGADMASLNIIYNLADVLNKIAFGVIIWNVAVTETEAEA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTCAAAAAACCTTTTTAAGTTTGCTGCACCTGCAGCGCTTATGTCTATGATGCCTGCAATTGCTCAGGCTGCTAATCTGGAATCAGATGATTTTGTTGGTATCAGCTTCTGGCTGATCTCAATGGCTCTGGTTGCGTCAACAGCTTTCTTCTTCTTGGAAACACAGCGTGTAGCCGGT---AAGTGGAAGACATCTCTTGTCGTATCAGGACTGGTCACACTGGTTGCCGCTGTTCACTATTTCTACATGCGTGACGTGTGGGTA------------------------------GCCACA---------------------GGCGACACACCAACAGTCTATCGTTATATCGACTGG------------------------CTGATTACTGTGCCGCTGCTGATGATCGAATTTTATCTGGTGCTGCGGGCG---------ATT---ACAAATGTATCAGGC---GGCGTC------------------------------------TTCTGGCGT---TTGACCATTGGTACATTGGTGATGCTGATCGGTGGTTACCTGGGTGAA---------GCT------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTGGGC---TTCGTCATTGGTATGGTCGGTTGGGCCTATATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTGGCTGCAGAA------CAT---GCCAAGCCATCAGTA---CAG---TCT---GCT---TAT---TCA---ACCATG---CGCTGGATTGTAACAATC---------------------------------------------------------------GGTTGG---------GCAATTTACCCGCTGGGTTACTTCTTCGGCTACATG---------------------------------------GCTGGCGGTGCAGATATGGCATCACTGAACATCATCTACAACTTGGCTGACGTGCTGAACAAAATTGCGTTCGGTGTGATCATCTGGAACGTAGCTGTGACAGAA---ACAGAAGCAGAAGCC------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------MSKNLFKFAAPAALMSMMPAIAQAANLESDDFVGISFWLISMALVASTAFFFLETQRVAG-KWKTSLVVSGLVTLVAAVHYFYMRDVWV----------AT-------GDTPTVYRYIDW--------LITVPLLMIEFYLVLRA---I-TNVSG-GV------------FWR-LTIGTLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TLG-FVIGMVGWAYILYEI-----F--A-GEAGKVAAE--H-AKPSV-Q-S-A-Y-S-TM-RWIVTI---------------------GW---AIYPLGYFFGYM-------------AGGADMASLNIIYNLADVLNKIAFGVIIWNVAVTE-TEAEA------------------------------------ [III-Alpha1-SAR116/Himb100]_1105131441934 [III-Alpha1-SAR116/Himb100] JCVI_ORF_1105131441934 jcvi|1105131441934| 1105131441934 JCVI ORF 1105131441934 1105131441934 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/SAR116 Himb100-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 SAR116 Himb100-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 04-FEB-2004 Coastal/2m_depth/S_n.a/GS028/Coastal_Floreana/Galapagos_Islands Pacific Ocean marine -1.2169445 -90.319725 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGTCAAAAAACCTTTTTAAGTTTGCAGTTCCTGCAACACTTATGACTATGATGCCTGCTATTGCTCAGGCAGAAAACCTGAAATCTGACGATTTCGTTGGCATCAGCTTCTGGCTGATCTCAATGGCTCTGATTGCGTCAACAGCTTTCTTCTTCTTGGAAACACAGCGTGTAGCCGGTAAGTGGAAAACTTCACTTGTAGTATCAGGGCTGGTTACGTTAGTTGCCGCAGTTCACTATTTTTATATGCGTGACGTTTGGGTGGCCACTGGCGACACACCGACGGTGTATCGTTACATTGATTGGTTAATCACTGTGCCATTGCTGATGATTGAATTCTATCTCATTTTGCGGGCGATTACTAATGTGTCTGGCGGCGTATTCTGGCGTCTGACCATCGGTACGCTCGTGATGTTGATTGGCGGTTACCTCGGCGAAGCTGGTTACATGAATGTTACCCTTGGCTTTGTGATAGGTATGGTCGGTTGGGCCTATATTCTGTATGAAATCTTTGCTGGTGAAGCTGGCAAGGTTGCTGCTGAACATGCCAAGCCATCAGTTGCCTCAGCTTACTCTACCATGCGCTGGATTGTAACAATCGGTTGGGCGATCTACCCGCTGGGTTACTTCTTTGGGTACATGGCCGGCGGTGCAGATATGGCATCACTGAATATCTCTCAGCTA MSKNLFKFAVPATLMTMMPAIAQAENLKSDDFVGISFWLISMALIASTAFFFLETQRVAGKWKTSLVVSGLVTLVAAVHYFYMRDVWVATGDTPTVYRYIDWLITVPLLMIEFYLILRAITNVSGGVFWRLTIGTLVMLIGGYLGEAGYMNVTLGFVIGMVGWAYILYEIFAGEAGKVAAEHAKPSVASAYSTMRWIVTIGWAIYPLGYFFGYMAGGADMASLNISQL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTCAAAAAACCTTTTTAAGTTTGCAGTTCCTGCAACACTTATGACTATGATGCCTGCTATTGCTCAGGCAGAAAACCTGAAATCTGACGATTTCGTTGGCATCAGCTTCTGGCTGATCTCAATGGCTCTGATTGCGTCAACAGCTTTCTTCTTCTTGGAAACACAGCGTGTAGCCGGT---AAGTGGAAAACTTCACTTGTAGTATCAGGGCTGGTTACGTTAGTTGCCGCAGTTCACTATTTTTATATGCGTGACGTTTGGGTG------------------------------GCCACT---------------------GGCGACACACCGACGGTGTATCGTTACATTGATTGG------------------------TTAATCACTGTGCCATTGCTGATGATTGAATTCTATCTCATTTTGCGGGCG---------ATT---ACTAATGTGTCTGGC---GGCGTA------------------------------------TTCTGGCGT---CTGACCATCGGTACGCTCGTGATGTTGATTGGCGGTTACCTCGGCGAA---------GCT------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTT------------------ACCCTTGGC---TTTGTGATAGGTATGGTCGGTTGGGCCTATATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTTGCTGCTGAA------CAT---GCCAAGCCATCAGTT---GCC---TCA---GCT---TAC---TCT---ACCATG---CGCTGGATTGTAACAATC---------------------------------------------------------------GGTTGG---------GCGATCTACCCGCTGGGTTACTTCTTTGGGTACATG---------------------------------------GCCGGCGGTGCAGATATGGCATCACTGAATATCTCTCAGCTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------MSKNLFKFAVPATLMTMMPAIAQAENLKSDDFVGISFWLISMALIASTAFFFLETQRVAG-KWKTSLVVSGLVTLVAAVHYFYMRDVWV----------AT-------GDTPTVYRYIDW--------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LTIGTLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TLG-FVIGMVGWAYILYEI-----F--A-GEAGKVAAE--H-AKPSV-A-S-A-Y-S-TM-RWIVTI---------------------GW---AIYPLGYFFGYM-------------AGGADMASLNISQL--------------------------------------------------------------- [III-Alpha1-SAR116/Himb100]_1105097700810 [III-Alpha1-SAR116/Himb100] JCVI_ORF_1105097700810 jcvi|1105097700810| 1105097700810 JCVI ORF 1105097700810 1105097700810 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/SAR116 Himb100-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 SAR116 Himb100-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 19-janv-04 Coastal/2m_depth/S_30.7_psu/GS021/Gulf_of_Panama/Eastern_Tropical_Pacific Pacific Ocean marine 8.129167 -79.69111 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGTCAATAAAAAAACTTTTTAAGTTCACTGCACCCGCAGCTGTACTTTCAATGATGCCTGCAATCGCGCAGGCAGCTAACTTGGAATCTGACGATTTCGTGGGCATCAGCTTCTGGCTGATCTCAATGGCTCTTGTAGCCGCAACTGCTTTCTTCTTTCTCGAAACACAAAGAGTTGAAGCAAAGTGGAAGACCTCACTTGTTGTGTCAGGTCTTGTAACACTGGTTGCTGCTGTACACTATTTCTATATGAGAGACGTGTGGGTAGCCACAGGTGATACACCAACAGTCTATCGTTACATAGACTGGCTAATTACAGTGCCATTGCTGATGATCGAATTCTACCTGATCCTGCGTGCGATTACCAATGTATCCGGCGGCATTTTCTGGCGTCTGACCATTGGTACATTGGTCATGCTGATCGGTGGTTACCTCGGCGAAGCCGGTTACATGAATGTAACGCTTGGCTTTGTTATCGGTATGGTCGGTTGGGCATACATTCTCTATGAAATCTTTGCTGGTGAAGCTGGCAAGGTTGCAGCAGAGAAAGCCTCACCTGCAGTGGCTTCAGCATATTCAACAATGCGTTGGATTGTGACCATTGGTTGGGCGATTTATCCGCTTGGCTACTTCTTCGGCTACATGGCCGGCGGTGCCGACATGGCATCT MSIKKLFKFTAPAAVLSMMPAIAQAANLESDDFVGISFWLISMALVAATAFFFLETQRVEAKWKTSLVVSGLVTLVAAVHYFYMRDVWVATGDTPTVYRYIDWLITVPLLMIEFYLILRAITNVSGGIFWRLTIGTLVMLIGGYLGEAGYMNVTLGFVIGMVGWAYILYEIFAGEAGKVAAEKASPAVASAYSTMRWIVTIGWAIYPLGYFFGYMAGGADMAS ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTCAATAAAAAAACTTTTTAAGTTCACTGCACCCGCAGCTGTACTTTCAATGATGCCTGCAATCGCGCAGGCAGCTAACTTGGAATCTGACGATTTCGTGGGCATCAGCTTCTGGCTGATCTCAATGGCTCTTGTAGCCGCAACTGCTTTCTTCTTTCTCGAAACACAAAGAGTTGAAGCA---AAGTGGAAGACCTCACTTGTTGTGTCAGGTCTTGTAACACTGGTTGCTGCTGTACACTATTTCTATATGAGAGACGTGTGGGTA------------------------------GCCACA---------------------GGTGATACACCAACAGTCTATCGTTACATAGACTGG------------------------CTAATTACAGTGCCATTGCTGATGATCGAATTCTACCTGATCCTGCGTGCG---------ATT---ACCAATGTATCCGGC---GGCATT------------------------------------TTCTGGCGT---CTGACCATTGGTACATTGGTCATGCTGATCGGTGGTTACCTCGGCGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTTGGC---TTTGTTATCGGTATGGTCGGTTGGGCATACATTCTCTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTTGCAGCAGAG------AAA---GCCTCACCTGCAGTG---GCT---TCA---GCA---TAT---TCA---ACAATG---CGTTGGATTGTGACCATT---------------------------------------------------------------GGTTGG---------GCGATTTATCCGCTTGGCTACTTCTTCGGCTACATG---------------------------------------GCCGGCGGTGCCGACATGGCATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------MSIKKLFKFTAPAAVLSMMPAIAQAANLESDDFVGISFWLISMALVAATAFFFLETQRVEA-KWKTSLVVSGLVTLVAAVHYFYMRDVWV----------AT-------GDTPTVYRYIDW--------LITVPLLMIEFYLILRA---I-TNVSG-GI------------FWR-LTIGTLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TLG-FVIGMVGWAYILYEI-----F--A-GEAGKVAAE--K-ASPAV-A-S-A-Y-S-TM-RWIVTI---------------------GW---AIYPLGYFFGYM-------------AGGADMAS--------------------------------------------------------------------- [III-Alpha1-SAR116/Himb100]_DQ203541 [III-Alpha1-SAR116/Himb100] MedHO1202E2_env_samples_DQ203541 gi|77547530|gb|DQ203541| Uncultured bacterium clone MedHO1202E2 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202E2 predicted proteorhodopsin gene, partial cds DQ203541 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/SAR116 Himb100-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 SAR116 Himb100-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGATTGGCTGATTACAGTGCCGCTACTTATGATCGAATTCTATTTGGTCCTGCGGGCTATTACCAATGTTTCCGGCGGCGTATTCTGGCGTCTGACCATTGGTTCACTGGTCATGCTAATCGGTGGTTACATGGGCGAAGCAGGTTACATGAATGTAACGCTTGGTTTTGTAATCGGTATGGTTGGTTGGGCCTACATCCTGTATGAAATCTTCGCAGGTGAAGCAGGCAAGGTGGCCGCAAATGACGCCCCTGCTTCAGTACAATCGGCCTATTCAACAATGCGCTGGATTGTGACAATTGGTTGGGCCATCTATCCA SYIDWLITVPLLMIEFYLVLRAITNVSGGVFWRLTIGSLVMLIGGYMGEAGYMNVTLGFVIGMVGWAYILYEIFAGEAGKVAANDAPASVQSAYSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGATTGG------------------------CTGATTACAGTGCCGCTACTTATGATCGAATTCTATTTGGTCCTGCGGGCT---------ATT---ACCAATGTTTCCGGC---GGCGTA------------------------------------TTCTGGCGT---CTGACCATTGGTTCACTGGTCATGCTAATCGGTGGTTACATGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTTGGT---TTTGTAATCGGTATGGTTGGTTGGGCCTACATCCTGTATGAAATC---------------TTC------GCA---GGTGAAGCAGGCAAGGTGGCCGCAAAT------GAC---GCCCCTGCTTCAGTA---CAA---TCG---GCC---TAT---TCA---ACAATG---CGCTGGATTGTGACAATT---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMIEFYLVLRA---I-TNVSG-GV------------FWR-LTIGSLVMLIGGYMGE---A------G--Y-----------M----------------------NV------TLG-FVIGMVGWAYILYEI-----F--A-GEAGKVAAN--D-APASV-Q-S-A-Y-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha1-SAR116/Himb100]_DQ203645 [III-Alpha1-SAR116/Himb100] medHO120G3_env_samples_DQ203645 gi|77547738|gb|DQ203645| Uncultured bacterium clone medHO120G3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120G3 predicted proteorhodopsin gene, partial cds DQ203645 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/SAR116 Himb100-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 SAR116 Himb100-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTATATTGATTGGCTGATTACAGTGCCGCTACTTATGATCGAATTCTATTTGGTCCTGCGGGCTATTACCAATGTTTCCGGCGGCGTATTCTGGCGTCTGACCATTGGTTCACTGGTCATGCTAATCGGTGGTTACATGGGCGAAGCAGGTTACATGAATGTAACGCTTGGTTTTGTAATCGGTATGGTTGGTTGGGCCTACATCCTGTATGAAATCTTCGCAGGTGAAGCAGGCAAGGTGGCCGCAAATGACGCCCCTGCTTCAGTACAATCGGCCTATTCAACAATGCGCTGGATTGTGACAATTGGTTGGGCCATTTATCCA RYIDWLITVPLLMIEFYLVLRAITNVSGGVFWRLTIGSLVMLIGGYMGEAGYMNVTLGFVIGMVGWAYILYEIFAGEAGKVAANDAPASVQSAYSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTATATTGATTGG------------------------CTGATTACAGTGCCGCTACTTATGATCGAATTCTATTTGGTCCTGCGGGCT---------ATT---ACCAATGTTTCCGGC---GGCGTA------------------------------------TTCTGGCGT---CTGACCATTGGTTCACTGGTCATGCTAATCGGTGGTTACATGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTTGGT---TTTGTAATCGGTATGGTTGGTTGGGCCTACATCCTGTATGAAATC---------------TTC------GCA---GGTGAAGCAGGCAAGGTGGCCGCAAAT------GAC---GCCCCTGCTTCAGTA---CAA---TCG---GCC---TAT---TCA---ACAATG---CGCTGGATTGTGACAATT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMIEFYLVLRA---I-TNVSG-GV------------FWR-LTIGSLVMLIGGYMGE---A------G--Y-----------M----------------------NV------TLG-FVIGMVGWAYILYEI-----F--A-GEAGKVAAN--D-APASV-Q-S-A-Y-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha1-SAR116/Himb100]_DQ203619 [III-Alpha1-SAR116/Himb100] medHO120D7_env_samples_DQ203619 gi|77547686|gb|DQ203619| Uncultured bacterium clone medHO120D7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120D7 predicted proteorhodopsin gene, partial cds DQ203619 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/SAR116 Himb100-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 SAR116 Himb100-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTGATTACAGTGCCGCTACTTATGATCGAATTCTATTTGGTCCTGCGGGCTATTACCAATGTTTCCGGCGGCGTATTCTGGCGTCTGACCATTGGTTCACTGGTCATGCTAATCGGTGGTTACATGGGCGAAGCAGGTTACATGAATGTAACGCTTGGTTTTGTAATCGGTATGGTTGGTTGGGCCTACATCCTGTATGAAATCTTCGCAGGTGAAGCAGGCAAGGTGGCCGCAAATGACGCCCCTGCTTCAGTACAATCGGCCTACTCAACAATGCGCTGGATTGTGACAATTGGTTGGGCCATTTATCCA RYIDWLITVPLLMIEFYLVLRAITNVSGGVFWRLTIGSLVMLIGGYMGEAGYMNVTLGFVIGMVGWAYILYEIFAGEAGKVAANDAPASVQSAYSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTGATTACAGTGCCGCTACTTATGATCGAATTCTATTTGGTCCTGCGGGCT---------ATT---ACCAATGTTTCCGGC---GGCGTA------------------------------------TTCTGGCGT---CTGACCATTGGTTCACTGGTCATGCTAATCGGTGGTTACATGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTTGGT---TTTGTAATCGGTATGGTTGGTTGGGCCTACATCCTGTATGAAATC---------------TTC------GCA---GGTGAAGCAGGCAAGGTGGCCGCAAAT------GAC---GCCCCTGCTTCAGTA---CAA---TCG---GCC---TAC---TCA---ACAATG---CGCTGGATTGTGACAATT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMIEFYLVLRA---I-TNVSG-GV------------FWR-LTIGSLVMLIGGYMGE---A------G--Y-----------M----------------------NV------TLG-FVIGMVGWAYILYEI-----F--A-GEAGKVAAN--D-APASV-Q-S-A-Y-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha1-b]_EF088598 [III-Alpha1-b] E400019_env_samples_EF088598 gi|126843437|gb|EF088598| Uncultured bacterium clone E400019 putative proteorhodopsin gene, partial cds Uncultured bacterium clone E400019 putative proteorhodopsin gene, partial cds EF088598 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na Bering_Sea_surface_water_sample Arctic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGCTGGCCGCTACTGCATTCTTCTTCTTAGAAACACAGCGTGTTTCAGGTAAGTGGAAGACATCTCTTACAGTATCAGGCCTGGTAACTCTTGTTGCCGCTGTTCACTACTTCTACATGCGCGATGTGTGGGTCGCCACTGGCGAAACACCAACCGTCTATCGTTATATTGACTGGCTGATCACAGTACCACTACTGATGATCGAGTTCTACCTTATCCTACGGGCAATTACAGCTGTATCAGGCGGCATCTTCTGGCGCCTGTCTATCGGTACATTAGTAATGCTGGTTGGTGGTTACCTTGGCGAAGCCGGTTACATGAATGTAACTGTTGGTTTTGTTATCGGTATGGCTGGTTGGGCGTACATTCTGTATGAAATCTTTGCTGGTGAAGCTGGCCGGGTTGCATCAGAGCAAGCGTCTGAATCAGTTAAGTCTGCCTTTTCAACAATGCGTTGGATTGTAACAATCGGCTGGGCCATTTACCCA MLAATAFFFLETQRVSGKWKTSLTVSGLVTLVAAVHYFYMRDVWVATGETPTVYRYIDWLITVPLLMIEFYLILRAITAVSGGIFWRLSIGTLVMLVGGYLGEAGYMNVTVGFVIGMAGWAYILYEIFAGEAGRVASEQASESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGCATTCTTCTTCTTAGAAACACAGCGTGTTTCAGGT---AAGTGGAAGACATCTCTTACAGTATCAGGCCTGGTAACTCTTGTTGCCGCTGTTCACTACTTCTACATGCGCGATGTGTGGGTC------------------------------GCCACT---------------------GGCGAAACACCAACCGTCTATCGTTATATTGACTGG------------------------CTGATCACAGTACCACTACTGATGATCGAGTTCTACCTTATCCTACGGGCA---------ATT---ACAGCTGTATCAGGC---GGCATC------------------------------------TTCTGGCGC---CTGTCTATCGGTACATTAGTAATGCTGGTTGGTGGTTACCTTGGCGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTGTTGGT---TTTGTTATCGGTATGGCTGGTTGGGCGTACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCCGGGTTGCATCAGAG------CAA---GCGTCTGAATCAGTT---AAG---TCT---GCC---TTT---TCA---ACAATG---CGTTGGATTGTAACAATC---------------------------------------------------------------GGCTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFLETQRVSG-KWKTSLTVSGLVTLVAAVHYFYMRDVWV----------AT-------GETPTVYRYIDW--------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LSIGTLVMLVGGYLGE---A------G--Y-----------M----------------------NV------TVG-FVIGMAGWAYILYEI-----F--A-GEAGRVASE--Q-ASESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha1-b]_JX863331 [III-Alpha1-b] MALINA_OTU56_350_L_env_samples_JX863331 gi|425477612|gb|JX863331| Uncultured bacterium clone MALINA OTU56 350 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU56 350 L putative proteorhodopsin mRNA, partial cds JX863331 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 02Aug2009 3m_depth Arctic Ocean marine 69.61 -138.23 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTCATCACAGTGCCACTACTGATGATCGAATTCTACCTTATCCTACGGGCAATTACGAACGTATCTGGCGGCATCTTCTGGCGCCTGTCTATCGGTACATTAGTCATGCTGGTTGGTGGTTACCTTGGCGAAGCCGGTTACATGAATGTAACTGTTGGTTTTGTTATCGGTATGGCTGGTTGGGCATACATTCTGTATGAAATCTTTGCTGGTGAAGCCGGCCGGGTTGCATCAGAGCAAGCGTCTGACTCAGTTAAGTCTGCGTTTTCAACAATGCGTTGGATTGTAACAATC WLITVPLLMIEFYLILRAITNVSGGIFWRLSIGTLVMLVGGYLGEAGYMNVTVGFVIGMAGWAYILYEIFAGEAGRVASEQASDSVKSAFSTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTCATCACAGTGCCACTACTGATGATCGAATTCTACCTTATCCTACGGGCA---------ATT---ACGAACGTATCTGGC---GGCATC------------------------------------TTCTGGCGC---CTGTCTATCGGTACATTAGTCATGCTGGTTGGTGGTTACCTTGGCGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTGTTGGT---TTTGTTATCGGTATGGCTGGTTGGGCATACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCCGGCCGGGTTGCATCAGAG------CAA---GCGTCTGACTCAGTT---AAG---TCT---GCG---TTT---TCA---ACAATG---CGTTGGATTGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFYLILRA---I-TNVSG-GI------------FWR-LSIGTLVMLVGGYLGE---A------G--Y-----------M----------------------NV------TVG-FVIGMAGWAYILYEI-----F--A-GEAGRVASE--Q-ASDSV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-a]_KJ926121 [III-Alpha1-a] BOUM_OTU034_env_samples gb|KJ926121| Uncultured bacterium clone BOUM OTU034 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU034 putative proteorhodopsin gene, partial cds KJ926121 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 34.046 24.49733 #na #na #na #na #na GTTGACTGGTTAATCACAGTTCCACTATTGATGATCGAGTTCTACTTAATCCTACGAGCTATTACAAATGTATCTGGCGGCGTTTTCTGGCGTCTTACAGTTGGTACATTGATTATGCTTATCGGTGGTTACCTAGGTGAAGCTGGTTACATGAACGTAACAGTTGCTTTCATCATTGGAATGGCTGGTTGGGCATACATCTTGTATGAAATCTTCGCGGGTGAAGCTGGACGTGTTGCAGCAGACGAAGCACCAGAGTCAGTTAAATCAGCTTACTCAACAATGCGTTGGATTGTAACAATCGGCTGGGCCATCTAC VDWLITVPLLMIEFYLILRAITNVSGGVFWRLTVGTLIMLIGGYLGEAGYMNVTVAFIIGMAGWAYILYEIFAGEAGRVAADEAPESVKSAYSTMRWIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGACTGG------------------------TTAATCACAGTTCCACTATTGATGATCGAGTTCTACTTAATCCTACGAGCT---------ATT---ACAAATGTATCTGGC---GGCGTT------------------------------------TTCTGGCGT---CTTACAGTTGGTACATTGATTATGCTTATCGGTGGTTACCTAGGTGAA---------GCT------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACGTA------------------ACAGTTGCT---TTCATCATTGGAATGGCTGGTTGGGCATACATCTTGTATGAAATC---------------TTC------GCG---GGTGAAGCTGGACGTGTTGCAGCAGAC------GAA---GCACCAGAGTCAGTT---AAA---TCA---GCT---TAC---TCA---ACAATG---CGTTGGATTGTAACAATC---------------------------------------------------------------GGCTGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LTVGTLIMLIGGYLGE---A------G--Y-----------M----------------------NV------TVA-FIIGMAGWAYILYEI-----F--A-GEAGRVAAD--E-APESV-K-S-A-Y-S-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Alpha1-a]_EU079209 [III-Alpha1-a] NASB_71_env_samples_EU079209 gi|156106578|gb|EU079209| Uncultured organism clone NASB 71 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 71 putative proteorhodopsin gene, partial cds EU079209 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGTTATGTAGATTGGTTAATCACAGTTCCACTATTGATGATCGAGTTCTACTTAATCCTACGAGCTATTACAAATGTATCTGGCGGCGTCTTCTGGCGTCTTACAATCGGTACATTAATTATGCTTATCGGTGGTTACCTAGGTGAAGCTGGTTACTTAAACGTAACAGTTGCTTTCATCATTGGAATGGCTGGTTGGGCGTACATATTGTATGAAATCTTCGCAGGTGAAGCTGGACGTGTTGCAGCAGACGAAGCACCAGAGTCAGTTAAAGCAGCTTACTCAACAATGCGTTGGATTGTAACAATCGGGTGGGCCATTTAC RYVDWLITVPLLMIEFYLILRAITNVSGGVFWRLTIGTLIMLIGGYLGEAGYLNVTVAFIIGMAGWAYILYEIFAGEAGRVAADEAPESVKAAYSTMRWIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTATGTAGATTGG------------------------TTAATCACAGTTCCACTATTGATGATCGAGTTCTACTTAATCCTACGAGCT---------ATT---ACAAATGTATCTGGC---GGCGTC------------------------------------TTCTGGCGT---CTTACAATCGGTACATTAATTATGCTTATCGGTGGTTACCTAGGTGAA---------GCT------------------GGT------TAC---------------------------------TTA------------------------------------------------------------------AACGTA------------------ACAGTTGCT---TTCATCATTGGAATGGCTGGTTGGGCGTACATATTGTATGAAATC---------------TTC------GCA---GGTGAAGCTGGACGTGTTGCAGCAGAC------GAA---GCACCAGAGTCAGTT---AAA---GCA---GCT---TAC---TCA---ACAATG---CGTTGGATTGTAACAATC---------------------------------------------------------------GGGTGG---------GCCATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LTIGTLIMLIGGYLGE---A------G--Y-----------L----------------------NV------TVA-FIIGMAGWAYILYEI-----F--A-GEAGRVAAD--E-APESV-K-A-A-Y-S-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Alpha1-a]_EU915875 [III-Alpha1-a] US80204_env_samples_EU915875 gi|229358632|gb|EU915875| Uncultured microorganism clone US80204 putative proteorhodopsin gene, partial cds Uncultured microorganism clone US80204 putative proteorhodopsin gene, partial cds EU915875 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_surface_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTCGCCGCTACTGTTTTCTTCTTCTTGGAAACACAACGTGTTTCTGATAAGTGGAAAACCTCTCTTGTAGTGTCCGGTCTTGTTTGCTTGATTGCTGCTGTTCACTACTTCTACATGCGTGATGTATGGGTAGCAACGGGTGATACACCAACAGTATATCGCTACATCGATTGGTTAATAACAGTTCCACTATTGATGATCGAGTTCTACATAATCTTACGAGCTATTACAAATGTATCCGGCGGCGTTTTCTGGCGCCTTACAATCGGATCGTTGATAATGCTTATCGGTGGTTACCTGGGGGAAGCTGGTTACATAAATGTAACTGTTGCTTTCATCATTGGAATCGCTGGTTGGGCGTACATTTTGTATGAAATCTTCGCGGGTGAAGCTGGACGTGTTGCAGCAGACGAAGCACCTGAGTCAGTTAAAGCAGCTTTCTCAACTATGCGTTGGATTGTAACAATTGGTTGGGCTATCTAC MVAATVFFFLETQRVSDKWKTSLVVSGLVCLIAAVHYFYMRDVWVATGDTPTVYRYIDWLITVPLLMIEFYIILRAITNVSGGVFWRLTIGSLIMLIGGYLGEAGYINVTVAFIIGIAGWAYILYEIFAGEAGRVAADEAPESVKAAFSTMRWIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCCGCTACTGTTTTCTTCTTCTTGGAAACACAACGTGTTTCTGAT---AAGTGGAAAACCTCTCTTGTAGTGTCCGGTCTTGTTTGCTTGATTGCTGCTGTTCACTACTTCTACATGCGTGATGTATGGGTA------------------------------GCAACG---------------------GGTGATACACCAACAGTATATCGCTACATCGATTGG------------------------TTAATAACAGTTCCACTATTGATGATCGAGTTCTACATAATCTTACGAGCT---------ATT---ACAAATGTATCCGGC---GGCGTT------------------------------------TTCTGGCGC---CTTACAATCGGATCGTTGATAATGCTTATCGGTGGTTACCTGGGGGAA---------GCT------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGTA------------------ACTGTTGCT---TTCATCATTGGAATCGCTGGTTGGGCGTACATTTTGTATGAAATC---------------TTC------GCG---GGTGAAGCTGGACGTGTTGCAGCAGAC------GAA---GCACCTGAGTCAGTT---AAA---GCA---GCT---TTC---TCA---ACTATG---CGTTGGATTGTAACAATT---------------------------------------------------------------GGTTGG---------GCTATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLETQRVSD-KWKTSLVVSGLVCLIAAVHYFYMRDVWV----------AT-------GDTPTVYRYIDW--------LITVPLLMIEFYIILRA---I-TNVSG-GV------------FWR-LTIGSLIMLIGGYLGE---A------G--Y-----------I----------------------NV------TVA-FIIGIAGWAYILYEI-----F--A-GEAGRVAAD--E-APESV-K-A-A-F-S-TM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [III-Alpha1-MEDPR66A3]_DQ062244 [III-Alpha1-MEDPR66A3] MEDPR2C03_env_samples_DQ062244 gi|67483433|gb|DQ062244| Uncultured bacterium clone MEDPR2C03 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR2C03 proteorhodopsin gene, partial cds DQ062244 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/MEDPR66A3-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 MEDPR66A3-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na AGGTATATTGATTGGCTGATCACAGTGCCGCTCTTGATGATTGAGTTTTACTTAATCCTGCGTGCGATTACTAATATCTCGGGTGGCGTTTTCTGGCGTCTAACTGTTGGTTCGCTAATCATGCTCATAGGCGGTTATTTAGGTGAAGCAGGTTACATGAATGTAACTGTGGCATTTGTCATCGGAATGGCTGGCTGGGCATACATCCTGTATGAAATTTTTGCAGGTGAAGCAGGACGTGTTGCTGCCGATGAGGCTCCAGAGTCAGTTAAATCCGCTTACTCAACAATGCGTTGGATTGTGACTATTGGTTGGGCCATTTACCCA RYIDWLITVPLLMIEFYLILRAITNISGGVFWRLTVGSLIMLIGGYLGEAGYMNVTVAFVIGMAGWAYILYEIFAGEAGRVAADEAPESVKSAYSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTATATTGATTGG------------------------CTGATCACAGTGCCGCTCTTGATGATTGAGTTTTACTTAATCCTGCGTGCG---------ATT---ACTAATATCTCGGGT---GGCGTT------------------------------------TTCTGGCGT---CTAACTGTTGGTTCGCTAATCATGCTCATAGGCGGTTATTTAGGTGAA---------GCA------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTGTGGCA---TTTGTCATCGGAATGGCTGGCTGGGCATACATCCTGTATGAAATT---------------TTT------GCA---GGTGAAGCAGGACGTGTTGCTGCCGAT------GAG---GCTCCAGAGTCAGTT---AAA---TCC---GCT---TAC---TCA---ACAATG---CGTTGGATTGTGACTATT---------------------------------------------------------------GGTTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMIEFYLILRA---I-TNISG-GV------------FWR-LTVGSLIMLIGGYLGE---A------G--Y-----------M----------------------NV------TVA-FVIGMAGWAYILYEI-----F--A-GEAGRVAAD--E-APESV-K-S-A-Y-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-Alpha1-MEDPR66A3]_DQ062273 [III-Alpha1-MEDPR66A3] MEDPR66B10_env_samples_DQ062273 gi|67483491|gb|DQ062273| Uncultured bacterium clone MEDPR66B10 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR66B10 proteorhodopsin gene, partial cds DQ062273 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/MEDPR66A3-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 MEDPR66A3-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na AGATACATAGATTGGCTGATCACAGTGCCGCTCTTGATGATTGAGTTTTACTTAATCCTGCGTGCGATTACTAATATCTCGGGTGGTGTTTTCTGGCGTCTAACTGTTGGTTCGCTAATCATGCTCATAGGCGGTTATTTAGGTGAAGCAGGTTACATGAATGTAACTGTGGCATTTGTCATCGGAATGGCTGGCTGGGCATACATCCTGTATGAAATTTTTGCAGGTGAAGCAGGGCGTGTTGCTGCCGATGAGGCTCCAGAGTCAGTTAAATCCGCTTACTCAACAATGCGTTGGATTGTGACTATTGGGTGGACCATTTATCCA RYIDWLITVPLLMIEFYLILRAITNISGGVFWRLTVGSLIMLIGGYLGEAGYMNVTVAFVIGMAGWAYILYEIFAGEAGRVAADEAPESVKSAYSTMRWIVTIGWTIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGATTGG------------------------CTGATCACAGTGCCGCTCTTGATGATTGAGTTTTACTTAATCCTGCGTGCG---------ATT---ACTAATATCTCGGGT---GGTGTT------------------------------------TTCTGGCGT---CTAACTGTTGGTTCGCTAATCATGCTCATAGGCGGTTATTTAGGTGAA---------GCA------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTGTGGCA---TTTGTCATCGGAATGGCTGGCTGGGCATACATCCTGTATGAAATT---------------TTT------GCA---GGTGAAGCAGGGCGTGTTGCTGCCGAT------GAG---GCTCCAGAGTCAGTT---AAA---TCC---GCT---TAC---TCA---ACAATG---CGTTGGATTGTGACTATT---------------------------------------------------------------GGGTGG---------ACCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMIEFYLILRA---I-TNISG-GV------------FWR-LTVGSLIMLIGGYLGE---A------G--Y-----------M----------------------NV------TVA-FVIGMAGWAYILYEI-----F--A-GEAGRVAAD--E-APESV-K-S-A-Y-S-TM-RWIVTI---------------------GW---TIYP-------------------------------------------------------------------------------------------------- [III-Alpha1-MEDPR66A3]_DQ062272 [III-Alpha1-MEDPR66A3] clone_MEDPR66A3_partial_DQ062272 gi|67483489|gb|DQ062272| Uncultured bacterium clone MEDPR66A3 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR66A3 proteorhodopsin gene, partial cds DQ062272 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/MEDPR66A3-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 MEDPR66A3-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na ATGACAATGATTAAAGCAATGAAATTTGCAATTACGACAGGTATACTGTCAATTTTACCTGTAGCCGCGATGGCTGCAGAAAATCTTCAAAGCGATGATTTTGTTGGAATCAGCTTCTGGCTGATATCAATGGCCTTAGTCGCTTCAACGGCCTTCTTCTTTATGGAAACACAACGTGTGTCCGCAAAGTGGAAAACATCATTAGTGGTTTCGGGTCTCGTTACTTTAATTGCCGCGGTGCATTACTTTTATATGCGTGATGTTTGGGTGGCAACAGGAGATACGCCAACGGTTTACCGGTATATCGACTGGCTGATCACAGTGCCGCTCTTGATGATTGAGTTTTACTTAATCCTGCGTGCGATTACTAATATCTCGGGTGGTGTTTTCTGGCGTCTAACTGTTGGTTCGCTAATCATGCTCATAGGCGGTTATTTAGGTGAAGCAGGTTACATGAATGTAACTGTGGCATTTGTCATCGGAATGGCTGGCTGGGCATACATCCTGTATGAAATTTTTGCAGGTGAAGCAGGGCGTGTTGCTGCCGATGAGGCTCCAGAGTCAGTTAAATCCGCTTACTCAACAATGCGTTGGATTGTGACTATTGGTTGGGCAATTTATCCGTTAGGTTACTTCTTCGGATACATGGCTGGTGGTGCCGACATGGCAACACTGAACATTATTTACAACCTTGCAGACGTACTTAACAAAATTGCGTTCGGAGTTATCATCTGGAATGTTGCTGTTACAGAGTCTGAAGCAAAAGCA MTMIKAMKFAITTGILSILPVAAMAAENLQSDDFVGISFWLISMALVASTAFFFMETQRVSAKWKTSLVVSGLVTLIAAVHYFYMRDVWVATGDTPTVYRYIDWLITVPLLMIEFYLILRAITNISGGVFWRLTVGSLIMLIGGYLGEAGYMNVTVAFVIGMAGWAYILYEIFAGEAGRVAADEAPESVKSAYSTMRWIVTIGWAIYPLGYFFGYMAGGADMATLNIIYNLADVLNKIAFGVIIWNVAVTESEAKA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGACAATGATTAAAGCAATGAAATTTGCAATTACGACAGGTATACTGTCAATTTTACCTGTAGCCGCGATGGCTGCAGAAAATCTTCAAAGCGATGATTTTGTTGGAATCAGCTTCTGGCTGATATCAATGGCCTTAGTCGCTTCAACGGCCTTCTTCTTTATGGAAACACAACGTGTGTCCGCA---AAGTGGAAAACATCATTAGTGGTTTCGGGTCTCGTTACTTTAATTGCCGCGGTGCATTACTTTTATATGCGTGATGTTTGGGTG------------------------------GCAACA---------------------GGAGATACGCCAACGGTTTACCGGTATATCGACTGG------------------------CTGATCACAGTGCCGCTCTTGATGATTGAGTTTTACTTAATCCTGCGTGCG---------ATT---ACTAATATCTCGGGT---GGTGTT------------------------------------TTCTGGCGT---CTAACTGTTGGTTCGCTAATCATGCTCATAGGCGGTTATTTAGGTGAA---------GCA------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTGTGGCA---TTTGTCATCGGAATGGCTGGCTGGGCATACATCCTGTATGAAATT---------------TTT------GCA---GGTGAAGCAGGGCGTGTTGCTGCCGAT------GAG---GCTCCAGAGTCAGTT---AAA---TCC---GCT---TAC---TCA---ACAATG---CGTTGGATTGTGACTATT---------------------------------------------------------------GGTTGG---------GCAATTTATCCGTTAGGTTACTTCTTCGGATACATG---------------------------------------GCTGGTGGTGCCGACATGGCAACACTGAACATTATTTACAACCTTGCAGACGTACTTAACAAAATTGCGTTCGGAGTTATCATCTGGAATGTTGCTGTTACAGAG---TCTGAAGCAAAAGCA------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------MTMIKAMKFAITTGILSILPVAAMAAENLQSDDFVGISFWLISMALVASTAFFFMETQRVSA-KWKTSLVVSGLVTLIAAVHYFYMRDVWV----------AT-------GDTPTVYRYIDW--------LITVPLLMIEFYLILRA---I-TNISG-GV------------FWR-LTVGSLIMLIGGYLGE---A------G--Y-----------M----------------------NV------TVA-FVIGMAGWAYILYEI-----F--A-GEAGRVAAD--E-APESV-K-S-A-Y-S-TM-RWIVTI---------------------GW---AIYPLGYFFGYM-------------AGGADMATLNIIYNLADVLNKIAFGVIIWNVAVTE-SEAKA------------------------------------ [III-Alpha1-MEDPR66A3]_1105087831612 [III-Alpha1-MEDPR66A3] JCVI_ORF_1105087831612_GS014_Coastal_1m jcvi|1105087831612| 1105087831612 JCVI ORF 1105087831612 1105087831612 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/MEDPR66A3-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 MEDPR66A3-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 20-DEC-2003 Coastal/1m_depth/S_n.a/GS014/South_of_Charleston/SC/North_American_East_Coast Atlantic Ocean marine 32.506943 -79.263885 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATTTTTATACATGGTGTCTCCGGGGGTACAAGCTTTATCAAAATAAGGTTTGTGTTTAAAAAGGTAGGGCGTTCTAGAACGAAGTTTTTTGGGAGTGTCCTAATGACAATGATTAAAGCAATGAAATTTGCAATTACGACAGGTATTCTGTCAATTCTACCTGTAGCCGCGATGGCTGCAGACAACCTTCAAAGCGATGATTTTGTTGGAATCAGCTTCTGGCTGATATCAATGGCCTTAGTCGCTTCAACAGCTTTCTTCTTTATGGAAACACAACGTGTGTCCGCAAAGTGGAAAACATCATTAGTGGTTTCGGGTCTTGTTACTTTAATTGCCGCGGTGCATTACTTTTACATGCGTGATGTTTGGGTGGCAACAGGAGATACGCCAACGGTTTACCGATATATTGACTGGTTAATCACAGTGCCTCTATTGATGATTGAGTTTTACTTGATCCTGCGTGCGATTACTAATATCTCAGGCGGTGTCTTCTGGCGTCTAACTATCGGTTCGCTAATCATGCTCATAGGCGGTTATTTAGGTGAAGCAGGTTACATGAATGTAACTGTTGCATTCATAATCGGAATGGCTGGCTGGGCATACATCCTGTATGAAATTTTTGCAGGTGAAGCCGGACGTGTTGCTGCCGATGAGGCTCCAGAGTCAGTTAAATCTGCTTACTCAACAATGCGTTGGATTGTGACTATTGGTTGGGCAATCTATCCGTTAGGTTACTTCTTCGGATATATGGCCGGTGGTGCCGATATGGCAACATTGAACATTATTTACAACCTTGCAGACGTACTTAACAAAATTGCGTTCGGAGTTATCATCTGGAACGTTGCTGTTACAGAATCTGAAGCAAAAGCA IFIHGVSGGTSFIKIRFVFKKVGRSRTKFFGSVLMTMIKAMKFAITTGILSILPVAAMAADNLQSDDFVGISFWLISMALVASTAFFFMETQRVSAKWKTSLVVSGLVTLIAAVHYFYMRDVWVATGDTPTVYRYIDWLITVPLLMIEFYLILRAITNISGGVFWRLTIGSLIMLIGGYLGEAGYMNVTVAFIIGMAGWAYILYEIFAGEAGRVAADEAPESVKSAYSTMRWIVTIGWAIYPLGYFFGYMAGGADMATLNIIYNLADVLNKIAFGVIIWNVAVTESEAKA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTTATACATGGTGTCTCCGGGGGTACAAGCTTTATCAAAATAAGGTTTGTGTTTAAAAAGGTAGGGCGTTCTAGAACGAAGTTTTTTGGGAGTGTCCTAATGACAATGATTAAAGCAATGAAATTTGCAATTACGACAGGTATTCTGTCAATTCTACCTGTAGCCGCGATGGCTGCAGACAACCTTCAAAGCGATGATTTTGTTGGAATCAGCTTCTGGCTGATATCAATGGCCTTAGTCGCTTCAACAGCTTTCTTCTTTATGGAAACACAACGTGTGTCCGCA---AAGTGGAAAACATCATTAGTGGTTTCGGGTCTTGTTACTTTAATTGCCGCGGTGCATTACTTTTACATGCGTGATGTTTGGGTG------------------------------GCAACA---------------------GGAGATACGCCAACGGTTTACCGATATATTGACTGG------------------------TTAATCACAGTGCCTCTATTGATGATTGAGTTTTACTTGATCCTGCGTGCG---------ATT---ACTAATATCTCAGGC---GGTGTC------------------------------------TTCTGGCGT---CTAACTATCGGTTCGCTAATCATGCTCATAGGCGGTTATTTAGGTGAA---------GCA------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTGTTGCA---TTCATAATCGGAATGGCTGGCTGGGCATACATCCTGTATGAAATT---------------TTT------GCA---GGTGAAGCCGGACGTGTTGCTGCCGAT------GAG---GCTCCAGAGTCAGTT---AAA---TCT---GCT---TAC---TCA---ACAATG---CGTTGGATTGTGACTATT---------------------------------------------------------------GGTTGG---------GCAATCTATCCGTTAGGTTACTTCTTCGGATATATG---------------------------------------GCCGGTGGTGCCGATATGGCAACATTGAACATTATTTACAACCTTGCAGACGTACTTAACAAAATTGCGTTCGGAGTTATCATCTGGAACGTTGCTGTTACAGAA---TCTGAAGCAAAAGCA------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------IFIHGVSGGTSFIKIRFVFKKVGRSRTKFFGSVLMTMIKAMKFAITTGILSILPVAAMAADNLQSDDFVGISFWLISMALVASTAFFFMETQRVSA-KWKTSLVVSGLVTLIAAVHYFYMRDVWV----------AT-------GDTPTVYRYIDW--------LITVPLLMIEFYLILRA---I-TNISG-GV------------FWR-LTIGSLIMLIGGYLGE---A------G--Y-----------M----------------------NV------TVA-FIIGMAGWAYILYEI-----F--A-GEAGRVAAD--E-APESV-K-S-A-Y-S-TM-RWIVTI---------------------GW---AIYPLGYFFGYM-------------AGGADMATLNIIYNLADVLNKIAFGVIIWNVAVTE-SEAKA------------------------------------ [III-env9]_DQ203424 [III-env9] MedHO102H3_env_samples_DQ203424 gi|77547296|gb|DQ203424| Uncultured bacterium clone MedHO102H3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102H3 predicted proteorhodopsin gene, partial cds DQ203424 [[proteorhodopsin super-cluster III/env cluster 9]] proteorhodopsin super-cluster III env cluster 9 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTACATTGATTGGCTAATTACAGTTCCATTGTTAATGGTAGAATTTTACATTATCCTTAGAGCATGTACAGCGGTTGCTGGTGGTGTTTTCTGGAAACTAATGATTGGTTCTTTAGTAATGTTAATTGGTGGTTACTTAGGTGAAGCTGGTTACATGAACGTAACTCTTGGTTTTGTTATAGGAATGGTTGGTTGGATATACATCCTATATGAGGTATTTGCTGGTGAAGCAAGTAAAGCTAGCGAAGAAGCTCCAGAGTCAGTTAAGTCAGCTTTCTCTACAATGAGATGGATTGTAACAATTGGTTGGGCAATTTATCCA RYIDWLITVPLLMVEFYIILRACTAVAGGVFWKLMIGSLVMLIGGYLGEAGYMNVTLGFVIGMVGWIYILYEVFAGEASKASEEAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATTGATTGG------------------------CTAATTACAGTTCCATTGTTAATGGTAGAATTTTACATTATCCTTAGAGCA---------TGT---ACAGCGGTTGCTGGT---GGTGTT------------------------------------TTCTGGAAA---CTAATGATTGGTTCTTTAGTAATGTTAATTGGTGGTTACTTAGGTGAA---------GCT------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACGTA------------------ACTCTTGGT---TTTGTTATAGGAATGGTTGGTTGGATATACATCCTATATGAGGTA---------------TTT------GCT---GGTGAAGCAAGTAAAGCT---AGCGAA------GAA---GCTCCAGAGTCAGTT---AAG---TCA---GCT---TTC---TCT---ACAATG---AGATGGATTGTAACAATT---------------------------------------------------------------GGTTGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYIILRA---C-TAVAG-GV------------FWK-LMIGSLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TLG-FVIGMVGWIYILYEV-----F--A-GEASKA-SE--E-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-env9]_DQ203537 [III-env9] MedHO1202E1_env_samples_DQ203537 gi|77547522|gb|DQ203537| Uncultured bacterium clone MedHO1202E1 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202E1 predicted proteorhodopsin gene, partial cds DQ203537 [[proteorhodopsin super-cluster III/env cluster 9]] proteorhodopsin super-cluster III env cluster 9 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATAGACTGGCTAATTACAGTTCCATTGTTAATGGTAGAATTTTACATTATCCTTAGAGCATGTACAGCGGTTGCTGGTGGTGTTTTCTGGAAACTAATGATTGGTTCTTTAGTAATGTTAATTGGTGGTTACTTAGGTGAAGCTGGTTACATGAACGTAACTCTTGGTTTTGTTATAGGAATGGTTGGTTGGATATACATCCTATATGAGGTATTTGCTGGTGAAGCAAGTAAAGCTAGCGAAGAAGCTCCAGAGTCAGTTAAGTCAGCTTTCTCTACAATGAGATGGATTGTAACAATTGGTTGGGCAATTTATCCA SYIDWLITVPLLMVEFYIILRACTAVAGGVFWKLMIGSLVMLIGGYLGEAGYMNVTLGFVIGMVGWIYILYEVFAGEASKASEEAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATAGACTGG------------------------CTAATTACAGTTCCATTGTTAATGGTAGAATTTTACATTATCCTTAGAGCA---------TGT---ACAGCGGTTGCTGGT---GGTGTT------------------------------------TTCTGGAAA---CTAATGATTGGTTCTTTAGTAATGTTAATTGGTGGTTACTTAGGTGAA---------GCT------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACGTA------------------ACTCTTGGT---TTTGTTATAGGAATGGTTGGTTGGATATACATCCTATATGAGGTA---------------TTT------GCT---GGTGAAGCAAGTAAAGCT---AGCGAA------GAA---GCTCCAGAGTCAGTT---AAG---TCA---GCT---TTC---TCT---ACAATG---AGATGGATTGTAACAATT---------------------------------------------------------------GGTTGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMVEFYIILRA---C-TAVAG-GV------------FWK-LMIGSLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TLG-FVIGMVGWIYILYEV-----F--A-GEASKA-SE--E-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-env9]_DQ203341 [III-env9] medHO102_env_samples_DQ203341 gi|77547130|gb|DQ203341| Uncultured bacterium clone medHO102 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO102 predicted proteorhodopsin gene, partial cds DQ203341 [[proteorhodopsin super-cluster III/env cluster 9]] proteorhodopsin super-cluster III env cluster 9 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTAATTACAGTTCCATTGTTAATGGTAGAATTTTACATTATCCTTAGAGCATGTACAGCGGTTGCTGGTGGTGTTTTCTGGAAACTAATGATTGGTTCTTTAGTAATGTTAATTGGTGGTTACTTAGGTGAAGCTGGTTACATGAACGTAACTCTTGGTTTTGTTATAGGAATGGTTGGTTGGATATACATCCTATATGAGGTATTTGCTGGTGAAGCAAGTAAAGCTAGCGAAGAAGCTCCAGAGTCAGTGAAGTCAGCTTTCTCTACAATGAGATGGATTGTAACAATTGGGTGGGCCATTTATCCA RYIDWLITVPLLMVEFYIILRACTAVAGGVFWKLMIGSLVMLIGGYLGEAGYMNVTLGFVIGMVGWIYILYEVFAGEASKASEEAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACAGTTCCATTGTTAATGGTAGAATTTTACATTATCCTTAGAGCA---------TGT---ACAGCGGTTGCTGGT---GGTGTT------------------------------------TTCTGGAAA---CTAATGATTGGTTCTTTAGTAATGTTAATTGGTGGTTACTTAGGTGAA---------GCT------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACGTA------------------ACTCTTGGT---TTTGTTATAGGAATGGTTGGTTGGATATACATCCTATATGAGGTA---------------TTT------GCT---GGTGAAGCAAGTAAAGCT---AGCGAA------GAA---GCTCCAGAGTCAGTG---AAG---TCA---GCT---TTC---TCT---ACAATG---AGATGGATTGTAACAATT---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYIILRA---C-TAVAG-GV------------FWK-LMIGSLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TLG-FVIGMVGWIYILYEV-----F--A-GEASKA-SE--E-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-env9]_DQ203480 [III-env9] medHO10G2_env_samples_DQ203480 gi|77547408|gb|DQ203480| Uncultured bacterium clone medHO10G2 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10G2 predicted proteorhodopsin gene, partial cds DQ203480 [[proteorhodopsin super-cluster III/env cluster 9]] proteorhodopsin super-cluster III env cluster 9 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGATTGGCTAATTACAGTTCCATTGTTAATGGTAGAATTTTACATTATCCTTAGAGCATGTACAGCGGTTGCTGGTGGTGTTTTCTGGAAACTAATGATTGGTTCTTTAGTAATGTTAATTGGTGGTTACTTAGGTGAAGCTGGTTACATGAACGTAACTCTTGGTTTTGTTATAGGAATGGTTGGTTGGATATACATCCTATATGAGGTATTTGCTGGTGAAGCAAGTAAAGCTAGCGAAGAAGCTCCAGAGTCAGTTAAGTCAGCTTTCTCTACAATGAGATGGATTGTAACAATTGGGTGGGCAATTTATCCA SYIDWLITVPLLMVEFYIILRACTAVAGGVFWKLMIGSLVMLIGGYLGEAGYMNVTLGFVIGMVGWIYILYEVFAGEASKASEEAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGATTGG------------------------CTAATTACAGTTCCATTGTTAATGGTAGAATTTTACATTATCCTTAGAGCA---------TGT---ACAGCGGTTGCTGGT---GGTGTT------------------------------------TTCTGGAAA---CTAATGATTGGTTCTTTAGTAATGTTAATTGGTGGTTACTTAGGTGAA---------GCT------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACGTA------------------ACTCTTGGT---TTTGTTATAGGAATGGTTGGTTGGATATACATCCTATATGAGGTA---------------TTT------GCT---GGTGAAGCAAGTAAAGCT---AGCGAA------GAA---GCTCCAGAGTCAGTT---AAG---TCA---GCT---TTC---TCT---ACAATG---AGATGGATTGTAACAATT---------------------------------------------------------------GGGTGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMVEFYIILRA---C-TAVAG-GV------------FWK-LMIGSLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TLG-FVIGMVGWIYILYEV-----F--A-GEASKA-SE--E-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-env9]_DQ203431 [III-env9] medHO103_env_samples_DQ203431 gi|77547310|gb|DQ203431| Uncultured bacterium clone medHO103 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO103 predicted proteorhodopsin gene, partial cds DQ203431 [[proteorhodopsin super-cluster III/env cluster 9]] proteorhodopsin super-cluster III env cluster 9 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGACTGGCTAATTACAGTTCCATTATTAATGGTAGAATTTTACATTATCCTTAGAGCATGTACAGCGGTTGCTGGTGGTGTTTTCTGGAAACTAATGATTGGTTCTTTAGTAATGTTAATTGGTGGTTACTTAGGTGAAGCTGGTTACATGAACGTAACTCTTGGTTTTGTTATAGGAATGGTTGGTTGGATATACATCCTATATGAGGTATTTGCTGGTGAAGCAAGTAAAGCTAGCGAAGAAGCTCCAGAGTCAGTTAAGTCAGCTTTCTCTACAATGAGATGGATTGTAACAATTGGTTGGGCCATATATCCA SYIDWLITVPLLMVEFYIILRACTAVAGGVFWKLMIGSLVMLIGGYLGEAGYMNVTLGFVIGMVGWIYILYEVFAGEASKASEEAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGACTGG------------------------CTAATTACAGTTCCATTATTAATGGTAGAATTTTACATTATCCTTAGAGCA---------TGT---ACAGCGGTTGCTGGT---GGTGTT------------------------------------TTCTGGAAA---CTAATGATTGGTTCTTTAGTAATGTTAATTGGTGGTTACTTAGGTGAA---------GCT------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACGTA------------------ACTCTTGGT---TTTGTTATAGGAATGGTTGGTTGGATATACATCCTATATGAGGTA---------------TTT------GCT---GGTGAAGCAAGTAAAGCT---AGCGAA------GAA---GCTCCAGAGTCAGTT---AAG---TCA---GCT---TTC---TCT---ACAATG---AGATGGATTGTAACAATT---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMVEFYIILRA---C-TAVAG-GV------------FWK-LMIGSLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TLG-FVIGMVGWIYILYEV-----F--A-GEASKA-SE--E-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-env9]_DQ203391 [III-env9] MedHO102E3_env_samples_DQ203391 gi|77547230|gb|DQ203391| Uncultured bacterium clone MedHO102E3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102E3 predicted proteorhodopsin gene, partial cds DQ203391 [[proteorhodopsin super-cluster III/env cluster 9]] proteorhodopsin super-cluster III env cluster 9 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTAATTACAGTTCCATTGTTAATGGTAGAATTTTACATTATCCTTAGAGCATGTACAGCGGTTGCTGGTGGTGTTTTCTGGAAACTAATGATTGGTTCTTTAGTAATGTTAATTGGTGGTTACTTAGGTGAAGCTGGTTACATGAACGTAACTCTTGGTTTTGTTATAGGAATGGTTGGTTGGATATACATCCTATATGAGGTATTTGCTGGTGAAGCAAGTAAAGCTAGCGAAGAAGCTCCAGAGTCAGTTAAGTCAGCTTTCTCTACAATGAGATGGATTGTAACAATTGGTTGGGCCATTTATCCA RYIDWLITVPLLMVEFYIILRACTAVAGGVFWKLMIGSLVMLIGGYLGEAGYMNVTLGFVIGMVGWIYILYEVFAGEASKASEEAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACAGTTCCATTGTTAATGGTAGAATTTTACATTATCCTTAGAGCA---------TGT---ACAGCGGTTGCTGGT---GGTGTT------------------------------------TTCTGGAAA---CTAATGATTGGTTCTTTAGTAATGTTAATTGGTGGTTACTTAGGTGAA---------GCT------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACGTA------------------ACTCTTGGT---TTTGTTATAGGAATGGTTGGTTGGATATACATCCTATATGAGGTA---------------TTT------GCT---GGTGAAGCAAGTAAAGCT---AGCGAA------GAA---GCTCCAGAGTCAGTT---AAG---TCA---GCT---TTC---TCT---ACAATG---AGATGGATTGTAACAATT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYIILRA---C-TAVAG-GV------------FWK-LMIGSLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TLG-FVIGMVGWIYILYEV-----F--A-GEASKA-SE--E-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-env9]_DQ203444 [III-env9] medHO10B1_env_samples_DQ203444 gi|77547336|gb|DQ203444| Uncultured bacterium clone medHO10B1 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10B1 predicted proteorhodopsin gene, partial cds DQ203444 [[proteorhodopsin super-cluster III/env cluster 9]] proteorhodopsin super-cluster III env cluster 9 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGACTGGCTAATTACAGTTCCATTGTTAATGGTAGAATTTTACATTATCCTTAGAGCATGTACAGCGGTTGCTGGTGGTGTTTTCTGGAAACTAATGATTGGTTCTTTAGTAATGTTAATTGGTGGTTACTTAGGTGAAGCTGGTTACATGAACGTAACTCTTGGTTTTGTTATAGGAATGGTTGGTTGGATATACATCCTATATGAGGTATTTGCTGGTGAAGCAAGTAAAGCTAGCGAAGAAGCTCCAGAGTCAGTTAAGTCAGCTTTCTCTACAATGAGATGGATTGTAACAATTGGTTGGGCAATTTACCCA SYIDWLITVPLLMVEFYIILRACTAVAGGVFWKLMIGSLVMLIGGYLGEAGYMNVTLGFVIGMVGWIYILYEVFAGEASKASEEAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGACTGG------------------------CTAATTACAGTTCCATTGTTAATGGTAGAATTTTACATTATCCTTAGAGCA---------TGT---ACAGCGGTTGCTGGT---GGTGTT------------------------------------TTCTGGAAA---CTAATGATTGGTTCTTTAGTAATGTTAATTGGTGGTTACTTAGGTGAA---------GCT------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACGTA------------------ACTCTTGGT---TTTGTTATAGGAATGGTTGGTTGGATATACATCCTATATGAGGTA---------------TTT------GCT---GGTGAAGCAAGTAAAGCT---AGCGAA------GAA---GCTCCAGAGTCAGTT---AAG---TCA---GCT---TTC---TCT---ACAATG---AGATGGATTGTAACAATT---------------------------------------------------------------GGTTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMVEFYIILRA---C-TAVAG-GV------------FWK-LMIGSLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TLG-FVIGMVGWIYILYEV-----F--A-GEASKA-SE--E-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-env9]_DQ203365 [III-env9] MedHO102C12_env_samples_DQ203365 gi|77547178|gb|DQ203365| Uncultured bacterium clone MedHO102C12 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102C12 predicted proteorhodopsin gene, partial cds DQ203365 [[proteorhodopsin super-cluster III/env cluster 9]] proteorhodopsin super-cluster III env cluster 9 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGACTGGCTAATTACAGTTCCTTTGTTAATGGTAGAATTTTACATTATCCTTAGAGCATGTACAGCTGTTGCTGGTGGTGTTTTCTGGAAACTAATGATTGGTTCTTTAGTAATGTTAATTGGTGGTTACTTAGGTGAAGCTGGTTACATGAACGTAACTCTTGGTTTTGTTATAGGAATGGTTGGTTGGATATACATCCTATATGAGGTATTTGCTGGTGAAGCAAGTAAAGCTAGCGAAGAAGCTCCAGAGTCAGTTAAGTCAGCTTTCTCTACAATGAGATGGATTGTAACAATTGGTTGGGCAATATATCCA SYIDWLITVPLLMVEFYIILRACTAVAGGVFWKLMIGSLVMLIGGYLGEAGYMNVTLGFVIGMVGWIYILYEVFAGEASKASEEAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGACTGG------------------------CTAATTACAGTTCCTTTGTTAATGGTAGAATTTTACATTATCCTTAGAGCA---------TGT---ACAGCTGTTGCTGGT---GGTGTT------------------------------------TTCTGGAAA---CTAATGATTGGTTCTTTAGTAATGTTAATTGGTGGTTACTTAGGTGAA---------GCT------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACGTA------------------ACTCTTGGT---TTTGTTATAGGAATGGTTGGTTGGATATACATCCTATATGAGGTA---------------TTT------GCT---GGTGAAGCAAGTAAAGCT---AGCGAA------GAA---GCTCCAGAGTCAGTT---AAG---TCA---GCT---TTC---TCT---ACAATG---AGATGGATTGTAACAATT---------------------------------------------------------------GGTTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMVEFYIILRA---C-TAVAG-GV------------FWK-LMIGSLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TLG-FVIGMVGWIYILYEV-----F--A-GEASKA-SE--E-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-env9]_DQ203589 [III-env9] medHO120A5_env_samples_DQ203589 gi|77547626|gb|DQ203589| Uncultured bacterium clone medHO120A5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120A5 predicted proteorhodopsin gene, partial cds DQ203589 [[proteorhodopsin super-cluster III/env cluster 9]] proteorhodopsin super-cluster III env cluster 9 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGACTGGCTAATTACAGTTCCATTGTTAATGGTAGAATTTTACATTATCCTTAGAGCATGTACAGCGGTTGCTGGTGGTGTTTTCTGGAAACTAATGATTGGTTCTTTAGTAATGTTAATTGGTGGTTACTTAGGTGAAGCTGGTTACATGAACGTAACTCTTGGTTTTGTTATAGGAATGGTTGGTTGGATATACATCCTATATGAGGTATTTGCTGGTGAAGCAAGTAAAGCTAGCGAAGAAGCTCCAGAGTCAGTGAAGTCAGCTTTCTCTACAATGAGATGGATTGTAACAATTGGTTGGGCCATCTATCCA RYIDWLITVPLLMVEFYIILRACTAVAGGVFWKLMIGSLVMLIGGYLGEAGYMNVTLGFVIGMVGWIYILYEVFAGEASKASEEAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGACTGG------------------------CTAATTACAGTTCCATTGTTAATGGTAGAATTTTACATTATCCTTAGAGCA---------TGT---ACAGCGGTTGCTGGT---GGTGTT------------------------------------TTCTGGAAA---CTAATGATTGGTTCTTTAGTAATGTTAATTGGTGGTTACTTAGGTGAA---------GCT------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACGTA------------------ACTCTTGGT---TTTGTTATAGGAATGGTTGGTTGGATATACATCCTATATGAGGTA---------------TTT------GCT---GGTGAAGCAAGTAAAGCT---AGCGAA------GAA---GCTCCAGAGTCAGTG---AAG---TCA---GCT---TTC---TCT---ACAATG---AGATGGATTGTAACAATT---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYIILRA---C-TAVAG-GV------------FWK-LMIGSLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TLG-FVIGMVGWIYILYEV-----F--A-GEASKA-SE--E-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-env9]_DQ203357 [III-env9] MedHO102B4_env_samples_DQ203357 gi|77547162|gb|DQ203357| Uncultured bacterium clone MedHO102B4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102B4 predicted proteorhodopsin gene, partial cds DQ203357 [[proteorhodopsin super-cluster III/env cluster 9]] proteorhodopsin super-cluster III env cluster 9 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGATTGGCTAATTACAGTTCCATTGTTAATGGTAGAATTTTACATTATCCTTAGAGCGTGTACAGCGGTTGCTGGTGGTGTTTTCTGGAAACTAATGATTGGTTCTTTAGTGATGTTAATCGGTGGTTACTTAGGTGAAGCTGGTTACATGAACGTAACTCTTGGTTTTGTTATAGGAATGGTTGGTTGGATATACATCCTATATGAAGTATTTGCTGGTGAAGCAAGTAAAGCTAGCGAAGAAGCTCCAGAGTCAGTTAAATCAGCTTTCTCTACAATGAGATGGATTGTAACAATTGGTTGGGCAATCTATCCA SYIDWLITVPLLMVEFYIILRACTAVAGGVFWKLMIGSLVMLIGGYLGEAGYMNVTLGFVIGMVGWIYILYEVFAGEASKASEEAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGATTGG------------------------CTAATTACAGTTCCATTGTTAATGGTAGAATTTTACATTATCCTTAGAGCG---------TGT---ACAGCGGTTGCTGGT---GGTGTT------------------------------------TTCTGGAAA---CTAATGATTGGTTCTTTAGTGATGTTAATCGGTGGTTACTTAGGTGAA---------GCT------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACGTA------------------ACTCTTGGT---TTTGTTATAGGAATGGTTGGTTGGATATACATCCTATATGAAGTA---------------TTT------GCT---GGTGAAGCAAGTAAAGCT---AGCGAA------GAA---GCTCCAGAGTCAGTT---AAA---TCA---GCT---TTC---TCT---ACAATG---AGATGGATTGTAACAATT---------------------------------------------------------------GGTTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMVEFYIILRA---C-TAVAG-GV------------FWK-LMIGSLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TLG-FVIGMVGWIYILYEV-----F--A-GEASKA-SE--E-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-env9]_DQ203404 [III-env9] MedHO102F5_env_samples_DQ203404 gi|77547256|gb|DQ203404| Uncultured bacterium clone MedHO102F5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102F5 predicted proteorhodopsin gene, partial cds DQ203404 [[proteorhodopsin super-cluster III/env cluster 9]] proteorhodopsin super-cluster III env cluster 9 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTATATTGACTGGCTAATTACAGTTCCATTGTTAATGGTAGAATTTTACATTATCCTTAGAGCATGTACAGCGGTTGCCGGTGGTGTTTTCTGGAAACTAATGATTGGTTCTTTAGTAATGTTAATCGGTGGTTACTTAGGTGAAGCTGGTTACATGAACGTAACTCTTGGTTTTGTTATAGGAATGGTTGGTTGGATATACATCCTATATGAAGTATTTGCTGGTGAAGCAAGTAAAGCTAGCGAAGAAGCTCCAGAGTCAGTTAAGTCAGCTTTCTCTACAATGAGATGGATTGTAACAATTGGTTGGGCCATCTATCCA RYIDWLITVPLLMVEFYIILRACTAVAGGVFWKLMIGSLVMLIGGYLGEAGYMNVTLGFVIGMVGWIYILYEVFAGEASKASEEAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTATATTGACTGG------------------------CTAATTACAGTTCCATTGTTAATGGTAGAATTTTACATTATCCTTAGAGCA---------TGT---ACAGCGGTTGCCGGT---GGTGTT------------------------------------TTCTGGAAA---CTAATGATTGGTTCTTTAGTAATGTTAATCGGTGGTTACTTAGGTGAA---------GCT------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACGTA------------------ACTCTTGGT---TTTGTTATAGGAATGGTTGGTTGGATATACATCCTATATGAAGTA---------------TTT------GCT---GGTGAAGCAAGTAAAGCT---AGCGAA------GAA---GCTCCAGAGTCAGTT---AAG---TCA---GCT---TTC---TCT---ACAATG---AGATGGATTGTAACAATT---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYIILRA---C-TAVAG-GV------------FWK-LMIGSLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TLG-FVIGMVGWIYILYEV-----F--A-GEASKA-SE--E-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-env9]_DQ203485 [III-env9] medHO10G8_env_samples_DQ203485 gi|77547418|gb|DQ203485| Uncultured bacterium clone medHO10G8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10G8 predicted proteorhodopsin gene, partial cds DQ203485 [[proteorhodopsin super-cluster III/env cluster 9]] proteorhodopsin super-cluster III env cluster 9 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGACTGGCTAATTACAGTTCCATTGTTAATGGTAGAATTTTACATTATCCTTAGAGCATGTACAGCGGTTGCTGGTGGTGTTTTCTGGAAACTAATGATTGGTTCTTTAGTAATGTTAATCGGTGGTTACTTAGGTGAAGCTGGTTACATGAACGTAACTCTTGGTTTTGTTATAGGAATGGTTGGTTGGATATACATCCTATATGAAGTATTTGCTGGTGAAGCAAGTAAAGCTAGCGAAGAAGCTCCAGAGTCAGTTAAGTCAGCTTTCTCTACAATGAGATGGATTGTAACAATTGGTTGGGCCATCTATCCA SYIDWLITVPLLMVEFYIILRACTAVAGGVFWKLMIGSLVMLIGGYLGEAGYMNVTLGFVIGMVGWIYILYEVFAGEASKASEEAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGACTGG------------------------CTAATTACAGTTCCATTGTTAATGGTAGAATTTTACATTATCCTTAGAGCA---------TGT---ACAGCGGTTGCTGGT---GGTGTT------------------------------------TTCTGGAAA---CTAATGATTGGTTCTTTAGTAATGTTAATCGGTGGTTACTTAGGTGAA---------GCT------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACGTA------------------ACTCTTGGT---TTTGTTATAGGAATGGTTGGTTGGATATACATCCTATATGAAGTA---------------TTT------GCT---GGTGAAGCAAGTAAAGCT---AGCGAA------GAA---GCTCCAGAGTCAGTT---AAG---TCA---GCT---TTC---TCT---ACAATG---AGATGGATTGTAACAATT---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLLMVEFYIILRA---C-TAVAG-GV------------FWK-LMIGSLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TLG-FVIGMVGWIYILYEV-----F--A-GEASKA-SE--E-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-env9]_DQ203360 [III-env9] MedHO102B7_env_samples_DQ203360 gi|77547168|gb|DQ203360| Uncultured bacterium clone MedHO102B7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102B7 predicted proteorhodopsin gene, partial cds DQ203360 [[proteorhodopsin super-cluster III/env cluster 9]] proteorhodopsin super-cluster III env cluster 9 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGACTGGCTAATTACAGTTCCATTGTTGATGGTAGAATTTTACATTATCCTTAGAGCATGTACAGCGGTTGCTGGTGGTGTTTTCTGGAAACTAATGATTGGTTCTTTAGTAATGTTAATCGGTGGTTACTTAGGTGAAGCTGGTTACATGAACGTAACTCTTGGTTTTGTAATAGGAATGGTTGGTTGGATATACATCCTATATGAAGTATTTGCTGGTGAAGCAAGTAAAGCTAGCGAAGAAGCTCCAGAGTCAGTTAAGTCAGCTTTCTCTACAATGAGATGGATTGTAACAATTGGGTGGGCCATCTACCCA RYIDWLITVPLLMVEFYIILRACTAVAGGVFWKLMIGSLVMLIGGYLGEAGYMNVTLGFVIGMVGWIYILYEVFAGEASKASEEAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGACTGG------------------------CTAATTACAGTTCCATTGTTGATGGTAGAATTTTACATTATCCTTAGAGCA---------TGT---ACAGCGGTTGCTGGT---GGTGTT------------------------------------TTCTGGAAA---CTAATGATTGGTTCTTTAGTAATGTTAATCGGTGGTTACTTAGGTGAA---------GCT------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACGTA------------------ACTCTTGGT---TTTGTAATAGGAATGGTTGGTTGGATATACATCCTATATGAAGTA---------------TTT------GCT---GGTGAAGCAAGTAAAGCT---AGCGAA------GAA---GCTCCAGAGTCAGTT---AAG---TCA---GCT---TTC---TCT---ACAATG---AGATGGATTGTAACAATT---------------------------------------------------------------GGGTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYIILRA---C-TAVAG-GV------------FWK-LMIGSLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TLG-FVIGMVGWIYILYEV-----F--A-GEASKA-SE--E-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-env9]_DQ422180 [III-env9] clone_med-0m-c5_DQ422180 gi|90023880|gb|DQ422180| Uncultured bacterium clone med-0m-c5 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-c5 putative proteorhodopsin gene, partial cds. DQ422180 [[proteorhodopsin super-cluster III/env cluster 9]] proteorhodopsin super-cluster III env cluster 9 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTAATTACAGTTCCATTGTTAATGGTAGAATTTTACATTATCCTTAGAGCATGTACAGCGGTTGCTGGTGGTGTTTTCTGGAAACTAATGATTGGTTCTTTAGTAATGTTAGTCGGTGGTTACTTAGGTGAAGCTGGTTACATGAACGTAACTCTTGGTTTTGTTATAGGAATGGTTGGTTGGATATACATCCTATATGAAGTATTTGCTGGTGAAGCAAGTAAAGCTAGCGAAGAAGCTCCAGAGTCAGTTAAATCAGCTTTCTCTACAATGAGATGGATTGTAACAATTGGTTGGGCTATTTATCCA RYIDWLITVPLLMVEFYIILRACTAVAGGVFWKLMIGSLVMLVGGYLGEAGYMNVTLGFVIGMVGWIYILYEVFAGEASKASEEAPESVKSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACAGTTCCATTGTTAATGGTAGAATTTTACATTATCCTTAGAGCA---------TGT---ACAGCGGTTGCTGGT---GGTGTT------------------------------------TTCTGGAAA---CTAATGATTGGTTCTTTAGTAATGTTAGTCGGTGGTTACTTAGGTGAA---------GCT------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACGTA------------------ACTCTTGGT---TTTGTTATAGGAATGGTTGGTTGGATATACATCCTATATGAAGTA---------------TTT------GCT---GGTGAAGCAAGTAAAGCT---AGCGAA------GAA---GCTCCAGAGTCAGTT---AAA---TCA---GCT---TTC---TCT---ACAATG---AGATGGATTGTAACAATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMVEFYIILRA---C-TAVAG-GV------------FWK-LMIGSLVMLVGGYLGE---A------G--Y-----------M----------------------NV------TLG-FVIGMVGWIYILYEV-----F--A-GEASKA-SE--E-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-env9]_1105085192700 [III-env9] JCVI_ORF_1105085192700_GS028_Coastal_2m jcvi|1105085192700| 1105085192700 JCVI ORF 1105085192700 1105085192700 [[proteorhodopsin super-cluster III/env cluster 9]] proteorhodopsin super-cluster III env cluster 9 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 04-FEB-2004 Coastal/2m_depth/S_n.a/GS028/Coastal_Floreana/Galapagos_Islands Pacific Ocean marine -1.2169445 -90.319725 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf AACGGGACTGGCTATGCAGCAGATAGTGCTAATTTAAAGTCAGATGATTTTGTAGGAATTAGTTTCTGGTTAATTTCAATGGCTCTTGTAGCCTCAACTGCTTTCTTCTTTATGGAAACACAAAGAGTTTCTCCAAAGTGGAAAACTTCTTTAACAGTTTCTGGTCTAGTAACTCTAGTTGCTGCAGTTCACTATTTTTACATGAGAGATGTATGGGTAGGTACTGGAGAGACACCAACTGTTTACAGATATATTGACTGGCTAATTACAGTCCCATTGTTAATGGTAGAATTTTACATAATTCTAAGAGCATGTACCGCAGTCGCTGGTGGTGTTTTTTGGAAACTAATGATTGGTTCTTTAGTAATGTTAGTCGGTGGATACTTAGGTGAAGCTGGATACATGAACGTTACGCTTGGATTCGTTATAGGAATGGTTGGTTGGATATACATCCTATATGAAGTATTTGCTGGTGAAGCAAGTAAAGCTAGTGAAGAAGCTCCAGAGTCAGTTAAGTCAGCTTTCTCTACAATGAGATGGATTGTAACAATTGGTTGGGCAATTTACCCGATCGGTTACTTTATGGGTTATATGGCCGGTGGAGTGGATGATAATTCACTTAACATTATATATAACTTAGCTGATGTTCTAAATAAGATTGCATTTGGTGTAATTATTTGGAACGTTGCTGTAACAGAATCAGAAGCAGCA NGTGYAADSANLKSDDFVGISFWLISMALVASTAFFFMETQRVSPKWKTSLTVSGLVTLVAAVHYFYMRDVWVGTGETPTVYRYIDWLITVPLLMVEFYIILRACTAVAGGVFWKLMIGSLVMLVGGYLGEAGYMNVTLGFVIGMVGWIYILYEVFAGEASKASEEAPESVKSAFSTMRWIVTIGWAIYPIGYFMGYMAGGVDDNSLNIIYNLADVLNKIAFGVIIWNVAVTESEAA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACGGGACTGGCTATGCAGCAGATAGTGCTAATTTAAAGTCAGATGATTTTGTAGGAATTAGTTTCTGGTTAATTTCAATGGCTCTTGTAGCCTCAACTGCTTTCTTCTTTATGGAAACACAAAGAGTTTCTCCA---AAGTGGAAAACTTCTTTAACAGTTTCTGGTCTAGTAACTCTAGTTGCTGCAGTTCACTATTTTTACATGAGAGATGTATGGGTA------------------------------GGTACT---------------------GGAGAGACACCAACTGTTTACAGATATATTGACTGG------------------------CTAATTACAGTCCCATTGTTAATGGTAGAATTTTACATAATTCTAAGAGCA---------TGT---ACCGCAGTCGCTGGT---GGTGTT------------------------------------TTTTGGAAA---CTAATGATTGGTTCTTTAGTAATGTTAGTCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------AACGTT------------------ACGCTTGGA---TTCGTTATAGGAATGGTTGGTTGGATATACATCCTATATGAAGTA---------------TTT------GCT---GGTGAAGCAAGTAAAGCT---AGTGAA------GAA---GCTCCAGAGTCAGTT---AAG---TCA---GCT---TTC---TCT---ACAATG---AGATGGATTGTAACAATT---------------------------------------------------------------GGTTGG---------GCAATTTACCCGATCGGTTACTTTATGGGTTATATG---------------------------------------GCCGGTGGAGTGGATGATAATTCACTTAACATTATATATAACTTAGCTGATGTTCTAAATAAGATTGCATTTGGTGTAATTATTTGGAACGTTGCTGTAACAGAA---TCAGAAGCAGCA--------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------NGTGYAADSANLKSDDFVGISFWLISMALVASTAFFFMETQRVSP-KWKTSLTVSGLVTLVAAVHYFYMRDVWV----------GT-------GETPTVYRYIDW--------LITVPLLMVEFYIILRA---C-TAVAG-GV------------FWK-LMIGSLVMLVGGYLGE---A------G--Y-----------M----------------------NV------TLG-FVIGMVGWIYILYEV-----F--A-GEASKA-SE--E-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYPIGYFMGYM-------------AGGVDDNSLNIIYNLADVLNKIAFGVIIWNVAVTE-SEAA------------------------------------- [III-env9]_FJ560860 [III-env9] HEL150_env_samples_FJ560860 gi|223868867|gb|FJ560860| Uncultured microorganism clone HEL150 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL150 putative proteorhodopsin gene, partial cds FJ560860 [[proteorhodopsin super-cluster III/env cluster 9]] proteorhodopsin super-cluster III env cluster 9 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACCGTTCCATTATTAATGGTAGAATTTTACATAATTCTTAGAGCATGTACAGCTGTTGCTGGTGGTGTTTTCTGGAAATTAATGATTGGTTCATTGGTTATGCTTGTCGGTGGATATTTAGGTGAAGCTGGATACGTGAACGTAACACTAGGTTTTGTTATAGGAATGGTTGGTTGGATATACATTCTATATGAAGTTTTTGCTGGTGAAGCAAGCAAAGCTAGTGAAGAAGCTCCAGAGTCAGTTAGATCAGCTTTCTCTACAATGAGATGG TVPLLMVEFYIILRACTAVAGGVFWKLMIGSLVMLVGGYLGEAGYVNVTLGFVIGMVGWIYILYEVFAGEASKASEEAPESVRSAFSTMRW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCGTTCCATTATTAATGGTAGAATTTTACATAATTCTTAGAGCA---------TGT---ACAGCTGTTGCTGGT---GGTGTT------------------------------------TTCTGGAAA---TTAATGATTGGTTCATTGGTTATGCTTGTCGGTGGATATTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------GTG------------------------------------------------------------------AACGTA------------------ACACTAGGT---TTTGTTATAGGAATGGTTGGTTGGATATACATTCTATATGAAGTT---------------TTT------GCT---GGTGAAGCAAGCAAAGCT---AGTGAA------GAA---GCTCCAGAGTCAGTT---AGA---TCA---GCT---TTC---TCT---ACAATG---AGATGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMVEFYIILRA---C-TAVAG-GV------------FWK-LMIGSLVMLVGGYLGE---A------G--Y-----------V----------------------NV------TLG-FVIGMVGWIYILYEV-----F--A-GEASKA-SE--E-APESV-R-S-A-F-S-TM-RW------------------------------------------------------------------------------------------------------------------------------------ [III-env9]_DQ903162 [III-env9] clone_HB10038_DQ903162 gi|116294053|gb|DQ903162| Uncultured bacterium clone HB10038 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone HB10038 putative proteorhodopsin gene, partial cds. DQ903162 [[proteorhodopsin super-cluster III/env cluster 9]] proteorhodopsin super-cluster III env cluster 9 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na East China Sea surface water (ECS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na ATGGTAGCCGCTACTGTCTTCTTCTTTATGGAAACACAAAGAGTTTCTGCAAAGTGGAAAACATCACTAACAGTTTCTGGTCTTGTGACTTTAGTTGCTGCTGTACACTATTTTTATATGAGAGATGTGTGGGTAGGAACTGGTGAAACACCTACAGTTTATAGATATATTGACTGGTTAATTACTGTTCCATTGTTAATGGTAGAATTTTACATAATCCTTAGAGCATGTACAGCTGTTGCTGGTGGTGTTCTCTGGAAATTAATGATTGGTTCATTGGTTATGCTTGTCGGTGGATACTTAGGTGAAGCTGGATACATGAACGTAACTCTAGGTTTTGTTATAGGAATGGTTGGTTGGATATACATCCTATATGAAGTTTTTGCTGGTGAAGCAAGCAAAGCTAGTGAAGAAGCTCCAGAGTCAGTTAGATCAGCTTTCTCTACTATGAGATGGATTGTTACAATTGGTTGGGCCATTTACCCA MVAATVFFFMETQRVSAKWKTSLTVSGLVTLVAAVHYFYMRDVWVGTGETPTVYRYIDWLITVPLLMVEFYIILRACTAVAGGVLWKLMIGSLVMLVGGYLGEAGYMNVTLGFVIGMVGWIYILYEVFAGEASKASEEAPESVRSAFSTMRWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTCTTCTTCTTTATGGAAACACAAAGAGTTTCTGCA---AAGTGGAAAACATCACTAACAGTTTCTGGTCTTGTGACTTTAGTTGCTGCTGTACACTATTTTTATATGAGAGATGTGTGGGTA------------------------------GGAACT---------------------GGTGAAACACCTACAGTTTATAGATATATTGACTGG------------------------TTAATTACTGTTCCATTGTTAATGGTAGAATTTTACATAATCCTTAGAGCA---------TGT---ACAGCTGTTGCTGGT---GGTGTT------------------------------------CTCTGGAAA---TTAATGATTGGTTCATTGGTTATGCTTGTCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------AACGTA------------------ACTCTAGGT---TTTGTTATAGGAATGGTTGGTTGGATATACATCCTATATGAAGTT---------------TTT------GCT---GGTGAAGCAAGCAAAGCT---AGTGAA------GAA---GCTCCAGAGTCAGTT---AGA---TCA---GCT---TTC---TCT---ACTATG---AGATGGATTGTTACAATT---------------------------------------------------------------GGTTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMETQRVSA-KWKTSLTVSGLVTLVAAVHYFYMRDVWV----------GT-------GETPTVYRYIDW--------LITVPLLMVEFYIILRA---C-TAVAG-GV------------LWK-LMIGSLVMLVGGYLGE---A------G--Y-----------M----------------------NV------TLG-FVIGMVGWIYILYEV-----F--A-GEASKA-SE--E-APESV-R-S-A-F-S-TM-RWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [III-env9]_JX863323 [III-env9] MALINA_OTU50_262_L_env_samples_JX863323 gi|425477596|gb|JX863323| Uncultured bacterium clone MALINA OTU50 262 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU50 262 L putative proteorhodopsin mRNA, partial cds JX863323 [[proteorhodopsin super-cluster III/env cluster 9]] proteorhodopsin super-cluster III env cluster 9 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 11Aug2009 3m_depth Arctic Ocean marine 70.68 -139.62 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATCACAGTTCCATTATTAATGATTGAATTTCATATCATTTTAAGAGCATGCACTAAGGTTTCTGGTGGAGTTTTCTGGAAACTAATGATTGGTTCTTTAGTAATGTTGGTAGGTGGATATCTTGGAGAAGCAGGATACATCAACACAACATTAGGTTTTGTAATCGGAATGGTTGGTTGGATCTATATCTTATATGAAATCTTTGCTGGTGAAGCAAGTAAAGCTAGTGAAGGAGCTCCAGAATCAGTTCGTTCAGCATTTAGTACAATGCGATGGATTGTAACAATT WLITVPLLMIEFHIILRACTKVSGGVFWKLMIGSLVMLVGGYLGEAGYINTTLGFVIGMVGWIYILYEIFAGEASKASEGAPESVRSAFSTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATCACAGTTCCATTATTAATGATTGAATTTCATATCATTTTAAGAGCA---------TGC---ACTAAGGTTTCTGGT---GGAGTT------------------------------------TTCTGGAAA---CTAATGATTGGTTCTTTAGTAATGTTGGTAGGTGGATATCTTGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACA------------------ACATTAGGT---TTTGTAATCGGAATGGTTGGTTGGATCTATATCTTATATGAAATC---------------TTT------GCT---GGTGAAGCAAGTAAAGCT---AGTGAA------GGA---GCTCCAGAATCAGTT---CGT---TCA---GCA---TTT---AGT---ACAATG---CGATGGATTGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFHIILRA---C-TKVSG-GV------------FWK-LMIGSLVMLVGGYLGE---A------G--Y-----------I----------------------NT------TLG-FVIGMVGWIYILYEI-----F--A-GEASKA-SE--G-APESV-R-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-env9]_JX863324 [III-env9] MALINA_OTU50_266_L_env_samples_JX863324 gi|425477598|gb|JX863324| Uncultured bacterium clone MALINA OTU50 266 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU50 266 L putative proteorhodopsin mRNA, partial cds JX863324 [[proteorhodopsin super-cluster III/env cluster 9]] proteorhodopsin super-cluster III env cluster 9 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 11Aug2009 3m_depth Arctic Ocean marine 70.68 -139.62 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTAATCACAGTTCCATTATTAATGATTGAATTTTATATCATTTTAAGAGCATGCACTAAGGTTTCTGGTGGAGTTTTCTGGAAACTAATGATTGGTTCTTTAGTAATGTTGGTAGGTGGATATCTTGGAGAAGCAGGATACATCAACACAACATTAGGTTTTGTAATCGGAATGGTTGGTTGGATCTATATCTTACATGAAATCTTTGCTGGTGAAGCAAGTAAAGCTAGTGAAGAAGCTCCAGAATCAGTTCGTTCAGCATTTAGTACAATGCGATGGATTGTAACAATT WLITVPLLMIEFYIILRACTKVSGGVFWKLMIGSLVMLVGGYLGEAGYINTTLGFVIGMVGWIYILHEIFAGEASKASEEAPESVRSAFSTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATCACAGTTCCATTATTAATGATTGAATTTTATATCATTTTAAGAGCA---------TGC---ACTAAGGTTTCTGGT---GGAGTT------------------------------------TTCTGGAAA---CTAATGATTGGTTCTTTAGTAATGTTGGTAGGTGGATATCTTGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACA------------------ACATTAGGT---TTTGTAATCGGAATGGTTGGTTGGATCTATATCTTACATGAAATC---------------TTT------GCT---GGTGAAGCAAGTAAAGCT---AGTGAA------GAA---GCTCCAGAATCAGTT---CGT---TCA---GCA---TTT---AGT---ACAATG---CGATGGATTGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFYIILRA---C-TKVSG-GV------------FWK-LMIGSLVMLVGGYLGE---A------G--Y-----------I----------------------NT------TLG-FVIGMVGWIYILHEI-----F--A-GEASKA-SE--E-APESV-R-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-env9]_JX863329 [III-env9] MALINA_OTU54_318_L_env_samples_JX863329 gi|425477608|gb|JX863329| Uncultured bacterium clone MALINA OTU54 318 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU54 318 L putative proteorhodopsin mRNA, partial cds JX863329 [[proteorhodopsin super-cluster III/env cluster 9]] proteorhodopsin super-cluster III env cluster 9 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 02Aug2009 40m_depth Arctic Ocean marine 69.61 -138.23 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGATTACTGTACCACTTCTCATGGTTGAGTTTTACTTAATACTTCGTGCGATTGGTCAAGCATCAGCGGGCATATTCTGGCGTTTAATGATAGGCACTTTAGTAATGCTTGTCGGAGGTTATGCCGGTGAAGTTGGTTATATAGATGTTTGGCCTGCATTTATTATTGGAATGGCTGGTTGGGCATTCATTCTTTATGAAATCTTTCTTGGTGAAGCTGGTAAAATGTCTGCCAATCATGCCCCAGAATCTGTTAAATCTGCATTCTCTACAATGCGATGGATTGTGACTATT WLITVPLLMVEFYLILRAIGQASAGIFWRLMIGTLVMLVGGYAGEVGYIDVWPAFIIGMAGWAFILYEIFLGEAGKMSANHAPESVKSAFSTMRWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGATTACTGTACCACTTCTCATGGTTGAGTTTTACTTAATACTTCGTGCG---------ATT---GGTCAAGCATCAGCG---GGCATA------------------------------------TTCTGGCGT---TTAATGATAGGCACTTTAGTAATGCTTGTCGGAGGTTATGCCGGTGAA---------GTT------------------GGT------TAT---------------------------------ATA------------------------------------------------------------------GATGTT------------------TGGCCTGCA---TTTATTATTGGAATGGCTGGTTGGGCATTCATTCTTTATGAAATC---------------TTT------CTT---GGTGAAGCTGGTAAAATGTCTGCCAAT------CAT---GCCCCAGAATCTGTT---AAA---TCT---GCA---TTC---TCT---ACAATG---CGATGGATTGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMVEFYLILRA---I-GQASA-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------DV------WPA-FIIGMAGWAFILYEI-----F--L-GEAGKMSAN--H-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-env9]_FJ862950 [III-env9] clone_04_FJ862950 gi|226897300|gb|FJ862950| Uncultured bacterium clone 04 putative proteorhodopsin mRNA, partial cds. Uncultured bacterium clone 04 putative proteorhodopsin mRNA, partial cds. FJ862950 [[proteorhodopsin super-cluster III/env cluster 9]] proteorhodopsin super-cluster III env cluster 9 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 07-DEC-2009 #na coastal seawater Atlantic Ocean marine 38.8489 -75.1076 Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na ATTGACTGGTTAATTACTGTACCACTTCTCATGGTTGAGTTTTACTTAATTCTTCGTGCTATTGGTCAAGCATCAGCGGGCATATTCTGGCGTTTAATGATAGGTACTTTAGTAATGCTAGTCGGAGGTTATGCTGGTGAAGTTGGTTATATAGATGTTTGGCCTGCATTTATTATTGGAATGGCTGGTTGGATATTCATTCTTTATGAAATCTTTGCTGGCGAAGCTGGTAAAATGTCTGCCAATCATGCCCCAGAATCTGTTAAATCTGCATTCTCTACAATGCGGTGGATTGTGACTATTGGTTGGGCCATCTATGCTCGA IDWLITVPLLMVEFYLILRAIGQASAGIFWRLMIGTLVMLVGGYAGEVGYIDVWPAFIIGMAGWIFILYEIFAGEAGKMSANHAPESVKSAFSTMRWIVTIGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGACTGG------------------------TTAATTACTGTACCACTTCTCATGGTTGAGTTTTACTTAATTCTTCGTGCT---------ATT---GGTCAAGCATCAGCG---GGCATA------------------------------------TTCTGGCGT---TTAATGATAGGTACTTTAGTAATGCTAGTCGGAGGTTATGCTGGTGAA---------GTT------------------GGT------TAT---------------------------------ATA------------------------------------------------------------------GATGTT------------------TGGCCTGCA---TTTATTATTGGAATGGCTGGTTGGATATTCATTCTTTATGAAATC---------------TTT------GCT---GGCGAAGCTGGTAAAATGTCTGCCAAT------CAT---GCCCCAGAATCTGTT---AAA---TCT---GCA---TTC---TCT---ACAATG---CGGTGGATTGTGACTATT---------------------------------------------------------------GGTTGG---------GCCATCTATGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDW--------LITVPLLMVEFYLILRA---I-GQASA-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------DV------WPA-FIIGMAGWIFILYEI-----F--A-GEAGKMSAN--H-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [III-env9]_FJ862953 [III-env9] clone_09_FJ862953 gi|226897306|gb|FJ862953| Uncultured bacterium clone 09 putative proteorhodopsin mRNA, partial cds. Uncultured bacterium clone 09 putative proteorhodopsin mRNA, partial cds. FJ862953 [[proteorhodopsin super-cluster III/env cluster 9]] proteorhodopsin super-cluster III env cluster 9 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 07-DEC-2009 #na coastal seawater Atlantic Ocean marine 38.8489 -75.1076 Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na ATTGACTGGTTAATTACTGTACCACTTCTCATGGTTGAGTTTTACTTAATTCTTCGTGCTATTGGTCAAGCATCAGCGGGCATATTCTGGCGTTTAATGATAGGTACTTTAGTAATGCTAGTCGGAGGTTATGCTGGTGAAGTTGGTTATATAGATGTTTGGCCTGCATTTATTATTGGAATGGCTGGTTGGATATTCATTCTTTATGAAATCTTTGCTGGCGAAGCTGGTAAAATGTCTGCCAATCATGCCCCAGAATCTGTTAAATCTGCATTCTCTACAATGCGGTGGATTGTGACTATTGGTTGGGCCATCTATGCTCGA IDWLITVPLLMVEFYLILRAIGQASAGIFWRLMIGTLVMLVGGYAGEVGYIDVWPAFIIGMAGWIFILYEIFAGEAGKMSANHAPESVKSAFSTMRWIVTIGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGACTGG------------------------TTAATTACTGTACCACTTCTCATGGTTGAGTTTTACTTAATTCTTCGTGCT---------ATT---GGTCAAGCATCAGCG---GGCATA------------------------------------TTCTGGCGT---TTAATGATAGGTACTTTAGTAATGCTAGTCGGAGGTTATGCTGGTGAA---------GTT------------------GGT------TAT---------------------------------ATA------------------------------------------------------------------GATGTT------------------TGGCCTGCA---TTTATTATTGGAATGGCTGGTTGGATATTCATTCTTTATGAAATC---------------TTT------GCT---GGCGAAGCTGGTAAAATGTCTGCCAAT------CAT---GCCCCAGAATCTGTT---AAA---TCT---GCA---TTC---TCT---ACAATG---CGGTGGATTGTGACTATT---------------------------------------------------------------GGTTGG---------GCCATCTATGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDW--------LITVPLLMVEFYLILRA---I-GQASA-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------DV------WPA-FIIGMAGWIFILYEI-----F--A-GEAGKMSAN--H-APESV-K-S-A-F-S-TM-RWIVTI---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [III-env9]_1105158551180 [III-env9] JCVI_ORF_1105158551180_GS008_Coastal_1m jcvi|1105158551180| 1105158551180 JCVI ORF 1105158551180 1105158551180 [[proteorhodopsin super-cluster III/env cluster 9]] proteorhodopsin super-cluster III env cluster 9 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 16-nov-03 Coastal/1m_depth/S_26.5_psu/GS008/Newport_Harbor/RI/North_American_East_Coast Atlantic Ocean marine 41.485832 -71.35111 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATTTACGTTATAAAAAGTGTGCAATTATTTTTAATGGAGTTAAAAAACATGAAAGTAGTTTCAAGCAAATCTCTGACGGGGCTGGTAACAGCTGCGTTGGTTGCCTTCCCAACTATTGCTTCTGCAGCAGGTCACAGTAGTGCTCTAAAAGCTGACGATTTTGTTGGTATTTCATTTTGGTTTATTTCAATGGCGTTGATAGCTGCAACGGCATTTTTCTTTCTTGAGACACAACGTGTTTCAGCAAAATGGAAAACCTCACTAACAGTATCAGGTTTGGTAACTTTAGTGGCTGCTGTTCACTATTTCTACATGCGTGATATTTGGGTTTCAACAGGAGAGTCACCAACAGTCTTCCGTTACATTGATTGGCTAATTACTGTTCCACTTCTCATGGTTGAATTTTACATAATTCTTCGTGCAGCTGGGGCAGCTTCAGCCAGTATCTTCTGGAAGTTGATGATTGGTACTTTGGTAATGTTGGGTGGCGGTTACGCAGGTGAAGCTGGATATATTGCAGTTTTGCCGGCTTTCATTATTGGAATGGCGGGCTGGCTTTACATTCTATATGAAATCTTTGCTGGTGAAGCAGGGAAGGCGTCTGCAGAACAATCTTCTGCAGCTGTGAAGTCCGCTTTTGAAACAATGCGTTGGATTGTAACTATTGGCTGGGCTATTTACCCACTTGGATATTTTATGGGGTACTTGGCAGGCGGTGTAGATGCAGCCTCATTAAATGTAATCTACAACCTCGCTGACGTGTTAAATAAAATTGCGTTTGGCGTAATCATTTGGAATGTTGCAGTCACAGAAAGTGAATCCGCAAGC IYVIKSVQLFLMELKNMKVVSSKSLTGLVTAALVAFPTIASAAGHSSALKADDFVGISFWFISMALIAATAFFFLETQRVSAKWKTSLTVSGLVTLVAAVHYFYMRDIWVSTGESPTVFRYIDWLITVPLLMVEFYIILRAAGAASASIFWKLMIGTLVMLGGGYAGEAGYIAVLPAFIIGMAGWLYILYEIFAGEAGKASAEQSSAAVKSAFETMRWIVTIGWAIYPLGYFMGYLAGGVDAASLNVIYNLADVLNKIAFGVIIWNVAVTESESAS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTACGTTATAAAAAGTGTGCAATTATTTTTAATGGAGTTAAAAAACATGAAAGTAGTTTCAAGCAAATCTCTGACGGGGCTGGTAACAGCTGCGTTGGTTGCCTTCCCAACTATTGCTTCTGCAGCAGGTCACAGTAGTGCTCTAAAAGCTGACGATTTTGTTGGTATTTCATTTTGGTTTATTTCAATGGCGTTGATAGCTGCAACGGCATTTTTCTTTCTTGAGACACAACGTGTTTCAGCA---AAATGGAAAACCTCACTAACAGTATCAGGTTTGGTAACTTTAGTGGCTGCTGTTCACTATTTCTACATGCGTGATATTTGGGTT------------------------------TCAACA---------------------GGAGAGTCACCAACAGTCTTCCGTTACATTGATTGG------------------------CTAATTACTGTTCCACTTCTCATGGTTGAATTTTACATAATTCTTCGTGCA---------GCT---GGGGCAGCTTCAGCC---AGTATC------------------------------------TTCTGGAAG---TTGATGATTGGTACTTTGGTAATGTTGGGTGGCGGTTACGCAGGTGAA---------GCT------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------GCAGTT------------------TTGCCGGCT---TTCATTATTGGAATGGCGGGCTGGCTTTACATTCTATATGAAATC---------------TTT------GCT---GGTGAAGCAGGGAAGGCGTCTGCAGAA------CAA---TCTTCTGCAGCTGTG---AAG---TCC---GCT---TTT---GAA---ACAATG---CGTTGGATTGTAACTATT---------------------------------------------------------------GGCTGG---------GCTATTTACCCACTTGGATATTTTATGGGGTACTTG---------------------------------------GCAGGCGGTGTAGATGCAGCCTCATTAAATGTAATCTACAACCTCGCTGACGTGTTAAATAAAATTGCGTTTGGCGTAATCATTTGGAATGTTGCAGTCACAGAA---AGTGAATCCGCAAGC------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------IYVIKSVQLFLMELKNMKVVSSKSLTGLVTAALVAFPTIASAAGHSSALKADDFVGISFWFISMALIAATAFFFLETQRVSA-KWKTSLTVSGLVTLVAAVHYFYMRDIWV----------ST-------GESPTVFRYIDW--------LITVPLLMVEFYIILRA---A-GAASA-SI------------FWK-LMIGTLVMLGGGYAGE---A------G--Y-----------I----------------------AV------LPA-FIIGMAGWLYILYEI-----F--A-GEAGKASAE--Q-SSAAV-K-S-A-F-E-TM-RWIVTI---------------------GW---AIYPLGYFMGYL-------------AGGVDAASLNVIYNLADVLNKIAFGVIIWNVAVTE-SESAS------------------------------------ [III-env9]_1105161330510 [III-env9] JCVI_ORF_1105161330510_GS019_Coastal_2m jcvi|1105161330510| 1105161330510 JCVI ORF 1105161330510 1105161330510 [[proteorhodopsin super-cluster III/env cluster 9]] proteorhodopsin super-cluster III env cluster 9 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 12-janv-04 Coastal/2m_depth/S_35.4_psu/GS019/Northeast_of_Colon/Caribbean_Sea Caribbean Sea marine 10.716389 -80.25445 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGTCGTTCAATAAAATATTAAAGTATGCCGTACCGGCTACTCTTTTATCATCTTTGCCTTTTGCTGCAAGCGCAGCTGAATTTACAGGCTTAGCAGCGGGTGACTTTGTAGGAATGAGTTTTTGGCTGATTTCTATGGCTCTTGTAGCATCTACTGCATTTTTCTTTTTAGAGACACAAAGAGTTTCTGCTAAATGGAAAACATCGTTGACTGTATCTGGTTTGGTTACATTAGTTGCTGCCGTACACTATTTCTATATGAGAGATGTATGGGTAAGTACAGGAACTTCACCTACTGAATTTAGATATATTGACTGGTTAATAACTGTACCATTATTAATGGTTGAATTTTACATCATTCTAAGAGCATGTACTGCTATAAGTGGCGGATGTTTCTGGAGATTAATGATTGGAAGTATCGTAATGTTAGTTGGTGGATACCTAGGTGAAGCTGGATACATTAACGCTACTTTAGGTTTCGTAATCGGAATGGTTGGATGGATATACATCTTGTATGAGATTTTTGCTGGTGAAGCAGGAAAAGCTAATGCAAGTGATGCTCCAGCGTCAGTTCAATCAGCTTTCTCAACAATGAGATGGATTGTAACAATTGGTTGGGCAATATACCCAATAGGTTACTTTATGGGTTATATGGCAGGCGGTGTAAACGCAGACGCTTTAAATATAATTTACAACTTAGCTGATGTTCTAAACAAAATTGCATTTGGTGTAATTATTTGGAACGTAGCTGTAACAGAATCTGAAAGT MSFNKILKYAVPATLLSSLPFAASAAEFTGLAAGDFVGMSFWLISMALVASTAFFFLETQRVSAKWKTSLTVSGLVTLVAAVHYFYMRDVWVSTGTSPTEFRYIDWLITVPLLMVEFYIILRACTAISGGCFWRLMIGSIVMLVGGYLGEAGYINATLGFVIGMVGWIYILYEIFAGEAGKANASDAPASVQSAFSTMRWIVTIGWAIYPIGYFMGYMAGGVNADALNIIYNLADVLNKIAFGVIIWNVAVTESES ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTCGTTCAATAAAATATTAAAGTATGCCGTACCGGCTACTCTTTTATCATCTTTGCCTTTTGCTGCAAGCGCAGCTGAATTTACAGGCTTAGCAGCGGGTGACTTTGTAGGAATGAGTTTTTGGCTGATTTCTATGGCTCTTGTAGCATCTACTGCATTTTTCTTTTTAGAGACACAAAGAGTTTCTGCT---AAATGGAAAACATCGTTGACTGTATCTGGTTTGGTTACATTAGTTGCTGCCGTACACTATTTCTATATGAGAGATGTATGGGTA------------------------------AGTACA---------------------GGAACTTCACCTACTGAATTTAGATATATTGACTGG------------------------TTAATAACTGTACCATTATTAATGGTTGAATTTTACATCATTCTAAGAGCA---------TGT---ACTGCTATAAGTGGC---GGATGT------------------------------------TTCTGGAGA---TTAATGATTGGAAGTATCGTAATGTTAGTTGGTGGATACCTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACTTTAGGT---TTCGTAATCGGAATGGTTGGATGGATATACATCTTGTATGAGATT---------------TTT------GCT---GGTGAAGCAGGAAAAGCTAATGCAAGT------GAT---GCTCCAGCGTCAGTT---CAA---TCA---GCT---TTC---TCA---ACAATG---AGATGGATTGTAACAATT---------------------------------------------------------------GGTTGG---------GCAATATACCCAATAGGTTACTTTATGGGTTATATG---------------------------------------GCAGGCGGTGTAAACGCAGACGCTTTAAATATAATTTACAACTTAGCTGATGTTCTAAACAAAATTGCATTTGGTGTAATTATTTGGAACGTAGCTGTAACAGAA---TCTGAAAGT------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------MSFNKILKYAVPATLLSSLPFAASAAEFTGLAAGDFVGMSFWLISMALVASTAFFFLETQRVSA-KWKTSLTVSGLVTLVAAVHYFYMRDVWV----------ST-------GTSPTEFRYIDW--------LITVPLLMVEFYIILRA---C-TAISG-GC------------FWR-LMIGSIVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMVGWIYILYEI-----F--A-GEAGKANAS--D-APASV-Q-S-A-F-S-TM-RWIVTI---------------------GW---AIYPIGYFMGYM-------------AGGVNADALNIIYNLADVLNKIAFGVIIWNVAVTE-SES-------------------------------------- [unk-env8]_DQ156373 [unk-env8] fosmid_HF10_3D09_env_samples_DQ156373 gi|76799952|gb|DQ156373| Uncultured organism clone fosmid HF10 3D09 proteorhodopsin gene, partial cds Uncultured organism clone fosmid HF10 3D09 proteorhodopsin gene, partial cds DQ156373 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 16FEB2006 #na North_Pacific_Subtropical_Gyre_[Hawaii]/10_m_below_sea_surface Pacific Ocean marine 22.75 -158 Proteorhodopsin lateral gene transfer between marine planktonic Bacteria and Archaea Frigaard,N.U., Martinez,A., Mincer,T.J. and DeLong,E.F. Nature 439 (7078), 847850 (2006) 16482157 #na TTGATCACCGTACCATTGCAAGTCTCTGAGTTCTACCTCATTCTTGCTGCTATCGGTGTCGCTAGCGCCGCTCTCTTTTGGAGGCTCTTTGGTGCATCCATCGTTATGCTCGTTGCTGGTTTCCTTGCAGAAGCTAACGAAGACATCAGTGCAATCAGTGACGGCATGGTATGGCCATTGTTCGCCGTTGGTATGCTCGCTTGGATTTACATCATCTACGAGATTTGGGCTGGTGAAGCAAAGGAAAGTGTTTCCGGCGCAAGCGAAGGCACACAATTTGCATTCAAGGCTATGGCTCTTATCCTCACTGTA LITVPLQVSEFYLILAAIGVASAALFWRLFGASIVMLVAGFLAEANEDISAISDGMVWPLFAVGMLAWIYIIYEIWAGEAKESVSGASEGTQFAFKAMALILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTACCATTGCAAGTCTCTGAGTTCTACCTCATTCTTGCTGCT---------ATC---GGTGTCGCTAGCGCC---GCTCTC------------------------------------TTTTGGAGG---CTCTTTGGTGCATCCATCGTTATGCTCGTTGCTGGTTTCCTTGCAGAA---------GCT------------------AAC------GAA---------------------------------GACATC---AGTGCA------ATCAGT---------GAC---------------------------GGCATGGTA------------------TGGCCATTG---TTCGCCGTTGGTATGCTCGCTTGGATTTACATCATCTACGAGATT---------------TGG------GCT---GGTGAAGCAAAGGAA---AGTGTTTCC------GGC---GCAAGCGAAGGCACA---CAA---TTT---GCA---TTC---AAG---GCTATG---GCTCTTATCCTCACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GVASA-AL------------FWR-LFGASIVMLVAGFLAE---A------N--E-----------DI-SA--IS---D---------GMV------WPL-FAVGMLAWIYIIYEI-----W--A-GEAKE-SVS--G-ASEGT-Q-F-A-F-K-AM-ALILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ926154 [unk-env8] BOUM_OTU067_env_samples gb|KJ926154| Uncultured bacterium clone BOUM OTU067 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU067 putative proteorhodopsin gene, partial cds KJ926154 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump E97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 34.185167 22.161 #na #na #na #na #na ATAGAGTGGTTGATCACCGTACCATTGCAAGTCTCTGAGTTCTACCTCATTCTTGCTGCTATCGGTGTCGCTAGCGCCGCTCTCTTCTGGAGACTCTTCGGTGCATCCATCGTTATGCTCGTTGCTGGTTTCCTCGCAGAGGCAAACGAAAGCATCGATGCAATCAGCGAGGGCATGGTATGGCCATTGTTCATCGTCGGTATGCTCGCTTGGATCTACATCATCTACGAGATCTGGGCTGGTGAAGCAAAGGAAAGTGTTTCCGACGCAAGCGAAGGTACACAATTTGCATTCAAGGCTATGGCTCTCATCCTCACTGTAGGGTGGGCAATCTAT IEWLITVPLQVSEFYLILAAIGVASAALFWRLFGASIVMLVAGFLAEANESIDAISEGMVWPLFIVGMLAWIYIIYEIWAGEAKESVSDASEGTQFAFKAMALILTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAGAGTGG------------------------TTGATCACCGTACCATTGCAAGTCTCTGAGTTCTACCTCATTCTTGCTGCT---------ATC---GGTGTCGCTAGCGCC---GCTCTC------------------------------------TTCTGGAGA---CTCTTCGGTGCATCCATCGTTATGCTCGTTGCTGGTTTCCTCGCAGAG---------GCA------------------AAC------GAA---------------------------------AGCATC---GATGCA------ATCAGC---------GAG---------------------------GGCATGGTA------------------TGGCCATTG---TTCATCGTCGGTATGCTCGCTTGGATCTACATCATCTACGAGATC---------------TGG------GCT---GGTGAAGCAAAGGAA---AGTGTTTCC------GAC---GCAAGCGAAGGTACA---CAA---TTT---GCA---TTC---AAG---GCTATG---GCTCTCATCCTCACTGTA---------------------------------------------------------------GGGTGG---------GCAATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IEW--------LITVPLQVSEFYLILAA---I-GVASA-AL------------FWR-LFGASIVMLVAGFLAE---A------N--E-----------SI-DA--IS---E---------GMV------WPL-FIVGMLAWIYIIYEI-----W--A-GEAKE-SVS--D-ASEGT-Q-F-A-F-K-AM-ALILTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env8]_DQ156374 [unk-env8] fosmid_HF10_84D07_env_samples_DQ156374 gi|76799954|gb|DQ156374| Uncultured organism clone fosmid HF10 84D07 proteorhodopsin gene, partial cds Uncultured organism clone fosmid HF10 84D07 proteorhodopsin gene, partial cds DQ156374 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 16FEB2006 #na North_Pacific_Subtropical_Gyre_[Hawaii]/10_m_below_sea_surface Pacific Ocean marine 22.75 -158 Proteorhodopsin lateral gene transfer between marine planktonic Bacteria and Archaea Frigaard,N.U., Martinez,A., Mincer,T.J. and DeLong,E.F. Nature 439 (7078), 847850 (2006) 16482157 #na TTGATCACAGTACCTCTACAGGTATCTGAGTTCTACCTAATTCTAGCAGCAATTGGTGCAGCATCTGCTGTGCTATTCTGGAAGCTTTTCGGAGCATCCATTGTTATGCTAGTTGCTGGATTCTTGTCTGAGTCCAGTATCGACGCAGTTGATGGAATGGAAACACCACTGTTCGCAATCGGTGTACTAGCATGGCTATACATCATCTACGAACTGTGGGCTGGAGAAGCAAAGGAAAAGGTCAGCGACGCAAGCGAAGGTACACAATTCGCTTTCAAGGCTATGGCTGGAATCCTAACAGTC LITVPLQVSEFYLILAAIGAASAVLFWKLFGASIVMLVAGFLSESSIDAVDGMETPLFAIGVLAWLYIIYELWAGEAKEKVSDASEGTQFAFKAMAGILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTACCTCTACAGGTATCTGAGTTCTACCTAATTCTAGCAGCA---------ATT---GGTGCAGCATCTGCT---GTGCTA------------------------------------TTCTGGAAG---CTTTTCGGAGCATCCATTGTTATGCTAGTTGCTGGATTCTTGTCTGAG---------TCC------------------AGT---------------------------------------------ATC---GACGCA------GTT------------GAT---------------------------GGAATGGAA------------------ACACCACTG---TTCGCAATCGGTGTACTAGCATGGCTATACATCATCTACGAACTG---------------TGG------GCT---GGAGAAGCAAAGGAA---AAGGTCAGC------GAC---GCAAGCGAAGGTACA---CAA---TTC---GCT---TTC---AAG---GCTATG---GCTGGAATCCTAACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GAASA-VL------------FWK-LFGASIVMLVAGFLSE---S------S---------------I-DA--V----D---------GME------TPL-FAIGVLAWLYIIYEL-----W--A-GEAKE-KVS--D-ASEGT-Q-F-A-F-K-AM-AGILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_DQ156371 [unk-env8] fosmid_HF10_18B11_env_samples_DQ156371 gi|76799948|gb|DQ156371| Uncultured organism clone fosmid HF10 18B11 proteorhodopsin gene, partial cds Uncultured organism clone fosmid HF10 18B11 proteorhodopsin gene, partial cds DQ156371 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 16FEB2006 #na North_Pacific_Subtropical_Gyre_[Hawaii]/10_m_below_sea_surface Pacific Ocean marine 22.75 -158 Proteorhodopsin lateral gene transfer between marine planktonic Bacteria and Archaea Frigaard,N.U., Martinez,A., Mincer,T.J. and DeLong,E.F. Nature 439 (7078), 847850 (2006) 16482157 #na TTGATTACTGTTCCACTACAAGTTTCTGAGTTTTACCTAATTCTTGCTGCTATTGGAGCTGCATCCGCTGCTCTATTCTGGAGACTCTTTGGTGCTTCTATAGTTATGCTAGTTGCTGGTTTCCTATCAGAATCTGGTATTGATGCTGTTGATGGAATGGAATATCCATTGTTCTTCGTCGGTCTTCTAGCATGGGGATACATCATCTACGAACTGTGGGCTGGTGAAGCAAAGGAGAAAGTCAGCGGTGCAAGTGAAGGTACACAATTCGCTTTCAAGGCTATGGCAATCATCCTAACAGTC LITVPLQVSEFYLILAAIGAASAALFWRLFGASIVMLVAGFLSESGIDAVDGMEYPLFFVGLLAWGYIIYELWAGEAKEKVSGASEGTQFAFKAMAIILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTTCCACTACAAGTTTCTGAGTTTTACCTAATTCTTGCTGCT---------ATT---GGAGCTGCATCCGCT---GCTCTA------------------------------------TTCTGGAGA---CTCTTTGGTGCTTCTATAGTTATGCTAGTTGCTGGTTTCCTATCAGAA---------TCT------------------GGT---------------------------------------------ATT---GATGCT------GTT------------GAT---------------------------GGAATGGAA------------------TATCCATTG---TTCTTCGTCGGTCTTCTAGCATGGGGATACATCATCTACGAACTG---------------TGG------GCT---GGTGAAGCAAAGGAG---AAAGTCAGC------GGT---GCAAGTGAAGGTACA---CAA---TTC---GCT---TTC---AAG---GCTATG---GCAATCATCCTAACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GAASA-AL------------FWR-LFGASIVMLVAGFLSE---S------G---------------I-DA--V----D---------GME------YPL-FFVGLLAWGYIIYEL-----W--A-GEAKE-KVS--G-ASEGT-Q-F-A-F-K-AM-AIILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_DQ156372 [unk-env8] fosmid_HF10_22D03_env_samples_DQ156372 gi|76799950|gb|DQ156372| Uncultured organism clone fosmid HF10 22D03 proteorhodopsin gene, partial cds Uncultured organism clone fosmid HF10 22D03 proteorhodopsin gene, partial cds DQ156372 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 16FEB2006 #na North_Pacific_Subtropical_Gyre_[Hawaii]/10_m_below_sea_surface Pacific Ocean marine 22.75 -158 Proteorhodopsin lateral gene transfer between marine planktonic Bacteria and Archaea Frigaard,N.U., Martinez,A., Mincer,T.J. and DeLong,E.F. Nature 439 (7078), 847850 (2006) 16482157 #na CTGATCACAGTTCCACTACAAGTCACTGAGTTCTATCTAATTCTAGCAGCTGTAGGAGTAGCTACTGCCGCACTATTCTGGCGCCTATTCGGAGCATCCCTTGTAATGCTCATCGCTGGCTATCTAGGAGAGGCAGAGTCTGGTACCGGTGGCCTCGTAGAAGGCATGGAGATGCTAATGTTCGTTATCGGTCTCGCTGGTTGGTTCTACATCATGTACGAAATATGGGGTGGAGAAGCACAAAAGAGTGCCGCAACAGCATCTGAGTCTACTCAGTTCGCATTCAAGGCAATGGCAGCTATTTTGACAGTC LITVPLQVTEFYLILAAVGVATAALFWRLFGASLVMLIAGYLGEAESGTGGLVEGMEMLMFVIGLAGWFYIMYEIWGGEAQKSAATASESTQFAFKAMAAILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTTCCACTACAAGTCACTGAGTTCTATCTAATTCTAGCAGCT---------GTA---GGAGTAGCTACTGCC---GCACTA------------------------------------TTCTGGCGC---CTATTCGGAGCATCCCTTGTAATGCTCATCGCTGGCTATCTAGGAGAG---------GCA------------------GAG------TCT---------------------------------GGTACC---GGTGGC------CTCGTA---------GAA---------------------------GGCATGGAG------------------ATGCTAATG---TTCGTTATCGGTCTCGCTGGTTGGTTCTACATCATGTACGAAATA---------------TGG------GGT---GGAGAAGCACAAAAG---AGTGCCGCA------ACA---GCATCTGAGTCTACT---CAG---TTC---GCA---TTC---AAG---GCAATG---GCAGCTATTTTGACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVTEFYLILAA---V-GVATA-AL------------FWR-LFGASLVMLIAGYLGE---A------E--S-----------GT-GG--LV---E---------GME------MLM-FVIGLAGWFYIMYEI-----W--G-GEAQK-SAA--T-ASEST-Q-F-A-F-K-AM-AAILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_EU915732 [unk-env8] APF9065_env_samples_EU915732 gi|229358346|gb|EU915732| Uncultured microorganism clone APF9065 putative proteorhodopsin gene, partial cds Uncultured microorganism clone APF9065 putative proteorhodopsin gene, partial cds EU915732 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample_at_75_m_depth Atlantic Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na GTATTAGCGGCTACTGTATTCTTCTTTATGGAAGCAATGAAAGTTGACGCAAAGTGGAGAACTTCTCTAGTTGTTGCCGGTCTTGTTACAATGGTTGCTGCTGTTCACTATTTTTATATGAGAGCAGTATGGATTGAAACAGCTGATACACCAACAGTATACAGATATATCGACTGGATTTTAACTGTTCCACTTCAAATTGTAGAATTCTATTTAATACTTGTAGCTGTGGGAGCTGTTGCTGGTAGAGTATTCTGGAATTTGTTAGTTGCTTCACTTGTGATGCTTATTGCAGGTTACGTAGGTGAAGTTGGATATGTAAATGTTTGGCTCGCCTTCATCGTTGGTATGCTAGGATGGATTTACATCCTTTATGCAATTTTTGCTGGGGACGCTCAGGAAAATCTATCAAGTGCACCTGAAGGAGTACAATCAGCTTTTAGAACAATGAGACTTATTGTTTTAGTTGGCTGGGCCATCTAC VLAATVFFFMEAMKVDAKWRTSLVVAGLVTMVAAVHYFYMRAVWIETADTPTVYRYIDWILTVPLQIVEFYLILVAVGAVAGRVFWNLLVASLVMLIAGYVGEVGYVNVWLAFIVGMLGWIYILYAIFAGDAQENLSSAPEGVQSAFRTMRLIVLVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGGCTACTGTATTCTTCTTTATGGAAGCAATGAAAGTTGACGCA---AAGTGGAGAACTTCTCTAGTTGTTGCCGGTCTTGTTACAATGGTTGCTGCTGTTCACTATTTTTATATGAGAGCAGTATGGATT---------------------------------------------------GAAACAGCTGATACACCAACAGTATACAGATATATCGACTGG------------------------ATTTTAACTGTTCCACTTCAAATTGTAGAATTCTATTTAATACTTGTAGCT---------GTG---GGAGCTGTTGCTGGT---AGAGTA------------------------------------TTCTGGAAT---TTGTTAGTTGCTTCACTTGTGATGCTTATTGCAGGTTACGTAGGTGAA---------GTT------------------GGA------TAT---------------------------------GTA------------------------------------------------------------------AATGTT------------------TGGCTCGCC---TTCATCGTTGGTATGCTAGGATGGATTTACATCCTTTATGCAATT---------------TTT------GCT---GGGGACGCTCAGGAA---AATCTATCA------AGT---GCACCTGAAGGAGTA---CAA---TCA---GCT---TTT---AGA---ACAATG---AGACTTATTGTTTTAGTT---------------------------------------------------------------GGCTGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------VLAATVFFFMEAMKVDA-KWRTSLVVAGLVTMVAAVHYFYMRAVWI-----------------ETADTPTVYRYIDW--------ILTVPLQIVEFYLILVA---V-GAVAG-RV------------FWN-LLVASLVMLIAGYVGE---V------G--Y-----------V----------------------NV------WLA-FIVGMLGWIYILYAI-----F--A-GDAQE-NLS--S-APEGV-Q-S-A-F-R-TM-RLIVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env8]_EF088525 [unk-env8] clone_APF9065_EF088525 gi|126843267|gb|EF088525| Uncultured bacterium clone APF9065 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone APF9065 putative proteorhodopsin gene, partial cds. EF088525 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na 75m water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na GTATTAGCGGCTACTGTATTCTTCTTTATGGAAGCAATGAAAGTTGACGCAAAGTGGAGAACTTCTCTAGTTGTTGCCGGTCTTGTTACAATGGTTGCTGCTGTTCACTATTTTTATATGAGAGCAGTATGGATTGAAACAGCTGATACACCAACAGTATACAGATATATCGACTGGATTTTAACTGTTCCACTTCAAATTGTAGAATTCTATTTAATACTTGTAGCTGTGGGAGCTGTTGCTGGTAGAGTATTCTGGAATTTGTTAGTTGCTTCACTTGTGATGCTTATTGCAGGTTACGTAGGTGAAGTTGGATATGTAAATGTTTGGCTCGCCTTCATCGTTGGTATGCTAGGATGGATTTACATCCTTTATGCAATTTTTGCTGGGGACGCTCAGGAAAATCTATCAAGTGCACCTGAAGGAGTACAATCAGCTTTTAGAACAATGAGACTTATTGTTTTAGTTGGCTGGGCCATCTACCCA VLAATVFFFMEAMKVDAKWRTSLVVAGLVTMVAAVHYFYMRAVWIETADTPTVYRYIDWILTVPLQIVEFYLILVAVGAVAGRVFWNLLVASLVMLIAGYVGEVGYVNVWLAFIVGMLGWIYILYAIFAGDAQENLSSAPEGVQSAFRTMRLIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGGCTACTGTATTCTTCTTTATGGAAGCAATGAAAGTTGACGCA---AAGTGGAGAACTTCTCTAGTTGTTGCCGGTCTTGTTACAATGGTTGCTGCTGTTCACTATTTTTATATGAGAGCAGTATGGATT---------------------------------------------------GAAACAGCTGATACACCAACAGTATACAGATATATCGACTGG------------------------ATTTTAACTGTTCCACTTCAAATTGTAGAATTCTATTTAATACTTGTAGCT---------GTG---GGAGCTGTTGCTGGT---AGAGTA------------------------------------TTCTGGAAT---TTGTTAGTTGCTTCACTTGTGATGCTTATTGCAGGTTACGTAGGTGAA---------GTT------------------GGA------TAT---------------------------------GTA------------------------------------------------------------------AATGTT------------------TGGCTCGCC---TTCATCGTTGGTATGCTAGGATGGATTTACATCCTTTATGCAATT---------------TTT------GCT---GGGGACGCTCAGGAA---AATCTATCA------AGT---GCACCTGAAGGAGTA---CAA---TCA---GCT---TTT---AGA---ACAATG---AGACTTATTGTTTTAGTT---------------------------------------------------------------GGCTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------VLAATVFFFMEAMKVDA-KWRTSLVVAGLVTMVAAVHYFYMRAVWI-----------------ETADTPTVYRYIDW--------ILTVPLQIVEFYLILVA---V-GAVAG-RV------------FWN-LLVASLVMLIAGYVGE---V------G--Y-----------V----------------------NV------WLA-FIVGMLGWIYILYAI-----F--A-GDAQE-NLS--S-APEGV-Q-S-A-F-R-TM-RLIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env8]_DQ927036 [unk-env8] clone_AT06001_DQ927036 gi|116294187|gb|DQ927036| Uncultured bacterium clone AT06001 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT06001 putative proteorhodopsin gene, partial cds. DQ927036 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na CTATTAGCGGCTACTGTATTCTTCTTTATGGAATCAATGAAAGTTGATGCAAAATGGAGAACATCCTTAGTTGTTGCTGGTCTTGTTACAATGATTGCTGCTGTTCACTATTTTTATATGAGAGCAGTATGGATTGAAACAGCTGATACACCAACAGTATACAGATATATTGATTGGATTTTAACTGTTCCACTTCAAATTGTAGAATTCTATTTGATACTTGCAGCTGTTGGAGCTGTTGCTGGTAGAGTATTCTGGAATTTATTAGTTGCTTCACTTGTAATGCTTATTGCTGGTTATGTAGGAGAAGTTGGATATGTGAATGTATGGCTCGCCTTCATAGTTGGTATGCTAGGATGGATTTATATCCTCTATGCAATTTTTGCTGGGGACGCTCAGGAAAATCTATCAAGTGCACCTGAAGGAGTACAATCAGCTTTTAGAACAATGAGACTTATTGTTTTAGTTGGATGGGCCATCTACCCA LLAATVFFFMESMKVDAKWRTSLVVAGLVTMIAAVHYFYMRAVWIETADTPTVYRYIDWILTVPLQIVEFYLILAAVGAVAGRVFWNLLVASLVMLIAGYVGEVGYVNVWLAFIVGMLGWIYILYAIFAGDAQENLSSAPEGVQSAFRTMRLIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTTATGGAATCAATGAAAGTTGATGCA---AAATGGAGAACATCCTTAGTTGTTGCTGGTCTTGTTACAATGATTGCTGCTGTTCACTATTTTTATATGAGAGCAGTATGGATT---------------------------------------------------GAAACAGCTGATACACCAACAGTATACAGATATATTGATTGG------------------------ATTTTAACTGTTCCACTTCAAATTGTAGAATTCTATTTGATACTTGCAGCT---------GTT---GGAGCTGTTGCTGGT---AGAGTA------------------------------------TTCTGGAAT---TTATTAGTTGCTTCACTTGTAATGCTTATTGCTGGTTATGTAGGAGAA---------GTT------------------GGA------TAT---------------------------------GTG------------------------------------------------------------------AATGTA------------------TGGCTCGCC---TTCATAGTTGGTATGCTAGGATGGATTTATATCCTCTATGCAATT---------------TTT------GCT---GGGGACGCTCAGGAA---AATCTATCA------AGT---GCACCTGAAGGAGTA---CAA---TCA---GCT---TTT---AGA---ACAATG---AGACTTATTGTTTTAGTT---------------------------------------------------------------GGATGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFMESMKVDA-KWRTSLVVAGLVTMIAAVHYFYMRAVWI-----------------ETADTPTVYRYIDW--------ILTVPLQIVEFYLILAA---V-GAVAG-RV------------FWN-LLVASLVMLIAGYVGE---V------G--Y-----------V----------------------NV------WLA-FIVGMLGWIYILYAI-----F--A-GDAQE-NLS--S-APEGV-Q-S-A-F-R-TM-RLIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env8]_EU915761 [unk-env8] PF75114_env_samples_EU915761 gi|229358404|gb|EU915761| Uncultured microorganism clone PF75114 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF75114 putative proteorhodopsin gene, partial cds EU915761 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTTGCCGCTACTGTTTTCTTCTTTATGGAATCAATGAAAGTTGATGCAAGATGGAGAACATCCTTAGTCGTTGCTGGTCTTGTTACAATGATTGCTGCTGTTCACTATTTTTACATGAGAGCAGTATGGATTGAAACAGCTGATACACCAACAGTATACAGATATATTGACTGGATTTTAACAGTCCCACTTCAAATTGTAGAATTCTATTTGATACTTGCAGCTGTAGGAGCTGTTGCTGGTAGAGTATTCTGGAATTTATTAGTTGCTTCACTTGTGATGCTTATTGCAGGTTACGTAGGAGAAGTTGGATATGTGAATGTTTGGCTCGCCTTCATCGTTGGTATGCTAGGATGGATTTACATTCTTTATGCAATTTTTGCTGGTGACGCTCAGGAAAATCTATCAAGTGCACCTGAAGGAGTACAATCAGCTTTTAGAACAATGAGACTTATTGTTTTAGTTGGTTGGGCTATCTAC MVAATVFFFMESMKVDARWRTSLVVAGLVTMIAAVHYFYMRAVWIETADTPTVYRYIDWILTVPLQIVEFYLILAAVGAVAGRVFWNLLVASLVMLIAGYVGEVGYVNVWLAFIVGMLGWIYILYAIFAGDAQENLSSAPEGVQSAFRTMRLIVLVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTTTTCTTCTTTATGGAATCAATGAAAGTTGATGCA---AGATGGAGAACATCCTTAGTCGTTGCTGGTCTTGTTACAATGATTGCTGCTGTTCACTATTTTTACATGAGAGCAGTATGGATT---------------------------------------------------GAAACAGCTGATACACCAACAGTATACAGATATATTGACTGG------------------------ATTTTAACAGTCCCACTTCAAATTGTAGAATTCTATTTGATACTTGCAGCT---------GTA---GGAGCTGTTGCTGGT---AGAGTA------------------------------------TTCTGGAAT---TTATTAGTTGCTTCACTTGTGATGCTTATTGCAGGTTACGTAGGAGAA---------GTT------------------GGA------TAT---------------------------------GTG------------------------------------------------------------------AATGTT------------------TGGCTCGCC---TTCATCGTTGGTATGCTAGGATGGATTTACATTCTTTATGCAATT---------------TTT------GCT---GGTGACGCTCAGGAA---AATCTATCA------AGT---GCACCTGAAGGAGTA---CAA---TCA---GCT---TTT---AGA---ACAATG---AGACTTATTGTTTTAGTT---------------------------------------------------------------GGTTGG---------GCTATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMESMKVDA-RWRTSLVVAGLVTMIAAVHYFYMRAVWI-----------------ETADTPTVYRYIDW--------ILTVPLQIVEFYLILAA---V-GAVAG-RV------------FWN-LLVASLVMLIAGYVGE---V------G--Y-----------V----------------------NV------WLA-FIVGMLGWIYILYAI-----F--A-GDAQE-NLS--S-APEGV-Q-S-A-F-R-TM-RLIVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env8]_DQ927011 [unk-env8] clone_AT06002_DQ927011 gi|116294137|gb|DQ927011| Uncultured bacterium clone AT06002 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT06002 putative proteorhodopsin gene, partial cds. DQ927011 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGGTGGCCGCTACTGCTTTCTTCTTTATGGAATCAATGAAAGTTGATGCAAAATGGAGAACATCCTTAGTTGTTGCTGGTCTTGTTACAATGATTGCGGCTGTTCACTATTTTTATATGAGAGCAGTATGGATTGAAACAGCTGACACACCAACAGTATACAGATATATCGACTGGATTTTAACTGTTCCACTTCAAATTGTAGAATTCTATTTAATACTTGCAGCTGTTGGAGCTGTTGCTGGTAGAGTATTCTGGAATTTATTAGTTGCATCACTTGTGATGCTTATTGCAGGTTACGTAGGAGAAGTTGGATATGTAAATGTTTGGCTCGCCTTTATCGTTGGTATGCTAGGATGGATTTACATTCTTTATGCAATTTTTGCCGGTGATGCTCAGGAAAATCTATCAAGTGCACCTGAAGGAGTACAATCAGCTTTTAGAACAATGAGACTCATTGTTTTAGTTGGGTGGGCTATCTACCCA MVAATAFFFMESMKVDAKWRTSLVVAGLVTMIAAVHYFYMRAVWIETADTPTVYRYIDWILTVPLQIVEFYLILAAVGAVAGRVFWNLLVASLVMLIAGYVGEVGYVNVWLAFIVGMLGWIYILYAIFAGDAQENLSSAPEGVQSAFRTMRLIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCTTTCTTCTTTATGGAATCAATGAAAGTTGATGCA---AAATGGAGAACATCCTTAGTTGTTGCTGGTCTTGTTACAATGATTGCGGCTGTTCACTATTTTTATATGAGAGCAGTATGGATT---------------------------------------------------GAAACAGCTGACACACCAACAGTATACAGATATATCGACTGG------------------------ATTTTAACTGTTCCACTTCAAATTGTAGAATTCTATTTAATACTTGCAGCT---------GTT---GGAGCTGTTGCTGGT---AGAGTA------------------------------------TTCTGGAAT---TTATTAGTTGCATCACTTGTGATGCTTATTGCAGGTTACGTAGGAGAA---------GTT------------------GGA------TAT---------------------------------GTA------------------------------------------------------------------AATGTT------------------TGGCTCGCC---TTTATCGTTGGTATGCTAGGATGGATTTACATTCTTTATGCAATT---------------TTT------GCC---GGTGATGCTCAGGAA---AATCTATCA------AGT---GCACCTGAAGGAGTA---CAA---TCA---GCT---TTT---AGA---ACAATG---AGACTCATTGTTTTAGTT---------------------------------------------------------------GGGTGG---------GCTATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMESMKVDA-KWRTSLVVAGLVTMIAAVHYFYMRAVWI-----------------ETADTPTVYRYIDW--------ILTVPLQIVEFYLILAA---V-GAVAG-RV------------FWN-LLVASLVMLIAGYVGE---V------G--Y-----------V----------------------NV------WLA-FIVGMLGWIYILYAI-----F--A-GDAQE-NLS--S-APEGV-Q-S-A-F-R-TM-RLIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env8]_EU915781 [unk-env8] PF97532_env_samples_EU915781 gi|229358444|gb|EU915781| Uncultured microorganism clone PF97532 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF97532 putative proteorhodopsin gene, partial cds EU915781 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTGGCCGCTACTGTATTCTTCTTTATGGAATCAATGAAAGTTGATGCAAAATGGAGAACATCCTTAGTTGTTGCTGGTCTTGTAACAATGATTGCTGCTGTTCACTATTTTTATATGAGAGCAGTATGGATTGAAACAGCTGATACACCAACAGTGTATAGATATATTGACTGGATTTTAACTGTTCCACTTCAAATTGTAGAATTCTATTTGATACTTGCAGCTGTTGGAGCTGTTGCTGGTAGAGTATTCTGGAATCTATTAGTTGCTTCACTGATAATGCTTATTGCAGGTTACGTAGGTGAAGTTGGTTATGTGAATGTATGGCCCGCCTTCATCGTTGGTATGCTAGGATGGATTTATATTCTCTATGCAATTTTTGCTGGGGACGCTCAGGAAAATCTATCAAGTGCACCTGAAGGAGTACAATCAGCTTTTAGAACAATGAGACTTATTGTTTTAGTTGGGTGGGCGATTTAC MLAATVFFFMESMKVDAKWRTSLVVAGLVTMIAAVHYFYMRAVWIETADTPTVYRYIDWILTVPLQIVEFYLILAAVGAVAGRVFWNLLVASLIMLIAGYVGEVGYVNVWPAFIVGMLGWIYILYAIFAGDAQENLSSAPEGVQSAFRTMRLIVLVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGTATTCTTCTTTATGGAATCAATGAAAGTTGATGCA---AAATGGAGAACATCCTTAGTTGTTGCTGGTCTTGTAACAATGATTGCTGCTGTTCACTATTTTTATATGAGAGCAGTATGGATT---------------------------------------------------GAAACAGCTGATACACCAACAGTGTATAGATATATTGACTGG------------------------ATTTTAACTGTTCCACTTCAAATTGTAGAATTCTATTTGATACTTGCAGCT---------GTT---GGAGCTGTTGCTGGT---AGAGTA------------------------------------TTCTGGAAT---CTATTAGTTGCTTCACTGATAATGCTTATTGCAGGTTACGTAGGTGAA---------GTT------------------GGT------TAT---------------------------------GTG------------------------------------------------------------------AATGTA------------------TGGCCCGCC---TTCATCGTTGGTATGCTAGGATGGATTTATATTCTCTATGCAATT---------------TTT------GCT---GGGGACGCTCAGGAA---AATCTATCA------AGT---GCACCTGAAGGAGTA---CAA---TCA---GCT---TTT---AGA---ACAATG---AGACTTATTGTTTTAGTT---------------------------------------------------------------GGGTGG---------GCGATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFMESMKVDA-KWRTSLVVAGLVTMIAAVHYFYMRAVWI-----------------ETADTPTVYRYIDW--------ILTVPLQIVEFYLILAA---V-GAVAG-RV------------FWN-LLVASLIMLIAGYVGE---V------G--Y-----------V----------------------NV------WPA-FIVGMLGWIYILYAI-----F--A-GDAQE-NLS--S-APEGV-Q-S-A-F-R-TM-RLIVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env8]_KJ926137 [unk-env8] BOUM_OTU050_env_samples gb|KJ926137| Uncultured bacterium clone BOUM OTU050 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU050 putative proteorhodopsin gene, partial cds KJ926137 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 33.709667 32.644667 #na #na #na #na #na GTTGACTGGATTATTACTGTTCCGCTTCAGATCGTTGAATTTTATCTTATTTTAGCAGCTGTTGGAGCAGTAGCTGGAAGAGTTTTCTGGAACCTTCTAATTGCTTCTTTAGTAATGATAATTGCAGGATATTGTGGTGAAGTTGGATATGTAAATGTATGGGTTGGATTTATAATCGGTATGCTTGGTTGGATTTATATCCTTTATGCTATCTTTGCTGGTGATGCTCAAGAAAGATTATCTGAAGCTCCAGAAGGAGTTCAAAATGCTTTCAAAACAATGAGACTAATTGTTTTAGTCGGCTGGGCAATTTAC VDWIITVPLQIVEFYLILAAVGAVAGRVFWNLLIASLVMIIAGYCGEVGYVNVWVGFIIGMLGWIYILYAIFAGDAQERLSEAPEGVQNAFKTMRLIVLVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGACTGG------------------------ATTATTACTGTTCCGCTTCAGATCGTTGAATTTTATCTTATTTTAGCAGCT---------GTT---GGAGCAGTAGCTGGA---AGAGTT------------------------------------TTCTGGAAC---CTTCTAATTGCTTCTTTAGTAATGATAATTGCAGGATATTGTGGTGAA---------GTT------------------GGA------TAT---------------------------------GTA------------------------------------------------------------------AATGTA------------------TGGGTTGGA---TTTATAATCGGTATGCTTGGTTGGATTTATATCCTTTATGCTATC---------------TTT------GCT---GGTGATGCTCAAGAA---AGATTATCT------GAA---GCTCCAGAAGGAGTT---CAA---AAT---GCT---TTC---AAA---ACAATG---AGACTAATTGTTTTAGTC---------------------------------------------------------------GGCTGG---------GCAATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------IITVPLQIVEFYLILAA---V-GAVAG-RV------------FWN-LLIASLVMIIAGYCGE---V------G--Y-----------V----------------------NV------WVG-FIIGMLGWIYILYAI-----F--A-GDAQE-RLS--E-APEGV-Q-N-A-F-K-TM-RLIVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_DQ422185 [unk-Proteo2-Glaciecola] clone_med-0m-d1_DQ422185 gi|90023890|gb|DQ422185| Uncultured bacterium clone med-0m-d1 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-d1 putative proteorhodopsin gene, partial cds. DQ422185 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTTTTGACGGTACCACTGCAGATTATAGAATTTTACCTCATCCTCGCAGCAATCGCTGTTGTCAGAGCCGCACTATTTTGGAAGTTAATGGTCGCATCTGTGGCAATGCTCGTCTTTGGATTTTTTGGCGAACTAGGCGTCTATCCTCTGCTCTTAGGTCTTCTTGGCGTAGCAGCGTGGGGCTACATCATCTACGAAATTTTCTTGGGTGAGGCCAGCAAAATCAGTGCAGAAAGTGGAACAGCTGCGAGCCAGATGGCTTTCAATGCTCTTCGACTAATTGTCACGATTGGTTGGGCTATTTATCCA RYIDWLLTVPLQIIEFYLILAAIAVVRAALFWKLMVASVAMLVFGFFGELGVYPLLLGLLGVAAWGYIIYEIFLGEASKISAESGTAASQMAFNALRLIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTTTTGACGGTACCACTGCAGATTATAGAATTTTACCTCATCCTCGCAGCA---------ATC---GCTGTTGTCAGAGCC---GCACTA------------------------------------TTTTGGAAG---TTAATGGTCGCATCTGTGGCAATGCTCGTCTTTGGATTTTTTGGCGAA---------CTA------------------GGC------GTC---------------------------------TAT------------------------------------------------------------------CCTCTG------------------CTCTTAGGT------CTTCTTGGCGTAGCAGCGTGGGGCTACATCATCTACGAAATT---------------TTC------TTG---GGTGAGGCCAGCAAAATCAGTGCAGAA------AGT---GGAACAGCTGCGAGC---CAG---ATG---GCT---TTC---AAT---GCTCTT---CGACTAATTGTCACGATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMVASVAMLVFGFFGE---L------G--V-----------Y----------------------PL------LLG--LLGVAAWGYIIYEI-----F--L-GEASKISAE--S-GTAAS-Q-M-A-F-N-AL-RLIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_DQ203692 [unk-Proteo2-Glaciecola] medHO155D10_env_samples_DQ203692 gi|77547832|gb|DQ203692| Uncultured bacterium clone medHO155D10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155D10 predicted proteorhodopsin gene, partial cds DQ203692 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGATTGGCTATTAACCGTGCCTCTGCAGATCGTCGAGTTTTACTTGATCCTTGCTGCAATAGCCATAGTTCGAGCTGCGTTGTTCTGGAAGCTGATGATCGCCTCATTGGTGATGCTCATCTTCGGATTCTTGGGTGAAGCTAACCTAATGAACTACTGGTTGGGATTTGCTATTGGTATGGCTGGGTGGGGATATATCCTCTATGAAATTTTCCTCGGCGAAGCAAGCCAGATCAGTGCTGCTCAAGGCACTGAGGCAAGTAAAACTGCCTTCAACGCCCTCAGGCTGATTGTATCTATTGGGTGGGCCATTTATCCA SYIDWLLTVPLQIVEFYLILAAIAIVRAALFWKLMIASLVMLIFGFLGEANLMNYWLGFAIGMAGWGYILYEIFLGEASQISAAQGTEASKTAFNALRLIVSIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGATTGG------------------------CTATTAACCGTGCCTCTGCAGATCGTCGAGTTTTACTTGATCCTTGCTGCA---------ATA---GCCATAGTTCGAGCT---GCGTTG------------------------------------TTCTGGAAG---CTGATGATCGCCTCATTGGTGATGCTCATCTTCGGATTCTTGGGTGAA---------GCT------------------AAC------CTA---------------------------------ATG------------------------------------------------------------------AACTAC------------------TGGTTGGGA---TTTGCTATTGGTATGGCTGGGTGGGGATATATCCTCTATGAAATT---------------TTC------CTC---GGCGAAGCAAGCCAGATCAGTGCTGCT------CAA---GGCACTGAGGCAAGT---AAA---ACT---GCC---TTC---AAC---GCCCTC---AGGCTGATTGTATCTATT---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LLTVPLQIVEFYLILAA---I-AIVRA-AL------------FWK-LMIASLVMLIFGFLGE---A------N--L-----------M----------------------NY------WLG-FAIGMAGWGYILYEI-----F--L-GEASQISAA--Q-GTEAS-K-T-A-F-N-AL-RLIVSI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_EU079207 [unk-Proteo2-Glaciecola] NASB_69_env_samples_EU079207 gi|156106574|gb|EU079207| Uncultured organism clone NASB 69 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 69 putative proteorhodopsin gene, partial cds EU079207 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGATATGTTGACTGGCTATTAACCGTGCCTCTGCAGATCGTTGAGTTCTACTTGATTTTGGCGGCGATAGCCGTAGTTCGAGCTGCTTTGTTCTGGAAGCTGATGATCGCCTCACTTGTGATGCTAATCTTCGGATTCTTGGGTGAAGCGAACCTAATGAACTACTGGTTAGGGTTTGCTATTGGTATGGCTGGGTGGGGATATATCCTCTATGAAATTTTCCTCGGCGAAGCAAGCCAGATCAGTGCTGCTCAGGGCACTGAGGCAAGTAAAACTGCCTTCAACGCTCTCAGGCTGATTGTATCTATTGGTTGGGCCATTTAC RYVDWLLTVPLQIVEFYLILAAIAVVRAALFWKLMIASLVMLIFGFLGEANLMNYWLGFAIGMAGWGYILYEIFLGEASQISAAQGTEASKTAFNALRLIVSIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATATGTTGACTGG------------------------CTATTAACCGTGCCTCTGCAGATCGTTGAGTTCTACTTGATTTTGGCGGCG---------ATA---GCCGTAGTTCGAGCT---GCTTTG------------------------------------TTCTGGAAG---CTGATGATCGCCTCACTTGTGATGCTAATCTTCGGATTCTTGGGTGAA---------GCG------------------AAC------CTA---------------------------------ATG------------------------------------------------------------------AACTAC------------------TGGTTAGGG---TTTGCTATTGGTATGGCTGGGTGGGGATATATCCTCTATGAAATT---------------TTC------CTC---GGCGAAGCAAGCCAGATCAGTGCTGCT------CAG---GGCACTGAGGCAAGT---AAA---ACT---GCC---TTC---AAC---GCTCTC---AGGCTGATTGTATCTATT---------------------------------------------------------------GGTTGG---------GCCATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLIFGFLGE---A------N--L-----------M----------------------NY------WLG-FAIGMAGWGYILYEI-----F--L-GEASQISAA--Q-GTEAS-K-T-A-F-N-AL-RLIVSI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_1105101562378 [unk-Proteo2-Glaciecola] JCVI_ORF_1105101562378_GS031_Coastal_upwelling_12m jcvi|1105101562378| 1105101562378 JCVI ORF 1105101562378 1105101562378 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 10-FEB-2004 Coastal_upwelling/12m_depth/S_n.a/GS031/Upwelling/Fernandina_Island/Galapagos_Islands Pacific Ocean marine -0.3011111 -91.651665 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGGAAATGTTAGACATGACCGATTTGGTTGGTGTTACTTTCTGGATCATATCTGCGGCCATGGTCGCAGCTACGTACTTTTTCACTGTCGAGCGTGACCGCGCTGAAGGCAAGTGGAAAACCTCACTCACCGTTGCGGCGTTGGTTACCGGTATTGCTGCGATCCATTACTTCTACATGCGAGGCGTATGGATAGACACACAGCAAAGCCCAATCGTGTTCCGCTATGTGGATTGGCTATTAACCGTGCCTCTGCAGATCGTTGAGTTCTACCTGATCTTGGCTGCGATAGCCGTAGTCCGAGCTGCTTTATTCTGGAAGCTGATGATCGCCTCACTGGTGATGCTGATCTTCGGATTCTTGGGCGAAGCCGGACTAATGAACTACTGGGTAGGATTCATCATCGGTATGGCTGGATGGTTATACATCATCTACGAGATCTTCGCTGGCGAAGCGAGTCAGATCAGCGCGGCTCAAGGCACTGAGGCAAGTAAAACGGCCTTTAACGCGCTTCGACTGATTGTGACTATTGGATGGGCTATTTACCCGATCGGTTACATTGTCGAGCCCTCTATGGGAGCCGGAGCTCTGAATGTTGTCTACAACCTTGCGGATTTTGTGAACAAGATCGCGTTCGGTGTAGTTATTGGTAGCGCCTGCCGACGT MEMLDMTDLVGVTFWIISAAMVAATYFFTVERDRAEGKWKTSLTVAALVTGIAAIHYFYMRGVWIDTQQSPIVFRYVDWLLTVPLQIVEFYLILAAIAVVRAALFWKLMIASLVMLIFGFLGEAGLMNYWVGFIIGMAGWLYIIYEIFAGEASQISAAQGTEASKTAFNALRLIVTIGWAIYPIGYIVEPSMGAGALNVVYNLADFVNKIAFGVVIGSACRR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGAAATGTTAGACATGACCGATTTGGTTGGTGTTACTTTCTGGATCATATCTGCGGCCATGGTCGCAGCTACGTACTTTTTCACTGTCGAGCGTGACCGCGCTGAAGGC---AAGTGGAAAACCTCACTCACCGTTGCGGCGTTGGTTACCGGTATTGCTGCGATCCATTACTTCTACATGCGAGGCGTATGGATA------------------------------GACACA---------------------CAGCAAAGCCCAATCGTGTTCCGCTATGTGGATTGG------------------------CTATTAACCGTGCCTCTGCAGATCGTTGAGTTCTACCTGATCTTGGCTGCG---------ATA---GCCGTAGTCCGAGCT---GCTTTA------------------------------------TTCTGGAAG---CTGATGATCGCCTCACTGGTGATGCTGATCTTCGGATTCTTGGGCGAA---------GCC------------------GGA------CTA---------------------------------ATG------------------------------------------------------------------AACTAC------------------TGGGTAGGA---TTCATCATCGGTATGGCTGGATGGTTATACATCATCTACGAGATC---------------TTC------GCT---GGCGAAGCGAGTCAGATCAGCGCGGCT------CAA---GGCACTGAGGCAAGT---AAA---ACG---GCC---TTT---AAC---GCGCTT---CGACTGATTGTGACTATT---------------------------------------------------------------GGATGG---------GCTATTTACCCGATCGGTTACATTGTCGAGCCCTCTATG---GGA------------------------------------GCC---------GGAGCTCTGAATGTTGTCTACAACCTTGCGGATTTTGTGAACAAGATCGCGTTCGGTGTAGTTATTGGTAGCGCCTGCCGACGT--------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------MEMLDMTDLVGVTFWIISAAMVAATYFFTVERDRAEG-KWKTSLTVAALVTGIAAIHYFYMRGVWI----------DT-------QQSPIVFRYVDW--------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLIFGFLGE---A------G--L-----------M----------------------NY------WVG-FIIGMAGWLYIIYEI-----F--A-GEASQISAA--Q-GTEAS-K-T-A-F-N-AL-RLIVTI---------------------GW---AIYPIGYIVEPSM-G------------A---GALNVVYNLADFVNKIAFGVVIGSACRR------------------------------------------- [unk-Proteo2-Glaciecola]_DQ203412 [unk-Proteo2-Glaciecola] MedHO102G12_env_samples_DQ203412 gi|77547272|gb|DQ203412| Uncultured bacterium clone MedHO102G12 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102G12 predicted proteorhodopsin gene, partial cds DQ203412 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGCTACATCGACTGGCTGTTAACAGTTCCGCTGCAGATTATCGAGTTTTACTTGATTCTTGCGGCCATCGCGGTAGTTCGCGCGGCTCTATTCTGGAAGCTAATGATCGCGTCCATCGTGATGCTGGTCTTCGGTTTCTTGGGCGAGCTTGGCGCGATGAGCTACTGGCCTGCGTTCGCTATCGGAATGGCTGGCTGGCTTTACATTATCTACGAGATCTTCGCAGGTGAAGCAAGCCAGATCAGCGCAGCGAGCGGTACGCCAGCGAGCCAATACGCGTTCAACGCATTGCGCTTGATTGTGACCGTAGGTTGGGCAATCTACCCA RYIDWLLTVPLQIIEFYLILAAIAVVRAALFWKLMIASIVMLVFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAASGTPASQYAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTACATCGACTGG------------------------CTGTTAACAGTTCCGCTGCAGATTATCGAGTTTTACTTGATTCTTGCGGCC---------ATC---GCGGTAGTTCGCGCG---GCTCTA------------------------------------TTCTGGAAG---CTAATGATCGCGTCCATCGTGATGCTGGTCTTCGGTTTCTTGGGCGAG---------CTT------------------GGC------GCG---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCG---TTCGCTATCGGAATGGCTGGCTGGCTTTACATTATCTACGAGATC---------------TTC------GCA---GGTGAAGCAAGCCAGATCAGCGCAGCG------AGC---GGTACGCCAGCGAGC---CAA---TAC---GCG---TTC---AAC---GCATTG---CGCTTGATTGTGACCGTA---------------------------------------------------------------GGTTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASIVMLVFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--S-GTPAS-Q-Y-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_DQ339171 [unk-Proteo2-Glaciecola] clone_S-SOM-B11_DQ339171 gi|85681319|gb|DQ339171| Uncultured bacterium clone S-SOM-B11 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-B11 predicted proteorhodopsin gene, partial cds. DQ339171 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGTTGACAGTTCCGCTGCAGATTATCGAGTTTTACTTGATTCTTGCGGCCATCGCGGTAGTTCGCGCGGCTCTATTCTGGAAGCTAATGATCGCGTCCATCGTGATGCTGGTCTTCGGTTTCTTGGGCGAGCTTGGCGCGATGAGCTACTGGCCTGCGTTCGCTATCGGAATGGCTGGCTGGCTTTACATTATCTACGAGATCTTCGCAGGTGAAGCAAGCCAGATCAGCGCAGCGAGCGGTACGCCAGCGAGCCAATACGCGTTCAACGCATTGCGCTTGATTGTGACCGTAGGGTGGGCCATCTATCCA RYIDWLLTVPLQIIEFYLILAAIAVVRAALFWKLMIASIVMLVFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAASGTPASQYAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGTTGACAGTTCCGCTGCAGATTATCGAGTTTTACTTGATTCTTGCGGCC---------ATC---GCGGTAGTTCGCGCG---GCTCTA------------------------------------TTCTGGAAG---CTAATGATCGCGTCCATCGTGATGCTGGTCTTCGGTTTCTTGGGCGAG---------CTT------------------GGC------GCG---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCG---TTCGCTATCGGAATGGCTGGCTGGCTTTACATTATCTACGAGATC---------------TTC------GCA---GGTGAAGCAAGCCAGATCAGCGCAGCG------AGC---GGTACGCCAGCGAGC---CAA---TAC---GCG---TTC---AAC---GCATTG---CGCTTGATTGTGACCGTA---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASIVMLVFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--S-GTPAS-Q-Y-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_DQ339187 [unk-Proteo2-Glaciecola] clone_S-SOM-C5_DQ339187 gi|85681351|gb|DQ339187| Uncultured bacterium clone S-SOM-C5 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-C5 predicted proteorhodopsin gene, partial cds. DQ339187 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGTTAACAGTTCCGCTGCAGATTATCGAGTTTTACTTGATTCTTGCGGCCATCGCGGTAGTTCGCGCGGCTCTATTCTGGAAGCTAATGATCGCGTCCATCGTGATGCTGGTCTTCGGTTTCTTGGGCGAGCTTGGCGCGATGAGCTACTGGCCTGCGTTCGCTATCGGAATGGCTGGCTGGCTTTACATTATCTACGAGATCTTCGCAGGTGAAGCAAGCCAGATCAGCGCAGCGAGCGGTACGCCAGCGAGCCAATACGCGTTCAACGCATTGCGCTTGATTGTGACCGTAGGGTGGGCAATCTATCCA RYIDWLLTVPLQIIEFYLILAAIAVVRAALFWKLMIASIVMLVFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAASGTPASQYAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGTTAACAGTTCCGCTGCAGATTATCGAGTTTTACTTGATTCTTGCGGCC---------ATC---GCGGTAGTTCGCGCG---GCTCTA------------------------------------TTCTGGAAG---CTAATGATCGCGTCCATCGTGATGCTGGTCTTCGGTTTCTTGGGCGAG---------CTT------------------GGC------GCG---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCG---TTCGCTATCGGAATGGCTGGCTGGCTTTACATTATCTACGAGATC---------------TTC------GCA---GGTGAAGCAAGCCAGATCAGCGCAGCG------AGC---GGTACGCCAGCGAGC---CAA---TAC---GCG---TTC---AAC---GCATTG---CGCTTGATTGTGACCGTA---------------------------------------------------------------GGGTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASIVMLVFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--S-GTPAS-Q-Y-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_DQ422408 [unk-Proteo2-Glaciecola] clone_med-50m-e5_DQ422408 gi|90024336|gb|DQ422408| Uncultured bacterium clone med-50m-e5 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-e5 putative proteorhodopsin gene, partial cds. DQ422408 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTATTAACGGTTCCGCTGCAGATTATCGAGTTTTACTTGATTCTTGCGGCCATCGCGGTAGTTCGCGCGGCTCTATTCTGGAAGCTTATGATCGCATCCATCGTGATGTTGGTCTTCGGTTTCTTGGGCGAGTTTGGCGCGATGAGCTACTGGCCTGCGTTTGCTATCGGAATGGCTGGCTGGCTTTACATCATCTACGAGATCTTCGCGGGTGAAGCGAGCCAGATCAGCGCAGAGAGTGGTACGCCAGCTAGCCAATACGCATTCAACGCATTGCGCTTGATTGTGACCGTAGGTTGGGCTATTTATCCA RYIDWLLTVPLQIIEFYLILAAIAVVRAALFWKLMIASIVMLVFGFLGEFGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAESGTPASQYAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTATTAACGGTTCCGCTGCAGATTATCGAGTTTTACTTGATTCTTGCGGCC---------ATC---GCGGTAGTTCGCGCG---GCTCTA------------------------------------TTCTGGAAG---CTTATGATCGCATCCATCGTGATGTTGGTCTTCGGTTTCTTGGGCGAG---------TTT------------------GGC------GCG---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCG---TTTGCTATCGGAATGGCTGGCTGGCTTTACATCATCTACGAGATC---------------TTC------GCG---GGTGAAGCGAGCCAGATCAGCGCAGAG------AGT---GGTACGCCAGCTAGC---CAA---TAC---GCA---TTC---AAC---GCATTG---CGCTTGATTGTGACCGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASIVMLVFGFLGE---F------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAE--S-GTPAS-Q-Y-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_DQ422195 [unk-Proteo2-Glaciecola] clone_med-0m-d8_DQ422195 gi|90023910|gb|DQ422195| Uncultured bacterium clone med-0m-d8 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-d8 putative proteorhodopsin gene, partial cds. DQ422195 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTATTAACGGTTCCGCTGCAGATTATCGAGTTTTACTTGATTCTTGCGGCCATCGCGGTAGTTCGCGCGGCTCTATTCTGGAAGCTTATGATCGCATCCATCGTGATGTTGGTCTTCGGTTTCTTGGGCGAGCTTGGCGCGATGAGCTACTGGCCTGCGTTTGCTATCGGAATGGCTGGCTGGCTTTACATCATCTACGAGATCTTCGCGGGTGAAGCGAGCCAGATCAGCGCAGAGAGTGGTACGCCAGCTAGCCAATACGCGTTCAACGCATTGCGCTTGATTGTGACCGTAGGTTGGGCGATATATCCA RYIDWLLTVPLQIIEFYLILAAIAVVRAALFWKLMIASIVMLVFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAESGTPASQYAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTATTAACGGTTCCGCTGCAGATTATCGAGTTTTACTTGATTCTTGCGGCC---------ATC---GCGGTAGTTCGCGCG---GCTCTA------------------------------------TTCTGGAAG---CTTATGATCGCATCCATCGTGATGTTGGTCTTCGGTTTCTTGGGCGAG---------CTT------------------GGC------GCG---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCG---TTTGCTATCGGAATGGCTGGCTGGCTTTACATCATCTACGAGATC---------------TTC------GCG---GGTGAAGCGAGCCAGATCAGCGCAGAG------AGT---GGTACGCCAGCTAGC---CAA---TAC---GCG---TTC---AAC---GCATTG---CGCTTGATTGTGACCGTA---------------------------------------------------------------GGTTGG---------GCGATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASIVMLVFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAE--S-GTPAS-Q-Y-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_DQ422159 [unk-Proteo2-Glaciecola] clone_med-0m-a7_DQ422159 gi|90023838|gb|DQ422159| Uncultured bacterium clone med-0m-a7 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-a7 putative proteorhodopsin gene, partial cds. DQ422159 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na CGATACATAGACTGGCTATTAACGGTTCCGCTGCAGATTATCGAGTTTTACTTGATTCTTGCGGCCATCGCGGTAGTTCGCGCGGCTCTATTCTGGAAGCTTATGATCGCATCCATAGTGATGTTGGTCTTCGGTTTCTTGGGCGAGCTTGGCGCGATGAGCTACTGGCCTGCGTTTGCTATCGGAATGGCTGGCTGGCTTTACATCATCTACGAGATCTTCGCGGGTGAAGCGAGCCAGATCAGCGCGGAGAGTGGTACGCCAGCTAGCCAATACGCGTTCAACGCATTGCGCTTGATTGTGACCGTAGGTTGGGCTATTTATCCA RYIDWLLTVPLQIIEFYLILAAIAVVRAALFWKLMIASIVMLVFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAESGTPASQYAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATAGACTGG------------------------CTATTAACGGTTCCGCTGCAGATTATCGAGTTTTACTTGATTCTTGCGGCC---------ATC---GCGGTAGTTCGCGCG---GCTCTA------------------------------------TTCTGGAAG---CTTATGATCGCATCCATAGTGATGTTGGTCTTCGGTTTCTTGGGCGAG---------CTT------------------GGC------GCG---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCG---TTTGCTATCGGAATGGCTGGCTGGCTTTACATCATCTACGAGATC---------------TTC------GCG---GGTGAAGCGAGCCAGATCAGCGCGGAG------AGT---GGTACGCCAGCTAGC---CAA---TAC---GCG---TTC---AAC---GCATTG---CGCTTGATTGTGACCGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASIVMLVFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAE--S-GTPAS-Q-Y-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_DQ422187 [unk-Proteo2-Glaciecola] clone_med-0m-d11_DQ422187 gi|90023894|gb|DQ422187| Uncultured bacterium clone med-0m-d11 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-d11 putative proteorhodopsin gene, partial cds. DQ422187 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTATTAACGGTTCCGCTGCAGATTATCGAGTTTTACTTGATTCTTGCGGCCATCGCGGTAGTTCGCGCGGCTCTATTCTGGAAGCTTATGATCGCATCCATAGTGATGTTGGTCTTCGGTTTCTTGGGCGAGCTTGGCGCGATGAGCTACTGGCCTGCGTTTGCTATCGGAATGGCTGGCTGGCTTTACATCATCTACGAGATCTTCGCGGGTGAAGCGAGCCAGATCAGCGCGGAGAGTGGTACGCCAGCTAGCCAATACGCGTTCAACGCATTGCGCTTGATTGTGACCGTAGGTTGGGCTATTTATCCA RYIDWLLTVPLQIIEFYLILAAIAVVRAALFWKLMIASIVMLVFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAESGTPASQYAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTATTAACGGTTCCGCTGCAGATTATCGAGTTTTACTTGATTCTTGCGGCC---------ATC---GCGGTAGTTCGCGCG---GCTCTA------------------------------------TTCTGGAAG---CTTATGATCGCATCCATAGTGATGTTGGTCTTCGGTTTCTTGGGCGAG---------CTT------------------GGC------GCG---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCG---TTTGCTATCGGAATGGCTGGCTGGCTTTACATCATCTACGAGATC---------------TTC------GCG---GGTGAAGCGAGCCAGATCAGCGCGGAG------AGT---GGTACGCCAGCTAGC---CAA---TAC---GCG---TTC---AAC---GCATTG---CGCTTGATTGTGACCGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASIVMLVFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAE--S-GTPAS-Q-Y-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_DQ422234 [unk-Proteo2-Glaciecola] clone_med-0m-h12_DQ422234 gi|90023988|gb|DQ422234| Uncultured bacterium clone med-0m-h12 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-h12 putative proteorhodopsin gene, partial cds. DQ422234 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTATTAACGGTTCCGCTGCAGATTATCGAGTTTTACTTGATTCTTGCGGCCATCGCGGTAGTTCGCGCGGCTCTATTCTGGAAGCTTATGATCGCATCCATCGTGATGTTGGTCTTCGGTTTCTTGGGCGAGCTTGGCGCGATGAGCTACTGGCCTGCGTTTGCTATCGGAATGGCTGGCTGGCTTTACATCATCTACGAGATCTTCGCGGGTGAAGCGAGCCAGATCAGCGCAGAGAGTGGTACGCCAGCTAGCCAATACGCGTTCAACGCATTGCGCTTGATTGTGACCGTAGGTTGGGCTATTTATCCA RYIDWLLTVPLQIIEFYLILAAIAVVRAALFWKLMIASIVMLVFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAESGTPASQYAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTATTAACGGTTCCGCTGCAGATTATCGAGTTTTACTTGATTCTTGCGGCC---------ATC---GCGGTAGTTCGCGCG---GCTCTA------------------------------------TTCTGGAAG---CTTATGATCGCATCCATCGTGATGTTGGTCTTCGGTTTCTTGGGCGAG---------CTT------------------GGC------GCG---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCG---TTTGCTATCGGAATGGCTGGCTGGCTTTACATCATCTACGAGATC---------------TTC------GCG---GGTGAAGCGAGCCAGATCAGCGCAGAG------AGT---GGTACGCCAGCTAGC---CAA---TAC---GCG---TTC---AAC---GCATTG---CGCTTGATTGTGACCGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASIVMLVFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAE--S-GTPAS-Q-Y-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_EU079180 [unk-Proteo2-Glaciecola] NASB_36_env_samples_EU079180 gi|156106520|gb|EU079180| Uncultured organism clone NASB 36 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 36 putative proteorhodopsin gene, partial cds EU079180 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGTTACGTAGATTGGCTGCTAACGGTACCGCTGCAAATTATCGAGTTCTATCTGATTCTTGCGGCTATCGCTGTAGTTCGCGCGGCTTTGTTCTGGAAGCTCATGATCGCCTCAATCGTGATGCTGGTCTTCGGCTTCTTGGGCGAACTTGGCGCGATGAGCTACTGGCCTGCGTTCGTAATCGGGATGGCTGGCTGGTTGTACATCATCTACGAGATCTTCGCAGGTGAAGCAAGCCAGATCAGTGCTGCCAATGGTACGGCTGCAAGCCAAGCTGCGTTTAACGCATTGCGCTTGATTGTGACCGTAGGGTGGGCCATTTAT RYVDWLLTVPLQIIEFYLILAAIAVVRAALFWKLMIASIVMLVFGFLGELGAMSYWPAFVIGMAGWLYIIYEIFAGEASQISAANGTAASQAAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTACGTAGATTGG------------------------CTGCTAACGGTACCGCTGCAAATTATCGAGTTCTATCTGATTCTTGCGGCT---------ATC---GCTGTAGTTCGCGCG---GCTTTG------------------------------------TTCTGGAAG---CTCATGATCGCCTCAATCGTGATGCTGGTCTTCGGCTTCTTGGGCGAA---------CTT------------------GGC------GCG---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCG---TTCGTAATCGGGATGGCTGGCTGGTTGTACATCATCTACGAGATC---------------TTC------GCA---GGTGAAGCAAGCCAGATCAGTGCTGCC------AAT---GGTACGGCTGCAAGC---CAA---GCT---GCG---TTT---AAC---GCATTG---CGCTTGATTGTGACCGTA---------------------------------------------------------------GGGTGG---------GCCATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASIVMLVFGFLGE---L------G--A-----------M----------------------SY------WPA-FVIGMAGWLYIIYEI-----F--A-GEASQISAA--N-GTAAS-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_DQ339416 [unk-Proteo2-Glaciecola] clone_S-S4OM-H8_DQ339416 gi|85681803|gb|DQ339416| Uncultured bacterium clone S-S4OM-H8 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-H8 predicted proteorhodopsin gene, partial cds. DQ339416 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGCTAACGGTACCGCTGCAAATTATCGAGTTCTATCTGATTCTTGCGGCTATCGCTGTAGTTCGCGTGGCTTTGTTCTGGAAGCTCATGATCGCCTCAATCGTGATGCTGGTCTTCGGCTTCTTGGGCGAACTTGGCGCGATGAGCTACTGGCCTGCGTTCGCAATCGGGATGGCTGGCTGGTTGTACATCATCTACGAGATCTTCGCAGGTGAAGCAAGCCAGATCAGTGCTGCCAATGGTACGGCTGCAAGCCAAGCTGCGTTTAACGCATTGCGCTTGATTGTGACCGTAGGCTGGGCAATATATCCA RYIDWLLTVPLQIIEFYLILAAIAVVRVALFWKLMIASIVMLVFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAANGTAASQAAFNALRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGCTAACGGTACCGCTGCAAATTATCGAGTTCTATCTGATTCTTGCGGCT---------ATC---GCTGTAGTTCGCGTG---GCTTTG------------------------------------TTCTGGAAG---CTCATGATCGCCTCAATCGTGATGCTGGTCTTCGGCTTCTTGGGCGAA---------CTT------------------GGC------GCG---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCG---TTCGCAATCGGGATGGCTGGCTGGTTGTACATCATCTACGAGATC---------------TTC------GCA---GGTGAAGCAAGCCAGATCAGTGCTGCC------AAT---GGTACGGCTGCAAGC---CAA---GCT---GCG---TTT---AAC---GCATTG---CGCTTGATTGTGACCGTA---------------------------------------------------------------GGCTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQIIEFYLILAA---I-AVVRV-AL------------FWK-LMIASIVMLVFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--N-GTAAS-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_EU079201 [unk-Proteo2-Glaciecola] NASB_59_env_samples_EU079201 gi|156106562|gb|EU079201| Uncultured organism clone NASB 59 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 59 putative proteorhodopsin gene, partial cds EU079201 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGTTATATTGACTGGCTGCTAACGGTACCGCTGCAAATTATCGAGTTCTATCTGATTCTTGCGGCTATCGCTGTAGTTCGCGCGGCTTTGTTCTGGAAGCTCATGATCGCCTCCATCGTGATGCTGGTCTTCGGCTTCTTGGGCGAACTTGGCGCGATGAGCTACTGGCCTGCGTTCGCAATCGGGATGGCTGGCTGGTTGTACATCATCTACGAGATCTTCGCAGGTGAAGCAAGCCAGATCAGTGCTGCCAATGGTACGGCTGCAAGCCAAGCTGCGTTTAACGCATTGCGCTTGATTGTAACCGTAGGCTGGGCAATTTAC RYIDWLLTVPLQIIEFYLILAAIAVVRAALFWKLMIASIVMLVFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAANGTAASQAAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTATATTGACTGG------------------------CTGCTAACGGTACCGCTGCAAATTATCGAGTTCTATCTGATTCTTGCGGCT---------ATC---GCTGTAGTTCGCGCG---GCTTTG------------------------------------TTCTGGAAG---CTCATGATCGCCTCCATCGTGATGCTGGTCTTCGGCTTCTTGGGCGAA---------CTT------------------GGC------GCG---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCG---TTCGCAATCGGGATGGCTGGCTGGTTGTACATCATCTACGAGATC---------------TTC------GCA---GGTGAAGCAAGCCAGATCAGTGCTGCC------AAT---GGTACGGCTGCAAGC---CAA---GCT---GCG---TTT---AAC---GCATTG---CGCTTGATTGTAACCGTA---------------------------------------------------------------GGCTGG---------GCAATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASIVMLVFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--N-GTAAS-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_EU079225 [unk-Proteo2-Glaciecola] NASB_92_env_samples_EU079225 gi|156106609|gb|EU079225| Uncultured organism clone NASB 92 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 92 putative proteorhodopsin gene, partial cds EU079225 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGATACATTGACTGGCTGCTAACGGTGCCGCTGCAAATTATCGAGTTCTATCTGATTCTTGCGGCTATCGCTGTAGTTCGCGCGGCTTTGTTCTGGAAGCTCATGATCGCCTCCATCGTGATGCTGGTCTTCGGCTTCTTGGGCGAACTTGGCGCGATGAGCTACTGGCCTGCGTTCGCAATCGGGATGGCTGGCTGGTTGTACATCATCTACGAGATCTTCGCAGGTGAAGCAAGCCAGATCAGTGCTGCCAATGGTACGGCTGCAAGCCAAGCTGCGTTTAACGCATTGCGCTTGATTGTGACCGTAGGATGGGCAATTTAT RYIDWLLTVPLQIIEFYLILAAIAVVRAALFWKLMIASIVMLVFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAANGTAASQAAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATTGACTGG------------------------CTGCTAACGGTGCCGCTGCAAATTATCGAGTTCTATCTGATTCTTGCGGCT---------ATC---GCTGTAGTTCGCGCG---GCTTTG------------------------------------TTCTGGAAG---CTCATGATCGCCTCCATCGTGATGCTGGTCTTCGGCTTCTTGGGCGAA---------CTT------------------GGC------GCG---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCG---TTCGCAATCGGGATGGCTGGCTGGTTGTACATCATCTACGAGATC---------------TTC------GCA---GGTGAAGCAAGCCAGATCAGTGCTGCC------AAT---GGTACGGCTGCAAGC---CAA---GCT---GCG---TTT---AAC---GCATTG---CGCTTGATTGTGACCGTA---------------------------------------------------------------GGATGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASIVMLVFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--N-GTAAS-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_EU079211 [unk-Proteo2-Glaciecola] NASB_73_env_samples_EU079211 gi|156106582|gb|EU079211| Uncultured organism clone NASB 73 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 73 putative proteorhodopsin gene, partial cds EU079211 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) unknown (R105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGCTATGTTGATTGGCTGCTAACGGTACCGCTGCGAATTATCGAGTTCTATCTGATTCTTGCGGCTATCGCTGTAGTTCGCGCGGCTTTGTTTTGGAAGCTCATGATCGCCTCCATCGTGATGCTGGTCTTCGGGTTCTTGGGCGAACTTGGCGCGATGAGCTACTGGCCTGCGTTCGCAATCGGGATGGCTGGCTGGTTGTACATCATCTACGAGATCTTCGCAGGTGAAGCAAGCCAGATCAGTGCTGCCAATGGTACGGCTGCAAGCCAAGCTGCGTTTAACGCATTGCGCTTGATTGTGACCGTAGGGTGGGCAATCTAT RYVDWLLTVPLRIIEFYLILAAIAVVRAALFWKLMIASIVMLVFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAANGTAASQAAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTATGTTGATTGG------------------------CTGCTAACGGTACCGCTGCGAATTATCGAGTTCTATCTGATTCTTGCGGCT---------ATC---GCTGTAGTTCGCGCG---GCTTTG------------------------------------TTTTGGAAG---CTCATGATCGCCTCCATCGTGATGCTGGTCTTCGGGTTCTTGGGCGAA---------CTT------------------GGC------GCG---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCG---TTCGCAATCGGGATGGCTGGCTGGTTGTACATCATCTACGAGATC---------------TTC------GCA---GGTGAAGCAAGCCAGATCAGTGCTGCC------AAT---GGTACGGCTGCAAGC---CAA---GCT---GCG---TTT---AAC---GCATTG---CGCTTGATTGTGACCGTA---------------------------------------------------------------GGGTGG---------GCAATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLRIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASIVMLVFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--N-GTAAS-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_EU079212 [unk-Proteo2-Glaciecola] NASB_74_env_samples_EU079212 gi|156106584|gb|EU079212| Uncultured organism clone NASB 74 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 74 putative proteorhodopsin gene, partial cds EU079212 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGCTATGTTGATTGGCTGCTAACGGTACCGCTGCAAATTATCGAGTTCTATCTGATTCTTGCGGCTATCGCTGTAGTTCGCGCGGCTTTGTTCTGGAAGCTCATGATCGCCTCCATCGTGATGCTGGTCTTCGGCTTCTTGGGCGAACTTGGCGCGATGAGCTACTGGCCTGCGTTCGCAATCGGGATGGCTGGCTGGTTGTACATCATCTACGAGATCTTCGCAGGTGAAGCAAGCCAGATCAGTGCTGCCAATGGTACGGCTGCAAGCCAAGCTGCGTTTAACGCATTGCGCTTGATTGTGACCGTAGGGTGGGCAATATAT RYVDWLLTVPLQIIEFYLILAAIAVVRAALFWKLMIASIVMLVFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAANGTAASQAAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTATGTTGATTGG------------------------CTGCTAACGGTACCGCTGCAAATTATCGAGTTCTATCTGATTCTTGCGGCT---------ATC---GCTGTAGTTCGCGCG---GCTTTG------------------------------------TTCTGGAAG---CTCATGATCGCCTCCATCGTGATGCTGGTCTTCGGCTTCTTGGGCGAA---------CTT------------------GGC------GCG---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCG---TTCGCAATCGGGATGGCTGGCTGGTTGTACATCATCTACGAGATC---------------TTC------GCA---GGTGAAGCAAGCCAGATCAGTGCTGCC------AAT---GGTACGGCTGCAAGC---CAA---GCT---GCG---TTT---AAC---GCATTG---CGCTTGATTGTGACCGTA---------------------------------------------------------------GGGTGG---------GCAATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASIVMLVFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--N-GTAAS-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ926107 [unk-Proteo2-Glaciecola] BOUM_OTU020_env_samples gb|KJ926107| Uncultured bacterium clone BOUM OTU020 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU020 putative proteorhodopsin gene, partial cds KJ926107 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 33.709667 32.644667 #na #na #na #na #na GTCGACTGGCTGCTAACGGTACCGCTGCAAATTATCGAGTTCTATCTGATTCTTGCGGCTATCGCTGTAGTTCGCGCGGCTTTGTTCTGGAAGCTCATGATCGCCTCCATCGTGATGCTGGTCTTCGGGTTCTTGGGCGAACTTGGCGCGATGAGCTACTGGCCTGCGTTCGCAATCGGGATGGCTGGCTGGTTGTACATCATCTACGAGATCTTCGCAGGTGAAGCAAGCCAGATCAGTGCTGCCAATGGTACGGCTGCAAGCCAAGCTGCGTTTAACGCATTGCGCTTGATTGTGACCGTAGGGTGGGCAATATAC VDWLLTVPLQIIEFYLILAAIAVVRAALFWKLMIASIVMLVFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAANGTAASQAAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCGACTGG------------------------CTGCTAACGGTACCGCTGCAAATTATCGAGTTCTATCTGATTCTTGCGGCT---------ATC---GCTGTAGTTCGCGCG---GCTTTG------------------------------------TTCTGGAAG---CTCATGATCGCCTCCATCGTGATGCTGGTCTTCGGGTTCTTGGGCGAA---------CTT------------------GGC------GCG---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCG---TTCGCAATCGGGATGGCTGGCTGGTTGTACATCATCTACGAGATC---------------TTC------GCA---GGTGAAGCAAGCCAGATCAGTGCTGCC------AAT---GGTACGGCTGCAAGC---CAA---GCT---GCG---TTT---AAC---GCATTG---CGCTTGATTGTGACCGTA---------------------------------------------------------------GGGTGG---------GCAATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASIVMLVFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--N-GTAAS-Q-A-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_1105101174952 [unk-Proteo2-Glaciecola] JCVI_ORF_1105101174952 jcvi|1105101174952| 1105101174952 JCVI ORF 1105101174952 1105101174952 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 01-mars-04 Coastal/2m_depth/S_34.5_psu/GS035/Wolf_Island/Galapagos_Islands Pacific Ocean marine 1.3891667 -91.81695 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGGATCTGAAAGCAGATGATTACGTTGGAGTGACATTCTGGATCATTTCTGCGGCCATGGTTGCCGCAACCTACTTTTTCACCGTAGAACGCGATCGCGCGGTCGGCAAGTGGAAAACATCATTGACCGTTGCCGCCATGGTGACTGGTATCGCAGCAATTCACTACTTCTATATGAGAGGTGTGTGGGTTAACACCGGCGAAAGCCCCTTGGTTTTCCGATACGTGGACTGGCTTTTGACCGTTCCGTTGCAGATCATCGAGTTCTACTTGATTCTCGCTGCAATCGCGGTAGTTCGGGCTGCTTTGTTCTGGAAGCTTATGATCGCATCCCTTGTGATGTTGGTATTCGGCTTCTTGGGCGAACTCGGTGCGATGAGCTATTGGCCTGCATTCGCCATCGGGATGGCGGGCTGGTTGTACATCATCTACGAAATCTTCGCAGGTGAGGCAAGCCAAATCAGTGCTGCAAACGGCACGGCCGCAAGTCAAACCGCATTCAACGCGTTGCGACTCATTGTAACCGTTGGCTGGGCTATCTACCCAATCGGCTACATTCTCGGGGCCGGTGAAGGTGGCGCTGCTGGCCTAAACTTGATCTACAACTTGGCGGACTTTGTTAATAAGATCGCTTCGGAGTTG MDLKADDYVGVTFWIISAAMVAATYFFTVERDRAVGKWKTSLTVAAMVTGIAAIHYFYMRGVWVNTGESPLVFRYVDWLLTVPLQIIEFYLILAAIAVVRAALFWKLMIASLVMLVFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAANGTAASQTAFNALRLIVTVGWAIYPIGYILGAGEGGAAGLNLIYNLADFVNKIASEL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGATCTGAAAGCAGATGATTACGTTGGAGTGACATTCTGGATCATTTCTGCGGCCATGGTTGCCGCAACCTACTTTTTCACCGTAGAACGCGATCGCGCGGTCGGC---AAGTGGAAAACATCATTGACCGTTGCCGCCATGGTGACTGGTATCGCAGCAATTCACTACTTCTATATGAGAGGTGTGTGGGTT------------------------------AACACC---------------------GGCGAAAGCCCCTTGGTTTTCCGATACGTGGACTGG------------------------CTTTTGACCGTTCCGTTGCAGATCATCGAGTTCTACTTGATTCTCGCTGCA---------ATC---GCGGTAGTTCGGGCT---GCTTTG------------------------------------TTCTGGAAG---CTTATGATCGCATCCCTTGTGATGTTGGTATTCGGCTTCTTGGGCGAA---------CTC------------------GGT------GCG---------------------------------ATG------------------------------------------------------------------AGCTAT------------------TGGCCTGCA---TTCGCCATCGGGATGGCGGGCTGGTTGTACATCATCTACGAAATC---------------TTC------GCA---GGTGAGGCAAGCCAAATCAGTGCTGCA------AAC---GGCACGGCCGCAAGT---CAA---ACC---GCA---TTC---AAC---GCGTTG---CGACTCATTGTAACCGTT---------------------------------------------------------------GGCTGG---------GCTATCTACCCAATCGGCTACATTCTCGGGGCCGGTGAA---GGTGGC---------------------------------GCT---------GCTGGCCTAAACTTGATCTACAACTTGGCGGACTTTGTTAATAAGATCGCTTCGGAGTTG--------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------MDLKADDYVGVTFWIISAAMVAATYFFTVERDRAVG-KWKTSLTVAAMVTGIAAIHYFYMRGVWV----------NT-------GESPLVFRYVDW--------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLVFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--N-GTAAS-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYPIGYILGAGE-GG-----------A---AGLNLIYNLADFVNKIASEL--------------------------------------------------- [unk-Proteo2-Glaciecola]_FJ862915 [unk-Proteo2-Glaciecola] 03_env_samples_FJ862915 gi|226897374|gb|FJ862915| Uncultured bacterium clone 03 putative proteorhodopsin gene, partial cds Uncultured bacterium clone 03 putative proteorhodopsin gene, partial cds FJ862915 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 07-Dec-2009 #na coastal_seawater Atlantic Ocean marine 38.8489 -75.1076 Lightdependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTAGATTGGCTACTGACCGTGCCACTGCAGATTGTAGAGTTCTACCTGATTCTTGCGGCAATCGCAGTCGTGCGCGCAGCACTTTTCTGGAAGCTAATGATAGCGTCACTTGTGATGCTAATCTTTGGCTATTTGGGAGAAGTGGGCGCAATGGACTACTGGATAGCGTTCATCATCGGTATGGCTGGTTGGTTGTACATCATCTATGAAATATTCATTGGTGAAGCTAGCCAAATCAGCGCGTCCCAAGGAACAGTAGCAAGCCAAACAGCTTTCAACGCATTGCGTTTGATTGTGACTGTAGGGTGGGCAATATACGCTCGA VDWLLTVPLQIVEFYLILAAIAVVRAALFWKLMIASLVMLIFGYLGEVGAMDYWIAFIIGMAGWLYIIYEIFIGEASQISASQGTVASQTAFNALRLIVTVGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGATTGG------------------------CTACTGACCGTGCCACTGCAGATTGTAGAGTTCTACCTGATTCTTGCGGCA---------ATC---GCAGTCGTGCGCGCA---GCACTT------------------------------------TTCTGGAAG---CTAATGATAGCGTCACTTGTGATGCTAATCTTTGGCTATTTGGGAGAA---------GTG------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------GACTAC------------------TGGATAGCG---TTCATCATCGGTATGGCTGGTTGGTTGTACATCATCTATGAAATA---------------TTC------ATT---GGTGAAGCTAGCCAAATCAGCGCGTCC------CAA---GGAACAGTAGCAAGC---CAA---ACA---GCT---TTC---AAC---GCATTG---CGTTTGATTGTGACTGTA---------------------------------------------------------------GGGTGG---------GCAATATACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLIFGYLGE---V------G--A-----------M----------------------DY------WIA-FIIGMAGWLYIIYEI-----F--I-GEASQISAS--Q-GTVAS-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_FJ862916 [unk-Proteo2-Glaciecola] 04_env_samples_FJ862916 gi|226897376|gb|FJ862916| Uncultured bacterium clone 04 putative proteorhodopsin gene, partial cds Uncultured bacterium clone 04 putative proteorhodopsin gene, partial cds FJ862916 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 07-Dec-2009 #na coastal_seawater Atlantic Ocean marine 38.8489 -75.1076 Lightdependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTAGATTGGCTACTGACCGTGCCACTGCAGATTGTAGAGTTCTACCTGATTCTTGCGGCAATCGCAGTCGTGCGTGCAGCACTTTTCTGGAAGCTAATGATAGCGTCACTTGTGATGCTAATCTTTGGCTATTTGGGAGAAGTGGGCGCAATGGACTATTGGATAGCGTTCATCATCGGTATGGCTGGTTGGTTGTACATCATCTATGAAATATTCATTGGTGAAGCTAGCCAAATCAGCGCGTCCCAAGGAACAGTAGCAAGCCAAACAGCTTTCAACGCATTGCGTTTGATTGTGACTGTAGGGTGGGCAATATACGCTCGA VDWLLTVPLQIVEFYLILAAIAVVRAALFWKLMIASLVMLIFGYLGEVGAMDYWIAFIIGMAGWLYIIYEIFIGEASQISASQGTVASQTAFNALRLIVTVGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGATTGG------------------------CTACTGACCGTGCCACTGCAGATTGTAGAGTTCTACCTGATTCTTGCGGCA---------ATC---GCAGTCGTGCGTGCA---GCACTT------------------------------------TTCTGGAAG---CTAATGATAGCGTCACTTGTGATGCTAATCTTTGGCTATTTGGGAGAA---------GTG------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------GACTAT------------------TGGATAGCG---TTCATCATCGGTATGGCTGGTTGGTTGTACATCATCTATGAAATA---------------TTC------ATT---GGTGAAGCTAGCCAAATCAGCGCGTCC------CAA---GGAACAGTAGCAAGC---CAA---ACA---GCT---TTC---AAC---GCATTG---CGTTTGATTGTGACTGTA---------------------------------------------------------------GGGTGG---------GCAATATACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLIFGYLGE---V------G--A-----------M----------------------DY------WIA-FIIGMAGWLYIIYEI-----F--I-GEASQISAS--Q-GTVAS-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_FJ862914 [unk-Proteo2-Glaciecola] 02_env_samples_FJ862914 gi|226897372|gb|FJ862914| Uncultured bacterium clone 02 putative proteorhodopsin gene, partial cds Uncultured bacterium clone 02 putative proteorhodopsin gene, partial cds FJ862914 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 07-Dec-2009 #na coastal_seawater Atlantic Ocean marine 38.8489 -75.1076 Lightdependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTCGATTGGCTACTGACCGTGCCACTGCAGATTGTAGAGTTCTACCTGATTCTTGCGGCAATCGCAGTCGTGCGCGCAGCACTTTTCTGGAAGCTAATGATAGCGTCACTTGTGATGCTGATCTTTGGCTATTTGGGAGAAGTGGGCGCAATGGACTACTGGACAGCGTTCATCATCGGTATGGCTGGTTGGTTGTACATCATCTATGAAATATTCATTGGTGAAGCTAGCCAAATCAGCGCGTCCCAAGGAACAGTAGCAAGCCAAACAGCTTTCAACGCATTGCGTTTGATTGTGACTGTAGGATGGGCCATCTATGCTCGA VDWLLTVPLQIVEFYLILAAIAVVRAALFWKLMIASLVMLIFGYLGEVGAMDYWTAFIIGMAGWLYIIYEIFIGEASQISASQGTVASQTAFNALRLIVTVGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCGATTGG------------------------CTACTGACCGTGCCACTGCAGATTGTAGAGTTCTACCTGATTCTTGCGGCA---------ATC---GCAGTCGTGCGCGCA---GCACTT------------------------------------TTCTGGAAG---CTAATGATAGCGTCACTTGTGATGCTGATCTTTGGCTATTTGGGAGAA---------GTG------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------GACTAC------------------TGGACAGCG---TTCATCATCGGTATGGCTGGTTGGTTGTACATCATCTATGAAATA---------------TTC------ATT---GGTGAAGCTAGCCAAATCAGCGCGTCC------CAA---GGAACAGTAGCAAGC---CAA---ACA---GCT---TTC---AAC---GCATTG---CGTTTGATTGTGACTGTA---------------------------------------------------------------GGATGG---------GCCATCTATGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLIFGYLGE---V------G--A-----------M----------------------DY------WTA-FIIGMAGWLYIIYEI-----F--I-GEASQISAS--Q-GTVAS-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_EU795105 [unk-Proteo2-Glaciecola] ARCTIC14_B_11_genomic_EU795105 gi|193084534|gb|EU795105| Uncultured bacterium ARCTIC14 B 11 genomic sequence Uncultured bacterium ARCTIC14 B 11 genomic sequence EU795105 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:542404 genomic_DNA other 02-juil-08 #na Arctic Arctic Ocean marine 71.4 -156.8 Direct Submission Henn,M.R., Young,S., Jaffe,D.B., Gnerre,S., Berlin,A., Heiman,D., Hepburn,T., Sykes,S., Kirchman,D.L., Cottrell,M.T., Lander,E., Nusbaum,C. and Birren,B. Submitted (21MAY2008) Broad Institute of MIT and Harvard, 320 Charles Street, Cambridge, MA 02141, USA #na #na AATAAGGAGAGGATATTGTTAGACCCTAAAGATTATGTAGGCGTCACTTTCTGGATTATTTCTGCAGCCATGGTTGCAGCAACTTACTTTTTCACTGTTGAACGCGACAGAGCTGTAGGCAAGTGGAAGACATCCCTAACCGTCGCCGCAATGGTGACTGGTATCGCAGCAATTCATTACTTCTACATGCGCGGAGTGTGGGTTGAAACGGGCCAAAGCCCAACCGTTTTCCGCTACGTAGATTGGCTACTGACCGTGCCACTGCAGATTGTGGAGTTCTACCTGATTCTTGCGGCAATCGCAGTCGTACGCGCAGCACTTTTCTGGAAGCTAATGATAGCGTCACTTGTGATGCTGATCTTTGGCTATTTGGGAGAAGTGGGCGCAATGGACTACTGGATAGCGTTCATCATCGGTATGGCTGGTTGGTTGTACATCATCTATGAAATATTCATTGGTGAAGCTAGCCAAATCAGCGCGTCCCAAGGAACAGTAGCAAGCCAAACAGCTTTCAACGCATTGCGTTTGATTGTGACTGTAGGTTGGGCTATCTACCCTATCGGTTACGTTCTGGGTGGCGGTCCTGATGGTGCAGCTGGACTGAACATTGTCTACAACCTTGCAGACTTTGTTAACAAGATCGCATTTGGTGTTGTGATCTGGGCAGCGGCGACATCCTCGTCTGAAAATGCC NKERILLDPKDYVGVTFWIISAAMVAATYFFTVERDRAVGKWKTSLTVAAMVTGIAAIHYFYMRGVWVETGQSPTVFRYVDWLLTVPLQIVEFYLILAAIAVVRAALFWKLMIASLVMLIFGYLGEVGAMDYWIAFIIGMAGWLYIIYEIFIGEASQISASQGTVASQTAFNALRLIVTVGWAIYPIGYVLGGGPDGAAGLNIVYNLADFVNKIAFGVVIWAAATSSSENA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAAGGAGAGGATATTGTTAGACCCTAAAGATTATGTAGGCGTCACTTTCTGGATTATTTCTGCAGCCATGGTTGCAGCAACTTACTTTTTCACTGTTGAACGCGACAGAGCTGTAGGC---AAGTGGAAGACATCCCTAACCGTCGCCGCAATGGTGACTGGTATCGCAGCAATTCATTACTTCTACATGCGCGGAGTGTGGGTT------------------------------GAAACG---------------------GGCCAAAGCCCAACCGTTTTCCGCTACGTAGATTGG------------------------CTACTGACCGTGCCACTGCAGATTGTGGAGTTCTACCTGATTCTTGCGGCA---------ATC---GCAGTCGTACGCGCA---GCACTT------------------------------------TTCTGGAAG---CTAATGATAGCGTCACTTGTGATGCTGATCTTTGGCTATTTGGGAGAA---------GTG------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------GACTAC------------------TGGATAGCG---TTCATCATCGGTATGGCTGGTTGGTTGTACATCATCTATGAAATA---------------TTC------ATT---GGTGAAGCTAGCCAAATCAGCGCGTCC------CAA---GGAACAGTAGCAAGC---CAA---ACA---GCT---TTC---AAC---GCATTG---CGTTTGATTGTGACTGTA---------------------------------------------------------------GGTTGG---------GCTATCTACCCTATCGGTTACGTTCTGGGTGGCGGTCCT---GATGGT---------------------------------GCA---------GCTGGACTGAACATTGTCTACAACCTTGCAGACTTTGTTAACAAGATCGCATTTGGTGTTGTGATCTGGGCAGCGGCGACATCCTCG---TCTGAAAATGCC--------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------NKERILLDPKDYVGVTFWIISAAMVAATYFFTVERDRAVG-KWKTSLTVAAMVTGIAAIHYFYMRGVWV----------ET-------GQSPTVFRYVDW--------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLIFGYLGE---V------G--A-----------M----------------------DY------WIA-FIIGMAGWLYIIYEI-----F--I-GEASQISAS--Q-GTVAS-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYPIGYVLGGGP-DG-----------A---AGLNIVYNLADFVNKIAFGVVIWAAATSS-SENA------------------------------------- [unk-Proteo2-Glaciecola]_JX863163 [unk-Proteo2-Glaciecola] MALINA_OTU10_376_Q_env_samples_JX863163 gi|425477276|gb|JX863163| Uncultured bacterium clone MALINA OTU10 376 Q putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU10 376 Q putative proteorhodopsin gene, partial cds JX863163 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 08-juil-09 0m_depth Pacific Ocean marine 53.36 -159.29 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTACTGACCGTGCCACTACAGATTGTGGAGTTCTACCTGATTCTTGCGGCAATCGCAGTAGTGCGCGCAGCACTTTTCTGGAAGCTAATGATAGCGTCACTTGTGATGCTGATCTTTGGCTATTTGGGAGAAGTGGGCGCAATGGACTACTGGATAGCGTTCATAATCGGTATGGCTGGTTGGTTGTACATCATCTATGAAATATTCATTGGTGAAGCTAGCCAAATCAGCGCGTCCCAAGGAACAGTAGCAAGCCAAACAGCTTTCAACGCATTGCGTTTGATTGTGACTGTA WLLTVPLQIVEFYLILAAIAVVRAALFWKLMIASLVMLIFGYLGEVGAMDYWIAFIIGMAGWLYIIYEIFIGEASQISASQGTVASQTAFNALRLIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTACTGACCGTGCCACTACAGATTGTGGAGTTCTACCTGATTCTTGCGGCA---------ATC---GCAGTAGTGCGCGCA---GCACTT------------------------------------TTCTGGAAG---CTAATGATAGCGTCACTTGTGATGCTGATCTTTGGCTATTTGGGAGAA---------GTG------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------GACTAC------------------TGGATAGCG---TTCATAATCGGTATGGCTGGTTGGTTGTACATCATCTATGAAATA---------------TTC------ATT---GGTGAAGCTAGCCAAATCAGCGCGTCC------CAA---GGAACAGTAGCAAGC---CAA---ACA---GCT---TTC---AAC---GCATTG---CGTTTGATTGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLIFGYLGE---V------G--A-----------M----------------------DY------WIA-FIIGMAGWLYIIYEI-----F--I-GEASQISAS--Q-GTVAS-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_1105109409722 [unk-Proteo2-Glaciecola] JCVI_ORF_1105109409722_GS002_Coastal_1m jcvi|1105109409722| 1105109409722 JCVI ORF 1105109409722 1105109409722 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 21-AUG-2003 Coastal/1m_depth/S_29.2_psu/GS002/Gulf_of_Maine/North_American_East_Coast Atlantic Ocean marine 42.503056 -67.24 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGTTAGACCCGAACGATTATGTAGGCGTCACTTTCTGGATTATTTCTGCGGCCATGGTTGCCGCCACTTACTTTTTCACAGTCGAACGCGATCGCGCGGTAGGCAAGTGGAAGACTTCCCTGACCGTAGCCGCCATGGTGACCGGTATCGCAGCGATTCACTATTTCTACATGCGTGGAGTGTGGATCGAAACCAATGCTAGCCCAACTGTATTCCGATACGTTGACTGGCTACTTACTGTGCCCCTGCAAATTGTCGAGTTTTACTTGATTCTTGCCGCCATCGCAGTCGTTCGTGCAGCTCTGTTCTGGAAGCTACTGATTGCATCACTCGTGATGTTGATCTTCGGCTACTTGGGCGAAGTTGGCGCAATGGATTACTGGATCGCCTTTGCCATTGGTATGGCCGGATGGTTGTACATCATCTACGAAATTTTCGTGGGTGAAGCGAGCCAGATCAGCGCGTCCCAAGGAACCGCTGCGAGCCAGACCGCGTTTAACGCTCTGCGTTTGATCGTCACCGTTGGTTGGGCAATTTACCCAATCGGTTACGTTCTTGGTGCAGGCAGCGAAGGCGCTGCAGGCCTAAACATCGTTTACAACCTTGCTGACTTTGTTAACAAGATTGCCTTCGGTGTTGTGATCTGGACTGCTGCTACGTCCTCTCAGAGAGCGCGTAACAGATCACGCCACCGT MLDPNDYVGVTFWIISAAMVAATYFFTVERDRAVGKWKTSLTVAAMVTGIAAIHYFYMRGVWIETNASPTVFRYVDWLLTVPLQIVEFYLILAAIAVVRAALFWKLLIASLVMLIFGYLGEVGAMDYWIAFAIGMAGWLYIIYEIFVGEASQISASQGTAASQTAFNALRLIVTVGWAIYPIGYVLGAGSEGAAGLNIVYNLADFVNKIAFGVVIWTAATSSQRARNRSRHR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTTAGACCCGAACGATTATGTAGGCGTCACTTTCTGGATTATTTCTGCGGCCATGGTTGCCGCCACTTACTTTTTCACAGTCGAACGCGATCGCGCGGTAGGC---AAGTGGAAGACTTCCCTGACCGTAGCCGCCATGGTGACCGGTATCGCAGCGATTCACTATTTCTACATGCGTGGAGTGTGGATC------------------------------GAAACC---------------------AATGCTAGCCCAACTGTATTCCGATACGTTGACTGG------------------------CTACTTACTGTGCCCCTGCAAATTGTCGAGTTTTACTTGATTCTTGCCGCC---------ATC---GCAGTCGTTCGTGCA---GCTCTG------------------------------------TTCTGGAAG---CTACTGATTGCATCACTCGTGATGTTGATCTTCGGCTACTTGGGCGAA---------GTT------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------GATTAC------------------TGGATCGCC---TTTGCCATTGGTATGGCCGGATGGTTGTACATCATCTACGAAATT---------------TTC------GTG---GGTGAAGCGAGCCAGATCAGCGCGTCC------CAA---GGAACCGCTGCGAGC---CAG---ACC---GCG---TTT---AAC---GCTCTG---CGTTTGATCGTCACCGTT---------------------------------------------------------------GGTTGG---------GCAATTTACCCAATCGGTTACGTTCTTGGTGCAGGCAGC---GAAGGC---------------------------------GCT---------GCAGGCCTAAACATCGTTTACAACCTTGCTGACTTTGTTAACAAGATTGCCTTCGGTGTTGTGATCTGGACTGCTGCTACGTCCTCT---CAGAGAGCGCGTAACAGATCACGCCAC---------------------CGT------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------MLDPNDYVGVTFWIISAAMVAATYFFTVERDRAVG-KWKTSLTVAAMVTGIAAIHYFYMRGVWI----------ET-------NASPTVFRYVDW--------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LLIASLVMLIFGYLGE---V------G--A-----------M----------------------DY------WIA-FAIGMAGWLYIIYEI-----F--V-GEASQISAS--Q-GTAAS-Q-T-A-F-N-AL-RLIVTV---------------------GW---AIYPIGYVLGAGS-EG-----------A---AGLNIVYNLADFVNKIAFGVVIWTAATSS-QRARNRSRH-------R------------------------ [unk-Proteo2-Glaciecola]_JX863250 [unk-Proteo2-Glaciecola] MALINA_OTU10_162_Q_env_samples_JX863250 gi|425477450|gb|JX863250| Uncultured bacterium clone MALINA OTU10 162 Q putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU10 162 Q putative proteorhodopsin mRNA, partial cds JX863250 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 08Aug2009 3m_depth Arctic Ocean marine 70.8 -133.73 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTACTGACTGTGCCACTGCAGATTGTCGAGTTCTACTTGATTCTTGCAGCGATCGCTGTGGTTCGGGCTGCTCTTTTCTGGAAGCTACTGATTGCGTCTCTCGTGATGCTAATCTTTGGTTATCTTGGAGAAGTCGGTGCGATGGACTATTGGGTAGCGTTCATCATAGGTATGGCCGGTTGGTTGTATATCATCTATGAGATCTTCATTGGTGAAGCAAGCCAAATAAGCGCATCCCAAGGCACTGCTGCTAGCCAAACCGCTTTTAACGCACTAAGAATAATCGTAACTGTA WLLTVPLQIVEFYLILAAIAVVRAALFWKLLIASLVMLIFGYLGEVGAMDYWVAFIIGMAGWLYIIYEIFIGEASQISASQGTAASQTAFNALRIIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTACTGACTGTGCCACTGCAGATTGTCGAGTTCTACTTGATTCTTGCAGCG---------ATC---GCTGTGGTTCGGGCT---GCTCTT------------------------------------TTCTGGAAG---CTACTGATTGCGTCTCTCGTGATGCTAATCTTTGGTTATCTTGGAGAA---------GTC------------------GGT------GCG---------------------------------ATG------------------------------------------------------------------GACTAT------------------TGGGTAGCG---TTCATCATAGGTATGGCCGGTTGGTTGTATATCATCTATGAGATC---------------TTC------ATT---GGTGAAGCAAGCCAAATAAGCGCATCC------CAA---GGCACTGCTGCTAGC---CAA---ACC---GCT---TTT---AAC---GCACTA---AGAATAATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LLIASLVMLIFGYLGE---V------G--A-----------M----------------------DY------WVA-FIIGMAGWLYIIYEI-----F--I-GEASQISAS--Q-GTAAS-Q-T-A-F-N-AL-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_JX863164 [unk-Proteo2-Glaciecola] MALINA_OTU10_378_Q_env_samples_JX863164 gi|425477278|gb|JX863164| Uncultured bacterium clone MALINA OTU10 378 Q putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU10 378 Q putative proteorhodopsin gene, partial cds JX863164 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 08-juil-09 0m_depth Pacific Ocean marine 53.36 -159.29 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTACTGACTGTGCCACTGCAGATTGTCGAGTTCTACTTGATTCTTGCAGCGATCGCTGTGGTTCGGGCTGCTCTTTTCTGGAAGCTACTGATTGCGTCTCTCGTGATGCTAATCTTTGGTTATCTTGGAGAAGTCGGTGCGATGGACTATTGGGTAGCGTTCACCATAGGTATGGCCGGTTGGTTGTATATCATCTATGAGATCTTCATTGGTGAAGCAAGCCGAATAAGCGCATCCCAAGGCACTGCTGCTAGCCAAACCGCTTTTAACGCACTAAGAATAATCGTAACTGTA WLLTVPLQIVEFYLILAAIAVVRAALFWKLLIASLVMLIFGYLGEVGAMDYWVAFTIGMAGWLYIIYEIFIGEASRISASQGTAASQTAFNALRIIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTACTGACTGTGCCACTGCAGATTGTCGAGTTCTACTTGATTCTTGCAGCG---------ATC---GCTGTGGTTCGGGCT---GCTCTT------------------------------------TTCTGGAAG---CTACTGATTGCGTCTCTCGTGATGCTAATCTTTGGTTATCTTGGAGAA---------GTC------------------GGT------GCG---------------------------------ATG------------------------------------------------------------------GACTAT------------------TGGGTAGCG---TTCACCATAGGTATGGCCGGTTGGTTGTATATCATCTATGAGATC---------------TTC------ATT---GGTGAAGCAAGCCGAATAAGCGCATCC------CAA---GGCACTGCTGCTAGC---CAA---ACC---GCT---TTT---AAC---GCACTA---AGAATAATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LLIASLVMLIFGYLGE---V------G--A-----------M----------------------DY------WVA-FTIGMAGWLYIIYEI-----F--I-GEASRISAS--Q-GTAAS-Q-T-A-F-N-AL-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_JX863161 [unk-Proteo2-Glaciecola] MALINA_OTU10_056_Q_env_samples_JX863161 gi|425477272|gb|JX863161| Uncultured bacterium clone MALINA OTU10 056 Q putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU10 056 Q putative proteorhodopsin gene, partial cds JX863161 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 08Aug2009 70m_depth Arctic Ocean marine 70.8 -133.73 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTACTGACTGTGCCACTGCAGATTGTCGAGTTCTACTTGATTCTTGCAGCGATCGCTGTGGTTCGGGCTGCTCTTTTCTGGAAGCTACTGATTGCGTCTCTCGTGATGCTAATCTTTGGTTATCTTGGAGAAGTCGGTGCGATGGACCATTGGGTAGCGTTCATCATAGGTATGGCCGGTTGGTTGTATATCATCTATGAGATCTTCATTGGTGAAGCAAGCCAAATAAGCGCATCCCAAGGCACTGCTGCTAGCCAAACCGCTTTTAGCGCACTAAGAATAATCGTAACTGTA WLLTVPLQIVEFYLILAAIAVVRAALFWKLLIASLVMLIFGYLGEVGAMDHWVAFIIGMAGWLYIIYEIFIGEASQISASQGTAASQTAFSALRIIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTACTGACTGTGCCACTGCAGATTGTCGAGTTCTACTTGATTCTTGCAGCG---------ATC---GCTGTGGTTCGGGCT---GCTCTT------------------------------------TTCTGGAAG---CTACTGATTGCGTCTCTCGTGATGCTAATCTTTGGTTATCTTGGAGAA---------GTC------------------GGT------GCG---------------------------------ATG------------------------------------------------------------------GACCAT------------------TGGGTAGCG---TTCATCATAGGTATGGCCGGTTGGTTGTATATCATCTATGAGATC---------------TTC------ATT---GGTGAAGCAAGCCAAATAAGCGCATCC------CAA---GGCACTGCTGCTAGC---CAA---ACC---GCT---TTT---AGC---GCACTA---AGAATAATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LLIASLVMLIFGYLGE---V------G--A-----------M----------------------DH------WVA-FIIGMAGWLYIIYEI-----F--I-GEASQISAS--Q-GTAAS-Q-T-A-F-S-AL-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_JX863252 [unk-Proteo2-Glaciecola] MALINA_OTU10_110_Q_env_samples_JX863252 gi|425477454|gb|JX863252| Uncultured bacterium clone MALINA OTU10 110 Q putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU10 110 Q putative proteorhodopsin mRNA, partial cds JX863252 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 09Aug2009 3m_depth Arctic Ocean marine 71.57 -133.94 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTACTGACTGTGCCACTGCAGATTGTCGAGTTCTACTTGATTCTTGCAGCTATCGCTGTGGTTCGGGCTGCTCTTTTCTGGAAGCTACTGATTGCGTCTCTCGTGATGCTAATCTTCGGTTATCTTGGAGAAGTCGGTGCGATGGACTACTGGGTCGCGCTCATCATAGGTATGGCCGGTTGGTTGTATATCATCTATGAGATCTTCATTGGTGAAGCAAGCCAAATAAGCGCATCCCAAGGCACTGCTGCCAGCCAAACGGCTTTTAACGCACTAAGAATAATCGTAACTGTA WLLTVPLQIVEFYLILAAIAVVRAALFWKLLIASLVMLIFGYLGEVGAMDYWVALIIGMAGWLYIIYEIFIGEASQISASQGTAASQTAFNALRIIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTACTGACTGTGCCACTGCAGATTGTCGAGTTCTACTTGATTCTTGCAGCT---------ATC---GCTGTGGTTCGGGCT---GCTCTT------------------------------------TTCTGGAAG---CTACTGATTGCGTCTCTCGTGATGCTAATCTTCGGTTATCTTGGAGAA---------GTC------------------GGT------GCG---------------------------------ATG------------------------------------------------------------------GACTAC------------------TGGGTCGCG---CTCATCATAGGTATGGCCGGTTGGTTGTATATCATCTATGAGATC---------------TTC------ATT---GGTGAAGCAAGCCAAATAAGCGCATCC------CAA---GGCACTGCTGCCAGC---CAA---ACG---GCT---TTT---AAC---GCACTA---AGAATAATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LLIASLVMLIFGYLGE---V------G--A-----------M----------------------DY------WVA-LIIGMAGWLYIIYEI-----F--I-GEASQISAS--Q-GTAAS-Q-T-A-F-N-AL-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_JX863162 [unk-Proteo2-Glaciecola] MALINA_OTU10_239_Q_env_samples_JX863162 gi|425477274|gb|JX863162| Uncultured bacterium clone MALINA OTU10 239 Q putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU10 239 Q putative proteorhodopsin gene, partial cds JX863162 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 11Aug2009 3m_depth Arctic Ocean marine 70.68 -139.62 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTACTGACTGTGCCACTGCAGATTGTCGAGTTCTACTTGATTCTTGCAGCTATCGCTGTGGTTCGGGCTGCTCTTTTCTGGAAGCTACTGATTGTGTCTCTCGTGATGCTAATCTTCGGTTGTCTTGGAGAAGTCGGTGCGATGGACTACTGGGTCGCGTTCATCATAGGTATGGCCGGTTGGTTGTATATCATCTATGAGATCTTCATTGGTGAAGCAAGCCAAATAAGCGCATCCCAAGGCACTGCTGCCAGCCAAACGGCTTTTAACGCACTAAGAATAATCGTAACTGTA WLLTVPLQIVEFYLILAAIAVVRAALFWKLLIVSLVMLIFGCLGEVGAMDYWVAFIIGMAGWLYIIYEIFIGEASQISASQGTAASQTAFNALRIIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTACTGACTGTGCCACTGCAGATTGTCGAGTTCTACTTGATTCTTGCAGCT---------ATC---GCTGTGGTTCGGGCT---GCTCTT------------------------------------TTCTGGAAG---CTACTGATTGTGTCTCTCGTGATGCTAATCTTCGGTTGTCTTGGAGAA---------GTC------------------GGT------GCG---------------------------------ATG------------------------------------------------------------------GACTAC------------------TGGGTCGCG---TTCATCATAGGTATGGCCGGTTGGTTGTATATCATCTATGAGATC---------------TTC------ATT---GGTGAAGCAAGCCAAATAAGCGCATCC------CAA---GGCACTGCTGCCAGC---CAA---ACG---GCT---TTT---AAC---GCACTA---AGAATAATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LLIVSLVMLIFGCLGE---V------G--A-----------M----------------------DY------WVA-FIIGMAGWLYIIYEI-----F--I-GEASQISAS--Q-GTAAS-Q-T-A-F-N-AL-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_JX863251 [unk-Proteo2-Glaciecola] MALINA_OTU10_101_Q_env_samples_JX863251 gi|425477452|gb|JX863251| Uncultured bacterium clone MALINA OTU10 101 Q putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU10 101 Q putative proteorhodopsin mRNA, partial cds JX863251 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 09Aug2009 3m_depth Arctic Ocean marine 71.57 -133.94 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTACTGACTGTGCCACTGCAGATTGTCGAGTTCTACTTGATTCTTGCAGCTATCGCTGTGGTTCGGGCTGCTCTTTTCTGGAGGCTACTGATTGCGTCTCTCGTGATGCTAATCTTCGGTTATCTTGGAGAAGTCGGTGCGATGGACTACTGGGTCGCGTTCATCATAGGTATGGCCGGTTGGTTGTATATCATCTATGAGATCTTCATTGGTGAAGCAAGCCAAATAAGCGCATCCCAAGGCACTGCTGCCAGCCAAACGGCTTTTAACGCACTAAGAATAATCGTAACTGTA WLLTVPLQIVEFYLILAAIAVVRAALFWRLLIASLVMLIFGYLGEVGAMDYWVAFIIGMAGWLYIIYEIFIGEASQISASQGTAASQTAFNALRIIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTACTGACTGTGCCACTGCAGATTGTCGAGTTCTACTTGATTCTTGCAGCT---------ATC---GCTGTGGTTCGGGCT---GCTCTT------------------------------------TTCTGGAGG---CTACTGATTGCGTCTCTCGTGATGCTAATCTTCGGTTATCTTGGAGAA---------GTC------------------GGT------GCG---------------------------------ATG------------------------------------------------------------------GACTAC------------------TGGGTCGCG---TTCATCATAGGTATGGCCGGTTGGTTGTATATCATCTATGAGATC---------------TTC------ATT---GGTGAAGCAAGCCAAATAAGCGCATCC------CAA---GGCACTGCTGCCAGC---CAA---ACG---GCT---TTT---AAC---GCACTA---AGAATAATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWR-LLIASLVMLIFGYLGE---V------G--A-----------M----------------------DY------WVA-FIIGMAGWLYIIYEI-----F--I-GEASQISAS--Q-GTAAS-Q-T-A-F-N-AL-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_FJ618948 [unk-Proteo2-Glaciecola] PR_108_08_04_env_samples_FJ618948 gi|223046779|gb|FJ618948| Uncultured bacterium clone PR 108 08 04 proteorhodopsin gene, partial cds Uncultured bacterium clone PR 108 08 04 proteorhodopsin gene, partial cds FJ618948 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-juil-09 #na Arctic_Ocean Arctic Ocean marine 71.37 -156.68 Photoheterotrophic microbes in the Arctic Ocean in summer and winter Cottrell,M.T. and Kirchman,D.L. Appl. Environ. Microbiol. 75 (15), 49584966 (2009) 19502441 #na TACGTTGATTGGTTATTGACTGTGCCGCTGCAGATTGTCGAGTTCTACTTGATTCTTGCTGCTATAGCTGTGGTTCGTGCTGCTTTGTTCTGGAAGCTACTGATTGCATCGGTTGTAATGCTAGTCGGCGGATATCTTGGAGAAATCGAAGCTATGCCTTACTGGACAGCATTCGGGATCGGTATGGCTGGTTGGTTGTACATCATCTATGAAGTATTCGTCGGTGAAGCTAGCCAAATCAGCGCATCTCAGGGTACTGAGGCAAGCAAAATCGCCTTCAACGCACTACGCTTGATTGTGACCGTTGGCTGGGCAATCTAC YVDWLLTVPLQIVEFYLILAAIAVVRAALFWKLLIASVVMLVGGYLGEIEAMPYWTAFGIGMAGWLYIIYEVFVGEASQISASQGTEASKIAFNALRLIVTVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACGTTGATTGG------------------------TTATTGACTGTGCCGCTGCAGATTGTCGAGTTCTACTTGATTCTTGCTGCT---------ATA---GCTGTGGTTCGTGCT---GCTTTG------------------------------------TTCTGGAAG---CTACTGATTGCATCGGTTGTAATGCTAGTCGGCGGATATCTTGGAGAA---------ATC------------------GAA------GCT---------------------------------ATG------------------------------------------------------------------CCTTAC------------------TGGACAGCA---TTCGGGATCGGTATGGCTGGTTGGTTGTACATCATCTATGAAGTA---------------TTC------GTC---GGTGAAGCTAGCCAAATCAGCGCATCT------CAG---GGTACTGAGGCAAGC---AAA---ATC---GCC---TTC---AAC---GCACTA---CGCTTGATTGTGACCGTT---------------------------------------------------------------GGCTGG---------GCAATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LLIASVVMLVGGYLGE---I------E--A-----------M----------------------PY------WTA-FGIGMAGWLYIIYEV-----F--V-GEASQISAS--Q-GTEAS-K-I-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_1105093826642 [unk-Proteo2-Glaciecola] JCVI_ORF_1105093826642_GS008_Coastal_1m jcvi|1105093826642| 1105093826642 JCVI ORF 1105093826642 1105093826642 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 16-nov-03 Coastal/1m_depth/S_26.5_psu/GS008/Newport_Harbor/RI/North_American_East_Coast Atlantic Ocean marine 41.485832 -71.35111 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGGAAACGACAGGTTTAAATCCTAGTGATTATACAGGAGTCAGTTTCTGGATTATATCCGCAGCAATGGTTGCGGCAACTTACTTTTTCACTGTTGAACGCGATCGCGCAGAAGGCAAGTGGAAAACATCTTTAACCGTTGCGGCGATGGTAACTGGTATTGCAGCGATTCACTATTTCTACATGCGAGGGGTTTGGGTATCAACAGGTGCAAGCCCGACAGTCTTCCGCTATGTCGATTGGTTGTTAACTGTACCACTGCAGATTGTCGAGTTTTTCTTGATTCTTTCTGCTATAGCTGTAGTTCGTGCTGCTTTATTCTGGAAGCTGTTAATTGCATCCGTTGTGATGCTAGTTGGCGGATATCTCGGTGAAGTTGGAGCTATGTCCTATTGGCCAGCATTCGCAATTGGTATGGCTGGTTGGATATACATCATCTACGAAATCTTCGTTGGTGAAGCTAGTCAAATCAGCGCAGCCCAAGGTACTGAAGCAAGTAAAACTGCCTTCAATGCACTGCGTTTAATTGTAACTGTTGGGTGGTCAATCTATCCCATAGGTTATATCGTAGGTGCTGGTGCAGGTGGTGATGCTGCATCTAACCTCAACCTTGTATACAACCTTGCAGACTTCGTTAACAAGATTGCATTCGGTGTTGTTATTTGGGTAGCAGCTACATCTTCGTCTAAGGCT METTGLNPSDYTGVSFWIISAAMVAATYFFTVERDRAEGKWKTSLTVAAMVTGIAAIHYFYMRGVWVSTGASPTVFRYVDWLLTVPLQIVEFFLILSAIAVVRAALFWKLLIASVVMLVGGYLGEVGAMSYWPAFAIGMAGWIYIIYEIFVGEASQISAAQGTEASKTAFNALRLIVTVGWSIYPIGYIVGAGAGGDAASNLNLVYNLADFVNKIAFGVVIWVAATSSSKA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGAAACGACAGGTTTAAATCCTAGTGATTATACAGGAGTCAGTTTCTGGATTATATCCGCAGCAATGGTTGCGGCAACTTACTTTTTCACTGTTGAACGCGATCGCGCAGAAGGC---AAGTGGAAAACATCTTTAACCGTTGCGGCGATGGTAACTGGTATTGCAGCGATTCACTATTTCTACATGCGAGGGGTTTGGGTA------------------------------TCAACA---------------------GGTGCAAGCCCGACAGTCTTCCGCTATGTCGATTGG------------------------TTGTTAACTGTACCACTGCAGATTGTCGAGTTTTTCTTGATTCTTTCTGCT---------ATA---GCTGTAGTTCGTGCT---GCTTTA------------------------------------TTCTGGAAG---CTGTTAATTGCATCCGTTGTGATGCTAGTTGGCGGATATCTCGGTGAA---------GTT------------------GGA------GCT---------------------------------ATG------------------------------------------------------------------TCCTAT------------------TGGCCAGCA---TTCGCAATTGGTATGGCTGGTTGGATATACATCATCTACGAAATC---------------TTC------GTT---GGTGAAGCTAGTCAAATCAGCGCAGCC------CAA---GGTACTGAAGCAAGT---AAA---ACT---GCC---TTC---AAT---GCACTG---CGTTTAATTGTAACTGTT---------------------------------------------------------------GGGTGG---------TCAATCTATCCCATAGGTTATATCGTAGGTGCTGGTGCA---GGTGGT---------------------------GATGCTGCA---------TCTAACCTCAACCTTGTATACAACCTTGCAGACTTCGTTAACAAGATTGCATTCGGTGTTGTTATTTGGGTAGCAGCTACATCTTCG---TCTAAGGCT------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------METTGLNPSDYTGVSFWIISAAMVAATYFFTVERDRAEG-KWKTSLTVAAMVTGIAAIHYFYMRGVWV----------ST-------GASPTVFRYVDW--------LLTVPLQIVEFFLILSA---I-AVVRA-AL------------FWK-LLIASVVMLVGGYLGE---V------G--A-----------M----------------------SY------WPA-FAIGMAGWIYIIYEI-----F--V-GEASQISAA--Q-GTEAS-K-T-A-F-N-AL-RLIVTV---------------------GW---SIYPIGYIVGAGA-GG---------DAA---SNLNLVYNLADFVNKIAFGVVIWVAATSS-SKA-------------------------------------- [unk-Proteo2-Glaciecola]_NZ_ABST01000005 [unk-Proteo2-Glaciecola] Glaciecola_sp_HTCC2999_genome_NZ_ABST01000005 gi|194323048|gb|NZ_ABST01000005| Glaciecola sp HTCC2999 ctg1100007007361, whole genome shotgun sequence Glaciecola sp HTCC2999 ctg1100007007361, whole genome shotgun sequence NZ_ABST01000005 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/Proteobacteria/Gammaproteobacteria/Alteromonadales/Alteromonadaceae/Glaciecola] #na genomic_DNA strain 14-nov-12 #na #na #na #na #na Direct Submission Giovannoni,S., Cho,J.C., Ferriera,S., Johnson,J., Kravitz,S., Halpern,A., Remington,K., Beeson,K., Tran,B., Rogers,Y.H., Friedman,R. and Venter,J.C. Submitted (30JUN2008) J Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA #na #na ATGAAAGATGTAATGTTGAATCCAACCGACTACGTAGGTATGTCGTTCTGGATTATTTCTGCCGCGATGCTTGCTGCCACATTCTTTTTCTTTATGGAAAGAGACCGTGCTGTAGGTAAGTGGAAAACCTCATTATCAGTAGCTGCATTAGTTACCGGTATCGCTGCACTTCATTATTTTTACATGCGTGAAGTGTGGATTATGACAGGTGAAAGCCCAACCACATTTAGATATGTGGATTGGCTATTGACTGTTCCACTACAAATCATCGAGTTTTACCTGATCCTCACTGCTATTGCGGTAGTGCGTGCAGCATTATTCTGGAAGTTGTTAGTAGCTTCATTAGTGATGTTAATATTTGGTTATTTCGGTGAAATTGGCACAATGAATGTGTGGTTAGCATTCGTTATTAGTATGGCTGGTTGGTTATATATCATCTATGAAGTATTTGTGGGTGAAGCCAGTAAGATCAGTGCTGCGAATGGCACGGCCGCCAGTAAGAAAGCCTTTAATGCGTTACGTTTAATTGTGACTATTGGTTGGTCAATTTATCCGATTGGTTACGTATTAGGGTATACCGCTGAAGGTACCGATGATGCACTTAACTTAGTCTACAACTTAGCAGACTTTGTCAATAAGATTGCATTTGGTGTTGTCATCTGGGCAGCCGCCACATCTGGTTCTGAAGAGAAAGCC MKDVMLNPTDYVGMSFWIISAAMLAATFFFFMERDRAVGKWKTSLSVAALVTGIAALHYFYMREVWIMTGESPTTFRYVDWLLTVPLQIIEFYLILTAIAVVRAALFWKLLVASLVMLIFGYFGEIGTMNVWLAFVISMAGWLYIIYEVFVGEASKISAANGTAASKKAFNALRLIVTIGWSIYPIGYVLGYTAEGTDDALNLVYNLADFVNKIAFGVVIWAAATSGSEEKA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAGATGTAATGTTGAATCCAACCGACTACGTAGGTATGTCGTTCTGGATTATTTCTGCCGCGATGCTTGCTGCCACATTCTTTTTCTTTATGGAAAGAGACCGTGCTGTAGGT---AAGTGGAAAACCTCATTATCAGTAGCTGCATTAGTTACCGGTATCGCTGCACTTCATTATTTTTACATGCGTGAAGTGTGGATT------------------------------ATGACA---------------------GGTGAAAGCCCAACCACATTTAGATATGTGGATTGG------------------------CTATTGACTGTTCCACTACAAATCATCGAGTTTTACCTGATCCTCACTGCT---------ATT---GCGGTAGTGCGTGCA---GCATTA------------------------------------TTCTGGAAG---TTGTTAGTAGCTTCATTAGTGATGTTAATATTTGGTTATTTCGGTGAA---------ATT------------------GGC------ACA---------------------------------ATG------------------------------------------------------------------AATGTG------------------TGGTTAGCA---TTCGTTATTAGTATGGCTGGTTGGTTATATATCATCTATGAAGTA---------------TTT------GTG---GGTGAAGCCAGTAAGATCAGTGCTGCG------AAT---GGCACGGCCGCCAGT---AAG---AAA---GCC---TTT---AAT---GCGTTA---CGTTTAATTGTGACTATT---------------------------------------------------------------GGTTGG---------TCAATTTATCCGATTGGTTACGTATTAGGGTATACCGCT---GAAGGT---------------------------ACC---GAT---------GATGCACTTAACTTAGTCTACAACTTAGCAGACTTTGTCAATAAGATTGCATTTGGTGTTGTCATCTGGGCAGCCGCCACATCTGGT---TCTGAAGAGAAAGCC------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------MKDVMLNPTDYVGMSFWIISAAMLAATFFFFMERDRAVG-KWKTSLSVAALVTGIAALHYFYMREVWI----------MT-------GESPTTFRYVDW--------LLTVPLQIIEFYLILTA---I-AVVRA-AL------------FWK-LLVASLVMLIFGYFGE---I------G--T-----------M----------------------NV------WLA-FVISMAGWLYIIYEV-----F--V-GEASKISAA--N-GTAAS-K-K-A-F-N-AL-RLIVTI---------------------GW---SIYPIGYVLGYTA-EG---------T-D---DALNLVYNLADFVNKIAFGVVIWAAATSG-SEEKA------------------------------------ [unk-Proteo2]_JX863199 [unk-Proteo2] MALINA_OTU33_348_Q_env_samples_JX863199 gi|425477348|gb|JX863199| Uncultured bacterium clone MALINA OTU33 348 Q putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU33 348 Q putative proteorhodopsin gene, partial cds JX863199 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 08-juil-09 0m_depth Pacific Ocean marine 53.36 -159.29 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTATTAACAGTGCCTCTTCAAATAATTGAATTCTACTTGATTCTAGCAGCCATTGCTGTTGTTGGAGCAGCGTTATTCTGGAGGTTGATGATTGCTTCAGTGGTAATGCTTGTTGCTGGCTATCTGGGTGAAATTGATGCAGTAAATGTATGGGGAGCTTTCATAGTCGGTATGGCCGCATGGATTTACATAATTTATGAAATCTTTGTGGGTGAAGCTAGCAAGATAAGTGCTGAAAATGGTACTGCTGCAAGTAAGACTGCGTTTAATGCTTTAAGAATTATTGTTACAGTT WLLTVPLQIIEFYLILAAIAVVGAALFWRLMIASVVMLVAGYLGEIDAVNVWGAFIVGMAAWIYIIYEIFVGEASKISAENGTAASKTAFNALRIIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTATTAACAGTGCCTCTTCAAATAATTGAATTCTACTTGATTCTAGCAGCC---------ATT---GCTGTTGTTGGAGCA---GCGTTA------------------------------------TTCTGGAGG---TTGATGATTGCTTCAGTGGTAATGCTTGTTGCTGGCTATCTGGGTGAA---------ATT------------------GAT------GCA---------------------------------GTA------------------------------------------------------------------AATGTA------------------TGGGGAGCT---TTCATAGTCGGTATGGCCGCATGGATTTACATAATTTATGAAATC---------------TTT------GTG---GGTGAAGCTAGCAAGATAAGTGCTGAA------AAT---GGTACTGCTGCAAGT---AAG---ACT---GCG---TTT---AAT---GCTTTA---AGAATTATTGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLQIIEFYLILAA---I-AVVGA-AL------------FWR-LMIASVVMLVAGYLGE---I------D--A-----------V----------------------NV------WGA-FIVGMAAWIYIIYEI-----F--V-GEASKISAE--N-GTAAS-K-T-A-F-N-AL-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_FJ862937 [unk-Proteo2] 32_env_samples_FJ862937 gi|226897418|gb|FJ862937| Uncultured bacterium clone 32 putative proteorhodopsin gene, partial cds Uncultured bacterium clone 32 putative proteorhodopsin gene, partial cds FJ862937 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 07-Dec-2009 #na coastal_seawater Atlantic Ocean marine 38.8489 -75.1076 Lightdependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTTGATTGGCTATTAACAGTGCCTCTTCAAATAATTGAATTCTACTTGATTCTAGCAGCTATTGCTGTTGTTGGAGCAGCGTTATTCTGGAGGTTGATGATTGCTTCAGTAGTAATGCTTGTTGCTGGTTATTTGGGTGAAATTGATGCAGTAAATGTATGGGGAGCTTTCATAGTCGGTATGGCCGCATGGATTTACATAATTTATGAGATCTTTGTGGGTGAAGCTAGCAAGATAAGTGCTGAAAATGGTACGGCTGCAAGTAAGACTGCGTTTAATGCTTTAAGAATTATTGTTACAGTTGGCTGGGCCATTTACGCTCGA VDWLLTVPLQIIEFYLILAAIAVVGAALFWRLMIASVVMLVAGYLGEIDAVNVWGAFIVGMAAWIYIIYEIFVGEASKISAENGTAASKTAFNALRIIVTVGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGATTGG------------------------CTATTAACAGTGCCTCTTCAAATAATTGAATTCTACTTGATTCTAGCAGCT---------ATT---GCTGTTGTTGGAGCA---GCGTTA------------------------------------TTCTGGAGG---TTGATGATTGCTTCAGTAGTAATGCTTGTTGCTGGTTATTTGGGTGAA---------ATT------------------GAT------GCA---------------------------------GTA------------------------------------------------------------------AATGTA------------------TGGGGAGCT---TTCATAGTCGGTATGGCCGCATGGATTTACATAATTTATGAGATC---------------TTT------GTG---GGTGAAGCTAGCAAGATAAGTGCTGAA------AAT---GGTACGGCTGCAAGT---AAG---ACT---GCG---TTT---AAT---GCTTTA---AGAATTATTGTTACAGTT---------------------------------------------------------------GGCTGG---------GCCATTTACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LLTVPLQIIEFYLILAA---I-AVVGA-AL------------FWR-LMIASVVMLVAGYLGE---I------D--A-----------V----------------------NV------WGA-FIVGMAAWIYIIYEI-----F--V-GEASKISAE--N-GTAAS-K-T-A-F-N-AL-RIIVTV---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [unk-Proteo2]_JX863200 [unk-Proteo2] MALINA_OTU33_460_Q_env_samples_JX863200 gi|425477350|gb|JX863200| Uncultured bacterium clone MALINA OTU33 460 Q putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU33 460 Q putative proteorhodopsin gene, partial cds JX863200 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 13Aug2009 0m_depth Arctic Ocean marine 69.25 -137.2 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTATTAACAGTGCCTCTCCAAATCATTGAATTCTATCTAATTCTAGCAGCTATTGCTATTGTTGGAGCAGCGTTATTCTGGAGATTGATGATTGCTTCAGTCGTAATGCTTGTAGCAGGATACTTAGGTGAAGTTGGTTCAGTAAATGTGTGGGGAGCCTTTGTAGTAGGCATGGCCGCATGGATTTACATAATTTATGAGATCTTTGTAGGTGAAGCGAGCAAGATAAGCGCTGAAAATGGTACAGCCGCGAGTAAGACAGCGTTTAATGCTCTAAGAATAATTGTTACATTT WLLTVPLQIIEFYLILAAIAIVGAALFWRLMIASVVMLVAGYLGEVGSVNVWGAFVVGMAAWIYIIYEIFVGEASKISAENGTAASKTAFNALRIIVTF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTATTAACAGTGCCTCTCCAAATCATTGAATTCTATCTAATTCTAGCAGCT---------ATT---GCTATTGTTGGAGCA---GCGTTA------------------------------------TTCTGGAGA---TTGATGATTGCTTCAGTCGTAATGCTTGTAGCAGGATACTTAGGTGAA---------GTT------------------GGT------TCA---------------------------------GTA------------------------------------------------------------------AATGTG------------------TGGGGAGCC---TTTGTAGTAGGCATGGCCGCATGGATTTACATAATTTATGAGATC---------------TTT------GTA---GGTGAAGCGAGCAAGATAAGCGCTGAA------AAT---GGTACAGCCGCGAGT---AAG---ACA---GCG---TTT---AAT---GCTCTA---AGAATAATTGTTACATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLQIIEFYLILAA---I-AIVGA-AL------------FWR-LMIASVVMLVAGYLGE---V------G--S-----------V----------------------NV------WGA-FVVGMAAWIYIIYEI-----F--V-GEASKISAE--N-GTAAS-K-T-A-F-N-AL-RIIVTF-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_DQ422626 [unk-Proteo2] clone_med-tb04-0m-h2_DQ422626 gi|90024772|gb|DQ422626| Uncultured bacterium clone med-tb04-0m-h2 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-h2 putative proteorhodopsin gene, partial cds. DQ422626 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTTTTAACAGTGCCTCTTCAGATTATAGAATTTTATTTAATATTGGCTGCAATAGCAGTAGTTAAATCATCGCTATTCTGGAGACTTCTAATAGCTTCGGTAATCATGTTAGTTGCTGGATATTTAGGTGAAGTAGGTTCAGTTAATGTATGGGCCGGTTTTATAGTAGGTATGCTTGGATGGTTGTATATCATCTATGAAGTTTTTGCTGGAGAAGCCAGTCAAATTAGTGCTAGCAAAGGAACTGTAGCAAGTCAAAAAGCTTTTAATGCATTAAGATTAGTAGTTACAGTTGGTTGGGCTATTTATCCA RYIDWLLTVPLQIIEFYLILAAIAVVKSSLFWRLLIASVIMLVAGYLGEVGSVNVWAGFIVGMLGWLYIIYEVFAGEASQISASKGTVASQKAFNALRLVVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTTTTAACAGTGCCTCTTCAGATTATAGAATTTTATTTAATATTGGCTGCA---------ATA---GCAGTAGTTAAATCA---TCGCTA------------------------------------TTCTGGAGA---CTTCTAATAGCTTCGGTAATCATGTTAGTTGCTGGATATTTAGGTGAA---------GTA------------------GGT------TCA---------------------------------GTT------------------------------------------------------------------AATGTA------------------TGGGCCGGT---TTTATAGTAGGTATGCTTGGATGGTTGTATATCATCTATGAAGTT---------------TTT------GCT---GGAGAAGCCAGTCAAATTAGTGCTAGC------AAA---GGAACTGTAGCAAGT---CAA---AAA---GCT---TTT---AAT---GCATTA---AGATTAGTAGTTACAGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQIIEFYLILAA---I-AVVKS-SL------------FWR-LLIASVIMLVAGYLGE---V------G--S-----------V----------------------NV------WAG-FIVGMLGWLYIIYEV-----F--A-GEASQISAS--K-GTVAS-Q-K-A-F-N-AL-RLVVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo2-ARCTIC32A02]_JX863302 [unk-Proteo2-ARCTIC32A02] MALINA_OTU40_154_Q_env_samples_JX863302 gi|425477554|gb|JX863302| Uncultured bacterium clone MALINA OTU40 154 Q putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU40 154 Q putative proteorhodopsin mRNA, partial cds JX863302 [[proteorhodopsin/Proteobacterial-like cluster 2/EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 08Aug2009 50m_depth Arctic Ocean marine 70.8 -133.73 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTATTAACGGTACCTCTTCAGATTGTTGAGTTTTATCTAATACTAGCTGCTATAGCAGTTGTTGCTGTATCAGTATTTTGGCGACTACTAATTGCTTCAGTGGTTATGTTAGTTGCAGGTTATCTTGGTGAAGTAGGTACCGTAGGAATATGGTCTGGCTTTACTGTTGGTATGATAGCTTGGATATACATCATCTATGAAGTATTCGCAGGCGAGGCTAGTAAAATTAGTGCAAGCAAGGGTACAGCAGCAAGTAAAAAAGCATTTAATGCTTTAAGACTTATTGTGACTGTT WLLTVPLQIVEFYLILAAIAVVAVSVFWRLLIASVVMLVAGYLGEVGTVGIWSGFTVGMIAWIYIIYEVFAGEASKISASKGTAASKKAFNALRLIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTATTAACGGTACCTCTTCAGATTGTTGAGTTTTATCTAATACTAGCTGCT---------ATA---GCAGTTGTTGCTGTA---TCAGTA------------------------------------TTTTGGCGA---CTACTAATTGCTTCAGTGGTTATGTTAGTTGCAGGTTATCTTGGTGAA---------GTA------------------GGT------ACC---------------------------------GTA------------------------------------------------------------------GGAATA------------------TGGTCTGGC---TTTACTGTTGGTATGATAGCTTGGATATACATCATCTATGAAGTA---------------TTC------GCA---GGCGAGGCTAGTAAAATTAGTGCAAGC------AAG---GGTACAGCAGCAAGT---AAA---AAA---GCA---TTT---AAT---GCTTTA---AGACTTATTGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLQIVEFYLILAA---I-AVVAV-SV------------FWR-LLIASVVMLVAGYLGE---V------G--T-----------V----------------------GI------WSG-FTVGMIAWIYIIYEV-----F--A-GEASKISAS--K-GTAAS-K-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-ARCTIC32A02]_EU795088 [unk-Proteo2-ARCTIC32A02] ARCTIC32_A_2_genomic_EU795088 gi|193084517|gb|EU795088| Uncultured bacterium ARCTIC32 A 02 genomic sequence Uncultured bacterium ARCTIC32 A 02 genomic sequence EU795088 [[proteorhodopsin/Proteobacterial-like cluster 2/EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:542421 genomic_DNA other 02-juil-08 #na Arctic Arctic Ocean marine 71.4 -156.8 Direct Submission Henn,M.R., Young,S., Jaffe,D.B., Gnerre,S., Berlin,A., Heiman,D., Hepburn,T., Sykes,S., Kirchman,D.L., Cottrell,M.T., Lander,E., Nusbaum,C. and Birren,B. Submitted (21MAY2008) Broad Institute of MIT and Harvard, 320 Charles Street, Cambridge, MA 02141, USA #na #na TTTTTAACAGGAGAGTTTTATATGTTAGATCCAAATGATTTTGTCGGGGTGAGCTTCTGGCTTTTATCCGCGGCAATGGTAGCTGCAACGTTTTTTTTCTGGGTAGAAAGAGATAGAGCTGTAGGAAAATGGAAAACATCACTTACAGTTGCTGCAATGGTTACAGGTATAGCAGCAATTCACTATTTTTATATGAGAGGGATTTGGGTAGATACAGGCTCGTCCCCAACAGTATTTAGATACGTAGATTGGCTGTTAACAGTTCCTTTACAGATTGTTGAGTTCTATTTGATATTAGCTGCTATTGCAGTTGTCGCTATGTCAGTATTTTGGCGGTTATTAATCGCTTCTGTAGTTATGCTACTTGGTGGCTACATTGGTGAAGTGAGTGGTGCTGGTATTGGCATGGCTTTCTGGATTGGTATGATTGCATGGATATATATCATCTATGAAATATTCGCAGGTGAAGCTAGTAAAATTAGTGCAAGCAAGGGTACAGCAGCAAGTAAAAAAGCATTTAATGCTTTAAGACTTATTGTGACTGTTGGTTGGGCTATATATCCAATAGGATACTGGCTTGGCTACAGTGGTGCAGCAGATGTGAATACATTAAATTTAGTCTATAACTTAGCTGACTTTGTTAATAAGATTGCGTTTGGTGTAGTTATCTGGGCAGCAGCAACATCAGGTTCAAAAGCT FLTGEFYMLDPNDFVGVSFWLLSAAMVAATFFFWVERDRAVGKWKTSLTVAAMVTGIAAIHYFYMRGIWVDTGSSPTVFRYVDWLLTVPLQIVEFYLILAAIAVVAMSVFWRLLIASVVMLLGGYIGEVSGAGIGMAFWIGMIAWIYIIYEIFAGEASKISASKGTAASKKAFNALRLIVTVGWAIYPIGYWLGYSGAADVNTLNLVYNLADFVNKIAFGVVIWAAATSGSKA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTAACAGGAGAGTTTTATATGTTAGATCCAAATGATTTTGTCGGGGTGAGCTTCTGGCTTTTATCCGCGGCAATGGTAGCTGCAACGTTTTTTTTCTGGGTAGAAAGAGATAGAGCTGTAGGA---AAATGGAAAACATCACTTACAGTTGCTGCAATGGTTACAGGTATAGCAGCAATTCACTATTTTTATATGAGAGGGATTTGGGTA------------------------------GATACA---------------------GGCTCGTCCCCAACAGTATTTAGATACGTAGATTGG------------------------CTGTTAACAGTTCCTTTACAGATTGTTGAGTTCTATTTGATATTAGCTGCT---------ATT---GCAGTTGTCGCTATG---TCAGTA------------------------------------TTTTGGCGG---TTATTAATCGCTTCTGTAGTTATGCTACTTGGTGGCTACATTGGTGAA---------GTG------------------AGT------GGT---------------------------------GCT------------------------------------------------------------------GGTATT------------------GGCATGGCT---TTCTGGATTGGTATGATTGCATGGATATATATCATCTATGAAATA---------------TTC------GCA---GGTGAAGCTAGTAAAATTAGTGCAAGC------AAG---GGTACAGCAGCAAGT---AAA---AAA---GCA---TTT---AAT---GCTTTA---AGACTTATTGTGACTGTT---------------------------------------------------------------GGTTGG---------GCTATATATCCAATAGGATACTGGCTTGGCTACAGTGGT---GCAGCA---------------------------------------GATGTGAATACATTAAATTTAGTCTATAACTTAGCTGACTTTGTTAATAAGATTGCGTTTGGTGTAGTTATCTGGGCAGCAGCAACATCAGGTTCAAAAGCT--------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------FLTGEFYMLDPNDFVGVSFWLLSAAMVAATFFFWVERDRAVG-KWKTSLTVAAMVTGIAAIHYFYMRGIWV----------DT-------GSSPTVFRYVDW--------LLTVPLQIVEFYLILAA---I-AVVAM-SV------------FWR-LLIASVVMLLGGYIGE---V------S--G-----------A----------------------GI------GMA-FWIGMIAWIYIIYEI-----F--A-GEASKISAS--K-GTAAS-K-K-A-F-N-AL-RLIVTV---------------------GW---AIYPIGYWLGYSG-AA-------------DVNTLNLVYNLADFVNKIAFGVVIWAAATSGSKA--------------------------------------- [unk-Proteo2-ARCTIC32A02]_EF089400 [unk-Proteo2-ARCTIC32A02] EB0_41B09_genomic_PR2_EF089400 gi|119713680|gb|EF089400| Uncultured marine bacterium EB0 41B09 genomic sequence Uncultured marine bacterium EB0 41B09 genomic sequence EF089400 [[proteorhodopsin/Proteobacterial-like cluster 2/EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:415438 genomic_DNA other 16-nov-07 #na #na Pacific Ocean marine 36.8 -122 #na #na #na #na #na ATGTTAAATCCATCAGATTACGTTGGAGTTACCTTTTGGCTGCTTTCTGCTGCTATGGTTGCTGCAACATTTTTTTTCTGGGTTGAGAGAGATCGAGCTGTAGGTAAATGGAAAACTTCACTTACAGTTGCCGCAATGGTTACAGGTATTGCTGCTATTCACTATTTTTACATGCGTGGTGTTTGGATTGATACTGGAAGTTCACCTACAGTATTTAGATACGTAGATTGGTTACTTACAGTTCCACTACAAATTGTAGAGTTCTATTTGATTCTTGCTGCGATCGCAGTTGTTTCTATATCCGTTTTCTGGCGTTTACTTATCGCTTCTGTAGTTATGTTAGTTGCAGGCTACATTGGTGAAGTAAGTGCAATGGGAGACGGTGGTAGCTTATGGTCTGGTTTCTGGATCGGTATGGTTGCATGGTTATACATCATCTGGGAAGTATTTAAAGGTGAAGCTAGCCAAATTAGTGCAAGCAAAGGTACTGCGGCAAGTAAAAAAGCATTTAATGCGTTACGATTAATTGTAACTGTTGGTTGGGCTATTTATCCGATTGGTTACTATCTTGGGTACACAGGCAGCGCTGATGCCGGCACTCTAAACATCGTATATAACTTAGCTGACTTTGTTAACAAGATTGCCTTCGGTGTAGTAATTTGGGCAGCAGCTACATCAGGTGCAAAAGCCAAG MLNPSDYVGVTFWLLSAAMVAATFFFWVERDRAVGKWKTSLTVAAMVTGIAAIHYFYMRGVWIDTGSSPTVFRYVDWLLTVPLQIVEFYLILAAIAVVSISVFWRLLIASVVMLVAGYIGEVSAMGDGGSLWSGFWIGMVAWLYIIWEVFKGEASQISASKGTAASKKAFNALRLIVTVGWAIYPIGYYLGYTGSADAGTLNIVYNLADFVNKIAFGVVIWAAATSGAKAK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTTAAATCCATCAGATTACGTTGGAGTTACCTTTTGGCTGCTTTCTGCTGCTATGGTTGCTGCAACATTTTTTTTCTGGGTTGAGAGAGATCGAGCTGTAGGT---AAATGGAAAACTTCACTTACAGTTGCCGCAATGGTTACAGGTATTGCTGCTATTCACTATTTTTACATGCGTGGTGTTTGGATT------------------------------GATACT---------------------GGAAGTTCACCTACAGTATTTAGATACGTAGATTGG------------------------TTACTTACAGTTCCACTACAAATTGTAGAGTTCTATTTGATTCTTGCTGCG---------ATC---GCAGTTGTTTCTATA---TCCGTT------------------------------------TTCTGGCGT---TTACTTATCGCTTCTGTAGTTATGTTAGTTGCAGGCTACATTGGTGAA---------GTA------------------AGT------GCA---------------------------------ATGGGA---GACGGT------GGT---------------------------------------------AGCTTA------------------TGGTCTGGT---TTCTGGATCGGTATGGTTGCATGGTTATACATCATCTGGGAAGTA---------------TTT------AAA---GGTGAAGCTAGCCAAATTAGTGCAAGC------AAA---GGTACTGCGGCAAGT---AAA---AAA---GCA---TTT---AAT---GCGTTA---CGATTAATTGTAACTGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCGATTGGTTACTATCTTGGGTACACAGGC---AGCGCT---------------------------GAT---GCC---------GGCACTCTAAACATCGTATATAACTTAGCTGACTTTGTTAACAAGATTGCCTTCGGTGTAGTAATTTGGGCAGCAGCTACATCAGGT---GCAAAAGCCAAG--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------MLNPSDYVGVTFWLLSAAMVAATFFFWVERDRAVG-KWKTSLTVAAMVTGIAAIHYFYMRGVWI----------DT-------GSSPTVFRYVDW--------LLTVPLQIVEFYLILAA---I-AVVSI-SV------------FWR-LLIASVVMLVAGYIGE---V------S--A-----------MG-DG--G---------------SL------WSG-FWIGMVAWLYIIWEV-----F--K-GEASQISAS--K-GTAAS-K-K-A-F-N-AL-RLIVTV---------------------GW---AIYPIGYYLGYTG-SA---------D-A---GTLNIVYNLADFVNKIAFGVVIWAAATSG-AKAK------------------------------------- [unk-Proteo2-ARCTIC32A02]_DQ203446 [unk-Proteo2-ARCTIC32A02] medHO10B12_env_samples_DQ203446 gi|77547340|gb|DQ203446| Uncultured bacterium clone medHO10B12 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10B12 predicted proteorhodopsin gene, partial cds DQ203446 [[proteorhodopsin/Proteobacterial-like cluster 2/EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATACATTGATTGGCTGCTCACAGTTCCACTTCAAATTGTAGAGTTTTATTTAATTCTTGCTGCTATTGCAGTTGTTTCTATTTCTGTTTTCTGGCGATTACTTATCGCTTCTGTGGTTATGCTAGTTGCAGGCTACATTGGTGAAGTAAGTGCAATGGGAGATGGCGGTAGCCTATGGTCTGGTTTCTGGATCGGTATGGTTGCATGGTTGTACATTATCTGGGAAGTATTTAAAGGTGAAGCTAGCCAGATTAGTGCAAGCAAAGGTACTGCGGCAAGTAAAAAGGCGTTCAATGCACTTAGAATGATAGTGACTGTTGGTTGGGCCATATATCCA RYIDWLLTVPLQIVEFYLILAAIAVVSISVFWRLLIASVVMLVAGYIGEVSAMGDGGSLWSGFWIGMVAWLYIIWEVFKGEASQISASKGTAASKKAFNALRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATTGATTGG------------------------CTGCTCACAGTTCCACTTCAAATTGTAGAGTTTTATTTAATTCTTGCTGCT---------ATT---GCAGTTGTTTCTATT---TCTGTT------------------------------------TTCTGGCGA---TTACTTATCGCTTCTGTGGTTATGCTAGTTGCAGGCTACATTGGTGAA---------GTA------------------AGT------GCA---------------------------------ATGGGA---GATGGC------GGT---------------------------------------------AGCCTA------------------TGGTCTGGT---TTCTGGATCGGTATGGTTGCATGGTTGTACATTATCTGGGAAGTA---------------TTT------AAA---GGTGAAGCTAGCCAGATTAGTGCAAGC------AAA---GGTACTGCGGCAAGT---AAA---AAG---GCG---TTC---AAT---GCACTT---AGAATGATAGTGACTGTT---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQIVEFYLILAA---I-AVVSI-SV------------FWR-LLIASVVMLVAGYIGE---V------S--A-----------MG-DG--G---------------SL------WSG-FWIGMVAWLYIIWEV-----F--K-GEASQISAS--K-GTAAS-K-K-A-F-N-AL-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo2-ARCTIC32A02]_1105163462254 [unk-Proteo2-ARCTIC32A02] JCVI_ORF_1105163462254_GS013_Coastal_3m jcvi|1105163462254| 1105163462254 JCVI ORF 1105163462254 1105163462254 [[proteorhodopsin/Proteobacterial-like cluster 2/EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 19-DEC-2003 Coastal/3m_depth/S_n.a/GS013/Off_Nags_Head/NC/North_American_East_Coast Atlantic Ocean marine 36.003887 -75.39472 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TTGTTTAAACGTTTTTATAGGAGGGTTTTAAATATGTTAAATCCATCAGATTACGTTGGAGTTACCTTTTGGCTGCTTTCAGCGGCTATGGTTGCTGCAACATTTTTTTTCTGGGTTGAGAGAGATAGAGCTGTAGGTAAATGGAAGACTTCGCTTACAGTAGCTGCAATGGTTACAGGTATTGCTGCTATTCATTACTTTTACATGCGTGGTGTTTGGATTGATACAGGAAGTTCGCCAACTGTATTTAGATACGTAGATTGGCTTCTTACAGTACCACTTCAAATTGTTGAGTTTTATTTAATTCTTGCTGCGATTGCAGTCGTTTCTATTTCAGTATTTTGGCGTTTATTAATTGCCTCAGTAGTTATGTTAGTAGCTGGCTACATTGGTGAAGTAAGTGCAATGGGAGACGGTGGTAGCCTATGGTCTGGTTTCTGGATTGGTATGGTTGCATGGTTATATATCATCTGGGAAGTATTTAAAGGTGAAGCTAGCCAGATTAGCGCAAGCAAAGGTACCGCTGCAAGTAAGAAAGCTTTTAATGCGTTAAGATTAATCGTAACTGTTGGTTGGGCTATTTATCCAATCGGTTACTATCTTGGGTACACAGGCAGTGCTGATGCCGGTACTCTAAATATCGTATATAACTTAGCTGACTTTGTTAACAAGATTGCCTTCGGTGTTGTAATTTGGGCAGCAGCTACATCAGGTACAAAAACTAAG LFKRFYRRVLNMLNPSDYVGVTFWLLSAAMVAATFFFWVERDRAVGKWKTSLTVAAMVTGIAAIHYFYMRGVWIDTGSSPTVFRYVDWLLTVPLQIVEFYLILAAIAVVSISVFWRLLIASVVMLVAGYIGEVSAMGDGGSLWSGFWIGMVAWLYIIWEVFKGEASQISASKGTAASKKAFNALRLIVTVGWAIYPIGYYLGYTGSADAGTLNIVYNLADFVNKIAFGVVIWAAATSGTKTK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTTAAACGTTTTTATAGGAGGGTTTTAAATATGTTAAATCCATCAGATTACGTTGGAGTTACCTTTTGGCTGCTTTCAGCGGCTATGGTTGCTGCAACATTTTTTTTCTGGGTTGAGAGAGATAGAGCTGTAGGT---AAATGGAAGACTTCGCTTACAGTAGCTGCAATGGTTACAGGTATTGCTGCTATTCATTACTTTTACATGCGTGGTGTTTGGATT------------------------------GATACA---------------------GGAAGTTCGCCAACTGTATTTAGATACGTAGATTGG------------------------CTTCTTACAGTACCACTTCAAATTGTTGAGTTTTATTTAATTCTTGCTGCG---------ATT---GCAGTCGTTTCTATT---TCAGTA------------------------------------TTTTGGCGT---TTATTAATTGCCTCAGTAGTTATGTTAGTAGCTGGCTACATTGGTGAA---------GTA------------------AGT------GCA---------------------------------ATGGGA---GACGGT------GGT---------------------------------------------AGCCTA------------------TGGTCTGGT---TTCTGGATTGGTATGGTTGCATGGTTATATATCATCTGGGAAGTA---------------TTT------AAA---GGTGAAGCTAGCCAGATTAGCGCAAGC------AAA---GGTACCGCTGCAAGT---AAG---AAA---GCT---TTT---AAT---GCGTTA---AGATTAATCGTAACTGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCAATCGGTTACTATCTTGGGTACACAGGC---AGTGCT---------------------------GAT---GCC---------GGTACTCTAAATATCGTATATAACTTAGCTGACTTTGTTAACAAGATTGCCTTCGGTGTTGTAATTTGGGCAGCAGCTACATCAGGT---ACAAAAACTAAG--------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------LFKRFYRRVLNMLNPSDYVGVTFWLLSAAMVAATFFFWVERDRAVG-KWKTSLTVAAMVTGIAAIHYFYMRGVWI----------DT-------GSSPTVFRYVDW--------LLTVPLQIVEFYLILAA---I-AVVSI-SV------------FWR-LLIASVVMLVAGYIGE---V------S--A-----------MG-DG--G---------------SL------WSG-FWIGMVAWLYIIWEV-----F--K-GEASQISAS--K-GTAAS-K-K-A-F-N-AL-RLIVTV---------------------GW---AIYPIGYYLGYTG-SA---------D-A---GTLNIVYNLADFVNKIAFGVVIWAAATSG-TKTK------------------------------------- [unk-Proteo2-ARCTIC32A02]_1105142687752 [unk-Proteo2-ARCTIC32A02] JCVI_ORF_1105142687752_GS013_Coastal_3m jcvi|1105142687752| 1105142687752 JCVI ORF 1105142687752 1105142687752 [[proteorhodopsin/Proteobacterial-like cluster 2/EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 19-DEC-2003 Coastal/3m_depth/S_n.a/GS013/Off_Nags_Head/NC/North_American_East_Coast Atlantic Ocean marine 36.003887 -75.39472 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TTGTTTAAACGTTTTTATAGGAGGGTTTTAAATATGTTAAATCCATCAGATTACGTTGGAGTTACCTTTTGGCTGCTTTCAGCGGCTATGGTTGCTGCAACATTTTTTTTCTGGGTTGAGAGAGATAGAGCTGTAGGTAAATGGAAGACTTCACTTACAGTAGCTGCAATGGTTACAGGTATTGCTGCTATTCATTACTTTTACATGCGTGGTGTTTGGATTGATACAGGAAGTTCGCCAACAGTATTTAGATACGTAGATTGGCTTCTTACAGTACCACTTCAAATTGTTGAGTTTTATTTAATTCTTGCTGCGATTGCAGTCGTTTCTATTTCAGTATTTTGGCGTTTATTAATTGCCTCAGTAGTTATGTTAGTAGCTGGCTACATTGGTGAAGTAAGTGCAATGGGAGACGGTGGTAGCCTATGGTCTGGTTTCTGGATTGGTATGGTTGCATGGTTATATATCATCTGGGAGGTATTTAAAGGTGAAGCTAGCCAGATTAGTGCAAGCAAAGGTACCGCTGCAAGTAAAAAAGCTTTTAATGCGTTAAGATTAATCGTAACTGTTGGTTGGGCTATTTATCCAATCGGTTACTATCTTGGGTACACAGGCAGTGCTGATGCCGGTACTCTAAATATCGTATATAACTTAGCTGACTTTGTTAACAAGATTGCCTTCGGTGTTGTAATTTGGGCAGCAGCTACATCAGGTACAAAAACTAAG LFKRFYRRVLNMLNPSDYVGVTFWLLSAAMVAATFFFWVERDRAVGKWKTSLTVAAMVTGIAAIHYFYMRGVWIDTGSSPTVFRYVDWLLTVPLQIVEFYLILAAIAVVSISVFWRLLIASVVMLVAGYIGEVSAMGDGGSLWSGFWIGMVAWLYIIWEVFKGEASQISASKGTAASKKAFNALRLIVTVGWAIYPIGYYLGYTGSADAGTLNIVYNLADFVNKIAFGVVIWAAATSGTKTK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTTAAACGTTTTTATAGGAGGGTTTTAAATATGTTAAATCCATCAGATTACGTTGGAGTTACCTTTTGGCTGCTTTCAGCGGCTATGGTTGCTGCAACATTTTTTTTCTGGGTTGAGAGAGATAGAGCTGTAGGT---AAATGGAAGACTTCACTTACAGTAGCTGCAATGGTTACAGGTATTGCTGCTATTCATTACTTTTACATGCGTGGTGTTTGGATT------------------------------GATACA---------------------GGAAGTTCGCCAACAGTATTTAGATACGTAGATTGG------------------------CTTCTTACAGTACCACTTCAAATTGTTGAGTTTTATTTAATTCTTGCTGCG---------ATT---GCAGTCGTTTCTATT---TCAGTA------------------------------------TTTTGGCGT---TTATTAATTGCCTCAGTAGTTATGTTAGTAGCTGGCTACATTGGTGAA---------GTA------------------AGT------GCA---------------------------------ATGGGA---GACGGT------GGT---------------------------------------------AGCCTA------------------TGGTCTGGT---TTCTGGATTGGTATGGTTGCATGGTTATATATCATCTGGGAGGTA---------------TTT------AAA---GGTGAAGCTAGCCAGATTAGTGCAAGC------AAA---GGTACCGCTGCAAGT---AAA---AAA---GCT---TTT---AAT---GCGTTA---AGATTAATCGTAACTGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCAATCGGTTACTATCTTGGGTACACAGGC---AGTGCT---------------------------GAT---GCC---------GGTACTCTAAATATCGTATATAACTTAGCTGACTTTGTTAACAAGATTGCCTTCGGTGTTGTAATTTGGGCAGCAGCTACATCAGGT---ACAAAAACTAAG--------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------LFKRFYRRVLNMLNPSDYVGVTFWLLSAAMVAATFFFWVERDRAVG-KWKTSLTVAAMVTGIAAIHYFYMRGVWI----------DT-------GSSPTVFRYVDW--------LLTVPLQIVEFYLILAA---I-AVVSI-SV------------FWR-LLIASVVMLVAGYIGE---V------S--A-----------MG-DG--G---------------SL------WSG-FWIGMVAWLYIIWEV-----F--K-GEASQISAS--K-GTAAS-K-K-A-F-N-AL-RLIVTV---------------------GW---AIYPIGYYLGYTG-SA---------D-A---GTLNIVYNLADFVNKIAFGVVIWAAATSG-TKTK------------------------------------- [unk-Proteo2]_KJ926235 [unk-Proteo2] RHOMEO_AG_OTU6 gb|KJ926235| Uncultured bacterium cloneRHOMEO AG OTU6 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU6 putative proteorhodopsin gene, partial cds KJ926235 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGCTACTTACTGTTCCACTACAAATTACTGAATTCTTCTTAATCCTCTCAGCTATTACTGTTGTAAGGGCTCAGCTTTTCTGGAAGTTACTCGTAGCTTCAGTTGTAATGCTTGTCACAGGCTATTTAGGTGAAGTAGGTCAAATGGAAGGCGGAAATGCTGGTCATCTATGGCCAATGTTTATAGTTGGTACATTAGCATGGTTATACATCATCTATGAAATATTTGCGGGTGAAGCCTCTAGAATTAATGCTGCTTCAGGAACTGCTGCTTCGCAAAAAGCGTTTAGTGCTTTACGCATAATCGTAACTGTA WLLTVPLQITEFFLILSAITVVRAQLFWKLLVASVVMLVTGYLGEVGQMEGGNAGHLWPMFIVGTLAWLYIIYEIFAGEASRINAASGTAASQKAFSALRIIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTACTTACTGTTCCACTACAAATTACTGAATTCTTCTTAATCCTCTCAGCT---------ATT---ACTGTTGTAAGGGCT---CAGCTT------------------------------------TTCTGGAAG---TTACTCGTAGCTTCAGTTGTAATGCTTGTCACAGGCTATTTAGGTGAA---------GTA------------------GGT------CAA---------------------------------ATG------------------------------------------------------------------GAAGGCGGAAATGCTGGTCATCTATGGCCAATG---TTTATAGTTGGTACATTAGCATGGTTATACATCATCTATGAAATA---------------TTT------GCG---GGTGAAGCCTCTAGAATTAATGCTGCT------TCA---GGAACTGCTGCTTCG---CAA---AAA---GCG---TTT---AGT---GCTTTA---CGCATAATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLQITEFFLILSA---I-TVVRA-QL------------FWK-LLVASVVMLVTGYLGE---V------G--Q-----------M----------------------EGGNAGHLWPM-FIVGTLAWLYIIYEI-----F--A-GEASRINAA--S-GTAAS-Q-K-A-F-S-AL-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_DQ422244 [unk-Proteo2] clone_20-3_DQ422244 gi|90024008|gb|DQ422244| Uncultured bacterium clone 20-3 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 20-3 putative proteorhodopsin gene, partial cds. DQ422244 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTACTAACAGTACCTCTACAAATCGTTGAATTTTATTTAATCCTTGCTGCGATAGCTGTTGTTGCTGCATCACTTTTCTGGAGACTATTAATTGCTTCAGTGGTAATGCTAGTTGCTGGTTATCTCGGTGAAATAGGCGCAATGAATGTATGGCTTGGCTTCGTAATTGGTATGGCCGCATGGATATACATCATTTATGAAATCTTTGCTGGTGAAGCAAGTAAAATCAGTGCTGCTGAGGGTACTGCTGCATCTCAAAAAGCTTTCAATGCGTTGAGAATTATCGTAACTGTTGGGTGGGCTATTTATCCA RYIDWLLTVPLQIVEFYLILAAIAVVAASLFWRLLIASVVMLVAGYLGEIGAMNVWLGFVIGMAAWIYIIYEIFAGEASKISAAEGTAASQKAFNALRIIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTAACAGTACCTCTACAAATCGTTGAATTTTATTTAATCCTTGCTGCG---------ATA---GCTGTTGTTGCTGCA---TCACTT------------------------------------TTCTGGAGA---CTATTAATTGCTTCAGTGGTAATGCTAGTTGCTGGTTATCTCGGTGAA---------ATA------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------AATGTA------------------TGGCTTGGC---TTCGTAATTGGTATGGCCGCATGGATATACATCATTTATGAAATC---------------TTT------GCT---GGTGAAGCAAGTAAAATCAGTGCTGCT------GAG---GGTACTGCTGCATCT---CAA---AAA---GCT---TTC---AAT---GCGTTG---AGAATTATCGTAACTGTT---------------------------------------------------------------GGGTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQIVEFYLILAA---I-AVVAA-SL------------FWR-LLIASVVMLVAGYLGE---I------G--A-----------M----------------------NV------WLG-FVIGMAAWIYIIYEI-----F--A-GEASKISAA--E-GTAAS-Q-K-A-F-N-AL-RIIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ926210 [unk-Proteo2] RHOMEO_AG_OTU25 gb|KJ926210| Uncultured bacterium cloneRHOMEO AG OTU25 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU25 putative proteorhodopsin gene, partial cds KJ926210 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGCTACTAACAGTACCTCTACAAATCGTTGAATTTTACTTAATACTTGCTGCGATAGCTGTTGTTGCTGCATCACTTTTCTGGAGACTATTAATTGCTTCAGTGGTAATGCTAGTTGCTGGTTATCTCGGGGAAATAGGCGCAATGAATGTATGGCTTGGCTTCGTAATTGGTATGGCCGCATGGATATACATCATTTATGAAATCTTTGCTGGTGAAGCAAGTAAAATCAGTGCTGCTGAGGGTACTGCTGCATCTCAAAAAGCTTTCAATGCGTTGAGAATTATCGTAACTGTT WLLTVPLQIVEFYLILAAIAVVAASLFWRLLIASVVMLVAGYLGEIGAMNVWLGFVIGMAAWIYIIYEIFAGEASKISAAEGTAASQKAFNALRIIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTACTAACAGTACCTCTACAAATCGTTGAATTTTACTTAATACTTGCTGCG---------ATA---GCTGTTGTTGCTGCA---TCACTT------------------------------------TTCTGGAGA---CTATTAATTGCTTCAGTGGTAATGCTAGTTGCTGGTTATCTCGGGGAA---------ATA------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------AATGTA------------------TGGCTTGGC---TTCGTAATTGGTATGGCCGCATGGATATACATCATTTATGAAATC---------------TTT------GCT---GGTGAAGCAAGTAAAATCAGTGCTGCT------GAG---GGTACTGCTGCATCT---CAA---AAA---GCT---TTC---AAT---GCGTTG---AGAATTATCGTAACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLQIVEFYLILAA---I-AVVAA-SL------------FWR-LLIASVVMLVAGYLGE---I------G--A-----------M----------------------NV------WLG-FVIGMAAWIYIIYEI-----F--A-GEASKISAA--E-GTAAS-Q-K-A-F-N-AL-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_1112737196321 [unk-Proteo2-b] JCVI_ORF_1112737196321_GS123_Open_Ocean_3m jcvi|1112737196321| 1112737196321 JCVI ORF 1112737196321 1112737196321 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 01-oct-05 Open_Ocean/3m_depth/S_35.8_psu/GS123/International_water_between_Madagascar_and_South_Africa/Indian_Ocean Indian Ocean marine -32.399166 36.591946 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TCAGAGGAGGAAGCAGTAATGGACAAATCATTAATGTTAGACCCAGCTGATTACGTTGGGGTAACTTTTTGGATTATTTCTGCAGCTATGGTAGCTGCAACTTATTTCTTTTACGTTGAACGCGATAGGGCGGTAGGAAAATGGAAAACCTCATTAACAGTAGCTGCCATGGTTACTGGTATTGCCGCCATTCACTACTTCTATATGCGTGAAGTTTGGGTTGGGACTGGAGAATCACCAATTGTATTTCGATACGTTGATTGGCTGTTAACCGTTCCTCTTCAAATAGTTGAATTTTATCTCATTTTAGCTGCCGTAGCAGCAGTCGCTGCCGGATTATTCTGGAGGCTCATGATTGCATCCCTTGTGATGTTGATAGCGGGTTATCTAGGCGAAGTTGGCGGCGCGGATGGTGATATGTTGTGGATTTGGTTCATCATTGGATTGGCCGGTTGGATTTATATCCTTTATGAAATCTTTGCTGGTGAAGCTAGTAAGATCAATGCAAGTGAAGGAACAAATGCATCAAAAACAGCATTTAATGCCCTCAAATGGATCGTTACCATAGGATGGGCGATCTACCCACTTGGCTATGTCTGGGGCTATGCCGGCGGCGGAGACGCAGCAGCACTTAATATCATCTACAACCTTGCTGATTTTATAAATAAAATTGCATTCGGTGTAGTGATTTGGGTAGCGGCAACATCGCCTGAGTCCAATAAA SEEEAVMDKSLMLDPADYVGVTFWIISAAMVAATYFFYVERDRAVGKWKTSLTVAAMVTGIAAIHYFYMREVWVGTGESPIVFRYVDWLLTVPLQIVEFYLILAAVAAVAAGLFWRLMIASLVMLIAGYLGEVGGADGDMLWIWFIIGLAGWIYILYEIFAGEASKINASEGTNASKTAFNALKWIVTIGWAIYPLGYVWGYAGGGDAAALNIIYNLADFINKIAFGVVIWVAATSPESNK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGAGGAGGAAGCAGTAATGGACAAATCATTAATGTTAGACCCAGCTGATTACGTTGGGGTAACTTTTTGGATTATTTCTGCAGCTATGGTAGCTGCAACTTATTTCTTTTACGTTGAACGCGATAGGGCGGTAGGAAAATGGAAAACCTCATTAACAGTAGCTGCCATGGTTACTGGTATTGCCGCCATTCACTAC------------------TTCTATATGCGTGAAGTTTGGGTTGGGACTGGAGAATCACCAATTGTATTTCGATACGTTGATTGG------------------------CTGTTAACCGTTCCTCTTCAAATAGTTGAATTTTATCTCATTTTAGCTGCC---------GTA---GCAGCAGTCGCTGCC---GGATTA------------------------------------TTCTGGAGG---CTCATGATTGCATCCCTTGTGATGTTGATAGCGGGTTATCTAGGCGAA---------GTT------------------GGC------GGC---------------------------------GCG------------------------------------------------------------------GATGGT---------GATATGTTGTGGATTTGG---TTCATCATTGGATTGGCCGGTTGGATTTATATCCTTTATGAAATC---------------TTT------GCT---GGTGAAGCTAGTAAGATCAATGCAAGT------GAA---GGAACAAATGCATCA---AAA---ACA---GCA---TTT---AAT---GCCCTC---AAATGGATCGTTACCATA---------------------------------------------------------------GGATGG---------GCGATCTACCCACTTGGCTATGTCTGGGGCTATGCCGGC---GGCGGA---------GAC---GCAGCAGCACTTAATATCATCTACAACCTTGCTGATTTTATAAATAAAATTGCATTCGGTGTAGTGATTTGGGTAGCGGCAACATCGCCTGAGTCCAATAAA--------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------SEEEAVMDKSLMLDPADYVGVTFWIISAAMVAATYFFYVERDRAVGKWKTSLTVAAMVTGIAAIHY------FYMREVWVGTGESPIVFRYVDW--------LLTVPLQIVEFYLILAA---V-AAVAA-GL------------FWR-LMIASLVMLIAGYLGE---V------G--G-----------A----------------------DG---DMLWIW-FIIGLAGWIYILYEI-----F--A-GEASKINAS--E-GTNAS-K-T-A-F-N-AL-KWIVTI---------------------GW---AIYPLGYVWGYAG-GG---D-AAALNIIYNLADFINKIAFGVVIWVAATSPESNK----------------------------------------------- [unk-Proteo2-b]_DQ203332 [unk-Proteo2-b] SS114a80G1_env_samples_DQ203332 gi|77547112|gb|DQ203332| Uncultured bacterium clone SS114a80G1 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a80G1 predicted proteorhodopsin gene, partial cds DQ203332 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_80m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_2003 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTGCTAACTGTTCCTCTACAAATAGTTGAGTTTTATCTCATATTGGCTGCAGTCGCGGCGGTAGCAGCTGGATTATTCTGGCGATTGCTAATCGCATCCCTTGTGATGTTGATAGCTGGTTATCTAGGCGAAGTTGGCGGCGCAGATGGTGATATGTTGTGGATTTGGTTCATCATTGGGATGGCCGGTTGGATTTATATCCTTTATGAAATCTTTGCTGGTGAAGCTAGTAAGATCAATGCAAGTGGAGGAACAAATGCATCAAAAACAGCATTTAATGCCCTTAAATGGATCGTTACCATAGGGTGGGCCATCTATCCA RYIDWLLTVPLQIVEFYLILAAVAAVAAGLFWRLLIASLVMLIAGYLGEVGGADGDMLWIWFIIGMAGWIYILYEIFAGEASKINASGGTNASKTAFNALKWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTGCTAACTGTTCCTCTACAAATAGTTGAGTTTTATCTCATATTGGCTGCA---------GTC---GCGGCGGTAGCAGCT---GGATTA------------------------------------TTCTGGCGA---TTGCTAATCGCATCCCTTGTGATGTTGATAGCTGGTTATCTAGGCGAA---------GTT------------------GGC------GGC---------------------------------GCA------------------------------------------------------------------GATGGT---------GATATGTTGTGGATTTGG---TTCATCATTGGGATGGCCGGTTGGATTTATATCCTTTATGAAATC---------------TTT------GCT---GGTGAAGCTAGTAAGATCAATGCAAGT------GGA---GGAACAAATGCATCA---AAA---ACA---GCA---TTT---AAT---GCCCTT---AAATGGATCGTTACCATA---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQIVEFYLILAA---V-AAVAA-GL------------FWR-LLIASLVMLIAGYLGE---V------G--G-----------A----------------------DG---DMLWIW-FIIGMAGWIYILYEI-----F--A-GEASKINAS--G-GTNAS-K-T-A-F-N-AL-KWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_DQ203686 [unk-Proteo2-b] medHO155C5_env_samples_DQ203686 gi|77547820|gb|DQ203686| Uncultured bacterium clone medHO155C5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155C5 predicted proteorhodopsin gene, partial cds DQ203686 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATAGATTGGCTGCTAACTGTTCCTCTACAAATAGTTGAGTTTTATCTCATATTGGCTGCAGTCGCGGCGGTAGCAGCTGGATTATTCTGGCGATTGCTAATCGCATCCCTTGTGATGTTGATAGCTGGTTATCTAGGCGAAGTTGGCGGCGCAGATGGTGATATGTTGTGGATTTGGTTCATCATTGGGATGGCCGGTTGGATTTATATCCTTTATGAAATCTTTGCTGGTGAAGCTAGTAAGATCAATGCAAGTGAAGGAACAAATGCATCAAAAACAGCATTTAATGCCCTCAAATGGATCGTTACCATAGGGTGGGCCATTTACCCA RYIDWLLTVPLQIVEFYLILAAVAAVAAGLFWRLLIASLVMLIAGYLGEVGGADGDMLWIWFIIGMAGWIYILYEIFAGEASKINASEGTNASKTAFNALKWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGATTGG------------------------CTGCTAACTGTTCCTCTACAAATAGTTGAGTTTTATCTCATATTGGCTGCA---------GTC---GCGGCGGTAGCAGCT---GGATTA------------------------------------TTCTGGCGA---TTGCTAATCGCATCCCTTGTGATGTTGATAGCTGGTTATCTAGGCGAA---------GTT------------------GGC------GGC---------------------------------GCA------------------------------------------------------------------GATGGT---------GATATGTTGTGGATTTGG---TTCATCATTGGGATGGCCGGTTGGATTTATATCCTTTATGAAATC---------------TTT------GCT---GGTGAAGCTAGTAAGATCAATGCAAGT------GAA---GGAACAAATGCATCA---AAA---ACA---GCA---TTT---AAT---GCCCTC---AAATGGATCGTTACCATA---------------------------------------------------------------GGGTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQIVEFYLILAA---V-AAVAA-GL------------FWR-LLIASLVMLIAGYLGE---V------G--G-----------A----------------------DG---DMLWIW-FIIGMAGWIYILYEI-----F--A-GEASKINAS--E-GTNAS-K-T-A-F-N-AL-KWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_DQ203773 [unk-Proteo2-b] SS114a0E9_env_samples_DQ203773 gi|77547994|gb|DQ203773| Uncultured bacterium clone SS114a0E9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0E9 predicted proteorhodopsin gene, partial cds DQ203773 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGATTGGCTGCTAACTGTTCCTCTACAAATAGTTGAGTTTTATCTCATATTGGCTGCAGTCGCGGCGGTAGCAGCTGGATTATTCTGGCGATTGCTGATCGCATCCCTTGTGATGTTGATAGCTGGTTATCTAGGCGAAGTTGGCGGCGCAGATGGTGATATGTTGTGGATTTGGTTCATCATTGGAATGGCCGGTTGGATTTATATCCTTTATGAAATCTTTGCTGGTGAAGCTAGTAAGATCAATGCAAGTGAAGGAACAAATGCATCAAAAACAGCATTTAATGCACTCAAATGGATCGTTACCATAGGGTGGGCCATTTATCCA RYIDWLLTVPLQIVEFYLILAAVAAVAAGLFWRLLIASLVMLIAGYLGEVGGADGDMLWIWFIIGMAGWIYILYEIFAGEASKINASEGTNASKTAFNALKWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGATTGG------------------------CTGCTAACTGTTCCTCTACAAATAGTTGAGTTTTATCTCATATTGGCTGCA---------GTC---GCGGCGGTAGCAGCT---GGATTA------------------------------------TTCTGGCGA---TTGCTGATCGCATCCCTTGTGATGTTGATAGCTGGTTATCTAGGCGAA---------GTT------------------GGC------GGC---------------------------------GCA------------------------------------------------------------------GATGGT---------GATATGTTGTGGATTTGG---TTCATCATTGGAATGGCCGGTTGGATTTATATCCTTTATGAAATC---------------TTT------GCT---GGTGAAGCTAGTAAGATCAATGCAAGT------GAA---GGAACAAATGCATCA---AAA---ACA---GCA---TTT---AAT---GCACTC---AAATGGATCGTTACCATA---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQIVEFYLILAA---V-AAVAA-GL------------FWR-LLIASLVMLIAGYLGE---V------G--G-----------A----------------------DG---DMLWIW-FIIGMAGWIYILYEI-----F--A-GEASKINAS--E-GTNAS-K-T-A-F-N-AL-KWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_DQ339389 [unk-Proteo2-b] clone_S-S4OM-F12_DQ339389 gi|85681749|gb|DQ339389| Uncultured bacterium clone S-S4OM-F12 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-F12 predicted proteorhodopsin gene, partial cds. DQ339389 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGATTGGCTGCTAACTGTTCCTCTACAAATAGTTGAGTTTTATCTCATATTGGCTGCAGTCGCGGCGGTAGCAGCTGGATTATTCTGGCGATTGCTGATCGCATCCCTTGTGATGTTGATAGCTGGTTATCTAGGCGAAGTTGGCGGCGCAGATGGTGATATGTTGTGGATTTGGTTCATCATTGGAATGGCCGGTTGGATTTATATCCTTTATGAAATCTTTGCTGGTGAAGCTAGTAAGATCAATGCAAGTGAAGGAACAAATGCATCAAAAACAGCATTTAATGCACTCAAATGGATCGTTACCATAGGGTGGGCCATCTATCCA RYIDWLLTVPLQIVEFYLILAAVAAVAAGLFWRLLIASLVMLIAGYLGEVGGADGDMLWIWFIIGMAGWIYILYEIFAGEASKINASEGTNASKTAFNALKWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGATTGG------------------------CTGCTAACTGTTCCTCTACAAATAGTTGAGTTTTATCTCATATTGGCTGCA---------GTC---GCGGCGGTAGCAGCT---GGATTA------------------------------------TTCTGGCGA---TTGCTGATCGCATCCCTTGTGATGTTGATAGCTGGTTATCTAGGCGAA---------GTT------------------GGC------GGC---------------------------------GCA------------------------------------------------------------------GATGGT---------GATATGTTGTGGATTTGG---TTCATCATTGGAATGGCCGGTTGGATTTATATCCTTTATGAAATC---------------TTT------GCT---GGTGAAGCTAGTAAGATCAATGCAAGT------GAA---GGAACAAATGCATCA---AAA---ACA---GCA---TTT---AAT---GCACTC---AAATGGATCGTTACCATA---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQIVEFYLILAA---V-AAVAA-GL------------FWR-LLIASLVMLIAGYLGE---V------G--G-----------A----------------------DG---DMLWIW-FIIGMAGWIYILYEI-----F--A-GEASKINAS--E-GTNAS-K-T-A-F-N-AL-KWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ926223 [unk-Proteo2-b] RHOMEO_AG_OTU4 gb|KJ926223| Uncultured bacterium cloneRHOMEO AG OTU4 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU4 putative proteorhodopsin gene, partial cds KJ926223 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGCTTTTAACTGTCCCTCTTCAAATAGTTGAGTTTTATCTAATATTGGCTGCAGTAGCGGCGGTAGCAGCTGGACTATTCTGGCGGCTGCTTATCGGATCGCTCGTGATGTTGATAGCCGGCTATTTAGGTGAAGTTGGCGGCGCAGATAGTGGTATGGTCTGGATTTGGTTCGCCATTGGAATGGCCGGTTGGCTTTATATCCTTTATGAAATCTTTGCCGGAGAAGCTAGCAAGATCAATGCAAGTGAAGGAACAAATGCATCAAAGACAGCTTTTAATGCTCTCAAATGGATCGTTACCATA WLLTVPLQIVEFYLILAAVAAVAAGLFWRLLIGSLVMLIAGYLGEVGGADSGMVWIWFAIGMAGWLYILYEIFAGEASKINASEGTNASKTAFNALKWIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTTTTAACTGTCCCTCTTCAAATAGTTGAGTTTTATCTAATATTGGCTGCA---------GTA---GCGGCGGTAGCAGCT---GGACTA------------------------------------TTCTGGCGG---CTGCTTATCGGATCGCTCGTGATGTTGATAGCCGGCTATTTAGGTGAA---------GTT------------------GGC------GGC---------------------------------GCA------------------------------------------------------------------GATAGT---------GGTATGGTCTGGATTTGG---TTCGCCATTGGAATGGCCGGTTGGCTTTATATCCTTTATGAAATC---------------TTT------GCC---GGAGAAGCTAGCAAGATCAATGCAAGT------GAA---GGAACAAATGCATCA---AAG---ACA---GCT---TTT---AAT---GCTCTC---AAATGGATCGTTACCATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLQIVEFYLILAA---V-AAVAA-GL------------FWR-LLIGSLVMLIAGYLGE---V------G--G-----------A----------------------DS---GMVWIW-FAIGMAGWLYILYEI-----F--A-GEASKINAS--E-GTNAS-K-T-A-F-N-AL-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_1105085968089 [unk-Proteo2-b] JCVI_ORF_1105085968089_GS016_Coastal_Sea_2m jcvi|1105085968089| 1105085968089 JCVI ORF 1105085968089 1105085968089 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 08-janv-04 Coastal_Sea/2m_depth/S_35.8_psu/GS016/Gulf_of_Mexico/Caribbean_Sea Caribbean Sea marine 24.174723 -84.344444 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAACATGGATAAATCATTAATGCTAAATCCAGCGGACTACGTAGGAGTTTCCTTCTGGATTATCTCAGCTGCAATGGTAGCTGCGACCTACTTTTTCTACGTGGAACGTGACAGAGCAATAGGTAAATGGAAGACATCACTAACAGTAGCCGCAATGGTAACAGGTATTGCTGCTATCCACTACTTCTATATGCGAGAAGTTTGGGTTGCCACAGGTGAGTCCCCAATAGTCTTTAGATATGTTGACTGGCTATTGACTGTTCCTCTGCAAATAGTCGAGTTTTATTTGATATTAGCCGCAGTTGCAGCGGTGGCTGCTGCTTTATTCTGGCGCCTCTTGATCGCTTCACTTGTGATGCTAATCGCAGGATACTTGGGTGAAGTAGGTGGACAGGATGGGTCTGGCCTATGGATCTACTTTATCATTGGAATGGCCGGATGGTTGTATATCCTGTATGAAATTTTTGCTGGCGAGGCGAGCAAAATAAATGCTAGCGAGGGCACCAACGCCTCGAAAACGGCATTCAACGCTCTGAAATGGATTGTAACGGTTGGATGGGCAATTTATCCAATAGGTTATGTTTGGGGCTACGCCGGAGGCGGAGACGCAGAAGCATTAAACATTATCTACAACCTAGCTGATTTTATTAATAAAATAGCTTTTGGTGTAGTGATTTGGGTGGCAGCAACTTCACCTGAATCAAATAAA MNMDKSLMLNPADYVGVSFWIISAAMVAATYFFYVERDRAIGKWKTSLTVAAMVTGIAAIHYFYMREVWVATGESPIVFRYVDWLLTVPLQIVEFYLILAAVAAVAAALFWRLLIASLVMLIAGYLGEVGGQDGSGLWIYFIIGMAGWLYILYEIFAGEASKINASEGTNASKTAFNALKWIVTVGWAIYPIGYVWGYAGGGDAEALNIIYNLADFINKIAFGVVIWVAATSPESNK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAACATGGATAAATCATTAATGCTAAATCCAGCGGACTACGTAGGAGTTTCCTTCTGGATTATCTCAGCTGCAATGGTAGCTGCGACCTACTTTTTCTACGTGGAACGTGACAGAGCAATAGGTAAATGGAAGACATCACTAACAGTAGCCGCAATGGTAACAGGTATTGCTGCTATCCACTAC------------------TTCTATATGCGAGAAGTTTGGGTTGCCACAGGTGAGTCCCCAATAGTCTTTAGATATGTTGACTGG------------------------CTATTGACTGTTCCTCTGCAAATAGTCGAGTTTTATTTGATATTAGCCGCA---------GTT---GCAGCGGTGGCTGCT---GCTTTA------------------------------------TTCTGGCGC---CTCTTGATCGCTTCACTTGTGATGCTAATCGCAGGATACTTGGGTGAA---------GTA------------------GGT------GGA---------------------------------CAG------------------------------------------------------------------GATGGG---------TCTGGCCTATGGATCTAC---TTTATCATTGGAATGGCCGGATGGTTGTATATCCTGTATGAAATT---------------TTT------GCT---GGCGAGGCGAGCAAAATAAATGCTAGC------GAG---GGCACCAACGCCTCG---AAA---ACG---GCA---TTC---AAC---GCTCTG---AAATGGATTGTAACGGTT---------------------------------------------------------------GGATGG---------GCAATTTATCCAATAGGTTATGTTTGGGGCTACGCCGGA---GGCGGA---------GAC---GCAGAAGCATTAAACATTATCTACAACCTAGCTGATTTTATTAATAAAATAGCTTTTGGTGTAGTGATTTGGGTGGCAGCAACTTCACCTGAATCAAATAAA--------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------MNMDKSLMLNPADYVGVSFWIISAAMVAATYFFYVERDRAIGKWKTSLTVAAMVTGIAAIHY------FYMREVWVATGESPIVFRYVDW--------LLTVPLQIVEFYLILAA---V-AAVAA-AL------------FWR-LLIASLVMLIAGYLGE---V------G--G-----------Q----------------------DG---SGLWIY-FIIGMAGWLYILYEI-----F--A-GEASKINAS--E-GTNAS-K-T-A-F-N-AL-KWIVTV---------------------GW---AIYPIGYVWGYAG-GG---D-AEALNIIYNLADFINKIAFGVVIWVAATSPESNK----------------------------------------------- [unk-Proteo2-b]_1112709850111 [unk-Proteo2-b] JCVI_ORF_1112709850111_GS119_Open_Ocean_2m jcvi|1112709850111| 1112709850111 JCVI ORF 1112709850111 1112709850111 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 26-sept-05 Open_Ocean/2m_depth/S_35.4_psu/GS119/International_Water_Outside_of_Reunion_Island/Indian_Ocean Indian Ocean marine -23.21611 52.30611 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAACATGGATAAATCATTAATGCTAAATCCAGCGGACTACGTAGGAGTTTCCTTCTGGATTATCTCAGCTGCAATGGTAGCTGCGACCTATTTTTTCTACGTAGAACGTGACAGAGCAATAGGTAAATGGAAGACATCGCTAACCGTAGCAGCAATGGTGACAGGTATTGCCGCTATCCACTACTTCTATATGCGAGAAGTTTGGGTTGCTACCGGTGAGTCCCCGATAGTCTTTAGGTATGTTGACTGGCTATTGACTGTTCCTCTACAGATAGTCGAATTTTATTTAATATTAGCCGCAGTTGCAGCGGTAGCTGCTGCTTTATTCTGGCGCCTTTTGATCGCCTCACTTGTAATGTTGATTGCAGGTTACTTGGGTGAAGTAGGTGGACAGGATGGGTCCGGCCTTTGGATCTACTTTATCATTGGAATGGCAGGATGGTTGTATATCCTGTACGAAATTTTTGCCGGCGAGGCGAGCAAAATTAATGCTAGTGAGGGCACCAACGCCTCGAAAACTGCATTCAACGCTCTTAAGTGGATTGTAACAGTTGGATGGGCAATCTATCCAATAGGTTATGTTTGGGGCTACGCCGGAGGCGGAGATGCAGAAGCGTTAAACATTATCTACAACCTAGCTGATTTTATAAATAAAATAGCATTTGGTGTAGTGATTTGGGTGGCAGCAACTTCACCTGAATCAAATAAA MNMDKSLMLNPADYVGVSFWIISAAMVAATYFFYVERDRAIGKWKTSLTVAAMVTGIAAIHYFYMREVWVATGESPIVFRYVDWLLTVPLQIVEFYLILAAVAAVAAALFWRLLIASLVMLIAGYLGEVGGQDGSGLWIYFIIGMAGWLYILYEIFAGEASKINASEGTNASKTAFNALKWIVTVGWAIYPIGYVWGYAGGGDAEALNIIYNLADFINKIAFGVVIWVAATSPESNK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAACATGGATAAATCATTAATGCTAAATCCAGCGGACTACGTAGGAGTTTCCTTCTGGATTATCTCAGCTGCAATGGTAGCTGCGACCTATTTTTTCTACGTAGAACGTGACAGAGCAATAGGTAAATGGAAGACATCGCTAACCGTAGCAGCAATGGTGACAGGTATTGCCGCTATCCACTAC------------------TTCTATATGCGAGAAGTTTGGGTTGCTACCGGTGAGTCCCCGATAGTCTTTAGGTATGTTGACTGG------------------------CTATTGACTGTTCCTCTACAGATAGTCGAATTTTATTTAATATTAGCCGCA---------GTT---GCAGCGGTAGCTGCT---GCTTTA------------------------------------TTCTGGCGC---CTTTTGATCGCCTCACTTGTAATGTTGATTGCAGGTTACTTGGGTGAA---------GTA------------------GGT------GGA---------------------------------CAG------------------------------------------------------------------GATGGG---------TCCGGCCTTTGGATCTAC---TTTATCATTGGAATGGCAGGATGGTTGTATATCCTGTACGAAATT---------------TTT------GCC---GGCGAGGCGAGCAAAATTAATGCTAGT------GAG---GGCACCAACGCCTCG---AAA---ACT---GCA---TTC---AAC---GCTCTT---AAGTGGATTGTAACAGTT---------------------------------------------------------------GGATGG---------GCAATCTATCCAATAGGTTATGTTTGGGGCTACGCCGGA---GGCGGA---------GAT---GCAGAAGCGTTAAACATTATCTACAACCTAGCTGATTTTATAAATAAAATAGCATTTGGTGTAGTGATTTGGGTGGCAGCAACTTCACCTGAATCAAATAAA--------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------MNMDKSLMLNPADYVGVSFWIISAAMVAATYFFYVERDRAIGKWKTSLTVAAMVTGIAAIHY------FYMREVWVATGESPIVFRYVDW--------LLTVPLQIVEFYLILAA---V-AAVAA-AL------------FWR-LLIASLVMLIAGYLGE---V------G--G-----------Q----------------------DG---SGLWIY-FIIGMAGWLYILYEI-----F--A-GEASKINAS--E-GTNAS-K-T-A-F-N-AL-KWIVTV---------------------GW---AIYPIGYVWGYAG-GG---D-AEALNIIYNLADFINKIAFGVVIWVAATSPESNK----------------------------------------------- [unk-Proteo2-b]_KJ926109 [unk-Proteo2-b] BOUM_OTU022_env_samples gb|KJ926109| Uncultured bacterium clone BOUM OTU022 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU022 putative proteorhodopsin gene, partial cds KJ926109 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 34.046 24.49733 #na #na #na #na #na ATAGACTGGCTTTTGACTGTTCCTCTGCAAATAGTTGAGTTTTATTTAATACTCGCTGCCGTCGCAGCAGTAGCCGCTGGTTTGTTCTGGCGCCTTCTAATCGCTTCTCTTGTAATGTTAATTGCAGGATACTTGGGCGAAGTTGGTGGCCAAGATGGGTCCGGGCTTTGGATCTGTTTCTTCATCGGAATGGCGGGATGGCTTTATATCCTGTACGAAATTTTTGCTGGCGAAGCGAGCAAAATTAACGCCAGTGAGGGAACTAACGCGTCAAAAACAGCGTTTAGTGCTCTCAGATTGATCGTAACAGTGGGATGGGCTATATAC IDWLLTVPLQIVEFYLILAAVAAVAAGLFWRLLIASLVMLIAGYLGEVGGQDGSGLWICFFIGMAGWLYILYEIFAGEASKINASEGTNASKTAFSALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAGACTGG------------------------CTTTTGACTGTTCCTCTGCAAATAGTTGAGTTTTATTTAATACTCGCTGCC---------GTC---GCAGCAGTAGCCGCT---GGTTTG------------------------------------TTCTGGCGC---CTTCTAATCGCTTCTCTTGTAATGTTAATTGCAGGATACTTGGGCGAA---------GTT------------------GGT------GGC---------------------------------CAA------------------------------------------------------------------GATGGG---------TCCGGGCTTTGGATCTGT---TTCTTCATCGGAATGGCGGGATGGCTTTATATCCTGTACGAAATT---------------TTT------GCT---GGCGAAGCGAGCAAAATTAACGCCAGT------GAG---GGAACTAACGCGTCA---AAA---ACA---GCG---TTT---AGT---GCTCTC---AGATTGATCGTAACAGTG---------------------------------------------------------------GGATGG---------GCTATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDW--------LLTVPLQIVEFYLILAA---V-AAVAA-GL------------FWR-LLIASLVMLIAGYLGE---V------G--G-----------Q----------------------DG---SGLWIC-FFIGMAGWLYILYEI-----F--A-GEASKINAS--E-GTNAS-K-T-A-F-S-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_1105113207132 [unk-Proteo2-b] JCVI_ORF_1105113207132_GS000b_Open_Ocean_5m jcvi|1105113207132| 1105113207132 JCVI ORF 1105113207132 1105113207132 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.22_0.8 other #na 26-FEB-2003 Open_Ocean/5m_depth/S_36.7_psu/GS000b/Sargasso_Station_11/Sargasso_Sea Sargasso Sea marine 31.175 -64.32433 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATTTTAAAAGGGAGAACTATTATGACAACAGGAGCACTCAATCCAGCTGATTACGTCGGCGTAAGTTTCTGGATTATATCTGCAGCTATGGTTGCAGCAACATTCTTTTTCTGGGTAGAAAGAGATCGCGCAGTTGGTAAATGGAAAACATCTCTAACTGTAGCCGCAATGGTTACAGGTATTGCTGCCATCCACTATTTCTACATGCGTGATGTTTGGGTTAGCACAGGCGAGTCCCCAATCGTATTCCGATATGTAGACTGGCTGTTAACCGTACCACTACAAATTGTTGAATTCTACTTAATACTAGCAGCTATTGCTGTGGTTGCAGCGTCACTATTCTGGCGTCTGCTCATCGCATCAGTTGTAATGCTAGTTGCCGGTTATCTCGGTGAAGTAGGTGCAATGAATGTCTGGCTTGCGTTCATCATCGGAATGGCAGGTTGGATCTACATCATTTACGAAATATTTGCTGGTGAAGCAAGTCAAATTAGTGCAAGTGATGGTACCCCAGCATCTCAACGAGCATTTAATGCTTTGAGAATCATAGTAACAGTCGGTTGGGCGATTTACCCACTTGGCTATGTACTTGGTTACGCTGGTGCCGGAAGTGCAGATGCGCTCAACATCATATACAACCTTGCTGATTTTGTTAATAAAATCGCATTCGGTGTTGTTATATGGGTTGCTGCTACCTCTGACGCAAAA ILKGRTIMTTGALNPADYVGVSFWIISAAMVAATFFFWVERDRAVGKWKTSLTVAAMVTGIAAIHYFYMRDVWVSTGESPIVFRYVDWLLTVPLQIVEFYLILAAIAVVAASLFWRLLIASVVMLVAGYLGEVGAMNVWLAFIIGMAGWIYIIYEIFAGEASQISASDGTPASQRAFNALRIIVTVGWAIYPLGYVLGYAGAGSADALNIIYNLADFVNKIAFGVVIWVAATSDAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAAAAGGGAGAACTATTATGACAACAGGAGCACTCAATCCAGCTGATTACGTCGGCGTAAGTTTCTGGATTATATCTGCAGCTATGGTTGCAGCAACATTCTTTTTCTGGGTAGAAAGAGATCGCGCAGTTGGT---AAATGGAAAACATCTCTAACTGTAGCCGCAATGGTTACAGGTATTGCTGCCATCCACTATTTCTACATGCGTGATGTTTGGGTT------------------------------AGCACA---------------------GGCGAGTCCCCAATCGTATTCCGATATGTAGACTGG------------------------CTGTTAACCGTACCACTACAAATTGTTGAATTCTACTTAATACTAGCAGCT---------ATT---GCTGTGGTTGCAGCG---TCACTA------------------------------------TTCTGGCGT---CTGCTCATCGCATCAGTTGTAATGCTAGTTGCCGGTTATCTCGGTGAA---------GTA------------------GGT------GCA---------------------------------ATG------------------------------------------------------------------AATGTC------------------TGGCTTGCG---TTCATCATCGGAATGGCAGGTTGGATCTACATCATTTACGAAATA---------------TTT------GCT---GGTGAAGCAAGTCAAATTAGTGCAAGT------GAT---GGTACCCCAGCATCT---CAA---CGA---GCA---TTT---AAT---GCTTTG---AGAATCATAGTAACAGTC---------------------------------------------------------------GGTTGG---------GCGATTTACCCACTTGGCTATGTACTTGGTTACGCTGGT---GCCGGA---------------------------AGT---GCA---------GATGCGCTCAACATCATATACAACCTTGCTGATTTTGTTAATAAAATCGCATTCGGTGTTGTTATATGGGTTGCTGCTACCTCTGAC---GCAAAA--------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------ILKGRTIMTTGALNPADYVGVSFWIISAAMVAATFFFWVERDRAVG-KWKTSLTVAAMVTGIAAIHYFYMRDVWV----------ST-------GESPIVFRYVDW--------LLTVPLQIVEFYLILAA---I-AVVAA-SL------------FWR-LLIASVVMLVAGYLGE---V------G--A-----------M----------------------NV------WLA-FIIGMAGWIYIIYEI-----F--A-GEASQISAS--D-GTPAS-Q-R-A-F-N-AL-RIIVTV---------------------GW---AIYPLGYVLGYAG-AG---------S-A---DALNIIYNLADFVNKIAFGVVIWVAATSD-AK--------------------------------------- [unk-Proteo2-b]_DQ062264 [unk-Proteo2-b] MEDPR46D6_env_samples_DQ062264 gi|67483473|gb|DQ062264| Uncultured bacterium clone MEDPR46D6 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR46D6 proteorhodopsin gene, partial cds DQ062264 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na AGGTACATAGATTGGCTGTTAACCGTACCACTTCAAATTGTTGAATTCTACTTAATACTAGCAGCTATTGCTGTGGTTGCAGCGTCACTATTCTGGCGTCTGCTCATCGCATCAGTTGTAATGCTAGTTGCCGGTTATCTCGGTGAAGTAGGTGCAATGAATGTCTGGCTTGCGTTCATCATCGGAATGGCAGGTTGGATCTACATCATTTACGAAATATTTGCTGGTGAAGCAAGTAAAATTAGTGCAAGTGATGGTACACCAGCATCTCAACGAGCATTTAATGCTTTGAGAATCATAGTAACAGTCGGGTGGGCCATATATCCA RYIDWLLTVPLQIVEFYLILAAIAVVAASLFWRLLIASVVMLVAGYLGEVGAMNVWLAFIIGMAGWIYIIYEIFAGEASKISASDGTPASQRAFNALRIIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATAGATTGG------------------------CTGTTAACCGTACCACTTCAAATTGTTGAATTCTACTTAATACTAGCAGCT---------ATT---GCTGTGGTTGCAGCG---TCACTA------------------------------------TTCTGGCGT---CTGCTCATCGCATCAGTTGTAATGCTAGTTGCCGGTTATCTCGGTGAA---------GTA------------------GGT------GCA---------------------------------ATG------------------------------------------------------------------AATGTC------------------TGGCTTGCG---TTCATCATCGGAATGGCAGGTTGGATCTACATCATTTACGAAATA---------------TTT------GCT---GGTGAAGCAAGTAAAATTAGTGCAAGT------GAT---GGTACACCAGCATCT---CAA---CGA---GCA---TTT---AAT---GCTTTG---AGAATCATAGTAACAGTC---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQIVEFYLILAA---I-AVVAA-SL------------FWR-LLIASVVMLVAGYLGE---V------G--A-----------M----------------------NV------WLA-FIIGMAGWIYIIYEI-----F--A-GEASKISAS--D-GTPAS-Q-R-A-F-N-AL-RIIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ926131 [unk-Proteo2-a] BOUM_OTU044_env_samples gb|KJ926131| Uncultured bacterium clone BOUM OTU044 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU044 putative proteorhodopsin gene, partial cds KJ926131 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 43.4235 7.8533 #na #na #na #na #na ATTGACTGGCTCTTAACTGTGCCACTCCAAATCATCGAATTCTTCCTGATCCTGTCAGCAATCGCTGTAGTCAGTACAACATTGTTCTGGCGCTTGCTCATCGCATCAGTGGTCATGCTGGTCGCCGGATATCTCGGCGAGGTCGAACAAGGCGGCATGCTCTGGCCGATGTTCACCTTGGGCATGCTTGCGTGGATTTATATCATCTACGAGATCTTCGCGGGTGAAGCGAGTAAGATCAACGAAAACTCTGGAACGGTAGCATCGAAGAAGGCGTTTCATGCGCTTCGCCTAATCGTTACTGTCGGCTGGGCGATTTAC IDWLLTVPLQIIEFFLILSAIAVVSTTLFWRLLIASVVMLVAGYLGEVEQGGMLWPMFTLGMLAWIYIIYEIFAGEASKINENSGTVASKKAFHALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGACTGG------------------------CTCTTAACTGTGCCACTCCAAATCATCGAATTCTTCCTGATCCTGTCAGCA---------ATC---GCTGTAGTCAGTACA---ACATTG------------------------------------TTCTGGCGC---TTGCTCATCGCATCAGTGGTCATGCTGGTCGCCGGATATCTCGGCGAG---------GTC------------------GAA------CAA---------------------------------GGC---------------------------------------------------------------------------------GGCATGCTCTGGCCGATG---TTCACCTTGGGCATGCTTGCGTGGATTTATATCATCTACGAGATC---------------TTC------GCG---GGTGAAGCGAGTAAGATCAACGAAAAC------TCT---GGAACGGTAGCATCG---AAG---AAG---GCG---TTT---CAT---GCGCTT---CGCCTAATCGTTACTGTC---------------------------------------------------------------GGCTGG---------GCGATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDW--------LLTVPLQIIEFFLILSA---I-AVVST-TL------------FWR-LLIASVVMLVAGYLGE---V------E--Q-----------G---------------------------GMLWPM-FTLGMLAWIYIIYEI-----F--A-GEASKINEN--S-GTVAS-K-K-A-F-H-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ926130 [unk-Proteo2-a] BOUM_OTU043_env_samples gb|KJ926130| Uncultured bacterium clone BOUM OTU043 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU043 putative proteorhodopsin gene, partial cds KJ926130 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 33.709667 32.644667 #na #na #na #na #na ATCGATTGGCTGCTTACAGTTCCACTTCAAATTATTGAGTTCTTCTTAATTCTTTCCGCGATTGCTGTGGTTCGCGCTGCACTCTTCTGGAAACTTCTGGTCGCATCACTGGTTATGCTGGTGACCGGCTATCTCGGTGAAGTTGAACAGGGTTCGCTGCTCTGGCCGATGTTCATTATCGGTTGTCTGGCCTGGTTCTACATCATTTATGAAATCTTTGCCGGTGAGGCGAGCCAGATTAATGCGAACGAAGGCACAGAAGCATCAAAGAAAGCTTTCGGCGCTCTTCGTCTGATTGTGACGATTGGGTGGGCTATATAC IDWLLTVPLQIIEFFLILSAIAVVRAALFWKLLVASLVMLVTGYLGEVEQGSLLWPMFIIGCLAWFYIIYEIFAGEASQINANEGTEASKKAFGALRLIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCGATTGG------------------------CTGCTTACAGTTCCACTTCAAATTATTGAGTTCTTCTTAATTCTTTCCGCG---------ATT---GCTGTGGTTCGCGCT---GCACTC------------------------------------TTCTGGAAA---CTTCTGGTCGCATCACTGGTTATGCTGGTGACCGGCTATCTCGGTGAA---------GTT------------------GAA------CAG---------------------------------GGT---------------------------------------------------------------------------------TCGCTGCTCTGGCCGATG---TTCATTATCGGTTGTCTGGCCTGGTTCTACATCATTTATGAAATC---------------TTT------GCC---GGTGAGGCGAGCCAGATTAATGCGAAC------GAA---GGCACAGAAGCATCA---AAG---AAA---GCT---TTC---GGC---GCTCTT---CGTCTGATTGTGACGATT---------------------------------------------------------------GGGTGG---------GCTATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDW--------LLTVPLQIIEFFLILSA---I-AVVRA-AL------------FWK-LLVASLVMLVTGYLGE---V------E--Q-----------G---------------------------SLLWPM-FIIGCLAWFYIIYEI-----F--A-GEASQINAN--E-GTEAS-K-K-A-F-G-AL-RLIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ926108 [unk-Proteo2-a] BOUM_OTU021_env_samples gb|KJ926108| Uncultured bacterium clone BOUM OTU021 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU021 putative proteorhodopsin gene, partial cds KJ926108 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump E97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 38.6308 7.9097 #na #na #na #na #na ATAGAGTGGCTGCTGACGGTGCCCCTGCAGATCGTCGAATTCTGCCTTATCTTGGCGGCGATGACTGCAGTCGCTACAGGGCTATTCTGGCGTTTGTTGATCGCCTCTCTGGTGATGTTGATCGCCGGTTATCTTGGCGAAGTGAATGCCGGGAATGCTACTGCGCTCTGGGTACTGTTTATTATCGGTATGGCTGGATGGATTTACATCATCTACGAGGTTTTCGCCGGTGAAGCCAGCCGCATCAATGCTAGCGAAGGCACCGTTGCCGGACAGAAAGCGTTTAACGCGCTGCGCCTGATCGTCACCGTCGGGTGGGCTATCTAT IEWLLTVPLQIVEFCLILAAMTAVATGLFWRLLIASLVMLIAGYLGEVNAGNATALWVLFIIGMAGWIYIIYEVFAGEASRINASEGTVAGQKAFNALRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAGAGTGG------------------------CTGCTGACGGTGCCCCTGCAGATCGTCGAATTCTGCCTTATCTTGGCGGCG---------ATG---ACTGCAGTCGCTACA---GGGCTA------------------------------------TTCTGGCGT---TTGTTGATCGCCTCTCTGGTGATGTTGATCGCCGGTTATCTTGGCGAA---------GTG------------------AAT------GCC---------------------------------GGG------------------------------------------------------------------AATGCT---------ACTGCGCTCTGGGTACTG---TTTATTATCGGTATGGCTGGATGGATTTACATCATCTACGAGGTT---------------TTC------GCC---GGTGAAGCCAGCCGCATCAATGCTAGC------GAA---GGCACCGTTGCCGGA---CAG---AAA---GCG---TTT---AAC---GCGCTG---CGCCTGATCGTCACCGTC---------------------------------------------------------------GGGTGG---------GCTATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IEW--------LLTVPLQIVEFCLILAA---M-TAVAT-GL------------FWR-LLIASLVMLIAGYLGE---V------N--A-----------G----------------------NA---TALWVL-FIIGMAGWIYIIYEV-----F--A-GEASRINAS--E-GTVAG-Q-K-A-F-N-AL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_DQ422228 [unk-Proteo2-a] clone_med-0m-g7_DQ422228 gi|90023976|gb|DQ422228| Uncultured bacterium clone med-0m-g7 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-g7 putative proteorhodopsin gene, partial cds. DQ422228 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTATTAACAGTGCCACTTCAAATGGTTGAGTTCTACCTGATCCTCGCAGCTGTAACCGCTGTCTCAGTAGGCGTTTTTTGGAGACTTTTAATCGCTTCGACCATTATGTTGGTTGCAGGGTTTATCGGGGAACAAAATGTGGCAGGTTCGGCAGCTAACATCGGATGGTGGGTAGTTGGAATGATTGCTTGGCTATATATGTTAAAAGAACTCTTTACGGGTGAAGCAGCTAGAATGAGTGCGGAAAGCTCAAATGCTAGCTTGCAAACCGCTTTTAACGCCATGCGATTAATTGTAACTGTGGGTTGGGCTATTTATCCA RYIDWLLTVPLQMVEFYLILAAVTAVSVGVFWRLLIASTIMLVAGFIGEQNVAGSAANIGWWVVGMIAWLYMLKELFTGEAARMSAESSNASLQTAFNAMRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTATTAACAGTGCCACTTCAAATGGTTGAGTTCTACCTGATCCTCGCAGCT---------GTA---ACCGCTGTCTCAGTA---GGCGTT------------------------------------TTTTGGAGA---CTTTTAATCGCTTCGACCATTATGTTGGTTGCAGGGTTTATCGGGGAA---------CAA------------------AAT------GTGGCA------------------------GGTTCGGCA------------------------------------------------------------------GCTAAC------------------ATCGGATGG---TGGGTAGTTGGAATGATTGCTTGGCTATATATGTTAAAAGAACTC---------------TTT------ACG---GGTGAAGCAGCTAGAATGAGTGCGGAA------AGC---TCAAATGCTAGCTTG---CAA---ACC---GCT---TTT---AAC---GCCATG---CGATTAATTGTAACTGTG---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQMVEFYLILAA---V-TAVSV-GV------------FWR-LLIASTIMLVAGFIGE---Q------N--VA--------GSA----------------------AN------IGW-WVVGMIAWLYMLKEL-----F--T-GEAARMSAE--S-SNASL-Q-T-A-F-N-AM-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_DQ422231 [unk-Proteo2-a] clone_med-0m-h1_DQ422231 gi|90023982|gb|DQ422231| Uncultured bacterium clone med-0m-h1 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-h1 putative proteorhodopsin gene, partial cds. DQ422231 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTATTAACAGTGCCACTTCAAATGGTTGAGTTCTACCTGATCCTCGCAGCTGTAACCGCTGTTTCAGTAGGCGTTTTTTGGAGACTTTTAATCGCTTCGACCATTATGTTGGTTGCAGGGTTTATCGGGGAACAAAATGTGGCAGGTTCGGCAGCTAACATCGGATGGTGGGTAGTTGGAATGATTGCTTGGCTATATATGTTAAAAGAACTCTTTACGGGTGAAGCAGCTAGAATGAGTGCGGAAAGCTCAAATGCTAGCTTGCAAACCGCTTTTAACGCCATGCGATTAATTGTAACTGTGGGTTGGGCTATTTATCCA RYIDWLLTVPLQMVEFYLILAAVTAVSVGVFWRLLIASTIMLVAGFIGEQNVAGSAANIGWWVVGMIAWLYMLKELFTGEAARMSAESSNASLQTAFNAMRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTATTAACAGTGCCACTTCAAATGGTTGAGTTCTACCTGATCCTCGCAGCT---------GTA---ACCGCTGTTTCAGTA---GGCGTT------------------------------------TTTTGGAGA---CTTTTAATCGCTTCGACCATTATGTTGGTTGCAGGGTTTATCGGGGAA---------CAA------------------AAT------GTGGCA------------------------GGTTCGGCA------------------------------------------------------------------GCTAAC------------------ATCGGATGG---TGGGTAGTTGGAATGATTGCTTGGCTATATATGTTAAAAGAACTC---------------TTT------ACG---GGTGAAGCAGCTAGAATGAGTGCGGAA------AGC---TCAAATGCTAGCTTG---CAA---ACC---GCT---TTT---AAC---GCCATG---CGATTAATTGTAACTGTG---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQMVEFYLILAA---V-TAVSV-GV------------FWR-LLIASTIMLVAGFIGE---Q------N--VA--------GSA----------------------AN------IGW-WVVGMIAWLYMLKEL-----F--T-GEAARMSAE--S-SNASL-Q-T-A-F-N-AM-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ926136 [unk-Proteo2-a] BOUM_OTU049_env_samples gb|KJ926136| Uncultured bacterium clone BOUM OTU049 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU049 putative proteorhodopsin gene, partial cds KJ926136 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump E97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 34.185167 22.161 #na #na #na #na #na GTTGAGTGGATATTAACTGTCCCACTCCAAATCATTGAGTTCTATCTTATCTTAAGTGCTATTACTCGAGTCAAAGCATCCTTATTCTGGCGACTACTAGTGGCTTCAATTGTCATGCTAGTCTCAGGGTATATCGGCGAGGTCAATGCCACTCAACCATCCATCGTTTGGTATGGTTACGCTATCGGCATGTTAGCGTGGTTGTACATCATTTATGAGATATTCTTTGGCCAAGCTGCCAACCTGAATCAACAATACGGTACACATGCCTCGCGCATGGCATTCAACGCTATGAGATGGATTGTTACCATAGGTTGGGCAATCTAC VEWILTVPLQIIEFYLILSAITRVKASLFWRLLVASIVMLVSGYIGEVNATQPSIVWYGYAIGMLAWLYIIYEIFFGQAANLNQQYGTHASRMAFNAMRWIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGAGTGG------------------------ATATTAACTGTCCCACTCCAAATCATTGAGTTCTATCTTATCTTAAGTGCT---------ATT---ACTCGAGTCAAAGCA---TCCTTA------------------------------------TTCTGGCGA---CTACTAGTGGCTTCAATTGTCATGCTAGTCTCAGGGTATATCGGCGAG---------GTC------------------AAT------GCC---------------------------------ACT------------------------------------------------------------------CAACCA---------TCCATCGTTTGGTATGGT---TACGCTATCGGCATGTTAGCGTGGTTGTACATCATTTATGAGATA---------------TTC------TTT---GGCCAAGCTGCCAACCTGAATCAACAA------TAC---GGTACACATGCCTCG---CGC---ATG---GCA---TTC---AAC---GCTATG---AGATGGATTGTTACCATA---------------------------------------------------------------GGTTGG---------GCAATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VEW--------ILTVPLQIIEFYLILSA---I-TRVKA-SL------------FWR-LLVASIVMLVSGYIGE---V------N--A-----------T----------------------QP---SIVWYG-YAIGMLAWLYIIYEI-----F--F-GQAANLNQQ--Y-GTHAS-R-M-A-F-N-AM-RWIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ926110 [unk-Proteo2-a] BOUM_OTU023_env_samples gb|KJ926110| Uncultured bacterium clone BOUM OTU023 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU023 putative proteorhodopsin gene, partial cds KJ926110 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 33.709667 32.644667 #na #na #na #na #na GTAGACTGGTTACTTACAGTGCCACTTCAAATTATTGAATTTTACTTGATTTTAGCTGCAATTGCTGCAGTCGCGGCTTCTCTATTTTGGCGCCTTTTAATTGCGTCAGTGGTCATGCTTGTTGCGGGCTATCTTGGAGAAGTAAACGCTTCTGACTCAAATATGCTTTGGGTCTGCTTTGTAATAGGTCTGCTTGCATGGTTTTATATTATCCGGGAGATTTTTGTTGGTGAAGCCAGTGAAATAAATGCAAATTCTGGCACCGCAGCGTCCCAAGCAGCTTTCAAGGCGCTTCGGATGATTGTGACAGTCGGGTGGGCTATCTAC VDWLLTVPLQIIEFYLILAAIAAVAASLFWRLLIASVVMLVAGYLGEVNASDSNMLWVCFVIGLLAWFYIIREIFVGEASEINANSGTAASQAAFKALRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGACTGG------------------------TTACTTACAGTGCCACTTCAAATTATTGAATTTTACTTGATTTTAGCTGCA---------ATT---GCTGCAGTCGCGGCT---TCTCTA------------------------------------TTTTGGCGC---CTTTTAATTGCGTCAGTGGTCATGCTTGTTGCGGGCTATCTTGGAGAA---------GTA------------------AAC------GCT---------------------------------TCT------------------------------------------------------------------GACTCA---------AATATGCTTTGGGTCTGC---TTTGTAATAGGTCTGCTTGCATGGTTTTATATTATCCGGGAGATT---------------TTT------GTT---GGTGAAGCCAGTGAAATAAATGCAAAT------TCT---GGCACCGCAGCGTCC---CAA---GCA---GCT---TTC---AAG---GCGCTT---CGGATGATTGTGACAGTC---------------------------------------------------------------GGGTGG---------GCTATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LLTVPLQIIEFYLILAA---I-AAVAA-SL------------FWR-LLIASVVMLVAGYLGE---V------N--A-----------S----------------------DS---NMLWVC-FVIGLLAWFYIIREI-----F--V-GEASEINAN--S-GTAAS-Q-A-A-F-K-AL-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-Proteo2-Photobacterium]_AAOJ01000006 [unk-Proteo2-Photobacterium] Photobacterium_angustum_S14_1099604003197_genome_AAOJ01000006 gi|90438289|gb|AAOJ01000006| Photobacterium angustum S14 1099604003197, whole genome shotgun sequence Photobacterium angustum S14 1099604003197, whole genome shotgun sequence AAOJ01000006 [[proteorhodopsin/Proteobacterial-like cluster 2/Photobacterium Gammaproteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Photobacterium Gammaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/Proteobacteria/Gammaproteobacteria/Vibrionales/Vibrionaceae/Photobacterium] taxon:314292 genomic_DNA strain 24-mars-06 #na #na Tasman Sea marine -33.99 151.2 The genomic basis of trophic strategy in marine bacteria Lauro,F.M., McDougald,D., Thomas,T., Williams,T.J., Egan,S., Rice,S., DeMaere,M.Z., Ting,L., Ertan,H., Johnson,J., Ferriera,S., Lapidus,A., Anderson,I., Kyrpides,N., Munk,A.C., Detter,C., Han,C.S., Brown,M.V., Robb,F.T., Kjelleberg,S. and Cavicchioli,R. Proc. Natl. Acad. Sci. U.S.A. 106 (37), 1552715533 (2009) 19805210 #na ATGCTAAATCCTAGTGACTTTGTAGGAGTCAGCTTTTGGCTGATGTCAGCAGCCATGATGGCTGCCACGTTCTTTTTTTGGGTTGAGCGAGATAGGGTTGTTGGTAAGTGGAAAACATCCCTCTCGGTCGCGGCAATGGTAACGGGTATTGCTTGCCTTCACTACTTCTATATGCGAGGAGTGTGGGTTGAAACAGGGCAAAGCCCAACCGTATTTAGATATGTAGATTGGCTCCTCACTGTACCGCTTCAAATCATCGAATTCTTCCTCATTCTTGTCGTCATTGCTGTTGTTCCTACCTCTTTATTCTGGCGTTTACTCATTGCAAGTATTGTTATGCTTGTCGGTGGTTATCTTGGTGAGGTGGGTACCTTAAGTCCAATGGTTGGCTTTGTTATAGGTATGATTGGTTGGCTCTACATCATCTATGAAATTTTCATTGGCGAGGCGAGTACTATCAATGCAAATAGTGGTAATGAAGCCAGTCAAAGTGCTTTCAAAGCATTACGGCTTATCGTCACTATTGGTTGGTCAATTTATCCTATTGGCTATCTTGTTGGTTACTTTGGAGATGGCGGAAACGTTGCAATGCTTAATCTCATCTACAACCTTGCTGACTTTGTTAATAAGATTGCATTTGGTGTTGTTATTTGGGCGGCAGCAACAAGAGATGCAGACAACACAAGAGCT MLNPSDFVGVSFWLMSAAMMAATFFFWVERDRVVGKWKTSLSVAAMVTGIACLHYFYMRGVWVETGQSPTVFRYVDWLLTVPLQIIEFFLILVVIAVVPTSLFWRLLIASIVMLVGGYLGEVGTLSPMVGFVIGMIGWLYIIYEIFIGEASTINANSGNEASQSAFKALRLIVTIGWSIYPIGYLVGYFGDGGNVAMLNLIYNLADFVNKIAFGVVIWAAATRDADNTRA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTAAATCCTAGTGACTTTGTAGGAGTCAGCTTTTGGCTGATGTCAGCAGCCATGATGGCTGCCACGTTCTTTTTTTGGGTTGAGCGAGATAGGGTTGTTGGT---AAGTGGAAAACATCCCTCTCGGTCGCGGCAATGGTAACGGGTATTGCTTGCCTTCACTACTTCTATATGCGAGGAGTGTGGGTT------------------------------GAAACA---------------------GGGCAAAGCCCAACCGTATTTAGATATGTAGATTGG------------------------CTCCTCACTGTACCGCTTCAAATCATCGAATTCTTCCTCATTCTTGTCGTC---------ATT---GCTGTTGTTCCTACC---TCTTTA------------------------------------TTCTGGCGT---TTACTCATTGCAAGTATTGTTATGCTTGTCGGTGGTTATCTTGGTGAG---------GTG------------------GGT------ACC---------------------------------TTA------------------------------------------------------------------AGTCCA------------------ATGGTTGGC---TTTGTTATAGGTATGATTGGTTGGCTCTACATCATCTATGAAATT---------------TTC------ATT---GGCGAGGCGAGTACTATCAATGCAAAT------AGT---GGTAATGAAGCCAGT---CAA---AGT---GCT---TTC---AAA---GCATTA---CGGCTTATCGTCACTATT---------------------------------------------------------------GGTTGG---------TCAATTTATCCTATTGGCTATCTTGTTGGTTACTTTGGA---GATGGC---------------------------GGAAACGTT---------GCAATGCTTAATCTCATCTACAACCTTGCTGACTTTGTTAATAAGATTGCATTTGGTGTTGTTATTTGGGCGGCAGCAACAAGAGAT---GCAGACAACACAAGAGCT--------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------MLNPSDFVGVSFWLMSAAMMAATFFFWVERDRVVG-KWKTSLSVAAMVTGIACLHYFYMRGVWV----------ET-------GQSPTVFRYVDW--------LLTVPLQIIEFFLILVV---I-AVVPT-SL------------FWR-LLIASIVMLVGGYLGE---V------G--T-----------L----------------------SP------MVG-FVIGMIGWLYIIYEI-----F--I-GEASTINAN--S-GNEAS-Q-S-A-F-K-AL-RLIVTI---------------------GW---SIYPIGYLVGYFG-DG---------GNV---AMLNLIYNLADFVNKIAFGVVIWAAATRD-ADNTRA----------------------------------- [unk-Proteo2-Photobacterium]_AB572070 [unk-Proteo2-Photobacterium] Photobacterium_sp_LC1_200_complete_cds_AB572070 gi|379056203|gb|AB572070| Photobacterium sp LC1200 gene for proteorhodopsin, complete cds Photobacterium sp LC1200 gene for proteorhodopsin, complete cds AB572070 [[proteorhodopsin/Proteobacterial-like cluster 2/Photobacterium Gammaproteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Photobacterium Gammaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/Proteobacteria/Gammaproteobacteria/Vibrionales/Vibrionaceae/Photobacterium] taxon:866307 genomic_DNA strain 30-oct-13 2003 seawater Pacific Ocean marine 35.180567 139.368435 Anomalous pH Effect of Blue Proteorhodopsin Yamada,K., Kawanabe,A., Yoshizawa,S., Inoue,K., Kogure,K. and Kandori,H. J Phys Chem Lett 3, 800804 (2012) #na #na ATGCTAAATCCTAGTGACTTTGTAGGAGTCAGCTTTTGGCTGATGTCAGCAGCCATGATGGCTGCCACGTTCTTTTTTTGGGTTGAGCGAGATAGGGTTGTTGGTAAGTGGAAAACATCCCTCTCGGTCGCGGCAATGGTAACGGGTATTGCTTGTCTTCACTATTTCTATATGCGAGGAGTTTGGGTTGAAACAGGGCAAAGCCCAACCGTATTTAGATATGTAGATTGGCTCCTTACTGTACCGCTTCAAATCATCGAATTCTTCCTCATTCTTGTCGTCATTGCCGTTGTTCCTACCTCTTTATTCTGGCGTTTACTCATTGCAAGTATTGTTATGCTTGTCGGTGGTTATCTTGGTGAGGTGGGTACCTTAAGTCCAATGGTTGGCTTTGTTATAGGTATGATTGGTTGGCTCTATATCATCTATGAAATTTTCGTCGGCGAAGCGAGTACTATCAATGCAAATAGTGGTAATGAAGCTAGTCAAAGCGCTTTCAAAGCATTACGGCTTATCGTAACAATTGGTTGGTCGATTTATCCTATTGGTTATCTCGTTGGTTACTTTGGAGATGGCGGAAACGTTGCAATGCTCAATCTCATCTACAACCTTGCTGACTTTGTTAACAAGATTGCATTTGGTGTTGTTATTTGGGCGGCAGCAACAAGAGATGCAGACAACGCAAGAGCT MLNPSDFVGVSFWLMSAAMMAATFFFWVERDRVVGKWKTSLSVAAMVTGIACLHYFYMRGVWVETGQSPTVFRYVDWLLTVPLQIIEFFLILVVIAVVPTSLFWRLLIASIVMLVGGYLGEVGTLSPMVGFVIGMIGWLYIIYEIFVGEASTINANSGNEASQSAFKALRLIVTIGWSIYPIGYLVGYFGDGGNVAMLNLIYNLADFVNKIAFGVVIWAAATRDADNARA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTAAATCCTAGTGACTTTGTAGGAGTCAGCTTTTGGCTGATGTCAGCAGCCATGATGGCTGCCACGTTCTTTTTTTGGGTTGAGCGAGATAGGGTTGTTGGT---AAGTGGAAAACATCCCTCTCGGTCGCGGCAATGGTAACGGGTATTGCTTGTCTTCACTATTTCTATATGCGAGGAGTTTGGGTT------------------------------GAAACA---------------------GGGCAAAGCCCAACCGTATTTAGATATGTAGATTGG------------------------CTCCTTACTGTACCGCTTCAAATCATCGAATTCTTCCTCATTCTTGTCGTC---------ATT---GCCGTTGTTCCTACC---TCTTTA------------------------------------TTCTGGCGT---TTACTCATTGCAAGTATTGTTATGCTTGTCGGTGGTTATCTTGGTGAG---------GTG------------------GGT------ACC---------------------------------TTA------------------------------------------------------------------AGTCCA------------------ATGGTTGGC---TTTGTTATAGGTATGATTGGTTGGCTCTATATCATCTATGAAATT---------------TTC------GTC---GGCGAAGCGAGTACTATCAATGCAAAT------AGT---GGTAATGAAGCTAGT---CAA---AGC---GCT---TTC---AAA---GCATTA---CGGCTTATCGTAACAATT---------------------------------------------------------------GGTTGG---------TCGATTTATCCTATTGGTTATCTCGTTGGTTACTTTGGA---GATGGC---------------------------GGAAACGTT---------GCAATGCTCAATCTCATCTACAACCTTGCTGACTTTGTTAACAAGATTGCATTTGGTGTTGTTATTTGGGCGGCAGCAACAAGAGAT---GCAGACAACGCAAGAGCT--------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------MLNPSDFVGVSFWLMSAAMMAATFFFWVERDRVVG-KWKTSLSVAAMVTGIACLHYFYMRGVWV----------ET-------GQSPTVFRYVDW--------LLTVPLQIIEFFLILVV---I-AVVPT-SL------------FWR-LLIASIVMLVGGYLGE---V------G--T-----------L----------------------SP------MVG-FVIGMIGWLYIIYEI-----F--V-GEASTINAN--S-GNEAS-Q-S-A-F-K-AL-RLIVTI---------------------GW---SIYPIGYLVGYFG-DG---------GNV---AMLNLIYNLADFVNKIAFGVVIWAAATRD-ADNARA----------------------------------- [unk-Proteo2-Photobacterium]_NZ_AAOU01000021 [unk-Proteo2-Photobacterium] Photobacterium_sp_SKA34_1099521381144_genome_NZ_AAOU01000021 gi|89074598|gb|NZ_AAOU01000021| Photobacterium sp SKA34 1099521381144, whole genome shotgun sequence Photobacterium sp SKA34 1099521381144, whole genome shotgun sequence NZ_AAOU01000021 [[proteorhodopsin/Proteobacterial-like cluster 2/Photobacterium Gammaproteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Photobacterium Gammaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/Proteobacteria/Gammaproteobacteria/Vibrionales/Vibrionaceae/Photobacterium] #na genomic_DNA strain 14-nov-12 #na #na North Sea marine 58.94083 11.07944 Direct Submission Hagstrom,A.J., Ferriera,S., Johnson,J., Kravitz,S., Halpern,A., Remington,K., Beeson,K., Tran,B., Rogers,Y.H., Friedman,R. and Venter,J.C. Submitted (28FEB2006) J Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA #na #na ATGCTTAATCCTAGTGACTTTGTAGGAGTCAGCTTTTGGTTGATGTCAGCGGCCATGATGGCTGCCACATTCTTTTTTTGGGTAGAGCGAGATAGGGTTGTAGGTAAATGGAAAACATCCCTCTCTGTCGCGGCAATGGTAACGGGTATTGCTTGCCTTCACTATTTCTACATGCGAGGAATTTGGGTTGAAACAGGGCAAAGCCCAACAGTATTTAGATATGTAGATTGGCTCCTCACTGTTCCGCTCCAAATCATCGAATTCTTCCTAATTCTTGTCGTCATTGCTGTTGTTCCTACCTCTTTATTCTGGCGTTTACTCATTGCGAGTATTGTTATGCTTATAGGTGGTTACCTTGGCGAGGTGGGTACCTTAAGTCCAATGGTTGGTTTTGTTATAGGTATGATTGGTTGGCTCTACATCATCTATGAAATTTTCATTGGTGAAGCGAGCACTATTAATGCTAATAGTGGCAATGAGGCCAGTCAAAGTGCTTTCAAAGCATTACGGCTTATAGTAACTATTGGTTGGGCAATTTATCCTATTGGTTATCTCGTTGGTTACTTTGGGGATGGCGGAAACGTAGCAATGCTCAATCTCATTTATAACCTTGCTGACTTTGTTAACAAGATTGCATTTGGTGTTGTTATTTGGGCGGCAGCAACAAGAGATGCAGACAACACAAAAGCT MLNPSDFVGVSFWLMSAAMMAATFFFWVERDRVVGKWKTSLSVAAMVTGIACLHYFYMRGIWVETGQSPTVFRYVDWLLTVPLQIIEFFLILVVIAVVPTSLFWRLLIASIVMLIGGYLGEVGTLSPMVGFVIGMIGWLYIIYEIFIGEASTINANSGNEASQSAFKALRLIVTIGWAIYPIGYLVGYFGDGGNVAMLNLIYNLADFVNKIAFGVVIWAAATRDADNTKA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTAATCCTAGTGACTTTGTAGGAGTCAGCTTTTGGTTGATGTCAGCGGCCATGATGGCTGCCACATTCTTTTTTTGGGTAGAGCGAGATAGGGTTGTAGGT---AAATGGAAAACATCCCTCTCTGTCGCGGCAATGGTAACGGGTATTGCTTGCCTTCACTATTTCTACATGCGAGGAATTTGGGTT------------------------------GAAACA---------------------GGGCAAAGCCCAACAGTATTTAGATATGTAGATTGG------------------------CTCCTCACTGTTCCGCTCCAAATCATCGAATTCTTCCTAATTCTTGTCGTC---------ATT---GCTGTTGTTCCTACC---TCTTTA------------------------------------TTCTGGCGT---TTACTCATTGCGAGTATTGTTATGCTTATAGGTGGTTACCTTGGCGAG---------GTG------------------GGT------ACC---------------------------------TTA------------------------------------------------------------------AGTCCA------------------ATGGTTGGT---TTTGTTATAGGTATGATTGGTTGGCTCTACATCATCTATGAAATT---------------TTC------ATT---GGTGAAGCGAGCACTATTAATGCTAAT------AGT---GGCAATGAGGCCAGT---CAA---AGT---GCT---TTC---AAA---GCATTA---CGGCTTATAGTAACTATT---------------------------------------------------------------GGTTGG---------GCAATTTATCCTATTGGTTATCTCGTTGGTTACTTTGGG---GATGGC---------------------------GGAAACGTA---------GCAATGCTCAATCTCATTTATAACCTTGCTGACTTTGTTAACAAGATTGCATTTGGTGTTGTTATTTGGGCGGCAGCAACAAGAGAT---GCAGACAACACAAAAGCT--------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------MLNPSDFVGVSFWLMSAAMMAATFFFWVERDRVVG-KWKTSLSVAAMVTGIACLHYFYMRGIWV----------ET-------GQSPTVFRYVDW--------LLTVPLQIIEFFLILVV---I-AVVPT-SL------------FWR-LLIASIVMLIGGYLGE---V------G--T-----------L----------------------SP------MVG-FVIGMIGWLYIIYEI-----F--I-GEASTINAN--S-GNEAS-Q-S-A-F-K-AL-RLIVTI---------------------GW---AIYPIGYLVGYFG-DG---------GNV---AMLNLIYNLADFVNKIAFGVVIWAAATRD-ADNTKA----------------------------------- [unk-Proteo2-Photobacterium]_AEIU01000029 [unk-Proteo2-Photobacterium] Vibrio_caribbenthicus_ATCC_BAA_2122_VIBC2010_142_WGS_AEIU01000029 gi|309370473|gb|AEIU01000029| Vibrio caribbenthicus ATCC BAA2122 VIBC2010 142, whole genome shotgun sequence Vibrio caribbenthicus ATCC BAA2122 VIBC2010 142, whole genome shotgun sequence AEIU01000029 [[proteorhodopsin/Proteobacterial-like cluster 2/Photobacterium Gammaproteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Photobacterium Gammaproteobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/Proteobacteria/Gammaproteobacteria/Vibrionales/Vibrionaceae/Vibrio] taxon:796620 genomic_DNA strain 20-oct-10 #na #na Caribbean Sea marine 12.143241 -69.157604 Vibrio caribbeanicus sp. nov., isolated from the marine sponge Scleritoderma cyanea Hoffmann,M., Monday,S.R., Allard,M.W., Strain,E.A., Whittaker,P., Naum,M., McCarthy,P.J., Lopez,J.V., Fischer,M. and Brown,E.W. Int. J. Syst. Evol. Microbiol. 62 (PT 8), 17361743 (2012) 21930677 #na ATGCTTAATCCAAGTGATTTTGTTGGAGTTAGTTTTTGGTTGATGTCGGCGGCCATGATGGCTGCAACCTTTTTTTTCTGGGTGGAGCGTGATCGTGTTGTCGGAAAATGGAAAACCTCACTATCAGTAGCCGCAATGGTCACCGGAATTGCTTGTCTACATTATTTTTATATGAGGGGAGTCTGGGTCGAAACAGGACAAAGCCCTACCGTTTTCCGCTATGTGGATTGGTTACTGACGGTACCACTACAGATCATAGAGTTCTTCTTAATTCTGGCCGCTATTGCCTCTGTGCCTACATCGCTATTTTGGCGACTGCTTGTTGCTAGTGTCGTTATGCTTGTCGGCGGTTATCTAGGCGAGGTTGGTACTCTGACTCCTATGGTTGGTTTCGTCATAGGAATGTTAGGCTGGATCTACATCATTTATGAAGTCTTTATGGGAGAGGCAAGTTCCATTAACGCAAATAGTGGTAATGAAGCAAGTCAAACAGCATTTAAAGCACTTAGACTGATTGTGACTGTAGGTTGGGCTATTTATCCTATTGGTTACTTGATGGGCTACTTTGGTGAAGGTGCAAACGTTGCAAACCTAAACCTTATCTACAACTTAGCCGATTTTGTTAACAAAATCGCTTTCGGTGTTGTAATTTGGGCCGCAGCAACAAGAGACTCAGAGTCAAAATTA MLNPSDFVGVSFWLMSAAMMAATFFFWVERDRVVGKWKTSLSVAAMVTGIACLHYFYMRGVWVETGQSPTVFRYVDWLLTVPLQIIEFFLILAAIASVPTSLFWRLLVASVVMLVGGYLGEVGTLTPMVGFVIGMLGWIYIIYEVFMGEASSINANSGNEASQTAFKALRLIVTVGWAIYPIGYLMGYFGEGANVANLNLIYNLADFVNKIAFGVVIWAAATRDSESKL ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTAATCCAAGTGATTTTGTTGGAGTTAGTTTTTGGTTGATGTCGGCGGCCATGATGGCTGCAACCTTTTTTTTCTGGGTGGAGCGTGATCGTGTTGTCGGA---AAATGGAAAACCTCACTATCAGTAGCCGCAATGGTCACCGGAATTGCTTGTCTACATTATTTTTATATGAGGGGAGTCTGGGTC------------------------------GAAACA---------------------GGACAAAGCCCTACCGTTTTCCGCTATGTGGATTGG------------------------TTACTGACGGTACCACTACAGATCATAGAGTTCTTCTTAATTCTGGCCGCT---------ATT---GCCTCTGTGCCTACA---TCGCTA------------------------------------TTTTGGCGA---CTGCTTGTTGCTAGTGTCGTTATGCTTGTCGGCGGTTATCTAGGCGAG---------GTT------------------GGT------ACT---------------------------------CTG------------------------------------------------------------------ACTCCT------------------ATGGTTGGT---TTCGTCATAGGAATGTTAGGCTGGATCTACATCATTTATGAAGTC---------------TTT------ATG---GGAGAGGCAAGTTCCATTAACGCAAAT------AGT---GGTAATGAAGCAAGT---CAA---ACA---GCA---TTT---AAA---GCACTT---AGACTGATTGTGACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCTATTGGTTACTTGATGGGCTACTTTGGT---GAAGGT---------------------------GCAAACGTT---------GCAAACCTAAACCTTATCTACAACTTAGCCGATTTTGTTAACAAAATCGCTTTCGGTGTTGTAATTTGGGCCGCAGCAACAAGAGAC---TCAGAGTCAAAATTA------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------MLNPSDFVGVSFWLMSAAMMAATFFFWVERDRVVG-KWKTSLSVAAMVTGIACLHYFYMRGVWV----------ET-------GQSPTVFRYVDW--------LLTVPLQIIEFFLILAA---I-ASVPT-SL------------FWR-LLVASVVMLVGGYLGE---V------G--T-----------L----------------------TP------MVG-FVIGMLGWIYIIYEV-----F--M-GEASSINAN--S-GNEAS-Q-T-A-F-K-AL-RLIVTV---------------------GW---AIYPIGYLMGYFG-EG---------ANV---ANLNLIYNLADFVNKIAFGVVIWAAATRD-SESKL------------------------------------ [unk-euryarch-HF70_59C08]_DQ203827 [unk-euryarch-HF70_59C08] SS114a40E4_env_samples_DQ203827 gi|77548102|gb|DQ203827| Uncultured bacterium clone SS114a40E4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40E4 predicted proteorhodopsin gene, partial cds DQ203827 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATAGATTGGCTGATAACCGTGCCACTTCAGGTAGTCGAATTCTACCTGATTATGGCAGCTATCGGAGCAGCCACCTTCGCCATGTTCAGGAACCTGATGACAGCATCAATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAGTCTGGAGCTTGGGATCTCTTCGGAGACTCGAGTACTGAAATCTGGTGGGCCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTCTGGGCTGGAGATGTCAAGGAGGCATCAGAGACCGGTAGCGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTGTCCGTCGGGTGGGCCATCTATCCA SYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMTASIVMLVAGFFGESGAWDLFGDSSTEIWWAIGMAGWGYILYALWAGDVKEASETGSDGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATAGATTGG------------------------CTGATAACCGTGCCACTTCAGGTAGTCGAATTCTACCTGATTATGGCAGCT---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGGAAC---CTGATGACAGCATCAATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAG---------TCT------------------GGA------GCT---------------------------------TGG------GATCTC------TTCGGA---------GAC---------------------------TCGAGTACT------------------GAAATCTGG---TGGGCCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTC---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGAG------ACC---GGTAGCGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTGTCCGTC---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMTASIVMLVAGFFGE---S------G--A-----------W--DL--FG---D---------SST------EIW-WAIGMAGWGYILYAL-----W--A-GDVKE-ASE--T-GSDGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ339287 [unk-euryarch-HF70_59C08] clone_S-S80M-D7_DQ339287 gi|85681549|gb|DQ339287| Uncultured bacterium clone S-S80M-D7 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-D7 predicted proteorhodopsin gene, partial cds. DQ339287 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATAACCGTGCCACTTCAGGTAGTCGAATTCTACCTGATTATGGCAGCTATCGGAGCAGCCACCTTCGCCATGTTCAGGAACCTGATGACAGCATCAATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAGTCTGGAGCTTGGGATCTCTTCGGAGACTCGAGTACTGAAATCTGGTGGGCCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTCTGGGCTGGAGATGTCAAGGAGGCATCAGAGTCCGGTAGCGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTGTCCGTCGGGTGGGCCATCTATCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMTASIVMLVAGFFGESGAWDLFGDSSTEIWWAIGMAGWGYILYALWAGDVKEASESGSDGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATAACCGTGCCACTTCAGGTAGTCGAATTCTACCTGATTATGGCAGCT---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGGAAC---CTGATGACAGCATCAATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAG---------TCT------------------GGA------GCT---------------------------------TGG------GATCTC------TTCGGA---------GAC---------------------------TCGAGTACT------------------GAAATCTGG---TGGGCCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTC---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGAG------TCC---GGTAGCGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTGTCCGTC---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMTASIVMLVAGFFGE---S------G--A-----------W--DL--FG---D---------SST------EIW-WAIGMAGWGYILYAL-----W--A-GDVKE-ASE--S-GSDGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203807 [unk-euryarch-HF70_59C08] SS114a40B4_env_samples_DQ203807 gi|77548062|gb|DQ203807| Uncultured bacterium clone SS114a40B4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40B4 predicted proteorhodopsin gene, partial cds DQ203807 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATAGACTGGCTGATAACCGTGCCACTTCAGGTAGTCGAATTCTACCTGATTATGGCAGCTATCGGAGCAGCCACCTTCGCCATGTTCAGGAACCTGATGACAGCATCAATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAGTCTGGAGCTTGGGATCTCTTCGGAGACTCGAGTACTGAAATCTGGTGGGCCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTCTGGGCTGGAGATGTCAAGGAGGCATCAGAGTCCGGTAGCGATGGCGTGCAGTTCGCCCTCACCTCGATGAGGTGGATCGTGTCCGTCGGGTGGGCAATATATCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMTASIVMLVAGFFGESGAWDLFGDSSTEIWWAIGMAGWGYILYALWAGDVKEASESGSDGVQFALTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATAACCGTGCCACTTCAGGTAGTCGAATTCTACCTGATTATGGCAGCT---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGGAAC---CTGATGACAGCATCAATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAG---------TCT------------------GGA------GCT---------------------------------TGG------GATCTC------TTCGGA---------GAC---------------------------TCGAGTACT------------------GAAATCTGG---TGGGCCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTC---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGAG------TCC---GGTAGCGATGGCGTG---CAG---TTC---GCC---CTC---ACC---TCGATG---AGGTGGATCGTGTCCGTC---------------------------------------------------------------GGGTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMTASIVMLVAGFFGE---S------G--A-----------W--DL--FG---D---------SST------EIW-WAIGMAGWGYILYAL-----W--A-GDVKE-ASE--S-GSDGV-Q-F-A-L-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203821 [unk-euryarch-HF70_59C08] SS114a40D6_env_samples_DQ203821 gi|77548090|gb|DQ203821| Uncultured bacterium clone SS114a40D6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40D6 predicted proteorhodopsin gene, partial cds DQ203821 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTGATAACCGTGCCACTTCAGGTAGTCGAATTCTACCTGATTATGGCAGCTATCGGAGCAGCCACCTTCGCCATGTTCAGGAACCTGATGACAGCATCAATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAGTCTGGAGCTTGGGATCTCTTCGGAGACTCGAGTACTGAAATCTGGTGGGCCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTCTGGGCTGGAGATGTCAAGGAGGCATCAGAGTCCGGTAGCGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTGTCCGTCGGGTGGGCCATATACCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMTASIVMLVAGFFGESGAWDLFGDSSTEIWWAIGMAGWGYILYALWAGDVKEASESGSDGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTGATAACCGTGCCACTTCAGGTAGTCGAATTCTACCTGATTATGGCAGCT---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGGAAC---CTGATGACAGCATCAATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAG---------TCT------------------GGA------GCT---------------------------------TGG------GATCTC------TTCGGA---------GAC---------------------------TCGAGTACT------------------GAAATCTGG---TGGGCCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTC---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGAG------TCC---GGTAGCGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTGTCCGTC---------------------------------------------------------------GGGTGG---------GCCATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMTASIVMLVAGFFGE---S------G--A-----------W--DL--FG---D---------SST------EIW-WAIGMAGWGYILYAL-----W--A-GDVKE-ASE--S-GSDGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203823 [unk-euryarch-HF70_59C08] SS114a40D8_env_samples_DQ203823 gi|77548094|gb|DQ203823| Uncultured bacterium clone SS114a40D8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40D8 predicted proteorhodopsin gene, partial cds DQ203823 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTGATAACCGTGCCACTTCAGGTAGTCGAATTCTACCTGATTATGGCAGCTATCGGAGCAGCCACCTTCGCCATGTTCAGGAACCTGATGACAGCATCAATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAGTCTGGAGCTTGGGATCTCTTCGGAGACTCGAGTACTGAAATCTGGTGGGCCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTCTGGGCTGGAGATGTCAAGGAGGCATCAGAGTCCGGTAGCGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTGTCCGTCGGGTGGGCCATATACCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMTASIVMLVAGFFGESGAWDLFGDSSTEIWWAIGMAGWGYILYALWAGDVKEASESGSDGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTGATAACCGTGCCACTTCAGGTAGTCGAATTCTACCTGATTATGGCAGCT---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGGAAC---CTGATGACAGCATCAATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAG---------TCT------------------GGA------GCT---------------------------------TGG------GATCTC------TTCGGA---------GAC---------------------------TCGAGTACT------------------GAAATCTGG---TGGGCCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTC---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGAG------TCC---GGTAGCGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTGTCCGTC---------------------------------------------------------------GGGTGG---------GCCATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMTASIVMLVAGFFGE---S------G--A-----------W--DL--FG---D---------SST------EIW-WAIGMAGWGYILYAL-----W--A-GDVKE-ASE--S-GSDGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203805 [unk-euryarch-HF70_59C08] SS114a40B2_env_samples_DQ203805 gi|77548058|gb|DQ203805| Uncultured bacterium clone SS114a40B2 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40B2 predicted proteorhodopsin gene, partial cds DQ203805 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGACTGGCTGATAACCGTGCCACTTCAGGTAGTCGAATTCTACCTGATTATGGCAGCTATCGGAGCAGCCACCTTCGCCATGTTCAGGAACCTGATGACAGCATCAATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAGTCTGGAGCTTGGGATCTCTTCGGAGACTCGAGTACTGAAATCTGGTGGGCCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTCTGGGCTGGAGATGTCAAGGAGGCATCAGAGTCCGGTAGCGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTGTCCGTCGGGTGGGCCATTTATCCA SYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMTASIVMLVAGFFGESGAWDLFGDSSTEIWWAIGMAGWGYILYALWAGDVKEASESGSDGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGACTGG------------------------CTGATAACCGTGCCACTTCAGGTAGTCGAATTCTACCTGATTATGGCAGCT---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGGAAC---CTGATGACAGCATCAATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAG---------TCT------------------GGA------GCT---------------------------------TGG------GATCTC------TTCGGA---------GAC---------------------------TCGAGTACT------------------GAAATCTGG---TGGGCCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTC---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGAG------TCC---GGTAGCGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTGTCCGTC---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMTASIVMLVAGFFGE---S------G--A-----------W--DL--FG---D---------SST------EIW-WAIGMAGWGYILYAL-----W--A-GDVKE-ASE--S-GSDGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203771 [unk-euryarch-HF70_59C08] SS114a0E6_env_samples_DQ203771 gi|77547990|gb|DQ203771| Uncultured bacterium clone SS114a0E6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0E6 predicted proteorhodopsin gene, partial cds DQ203771 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGACTGGCTGATAACCGTGCCACTTCAGGTAGTCGAATTCTACCTGATTATGGCAGCTATCGGAGCAGCTACCTTCGCCATGTTCAGGAACCTGATGACAGCATCAATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAGTCTGGAGCTTGGGATCTCTTCGGAGACTCGAGCACTGAAATCTGGTGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTCTGGGCTGGAGATGTCAAGGAGGCATCAGAGTCCGGGAGCGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTGTCCGTCGGGTGGGCAATCTATCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMTASIVMLVAGFFGESGAWDLFGDSSTEIWWVIGMAGWGYILYALWAGDVKEASESGSDGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGACTGG------------------------CTGATAACCGTGCCACTTCAGGTAGTCGAATTCTACCTGATTATGGCAGCT---------ATC---GGAGCAGCTACCTTC---GCCATG------------------------------------TTCAGGAAC---CTGATGACAGCATCAATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAG---------TCT------------------GGA------GCT---------------------------------TGG------GATCTC------TTCGGA---------GAC---------------------------TCGAGCACT------------------GAAATCTGG---TGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTC---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGAG------TCC---GGGAGCGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTGTCCGTC---------------------------------------------------------------GGGTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMTASIVMLVAGFFGE---S------G--A-----------W--DL--FG---D---------SST------EIW-WVIGMAGWGYILYAL-----W--A-GDVKE-ASE--S-GSDGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203313 [unk-euryarch-HF70_59C08] SS114a80C5_env_samples_DQ203313 gi|77547074|gb|DQ203313| Uncultured bacterium clone SS114a80C5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a80C5 predicted proteorhodopsin gene, partial cds DQ203313 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_80m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_2003 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTGATAACCGTGCCACTTCAGGTAGTCGAATTCTACCTGATTATGGCAGCTATCGGAGCAGCCACCTTCGCCATGTTCAGGAACCTGATGACAGCATCAATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAGTCTGGTGCTTGGGATCTCTTCGGAGACTCGAGTACTGAAATCTGGTGGGTCATCGGTATGGCAGGATGGGGTTACATCCTCTATGCACTCTGGGCTGGAGATGTCAAGGAGGCATCAGAGTCCGGGAGCGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTGTCTGTCGGGTGGGCAATCTATCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMTASIVMLVAGFFGESGAWDLFGDSSTEIWWVIGMAGWGYILYALWAGDVKEASESGSDGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTGATAACCGTGCCACTTCAGGTAGTCGAATTCTACCTGATTATGGCAGCT---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGGAAC---CTGATGACAGCATCAATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAG---------TCT------------------GGT------GCT---------------------------------TGG------GATCTC------TTCGGA---------GAC---------------------------TCGAGTACT------------------GAAATCTGG---TGGGTCATCGGTATGGCAGGATGGGGTTACATCCTCTATGCACTC---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGAG------TCC---GGGAGCGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTGTCTGTC---------------------------------------------------------------GGGTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMTASIVMLVAGFFGE---S------G--A-----------W--DL--FG---D---------SST------EIW-WVIGMAGWGYILYAL-----W--A-GDVKE-ASE--S-GSDGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ339254 [unk-euryarch-HF70_59C08] clone_S-S80M-A4_DQ339254 gi|85681483|gb|DQ339254| Uncultured bacterium clone S-S80M-A4 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-A4 predicted proteorhodopsin gene, partial cds. DQ339254 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATAACCGTGCCACTTCAGGTAGTCGAATTCTACCTGATTATGGCAGCTATCGGAGCAGCCACCTTCGCCATGTTCAGGAACCTGATGACAGCATCAATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAGTCTGGAGCTTGGGATCTCTTCGGAGACTCGAGCACTGAAATCTGGTGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTCTGGGCTGGAGATGTCAAGGAGGCATCAGAGTCCGGGAGCGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTGTCCGTCGGGTGGGCAATTTATCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMTASIVMLVAGFFGESGAWDLFGDSSTEIWWVIGMAGWGYILYALWAGDVKEASESGSDGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATAACCGTGCCACTTCAGGTAGTCGAATTCTACCTGATTATGGCAGCT---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGGAAC---CTGATGACAGCATCAATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAG---------TCT------------------GGA------GCT---------------------------------TGG------GATCTC------TTCGGA---------GAC---------------------------TCGAGCACT------------------GAAATCTGG---TGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTC---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGAG------TCC---GGGAGCGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTGTCCGTC---------------------------------------------------------------GGGTGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMTASIVMLVAGFFGE---S------G--A-----------W--DL--FG---D---------SST------EIW-WVIGMAGWGYILYAL-----W--A-GDVKE-ASE--S-GSDGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203314 [unk-euryarch-HF70_59C08] SS114a80C6_env_samples_DQ203314 gi|77547076|gb|DQ203314| Uncultured bacterium clone SS114a80C6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a80C6 predicted proteorhodopsin gene, partial cds DQ203314 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_80m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_2003 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGACTGGCTGATAACCGTGCCACTTCAGGTAGTCGAATTCTACCTGATTATGGCAGCTATCGGAGCAGCCACCTTCGCCATGTTCAGGAACCTGATGACAGCATCAATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAGTCTGGAGCTTGGGATCTCTTCGAAGACTCGAGCACTGAAATCTGGTGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTCTGGGCTGGAGATGTCAAGGAGGCATCAGAGTCCGGGAGCGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTGTCCGTCGGGTGGGCCATTTATCCA SYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMTASIVMLVAGFFGESGAWDLFEDSSTEIWWVIGMAGWGYILYALWAGDVKEASESGSDGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGACTGG------------------------CTGATAACCGTGCCACTTCAGGTAGTCGAATTCTACCTGATTATGGCAGCT---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGGAAC---CTGATGACAGCATCAATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAG---------TCT------------------GGA------GCT---------------------------------TGG------GATCTC------TTCGAA---------GAC---------------------------TCGAGCACT------------------GAAATCTGG---TGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTC---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGAG------TCC---GGGAGCGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTGTCCGTC---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMTASIVMLVAGFFGE---S------G--A-----------W--DL--FE---D---------SST------EIW-WVIGMAGWGYILYAL-----W--A-GDVKE-ASE--S-GSDGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203750 [unk-euryarch-HF70_59C08] SS114a0B7_env_samples_DQ203750 gi|77547948|gb|DQ203750| Uncultured bacterium clone SS114a0B7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0B7 predicted proteorhodopsin gene, partial cds DQ203750 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGACTGGCTGATAACCGTGCCACTTCAGGTAGTCGAATTCTACCTGATTATGGCAGCTATCGGAGCAGCCACCTTCGCCATGTTCAGGAACCTGATGACAGCATCAATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAGTCTGGAGCTTGGGATCTCTTCGGAGACTCGAGCACTGAAATCTGGTGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTCTGGGCTGGAGATGTCAAGGAGGCATCAGAGTCCGGGAGCGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTGTCCGTCGGGTGGGCAATATATCCA SYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMTASIVMLVAGFFGESGAWDLFGDSSTEIWWVIGMAGWGYILYALWAGDVKEASESGSDGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGACTGG------------------------CTGATAACCGTGCCACTTCAGGTAGTCGAATTCTACCTGATTATGGCAGCT---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGGAAC---CTGATGACAGCATCAATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAG---------TCT------------------GGA------GCT---------------------------------TGG------GATCTC------TTCGGA---------GAC---------------------------TCGAGCACT------------------GAAATCTGG---TGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTC---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGAG------TCC---GGGAGCGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTGTCCGTC---------------------------------------------------------------GGGTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMTASIVMLVAGFFGE---S------G--A-----------W--DL--FG---D---------SST------EIW-WVIGMAGWGYILYAL-----W--A-GDVKE-ASE--S-GSDGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203300 [unk-euryarch-HF70_59C08] SS114a80A12_env_samples_DQ203300 gi|77547048|gb|DQ203300| Uncultured bacterium clone SS114a80A12 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a80A12 predicted proteorhodopsin gene, partial cds DQ203300 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_80m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_2003 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTGATAACCGTGCCACTTCAGGTAGTCGAATTCTACCTGATTATGGCAGCTATCGGAGCAGCCACCTTCGCCATGTTCAGGAACCTGATGACAGCATCAATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAGTCTGGAGCTTGGGATCTCTTCGGAGACTCGAGCACTGAAATCTGGTGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTCTGGGCTGGAGATGTCAAGGAGGCATCAGAGTCCGGGAGCGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTGTCCGTCGGGTGGGCAATATATCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMTASIVMLVAGFFGESGAWDLFGDSSTEIWWVIGMAGWGYILYALWAGDVKEASESGSDGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTGATAACCGTGCCACTTCAGGTAGTCGAATTCTACCTGATTATGGCAGCT---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGGAAC---CTGATGACAGCATCAATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAG---------TCT------------------GGA------GCT---------------------------------TGG------GATCTC------TTCGGA---------GAC---------------------------TCGAGCACT------------------GAAATCTGG---TGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTC---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGAG------TCC---GGGAGCGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTGTCCGTC---------------------------------------------------------------GGGTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMTASIVMLVAGFFGE---S------G--A-----------W--DL--FG---D---------SST------EIW-WVIGMAGWGYILYAL-----W--A-GDVKE-ASE--S-GSDGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203297 [unk-euryarch-HF70_59C08] SS114a801_env_samples_DQ203297 gi|77547042|gb|DQ203297| Uncultured bacterium clone SS114a801 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a801 predicted proteorhodopsin gene, partial cds DQ203297 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_80m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_2003 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATAGACTGGCTAATAACCGTGCCACTTCAGGTAGTCGAATTCTACCTGATTATGGCAGCTATAGGGGCAGCCACCTTCGCCATGTTCAGGAACCTGATGACAGCATCAATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAGTCTGGAGCTTGGGATCTCTTCGGAGACTCGAGCACTGAAATCTGGTGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTCTGGGCTGGAGATGTCAAGGAGGCATCAGAGTCCGGGAGCGATGGCGTGAAGTTCGCCTTCACCTCGATGAGGTGGATCGTGTCCGTCGGGTGGGCCATATACCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMTASIVMLVAGFFGESGAWDLFGDSSTEIWWVIGMAGWGYILYALWAGDVKEASESGSDGVKFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATAACCGTGCCACTTCAGGTAGTCGAATTCTACCTGATTATGGCAGCT---------ATA---GGGGCAGCCACCTTC---GCCATG------------------------------------TTCAGGAAC---CTGATGACAGCATCAATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAG---------TCT------------------GGA------GCT---------------------------------TGG------GATCTC------TTCGGA---------GAC---------------------------TCGAGCACT------------------GAAATCTGG---TGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTC---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGAG------TCC---GGGAGCGATGGCGTG---AAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTGTCCGTC---------------------------------------------------------------GGGTGG---------GCCATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMTASIVMLVAGFFGE---S------G--A-----------W--DL--FG---D---------SST------EIW-WVIGMAGWGYILYAL-----W--A-GDVKE-ASE--S-GSDGV-K-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_1112688850797 [unk-euryarch-HF70_59C08] JCVI_ORF_1112688850797_GS114_Open_Ocean_2m jcvi|1112688850797| 1112688850797 JCVI ORF 1112688850797 1112688850797 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 15-AUG-2005 Open_Ocean/2m_depth/S_33.1_psu/GS114/500_Miles_west_of_the_Seychelles_in_the_Indian_Ocean/Indian_Ocean Indian Ocean marine -4.990278 64.97667 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf GGAAAAGCAAGAGGGCTTGCTATCGGCACATCGATAGCACTCGGAGTCGTTATGCTGCCAACTGTGGCTGCGGAGACTCAGATCCTCGCTGAAGACGATTGGGTGGGAATCAGCTTCTGGATAGCAACAGCAATGATGCTAGCCTCAACTGTGTTCTTCCTGGTCGAGAGACAGAACGTGGATGACAAGTGGAAGACTTCCATGACGGTGGCCGCTCTGGTCACTGGTGTGGCATGGTACCACTACACATACATGCGTGAGGTCGCAGTGATGGAAGGAGGCGGATCACCGCTGGTCTACAGGTACATTGACTGGCTGATCACAGTTCCACTTCAGGTAGTCGAGTTCTACCTGATTATGGCGGCTATCGGAGCAGCCACCTTCGCCATGTTCAGAAACCTGATGGCAGCATCAATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAGTCTGGGGCTTGGGATCTCTTCGGAGACATGAGCACTGAGATCTGGTGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTACGCACTCTGGGCTGGAGATGTCAAGGAGGCATCAGAGTCCGGGAGCGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTATCCGTCGGGTGGGCAATCTACCCAATCGGATACATGATGGGCAATGACATGCTTGACGGCTTCAATGCAGATGACATGAACATCATCTACAACATAGCTGACTTGGTGAACAAGACCGCATTCGGTATGATGGTCTGGTACGCAGCCAAGATGGACTCC GKARGLAIGTSIALGVVMLPTVAAETQILAEDDWVGISFWIATAMMLASTVFFLVERQNVDDKWKTSMTVAALVTGVAWYHYTYMREVAVMEGGGSPLVYRYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMAASIVMLVAGFFGESGAWDLFGDMSTEIWWVIGMAGWGYILYALWAGDVKEASESGSDGVQFAFTSMRWIVSVGWAIYPIGYMMGNDMLDGFNADDMNIIYNIADLVNKTAFGMMVWYAAKMDS ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAAAAGCAAGAGGGCTTGCTATCGGCACATCGATAGCACTCGGAGTCGTTATGCTGCCAACTGTGGCTGCGGAGACTCAGATCCTCGCTGAAGACGATTGGGTGGGAATCAGCTTCTGGATAGCAACAGCAATGATGCTAGCCTCAACTGTGTTCTTCCTGGTCGAGAGACAGAACGTGGATGACAAGTGGAAGACTTCCATGACGGTGGCCGCTCTGGTCACTGGTGTGGCATGGTACCACTACACATACATGCGTGAGGTCGCAGTGATGGAAGGAGGCGGATCACCGCTGGTCTACAGGTACATTGACTGG------------------------CTGATCACAGTTCCACTTCAGGTAGTCGAGTTCTACCTGATTATGGCGGCT---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGAAAC---CTGATGGCAGCATCAATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAG---------TCT------------------GGG------GCT---------------------------------TGG------GATCTC------TTCGGA---------GAC---------------------------ATGAGCACT------------------GAGATCTGG---TGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTACGCACTC---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGAG------TCC---GGGAGCGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTATCCGTC---------------------------------------------------------------GGGTGG---------GCAATCTACCCAATCGGATACATGATGGGCAATGACATG---CTTGAC---------GGC---TTCAATGCAGATGACATGAACATCATCTACAACATAGCTGACTTGGTGAACAAGACCGCATTCGGTATGATGGTCTGGTACGCAGCCAAGATGGACTCC------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------GKARGLAIGTSIALGVVMLPTVAAETQILAEDDWVGISFWIATAMMLASTVFFLVERQNVDDKWKTSMTVAALVTGVAWYHYTYMREVAVMEGGGSPLVYRYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------W--DL--FG---D---------MST------EIW-WVIGMAGWGYILYAL-----W--A-GDVKE-ASE--S-GSDGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYPIGYMMGNDM-LD---G-FNADDMNIIYNIADLVNKTAFGMMVWYAAKMDS------------------------------------------------ [unk-euryarch-HF70_59C08]_EU915807 [unk-euryarch-HF70_59C08] PF92011_env_samples_EU915807 gi|229358496|gb|EU915807| Uncultured microorganism clone PF92011 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF92011 putative proteorhodopsin gene, partial cds EU915807 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGTGTTCTTCTTGGTCGAGAGACAGAACGTGGATGACAAGTGGAAGACTTCCATGACGGTGGCCGCTCTGGTCACTGGTGTGGCATGGTACCACTACACCTACATGCGTGAGGTCGCAGTGATGGAAGGAGGCGGATCACCGCTAGTCTACAGGTACATTGACTGGCTGATCACAGTGCCACTACAGGTAGTCGAGTTCTATCTGATAATGGCAGCTATCGGAGCAGCCACCTTCGCCATGTTCAGAAACCTGATGGCAGCATCAATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAGTCTGGAGCTTGGGATCTCTTCGGAGGCTCGAGCACTGAGATCTGGTGGGTCATCGGTATGGCAGGATGGGTTTACATCCTCTATGCACTCTGGGCTGGAGATGTCAAGGAGGCATCAGAGTCCGGGAGCGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTATCTGTAGGGTGGGCCATTTAC MVAATVFFLVERQNVDDKWKTSMTVAALVTGVAWYHYTYMREVAVMEGGGSPLVYRYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMAASIVMLVAGFFGESGAWDLFGGSSTEIWWVIGMAGWVYILYALWAGDVKEASESGSDGVQFAFTSMRWIVSVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTGTTCTTCTTGGTCGAGAGACAGAACGTGGATGACAAGTGGAAGACTTCCATGACGGTGGCCGCTCTGGTCACTGGTGTGGCATGGTACCACTACACCTACATGCGTGAGGTCGCAGTGATGGAAGGAGGCGGATCACCGCTAGTCTACAGGTACATTGACTGG------------------------CTGATCACAGTGCCACTACAGGTAGTCGAGTTCTATCTGATAATGGCAGCT---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGAAAC---CTGATGGCAGCATCAATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAG---------TCT------------------GGA------GCT---------------------------------TGG------GATCTC------TTCGGA---------GGC---------------------------TCGAGCACT------------------GAGATCTGG---TGGGTCATCGGTATGGCAGGATGGGTTTACATCCTCTATGCACTC---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGAG------TCC---GGGAGCGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTATCTGTA---------------------------------------------------------------GGGTGG---------GCCATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------MVAATVFFLVERQNVDDKWKTSMTVAALVTGVAWYHYTYMREVAVMEGGGSPLVYRYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------W--DL--FG---G---------SST------EIW-WVIGMAGWVYILYAL-----W--A-GDVKE-ASE--S-GSDGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ926995 [unk-euryarch-HF70_59C08] clone_PF91115_DQ926995 gi|116294105|gb|DQ926995| Uncultured bacterium clone PF91115 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF91115 putative proteorhodopsin gene, partial cds. DQ926995 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGGTTGCCGCTACTGTCTTCTTCTTGGTCGAGAGACAGAACGTGGATGACAAGTGGAAGACTTCCATGACGGTGGCCGCTCTGGTCACTGGTGTGGCATGGTACCACTACACCTACATGCGTGAGGTCGCAGTGATGGAAGGAGGCGGATCACCGCTAGTCTACAGGTACATTGACTGGCTGATCACAGTGCCACTACAGGTAGTCGAGTTCTATCTGATAATGGCAGCTATCGGAGCAGCCACCTTCGCCATGTTCAGAAACCTGATGGCAGCATCAATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAGTCTGGAGCTTGGGATCTCTTCGGAGGCTCGAGCACTGAGATCTGGTGGGTCATCGGTATGGCAGGATGGGTTTACATCCTCTATGCACTCTGGGCTGGAGATGTCAAGGAGGCATCAGAGTCCGGGAGCGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTATCTGTAGGGTGGGCCATATACCCA MVAATVFFLVERQNVDDKWKTSMTVAALVTGVAWYHYTYMREVAVMEGGGSPLVYRYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMAASIVMLVAGFFGESGAWDLFGGSSTEIWWVIGMAGWVYILYALWAGDVKEASESGSDGVQFAFTSMRWIVSVGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTCTTCTTCTTGGTCGAGAGACAGAACGTGGATGACAAGTGGAAGACTTCCATGACGGTGGCCGCTCTGGTCACTGGTGTGGCATGGTACCACTACACCTACATGCGTGAGGTCGCAGTGATGGAAGGAGGCGGATCACCGCTAGTCTACAGGTACATTGACTGG------------------------CTGATCACAGTGCCACTACAGGTAGTCGAGTTCTATCTGATAATGGCAGCT---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGAAAC---CTGATGGCAGCATCAATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAG---------TCT------------------GGA------GCT---------------------------------TGG------GATCTC------TTCGGA---------GGC---------------------------TCGAGCACT------------------GAGATCTGG---TGGGTCATCGGTATGGCAGGATGGGTTTACATCCTCTATGCACTC---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGAG------TCC---GGGAGCGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTATCTGTA---------------------------------------------------------------GGGTGG---------GCCATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------MVAATVFFLVERQNVDDKWKTSMTVAALVTGVAWYHYTYMREVAVMEGGGSPLVYRYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------W--DL--FG---G---------SST------EIW-WVIGMAGWVYILYAL-----W--A-GDVKE-ASE--S-GSDGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ926985 [unk-euryarch-HF70_59C08] clone_PF91023_DQ926985 gi|116294085|gb|DQ926985| Uncultured bacterium clone PF91023 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF91023 putative proteorhodopsin gene, partial cds. DQ926985 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGCTTGCCGCTACTGTATTCTTCTTGGTCGAGAGACAGAACGTGGATGACAAGTGGAAGACTTCCATGACGGTGGCCGCTCTGGTCACTGGTGTGGCATGGTACCACTACACCTACATGCGTGAGGTCGCAGTGATGGAAGGAGGCGGATCACCGCCAGTCTACAGGTACATTGACTGGCTGATCACAGTGCCACTACAGGTAGTCGAGTTCTATCTGATAATGGCAGCTATCGGAGCAGCCACCTTCGCCATGTTCAGAAACCTGATGGCAGCATCAATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAGTCTGGAGCTTGGGATCTCTTCGGAGACATGAGCACTGAGATCTGGTGGGTCATCGGTATGGCAGGATGGGGTTACATCCTCTATGCACTCTGGGCTGGAGATGTCAAGGAGGCATCAGAGTCCGGGAGCGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTATCTGTAGGGTGGGCTATTTACCCA MLAATVFFLVERQNVDDKWKTSMTVAALVTGVAWYHYTYMREVAVMEGGGSPPVYRYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMAASIVMLVAGFFGESGAWDLFGDMSTEIWWVIGMAGWGYILYALWAGDVKEASESGSDGVQFAFTSMRWIVSVGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACTGTATTCTTCTTGGTCGAGAGACAGAACGTGGATGACAAGTGGAAGACTTCCATGACGGTGGCCGCTCTGGTCACTGGTGTGGCATGGTACCACTACACCTACATGCGTGAGGTCGCAGTGATGGAAGGAGGCGGATCACCGCCAGTCTACAGGTACATTGACTGG------------------------CTGATCACAGTGCCACTACAGGTAGTCGAGTTCTATCTGATAATGGCAGCT---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGAAAC---CTGATGGCAGCATCAATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAG---------TCT------------------GGA------GCT---------------------------------TGG------GATCTC------TTCGGA---------GAC---------------------------ATGAGCACT------------------GAGATCTGG---TGGGTCATCGGTATGGCAGGATGGGGTTACATCCTCTATGCACTC---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGAG------TCC---GGGAGCGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTATCTGTA---------------------------------------------------------------GGGTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------MLAATVFFLVERQNVDDKWKTSMTVAALVTGVAWYHYTYMREVAVMEGGGSPPVYRYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------W--DL--FG---D---------MST------EIW-WVIGMAGWGYILYAL-----W--A-GDVKE-ASE--S-GSDGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ339259 [unk-euryarch-HF70_59C08] clone_S-S80M-A9_DQ339259 gi|85681493|gb|DQ339259| Uncultured bacterium clone S-S80M-A9 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-A9 predicted proteorhodopsin gene, partial cds. DQ339259 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATCACCGTGCCACTTCAAGTAGTCGAGTTCTACCTGATTATGGCAGCTATCGGAGCAGCCACCTTCGCCATGTTCAGGAACCTGATGACAGCATCGATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAGTCTGGGGCTTGGGATCTCTTCGGAGACTCTAGCACCGAGATCTGGTGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTCTGGGCTGGAGATGTCAAGGAGGCATCAGAGTCCGGGAGCGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTGTCCGTCGGCTGGGCAATCTACCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMTASIVMLVAGFFGESGAWDLFGDSSTEIWWVIGMAGWGYILYALWAGDVKEASESGSDGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACCGTGCCACTTCAAGTAGTCGAGTTCTACCTGATTATGGCAGCT---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGGAAC---CTGATGACAGCATCGATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAG---------TCT------------------GGG------GCT---------------------------------TGG------GATCTC------TTCGGA---------GAC---------------------------TCTAGCACC------------------GAGATCTGG---TGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTC---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGAG------TCC---GGGAGCGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTGTCCGTC---------------------------------------------------------------GGCTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMTASIVMLVAGFFGE---S------G--A-----------W--DL--FG---D---------SST------EIW-WVIGMAGWGYILYAL-----W--A-GDVKE-ASE--S-GSDGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ339286 [unk-euryarch-HF70_59C08] clone_S-S80M-D6_DQ339286 gi|85681547|gb|DQ339286| Uncultured bacterium clone S-S80M-D6 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-D6 predicted proteorhodopsin gene, partial cds. DQ339286 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATCACCGTGCCACTTCAAGTAGTCGAGTTCTACCTGATTATGGCAGCTATCGGAGCAGCCACCTTCGCCATGTTCAGGAACCTGATGACAGCATCGATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAGTCTGGGGCTTGGGATCTCTTCGGAGACTCTAGCACCGAGATCTGGTGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTCTGGGCTGGAGATGTCAAGGAGGCATCAGAGTCCGGGAGCGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTGTCCGTCGGCTGGGCCATATACCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMTASIVMLVAGFFGESGAWDLFGDSSTEIWWVIGMAGWGYILYALWAGDVKEASESGSDGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACCGTGCCACTTCAAGTAGTCGAGTTCTACCTGATTATGGCAGCT---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGGAAC---CTGATGACAGCATCGATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAG---------TCT------------------GGG------GCT---------------------------------TGG------GATCTC------TTCGGA---------GAC---------------------------TCTAGCACC------------------GAGATCTGG---TGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTC---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGAG------TCC---GGGAGCGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTGTCCGTC---------------------------------------------------------------GGCTGG---------GCCATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMTASIVMLVAGFFGE---S------G--A-----------W--DL--FG---D---------SST------EIW-WVIGMAGWGYILYAL-----W--A-GDVKE-ASE--S-GSDGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ339263 [unk-euryarch-HF70_59C08] clone_S-S80M-B2_DQ339263 gi|85681501|gb|DQ339263| Uncultured bacterium clone S-S80M-B2 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-B2 predicted proteorhodopsin gene, partial cds. DQ339263 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATCACCGTGCCACTTCAAGTAGTCGAGTTCTACCTGATTATGGCAGCTATCGGAGCAGCCACCTTCGCCATGTTCAGGAACCTGATGACAGCATCGATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAGTCTGGGGCTTGGGATCTCTTCGGAGACTCTAGCACCGAGATCTGGTGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTCTGGGCTGGAGATGTCAAGGAGGCATCAGAGTCCGGGAGCGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTGTCCGTCGGGTGGGCAATTTACCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMTASIVMLVAGFFGESGAWDLFGDSSTEIWWVIGMAGWGYILYALWAGDVKEASESGSDGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACCGTGCCACTTCAAGTAGTCGAGTTCTACCTGATTATGGCAGCT---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGGAAC---CTGATGACAGCATCGATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAG---------TCT------------------GGG------GCT---------------------------------TGG------GATCTC------TTCGGA---------GAC---------------------------TCTAGCACC------------------GAGATCTGG---TGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTC---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGAG------TCC---GGGAGCGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTGTCCGTC---------------------------------------------------------------GGGTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMTASIVMLVAGFFGE---S------G--A-----------W--DL--FG---D---------SST------EIW-WVIGMAGWGYILYAL-----W--A-GDVKE-ASE--S-GSDGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203751 [unk-euryarch-HF70_59C08] SS114a0C1_env_samples_DQ203751 gi|77547950|gb|DQ203751| Uncultured bacterium clone SS114a0C1 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0C1 predicted proteorhodopsin gene, partial cds DQ203751 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTGATCACCGTGCCACTTCAAGTAGTCGAGTTCTACCTGATTATGGCAGCTATCGGAGCAGCCACCTTCGCCATGTTCAGGAACCTGATGACAGCATCGATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAGTCTGGGGCTTGGGATCTCTTCGGAGACTCTAGCACCGAGATCTGGTGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTCTGGGCTGGAGATGTCAAGGAGGCATCAGAGTCCGGGAGCGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTGTCCGTCGGGTGGGCAATTTATCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMTASIVMLVAGFFGESGAWDLFGDSSTEIWWVIGMAGWGYILYALWAGDVKEASESGSDGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTGATCACCGTGCCACTTCAAGTAGTCGAGTTCTACCTGATTATGGCAGCT---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGGAAC---CTGATGACAGCATCGATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAG---------TCT------------------GGG------GCT---------------------------------TGG------GATCTC------TTCGGA---------GAC---------------------------TCTAGCACC------------------GAGATCTGG---TGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTC---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGAG------TCC---GGGAGCGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTGTCCGTC---------------------------------------------------------------GGGTGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMTASIVMLVAGFFGE---S------G--A-----------W--DL--FG---D---------SST------EIW-WVIGMAGWGYILYAL-----W--A-GDVKE-ASE--S-GSDGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ339326 [unk-euryarch-HF70_59C08] clone_S-S80M-H12_DQ339326 gi|85681625|gb|DQ339326| Uncultured bacterium clone S-S80M-H12 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-H12 predicted proteorhodopsin gene, partial cds. DQ339326 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATCACCGTGCCACTTCAAGTAGTCGAGTTCTACCTGATTATGGCAGCTATCGGAGCAGCCACCTTCGCCATGTTCAGGAGCCTGATGACAGCATCGATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAGTCTGGGGCTTGGGATCTCTTCGGAGACTCTAGCACCGAGATCTGGTGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTCTGGGCTGGAGATGTCAAGGAGGCATCAGAGTCCGGGAGCGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTGTCCGTCGGGTGGGCAATTTATCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRSLMTASIVMLVAGFFGESGAWDLFGDSSTEIWWVIGMAGWGYILYALWAGDVKEASESGSDGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACCGTGCCACTTCAAGTAGTCGAGTTCTACCTGATTATGGCAGCT---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGGAGC---CTGATGACAGCATCGATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAG---------TCT------------------GGG------GCT---------------------------------TGG------GATCTC------TTCGGA---------GAC---------------------------TCTAGCACC------------------GAGATCTGG---TGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTC---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGAG------TCC---GGGAGCGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTGTCCGTC---------------------------------------------------------------GGGTGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRS-LMTASIVMLVAGFFGE---S------G--A-----------W--DL--FG---D---------SST------EIW-WVIGMAGWGYILYAL-----W--A-GDVKE-ASE--S-GSDGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ339330 [unk-euryarch-HF70_59C08] clone_S-S80M-H5_DQ339330 gi|85681633|gb|DQ339330| Uncultured bacterium clone S-S80M-H5 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-H5 predicted proteorhodopsin gene, partial cds. DQ339330 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATCACCGTGCCACTTCAAGTAGTCGAGTTCTACCTGATTATGGCAGCTATCGGAGCAGCCACCTTCGCCATGTTCAGGAACCTGATGACAGCATCGATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAGTCTGGGGCTTGGGATCTCTTCGGAGACTCTAGCACCGAGATCTGGTGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTCTGGGCTGGAGATGTCAAGGAGGCATCAGAGTCCGGGAGCGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTGTCCGTCGGGTGGGCCATTTATCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMTASIVMLVAGFFGESGAWDLFGDSSTEIWWVIGMAGWGYILYALWAGDVKEASESGSDGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACCGTGCCACTTCAAGTAGTCGAGTTCTACCTGATTATGGCAGCT---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGGAAC---CTGATGACAGCATCGATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAG---------TCT------------------GGG------GCT---------------------------------TGG------GATCTC------TTCGGA---------GAC---------------------------TCTAGCACC------------------GAGATCTGG---TGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTC---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGAG------TCC---GGGAGCGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTGTCCGTC---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMTASIVMLVAGFFGE---S------G--A-----------W--DL--FG---D---------SST------EIW-WVIGMAGWGYILYAL-----W--A-GDVKE-ASE--S-GSDGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ339285 [unk-euryarch-HF70_59C08] clone_S-S80M-D5_DQ339285 gi|85681545|gb|DQ339285| Uncultured bacterium clone S-S80M-D5 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-D5 predicted proteorhodopsin gene, partial cds. DQ339285 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGACCACCGTGCCACTTCAAGTAGTCGAGTTCTACCTGATTATGGCAGCTATCGGAGCAGCCACCTTCGCCATGTTCAGGAACCTGATGACAGCATCGATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAGTCTGGGGCTTGGGATCTCTTCGGAGACTCTAGCACCGAGATCTGGTGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTCTGGGCTGGAGATGTCAAGGAGGCATCAGAGTCCGGGAGCGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTGTCCGTCGGGTGGGCCATCTATCCA RYIDWLTTVPLQVVEFYLIMAAIGAATFAMFRNLMTASIVMLVAGFFGESGAWDLFGDSSTEIWWVIGMAGWGYILYALWAGDVKEASESGSDGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGACCACCGTGCCACTTCAAGTAGTCGAGTTCTACCTGATTATGGCAGCT---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGGAAC---CTGATGACAGCATCGATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAG---------TCT------------------GGG------GCT---------------------------------TGG------GATCTC------TTCGGA---------GAC---------------------------TCTAGCACC------------------GAGATCTGG---TGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTC---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGAG------TCC---GGGAGCGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTGTCCGTC---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LTTVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMTASIVMLVAGFFGE---S------G--A-----------W--DL--FG---D---------SST------EIW-WVIGMAGWGYILYAL-----W--A-GDVKE-ASE--S-GSDGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203831 [unk-euryarch-HF70_59C08] SS114a40F10_env_samples_DQ203831 gi|77548110|gb|DQ203831| Uncultured bacterium clone SS114a40F10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40F10 predicted proteorhodopsin gene, partial cds DQ203831 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGCTACATAGACTGGCTGATCACCGTGCCACTTCAGGTAGTCGAGTTCTACCTGATTATGGCAGCTATTGGAGCAGCCACCTTCGCCATGTTCAGGAACCTGATGACAGCATCGATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAGTCTGGGGCTTGGGATCTCTTCGGAGACTCTAGCACCGAGATCTGGTGGGCCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTCTGGGCTGGAGATGTCAAGGAGGCATCAGAGTCCGGGAGCGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTGTCCGTCGGGTGGGCCATATATCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMTASIVMLVAGFFGESGAWDLFGDSSTEIWWAIGMAGWGYILYALWAGDVKEASESGSDGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTACATAGACTGG------------------------CTGATCACCGTGCCACTTCAGGTAGTCGAGTTCTACCTGATTATGGCAGCT---------ATT---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGGAAC---CTGATGACAGCATCGATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAG---------TCT------------------GGG------GCT---------------------------------TGG------GATCTC------TTCGGA---------GAC---------------------------TCTAGCACC------------------GAGATCTGG---TGGGCCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTC---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGAG------TCC---GGGAGCGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTGTCCGTC---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMTASIVMLVAGFFGE---S------G--A-----------W--DL--FG---D---------SST------EIW-WAIGMAGWGYILYAL-----W--A-GDVKE-ASE--S-GSDGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ339303 [unk-euryarch-HF70_59C08] clone_S-S80M-F11_DQ339303 gi|85681579|gb|DQ339303| Uncultured bacterium clone S-S80M-F11 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-F11 predicted proteorhodopsin gene, partial cds. DQ339303 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGCTACATAGACTGGCTGATCACCGTGCCACTTCAGGTAGTCGAGTTCTACCTGATTATGGCAGCTATCGGAGCAGCCACCTTCGCCATGTTCAGGAACCTGATGACAGCATCGATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAGTCTGGGGCTTGGGATCTCTTCGGAGACTCAAGCACCGAGATCTGGTGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTCTGGGCTGGAGATGTCAAGGAGGCATCAGAGTCCGGGAGCGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTGTCCGTCGGGTGGGCCATATATCCA SYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMTASIVMLVAGFFGESGAWDLFGDSSTEIWWVIGMAGWGYILYALWAGDVKEASESGSDGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATAGACTGG------------------------CTGATCACCGTGCCACTTCAGGTAGTCGAGTTCTACCTGATTATGGCAGCT---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGGAAC---CTGATGACAGCATCGATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAG---------TCT------------------GGG------GCT---------------------------------TGG------GATCTC------TTCGGA---------GAC---------------------------TCAAGCACC------------------GAGATCTGG---TGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTC---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGAG------TCC---GGGAGCGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTGTCCGTC---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMTASIVMLVAGFFGE---S------G--A-----------W--DL--FG---D---------SST------EIW-WVIGMAGWGYILYAL-----W--A-GDVKE-ASE--S-GSDGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ339295 [unk-euryarch-HF70_59C08] clone_S-S80M-E4_DQ339295 gi|85681563|gb|DQ339295| Uncultured bacterium clone S-S80M-E4 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-E4 predicted proteorhodopsin gene, partial cds. DQ339295 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATCACCGTGCCACTTCAAGTAGTCGAGTTCTACCTGATTATGGCAGCTATCGGAGCAGCCACCTTCGCCATGTTCAGGAACCTGATGACAGCATCGATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAGTCTGGGGCTTGGGATCTCTTCGGAGACTCTAGCACCGAGATCTGGTGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTCTGGGCTGGAGATGTCAAGGAGGCATCAGAGTCCGGGAGCGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTGTCCGTCGGGTGGGCCATATATCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMTASIVMLVAGFFGESGAWDLFGDSSTEIWWVIGMAGWGYILYALWAGDVKEASESGSDGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATCACCGTGCCACTTCAAGTAGTCGAGTTCTACCTGATTATGGCAGCT---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGGAAC---CTGATGACAGCATCGATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAG---------TCT------------------GGG------GCT---------------------------------TGG------GATCTC------TTCGGA---------GAC---------------------------TCTAGCACC------------------GAGATCTGG---TGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTC---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGAG------TCC---GGGAGCGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTGTCCGTC---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMTASIVMLVAGFFGE---S------G--A-----------W--DL--FG---D---------SST------EIW-WVIGMAGWGYILYAL-----W--A-GDVKE-ASE--S-GSDGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203818 [unk-euryarch-HF70_59C08] SS114a40D3_env_samples_DQ203818 gi|77548084|gb|DQ203818| Uncultured bacterium clone SS114a40D3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40D3 predicted proteorhodopsin gene, partial cds DQ203818 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGACTGGTTGATCACCGTGCCACTTCAGGTAGTCGAGTTCTACCTGATTATGGCAGCTATCGGAGCAGCCACCTTCGCCATGTTCAGGAACCTGATGACAGCATCGATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAGTCTGGGGCTTGGGATCTCTTCGGAGACTCTAGCACCGAGATCTGGTGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTCTGGGCTGGAGATGTCAAGGAGGCATCAGAGTCCGGGAGCGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTGTCCGTAGGGTGGGCCATATACCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMTASIVMLVAGFFGESGAWDLFGDSSTEIWWVIGMAGWGYILYALWAGDVKEASESGSDGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGACTGG------------------------TTGATCACCGTGCCACTTCAGGTAGTCGAGTTCTACCTGATTATGGCAGCT---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGGAAC---CTGATGACAGCATCGATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAG---------TCT------------------GGG------GCT---------------------------------TGG------GATCTC------TTCGGA---------GAC---------------------------TCTAGCACC------------------GAGATCTGG---TGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTC---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGAG------TCC---GGGAGCGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTGTCCGTA---------------------------------------------------------------GGGTGG---------GCCATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMTASIVMLVAGFFGE---S------G--A-----------W--DL--FG---D---------SST------EIW-WVIGMAGWGYILYAL-----W--A-GDVKE-ASE--S-GSDGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203681 [unk-euryarch-HF70_59C08] medHO155C10_env_samples_DQ203681 gi|77547810|gb|DQ203681| Uncultured bacterium clone medHO155C10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155C10 predicted proteorhodopsin gene, partial cds DQ203681 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTGATTACCGTGCCACTTCAGGTAGTCGAGTTCTACTTGATTATGGCAGCTATCGGAGCAGCCACCTTCGCCATGTTCAGGAACCTGATGGCAGCATCGATCGTGATGCTCGTAACTGGTTTCTTCGGCGAGTCTGGGGCTTGGGAACTCTTCGGAGACATGAGCACTGAGATCTGGTGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTCTGGGCTGGAGATGTCAAGGAGGCATCAGAGTCCGGGAGCGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTGTCCGTCGGGTGGGCAATTTACCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMAASIVMLVTGFFGESGAWELFGDMSTEIWWVIGMAGWGYILYALWAGDVKEASESGSDGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTGATTACCGTGCCACTTCAGGTAGTCGAGTTCTACTTGATTATGGCAGCT---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGGAAC---CTGATGGCAGCATCGATCGTGATGCTCGTAACTGGTTTCTTCGGCGAG---------TCT------------------GGG------GCT---------------------------------TGG------GAACTC------TTCGGA---------GAC---------------------------ATGAGCACT------------------GAGATCTGG---TGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTC---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGAG------TCC---GGGAGCGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTGTCCGTC---------------------------------------------------------------GGGTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMAASIVMLVTGFFGE---S------G--A-----------W--EL--FG---D---------MST------EIW-WVIGMAGWGYILYAL-----W--A-GDVKE-ASE--S-GSDGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203769 [unk-euryarch-HF70_59C08] SS114a0E4_env_samples_DQ203769 gi|77547986|gb|DQ203769| Uncultured bacterium clone SS114a0E4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0E4 predicted proteorhodopsin gene, partial cds DQ203769 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGATTGGCTGATCACCGTGCCACTTCAGGTAGTCGAGTTCTACCTGATTATGGCAGCTATCGGAGCAGCCACCTTCGCCATGTTCAGGAACCTGATGGGAGCATCAATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAGTCTGGAGCTTGGGATCTCTTCGGAGACTCGAGCACTGAGATCTGGTGGGTCATCGGCATGGCAGGATGGGGGTACATCCTCTATGCACTCTGGGCTGGAGATGTCAAGGAGGCATCAGCGTCCGGAAGTGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTGTCCGTCGGGTGGGCCATATATCCA SYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMGASIVMLVAGFFGESGAWDLFGDSSTEIWWVIGMAGWGYILYALWAGDVKEASASGSDGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGATTGG------------------------CTGATCACCGTGCCACTTCAGGTAGTCGAGTTCTACCTGATTATGGCAGCT---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGGAAC---CTGATGGGAGCATCAATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAG---------TCT------------------GGA------GCT---------------------------------TGG------GATCTC------TTCGGA---------GAC---------------------------TCGAGCACT------------------GAGATCTGG---TGGGTCATCGGCATGGCAGGATGGGGGTACATCCTCTATGCACTC---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGCG------TCC---GGAAGTGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTGTCCGTC---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMGASIVMLVAGFFGE---S------G--A-----------W--DL--FG---D---------SST------EIW-WVIGMAGWGYILYAL-----W--A-GDVKE-ASA--S-GSDGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203785 [unk-euryarch-HF70_59C08] SS114a0G5_env_samples_DQ203785 gi|77548018|gb|DQ203785| Uncultured bacterium clone SS114a0G5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0G5 predicted proteorhodopsin gene, partial cds DQ203785 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGACTGGCTGATTACCGTGCCACTTCAGGTAGTTGAGTTCTACTTGATTATGGCAGCCATCGGAGCAGCCACCTTCGCCATGTTCAGGAACCTGACGGCAGCATCAATCGTGATGCTAGTAGCTGGTTTCTTCGGCGAGTCTGGAGCTTGGGAACTCTTCGGAGACATGAGCACTGAGATCTGGTGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTATGGGCTGGAGATGTCAAGGAGGCATCAGAGTCCGGGAGCGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTGTCCGTCGGGTGGGCCATTTACCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLTAASIVMLVAGFFGESGAWELFGDMSTEIWWVIGMAGWGYILYALWAGDVKEASESGSDGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGACTGG------------------------CTGATTACCGTGCCACTTCAGGTAGTTGAGTTCTACTTGATTATGGCAGCC---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGGAAC---CTGACGGCAGCATCAATCGTGATGCTAGTAGCTGGTTTCTTCGGCGAG---------TCT------------------GGA------GCT---------------------------------TGG------GAACTC------TTCGGA---------GAC---------------------------ATGAGCACT------------------GAGATCTGG---TGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTA---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGAG------TCC---GGGAGCGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTGTCCGTC---------------------------------------------------------------GGGTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LTAASIVMLVAGFFGE---S------G--A-----------W--EL--FG---D---------MST------EIW-WVIGMAGWGYILYAL-----W--A-GDVKE-ASE--S-GSDGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ339329 [unk-euryarch-HF70_59C08] clone_S-S80M-H4_DQ339329 gi|85681631|gb|DQ339329| Uncultured bacterium clone S-S80M-H4 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-H4 predicted proteorhodopsin gene, partial cds. DQ339329 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTGATTACCGTGCCACTTCAGGTAGTTGAGTTCTACTTGATTATGGCAGCTATCGGAGCAGCCACCTTCGCCATGTTCAGGAACCTGATGGCAGCATCAATCGTGATGCTAGTAGCTGGTTTCTTCGGCGAGTCTGGAGCTTGGGAACTCTTCGGAGACATGAGCACTGAGATCTGGTGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTATGGGCTGGAGATGTCAAGGAGGCATCAGAGTCCGGGAGCGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTGTCCGTCGGGTGGGCCATTTACCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMAASIVMLVAGFFGESGAWELFGDMSTEIWWVIGMAGWGYILYALWAGDVKEASESGSDGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTGATTACCGTGCCACTTCAGGTAGTTGAGTTCTACTTGATTATGGCAGCT---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGGAAC---CTGATGGCAGCATCAATCGTGATGCTAGTAGCTGGTTTCTTCGGCGAG---------TCT------------------GGA------GCT---------------------------------TGG------GAACTC------TTCGGA---------GAC---------------------------ATGAGCACT------------------GAGATCTGG---TGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTA---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGAG------TCC---GGGAGCGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTGTCCGTC---------------------------------------------------------------GGGTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------W--EL--FG---D---------MST------EIW-WVIGMAGWGYILYAL-----W--A-GDVKE-ASE--S-GSDGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ339291 [unk-euryarch-HF70_59C08] clone_S-S80M-E10_DQ339291 gi|85681555|gb|DQ339291| Uncultured bacterium clone S-S80M-E10 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-E10 predicted proteorhodopsin gene, partial cds. DQ339291 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATTACCGTGCCACTTCAGGTAGTTGAGTTCTACTTGATTATGGCAGCTATCGGAGCAGCCACCTTCGCCATGTTCAGGAACCTGATGGCAGCATCAATCGTGATGCTAGTAGCTGGTTTCTTCGGCGAGTCTGGAGCTTGGGAACTCTTCGGAGACATGAGCACTGAGATCTGGTGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTATGGGCTGGAGATGTCAAGGAGGCATCAGAGTCCGGGAGCGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTGTCCGTCGGGTGGGCCATTTATCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMAASIVMLVAGFFGESGAWELFGDMSTEIWWVIGMAGWGYILYALWAGDVKEASESGSDGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATTACCGTGCCACTTCAGGTAGTTGAGTTCTACTTGATTATGGCAGCT---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGGAAC---CTGATGGCAGCATCAATCGTGATGCTAGTAGCTGGTTTCTTCGGCGAG---------TCT------------------GGA------GCT---------------------------------TGG------GAACTC------TTCGGA---------GAC---------------------------ATGAGCACT------------------GAGATCTGG---TGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTA---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGAG------TCC---GGGAGCGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTGTCCGTC---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------W--EL--FG---D---------MST------EIW-WVIGMAGWGYILYAL-----W--A-GDVKE-ASE--S-GSDGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203307 [unk-euryarch-HF70_59C08] SS114a80B4_env_samples_DQ203307 gi|77547062|gb|DQ203307| Uncultured bacterium clone SS114a80B4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a80B4 predicted proteorhodopsin gene, partial cds DQ203307 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_80m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_2003 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTGATTACCGTGCCACTTCAGGTAGTTGAGTTCTACTTGATTATGGCAGCTATCGGAGCAGCCACCTTCGCCATGTTCAGGAACCTGATGGCAGCATCAATCGTGATGCTAGTAGCTGGTTTCTTCGGCGAGTCTGGAGCTTGGGAACTCTTCGGAGACATGAGCACTGAGATCTGGTGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTATGGGCTGGAGATGTCAAGGAGGCATCAGAGTCCGGGAGCGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTGTCCGTCGGGTGGGCTATATATCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMAASIVMLVAGFFGESGAWELFGDMSTEIWWVIGMAGWGYILYALWAGDVKEASESGSDGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTGATTACCGTGCCACTTCAGGTAGTTGAGTTCTACTTGATTATGGCAGCT---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGGAAC---CTGATGGCAGCATCAATCGTGATGCTAGTAGCTGGTTTCTTCGGCGAG---------TCT------------------GGA------GCT---------------------------------TGG------GAACTC------TTCGGA---------GAC---------------------------ATGAGCACT------------------GAGATCTGG---TGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTA---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGAG------TCC---GGGAGCGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTGTCCGTC---------------------------------------------------------------GGGTGG---------GCTATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------W--EL--FG---D---------MST------EIW-WVIGMAGWGYILYAL-----W--A-GDVKE-ASE--S-GSDGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203742 [unk-euryarch-HF70_59C08] SS114a0A5_env_samples_DQ203742 gi|77547932|gb|DQ203742| Uncultured bacterium clone SS114a0A5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0A5 predicted proteorhodopsin gene, partial cds DQ203742 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATAGACTGGCTGATTACCGTGCCACTTCAGGTAGTTGAGTTCTACTTGATTATGGCAGCTATCGGAGCAGCCACCTTCGCCATGTTCAGGAACCTGATGGCAGCATCAATCGTGATGCTAGTAGCTGGTTCCTTCGGCGAGTCTGGAGCTTGGGAACTCTTCGGAGACATGAGCACTGAGATCTGGTGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTATGGGCTGGAGATGTCAAGGAGGCATCAGAGTCCGGGAGCGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTGTCCGTCGGGTGGGCCATATATCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMAASIVMLVAGSFGESGAWELFGDMSTEIWWVIGMAGWGYILYALWAGDVKEASESGSDGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATTACCGTGCCACTTCAGGTAGTTGAGTTCTACTTGATTATGGCAGCT---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGGAAC---CTGATGGCAGCATCAATCGTGATGCTAGTAGCTGGTTCCTTCGGCGAG---------TCT------------------GGA------GCT---------------------------------TGG------GAACTC------TTCGGA---------GAC---------------------------ATGAGCACT------------------GAGATCTGG---TGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTA---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGAG------TCC---GGGAGCGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTGTCCGTC---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMAASIVMLVAGSFGE---S------G--A-----------W--EL--FG---D---------MST------EIW-WVIGMAGWGYILYAL-----W--A-GDVKE-ASE--S-GSDGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ339292 [unk-euryarch-HF70_59C08] clone_S-S80M-E11_DQ339292 gi|85681557|gb|DQ339292| Uncultured bacterium clone S-S80M-E11 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-E11 predicted proteorhodopsin gene, partial cds. DQ339292 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATTACCGTGCCACTTCAGGTAGTTGAGTTCTACTTGATTATGGCAGCTATCGGAGCAGCCACCTTCGCCATGTTCAGGAACCTGATGGCAGCATCAATCGTGATGCTAGTAGCTGGTTTCTTCGGCGAGTCTGGAGCTTGGGAACTCTTCGGAGACATGAGCACTGAGATCTGGTGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTATGGGCTGGAGATGTCAAGGAGGCATCAGAGTCCGGGAGCGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTGTCCGTCGGGTGGGCCATATACCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMAASIVMLVAGFFGESGAWELFGDMSTEIWWVIGMAGWGYILYALWAGDVKEASESGSDGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATTACCGTGCCACTTCAGGTAGTTGAGTTCTACTTGATTATGGCAGCT---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGGAAC---CTGATGGCAGCATCAATCGTGATGCTAGTAGCTGGTTTCTTCGGCGAG---------TCT------------------GGA------GCT---------------------------------TGG------GAACTC------TTCGGA---------GAC---------------------------ATGAGCACT------------------GAGATCTGG---TGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTA---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGAG------TCC---GGGAGCGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTGTCCGTC---------------------------------------------------------------GGGTGG---------GCCATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------W--EL--FG---D---------MST------EIW-WVIGMAGWGYILYAL-----W--A-GDVKE-ASE--S-GSDGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203337 [unk-euryarch-HF70_59C08] SS114a80G8_env_samples_DQ203337 gi|77547122|gb|DQ203337| Uncultured bacterium clone SS114a80G8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a80G8 predicted proteorhodopsin gene, partial cds DQ203337 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_80m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_2003 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTACATTGACTGGCTGATTACCGTGCCACTTCAGGTAGTTGAGTTCTACTTGATTATGGCAGCTATCGGAGCAGCCACCTTCGCCATGTTCAGGAACCTGATGGCAGCATCAATCGTGATGCTAGTAGCTGGTTTCTTCGGCGAGTCTGGAGCTTGGGAACTCTTCGGAGACATGAGCACTGAGATCTGGTGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTATGGGCTGGAGATGTCAAGGAGGCATCAGAGTCCGGGAGCGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTGTCCGTCGGGTGGGCCATCTATCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMAASIVMLVAGFFGESGAWELFGDMSTEIWWVIGMAGWGYILYALWAGDVKEASESGSDGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATTGACTGG------------------------CTGATTACCGTGCCACTTCAGGTAGTTGAGTTCTACTTGATTATGGCAGCT---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGGAAC---CTGATGGCAGCATCAATCGTGATGCTAGTAGCTGGTTTCTTCGGCGAG---------TCT------------------GGA------GCT---------------------------------TGG------GAACTC------TTCGGA---------GAC---------------------------ATGAGCACT------------------GAGATCTGG---TGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTA---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGAG------TCC---GGGAGCGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTGTCCGTC---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------W--EL--FG---D---------MST------EIW-WVIGMAGWGYILYAL-----W--A-GDVKE-ASE--S-GSDGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ339272 [unk-euryarch-HF70_59C08] clone_S-S80M-C11_DQ339272 gi|85681519|gb|DQ339272| Uncultured bacterium clone S-S80M-C11 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-C11 predicted proteorhodopsin gene, partial cds. DQ339272 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATTACCGTGCCACTTCAGGTAGTCGAGTTCTACTTGATTATGGCAGCTATCGGAGCAGCCACCTTCGCCATGTTCAGGAACCTGATGGCAGCATCGATCGTGATGCTCGTAGCTGGTTTCTTCGGCGAGTCTGGAGCTTGGGATCTCTTCGGAGACATGAGCACTGAGATCTGGTGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTATGGGCTGGAGATGTCAAGGAGGCATCAGAGTCCGGGAGCGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTATCTGTCGGCTGGGCCATCTATCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMAASIVMLVAGFFGESGAWDLFGDMSTEIWWVIGMAGWGYILYALWAGDVKEASESGSDGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATTACCGTGCCACTTCAGGTAGTCGAGTTCTACTTGATTATGGCAGCT---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGGAAC---CTGATGGCAGCATCGATCGTGATGCTCGTAGCTGGTTTCTTCGGCGAG---------TCT------------------GGA------GCT---------------------------------TGG------GATCTC------TTCGGA---------GAC---------------------------ATGAGCACT------------------GAGATCTGG---TGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTA---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGAG------TCC---GGGAGCGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTATCTGTC---------------------------------------------------------------GGCTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------W--DL--FG---D---------MST------EIW-WVIGMAGWGYILYAL-----W--A-GDVKE-ASE--S-GSDGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ339297 [unk-euryarch-HF70_59C08] clone_S-S80M-E6_DQ339297 gi|85681567|gb|DQ339297| Uncultured bacterium clone S-S80M-E6 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-E6 predicted proteorhodopsin gene, partial cds. DQ339297 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATTACCGTGCCACTTCAGGTAGTCGAGTTCTACTTGATTATGGCAGCTATCGGAGCAGCCACCTTCGCCATGTTCAGGAACCTGATGGCAGCATCGATCGTGATGCTCGTAGCTGGTTTCTTCGGCGAGTCTGGAGCTTGGGATCTCTTCGGAGACATGAGCACTGAGATCTGGTGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTATGGGCTGGAGATGTCAAGGAGGCATCAGAGTCCGGGAGCGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTATCTGTCGGGTGGGCCATTTATCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMAASIVMLVAGFFGESGAWDLFGDMSTEIWWVIGMAGWGYILYALWAGDVKEASESGSDGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATTACCGTGCCACTTCAGGTAGTCGAGTTCTACTTGATTATGGCAGCT---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGGAAC---CTGATGGCAGCATCGATCGTGATGCTCGTAGCTGGTTTCTTCGGCGAG---------TCT------------------GGA------GCT---------------------------------TGG------GATCTC------TTCGGA---------GAC---------------------------ATGAGCACT------------------GAGATCTGG---TGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTA---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGAG------TCC---GGGAGCGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTATCTGTC---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------W--DL--FG---D---------MST------EIW-WVIGMAGWGYILYAL-----W--A-GDVKE-ASE--S-GSDGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ339261 [unk-euryarch-HF70_59C08] clone_S-S80M-B10_DQ339261 gi|85681497|gb|DQ339261| Uncultured bacterium clone S-S80M-B10 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-B10 predicted proteorhodopsin gene, partial cds. DQ339261 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTGATTACCGTGCCACTTCAGGTAGTCGAGTTCTACTTGATTATGGCAGCTATCGGAGCAGCCACCTTCGCCATGTTCAGGAACCTGATGGCAGCATCGATCGTGATGCTCGTAACTGGTTTCTTCGGCGAGTCTGGAGCTTGGGATCTCTTCGGAGACATGAGCACTGAGATCTGGTGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTATGGGCTGGAGATGTCAAGGAGGCATCAGAGTCCGGGAGCGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTATCTGTCGGGTGGGCAATCTATCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMAASIVMLVTGFFGESGAWDLFGDMSTEIWWVIGMAGWGYILYALWAGDVKEASESGSDGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTGATTACCGTGCCACTTCAGGTAGTCGAGTTCTACTTGATTATGGCAGCT---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGGAAC---CTGATGGCAGCATCGATCGTGATGCTCGTAACTGGTTTCTTCGGCGAG---------TCT------------------GGA------GCT---------------------------------TGG------GATCTC------TTCGGA---------GAC---------------------------ATGAGCACT------------------GAGATCTGG---TGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTA---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGAG------TCC---GGGAGCGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTATCTGTC---------------------------------------------------------------GGGTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMAASIVMLVTGFFGE---S------G--A-----------W--DL--FG---D---------MST------EIW-WVIGMAGWGYILYAL-----W--A-GDVKE-ASE--S-GSDGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ339294 [unk-euryarch-HF70_59C08] clone_S-S80M-E3_DQ339294 gi|85681561|gb|DQ339294| Uncultured bacterium clone S-S80M-E3 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-E3 predicted proteorhodopsin gene, partial cds. DQ339294 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTGATTACCGTGCCACTTCAGGTAGTCGAGTTCTACTTGATTATGGCAGCTATCGGAGCAGCCACCTTCGCCATGTTCAGGAACCTGATGGCAGCATCGATCGTGATGCTCGTAGCTGGTTTCTTCGGCGAGTCTGGAGCTTGGGATCTCTTCGGAGACATGAGCACTGAGATCTGGTGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTATGGGCTGGAGATGTCAAGGAGGCATCAGGGTCCGGGAGCGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTATCTGTCGGGTGGGCCATTTATCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMAASIVMLVAGFFGESGAWDLFGDMSTEIWWVIGMAGWGYILYALWAGDVKEASGSGSDGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTGATTACCGTGCCACTTCAGGTAGTCGAGTTCTACTTGATTATGGCAGCT---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGGAAC---CTGATGGCAGCATCGATCGTGATGCTCGTAGCTGGTTTCTTCGGCGAG---------TCT------------------GGA------GCT---------------------------------TGG------GATCTC------TTCGGA---------GAC---------------------------ATGAGCACT------------------GAGATCTGG---TGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTA---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGGG------TCC---GGGAGCGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTATCTGTC---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------W--DL--FG---D---------MST------EIW-WVIGMAGWGYILYAL-----W--A-GDVKE-ASG--S-GSDGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ339266 [unk-euryarch-HF70_59C08] clone_S-S80M-B6_DQ339266 gi|85681507|gb|DQ339266| Uncultured bacterium clone S-S80M-B6 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-B6 predicted proteorhodopsin gene, partial cds. DQ339266 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGCTACATAGACTGGCTGATTACCGTGCCACTTCAGGTAGTCGAGTTCTACTTGATTATGGCAGCTATCGGAGCAGCCACCTTCGCCATGTTCAGGAACCTGATGGCAGCATCGATCGTGATGCTCGTAGCTGGTTTCTTCGGCGAGTCTGGAGCTTGGGATCTCTTCGGAGACATGAGCACTGAGATCTGGTGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTATGGGCTGGAGATGTCAAGGAGGCATCAGAGTCCGGGAGCGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTATCTGTCGGGTGGGCGATATATCCA SYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMAASIVMLVAGFFGESGAWDLFGDMSTEIWWVIGMAGWGYILYALWAGDVKEASESGSDGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATAGACTGG------------------------CTGATTACCGTGCCACTTCAGGTAGTCGAGTTCTACTTGATTATGGCAGCT---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGGAAC---CTGATGGCAGCATCGATCGTGATGCTCGTAGCTGGTTTCTTCGGCGAG---------TCT------------------GGA------GCT---------------------------------TGG------GATCTC------TTCGGA---------GAC---------------------------ATGAGCACT------------------GAGATCTGG---TGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTA---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGAG------TCC---GGGAGCGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTATCTGTC---------------------------------------------------------------GGGTGG---------GCGATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------W--DL--FG---D---------MST------EIW-WVIGMAGWGYILYAL-----W--A-GDVKE-ASE--S-GSDGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ339267 [unk-euryarch-HF70_59C08] clone_S-S80M-B7_DQ339267 gi|85681509|gb|DQ339267| Uncultured bacterium clone S-S80M-B7 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-B7 predicted proteorhodopsin gene, partial cds. DQ339267 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCATCACCGTGCCTCTTCAGGTAGTAGAATTCTACCTCATCATGGCAGCTATCGGAGCAGCAACCTTCGCCATGTTCAGGAACCTCATGGGAGCATCGATCGTCATGCTAGTAGCCGGATTCTTCGGCGAGTCAGGAGCATGGGATGTCTTCGGAGACATGAGCACCGAGATCTGGTGGGTCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTATGGCAAGGCGACGTCAAGGAGGCATCTGCTTCCGGCAGCGATGGCGTCCAGTTCGCCTTCACCTCGATGAGGTGGATTGTTACCGTCGGGTGGGCTATTTATCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMGASIVMLVAGFFGESGAWDVFGDMSTEIWWVIGMAGWGYILYALWQGDVKEASASGSDGVQFAFTSMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATCACCGTGCCTCTTCAGGTAGTAGAATTCTACCTCATCATGGCAGCT---------ATC---GGAGCAGCAACCTTC---GCCATG------------------------------------TTCAGGAAC---CTCATGGGAGCATCGATCGTCATGCTAGTAGCCGGATTCTTCGGCGAG---------TCA------------------GGA------GCA---------------------------------TGG------GATGTC------TTCGGA---------GAC---------------------------ATGAGCACC------------------GAGATCTGG---TGGGTCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTA---------------TGG------CAA---GGCGACGTCAAGGAG---GCATCTGCT------TCC---GGCAGCGATGGCGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATTGTTACCGTC---------------------------------------------------------------GGGTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMGASIVMLVAGFFGE---S------G--A-----------W--DV--FG---D---------MST------EIW-WVIGMAGWGYILYAL-----W--Q-GDVKE-ASA--S-GSDGV-Q-F-A-F-T-SM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ339312 [unk-euryarch-HF70_59C08] clone_S-S80M-F9_DQ339312 gi|85681597|gb|DQ339312| Uncultured bacterium clone S-S80M-F9 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-F9 predicted proteorhodopsin gene, partial cds. DQ339312 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCATCACCGTGCCTCTTCAGGTAGTAGAATTCTACCTCATCATGGCAGCTATCGGAGCAGCAACCTTCGCCATGTTCAGGAACCTCATGGGAGCATCGATCGTCATGCTAGTAGCCGGATTCTTCGGCGAGTCAGGAGCATGGGATGTCTTCGGAGACATGAGCACCGAGATCTGGTGGGTCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTATGGCAAGGCGACGTCAAGGAGGCATCTGCTTCCGGCAGCGATGGCGTCCAGTTCGCCTTCACCTCGATGAGGTGGATTGTTACCGTCGGGTGGGCCATTTATCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMGASIVMLVAGFFGESGAWDVFGDMSTEIWWVIGMAGWGYILYALWQGDVKEASASGSDGVQFAFTSMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATCACCGTGCCTCTTCAGGTAGTAGAATTCTACCTCATCATGGCAGCT---------ATC---GGAGCAGCAACCTTC---GCCATG------------------------------------TTCAGGAAC---CTCATGGGAGCATCGATCGTCATGCTAGTAGCCGGATTCTTCGGCGAG---------TCA------------------GGA------GCA---------------------------------TGG------GATGTC------TTCGGA---------GAC---------------------------ATGAGCACC------------------GAGATCTGG---TGGGTCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTA---------------TGG------CAA---GGCGACGTCAAGGAG---GCATCTGCT------TCC---GGCAGCGATGGCGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATTGTTACCGTC---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMGASIVMLVAGFFGE---S------G--A-----------W--DV--FG---D---------MST------EIW-WVIGMAGWGYILYAL-----W--Q-GDVKE-ASA--S-GSDGV-Q-F-A-F-T-SM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ339308 [unk-euryarch-HF70_59C08] clone_S-S80M-F5_DQ339308 gi|85681589|gb|DQ339308| Uncultured bacterium clone S-S80M-F5 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-F5 predicted proteorhodopsin gene, partial cds. DQ339308 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCATCACCGTGCCTCTTCAGGTAGTAGAATTCTACCTCATCATGGCAGCTATCGGAGCAGCAACCTTCGCCATGTTCAGGAACCTCATGGGAGCATCGATCGTCATGCTAGTAGCCGGATTCTTCGGCGAGTCAGGAGCATGGGATGTCTTCGGAGACATGAGCACCGAGATCTGGTGGGTCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTATGGCAAGGCGACGTCAAGGAGGCATCTGCTTCCGGCAGCGATGGCGTCCAGTTCGCCTTCACCTCGATGAGGTGGATTGTTACCGTCGGGTGGGCCATTTATCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMGASIVMLVAGFFGESGAWDVFGDMSTEIWWVIGMAGWGYILYALWQGDVKEASASGSDGVQFAFTSMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATCACCGTGCCTCTTCAGGTAGTAGAATTCTACCTCATCATGGCAGCT---------ATC---GGAGCAGCAACCTTC---GCCATG------------------------------------TTCAGGAAC---CTCATGGGAGCATCGATCGTCATGCTAGTAGCCGGATTCTTCGGCGAG---------TCA------------------GGA------GCA---------------------------------TGG------GATGTC------TTCGGA---------GAC---------------------------ATGAGCACC------------------GAGATCTGG---TGGGTCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTA---------------TGG------CAA---GGCGACGTCAAGGAG---GCATCTGCT------TCC---GGCAGCGATGGCGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATTGTTACCGTC---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMGASIVMLVAGFFGE---S------G--A-----------W--DV--FG---D---------MST------EIW-WVIGMAGWGYILYAL-----W--Q-GDVKE-ASA--S-GSDGV-Q-F-A-F-T-SM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ339257 [unk-euryarch-HF70_59C08] clone_S-S80M-A7_DQ339257 gi|85681489|gb|DQ339257| Uncultured bacterium clone S-S80M-A7 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-A7 predicted proteorhodopsin gene, partial cds. DQ339257 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCATCACCGTGCCTCTTCAGGTAGTAGAATTCTACCTCATCATGGCAGCTATCGGAGCAGCAACCTTCGCCATGTTCAGGAACCTCATGGGAGCATCGATCGTCATGCTAGTAGCCGGATTCTTCGGCGAGTCAGGAGCATGGGATGTCTTCGGAGACATGAGCACCGAGATCTGGTGGGTCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTATGGCAAGGCGACGTCAAGGAGGCATCTGCTTCCGGCAGCGATGGCGTCCAGTTCGCCTTCACCTCGATGAGGTGGATTGTTACCGTCGGGTGGGCCATTTATCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMGASIVMLVAGFFGESGAWDVFGDMSTEIWWVIGMAGWGYILYALWQGDVKEASASGSDGVQFAFTSMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATCACCGTGCCTCTTCAGGTAGTAGAATTCTACCTCATCATGGCAGCT---------ATC---GGAGCAGCAACCTTC---GCCATG------------------------------------TTCAGGAAC---CTCATGGGAGCATCGATCGTCATGCTAGTAGCCGGATTCTTCGGCGAG---------TCA------------------GGA------GCA---------------------------------TGG------GATGTC------TTCGGA---------GAC---------------------------ATGAGCACC------------------GAGATCTGG---TGGGTCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTA---------------TGG------CAA---GGCGACGTCAAGGAG---GCATCTGCT------TCC---GGCAGCGATGGCGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATTGTTACCGTC---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMGASIVMLVAGFFGE---S------G--A-----------W--DV--FG---D---------MST------EIW-WVIGMAGWGYILYAL-----W--Q-GDVKE-ASA--S-GSDGV-Q-F-A-F-T-SM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ339324 [unk-euryarch-HF70_59C08] clone_S-S80M-H1_DQ339324 gi|85681621|gb|DQ339324| Uncultured bacterium clone S-S80M-H1 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-H1 predicted proteorhodopsin gene, partial cds. DQ339324 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCATCACCGTGCCTCTTCAGGTAGTAGAATTCTACCTCATCATGGCAGCTATCGGAGCAGCAACCTTCGCCATGTTCAGGAACCTCATGGGAGCATCGATCGTCATGCTAGTAGCCGGATTCTTCGGCGAGTCAGGAGCATGGGATGTCTTCGGAGACATGAGCACCGAGATCTGGTGGGTCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTATGGCAAGGCGACGTCAAGGAGGCATCTGCTTCCGGCAGCGATGGCGTCCAGTTCGCCTTCACCTCGATGAGGTGGATTGTTACCGTCGGGTGGGCCATTTATCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMGASIVMLVAGFFGESGAWDVFGDMSTEIWWVIGMAGWGYILYALWQGDVKEASASGSDGVQFAFTSMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATCACCGTGCCTCTTCAGGTAGTAGAATTCTACCTCATCATGGCAGCT---------ATC---GGAGCAGCAACCTTC---GCCATG------------------------------------TTCAGGAAC---CTCATGGGAGCATCGATCGTCATGCTAGTAGCCGGATTCTTCGGCGAG---------TCA------------------GGA------GCA---------------------------------TGG------GATGTC------TTCGGA---------GAC---------------------------ATGAGCACC------------------GAGATCTGG---TGGGTCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTA---------------TGG------CAA---GGCGACGTCAAGGAG---GCATCTGCT------TCC---GGCAGCGATGGCGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATTGTTACCGTC---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMGASIVMLVAGFFGE---S------G--A-----------W--DV--FG---D---------MST------EIW-WVIGMAGWGYILYAL-----W--Q-GDVKE-ASA--S-GSDGV-Q-F-A-F-T-SM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ339298 [unk-euryarch-HF70_59C08] clone_S-S80M-E7_DQ339298 gi|85681569|gb|DQ339298| Uncultured bacterium clone S-S80M-E7 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-E7 predicted proteorhodopsin gene, partial cds. DQ339298 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCATCACCGTGCCCCTTCAGGTAGTAGAATTCTACCTCATCATGGCAGCTATCGGAGCAGCAACCTTCGCCATGTTCAGGAACCTCATGGGAGCATCGATCGTCATGCTAGTAGCCGGATTCTTCGGCGAGTCAGGAGCATGGGATGTCTTCGGAGACATGAGCACCGAGATCTGGTGGGTCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTATGGCAAGGCGACGTCAAGGAGGCATCTGCTTCCGGCAGCGATGGCGTCCAGTTCGCCTTCACCTCGATGAGGTGGATTGTTACCGTCGGGTGGGCCATTTATCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMGASIVMLVAGFFGESGAWDVFGDMSTEIWWVIGMAGWGYILYALWQGDVKEASASGSDGVQFAFTSMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATCACCGTGCCCCTTCAGGTAGTAGAATTCTACCTCATCATGGCAGCT---------ATC---GGAGCAGCAACCTTC---GCCATG------------------------------------TTCAGGAAC---CTCATGGGAGCATCGATCGTCATGCTAGTAGCCGGATTCTTCGGCGAG---------TCA------------------GGA------GCA---------------------------------TGG------GATGTC------TTCGGA---------GAC---------------------------ATGAGCACC------------------GAGATCTGG---TGGGTCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTA---------------TGG------CAA---GGCGACGTCAAGGAG---GCATCTGCT------TCC---GGCAGCGATGGCGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATTGTTACCGTC---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMGASIVMLVAGFFGE---S------G--A-----------W--DV--FG---D---------MST------EIW-WVIGMAGWGYILYAL-----W--Q-GDVKE-ASA--S-GSDGV-Q-F-A-F-T-SM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ339251 [unk-euryarch-HF70_59C08] clone_S-S80M-A11_DQ339251 gi|85681477|gb|DQ339251| Uncultured bacterium clone S-S80M-A11 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-A11 predicted proteorhodopsin gene, partial cds. DQ339251 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCATCACCGTGCCTCTTCAGGTAGTAGAATTCTACCTCATCATGGCAGCTATCGGAGCAGCAACCTTCGCCATGTTCAGGAACCTCATGGGAGCATCGATCGTCATGCTAGTAGCCGGATTCTTCGGCGAGTCAGGAGCATGGGATGTCTTCGGAGACACGAGCACCGAGATCTGGTGGGTCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTATGGCAAGGCGACGTCAAGGAGGCATCTGCTTCCGGCAGCGATGGCGTCCAGTTCGCCTTCACCTCGATGAGGTGGATTGTTACCGTCGGGTGGGCCATTTATCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMGASIVMLVAGFFGESGAWDVFGDTSTEIWWVIGMAGWGYILYALWQGDVKEASASGSDGVQFAFTSMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATCACCGTGCCTCTTCAGGTAGTAGAATTCTACCTCATCATGGCAGCT---------ATC---GGAGCAGCAACCTTC---GCCATG------------------------------------TTCAGGAAC---CTCATGGGAGCATCGATCGTCATGCTAGTAGCCGGATTCTTCGGCGAG---------TCA------------------GGA------GCA---------------------------------TGG------GATGTC------TTCGGA---------GAC---------------------------ACGAGCACC------------------GAGATCTGG---TGGGTCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTA---------------TGG------CAA---GGCGACGTCAAGGAG---GCATCTGCT------TCC---GGCAGCGATGGCGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATTGTTACCGTC---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMGASIVMLVAGFFGE---S------G--A-----------W--DV--FG---D---------TST------EIW-WVIGMAGWGYILYAL-----W--Q-GDVKE-ASA--S-GSDGV-Q-F-A-F-T-SM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ339284 [unk-euryarch-HF70_59C08] clone_S-S80M-D4_DQ339284 gi|85681543|gb|DQ339284| Uncultured bacterium clone S-S80M-D4 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-D4 predicted proteorhodopsin gene, partial cds. DQ339284 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCATCACCGTGCCTCTTCAGGTAGTAGAATTCTACCTCATCATGGCAGCTATCGGAGCAGCAACCTTCGCCATGTTCAGGAACCTCATGGGAGCATCGATCGTCATGCTAGTAGCCGGATTCTTCGGCGAGTCAGGAGCATGGGATGTCTTCGGAGACATGAGCACCGAGATCTGGTGGGTCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTATGGCAAGGCGACGTCAAGGAGGCATCTGCTTCCGGCAGCGATGGCGTCCAGTTCGCCTTCACCTCGATGAGGTGGATTGTTACCGTCGGGTGGGCCATTTACCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMGASIVMLVAGFFGESGAWDVFGDMSTEIWWVIGMAGWGYILYALWQGDVKEASASGSDGVQFAFTSMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATCACCGTGCCTCTTCAGGTAGTAGAATTCTACCTCATCATGGCAGCT---------ATC---GGAGCAGCAACCTTC---GCCATG------------------------------------TTCAGGAAC---CTCATGGGAGCATCGATCGTCATGCTAGTAGCCGGATTCTTCGGCGAG---------TCA------------------GGA------GCA---------------------------------TGG------GATGTC------TTCGGA---------GAC---------------------------ATGAGCACC------------------GAGATCTGG---TGGGTCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTA---------------TGG------CAA---GGCGACGTCAAGGAG---GCATCTGCT------TCC---GGCAGCGATGGCGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATTGTTACCGTC---------------------------------------------------------------GGGTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMGASIVMLVAGFFGE---S------G--A-----------W--DV--FG---D---------MST------EIW-WVIGMAGWGYILYAL-----W--Q-GDVKE-ASA--S-GSDGV-Q-F-A-F-T-SM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203757 [unk-euryarch-HF70_59C08] SS114a0C6_env_samples_DQ203757 gi|77547962|gb|DQ203757| Uncultured bacterium clone SS114a0C6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0C6 predicted proteorhodopsin gene, partial cds DQ203757 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATACATTGATTGGCTCATCACCGTGCCTCTTCAGGTAGTAGAATTCTACCTCATCATGGCAGCTATCGGAGCAGCAACCTTCGCCATGTTCAGGAACCTCATGGGAGCATCGATCGTCATGCTAGCAGCCGGATTCTTCGGCGAGTCAGGAGCATGGGATGTCTTCGGAGACATGAGCACCGAGATCTGGTGGGTCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTATGGCAAGGCGACGTCAAGGAGGCATCTGCTTCCGGCAGCGATGGCGTCCAGTTCGCCTTCACCTCGATGAGGTGGATTGTTACCGTCGGGTGGGCCATTTACCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMGASIVMLAAGFFGESGAWDVFGDMSTEIWWVIGMAGWGYILYALWQGDVKEASASGSDGVQFAFTSMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATTGATTGG------------------------CTCATCACCGTGCCTCTTCAGGTAGTAGAATTCTACCTCATCATGGCAGCT---------ATC---GGAGCAGCAACCTTC---GCCATG------------------------------------TTCAGGAAC---CTCATGGGAGCATCGATCGTCATGCTAGCAGCCGGATTCTTCGGCGAG---------TCA------------------GGA------GCA---------------------------------TGG------GATGTC------TTCGGA---------GAC---------------------------ATGAGCACC------------------GAGATCTGG---TGGGTCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTA---------------TGG------CAA---GGCGACGTCAAGGAG---GCATCTGCT------TCC---GGCAGCGATGGCGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATTGTTACCGTC---------------------------------------------------------------GGGTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMGASIVMLAAGFFGE---S------G--A-----------W--DV--FG---D---------MST------EIW-WVIGMAGWGYILYAL-----W--Q-GDVKE-ASA--S-GSDGV-Q-F-A-F-T-SM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203811 [unk-euryarch-HF70_59C08] SS114a40C2_env_samples_DQ203811 gi|77548070|gb|DQ203811| Uncultured bacterium clone SS114a40C2 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40C2 predicted proteorhodopsin gene, partial cds DQ203811 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGATTGGCTCATCACCGTGCCTCTTCAGGTAGTAGAATTCTACCTCATCATGGCAGCTATCGGAGCAGCAACCTTCGCCATGTTCAGGAACCTCATGGGAGCATCGATCGTCATGCTAGTAGCCGGATTCTTCGGCGAGTCAGGAGCATGGGATGTCTTCGGAGACATGAGCACCGAGATCTGGTGGGTCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTATGGCAAGGCGACGTCAAGGAGGCATCTGCTTCCGGCAGCGATGGCGTCCAGTTCGCCTTCACCTCGATGAGGTGGATTGTTACCGTCGGGTGGGCCATTTATCCA SYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMGASIVMLVAGFFGESGAWDVFGDMSTEIWWVIGMAGWGYILYALWQGDVKEASASGSDGVQFAFTSMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGATTGG------------------------CTCATCACCGTGCCTCTTCAGGTAGTAGAATTCTACCTCATCATGGCAGCT---------ATC---GGAGCAGCAACCTTC---GCCATG------------------------------------TTCAGGAAC---CTCATGGGAGCATCGATCGTCATGCTAGTAGCCGGATTCTTCGGCGAG---------TCA------------------GGA------GCA---------------------------------TGG------GATGTC------TTCGGA---------GAC---------------------------ATGAGCACC------------------GAGATCTGG---TGGGTCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTA---------------TGG------CAA---GGCGACGTCAAGGAG---GCATCTGCT------TCC---GGCAGCGATGGCGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATTGTTACCGTC---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMGASIVMLVAGFFGE---S------G--A-----------W--DV--FG---D---------MST------EIW-WVIGMAGWGYILYAL-----W--Q-GDVKE-ASA--S-GSDGV-Q-F-A-F-T-SM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203776 [unk-euryarch-HF70_59C08] SS114a0F2_env_samples_DQ203776 gi|77548000|gb|DQ203776| Uncultured bacterium clone SS114a0F2 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0F2 predicted proteorhodopsin gene, partial cds DQ203776 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGACTGGCTCATCACCGTGCCTCTTCAGGTAGTAGAATTCTACCTCATCATGGCAGCTATCGGAGCAGCAACCTTCGCCATGTTCAGGAACCTCATGGGAGCATCGATCGTCATGCTAGTAGCCGGATTCTTCGGCGAGTCAGGAGCATGGGATGTCTTCGGAGACATGAGCACCGAGATCTGGTGGGTCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTATGGCAAGGCGACGTCAAGGAGGCATCTGCTTCCGGCAGCGATGGCGTCCAGTTCGCCTTCACCTCGATGAGGTGGATTGTTACCGTCGGGTGGGCCATATATCCA SYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMGASIVMLVAGFFGESGAWDVFGDMSTEIWWVIGMAGWGYILYALWQGDVKEASASGSDGVQFAFTSMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGACTGG------------------------CTCATCACCGTGCCTCTTCAGGTAGTAGAATTCTACCTCATCATGGCAGCT---------ATC---GGAGCAGCAACCTTC---GCCATG------------------------------------TTCAGGAAC---CTCATGGGAGCATCGATCGTCATGCTAGTAGCCGGATTCTTCGGCGAG---------TCA------------------GGA------GCA---------------------------------TGG------GATGTC------TTCGGA---------GAC---------------------------ATGAGCACC------------------GAGATCTGG---TGGGTCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTA---------------TGG------CAA---GGCGACGTCAAGGAG---GCATCTGCT------TCC---GGCAGCGATGGCGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATTGTTACCGTC---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMGASIVMLVAGFFGE---S------G--A-----------W--DV--FG---D---------MST------EIW-WVIGMAGWGYILYAL-----W--Q-GDVKE-ASA--S-GSDGV-Q-F-A-F-T-SM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203801 [unk-euryarch-HF70_59C08] SS114a40A8_env_samples_DQ203801 gi|77548050|gb|DQ203801| Uncultured bacterium clone SS114a40A8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40A8 predicted proteorhodopsin gene, partial cds DQ203801 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTCATCACCGTGCCTCTTCAGGTAGTAGAATTCTACCTCATCATGGCAGCTATCGGAGCAGCAACCTTCGCCATGTTCAGGAACCTCATGGGAGCATCGATCGTCATGCTAGTAGCCGGATTCTTCGGCGAGTCAGGAGCATGGGATGTCTTCGGAGACATGAGCACCGAGATCTGGTGGGTCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTATGGCAAGGCGACGTCAAGGAGGCATCTGCTTCCGGCAGCGATGGCGTCCAGTTCGCCTTCACCTCGATGAGGTGGATTGTTACCGTCGGGTGGGCAATTTATCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMGASIVMLVAGFFGESGAWDVFGDMSTEIWWVIGMAGWGYILYALWQGDVKEASASGSDGVQFAFTSMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTCATCACCGTGCCTCTTCAGGTAGTAGAATTCTACCTCATCATGGCAGCT---------ATC---GGAGCAGCAACCTTC---GCCATG------------------------------------TTCAGGAAC---CTCATGGGAGCATCGATCGTCATGCTAGTAGCCGGATTCTTCGGCGAG---------TCA------------------GGA------GCA---------------------------------TGG------GATGTC------TTCGGA---------GAC---------------------------ATGAGCACC------------------GAGATCTGG---TGGGTCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTA---------------TGG------CAA---GGCGACGTCAAGGAG---GCATCTGCT------TCC---GGCAGCGATGGCGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATTGTTACCGTC---------------------------------------------------------------GGGTGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMGASIVMLVAGFFGE---S------G--A-----------W--DV--FG---D---------MST------EIW-WVIGMAGWGYILYAL-----W--Q-GDVKE-ASA--S-GSDGV-Q-F-A-F-T-SM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ339283 [unk-euryarch-HF70_59C08] clone_S-S80M-D2_DQ339283 gi|85681541|gb|DQ339283| Uncultured bacterium clone S-S80M-D2 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-D2 predicted proteorhodopsin gene, partial cds. DQ339283 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCATCACCGTGCCTCTTCAGGTAGTAGAATTCTACCTCATCATGGCAGCTATCGGAGCAGCAACCTTCGCCATGTTCAGGAACCTCATGGGAGCATCGATCGTCATGCTAGTAGCCGGATTCTTCGGCGAGTCAGGAGCATGGGATGTCTTCGGAGACATGAGCACCGAGATCTGGTGGGTCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTATGGCAAGGCGACGTCAAGGAGGCATCTGCTTCCGGCAGCGATGGCGTCCAGTTCGCCTTCACCTCGATGAGGTGGATTGTTACCGTCGGGTGGGCAATCTATCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMGASIVMLVAGFFGESGAWDVFGDMSTEIWWVIGMAGWGYILYALWQGDVKEASASGSDGVQFAFTSMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATCACCGTGCCTCTTCAGGTAGTAGAATTCTACCTCATCATGGCAGCT---------ATC---GGAGCAGCAACCTTC---GCCATG------------------------------------TTCAGGAAC---CTCATGGGAGCATCGATCGTCATGCTAGTAGCCGGATTCTTCGGCGAG---------TCA------------------GGA------GCA---------------------------------TGG------GATGTC------TTCGGA---------GAC---------------------------ATGAGCACC------------------GAGATCTGG---TGGGTCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTA---------------TGG------CAA---GGCGACGTCAAGGAG---GCATCTGCT------TCC---GGCAGCGATGGCGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATTGTTACCGTC---------------------------------------------------------------GGGTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMGASIVMLVAGFFGE---S------G--A-----------W--DV--FG---D---------MST------EIW-WVIGMAGWGYILYAL-----W--Q-GDVKE-ASA--S-GSDGV-Q-F-A-F-T-SM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ339311 [unk-euryarch-HF70_59C08] clone_S-S80M-F8_DQ339311 gi|85681595|gb|DQ339311| Uncultured bacterium clone S-S80M-F8 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-F8 predicted proteorhodopsin gene, partial cds. DQ339311 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCATCACCGTGCCTCTTCAGGTAGTAGAATTCTACCTCATCATGGCAGCTATCGGAGCAGCAACCTTCGCCATGTTCAGGAACCTCATGGGAGCATCGATCGTCATGCTAGTAGCCGGATTCTTCGGCGAGTCAGGAGCATGGGATGTCTTCGGAGACATGAGCACCGAGATCTGGTGGGTCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTATGGCAAGGCGACGTCAAGGAGGCATCTGCTTCCGGCAGCGATGGCGTCCAGTTCGCCTTCACCTCGATGAGGTGGATTGTTACCGTCGGGTGGGCAATATATCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMGASIVMLVAGFFGESGAWDVFGDMSTEIWWVIGMAGWGYILYALWQGDVKEASASGSDGVQFAFTSMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATCACCGTGCCTCTTCAGGTAGTAGAATTCTACCTCATCATGGCAGCT---------ATC---GGAGCAGCAACCTTC---GCCATG------------------------------------TTCAGGAAC---CTCATGGGAGCATCGATCGTCATGCTAGTAGCCGGATTCTTCGGCGAG---------TCA------------------GGA------GCA---------------------------------TGG------GATGTC------TTCGGA---------GAC---------------------------ATGAGCACC------------------GAGATCTGG---TGGGTCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTA---------------TGG------CAA---GGCGACGTCAAGGAG---GCATCTGCT------TCC---GGCAGCGATGGCGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATTGTTACCGTC---------------------------------------------------------------GGGTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMGASIVMLVAGFFGE---S------G--A-----------W--DV--FG---D---------MST------EIW-WVIGMAGWGYILYAL-----W--Q-GDVKE-ASA--S-GSDGV-Q-F-A-F-T-SM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203794 [unk-euryarch-HF70_59C08] ss114a401_env_samples_DQ203794 gi|77548036|gb|DQ203794| Uncultured bacterium clone ss114a401 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone ss114a401 predicted proteorhodopsin gene, partial cds DQ203794 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTGATCACCGTGCCTCTTCAGGTAGTAGAATTCTACCTCATCATGGCAGCTATCGGAGCAGCAACCTTCGCCATGTTCAGGAACCTCATGGGAGCATCGATCGTTATGCTAGTAGCCGGATTCTTCGGCGAGTCAGGAGCATGGGATGTCTTCGGAGACCTGAGCACCGAGATCTGGTGGGCCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTATGGCAAGGCGACGTCAAGGAGGCATCTGCTTCCGGCAGCGATGGCGTCCAGTTCGCCTTCACCTCGATGAGGTGGATTGTTACCGTCGGCTGGGCAATCTATCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMGASIVMLVAGFFGESGAWDVFGDLSTEIWWAIGMAGWGYILYALWQGDVKEASASGSDGVQFAFTSMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTGATCACCGTGCCTCTTCAGGTAGTAGAATTCTACCTCATCATGGCAGCT---------ATC---GGAGCAGCAACCTTC---GCCATG------------------------------------TTCAGGAAC---CTCATGGGAGCATCGATCGTTATGCTAGTAGCCGGATTCTTCGGCGAG---------TCA------------------GGA------GCA---------------------------------TGG------GATGTC------TTCGGA---------GAC---------------------------CTGAGCACC------------------GAGATCTGG---TGGGCCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTA---------------TGG------CAA---GGCGACGTCAAGGAG---GCATCTGCT------TCC---GGCAGCGATGGCGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATTGTTACCGTC---------------------------------------------------------------GGCTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMGASIVMLVAGFFGE---S------G--A-----------W--DV--FG---D---------LST------EIW-WAIGMAGWGYILYAL-----W--Q-GDVKE-ASA--S-GSDGV-Q-F-A-F-T-SM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ339319 [unk-euryarch-HF70_59C08] clone_S-S80M-G4_DQ339319 gi|85681611|gb|DQ339319| Uncultured bacterium clone S-S80M-G4 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-G4 predicted proteorhodopsin gene, partial cds. DQ339319 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTCATCACCGTGCCTCTTCAGGTAGTAGAATTCTACCTCATCATGGCAGCTATCGGAGCAGCAACCTTCGCCATGTTCAGGAACCTCATGGGAGCATCGATCGTCATGCTAGTAGCCGGATTCTTCGGCGAGTCAGGAGCATGGGATGTCTTCGGAGACATGAGCACCGAGATCTGGTGGGTCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTATGGCAAGGCGACGTCAAGGAGGCATCTGCTTCCGGCAGCGATGGCGTCCAGTTCGCCTTCACCTCGATGAGGTGGATTGTTACCGTCGGGTGGGCAATCTACCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMGASIVMLVAGFFGESGAWDVFGDMSTEIWWVIGMAGWGYILYALWQGDVKEASASGSDGVQFAFTSMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTCATCACCGTGCCTCTTCAGGTAGTAGAATTCTACCTCATCATGGCAGCT---------ATC---GGAGCAGCAACCTTC---GCCATG------------------------------------TTCAGGAAC---CTCATGGGAGCATCGATCGTCATGCTAGTAGCCGGATTCTTCGGCGAG---------TCA------------------GGA------GCA---------------------------------TGG------GATGTC------TTCGGA---------GAC---------------------------ATGAGCACC------------------GAGATCTGG---TGGGTCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTA---------------TGG------CAA---GGCGACGTCAAGGAG---GCATCTGCT------TCC---GGCAGCGATGGCGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATTGTTACCGTC---------------------------------------------------------------GGGTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMGASIVMLVAGFFGE---S------G--A-----------W--DV--FG---D---------MST------EIW-WVIGMAGWGYILYAL-----W--Q-GDVKE-ASA--S-GSDGV-Q-F-A-F-T-SM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ339301 [unk-euryarch-HF70_59C08] clone_S-S80M-F1_DQ339301 gi|85681575|gb|DQ339301| Uncultured bacterium clone S-S80M-F1 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-F1 predicted proteorhodopsin gene, partial cds. DQ339301 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTCATCACCGTGCCTCTTCAGGTAGTAGAATTCTACCTCATCATGGCAGCTATCGGAGCAGCAACCTTCGCCATGTTCAGGAACCTCATGGGAGCATCGATCGTCATGCTAGTAGCCGGATTCTTCGGCGAGTCAGGAGCATGGGATGTCTTCGGAGACATGAGCACCGAGATCTGGTGGGTCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTATGGCAAGGCGACGTCAAGGAGGCATCTGCTTCCGGCAGCGATGGCGTCCAGTTCGCCTTCACCTCGATGAGGTGGATTGTTACCGTCGGGTGGGCCATCTATCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMGASIVMLVAGFFGESGAWDVFGDMSTEIWWVIGMAGWGYILYALWQGDVKEASASGSDGVQFAFTSMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTCATCACCGTGCCTCTTCAGGTAGTAGAATTCTACCTCATCATGGCAGCT---------ATC---GGAGCAGCAACCTTC---GCCATG------------------------------------TTCAGGAAC---CTCATGGGAGCATCGATCGTCATGCTAGTAGCCGGATTCTTCGGCGAG---------TCA------------------GGA------GCA---------------------------------TGG------GATGTC------TTCGGA---------GAC---------------------------ATGAGCACC------------------GAGATCTGG---TGGGTCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTA---------------TGG------CAA---GGCGACGTCAAGGAG---GCATCTGCT------TCC---GGCAGCGATGGCGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATTGTTACCGTC---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMGASIVMLVAGFFGE---S------G--A-----------W--DV--FG---D---------MST------EIW-WVIGMAGWGYILYAL-----W--Q-GDVKE-ASA--S-GSDGV-Q-F-A-F-T-SM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ339320 [unk-euryarch-HF70_59C08] clone_S-S80M-G5_DQ339320 gi|85681613|gb|DQ339320| Uncultured bacterium clone S-S80M-G5 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-G5 predicted proteorhodopsin gene, partial cds. DQ339320 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTCATCACCGTGCCTCTTCAGGTAGTAGAATTCTACCTCATCATGGCAGCTATCGGAGCAGCAACCTTCGCCATGTTCAGGAACCTCATGGGAGCATCGATCGTCATGCTAGTAGCCGGATTCTTCGGCGAGTCAGGAGCATGGGATGTCTTCGGAGACATGAGCACCGAGATCTGGTGGGTCATCGGTATGGCAGGATGGGGCTACATCCTGTATGCCCTATGGCAAGGCGACGTCAAGGAGGCATCTGCTTCCGGCAGCGATGGCGTCCAGTTCGCCTTCACCTCGATGAGGTGGATTGTTACCGTCGGGTGGGCCATATATCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMGASIVMLVAGFFGESGAWDVFGDMSTEIWWVIGMAGWGYILYALWQGDVKEASASGSDGVQFAFTSMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTCATCACCGTGCCTCTTCAGGTAGTAGAATTCTACCTCATCATGGCAGCT---------ATC---GGAGCAGCAACCTTC---GCCATG------------------------------------TTCAGGAAC---CTCATGGGAGCATCGATCGTCATGCTAGTAGCCGGATTCTTCGGCGAG---------TCA------------------GGA------GCA---------------------------------TGG------GATGTC------TTCGGA---------GAC---------------------------ATGAGCACC------------------GAGATCTGG---TGGGTCATCGGTATGGCAGGATGGGGCTACATCCTGTATGCCCTA---------------TGG------CAA---GGCGACGTCAAGGAG---GCATCTGCT------TCC---GGCAGCGATGGCGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATTGTTACCGTC---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMGASIVMLVAGFFGE---S------G--A-----------W--DV--FG---D---------MST------EIW-WVIGMAGWGYILYAL-----W--Q-GDVKE-ASA--S-GSDGV-Q-F-A-F-T-SM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ339304 [unk-euryarch-HF70_59C08] clone_S-S80M-F12_DQ339304 gi|85681581|gb|DQ339304| Uncultured bacterium clone S-S80M-F12 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-F12 predicted proteorhodopsin gene, partial cds. DQ339304 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCATCACCGTGCCTCTTCAGGTAGTAGAATTCTACCTCATCATGGCAGCTATCGGAGCAGCAACCTTCGCCATGTTCAGGAACCTCATGGGAGCATCGATCGTCATGCTAGTAGCCGGATTCTTCGGCGAGTCAGGAGCATGGGATGTCTTCGGAGACATGAGCACCGAGATCTGGTGGGTCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTATGGCAAGGCGACGTCAAGGAGGCATCTGCTTCCGGCAGCGATGGCGTCCAGTTCGCCTTCACCTCGATGAGGTGGATTGTTACCGTCGGGTGGGCCATATATCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMGASIVMLVAGFFGESGAWDVFGDMSTEIWWVIGMAGWGYILYALWQGDVKEASASGSDGVQFAFTSMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATCACCGTGCCTCTTCAGGTAGTAGAATTCTACCTCATCATGGCAGCT---------ATC---GGAGCAGCAACCTTC---GCCATG------------------------------------TTCAGGAAC---CTCATGGGAGCATCGATCGTCATGCTAGTAGCCGGATTCTTCGGCGAG---------TCA------------------GGA------GCA---------------------------------TGG------GATGTC------TTCGGA---------GAC---------------------------ATGAGCACC------------------GAGATCTGG---TGGGTCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTA---------------TGG------CAA---GGCGACGTCAAGGAG---GCATCTGCT------TCC---GGCAGCGATGGCGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATTGTTACCGTC---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMGASIVMLVAGFFGE---S------G--A-----------W--DV--FG---D---------MST------EIW-WVIGMAGWGYILYAL-----W--Q-GDVKE-ASA--S-GSDGV-Q-F-A-F-T-SM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ339333 [unk-euryarch-HF70_59C08] clone_S-S80M-H9_DQ339333 gi|85681639|gb|DQ339333| Uncultured bacterium clone S-S80M-H9 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-H9 predicted proteorhodopsin gene, partial cds. DQ339333 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCATCACCGTGCCTCTTCAGGTAGTAGAATTCTACCTCATCATGGCAGCTATCGGAGCAGCAACCTTCGCCATGTTCAGGAACCTCATGGGAGCATCGATCGTCATGCTAGTAGCCGGATTCTTCGGCGAGTCAGGAGCATGGGATGTCTTCGGAGACATGAGCACCGAGATCTGGTGGGTCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTATGGCAAGGCGACGTCAAGGAGGCATCTGCTTCCGGCAGCGATGGCGTCCAGTTCGCCTTCACCTCGATGAGGTGGATTGTTACCGTCGGGTGGGCCATCTATCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMGASIVMLVAGFFGESGAWDVFGDMSTEIWWVIGMAGWGYILYALWQGDVKEASASGSDGVQFAFTSMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATCACCGTGCCTCTTCAGGTAGTAGAATTCTACCTCATCATGGCAGCT---------ATC---GGAGCAGCAACCTTC---GCCATG------------------------------------TTCAGGAAC---CTCATGGGAGCATCGATCGTCATGCTAGTAGCCGGATTCTTCGGCGAG---------TCA------------------GGA------GCA---------------------------------TGG------GATGTC------TTCGGA---------GAC---------------------------ATGAGCACC------------------GAGATCTGG---TGGGTCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTA---------------TGG------CAA---GGCGACGTCAAGGAG---GCATCTGCT------TCC---GGCAGCGATGGCGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATTGTTACCGTC---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMGASIVMLVAGFFGE---S------G--A-----------W--DV--FG---D---------MST------EIW-WVIGMAGWGYILYAL-----W--Q-GDVKE-ASA--S-GSDGV-Q-F-A-F-T-SM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ339275 [unk-euryarch-HF70_59C08] clone_S-S80M-C3_DQ339275 gi|85681525|gb|DQ339275| Uncultured bacterium clone S-S80M-C3 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-C3 predicted proteorhodopsin gene, partial cds. DQ339275 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTCATCACCGTGCCTCTTCAGGTAGTAGAATTCTACCTCATCATGGCAGCTATCGGAGCAGCAACCTTCGCCATGTTCAGGAACCTCATGGGAGCATCGATCGTCATGCTAGTAGCCGGATTCTTCGGCGAGTCAGGAGCATGGGATGTCTTCGGAGACATGAGCACCGAGATCTGGTGGGTCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTATGGCAAGGCGACGTCAAGGAGGCATCTGCTTCCGGCAGCGATGGCGTCCAGTTCGCCTTCACCTCGATGAGGTGGATTGTTACCGTCGGGTGGGCAATATATCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMGASIVMLVAGFFGESGAWDVFGDMSTEIWWVIGMAGWGYILYALWQGDVKEASASGSDGVQFAFTSMRWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTCATCACCGTGCCTCTTCAGGTAGTAGAATTCTACCTCATCATGGCAGCT---------ATC---GGAGCAGCAACCTTC---GCCATG------------------------------------TTCAGGAAC---CTCATGGGAGCATCGATCGTCATGCTAGTAGCCGGATTCTTCGGCGAG---------TCA------------------GGA------GCA---------------------------------TGG------GATGTC------TTCGGA---------GAC---------------------------ATGAGCACC------------------GAGATCTGG---TGGGTCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTA---------------TGG------CAA---GGCGACGTCAAGGAG---GCATCTGCT------TCC---GGCAGCGATGGCGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATTGTTACCGTC---------------------------------------------------------------GGGTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMGASIVMLVAGFFGE---S------G--A-----------W--DV--FG---D---------MST------EIW-WVIGMAGWGYILYAL-----W--Q-GDVKE-ASA--S-GSDGV-Q-F-A-F-T-SM-RWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ156375 [unk-euryarch-HF70_59C08] fosmid_HF70_15C09_env_samples_DQ156375 gi|76799956|gb|DQ156375| Uncultured organism clone fosmid HF70 15C09 proteorhodopsin gene, partial cds Uncultured organism clone fosmid HF70 15C09 proteorhodopsin gene, partial cds DQ156375 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 16FEB2006 #na North_Pacific_Subtropical_Gyre_[Hawaii]/70_m_below_sea_surface Pacific Ocean marine 22.75 -158 Proteorhodopsin lateral gene transfer between marine planktonic Bacteria and Archaea Frigaard,N.U., Martinez,A., Mincer,T.J. and DeLong,E.F. Nature 439 (7078), 847850 (2006) 16482157 #na CTGATCACCGTGCCGCTACAGGTAGTAGAGTTCTACCTCATCATGGCAGCAATCGGAGTAGGAACTTTCGCCATGTTCAGGAATCTCATGGGTGCATCGATCGTCATGCTCGTAGCCGGATTCTTCGGCGAGTCAGGAGCATGGGAGCTCTTCGGAGACCTTAGCACCGAGATCTGGTGGGCCATCGGTATGGCAGGATGGGGTTACATCCTGTATGAATTATGGCAAGGCGACGTCAAAGAAGCATCTGCCTCTGGCAGCGATGGCGTTCAGTTCGCCTTCAAAGCGATGAGAGCAATCGTTACCTTC LITVPLQVVEFYLIMAAIGVGTFAMFRNLMGASIVMLVAGFFGESGAWELFGDLSTEIWWAIGMAGWGYILYELWQGDVKEASASGSDGVQFAFKAMRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTGCCGCTACAGGTAGTAGAGTTCTACCTCATCATGGCAGCA---------ATC---GGAGTAGGAACTTTC---GCCATG------------------------------------TTCAGGAAT---CTCATGGGTGCATCGATCGTCATGCTCGTAGCCGGATTCTTCGGCGAG---------TCA------------------GGA------GCA---------------------------------TGG------GAGCTC------TTCGGA---------GAC---------------------------CTTAGCACC------------------GAGATCTGG---TGGGCCATCGGTATGGCAGGATGGGGTTACATCCTGTATGAATTA---------------TGG------CAA---GGCGACGTCAAAGAA---GCATCTGCC------TCT---GGCAGCGATGGCGTT---CAG---TTC---GCC---TTC---AAA---GCGATG---AGAGCAATCGTTACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLIMAA---I-GVGTF-AM------------FRN-LMGASIVMLVAGFFGE---S------G--A-----------W--EL--FG---D---------LST------EIW-WAIGMAGWGYILYEL-----W--Q-GDVKE-ASA--S-GSDGV-Q-F-A-F-K-AM-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ156376 [unk-euryarch-HF70_59C08] fosmid_HF70_19B12_env_samples_DQ156376 gi|76799958|gb|DQ156376| Uncultured organism clone fosmid HF70 19B12 proteorhodopsin gene, partial cds Uncultured organism clone fosmid HF70 19B12 proteorhodopsin gene, partial cds DQ156376 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 16FEB2006 #na North_Pacific_Subtropical_Gyre_[Hawaii]/70_m_below_sea_surface Pacific Ocean marine 22.75 -158 Proteorhodopsin lateral gene transfer between marine planktonic Bacteria and Archaea Frigaard,N.U., Martinez,A., Mincer,T.J. and DeLong,E.F. Nature 439 (7078), 847850 (2006) 16482157 #na CTGATCACCGTGCCGCTACAGGTAGTAGAGTTCTACCTCATCATGGCAGCAATCGGAGTAGGAACTTTCGCCATGTTCAGGAATCTCATGGGTGCATCGATCGTCATGCTCGTAGCCGGATTCTTCGGCGAGTCAGGAGCATGGGAGCTCTTCGGAGACCTTAGCACCGAGATCTGGTGGGCCATCGGTATGGCAGGATGGGGTTACATCCTGTATGAATTATGGCAAGGCGACGTCAAAGAAGCATCTGCCTCTGGCAGCGATGGCGTTCAGTTCGCCTTCAAAGCGATGAGGGCAATCGTTACCTTC LITVPLQVVEFYLIMAAIGVGTFAMFRNLMGASIVMLVAGFFGESGAWELFGDLSTEIWWAIGMAGWGYILYELWQGDVKEASASGSDGVQFAFKAMRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTGCCGCTACAGGTAGTAGAGTTCTACCTCATCATGGCAGCA---------ATC---GGAGTAGGAACTTTC---GCCATG------------------------------------TTCAGGAAT---CTCATGGGTGCATCGATCGTCATGCTCGTAGCCGGATTCTTCGGCGAG---------TCA------------------GGA------GCA---------------------------------TGG------GAGCTC------TTCGGA---------GAC---------------------------CTTAGCACC------------------GAGATCTGG---TGGGCCATCGGTATGGCAGGATGGGGTTACATCCTGTATGAATTA---------------TGG------CAA---GGCGACGTCAAAGAA---GCATCTGCC------TCT---GGCAGCGATGGCGTT---CAG---TTC---GCC---TTC---AAA---GCGATG---AGGGCAATCGTTACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLIMAA---I-GVGTF-AM------------FRN-LMGASIVMLVAGFFGE---S------G--A-----------W--EL--FG---D---------LST------EIW-WAIGMAGWGYILYEL-----W--Q-GDVKE-ASA--S-GSDGV-Q-F-A-F-K-AM-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ156378 [unk-euryarch-HF70_59C08] fosmid_HF70_23H12_env_samples_DQ156378 gi|76799962|gb|DQ156378| Uncultured organism clone fosmid HF70 23H12 proteorhodopsin gene, partial cds Uncultured organism clone fosmid HF70 23H12 proteorhodopsin gene, partial cds DQ156378 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 16FEB2006 #na North_Pacific_Subtropical_Gyre_[Hawaii]/70_m_below_sea_surface Pacific Ocean marine 22.75 -158 Proteorhodopsin lateral gene transfer between marine planktonic Bacteria and Archaea Frigaard,N.U., Martinez,A., Mincer,T.J. and DeLong,E.F. Nature 439 (7078), 847850 (2006) 16482157 #na CTGATCACCGTGCCGCTACAGGTAGTAGAGTTCTACCTCATCATGGCAGCAATCGGAGTAGGAACTTTCGCCATGTTCAGGAATCTCATGGGTGCATCGATCGTCATGCTCGTAGCCGGATTCTTCGGCGAGTCAGGAGCATGGGAGCTCTTCGGAGACCTTAGCACCGAGATCTGGTGGGCCATCGGTATGGCAGGATGGGGTTACATCCTGTATGAATTATGGCAAGGCGACGTCAAAGAAGCATCTGCCTCTGGCAGCGATGGCGTTCAATTCGCCTTCAAAGCGATGAGGGCAATCGTTACCTTC LITVPLQVVEFYLIMAAIGVGTFAMFRNLMGASIVMLVAGFFGESGAWELFGDLSTEIWWAIGMAGWGYILYELWQGDVKEASASGSDGVQFAFKAMRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTGCCGCTACAGGTAGTAGAGTTCTACCTCATCATGGCAGCA---------ATC---GGAGTAGGAACTTTC---GCCATG------------------------------------TTCAGGAAT---CTCATGGGTGCATCGATCGTCATGCTCGTAGCCGGATTCTTCGGCGAG---------TCA------------------GGA------GCA---------------------------------TGG------GAGCTC------TTCGGA---------GAC---------------------------CTTAGCACC------------------GAGATCTGG---TGGGCCATCGGTATGGCAGGATGGGGTTACATCCTGTATGAATTA---------------TGG------CAA---GGCGACGTCAAAGAA---GCATCTGCC------TCT---GGCAGCGATGGCGTT---CAA---TTC---GCC---TTC---AAA---GCGATG---AGGGCAATCGTTACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLIMAA---I-GVGTF-AM------------FRN-LMGASIVMLVAGFFGE---S------G--A-----------W--EL--FG---D---------LST------EIW-WAIGMAGWGYILYEL-----W--Q-GDVKE-ASA--S-GSDGV-Q-F-A-F-K-AM-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ156377 [unk-euryarch-HF70_59C08] fosmid_HF70_23F06_env_samples_DQ156377 gi|76799960|gb|DQ156377| Uncultured organism clone fosmid HF70 23F06 proteorhodopsin gene, partial cds Uncultured organism clone fosmid HF70 23F06 proteorhodopsin gene, partial cds DQ156377 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 16FEB2006 #na North_Pacific_Subtropical_Gyre_[Hawaii]/70_m_below_sea_surface Pacific Ocean marine 22.75 -158 Proteorhodopsin lateral gene transfer between marine planktonic Bacteria and Archaea Frigaard,N.U., Martinez,A., Mincer,T.J. and DeLong,E.F. Nature 439 (7078), 847850 (2006) 16482157 #na CTGATCACCGTGCCGCTACAGGTAGTAGAGTTCTACCTCATCATGGCAGCAATCGGAGTAGGAACTTTCGCCATGTTCAGGAATCTCATGGGTGCATCGATCGTCATGCTCGTAGCCGGATTCTTCGGCGAGTCAGGAGCATGGGAGCTCTTCGGAGACCTTAGCACCGAGATCTGGTGGGCCATCGGTATGGCAGGATGGGGTTACATCCTGTATGAATTATGGCAAGGCGACGTCAAAGAAGCATCTGCCTCTGGCAGCGATGGCGTTCAGTTCGCCTTCAAAGCGATGAGGGCAATCGTTACCTTC LITVPLQVVEFYLIMAAIGVGTFAMFRNLMGASIVMLVAGFFGESGAWELFGDLSTEIWWAIGMAGWGYILYELWQGDVKEASASGSDGVQFAFKAMRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTGCCGCTACAGGTAGTAGAGTTCTACCTCATCATGGCAGCA---------ATC---GGAGTAGGAACTTTC---GCCATG------------------------------------TTCAGGAAT---CTCATGGGTGCATCGATCGTCATGCTCGTAGCCGGATTCTTCGGCGAG---------TCA------------------GGA------GCA---------------------------------TGG------GAGCTC------TTCGGA---------GAC---------------------------CTTAGCACC------------------GAGATCTGG---TGGGCCATCGGTATGGCAGGATGGGGTTACATCCTGTATGAATTA---------------TGG------CAA---GGCGACGTCAAAGAA---GCATCTGCC------TCT---GGCAGCGATGGCGTT---CAG---TTC---GCC---TTC---AAA---GCGATG---AGGGCAATCGTTACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLIMAA---I-GVGTF-AM------------FRN-LMGASIVMLVAGFFGE---S------G--A-----------W--EL--FG---D---------LST------EIW-WAIGMAGWGYILYEL-----W--Q-GDVKE-ASA--S-GSDGV-Q-F-A-F-K-AM-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203327 [unk-euryarch-HF70_59C08] SS114a80E6_env_samples_DQ203327 gi|77547102|gb|DQ203327| Uncultured bacterium clone SS114a80E6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a80E6 predicted proteorhodopsin gene, partial cds DQ203327 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_80m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_2003 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATACATTGACTGGCTGATCACCGTACCGCTACAGGTTGTAGAGTTCTACCTGATTATGGCAGCAATCGGAGCAGCTACCTTCGCTATGTTCAGGAACCTAATGGCAGCATCAATCGTGATGCTCGTAGCTGGTTTCTTCGGCGAGTCAGGAGCATGGGATGTCTTCGGAGACGCAAGCACCGAGATCTGGTGGGTCATCGGAATGGCAGGATGGGGTTACATCCTCTATGCACTCTGGGGAGGCGATGTCAAAGAGGCATCAGAGACCGGCAGCGATGGCGTACAATTTGCATTCACCTCAATGAGGTGGATCGTATCGGTTGGGTGGGCAATATATCCA RYIDWLITVPLQVVEFYLIMAAIGAATFAMFRNLMAASIVMLVAGFFGESGAWDVFGDASTEIWWVIGMAGWGYILYALWGGDVKEASETGSDGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATTGACTGG------------------------CTGATCACCGTACCGCTACAGGTTGTAGAGTTCTACCTGATTATGGCAGCA---------ATC---GGAGCAGCTACCTTC---GCTATG------------------------------------TTCAGGAAC---CTAATGGCAGCATCAATCGTGATGCTCGTAGCTGGTTTCTTCGGCGAG---------TCA------------------GGA------GCA---------------------------------TGG------GATGTC------TTCGGA---------GAC---------------------------GCAAGCACC------------------GAGATCTGG---TGGGTCATCGGAATGGCAGGATGGGGTTACATCCTCTATGCACTC---------------TGG------GGA---GGCGATGTCAAAGAG---GCATCAGAG------ACC---GGCAGCGATGGCGTA---CAA---TTT---GCA---TTC---ACC---TCAATG---AGGTGGATCGTATCGGTT---------------------------------------------------------------GGGTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------W--DV--FG---D---------AST------EIW-WVIGMAGWGYILYAL-----W--G-GDVKE-ASE--T-GSDGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203833 [unk-euryarch-HF70_59C08] SS114a40F12_env_samples_DQ203833 gi|77548114|gb|DQ203833| Uncultured bacterium clone SS114a40F12 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40F12 predicted proteorhodopsin gene, partial cds DQ203833 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATAGACTGGCTAATAACCGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCTATCGGTGTGGGAACTTTCGTCATGTTCAGGAACCTCATGGCCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGAGAGTCCGGAGCAATGGATGGCACACTAGAGCTATCCTCCACAGTTTGGTGGATCATTGGAATGGCAGGATGGTTATACATCCTATACGAGCTATGGTCCGGAGACGTCAAGAAGGCCTCAGAATCTGGTAGCCCAGGAGTCCAGTTCGCCTTCACCTCGATGAGGTGGATCGTATCTGTCGGGTGGGCAATCTACCCA SYIDWLITVPLQVVEFYLILAAIGVGTFVMFRNLMAASIVMLVAGFFGESGAMDGTLELSSTVWWIIGMAGWLYILYELWSGDVKKASESGSPGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATAGACTGG------------------------CTAATAACCGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGTGTGGGAACTTTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGCCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGAGAG---------TCC------------------GGA------GCA---------------------------------ATG------GATGGC------ACACTA---------GAG---------------------------CTATCCTCC------------------ACAGTTTGG---TGGATCATTGGAATGGCAGGATGGTTATACATCCTATACGAGCTA---------------TGG------TCC---GGAGACGTCAAGAAG---GCCTCAGAA------TCT---GGTAGCCCAGGAGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTATCTGTC---------------------------------------------------------------GGGTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------M--DG--TL---E---------LSS------TVW-WIIGMAGWLYILYEL-----W--S-GDVKK-ASE--S-GSPGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203837 [unk-euryarch-HF70_59C08] SS114a40F8_env_samples_DQ203837 gi|77548122|gb|DQ203837| Uncultured bacterium clone SS114a40F8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40F8 predicted proteorhodopsin gene, partial cds DQ203837 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATAGACTGGCTAATAACCGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCTATCGGTGTGGGAACTTTCGTCATGTTCAGGAACCTCATGGCCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGAGAGTCCGGAGCAATGGATGGCACACTAGAGCTATCCTCCACAGTTTGGTGGATCATTGGAATGGCAGGATGGTTATACATCCTATACGAGCTATGGTCCGGAGACGTCAAGAAGGCCTCAGAATCTGGTAGCCCAGGAGTCCAGTTCGCCTTCACCTCGATGAGGTGGATCGTATCTGTCGGGTGGGCAATTTACCCA RYIDWLITVPLQVVEFYLILAAIGVGTFVMFRNLMAASIVMLVAGFFGESGAMDGTLELSSTVWWIIGMAGWLYILYELWSGDVKKASESGSPGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATAACCGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGTGTGGGAACTTTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGCCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGAGAG---------TCC------------------GGA------GCA---------------------------------ATG------GATGGC------ACACTA---------GAG---------------------------CTATCCTCC------------------ACAGTTTGG---TGGATCATTGGAATGGCAGGATGGTTATACATCCTATACGAGCTA---------------TGG------TCC---GGAGACGTCAAGAAG---GCCTCAGAA------TCT---GGTAGCCCAGGAGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTATCTGTC---------------------------------------------------------------GGGTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------M--DG--TL---E---------LSS------TVW-WIIGMAGWLYILYEL-----W--S-GDVKK-ASE--S-GSPGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203808 [unk-euryarch-HF70_59C08] SS114a40B5_env_samples_DQ203808 gi|77548064|gb|DQ203808| Uncultured bacterium clone SS114a40B5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40B5 predicted proteorhodopsin gene, partial cds DQ203808 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTACATCGACTGGCTAATAACCGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCTATCGGTGTGGGAACTTTCGTCATGTTCAGGAACCTCATGGCCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGAGAGTCCGGAGCAATGGATGGCACACTAGAGCTATCCTCCACAGTTTGGTGGATCATTGGAATGGCAGGATGGTTATACATCCTATACGAGCTATGGTCCGGAGACGTCAAGAAGGCCTCAGAATCTGGTAGCCCAGGAGTCCAGTTCGCCTTCACCTCGATGAGGTGGATCGTATCTGTCGGGTGGGCAATTTATCCA RYIDWLITVPLQVVEFYLILAAIGVGTFVMFRNLMAASIVMLVAGFFGESGAMDGTLELSSTVWWIIGMAGWLYILYELWSGDVKKASESGSPGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATCGACTGG------------------------CTAATAACCGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGTGTGGGAACTTTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGCCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGAGAG---------TCC------------------GGA------GCA---------------------------------ATG------GATGGC------ACACTA---------GAG---------------------------CTATCCTCC------------------ACAGTTTGG---TGGATCATTGGAATGGCAGGATGGTTATACATCCTATACGAGCTA---------------TGG------TCC---GGAGACGTCAAGAAG---GCCTCAGAA------TCT---GGTAGCCCAGGAGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTATCTGTC---------------------------------------------------------------GGGTGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------M--DG--TL---E---------LSS------TVW-WIIGMAGWLYILYEL-----W--S-GDVKK-ASE--S-GSPGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203753 [unk-euryarch-HF70_59C08] SS114a0C2_env_samples_DQ203753 gi|77547954|gb|DQ203753| Uncultured bacterium clone SS114a0C2 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0C2 predicted proteorhodopsin gene, partial cds DQ203753 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATCGATTGGCTAATAACCGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCTATCGGTGTGGGAACTTTCGTCATGTTCAGGAACCTCATGGCCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGAGAGTCCGGAGCAATGGATGGCACACTAGAGCTATCCTCCACAGTTTGGTGGATCATTGGAATGGCAGGATGGTTATACATCCTATACGAGCTATGGTCCGGAGACGTCAAGAAGGCCTCAGAATCTGGTAGCCCAGGAGTCCAGTTCGCCTTCACCTCGATGAGGTGGATCGTATCTGTCGGGTGGGCAATTTATCCA RYIDWLITVPLQVVEFYLILAAIGVGTFVMFRNLMAASIVMLVAGFFGESGAMDGTLELSSTVWWIIGMAGWLYILYELWSGDVKKASESGSPGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATCGATTGG------------------------CTAATAACCGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGTGTGGGAACTTTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGCCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGAGAG---------TCC------------------GGA------GCA---------------------------------ATG------GATGGC------ACACTA---------GAG---------------------------CTATCCTCC------------------ACAGTTTGG---TGGATCATTGGAATGGCAGGATGGTTATACATCCTATACGAGCTA---------------TGG------TCC---GGAGACGTCAAGAAG---GCCTCAGAA------TCT---GGTAGCCCAGGAGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTATCTGTC---------------------------------------------------------------GGGTGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------M--DG--TL---E---------LSS------TVW-WIIGMAGWLYILYEL-----W--S-GDVKK-ASE--S-GSPGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203318 [unk-euryarch-HF70_59C08] SS114a80D3_env_samples_DQ203318 gi|77547084|gb|DQ203318| Uncultured bacterium clone SS114a80D3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a80D3 predicted proteorhodopsin gene, partial cds DQ203318 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_80m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_2003 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATCGATTGGCTAATAACCGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCTATCGGTGTGGGAACTTTCGTCATGTTCAGGAACCTCATGGCCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGAGAGTCCGGAGCAATGGATGGCACACTAGAGCTATCCTCCACAGTTTGGTGGATCATTGGAATGGCAGGATGGTTATACATCCTATACGAGCTATGGTCCGGAGACGTCAAGAAGGCCTCAGAATCTGGTAGCCCAGGAGTCCAGTTCGCCTTCACCTCGATGAGGTGGATCGTATCTGTCGGGTGGGCCATTTATCCA SYIDWLITVPLQVVEFYLILAAIGVGTFVMFRNLMAASIVMLVAGFFGESGAMDGTLELSSTVWWIIGMAGWLYILYELWSGDVKKASESGSPGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATCGATTGG------------------------CTAATAACCGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGTGTGGGAACTTTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGCCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGAGAG---------TCC------------------GGA------GCA---------------------------------ATG------GATGGC------ACACTA---------GAG---------------------------CTATCCTCC------------------ACAGTTTGG---TGGATCATTGGAATGGCAGGATGGTTATACATCCTATACGAGCTA---------------TGG------TCC---GGAGACGTCAAGAAG---GCCTCAGAA------TCT---GGTAGCCCAGGAGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTATCTGTC---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------M--DG--TL---E---------LSS------TVW-WIIGMAGWLYILYEL-----W--S-GDVKK-ASE--S-GSPGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203786 [unk-euryarch-HF70_59C08] SS114a0G6_env_samples_DQ203786 gi|77548020|gb|DQ203786| Uncultured bacterium clone SS114a0G6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0G6 predicted proteorhodopsin gene, partial cds DQ203786 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATCGATTGGCTAATAACCGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCTATCGGTGTGGGAACTTTCGTCATGTTCAGGAACCTCATGGCCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGAGAGTCCGGAGCAATGGATGGCACACTAGAGCTATCCTCCACAGTTTGGTGGATCATTGGAATGGCAGGATGGTTATACATCCTATACGAGCTATGGTCCGGAGACGTCAAGAAGGCCTCAGAATCTGGTAGCCCAGGAGTCCAGTTCGCCTTCACCTCGATGAGGTGGATCGTATCTGTCGGGTGGGCCATTTATCCA RYIDWLITVPLQVVEFYLILAAIGVGTFVMFRNLMAASIVMLVAGFFGESGAMDGTLELSSTVWWIIGMAGWLYILYELWSGDVKKASESGSPGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATCGATTGG------------------------CTAATAACCGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGTGTGGGAACTTTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGCCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGAGAG---------TCC------------------GGA------GCA---------------------------------ATG------GATGGC------ACACTA---------GAG---------------------------CTATCCTCC------------------ACAGTTTGG---TGGATCATTGGAATGGCAGGATGGTTATACATCCTATACGAGCTA---------------TGG------TCC---GGAGACGTCAAGAAG---GCCTCAGAA------TCT---GGTAGCCCAGGAGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTATCTGTC---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------M--DG--TL---E---------LSS------TVW-WIIGMAGWLYILYEL-----W--S-GDVKK-ASE--S-GSPGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203739 [unk-euryarch-HF70_59C08] SS114a0A11_env_samples_DQ203739 gi|77547926|gb|DQ203739| Uncultured bacterium clone SS114a0A11 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0A11 predicted proteorhodopsin gene, partial cds DQ203739 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGATTGGCTAATAACCGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCTATCGGTGTGGGAACTTTCGTCATGTTCAGGAACCTCATGGCCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGAGAGTCCGGAGCAATGGATGGCACACTAGAGCTATCCTCCACAGTTTGGTGGATCATTGGAATGGCAGGATGGTTATACATCCTATACGAGCTATGGTCCGGAGACGTCAAGAAGGCCTCAGAATCTGGTAGCCCAGGAGTCCAGTTCGCCTTCACCTCGATGAGGTGGATCGTATCTGTCGGGTGGGCAATAGATCCA SYIDWLITVPLQVVEFYLILAAIGVGTFVMFRNLMAASIVMLVAGFFGESGAMDGTLELSSTVWWIIGMAGWLYILYELWSGDVKKASESGSPGVQFAFTSMRWIVSVGWAIDP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGATTGG------------------------CTAATAACCGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGTGTGGGAACTTTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGCCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGAGAG---------TCC------------------GGA------GCA---------------------------------ATG------GATGGC------ACACTA---------GAG---------------------------CTATCCTCC------------------ACAGTTTGG---TGGATCATTGGAATGGCAGGATGGTTATACATCCTATACGAGCTA---------------TGG------TCC---GGAGACGTCAAGAAG---GCCTCAGAA------TCT---GGTAGCCCAGGAGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTATCTGTC---------------------------------------------------------------GGGTGG---------GCAATAGATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------M--DG--TL---E---------LSS------TVW-WIIGMAGWLYILYEL-----W--S-GDVKK-ASE--S-GSPGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIDP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203810 [unk-euryarch-HF70_59C08] SS114a40C12_env_samples_DQ203810 gi|77548068|gb|DQ203810| Uncultured bacterium clone SS114a40C12 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40C12 predicted proteorhodopsin gene, partial cds DQ203810 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTATATCGATTGGCTAATAACCGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCTATCGGTGTGGGAACTTTCGTCATGTTCAGGAACCTCATGGCCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGAGAGTCCGGAGCAATGGATGGCACACTAGAGCTATCCTCCACAGTTTGGTGGATCATTGGAATGGCAGGATGGTTATACATCCTATACGAGCTATGGTCCGGAGACGTCAAGAAGGCCTCAGAATCTGGTAGCCCAGGAGTCCAGTTCGCCTTCACCTCGATGAGGTGGATCGTATCTGTCGGGTGGGCCATATACCCA RYIDWLITVPLQVVEFYLILAAIGVGTFVMFRNLMAASIVMLVAGFFGESGAMDGTLELSSTVWWIIGMAGWLYILYELWSGDVKKASESGSPGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTATATCGATTGG------------------------CTAATAACCGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGTGTGGGAACTTTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGCCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGAGAG---------TCC------------------GGA------GCA---------------------------------ATG------GATGGC------ACACTA---------GAG---------------------------CTATCCTCC------------------ACAGTTTGG---TGGATCATTGGAATGGCAGGATGGTTATACATCCTATACGAGCTA---------------TGG------TCC---GGAGACGTCAAGAAG---GCCTCAGAA------TCT---GGTAGCCCAGGAGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTATCTGTC---------------------------------------------------------------GGGTGG---------GCCATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------M--DG--TL---E---------LSS------TVW-WIIGMAGWLYILYEL-----W--S-GDVKK-ASE--S-GSPGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203766 [unk-euryarch-HF70_59C08] SS114a0D9_env_samples_DQ203766 gi|77547980|gb|DQ203766| Uncultured bacterium clone SS114a0D9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0D9 predicted proteorhodopsin gene, partial cds DQ203766 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGATTGGCTAATAACCGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCTATCGGTGTGGGAACTTTCGTCATGTTCAGGAACCTCATGGCCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGAGAGTCCGGAGCAATGGATGGCACACTAGAGCTATCCTCCACAGTTTGGTGGATCATTGGAATGGCAGGATGGTTATACATCCTATACGAGCTATGGTCCGGAGACGTCAAGAAGGCCTCAGAATCTGGTAGCCCAGGAGTCCAGTTCGCCTTCGCCTCGATGAGGTGGATCGTATCTGTCGGGTGGGCTATATATCCA SYIDWLITVPLQVVEFYLILAAIGVGTFVMFRNLMAASIVMLVAGFFGESGAMDGTLELSSTVWWIIGMAGWLYILYELWSGDVKKASESGSPGVQFAFASMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGATTGG------------------------CTAATAACCGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGTGTGGGAACTTTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGCCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGAGAG---------TCC------------------GGA------GCA---------------------------------ATG------GATGGC------ACACTA---------GAG---------------------------CTATCCTCC------------------ACAGTTTGG---TGGATCATTGGAATGGCAGGATGGTTATACATCCTATACGAGCTA---------------TGG------TCC---GGAGACGTCAAGAAG---GCCTCAGAA------TCT---GGTAGCCCAGGAGTC---CAG---TTC---GCC---TTC---GCC---TCGATG---AGGTGGATCGTATCTGTC---------------------------------------------------------------GGGTGG---------GCTATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------M--DG--TL---E---------LSS------TVW-WIIGMAGWLYILYEL-----W--S-GDVKK-ASE--S-GSPGV-Q-F-A-F-A-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203756 [unk-euryarch-HF70_59C08] SS114a0C5_env_samples_DQ203756 gi|77547960|gb|DQ203756| Uncultured bacterium clone SS114a0C5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0C5 predicted proteorhodopsin gene, partial cds DQ203756 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGATTGGCTAATAACCGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCTATCGGTGTGGGAACTTTCGTCATGTTCAGGAACCTCATGGCCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGAGAGTCCGGAGCAATGGATGGCACACTAGAGCTATCCTCCACAGTTTGGTGGATCATTGGAATGGCAGGATGGTTATACATCCTATACGAGCTATGGTCCGGAGACGTCAAGAAGGCCTCAGAATCTGGTAGCCCAGGAGTCCAGTTCGCCTTCACCTCGATGAGGTGGATCGTATCTGTCGGGTGGGCCATTTATCCA SYIDWLITVPLQVVEFYLILAAIGVGTFVMFRNLMAASIVMLVAGFFGESGAMDGTLELSSTVWWIIGMAGWLYILYELWSGDVKKASESGSPGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGATTGG------------------------CTAATAACCGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGTGTGGGAACTTTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGCCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGAGAG---------TCC------------------GGA------GCA---------------------------------ATG------GATGGC------ACACTA---------GAG---------------------------CTATCCTCC------------------ACAGTTTGG---TGGATCATTGGAATGGCAGGATGGTTATACATCCTATACGAGCTA---------------TGG------TCC---GGAGACGTCAAGAAG---GCCTCAGAA------TCT---GGTAGCCCAGGAGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTATCTGTC---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------M--DG--TL---E---------LSS------TVW-WIIGMAGWLYILYEL-----W--S-GDVKK-ASE--S-GSPGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203809 [unk-euryarch-HF70_59C08] SS114a40C10_env_samples_DQ203809 gi|77548066|gb|DQ203809| Uncultured bacterium clone SS114a40C10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40C10 predicted proteorhodopsin gene, partial cds DQ203809 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGATTGGCTAATAACCGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCTATCGGTGTGGGAACTTTCGTCATGTTCAGGAACCTCATGGCCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGAGAGTCCGGAGCAATGGATGGCACACTAGAGCTATCCTCCACAGTTTGGTGGATCATTGGAATGGCAGGATGGTTATACATCCTATACGAGCTATGGTCCGGAGACGTCAAGAAGGCCTCAGAATCTGGTAGCCCAGGAGTCCAGTTCGCCTTCACCTCGATGAGGTGGATCGTATCTGTCGGGTGGGCCATTTATCCA SYIDWLITVPLQVVEFYLILAAIGVGTFVMFRNLMAASIVMLVAGFFGESGAMDGTLELSSTVWWIIGMAGWLYILYELWSGDVKKASESGSPGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGATTGG------------------------CTAATAACCGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGTGTGGGAACTTTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGCCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGAGAG---------TCC------------------GGA------GCA---------------------------------ATG------GATGGC------ACACTA---------GAG---------------------------CTATCCTCC------------------ACAGTTTGG---TGGATCATTGGAATGGCAGGATGGTTATACATCCTATACGAGCTA---------------TGG------TCC---GGAGACGTCAAGAAG---GCCTCAGAA------TCT---GGTAGCCCAGGAGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTATCTGTC---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------M--DG--TL---E---------LSS------TVW-WIIGMAGWLYILYEL-----W--S-GDVKK-ASE--S-GSPGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203816 [unk-euryarch-HF70_59C08] SS114a40D10_env_samples_DQ203816 gi|77548080|gb|DQ203816| Uncultured bacterium clone SS114a40D10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40D10 predicted proteorhodopsin gene, partial cds DQ203816 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTACATTGATTGGCTAATAACCGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCTATCGGTGTGGGAACTTTCGTCATGTTCAGGAACCTCATGGCCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGAGAGTCCGGAGCAATGGATGGCACACTAGAGCTATCCTCCACAGTTTGGTGGATCATTGGAATGGCAGGATGGTTATACATCCTATACGAGCTATGGTCCGGAGACGTCAAGAAGGCCTCAGAATCTGGTAGCCCAGGAGTCCAGTTCGCCTTCACCTCGATGAGGTGGATCGTATCTGTCGGGTGGGCCATCTACCCA RYIDWLITVPLQVVEFYLILAAIGVGTFVMFRNLMAASIVMLVAGFFGESGAMDGTLELSSTVWWIIGMAGWLYILYELWSGDVKKASESGSPGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATTGATTGG------------------------CTAATAACCGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGTGTGGGAACTTTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGCCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGAGAG---------TCC------------------GGA------GCA---------------------------------ATG------GATGGC------ACACTA---------GAG---------------------------CTATCCTCC------------------ACAGTTTGG---TGGATCATTGGAATGGCAGGATGGTTATACATCCTATACGAGCTA---------------TGG------TCC---GGAGACGTCAAGAAG---GCCTCAGAA------TCT---GGTAGCCCAGGAGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTATCTGTC---------------------------------------------------------------GGGTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------M--DG--TL---E---------LSS------TVW-WIIGMAGWLYILYEL-----W--S-GDVKK-ASE--S-GSPGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203796 [unk-euryarch-HF70_59C08] ss114a403_env_samples_DQ203796 gi|77548040|gb|DQ203796| Uncultured bacterium clone ss114a403 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone ss114a403 predicted proteorhodopsin gene, partial cds DQ203796 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTACATTGATTGGCTAATAACCGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCTATCGGTGTGGGAACTTTCGTCATGTTCAGGAACCTCATGGCCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGAGAGTCCGGAGCAATGGATGGCACACTAGAGCTACCCTCCACAGTTTGGTGGATCATTGGAATGGCAGGATGGTTATACATCCTATACGAGCTATGGTCCGGAGACGTCAAGAAGGCCTCAGAATCTGGTAGCCCAGGAGTCCAGTTCGCCTTCACCTCGATGAGGTGGATCGTATCTGTCGGGTGGGCAATCTATCCA RYIDWLITVPLQVVEFYLILAAIGVGTFVMFRNLMAASIVMLVAGFFGESGAMDGTLELPSTVWWIIGMAGWLYILYELWSGDVKKASESGSPGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATTGATTGG------------------------CTAATAACCGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGTGTGGGAACTTTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGCCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGAGAG---------TCC------------------GGA------GCA---------------------------------ATG------GATGGC------ACACTA---------GAG---------------------------CTACCCTCC------------------ACAGTTTGG---TGGATCATTGGAATGGCAGGATGGTTATACATCCTATACGAGCTA---------------TGG------TCC---GGAGACGTCAAGAAG---GCCTCAGAA------TCT---GGTAGCCCAGGAGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTATCTGTC---------------------------------------------------------------GGGTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------M--DG--TL---E---------LPS------TVW-WIIGMAGWLYILYEL-----W--S-GDVKK-ASE--S-GSPGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203813 [unk-euryarch-HF70_59C08] SS114a40C7_env_samples_DQ203813 gi|77548074|gb|DQ203813| Uncultured bacterium clone SS114a40C7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40C7 predicted proteorhodopsin gene, partial cds DQ203813 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATAGATTGGCTAATAACCGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCTATCGGTGTGGGAACTTTCGTCATGTTCAGGAACCTCATGGCCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGAGAGTCCGGAGCAATGGATGGCACACTAGAGCTATCCTCCACAGTTTGGTGGATCATTGGAATGGCAGGATGGTTATACATCCTATACGAGCTATGGTCCGGAGACGTCAAGAAGGCCTCAGAATCTGGTAGCCCAGGAGTCCAGTTCGCCTTCACCTCGATGAGGTGGATCGTATCTGTCGGGTGGGCCATCTATCCA SYIDWLITVPLQVVEFYLILAAIGVGTFVMFRNLMAASIVMLVAGFFGESGAMDGTLELSSTVWWIIGMAGWLYILYELWSGDVKKASESGSPGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATAGATTGG------------------------CTAATAACCGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGTGTGGGAACTTTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGCCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGAGAG---------TCC------------------GGA------GCA---------------------------------ATG------GATGGC------ACACTA---------GAG---------------------------CTATCCTCC------------------ACAGTTTGG---TGGATCATTGGAATGGCAGGATGGTTATACATCCTATACGAGCTA---------------TGG------TCC---GGAGACGTCAAGAAG---GCCTCAGAA------TCT---GGTAGCCCAGGAGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTATCTGTC---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------M--DG--TL---E---------LSS------TVW-WIIGMAGWLYILYEL-----W--S-GDVKK-ASE--S-GSPGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203752 [unk-euryarch-HF70_59C08] SS114a0C12_env_samples_DQ203752 gi|77547952|gb|DQ203752| Uncultured bacterium clone SS114a0C12 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0C12 predicted proteorhodopsin gene, partial cds DQ203752 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATAGACTGGCTAATAACCGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCTATCGGTGTGGGAACTTTCGTCATGTTCAGGAACCTCATGGCCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGAGAGTCCGGAGCAATGGATGGCACACTAGAGCTATCCTCCACAGTTTGGTGGATCATTGGAATGGCAGGATGGTTATACATCCTATACGAGCTATGGTCCGGAGACGTCAAGAAGGCCTCAGAATCTGGTAGCCCAGGAGTCCAGTTCGCCTTCACCTCGATGAGGTGGATCGTATCTGTCGGGTGGGCCATATATCCA SYIDWLITVPLQVVEFYLILAAIGVGTFVMFRNLMAASIVMLVAGFFGESGAMDGTLELSSTVWWIIGMAGWLYILYELWSGDVKKASESGSPGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATAGACTGG------------------------CTAATAACCGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGTGTGGGAACTTTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGCCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGAGAG---------TCC------------------GGA------GCA---------------------------------ATG------GATGGC------ACACTA---------GAG---------------------------CTATCCTCC------------------ACAGTTTGG---TGGATCATTGGAATGGCAGGATGGTTATACATCCTATACGAGCTA---------------TGG------TCC---GGAGACGTCAAGAAG---GCCTCAGAA------TCT---GGTAGCCCAGGAGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTATCTGTC---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------M--DG--TL---E---------LSS------TVW-WIIGMAGWLYILYEL-----W--S-GDVKK-ASE--S-GSPGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203748 [unk-euryarch-HF70_59C08] SS114a0B2_env_samples_DQ203748 gi|77547944|gb|DQ203748| Uncultured bacterium clone SS114a0B2 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0B2 predicted proteorhodopsin gene, partial cds DQ203748 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATAGACTGGCTAATAACCGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCTATCGGTGTGGGAACTTTCGTCATGTTCAGGAACCTCATGGCCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGAGAGTCCGGAGCAATGGATGGCACACTAGAGCTATCCTCCACAGTTTGGTGGATCATTGGAATGGCAGGATGGTTATACATCCTATACGAGCTATGGTCCGGAGACGTCAAGAAGGCCTCAAAATCTGGTAGCCCAGGAGTCCAGTTCGCCTTCACCTCGATGAGGTGGATCGTATCTGTCGGGTGGGCCATCTATCCA RYIDWLITVPLQVVEFYLILAAIGVGTFVMFRNLMAASIVMLVAGFFGESGAMDGTLELSSTVWWIIGMAGWLYILYELWSGDVKKASKSGSPGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATAACCGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGTGTGGGAACTTTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGCCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGAGAG---------TCC------------------GGA------GCA---------------------------------ATG------GATGGC------ACACTA---------GAG---------------------------CTATCCTCC------------------ACAGTTTGG---TGGATCATTGGAATGGCAGGATGGTTATACATCCTATACGAGCTA---------------TGG------TCC---GGAGACGTCAAGAAG---GCCTCAAAA------TCT---GGTAGCCCAGGAGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTATCTGTC---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------M--DG--TL---E---------LSS------TVW-WIIGMAGWLYILYEL-----W--S-GDVKK-ASK--S-GSPGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203815 [unk-euryarch-HF70_59C08] SS114a40C9_env_samples_DQ203815 gi|77548078|gb|DQ203815| Uncultured bacterium clone SS114a40C9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40C9 predicted proteorhodopsin gene, partial cds DQ203815 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATAACCGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCTATCGGTGTGGGAACTTTCGTCATGTTCAGGAACCTCATGGCCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGAGAGTCCGGAGCAATGGATGGCACACTAGAGCTATCCTCCACAGTTTGGTGGATCATTGGAATGGCAGGATGGTTATACATCCTATACGAGCTATGGTCCGGAGACGTCAAGAAGGCCTCAGAATCTGGTAGCCCAGGAGTCCAGTTCGCCTTCACCTCGATGAGGTGGATCGTATCTGTCGGGTGGGCCATCTATCCA RYIDWLITVPLQVVEFYLILAAIGVGTFVMFRNLMAASIVMLVAGFFGESGAMDGTLELSSTVWWIIGMAGWLYILYELWSGDVKKASESGSPGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATAACCGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGTGTGGGAACTTTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGCCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGAGAG---------TCC------------------GGA------GCA---------------------------------ATG------GATGGC------ACACTA---------GAG---------------------------CTATCCTCC------------------ACAGTTTGG---TGGATCATTGGAATGGCAGGATGGTTATACATCCTATACGAGCTA---------------TGG------TCC---GGAGACGTCAAGAAG---GCCTCAGAA------TCT---GGTAGCCCAGGAGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTATCTGTC---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------M--DG--TL---E---------LSS------TVW-WIIGMAGWLYILYEL-----W--S-GDVKK-ASE--S-GSPGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203777 [unk-euryarch-HF70_59C08] SS114a0F5_env_samples_DQ203777 gi|77548002|gb|DQ203777| Uncultured bacterium clone SS114a0F5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0F5 predicted proteorhodopsin gene, partial cds DQ203777 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTAATAACCGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCTATCGGTGTGGGAACTTTCGTCATGTTCAGGAACCTCATGGCCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGAGAGTCCGGAGCAATGGATGGCACACTAGAGCTATCCTCCACAGTTTGGTGGATCATTGGAATGGCAGGATGGTTATACATCCTATACGAGCTATGGTCCGGAGACGTCAAGAAGGCCTCAGAATCTGGTAGCCCAGGAGTCCAGTTCGCCTTCACCTCGATGAGGTGGATCGTATCTGTCGGGTGGGCCATCTATCCA RYIDWLITVPLQVVEFYLILAAIGVGTFVMFRNLMAASIVMLVAGFFGESGAMDGTLELSSTVWWIIGMAGWLYILYELWSGDVKKASESGSPGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATAACCGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGTGTGGGAACTTTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGCCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGAGAG---------TCC------------------GGA------GCA---------------------------------ATG------GATGGC------ACACTA---------GAG---------------------------CTATCCTCC------------------ACAGTTTGG---TGGATCATTGGAATGGCAGGATGGTTATACATCCTATACGAGCTA---------------TGG------TCC---GGAGACGTCAAGAAG---GCCTCAGAA------TCT---GGTAGCCCAGGAGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTATCTGTC---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------M--DG--TL---E---------LSS------TVW-WIIGMAGWLYILYEL-----W--S-GDVKK-ASE--S-GSPGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203740 [unk-euryarch-HF70_59C08] SS114a0A12_env_samples_DQ203740 gi|77547928|gb|DQ203740| Uncultured bacterium clone SS114a0A12 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0A12 predicted proteorhodopsin gene, partial cds DQ203740 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTAATAACCGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCTATCGGTGTGGGAACTTTCGTCATGTTCAGGAACCTCATGGCCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGAGAGTCCGGAGCAATGGATGGCACACTAGAGCTATCCTCCACAGTTTGGTGGATCATTGGAATGGCAGGATGGTTATACATCCTATACGAGCTATGGTCCGGAGACGTCAAGAAGGCCTCAGAATCTGGTAGCCCAGGAGTCCAGTTCGCCTTCACCTCGATGAGGTGGATCGTATCTGTCGGGTGGGCAATCTATCCA RYIDWLITVPLQVVEFYLILAAIGVGTFVMFRNLMAASIVMLVAGFFGESGAMDGTLELSSTVWWIIGMAGWLYILYELWSGDVKKASESGSPGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATAACCGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGTGTGGGAACTTTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGCCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGAGAG---------TCC------------------GGA------GCA---------------------------------ATG------GATGGC------ACACTA---------GAG---------------------------CTATCCTCC------------------ACAGTTTGG---TGGATCATTGGAATGGCAGGATGGTTATACATCCTATACGAGCTA---------------TGG------TCC---GGAGACGTCAAGAAG---GCCTCAGAA------TCT---GGTAGCCCAGGAGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTATCTGTC---------------------------------------------------------------GGGTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------M--DG--TL---E---------LSS------TVW-WIIGMAGWLYILYEL-----W--S-GDVKK-ASE--S-GSPGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203789 [unk-euryarch-HF70_59C08] SS114a0H2_env_samples_DQ203789 gi|77548026|gb|DQ203789| Uncultured bacterium clone SS114a0H2 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0H2 predicted proteorhodopsin gene, partial cds DQ203789 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATACATTGACTGGCTAATAACCGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCTATCGGTGTGGGAACTTTCGTCATGTTCAGGAACCTCATGGCCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGAGAGTCCGGAGCAATGGATGGCACACTAGAGCTATCCTCCACAGTTTGGTGGATCATTGGAATGGCAGGATGGTTATACATCCTATACGAGCTATGGTCCGGAGACGTCAAGAAGGCCTCAGAATCTGGTAGCCCAGGAGTCCAGTTCGCCTTCACCTCGATGAGGTGGATCGTATCTGTCGGCTGGGCAATTTATCCA RYIDWLITVPLQVVEFYLILAAIGVGTFVMFRNLMAASIVMLVAGFFGESGAMDGTLELSSTVWWIIGMAGWLYILYELWSGDVKKASESGSPGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATTGACTGG------------------------CTAATAACCGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGTGTGGGAACTTTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGCCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGAGAG---------TCC------------------GGA------GCA---------------------------------ATG------GATGGC------ACACTA---------GAG---------------------------CTATCCTCC------------------ACAGTTTGG---TGGATCATTGGAATGGCAGGATGGTTATACATCCTATACGAGCTA---------------TGG------TCC---GGAGACGTCAAGAAG---GCCTCAGAA------TCT---GGTAGCCCAGGAGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTATCTGTC---------------------------------------------------------------GGCTGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------M--DG--TL---E---------LSS------TVW-WIIGMAGWLYILYEL-----W--S-GDVKK-ASE--S-GSPGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203849 [unk-euryarch-HF70_59C08] SS114a40H3_env_samples_DQ203849 gi|77548146|gb|DQ203849| Uncultured bacterium clone SS114a40H3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40H3 predicted proteorhodopsin gene, partial cds DQ203849 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGCTATATTGACTGGCTAATAACCGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCTATCGGTGTGGGAACTTTCGTCATGTTCAGGAACCTCATGGCCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGAGAGTCCGGAGCAATGGATGGCACACTAGAGCTATCCTCCACAGTTTGGTGGATCATTGGAATGGCAGGATGGTTATACATCCTATACGAGCTATGGTCCGGAGACGTCAAGAAGGCCTCAGAATCTGGTAGCCCAGGAGTCCAGTTCGCCTTCACCTCGATGAGGTGGATCGTATCTGTCGGGTGGGCCATTTATCCA RYIDWLITVPLQVVEFYLILAAIGVGTFVMFRNLMAASIVMLVAGFFGESGAMDGTLELSSTVWWIIGMAGWLYILYELWSGDVKKASESGSPGVQFAFTSMRWIVSVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTATATTGACTGG------------------------CTAATAACCGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGTGTGGGAACTTTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGCCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGAGAG---------TCC------------------GGA------GCA---------------------------------ATG------GATGGC------ACACTA---------GAG---------------------------CTATCCTCC------------------ACAGTTTGG---TGGATCATTGGAATGGCAGGATGGTTATACATCCTATACGAGCTA---------------TGG------TCC---GGAGACGTCAAGAAG---GCCTCAGAA------TCT---GGTAGCCCAGGAGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTATCTGTC---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------M--DG--TL---E---------LSS------TVW-WIIGMAGWLYILYEL-----W--S-GDVKK-ASE--S-GSPGV-Q-F-A-F-T-SM-RWIVSV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ926160 [unk-euryarch-HF70_59C08] BOUM_OTU073_env_samples gb|KJ926160| Uncultured bacterium clone BOUM OTU073 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU073 putative proteorhodopsin gene, partial cds KJ926160 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 39.0995 5.3403333 #na #na #na #na #na GTTGACTGGCTCATAACAGTCCCTCTGCAGGTAGTAGAGTTCTACCTAATCCTCGCCGCTATCGGTGTGGGAACTTTCGTCATGTTCAGGAACCTCATGGTCGCATCCTTAGTCATGCTAGTAGCAGGATTCTTCGGAGAGTCCGGAGCTATGGACGGGACTGCTCTCGAGTTCTCAGCAGAAATCTGGTGGGTCATTGGAATGGCAGGATGGGGATACATCCTATACGAGCTATGGCAAGGTGACGTCAAGGAGGCATCTGCTTCTGGTAGCGATGGCGTCCAGTTCGCCTTCACCTCGATGAGGTGGATTGTTACCGTCGGCTGGGCTATATAT VDWLITVPLQVVEFYLILAAIGVGTFVMFRNLMVASLVMLVAGFFGESGAMDGTALEFSAEIWWVIGMAGWGYILYELWQGDVKEASASGSDGVQFAFTSMRWIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGACTGG------------------------CTCATAACAGTCCCTCTGCAGGTAGTAGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGTGTGGGAACTTTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGTCGCATCCTTAGTCATGCTAGTAGCAGGATTCTTCGGAGAG---------TCC------------------GGA------GCT---------------------------------ATG------GACGGGACT---GCTCTC---------GAG---------------------------TTCTCAGCA------------------GAAATCTGG---TGGGTCATTGGAATGGCAGGATGGGGATACATCCTATACGAGCTA---------------TGG------CAA---GGTGACGTCAAGGAG---GCATCTGCT------TCT---GGTAGCGATGGCGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATTGTTACCGTC---------------------------------------------------------------GGCTGG---------GCTATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMVASLVMLVAGFFGE---S------G--A-----------M--DGT-AL---E---------FSA------EIW-WVIGMAGWGYILYEL-----W--Q-GDVKE-ASA--S-GSDGV-Q-F-A-F-T-SM-RWIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ926162 [unk-euryarch-HF70_59C08] BOUM_OTU075_env_samples gb|KJ926162| Uncultured bacterium clone BOUM OTU075 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU075 putative proteorhodopsin gene, partial cds KJ926162 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 38.6308 7.9097 #na #na #na #na #na GTAGACTGGCTAGTCACAGTACCACTTCAGGTCGTTGAGTTCTACCTAATCCTCGCCGCTATCGGCGTCGGTACCTTCGTGATGTTCAGGAACCTCATGGGTGCATCCATCGTCATGCTAGTGGCTGGATTCTTCGGCGAGTCCGGAGCTATGGATGGTACGCTCGAGCTCAGCTCGACCGTTTGGTGGTTCATCGGAATGCTTGGTTGGGGATACATCCTCTACGAGCTATGGTCCGGGGACGTCAAGGAGGCTGCAGCATCTGGCAGCCCGGGAGTGCAGTTCGCATTCGAATCAATGAGGATGATAGTTACCTTTGGATGGGCGATATAC VDWLVTVPLQVVEFYLILAAIGVGTFVMFRNLMGASIVMLVAGFFGESGAMDGTLELSSTVWWFIGMLGWGYILYELWSGDVKEAAASGSPGVQFAFESMRMIVTFGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGACTGG------------------------CTAGTCACAGTACCACTTCAGGTCGTTGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGCGTCGGTACCTTC---GTGATG------------------------------------TTCAGGAAC---CTCATGGGTGCATCCATCGTCATGCTAGTGGCTGGATTCTTCGGCGAG---------TCC------------------GGA------GCT---------------------------------ATG------GATGGT------ACGCTC---------GAG---------------------------CTCAGCTCG------------------ACCGTTTGG---TGGTTCATCGGAATGCTTGGTTGGGGATACATCCTCTACGAGCTA---------------TGG------TCC---GGGGACGTCAAGGAG---GCTGCAGCA------TCT---GGCAGCCCGGGAGTG---CAG---TTC---GCA---TTC---GAA---TCAATG---AGGATGATAGTTACCTTT---------------------------------------------------------------GGATGG---------GCGATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LVTVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMGASIVMLVAGFFGE---S------G--A-----------M--DG--TL---E---------LSS------TVW-WFIGMLGWGYILYEL-----W--S-GDVKE-AAA--S-GSPGV-Q-F-A-F-E-SM-RMIVTF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ926161 [unk-euryarch-HF70_59C08] BOUM_OTU074_env_samples gb|KJ926161| Uncultured bacterium clone BOUM OTU074 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU074 putative proteorhodopsin gene, partial cds KJ926161 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 38.6308 7.9097 #na #na #na #na #na GTAGACTGGCTGATAACAGTCCCTCTACAAGTAGTAGAGTTCTACCTAATCCTCGCCGCTATCGGTGTAGGAACTTTCGTCATGTTCAGGAACCTCATGGTTGCATCGATAGTCATGCTAGTAGCAGGATTCTTCGGAGAGTCCGGAGCTATGGACGGCACCACACTCGAGCTCAGCGCCACCGTTTGGTGGGTCATCGGAATGCTTGGATGGGGATACATCCTATACGAGCTATGGTCCGGAGACGTCAAGGAGGCCTCAGAATCTGGCAGCCCAGGAGTCCAGTACGCATTCAACGCAATGAGGATGATTGTTACTGTAGGCTGGGCCATATAC VDWLITVPLQVVEFYLILAAIGVGTFVMFRNLMVASIVMLVAGFFGESGAMDGTTLELSATVWWVIGMLGWGYILYELWSGDVKEASESGSPGVQYAFNAMRMIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGACTGG------------------------CTGATAACAGTCCCTCTACAAGTAGTAGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGTGTAGGAACTTTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGTTGCATCGATAGTCATGCTAGTAGCAGGATTCTTCGGAGAG---------TCC------------------GGA------GCT---------------------------------ATG------GACGGCACC---ACACTC---------GAG---------------------------CTCAGCGCC------------------ACCGTTTGG---TGGGTCATCGGAATGCTTGGATGGGGATACATCCTATACGAGCTA---------------TGG------TCC---GGAGACGTCAAGGAG---GCCTCAGAA------TCT---GGCAGCCCAGGAGTC---CAG---TAC---GCA---TTC---AAC---GCAATG---AGGATGATTGTTACTGTA---------------------------------------------------------------GGCTGG---------GCCATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMVASIVMLVAGFFGE---S------G--A-----------M--DGT-TL---E---------LSA------TVW-WVIGMLGWGYILYEL-----W--S-GDVKE-ASE--S-GSPGV-Q-Y-A-F-N-AM-RMIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ422435 [unk-euryarch-HF70_59C08] clone_med-50m-g9_DQ422435 gi|90024390|gb|DQ422435| Uncultured bacterium clone med-50m-g9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-g9 putative proteorhodopsin gene, partial cds. DQ422435 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATAACAGTCCCTCTACAAGTAGTAGAGTTCTACCTAATCCTCGCCGCTATCGGTGTAGGAACTTTCGTCATGTTCAGGAACCTCATGGTTGCATCGATAGTCATGCTAGTAGCAGGATTCTTCGGAGAGTCCGGAGCTATGGACGGCACACTCGAGCTCAGCGCCACCGTTTGGTGGGTCATCGGAATGCTTGGATGGGGATACATCCTATACGAGCTATGGTCCGGAGACGTCAAGGAGGCCTCAGAATCTGGCAGCCCAGGAGTCCAGTACGCATTCAACGCAATGAGGATGATTGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQVVEFYLILAAIGVGTFVMFRNLMVASIVMLVAGFFGESGAMDGTLELSATVWWVIGMLGWGYILYELWSGDVKEASESGSPGVQYAFNAMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATAACAGTCCCTCTACAAGTAGTAGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGTGTAGGAACTTTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGTTGCATCGATAGTCATGCTAGTAGCAGGATTCTTCGGAGAG---------TCC------------------GGA------GCT---------------------------------ATG------GACGGC------ACACTC---------GAG---------------------------CTCAGCGCC------------------ACCGTTTGG---TGGGTCATCGGAATGCTTGGATGGGGATACATCCTATACGAGCTA---------------TGG------TCC---GGAGACGTCAAGGAG---GCCTCAGAA------TCT---GGCAGCCCAGGAGTC---CAG---TAC---GCA---TTC---AAC---GCAATG---AGGATGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMVASIVMLVAGFFGE---S------G--A-----------M--DG--TL---E---------LSA------TVW-WVIGMLGWGYILYEL-----W--S-GDVKE-ASE--S-GSPGV-Q-Y-A-F-N-AM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203846 [unk-euryarch-HF70_59C08] SS114a40H1_env_samples_DQ203846 gi|77548140|gb|DQ203846| Uncultured bacterium clone SS114a40H1 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40H1 predicted proteorhodopsin gene, partial cds DQ203846 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTACATAGACTGGCTAATCACAGTACCACTGCAAGTCGTTGAGTTCTACCTAATCCTCGCCGCTATCGGTGTGGGAACTTTCGCCATGTTCAGAAACCTCATGGGAGCATCCATCGTCATGCTAGTGGCTGGATTCTTCGGTGAGTCCGGAGCTATGGACAGTACAATCGATCTATCCGCTGAGATCTGGTGGGTCATCGGAATGGCTGGATGGGGATACATCCTATACGAGCTATGGTCCGGAGATGTCAAAGAGGCTTCAGAGACTGGTAGCCCAAGCGTTCAGTACGCATTCAACTCAATGAGGATGATTGTAACTGTAGGGTGGGCAATATATCCA RYIDWLITVPLQVVEFYLILAAIGVGTFAMFRNLMGASIVMLVAGFFGESGAMDSTIDLSAEIWWVIGMAGWGYILYELWSGDVKEASETGSPSVQYAFNSMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATAGACTGG------------------------CTAATCACAGTACCACTGCAAGTCGTTGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGTGTGGGAACTTTC---GCCATG------------------------------------TTCAGAAAC---CTCATGGGAGCATCCATCGTCATGCTAGTGGCTGGATTCTTCGGTGAG---------TCC------------------GGA------GCT---------------------------------ATG------GACAGT------ACAATC---------GAT---------------------------CTATCCGCT------------------GAGATCTGG---TGGGTCATCGGAATGGCTGGATGGGGATACATCCTATACGAGCTA---------------TGG------TCC---GGAGATGTCAAAGAG---GCTTCAGAG------ACT---GGTAGCCCAAGCGTT---CAG---TAC---GCA---TTC---AAC---TCAATG---AGGATGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLILAA---I-GVGTF-AM------------FRN-LMGASIVMLVAGFFGE---S------G--A-----------M--DS--TI---D---------LSA------EIW-WVIGMAGWGYILYEL-----W--S-GDVKE-ASE--T-GSPSV-Q-Y-A-F-N-SM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203735 [unk-euryarch-HF70_59C08] ss114a01_env_samples_DQ203735 gi|77547918|gb|DQ203735| Uncultured bacterium clone ss114a01 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone ss114a01 predicted proteorhodopsin gene, partial cds DQ203735 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTACATTGACTGGCTAATCACAGTACCACTGCAAGTCGTTGAGTTCTACCTAATCCTCGCCGCTATCGGTGTGGGAACTTTCGCCATGTTCAGAAACCTCATGGGAGCATCCATCGTCATGCTAGTGGCTGGATTCTTCGGTGAGTCCGGAGCTATGGACAGTACAATCGATCTATCCGCTGAGATCTGGTGGGTCATCGGAATGGCTGGATGGGGATACATCCTATACGAGCTATGGTCCGGAGATGTCAAAGAGGCTTCAGAGACTGGTAGCCCAAGCGTTCAGTACGCATTCAACTCAATGAGGATGATTGTAACTGTAGGGTGGGCCATATATCCA RYIDWLITVPLQVVEFYLILAAIGVGTFAMFRNLMGASIVMLVAGFFGESGAMDSTIDLSAEIWWVIGMAGWGYILYELWSGDVKEASETGSPSVQYAFNSMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATTGACTGG------------------------CTAATCACAGTACCACTGCAAGTCGTTGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGTGTGGGAACTTTC---GCCATG------------------------------------TTCAGAAAC---CTCATGGGAGCATCCATCGTCATGCTAGTGGCTGGATTCTTCGGTGAG---------TCC------------------GGA------GCT---------------------------------ATG------GACAGT------ACAATC---------GAT---------------------------CTATCCGCT------------------GAGATCTGG---TGGGTCATCGGAATGGCTGGATGGGGATACATCCTATACGAGCTA---------------TGG------TCC---GGAGATGTCAAAGAG---GCTTCAGAG------ACT---GGTAGCCCAAGCGTT---CAG---TAC---GCA---TTC---AAC---TCAATG---AGGATGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLILAA---I-GVGTF-AM------------FRN-LMGASIVMLVAGFFGE---S------G--A-----------M--DS--TI---D---------LSA------EIW-WVIGMAGWGYILYEL-----W--S-GDVKE-ASE--T-GSPSV-Q-Y-A-F-N-SM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203315 [unk-euryarch-HF70_59C08] SS114a80C8_env_samples_DQ203315 gi|77547078|gb|DQ203315| Uncultured bacterium clone SS114a80C8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a80C8 predicted proteorhodopsin gene, partial cds DQ203315 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_80m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_2003 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATCACAGTACCACTGCAAGTCGTTGAGTTCTACCTAATCCTCGCCGCTATCGGTGTGGGAACTTTCGCCATGTTCAGAAACCTCATGGGAGCATCCATCGTCATGCTAGTGGCTGGATTCTTCGGTGAGTCCGGAGCTATGGACAGTACAATCGATCTATCCGCTGAGATCTGGTGGGTCATCGGAATGGCTGGATGGGGATACATCCTATACGAGCTATGGTCCGGAGATGTCAAAGAGGCTTCAGAGACTGGTAGCCCAAGCGTTCAGTACGCATTCAACTCAATGAGGATGATTGTAACTGTAGGGTGGGCCATCTATCCA RYIDWLITVPLQVVEFYLILAAIGVGTFAMFRNLMGASIVMLVAGFFGESGAMDSTIDLSAEIWWVIGMAGWGYILYELWSGDVKEASETGSPSVQYAFNSMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATCACAGTACCACTGCAAGTCGTTGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGTGTGGGAACTTTC---GCCATG------------------------------------TTCAGAAAC---CTCATGGGAGCATCCATCGTCATGCTAGTGGCTGGATTCTTCGGTGAG---------TCC------------------GGA------GCT---------------------------------ATG------GACAGT------ACAATC---------GAT---------------------------CTATCCGCT------------------GAGATCTGG---TGGGTCATCGGAATGGCTGGATGGGGATACATCCTATACGAGCTA---------------TGG------TCC---GGAGATGTCAAAGAG---GCTTCAGAG------ACT---GGTAGCCCAAGCGTT---CAG---TAC---GCA---TTC---AAC---TCAATG---AGGATGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLILAA---I-GVGTF-AM------------FRN-LMGASIVMLVAGFFGE---S------G--A-----------M--DS--TI---D---------LSA------EIW-WVIGMAGWGYILYEL-----W--S-GDVKE-ASE--T-GSPSV-Q-Y-A-F-N-SM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203783 [unk-euryarch-HF70_59C08] SS114a0G11_env_samples_DQ203783 gi|77548014|gb|DQ203783| Uncultured bacterium clone SS114a0G11 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0G11 predicted proteorhodopsin gene, partial cds DQ203783 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATACATTGACTGGCTAATCACAGTACCACTGCAAGTCGTTGAGTTCTACCTAATCCTCGCCGCTATCGGTGTGGGAACTTTCGCCATGTTCAGAAACCTCATGGGAGCATCCATCGTCATGCTAGTGGCTGGATTCTTCGGTGAGTCCGGAGCTATGGACAGTACAATCGATCTATCCGCTGAGATCTGGTGGGTCATCGGAATGGCTGGATGGGGATACATCCTATACGAGCTATGGTCCGGAGATGTCAAAGAGGCTTCAGAGACTGGTAGCCCAAGCGTTCAGTACGCATTCAACTCAATGAGGATGATTGTAACTGTAGGGTGGGCAATCTACCCA RYIDWLITVPLQVVEFYLILAAIGVGTFAMFRNLMGASIVMLVAGFFGESGAMDSTIDLSAEIWWVIGMAGWGYILYELWSGDVKEASETGSPSVQYAFNSMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATTGACTGG------------------------CTAATCACAGTACCACTGCAAGTCGTTGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGTGTGGGAACTTTC---GCCATG------------------------------------TTCAGAAAC---CTCATGGGAGCATCCATCGTCATGCTAGTGGCTGGATTCTTCGGTGAG---------TCC------------------GGA------GCT---------------------------------ATG------GACAGT------ACAATC---------GAT---------------------------CTATCCGCT------------------GAGATCTGG---TGGGTCATCGGAATGGCTGGATGGGGATACATCCTATACGAGCTA---------------TGG------TCC---GGAGATGTCAAAGAG---GCTTCAGAG------ACT---GGTAGCCCAAGCGTT---CAG---TAC---GCA---TTC---AAC---TCAATG---AGGATGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLILAA---I-GVGTF-AM------------FRN-LMGASIVMLVAGFFGE---S------G--A-----------M--DS--TI---D---------LSA------EIW-WVIGMAGWGYILYEL-----W--S-GDVKE-ASE--T-GSPSV-Q-Y-A-F-N-SM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203322 [unk-euryarch-HF70_59C08] SS114a80E11_env_samples_DQ203322 gi|77547092|gb|DQ203322| Uncultured bacterium clone SS114a80E11 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a80E11 predicted proteorhodopsin gene, partial cds DQ203322 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_80m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_2003 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGCTACATAGATTGGCTAATCACAGTACCACTGCAAGTCGTTGAGTTCTACCTAATCCTCGCCGCTATCGGTGTGGGAACTTTCGCCATGTTCAGAAACCTCATGGGAGCATCCATCGTCATGCTAGTGGCTGGATTCTTCGGTGAGTCCGGAGCTATGGACAGTACAATCGATCTATCCGCTGAGATCTGGTGGGTCATCGGAATGGCTGGATGGGGATACATCCTATACGAGCCATGGTCCGGAGATGTCAAAGAGGCTTCAGAGACTGGTAGCCCAAGCGTTCAGTACGCATTCAACTCAATGAGGATGATTGTAACTGTAGGCTGGGCCATTTATCCA RYIDWLITVPLQVVEFYLILAAIGVGTFAMFRNLMGASIVMLVAGFFGESGAMDSTIDLSAEIWWVIGMAGWGYILYEPWSGDVKEASETGSPSVQYAFNSMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTACATAGATTGG------------------------CTAATCACAGTACCACTGCAAGTCGTTGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGTGTGGGAACTTTC---GCCATG------------------------------------TTCAGAAAC---CTCATGGGAGCATCCATCGTCATGCTAGTGGCTGGATTCTTCGGTGAG---------TCC------------------GGA------GCT---------------------------------ATG------GACAGT------ACAATC---------GAT---------------------------CTATCCGCT------------------GAGATCTGG---TGGGTCATCGGAATGGCTGGATGGGGATACATCCTATACGAGCCA---------------TGG------TCC---GGAGATGTCAAAGAG---GCTTCAGAG------ACT---GGTAGCCCAAGCGTT---CAG---TAC---GCA---TTC---AAC---TCAATG---AGGATGATTGTAACTGTA---------------------------------------------------------------GGCTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLILAA---I-GVGTF-AM------------FRN-LMGASIVMLVAGFFGE---S------G--A-----------M--DS--TI---D---------LSA------EIW-WVIGMAGWGYILYEP-----W--S-GDVKE-ASE--T-GSPSV-Q-Y-A-F-N-SM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203775 [unk-euryarch-HF70_59C08] SS114a0F11_env_samples_DQ203775 gi|77547998|gb|DQ203775| Uncultured bacterium clone SS114a0F11 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0F11 predicted proteorhodopsin gene, partial cds DQ203775 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGACTGGCTAATCACAGTACCACTGCAAGTCGTTGAGTTCTACCTAATCCTCGCCGCTATCGGTGTGGGAACTTTCGCCATGTTCAGAAACCTCATGGGAGCATCCATCGTCATGCTAGTGGCTGGATTCTTCGGTGAGTCCGGAGCTATGGACAGTACAATCGATCTATCCGCTGAGATCTGGTGGGTCATCGGAATGGCTGGATGGGGATACATCCTATACGAGCTATGGTCCGGAGATGTCAAAGAGGCTTCAGAGACTGGTAGCCCAAGCGTTCAGTACGCATTCAACTCAATGAGGATGATTGTAACTGTAGGGTGGGCCATCTATCCA SYIDWLITVPLQVVEFYLILAAIGVGTFAMFRNLMGASIVMLVAGFFGESGAMDSTIDLSAEIWWVIGMAGWGYILYELWSGDVKEASETGSPSVQYAFNSMRMIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGACTGG------------------------CTAATCACAGTACCACTGCAAGTCGTTGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGTGTGGGAACTTTC---GCCATG------------------------------------TTCAGAAAC---CTCATGGGAGCATCCATCGTCATGCTAGTGGCTGGATTCTTCGGTGAG---------TCC------------------GGA------GCT---------------------------------ATG------GACAGT------ACAATC---------GAT---------------------------CTATCCGCT------------------GAGATCTGG---TGGGTCATCGGAATGGCTGGATGGGGATACATCCTATACGAGCTA---------------TGG------TCC---GGAGATGTCAAAGAG---GCTTCAGAG------ACT---GGTAGCCCAAGCGTT---CAG---TAC---GCA---TTC---AAC---TCAATG---AGGATGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQVVEFYLILAA---I-GVGTF-AM------------FRN-LMGASIVMLVAGFFGE---S------G--A-----------M--DS--TI---D---------LSA------EIW-WVIGMAGWGYILYEL-----W--S-GDVKE-ASE--T-GSPSV-Q-Y-A-F-N-SM-RMIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203754 [unk-euryarch-HF70_59C08] SS114a0C3_env_samples_DQ203754 gi|77547956|gb|DQ203754| Uncultured bacterium clone SS114a0C3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0C3 predicted proteorhodopsin gene, partial cds DQ203754 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATCACAGTCCCACTGCAGGTCGTTGAATTCTACCTAATCCTCGCCGCTATCGGTGTGGGAACATTCGTCATGTTCAGGAACCTCATGGCAGCATCCATCGTCATGCTAGTGGCTGGATTCTTCGGTGAGTCCGGAGCAATGGACAACGTCATCGACCTGTCCGCTGAGATCTGGTGGGTCATTGGAATGGCAGGATGGGGATACATCCTGTATGAGCTATGGTCCGGAGACGTCAAGGCGGCTTCAGAGACTGGAAGCCCAAGCGTTCAGTACGCATTCAACTCAATGAGGTTGATTGTAACTTTCGGCTGGGCAATATATCCA RYIDWLITVPLQVVEFYLILAAIGVGTFVMFRNLMAASIVMLVAGFFGESGAMDNVIDLSAEIWWVIGMAGWGYILYELWSGDVKAASETGSPSVQYAFNSMRLIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATCACAGTCCCACTGCAGGTCGTTGAATTCTACCTAATCCTCGCCGCT---------ATC---GGTGTGGGAACATTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGCAGCATCCATCGTCATGCTAGTGGCTGGATTCTTCGGTGAG---------TCC------------------GGA------GCA---------------------------------ATG------GACAAC------GTCATC---------GAC---------------------------CTGTCCGCT------------------GAGATCTGG---TGGGTCATTGGAATGGCAGGATGGGGATACATCCTGTATGAGCTA---------------TGG------TCC---GGAGACGTCAAGGCG---GCTTCAGAG------ACT---GGAAGCCCAAGCGTT---CAG---TAC---GCA---TTC---AAC---TCAATG---AGGTTGATTGTAACTTTC---------------------------------------------------------------GGCTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------M--DN--VI---D---------LSA------EIW-WVIGMAGWGYILYEL-----W--S-GDVKA-ASE--T-GSPSV-Q-Y-A-F-N-SM-RLIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ156349 [unk-euryarch-HF70_59C08] groupII_euryarchaeote_HF70_39H11_fosmid_DQ156349 gi|77024979|gb|DQ156349| Uncultured marine group II euryarchaeote HF70 39H11 clone fosmid HF70 39H11, complete sequence Uncultured marine group II euryarchaeote HF70 39H11 clone fosmid HF70 39H11, complete sequence DQ156349 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Archaea/Euryarchaeota/Marine Group II/environmental samples] taxon:347541 genomic_DNA other 16FEB2006 #na North_Pacific_Subtropical_Gyre_[Hawaii]/70_m_below_sea_surface Pacific Ocean marine 22.75 -158 Proteorhodopsin lateral gene transfer between marine planktonic Bacteria and Archaea Frigaard,N.U., Martinez,A., Mincer,T.J. and DeLong,E.F. Nature 439 (7078), 847850 (2006) 16482157 #na ATGCGATTTTCTGAGAGCATGGACAGAAATCCATTTTTGAAGAAGCGAACCGCTGTAGTTGGTGGTGCTCTTGCTCTTGCAGCAATCACTATTCCTTCTGCAGCTGCACAAACAACCGAAACAGTAGGTCTCGGAGCTACCGACTATGTGGGTATTTCCTTTTGGATTGCCACAGCAATGATGCTTGCAACGACCGTGTTCTTCTTGGTTGAGCGACAAAATGTTGCGGCCAAGTGGAAGACATCGATGACAGTCGCTGCGCTCGTGACAGGTATCGCATGGTACCACTACACATACATGCGCCAGCACTGGGTCGACAACGGATCCAGTCCAATCGTGTATCGATACATCGATTGGTTGCTCACAGTCCCTCTACAAATTGCTGAGTTCTACCTCATCCTCGCAGCGATTGGTGTTGCGAGCGTTGTGATGTTCCGCAACCTAATGCTGGCCTCTGTTGTCATGCTCGTTGCCGGATTCTTCGGTGAGACTGGTGCATGGGACCTCTTCGGAGATGCAAGCACAGAAATTTGGTGGGCCATTGGAATGGCAGGATGGATTTACATCATCTACGAGATTTTCAAGGGTTCAATCAACGACGCTGCCCAAAAGGCCAGCGAAAGCGTCCAGTTCGCATTCAACTCAATGCGCTGGATCGTGTTGGTTGGATGGGCCATTTACCCACTCGGTTACATGATGGGCAATGACATGCTTCCTGGATTTGGAGAAAATGACATGAACATCATCTACAACCTTGCTGATTTGGTCAACAAGACCGCATTCGGCATGATGGTATGGTATGCAGCAACCATGGATACCAAGGCAGCTGCTGAAACTGAA MRFSESMDRNPFLKKRTAVVGGALALAAITIPSAAAQTTETVGLGATDYVGISFWIATAMMLATTVFFLVERQNVAAKWKTSMTVAALVTGIAWYHYTYMRQHWVDNGSSPIVYRYIDWLLTVPLQIAEFYLILAAIGVASVVMFRNLMLASVVMLVAGFFGETGAWDLFGDASTEIWWAIGMAGWIYIIYEIFKGSINDAAQKASESVQFAFNSMRWIVLVGWAIYPLGYMMGNDMLPGFGENDMNIIYNLADLVNKTAFGMMVWYAATMDTKAAAETE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCGATTTTCTGAGAGCATGGACAGAAATCCATTTTTGAAGAAGCGAACCGCTGTAGTTGGTGGTGCTCTTGCTCTTGCAGCAATCACTATTCCTTCTGCAGCTGCACAAACAACCGAAACAGTAGGTCTCGGAGCTACCGACTATGTGGGTATTTCCTTTTGGATTGCCACAGCAATGATGCTTGCAACGACCGTGTTCTTCTTGGTTGAGCGACAAAATGTTGCGGCC---AAGTGGAAGACATCGATGACAGTCGCTGCGCTCGTGACAGGTATCGCATGGTACCACTACACATACATGCGCCAGCACTGGGTC---------------------------------------------------GACAACGGATCCAGTCCAATCGTGTATCGATACATCGATTGG------------------------TTGCTCACAGTCCCTCTACAAATTGCTGAGTTCTACCTCATCCTCGCAGCG---------ATT---GGTGTTGCGAGCGTT---GTGATG------------------------------------TTCCGCAAC---CTAATGCTGGCCTCTGTTGTCATGCTCGTTGCCGGATTCTTCGGTGAG---------ACT------------------GGT------GCA---------------------------------TGG------GACCTC------TTCGGA---------GAT---------------------------GCAAGCACA------------------GAAATTTGG---TGGGCCATTGGAATGGCAGGATGGATTTACATCATCTACGAGATT---------------TTC------AAG---GGTTCAATCAACGAC---GCTGCCCAA------AAG---GCCAGCGAAAGCGTC---CAG---TTC---GCA---TTC---AAC---TCAATG---CGCTGGATCGTGTTGGTT---------------------------------------------------------------GGATGG---------GCCATTTACCCACTCGGTTACATGATGGGCAATGACATG---CTTCCT---------GGA---TTTGGAGAAAATGACATGAACATCATCTACAACCTTGCTGATTTGGTCAACAAGACCGCATTCGGCATGATGGTATGGTATGCAGCAACCATGGATACCAAGGCAGCTGCTGAAACTGAA--------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------MRFSESMDRNPFLKKRTAVVGGALALAAITIPSAAAQTTETVGLGATDYVGISFWIATAMMLATTVFFLVERQNVAA-KWKTSMTVAALVTGIAWYHYTYMRQHWV-----------------DNGSSPIVYRYIDW--------LLTVPLQIAEFYLILAA---I-GVASV-VM------------FRN-LMLASVVMLVAGFFGE---T------G--A-----------W--DL--FG---D---------AST------EIW-WAIGMAGWIYIIYEI-----F--K-GSIND-AAQ--K-ASESV-Q-F-A-F-N-SM-RWIVLV---------------------GW---AIYPLGYMMGNDM-LP---G-FGENDMNIIYNLADLVNKTAFGMMVWYAATMDTKAAAETE----------------------------------------- [unk-euryarch-HF70_59C08]_DQ156348 [unk-euryarch-HF70_59C08] groupII_euryarchaeote_HF70_59C08_fosmid_DQ156348 gi|77024934|gb|DQ156348| Uncultured marine group II euryarchaeote HF70 59C08 clone fosmid HF70 59C08, complete sequence Uncultured marine group II euryarchaeote HF70 59C08 clone fosmid HF70 59C08, complete sequence DQ156348 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Archaea/Euryarchaeota/Marine Group II/environmental samples] taxon:347540 genomic_DNA other 16FEB2006 #na North_Pacific_Subtropical_Gyre_[Hawaii]/70_m_below_sea_surface Pacific Ocean marine 22.75 -158 Proteorhodopsin lateral gene transfer between marine planktonic Bacteria and Archaea Frigaard,N.U., Martinez,A., Mincer,T.J. and DeLong,E.F. Nature 439 (7078), 847850 (2006) 16482157 #na ATGCGATTTTCTGAGAGCATGGACATAAATCCATTTTTGAAGAAGCGAACCGCTGTAGTTGGTGGTGCTCTTGCTCTTGCAGCAATCACCATTCCTTCTGCAGCTGCACAAACAACCGAAACAGTAGGTCTCGGAGCTACCGACTATGTGGGTATTTCCTTTTGGATTGCCACAGCAATGATGCTTGCAACGACCGTGTTCTTCTTGGTTGAGCGACAAAATGTTGCGGCCAAGTGGAAGACATCGATGACAGTCGCTGCGCTCGTGACAGGTATCGCATGGTACCACTACACATACATGCGCCAGCACTGGGTCGACAACGGATCCAGTCCAATCGTGTATCGATACATCGATTGGTTGCTCACAGTCCCTCTACAAATTGCTGAGTTCTACCTCATCCTCGCAGCGATTGGTGTTGCGAGCGTTGTGATGTTCCGCAACCTAATGCTGGCCTCTGTTGTCATGCTCGTTGCCGGATTCTTCGGTGAGACTGGTGCGTGGGACCTCTTCGGAGATGCAAGCACAGAAATTTGGTGGGCCATTGGAATGGCAGGATGGATTTACATCATCTACGAGATTTTCAGGGGTTCAATCAACGACGCTGCCCAAAAGGCCAGCGAAAGCGTCCAGTTCGCATTCAACTCAATGCGCTGGATCGTGTTGGTTGGATGGGCCATTTACCCACTCGGTTACATGATGGGCAATGACATGCTTCCTGGATTTGGAGAAAATGACATGAACATCATCTACAACCTTGCTGATTTGGTCAACAAGACCGCATTCGGCATGATGGTATGGTATGCAGCAACCATGGATACCAAGGCAGCTGCTGAAACTGAA MRFSESMDINPFLKKRTAVVGGALALAAITIPSAAAQTTETVGLGATDYVGISFWIATAMMLATTVFFLVERQNVAAKWKTSMTVAALVTGIAWYHYTYMRQHWVDNGSSPIVYRYIDWLLTVPLQIAEFYLILAAIGVASVVMFRNLMLASVVMLVAGFFGETGAWDLFGDASTEIWWAIGMAGWIYIIYEIFRGSINDAAQKASESVQFAFNSMRWIVLVGWAIYPLGYMMGNDMLPGFGENDMNIIYNLADLVNKTAFGMMVWYAATMDTKAAAETE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCGATTTTCTGAGAGCATGGACATAAATCCATTTTTGAAGAAGCGAACCGCTGTAGTTGGTGGTGCTCTTGCTCTTGCAGCAATCACCATTCCTTCTGCAGCTGCACAAACAACCGAAACAGTAGGTCTCGGAGCTACCGACTATGTGGGTATTTCCTTTTGGATTGCCACAGCAATGATGCTTGCAACGACCGTGTTCTTCTTGGTTGAGCGACAAAATGTTGCGGCC---AAGTGGAAGACATCGATGACAGTCGCTGCGCTCGTGACAGGTATCGCATGGTACCACTACACATACATGCGCCAGCACTGGGTC---------------------------------------------------GACAACGGATCCAGTCCAATCGTGTATCGATACATCGATTGG------------------------TTGCTCACAGTCCCTCTACAAATTGCTGAGTTCTACCTCATCCTCGCAGCG---------ATT---GGTGTTGCGAGCGTT---GTGATG------------------------------------TTCCGCAAC---CTAATGCTGGCCTCTGTTGTCATGCTCGTTGCCGGATTCTTCGGTGAG---------ACT------------------GGT------GCG---------------------------------TGG------GACCTC------TTCGGA---------GAT---------------------------GCAAGCACA------------------GAAATTTGG---TGGGCCATTGGAATGGCAGGATGGATTTACATCATCTACGAGATT---------------TTC------AGG---GGTTCAATCAACGAC---GCTGCCCAA------AAG---GCCAGCGAAAGCGTC---CAG---TTC---GCA---TTC---AAC---TCAATG---CGCTGGATCGTGTTGGTT---------------------------------------------------------------GGATGG---------GCCATTTACCCACTCGGTTACATGATGGGCAATGACATG---CTTCCT---------GGA---TTTGGAGAAAATGACATGAACATCATCTACAACCTTGCTGATTTGGTCAACAAGACCGCATTCGGCATGATGGTATGGTATGCAGCAACCATGGATACCAAGGCAGCTGCTGAAACTGAA--------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------MRFSESMDINPFLKKRTAVVGGALALAAITIPSAAAQTTETVGLGATDYVGISFWIATAMMLATTVFFLVERQNVAA-KWKTSMTVAALVTGIAWYHYTYMRQHWV-----------------DNGSSPIVYRYIDW--------LLTVPLQIAEFYLILAA---I-GVASV-VM------------FRN-LMLASVVMLVAGFFGE---T------G--A-----------W--DL--FG---D---------AST------EIW-WAIGMAGWIYIIYEI-----F--R-GSIND-AAQ--K-ASESV-Q-F-A-F-N-SM-RWIVLV---------------------GW---AIYPLGYMMGNDM-LP---G-FGENDMNIIYNLADLVNKTAFGMMVWYAATMDTKAAAETE----------------------------------------- [unk-euryarch-HF70_59C08]_DQ156364 [unk-euryarch-HF70_59C08] fosmid_HF70_95E04_env_samples_DQ156364 gi|76799934|gb|DQ156364| Uncultured organism clone fosmid HF70 95E04 proteorhodopsin gene, partial cds Uncultured organism clone fosmid HF70 95E04 proteorhodopsin gene, partial cds DQ156364 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 16FEB2006 #na North_Pacific_Subtropical_Gyre_[Hawaii]/70_m_below_sea_surface Pacific Ocean marine 22.75 -158 Proteorhodopsin lateral gene transfer between marine planktonic Bacteria and Archaea Frigaard,N.U., Martinez,A., Mincer,T.J. and DeLong,E.F. Nature 439 (7078), 847850 (2006) 16482157 #na TTTTGGATTGCCACAGCAATGATGCTTGCAACGACCGTGTTCTTCTTGGTTGAGCGACAAAATGTTGCGGCCAAGTGGAAGACATCGATGACAGTCGCTGCGCTCGTGACAGGTATCGCATGGTACCACTACACATACATGCGCCAGCACTGGGTCGACAACGGATCCAGTCCAATCGTGTATCGATACATCGATTGGTTGCTCACAGTCCCTCTACAAATTGCTGAGTTCTACCTCATCCTCGCAGCGATTGGTGTTGCGAGCGTTGTGATGTTCCGCAACCTAATGCTGGCCTCTGTTGTCATGCTCGTTGCCGGATTCTTCGGTGAGACTGGTGCATGGGACCTCTTCGGAGATGCAAGCACAGAAATTTGGTGGGCCATTGGAATGGCAGGATGGATTTACATCATCTACGAGATTTTCAAGGGTTCAATCAACGACGCTGCCCAAAAGGCCAGCGAAAGCGTCCAGTTCGCATTCAACTCAATGCGCTGGATCGTGTTGGTTGGATGGGCCATTTACCCACTCGGTTACATGATGGGCAATGACATGCTTCCTGGATTTGGAGAAAATGACATGAACATCATCTACAACCTTGCT FWIATAMMLATTVFFLVERQNVAAKWKTSMTVAALVTGIAWYHYTYMRQHWVDNGSSPIVYRYIDWLLTVPLQIAEFYLILAAIGVASVVMFRNLMLASVVMLVAGFFGETGAWDLFGDASTEIWWAIGMAGWIYIIYEIFKGSINDAAQKASESVQFAFNSMRWIVLVGWAIYPLGYMMGNDMLPGFGENDMNIIYNLA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGGATTGCCACAGCAATGATGCTTGCAACGACCGTGTTCTTCTTGGTTGAGCGACAAAATGTTGCGGCC---AAGTGGAAGACATCGATGACAGTCGCTGCGCTCGTGACAGGTATCGCATGGTACCACTACACATACATGCGCCAGCACTGGGTC---------------------------------------------------GACAACGGATCCAGTCCAATCGTGTATCGATACATCGATTGG------------------------TTGCTCACAGTCCCTCTACAAATTGCTGAGTTCTACCTCATCCTCGCAGCG---------ATT---GGTGTTGCGAGCGTT---GTGATG------------------------------------TTCCGCAAC---CTAATGCTGGCCTCTGTTGTCATGCTCGTTGCCGGATTCTTCGGTGAG---------ACT------------------GGT------GCA---------------------------------TGG------GACCTC------TTCGGA---------GAT---------------------------GCAAGCACA------------------GAAATTTGG---TGGGCCATTGGAATGGCAGGATGGATTTACATCATCTACGAGATT---------------TTC------AAG---GGTTCAATCAACGAC---GCTGCCCAA------AAG---GCCAGCGAAAGCGTC---CAG---TTC---GCA---TTC---AAC---TCAATG---CGCTGGATCGTGTTGGTT---------------------------------------------------------------GGATGG---------GCCATTTACCCACTCGGTTACATGATGGGCAATGACATG---CTTCCT---------GGA---TTTGGAGAAAATGACATGAACATCATCTACAACCTTGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------------------------------------------FWIATAMMLATTVFFLVERQNVAA-KWKTSMTVAALVTGIAWYHYTYMRQHWV-----------------DNGSSPIVYRYIDW--------LLTVPLQIAEFYLILAA---I-GVASV-VM------------FRN-LMLASVVMLVAGFFGE---T------G--A-----------W--DL--FG---D---------AST------EIW-WAIGMAGWIYIIYEI-----F--K-GSIND-AAQ--K-ASESV-Q-F-A-F-N-SM-RWIVLV---------------------GW---AIYPLGYMMGNDM-LP---G-FGENDMNIIYNLA-------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ156366 [unk-euryarch-HF70_59C08] fosmid_HF70_105F02_env_samples_DQ156366 gi|76799938|gb|DQ156366| Uncultured organism clone fosmid HF70 105F02 proteorhodopsin gene, partial cds Uncultured organism clone fosmid HF70 105F02 proteorhodopsin gene, partial cds DQ156366 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 16FEB2006 #na North_Pacific_Subtropical_Gyre_[Hawaii]/70_m_below_sea_surface Pacific Ocean marine 22.75 -158 Proteorhodopsin lateral gene transfer between marine planktonic Bacteria and Archaea Frigaard,N.U., Martinez,A., Mincer,T.J. and DeLong,E.F. Nature 439 (7078), 847850 (2006) 16482157 #na TTTTGGATTGCCACAGCAATGATGCTTGCAACGACCGTGTTCTTCTTGGTTGAGCGACAAAATGTTGCGGCCAAGTGGAAGACATCGATGACAGTCGCTGCGCTCGTGACAGGTATCGCATGGTACCACTACACATACATGCGCCAGCACTGGGTCGACAACGGATCCAGTCCAATCGTGTATCGATACATCGATTGGTTGCTCACAGTCCCTCTACAAATTGCTGAGTTCTACCTCATCCTCGCAGCGATTGGTGTTGCGAGCGTTGTGATGTTCCGCAACCTAATGCTGGCCTCTGTTGTCATGCTCGTTGCCGGATTCTTCGGTGAGACTGGTGCATGGGACCTCTTCGGAGATGCAAGCACAGAAATTTGGTGGGCCATTGGAATGGCAGGATGGATTTACATCATCTACGAGATTTTCAAGGGTTCAATCAACGACGCTGCCCAAAAGGCCAGCGAAAGCGTCCAGTTCGCATTCAACTCAATGCGCTGGATCGTGTTGGTTGGATGGGCCATTTACCCACTCGGTTACATGATGGGCAATGACATGCTTCCTGGATTTGGAGAAAATGACATGAACATCATCTACAACCTTGCT FWIATAMMLATTVFFLVERQNVAAKWKTSMTVAALVTGIAWYHYTYMRQHWVDNGSSPIVYRYIDWLLTVPLQIAEFYLILAAIGVASVVMFRNLMLASVVMLVAGFFGETGAWDLFGDASTEIWWAIGMAGWIYIIYEIFKGSINDAAQKASESVQFAFNSMRWIVLVGWAIYPLGYMMGNDMLPGFGENDMNIIYNLA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGGATTGCCACAGCAATGATGCTTGCAACGACCGTGTTCTTCTTGGTTGAGCGACAAAATGTTGCGGCC---AAGTGGAAGACATCGATGACAGTCGCTGCGCTCGTGACAGGTATCGCATGGTACCACTACACATACATGCGCCAGCACTGGGTC---------------------------------------------------GACAACGGATCCAGTCCAATCGTGTATCGATACATCGATTGG------------------------TTGCTCACAGTCCCTCTACAAATTGCTGAGTTCTACCTCATCCTCGCAGCG---------ATT---GGTGTTGCGAGCGTT---GTGATG------------------------------------TTCCGCAAC---CTAATGCTGGCCTCTGTTGTCATGCTCGTTGCCGGATTCTTCGGTGAG---------ACT------------------GGT------GCA---------------------------------TGG------GACCTC------TTCGGA---------GAT---------------------------GCAAGCACA------------------GAAATTTGG---TGGGCCATTGGAATGGCAGGATGGATTTACATCATCTACGAGATT---------------TTC------AAG---GGTTCAATCAACGAC---GCTGCCCAA------AAG---GCCAGCGAAAGCGTC---CAG---TTC---GCA---TTC---AAC---TCAATG---CGCTGGATCGTGTTGGTT---------------------------------------------------------------GGATGG---------GCCATTTACCCACTCGGTTACATGATGGGCAATGACATG---CTTCCT---------GGA---TTTGGAGAAAATGACATGAACATCATCTACAACCTTGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------------------------------------------FWIATAMMLATTVFFLVERQNVAA-KWKTSMTVAALVTGIAWYHYTYMRQHWV-----------------DNGSSPIVYRYIDW--------LLTVPLQIAEFYLILAA---I-GVASV-VM------------FRN-LMLASVVMLVAGFFGE---T------G--A-----------W--DL--FG---D---------AST------EIW-WAIGMAGWIYIIYEI-----F--K-GSIND-AAQ--K-ASESV-Q-F-A-F-N-SM-RWIVLV---------------------GW---AIYPLGYMMGNDM-LP---G-FGENDMNIIYNLA-------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ156365 [unk-euryarch-HF70_59C08] fosmid_HF70_97E04_env_samples_DQ156365 gi|76799936|gb|DQ156365| Uncultured organism clone fosmid HF70 97E04 proteorhodopsin gene, partial cds Uncultured organism clone fosmid HF70 97E04 proteorhodopsin gene, partial cds DQ156365 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 16FEB2006 #na North_Pacific_Subtropical_Gyre_[Hawaii]/70_m_below_sea_surface Pacific Ocean marine 22.75 -158 Proteorhodopsin lateral gene transfer between marine planktonic Bacteria and Archaea Frigaard,N.U., Martinez,A., Mincer,T.J. and DeLong,E.F. Nature 439 (7078), 847850 (2006) 16482157 #na TTTTGGATTGCCACAGCAATGATGCTTGCAACGACCGTGTTCTTCTTGGTTGAGCGACAAAATGTTGCGGCCAAGTGGAAGACATCGATGACAGTCGCTGCGCTCGTGACAGGTATCGCATGGTACCACTACACATACATGCGCCAGCACTGGGTCGACAACGGATCCAGTCCAATCGTGTATCGATACATCGATTGGTTGCTCACAGTCCCTCTACAAATTGCTGAGTTCTACCTCATCCTCGCAGCGATTGGTGTTGCGAGCGTTGTGATGTTCCGCAACCTAATGCTGGCCTCTGTTGTCATGCTCGTTGCCGGATTCTTCGGTGAGACTGGTGCATGGGACCTCTTCGGAGATGCAAGCACAGAAATTTGGTGGGCCATTGGAATGGCAGGATGGATTTACATCATCTACGAGATTTTCAAGGGTTCAATCAACGACGCTGCCCAAAAGGCCAGCGAAAGCGTCCAGTTCGCATTCAACTCAATGCGCTGGATCGTGTTGGTTGGATGGGCCATTTACCCACTCGGTTACATGATGGGCAATGACATGCTTCCTGGATTTGGAGAAAATGACATGAACATCATCTACAACCTTGCT FWIATAMMLATTVFFLVERQNVAAKWKTSMTVAALVTGIAWYHYTYMRQHWVDNGSSPIVYRYIDWLLTVPLQIAEFYLILAAIGVASVVMFRNLMLASVVMLVAGFFGETGAWDLFGDASTEIWWAIGMAGWIYIIYEIFKGSINDAAQKASESVQFAFNSMRWIVLVGWAIYPLGYMMGNDMLPGFGENDMNIIYNLA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGGATTGCCACAGCAATGATGCTTGCAACGACCGTGTTCTTCTTGGTTGAGCGACAAAATGTTGCGGCC---AAGTGGAAGACATCGATGACAGTCGCTGCGCTCGTGACAGGTATCGCATGGTACCACTACACATACATGCGCCAGCACTGGGTC---------------------------------------------------GACAACGGATCCAGTCCAATCGTGTATCGATACATCGATTGG------------------------TTGCTCACAGTCCCTCTACAAATTGCTGAGTTCTACCTCATCCTCGCAGCG---------ATT---GGTGTTGCGAGCGTT---GTGATG------------------------------------TTCCGCAAC---CTAATGCTGGCCTCTGTTGTCATGCTCGTTGCCGGATTCTTCGGTGAG---------ACT------------------GGT------GCA---------------------------------TGG------GACCTC------TTCGGA---------GAT---------------------------GCAAGCACA------------------GAAATTTGG---TGGGCCATTGGAATGGCAGGATGGATTTACATCATCTACGAGATT---------------TTC------AAG---GGTTCAATCAACGAC---GCTGCCCAA------AAG---GCCAGCGAAAGCGTC---CAG---TTC---GCA---TTC---AAC---TCAATG---CGCTGGATCGTGTTGGTT---------------------------------------------------------------GGATGG---------GCCATTTACCCACTCGGTTACATGATGGGCAATGACATG---CTTCCT---------GGA---TTTGGAGAAAATGACATGAACATCATCTACAACCTTGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------------------------------------------FWIATAMMLATTVFFLVERQNVAA-KWKTSMTVAALVTGIAWYHYTYMRQHWV-----------------DNGSSPIVYRYIDW--------LLTVPLQIAEFYLILAA---I-GVASV-VM------------FRN-LMLASVVMLVAGFFGE---T------G--A-----------W--DL--FG---D---------AST------EIW-WAIGMAGWIYIIYEI-----F--K-GSIND-AAQ--K-ASESV-Q-F-A-F-N-SM-RWIVLV---------------------GW---AIYPLGYMMGNDM-LP---G-FGENDMNIIYNLA-------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ156368 [unk-euryarch-HF70_59C08] fosmid_HF130_27A09_env_samples_DQ156368 gi|76799942|gb|DQ156368| Uncultured organism clone fosmid HF130 27A09 proteorhodopsin gene, partial cds Uncultured organism clone fosmid HF130 27A09 proteorhodopsin gene, partial cds DQ156368 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 16FEB2006 #na North_Pacific_Subtropical_Gyre_[Hawaii]/130_m_below_sea_surface Pacific Ocean marine 22.75 -158 Proteorhodopsin lateral gene transfer between marine planktonic Bacteria and Archaea Frigaard,N.U., Martinez,A., Mincer,T.J. and DeLong,E.F. Nature 439 (7078), 847850 (2006) 16482157 #na TTTTGGATTGCCACAGCAATGATGCTTGCAACGACCGTGTTCTTCTTGGTTGAGCGGCAAAACGTTGCGGCCAAGTGGAAGACATCGATGACAGTCGCAGCGCTCGTGACAGGTATCGCATGGTACCACTACACCTACATGCGCCAGCACTGGGTCGACAACGAATCCAGTCCAATCGTGTATCGATACATCGATTGGTTGCTCACAGTCCCTCTACAGATTGCTGAGTTCTACCTCATCCTCGCAGCGATTGGTGTTGCGAGCGTAGTGATGTTCCGCAACCTAATGCTGGCCTCTGTTGTCATGCTCGTTGCCGGATTCTTCGGTGAGACGGGTGCTTTGGACCTCTTCGGAGGCGCAAGCACAGAAATTTGGTGGGCAATTGGAATGGCAGGATGGATTTACATCATCTACGAGATTTTCAAGGGATCAATCAACGACGCTGCTCAAAAGGCCAGCGAAAGCGTACAGTTCGCATTCAACTCAATGCGCTGGATCGTGTTGGTTGGATGGGCCATTTACCCACTCGGTTACATGATGGGCAATGACATGCTTCCAGGATTTGGAGAAAATGACATGAACATCATCTACAACCTAGCT FWIATAMMLATTVFFLVERQNVAAKWKTSMTVAALVTGIAWYHYTYMRQHWVDNESSPIVYRYIDWLLTVPLQIAEFYLILAAIGVASVVMFRNLMLASVVMLVAGFFGETGALDLFGGASTEIWWAIGMAGWIYIIYEIFKGSINDAAQKASESVQFAFNSMRWIVLVGWAIYPLGYMMGNDMLPGFGENDMNIIYNLA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGGATTGCCACAGCAATGATGCTTGCAACGACCGTGTTCTTCTTGGTTGAGCGGCAAAACGTTGCGGCC---AAGTGGAAGACATCGATGACAGTCGCAGCGCTCGTGACAGGTATCGCATGGTACCACTACACCTACATGCGCCAGCACTGGGTC---------------------------------------------------GACAACGAATCCAGTCCAATCGTGTATCGATACATCGATTGG------------------------TTGCTCACAGTCCCTCTACAGATTGCTGAGTTCTACCTCATCCTCGCAGCG---------ATT---GGTGTTGCGAGCGTA---GTGATG------------------------------------TTCCGCAAC---CTAATGCTGGCCTCTGTTGTCATGCTCGTTGCCGGATTCTTCGGTGAG---------ACG------------------GGT------GCT---------------------------------TTG------GACCTC------TTCGGA---------GGC---------------------------GCAAGCACA------------------GAAATTTGG---TGGGCAATTGGAATGGCAGGATGGATTTACATCATCTACGAGATT---------------TTC------AAG---GGATCAATCAACGAC---GCTGCTCAA------AAG---GCCAGCGAAAGCGTA---CAG---TTC---GCA---TTC---AAC---TCAATG---CGCTGGATCGTGTTGGTT---------------------------------------------------------------GGATGG---------GCCATTTACCCACTCGGTTACATGATGGGCAATGACATG---CTTCCA---------GGA---TTTGGAGAAAATGACATGAACATCATCTACAACCTAGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------------------------------------------FWIATAMMLATTVFFLVERQNVAA-KWKTSMTVAALVTGIAWYHYTYMRQHWV-----------------DNESSPIVYRYIDW--------LLTVPLQIAEFYLILAA---I-GVASV-VM------------FRN-LMLASVVMLVAGFFGE---T------G--A-----------L--DL--FG---G---------AST------EIW-WAIGMAGWIYIIYEI-----F--K-GSIND-AAQ--K-ASESV-Q-F-A-F-N-SM-RWIVLV---------------------GW---AIYPLGYMMGNDM-LP---G-FGENDMNIIYNLA-------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ156367 [unk-euryarch-HF70_59C08] fosmid_HF130_17D07_env_samples_DQ156367 gi|76799940|gb|DQ156367| Uncultured organism clone fosmid HF130 17D07 proteorhodopsin gene, partial cds Uncultured organism clone fosmid HF130 17D07 proteorhodopsin gene, partial cds DQ156367 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 16FEB2006 #na North_Pacific_Subtropical_Gyre_[Hawaii]/130_m_below_sea_surface Pacific Ocean marine 22.75 -158 Proteorhodopsin lateral gene transfer between marine planktonic Bacteria and Archaea Frigaard,N.U., Martinez,A., Mincer,T.J. and DeLong,E.F. Nature 439 (7078), 847850 (2006) 16482157 #na TTTTGGATTGCCACAGCAATGATGCTTGCAACGACCGTGTTCTTCTTGGTTGAGCGACAAAATGTTGCTGCCAAGTGGAAGACATCGATGACAGTCGCTGCGCTCGTGACAGGTATCGCATGGTACCACTACACCTACATGCGCCAGCACTGGGTCGACAACGGATCCAGTCCAATCGTGTATCGATACATCGATTGGTTGCTCACAGTCCCTCTACAGATTGCTGAGTTCTACCTCATCCTCGCAGCGATTGGTGTTGCGAGTGTTGTGATGTTCCGCAACCTAATGCTGGCCTCTGTTGTCATGCTCGTTGCCGGGTTCTTCGGTGAGACGGGAGCATGGGACCTCTTCGGAGGTGCAAGCACAGAAATTTGGTGGGCCATTGGAATGGCAGGGTGGATTTACATCATCTACGAGATTTTCAAGGGATCAATCAACGATGCTGCACAGAAGGCCAGTGAAAGTGTCCAGTTCGCATTCAACTCAATGCGCTGGATCGTGTTGGTTGGATGGGCCATTTACCCACTCGGTTACATGATGGGCAATGACATGCTTCCTGGATTTGGAGAAAATGACATGAACATCATCTACAACCTAGCT FWIATAMMLATTVFFLVERQNVAAKWKTSMTVAALVTGIAWYHYTYMRQHWVDNGSSPIVYRYIDWLLTVPLQIAEFYLILAAIGVASVVMFRNLMLASVVMLVAGFFGETGAWDLFGGASTEIWWAIGMAGWIYIIYEIFKGSINDAAQKASESVQFAFNSMRWIVLVGWAIYPLGYMMGNDMLPGFGENDMNIIYNLA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGGATTGCCACAGCAATGATGCTTGCAACGACCGTGTTCTTCTTGGTTGAGCGACAAAATGTTGCTGCC---AAGTGGAAGACATCGATGACAGTCGCTGCGCTCGTGACAGGTATCGCATGGTACCACTACACCTACATGCGCCAGCACTGGGTC---------------------------------------------------GACAACGGATCCAGTCCAATCGTGTATCGATACATCGATTGG------------------------TTGCTCACAGTCCCTCTACAGATTGCTGAGTTCTACCTCATCCTCGCAGCG---------ATT---GGTGTTGCGAGTGTT---GTGATG------------------------------------TTCCGCAAC---CTAATGCTGGCCTCTGTTGTCATGCTCGTTGCCGGGTTCTTCGGTGAG---------ACG------------------GGA------GCA---------------------------------TGG------GACCTC------TTCGGA---------GGT---------------------------GCAAGCACA------------------GAAATTTGG---TGGGCCATTGGAATGGCAGGGTGGATTTACATCATCTACGAGATT---------------TTC------AAG---GGATCAATCAACGAT---GCTGCACAG------AAG---GCCAGTGAAAGTGTC---CAG---TTC---GCA---TTC---AAC---TCAATG---CGCTGGATCGTGTTGGTT---------------------------------------------------------------GGATGG---------GCCATTTACCCACTCGGTTACATGATGGGCAATGACATG---CTTCCT---------GGA---TTTGGAGAAAATGACATGAACATCATCTACAACCTAGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------------------------------------------FWIATAMMLATTVFFLVERQNVAA-KWKTSMTVAALVTGIAWYHYTYMRQHWV-----------------DNGSSPIVYRYIDW--------LLTVPLQIAEFYLILAA---I-GVASV-VM------------FRN-LMLASVVMLVAGFFGE---T------G--A-----------W--DL--FG---G---------AST------EIW-WAIGMAGWIYIIYEI-----F--K-GSIND-AAQ--K-ASESV-Q-F-A-F-N-SM-RWIVLV---------------------GW---AIYPLGYMMGNDM-LP---G-FGENDMNIIYNLA-------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ156369 [unk-euryarch-HF70_59C08] fosmid_HF130_83E02_env_samples_DQ156369 gi|76799944|gb|DQ156369| Uncultured organism clone fosmid HF130 83E02 proteorhodopsin gene, partial cds Uncultured organism clone fosmid HF130 83E02 proteorhodopsin gene, partial cds DQ156369 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 16FEB2006 #na North_Pacific_Subtropical_Gyre_[Hawaii]/130_m_below_sea_surface Pacific Ocean marine 22.75 -158 Proteorhodopsin lateral gene transfer between marine planktonic Bacteria and Archaea Frigaard,N.U., Martinez,A., Mincer,T.J. and DeLong,E.F. Nature 439 (7078), 847850 (2006) 16482157 #na TTTTGGATTGCCACAGCAATGATGCTTGCAACGACCGTGTTCTTCTTGGTTGAGCGACAAAATGTTGCTGCCAAGTGGAAGACATCGATGACAGTCGCAGCGCTCGTGACAGGTATCGCATGGTACCACTACACCTACATGCGCCAGCACTGGGTCGACAACGGATCCAGTCCAATCGTGTATCGATACATCGATTGGTTGCTCACAGTCCCTCTACAAATTGCTGAGTTCTACCTCATCCTCGCAGCGATTGGTGTTGCAAGCGTAGTGATGTTCCGCAACCTGATGGTTGCCTCTATTGTCATGCTCGTCGCCGGATTCTTCGGTGAGACGGGTGCATGGGATCTCTTCGGAGATGCAAGCACAGAAATTTGGTGGGCCATTGGAATGGCTGGCTGGATTTACATCATCTACGAGATTTTCAAGGGATCAATCAACGACGCTGCCCAAAAGGCCAGCGAAAGCGTAAAGTTCGCATTCAACTCAATGCGCTGGATCGTGTTGGTTGGATGGGCCATTTACCCACTCGGTTACATGATGGGCAACGACATGATCCCCGGCTTTGACATGGATGACATGAACATCATCTACAACCTAGCT FWIATAMMLATTVFFLVERQNVAAKWKTSMTVAALVTGIAWYHYTYMRQHWVDNGSSPIVYRYIDWLLTVPLQIAEFYLILAAIGVASVVMFRNLMVASIVMLVAGFFGETGAWDLFGDASTEIWWAIGMAGWIYIIYEIFKGSINDAAQKASESVKFAFNSMRWIVLVGWAIYPLGYMMGNDMIPGFDMDDMNIIYNLA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGGATTGCCACAGCAATGATGCTTGCAACGACCGTGTTCTTCTTGGTTGAGCGACAAAATGTTGCTGCC---AAGTGGAAGACATCGATGACAGTCGCAGCGCTCGTGACAGGTATCGCATGGTACCACTACACCTACATGCGCCAGCACTGGGTC---------------------------------------------------GACAACGGATCCAGTCCAATCGTGTATCGATACATCGATTGG------------------------TTGCTCACAGTCCCTCTACAAATTGCTGAGTTCTACCTCATCCTCGCAGCG---------ATT---GGTGTTGCAAGCGTA---GTGATG------------------------------------TTCCGCAAC---CTGATGGTTGCCTCTATTGTCATGCTCGTCGCCGGATTCTTCGGTGAG---------ACG------------------GGT------GCA---------------------------------TGG------GATCTC------TTCGGA---------GAT---------------------------GCAAGCACA------------------GAAATTTGG---TGGGCCATTGGAATGGCTGGCTGGATTTACATCATCTACGAGATT---------------TTC------AAG---GGATCAATCAACGAC---GCTGCCCAA------AAG---GCCAGCGAAAGCGTA---AAG---TTC---GCA---TTC---AAC---TCAATG---CGCTGGATCGTGTTGGTT---------------------------------------------------------------GGATGG---------GCCATTTACCCACTCGGTTACATGATGGGCAACGACATG---ATCCCC---------GGC---TTTGACATGGATGACATGAACATCATCTACAACCTAGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------------------------------------------FWIATAMMLATTVFFLVERQNVAA-KWKTSMTVAALVTGIAWYHYTYMRQHWV-----------------DNGSSPIVYRYIDW--------LLTVPLQIAEFYLILAA---I-GVASV-VM------------FRN-LMVASIVMLVAGFFGE---T------G--A-----------W--DL--FG---D---------AST------EIW-WAIGMAGWIYIIYEI-----F--K-GSIND-AAQ--K-ASESV-K-F-A-F-N-SM-RWIVLV---------------------GW---AIYPLGYMMGNDM-IP---G-FDMDDMNIIYNLA-------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_1105097099560 [unk-euryarch-HF70_59C08] JCVI_ORF_1105097099560 jcvi|1105097099560| 1105097099560 JCVI ORF 1105097099560 1105097099560 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.22_0.8 other #na 26-FEB-2003 Open_Ocean/5m_depth/S_36.7_psu/GS000b/Sargasso_Station_11/Sargasso_Sea Sargasso Sea marine 31.175 -64.32433 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf GTCGCTGCCCTCGTGACAGGTATCGCATGGTACCACTACACCTACATGCGCCAGCACTGGGTGGACAACGGATCCAGTCCAATCGTGTATCGATACATCGATTGGTTGCTCACAGTCCCACTACAGATTGCTGAGTTCTACCTCATCCTCGCTGCGATTGGTGTCGCTAGTGTCGTGATGTTCCGCAATCTGATGATTGCCTCAATTGTGATGCTTGTTGCCGGATTCTTCGGTGAAACCGGTGCTTGGGAAATCTTTGGAGACGCGAGCACAGAGATTTGGTGGGCCATTGGAATGGCTGGATGGATTTACATCATCTACGAGATTTTCAAGGGTTCGATCAACGATGCCGCTCAACAGGCCAGTGAAAGCGTCCAGTTCGCATTCAACTCAATGCGCTGGATTGTTTTGGTAGGATGGGCCATCTATCCACTTGGATACATGATGGGCAACGATATGATCCCTGGGTTCGGAGAAGGTGACATGAACATCATCTACAACCTTGCTGATTTGGTCAATAAGACCGCATTCGGCATGATGGTATGGTATGCTGCAACCATGGACACAAAGGCTGCAGCATCTGAA VAALVTGIAWYHYTYMRQHWVDNGSSPIVYRYIDWLLTVPLQIAEFYLILAAIGVASVVMFRNLMIASIVMLVAGFFGETGAWEIFGDASTEIWWAIGMAGWIYIIYEIFKGSINDAAQQASESVQFAFNSMRWIVLVGWAIYPLGYMMGNDMIPGFGEGDMNIIYNLADLVNKTAFGMMVWYAATMDTKAAASE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCGCTGCCCTCGTGACAGGTATCGCATGGTACCACTACACCTACATGCGCCAGCACTGGGTG---------------------------------------------------GACAACGGATCCAGTCCAATCGTGTATCGATACATCGATTGG------------------------TTGCTCACAGTCCCACTACAGATTGCTGAGTTCTACCTCATCCTCGCTGCG---------ATT---GGTGTCGCTAGTGTC---GTGATG------------------------------------TTCCGCAAT---CTGATGATTGCCTCAATTGTGATGCTTGTTGCCGGATTCTTCGGTGAA---------ACC------------------GGT------GCT---------------------------------TGG------GAAATC------TTTGGA---------GAC---------------------------GCGAGCACA------------------GAGATTTGG---TGGGCCATTGGAATGGCTGGATGGATTTACATCATCTACGAGATT---------------TTC------AAG---GGTTCGATCAACGAT---GCCGCTCAA------CAG---GCCAGTGAAAGCGTC---CAG---TTC---GCA---TTC---AAC---TCAATG---CGCTGGATTGTTTTGGTA---------------------------------------------------------------GGATGG---------GCCATCTATCCACTTGGATACATGATGGGCAACGATATG---ATCCCT---------GGG---TTCGGAGAAGGTGACATGAACATCATCTACAACCTTGCTGATTTGGTCAATAAGACCGCATTCGGCATGATGGTATGGTATGCTGCAACCATGGACACAAAGGCTGCAGCATCTGAA------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------VAALVTGIAWYHYTYMRQHWV-----------------DNGSSPIVYRYIDW--------LLTVPLQIAEFYLILAA---I-GVASV-VM------------FRN-LMIASIVMLVAGFFGE---T------G--A-----------W--EI--FG---D---------AST------EIW-WAIGMAGWIYIIYEI-----F--K-GSIND-AAQ--Q-ASESV-Q-F-A-F-N-SM-RWIVLV---------------------GW---AIYPLGYMMGNDM-IP---G-FGEGDMNIIYNLADLVNKTAFGMMVWYAATMDTKAAASE------------------------------------------ [unk-euryarch-HF70_59C08]_DQ156370 [unk-euryarch-HF70_59C08] fosmid_HF130_30F08_env_samples_DQ156370 gi|76799946|gb|DQ156370| Uncultured organism clone fosmid HF130 30F08 proteorhodopsin gene, partial cds Uncultured organism clone fosmid HF130 30F08 proteorhodopsin gene, partial cds DQ156370 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 16FEB2006 #na North_Pacific_Subtropical_Gyre_[Hawaii]/130_m_below_sea_surface Pacific Ocean marine 22.75 -158 Proteorhodopsin lateral gene transfer between marine planktonic Bacteria and Archaea Frigaard,N.U., Martinez,A., Mincer,T.J. and DeLong,E.F. Nature 439 (7078), 847850 (2006) 16482157 #na TTTTGGATTGCCACAGCAATGATGCTGGCCACGACCGTGTTCTTCTTGGTTGAGCGACAAAACGTTGCGGCCAAGTGGAAGACATCAATGTCAGTCGCTGCCCTCGTGACAGGTATCGCATGGTACCACTACACCTACATGCGCCAGCACTGGGTGGACAACGGATCCAGTCCAATCGTGTATCGATACATCGATTGGTTGCTCACAGTCCCACTGCAGATTGCTGAATTCTACCTCATCCTCGCTGCGATTGGTGTCGCTAGTGTCGTGATGTTCCGCAATCTGATGATTGCCTCAATTGTGATGCTTGTTGCCGGGTTCTTCGGTGAAACCGGTGCATGGGAAATCTTCGGAGACGCGAGCACAGAGATTTGGTGGGCCATTGGAATGGCTGGATGGATTTACATCATCTACGAGATTTTCAAGGGTTCAATCAACGATGCCGCTCAACAGGCCAGTGAAAGCGTCCAGTTCGCATTCAATTCGATGCGCTGGATTGTCTTGGTCGGATGGGCCATCTATCCACTTGGATACATGATGGGTAACGACATGATCCCTGGGTTCGGAGAAGGTGACATGAACATCATCTACAACCTTGCT FWIATAMMLATTVFFLVERQNVAAKWKTSMSVAALVTGIAWYHYTYMRQHWVDNGSSPIVYRYIDWLLTVPLQIAEFYLILAAIGVASVVMFRNLMIASIVMLVAGFFGETGAWEIFGDASTEIWWAIGMAGWIYIIYEIFKGSINDAAQQASESVQFAFNSMRWIVLVGWAIYPLGYMMGNDMIPGFGEGDMNIIYNLA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGGATTGCCACAGCAATGATGCTGGCCACGACCGTGTTCTTCTTGGTTGAGCGACAAAACGTTGCGGCC---AAGTGGAAGACATCAATGTCAGTCGCTGCCCTCGTGACAGGTATCGCATGGTACCACTACACCTACATGCGCCAGCACTGGGTG---------------------------------------------------GACAACGGATCCAGTCCAATCGTGTATCGATACATCGATTGG------------------------TTGCTCACAGTCCCACTGCAGATTGCTGAATTCTACCTCATCCTCGCTGCG---------ATT---GGTGTCGCTAGTGTC---GTGATG------------------------------------TTCCGCAAT---CTGATGATTGCCTCAATTGTGATGCTTGTTGCCGGGTTCTTCGGTGAA---------ACC------------------GGT------GCA---------------------------------TGG------GAAATC------TTCGGA---------GAC---------------------------GCGAGCACA------------------GAGATTTGG---TGGGCCATTGGAATGGCTGGATGGATTTACATCATCTACGAGATT---------------TTC------AAG---GGTTCAATCAACGAT---GCCGCTCAA------CAG---GCCAGTGAAAGCGTC---CAG---TTC---GCA---TTC---AAT---TCGATG---CGCTGGATTGTCTTGGTC---------------------------------------------------------------GGATGG---------GCCATCTATCCACTTGGATACATGATGGGTAACGACATG---ATCCCT---------GGG---TTCGGAGAAGGTGACATGAACATCATCTACAACCTTGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------------------------------------------FWIATAMMLATTVFFLVERQNVAA-KWKTSMSVAALVTGIAWYHYTYMRQHWV-----------------DNGSSPIVYRYIDW--------LLTVPLQIAEFYLILAA---I-GVASV-VM------------FRN-LMIASIVMLVAGFFGE---T------G--A-----------W--EI--FG---D---------AST------EIW-WAIGMAGWIYIIYEI-----F--K-GSIND-AAQ--Q-ASESV-Q-F-A-F-N-SM-RWIVLV---------------------GW---AIYPLGYMMGNDM-IP---G-FGEGDMNIIYNLA-------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ926163 [unk-euryarch-HF70_59C08] BOUM_OTU076_env_samples gb|KJ926163| Uncultured bacterium clone BOUM OTU076 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU076 putative proteorhodopsin gene, partial cds KJ926163 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 38.6308 7.9097 #na #na #na #na #na GTTGATTGGCTACTTACCGTCCCATTGCAAATCGCAGAATTTTACCTAATTTTGGCTGCAATCGGTGTGGCCAGCGTCGTCATGTTCCGCAACCTGATGGTCGCATCAATCGTAATGCTCGTTGCTGGATTCTTTGGGGAAACCGGCTCCTGGGAACTCTTCGGAGACTTGAGCACTGAAGTTTGGTGGGTCATTGGAATGGCTGGATGGGTCTACATCATCTACGAGATTTTCAAGGGTTCAATCAACGAAGCCGCTCAGAAGGCAAGCGAAAGCGTTCAGTTTGCGTTCAATTCAATGCGCTGGATCGTATTGGTTGGTTGGGCTATATAC VDWLLTVPLQIAEFYLILAAIGVASVVMFRNLMVASIVMLVAGFFGETGSWELFGDLSTEVWWVIGMAGWVYIIYEIFKGSINEAAQKASESVQFAFNSMRWIVLVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGATTGG------------------------CTACTTACCGTCCCATTGCAAATCGCAGAATTTTACCTAATTTTGGCTGCA---------ATC---GGTGTGGCCAGCGTC---GTCATG------------------------------------TTCCGCAAC---CTGATGGTCGCATCAATCGTAATGCTCGTTGCTGGATTCTTTGGGGAA---------ACC------------------GGC------TCC---------------------------------TGG------GAACTC------TTCGGA---------GAC---------------------------TTGAGCACT------------------GAAGTTTGG---TGGGTCATTGGAATGGCTGGATGGGTCTACATCATCTACGAGATT---------------TTC------AAG---GGTTCAATCAACGAA---GCCGCTCAG------AAG---GCAAGCGAAAGCGTT---CAG---TTT---GCG---TTC---AAT---TCAATG---CGCTGGATCGTATTGGTT---------------------------------------------------------------GGTTGG---------GCTATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LLTVPLQIAEFYLILAA---I-GVASV-VM------------FRN-LMVASIVMLVAGFFGE---T------G--S-----------W--EL--FG---D---------LST------EVW-WVIGMAGWVYIIYEI-----F--K-GSINE-AAQ--K-ASESV-Q-F-A-F-N-SM-RWIVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_DQ203847 [unk-euryarch-HF70_59C08] SS114a40H12_env_samples_DQ203847 gi|77548142|gb|DQ203847| Uncultured bacterium clone SS114a40H12 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40H12 predicted proteorhodopsin gene, partial cds DQ203847 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTACATTGATTGGCTGATTACTGTTCCCTTACAAATTATAGAATTTTATCTGATTCTGGCAGCAGTTACCCTAGTACCAGTCATTCTATTTTGGAAACTTCTTGGAGCCTCTTTATCAATGCTTATAGCCGGTTTTGCGGGTGAAGCCAGTTTATTTCCAGTGGTTCCAGCATTTATCGTTGGTATGGCTGCATGGATCTACATCATTTACGAGGTTTTCGCAGGTGAAGCCTCTAAGATCAGTGCAAATAGCAACAATAAAGGTGGCCAATTTGCCTTCAACGCACTCAGGATCATTTTAACAGCCGGCTGGGCCATCTATCCA RYIDWLITVPLQIIEFYLILAAVTLVPVILFWKLLGASLSMLIAGFAGEASLFPVVPAFIVGMAAWIYIIYEVFAGEASKISANSNNKGGQFAFNALRIILTAGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATTGATTGG------------------------CTGATTACTGTTCCCTTACAAATTATAGAATTTTATCTGATTCTGGCAGCA---------GTT---ACCCTAGTACCAGTC---ATTCTA------------------------------------TTTTGGAAA---CTTCTTGGAGCCTCTTTATCAATGCTTATAGCCGGTTTTGCGGGTGAA---------GCC------------------AGT------TTA---------------------------------TTT------------------------------------------------------------------CCAGTG------------------GTTCCAGCA---TTTATCGTTGGTATGGCTGCATGGATCTACATCATTTACGAGGTT---------------TTC------GCA---GGTGAAGCCTCTAAGATCAGTGCAAAT------AGC---AACAATAAAGGTGGC---CAA---TTT---GCC---TTC---AAC---GCACTC---AGGATCATTTTAACAGCC---------------------------------------------------------------GGCTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILAA---V-TLVPV-IL------------FWK-LLGASLSMLIAGFAGE---A------S--L-----------F----------------------PV------VPA-FIVGMAAWIYIIYEV-----F--A-GEASKISAN--S-NNKGG-Q-F-A-F-N-AL-RIILTA---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ926237 [unk-euryarch-HF70_59C08] RHOMEO_AG_OTU8 gb|KJ926237| Uncultured bacterium cloneRHOMEO AG OTU8 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU8 putative proteorhodopsin gene, partial cds KJ926237 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGTTTCTAACTGTACCGTTACAGATTGTTGAATTTTACTTTATTTTAGCAGCAGTTACAACGGTTACAGCGATGTTATTTTGGAGGCTTTTAGGATCTTCAGTTTTAATGCTTGTTTTTAGATTTCTTGGAGAAACTCAAATGATTGGAGGAAGTTCTATAGTTTGGTGGACTTTAGGAATGGTTTGTTGGTTTTATATTATTTACGAGATTTTTAGAGGCGAGGCCGCATTCCTCAATGAAAATAGCGGTAACGAATCTGGTCAGTTTGCATTTCAATCTTTAAAATGGATTGCAACTGTG WFLTVPLQIVEFYFILAAVTTVTAMLFWRLLGSSVLMLVFRFLGETQMIGGSSIVWWTLGMVCWFYIIYEIFRGEAAFLNENSGNESGQFAFQSLKWIATV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTTCTAACTGTACCGTTACAGATTGTTGAATTTTACTTTATTTTAGCAGCA---------GTT---ACAACGGTTACAGCG---ATGTTA------------------------------------TTTTGGAGG---CTTTTAGGATCTTCAGTTTTAATGCTTGTTTTTAGATTTCTTGGAGAA---------ACT------------------CAA------ATG---------------------------------ATT---------------------------------GGA---------------------------GGAAGTTCT------------------ATAGTTTGG---TGGACTTTAGGAATGGTTTGTTGGTTTTATATTATTTACGAGATT---------------TTT------AGA---GGCGAGGCCGCATTCCTCAATGAAAAT------AGC---GGTAACGAATCTGGT---CAG---TTT---GCA---TTT---CAA---TCTTTA---AAATGGATTGCAACTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------FLTVPLQIVEFYFILAA---V-TTVTA-ML------------FWR-LLGSSVLMLVFRFLGE---T------Q--M-----------I-----------G---------GSS------IVW-WTLGMVCWFYIIYEI-----F--R-GEAAFLNEN--S-GNESG-Q-F-A-F-Q-SL-KWIATV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_1105135565228 [unk-euryarch-HF70_59C08] JCVI_ORF_1105135565228_GS000c_Open_Ocean_5m jcvi|1105135565228| 1105135565228 JCVI ORF 1105135565228 1105135565228 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.22_0.8 other #na 25-FEB-2003 Open_Ocean/5m_depth/S_36.7_psu/GS000c/Sargasso_Stations_3/Sargasso_Sea Sargasso Sea marine 32.174835 -64.01017 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATTTTTTTGTTCTTTAGCTTAAAAAACACACTATTTTTAATCGTTTGCATTTTTACAGTATTTCTTTTGCCAACTTCCGCGGCAGTGGGCGATAGTTATTCTGAAGATGGTTTTCTGGTCCTTGGGCAAGATGATTTAGTAGGAATTTCTTTTTGGATTGCAACTGCAGCGATGTTAGCTTCAAGTCTCTTTTTTCTAATAGAACGTGCAAATGTTGCACCACAGTGGAAAACATCAATGACAATTGCTACATTGATTACAGGAATCGCATTTTGGCATTACATGTATATGAGAGAACATTGGATAATAACAGGCGAGAGTCCGATAGTCTATCGATATGTTGATTGGTTTTTGACCGTCCCATTACAAATTGTTGAATTTTACTTTATTCTAGCTGCAGTGACAACAGTTACAGCAATGTTATTTTGGAGACTTTTAGGCTCTTCAGTATTGATGCTTGTTTTTGGATTTCTCGGAGAAACTCAAATGATTGGAGGAAGTTCTATAGTTTGGTGGACATTAGGAATGATTTGTTGGTTTTACATTATCTATGAGATTTTTAGAGGAGAAGCAGCAATTTTCAATAAAAATAGTGGTAATGAAGCTGGGCAATTTGCATTTCAATCTTTAAAATGGATAGTTACGATAGGATGGGCAATTTATCCAATAGGATACTTGTATGGTTTAGAAGCGACTACAATACTGGGAGTAACAATTAGCAACACAGCATACAGTGTAGAAGCTATCAACATAATATATAATTTGGCAGATTTAGTTAACAAAACAGCATTTGGAGTTGCTATTTGGATTGCTGCTGTAAAGGATACTAAAGACTCAGAACGAACTTTCAAACCC IFLFFSLKNTLFLIVCIFTVFLLPTSAAVGDSYSEDGFLVLGQDDLVGISFWIATAAMLASSLFFLIERANVAPQWKTSMTIATLITGIAFWHYMYMREHWIITGESPIVYRYVDWFLTVPLQIVEFYFILAAVTTVTAMLFWRLLGSSVLMLVFGFLGETQMIGGSSIVWWTLGMICWFYIIYEIFRGEAAIFNKNSGNEAGQFAFQSLKWIVTIGWAIYPIGYLYGLEATTILGVTISNTAYSVEAINIIYNLADLVNKTAFGVAIWIAAVKDTKDSERTFKP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTTTTGTTCTTTAGCTTAAAAAACACACTATTTTTAATCGTTTGCATTTTTACAGTATTTCTTTTGCCAACTTCCGCGGCAGTGGGCGATAGTTATTCTGAAGATGGTTTTCTGGTCCTTGGGCAAGATGATTTAGTAGGAATTTCTTTTTGGATTGCAACTGCAGCGATGTTAGCTTCAAGTCTCTTTTTTCTAATAGAACGTGCAAATGTTGCACCA---CAGTGGAAAACATCAATGACAATTGCTACATTGATTACAGGAATCGCATTTTGGCATTACATGTATATGAGAGAACATTGGATA---------------------------------------------------ATAACAGGCGAGAGTCCGATAGTCTATCGATATGTTGATTGG------------------------TTTTTGACCGTCCCATTACAAATTGTTGAATTTTACTTTATTCTAGCTGCA---------GTG---ACAACAGTTACAGCA---ATGTTA------------------------------------TTTTGGAGA---CTTTTAGGCTCTTCAGTATTGATGCTTGTTTTTGGATTTCTCGGAGAA---------ACT------------------CAA------ATG---------------------------------ATT---------------------------------GGA---------------------------GGAAGTTCT------------------ATAGTTTGG---TGGACATTAGGAATGATTTGTTGGTTTTACATTATCTATGAGATT---------------TTT------AGA---GGAGAAGCAGCAATTTTCAATAAAAAT------AGT---GGTAATGAAGCTGGG---CAA---TTT---GCA---TTT---CAA---TCTTTA---AAATGGATAGTTACGATA---------------------------------------------------------------GGATGG---------GCAATTTATCCAATAGGATACTTGTATGGTTTAGAAGCGACTACAATA---------CTGGGAGTAACAATTAGCAACACAGCATACAGTGTAGAAGCTATCAACATAATATATAATTTGGCAGATTTAGTTAACAAAACAGCATTTGGAGTTGCTATTTGGATTGCTGCTGTAAAGGATACTAAAGACTCAGAACGAACTTTCAAACCC------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------IFLFFSLKNTLFLIVCIFTVFLLPTSAAVGDSYSEDGFLVLGQDDLVGISFWIATAAMLASSLFFLIERANVAP-QWKTSMTIATLITGIAFWHYMYMREHWI-----------------ITGESPIVYRYVDW--------FLTVPLQIVEFYFILAA---V-TTVTA-ML------------FWR-LLGSSVLMLVFGFLGE---T------Q--M-----------I-----------G---------GSS------IVW-WTLGMICWFYIIYEI-----F--R-GEAAIFNKN--S-GNEAG-Q-F-A-F-Q-SL-KWIVTI---------------------GW---AIYPIGYLYGLEATTI---LGVTISNTAYSVEAINIIYNLADLVNKTAFGVAIWIAAVKDTKDSERTFKP-------------------------------- [unk-euryarch-HF70_59C08]_1105102574784 [unk-euryarch-HF70_59C08] JCVI_ORF_1105102574784 jcvi|1105102574784| 1105102574784 JCVI ORF 1105102574784 1105102574784 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 09-janv-04 Open_Ocean/2m_depth/S_35.8_psu/GS017/Yucatan_Channel/Caribbean_Sea Caribbean Sea marine 20.5225 -85.41361 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAAATCTAAGTTAATTTTTCTAGGAATTTTTTCTCTTACAGCCCTAATTTTGCCTACCTCAATAGCTGCAGATGAAAGTTATTCTGAAGATGGTTTTTTAGTTCTTGGACAAGACGATTTAGTTGGAATTACTTTTTGGATTGCTACAGCTGCAATGCTTGCATCTAGTATTTTTTTCTTAATAGAAAGGGCTAATGTTGCACCTCAATGGAAAACATCGATGACAATTGCTTGTTTGATTACAGGAATTGCATTTTGGCATTACATGTACATGAGAGAGCATTGGATTCTAACTGGAGAAAGTCCTGTAGTATACCGATATGTTGATTGGTTTTTGACAGTTCCATTACAAATAGTTGAATTTTATTTTATTTTAGCAGCAGTCACTACAGTCACAGCCATGTTATTCTGGAGACTTCTAATTTCATCCACATTGATGTTGGTGTTTGGATTTTTGGGAGAAACTCAAATGATTGGAGGCAGTTCCATTATTTGGTGGATTCTTGGGATGATTTGTTGGATTTATATAATATATGAGATTTTCAGAGGTGAAGCTGCCATGATCAATAAAAAAAGTGGCAATGAGGCCGGCCAGTTTGCATTCCAAACCTTAAAGTGGATTGTAACAATAGGATGGGCAATCTATCCAATCGGATACCTATATGGTTTAGATGAAACAATATGTGCCACAAACCGT MKSKLIFLGIFSLTALILPTSIAADESYSEDGFLVLGQDDLVGITFWIATAAMLASSIFFLIERANVAPQWKTSMTIACLITGIAFWHYMYMREHWILTGESPVVYRYVDWFLTVPLQIVEFYFILAAVTTVTAMLFWRLLISSTLMLVFGFLGETQMIGGSSIIWWILGMICWIYIIYEIFRGEAAMINKKSGNEAGQFAFQTLKWIVTIGWAIYPIGYLYGLDETICATNR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAATCTAAGTTAATTTTTCTAGGAATTTTTTCTCTTACAGCCCTAATTTTGCCTACCTCAATAGCTGCAGATGAAAGTTATTCTGAAGATGGTTTTTTAGTTCTTGGACAAGACGATTTAGTTGGAATTACTTTTTGGATTGCTACAGCTGCAATGCTTGCATCTAGTATTTTTTTCTTAATAGAAAGGGCTAATGTTGCACCT---CAATGGAAAACATCGATGACAATTGCTTGTTTGATTACAGGAATTGCATTTTGGCATTACATGTACATGAGAGAGCATTGGATT---------------------------------------------------CTAACTGGAGAAAGTCCTGTAGTATACCGATATGTTGATTGG------------------------TTTTTGACAGTTCCATTACAAATAGTTGAATTTTATTTTATTTTAGCAGCA---------GTC---ACTACAGTCACAGCC---ATGTTA------------------------------------TTCTGGAGA---CTTCTAATTTCATCCACATTGATGTTGGTGTTTGGATTTTTGGGAGAA---------ACT------------------CAA------ATG---------------------------------ATT---------------------------------GGA---------------------------GGCAGTTCC------------------ATTATTTGG---TGGATTCTTGGGATGATTTGTTGGATTTATATAATATATGAGATT---------------TTC------AGA---GGTGAAGCTGCCATGATCAATAAAAAA------AGT---GGCAATGAGGCCGGC---CAG---TTT---GCA---TTC---CAA---ACCTTA---AAGTGGATTGTAACAATA---------------------------------------------------------------GGATGG---------GCAATCTATCCAATCGGATACCTATATGGTTTAGATGAA---ACAATA---------TGT---GCCACAAACCGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------MKSKLIFLGIFSLTALILPTSIAADESYSEDGFLVLGQDDLVGITFWIATAAMLASSIFFLIERANVAP-QWKTSMTIACLITGIAFWHYMYMREHWI-----------------LTGESPVVYRYVDW--------FLTVPLQIVEFYFILAA---V-TTVTA-ML------------FWR-LLISSTLMLVFGFLGE---T------Q--M-----------I-----------G---------GSS------IIW-WILGMICWIYIIYEI-----F--R-GEAAMINKK--S-GNEAG-Q-F-A-F-Q-TL-KWIVTI---------------------GW---AIYPIGYLYGLDE-TI---C-ATNR----------------------------------------------------------------------------- [unk-euryarch-a]_KJ926236 [unk-euryarch-a] RHOMEO_AG_OTU7 gb|KJ926236| Uncultured bacterium cloneRHOMEO AG OTU7 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU7 putative proteorhodopsin gene, partial cds KJ926236 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGCTTATTACTGTTCCACTTCAAATAGTTGAGTTTTATTTAATTCTTGCGGCTGTAACAGCAGTAACAAGTATTTTATTCTGGCGATTATTGGGCGCGTCATTAGTGATGCTCGTTTTTGGTTTCTTAGGAGAAGCAGGTCTAATGGATGCTACCATCGGTTTTGTAATCGGAATGGCTGGTTGGATATATATTATCTATGAGATTTTTGCAGGGGAAGCTGCAAAGCTAAGTGAAAACAGTAAAAATCCAGGCGGTCAATTTGCTTTCAATACGTTGAGATTGATTGTTACTGTT WLITVPLQIVEFYLILAAVTAVTSILFWRLLGASLVMLVFGFLGEAGLMDATIGFVIGMAGWIYIIYEIFAGEAAKLSENSKNPGGQFAFNTLRLIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTTATTACTGTTCCACTTCAAATAGTTGAGTTTTATTTAATTCTTGCGGCT---------GTA---ACAGCAGTAACAAGT---ATTTTA------------------------------------TTCTGGCGA---TTATTGGGCGCGTCATTAGTGATGCTCGTTTTTGGTTTCTTAGGAGAA---------GCA------------------GGT------CTA---------------------------------ATG------------------------------------------------------------------GATGCT------------------ACCATCGGT---TTTGTAATCGGAATGGCTGGTTGGATATATATTATCTATGAGATT---------------TTT------GCA---GGGGAAGCTGCAAAGCTAAGTGAAAAC------AGT---AAAAATCCAGGCGGT---CAA---TTT---GCT---TTC---AAT---ACGTTG---AGATTGATTGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLQIVEFYLILAA---V-TAVTS-IL------------FWR-LLGASLVMLVFGFLGE---A------G--L-----------M----------------------DA------TIG-FVIGMAGWIYIIYEI-----F--A-GEAAKLSEN--S-KNPGG-Q-F-A-F-N-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_FJ560867 [unk-euryarch-a] HEL161_env_samples_FJ560867 gi|223868881|gb|FJ560867| Uncultured microorganism clone HEL161 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL161 putative proteorhodopsin gene, partial cds FJ560867 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTGCCGCTTCAGATAGTTGAGTTTTATTTAATTCTTGCGGCTGTTACGGCAGTAACAAGTGGTCTGTTCTGGCGACTATTGGGTGCTTCATTAGTCATGCTCATTTTTGGTTTTCTTGGAGAAGCAGGTATTATGAATGCCACAATAGGCTTTGTAATTGGAATGGCCGGTTGGATATACATTATCTATGAAATTTTTGCTGGGGAAGCTGCAAAGCTTAGTGAGAACAGTAAAAATGCAGGTGGTCAATTTGCGTTT TVPLQIVEFYLILAAVTAVTSGLFWRLLGASLVMLIFGFLGEAGIMNATIGFVIGMAGWIYIIYEIFAGEAAKLSENSKNAGGQFAF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTGCCGCTTCAGATAGTTGAGTTTTATTTAATTCTTGCGGCT---------GTT---ACGGCAGTAACAAGT---GGTCTG------------------------------------TTCTGGCGA---CTATTGGGTGCTTCATTAGTCATGCTCATTTTTGGTTTTCTTGGAGAA---------GCA------------------GGT------ATT---------------------------------ATG------------------------------------------------------------------AATGCC------------------ACAATAGGC---TTTGTAATTGGAATGGCCGGTTGGATATACATTATCTATGAAATT---------------TTT------GCT---GGGGAAGCTGCAAAGCTTAGTGAGAAC------AGT---AAAAATGCAGGTGGT---CAA---TTT---GCG---TTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLQIVEFYLILAA---V-TAVTS-GL------------FWR-LLGASLVMLIFGFLGE---A------G--I-----------M----------------------NA------TIG-FVIGMAGWIYIIYEI-----F--A-GEAAKLSEN--S-KNAGG-Q-F-A-F-------------------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_FJ560790 [unk-euryarch-a] HEL60_env_samples_FJ560790 gi|223868727|gb|FJ560790| Uncultured microorganism clone HEL60 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL60 putative proteorhodopsin gene, partial cds FJ560790 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTGCCGCTTCAGATAGTTGAGTTTTATTTAATTCTTGCGGCTGTTACGGCAGTAACAAGTGGTCTGTTCTGGCGACTATTGGGTGCTTCATTAGTCATGCTCATTTTTGGTTTTCTTGGAGAAGCAGGTATTATGAATGCCACAATAGGCTTTGTAATTGGAATGGCCGGTTGGATATACATTATCTATGAAATTTTTGCTGGGGAAGCTGCAAAGCTTAGTGAGAACAGTAAAAATGCAGGTGGTCAATTTGCTTTTAATACCTTGAGATTA TVPLQIVEFYLILAAVTAVTSGLFWRLLGASLVMLIFGFLGEAGIMNATIGFVIGMAGWIYIIYEIFAGEAAKLSENSKNAGGQFAFNTLRL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTGCCGCTTCAGATAGTTGAGTTTTATTTAATTCTTGCGGCT---------GTT---ACGGCAGTAACAAGT---GGTCTG------------------------------------TTCTGGCGA---CTATTGGGTGCTTCATTAGTCATGCTCATTTTTGGTTTTCTTGGAGAA---------GCA------------------GGT------ATT---------------------------------ATG------------------------------------------------------------------AATGCC------------------ACAATAGGC---TTTGTAATTGGAATGGCCGGTTGGATATACATTATCTATGAAATT---------------TTT------GCT---GGGGAAGCTGCAAAGCTTAGTGAGAAC------AGT---AAAAATGCAGGTGGT---CAA---TTT---GCT---TTT---AAT---ACCTTG---AGATTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLQIVEFYLILAA---V-TAVTS-GL------------FWR-LLGASLVMLIFGFLGE---A------G--I-----------M----------------------NA------TIG-FVIGMAGWIYIIYEI-----F--A-GEAAKLSEN--S-KNAGG-Q-F-A-F-N-TL-RL------------------------------------------------------------------------------------------------------------------------------------ [unk-euryarch-a]_FJ560813 [unk-euryarch-a] HEL91_env_samples_FJ560813 gi|223868773|gb|FJ560813| Uncultured microorganism clone HEL91 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL91 putative proteorhodopsin gene, partial cds FJ560813 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTGCCGCTTCAGATAGTTGAATTTTATTTAATTCTTGCGGCTGTTACGGCAGTATCAAGTATTCTGTTCTGGCGACTATTGGGTGCTTCATTAGTCATGCTCATTTTTGGTTTTCTTGGAGAAGCAGGTATTATGAATGCCACAATAGGCTTTGTAATTGGAATGGCCGGTTGGATATACATTATCTATGAAATTTTTGCTGGGGAAGCTGCAAAGCTTAGTGAGAACAGTAAAAATGCAGGTGGTCAATTTGCTTTTAATACCTTGAGATTA TVPLQIVEFYLILAAVTAVSSILFWRLLGASLVMLIFGFLGEAGIMNATIGFVIGMAGWIYIIYEIFAGEAAKLSENSKNAGGQFAFNTLRL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTGCCGCTTCAGATAGTTGAATTTTATTTAATTCTTGCGGCT---------GTT---ACGGCAGTATCAAGT---ATTCTG------------------------------------TTCTGGCGA---CTATTGGGTGCTTCATTAGTCATGCTCATTTTTGGTTTTCTTGGAGAA---------GCA------------------GGT------ATT---------------------------------ATG------------------------------------------------------------------AATGCC------------------ACAATAGGC---TTTGTAATTGGAATGGCCGGTTGGATATACATTATCTATGAAATT---------------TTT------GCT---GGGGAAGCTGCAAAGCTTAGTGAGAAC------AGT---AAAAATGCAGGTGGT---CAA---TTT---GCT---TTT---AAT---ACCTTG---AGATTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLQIVEFYLILAA---V-TAVSS-IL------------FWR-LLGASLVMLIFGFLGE---A------G--I-----------M----------------------NA------TIG-FVIGMAGWIYIIYEI-----F--A-GEAAKLSEN--S-KNAGG-Q-F-A-F-N-TL-RL------------------------------------------------------------------------------------------------------------------------------------ [unk-euryarch-a]_DQ203646 [unk-euryarch-a] medHO120G4_env_samples_DQ203646 gi|77547740|gb|DQ203646| Uncultured bacterium clone medHO120G4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120G4 predicted proteorhodopsin gene, partial cds DQ203646 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTATATTGATTGGCTGATTACTGTACCACTACAAATAGTTGAATTTTATCTTATCCTTGCGGCCGTAACTGCTGTAACAAGCGTATTATTTTGGCGTCTTCTAGGTGCATCGCTTGTAATGTTAGTTTTTGGGTTCTTAGGTGAAGCAGGTATCGTTGATGCCACTGTTGGGTTTGTTCTAGGAATGGCTGGCTGGTTATACATCATATATGAAATCTTCGCAGGTGAAGCAGCAAAATTAAGTGAAAACAGCAACAACGCTGGCGGTCAGTTTGCATTCAATACCCTAAGGTTAATTGTAACAGTTGGTTGGGCCATATACCCA RYIDWLITVPLQIVEFYLILAAVTAVTSVLFWRLLGASLVMLVFGFLGEAGIVDATVGFVLGMAGWLYIIYEIFAGEAAKLSENSNNAGGQFAFNTLRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTATATTGATTGG------------------------CTGATTACTGTACCACTACAAATAGTTGAATTTTATCTTATCCTTGCGGCC---------GTA---ACTGCTGTAACAAGC---GTATTA------------------------------------TTTTGGCGT---CTTCTAGGTGCATCGCTTGTAATGTTAGTTTTTGGGTTCTTAGGTGAA---------GCA------------------GGT------ATC---------------------------------GTT------------------------------------------------------------------GATGCC------------------ACTGTTGGG---TTTGTTCTAGGAATGGCTGGCTGGTTATACATCATATATGAAATC---------------TTC------GCA---GGTGAAGCAGCAAAATTAAGTGAAAAC------AGC---AACAACGCTGGCGGT---CAG---TTT---GCA---TTC---AAT---ACCCTA---AGGTTAATTGTAACAGTT---------------------------------------------------------------GGTTGG---------GCCATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TAVTS-VL------------FWR-LLGASLVMLVFGFLGE---A------G--I-----------V----------------------DA------TVG-FVLGMAGWLYIIYEI-----F--A-GEAAKLSEN--S-NNAGG-Q-F-A-F-N-TL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ926106 [unk-euryarch-a] BOUM_OTU019_env_samples gb|KJ926106| Uncultured bacterium clone BOUM OTU019 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU019 putative proteorhodopsin gene, partial cds KJ926106 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 38.96217 14.32367 #na #na #na #na #na GTCGATTGGTTAATTACTGTTCCTCTACAAATAGTGGAATTTTACCTGATTCTTGCAGCTGTAACCGCTGTAACTAGTGTGTTATTTTGGCGTCTTTTAGGTGCATCTCTTGTAATGCTAGTTTTCGGTTTCCTAGGTGAAGCTGGTCTTATTGATGCTACTATTGGGTTTGTTCTAGGGATGGCTGGCTGGTTATACATCATATATGAAATTTTCGCAGGTGAAGCAGCAAAGTTAAGTGAAAATAGTAACAACGCAGGAGGTCAGTTTGCCTTTAATACTCTTAGGTTAATAGTAACTGTTGGCTGGGCCATCTAT VDWLITVPLQIVEFYLILAAVTAVTSVLFWRLLGASLVMLVFGFLGEAGLIDATIGFVLGMAGWLYIIYEIFAGEAAKLSENSNNAGGQFAFNTLRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCGATTGG------------------------TTAATTACTGTTCCTCTACAAATAGTGGAATTTTACCTGATTCTTGCAGCT---------GTA---ACCGCTGTAACTAGT---GTGTTA------------------------------------TTTTGGCGT---CTTTTAGGTGCATCTCTTGTAATGCTAGTTTTCGGTTTCCTAGGTGAA---------GCT------------------GGT------CTT---------------------------------ATT------------------------------------------------------------------GATGCT------------------ACTATTGGG---TTTGTTCTAGGGATGGCTGGCTGGTTATACATCATATATGAAATT---------------TTC------GCA---GGTGAAGCAGCAAAGTTAAGTGAAAAT------AGT---AACAACGCAGGAGGT---CAG---TTT---GCC---TTT---AAT---ACTCTT---AGGTTAATAGTAACTGTT---------------------------------------------------------------GGCTGG---------GCCATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPLQIVEFYLILAA---V-TAVTS-VL------------FWR-LLGASLVMLVFGFLGE---A------G--L-----------I----------------------DA------TIG-FVLGMAGWLYIIYEI-----F--A-GEAAKLSEN--S-NNAGG-Q-F-A-F-N-TL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-euryarch-a]_DQ422378 [unk-euryarch-a] clone_med-50m-c10_DQ422378 gi|90024276|gb|DQ422378| Uncultured bacterium clone med-50m-c10 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-c10 putative proteorhodopsin gene, partial cds. DQ422378 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAGTGACTGTACCATTACAGATAGTGGAGTTTTACCTGATTCTAGCAGCTGTAACAGCTGTAACAAGCATTTTGTTCTGGAGATTATTGGGTGCCTCGCTAGTAATGTTGGTATTTGGTTACTTAGGTGAAGCTGGATTGATGGATGTTACTGTTGGTTTTATCATTGGTATGGCTGGCTGGATTTACATCATTTATGAGATTTTTGCTGGAGAAGCTACGAAGTTAAGCGAGGGTAGTAAAAATGCTGGTGGTCAGTTTGCGTTCAATACGCTCAGGTACATTGTAACTATTGGTTGGGCTATTTATCCA RYIDWLVTVPLQIVEFYLILAAVTAVTSILFWRLLGASLVMLVFGYLGEAGLMDVTVGFIIGMAGWIYIIYEIFAGEATKLSEGSKNAGGQFAFNTLRYIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAGTGACTGTACCATTACAGATAGTGGAGTTTTACCTGATTCTAGCAGCT---------GTA---ACAGCTGTAACAAGC---ATTTTG------------------------------------TTCTGGAGA---TTATTGGGTGCCTCGCTAGTAATGTTGGTATTTGGTTACTTAGGTGAA---------GCT------------------GGA------TTG---------------------------------ATG------------------------------------------------------------------GATGTT------------------ACTGTTGGT---TTTATCATTGGTATGGCTGGCTGGATTTACATCATTTATGAGATT---------------TTT------GCT---GGAGAAGCTACGAAGTTAAGCGAGGGT------AGT---AAAAATGCTGGTGGT---CAG---TTT---GCG---TTC---AAT---ACGCTC---AGGTACATTGTAACTATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LVTVPLQIVEFYLILAA---V-TAVTS-IL------------FWR-LLGASLVMLVFGYLGE---A------G--L-----------M----------------------DV------TVG-FIIGMAGWIYIIYEI-----F--A-GEATKLSEG--S-KNAGG-Q-F-A-F-N-TL-RYIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-a]_DQ422415 [unk-euryarch-a] clone_med-50m-f12_DQ422415 gi|90024350|gb|DQ422415| Uncultured bacterium clone med-50m-f12 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-f12 putative proteorhodopsin gene, partial cds. DQ422415 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAGTGACTGTACCATTACAGATAGTGGAGTTTTACCTGATTCTAGCAGCTGTAACAGCTGTAACAAGCATTTTGTTCTGGAGATTATTGGGTGCCTCGCTAGTAATGTTGGTATTTGGTTACTTAGGTGAAGCTGGATTGATGGATGTTACTGTTGGTTTTATCATTGGTATGGCTGGCTGGATTTACATCATTTATGAGATTTTTGCTGGAGAAGCTGCGAAGTTAAGCGAGGGTAGTAAAAATGCTGGTGGTCAGTTTGCGTTCAATACGCTCAGGTACATTGTAACTATTGGTTGGGCTATTTATCCA RYIDWLVTVPLQIVEFYLILAAVTAVTSILFWRLLGASLVMLVFGYLGEAGLMDVTVGFIIGMAGWIYIIYEIFAGEAAKLSEGSKNAGGQFAFNTLRYIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAGTGACTGTACCATTACAGATAGTGGAGTTTTACCTGATTCTAGCAGCT---------GTA---ACAGCTGTAACAAGC---ATTTTG------------------------------------TTCTGGAGA---TTATTGGGTGCCTCGCTAGTAATGTTGGTATTTGGTTACTTAGGTGAA---------GCT------------------GGA------TTG---------------------------------ATG------------------------------------------------------------------GATGTT------------------ACTGTTGGT---TTTATCATTGGTATGGCTGGCTGGATTTACATCATTTATGAGATT---------------TTT------GCT---GGAGAAGCTGCGAAGTTAAGCGAGGGT------AGT---AAAAATGCTGGTGGT---CAG---TTT---GCG---TTC---AAT---ACGCTC---AGGTACATTGTAACTATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LVTVPLQIVEFYLILAA---V-TAVTS-IL------------FWR-LLGASLVMLVFGYLGE---A------G--L-----------M----------------------DV------TVG-FIIGMAGWIYIIYEI-----F--A-GEAAKLSEG--S-KNAGG-Q-F-A-F-N-TL-RYIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-a]_DQ422248 [unk-euryarch-a] clone_20-7_DQ422248 gi|90024016|gb|DQ422248| Uncultured bacterium clone 20-7 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 20-7 putative proteorhodopsin gene, partial cds. DQ422248 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAGTGACTGTACCATTACAGATAGTGGAGTTTTACCTGATTCTAGCAGCTGTAACAGCTGTAACAAGCATTTTGTTCTGGAGATTATTGGGTGCCTCGCTAGTAATGTTGGTATTTGGTTACTTAGGTGAAGCTGGATTGATGGATGTTACTGTTGGTTTTATCATTGGTATGGCTGGCTGGATTTACATCATTTATGAGATTTTTGCTGGAGAAGCTGCGAAGTTAAGCGAGGGTAGTAAAAATGCTGGTGGTCAGTTTGCGTTCAATACGCTCAGGTACATTGTAACTATTGGTTGGGCTATTTATCCA RYIDWLVTVPLQIVEFYLILAAVTAVTSILFWRLLGASLVMLVFGYLGEAGLMDVTVGFIIGMAGWIYIIYEIFAGEAAKLSEGSKNAGGQFAFNTLRYIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAGTGACTGTACCATTACAGATAGTGGAGTTTTACCTGATTCTAGCAGCT---------GTA---ACAGCTGTAACAAGC---ATTTTG------------------------------------TTCTGGAGA---TTATTGGGTGCCTCGCTAGTAATGTTGGTATTTGGTTACTTAGGTGAA---------GCT------------------GGA------TTG---------------------------------ATG------------------------------------------------------------------GATGTT------------------ACTGTTGGT---TTTATCATTGGTATGGCTGGCTGGATTTACATCATTTATGAGATT---------------TTT------GCT---GGAGAAGCTGCGAAGTTAAGCGAGGGT------AGT---AAAAATGCTGGTGGT---CAG---TTT---GCG---TTC---AAT---ACGCTC---AGGTACATTGTAACTATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LVTVPLQIVEFYLILAA---V-TAVTS-IL------------FWR-LLGASLVMLVFGYLGE---A------G--L-----------M----------------------DV------TVG-FIIGMAGWIYIIYEI-----F--A-GEAAKLSEG--S-KNAGG-Q-F-A-F-N-TL-RYIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-a]_DQ422418 [unk-euryarch-a] clone_med-50m-f4_DQ422418 gi|90024356|gb|DQ422418| Uncultured bacterium clone med-50m-f4 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-f4 putative proteorhodopsin gene, partial cds. DQ422418 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAGTGACTGTACCATTACAGATAGTGGAGTTTTACCTGATTCTAGCAGCTGTAACAGCTGTAACAAGCATTTTGTTCTGGAGATTATTGGGTGCCTCGCTAGTAATGTTGGTATTTGGTTACTTAGGTGAAGCTGGATTGATGGATGTTACTGTTGGTTTTATCATTGGTATGGCTGGCTGGATTTACATCATTTATGAGATTTTTGCTGGAGAAGCTGCGAAGTTAAGCGAGGGTAGTAAAAATGCTGGTGGTCAGTTTGCGTTCAATACGCTCAGGTACATTGTAACTATTGGTTGGGCTATTTATCCA RYIDWLVTVPLQIVEFYLILAAVTAVTSILFWRLLGASLVMLVFGYLGEAGLMDVTVGFIIGMAGWIYIIYEIFAGEAAKLSEGSKNAGGQFAFNTLRYIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAGTGACTGTACCATTACAGATAGTGGAGTTTTACCTGATTCTAGCAGCT---------GTA---ACAGCTGTAACAAGC---ATTTTG------------------------------------TTCTGGAGA---TTATTGGGTGCCTCGCTAGTAATGTTGGTATTTGGTTACTTAGGTGAA---------GCT------------------GGA------TTG---------------------------------ATG------------------------------------------------------------------GATGTT------------------ACTGTTGGT---TTTATCATTGGTATGGCTGGCTGGATTTACATCATTTATGAGATT---------------TTT------GCT---GGAGAAGCTGCGAAGTTAAGCGAGGGT------AGT---AAAAATGCTGGTGGT---CAG---TTT---GCG---TTC---AAT---ACGCTC---AGGTACATTGTAACTATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LVTVPLQIVEFYLILAA---V-TAVTS-IL------------FWR-LLGASLVMLVFGYLGE---A------G--L-----------M----------------------DV------TVG-FIIGMAGWIYIIYEI-----F--A-GEAAKLSEG--S-KNAGG-Q-F-A-F-N-TL-RYIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-a]_DQ422304 [unk-euryarch-a] clone_med-20m-e5_DQ422304 gi|90024128|gb|DQ422304| Uncultured bacterium clone med-20m-e5 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-e5 putative proteorhodopsin gene, partial cds. DQ422304 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAGTGACTGTACCATTACAGATAGTGGAGTTTTACCTGATTCTAGCAGCTGTAACAGCTGTAACAAGCATTTTGTTCTGGAGATTATTGGGTGCCTCGCTAGTAATGTTGGTATTTGGTTACTTAGGTGAAGCTGGATTGATGGATGTTACTGTTGGTTTTATCATTGGTATGGCTGGCTGGATTTACATCATTTATGAGATTTTTGCTGGAGAAGCTGCGAAGTTAAGCGAGGGTAGTAAAAATGCTGGTGGTCAGTTTGCGTTCAATACGCTCAGGTACATTGTAACTATTGGTTGGGCTATTTATCCA RYIDWLVTVPLQIVEFYLILAAVTAVTSILFWRLLGASLVMLVFGYLGEAGLMDVTVGFIIGMAGWIYIIYEIFAGEAAKLSEGSKNAGGQFAFNTLRYIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAGTGACTGTACCATTACAGATAGTGGAGTTTTACCTGATTCTAGCAGCT---------GTA---ACAGCTGTAACAAGC---ATTTTG------------------------------------TTCTGGAGA---TTATTGGGTGCCTCGCTAGTAATGTTGGTATTTGGTTACTTAGGTGAA---------GCT------------------GGA------TTG---------------------------------ATG------------------------------------------------------------------GATGTT------------------ACTGTTGGT---TTTATCATTGGTATGGCTGGCTGGATTTACATCATTTATGAGATT---------------TTT------GCT---GGAGAAGCTGCGAAGTTAAGCGAGGGT------AGT---AAAAATGCTGGTGGT---CAG---TTT---GCG---TTC---AAT---ACGCTC---AGGTACATTGTAACTATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LVTVPLQIVEFYLILAA---V-TAVTS-IL------------FWR-LLGASLVMLVFGYLGE---A------G--L-----------M----------------------DV------TVG-FIIGMAGWIYIIYEI-----F--A-GEAAKLSEG--S-KNAGG-Q-F-A-F-N-TL-RYIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-a]_DQ422389 [unk-euryarch-a] clone_med-50m-d1_DQ422389 gi|90024298|gb|DQ422389| Uncultured bacterium clone med-50m-d1 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-d1 putative proteorhodopsin gene, partial cds. DQ422389 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAGTGACTGTACCATTACAGATAGTGGAGTTTTACCTGATTCTAGCAGCTGTAACAGCTGTAACAAGCATTTTGTTCTGGAGATTATTGGGTGCCTCGCTAGTAATGTTGGTATTTGGTTACTTAGGTGAAGCTGGATTGATGGATGTTACTGTTGGTTTTATCATTGGTATGGCTGGCTGGATTTACATCATTTATGAGATTTTTGCTGGAGAAGCTGCGAAGTTAAGCGAGGGTAGTAAAAATGCTGGTGGTCAGTTTGCGTTCAATACGCTCAGGTACATTGTAACTATTGGTTGGGCTATTTATCCA RYIDWLVTVPLQIVEFYLILAAVTAVTSILFWRLLGASLVMLVFGYLGEAGLMDVTVGFIIGMAGWIYIIYEIFAGEAAKLSEGSKNAGGQFAFNTLRYIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAGTGACTGTACCATTACAGATAGTGGAGTTTTACCTGATTCTAGCAGCT---------GTA---ACAGCTGTAACAAGC---ATTTTG------------------------------------TTCTGGAGA---TTATTGGGTGCCTCGCTAGTAATGTTGGTATTTGGTTACTTAGGTGAA---------GCT------------------GGA------TTG---------------------------------ATG------------------------------------------------------------------GATGTT------------------ACTGTTGGT---TTTATCATTGGTATGGCTGGCTGGATTTACATCATTTATGAGATT---------------TTT------GCT---GGAGAAGCTGCGAAGTTAAGCGAGGGT------AGT---AAAAATGCTGGTGGT---CAG---TTT---GCG---TTC---AAT---ACGCTC---AGGTACATTGTAACTATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LVTVPLQIVEFYLILAA---V-TAVTS-IL------------FWR-LLGASLVMLVFGYLGE---A------G--L-----------M----------------------DV------TVG-FIIGMAGWIYIIYEI-----F--A-GEAAKLSEG--S-KNAGG-Q-F-A-F-N-TL-RYIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-a]_DQ422239 [unk-euryarch-a] clone_med-0m-h6_DQ422239 gi|90023998|gb|DQ422239| Uncultured bacterium clone med-0m-h6 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-h6 putative proteorhodopsin gene, partial cds. DQ422239 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATATATTGACTGGCTAGTGACTGTACCATTACAGATAGTGGAGTTTTACCTGATTCTAGCAGCTGTAACAGCTGTAACAAGCATTTTGTTCTGGAGATTATTGGGTGCCTCGCTAGTAATGTTGGTATTTGGTTACTTAGGTGAAGCTGGATTGATGGATGTTACTGTTGGTTTTATCATTGGTATGGCTGGCTGGATTTACATCATTTATGAGATTTTTGCTGGAGAAGCTGCGAAGTTAAGCGAGGGTAGTAAAAATGCTGGTGGTCAGTTTGCGTTCAATACGCTCAGGTACATTGTAACTATTGGTTGGGCTATTTATCCA RYIDWLVTVPLQIVEFYLILAAVTAVTSILFWRLLGASLVMLVFGYLGEAGLMDVTVGFIIGMAGWIYIIYEIFAGEAAKLSEGSKNAGGQFAFNTLRYIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGACTGG------------------------CTAGTGACTGTACCATTACAGATAGTGGAGTTTTACCTGATTCTAGCAGCT---------GTA---ACAGCTGTAACAAGC---ATTTTG------------------------------------TTCTGGAGA---TTATTGGGTGCCTCGCTAGTAATGTTGGTATTTGGTTACTTAGGTGAA---------GCT------------------GGA------TTG---------------------------------ATG------------------------------------------------------------------GATGTT------------------ACTGTTGGT---TTTATCATTGGTATGGCTGGCTGGATTTACATCATTTATGAGATT---------------TTT------GCT---GGAGAAGCTGCGAAGTTAAGCGAGGGT------AGT---AAAAATGCTGGTGGT---CAG---TTT---GCG---TTC---AAT---ACGCTC---AGGTACATTGTAACTATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LVTVPLQIVEFYLILAA---V-TAVTS-IL------------FWR-LLGASLVMLVFGYLGE---A------G--L-----------M----------------------DV------TVG-FIIGMAGWIYIIYEI-----F--A-GEAAKLSEG--S-KNAGG-Q-F-A-F-N-TL-RYIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-a]_DQ422207 [unk-euryarch-a] clone_med-0m-e9_DQ422207 gi|90023934|gb|DQ422207| Uncultured bacterium clone med-0m-e9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-e9 putative proteorhodopsin gene, partial cds. DQ422207 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGGTACATTGACTGGCTAGTGACTGTACCATTACAGATAGTGGAGTTTTACCTGATTCTAGCAGCTGTAACAGCTGTAACAAGCATTTTGTTCTGGAGATTATTGGGTGCCTCGCTAGTAATGTTGGTATTTGGTTACTTAGGTGAAGCTGGATTGATGGATGTTACTGTTGGTTTTATCATTGGTATGGCTGGCTGGATTTACATCATTTATGAGATTTTTGCTGGAGAAGCTGCGAAGTTAAGCGAGGGTAGTAAAAATGCTGGTGGTCAGTTTGCGTTCAATACGCTCAGGTACATTGTAACTATTGGTTGGGCCATTTACCCA RYIDWLVTVPLQIVEFYLILAAVTAVTSILFWRLLGASLVMLVFGYLGEAGLMDVTVGFIIGMAGWIYIIYEIFAGEAAKLSEGSKNAGGQFAFNTLRYIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATTGACTGG------------------------CTAGTGACTGTACCATTACAGATAGTGGAGTTTTACCTGATTCTAGCAGCT---------GTA---ACAGCTGTAACAAGC---ATTTTG------------------------------------TTCTGGAGA---TTATTGGGTGCCTCGCTAGTAATGTTGGTATTTGGTTACTTAGGTGAA---------GCT------------------GGA------TTG---------------------------------ATG------------------------------------------------------------------GATGTT------------------ACTGTTGGT---TTTATCATTGGTATGGCTGGCTGGATTTACATCATTTATGAGATT---------------TTT------GCT---GGAGAAGCTGCGAAGTTAAGCGAGGGT------AGT---AAAAATGCTGGTGGT---CAG---TTT---GCG---TTC---AAT---ACGCTC---AGGTACATTGTAACTATT---------------------------------------------------------------GGTTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LVTVPLQIVEFYLILAA---V-TAVTS-IL------------FWR-LLGASLVMLVFGYLGE---A------G--L-----------M----------------------DV------TVG-FIIGMAGWIYIIYEI-----F--A-GEAAKLSEG--S-KNAGG-Q-F-A-F-N-TL-RYIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-a]_DQ203508 [unk-euryarch-a] MedHO1202B3_env_samples_DQ203508 gi|77547464|gb|DQ203508| Uncultured bacterium clone MedHO1202B3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202B3 predicted proteorhodopsin gene, partial cds DQ203508 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGACTGGCTAGTGACTGTTCCATTACAGATAGTGGAGTTCTACTTGATTCTAGCAGCTGTAACAGCTGTAACAAGCATGCTATTCTGGAGATTATTGGGTGCCTCACTAGTAATGTTGGTATTCGGTTACTTAGGTGAAGCTGGATTGATGGATGTTACAGTTGGTTTTATCGTTGGTATGGCTGGCTGGATTTACATCATTTATGAGATCTTTGCTGGAGAAGCTGCGAAATTAAGCGAAGGTAGCAAAAATGCCGGTGGTCAATTTGCGTTTAACACGCTTAGATATATTGTAACCATTGGTTGGGCCATTTACCCA RYIDWLVTVPLQIVEFYLILAAVTAVTSMLFWRLLGASLVMLVFGYLGEAGLMDVTVGFIVGMAGWIYIIYEIFAGEAAKLSEGSKNAGGQFAFNTLRYIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGACTGG------------------------CTAGTGACTGTTCCATTACAGATAGTGGAGTTCTACTTGATTCTAGCAGCT---------GTA---ACAGCTGTAACAAGC---ATGCTA------------------------------------TTCTGGAGA---TTATTGGGTGCCTCACTAGTAATGTTGGTATTCGGTTACTTAGGTGAA---------GCT------------------GGA------TTG---------------------------------ATG------------------------------------------------------------------GATGTT------------------ACAGTTGGT---TTTATCGTTGGTATGGCTGGCTGGATTTACATCATTTATGAGATC---------------TTT------GCT---GGAGAAGCTGCGAAATTAAGCGAAGGT------AGC---AAAAATGCCGGTGGT---CAA---TTT---GCG---TTT---AAC---ACGCTT---AGATATATTGTAACCATT---------------------------------------------------------------GGTTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LVTVPLQIVEFYLILAA---V-TAVTS-ML------------FWR-LLGASLVMLVFGYLGE---A------G--L-----------M----------------------DV------TVG-FIVGMAGWIYIIYEI-----F--A-GEAAKLSEG--S-KNAGG-Q-F-A-F-N-TL-RYIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-a]_1105141786402 [unk-euryarch-a] JCVI_ORF_1105141786402_GS035_Coastal_2m jcvi|1105141786402| 1105141786402 JCVI ORF 1105141786402 1105141786402 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 01-mars-04 Coastal/2m_depth/S_34.5_psu/GS035/Wolf_Island/Galapagos_Islands Pacific Ocean marine 1.3891667 -91.81695 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGATCGCTTCAATGACACTGTTAGCTGAAAATGATTACGTTGGAATGACTTTTTGGTTAGCTACATCTATAATGTTGGCATCTACTGTTTTCTTTTTCATAGAAAGAGCAGATGTAGCAGGTAAATGGAGAACCTCCATGACTGTTGCTGGCCTTGTAACAGGTATTGCATTTTGGCATTACCTATACATGAGAGAAGCCCACCTTCAAGGAGAAGTAACTACTGTATTTCGTTACATTGACTGGTTAGTCACTGTACCGTTGCAGATAGTGGAGTTTTATCTGATACTAGCAGCTGTAACAGCTGTAACAAGCATTCTATTCTGGCGATTATTGGGTGCCTCGCTTGTAATGTTGGTATTTGGTTATCTAGGTGAAGCTGGTTTGATGGATGTTACAGTTGGTTTTATTATTGGTATGGCTGGCTGGATATATATCATCTATGAAATCTTTGCTGGAGAAGCCGCGAAATTAAATGAAGGTAGTAAAAACGCTGGCGGTCAGTTTGCGTTCAATACGTTAAGATACATTGTAACTATTGGATGGGCGATTTATCCAATCGGATATTTCTTAGGATATATGTCTGGTAGTGAAACTACTGACTTTGGTACAGTAAATATTATTTACAATATTGCTGATCTAGTTAATAAAACAGCCTTTGGTTTAGCTATCTGGGTTGGTGCTACTATGGATAGCTCCAAG MIASMTLLAENDYVGMTFWLATSIMLASTVFFFIERADVAGKWRTSMTVAGLVTGIAFWHYLYMREAHLQGEVTTVFRYIDWLVTVPLQIVEFYLILAAVTAVTSILFWRLLGASLVMLVFGYLGEAGLMDVTVGFIIGMAGWIYIIYEIFAGEAAKLNEGSKNAGGQFAFNTLRYIVTIGWAIYPIGYFLGYMSGSETTDFGTVNIIYNIADLVNKTAFGLAIWVGATMDSSK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGATCGCTTCAATGACACTGTTAGCTGAAAATGATTACGTTGGAATGACTTTTTGGTTAGCTACATCTATAATGTTGGCATCTACTGTTTTCTTTTTCATAGAAAGAGCAGATGTAGCAGGT---AAATGGAGAACCTCCATGACTGTTGCTGGCCTTGTAACAGGTATTGCATTTTGGCATTACCTATACATGAGAGAAGCCCACCTT------------------------------------------------------CAAGGAGAAGTAACTACTGTATTTCGTTACATTGACTGG------------------------TTAGTCACTGTACCGTTGCAGATAGTGGAGTTTTATCTGATACTAGCAGCT---------GTA---ACAGCTGTAACAAGC---ATTCTA------------------------------------TTCTGGCGA---TTATTGGGTGCCTCGCTTGTAATGTTGGTATTTGGTTATCTAGGTGAA---------GCT------------------GGT------TTG---------------------------------ATG------------------------------------------------------------------GATGTT------------------ACAGTTGGT---TTTATTATTGGTATGGCTGGCTGGATATATATCATCTATGAAATC---------------TTT------GCT---GGAGAAGCCGCGAAATTAAATGAAGGT------AGT---AAAAACGCTGGCGGT---CAG---TTT---GCG---TTC---AAT---ACGTTA---AGATACATTGTAACTATT---------------------------------------------------------------GGATGG---------GCGATTTATCCAATCGGATATTTCTTAGGATATATGTCTGGT---------------------------------AGTGAAACTACTGACTTTGGTACAGTAAATATTATTTACAATATTGCTGATCTAGTTAATAAAACAGCCTTTGGTTTAGCTATCTGGGTTGGTGCTACTATGGATAGCTCCAAG--------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------MIASMTLLAENDYVGMTFWLATSIMLASTVFFFIERADVAG-KWRTSMTVAGLVTGIAFWHYLYMREAHL------------------QGEVTTVFRYIDW--------LVTVPLQIVEFYLILAA---V-TAVTS-IL------------FWR-LLGASLVMLVFGYLGE---A------G--L-----------M----------------------DV------TVG-FIIGMAGWIYIIYEI-----F--A-GEAAKLNEG--S-KNAGG-Q-F-A-F-N-TL-RYIVTI---------------------GW---AIYPIGYFLGYMSG-----------SETTDFGTVNIIYNIADLVNKTAFGLAIWVGATMDSSK--------------------------------------- [unk-euryarch-a]_DQ422261 [unk-euryarch-a] clone_med-20m-a9_DQ422261 gi|90024042|gb|DQ422261| Uncultured bacterium clone med-20m-a9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-a9 putative proteorhodopsin gene, partial cds. DQ422261 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAGTCACTGTACCATTGCAGATAGTGGAGTTTTATCTGATACTGGCTGCTGTAACAGCTGTAACAAGCATATTATTCTGGCGATTATTGGGTGCCTCGCTTGTAATGTTGGTATTTGGTTATCTCGGTGAAGCTGGTTTGATGGATGTTACAGTTGGTTTTATTATTGGTATGGCTGGCTGGATATATATCATCTATGAAATCTTTGCTGGAGAAGCTGCGAAATTAAACGAAGGTAGTAAAAACGCTGGTGGTCAGTTTGCGTTCAATACGCTCAGATACATTGTAACTATTGGGTGGGCTATTTATCCA RYIDWLVTVPLQIVEFYLILAAVTAVTSILFWRLLGASLVMLVFGYLGEAGLMDVTVGFIIGMAGWIYIIYEIFAGEAAKLNEGSKNAGGQFAFNTLRYIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAGTCACTGTACCATTGCAGATAGTGGAGTTTTATCTGATACTGGCTGCT---------GTA---ACAGCTGTAACAAGC---ATATTA------------------------------------TTCTGGCGA---TTATTGGGTGCCTCGCTTGTAATGTTGGTATTTGGTTATCTCGGTGAA---------GCT------------------GGT------TTG---------------------------------ATG------------------------------------------------------------------GATGTT------------------ACAGTTGGT---TTTATTATTGGTATGGCTGGCTGGATATATATCATCTATGAAATC---------------TTT------GCT---GGAGAAGCTGCGAAATTAAACGAAGGT------AGT---AAAAACGCTGGTGGT---CAG---TTT---GCG---TTC---AAT---ACGCTC---AGATACATTGTAACTATT---------------------------------------------------------------GGGTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LVTVPLQIVEFYLILAA---V-TAVTS-IL------------FWR-LLGASLVMLVFGYLGE---A------G--L-----------M----------------------DV------TVG-FIIGMAGWIYIIYEI-----F--A-GEAAKLNEG--S-KNAGG-Q-F-A-F-N-TL-RYIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-a]_DQ422271 [unk-euryarch-a] clone_med-20m-b7_DQ422271 gi|90024062|gb|DQ422271| Uncultured bacterium clone med-20m-b7 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-20m-b7 putative proteorhodopsin gene, partial cds. DQ422271 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 20m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAGTCACTGTACCATTGCAGATAGTGGAGTTTTATCTGATACTGGCTGCTGTAACAGCTGTAACAAGCATATTATTCTGGCGATTATTGGGTGCCTCGCTTGTAATGTTGGTATTTGGTTATCTCGGTGAAGCTGGTTTGATGGATGTTACAGTTGGTTTTATTATTGGTATGGCTGGCTGGATATATATCATCTATGAAATCTTTGCTGGAGAAGCTGCGAAATTAAACGAAGGTAGTAAAAACGCTGGTGGTCAGTTTGCGTTCAATACGCTCAGATACATTGTAACTATTGGTTGGGCTATTTATCCA RYIDWLVTVPLQIVEFYLILAAVTAVTSILFWRLLGASLVMLVFGYLGEAGLMDVTVGFIIGMAGWIYIIYEIFAGEAAKLNEGSKNAGGQFAFNTLRYIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAGTCACTGTACCATTGCAGATAGTGGAGTTTTATCTGATACTGGCTGCT---------GTA---ACAGCTGTAACAAGC---ATATTA------------------------------------TTCTGGCGA---TTATTGGGTGCCTCGCTTGTAATGTTGGTATTTGGTTATCTCGGTGAA---------GCT------------------GGT------TTG---------------------------------ATG------------------------------------------------------------------GATGTT------------------ACAGTTGGT---TTTATTATTGGTATGGCTGGCTGGATATATATCATCTATGAAATC---------------TTT------GCT---GGAGAAGCTGCGAAATTAAACGAAGGT------AGT---AAAAACGCTGGTGGT---CAG---TTT---GCG---TTC---AAT---ACGCTC---AGATACATTGTAACTATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LVTVPLQIVEFYLILAA---V-TAVTS-IL------------FWR-LLGASLVMLVFGYLGE---A------G--L-----------M----------------------DV------TVG-FIIGMAGWIYIIYEI-----F--A-GEAAKLNEG--S-KNAGG-Q-F-A-F-N-TL-RYIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-a]_DQ422403 [unk-euryarch-a] clone_med-50m-e11_DQ422403 gi|90024326|gb|DQ422403| Uncultured bacterium clone med-50m-e11 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-e11 putative proteorhodopsin gene, partial cds. DQ422403 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTAGTCACTGTACCATTGCAGATAGTGGAGTTTTATCTGATACTGGCTGCTGTAACAGCTGTAACAAGCATATTATTCTGGCGATTATTGGGTGCCTCGCTTGTAATGTTGGTATTTGGTTATCTCGGTGAAGCTGGTTTGATGGATGTTACAGTTGGTTTTATTATTGGTATGGCTGGCTGGATATATATCATCTATGAAATCTTTGCTGGAGAAGCTGCGAAATTAAACGAAGGTAGTAAAAACGCTGGTGGTCAGTTTGCGTTCAATACGCTCAGATACATTGTAACTATTGGTTGGGCGATTTATCCA RYIDWLVTVPLQIVEFYLILAAVTAVTSILFWRLLGASLVMLVFGYLGEAGLMDVTVGFIIGMAGWIYIIYEIFAGEAAKLNEGSKNAGGQFAFNTLRYIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAGTCACTGTACCATTGCAGATAGTGGAGTTTTATCTGATACTGGCTGCT---------GTA---ACAGCTGTAACAAGC---ATATTA------------------------------------TTCTGGCGA---TTATTGGGTGCCTCGCTTGTAATGTTGGTATTTGGTTATCTCGGTGAA---------GCT------------------GGT------TTG---------------------------------ATG------------------------------------------------------------------GATGTT------------------ACAGTTGGT---TTTATTATTGGTATGGCTGGCTGGATATATATCATCTATGAAATC---------------TTT------GCT---GGAGAAGCTGCGAAATTAAACGAAGGT------AGT---AAAAACGCTGGTGGT---CAG---TTT---GCG---TTC---AAT---ACGCTC---AGATACATTGTAACTATT---------------------------------------------------------------GGTTGG---------GCGATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LVTVPLQIVEFYLILAA---V-TAVTS-IL------------FWR-LLGASLVMLVFGYLGE---A------G--L-----------M----------------------DV------TVG-FIIGMAGWIYIIYEI-----F--A-GEAAKLNEG--S-KNAGG-Q-F-A-F-N-TL-RYIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-a]_DQ203564 [unk-euryarch-a] MedHO1202G4_env_samples_DQ203564 gi|77547576|gb|DQ203564| Uncultured bacterium clone MedHO1202G4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202G4 predicted proteorhodopsin gene, partial cds DQ203564 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATAGACTGGCTAGTCACTGTACCATTGCAGATAGTTGAGTTTTATCTGATACTAGCAGCTGTAACAGCTGTAACAAGCATTCTATTCTGGCGATTATTGGGTGCCTCGCTTGTAATGTTAGTATTTGGTTATCTTGGTGAAGCTGGTTTGATGGATGTTACAGTTGGTTTTATTATTGGTATGGCTGGCTGGATATATATCATCTATGAGATCTTTGCTGGAGAAGCTGCTAAGCTAAGTGAAGACAGTAAAAACGCTGGTGGTCAGTTTGCGTTTAATACGCTTAGATATATTGTAACTATTGGTTGGGCCATTTATCCA RYIDWLVTVPLQIVEFYLILAAVTAVTSILFWRLLGASLVMLVFGYLGEAGLMDVTVGFIIGMAGWIYIIYEIFAGEAAKLSEDSKNAGGQFAFNTLRYIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAGTCACTGTACCATTGCAGATAGTTGAGTTTTATCTGATACTAGCAGCT---------GTA---ACAGCTGTAACAAGC---ATTCTA------------------------------------TTCTGGCGA---TTATTGGGTGCCTCGCTTGTAATGTTAGTATTTGGTTATCTTGGTGAA---------GCT------------------GGT------TTG---------------------------------ATG------------------------------------------------------------------GATGTT------------------ACAGTTGGT---TTTATTATTGGTATGGCTGGCTGGATATATATCATCTATGAGATC---------------TTT------GCT---GGAGAAGCTGCTAAGCTAAGTGAAGAC------AGT---AAAAACGCTGGTGGT---CAG---TTT---GCG---TTT---AAT---ACGCTT---AGATATATTGTAACTATT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LVTVPLQIVEFYLILAA---V-TAVTS-IL------------FWR-LLGASLVMLVFGYLGE---A------G--L-----------M----------------------DV------TVG-FIIGMAGWIYIIYEI-----F--A-GEAAKLSED--S-KNAGG-Q-F-A-F-N-TL-RYIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-a]_DQ422170 [unk-euryarch-a] clone_med-0m-b7_DQ422170 gi|90023860|gb|DQ422170| Uncultured bacterium clone med-0m-b7 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-b7 putative proteorhodopsin gene, partial cds. DQ422170 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTAGTCACTGTACCATTGCAGATAGTGGAGTTTTATCTGATACTAGCAGCTGTAACAGCTGTAACAAGCATTCTATTCTGGCGATTATTGGGTGCCTCGCTTGTAATGTTAGTATTTGGTTATCTTGGTGAAGCTGGTTTGATGGATGTTACAGTTGGTTTTATTATTGGTATGGCTGGCTGGATATATATCATCTATGAGATCTTTGCTGGAGAAGCTGCTAAGCTAAGTGAAGATAGTAAAAACGCTGGTGGTCAGTTTGCGTTTAATACGCTCAGATATATTGTAACTATTGGTTGGGCTATTTATCCA RYIDWLVTVPLQIVEFYLILAAVTAVTSILFWRLLGASLVMLVFGYLGEAGLMDVTVGFIIGMAGWIYIIYEIFAGEAAKLSEDSKNAGGQFAFNTLRYIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAGTCACTGTACCATTGCAGATAGTGGAGTTTTATCTGATACTAGCAGCT---------GTA---ACAGCTGTAACAAGC---ATTCTA------------------------------------TTCTGGCGA---TTATTGGGTGCCTCGCTTGTAATGTTAGTATTTGGTTATCTTGGTGAA---------GCT------------------GGT------TTG---------------------------------ATG------------------------------------------------------------------GATGTT------------------ACAGTTGGT---TTTATTATTGGTATGGCTGGCTGGATATATATCATCTATGAGATC---------------TTT------GCT---GGAGAAGCTGCTAAGCTAAGTGAAGAT------AGT---AAAAACGCTGGTGGT---CAG---TTT---GCG---TTT---AAT---ACGCTC---AGATATATTGTAACTATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LVTVPLQIVEFYLILAA---V-TAVTS-IL------------FWR-LLGASLVMLVFGYLGE---A------G--L-----------M----------------------DV------TVG-FIIGMAGWIYIIYEI-----F--A-GEAAKLSED--S-KNAGG-Q-F-A-F-N-TL-RYIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-a]_1105091234956 [unk-euryarch-a] JCVI_ORF_1105091234956_GS021_Coastal_2m jcvi|1105091234956| 1105091234956 JCVI ORF 1105091234956 1105091234956 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 19-janv-04 Coastal/2m_depth/S_30.7_psu/GS021/Gulf_of_Panama/Eastern_Tropical_Pacific Pacific Ocean marine 8.129167 -79.69111 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGATCGCTTCAAGTACACTACTAGCGTCTAACGATTATGTTGGTATGACATTTTGGTTAGCGACAGCAATAATGTTAGCGTCCACTGTGTTCTTTTTCGTAGAAAGAACAGATGTTTCTGGGAAATGGAGAACATCAATGACAGTGGCTGGTCTTGTAACAGGAATTGCGTTTTGGCACTATTTGTATATGAGAGATGCTCATATAGCATCTATAAATGGTGGAGAAGCAACAACTACAGTTTTTCGTTACATCGACTGGTTAATCACCGTGCCCTTGCAGATAGTGGAGTTTTATTTGATTTTAGCTGCTGTTACTGCTGTAACCAGTATGCTATTTTGGCGTCTTCTAGGTGCTTCACTAGTAATGCTGATTTTTGGTTTCTTAGGAGAAGCCGGATTGATGAATGTTACACTTGGCTTTATCATTGGTATGGCTGGTTGGATATATATCATCTATGAAATCTTTGCTGGAGAAGCTGCAAAATTAAACGAAGGTAGTAAAAACGCTGGTGGTCAGTTTGCGTTCAATACGCTCAGATACATTGTAACTATTGGTTGGGCGATTTATCCAATCGGATATTTCCTAGGATATATGTCTGGTAGTGAAACTGCTGACTTTGGTACAGTAAATATTATCTATAATATCGCCGATTTAGTTAACAAAACAGCTTTTGGTTTAGCTATTTGGGTTGGTGCTACAATGGATAGTTCCAAG MIASSTLLASNDYVGMTFWLATAIMLASTVFFFVERTDVSGKWRTSMTVAGLVTGIAFWHYLYMRDAHIASINGGEATTTVFRYIDWLITVPLQIVEFYLILAAVTAVTSMLFWRLLGASLVMLIFGFLGEAGLMNVTLGFIIGMAGWIYIIYEIFAGEAAKLNEGSKNAGGQFAFNTLRYIVTIGWAIYPIGYFLGYMSGSETADFGTVNIIYNIADLVNKTAFGLAIWVGATMDSSK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGATCGCTTCAAGTACACTACTAGCGTCTAACGATTATGTTGGTATGACATTTTGGTTAGCGACAGCAATAATGTTAGCGTCCACTGTGTTCTTTTTCGTAGAAAGAACAGATGTTTCTGGG---AAATGGAGAACATCAATGACAGTGGCTGGTCTTGTAACAGGAATTGCGTTTTGGCACTATTTGTATATGAGAGATGCTCATATA---------------------------------------GCATCTATAAATGGTGGAGAAGCAACAACTACAGTTTTTCGTTACATCGACTGG------------------------TTAATCACCGTGCCCTTGCAGATAGTGGAGTTTTATTTGATTTTAGCTGCT---------GTT---ACTGCTGTAACCAGT---ATGCTA------------------------------------TTTTGGCGT---CTTCTAGGTGCTTCACTAGTAATGCTGATTTTTGGTTTCTTAGGAGAA---------GCC------------------GGA------TTG---------------------------------ATG------------------------------------------------------------------AATGTT------------------ACACTTGGC---TTTATCATTGGTATGGCTGGTTGGATATATATCATCTATGAAATC---------------TTT------GCT---GGAGAAGCTGCAAAATTAAACGAAGGT------AGT---AAAAACGCTGGTGGT---CAG---TTT---GCG---TTC---AAT---ACGCTC---AGATACATTGTAACTATT---------------------------------------------------------------GGTTGG---------GCGATTTATCCAATCGGATATTTCCTAGGATATATGTCTGGT---------------------------------AGTGAAACTGCTGACTTTGGTACAGTAAATATTATCTATAATATCGCCGATTTAGTTAACAAAACAGCTTTTGGTTTAGCTATTTGGGTTGGTGCTACAATGGATAGTTCCAAG--------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------MIASSTLLASNDYVGMTFWLATAIMLASTVFFFVERTDVSG-KWRTSMTVAGLVTGIAFWHYLYMRDAHI-------------ASINGGEATTTVFRYIDW--------LITVPLQIVEFYLILAA---V-TAVTS-ML------------FWR-LLGASLVMLIFGFLGE---A------G--L-----------M----------------------NV------TLG-FIIGMAGWIYIIYEI-----F--A-GEAAKLNEG--S-KNAGG-Q-F-A-F-N-TL-RYIVTI---------------------GW---AIYPIGYFLGYMSG-----------SETADFGTVNIIYNIADLVNKTAFGLAIWVGATMDSSK--------------------------------------- [unk-euryarch-a]_1105124232130 [unk-euryarch-a] JCVI_ORF_1105124232130_GS019_Coastal_2m jcvi|1105124232130| 1105124232130 JCVI ORF 1105124232130 1105124232130 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 12-janv-04 Coastal/2m_depth/S_35.4_psu/GS019/Northeast_of_Colon/Caribbean_Sea Caribbean Sea marine 10.716389 -80.25445 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGATAGCTTCAATTACACTGTTAGCAGAAAATGATTACGTCGGTATGACTTTTTGGTTAGCGACAGCAATAATGTTAGCATCCACTGTATTCTTTTTCATAGAGAGATCAGATGTTTCAGGAAAATGGAGGACATCAATGACTGTTGCTGGCCTCGTAACAGGAATTGCATTCTGGCATTATCTTTACATGAGAGAAGCACACCTTCAAGGGGAGGTAACTACAGTGTTTCGCTATATTGATTGGCTAATCACTGTGCCATTACAAATTGTAGAGTTCTACTTGATTCTAGCTGCTGTAACAGCAGTAACAAGTGTTTTATTCTGGCGTTTGTTAGGTGCATCATTAGTTATGTTGGTATTTGGTTTCTTAGGAGAAGCAGGATTAATGGATGTTACTGTCGGCTTTATCATTGGTATGGCAGGATGGATATATATCATATATGAGATATTTGCTGGAGAAGCAGCTAAACTAAGTGAGGATAGTAAAAACGCTGGCGGTCAGTTTGCGTTCAATACGCTTAGATTGATTGTGACTGTAGGTTGGGCAATTTACCCAATTGGATATTTCCTAGGATATCTGTCGGGAAGTGAAACTACTGATTTTGGTACAGTAAATATTATTTATAATATCGCCGACTTAGTTAACAAAACAGCTTTTGGTTTAGCTATCTGGGTTGGTGCTACTATGGATAGCTCCAAG MIASITLLAENDYVGMTFWLATAIMLASTVFFFIERSDVSGKWRTSMTVAGLVTGIAFWHYLYMREAHLQGEVTTVFRYIDWLITVPLQIVEFYLILAAVTAVTSVLFWRLLGASLVMLVFGFLGEAGLMDVTVGFIIGMAGWIYIIYEIFAGEAAKLSEDSKNAGGQFAFNTLRLIVTVGWAIYPIGYFLGYLSGSETTDFGTVNIIYNIADLVNKTAFGLAIWVGATMDSSK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGATAGCTTCAATTACACTGTTAGCAGAAAATGATTACGTCGGTATGACTTTTTGGTTAGCGACAGCAATAATGTTAGCATCCACTGTATTCTTTTTCATAGAGAGATCAGATGTTTCAGGA---AAATGGAGGACATCAATGACTGTTGCTGGCCTCGTAACAGGAATTGCATTCTGGCATTATCTTTACATGAGAGAAGCACACCTT------------------------------------------------------CAAGGGGAGGTAACTACAGTGTTTCGCTATATTGATTGG------------------------CTAATCACTGTGCCATTACAAATTGTAGAGTTCTACTTGATTCTAGCTGCT---------GTA---ACAGCAGTAACAAGT---GTTTTA------------------------------------TTCTGGCGT---TTGTTAGGTGCATCATTAGTTATGTTGGTATTTGGTTTCTTAGGAGAA---------GCA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------GATGTT------------------ACTGTCGGC---TTTATCATTGGTATGGCAGGATGGATATATATCATATATGAGATA---------------TTT------GCT---GGAGAAGCAGCTAAACTAAGTGAGGAT------AGT---AAAAACGCTGGCGGT---CAG---TTT---GCG---TTC---AAT---ACGCTT---AGATTGATTGTGACTGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCAATTGGATATTTCCTAGGATATCTGTCGGGA---------------------------------AGTGAAACTACTGATTTTGGTACAGTAAATATTATTTATAATATCGCCGACTTAGTTAACAAAACAGCTTTTGGTTTAGCTATCTGGGTTGGTGCTACTATGGATAGCTCCAAG--------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------MIASITLLAENDYVGMTFWLATAIMLASTVFFFIERSDVSG-KWRTSMTVAGLVTGIAFWHYLYMREAHL------------------QGEVTTVFRYIDW--------LITVPLQIVEFYLILAA---V-TAVTS-VL------------FWR-LLGASLVMLVFGFLGE---A------G--L-----------M----------------------DV------TVG-FIIGMAGWIYIIYEI-----F--A-GEAAKLSED--S-KNAGG-Q-F-A-F-N-TL-RLIVTV---------------------GW---AIYPIGYFLGYLSG-----------SETTDFGTVNIIYNIADLVNKTAFGLAIWVGATMDSSK--------------------------------------- [unk-euryarch-a]_DQ203312 [unk-euryarch-a] SS114a80C4_env_samples_DQ203312 gi|77547072|gb|DQ203312| Uncultured bacterium clone SS114a80C4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a80C4 predicted proteorhodopsin gene, partial cds DQ203312 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_80m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_2003 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTATATTGATTGGCTAATCACTGTGCCATTACAAATTGTAGAGTTCTACTTGATTTTAGCTGCTGTAACAGCAGTAACAAGTGTTTTATTCTGGCGTTTGTTAGGTGCATCATTAGTTATGTTGGTATTTGGTTTCTTAGGGGAAGCAGGATTAATGGATGTTACTGTCGGCTTTATCATTGGTATGGCAGGCTGGATATATATCATATATGAGATCTTTGCTGGAGAAGCAGCTAAACTAAGTGAGGATAGTAAAAACGCTGGTGGTCAGTTTGCGTTTAATACGCTTAGATTAATTGTAACTGTTGGGTGGGCAATTTATCCA RYIDWLITVPLQIVEFYLILAAVTAVTSVLFWRLLGASLVMLVFGFLGEAGLMDVTVGFIIGMAGWIYIIYEIFAGEAAKLSEDSKNAGGQFAFNTLRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTATATTGATTGG------------------------CTAATCACTGTGCCATTACAAATTGTAGAGTTCTACTTGATTTTAGCTGCT---------GTA---ACAGCAGTAACAAGT---GTTTTA------------------------------------TTCTGGCGT---TTGTTAGGTGCATCATTAGTTATGTTGGTATTTGGTTTCTTAGGGGAA---------GCA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------GATGTT------------------ACTGTCGGC---TTTATCATTGGTATGGCAGGCTGGATATATATCATATATGAGATC---------------TTT------GCT---GGAGAAGCAGCTAAACTAAGTGAGGAT------AGT---AAAAACGCTGGTGGT---CAG---TTT---GCG---TTT---AAT---ACGCTT---AGATTAATTGTAACTGTT---------------------------------------------------------------GGGTGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TAVTS-VL------------FWR-LLGASLVMLVFGFLGE---A------G--L-----------M----------------------DV------TVG-FIIGMAGWIYIIYEI-----F--A-GEAAKLSED--S-KNAGG-Q-F-A-F-N-TL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-euryarch-a]_1105088334158 [unk-euryarch-a] JCVI_ORF_1105088334158_GS000c_Open_Ocean_5m jcvi|1105088334158| 1105088334158 JCVI ORF 1105088334158 1105088334158 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.22_0.8 other #na 25-FEB-2003 Open_Ocean/5m_depth/S_36.7_psu/GS000c/Sargasso_Stations_3/Sargasso_Sea Sargasso Sea marine 32.174835 -64.01017 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATAACACGGTTTAATAAAATAATAAGGAGATTAAATATGGTAACAACATTAGGAACACCTGAACTTGTTAATATGTCTTTCTGGTTAGCCACGGCAATCATGCTAGCGTCTACGGTATTTTTCTTTGTTGAAAGAGCTGATGTGAATGCAAAATGGAAAACTTCGATGACTGTAGCTGGATTAGTTACAGGAATAGCTTTCTGGCATTATCTTCGCATGAGCGAGATGAATGCTGCAGGAGAAGCCACAACAGTTTACCGTTATGTAGATTGGTTAATCACAGTCCCGCTTCAAATCGTCGAGTTTTACCTGATTCTACTAGCAGTTACCGCAGTCAGTAGTGGTCTATTTTGGAGATTACTAGGGGCATCCCTGGTCATGTTGGTTTTTGGGTTTTTAGGTGAAGCCGGTTTAATGAACTCAACGATTGCGTTCATTCCAGGTATGGCTGGCTGGTTGTACATACTTTATGAAATTTTTTCTGGAGAAGCAGCAAGCTTAAGTGCAAGCAGTAAAAATCCAGGTGGTCAATTTGCATTCAATACACTAAGGATTATCGTTACAGCAGGATGGGCGATTTATCCAATCGGATATTTTCTTGGCTATTTAGCAGGTGGAACTGATATGGATACGGTGAACATCATATACAATGTTGCTGATTTAGTGAATAAAACTGCGTTTGGTCTGGCAATTTGGACCGGCGCTAAAATGGATTCAAAA ITRFNKIIRRLNMVTTLGTPELVNMSFWLATAIMLASTVFFFVERADVNAKWKTSMTVAGLVTGIAFWHYLRMSEMNAAGEATTVYRYVDWLITVPLQIVEFYLILLAVTAVSSGLFWRLLGASLVMLVFGFLGEAGLMNSTIAFIPGMAGWLYILYEIFSGEAASLSASSKNPGGQFAFNTLRIIVTAGWAIYPIGYFLGYLAGGTDMDTVNIIYNVADLVNKTAFGLAIWTGAKMDSK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAACACGGTTTAATAAAATAATAAGGAGATTAAATATGGTAACAACATTAGGAACACCTGAACTTGTTAATATGTCTTTCTGGTTAGCCACGGCAATCATGCTAGCGTCTACGGTATTTTTCTTTGTTGAAAGAGCTGATGTGAATGCA---AAATGGAAAACTTCGATGACTGTAGCTGGATTAGTTACAGGAATAGCTTTCTGGCATTATCTTCGCATGAGCGAGATGAATGCT------------------------------------------------------GCAGGAGAAGCCACAACAGTTTACCGTTATGTAGATTGG------------------------TTAATCACAGTCCCGCTTCAAATCGTCGAGTTTTACCTGATTCTACTAGCA---------GTT---ACCGCAGTCAGTAGT---GGTCTA------------------------------------TTTTGGAGA---TTACTAGGGGCATCCCTGGTCATGTTGGTTTTTGGGTTTTTAGGTGAA---------GCC------------------GGT------TTA---------------------------------ATG------------------------------------------------------------------AACTCA------------------ACGATTGCG---TTCATTCCAGGTATGGCTGGCTGGTTGTACATACTTTATGAAATT---------------TTT------TCT---GGAGAAGCAGCAAGCTTAAGTGCAAGC------AGT---AAAAATCCAGGTGGT---CAA---TTT---GCA---TTC---AAT---ACACTA---AGGATTATCGTTACAGCA---------------------------------------------------------------GGATGG---------GCGATTTATCCAATCGGATATTTTCTTGGCTATTTA---------------------------------------GCAGGTGGAACTGATATGGATACGGTGAACATCATATACAATGTTGCTGATTTAGTGAATAAAACTGCGTTTGGTCTGGCAATTTGGACCGGCGCTAAAATGGATTCAAAA------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------ITRFNKIIRRLNMVTTLGTPELVNMSFWLATAIMLASTVFFFVERADVNA-KWKTSMTVAGLVTGIAFWHYLRMSEMNA------------------AGEATTVYRYVDW--------LITVPLQIVEFYLILLA---V-TAVSS-GL------------FWR-LLGASLVMLVFGFLGE---A------G--L-----------M----------------------NS------TIA-FIPGMAGWLYILYEI-----F--S-GEAASLSAS--S-KNPGG-Q-F-A-F-N-TL-RIIVTA---------------------GW---AIYPIGYFLGYL-------------AGGTDMDTVNIIYNVADLVNKTAFGLAIWTGAKMDSK---------------------------------------- [II-CFB-MS024]_FJ560845 [II-CFB-MS024] HEL132_env_samples_FJ560845 gi|223868837|gb|FJ560845| Uncultured microorganism clone HEL132 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL132 putative proteorhodopsin gene, partial cds FJ560845 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTGCCATTAATGTGTGTTGAGTTTTATCTTCTTCTTAAAGTAGCAGGAGCTACAACAAAACACCTTCGCGATCTTATTGTGTTGTCCTTAATAATGCTAATCACTGGTTATGTTGGTGAAGCAGGAATGGGCAATGCTGCGCTTTGGGGTCTATTTTCAGGTTTAGCATATTTTGCAATTGTCTATATGATCAAATATGGAGAGCTTGCAAAGCTTGCGAAGTCTGCTGGAGGTTCAGTTGAGAAAGCGACA TVPLMCVEFYLLLKVAGATTKHLRDLIVLSLIMLITGYVGEAGMGNAALWGLFSGLAYFAIVYMIKYGELAKLAKSAGGSVEKAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTGCCATTAATGTGTGTTGAGTTTTATCTTCTTCTTAAAGTA---------GCA------GGAGCTACAACA---AAACAC------------------------------------CTTCGCGAT---CTTATTGTGTTGTCCTTAATAATGCTAATCACTGGTTATGTTGGTGAA---------GCA------------------GGA------ATGGGC---------------------------------------------------------------------------------------------------AATGCT------------------GCGCTTTGG---GGTCTATTTTCAGGTTTAGCATATTTTGCAATTGTCTATATGATC---------------AAA------TAT---GGAGAGCTTGCAAAGCTTGCGAAGTCT------GCT---GGAGGTTCA---GTT---GAG---AAA---GCG---ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLMCVEFYLLLKV---A--GATT-KH------------LRD-LIVLSLIMLITGYVGE---A------G--MG---------------------------------NA------ALW-GLFSGLAYFAIVYMI-----K--Y-GELAKLAKS--A-GGS-V-E-K-A-T-------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_EU079139 [II-CFB-MS024] NASB_34_env_samples_EU079139 gi|156106439|gb|EU079139| Uncultured organism clone NASB 34 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 34 putative proteorhodopsin gene, partial cds EU079139 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGTTATATTGATTGGATACTTACAGTTCCATTGATGTGTGATGAGTTCTATTTAATTCTAAAGGCTGCTGGTGCAACAACCAAACACCTTCAGACGTTAATCTGGGCTTCACTTGTTATGCTTGTTACAGGTTACTTTGGAGAAGTTTCTGACGGAAATGCATGGTCATGGGGTCTTGCTTCTGGTATAGCATACTTCTACATCGCATACTTAATCACGTTTGGTGAGCTAGCTAAACTTGCTGCATCTGCTGGTGGAGCGGTTGAAAAAGCACACAAAACATTAACTCTTTTTGTACTTATCGGGTGGGCTATATAC RYIDWILTVPLMCDEFYLILKAAGATTKHLQTLIWASLVMLVTGYFGEVSDGNAWSWGLASGIAYFYIAYLITFGELAKLAASAGGAVEKAHKTLTLFVLIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTATATTGATTGG------------------------ATACTTACAGTTCCATTGATGTGTGATGAGTTCTATTTAATTCTAAAGGCT---------GCT------GGTGCAACAACC---AAACAC------------------------------------CTTCAGACG---TTAATCTGGGCTTCACTTGTTATGCTTGTTACAGGTTACTTTGGAGAA---------GTT------------------TCT------GACGGA---------------------------------------------------------------------------------------------------AATGCA------------------TGGTCATGG---GGTCTTGCTTCTGGTATAGCATACTTCTACATCGCATACTTAATC---------------ACG------TTT---GGTGAGCTAGCTAAACTTGCTGCATCT------GCT---GGTGGAGCG---GTT---GAA---AAA---GCA---CAC---AAA---ACATTA---ACTCTTTTTGTACTTATC---------------------------------------------------------------GGGTGG---------GCTATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------ILTVPLMCDEFYLILKA---A--GATT-KH------------LQT-LIWASLVMLVTGYFGE---V------S--DG---------------------------------NA------WSW-GLASGIAYFYIAYLI-----T--F-GELAKLAAS--A-GGA-V-E-K-A-H-K-TL-TLFVLI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ926152 [II-CFB-MS024] BOUM_OTU065_env_samples gb|KJ926152| Uncultured bacterium clone BOUM OTU065 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU065 putative proteorhodopsin gene, partial cds KJ926152 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 33.709667 32.644667 #na #na #na #na #na ATTGATTGGATACTAACAGTTCCATTGATGTGTGTTGAGTTCTATTTAATTCTAAAGGCTGCTGGTGCAACAACCAAACACCTTAAGACGTTAATCTGGGCTTCACTTGTGATGCTTGTCACAGGTTACTTCGGTGAAGTTGCTGACGGCGGTACTGCAATGCCTGCACTTTGGGGTCTTGCTTCTGGTGTAGCTTATTTCTACATTGCATACCTAATCAAGTATGGTGAGCTAGCTAAGCTTGCTACATCTGCGGGTGGAGCGGTTGAAAAAGCACACAAAACATTAACTCTTTTTGTACTTATCGGGTGGGCAATTTAC IDWILTVPLMCVEFYLILKAAGATTKHLKTLIWASLVMLVTGYFGEVADGGTAMPALWGLASGVAYFYIAYLIKYGELAKLATSAGGAVEKAHKTLTLFVLIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGATTGG------------------------ATACTAACAGTTCCATTGATGTGTGTTGAGTTCTATTTAATTCTAAAGGCT---------GCT------GGTGCAACAACC---AAACAC------------------------------------CTTAAGACG---TTAATCTGGGCTTCACTTGTGATGCTTGTCACAGGTTACTTCGGTGAA---------GTT------------------GCT------GACGGC------------------------------------------------------GGT---------ACT---------------------------GCAATGCCT------------------GCACTTTGG---GGTCTTGCTTCTGGTGTAGCTTATTTCTACATTGCATACCTAATC---------------AAG------TAT---GGTGAGCTAGCTAAGCTTGCTACATCT------GCG---GGTGGAGCG---GTT---GAA---AAA---GCA---CAC---AAA---ACATTA---ACTCTTTTTGTACTTATC---------------------------------------------------------------GGGTGG---------GCAATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDW--------ILTVPLMCVEFYLILKA---A--GATT-KH------------LKT-LIWASLVMLVTGYFGE---V------A--DG------------------G---T---------AMP------ALW-GLASGVAYFYIAYLI-----K--Y-GELAKLATS--A-GGA-V-E-K-A-H-K-TL-TLFVLI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-MS024]_EU079148 [II-CFB-MS024] NASB_93_env_samples_EU079148 gi|156106457|gb|EU079148| Uncultured organism clone NASB 93 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 93 putative proteorhodopsin gene, partial cds EU079148 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGCTATGTTGATTGGATACTAACAGTTCCATTGATGTGTGTTGAGTTCTATTTAATTCTAAAGGCTGCTGGTGCAACGACCAAACACCTTAAGACGTTAATCTGGGCTTCACTTGTGATGCTTGTCACAGGTTACTTCGGTGAAGTTGCTGACGGCGGTACTGCAATGCCTGCACTTTGGGGTTTTGCTTCTGGTGTAGCTTATTTCTACATTGCATACCTAATCAAGTATGGTGAGCTAGCTAAGCTTGCTGCATCTGCGGGTGGAGCGGTTGAAAAAGCACATAAAACATTAACTCTTTTTGTACTTATCGGATGGGCAATTTAC RYVDWILTVPLMCVEFYLILKAAGATTKHLKTLIWASLVMLVTGYFGEVADGGTAMPALWGFASGVAYFYIAYLIKYGELAKLAASAGGAVEKAHKTLTLFVLIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTATGTTGATTGG------------------------ATACTAACAGTTCCATTGATGTGTGTTGAGTTCTATTTAATTCTAAAGGCT---------GCT------GGTGCAACGACC---AAACAC------------------------------------CTTAAGACG---TTAATCTGGGCTTCACTTGTGATGCTTGTCACAGGTTACTTCGGTGAA---------GTT------------------GCT------GACGGC------------------------------------------------------GGT---------ACT---------------------------GCAATGCCT------------------GCACTTTGG---GGTTTTGCTTCTGGTGTAGCTTATTTCTACATTGCATACCTAATC---------------AAG------TAT---GGTGAGCTAGCTAAGCTTGCTGCATCT------GCG---GGTGGAGCG---GTT---GAA---AAA---GCA---CAT---AAA---ACATTA---ACTCTTTTTGTACTTATC---------------------------------------------------------------GGATGG---------GCAATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------ILTVPLMCVEFYLILKA---A--GATT-KH------------LKT-LIWASLVMLVTGYFGE---V------A--DG------------------G---T---------AMP------ALW-GFASGVAYFYIAYLI-----K--Y-GELAKLAAS--A-GGA-V-E-K-A-H-K-TL-TLFVLI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-MS024]_EU079138 [II-CFB-MS024] NASB_1_env_samples_EU079138 gi|156106437|gb|EU079138| Uncultured organism clone NASB 1 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 1 putative proteorhodopsin gene, partial cds EU079138 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGTTACGTAGACTGGATACTAACAGTTCCATTGATGTGTGTTGAGTTCTATTTAATTCTAAAGGCTGCTGGTGCAACAACCAAACACCTTAAGACGTTAATCTGGGCTTCACTTGTGATGCTTGTCACAGGTTACTTCGGTGAAGTTGCTGACGGCGGTACTGCAATGCCTGCACTTTGGGGTCTTGCTTCTGGTGTAGCTTATATCTACATTGCATACCTAATCAAGTATGGTGAGCTAGCTAAGCTTGCTGCATCTGCGGGTGGAGCGGTTGAAAAAGCACATAAAACACTAACTCTTTTTGTACTTATCGGTTGGGCAATATAC RYVDWILTVPLMCVEFYLILKAAGATTKHLKTLIWASLVMLVTGYFGEVADGGTAMPALWGLASGVAYIYIAYLIKYGELAKLAASAGGAVEKAHKTLTLFVLIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTACGTAGACTGG------------------------ATACTAACAGTTCCATTGATGTGTGTTGAGTTCTATTTAATTCTAAAGGCT---------GCT------GGTGCAACAACC---AAACAC------------------------------------CTTAAGACG---TTAATCTGGGCTTCACTTGTGATGCTTGTCACAGGTTACTTCGGTGAA---------GTT------------------GCT------GACGGC------------------------------------------------------GGT---------ACT---------------------------GCAATGCCT------------------GCACTTTGG---GGTCTTGCTTCTGGTGTAGCTTATATCTACATTGCATACCTAATC---------------AAG------TAT---GGTGAGCTAGCTAAGCTTGCTGCATCT------GCG---GGTGGAGCG---GTT---GAA---AAA---GCA---CAT---AAA---ACACTA---ACTCTTTTTGTACTTATC---------------------------------------------------------------GGTTGG---------GCAATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------ILTVPLMCVEFYLILKA---A--GATT-KH------------LKT-LIWASLVMLVTGYFGE---V------A--DG------------------G---T---------AMP------ALW-GLASGVAYIYIAYLI-----K--Y-GELAKLAAS--A-GGA-V-E-K-A-H-K-TL-TLFVLI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-MS024]_EU079145 [II-CFB-MS024] NASB_52_env_samples_EU079145 gi|156106451|gb|EU079145| Uncultured organism clone NASB 52 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 52 putative proteorhodopsin gene, partial cds EU079145 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGTTACGTAGACTGGATACTAACAGTTCCATTGATGTGTGTTGAGTTCTATTTAATTCTAAAGGCTGCTGGTGCAACAACCAAACACCTTAAGACGTTAATCTGGGCTTCACTTGTGATGCTTGTCACAGGTTACTTCGGTGAAGTTGCTGACGGCGGTACTGCAATGCCTGCACTTTGGGGTCTTGCTTCTGGTGTAGCTTATATCTACATTGCATACCTAATCAAGTATGGTGAGCTAGCTAAGCTTGCTGCATCTGCGGGTGGAGCGGTTGAAAAAGCACATAAAACACTAACTCTTTTTGTACTTATCGGTTGGGCAATATAC RYVDWILTVPLMCVEFYLILKAAGATTKHLKTLIWASLVMLVTGYFGEVADGGTAMPALWGLASGVAYIYIAYLIKYGELAKLAASAGGAVEKAHKTLTLFVLIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTACGTAGACTGG------------------------ATACTAACAGTTCCATTGATGTGTGTTGAGTTCTATTTAATTCTAAAGGCT---------GCT------GGTGCAACAACC---AAACAC------------------------------------CTTAAGACG---TTAATCTGGGCTTCACTTGTGATGCTTGTCACAGGTTACTTCGGTGAA---------GTT------------------GCT------GACGGC------------------------------------------------------GGT---------ACT---------------------------GCAATGCCT------------------GCACTTTGG---GGTCTTGCTTCTGGTGTAGCTTATATCTACATTGCATACCTAATC---------------AAG------TAT---GGTGAGCTAGCTAAGCTTGCTGCATCT------GCG---GGTGGAGCG---GTT---GAA---AAA---GCA---CAT---AAA---ACACTA---ACTCTTTTTGTACTTATC---------------------------------------------------------------GGTTGG---------GCAATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------ILTVPLMCVEFYLILKA---A--GATT-KH------------LKT-LIWASLVMLVTGYFGE---V------A--DG------------------G---T---------AMP------ALW-GLASGVAYIYIAYLI-----K--Y-GELAKLAAS--A-GGA-V-E-K-A-H-K-TL-TLFVLI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-MS024]_EU079144 [II-CFB-MS024] NASB_50_env_samples_EU079144 gi|156106449|gb|EU079144| Uncultured organism clone NASB 50 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 50 putative proteorhodopsin gene, partial cds EU079144 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGTTACGTTGACTGGATACTAACAGTTCCATTGATGTGTGTTGAGTTCTATTTAATTCTAAAAGCTGCTGGTGCAACAACCAAACACCTTAAGACGTTAATCTGGGCTTCACTTGTGATGCTTGTCACAGGTTACTTCGGTGAAGTTGCTGACGGCGGTACTGCAATGCCTGCACTTTGGGGTCTTGCTTCTGGTGTAGCTTATTTCTACATTGCATACCTAATCAAGTATGGTGAGCTAGCTAAGCTTGCTGCATCTGCGGGTGGAGCGGTTGAAAAAGCACACAAAACATTAACTCTTTTTGTACTTATCGGTTGGGCAATTTAC RYVDWILTVPLMCVEFYLILKAAGATTKHLKTLIWASLVMLVTGYFGEVADGGTAMPALWGLASGVAYFYIAYLIKYGELAKLAASAGGAVEKAHKTLTLFVLIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTACGTTGACTGG------------------------ATACTAACAGTTCCATTGATGTGTGTTGAGTTCTATTTAATTCTAAAAGCT---------GCT------GGTGCAACAACC---AAACAC------------------------------------CTTAAGACG---TTAATCTGGGCTTCACTTGTGATGCTTGTCACAGGTTACTTCGGTGAA---------GTT------------------GCT------GACGGC------------------------------------------------------GGT---------ACT---------------------------GCAATGCCT------------------GCACTTTGG---GGTCTTGCTTCTGGTGTAGCTTATTTCTACATTGCATACCTAATC---------------AAG------TAT---GGTGAGCTAGCTAAGCTTGCTGCATCT------GCG---GGTGGAGCG---GTT---GAA---AAA---GCA---CAC---AAA---ACATTA---ACTCTTTTTGTACTTATC---------------------------------------------------------------GGTTGG---------GCAATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------ILTVPLMCVEFYLILKA---A--GATT-KH------------LKT-LIWASLVMLVTGYFGE---V------A--DG------------------G---T---------AMP------ALW-GLASGVAYFYIAYLI-----K--Y-GELAKLAAS--A-GGA-V-E-K-A-H-K-TL-TLFVLI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-MS024]_EU079147 [II-CFB-MS024] NASB_84_env_samples_EU079147 gi|156106455|gb|EU079147| Uncultured organism clone NASB 84 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 84 putative proteorhodopsin gene, partial cds EU079147 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGTTACGTTGACTGGATACTAACAGTTCCATTGATGTGTGTTGAGTTCTATTTAATTCTAAAGGCTGCTGGTGCAACAACCAAACACCTTAGGACGTTAATCTGGGCTTCACTTGTGATGCTTGTCACAGGTTACTTCGGTGAAGTTGCTGACGGCGGTACTGCAATGCCTGCACTTTGGGGTCTTGCTTCTGGTGTAGCTTATTTCTACATTGCATACCTAATCAAGTATGGTGAGCTAGCTAAGCTTGCTGCATCTGCGGGTGGAGCGGTTGAAAAAGCACACAAAACATTAACTCTTTTTGTACTTATCGGCTGGGCAATATAT RYVDWILTVPLMCVEFYLILKAAGATTKHLRTLIWASLVMLVTGYFGEVADGGTAMPALWGLASGVAYFYIAYLIKYGELAKLAASAGGAVEKAHKTLTLFVLIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTACGTTGACTGG------------------------ATACTAACAGTTCCATTGATGTGTGTTGAGTTCTATTTAATTCTAAAGGCT---------GCT------GGTGCAACAACC---AAACAC------------------------------------CTTAGGACG---TTAATCTGGGCTTCACTTGTGATGCTTGTCACAGGTTACTTCGGTGAA---------GTT------------------GCT------GACGGC------------------------------------------------------GGT---------ACT---------------------------GCAATGCCT------------------GCACTTTGG---GGTCTTGCTTCTGGTGTAGCTTATTTCTACATTGCATACCTAATC---------------AAG------TAT---GGTGAGCTAGCTAAGCTTGCTGCATCT------GCG---GGTGGAGCG---GTT---GAA---AAA---GCA---CAC---AAA---ACATTA---ACTCTTTTTGTACTTATC---------------------------------------------------------------GGCTGG---------GCAATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------ILTVPLMCVEFYLILKA---A--GATT-KH------------LRT-LIWASLVMLVTGYFGE---V------A--DG------------------G---T---------AMP------ALW-GLASGVAYFYIAYLI-----K--Y-GELAKLAAS--A-GGA-V-E-K-A-H-K-TL-TLFVLI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-MS024]_EU079143 [II-CFB-MS024] NASB_19_env_samples_EU079143 gi|156106447|gb|EU079143| Uncultured organism clone NASB 19 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 19 putative proteorhodopsin gene, partial cds EU079143 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGCTATGTAGACTGGATACTAACAGTTCCATTGATGTGTGTTGAGTTCTATTTAATTCTAAAGGCTGCTGGTGCAACAACCAAACACCTTAAGACGTTAATCTGGGCTTCACTTGTGATGCTTGTCACAGGTTACTTCGGTGAAGTTGCTGACGGCGGTACTGCAATGCCTGCACTTTGGGGTCTTGCTTCTGGTGTAGCTTATTTCTACATTGCATACCTAATCAAGTATGGTGAGCTAGCTAAGCTTGCTGCATCTGCGGGTGGAGCGGTTGAAAAAGCACACAAAACATTAACTCTTTTTGTACTTATCGGCTGGGCAATCTAT RYVDWILTVPLMCVEFYLILKAAGATTKHLKTLIWASLVMLVTGYFGEVADGGTAMPALWGLASGVAYFYIAYLIKYGELAKLAASAGGAVEKAHKTLTLFVLIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTATGTAGACTGG------------------------ATACTAACAGTTCCATTGATGTGTGTTGAGTTCTATTTAATTCTAAAGGCT---------GCT------GGTGCAACAACC---AAACAC------------------------------------CTTAAGACG---TTAATCTGGGCTTCACTTGTGATGCTTGTCACAGGTTACTTCGGTGAA---------GTT------------------GCT------GACGGC------------------------------------------------------GGT---------ACT---------------------------GCAATGCCT------------------GCACTTTGG---GGTCTTGCTTCTGGTGTAGCTTATTTCTACATTGCATACCTAATC---------------AAG------TAT---GGTGAGCTAGCTAAGCTTGCTGCATCT------GCG---GGTGGAGCG---GTT---GAA---AAA---GCA---CAC---AAA---ACATTA---ACTCTTTTTGTACTTATC---------------------------------------------------------------GGCTGG---------GCAATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------ILTVPLMCVEFYLILKA---A--GATT-KH------------LKT-LIWASLVMLVTGYFGE---V------A--DG------------------G---T---------AMP------ALW-GLASGVAYFYIAYLI-----K--Y-GELAKLAAS--A-GGA-V-E-K-A-H-K-TL-TLFVLI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-MS024]_EU079142 [II-CFB-MS024] NASB_7_env_samples_EU079142 gi|156106445|gb|EU079142| Uncultured organism clone NASB 7 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 7 putative proteorhodopsin gene, partial cds EU079142 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGCTATGTAGACTGGATACTAACAGTTCCATTGATGTGTGTTGAGTTCTATTTAATTCTAAAGGCTGCTGGTGCAACAACCAAACACCTTAAGACGTTAATCTGGGCTTCACTTGTGATGCTTGTCACAGGTTACTTCGGTGAAGTTGCTGACGGCGGTACTGCAATGCCTGCACTTTGGGGTCTTGCTTCTGGTGTAGCTTATTTCTACATTGCATACCTAATCAAGTATGGTGAGCTAGCTAAGCTTGCTGCATCTGCGGGTGGAGCGGTTGAAAAAGCACACAAAACATTAACTCTTTTTGTACTTATCGGCTGGGCAATCTAT RYVDWILTVPLMCVEFYLILKAAGATTKHLKTLIWASLVMLVTGYFGEVADGGTAMPALWGLASGVAYFYIAYLIKYGELAKLAASAGGAVEKAHKTLTLFVLIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTATGTAGACTGG------------------------ATACTAACAGTTCCATTGATGTGTGTTGAGTTCTATTTAATTCTAAAGGCT---------GCT------GGTGCAACAACC---AAACAC------------------------------------CTTAAGACG---TTAATCTGGGCTTCACTTGTGATGCTTGTCACAGGTTACTTCGGTGAA---------GTT------------------GCT------GACGGC------------------------------------------------------GGT---------ACT---------------------------GCAATGCCT------------------GCACTTTGG---GGTCTTGCTTCTGGTGTAGCTTATTTCTACATTGCATACCTAATC---------------AAG------TAT---GGTGAGCTAGCTAAGCTTGCTGCATCT------GCG---GGTGGAGCG---GTT---GAA---AAA---GCA---CAC---AAA---ACATTA---ACTCTTTTTGTACTTATC---------------------------------------------------------------GGCTGG---------GCAATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------ILTVPLMCVEFYLILKA---A--GATT-KH------------LKT-LIWASLVMLVTGYFGE---V------A--DG------------------G---T---------AMP------ALW-GLASGVAYFYIAYLI-----K--Y-GELAKLAAS--A-GGA-V-E-K-A-H-K-TL-TLFVLI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-MS024]_EU079146 [II-CFB-MS024] NASB_53_env_samples_EU079146 gi|156106453|gb|EU079146| Uncultured organism clone NASB 53 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 53 putative proteorhodopsin gene, partial cds EU079146 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGTTATGTAGATTGGATACTAACAGTTCCACTGATGTGTGTTGAGTTCTATTTAATCCTTAAGGCTGCTGGTGCAACAACTAAACACCTTAAGACATTAATTTGGGCTTCACTTGTGATGCTTGTTACAGGTTACTTCGGTGAAGTTGCTGACGGCGGCACTGCAGTGCCTGCACTTTGGGGTCTTGCTTCTGGTGTAGCTTATTTCTACATTGCATACCTAATCAAATATGGTGAGCTAGCTAAGCTTGCTGCATCTGCGGGTGGAGCGGTTGAAAAAGCACACAAAACATTAACACTTTTTGTACTTATCGGCTGGGCCATTTAT RYVDWILTVPLMCVEFYLILKAAGATTKHLKTLIWASLVMLVTGYFGEVADGGTAVPALWGLASGVAYFYIAYLIKYGELAKLAASAGGAVEKAHKTLTLFVLIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTATGTAGATTGG------------------------ATACTAACAGTTCCACTGATGTGTGTTGAGTTCTATTTAATCCTTAAGGCT---------GCT------GGTGCAACAACT---AAACAC------------------------------------CTTAAGACA---TTAATTTGGGCTTCACTTGTGATGCTTGTTACAGGTTACTTCGGTGAA---------GTT------------------GCT------GACGGC------------------------------------------------------GGC---------ACT---------------------------GCAGTGCCT------------------GCACTTTGG---GGTCTTGCTTCTGGTGTAGCTTATTTCTACATTGCATACCTAATC---------------AAA------TAT---GGTGAGCTAGCTAAGCTTGCTGCATCT------GCG---GGTGGAGCG---GTT---GAA---AAA---GCA---CAC---AAA---ACATTA---ACACTTTTTGTACTTATC---------------------------------------------------------------GGCTGG---------GCCATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------ILTVPLMCVEFYLILKA---A--GATT-KH------------LKT-LIWASLVMLVTGYFGE---V------A--DG------------------G---T---------AVP------ALW-GLASGVAYFYIAYLI-----K--Y-GELAKLAAS--A-GGA-V-E-K-A-H-K-TL-TLFVLI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ926150 [II-CFB-MS024] BOUM_OTU063_env_samples gb|KJ926150| Uncultured bacterium clone BOUM OTU063 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU063 putative proteorhodopsin gene, partial cds KJ926150 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 38.6308 7.9097 #na #na #na #na #na GTTGATTGGGTGTTGACTGTGCCGTTAATGTGTGTTGAATTTTACTTAATCCTAAAAGCTGCTGGAGCAACTAAGCAATTGATGTGGAAATTAATCTTCCTTTCAGTAATCATGCTTGTAACAGGTTACTTCGGAGAAGCAGTTCACACTACTGGTAATGGTCCTGCATTATGGGGTCTTATCTCTGGATTAGCTTACTTTGCAATTGTTTTTGAAATCTGGAAAGGTGGGGCTGCAAAACTAGCTGAAGCTGCTGGTGGTGCTGTACTTTCTGCTCACAAAACTCTTTTGAAGTTTGTATTCATCGGATGGGCGATATAT VDWVLTVPLMCVEFYLILKAAGATKQLMWKLIFLSVIMLVTGYFGEAVHTTGNGPALWGLISGLAYFAIVFEIWKGGAAKLAEAAGGAVLSAHKTLLKFVFIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGATTGG------------------------GTGTTGACTGTGCCGTTAATGTGTGTTGAATTTTACTTAATCCTAAAAGCT---------GCT------GGAGCAACTAAG---CAATTG------------------------------------ATGTGGAAA---TTAATCTTCCTTTCAGTAATCATGCTTGTAACAGGTTACTTCGGAGAA---------GCA------------------GTT------CACACT------------------------------------------------------ACT---------GGT---------------------------AATGGTCCT------------------GCATTATGG---GGTCTTATCTCTGGATTAGCTTACTTTGCAATTGTTTTTGAAATC---------------TGG------AAA---GGTGGGGCTGCAAAACTAGCTGAAGCT------GCT---GGTGGTGCT---GTA---CTT---TCT---GCT---CAC---AAA---ACTCTT---TTGAAGTTTGTATTCATC---------------------------------------------------------------GGATGG---------GCGATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------VLTVPLMCVEFYLILKA---A--GATK-QL------------MWK-LIFLSVIMLVTGYFGE---A------V--HT------------------T---G---------NGP------ALW-GLISGLAYFAIVFEI-----W--K-GGAAKLAEA--A-GGA-V-L-S-A-H-K-TL-LKFVFI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-MS024]_EU079140 [II-CFB-MS024] NASB_31_env_samples_EU079140 gi|156106441|gb|EU079140| Uncultured organism clone NASB 31 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 31 putative proteorhodopsin gene, partial cds EU079140 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGTTATGTAGACTGGATCTTAACTGTTCCTTTAATGTGCGTTGAGTTTTATTTAATCTTAAAAGCTGCTGGTGCAACTAAGCAACTTATGTGGAAATTAATTCTTTTATCCACTGTAATGCTTGTTACTGGTTACTTTGGCGAAGGTGTTTACACTAGTGGTAACGGTCCTGCACTTTGGGGTCTAATCTCTGGTCTAGCTTACTTTGCAATTGTTTATGAAATTTGGAAAGGTGAAGCTTCTAAACTAGCTGTATCTGCTGGCGGAGCTGTTCTTTCTGCTCACAAAACACTTGTAAAATTCGTTGTAATTGGCTGGGCAATTTAC RYVDWILTVPLMCVEFYLILKAAGATKQLMWKLILLSTVMLVTGYFGEGVYTSGNGPALWGLISGLAYFAIVYEIWKGEASKLAVSAGGAVLSAHKTLVKFVVIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTATGTAGACTGG------------------------ATCTTAACTGTTCCTTTAATGTGCGTTGAGTTTTATTTAATCTTAAAAGCT---------GCT------GGTGCAACTAAG---CAACTT------------------------------------ATGTGGAAA---TTAATTCTTTTATCCACTGTAATGCTTGTTACTGGTTACTTTGGCGAA---------GGT------------------GTT------TACACT------------------------------------------------------AGT---------GGT---------------------------AACGGTCCT------------------GCACTTTGG---GGTCTAATCTCTGGTCTAGCTTACTTTGCAATTGTTTATGAAATT---------------TGG------AAA---GGTGAAGCTTCTAAACTAGCTGTATCT------GCT---GGCGGAGCT---GTT---CTT---TCT---GCT---CAC---AAA---ACACTT---GTAAAATTCGTTGTAATT---------------------------------------------------------------GGCTGG---------GCAATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------ILTVPLMCVEFYLILKA---A--GATK-QL------------MWK-LILLSTVMLVTGYFGE---G------V--YT------------------S---G---------NGP------ALW-GLISGLAYFAIVYEI-----W--K-GEASKLAVS--A-GGA-V-L-S-A-H-K-TL-VKFVVI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ926156 [II-CFB-MS024] BOUM_OTU069_env_samples gb|KJ926156| Uncultured bacterium clone BOUM OTU069 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU069 putative proteorhodopsin gene, partial cds KJ926156 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 33.709667 32.644667 #na #na #na #na #na GTTGATTGGATCTTAACTGTTCCTTTAATGTGTGTTGAGTTTTATCTAATCTTAAAAGCAGCTGGTGCTACTAAGCAACTTATGTGGAAATTAATTCTTTTATCCACTGTAATGCTTGTTGCTGGGTACTTTGGCGAAGGTGTTTACACTGGTGGAAACGGTCCTGTACTTTGGGGTCTAATCTCTGGTTTAGCTTATTTTGCAATTGTTTATGAAATTTGGAAAGGTGAAGCTTCAAAACTAGCTGCCTCTGCTGGCGGAGCTGTTCTTTCTGCTCACAAAACACTTGTAAAATTTGTCGTAATTGGATGGGCAATATAC VDWILTVPLMCVEFYLILKAAGATKQLMWKLILLSTVMLVAGYFGEGVYTGGNGPVLWGLISGLAYFAIVYEIWKGEASKLAASAGGAVLSAHKTLVKFVVIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGATTGG------------------------ATCTTAACTGTTCCTTTAATGTGTGTTGAGTTTTATCTAATCTTAAAAGCA---------GCT------GGTGCTACTAAG---CAACTT------------------------------------ATGTGGAAA---TTAATTCTTTTATCCACTGTAATGCTTGTTGCTGGGTACTTTGGCGAA---------GGT------------------GTT------TACACT------------------------------------------------------GGT---------GGA---------------------------AACGGTCCT------------------GTACTTTGG---GGTCTAATCTCTGGTTTAGCTTATTTTGCAATTGTTTATGAAATT---------------TGG------AAA---GGTGAAGCTTCAAAACTAGCTGCCTCT------GCT---GGCGGAGCT---GTT---CTT---TCT---GCT---CAC---AAA---ACACTT---GTAAAATTTGTCGTAATT---------------------------------------------------------------GGATGG---------GCAATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------ILTVPLMCVEFYLILKA---A--GATK-QL------------MWK-LILLSTVMLVAGYFGE---G------V--YT------------------G---G---------NGP------VLW-GLISGLAYFAIVYEI-----W--K-GEASKLAAS--A-GGA-V-L-S-A-H-K-TL-VKFVVI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-MS024]_EU079141 [II-CFB-MS024] NASB_20_env_samples_EU079141 gi|156106443|gb|EU079141| Uncultured organism clone NASB 20 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 20 putative proteorhodopsin gene, partial cds EU079141 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGTTACGTCGACTGGATCTTAACTGTTCCATTAATGTGTGTTGAGTTTTATTTAATCCTAAAAGCAGCTGGTGCAACTAAGCAACTTATGTGGAAATTAATTCTTTTATCCACTGTAATGCTTGTTGCTGGTTACTTTGGCGAAGGTGTTTACACTGGTGGAAACGGTCCCGCACTTTGGGGTCTAATCTCTGGTCTAGCTTACTTTGCAATTGTTTATGAAATTTGGAAAGGTGAAGCATCAAAACTAGCAGCGTCTGCTGGTGGAGCTGTTCTTTCTGCTCACAAAACACTTGTAAAATTTGTCGTAATCGGATGGGCCATTTAT RYVDWILTVPLMCVEFYLILKAAGATKQLMWKLILLSTVMLVAGYFGEGVYTGGNGPALWGLISGLAYFAIVYEIWKGEASKLAASAGGAVLSAHKTLVKFVVIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTACGTCGACTGG------------------------ATCTTAACTGTTCCATTAATGTGTGTTGAGTTTTATTTAATCCTAAAAGCA---------GCT------GGTGCAACTAAG---CAACTT------------------------------------ATGTGGAAA---TTAATTCTTTTATCCACTGTAATGCTTGTTGCTGGTTACTTTGGCGAA---------GGT------------------GTT------TACACT------------------------------------------------------GGT---------GGA---------------------------AACGGTCCC------------------GCACTTTGG---GGTCTAATCTCTGGTCTAGCTTACTTTGCAATTGTTTATGAAATT---------------TGG------AAA---GGTGAAGCATCAAAACTAGCAGCGTCT------GCT---GGTGGAGCT---GTT---CTT---TCT---GCT---CAC---AAA---ACACTT---GTAAAATTTGTCGTAATC---------------------------------------------------------------GGATGG---------GCCATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------ILTVPLMCVEFYLILKA---A--GATK-QL------------MWK-LILLSTVMLVAGYFGE---G------V--YT------------------G---G---------NGP------ALW-GLISGLAYFAIVYEI-----W--K-GEASKLAAS--A-GGA-V-L-S-A-H-K-TL-VKFVVI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-MS024]_FJ560763 [II-CFB-MS024] HEL18_env_samples_FJ560763 gi|223868673|gb|FJ560763| Uncultured microorganism clone HEL18 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL18 putative proteorhodopsin gene, partial cds FJ560763 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTACCATTAATGTGTGTTGAATTTTATTTAATTCTTAGAGCTGCCAGTGCAACAAAAAAATTGATGTGGCGTATGATTCTCCTTTCAGTTATTATGTTGGTTACTGGTTATTTAGGAGAAGCTGTATACACTTCAGGCGCTCAACCAGCAATCTGGGGACTTGTATCAGGTCTTGCTTATTTTGCTATCGTATATGACATCTACATGGGTGAGGCTAAGAAATTAGCTGTTGCTGCTGGAGGTGCTGTAGAAGAAGCACACAACACTCTTGTTAAG TVPLMCVEFYLILRAASATKKLMWRMILLSVIMLVTGYLGEAVYTSGAQPAIWGLVSGLAYFAIVYDIYMGEAKKLAVAAGGAVEEAHNTLVK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTACCATTAATGTGTGTTGAATTTTATTTAATTCTTAGAGCT---------GCC------AGTGCAACAAAA---AAATTG------------------------------------ATGTGGCGT---ATGATTCTCCTTTCAGTTATTATGTTGGTTACTGGTTATTTAGGAGAA---------GCT------------------GTA------TACACT------------------------------------------------------TCA---------GGC---------------------------GCTCAACCA------------------GCAATCTGG---GGACTTGTATCAGGTCTTGCTTATTTTGCTATCGTATATGACATC---------------TAC------ATG---GGTGAGGCTAAGAAATTAGCTGTTGCT------GCT---GGAGGTGCT---GTA---GAA---GAA---GCA---CAC---AAC---ACTCTT---GTTAAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLMCVEFYLILRA---A--SATK-KL------------MWR-MILLSVIMLVTGYLGE---A------V--YT------------------S---G---------AQP------AIW-GLVSGLAYFAIVYDI-----Y--M-GEAKKLAVA--A-GGA-V-E-E-A-H-N-TL-VK------------------------------------------------------------------------------------------------------------------------------------ [II-CFB-MS024]_FJ560765 [II-CFB-MS024] HEL20_env_samples_FJ560765 gi|223868677|gb|FJ560765| Uncultured microorganism clone HEL20 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL20 putative proteorhodopsin gene, partial cds FJ560765 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTACCATTAATGTGTGTTGAATTTTATTTAATTCTTAGAGCTGCCAGTGCAACAAAAAAATTGATGTGGCGTATGATTCTCCTTTCAGTTATTATGTTGGTTACTGGTTATTTAGGAGAAGCTGTATACACTTCAGGCGCTCAACCAGCAATCTGGGGACTTGTATCAGGTCTTGCTTATTTTGCTATCGTATATGACATCTACATGGGTGAGGCTAAGAAATTAGCTGTTGCTGCTGGAGGTGCTGTAGAAGCAAGCACGGACAACACTCTTGTTAAG TVPLMCVEFYLILRAASATKKLMWRMILLSVIMLVTGYLGEAVYTSGAQPAIWGLVSGLAYFAIVYDIYMGEAKKLAVAAGGAVEASTDNTLVK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTACCATTAATGTGTGTTGAATTTTATTTAATTCTTAGAGCT---------GCC------AGTGCAACAAAA---AAATTG------------------------------------ATGTGGCGT---ATGATTCTCCTTTCAGTTATTATGTTGGTTACTGGTTATTTAGGAGAA---------GCT------------------GTA------TACACT------------------------------------------------------------------------------------------------TCAGGCGCT------------CAACCAGCAATCTGG---GGACTTGTATCAGGTCTTGCTTATTTTGCTATCGTATATGACATC---------------TAC------ATG---GGTGAGGCTAAGAAATTAGCTGTTGCT------GCT---GGAGGTGCT---GTA---GAA---GCA---AGCACGGAC---AAC---ACTCTT---GTTAAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLMCVEFYLILRA---A--SATK-KL------------MWR-MILLSVIMLVTGYLGE---A------V--YT--------------------------------SGA----QPAIW-GLVSGLAYFAIVYDI-----Y--M-GEAKKLAVA--A-GGA-V-E-A-STD-N-TL-VK------------------------------------------------------------------------------------------------------------------------------------ [II-CFB-MS024]_JX863172 [II-CFB-MS024] MALINA_OTU12_079_M_env_samples_JX863172 gi|425477294|gb|JX863172| Uncultured bacterium clone MALINA OTU12 079 M putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU12 079 M putative proteorhodopsin gene, partial cds JX863172 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 08Aug2009 70m_depth Arctic Ocean marine 70.8 -133.73 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGGTATTAACAGTGCCGTTAATGTGCGTTGAGTTCTATCTAATTTTAAGGGCTGCAGGTGCAACAAAAAGCCTAATGTGGAAAATGATATTCCTATCGGTTGTTATGCTTGTAACAGGTTATTTAGGAGAAGCTGTTTACAATACAGGTATGGGACCAGCTGTATGGGGAGCACTCTCTGGTGCAGCATATTTCGCTATAGTTTGGGAAATATGGAAAGGTGGAGCTGCTCAGTTAGCGCAAGCTGCTGGTGGCGCAGTTCAATCAGCTCACAATACATTACTCAAGTTTGTAGTCATA WVLTVPLMCVEFYLILRAAGATKSLMWKMIFLSVVMLVTGYLGEAVYNTGMGPAVWGALSGAAYFAIVWEIWKGGAAQLAQAAGGAVQSAHNTLLKFVVI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------GTATTAACAGTGCCGTTAATGTGCGTTGAGTTCTATCTAATTTTAAGGGCT---------GCA------GGTGCAACAAAA---AGCCTA------------------------------------ATGTGGAAA---ATGATATTCCTATCGGTTGTTATGCTTGTAACAGGTTATTTAGGAGAA---------GCT------------------GTT------TACAAT------------------------------------------------------ACA---------GGT---------------------------ATGGGACCA------------------GCTGTATGG---GGAGCACTCTCTGGTGCAGCATATTTCGCTATAGTTTGGGAAATA---------------TGG------AAA---GGTGGAGCTGCTCAGTTAGCGCAAGCT------GCT---GGTGGCGCA---GTT---CAA---TCA---GCT---CAC---AAT---ACATTA---CTCAAGTTTGTAGTCATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------VLTVPLMCVEFYLILRA---A--GATK-SL------------MWK-MIFLSVVMLVTGYLGE---A------V--YN------------------T---G---------MGP------AVW-GALSGAAYFAIVWEI-----W--K-GGAAQLAQA--A-GGA-V-Q-S-A-H-N-TL-LKFVVI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ926155 [II-CFB-MS024] BOUM_OTU068_env_samples gb|KJ926155| Uncultured bacterium clone BOUM OTU068 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU068 putative proteorhodopsin gene, partial cds KJ926155 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump E97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 39.0995 5.3403333 #na #na #na #na #na GTCGAATGGGTGTTGACAGTACCTTTGATGTGCGTTGAGTTTTATTTAATCTTAAAAGCTGCTGGTGCAACAAAAGGATTGATGTGGAAAATGATTTTCGCTTCTGTCGTTATGCTTGTAACTGGATATTTTGGTGAAGCTGTTTACACAACTGGTGCAGGTCCTGCTGCTTGGGGAGCTCTTTCTGGTGCTGCTTACTTCTACATTTTGTATGAAGTATGGGCTGGAGGTGCTGCTAAGCTAGCTGCCGCTGCTGGTGGAGCTGTTCAAAGCGCACACCAAACACTTGTTAAGTTTGTGTTTATAGGCTGGGCTATATAC VEWVLTVPLMCVEFYLILKAAGATKGLMWKMIFASVVMLVTGYFGEAVYTTGAGPAAWGALSGAAYFYILYEVWAGGAAKLAAAAGGAVQSAHQTLVKFVFIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCGAATGG------------------------GTGTTGACAGTACCTTTGATGTGCGTTGAGTTTTATTTAATCTTAAAAGCT---------GCT------GGTGCAACAAAA---GGATTG------------------------------------ATGTGGAAA---ATGATTTTCGCTTCTGTCGTTATGCTTGTAACTGGATATTTTGGTGAA---------GCT------------------GTT------TACACA------------------------------------------------------ACT---------GGT---------------------------GCAGGTCCT------------------GCTGCTTGG---GGAGCTCTTTCTGGTGCTGCTTACTTCTACATTTTGTATGAAGTA---------------TGG------GCT---GGAGGTGCTGCTAAGCTAGCTGCCGCT------GCT---GGTGGAGCT---GTT---CAA---AGC---GCA---CAC---CAA---ACACTT---GTTAAGTTTGTGTTTATA---------------------------------------------------------------GGCTGG---------GCTATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VEW--------VLTVPLMCVEFYLILKA---A--GATK-GL------------MWK-MIFASVVMLVTGYFGE---A------V--YT------------------T---G---------AGP------AAW-GALSGAAYFYILYEV-----W--A-GGAAKLAAA--A-GGA-V-Q-S-A-H-Q-TL-VKFVFI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-MS024]_1105122563720 [II-CFB-MS024] JCVI_ORF_1105122563720_GS030_Warm_Seep_19m jcvi|1105122563720| 1105122563720 JCVI ORF 1105122563720 1105122563720 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 09-FEB-2004 Warm_Seep/19m_depth/S_n.a/GS030/Warm_seep/Roca_Redonda/Galapagos_Islands Red Sea marine 0.27222222 -91.63333 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATAATTGATTTAATCATGGAAAAAATTCTAAGCTTAATGACTGTAGCGCCAGCGATGGCCACAGATGACTATGTAGGATTTACATTCTTCGTAGGTTGTATGGCGATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAGCAAATGGAAAACTTCTATTTTGGTGTCAGGTTTAATTACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCTACAAATGCAACATCCCCAACATTCTTTAGATACGTTGATTGGGTGTTAACAGTGCCTCTAATGTGTGTTGAATTTTATTTAATACTTAAAGCAGCCGGTGCTACTCAAAAACTTATGTGGCAGATGATTTTTGCTTCTGTTGTAATGTTAGTATGTGGTTACTTCGGTGAAGCTGTTTATACTACAGGTTCAGGACCAGCCCTATGGGGATTAGTTTCAGGTATCGCATACTTTTACATTGTATATGAAATTTGGATGGGTGGTGCTTCTAAGCTAGCTGCTTCGGCTGGCGGAGCAGTACAGTCTGCGCATAAAACTCTTTGTAAATTCGTCTTAATTGGCTGGGCAATTTATCCAATTGGATATATGGCTGGGACAGAAGGATGGTATAGTGGAATTTTTGGTGGTCTTCCAATGGACGTAGTTTACAATATTGGAGATGCTATAAATAAGATTGGTTTTGGTTTAGTAGTTTACAACTTAGCTGTCCAATCTAAA IIDLIMEKILSLMTVAPAMATDDYVGFTFFVGCMAMMAASAFFFLSMNSFDSKWKTSILVSGLITFIAAVHYWYMRDYWATNATSPTFFRYVDWVLTVPLMCVEFYLILKAAGATQKLMWQMIFASVVMLVCGYFGEAVYTTGSGPALWGLVSGIAYFYIVYEIWMGGASKLAASAGGAVQSAHKTLCKFVLIGWAIYPIGYMAGTEGWYSGIFGGLPMDVVYNIGDAINKIGFGLVVYNLAVQSK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATTGATTTAATCATGGAAAAAATTCTAAGCTTAATGACTGTAGCGCCAGCGATGGCCACAGATGACTATGTAGGATTTACATTCTTCGTAGGTTGTATGGCGATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAGCAAATGGAAAACTTCTATTTTGGTGTCAGGTTTAATTACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCT---------------------------------------------------ACAAATGCAACATCCCCAACATTCTTTAGATACGTTGATTGG------------------------GTGTTAACAGTGCCTCTAATGTGTGTTGAATTTTATTTAATACTTAAAGCA---------GCC------GGTGCTACTCAA---AAACTT------------------------------------ATGTGGCAG---ATGATTTTTGCTTCTGTTGTAATGTTAGTATGTGGTTACTTCGGTGAA---------GCT------------------GTT------TATACT------------------------------------------------------ACA---------GGT---------------------------TCAGGACCA------------------GCCCTATGG---GGATTAGTTTCAGGTATCGCATACTTTTACATTGTATATGAAATT---------------TGG------ATG---GGTGGTGCTTCTAAGCTAGCTGCTTCG------GCT---GGCGGAGCA---GTA---CAG---TCT---GCG---CAT---AAA---ACTCTT---TGTAAATTCGTCTTAATT---------------------------------------------------------------GGCTGG---------GCAATTTATCCAATTGGATATATGGCTGGGACAGAAGGA---TGGTAT---------AGT---GGAATTTTTGGTGGTCTTCCA---------------------ATGGACGTAGTTTACAATATTGGAGATGCTATAAATAAGATTGGTTTTGGTTTAGTAGTTTACAACTTAGCTGTCCAATCTAAA--------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------IIDLIMEKILSLMTVAPAMATDDYVGFTFFVGCMAMMAASAFFFLSMNSFDSKWKTSILVSGLITFIAAVHYWYMRDYWA-----------------TNATSPTFFRYVDW--------VLTVPLMCVEFYLILKA---A--GATQ-KL------------MWQ-MIFASVVMLVCGYFGE---A------V--YT------------------T---G---------SGP------ALW-GLVSGIAYFYIVYEI-----W--M-GGASKLAAS--A-GGA-V-Q-S-A-H-K-TL-CKFVLI---------------------GW---AIYPIGYMAGTEG-WY---S-GIFGGLP-------MDVVYNIGDAINKIGFGLVVYNLAVQSK--------------------------------------- [II-CFB-MS024]_EU683506 [II-CFB-MS024] A110010_env_samples_EU683506 gi|187711485|gb|EU683506| Uncultured bacterium clone A110010 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A110010 putative proteorhodopsin gene, partial cds EU683506 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_100m_depth China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCTGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACTTCTATTTTGGTGTCAGGTCTAATAACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCAACCAATGCAACCTCACCAACATTCTTTAGATATGTTGACTGGATATTAACCGTACCACTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCAGCTGGCGCAACAAAGCAGTTAATGTGGAAAATGATTTTTGCTTCTGCAGTTATGCTAGTTACTGGTTACTTTGGTGAA AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWATNATSPTFFRYVDWILTVPLMCVEFYLILKAAGATKQLMWKMIFASAVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCTGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACTTCTATTTTGGTGTCAGGTCTAATAACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCA---------------------------------------------------ACCAATGCAACCTCACCAACATTCTTTAGATATGTTGACTGG------------------------ATATTAACCGTACCACTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCA---------GCT------GGCGCAACAAAG---CAGTTA------------------------------------ATGTGGAAA---ATGATTTTTGCTTCTGCAGTTATGCTAGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWA-----------------TNATSPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GATK-QL------------MWK-MIFASAVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_EU683511 [II-CFB-MS024] A110038_env_samples_EU683511 gi|187711495|gb|EU683511| Uncultured bacterium clone A110038 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A110038 putative proteorhodopsin gene, partial cds EU683511 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_100m_depth China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACTTCTATTTTGGTGTCAGGTCTAATAACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCAACCAATGCAACCTCACCAACATTCTTTAGATATGTTGACTGGATATTAACCGTACCACTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCAGCTGGCGCAACAAAGCAGTTAATGTGGAAAATGATTTTTGCTTCTGCAGTTATGCTAGTTACTGGATACTTTGGTGAA AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWATNATSPTFFRYVDWILTVPLMCVEFYLILKAAGATKQLMWKMIFASAVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACTTCTATTTTGGTGTCAGGTCTAATAACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCA---------------------------------------------------ACCAATGCAACCTCACCAACATTCTTTAGATATGTTGACTGG------------------------ATATTAACCGTACCACTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCA---------GCT------GGCGCAACAAAG---CAGTTA------------------------------------ATGTGGAAA---ATGATTTTTGCTTCTGCAGTTATGCTAGTTACTGGATACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWA-----------------TNATSPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GATK-QL------------MWK-MIFASAVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_EU683571 [II-CFB-MS024] W808_env_samples_EU683571 gi|187711615|gb|EU683571| Uncultured bacterium clone W808 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W808 putative proteorhodopsin gene, partial cds EU683571 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_surface_water_[2m] China Sea marine 30.5 125.52 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACTTCTATTTTGGTGTCAGGTCTAATAGCGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCAACCAATGCAACCTCACCAACATTCTTTAGATATGTTGACTGGATATTAACCGTACCACTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCAGCTGGCGCAACAAAACAGTTAATGTGGAAAATGATTTTTGCTTCTGCAGTTATGCTAGTTACTGGTTACTTTGGTGAA AMMAASAFFFLSMNSFDNKWKTSILVSGLIAFIAAVHYWYMRDYWATNATSPTFFRYVDWILTVPLMCVEFYLILKAAGATKQLMWKMIFASAVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACTTCTATTTTGGTGTCAGGTCTAATAGCGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCA---------------------------------------------------ACCAATGCAACCTCACCAACATTCTTTAGATATGTTGACTGG------------------------ATATTAACCGTACCACTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCA---------GCT------GGCGCAACAAAA---CAGTTA------------------------------------ATGTGGAAA---ATGATTTTTGCTTCTGCAGTTATGCTAGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDNKWKTSILVSGLIAFIAAVHYWYMRDYWA-----------------TNATSPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GATK-QL------------MWK-MIFASAVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_EU683519 [II-CFB-MS024] A120015_env_samples_EU683519 gi|187711511|gb|EU683519| Uncultured bacterium clone A120015 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A120015 putative proteorhodopsin gene, partial cds EU683519 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_200m_depth China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACTTCTATTTTGGTGTCAGGTCTAATAACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCAACCAATGCAACCTCACCAACATTCTTTAGATATGTTGACTGGATATTAACCGTACCACTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCAGCTGGCGCAACAAAACAGTTAATGTGGAAAATGATTTTTGCTTCTGCAGTTATGCTAGTTACTGGTTACTTTGGTGAA AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWATNATSPTFFRYVDWILTVPLMCVEFYLILKAAGATKQLMWKMIFASAVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACTTCTATTTTGGTGTCAGGTCTAATAACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCA---------------------------------------------------ACCAATGCAACCTCACCAACATTCTTTAGATATGTTGACTGG------------------------ATATTAACCGTACCACTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCA---------GCT------GGCGCAACAAAA---CAGTTA------------------------------------ATGTGGAAA---ATGATTTTTGCTTCTGCAGTTATGCTAGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWA-----------------TNATSPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GATK-QL------------MWK-MIFASAVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_EU683539 [II-CFB-MS024] A907_02_env_samples_EU683539 gi|187711551|gb|EU683539| Uncultured bacterium clone A907 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A907 putative proteorhodopsin gene, partial cds EU683539 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_surface_water_[2m] China Sea marine 22 114 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACTTCTATTTTGGTGTCAGGTCTAATAACGTTCATTGCAGCAGTACACTATTGGTATGTGCGTGACTATTGGGCAACCAATGCAACCTCACCAACATTCTTTAGATATGTTGACTGGATATTAACCGTACCACTAATGTGTGTTGAATTTTACCCGATCCTAAAAGCAGCTGGCGCAACAAAACAGTTAATGTGGAAAATGATTTTTGCTTCTGCAGTTATGCTAGTAACTGGTTACTTTGGTGAA AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYVRDYWATNATSPTFFRYVDWILTVPLMCVEFYPILKAAGATKQLMWKMIFASAVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACTTCTATTTTGGTGTCAGGTCTAATAACGTTCATTGCAGCAGTACACTATTGGTATGTGCGTGACTATTGGGCA---------------------------------------------------ACCAATGCAACCTCACCAACATTCTTTAGATATGTTGACTGG------------------------ATATTAACCGTACCACTAATGTGTGTTGAATTTTACCCGATCCTAAAAGCA---------GCT------GGCGCAACAAAA---CAGTTA------------------------------------ATGTGGAAA---ATGATTTTTGCTTCTGCAGTTATGCTAGTAACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYVRDYWA-----------------TNATSPTFFRYVDW--------ILTVPLMCVEFYPILKA---A--GATK-QL------------MWK-MIFASAVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_EU683520 [II-CFB-MS024] A120024_env_samples_EU683520 gi|187711513|gb|EU683520| Uncultured bacterium clone A120024 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A120024 putative proteorhodopsin gene, partial cds EU683520 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_200m_depth China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACTTCTATTTTGGTGTCAGGTCTAATAACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCAACCAATGCAACCTCACCAACATTCTTTAGATATGTTGACTGGATATTAACCGTACCACTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCAGCTGGCGCAACAAAACAGTTAATGTGGAAAATGATTTTTGCTTCTGCAGTTATGCTAGTTACTGGTTACTTTGGTGAA AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWATNATSPTFFRYVDWILTVPLMCVEFYLILKAAGATKQLMWKMIFASAVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACTTCTATTTTGGTGTCAGGTCTAATAACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCA---------------------------------------------------ACCAATGCAACCTCACCAACATTCTTTAGATATGTTGACTGG------------------------ATATTAACCGTACCACTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCA---------GCT------GGCGCAACAAAA---CAGTTA------------------------------------ATGTGGAAA---ATGATTTTTGCTTCTGCAGTTATGCTAGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWA-----------------TNATSPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GATK-QL------------MWK-MIFASAVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_EU683508 [II-CFB-MS024] A110034_env_samples_EU683508 gi|187711489|gb|EU683508| Uncultured bacterium clone A110034 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A110034 putative proteorhodopsin gene, partial cds EU683508 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_100m_depth China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACTTCTATTTTGGTGTCAGGTCTAATAACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCAACCAATGCGACCTCACCAACATTCTTTAGATATGTTGACTGGATATTAACCGTACCACTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCAGCTGGCGCAACAAAACAGTTAATGTGGAAAATGATTTTTGCTTCTGCAGTTATGCTAGTTACTGGATACTTTGGTGAA AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWATNATSPTFFRYVDWILTVPLMCVEFYLILKAAGATKQLMWKMIFASAVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACTTCTATTTTGGTGTCAGGTCTAATAACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCA---------------------------------------------------ACCAATGCGACCTCACCAACATTCTTTAGATATGTTGACTGG------------------------ATATTAACCGTACCACTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCA---------GCT------GGCGCAACAAAA---CAGTTA------------------------------------ATGTGGAAA---ATGATTTTTGCTTCTGCAGTTATGCTAGTTACTGGATACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWA-----------------TNATSPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GATK-QL------------MWK-MIFASAVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_EU683586 [II-CFB-MS024] W83013_env_samples_EU683586 gi|187711645|gb|EU683586| Uncultured bacterium clone W83013 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W83013 putative proteorhodopsin gene, partial cds EU683586 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_30m_depth China Sea marine 30.5 125.52 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACTTCTATTTTGGTGTCAGGTCTAATAACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCAACCAATGCAACCTCACCAACATTCTTTAGATATGTTGACTGGATATTAACCGTACCACTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCAGCTGGCGCAACAAAACAGTTAATGTGGAAAATGATTTTTGCTTCTGCAGTTATGCTAGTTACTGGATACTTTGGTGAA AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWATNATSPTFFRYVDWILTVPLMCVEFYLILKAAGATKQLMWKMIFASAVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACTTCTATTTTGGTGTCAGGTCTAATAACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCA---------------------------------------------------ACCAATGCAACCTCACCAACATTCTTTAGATATGTTGACTGG------------------------ATATTAACCGTACCACTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCA---------GCT------GGCGCAACAAAA---CAGTTA------------------------------------ATGTGGAAA---ATGATTTTTGCTTCTGCAGTTATGCTAGTTACTGGATACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWA-----------------TNATSPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GATK-QL------------MWK-MIFASAVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_EU683514 [II-CFB-MS024] A12001_env_samples_EU683514 gi|187711501|gb|EU683514| Uncultured bacterium clone A12001 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A12001 putative proteorhodopsin gene, partial cds EU683514 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_200m_depth China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACTTCTATTTTGGTGTCAGGTCTAATAACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCAACCAATGCAACCTCACCAACATTCTTTAGATATGTTGACTGGATATTAACCGTACCACTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCAGCTGGCGCAACAAAACAGTTAATGTGGAAAATGATTTTTGCTTCTGCAGTTATGCTAGTTACTGGTTACTTTGGTGAA AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWATNATSPTFFRYVDWILTVPLMCVEFYLILKAAGATKQLMWKMIFASAVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACTTCTATTTTGGTGTCAGGTCTAATAACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCA---------------------------------------------------ACCAATGCAACCTCACCAACATTCTTTAGATATGTTGACTGG------------------------ATATTAACCGTACCACTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCA---------GCT------GGCGCAACAAAA---CAGTTA------------------------------------ATGTGGAAA---ATGATTTTTGCTTCTGCAGTTATGCTAGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWA-----------------TNATSPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GATK-QL------------MWK-MIFASAVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_EU683543 [II-CFB-MS024] A9013_02_env_samples_EU683543 gi|187711559|gb|EU683543| Uncultured bacterium clone A9013 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A9013 putative proteorhodopsin gene, partial cds EU683543 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_surface_water_[2m] China Sea marine 22 114 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACCTCTATTTTGGTGTCAGGTCTGATAACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCAACCAATGCAACCTCACCAACATTCTTTAGATATGTTGACTGGATACTAACGGTACCACTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCAGCTGGCGCAACAAAACAGTTAATGTGGAAAATGATTTTTGCTTCTGCAGTTATGCTAGTAACTGGTTACTTTGGTGAA AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWATNATSPTFFRYVDWILTVPLMCVEFYLILKAAGATKQLMWKMIFASAVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACCTCTATTTTGGTGTCAGGTCTGATAACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCA---------------------------------------------------ACCAATGCAACCTCACCAACATTCTTTAGATATGTTGACTGG------------------------ATACTAACGGTACCACTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCA---------GCT------GGCGCAACAAAA---CAGTTA------------------------------------ATGTGGAAA---ATGATTTTTGCTTCTGCAGTTATGCTAGTAACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWA-----------------TNATSPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GATK-QL------------MWK-MIFASAVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_EU683537 [II-CFB-MS024] A904_02_env_samples_EU683537 gi|187711547|gb|EU683537| Uncultured bacterium clone A904 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A904 putative proteorhodopsin gene, partial cds EU683537 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_surface_water_[2m] China Sea marine 22 114 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCTGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACCTCTATTTTGGTGTCAGGTCTGATAACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCAACCAATGCAACCTCACCAACATTCTTTAGATATGTTGACTGGATACTAACGGTACCACTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCAGCTGGCGCAACAAAACAGTTAATGTGGAAAATGATTTTTGCTTCTGCAGTTATGCTAGTAACTGGTTACTTTGGGAAT AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWATNATSPTFFRYVDWILTVPLMCVEFYLILKAAGATKQLMWKMIFASAVMLVTGYFGN ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCTGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACCTCTATTTTGGTGTCAGGTCTGATAACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCA---------------------------------------------------ACCAATGCAACCTCACCAACATTCTTTAGATATGTTGACTGG------------------------ATACTAACGGTACCACTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCA---------GCT------GGCGCAACAAAA---CAGTTA------------------------------------ATGTGGAAA---ATGATTTTTGCTTCTGCAGTTATGCTAGTAACTGGTTACTTTGGGAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWA-----------------TNATSPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GATK-QL------------MWK-MIFASAVMLVTGYFGN----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_EU683542 [II-CFB-MS024] A9012_02_env_samples_EU683542 gi|187711557|gb|EU683542| Uncultured bacterium clone A9012 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A9012 putative proteorhodopsin gene, partial cds EU683542 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_surface_water_[2m] China Sea marine 22 114 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACCTCTATTTTGGTGTCAGGTCTGATAACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCAACCAATGCAACCTCACCAACATTCTTTAGATATGTTGACTGGATACTAACGGTACCACTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCAGCTGGCGCAACAAAACAGTTAATGTGGAAAATGATTTTTGCTTCTGCAGTTATGCTAGTTACTGGTTACTTTGGTGAA AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWATNATSPTFFRYVDWILTVPLMCVEFYLILKAAGATKQLMWKMIFASAVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACCTCTATTTTGGTGTCAGGTCTGATAACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCA---------------------------------------------------ACCAATGCAACCTCACCAACATTCTTTAGATATGTTGACTGG------------------------ATACTAACGGTACCACTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCA---------GCT------GGCGCAACAAAA---CAGTTA------------------------------------ATGTGGAAA---ATGATTTTTGCTTCTGCAGTTATGCTAGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWA-----------------TNATSPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GATK-QL------------MWK-MIFASAVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_EU683482 [II-CFB-MS024] A103_3_env_samples_EU683482 gi|187711437|gb|EU683482| Uncultured bacterium clone A103 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A103 putative proteorhodopsin gene, partial cds EU683482 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_surface_water_[2m] China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACGAATGGAAAACCTCTATTTTGGTGTCAGGTCTGATAACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCAACCAATGCAACCTCACCAACATTCTTTAGATATGTTGACTGGATACTAACGGTACCACTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCAGCTGGCGCAACAAAACAGTTAATGTGGAAAATGATTTTTGCTTCTGCAGTTATGCTAGTAACTGGTTACTTTGGTGAA AMMAASAFFFLSMNSFDNEWKTSILVSGLITFIAAVHYWYMRDYWATNATSPTFFRYVDWILTVPLMCVEFYLILKAAGATKQLMWKMIFASAVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACGAATGGAAAACCTCTATTTTGGTGTCAGGTCTGATAACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCA---------------------------------------------------ACCAATGCAACCTCACCAACATTCTTTAGATATGTTGACTGG------------------------ATACTAACGGTACCACTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCA---------GCT------GGCGCAACAAAA---CAGTTA------------------------------------ATGTGGAAA---ATGATTTTTGCTTCTGCAGTTATGCTAGTAACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDNEWKTSILVSGLITFIAAVHYWYMRDYWA-----------------TNATSPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GATK-QL------------MWK-MIFASAVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_EU683533 [II-CFB-MS024] A905_3_env_samples_EU683533 gi|187711539|gb|EU683533| Uncultured bacterium clone A905 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A905 putative proteorhodopsin gene, partial cds EU683533 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_surface_water_[2m] China Sea marine 22 114 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTTAATGAACTCATTTGATAACAAATGGAAAACTTCTATTTTGGTGTCAGGTCTGATAACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCAACCAATGCAACCTCACCAACATTCTTTAGATATGTTGATTGGATACTAACGGTACCACTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCAGCTGGCGCAACAAAGCAGTTAATGTGGAAAATGATTTTTGCTTCTGCAGTTATGCTAGTAACTGGTTACTCTCTAGAG AMMAASAFFFLLMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWATNATSPTFFRYVDWILTVPLMCVEFYLILKAAGATKQLMWKMIFASAVMLVTGYSLE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTTAATGAACTCATTTGATAACAAATGGAAAACTTCTATTTTGGTGTCAGGTCTGATAACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCA---------------------------------------------------ACCAATGCAACCTCACCAACATTCTTTAGATATGTTGATTGG------------------------ATACTAACGGTACCACTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCA---------GCT------GGCGCAACAAAG---CAGTTA------------------------------------ATGTGGAAA---ATGATTTTTGCTTCTGCAGTTATGCTAGTAACTGGTTACTCTCTAGAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLLMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWA-----------------TNATSPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GATK-QL------------MWK-MIFASAVMLVTGYSLE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_EU683476 [II-CFB-MS024] A07_02_env_samples_EU683476 gi|187711425|gb|EU683476| Uncultured bacterium clone A07 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A07 putative proteorhodopsin gene, partial cds EU683476 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_surface_water_[2m] China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACTTCTATTTTGGTGTCAGGTCTAATAACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCAACCAATGCAACTTCACCAACATTCTTTAGATATGTTGACTGGATTTTAACGGTACCATTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCAGCTGGCGCAACAAAACAGTTAATGTGGAAAATGATTTTTGCTTCCGCAGTTATGCTAGTTACTGGATACTTTGGTGAA AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWATNATSPTFFRYVDWILTVPLMCVEFYLILKAAGATKQLMWKMIFASAVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACTTCTATTTTGGTGTCAGGTCTAATAACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCA---------------------------------------------------ACCAATGCAACTTCACCAACATTCTTTAGATATGTTGACTGG------------------------ATTTTAACGGTACCATTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCA---------GCT------GGCGCAACAAAA---CAGTTA------------------------------------ATGTGGAAA---ATGATTTTTGCTTCCGCAGTTATGCTAGTTACTGGATACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWA-----------------TNATSPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GATK-QL------------MWK-MIFASAVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_EU683477 [II-CFB-MS024] A108_02_env_samples_EU683477 gi|187711427|gb|EU683477| Uncultured bacterium clone A108 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A108 putative proteorhodopsin gene, partial cds EU683477 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_surface_water_[2m] China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACTTCTATTTTGGTGTCAGGTCTAATAACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCAACCAATGCAACTTCACCAACATTCTTTAGATATGTTGACTGGATTTTAACGGTACCATTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCAGCTGGCGCAACAAAACAGTTAATGTGGAAAATGATTTTTGCTTCCGCAGTTATGCTAGTTACTGGATACTTTGGTGAA AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWATNATSPTFFRYVDWILTVPLMCVEFYLILKAAGATKQLMWKMIFASAVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACTTCTATTTTGGTGTCAGGTCTAATAACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCA---------------------------------------------------ACCAATGCAACTTCACCAACATTCTTTAGATATGTTGACTGG------------------------ATTTTAACGGTACCATTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCA---------GCT------GGCGCAACAAAA---CAGTTA------------------------------------ATGTGGAAA---ATGATTTTTGCTTCCGCAGTTATGCTAGTTACTGGATACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWA-----------------TNATSPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GATK-QL------------MWK-MIFASAVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_EU683540 [II-CFB-MS024] A908_02_env_samples_EU683540 gi|187711553|gb|EU683540| Uncultured bacterium clone A908 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A908 putative proteorhodopsin gene, partial cds EU683540 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_surface_water_[2m] China Sea marine 22 114 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACTTCTATTTTGGTGTCAGGTCTAATAACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCAACCAATGGAACCTCACCAACATTCTTTAGATATGTTGACTGGATATTAACTGTACCACTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCAGCTGGCGCAACAAAACAGTTAATGTGGAAAATGATTTTTGCTTCTGCAGTTATGCTAGTTACTGGTTACATTGGTGAA AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWATNGTSPTFFRYVDWILTVPLMCVEFYLILKAAGATKQLMWKMIFASAVMLVTGYIGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACTTCTATTTTGGTGTCAGGTCTAATAACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCA---------------------------------------------------ACCAATGGAACCTCACCAACATTCTTTAGATATGTTGACTGG------------------------ATATTAACTGTACCACTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCA---------GCT------GGCGCAACAAAA---CAGTTA------------------------------------ATGTGGAAA---ATGATTTTTGCTTCTGCAGTTATGCTAGTTACTGGTTACATTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWA-----------------TNGTSPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GATK-QL------------MWK-MIFASAVMLVTGYIGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_EU683501 [II-CFB-MS024] A110046_env_samples_EU683501 gi|187711475|gb|EU683501| Uncultured bacterium clone A110046 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A110046 putative proteorhodopsin gene, partial cds EU683501 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_100m_depth China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCTGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACTTCTATTTTGGTGTCAGGTCTAATAACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCAACCAATGGAACCTCACCAACATTCTTTAGATATGTTGACTGGATATTAACGGTACCACTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCAGCTGGCGCAACAAAACAGTTAATGTGGAAAATGATTTTTGCTTCTGCAGTTATGCTAGTTACTGGTTACTTTGGTGAA AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWATNGTSPTFFRYVDWILTVPLMCVEFYLILKAAGATKQLMWKMIFASAVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCTGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACTTCTATTTTGGTGTCAGGTCTAATAACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCA---------------------------------------------------ACCAATGGAACCTCACCAACATTCTTTAGATATGTTGACTGG------------------------ATATTAACGGTACCACTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCA---------GCT------GGCGCAACAAAA---CAGTTA------------------------------------ATGTGGAAA---ATGATTTTTGCTTCTGCAGTTATGCTAGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWA-----------------TNGTSPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GATK-QL------------MWK-MIFASAVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_EU683492 [II-CFB-MS024] A1608_env_samples_EU683492 gi|187711457|gb|EU683492| Uncultured bacterium clone A1608 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A1608 putative proteorhodopsin gene, partial cds EU683492 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_60m_depth China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCTGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACTTCTATTTTGGTGTCAGGTCTAATAACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGATTATTGGGCAACCAATGGAACCTCACCAACATTCTTTAGATATGTTGACTGGATATTAACGGTACCACTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCAGCTGGCGCAACAAAACAGTTAATGTGGAAAATGATTTTTGCTTCTGCAGTTATGCTAGTTACTGGTTACTTTGGTGAA AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWATNGTSPTFFRYVDWILTVPLMCVEFYLILKAAGATKQLMWKMIFASAVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCTGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACTTCTATTTTGGTGTCAGGTCTAATAACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGATTATTGGGCA---------------------------------------------------ACCAATGGAACCTCACCAACATTCTTTAGATATGTTGACTGG------------------------ATATTAACGGTACCACTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCA---------GCT------GGCGCAACAAAA---CAGTTA------------------------------------ATGTGGAAA---ATGATTTTTGCTTCTGCAGTTATGCTAGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWA-----------------TNGTSPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GATK-QL------------MWK-MIFASAVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_EU683534 [II-CFB-MS024] A9014_3_env_samples_EU683534 gi|187711541|gb|EU683534| Uncultured bacterium clone A9014 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A9014 putative proteorhodopsin gene, partial cds EU683534 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_surface_water_[2m] China Sea marine 22 114 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACTTCTATTTTGGTGTCAGGTCTAATAACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCAACCAATGGAACCTCACCAACATTCTTTAGATATGTTGACTGGGTATTAACGGTACCACTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCAGCTGGTGCAACAAAACAGTTAATGTGGAAAATGATTTTTGCTTCTGCAGTTATGCTAGTTACTGGATACTTTGGTGAA AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWATNGTSPTFFRYVDWVLTVPLMCVEFYLILKAAGATKQLMWKMIFASAVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACTTCTATTTTGGTGTCAGGTCTAATAACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCA---------------------------------------------------ACCAATGGAACCTCACCAACATTCTTTAGATATGTTGACTGG------------------------GTATTAACGGTACCACTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCA---------GCT------GGTGCAACAAAA---CAGTTA------------------------------------ATGTGGAAA---ATGATTTTTGCTTCTGCAGTTATGCTAGTTACTGGATACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWA-----------------TNGTSPTFFRYVDW--------VLTVPLMCVEFYLILKA---A--GATK-QL------------MWK-MIFASAVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_EU683526 [II-CFB-MS024] A904_03_env_samples_EU683526 gi|187711525|gb|EU683526| Uncultured bacterium clone A904 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A904 putative proteorhodopsin gene, partial cds EU683526 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_surface_water_[2m] China Sea marine 22 114 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACTTCTATTTTGGTGTCAGGTCTAATAACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCAACCAATGGAACCTCACCAACATTCTTTAGATATGTTGACTGGGTATTAACGGTACCACTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCAGCTGGTGCAACAAAACAGTTAATGTGGAAAATGATTTTTGCTTCTGCAGTTATGCTAGTAACTGGTTACTTTGGTGAA AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWATNGTSPTFFRYVDWVLTVPLMCVEFYLILKAAGATKQLMWKMIFASAVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACTTCTATTTTGGTGTCAGGTCTAATAACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCA---------------------------------------------------ACCAATGGAACCTCACCAACATTCTTTAGATATGTTGACTGG------------------------GTATTAACGGTACCACTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCA---------GCT------GGTGCAACAAAA---CAGTTA------------------------------------ATGTGGAAA---ATGATTTTTGCTTCTGCAGTTATGCTAGTAACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWA-----------------TNGTSPTFFRYVDW--------VLTVPLMCVEFYLILKA---A--GATK-QL------------MWK-MIFASAVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_EU683545 [II-CFB-MS024] A9015_02_env_samples_EU683545 gi|187711563|gb|EU683545| Uncultured bacterium clone A9015 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A9015 putative proteorhodopsin gene, partial cds EU683545 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_surface_water_[2m] China Sea marine 22 114 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCTGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACTTCTATTTTGGTGTCAGGTCTAATAACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCAACCAATGGAACCTCACCAACATTCTTTAGATATGTTGACTGGGTATTAACGGTACCACTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCAGCTGGTGCAACAAAACAGTTAATGTGGAAAATGATTTTTGCTTCTGCAGTTATGCTAGTTACTGGTTACATTGGTGAA AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWATNGTSPTFFRYVDWVLTVPLMCVEFYLILKAAGATKQLMWKMIFASAVMLVTGYIGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCTGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACTTCTATTTTGGTGTCAGGTCTAATAACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCA---------------------------------------------------ACCAATGGAACCTCACCAACATTCTTTAGATATGTTGACTGG------------------------GTATTAACGGTACCACTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCA---------GCT------GGTGCAACAAAA---CAGTTA------------------------------------ATGTGGAAA---ATGATTTTTGCTTCTGCAGTTATGCTAGTTACTGGTTACATTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWA-----------------TNGTSPTFFRYVDW--------VLTVPLMCVEFYLILKA---A--GATK-QL------------MWK-MIFASAVMLVTGYIGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_EU683518 [II-CFB-MS024] A12003_env_samples_EU683518 gi|187711509|gb|EU683518| Uncultured bacterium clone A12003 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A12003 putative proteorhodopsin gene, partial cds EU683518 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_200m_depth China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACTTCTATTTTGGTATCAGGTTTAATTACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGATTATTGGGCAACCAATGCAACTTCACCAACATTCTTTAGATATGTTGACTGGGTTTTAACAGTACCATTAATGTGTGTTGAATTTTACCTGATCCTTAAAGCAGCTGGTGCAACAAAACAGTTAATGTGGAAACTGATTTTCGCTTCTGCAGTTATGCTAGTTACTGGTTACTTTGGTGAA AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWATNATSPTFFRYVDWVLTVPLMCVEFYLILKAAGATKQLMWKLIFASAVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACTTCTATTTTGGTATCAGGTTTAATTACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGATTATTGGGCA---------------------------------------------------ACCAATGCAACTTCACCAACATTCTTTAGATATGTTGACTGG------------------------GTTTTAACAGTACCATTAATGTGTGTTGAATTTTACCTGATCCTTAAAGCA---------GCT------GGTGCAACAAAA---CAGTTA------------------------------------ATGTGGAAA---CTGATTTTCGCTTCTGCAGTTATGCTAGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWA-----------------TNATSPTFFRYVDW--------VLTVPLMCVEFYLILKA---A--GATK-QL------------MWK-LIFASAVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_EU683513 [II-CFB-MS024] A11001_env_samples_EU683513 gi|187711499|gb|EU683513| Uncultured bacterium clone A11001 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A11001 putative proteorhodopsin gene, partial cds EU683513 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_100m_depth China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGACAATAAATGGAAAACTTCTATTTTAGTGTCAGGTCTAATTACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCAACCAATGCAACCCCACCAACATTCTTCAGATATGTTGACTGGGTATTAACAGTACCACTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCAGCTGGTGCAACAAAACAGTTAATGTGGAAAATGATTTTCGCTTCTGCAGTTATGCTAGTTACTGGATACTTTGGTGAA AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWATNATPPTFFRYVDWVLTVPLMCVEFYLILKAAGATKQLMWKMIFASAVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGACAATAAATGGAAAACTTCTATTTTAGTGTCAGGTCTAATTACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCA---------------------------------------------------ACCAATGCAACCCCACCAACATTCTTCAGATATGTTGACTGG------------------------GTATTAACAGTACCACTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCA---------GCT------GGTGCAACAAAA---CAGTTA------------------------------------ATGTGGAAA---ATGATTTTCGCTTCTGCAGTTATGCTAGTTACTGGATACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWA-----------------TNATPPTFFRYVDW--------VLTVPLMCVEFYLILKA---A--GATK-QL------------MWK-MIFASAVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_EU683544 [II-CFB-MS024] A9014_02_env_samples_EU683544 gi|187711561|gb|EU683544| Uncultured bacterium clone A9014 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A9014 putative proteorhodopsin gene, partial cds EU683544 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_surface_water_[2m] China Sea marine 22 114 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCTGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGACAATAAATGGAAAACTTCTATTTTAGTGTCAGGTCTAATTACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCAACCAATGCAACCTCACCAACATTCTTCAGATATGTTGACTGGGTATTAACAGTACCACTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCAGCTGGTGCAACAAAACAGTTAATGTGGAAAATGATTTTCGCTTCTGCAGTTATGCTAGTTACTGGTTACATTGGTGAA AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWATNATSPTFFRYVDWVLTVPLMCVEFYLILKAAGATKQLMWKMIFASAVMLVTGYIGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCTGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGACAATAAATGGAAAACTTCTATTTTAGTGTCAGGTCTAATTACGTTCATTGCAGCAGTACACTATTGGTATATGCGTGACTATTGGGCA---------------------------------------------------ACCAATGCAACCTCACCAACATTCTTCAGATATGTTGACTGG------------------------GTATTAACAGTACCACTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCA---------GCT------GGTGCAACAAAA---CAGTTA------------------------------------ATGTGGAAA---ATGATTTTCGCTTCTGCAGTTATGCTAGTTACTGGTTACATTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWA-----------------TNATSPTFFRYVDW--------VLTVPLMCVEFYLILKA---A--GATK-QL------------MWK-MIFASAVMLVTGYIGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_EU683493 [II-CFB-MS024] A1609_env_samples_EU683493 gi|187711459|gb|EU683493| Uncultured bacterium clone A1609 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A1609 putative proteorhodopsin gene, partial cds EU683493 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_60m_depth China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCTGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACTTCTATTTTGGTTTCAGGTTTAATTACGTTCATTGCAGCAGTACACTATTGGTACATGCGTGACTATTGGGCAACCAATGCAACCTCACCAACATTCTTCAGATATGTTGACTGGGTATTAACGGTACCGCTAATGTGTGTTGAATTTTACCTGATCCTTAAGGCAGCTGGTGCAACAAAACAGTTAATGTGGAAAATGATTTTCGCTTCTGCGGTTATGCTAGTAACTGGTTACTTTGGTGAA AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWATNATSPTFFRYVDWVLTVPLMCVEFYLILKAAGATKQLMWKMIFASAVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCTGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACTTCTATTTTGGTTTCAGGTTTAATTACGTTCATTGCAGCAGTACACTATTGGTACATGCGTGACTATTGGGCA---------------------------------------------------ACCAATGCAACCTCACCAACATTCTTCAGATATGTTGACTGG------------------------GTATTAACGGTACCGCTAATGTGTGTTGAATTTTACCTGATCCTTAAGGCA---------GCT------GGTGCAACAAAA---CAGTTA------------------------------------ATGTGGAAA---ATGATTTTCGCTTCTGCGGTTATGCTAGTAACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWA-----------------TNATSPTFFRYVDW--------VLTVPLMCVEFYLILKA---A--GATK-QL------------MWK-MIFASAVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_1105160748890 [II-CFB-MS024] JCVI_ORF_1105160748890_GS017_Open_Ocean_2m jcvi|1105160748890| 1105160748890 JCVI ORF 1105160748890 1105160748890 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 09-janv-04 Open_Ocean/2m_depth/S_35.8_psu/GS017/Yucatan_Channel/Caribbean_Sea Caribbean Sea marine 20.5225 -85.41361 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATAATTGATTTAATCATGGAAAAAATTCTTAGCTTAATGACTGTAGCGCCAGCGATGGCCACAGACGACTACGTTGGATTTACTTTCTTCGTAGGATGTATGGCGATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTCGATAGTAAATGGAAAACCTCCATTCTAGTATCTGGATTAATTACGTTCATTGCAGCAGTACACTACTGGTACATGAGAGACTACTGGGCAACTAATGCAACATCCCCAACTTTCTTTAGGTATGTTGACTGGGTCCTTACTGTCCCTCTAATGTGTGTTGAATTCTATTTAATTCTTAAAGCAGCAGGTGCAACTAAAACTTTAATGTGGAAAATGATTTTCGTATCTACTATAATGTTAGTTGCAGGCTACTTCGGTGAAGCTGTTTACACAACTGGTTCAGGTCCTGCAGTATGGGGTCTTATTTCAGGTATTGCTTATTTCTATATCGCATATGAAATTTGGCTTGGAGGAGCTTCAAAACTTGCAGCAGCAGCTGGTGGAGCAGTTCAATCTGCACACAAAGCATTATGTTGGTTTGTATTAGTAGGTTGGGCAATATATCCTATTGGGTATATGGCTGGAACTGAAGGATGGTATAGTGGCATTTTCGGCGGCCTTCCTATGGATGTCGTATATAATGTTGGCGATGCTATCAACAAAATTGGATTTGGTTTAGTAGTTTATAACTTAGCTGTCCAGTCAAAA IIDLIMEKILSLMTVAPAMATDDYVGFTFFVGCMAMMAASAFFFLSMNSFDSKWKTSILVSGLITFIAAVHYWYMRDYWATNATSPTFFRYVDWVLTVPLMCVEFYLILKAAGATKTLMWKMIFVSTIMLVAGYFGEAVYTTGSGPAVWGLISGIAYFYIAYEIWLGGASKLAAAAGGAVQSAHKALCWFVLVGWAIYPIGYMAGTEGWYSGIFGGLPMDVVYNVGDAINKIGFGLVVYNLAVQSK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATTGATTTAATCATGGAAAAAATTCTTAGCTTAATGACTGTAGCGCCAGCGATGGCCACAGACGACTACGTTGGATTTACTTTCTTCGTAGGATGTATGGCGATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTCGATAGTAAATGGAAAACCTCCATTCTAGTATCTGGATTAATTACGTTCATTGCAGCAGTACACTACTGGTACATGAGAGACTACTGGGCA---------------------------------------------------ACTAATGCAACATCCCCAACTTTCTTTAGGTATGTTGACTGG------------------------GTCCTTACTGTCCCTCTAATGTGTGTTGAATTCTATTTAATTCTTAAAGCA---------GCA------GGTGCAACTAAA---ACTTTA------------------------------------ATGTGGAAA---ATGATTTTCGTATCTACTATAATGTTAGTTGCAGGCTACTTCGGTGAA---------GCT------------------GTT------TACACA------------------------------------------------------ACT---------GGT---------------------------TCAGGTCCT------------------GCAGTATGG---GGTCTTATTTCAGGTATTGCTTATTTCTATATCGCATATGAAATT---------------TGG------CTT---GGAGGAGCTTCAAAACTTGCAGCAGCA------GCT---GGTGGAGCA---GTT---CAA---TCT---GCA---CAC---AAA---GCATTA---TGTTGGTTTGTATTAGTA---------------------------------------------------------------GGTTGG---------GCAATATATCCTATTGGGTATATGGCTGGAACTGAAGGA---TGGTAT---------AGT---GGCATTTTCGGCGGCCTTCCT---------------------ATGGATGTCGTATATAATGTTGGCGATGCTATCAACAAAATTGGATTTGGTTTAGTAGTTTATAACTTAGCTGTCCAGTCAAAA--------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------IIDLIMEKILSLMTVAPAMATDDYVGFTFFVGCMAMMAASAFFFLSMNSFDSKWKTSILVSGLITFIAAVHYWYMRDYWA-----------------TNATSPTFFRYVDW--------VLTVPLMCVEFYLILKA---A--GATK-TL------------MWK-MIFVSTIMLVAGYFGE---A------V--YT------------------T---G---------SGP------AVW-GLISGIAYFYIAYEI-----W--L-GGASKLAAA--A-GGA-V-Q-S-A-H-K-AL-CWFVLV---------------------GW---AIYPIGYMAGTEG-WY---S-GIFGGLP-------MDVVYNVGDAINKIGFGLVVYNLAVQSK--------------------------------------- [II-CFB-MS024]_EU683473 [II-CFB-MS024] A03_02_env_samples_EU683473 gi|187711419|gb|EU683473| Uncultured bacterium clone A03 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A03 putative proteorhodopsin gene, partial cds EU683473 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_surface_water_[2m] China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTCGATAGCAAATGGAAAACCTCCATTTTAGTATCTGGTTTAATTACGTTCATTGCAGCAGTTCACTACTGGTACATGAGAGACTATTGGGCAACTAATGCAACATCCCCAACTTTCTTTAGGTATGTTGACTGGGTTCTTACTGTCCCTCTAATGTGTGTTGAATTCTATTTAATACTTAAAGCAGCAGGTGCAACTAAAACATTAATGTGGAAAATGATATTCGTATCTACTATCATGTTAGTTACTGGATATATTGGTGAA AMMAASAFFFLSMNSFDSKWKTSILVSGLITFIAAVHYWYMRDYWATNATSPTFFRYVDWVLTVPLMCVEFYLILKAAGATKTLMWKMIFVSTIMLVTGYIGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTCGATAGCAAATGGAAAACCTCCATTTTAGTATCTGGTTTAATTACGTTCATTGCAGCAGTTCACTACTGGTACATGAGAGACTATTGGGCA---------------------------------------------------ACTAATGCAACATCCCCAACTTTCTTTAGGTATGTTGACTGG------------------------GTTCTTACTGTCCCTCTAATGTGTGTTGAATTCTATTTAATACTTAAAGCA---------GCA------GGTGCAACTAAA---ACATTA------------------------------------ATGTGGAAA---ATGATATTCGTATCTACTATCATGTTAGTTACTGGATATATTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDSKWKTSILVSGLITFIAAVHYWYMRDYWA-----------------TNATSPTFFRYVDW--------VLTVPLMCVEFYLILKA---A--GATK-TL------------MWK-MIFVSTIMLVTGYIGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_EU683525 [II-CFB-MS024] A120010_env_samples_EU683525 gi|187711523|gb|EU683525| Uncultured bacterium clone A120010 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A120010 putative proteorhodopsin gene, partial cds EU683525 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_200m_depth China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCCTTTGATAGTAAATGGAAAACTTCCATTTTAGTATCTGGTTTAATTACGTTCATTGCAGCAGTACACTACTGGTATATGAGAGACTATTGGGCAACTAATGCAACATCCCCAACTTTCTTTAGGTATGTTGACTGGGTTCTTACTGTCCCTCTAATGTGTGTAGAATTTTATTTAATTCTAAAAGCAGCAGGTGCAACTAAAACACTAATGTGGAAAATGATATTCGTATCTACTATCATGTTAGTTACTGGTTACTTTGGTGAA AMMAASAFFFLSMNSFDSKWKTSILVSGLITFIAAVHYWYMRDYWATNATSPTFFRYVDWVLTVPLMCVEFYLILKAAGATKTLMWKMIFVSTIMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCCTTTGATAGTAAATGGAAAACTTCCATTTTAGTATCTGGTTTAATTACGTTCATTGCAGCAGTACACTACTGGTATATGAGAGACTATTGGGCA---------------------------------------------------ACTAATGCAACATCCCCAACTTTCTTTAGGTATGTTGACTGG------------------------GTTCTTACTGTCCCTCTAATGTGTGTAGAATTTTATTTAATTCTAAAAGCA---------GCA------GGTGCAACTAAA---ACACTA------------------------------------ATGTGGAAA---ATGATATTCGTATCTACTATCATGTTAGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDSKWKTSILVSGLITFIAAVHYWYMRDYWA-----------------TNATSPTFFRYVDW--------VLTVPLMCVEFYLILKA---A--GATK-TL------------MWK-MIFVSTIMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_EU683522 [II-CFB-MS024] A120027_env_samples_EU683522 gi|187711517|gb|EU683522| Uncultured bacterium clone A120027 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A120027 putative proteorhodopsin gene, partial cds EU683522 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_200m_depth China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCGTTTTTCTTCCTGTCAATGAACTCTCACGATAGCAAGTGGAAAACATCAATTCTTGTTTCTGGATTGATAACTTTTATAGCAGCTGTACATTATTGGTACATGCGTGAGTATTGGATTTCAAACCAAACATCACCTACATTCTTCCGATATGTTGACTGGATTCTGACAGTTCCTCTTATGTGTGTAGAATTTTATTTAATTCTAAAAGCAGCTGGGGCGACTACAAAATTAATGTGGAGAATGATTATGTTATCAGTTGTAATGTTAGTTACTGGATACATTGGTGAA AMMAASAFFFLSMNSHDSKWKTSILVSGLITFIAAVHYWYMREYWISNQTSPTFFRYVDWILTVPLMCVEFYLILKAAGATTKLMWRMIMLSVVMLVTGYIGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCGTTTTTCTTCCTGTCAATGAACTCTCACGATAGCAAGTGGAAAACATCAATTCTTGTTTCTGGATTGATAACTTTTATAGCAGCTGTACATTATTGGTACATGCGTGAGTATTGGATT---------------------------------------------------TCAAACCAAACATCACCTACATTCTTCCGATATGTTGACTGG------------------------ATTCTGACAGTTCCTCTTATGTGTGTAGAATTTTATTTAATTCTAAAAGCA---------GCT------GGGGCGACTACA---AAATTA------------------------------------ATGTGGAGA---ATGATTATGTTATCAGTTGTAATGTTAGTTACTGGATACATTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSHDSKWKTSILVSGLITFIAAVHYWYMREYWI-----------------SNQTSPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GATT-KL------------MWR-MIMLSVVMLVTGYIGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_EU683523 [II-CFB-MS024] A12002_env_samples_EU683523 gi|187711519|gb|EU683523| Uncultured bacterium clone A12002 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A12002 putative proteorhodopsin gene, partial cds EU683523 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_200m_depth China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCGTTTTTCTTCCTGTCAATGAACTCTCACGATAGCAAGTGGAAAACATCAATTCTTGTTTCTGGATTGATAACTTTTATAGCAGCTGTACATTATTGGTACATGCGTGAGTATTGGATTTCAAACCAAACATCACCTACATTCTTCCGATATGTTGACTGGATTCTGACAGTTCCTCTTATGTGTGTAGAATTTTATTTAATTCTAAAAGCAGCTGGGGCGACTACAAAATTAATGTGGAGAATGATTATGTTATCAGTTGTAATGTTAGTTACTGGATACATTGGTGAA AMMAASAFFFLSMNSHDSKWKTSILVSGLITFIAAVHYWYMREYWISNQTSPTFFRYVDWILTVPLMCVEFYLILKAAGATTKLMWRMIMLSVVMLVTGYIGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCGTTTTTCTTCCTGTCAATGAACTCTCACGATAGCAAGTGGAAAACATCAATTCTTGTTTCTGGATTGATAACTTTTATAGCAGCTGTACATTATTGGTACATGCGTGAGTATTGGATT---------------------------------------------------TCAAACCAAACATCACCTACATTCTTCCGATATGTTGACTGG------------------------ATTCTGACAGTTCCTCTTATGTGTGTAGAATTTTATTTAATTCTAAAAGCA---------GCT------GGGGCGACTACA---AAATTA------------------------------------ATGTGGAGA---ATGATTATGTTATCAGTTGTAATGTTAGTTACTGGATACATTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSHDSKWKTSILVSGLITFIAAVHYWYMREYWI-----------------SNQTSPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GATT-KL------------MWR-MIMLSVVMLVTGYIGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_1105127034830 [II-CFB-MS024] JCVI_ORF_1105127034830_GS031_Coastal_upwelling_12m jcvi|1105127034830| 1105127034830 JCVI ORF 1105127034830 1105127034830 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 10-FEB-2004 Coastal_upwelling/12m_depth/S_n.a/GS031/Upwelling/Fernandina_Island/Galapagos_Islands Pacific Ocean marine -0.3011111 -91.651665 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATCATGGAAAAAATTTTAAGCTTAATGACTGTAGCGCCAGCAATGGCCACAGATGACTACGTAGGATTTACATTTTTCGTAGGATGTATGGCGATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGACAATAAATGGAAAGCATCAATTTTGGTGTCAGGTCTAATAACGTTCATTGCAGCTGTACACTATTGGTATATGCGTGACTATTGGGCAACTAATATGACTTCACCTACATTCTTTAGATATGTTGACTGGATACTTACAGTACCTCTAATGTGCGTTGAATTTTATTTAATTCTTAGAGCAGCAGGTGCTACAAAACAATTGATGTGGAAAATGATTTTCGCTTCTGTTGTTATGTTAGTTACTGGATATTTTGGAGAGGCTGTGTATACAAGTCAAGCCCAAGTTTGGGGTCTTATATCAGGTATCGCATATTTCTACATTGCTTATGAAATATGGTTAGGTGGTGCTTCTAAATTAGCTGCAGCAGCCGGCGGAGCTGTTCAATCTGCGCACAGAACATTATGTTGGTTTGTGTTAGTTGGTTGGGCAATTTATCCTATCGGATATATGGCTGGTACAGAAGGATGGTATAGTGGTATTTTTGGTGGTCTGCAAATGGACGTTATTTATAACGTTGGTGACGCCATCAATAAAATTGGGTTTGGACTAGTTGTATACCAATTAGCTGTAGACTCAAAA IMEKILSLMTVAPAMATDDYVGFTFFVGCMAMMAASAFFFLSMNSFDNKWKASILVSGLITFIAAVHYWYMRDYWATNMTSPTFFRYVDWILTVPLMCVEFYLILRAAGATKQLMWKMIFASVVMLVTGYFGEAVYTSQAQVWGLISGIAYFYIAYEIWLGGASKLAAAAGGAVQSAHRTLCWFVLVGWAIYPIGYMAGTEGWYSGIFGGLQMDVIYNVGDAINKIGFGLVVYQLAVDSK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCATGGAAAAAATTTTAAGCTTAATGACTGTAGCGCCAGCAATGGCCACAGATGACTACGTAGGATTTACATTTTTCGTAGGATGTATGGCGATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGACAATAAATGGAAAGCATCAATTTTGGTGTCAGGTCTAATAACGTTCATTGCAGCTGTACACTATTGGTATATGCGTGACTATTGGGCA---------------------------------------------------ACTAATATGACTTCACCTACATTCTTTAGATATGTTGACTGG------------------------ATACTTACAGTACCTCTAATGTGCGTTGAATTTTATTTAATTCTTAGAGCA---------GCA------GGTGCTACAAAA---CAATTG------------------------------------ATGTGGAAA---ATGATTTTCGCTTCTGTTGTTATGTTAGTTACTGGATATTTTGGAGAG---------GCT------------------GTG------TATACA------------------------------------------------------------------------------------------------AGTCAAGCC------------------CAAGTTTGG---GGTCTTATATCAGGTATCGCATATTTCTACATTGCTTATGAAATA---------------TGG------TTA---GGTGGTGCTTCTAAATTAGCTGCAGCA------GCC---GGCGGAGCT---GTT---CAA---TCT---GCG---CAC---AGA---ACATTA---TGTTGGTTTGTGTTAGTT---------------------------------------------------------------GGTTGG---------GCAATTTATCCTATCGGATATATGGCTGGTACAGAAGGA---TGGTAT---------AGT---GGTATTTTTGGTGGTCTGCAA---------------------ATGGACGTTATTTATAACGTTGGTGACGCCATCAATAAAATTGGGTTTGGACTAGTTGTATACCAATTAGCTGTAGACTCAAAA--------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------IMEKILSLMTVAPAMATDDYVGFTFFVGCMAMMAASAFFFLSMNSFDNKWKASILVSGLITFIAAVHYWYMRDYWA-----------------TNMTSPTFFRYVDW--------ILTVPLMCVEFYLILRA---A--GATK-QL------------MWK-MIFASVVMLVTGYFGE---A------V--YT--------------------------------SQA------QVW-GLISGIAYFYIAYEI-----W--L-GGASKLAAA--A-GGA-V-Q-S-A-H-R-TL-CWFVLV---------------------GW---AIYPIGYMAGTEG-WY---S-GIFGGLQ-------MDVIYNVGDAINKIGFGLVVYQLAVDSK--------------------------------------- [II-CFB-MS024]_FJ560806 [II-CFB-MS024] HEL81_env_samples_FJ560806 gi|223868759|gb|FJ560806| Uncultured microorganism clone HEL81 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL81 putative proteorhodopsin gene, partial cds FJ560806 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTGCCATTAATGTGTGTTGAATTCTATCTGATCCTTAGAGCAGCTGGAGCAACAAAACAATTGATGTGGAAAATGATTTTCGCTTCTGTTGTGATGTTGGTTACTGGTTACTTTGGAGAAGCAATATACACTACAGGTTCAGGTCCTGCAGTTTGGGGACTTGTTTCAGGTCTTGCATACTTCTGGATTGTTTACGAAATCTGGTTAGGTAGCGCTTCTAAACTAGCTGCTTCAGCAGGTGGTGCGGTTCAATCTGCACACAAAACACTTTGCTGG TVPLMCVEFYLILRAAGATKQLMWKMIFASVVMLVTGYFGEAIYTTGSGPAVWGLVSGLAYFWIVYEIWLGSASKLAASAGGAVQSAHKTLCW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTGCCATTAATGTGTGTTGAATTCTATCTGATCCTTAGAGCA---------GCT------GGAGCAACAAAA---CAATTG------------------------------------ATGTGGAAA---ATGATTTTCGCTTCTGTTGTGATGTTGGTTACTGGTTACTTTGGAGAA---------GCA------------------ATA------TACACT------------------------------------------------------ACA---------GGT---------------------------TCAGGTCCT------------------GCAGTTTGG---GGACTTGTTTCAGGTCTTGCATACTTCTGGATTGTTTACGAAATC---------------TGG------TTA---GGTAGCGCTTCTAAACTAGCTGCTTCA------GCA---GGTGGTGCG---GTT---CAA---TCT---GCA---CAC---AAA---ACACTT---TGCTGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLMCVEFYLILRA---A--GATK-QL------------MWK-MIFASVVMLVTGYFGE---A------I--YT------------------T---G---------SGP------AVW-GLVSGLAYFWIVYEI-----W--L-GSASKLAAS--A-GGA-V-Q-S-A-H-K-TL-CW------------------------------------------------------------------------------------------------------------------------------------ [II-CFB-MS024]_FJ560811 [II-CFB-MS024] HEL89_env_samples_FJ560811 gi|223868769|gb|FJ560811| Uncultured microorganism clone HEL89 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL89 putative proteorhodopsin gene, partial cds FJ560811 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTGCCATTAATGTGTGTTGAATTCTATCTGATCCTTAGAGCAGCTGGAGCAACAAAACAATTGATGTGGAAAATGATTTTCGCTTCTGTTGTGATGTTGGTTACTGGTTACTTTGGAGAAGCAATATACACTACAGGTTCAGGTCCTGCAGTTTGGGGACTTGTTTCAGGTCTTGCATACTTCTGGATTGTTTACGAAATCTGGTTAGGTAGCGCTTCTAAACTAGCTGCTTCAGCAGGTGGTGCGGTTCAATCTGCACACAAAACACTTTGCTGG TVPLMCVEFYLILRAAGATKQLMWKMIFASVVMLVTGYFGEAIYTTGSGPAVWGLVSGLAYFWIVYEIWLGSASKLAASAGGAVQSAHKTLCW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTGCCATTAATGTGTGTTGAATTCTATCTGATCCTTAGAGCA---------GCT------GGAGCAACAAAA---CAATTG------------------------------------ATGTGGAAA---ATGATTTTCGCTTCTGTTGTGATGTTGGTTACTGGTTACTTTGGAGAA---------GCA------------------ATA------TACACT------------------------------------------------------ACA---------GGT---------------------------TCAGGTCCT------------------GCAGTTTGG---GGACTTGTTTCAGGTCTTGCATACTTCTGGATTGTTTACGAAATC---------------TGG------TTA---GGTAGCGCTTCTAAACTAGCTGCTTCA------GCA---GGTGGTGCG---GTT---CAA---TCT---GCA---CAC---AAA---ACACTT---TGCTGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLMCVEFYLILRA---A--GATK-QL------------MWK-MIFASVVMLVTGYFGE---A------I--YT------------------T---G---------SGP------AVW-GLVSGLAYFWIVYEI-----W--L-GSASKLAAS--A-GGA-V-Q-S-A-H-K-TL-CW------------------------------------------------------------------------------------------------------------------------------------ [II-CFB-MS024]_FJ560862 [II-CFB-MS024] HEL152_env_samples_FJ560862 gi|223868871|gb|FJ560862| Uncultured microorganism clone HEL152 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL152 putative proteorhodopsin gene, partial cds FJ560862 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTGCCATTAATGTGTGTTGAATTCTATCTGATCCTTAGAGCAGCTGGAGCAACAAAACAATTGATGTGGAAAATGATTTTCGCTTCTGTTGTGATGTTGGTTACTGGTTACTTTGGAGAAGCAATATACACTACAGGTTCAGGTCCTGCAGTTTGGGGACTTGTTTCAGGTCTTGCATACTTCTGGATTGTTTACGAAATCTGGTTAGGTAGCGCTTCTAAACTAGCTGCTTCAGCAGGTGGTGCGGTTCAATCATGCGACACAAAACACTTTGCTGGT TVPLMCVEFYLILRAAGATKQLMWKMIFASVVMLVTGYFGEAIYTTGSGPAVWGLVSGLAYFWIVYEIWLGSASKLAASAGGAVQSCDTKHFAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTGCCATTAATGTGTGTTGAATTCTATCTGATCCTTAGAGCA---------GCT------GGAGCAACAAAA---CAATTG------------------------------------ATGTGGAAA---ATGATTTTCGCTTCTGTTGTGATGTTGGTTACTGGTTACTTTGGAGAA---------GCA------------------ATA------TACACT------------------------------------------------------ACA---------GGT---------------------------TCAGGTCCT------------------GCAGTTTGG---GGACTTGTTTCAGGTCTTGCATACTTCTGGATTGTTTACGAAATC---------------TGG------TTA---GGTAGCGCTTCTAAACTAGCTGCTTCA------GCA---GGTGGTGCG---GTT---CAA---TCA---TGC---GACACAAAA---CACTTT---GCTGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLMCVEFYLILRA---A--GATK-QL------------MWK-MIFASVVMLVTGYFGE---A------I--YT------------------T---G---------SGP------AVW-GLVSGLAYFWIVYEI-----W--L-GSASKLAAS--A-GGA-V-Q-S-C-DTK-HF-AG------------------------------------------------------------------------------------------------------------------------------------ [II-CFB-MS024]_FJ560775 [II-CFB-MS024] HEL36_env_samples_FJ560775 gi|223868697|gb|FJ560775| Uncultured microorganism clone HEL36 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL36 putative proteorhodopsin gene, partial cds FJ560775 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTGCCATTAATGTGTGTTGAATTCTATCTGATCCTTAGAGCAGCTGGAGCAACAAAACAATTGATGTGGAAAATGATTTTCGCTTCTATTGTGATGTTAGTTACTGGTTACTTTGGAGAAGCAGTATACACAACAGGTTCAGGCCCTGCAGTTTGGGGTCTTGTTTCAGGTCTTGCATACTTCTGGATTGTTTACGAAATCAGGTTAGGTAGCGCTTCTAAACTAGCTGCTTCAGCAGGTGGTGCTGTTCAGTTTAAAAAGGGGAAAACACTTTGCTGG TVPLMCVEFYLILRAAGATKQLMWKMIFASIVMLVTGYFGEAVYTTGSGPAVWGLVSGLAYFWIVYEIRLGSASKLAASAGGAVQFKKGKTLCW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTGCCATTAATGTGTGTTGAATTCTATCTGATCCTTAGAGCA---------GCT------GGAGCAACAAAA---CAATTG------------------------------------ATGTGGAAA---ATGATTTTCGCTTCTATTGTGATGTTAGTTACTGGTTACTTTGGAGAA---------GCA------------------GTA------TACACA------------------------------------------------------ACA---------GGT---------------------------TCAGGCCCT------------------GCAGTTTGG---GGTCTTGTTTCAGGTCTTGCATACTTCTGGATTGTTTACGAAATC---------------AGG------TTA---GGTAGCGCTTCTAAACTAGCTGCTTCA------GCA---GGTGGTGCT---GTT---CAGTTTAAA---AAG---GGG---AAA---ACACTT---TGCTGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLMCVEFYLILRA---A--GATK-QL------------MWK-MIFASIVMLVTGYFGE---A------V--YT------------------T---G---------SGP------AVW-GLVSGLAYFWIVYEI-----R--L-GSASKLAAS--A-GGA-V-QFK-K-G-K-TL-CW------------------------------------------------------------------------------------------------------------------------------------ [II-CFB-MS024]_FJ560783 [II-CFB-MS024] HEL47_env_samples_FJ560783 gi|223868713|gb|FJ560783| Uncultured microorganism clone HEL47 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL47 putative proteorhodopsin gene, partial cds FJ560783 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTGCCATTAATGTGTGTTGAATTCTATCTGATCCTTAGAGCAGCTGGAGCAACAAAACAATTGATGTGGAAAATGATTTTCGCTTCTATTGTGATGTTAGTTACTGGTTACTTTGGAGAAGCAGTATACACAACAGGCTCAGGCCCTGCAGTTTGGGGTCTTGTTTCAGGTCTTGCATACTTCTGGATTGTTTACGAAATCTGGTTAGGTAGCGCTTCTAAACTAGCTGCTTCAGCAGGTGGTGCTGTTCCCCTC TVPLMCVEFYLILRAAGATKQLMWKMIFASIVMLVTGYFGEAVYTTGSGPAVWGLVSGLAYFWIVYEIWLGSASKLAASAGGAVPL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTGCCATTAATGTGTGTTGAATTCTATCTGATCCTTAGAGCA---------GCT------GGAGCAACAAAA---CAATTG------------------------------------ATGTGGAAA---ATGATTTTCGCTTCTATTGTGATGTTAGTTACTGGTTACTTTGGAGAA---------GCA------------------GTA------TACACA------------------------------------------------------ACA---------GGC---------------------------TCAGGCCCT------------------GCAGTTTGG---GGTCTTGTTTCAGGTCTTGCATACTTCTGGATTGTTTACGAAATC---------------TGG------TTA---GGTAGCGCTTCTAAACTAGCTGCTTCA------GCA---GGTGGTGCT---GTT---------------------------------------------------------------------------------------------------------------------------------------------------CCCCTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLMCVEFYLILRA---A--GATK-QL------------MWK-MIFASIVMLVTGYFGE---A------V--YT------------------T---G---------SGP------AVW-GLVSGLAYFWIVYEI-----W--L-GSASKLAAS--A-GGA-V-------------------------------------------------PL------------------------------------------------------------------------------------------------- [II-CFB-MS024]_FJ560774 [II-CFB-MS024] HEL33_env_samples_FJ560774 gi|223868695|gb|FJ560774| Uncultured microorganism clone HEL33 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL33 putative proteorhodopsin gene, partial cds FJ560774 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTGCCATTAATGTGTGTTGAATTCTATCTGATCCTTAGAGCAGCTGGAGCAACAAAACAATTGATGTGGAAAATGATTTTCGCTTCTATTGTGATGTTAGTTACTGGTTACTTTGGAGAAGCAGTATACACAACAGGCTCAGGCCCTGCAGTTTGGGGTCTTGTTTCAGGTCTTGCATACTTCTGGATTGTTTACGAAATCTGGTTAGGTAGCGCTTCTAAACTAGCTGCTTCAGCAGGTGGTGCTGTTCAGTTT TVPLMCVEFYLILRAAGATKQLMWKMIFASIVMLVTGYFGEAVYTTGSGPAVWGLVSGLAYFWIVYEIWLGSASKLAASAGGAVQF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTGCCATTAATGTGTGTTGAATTCTATCTGATCCTTAGAGCA---------GCT------GGAGCAACAAAA---CAATTG------------------------------------ATGTGGAAA---ATGATTTTCGCTTCTATTGTGATGTTAGTTACTGGTTACTTTGGAGAA---------GCA------------------GTA------TACACA------------------------------------------------------ACA---------GGC---------------------------TCAGGCCCT------------------GCAGTTTGG---GGTCTTGTTTCAGGTCTTGCATACTTCTGGATTGTTTACGAAATC---------------TGG------TTA---GGTAGCGCTTCTAAACTAGCTGCTTCA------GCA---GGTGGTGCT---GTT---CAG---TTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLMCVEFYLILRA---A--GATK-QL------------MWK-MIFASIVMLVTGYFGE---A------V--YT------------------T---G---------SGP------AVW-GLVSGLAYFWIVYEI-----W--L-GSASKLAAS--A-GGA-V-Q-F------------------------------------------------------------------------------------------------------------------------------------------------ [II-CFB-MS024]_FJ560760 [II-CFB-MS024] HEL14_env_samples_FJ560760 gi|223868667|gb|FJ560760| Uncultured microorganism clone HEL14 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL14 putative proteorhodopsin gene, partial cds FJ560760 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTGCCATTAATGTGTGTTGAATTCTATCTGATCCTTAGAGCAGCTGGAGCAACAAAACAATTGATGTGGAAAATGATTTTCGCTTCTATTGTGATGTTAGTTACTGGTTACTTTGGAGAAGCAGTATACACAACAGGCTCAGGCCCTGCAGTTTGGGGTCTTGTTTCAGGTCTTGCATACTTCTGGATTGTTTACGAAATCTGGTTAGGTAGCGCTTCTAAACTAGCTGCTTCAGCAGGTGGTGCTGTTCAGTCTAACACGATAAAACACTTTGCTGGT TVPLMCVEFYLILRAAGATKQLMWKMIFASIVMLVTGYFGEAVYTTGSGPAVWGLVSGLAYFWIVYEIWLGSASKLAASAGGAVQSNTIKHFAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTGCCATTAATGTGTGTTGAATTCTATCTGATCCTTAGAGCA---------GCT------GGAGCAACAAAA---CAATTG------------------------------------ATGTGGAAA---ATGATTTTCGCTTCTATTGTGATGTTAGTTACTGGTTACTTTGGAGAA---------GCA------------------GTA------TACACA------------------------------------------------------ACA---------GGC---------------------------TCAGGCCCT------------------GCAGTTTGG---GGTCTTGTTTCAGGTCTTGCATACTTCTGGATTGTTTACGAAATC---------------TGG------TTA---GGTAGCGCTTCTAAACTAGCTGCTTCA------GCA---GGTGGTGCT---GTT---CAG---TCT---------------AAC---ACGATA---AAACACTTTGCTGGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLMCVEFYLILRA---A--GATK-QL------------MWK-MIFASIVMLVTGYFGE---A------V--YT------------------T---G---------SGP------AVW-GLVSGLAYFWIVYEI-----W--L-GSASKLAAS--A-GGA-V-Q-S-----N-TI-KHFAG--------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_FJ560785 [II-CFB-MS024] HEL49_env_samples_FJ560785 gi|223868717|gb|FJ560785| Uncultured microorganism clone HEL49 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL49 putative proteorhodopsin gene, partial cds FJ560785 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTGCCATTAATGTGTGTTGAATTCTATCTGATCCTTAGAGCAGCTGGAGCAACAAAACAATTGATGTGGAAAATGATTTTCGCTTCTATTGTGATGTTAGTTACTGGTTACTTTGGAGAAGCAGTATACACAACAGGCTCAGGCCCTGCAGTTTGGGGTCTTGTTTCAGGTCTTGCATACTTCTGGATTGTTTACGAAATCTGGTTAGGTAGCGCTTCTAAACTAGCTGCTTCAGCAGGTGGTGCTGTTCAGTCTAAAACGATAAAACACTTTGCTGGT TVPLMCVEFYLILRAAGATKQLMWKMIFASIVMLVTGYFGEAVYTTGSGPAVWGLVSGLAYFWIVYEIWLGSASKLAASAGGAVQSKTIKHFAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTGCCATTAATGTGTGTTGAATTCTATCTGATCCTTAGAGCA---------GCT------GGAGCAACAAAA---CAATTG------------------------------------ATGTGGAAA---ATGATTTTCGCTTCTATTGTGATGTTAGTTACTGGTTACTTTGGAGAA---------GCA------------------GTA------TACACA------------------------------------------------------ACA---------GGC---------------------------TCAGGCCCT------------------GCAGTTTGG---GGTCTTGTTTCAGGTCTTGCATACTTCTGGATTGTTTACGAAATC---------------TGG------TTA---GGTAGCGCTTCTAAACTAGCTGCTTCA------GCA---GGTGGTGCT---GTT---CAG---TCT---------------AAA---ACGATA---AAACACTTTGCTGGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLMCVEFYLILRA---A--GATK-QL------------MWK-MIFASIVMLVTGYFGE---A------V--YT------------------T---G---------SGP------AVW-GLVSGLAYFWIVYEI-----W--L-GSASKLAAS--A-GGA-V-Q-S-----K-TI-KHFAG--------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_FJ560770 [II-CFB-MS024] HEL29_env_samples_FJ560770 gi|223868687|gb|FJ560770| Uncultured microorganism clone HEL29 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL29 putative proteorhodopsin gene, partial cds FJ560770 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACCGTACCATTAATGTGTGTTGAGTTTTATTTAATCTTAAAAGCAGCAGGTGCTACTAAACAATTGATGTGGAAAATGATTTTCGCTTCTTTAGTAATGTTAGTAACTGGTTATTTTGGAGAAGCTGTTTACACTACAGGATCAGGTCCTGCAGTTTGGGGGCTTATTTCTGGACTTGCTTATTTCTGGATAGTTTATGAAATCTGGATGGGTGGTGCTTGTAAATTAGCTGCTTCTGCAGGTGGTGCAGTTCAATTTCATTGGACAAAACTCTTTGCTGGT TVPLMCVEFYLILKAAGATKQLMWKMIFASLVMLVTGYFGEAVYTTGSGPAVWGLISGLAYFWIVYEIWMGGACKLAASAGGAVQFHWTKLFAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCGTACCATTAATGTGTGTTGAGTTTTATTTAATCTTAAAAGCA---------GCA------GGTGCTACTAAA---CAATTG------------------------------------ATGTGGAAA---ATGATTTTCGCTTCTTTAGTAATGTTAGTAACTGGTTATTTTGGAGAA---------GCT------------------GTT------TACACT------------------------------------------------------ACA---------GGA---------------------------TCAGGTCCT------------------GCAGTTTGG---GGGCTTATTTCTGGACTTGCTTATTTCTGGATAGTTTATGAAATC---------------TGG------ATG---GGTGGTGCTTGTAAATTAGCTGCTTCT------GCA---GGTGGTGCA---GTT---CAA------------------------------TTT---CATTGGACAAAACTCTTT------------------------------------------------------------GCTGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLMCVEFYLILKA---A--GATK-QL------------MWK-MIFASLVMLVTGYFGE---A------V--YT------------------T---G---------SGP------AVW-GLISGLAYFWIVYEI-----W--M-GGACKLAAS--A-GGA-V-Q----------F-HWTKLF--------------------AG---------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_JX863298 [II-CFB-MS024] MALINA_OTU37_049_M_env_samples_JX863298 gi|425477546|gb|JX863298| Uncultured bacterium clone MALINA OTU37 049 M putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU37 049 M putative proteorhodopsin mRNA, partial cds JX863298 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 07Aug2009 5m_depth Arctic Ocean marine 70.91 -128.92 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGGTGTTAACTGTTCCGTTAATGTGTGTTGAATTTTATATAATTCTAAAAGCAGCTGGAGCTACTAAACAATTAATGTGGAAATTGATTTTCGCTTCTATTGTTATGTTAGTAACAGGTTACTTTGGAGAAGCTGTATACACAACGGGATCAGGTCCTGCAGTTTGGGGTCTTGTTTCTGCTCTTGCTTATTTCTGGATTGTATATGAAATCTGGATGGGTAGCACTTCCAAACTAGCTGCAGCTGCCGGTGGTGCAGTACAAGCTGCTCATAAAACACTCTGCTGGTTTGTTCTTGTA WVLTVPLMCVEFYIILKAAGATKQLMWKLIFASIVMLVTGYFGEAVYTTGSGPAVWGLVSALAYFWIVYEIWMGSTSKLAAAAGGAVQAAHKTLCWFVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------GTGTTAACTGTTCCGTTAATGTGTGTTGAATTTTATATAATTCTAAAAGCA---------GCT------GGAGCTACTAAA---CAATTA------------------------------------ATGTGGAAA---TTGATTTTCGCTTCTATTGTTATGTTAGTAACAGGTTACTTTGGAGAA---------GCT------------------GTA------TACACA------------------------------------------------------ACG---------GGA---------------------------TCAGGTCCT------------------GCAGTTTGG---GGTCTTGTTTCTGCTCTTGCTTATTTCTGGATTGTATATGAAATC---------------TGG------ATG---GGTAGCACTTCCAAACTAGCTGCAGCT------GCC---GGTGGTGCA---GTA---CAA---GCT---GCT---CAT---AAA---ACACTC---TGCTGGTTTGTTCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------VLTVPLMCVEFYIILKA---A--GATK-QL------------MWK-LIFASIVMLVTGYFGE---A------V--YT------------------T---G---------SGP------AVW-GLVSALAYFWIVYEI-----W--M-GSTSKLAAA--A-GGA-V-Q-A-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_JX863299 [II-CFB-MS024] MALINA_OTU37_080_M_env_samples_JX863299 gi|425477548|gb|JX863299| Uncultured bacterium clone MALINA OTU37 080 M putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU37 080 M putative proteorhodopsin mRNA, partial cds JX863299 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 07Aug2009 5m_depth Arctic Ocean marine 70.91 -128.92 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGGTGCTAACTGTTCCGTTAATGTGTGTTGAATTTTATTTAATTCTAAAAGCAGCTGGAGCTACTAAACAATTAATGTGGAAATTGATTTTCGCTTCTATTGTTATGTTAGTAACAGGTTACTTTGGAGAAGCTGTATACACAACGGGATCAGGTCCTGCAGTTTGGGGTCTTGTTTCTGGTCTTGCTTATTTCTGGATTGTATATGAAATCTGGATGGGTAGCACTTCCAAACTAGCTGCAGCTGCCGGTGGTGCAGTACAAGCTGCTCATAAAACACTCTGCTGGTTTGTTCTTGTA WVLTVPLMCVEFYLILKAAGATKQLMWKLIFASIVMLVTGYFGEAVYTTGSGPAVWGLVSGLAYFWIVYEIWMGSTSKLAAAAGGAVQAAHKTLCWFVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------GTGCTAACTGTTCCGTTAATGTGTGTTGAATTTTATTTAATTCTAAAAGCA---------GCT------GGAGCTACTAAA---CAATTA------------------------------------ATGTGGAAA---TTGATTTTCGCTTCTATTGTTATGTTAGTAACAGGTTACTTTGGAGAA---------GCT------------------GTA------TACACA------------------------------------------------------ACG---------GGA---------------------------TCAGGTCCT------------------GCAGTTTGG---GGTCTTGTTTCTGGTCTTGCTTATTTCTGGATTGTATATGAAATC---------------TGG------ATG---GGTAGCACTTCCAAACTAGCTGCAGCT------GCC---GGTGGTGCA---GTA---CAA---GCT---GCT---CAT---AAA---ACACTC---TGCTGGTTTGTTCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------VLTVPLMCVEFYLILKA---A--GATK-QL------------MWK-LIFASIVMLVTGYFGE---A------V--YT------------------T---G---------SGP------AVW-GLVSGLAYFWIVYEI-----W--M-GSTSKLAAA--A-GGA-V-Q-A-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_1105152635538 [II-CFB-MS024] JCVI_ORF_1105152635538_GS008_Coastal_1m jcvi|1105152635538| 1105152635538 JCVI ORF 1105152635538 1105152635538 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 16-nov-03 Coastal/1m_depth/S_26.5_psu/GS008/Newport_Harbor/RI/North_American_East_Coast Atlantic Ocean marine 41.485832 -71.35111 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATAATTGATTTAATCATGGAAAAAATTCTAAGCTTAATGACTGTAGCGCCAGCGATGGCCACAGATGACTACGTAGGATTCACATTCTTCGTAGGATGTATGGCGATGATGGCAGCATCAGCGTTCTTCTTTCTCTCAATGAACTCCTTTGACAACAAATGGAAAACTTCCATCTTGGTGTCTGGTTTAATTACGTTCATTGCAGCAGTACACTACTGGTACATGCGTGACTACTGGGCAACAAATGCAACTTCTCCTACATTCTTTAGATATGTGGATTGGGTGCTTACAGTGCCTTTAATGTGTGTAGAGTTCTATTTAATTCTAAGAGCAGCCGGTGCTACAAAACAATTGATGTGGAAAATGATTTTCGCTTCTGTTGTGATGTTGGTAACAGGTTACTTCGGTGAAGCAGTTTACACAACTGGTACAGGTCCTGCAGTTTGGGGTCTTGTTTCTGGTCTTGCATACTTCTGGATTGTTTATGAAATCTGGATGGGTAGTGCTTCTAAACTTGCTGCTTCTGCAGGTGGTGCGGTACAGTCTGCTCACAAAACACTTTGCTGGTTCGTACTTGTAGGTTGGGCTATTTATCCTATTGGATACATGGCAGGAACTGAAGGATGGTACAGTGGAATATTTGGTGGTCTTCCTATGGATGTTATTTATAACGTTGGGGATGCGATCAATAAGATTGGATTTGGTTTAGTTGTATACAACCTAGCTGTCAATCACTCAAGCCGT IIDLIMEKILSLMTVAPAMATDDYVGFTFFVGCMAMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWATNATSPTFFRYVDWVLTVPLMCVEFYLILRAAGATKQLMWKMIFASVVMLVTGYFGEAVYTTGTGPAVWGLVSGLAYFWIVYEIWMGSASKLAASAGGAVQSAHKTLCWFVLVGWAIYPIGYMAGTEGWYSGIFGGLPMDVIYNVGDAINKIGFGLVVYNLAVNHSSR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATTGATTTAATCATGGAAAAAATTCTAAGCTTAATGACTGTAGCGCCAGCGATGGCCACAGATGACTACGTAGGATTCACATTCTTCGTAGGATGTATGGCGATGATGGCAGCATCAGCGTTCTTCTTTCTCTCAATGAACTCCTTTGACAACAAATGGAAAACTTCCATCTTGGTGTCTGGTTTAATTACGTTCATTGCAGCAGTACACTACTGGTACATGCGTGACTACTGGGCA---------------------------------------------------ACAAATGCAACTTCTCCTACATTCTTTAGATATGTGGATTGG------------------------GTGCTTACAGTGCCTTTAATGTGTGTAGAGTTCTATTTAATTCTAAGAGCA---------GCC------GGTGCTACAAAA---CAATTG------------------------------------ATGTGGAAA---ATGATTTTCGCTTCTGTTGTGATGTTGGTAACAGGTTACTTCGGTGAA---------GCA------------------GTT------TACACA------------------------------------------------------ACT---------GGT---------------------------ACAGGTCCT------------------GCAGTTTGG---GGTCTTGTTTCTGGTCTTGCATACTTCTGGATTGTTTATGAAATC---------------TGG------ATG---GGTAGTGCTTCTAAACTTGCTGCTTCT------GCA---GGTGGTGCG---GTA---CAG---TCT---GCT---CAC---AAA---ACACTT---TGCTGGTTCGTACTTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCTATTGGATACATGGCAGGAACTGAAGGA---TGGTAC---------AGT---GGAATATTTGGTGGTCTTCCT---------------------ATGGATGTTATTTATAACGTTGGGGATGCGATCAATAAGATTGGATTTGGTTTAGTTGTATACAACCTAGCTGTCAATCACTCAAGCCGT--------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------IIDLIMEKILSLMTVAPAMATDDYVGFTFFVGCMAMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWA-----------------TNATSPTFFRYVDW--------VLTVPLMCVEFYLILRA---A--GATK-QL------------MWK-MIFASVVMLVTGYFGE---A------V--YT------------------T---G---------TGP------AVW-GLVSGLAYFWIVYEI-----W--M-GSASKLAAS--A-GGA-V-Q-S-A-H-K-TL-CWFVLV---------------------GW---AIYPIGYMAGTEG-WY---S-GIFGGLP-------MDVIYNVGDAINKIGFGLVVYNLAVNHSSR------------------------------------- [II-CFB-MS024]_EF202343 [II-CFB-MS024] Flavobacteria_MS024_2A_ctg71_genome_EF202343 gi|124109473|gb|EF202343| Uncultured Flavobacteria bacterium clone MS0242A proteorhodopsin gene, partial cds Uncultured Flavobacteria bacterium clone MS0242A proteorhodopsin gene, partial cds EF202343 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/environmental samples] taxon:212695 genomic_DNA other 24May-2007 28-mars-05 Boothbay_Harbor/1m_depth Atlantic Ocean marine 43.8444 -69.6410 Matching phylogeny and metabolism in the uncultured marine bacteria, one cell at a time Stepanauskas,R. and Sieracki,M.E. Proc. Natl. Acad. Sci. U.S.A. 104 (21), 90529057 (2007) 17502618 whole genome amplification products of a single uncultured cell ATGGAAAAAATTCTAAGTTTAATGACTGTGGTTCCAGCAATGGCCACTGACGACTACGTTGGATTCACGTTCTTCGTAGGATGTATGGCGATGATGGCAGCATCAGCGTTCTTTTTTCTCTCAATGAGCTCTTTTGACAACAAATGGAGAACTTCTATTTTGGTGTCTGGTTTAATTACGTTCATTGCAGCAGTTCACTACTGGTACATGCGTGATTATTGGGCAACTAATATGACCTCTCCTACTTTCTTTAGATATGTAGACTGGGTATTGACTGTTCCATTAATGTGTGTAGAGTTCTATTTAATTTTGAAAGCTGCTGGTGCAACAAAACAATTGATGTGGAAAATGATTTTCGCTTCAATCGTTATGTTAGTTACTGGTTACTTTGGTGAAGCAGTTTACACAACAGGATCAGGTCCTGCTGTTTGGGGACTTATTTCAGGTCTTGCTTACTTCTGGATTGTTTATGAAATCTGGATGGGAAGTGCTTCTAAGCTAGCTGCCTCTGCAGGTGGAGCTGTTCAATCGGCTCATAAAACACTTTGTTGGTTCGTTCTTGTAGGATGGGCAATATATCCAATTGGATACATGGCTGGTACTGAAGGATGGTACAGTGGAATCTTTGGTGGTCTTCCAATGGATGTTATTTATAACGTTGGGGATGCGATCAACAAAATTGGATTTGGTTTAGTTGTATATAACTTAGCTGTTAATTCAAAA MEKILSLMTVVPAMATDDYVGFTFFVGCMAMMAASAFFFLSMSSFDNKWRTSILVSGLITFIAAVHYWYMRDYWATNMTSPTFFRYVDWVLTVPLMCVEFYLILKAAGATKQLMWKMIFASIVMLVTGYFGEAVYTTGSGPAVWGLISGLAYFWIVYEIWMGSASKLAASAGGAVQSAHKTLCWFVLVGWAIYPIGYMAGTEGWYSGIFGGLPMDVIYNVGDAINKIGFGLVVYNLAVNSK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGAAAAAATTCTAAGTTTAATGACTGTGGTTCCAGCAATGGCCACTGACGACTACGTTGGATTCACGTTCTTCGTAGGATGTATGGCGATGATGGCAGCATCAGCGTTCTTTTTTCTCTCAATGAGCTCTTTTGACAACAAATGGAGAACTTCTATTTTGGTGTCTGGTTTAATTACGTTCATTGCAGCAGTTCACTACTGGTACATGCGTGATTATTGGGCA---------------------------------------------------ACTAATATGACCTCTCCTACTTTCTTTAGATATGTAGACTGG------------------------GTATTGACTGTTCCATTAATGTGTGTAGAGTTCTATTTAATTTTGAAAGCT---------GCT------GGTGCAACAAAA---CAATTG------------------------------------ATGTGGAAA---ATGATTTTCGCTTCAATCGTTATGTTAGTTACTGGTTACTTTGGTGAA---------GCA------------------GTT------TACACA------------------------------------------------------ACA---------GGA---------------------------TCAGGTCCT------------------GCTGTTTGG---GGACTTATTTCAGGTCTTGCTTACTTCTGGATTGTTTATGAAATC---------------TGG------ATG---GGAAGTGCTTCTAAGCTAGCTGCCTCT------GCA---GGTGGAGCT---GTT---CAA---TCG---GCT---CAT---AAA---ACACTT---TGTTGGTTCGTTCTTGTA---------------------------------------------------------------GGATGG---------GCAATATATCCAATTGGATACATGGCTGGTACTGAAGGA---TGGTAC---------AGT---GGAATCTTTGGTGGTCTTCCA---------------------ATGGATGTTATTTATAACGTTGGGGATGCGATCAACAAAATTGGATTTGGTTTAGTTGTATATAACTTAGCTGTTAATTCAAAA--------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------MEKILSLMTVVPAMATDDYVGFTFFVGCMAMMAASAFFFLSMSSFDNKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------TNMTSPTFFRYVDW--------VLTVPLMCVEFYLILKA---A--GATK-QL------------MWK-MIFASIVMLVTGYFGE---A------V--YT------------------T---G---------SGP------AVW-GLISGLAYFWIVYEI-----W--M-GSASKLAAS--A-GGA-V-Q-S-A-H-K-TL-CWFVLV---------------------GW---AIYPIGYMAGTEG-WY---S-GIFGGLP-------MDVIYNVGDAINKIGFGLVVYNLAVNSK--------------------------------------- [II-CFB-MS024]_1105145485660 [II-CFB-MS024] JCVI_ORF_1105145485660_GS008_Coastal_1m jcvi|1105145485660| 1105145485660 JCVI ORF 1105145485660 1105145485660 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 16-nov-03 Coastal/1m_depth/S_26.5_psu/GS008/Newport_Harbor/RI/North_American_East_Coast Atlantic Ocean marine 41.485832 -71.35111 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATTGATTTAATTATGGAAAAAATTCTAAGTTTAATGACTGTGGTTCCAGCAATGGCCACTGACGACTACGTTGGATTCACGTTCTTCGTAGGATGTATGGCGATGATGGCAGCATCAGCGTTCTTTTTTCTCTCAATGAGCTCTTTTGACAACAAATGGAGAACTTCTATTTTGGTGTCTGGTTTAATTACGTTCATTGCAGCAGTTCACTACTGGTACATGCGTGATTATTGGGCAACTAATATGACCTCTCCTACTTTCTTTAGATATGTAGACTGGGTATTGACTGTTCCATTAATGTGTGTAGAGTTCTATTTAATTTTGAAAGCTGCTGGTGCAACAAAACAATTGATGTGGAAAATGATTTTCGCTTCAATCGTTATGTTAGTTACTGGTTACTTTGGTGAAGCAGTTTACACAACAGGATCAGGTCCTGCTGTTTGGGGACTTATTTCAGGTCTTGCTTACTTCTGGATTGTTTATGAAATCTGGATGGGAAGTGCTTCTAAGCTAGCTGCCTCTGCAGGTGGAGCTGTTCAATCGGCTCATAAAACACTTTGTTGGTTCGTTCTTGTAGGATGGGCAATATATCCAATTGGATACATGGCTGGTACTGAAGGATGGTACAGTGGAATCTTTGGTGGTCTTCCAATGGATGTTATTTATAACGTTGGGGATGCGATCAACAAAATTGGATTTGGTTTAGTTGTATATAACTTAGCTGTTAATTCAAAA IDLIMEKILSLMTVVPAMATDDYVGFTFFVGCMAMMAASAFFFLSMSSFDNKWRTSILVSGLITFIAAVHYWYMRDYWATNMTSPTFFRYVDWVLTVPLMCVEFYLILKAAGATKQLMWKMIFASIVMLVTGYFGEAVYTTGSGPAVWGLISGLAYFWIVYEIWMGSASKLAASAGGAVQSAHKTLCWFVLVGWAIYPIGYMAGTEGWYSGIFGGLPMDVIYNVGDAINKIGFGLVVYNLAVNSK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGATTTAATTATGGAAAAAATTCTAAGTTTAATGACTGTGGTTCCAGCAATGGCCACTGACGACTACGTTGGATTCACGTTCTTCGTAGGATGTATGGCGATGATGGCAGCATCAGCGTTCTTTTTTCTCTCAATGAGCTCTTTTGACAACAAATGGAGAACTTCTATTTTGGTGTCTGGTTTAATTACGTTCATTGCAGCAGTTCACTACTGGTACATGCGTGATTATTGGGCA---------------------------------------------------ACTAATATGACCTCTCCTACTTTCTTTAGATATGTAGACTGG------------------------GTATTGACTGTTCCATTAATGTGTGTAGAGTTCTATTTAATTTTGAAAGCT---------GCT------GGTGCAACAAAA---CAATTG------------------------------------ATGTGGAAA---ATGATTTTCGCTTCAATCGTTATGTTAGTTACTGGTTACTTTGGTGAA---------GCA------------------GTT------TACACA------------------------------------------------------ACA---------GGA---------------------------TCAGGTCCT------------------GCTGTTTGG---GGACTTATTTCAGGTCTTGCTTACTTCTGGATTGTTTATGAAATC---------------TGG------ATG---GGAAGTGCTTCTAAGCTAGCTGCCTCT------GCA---GGTGGAGCT---GTT---CAA---TCG---GCT---CAT---AAA---ACACTT---TGTTGGTTCGTTCTTGTA---------------------------------------------------------------GGATGG---------GCAATATATCCAATTGGATACATGGCTGGTACTGAAGGA---TGGTAC---------AGT---GGAATCTTTGGTGGTCTTCCA---------------------ATGGATGTTATTTATAACGTTGGGGATGCGATCAACAAAATTGGATTTGGTTTAGTTGTATATAACTTAGCTGTTAATTCAAAA--------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------IDLIMEKILSLMTVVPAMATDDYVGFTFFVGCMAMMAASAFFFLSMSSFDNKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------TNMTSPTFFRYVDW--------VLTVPLMCVEFYLILKA---A--GATK-QL------------MWK-MIFASIVMLVTGYFGE---A------V--YT------------------T---G---------SGP------AVW-GLISGLAYFWIVYEI-----W--M-GSASKLAAS--A-GGA-V-Q-S-A-H-K-TL-CWFVLV---------------------GW---AIYPIGYMAGTEG-WY---S-GIFGGLP-------MDVIYNVGDAINKIGFGLVVYNLAVNSK--------------------------------------- [II-CFB-MS024]_1105102499548 [II-CFB-MS024] JCVI_ORF_1105102499548_GS006_Estuary_1m jcvi|1105102499548| 1105102499548 JCVI ORF 1105102499548 1105102499548 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 23-AUG-2003 Estuary/1m_depth/S_n.a/GS006/Bay_of_Fundy/Nova_Scotia/North_American_East_Coast Atlantic Ocean marine 45.111668 -64.94666 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATTGATTTAATTATGGAAAAAATTCTAAGTTTAATGACTGTGGTTCCAGCAATGGCCACTGACGACTACGTTGGATTCACGTTCTTCGTAGGATGTATGGCGATGATGGCAGCATCAGCGTTCTTTTTTCTCTCAATGAGCTCTTTTGACAACAAATGGAGAACTTCTATTTTGGTGTCTGGTTTAATTACGTTCATTGCAGCAGTTCACTACTGGTACATGCGTGATTATTGGGCAACTAATATGACCTCTCCTACTTTCTTTAGATATGTAGACTGGGTATTGACTGTTCCATTAATGTGTGTAGAGTTCTATTTAATTTTGAAAGCTGCTGGTGCAACAAAACAATTGATGTGGAAAATGATTTTCGCTTCAATCGTTATGTTAGTTACTGGTTACTTTGGTGAAGCAGTTTACACAACAGGATCAGGTCCTGCTGTTTGGGGACTTATTTCAGGTCTTGCTTACTTCTGGATTGTTTATGAAATCTGGATGGGAAGTGCTTCTAAGCTAGCTGCCTCTGCAGGTGGAGCTGTTCAATCGGCTCATAAAACACTTTGTTGGTTCGTTCTTGTAGGATGGGCAATATATCCAATTGGATACATGGCTGGTACTGAAGGATGGTACAGTGGAATCTTTGGTGGTCTTCCAATGGATGTTATTTATAACGTTGGGGATGCGATCAACAAAATTGGATTTGGTTTAGTTGTATATAACTTAGCTGTTAATTCAAAATATCCTTCGCAGATAAAATTGTTA IDLIMEKILSLMTVVPAMATDDYVGFTFFVGCMAMMAASAFFFLSMSSFDNKWRTSILVSGLITFIAAVHYWYMRDYWATNMTSPTFFRYVDWVLTVPLMCVEFYLILKAAGATKQLMWKMIFASIVMLVTGYFGEAVYTTGSGPAVWGLISGLAYFWIVYEIWMGSASKLAASAGGAVQSAHKTLCWFVLVGWAIYPIGYMAGTEGWYSGIFGGLPMDVIYNVGDAINKIGFGLVVYNLAVNSKYPSQIKLL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGATTTAATTATGGAAAAAATTCTAAGTTTAATGACTGTGGTTCCAGCAATGGCCACTGACGACTACGTTGGATTCACGTTCTTCGTAGGATGTATGGCGATGATGGCAGCATCAGCGTTCTTTTTTCTCTCAATGAGCTCTTTTGACAACAAATGGAGAACTTCTATTTTGGTGTCTGGTTTAATTACGTTCATTGCAGCAGTTCACTACTGGTACATGCGTGATTATTGGGCA---------------------------------------------------ACTAATATGACCTCTCCTACTTTCTTTAGATATGTAGACTGG------------------------GTATTGACTGTTCCATTAATGTGTGTAGAGTTCTATTTAATTTTGAAAGCT---------GCT------GGTGCAACAAAA---CAATTG------------------------------------ATGTGGAAA---ATGATTTTCGCTTCAATCGTTATGTTAGTTACTGGTTACTTTGGTGAA---------GCA------------------GTT------TACACA------------------------------------------------------ACA---------GGA---------------------------TCAGGTCCT------------------GCTGTTTGG---GGACTTATTTCAGGTCTTGCTTACTTCTGGATTGTTTATGAAATC---------------TGG------ATG---GGAAGTGCTTCTAAGCTAGCTGCCTCT------GCA---GGTGGAGCT---GTT---CAA---TCG---GCT---CAT---AAA---ACACTT---TGTTGGTTCGTTCTTGTA---------------------------------------------------------------GGATGG---------GCAATATATCCAATTGGATACATGGCTGGTACTGAAGGA---TGGTAC---------AGT---GGAATCTTTGGTGGTCTTCCA---------------------ATGGATGTTATTTATAACGTTGGGGATGCGATCAACAAAATTGGATTTGGTTTAGTTGTATATAACTTAGCTGTTAATTCAAAATATCCTTCGCAGATAAAATTGTTA--------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------IDLIMEKILSLMTVVPAMATDDYVGFTFFVGCMAMMAASAFFFLSMSSFDNKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------TNMTSPTFFRYVDW--------VLTVPLMCVEFYLILKA---A--GATK-QL------------MWK-MIFASIVMLVTGYFGE---A------V--YT------------------T---G---------SGP------AVW-GLISGLAYFWIVYEI-----W--M-GSASKLAAS--A-GGA-V-Q-S-A-H-K-TL-CWFVLV---------------------GW---AIYPIGYMAGTEG-WY---S-GIFGGLP-------MDVIYNVGDAINKIGFGLVVYNLAVNSKYPSQIKLL------------------------------- [II-CFB-MS024]_1105088900124 [II-CFB-MS024] JCVI_ORF_1105088900124_GS010_Coastal_1m jcvi|1105088900124| 1105088900124 JCVI ORF 1105088900124 1105088900124 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 18-nov-03 Coastal/1m_depth/S_31_psu/GS010/Cape_May/NJ/North_American_East_Coast Atlantic Ocean marine 38.94 -74.685 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATTGATTTAATTATGGAAAAAATTCTAAGTTTAATGACTGTGGTTCCAGCAATGGCCACTGACGACTACGTTGGATTCACGTTCTTCGTAGGATGTATGGCGATGATGGCAGCATCAGCGTTCTTTTTTCTCTCAATGAGCTCTTTTGACAACAAATGGAGAACTTCTATTTTGGTGTCTGGTTTAATTACGTTCATTGCAGCAGTTCACTACTGGTACATGCGTGATTATTGGGCAACTAATATGACCTCTCCTACTTTCTTTAGATATGTAGACTGGGTATTGACTGTTCCATTAATGTGTGTAGAGTTCTATTTAATTTTGAAAGCTGCTGGTGCAACAAAACAATTGATGTGGAAAATGATTTTCGCTTCAATCGTTATGTTAGTTACTGGTTACTTTGGTGAAGCAGTTTACACAACAGGATCAGGTCCTGCTGTTTGGGGACTTATTTCAGGTCTTGCTTACTTCTGGATTGTTTATGAAATCTGGATGGGAAGTGCTTCTAAGCTAGCTGCCTCTGCAGGTGGAGCTGTTCAATCGGCTCATAAAACACTTTGTTGGTTCGTTCTTGTAGGATGGGCAATATATCCAATTGGATACATGGCTGGTACTGAAGGATGGTACAGTGGAATCTTTGGTGGTCTTCCAATGGATGTTATTTATAACGTTGGGGATGCGATCAACAAAATTGGATTTGGTTTAGTTGTATATAACTTAGCTGTTAATTCAAAA IDLIMEKILSLMTVVPAMATDDYVGFTFFVGCMAMMAASAFFFLSMSSFDNKWRTSILVSGLITFIAAVHYWYMRDYWATNMTSPTFFRYVDWVLTVPLMCVEFYLILKAAGATKQLMWKMIFASIVMLVTGYFGEAVYTTGSGPAVWGLISGLAYFWIVYEIWMGSASKLAASAGGAVQSAHKTLCWFVLVGWAIYPIGYMAGTEGWYSGIFGGLPMDVIYNVGDAINKIGFGLVVYNLAVNSK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGATTTAATTATGGAAAAAATTCTAAGTTTAATGACTGTGGTTCCAGCAATGGCCACTGACGACTACGTTGGATTCACGTTCTTCGTAGGATGTATGGCGATGATGGCAGCATCAGCGTTCTTTTTTCTCTCAATGAGCTCTTTTGACAACAAATGGAGAACTTCTATTTTGGTGTCTGGTTTAATTACGTTCATTGCAGCAGTTCACTACTGGTACATGCGTGATTATTGGGCA---------------------------------------------------ACTAATATGACCTCTCCTACTTTCTTTAGATATGTAGACTGG------------------------GTATTGACTGTTCCATTAATGTGTGTAGAGTTCTATTTAATTTTGAAAGCT---------GCT------GGTGCAACAAAA---CAATTG------------------------------------ATGTGGAAA---ATGATTTTCGCTTCAATCGTTATGTTAGTTACTGGTTACTTTGGTGAA---------GCA------------------GTT------TACACA------------------------------------------------------ACA---------GGA---------------------------TCAGGTCCT------------------GCTGTTTGG---GGACTTATTTCAGGTCTTGCTTACTTCTGGATTGTTTATGAAATC---------------TGG------ATG---GGAAGTGCTTCTAAGCTAGCTGCCTCT------GCA---GGTGGAGCT---GTT---CAA---TCG---GCT---CAT---AAA---ACACTT---TGTTGGTTCGTTCTTGTA---------------------------------------------------------------GGATGG---------GCAATATATCCAATTGGATACATGGCTGGTACTGAAGGA---TGGTAC---------AGT---GGAATCTTTGGTGGTCTTCCA---------------------ATGGATGTTATTTATAACGTTGGGGATGCGATCAACAAAATTGGATTTGGTTTAGTTGTATATAACTTAGCTGTTAATTCAAAA--------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------IDLIMEKILSLMTVVPAMATDDYVGFTFFVGCMAMMAASAFFFLSMSSFDNKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------TNMTSPTFFRYVDW--------VLTVPLMCVEFYLILKA---A--GATK-QL------------MWK-MIFASIVMLVTGYFGE---A------V--YT------------------T---G---------SGP------AVW-GLISGLAYFWIVYEI-----W--M-GSASKLAAS--A-GGA-V-Q-S-A-H-K-TL-CWFVLV---------------------GW---AIYPIGYMAGTEG-WY---S-GIFGGLP-------MDVIYNVGDAINKIGFGLVVYNLAVNSK--------------------------------------- [II-CFB-MS024]_EU683554 [II-CFB-MS024] W112_env_samples_EU683554 gi|187711581|gb|EU683554| Uncultured bacterium clone W112 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W112 putative proteorhodopsin gene, partial cds EU683554 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_[near_Yangtzi_River_estuary]_surface_water_[2m] China Sea marine 31.3 122.2 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCGTTTTTCTTTCTCTCAATGAACTCGTTCGACAACAAATGGAAAACTTCTATTTTGGTGTCTGGACTAATTACGTTCATTGCAGCAGTACACTACTGGTACATGCGTGACTATTGGGCAACCAATATGACCTCACCTACTTTCTTTAGATATGTAGACTGGGTATTGACTGTACCGTTAATGTGTGTTGAATTCTATTTAATTCTAAAAGCAGCAGGTGCTACAAAACAACTGATGTGGAAAATGATTTTCGCTTCAATGGTGATGTTAGTAACTGGTTACTTTGGTGAA AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWATNMTSPTFFRYVDWVLTVPLMCVEFYLILKAAGATKQLMWKMIFASMVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCGTTTTTCTTTCTCTCAATGAACTCGTTCGACAACAAATGGAAAACTTCTATTTTGGTGTCTGGACTAATTACGTTCATTGCAGCAGTACACTACTGGTACATGCGTGACTATTGGGCA---------------------------------------------------ACCAATATGACCTCACCTACTTTCTTTAGATATGTAGACTGG------------------------GTATTGACTGTACCGTTAATGTGTGTTGAATTCTATTTAATTCTAAAAGCA---------GCA------GGTGCTACAAAA---CAACTG------------------------------------ATGTGGAAA---ATGATTTTCGCTTCAATGGTGATGTTAGTAACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWA-----------------TNMTSPTFFRYVDW--------VLTVPLMCVEFYLILKA---A--GATK-QL------------MWK-MIFASMVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_1105109246618 [II-CFB-MS024] JCVI_ORF_1105109246618_GS001c_Open_Ocean_5m jcvi|1105109246618| 1105109246618 JCVI ORF 1105109246618 1105109246618 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 15-MAY-2003 Open_Ocean/5m_depth/S_36.7_psu/GS001c/Hydrostation_S/Sargasso_Sea Sargasso Sea marine 32.166668 -64.5 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf GGCTGGAAATTATTATATGCAAACTTTTTAAGCTTATTGACTGTAGCTCCTAAGATGGATACAGGCGATTATGTAGGTTTTACGTTCTTTGTTGGAACAATGGCAATGATGGCTGCATCAGCGTTCTTTTTCCTTTCAATGAACACATTTGACAACAAATGGAGAACCTCTATTTTGGTGTCAGGGCTGATCACTTTCATTGCAGCTGTTCACTACTACTACATGCGTGACTATTGGGCCACTAATATGGAATCACCCACATTTTTCCGTTATGTAGATTGGATTTTAACCGTTCCATTAATGTGTGTAGAATTTTATTTAATTCTTAAAGCAGCTGGGGCTACAAAATCTTTATTATGGAAAATGATTTTCTATTCTGTAGTAATGTTAGTAACTGGTTATTTCGGTGAAGTAGTTTACAACACTGGCTCTGGCCCAGCTATCTGGGGTCTACTTTCGGGTATTGCTTATTTCGCAATAGTGTATGAAATTAAATTCGGTGGTGCTGCTAAACTTGCTGAAGCAGCAGGTGGTGCTGTTCAAAAGGCACACAACACTCTCTTCTGGTTTGTACTTGTAGGTTGGGCGATCTATCCTATCGGTTATATGGCTGGAACAGAAGGTTGGTACAGCGGAATTTTTGGTGGTCTTGAAATGGATGTTGTTTATAACATCGGTGACGCGATTAATAAAATTGGATTTGGTTTGGTTGTTTATAACCTTGCTGTACAATCCAAA GWKLLYANFLSLLTVAPKMDTGDYVGFTFFVGTMAMMAASAFFFLSMNTFDNKWRTSILVSGLITFIAAVHYYYMRDYWATNMESPTFFRYVDWILTVPLMCVEFYLILKAAGATKSLLWKMIFYSVVMLVTGYFGEVVYNTGSGPAIWGLLSGIAYFAIVYEIKFGGAAKLAEAAGGAVQKAHNTLFWFVLVGWAIYPIGYMAGTEGWYSGIFGGLEMDVVYNIGDAINKIGFGLVVYNLAVQSK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCTGGAAATTATTATATGCAAACTTTTTAAGCTTATTGACTGTAGCTCCTAAGATGGATACAGGCGATTATGTAGGTTTTACGTTCTTTGTTGGAACAATGGCAATGATGGCTGCATCAGCGTTCTTTTTCCTTTCAATGAACACATTTGACAACAAATGGAGAACCTCTATTTTGGTGTCAGGGCTGATCACTTTCATTGCAGCTGTTCACTACTACTACATGCGTGACTATTGGGCC---------------------------------------------------ACTAATATGGAATCACCCACATTTTTCCGTTATGTAGATTGG------------------------ATTTTAACCGTTCCATTAATGTGTGTAGAATTTTATTTAATTCTTAAAGCA---------GCT------GGGGCTACAAAA---TCTTTA------------------------------------TTATGGAAA---ATGATTTTCTATTCTGTAGTAATGTTAGTAACTGGTTATTTCGGTGAA---------GTA------------------GTT------TACAAC------------------------------------------------------------------------------------------------ACTGGCTCT------------GGCCCAGCTATCTGG---GGTCTACTTTCGGGTATTGCTTATTTCGCAATAGTGTATGAAATT---------------AAA------TTC---GGTGGTGCTGCTAAACTTGCTGAAGCA------GCA---GGTGGTGCT---GTT---CAA---AAG---GCA---CAC---AAC---ACTCTC---TTCTGGTTTGTACTTGTA---------------------------------------------------------------GGTTGG---------GCGATCTATCCTATCGGTTATATGGCTGGAACAGAAGGT---TGGTAC---------AGC---GGAATTTTTGGTGGTCTTGAA---------------------ATGGATGTTGTTTATAACATCGGTGACGCGATTAATAAAATTGGATTTGGTTTGGTTGTTTATAACCTTGCTGTACAATCCAAA--------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------GWKLLYANFLSLLTVAPKMDTGDYVGFTFFVGTMAMMAASAFFFLSMNTFDNKWRTSILVSGLITFIAAVHYYYMRDYWA-----------------TNMESPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GATK-SL------------LWK-MIFYSVVMLVTGYFGE---V------V--YN--------------------------------TGS----GPAIW-GLLSGIAYFAIVYEI-----K--F-GGAAKLAEA--A-GGA-V-Q-K-A-H-N-TL-FWFVLV---------------------GW---AIYPIGYMAGTEG-WY---S-GIFGGLE-------MDVVYNIGDAINKIGFGLVVYNLAVQSK--------------------------------------- [II-CFB-MS024]_JX863201 [II-CFB-MS024] MALINA_OTU34_366_M_env_samples_JX863201 gi|425477352|gb|JX863201| Uncultured bacterium clone MALINA OTU34 366 M putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU34 366 M putative proteorhodopsin gene, partial cds JX863201 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 08-juil-09 0m_depth Pacific Ocean marine 53.36 -159.29 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGATTCTTACTGTTCCATTGATGTGTGTTGAATTCTACCTTATATTGAAGGTCGCTGGCGCAACAAAAAAACTGATGTGGACATTGATTGGAGCTTCAGTTGTAATGTTAGTAACTGGTTATTGGGGAGAAGCGATTCCTGGTTCTAATTCCGCTCTTTGGGGAGCTGCTTCCGGTGCTGCTTATTTTTACATAGTATATTTGATTTTCTTCGGAGAAGCAAAAACTCTTGCAACGCAAGCAGGTGGCCATGTTCTAAGTGCTCACAATATTCTGTGTAAATTCGTTCTAATA WILTVPLMCVEFYLILKVAGATKKLMWTLIGASVVMLVTGYWGEAIPGSNSALWGAASGAAYFYIVYLIFFGEAKTLATQAGGHVLSAHNILCKFVLI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------ATTCTTACTGTTCCATTGATGTGTGTTGAATTCTACCTTATATTGAAGGTC---------GCT------GGCGCAACAAAA---AAACTG------------------------------------ATGTGGACA---TTGATTGGAGCTTCAGTTGTAATGTTAGTAACTGGTTATTGGGGAGAA---------GCG------------------ATT------CCTGGT------------------------------------------------------------------------------------------------TCTAATTCC------------------GCTCTTTGG---GGAGCTGCTTCCGGTGCTGCTTATTTTTACATAGTATATTTGATT---------------TTC------TTC---GGAGAAGCAAAAACTCTTGCAACGCAA------GCA---GGTGGCCAT---GTT---CTA---AGT---GCT---CAC---AAT---ATTCTG---TGTAAATTCGTTCTAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------ILTVPLMCVEFYLILKV---A--GATK-KL------------MWT-LIGASVVMLVTGYWGE---A------I--PG--------------------------------SNS------ALW-GAASGAAYFYIVYLI-----F--F-GEAKTLATQ--A-GGH-V-L-S-A-H-N-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_EU683528 [II-CFB-MS024] A903_3_env_samples_EU683528 gi|187711529|gb|EU683528| Uncultured bacterium clone A903 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A903 putative proteorhodopsin gene, partial cds EU683528 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_surface_water_[2m] China Sea marine 22 114 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCTGCTTCTGCGTTCTTTTTCTTGTCTATGAATTCATTTGACAAGAAGTGGCGCACCTCTATTTTGGTGTCTGGTTTGATAACATTTATCGCTGCAGTACACTATTATTACATGCGTGACTATTGGGCTGCTACTGAAGACTCGCCAACTTTCTTTAGATATGTTGATTGGGTACTAACAGTTCCATTGATGTGTGTAGAGTTTTACTTAATTCTTAGAGCTGCTGGTGCGACTAAAAAGTTAATGTGGACTCTAATTGCAGCGTCAACTGTTATGTTAGTTACTGGTTACATTGGTGAA AMMAASAFFFLSMNSFDKKWRTSILVSGLITFIAAVHYYYMRDYWAATEDSPTFFRYVDWVLTVPLMCVEFYLILRAAGATKKLMWTLIAASTVMLVTGYIGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCTGCTTCTGCGTTCTTTTTCTTGTCTATGAATTCATTTGACAAGAAGTGGCGCACCTCTATTTTGGTGTCTGGTTTGATAACATTTATCGCTGCAGTACACTATTATTACATGCGTGACTATTGGGCT---------------------------------------------------GCTACTGAAGACTCGCCAACTTTCTTTAGATATGTTGATTGG------------------------GTACTAACAGTTCCATTGATGTGTGTAGAGTTTTACTTAATTCTTAGAGCT---------GCT------GGTGCGACTAAA---AAGTTA------------------------------------ATGTGGACT---CTAATTGCAGCGTCAACTGTTATGTTAGTTACTGGTTACATTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDKKWRTSILVSGLITFIAAVHYYYMRDYWA-----------------ATEDSPTFFRYVDW--------VLTVPLMCVEFYLILRA---A--GATK-KL------------MWT-LIAASTVMLVTGYIGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_1105094586454 [II-CFB-MS024] JCVI_ORF_1105094586454_GS025_Fringing_Reef_2m jcvi|1105094586454| 1105094586454 JCVI ORF 1105094586454 1105094586454 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.8_3.0 other #na 28-janv-04 Fringing_Reef/2m_depth/S_31.4_psu/GS025/Dirty_Rock/Cocos_Island/Eastern_Tropical_Pacific Pacific Ocean marine 5.552778 -87.087776 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGGAAACTTTAAACAATTTTTTTCTTGCTGTGCCAAAAATGGCTACCGACGATTATGTAGGTTTTACATTTTTCGTTGGGTGTATGGCTATGATGGCAGCATCAGCGTTTTTCTTTCTATCGATGAGTTCATTCGATAAAAAGTGGCGCACATCAATACTAGTGTCTGGTTTGATTACGTTTATCGCAGCAGTACACTACTATTACATGAGAGATTATTGGGCTACCAATGCAGAATCTCCGACATTTTTCAGATATGTTGACTGGATCTTGACCGTTCCGTTAATGTGTGTTGAATTCTACTTAATCTTAAAAGCAGCTGGTGCTACTAAAAGATTAATGTGGATACTAATTGTAGCATCTACTGTAATGTTAGTTACAGGATACATGGGTGAAGGTGTAGACCAGGCAAACGCTCAAGTTTGGGGTGCTGTTTCTGGAGCTGCTTACTTTTACATAGTATATTTGATATGGTTCGGTGAAGCTAAGGCACTTGCTACATCTGCAGGTGGAGAAACACTGAAAGCTCACAATATCTTATGTAAATTTGTTCTTATTGGATGGGCAATATATCCAATTGGGTATATGGCTGGAACTCCAGGATGGTACGAAGGTATATTTGGTGGCTTAGATATGGATGTAATCTACAACGTAGGTGATGCTATCAACAAAATAGGTTTTGGATTAGTTGTTTATAATTTAGCAGTTAATTCATCAAAACAAGCAGCAGCTGCA METLNNFFLAVPKMATDDYVGFTFFVGCMAMMAASAFFFLSMSSFDKKWRTSILVSGLITFIAAVHYYYMRDYWATNAESPTFFRYVDWILTVPLMCVEFYLILKAAGATKRLMWILIVASTVMLVTGYMGEGVDQANAQVWGAVSGAAYFYIVYLIWFGEAKALATSAGGETLKAHNILCKFVLIGWAIYPIGYMAGTPGWYEGIFGGLDMDVIYNVGDAINKIGFGLVVYNLAVNSSKQAAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGAAACTTTAAACAATTTTTTTCTTGCTGTGCCAAAAATGGCTACCGACGATTATGTAGGTTTTACATTTTTCGTTGGGTGTATGGCTATGATGGCAGCATCAGCGTTTTTCTTTCTATCGATGAGTTCATTCGATAAAAAGTGGCGCACATCAATACTAGTGTCTGGTTTGATTACGTTTATCGCAGCAGTACACTACTATTACATGAGAGATTATTGGGCT---------------------------------------------------ACCAATGCAGAATCTCCGACATTTTTCAGATATGTTGACTGG------------------------ATCTTGACCGTTCCGTTAATGTGTGTTGAATTCTACTTAATCTTAAAAGCA---------GCT------GGTGCTACTAAA---AGATTA------------------------------------ATGTGGATA---CTAATTGTAGCATCTACTGTAATGTTAGTTACAGGATACATGGGTGAA---------GGT------------------GTA------GACCAG------------------------------------------------------------------------------------------------GCAAACGCT------------------CAAGTTTGG---GGTGCTGTTTCTGGAGCTGCTTACTTTTACATAGTATATTTGATA---------------TGG------TTC---GGTGAAGCTAAGGCACTTGCTACATCT------GCA---GGTGGAGAA---ACA---CTG---AAA---GCT---CAC---AAT---ATCTTA---TGTAAATTTGTTCTTATT---------------------------------------------------------------GGATGG---------GCAATATATCCAATTGGGTATATGGCTGGAACTCCAGGA---TGGTAC---------GAA---GGTATATTTGGTGGCTTAGAT---------------------ATGGATGTAATCTACAACGTAGGTGATGCTATCAACAAAATAGGTTTTGGATTAGTTGTTTATAATTTAGCAGTTAATTCATCAAAACAAGCAGCAGCTGCA--------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------METLNNFFLAVPKMATDDYVGFTFFVGCMAMMAASAFFFLSMSSFDKKWRTSILVSGLITFIAAVHYYYMRDYWA-----------------TNAESPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GATK-RL------------MWI-LIVASTVMLVTGYMGE---G------V--DQ--------------------------------ANA------QVW-GAVSGAAYFYIVYLI-----W--F-GEAKALATS--A-GGE-T-L-K-A-H-N-IL-CKFVLI---------------------GW---AIYPIGYMAGTPG-WY---E-GIFGGLD-------MDVIYNVGDAINKIGFGLVVYNLAVNSSKQAAAA--------------------------------- [II-CFB-MS024]_1105123409906 [II-CFB-MS024] JCVI_ORF_1105123409906_GS007_Coastal_1m jcvi|1105123409906| 1105123409906 JCVI ORF 1105123409906 1105123409906 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 25-AUG-2003 Coastal/1m_depth/S_31.7_psu/GS007/Northern_Gulf_of_Maine/North_American_East_Coast Atlantic Ocean marine 43.63222 -66.84722 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf TTGAATATGGAAACTTTAAATAATATGTTACTCGCAGTACCCAAAATGGCTACTGATGATTATGTTGGTTTTACATTTTTTGTAGGATGTATGGCCATGATGGCGGCTTCGGCCTTCTTTTTCTTATCAATGAATTCTTTTGACGCAAAATGGAGAACTTCTATTTTAGTCTCAGGACTCATTACTTTTATAGCAGCAGTTCACTACTATTACATGCGTGATTACTGGGCTACTAACGCTGAATCTCCAACATTTTTTAGATATGTTGATTGGATTCTAACTGTACCATTAATGTGTGTAGAATTTTATTTAATTCTAAGAGCAGCTGGTGCAACTAAAAGATTAATGTGGACTCTTATTTTAGCATCTACAGTAATGTTAGTAACTGGATATGCTGGTGAAGGTGTAGACCAAGCAAATGCCCAAGTATGGGGAGCTGTTTCTGGTGCTGCTTACTTTTACATAGTGTATATAATCTGGTTCGGAGAGGCAAAAGCATTAGCTACTTCAGCTGGTGGTGAAGTTCTTAAGGCTCACAATATTCTATGTAAATTTGTATTAATAGGATGGGCAATTTATCCAATTGGATATATGGCTGGTACTCCAGGTTGGTATGAAGGAATATTTGGTGGATTAGACATGGATGTTATTTATAACATTGGTGATGCTATCAATAAAATTGGTTTTGGTCTAGTTGTTTACAACTTAGCTGTTTCTTCTTCTTCGAAG LNMETLNNMLLAVPKMATDDYVGFTFFVGCMAMMAASAFFFLSMNSFDAKWRTSILVSGLITFIAAVHYYYMRDYWATNAESPTFFRYVDWILTVPLMCVEFYLILRAAGATKRLMWTLILASTVMLVTGYAGEGVDQANAQVWGAVSGAAYFYIVYIIWFGEAKALATSAGGEVLKAHNILCKFVLIGWAIYPIGYMAGTPGWYEGIFGGLDMDVIYNIGDAINKIGFGLVVYNLAVSSSSK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAATATGGAAACTTTAAATAATATGTTACTCGCAGTACCCAAAATGGCTACTGATGATTATGTTGGTTTTACATTTTTTGTAGGATGTATGGCCATGATGGCGGCTTCGGCCTTCTTTTTCTTATCAATGAATTCTTTTGACGCAAAATGGAGAACTTCTATTTTAGTCTCAGGACTCATTACTTTTATAGCAGCAGTTCACTACTATTACATGCGTGATTACTGGGCT---------------------------------------------------ACTAACGCTGAATCTCCAACATTTTTTAGATATGTTGATTGG------------------------ATTCTAACTGTACCATTAATGTGTGTAGAATTTTATTTAATTCTAAGAGCA---------GCT------GGTGCAACTAAA---AGATTA------------------------------------ATGTGGACT---CTTATTTTAGCATCTACAGTAATGTTAGTAACTGGATATGCTGGTGAA---------GGT------------------GTA------GACCAA------------------------------------------------------------------------------------------------GCAAATGCC------------------CAAGTATGG---GGAGCTGTTTCTGGTGCTGCTTACTTTTACATAGTGTATATAATC---------------TGG------TTC---GGAGAGGCAAAAGCATTAGCTACTTCA------GCT---GGTGGTGAA---GTT---CTT---AAG---GCT---CAC---AAT---ATTCTA---TGTAAATTTGTATTAATA---------------------------------------------------------------GGATGG---------GCAATTTATCCAATTGGATATATGGCTGGTACTCCAGGT---TGGTAT---------GAA---GGAATATTTGGTGGATTAGAC---------------------ATGGATGTTATTTATAACATTGGTGATGCTATCAATAAAATTGGTTTTGGTCTAGTTGTTTACAACTTAGCTGTTTCTTCTTCTTCGAAG--------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------LNMETLNNMLLAVPKMATDDYVGFTFFVGCMAMMAASAFFFLSMNSFDAKWRTSILVSGLITFIAAVHYYYMRDYWA-----------------TNAESPTFFRYVDW--------ILTVPLMCVEFYLILRA---A--GATK-RL------------MWT-LILASTVMLVTGYAGE---G------V--DQ--------------------------------ANA------QVW-GAVSGAAYFYIVYII-----W--F-GEAKALATS--A-GGE-V-L-K-A-H-N-IL-CKFVLI---------------------GW---AIYPIGYMAGTPG-WY---E-GIFGGLD-------MDVIYNIGDAINKIGFGLVVYNLAVSSSSK------------------------------------- [II-CFB-MS024]_AB557568 [II-CFB-MS024] SG13_Flavobacteriia_AB557568 gi|376317470|gb|AB557568| Flavobacteria bacterium SG13 PR gene for proteorhodopsin, partial cds Flavobacteria bacterium SG13 PR gene for proteorhodopsin, partial cds AB557568 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia] taxon:754434 genomic_DNA strain 03MAY2012 #na seawater Pacific Ocean marine 35 139.3333 Diversity and functional analysis of proteorhodopsin in marine Flavobacteria Yoshizawa,S., Kawanabe,A., Ito,H., Kandori,H. and Kogure,K. Environ. Microbiol. 14 (5), 12401248 (2012) 22329552 #na TGTATGGCTATGATGGCTGCTTCAGCTTTTTTCTTTCTTTCAATGAATAACTTTGATAGAAAATGGAAAACATCAATATTAGTTTCTGGATTAATTACCTTTATAGCTGCAGTACACTACTGGTATATGCGTGACTATTGGGTAACTAATGCAGAATCACCAACATTTTTTAGATACATAGATTGGGTATTAACTGTACCTTTAATGTGTGTAGAATTTTATTTGATTTTAAAAGTTGCGGGTGCCAAAAAATCACTTATGTGGAAACTTATTATCGCATCAGTCATTATGCTCGTAACTGGTTATTTTGGTGAAGCTGTATATAGAAATGAAGCTCAAATATGGGGGTTAATTTCTGGAATAGCTTACTTCTATATAGTTTATGAAATATGGTTAGGTAGCGCCAAAAAACTTGCTGAAAAAGCTGGAGGAGCAGTATTATCCGCCCACAAAACA CMAMMAASAFFFLSMNNFDRKWKTSILVSGLITFIAAVHYWYMRDYWVTNAESPTFFRYIDWVLTVPLMCVEFYLILKVAGAKKSLMWKLIIASVIMLVTGYFGEAVYRNEAQIWGLISGIAYFYIVYEIWLGSAKKLAEKAGGAVLSAHKT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTATGGCTATGATGGCTGCTTCAGCTTTTTTCTTTCTTTCAATGAATAACTTTGATAGAAAATGGAAAACATCAATATTAGTTTCTGGATTAATTACCTTTATAGCTGCAGTACACTACTGGTATATGCGTGACTATTGGGTA---------------------------------------------------ACTAATGCAGAATCACCAACATTTTTTAGATACATAGATTGG------------------------GTATTAACTGTACCTTTAATGTGTGTAGAATTTTATTTGATTTTAAAAGTT---------GCG------GGTGCCAAAAAA---TCACTT------------------------------------ATGTGGAAA---CTTATTATCGCATCAGTCATTATGCTCGTAACTGGTTATTTTGGTGAA---------GCT------------------GTA------TATAGA------------------------------------------------------------------------------------------------AATGAAGCT------------------CAAATATGG---GGGTTAATTTCTGGAATAGCTTACTTCTATATAGTTTATGAAATA---------------TGG------TTA---GGTAGCGCCAAAAAACTTGCTGAAAAA------GCT---GGAGGAGCA---GTA---TTA---TCC---GCC---CAC---AAA---ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------CMAMMAASAFFFLSMNNFDRKWKTSILVSGLITFIAAVHYWYMRDYWV-----------------TNAESPTFFRYIDW--------VLTVPLMCVEFYLILKV---A--GAKK-SL------------MWK-LIIASVIMLVTGYFGE---A------V--YR--------------------------------NEA------QIW-GLISGIAYFYIVYEI-----W--L-GSAKKLAEK--A-GGA-V-L-S-A-H-K-T---------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_EF202344 [II-CFB-MS024] Flavobacteria_MS024_3C_ctg90_genome_EF202344 gi|124109475|gb|EF202344| Uncultured Flavobacteria bacterium clone MS0243C proteorhodopsin gene, partial cds Uncultured Flavobacteria bacterium clone MS0243C proteorhodopsin gene, partial cds EF202344 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/environmental samples] taxon:212695 genomic_DNA other 24May-2007 28-mars-05 Boothbay_Harbor/1m_depth Atlantic Ocean marine 43.8444 -69.6410 Matching phylogeny and metabolism in the uncultured marine bacteria, one cell at a time Stepanauskas,R. and Sieracki,M.E. Proc. Natl. Acad. Sci. U.S.A. 104 (21), 90529057 (2007) 17502618 whole genome amplification products of a single uncultured cell ATGCAAAATTTATTCGCATCCCTTCCTTTAGCTGCCCAAATGGCAACTGATGATTATGTTGGCTTCACATTCTTTGTAGGGTGTATGGCTATGATGGCTGCTTCTGCATTTTTCTTCTTATCCATGAACGGATTTGACAAAAAATGGAGAACTTCTATCCTTGTATCTGGACTAATTACTTTCATTGCCGCAGTTCACTATTGGTATATGAGAGACTATTGGGCAGATTTTGGAGAATCTCCAACTTTCTTTAGATACGTAGACTGGATTCTTACAGTTCCATTAATGTGTGTAGAATTCTATTTAATCTTAAAAGCTGCAGGTGCTAAAAAATCCTTGATGTGGAGAATGATCTTTTTCTCTGTAATCATGTTAGTAACAGGATATATTGGAGAAGCAGTAAATAGAGATATGGCTCAAATATGGGGACTAATCTCAGGATTGGCTTACTTTGCTATAGTCTATGATATTTGGTTTGGTGAAGCTAAAAAGTTAGCAGAAGCAGCAGGTGGTGCAGTCTTAAGTGCGCACAAAACCTTATGCTGGTTTGTACTTGTAGGATGGGCTATCTATCCTATTGGATACATGGCTGGTACTCCAGGATGGTACGATGGTATCTTTGGAGGATTAGATTTAGATATTGTTTACAACATTGGAGATGCTGTAAATAAAATTGGATTTGGATTGGTTATTTACGGATTGGCAGTGGCCAAGTCTGAAGAAAAA MQNLFASLPLAAQMATDDYVGFTFFVGCMAMMAASAFFFLSMNGFDKKWRTSILVSGLITFIAAVHYWYMRDYWADFGESPTFFRYVDWILTVPLMCVEFYLILKAAGAKKSLMWRMIFFSVIMLVTGYIGEAVNRDMAQIWGLISGLAYFAIVYDIWFGEAKKLAEAAGGAVLSAHKTLCWFVLVGWAIYPIGYMAGTPGWYDGIFGGLDLDIVYNIGDAVNKIGFGLVIYGLAVAKSEEK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCAAAATTTATTCGCATCCCTTCCTTTAGCTGCCCAAATGGCAACTGATGATTATGTTGGCTTCACATTCTTTGTAGGGTGTATGGCTATGATGGCTGCTTCTGCATTTTTCTTCTTATCCATGAACGGATTTGACAAAAAATGGAGAACTTCTATCCTTGTATCTGGACTAATTACTTTCATTGCCGCAGTTCACTATTGGTATATGAGAGACTATTGGGCA---------------------------------------------------GATTTTGGAGAATCTCCAACTTTCTTTAGATACGTAGACTGG------------------------ATTCTTACAGTTCCATTAATGTGTGTAGAATTCTATTTAATCTTAAAAGCT---------GCA------GGTGCTAAAAAA---TCCTTG------------------------------------ATGTGGAGA---ATGATCTTTTTCTCTGTAATCATGTTAGTAACAGGATATATTGGAGAA---------GCA------------------GTA------AATAGA------------------------------------------------------------------------------------------------GATATGGCT------------------CAAATATGG---GGACTAATCTCAGGATTGGCTTACTTTGCTATAGTCTATGATATT---------------TGG------TTT---GGTGAAGCTAAAAAGTTAGCAGAAGCA------GCA---GGTGGTGCA---GTC---TTA---AGT---GCG---CAC---AAA---ACCTTA---TGCTGGTTTGTACTTGTA---------------------------------------------------------------GGATGG---------GCTATCTATCCTATTGGATACATGGCTGGTACTCCAGGA---TGGTAC---------GAT---GGTATCTTTGGAGGATTAGAT---------------------TTAGATATTGTTTACAACATTGGAGATGCTGTAAATAAAATTGGATTTGGATTGGTTATTTACGGATTGGCAGTGGCCAAGTCTGAAGAAAAA------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------MQNLFASLPLAAQMATDDYVGFTFFVGCMAMMAASAFFFLSMNGFDKKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------DFGESPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GAKK-SL------------MWR-MIFFSVIMLVTGYIGE---A------V--NR--------------------------------DMA------QIW-GLISGLAYFAIVYDI-----W--F-GEAKKLAEA--A-GGA-V-L-S-A-H-K-TL-CWFVLV---------------------GW---AIYPIGYMAGTPG-WY---D-GIFGGLD-------LDIVYNIGDAVNKIGFGLVIYGLAVAKSEEK------------------------------------ [II-CFB-MS024]_EU683535 [II-CFB-MS024] A9010_02_env_samples_EU683535 gi|187711543|gb|EU683535| Uncultured bacterium clone A9010 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A9010 putative proteorhodopsin gene, partial cds EU683535 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_surface_water_[2m] China Sea marine 22 114 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCTGTTTTTTTCTTTTTTTTAATGAATACTTTTGAAAAAAAATGGCGAACATCCATCCTTGTTTCAGGTCTCATAACTTTTATAGCAGCAGTGCATTATTGGTATATGAGAGACTATTGGGGACAATTTGGAGAATCTCCTACATTTTTTAGGTATGTAGATTGGATTTTAACTGTTCCGTTAATGTGTGTTGAATTCTATTTAATCTTAAAGGTAGCGGGTGCGAAAAAGTCACTAATGTGGAGAATGATTACCTTCTCTGTTGTAATGCTTGTAACTGGATACTTTGGTGAA AMMAASVFFFFLMNTFEKKWRTSILVSGLITFIAAVHYWYMRDYWGQFGESPTFFRYVDWILTVPLMCVEFYLILKVAGAKKSLMWRMITFSVVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCTGTTTTTTTCTTTTTTTTAATGAATACTTTTGAAAAAAAATGGCGAACATCCATCCTTGTTTCAGGTCTCATAACTTTTATAGCAGCAGTGCATTATTGGTATATGAGAGACTATTGGGGA---------------------------------------------------CAATTTGGAGAATCTCCTACATTTTTTAGGTATGTAGATTGG------------------------ATTTTAACTGTTCCGTTAATGTGTGTTGAATTCTATTTAATCTTAAAGGTA---------GCG------GGTGCGAAAAAG---TCACTA------------------------------------ATGTGGAGA---ATGATTACCTTCTCTGTTGTAATGCTTGTAACTGGATACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFFLMNTFEKKWRTSILVSGLITFIAAVHYWYMRDYWG-----------------QFGESPTFFRYVDW--------ILTVPLMCVEFYLILKV---A--GAKK-SL------------MWR-MITFSVVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_FJ560767 [II-CFB-Dokdonia] HEL26_env_samples_FJ560767 gi|223868681|gb|FJ560767| Uncultured microorganism clone HEL26 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL26 putative proteorhodopsin gene, partial cds FJ560767 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTTCCGTTGATGTGCGTTGAATTCTACCTCATCCTGAAAGCGGCGGGTGCTCAAACAGGTTTGCTTTGGAAGCTCATCTGGGCTTCAGTAGTGATGCTAGTAACGGGTTATGTGGGAGAAGCAGTATATGCTGATCAAGCCGCTCTATGGGGCTTATTCTCAGGTATTGCATACTTCTACATTGTTTACCTCATCATGTTTGGCGAGGCGAAAGCATTGGCGGATAAGTCTTCTGCATCCGTTCAAAAGACAGGACGGCATTTTATGCAA TVPLMCVEFYLILKAAGAQTGLLWKLIWASVVMLVTGYVGEAVYADQAALWGLFSGIAYFYIVYLIMFGEAKALADKSSASVQKTGRHFMQ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTTCCGTTGATGTGCGTTGAATTCTACCTCATCCTGAAAGCG---------GCG------GGTGCTCAAACA---GGTTTG------------------------------------CTTTGGAAG---CTCATCTGGGCTTCAGTAGTGATGCTAGTAACGGGTTATGTGGGAGAA---------GCA------------------GTA------TATGCT------------------------------------------------------------------------------------------------GATCAAGCC------------------GCTCTATGG---GGCTTATTCTCAGGTATTGCATACTTCTACATTGTTTACCTCATC---------------ATG------TTT---GGCGAGGCGAAAGCATTGGCGGATAAG------TCT---TCTGCATCC---GTT---CAA---AAG---ACA---GGA---CGG---CATTTT---ATGCAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLMCVEFYLILKA---A--GAQT-GL------------LWK-LIWASVVMLVTGYVGE---A------V--YA--------------------------------DQA------ALW-GLFSGIAYFYIVYLI-----M--F-GEAKALADK--S-SAS-V-Q-K-T-G-R-HF-MQ------------------------------------------------------------------------------------------------------------------------------------ [II-CFB-Dokdonia]_FJ560804 [II-CFB-Dokdonia] HEL78_env_samples_FJ560804 gi|223868755|gb|FJ560804| Uncultured microorganism clone HEL78 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL78 putative proteorhodopsin gene, partial cds FJ560804 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na GTTCCGTTGATGTGCGTTGAATTCTACCTCATCCTGAAAGCGGCGGGTGCTCAAACAGGTTTGCTTTGGAAGCTCATCTGGGCTTCAGTAGTGATGCTAGTAACGGGTTATGTGGGAGAAGCAGTATATGCTGATCAAGCCGCTCTATGGGGCTTATTCTCAGGTATTGCATACTTCTACATTGTTTACCTCATCATGTTTGGCGAGGCGAAAGCATTGGCGGATAAGTCTTCTGCATCCGTTCAAAAGGCACACGGCATTTTATGCAAA VPLMCVEFYLILKAAGAQTGLLWKLIWASVVMLVTGYVGEAVYADQAALWGLFSGIAYFYIVYLIMFGEAKALADKSSASVQKAHGILCK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTCCGTTGATGTGCGTTGAATTCTACCTCATCCTGAAAGCG---------GCG------GGTGCTCAAACA---GGTTTG------------------------------------CTTTGGAAG---CTCATCTGGGCTTCAGTAGTGATGCTAGTAACGGGTTATGTGGGAGAA---------GCA------------------GTA------TATGCT------------------------------------------------------------------------------------------------GATCAAGCC------------------GCTCTATGG---GGCTTATTCTCAGGTATTGCATACTTCTACATTGTTTACCTCATC---------------ATG------TTT---GGCGAGGCGAAAGCATTGGCGGATAAG------TCT---TCTGCATCC---GTT---CAA---AAG---GCA---CAC---GGC---ATTTTA---TGCAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VPLMCVEFYLILKA---A--GAQT-GL------------LWK-LIWASVVMLVTGYVGE---A------V--YA--------------------------------DQA------ALW-GLFSGIAYFYIVYLI-----M--F-GEAKALADK--S-SAS-V-Q-K-A-H-G-IL-CK------------------------------------------------------------------------------------------------------------------------------------ [II-CFB-Dokdonia]_FJ560757 [II-CFB-Dokdonia] HEL11_env_samples_FJ560757 gi|223868661|gb|FJ560757| Uncultured microorganism clone HEL11 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL11 putative proteorhodopsin gene, partial cds FJ560757 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACGGTTCCGTTGATGTGCGTTGAATTCTACCTCATCCTGAAAGCGGCTGGTGCGAAGACAGGACTGTTGTGGAAACTCATTTGGGCATCCGTTATGATGCTTGTTACAGGTTACTTCGGAGAGGCAGTATACACGGTCGAAAATGGCTACGACAATGGTCCATGGATATGGGGATTATTCTCTGGAATAGCCTACTTCTACATCGTATACCTGATTATGTTCGGCGAAGCGAGAGCCTTGGCTGACAAGTCTTCTGCCTCAGTGCAACGTGCCCGACAACATTCTTTGCAA TVPLMCVEFYLILKAAGAKTGLLWKLIWASVMMLVTGYFGEAVYTVENGYDNGPWIWGLFSGIAYFYIVYLIMFGEARALADKSSASVQRARQHSLQ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGGTTCCGTTGATGTGCGTTGAATTCTACCTCATCCTGAAAGCG---------GCT------GGTGCGAAGACA---GGACTG------------------------------------TTGTGGAAA---CTCATTTGGGCATCCGTTATGATGCTTGTTACAGGTTACTTCGGAGAG---------GCA------------------GTA------TACACG---------------------------------------------------GTCGAA---------AATGGCTACGAC------------------AATGGTCCA------------------TGGATATGG---GGATTATTCTCTGGAATAGCCTACTTCTACATCGTATACCTGATT---------------ATG------TTC---GGCGAAGCGAGAGCCTTGGCTGACAAG------TCT---TCTGCCTCA---GTG---CAA---CGT---GCC---CGA---CAACATTCTTTG---CAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLMCVEFYLILKA---A--GAKT-GL------------LWK-LIWASVMMLVTGYFGE---A------V--YT-----------------VE---NGYD------NGP------WIW-GLFSGIAYFYIVYLI-----M--F-GEARALADK--S-SAS-V-Q-R-A-R-QHSL-Q------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_JX312355 [II-CFB-Dokdonia] Maribacter_sp_DIK-SED-293_JX312355 gi|404428517|gb|JX312355| Maribacter sp. DIK-SED-293 proteorhodpsin (PR) gene, partial cds. Maribacter sp. DIK-SED-293 proteorhodpsin (PR) gene, partial cds. JX312355 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Maribacter] taxon:1221365 genomic DNA strain 30-sept-13 #na #na #na #na #na Phylogenetic characterization of culturable proteorhodopsin-bearing flavobacteria in marine sediments Li,N. and Kim,J.S. Unpublished #na #na ATGGCCATGATGGCCGCTGCCGCTTTTTTCTTTCTTTCCTTAAGTCAATTTGACACCAAATGGAGAACTTCCATTCTAGTTTCAGGATTGATTACGTTCATCGCCGCCGTACACTATTGGTACATGCGGGATTATTGGGCCACTGTAGGCGAATCCCCAACATTCTTTAGATATGTGGATTGGGTGCTTACCGTACCATTAATGTGTGTGGAGTTCTACTTGATTTTAAAAGTGGCAGGAGCAAAAAAATCCTTAATGTGGAAATTGATATTTGCATCGGTCATCATGCTAGTAACAGGATATTTTGGAGAAACGATTTACAACACCGGTAGTGGACCAGCTATTTGGGGTCTAATTTCAGGACTAGCTTATTTCTATATTGTATATGAAATATGGTTCGGTACGGCTAAAAAATTGGCGGAAAAT MAMMAAAAFFFLSLSQFDTKWRTSILVSGLITFIAAVHYWYMRDYWATVGESPTFFRYVDWVLTVPLMCVEFYLILKVAGAKKSLMWKLIFASVIMLVTGYFGETIYNTGSGPAIWGLISGLAYFYIVYEIWFGTAKKLAEN ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGCCATGATGGCCGCTGCCGCTTTTTTCTTTCTTTCCTTAAGTCAATTTGACACCAAATGGAGAACTTCCATTCTAGTTTCAGGATTGATTACGTTCATCGCCGCCGTACACTATTGGTACATGCGGGATTATTGGGCC---------------------------------------------------ACTGTAGGCGAATCCCCAACATTCTTTAGATATGTGGATTGG------------------------GTGCTTACCGTACCATTAATGTGTGTGGAGTTCTACTTGATTTTAAAAGTG---------GCA------GGAGCAAAAAAA---TCCTTA------------------------------------ATGTGGAAA---TTGATATTTGCATCGGTCATCATGCTAGTAACAGGATATTTTGGAGAA---------ACG------------------ATT------TACAAC------------------------------------------------------ACC---------GGT---------------------------AGTGGACCA------------------GCTATTTGG---GGTCTAATTTCAGGACTAGCTTATTTCTATATTGTATATGAAATA---------------TGG------TTC---GGTACGGCTAAAAAATTGGCGGAAAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------MAMMAAAAFFFLSLSQFDTKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------TVGESPTFFRYVDW--------VLTVPLMCVEFYLILKV---A--GAKK-SL------------MWK-LIFASVIMLVTGYFGE---T------I--YN------------------T---G---------SGP------AIW-GLISGLAYFYIVYEI-----W--F-GTAKKLAEN------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_JX312354 [II-CFB-Dokdonia] Sediminicola_sp_SOR-SED-394_JX312354 gi|404428515|gb|JX312354| Sediminicola sp. SOR-SED-394 proteorhodpsin (PR) gene, partial cds. Sediminicola sp. SOR-SED-394 proteorhodpsin (PR) gene, partial cds. JX312354 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Sediminicola] taxon:1221367 genomic DNA strain 30-sept-13 #na #na #na #na #na Phylogenetic characterization of culturable proteorhodopsin-bearing flavobacteria in marine sediments Li,N. and Kim,J.S. Unpublished #na #na ATGGCCATGATGGCTGCATCTGCCTTCTTTTTCTTTTCAATGAATGATTTTGACACTAAATGGAAAACCTCTATTCTGGTTTCTGGTCTTATTACATTTATTGCCGCTGTTCATTATTGGTATATGCGAGATTATTGGGCAACAGTAGGTGAATCTCCAACCTTCTTTAGATATGTAGACTGGGTACTTACAGTACCTTTAATGTGTGTTGAATTTTACCTTATACTAAAAGTTGCTGGCGCAAAAAAATCCCTTATGTGGAAACTTATTGCTGCATCTATTGTAATGCTTGTGACTGGATATTTTGGAGAAGCAGTATACAATACAGGTACTGGTCCAGCCGTTTGGGGTTTAATTTCAGGTCTTGCTTATTTC MAMMAASAFFFFSMNDFDTKWKTSILVSGLITFIAAVHYWYMRDYWATVGESPTFFRYVDWVLTVPLMCVEFYLILKVAGAKKSLMWKLIAASIVMLVTGYFGEAVYNTGTGPAVWGLISGLAYF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGCCATGATGGCTGCATCTGCCTTCTTTTTCTTTTCAATGAATGATTTTGACACTAAATGGAAAACCTCTATTCTGGTTTCTGGTCTTATTACATTTATTGCCGCTGTTCATTATTGGTATATGCGAGATTATTGGGCA---------------------------------------------------ACAGTAGGTGAATCTCCAACCTTCTTTAGATATGTAGACTGG------------------------GTACTTACAGTACCTTTAATGTGTGTTGAATTTTACCTTATACTAAAAGTT---------GCT------GGCGCAAAAAAA---TCCCTT------------------------------------ATGTGGAAA---CTTATTGCTGCATCTATTGTAATGCTTGTGACTGGATATTTTGGAGAA---------GCA------------------GTA------TACAAT------------------------------------------------------ACA---------GGT---------------------------ACTGGTCCA------------------GCCGTTTGG---GGTTTAATTTCAGGTCTTGCTTATTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------------------------------------------------MAMMAASAFFFFSMNDFDTKWKTSILVSGLITFIAAVHYWYMRDYWA-----------------TVGESPTFFRYVDW--------VLTVPLMCVEFYLILKV---A--GAKK-SL------------MWK-LIAASIVMLVTGYFGE---A------V--YN------------------T---G---------TGP------AVW-GLISGLAYF-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_EU224284 [II-CFB-Dokdonia] clone_1812216_EU224284 gi|164698740|gb|EU224284| Uncultured bacterium clone 1812216 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 1812216 putative proteorhodopsin gene, partial cds. EU224284 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2008 #na surface water sample Indian Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGCTGGCCGCTACTGTGTTCTTCTTTCTTTCTATGAATAGTTTTGACAGAAAGTGGAAAACTTCCATTCTTGTTTCAGGATTAATTACGTTCATTGCAGCAGTTCACTACTGGTACATGCGTGATTACTGGGCAGGAGTTGGTGAATCTCCTACCTTTTTCAGGTATGTAGACTGGACGCTTACTGTTCCATTGATGTGTGTTGAATTCTATCTTATTTTAAAGGTAGCTGGAGCACAAAAATCCCTAATGTGGAAACTAATTCTAGCTTCTGTAGTGATGTTAGTAACTGGTTACTTTGGTGAAGCAGTGTACACCACAGGAAGTGGACCAGCATTATGGGGTCTTATTTCTGGTATTGCGTACTTCTACATTGTGTACGAAATCTGGTTTGGTACAGCGAAAAAATTGGCTGAATCTGCTGGGGGAGCGGTACTAAAAGCACACAAAACATTATGCTGGTTTGTACTAGTAGGGTGGGCCATCTATCCA MLAATVFFFLSMNSFDRKWKTSILVSGLITFIAAVHYWYMRDYWAGVGESPTFFRYVDWTLTVPLMCVEFYLILKVAGAQKSLMWKLILASVVMLVTGYFGEAVYTTGSGPALWGLISGIAYFYIVYEIWFGTAKKLAESAGGAVLKAHKTLCWFVLVGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGTGTTCTTCTTTCTTTCTATGAATAGTTTTGACAGAAAGTGGAAAACTTCCATTCTTGTTTCAGGATTAATTACGTTCATTGCAGCAGTTCACTACTGGTACATGCGTGATTACTGGGCA---------------------------------------------------GGAGTTGGTGAATCTCCTACCTTTTTCAGGTATGTAGACTGG------------------------ACGCTTACTGTTCCATTGATGTGTGTTGAATTCTATCTTATTTTAAAGGTA---------GCT------GGAGCACAAAAA---TCCCTA------------------------------------ATGTGGAAA---CTAATTCTAGCTTCTGTAGTGATGTTAGTAACTGGTTACTTTGGTGAA---------GCA------------------GTG------TACACC------------------------------------------------------ACA---------GGA---------------------------AGTGGACCA------------------GCATTATGG---GGTCTTATTTCTGGTATTGCGTACTTCTACATTGTGTACGAAATC---------------TGG------TTT---GGTACAGCGAAAAAATTGGCTGAATCT------GCT---GGGGGAGCG---GTA---CTA---AAA---GCA---CAC---AAA---ACATTA---TGCTGGTTTGTACTAGTA---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFLSMNSFDRKWKTSILVSGLITFIAAVHYWYMRDYWA-----------------GVGESPTFFRYVDW--------TLTVPLMCVEFYLILKV---A--GAQK-SL------------MWK-LILASVVMLVTGYFGE---A------V--YT------------------T---G---------SGP------ALW-GLISGIAYFYIVYEI-----W--F-GTAKKLAES--A-GGA-V-L-K-A-H-K-TL-CWFVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_EU224287 [II-CFB-Dokdonia] clone_1812219_EU224287 gi|164698746|gb|EU224287| Uncultured bacterium clone 1812219 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 1812219 putative proteorhodopsin gene, partial cds. EU224287 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2008 #na surface water sample Indian Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGCTGGCCGCTACTGTGTTCTTCTTTCTTTCTATGAATAGTTTTGACAGAAAGTGGAAAACTTCCATTCTTGTTTCAGGATTAATTACGTTCATTGCAGCAGTTCACTACTGGTACATGCGTGATTACTGGGCAGGAGTTGGTGAATCTCCTACCTTTTTCAGGTATGTAGACTGGACGCTTACTGTTCCATTGATGTGTGTTGAATTCTATCTTATTTTAAAGGTAGCTGGAGCACAAAAATCCCTAATGTGGAAACTAATTCTAGCTTCTGTAGTGATGTTAGTAACTGGTTACTTTGGTGAAGCAGTGTACACCACAGGAAGTGGACCAGCATTATGGGGTCTTATTTCTGGTATTGCGTACTTCTACATTGTGTACGAAATCTGGTTTGGTACAGCGAAAAAATTGGCTGAATCTGCTGGGGGAGCGGTACTAAAAGCACACAAAACATTATGCTGGTTTGTACTAGTAGGGTGGGCCATCTATCCA MLAATVFFFLSMNSFDRKWKTSILVSGLITFIAAVHYWYMRDYWAGVGESPTFFRYVDWTLTVPLMCVEFYLILKVAGAQKSLMWKLILASVVMLVTGYFGEAVYTTGSGPALWGLISGIAYFYIVYEIWFGTAKKLAESAGGAVLKAHKTLCWFVLVGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGTGTTCTTCTTTCTTTCTATGAATAGTTTTGACAGAAAGTGGAAAACTTCCATTCTTGTTTCAGGATTAATTACGTTCATTGCAGCAGTTCACTACTGGTACATGCGTGATTACTGGGCA---------------------------------------------------GGAGTTGGTGAATCTCCTACCTTTTTCAGGTATGTAGACTGG------------------------ACGCTTACTGTTCCATTGATGTGTGTTGAATTCTATCTTATTTTAAAGGTA---------GCT------GGAGCACAAAAA---TCCCTA------------------------------------ATGTGGAAA---CTAATTCTAGCTTCTGTAGTGATGTTAGTAACTGGTTACTTTGGTGAA---------GCA------------------GTG------TACACC------------------------------------------------------ACA---------GGA---------------------------AGTGGACCA------------------GCATTATGG---GGTCTTATTTCTGGTATTGCGTACTTCTACATTGTGTACGAAATC---------------TGG------TTT---GGTACAGCGAAAAAATTGGCTGAATCT------GCT---GGGGGAGCG---GTA---CTA---AAA---GCA---CAC---AAA---ACATTA---TGCTGGTTTGTACTAGTA---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFLSMNSFDRKWKTSILVSGLITFIAAVHYWYMRDYWA-----------------GVGESPTFFRYVDW--------TLTVPLMCVEFYLILKV---A--GAQK-SL------------MWK-LILASVVMLVTGYFGE---A------V--YT------------------T---G---------SGP------ALW-GLISGIAYFYIVYEI-----W--F-GTAKKLAES--A-GGA-V-L-K-A-H-K-TL-CWFVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_FJ560772 [II-CFB-Dokdonia] HEL31_env_samples_FJ560772 gi|223868691|gb|FJ560772| Uncultured microorganism clone HEL31 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL31 putative proteorhodopsin gene, partial cds FJ560772 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTTCCATTAATGTGTGTTGAATTCTATCTTATACTCAAAGTTGCTGGTGCAACTAAAAGTCTTTTATGGAAACTAATCGGGCTTTCAGTCGTAATGCTTGTAACTGGGTATTTCGGAGAAACAATGGGCAACGCTGTAATGTGGGGTACTATTTCTGGACTTGCATATTTTGTAATTGTATACGAAATATGGCTTGGTGGAGCTGCTAAAATGGCTAAAGAAGCTGGAGGAGATGTTCTCCTAAAACGGGACAAAATTCTTTGCTGG TVPLMCVEFYLILKVAGATKSLLWKLIGLSVVMLVTGYFGETMGNAVMWGTISGLAYFVIVYEIWLGGAAKMAKEAGGDVLLKRDKILCW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTTCCATTAATGTGTGTTGAATTCTATCTTATACTCAAAGTT---------GCT------GGTGCAACTAAA---AGTCTT------------------------------------TTATGGAAA---CTAATCGGGCTTTCAGTCGTAATGCTTGTAACTGGGTATTTCGGAGAA---------ACA------------------ATG------------------------------------------------------------------------------------------------------------GGCAACGCT------------------GTAATGTGG---GGTACTATTTCTGGACTTGCATATTTTGTAATTGTATACGAAATA---------------TGG------CTT---GGTGGAGCTGCTAAAATGGCTAAAGAA------GCT---GGAGGAGAT---GTTCTCCTA---AAA---CGG---GAC---AAA---ATTCTT---TGCTGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLMCVEFYLILKV---A--GATK-SL------------LWK-LIGLSVVMLVTGYFGE---T------M------------------------------------GNA------VMW-GTISGLAYFVIVYEI-----W--L-GGAAKMAKE--A-GGD-VLL-K-R-D-K-IL-CW------------------------------------------------------------------------------------------------------------------------------------ [II-CFB-Dokdonia]_FJ560797 [II-CFB-Dokdonia] HEL69_env_samples_FJ560797 gi|223868741|gb|FJ560797| Uncultured microorganism clone HEL69 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL69 putative proteorhodopsin gene, partial cds FJ560797 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTTCCATTAATGTGTGTTGAATTCTATCTTATACTCAAAGTTGCTGGTGCAACTAAAAGTCTTTTATGGAAACTAATCGGGCTTTCAGTCGTAATGCTTGTAACTGGGTATTTCGGAGAAACAATGGGCAACGCTGTAATGTGGGGTACTATTTCTGGACTTGCATATTTTGTAATTGTATACGAAATATGGCTTGGTGGAGCTGCTAAAATGGCTAAAGAAGCTGGAGGAGATGTTCTACACGCGCACAAAATTCTTTGCTGG TVPLMCVEFYLILKVAGATKSLLWKLIGLSVVMLVTGYFGETMGNAVMWGTISGLAYFVIVYEIWLGGAAKMAKEAGGDVLHAHKILCW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTTCCATTAATGTGTGTTGAATTCTATCTTATACTCAAAGTT---------GCT------GGTGCAACTAAA---AGTCTT------------------------------------TTATGGAAA---CTAATCGGGCTTTCAGTCGTAATGCTTGTAACTGGGTATTTCGGAGAA---------ACA------------------ATG------------------------------------------------------------------------------------------------------------GGCAACGCT------------------GTAATGTGG---GGTACTATTTCTGGACTTGCATATTTTGTAATTGTATACGAAATA---------------TGG------CTT---GGTGGAGCTGCTAAAATGGCTAAAGAA------GCT---GGAGGAGAT---GTT---CTA---CAC---GCG---CAC---AAA---ATTCTT---TGCTGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLMCVEFYLILKV---A--GATK-SL------------LWK-LIGLSVVMLVTGYFGE---T------M------------------------------------GNA------VMW-GTISGLAYFVIVYEI-----W--L-GGAAKMAKE--A-GGD-V-L-H-A-H-K-IL-CW------------------------------------------------------------------------------------------------------------------------------------ [II-CFB-Dokdonia]_FJ560822 [II-CFB-Dokdonia] HEL102_env_samples_FJ560822 gi|223868791|gb|FJ560822| Uncultured microorganism clone HEL102 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL102 putative proteorhodopsin gene, partial cds FJ560822 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTACCATTAATGTGTGTTGAATTCTATTTGATTCTTAAGGTGGCTGGTGCTACAAAAGCATTACTTAATAAGATGATTTTATTATCTGTTATTATGCTTGTAACTGGTTACATTGGAGAATCTGGAGGAGACGCAGTAATCTGGGGTACTATTTCAGGTATTGCTTATTTCGTGATTGTTTATGAAATCTGGTTAGGTGGAGCAGCAAAATTAGCTAAAGAAGCTGGTGGAGATGTTTTACATGCTCACAAAATCCTTTGCTGG TVPLMCVEFYLILKVAGATKALLNKMILLSVIMLVTGYIGESGGDAVIWGTISGIAYFVIVYEIWLGGAAKLAKEAGGDVLHAHKILCW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTACCATTAATGTGTGTTGAATTCTATTTGATTCTTAAGGTG---------GCT------GGTGCTACAAAA---GCATTA------------------------------------CTTAATAAG---ATGATTTTATTATCTGTTATTATGCTTGTAACTGGTTACATTGGAGAA---------TCT---------------------------------------------------------------------------------------------------GGA---------------------------GGAGACGCA------------------GTAATCTGG---GGTACTATTTCAGGTATTGCTTATTTCGTGATTGTTTATGAAATC---------------TGG------TTA---GGTGGAGCAGCAAAATTAGCTAAAGAA------GCT---GGTGGAGAT---GTT---TTA---CAT---GCT---CAC---AAA---ATCCTT---TGCTGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLMCVEFYLILKV---A--GATK-AL------------LNK-MILLSVIMLVTGYIGE---S---------------------------------G---------GDA------VIW-GTISGIAYFVIVYEI-----W--L-GGAAKLAKE--A-GGD-V-L-H-A-H-K-IL-CW------------------------------------------------------------------------------------------------------------------------------------ [II-CFB-Dokdonia]_EU915733 [II-CFB-Dokdonia] APF9001_env_samples_EU915733 gi|229358348|gb|EU915733| Uncultured microorganism clone APF9001 putative proteorhodopsin gene, partial cds Uncultured microorganism clone APF9001 putative proteorhodopsin gene, partial cds EU915733 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample_at_75_m_depth Atlantic Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTTGCCGCTACCGTGTTCTTCTTTTTGTCAATGAACAATTTTGACCGTAAATGGAGAACTTCCATTTTAGTATCAGGATTGATTACGTTCATTGCTGCAGTGCACTATTGGTACATGCGTGATTATTGGGCAGCCAATGGTGAATCGCCCACCTTTTTCCGTTATGTGGACTGGATTCTGACAGTTCCCCTAATGTGCGTTGAGTTTTATTTGATCCTAAAAGTAGCTGGTGCCAAGAAAGCGTTGATGTGGAAATTGATCGCGCTATCCGTAATCATGCTGGTTACAGGTTACCTAGGAGAGACCGTTTACCGTGACCAAGCACAGATTTGGGGTCTTATTTCCGGTATCGCTTACTTTGTCATCGTTTATGAGATTTGGCTGGGAGGCGCCAACAAATTGGCAAGAGAAGCTGGAGGCGCTGTACTTTCCGCCCACAGAACACTATGCTGGTTCGTATTGGTAGGGTGGGCTATCTAT MVAATVFFFLSMNNFDRKWRTSILVSGLITFIAAVHYWYMRDYWAANGESPTFFRYVDWILTVPLMCVEFYLILKVAGAKKALMWKLIALSVIMLVTGYLGETVYRDQAQIWGLISGIAYFVIVYEIWLGGANKLAREAGGAVLSAHRTLCWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACCGTGTTCTTCTTTTTGTCAATGAACAATTTTGACCGTAAATGGAGAACTTCCATTTTAGTATCAGGATTGATTACGTTCATTGCTGCAGTGCACTATTGGTACATGCGTGATTATTGGGCA---------------------------------------------------GCCAATGGTGAATCGCCCACCTTTTTCCGTTATGTGGACTGG------------------------ATTCTGACAGTTCCCCTAATGTGCGTTGAGTTTTATTTGATCCTAAAAGTA---------GCT------GGTGCCAAGAAA---GCGTTG------------------------------------ATGTGGAAA---TTGATCGCGCTATCCGTAATCATGCTGGTTACAGGTTACCTAGGAGAG---------ACC------------------GTT------TACCGT------------------------------------------------------------------------------------------------GACCAAGCA------------------CAGATTTGG---GGTCTTATTTCCGGTATCGCTTACTTTGTCATCGTTTATGAGATT---------------TGG------CTG---GGAGGCGCCAACAAATTGGCAAGAGAA------GCT---GGAGGCGCT---GTA---CTT---TCC---GCC---CAC---AGA---ACACTA---TGCTGGTTCGTATTGGTA---------------------------------------------------------------GGGTGG---------GCTATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLSMNNFDRKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------ANGESPTFFRYVDW--------ILTVPLMCVEFYLILKV---A--GAKK-AL------------MWK-LIALSVIMLVTGYLGE---T------V--YR--------------------------------DQA------QIW-GLISGIAYFVIVYEI-----W--L-GGANKLARE--A-GGA-V-L-S-A-H-R-TL-CWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_EF088526 [II-CFB-Dokdonia] clone_APF9001_EF088526 gi|126843269|gb|EF088526| Uncultured bacterium clone APF9001 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone APF9001 putative proteorhodopsin gene, partial cds. EF088526 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na 75m water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTTGCCGCTACCGTGTTCTTCTTTTTGTCAATGAACAATTTTGACCGTAAATGGAGAACTTCCATTTTAGTATCAGGATTGATTACGTTCATTGCTGCAGTGCACTATTGGTACATGCGTGATTATTGGGCAGCCAATGGTGAATCGCCCACCTTTTTCCGTTATGTGGACTGGATTCTGACAGTTCCCCTAATGTGCGTTGAGTTTTATTTGATCCTAAAAGTAGCTGGTGCCAAGAAAGCGTTGATGTGGAAATTGATCGCGCTATCCGTAATCATGCTGGTTACAGGTTACCTAGGAGAGACCGTTTACCGTGACCAAGCACAGATTTGGGGTCTTATTTCCGGTATCGCTTACTTTGTCATCGTTTATGAGATTTGGCTGGGAGGCGCCAACAAATTGGCAAGAGAAGCTGGAGGCGCTGTACTTTCCGCCCACAGAACACTATGCTGGTTCGTATTGGTAGGGTGGGCTATCTATCCA MVAATVFFFLSMNNFDRKWRTSILVSGLITFIAAVHYWYMRDYWAANGESPTFFRYVDWILTVPLMCVEFYLILKVAGAKKALMWKLIALSVIMLVTGYLGETVYRDQAQIWGLISGIAYFVIVYEIWLGGANKLAREAGGAVLSAHRTLCWFVLVGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACCGTGTTCTTCTTTTTGTCAATGAACAATTTTGACCGTAAATGGAGAACTTCCATTTTAGTATCAGGATTGATTACGTTCATTGCTGCAGTGCACTATTGGTACATGCGTGATTATTGGGCA---------------------------------------------------GCCAATGGTGAATCGCCCACCTTTTTCCGTTATGTGGACTGG------------------------ATTCTGACAGTTCCCCTAATGTGCGTTGAGTTTTATTTGATCCTAAAAGTA---------GCT------GGTGCCAAGAAA---GCGTTG------------------------------------ATGTGGAAA---TTGATCGCGCTATCCGTAATCATGCTGGTTACAGGTTACCTAGGAGAG---------ACC------------------GTT------TACCGT------------------------------------------------------------------------------------------------GACCAAGCA------------------CAGATTTGG---GGTCTTATTTCCGGTATCGCTTACTTTGTCATCGTTTATGAGATT---------------TGG------CTG---GGAGGCGCCAACAAATTGGCAAGAGAA------GCT---GGAGGCGCT---GTA---CTT---TCC---GCC---CAC---AGA---ACACTA---TGCTGGTTCGTATTGGTA---------------------------------------------------------------GGGTGG---------GCTATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLSMNNFDRKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------ANGESPTFFRYVDW--------ILTVPLMCVEFYLILKV---A--GAKK-AL------------MWK-LIALSVIMLVTGYLGE---T------V--YR--------------------------------DQA------QIW-GLISGIAYFVIVYEI-----W--L-GGANKLARE--A-GGA-V-L-S-A-H-R-TL-CWFVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_EU915737 [II-CFB-Dokdonia] APF9012_env_samples_EU915737 gi|229358356|gb|EU915737| Uncultured microorganism clone APF9012 putative proteorhodopsin gene, partial cds Uncultured microorganism clone APF9012 putative proteorhodopsin gene, partial cds EU915737 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample_at_75_m_depth Atlantic Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTTGCCGCTACTGTTTTCTTCTTTTTGTCAATGAACAATTTTGACCGTAAATGGAGAACTTCCATTTTAGTATCAGGATTGATTACGTTCATTGCTGCAGTGCACTATTGGTACATGCGTGATTATTGGGCAGCCAATGGTGAATCGCCCACCTTTTTCCGTTATGTGGACTGGATTCTGACAGTTCCCCTAATGTGCGTTGAGTTTTATTTGATCCTAAAAGTAGCTGGTGCCAAGAAAGCGTTGATGTGGAAATTGATCGCGCTATCCGTAATCATGCTGGTTACAGGTTACCTAGGAGAGACCGTTTACCGTGACCAAGCACAGATTTGGGGTCTTATTTCCGGTATCGCTTACTTTGTCATCGTTTATGAGATTTGGCTGGGAGGCGCCAACAAATTGGCAAGAGAAGCTGGAGGCGCTGTACTTTCCGCCCACAGAACACTATGCTGGTTCGTATTGGTAGGTTGGGCGATCTAC MVAATVFFFLSMNNFDRKWRTSILVSGLITFIAAVHYWYMRDYWAANGESPTFFRYVDWILTVPLMCVEFYLILKVAGAKKALMWKLIALSVIMLVTGYLGETVYRDQAQIWGLISGIAYFVIVYEIWLGGANKLAREAGGAVLSAHRTLCWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTTTTCTTCTTTTTGTCAATGAACAATTTTGACCGTAAATGGAGAACTTCCATTTTAGTATCAGGATTGATTACGTTCATTGCTGCAGTGCACTATTGGTACATGCGTGATTATTGGGCA---------------------------------------------------GCCAATGGTGAATCGCCCACCTTTTTCCGTTATGTGGACTGG------------------------ATTCTGACAGTTCCCCTAATGTGCGTTGAGTTTTATTTGATCCTAAAAGTA---------GCT------GGTGCCAAGAAA---GCGTTG------------------------------------ATGTGGAAA---TTGATCGCGCTATCCGTAATCATGCTGGTTACAGGTTACCTAGGAGAG---------ACC------------------GTT------TACCGT------------------------------------------------------------------------------------------------GACCAAGCA------------------CAGATTTGG---GGTCTTATTTCCGGTATCGCTTACTTTGTCATCGTTTATGAGATT---------------TGG------CTG---GGAGGCGCCAACAAATTGGCAAGAGAA------GCT---GGAGGCGCT---GTA---CTT---TCC---GCC---CAC---AGA---ACACTA---TGCTGGTTCGTATTGGTA---------------------------------------------------------------GGTTGG---------GCGATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLSMNNFDRKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------ANGESPTFFRYVDW--------ILTVPLMCVEFYLILKV---A--GAKK-AL------------MWK-LIALSVIMLVTGYLGE---T------V--YR--------------------------------DQA------QIW-GLISGIAYFVIVYEI-----W--L-GGANKLARE--A-GGA-V-L-S-A-H-R-TL-CWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_EF088530 [II-CFB-Dokdonia] clone_APF9012_EF088530 gi|126843277|gb|EF088530| Uncultured bacterium clone APF9012 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone APF9012 putative proteorhodopsin gene, partial cds. EF088530 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na 75m water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTTGCCGCTACTGTTTTCTTCTTTTTGTCAATGAACAATTTTGACCGTAAATGGAGAACTTCCATTTTAGTATCAGGATTGATTACGTTCATTGCTGCAGTGCACTATTGGTACATGCGTGATTATTGGGCAGCCAATGGTGAATCGCCCACCTTTTTCCGTTATGTGGACTGGATTCTGACAGTTCCCCTAATGTGCGTTGAGTTTTATTTGATCCTAAAAGTAGCTGGTGCCAAGAAAGCGTTGATGTGGAAATTGATCGCGCTATCCGTAATCATGCTGGTTACAGGTTACCTAGGAGAGACCGTTTACCGTGACCAAGCACAGATTTGGGGTCTTATTTCCGGTATCGCTTACTTTGTCATCGTTTATGAGATTTGGCTGGGAGGCGCCAACAAATTGGCAAGAGAAGCTGGAGGCGCTGTACTTTCCGCCCACAGAACACTATGCTGGTTCGTATTGGTAGGTTGGGCGATCTACCCA MVAATVFFFLSMNNFDRKWRTSILVSGLITFIAAVHYWYMRDYWAANGESPTFFRYVDWILTVPLMCVEFYLILKVAGAKKALMWKLIALSVIMLVTGYLGETVYRDQAQIWGLISGIAYFVIVYEIWLGGANKLAREAGGAVLSAHRTLCWFVLVGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTTTTCTTCTTTTTGTCAATGAACAATTTTGACCGTAAATGGAGAACTTCCATTTTAGTATCAGGATTGATTACGTTCATTGCTGCAGTGCACTATTGGTACATGCGTGATTATTGGGCA---------------------------------------------------GCCAATGGTGAATCGCCCACCTTTTTCCGTTATGTGGACTGG------------------------ATTCTGACAGTTCCCCTAATGTGCGTTGAGTTTTATTTGATCCTAAAAGTA---------GCT------GGTGCCAAGAAA---GCGTTG------------------------------------ATGTGGAAA---TTGATCGCGCTATCCGTAATCATGCTGGTTACAGGTTACCTAGGAGAG---------ACC------------------GTT------TACCGT------------------------------------------------------------------------------------------------GACCAAGCA------------------CAGATTTGG---GGTCTTATTTCCGGTATCGCTTACTTTGTCATCGTTTATGAGATT---------------TGG------CTG---GGAGGCGCCAACAAATTGGCAAGAGAA------GCT---GGAGGCGCT---GTA---CTT---TCC---GCC---CAC---AGA---ACACTA---TGCTGGTTCGTATTGGTA---------------------------------------------------------------GGTTGG---------GCGATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLSMNNFDRKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------ANGESPTFFRYVDW--------ILTVPLMCVEFYLILKV---A--GAKK-AL------------MWK-LIALSVIMLVTGYLGE---T------V--YR--------------------------------DQA------QIW-GLISGIAYFVIVYEI-----W--L-GGANKLARE--A-GGA-V-L-S-A-H-R-TL-CWFVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_EU915734 [II-CFB-Dokdonia] APF9004_env_samples_EU915734 gi|229358350|gb|EU915734| Uncultured microorganism clone APF9004 putative proteorhodopsin gene, partial cds Uncultured microorganism clone APF9004 putative proteorhodopsin gene, partial cds EU915734 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample_at_75_m_depth Atlantic Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGTGTTCTTCTTTTTGTCAATGAACAATTTTGACCGTAAATGGAGAACTTCCATTTTAGTATCAGGATTGATTACGTTCATTGCTGCAGTGCACTATTGGTACATGCGTGATTATTGGGCAGCCAATGGTGAATCGCCCACCTTTTTCCGTTATGTGGACTGGATTCTGACAGTTCCCCTAATGTGCGTTGAGTTTTATTTGATCCTAAAAGTAGCTGGTGCCAAGAAAGCGTTGATGTGGAAATTGATCGCGCTATCCGTAATCATGCTGGTTACAGGTTACCTAGGAGAGACCGTTTACCGTGACCAAGCACAGATTTGGGGTCTTATTTCCGGTATCGCTTACTTTGTCATCGTTTATGAGATTTGGCTGGGAGGCGCCAACAAATTGGCAAGAGAAGCTGGAGGCGCTGTACTTTCCGCCCACAGAACACTATGCTGGTTCGTATTGGTAGGTTGGGCCATCTAT MVAATVFFFLSMNNFDRKWRTSILVSGLITFIAAVHYWYMRDYWAANGESPTFFRYVDWILTVPLMCVEFYLILKVAGAKKALMWKLIALSVIMLVTGYLGETVYRDQAQIWGLISGIAYFVIVYEIWLGGANKLAREAGGAVLSAHRTLCWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTGTTCTTCTTTTTGTCAATGAACAATTTTGACCGTAAATGGAGAACTTCCATTTTAGTATCAGGATTGATTACGTTCATTGCTGCAGTGCACTATTGGTACATGCGTGATTATTGGGCA---------------------------------------------------GCCAATGGTGAATCGCCCACCTTTTTCCGTTATGTGGACTGG------------------------ATTCTGACAGTTCCCCTAATGTGCGTTGAGTTTTATTTGATCCTAAAAGTA---------GCT------GGTGCCAAGAAA---GCGTTG------------------------------------ATGTGGAAA---TTGATCGCGCTATCCGTAATCATGCTGGTTACAGGTTACCTAGGAGAG---------ACC------------------GTT------TACCGT------------------------------------------------------------------------------------------------GACCAAGCA------------------CAGATTTGG---GGTCTTATTTCCGGTATCGCTTACTTTGTCATCGTTTATGAGATT---------------TGG------CTG---GGAGGCGCCAACAAATTGGCAAGAGAA------GCT---GGAGGCGCT---GTA---CTT---TCC---GCC---CAC---AGA---ACACTA---TGCTGGTTCGTATTGGTA---------------------------------------------------------------GGTTGG---------GCCATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLSMNNFDRKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------ANGESPTFFRYVDW--------ILTVPLMCVEFYLILKV---A--GAKK-AL------------MWK-LIALSVIMLVTGYLGE---T------V--YR--------------------------------DQA------QIW-GLISGIAYFVIVYEI-----W--L-GGANKLARE--A-GGA-V-L-S-A-H-R-TL-CWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_EF088527 [II-CFB-Dokdonia] clone_APF9004_EF088527 gi|126843271|gb|EF088527| Uncultured bacterium clone APF9004 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone APF9004 putative proteorhodopsin gene, partial cds. EF088527 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na 75m water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTGGCCGCTACTGTGTTCTTCTTTTTGTCAATGAACAATTTTGACCGTAAATGGAGAACTTCCATTTTAGTATCAGGATTGATTACGTTCATTGCTGCAGTGCACTATTGGTACATGCGTGATTATTGGGCAGCCAATGGTGAATCGCCCACCTTTTTCCGTTATGTGGACTGGATTCTGACAGTTCCCCTAATGTGCGTTGAGTTTTATTTGATCCTAAAAGTAGCTGGTGCCAAGAAAGCGTTGATGTGGAAATTGATCGCGCTATCCGTAATCATGCTGGTTACAGGTTACCTAGGAGAGACCGTTTACCGTGACCAAGCACAGATTTGGGGTCTTATTTCCGGTATCGCTTACTTTGTCATCGTTTATGAGATTTGGCTGGGAGGCGCCAACAAATTGGCAAGAGAAGCTGGAGGCGCTGTACTTTCCGCCCACAGAACACTATGCTGGTTCGTATTGGTAGGTTGGGCCATCTATCCA MVAATVFFFLSMNNFDRKWRTSILVSGLITFIAAVHYWYMRDYWAANGESPTFFRYVDWILTVPLMCVEFYLILKVAGAKKALMWKLIALSVIMLVTGYLGETVYRDQAQIWGLISGIAYFVIVYEIWLGGANKLAREAGGAVLSAHRTLCWFVLVGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTGTTCTTCTTTTTGTCAATGAACAATTTTGACCGTAAATGGAGAACTTCCATTTTAGTATCAGGATTGATTACGTTCATTGCTGCAGTGCACTATTGGTACATGCGTGATTATTGGGCA---------------------------------------------------GCCAATGGTGAATCGCCCACCTTTTTCCGTTATGTGGACTGG------------------------ATTCTGACAGTTCCCCTAATGTGCGTTGAGTTTTATTTGATCCTAAAAGTA---------GCT------GGTGCCAAGAAA---GCGTTG------------------------------------ATGTGGAAA---TTGATCGCGCTATCCGTAATCATGCTGGTTACAGGTTACCTAGGAGAG---------ACC------------------GTT------TACCGT------------------------------------------------------------------------------------------------GACCAAGCA------------------CAGATTTGG---GGTCTTATTTCCGGTATCGCTTACTTTGTCATCGTTTATGAGATT---------------TGG------CTG---GGAGGCGCCAACAAATTGGCAAGAGAA------GCT---GGAGGCGCT---GTA---CTT---TCC---GCC---CAC---AGA---ACACTA---TGCTGGTTCGTATTGGTA---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLSMNNFDRKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------ANGESPTFFRYVDW--------ILTVPLMCVEFYLILKV---A--GAKK-AL------------MWK-LIALSVIMLVTGYLGE---T------V--YR--------------------------------DQA------QIW-GLISGIAYFVIVYEI-----W--L-GGANKLARE--A-GGA-V-L-S-A-H-R-TL-CWFVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_EU915727 [II-CFB-Dokdonia] APF9056_env_samples_EU915727 gi|229358336|gb|EU915727| Uncultured microorganism clone APF9056 putative proteorhodopsin gene, partial cds Uncultured microorganism clone APF9056 putative proteorhodopsin gene, partial cds EU915727 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample_at_75_m_depth Atlantic Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGATGGCCGCTACTGCATTCTTCTTTTTGTCAATGAACAATTTTGACCGTAAATGGAGAACTTCCATTTTAGTATCAGGATTGATTACGTTCATTGCTGCAGTGCACTATTGGTACATGCGTGATTATTGGGCAGCCAATGGTGAATCGCCCACCTTTTTCCGTTATGTGGACTGGATTCTGACAGTTCCCCTAATGTGCGTTGAGTTTTATTTGATCCTAAAAGTAGCTGGTGCCAAGAAAGCGTTGATGTGGAAATTGATCGCGCTATCCGTAATCATGCTGGTTACAGGTTACCTAGGAGAGACCGTTTACCGTGACCAAGCACAGATTTGGGGTCTTATTTCCGGTATCGCTTACTTTGTCATCGTTTATGAGATTTGGCTGGGAGGCGCCAACAAATTGGCAAGAGAAGCTGGAGGCGCTGTACTTTCCGCCCACAGAACACTATGCTGGTTCGTATTGGTAGGATGGGCCATCTAC MMAATAFFFLSMNNFDRKWRTSILVSGLITFIAAVHYWYMRDYWAANGESPTFFRYVDWILTVPLMCVEFYLILKVAGAKKALMWKLIALSVIMLVTGYLGETVYRDQAQIWGLISGIAYFVIVYEIWLGGANKLAREAGGAVLSAHRTLCWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGATGGCCGCTACTGCATTCTTCTTTTTGTCAATGAACAATTTTGACCGTAAATGGAGAACTTCCATTTTAGTATCAGGATTGATTACGTTCATTGCTGCAGTGCACTATTGGTACATGCGTGATTATTGGGCA---------------------------------------------------GCCAATGGTGAATCGCCCACCTTTTTCCGTTATGTGGACTGG------------------------ATTCTGACAGTTCCCCTAATGTGCGTTGAGTTTTATTTGATCCTAAAAGTA---------GCT------GGTGCCAAGAAA---GCGTTG------------------------------------ATGTGGAAA---TTGATCGCGCTATCCGTAATCATGCTGGTTACAGGTTACCTAGGAGAG---------ACC------------------GTT------TACCGT------------------------------------------------------------------------------------------------GACCAAGCA------------------CAGATTTGG---GGTCTTATTTCCGGTATCGCTTACTTTGTCATCGTTTATGAGATT---------------TGG------CTG---GGAGGCGCCAACAAATTGGCAAGAGAA------GCT---GGAGGCGCT---GTA---CTT---TCC---GCC---CAC---AGA---ACACTA---TGCTGGTTCGTATTGGTA---------------------------------------------------------------GGATGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MMAATAFFFLSMNNFDRKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------ANGESPTFFRYVDW--------ILTVPLMCVEFYLILKV---A--GAKK-AL------------MWK-LIALSVIMLVTGYLGE---T------V--YR--------------------------------DQA------QIW-GLISGIAYFVIVYEI-----W--L-GGANKLARE--A-GGA-V-L-S-A-H-R-TL-CWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_EF088520 [II-CFB-Dokdonia] clone_APF9056_EF088520 gi|126843257|gb|EF088520| Uncultured bacterium clone APF9056 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone APF9056 putative proteorhodopsin gene, partial cds. EF088520 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na 75m water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGATGGCCGCTACTGCATTCTTCTTTTTGTCAATGAACAATTTTGACCGTAAATGGAGAACTTCCATTTTAGTATCAGGATTGATTACGTTCATTGCTGCAGTGCACTATTGGTACATGCGTGATTATTGGGCAGCCAATGGTGAATCGCCCACCTTTTTCCGTTATGTGGACTGGATTCTGACAGTTCCCCTAATGTGCGTTGAGTTTTATTTGATCCTAAAAGTAGCTGGTGCCAAGAAAGCGTTGATGTGGAAATTGATCGCGCTATCCGTAATCATGCTGGTTACAGGTTACCTAGGAGAGACCGTTTACCGTGACCAAGCACAGATTTGGGGTCTTATTTCCGGTATCGCTTACTTTGTCATCGTTTATGAGATTTGGCTGGGAGGCGCCAACAAATTGGCAAGAGAAGCTGGAGGCGCTGTACTTTCCGCCCACAGAACACTATGCTGGTTCGTATTGGTAGGATGGGCCATCTACCCA MMAATAFFFLSMNNFDRKWRTSILVSGLITFIAAVHYWYMRDYWAANGESPTFFRYVDWILTVPLMCVEFYLILKVAGAKKALMWKLIALSVIMLVTGYLGETVYRDQAQIWGLISGIAYFVIVYEIWLGGANKLAREAGGAVLSAHRTLCWFVLVGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGATGGCCGCTACTGCATTCTTCTTTTTGTCAATGAACAATTTTGACCGTAAATGGAGAACTTCCATTTTAGTATCAGGATTGATTACGTTCATTGCTGCAGTGCACTATTGGTACATGCGTGATTATTGGGCA---------------------------------------------------GCCAATGGTGAATCGCCCACCTTTTTCCGTTATGTGGACTGG------------------------ATTCTGACAGTTCCCCTAATGTGCGTTGAGTTTTATTTGATCCTAAAAGTA---------GCT------GGTGCCAAGAAA---GCGTTG------------------------------------ATGTGGAAA---TTGATCGCGCTATCCGTAATCATGCTGGTTACAGGTTACCTAGGAGAG---------ACC------------------GTT------TACCGT------------------------------------------------------------------------------------------------GACCAAGCA------------------CAGATTTGG---GGTCTTATTTCCGGTATCGCTTACTTTGTCATCGTTTATGAGATT---------------TGG------CTG---GGAGGCGCCAACAAATTGGCAAGAGAA------GCT---GGAGGCGCT---GTA---CTT---TCC---GCC---CAC---AGA---ACACTA---TGCTGGTTCGTATTGGTA---------------------------------------------------------------GGATGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------MMAATAFFFLSMNNFDRKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------ANGESPTFFRYVDW--------ILTVPLMCVEFYLILKV---A--GAKK-AL------------MWK-LIALSVIMLVTGYLGE---T------V--YR--------------------------------DQA------QIW-GLISGIAYFVIVYEI-----W--L-GGANKLARE--A-GGA-V-L-S-A-H-R-TL-CWFVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_AB557564 [II-CFB-Dokdonia] SC22_Gilvibacter_AB557564 gi|376317462|gb|AB557564| Gilvibacter sp SC22 PR gene for proteorhodopsin, partial cds Gilvibacter sp SC22 PR gene for proteorhodopsin, partial cds AB557564 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Gilvibacter] taxon:754431 genomic_DNA strain 03MAY2012 #na seawater Pacific Ocean marine 35 139.3333 Diversity and functional analysis of proteorhodopsin in marine Flavobacteria Yoshizawa,S., Kawanabe,A., Ito,H., Kandori,H. and Kogure,K. Environ. Microbiol. 14 (5), 12401248 (2012) 22329552 #na TTCTTTTTGTCTATGAACAGTTTTGACCGCAAATGGAGAACATCGATTCTCGTTTCTGGACTCATCACGTTCATAGCTGCAGTACACTATTGGTACATGCGCGATTATTGGGCAACCAATATGGAATCGCCAACCTTCTTCCGTTATGTGGATTGGATTCTTACCGTTCCACTAATGTGTGTGGAGTTCTACTTGATCCTCAAAGTGGCCGGAGCCAAAAAATCACTCATGTGGAAGCTTATCTTGCTTTCCGTAGTGATGTTGGTAACAGGATACTGGGGAGAAGGTGTGGACAGAGACAATGCCTGGTTATGGGGTCTTATCTCTGGTATCGCTTACTTCGTTATTGTTTACGAGATCTGGCTCGGTGGTGCTGCAAAGCTCGCCAAGCAGGCTGGTGGTTCAGTAGCGAGCTCACACAAGATC FFLSMNSFDRKWRTSILVSGLITFIAAVHYWYMRDYWATNMESPTFFRYVDWILTVPLMCVEFYLILKVAGAKKSLMWKLILLSVVMLVTGYWGEGVDRDNAWLWGLISGIAYFVIVYEIWLGGAAKLAKQAGGSVASSHKI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTTTGTCTATGAACAGTTTTGACCGCAAATGGAGAACATCGATTCTCGTTTCTGGACTCATCACGTTCATAGCTGCAGTACACTATTGGTACATGCGCGATTATTGGGCA---------------------------------------------------ACCAATATGGAATCGCCAACCTTCTTCCGTTATGTGGATTGG------------------------ATTCTTACCGTTCCACTAATGTGTGTGGAGTTCTACTTGATCCTCAAAGTG---------GCC------GGAGCCAAAAAA---TCACTC------------------------------------ATGTGGAAG---CTTATCTTGCTTTCCGTAGTGATGTTGGTAACAGGATACTGGGGAGAA---------GGT------------------GTG------GACAGA------------------------------------------------------------------------------------------------GACAATGCC------------------TGGTTATGG---GGTCTTATCTCTGGTATCGCTTACTTCGTTATTGTTTACGAGATC---------------TGG------CTC---GGTGGTGCTGCAAAGCTCGCCAAGCAG------GCT---GGTGGTTCA---GTA---GCG---AGC---TCA---CAC---AAG---ATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------FFLSMNSFDRKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------TNMESPTFFRYVDW--------ILTVPLMCVEFYLILKV---A--GAKK-SL------------MWK-LILLSVVMLVTGYWGE---G------V--DR--------------------------------DNA------WLW-GLISGIAYFVIVYEI-----W--L-GGAAKLAKQ--A-GGS-V-A-S-S-H-K-I---------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_AB557573 [II-CFB-Dokdonia] SZ19_Gilvibacter_AB557573 gi|376317480|gb|AB557573| Gilvibacter sp SZ19 PR gene for proteorhodopsin, partial cds Gilvibacter sp SZ19 PR gene for proteorhodopsin, partial cds AB557573 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Gilvibacter] taxon:754429 genomic_DNA strain 03MAY2012 #na seawater Pacific Ocean marine 35 139.3333 Diversity and functional analysis of proteorhodopsin in marine Flavobacteria Yoshizawa,S., Kawanabe,A., Ito,H., Kandori,H. and Kogure,K. Environ. Microbiol. 14 (5), 12401248 (2012) 22329552 #na TTCTTTTTGTCTATGAACAGTTTTGACCGCAAATGGAGAACATCGATTCTCGTTTCTGGACTCATCACGTTCATAGCTGCAGTACACTATTGGTACATGCGCGATTATTGGGCAACCAATATGGAATCGCCAACCTTCTTCCGTTATGTGGATTGGATTCTTACCGTTCCACTAATGTGTGTGGAGTTCTACTTGATCCTCAAAGTGGCCGGAGCCAAAAAATCACTCATGTGGAAGCTTATCTTGCTTTCCGTAGTGATGTTGGTAACAGGATACTGGGGAGAAGGTGTGGACAGAGACAATGCCTGGTTATGGGGTCTTATCTCTGGTATCGCTTACTTCGTTATTGTTTACGAGATCTGGCTCGGTGGTGCTGCAAAGCTCGCCAAGCAGGCTGGTGGTTCAGTAGCGAGCTCACACAAGATC FFLSMNSFDRKWRTSILVSGLITFIAAVHYWYMRDYWATNMESPTFFRYVDWILTVPLMCVEFYLILKVAGAKKSLMWKLILLSVVMLVTGYWGEGVDRDNAWLWGLISGIAYFVIVYEIWLGGAAKLAKQAGGSVASSHKI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTTTGTCTATGAACAGTTTTGACCGCAAATGGAGAACATCGATTCTCGTTTCTGGACTCATCACGTTCATAGCTGCAGTACACTATTGGTACATGCGCGATTATTGGGCA---------------------------------------------------ACCAATATGGAATCGCCAACCTTCTTCCGTTATGTGGATTGG------------------------ATTCTTACCGTTCCACTAATGTGTGTGGAGTTCTACTTGATCCTCAAAGTG---------GCC------GGAGCCAAAAAA---TCACTC------------------------------------ATGTGGAAG---CTTATCTTGCTTTCCGTAGTGATGTTGGTAACAGGATACTGGGGAGAA---------GGT------------------GTG------GACAGA------------------------------------------------------------------------------------------------GACAATGCC------------------TGGTTATGG---GGTCTTATCTCTGGTATCGCTTACTTCGTTATTGTTTACGAGATC---------------TGG------CTC---GGTGGTGCTGCAAAGCTCGCCAAGCAG------GCT---GGTGGTTCA---GTA---GCG---AGC---TCA---CAC---AAG---ATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------FFLSMNSFDRKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------TNMESPTFFRYVDW--------ILTVPLMCVEFYLILKV---A--GAKK-SL------------MWK-LILLSVVMLVTGYWGE---G------V--DR--------------------------------DNA------WLW-GLISGIAYFVIVYEI-----W--L-GGAAKLAKQ--A-GGS-V-A-S-S-H-K-I---------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_AB557563 [II-CFB-Dokdonia] SC19_Gilvibacter_AB557563 gi|376317460|gb|AB557563| Gilvibacter sp SC19 PR gene for proteorhodopsin, partial cds Gilvibacter sp SC19 PR gene for proteorhodopsin, partial cds AB557563 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Gilvibacter] taxon:754430 genomic_DNA strain 03MAY2012 #na seawater Pacific Ocean marine 35 139.3333 Diversity and functional analysis of proteorhodopsin in marine Flavobacteria Yoshizawa,S., Kawanabe,A., Ito,H., Kandori,H. and Kogure,K. Environ. Microbiol. 14 (5), 12401248 (2012) 22329552 #na TTCTTTTTGTCTATGAACAGTTTTGACCGCAAATGGAGAACATCGATTCTCGTTTCTGGACTCATCACGTTCATAGCTGCAGTACACTATTGGTACATGCGCGATTATTGGGCAACCAATATGGAATCGCCAACCTTCTTCCGTTATGTGGATTGGATTCTTACCGTTCCACTAATGTGTGTGGAGTTCTACTTGATCCTCAAAGTGGCCGGAGCCAAAAAATCACTCATGTGGAAGCTTATCTTGCTTTCCGTAGTGATGTTGGTAACAGGATACTGGGGAGAAGGTGTGGACAGAGACAATGCCTGGTTATGGGGTCTTATCTCTGGTATCGCTTACTTCGTTATTGTTTACGAGATCTGGCTCGGTGGTGCTGCAAAGCTCGCCAAGCAGGCTGGTGGTTCAGTAGCGAGCTCACACAAGATC FFLSMNSFDRKWRTSILVSGLITFIAAVHYWYMRDYWATNMESPTFFRYVDWILTVPLMCVEFYLILKVAGAKKSLMWKLILLSVVMLVTGYWGEGVDRDNAWLWGLISGIAYFVIVYEIWLGGAAKLAKQAGGSVASSHKI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTTTGTCTATGAACAGTTTTGACCGCAAATGGAGAACATCGATTCTCGTTTCTGGACTCATCACGTTCATAGCTGCAGTACACTATTGGTACATGCGCGATTATTGGGCA---------------------------------------------------ACCAATATGGAATCGCCAACCTTCTTCCGTTATGTGGATTGG------------------------ATTCTTACCGTTCCACTAATGTGTGTGGAGTTCTACTTGATCCTCAAAGTG---------GCC------GGAGCCAAAAAA---TCACTC------------------------------------ATGTGGAAG---CTTATCTTGCTTTCCGTAGTGATGTTGGTAACAGGATACTGGGGAGAA---------GGT------------------GTG------GACAGA------------------------------------------------------------------------------------------------GACAATGCC------------------TGGTTATGG---GGTCTTATCTCTGGTATCGCTTACTTCGTTATTGTTTACGAGATC---------------TGG------CTC---GGTGGTGCTGCAAAGCTCGCCAAGCAG------GCT---GGTGGTTCA---GTA---GCG---AGC---TCA---CAC---AAG---ATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------FFLSMNSFDRKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------TNMESPTFFRYVDW--------ILTVPLMCVEFYLILKV---A--GAKK-SL------------MWK-LILLSVVMLVTGYWGE---G------V--DR--------------------------------DNA------WLW-GLISGIAYFVIVYEI-----W--L-GGAAKLAKQ--A-GGS-V-A-S-S-H-K-I---------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_AB557569 [II-CFB-Dokdonia] SG18_Aureicoccus_AB557569 gi|376317472|gb|AB557569| Flavobacteria bacterium SG18 PR gene for proteorhodopsin, partial cds Flavobacteria bacterium SG18 PR gene for proteorhodopsin, partial cds AB557569 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Aureicoccus] taxon:754435 genomic_DNA strain 03MAY2012 #na seawater Pacific Ocean marine 35 139.3333 Diversity and functional analysis of proteorhodopsin in marine Flavobacteria Yoshizawa,S., Kawanabe,A., Ito,H., Kandori,H. and Kogure,K. Environ. Microbiol. 14 (5), 12401248 (2012) 22329552 #na TGCATGGCGATGATGGCCGCCTCGGCTTTCTTCTTTTTATCCATGAACACCTTTGATCGAAAATGGAAGACTTCGGTTTTGGTATCCGGATTGATCACGTTCATTGCTGCTGTACACTACTGGTATATGCGTGACTACTGGGCTGCAAACATGGAGTCACCGACCTTTTTCCGCTACGTGGACTGGGTACTCACCGTTCCGTTAATGTGTGTGGAGTTTTACTTAATTCTCAAAGTGGCTGGAGCCAAGAGATCCCTTATGTGGAACATGATTTGGTTATCCGTTATCATGCTCGTTACCGGATACTTTGGTGAGACCTTGTACCGAGATCAAGCTTGGTTCTGGGGATTAATTTCAGGTATTGCTTACTTCATCATAGTAGCGATCATCTGGGTTGGCCCTGCCAAAAAACTGGCCGTCCAAGCGGGTGGAGAAGTACTAAAAGCACACAAAACT CMAMMAASAFFFLSMNTFDRKWKTSVLVSGLITFIAAVHYWYMRDYWAANMESPTFFRYVDWVLTVPLMCVEFYLILKVAGAKRSLMWNMIWLSVIMLVTGYFGETLYRDQAWFWGLISGIAYFIIVAIIWVGPAKKLAVQAGGEVLKAHKT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCATGGCGATGATGGCCGCCTCGGCTTTCTTCTTTTTATCCATGAACACCTTTGATCGAAAATGGAAGACTTCGGTTTTGGTATCCGGATTGATCACGTTCATTGCTGCTGTACACTACTGGTATATGCGTGACTACTGGGCT---------------------------------------------------GCAAACATGGAGTCACCGACCTTTTTCCGCTACGTGGACTGG------------------------GTACTCACCGTTCCGTTAATGTGTGTGGAGTTTTACTTAATTCTCAAAGTG---------GCT------GGAGCCAAGAGA---TCCCTT------------------------------------ATGTGGAAC---ATGATTTGGTTATCCGTTATCATGCTCGTTACCGGATACTTTGGTGAG---------ACC------------------TTG------TACCGA------------------------------------------------------------------------------------------------GATCAAGCT------------------TGGTTCTGG---GGATTAATTTCAGGTATTGCTTACTTCATCATAGTAGCGATCATC---------------TGG------GTT---GGCCCTGCCAAAAAACTGGCCGTCCAA------GCG---GGTGGAGAA---GTA---CTA---AAA---GCA---CAC---AAA---ACT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------CMAMMAASAFFFLSMNTFDRKWKTSVLVSGLITFIAAVHYWYMRDYWA-----------------ANMESPTFFRYVDW--------VLTVPLMCVEFYLILKV---A--GAKR-SL------------MWN-MIWLSVIMLVTGYFGE---T------L--YR--------------------------------DQA------WFW-GLISGIAYFIIVAII-----W--V-GPAKKLAVQ--A-GGE-V-L-K-A-H-K-T---------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_JX863314 [II-CFB-Dokdonia] MALINA_OTU44_168_M_env_samples_JX863314 gi|425477578|gb|JX863314| Uncultured bacterium clone MALINA OTU44 168 M putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU44 168 M putative proteorhodopsin mRNA, partial cds JX863314 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 08Aug2009 3m_depth Arctic Ocean marine 70.8 -133.73 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGGTACTTACGGTGCCGTTGATGTGTGTGGAGTTTTATGTAATTCTGAAAGTTGCAGGAGCTAAGAAGTCCCTTTTGTGGAGACTTATTATTCTTTCTGTAGTGATGTTAGTTACAGGTTATCTAGGTGAAGCGGTAGATCGCGACAACGCATGGTTGTGGGGTTTACTTTCAGGTGCAGCTTACTTTGTAATTGTTTACGACATCTGGTTCGGTCAAGCTAAGAAATTAGCCGTAGCAGCTGGCGGAGACGTACTCGCAGCTCACAAAACACTTTGCTGGTTTGTACTTGTA WVLTVPLMCVEFYVILKVAGAKKSLLWRLIILSVVMLVTGYLGEAVDRDNAWLWGLLSGAAYFVIVYDIWFGQAKKLAVAAGGDVLAAHKTLCWFVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------GTACTTACGGTGCCGTTGATGTGTGTGGAGTTTTATGTAATTCTGAAAGTT---------GCA------GGAGCTAAGAAG---TCCCTT------------------------------------TTGTGGAGA---CTTATTATTCTTTCTGTAGTGATGTTAGTTACAGGTTATCTAGGTGAA---------GCG------------------GTA------GATCGC------------------------------------------------------------------------------------------------GACAACGCA------------------TGGTTGTGG---GGTTTACTTTCAGGTGCAGCTTACTTTGTAATTGTTTACGACATC---------------TGG------TTC---GGTCAAGCTAAGAAATTAGCCGTAGCA------GCT---GGCGGAGAC---GTA---CTC---GCA---GCT---CAC---AAA---ACACTT---TGCTGGTTTGTACTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------VLTVPLMCVEFYVILKV---A--GAKK-SL------------LWR-LIILSVVMLVTGYLGE---A------V--DR--------------------------------DNA------WLW-GLLSGAAYFVIVYDI-----W--F-GQAKKLAVA--A-GGD-V-L-A-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_JX863315 [II-CFB-Dokdonia] MALINA_OTU44_195_M_env_samples_JX863315 gi|425477580|gb|JX863315| Uncultured bacterium clone MALINA OTU44 195 M putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU44 195 M putative proteorhodopsin mRNA, partial cds JX863315 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 08Aug2009 3m_depth Arctic Ocean marine 70.8 -133.73 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGGTACTTACGGTGCCGTTGATGTGTGTGGAGTTTTATTTAATTCTGAAAGTTGCAGGAGCTAAGAAGTCCCTTTTGTGGAGACTTATTATTCTTTCTGTAGTGATGTTAGTTACAGGTTATCTAGGTGAAGCGGTAGATCGCGACAACGCATGGTTGTGGGGTTTACTTTCAGGTGCAGCTTACTTTGTAATTGTTTACGACATCTGGTTCGGTCAAGCTAAGAAATTAGCTGTAGCAGCTGGCGGAGACGTACTTGCAGCTCACAAAACACTTTGCTGGTTTGTACTTGTA WVLTVPLMCVEFYLILKVAGAKKSLLWRLIILSVVMLVTGYLGEAVDRDNAWLWGLLSGAAYFVIVYDIWFGQAKKLAVAAGGDVLAAHKTLCWFVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------GTACTTACGGTGCCGTTGATGTGTGTGGAGTTTTATTTAATTCTGAAAGTT---------GCA------GGAGCTAAGAAG---TCCCTT------------------------------------TTGTGGAGA---CTTATTATTCTTTCTGTAGTGATGTTAGTTACAGGTTATCTAGGTGAA---------GCG------------------GTA------GATCGC------------------------------------------------------------------------------------------------GACAACGCA------------------TGGTTGTGG---GGTTTACTTTCAGGTGCAGCTTACTTTGTAATTGTTTACGACATC---------------TGG------TTC---GGTCAAGCTAAGAAATTAGCTGTAGCA------GCT---GGCGGAGAC---GTA---CTT---GCA---GCT---CAC---AAA---ACACTT---TGCTGGTTTGTACTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------VLTVPLMCVEFYLILKV---A--GAKK-SL------------LWR-LIILSVVMLVTGYLGE---A------V--DR--------------------------------DNA------WLW-GLLSGAAYFVIVYDI-----W--F-GQAKKLAVA--A-GGD-V-L-A-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_JX863316 [II-CFB-Dokdonia] MALINA_OTU44_175_M_env_samples_JX863316 gi|425477582|gb|JX863316| Uncultured bacterium clone MALINA OTU44 175 M putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU44 175 M putative proteorhodopsin mRNA, partial cds JX863316 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 08Aug2009 3m_depth Arctic Ocean marine 70.8 -133.73 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGGTACCTACGGTGCCGTTGATGTGTGTGGAGTTTTATTTAATTCTGAAAGTTGCAGGAGCTAAGAAGTCCCTTTTGTGGAGACTTATTATTCTTTCTGTAGTGATGTTAGTTACAGGTTATCTAGGTGAAGCGGTAGATCGCGACAACGCATGGTTGTGGGGTTTACTTTCAGGTGCAGCTTACTTTGTAATTGTTTACGACATCTGGTTCGGTCAAGCTAAGAAATTAGCTGTAGCAGCTGGCGGAGACGTACTTGCAGCTCACAAAACACTTTGCTGGTTTGTACTTGTA WVPTVPLMCVEFYLILKVAGAKKSLLWRLIILSVVMLVTGYLGEAVDRDNAWLWGLLSGAAYFVIVYDIWFGQAKKLAVAAGGDVLAAHKTLCWFVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------GTACCTACGGTGCCGTTGATGTGTGTGGAGTTTTATTTAATTCTGAAAGTT---------GCA------GGAGCTAAGAAG---TCCCTT------------------------------------TTGTGGAGA---CTTATTATTCTTTCTGTAGTGATGTTAGTTACAGGTTATCTAGGTGAA---------GCG------------------GTA------GATCGC------------------------------------------------------------------------------------------------GACAACGCA------------------TGGTTGTGG---GGTTTACTTTCAGGTGCAGCTTACTTTGTAATTGTTTACGACATC---------------TGG------TTC---GGTCAAGCTAAGAAATTAGCTGTAGCA------GCT---GGCGGAGAC---GTA---CTT---GCA---GCT---CAC---AAA---ACACTT---TGCTGGTTTGTACTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------VPTVPLMCVEFYLILKV---A--GAKK-SL------------LWR-LIILSVVMLVTGYLGE---A------V--DR--------------------------------DNA------WLW-GLLSGAAYFVIVYDI-----W--F-GQAKKLAVA--A-GGD-V-L-A-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_JX312345 [II-CFB-Dokdonia] Krokinobacter_sp_DIK-SEA-51_JX312345 gi|404428497|gb|JX312345| Krokinobacter sp. DIK-SEA-51 proteorhodpsin (PR) gene, partial cds. Krokinobacter sp. DIK-SEA-51 proteorhodpsin (PR) gene, partial cds. JX312345 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Krokinobacter] taxon:1221363 genomic DNA strain 30-sept-13 #na #na #na #na #na Phylogenetic characterization of culturable proteorhodopsin-bearing flavobacteria in marine sediments Li,N. and Kim,J.S. Unpublished #na #na ATGAACAGCTTTGACCGTAAATGGAGAACATCCATTCTAGTGTCGGGCTTGATTACATTTATTGCCGCCGTCCATTATTGGTATATGCGCGATTACTGGCAAGCAAATGCTGAGTCACCTACATTTTTTAGGTATGTAGACTGGGTTCTTACAGTACCACTTATGTGTGTTGAGTTTTTCCTAATACTAAAAGTTGCAGGGGCTAAAAAGTCACTTATGTGGAGACTTATTTTCTTATCTGTGGTAATGCTAGTAACCGGATACATAGGTGAGGCTGTAGACAGAGATAATGCGTGGCTATGGGGATTAATCTCTGGAGCGGCTTACTTTGTAATTGTTTATGACATCTGGCTAGGAAGCGCAAAAAAGCTTGCT MNSFDRKWRTSILVSGLITFIAAVHYWYMRDYWQANAESPTFFRYVDWVLTVPLMCVEFFLILKVAGAKKSLMWRLIFLSVVMLVTGYIGEAVDRDNAWLWGLISGAAYFVIVYDIWLGSAKKLA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAACAGCTTTGACCGTAAATGGAGAACATCCATTCTAGTGTCGGGCTTGATTACATTTATTGCCGCCGTCCATTATTGGTATATGCGCGATTACTGGCAA---------------------------------------------------GCAAATGCTGAGTCACCTACATTTTTTAGGTATGTAGACTGG------------------------GTTCTTACAGTACCACTTATGTGTGTTGAGTTTTTCCTAATACTAAAAGTT---------GCA------GGGGCTAAAAAG---TCACTT------------------------------------ATGTGGAGA---CTTATTTTCTTATCTGTGGTAATGCTAGTAACCGGATACATAGGTGAG---------GCT------------------GTA------GACAGA------------------------------------------------------------------------------------------------GATAATGCG------------------TGGCTATGG---GGATTAATCTCTGGAGCGGCTTACTTTGTAATTGTTTATGACATC---------------TGG------CTA---GGAAGCGCAAAAAAGCTTGCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------MNSFDRKWRTSILVSGLITFIAAVHYWYMRDYWQ-----------------ANAESPTFFRYVDW--------VLTVPLMCVEFFLILKV---A--GAKK-SL------------MWR-LIFLSVVMLVTGYIGE---A------V--DR--------------------------------DNA------WLW-GLISGAAYFVIVYDI-----W--L-GSAKKLA--------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_JX312346 [II-CFB-Dokdonia] Krokinobacter_sp_TIK-SPO-166_JX312346 gi|404428499|gb|JX312346| Krokinobacter sp. TIK-SPO-166 proteorhodpsin (PR) gene, partial cds. Krokinobacter sp. TIK-SPO-166 proteorhodpsin (PR) gene, partial cds. JX312346 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Krokinobacter] taxon:1221364 genomic DNA strain 30-sept-13 #na #na #na #na #na Phylogenetic characterization of culturable proteorhodopsin-bearing flavobacteria in marine sediments Li,N. and Kim,J.S. Unpublished #na #na ATGAACAGCTTTGACCGTAAATGGAGAACATCCATTCTAGTGTCGGGCTTGATTACATTTATTGCCGCCGTCCATTATTGGTATATGCGCGATTACTGGCAAGCAAATGCTGAGTCACCTACATTTTTTAGGTATGTAGACTGGGTTCTTACAGTACCACTTATGTGTGTTGAGTTTTTCCTAATACTAAAAGTTGCAGGGGCTAAAAAGTCACTTATGTGGAGACTTATTTTCTTATCTGTGGTAATGCTAGTAACCGGATACATAGGTGAGGCTGTAGACAGAGATAATGCGTGGCTATGGGGATTAATCTCTGGAGCGGCTTACTTTGTAATTGTTTATGACATCTGGCTAGGAAGCGCAAAAAAGCTT MNSFDRKWRTSILVSGLITFIAAVHYWYMRDYWQANAESPTFFRYVDWVLTVPLMCVEFFLILKVAGAKKSLMWRLIFLSVVMLVTGYIGEAVDRDNAWLWGLISGAAYFVIVYDIWLGSAKKL ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAACAGCTTTGACCGTAAATGGAGAACATCCATTCTAGTGTCGGGCTTGATTACATTTATTGCCGCCGTCCATTATTGGTATATGCGCGATTACTGGCAA---------------------------------------------------GCAAATGCTGAGTCACCTACATTTTTTAGGTATGTAGACTGG------------------------GTTCTTACAGTACCACTTATGTGTGTTGAGTTTTTCCTAATACTAAAAGTT---------GCA------GGGGCTAAAAAG---TCACTT------------------------------------ATGTGGAGA---CTTATTTTCTTATCTGTGGTAATGCTAGTAACCGGATACATAGGTGAG---------GCT------------------GTA------GACAGA------------------------------------------------------------------------------------------------GATAATGCG------------------TGGCTATGG---GGATTAATCTCTGGAGCGGCTTACTTTGTAATTGTTTATGACATC---------------TGG------CTA---GGAAGCGCAAAAAAGCTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------MNSFDRKWRTSILVSGLITFIAAVHYWYMRDYWQ-----------------ANAESPTFFRYVDW--------VLTVPLMCVEFFLILKV---A--GAKK-SL------------MWR-LIFLSVVMLVTGYIGE---A------V--DR--------------------------------DNA------WLW-GLISGAAYFVIVYDI-----W--L-GSAKKL---------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_JX312350 [II-CFB-Dokdonia] Dokdonia_sp_HJK-SWE-127_JX312350 gi|404428507|gb|JX312350| Dokdonia sp. HJK-SWE-127 proteorhodpsin (PR) gene, partial cds. Dokdonia sp. HJK-SWE-127 proteorhodpsin (PR) gene, partial cds. JX312350 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Dokdonia] taxon:1221360 genomic DNA strain 30-sept-13 #na #na #na #na #na Phylogenetic characterization of culturable proteorhodopsin-bearing flavobacteria in marine sediments Li,N. and Kim,J.S. Unpublished #na #na CTGGTGTCGGGCTTGATTACATTTATTGCCGCCGTCCATTATTGGTATATGCGCGACTACTGGCAAGCAAATGCTGAGTCACCTACATTTTTTAGGTATGTAGACTGGGTTCTTACAGTACCACTTATGTGTGTTGAATTTTTCCTAATACTAAAAGTTGCAGGAGCTAAAAAGTCACTTATGTGGAGACTGATTTTCTTATCTGTCGTAATGCTAGTAACCGGATACATAGGTGAAGCTGTAGACAGAGACAATGCGTGGCTATGGGGATTAATCTCTGGAGCGGCTTACTTTGTAATTGTTTATGACATCTGGCTAGGAAGCGCAAAAAAGCTTGCT LVSGLITFIAAVHYWYMRDYWQANAESPTFFRYVDWVLTVPLMCVEFFLILKVAGAKKSLMWRLIFLSVVMLVTGYIGEAVDRDNAWLWGLISGAAYFVIVYDIWLGSAKKLA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGGTGTCGGGCTTGATTACATTTATTGCCGCCGTCCATTATTGGTATATGCGCGACTACTGGCAA---------------------------------------------------GCAAATGCTGAGTCACCTACATTTTTTAGGTATGTAGACTGG------------------------GTTCTTACAGTACCACTTATGTGTGTTGAATTTTTCCTAATACTAAAAGTT---------GCA------GGAGCTAAAAAG---TCACTT------------------------------------ATGTGGAGA---CTGATTTTCTTATCTGTCGTAATGCTAGTAACCGGATACATAGGTGAA---------GCT------------------GTA------GACAGA------------------------------------------------------------------------------------------------GACAATGCG------------------TGGCTATGG---GGATTAATCTCTGGAGCGGCTTACTTTGTAATTGTTTATGACATC---------------TGG------CTA---GGAAGCGCAAAAAAGCTTGCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------LVSGLITFIAAVHYWYMRDYWQ-----------------ANAESPTFFRYVDW--------VLTVPLMCVEFFLILKV---A--GAKK-SL------------MWR-LIFLSVVMLVTGYIGE---A------V--DR--------------------------------DNA------WLW-GLISGAAYFVIVYDI-----W--L-GSAKKLA--------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_NZ_AAMZ01000001 [II-CFB-Dokdonia] Dokdonia_donghaensis_MED134_1099517003381_genome_NZ_AAMZ01000001 gi|323435880|gb|NZ_AAMZ01000001| Dokdonia donghaensis MED134 1099517003381, whole genome shotgun sequence Dokdonia donghaensis MED134 1099517003381, whole genome shotgun sequence NZ_AAMZ01000001 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Dokdonia] #na genomic_DNA strain 14-nov-12 #na #na Mediterranean Sea marine 41.66 2.8 Light stimulates growth of proteorhodopsincontaining marine Flavobacteria GomezConsarnau,L., Gonzalez,J.M., CollLlado,M., Gourdon,P., Pascher,T., Neutze,R., PedrosAlio,C. and Pinhassi,J. Nature 445 (7124), 210213 (2007) 17215843 #na ATGAATTTATTACTATTAAGTACTGCACTTGACAAAATTGCATCAGATGATTATGTTGCATTCACGTTTTTTGTAGGAGCTATGGCTATGATGGCCGCAGCTGCCTTTTTCTTTTTATCTATGAACAGCTTTGACCGTAAATGGAGAACATCCATTCTAGTGTCGGGCTTAATTACATTTATTGCCGCCGTCCATTATTGGTATATGCGCGACTACTGGCAAGCAAATGCTGAGTCACCTACATTTTTTAGGTATGTAGACTGGGTTCTTACAGTACCACTTATGTGTGTTGAGTTTTTCCTAATACTAAAAGTTGCAGGAGCTAAAAAGTCACTTATGTGGAGACTGATTTTCTTATCTGTCGTAATGCTAGTAACCGGATACATAGGCGAAGCTGTAGACAGAGATAATGCGTGGCTATGGGGATTAATCTCTGGAGCGGCTTACTTTGTAATTGTTTATGACATCTGGCTAGGAAGCGCGAAAAAACTTGCTGTAAGGGCAGGTGGAGCTGTACTAAGCGCGCACAAAACCCTATGTTGGTTTGTACTTGTGGGATGGGCAATTTACCCTATAGGGTATATGGCTGGAACACCGGGATGGTATGAAGGCATCTTTGGAGGATTATCTCTAGATGTAGTTTACAACCTAGGTGACGCTATTAATAAAATTGGTTTTGGCCTAGTAGTATACAATCTAGCTACCATAGCTTCTAATACAAAATCTCTCGAAGAGACTGCA MNLLLLSTALDKIASDDYVAFTFFVGAMAMMAAAAFFFLSMNSFDRKWRTSILVSGLITFIAAVHYWYMRDYWQANAESPTFFRYVDWVLTVPLMCVEFFLILKVAGAKKSLMWRLIFLSVVMLVTGYIGEAVDRDNAWLWGLISGAAYFVIVYDIWLGSAKKLAVRAGGAVLSAHKTLCWFVLVGWAIYPIGYMAGTPGWYEGIFGGLSLDVVYNLGDAINKIGFGLVVYNLATIASNTKSLEETA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAATTTATTACTATTAAGTACTGCACTTGACAAAATTGCATCAGATGATTATGTTGCATTCACGTTTTTTGTAGGAGCTATGGCTATGATGGCCGCAGCTGCCTTTTTCTTTTTATCTATGAACAGCTTTGACCGTAAATGGAGAACATCCATTCTAGTGTCGGGCTTAATTACATTTATTGCCGCCGTCCATTATTGGTATATGCGCGACTACTGGCAA---------------------------------------------------GCAAATGCTGAGTCACCTACATTTTTTAGGTATGTAGACTGG------------------------GTTCTTACAGTACCACTTATGTGTGTTGAGTTTTTCCTAATACTAAAAGTT---------GCA------GGAGCTAAAAAG---TCACTT------------------------------------ATGTGGAGA---CTGATTTTCTTATCTGTCGTAATGCTAGTAACCGGATACATAGGCGAA---------GCT------------------GTA------GACAGA------------------------------------------------------------------------------------------------GATAATGCG------------------TGGCTATGG---GGATTAATCTCTGGAGCGGCTTACTTTGTAATTGTTTATGACATC---------------TGG------CTA---GGAAGCGCGAAAAAACTTGCTGTAAGG------GCA---GGTGGAGCT---GTA---CTA---AGC---GCG---CAC---AAA---ACCCTA---TGTTGGTTTGTACTTGTG---------------------------------------------------------------GGATGG---------GCAATTTACCCTATAGGGTATATGGCTGGAACACCGGGA---TGGTAT---------GAA---GGCATCTTTGGAGGATTATCT---------------------CTAGATGTAGTTTACAACCTAGGTGACGCTATTAATAAAATTGGTTTTGGCCTAGTAGTATACAATCTAGCTACCATAGCTTCTAATACAAAATCTCTCGAAGAGACTGCA------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------MNLLLLSTALDKIASDDYVAFTFFVGAMAMMAAAAFFFLSMNSFDRKWRTSILVSGLITFIAAVHYWYMRDYWQ-----------------ANAESPTFFRYVDW--------VLTVPLMCVEFFLILKV---A--GAKK-SL------------MWR-LIFLSVVMLVTGYIGE---A------V--DR--------------------------------DNA------WLW-GLISGAAYFVIVYDI-----W--L-GSAKKLAVR--A-GGA-V-L-S-A-H-K-TL-CWFVLV---------------------GW---AIYPIGYMAGTPG-WY---E-GIFGGLS-------LDVVYNLGDAINKIGFGLVVYNLATIASNTKSLEETA------------------------------ [II-CFB-Dokdonia]_FJ862936 [II-CFB-Dokdonia] 31_env_samples_FJ862936 gi|226897416|gb|FJ862936| Uncultured bacterium clone 31 putative proteorhodopsin gene, partial cds Uncultured bacterium clone 31 putative proteorhodopsin gene, partial cds FJ862936 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 07-Dec-2009 #na coastal_seawater Atlantic Ocean marine 38.8489 -75.1076 Lightdependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTAGATTGGGTATTAACCGTACCATTAATGTGTGTTGAATTTTATTTAATTCTTAAAGTAGCTGGAGCGAAAAAATCGTTAATGTGGAGAATGATTTTCTTATCTGTAGTCATGTTAGTTACAGGATACATTGGTGAAGTTTTAAGCAGAGACAATGCTTGGTTATGGGGTCTTCTATCTGGAGCTGCATACTTTGTAATCGTTTATGACATCTGGTTAGGTAGTGCGAAAAAATTAGCTGTTGAGGCTGGAGGAGCTGTTTTACAAGCTCACAAAGCACTTTGCTGGTTTGTATTAGTAGGCTGGGCTATTTACGCTCGA VDWVLTVPLMCVEFYLILKVAGAKKSLMWRMIFLSVVMLVTGYIGEVLSRDNAWLWGLLSGAAYFVIVYDIWLGSAKKLAVEAGGAVLQAHKALCWFVLVGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGATTGG------------------------GTATTAACCGTACCATTAATGTGTGTTGAATTTTATTTAATTCTTAAAGTA---------GCT------GGAGCGAAAAAA---TCGTTA------------------------------------ATGTGGAGA---ATGATTTTCTTATCTGTAGTCATGTTAGTTACAGGATACATTGGTGAA---------GTT------------------TTA------AGCAGA------------------------------------------------------------------------------------------------GACAATGCT------------------TGGTTATGG---GGTCTTCTATCTGGAGCTGCATACTTTGTAATCGTTTATGACATC---------------TGG------TTA---GGTAGTGCGAAAAAATTAGCTGTTGAG------GCT---GGAGGAGCT---GTT---TTA---CAA---GCT---CAC---AAA---GCACTT---TGCTGGTTTGTATTAGTA---------------------------------------------------------------GGCTGG---------GCTATTTACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------VLTVPLMCVEFYLILKV---A--GAKK-SL------------MWR-MIFLSVVMLVTGYIGE---V------L--SR--------------------------------DNA------WLW-GLLSGAAYFVIVYDI-----W--L-GSAKKLAVE--A-GGA-V-L-Q-A-H-K-AL-CWFVLV---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_FJ862946 [II-CFB-Dokdonia] 47_env_samples_FJ862946 gi|226897436|gb|FJ862946| Uncultured bacterium clone 47 putative proteorhodopsin gene, partial cds Uncultured bacterium clone 47 putative proteorhodopsin gene, partial cds FJ862946 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 07-Dec-2009 #na coastal_seawater Atlantic Ocean marine 38.8489 -75.1076 Lightdependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTAGATTGGGTATTAACCGTACCATTAATGTGTGTTGAATTTTATTTAATTCTTAAAGTAGCTGGAGCGAAAAAATCGTTAATGTGGAGAATGATTTTCTTATCTGTAGTCATGTTAGTTACAGGATACATTGGTGAAGTTTTAAGCAGAGACAATGCTTGGTTATGGGGTCTTCTATCTGGAGCTGCATACTTTGTAATCGTTTATGACATCTGGTTAGGTAGTGCGAAAAAATTAGCTGTTGAGGCTGGAGGAGCTGTTTTACAAGCTCACAAAGCACTTTGCTGGTTTGTATTAGTAGGCTGGGCGATTTACGCTCGA VDWVLTVPLMCVEFYLILKVAGAKKSLMWRMIFLSVVMLVTGYIGEVLSRDNAWLWGLLSGAAYFVIVYDIWLGSAKKLAVEAGGAVLQAHKALCWFVLVGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGATTGG------------------------GTATTAACCGTACCATTAATGTGTGTTGAATTTTATTTAATTCTTAAAGTA---------GCT------GGAGCGAAAAAA---TCGTTA------------------------------------ATGTGGAGA---ATGATTTTCTTATCTGTAGTCATGTTAGTTACAGGATACATTGGTGAA---------GTT------------------TTA------AGCAGA------------------------------------------------------------------------------------------------GACAATGCT------------------TGGTTATGG---GGTCTTCTATCTGGAGCTGCATACTTTGTAATCGTTTATGACATC---------------TGG------TTA---GGTAGTGCGAAAAAATTAGCTGTTGAG------GCT---GGAGGAGCT---GTT---TTA---CAA---GCT---CAC---AAA---GCACTT---TGCTGGTTTGTATTAGTA---------------------------------------------------------------GGCTGG---------GCGATTTACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------VLTVPLMCVEFYLILKV---A--GAKK-SL------------MWR-MIFLSVVMLVTGYIGE---V------L--SR--------------------------------DNA------WLW-GLLSGAAYFVIVYDI-----W--L-GSAKKLAVE--A-GGA-V-L-Q-A-H-K-AL-CWFVLV---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_EU683599 [II-CFB-Dokdonia] W85013_env_samples_EU683599 gi|187711671|gb|EU683599| Uncultured bacterium clone W85013 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W85013 putative proteorhodopsin gene, partial cds EU683599 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_50m_depth China Sea marine 30.5 125.52 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCTGCATCTGCTTTTTTCTTTTTATCAATGAATAGCTTCGATAAAAAATGGAGAACTTCTATTTTAGTCTCTGGTCTTATTACTTTCATTGCTGCTGTTCATTATTGGTATATGAGAGACTATTGGGCTGCAAACGTAGAGTCACCAACATTCTTTCGATATGTAGATTGGGTATTAACAGTACCATTAATGTGTGTTGAATTCTTCTTAATACTAAAGGTAGCTGGAGCTAAAAAATCTTTAATGTGGAGATTGATCTTTTTATCTGTAGTAATGCTTGTTACTGGTTACTTTGGTGAA AMMAASAFFFLSMNSFDKKWRTSILVSGLITFIAAVHYWYMRDYWAANVESPTFFRYVDWVLTVPLMCVEFFLILKVAGAKKSLMWRLIFLSVVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCTGCATCTGCTTTTTTCTTTTTATCAATGAATAGCTTCGATAAAAAATGGAGAACTTCTATTTTAGTCTCTGGTCTTATTACTTTCATTGCTGCTGTTCATTATTGGTATATGAGAGACTATTGGGCT---------------------------------------------------GCAAACGTAGAGTCACCAACATTCTTTCGATATGTAGATTGG------------------------GTATTAACAGTACCATTAATGTGTGTTGAATTCTTCTTAATACTAAAGGTA---------GCT------GGAGCTAAAAAA---TCTTTA------------------------------------ATGTGGAGA---TTGATCTTTTTATCTGTAGTAATGCTTGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDKKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------ANVESPTFFRYVDW--------VLTVPLMCVEFFLILKV---A--GAKK-SL------------MWR-LIFLSVVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_EU683504 [II-CFB-Dokdonia] A11004_env_samples_EU683504 gi|187711481|gb|EU683504| Uncultured bacterium clone A11004 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A11004 putative proteorhodopsin gene, partial cds EU683504 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_100m_depth China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCTGTGTTTTTCTTTCTCTCGATGGGGAGTGTAGATAAAAAATGGCGAACTTCATTAATTGTTTCTGGTTTAATTACCTTTATCGCAGCAGTGCATTATTGGTACATGAGAGACTATTGGGCTTCTTTTGGAGAATCCCCAACTTTCTTCCGTTATGTGGATTGGATACTAACTGTTCCACTAATGTGTGTTGAATTTTACTTGATATTAAAAGTTGCAGGAGCGAAGCGTTCTTTGATGTGGAAATTGATTTTCCTAAGTACAATCATGCTTGTTACTGGATACTTTGGTGAA AMMAASVFFFLSMGSVDKKWRTSLIVSGLITFIAAVHYWYMRDYWASFGESPTFFRYVDWILTVPLMCVEFYLILKVAGAKRSLMWKLIFLSTIMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCTGTGTTTTTCTTTCTCTCGATGGGGAGTGTAGATAAAAAATGGCGAACTTCATTAATTGTTTCTGGTTTAATTACCTTTATCGCAGCAGTGCATTATTGGTACATGAGAGACTATTGGGCT---------------------------------------------------TCTTTTGGAGAATCCCCAACTTTCTTCCGTTATGTGGATTGG------------------------ATACTAACTGTTCCACTAATGTGTGTTGAATTTTACTTGATATTAAAAGTT---------GCA------GGAGCGAAGCGT---TCTTTG------------------------------------ATGTGGAAA---TTGATTTTCCTAAGTACAATCATGCTTGTTACTGGATACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLSMGSVDKKWRTSLIVSGLITFIAAVHYWYMRDYWA-----------------SFGESPTFFRYVDW--------ILTVPLMCVEFYLILKV---A--GAKR-SL------------MWK-LIFLSTIMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ926153 [II-CFB-Dokdonia] BOUM_OTU066_env_samples gb|KJ926153| Uncultured bacterium clone BOUM OTU066 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU066 putative proteorhodopsin gene, partial cds KJ926153 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) unknown (T105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 38.96217 14.32367 #na #na #na #na #na GTTGACTGGATACTAACCGTTCCACTTACGTGTGTTGAATTTTACTTGATATTAAAAGTTGCAGGAGCGAAGCGTTCTTTGATGTGGAAATTGATTTTCCTAAGTACAATTATGCTTGTTACTGGATACTTTGGTGAGGCAGTTTACAGAGATAGCGCTTGGTTATGGGGGCTTATATCTGGAGCAGCTTATTTTGTTATAGCATATGAAATCTGGTTTGGTGGAGCCAAAAAATTGGCTGAAGCTTCAACACCAGAGGTTTTAAAATCTCACAAAATGTTGTGCTGGTTTGTATTAGTTGGGTGGGCCATCTAC VDWILTVPLTCVEFYLILKVAGAKRSLMWKLIFLSTIMLVTGYFGEAVYRDSAWLWGLISGAAYFVIAYEIWFGGAKKLAEASTPEVLKSHKMLCWFVLVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGACTGG------------------------ATACTAACCGTTCCACTTACGTGTGTTGAATTTTACTTGATATTAAAAGTT---------GCA------GGAGCGAAGCGT---TCTTTG------------------------------------ATGTGGAAA---TTGATTTTCCTAAGTACAATTATGCTTGTTACTGGATACTTTGGTGAG---------GCA------------------GTT------TACAGA------------------------------------------------------------------------------------------------GATAGCGCT------------------TGGTTATGG---GGGCTTATATCTGGAGCAGCTTATTTTGTTATAGCATATGAAATC---------------TGG------TTT---GGTGGAGCCAAAAAATTGGCTGAAGCT------TCA---ACACCAGAG---GTT---TTA---AAA---TCT---CAC---AAA---ATGTTG---TGCTGGTTTGTATTAGTT---------------------------------------------------------------GGGTGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------ILTVPLTCVEFYLILKV---A--GAKR-SL------------MWK-LIFLSTIMLVTGYFGE---A------V--YR--------------------------------DSA------WLW-GLISGAAYFVIAYEI-----W--F-GGAKKLAEA--S-TPE-V-L-K-S-H-K-ML-CWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_AB557570 [II-CFB-Dokdonia] SG21_Tenacibaculum_AB557570 gi|376317474|gb|AB557570| Tenacibaculum sp SG21 PR gene for proteorhodopsin, partial cds Tenacibaculum sp SG21 PR gene for proteorhodopsin, partial cds AB557570 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Tenacibaculum] taxon:754425 genomic_DNA strain 03MAY2012 #na seawater Pacific Ocean marine 35 139.3333 Diversity and functional analysis of proteorhodopsin in marine Flavobacteria Yoshizawa,S., Kawanabe,A., Ito,H., Kandori,H. and Kogure,K. Environ. Microbiol. 14 (5), 12401248 (2012) 22329552 #na TTTTTCTTTTCTATGAATAATTATGATAGAAAATGGAGAACTTCCATCTTGGTCTCTGGTTTAATTACATTTATTGCCGCAGTCCATTATTGGTACATGAGAGATTATTGGTACACAAATGGAAGTTCACCTACGTTCTTCAGATATGTAGATTGGATTTTGACTGTTCCTTTAATGTGTGTTGAATTCTATTTAATCCTGAAAGTAGCAGGTGCAAAAAAGGATTTAATGTGGAAACTGATTGGATTATCAGTTATTATGTTAGTAACAGGATACTTCGGTGAAGCGGTTTATAGAGATCAAGCGTGGTTATGGGGGTTAATCTCAGGTATAGCTTATTTCGTAATTGTTTACGAAATCTGGCTTGGTTCGGCTAAAAAGTTGGCTGAAAAAGCAGGTGGAGCTGTACTTTCTGCGCATAAAATG FFFSMNNYDRKWRTSILVSGLITFIAAVHYWYMRDYWYTNGSSPTFFRYVDWILTVPLMCVEFYLILKVAGAKKDLMWKLIGLSVIMLVTGYFGEAVYRDQAWLWGLISGIAYFVIVYEIWLGSAKKLAEKAGGAVLSAHKM ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTCTTTTCTATGAATAATTATGATAGAAAATGGAGAACTTCCATCTTGGTCTCTGGTTTAATTACATTTATTGCCGCAGTCCATTATTGGTACATGAGAGATTATTGGTAC---------------------------------------------------ACAAATGGAAGTTCACCTACGTTCTTCAGATATGTAGATTGG------------------------ATTTTGACTGTTCCTTTAATGTGTGTTGAATTCTATTTAATCCTGAAAGTA---------GCA------GGTGCAAAAAAG---GATTTA------------------------------------ATGTGGAAA---CTGATTGGATTATCAGTTATTATGTTAGTAACAGGATACTTCGGTGAA---------GCG------------------GTT------TATAGA------------------------------------------------------------------------------------------------GATCAAGCG------------------TGGTTATGG---GGGTTAATCTCAGGTATAGCTTATTTCGTAATTGTTTACGAAATC---------------TGG------CTT---GGTTCGGCTAAAAAGTTGGCTGAAAAA------GCA---GGTGGAGCT---GTA---CTT---TCT---GCG---CAT---AAA---ATG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------FFFSMNNYDRKWRTSILVSGLITFIAAVHYWYMRDYWY-----------------TNGSSPTFFRYVDW--------ILTVPLMCVEFYLILKV---A--GAKK-DL------------MWK-LIGLSVIMLVTGYFGE---A------V--YR--------------------------------DQA------WLW-GLISGIAYFVIVYEI-----W--L-GSAKKLAEK--A-GGA-V-L-S-A-H-K-M---------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_AB557567 [II-CFB-Dokdonia] SG4_Tenacibaculum_AB557567 gi|376317468|gb|AB557567| Tenacibaculum sp SG4 PR gene for proteorhodopsin, partial cds Tenacibaculum sp SG4 PR gene for proteorhodopsin, partial cds AB557567 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Tenacibaculum] taxon:754424 genomic_DNA strain 03MAY2012 #na seawater Pacific Ocean marine 35 139.3333 Diversity and functional analysis of proteorhodopsin in marine Flavobacteria Yoshizawa,S., Kawanabe,A., Ito,H., Kandori,H. and Kogure,K. Environ. Microbiol. 14 (5), 12401248 (2012) 22329552 #na TTTTTCTTTTCTATGAATAATTATGATAGAAAATGGAGAACTTCCATCTTGGTCTCTGGTTTAATTACATTTATTGCCGCAGTCCATTATTGGTACATGAGAGATTATTGGTACACAAATGGAAGTTCACCTACGTTCTTCAGATATGTAGATTGGATTTTGACTGTTCCTTTAATGTGTGTTGAATTCTATTTAATCCTGAAAGTAGCAGGTGCAAAAAAGGATTTAATGTGGAAACTGATTGGATTATCAGTTATTATGTTAGTAACAGGATACTTCGGTGAAGCGGTTTATAGAGATCAAGCGTGGTTATGGGGGTTAATCTCAGGTATAGCTTATTTCGTAATTGTTTACGAAATCTGGCTTGGTTCGGCTAAAAAGTTGGCTGAAAAAGCAGGTGGAGCTGTACTTTCTGCGCATAAAATG FFFSMNNYDRKWRTSILVSGLITFIAAVHYWYMRDYWYTNGSSPTFFRYVDWILTVPLMCVEFYLILKVAGAKKDLMWKLIGLSVIMLVTGYFGEAVYRDQAWLWGLISGIAYFVIVYEIWLGSAKKLAEKAGGAVLSAHKM ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTCTTTTCTATGAATAATTATGATAGAAAATGGAGAACTTCCATCTTGGTCTCTGGTTTAATTACATTTATTGCCGCAGTCCATTATTGGTACATGAGAGATTATTGGTAC---------------------------------------------------ACAAATGGAAGTTCACCTACGTTCTTCAGATATGTAGATTGG------------------------ATTTTGACTGTTCCTTTAATGTGTGTTGAATTCTATTTAATCCTGAAAGTA---------GCA------GGTGCAAAAAAG---GATTTA------------------------------------ATGTGGAAA---CTGATTGGATTATCAGTTATTATGTTAGTAACAGGATACTTCGGTGAA---------GCG------------------GTT------TATAGA------------------------------------------------------------------------------------------------GATCAAGCG------------------TGGTTATGG---GGGTTAATCTCAGGTATAGCTTATTTCGTAATTGTTTACGAAATC---------------TGG------CTT---GGTTCGGCTAAAAAGTTGGCTGAAAAA------GCA---GGTGGAGCT---GTA---CTT---TCT---GCG---CAT---AAA---ATG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------FFFSMNNYDRKWRTSILVSGLITFIAAVHYWYMRDYWY-----------------TNGSSPTFFRYVDW--------ILTVPLMCVEFYLILKV---A--GAKK-DL------------MWK-LIGLSVIMLVTGYFGE---A------V--YR--------------------------------DQA------WLW-GLISGIAYFVIVYEI-----W--L-GSAKKLAEK--A-GGA-V-L-S-A-H-K-M---------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_AB557572 [II-CFB-Dokdonia] SZ18_Tenacibaculum_AB557572 gi|376317478|gb|AB557572| Tenacibaculum sp SZ18 PR gene for proteorhodopsin, partial cds Tenacibaculum sp SZ18 PR gene for proteorhodopsin, partial cds AB557572 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Tenacibaculum] taxon:754423 genomic_DNA strain 03MAY2012 #na seawater Pacific Ocean marine 35 139.3333 Diversity and functional analysis of proteorhodopsin in marine Flavobacteria Yoshizawa,S., Kawanabe,A., Ito,H., Kandori,H. and Kogure,K. Environ. Microbiol. 14 (5), 12401248 (2012) 22329552 #na TTTTTCTTTTCTATGAATAATTATGATAGAAAATGGAGAACTTCCATCTTGGTCTCTGGTTTAATTACATTTATTGCCGCAGTGCATTATTGGTACATGAGAGATTATTGGTACACAAATGGAAGTTCACCTACGTTCTTCAGATATGTAGATTGGATTTTGACTGTTCCTTTAATGTGTGTTGAATTCTATTTAATCCTGAAAGTAGCAGGTGCAAAAAAGGATTTAATGTGGAAACTGATTGGATTATCAGTTATCATGTTAGTAACAGGATACTTCGGTGAAGCGGTTTATAGAGATCAAGCGTGGTTATGGGGGTTAATCTCAGGTATAGCTTATTTCGTTATTGTTTACGAAATCTGGCTTGGTTCGGCTAAAAAGTTGGCTGAAAAAGTAGGTGGAGCTGTACTTTCTGCGCATAAAATG FFFSMNNYDRKWRTSILVSGLITFIAAVHYWYMRDYWYTNGSSPTFFRYVDWILTVPLMCVEFYLILKVAGAKKDLMWKLIGLSVIMLVTGYFGEAVYRDQAWLWGLISGIAYFVIVYEIWLGSAKKLAEKVGGAVLSAHKM ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTCTTTTCTATGAATAATTATGATAGAAAATGGAGAACTTCCATCTTGGTCTCTGGTTTAATTACATTTATTGCCGCAGTGCATTATTGGTACATGAGAGATTATTGGTAC---------------------------------------------------ACAAATGGAAGTTCACCTACGTTCTTCAGATATGTAGATTGG------------------------ATTTTGACTGTTCCTTTAATGTGTGTTGAATTCTATTTAATCCTGAAAGTA---------GCA------GGTGCAAAAAAG---GATTTA------------------------------------ATGTGGAAA---CTGATTGGATTATCAGTTATCATGTTAGTAACAGGATACTTCGGTGAA---------GCG------------------GTT------TATAGA------------------------------------------------------------------------------------------------GATCAAGCG------------------TGGTTATGG---GGGTTAATCTCAGGTATAGCTTATTTCGTTATTGTTTACGAAATC---------------TGG------CTT---GGTTCGGCTAAAAAGTTGGCTGAAAAA------GTA---GGTGGAGCT---GTA---CTT---TCT---GCG---CAT---AAA---ATG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------FFFSMNNYDRKWRTSILVSGLITFIAAVHYWYMRDYWY-----------------TNGSSPTFFRYVDW--------ILTVPLMCVEFYLILKV---A--GAKK-DL------------MWK-LIGLSVIMLVTGYFGE---A------V--YR--------------------------------DQA------WLW-GLISGIAYFVIVYEI-----W--L-GSAKKLAEK--V-GGA-V-L-S-A-H-K-M---------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_JX312353 [II-CFB-Dokdonia] Aquimarina_sp_DIK-SED-55_JX312353 gi|404428513|gb|JX312353| Aquimarina sp. DIK-SED-55 proteorhodpsin (PR) gene, partial cds. Aquimarina sp. DIK-SED-55 proteorhodpsin (PR) gene, partial cds. JX312353 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Aquimarina] taxon:1221359 genomic DNA strain 30-sept-13 #na #na #na #na #na Phylogenetic characterization of culturable proteorhodopsin-bearing flavobacteria in marine sediments Li,N. and Kim,J.S. Unpublished #na #na ATGAGGGATTATTGGTATATTAACGGGAGCTCTCCCACTTTTTTCCGTTACGTAGACTGGATATTGACTGTTCCACTAATGTGTGTAGAATTCTATCTTATCTTAAAAGTTGCAGGAGCAAAGAAGTCATTGATGTGGCGTTTAATCATTCTTTCTGTAATTATGCTTGTCACGGGATATTTTGGAGAAGCAGTATACAGAGATCAGGCCTGGTTATGGGGTCTTATATCTGGAATAGCTTACTTCGTTATTGTCTATGAT MRDYWYINGSSPTFFRYVDWILTVPLMCVEFYLILKVAGAKKSLMWRLIILSVIMLVTGYFGEAVYRDQAWLWGLISGIAYFVIVYD ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAGGGATTATTGGTAT---------------------------------------------------ATTAACGGGAGCTCTCCCACTTTTTTCCGTTACGTAGACTGG------------------------ATATTGACTGTTCCACTAATGTGTGTAGAATTCTATCTTATCTTAAAAGTT---------GCA------GGAGCAAAGAAG---TCATTG------------------------------------ATGTGGCGT---TTAATCATTCTTTCTGTAATTATGCTTGTCACGGGATATTTTGGAGAA---------GCA------------------GTA------TACAGA------------------------------------------------------------------------------------------------GATCAGGCC------------------TGGTTATGG---GGTCTTATATCTGGAATAGCTTACTTCGTTATTGTCTATGAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MRDYWY-----------------INGSSPTFFRYVDW--------ILTVPLMCVEFYLILKV---A--GAKK-SL------------MWR-LIILSVIMLVTGYFGE---A------V--YR--------------------------------DQA------WLW-GLISGIAYFVIVYD--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_NZ_AFOE01000041_1 [II-CFB-Dokdonia] 372127886_25263_26003_Mesoflavibacter_zeaxanthinifaciens_S86_contig00043_WGS gi|372127886|gb|NZ_AFOE01000041| Mesoflavibacter zeaxanthinifaciens S86 contig00043, whole genome shotgun sequence Mesoflavibacter zeaxanthinifaciens S86 contig00043, whole genome shotgun sequence NZ_AFOE01000041 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Mesoflavibacter] taxon:1004149 genomic_DNA strain 12-May-2013 #na #na Pacific Ocean marine 11.523 151.494 #na #na #na #na #na ATGAAAACTTTATTACTAAACTTACCTCTGTTTGCAGAGGTTACAAAAATTGCCAATGATGACTACGTAGGTTTTACATTTTTTGTTGGATGTATGGCTATGATGGCCGCGTCTGCATTTTTCTTTTTATCAATGAACAATTTTGATAGAAAATGGAAAACTTCAATTTTGGTTTCTGGACTTATTACTTTCATTGCTGCGGTTCACTATTGGTACATGAGAGATTATTGGGGTGCAATTGGGGAATCACCAACCTTCTTTAGATATGTAGATTGGGTATTAACGGTTCCCTTAATGTGTGTAGAATTTTACTTAATCCTAAGAGTAGCCGGAGCAAAAAAATCTTTAATGTGGCGTTTAATCTTCCTTTCCGTAATCATGTTAGTTACTGGCTATCTAGGAGAAGCCGTTTACATAGACCAAGCATGGCTTTGGGGGCTAATTTCAGGTATTGCCTACTTCATAATAGTTTATGATATTTGGCTAGGTAGTGCTAAAAAGCTTGCGATACAAGCAGGCGGCTCTGTACTTAAAGCTCATAAAATGCTATGTTGGTTTGTATTAGTGGGTTGGGCCATATACCCTATCGGTTATATGGCGGGCACACCCGGCTGGTACGAAGGAATCTTTGGTGGACTTGCCATGGACGTAATTTATAATATTGGAGATGCCATCAATAAAATAGGATTTGGCTTGGTTGTATATGGTGCCGCAGTGGCCAGCCAAGAAAAATCTGCT MKTLLLNLPLFAEVTKIANDDYVGFTFFVGCMAMMAASAFFFLSMNNFDRKWKTSILVSGLITFIAAVHYWYMRDYWGAIGESPTFFRYVDWVLTVPLMCVEFYLILRVAGAKKSLMWRLIFLSVIMLVTGYLGEAVYIDQAWLWGLISGIAYFIIVYDIWLGSAKKLAIQAGGSVLKAHKMLCWFVLVGWAIYPIGYMAGTPGWYEGIFGGLAMDVIYNIGDAINKIGFGLVVYGAAVASQEKSA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAACTTTATTACTAAACTTACCTCTGTTTGCAGAGGTTACAAAAATTGCCAATGATGACTACGTAGGTTTTACATTTTTTGTTGGATGTATGGCTATGATGGCCGCGTCTGCATTTTTCTTTTTATCAATGAACAATTTTGATAGAAAATGGAAAACTTCAATTTTGGTTTCTGGACTTATTACTTTCATTGCTGCGGTTCACTATTGGTACATGAGAGATTATTGGGGT---------------------------------------------------GCAATTGGGGAATCACCAACCTTCTTTAGATATGTAGATTGG------------------------GTATTAACGGTTCCCTTAATGTGTGTAGAATTTTACTTAATCCTAAGAGTA---------GCC------GGAGCAAAAAAA---TCTTTA------------------------------------ATGTGGCGT---TTAATCTTCCTTTCCGTAATCATGTTAGTTACTGGCTATCTAGGAGAA---------GCC------------------GTT------TACATA------------------------------------------------------------------------------------------------GACCAAGCA------------------TGGCTTTGG---GGGCTAATTTCAGGTATTGCCTACTTCATAATAGTTTATGATATT---------------TGG------CTA---GGTAGTGCTAAAAAGCTTGCGATACAA------GCA---GGCGGCTCT---GTA---CTT---AAA---GCT---CAT---AAA---ATGCTA---TGTTGGTTTGTATTAGTG---------------------------------------------------------------GGTTGG---------GCCATATACCCTATCGGTTATATGGCGGGCACACCCGGC---TGGTAC---------GAA---GGAATCTTTGGTGGACTTGCC---------------------ATGGACGTAATTTATAATATTGGAGATGCCATCAATAAAATAGGATTTGGCTTGGTTGTATATGGTGCCGCAGTGGCCAGCCAAGAAAAATCTGCT--------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------MKTLLLNLPLFAEVTKIANDDYVGFTFFVGCMAMMAASAFFFLSMNNFDRKWKTSILVSGLITFIAAVHYWYMRDYWG-----------------AIGESPTFFRYVDW--------VLTVPLMCVEFYLILRV---A--GAKK-SL------------MWR-LIFLSVIMLVTGYLGE---A------V--YI--------------------------------DQA------WLW-GLISGIAYFIIVYDI-----W--L-GSAKKLAIQ--A-GGS-V-L-K-A-H-K-ML-CWFVLV---------------------GW---AIYPIGYMAGTPG-WY---E-GIFGGLA-------MDVIYNIGDAINKIGFGLVVYGAAVASQEKSA----------------------------------- [II-CFB-Dokdonia]_NZ_AFOE01000041_2 [II-CFB-Dokdonia] Mesoflavibacter_zeaxanthinifaciens_S86_ctg00043_genome_NZ_AFOE01000041 gi|372127886|gb|NZ_AFOE01000041| Mesoflavibacter zeaxanthinifaciens S86 contig00043, whole genome shotgun sequence Mesoflavibacter zeaxanthinifaciens S86 contig00043, whole genome shotgun sequence NZ_AFOE01000041 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Mesoflavibacter] taxon:1004149 genomic_DNA strain 12-May-2013 #na #na Pacific Ocean marine 11.523 151.494 WholeGenome Sequence of the XylanaseProducing Mesoflavibacter zeaxanthinifaciens Strain S86 Oh,C., Heo,S.J., De Zoysa,M., Affan,A., Jung,W.K., Park,H.S., Lee,Y., Lee,J., Yoon,K.T. and Kang,D.H. J. Bacteriol. 193 (19), 5557 (2011) 21914876 #na ATGAAAACTTTATTACTAAACTTACCTCTGTTTGCAGAGGTTACAAAAATTGCCAATGATGACTACGTAGGTTTTACATTTTTTGTTGGATGTATGGCTATGATGGCCGCGTCTGCATTTTTCTTTTTATCAATGAACAATTTTGATAGAAAATGGAAAACTTCAATTTTGGTTTCTGGACTTATTACTTTCATTGCTGCGGTTCACTATTGGTACATGAGAGATTATTGGGGTGCAATTGGGGAATCACCAACCTTCTTTAGATATGTAGATTGGGTATTAACGGTTCCCTTAATGTGTGTAGAATTTTACTTAATCCTAAGAGTAGCCGGAGCAAAAAAATCTTTAATGTGGCGTTTAATCTTCCTTTCCGTAATCATGTTAGTTACTGGCTATCTAGGAGAAGCCGTTTACATAGACCAAGCATGGCTTTGGGGGCTAATTTCAGGTATTGCCTACTTCATAATAGTTTATGATATTTGGCTAGGTAGTGCTAAAAAGCTTGCGATACAAGCAGGCGGCTCTGTACTTAAAGCTCATAAAATGCTATGTTGGTTTGTATTAGTGGGTTGGGCCATATACCCTATCGGTTATATGGCGGGCACACCCGGCTGGTACGAAGGAATCTTTGGTGGACTTGCCATGGACGTAATTTATAATATTGGAGATGCCATCAATAAAATAGGATTTGGCTTGGTTGTATATGGTGCCGCAGTGGCCAGCCAAGAAAAATCTGCT MKTLLLNLPLFAEVTKIANDDYVGFTFFVGCMAMMAASAFFFLSMNNFDRKWKTSILVSGLITFIAAVHYWYMRDYWGAIGESPTFFRYVDWVLTVPLMCVEFYLILRVAGAKKSLMWRLIFLSVIMLVTGYLGEAVYIDQAWLWGLISGIAYFIIVYDIWLGSAKKLAIQAGGSVLKAHKMLCWFVLVGWAIYPIGYMAGTPGWYEGIFGGLAMDVIYNIGDAINKIGFGLVVYGAAVASQEKSA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAACTTTATTACTAAACTTACCTCTGTTTGCAGAGGTTACAAAAATTGCCAATGATGACTACGTAGGTTTTACATTTTTTGTTGGATGTATGGCTATGATGGCCGCGTCTGCATTTTTCTTTTTATCAATGAACAATTTTGATAGAAAATGGAAAACTTCAATTTTGGTTTCTGGACTTATTACTTTCATTGCTGCGGTTCACTATTGGTACATGAGAGATTATTGGGGT---------------------------------------------------GCAATTGGGGAATCACCAACCTTCTTTAGATATGTAGATTGG------------------------GTATTAACGGTTCCCTTAATGTGTGTAGAATTTTACTTAATCCTAAGAGTA---------GCC------GGAGCAAAAAAA---TCTTTA------------------------------------ATGTGGCGT---TTAATCTTCCTTTCCGTAATCATGTTAGTTACTGGCTATCTAGGAGAA---------GCC------------------GTT------TACATA------------------------------------------------------------------------------------------------GACCAAGCA------------------TGGCTTTGG---GGGCTAATTTCAGGTATTGCCTACTTCATAATAGTTTATGATATT---------------TGG------CTA---GGTAGTGCTAAAAAGCTTGCGATACAA------GCA---GGCGGCTCT---GTA---CTT---AAA---GCT---CAT---AAA---ATGCTA---TGTTGGTTTGTATTAGTG---------------------------------------------------------------GGTTGG---------GCCATATACCCTATCGGTTATATGGCGGGCACACCCGGC---TGGTAC---------GAA---GGAATCTTTGGTGGACTTGCC---------------------ATGGACGTAATTTATAATATTGGAGATGCCATCAATAAAATAGGATTTGGCTTGGTTGTATATGGTGCCGCAGTGGCCAGCCAAGAAAAATCTGCT--------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------MKTLLLNLPLFAEVTKIANDDYVGFTFFVGCMAMMAASAFFFLSMNNFDRKWKTSILVSGLITFIAAVHYWYMRDYWG-----------------AIGESPTFFRYVDW--------VLTVPLMCVEFYLILRV---A--GAKK-SL------------MWR-LIFLSVIMLVTGYLGE---A------V--YI--------------------------------DQA------WLW-GLISGIAYFIIVYDI-----W--L-GSAKKLAIQ--A-GGS-V-L-K-A-H-K-ML-CWFVLV---------------------GW---AIYPIGYMAGTPG-WY---E-GIFGGLA-------MDVIYNIGDAINKIGFGLVVYGAAVASQEKSA----------------------------------- [II-CFB-Dokdonia]_AB557575 [II-CFB-Dokdonia] SA410_Polaribacter_AB557575 gi|376317484|gb|AB557575| Polaribacter sp SA410 PR gene for proteorhodopsin, partial cds Polaribacter sp SA410 PR gene for proteorhodopsin, partial cds AB557575 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Polaribacter] taxon:754397 genomic_DNA strain 03MAY2012 #na sea_ice Pacific Ocean marine 35 139.3333 Diversity and functional analysis of proteorhodopsin in marine Flavobacteria Yoshizawa,S., Kawanabe,A., Ito,H., Kandori,H. and Kogure,K. Environ. Microbiol. 14 (5), 12401248 (2012) 22329552 #na TTCTTTTTATCAATGAATAGTTTTGATAAAAAATGGAGAACTTCACTATTAGTTTCTGGTTTGATTACTTTCATTGCTGCAGTTCATTATTGGTATATGAGAGACTATTGGGCTTCTAACGGAGAATCTCCAACCTTCTTTAGATACGTTGATTGGGTCTTAACTGTTCCCTTAATGTGTGTAGAGTTCTATTTAATCTTAAAAGTTGCAGGAGCTAAAAAATCTTTAATGTGGAGATTAATCTTCTTATCAGTTATTATGCTGGTAACGGGTTATATAGGAGAAGTAATTGATGCACCAAATGCATGGTTATGGGGTCTTATATCTGGCTTGGCTTACTTCGTAATTGTTTATGATATCTGGTTTGGAACTGCCAAGAAACTAGCTATCGAAGCTGGTGGAGCTGTTTTAAAAGCTCACAAAACT FFLSMNSFDKKWRTSLLVSGLITFIAAVHYWYMRDYWASNGESPTFFRYVDWVLTVPLMCVEFYLILKVAGAKKSLMWRLIFLSVIMLVTGYIGEVIDAPNAWLWGLISGLAYFVIVYDIWFGTAKKLAIEAGGAVLKAHKT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTTTATCAATGAATAGTTTTGATAAAAAATGGAGAACTTCACTATTAGTTTCTGGTTTGATTACTTTCATTGCTGCAGTTCATTATTGGTATATGAGAGACTATTGGGCT---------------------------------------------------TCTAACGGAGAATCTCCAACCTTCTTTAGATACGTTGATTGG------------------------GTCTTAACTGTTCCCTTAATGTGTGTAGAGTTCTATTTAATCTTAAAAGTT---------GCA------GGAGCTAAAAAA---TCTTTA------------------------------------ATGTGGAGA---TTAATCTTCTTATCAGTTATTATGCTGGTAACGGGTTATATAGGAGAA---------GTA------------------ATT------GATGCA------------------------------------------------------------------------------------------------CCAAATGCA------------------TGGTTATGG---GGTCTTATATCTGGCTTGGCTTACTTCGTAATTGTTTATGATATC---------------TGG------TTT---GGAACTGCCAAGAAACTAGCTATCGAA------GCT---GGTGGAGCT---GTT---TTA---AAA---GCT---CAC---AAA---ACT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------FFLSMNSFDKKWRTSLLVSGLITFIAAVHYWYMRDYWA-----------------SNGESPTFFRYVDW--------VLTVPLMCVEFYLILKV---A--GAKK-SL------------MWR-LIFLSVIMLVTGYIGE---V------I--DA--------------------------------PNA------WLW-GLISGLAYFVIVYDI-----W--F-GTAKKLAIE--A-GGA-V-L-K-A-H-K-T---------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_AB557583 [II-CFB-Dokdonia] SA447_Flavobacterium_AB557583 gi|376317500|gb|AB557583| Flavobacterium sp SA447 PR gene for proteorhodopsin, partial cds Flavobacterium sp SA447 PR gene for proteorhodopsin, partial cds AB557583 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Flavobacterium] taxon:754433 genomic_DNA strain 03MAY2012 #na seawater Pacific Ocean marine 35 139.3333 Diversity and functional analysis of proteorhodopsin in marine Flavobacteria Yoshizawa,S., Kawanabe,A., Ito,H., Kandori,H. and Kogure,K. Environ. Microbiol. 14 (5), 12401248 (2012) 22329552 #na TTCTTTTTATCAATGAATAGTTTTGATAAAAAATGGAGAACTTCACTATTAGTTTCTGGTTTGATTACTTTCATTGCTGCAGTTCATTATTGGTATATGAGAGACTATTGGGCTTCTAACGGAGAATCTCCAACCTTCTTTAGATACGTTGATTGGGTCTTAACTGTTCCCTTAATGTGTGTAGAGTTCTATTTAATCTTAAAAGTTGCAGGAGCTAAAAAATCTTTAATGTGGAGATTAATCTTCTTATCAGTTATTATGCTGGTAACGGGTTATATAGGAGAAGTAATTGATGCACCAAATGCATGGTTATGGGGTCTTATATCTGGCTTGGCTTACTTCGTAATTGTTTATGATATCTGGTTTGGAACTGCCAAGAAACTAGCTATCGAAGCTGGTGGAGCTGTTTTAAAAGCTCACAAAACT FFLSMNSFDKKWRTSLLVSGLITFIAAVHYWYMRDYWASNGESPTFFRYVDWVLTVPLMCVEFYLILKVAGAKKSLMWRLIFLSVIMLVTGYIGEVIDAPNAWLWGLISGLAYFVIVYDIWFGTAKKLAIEAGGAVLKAHKT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTTTATCAATGAATAGTTTTGATAAAAAATGGAGAACTTCACTATTAGTTTCTGGTTTGATTACTTTCATTGCTGCAGTTCATTATTGGTATATGAGAGACTATTGGGCT---------------------------------------------------TCTAACGGAGAATCTCCAACCTTCTTTAGATACGTTGATTGG------------------------GTCTTAACTGTTCCCTTAATGTGTGTAGAGTTCTATTTAATCTTAAAAGTT---------GCA------GGAGCTAAAAAA---TCTTTA------------------------------------ATGTGGAGA---TTAATCTTCTTATCAGTTATTATGCTGGTAACGGGTTATATAGGAGAA---------GTA------------------ATT------GATGCA------------------------------------------------------------------------------------------------CCAAATGCA------------------TGGTTATGG---GGTCTTATATCTGGCTTGGCTTACTTCGTAATTGTTTATGATATC---------------TGG------TTT---GGAACTGCCAAGAAACTAGCTATCGAA------GCT---GGTGGAGCT---GTT---TTA---AAA---GCT---CAC---AAA---ACT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------FFLSMNSFDKKWRTSLLVSGLITFIAAVHYWYMRDYWA-----------------SNGESPTFFRYVDW--------VLTVPLMCVEFYLILKV---A--GAKK-SL------------MWR-LIFLSVIMLVTGYIGE---V------I--DA--------------------------------PNA------WLW-GLISGLAYFVIVYDI-----W--F-GTAKKLAIE--A-GGA-V-L-K-A-H-K-T---------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_JX863344 [II-CFB-Dokdonia] RCC2387_Polaribacter_JX863344 gi|425477638|gb|JX863344| Polaribacter sp RCC2387 putative proteorhodopsin gene, partial cds Polaribacter sp RCC2387 putative proteorhodopsin gene, partial cds JX863344 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Polaribacter] taxon:1262157 genomic_DNA strain 01-DEC-2012 04Aug2009 30m_depth Arctic Ocean marine 70.88 -130.53 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGGTATTAACAGTGCCATTAATGGCTGTTGAGTTTTATTTAATCCTTAAAATTGCAGGAGCAAAGAAATCTCTATTGTGGAGATTGATTTTATTATCTGTGATCATGCTAGTAACCGGTTATGTAGGTGAAGTGCTAGATGTAAATAATGCTTGGTTCTGGGGTCTTATTTCAGGAATAGCTTATTTCGTAATTGTTTATGACATTTGGTTCGGTACTGCAAAAAAATTAGCAGTAGCAGCTGGTGGAGAAGTATTAAAAGCACACAAAGCATTATGTTGGTTCGTATTGGTA WVLTVPLMAVEFYLILKIAGAKKSLLWRLILLSVIMLVTGYVGEVLDVNNAWFWGLISGIAYFVIVYDIWFGTAKKLAVAAGGEVLKAHKALCWFVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------GTATTAACAGTGCCATTAATGGCTGTTGAGTTTTATTTAATCCTTAAAATT---------GCA------GGAGCAAAGAAA---TCTCTA------------------------------------TTGTGGAGA---TTGATTTTATTATCTGTGATCATGCTAGTAACCGGTTATGTAGGTGAA---------GTG------------------CTA------GATGTA------------------------------------------------------------------------------------------------AATAATGCT------------------TGGTTCTGG---GGTCTTATTTCAGGAATAGCTTATTTCGTAATTGTTTATGACATT---------------TGG------TTC---GGTACTGCAAAAAAATTAGCAGTAGCA------GCT---GGTGGAGAA---GTA---TTA---AAA---GCA---CAC---AAA---GCATTA---TGTTGGTTCGTATTGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------VLTVPLMAVEFYLILKI---A--GAKK-SL------------LWR-LILLSVIMLVTGYVGE---V------L--DV--------------------------------NNA------WFW-GLISGIAYFVIVYDI-----W--F-GTAKKLAVA--A-GGE-V-L-K-A-H-K-AL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_JX863326 [II-CFB-Dokdonia] MALINA_OTU52_270_M_env_samples_JX863326 gi|425477602|gb|JX863326| Uncultured bacterium clone MALINA OTU52 270 M putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU52 270 M putative proteorhodopsin mRNA, partial cds JX863326 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 11Aug2009 3m_depth Arctic Ocean marine 70.68 -139.62 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGGTATTAACAGTACCATTAATGGCTGTTGAATTTTGTTTAATTTTAAAAATTGCAGGAGCTAAAAAATCTTTATTGTGGAGATTAATTTTATTATCTGTTATCATGCTAGTAACCGGTTATGCAGGTGAAGTGTTAGATAGAGATAATGCTTGGTTCTGGGGTCTTATTTCGGGAGCAGCTTACTTCGTAATTGTTTATGACATTTGGTTGGGAACTGCAAAAAAATTAGCAGTAGCAGCTGGTGGAGAGGTGCTAAAAGCACACAAAACATTATGTTGGTTCGTATTAGTT WVLTVPLMAVEFCLILKIAGAKKSLLWRLILLSVIMLVTGYAGEVLDRDNAWFWGLISGAAYFVIVYDIWLGTAKKLAVAAGGEVLKAHKTLCWFVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------GTATTAACAGTACCATTAATGGCTGTTGAATTTTGTTTAATTTTAAAAATT---------GCA------GGAGCTAAAAAA---TCTTTA------------------------------------TTGTGGAGA---TTAATTTTATTATCTGTTATCATGCTAGTAACCGGTTATGCAGGTGAA---------GTG------------------TTA------GATAGA------------------------------------------------------------------------------------------------GATAATGCT------------------TGGTTCTGG---GGTCTTATTTCGGGAGCAGCTTACTTCGTAATTGTTTATGACATT---------------TGG------TTG---GGAACTGCAAAAAAATTAGCAGTAGCA------GCT---GGTGGAGAG---GTG---CTA---AAA---GCA---CAC---AAA---ACATTA---TGTTGGTTCGTATTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------VLTVPLMAVEFCLILKI---A--GAKK-SL------------LWR-LILLSVIMLVTGYAGE---V------L--DR--------------------------------DNA------WFW-GLISGAAYFVIVYDI-----W--L-GTAKKLAVA--A-GGE-V-L-K-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_JX863327 [II-CFB-Dokdonia] MALINA_OTU52_342_M_env_samples_JX863327 gi|425477604|gb|JX863327| Uncultured bacterium clone MALINA OTU52 342 M putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU52 342 M putative proteorhodopsin mRNA, partial cds JX863327 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 02Aug2009 3m_depth Arctic Ocean marine 69.61 -138.23 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGGTATTAACAGTACCATTAATGGCTGTTGAATTTTATTTAATTCTAAAAATTGCAGGAGCTAAAAAATCTTTATTGTGGAGATTAATTTTATTATCTGTTATCATGCTAGTAACCGGTTATGCAGGTGAAGTGTTAGATAGAGATAATGCTTGGTTCTGGGGTCTTATTTCGGGAGCAGCTTACTTCGTAATTGTTTATGACATTTGGTTGGGAACTGCAAAAAAATTAGCAGTAGCAGCTGGTGGAGAGGTGCTAAAAGCACACAAAACATTATGTTGGTTCGTATTAGTT WVLTVPLMAVEFYLILKIAGAKKSLLWRLILLSVIMLVTGYAGEVLDRDNAWFWGLISGAAYFVIVYDIWLGTAKKLAVAAGGEVLKAHKTLCWFVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------GTATTAACAGTACCATTAATGGCTGTTGAATTTTATTTAATTCTAAAAATT---------GCA------GGAGCTAAAAAA---TCTTTA------------------------------------TTGTGGAGA---TTAATTTTATTATCTGTTATCATGCTAGTAACCGGTTATGCAGGTGAA---------GTG------------------TTA------GATAGA------------------------------------------------------------------------------------------------GATAATGCT------------------TGGTTCTGG---GGTCTTATTTCGGGAGCAGCTTACTTCGTAATTGTTTATGACATT---------------TGG------TTG---GGAACTGCAAAAAAATTAGCAGTAGCA------GCT---GGTGGAGAG---GTG---CTA---AAA---GCA---CAC---AAA---ACATTA---TGTTGGTTCGTATTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------VLTVPLMAVEFYLILKI---A--GAKK-SL------------LWR-LILLSVIMLVTGYAGE---V------L--DR--------------------------------DNA------WFW-GLISGAAYFVIVYDI-----W--L-GTAKKLAVA--A-GGE-V-L-K-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_FJ560824 [II-CFB-Dokdonia] HEL104_env_samples_FJ560824 gi|223868795|gb|FJ560824| Uncultured microorganism clone HEL104 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL104 putative proteorhodopsin gene, partial cds FJ560824 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTACCTTTAATGTGTGTTGAATTCTATCTTATTCTTAAAGTTGCTGGTGCCAAAAAGTCTCTTATGTGGAAACTAATTTTCTTGTCGGTTGTTATGCTTGTAACAGGATACTTTGGAGAAGCTGTTTACACTACAGGTACTGGACCGGCTATCTGGGGATTACTATCTGGGCTTGCATATTTTGCAATTGCTTACATGATATGGTTTGGAGAAGCAAAAAAACTTGCCGAACAAGCTGGTGGTGCAGTATTAAAAGCACACAAAACCTTATGTTGG TVPLMCVEFYLILKVAGAKKSLMWKLIFLSVVMLVTGYFGEAVYTTGTGPAIWGLLSGLAYFAIAYMIWFGEAKKLAEQAGGAVLKAHKTLCW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTACCTTTAATGTGTGTTGAATTCTATCTTATTCTTAAAGTT---------GCT------GGTGCCAAAAAG---TCTCTT------------------------------------ATGTGGAAA---CTAATTTTCTTGTCGGTTGTTATGCTTGTAACAGGATACTTTGGAGAA---------GCT------------------GTT------TACACT------------------------------------------------------ACA---------GGT---------------------------ACTGGACCG------------------GCTATCTGG---GGATTACTATCTGGGCTTGCATATTTTGCAATTGCTTACATGATA---------------TGG------TTT---GGAGAAGCAAAAAAACTTGCCGAACAA------GCT---GGTGGTGCA---GTA---TTA---AAA---GCA---CAC---AAA---ACCTTA---TGTTGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLMCVEFYLILKV---A--GAKK-SL------------MWK-LIFLSVVMLVTGYFGE---A------V--YT------------------T---G---------TGP------AIW-GLLSGLAYFAIAYMI-----W--F-GEAKKLAEQ--A-GGA-V-L-K-A-H-K-TL-CW------------------------------------------------------------------------------------------------------------------------------------ [II-CFB-Dokdonia]_FJ560817 [II-CFB-Dokdonia] HEL97_env_samples_FJ560817 gi|223868781|gb|FJ560817| Uncultured microorganism clone HEL97 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL97 putative proteorhodopsin gene, partial cds FJ560817 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTACCTTTAATGTGTGTTGAATTCTATCTTATTCTTAAAGTTGCTGGTGCCAAAAAGTCTCTTATGTGGAAACTAATTTTCTTGTCGGTTGTTATGCTTGTAACAGGATACTTTGGAGAAGCTGTTTACACTACAGGTACTGGACCGGCTATCTGGGGATTACTATCTGGGCTTGCATATTTTGCAATTGCTTACATGATATGGTTTGGAGAAGCAAAAAAACTTGCCGAACAAGCTGGTGGTGCAGTATTAAAAGCACACAAAACCTTATGTTGG TVPLMCVEFYLILKVAGAKKSLMWKLIFLSVVMLVTGYFGEAVYTTGTGPAIWGLLSGLAYFAIAYMIWFGEAKKLAEQAGGAVLKAHKTLCW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTACCTTTAATGTGTGTTGAATTCTATCTTATTCTTAAAGTT---------GCT------GGTGCCAAAAAG---TCTCTT------------------------------------ATGTGGAAA---CTAATTTTCTTGTCGGTTGTTATGCTTGTAACAGGATACTTTGGAGAA---------GCT------------------GTT------TACACT------------------------------------------------------ACA---------GGT---------------------------ACTGGACCG------------------GCTATCTGG---GGATTACTATCTGGGCTTGCATATTTTGCAATTGCTTACATGATA---------------TGG------TTT---GGAGAAGCAAAAAAACTTGCCGAACAA------GCT---GGTGGTGCA---GTA---TTA---AAA---GCA---CAC---AAA---ACCTTA---TGTTGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLMCVEFYLILKV---A--GAKK-SL------------MWK-LIFLSVVMLVTGYFGE---A------V--YT------------------T---G---------TGP------AIW-GLLSGLAYFAIAYMI-----W--F-GEAKKLAEQ--A-GGA-V-L-K-A-H-K-TL-CW------------------------------------------------------------------------------------------------------------------------------------ [II-CFB-Dokdonia]_FJ560823 [II-CFB-Dokdonia] HEL103_env_samples_FJ560823 gi|223868793|gb|FJ560823| Uncultured microorganism clone HEL103 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL103 putative proteorhodopsin gene, partial cds FJ560823 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTACCTTTAATGTGTGTTGAATTCTATCTTATTCTTAAAGTTGCTGGTGCCAAAAAGTCTCTTATGTGGAAACTAATTTTCTTGTCGGTTGTTATGCTTGTAACAGGATACTTTGGAGAAGCTGTTTACACTACAGGTACTGGACCGGCTATCTGGGGATTACTATCTGGGCTTGCATATTTTGCAATTGCTTACATGATATGGTTTGGAGAAGCAAAAAAACTTGCCGAACAAGCTGGTGGTGCAGTATTAAAAGCACACAAAACCTTATGTTGG TVPLMCVEFYLILKVAGAKKSLMWKLIFLSVVMLVTGYFGEAVYTTGTGPAIWGLLSGLAYFAIAYMIWFGEAKKLAEQAGGAVLKAHKTLCW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTACCTTTAATGTGTGTTGAATTCTATCTTATTCTTAAAGTT---------GCT------GGTGCCAAAAAG---TCTCTT------------------------------------ATGTGGAAA---CTAATTTTCTTGTCGGTTGTTATGCTTGTAACAGGATACTTTGGAGAA---------GCT------------------GTT------TACACT------------------------------------------------------ACA---------GGT---------------------------ACTGGACCG------------------GCTATCTGG---GGATTACTATCTGGGCTTGCATATTTTGCAATTGCTTACATGATA---------------TGG------TTT---GGAGAAGCAAAAAAACTTGCCGAACAA------GCT---GGTGGTGCA---GTA---TTA---AAA---GCA---CAC---AAA---ACCTTA---TGTTGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLMCVEFYLILKV---A--GAKK-SL------------MWK-LIFLSVVMLVTGYFGE---A------V--YT------------------T---G---------TGP------AIW-GLLSGLAYFAIAYMI-----W--F-GEAKKLAEQ--A-GGA-V-L-K-A-H-K-TL-CW------------------------------------------------------------------------------------------------------------------------------------ [II-CFB-Dokdonia]_FJ560857 [II-CFB-Dokdonia] HEL147_env_samples_FJ560857 gi|223868861|gb|FJ560857| Uncultured microorganism clone HEL147 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL147 putative proteorhodopsin gene, partial cds FJ560857 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTACCTTTAATGTGTGTTGAATTCTATCTTATTCTTAAAGTTGCTGGTGCCAAAAAGTCTCTTATGTGGAAACTAATTTTCTTGTCGGTTGTTATGCTTGTAACAGGATACTTTGGAGAAGCTGTTTACACTACAGGTACTGGACCGGCTATCTGGGGATTACTATCTGGGCTTGCATATTTTGCAATTGCTTACATGATATGGTTTGGAGAAGCAAAAAAACTTGCCGAACAAGCTGGTGGTGCAGTATTAAAAGCGACACAAAACCTTATGTTG TVPLMCVEFYLILKVAGAKKSLMWKLIFLSVVMLVTGYFGEAVYTTGTGPAIWGLLSGLAYFAIAYMIWFGEAKKLAEQAGGAVLKATQNLML ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTACCTTTAATGTGTGTTGAATTCTATCTTATTCTTAAAGTT---------GCT------GGTGCCAAAAAG---TCTCTT------------------------------------ATGTGGAAA---CTAATTTTCTTGTCGGTTGTTATGCTTGTAACAGGATACTTTGGAGAA---------GCT------------------GTT------TACACT------------------------------------------------------ACA---------GGT---------------------------ACTGGACCG------------------GCTATCTGG---GGATTACTATCTGGGCTTGCATATTTTGCAATTGCTTACATGATA---------------TGG------TTT---GGAGAAGCAAAAAAACTTGCCGAACAA------GCT---GGTGGTGCA---GTA---TTA---AAA---GCG---ACA---CAA---AACCTT---ATGTTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLMCVEFYLILKV---A--GAKK-SL------------MWK-LIFLSVVMLVTGYFGE---A------V--YT------------------T---G---------TGP------AIW-GLLSGLAYFAIAYMI-----W--F-GEAKKLAEQ--A-GGA-V-L-K-A-T-Q-NL-ML------------------------------------------------------------------------------------------------------------------------------------ [II-CFB-Dokdonia]_FJ560782 [II-CFB-Dokdonia] HEL46_env_samples_FJ560782 gi|223868711|gb|FJ560782| Uncultured microorganism clone HEL46 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL46 putative proteorhodopsin gene, partial cds FJ560782 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTACCTTTGATGTGTGTTGAATTCTATCTTATTCTTAAAGTTGCAGGTGCAAAAAAATCAATGATGTGGAAACTTATTTTCTTATCAGTAGTAATGCTTGTAACAGGATATTTTGGAGAAGCTGTTTACACTACAGGTAATGGTCCAGCAATCTGGGGTTTATTCTCTGGACTTGCATACTTTGCCATTGCTTACATGATATGGTTTGGAGAAGCAAAAAAACTTGCCGAACAAGCTGGTGGTGCAGTGTCCCATTTAAACGACAAAACATTGTGTTGG TVPLMCVEFYLILKVAGAKKSMMWKLIFLSVVMLVTGYFGEAVYTTGNGPAIWGLFSGLAYFAIAYMIWFGEAKKLAEQAGGAVSHLNDKTLCW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTACCTTTGATGTGTGTTGAATTCTATCTTATTCTTAAAGTT---------GCA------GGTGCAAAAAAA---TCAATG------------------------------------ATGTGGAAA---CTTATTTTCTTATCAGTAGTAATGCTTGTAACAGGATATTTTGGAGAA---------GCT------------------GTT------TACACT------------------------------------------------------ACA---------GGT---------------------------AATGGTCCA------------------GCAATCTGG---GGTTTATTCTCTGGACTTGCATACTTTGCCATTGCTTACATGATA---------------TGG------TTT---GGAGAAGCAAAAAAACTTGCCGAACAA------GCT---GGTGGTGCA---GTG---TCC---CAT---TTA---AACGACAAA---ACATTG---TGTTGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLMCVEFYLILKV---A--GAKK-SM------------MWK-LIFLSVVMLVTGYFGE---A------V--YT------------------T---G---------NGP------AIW-GLFSGLAYFAIAYMI-----W--F-GEAKKLAEQ--A-GGA-V-S-H-L-NDK-TL-CW------------------------------------------------------------------------------------------------------------------------------------ [II-CFB-Dokdonia]_FJ560784 [II-CFB-Dokdonia] HEL48_env_samples_FJ560784 gi|223868715|gb|FJ560784| Uncultured microorganism clone HEL48 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL48 putative proteorhodopsin gene, partial cds FJ560784 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTACCTTTGATGTGTGTTGAATTCTATCTTATTCTTAAAGTTGCAGGTGCAAAAAAATCAATGATGTGGAAACTTATTTTCTTATCAGTAGTAATGCTTGTAACAGGATATTTTGGAGAAGCTGTTTACACTACAGGTAATGGTCCAGCAATCTGGGGTTTATTCTCTGGACTTGCATACTTTGCCATTGCTTACATGATATGGTTTGGAGAAGCAAAAAAACTTGCCGAACAAGCTGGTGGTGCAGTGTTAAATAGCAAGGACAAAACATTGTGTTGG TVPLMCVEFYLILKVAGAKKSMMWKLIFLSVVMLVTGYFGEAVYTTGNGPAIWGLFSGLAYFAIAYMIWFGEAKKLAEQAGGAVLNSKDKTLCW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTACCTTTGATGTGTGTTGAATTCTATCTTATTCTTAAAGTT---------GCA------GGTGCAAAAAAA---TCAATG------------------------------------ATGTGGAAA---CTTATTTTCTTATCAGTAGTAATGCTTGTAACAGGATATTTTGGAGAA---------GCT------------------GTT------TACACT------------------------------------------------------ACA---------GGT---------------------------AATGGTCCA------------------GCAATCTGG---GGTTTATTCTCTGGACTTGCATACTTTGCCATTGCTTACATGATA---------------TGG------TTT---GGAGAAGCAAAAAAACTTGCCGAACAA------GCT---GGTGGTGCA---GTG---TTA---AAT---AGC---AAGGACAAA---ACATTG---TGTTGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLMCVEFYLILKV---A--GAKK-SM------------MWK-LIFLSVVMLVTGYFGE---A------V--YT------------------T---G---------NGP------AIW-GLFSGLAYFAIAYMI-----W--F-GEAKKLAEQ--A-GGA-V-L-N-S-KDK-TL-CW------------------------------------------------------------------------------------------------------------------------------------ [II-CFB-Dokdonia]_FJ560759 [II-CFB-Dokdonia] HEL13_env_samples_FJ560759 gi|223868665|gb|FJ560759| Uncultured microorganism clone HEL13 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL13 putative proteorhodopsin gene, partial cds FJ560759 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTACCTTTGATGTGTGTTGAATTCTATCTTATTCTTAAAGTTGCAGGTGCAAAAAAATCAATGATGTGGAAACTTATTTTCTTATCAGTAGTAATGCTTGTAACAGGATATTTTGGAGAAGCTGTTTACACTACAGGTAATGGTCCAGCAATCTGGGGTTTATTCTCTGGACTTGCATACTTTGCCATTGCTTACATGATATGGTTTGGAGAAGCAAAAAAACTTGCCGAACAAGCTGGTGGTGCAGTGTTAAAAGCAACGACAAAACATTGTGTT TVPLMCVEFYLILKVAGAKKSMMWKLIFLSVVMLVTGYFGEAVYTTGNGPAIWGLFSGLAYFAIAYMIWFGEAKKLAEQAGGAVLKATTKHCV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTACCTTTGATGTGTGTTGAATTCTATCTTATTCTTAAAGTT---------GCA------GGTGCAAAAAAA---TCAATG------------------------------------ATGTGGAAA---CTTATTTTCTTATCAGTAGTAATGCTTGTAACAGGATATTTTGGAGAA---------GCT------------------GTT------TACACT------------------------------------------------------ACA---------GGT---------------------------AATGGTCCA------------------GCAATCTGG---GGTTTATTCTCTGGACTTGCATACTTTGCCATTGCTTACATGATA---------------TGG------TTT---GGAGAAGCAAAAAAACTTGCCGAACAA------GCT---GGTGGTGCA---GTG---TTA---AAA---GCA---ACG---ACA---AAACAT---TGTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLMCVEFYLILKV---A--GAKK-SM------------MWK-LIFLSVVMLVTGYFGE---A------V--YT------------------T---G---------NGP------AIW-GLFSGLAYFAIAYMI-----W--F-GEAKKLAEQ--A-GGA-V-L-K-A-T-T-KH-CV------------------------------------------------------------------------------------------------------------------------------------ [II-CFB-Dokdonia]_FJ560864 [II-CFB-Dokdonia] HEL154_env_samples_FJ560864 gi|223868875|gb|FJ560864| Uncultured microorganism clone HEL154 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL154 putative proteorhodopsin gene, partial cds FJ560864 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTACCTTTGATGTGTGTTGAATTCTATCTTATTCTTAAAGTTGCAGGTGCAAAAAAATCAATGATGTGGAAACTTATTTTCTTATCAGTAGTAATGCTTGTAACAGGATATTTTGGAGAAGCTGTTTACACTACAGGTAATGGTCCAGCAATCTGGGGTTTATTCTCTGGACTTGCATACTTTGCCATTGCTTACATGATATGGTTTGGAGAAGCAAAAAAACTTGCCGAACAAGCTGGTGGTGCAGTGTTAAAAGCACACAAAACATTGTGTTGG TVPLMCVEFYLILKVAGAKKSMMWKLIFLSVVMLVTGYFGEAVYTTGNGPAIWGLFSGLAYFAIAYMIWFGEAKKLAEQAGGAVLKAHKTLCW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTACCTTTGATGTGTGTTGAATTCTATCTTATTCTTAAAGTT---------GCA------GGTGCAAAAAAA---TCAATG------------------------------------ATGTGGAAA---CTTATTTTCTTATCAGTAGTAATGCTTGTAACAGGATATTTTGGAGAA---------GCT------------------GTT------TACACT------------------------------------------------------ACA---------GGT---------------------------AATGGTCCA------------------GCAATCTGG---GGTTTATTCTCTGGACTTGCATACTTTGCCATTGCTTACATGATA---------------TGG------TTT---GGAGAAGCAAAAAAACTTGCCGAACAA------GCT---GGTGGTGCA---GTG---TTA---AAA---GCA---CAC---AAA---ACATTG---TGTTGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLMCVEFYLILKV---A--GAKK-SM------------MWK-LIFLSVVMLVTGYFGE---A------V--YT------------------T---G---------NGP------AIW-GLFSGLAYFAIAYMI-----W--F-GEAKKLAEQ--A-GGA-V-L-K-A-H-K-TL-CW------------------------------------------------------------------------------------------------------------------------------------ [II-CFB-Dokdonia]_AB557549 [II-CFB-Dokdonia] PC8_Winogradskyella_AB557549 gi|376317432|gb|AB557549| Winogradskyella sp PC8 PR gene for proteorhodopsin, partial cds Winogradskyella sp PC8 PR gene for proteorhodopsin, partial cds AB557549 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Winogradskyella] taxon:754411 genomic_DNA strain 03MAY2012 #na seawater Pacific Ocean marine 35 139.3333 Diversity and functional analysis of proteorhodopsin in marine Flavobacteria Yoshizawa,S., Kawanabe,A., Ito,H., Kandori,H. and Kogure,K. Environ. Microbiol. 14 (5), 12401248 (2012) 22329552 #na TTCTTTTTATCAATGAATAGTTTTGATAAAAAGTGGAGAACTTCAATTCTGGTATCAGGATTAATTACTTTTATTGCAGCAGTGCACTACTGGTACATGAGAGATTATTGGGCTTCGAACGCAGAATCACCAACCTTCTTTAGATATGTTGATTGGGTATTAACAGTTCCTTTGATGTGTGTCGAATTCTATCTCATTCTTAAAGTAGCAGGTGCTAAAAAATCATTAATGTGGAAATTAATTTTTTGGTCTGTTGTAATGTTAGTAGCAGGATACTTTGGAGAGGCTGTCTACAGAGATCAAGCGTGGTTCTGGGGTCTAATTTCAGGTATTGCTTACTTTATTATTGCTTACATGATTTGGTTCGGCGAAGCTAAAAAATTAGCAGAACAAGCAGGTGGAGCTGTATTAGATGCTCATAAAACA FFLSMNSFDKKWRTSILVSGLITFIAAVHYWYMRDYWASNAESPTFFRYVDWVLTVPLMCVEFYLILKVAGAKKSLMWKLIFWSVVMLVAGYFGEAVYRDQAWFWGLISGIAYFIIAYMIWFGEAKKLAEQAGGAVLDAHKT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTTTATCAATGAATAGTTTTGATAAAAAGTGGAGAACTTCAATTCTGGTATCAGGATTAATTACTTTTATTGCAGCAGTGCACTACTGGTACATGAGAGATTATTGGGCT---------------------------------------------------TCGAACGCAGAATCACCAACCTTCTTTAGATATGTTGATTGG------------------------GTATTAACAGTTCCTTTGATGTGTGTCGAATTCTATCTCATTCTTAAAGTA---------GCA------GGTGCTAAAAAA---TCATTA------------------------------------ATGTGGAAA---TTAATTTTTTGGTCTGTTGTAATGTTAGTAGCAGGATACTTTGGAGAG---------GCT------------------GTC------TACAGA------------------------------------------------------------------------------------------------GATCAAGCG------------------TGGTTCTGG---GGTCTAATTTCAGGTATTGCTTACTTTATTATTGCTTACATGATT---------------TGG------TTC---GGCGAAGCTAAAAAATTAGCAGAACAA------GCA---GGTGGAGCT---GTA---TTA---GAT---GCT---CAT---AAA---ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------FFLSMNSFDKKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------SNAESPTFFRYVDW--------VLTVPLMCVEFYLILKV---A--GAKK-SL------------MWK-LIFWSVVMLVAGYFGE---A------V--YR--------------------------------DQA------WFW-GLISGIAYFIIAYMI-----W--F-GEAKKLAEQ--A-GGA-V-L-D-A-H-K-T---------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_AB557558 [II-CFB-Dokdonia] PG19_Polaribacter_AB557558 gi|376317450|gb|AB557558| Polaribacter sp PG19 PR gene for proteorhodopsin, partial cds Polaribacter sp PG19 PR gene for proteorhodopsin, partial cds AB557558 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Polaribacter] taxon:754420 genomic_DNA strain 03MAY2012 #na seawater Pacific Ocean marine 35 139.3333 Diversity and functional analysis of proteorhodopsin in marine Flavobacteria Yoshizawa,S., Kawanabe,A., Ito,H., Kandori,H. and Kogure,K. Environ. Microbiol. 14 (5), 12401248 (2012) 22329552 #na TTCTTTTTATCAATGAATAATTTTGATAGAAAATGGAAAACTTCAATCTTAGTGTCAGGTTTAATTACTTTTATAGCTGCTGTACATTACTGGTACATGAGAGACTATTGGGCTTCAAATGCTGAGTCTCCTACTTTTTTCAGATATGTTGATTGGATATTAACAGTTCCACTAATGTGTGTAGAATTTTATCTTATATTAAAGGTTGCAGGTGCCAAAAAATCAATGATGTGGCGTTTAATTTTCTTATCAGTAATAATGTTAGTAACAGGTTACTTTGGAGAATCAGTATATAGAGATCAAGCTTGGTTCTGGGGTCTTATATCAGGATTAGCATATTTTGCAATTGCATACGACATTTGGTTAGGTAAAGCTAAAAAATTAGCAGAAGAAGCAGGAGGCTCTGTTTTAAAAGCCCATAAAGCT FFLSMNNFDRKWKTSILVSGLITFIAAVHYWYMRDYWASNAESPTFFRYVDWILTVPLMCVEFYLILKVAGAKKSMMWRLIFLSVIMLVTGYFGESVYRDQAWFWGLISGLAYFAIAYDIWLGKAKKLAEEAGGSVLKAHKA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTTTATCAATGAATAATTTTGATAGAAAATGGAAAACTTCAATCTTAGTGTCAGGTTTAATTACTTTTATAGCTGCTGTACATTACTGGTACATGAGAGACTATTGGGCT---------------------------------------------------TCAAATGCTGAGTCTCCTACTTTTTTCAGATATGTTGATTGG------------------------ATATTAACAGTTCCACTAATGTGTGTAGAATTTTATCTTATATTAAAGGTT---------GCA------GGTGCCAAAAAA---TCAATG------------------------------------ATGTGGCGT---TTAATTTTCTTATCAGTAATAATGTTAGTAACAGGTTACTTTGGAGAA---------TCA------------------GTA------TATAGA------------------------------------------------------------------------------------------------GATCAAGCT------------------TGGTTCTGG---GGTCTTATATCAGGATTAGCATATTTTGCAATTGCATACGACATT---------------TGG------TTA---GGTAAAGCTAAAAAATTAGCAGAAGAA------GCA---GGAGGCTCT---GTT---TTA---AAA---GCC---CAT---AAA---GCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------FFLSMNNFDRKWKTSILVSGLITFIAAVHYWYMRDYWA-----------------SNAESPTFFRYVDW--------ILTVPLMCVEFYLILKV---A--GAKK-SM------------MWR-LIFLSVIMLVTGYFGE---S------V--YR--------------------------------DQA------WFW-GLISGLAYFAIAYDI-----W--L-GKAKKLAEE--A-GGS-V-L-K-A-H-K-A---------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_AB557554 [II-CFB-Dokdonia] PG5_Polaribacter_AB557554 gi|376317442|gb|AB557554| Polaribacter sp PG5 PR gene for proteorhodopsin, partial cds Polaribacter sp PG5 PR gene for proteorhodopsin, partial cds AB557554 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Polaribacter] taxon:754418 genomic_DNA strain 03MAY2012 #na seawater Pacific Ocean marine 35 139.3333 Diversity and functional analysis of proteorhodopsin in marine Flavobacteria Yoshizawa,S., Kawanabe,A., Ito,H., Kandori,H. and Kogure,K. Environ. Microbiol. 14 (5), 12401248 (2012) 22329552 #na TTCTTTTTATCAATGAATAATTTTGATAGAAAATGGAAAACTTCAATCTTAGTGTCAGGTTTAATTACTTTTATAGCTGCTGTACATTACTGGTACATGAGAGACTATTGGGCTTCAAATGCTGAGTCTCCTACTTTTTTCAGATATGTTGATTGGATATTAACAGTTCCACTAATGTGTGTAGAATTTTATCTTATATTAAAGGTTGCAGGTGCCAAAAAATCAATGATGTGGAGTTTAATTTTCTTATCAGTAATAATGTTAGTAACAGGTTACTTTGGAGAATCAGTATATAGAGATCAAGCTTGGTTCTGGGGTCTTATATCAGGATTAGCATATTTTGCAATTGCATACGACATTTGGTTAGGTAAAGCTAAAAAATTAGCAGAAGAAGCAGGAGGCTCTGTTTTAAAAGCCCATAAAGCT FFLSMNNFDRKWKTSILVSGLITFIAAVHYWYMRDYWASNAESPTFFRYVDWILTVPLMCVEFYLILKVAGAKKSMMWSLIFLSVIMLVTGYFGESVYRDQAWFWGLISGLAYFAIAYDIWLGKAKKLAEEAGGSVLKAHKA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTTTATCAATGAATAATTTTGATAGAAAATGGAAAACTTCAATCTTAGTGTCAGGTTTAATTACTTTTATAGCTGCTGTACATTACTGGTACATGAGAGACTATTGGGCT---------------------------------------------------TCAAATGCTGAGTCTCCTACTTTTTTCAGATATGTTGATTGG------------------------ATATTAACAGTTCCACTAATGTGTGTAGAATTTTATCTTATATTAAAGGTT---------GCA------GGTGCCAAAAAA---TCAATG------------------------------------ATGTGGAGT---TTAATTTTCTTATCAGTAATAATGTTAGTAACAGGTTACTTTGGAGAA---------TCA------------------GTA------TATAGA------------------------------------------------------------------------------------------------GATCAAGCT------------------TGGTTCTGG---GGTCTTATATCAGGATTAGCATATTTTGCAATTGCATACGACATT---------------TGG------TTA---GGTAAAGCTAAAAAATTAGCAGAAGAA------GCA---GGAGGCTCT---GTT---TTA---AAA---GCC---CAT---AAA---GCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------FFLSMNNFDRKWKTSILVSGLITFIAAVHYWYMRDYWA-----------------SNAESPTFFRYVDW--------ILTVPLMCVEFYLILKV---A--GAKK-SM------------MWS-LIFLSVIMLVTGYFGE---S------V--YR--------------------------------DQA------WFW-GLISGLAYFAIAYDI-----W--L-GKAKKLAEE--A-GGS-V-L-K-A-H-K-A---------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_AB557556 [II-CFB-Dokdonia] PG12_Polaribacter_AB557556 gi|376317446|gb|AB557556| Polaribacter sp PG12 PR gene for proteorhodopsin, partial cds Polaribacter sp PG12 PR gene for proteorhodopsin, partial cds AB557556 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Polaribacter] taxon:754419 genomic_DNA strain 03MAY2012 #na seawater Pacific Ocean marine 35 139.3333 Diversity and functional analysis of proteorhodopsin in marine Flavobacteria Yoshizawa,S., Kawanabe,A., Ito,H., Kandori,H. and Kogure,K. Environ. Microbiol. 14 (5), 12401248 (2012) 22329552 #na TTCTTTTTATCAATGAATAATTTTGATAGAAAATGGAAAACTTCAATTTTAGTGTCAGGTTTAATTACTTTTATAGCTGCTGTTCACTATTGGTACATGAGAGATTATTGGGCTTCAAATGCTGAGTCTCCTACTTTTTTCAGATATGTTGATTGGATATTAACAGTTCCGCTAATGTGTGTAGAATTTTATCTTATACTCAAGGTTGCAGGTGCCAAAAAATCAATGATGTGGCGTTTAATTTTCTTATCAGTAATAATGTTGGTAACAGGTTACTTTGGAGAATCAGTATATAGAGATCAAGCTTGGTTCTGGGGTCTTATATCAGGATTAGCATATTTTGCAATTGCATACGACATTTGGTTAGGTAAAGCTAAAAAATTAGCAGAAGAGGCAGGAGGATCTGTTTTAAAAGCCCATAAAGCT FFLSMNNFDRKWKTSILVSGLITFIAAVHYWYMRDYWASNAESPTFFRYVDWILTVPLMCVEFYLILKVAGAKKSMMWRLIFLSVIMLVTGYFGESVYRDQAWFWGLISGLAYFAIAYDIWLGKAKKLAEEAGGSVLKAHKA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTTTATCAATGAATAATTTTGATAGAAAATGGAAAACTTCAATTTTAGTGTCAGGTTTAATTACTTTTATAGCTGCTGTTCACTATTGGTACATGAGAGATTATTGGGCT---------------------------------------------------TCAAATGCTGAGTCTCCTACTTTTTTCAGATATGTTGATTGG------------------------ATATTAACAGTTCCGCTAATGTGTGTAGAATTTTATCTTATACTCAAGGTT---------GCA------GGTGCCAAAAAA---TCAATG------------------------------------ATGTGGCGT---TTAATTTTCTTATCAGTAATAATGTTGGTAACAGGTTACTTTGGAGAA---------TCA------------------GTA------TATAGA------------------------------------------------------------------------------------------------GATCAAGCT------------------TGGTTCTGG---GGTCTTATATCAGGATTAGCATATTTTGCAATTGCATACGACATT---------------TGG------TTA---GGTAAAGCTAAAAAATTAGCAGAAGAG------GCA---GGAGGATCT---GTT---TTA---AAA---GCC---CAT---AAA---GCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------FFLSMNNFDRKWKTSILVSGLITFIAAVHYWYMRDYWA-----------------SNAESPTFFRYVDW--------ILTVPLMCVEFYLILKV---A--GAKK-SM------------MWR-LIFLSVIMLVTGYFGE---S------V--YR--------------------------------DQA------WFW-GLISGLAYFAIAYDI-----W--L-GKAKKLAEE--A-GGS-V-L-K-A-H-K-A---------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_FJ618945 [II-CFB-Dokdonia] PR_108_08_01_env_samples_FJ618945 gi|223046773|gb|FJ618945| Uncultured bacterium clone PR 108 08 01 proteorhodopsin gene, partial cds Uncultured bacterium clone PR 108 08 01 proteorhodopsin gene, partial cds FJ618945 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-juil-09 #na Arctic_Ocean Arctic Ocean marine 71.37 -156.68 Photoheterotrophic microbes in the Arctic Ocean in summer and winter Cottrell,M.T. and Kirchman,D.L. Appl. Environ. Microbiol. 75 (15), 49584966 (2009) 19502441 #na TACGTGGATTGGGTATTGACAGTGCCATTAATGTGTGTTGAGTTCTACTTAATTCTAAAAGTAGCAGGAGCTAAAAAATCGTTAATGTGGCGATTAATTTTCTTATCTGTAGTAATGTTAGTTACAGGTTACATGGGAGAAGTTCTTTACAGAGACCAAGCATGGTTCTGGGGATTAATTTCAGGTCTAGCATATTTCGTAATTGTGTATGACATCTGGTTCGGTACTGCTAAGAAACTAGCAGAAGCTGCAGGCGGAGCTGTATTAAAAGCACACAAAACATTATGTTGGTTTGTATTAGTTGGATGGGCAATCTAC YVDWVLTVPLMCVEFYLILKVAGAKKSLMWRLIFLSVVMLVTGYMGEVLYRDQAWFWGLISGLAYFVIVYDIWFGTAKKLAEAAGGAVLKAHKTLCWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACGTGGATTGG------------------------GTATTGACAGTGCCATTAATGTGTGTTGAGTTCTACTTAATTCTAAAAGTA---------GCA------GGAGCTAAAAAA---TCGTTA------------------------------------ATGTGGCGA---TTAATTTTCTTATCTGTAGTAATGTTAGTTACAGGTTACATGGGAGAA---------GTT------------------CTT------TACAGA------------------------------------------------------------------------------------------------GACCAAGCA------------------TGGTTCTGG---GGATTAATTTCAGGTCTAGCATATTTCGTAATTGTGTATGACATC---------------TGG------TTC---GGTACTGCTAAGAAACTAGCAGAAGCT------GCA---GGCGGAGCT---GTA---TTA---AAA---GCA---CAC---AAA---ACATTA---TGTTGGTTTGTATTAGTT---------------------------------------------------------------GGATGG---------GCAATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------VLTVPLMCVEFYLILKV---A--GAKK-SL------------MWR-LIFLSVVMLVTGYMGE---V------L--YR--------------------------------DQA------WFW-GLISGLAYFVIVYDI-----W--F-GTAKKLAEA--A-GGA-V-L-K-A-H-K-TL-CWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_JX863343 [II-CFB-Dokdonia] RCC2386_Polaribacter_JX863343 gi|425477636|gb|JX863343| Polaribacter sp RCC2386 putative proteorhodopsin gene, partial cds Polaribacter sp RCC2386 putative proteorhodopsin gene, partial cds JX863343 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Polaribacter] taxon:1262156 genomic_DNA strain 01-DEC-2012 04Aug2009 0m_depth Arctic Ocean marine 71.27 -130.61 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGGTATTGACAGTGCCATTAATGTGTGTTGAGTTCTACTTAATTCTAAAAGTAGCAGGAGCTAAAAAATCGTTAATGTGGCGATTAATTTTCTTATCTGTAGTAATGTTAGTTACAGGTTACATGGGAGAAGTTCTTTACAGAGACCAAGCATGGTTCTGGGGATTAATTTCAGGTCTAGCATATTTCGTAATTGTGTATGACATCTGGTTCGGTACTGCTAAGAAACTAGCAGAAGCTGCAGGCGGAGCTGTATTAAAAGCACACAAAACATTATGTTGGTTTGTATTAGTT WVLTVPLMCVEFYLILKVAGAKKSLMWRLIFLSVVMLVTGYMGEVLYRDQAWFWGLISGLAYFVIVYDIWFGTAKKLAEAAGGAVLKAHKTLCWFVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------GTATTGACAGTGCCATTAATGTGTGTTGAGTTCTACTTAATTCTAAAAGTA---------GCA------GGAGCTAAAAAA---TCGTTA------------------------------------ATGTGGCGA---TTAATTTTCTTATCTGTAGTAATGTTAGTTACAGGTTACATGGGAGAA---------GTT------------------CTT------TACAGA------------------------------------------------------------------------------------------------GACCAAGCA------------------TGGTTCTGG---GGATTAATTTCAGGTCTAGCATATTTCGTAATTGTGTATGACATC---------------TGG------TTC---GGTACTGCTAAGAAACTAGCAGAAGCT------GCA---GGCGGAGCT---GTA---TTA---AAA---GCA---CAC---AAA---ACATTA---TGTTGGTTTGTATTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------VLTVPLMCVEFYLILKV---A--GAKK-SL------------MWR-LIFLSVVMLVTGYMGE---V------L--YR--------------------------------DQA------WFW-GLISGLAYFVIVYDI-----W--F-GTAKKLAEA--A-GGA-V-L-K-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_JX863180 [II-CFB-Dokdonia] MALINA_OTU18_421_M_env_samples_JX863180 gi|425477310|gb|JX863180| Uncultured bacterium clone MALINA OTU18 421 M putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU18 421 M putative proteorhodopsin gene, partial cds JX863180 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 16Aug2009 0m_depth Arctic Ocean marine 69.51 -133.42 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGGTATTGACAGTGCCATTAATGTGTGTTGAGTTCTACTTAATTCTAAAAGTAGCGGGAGCTAAAAAATCGTTAATGTGGCGATTAATTTTCTTATCTGTAGTAATGTTAGTTACAGGTTACATGGGAGAAGTTCTTTACAGAGACCAAGCATGGTTCTGGGGATTAATTTCAGGTCTAGCATATTTCGTAATTGTGTATGACATCTGGTTCGGTACTGCTAAGAAACTAGCAGAAGCTGCAGGTGGAGCTGTATTAAAAGCACACAAAACATTATGTTGGTTTGTATTAGTT WVLTVPLMCVEFYLILKVAGAKKSLMWRLIFLSVVMLVTGYMGEVLYRDQAWFWGLISGLAYFVIVYDIWFGTAKKLAEAAGGAVLKAHKTLCWFVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------GTATTGACAGTGCCATTAATGTGTGTTGAGTTCTACTTAATTCTAAAAGTA---------GCG------GGAGCTAAAAAA---TCGTTA------------------------------------ATGTGGCGA---TTAATTTTCTTATCTGTAGTAATGTTAGTTACAGGTTACATGGGAGAA---------GTT------------------CTT------TACAGA------------------------------------------------------------------------------------------------GACCAAGCA------------------TGGTTCTGG---GGATTAATTTCAGGTCTAGCATATTTCGTAATTGTGTATGACATC---------------TGG------TTC---GGTACTGCTAAGAAACTAGCAGAAGCT------GCA---GGTGGAGCT---GTA---TTA---AAA---GCA---CAC---AAA---ACATTA---TGTTGGTTTGTATTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------VLTVPLMCVEFYLILKV---A--GAKK-SL------------MWR-LIFLSVVMLVTGYMGE---V------L--YR--------------------------------DQA------WFW-GLISGLAYFVIVYDI-----W--F-GTAKKLAEA--A-GGA-V-L-K-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_FJ618947 [II-CFB-Dokdonia] PR_108_08_03_env_samples_FJ618947 gi|223046777|gb|FJ618947| Uncultured bacterium clone PR 108 08 03 proteorhodopsin gene, partial cds Uncultured bacterium clone PR 108 08 03 proteorhodopsin gene, partial cds FJ618947 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-juil-09 #na Arctic_Ocean Arctic Ocean marine 71.37 -156.68 Photoheterotrophic microbes in the Arctic Ocean in summer and winter Cottrell,M.T. and Kirchman,D.L. Appl. Environ. Microbiol. 75 (15), 49584966 (2009) 19502441 #na TACGTTGACTGGGTATTGACAGTGCCATTAATGTGTGTTGAGTTCTACTTAATTCTAAAAGTAGCGGGAGCTAAAAAATCGTTAATGTGGCGATTAATTTTCTTATCTGTAGTAATGTTAGTTACAGGTTACATGGGAGAAGTTCTTTACAGAGACCAAGCATGGTTCTGGGGATTAATTTCAGGTCTAGCATATTTCGTAATTGTGTATGACATCTGGTTCGGTACTGCTAAGAAACTAGCAGAAGCTGCAGGTGGAGCTGTATTAAAAGCACACAAAACATTATGTTGGTTTGTATTAGTTGGATGGGCCATCTAC YVDWVLTVPLMCVEFYLILKVAGAKKSLMWRLIFLSVVMLVTGYMGEVLYRDQAWFWGLISGLAYFVIVYDIWFGTAKKLAEAAGGAVLKAHKTLCWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACGTTGACTGG------------------------GTATTGACAGTGCCATTAATGTGTGTTGAGTTCTACTTAATTCTAAAAGTA---------GCG------GGAGCTAAAAAA---TCGTTA------------------------------------ATGTGGCGA---TTAATTTTCTTATCTGTAGTAATGTTAGTTACAGGTTACATGGGAGAA---------GTT------------------CTT------TACAGA------------------------------------------------------------------------------------------------GACCAAGCA------------------TGGTTCTGG---GGATTAATTTCAGGTCTAGCATATTTCGTAATTGTGTATGACATC---------------TGG------TTC---GGTACTGCTAAGAAACTAGCAGAAGCT------GCA---GGTGGAGCT---GTA---TTA---AAA---GCA---CAC---AAA---ACATTA---TGTTGGTTTGTATTAGTT---------------------------------------------------------------GGATGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------VLTVPLMCVEFYLILKV---A--GAKK-SL------------MWR-LIFLSVVMLVTGYMGE---V------L--YR--------------------------------DQA------WFW-GLISGLAYFVIVYDI-----W--F-GTAKKLAEA--A-GGA-V-L-K-A-H-K-TL-CWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_GU338838 [II-CFB-Dokdonia] GH_GLACIER_C_4B6_env_samples_GU338838 gi|283574546|gb|GU338838| Uncultured Antarctic sea ice bacterium clone GH GLACIER C 4B6 putative proteorhodopsin gene, partial cds Uncultured Antarctic sea ice bacterium clone GH GLACIER C 4B6 putative proteorhodopsin gene, partial cds GU338838 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:219048 genomic_DNA other 27Aug-2010 #na bottom_sea_ice Antarctic Ocean marine -77.016667 162.866667 Proteorhodopsinbearing bacteria in Antarctic sea ice Koh,E.Y., AtamnaIsmaeel,N., Martin,A., Cowie,R.O., Beja,O., Davy,S.K., Maas,E.W. and Ryan,K.G. Appl. Environ. Microbiol. 76 (17), 59185925 (2010) 20601510 #na GCTTGCGCGCAATTCTTACGATATATTGACTGGATCTTAACGGTTCCATTAATGTGTGTTGAGTTTTATTTAATCTTAAAAGTTGCTGGAGCAAAGAAGTCTCTAATGTGGCGATTAATTTTCTTATCTGTAGTAATGTTAGTTACAGGATACATAGGAGAAGTTCTTTACAGAGACGCTGCTTGGTTCTGGGGATTAATTTCAGGACTTGCTTATTTTGCAATCGTGTATGAAATCTGGTTTGGTACTGCTAAAAAATTGGCAGAAGCTGCAGGTGGATCGGTTCTTAAAGCGCACAAAGCATTATGTTGGTTCGTATTAGTAGGTTGGGCGATATACCCAAGCTTGCGCGCAAGC ACAQFLRYIDWILTVPLMCVEFYLILKVAGAKKSLMWRLIFLSVVMLVTGYIGEVLYRDAAWFWGLISGLAYFAIVYEIWFGTAKKLAEAAGGSVLKAHKALCWFVLVGWAIYPSLRAS ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTTGCGCGCAATTCTTACGATATATTGACTGG------------------------ATCTTAACGGTTCCATTAATGTGTGTTGAGTTTTATTTAATCTTAAAAGTT---------GCT------GGAGCAAAGAAG---TCTCTA------------------------------------ATGTGGCGA---TTAATTTTCTTATCTGTAGTAATGTTAGTTACAGGATACATAGGAGAA---------GTT------------------CTT------TACAGA------------------------------------------------------------------------------------------------GACGCTGCT------------------TGGTTCTGG---GGATTAATTTCAGGACTTGCTTATTTTGCAATCGTGTATGAAATC---------------TGG------TTT---GGTACTGCTAAAAAATTGGCAGAAGCT------GCA---GGTGGATCG---GTT---CTT---AAA---GCG---CAC---AAA---GCATTA---TGTTGGTTCGTATTAGTA---------------------------------------------------------------GGTTGG---------GCGATATACCCAAGCTTGCGCGCAAGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAQFLRYIDW--------ILTVPLMCVEFYLILKV---A--GAKK-SL------------MWR-LIFLSVVMLVTGYIGE---V------L--YR--------------------------------DAA------WFW-GLISGLAYFAIVYEI-----W--F-GTAKKLAEA--A-GGS-V-L-K-A-H-K-AL-CWFVLV---------------------GW---AIYPSLRAS--------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_GU338834 [II-CFB-Dokdonia] CR_C_5M8_env_samples_GU338834 gi|283574539|gb|GU338834| Uncultured Antarctic sea ice bacterium clone CR C 5M8 putative proteorhodopsin pseudogene, partial sequence Uncultured Antarctic sea ice bacterium clone CR C 5M8 putative proteorhodopsin pseudogene, partial sequence GU338834 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump D97 ; Q108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:219048 genomic_DNA other 27Aug-2010 #na middle_sea_ice Antarctic Ocean marine -77.016667 163.166667 Proteorhodopsinbearing bacteria in Antarctic sea ice Koh,E.Y., AtamnaIsmaeel,N., Martin,A., Cowie,R.O., Beja,O., Davy,S.K., Maas,E.W. and Ryan,K.G. Appl. Environ. Microbiol. 76 (17), 59185925 (2010) 20601510 #na ATAGATTGGGTCTTAACACCTCCATTAATGGCTGTACAGTTTTATTTAATACTAAAAATTGCAGGAGCAAAAAAATCTCTAATGTGGAGATTAATTTTCTTATCTGTGGTAATGCTTGTAACCGGTTATATCGGAGAGGCAATTAACCCACAAAATGCCCAAGTTTGGGGTCTTATCTCACCTATTGCTTACTTTGTAATTGTATACGATATTTGGCTAGGTACTGCTAATAAATTACCT IDWVLTPPLMAVQFYLILKIAGAKKSLMWRLIFLSVVMLVTGYIGEAINPQNAQVWGLISPIAYFVIVYDIWLGTANKLP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAGATTGG------------------------GTCTTAACACCTCCATTAATGGCTGTACAGTTTTATTTAATACTAAAAATT---------GCA------GGAGCAAAAAAA---TCTCTA------------------------------------ATGTGGAGA---TTAATTTTCTTATCTGTGGTAATGCTTGTAACCGGTTATATCGGAGAG---------GCA------------------ATT------AACCCA------------------------------------------------------------------------------------------------CAAAATGCC------------------CAAGTTTGG---GGTCTTATCTCACCTATTGCTTACTTTGTAATTGTATACGATATT---------------TGG------CTA---GGTACTGCTAATAAATTACCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDW--------VLTPPLMAVQFYLILKI---A--GAKK-SL------------MWR-LIFLSVVMLVTGYIGE---A------I--NP--------------------------------QNA------QVW-GLISPIAYFVIVYDI-----W--L-GTANKLP--------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_GU338836 [II-CFB-Dokdonia] TNB_C_1M8_env_samples_GU338836 gi|283574542|gb|GU338836| Uncultured Antarctic sea ice bacterium clone TNB C 1M8 putative proteorhodopsin gene, partial cds Uncultured Antarctic sea ice bacterium clone TNB C 1M8 putative proteorhodopsin gene, partial cds GU338836 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:219048 genomic_DNA other 27Aug-2010 #na middle_sea_ice Antarctic Ocean marine -74.633333 164.216667 Proteorhodopsinbearing bacteria in Antarctic sea ice Koh,E.Y., AtamnaIsmaeel,N., Martin,A., Cowie,R.O., Beja,O., Davy,S.K., Maas,E.W. and Ryan,K.G. Appl. Environ. Microbiol. 76 (17), 59185925 (2010) 20601510 #na GCTTGCGCGCAATTCTTTAGATACATAGATTGGGTCTTAACAGTTCCATTAATGGCTGTAGAGTTTTATTTAATACTAAAAATTGCAGGAGCAAAAAAATCTCTAATGTGGAGATTAATTTTCTTATCTGTGGTAATGCTTGTAACCGGTTATATCGGAGAGGCAATTAACCCAGAAAATGCACAAGTTTGGGGTCTTATCTCAGGTATTGCTTACTTTGTAATTGTATACGATATTTGGTTAGGTACTGCTAAGAAATTAGCTGTAGAGGCTGGTGGAGTAGTATTAACGGCACACAAAGCATTGTGTTGGTTCGTATTAGTTGGGTGGGCGATTTATCCAAGCTTGCGCGCAAGC ACAQFFRYIDWVLTVPLMAVEFYLILKIAGAKKSLMWRLIFLSVVMLVTGYIGEAINPENAQVWGLISGIAYFVIVYDIWLGTAKKLAVEAGGVVLTAHKALCWFVLVGWAIYPSLRAS ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTTGCGCGCAATTCTTTAGATACATAGATTGG------------------------GTCTTAACAGTTCCATTAATGGCTGTAGAGTTTTATTTAATACTAAAAATT---------GCA------GGAGCAAAAAAA---TCTCTA------------------------------------ATGTGGAGA---TTAATTTTCTTATCTGTGGTAATGCTTGTAACCGGTTATATCGGAGAG---------GCA------------------ATT------AACCCA------------------------------------------------------------------------------------------------GAAAATGCA------------------CAAGTTTGG---GGTCTTATCTCAGGTATTGCTTACTTTGTAATTGTATACGATATT---------------TGG------TTA---GGTACTGCTAAGAAATTAGCTGTAGAG------GCT---GGTGGAGTA---GTA---TTA---ACG---GCA---CAC---AAA---GCATTG---TGTTGGTTCGTATTAGTT---------------------------------------------------------------GGGTGG---------GCGATTTATCCAAGCTTGCGCGCAAGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAQFFRYIDW--------VLTVPLMAVEFYLILKI---A--GAKK-SL------------MWR-LIFLSVVMLVTGYIGE---A------I--NP--------------------------------ENA------QVW-GLISGIAYFVIVYDI-----W--L-GTAKKLAVE--A-GGV-V-L-T-A-H-K-AL-CWFVLV---------------------GW---AIYPSLRAS--------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_CP004349 [II-CFB-Dokdonia] Polaribacter_sp_MED152_1099517003559_genome_NZ_CH902588 gi|472252225|gb|CP004349| Polaribacter sp MED152, complete genome Polaribacter sp MED152, complete genome CP004349 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Polaribacter] taxon:313598 genomic_DNA strain 31-janv-14 #na #na Mediterranean Sea marine 41.66667 2.8 #na #na #na #na #na ATGAGTTTAATTACAAATTTTTTAGCTGTAGCAAAAATGGCACCAGATGATTATGTAGGTTTTACATTCTTTGTAGGCTGCATGGCAATGATGGCTGCTTCAGTATTTTTCTTTTTATCAATGAGTAGTTTTGATAAAAAATGGAGGACATCAATTTTAGTGTCTGGTTTAATTACTTTTATTGCAGCAGTGCACTATTGGTATATGAGAGATTATTGGGCTGCAAACGCAGAATCACCAACATTCTTTAGATATGTTGACTGGGTTTTAACAGTACCATTAATGTGTGTTGAGTTCTTTTTAATATTAAAAGTTGCAGGGGCAAAGAAGTCTTTAATGTGGCGATTAATCTTTTTATCTGTAGTAATGTTAGTTACTGGATATATGGGAGAAGTACTATTTAGAGAGCAAGCTTGGTTCTGGGGATTAGTTTCTGGTATTGCATATTTTGTAATTGTTTATGATATTTGGTTAGGTAAAGCTAAAAAATTAGCAGTAGCTGCTGGTGGTTCTGTATTAAAAGCGCACAAAACTCTATGTTGGTTCGTTTTAGTTGGTTGGGCAATTTACCCAATTGGATATATGGCTGGAACTCCAGGTTGGTACGAAAGTATTTTTGGAGGATGGAACTTAGATGTTATTTACAATATTGGAGATGCCATTAACAAAATTGGTTTTGGATTGGTTATTTATAATTTAGCTGTTCAAAGTTCAGACGAAATAAAGAAA MSLITNFLAVAKMAPDDYVGFTFFVGCMAMMAASVFFFLSMSSFDKKWRTSILVSGLITFIAAVHYWYMRDYWAANAESPTFFRYVDWVLTVPLMCVEFFLILKVAGAKKSLMWRLIFLSVVMLVTGYMGEVLFREQAWFWGLVSGIAYFVIVYDIWLGKAKKLAVAAGGSVLKAHKTLCWFVLVGWAIYPIGYMAGTPGWYESIFGGWNLDVIYNIGDAINKIGFGLVIYNLAVQSSDEIKK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAGTTTAATTACAAATTTTTTAGCTGTAGCAAAAATGGCACCAGATGATTATGTAGGTTTTACATTCTTTGTAGGCTGCATGGCAATGATGGCTGCTTCAGTATTTTTCTTTTTATCAATGAGTAGTTTTGATAAAAAATGGAGGACATCAATTTTAGTGTCTGGTTTAATTACTTTTATTGCAGCAGTGCACTATTGGTATATGAGAGATTATTGGGCT---------------------------------------------------GCAAACGCAGAATCACCAACATTCTTTAGATATGTTGACTGG------------------------GTTTTAACAGTACCATTAATGTGTGTTGAGTTCTTTTTAATATTAAAAGTT---------GCA------GGGGCAAAGAAG---TCTTTA------------------------------------ATGTGGCGA---TTAATCTTTTTATCTGTAGTAATGTTAGTTACTGGATATATGGGAGAA---------GTA------------------CTA------TTTAGA------------------------------------------------------------------------------------------------GAGCAAGCT------------------TGGTTCTGG---GGATTAGTTTCTGGTATTGCATATTTTGTAATTGTTTATGATATT---------------TGG------TTA---GGTAAAGCTAAAAAATTAGCAGTAGCT------GCT---GGTGGTTCT---GTA---TTA---AAA---GCG---CAC---AAA---ACTCTA---TGTTGGTTCGTTTTAGTT---------------------------------------------------------------GGTTGG---------GCAATTTACCCAATTGGATATATGGCTGGAACTCCAGGT---TGGTAC---------GAA---AGTATTTTTGGAGGATGGAAC---------------------TTAGATGTTATTTACAATATTGGAGATGCCATTAACAAAATTGGTTTTGGATTGGTTATTTATAATTTAGCTGTTCAAAGTTCAGACGAAATAAAGAAA------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------MSLITNFLAVAKMAPDDYVGFTFFVGCMAMMAASVFFFLSMSSFDKKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------ANAESPTFFRYVDW--------VLTVPLMCVEFFLILKV---A--GAKK-SL------------MWR-LIFLSVVMLVTGYMGE---V------L--FR--------------------------------EQA------WFW-GLVSGIAYFVIVYDI-----W--L-GKAKKLAVA--A-GGS-V-L-K-A-H-K-TL-CWFVLV---------------------GW---AIYPIGYMAGTPG-WY---E-SIFGGWN-------LDVIYNIGDAINKIGFGLVIYNLAVQSSDEIKK---------------------------------- [II-CFB]_EU683591 [II-CFB] W8504_env_samples_EU683591 gi|187711655|gb|EU683591| Uncultured bacterium clone W8504 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W8504 putative proteorhodopsin gene, partial cds EU683591 [[proteorhodopsin super-cluster II/CFB-like cluster]] proteorhodopsin super-cluster II CFB-like cluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_50m_depth China Sea marine 30.5 125.52 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCATTTTTCTTTTTATCAATGAACAGTTTTGATAAAAAATGGAGAACCTCTATTCTAGTTTCTGGTTTAATTACTTTTATAGCTGCTGTGCACTATTGGTACATGAGAGATTATTGGGCTTCTAATGCAGAATCGCCAACTTTCTTTAGATATGTAGATTGGATTTTAACTGTACCTTTAATGTGTGTAGAGTTTTTCTCAATTTTAAAAGTAGCAGGAGCAAAAAAATCTTCTTTAATGTGGAGACTTATATTTTTCTCAGTTATAATGTTAGTAACTGGTTACTTTGGTGAA AMMAASAFFFLSMNSFDKKWRTSILVSGLITFIAAVHYWYMRDYWASNAESPTFFRYVDWILTVPLMCVEFFSILKVAGAKKSSLMWRLIFFSVIMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCATTTTTCTTTTTATCAATGAACAGTTTTGATAAAAAATGGAGAACCTCTATTCTAGTTTCTGGTTTAATTACTTTTATAGCTGCTGTGCACTATTGGTACATGAGAGATTATTGGGCT---------------------------------------------------TCTAATGCAGAATCGCCAACTTTCTTTAGATATGTAGATTGG------------------------ATTTTAACTGTACCTTTAATGTGTGTAGAGTTTTTCTCAATTTTAAAAGTA---------GCA------GGAGCAAAAAAATCTTCTTTA------------------------------------ATGTGGAGA---CTTATATTTTTCTCAGTTATAATGTTAGTAACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDKKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------SNAESPTFFRYVDW--------ILTVPLMCVEFFSILKV---A--GAKKSSL------------MWR-LIFFSVIMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB]_EU683595 [II-CFB] W8509_env_samples_EU683595 gi|187711663|gb|EU683595| Uncultured bacterium clone W8509 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W8509 putative proteorhodopsin gene, partial cds EU683595 [[proteorhodopsin super-cluster II/CFB-like cluster]] proteorhodopsin super-cluster II CFB-like cluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_50m_depth China Sea marine 30.5 125.52 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCTGCATCAGCATTTTTCTTTTTATCAATGAACAGTTTTGATAAAAAATGGAGAACCTCTATTCTAGTTTCTGGTTTAATTACTTTTATAGCTGCTGTGCACTATTGGTACATGAGAGATTATTGGGCTTCTAATGCAGAATCGCCAACTTTCTTTAGATATGTAGATTGGATTTTAACTGTACCTTTAATGTGTGTAGAGTTTTTCTTAATTTTAAAAGTAGCAGGAGCAAAAAAATCTTTAATGTGGAGACTTATATTTTTCTCAGTTATAATGTTAGTAACTGGTTACATTGGTGAA AMMAASAFFFLSMNSFDKKWRTSILVSGLITFIAAVHYWYMRDYWASNAESPTFFRYVDWILTVPLMCVEFFLILKVAGAKKSLMWRLIFFSVIMLVTGYIGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCTGCATCAGCATTTTTCTTTTTATCAATGAACAGTTTTGATAAAAAATGGAGAACCTCTATTCTAGTTTCTGGTTTAATTACTTTTATAGCTGCTGTGCACTATTGGTACATGAGAGATTATTGGGCT---------------------------------------------------TCTAATGCAGAATCGCCAACTTTCTTTAGATATGTAGATTGG------------------------ATTTTAACTGTACCTTTAATGTGTGTAGAGTTTTTCTTAATTTTAAAAGTA---------GCA------GGAGCAAAAAAA---TCTTTA------------------------------------ATGTGGAGA---CTTATATTTTTCTCAGTTATAATGTTAGTAACTGGTTACATTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDKKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------SNAESPTFFRYVDW--------ILTVPLMCVEFFLILKV---A--GAKK-SL------------MWR-LIFFSVIMLVTGYIGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB]_EU683590 [II-CFB] W8503_env_samples_EU683590 gi|187711653|gb|EU683590| Uncultured bacterium clone W8503 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W8503 putative proteorhodopsin gene, partial cds EU683590 [[proteorhodopsin super-cluster II/CFB-like cluster]] proteorhodopsin super-cluster II CFB-like cluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_50m_depth China Sea marine 30.5 125.52 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCTGCATCAGCATTTTTCTTTTTATCAATGAACAGTTTTGATAAAAAATGGAGAACCTCTATTCTAGTTTCTGGTTTAATTACTTTTATAGCTGCTGTGCACTATTGGTACATGAGAGATTATTGGGCTTCTAATGCAGAATCGCCAACTTTCTTTAGATATGTAGATTGGATTTTAACTGTACCTTTAATGTGTGTAGAGTTTTTCTTAATTTTAAAAGTAGCAGGAGCAAAAAAATCTTTAATGTGGAGACTTATATTTTTCTCAGTTATAATGTTAGTAACTGGTTACTTTGGTGAA AMMAASAFFFLSMNSFDKKWRTSILVSGLITFIAAVHYWYMRDYWASNAESPTFFRYVDWILTVPLMCVEFFLILKVAGAKKSLMWRLIFFSVIMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCTGCATCAGCATTTTTCTTTTTATCAATGAACAGTTTTGATAAAAAATGGAGAACCTCTATTCTAGTTTCTGGTTTAATTACTTTTATAGCTGCTGTGCACTATTGGTACATGAGAGATTATTGGGCT---------------------------------------------------TCTAATGCAGAATCGCCAACTTTCTTTAGATATGTAGATTGG------------------------ATTTTAACTGTACCTTTAATGTGTGTAGAGTTTTTCTTAATTTTAAAAGTA---------GCA------GGAGCAAAAAAA---TCTTTA------------------------------------ATGTGGAGA---CTTATATTTTTCTCAGTTATAATGTTAGTAACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDKKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------SNAESPTFFRYVDW--------ILTVPLMCVEFFLILKV---A--GAKK-SL------------MWR-LIFFSVIMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB]_EU683598 [II-CFB] W85012_env_samples_EU683598 gi|187711669|gb|EU683598| Uncultured bacterium clone W85012 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W85012 putative proteorhodopsin gene, partial cds EU683598 [[proteorhodopsin super-cluster II/CFB-like cluster]] proteorhodopsin super-cluster II CFB-like cluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_50m_depth China Sea marine 30.5 125.52 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCTGCATCAGCATTTTTCTTTTTATCAATGAACAGTTTTGATAAAAAATGGAGAACCTCTATTCTAGTTTCTGGTTTAATTACTTTTATAGCTGCTGTGCACTATTGGTACATGAGAGATTATTGGGCTTCTAATGCAGAATCGCCAACTTTCTTTAGATATGTAGATTGGATTTTAACTGTACCTTTAATGTGTGTAGAGTTTTTCTTAATTTTAAAAGTAGCAGGAGCAAAAAAATCTTTAATGTGGAGACTTATATTTTTCTCAGTTATAATGTTAGTTACTGGTTACTTTGGTGAA AMMAASAFFFLSMNSFDKKWRTSILVSGLITFIAAVHYWYMRDYWASNAESPTFFRYVDWILTVPLMCVEFFLILKVAGAKKSLMWRLIFFSVIMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCTGCATCAGCATTTTTCTTTTTATCAATGAACAGTTTTGATAAAAAATGGAGAACCTCTATTCTAGTTTCTGGTTTAATTACTTTTATAGCTGCTGTGCACTATTGGTACATGAGAGATTATTGGGCT---------------------------------------------------TCTAATGCAGAATCGCCAACTTTCTTTAGATATGTAGATTGG------------------------ATTTTAACTGTACCTTTAATGTGTGTAGAGTTTTTCTTAATTTTAAAAGTA---------GCA------GGAGCAAAAAAA---TCTTTA------------------------------------ATGTGGAGA---CTTATATTTTTCTCAGTTATAATGTTAGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDKKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------SNAESPTFFRYVDW--------ILTVPLMCVEFFLILKV---A--GAKK-SL------------MWR-LIFFSVIMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB]_EU683600 [II-CFB] W85014_env_samples_EU683600 gi|187711673|gb|EU683600| Uncultured bacterium clone W85014 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W85014 putative proteorhodopsin gene, partial cds EU683600 [[proteorhodopsin super-cluster II/CFB-like cluster]] proteorhodopsin super-cluster II CFB-like cluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_50m_depth China Sea marine 30.5 125.52 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCTGCATCAGCATTTTTCTTTTTATCAATGAACAGTTTTGATAAAAAATGGAGAACCTCTATTCTAGTTTCTGGTTTAATTACTTTTATAGCTGCTGTGCACTATTGGTACATGAGAGATTATTGGGCTTCTAATGCAGAATCGCCAACTTTCTTTAGATATGTAGATTGGATTTTAACTGTACCTTTAATGTGTGTAGAGTTTTTCTTAATTTTAAAAGTAGCAGGAGCAAAAAAATCTTTAATGTGGAGACTTATATTTTTCTCAGTTATAATGTTAGTTACTGGTTACTTTGGTGAA AMMAASAFFFLSMNSFDKKWRTSILVSGLITFIAAVHYWYMRDYWASNAESPTFFRYVDWILTVPLMCVEFFLILKVAGAKKSLMWRLIFFSVIMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCTGCATCAGCATTTTTCTTTTTATCAATGAACAGTTTTGATAAAAAATGGAGAACCTCTATTCTAGTTTCTGGTTTAATTACTTTTATAGCTGCTGTGCACTATTGGTACATGAGAGATTATTGGGCT---------------------------------------------------TCTAATGCAGAATCGCCAACTTTCTTTAGATATGTAGATTGG------------------------ATTTTAACTGTACCTTTAATGTGTGTAGAGTTTTTCTTAATTTTAAAAGTA---------GCA------GGAGCAAAAAAA---TCTTTA------------------------------------ATGTGGAGA---CTTATATTTTTCTCAGTTATAATGTTAGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDKKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------SNAESPTFFRYVDW--------ILTVPLMCVEFFLILKV---A--GAKK-SL------------MWR-LIFFSVIMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB]_EU683596 [II-CFB] W85010_env_samples_EU683596 gi|187711665|gb|EU683596| Uncultured bacterium clone W85010 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W85010 putative proteorhodopsin gene, partial cds EU683596 [[proteorhodopsin super-cluster II/CFB-like cluster]] proteorhodopsin super-cluster II CFB-like cluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_50m_depth China Sea marine 30.5 125.52 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCATTTTTCTTTTTATCAATGAACAGTTTTGATAAAAAATGGAGAACCTCTATTCTAGTTTCTGGTTTAATTACTTTTATAGCTGCTGTGCACTATTGGTACATGAGAGATTATTGGGCTTCTAATGCAGAATCGCCAACTTTCTTTAGATATGTAGATTGGATTTTAACTGTACCTTTAATGTGTGTAGAGTTTTTCTTAATTTTAAAAGTAGCAGGAGCAAAAAAATCTTTAATGTGGAGACTTATATTTTTCTCAGTTATAATGTTAGTTACTGGATACTTTGGTGAA AMMAASAFFFLSMNSFDKKWRTSILVSGLITFIAAVHYWYMRDYWASNAESPTFFRYVDWILTVPLMCVEFFLILKVAGAKKSLMWRLIFFSVIMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCATTTTTCTTTTTATCAATGAACAGTTTTGATAAAAAATGGAGAACCTCTATTCTAGTTTCTGGTTTAATTACTTTTATAGCTGCTGTGCACTATTGGTACATGAGAGATTATTGGGCT---------------------------------------------------TCTAATGCAGAATCGCCAACTTTCTTTAGATATGTAGATTGG------------------------ATTTTAACTGTACCTTTAATGTGTGTAGAGTTTTTCTTAATTTTAAAAGTA---------GCA------GGAGCAAAAAAA---TCTTTA------------------------------------ATGTGGAGA---CTTATATTTTTCTCAGTTATAATGTTAGTTACTGGATACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDKKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------SNAESPTFFRYVDW--------ILTVPLMCVEFFLILKV---A--GAKK-SL------------MWR-LIFFSVIMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB]_EU683594 [II-CFB] W8508_env_samples_EU683594 gi|187711661|gb|EU683594| Uncultured bacterium clone W8508 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W8508 putative proteorhodopsin gene, partial cds EU683594 [[proteorhodopsin super-cluster II/CFB-like cluster]] proteorhodopsin super-cluster II CFB-like cluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_50m_depth China Sea marine 30.5 125.52 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCATTTTTCTTTTTATCAATGAACAGTTTTGATAAAAAATGGAGAACCTCTATTCTAGTTTCTGGTTTAATTACTTTTATAGCTGCTGTGCACTATTGGTACATGAGAGATTATTGGGCTTCTAATGCAGAATCGCCAACTTTCTTTAGATATGTAGATTGGATTTTAACTGTACCTTTAATGTGTGTAGAGTTTTTCTTAATTTTAAAAGTAGCAGGAGCAAAAAAATCTTTAATGTGGAGACTTATATTTTTCTCAGTTATAATGTTAGTTACTGGTTACTTTGGTGAA AMMAASAFFFLSMNSFDKKWRTSILVSGLITFIAAVHYWYMRDYWASNAESPTFFRYVDWILTVPLMCVEFFLILKVAGAKKSLMWRLIFFSVIMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCATTTTTCTTTTTATCAATGAACAGTTTTGATAAAAAATGGAGAACCTCTATTCTAGTTTCTGGTTTAATTACTTTTATAGCTGCTGTGCACTATTGGTACATGAGAGATTATTGGGCT---------------------------------------------------TCTAATGCAGAATCGCCAACTTTCTTTAGATATGTAGATTGG------------------------ATTTTAACTGTACCTTTAATGTGTGTAGAGTTTTTCTTAATTTTAAAAGTA---------GCA------GGAGCAAAAAAA---TCTTTA------------------------------------ATGTGGAGA---CTTATATTTTTCTCAGTTATAATGTTAGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDKKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------SNAESPTFFRYVDW--------ILTVPLMCVEFFLILKV---A--GAKK-SL------------MWR-LIFFSVIMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB]_EU683550 [II-CFB] W14_env_samples_EU683550 gi|187711573|gb|EU683550| Uncultured bacterium clone W14 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W14 putative proteorhodopsin gene, partial cds EU683550 [[proteorhodopsin super-cluster II/CFB-like cluster]] proteorhodopsin super-cluster II CFB-like cluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_[near_Yangtzi_River_estuary]_surface_water_[2m] China Sea marine 31.3 122.2 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCATTTTTCTTTTTATCAATGAACAGTTTTGATAAAAAATGGAGAACCTCTATTCTAGTTTCTGGTTTAATTACTTTTATAGCTGCTGTGCACTATTGGTACATGAGAGATTATTGGGCTTCTAATGCAGAATCGCCAACTTTCTTTAGATATGTAGATTGGATTTTAACTGTACCTTTAATGTGTGTAGAGTTTTTCTTAATTTTAAAAGTAGCAGGAGCAAAAAAATCTTTAATGTGGAGACTTATATTTTTCTCAGTTATAATGTTAGTTACTGGTTACATTGGTGAA AMMAASAFFFLSMNSFDKKWRTSILVSGLITFIAAVHYWYMRDYWASNAESPTFFRYVDWILTVPLMCVEFFLILKVAGAKKSLMWRLIFFSVIMLVTGYIGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCATTTTTCTTTTTATCAATGAACAGTTTTGATAAAAAATGGAGAACCTCTATTCTAGTTTCTGGTTTAATTACTTTTATAGCTGCTGTGCACTATTGGTACATGAGAGATTATTGGGCT---------------------------------------------------TCTAATGCAGAATCGCCAACTTTCTTTAGATATGTAGATTGG------------------------ATTTTAACTGTACCTTTAATGTGTGTAGAGTTTTTCTTAATTTTAAAAGTA---------GCA------GGAGCAAAAAAA---TCTTTA------------------------------------ATGTGGAGA---CTTATATTTTTCTCAGTTATAATGTTAGTTACTGGTTACATTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDKKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------SNAESPTFFRYVDW--------ILTVPLMCVEFFLILKV---A--GAKK-SL------------MWR-LIFFSVIMLVTGYIGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB]_EU683597 [II-CFB] W85011_env_samples_EU683597 gi|187711667|gb|EU683597| Uncultured bacterium clone W85011 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W85011 putative proteorhodopsin gene, partial cds EU683597 [[proteorhodopsin super-cluster II/CFB-like cluster]] proteorhodopsin super-cluster II CFB-like cluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_50m_depth China Sea marine 30.5 125.52 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCATTTTTCTTTTTATCAATGAACAGTTTTGATAAAAAATGGAGAACCTCTATTCTAGTTTCTGGTTTAATTACTTTTATAGCTGCTGTGCACCATTGGTACATGAGAGATTATTGGGCTTCTAATGCAGAATCGCCAACTTTCTTTAGATATGTAGATTGGATTTTAACTGTACCTTTAATGTGTGTAGAGTTTTTCTTAATTTTAAAAGTAGCAGGAGCAAAAAAATCTTTAATGTGGAGACTTATATTTTTCTCAGTTATAATGTTAGTTACTGGTTACATTGGTGAA AMMAASAFFFLSMNSFDKKWRTSILVSGLITFIAAVHHWYMRDYWASNAESPTFFRYVDWILTVPLMCVEFFLILKVAGAKKSLMWRLIFFSVIMLVTGYIGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCATTTTTCTTTTTATCAATGAACAGTTTTGATAAAAAATGGAGAACCTCTATTCTAGTTTCTGGTTTAATTACTTTTATAGCTGCTGTGCACCATTGGTACATGAGAGATTATTGGGCT---------------------------------------------------TCTAATGCAGAATCGCCAACTTTCTTTAGATATGTAGATTGG------------------------ATTTTAACTGTACCTTTAATGTGTGTAGAGTTTTTCTTAATTTTAAAAGTA---------GCA------GGAGCAAAAAAA---TCTTTA------------------------------------ATGTGGAGA---CTTATATTTTTCTCAGTTATAATGTTAGTTACTGGTTACATTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDKKWRTSILVSGLITFIAAVHHWYMRDYWA-----------------SNAESPTFFRYVDW--------ILTVPLMCVEFFLILKV---A--GAKK-SL------------MWR-LIFFSVIMLVTGYIGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB]_EU683589 [II-CFB] W8502_env_samples_EU683589 gi|187711651|gb|EU683589| Uncultured bacterium clone W8502 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W8502 putative proteorhodopsin gene, partial cds EU683589 [[proteorhodopsin super-cluster II/CFB-like cluster]] proteorhodopsin super-cluster II CFB-like cluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_50m_depth China Sea marine 30.5 125.52 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCATTTTTCTTTTTATCAATGAACAGTTTTGATAAAAAATGGAGAACCTCTATTCTAGTTTCTGGTTTAATTACTTTTATAGCTGCTGTGCACTATTGGTACATGAGAGATTATTGGGCTTCTAATGCAGAATCGCCAACTTTCTTTAGATATGTAGATTGGATTTTAACTGTACCTTTAATGTGTGTAGAGTTTTTCTTAATTTTAAAAGTAGCAGGAGCAAAAAAATCTTTAATGTGGAGACTTATATTTTTCTCAGTTATAATGTTAGTTACTGGTTATATTGGTGAA AMMAASAFFFLSMNSFDKKWRTSILVSGLITFIAAVHYWYMRDYWASNAESPTFFRYVDWILTVPLMCVEFFLILKVAGAKKSLMWRLIFFSVIMLVTGYIGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCATTTTTCTTTTTATCAATGAACAGTTTTGATAAAAAATGGAGAACCTCTATTCTAGTTTCTGGTTTAATTACTTTTATAGCTGCTGTGCACTATTGGTACATGAGAGATTATTGGGCT---------------------------------------------------TCTAATGCAGAATCGCCAACTTTCTTTAGATATGTAGATTGG------------------------ATTTTAACTGTACCTTTAATGTGTGTAGAGTTTTTCTTAATTTTAAAAGTA---------GCA------GGAGCAAAAAAA---TCTTTA------------------------------------ATGTGGAGA---CTTATATTTTTCTCAGTTATAATGTTAGTTACTGGTTATATTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDKKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------SNAESPTFFRYVDW--------ILTVPLMCVEFFLILKV---A--GAKK-SL------------MWR-LIFFSVIMLVTGYIGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_EU683521 [II-CFB-Polaribacter] A12009_env_samples_EU683521 gi|187711515|gb|EU683521| Uncultured bacterium clone A12009 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A12009 putative proteorhodopsin gene, partial cds EU683521 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_200m_depth China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCCTTTTTCTTCCTATCCATGAACTCTTTTGACAGCAAATGGAGAACCTCCATTTTGGTTTCAGGTTTAATCACCTTTATCGCTGCGGTACATTATTGGTACATGAGAGACTACTGGGCAAGTGGAAATGGTTCACCAACCTTTTTCCGATATGTCGATTGGATTCTGACTGTTCCACTAATGTGTGTAGAGTTTTACCTCATTCTAAAAGCAGCTGGAGCCACAAAATCATTAATGTGGAAACTAATTCTATTATCAACAGTAATGCTTGTAACTGGTTACATTGGTGAA AMMAASAFFFLSMNSFDSKWRTSILVSGLITFIAAVHYWYMRDYWASGNGSPTFFRYVDWILTVPLMCVEFYLILKAAGATKSLMWKLILLSTVMLVTGYIGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCCTTTTTCTTCCTATCCATGAACTCTTTTGACAGCAAATGGAGAACCTCCATTTTGGTTTCAGGTTTAATCACCTTTATCGCTGCGGTACATTATTGGTACATGAGAGACTACTGGGCA---------------------------------------------------AGTGGAAATGGTTCACCAACCTTTTTCCGATATGTCGATTGG------------------------ATTCTGACTGTTCCACTAATGTGTGTAGAGTTTTACCTCATTCTAAAAGCA---------GCT------GGAGCCACAAAA---TCATTA------------------------------------ATGTGGAAA---CTAATTCTATTATCAACAGTAATGCTTGTAACTGGTTACATTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDSKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------SGNGSPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GATK-SL------------MWK-LILLSTVMLVTGYIGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_EU683496 [II-CFB-Polaribacter] A1606_env_samples_EU683496 gi|187711465|gb|EU683496| Uncultured bacterium clone A1606 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A1606 putative proteorhodopsin gene, partial cds EU683496 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_60m_depth China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCGTTTTTCTTCCTATCTATGAACTCTTTTGACAGTAAATGGAGAACCTCCATTTTGGTATCAGGTTTAATTACCTTTATCGCTGCGGTACATTATTGGTACATGAGAGACTACTGGGCAAGTGGAAATGGTTCACCAACCTTTTTCCGATATGTCGATTGGACTTTGACTGTTCCACTAATGTGTGTAGAGTTTTACCTCATTCTTAAAGCAGCTGGAGCCACAAAATCATTAATGTGGAAACTTATTCTATTATCAACAGTAATGCTTGTAACTGGTTACTTTGGTGAA AMMAASAFFFLSMNSFDSKWRTSILVSGLITFIAAVHYWYMRDYWASGNGSPTFFRYVDWTLTVPLMCVEFYLILKAAGATKSLMWKLILLSTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCGTTTTTCTTCCTATCTATGAACTCTTTTGACAGTAAATGGAGAACCTCCATTTTGGTATCAGGTTTAATTACCTTTATCGCTGCGGTACATTATTGGTACATGAGAGACTACTGGGCA---------------------------------------------------AGTGGAAATGGTTCACCAACCTTTTTCCGATATGTCGATTGG------------------------ACTTTGACTGTTCCACTAATGTGTGTAGAGTTTTACCTCATTCTTAAAGCA---------GCT------GGAGCCACAAAA---TCATTA------------------------------------ATGTGGAAA---CTTATTCTATTATCAACAGTAATGCTTGTAACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDSKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------SGNGSPTFFRYVDW--------TLTVPLMCVEFYLILKA---A--GATK-SL------------MWK-LILLSTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_EU683475 [II-CFB-Polaribacter] A06_02_env_samples_EU683475 gi|187711423|gb|EU683475| Uncultured bacterium clone A06 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A06 putative proteorhodopsin gene, partial cds EU683475 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_surface_water_[2m] China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCGGCGTTTTTCTTCCTATCCATGAACTCTTTTGACAGTAAATGGAGAACCTCCATTTTGGTATCAGGTTTAATTACCTTTATCGCTGCGGTACATTATTGGTACATGAGAGACTACTGGGCAAGTGGAAATGGTTCACCAACCTTTTTCCGATATGTCGATTGGATTTTGACTGTTCCACTAATGTGTGTAGAGTTTTACCTTATTCTTAAAGCAGCTGGAGCCACAAAATCATTAATGTGGAAACTAATTCTATTATCAACAGTAATGCTTGTTACTGGTTACTTTGGTGAA AMMAASAFFFLSMNSFDSKWRTSILVSGLITFIAAVHYWYMRDYWASGNGSPTFFRYVDWILTVPLMCVEFYLILKAAGATKSLMWKLILLSTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCGGCGTTTTTCTTCCTATCCATGAACTCTTTTGACAGTAAATGGAGAACCTCCATTTTGGTATCAGGTTTAATTACCTTTATCGCTGCGGTACATTATTGGTACATGAGAGACTACTGGGCA---------------------------------------------------AGTGGAAATGGTTCACCAACCTTTTTCCGATATGTCGATTGG------------------------ATTTTGACTGTTCCACTAATGTGTGTAGAGTTTTACCTTATTCTTAAAGCA---------GCT------GGAGCCACAAAA---TCATTA------------------------------------ATGTGGAAA---CTAATTCTATTATCAACAGTAATGCTTGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDSKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------SGNGSPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GATK-SL------------MWK-LILLSTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_EU683498 [II-CFB-Polaribacter] A16014_env_samples_EU683498 gi|187711469|gb|EU683498| Uncultured bacterium clone A16014 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A16014 putative proteorhodopsin gene, partial cds EU683498 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_60m_depth China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCGTTTTTCTTCCTATCCATGAACTCTTTTGACAGTAAATGGAGAACCTCCATTTTGGTATCAGGTTTAATTACCTTTATCGCTGCGGTACATTATTGGTACATGAGAGACTACTGGGCAAGTGGAAATGGTTCACCAACCTTTTTCCGATATGTCGATTGGATTTTGACTGTTCCACTAATGTGTGTAGAGTTTTACCTTATTCTTAAAGCAGCTGGAGCCACAAAATCATTAATGTGGAAACTAATTCTATTATCAACAGTAATGCTTGTTACTGGTTACATTGGTGAA AMMAASAFFFLSMNSFDSKWRTSILVSGLITFIAAVHYWYMRDYWASGNGSPTFFRYVDWILTVPLMCVEFYLILKAAGATKSLMWKLILLSTVMLVTGYIGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCGTTTTTCTTCCTATCCATGAACTCTTTTGACAGTAAATGGAGAACCTCCATTTTGGTATCAGGTTTAATTACCTTTATCGCTGCGGTACATTATTGGTACATGAGAGACTACTGGGCA---------------------------------------------------AGTGGAAATGGTTCACCAACCTTTTTCCGATATGTCGATTGG------------------------ATTTTGACTGTTCCACTAATGTGTGTAGAGTTTTACCTTATTCTTAAAGCA---------GCT------GGAGCCACAAAA---TCATTA------------------------------------ATGTGGAAA---CTAATTCTATTATCAACAGTAATGCTTGTTACTGGTTACATTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDSKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------SGNGSPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GATK-SL------------MWK-LILLSTVMLVTGYIGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_EU683491 [II-CFB-Polaribacter] A1603_env_samples_EU683491 gi|187711455|gb|EU683491| Uncultured bacterium clone A1603 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A1603 putative proteorhodopsin gene, partial cds EU683491 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_60m_depth China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCTGCATCAGCGTTTTTCTTCCTATCCATGAACTCTTTTGACAGTAAATGGAGAACCTCCATTTTGGTATCAGGTTTAATTACCTTTATCGCTGCGGTACATTATTGGTATATGAGAGACTACTGGGCAAGTGGAAATGGTTCACCAACCTTTTTCCGATATGTCGATTGGATTTTGACTGTTCCACTAATGTGTGTAGAGTTTTACCTTATTCTTAAAGCAGCTGGAGCCACAAAATCATTAATGTGGAAACTAATTCTATTATCAACAGTAATGCTTGTTACTGGATACATTGGTGAA AMMAASAFFFLSMNSFDSKWRTSILVSGLITFIAAVHYWYMRDYWASGNGSPTFFRYVDWILTVPLMCVEFYLILKAAGATKSLMWKLILLSTVMLVTGYIGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCTGCATCAGCGTTTTTCTTCCTATCCATGAACTCTTTTGACAGTAAATGGAGAACCTCCATTTTGGTATCAGGTTTAATTACCTTTATCGCTGCGGTACATTATTGGTATATGAGAGACTACTGGGCA---------------------------------------------------AGTGGAAATGGTTCACCAACCTTTTTCCGATATGTCGATTGG------------------------ATTTTGACTGTTCCACTAATGTGTGTAGAGTTTTACCTTATTCTTAAAGCA---------GCT------GGAGCCACAAAA---TCATTA------------------------------------ATGTGGAAA---CTAATTCTATTATCAACAGTAATGCTTGTTACTGGATACATTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDSKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------SGNGSPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GATK-SL------------MWK-LILLSTVMLVTGYIGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_EU683503 [II-CFB-Polaribacter] A110014_env_samples_EU683503 gi|187711479|gb|EU683503| Uncultured bacterium clone A110014 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A110014 putative proteorhodopsin gene, partial cds EU683503 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_100m_depth China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCGTTTTTCTTCCTATCTATGAACTCTTTTGACAGCAAATGGAGAACATCCATTTTGGTATCAGGTTTAATTACCTTTATCGCTGCGGTTCATTATTGGTACATGAGAGACTACTGGGCAAGTGGAAATGGTTCACCAACCTTTTTCCGATATGTCGATTGGATTTTGACTGTTCCACTAATGTGTGTAGAGTTTTATCTTATTCTTAAAGCAGCTGGAACCACTAAATCATTAATGTGGAAATTAATTCTGTTATCAACAGTAATGCTTGTAACTGGATACTTTGGTGAA AMMAASAFFFLSMNSFDSKWRTSILVSGLITFIAAVHYWYMRDYWASGNGSPTFFRYVDWILTVPLMCVEFYLILKAAGTTKSLMWKLILLSTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCGTTTTTCTTCCTATCTATGAACTCTTTTGACAGCAAATGGAGAACATCCATTTTGGTATCAGGTTTAATTACCTTTATCGCTGCGGTTCATTATTGGTACATGAGAGACTACTGGGCA---------------------------------------------------AGTGGAAATGGTTCACCAACCTTTTTCCGATATGTCGATTGG------------------------ATTTTGACTGTTCCACTAATGTGTGTAGAGTTTTATCTTATTCTTAAAGCA---------GCT------GGAACCACTAAA---TCATTA------------------------------------ATGTGGAAA---TTAATTCTGTTATCAACAGTAATGCTTGTAACTGGATACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDSKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------SGNGSPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GTTK-SL------------MWK-LILLSTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_EU683512 [II-CFB-Polaribacter] A11009_env_samples_EU683512 gi|187711497|gb|EU683512| Uncultured bacterium clone A11009 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A11009 putative proteorhodopsin gene, partial cds EU683512 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_100m_depth China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCGTTTTTCTTCCTATCTATGAACTCTTTTGACAGCAAATGGAGAACCTCCATTTTGGTATCAGGTTTAATTACCTTTATCGCTGCGGTTCATTATTGGTACATGAGAGACTACTGGGCAAGTGGAAATGGTTCACCAACCTTTTTCCGATATGTCGATTGGATTTTGACTGTTCCACTAATGTGTGTAGAGTTTTACCTTATTCTTAAAGCAGCTGGAGCCACTAAATCATTAATGTGGAAATTAATTCTGTTATCAACAGTAATGCTTGTTACTGGTACTTTGGTGAAG AMMAASAFFFLSMNSFDSKWRTSILVSGLITFIAAVHYWYMRDYWASGNGSPTFFRYVDWILTVPLMCVEFYLILKAAGATKSLMWKLILLSTVMLVTGTLVK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCGTTTTTCTTCCTATCTATGAACTCTTTTGACAGCAAATGGAGAACCTCCATTTTGGTATCAGGTTTAATTACCTTTATCGCTGCGGTTCATTATTGGTACATGAGAGACTACTGGGCA---------------------------------------------------AGTGGAAATGGTTCACCAACCTTTTTCCGATATGTCGATTGG------------------------ATTTTGACTGTTCCACTAATGTGTGTAGAGTTTTACCTTATTCTTAAAGCA---------GCT------GGAGCCACTAAA---TCATTA------------------------------------ATGTGGAAA---TTAATTCTGTTATCAACAGTAATGCTTGTTACTGGTACTTTGGTGAAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDSKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------SGNGSPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GATK-SL------------MWK-LILLSTVMLVTGTLVK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_EU683472 [II-CFB-Polaribacter] A02_02_env_samples_EU683472 gi|187711417|gb|EU683472| Uncultured bacterium clone A02 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A02 putative proteorhodopsin gene, partial cds EU683472 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_surface_water_[2m] China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCGTTTTTCTTCTTATCAATGAACTCTTTTGATTCTAAATGGAGAACATCTATTTTAGTTTCTGGGCTAATTACTTTTATTGCCGCTGTTCACTATTGGTATATGAGAGACTACTGGGCAAGTGGAAATGGTTCACCAACCTTTTTCCGATATGTCGATTGGATTTTGACTGTTCCACTAATGTGTGTAGAGTTTTACCTTATTCTTAAAGCAGCTGGAGCCACAAAATCATTAATGTGGAAACTAATTCTATTATCAACAGTAATGCTTGTTACTGGTTACTTTGGTGAA AMMAASAFFFLSMNSFDSKWRTSILVSGLITFIAAVHYWYMRDYWASGNGSPTFFRYVDWILTVPLMCVEFYLILKAAGATKSLMWKLILLSTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCGTTTTTCTTCTTATCAATGAACTCTTTTGATTCTAAATGGAGAACATCTATTTTAGTTTCTGGGCTAATTACTTTTATTGCCGCTGTTCACTATTGGTATATGAGAGACTACTGGGCA---------------------------------------------------AGTGGAAATGGTTCACCAACCTTTTTCCGATATGTCGATTGG------------------------ATTTTGACTGTTCCACTAATGTGTGTAGAGTTTTACCTTATTCTTAAAGCA---------GCT------GGAGCCACAAAA---TCATTA------------------------------------ATGTGGAAA---CTAATTCTATTATCAACAGTAATGCTTGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDSKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------SGNGSPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GATK-SL------------MWK-LILLSTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_EU683474 [II-CFB-Polaribacter] A04_02_env_samples_EU683474 gi|187711421|gb|EU683474| Uncultured bacterium clone A04 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A04 putative proteorhodopsin gene, partial cds EU683474 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_surface_water_[2m] China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCCTTTTTCTTCCTGTCAATGACTTCTTTTGACAGTAAATGGAGAACCTCTATTTTGGTATCAGGTTTGATTACCTTTATCGCTGCTGTACATTATTGGTACATGAGAGACTATTGGGCTAGTGGAAATGGTTCTCCAACCTTCTTCCGTTATGTCGACTGGATTTTGACAGTCCCTTTAATGTGTGTTGAGTTTTATTTAATTTTAAAAGCAGCTGGTGCAACTAAGCAATTAATGTGGAAACTAATTCTGTTATCTACTGTAATGTTAGTTACTGGTTACATTGGTGAA AMMAASAFFFLSMTSFDSKWRTSILVSGLITFIAAVHYWYMRDYWASGNGSPTFFRYVDWILTVPLMCVEFYLILKAAGATKQLMWKLILLSTVMLVTGYIGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCCTTTTTCTTCCTGTCAATGACTTCTTTTGACAGTAAATGGAGAACCTCTATTTTGGTATCAGGTTTGATTACCTTTATCGCTGCTGTACATTATTGGTACATGAGAGACTATTGGGCT---------------------------------------------------AGTGGAAATGGTTCTCCAACCTTCTTCCGTTATGTCGACTGG------------------------ATTTTGACAGTCCCTTTAATGTGTGTTGAGTTTTATTTAATTTTAAAAGCA---------GCT------GGTGCAACTAAG---CAATTA------------------------------------ATGTGGAAA---CTAATTCTGTTATCTACTGTAATGTTAGTTACTGGTTACATTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMTSFDSKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------SGNGSPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GATK-QL------------MWK-LILLSTVMLVTGYIGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_EU683495 [II-CFB-Polaribacter] A1601_env_samples_EU683495 gi|187711463|gb|EU683495| Uncultured bacterium clone A1601 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A1601 putative proteorhodopsin gene, partial cds EU683495 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_60m_depth China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCCTTTTTCTTCCTGTCAATGACTTCTTTTGACAGTAAATGGAGAACCTCTATTTTGGTATCAGGTTTGATTACCTTTATCGCTGCTGTACATTATTGGTACATGAGAGACTATTGGGCTAGTGGAAATGGTTCTCCAACCTTCTTCCGTTATGTCGACTGGATTTTGACAGTCCCTTTAATGTGTGTTGAGTTTTATTTAATTTTAAAAGCAGCTGGTGCAACTAAGCAATTAATGTGGAAACTAATTCTGTTATCTACTGTAATGTTAGTTACTGGATACTTTGGTGAA AMMAASAFFFLSMTSFDSKWRTSILVSGLITFIAAVHYWYMRDYWASGNGSPTFFRYVDWILTVPLMCVEFYLILKAAGATKQLMWKLILLSTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCCTTTTTCTTCCTGTCAATGACTTCTTTTGACAGTAAATGGAGAACCTCTATTTTGGTATCAGGTTTGATTACCTTTATCGCTGCTGTACATTATTGGTACATGAGAGACTATTGGGCT---------------------------------------------------AGTGGAAATGGTTCTCCAACCTTCTTCCGTTATGTCGACTGG------------------------ATTTTGACAGTCCCTTTAATGTGTGTTGAGTTTTATTTAATTTTAAAAGCA---------GCT------GGTGCAACTAAG---CAATTA------------------------------------ATGTGGAAA---CTAATTCTGTTATCTACTGTAATGTTAGTTACTGGATACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMTSFDSKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------SGNGSPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GATK-QL------------MWK-LILLSTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_EU683509 [II-CFB-Polaribacter] A11005_env_samples_EU683509 gi|187711491|gb|EU683509| Uncultured bacterium clone A11005 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A11005 putative proteorhodopsin gene, partial cds EU683509 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_100m_depth China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCCTTTTTCTTCCTGTCAATGACTTCTTTTGACAGTAAATGGAGAACCTCTATTTTGGTATCAGGTTTGATTACCTTTATCGCTGCTGTACATTATTGGTACATGAGAGACTATTGGGCTAGTGGAAATGGTTCTCCAACCTTCTTCCGTTATGTCGACTGGATTTTGACAGTTCCTTTAATGTGTGTTGAGTTTTATTTAATTTTAAAAGCAGCTGGTGCAACTAAGCAATTAATGTGGAAACTAATTCTGTTATCTACTGTAATGTTAGTTACTGGATACTTTGGTGAA AMMAASAFFFLSMTSFDSKWRTSILVSGLITFIAAVHYWYMRDYWASGNGSPTFFRYVDWILTVPLMCVEFYLILKAAGATKQLMWKLILLSTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCCTTTTTCTTCCTGTCAATGACTTCTTTTGACAGTAAATGGAGAACCTCTATTTTGGTATCAGGTTTGATTACCTTTATCGCTGCTGTACATTATTGGTACATGAGAGACTATTGGGCT---------------------------------------------------AGTGGAAATGGTTCTCCAACCTTCTTCCGTTATGTCGACTGG------------------------ATTTTGACAGTTCCTTTAATGTGTGTTGAGTTTTATTTAATTTTAAAAGCA---------GCT------GGTGCAACTAAG---CAATTA------------------------------------ATGTGGAAA---CTAATTCTGTTATCTACTGTAATGTTAGTTACTGGATACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMTSFDSKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------SGNGSPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GATK-QL------------MWK-LILLSTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_EU683490 [II-CFB-Polaribacter] A1602_env_samples_EU683490 gi|187711453|gb|EU683490| Uncultured bacterium clone A1602 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A1602 putative proteorhodopsin gene, partial cds EU683490 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_60m_depth China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCCTTTTTCTTCCTGTCAATGACTTCTTTTGACAGTAAATGGAGAACCTCTATTTTGGTATCAGGTTTGATTACCTTTATCGCTGCTGTACATTATTGGTACATGAGAGACTATTGGGCTAGTGGAAATGGTTCTCCAACCTTCTTCCGTTATGTCGACTGGATTTTGACAGTTCCTTTAATGTGTGTTGAGTTTTATTTAATTTTAAAAGCAGCTGGTGCAACTAAGCAATTAATGTGGAAACTAATTCTTTTATCTACTGTAATGTTAGTTACTGGTTACTTGGTGAAG AMMAASAFFFLSMTSFDSKWRTSILVSGLITFIAAVHYWYMRDYWASGNGSPTFFRYVDWILTVPLMCVEFYLILKAAGATKQLMWKLILLSTVMLVTGYLVK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCCTTTTTCTTCCTGTCAATGACTTCTTTTGACAGTAAATGGAGAACCTCTATTTTGGTATCAGGTTTGATTACCTTTATCGCTGCTGTACATTATTGGTACATGAGAGACTATTGGGCT---------------------------------------------------AGTGGAAATGGTTCTCCAACCTTCTTCCGTTATGTCGACTGG------------------------ATTTTGACAGTTCCTTTAATGTGTGTTGAGTTTTATTTAATTTTAAAAGCA---------GCT------GGTGCAACTAAG---CAATTA------------------------------------ATGTGGAAA---CTAATTCTTTTATCTACTGTAATGTTAGTTACTGGTTACTTGGTGAAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMTSFDSKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------SGNGSPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GATK-QL------------MWK-LILLSTVMLVTGYLVK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_EU683478 [II-CFB-Polaribacter] A109_02_env_samples_EU683478 gi|187711429|gb|EU683478| Uncultured bacterium clone A109 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A109 putative proteorhodopsin gene, partial cds EU683478 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_surface_water_[2m] China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCCTTTTTCTTCCTGTCAATGACTTCTTTTGACAGTAAATGGAGAACCTCTATTTTGGTATCAGGTTTGATTACCTTCATCGCTGCTGTACATTATTGGTACATGAGAGACTATTGGGCTAGTGGAAATGGTTCTCCAACCTTCTTCCGTTATGTCGACTGGATTTTGACAGTTCCTTTAATGTGTGTTGAGTTTTATTTAATTTTAAAAGCAGCTGGTGCAACTAAGCAGTTAATGTGGAAACTAATTCTGTTATCTACTGTAATGTTAGTTACTGGTTACTTTGGTGAA AMMAASAFFFLSMTSFDSKWRTSILVSGLITFIAAVHYWYMRDYWASGNGSPTFFRYVDWILTVPLMCVEFYLILKAAGATKQLMWKLILLSTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCCTTTTTCTTCCTGTCAATGACTTCTTTTGACAGTAAATGGAGAACCTCTATTTTGGTATCAGGTTTGATTACCTTCATCGCTGCTGTACATTATTGGTACATGAGAGACTATTGGGCT---------------------------------------------------AGTGGAAATGGTTCTCCAACCTTCTTCCGTTATGTCGACTGG------------------------ATTTTGACAGTTCCTTTAATGTGTGTTGAGTTTTATTTAATTTTAAAAGCA---------GCT------GGTGCAACTAAG---CAGTTA------------------------------------ATGTGGAAA---CTAATTCTGTTATCTACTGTAATGTTAGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMTSFDSKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------SGNGSPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GATK-QL------------MWK-LILLSTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_EU683502 [II-CFB-Polaribacter] A110045_env_samples_EU683502 gi|187711477|gb|EU683502| Uncultured bacterium clone A110045 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A110045 putative proteorhodopsin gene, partial cds EU683502 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_100m_depth China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCCTTTTTCTTCCTGTCAATGACTTCTTTTGACAGTAAATGGAGAACCTCTATTTTGGTATCAGGTTTGATTACCTTCATCGCTGCTGTACATTATTGGTACATGAGAGACTATTGGGCTAGTGGAAATGGTTCTCCAACCTTCTTCCGTTATGTCGACTGGATTTTGACAGTTCCTTTAATGTGTGTTGAGTTTTATTTAATTTTAAAAGCAGCTGGTGCAACTAAGCAGTTAATGTGGAAACTAATTCTGTTATCTACTGTAATGTTAGTTACTGGATACTTTGGTGAA AMMAASAFFFLSMTSFDSKWRTSILVSGLITFIAAVHYWYMRDYWASGNGSPTFFRYVDWILTVPLMCVEFYLILKAAGATKQLMWKLILLSTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCCTTTTTCTTCCTGTCAATGACTTCTTTTGACAGTAAATGGAGAACCTCTATTTTGGTATCAGGTTTGATTACCTTCATCGCTGCTGTACATTATTGGTACATGAGAGACTATTGGGCT---------------------------------------------------AGTGGAAATGGTTCTCCAACCTTCTTCCGTTATGTCGACTGG------------------------ATTTTGACAGTTCCTTTAATGTGTGTTGAGTTTTATTTAATTTTAAAAGCA---------GCT------GGTGCAACTAAG---CAGTTA------------------------------------ATGTGGAAA---CTAATTCTGTTATCTACTGTAATGTTAGTTACTGGATACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMTSFDSKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------SGNGSPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GATK-QL------------MWK-LILLSTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_EU683510 [II-CFB-Polaribacter] A11007_env_samples_EU683510 gi|187711493|gb|EU683510| Uncultured bacterium clone A11007 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A11007 putative proteorhodopsin gene, partial cds EU683510 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_100m_depth China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCTGCATCAGCCTTTTTCTTCCTGTCAATGACTTCTTTTGACAGTAAATGGAGAACCTCTATTTTGGTATCAGGTTTGATTACCTTCATCGCTGCTGTACATTATTGGTACATGAGAGACTATTGGGCTAGTGGAAATGGTTCTCCAACCTTCTTCCGTTATGTCGACTGGATTTTGACAGTTCCTTTAATGTGTGTTGAGTTTTATTTAATTTTAAAAGCAGCTGGTGCAACTAAGCAGTTAATGTGGAAACTAATTCTGTTATCTACTGTAATGTTAGTAACTGGTTACTTTGGTGAA AMMAASAFFFLSMTSFDSKWRTSILVSGLITFIAAVHYWYMRDYWASGNGSPTFFRYVDWILTVPLMCVEFYLILKAAGATKQLMWKLILLSTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCTGCATCAGCCTTTTTCTTCCTGTCAATGACTTCTTTTGACAGTAAATGGAGAACCTCTATTTTGGTATCAGGTTTGATTACCTTCATCGCTGCTGTACATTATTGGTACATGAGAGACTATTGGGCT---------------------------------------------------AGTGGAAATGGTTCTCCAACCTTCTTCCGTTATGTCGACTGG------------------------ATTTTGACAGTTCCTTTAATGTGTGTTGAGTTTTATTTAATTTTAAAAGCA---------GCT------GGTGCAACTAAG---CAGTTA------------------------------------ATGTGGAAA---CTAATTCTGTTATCTACTGTAATGTTAGTAACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMTSFDSKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------SGNGSPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GATK-QL------------MWK-LILLSTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_EU683517 [II-CFB-Polaribacter] A12008_env_samples_EU683517 gi|187711507|gb|EU683517| Uncultured bacterium clone A12008 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A12008 putative proteorhodopsin gene, partial cds EU683517 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_200m_depth China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCGTTTTTCTTCCTATCTATGAACTCTTTTGACAGCAAATGGAGAACCTCCATTTTGGTATCGGGTTTAATTACCTTTATCGCTGCAGTACACTATTGGTACATGAGAGACTATTGGGCTAGTGGAAATGGTTCACCAACATTTTTCCGTTATGTTGATTGGATTCTTACAGTCCCTTTGATGTGCGTTGAGTTTTATCTTATTTTAAAAGCAGCCGGTGCAAGTAAGCAACTTATGTGGAAACTAATTCTACTATCAACTGTAATGCTTGTTACTGGTTACTTTGGTGAA AMMAASAFFFLSMNSFDSKWRTSILVSGLITFIAAVHYWYMRDYWASGNGSPTFFRYVDWILTVPLMCVEFYLILKAAGASKQLMWKLILLSTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCGTTTTTCTTCCTATCTATGAACTCTTTTGACAGCAAATGGAGAACCTCCATTTTGGTATCGGGTTTAATTACCTTTATCGCTGCAGTACACTATTGGTACATGAGAGACTATTGGGCT---------------------------------------------------AGTGGAAATGGTTCACCAACATTTTTCCGTTATGTTGATTGG------------------------ATTCTTACAGTCCCTTTGATGTGCGTTGAGTTTTATCTTATTTTAAAAGCA---------GCC------GGTGCAAGTAAG---CAACTT------------------------------------ATGTGGAAA---CTAATTCTACTATCAACTGTAATGCTTGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDSKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------SGNGSPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GASK-QL------------MWK-LILLSTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_EU683486 [II-CFB-Polaribacter] A1011_3_env_samples_EU683486 gi|187711445|gb|EU683486| Uncultured bacterium clone A1011 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A1011 putative proteorhodopsin gene, partial cds EU683486 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_surface_water_[2m] China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCGTTCTTCTTCCTTTCCATGAATTCTTTCGATAACAAGTGGAGAACTTCTATCTTGGTATCAGGACTCATTACTTTTATCGCAGCGGTACACTACTGGTACATGAGAGATTACTGGGCAACAAATGCGGAGTCTCCAACATTCTTCCGTTATGTTGACTGGGTATTGACAGTACCATTAATGTGTGTTGAATTCTACCTTATTCTTAAAGCTGCTGGTGCGGCCAAAGCTATGATGTGGAGATTAATCTTCTTATCTGTAGTTATGCTTGTTACTGGTTACTTTGGTGAA AMMAASAFFFLSMNSFDNKWRTSILVSGLITFIAAVHYWYMRDYWATNAESPTFFRYVDWVLTVPLMCVEFYLILKAAGAAKAMMWRLIFLSVVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCGTTCTTCTTCCTTTCCATGAATTCTTTCGATAACAAGTGGAGAACTTCTATCTTGGTATCAGGACTCATTACTTTTATCGCAGCGGTACACTACTGGTACATGAGAGATTACTGGGCA---------------------------------------------------ACAAATGCGGAGTCTCCAACATTCTTCCGTTATGTTGACTGG------------------------GTATTGACAGTACCATTAATGTGTGTTGAATTCTACCTTATTCTTAAAGCT---------GCT------GGTGCGGCCAAA---GCTATG------------------------------------ATGTGGAGA---TTAATCTTCTTATCTGTAGTTATGCTTGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDNKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------TNAESPTFFRYVDW--------VLTVPLMCVEFYLILKA---A--GAAK-AM------------MWR-LIFLSVVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_EU683488 [II-CFB-Polaribacter] A1023_3_env_samples_EU683488 gi|187711449|gb|EU683488| Uncultured bacterium clone A1023 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A1023 putative proteorhodopsin gene, partial cds EU683488 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_surface_water_[2m] China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCGTTCTTCTTCCTTTCCATGAATTCTTTCGATAACAAGTGGAGAACTTCTATCTTGGTATCAGGACTCATTACTTTTATCGCAGCGGTACACTACTGGTACATGAGAGATTACTGGGCAACAAATGCGGAGTCTCCAACATTCTTCCGTTATGTTGACTGGGTATTGACAGTACCATTAATGTGTGTTGAATTCTACCTTATTCTTAAAGCTGCTGGTGCGGCCAAAGCTATGATGTGGAGATTAATCTTCTTATCTGTAGTTATGCTTGTAACTGGTTACTTTGGTGAA AMMAASAFFFLSMNSFDNKWRTSILVSGLITFIAAVHYWYMRDYWATNAESPTFFRYVDWVLTVPLMCVEFYLILKAAGAAKAMMWRLIFLSVVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCGTTCTTCTTCCTTTCCATGAATTCTTTCGATAACAAGTGGAGAACTTCTATCTTGGTATCAGGACTCATTACTTTTATCGCAGCGGTACACTACTGGTACATGAGAGATTACTGGGCA---------------------------------------------------ACAAATGCGGAGTCTCCAACATTCTTCCGTTATGTTGACTGG------------------------GTATTGACAGTACCATTAATGTGTGTTGAATTCTACCTTATTCTTAAAGCT---------GCT------GGTGCGGCCAAA---GCTATG------------------------------------ATGTGGAGA---TTAATCTTCTTATCTGTAGTTATGCTTGTAACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDNKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------TNAESPTFFRYVDW--------VLTVPLMCVEFYLILKA---A--GAAK-AM------------MWR-LIFLSVVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_EU683507 [II-CFB-Polaribacter] A11002_env_samples_EU683507 gi|187711487|gb|EU683507| Uncultured bacterium clone A11002 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A11002 putative proteorhodopsin gene, partial cds EU683507 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_100m_depth China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCGTTCTTCTTCCTTTCCATGAATTCTTTCGATAACAAGTGGAGAACTTCTATCTTGGTATCAGGACTCATTACTTTTATCGCAGCGGTACACTACTGGTACATGAGAGATTACTGGGCAACAAATGCGGAGTCTCCAACATTCTTCCGTTATGTTGACTGGGTATTGACAGTACCATTAATGTGTGTTGAATTCTACCTTATTCTTAAAGCTGCTGGTGCAGCCAAAGCTATGATGTGGAGATTAATCTTCTTATCTGTAGTTATGCTTGTTACTGGTTACTTTGGTGAA AMMAASAFFFLSMNSFDNKWRTSILVSGLITFIAAVHYWYMRDYWATNAESPTFFRYVDWVLTVPLMCVEFYLILKAAGAAKAMMWRLIFLSVVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCGTTCTTCTTCCTTTCCATGAATTCTTTCGATAACAAGTGGAGAACTTCTATCTTGGTATCAGGACTCATTACTTTTATCGCAGCGGTACACTACTGGTACATGAGAGATTACTGGGCA---------------------------------------------------ACAAATGCGGAGTCTCCAACATTCTTCCGTTATGTTGACTGG------------------------GTATTGACAGTACCATTAATGTGTGTTGAATTCTACCTTATTCTTAAAGCT---------GCT------GGTGCAGCCAAA---GCTATG------------------------------------ATGTGGAGA---TTAATCTTCTTATCTGTAGTTATGCTTGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDNKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------TNAESPTFFRYVDW--------VLTVPLMCVEFYLILKA---A--GAAK-AM------------MWR-LIFLSVVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_EU683500 [II-CFB-Polaribacter] A110047_env_samples_EU683500 gi|187711473|gb|EU683500| Uncultured bacterium clone A110047 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A110047 putative proteorhodopsin gene, partial cds EU683500 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_100m_depth China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCGTTCTTCTTCCTTTCCATGAATTCTTTCGATAACAAGTGGAGAACTTCTATCTTGGTATCAGGACTCATTACTTTTATCGCAGCGGTACACTACTGGTACATGAGAGATTACTGGGCAACAAATGCGGAGTCTCCAACATTCTTCCGTTATGTTGACTGGGTATTGACAGTACCATTAATGTGTGTTGAATTCTACCTTATTCTTAAAGCTGCTGGTGCGGCCAAAGCTATGATGTGGAGATTAATCTTCTTATCTGTAGTTATGCTTGTTACTGGTTACTTTGGTGAA AMMAASAFFFLSMNSFDNKWRTSILVSGLITFIAAVHYWYMRDYWATNAESPTFFRYVDWVLTVPLMCVEFYLILKAAGAAKAMMWRLIFLSVVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCGTTCTTCTTCCTTTCCATGAATTCTTTCGATAACAAGTGGAGAACTTCTATCTTGGTATCAGGACTCATTACTTTTATCGCAGCGGTACACTACTGGTACATGAGAGATTACTGGGCA---------------------------------------------------ACAAATGCGGAGTCTCCAACATTCTTCCGTTATGTTGACTGG------------------------GTATTGACAGTACCATTAATGTGTGTTGAATTCTACCTTATTCTTAAAGCT---------GCT------GGTGCGGCCAAA---GCTATG------------------------------------ATGTGGAGA---TTAATCTTCTTATCTGTAGTTATGCTTGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDNKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------TNAESPTFFRYVDW--------VLTVPLMCVEFYLILKA---A--GAAK-AM------------MWR-LIFLSVVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_EU683485 [II-CFB-Polaribacter] A108_3_env_samples_EU683485 gi|187711443|gb|EU683485| Uncultured bacterium clone A108 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A108 putative proteorhodopsin gene, partial cds EU683485 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_surface_water_[2m] China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCGTTCTTCTTCCTTTCCATGAATTCTTTCGATAACAAGTGGAGAACTTCTATCTTGGTATCAGGACTCATTACTTTTATCGCAGCGGTACACTACTGGTACATGAGAGATTACTGGGCAACAAATGCGGAGTCTCCAACATTCTTCCGTTATGTTGACTGGGTATTGACAGTACCATTAATGTGTGTTGAATTCTACCTTATTCTTAAAGCTGCTGGTGCGGCCAAAGCTATGATGTGGAGATTAATCTTCTTATCTGTAGTTATGCTTGTTACTGGTTACTTTGGTGAA AMMAASAFFFLSMNSFDNKWRTSILVSGLITFIAAVHYWYMRDYWATNAESPTFFRYVDWVLTVPLMCVEFYLILKAAGAAKAMMWRLIFLSVVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCGTTCTTCTTCCTTTCCATGAATTCTTTCGATAACAAGTGGAGAACTTCTATCTTGGTATCAGGACTCATTACTTTTATCGCAGCGGTACACTACTGGTACATGAGAGATTACTGGGCA---------------------------------------------------ACAAATGCGGAGTCTCCAACATTCTTCCGTTATGTTGACTGG------------------------GTATTGACAGTACCATTAATGTGTGTTGAATTCTACCTTATTCTTAAAGCT---------GCT------GGTGCGGCCAAA---GCTATG------------------------------------ATGTGGAGA---TTAATCTTCTTATCTGTAGTTATGCTTGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDNKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------TNAESPTFFRYVDW--------VLTVPLMCVEFYLILKA---A--GAAK-AM------------MWR-LIFLSVVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_EU683524 [II-CFB-Polaribacter] A120011_env_samples_EU683524 gi|187711521|gb|EU683524| Uncultured bacterium clone A120011 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A120011 putative proteorhodopsin gene, partial cds EU683524 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_200m_depth China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCGTTCTTCTTCCTTTCCATGAATTCTTTCGATAACAAGTGGAGAACTTCTATCTTGGTATCAGGACTCATTACTTTTATCGCAGCGGTACACTACTGGTACATGAGAGATTACTGGGCAACAAATGCGGAGTCTCCAACATTCTTCCGTTATGTTGACTGGGTATTGACAGTACCATTAATGTGTGTTGAATTCTACCTTATTCTTAAAGCTGCTGGTGCGGCCAAAGCTATGATGTGGAGATTAATCTTCTTATCTGTAGTTATGCTTGTTACTGGTTATTTTGGTGAA AMMAASAFFFLSMNSFDNKWRTSILVSGLITFIAAVHYWYMRDYWATNAESPTFFRYVDWVLTVPLMCVEFYLILKAAGAAKAMMWRLIFLSVVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCGTTCTTCTTCCTTTCCATGAATTCTTTCGATAACAAGTGGAGAACTTCTATCTTGGTATCAGGACTCATTACTTTTATCGCAGCGGTACACTACTGGTACATGAGAGATTACTGGGCA---------------------------------------------------ACAAATGCGGAGTCTCCAACATTCTTCCGTTATGTTGACTGG------------------------GTATTGACAGTACCATTAATGTGTGTTGAATTCTACCTTATTCTTAAAGCT---------GCT------GGTGCGGCCAAA---GCTATG------------------------------------ATGTGGAGA---TTAATCTTCTTATCTGTAGTTATGCTTGTTACTGGTTATTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDNKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------TNAESPTFFRYVDW--------VLTVPLMCVEFYLILKA---A--GAAK-AM------------MWR-LIFLSVVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_EU683483 [II-CFB-Polaribacter] A106_3_env_samples_EU683483 gi|187711439|gb|EU683483| Uncultured bacterium clone A106 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A106 putative proteorhodopsin gene, partial cds EU683483 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_surface_water_[2m] China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCGTTCTTCTTCCTTTCCATGAATTCTTTCGATAACAAGTGGAGAACTTCTATCTTGGTATCAGGACTCATTACTTTTATCGCAGCGGTACACTACTGGTACATGAGAGATTACTGGGCAACAAATGCGGAGTCTCCAACATTCTTCCGTTATGTTGACTGGGTATTGACAGTACCATTAATGTGTGTTGAATTCTACCTTATTCTTAAAGCTGCTGGTGCGGCCAAAGCTATGATGTGGAGATTAATCTTCTTATCTGTAGTTATGCTTGTTACTGGTTACTTTGGTGAA AMMAASAFFFLSMNSFDNKWRTSILVSGLITFIAAVHYWYMRDYWATNAESPTFFRYVDWVLTVPLMCVEFYLILKAAGAAKAMMWRLIFLSVVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCGTTCTTCTTCCTTTCCATGAATTCTTTCGATAACAAGTGGAGAACTTCTATCTTGGTATCAGGACTCATTACTTTTATCGCAGCGGTACACTACTGGTACATGAGAGATTACTGGGCA---------------------------------------------------ACAAATGCGGAGTCTCCAACATTCTTCCGTTATGTTGACTGG------------------------GTATTGACAGTACCATTAATGTGTGTTGAATTCTACCTTATTCTTAAAGCT---------GCT------GGTGCGGCCAAA---GCTATG------------------------------------ATGTGGAGA---TTAATCTTCTTATCTGTAGTTATGCTTGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDNKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------TNAESPTFFRYVDW--------VLTVPLMCVEFYLILKA---A--GAAK-AM------------MWR-LIFLSVVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_EU683484 [II-CFB-Polaribacter] A102_3_env_samples_EU683484 gi|187711441|gb|EU683484| Uncultured bacterium clone A102 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A102 putative proteorhodopsin gene, partial cds EU683484 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_surface_water_[2m] China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACTTCCATTTTGGTATCAGGTCTAATTACGTTCATTGCAGCAGTACACTACTGGTACATGAGAGATTACTGGGCAACAAATGCGGAGTCTCCAACATTCTTCCGTTATGTTGACTGGGTATTGACAGTACCATTAATGTGTGTTGAATTTTACCTTATTCTTAAAGCAGCTGGTGCGGCCAAACATATGATGTGGAGAATAATCTTCTTATCTGCAGTTATGCTTGTTACTGGTTACATTGGTGAA AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWATNAESPTFFRYVDWVLTVPLMCVEFYLILKAAGAAKHMMWRIIFLSAVMLVTGYIGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGATAACAAATGGAAAACTTCCATTTTGGTATCAGGTCTAATTACGTTCATTGCAGCAGTACACTACTGGTACATGAGAGATTACTGGGCA---------------------------------------------------ACAAATGCGGAGTCTCCAACATTCTTCCGTTATGTTGACTGG------------------------GTATTGACAGTACCATTAATGTGTGTTGAATTTTACCTTATTCTTAAAGCA---------GCT------GGTGCGGCCAAA---CATATG------------------------------------ATGTGGAGA---ATAATCTTCTTATCTGCAGTTATGCTTGTTACTGGTTACATTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWA-----------------TNAESPTFFRYVDW--------VLTVPLMCVEFYLILKA---A--GAAK-HM------------MWR-IIFLSAVMLVTGYIGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_EU683551 [II-CFB-Polaribacter] W16_env_samples_EU683551 gi|187711575|gb|EU683551| Uncultured bacterium clone W16 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W16 putative proteorhodopsin gene, partial cds EU683551 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_[near_Yangtzi_River_estuary]_surface_water_[2m] China Sea marine 31.3 122.2 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGACAACAAATGGAAAACTTCCATTTTAGTGTCAGGTCTAATTACGTTCATTGCAGCAGTACACTACTGGTACATGAGAGATTACTGGGCAACAAATGCGGAGTCTCCAACATTCTTCCGTTATGTTGACTGGGTATTGACAGTGCCATTAATGTGTGTTGAATTCTACCTTATTCTTAAAGCTGCTGGTGCGGCCAAAGCTATGATGTGGAGATTAATCTTCTTATCTGTAGTTATGCTTGTAACTGGTTATTTTGGTGAA AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWATNAESPTFFRYVDWVLTVPLMCVEFYLILKAAGAAKAMMWRLIFLSVVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCGTTCTTCTTTCTTTCAATGAACTCATTTGACAACAAATGGAAAACTTCCATTTTAGTGTCAGGTCTAATTACGTTCATTGCAGCAGTACACTACTGGTACATGAGAGATTACTGGGCA---------------------------------------------------ACAAATGCGGAGTCTCCAACATTCTTCCGTTATGTTGACTGG------------------------GTATTGACAGTGCCATTAATGTGTGTTGAATTCTACCTTATTCTTAAAGCT---------GCT------GGTGCGGCCAAA---GCTATG------------------------------------ATGTGGAGA---TTAATCTTCTTATCTGTAGTTATGCTTGTAACTGGTTATTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDNKWKTSILVSGLITFIAAVHYWYMRDYWA-----------------TNAESPTFFRYVDW--------VLTVPLMCVEFYLILKA---A--GAAK-AM------------MWR-LIFLSVVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_EU683536 [II-CFB-Polaribacter] A903_02_env_samples_EU683536 gi|187711545|gb|EU683536| Uncultured bacterium clone A903 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A903 putative proteorhodopsin gene, partial cds EU683536 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_surface_water_[2m] China Sea marine 22 114 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCGTTCTTCTTCCTTTCCATGAATTCTTTCGATAACAAATGGAGAACTTCTATTTTGGTATCTGGATTAATTACATTTATCGCAGCTGTACATTATTGGTACATGAGAGATTATTGGGCAACTAATGCTACCTCTCCAACCTTTTTCCGTTATGTGGACTGGGTGTTGACTGTACCATTAATGTGTGTTGAATTCTATCTTATCCTTAAAGCTGCTGGTGCAACCAAAGCAATGATGTGGAGATTAATCTTCTTGTCTGTTGTAATGCTTGTTACTGGTTACATTGGTGAA AMMAASAFFFLSMNSFDNKWRTSILVSGLITFIAAVHYWYMRDYWATNATSPTFFRYVDWVLTVPLMCVEFYLILKAAGATKAMMWRLIFLSVVMLVTGYIGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCGTTCTTCTTCCTTTCCATGAATTCTTTCGATAACAAATGGAGAACTTCTATTTTGGTATCTGGATTAATTACATTTATCGCAGCTGTACATTATTGGTACATGAGAGATTATTGGGCA---------------------------------------------------ACTAATGCTACCTCTCCAACCTTTTTCCGTTATGTGGACTGG------------------------GTGTTGACTGTACCATTAATGTGTGTTGAATTCTATCTTATCCTTAAAGCT---------GCT------GGTGCAACCAAA---GCAATG------------------------------------ATGTGGAGA---TTAATCTTCTTGTCTGTTGTAATGCTTGTTACTGGTTACATTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDNKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------TNATSPTFFRYVDW--------VLTVPLMCVEFYLILKA---A--GATK-AM------------MWR-LIFLSVVMLVTGYIGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_EU683548 [II-CFB-Polaribacter] W18_env_samples_EU683548 gi|187711569|gb|EU683548| Uncultured bacterium clone W18 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W18 putative proteorhodopsin gene, partial cds EU683548 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_[near_Yangtzi_River_estuary]_surface_water_[2m] China Sea marine 31.3 122.2 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCCTTCTTCTTCCTTTCCATGAATTCGTTCGATAACAAATGGAGAACTTCTATTTTGGTATCTGGATTAATTACATTTATCGCGGCTGTGCATTATTGGTACATGAGAGACTATTGGGCAACCAATGGAACCTCTCCTACCTTCTTCCGTTATGTGGACTGGGTACTTACTGTTCCATTAATGTGTGTGGAATTCTACCTTATTCTAAAGGCAGCTGGAGCAACTAAAGCCATGATGTGGCGCTTGATCTTCTTGTCTGTAGTGATGCTTGTTACTGGTTACTTTGGTGAA AMMAASAFFFLSMNSFDNKWRTSILVSGLITFIAAVHYWYMRDYWATNGTSPTFFRYVDWVLTVPLMCVEFYLILKAAGATKAMMWRLIFLSVVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCCTTCTTCTTCCTTTCCATGAATTCGTTCGATAACAAATGGAGAACTTCTATTTTGGTATCTGGATTAATTACATTTATCGCGGCTGTGCATTATTGGTACATGAGAGACTATTGGGCA---------------------------------------------------ACCAATGGAACCTCTCCTACCTTCTTCCGTTATGTGGACTGG------------------------GTACTTACTGTTCCATTAATGTGTGTGGAATTCTACCTTATTCTAAAGGCA---------GCT------GGAGCAACTAAA---GCCATG------------------------------------ATGTGGCGC---TTGATCTTCTTGTCTGTAGTGATGCTTGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDNKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------TNGTSPTFFRYVDW--------VLTVPLMCVEFYLILKA---A--GATK-AM------------MWR-LIFLSVVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_EU683549 [II-CFB-Polaribacter] W12_env_samples_EU683549 gi|187711571|gb|EU683549| Uncultured bacterium clone W12 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W12 putative proteorhodopsin gene, partial cds EU683549 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_[near_Yangtzi_River_estuary]_surface_water_[2m] China Sea marine 31.3 122.2 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCGTTTTTCTTCCTATCAATGGACTCATTTGACAACAAATGGAGAACCTCTATTTTGGTATCAGGTCTGATTACCTTTATCGCTGCTGTACACTATTGGTACATGAGAAACTACTGGGCAACTAATGCTACGTCTCCAACATTCTTCCGTTATGTGGACTGGGTGTTGACCGTACCGTTAATGTGTGTTGAGTTTTACCTTATTCTTAAGGCGGCTGGAGCCACAAAATCATTAATGTGGAAACTTATCTTCCTTTCTGTAATCATGTTAGTAACTGGATACATTGGTGAA AMMAASAFFFLSMDSFDNKWRTSILVSGLITFIAAVHYWYMRNYWATNATSPTFFRYVDWVLTVPLMCVEFYLILKAAGATKSLMWKLIFLSVIMLVTGYIGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCGTTTTTCTTCCTATCAATGGACTCATTTGACAACAAATGGAGAACCTCTATTTTGGTATCAGGTCTGATTACCTTTATCGCTGCTGTACACTATTGGTACATGAGAAACTACTGGGCA---------------------------------------------------ACTAATGCTACGTCTCCAACATTCTTCCGTTATGTGGACTGG------------------------GTGTTGACCGTACCGTTAATGTGTGTTGAGTTTTACCTTATTCTTAAGGCG---------GCT------GGAGCCACAAAA---TCATTA------------------------------------ATGTGGAAA---CTTATCTTCCTTTCTGTAATCATGTTAGTAACTGGATACATTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMDSFDNKWRTSILVSGLITFIAAVHYWYMRNYWA-----------------TNATSPTFFRYVDW--------VLTVPLMCVEFYLILKA---A--GATK-SL------------MWK-LIFLSVIMLVTGYIGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_EU683552 [II-CFB-Polaribacter] W17_env_samples_EU683552 gi|187711577|gb|EU683552| Uncultured bacterium clone W17 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W17 putative proteorhodopsin gene, partial cds EU683552 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_[near_Yangtzi_River_estuary]_surface_water_[2m] China Sea marine 31.3 122.2 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCGTTTTTCTTCCTATCAATGAACTCATTTGACAACAAATGGAGAACCTCTATTTTGGTATCAGGTTTGATTACCTTTATCGCTGCGGTACACTATTGGTACATGAGAGACTACTGGGCAACTAATGCTACTTCTCCAACATTCTTCCGTTATGTGGACTGGGTGTTGACCGTACCATTAATGTGTGTTGAGTTTTACCTTATTCTTAAGGCGGCTGGAGCCACAAAATCATTAATGTGGAAACTTATCTTCCTTTCTGTAATCATGTTAGTAACTGGTTATTTTGGTGAA AMMAASAFFFLSMNSFDNKWRTSILVSGLITFIAAVHYWYMRDYWATNATSPTFFRYVDWVLTVPLMCVEFYLILKAAGATKSLMWKLIFLSVIMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCGTTTTTCTTCCTATCAATGAACTCATTTGACAACAAATGGAGAACCTCTATTTTGGTATCAGGTTTGATTACCTTTATCGCTGCGGTACACTATTGGTACATGAGAGACTACTGGGCA---------------------------------------------------ACTAATGCTACTTCTCCAACATTCTTCCGTTATGTGGACTGG------------------------GTGTTGACCGTACCATTAATGTGTGTTGAGTTTTACCTTATTCTTAAGGCG---------GCT------GGAGCCACAAAA---TCATTA------------------------------------ATGTGGAAA---CTTATCTTCCTTTCTGTAATCATGTTAGTAACTGGTTATTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDNKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------TNATSPTFFRYVDW--------VLTVPLMCVEFYLILKA---A--GATK-SL------------MWK-LIFLSVIMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_EU683480 [II-CFB-Polaribacter] A1014_02_env_samples_EU683480 gi|187711433|gb|EU683480| Uncultured bacterium clone A1014 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A1014 putative proteorhodopsin gene, partial cds EU683480 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_surface_water_[2m] China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCGTTTTTCTTCCTATCTATGAACTCTTTTGACAACAAATGGAGAACATCCATTTTGGTATCAGGTTTGATTACCTTCATAGCTGCTGTGCACTATTGGTACATGAGAGACTATTGGGCAACCAATGCCACATCTCCAACATTCTTCCGTTATGTGGACTGGGTATTGACTGTACCATTAATGTGCGTTGAGCTCTATCTAATTTTGAAAGCGGCTGGAGCCACCAAGTCTTTGATGTGGAAATTGATCTTTCTTTCTGTAATCATGTTAGTAACTGGTTACTTTGGTGAA AMMAASAFFFLSMNSFDNKWRTSILVSGLITFIAAVHYWYMRDYWATNATSPTFFRYVDWVLTVPLMCVELYLILKAAGATKSLMWKLIFLSVIMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCGTTTTTCTTCCTATCTATGAACTCTTTTGACAACAAATGGAGAACATCCATTTTGGTATCAGGTTTGATTACCTTCATAGCTGCTGTGCACTATTGGTACATGAGAGACTATTGGGCA---------------------------------------------------ACCAATGCCACATCTCCAACATTCTTCCGTTATGTGGACTGG------------------------GTATTGACTGTACCATTAATGTGCGTTGAGCTCTATCTAATTTTGAAAGCG---------GCT------GGAGCCACCAAG---TCTTTG------------------------------------ATGTGGAAA---TTGATCTTTCTTTCTGTAATCATGTTAGTAACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDNKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------TNATSPTFFRYVDW--------VLTVPLMCVELYLILKA---A--GATK-SL------------MWK-LIFLSVIMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_JX312351 [II-CFB-Polaribacter] Sediminicola_sp_TAK-SED-34_JX312351 gi|404428509|gb|JX312351| Sediminicola sp. TAK-SED-34 proteorhodpsin (PR) gene, partial cds. Sediminicola sp. TAK-SED-34 proteorhodpsin (PR) gene, partial cds. JX312351 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Sediminicola] taxon:1221368 genomic DNA strain 30-sept-13 #na #na #na #na #na Phylogenetic characterization of culturable proteorhodopsin-bearing flavobacteria in marine sediments Li,N. and Kim,J.S. Unpublished #na #na ATGGGGAGCTTTGACAAAAAATGGAGAACCTCAATCCTGGTTTCAGGATTAATTACTTTTATCGCAGCAGTACACTACTGGTACATGCGTGACTACTGGGCTGCCTTTGAGGAGTCCCCAACATTCTTCCGCTATGTGGATTGGATATTGACCGTGCCATTAATGTGTGTGGAATTCTTTTTAATACTAAAGGTAGCGGGAGCCAAGAAATCTCTTATGTGGCGATTAATCGTACTATCCGTTGTAATGCTAGTTACCGGATACTTGGGAGAAGCTGTATATAGAGACCAAGCACAAATTTGGGGTCTAATTTCAGGGATCGCTTATTTCGTAATTGTCTATGACATCTGGTTAGGTAAAGCAAAAAAATTGGCAGAA MGSFDKKWRTSILVSGLITFIAAVHYWYMRDYWAAFEESPTFFRYVDWILTVPLMCVEFFLILKVAGAKKSLMWRLIVLSVVMLVTGYLGEAVYRDQAQIWGLISGIAYFVIVYDIWLGKAKKLAE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGGAGCTTTGACAAAAAATGGAGAACCTCAATCCTGGTTTCAGGATTAATTACTTTTATCGCAGCAGTACACTACTGGTACATGCGTGACTACTGGGCT---------------------------------------------------GCCTTTGAGGAGTCCCCAACATTCTTCCGCTATGTGGATTGG------------------------ATATTGACCGTGCCATTAATGTGTGTGGAATTCTTTTTAATACTAAAGGTA---------GCG------GGAGCCAAGAAA---TCTCTT------------------------------------ATGTGGCGA---TTAATCGTACTATCCGTTGTAATGCTAGTTACCGGATACTTGGGAGAA---------GCT------------------GTA------TATAGA------------------------------------------------------------------------------------------------GACCAAGCA------------------CAAATTTGG---GGTCTAATTTCAGGGATCGCTTATTTCGTAATTGTCTATGACATC---------------TGG------TTA---GGTAAAGCAAAAAAATTGGCAGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------MGSFDKKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------AFEESPTFFRYVDW--------ILTVPLMCVEFFLILKV---A--GAKK-SL------------MWR-LIVLSVVMLVTGYLGE---A------V--YR--------------------------------DQA------QIW-GLISGIAYFVIVYDI-----W--L-GKAKKLAE-------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_JX312352 [II-CFB-Polaribacter] Sediminicola_sp_YIK-SED-23_JX312352 gi|404428511|gb|JX312352| Sediminicola sp. YIK-SED-23 proteorhodpsin (PR) gene, partial cds. Sediminicola sp. YIK-SED-23 proteorhodpsin (PR) gene, partial cds. JX312352 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Sediminicola] taxon:1221370 genomic DNA strain 30-sept-13 #na #na #na #na #na Phylogenetic characterization of culturable proteorhodopsin-bearing flavobacteria in marine sediments Li,N. and Kim,J.S. Unpublished #na #na CTGGTTTCAGGATTAATTACTTTTATCGCAGCAGTACACTACTGGTACATGCGTGACTACTGGGCTGCCTTTGAGGAGTCCCCAACATTCTTCCGCTATGTGGATTGGATATTGACCGTACCATTAATGTGTGTGGAATTCTTTTTAATACTAAAGGTAGCGGGAGCCAAGAAATCTCTTATGTGGCGATTAATCGTACTATCCGTTGTAATGCTAGTTACCGGATACTTGGGAGAAGCTGTATATAGGGACCAAGCACAAATTTGGGGTCTAATTTCAGGGATCGCTTATTTCGTAATTGTCTATGACATCTGGTTAGGTAAAGCAAAAAAATTGGCAGAATCAGCAGGTGGA LVSGLITFIAAVHYWYMRDYWAAFEESPTFFRYVDWILTVPLMCVEFFLILKVAGAKKSLMWRLIVLSVVMLVTGYLGEAVYRDQAQIWGLISGIAYFVIVYDIWLGKAKKLAESAGG ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGGTTTCAGGATTAATTACTTTTATCGCAGCAGTACACTACTGGTACATGCGTGACTACTGGGCT---------------------------------------------------GCCTTTGAGGAGTCCCCAACATTCTTCCGCTATGTGGATTGG------------------------ATATTGACCGTACCATTAATGTGTGTGGAATTCTTTTTAATACTAAAGGTA---------GCG------GGAGCCAAGAAA---TCTCTT------------------------------------ATGTGGCGA---TTAATCGTACTATCCGTTGTAATGCTAGTTACCGGATACTTGGGAGAA---------GCT------------------GTA------TATAGG------------------------------------------------------------------------------------------------GACCAAGCA------------------CAAATTTGG---GGTCTAATTTCAGGGATCGCTTATTTCGTAATTGTCTATGACATC---------------TGG------TTA---GGTAAAGCAAAAAAATTGGCAGAATCA------GCA---GGTGGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------LVSGLITFIAAVHYWYMRDYWA-----------------AFEESPTFFRYVDW--------ILTVPLMCVEFFLILKV---A--GAKK-SL------------MWR-LIVLSVVMLVTGYLGE---A------V--YR--------------------------------DQA------QIW-GLISGIAYFVIVYDI-----W--L-GKAKKLAES--A-GG------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_JX312348 [II-CFB-Polaribacter] Sediminicola_sp_YIK-SED-13_JX312348 gi|404428503|gb|JX312348| Sediminicola sp. YIK-SED-13 proteorhodpsin (PR) gene, partial cds. Sediminicola sp. YIK-SED-13 proteorhodpsin (PR) gene, partial cds. JX312348 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Sediminicola] taxon:1221369 genomic DNA strain 30-sept-13 #na #na #na #na #na Phylogenetic characterization of culturable proteorhodopsin-bearing flavobacteria in marine sediments Li,N. and Kim,J.S. Unpublished #na #na ATGAGCAGCTTCGACAAAAAATGGAGAACTTCAATCCTAGTTTCAGGATTAATTACTTTTATCGCAGCGGTCCACTATTGGTACATGCGTGACTACTGGGCTGCCTTTGAGGAGTCCCCAACTTTCTTTCGTTATGTAGATTGGGTACTAACAGTACCTTTAATGTGCGTAGAATTCTTTTTAATCTTGAAAGTAGCGGGAGCTAAAAAGTCCCTCATGTGGCGTTTAATCTTCCTTTCCGTAGTAATGTTAGTTACGGGTTACATTGGAGAAGCCGTATTAAGAGACCAAGCTTGGCTTTGGGGTCTAATATCGGGTATCGCTTATTTCGTAATTGTTTATGAT MSSFDKKWRTSILVSGLITFIAAVHYWYMRDYWAAFEESPTFFRYVDWVLTVPLMCVEFFLILKVAGAKKSLMWRLIFLSVVMLVTGYIGEAVLRDQAWLWGLISGIAYFVIVYD ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAGCAGCTTCGACAAAAAATGGAGAACTTCAATCCTAGTTTCAGGATTAATTACTTTTATCGCAGCGGTCCACTATTGGTACATGCGTGACTACTGGGCT---------------------------------------------------GCCTTTGAGGAGTCCCCAACTTTCTTTCGTTATGTAGATTGG------------------------GTACTAACAGTACCTTTAATGTGCGTAGAATTCTTTTTAATCTTGAAAGTA---------GCG------GGAGCTAAAAAG---TCCCTC------------------------------------ATGTGGCGT---TTAATCTTCCTTTCCGTAGTAATGTTAGTTACGGGTTACATTGGAGAA---------GCC------------------GTA------TTAAGA------------------------------------------------------------------------------------------------GACCAAGCT------------------TGGCTTTGG---GGTCTAATATCGGGTATCGCTTATTTCGTAATTGTTTATGAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------MSSFDKKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------AFEESPTFFRYVDW--------VLTVPLMCVEFFLILKV---A--GAKK-SL------------MWR-LIFLSVVMLVTGYIGE---A------V--LR--------------------------------DQA------WLW-GLISGIAYFVIVYD--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_AB557548 [II-CFB-Polaribacter] PC4_Kordia_AB557548 gi|376317430|gb|AB557548| Kordia sp PC4 PR gene for proteorhodopsin, partial cds Kordia sp PC4 PR gene for proteorhodopsin, partial cds AB557548 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Kordia] taxon:754422 genomic_DNA strain 03MAY2012 #na seawater Pacific Ocean marine 35 139.3333 Diversity and functional analysis of proteorhodopsin in marine Flavobacteria Yoshizawa,S., Kawanabe,A., Ito,H., Kandori,H. and Kogure,K. Environ. Microbiol. 14 (5), 12401248 (2012) 22329552 #na TTTTTCTTATCAATGAATAGTTTTGATAAGAAGTGGCGTACTTCTATTTTGGTTTCGGGATTGATCACTTTCATCGCTGCTGTACACTATTGGTACATGCGTGATTATTGGGCAAGTGTCGGAGACTCTCCAACATTTTTCCGTTATGTGGACTGGGTATTGACCGTTCCATTGATGTGTGTTGAATTTTACTTAATATTAAAAGTTGCCGGTGCCAAGAAATCACTTATGTGGCGCTTAATCCTTTTATCTGTTGTCATGTTGGTTACAGGATATTTAGGAGAAGCGGTATACTTAGAGCAAGCTCAAATATGGGGATTTGTATCCGGTGCAGCTTATTTTGTGATTGTATATGAAATCTGGTTAGGTAGTGCCAAAAAATTGGCAGAAGCTGCTGGAGGTTATGTACTTAAGGCACATAAAACG FFLSMNSFDKKWRTSILVSGLITFIAAVHYWYMRDYWASVGDSPTFFRYVDWVLTVPLMCVEFYLILKVAGAKKSLMWRLILLSVVMLVTGYLGEAVYLEQAQIWGFVSGAAYFVIVYEIWLGSAKKLAEAAGGYVLKAHKT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTCTTATCAATGAATAGTTTTGATAAGAAGTGGCGTACTTCTATTTTGGTTTCGGGATTGATCACTTTCATCGCTGCTGTACACTATTGGTACATGCGTGATTATTGGGCA---------------------------------------------------AGTGTCGGAGACTCTCCAACATTTTTCCGTTATGTGGACTGG------------------------GTATTGACCGTTCCATTGATGTGTGTTGAATTTTACTTAATATTAAAAGTT---------GCC------GGTGCCAAGAAA---TCACTT------------------------------------ATGTGGCGC---TTAATCCTTTTATCTGTTGTCATGTTGGTTACAGGATATTTAGGAGAA---------GCG------------------GTA------TACTTA------------------------------------------------------------------------------------------------GAGCAAGCT------------------CAAATATGG---GGATTTGTATCCGGTGCAGCTTATTTTGTGATTGTATATGAAATC---------------TGG------TTA---GGTAGTGCCAAAAAATTGGCAGAAGCT------GCT---GGAGGTTAT---GTA---CTT---AAG---GCA---CAT---AAA---ACG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------FFLSMNSFDKKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------SVGDSPTFFRYVDW--------VLTVPLMCVEFYLILKV---A--GAKK-SL------------MWR-LILLSVVMLVTGYLGE---A------V--YL--------------------------------EQA------QIW-GFVSGAAYFVIVYEI-----W--L-GSAKKLAEA--A-GGY-V-L-K-A-H-K-T---------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_FJ560844 [II-CFB-Polaribacter] HEL131_env_samples_FJ560844 gi|223868835|gb|FJ560844| Uncultured microorganism clone HEL131 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL131 putative proteorhodopsin gene, partial cds FJ560844 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACGGTGCCGTTGATGTGTGTTGAATTTTATCTCATCCTGAAAGTAGCCGGAGCGAAAAAATCTCTCATGTGGCGTATGATTTTCTTATCTGTAATCATGCTTGTCACTGGTTATTTCGGCGAAACAATCGATCGTGGCAATGCTCAAGTATGGGGATTGATTTCAGGAATCGCTTATTTCGTTATCGTCTATGATATATGGATGGGTTCTGCCAAGAAGCTGGCCGTAGAAGCTGGAGGGGCGACCCTT TVPLMCVEFYLILKVAGAKKSLMWRMIFLSVIMLVTGYFGETIDRGNAQVWGLISGIAYFVIVYDIWMGSAKKLAVEAGGATL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGGTGCCGTTGATGTGTGTTGAATTTTATCTCATCCTGAAAGTA---------GCC------GGAGCGAAAAAA---TCTCTC------------------------------------ATGTGGCGT---ATGATTTTCTTATCTGTAATCATGCTTGTCACTGGTTATTTCGGCGAA---------ACA------------------ATC------GATCGT------------------------------------------------------------------------------------------------GGCAATGCT------------------CAAGTATGG---GGATTGATTTCAGGAATCGCTTATTTCGTTATCGTCTATGATATA---------------TGG------ATG---GGTTCTGCCAAGAAGCTGGCCGTAGAA------GCT---GGAGGGGCG---ACC---CTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLMCVEFYLILKV---A--GAKK-SL------------MWR-MIFLSVIMLVTGYFGE---T------I--DR--------------------------------GNA------QVW-GLISGIAYFVIVYDI-----W--M-GSAKKLAVE--A-GGA-T-L-------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_NZ_AAOG01000002 [II-CFB-Polaribacter] Polaribacter_irgensii_23_P_1099646005581_genome_NZ_AAOG01000002 gi|88802191|gb|NZ_AAOG01000002| Polaribacter irgensii 23P 1099646005581, whole genome shotgun sequence Polaribacter irgensii 23P 1099646005581, whole genome shotgun sequence NZ_AAOG01000002 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Polaribacter] #na genomic_DNA strain 14-nov-12 #na #na Antarctic Ocean marine -65.25 -64.26667 Direct Submission Murray,A., Staley,J., Ferriera,S., Johnson,J., Kravitz,S., Halpern,A., Remington,K., Beeson,K., Tran,B., Rogers,Y.H., Friedman,R. and Venter,J.C. Submitted (23FEB2006) J Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA #na #na ATGAATTTTCTTTCTGTGACCAAAATGGCGACAGATGATTACGTTGGATTTACATTTTTTGTGGGCTGTATGGCTATGTTGGCAGCATCAGTATTTTTCTTTTTATCAATGAGTAGTTTTGATAAGAAGTGGAGAACTTCTTTATTAGTATCTGGTTTAATTACCTTTATTGCAGCAGTACACTACTTCTACATGAGAGATTATTGGGCAGCTTTCGAAGAGTCTCCAACTTTCTTTAGATATATTGACTGGGTCTTAACAGTTCCATTAATGTGTGTTGAGTTTTATTTAATTCTAAAAGTTGCAGGAGCAAAGAAATCGCTAATGTGGCGTTTAATTTTCTTATCTGTAGTAATGTTAGTAACAGGTTATATTGGAGAAGCAATTGATCCAGCTAACGCTCAAATTTGGGGACTTGCTTCAGGTATCGCATACTTTGTAATTGTTTATGACATCTGGCTAGGAACTGCTAAGAAATTAGCTGTAGCAGCTGGTGGAGAAGTATTGAAAGCTCACAAAGCATTATGTTGGTTCGTATTAGTAGGTTGGGCAATTTACCCAATTGGATACATGGCTGGAACACCAGGATGGTACGATGGTATTTTTGGAGGATGGGATCTAAATATTATTTATAATATCGGAGATGCTATCAACAAAATTGGATTTGGACTAGTGGTATACAACCTTGCTGTTCAGAGCACTACTTCAGCTGCAAAAACAGCT MNFLSVTKMATDDYVGFTFFVGCMAMLAASVFFFLSMSSFDKKWRTSLLVSGLITFIAAVHYFYMRDYWAAFEESPTFFRYIDWVLTVPLMCVEFYLILKVAGAKKSLMWRLIFLSVVMLVTGYIGEAIDPANAQIWGLASGIAYFVIVYDIWLGTAKKLAVAAGGEVLKAHKALCWFVLVGWAIYPIGYMAGTPGWYDGIFGGWDLNIIYNIGDAINKIGFGLVVYNLAVQSTTSAAKTA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAATTTTCTTTCTGTGACCAAAATGGCGACAGATGATTACGTTGGATTTACATTTTTTGTGGGCTGTATGGCTATGTTGGCAGCATCAGTATTTTTCTTTTTATCAATGAGTAGTTTTGATAAGAAGTGGAGAACTTCTTTATTAGTATCTGGTTTAATTACCTTTATTGCAGCAGTACACTACTTCTACATGAGAGATTATTGGGCA---------------------------------------------------GCTTTCGAAGAGTCTCCAACTTTCTTTAGATATATTGACTGG------------------------GTCTTAACAGTTCCATTAATGTGTGTTGAGTTTTATTTAATTCTAAAAGTT---------GCA------GGAGCAAAGAAA---TCGCTA------------------------------------ATGTGGCGT---TTAATTTTCTTATCTGTAGTAATGTTAGTAACAGGTTATATTGGAGAA---------GCA------------------ATT------GATCCA------------------------------------------------------------------------------------------------GCTAACGCT------------------CAAATTTGG---GGACTTGCTTCAGGTATCGCATACTTTGTAATTGTTTATGACATC---------------TGG------CTA---GGAACTGCTAAGAAATTAGCTGTAGCA------GCT---GGTGGAGAA---GTA---TTG---AAA---GCT---CAC---AAA---GCATTA---TGTTGGTTCGTATTAGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCAATTGGATACATGGCTGGAACACCAGGA---TGGTAC---------GAT---GGTATTTTTGGAGGATGGGAT---------------------CTAAATATTATTTATAATATCGGAGATGCTATCAACAAAATTGGATTTGGACTAGTGGTATACAACCTTGCTGTTCAGAGCACTACTTCAGCTGCAAAAACAGCT------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------MNFLSVTKMATDDYVGFTFFVGCMAMLAASVFFFLSMSSFDKKWRTSLLVSGLITFIAAVHYFYMRDYWA-----------------AFEESPTFFRYIDW--------VLTVPLMCVEFYLILKV---A--GAKK-SL------------MWR-LIFLSVVMLVTGYIGE---A------I--DP--------------------------------ANA------QIW-GLASGIAYFVIVYDI-----W--L-GTAKKLAVA--A-GGE-V-L-K-A-H-K-AL-CWFVLV---------------------GW---AIYPIGYMAGTPG-WY---D-GIFGGWD-------LNIIYNIGDAINKIGFGLVVYNLAVQSTTSAAKTA-------------------------------- [II-CFB-Polaribacter]_AB557551 [II-CFB-Polaribacter] PC19_Winogradskyella_AB557551 gi|376317436|gb|AB557551| Winogradskyella sp PC19 PR gene for proteorhodopsin, partial cds Winogradskyella sp PC19 PR gene for proteorhodopsin, partial cds AB557551 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Winogradskyella] taxon:754417 genomic_DNA strain 03MAY2012 #na seawater Pacific Ocean marine 35 139.3333 Diversity and functional analysis of proteorhodopsin in marine Flavobacteria Yoshizawa,S., Kawanabe,A., Ito,H., Kandori,H. and Kogure,K. Environ. Microbiol. 14 (5), 12401248 (2012) 22329552 #na TTCTTTTTATCAATGAATAGTTTTGATAGAAAATGGAGAACTTCAATCCTAGTTTCTGGTCTAATTACATTTATCGCTGCAGTACATTATTGGTACATGAGAGATTATTGGGCTTCTAACATGGAATCTCCAACGTTTTTCAGATATGTTGATTGGGTGTTAACAGTACCGTTAATGTGTGTTGAATTTTACCTTATTCTAAAAGTTGCAGGAGCTAAAAAATCTCTAATGTGGCGTTTAATCTTTTTATCTGTAGTAATGCTTGTCACAGGATATTTAGGAGAAGCAGTGTACAGAGATAGTGCTTGGTTATGGGGATTAATTTCTGGTATAGCATATTTTGTAATTGTTTACGACATTTGGTTTGGAGAAGCAAAAAAATTGGCTTTAAAAGCTGGTGGCGCAGTATTAAAAGCACACAAAACA FFLSMNSFDRKWRTSILVSGLITFIAAVHYWYMRDYWASNMESPTFFRYVDWVLTVPLMCVEFYLILKVAGAKKSLMWRLIFLSVVMLVTGYLGEAVYRDSAWLWGLISGIAYFVIVYDIWFGEAKKLALKAGGAVLKAHKT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTTTATCAATGAATAGTTTTGATAGAAAATGGAGAACTTCAATCCTAGTTTCTGGTCTAATTACATTTATCGCTGCAGTACATTATTGGTACATGAGAGATTATTGGGCT---------------------------------------------------TCTAACATGGAATCTCCAACGTTTTTCAGATATGTTGATTGG------------------------GTGTTAACAGTACCGTTAATGTGTGTTGAATTTTACCTTATTCTAAAAGTT---------GCA------GGAGCTAAAAAA---TCTCTA------------------------------------ATGTGGCGT---TTAATCTTTTTATCTGTAGTAATGCTTGTCACAGGATATTTAGGAGAA---------GCA------------------GTG------TACAGA------------------------------------------------------------------------------------------------GATAGTGCT------------------TGGTTATGG---GGATTAATTTCTGGTATAGCATATTTTGTAATTGTTTACGACATT---------------TGG------TTT---GGAGAAGCAAAAAAATTGGCTTTAAAA------GCT---GGTGGCGCA---GTA---TTA---AAA---GCA---CAC---AAA---ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------FFLSMNSFDRKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------SNMESPTFFRYVDW--------VLTVPLMCVEFYLILKV---A--GAKK-SL------------MWR-LIFLSVVMLVTGYLGE---A------V--YR--------------------------------DSA------WLW-GLISGIAYFVIVYDI-----W--F-GEAKKLALK--A-GGA-V-L-K-A-H-K-T---------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_AB557559 [II-CFB-Polaribacter] PG20_Winogradskyella_AB557559 gi|376317452|gb|AB557559| Winogradskyella sp PG20 PR gene for proteorhodopsin, partial cds Winogradskyella sp PG20 PR gene for proteorhodopsin, partial cds AB557559 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Winogradskyella] taxon:754415 genomic_DNA strain 03MAY2012 #na seawater Pacific Ocean marine 35 139.3333 Diversity and functional analysis of proteorhodopsin in marine Flavobacteria Yoshizawa,S., Kawanabe,A., Ito,H., Kandori,H. and Kogure,K. Environ. Microbiol. 14 (5), 12401248 (2012) 22329552 #na TTCTTTTTATCAATGAATAGTTTTGATAGAAAATGGAGAACTTCAATCCTAGTTTCTGGTCTAATTACATTTATCGCTGCAGTACATTATTGGTACATGAGAGATTATTGGGCTTCTAACATGGAATCTCCAACGTTTTTCAGATATGTTGATTGGGTGTTAACAGTACCGTTAATGTGTGTTGAATTTTACCTTATTCTAAAAGTTGCAGGAGCTAAAAAATCTCTAATGTGGCGTTTAATCTTTTTATCTGTAGTAATGCTTGTCACAGGATATTTAGGAGAAGCAGTGTACAGAGATAGTGCTTGGTTATGGGGATTAATTTCTGGTATAGCATATTTTGTAATTGTTTACGACATTTGGTTTGGAGAAGCAAAAAAATTGGCTTTAAAAGCTGGTGGCGCAGTATTAAAAGCACACAAAACA FFLSMNSFDRKWRTSILVSGLITFIAAVHYWYMRDYWASNMESPTFFRYVDWVLTVPLMCVEFYLILKVAGAKKSLMWRLIFLSVVMLVTGYLGEAVYRDSAWLWGLISGIAYFVIVYDIWFGEAKKLALKAGGAVLKAHKT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTTTATCAATGAATAGTTTTGATAGAAAATGGAGAACTTCAATCCTAGTTTCTGGTCTAATTACATTTATCGCTGCAGTACATTATTGGTACATGAGAGATTATTGGGCT---------------------------------------------------TCTAACATGGAATCTCCAACGTTTTTCAGATATGTTGATTGG------------------------GTGTTAACAGTACCGTTAATGTGTGTTGAATTTTACCTTATTCTAAAAGTT---------GCA------GGAGCTAAAAAA---TCTCTA------------------------------------ATGTGGCGT---TTAATCTTTTTATCTGTAGTAATGCTTGTCACAGGATATTTAGGAGAA---------GCA------------------GTG------TACAGA------------------------------------------------------------------------------------------------GATAGTGCT------------------TGGTTATGG---GGATTAATTTCTGGTATAGCATATTTTGTAATTGTTTACGACATT---------------TGG------TTT---GGAGAAGCAAAAAAATTGGCTTTAAAA------GCT---GGTGGCGCA---GTA---TTA---AAA---GCA---CAC---AAA---ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------FFLSMNSFDRKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------SNMESPTFFRYVDW--------VLTVPLMCVEFYLILKV---A--GAKK-SL------------MWR-LIFLSVVMLVTGYLGE---A------V--YR--------------------------------DSA------WLW-GLISGIAYFVIVYDI-----W--F-GEAKKLALK--A-GGA-V-L-K-A-H-K-T---------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_AB557555 [II-CFB-Polaribacter] PG10_Winogradskyella_AB557555 gi|376317444|gb|AB557555| Winogradskyella sp PG10 PR gene for proteorhodopsin, partial cds Winogradskyella sp PG10 PR gene for proteorhodopsin, partial cds AB557555 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Winogradskyella] taxon:754414 genomic_DNA strain 03MAY2012 #na seawater Pacific Ocean marine 35 139.3333 Diversity and functional analysis of proteorhodopsin in marine Flavobacteria Yoshizawa,S., Kawanabe,A., Ito,H., Kandori,H. and Kogure,K. Environ. Microbiol. 14 (5), 12401248 (2012) 22329552 #na TTCTTTTTATCAATGAATAGTTTTGATAGAAAATGGAGAACTTCAATCCTAGTTTCTGGTCTAATTACATTTATCGCTGCAGTACATTATTGGTACATGAGAGATTATTGGGCTTCTAACATGGAATCTCCAACGTTTTTCAGATATGTTGATTGGGTGTTAACAGTACCGTTAATGTGTGTTGAATTTTACCTTATTCTAAAAGTTGCAGGAGCTAAAAAATCTCTAATGTGGCGTTTAATCTTTTTATCTGTAGTAATGCTTGTCACAGGATATTTAGGAGAAGCAGTGTACAGAGATAGTGCTTGGTTATGGGGATTAATTTCTGGTATAGCATATTTTGTAATTGTTTACGACATTTGGTTTGGAGAAGCAAAAAAATTGGCTTTAAAAGCTGGTGGCGCAGTATTAAAAGCACACAAAACA FFLSMNSFDRKWRTSILVSGLITFIAAVHYWYMRDYWASNMESPTFFRYVDWVLTVPLMCVEFYLILKVAGAKKSLMWRLIFLSVVMLVTGYLGEAVYRDSAWLWGLISGIAYFVIVYDIWFGEAKKLALKAGGAVLKAHKT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTTTATCAATGAATAGTTTTGATAGAAAATGGAGAACTTCAATCCTAGTTTCTGGTCTAATTACATTTATCGCTGCAGTACATTATTGGTACATGAGAGATTATTGGGCT---------------------------------------------------TCTAACATGGAATCTCCAACGTTTTTCAGATATGTTGATTGG------------------------GTGTTAACAGTACCGTTAATGTGTGTTGAATTTTACCTTATTCTAAAAGTT---------GCA------GGAGCTAAAAAA---TCTCTA------------------------------------ATGTGGCGT---TTAATCTTTTTATCTGTAGTAATGCTTGTCACAGGATATTTAGGAGAA---------GCA------------------GTG------TACAGA------------------------------------------------------------------------------------------------GATAGTGCT------------------TGGTTATGG---GGATTAATTTCTGGTATAGCATATTTTGTAATTGTTTACGACATT---------------TGG------TTT---GGAGAAGCAAAAAAATTGGCTTTAAAA------GCT---GGTGGCGCA---GTA---TTA---AAA---GCA---CAC---AAA---ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------FFLSMNSFDRKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------SNMESPTFFRYVDW--------VLTVPLMCVEFYLILKV---A--GAKK-SL------------MWR-LIFLSVVMLVTGYLGE---A------V--YR--------------------------------DSA------WLW-GLISGIAYFVIVYDI-----W--F-GEAKKLALK--A-GGA-V-L-K-A-H-K-T---------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_AB557574 [II-CFB-Polaribacter] SZ30_Winogradskyella_AB557574 gi|376317482|gb|AB557574| Winogradskyella sp SZ30 PR gene for proteorhodopsin, partial cds Winogradskyella sp SZ30 PR gene for proteorhodopsin, partial cds AB557574 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Winogradskyella] taxon:754432 genomic_DNA strain 03MAY2012 #na seawater Pacific Ocean marine 35 139.3333 Diversity and functional analysis of proteorhodopsin in marine Flavobacteria Yoshizawa,S., Kawanabe,A., Ito,H., Kandori,H. and Kogure,K. Environ. Microbiol. 14 (5), 12401248 (2012) 22329552 #na TTCTTTTTATCAATGAATAGTTTTGATAGAAAATGGAGAACTTCAATCCTAGTTTCTGGTCTAATTACATTTATCGCTGCAGTACATTATTGGTACATGAGAGATTATTGGGCTTCTAACATGGAATCTCCAACGTTTTTCAGATATGTTGATTGGGTGTTAACAGTACCGTTAATGTGTGTTGAATTTTACCTTATTCTAAAAGTTGCAGGAGCTAAAAAATCTCTAATGTGGCGTTTAATCTTTTTATCTGTAGTAATGCTTGTCACAGGATATTTAGGAGAAGCAGTGTACAGAGATAGTGCTTGGTTATGGGGATTAATTTCTGGTATAGCATATTTTGTAATTGTTTACGACATTTGGTTTGGAGAAGCAAAAAAATTGGCTTTAAAAGCTGGTGGCGCAGTATTAAAAGCACACAAAACA FFLSMNSFDRKWRTSILVSGLITFIAAVHYWYMRDYWASNMESPTFFRYVDWVLTVPLMCVEFYLILKVAGAKKSLMWRLIFLSVVMLVTGYLGEAVYRDSAWLWGLISGIAYFVIVYDIWFGEAKKLALKAGGAVLKAHKT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTTTATCAATGAATAGTTTTGATAGAAAATGGAGAACTTCAATCCTAGTTTCTGGTCTAATTACATTTATCGCTGCAGTACATTATTGGTACATGAGAGATTATTGGGCT---------------------------------------------------TCTAACATGGAATCTCCAACGTTTTTCAGATATGTTGATTGG------------------------GTGTTAACAGTACCGTTAATGTGTGTTGAATTTTACCTTATTCTAAAAGTT---------GCA------GGAGCTAAAAAA---TCTCTA------------------------------------ATGTGGCGT---TTAATCTTTTTATCTGTAGTAATGCTTGTCACAGGATATTTAGGAGAA---------GCA------------------GTG------TACAGA------------------------------------------------------------------------------------------------GATAGTGCT------------------TGGTTATGG---GGATTAATTTCTGGTATAGCATATTTTGTAATTGTTTACGACATT---------------TGG------TTT---GGAGAAGCAAAAAAATTGGCTTTAAAA------GCT---GGTGGCGCA---GTA---TTA---AAA---GCA---CAC---AAA---ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------FFLSMNSFDRKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------SNMESPTFFRYVDW--------VLTVPLMCVEFYLILKV---A--GAKK-SL------------MWR-LIFLSVVMLVTGYLGE---A------V--YR--------------------------------DSA------WLW-GLISGIAYFVIVYDI-----W--F-GEAKKLALK--A-GGA-V-L-K-A-H-K-T---------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_AB557560 [II-CFB-Polaribacter] PZ11_Winogradskyella_AB557560 gi|376317454|gb|AB557560| Winogradskyella sp PZ11 PR gene for proteorhodopsin, partial cds Winogradskyella sp PZ11 PR gene for proteorhodopsin, partial cds AB557560 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Winogradskyella] taxon:754412 genomic_DNA strain 03MAY2012 #na seawater Pacific Ocean marine 35 139.3333 Diversity and functional analysis of proteorhodopsin in marine Flavobacteria Yoshizawa,S., Kawanabe,A., Ito,H., Kandori,H. and Kogure,K. Environ. Microbiol. 14 (5), 12401248 (2012) 22329552 #na TTCTTTTTATCAATGAATAGTTTTGATAGAAAATGGAGAACTTCAATCCTAGTTTCTGGTCTAATTACATTTATCGCTGCAGTACATTATTGGTACATGAGAGATTATTGGGCTTCTAACATGGAATCTCCAACGTTTTTCAGATATGTTGATTGGGTGTTAACAGTACCGTTAATGTGTGTTGAATTTTACCTTATTCTAAAAGTTGCAGGAGCTAAAAAATCTCTAATGTGGCGTTTAATCTTTTTATCTGTAGTAATGCTTGTCACAGGATATTTAGGAGAAGCAGTGTACAGAGATAGTGCTTGGTTATGGGGATTAATTTCTGGTATAGCATATTTTGTAATTGTTTACGACATTTGGTTTGGAGAAGCAAAAAAATTGGCTTTAAAAGCTGGTGGCGCAGTATTAAAAGCACACAAAACA FFLSMNSFDRKWRTSILVSGLITFIAAVHYWYMRDYWASNMESPTFFRYVDWVLTVPLMCVEFYLILKVAGAKKSLMWRLIFLSVVMLVTGYLGEAVYRDSAWLWGLISGIAYFVIVYDIWFGEAKKLALKAGGAVLKAHKT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTTTATCAATGAATAGTTTTGATAGAAAATGGAGAACTTCAATCCTAGTTTCTGGTCTAATTACATTTATCGCTGCAGTACATTATTGGTACATGAGAGATTATTGGGCT---------------------------------------------------TCTAACATGGAATCTCCAACGTTTTTCAGATATGTTGATTGG------------------------GTGTTAACAGTACCGTTAATGTGTGTTGAATTTTACCTTATTCTAAAAGTT---------GCA------GGAGCTAAAAAA---TCTCTA------------------------------------ATGTGGCGT---TTAATCTTTTTATCTGTAGTAATGCTTGTCACAGGATATTTAGGAGAA---------GCA------------------GTG------TACAGA------------------------------------------------------------------------------------------------GATAGTGCT------------------TGGTTATGG---GGATTAATTTCTGGTATAGCATATTTTGTAATTGTTTACGACATT---------------TGG------TTT---GGAGAAGCAAAAAAATTGGCTTTAAAA------GCT---GGTGGCGCA---GTA---TTA---AAA---GCA---CAC---AAA---ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------FFLSMNSFDRKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------SNMESPTFFRYVDW--------VLTVPLMCVEFYLILKV---A--GAKK-SL------------MWR-LIFLSVVMLVTGYLGE---A------V--YR--------------------------------DSA------WLW-GLISGIAYFVIVYDI-----W--F-GEAKKLALK--A-GGA-V-L-K-A-H-K-T---------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_AB557550 [II-CFB-Polaribacter] PC10_Winogradskyella_AB557550 gi|376317434|gb|AB557550| Winogradskyella sp PC10 PR gene for proteorhodopsin, partial cds Winogradskyella sp PC10 PR gene for proteorhodopsin, partial cds AB557550 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Winogradskyella] taxon:754416 genomic_DNA strain 03MAY2012 #na seawater Pacific Ocean marine 35 139.3333 Diversity and functional analysis of proteorhodopsin in marine Flavobacteria Yoshizawa,S., Kawanabe,A., Ito,H., Kandori,H. and Kogure,K. Environ. Microbiol. 14 (5), 12401248 (2012) 22329552 #na TTCTTTTTATCAATGAATAGTTTTGATAGAAAATGGAGAACTTCAATCCTAGTTTCTGGTCTAATTACATTTATCGCTGCAGTACATTATTGGTACATGAGAGATTATTGGGCTTCTAACATGGAATCTCCAACGTTTTTCAGATATGTTGATTGGGTGTTAACAGTACCGTTAATGTGTGTTGAATTTTACCTTATTCTAAAAGTTGCAGGAGCTAAAAAATCTCTAATGTGGCGTTTAATCTTTTTATCTGTAGTAATGCTTGTCACAGGATATTTAGGAGAAGCAGTGTACAGAGATAGTGCTTGGTTATGGGGATTAATTTCTGGTATAGCATATTTTGTAATTGTTTACGACATTTGGTTTGGAGAAGCAAAAAAATTGGCTTTAAAAGCTGGTGGCGCAGTATTAAAAGCACACAAAACA FFLSMNSFDRKWRTSILVSGLITFIAAVHYWYMRDYWASNMESPTFFRYVDWVLTVPLMCVEFYLILKVAGAKKSLMWRLIFLSVVMLVTGYLGEAVYRDSAWLWGLISGIAYFVIVYDIWFGEAKKLALKAGGAVLKAHKT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTTTATCAATGAATAGTTTTGATAGAAAATGGAGAACTTCAATCCTAGTTTCTGGTCTAATTACATTTATCGCTGCAGTACATTATTGGTACATGAGAGATTATTGGGCT---------------------------------------------------TCTAACATGGAATCTCCAACGTTTTTCAGATATGTTGATTGG------------------------GTGTTAACAGTACCGTTAATGTGTGTTGAATTTTACCTTATTCTAAAAGTT---------GCA------GGAGCTAAAAAA---TCTCTA------------------------------------ATGTGGCGT---TTAATCTTTTTATCTGTAGTAATGCTTGTCACAGGATATTTAGGAGAA---------GCA------------------GTG------TACAGA------------------------------------------------------------------------------------------------GATAGTGCT------------------TGGTTATGG---GGATTAATTTCTGGTATAGCATATTTTGTAATTGTTTACGACATT---------------TGG------TTT---GGAGAAGCAAAAAAATTGGCTTTAAAA------GCT---GGTGGCGCA---GTA---TTA---AAA---GCA---CAC---AAA---ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------FFLSMNSFDRKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------SNMESPTFFRYVDW--------VLTVPLMCVEFYLILKV---A--GAKK-SL------------MWR-LIFLSVVMLVTGYLGE---A------V--YR--------------------------------DSA------WLW-GLISGIAYFVIVYDI-----W--F-GEAKKLALK--A-GGA-V-L-K-A-H-K-T---------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_AB557553 [II-CFB-Polaribacter] PG3_Winogradskyella_AB557553 gi|376317440|gb|AB557553| Winogradskyella sp PG3 PR gene for proteorhodopsin, partial cds Winogradskyella sp PG3 PR gene for proteorhodopsin, partial cds AB557553 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Winogradskyella] taxon:754413 genomic_DNA strain 03MAY2012 #na seawater Pacific Ocean marine 35 139.3333 Diversity and functional analysis of proteorhodopsin in marine Flavobacteria Yoshizawa,S., Kawanabe,A., Ito,H., Kandori,H. and Kogure,K. Environ. Microbiol. 14 (5), 12401248 (2012) 22329552 #na TTCTTTTTATCAATGAATAGTTTTGATAGAAAATGGAGAACTTCAATCCTAGTTTCTGGTCTAATTACATTTATCGCTGCAGTACATTATTGGTACATGAGAGATTATTGGGCTTCTAACATGGAATCTCCAACGTTTTTCAGATATGTTGATTGGGTGTTAACAGTACCGTTAATGTGTGTTGAATTTTACCTTATTCTAAAAGTTGCAGGAGCTAAAAAATCTCTAATGTGGCGTTTAATCTTTTTATCTGTAGTAATGCTTGTCACAGGATATTTAGGAGAAGCAGTGTACAGAGATAGTGCTTGGTTATGGGGATTAATTTCTGGTATAGCATATTTTGTAATTGTTTACGACATTTGGTTTGGAGAAGCAAAAAAATTGGCTTTAAAAGCTGGTGGCGCAGTATTAAAAGCACACAAAACA FFLSMNSFDRKWRTSILVSGLITFIAAVHYWYMRDYWASNMESPTFFRYVDWVLTVPLMCVEFYLILKVAGAKKSLMWRLIFLSVVMLVTGYLGEAVYRDSAWLWGLISGIAYFVIVYDIWFGEAKKLALKAGGAVLKAHKT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTTTATCAATGAATAGTTTTGATAGAAAATGGAGAACTTCAATCCTAGTTTCTGGTCTAATTACATTTATCGCTGCAGTACATTATTGGTACATGAGAGATTATTGGGCT---------------------------------------------------TCTAACATGGAATCTCCAACGTTTTTCAGATATGTTGATTGG------------------------GTGTTAACAGTACCGTTAATGTGTGTTGAATTTTACCTTATTCTAAAAGTT---------GCA------GGAGCTAAAAAA---TCTCTA------------------------------------ATGTGGCGT---TTAATCTTTTTATCTGTAGTAATGCTTGTCACAGGATATTTAGGAGAA---------GCA------------------GTG------TACAGA------------------------------------------------------------------------------------------------GATAGTGCT------------------TGGTTATGG---GGATTAATTTCTGGTATAGCATATTTTGTAATTGTTTACGACATT---------------TGG------TTT---GGAGAAGCAAAAAAATTGGCTTTAAAA------GCT---GGTGGCGCA---GTA---TTA---AAA---GCA---CAC---AAA---ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------FFLSMNSFDRKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------SNMESPTFFRYVDW--------VLTVPLMCVEFYLILKV---A--GAKK-SL------------MWR-LIFLSVVMLVTGYLGE---A------V--YR--------------------------------DSA------WLW-GLISGIAYFVIVYDI-----W--F-GEAKKLALK--A-GGA-V-L-K-A-H-K-T---------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_AB557566 [II-CFB-Polaribacter] SC29_Tenacibaculum_AB557566 gi|376317466|gb|AB557566| Tenacibaculum sp SC29 PR gene for proteorhodopsin, partial cds Tenacibaculum sp SC29 PR gene for proteorhodopsin, partial cds AB557566 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Tenacibaculum] taxon:754428 genomic_DNA strain 03MAY2012 #na seawater Pacific Ocean marine 35 139.3333 Diversity and functional analysis of proteorhodopsin in marine Flavobacteria Yoshizawa,S., Kawanabe,A., Ito,H., Kandori,H. and Kogure,K. Environ. Microbiol. 14 (5), 12401248 (2012) 22329552 #na TTTTTCTTTTCAATGAATACTTTTGATAAAAAATGGAGAACTTCTATTTTAGTTTCTGGACTAATTACTTTTATAGCAGCTGTTCATTATTGGTATATGAGAGATTATTGGAGTGCGTATGGAGAGTCTCCAACATTCTTTAGATATGTTGACTGGATTTTAACTGTTCCTTTAATGTGTGTCGAATTTTATTTAATTCTTAAGGCGGCAGGAGCTAAAAAATCATTAATGTGGCGAATGATTTCTCTATCTATCGTGATGCTTGTTACTGGATATATTGGAGAAGCCGTTAACAGAGATAATGCTCAGATATGGGGGTTGATTTCTGGAATAGCTTATTTTGCAATAGCTTATGATATCTGGTTTGGGAATGCTAAAAAGTTAGCATTGTCTGCTGGAGATTCTATTCTGACCGCTCATAAGGCT FFFSMNTFDKKWRTSILVSGLITFIAAVHYWYMRDYWSAYGESPTFFRYVDWILTVPLMCVEFYLILKAAGAKKSLMWRMISLSIVMLVTGYIGEAVNRDNAQIWGLISGIAYFAIAYDIWFGNAKKLALSAGDSILTAHKA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTCTTTTCAATGAATACTTTTGATAAAAAATGGAGAACTTCTATTTTAGTTTCTGGACTAATTACTTTTATAGCAGCTGTTCATTATTGGTATATGAGAGATTATTGGAGT---------------------------------------------------GCGTATGGAGAGTCTCCAACATTCTTTAGATATGTTGACTGG------------------------ATTTTAACTGTTCCTTTAATGTGTGTCGAATTTTATTTAATTCTTAAGGCG---------GCA------GGAGCTAAAAAA---TCATTA------------------------------------ATGTGGCGA---ATGATTTCTCTATCTATCGTGATGCTTGTTACTGGATATATTGGAGAA---------GCC------------------GTT------AACAGA------------------------------------------------------------------------------------------------GATAATGCT------------------CAGATATGG---GGGTTGATTTCTGGAATAGCTTATTTTGCAATAGCTTATGATATC---------------TGG------TTT---GGGAATGCTAAAAAGTTAGCATTGTCT------GCT---GGAGATTCT---ATT---CTG---ACC---GCT---CAT---AAG---GCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------FFFSMNTFDKKWRTSILVSGLITFIAAVHYWYMRDYWS-----------------AYGESPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GAKK-SL------------MWR-MISLSIVMLVTGYIGE---A------V--NR--------------------------------DNA------QIW-GLISGIAYFAIAYDI-----W--F-GNAKKLALS--A-GDS-I-L-T-A-H-K-A---------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_AB557571 [II-CFB-Polaribacter] SG28_Tenacibaculum_AB557571 gi|376317476|gb|AB557571| Tenacibaculum sp SG28 PR gene for proteorhodopsin, partial cds Tenacibaculum sp SG28 PR gene for proteorhodopsin, partial cds AB557571 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Tenacibaculum] taxon:754426 genomic_DNA strain 03MAY2012 #na seawater Pacific Ocean marine 35 139.3333 Diversity and functional analysis of proteorhodopsin in marine Flavobacteria Yoshizawa,S., Kawanabe,A., Ito,H., Kandori,H. and Kogure,K. Environ. Microbiol. 14 (5), 12401248 (2012) 22329552 #na TTCTTTTTTTCCATGAGTACTTTTGATAAAAAGTGGCGTCTTTCTATTTTAGTTTCTGGGCTAATCACTTTTATAGCAGCAGTGCATTATTGGTACATGCGTGACTATTGGGGTGCTTATGGAGAATCACCTACATTTTTTAGATATGTAGATTGGATCTTAACCGTACCTTTAATGTGTGTTGAATTCTTTTTAATTCTCAAGGTTGCTGGCGCTAAAAAATCTCTTATGTGGAGATTGATATTTTTATCGGTTGTAATGTTAGTTACAGGATATATTGGTGAAGCAGTAAATAGAGACAACGCTTGGTTGTGGGGTCTTATTTCAGGTATTGCCTATTTCATAATAGCGTATGATATTTGGTTCGGACAAGCAAAAAAGTTAGCTCTTTCTGCGGGAGGTTCTGTTTTGAGTGCCCACAAAGCC FFFSMSTFDKKWRLSILVSGLITFIAAVHYWYMRDYWGAYGESPTFFRYVDWILTVPLMCVEFFLILKVAGAKKSLMWRLIFLSVVMLVTGYIGEAVNRDNAWLWGLISGIAYFIIAYDIWFGQAKKLALSAGGSVLSAHKA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTTTTTCCATGAGTACTTTTGATAAAAAGTGGCGTCTTTCTATTTTAGTTTCTGGGCTAATCACTTTTATAGCAGCAGTGCATTATTGGTACATGCGTGACTATTGGGGT---------------------------------------------------GCTTATGGAGAATCACCTACATTTTTTAGATATGTAGATTGG------------------------ATCTTAACCGTACCTTTAATGTGTGTTGAATTCTTTTTAATTCTCAAGGTT---------GCT------GGCGCTAAAAAA---TCTCTT------------------------------------ATGTGGAGA---TTGATATTTTTATCGGTTGTAATGTTAGTTACAGGATATATTGGTGAA---------GCA------------------GTA------AATAGA------------------------------------------------------------------------------------------------GACAACGCT------------------TGGTTGTGG---GGTCTTATTTCAGGTATTGCCTATTTCATAATAGCGTATGATATT---------------TGG------TTC---GGACAAGCAAAAAAGTTAGCTCTTTCT------GCG---GGAGGTTCT---GTT---TTG---AGT---GCC---CAC---AAA---GCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------FFFSMSTFDKKWRLSILVSGLITFIAAVHYWYMRDYWG-----------------AYGESPTFFRYVDW--------ILTVPLMCVEFFLILKV---A--GAKK-SL------------MWR-LIFLSVVMLVTGYIGE---A------V--NR--------------------------------DNA------WLW-GLISGIAYFIIAYDI-----W--F-GQAKKLALS--A-GGS-V-L-S-A-H-K-A---------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_AB557565 [II-CFB-Polaribacter] SC28_Tenacibaculum_AB557565 gi|376317464|gb|AB557565| Tenacibaculum sp SC28 PR gene for proteorhodopsin, partial cds Tenacibaculum sp SC28 PR gene for proteorhodopsin, partial cds AB557565 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Tenacibaculum] taxon:754427 genomic_DNA strain 03MAY2012 #na seawater Pacific Ocean marine 35 139.3333 Diversity and functional analysis of proteorhodopsin in marine Flavobacteria Yoshizawa,S., Kawanabe,A., Ito,H., Kandori,H. and Kogure,K. Environ. Microbiol. 14 (5), 12401248 (2012) 22329552 #na TTCTTTTTATCTATGAATACTTTCGAAAGAAAGTGGCGTCTCTCTATCCTTGTTTCGGGGCTGATTACTTTTATCGCCGCGGTACACTATTGGTACATGAGAGATTATTGGGGTGCTTACGGAGAGTCTCCAACTTTCTTTAGATATGTGGATTGGATTTTGACCGTTCCTTTAATGTGTGTCGAGTTTTACTTGATTTTAAAGGCGGCAGGAGCCAAAAAATCGTTAATGTGGCGTATGATCCTTTTATCTGTAGTAATGTTAGTTACAGGATATATCGGAGAAGCGGTAAACAGACCAAATGCACAGTTATGGGGCTTAATCTCTGGATTGGCTTATTTTGCTATTGCTTATGATATTTGGTTTGGAAAAGCGAAACAGTTGGCTTTAAAAGCAGGAGGTTCTGTTTTAAGTGCACACAAAGCA FFLSMNTFERKWRLSILVSGLITFIAAVHYWYMRDYWGAYGESPTFFRYVDWILTVPLMCVEFYLILKAAGAKKSLMWRMILLSVVMLVTGYIGEAVNRPNAQLWGLISGLAYFAIAYDIWFGKAKQLALKAGGSVLSAHKA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTTTATCTATGAATACTTTCGAAAGAAAGTGGCGTCTCTCTATCCTTGTTTCGGGGCTGATTACTTTTATCGCCGCGGTACACTATTGGTACATGAGAGATTATTGGGGT---------------------------------------------------GCTTACGGAGAGTCTCCAACTTTCTTTAGATATGTGGATTGG------------------------ATTTTGACCGTTCCTTTAATGTGTGTCGAGTTTTACTTGATTTTAAAGGCG---------GCA------GGAGCCAAAAAA---TCGTTA------------------------------------ATGTGGCGT---ATGATCCTTTTATCTGTAGTAATGTTAGTTACAGGATATATCGGAGAA---------GCG------------------GTA------AACAGA------------------------------------------------------------------------------------------------CCAAATGCA------------------CAGTTATGG---GGCTTAATCTCTGGATTGGCTTATTTTGCTATTGCTTATGATATT---------------TGG------TTT---GGAAAAGCGAAACAGTTGGCTTTAAAA------GCA---GGAGGTTCT---GTT---TTA---AGT---GCA---CAC---AAA---GCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------FFLSMNTFERKWRLSILVSGLITFIAAVHYWYMRDYWG-----------------AYGESPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GAKK-SL------------MWR-MILLSVVMLVTGYIGE---A------V--NR--------------------------------PNA------QLW-GLISGLAYFAIAYDI-----W--F-GKAKQLALK--A-GGS-V-L-S-A-H-K-A---------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_EU683547 [II-CFB-b] A9018_02_env_samples_EU683547 gi|187711567|gb|EU683547| Uncultured bacterium clone A9018 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A9018 putative proteorhodopsin gene, partial cds EU683547 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_surface_water_[2m] China Sea marine 22 114 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCTGCATCTGTCTTTTTCTTTCTAAATTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACATTTATCGCTGCCGTTCGCTATATGTACATGAGGGATGCTCACGCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGGATTTTAACAGTACCATTAATGTGCGTTGAGTTCTATCTAATTCTTAAAGCTGCAGGTGCTACCACTGGTCATCTAAAAACTTTAGTATGGGCGTCTACTGTAATGCTTGTTACTGGTTACTTTGGTGAA AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVRYMYMRDAHAAGDSTTIFRYVDWILTVPLMCVEFYLILKAAGATTGHLKTLVWASTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCTGCATCTGTCTTTTTCTTTCTAAATTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACATTTATCGCTGCCGTTCGCTATATGTACATGAGGGATGCTCAC------------------------------------------------------GCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGG------------------------ATTTTAACAGTACCATTAATGTGCGTTGAGTTCTATCTAATTCTTAAAGCT---------GCA------GGTGCTACCACT---GGTCAT------------------------------------CTAAAAACT---TTAGTATGGGCGTCTACTGTAATGCTTGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVRYMYMRDAH------------------AAGDSTTIFRYVDW--------ILTVPLMCVEFYLILKA---A--GATT-GH------------LKT-LVWASTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_EU683538 [II-CFB-b] A906_02_env_samples_EU683538 gi|187711549|gb|EU683538| Uncultured bacterium clone A906 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A906 putative proteorhodopsin gene, partial cds EU683538 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_surface_water_[2m] China Sea marine 22 114 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCTGCATCTGTCTTTTTCTTTCTAAATTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACATTTATCGCTGCCGTTCACTACATGTACATGAGAGATGCTCACGCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGGATTTTAACAGTACCATTAATGTGCGTTGAATTCTATCTAATTCTTAAAGCTGCAGGTGCTACTACTGGTCATCTAAAAACTTTAGTATGGGCGTCTACTGTAATGCTTGTTACTGGTTACTTTGGTGAA AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAHAAGDSTTIFRYVDWILTVPLMCVEFYLILKAAGATTGHLKTLVWASTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCTGCATCTGTCTTTTTCTTTCTAAATTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACATTTATCGCTGCCGTTCACTACATGTACATGAGAGATGCTCAC------------------------------------------------------GCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGG------------------------ATTTTAACAGTACCATTAATGTGCGTTGAATTCTATCTAATTCTTAAAGCT---------GCA------GGTGCTACTACT---GGTCAT------------------------------------CTAAAAACT---TTAGTATGGGCGTCTACTGTAATGCTTGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAH------------------AAGDSTTIFRYVDW--------ILTVPLMCVEFYLILKA---A--GATT-GH------------LKT-LVWASTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_EU683556 [II-CFB-b] W116_env_samples_EU683556 gi|187711585|gb|EU683556| Uncultured bacterium clone W116 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W116 putative proteorhodopsin gene, partial cds EU683556 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_[near_Yangtzi_River_estuary]_surface_water_[2m] China Sea marine 31.3 122.2 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCTGCATCTGTCTTTTTCTTTCTAAATTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACATTTATCGCTGCCGTTCACTACATGTACATGAGAGATGCTCACGCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGGATTTTAACAGTACCATTAATGTGCGTTGAGTTCTATCTAATTCTTAAAGCTGCAGGTGCTACTACTGGTCATCTAAAAACTTTAGTATGGGCGTCTACTGTAATGCTTGTTACTGGTTACTTTGGTGAA AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAHAAGDSTTIFRYVDWILTVPLMCVEFYLILKAAGATTGHLKTLVWASTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCTGCATCTGTCTTTTTCTTTCTAAATTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACATTTATCGCTGCCGTTCACTACATGTACATGAGAGATGCTCAC------------------------------------------------------GCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGG------------------------ATTTTAACAGTACCATTAATGTGCGTTGAGTTCTATCTAATTCTTAAAGCT---------GCA------GGTGCTACTACT---GGTCAT------------------------------------CTAAAAACT---TTAGTATGGGCGTCTACTGTAATGCTTGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAH------------------AAGDSTTIFRYVDW--------ILTVPLMCVEFYLILKA---A--GATT-GH------------LKT-LVWASTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_EU683531 [II-CFB-b] A9047_3_env_samples_EU683531 gi|187711535|gb|EU683531| Uncultured bacterium clone A9047 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A9047 putative proteorhodopsin gene, partial cds EU683531 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_surface_water_[2m] China Sea marine 22 114 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAATTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACATTTATCGCTGCCGTTCACTACATGTACATGAGAGATGCTCACGCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGGATTTTAACAGTACCATTAATGTGCGTTGAGTTCTATCTAATTCTCAAAGCTGCAGGTGCTACTACTGGTCATCTAAAAACTTTAGTATGGGCGTCTACTGTAATGCTTGTTACTGGTTACTTTGGTGAA AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAHAAGDSTTIFRYVDWILTVPLMCVEFYLILKAAGATTGHLKTLVWASTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAATTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACATTTATCGCTGCCGTTCACTACATGTACATGAGAGATGCTCAC------------------------------------------------------GCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGG------------------------ATTTTAACAGTACCATTAATGTGCGTTGAGTTCTATCTAATTCTCAAAGCT---------GCA------GGTGCTACTACT---GGTCAT------------------------------------CTAAAAACT---TTAGTATGGGCGTCTACTGTAATGCTTGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAH------------------AAGDSTTIFRYVDW--------ILTVPLMCVEFYLILKA---A--GATT-GH------------LKT-LVWASTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_EU683573 [II-CFB-b] W8022_env_samples_EU683573 gi|187711619|gb|EU683573| Uncultured bacterium clone W8022 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W8022 putative proteorhodopsin gene, partial cds EU683573 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_surface_water_[2m] China Sea marine 30.5 125.52 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAATTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACATTTATCGCTGCCGTTCACTACATGTACATGAGAGATGCTCACGCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGGATTTTAACAGTACCATTAATGTGCGTTGAGTTCTATCTAATTCTCAAAGCTGCAGGTGCTACTACTGGTCATCTAAAAACTTTAGTATGGGCGTCTACTGTAATGCTTGTTACTGGTTACTTTGGTGAA AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAHAAGDSTTIFRYVDWILTVPLMCVEFYLILKAAGATTGHLKTLVWASTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAATTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACATTTATCGCTGCCGTTCACTACATGTACATGAGAGATGCTCAC------------------------------------------------------GCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGG------------------------ATTTTAACAGTACCATTAATGTGCGTTGAGTTCTATCTAATTCTCAAAGCT---------GCA------GGTGCTACTACT---GGTCAT------------------------------------CTAAAAACT---TTAGTATGGGCGTCTACTGTAATGCTTGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAH------------------AAGDSTTIFRYVDW--------ILTVPLMCVEFYLILKA---A--GATT-GH------------LKT-LVWASTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_EU683562 [II-CFB-b] W27_env_samples_EU683562 gi|187711597|gb|EU683562| Uncultured bacterium clone W27 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W27 putative proteorhodopsin gene, partial cds EU683562 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_surface_water_[2m] China Sea marine 31.25 122.42 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAATTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACATTTATCGCTGCCGTTCACTACATGTACATGAGAGATGCTCACGCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGGATTTTAACAGTACCATTAATGTGCGTTGAGTTCTATCTAATTCTTAAAGCTGCAGGTGCTACTACTGGTCATCTAAAAACTTTAGTATGGGCGTCTACTGTAATGCTTGTTACTGGTTACTTTGGTGAA AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAHAAGDSTTIFRYVDWILTVPLMCVEFYLILKAAGATTGHLKTLVWASTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAATTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACATTTATCGCTGCCGTTCACTACATGTACATGAGAGATGCTCAC------------------------------------------------------GCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGG------------------------ATTTTAACAGTACCATTAATGTGCGTTGAGTTCTATCTAATTCTTAAAGCT---------GCA------GGTGCTACTACT---GGTCAT------------------------------------CTAAAAACT---TTAGTATGGGCGTCTACTGTAATGCTTGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAH------------------AAGDSTTIFRYVDW--------ILTVPLMCVEFYLILKA---A--GATT-GH------------LKT-LVWASTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_EU683574 [II-CFB-b] W8024_env_samples_EU683574 gi|187711621|gb|EU683574| Uncultured bacterium clone W8024 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W8024 putative proteorhodopsin gene, partial cds EU683574 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_surface_water_[2m] China Sea marine 30.5 125.52 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAATTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACATTTATCGCTGCCGTTCACTACATGTACATGAGAGATGCTCACGCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGGATTTTAACAGTACCATTAATGTGCGTTGAGTTCTATCTAATTCTTAAAGCTGCAGGTGCTACTACTGGTCATCTAAAAACTTTAGTATGGGCGTCTACTGTAATGCTTGTTACTGGTTACTTTGGTGAA AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAHAAGDSTTIFRYVDWILTVPLMCVEFYLILKAAGATTGHLKTLVWASTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAATTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACATTTATCGCTGCCGTTCACTACATGTACATGAGAGATGCTCAC------------------------------------------------------GCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGG------------------------ATTTTAACAGTACCATTAATGTGCGTTGAGTTCTATCTAATTCTTAAAGCT---------GCA------GGTGCTACTACT---GGTCAT------------------------------------CTAAAAACT---TTAGTATGGGCGTCTACTGTAATGCTTGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAH------------------AAGDSTTIFRYVDW--------ILTVPLMCVEFYLILKA---A--GATT-GH------------LKT-LVWASTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_EU683558 [II-CFB-b] W24_env_samples_EU683558 gi|187711589|gb|EU683558| Uncultured bacterium clone W24 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W24 putative proteorhodopsin gene, partial cds EU683558 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_surface_water_[2m] China Sea marine 31.25 122.42 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAATTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACATTTATCGCTGCCGTTCACTACATGTACATGAGAGATGCTCACGCCGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGGATTTTAACAGTACCATTAATGTGCGTTGAGTTCTATCTAATTCTTAAAGCTGCGGGTGCTACTACTGGTCATCTAAAAACTTTAGTATGGGCGTCTACTGTAATGCTTGTTACTGGTTACTTTGGTGAA AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAHAAGDSTTIFRYVDWILTVPLMCVEFYLILKAAGATTGHLKTLVWASTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAATTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACATTTATCGCTGCCGTTCACTACATGTACATGAGAGATGCTCAC------------------------------------------------------GCCGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGG------------------------ATTTTAACAGTACCATTAATGTGCGTTGAGTTCTATCTAATTCTTAAAGCT---------GCG------GGTGCTACTACT---GGTCAT------------------------------------CTAAAAACT---TTAGTATGGGCGTCTACTGTAATGCTTGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAH------------------AAGDSTTIFRYVDW--------ILTVPLMCVEFYLILKA---A--GATT-GH------------LKT-LVWASTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_EU683563 [II-CFB-b] W28_env_samples_EU683563 gi|187711599|gb|EU683563| Uncultured bacterium clone W28 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W28 putative proteorhodopsin gene, partial cds EU683563 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_surface_water_[2m] China Sea marine 31.25 122.42 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAATTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACATTTATCGCTGCCGTTCACTACATGTACATGAGAGATGCTCACGCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGGATTTTAACAGTACCATTAATGTGCGTTGAGTTCTATCTAATTCTTAAAGCTGCAGGTGCTACTACTGGTCATCTAAAAACTTTAGTATGGGCGTCTACTGTAATGCTTGTTACTGGTTACTTTGGTGAA AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAHAAGDSTTIFRYVDWILTVPLMCVEFYLILKAAGATTGHLKTLVWASTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAATTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACATTTATCGCTGCCGTTCACTACATGTACATGAGAGATGCTCAC------------------------------------------------------GCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGG------------------------ATTTTAACAGTACCATTAATGTGCGTTGAGTTCTATCTAATTCTTAAAGCT---------GCA------GGTGCTACTACT---GGTCAT------------------------------------CTAAAAACT---TTAGTATGGGCGTCTACTGTAATGCTTGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAH------------------AAGDSTTIFRYVDW--------ILTVPLMCVEFYLILKA---A--GATT-GH------------LKT-LVWASTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_EU683541 [II-CFB-b] A9011_02_env_samples_EU683541 gi|187711555|gb|EU683541| Uncultured bacterium clone A9011 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A9011 putative proteorhodopsin gene, partial cds EU683541 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_surface_water_[2m] China Sea marine 22 114 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAATTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTTCCTGGTTTAATTACATTTATCGCTGCCGTTCACTACATGTACATGAGAGATGCTCACGCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGGATTTTAACAGTACCATTAATGTGCGTTGAGTTCTATCTAATTCTTAAAGCTGCAGGTGCTACTACTGGTCATTTAAAAACTTTAGTATGGGCGTCTACTGTAATGCTTGTTACTGGTTACATTGGTGAA AMMAASVFFFLNLNAVDSKWRSSILVPGLITFIAAVHYMYMRDAHAAGDSTTIFRYVDWILTVPLMCVEFYLILKAAGATTGHLKTLVWASTVMLVTGYIGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAATTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTTCCTGGTTTAATTACATTTATCGCTGCCGTTCACTACATGTACATGAGAGATGCTCAC------------------------------------------------------GCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGG------------------------ATTTTAACAGTACCATTAATGTGCGTTGAGTTCTATCTAATTCTTAAAGCT---------GCA------GGTGCTACTACT---GGTCAT------------------------------------TTAAAAACT---TTAGTATGGGCGTCTACTGTAATGCTTGTTACTGGTTACATTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLNLNAVDSKWRSSILVPGLITFIAAVHYMYMRDAH------------------AAGDSTTIFRYVDW--------ILTVPLMCVEFYLILKA---A--GATT-GH------------LKT-LVWASTVMLVTGYIGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_EU683583 [II-CFB-b] W8309_env_samples_EU683583 gi|187711639|gb|EU683583| Uncultured bacterium clone W8309 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W8309 putative proteorhodopsin gene, partial cds EU683583 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_30m_depth China Sea marine 30.5 125.52 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAATTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTCTAGTTTCTGGTTTAATTACATTTATCGCTGCCGTTCACTACATGTACATGAGAGATGCTCACGCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGGATTTTAACAGTACCATTAATGTGCGTTGAGTTCTATCTAATTCTTAAAGCTGCAGGTGCTACTACTGGTCATCTAAAAACTTTAGTATGGGCGTCTACTGTAATGCTTGTTACTGGTTACATTGGTGAA AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAHAAGDSTTIFRYVDWILTVPLMCVEFYLILKAAGATTGHLKTLVWASTVMLVTGYIGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAATTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTCTAGTTTCTGGTTTAATTACATTTATCGCTGCCGTTCACTACATGTACATGAGAGATGCTCAC------------------------------------------------------GCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGG------------------------ATTTTAACAGTACCATTAATGTGCGTTGAGTTCTATCTAATTCTTAAAGCT---------GCA------GGTGCTACTACT---GGTCAT------------------------------------CTAAAAACT---TTAGTATGGGCGTCTACTGTAATGCTTGTTACTGGTTACATTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAH------------------AAGDSTTIFRYVDW--------ILTVPLMCVEFYLILKA---A--GATT-GH------------LKT-LVWASTVMLVTGYIGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_EU683529 [II-CFB-b] A9037_3_env_samples_EU683529 gi|187711531|gb|EU683529| Uncultured bacterium clone A9037 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A9037 putative proteorhodopsin gene, partial cds EU683529 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_surface_water_[2m] China Sea marine 22 114 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAATTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACATTTATCGCTGCCGTTCACTACATGTACATGAGAGATGCTCACGCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGGATTTTAACAGTACCATTAATGTGCGTTGAGTTCTATCTAATTCTTAAAGCTGCAGGTGCTACTACTGGTCATCTAAAAACTTTAGTATGGGCTTCTACTGTAATGCTTGTTACTGGTTACTTTGGTGAA AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAHAAGDSTTIFRYVDWILTVPLMCVEFYLILKAAGATTGHLKTLVWASTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAATTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACATTTATCGCTGCCGTTCACTACATGTACATGAGAGATGCTCAC------------------------------------------------------GCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGG------------------------ATTTTAACAGTACCATTAATGTGCGTTGAGTTCTATCTAATTCTTAAAGCT---------GCA------GGTGCTACTACT---GGTCAT------------------------------------CTAAAAACT---TTAGTATGGGCTTCTACTGTAATGCTTGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAH------------------AAGDSTTIFRYVDW--------ILTVPLMCVEFYLILKA---A--GATT-GH------------LKT-LVWASTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_EU683532 [II-CFB-b] A9048_3_env_samples_EU683532 gi|187711537|gb|EU683532| Uncultured bacterium clone A9048 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A9048 putative proteorhodopsin gene, partial cds EU683532 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_surface_water_[2m] China Sea marine 22 114 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCTGCATCTGTCTTTTTCTTTCTAAACTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTCTCTGGTTTAATTACATTTATTGCTGCCGTTCACTACATGTACATGAGAGATGCTCACGCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGGATTTTAACAGTACCATTAATGTGTGTTGAGTTCTATCTAATTCTTAAAGCTGCAGGTGCTACAACTGGTCATCTTAAAACTTTAGTATGGGCTTCTACTGTAATGCTTGTTACTGGTTACTTTGGTGAA AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAHAAGDSTTIFRYVDWILTVPLMCVEFYLILKAAGATTGHLKTLVWASTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCTGCATCTGTCTTTTTCTTTCTAAACTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTCTCTGGTTTAATTACATTTATTGCTGCCGTTCACTACATGTACATGAGAGATGCTCAC------------------------------------------------------GCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGG------------------------ATTTTAACAGTACCATTAATGTGTGTTGAGTTCTATCTAATTCTTAAAGCT---------GCA------GGTGCTACAACT---GGTCAT------------------------------------CTTAAAACT---TTAGTATGGGCTTCTACTGTAATGCTTGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAH------------------AAGDSTTIFRYVDW--------ILTVPLMCVEFYLILKA---A--GATT-GH------------LKT-LVWASTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_EU683585 [II-CFB-b] W83012_env_samples_EU683585 gi|187711643|gb|EU683585| Uncultured bacterium clone W83012 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W83012 putative proteorhodopsin gene, partial cds EU683585 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_30m_depth China Sea marine 30.5 125.52 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCCGTCTTTTTCTTTCTAAACTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTCTCTGGTTTAATTACATTTATTGCTGCCGTTCACTACATGTACATGAGAGATGCTCACGCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGGATTTTAACAGTACCATTAATGTGTGTTGAGTTCTATCTAATTCTTAAAGCTGCAGGTGCTACAACTGGTCATCTTAAAACTTTAGTATGGGCTTCTACTGTAATGCTTGTTACTGGTTACTTTGGTGAA AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAHAAGDSTTIFRYVDWILTVPLMCVEFYLILKAAGATTGHLKTLVWASTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCCGTCTTTTTCTTTCTAAACTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTCTCTGGTTTAATTACATTTATTGCTGCCGTTCACTACATGTACATGAGAGATGCTCAC------------------------------------------------------GCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGG------------------------ATTTTAACAGTACCATTAATGTGTGTTGAGTTCTATCTAATTCTTAAAGCT---------GCA------GGTGCTACAACT---GGTCAT------------------------------------CTTAAAACT---TTAGTATGGGCTTCTACTGTAATGCTTGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAH------------------AAGDSTTIFRYVDW--------ILTVPLMCVEFYLILKA---A--GATT-GH------------LKT-LVWASTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_EU683609 [II-CFB-b] W87010_env_samples_EU683609 gi|187711691|gb|EU683609| Uncultured bacterium clone W87010 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W87010 putative proteorhodopsin gene, partial cds EU683609 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_70m_depth China Sea marine 30.5 125.52 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAACTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTCTCTGGTTTAATTACATTTATTGCTGCCGCTCACTACATGTACATGAGAGATGCTCACGCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGGATTTTAACAGTACCATTAATGTGTGTTGAGTTCTATCTAATTCTTAAAGCTGCAGGTGCTACAACTGGTCATCTTAAAACTTTAGTATGGGCTTCTACTGTAATGCTTGTTACTGGATACTTTGGTGAA AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAAHYMYMRDAHAAGDSTTIFRYVDWILTVPLMCVEFYLILKAAGATTGHLKTLVWASTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAACTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTCTCTGGTTTAATTACATTTATTGCTGCCGCTCACTACATGTACATGAGAGATGCTCAC------------------------------------------------------GCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGG------------------------ATTTTAACAGTACCATTAATGTGTGTTGAGTTCTATCTAATTCTTAAAGCT---------GCA------GGTGCTACAACT---GGTCAT------------------------------------CTTAAAACT---TTAGTATGGGCTTCTACTGTAATGCTTGTTACTGGATACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAAHYMYMRDAH------------------AAGDSTTIFRYVDW--------ILTVPLMCVEFYLILKA---A--GATT-GH------------LKT-LVWASTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_EU683576 [II-CFB-b] W8029_env_samples_EU683576 gi|187711625|gb|EU683576| Uncultured bacterium clone W8029 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W8029 putative proteorhodopsin gene, partial cds EU683576 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_surface_water_[2m] China Sea marine 30.5 125.52 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAACTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTCTCTGGTTTAATTACATTTATTGCTGCCGTTCACTACATGTACATGAGAGATGCTCACGCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGGATTTTAACAGTACCATTAATGTGTGTTGAGTTCTATCTAATTCTTAAAGCTGCTGGTGCTACAACTGGTCATCTTAAAACTTTAGTATGGGCTTCTACTGTAATGCTTGTTACTGGTTACTTTGGTGAA AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAHAAGDSTTIFRYVDWILTVPLMCVEFYLILKAAGATTGHLKTLVWASTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAACTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTCTCTGGTTTAATTACATTTATTGCTGCCGTTCACTACATGTACATGAGAGATGCTCAC------------------------------------------------------GCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGG------------------------ATTTTAACAGTACCATTAATGTGTGTTGAGTTCTATCTAATTCTTAAAGCT---------GCT------GGTGCTACAACT---GGTCAT------------------------------------CTTAAAACT---TTAGTATGGGCTTCTACTGTAATGCTTGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAH------------------AAGDSTTIFRYVDW--------ILTVPLMCVEFYLILKA---A--GATT-GH------------LKT-LVWASTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_EU683584 [II-CFB-b] W83010_env_samples_EU683584 gi|187711641|gb|EU683584| Uncultured bacterium clone W83010 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W83010 putative proteorhodopsin gene, partial cds EU683584 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_30m_depth China Sea marine 30.5 125.52 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAACTTAAATGCAGTTGACTCAAAATGGGGATCTTCTATTTTAGTCTCTGGTTTAATTACATTTATTGCTGCCGTTCACTACATGTACATGAGAGATGCTCACGCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGGATTTTAACAGTACCATTAATGTGTGTTGAGTTCTATCTAATTCTTAAAGCTGCAGGTGCTACAACTGGTCATCTTAAAACTTTAGTATGGGCTTCTACTGTAATGCTTGTTACTGGTTACTTTGGTGAA AMMAASVFFFLNLNAVDSKWGSSILVSGLITFIAAVHYMYMRDAHAAGDSTTIFRYVDWILTVPLMCVEFYLILKAAGATTGHLKTLVWASTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAACTTAAATGCAGTTGACTCAAAATGGGGATCTTCTATTTTAGTCTCTGGTTTAATTACATTTATTGCTGCCGTTCACTACATGTACATGAGAGATGCTCAC------------------------------------------------------GCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGG------------------------ATTTTAACAGTACCATTAATGTGTGTTGAGTTCTATCTAATTCTTAAAGCT---------GCA------GGTGCTACAACT---GGTCAT------------------------------------CTTAAAACT---TTAGTATGGGCTTCTACTGTAATGCTTGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLNLNAVDSKWGSSILVSGLITFIAAVHYMYMRDAH------------------AAGDSTTIFRYVDW--------ILTVPLMCVEFYLILKA---A--GATT-GH------------LKT-LVWASTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_EU683602 [II-CFB-b] W8702_env_samples_EU683602 gi|187711677|gb|EU683602| Uncultured bacterium clone W8702 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W8702 putative proteorhodopsin gene, partial cds EU683602 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_70m_depth China Sea marine 30.5 125.52 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAACTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTCTCTGGTTTAATTACATTTATTGCTGCCGTTCACTACATGTACATGAGAGATGCTCACGCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGGATTTTAACAGTACCATTAATGTGTGTTGAGTTCTATCTAATTCTTAAAGCTGCAGGTGCTACAACTGGTCATCTTAAAACTTTAGTATGGGCTTCTACTGTAATGCTTGTAACTGGTTACATTGGTGAA AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAHAAGDSTTIFRYVDWILTVPLMCVEFYLILKAAGATTGHLKTLVWASTVMLVTGYIGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAACTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTCTCTGGTTTAATTACATTTATTGCTGCCGTTCACTACATGTACATGAGAGATGCTCAC------------------------------------------------------GCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGG------------------------ATTTTAACAGTACCATTAATGTGTGTTGAGTTCTATCTAATTCTTAAAGCT---------GCA------GGTGCTACAACT---GGTCAT------------------------------------CTTAAAACT---TTAGTATGGGCTTCTACTGTAATGCTTGTAACTGGTTACATTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAH------------------AAGDSTTIFRYVDW--------ILTVPLMCVEFYLILKA---A--GATT-GH------------LKT-LVWASTVMLVTGYIGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_EU683527 [II-CFB-b] A906_3_env_samples_EU683527 gi|187711527|gb|EU683527| Uncultured bacterium clone A906 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A906 putative proteorhodopsin gene, partial cds EU683527 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_surface_water_[2m] China Sea marine 22 114 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAATTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACATTTATTGCTGCCGTTCACTACATGTACATGAGAGATGCTCACGCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGGATTTTAACAGTACCATTAATGTGTGTTGAGTTCTATCTAATTCTTAAAGCTGCAGGTGCTACAACTGGTCATCTTAAAACTTTAGTATGGGCTTCTACTGTAATGCTTGTTACTGGTTACTTTGGTGAA AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAHAAGDSTTIFRYVDWILTVPLMCVEFYLILKAAGATTGHLKTLVWASTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAATTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACATTTATTGCTGCCGTTCACTACATGTACATGAGAGATGCTCAC------------------------------------------------------GCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGG------------------------ATTTTAACAGTACCATTAATGTGTGTTGAGTTCTATCTAATTCTTAAAGCT---------GCA------GGTGCTACAACT---GGTCAT------------------------------------CTTAAAACT---TTAGTATGGGCTTCTACTGTAATGCTTGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAH------------------AAGDSTTIFRYVDW--------ILTVPLMCVEFYLILKA---A--GATT-GH------------LKT-LVWASTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_EU683564 [II-CFB-b] W29_env_samples_EU683564 gi|187711601|gb|EU683564| Uncultured bacterium clone W29 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W29 putative proteorhodopsin gene, partial cds EU683564 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_surface_water_[2m] China Sea marine 31.25 122.42 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAACTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACATTTATCGCTGCCGTTCACTACATGTACATGAGAGATGCTCACGCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGGATTTTAACAGTACCATTAATGTGTGTTGAGTTCTATCTAATTCTTAAAGCTGCAGGTGCTACTACTGGTCATCTTAAAACTTTAGTATGGGCTTCTACTGTAATGCTTGTTACTGGTTACTTTGGTGAA AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAHAAGDSTTIFRYVDWILTVPLMCVEFYLILKAAGATTGHLKTLVWASTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAACTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACATTTATCGCTGCCGTTCACTACATGTACATGAGAGATGCTCAC------------------------------------------------------GCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGG------------------------ATTTTAACAGTACCATTAATGTGTGTTGAGTTCTATCTAATTCTTAAAGCT---------GCA------GGTGCTACTACT---GGTCAT------------------------------------CTTAAAACT---TTAGTATGGGCTTCTACTGTAATGCTTGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAH------------------AAGDSTTIFRYVDW--------ILTVPLMCVEFYLILKA---A--GATT-GH------------LKT-LVWASTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_EU683581 [II-CFB-b] W8306_env_samples_EU683581 gi|187711635|gb|EU683581| Uncultured bacterium clone W8306 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W8306 putative proteorhodopsin gene, partial cds EU683581 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_30m_depth China Sea marine 30.5 125.52 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAACTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACATTTATCGCTGCCGTTCACTACATGTACATGAGAGATGCTCACGCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGGATTCTAACAGTACCATTAATGTGTGTTGAGTTCTATCTAATTCTTAAAGCTGCAGGTGCTACTACTGGTCATCTTAAAACTTTAGTATGGGCTTCTACTGTAATGCTTGTTACTGGTTACTTTGGTGAA AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAHAAGDSTTIFRYVDWILTVPLMCVEFYLILKAAGATTGHLKTLVWASTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAACTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACATTTATCGCTGCCGTTCACTACATGTACATGAGAGATGCTCAC------------------------------------------------------GCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGG------------------------ATTCTAACAGTACCATTAATGTGTGTTGAGTTCTATCTAATTCTTAAAGCT---------GCA------GGTGCTACTACT---GGTCAT------------------------------------CTTAAAACT---TTAGTATGGGCTTCTACTGTAATGCTTGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAH------------------AAGDSTTIFRYVDW--------ILTVPLMCVEFYLILKA---A--GATT-GH------------LKT-LVWASTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_EU683587 [II-CFB-b] W83017_env_samples_EU683587 gi|187711647|gb|EU683587| Uncultured bacterium clone W83017 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W83017 putative proteorhodopsin gene, partial cds EU683587 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_30m_depth China Sea marine 30.5 125.52 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAACTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACATTTATCGCTGCCGTTCACTACATGTACATGAGAGATGCTCACGCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGGATTTTAACAGTACCATTAATGTGTGTTGAGTTCTATCTAATTCTTAAAGCTGCAGGTGCTACTACTGGTCATCTAAAAACCTTAGTATGGGCTTCTACTGTAATGCTTGTTACTGGATCTTTGGTGAAG AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAHAAGDSTTIFRYVDWILTVPLMCVEFYLILKAAGATTGHLKTLVWASTVMLVTGSLVK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAACTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACATTTATCGCTGCCGTTCACTACATGTACATGAGAGATGCTCAC------------------------------------------------------GCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGG------------------------ATTTTAACAGTACCATTAATGTGTGTTGAGTTCTATCTAATTCTTAAAGCT---------GCA------GGTGCTACTACT---GGTCAT------------------------------------CTAAAAACC---TTAGTATGGGCTTCTACTGTAATGCTTGTTACTGGATCTTTGGTGAAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAH------------------AAGDSTTIFRYVDW--------ILTVPLMCVEFYLILKA---A--GATT-GH------------LKT-LVWASTVMLVTGSLVK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_EU683582 [II-CFB-b] W8307_env_samples_EU683582 gi|187711637|gb|EU683582| Uncultured bacterium clone W8307 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W8307 putative proteorhodopsin gene, partial cds EU683582 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_30m_depth China Sea marine 30.5 125.52 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCTGCATCTGTCTTTTTCTTTCTAAACTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACATTTATCGCTGCCGTTCACTACATGTACATGAGAGATGCTCACGCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGGATTTTAACAGTACCATTAATGTGTGTTGAGTTCTATCTAATTCTTAAAGCTGCAGGTGCTACTACTGGTCATCTTAAAACTTTAGTATGGGCTTCTACTGTAATGCTTGTTACTGGTTATTTTGGTGAA AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAHAAGDSTTIFRYVDWILTVPLMCVEFYLILKAAGATTGHLKTLVWASTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCTGCATCTGTCTTTTTCTTTCTAAACTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACATTTATCGCTGCCGTTCACTACATGTACATGAGAGATGCTCAC------------------------------------------------------GCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGG------------------------ATTTTAACAGTACCATTAATGTGTGTTGAGTTCTATCTAATTCTTAAAGCT---------GCA------GGTGCTACTACT---GGTCAT------------------------------------CTTAAAACT---TTAGTATGGGCTTCTACTGTAATGCTTGTTACTGGTTATTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAH------------------AAGDSTTIFRYVDW--------ILTVPLMCVEFYLILKA---A--GATT-GH------------LKT-LVWASTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_EU683566 [II-CFB-b] W212_env_samples_EU683566 gi|187711605|gb|EU683566| Uncultured bacterium clone W212 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W212 putative proteorhodopsin gene, partial cds EU683566 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_surface_water_[2m] China Sea marine 31.25 122.42 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAATTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACATTTATCGCTGCCGTTCACTACATGTACATGAGAGATGCTCACGCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGGATTTTAACAGTACCATTAATGTGCGTTGAGTTCTATCTAATTCTTAAAGCTGCAGGTGCTACTACTGGTCATCTAAAAACTTTAGTATGGGCGTCTACTGTAATGCTTGTAACTGGTTACTTTGGTGAA AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAHAAGDSTTIFRYVDWILTVPLMCVEFYLILKAAGATTGHLKTLVWASTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAATTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACATTTATCGCTGCCGTTCACTACATGTACATGAGAGATGCTCAC------------------------------------------------------GCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGG------------------------ATTTTAACAGTACCATTAATGTGCGTTGAGTTCTATCTAATTCTTAAAGCT---------GCA------GGTGCTACTACT---GGTCAT------------------------------------CTAAAAACT---TTAGTATGGGCGTCTACTGTAATGCTTGTAACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAH------------------AAGDSTTIFRYVDW--------ILTVPLMCVEFYLILKA---A--GATT-GH------------LKT-LVWASTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_EU683568 [II-CFB-b] W809_env_samples_EU683568 gi|187711609|gb|EU683568| Uncultured bacterium clone W809 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W809 putative proteorhodopsin gene, partial cds EU683568 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_surface_water_[2m] China Sea marine 30.5 125.52 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAACTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTCTCTGGTTTAATTACATTTATCGCTGCCGTTCACTACATGTACATGAGAGATGCTCACGCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGGATTTTAACAGTACCATTAATGTGCGTTGAGTTCTATCTAATTCTTAAAGCTGCAGGTGCTACTACTGGTCATCTAAAAACTTTAGTATGGGCGTCTACTGTAATGCTTGTAACTGGTTACTTTGGTGAA AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAHAAGDSTTIFRYVDWILTVPLMCVEFYLILKAAGATTGHLKTLVWASTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAACTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTCTCTGGTTTAATTACATTTATCGCTGCCGTTCACTACATGTACATGAGAGATGCTCAC------------------------------------------------------GCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGG------------------------ATTTTAACAGTACCATTAATGTGCGTTGAGTTCTATCTAATTCTTAAAGCT---------GCA------GGTGCTACTACT---GGTCAT------------------------------------CTAAAAACT---TTAGTATGGGCGTCTACTGTAATGCTTGTAACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAH------------------AAGDSTTIFRYVDW--------ILTVPLMCVEFYLILKA---A--GATT-GH------------LKT-LVWASTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_EU683530 [II-CFB-b] A9038_3_env_samples_EU683530 gi|187711533|gb|EU683530| Uncultured bacterium clone A9038 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A9038 putative proteorhodopsin gene, partial cds EU683530 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_surface_water_[2m] China Sea marine 22 114 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAATTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACATTTATCGCTGCCGTTCACTACATGTACATGAGAGATGCTCACGCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGGATTTTAACAGTACCATTAATGTGCGTTGAGTTCTATCTAATTCTTAAAGCTGCAGGTGCTACTACTGGTCATCTAAAAACTTTAGTATGGGCGTCTACTGTAATGCTTGTTACTGGTTACTTTGGTGAA AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAHAAGDSTTIFRYVDWILTVPLMCVEFYLILKAAGATTGHLKTLVWASTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAATTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACATTTATCGCTGCCGTTCACTACATGTACATGAGAGATGCTCAC------------------------------------------------------GCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGG------------------------ATTTTAACAGTACCATTAATGTGCGTTGAGTTCTATCTAATTCTTAAAGCT---------GCA------GGTGCTACTACT---GGTCAT------------------------------------CTAAAAACT---TTAGTATGGGCGTCTACTGTAATGCTTGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAH------------------AAGDSTTIFRYVDW--------ILTVPLMCVEFYLILKA---A--GATT-GH------------LKT-LVWASTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_EU683559 [II-CFB-b] W210_env_samples_EU683559 gi|187711591|gb|EU683559| Uncultured bacterium clone W210 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W210 putative proteorhodopsin gene, partial cds EU683559 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_surface_water_[2m] China Sea marine 31.25 122.42 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAATTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACATTTATCGCTGCCGTTCACTACATGTACATGAGAGATGCTCACGCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGGATTTTAACAGTACCATTAATGTGCGTTGAGTTCTATCTAATTCTTAAAGCTGCAGGTGCTACTACTGGTCATCTAAAAACTTTAGTATGGGCGTCTACTGTAATGCTTGTTACTGGTTACTTTGGTGAA AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAHAAGDSTTIFRYVDWILTVPLMCVEFYLILKAAGATTGHLKTLVWASTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAATTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACATTTATCGCTGCCGTTCACTACATGTACATGAGAGATGCTCAC------------------------------------------------------GCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGG------------------------ATTTTAACAGTACCATTAATGTGCGTTGAGTTCTATCTAATTCTTAAAGCT---------GCA------GGTGCTACTACT---GGTCAT------------------------------------CTAAAAACT---TTAGTATGGGCGTCTACTGTAATGCTTGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAH------------------AAGDSTTIFRYVDW--------ILTVPLMCVEFYLILKA---A--GATT-GH------------LKT-LVWASTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_EU683605 [II-CFB-b] W8704_env_samples_EU683605 gi|187711683|gb|EU683605| Uncultured bacterium clone W8704 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W8704 putative proteorhodopsin gene, partial cds EU683605 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_70m_depth China Sea marine 30.5 125.52 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAATTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACATTTATCGCTGCCGTTCACTACATGTACATGAGAGATGCTCACGCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGGATTTTAACAGTACCATTAATGTGCGTTGAGTTCTATCTAATTCTTAAAGCTGCAGGTGCTACTACTGGTCATCTAAAAACTTTAGTATGGGCTTCTACTGTAATGCTTGTTACTGGTTACTTTGGTGAA AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAHAAGDSTTIFRYVDWILTVPLMCVEFYLILKAAGATTGHLKTLVWASTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAATTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACATTTATCGCTGCCGTTCACTACATGTACATGAGAGATGCTCAC------------------------------------------------------GCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGG------------------------ATTTTAACAGTACCATTAATGTGCGTTGAGTTCTATCTAATTCTTAAAGCT---------GCA------GGTGCTACTACT---GGTCAT------------------------------------CTAAAAACT---TTAGTATGGGCTTCTACTGTAATGCTTGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAH------------------AAGDSTTIFRYVDW--------ILTVPLMCVEFYLILKA---A--GATT-GH------------LKT-LVWASTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_EU683546 [II-CFB-b] A9017_02_env_samples_EU683546 gi|187711565|gb|EU683546| Uncultured bacterium clone A9017 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A9017 putative proteorhodopsin gene, partial cds EU683546 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_surface_water_[2m] China Sea marine 22 114 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAATTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTTTCTGGTCTAATTACATTTATCGCTGCCGTTCACTACATGTACATGAGAGATGCTCACGCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGGATTTTAACAGTACCATTAATGTGCGTTGAGTTCTATCTAATTCTTAAAGCTGCAGGTGCTACTACTGGTCATCTAAAAACTTTAGTATGGGCCTCTACTGTAATGCTTGTTACTGGATACTTTGGTGAA AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAHAAGDSTTIFRYVDWILTVPLMCVEFYLILKAAGATTGHLKTLVWASTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAATTTAAATGCAGTTGACTCAAAATGGAGATCTTCTATTTTAGTTTCTGGTCTAATTACATTTATCGCTGCCGTTCACTACATGTACATGAGAGATGCTCAC------------------------------------------------------GCTGCTGGTGATAGTACTACAATTTTTAGATATGTAGATTGG------------------------ATTTTAACAGTACCATTAATGTGCGTTGAGTTCTATCTAATTCTTAAAGCT---------GCA------GGTGCTACTACT---GGTCAT------------------------------------CTAAAAACT---TTAGTATGGGCCTCTACTGTAATGCTTGTTACTGGATACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAH------------------AAGDSTTIFRYVDW--------ILTVPLMCVEFYLILKA---A--GATT-GH------------LKT-LVWASTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_EU683561 [II-CFB-b] W23_env_samples_EU683561 gi|187711595|gb|EU683561| Uncultured bacterium clone W23 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W23 putative proteorhodopsin gene, partial cds EU683561 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_surface_water_[2m] China Sea marine 31.25 122.42 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCTGCATCTGTCTTTTTCTTCCTAAATTTAAATGCAGTTGACTCGAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACTTTTATTGCTGCCGTTCACTACATGTACATGAGAGACGCTCATGCTGCTGGTGATAGTACGACTATTTTTAGATATGTAGACTGGATTTTAACTGTACCTCTTATGTGCGTTGAGTTCTATCTTATTCTAAAAGCTGCTGGAGCTACTACAAAACACCTAAAAGTTCTTATTTGGGCTTCTGTAGCTATGCTTGTTACTGGATACATTGGTGAA AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAHAAGDSTTIFRYVDWILTVPLMCVEFYLILKAAGATTKHLKVLIWASVAMLVTGYIGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCTGCATCTGTCTTTTTCTTCCTAAATTTAAATGCAGTTGACTCGAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACTTTTATTGCTGCCGTTCACTACATGTACATGAGAGACGCTCAT------------------------------------------------------GCTGCTGGTGATAGTACGACTATTTTTAGATATGTAGACTGG------------------------ATTTTAACTGTACCTCTTATGTGCGTTGAGTTCTATCTTATTCTAAAAGCT---------GCT------GGAGCTACTACA---AAACAC------------------------------------CTAAAAGTT---CTTATTTGGGCTTCTGTAGCTATGCTTGTTACTGGATACATTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAH------------------AAGDSTTIFRYVDW--------ILTVPLMCVEFYLILKA---A--GATT-KH------------LKV-LIWASVAMLVTGYIGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_EU683575 [II-CFB-b] W8025_env_samples_EU683575 gi|187711623|gb|EU683575| Uncultured bacterium clone W8025 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W8025 putative proteorhodopsin gene, partial cds EU683575 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_surface_water_[2m] China Sea marine 30.5 125.52 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCTGTCTTTTTCTTCCTAAATTTAAATGCAGTTGACTCGAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACTTTTATTGCTGCCGTTCACTACATGTACATGAGAGACGCTCATGCTGCTGGTGATAGTACGACTATTTTTAGATATGTAGACTGGATTTTAACTGTACCTCTTATGTGCGTTGAGTTCTATCTTATTCTAAAAGCTGCTGGAGCTACTACAAAACACCTAAAAGTTCTTATTTGGGCTTCTGTAGCTATGCTTGTTACTGGATACATTGGTGAA AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAHAAGDSTTIFRYVDWILTVPLMCVEFYLILKAAGATTKHLKVLIWASVAMLVTGYIGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCTGTCTTTTTCTTCCTAAATTTAAATGCAGTTGACTCGAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACTTTTATTGCTGCCGTTCACTACATGTACATGAGAGACGCTCAT------------------------------------------------------GCTGCTGGTGATAGTACGACTATTTTTAGATATGTAGACTGG------------------------ATTTTAACTGTACCTCTTATGTGCGTTGAGTTCTATCTTATTCTAAAAGCT---------GCT------GGAGCTACTACA---AAACAC------------------------------------CTAAAAGTT---CTTATTTGGGCTTCTGTAGCTATGCTTGTTACTGGATACATTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAH------------------AAGDSTTIFRYVDW--------ILTVPLMCVEFYLILKA---A--GATT-KH------------LKV-LIWASVAMLVTGYIGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_EU683608 [II-CFB-b] W8709_env_samples_EU683608 gi|187711689|gb|EU683608| Uncultured bacterium clone W8709 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W8709 putative proteorhodopsin gene, partial cds EU683608 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_70m_depth China Sea marine 30.5 125.52 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCTGTCTTTTTCTTCCTAAATTTAAATGCAGTTGACTCGAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACTTTTATTGCTGCCGTTCACTACATGTACATGAGAGACGCTCATGCTGCTGGTGATAGTACGACTATTTTTAGATATGTAGACTGGATTTTAACTGTACCTCTTATGTGCGTTGAGTTCTATCTTATTCTAAAAGCTGCTGGAGCTACTACAAAACACCTAAAAGTTCCTATTTGGGCTTCTGTAGCTATGCTTGTTACTGGTTATATTGGTGAA AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAHAAGDSTTIFRYVDWILTVPLMCVEFYLILKAAGATTKHLKVPIWASVAMLVTGYIGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCTGTCTTTTTCTTCCTAAATTTAAATGCAGTTGACTCGAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACTTTTATTGCTGCCGTTCACTACATGTACATGAGAGACGCTCAT------------------------------------------------------GCTGCTGGTGATAGTACGACTATTTTTAGATATGTAGACTGG------------------------ATTTTAACTGTACCTCTTATGTGCGTTGAGTTCTATCTTATTCTAAAAGCT---------GCT------GGAGCTACTACA---AAACAC------------------------------------CTAAAAGTT---CCTATTTGGGCTTCTGTAGCTATGCTTGTTACTGGTTATATTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAH------------------AAGDSTTIFRYVDW--------ILTVPLMCVEFYLILKA---A--GATT-KH------------LKV-PIWASVAMLVTGYIGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_EU683570 [II-CFB-b] W8017_env_samples_EU683570 gi|187711613|gb|EU683570| Uncultured bacterium clone W8017 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W8017 putative proteorhodopsin gene, partial cds EU683570 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_surface_water_[2m] China Sea marine 30.5 125.52 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAATTTAAATGCAGTTGACTCGAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACTTTTATTGCTGCCGTTCACTACATGTACATGAGAGACGCTCATGCTGCTGGTGATAGTACGACTATTTTTAGATATGTAGACTGGATTTCAACTGTACCTCTTATGTGCGTTGAGTTCTATCTTATTCTAAAAGCTGCTGGAGCTACTACAAAACACCTAAAAGTTCTTATTTGGGCTTCTGTAGCTATGCTTGTTACTGGTTACATTGGTGAA AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAHAAGDSTTIFRYVDWISTVPLMCVEFYLILKAAGATTKHLKVLIWASVAMLVTGYIGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCTGTCTTTTTCTTTCTAAATTTAAATGCAGTTGACTCGAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACTTTTATTGCTGCCGTTCACTACATGTACATGAGAGACGCTCAT------------------------------------------------------GCTGCTGGTGATAGTACGACTATTTTTAGATATGTAGACTGG------------------------ATTTCAACTGTACCTCTTATGTGCGTTGAGTTCTATCTTATTCTAAAAGCT---------GCT------GGAGCTACTACA---AAACAC------------------------------------CTAAAAGTT---CTTATTTGGGCTTCTGTAGCTATGCTTGTTACTGGTTACATTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAH------------------AAGDSTTIFRYVDW--------ISTVPLMCVEFYLILKA---A--GATT-KH------------LKV-LIWASVAMLVTGYIGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_EU683560 [II-CFB-b] W22_env_samples_EU683560 gi|187711593|gb|EU683560| Uncultured bacterium clone W22 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W22 putative proteorhodopsin gene, partial cds EU683560 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_surface_water_[2m] China Sea marine 31.25 122.42 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCTGTCTTTTTCTTCCTAAATTTAAATGCAGTTGACTCGAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACTTTTATTGCTGCCGTTCACTACATGTACATGAGAGACGCTCATGCTGCTGGTGATAGTACGACTATTTTTAGATATGTAGACTGGATTTTAACTGTACCTCTTATGTGCGTTGAGTTCTATCTTATTCTAAAAGCTGCTGGAGCTACTACAAAACACCTAAAAGTTCTTATTTGGGCTTCTGTAGCTATGCTTGTAACTGGTTACTTTGGTGAA AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAHAAGDSTTIFRYVDWILTVPLMCVEFYLILKAAGATTKHLKVLIWASVAMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCTGTCTTTTTCTTCCTAAATTTAAATGCAGTTGACTCGAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACTTTTATTGCTGCCGTTCACTACATGTACATGAGAGACGCTCAT------------------------------------------------------GCTGCTGGTGATAGTACGACTATTTTTAGATATGTAGACTGG------------------------ATTTTAACTGTACCTCTTATGTGCGTTGAGTTCTATCTTATTCTAAAAGCT---------GCT------GGAGCTACTACA---AAACAC------------------------------------CTAAAAGTT---CTTATTTGGGCTTCTGTAGCTATGCTTGTAACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAH------------------AAGDSTTIFRYVDW--------ILTVPLMCVEFYLILKA---A--GATT-KH------------LKV-LIWASVAMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_EU683592 [II-CFB-b] W8505_env_samples_EU683592 gi|187711657|gb|EU683592| Uncultured bacterium clone W8505 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W8505 putative proteorhodopsin gene, partial cds EU683592 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_50m_depth China Sea marine 30.5 125.52 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCTGTCTTTTTCTTCCTAAATTTAAATGCAGTTGACTCGAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACTTTTATTGCTGCCGTTCACTACATGTACATGAGAGACGCTCATGCTGCTGGTGATAGTACGACTATTTTTAGATATGTAGACTGGATTTTAACTGTACCTCTTATGTGCGTTGAGTTCTATCTTATTCTAAAAGCTGCTGGAGCTACTACAAAACACCTAAAAGTTCTTATTTGGGCTTCTGTAGCTATGCTTGTTACTGGTTACTTTGGTGAA AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAHAAGDSTTIFRYVDWILTVPLMCVEFYLILKAAGATTKHLKVLIWASVAMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCTGTCTTTTTCTTCCTAAATTTAAATGCAGTTGACTCGAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACTTTTATTGCTGCCGTTCACTACATGTACATGAGAGACGCTCAT------------------------------------------------------GCTGCTGGTGATAGTACGACTATTTTTAGATATGTAGACTGG------------------------ATTTTAACTGTACCTCTTATGTGCGTTGAGTTCTATCTTATTCTAAAAGCT---------GCT------GGAGCTACTACA---AAACAC------------------------------------CTAAAAGTT---CTTATTTGGGCTTCTGTAGCTATGCTTGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAH------------------AAGDSTTIFRYVDW--------ILTVPLMCVEFYLILKA---A--GATT-KH------------LKV-LIWASVAMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_EU683572 [II-CFB-b] W8010_env_samples_EU683572 gi|187711617|gb|EU683572| Uncultured bacterium clone W8010 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W8010 putative proteorhodopsin gene, partial cds EU683572 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_surface_water_[2m] China Sea marine 30.5 125.52 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCTGTCTTTTTCTTCCTAAATTTAAATGCAGTTGACTCGAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACTTTTATTGCTGCCGTTCACTACATGTACATGAGAGACGCTCATGCTGCTGGTGATAATACGACTATTTTTAGATATGTAGACTGGATTTTAACTGTACCTCTTATGTGCGTTGAGTTCTATCTTATTCTAAAAGCTGCTGGAGCTACTACAAAACACCTAAAAGTTCTTATTTGGGCTTCTGTAGCTATGCTTGTTACTGGTTACTTTGGTGAA AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAHAAGDNTTIFRYVDWILTVPLMCVEFYLILKAAGATTKHLKVLIWASVAMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCTGTCTTTTTCTTCCTAAATTTAAATGCAGTTGACTCGAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACTTTTATTGCTGCCGTTCACTACATGTACATGAGAGACGCTCAT------------------------------------------------------GCTGCTGGTGATAATACGACTATTTTTAGATATGTAGACTGG------------------------ATTTTAACTGTACCTCTTATGTGCGTTGAGTTCTATCTTATTCTAAAAGCT---------GCT------GGAGCTACTACA---AAACAC------------------------------------CTAAAAGTT---CTTATTTGGGCTTCTGTAGCTATGCTTGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAH------------------AAGDNTTIFRYVDW--------ILTVPLMCVEFYLILKA---A--GATT-KH------------LKV-LIWASVAMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_EU683593 [II-CFB-b] W8506_env_samples_EU683593 gi|187711659|gb|EU683593| Uncultured bacterium clone W8506 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W8506 putative proteorhodopsin gene, partial cds EU683593 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_50m_depth China Sea marine 30.5 125.52 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCTGCATCTGTCTTTTTCTTCCTAAATTTAAATGCAGTTGACTCGAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACTTTTATTGCTGCCGTTCACTACATGTACATGAGAGACGCTCATGCTGCTGGTGATAGTACGACTATTTTTAGATATGTAGACTGGATTTTAACTGTACCTCTTATGTGCGTTGAGTTCTATCTTATTCTAAAAGCTGCTGGAGCTACTACAAAACACCTAAAAGTTCTTATTTGGGCTTCTGTAGCTATGCTTGTTACTGGTTACTTTGGTGAA AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAHAAGDSTTIFRYVDWILTVPLMCVEFYLILKAAGATTKHLKVLIWASVAMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCTGCATCTGTCTTTTTCTTCCTAAATTTAAATGCAGTTGACTCGAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACTTTTATTGCTGCCGTTCACTACATGTACATGAGAGACGCTCAT------------------------------------------------------GCTGCTGGTGATAGTACGACTATTTTTAGATATGTAGACTGG------------------------ATTTTAACTGTACCTCTTATGTGCGTTGAGTTCTATCTTATTCTAAAAGCT---------GCT------GGAGCTACTACA---AAACAC------------------------------------CTAAAAGTT---CTTATTTGGGCTTCTGTAGCTATGCTTGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAH------------------AAGDSTTIFRYVDW--------ILTVPLMCVEFYLILKA---A--GATT-KH------------LKV-LIWASVAMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_EU683579 [II-CFB-b] W8304_env_samples_EU683579 gi|187711631|gb|EU683579| Uncultured bacterium clone W8304 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W8304 putative proteorhodopsin gene, partial cds EU683579 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_30m_depth China Sea marine 30.5 125.52 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCTGTCTTTTTCTTCCTAAATTTAAATGCAGTTGACTCGAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACTTTTATTGCTGCCGTTCACTACATGTACATGAGAGACGCTCATGCTGCTGGTGATAGTACGACTATTTTTAGATATGTAGACTGGATTTTAACTGTACCTCTTATGTGCGTTGAGTTCTATCTTATTCTAAAAGCTGTTGGAGCTACTACAAAACACCTAAAAGTTCTTATTTGGGCTTCTGTAGCTATGCTTGTTACTGGATACTTTGGTGAA AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAHAAGDSTTIFRYVDWILTVPLMCVEFYLILKAVGATTKHLKVLIWASVAMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCTGTCTTTTTCTTCCTAAATTTAAATGCAGTTGACTCGAAATGGAGATCTTCTATTTTAGTTTCTGGTTTAATTACTTTTATTGCTGCCGTTCACTACATGTACATGAGAGACGCTCAT------------------------------------------------------GCTGCTGGTGATAGTACGACTATTTTTAGATATGTAGACTGG------------------------ATTTTAACTGTACCTCTTATGTGCGTTGAGTTCTATCTTATTCTAAAAGCT---------GTT------GGAGCTACTACA---AAACAC------------------------------------CTAAAAGTT---CTTATTTGGGCTTCTGTAGCTATGCTTGTTACTGGATACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLNLNAVDSKWRSSILVSGLITFIAAVHYMYMRDAH------------------AAGDSTTIFRYVDW--------ILTVPLMCVEFYLILKA---V--GATT-KH------------LKV-LIWASVAMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_AY599900 [II-CFB-b] Uncultured_bacterium_clone_NA11_R15_8_partial_cds_AY599900 gi|47779412|gb|AY599900| Uncultured bacterium clone NA11 R15 8 proteorhodopsin gene, partial cds Uncultured bacterium clone NA11 R15 8 proteorhodopsin gene, partial cds AY599900 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 #na depth_of_0_m_at_a_station_in_the_North_Atlantic_[59.30N/21.8W]_on_14/6/98 Atlantic Ocean marine 59.3 -21.8 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na CGTCAACTATTAATTTTTAAAATAACAAATATGAATTATTTAAACTTTATTGCAATGTCAGTCCCTACGGATGGCACTGGATTTACGTTCTGGCTTGGAGCGATGGCTATGATGGCAGCATCTGTGTTTTTCTTCTTGTCAATGAACGGTGTTGATGCTAAATGGAGAACTTCTCTTTTAGTTTCAGGATTAATTACATTTATTGCTGCTGTACATTACATGTACATGAGAGATGCTCATGCAGCTGGAGATAGTACTACTGTATTTAGATATGTAGACTGGATCTTAACAGTTCCATTAATGTGTGTTGAGTTTTACTTAATACTTAAAGTTGCTGGAGCGACTAAAACAGATATGTGGAAGCTTATTGGAGCTTCAACTGTAATGCTTGTCACTGGATTCTTTGGAGAGTCTGGATGGGACGGTGGAGTAATGAACGCAGCAATGTGGGGATTATTTTCAGGTCTAGCTTACTTCTGGATTGCATACGAAGTATGGTTCGGTGGTCTTAAGAAATTAGCAGTTGCTGCTGGTGGAAACGTATTAGAAGCTCACAAAATGTTATGTTGGTTCCTTCTTGTTGGTTGGGCAATCTATCCATTAGGATATATGGCTGGTACTGACGGATGGTATTCTGGTATCTCTGCGATACTTCCAGATATGGAAGTAATCTACAACATCGGTGATGCTGTCAACAAAATCGGATTTGGTCTTGTTGTATACAGTTTAGCTGTTAAAGAATCTTCTAATGCTAAT RQLLIFKITNMNYLNFIAMSVPTDGTGFTFWLGAMAMMAASVFFFLSMNGVDAKWRTSLLVSGLITFIAAVHYMYMRDAHAAGDSTTVFRYVDWILTVPLMCVEFYLILKVAGATKTDMWKLIGASTVMLVTGFFGESGWDGGVMNAAMWGLFSGLAYFWIAYEVWFGGLKKLAVAAGGNVLEAHKMLCWFLLVGWAIYPLGYMAGTDGWYSGISAILPDMEVIYNIGDAVNKIGFGLVVYSLAVKESSNAN ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTCAACTATTAATTTTTAAAATAACAAATATGAATTATTTAAACTTTATTGCAATGTCAGTCCCTACGGATGGCACTGGATTTACGTTCTGGCTTGGAGCGATGGCTATGATGGCAGCATCTGTGTTTTTCTTCTTGTCAATGAACGGTGTTGATGCTAAATGGAGAACTTCTCTTTTAGTTTCAGGATTAATTACATTTATTGCTGCTGTACATTACATGTACATGAGAGATGCTCAT------------------------------------------------------GCAGCTGGAGATAGTACTACTGTATTTAGATATGTAGACTGG------------------------ATCTTAACAGTTCCATTAATGTGTGTTGAGTTTTACTTAATACTTAAAGTT---------GCT------GGAGCGACTAAA---ACAGAT------------------------------------ATGTGGAAG---CTTATTGGAGCTTCAACTGTAATGCTTGTCACTGGATTCTTTGGAGAG---------TCT------------------GGA------TGGGAC---------------------------------------GGT------------GGA---------GTA---------------------------ATGAACGCA------------------GCAATGTGG---GGATTATTTTCAGGTCTAGCTTACTTCTGGATTGCATACGAAGTA---------------TGG------TTC---GGTGGTCTTAAGAAATTAGCAGTTGCT------GCT---GGTGGAAAC---GTA---TTA---GAA---GCT---CAC---AAA---ATGTTA---TGTTGGTTCCTTCTTGTT---------------------------------------------------------------GGTTGG---------GCAATCTATCCATTAGGATATATGGCTGGTACTGACGGA---TGGTAT---------TCT---GGTATCTCTGCGATACTTCCA---------GATATGGAAGTAATCTACAACATCGGTGATGCTGTCAACAAAATCGGATTTGGTCTTGTTGTATACAGTTTAGCTGTTAAAGAATCTTCTAATGCTAAT------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------RQLLIFKITNMNYLNFIAMSVPTDGTGFTFWLGAMAMMAASVFFFLSMNGVDAKWRTSLLVSGLITFIAAVHYMYMRDAH------------------AAGDSTTVFRYVDW--------ILTVPLMCVEFYLILKV---A--GATK-TD------------MWK-LIGASTVMLVTGFFGE---S------G--WD-------------G----G---V---------MNA------AMW-GLFSGLAYFWIAYEV-----W--F-GGLKKLAVA--A-GGN-V-L-E-A-H-K-ML-CWFLLV---------------------GW---AIYPLGYMAGTDG-WY---S-GISAILP---DMEVIYNIGDAVNKIGFGLVVYSLAVKESSNAN-------------------------------------- [II-CFB-b]_AY599906 [II-CFB-b] Uncultured_bacterium_clone_NA37_R15_5_partial_cds_AY599906 gi|47779420|gb|AY599906| Uncultured bacterium clone NA37 R15 5 proteorhodopsin gene, partial cds Uncultured bacterium clone NA37 R15 5 proteorhodopsin gene, partial cds AY599906 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 #na depth_of_0_m_at_a_station_in_the_North_Atlantic_[59.34N/21.3W]_on_21/6/98 Atlantic Ocean marine 59.34 -21.3 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na CGTCAACTATTAATTTTTAAAATAACAAATATGAATTATTTAAACTTTATTGCAATGTCAGTCCCTACGGATGGCACTGGATTTACGTTCTGGCTTGGAGCGATGGCTATGATGGCAGCATCTGTGTTTTTCTTCTTGTCAATGAACGGTGTTGATGCTAAATGGAGAACTTCTCTTTTAGTTTCAGGATTAATTACATTTATTGCTGCTGTACATTACATGTACATGAGAGATGCTCATGCAGCTGGAGATAGTACTACTGTATTTAGATATGTAGACTGGATCTTAACAGTTCCATTAATGTGTGTTGAGTTTTACTTAATACTTAAAGTTGCTGGAGCGACTAAAACAGATATGTGGAAGCTTATTGGAGCTTCAACTGTAATGCTTGTCACTGGATTCTTTGGAGAGTCTGGATGGGACGGTGGAGTAATGAACGCAGCAATGTGGGGATTATTTTCAGGTCTAGCTTACTTCTGGATTGCATACGAAGTATGGTTCGGTGGTCTTAAGAAATTAGCAGTTGCTGCTGGTGGAAACGTATTAGAAGCTCACAAAATGTTATGTTGGTTCCTTCTTGTTGGTTGGGCAATCTATCCATTAGGATATATGGCTGGCACTGACGGATGGTATTCTGGTATCTCTGCGATACTTCCAGATATGGAAGTAATCTACAACATCGGTGATGCTGTCAACAAAATCGGATTTGGTCTTGTTGTATACAGTTTAGCTGTTAAAGAATCTTCTAATGCT RQLLIFKITNMNYLNFIAMSVPTDGTGFTFWLGAMAMMAASVFFFLSMNGVDAKWRTSLLVSGLITFIAAVHYMYMRDAHAAGDSTTVFRYVDWILTVPLMCVEFYLILKVAGATKTDMWKLIGASTVMLVTGFFGESGWDGGVMNAAMWGLFSGLAYFWIAYEVWFGGLKKLAVAAGGNVLEAHKMLCWFLLVGWAIYPLGYMAGTDGWYSGISAILPDMEVIYNIGDAVNKIGFGLVVYSLAVKESSNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTCAACTATTAATTTTTAAAATAACAAATATGAATTATTTAAACTTTATTGCAATGTCAGTCCCTACGGATGGCACTGGATTTACGTTCTGGCTTGGAGCGATGGCTATGATGGCAGCATCTGTGTTTTTCTTCTTGTCAATGAACGGTGTTGATGCTAAATGGAGAACTTCTCTTTTAGTTTCAGGATTAATTACATTTATTGCTGCTGTACATTACATGTACATGAGAGATGCTCAT------------------------------------------------------GCAGCTGGAGATAGTACTACTGTATTTAGATATGTAGACTGG------------------------ATCTTAACAGTTCCATTAATGTGTGTTGAGTTTTACTTAATACTTAAAGTT---------GCT------GGAGCGACTAAA---ACAGAT------------------------------------ATGTGGAAG---CTTATTGGAGCTTCAACTGTAATGCTTGTCACTGGATTCTTTGGAGAG---------TCT------------------GGA------TGGGAC---------------------------------------GGT------------GGA---------GTA---------------------------ATGAACGCA------------------GCAATGTGG---GGATTATTTTCAGGTCTAGCTTACTTCTGGATTGCATACGAAGTA---------------TGG------TTC---GGTGGTCTTAAGAAATTAGCAGTTGCT------GCT---GGTGGAAAC---GTA---TTA---GAA---GCT---CAC---AAA---ATGTTA---TGTTGGTTCCTTCTTGTT---------------------------------------------------------------GGTTGG---------GCAATCTATCCATTAGGATATATGGCTGGCACTGACGGA---TGGTAT---------TCT---GGTATCTCTGCGATACTTCCA---------GATATGGAAGTAATCTACAACATCGGTGATGCTGTCAACAAAATCGGATTTGGTCTTGTTGTATACAGTTTAGCTGTTAAAGAATCTTCTAATGCT--------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------RQLLIFKITNMNYLNFIAMSVPTDGTGFTFWLGAMAMMAASVFFFLSMNGVDAKWRTSLLVSGLITFIAAVHYMYMRDAH------------------AAGDSTTVFRYVDW--------ILTVPLMCVEFYLILKV---A--GATK-TD------------MWK-LIGASTVMLVTGFFGE---S------G--WD-------------G----G---V---------MNA------AMW-GLFSGLAYFWIAYEV-----W--F-GGLKKLAVA--A-GGN-V-L-E-A-H-K-ML-CWFLLV---------------------GW---AIYPLGYMAGTDG-WY---S-GISAILP---DMEVIYNIGDAVNKIGFGLVVYSLAVKESSNA--------------------------------------- [II-CFB-b]_AY599903 [II-CFB-b] Uncultured_bacterium_clone_NA13_R15_12_partial_cds_AY599903 gi|47779416|gb|AY599903| Uncultured bacterium clone NA13 R15 12 proteorhodopsin gene, partial cds Uncultured bacterium clone NA13 R15 12 proteorhodopsin gene, partial cds AY599903 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 #na depth_of_40_m_at_a_station_in_the_North_Atlantic_[59.30N/21.8W]_on_14/6/98 Atlantic Ocean marine 59.3 -21.8 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na CGTCAACTATTAATTTTTAAAATAACAAATATGAATTATTTAAACTTTATTGCAATGTCAGTCCCTACGGATGGCACTGGATTTACGTTCTGGCTTGGAGCGATGGCTATGATGGCAGCATCTGTGTTTTTCTTCTTGTCAATGAACGGTGTTGATGCTAAATGGAGAACTTCTCTTTTGGTTTCAGGATTAATTACATTTATTGCTGCTGTACATTACATGTACATGAGAGATGCTCATGCAGCTGGAGATAGTACTACTGTATTTAGATATGTAGACTGGATCTTAACAGTTCCATTAATGTGTGTTGAGTTTTACTTAATACTTAAAGTTGCTGGAGCGACTAAAACAGATATGTGGAAGCTTATTGGAGCTTCAACTGTAATGCTTGTCACTGGATTCTTTGGAGAGTCTGGATGGGACGGTGGAGTAATGAACGCAGCAATGTGGGGATTACTTTCAGGTCTAGCTTACTTCTGGATTGCATACGAAGTATGGTTCGGTGGTCTTAAGAAATTAGCAGTTGCTGCTGGTGGAAACGTATTAGAAGCTCACAAAATGTTATGTTGGTTCCTTCTTGTTGGTTGGGCAATCTATCCATTAGGATATATGGCTGGTACTGACGGATGGTATTCTGGTATCTCTGCGATACTTCCAGATATGGAAGTAATCTACAACATCGGTGATGCTGTCAACAAAATCGGATTTGGTCTTGTTGTATACAGTTTAGCTGTTAAAGAATCTTCTAATGCT RQLLIFKITNMNYLNFIAMSVPTDGTGFTFWLGAMAMMAASVFFFLSMNGVDAKWRTSLLVSGLITFIAAVHYMYMRDAHAAGDSTTVFRYVDWILTVPLMCVEFYLILKVAGATKTDMWKLIGASTVMLVTGFFGESGWDGGVMNAAMWGLLSGLAYFWIAYEVWFGGLKKLAVAAGGNVLEAHKMLCWFLLVGWAIYPLGYMAGTDGWYSGISAILPDMEVIYNIGDAVNKIGFGLVVYSLAVKESSNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTCAACTATTAATTTTTAAAATAACAAATATGAATTATTTAAACTTTATTGCAATGTCAGTCCCTACGGATGGCACTGGATTTACGTTCTGGCTTGGAGCGATGGCTATGATGGCAGCATCTGTGTTTTTCTTCTTGTCAATGAACGGTGTTGATGCTAAATGGAGAACTTCTCTTTTGGTTTCAGGATTAATTACATTTATTGCTGCTGTACATTACATGTACATGAGAGATGCTCAT------------------------------------------------------GCAGCTGGAGATAGTACTACTGTATTTAGATATGTAGACTGG------------------------ATCTTAACAGTTCCATTAATGTGTGTTGAGTTTTACTTAATACTTAAAGTT---------GCT------GGAGCGACTAAA---ACAGAT------------------------------------ATGTGGAAG---CTTATTGGAGCTTCAACTGTAATGCTTGTCACTGGATTCTTTGGAGAG---------TCT------------------GGA------TGGGAC---------------------------------------GGT------------GGA---------GTA---------------------------ATGAACGCA------------------GCAATGTGG---GGATTACTTTCAGGTCTAGCTTACTTCTGGATTGCATACGAAGTA---------------TGG------TTC---GGTGGTCTTAAGAAATTAGCAGTTGCT------GCT---GGTGGAAAC---GTA---TTA---GAA---GCT---CAC---AAA---ATGTTA---TGTTGGTTCCTTCTTGTT---------------------------------------------------------------GGTTGG---------GCAATCTATCCATTAGGATATATGGCTGGTACTGACGGA---TGGTAT---------TCT---GGTATCTCTGCGATACTTCCA---------GATATGGAAGTAATCTACAACATCGGTGATGCTGTCAACAAAATCGGATTTGGTCTTGTTGTATACAGTTTAGCTGTTAAAGAATCTTCTAATGCT--------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------RQLLIFKITNMNYLNFIAMSVPTDGTGFTFWLGAMAMMAASVFFFLSMNGVDAKWRTSLLVSGLITFIAAVHYMYMRDAH------------------AAGDSTTVFRYVDW--------ILTVPLMCVEFYLILKV---A--GATK-TD------------MWK-LIGASTVMLVTGFFGE---S------G--WD-------------G----G---V---------MNA------AMW-GLLSGLAYFWIAYEV-----W--F-GGLKKLAVA--A-GGN-V-L-E-A-H-K-ML-CWFLLV---------------------GW---AIYPLGYMAGTDG-WY---S-GISAILP---DMEVIYNIGDAVNKIGFGLVVYSLAVKESSNA--------------------------------------- [II-CFB-b]_AY599897 [II-CFB-b] Uncultured_bacterium_clone_NA13_R8_9_partial_cds_AY599897 gi|47779406|gb|AY599897| Uncultured bacterium clone NA13 R8 9 proteorhodopsin gene, partial cds Uncultured bacterium clone NA13 R8 9 proteorhodopsin gene, partial cds AY599897 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 #na depth_of_40_m_at_a_station_in_the_North_Atlantic_[59.30N/21.8W]_on_14/6/98 Atlantic Ocean marine 59.3 -21.8 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na CGTCAACTATCAATTTTTAAAATAACAAATATGAATTATTTAAACTTTATTGCAATGTCAGTCCCTACGGATGGCACTGGATTTACGTCCTGGCTTGGAGCGATGGCTATGATGGCAGCATCTGTGTTTTTCTTCTTGTCAATGAACGGTGTTGATGCTAAATGGAGAACTTCTCTTTTAGTTTCAGGATTAATTACATTTATTGCTGCTGTACATTACATGTACATGAGAGATGCTCATGCAGCTGGAGATAGTACTACTGTTTTTAGATATGTAGACTGGGTCCTAACAGTTCCATTAATGTGTGTTGAGTTTTACTTAATACTTAAAGTTGCTGGAGCGACTAAAACAGATATGTGGAAGCTTATTGGGGCTTCAACTGTAATGCTTGTCACTGGATTCTTTGGAGAGTCTGGATGGGACGGTGGAGTAATGAACGCAGCAATGTGGGGATTACTTTCAGGTCTAGCTTACTCCTGGATTGCATACGAAGTATGGTTCGGTGGTCTTAAGAAATTAGCAGTTGCTGCTGGTGGAAACGTATTAGAAGCTCACAAAATGTTATGTTGGTTCCTTCTTGTTGGTTGGGCAATCTATCCATTAGGATATATGGCTGGTACTGACGGATGGTATTCTGGTATCTCTGCGATACTACCAGATATGGAAGTAATCTACAACATCGGTGATGCTGTCAACAAAATCGGATTTGGTCTTGTTGTATACAGTTTAGCTGTTAAAGAATCTTCTAATGCT RQLSIFKITNMNYLNFIAMSVPTDGTGFTSWLGAMAMMAASVFFFLSMNGVDAKWRTSLLVSGLITFIAAVHYMYMRDAHAAGDSTTVFRYVDWVLTVPLMCVEFYLILKVAGATKTDMWKLIGASTVMLVTGFFGESGWDGGVMNAAMWGLLSGLAYSWIAYEVWFGGLKKLAVAAGGNVLEAHKMLCWFLLVGWAIYPLGYMAGTDGWYSGISAILPDMEVIYNIGDAVNKIGFGLVVYSLAVKESSNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTCAACTATCAATTTTTAAAATAACAAATATGAATTATTTAAACTTTATTGCAATGTCAGTCCCTACGGATGGCACTGGATTTACGTCCTGGCTTGGAGCGATGGCTATGATGGCAGCATCTGTGTTTTTCTTCTTGTCAATGAACGGTGTTGATGCTAAATGGAGAACTTCTCTTTTAGTTTCAGGATTAATTACATTTATTGCTGCTGTACATTACATGTACATGAGAGATGCTCAT------------------------------------------------------GCAGCTGGAGATAGTACTACTGTTTTTAGATATGTAGACTGG------------------------GTCCTAACAGTTCCATTAATGTGTGTTGAGTTTTACTTAATACTTAAAGTT---------GCT------GGAGCGACTAAA---ACAGAT------------------------------------ATGTGGAAG---CTTATTGGGGCTTCAACTGTAATGCTTGTCACTGGATTCTTTGGAGAG---------TCT------------------GGA------TGGGAC---------------------------------------GGT------------GGA---------GTA---------------------------ATGAACGCA------------------GCAATGTGG---GGATTACTTTCAGGTCTAGCTTACTCCTGGATTGCATACGAAGTA---------------TGG------TTC---GGTGGTCTTAAGAAATTAGCAGTTGCT------GCT---GGTGGAAAC---GTA---TTA---GAA---GCT---CAC---AAA---ATGTTA---TGTTGGTTCCTTCTTGTT---------------------------------------------------------------GGTTGG---------GCAATCTATCCATTAGGATATATGGCTGGTACTGACGGA---TGGTAT---------TCT---GGTATCTCTGCGATACTACCA---------GATATGGAAGTAATCTACAACATCGGTGATGCTGTCAACAAAATCGGATTTGGTCTTGTTGTATACAGTTTAGCTGTTAAAGAATCTTCTAATGCT--------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------RQLSIFKITNMNYLNFIAMSVPTDGTGFTSWLGAMAMMAASVFFFLSMNGVDAKWRTSLLVSGLITFIAAVHYMYMRDAH------------------AAGDSTTVFRYVDW--------VLTVPLMCVEFYLILKV---A--GATK-TD------------MWK-LIGASTVMLVTGFFGE---S------G--WD-------------G----G---V---------MNA------AMW-GLLSGLAYSWIAYEV-----W--F-GGLKKLAVA--A-GGN-V-L-E-A-H-K-ML-CWFLLV---------------------GW---AIYPLGYMAGTDG-WY---S-GISAILP---DMEVIYNIGDAVNKIGFGLVVYSLAVKESSNA--------------------------------------- [II-CFB-b]_AY599898 [II-CFB-b] Uncultured_bacterium_clone_NA39_R14_12_partial_cds_AY599898 gi|47779408|gb|AY599898| Uncultured bacterium clone NA39 R14 12 proteorhodopsin gene, partial cds Uncultured bacterium clone NA39 R14 12 proteorhodopsin gene, partial cds AY599898 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 #na depth_of_40_m_at_a_station_in_the_North_Atlantic_[59.34N/21.3W]_on_21/6/98 Atlantic Ocean marine 59.34 -21.3 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na CGTCAACTATTAATTTTTAAAATAACAAATATGAATTATTTAAACTTTATTGCAATGTCAGTCCCTACGGATGGCACTGGATTTACGTTCTGGCTTGGAGCGATGGCTATGATGGCAGCATCTGTGTTTTTCTTCTTGTCAATGAACGGCGTTGATGCTAAATGGAGAACTTCTCTTTTGGTTTCAGGATTAATTACATTTATTGCTGCTGTACATTACATGTACATGAGAGATGCTCATGCAGCTGGAGATAGTACTACTGTATTTAGATATGTAGACTGGATCTTAACAGTTCCATTAATGTGTGTTGAGTTTTACTTAATACTTAAAGTTGCTGGAGCGACTAAAACAGATATGTGGAGGCTTATTGGAGCTTCAACTGTAATGCTTGTCACTGGATTCTTTGGAGAGTCTGGATGGGACGGTGGAGTAATGAACGCAGCAATGTGGGGATTACTTTCAGGTCTAGCTTACTTCTGGATTGCATACGAAGTATGGTTCGGTGGTCTTAAGAAATTAGCAGTTGCTGCTGGTGGAAACGTATTAGAAGCTCACAAAATGTTATGTTGGTTCCTTCTTGTTGGTTGGGCAATCTATCCATTAGGATATATGGCTGGTACTGACGGATGGTATTCTGGTATCTCTGCGATACTTCCAGATATGGAAGTAATCTACAACATCGGTGATGCTGTCAACAAAATCGGATTTGGTCTTGTTGTATACAGTTTAGCTGTTAAAGAATCTTCTAATGCT RQLLIFKITNMNYLNFIAMSVPTDGTGFTFWLGAMAMMAASVFFFLSMNGVDAKWRTSLLVSGLITFIAAVHYMYMRDAHAAGDSTTVFRYVDWILTVPLMCVEFYLILKVAGATKTDMWRLIGASTVMLVTGFFGESGWDGGVMNAAMWGLLSGLAYFWIAYEVWFGGLKKLAVAAGGNVLEAHKMLCWFLLVGWAIYPLGYMAGTDGWYSGISAILPDMEVIYNIGDAVNKIGFGLVVYSLAVKESSNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTCAACTATTAATTTTTAAAATAACAAATATGAATTATTTAAACTTTATTGCAATGTCAGTCCCTACGGATGGCACTGGATTTACGTTCTGGCTTGGAGCGATGGCTATGATGGCAGCATCTGTGTTTTTCTTCTTGTCAATGAACGGCGTTGATGCTAAATGGAGAACTTCTCTTTTGGTTTCAGGATTAATTACATTTATTGCTGCTGTACATTACATGTACATGAGAGATGCTCAT------------------------------------------------------GCAGCTGGAGATAGTACTACTGTATTTAGATATGTAGACTGG------------------------ATCTTAACAGTTCCATTAATGTGTGTTGAGTTTTACTTAATACTTAAAGTT---------GCT------GGAGCGACTAAA---ACAGAT------------------------------------ATGTGGAGG---CTTATTGGAGCTTCAACTGTAATGCTTGTCACTGGATTCTTTGGAGAG---------TCT------------------GGA------TGGGAC---------------------------------------GGT------------GGA---------GTA---------------------------ATGAACGCA------------------GCAATGTGG---GGATTACTTTCAGGTCTAGCTTACTTCTGGATTGCATACGAAGTA---------------TGG------TTC---GGTGGTCTTAAGAAATTAGCAGTTGCT------GCT---GGTGGAAAC---GTA---TTA---GAA---GCT---CAC---AAA---ATGTTA---TGTTGGTTCCTTCTTGTT---------------------------------------------------------------GGTTGG---------GCAATCTATCCATTAGGATATATGGCTGGTACTGACGGA---TGGTAT---------TCT---GGTATCTCTGCGATACTTCCA---------GATATGGAAGTAATCTACAACATCGGTGATGCTGTCAACAAAATCGGATTTGGTCTTGTTGTATACAGTTTAGCTGTTAAAGAATCTTCTAATGCT--------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------RQLLIFKITNMNYLNFIAMSVPTDGTGFTFWLGAMAMMAASVFFFLSMNGVDAKWRTSLLVSGLITFIAAVHYMYMRDAH------------------AAGDSTTVFRYVDW--------ILTVPLMCVEFYLILKV---A--GATK-TD------------MWR-LIGASTVMLVTGFFGE---S------G--WD-------------G----G---V---------MNA------AMW-GLLSGLAYFWIAYEV-----W--F-GGLKKLAVA--A-GGN-V-L-E-A-H-K-ML-CWFLLV---------------------GW---AIYPLGYMAGTDG-WY---S-GISAILP---DMEVIYNIGDAVNKIGFGLVVYSLAVKESSNA--------------------------------------- [II-CFB-b]_AY599902 [II-CFB-b] clone_NA13_R15_7_AY599902 gi|47834986|gb|AY599902| Uncultured bacterium clone NA13 R15 7 proteorhodopsin gene, partial cds. Uncultured bacterium clone NA13 R15 7 proteorhodopsin gene, partial cds. AY599902 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 11-juil-05 #na depth of 40 m at a station in the North Atlantic (59.30N,21.8W) on 14/6/98 Atlantic Ocean marine 59.3 -21.8 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na CTATTAATTTTTAAAATAACAAATATGAATTATTTAAACTTTATTGCAATGTCAGTCCCTACGGATGGCACTGGATTTACGTTCTGGCTTGGAGCGATGGCTATGATGGCAGCATCTGTGTTTTTCTTCTTGTCAATGAACGGTGTTGATGCTAAATGGAGAACTTCTCTTTTAGTTTCAGGATTAATTACATTTATTGCTGCTGTACACTACATGTACATGAGAGATGCTCATGCAGCTGGAGATAGTACTACTGTATTTAGATATGTAGACTGGATCTTAACAGTTCCATTAATGTGTGTTGAGTTTTACTTAATACTTAAGGTTGCTGGAGCTACTAAAACTGATATGTGGAGACTTATTGGTGCTTCTACTTTAATGTTAGTTACTGGATTCTTTGGTGAGTCTGGATGGGACAATGGAGCTTTATCTCCTGCATTATGGGGAGCACTTTCAGGTGCAGCTTACTTCTGGATTGCATACGAAGTATGGTTAGGTGGTCTTAAGAAACTAGCAGTTGCTGCTGGTGGAAATGTACTAGCTGCTCACAAAACTTTATGTTGGTTCCTTCTTGTTGGTTGGGCAATATATCCTGTAGGATATATGGCTGGAACAGCTGGATGGTACGGTGATGCAGGTCTTTTATTTGGTATGGATGTATCAATGGAAGTAATCTACAACATTGGTGATGCTGTCAACAAAATCGGATTCGGTCTTGTTGTATACAGTTTAGCTGTTAAAGAATCTTCTAATGCTA LLIFKITNMNYLNFIAMSVPTDGTGFTFWLGAMAMMAASVFFFLSMNGVDAKWRTSLLVSGLITFIAAVHYMYMRDAHAAGDSTTVFRYVDWILTVPLMCVEFYLILKVAGATKTDMWRLIGASTLMLVTGFFGESGWDNGALSPALWGALSGAAYFWIAYEVWLGGLKKLAVAAGGNVLAAHKTLCWFLLVGWAIYPVGYMAGTAGWYGDAGLLFGMDVSMEVIYNIGDAVNKIGFGLVVYSLAVKESSNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAATTTTTAAAATAACAAATATGAATTATTTAAACTTTATTGCAATGTCAGTCCCTACGGATGGCACTGGATTTACGTTCTGGCTTGGAGCGATGGCTATGATGGCAGCATCTGTGTTTTTCTTCTTGTCAATGAACGGTGTTGATGCTAAATGGAGAACTTCTCTTTTAGTTTCAGGATTAATTACATTTATTGCTGCTGTACACTACATGTACATGAGAGATGCTCAT------------------------------------------------------GCAGCTGGAGATAGTACTACTGTATTTAGATATGTAGACTGG------------------------ATCTTAACAGTTCCATTAATGTGTGTTGAGTTTTACTTAATACTTAAGGTT---------GCT------GGAGCTACTAAA---ACTGAT------------------------------------ATGTGGAGA---CTTATTGGTGCTTCTACTTTAATGTTAGTTACTGGATTCTTTGGTGAG---------TCT------------------GGA------TGGGAC---------------------------------------AAT------------GGA---------GCT---------------------------TTATCTCCT------------------GCATTATGG---GGAGCACTTTCAGGTGCAGCTTACTTCTGGATTGCATACGAAGTA---------------TGG------TTA---GGTGGTCTTAAGAAACTAGCAGTTGCT------GCT---GGTGGAAAT---GTA---CTA---GCT---GCT---CAC---AAA---ACTTTA---TGTTGGTTCCTTCTTGTT---------------------------------------------------------------GGTTGG---------GCAATATATCCTGTAGGATATATGGCTGGAACAGCTGGA---TGGTAC---------GGT---GATGCAGGTCTTTTATTTGGTATGGATGTATCAATGGAAGTAATCTACAACATTGGTGATGCTGTCAACAAAATCGGATTCGGTCTTGTTGTATACAGTTTAGCTGTTAAAGAATCTTCTAATGCT--------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------LLIFKITNMNYLNFIAMSVPTDGTGFTFWLGAMAMMAASVFFFLSMNGVDAKWRTSLLVSGLITFIAAVHYMYMRDAH------------------AAGDSTTVFRYVDW--------ILTVPLMCVEFYLILKV---A--GATK-TD------------MWR-LIGASTLMLVTGFFGE---S------G--WD-------------N----G---A---------LSP------ALW-GALSGAAYFWIAYEV-----W--L-GGLKKLAVA--A-GGN-V-L-A-A-H-K-TL-CWFLLV---------------------GW---AIYPVGYMAGTAG-WY---G-DAGLLFGMDVSMEVIYNIGDAVNKIGFGLVVYSLAVKESSNA--------------------------------------- [II-CFB-b]_AY599907 [II-CFB-b] clone_NA37_R15_7_AY599907 gi|47834990|gb|AY599907| Uncultured bacterium clone NA37 R15 7 proteorhodopsin gene, partial cds. Uncultured bacterium clone NA37 R15 7 proteorhodopsin gene, partial cds. AY599907 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 11-juil-05 #na depth of 0 m at a station in the North Atlantic (59.34N,21.3W) on 21/6/98 Atlantic Ocean marine 59.34 -21.3 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na CTATTAATTTTTAAAATAACAAATATGAATTATTTAAACTTTATTGCAATGTCAGTCCCTACGGATGGCACTGGATTTACGTTCTGGCTTGGAGCGATGGCTATGATGGCAGCATCTGTGTTTTTCTTCTTGTCAATGAACGGTGTTGATGCTAAATGGAGAACTTCTCTTTTAGTTTCAGGATTAATTACATTTATTGCTGCTGTACACTGCATGTACATGAGAGATGCTCATGCAGCTGGAGATAGTACTACTGTATTTAGATATGTAGACTGGATCTTAACAGTTCCATTAATGTGTGTTGAGTTTTACTTAATACTTAAGGTTGCTGGAGCTACTGAAACTGATATGTGGAGACTTATTGGTGCTTCTACTTTAATGTTAGTTACTGGATTCTTTGGTGAGTCTGGATGGGACAATGGAGCTTTATCTCCTGCATTATGGGGAGCACTTTCAGGTGCAGCTTACTTCTGGATTGCATACGAAGTATGGTTAGGTGGTCTTAAGAAACTAGCAGTTGCTGCTGGTGGAAATGTACTAGCTGCTCACAAGACTTTATGTTGGTTCCTTCTTGTTGGTTGGGCAATATATCCTGTAGGATATATGGCTGGAACAGCTGGATGGTACGGTGATGCAGGTCTTTTATTTGGTATGGATGTATCAATGGAAGTAATCTACAACATTGGTGATGCTGTCAACAAAATCGGATTCGGTCTTGTTGTATACAGTTTAGCTGTTAAAGAATCTTCTAATGCTA LLIFKITNMNYLNFIAMSVPTDGTGFTFWLGAMAMMAASVFFFLSMNGVDAKWRTSLLVSGLITFIAAVHCMYMRDAHAAGDSTTVFRYVDWILTVPLMCVEFYLILKVAGATETDMWRLIGASTLMLVTGFFGESGWDNGALSPALWGALSGAAYFWIAYEVWLGGLKKLAVAAGGNVLAAHKTLCWFLLVGWAIYPVGYMAGTAGWYGDAGLLFGMDVSMEVIYNIGDAVNKIGFGLVVYSLAVKESSNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAATTTTTAAAATAACAAATATGAATTATTTAAACTTTATTGCAATGTCAGTCCCTACGGATGGCACTGGATTTACGTTCTGGCTTGGAGCGATGGCTATGATGGCAGCATCTGTGTTTTTCTTCTTGTCAATGAACGGTGTTGATGCTAAATGGAGAACTTCTCTTTTAGTTTCAGGATTAATTACATTTATTGCTGCTGTACACTGCATGTACATGAGAGATGCTCAT------------------------------------------------------GCAGCTGGAGATAGTACTACTGTATTTAGATATGTAGACTGG------------------------ATCTTAACAGTTCCATTAATGTGTGTTGAGTTTTACTTAATACTTAAGGTT---------GCT------GGAGCTACTGAA---ACTGAT------------------------------------ATGTGGAGA---CTTATTGGTGCTTCTACTTTAATGTTAGTTACTGGATTCTTTGGTGAG---------TCT------------------GGA------TGGGAC---------------------------------------AAT------------GGA---------GCT---------------------------TTATCTCCT------------------GCATTATGG---GGAGCACTTTCAGGTGCAGCTTACTTCTGGATTGCATACGAAGTA---------------TGG------TTA---GGTGGTCTTAAGAAACTAGCAGTTGCT------GCT---GGTGGAAAT---GTA---CTA---GCT---GCT---CAC---AAG---ACTTTA---TGTTGGTTCCTTCTTGTT---------------------------------------------------------------GGTTGG---------GCAATATATCCTGTAGGATATATGGCTGGAACAGCTGGA---TGGTAC---------GGT---GATGCAGGTCTTTTATTTGGTATGGATGTATCAATGGAAGTAATCTACAACATTGGTGATGCTGTCAACAAAATCGGATTCGGTCTTGTTGTATACAGTTTAGCTGTTAAAGAATCTTCTAATGCT--------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------LLIFKITNMNYLNFIAMSVPTDGTGFTFWLGAMAMMAASVFFFLSMNGVDAKWRTSLLVSGLITFIAAVHCMYMRDAH------------------AAGDSTTVFRYVDW--------ILTVPLMCVEFYLILKV---A--GATE-TD------------MWR-LIGASTLMLVTGFFGE---S------G--WD-------------N----G---A---------LSP------ALW-GALSGAAYFWIAYEV-----W--L-GGLKKLAVA--A-GGN-V-L-A-A-H-K-TL-CWFLLV---------------------GW---AIYPVGYMAGTAG-WY---G-DAGLLFGMDVSMEVIYNIGDAVNKIGFGLVVYSLAVKESSNA--------------------------------------- [II-CFB-b]_AY599905 [II-CFB-b] Uncultured_bacterium_clone_NA37_R15_4_partial_cds_AY599905 gi|47779418|gb|AY599905| Uncultured bacterium clone NA37 R15 4 proteorhodopsin gene, partial cds Uncultured bacterium clone NA37 R15 4 proteorhodopsin gene, partial cds AY599905 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 #na depth_of_0_m_at_a_station_in_the_North_Atlantic_[59.34N/21.3W]_on_21/6/98 Atlantic Ocean marine 59.34 -21.3 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na CGTCAACTATTAATTTTTAAAATAACAAATATGAATTATTTAAACTTTATTGCAATGTCAGTCCCTACGGATGGCACTGGATTTACGTTCTGGCTTGGAGCGATGGCTATGATGGCAGCATCTGTGTTTTTCTTCTTGTCAATGAACGGTGTTGATGCTAAATGGAGAACTTCTCTTTTAGTTTCAGGATTAATTACATTTATTGCAGCTGTACACTACATGTACATGAGAGATGCTCATGCAGCTGGAGATAGTACTACTGTATTTAGATATGTAGACTGGATCTTAACAGTTCCATTAATGTGTGTTGAGTTTTACTTAATACTTAAAGTTGCTGGAGCTACTAAAACTGATATGTGGAGACTTATTGGTGCTTCTACTTTAATGTTAGTTACTGGATTCTTTGGTGAGTCTGGATGGGACAATGGAGCTTTATCTCCTGCATTATGGGGAGCACTTTCAGGTGCAGCTTACTTCTGGATTGCATACGAAGTATGGTTAGGTGGTCTTAAGAAACTAGCAGTTGCTGTTGGTGGAAATGTACTAGCTGCTCACAAAACTTTATGTTGGTTCCTTCTTGTTGGTTGGGCAATATATCCTGTAGGATATATGGCTGGAACAGCTGGATGGTACGGTGATGCAGGTCTTTTATTTGGTATGGATGTATCAATGGAAGTAATCTACAACATTGGTGATGCTGTCAACAAAATCGGATTCGGTCTTGTTGTATACAGTTTAGCTGTTAAAGAATCTTCTAATGCT RQLLIFKITNMNYLNFIAMSVPTDGTGFTFWLGAMAMMAASVFFFLSMNGVDAKWRTSLLVSGLITFIAAVHYMYMRDAHAAGDSTTVFRYVDWILTVPLMCVEFYLILKVAGATKTDMWRLIGASTLMLVTGFFGESGWDNGALSPALWGALSGAAYFWIAYEVWLGGLKKLAVAVGGNVLAAHKTLCWFLLVGWAIYPVGYMAGTAGWYGDAGLLFGMDVSMEVIYNIGDAVNKIGFGLVVYSLAVKESSNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTCAACTATTAATTTTTAAAATAACAAATATGAATTATTTAAACTTTATTGCAATGTCAGTCCCTACGGATGGCACTGGATTTACGTTCTGGCTTGGAGCGATGGCTATGATGGCAGCATCTGTGTTTTTCTTCTTGTCAATGAACGGTGTTGATGCTAAATGGAGAACTTCTCTTTTAGTTTCAGGATTAATTACATTTATTGCAGCTGTACACTACATGTACATGAGAGATGCTCAT------------------------------------------------------GCAGCTGGAGATAGTACTACTGTATTTAGATATGTAGACTGG------------------------ATCTTAACAGTTCCATTAATGTGTGTTGAGTTTTACTTAATACTTAAAGTT---------GCT------GGAGCTACTAAA---ACTGAT------------------------------------ATGTGGAGA---CTTATTGGTGCTTCTACTTTAATGTTAGTTACTGGATTCTTTGGTGAG---------TCT------------------GGA------TGGGAC---------------------------------------AAT------------GGA---------GCT---------------------------TTATCTCCT------------------GCATTATGG---GGAGCACTTTCAGGTGCAGCTTACTTCTGGATTGCATACGAAGTA---------------TGG------TTA---GGTGGTCTTAAGAAACTAGCAGTTGCT------GTT---GGTGGAAAT---GTA---CTA---GCT---GCT---CAC---AAA---ACTTTA---TGTTGGTTCCTTCTTGTT---------------------------------------------------------------GGTTGG---------GCAATATATCCTGTAGGATATATGGCTGGAACAGCTGGA---TGGTAC---------GGT---GATGCAGGTCTTTTATTTGGTATGGATGTATCAATGGAAGTAATCTACAACATTGGTGATGCTGTCAACAAAATCGGATTCGGTCTTGTTGTATACAGTTTAGCTGTTAAAGAATCTTCTAATGCT--------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------RQLLIFKITNMNYLNFIAMSVPTDGTGFTFWLGAMAMMAASVFFFLSMNGVDAKWRTSLLVSGLITFIAAVHYMYMRDAH------------------AAGDSTTVFRYVDW--------ILTVPLMCVEFYLILKV---A--GATK-TD------------MWR-LIGASTLMLVTGFFGE---S------G--WD-------------N----G---A---------LSP------ALW-GALSGAAYFWIAYEV-----W--L-GGLKKLAVA--V-GGN-V-L-A-A-H-K-TL-CWFLLV---------------------GW---AIYPVGYMAGTAG-WY---G-DAGLLFGMDVSMEVIYNIGDAVNKIGFGLVVYSLAVKESSNA--------------------------------------- [II-CFB-b]_AY599904 [II-CFB-b] clone_NA13_R15_14_AY599904 gi|47834988|gb|AY599904| Uncultured bacterium clone NA13 R15 14 proteorhodopsin gene, partial cds. Uncultured bacterium clone NA13 R15 14 proteorhodopsin gene, partial cds. AY599904 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 11-juil-05 #na depth of 40 m at a station in the North Atlantic (59.30N,21.8W) on 14/6/98 Atlantic Ocean marine 59.3 -21.8 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na CTATTAATTTTTAAAATAACAAATATGAATTATTTAAACTTTATTGCAATGTCAGTCCCTACGGATGGCACTGGATTTACGTTCTGGCTTGGAGCGATGGCTATGATGGCAGCATCTGTGTTTTTCTTCTTGTCAATGAACGGTGTTGATGCTAAATGGAGAACTTCTCTTTTAGTTTCAGGATTAATTACATTTATTGCAGCTGTACACTACATGTACATGAGAGATGCTCATGCAGCTGGAGATAGTACTACTGTATTTAGATATGTAGACTGGATCTTAACAGTTCCATTAATGTGTGTTGAGTTTTACTTAATACTTAAGGTTGCTGGAGCTACTAAAACTGATATGTGGAGACTTATTGGTGCTTCTACTTTAATGTTAGTTACTGGATTCTTTGGTGAGTCTGGATGGGACAATGGAGCTTTATCTCCTGCATTATGGGGAGCACTTTCAGGTGCAGCTTACTTCTGGATTGCATACGAAGTATGGTTAGGTGGTCTTAAGAAATTAGCAGTTGCTGCTGGTGGAAACGTATTAGAAGCTCACAAAATGTTATGTTGGTTCCTTCTTGTTGGTTGGGCAATCTATCCATTAGGATATATGGCTGGTACTGACGGATGGTATTCTGGTATCTCTGCGATACTTCCAGATATGGAAGTAATCTACAACATCGGTGATGCTGTCAACAAAATCGGATTTGGTCTTGTTGTATACAGTTTAGCTGTTAAAGAATCTTCTAATGCTA LLIFKITNMNYLNFIAMSVPTDGTGFTFWLGAMAMMAASVFFFLSMNGVDAKWRTSLLVSGLITFIAAVHYMYMRDAHAAGDSTTVFRYVDWILTVPLMCVEFYLILKVAGATKTDMWRLIGASTLMLVTGFFGESGWDNGALSPALWGALSGAAYFWIAYEVWLGGLKKLAVAAGGNVLEAHKMLCWFLLVGWAIYPLGYMAGTDGWYSGISAILPDMEVIYNIGDAVNKIGFGLVVYSLAVKESSNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAATTTTTAAAATAACAAATATGAATTATTTAAACTTTATTGCAATGTCAGTCCCTACGGATGGCACTGGATTTACGTTCTGGCTTGGAGCGATGGCTATGATGGCAGCATCTGTGTTTTTCTTCTTGTCAATGAACGGTGTTGATGCTAAATGGAGAACTTCTCTTTTAGTTTCAGGATTAATTACATTTATTGCAGCTGTACACTACATGTACATGAGAGATGCTCAT------------------------------------------------------GCAGCTGGAGATAGTACTACTGTATTTAGATATGTAGACTGG------------------------ATCTTAACAGTTCCATTAATGTGTGTTGAGTTTTACTTAATACTTAAGGTT---------GCT------GGAGCTACTAAA---ACTGAT------------------------------------ATGTGGAGA---CTTATTGGTGCTTCTACTTTAATGTTAGTTACTGGATTCTTTGGTGAG---------TCT------------------GGA------TGGGAC---------------------------------------AAT------------GGA---------GCT---------------------------TTATCTCCT------------------GCATTATGG---GGAGCACTTTCAGGTGCAGCTTACTTCTGGATTGCATACGAAGTA---------------TGG------TTA---GGTGGTCTTAAGAAATTAGCAGTTGCT------GCT---GGTGGAAAC---GTA---TTA---GAA---GCT---CAC---AAA---ATGTTA---TGTTGGTTCCTTCTTGTT---------------------------------------------------------------GGTTGG---------GCAATCTATCCATTAGGATATATGGCTGGTACTGACGGA---TGGTAT---------TCT---GGTATCTCTGCGATACTTCCA---------GATATGGAAGTAATCTACAACATCGGTGATGCTGTCAACAAAATCGGATTTGGTCTTGTTGTATACAGTTTAGCTGTTAAAGAATCTTCTAATGCT--------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------LLIFKITNMNYLNFIAMSVPTDGTGFTFWLGAMAMMAASVFFFLSMNGVDAKWRTSLLVSGLITFIAAVHYMYMRDAH------------------AAGDSTTVFRYVDW--------ILTVPLMCVEFYLILKV---A--GATK-TD------------MWR-LIGASTLMLVTGFFGE---S------G--WD-------------N----G---A---------LSP------ALW-GALSGAAYFWIAYEV-----W--L-GGLKKLAVA--A-GGN-V-L-E-A-H-K-ML-CWFLLV---------------------GW---AIYPLGYMAGTDG-WY---S-GISAILP---DMEVIYNIGDAVNKIGFGLVVYSLAVKESSNA--------------------------------------- [II-CFB-b]_AY599899 [II-CFB-b] Uncultured_bacterium_clone_NA11_R15_3_partial_cds_AY599899 gi|47779410|gb|AY599899| Uncultured bacterium clone NA11 R15 3 proteorhodopsin gene, partial cds Uncultured bacterium clone NA11 R15 3 proteorhodopsin gene, partial cds AY599899 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 #na depth_of_0_m_at_a_station_in_the_North_Atlantic_[59.30N/21.8W]_on_14/6/98 Atlantic Ocean marine 59.3 -21.8 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na CCTCAACTATTAATTTTTAAAATAACAAATATGAATTATTTAAACTTTATTGCAATGTCTGTCCCTACGGATGGCACTGGATTTACGTTCTGGCTTGGAGCAATGGCTATGATGGCAGCATCTGTGTTTTTCTTCTTGTCAATGAACAGTGTTGATGCTAAATGGAGAACTTCTCTTTTAGTTTCAGGATTAATTACATTTATTGCTGCTGTACATTACATGTACATGAGAGATGCTCATGCAGCTGGAGATAGTACTACTGTATTTAGATACGTAGACTGGATCTTAACTGTTCCATTAATGTGTGTTGAGTTTTACTTAATACTTAAAGTTGCTGGAGCGACTAAATCTGATATGTGGAAGCTTATTGGAGCTTCAACTGTGATGCTTGTCACTGGATTCTTTGGAGAGTCTGGATGGGACGGTGGAATGTTAAGTGCTGGTGCTTGGGGATTCATCTCAGGTTTAGCATATTTCTGGATCGCATACGAAGTATGGTTAGGTGGTCTTAAAAAACTAGCAGTTGCTGCTGGTGGAAACGTATTAGAAGCTCACAAAATGTTATGTTGGTTCCTTCTTGTTGGTTGGGCAATTTATCCGTTAGGATATATGGCTGGTACTGATGGATGGTACAACGGTATTGAAGCGTTTTTACCTTCAATGGAAGTAATATACAACATTGGTGATGCTATCAACAAAATCGGATTTGGTCTTGTTGTATATGGTTTAGCTGTTAAAGAATCTTCTAATGCT PQLLIFKITNMNYLNFIAMSVPTDGTGFTFWLGAMAMMAASVFFFLSMNSVDAKWRTSLLVSGLITFIAAVHYMYMRDAHAAGDSTTVFRYVDWILTVPLMCVEFYLILKVAGATKSDMWKLIGASTVMLVTGFFGESGWDGGMLSAGAWGFISGLAYFWIAYEVWLGGLKKLAVAAGGNVLEAHKMLCWFLLVGWAIYPLGYMAGTDGWYNGIEAFLPSMEVIYNIGDAINKIGFGLVVYGLAVKESSNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTCAACTATTAATTTTTAAAATAACAAATATGAATTATTTAAACTTTATTGCAATGTCTGTCCCTACGGATGGCACTGGATTTACGTTCTGGCTTGGAGCAATGGCTATGATGGCAGCATCTGTGTTTTTCTTCTTGTCAATGAACAGTGTTGATGCTAAATGGAGAACTTCTCTTTTAGTTTCAGGATTAATTACATTTATTGCTGCTGTACATTACATGTACATGAGAGATGCTCAT------------------------------------------------------GCAGCTGGAGATAGTACTACTGTATTTAGATACGTAGACTGG------------------------ATCTTAACTGTTCCATTAATGTGTGTTGAGTTTTACTTAATACTTAAAGTT---------GCT------GGAGCGACTAAA---TCTGAT------------------------------------ATGTGGAAG---CTTATTGGAGCTTCAACTGTGATGCTTGTCACTGGATTCTTTGGAGAG---------TCT------------------GGA------TGGGAC---------------------------------------GGT------------GGA---------ATG---------------------------TTAAGTGCT------------------GGTGCTTGG---GGATTCATCTCAGGTTTAGCATATTTCTGGATCGCATACGAAGTA---------------TGG------TTA---GGTGGTCTTAAAAAACTAGCAGTTGCT------GCT---GGTGGAAAC---GTA---TTA---GAA---GCT---CAC---AAA---ATGTTA---TGTTGGTTCCTTCTTGTT---------------------------------------------------------------GGTTGG---------GCAATTTATCCGTTAGGATATATGGCTGGTACTGATGGA---TGGTAC---------AAC---GGTATTGAAGCGTTTTTACCT---------TCAATGGAAGTAATATACAACATTGGTGATGCTATCAACAAAATCGGATTTGGTCTTGTTGTATATGGTTTAGCTGTTAAAGAATCTTCTAATGCT--------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------PQLLIFKITNMNYLNFIAMSVPTDGTGFTFWLGAMAMMAASVFFFLSMNSVDAKWRTSLLVSGLITFIAAVHYMYMRDAH------------------AAGDSTTVFRYVDW--------ILTVPLMCVEFYLILKV---A--GATK-SD------------MWK-LIGASTVMLVTGFFGE---S------G--WD-------------G----G---M---------LSA------GAW-GFISGLAYFWIAYEV-----W--L-GGLKKLAVA--A-GGN-V-L-E-A-H-K-ML-CWFLLV---------------------GW---AIYPLGYMAGTDG-WY---N-GIEAFLP---SMEVIYNIGDAINKIGFGLVVYGLAVKESSNA--------------------------------------- [II-CFB-b]_AY599908 [II-CFB-b] Uncultured_bacterium_clone_NA39_R15_2_partial_cds_AY599908 gi|47779422|gb|AY599908| Uncultured bacterium clone NA39 R15 2 proteorhodopsin gene, partial cds Uncultured bacterium clone NA39 R15 2 proteorhodopsin gene, partial cds AY599908 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 #na depth_of_40_m_at_a_station_in_the_North_Atlantic_[59.34N/21.3W]_on_21/6/98 Atlantic Ocean marine 59.34 -21.3 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na CGTCAACTATTAATTTTTAAAATAACAAATATGAATTATTTAAACTTTATTGCAATGTCAGTCCCAACGGATGGCACTGGATTTACGTTCTGGCTTGGAGCGATGGCTATGATGGCAGCATCTGTGTTTTTCTTCTTGTCAATGAACGGTGTTGATGCTAAATGGAGAACTTCTCTTTTAGTTTCAGGATTAATTACATTTATTGCTGCTGTACATTACATGTACATGAGAGATGCTCATGCAGCTGGAGATAGTACTACTGTATTTAGATATGTAGACTGGATCTTAACGGTTCCGTTAATGTGTGTTGAGTTTTACTTAATACTTAAAGTTGCTGGAGCTACTAAAAAAGATATGTGGAGACTTATCGCTCTTTCAACTGTAATGCTAGTCGCTGGATTCTTTGGTGAGTCTGGATGGGATGGTGAAATGTTTGGAGCTCAAAATGCTGCTGTGTGGGGATTAATCTCAGGTGGAGCATACTTCTGGATCCTATACGATATTAGATGGGGTGGTCTTAAGAAAGTAGCAGAATCTGCTGGTGGAAATGTGTTATCAGCTCACAACATGTTAGTATGGTTTGTACTAGTTGGTTGGGCAATATATCCATTAGGATATATGGCTGGAACTGAAGGATGGTACAATAGTATACTACCTGCATTAGACATGGAAGTTATTTATAACGTTGGTGATGCTATTAACAAAATCGGATTTGGTCTTGTTGTATATAGCTTAGCTGTTAAAGAATCTTCTAATGCT RQLLIFKITNMNYLNFIAMSVPTDGTGFTFWLGAMAMMAASVFFFLSMNGVDAKWRTSLLVSGLITFIAAVHYMYMRDAHAAGDSTTVFRYVDWILTVPLMCVEFYLILKVAGATKKDMWRLIALSTVMLVAGFFGESGWDGEMFGAQNAAVWGLISGGAYFWILYDIRWGGLKKVAESAGGNVLSAHNMLVWFVLVGWAIYPLGYMAGTEGWYNSILPALDMEVIYNVGDAINKIGFGLVVYSLAVKESSNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTCAACTATTAATTTTTAAAATAACAAATATGAATTATTTAAACTTTATTGCAATGTCAGTCCCAACGGATGGCACTGGATTTACGTTCTGGCTTGGAGCGATGGCTATGATGGCAGCATCTGTGTTTTTCTTCTTGTCAATGAACGGTGTTGATGCTAAATGGAGAACTTCTCTTTTAGTTTCAGGATTAATTACATTTATTGCTGCTGTACATTACATGTACATGAGAGATGCTCAT------------------------------------------------------GCAGCTGGAGATAGTACTACTGTATTTAGATATGTAGACTGG------------------------ATCTTAACGGTTCCGTTAATGTGTGTTGAGTTTTACTTAATACTTAAAGTT---------GCT------GGAGCTACTAAA---AAAGAT------------------------------------ATGTGGAGA---CTTATCGCTCTTTCAACTGTAATGCTAGTCGCTGGATTCTTTGGTGAG---------TCT------------------GGA------TGGGAT---------------------------------------GGTGAAATG---TTTGGA---------GCT---------------------------CAAAATGCT------------------GCTGTGTGG---GGATTAATCTCAGGTGGAGCATACTTCTGGATCCTATACGATATT---------------AGA------TGG---GGTGGTCTTAAGAAAGTAGCAGAATCT------GCT---GGTGGAAAT---GTG---TTA---TCA---GCT---CAC---AAC---ATGTTA---GTATGGTTTGTACTAGTT---------------------------------------------------------------GGTTGG---------GCAATATATCCATTAGGATATATGGCTGGAACTGAAGGA---TGGTAC---------AAT---AGTATACTACCTGCATTA------------GACATGGAAGTTATTTATAACGTTGGTGATGCTATTAACAAAATCGGATTTGGTCTTGTTGTATATAGCTTAGCTGTTAAAGAATCTTCTAATGCT--------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------RQLLIFKITNMNYLNFIAMSVPTDGTGFTFWLGAMAMMAASVFFFLSMNGVDAKWRTSLLVSGLITFIAAVHYMYMRDAH------------------AAGDSTTVFRYVDW--------ILTVPLMCVEFYLILKV---A--GATK-KD------------MWR-LIALSTVMLVAGFFGE---S------G--WD-------------GEM-FG---A---------QNA------AVW-GLISGGAYFWILYDI-----R--W-GGLKKVAES--A-GGN-V-L-S-A-H-N-ML-VWFVLV---------------------GW---AIYPLGYMAGTEG-WY---N-SILPAL----DMEVIYNVGDAINKIGFGLVVYSLAVKESSNA--------------------------------------- [II-CFB-b]_AY599909 [II-CFB-b] Uncultured_bacterium_clone_NA39_R15_7_partial_cds_AY599909 gi|47779424|gb|AY599909| Uncultured bacterium clone NA39 R15 7 proteorhodopsin gene, partial cds Uncultured bacterium clone NA39 R15 7 proteorhodopsin gene, partial cds AY599909 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 #na depth_of_40_m_at_a_station_in_the_North_Atlantic_[59.34N/21.3W]_on_21/6/98 Atlantic Ocean marine 59.34 -21.3 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na CGTCAACTATTAATTTTTAAAATAACAAATATGAATTATTTAAACTTTATTGCAATGTCAGTCCCAACGGATGGCACTGGATTTACGTTCTGGCTTGGAGCGATGGCTATGATGGCAGCATCTGTGTTTTTCTTCTTGTCAATGAACGGTGTTGATGCTAAATGGAGAACTTCTCTTTTAGTTTCAGGATTAATTACATTTATTGCTGCTGTACATTACATGTACATGAGAGATGCTCATGCAGCTGGAGATAGTACTACTGTATTTAGATATGTAGACTGGATCTTAACGGTTCCGTTAATGTGTGTTGAGTTTTACTTAATACTTAAAGTTGCTGGAGCTACTAAAAAAGATATGTGGAGACTTATCGCTCTTTCAACTGTAATGCTAGTCGCTGGATTCTTTGGTGAGTCTGGATGGGATGGTGAAATGTTTGGAGCTCAAAATGCTGCTGTGTGGGGATTAATCTCAGGTGGAGCATACTTCTGGATCCTATACGATATTAGATGGGGTGGTCTTAAGAAAGTAGCAGAATCTGCTGGTGGAAATGTGTTATCAGCTCACAACATGTTAGTATGGTTTGTACTAGTTGGTTGGGCAATATATCCATTAGGATATATGGCTGGAACTGAAGGATGGTACAATAGTATACTACCTGCATTAGACATGGAAGTTATTTATAACGTTGGTGATGCTATTAACAAAATCGGATTTGGTCTTGTTGTATATAGCTTAGCTGTTAAAGAATCTTCTAATGCT RQLLIFKITNMNYLNFIAMSVPTDGTGFTFWLGAMAMMAASVFFFLSMNGVDAKWRTSLLVSGLITFIAAVHYMYMRDAHAAGDSTTVFRYVDWILTVPLMCVEFYLILKVAGATKKDMWRLIALSTVMLVAGFFGESGWDGEMFGAQNAAVWGLISGGAYFWILYDIRWGGLKKVAESAGGNVLSAHNMLVWFVLVGWAIYPLGYMAGTEGWYNSILPALDMEVIYNVGDAINKIGFGLVVYSLAVKESSNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTCAACTATTAATTTTTAAAATAACAAATATGAATTATTTAAACTTTATTGCAATGTCAGTCCCAACGGATGGCACTGGATTTACGTTCTGGCTTGGAGCGATGGCTATGATGGCAGCATCTGTGTTTTTCTTCTTGTCAATGAACGGTGTTGATGCTAAATGGAGAACTTCTCTTTTAGTTTCAGGATTAATTACATTTATTGCTGCTGTACATTACATGTACATGAGAGATGCTCAT------------------------------------------------------GCAGCTGGAGATAGTACTACTGTATTTAGATATGTAGACTGG------------------------ATCTTAACGGTTCCGTTAATGTGTGTTGAGTTTTACTTAATACTTAAAGTT---------GCT------GGAGCTACTAAA---AAAGAT------------------------------------ATGTGGAGA---CTTATCGCTCTTTCAACTGTAATGCTAGTCGCTGGATTCTTTGGTGAG---------TCT------------------GGA------TGGGAT---------------------------------------GGTGAAATG---TTTGGA---------GCT---------------------------CAAAATGCT------------------GCTGTGTGG---GGATTAATCTCAGGTGGAGCATACTTCTGGATCCTATACGATATT---------------AGA------TGG---GGTGGTCTTAAGAAAGTAGCAGAATCT------GCT---GGTGGAAAT---GTG---TTA---TCA---GCT---CAC---AAC---ATGTTA---GTATGGTTTGTACTAGTT---------------------------------------------------------------GGTTGG---------GCAATATATCCATTAGGATATATGGCTGGAACTGAAGGA---TGGTAC---------AAT---AGTATACTACCTGCATTA------------GACATGGAAGTTATTTATAACGTTGGTGATGCTATTAACAAAATCGGATTTGGTCTTGTTGTATATAGCTTAGCTGTTAAAGAATCTTCTAATGCT--------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------RQLLIFKITNMNYLNFIAMSVPTDGTGFTFWLGAMAMMAASVFFFLSMNGVDAKWRTSLLVSGLITFIAAVHYMYMRDAH------------------AAGDSTTVFRYVDW--------ILTVPLMCVEFYLILKV---A--GATK-KD------------MWR-LIALSTVMLVAGFFGE---S------G--WD-------------GEM-FG---A---------QNA------AVW-GLISGGAYFWILYDI-----R--W-GGLKKVAES--A-GGN-V-L-S-A-H-N-ML-VWFVLV---------------------GW---AIYPLGYMAGTEG-WY---N-SILPAL----DMEVIYNVGDAINKIGFGLVVYSLAVKESSNA--------------------------------------- [II-CFB-b]_AY599901 [II-CFB-b] Uncultured_bacterium_clone_NA13_R15_2_partial_cds_AY599901 gi|47779414|gb|AY599901| Uncultured bacterium clone NA13 R15 2 proteorhodopsin gene, partial cds Uncultured bacterium clone NA13 R15 2 proteorhodopsin gene, partial cds AY599901 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 #na depth_of_40_m_at_a_station_in_the_North_Atlantic_[59.30N/21.8W]_on_14/6/98 Atlantic Ocean marine 59.3 -21.8 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na CGTCAACTATTAATTTTTAAAATAACAAATATGAATTATTTAAACTTTATTGCAATGTCAGTCCCAACGGATGGCACTGGATTTACGTTCTGGCTTGGAGCGATGGCTATGATGGCAGCATCTGTGTTTTTCTTCTTGTCAATGAACGGTGTTGATGCTAAATGGAGAACTTCTCTTTTAGTTTCAGGATTAATTACATTTATTGCTGCTGTACATTACATGTACATGAGAGATGCTCATGCAGCTGGAGATAGTACTACTGTATTTAGATATGTAGACTGGATCTTAACAGTTCCGTTAATGTGTGTTGAGTTTTACTTAATACTTAAAGTTGCTGGAGCTACTAAAAAAGATATGTGGAGACTTATCGCTCTTTCAACTGTAATGCTAGTCGCTGGATTCTTTGGTGAGTCTGGATGGGATGGTGAAATGTTTGGAGCTCAAAATGCTGCTGTGTGGGGATTAATCTCAGGTGGAGCATACTTCTGGATCTTATACGATATTAGATGGGGTGGTCTTAAGAAAGTAGCAGAATCTGCTGGTGGAAATGTGTTATCAGCTCACAACATGTTAGTATGGTTTGTACTAGTTGGTTGGGCAATATATCCATTAGGATATATGGCTGGAACTGAAGGATGGTACAATAGTATACTACCTGCATTAGACATGGAAGTTATTTATAACGTTGGTGATGCTATCAACAAAATCGGATTCGGTCTTGTTGTATATAGTTTAGCTGTTAAAGAATCTTCTAATGCT RQLLIFKITNMNYLNFIAMSVPTDGTGFTFWLGAMAMMAASVFFFLSMNGVDAKWRTSLLVSGLITFIAAVHYMYMRDAHAAGDSTTVFRYVDWILTVPLMCVEFYLILKVAGATKKDMWRLIALSTVMLVAGFFGESGWDGEMFGAQNAAVWGLISGGAYFWILYDIRWGGLKKVAESAGGNVLSAHNMLVWFVLVGWAIYPLGYMAGTEGWYNSILPALDMEVIYNVGDAINKIGFGLVVYSLAVKESSNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTCAACTATTAATTTTTAAAATAACAAATATGAATTATTTAAACTTTATTGCAATGTCAGTCCCAACGGATGGCACTGGATTTACGTTCTGGCTTGGAGCGATGGCTATGATGGCAGCATCTGTGTTTTTCTTCTTGTCAATGAACGGTGTTGATGCTAAATGGAGAACTTCTCTTTTAGTTTCAGGATTAATTACATTTATTGCTGCTGTACATTACATGTACATGAGAGATGCTCAT------------------------------------------------------GCAGCTGGAGATAGTACTACTGTATTTAGATATGTAGACTGG------------------------ATCTTAACAGTTCCGTTAATGTGTGTTGAGTTTTACTTAATACTTAAAGTT---------GCT------GGAGCTACTAAA---AAAGAT------------------------------------ATGTGGAGA---CTTATCGCTCTTTCAACTGTAATGCTAGTCGCTGGATTCTTTGGTGAG---------TCT------------------GGA------TGGGAT---------------------------------------GGTGAAATG---TTTGGA---------GCT---------------------------CAAAATGCT------------------GCTGTGTGG---GGATTAATCTCAGGTGGAGCATACTTCTGGATCTTATACGATATT---------------AGA------TGG---GGTGGTCTTAAGAAAGTAGCAGAATCT------GCT---GGTGGAAAT---GTG---TTA---TCA---GCT---CAC---AAC---ATGTTA---GTATGGTTTGTACTAGTT---------------------------------------------------------------GGTTGG---------GCAATATATCCATTAGGATATATGGCTGGAACTGAAGGA---TGGTAC---------AAT---AGTATACTACCTGCATTA------------GACATGGAAGTTATTTATAACGTTGGTGATGCTATCAACAAAATCGGATTCGGTCTTGTTGTATATAGTTTAGCTGTTAAAGAATCTTCTAATGCT--------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------RQLLIFKITNMNYLNFIAMSVPTDGTGFTFWLGAMAMMAASVFFFLSMNGVDAKWRTSLLVSGLITFIAAVHYMYMRDAH------------------AAGDSTTVFRYVDW--------ILTVPLMCVEFYLILKV---A--GATK-KD------------MWR-LIALSTVMLVAGFFGE---S------G--WD-------------GEM-FG---A---------QNA------AVW-GLISGGAYFWILYDI-----R--W-GGLKKVAES--A-GGN-V-L-S-A-H-N-ML-VWFVLV---------------------GW---AIYPLGYMAGTEG-WY---N-SILPAL----DMEVIYNVGDAINKIGFGLVVYSLAVKESSNA--------------------------------------- [II-CFB-b]_EU683603 [II-CFB-b] W8703_env_samples_EU683603 gi|187711679|gb|EU683603| Uncultured bacterium clone W8703 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W8703 putative proteorhodopsin gene, partial cds EU683603 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_70m_depth China Sea marine 30.5 125.52 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCAGCGTTTTTCTTCTTATCAATGAACTCTTTTGATTCTAAATGGAGAACATCTATTTTAGTTTCTGGGCTAATTACTTTTATTGCCGCTGTTCACTATTGGTATATGAGAGATTATTGGGCTGAAAATGCCACTTCTCCTACATTTTTTAGATATGTAGATTGGATTCTAACAGTACCTTTAATGTGTGTTGAATTTTATTTAATACTTAAAGCTGCTGGAGCTACTAAAGCTTTAATGTGGAAACTAATTCTTCTTTCAACTGTAATGTTAGTTACTGGATATTTTGGTGAA AMMAASAFFFLSMNSFDSKWRTSILVSGLITFIAAVHYWYMRDYWAENATSPTFFRYVDWILTVPLMCVEFYLILKAAGATKALMWKLILLSTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCAGCGTTTTTCTTCTTATCAATGAACTCTTTTGATTCTAAATGGAGAACATCTATTTTAGTTTCTGGGCTAATTACTTTTATTGCCGCTGTTCACTATTGGTATATGAGAGATTATTGGGCT---------------------------------------------------GAAAATGCCACTTCTCCTACATTTTTTAGATATGTAGATTGG------------------------ATTCTAACAGTACCTTTAATGTGTGTTGAATTTTATTTAATACTTAAAGCT---------GCT------GGAGCTACTAAA---GCTTTA------------------------------------ATGTGGAAA---CTAATTCTTCTTTCAACTGTAATGTTAGTTACTGGATATTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDSKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------ENATSPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GATK-AL------------MWK-LILLSTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_DQ927037 [II-CFB-b] clone_AT06037_DQ927037 gi|116294189|gb|DQ927037| Uncultured bacterium clone AT06037 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT06037 putative proteorhodopsin gene, partial cds. DQ927037 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGGTAGCCGCTACGGTTTTCTTCTTTTTATCGTTGGATGCTGGTGGTGCTAAATGGAGAACATCAATCCTCGTGTCAGGGCTTATCACATTTATAGCTGCAGTACACTATTACTACATGAGAGACGCATCTGTTTCAGGTGATTCAGTAACTTTCTTCAGATATGTAGACTGGATTTTAACAGTTCCACTAATGTGCGTTGAATTTTACTTAATTCTTCAAAAAGCTGGAGCCAAAAAGAGTCTTATGTGGAATTTAATAGGATTATCAACTTTCATGCTTGTAACTGGATATATCGGTGAAGCTGGATTAGGAGACGCTGTTGTTTGGGGTACTGCTTCTGGTATATCTTACTTCTTTATAGTTTATATATTATGGTTTGGTAGTGCTGGACAACTTGCTCAAAAGGCAGGTGGAGCGGTTCTAGACGCTTTTAATGCTCTTAAGTGGTTTGTACTTGTCGGATGGGCCATCTACCCA MVAATVFFFLSLDAGGAKWRTSILVSGLITFIAAVHYYYMRDASVSGDSVTFFRYVDWILTVPLMCVEFYLILQKAGAKKSLMWNLIGLSTFMLVTGYIGEAGLGDAVVWGTASGISYFFIVYILWFGSAGQLAQKAGGAVLDAFNALKWFVLVGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACGGTTTTCTTCTTTTTATCGTTGGATGCTGGTGGTGCTAAATGGAGAACATCAATCCTCGTGTCAGGGCTTATCACATTTATAGCTGCAGTACACTATTACTACATGAGAGACGCATCT------------------------------------------------------GTTTCAGGTGATTCAGTAACTTTCTTCAGATATGTAGACTGG------------------------ATTTTAACAGTTCCACTAATGTGCGTTGAATTTTACTTAATTCTTCAAAAA---------GCT------GGAGCCAAAAAG---AGTCTT------------------------------------ATGTGGAAT---TTAATAGGATTATCAACTTTCATGCTTGTAACTGGATATATCGGTGAA---------GCT------------------GGA------TTAGGA---------------------------------------------------------------------------------------------------GACGCT------------------GTTGTTTGG---GGTACTGCTTCTGGTATATCTTACTTCTTTATAGTTTATATATTA---------------TGG------TTT---GGTAGTGCTGGACAACTTGCTCAAAAG------GCA---GGTGGAGCG---GTT---CTA---GAC---GCT---TTT---AAT---GCTCTT---AAGTGGTTTGTACTTGTC---------------------------------------------------------------GGATGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLSLDAGGAKWRTSILVSGLITFIAAVHYYYMRDAS------------------VSGDSVTFFRYVDW--------ILTVPLMCVEFYLILQK---A--GAKK-SL------------MWN-LIGLSTFMLVTGYIGE---A------G--LG---------------------------------DA------VVW-GTASGISYFFIVYIL-----W--F-GSAGQLAQK--A-GGA-V-L-D-A-F-N-AL-KWFVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-CFB-b]_EU915908 [II-CFB-b] US120213_env_samples_EU915908 gi|229358698|gb|EU915908| Uncultured organism clone US120213 putative proteorhodopsin gene, partial cds Uncultured organism clone US120213 putative proteorhodopsin gene, partial cds EU915908 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 31-DEC-2009 #na ocean_surface_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACCGCATTCTTCTTTTTATCTTTGGATGCTGGTGGTGCGAAATGGAGAACATCAATCCTTGTGTCAGGGCTTATCACATTTATAGCTGCAGTACACTATTACTACATGAGAGACGCATCTGTTTCAGGAGACTCAGTAACTTTCTTTAGATATGTAGACTGGATTTTAACAGTTCCACTAATGTGCGTTGAATTTTATTTAATTCTTCAAAAAGCTGGAGCTAAAAAGAGTCTTATGTGGAATTTAATATTTTTATCTACTGCAATGCTAGTAACCGGATATATAGGTGAAGCTGGACTAGGTGATGCTGAATTATGGGGAACCATTTCTGGATTCACTTACTTTGGGATCGTATACATCTTATGGTTCGGTAGTGCTGGACAACTTGCTCAAAAGGCAGGTGGAGCTGTTTTAGACGCTTTCAATGCTCTTAAGTGGTTTGTACTTGTTGGTTGGGCCATCTAC MVAATAFFFLSLDAGGAKWRTSILVSGLITFIAAVHYYYMRDASVSGDSVTFFRYVDWILTVPLMCVEFYLILQKAGAKKSLMWNLIFLSTAMLVTGYIGEAGLGDAELWGTISGFTYFGIVYILWFGSAGQLAQKAGGAVLDAFNALKWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACCGCATTCTTCTTTTTATCTTTGGATGCTGGTGGTGCGAAATGGAGAACATCAATCCTTGTGTCAGGGCTTATCACATTTATAGCTGCAGTACACTATTACTACATGAGAGACGCATCT------------------------------------------------------GTTTCAGGAGACTCAGTAACTTTCTTTAGATATGTAGACTGG------------------------ATTTTAACAGTTCCACTAATGTGCGTTGAATTTTATTTAATTCTTCAAAAA---------GCT------GGAGCTAAAAAG---AGTCTT------------------------------------ATGTGGAAT---TTAATATTTTTATCTACTGCAATGCTAGTAACCGGATATATAGGTGAA---------GCT------------------GGA------CTAGGT---------------------------------------------------------------------------------------------------GATGCT------------------GAATTATGG---GGAACCATTTCTGGATTCACTTACTTTGGGATCGTATACATCTTA---------------TGG------TTC---GGTAGTGCTGGACAACTTGCTCAAAAG------GCA---GGTGGAGCT---GTT---TTA---GAC---GCT---TTC---AAT---GCTCTT---AAGTGGTTTGTACTTGTT---------------------------------------------------------------GGTTGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLSLDAGGAKWRTSILVSGLITFIAAVHYYYMRDAS------------------VSGDSVTFFRYVDW--------ILTVPLMCVEFYLILQK---A--GAKK-SL------------MWN-LIFLSTAMLVTGYIGE---A------G--LG---------------------------------DA------ELW-GTISGFTYFGIVYIL-----W--F-GSAGQLAQK--A-GGA-V-L-D-A-F-N-AL-KWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-ARCTIC22G04]_JX863195 [II-CFB-ARCTIC22G04] MALINA_OTU30_325_M_env_samples_JX863195 gi|425477340|gb|JX863195| Uncultured bacterium clone MALINA OTU30 325 M putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU30 325 M putative proteorhodopsin gene, partial cds JX863195 [[proteorhodopsin super-cluster II/CFB-like cluster/ARCTIC22G04-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster ARCTIC22G04-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 11-juil-09 0m_depth Arctic Ocean marine 67.49 -168.12 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGATTTTAACTGTGCCATTAATGTGTGTTGAATTTTATTTAATACTAAAGGTAGCAGGAGCAAAAAAATCAATGATGTGGAGACTAATCTTCTTATCAACTATTATGTTAGTAACAGGATATTTTGGAGAAGCAGTATATACTGATAGTGCAGCTATGTGGGGATTCATCTCTGGAGCAGCATACTTTGTTATTGTTTACGATATTTGGTTAGGATCTGCAAAGAAATTAGCTGTAGAAGCTGGTGGTGCAGTCTTAAAAGCACACAAAACTTTGTGTTGGTTTGTTTTAGTA WILTVPLMCVEFYLILKVAGAKKSMMWRLIFLSTIMLVTGYFGEAVYTDSAAMWGFISGAAYFVIVYDIWLGSAKKLAVEAGGAVLKAHKTLCWFVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------ATTTTAACTGTGCCATTAATGTGTGTTGAATTTTATTTAATACTAAAGGTA---------GCA------GGAGCAAAAAAA---TCAATG------------------------------------ATGTGGAGA---CTAATCTTCTTATCAACTATTATGTTAGTAACAGGATATTTTGGAGAA---------GCA------------------GTA------TATACT------------------------------------------------------------------------------------------------GATAGTGCA------------------GCTATGTGG---GGATTCATCTCTGGAGCAGCATACTTTGTTATTGTTTACGATATT---------------TGG------TTA---GGATCTGCAAAGAAATTAGCTGTAGAA------GCT---GGTGGTGCA---GTC---TTA---AAA---GCA---CAC---AAA---ACTTTG---TGTTGGTTTGTTTTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------ILTVPLMCVEFYLILKV---A--GAKK-SM------------MWR-LIFLSTIMLVTGYFGE---A------V--YT--------------------------------DSA------AMW-GFISGAAYFVIVYDI-----W--L-GSAKKLAVE--A-GGA-V-L-K-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-ARCTIC22G04]_EU795231 [II-CFB-ARCTIC22G04] ARCTIC02_G_4_genomic_EU795231 gi|193084445|gb|EU795231| Uncultured bacterium ARCTIC02 G 04 genomic sequence Uncultured bacterium ARCTIC02 G 04 genomic sequence EU795231 [[proteorhodopsin super-cluster II/CFB-like cluster/ARCTIC22G04-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster ARCTIC22G04-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:542383 genomic_DNA other 02-juil-08 #na Arctic Arctic Ocean marine 71.4 -156.7 Direct Submission Henn,M.R., Young,S., Jaffe,D.B., Gnerre,S., Berlin,A., Heiman,D., Hepburn,T., Sykes,S., Kirchman,D.L., Cottrell,M.T., Lander,E., Nusbaum,C. and Birren,B. Submitted (21MAY2008) Broad Institute of MIT and Harvard, 320 Charles Street, Cambridge, MA 02141, USA #na #na ATGAATTTATCATTAAATTTTTTATCAGTTGCTAAAATGGCAGCAGACGATTATGTTGGATTTACATTTTTTGTAGGATGTATGGCTATGATGGCTGCATCAGTATTTTTCTTTTTATCAATGAATAGTGTTGATAAGAAATGGAGAACATCTCTTCTTGTATCTGGTTTAATTACTTTTATTGCAGCAGTGCACTACTTTTACATGAGAGACTATTGGGCTTCAACAGGTGACTCACCAACTTTCTTCCGTTATGTAGATTGGATTTTAACTGTGCCATTAATGTGTGTTGAGTTTTACTTGATATTAAAAGTTGCAGGCGCAAAAAAATCTATGATGTGGAGATTGATCTTCTTATCAACTATTATGCTAGTAACAGGATATTTTGGAGAAGCAGTATATACTGATAGTGCAGCTATGTGGGGATTCATCTCTGGAGCAGCATACTTTGTTATTGTTTACGATATTTGGTTAGGATCTGCAAAGAAATTAGCTGTTGCAGCTGGTGGTGCAGTATTAAAAGCACACAAAACTTTATGTTGGTTTGTTCTAGTAGGTTGGGCAATTTATCCTTTAGGATATATGGCTGGAACTGAAGGATGGTACACTCAATTTCTAGGTAGTTTTAACGTAGATGTTATATACAACATCGCTGATGCTATTAACAAAATAGGATTTGGTTTAGTTGTTTACACTTTAGCAGTAAATAGCTCAAACGAT MNLSLNFLSVAKMAADDYVGFTFFVGCMAMMAASVFFFLSMNSVDKKWRTSLLVSGLITFIAAVHYFYMRDYWASTGDSPTFFRYVDWILTVPLMCVEFYLILKVAGAKKSMMWRLIFLSTIMLVTGYFGEAVYTDSAAMWGFISGAAYFVIVYDIWLGSAKKLAVAAGGAVLKAHKTLCWFVLVGWAIYPLGYMAGTEGWYTQFLGSFNVDVIYNIADAINKIGFGLVVYTLAVNSSND ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAATTTATCATTAAATTTTTTATCAGTTGCTAAAATGGCAGCAGACGATTATGTTGGATTTACATTTTTTGTAGGATGTATGGCTATGATGGCTGCATCAGTATTTTTCTTTTTATCAATGAATAGTGTTGATAAGAAATGGAGAACATCTCTTCTTGTATCTGGTTTAATTACTTTTATTGCAGCAGTGCACTACTTTTACATGAGAGACTATTGGGCT---------------------------------------------------TCAACAGGTGACTCACCAACTTTCTTCCGTTATGTAGATTGG------------------------ATTTTAACTGTGCCATTAATGTGTGTTGAGTTTTACTTGATATTAAAAGTT---------GCA------GGCGCAAAAAAA---TCTATG------------------------------------ATGTGGAGA---TTGATCTTCTTATCAACTATTATGCTAGTAACAGGATATTTTGGAGAA---------GCA------------------GTA------TATACT------------------------------------------------------------------------------------------------GATAGTGCA------------------GCTATGTGG---GGATTCATCTCTGGAGCAGCATACTTTGTTATTGTTTACGATATT---------------TGG------TTA---GGATCTGCAAAGAAATTAGCTGTTGCA------GCT---GGTGGTGCA---GTA---TTA---AAA---GCA---CAC---AAA---ACTTTA---TGTTGGTTTGTTCTAGTA---------------------------------------------------------------GGTTGG---------GCAATTTATCCTTTAGGATATATGGCTGGAACTGAAGGA---TGGTAC---------ACT---CAATTTCTAGGTAGTTTTAAC---------------------GTAGATGTTATATACAACATCGCTGATGCTATTAACAAAATAGGATTTGGTTTAGTTGTTTACACTTTAGCAGTAAATAGCTCAAACGAT--------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------MNLSLNFLSVAKMAADDYVGFTFFVGCMAMMAASVFFFLSMNSVDKKWRTSLLVSGLITFIAAVHYFYMRDYWA-----------------STGDSPTFFRYVDW--------ILTVPLMCVEFYLILKV---A--GAKK-SM------------MWR-LIFLSTIMLVTGYFGE---A------V--YT--------------------------------DSA------AMW-GFISGAAYFVIVYDI-----W--L-GSAKKLAVA--A-GGA-V-L-K-A-H-K-TL-CWFVLV---------------------GW---AIYPLGYMAGTEG-WY---T-QFLGSFN-------VDVIYNIADAINKIGFGLVVYTLAVNSSND------------------------------------- [II-CFB-Cyclobacteriaceae]_GU338810 [II-CFB-Cyclobacteriaceae] GHC6B11_env_samples_GU338810 gi|283574493|gb|GU338810| Uncultured Antarctic sea ice bacterium clone GHc6B11 putative proteorhodopsin gene, partial cds Uncultured Antarctic sea ice bacterium clone GHc6B11 putative proteorhodopsin gene, partial cds GU338810 [[proteorhodopsin super-cluster II/CFB-like cluster/Cyclobacteriaceae-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Cyclobacteriaceae-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:219048 genomic_DNA other 27Aug-2010 #na bottom_sea_ice Antarctic Ocean marine -77.016667 162.866667 Proteorhodopsinbearing bacteria in Antarctic sea ice Koh,E.Y., AtamnaIsmaeel,N., Martin,A., Cowie,R.O., Beja,O., Davy,S.K., Maas,E.W. and Ryan,K.G. Appl. Environ. Microbiol. 76 (17), 59185925 (2010) 20601510 #na GCGCAATTCATGCGGTACATCGATTGGATCCTGACCGTTCCATTGATGTGTGTTGAATTCTACCTGATTCTACGTGCCGTTGGTGCCAAACAAATTCTGCTATGGAAGATGATCGGTTACTCTTTGATCATGCTTATCTTCGGTTACTTAGGTGAGACCGTTTTCCGCAGCCAGTCCGTTCTCTTTGGCGTACTCTCTACTGTAGGCTATGTCGGTATTGTCTACGAAGCATGGTTTGGTTCCGCCAAGAAATTGGCCGTCAATTCTAACGACCCGAAGCTACTTGGTGCCATCAAAGCTCTTGGTTGGTTCGTTCTCGCAGGCTGGGCCATATATCCAAGCTTGCGC AQFMRYIDWILTVPLMCVEFYLILRAVGAKQILLWKMIGYSLIMLIFGYLGETVFRSQSVLFGVLSTVGYVGIVYEAWFGSAKKLAVNSNDPKLLGAIKALGWFVLAGWAIYPSLR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCAATTCATGCGGTACATCGATTGG------------------------ATCCTGACCGTTCCATTGATGTGTGTTGAATTCTACCTGATTCTACGTGCC---------GTT------GGTGCCAAACAA---ATTCTG------------------------------------CTATGGAAG---ATGATCGGTTACTCTTTGATCATGCTTATCTTCGGTTACTTAGGTGAG---------ACC------------------GTT------TTCCGC------------------------------------------------------------------------------------------------AGCCAGTCC------------------GTTCTCTTT---GGCGTACTCTCTACTGTAGGCTATGTCGGTATTGTCTACGAAGCA---------------TGG------TTT---GGTTCCGCCAAGAAATTGGCCGTCAAT------TCT---AACGACCCGAAGCTA---CTT---GGT---GCC---ATC---AAA---GCTCTT---GGTTGGTTCGTTCTCGCA---------------------------------------------------------------GGCTGG---------GCCATATATCCAAGCTTGCGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AQFMRYIDW--------ILTVPLMCVEFYLILRA---V--GAKQ-IL------------LWK-MIGYSLIMLIFGYLGE---T------V--FR--------------------------------SQS------VLF-GVLSTVGYVGIVYEA-----W--F-GSAKKLAVN--S-NDPKL-L-G-A-I-K-AL-GWFVLA---------------------GW---AIYPSLR----------------------------------------------------------------------------------------------- [II-CFB-Cyclobacteriaceae]_GU338832 [II-CFB-Cyclobacteriaceae] GHC6B11_env_samples_GU338832 gi|283574535|gb|GU338832| Uncultured Antarctic sea ice bacterium clone GHC6B11 putative proteorhodopsin gene, partial cds Uncultured Antarctic sea ice bacterium clone GHC6B11 putative proteorhodopsin gene, partial cds GU338832 [[proteorhodopsin super-cluster II/CFB-like cluster/Cyclobacteriaceae-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Cyclobacteriaceae-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:219048 genomic_DNA other 27Aug-2010 #na bottom_sea_ice Antarctic Ocean marine -77.016667 162.866667 Proteorhodopsinbearing bacteria in Antarctic sea ice Koh,E.Y., AtamnaIsmaeel,N., Martin,A., Cowie,R.O., Beja,O., Davy,S.K., Maas,E.W. and Ryan,K.G. Appl. Environ. Microbiol. 76 (17), 59185925 (2010) 20601510 #na GCGCAATTCATGCGGTACATCGATTGGATCCTGACCGTTCCATTGATGTGTGTTGAATTCTACCTGATTCTACGTGCCGTTGGTGCCAAACAAATTCTGCTATGGAAGATGATCGGTTACTCTTTGATCATGCTTATCTTCGGTTACTTAGGTGAGACCGTTTTCCGCAGCCAGTCCGTTCTCTTTGGCGTACTCTCTACTGTAGGCTATGTCGGTATTGTCTACGAAGCATGGTTTGGTTCCGCCAAGAAATTGGCCGTCAATTCTAACGACCCGAAGCTACTTGGTGCCATCAAAGCTCTTGGTTGGTTCGTTCTCGCAGGCTGGGCCATATATCCAAGCTTGCGC AQFMRYIDWILTVPLMCVEFYLILRAVGAKQILLWKMIGYSLIMLIFGYLGETVFRSQSVLFGVLSTVGYVGIVYEAWFGSAKKLAVNSNDPKLLGAIKALGWFVLAGWAIYPSLR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCAATTCATGCGGTACATCGATTGG------------------------ATCCTGACCGTTCCATTGATGTGTGTTGAATTCTACCTGATTCTACGTGCC---------GTT------GGTGCCAAACAA---ATTCTG------------------------------------CTATGGAAG---ATGATCGGTTACTCTTTGATCATGCTTATCTTCGGTTACTTAGGTGAG---------ACC------------------GTT------TTCCGC------------------------------------------------------------------------------------------------AGCCAGTCC------------------GTTCTCTTT---GGCGTACTCTCTACTGTAGGCTATGTCGGTATTGTCTACGAAGCA---------------TGG------TTT---GGTTCCGCCAAGAAATTGGCCGTCAAT------TCT---AACGACCCGAAGCTA---CTT---GGT---GCC---ATC---AAA---GCTCTT---GGTTGGTTCGTTCTCGCA---------------------------------------------------------------GGCTGG---------GCCATATATCCAAGCTTGCGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AQFMRYIDW--------ILTVPLMCVEFYLILRA---V--GAKQ-IL------------LWK-MIGYSLIMLIFGYLGE---T------V--FR--------------------------------SQS------VLF-GVLSTVGYVGIVYEA-----W--F-GSAKKLAVN--S-NDPKL-L-G-A-I-K-AL-GWFVLA---------------------GW---AIYPSLR----------------------------------------------------------------------------------------------- [II-CFB-Cyclobacteriaceae]_GU338814 [II-CFB-Cyclobacteriaceae] GHC1B37_env_samples_GU338814 gi|283574500|gb|GU338814| Uncultured Antarctic sea ice bacterium clone GHC1B37 putative proteorhodopsin gene, partial cds Uncultured Antarctic sea ice bacterium clone GHC1B37 putative proteorhodopsin gene, partial cds GU338814 [[proteorhodopsin super-cluster II/CFB-like cluster/Cyclobacteriaceae-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Cyclobacteriaceae-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:219048 genomic_DNA other 27Aug-2010 #na bottom_sea_ice Antarctic Ocean marine -77.016667 162.866667 Proteorhodopsinbearing bacteria in Antarctic sea ice Koh,E.Y., AtamnaIsmaeel,N., Martin,A., Cowie,R.O., Beja,O., Davy,S.K., Maas,E.W. and Ryan,K.G. Appl. Environ. Microbiol. 76 (17), 59185925 (2010) 20601510 #na TGCGCGCAATTCATGCGGTATATAGATTGGATCCTGACCGTTCCATTGATGTGTGTTGAATTCTACCTGATTCTACGTGCCGTTGGTGCCAAACAAATTCTGCTATGGAAGATGATCGGTTACTCTTTGATCATGCTTATCTTCGGTTACTTAGGTGAGACCGTTTTCCGCAGCCAGTCCGTTCTCTTTGGCGTACTCTCTACTGTAGGCTATGTCGGTATTGTCTACGAAGCATGGTTTGGTTCCGCCAAGAAATTGGCCGTCAATTCTAACGACCCGAAGCTACTTGGTGCCATCAAAGCTCTTGGTTGGTTCGTTCTCGCAGGCTGGGCTATCTACCCAAGCTTGCGC CAQFMRYIDWILTVPLMCVEFYLILRAVGAKQILLWKMIGYSLIMLIFGYLGETVFRSQSVLFGVLSTVGYVGIVYEAWFGSAKKLAVNSNDPKLLGAIKALGWFVLAGWAIYPSLR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCGCGCAATTCATGCGGTATATAGATTGG------------------------ATCCTGACCGTTCCATTGATGTGTGTTGAATTCTACCTGATTCTACGTGCC---------GTT------GGTGCCAAACAA---ATTCTG------------------------------------CTATGGAAG---ATGATCGGTTACTCTTTGATCATGCTTATCTTCGGTTACTTAGGTGAG---------ACC------------------GTT------TTCCGC------------------------------------------------------------------------------------------------AGCCAGTCC------------------GTTCTCTTT---GGCGTACTCTCTACTGTAGGCTATGTCGGTATTGTCTACGAAGCA---------------TGG------TTT---GGTTCCGCCAAGAAATTGGCCGTCAAT------TCT---AACGACCCGAAGCTA---CTT---GGT---GCC---ATC---AAA---GCTCTT---GGTTGGTTCGTTCTCGCA---------------------------------------------------------------GGCTGG---------GCTATCTACCCAAGCTTGCGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAQFMRYIDW--------ILTVPLMCVEFYLILRA---V--GAKQ-IL------------LWK-MIGYSLIMLIFGYLGE---T------V--FR--------------------------------SQS------VLF-GVLSTVGYVGIVYEA-----W--F-GSAKKLAVN--S-NDPKL-L-G-A-I-K-AL-GWFVLA---------------------GW---AIYPSLR----------------------------------------------------------------------------------------------- [II-CFB-Cyclobacteriaceae]_GU338824 [II-CFB-Cyclobacteriaceae] GHC6B8_env_samples_GU338824 gi|283574520|gb|GU338824| Uncultured Antarctic sea ice bacterium clone GHC6B8 putative proteorhodopsin gene, partial cds Uncultured Antarctic sea ice bacterium clone GHC6B8 putative proteorhodopsin gene, partial cds GU338824 [[proteorhodopsin super-cluster II/CFB-like cluster/Cyclobacteriaceae-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Cyclobacteriaceae-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:219048 genomic_DNA other 27Aug-2010 #na bottom_sea_ice Antarctic Ocean marine -77.016667 162.866667 Proteorhodopsinbearing bacteria in Antarctic sea ice Koh,E.Y., AtamnaIsmaeel,N., Martin,A., Cowie,R.O., Beja,O., Davy,S.K., Maas,E.W. and Ryan,K.G. Appl. Environ. Microbiol. 76 (17), 59185925 (2010) 20601510 #na TGCGCGCAATTCCATAGGTACATAGATTGGATCCTGACCGTTCCATTGATGTGTGTTGAATTCTACCTGATTCTACGTGCCGTTGGTGCCAAACAAATTCTGCTATGGAAGATGATCGGTTACTCTTTGATCATGCTTATCTTCGGTTACTTAGGTGAGACCGTTTTCCGCAGCCAGTCCGTTCTCTTTGGCGTACTCTCTACTGTAGGCTATGTCGGTATTGTCTACGAAGCATGGTTTGGTTCCGCCAAGAAATTGGCCGTCAATTCTAACGACCCGAAGCTACTTGGTGCCATCAAAGCTCTTGGTTGGTTCGTTCTCGCAGGTTGGGCCATCTACCCAAGCTTGCGCGCA CAQFHRYIDWILTVPLMCVEFYLILRAVGAKQILLWKMIGYSLIMLIFGYLGETVFRSQSVLFGVLSTVGYVGIVYEAWFGSAKKLAVNSNDPKLLGAIKALGWFVLAGWAIYPSLRA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCGCGCAATTCCATAGGTACATAGATTGG------------------------ATCCTGACCGTTCCATTGATGTGTGTTGAATTCTACCTGATTCTACGTGCC---------GTT------GGTGCCAAACAA---ATTCTG------------------------------------CTATGGAAG---ATGATCGGTTACTCTTTGATCATGCTTATCTTCGGTTACTTAGGTGAG---------ACC------------------GTT------TTCCGC------------------------------------------------------------------------------------------------AGCCAGTCC------------------GTTCTCTTT---GGCGTACTCTCTACTGTAGGCTATGTCGGTATTGTCTACGAAGCA---------------TGG------TTT---GGTTCCGCCAAGAAATTGGCCGTCAAT------TCT---AACGACCCGAAGCTA---CTT---GGT---GCC---ATC---AAA---GCTCTT---GGTTGGTTCGTTCTCGCA---------------------------------------------------------------GGTTGG---------GCCATCTACCCAAGCTTGCGCGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAQFHRYIDW--------ILTVPLMCVEFYLILRA---V--GAKQ-IL------------LWK-MIGYSLIMLIFGYLGE---T------V--FR--------------------------------SQS------VLF-GVLSTVGYVGIVYEA-----W--F-GSAKKLAVN--S-NDPKL-L-G-A-I-K-AL-GWFVLA---------------------GW---AIYPSLRA---------------------------------------------------------------------------------------------- [II-CFB-Cyclobacteriaceae]_GU338822 [II-CFB-Cyclobacteriaceae] GHC6B21_env_samples_GU338822 gi|283574516|gb|GU338822| Uncultured Antarctic sea ice bacterium clone GHC6B21 putative proteorhodopsin gene, partial cds Uncultured Antarctic sea ice bacterium clone GHC6B21 putative proteorhodopsin gene, partial cds GU338822 [[proteorhodopsin super-cluster II/CFB-like cluster/Cyclobacteriaceae-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Cyclobacteriaceae-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:219048 genomic_DNA other 27Aug-2010 #na bottom_sea_ice Antarctic Ocean marine -77.016667 162.866667 Proteorhodopsinbearing bacteria in Antarctic sea ice Koh,E.Y., AtamnaIsmaeel,N., Martin,A., Cowie,R.O., Beja,O., Davy,S.K., Maas,E.W. and Ryan,K.G. Appl. Environ. Microbiol. 76 (17), 59185925 (2010) 20601510 #na TGCGCGCAATTCTTAAGGTACATAGACTGGATCCTGACCGTTCCATTGATGTGTGTTGAATTCTACCTGATTCTACGTGCCGTTGGTGCCAAACAAATTCTGCTATGGAAGATGATCGGTTACTCTTTGATCATGCTTATCTTCGGTTACTTAGGTGAGACCGTTTTCCGCAGCCAGTCCGTTCTCTTTGGCGTACTCTCTACTGTAGGCTATGTCGGTATTGTCTACGAAGCATGGTTTGGTTCCGCCAAGAAATTGGCCGTCAATTCTAACGACCCGAAGCTACTTGGTGCCATCAAAGCTCTTGGTTGGTTCGTTCTCGCAGGGTGGGCAATCTACCCAAGCTTGCGCCGC CAQFLRYIDWILTVPLMCVEFYLILRAVGAKQILLWKMIGYSLIMLIFGYLGETVFRSQSVLFGVLSTVGYVGIVYEAWFGSAKKLAVNSNDPKLLGAIKALGWFVLAGWAIYPSLRR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCGCGCAATTCTTAAGGTACATAGACTGG------------------------ATCCTGACCGTTCCATTGATGTGTGTTGAATTCTACCTGATTCTACGTGCC---------GTT------GGTGCCAAACAA---ATTCTG------------------------------------CTATGGAAG---ATGATCGGTTACTCTTTGATCATGCTTATCTTCGGTTACTTAGGTGAG---------ACC------------------GTT------TTCCGC------------------------------------------------------------------------------------------------AGCCAGTCC------------------GTTCTCTTT---GGCGTACTCTCTACTGTAGGCTATGTCGGTATTGTCTACGAAGCA---------------TGG------TTT---GGTTCCGCCAAGAAATTGGCCGTCAAT------TCT---AACGACCCGAAGCTA---CTT---GGT---GCC---ATC---AAA---GCTCTT---GGTTGGTTCGTTCTCGCA---------------------------------------------------------------GGGTGG---------GCAATCTACCCAAGCTTGCGCCGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAQFLRYIDW--------ILTVPLMCVEFYLILRA---V--GAKQ-IL------------LWK-MIGYSLIMLIFGYLGE---T------V--FR--------------------------------SQS------VLF-GVLSTVGYVGIVYEA-----W--F-GSAKKLAVN--S-NDPKL-L-G-A-I-K-AL-GWFVLA---------------------GW---AIYPSLRR---------------------------------------------------------------------------------------------- [II-CFB-Cyclobacteriaceae]_GU338816 [II-CFB-Cyclobacteriaceae] GHC1B34_env_samples_GU338816 gi|283574504|gb|GU338816| Uncultured Antarctic sea ice bacterium clone GHC1B34 putative proteorhodopsin gene, partial cds Uncultured Antarctic sea ice bacterium clone GHC1B34 putative proteorhodopsin gene, partial cds GU338816 [[proteorhodopsin super-cluster II/CFB-like cluster/Cyclobacteriaceae-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Cyclobacteriaceae-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:219048 genomic_DNA other 27Aug-2010 #na bottom_sea_ice Antarctic Ocean marine -77.016667 162.866667 Proteorhodopsinbearing bacteria in Antarctic sea ice Koh,E.Y., AtamnaIsmaeel,N., Martin,A., Cowie,R.O., Beja,O., Davy,S.K., Maas,E.W. and Ryan,K.G. Appl. Environ. Microbiol. 76 (17), 59185925 (2010) 20601510 #na GCGCAATTCATTCGGTACATTGACTGGATCCTGACCGTTCCATTGATGTGTGTTGAATTCTACCTGATTCTACGTGCCGTTGGTGCCAAACAAATTCTGCTATGGAAGATGATCGGTTACTCTTTGATCATGCTTATCTTCGGTTACTTAGGTGAGACCGTTTTCCGCAGCCAGTCCGTTCTCTTTGGCGTACTCTCTACTGTAGGCTATGTCGGTATTGTCTACGAAGCATGGTTTGGTTCCGCCAAGAAATTGGCCGTCAATTCTAACGACCCGAAGCTACTTGGTGCCATCAAAGCTCTTGGTTGGTTCGTTCTCGCAGGATGGGCCATCTACCCAAGCTTGCGCGCA AQFIRYIDWILTVPLMCVEFYLILRAVGAKQILLWKMIGYSLIMLIFGYLGETVFRSQSVLFGVLSTVGYVGIVYEAWFGSAKKLAVNSNDPKLLGAIKALGWFVLAGWAIYPSLRA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCAATTCATTCGGTACATTGACTGG------------------------ATCCTGACCGTTCCATTGATGTGTGTTGAATTCTACCTGATTCTACGTGCC---------GTT------GGTGCCAAACAA---ATTCTG------------------------------------CTATGGAAG---ATGATCGGTTACTCTTTGATCATGCTTATCTTCGGTTACTTAGGTGAG---------ACC------------------GTT------TTCCGC------------------------------------------------------------------------------------------------AGCCAGTCC------------------GTTCTCTTT---GGCGTACTCTCTACTGTAGGCTATGTCGGTATTGTCTACGAAGCA---------------TGG------TTT---GGTTCCGCCAAGAAATTGGCCGTCAAT------TCT---AACGACCCGAAGCTA---CTT---GGT---GCC---ATC---AAA---GCTCTT---GGTTGGTTCGTTCTCGCA---------------------------------------------------------------GGATGG---------GCCATCTACCCAAGCTTGCGCGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AQFIRYIDW--------ILTVPLMCVEFYLILRA---V--GAKQ-IL------------LWK-MIGYSLIMLIFGYLGE---T------V--FR--------------------------------SQS------VLF-GVLSTVGYVGIVYEA-----W--F-GSAKKLAVN--S-NDPKL-L-G-A-I-K-AL-GWFVLA---------------------GW---AIYPSLRA---------------------------------------------------------------------------------------------- [II-CFB-Cyclobacteriaceae]_GU338820 [II-CFB-Cyclobacteriaceae] GHC6B18_env_samples_GU338820 gi|283574512|gb|GU338820| Uncultured Antarctic sea ice bacterium clone GHC6B18 putative proteorhodopsin gene, partial cds Uncultured Antarctic sea ice bacterium clone GHC6B18 putative proteorhodopsin gene, partial cds GU338820 [[proteorhodopsin super-cluster II/CFB-like cluster/Cyclobacteriaceae-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Cyclobacteriaceae-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:219048 genomic_DNA other 27Aug-2010 #na bottom_sea_ice Antarctic Ocean marine -77.016667 162.866667 Proteorhodopsinbearing bacteria in Antarctic sea ice Koh,E.Y., AtamnaIsmaeel,N., Martin,A., Cowie,R.O., Beja,O., Davy,S.K., Maas,E.W. and Ryan,K.G. Appl. Environ. Microbiol. 76 (17), 59185925 (2010) 20601510 #na TGCGCGCAATTCATTCGGTACATTGACTGGCTCCTTACGGTACCATTGATGTGTGTAGAGTTTTATATCATACTCCGTGCAGTAGGTGCAAAGCCAATTCTGCTATGGAAGATGATTTTCTTCTCTGTATGGATGTTGGTAGCAGGTTTCTTGGGAGAAACCGTTTTCCGCGAAAGCAGCGTACTGTGGGGTGTCATTTCTACCCTCGGTTACGTAGGTATTTTGTATGAAGTATGGTTAGGATCTGCTTCCAAGTTGGCTAGCAGCTCCAATGATCCGCGTTTGCAAGGAGCTATCCGCGCACTAGGTTGGTTCCTATTAGTAGGTTGGGCCATCTATCCAAGCTTGCGCGCA CAQFIRYIDWLLTVPLMCVEFYIILRAVGAKPILLWKMIFFSVWMLVAGFLGETVFRESSVLWGVISTLGYVGILYEVWLGSASKLASSSNDPRLQGAIRALGWFLLVGWAIYPSLRA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCGCGCAATTCATTCGGTACATTGACTGG------------------------CTCCTTACGGTACCATTGATGTGTGTAGAGTTTTATATCATACTCCGTGCA---------GTA------GGTGCAAAGCCA---ATTCTG------------------------------------CTATGGAAG---ATGATTTTCTTCTCTGTATGGATGTTGGTAGCAGGTTTCTTGGGAGAA---------ACC------------------GTT------TTCCGC------------------------------------------------------------------------------------------------GAAAGCAGC------------------GTACTGTGG---GGTGTCATTTCTACCCTCGGTTACGTAGGTATTTTGTATGAAGTA---------------TGG------TTA---GGATCTGCTTCCAAGTTGGCTAGCAGC------TCC---AATGATCCGCGTTTG---CAA---GGA---GCT---ATC---CGC---GCACTA---GGTTGGTTCCTATTAGTA---------------------------------------------------------------GGTTGG---------GCCATCTATCCAAGCTTGCGCGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAQFIRYIDW--------LLTVPLMCVEFYIILRA---V--GAKP-IL------------LWK-MIFFSVWMLVAGFLGE---T------V--FR--------------------------------ESS------VLW-GVISTLGYVGILYEV-----W--L-GSASKLASS--S-NDPRL-Q-G-A-I-R-AL-GWFLLV---------------------GW---AIYPSLRA---------------------------------------------------------------------------------------------- [II-CFB-Cyclobacteriaceae]_GU338826 [II-CFB-Cyclobacteriaceae] GHC6B5_env_samples_GU338826 gi|283574524|gb|GU338826| Uncultured Antarctic sea ice bacterium clone GHC6B5 putative proteorhodopsin gene, partial cds Uncultured Antarctic sea ice bacterium clone GHC6B5 putative proteorhodopsin gene, partial cds GU338826 [[proteorhodopsin super-cluster II/CFB-like cluster/Cyclobacteriaceae-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Cyclobacteriaceae-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:219048 genomic_DNA other 27Aug-2010 #na bottom_sea_ice Antarctic Ocean marine -77.016667 162.866667 Proteorhodopsinbearing bacteria in Antarctic sea ice Koh,E.Y., AtamnaIsmaeel,N., Martin,A., Cowie,R.O., Beja,O., Davy,S.K., Maas,E.W. and Ryan,K.G. Appl. Environ. Microbiol. 76 (17), 59185925 (2010) 20601510 #na TGCGCGCAATTCATGAGATATATTGACTGGCTCCTTACGGTACCATTGATGTGTGTAGAGTTTTATATCATACTCCGTGCAGTAGGTGCAAAGCCAATTCTGCTATGGAAGATGATTTTCTTCTCTGTATGGATGTTGGTAGCAGGTTTCTTGGGAGAAACCGTTTTCCGCGAAAGCAGCGTACTGTGGGGTGTCATTTCTACCCTCGGTTACGTAGGTATTTTGTATGAAGTATGGTTAGGATCTGCTTCCAAGTTGGCTAGCAACTCCAATGATCCGCGTTTGCAAGGAGCTATCCGCGCACTAGGTTGGTTCCTATTAGTAGGATGGGCTATTTACCCAAGCTTGCGCGCA CAQFMRYIDWLLTVPLMCVEFYIILRAVGAKPILLWKMIFFSVWMLVAGFLGETVFRESSVLWGVISTLGYVGILYEVWLGSASKLASNSNDPRLQGAIRALGWFLLVGWAIYPSLRA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCGCGCAATTCATGAGATATATTGACTGG------------------------CTCCTTACGGTACCATTGATGTGTGTAGAGTTTTATATCATACTCCGTGCA---------GTA------GGTGCAAAGCCA---ATTCTG------------------------------------CTATGGAAG---ATGATTTTCTTCTCTGTATGGATGTTGGTAGCAGGTTTCTTGGGAGAA---------ACC------------------GTT------TTCCGC------------------------------------------------------------------------------------------------GAAAGCAGC------------------GTACTGTGG---GGTGTCATTTCTACCCTCGGTTACGTAGGTATTTTGTATGAAGTA---------------TGG------TTA---GGATCTGCTTCCAAGTTGGCTAGCAAC------TCC---AATGATCCGCGTTTG---CAA---GGA---GCT---ATC---CGC---GCACTA---GGTTGGTTCCTATTAGTA---------------------------------------------------------------GGATGG---------GCTATTTACCCAAGCTTGCGCGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAQFMRYIDW--------LLTVPLMCVEFYIILRA---V--GAKP-IL------------LWK-MIFFSVWMLVAGFLGE---T------V--FR--------------------------------ESS------VLW-GVISTLGYVGILYEV-----W--L-GSASKLASN--S-NDPRL-Q-G-A-I-R-AL-GWFLLV---------------------GW---AIYPSLRA---------------------------------------------------------------------------------------------- [II-CFB-Cyclobacteriaceae]_EU563312 [II-CFB-Cyclobacteriaceae] kin_2m_Jan07C_env_samples_EU563312 gi|171770634|gb|EU563312| Uncultured microorganism clone kin 2m Jan07C putative proteorhodopsin gene, partial cds Uncultured microorganism clone kin 2m Jan07C putative proteorhodopsin gene, partial cds EU563312 [[proteorhodopsin super-cluster II/CFB-like cluster/Cyclobacteriaceae-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Cyclobacteriaceae-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 01-janv-07 Lake_Kinneret_at_2m_depth other freshwater 32.08 35.07 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na AGGTATATAGACTGGATTCTTACCGTACCATTAATGTGCGTTGAATTTTATTTGATTTTAAAAGCATTTGGTGCAACTATTTCCTTGCTATGGAAAATGATTGGCTACTCCTTATTAATGCTTATCGCTGGTTATTTGGGTGAAACTGTTTACCGTGATCAGTCCGTGATGTGGGGTTTCATTTCAACTATCGGTTATGTAGGTATTTTGTATGAAGTATGGATGGGATCAGCTAAGAAATTAGCAGGAAACTCAAATGATCCGGCTCTACAAGGTGCTTTCAAAACACTTGGCTGGTTTGTATTGGCTGGACTATCTACC RYIDWILTVPLMCVEFYLILKAFGATISLLWKMIGYSLLMLIAGYLGETVYRDQSVMWGFISTIGYVGILYEVWMGSAKKLAGNSNDPALQGAFKTLGWFVLAGLST ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTATATAGACTGG------------------------ATTCTTACCGTACCATTAATGTGCGTTGAATTTTATTTGATTTTAAAAGCA---------TTT------GGTGCAACTATT---TCCTTG------------------------------------CTATGGAAA---ATGATTGGCTACTCCTTATTAATGCTTATCGCTGGTTATTTGGGTGAA---------ACT------------------GTT------TACCGT------------------------------------------------------------------------------------------------GATCAGTCC------------------GTGATGTGG---GGTTTCATTTCAACTATCGGTTATGTAGGTATTTTGTATGAAGTA---------------TGG------ATG---GGATCAGCTAAGAAATTAGCAGGAAAC------TCA---AATGATCCGGCTCTA---CAA---GGT---GCT---TTC---AAA---ACACTT---GGCTGGTTTGTATTGGCT---------------------------------------------------------------GGACTA---------TCTACC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------ILTVPLMCVEFYLILKA---F--GATI-SL------------LWK-MIGYSLLMLIAGYLGE---T------V--YR--------------------------------DQS------VMW-GFISTIGYVGILYEV-----W--M-GSAKKLAGN--S-NDPAL-Q-G-A-F-K-TL-GWFVLA---------------------GL---ST---------------------------------------------------------------------------------------------------- [II-CFB-Cyclobacteriaceae]_HQ663727 [II-CFB-Cyclobacteriaceae] SCGC_AAA023B19_Bacteroidetes_HQ663727 gi|325163054|gb|HQ663727| Bacteroidetes bacterium SCGC AAA023B19 rhodopsin gene, partial cds Bacteroidetes bacterium SCGC AAA023B19 rhodopsin gene, partial cds HQ663727 [[proteorhodopsin super-cluster II/CFB-like cluster/Cyclobacteriaceae-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Cyclobacteriaceae-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes] taxon:938673 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Sparkling other freshwater 46.0095 -89.7006 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTGGATTGGATTTTAACTGTACCATTAATGTGCGTTGAGTTCTATTTAATCTTAAAGGCATTTGGTGCTACTGTATCATTGTTATGGAAGATGATTGCTTACTCATTATTGATGTTGATTGCTGGTTATTTAGGTGAAACTATTTACCGTGAGCAGTCAGTATTATGGGGTTTCATTTCAACTATCGGATACGTAGGTATTCTTTATGAAGTATGGTTAGGATCAGCTAAGAAATTAGCTGGAAACTCAAATGACCCAGCATTACAAGGTGCATTCAAGACATTAGGTTGGTTCGTATTAGTTGGTGGGGCGTCTACCCGATGGTCA YVDWILTVPLMCVEFYLILKAFGATVSLLWKMIAYSLLMLIAGYLGETIYREQSVLWGFISTIGYVGILYEVWLGSAKKLAGNSNDPALQGAFKTLGWFVLVGGASTRWS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTGGATTGG------------------------ATTTTAACTGTACCATTAATGTGCGTTGAGTTCTATTTAATCTTAAAGGCA---------TTT------GGTGCTACTGTA---TCATTG------------------------------------TTATGGAAG---ATGATTGCTTACTCATTATTGATGTTGATTGCTGGTTATTTAGGTGAA---------ACT------------------ATT------TACCGT------------------------------------------------------------------------------------------------GAGCAGTCA------------------GTATTATGG---GGTTTCATTTCAACTATCGGATACGTAGGTATTCTTTATGAAGTA---------------TGG------TTA---GGATCAGCTAAGAAATTAGCTGGAAAC------TCA---AATGACCCAGCATTA---CAA---GGT---GCA---TTC---AAG---ACATTA---GGTTGGTTCGTATTAGTT---------------------------------------------------------------GGTGGG---------GCGTCTACCCGATGGTCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------ILTVPLMCVEFYLILKA---F--GATV-SL------------LWK-MIAYSLLMLIAGYLGE---T------I--YR--------------------------------EQS------VLW-GFISTIGYVGILYEV-----W--L-GSAKKLAGN--S-NDPAL-Q-G-A-F-K-TL-GWFVLV---------------------GG---ASTRWS------------------------------------------------------------------------------------------------ [II-CFB-Cyclobacteriaceae]_FJ862926 [II-CFB-Cyclobacteriaceae] 16_env_samples_FJ862926 gi|226897396|gb|FJ862926| Uncultured bacterium clone 16 putative proteorhodopsin gene, partial cds Uncultured bacterium clone 16 putative proteorhodopsin gene, partial cds FJ862926 [[proteorhodopsin super-cluster II/CFB-like cluster/Cyclobacteriaceae-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Cyclobacteriaceae-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 07-Dec-2009 #na coastal_seawater Atlantic Ocean marine 38.8489 -75.1076 Lightdependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTAGACTGGATATTAACCGTTCCACTAATGTGCGTTGAGTTTTACTTGATTCTAAAAGCCTTTGGAGCAAAAATTGGTCTATTGTGGAAAATGATTTTCTATTCCTTATGGATGTTGGTTGCTGGATTTTTAGGAGAAACAGTTTTCAGAGAAAGTTCGCCAATGTGGGGGATGATATCTACTATTGGTTACCTAGGCATTCTTTACGAAGTATGGCTCGGTTCGGCTAGTAAGTTAGCTAATAATTCTAATGACCCTATTTTACAGTCCGCATTCAAATCCCTAGGCTGGTTTATTTTTGCTGGCTGGGCTATTTATGCTCGA VDWILTVPLMCVEFYLILKAFGAKIGLLWKMIFYSLWMLVAGFLGETVFRESSPMWGMISTIGYLGILYEVWLGSASKLANNSNDPILQSAFKSLGWFIFAGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGACTGG------------------------ATATTAACCGTTCCACTAATGTGCGTTGAGTTTTACTTGATTCTAAAAGCC---------TTT------GGAGCAAAAATT---GGTCTA------------------------------------TTGTGGAAA---ATGATTTTCTATTCCTTATGGATGTTGGTTGCTGGATTTTTAGGAGAA---------ACA------------------GTT------TTCAGA------------------------------------------------------------------------------------------------GAAAGTTCG------------------CCAATGTGG---GGGATGATATCTACTATTGGTTACCTAGGCATTCTTTACGAAGTA---------------TGG------CTC---GGTTCGGCTAGTAAGTTAGCTAATAAT------TCT---AATGACCCTATTTTA---CAG---TCC---GCA---TTC---AAA---TCCCTA---GGCTGGTTTATTTTTGCT---------------------------------------------------------------GGCTGG---------GCTATTTATGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------ILTVPLMCVEFYLILKA---F--GAKI-GL------------LWK-MIFYSLWMLVAGFLGE---T------V--FR--------------------------------ESS------PMW-GMISTIGYLGILYEV-----W--L-GSASKLANN--S-NDPIL-Q-S-A-F-K-SL-GWFIFA---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [II-CFB-Cyclobacteriaceae]_FJ862933 [II-CFB-Cyclobacteriaceae] 26_env_samples_FJ862933 gi|226897410|gb|FJ862933| Uncultured bacterium clone 26 putative proteorhodopsin gene, partial cds Uncultured bacterium clone 26 putative proteorhodopsin gene, partial cds FJ862933 [[proteorhodopsin super-cluster II/CFB-like cluster/Cyclobacteriaceae-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Cyclobacteriaceae-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 07-Dec-2009 #na coastal_seawater Atlantic Ocean marine 38.8489 -75.1076 Lightdependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTAGACTGGATATTAACCGTTCCACTAATGTGCGTTGAGTTTTACTTGATTCTAAAAGCCTTTGGAGCAAAAATTGGTCTATTGTGGAAAATGATTTTCTATTCCTTATGGATGTTGGTTGCTGGATTTTTAGGAGAAACAGTTTTCAGAGAAAGTTCGCCAATGTGGGGGATGATATCTACTATTGGTTACCTAGGCATTCTTTACGAAGTATGGCTCGGTTCGGCTAGTAAGTTAGCTAATAATTCTAATGACCCTATTTTACAGTCCGCATTCAAATCCCTAGGCTGGTTTATTTTTGCTGGCTGGGCTATTTATGCTCGA VDWILTVPLMCVEFYLILKAFGAKIGLLWKMIFYSLWMLVAGFLGETVFRESSPMWGMISTIGYLGILYEVWLGSASKLANNSNDPILQSAFKSLGWFIFAGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGACTGG------------------------ATATTAACCGTTCCACTAATGTGCGTTGAGTTTTACTTGATTCTAAAAGCC---------TTT------GGAGCAAAAATT---GGTCTA------------------------------------TTGTGGAAA---ATGATTTTCTATTCCTTATGGATGTTGGTTGCTGGATTTTTAGGAGAA---------ACA------------------GTT------TTCAGA------------------------------------------------------------------------------------------------GAAAGTTCG------------------CCAATGTGG---GGGATGATATCTACTATTGGTTACCTAGGCATTCTTTACGAAGTA---------------TGG------CTC---GGTTCGGCTAGTAAGTTAGCTAATAAT------TCT---AATGACCCTATTTTA---CAG---TCC---GCA---TTC---AAA---TCCCTA---GGCTGGTTTATTTTTGCT---------------------------------------------------------------GGCTGG---------GCTATTTATGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------ILTVPLMCVEFYLILKA---F--GAKI-GL------------LWK-MIFYSLWMLVAGFLGE---T------V--FR--------------------------------ESS------PMW-GMISTIGYLGILYEV-----W--L-GSASKLANN--S-NDPIL-Q-S-A-F-K-SL-GWFIFA---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [II-CFB-Cyclobacteriaceae]_FJ862941 [II-CFB-Cyclobacteriaceae] 39_env_samples_FJ862941 gi|226897426|gb|FJ862941| Uncultured bacterium clone 39 putative proteorhodopsin gene, partial cds Uncultured bacterium clone 39 putative proteorhodopsin gene, partial cds FJ862941 [[proteorhodopsin super-cluster II/CFB-like cluster/Cyclobacteriaceae-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Cyclobacteriaceae-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 07-Dec-2009 #na coastal_seawater Atlantic Ocean marine 38.8489 -75.1076 Lightdependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na ATCGACTGGATATTAACCGTTCCACTAATGTGCGTTGAGTTTTACTTGATTCTAAAAGCCTTTGGAGCAAAAATTGGTCTATTGTGGAAAATGATTTTCTATTCCTTATGGATGTTGGTTGCTGGATTTTTAGGAGAAACAGTTTTCAGAGAAAGTTCGCCAATGTGGGGGATGATATCTACTATTGGTTACCTAGGCATTCTTTACGAAGTATGGCTCGGTTCGGCTAGTAAGTTAGCTAATAATTCCAATGACCCTATTTTACAGTCCGCATTCAAATCCCTAGGCTGGTTTATTTTTGCTGGCTGGGCAATATATGCTCGA IDWILTVPLMCVEFYLILKAFGAKIGLLWKMIFYSLWMLVAGFLGETVFRESSPMWGMISTIGYLGILYEVWLGSASKLANNSNDPILQSAFKSLGWFIFAGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCGACTGG------------------------ATATTAACCGTTCCACTAATGTGCGTTGAGTTTTACTTGATTCTAAAAGCC---------TTT------GGAGCAAAAATT---GGTCTA------------------------------------TTGTGGAAA---ATGATTTTCTATTCCTTATGGATGTTGGTTGCTGGATTTTTAGGAGAA---------ACA------------------GTT------TTCAGA------------------------------------------------------------------------------------------------GAAAGTTCG------------------CCAATGTGG---GGGATGATATCTACTATTGGTTACCTAGGCATTCTTTACGAAGTA---------------TGG------CTC---GGTTCGGCTAGTAAGTTAGCTAATAAT------TCC---AATGACCCTATTTTA---CAG---TCC---GCA---TTC---AAA---TCCCTA---GGCTGGTTTATTTTTGCT---------------------------------------------------------------GGCTGG---------GCAATATATGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDW--------ILTVPLMCVEFYLILKA---F--GAKI-GL------------LWK-MIFYSLWMLVAGFLGE---T------V--FR--------------------------------ESS------PMW-GMISTIGYLGILYEV-----W--L-GSASKLANN--S-NDPIL-Q-S-A-F-K-SL-GWFIFA---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [II-CFB-Cyclobacteriaceae]_FJ862966 [II-CFB-Cyclobacteriaceae] clone_23_FJ862966 gi|226897332|gb|FJ862966| Uncultured bacterium clone 23 putative proteorhodopsin mRNA, partial cds. Uncultured bacterium clone 23 putative proteorhodopsin mRNA, partial cds. FJ862966 [[proteorhodopsin super-cluster II/CFB-like cluster/Cyclobacteriaceae-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Cyclobacteriaceae-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 mRNA other 07-DEC-2009 #na coastal seawater Atlantic Ocean marine 38.8489 -75.1076 Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTTGATTGGATATTAACCGTTCCACTAATGTGCGTTGAGTTTTGCTTGATTCTAAAAGCCTTTGGAGCAAAAATTGGTCTATTGTGGAAAATGATTTTCTATTCCTTATGGATGTTGGTTGCTGGATTTTTAGGAGAAACAGTTTTCAGAGAAAGTTCGCCAATGTGGGGGATGATATCAACTATTGGTTACCTAGGCATTCTTTACGAAGTATGGCTCGGTTCGGCTAGTAAGTTAGCTAATAATTCCAATGACCCTATTTTACAGTCCGCATTCAAATCCCTAGGCTGGTTTATTTTTGCTGGCTGGGCAATCTATGCTCGA VDWILTVPLMCVEFCLILKAFGAKIGLLWKMIFYSLWMLVAGFLGETVFRESSPMWGMISTIGYLGILYEVWLGSASKLANNSNDPILQSAFKSLGWFIFAGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGATTGG------------------------ATATTAACCGTTCCACTAATGTGCGTTGAGTTTTGCTTGATTCTAAAAGCC---------TTT------GGAGCAAAAATT---GGTCTA------------------------------------TTGTGGAAA---ATGATTTTCTATTCCTTATGGATGTTGGTTGCTGGATTTTTAGGAGAA---------ACA------------------GTT------TTCAGA------------------------------------------------------------------------------------------------GAAAGTTCG------------------CCAATGTGG---GGGATGATATCAACTATTGGTTACCTAGGCATTCTTTACGAAGTA---------------TGG------CTC---GGTTCGGCTAGTAAGTTAGCTAATAAT------TCC---AATGACCCTATTTTA---CAG---TCC---GCA---TTC---AAA---TCCCTA---GGCTGGTTTATTTTTGCT---------------------------------------------------------------GGCTGG---------GCAATCTATGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------ILTVPLMCVEFCLILKA---F--GAKI-GL------------LWK-MIFYSLWMLVAGFLGE---T------V--FR--------------------------------ESS------PMW-GMISTIGYLGILYEV-----W--L-GSASKLANN--S-NDPIL-Q-S-A-F-K-SL-GWFIFA---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [II-CFB-Cyclobacteriaceae]_FJ862935 [II-CFB-Cyclobacteriaceae] 30_env_samples_FJ862935 gi|226897414|gb|FJ862935| Uncultured bacterium clone 30 putative proteorhodopsin gene, partial cds Uncultured bacterium clone 30 putative proteorhodopsin gene, partial cds FJ862935 [[proteorhodopsin super-cluster II/CFB-like cluster/Cyclobacteriaceae-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Cyclobacteriaceae-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 07-Dec-2009 #na coastal_seawater Atlantic Ocean marine 38.8489 -75.1076 Lightdependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTTGATTGGATATTAACCGTTCCACTAATGTGCGTTGAGTTTTACTTGATTCTAAAAGCCTTTGGAGCAAAAATTGGTCTATTGTGGAAAATGATTTTCTATTCCTTATGGATGTTGGTTGCTGGATTTTTAGGAGAAACAGTTTTCAGAGAAAGTTCGCCAATGTGGGGGATGATATCTACTATTGGTTACCTAGGCATTCTTTACGAAGTATGGCTCGGTTCGGCTAGTAAGTTAGCTAATAATTCCAATGACCCTATTTTACAGTCCGCATTCAAATCCCTAGGCTGGTTTATTTTTGCTGGGTGGGCCATATATGCTCGA VDWILTVPLMCVEFYLILKAFGAKIGLLWKMIFYSLWMLVAGFLGETVFRESSPMWGMISTIGYLGILYEVWLGSASKLANNSNDPILQSAFKSLGWFIFAGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGATTGG------------------------ATATTAACCGTTCCACTAATGTGCGTTGAGTTTTACTTGATTCTAAAAGCC---------TTT------GGAGCAAAAATT---GGTCTA------------------------------------TTGTGGAAA---ATGATTTTCTATTCCTTATGGATGTTGGTTGCTGGATTTTTAGGAGAA---------ACA------------------GTT------TTCAGA------------------------------------------------------------------------------------------------GAAAGTTCG------------------CCAATGTGG---GGGATGATATCTACTATTGGTTACCTAGGCATTCTTTACGAAGTA---------------TGG------CTC---GGTTCGGCTAGTAAGTTAGCTAATAAT------TCC---AATGACCCTATTTTA---CAG---TCC---GCA---TTC---AAA---TCCCTA---GGCTGGTTTATTTTTGCT---------------------------------------------------------------GGGTGG---------GCCATATATGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------ILTVPLMCVEFYLILKA---F--GAKI-GL------------LWK-MIFYSLWMLVAGFLGE---T------V--FR--------------------------------ESS------PMW-GMISTIGYLGILYEV-----W--L-GSASKLANN--S-NDPIL-Q-S-A-F-K-SL-GWFIFA---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [II-CFB-Cyclobacteriaceae]_FJ862932 [II-CFB-Cyclobacteriaceae] 25_env_samples_FJ862932 gi|226897408|gb|FJ862932| Uncultured bacterium clone 25 putative proteorhodopsin gene, partial cds Uncultured bacterium clone 25 putative proteorhodopsin gene, partial cds FJ862932 [[proteorhodopsin super-cluster II/CFB-like cluster/Cyclobacteriaceae-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Cyclobacteriaceae-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 07-Dec-2009 #na coastal_seawater Atlantic Ocean marine 38.8489 -75.1076 Lightdependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTTGACTGGATATTAACCGTTCCACTAATGTGCGTTGAGTTTTACTTGATTCTAAAAGCCTTTGGAGCAAAAATTGGTCTATTGTGGAAAATGATTTTCTATTCCTTATGGATGTTGGTTGCTGGATTTTTAGGAGAAACAGTTTTCAGAGAAAGTTCGCCAACGTGGGGGATGATATCTACTATTGGTTACCTAGGCATTCTTTACGAAGTATGGCTCGGTTCGGCTAGTAAGTTAGCTAATAATTCCAATGACCCTATTTTACAGTCCGCATTCAAATCCCTAGGCTGGTTTATTTTTGCTGGGTGGGCCATCTACGCTCGA VDWILTVPLMCVEFYLILKAFGAKIGLLWKMIFYSLWMLVAGFLGETVFRESSPTWGMISTIGYLGILYEVWLGSASKLANNSNDPILQSAFKSLGWFIFAGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGACTGG------------------------ATATTAACCGTTCCACTAATGTGCGTTGAGTTTTACTTGATTCTAAAAGCC---------TTT------GGAGCAAAAATT---GGTCTA------------------------------------TTGTGGAAA---ATGATTTTCTATTCCTTATGGATGTTGGTTGCTGGATTTTTAGGAGAA---------ACA------------------GTT------TTCAGA------------------------------------------------------------------------------------------------GAAAGTTCG------------------CCAACGTGG---GGGATGATATCTACTATTGGTTACCTAGGCATTCTTTACGAAGTA---------------TGG------CTC---GGTTCGGCTAGTAAGTTAGCTAATAAT------TCC---AATGACCCTATTTTA---CAG---TCC---GCA---TTC---AAA---TCCCTA---GGCTGGTTTATTTTTGCT---------------------------------------------------------------GGGTGG---------GCCATCTACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------ILTVPLMCVEFYLILKA---F--GAKI-GL------------LWK-MIFYSLWMLVAGFLGE---T------V--FR--------------------------------ESS------PTW-GMISTIGYLGILYEV-----W--L-GSASKLANN--S-NDPIL-Q-S-A-F-K-SL-GWFIFA---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [II-CFB-Cyclobacteriaceae]_GU338812 [II-CFB-Cyclobacteriaceae] GHB120A7_env_samples_GU338812 gi|283574496|gb|GU338812| Uncultured Antarctic sea ice bacterium clone GHB120A7 putative proteorhodopsin gene, partial cds Uncultured Antarctic sea ice bacterium clone GHB120A7 putative proteorhodopsin gene, partial cds GU338812 [[proteorhodopsin super-cluster II/CFB-like cluster/Cyclobacteriaceae-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Cyclobacteriaceae-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:219048 genomic_DNA other 27Aug-2010 #na middle_brine Antarctic Ocean marine -77.016667 162.866667 Proteorhodopsinbearing bacteria in Antarctic sea ice Koh,E.Y., AtamnaIsmaeel,N., Martin,A., Cowie,R.O., Beja,O., Davy,S.K., Maas,E.W. and Ryan,K.G. Appl. Environ. Microbiol. 76 (17), 59185925 (2010) 20601510 #na TGCGCGCAATTCTTTAGTTATATTGACTGGATATTAACTGTACCATTAATGTGTGTTGAATTCTATTTAATCCTCAAAGCATTTGGTGCGAAAATGGGATTATTATGGAAGATGATTTTCTACTCATTATGGATGTTAGTAGCAGGTTATTTAGGTGAAACTGAATTTAGAGAAAGTTCTGCTATATGGGGCTTCATTTCTACTTTAGGTTACCTTGGATTAGTGTATGAAATATGGTTTGGTTCGGCTAGCAAATTAGCGAAAAATTCAAACGATCCAATTTTACAAAGTGCATTTAAAGCATTATCATGGTTCATATTAGTTGGGTGGGCAATATACCCAAGCTTGCGCGCA CAQFFSYIDWILTVPLMCVEFYLILKAFGAKMGLLWKMIFYSLWMLVAGYLGETEFRESSAIWGFISTLGYLGLVYEIWFGSASKLAKNSNDPILQSAFKALSWFILVGWAIYPSLRA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCGCGCAATTCTTTAGTTATATTGACTGG------------------------ATATTAACTGTACCATTAATGTGTGTTGAATTCTATTTAATCCTCAAAGCA---------TTT------GGTGCGAAAATG---GGATTA------------------------------------TTATGGAAG---ATGATTTTCTACTCATTATGGATGTTAGTAGCAGGTTATTTAGGTGAA---------ACT------------------GAA------TTTAGA------------------------------------------------------------------------------------------------GAAAGTTCT------------------GCTATATGG---GGCTTCATTTCTACTTTAGGTTACCTTGGATTAGTGTATGAAATA---------------TGG------TTT---GGTTCGGCTAGCAAATTAGCGAAAAAT------TCA---AACGATCCAATTTTA---CAA---AGT---GCA---TTT---AAA---GCATTA---TCATGGTTCATATTAGTT---------------------------------------------------------------GGGTGG---------GCAATATACCCAAGCTTGCGCGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAQFFSYIDW--------ILTVPLMCVEFYLILKA---F--GAKM-GL------------LWK-MIFYSLWMLVAGYLGE---T------E--FR--------------------------------ESS------AIW-GFISTLGYLGLVYEI-----W--F-GSASKLAKN--S-NDPIL-Q-S-A-F-K-AL-SWFILV---------------------GW---AIYPSLRA---------------------------------------------------------------------------------------------- [II-CFB-Cyclobacteriaceae]_EU915928 [II-CFB-Cyclobacteriaceae] clone_xd108_EU915928 gi|229358738|gb|EU915928| Uncultured bacterium clone xd108 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone xd108 putative proteorhodopsin gene, partial cds. EU915928 [[proteorhodopsin super-cluster II/CFB-like cluster/Cyclobacteriaceae-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Cyclobacteriaceae-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTAGCCGCTACTGCTTTCTTCTTTTTTGAGCGCCAACAAGTAGAAGGCAAATGGAAAACCTCCCTCCTGATTGCTGGCCTGATTACCATGATTGCATCTGTGCACTACTATTACATGCGCGATGTATGGATGACAACCGGACAATCGCCCACTCAATTCCGCTACATTGACTGGATCTTGACTGTTCCGCTCATGTGCGTGGAATTTTATTTAATCCTGAAGGCATTCGGTGCAAAAATCGAATTGCTTTGGAAAATGATTGGTTATTCTTTGTTGATGCTGATCGCAGGTTACCTTGGAGAGACTGCCTACCGCGATAACAGTGTGTTGTGGGGTATCATCTCTACAGTTGGTTACGTAGGAATTCTGTACGAAGTATGGATGGGCTCTGCGAGCAAACTGGCAAACAACTCCAATGACCCGCACCTGAAGTCTGCTTTCCGCGCCTTGGGTTGGTTTGTTTTGGTTGGTTGGGCGATCTAT MVAATAFFFFERQQVEGKWKTSLLIAGLITMIASVHYYYMRDVWMTTGQSPTQFRYIDWILTVPLMCVEFYLILKAFGAKIELLWKMIGYSLLMLIAGYLGETAYRDNSVLWGIISTVGYVGILYEVWMGSASKLANNSNDPHLKSAFRALGWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGCTTTCTTCTTTTTTGAGCGCCAACAAGTAGAAGGCAAATGGAAAACCTCCCTCCTGATTGCTGGCCTGATTACCATGATTGCATCTGTGCACTACTATTACATGCGCGATGTATGGATG---------------------------------------------------ACAACCGGACAATCGCCCACTCAATTCCGCTACATTGACTGG------------------------ATCTTGACTGTTCCGCTCATGTGCGTGGAATTTTATTTAATCCTGAAGGCA---------TTC------GGTGCAAAAATC---GAATTG------------------------------------CTTTGGAAA---ATGATTGGTTATTCTTTGTTGATGCTGATCGCAGGTTACCTTGGAGAG---------ACT------------------GCC------TACCGC------------------------------------------------------------------------------------------------GATAACAGT------------------GTGTTGTGG---GGTATCATCTCTACAGTTGGTTACGTAGGAATTCTGTACGAAGTA---------------TGG------ATG---GGCTCTGCGAGCAAACTGGCAAACAAC------TCC---AATGACCCGCACCTG---AAG---TCT---GCT---TTC---CGC---GCCTTG---GGTTGGTTTGTTTTGGTT---------------------------------------------------------------GGTTGG---------GCGATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFFERQQVEGKWKTSLLIAGLITMIASVHYYYMRDVWM-----------------TTGQSPTQFRYIDW--------ILTVPLMCVEFYLILKA---F--GAKI-EL------------LWK-MIGYSLLMLIAGYLGE---T------A--YR--------------------------------DNS------VLW-GIISTVGYVGILYEV-----W--M-GSASKLANN--S-NDPHL-K-S-A-F-R-AL-GWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-Cyclobacteriaceae]_EU915934 [II-CFB-Cyclobacteriaceae] clone_xd123_EU915934 gi|229358750|gb|EU915934| Uncultured bacterium clone xd123 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone xd123 putative proteorhodopsin gene, partial cds. EU915934 [[proteorhodopsin super-cluster II/CFB-like cluster/Cyclobacteriaceae-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Cyclobacteriaceae-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGCTTTCTTCTTTTTTGAGCGTCAACAAGTAGAAGGCAAATGGAAAACCTCCCTCCTGATTGCTGGCCTGATTACCATGATTGCATCTGTGCACTACTATTACATGCGCGATGTATGGATGACAACCGGACAATCGCCCACTCAATTCCGCTACATTGACTGGATCTTGACTGTTCCGCTCATGTGCGTGGAGTTTTATTTAATCCTGAAGGCATTCGGTGCAAAAATCGAATTGCTTTGGAAAATGATTGGTTATTCTTTGTTGATGCTGATCGCAGGTTACCTTGGAGAGACTGCCTACCGCGATAACAGTGTGTTGTGGGGTATCATCTCTACAGTTGGTTACGTAGGAATTCTGTACGAAGTATGGATGGGCTCTGCGAGCAAACTGGCAAACAACTCCAATGACCCGCACCTGAAGTCTGCTTTCCGCGCCTTGGGTTGGTTTGTTTTGGTTGGATGGGCAATCTAT MVAATAFFFFERQQVEGKWKTSLLIAGLITMIASVHYYYMRDVWMTTGQSPTQFRYIDWILTVPLMCVEFYLILKAFGAKIELLWKMIGYSLLMLIAGYLGETAYRDNSVLWGIISTVGYVGILYEVWMGSASKLANNSNDPHLKSAFRALGWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCTTTCTTCTTTTTTGAGCGTCAACAAGTAGAAGGCAAATGGAAAACCTCCCTCCTGATTGCTGGCCTGATTACCATGATTGCATCTGTGCACTACTATTACATGCGCGATGTATGGATG---------------------------------------------------ACAACCGGACAATCGCCCACTCAATTCCGCTACATTGACTGG------------------------ATCTTGACTGTTCCGCTCATGTGCGTGGAGTTTTATTTAATCCTGAAGGCA---------TTC------GGTGCAAAAATC---GAATTG------------------------------------CTTTGGAAA---ATGATTGGTTATTCTTTGTTGATGCTGATCGCAGGTTACCTTGGAGAG---------ACT------------------GCC------TACCGC------------------------------------------------------------------------------------------------GATAACAGT------------------GTGTTGTGG---GGTATCATCTCTACAGTTGGTTACGTAGGAATTCTGTACGAAGTA---------------TGG------ATG---GGCTCTGCGAGCAAACTGGCAAACAAC------TCC---AATGACCCGCACCTG---AAG---TCT---GCT---TTC---CGC---GCCTTG---GGTTGGTTTGTTTTGGTT---------------------------------------------------------------GGATGG---------GCAATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFFERQQVEGKWKTSLLIAGLITMIASVHYYYMRDVWM-----------------TTGQSPTQFRYIDW--------ILTVPLMCVEFYLILKA---F--GAKI-EL------------LWK-MIGYSLLMLIAGYLGE---T------A--YR--------------------------------DNS------VLW-GIISTVGYVGILYEV-----W--M-GSASKLANN--S-NDPHL-K-S-A-F-R-AL-GWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-Cyclobacteriaceae]_EU915926 [II-CFB-Cyclobacteriaceae] clone_xd104_EU915926 gi|229358734|gb|EU915926| Uncultured bacterium clone xd104 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone xd104 putative proteorhodopsin gene, partial cds. EU915926 [[proteorhodopsin super-cluster II/CFB-like cluster/Cyclobacteriaceae-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Cyclobacteriaceae-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGCATTCTTCTTTTTTGAGCGTCAACAAGTAGAAGGCAAATGGAAAACCTCCCTCCTGATTGCTGGCCTGATTACCATGATTGCATCTGTGCACTACTATTACATGCGCGATGTATGGATGACAACCGGACAATCGCCCACTCAATTCCGCTACATTGACTGGATCTTGACTGTTCCGCTCATGTGCGTGGAATTTTATTTAATCCTGAAGGCATTCGGTGCAAAAATCGAATTGCTTTGGAAAATGATTGGTTATTCTTTGTTGATGCTGATCGCAGGTTACCTTGGAGAGACTGCCTACCGCGATAACAGTGTGTTGTGGGGTATCATCTCTACAGTTGGTTACGTAGGAATTCTGTACGAAGTATGGATGGGCTCTGCGAGCAAACTGGCAAACAACTCCAATGACCCGCACCTGAAGTCTGCTTTCCGCGCCTTGGGTTGGTTTGTTTTGGTTGGTTGGGCAATCTAT MVAATAFFFFERQQVEGKWKTSLLIAGLITMIASVHYYYMRDVWMTTGQSPTQFRYIDWILTVPLMCVEFYLILKAFGAKIELLWKMIGYSLLMLIAGYLGETAYRDNSVLWGIISTVGYVGILYEVWMGSASKLANNSNDPHLKSAFRALGWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCATTCTTCTTTTTTGAGCGTCAACAAGTAGAAGGCAAATGGAAAACCTCCCTCCTGATTGCTGGCCTGATTACCATGATTGCATCTGTGCACTACTATTACATGCGCGATGTATGGATG---------------------------------------------------ACAACCGGACAATCGCCCACTCAATTCCGCTACATTGACTGG------------------------ATCTTGACTGTTCCGCTCATGTGCGTGGAATTTTATTTAATCCTGAAGGCA---------TTC------GGTGCAAAAATC---GAATTG------------------------------------CTTTGGAAA---ATGATTGGTTATTCTTTGTTGATGCTGATCGCAGGTTACCTTGGAGAG---------ACT------------------GCC------TACCGC------------------------------------------------------------------------------------------------GATAACAGT------------------GTGTTGTGG---GGTATCATCTCTACAGTTGGTTACGTAGGAATTCTGTACGAAGTA---------------TGG------ATG---GGCTCTGCGAGCAAACTGGCAAACAAC------TCC---AATGACCCGCACCTG---AAG---TCT---GCT---TTC---CGC---GCCTTG---GGTTGGTTTGTTTTGGTT---------------------------------------------------------------GGTTGG---------GCAATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFFERQQVEGKWKTSLLIAGLITMIASVHYYYMRDVWM-----------------TTGQSPTQFRYIDW--------ILTVPLMCVEFYLILKA---F--GAKI-EL------------LWK-MIGYSLLMLIAGYLGE---T------A--YR--------------------------------DNS------VLW-GIISTVGYVGILYEV-----W--M-GSASKLANN--S-NDPHL-K-S-A-F-R-AL-GWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-Cyclobacteriaceae]_EU915924 [II-CFB-Cyclobacteriaceae] clone_xd101_EU915924 gi|229358730|gb|EU915924| Uncultured bacterium clone xd101 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone xd101 putative proteorhodopsin gene, partial cds. EU915924 [[proteorhodopsin super-cluster II/CFB-like cluster/Cyclobacteriaceae-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Cyclobacteriaceae-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTTGCCGCTACTGCATTCTTCTTTTTTGAGCGTCAACAAGTGGAAGGCAAATGGAAAACCTCCCTCCTGATTGCTGGCCTGATTACCATGATTGCATCTGTGCACTACTATTACATGCGCGATGTATGGATGACAACCGGACAATCGCCCACTCAATTCCGCTACATTGACTGGATCTTGACTGTTCCGCTCATGTGCGTGGAATTTTATTTAATCCTGAAGGCATTCGGTGCAAAAATCGAATTGCTTTGGAAAATGATTGGTTATTCTTTGTTGATGCTGATCGCAGGTTACCTTGGAGAGACTGCCTACCGCGATAACAGTGTGTTGTGGGGTATCATCTCTACAGTTGGTTACGTAGGAATTCTGTACGAAGTATGGATGGGCTCTGCGAGCAAACTGGCAAACAACTCCAATGACCCGCACCTGAAGTCTGCTTTCCGCGCCTTGGGTTGGTTTGTTTTGGTTGGTTGGGCTATCTAT MLAATAFFFFERQQVEGKWKTSLLIAGLITMIASVHYYYMRDVWMTTGQSPTQFRYIDWILTVPLMCVEFYLILKAFGAKIELLWKMIGYSLLMLIAGYLGETAYRDNSVLWGIISTVGYVGILYEVWMGSASKLANNSNDPHLKSAFRALGWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACTGCATTCTTCTTTTTTGAGCGTCAACAAGTGGAAGGCAAATGGAAAACCTCCCTCCTGATTGCTGGCCTGATTACCATGATTGCATCTGTGCACTACTATTACATGCGCGATGTATGGATG---------------------------------------------------ACAACCGGACAATCGCCCACTCAATTCCGCTACATTGACTGG------------------------ATCTTGACTGTTCCGCTCATGTGCGTGGAATTTTATTTAATCCTGAAGGCA---------TTC------GGTGCAAAAATC---GAATTG------------------------------------CTTTGGAAA---ATGATTGGTTATTCTTTGTTGATGCTGATCGCAGGTTACCTTGGAGAG---------ACT------------------GCC------TACCGC------------------------------------------------------------------------------------------------GATAACAGT------------------GTGTTGTGG---GGTATCATCTCTACAGTTGGTTACGTAGGAATTCTGTACGAAGTA---------------TGG------ATG---GGCTCTGCGAGCAAACTGGCAAACAAC------TCC---AATGACCCGCACCTG---AAG---TCT---GCT---TTC---CGC---GCCTTG---GGTTGGTTTGTTTTGGTT---------------------------------------------------------------GGTTGG---------GCTATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFFERQQVEGKWKTSLLIAGLITMIASVHYYYMRDVWM-----------------TTGQSPTQFRYIDW--------ILTVPLMCVEFYLILKA---F--GAKI-EL------------LWK-MIGYSLLMLIAGYLGE---T------A--YR--------------------------------DNS------VLW-GIISTVGYVGILYEV-----W--M-GSASKLANN--S-NDPHL-K-S-A-F-R-AL-GWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-Cyclobacteriaceae]_EU915931 [II-CFB-Cyclobacteriaceae] clone_xd114_EU915931 gi|229358744|gb|EU915931| Uncultured bacterium clone xd114 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone xd114 putative proteorhodopsin gene, partial cds. EU915931 [[proteorhodopsin super-cluster II/CFB-like cluster/Cyclobacteriaceae-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Cyclobacteriaceae-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTCGCCGCTACTGTCTTCTTCTTTTTTGAGCGTCAACAAGTAGAAGGCAAATGGAAAACCTCCCTCCTGATTGCTGGCCTGATTACCATGATTGCATCTGTGCACTACTATTACATGCGCGATGTATGGATGACAACCGGACAATCGCCCACTCAATTCCGCTACATTGACTGGATCTTGACTGTTCCGCTCATGTGCGTGGAATTTTATTTAATCCTGAAGGCATTCGGTGCAAAAATCGAATTGCTTTGGAAAATGATTGGTTATTCTTTGTTGATGCTGATCGCAGGTTACCTTGGAGAGACTGCCTACCGCGATAACAGTGTGTTGTGGGGTATCATCTCTACAGTTGGTTACGTAGGAATTCTGTACGAAGTATGGATGGGCTCTGCGAGCAAACTGGCAAACAACTCCAATGACCCGCACCTGAAGTCTGCTTTCCGCGCCTTGGGTTGGTTTGTTTTGGTTGGTTGGGCCATCTAC MVAATVFFFFERQQVEGKWKTSLLIAGLITMIASVHYYYMRDVWMTTGQSPTQFRYIDWILTVPLMCVEFYLILKAFGAKIELLWKMIGYSLLMLIAGYLGETAYRDNSVLWGIISTVGYVGILYEVWMGSASKLANNSNDPHLKSAFRALGWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCCGCTACTGTCTTCTTCTTTTTTGAGCGTCAACAAGTAGAAGGCAAATGGAAAACCTCCCTCCTGATTGCTGGCCTGATTACCATGATTGCATCTGTGCACTACTATTACATGCGCGATGTATGGATG---------------------------------------------------ACAACCGGACAATCGCCCACTCAATTCCGCTACATTGACTGG------------------------ATCTTGACTGTTCCGCTCATGTGCGTGGAATTTTATTTAATCCTGAAGGCA---------TTC------GGTGCAAAAATC---GAATTG------------------------------------CTTTGGAAA---ATGATTGGTTATTCTTTGTTGATGCTGATCGCAGGTTACCTTGGAGAG---------ACT------------------GCC------TACCGC------------------------------------------------------------------------------------------------GATAACAGT------------------GTGTTGTGG---GGTATCATCTCTACAGTTGGTTACGTAGGAATTCTGTACGAAGTA---------------TGG------ATG---GGCTCTGCGAGCAAACTGGCAAACAAC------TCC---AATGACCCGCACCTG---AAG---TCT---GCT---TTC---CGC---GCCTTG---GGTTGGTTTGTTTTGGTT---------------------------------------------------------------GGTTGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFFERQQVEGKWKTSLLIAGLITMIASVHYYYMRDVWM-----------------TTGQSPTQFRYIDW--------ILTVPLMCVEFYLILKA---F--GAKI-EL------------LWK-MIGYSLLMLIAGYLGE---T------A--YR--------------------------------DNS------VLW-GIISTVGYVGILYEV-----W--M-GSASKLANN--S-NDPHL-K-S-A-F-R-AL-GWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-Cyclobacteriaceae]_EU915927 [II-CFB-Cyclobacteriaceae] clone_xd105_EU915927 gi|229358736|gb|EU915927| Uncultured bacterium clone xd105 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone xd105 putative proteorhodopsin gene, partial cds. EU915927 [[proteorhodopsin super-cluster II/CFB-like cluster/Cyclobacteriaceae-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Cyclobacteriaceae-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGCATTCTTCTTTTTTGAGCGTCAACAAGTAGAAGGCAAATGGAAAACCTCCCTCCTGATTGCTGGCCTGATTACCATGATTGCATCTGTGCACTACTATTACATGCGCGATGTATGGATGACAACCGGACAATCGCCCACTCAATTCCGCTACATTGACTGGATCTTGACTGTTCCGCTCATGTGCGTGGAATTTTATTTAATCCTGAAGGCATTCGGTGCAAAAATCGAATTGCTTTGGAAAATGATTGGTTATTCTTTGTTGATGCTGATCGCAGGTTACCTTGGAGAGACTGCCTACCGCGATAACAGTGTGTTGTGGGGTATCATCTCTACAGTTGGTTACGTAGGAATTCTGTACGAAGTATGGATGGGCTCTGCGAGCAAACTGGCAAACAACTCCAATGACCCGCACCTGAAGTCTGCTTTCCGCGCCTTGGGTTGGTTTGTTTTGGTTGGATGGGCCATCTAC MVAATAFFFFERQQVEGKWKTSLLIAGLITMIASVHYYYMRDVWMTTGQSPTQFRYIDWILTVPLMCVEFYLILKAFGAKIELLWKMIGYSLLMLIAGYLGETAYRDNSVLWGIISTVGYVGILYEVWMGSASKLANNSNDPHLKSAFRALGWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCATTCTTCTTTTTTGAGCGTCAACAAGTAGAAGGCAAATGGAAAACCTCCCTCCTGATTGCTGGCCTGATTACCATGATTGCATCTGTGCACTACTATTACATGCGCGATGTATGGATG---------------------------------------------------ACAACCGGACAATCGCCCACTCAATTCCGCTACATTGACTGG------------------------ATCTTGACTGTTCCGCTCATGTGCGTGGAATTTTATTTAATCCTGAAGGCA---------TTC------GGTGCAAAAATC---GAATTG------------------------------------CTTTGGAAA---ATGATTGGTTATTCTTTGTTGATGCTGATCGCAGGTTACCTTGGAGAG---------ACT------------------GCC------TACCGC------------------------------------------------------------------------------------------------GATAACAGT------------------GTGTTGTGG---GGTATCATCTCTACAGTTGGTTACGTAGGAATTCTGTACGAAGTA---------------TGG------ATG---GGCTCTGCGAGCAAACTGGCAAACAAC------TCC---AATGACCCGCACCTG---AAG---TCT---GCT---TTC---CGC---GCCTTG---GGTTGGTTTGTTTTGGTT---------------------------------------------------------------GGATGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFFERQQVEGKWKTSLLIAGLITMIASVHYYYMRDVWM-----------------TTGQSPTQFRYIDW--------ILTVPLMCVEFYLILKA---F--GAKI-EL------------LWK-MIGYSLLMLIAGYLGE---T------A--YR--------------------------------DNS------VLW-GIISTVGYVGILYEV-----W--M-GSASKLANN--S-NDPHL-K-S-A-F-R-AL-GWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-Cyclobacteriaceae]_EU915925 [II-CFB-Cyclobacteriaceae] clone_xd103_EU915925 gi|229358732|gb|EU915925| Uncultured bacterium clone xd103 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone xd103 putative proteorhodopsin gene, partial cds. EU915925 [[proteorhodopsin super-cluster II/CFB-like cluster/Cyclobacteriaceae-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Cyclobacteriaceae-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTAGCCGCTACTGTGTTCTTCTTTTTTGAGCGTCAACAAGTAGAAGGCAAATGGAAAACCTCCCTCCTGATTGCTGGCCTGATTACCATGATTGCATCTGTGCACTACTATTACATGCGCGATGTATGGATGACAACCGGACAATCGCCCACTCAATTCCGCTACATTGACTGGATCTTGACTGTTCCGCTCATGTGCGTGGAATTTTATTTAATCCTGAAGGCATTCGGTGCAAAAATCGAATTGCTTTGGAAAATGATTGGTTATTCTTTGTTGATGCTGATCGCAGGTTACCTTGGAGAGACTGCCTACCGCGATAACAGTGTGTTGTGGGGTATCATCTCTACAGTTGGTTACGTAGGAATTCTGTACGAAGTATGGATGGGCTCTGCGAGCAAACTGGCAAACAACTCCAATGACCCGCACCTGAAGTCTGCTTTCCGCGCCTTGGGTTGGTTTGTTTTGGTTGGATGGGCTATCTAC MVAATVFFFFERQQVEGKWKTSLLIAGLITMIASVHYYYMRDVWMTTGQSPTQFRYIDWILTVPLMCVEFYLILKAFGAKIELLWKMIGYSLLMLIAGYLGETAYRDNSVLWGIISTVGYVGILYEVWMGSASKLANNSNDPHLKSAFRALGWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTGTTCTTCTTTTTTGAGCGTCAACAAGTAGAAGGCAAATGGAAAACCTCCCTCCTGATTGCTGGCCTGATTACCATGATTGCATCTGTGCACTACTATTACATGCGCGATGTATGGATG---------------------------------------------------ACAACCGGACAATCGCCCACTCAATTCCGCTACATTGACTGG------------------------ATCTTGACTGTTCCGCTCATGTGCGTGGAATTTTATTTAATCCTGAAGGCA---------TTC------GGTGCAAAAATC---GAATTG------------------------------------CTTTGGAAA---ATGATTGGTTATTCTTTGTTGATGCTGATCGCAGGTTACCTTGGAGAG---------ACT------------------GCC------TACCGC------------------------------------------------------------------------------------------------GATAACAGT------------------GTGTTGTGG---GGTATCATCTCTACAGTTGGTTACGTAGGAATTCTGTACGAAGTA---------------TGG------ATG---GGCTCTGCGAGCAAACTGGCAAACAAC------TCC---AATGACCCGCACCTG---AAG---TCT---GCT---TTC---CGC---GCCTTG---GGTTGGTTTGTTTTGGTT---------------------------------------------------------------GGATGG---------GCTATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFFERQQVEGKWKTSLLIAGLITMIASVHYYYMRDVWM-----------------TTGQSPTQFRYIDW--------ILTVPLMCVEFYLILKA---F--GAKI-EL------------LWK-MIGYSLLMLIAGYLGE---T------A--YR--------------------------------DNS------VLW-GIISTVGYVGILYEV-----W--M-GSASKLANN--S-NDPHL-K-S-A-F-R-AL-GWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-Cyclobacteriaceae]_EU224282 [II-CFB-Cyclobacteriaceae] clone_1812214_EU224282 gi|164698736|gb|EU224282| Uncultured bacterium clone 1812214 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 1812214 putative proteorhodopsin gene, partial cds. EU224282 [[proteorhodopsin super-cluster II/CFB-like cluster/Cyclobacteriaceae-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Cyclobacteriaceae-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2008 #na surface water sample Indian Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGCTAGCCGCTACTGCGTTCTTCTTTGTACAGATGACCCGCGTCGACGGGAAGTGGAAAGACTCCATGCTCGTTTCCGGTTTGATTACGGGTATTGCCGCAGTACACTATTTCTACATGCGCAGTTTCTGGGCAGAGAACCAGGTGTCTCCTACCGAGTTCCGGTACATTGACTGGATTCTTACGGTACCCCTGATGTGCGTGGAATTCTATTTGATCCTCAAAGCCTTTGGGGCTAAGCAGGGTCTGCTGTGGCGCATGATTTTCTGGTCCTTGTTCATGCTGGTAACCGGTTATCTGGGAGAAACTGTCTTCCGCGAGGCCTCTCCTCTGTGGGGTGCTATCTCTACCATTGGATACGCAGCAATCTTCTATGATGTGTGGTTCGGTCCTGCCAAGAAACTGGCATCGAACTCTAACGATCCTACCCTGCAAAAGGCTTTCAAGTCGCTGGGTTGGTTCATCCTGGTAGGCTGGGCAATATATCCA MLAATAFFFVQMTRVDGKWKDSMLVSGLITGIAAVHYFYMRSFWAENQVSPTEFRYIDWILTVPLMCVEFYLILKAFGAKQGLLWRMIFWSLFMLVTGYLGETVFREASPLWGAISTIGYAAIFYDVWFGPAKKLASNSNDPTLQKAFKSLGWFILVGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTAGCCGCTACTGCGTTCTTCTTTGTACAGATGACCCGCGTCGACGGGAAGTGGAAAGACTCCATGCTCGTTTCCGGTTTGATTACGGGTATTGCCGCAGTACACTATTTCTACATGCGCAGTTTCTGGGCA---------------------------------------------------GAGAACCAGGTGTCTCCTACCGAGTTCCGGTACATTGACTGG------------------------ATTCTTACGGTACCCCTGATGTGCGTGGAATTCTATTTGATCCTCAAAGCC---------TTT------GGGGCTAAGCAG---GGTCTG------------------------------------CTGTGGCGC---ATGATTTTCTGGTCCTTGTTCATGCTGGTAACCGGTTATCTGGGAGAA---------ACT------------------GTC------TTCCGC------------------------------------------------------------------------------------------------GAGGCCTCT------------------CCTCTGTGG---GGTGCTATCTCTACCATTGGATACGCAGCAATCTTCTATGATGTG---------------TGG------TTC---GGTCCTGCCAAGAAACTGGCATCGAAC------TCT---AACGATCCTACCCTG---CAA---AAG---GCT---TTC---AAG---TCGCTG---GGTTGGTTCATCCTGGTA---------------------------------------------------------------GGCTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFVQMTRVDGKWKDSMLVSGLITGIAAVHYFYMRSFWA-----------------ENQVSPTEFRYIDW--------ILTVPLMCVEFYLILKA---F--GAKQ-GL------------LWR-MIFWSLFMLVTGYLGE---T------V--FR--------------------------------EAS------PLW-GAISTIGYAAIFYDV-----W--F-GPAKKLASN--S-NDPTL-Q-K-A-F-K-SL-GWFILV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-CFB-Cyclobacteriaceae]_EU224286 [II-CFB-Cyclobacteriaceae] clone_1812218_EU224286 gi|164698744|gb|EU224286| Uncultured bacterium clone 1812218 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 1812218 putative proteorhodopsin gene, partial cds. EU224286 [[proteorhodopsin super-cluster II/CFB-like cluster/Cyclobacteriaceae-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Cyclobacteriaceae-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2008 #na surface water sample Indian Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGCTAGCCGCTACTGCGTTCTTCTTTGTACAGATGACCCGCGTCGACGGGAAGTGGAAAGACTCCATGCTCGTTTCCGGTTTGATTACGGGTATTGCCGCAGTACACTATTTCTACATGCGCAGTTTCTGGGCAGAGAACCAGGTGTCTCCTACCGAGTTCCGGTACATTGACTGGATTCTTACGGTACCCCTGATGTGCGTGGAATTCTATTTGATCCTCAAAGCCTTTGGGGCTAAGCAGGGTCTGCTGTGGCGCATGATTTTCTGGTCCTTGTTCATGCTGGTAACCGGTTATCTGGGAGAAACTGTCTTCCGCGAGGCCTCTCCTCTGTGGGGTGCTATCTCTACCATTGGATACGCAGCAATCTTCTATGATGTGTGGTTCGGTCCTGCCAAGAAACTGGCATCGAACTCTAACGATCCTACCCTGCAAAAGGCTTTCAAGTCGCTGGGTTGGTTCATCCTGGTAGGCTGGGCAATATATCCA MLAATAFFFVQMTRVDGKWKDSMLVSGLITGIAAVHYFYMRSFWAENQVSPTEFRYIDWILTVPLMCVEFYLILKAFGAKQGLLWRMIFWSLFMLVTGYLGETVFREASPLWGAISTIGYAAIFYDVWFGPAKKLASNSNDPTLQKAFKSLGWFILVGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTAGCCGCTACTGCGTTCTTCTTTGTACAGATGACCCGCGTCGACGGGAAGTGGAAAGACTCCATGCTCGTTTCCGGTTTGATTACGGGTATTGCCGCAGTACACTATTTCTACATGCGCAGTTTCTGGGCA---------------------------------------------------GAGAACCAGGTGTCTCCTACCGAGTTCCGGTACATTGACTGG------------------------ATTCTTACGGTACCCCTGATGTGCGTGGAATTCTATTTGATCCTCAAAGCC---------TTT------GGGGCTAAGCAG---GGTCTG------------------------------------CTGTGGCGC---ATGATTTTCTGGTCCTTGTTCATGCTGGTAACCGGTTATCTGGGAGAA---------ACT------------------GTC------TTCCGC------------------------------------------------------------------------------------------------GAGGCCTCT------------------CCTCTGTGG---GGTGCTATCTCTACCATTGGATACGCAGCAATCTTCTATGATGTG---------------TGG------TTC---GGTCCTGCCAAGAAACTGGCATCGAAC------TCT---AACGATCCTACCCTG---CAA---AAG---GCT---TTC---AAG---TCGCTG---GGTTGGTTCATCCTGGTA---------------------------------------------------------------GGCTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFVQMTRVDGKWKDSMLVSGLITGIAAVHYFYMRSFWA-----------------ENQVSPTEFRYIDW--------ILTVPLMCVEFYLILKA---F--GAKQ-GL------------LWR-MIFWSLFMLVTGYLGE---T------V--FR--------------------------------EAS------PLW-GAISTIGYAAIFYDV-----W--F-GPAKKLASN--S-NDPTL-Q-K-A-F-K-SL-GWFILV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-CFB-Cyclobacteriaceae]_EU224283 [II-CFB-Cyclobacteriaceae] clone_1812215_EU224283 gi|164698738|gb|EU224283| Uncultured bacterium clone 1812215 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 1812215 putative proteorhodopsin gene, partial cds. EU224283 [[proteorhodopsin super-cluster II/CFB-like cluster/Cyclobacteriaceae-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Cyclobacteriaceae-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2008 #na surface water sample Indian Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGCTAGCCGCTACTGCGTTCTTCTTTGTACAGATGACCCGCGTCGACGGGAAGTGGAAAGACTCCATGCTCGTTTCCGGTTTGATTACGGGTATTGCCGCAGTACACTATTTCTACATGCGCAGTTTCTGGGCAGAGAACCAGGTGTCTCCTACCGAGTTCCGGTACATTGACTGGATTCTTACGGTACCCCTGATGTGCGTGGAATTCTATTTGATCCTCAAAGCCTTTGGGGCTAAGCAGGGTCTGCTGTGGCGCATGATTTTCTGGTCCTTGTTCATGCTGGTAACCGGTTATCTGGGAGAAACTGTCTTCCGCGAGGCCTCTCCTCTGTGGGGTGCTATCTCTACCATTGGATACGCAGCAATCTTCTATGATGTGTGGTTCGGTCCTGCCAAGAAACTGGCATCGAACTCTAACGATCCTACCCTGCAAAAGGCTTTCAAGTCGCTGGGTTGGTTCATCCTGGTAGGCTGGGCAATATATCCA MLAATAFFFVQMTRVDGKWKDSMLVSGLITGIAAVHYFYMRSFWAENQVSPTEFRYIDWILTVPLMCVEFYLILKAFGAKQGLLWRMIFWSLFMLVTGYLGETVFREASPLWGAISTIGYAAIFYDVWFGPAKKLASNSNDPTLQKAFKSLGWFILVGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTAGCCGCTACTGCGTTCTTCTTTGTACAGATGACCCGCGTCGACGGGAAGTGGAAAGACTCCATGCTCGTTTCCGGTTTGATTACGGGTATTGCCGCAGTACACTATTTCTACATGCGCAGTTTCTGGGCA---------------------------------------------------GAGAACCAGGTGTCTCCTACCGAGTTCCGGTACATTGACTGG------------------------ATTCTTACGGTACCCCTGATGTGCGTGGAATTCTATTTGATCCTCAAAGCC---------TTT------GGGGCTAAGCAG---GGTCTG------------------------------------CTGTGGCGC---ATGATTTTCTGGTCCTTGTTCATGCTGGTAACCGGTTATCTGGGAGAA---------ACT------------------GTC------TTCCGC------------------------------------------------------------------------------------------------GAGGCCTCT------------------CCTCTGTGG---GGTGCTATCTCTACCATTGGATACGCAGCAATCTTCTATGATGTG---------------TGG------TTC---GGTCCTGCCAAGAAACTGGCATCGAAC------TCT---AACGATCCTACCCTG---CAA---AAG---GCT---TTC---AAG---TCGCTG---GGTTGGTTCATCCTGGTA---------------------------------------------------------------GGCTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFVQMTRVDGKWKDSMLVSGLITGIAAVHYFYMRSFWA-----------------ENQVSPTEFRYIDW--------ILTVPLMCVEFYLILKA---F--GAKQ-GL------------LWR-MIFWSLFMLVTGYLGE---T------V--FR--------------------------------EAS------PLW-GAISTIGYAAIFYDV-----W--F-GPAKKLASN--S-NDPTL-Q-K-A-F-K-SL-GWFILV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-CFB-Cyclobacteriaceae]_EU224290 [II-CFB-Cyclobacteriaceae] clone_1812223_EU224290 gi|164698752|gb|EU224290| Uncultured bacterium clone 1812223 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 1812223 putative proteorhodopsin gene, partial cds. EU224290 [[proteorhodopsin super-cluster II/CFB-like cluster/Cyclobacteriaceae-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Cyclobacteriaceae-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2008 #na surface water sample Indian Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na ATGCTAGCCGCTACTGCGTTCTTCTTTGTACAGATGACCCGCGTCGACGGGAAGTGGAAAGACTCCATGCTCGTTTCCGGTTTGATTACGGGTATTGCCGCAGTACACTATTTCTACATGCGCAGTTTCTGGGCAGAGAACCAGGTGTCTCCTACCGAGTTCCGGTACATTGACTGGATTCTTACGGTACCCCTGATGTGCGTGGAATTCTATTTGATCCTCAAAGCCTTTGGGGCTAAGCAGGGTCTGCTGTGGCGCATGATTTTCTGGTCCTTGTTCATGCTGGTAACCGGTTATCTGGGAGAAACTGTCTTCCGCGAGGCCTCTCCTCTGTGGGGTGCTATCTCTACCATTGGATACGCAGCAATCTTCTATGATGTGTGGTTCGGTCCTGCCAAGAAACTGGCATCGAACTCTAACGATCCTACCCTGCAAAAGGCTTTCAAGTCGCTGGGTTGGTTCATCCTGGTAGGCTGGGCAATATATCCA MLAATAFFFVQMTRVDGKWKDSMLVSGLITGIAAVHYFYMRSFWAENQVSPTEFRYIDWILTVPLMCVEFYLILKAFGAKQGLLWRMIFWSLFMLVTGYLGETVFREASPLWGAISTIGYAAIFYDVWFGPAKKLASNSNDPTLQKAFKSLGWFILVGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTAGCCGCTACTGCGTTCTTCTTTGTACAGATGACCCGCGTCGACGGGAAGTGGAAAGACTCCATGCTCGTTTCCGGTTTGATTACGGGTATTGCCGCAGTACACTATTTCTACATGCGCAGTTTCTGGGCA---------------------------------------------------GAGAACCAGGTGTCTCCTACCGAGTTCCGGTACATTGACTGG------------------------ATTCTTACGGTACCCCTGATGTGCGTGGAATTCTATTTGATCCTCAAAGCC---------TTT------GGGGCTAAGCAG---GGTCTG------------------------------------CTGTGGCGC---ATGATTTTCTGGTCCTTGTTCATGCTGGTAACCGGTTATCTGGGAGAA---------ACT------------------GTC------TTCCGC------------------------------------------------------------------------------------------------GAGGCCTCT------------------CCTCTGTGG---GGTGCTATCTCTACCATTGGATACGCAGCAATCTTCTATGATGTG---------------TGG------TTC---GGTCCTGCCAAGAAACTGGCATCGAAC------TCT---AACGATCCTACCCTG---CAA---AAG---GCT---TTC---AAG---TCGCTG---GGTTGGTTCATCCTGGTA---------------------------------------------------------------GGCTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFVQMTRVDGKWKDSMLVSGLITGIAAVHYFYMRSFWA-----------------ENQVSPTEFRYIDW--------ILTVPLMCVEFYLILKA---F--GAKQ-GL------------LWR-MIFWSLFMLVTGYLGE---T------V--FR--------------------------------EAS------PLW-GAISTIGYAAIFYDV-----W--F-GPAKKLASN--S-NDPTL-Q-K-A-F-K-SL-GWFILV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-CFB-Cyclobacteriaceae]_JX863330 [II-CFB-Cyclobacteriaceae] MALINA_OTU55_334_M_env_samples_JX863330 gi|425477610|gb|JX863330| Uncultured bacterium clone MALINA OTU55 334 M putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU55 334 M putative proteorhodopsin mRNA, partial cds JX863330 [[proteorhodopsin super-cluster II/CFB-like cluster/Cyclobacteriaceae-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Cyclobacteriaceae-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 02Aug2009 3m_depth Arctic Ocean marine 69.61 -138.23 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGACGCTAACTGTGCCTTTGATGTGTGTTGAATTCTACTTGATCCTGAAAGCTTTTGGCGCGAAGATAGGTCTAATGTGGAAATTAATCGCCTATTCTGTATTTATGCTTGTTACAGGATATTTGGGAGAGACAGTTTTTAGAGATAACAGTGCTATTTGGGGAGCAATCTCTGCATTAGGTTATGCTGGAATCGTCTATGAAATATGGCTAGGAAGTGCGAAGAAATTGGCGCAAAGTCCGAATGATCCTATTTTACAAAAAGCATTCAGCACATTAGGCTGGTTTGTGCTTGTA WTLTVPLMCVEFYLILKAFGAKIGLMWKLIAYSVFMLVTGYLGETVFRDNSAIWGAISALGYAGIVYEIWLGSAKKLAQSPNDPILQKAFSTLGWFVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------ACGCTAACTGTGCCTTTGATGTGTGTTGAATTCTACTTGATCCTGAAAGCT---------TTT------GGCGCGAAGATA---GGTCTA------------------------------------ATGTGGAAA---TTAATCGCCTATTCTGTATTTATGCTTGTTACAGGATATTTGGGAGAG---------ACA------------------GTT------TTTAGA------------------------------------------------------------------------------------------------GATAACAGT------------------GCTATTTGG---GGAGCAATCTCTGCATTAGGTTATGCTGGAATCGTCTATGAAATA---------------TGG------CTA---GGAAGTGCGAAGAAATTGGCGCAAAGT------CCG---AATGATCCTATTTTA---CAA---AAA---GCA---TTC---AGC---ACATTA---GGCTGGTTTGTGCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------TLTVPLMCVEFYLILKA---F--GAKI-GL------------MWK-LIAYSVFMLVTGYLGE---T------V--FR--------------------------------DNS------AIW-GAISALGYAGIVYEI-----W--L-GSAKKLAQS--P-NDPIL-Q-K-A-F-S-TL-GWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Cyclobacteriaceae]_EU915891 [II-CFB-Cyclobacteriaceae] US80225_env_samples_EU915891 gi|229358664|gb|EU915891| Uncultured microorganism clone US80225 putative proteorhodopsin gene, partial cds Uncultured microorganism clone US80225 putative proteorhodopsin gene, partial cds EU915891 [[proteorhodopsin super-cluster II/CFB-like cluster/Cyclobacteriaceae-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Cyclobacteriaceae-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_surface_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTGGCCGCTACTGTATTCTTCTTTCTCGAGATGGGGAATGTCCAAGGTAAATGGATAACGTCTATGTTAATTTCTGGATTGATTACCTTCATTGCCGCAGTGCATTACTTTTACATGAGAGATTTTTGGGCAGAGACAGGTACTTCTCCTACAGAATTTAGATATATTGATTGGATATTGACGGTACCCTTAATGTGTGTTGAATTTTATCTTATTTTAAAGGCCTTTGGAGCCAAGATGGATCTTTTGTGGAAAATGATTGCTTATTCGCTTTGGATGCTTATTTTCGGATATCTAGGAGAGACGGTTTATAGAGATACTAGTGCGATCTGGGGTGTTATATCGACCTTAGGTTACGTGGGTATTTTCTATGAAGTATGGTTTGGATCTGCAAAAAAGCTTTCACAAGGATCAAATGATCCCCATTTGCAGAAAGCATTTAACACCTTAGCATGGTTTATATTAGTCGGGTGGGCCATCTAC MLAATVFFFLEMGNVQGKWITSMLISGLITFIAAVHYFYMRDFWAETGTSPTEFRYIDWILTVPLMCVEFYLILKAFGAKMDLLWKMIAYSLWMLIFGYLGETVYRDTSAIWGVISTLGYVGIFYEVWFGSAKKLSQGSNDPHLQKAFNTLAWFILVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGTATTCTTCTTTCTCGAGATGGGGAATGTCCAAGGTAAATGGATAACGTCTATGTTAATTTCTGGATTGATTACCTTCATTGCCGCAGTGCATTACTTTTACATGAGAGATTTTTGGGCA---------------------------------------------------GAGACAGGTACTTCTCCTACAGAATTTAGATATATTGATTGG------------------------ATATTGACGGTACCCTTAATGTGTGTTGAATTTTATCTTATTTTAAAGGCC---------TTT------GGAGCCAAGATG---GATCTT------------------------------------TTGTGGAAA---ATGATTGCTTATTCGCTTTGGATGCTTATTTTCGGATATCTAGGAGAG---------ACG------------------GTT------TATAGA------------------------------------------------------------------------------------------------GATACTAGT------------------GCGATCTGG---GGTGTTATATCGACCTTAGGTTACGTGGGTATTTTCTATGAAGTA---------------TGG------TTT---GGATCTGCAAAAAAGCTTTCACAAGGA------TCA---AATGATCCCCATTTG---CAG---AAA---GCA---TTT---AAC---ACCTTA---GCATGGTTTATATTAGTC---------------------------------------------------------------GGGTGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFLEMGNVQGKWITSMLISGLITFIAAVHYFYMRDFWA-----------------ETGTSPTEFRYIDW--------ILTVPLMCVEFYLILKA---F--GAKM-DL------------LWK-MIAYSLWMLIFGYLGE---T------V--YR--------------------------------DTS------AIW-GVISTLGYVGIFYEV-----W--F-GSAKKLSQG--S-NDPHL-Q-K-A-F-N-TL-AWFILV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-Cyclobacteriaceae]_NZ_AQHR01000114 [II-CFB-Cyclobacteriaceae] 499127961_57956_58708_Cyclobacteriaceae_bacterium_AK24_S14_genome gi|499127961|gb|NZ_AQHR01000114| Cyclobacteriaceae bacterium AK24 S14 contig 17, whole genome shotgun sequence Cyclobacteriaceae bacterium AK24 S14 contig 17, whole genome shotgun sequence NZ_AQHR01000114 [[proteorhodopsin super-cluster II/CFB-like cluster/Cyclobacteriaceae-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Cyclobacteriaceae-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Cytophagia/Cytophagales/Cyclobacteriaceae/unclassified Cyclobacteriaceae] taxon:1288963 genomic_DNA strain 14MAY2013 #na #na other freshwater 19.975768 76.50694 #na #na #na #na #na ATGAACACCCTTTTAACCGCAGATTTGGTTGGTCTTGACAAGATCATCAACAGCGACCCAATTGCTATAACCTTTTTCATTGGGTACATGGCTATGTTTGCATCGGCTGTCTTCTTCTTTGTAGAACGAAGCTCCGTAGATGGGAAGTGGAAAACTTCCTTGCTGGTATCCGGTCTGATTACCGGAATTGCTGCTGTCCACTACTACTACATGCGAGACTTCTACCTGGAGACAGGGCAAAGTCCAACTGCATTTAGGTATGTGGACTGGACACTCACCGTGCCACTGATGTGTGTAGAGTTTTACTTGCTGACGAAGCCCTTTGGAGCCAAGGGCAGCACGTTGTTCAAACTGATCCTGGCCTCACTGGTCATGTTGATTACAGGCTACATCGGGGAAACTTCCGGTATCGAAAACAACATTTTGTGGGGTATTCTCTCCACCTTGGGCTACCTCTACATTGTGTACGAGGTGTTTGCTGGGGATGTGGCCAAACTGGCGAAATCGTCTGATAGTCCGGCATTGGGTCAGGCCATGTTTCTGTTGAAGATTTTCATCACGCTGGGCTGGTCCATATATCCAATCGGCTACATGGTTCTCCCAGGAAACCTGCTCTCGGGTGCATTTGAGGTGAGCAGCATCGATCTCTTCTACAATTTGGCAGATGCCATCAACAAAATCGGCTTTGGCTTGGTGATCTACTCGGTCGCTATCGCAGAAACTGCGAAGGCACGGAAAGCTGTAGTTGCC MNTLLTADLVGLDKIINSDPIAITFFIGYMAMFASAVFFFVERSSVDGKWKTSLLVSGLITGIAAVHYYYMRDFYLETGQSPTAFRYVDWTLTVPLMCVEFYLLTKPFGAKGSTLFKLILASLVMLITGYIGETSGIENNILWGILSTLGYLYIVYEVFAGDVAKLAKSSDSPALGQAMFLLKIFITLGWSIYPIGYMVLPGNLLSGAFEVSSIDLFYNLADAINKIGFGLVIYSVAIAETAKARKAVVA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAACACCCTTTTAACCGCAGATTTGGTTGGTCTTGACAAGATCATCAACAGCGACCCAATTGCTATAACCTTTTTCATTGGGTACATGGCTATGTTTGCATCGGCTGTCTTCTTCTTTGTAGAACGAAGCTCCGTAGATGGGAAGTGGAAAACTTCCTTGCTGGTATCCGGTCTGATTACCGGAATTGCTGCTGTCCACTACTACTACATGCGAGACTTCTACCTG---------------------------------------------------GAGACAGGGCAAAGTCCAACTGCATTTAGGTATGTGGACTGG------------------------ACACTCACCGTGCCACTGATGTGTGTAGAGTTTTACTTGCTGACGAAGCCC---------TTT------GGAGCCAAGGGC---AGCACG------------------------------------TTGTTCAAA---CTGATCCTGGCCTCACTGGTCATGTTGATTACAGGCTACATCGGGGAA---------ACT------------------TCC------GGTATC------------------------------------------------------------------------------------------------GAAAACAAC------------------ATTTTGTGG---GGTATTCTCTCCACCTTGGGCTACCTCTACATTGTGTACGAGGTG---------------TTT------GCT---GGGGATGTGGCCAAACTGGCGAAATCG------TCT---GATAGTCCGGCATTG---GGT---CAG---GCC---ATG---TTT---CTGTTG---AAGATTTTCATCACGCTG---------------------------------------------------------------GGCTGG---------TCCATATATCCAATCGGCTACATGGTTCTCCCAGGAAAC---CTGCTC---------TCG---GGTGCATTTGAGGTGAGCAGC---------------------ATCGATCTCTTCTACAATTTGGCAGATGCCATCAACAAAATCGGCTTTGGCTTGGTGATCTACTCGGTCGCTATC---GCAGAAACTGCGAAGGCACGGAAAGCT------GTAGTTGCC--------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------MNTLLTADLVGLDKIINSDPIAITFFIGYMAMFASAVFFFVERSSVDGKWKTSLLVSGLITGIAAVHYYYMRDFYL-----------------ETGQSPTAFRYVDW--------TLTVPLMCVEFYLLTKP---F--GAKG-ST------------LFK-LILASLVMLITGYIGE---T------S--GI--------------------------------ENN------ILW-GILSTLGYLYIVYEV-----F--A-GDVAKLAKS--S-DSPAL-G-Q-A-M-F-LL-KIFITL---------------------GW---SIYPIGYMVLPGN-LL---S-GAFEVSS-------IDLFYNLADAINKIGFGLVIYSVAI-AETAKARKA--VVA--------------------------- [II-CFB-Cyclobacteriaceae]_AMGM01000039 [II-CFB-Cyclobacteriaceae] Cecembia_lonarensis_LW9_contig000039_WGS_AMGM01000039 gi|405553662|gb|AMGM01000039| Cecembia lonarensis LW9 contig000039, whole genome shotgun sequence Cecembia lonarensis LW9 contig000039, whole genome shotgun sequence AMGM01000039 [[proteorhodopsin super-cluster II/CFB-like cluster/Cyclobacteriaceae-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Cyclobacteriaceae-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Cytophagia/Cytophagales/Cyclobacteriaceae/Cecembia] taxon:1225176 genomic_DNA strain 18-sept-12 #na surface_water_[4.5_m_depth] other freshwater 19.975768 76.50694 Draft Genome Sequence of Cecembia lonarensis Strain LW9T, Isolated from Lonar Lake, a Haloalkaline Lake in India Shivaji,S., Ara,S., Singh,A. and Pinnaka,A.K. J. Bacteriol. 194 (23), 6631 (2012) 23144386 type strain of Cecembia lonarensis ATGAACACCATTTTAACCGCAGATTTGGTAGGTCTTGATAAGATCATCAATAGCGACCCAATCGCCATTACCTTCTTCATTGGGTACATGGCTATGTTTGCTTCCGCCGTATTCTTTTTCGTAGAAAGAAGTTCAGTGGATGGAAAGTGGAAAACTTCCCTTTTGGTATCCGGTTTGATCACGGGTATTGCTGCAGTACACTACTATTACATGAGGGACTTTTACCTCGAGACTGGCACCAGTCCAACAGCTTTCAGGTATGTGGATTGGACGTTGACTGTACCTTTGATGTGTGTGGAGTTCTATCTATTGACAAAGCCTTTCGGAGCCAAAGGTAGCACCCTATTCAAATTAATCGTTGCCTCTCTATTGATGTTGTTAACTGGTTATATTGGTGAGACTTCCGGAATCGATAGCAACATCTTCTGGGGTGTAGTTTCTACCATCGGTTACTTATACATCGTATATGAAGTGTTTGCAGGAGACGTAGCTAAATTGACTAAAACTTCCAACAGCCCAGAATTGGCCCGTGCCATGTTCTTGTTGAAAATCTTCATCACTTTAGGATGGTCAATCTATCCAATCGGTTACATGGTATTGCCAGGCAACCTGCTATCCGGTGTATTTGAAGTGAGTAGCATAGATTTGTTCTACAACTTGGCTGATGCCATCAATAAAATTGGTTTTGGTTTGGTGATCTATTCTGTAGCCATCGCTGAAACCGCTAAGAGCAGAAAAGCAGTTGCAGCT MNTILTADLVGLDKIINSDPIAITFFIGYMAMFASAVFFFVERSSVDGKWKTSLLVSGLITGIAAVHYYYMRDFYLETGTSPTAFRYVDWTLTVPLMCVEFYLLTKPFGAKGSTLFKLIVASLLMLLTGYIGETSGIDSNIFWGVVSTIGYLYIVYEVFAGDVAKLTKTSNSPELARAMFLLKIFITLGWSIYPIGYMVLPGNLLSGVFEVSSIDLFYNLADAINKIGFGLVIYSVAIAETAKSRKAVAA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAACACCATTTTAACCGCAGATTTGGTAGGTCTTGATAAGATCATCAATAGCGACCCAATCGCCATTACCTTCTTCATTGGGTACATGGCTATGTTTGCTTCCGCCGTATTCTTTTTCGTAGAAAGAAGTTCAGTGGATGGAAAGTGGAAAACTTCCCTTTTGGTATCCGGTTTGATCACGGGTATTGCTGCAGTACACTACTATTACATGAGGGACTTTTACCTC---------------------------------------------------GAGACTGGCACCAGTCCAACAGCTTTCAGGTATGTGGATTGG------------------------ACGTTGACTGTACCTTTGATGTGTGTGGAGTTCTATCTATTGACAAAGCCT---------TTC------GGAGCCAAAGGT---AGCACC------------------------------------CTATTCAAA---TTAATCGTTGCCTCTCTATTGATGTTGTTAACTGGTTATATTGGTGAG---------ACT------------------TCC------GGAATC------------------------------------------------------------------------------------------------GATAGCAAC------------------ATCTTCTGG---GGTGTAGTTTCTACCATCGGTTACTTATACATCGTATATGAAGTG---------------TTT------GCA---GGAGACGTAGCTAAATTGACTAAAACT------TCC---AACAGCCCAGAATTG---GCC---CGT---GCC---ATG---TTC---TTGTTG---AAAATCTTCATCACTTTA---------------------------------------------------------------GGATGG---------TCAATCTATCCAATCGGTTACATGGTATTGCCAGGCAAC---CTGCTA---------TCC---GGTGTATTTGAAGTGAGTAGC---------------------ATAGATTTGTTCTACAACTTGGCTGATGCCATCAATAAAATTGGTTTTGGTTTGGTGATCTATTCTGTAGCCATC---GCTGAAACCGCTAAGAGCAGAAAAGCA------GTTGCAGCT--------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------MNTILTADLVGLDKIINSDPIAITFFIGYMAMFASAVFFFVERSSVDGKWKTSLLVSGLITGIAAVHYYYMRDFYL-----------------ETGTSPTAFRYVDW--------TLTVPLMCVEFYLLTKP---F--GAKG-ST------------LFK-LIVASLLMLLTGYIGE---T------S--GI--------------------------------DSN------IFW-GVVSTIGYLYIVYEV-----F--A-GDVAKLTKT--S-NSPEL-A-R-A-M-F-LL-KIFITL---------------------GW---SIYPIGYMVLPGN-LL---S-GVFEVSS-------IDLFYNLADAINKIGFGLVIYSVAI-AETAKSRKA--VAA--------------------------- [II-CFB-Cyclobacteriaceae]_ALWO02000045 [II-CFB-Cyclobacteriaceae] Indibacter_alkaliphilus_LW1_genome_ALWO02000045 gi|509709288|gb|ALWO02000045| Indibacter alkaliphilus LW1 Indibacter contig 46, whole genome shotgun sequence Indibacter alkaliphilus LW1 Indibacter contig 46, whole genome shotgun sequence ALWO02000045 [[proteorhodopsin super-cluster II/CFB-like cluster/Cyclobacteriaceae-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Cyclobacteriaceae-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Cytophagia/Cytophagales/Cyclobacteriaceae] taxon:1189612 genomic_DNA strain 04-juin-13 #na Lonar_Lake other freshwater 19.975768 76.50694 Draft Genome Sequence of Indibacter alkaliphilus Strain LW1T, Isolated from Lonar Lake, a Haloalkaline Lake in the Buldana District of Maharashtra, India Singh,A., Kumar Jangir,P., Sharma,R., Singh,A., Kumar Pinnaka,A. and Shivaji,S. Genome Announc 1 (4), E0051313 (2013) 23868132 #na ATGAACACCCTCATTGCCGCAGATTTAGTGGGTCTTGACCGTATTGTCAACAGCGACCCTGTAGCCATTACCTTTTTCATAGGGTACATGGCTATGTTTGCTTCCGCAGTTTTCTTCTTTGTGGAAAGAAGTTCTGTGGATGGGAAATGGAAAACCTCTCTTTTAGTATCCGGATTGATAACAGGTATCGCTGCAGTCCATTATTATTACATGAGAGATTTCTACATGATTACGGGCACTAGCCCAACAGCCTTCAGGTATGTAGACTGGACTTTAACAGTTCCATTGATGTGTGTGGAATTTTATTTATTGACCAAGCCTTTTGGAGCCAAAACGGGTACTTTAACCAAATTGATCCTAGCTTCCCTTTTGATGTTGATTACAGGTTATATCGGTGAGACATCCGGTATAGATAATAACATTTTCTGGGGTGTAGCATCCACTATTGGTTACTTGTATATTGTTTATGAAGTATTTGCTGGCGATGTTGCTAGACTTTCTAAGGAATCAAATAGCCCTGAGTTGAAAAGAGCCATGTTTCTATTGAAAATCTTCATCACATTAGGATGGTCAATCTATCCAATAGGATATATGGTATTGCCAGGTAACCTATTGTCAGGTGTTTTTGAAGTATCAAGCATTGACTTGTTCTACAACCTCGCAGATGCGATTAACAAAATTGGATTCGGATTGGTTATTTACTCAGTTGCAATAGCTGAAACCAATAAGATGAGAAAAGTGAAAGCTGCT MNTLIAADLVGLDRIVNSDPVAITFFIGYMAMFASAVFFFVERSSVDGKWKTSLLVSGLITGIAAVHYYYMRDFYMITGTSPTAFRYVDWTLTVPLMCVEFYLLTKPFGAKTGTLTKLILASLLMLITGYIGETSGIDNNIFWGVASTIGYLYIVYEVFAGDVARLSKESNSPELKRAMFLLKIFITLGWSIYPIGYMVLPGNLLSGVFEVSSIDLFYNLADAINKIGFGLVIYSVAIAETNKMRKVKAA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAACACCCTCATTGCCGCAGATTTAGTGGGTCTTGACCGTATTGTCAACAGCGACCCTGTAGCCATTACCTTTTTCATAGGGTACATGGCTATGTTTGCTTCCGCAGTTTTCTTCTTTGTGGAAAGAAGTTCTGTGGATGGGAAATGGAAAACCTCTCTTTTAGTATCCGGATTGATAACAGGTATCGCTGCAGTCCATTATTATTACATGAGAGATTTCTACATG---------------------------------------------------ATTACGGGCACTAGCCCAACAGCCTTCAGGTATGTAGACTGG------------------------ACTTTAACAGTTCCATTGATGTGTGTGGAATTTTATTTATTGACCAAGCCT---------TTT------GGAGCCAAAACG---GGTACT------------------------------------TTAACCAAA---TTGATCCTAGCTTCCCTTTTGATGTTGATTACAGGTTATATCGGTGAG---------ACA------------------TCC------GGTATA------------------------------------------------------------------------------------------------GATAATAAC------------------ATTTTCTGG---GGTGTAGCATCCACTATTGGTTACTTGTATATTGTTTATGAAGTA---------------TTT------GCT---GGCGATGTTGCTAGACTTTCTAAGGAA------TCA---AATAGCCCTGAGTTG---AAA---AGA---GCC---ATG---TTT---CTATTG---AAAATCTTCATCACATTA---------------------------------------------------------------GGATGG---------TCAATCTATCCAATAGGATATATGGTATTGCCAGGTAAC---CTATTG---------TCA---GGTGTTTTTGAAGTATCAAGC---------------------ATTGACTTGTTCTACAACCTCGCAGATGCGATTAACAAAATTGGATTCGGATTGGTTATTTACTCAGTTGCAATA---GCTGAAACCAATAAGATGAGAAAAGTG------AAAGCTGCT--------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------MNTLIAADLVGLDRIVNSDPVAITFFIGYMAMFASAVFFFVERSSVDGKWKTSLLVSGLITGIAAVHYYYMRDFYM-----------------ITGTSPTAFRYVDW--------TLTVPLMCVEFYLLTKP---F--GAKT-GT------------LTK-LILASLLMLITGYIGE---T------S--GI--------------------------------DNN------IFW-GVASTIGYLYIVYEV-----F--A-GDVARLSKE--S-NSPEL-K-R-A-M-F-LL-KIFITL---------------------GW---SIYPIGYMVLPGN-LL---S-GVFEVSS-------IDLFYNLADAINKIGFGLVIYSVAI-AETNKMRKV--KAA--------------------------- [II-CFB-a]_EU683567 [II-CFB-a] W802_env_samples_EU683567 gi|187711607|gb|EU683567| Uncultured bacterium clone W802 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W802 putative proteorhodopsin gene, partial cds EU683567 [[proteorhodopsin super-cluster II/CFB-like cluster/A subcluster]] proteorhodopsin super-cluster II CFB-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_surface_water_[2m] China Sea marine 30.5 125.52 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCTGTATTCTTTTTCCTTTCAATGAATTCTGTTGACGGGAAATGGAAAACCTCGATATTAGTGTCTGGTCTTATTACATTTATTGCAGCCGTTCATTACTATTATATGAGGGATTATTGGGGAGCAACCGGAGAAACTCCTACCTTTTATCGTTATGTGGACTGGATTTTAACTGTTCCGCTAATGTGTGTTGAGTTCTACTTAATTCTAAAACCTTCTGGGGCTACAAAAGGATTAATGTGGAAATTAATTGGTTTATCAACTGTAATGTTAGTTACTGGTTACATTGGTGAA AMMAASVFFFLSMNSVDGKWKTSILVSGLITFIAAVHYYYMRDYWGATGETPTFYRYVDWILTVPLMCVEFYLILKPSGATKGLMWKLIGLSTVMLVTGYIGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCTGTATTCTTTTTCCTTTCAATGAATTCTGTTGACGGGAAATGGAAAACCTCGATATTAGTGTCTGGTCTTATTACATTTATTGCAGCCGTTCATTACTATTATATGAGGGATTATTGGGGA---------------------------------------------------GCAACCGGAGAAACTCCTACCTTTTATCGTTATGTGGACTGG------------------------ATTTTAACTGTTCCGCTAATGTGTGTTGAGTTCTACTTAATTCTAAAACCT---------TCT------GGGGCTACAAAA---GGATTA------------------------------------ATGTGGAAA---TTAATTGGTTTATCAACTGTAATGTTAGTTACTGGTTACATTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLSMNSVDGKWKTSILVSGLITFIAAVHYYYMRDYWG-----------------ATGETPTFYRYVDW--------ILTVPLMCVEFYLILKP---S--GATK-GL------------MWK-LIGLSTVMLVTGYIGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-a]_EU683610 [II-CFB-a] W87013_env_samples_EU683610 gi|187711693|gb|EU683610| Uncultured bacterium clone W87013 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W87013 putative proteorhodopsin gene, partial cds EU683610 [[proteorhodopsin super-cluster II/CFB-like cluster/A subcluster]] proteorhodopsin super-cluster II CFB-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_70m_depth China Sea marine 30.5 125.52 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCTGTATTCTTTTTCCTTTCAATGAATTCTGTTGACGGGAAATGGAAAACCTCGATATTAGTGTCTGGTCTTATTACATTTATTGCAGCCGTTCATTACTATTATATGAGGGATTATTGGGGAGCAACCGGAGAAACTCCTACCTTTTATCGTTATGTGGACTGGATTTTAACTGTTCCGCTAATGTGTGTTGAGTTCTACTTAATTCTAAAACCTTCTGGGGCTACAAAAGGATTAATGTGGAAATTAATTGGTTTATCAACTGTAATGTTAGTTACTGGTTACATTGGTGAA AMMAASVFFFLSMNSVDGKWKTSILVSGLITFIAAVHYYYMRDYWGATGETPTFYRYVDWILTVPLMCVEFYLILKPSGATKGLMWKLIGLSTVMLVTGYIGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCTGTATTCTTTTTCCTTTCAATGAATTCTGTTGACGGGAAATGGAAAACCTCGATATTAGTGTCTGGTCTTATTACATTTATTGCAGCCGTTCATTACTATTATATGAGGGATTATTGGGGA---------------------------------------------------GCAACCGGAGAAACTCCTACCTTTTATCGTTATGTGGACTGG------------------------ATTTTAACTGTTCCGCTAATGTGTGTTGAGTTCTACTTAATTCTAAAACCT---------TCT------GGGGCTACAAAA---GGATTA------------------------------------ATGTGGAAA---TTAATTGGTTTATCAACTGTAATGTTAGTTACTGGTTACATTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLSMNSVDGKWKTSILVSGLITFIAAVHYYYMRDYWG-----------------ATGETPTFYRYVDW--------ILTVPLMCVEFYLILKP---S--GATK-GL------------MWK-LIGLSTVMLVTGYIGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-a]_EU683606 [II-CFB-a] W8705_env_samples_EU683606 gi|187711685|gb|EU683606| Uncultured bacterium clone W8705 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W8705 putative proteorhodopsin gene, partial cds EU683606 [[proteorhodopsin super-cluster II/CFB-like cluster/A subcluster]] proteorhodopsin super-cluster II CFB-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_70m_depth China Sea marine 30.5 125.52 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCTGTATTCTTTTTCCTTTCAATGAATTCTGTTGACGGGAGATGGAAAACCTCGATATTAGTGTCTGGTCTTATTACATTTATTGCAGCCGTTCATTACTATTATATGAGGGATTATTGGGGAGCAACCGGAGAAACTCCTACCTTTTATCGTTATGTGGACTGGATTTTAACTGTTCCGCTAATGTGTGTTGAGTTCTACTTAATTCTAAAACCTTCTGGGGCTACAAAAGGATTAATGTGGAAATTAATTGGTTTATCAACTGTAATGTTAGTTACTGGTTACATTGGTGAA AMMAASVFFFLSMNSVDGRWKTSILVSGLITFIAAVHYYYMRDYWGATGETPTFYRYVDWILTVPLMCVEFYLILKPSGATKGLMWKLIGLSTVMLVTGYIGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCTGTATTCTTTTTCCTTTCAATGAATTCTGTTGACGGGAGATGGAAAACCTCGATATTAGTGTCTGGTCTTATTACATTTATTGCAGCCGTTCATTACTATTATATGAGGGATTATTGGGGA---------------------------------------------------GCAACCGGAGAAACTCCTACCTTTTATCGTTATGTGGACTGG------------------------ATTTTAACTGTTCCGCTAATGTGTGTTGAGTTCTACTTAATTCTAAAACCT---------TCT------GGGGCTACAAAA---GGATTA------------------------------------ATGTGGAAA---TTAATTGGTTTATCAACTGTAATGTTAGTTACTGGTTACATTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLSMNSVDGRWKTSILVSGLITFIAAVHYYYMRDYWG-----------------ATGETPTFYRYVDW--------ILTVPLMCVEFYLILKP---S--GATK-GL------------MWK-LIGLSTVMLVTGYIGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-a]_EU683588 [II-CFB-a] W83018_env_samples_EU683588 gi|187711649|gb|EU683588| Uncultured bacterium clone W83018 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W83018 putative proteorhodopsin gene, partial cds EU683588 [[proteorhodopsin super-cluster II/CFB-like cluster/A subcluster]] proteorhodopsin super-cluster II CFB-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_30m_depth China Sea marine 30.5 125.52 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCTGCATCTGTATTCTTTTTCCTTTCAATGAATTCTGTTGACGGGAAATGGAAAACCTCGATATTAGTGTCTGGTCTTATTACATTTATTGCAGCCGTTCATTACTATTATATGAGGGATTATTGGGGAGCAACCGGAGAAACTCCTACCTTTTATCGTTATGTGGACTGGATTTTAACTGTTCCGCTAATGTGTGTTGAGTTCTACTTAATTCTAAAACCTTCTGGGGCTACAAAAGGATTAATGTGGAAATTAATTGGTTTATCAACTGTAATGTTAGTTACTGGTTACATTGGTGAA AMMAASVFFFLSMNSVDGKWKTSILVSGLITFIAAVHYYYMRDYWGATGETPTFYRYVDWILTVPLMCVEFYLILKPSGATKGLMWKLIGLSTVMLVTGYIGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCTGCATCTGTATTCTTTTTCCTTTCAATGAATTCTGTTGACGGGAAATGGAAAACCTCGATATTAGTGTCTGGTCTTATTACATTTATTGCAGCCGTTCATTACTATTATATGAGGGATTATTGGGGA---------------------------------------------------GCAACCGGAGAAACTCCTACCTTTTATCGTTATGTGGACTGG------------------------ATTTTAACTGTTCCGCTAATGTGTGTTGAGTTCTACTTAATTCTAAAACCT---------TCT------GGGGCTACAAAA---GGATTA------------------------------------ATGTGGAAA---TTAATTGGTTTATCAACTGTAATGTTAGTTACTGGTTACATTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLSMNSVDGKWKTSILVSGLITFIAAVHYYYMRDYWG-----------------ATGETPTFYRYVDW--------ILTVPLMCVEFYLILKP---S--GATK-GL------------MWK-LIGLSTVMLVTGYIGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-a]_EU683580 [II-CFB-a] W8305_env_samples_EU683580 gi|187711633|gb|EU683580| Uncultured bacterium clone W8305 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W8305 putative proteorhodopsin gene, partial cds EU683580 [[proteorhodopsin super-cluster II/CFB-like cluster/A subcluster]] proteorhodopsin super-cluster II CFB-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_30m_depth China Sea marine 30.5 125.52 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCTGCATCTGTATTCTTTTTCCTTTCAATGAATTCTGTTGACGGGAAATGGAAAACCTCGATATTAGTGTCTGGTCTTATTACATTTATTGCAGCCGTTCATTACTATTATATGAGGGATTATTGGGGAGCAACCGGAGAAACTCCTACCTTTTATCGTTATGTGGACTGGATTTTAACTGTTCCGCTAATGTGTGTTGAGTTCTACTTAATTCTAAAACCTTCTGGGGCTACAAAAGGATTAATGTGGAAATTAATTGGTTTATCAACTGTAATGTTAGTTACTGGATACTTTGGTGAA AMMAASVFFFLSMNSVDGKWKTSILVSGLITFIAAVHYYYMRDYWGATGETPTFYRYVDWILTVPLMCVEFYLILKPSGATKGLMWKLIGLSTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCTGCATCTGTATTCTTTTTCCTTTCAATGAATTCTGTTGACGGGAAATGGAAAACCTCGATATTAGTGTCTGGTCTTATTACATTTATTGCAGCCGTTCATTACTATTATATGAGGGATTATTGGGGA---------------------------------------------------GCAACCGGAGAAACTCCTACCTTTTATCGTTATGTGGACTGG------------------------ATTTTAACTGTTCCGCTAATGTGTGTTGAGTTCTACTTAATTCTAAAACCT---------TCT------GGGGCTACAAAA---GGATTA------------------------------------ATGTGGAAA---TTAATTGGTTTATCAACTGTAATGTTAGTTACTGGATACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLSMNSVDGKWKTSILVSGLITFIAAVHYYYMRDYWG-----------------ATGETPTFYRYVDW--------ILTVPLMCVEFYLILKP---S--GATK-GL------------MWK-LIGLSTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-a]_EU683601 [II-CFB-a] W8701_env_samples_EU683601 gi|187711675|gb|EU683601| Uncultured bacterium clone W8701 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W8701 putative proteorhodopsin gene, partial cds EU683601 [[proteorhodopsin super-cluster II/CFB-like cluster/A subcluster]] proteorhodopsin super-cluster II CFB-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_70m_depth China Sea marine 30.5 125.52 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCTGCATCTGTATTCTTTTTCCTTTCAATGAATTCTGTTGACGGGAAATGGAAAACCTCGATATTAGTGTCTGGTCTTATTACATTTATTGCAGCCGTTCATTACTATTATATGAGGGATTATTGGGGAGCAACCGGAGAAACTCCTACCTTTTATCGTTATGTGGACTGGATTTTAACTGTTCCGCTAATGTGTGTTGAGTTCTACTTAATTCTAAAACCTTCTGGGGCTACAAAAGGATTAATGTGGAAATTAATTGGTTTATCAACTGTAATGTTAGTAACTGGATACTTTGGTGAA AMMAASVFFFLSMNSVDGKWKTSILVSGLITFIAAVHYYYMRDYWGATGETPTFYRYVDWILTVPLMCVEFYLILKPSGATKGLMWKLIGLSTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCTGCATCTGTATTCTTTTTCCTTTCAATGAATTCTGTTGACGGGAAATGGAAAACCTCGATATTAGTGTCTGGTCTTATTACATTTATTGCAGCCGTTCATTACTATTATATGAGGGATTATTGGGGA---------------------------------------------------GCAACCGGAGAAACTCCTACCTTTTATCGTTATGTGGACTGG------------------------ATTTTAACTGTTCCGCTAATGTGTGTTGAGTTCTACTTAATTCTAAAACCT---------TCT------GGGGCTACAAAA---GGATTA------------------------------------ATGTGGAAA---TTAATTGGTTTATCAACTGTAATGTTAGTAACTGGATACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLSMNSVDGKWKTSILVSGLITFIAAVHYYYMRDYWG-----------------ATGETPTFYRYVDW--------ILTVPLMCVEFYLILKP---S--GATK-GL------------MWK-LIGLSTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-a]_EU683604 [II-CFB-a] W8706_env_samples_EU683604 gi|187711681|gb|EU683604| Uncultured bacterium clone W8706 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W8706 putative proteorhodopsin gene, partial cds EU683604 [[proteorhodopsin super-cluster II/CFB-like cluster/A subcluster]] proteorhodopsin super-cluster II CFB-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_70m_depth China Sea marine 30.5 125.52 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCTGCATCTGTATTCTTTTTCCTTTCAATGAATTCTGTTGACGGGAAATGGAAAACCTCGATATTAGTGTCTGGTCTTATTACATTTATTGCAGCCGTTCATTACTATTATATGAGGGATTATTGGGGAGCAACCGGAGAAACTCCTACCTTTTATCGTTATGTGGACTGGATTTTAACTGTTCCGCTAATGTGTGTTGAGTTCTACTTAATTCTAAAACCTTCTGGGGCTACAAAAGGATTAATGTGGAAATTAATTGGTTTATCAACTGTAATGTTAGTTACTGGATACTTTGGTGAA AMMAASVFFFLSMNSVDGKWKTSILVSGLITFIAAVHYYYMRDYWGATGETPTFYRYVDWILTVPLMCVEFYLILKPSGATKGLMWKLIGLSTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCTGCATCTGTATTCTTTTTCCTTTCAATGAATTCTGTTGACGGGAAATGGAAAACCTCGATATTAGTGTCTGGTCTTATTACATTTATTGCAGCCGTTCATTACTATTATATGAGGGATTATTGGGGA---------------------------------------------------GCAACCGGAGAAACTCCTACCTTTTATCGTTATGTGGACTGG------------------------ATTTTAACTGTTCCGCTAATGTGTGTTGAGTTCTACTTAATTCTAAAACCT---------TCT------GGGGCTACAAAA---GGATTA------------------------------------ATGTGGAAA---TTAATTGGTTTATCAACTGTAATGTTAGTTACTGGATACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLSMNSVDGKWKTSILVSGLITFIAAVHYYYMRDYWG-----------------ATGETPTFYRYVDW--------ILTVPLMCVEFYLILKP---S--GATK-GL------------MWK-LIGLSTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-a]_EU683578 [II-CFB-a] W8302_env_samples_EU683578 gi|187711629|gb|EU683578| Uncultured bacterium clone W8302 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W8302 putative proteorhodopsin gene, partial cds EU683578 [[proteorhodopsin super-cluster II/CFB-like cluster/A subcluster]] proteorhodopsin super-cluster II CFB-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_30m_depth China Sea marine 30.5 125.52 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCTGCATCTGTATTCTTTTTCCTTTCAATGAATTCTGTTGACGGGAAATGGAAAACCTCGATATTAGTGTCTGGTCTTATTACATTTATTGCAGCCGTTCATTACTATTATATGAGGGATTATTGGGGAGCAACCGGAGAAACTCCTACCTTTTATCGTTATGTGGACTGGATTTTAACTGTTCCGCTAATGTGTGTTGAGTTCTACTTAATTCTAAAACCTTCTGGGGCTACAAAAGGATTAATGTGGAAATTAATTGGTTTATCAACTGTAATGTTAGTTACTGGTTACTTTGGTGAA AMMAASVFFFLSMNSVDGKWKTSILVSGLITFIAAVHYYYMRDYWGATGETPTFYRYVDWILTVPLMCVEFYLILKPSGATKGLMWKLIGLSTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCTGCATCTGTATTCTTTTTCCTTTCAATGAATTCTGTTGACGGGAAATGGAAAACCTCGATATTAGTGTCTGGTCTTATTACATTTATTGCAGCCGTTCATTACTATTATATGAGGGATTATTGGGGA---------------------------------------------------GCAACCGGAGAAACTCCTACCTTTTATCGTTATGTGGACTGG------------------------ATTTTAACTGTTCCGCTAATGTGTGTTGAGTTCTACTTAATTCTAAAACCT---------TCT------GGGGCTACAAAA---GGATTA------------------------------------ATGTGGAAA---TTAATTGGTTTATCAACTGTAATGTTAGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLSMNSVDGKWKTSILVSGLITFIAAVHYYYMRDYWG-----------------ATGETPTFYRYVDW--------ILTVPLMCVEFYLILKP---S--GATK-GL------------MWK-LIGLSTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-a]_EU683565 [II-CFB-a] W211_env_samples_EU683565 gi|187711603|gb|EU683565| Uncultured bacterium clone W211 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W211 putative proteorhodopsin gene, partial cds EU683565 [[proteorhodopsin super-cluster II/CFB-like cluster/A subcluster]] proteorhodopsin super-cluster II CFB-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_surface_water_[2m] China Sea marine 31.25 122.42 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCTGCATCTGTATTCTTTTTCCTTTCAATGAATTCTGTTGACGGGAAATGGAAAACCTCGATATTAGTGTCTGGTCTTATTACATTTATTGCAGCCGTTCATTACTATTATATGAGGGATTATTGGGGAGCAACCGGAGAAACTCCTACCTTTTATCGTTATGTGGACTGGATTTTAACTGTTCCGCTAATGTGTGTTGAGTTCTACTTAATTCTAAAACCTTCTGGGGCTACAAAAGGATTAATGTGGAAATTAATTGGTTTATCAACTGTAATGTTAGTTACTGGTTACTTTGGTGAA AMMAASVFFFLSMNSVDGKWKTSILVSGLITFIAAVHYYYMRDYWGATGETPTFYRYVDWILTVPLMCVEFYLILKPSGATKGLMWKLIGLSTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCTGCATCTGTATTCTTTTTCCTTTCAATGAATTCTGTTGACGGGAAATGGAAAACCTCGATATTAGTGTCTGGTCTTATTACATTTATTGCAGCCGTTCATTACTATTATATGAGGGATTATTGGGGA---------------------------------------------------GCAACCGGAGAAACTCCTACCTTTTATCGTTATGTGGACTGG------------------------ATTTTAACTGTTCCGCTAATGTGTGTTGAGTTCTACTTAATTCTAAAACCT---------TCT------GGGGCTACAAAA---GGATTA------------------------------------ATGTGGAAA---TTAATTGGTTTATCAACTGTAATGTTAGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLSMNSVDGKWKTSILVSGLITFIAAVHYYYMRDYWG-----------------ATGETPTFYRYVDW--------ILTVPLMCVEFYLILKP---S--GATK-GL------------MWK-LIGLSTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-a]_EU683607 [II-CFB-a] W8707_env_samples_EU683607 gi|187711687|gb|EU683607| Uncultured bacterium clone W8707 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W8707 putative proteorhodopsin gene, partial cds EU683607 [[proteorhodopsin super-cluster II/CFB-like cluster/A subcluster]] proteorhodopsin super-cluster II CFB-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_70m_depth China Sea marine 30.5 125.52 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCTGTATTCTTTTTCCTTTCAATGAATTCTGTTGACGGGAAATGGAAAACCTCGATATTAGTGTCTGGTCTTATTACATTTATTGCAGCCGTTCATTACTATTATATGAGGGATTATTGGGGAGCAACCGGAGAAACTCCTACCTTTTATCGTTATGTGGACTGGATTTTAACTGTTCCGCTAATGTGTGTTGAGTTCTACTTAATTCTAAAACCTTCTGGGGCTACAAAAGGATTAATGTGGAAATTAATTGGTTTATCAACTGTAATGTTAGTTACTGGTTACTTTGGTGAA AMMAASVFFFLSMNSVDGKWKTSILVSGLITFIAAVHYYYMRDYWGATGETPTFYRYVDWILTVPLMCVEFYLILKPSGATKGLMWKLIGLSTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCTGTATTCTTTTTCCTTTCAATGAATTCTGTTGACGGGAAATGGAAAACCTCGATATTAGTGTCTGGTCTTATTACATTTATTGCAGCCGTTCATTACTATTATATGAGGGATTATTGGGGA---------------------------------------------------GCAACCGGAGAAACTCCTACCTTTTATCGTTATGTGGACTGG------------------------ATTTTAACTGTTCCGCTAATGTGTGTTGAGTTCTACTTAATTCTAAAACCT---------TCT------GGGGCTACAAAA---GGATTA------------------------------------ATGTGGAAA---TTAATTGGTTTATCAACTGTAATGTTAGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLSMNSVDGKWKTSILVSGLITFIAAVHYYYMRDYWG-----------------ATGETPTFYRYVDW--------ILTVPLMCVEFYLILKP---S--GATK-GL------------MWK-LIGLSTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-a]_EU683577 [II-CFB-a] W8301_env_samples_EU683577 gi|187711627|gb|EU683577| Uncultured bacterium clone W8301 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W8301 putative proteorhodopsin gene, partial cds EU683577 [[proteorhodopsin super-cluster II/CFB-like cluster/A subcluster]] proteorhodopsin super-cluster II CFB-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_30m_depth China Sea marine 30.5 125.52 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCTGTATTCTTTTTCCTTTCAATGAATTCTGTTGACGGGAAATGGAAAACCTCGATATTAGTGTCTGGTCTTATTACATTTATTGCAGCCGTTCATTACTATTATATGAGGGATTATTGGGGAGCAACCGGAGAAACTCCTACCTTTTATCGTTATGTGGACTGGATTTTAACTGTTCCGCTAATGTGTGTTGAGTTCTACTTAATTCTAAAACCTTCTGGGGCTACAAAAGGATTAATGTGGAAATTAATTGGTTTATCAACTGTAATGTTAGTTAATCGTCGACCTGCAGGC AMMAASVFFFLSMNSVDGKWKTSILVSGLITFIAAVHYYYMRDYWGATGETPTFYRYVDWILTVPLMCVEFYLILKPSGATKGLMWKLIGLSTVMLVNRRPAG ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCTGTATTCTTTTTCCTTTCAATGAATTCTGTTGACGGGAAATGGAAAACCTCGATATTAGTGTCTGGTCTTATTACATTTATTGCAGCCGTTCATTACTATTATATGAGGGATTATTGGGGA---------------------------------------------------GCAACCGGAGAAACTCCTACCTTTTATCGTTATGTGGACTGG------------------------ATTTTAACTGTTCCGCTAATGTGTGTTGAGTTCTACTTAATTCTAAAACCT---------TCT------GGGGCTACAAAA---GGATTA------------------------------------ATGTGGAAA---TTAATTGGTTTATCAACTGTAATGTTAGTTAATCGTCGACCTGCAGGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLSMNSVDGKWKTSILVSGLITFIAAVHYYYMRDYWG-----------------ATGETPTFYRYVDW--------ILTVPLMCVEFYLILKP---S--GATK-GL------------MWK-LIGLSTVMLVNRRPAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-a]_EU683487 [II-CFB-a] A1025_3_env_samples_EU683487 gi|187711447|gb|EU683487| Uncultured bacterium clone A1025 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A1025 putative proteorhodopsin gene, partial cds EU683487 [[proteorhodopsin super-cluster II/CFB-like cluster/A subcluster]] proteorhodopsin super-cluster II CFB-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_surface_water_[2m] China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCTGTATTCTTTTTCCTTTCAATGAATTCTGTTGACGGGAAATGGAAAACCTCGATATTAGTGTCTGGTCTTATTACATTTATTGCAGCCGTTCATTACTATTACATGAGGGATTATTGGGGAGCAACCGGAGAAACTCCTACCTTTTATCGTTATGTGGACTGGATTTTAACCGTTCCATTAATGTGTGTTGAGTTCTACTTAATTCTAAAACCTTCTGGGGCTACAAAAGGATTAATGTGGAAATTAATTGGTTTATCAACTGTAATGTTAGTTACTGGATACTTTGGTGAA AMMAASVFFFLSMNSVDGKWKTSILVSGLITFIAAVHYYYMRDYWGATGETPTFYRYVDWILTVPLMCVEFYLILKPSGATKGLMWKLIGLSTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCTGTATTCTTTTTCCTTTCAATGAATTCTGTTGACGGGAAATGGAAAACCTCGATATTAGTGTCTGGTCTTATTACATTTATTGCAGCCGTTCATTACTATTACATGAGGGATTATTGGGGA---------------------------------------------------GCAACCGGAGAAACTCCTACCTTTTATCGTTATGTGGACTGG------------------------ATTTTAACCGTTCCATTAATGTGTGTTGAGTTCTACTTAATTCTAAAACCT---------TCT------GGGGCTACAAAA---GGATTA------------------------------------ATGTGGAAA---TTAATTGGTTTATCAACTGTAATGTTAGTTACTGGATACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLSMNSVDGKWKTSILVSGLITFIAAVHYYYMRDYWG-----------------ATGETPTFYRYVDW--------ILTVPLMCVEFYLILKP---S--GATK-GL------------MWK-LIGLSTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-a]_EU683481 [II-CFB-a] A107_3_env_samples_EU683481 gi|187711435|gb|EU683481| Uncultured bacterium clone A107 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A107 putative proteorhodopsin gene, partial cds EU683481 [[proteorhodopsin super-cluster II/CFB-like cluster/A subcluster]] proteorhodopsin super-cluster II CFB-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_surface_water_[2m] China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCTGTATTCTTTTTCCTTTCAATGAATTCTGTTGACGGGAAATGGAAAACCTCGATATTAGTGTCTGGTCTTATTACATTTATTGCGGCCGTTCATTACTATTACATGAGGGATTATTGGGGAGCAACCGGAGAAACTCCTACCTTTTATCGTTATGTGGACTGGATTTTAACTGTTCCATTAATGTGTGTTGAGTTCTGCTTAATTCTAAAACCTTCTGGGGCTACAAAAGGATTAATGTGGAAATTAATTGGTTTATCAACTGTAATGTTAGTTACTGGTTACTTTGGTGAA AMMAASVFFFLSMNSVDGKWKTSILVSGLITFIAAVHYYYMRDYWGATGETPTFYRYVDWILTVPLMCVEFCLILKPSGATKGLMWKLIGLSTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCTGTATTCTTTTTCCTTTCAATGAATTCTGTTGACGGGAAATGGAAAACCTCGATATTAGTGTCTGGTCTTATTACATTTATTGCGGCCGTTCATTACTATTACATGAGGGATTATTGGGGA---------------------------------------------------GCAACCGGAGAAACTCCTACCTTTTATCGTTATGTGGACTGG------------------------ATTTTAACTGTTCCATTAATGTGTGTTGAGTTCTGCTTAATTCTAAAACCT---------TCT------GGGGCTACAAAA---GGATTA------------------------------------ATGTGGAAA---TTAATTGGTTTATCAACTGTAATGTTAGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLSMNSVDGKWKTSILVSGLITFIAAVHYYYMRDYWG-----------------ATGETPTFYRYVDW--------ILTVPLMCVEFCLILKP---S--GATK-GL------------MWK-LIGLSTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-a]_EU683489 [II-CFB-a] A1601_env_samples_EU683489 gi|187711451|gb|EU683489| Uncultured bacterium clone A1601 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A1601 putative proteorhodopsin gene, partial cds EU683489 [[proteorhodopsin super-cluster II/CFB-like cluster/A subcluster]] proteorhodopsin super-cluster II CFB-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_60m_depth China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCTGCATCTGTATTCTTTTTCCTTTCAATGAATTCTGTTGACGGGAAATGGAAAACCTCGATATTAGTGTCTGGTCTTATTACATTTATTGCAGCCGTTCATTACTATTACATGAGGGATTATTGGGGAGCAACCGGAGAAACTCCTACCTTTTATCGTTATGTGGACTGGATTTTAACTGTTCCATTAATGTGTGTTGAGTTCTACTTAATTCTAAAACCTTCTGGGGCTACCAAAGGATTAATGTGGAAATTAATTGGTTTATCAACTGTAATGTTAGTTACTGGTTACTTTGGTGAA AMMAASVFFFLSMNSVDGKWKTSILVSGLITFIAAVHYYYMRDYWGATGETPTFYRYVDWILTVPLMCVEFYLILKPSGATKGLMWKLIGLSTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCTGCATCTGTATTCTTTTTCCTTTCAATGAATTCTGTTGACGGGAAATGGAAAACCTCGATATTAGTGTCTGGTCTTATTACATTTATTGCAGCCGTTCATTACTATTACATGAGGGATTATTGGGGA---------------------------------------------------GCAACCGGAGAAACTCCTACCTTTTATCGTTATGTGGACTGG------------------------ATTTTAACTGTTCCATTAATGTGTGTTGAGTTCTACTTAATTCTAAAACCT---------TCT------GGGGCTACCAAA---GGATTA------------------------------------ATGTGGAAA---TTAATTGGTTTATCAACTGTAATGTTAGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLSMNSVDGKWKTSILVSGLITFIAAVHYYYMRDYWG-----------------ATGETPTFYRYVDW--------ILTVPLMCVEFYLILKP---S--GATK-GL------------MWK-LIGLSTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-a]_EU683497 [II-CFB-a] A16013_env_samples_EU683497 gi|187711467|gb|EU683497| Uncultured bacterium clone A16013 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A16013 putative proteorhodopsin gene, partial cds EU683497 [[proteorhodopsin super-cluster II/CFB-like cluster/A subcluster]] proteorhodopsin super-cluster II CFB-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_60m_depth China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCTGCATCTGTATTCTTTTTCCTTTCAATGAATTCTGTTGACGGGAAATGGAAAACCTCGATATTAGTGTCTGGTCTTATTACATTTATTGCAGCCGTTCATTACTATTACATGAGGGATTATTGGGGAGCAACCGGAGAAACTCCTACCTTTTATCGTTATGTGGACTGGATTTTAACTGTTCCATTAATGTGTGTTGAGTTCTACTTAATTCTAAAACCTTCTGGGGCTACCAAAGGATTAATGTGGAAATTAATTGGTTTATCAACTGTAATGTTAGTTACTGGTTATATTGGTGAA AMMAASVFFFLSMNSVDGKWKTSILVSGLITFIAAVHYYYMRDYWGATGETPTFYRYVDWILTVPLMCVEFYLILKPSGATKGLMWKLIGLSTVMLVTGYIGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCTGCATCTGTATTCTTTTTCCTTTCAATGAATTCTGTTGACGGGAAATGGAAAACCTCGATATTAGTGTCTGGTCTTATTACATTTATTGCAGCCGTTCATTACTATTACATGAGGGATTATTGGGGA---------------------------------------------------GCAACCGGAGAAACTCCTACCTTTTATCGTTATGTGGACTGG------------------------ATTTTAACTGTTCCATTAATGTGTGTTGAGTTCTACTTAATTCTAAAACCT---------TCT------GGGGCTACCAAA---GGATTA------------------------------------ATGTGGAAA---TTAATTGGTTTATCAACTGTAATGTTAGTTACTGGTTATATTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLSMNSVDGKWKTSILVSGLITFIAAVHYYYMRDYWG-----------------ATGETPTFYRYVDW--------ILTVPLMCVEFYLILKP---S--GATK-GL------------MWK-LIGLSTVMLVTGYIGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-a]_EU683505 [II-CFB-a] A11006_env_samples_EU683505 gi|187711483|gb|EU683505| Uncultured bacterium clone A11006 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A11006 putative proteorhodopsin gene, partial cds EU683505 [[proteorhodopsin super-cluster II/CFB-like cluster/A subcluster]] proteorhodopsin super-cluster II CFB-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_100m_depth China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCTGTATTCTTTTTCCTTTCAATGAATTCTGTTGACGGGAAATGGAAAACCTCAATATTAGTGTCTGGTCTCATTACATTTATTGCAGCCGTTCATTACTATTACATGAGGGATTATTGGGGAGCAACCGGAGAAACTCCTACCTTTTATCGTTATGTGGACTGGATTTTAACTGTTCCATTAATGTGTGTTGAGTTCTACTTAATTCTAAAACCTTCTGGGGCTACGAAAGGATTAATGTGGAAATTAATTGGTTTATCAACTGTAATGTTAGTTACTGGTTACTTTGGTGAA AMMAASVFFFLSMNSVDGKWKTSILVSGLITFIAAVHYYYMRDYWGATGETPTFYRYVDWILTVPLMCVEFYLILKPSGATKGLMWKLIGLSTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCTGTATTCTTTTTCCTTTCAATGAATTCTGTTGACGGGAAATGGAAAACCTCAATATTAGTGTCTGGTCTCATTACATTTATTGCAGCCGTTCATTACTATTACATGAGGGATTATTGGGGA---------------------------------------------------GCAACCGGAGAAACTCCTACCTTTTATCGTTATGTGGACTGG------------------------ATTTTAACTGTTCCATTAATGTGTGTTGAGTTCTACTTAATTCTAAAACCT---------TCT------GGGGCTACGAAA---GGATTA------------------------------------ATGTGGAAA---TTAATTGGTTTATCAACTGTAATGTTAGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLSMNSVDGKWKTSILVSGLITFIAAVHYYYMRDYWG-----------------ATGETPTFYRYVDW--------ILTVPLMCVEFYLILKP---S--GATK-GL------------MWK-LIGLSTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-a]_EU683515 [II-CFB-a] A12004_env_samples_EU683515 gi|187711503|gb|EU683515| Uncultured bacterium clone A12004 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A12004 putative proteorhodopsin gene, partial cds EU683515 [[proteorhodopsin super-cluster II/CFB-like cluster/A subcluster]] proteorhodopsin super-cluster II CFB-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_200m_depth China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCTGCATCTGTATTCTTTTTCCTTTCAATGAATTCTGTTGACGGGAAATGGAAAACCTCAATATTAGTGTCTGGTCTCATTACATTTATTGCAGCCGTTCATTACTATTACATGAGGGATTATTGGGGAGCAACCGGAGAAACTCCTACCTTTTATCGTTATGTGGACTGGATTTTAACTGTTCCATTAATGTGTGTTGAGTTCTACTTAATTCTAAAACCTTCTGGGGCTACGAAAGGATTAATGTGGAAATTAATTGGTTTATCAACTGTAATGTTAGTTACTGGTTACTTTGGTGAA AMMAASVFFFLSMNSVDGKWKTSILVSGLITFIAAVHYYYMRDYWGATGETPTFYRYVDWILTVPLMCVEFYLILKPSGATKGLMWKLIGLSTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCTGCATCTGTATTCTTTTTCCTTTCAATGAATTCTGTTGACGGGAAATGGAAAACCTCAATATTAGTGTCTGGTCTCATTACATTTATTGCAGCCGTTCATTACTATTACATGAGGGATTATTGGGGA---------------------------------------------------GCAACCGGAGAAACTCCTACCTTTTATCGTTATGTGGACTGG------------------------ATTTTAACTGTTCCATTAATGTGTGTTGAGTTCTACTTAATTCTAAAACCT---------TCT------GGGGCTACGAAA---GGATTA------------------------------------ATGTGGAAA---TTAATTGGTTTATCAACTGTAATGTTAGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLSMNSVDGKWKTSILVSGLITFIAAVHYYYMRDYWG-----------------ATGETPTFYRYVDW--------ILTVPLMCVEFYLILKP---S--GATK-GL------------MWK-LIGLSTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-a]_EU683569 [II-CFB-a] W8020_env_samples_EU683569 gi|187711611|gb|EU683569| Uncultured bacterium clone W8020 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W8020 putative proteorhodopsin gene, partial cds EU683569 [[proteorhodopsin super-cluster II/CFB-like cluster/A subcluster]] proteorhodopsin super-cluster II CFB-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_surface_water_[2m] China Sea marine 30.5 125.52 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCTGCATCTGTATTCTTTTTCCTTTCAATGAATTCTGTTGACGGGAAGTGGAAAACCTCAATATTAGTGTCTGGTCTTATTACATTTATTGCGGCCGTTCATTACTATTACATGAGGGATTATTGGGGAGCAACCGGAGAAACTCCTACTTTTTATCGTTATGTGGACTGGATTTTAACTGTTCCATTAATGTGTGTTGAGTTCTACTTAATTCTAAAACCCTCTGGGGCTACCAAAGGATTAATGTGGAAATTAATTGGTTTATCAACTGTAATGTTAGTTACTGGTTACATTGGTGAA AMMAASVFFFLSMNSVDGKWKTSILVSGLITFIAAVHYYYMRDYWGATGETPTFYRYVDWILTVPLMCVEFYLILKPSGATKGLMWKLIGLSTVMLVTGYIGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCTGCATCTGTATTCTTTTTCCTTTCAATGAATTCTGTTGACGGGAAGTGGAAAACCTCAATATTAGTGTCTGGTCTTATTACATTTATTGCGGCCGTTCATTACTATTACATGAGGGATTATTGGGGA---------------------------------------------------GCAACCGGAGAAACTCCTACTTTTTATCGTTATGTGGACTGG------------------------ATTTTAACTGTTCCATTAATGTGTGTTGAGTTCTACTTAATTCTAAAACCC---------TCT------GGGGCTACCAAA---GGATTA------------------------------------ATGTGGAAA---TTAATTGGTTTATCAACTGTAATGTTAGTTACTGGTTACATTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLSMNSVDGKWKTSILVSGLITFIAAVHYYYMRDYWG-----------------ATGETPTFYRYVDW--------ILTVPLMCVEFYLILKP---S--GATK-GL------------MWK-LIGLSTVMLVTGYIGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-a]_EU683499 [II-CFB-a] A16015_env_samples_EU683499 gi|187711471|gb|EU683499| Uncultured bacterium clone A16015 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A16015 putative proteorhodopsin gene, partial cds EU683499 [[proteorhodopsin super-cluster II/CFB-like cluster/A subcluster]] proteorhodopsin super-cluster II CFB-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_60m_depth China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCTGCATCTGTATTCTTTTTCCTTTCAATGAATTCTGTTGATGGGAAATGGAAAACCTCAATATTAGTGTCTGGTCTCATTACATTTATTGCTGCCGTTCATTACTATTACATGAGGGATTATTGGGGAGCAACCGGAGAAACTCCTACTTTTTATCGTTATGTGGACTGGATTTTAACTGTTCCGTTAATGTGTGTTGAGTTCTACTTAATTCTAAAACCCTCTGGGGCTACGAAAGGATTAATGTGGAAATTAATTGGTTTATCAACTGTAATGTTAGTTACTGGTTACTTTGGTGAA AMMAASVFFFLSMNSVDGKWKTSILVSGLITFIAAVHYYYMRDYWGATGETPTFYRYVDWILTVPLMCVEFYLILKPSGATKGLMWKLIGLSTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCTGCATCTGTATTCTTTTTCCTTTCAATGAATTCTGTTGATGGGAAATGGAAAACCTCAATATTAGTGTCTGGTCTCATTACATTTATTGCTGCCGTTCATTACTATTACATGAGGGATTATTGGGGA---------------------------------------------------GCAACCGGAGAAACTCCTACTTTTTATCGTTATGTGGACTGG------------------------ATTTTAACTGTTCCGTTAATGTGTGTTGAGTTCTACTTAATTCTAAAACCC---------TCT------GGGGCTACGAAA---GGATTA------------------------------------ATGTGGAAA---TTAATTGGTTTATCAACTGTAATGTTAGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLSMNSVDGKWKTSILVSGLITFIAAVHYYYMRDYWG-----------------ATGETPTFYRYVDW--------ILTVPLMCVEFYLILKP---S--GATK-GL------------MWK-LIGLSTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-a]_EU683494 [II-CFB-a] A1604_env_samples_EU683494 gi|187711461|gb|EU683494| Uncultured bacterium clone A1604 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A1604 putative proteorhodopsin gene, partial cds EU683494 [[proteorhodopsin super-cluster II/CFB-like cluster/A subcluster]] proteorhodopsin super-cluster II CFB-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_60m_depth China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCTGTATTCTTTTTCCTTTCAATGAATTCTGTTGATGGGAAATGGAAAACCTCAATATTAGTGTCTGGTCTCATTACATTTATTGCTGCCGTTCATTACTATTACATGAGGGATTATTGGGGAGCAACCGGAGAAACTCCTACTTTTTATCGTTATGTGGACTGGATTTTAACTGTTCCGTTAATGTGTGTTGAGTTCTACTTAATTCTAAAACCCTCTGGGGCTACGAAAGGATTAATGTGGAAATTAATTGGTTTATCAACTGTAATGTTAGTTACTGGTTACTTTGGTGAA AMMAASVFFFLSMNSVDGKWKTSILVSGLITFIAAVHYYYMRDYWGATGETPTFYRYVDWILTVPLMCVEFYLILKPSGATKGLMWKLIGLSTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCTGTATTCTTTTTCCTTTCAATGAATTCTGTTGATGGGAAATGGAAAACCTCAATATTAGTGTCTGGTCTCATTACATTTATTGCTGCCGTTCATTACTATTACATGAGGGATTATTGGGGA---------------------------------------------------GCAACCGGAGAAACTCCTACTTTTTATCGTTATGTGGACTGG------------------------ATTTTAACTGTTCCGTTAATGTGTGTTGAGTTCTACTTAATTCTAAAACCC---------TCT------GGGGCTACGAAA---GGATTA------------------------------------ATGTGGAAA---TTAATTGGTTTATCAACTGTAATGTTAGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLSMNSVDGKWKTSILVSGLITFIAAVHYYYMRDYWG-----------------ATGETPTFYRYVDW--------ILTVPLMCVEFYLILKP---S--GATK-GL------------MWK-LIGLSTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-a]_KJ926151 [II-CFB-a] BOUM_OTU064_env_samples gb|KJ926151| Uncultured bacterium clone BOUM OTU064 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU064 putative proteorhodopsin gene, partial cds KJ926151 [[proteorhodopsin super-cluster II/CFB-like cluster/A subcluster]] proteorhodopsin super-cluster II CFB-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 43.4235 7.8533 #na #na #na #na #na GTTGATTGGATTTTAACTGTACCACTTATGTGTGTTGAGTTTTATCTAATTTTAAAGCCATCAGGCGCTACTAAAGGTATGCTATGGAAATTAATTGGTCTTTCAACATTAATGCTTGTTACTGGATATTTCGGTGAAGCAGGTGTAATGGGATTAGATGCTCAACTATGGGGTCTAGTTTCAGGTTTAGCATATTTTGCAATTGTTCATGAAATATACATGGGTAATGCAGCTAGCCTTGCGAAATCTGCAGGAGGAAATGTAGAAAGTGCACATAAGATGTTATGTAAATTCGTACTGATAGGCTGGGCCATTTAC VDWILTVPLMCVEFYLILKPSGATKGMLWKLIGLSTLMLVTGYFGEAGVMGLDAQLWGLVSGLAYFAIVHEIYMGNAASLAKSAGGNVESAHKMLCKFVLIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGATTGG------------------------ATTTTAACTGTACCACTTATGTGTGTTGAGTTTTATCTAATTTTAAAGCCA---------TCA------GGCGCTACTAAA---GGTATG------------------------------------CTATGGAAA---TTAATTGGTCTTTCAACATTAATGCTTGTTACTGGATATTTCGGTGAA---------GCA------------------GGT------GTAATG------------------------------------------------------------------GGA---------------------------TTAGATGCT------------------CAACTATGG---GGTCTAGTTTCAGGTTTAGCATATTTTGCAATTGTTCATGAAATA---------------TAC------ATG---GGTAATGCAGCTAGCCTTGCGAAATCT------GCA---GGAGGAAAT---GTA---GAA---AGT---GCA---CAT---AAG---ATGTTA---TGTAAATTCGTACTGATA---------------------------------------------------------------GGCTGG---------GCCATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------ILTVPLMCVEFYLILKP---S--GATK-GM------------LWK-LIGLSTLMLVTGYFGE---A------G--VM----------------------G---------LDA------QLW-GLVSGLAYFAIVHEI-----Y--M-GNAASLAKS--A-GGN-V-E-S-A-H-K-ML-CKFVLI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-a]_EU683516 [II-CFB-a] A12006_env_samples_EU683516 gi|187711505|gb|EU683516| Uncultured bacterium clone A12006 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A12006 putative proteorhodopsin gene, partial cds EU683516 [[proteorhodopsin super-cluster II/CFB-like cluster/A subcluster]] proteorhodopsin super-cluster II CFB-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_200m_depth China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCTGCATCTGTATTCTTTTTTCTGTCAATGAATTCTGTTGATGCAAAATGGAGAACATCAATTCTAGTGTCTGGTCTTATTACATTTATTGCTGCCGTTCACTATTATTACATGAGAGACTACTGGGGAGCAACTGGAGAAACTCCAACTTTTTATCGCTATGTAGATTGGATTTTAACTGTCCCTCTAATGTGTGTTGAATTCTATCTTATCCTAAGGCCCTCAGGAGCTACAAAAGGATTAATGTGGAAATTAATTGGATTATCAACTGTCATGCTTGTTACTGGTTACTTTGGTGAA AMMAASVFFFLSMNSVDAKWRTSILVSGLITFIAAVHYYYMRDYWGATGETPTFYRYVDWILTVPLMCVEFYLILRPSGATKGLMWKLIGLSTVMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCTGCATCTGTATTCTTTTTTCTGTCAATGAATTCTGTTGATGCAAAATGGAGAACATCAATTCTAGTGTCTGGTCTTATTACATTTATTGCTGCCGTTCACTATTATTACATGAGAGACTACTGGGGA---------------------------------------------------GCAACTGGAGAAACTCCAACTTTTTATCGCTATGTAGATTGG------------------------ATTTTAACTGTCCCTCTAATGTGTGTTGAATTCTATCTTATCCTAAGGCCC---------TCA------GGAGCTACAAAA---GGATTA------------------------------------ATGTGGAAA---TTAATTGGATTATCAACTGTCATGCTTGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASVFFFLSMNSVDAKWRTSILVSGLITFIAAVHYYYMRDYWG-----------------ATGETPTFYRYVDW--------ILTVPLMCVEFYLILRP---S--GATK-GL------------MWK-LIGLSTVMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-a]_EU683479 [II-CFB-a] A1012_02_env_samples_EU683479 gi|187711431|gb|EU683479| Uncultured bacterium clone A1012 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A1012 putative proteorhodopsin gene, partial cds EU683479 [[proteorhodopsin super-cluster II/CFB-like cluster/A subcluster]] proteorhodopsin super-cluster II CFB-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_surface_water_[2m] China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCTTCAGCTTTTTTCTTCCTATCAATGAATTCTTTTGATTCAAAGTGGAGAACGTCAATCCTAGTTTCAGGTTTGATTACTTTTATTGCTGCTGTTCATTATTGGTATATGAGAGATTATTATTTAGAAACAAACAGTTCGCCTACATTTTTTAGATACGTTGACTGGATACTAACAGTTCCATTAATGTGTGTTGAGTTTTACTTAATTCTAAAAGCTGCTGGTGCTACTAAAAGTATGATGTGGAGATTAATTTTCTTATCTACTATAATGTTAGTTACTGGTTACTTTGGTGAA AMMAASAFFFLSMNSFDSKWRTSILVSGLITFIAAVHYWYMRDYYLETNSSPTFFRYVDWILTVPLMCVEFYLILKAAGATKSMMWRLIFLSTIMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCTTCAGCTTTTTTCTTCCTATCAATGAATTCTTTTGATTCAAAGTGGAGAACGTCAATCCTAGTTTCAGGTTTGATTACTTTTATTGCTGCTGTTCATTATTGGTATATGAGAGATTATTATTTA---------------------------------------------------GAAACAAACAGTTCGCCTACATTTTTTAGATACGTTGACTGG------------------------ATACTAACAGTTCCATTAATGTGTGTTGAGTTTTACTTAATTCTAAAAGCT---------GCT------GGTGCTACTAAA---AGTATG------------------------------------ATGTGGAGA---TTAATTTTCTTATCTACTATAATGTTAGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDSKWRTSILVSGLITFIAAVHYWYMRDYYL-----------------ETNSSPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GATK-SM------------MWR-LIFLSTIMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-a]_EU683471 [II-CFB-a] A101_02_env_samples_EU683471 gi|187711415|gb|EU683471| Uncultured bacterium clone A101 putative proteorhodopsin gene, partial cds Uncultured bacterium clone A101 putative proteorhodopsin gene, partial cds EU683471 [[proteorhodopsin super-cluster II/CFB-like cluster/A subcluster]] proteorhodopsin super-cluster II CFB-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-nov-06 South_China_Sea_surface_water_[2m] China Sea marine 20.12 115.77 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCTGCATCGGCCTTTTTCTTCCTATCAATGAATTCTTTTGATTCAAAATGGAGAACGTCAATCCTAGTTTCAGGTTTGATTACTTTTATTGCTGCTGTTCATTATTGGTATATGAGAGATTATTATTTAGAAACAAACAGTTCGCCTACATTTTTTAGATACGTTGACTGGATACTAACAGTTCCATTAATGTGTGTTGAGTTTTACTTAATTCTAAAAGCTGCTGGTGCTACTAAAAGTATGATGTGGAGATTAATTTTCTTATCTACTATAATGTTAGTTACTGGTTACTTTGGTGAA AMMAASAFFFLSMNSFDSKWRTSILVSGLITFIAAVHYWYMRDYYLETNSSPTFFRYVDWILTVPLMCVEFYLILKAAGATKSMMWRLIFLSTIMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCTGCATCGGCCTTTTTCTTCCTATCAATGAATTCTTTTGATTCAAAATGGAGAACGTCAATCCTAGTTTCAGGTTTGATTACTTTTATTGCTGCTGTTCATTATTGGTATATGAGAGATTATTATTTA---------------------------------------------------GAAACAAACAGTTCGCCTACATTTTTTAGATACGTTGACTGG------------------------ATACTAACAGTTCCATTAATGTGTGTTGAGTTTTACTTAATTCTAAAAGCT---------GCT------GGTGCTACTAAA---AGTATG------------------------------------ATGTGGAGA---TTAATTTTCTTATCTACTATAATGTTAGTTACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDSKWRTSILVSGLITFIAAVHYWYMRDYYL-----------------ETNSSPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GATK-SM------------MWR-LIFLSTIMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-a]_EU683555 [II-CFB-a] W113_env_samples_EU683555 gi|187711583|gb|EU683555| Uncultured bacterium clone W113 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W113 putative proteorhodopsin gene, partial cds EU683555 [[proteorhodopsin super-cluster II/CFB-like cluster/A subcluster]] proteorhodopsin super-cluster II CFB-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_[near_Yangtzi_River_estuary]_surface_water_[2m] China Sea marine 31.3 122.2 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCTGCATCGGCTTTTTTCTTTCTTTCAATGAATTCTTTTGATTCTAAATGGAGAACGTCGATATTAGTTTCAGGTCTTATTACTTTCATTGCTGCTGTTCATTACTGGTATATGAGAGATTATTGGGCAGAAACTGGTGAATCTCCAACTTTCTTTAGATATGTTGATTGGATACTAACTGTACCTTTAATGTGTGTTGAGTTTTACTTGATTTTAAAAGCTGCAGGTGCCACAAAAAGTATGATGTGGAGATTAATCTTCTTGTCAACAATAATGCTTGTAACTGGTTACTTTGGTGAA AMMAASAFFFLSMNSFDSKWRTSILVSGLITFIAAVHYWYMRDYWAETGESPTFFRYVDWILTVPLMCVEFYLILKAAGATKSMMWRLIFLSTIMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCTGCATCGGCTTTTTTCTTTCTTTCAATGAATTCTTTTGATTCTAAATGGAGAACGTCGATATTAGTTTCAGGTCTTATTACTTTCATTGCTGCTGTTCATTACTGGTATATGAGAGATTATTGGGCA---------------------------------------------------GAAACTGGTGAATCTCCAACTTTCTTTAGATATGTTGATTGG------------------------ATACTAACTGTACCTTTAATGTGTGTTGAGTTTTACTTGATTTTAAAAGCT---------GCA------GGTGCCACAAAA---AGTATG------------------------------------ATGTGGAGA---TTAATCTTCTTGTCAACAATAATGCTTGTAACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDSKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------ETGESPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GATK-SM------------MWR-LIFLSTIMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-a]_EU683557 [II-CFB-a] W117_env_samples_EU683557 gi|187711587|gb|EU683557| Uncultured bacterium clone W117 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W117 putative proteorhodopsin gene, partial cds EU683557 [[proteorhodopsin super-cluster II/CFB-like cluster/A subcluster]] proteorhodopsin super-cluster II CFB-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_[near_Yangtzi_River_estuary]_surface_water_[2m] China Sea marine 31.3 122.2 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCATCGGCTTTTTTCTTTCTTTCAATGAATTCTTTTGATTCTAAATGGAGAACGTCGATATTAGTTTCAGGTCTTATTACCTTCATTGCTGCTGTTCATTACTGGTATATGAGAGATTATTGGGCAGAAACTGGTGAATCTCCAACTTTCTTTAGATATGTTGATTGGATACTAACTGTACCTTTAATGTGTGTTGAGTTTTACTTGATTTTAAAAGCTGCAGGTGCCACAAAAAGTATGATGTGGAGATTAATCTTCTTGTCAACAATAATGCTCGTAACTGGTTACTTTGGTGAA AMMAASAFFFLSMNSFDSKWRTSILVSGLITFIAAVHYWYMRDYWAETGESPTFFRYVDWILTVPLMCVEFYLILKAAGATKSMMWRLIFLSTIMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCATCGGCTTTTTTCTTTCTTTCAATGAATTCTTTTGATTCTAAATGGAGAACGTCGATATTAGTTTCAGGTCTTATTACCTTCATTGCTGCTGTTCATTACTGGTATATGAGAGATTATTGGGCA---------------------------------------------------GAAACTGGTGAATCTCCAACTTTCTTTAGATATGTTGATTGG------------------------ATACTAACTGTACCTTTAATGTGTGTTGAGTTTTACTTGATTTTAAAAGCT---------GCA------GGTGCCACAAAA---AGTATG------------------------------------ATGTGGAGA---TTAATCTTCTTGTCAACAATAATGCTCGTAACTGGTTACTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSMNSFDSKWRTSILVSGLITFIAAVHYWYMRDYWA-----------------ETGESPTFFRYVDW--------ILTVPLMCVEFYLILKA---A--GATK-SM------------MWR-LIFLSTIMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-a]_KJ926164 [II-CFB-a] BOUM_OTU077_env_samples gb|KJ926164| Uncultured bacterium clone BOUM OTU077 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU077 putative proteorhodopsin gene, partial cds KJ926164 [[proteorhodopsin super-cluster II/CFB-like cluster/A subcluster]] proteorhodopsin super-cluster II CFB-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 41.996333 4.9855 #na #na #na #na #na GTTGACTGGATACTAACTGTACCTTTAATGTGTGTTGAGTTTTACTTGATTTTAAAAGCTGCAGGTGCCACAAAAAGTATGATGTGGAGATTAATCTTCTTGTCAACAATAATGCTTGTTACTGGTTACTTTGGTGAAGCTGTTTATCCTGGTCAAGCTCAATTATGGGGTCTAGTTTCTGGTATTGCCTATTTTGTCATAGTTTATGATATATGGTTCGGTGGTGCTGCCAAACTTGCTGCTGCTGCGGGAGGTGCTGTCGAAAGTGCGCACAAAACTCTTTGTAAATTTGTACTTATTGGCTGGGCAATCTAC VDWILTVPLMCVEFYLILKAAGATKSMMWRLIFLSTIMLVTGYFGEAVYPGQAQLWGLVSGIAYFVIVYDIWFGGAAKLAAAAGGAVESAHKTLCKFVLIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGACTGG------------------------ATACTAACTGTACCTTTAATGTGTGTTGAGTTTTACTTGATTTTAAAAGCT---------GCA------GGTGCCACAAAA---AGTATG------------------------------------ATGTGGAGA---TTAATCTTCTTGTCAACAATAATGCTTGTTACTGGTTACTTTGGTGAA---------GCT------------------GTT------TATCCT------------------------------------------------------------------------------------------------GGTCAAGCT------------------CAATTATGG---GGTCTAGTTTCTGGTATTGCCTATTTTGTCATAGTTTATGATATA---------------TGG------TTC---GGTGGTGCTGCCAAACTTGCTGCTGCT------GCG---GGAGGTGCT---GTC---GAA---AGT---GCG---CAC---AAA---ACTCTT---TGTAAATTTGTACTTATT---------------------------------------------------------------GGCTGG---------GCAATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------ILTVPLMCVEFYLILKA---A--GATK-SM------------MWR-LIFLSTIMLVTGYFGE---A------V--YP--------------------------------GQA------QLW-GLVSGIAYFVIVYDI-----W--F-GGAAKLAAA--A-GGA-V-E-S-A-H-K-TL-CKFVLI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB]_JX863339 [II-CFB] RCC2397_Flavobacterium_JX863339 gi|425477628|gb|JX863339| Flavobacterium sp RCC2397 putative proteorhodopsin gene, partial cds Flavobacterium sp RCC2397 putative proteorhodopsin gene, partial cds JX863339 [[proteorhodopsin super-cluster II/CFB-like cluster]] proteorhodopsin super-cluster II CFB-like cluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Flavobacterium] taxon:1262149 genomic_DNA strain 01-DEC-2012 18Aug2009 3m_depth Arctic Ocean marine 71.22 -136.71 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGGTGTTAACTGTGCCATTGATGGCTTTAGAATTTTATTTAATTTTAAAAGTTGCTGGCGCTAAACAAAGTTTACTTTGGAAATTGATTTTGTACTCAGTAATCATGTTGGTTACAGGTTATTTAGGAGAAACTATTTTCAGTGATCAAGCTGCATTTTGGGGCCTTATTTCAGGTCTTGCTTACTTTGCAATTGTGTACGAAATCTGGTTTGGTGAGGCTGCTAAATTGGCTAAAGCTGCAGGCGGAAATGTATCACATGCACACAACATTTTATGTTGGTTTGTATTAGTT WVLTVPLMALEFYLILKVAGAKQSLLWKLILYSVIMLVTGYLGETIFSDQAAFWGLISGLAYFAIVYEIWFGEAAKLAKAAGGNVSHAHNILCWFVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------GTGTTAACTGTGCCATTGATGGCTTTAGAATTTTATTTAATTTTAAAAGTT---------GCT------GGCGCTAAACAA---AGTTTA------------------------------------CTTTGGAAA---TTGATTTTGTACTCAGTAATCATGTTGGTTACAGGTTATTTAGGAGAA---------ACT------------------ATT------TTCAGT------------------------------------------------------------------------------------------------GATCAAGCT------------------GCATTTTGG---GGCCTTATTTCAGGTCTTGCTTACTTTGCAATTGTGTACGAAATC---------------TGG------TTT---GGTGAGGCTGCTAAATTGGCTAAAGCT------GCA---GGCGGAAAT---GTA---TCA---CAT---GCA---CAC---AAC---ATTTTA---TGTTGGTTTGTATTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------VLTVPLMALEFYLILKV---A--GAKQ-SL------------LWK-LILYSVIMLVTGYLGE---T------I--FS--------------------------------DQA------AFW-GLISGLAYFAIVYEI-----W--F-GEAAKLAKA--A-GGN-V-S-H-A-H-N-IL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Flavobacterium]_AB557577 [II-CFB-Flavobacterium] SA416_Flavobacterium_AB557577 gi|376317488|gb|AB557577| Flavobacterium sp SA416 PR gene for proteorhodopsin, partial cds Flavobacterium sp SA416 PR gene for proteorhodopsin, partial cds AB557577 [[proteorhodopsin super-cluster II/CFB-like cluster/Flavobacterium-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Flavobacterium-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Flavobacterium] taxon:754401 genomic_DNA strain 03MAY2012 #na sea_ice Pacific Ocean marine 35 139.3333 Diversity and functional analysis of proteorhodopsin in marine Flavobacteria Yoshizawa,S., Kawanabe,A., Ito,H., Kandori,H. and Kogure,K. Environ. Microbiol. 14 (5), 12401248 (2012) 22329552 #na TTCTTTTTATCGCTGAGCCAGTTTGACAAAAAATGGCGCACTTCAGTGTTGGTTTCAGGTTTGATTACTTTTATTGCCGCAGTACATTATTTCTACATGAGAGATTATTGGGCAACTTTCGGTGAATCGCCTACTTTTTTCCGTTATGTTGACTGGGTATTGACGGTGCCATTAATGTGTCTTGAGTTTTATTTAATATTGAAAGTTGCAGGGGCTAAGCAGTCTTTGTTGTGGAAAATGATTATCTATTCTCTGATCATGTTAGTTACAGGTTATTTCGGTGAGGTCGTTGATCCTAGTAACGCAGCACTTTGGGGATTCGCTTCAGGAGTTGCTTATTTCTTAATTGTTTATGAAATATGGATTGGTGAGGCTGCTAAATTGGCCAAAGCTGCCGGTGGAAACACACTTGCTGCACACAAAATA FFLSLSQFDKKWRTSVLVSGLITFIAAVHYFYMRDYWATFGESPTFFRYVDWVLTVPLMCLEFYLILKVAGAKQSLLWKMIIYSLIMLVTGYFGEVVDPSNAALWGFASGVAYFLIVYEIWIGEAAKLAKAAGGNTLAAHKI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTTTATCGCTGAGCCAGTTTGACAAAAAATGGCGCACTTCAGTGTTGGTTTCAGGTTTGATTACTTTTATTGCCGCAGTACATTATTTCTACATGAGAGATTATTGGGCA---------------------------------------------------ACTTTCGGTGAATCGCCTACTTTTTTCCGTTATGTTGACTGG------------------------GTATTGACGGTGCCATTAATGTGTCTTGAGTTTTATTTAATATTGAAAGTT---------GCA------GGGGCTAAGCAG---TCTTTG------------------------------------TTGTGGAAA---ATGATTATCTATTCTCTGATCATGTTAGTTACAGGTTATTTCGGTGAG---------GTC------------------GTT------GATCCT------------------------------------------------------------------------------------------------AGTAACGCA------------------GCACTTTGG---GGATTCGCTTCAGGAGTTGCTTATTTCTTAATTGTTTATGAAATA---------------TGG------ATT---GGTGAGGCTGCTAAATTGGCCAAAGCT------GCC---GGTGGAAAC---ACA---CTT---GCT---GCA---CAC---AAA---ATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------FFLSLSQFDKKWRTSVLVSGLITFIAAVHYFYMRDYWA-----------------TFGESPTFFRYVDW--------VLTVPLMCLEFYLILKV---A--GAKQ-SL------------LWK-MIIYSLIMLVTGYFGE---V------V--DP--------------------------------SNA------ALW-GFASGVAYFLIVYEI-----W--I-GEAAKLAKA--A-GGN-T-L-A-A-H-K-I---------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Flavobacterium]_AB557580 [II-CFB-Flavobacterium] SA430_Flavobacterium_AB557580 gi|376317494|gb|AB557580| Flavobacterium sp SA430 PR gene for proteorhodopsin, partial cds Flavobacterium sp SA430 PR gene for proteorhodopsin, partial cds AB557580 [[proteorhodopsin super-cluster II/CFB-like cluster/Flavobacterium-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Flavobacterium-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Flavobacterium] taxon:754404 genomic_DNA strain 03MAY2012 #na sea_ice Pacific Ocean marine 35 139.3333 Diversity and functional analysis of proteorhodopsin in marine Flavobacteria Yoshizawa,S., Kawanabe,A., Ito,H., Kandori,H. and Kogure,K. Environ. Microbiol. 14 (5), 12401248 (2012) 22329552 #na TTCTTTTTATCGCTGAGCCAGTTTGACAAAAAATGGCGCACTTCAGTGTTGGTTTCAGGTTTGATTACTTTTATTGCCGCAGTACATTATTTCTACATGAGAGATTATTGGGCAACTTTCGGTGAATCGCCTACTTTTTTCCGTTATGTTGACTGGGTATTGACGGTGCCATTAATGTGTCTTGAGTTTTATTTAATATTGAAAGTTGCAGGGGCTAAGCAGTCTTTGTTGTGGAAAATGATTATCTATTCTCTGATCATGTTAGTTACAGGTTATTTCGGTGAGGTCGTTGATCCTAGTAACGCAGCACTTTGGGGATTCGCTTCAGGAGTTGCTTATTTCTTAATTGTTTATGAAATATGGATTGGTGAGGCTGCTAAATTGGCCAAAGCTGCCGGTGGAAACACACTTGCTGCACACAAAATA FFLSLSQFDKKWRTSVLVSGLITFIAAVHYFYMRDYWATFGESPTFFRYVDWVLTVPLMCLEFYLILKVAGAKQSLLWKMIIYSLIMLVTGYFGEVVDPSNAALWGFASGVAYFLIVYEIWIGEAAKLAKAAGGNTLAAHKI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTTTATCGCTGAGCCAGTTTGACAAAAAATGGCGCACTTCAGTGTTGGTTTCAGGTTTGATTACTTTTATTGCCGCAGTACATTATTTCTACATGAGAGATTATTGGGCA---------------------------------------------------ACTTTCGGTGAATCGCCTACTTTTTTCCGTTATGTTGACTGG------------------------GTATTGACGGTGCCATTAATGTGTCTTGAGTTTTATTTAATATTGAAAGTT---------GCA------GGGGCTAAGCAG---TCTTTG------------------------------------TTGTGGAAA---ATGATTATCTATTCTCTGATCATGTTAGTTACAGGTTATTTCGGTGAG---------GTC------------------GTT------GATCCT------------------------------------------------------------------------------------------------AGTAACGCA------------------GCACTTTGG---GGATTCGCTTCAGGAGTTGCTTATTTCTTAATTGTTTATGAAATA---------------TGG------ATT---GGTGAGGCTGCTAAATTGGCCAAAGCT------GCC---GGTGGAAAC---ACA---CTT---GCT---GCA---CAC---AAA---ATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------FFLSLSQFDKKWRTSVLVSGLITFIAAVHYFYMRDYWA-----------------TFGESPTFFRYVDW--------VLTVPLMCLEFYLILKV---A--GAKQ-SL------------LWK-MIIYSLIMLVTGYFGE---V------V--DP--------------------------------SNA------ALW-GFASGVAYFLIVYEI-----W--I-GEAAKLAKA--A-GGN-T-L-A-A-H-K-I---------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Flavobacterium]_AB557582 [II-CFB-Flavobacterium] SA444_Flavobacterium_AB557582 gi|376317498|gb|AB557582| Flavobacterium sp SA444 PR gene for proteorhodopsin, partial cds Flavobacterium sp SA444 PR gene for proteorhodopsin, partial cds AB557582 [[proteorhodopsin super-cluster II/CFB-like cluster/Flavobacterium-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Flavobacterium-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Flavobacterium] taxon:754406 genomic_DNA strain 03MAY2012 #na seawater Pacific Ocean marine 35 139.3333 Diversity and functional analysis of proteorhodopsin in marine Flavobacteria Yoshizawa,S., Kawanabe,A., Ito,H., Kandori,H. and Kogure,K. Environ. Microbiol. 14 (5), 12401248 (2012) 22329552 #na TTCTTTTTATCGCTGAGCCAGTTTGACAAAAAATGGCGCACTTCAGTGTTGGTTTCAGGTTTGATTACTTTTATTGCCGCAGTACATTATTTCTACATGAGAGATTATTGGGCAACTTTCGGTGAATCGCCTACTTTTTTCCGTTATGTTGACTGGGTATTGACGGTGCCATTAATGTGTCTTGAGTTTTATTTAATATTGAAAGTTGCAGGGGCTAAGCAGTCTTTGTTGTGGAAAATGATTATCTATTCTCTGATCATGTTAGTTACAGGTTATTTCGGTGAGGTCGTTGATCCTAGTAACGCAGCACTTTGGGGATTCGCTTCAGGAGTTGCTTATTTCTTAATTGTTTATGAAATATGGATTGGTGAGGCTGCTAAATTGGCCAAAGCTGCCGGTGGAAACACACTTGCTGCACACAAAATA FFLSLSQFDKKWRTSVLVSGLITFIAAVHYFYMRDYWATFGESPTFFRYVDWVLTVPLMCLEFYLILKVAGAKQSLLWKMIIYSLIMLVTGYFGEVVDPSNAALWGFASGVAYFLIVYEIWIGEAAKLAKAAGGNTLAAHKI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTTTATCGCTGAGCCAGTTTGACAAAAAATGGCGCACTTCAGTGTTGGTTTCAGGTTTGATTACTTTTATTGCCGCAGTACATTATTTCTACATGAGAGATTATTGGGCA---------------------------------------------------ACTTTCGGTGAATCGCCTACTTTTTTCCGTTATGTTGACTGG------------------------GTATTGACGGTGCCATTAATGTGTCTTGAGTTTTATTTAATATTGAAAGTT---------GCA------GGGGCTAAGCAG---TCTTTG------------------------------------TTGTGGAAA---ATGATTATCTATTCTCTGATCATGTTAGTTACAGGTTATTTCGGTGAG---------GTC------------------GTT------GATCCT------------------------------------------------------------------------------------------------AGTAACGCA------------------GCACTTTGG---GGATTCGCTTCAGGAGTTGCTTATTTCTTAATTGTTTATGAAATA---------------TGG------ATT---GGTGAGGCTGCTAAATTGGCCAAAGCT------GCC---GGTGGAAAC---ACA---CTT---GCT---GCA---CAC---AAA---ATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------FFLSLSQFDKKWRTSVLVSGLITFIAAVHYFYMRDYWA-----------------TFGESPTFFRYVDW--------VLTVPLMCLEFYLILKV---A--GAKQ-SL------------LWK-MIIYSLIMLVTGYFGE---V------V--DP--------------------------------SNA------ALW-GFASGVAYFLIVYEI-----W--I-GEAAKLAKA--A-GGN-T-L-A-A-H-K-I---------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Flavobacterium]_AB557584 [II-CFB-Flavobacterium] SA48_Flavobacterium_AB557584 gi|376317502|gb|AB557584| Flavobacterium sp SA48 PR gene for proteorhodopsin, partial cds Flavobacterium sp SA48 PR gene for proteorhodopsin, partial cds AB557584 [[proteorhodopsin super-cluster II/CFB-like cluster/Flavobacterium-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Flavobacterium-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Flavobacterium] taxon:754399 genomic_DNA strain 03MAY2012 #na sea_ice Pacific Ocean marine 35 139.3333 Diversity and functional analysis of proteorhodopsin in marine Flavobacteria Yoshizawa,S., Kawanabe,A., Ito,H., Kandori,H. and Kogure,K. Environ. Microbiol. 14 (5), 12401248 (2012) 22329552 #na TTCTTTTTATCGCTGAGCCAGTTTGACAAAAAATGGCGTACTTCAGTGTTGGTTTCAGGTTTGATTACTTTTATTGCCGCAGTACATTATTTCTACATGAGAGATTATTGGGCAAGTTTCGGTGAATCGCCTACTTTTTTCCGTTATGTTGACTGGGTATTGACGGTGCCATTAATGTGTCTTGAGTTTTACTTAATATTGAAAGTTGCAGGGGCTAAGCAGTCTTTGTTATGGAAAATGATTATCTATTCTCTTATCATGTTAGTTACAGGTTATTTCGGTGAGGTCGTTGATCCTAGTAACGCAGCACTTTGGGGATTCGCTTCAGGAGTTGCTTATTTCTTAATTGTTTATGAAATATGGATTGGTGAGGCTGCTAAATTGGCCAAAGCTGCCGGTGGAAACACACTTGCTGCACACAAAATA FFLSLSQFDKKWRTSVLVSGLITFIAAVHYFYMRDYWASFGESPTFFRYVDWVLTVPLMCLEFYLILKVAGAKQSLLWKMIIYSLIMLVTGYFGEVVDPSNAALWGFASGVAYFLIVYEIWIGEAAKLAKAAGGNTLAAHKI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTTTATCGCTGAGCCAGTTTGACAAAAAATGGCGTACTTCAGTGTTGGTTTCAGGTTTGATTACTTTTATTGCCGCAGTACATTATTTCTACATGAGAGATTATTGGGCA---------------------------------------------------AGTTTCGGTGAATCGCCTACTTTTTTCCGTTATGTTGACTGG------------------------GTATTGACGGTGCCATTAATGTGTCTTGAGTTTTACTTAATATTGAAAGTT---------GCA------GGGGCTAAGCAG---TCTTTG------------------------------------TTATGGAAA---ATGATTATCTATTCTCTTATCATGTTAGTTACAGGTTATTTCGGTGAG---------GTC------------------GTT------GATCCT------------------------------------------------------------------------------------------------AGTAACGCA------------------GCACTTTGG---GGATTCGCTTCAGGAGTTGCTTATTTCTTAATTGTTTATGAAATA---------------TGG------ATT---GGTGAGGCTGCTAAATTGGCCAAAGCT------GCC---GGTGGAAAC---ACA---CTT---GCT---GCA---CAC---AAA---ATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------FFLSLSQFDKKWRTSVLVSGLITFIAAVHYFYMRDYWA-----------------SFGESPTFFRYVDW--------VLTVPLMCLEFYLILKV---A--GAKQ-SL------------LWK-MIIYSLIMLVTGYFGE---V------V--DP--------------------------------SNA------ALW-GFASGVAYFLIVYEI-----W--I-GEAAKLAKA--A-GGN-T-L-A-A-H-K-I---------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Flavobacterium]_AB557579 [II-CFB-Flavobacterium] SA423_Flavobacterium_AB557579 gi|376317492|gb|AB557579| Flavobacterium sp SA423 PR gene for proteorhodopsin, partial cds Flavobacterium sp SA423 PR gene for proteorhodopsin, partial cds AB557579 [[proteorhodopsin super-cluster II/CFB-like cluster/Flavobacterium-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Flavobacterium-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Flavobacterium] taxon:754403 genomic_DNA strain 03MAY2012 #na sea_ice Pacific Ocean marine 35 139.3333 Diversity and functional analysis of proteorhodopsin in marine Flavobacteria Yoshizawa,S., Kawanabe,A., Ito,H., Kandori,H. and Kogure,K. Environ. Microbiol. 14 (5), 12401248 (2012) 22329552 #na GCATCTGCATTTTTCTTTTTATCGCTGAGCCAGTTTGACAAAAAATGGCGTACTTCAGTGTTGGTTTCAGGTTTGATTACTTTTATTGCCGCAGTACATTATTTCTACATGAGAGATTATTGGGCAAGTTTCGGTGAATCGCCTACTTTTTTCCGTTATGTTGACTGGGTATTGACGGTGCCATTAATGTGTCTTGAGTTTTACTTAATATTGAAAGTTGCAGGGGCTAAGCAGTCTTTGTTATGGAAAATGATTATCTATTCTCTTATAATGTTAGTTACAGGTTATTTCGGTGAGGTCGTTGATCCTAGTAACGCAGCACTTTGGGGATTCGCTTCAGGAGTTGCTTATTTCTTAATTGTTTATGAAATATGGATTGGTGAGGCTGCTAAATTGGCCAAAGCTGCCGGTGGAAACACACTTGCTGCGCACAAAATA ASAFFFLSLSQFDKKWRTSVLVSGLITFIAAVHYFYMRDYWASFGESPTFFRYVDWVLTVPLMCLEFYLILKVAGAKQSLLWKMIIYSLIMLVTGYFGEVVDPSNAALWGFASGVAYFLIVYEIWIGEAAKLAKAAGGNTLAAHKI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATCTGCATTTTTCTTTTTATCGCTGAGCCAGTTTGACAAAAAATGGCGTACTTCAGTGTTGGTTTCAGGTTTGATTACTTTTATTGCCGCAGTACATTATTTCTACATGAGAGATTATTGGGCA---------------------------------------------------AGTTTCGGTGAATCGCCTACTTTTTTCCGTTATGTTGACTGG------------------------GTATTGACGGTGCCATTAATGTGTCTTGAGTTTTACTTAATATTGAAAGTT---------GCA------GGGGCTAAGCAG---TCTTTG------------------------------------TTATGGAAA---ATGATTATCTATTCTCTTATAATGTTAGTTACAGGTTATTTCGGTGAG---------GTC------------------GTT------GATCCT------------------------------------------------------------------------------------------------AGTAACGCA------------------GCACTTTGG---GGATTCGCTTCAGGAGTTGCTTATTTCTTAATTGTTTATGAAATA---------------TGG------ATT---GGTGAGGCTGCTAAATTGGCCAAAGCT------GCC---GGTGGAAAC---ACA---CTT---GCT---GCG---CAC---AAA---ATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------ASAFFFLSLSQFDKKWRTSVLVSGLITFIAAVHYFYMRDYWA-----------------SFGESPTFFRYVDW--------VLTVPLMCLEFYLILKV---A--GAKQ-SL------------LWK-MIIYSLIMLVTGYFGE---V------V--DP--------------------------------SNA------ALW-GFASGVAYFLIVYEI-----W--I-GEAAKLAKA--A-GGN-T-L-A-A-H-K-I---------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Flavobacterium]_AB557585 [II-CFB-Flavobacterium] SA449_Flavobacterium_AB557585 gi|376317504|gb|AB557585| Flavobacterium sp SA449 PR gene for proteorhodopsin, partial cds Flavobacterium sp SA449 PR gene for proteorhodopsin, partial cds AB557585 [[proteorhodopsin super-cluster II/CFB-like cluster/Flavobacterium-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Flavobacterium-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Flavobacterium] taxon:754407 genomic_DNA strain 03MAY2012 #na seawater Pacific Ocean marine 35 139.3333 Diversity and functional analysis of proteorhodopsin in marine Flavobacteria Yoshizawa,S., Kawanabe,A., Ito,H., Kandori,H. and Kogure,K. Environ. Microbiol. 14 (5), 12401248 (2012) 22329552 #na TTCTTTTTATCGCTGAGCCAGTTTGACAAAAAATGGCGTACTTCAGTGTTGGTTTCAGGTTTGATTACTTTTATTGCCGCAGTACATTATTTCTACATGAGAGATTATTGGGCAAGTTTCGGTGAATCGCCTACTTTTTTCCGTTATGTTGACTGGGTATTGACGGTGCCATTAATGTGTCTTGAGTTTTACTTAATATTGAAAGTTGCAGGGGCTAAGCAGTCTTTGTTATGGAAAATGATTATCTATTCTCTTATAATGTTAGTTACAGGTTATTTCGGTGAGGTCGTTGATCCTAGTAACGCAGCACTTTGGGGATTCGCTTCAGGAGTTGCTTATTTCTTAATTGTTTATGAAATATGGATTGGTGAGGCTGCTAAATTGGCCAAAGCTGCCGGTGGAAACACACTTGCTGCGCACAAAATA FFLSLSQFDKKWRTSVLVSGLITFIAAVHYFYMRDYWASFGESPTFFRYVDWVLTVPLMCLEFYLILKVAGAKQSLLWKMIIYSLIMLVTGYFGEVVDPSNAALWGFASGVAYFLIVYEIWIGEAAKLAKAAGGNTLAAHKI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTTTATCGCTGAGCCAGTTTGACAAAAAATGGCGTACTTCAGTGTTGGTTTCAGGTTTGATTACTTTTATTGCCGCAGTACATTATTTCTACATGAGAGATTATTGGGCA---------------------------------------------------AGTTTCGGTGAATCGCCTACTTTTTTCCGTTATGTTGACTGG------------------------GTATTGACGGTGCCATTAATGTGTCTTGAGTTTTACTTAATATTGAAAGTT---------GCA------GGGGCTAAGCAG---TCTTTG------------------------------------TTATGGAAA---ATGATTATCTATTCTCTTATAATGTTAGTTACAGGTTATTTCGGTGAG---------GTC------------------GTT------GATCCT------------------------------------------------------------------------------------------------AGTAACGCA------------------GCACTTTGG---GGATTCGCTTCAGGAGTTGCTTATTTCTTAATTGTTTATGAAATA---------------TGG------ATT---GGTGAGGCTGCTAAATTGGCCAAAGCT------GCC---GGTGGAAAC---ACA---CTT---GCT---GCG---CAC---AAA---ATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------FFLSLSQFDKKWRTSVLVSGLITFIAAVHYFYMRDYWA-----------------SFGESPTFFRYVDW--------VLTVPLMCLEFYLILKV---A--GAKQ-SL------------LWK-MIIYSLIMLVTGYFGE---V------V--DP--------------------------------SNA------ALW-GFASGVAYFLIVYEI-----W--I-GEAAKLAKA--A-GGN-T-L-A-A-H-K-I---------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Flavobacterium]_AB557578 [II-CFB-Flavobacterium] SA420_Flavobacterium_AB557578 gi|376317490|gb|AB557578| Flavobacterium sp SA420 PR gene for proteorhodopsin, partial cds Flavobacterium sp SA420 PR gene for proteorhodopsin, partial cds AB557578 [[proteorhodopsin super-cluster II/CFB-like cluster/Flavobacterium-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Flavobacterium-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Flavobacterium] taxon:754402 genomic_DNA strain 03MAY2012 #na sea_ice Pacific Ocean marine 35 139.3333 Diversity and functional analysis of proteorhodopsin in marine Flavobacteria Yoshizawa,S., Kawanabe,A., Ito,H., Kandori,H. and Kogure,K. Environ. Microbiol. 14 (5), 12401248 (2012) 22329552 #na TTCTTTTTATCGCTGAGCCAGTTTGACAAAAAATGGCGTACTTCAGTGTTGGTTTCAGGTTTGATTACTTTTATTGCTGCCGTACATTATTTCTACATGAGAGATTATTGGGCAACTTTTGGTGAATCGCCTACTTTTTTCCGTTATGTTGACTGGGTACTGACGGTGCCATTAATGTGTCTTGAGTTTTACTTAATATTGAAAGTTGCAGGGGCTAAGCAGTCTTTGTTATGGAAAATGATTATCTATTCTCTTATCATGTTAGTTACAGGTTATTTTGGTGAGGTCGTTGATCCTAGTAACGCAGCACTTTGGGGATTCGCTTCAGGAGTTGCTTATTTCTTAATTGTTTATGAAATATGGATTGGTGAGGCTGCTAAATTGGCCAAAGCTGCTGGTGGAAACACACTTGCTGCACACAAAATA FFLSLSQFDKKWRTSVLVSGLITFIAAVHYFYMRDYWATFGESPTFFRYVDWVLTVPLMCLEFYLILKVAGAKQSLLWKMIIYSLIMLVTGYFGEVVDPSNAALWGFASGVAYFLIVYEIWIGEAAKLAKAAGGNTLAAHKI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTTTATCGCTGAGCCAGTTTGACAAAAAATGGCGTACTTCAGTGTTGGTTTCAGGTTTGATTACTTTTATTGCTGCCGTACATTATTTCTACATGAGAGATTATTGGGCA---------------------------------------------------ACTTTTGGTGAATCGCCTACTTTTTTCCGTTATGTTGACTGG------------------------GTACTGACGGTGCCATTAATGTGTCTTGAGTTTTACTTAATATTGAAAGTT---------GCA------GGGGCTAAGCAG---TCTTTG------------------------------------TTATGGAAA---ATGATTATCTATTCTCTTATCATGTTAGTTACAGGTTATTTTGGTGAG---------GTC------------------GTT------GATCCT------------------------------------------------------------------------------------------------AGTAACGCA------------------GCACTTTGG---GGATTCGCTTCAGGAGTTGCTTATTTCTTAATTGTTTATGAAATA---------------TGG------ATT---GGTGAGGCTGCTAAATTGGCCAAAGCT------GCT---GGTGGAAAC---ACA---CTT---GCT---GCA---CAC---AAA---ATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------FFLSLSQFDKKWRTSVLVSGLITFIAAVHYFYMRDYWA-----------------TFGESPTFFRYVDW--------VLTVPLMCLEFYLILKV---A--GAKQ-SL------------LWK-MIIYSLIMLVTGYFGE---V------V--DP--------------------------------SNA------ALW-GFASGVAYFLIVYEI-----W--I-GEAAKLAKA--A-GGN-T-L-A-A-H-K-I---------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Flavobacterium]_JX863338 [II-CFB-Flavobacterium] RCC2399_Flavobacterium_JX863338 gi|425477626|gb|JX863338| Flavobacterium sp RCC2399 putative proteorhodopsin gene, partial cds Flavobacterium sp RCC2399 putative proteorhodopsin gene, partial cds JX863338 [[proteorhodopsin super-cluster II/CFB-like cluster/Flavobacterium-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Flavobacterium-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Flavobacterium] taxon:1262150 genomic_DNA strain 01-DEC-2012 23Aug2009 55m_depth Arctic Ocean marine 71.76 -130.83 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGGTATTGACGGTGCCATTAATGTGTCTTGAGTTTTACTTAATCTTGAAAGTTGCAGGGGCTAAGCAGTCTTTGTTATGGAAAATGATTATCTACTCTCTTGTCATGTTAGTTACAGGTTATTGGGGTGAGGTTGTTGATCCTGGTAACGCAGCAGCATGGGGATTCGCCTCAGGTGTTGCTTATTTCTTAATTGTTTATGAAATATGGATTGGTGAGGCTGCTAAATTGGCAAAATCTGCCGGTGGAAACACACTTGCTGCACACAAAATACTATGTTGGTTCGTACTTGTA WVLTVPLMCLEFYLILKVAGAKQSLLWKMIIYSLVMLVTGYWGEVVDPGNAAAWGFASGVAYFLIVYEIWIGEAAKLAKSAGGNTLAAHKILCWFVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------GTATTGACGGTGCCATTAATGTGTCTTGAGTTTTACTTAATCTTGAAAGTT---------GCA------GGGGCTAAGCAG---TCTTTG------------------------------------TTATGGAAA---ATGATTATCTACTCTCTTGTCATGTTAGTTACAGGTTATTGGGGTGAG---------GTT------------------GTT------GATCCT------------------------------------------------------------------------------------------------GGTAACGCA------------------GCAGCATGG---GGATTCGCCTCAGGTGTTGCTTATTTCTTAATTGTTTATGAAATA---------------TGG------ATT---GGTGAGGCTGCTAAATTGGCAAAATCT------GCC---GGTGGAAAC---ACA---CTT---GCT---GCA---CAC---AAA---ATACTA---TGTTGGTTCGTACTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------VLTVPLMCLEFYLILKV---A--GAKQ-SL------------LWK-MIIYSLVMLVTGYWGE---V------V--DP--------------------------------GNA------AAW-GFASGVAYFLIVYEI-----W--I-GEAAKLAKS--A-GGN-T-L-A-A-H-K-IL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Flavobacterium]_JX863337 [II-CFB-Flavobacterium] RCC2394_Flavobacterium_JX863337 gi|425477624|gb|JX863337| Flavobacterium sp RCC2394 putative proteorhodopsin gene, partial cds Flavobacterium sp RCC2394 putative proteorhodopsin gene, partial cds JX863337 [[proteorhodopsin super-cluster II/CFB-like cluster/Flavobacterium-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Flavobacterium-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Flavobacterium] taxon:1262147 genomic_DNA strain 01-DEC-2012 12Aug2009 3m_depth Arctic Ocean marine 70.54 -140.78 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGGTATTGACGGTGCCATTAATGTGTCTTGAGTTTTACTTAATATTAAAAGTTGCAGGGGCTAAGCAGTCTTTGTTATGGAAAATGATTATCTATTCTCTTGTGATGCTAGTTACAGGTTATTGGGGTGAGGTTGTTGATCCTGGTAACGCAGCAGCATGGGGATTCGCCTCAGGTGTTGCTTATTTCTTAATTGTTTATGAAATATGGATTGGTGAGGCTGCAAAATTGGCAAAAGCTGCCGGTGGAAACACACTTGCTGCACACAAAATACTATGTTGGTTCGTACTTGTA WVLTVPLMCLEFYLILKVAGAKQSLLWKMIIYSLVMLVTGYWGEVVDPGNAAAWGFASGVAYFLIVYEIWIGEAAKLAKAAGGNTLAAHKILCWFVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------GTATTGACGGTGCCATTAATGTGTCTTGAGTTTTACTTAATATTAAAAGTT---------GCA------GGGGCTAAGCAG---TCTTTG------------------------------------TTATGGAAA---ATGATTATCTATTCTCTTGTGATGCTAGTTACAGGTTATTGGGGTGAG---------GTT------------------GTT------GATCCT------------------------------------------------------------------------------------------------GGTAACGCA------------------GCAGCATGG---GGATTCGCCTCAGGTGTTGCTTATTTCTTAATTGTTTATGAAATA---------------TGG------ATT---GGTGAGGCTGCAAAATTGGCAAAAGCT------GCC---GGTGGAAAC---ACA---CTT---GCT---GCA---CAC---AAA---ATACTA---TGTTGGTTCGTACTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------VLTVPLMCLEFYLILKV---A--GAKQ-SL------------LWK-MIIYSLVMLVTGYWGE---V------V--DP--------------------------------GNA------AAW-GFASGVAYFLIVYEI-----W--I-GEAAKLAKA--A-GGN-T-L-A-A-H-K-IL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Flavobacterium]_JX863335 [II-CFB-Flavobacterium] RCC2396_Flavobacterium_JX863335 gi|425477620|gb|JX863335| Flavobacterium sp RCC2396 putative proteorhodopsin gene, partial cds Flavobacterium sp RCC2396 putative proteorhodopsin gene, partial cds JX863335 [[proteorhodopsin super-cluster II/CFB-like cluster/Flavobacterium-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Flavobacterium-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Flavobacterium] taxon:1262148 genomic_DNA strain 01-DEC-2012 18Aug2009 3m_depth Arctic Ocean marine 71.22 -136.71 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGGTATTGACGGTGCCATTAATGTGTCTTGAGTTTTACTTAATATTAAAAGTTGCAGGGGCTAAGCAGTCTTTGTTATGGAAAATGATTATCTATTCTCTTGTCATGTTAGTTACAGGCTATTGGGGTGAGGTCGTTGATCCTAGTAACGCAGCTCTTTGGGGATTCTTTTCAGGTGTTGCTTATTTCTTAATTGTTTATGAAATTTGGATTGGTGAGGCTGCTAAATTGGCCAAAGCTGCCGGCGGAAACACACTTGCTGCACACAAAATACTATGTTGGTTTGTACTTGTA WVLTVPLMCLEFYLILKVAGAKQSLLWKMIIYSLVMLVTGYWGEVVDPSNAALWGFFSGVAYFLIVYEIWIGEAAKLAKAAGGNTLAAHKILCWFVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------GTATTGACGGTGCCATTAATGTGTCTTGAGTTTTACTTAATATTAAAAGTT---------GCA------GGGGCTAAGCAG---TCTTTG------------------------------------TTATGGAAA---ATGATTATCTATTCTCTTGTCATGTTAGTTACAGGCTATTGGGGTGAG---------GTC------------------GTT------GATCCT------------------------------------------------------------------------------------------------AGTAACGCA------------------GCTCTTTGG---GGATTCTTTTCAGGTGTTGCTTATTTCTTAATTGTTTATGAAATT---------------TGG------ATT---GGTGAGGCTGCTAAATTGGCCAAAGCT------GCC---GGCGGAAAC---ACA---CTT---GCT---GCA---CAC---AAA---ATACTA---TGTTGGTTTGTACTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------VLTVPLMCLEFYLILKV---A--GAKQ-SL------------LWK-MIIYSLVMLVTGYWGE---V------V--DP--------------------------------SNA------ALW-GFFSGVAYFLIVYEI-----W--I-GEAAKLAKA--A-GGN-T-L-A-A-H-K-IL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Flavobacterium]_JX863334 [II-CFB-Flavobacterium] RCC2393_Flavobacterium_JX863334 gi|425477618|gb|JX863334| Flavobacterium sp RCC2393 putative proteorhodopsin gene, partial cds Flavobacterium sp RCC2393 putative proteorhodopsin gene, partial cds JX863334 [[proteorhodopsin super-cluster II/CFB-like cluster/Flavobacterium-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Flavobacterium-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Flavobacterium] taxon:1262146 genomic_DNA strain 01-DEC-2012 09Aug2009 3m_depth Arctic Ocean marine 71.57 -133.94 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGGTATTGACGGTACCATTGATGTGTCTTGAGTTTTACTTAATATTGAAAGTTGCAGGGGCTAAGCAGTCTTTGTTATGGAAAATGATAGTGTATTCTCTTATCATGTTGGTAACAGGTTACTTTGGAGAGGTTGTAGATCCAAGTAATGCTGCACTTTGGGGATTTGCTTCAGGAGCTGCTTATTTCTTAATTGTTTATGAAATATGGATTGGTGAGGCTGCTAAATTGGCTAAAGCTGCCGGTGGAAACACACTTGCTGCACACAAAATACTATGTTGGTTTGTACTTGTA WVLTVPLMCLEFYLILKVAGAKQSLLWKMIVYSLIMLVTGYFGEVVDPSNAALWGFASGAAYFLIVYEIWIGEAAKLAKAAGGNTLAAHKILCWFVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------GTATTGACGGTACCATTGATGTGTCTTGAGTTTTACTTAATATTGAAAGTT---------GCA------GGGGCTAAGCAG---TCTTTG------------------------------------TTATGGAAA---ATGATAGTGTATTCTCTTATCATGTTGGTAACAGGTTACTTTGGAGAG---------GTT------------------GTA------GATCCA------------------------------------------------------------------------------------------------AGTAATGCT------------------GCACTTTGG---GGATTTGCTTCAGGAGCTGCTTATTTCTTAATTGTTTATGAAATA---------------TGG------ATT---GGTGAGGCTGCTAAATTGGCTAAAGCT------GCC---GGTGGAAAC---ACA---CTT---GCT---GCA---CAC---AAA---ATACTA---TGTTGGTTTGTACTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------VLTVPLMCLEFYLILKV---A--GAKQ-SL------------LWK-MIVYSLIMLVTGYFGE---V------V--DP--------------------------------SNA------ALW-GFASGAAYFLIVYEI-----W--I-GEAAKLAKA--A-GGN-T-L-A-A-H-K-IL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Flavobacterium]_JX863336 [II-CFB-Flavobacterium] RCC2392_Flavobacterium_JX863336 gi|425477622|gb|JX863336| Flavobacterium sp RCC2392 putative proteorhodopsin gene, partial cds Flavobacterium sp RCC2392 putative proteorhodopsin gene, partial cds JX863336 [[proteorhodopsin super-cluster II/CFB-like cluster/Flavobacterium-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Flavobacterium-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Flavobacterium] taxon:1262145 genomic_DNA strain 01-DEC-2012 09Aug2009 3m_depth Arctic Ocean marine 71.57 -133.94 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGGTATTGACGGTACCATTAATGTGTCTTGAGTTTTACTTAATATTGAAAGTTGCAGGGGCTAAGCAGTCTTTGTTATGGAAAATGATTGTGTATTCTCTTATAATGTTGGTAACAGGTTACTTTGGAGAGGTAGTAGATCCAAGTAATGCTGCACTTTGGGGATTTGCTTCAGGAGCTGCTTATTTCTTAATTGTTTATGAAATATGGATTGGTGAGGCTGCTAAATTGGCTAAAGCTGCAGGTGGAAACACACTTGCTGCACACAAAATACTATGTTGGTTTGTACTTGTA WVLTVPLMCLEFYLILKVAGAKQSLLWKMIVYSLIMLVTGYFGEVVDPSNAALWGFASGAAYFLIVYEIWIGEAAKLAKAAGGNTLAAHKILCWFVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------GTATTGACGGTACCATTAATGTGTCTTGAGTTTTACTTAATATTGAAAGTT---------GCA------GGGGCTAAGCAG---TCTTTG------------------------------------TTATGGAAA---ATGATTGTGTATTCTCTTATAATGTTGGTAACAGGTTACTTTGGAGAG---------GTA------------------GTA------GATCCA------------------------------------------------------------------------------------------------AGTAATGCT------------------GCACTTTGG---GGATTTGCTTCAGGAGCTGCTTATTTCTTAATTGTTTATGAAATA---------------TGG------ATT---GGTGAGGCTGCTAAATTGGCTAAAGCT------GCA---GGTGGAAAC---ACA---CTT---GCT---GCA---CAC---AAA---ATACTA---TGTTGGTTTGTACTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------VLTVPLMCLEFYLILKV---A--GAKQ-SL------------LWK-MIVYSLIMLVTGYFGE---V------V--DP--------------------------------SNA------ALW-GFASGAAYFLIVYEI-----W--I-GEAAKLAKA--A-GGN-T-L-A-A-H-K-IL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Flavobacterium]_AB557576 [II-CFB-Flavobacterium] SA415_Flavobacterium_AB557576 gi|376317486|gb|AB557576| Flavobacterium sp SA415 PR gene for proteorhodopsin, partial cds Flavobacterium sp SA415 PR gene for proteorhodopsin, partial cds AB557576 [[proteorhodopsin super-cluster II/CFB-like cluster/Flavobacterium-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Flavobacterium-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Flavobacterium] taxon:754400 genomic_DNA strain 03MAY2012 #na sea_ice Pacific Ocean marine 35 139.3333 Diversity and functional analysis of proteorhodopsin in marine Flavobacteria Yoshizawa,S., Kawanabe,A., Ito,H., Kandori,H. and Kogure,K. Environ. Microbiol. 14 (5), 12401248 (2012) 22329552 #na TTCTTTTTATCTTTAAGTCAGTTTGATAGAAAGTGGCGCACTTCAGTATTAGTTTCAGGTTTGATTACCTTTATTGCTGCGGTACATTATTTCTATATGAGGGATTATTGGGCTTCATTTGGAGAATCACCTACGTTCTTTCGTTATGTAGACTGGGTACTAACGGTGCCGCTAATGTGTTTAGAGTTTTACCTGATACTAAAAGTCGCAGGTGCAAAACAGTCTTTATTATGGAAAATGATTCTTTATTCTGTAGTAATGTTAGTTACAGGTTATTTAGGAGAAGTAGTTATGACAGATAGTGCTGCTTTTTGGGGATTCATCTCAGGAGTTGCCTATTTTGCTATTGTCTACGAAATTTGGTTAGGAGAAGCTTCAAAACTGGCTGCAGCAGCTGGTGGACAGATTCAGAAAGCACACAAAATT FFLSLSQFDRKWRTSVLVSGLITFIAAVHYFYMRDYWASFGESPTFFRYVDWVLTVPLMCLEFYLILKVAGAKQSLLWKMILYSVVMLVTGYLGEVVMTDSAAFWGFISGVAYFAIVYEIWLGEASKLAAAAGGQIQKAHKI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTTTATCTTTAAGTCAGTTTGATAGAAAGTGGCGCACTTCAGTATTAGTTTCAGGTTTGATTACCTTTATTGCTGCGGTACATTATTTCTATATGAGGGATTATTGGGCT---------------------------------------------------TCATTTGGAGAATCACCTACGTTCTTTCGTTATGTAGACTGG------------------------GTACTAACGGTGCCGCTAATGTGTTTAGAGTTTTACCTGATACTAAAAGTC---------GCA------GGTGCAAAACAG---TCTTTA------------------------------------TTATGGAAA---ATGATTCTTTATTCTGTAGTAATGTTAGTTACAGGTTATTTAGGAGAA---------GTA------------------GTT------ATGACA------------------------------------------------------------------------------------------------GATAGTGCT------------------GCTTTTTGG---GGATTCATCTCAGGAGTTGCCTATTTTGCTATTGTCTACGAAATT---------------TGG------TTA---GGAGAAGCTTCAAAACTGGCTGCAGCA------GCT---GGTGGACAG---ATT---CAG---AAA---GCA---CAC---AAA---ATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------FFLSLSQFDRKWRTSVLVSGLITFIAAVHYFYMRDYWA-----------------SFGESPTFFRYVDW--------VLTVPLMCLEFYLILKV---A--GAKQ-SL------------LWK-MILYSVVMLVTGYLGE---V------V--MT--------------------------------DSA------AFW-GFISGVAYFAIVYEI-----W--L-GEASKLAAA--A-GGQ-I-Q-K-A-H-K-I---------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Flavobacterium]_AB557581 [II-CFB-Flavobacterium] SA432_Flavobacterium_AB557581 gi|376317496|gb|AB557581| Flavobacterium sp SA432 PR gene for proteorhodopsin, partial cds Flavobacterium sp SA432 PR gene for proteorhodopsin, partial cds AB557581 [[proteorhodopsin super-cluster II/CFB-like cluster/Flavobacterium-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Flavobacterium-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Flavobacterium] taxon:754405 genomic_DNA strain 03MAY2012 #na seawater Pacific Ocean marine 35 139.3333 Diversity and functional analysis of proteorhodopsin in marine Flavobacteria Yoshizawa,S., Kawanabe,A., Ito,H., Kandori,H. and Kogure,K. Environ. Microbiol. 14 (5), 12401248 (2012) 22329552 #na TTCTTTTTATCTTTAAGCCAGTTTGATAAAAAGTGGCGTACTTCGGTATTGGTTTCAGGGTTAATTACCTTCATTGCTGCTGTACATTATTTCTACATGAGGGATTATTGGGCTTCATTTGGAGAATCACCCACGTTCTTTCGTTACGTAGACTGGGTACTAACTGTGCCGTTAATGTGTTTAGAGTTTTACCTGATACTAAAAGTAGCGGGAGCAAAACAGTCTTTATTATGGAAAATGATTCTTTATTCTGTGGTGATGTTAGTTACAGGTTACCTAGGAGAAGTAGTTATGACAGACAGTGCTGCTTTTTGGGGATTCATTTCCGGAGTTGCTTATTTTGCCATAGTGTATGAAATTTGGTTAGGAGAAGCTTCAAAACTTGCTGCATCAGCAGGTGGTCAGATTCAAAAAGCCCACAAAATT FFLSLSQFDKKWRTSVLVSGLITFIAAVHYFYMRDYWASFGESPTFFRYVDWVLTVPLMCLEFYLILKVAGAKQSLLWKMILYSVVMLVTGYLGEVVMTDSAAFWGFISGVAYFAIVYEIWLGEASKLAASAGGQIQKAHKI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTTTATCTTTAAGCCAGTTTGATAAAAAGTGGCGTACTTCGGTATTGGTTTCAGGGTTAATTACCTTCATTGCTGCTGTACATTATTTCTACATGAGGGATTATTGGGCT---------------------------------------------------TCATTTGGAGAATCACCCACGTTCTTTCGTTACGTAGACTGG------------------------GTACTAACTGTGCCGTTAATGTGTTTAGAGTTTTACCTGATACTAAAAGTA---------GCG------GGAGCAAAACAG---TCTTTA------------------------------------TTATGGAAA---ATGATTCTTTATTCTGTGGTGATGTTAGTTACAGGTTACCTAGGAGAA---------GTA------------------GTT------ATGACA------------------------------------------------------------------------------------------------GACAGTGCT------------------GCTTTTTGG---GGATTCATTTCCGGAGTTGCTTATTTTGCCATAGTGTATGAAATT---------------TGG------TTA---GGAGAAGCTTCAAAACTTGCTGCATCA------GCA---GGTGGTCAG---ATT---CAA---AAA---GCC---CAC---AAA---ATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------FFLSLSQFDKKWRTSVLVSGLITFIAAVHYFYMRDYWA-----------------SFGESPTFFRYVDW--------VLTVPLMCLEFYLILKV---A--GAKQ-SL------------LWK-MILYSVVMLVTGYLGE---V------V--MT--------------------------------DSA------AFW-GFISGVAYFAIVYEI-----W--L-GEASKLAAS--A-GGQ-I-Q-K-A-H-K-I---------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Flavobacterium]_AHKF01000018 [II-CFB-Flavobacterium] Flavobacteria_frigoris_PS1_66_18_genome_AHKF01000018 gi|379649540|gb|AHKF01000018| Flavobacterium frigoris PS1 66 18, whole genome shotgun sequence Flavobacterium frigoris PS1 66 18, whole genome shotgun sequence AHKF01000018 [[proteorhodopsin super-cluster II/CFB-like cluster/Flavobacterium-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Flavobacterium-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Flavobacterium] taxon:1086011 genomic_DNA strain 08-mars-12 03-janv-03 sea_ice Antarctic Ocean marine -77.849266 166.64886 Flavobacterium frigoris PS1, a freezetolerant bacterium from Antarctic sea ice Raymond,J. and Kim,H.J. Unpublished #na isolated from diatom layer ATGACAAAATTTATGTTTATTTCAGGTTTAGTTGGGAAATTATCGCCAACAGATTATGTAGGGTTTACGTTCTTTGTAGGGTGTATGGCTATGATGGCCGCATCAGCATTTTTCTTTTTGTCTTTAAGTCAGTTTGACAAAAAGTGGCGTACTTCAGTATTGGTTTCAGGACTAATCACTTTTATTGCTGCGGTGCATTATTTCTACATGAGAGATTATTGGGCTTCATTTGGTGAATCACCGACATTCTTTCGTTATGTAGACTGGGTTTTAACTGTACCGTTAATGTGTTTAGAATTTTATCTGATACTAAAAGTAGCAGGTGCAAAGCAGTCTTTATTATGGAAAATGATCATTTATTCTGTAATAATGTTAGTTACAGGTTACTTAGGTGAAGTAGTAATGAAAGATAGTGCTGCTTTTTGGGGATTCATTTCCGGAGTTGCTTATTTCTTTATTGTTTATGAAATTTGGTTAGGCCAAGCTTCAAAATTAGCTGCGGCAGCAGGTGGAGAAATTCAAAAAGCACATAAAATTTTGTGTTGGTTCGTACTTGTTGGATGGTCAATTTATCCATTAGGATATATGATGGGAACTACAGGCTGGTATAACGGAGTTATTCCTAGTGGTAATATCGATGTGGTTTATAACATTGCGGATGCGATTAATAAAATTGGATTTGGTTTAGTAATTTACAATTTAGCTGTTTCGTCGCAAAAAGAT MTKFMFISGLVGKLSPTDYVGFTFFVGCMAMMAASAFFFLSLSQFDKKWRTSVLVSGLITFIAAVHYFYMRDYWASFGESPTFFRYVDWVLTVPLMCLEFYLILKVAGAKQSLLWKMIIYSVIMLVTGYLGEVVMKDSAAFWGFISGVAYFFIVYEIWLGQASKLAAAAGGEIQKAHKILCWFVLVGWSIYPLGYMMGTTGWYNGVIPSGNIDVVYNIADAINKIGFGLVIYNLAVSSQKD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGACAAAATTTATGTTTATTTCAGGTTTAGTTGGGAAATTATCGCCAACAGATTATGTAGGGTTTACGTTCTTTGTAGGGTGTATGGCTATGATGGCCGCATCAGCATTTTTCTTTTTGTCTTTAAGTCAGTTTGACAAAAAGTGGCGTACTTCAGTATTGGTTTCAGGACTAATCACTTTTATTGCTGCGGTGCATTATTTCTACATGAGAGATTATTGGGCT---------------------------------------------------TCATTTGGTGAATCACCGACATTCTTTCGTTATGTAGACTGG------------------------GTTTTAACTGTACCGTTAATGTGTTTAGAATTTTATCTGATACTAAAAGTA---------GCA------GGTGCAAAGCAG---TCTTTA------------------------------------TTATGGAAA---ATGATCATTTATTCTGTAATAATGTTAGTTACAGGTTACTTAGGTGAA---------GTA------------------GTA------ATGAAA------------------------------------------------------------------------------------------------GATAGTGCT------------------GCTTTTTGG---GGATTCATTTCCGGAGTTGCTTATTTCTTTATTGTTTATGAAATT---------------TGG------TTA---GGCCAAGCTTCAAAATTAGCTGCGGCA------GCA---GGTGGAGAA---ATT---CAA---AAA---GCA---CAT---AAA---ATTTTG---TGTTGGTTCGTACTTGTT---------------------------------------------------------------GGATGG---------TCAATTTATCCATTAGGATATATGATGGGAACTACAGGC---TGGTAT---------AAC---GGAGTTATTCCTAGTGGTAAT---------------------ATCGATGTGGTTTATAACATTGCGGATGCGATTAATAAAATTGGATTTGGTTTAGTAATTTACAATTTAGCTGTTTCGTCGCAAAAAGAT--------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------MTKFMFISGLVGKLSPTDYVGFTFFVGCMAMMAASAFFFLSLSQFDKKWRTSVLVSGLITFIAAVHYFYMRDYWA-----------------SFGESPTFFRYVDW--------VLTVPLMCLEFYLILKV---A--GAKQ-SL------------LWK-MIIYSVIMLVTGYLGE---V------V--MK--------------------------------DSA------AFW-GFISGVAYFFIVYEI-----W--L-GQASKLAAA--A-GGE-I-Q-K-A-H-K-IL-CWFVLV---------------------GW---SIYPLGYMMGTTG-WY---N-GVIPSGN-------IDVVYNIADAINKIGFGLVIYNLAVSSQKD------------------------------------- [II-CFB-Flavobacterium]_JX312347 [II-CFB-Flavobacterium] Flavobacterium_sp_TAK-SED-38_JX312347 gi|404428501|gb|JX312347| Flavobacterium sp. TAK-SED-38 proteorhodpsin (PR) gene, partial cds. Flavobacterium sp. TAK-SED-38 proteorhodpsin (PR) gene, partial cds. JX312347 [[proteorhodopsin super-cluster II/CFB-like cluster/Flavobacterium-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Flavobacterium-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Flavobacterium] taxon:1221361 genomic DNA strain 30-sept-13 #na #na #na #na #na Phylogenetic characterization of culturable proteorhodopsin-bearing flavobacteria in marine sediments Li,N. and Kim,J.S. Unpublished #na #na ATGAGAGATTATTGGGCTTCATTTGGAGAATCGCCAACGTTCTTTAGATATGTGGATTGGGTATTAACTGTGCCTTTAATGTGTTTAGAGTTCTATTTAATTTTAAAAGTAGCTGGAGCGAAACAATCGCTATTATGGAAAATGGTTCTATATTCAATTGTAATGCTAGTTACAGGTTACTTTGGTGAAGTTGTATTCACTGACAGTGCTGCCTTATGGGGATTCATTTCGGGAGTTGCATATTTTGCAATTGTGTATGAA MRDYWASFGESPTFFRYVDWVLTVPLMCLEFYLILKVAGAKQSLLWKMVLYSIVMLVTGYFGEVVFTDSAALWGFISGVAYFAIVYE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAGAGATTATTGGGCT---------------------------------------------------TCATTTGGAGAATCGCCAACGTTCTTTAGATATGTGGATTGG------------------------GTATTAACTGTGCCTTTAATGTGTTTAGAGTTCTATTTAATTTTAAAAGTA---------GCT------GGAGCGAAACAA---TCGCTA------------------------------------TTATGGAAA---ATGGTTCTATATTCAATTGTAATGCTAGTTACAGGTTACTTTGGTGAA---------GTT------------------GTA------TTCACT------------------------------------------------------------------------------------------------GACAGTGCT------------------GCCTTATGG---GGATTCATTTCGGGAGTTGCATATTTTGCAATTGTGTATGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MRDYWA-----------------SFGESPTFFRYVDW--------VLTVPLMCLEFYLILKV---A--GAKQ-SL------------LWK-MVLYSIVMLVTGYFGE---V------V--FT--------------------------------DSA------ALW-GFISGVAYFAIVYE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Flavobacterium]_JX169795 [II-CFB-Flavobacterium] clone_pop6_JX169795 gi|430768653|gb|JX169795| Uncultured prokaryote clone pop6 rhodopsin gene, partial cds. Uncultured prokaryote clone pop6 rhodopsin gene, partial cds. JX169795 [[proteorhodopsin super-cluster II/CFB-like cluster/Flavobacterium-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Flavobacterium-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:198431 genomic DNA other 18-janv-13 26-nov-08 freshwater from Ganges River other freshwater 25.278395 83.016212 Characterization of the chimeric seven-transmembrane protein containing conserved region of helix C-F of microbial rhodopsin from Ganges River Choi,A.R., Kim,S.J., Jung,B.H. and Jung,K.H. Appl. Microbiol. Biotechnol. 97 (2), 819-828 (2013) 23151811 #na CTCCGTTATGTTGATTGGATTTTAACAGTTCCATTAATGTGTGTTGAGTTTTACTTAATCTTAAAAGTAGCAGGAGCAAAACAATCATTAATGTGGAAAATGATCATCTTATCTTTAGTAATGTTAGTTACTGGATATGCAGGAGAAACTATTGATCGTCCAAACGCATGGTTATGGGGGTTAATTTCAGGTATCGCTTATTTCGTAATTGTTTATGAAATTTGGTTAGGTGAAGCGTCTAAAATCGCTCAAGCTGCAGGTGGAAATGTATTATCTGCACACAAAATCTTATGCTGGTTCCTTCTAGTTGGTTGGGCGATTTACCCG LRYVDWILTVPLMCVEFYLILKVAGAKQSLMWKMIILSLVMLVTGYAGETIDRPNAWLWGLISGIAYFVIVYEIWLGEASKIAQAAGGNVLSAHKILCWFLLVGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCGTTATGTTGATTGG------------------------ATTTTAACAGTTCCATTAATGTGTGTTGAGTTTTACTTAATCTTAAAAGTA---------GCA------GGAGCAAAACAA---TCATTA------------------------------------ATGTGGAAA---ATGATCATCTTATCTTTAGTAATGTTAGTTACTGGATATGCAGGAGAA---------ACT------------------ATT------GATCGT------------------------------------------------------------------------------------------------CCAAACGCA------------------TGGTTATGG---GGGTTAATTTCAGGTATCGCTTATTTCGTAATTGTTTATGAAATT---------------TGG------TTA---GGTGAAGCGTCTAAAATCGCTCAAGCT------GCA---GGTGGAAAT---GTA---TTA---TCT---GCA---CAC---AAA---ATCTTA---TGCTGGTTCCTTCTAGTT---------------------------------------------------------------GGTTGG---------GCGATTTACCCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRYVDW--------ILTVPLMCVEFYLILKV---A--GAKQ-SL------------MWK-MIILSLVMLVTGYAGE---T------I--DR--------------------------------PNA------WLW-GLISGIAYFVIVYEI-----W--L-GEASKIAQA--A-GGN-V-L-S-A-H-K-IL-CWFLLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-CFB-Flavobacterium]_NZ_AAXX01000005 [II-CFB-Flavobacterium] Flavobacteria_BAL38_1101699887722_genome_NZ_AAXX01000005 gi|126663775|gb|NZ_AAXX01000005| Flavobacteria bacterium BAL38 1101699887722, whole genome shotgun sequence Flavobacteria bacterium BAL38 1101699887722, whole genome shotgun sequence NZ_AAXX01000005 [[proteorhodopsin super-cluster II/CFB-like cluster/Flavobacterium-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Flavobacterium-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales] taxon:391598 genomic_DNA strain 10-May-2013 #na #na Baltic Sea marine 63.51611 19.81583 Direct Submission Hagstrom,A., Ferriera,S., Johnson,J., Kravitz,S., Beeson,K., Sutton,G., Rogers,Y.H., Friedman,R., Frazier,M. and Venter,J.C. Submitted (05MAR2007) J Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA #na #na ATGACAAATTTAATGTTTCTATCATCTAGTGTAGCAAAAATGCTACCTAATGATTATGTGGGGTTTACATTTTTTATTGGAAGTATGGCTATGATGGCTGCTTCCGCTTTTTTCTTTTTATCATTAAATCAATTTGATAAAAAGTGGCGTACTTCAGTATTGGTTTCAGGTTTGATTACTTTTATTGCTGCCGTACATTATTTTTACATGCGTGATTATTGGAATGCTTTCCAAGAATCGCCAACTTTCTTTAGATATGTTGACTGGGTTTTAACTGTGCCGTTAATGTGTTTAGAATTTTATTTAATATTAAAAGTAGCTGGTGCTAAACAAAGTTTGTTGTGGAAAATGATTTTCTATTCAATCGTAATGTTAGTTACTGGATATTTTGGTGAAGCTGTTGACCCAACAAATGCATGGATTTGGGGATTAGTTTCTGGTATTGCTTATTTTGCAATTGCTTATGAAATTTGGTTAGGAGAAGCATCAAAATTAGCCAAAGCTGCTGGTGGAAACGTACTAGAAGCCCACAAAATTTTATGTTGGTTCGTTCTAGTTGGATGGGCAATTTATCCTTTAGGATACATGTTAGGTACTGATGGATGGTACACAGGTATTTTTGGTAAAGGAAATGTAGATATTGCTTACAATATAGCAGATGCTATAAACAAAATTGGATTTGGATTAGTAATTTACAATTTAGCTGTAAAATCTACTTCAAACCAACAAGAA MTNLMFLSSSVAKMLPNDYVGFTFFIGSMAMMAASAFFFLSLNQFDKKWRTSVLVSGLITFIAAVHYFYMRDYWNAFQESPTFFRYVDWVLTVPLMCLEFYLILKVAGAKQSLLWKMIFYSIVMLVTGYFGEAVDPTNAWIWGLVSGIAYFAIAYEIWLGEASKLAKAAGGNVLEAHKILCWFVLVGWAIYPLGYMLGTDGWYTGIFGKGNVDIAYNIADAINKIGFGLVIYNLAVKSTSNQQE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGACAAATTTAATGTTTCTATCATCTAGTGTAGCAAAAATGCTACCTAATGATTATGTGGGGTTTACATTTTTTATTGGAAGTATGGCTATGATGGCTGCTTCCGCTTTTTTCTTTTTATCATTAAATCAATTTGATAAAAAGTGGCGTACTTCAGTATTGGTTTCAGGTTTGATTACTTTTATTGCTGCCGTACATTATTTTTACATGCGTGATTATTGGAAT---------------------------------------------------GCTTTCCAAGAATCGCCAACTTTCTTTAGATATGTTGACTGG------------------------GTTTTAACTGTGCCGTTAATGTGTTTAGAATTTTATTTAATATTAAAAGTA---------GCT------GGTGCTAAACAA---AGTTTG------------------------------------TTGTGGAAA---ATGATTTTCTATTCAATCGTAATGTTAGTTACTGGATATTTTGGTGAA---------GCT------------------GTT------GACCCA------------------------------------------------------------------------------------------------ACAAATGCA------------------TGGATTTGG---GGATTAGTTTCTGGTATTGCTTATTTTGCAATTGCTTATGAAATT---------------TGG------TTA---GGAGAAGCATCAAAATTAGCCAAAGCT------GCT---GGTGGAAAC---GTA---CTA---GAA---GCC---CAC---AAA---ATTTTA---TGTTGGTTCGTTCTAGTT---------------------------------------------------------------GGATGG---------GCAATTTATCCTTTAGGATACATGTTAGGTACTGATGGA---TGGTAC---------ACA---GGTATTTTTGGTAAAGGAAAT---------------------GTAGATATTGCTTACAATATAGCAGATGCTATAAACAAAATTGGATTTGGATTAGTAATTTACAATTTAGCTGTAAAATCTACTTCAAACCAACAAGAA------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------MTNLMFLSSSVAKMLPNDYVGFTFFIGSMAMMAASAFFFLSLNQFDKKWRTSVLVSGLITFIAAVHYFYMRDYWN-----------------AFQESPTFFRYVDW--------VLTVPLMCLEFYLILKV---A--GAKQ-SL------------LWK-MIFYSIVMLVTGYFGE---A------V--DP--------------------------------TNA------WIW-GLVSGIAYFAIAYEI-----W--L-GEASKLAKA--A-GGN-V-L-E-A-H-K-IL-CWFVLV---------------------GW---AIYPLGYMLGTDG-WY---T-GIFGKGN-------VDIAYNIADAINKIGFGLVIYNLAVKSTSNQQE---------------------------------- [II-CFB-Psychroflexus]_JX863341 [II-CFB-Psychroflexus] RCC2388_Psychroflexus_JX863341 gi|425477632|gb|JX863341| Psychroflexus sp RCC2388 putative proteorhodopsin gene, partial cds Psychroflexus sp RCC2388 putative proteorhodopsin gene, partial cds JX863341 [[proteorhodopsin super-cluster II/CFB-like cluster/Psychroflexus-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Psychroflexus-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Psychroflexus] taxon:1262158 genomic_DNA strain 01-DEC-2012 06Aug2009 3m_depth Arctic Ocean marine 71.7 -126.48 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGGTTTTAACAGTACCACTTATGTGTGTCGAATTCTTCCTTCTCTTAAGAGTCGCTGGAGCAAAAGCTAGTCTAATGTGGAAATTGATTTTTTGGTCAGTTGTTATGTTCGTAACTGGTTACTTTGGTGAAGCTGTTCAACCAGATTACTCTTGGCAGTGGGGTCTTGCTTCAGGTATAGCTTACTTTGTTATTGTCTACATTGTCTGGGTTGGTGAAGCTAAGAAACTAGCAGTAAAAGCTGGTGGAGATGTTTTAAAAGCTCACAAAATTTTAGCTTGGTTCGTACTTGCA WVLTVPLMCVEFFLLLRVAGAKASLMWKLIFWSVVMFVTGYFGEAVQPDYSWQWGLASGIAYFVIVYIVWVGEAKKLAVKAGGDVLKAHKILAWFVLA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------GTTTTAACAGTACCACTTATGTGTGTCGAATTCTTCCTTCTCTTAAGAGTC---------GCT------GGAGCAAAAGCT---AGTCTA------------------------------------ATGTGGAAA---TTGATTTTTTGGTCAGTTGTTATGTTCGTAACTGGTTACTTTGGTGAA---------GCT------------------GTT------CAACCA------------------------------------------------------------------------------------------------GATTACTCT------------------TGGCAGTGG---GGTCTTGCTTCAGGTATAGCTTACTTTGTTATTGTCTACATTGTC---------------TGG------GTT---GGTGAAGCTAAGAAACTAGCAGTAAAA------GCT---GGTGGAGAT---GTT---TTA---AAA---GCT---CAC---AAA---ATTTTA---GCTTGGTTCGTACTTGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------VLTVPLMCVEFFLLLRV---A--GAKA-SL------------MWK-LIFWSVVMFVTGYFGE---A------V--QP--------------------------------DYS------WQW-GLASGIAYFVIVYIV-----W--V-GEAKKLAVK--A-GGD-V-L-K-A-H-K-IL-AWFVLA-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Psychroflexus]_JX863342 [II-CFB-Psychroflexus] RCC2407_Psychroflexus_JX863342 gi|425477634|gb|JX863342| Psychroflexus sp RCC2407 putative proteorhodopsin gene, partial cds Psychroflexus sp RCC2407 putative proteorhodopsin gene, partial cds JX863342 [[proteorhodopsin super-cluster II/CFB-like cluster/Psychroflexus-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Psychroflexus-like subcluster proteorhodopsin proton pump na ; na light-energy conversion (ion transport) unknown [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Psychroflexus] taxon:1262160 genomic_DNA strain 01-DEC-2012 06Aug2009 3m_depth Arctic Ocean marine 71.7 -126.48 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Lebaron,P. and Jeanthon,C. Unpublished #na #na CTTAGAGTCGCTGGAGCAAAAGCTAGTCTAATGTGGAAATTGATTTTTTGGTCAGTTGTTATGTTAGTAACTGGTTACTTTGGTGAAGCTGTTCAACCAGATTACTCTTGGCAGTGGGGTCTTGCTTCAGGTATAGCTTACTTTGTTATTGTCTACATTGTATGGGTTGGTGAAGCTAAGAAACTAGCAGTAAAAGCTGGTGGAGATGTTTTAAAAGCTCACAAAATTTTAGCTTGGTTCGTACTTGCA LRVAGAKASLMWKLIFWSVVMLVTGYFGEAVQPDYSWQWGLASGIAYFVIVYIVWVGEAKKLAVKAGGDVLKAHKILAWFVLA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTAGAGTC---------GCT------GGAGCAAAAGCT---AGTCTA------------------------------------ATGTGGAAA---TTGATTTTTTGGTCAGTTGTTATGTTAGTAACTGGTTACTTTGGTGAA---------GCT------------------GTT------CAACCA------------------------------------------------------------------------------------------------GATTACTCT------------------TGGCAGTGG---GGTCTTGCTTCAGGTATAGCTTACTTTGTTATTGTCTACATTGTA---------------TGG------GTT---GGTGAAGCTAAGAAACTAGCAGTAAAA------GCT---GGTGGAGAT---GTT---TTA---AAA---GCT---CAC---AAA---ATTTTA---GCTTGGTTCGTACTTGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRV---A--GAKA-SL------------MWK-LIFWSVVMLVTGYFGE---A------V--QP--------------------------------DYS------WQW-GLASGIAYFVIVYIV-----W--V-GEAKKLAVK--A-GGD-V-L-K-A-H-K-IL-AWFVLA-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Psychroflexus]_JX863340 [II-CFB-Psychroflexus] RCC2391_Psychroflexus_JX863340 gi|425477630|gb|JX863340| Psychroflexus sp RCC2391 putative proteorhodopsin gene, partial cds Psychroflexus sp RCC2391 putative proteorhodopsin gene, partial cds JX863340 [[proteorhodopsin super-cluster II/CFB-like cluster/Psychroflexus-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Psychroflexus-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Psychroflexus] taxon:1262159 genomic_DNA strain 01-DEC-2012 08Aug2009 3m_depth Arctic Ocean marine 70.4 -133.61 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGGTTTTAACAGTACCACTTATGTGTGTTGAATTCTTCCTTATCTTAAGAGTCGCTGGAGCAAAAGCTAGTCTAATGTGGAAATTGATTTTCTGGTCAGTGGTCATGTTAGTAACTGGTTACTTTGGTGAAGCTGTTCAACCAGATTACTCTTGGCAGTGGGGTCTTGCTTCAGGTATAGCTTACTTTGTTATTGTCTACATTGTATGGGTTGGTGAAGCTAAGAAACTAGCAGTAAAAGCTGGTGGAGATGTTTTAAAAGCTCACAAAATTTTAGCTTGGTTCGTACTTGCA WVLTVPLMCVEFFLILRVAGAKASLMWKLIFWSVVMLVTGYFGEAVQPDYSWQWGLASGIAYFVIVYIVWVGEAKKLAVKAGGDVLKAHKILAWFVLA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------GTTTTAACAGTACCACTTATGTGTGTTGAATTCTTCCTTATCTTAAGAGTC---------GCT------GGAGCAAAAGCT---AGTCTA------------------------------------ATGTGGAAA---TTGATTTTCTGGTCAGTGGTCATGTTAGTAACTGGTTACTTTGGTGAA---------GCT------------------GTT------CAACCA------------------------------------------------------------------------------------------------GATTACTCT------------------TGGCAGTGG---GGTCTTGCTTCAGGTATAGCTTACTTTGTTATTGTCTACATTGTA---------------TGG------GTT---GGTGAAGCTAAGAAACTAGCAGTAAAA------GCT---GGTGGAGAT---GTT---TTA---AAA---GCT---CAC---AAA---ATTTTA---GCTTGGTTCGTACTTGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------VLTVPLMCVEFFLILRV---A--GAKA-SL------------MWK-LIFWSVVMLVTGYFGE---A------V--QP--------------------------------DYS------WQW-GLASGIAYFVIVYIV-----W--V-GEAKKLAVK--A-GGD-V-L-K-A-H-K-IL-AWFVLA-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Psychroflexus]_NZ_AAPR01000007 [II-CFB-Psychroflexus] Psychroflexus_torquis_ATCC_700755_1100007023088_genome_NZ_AAPR01000007 gi|91216269|gb|NZ_AAPR01000007| Psychroflexus torquis ATCC 700755 1100007023088, whole genome shotgun sequence Psychroflexus torquis ATCC 700755 1100007023088, whole genome shotgun sequence NZ_AAPR01000007 [[proteorhodopsin super-cluster II/CFB-like cluster/Psychroflexus-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Psychroflexus-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Psychroflexus] #na genomic_DNA strain 28MAY2011 #na #na Antarctic Ocean marine -69 75 Direct Submission Bowman,J., Ferriera,S., Johnson,J., Kravitz,S., Halpern,A., Remington,K., Beeson,K., Tran,B., Rogers,Y.H., Friedman,R. and Venter,J.C. Submitted (17MAR2006) J Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA #na #na ATGGCCGACGTATCAAAGCTCGCAAATGACGACTACGTTGGTTTCACTTTTTTTGTAGGTAGTATGGCCATGTTGGCTGCATCTGCCTTCTTCTTTTTATCATTAAGTCAATTTGATAAAAAGTGGAGAACATCAGTATTAGTATCAGGTTTGATTACTTTTATTGCAGCAGTTCATTATTTCTATATGAGAGATTATTGGGATGCATTTGGAGAATCACCTACTTTCTTTAGATATGTAGACTGGGTTTTAACGGTACCACTTATGTGTGTTGAATTCTTCCTTATCTTAAGAGTGGCTGGAGCAAAAGCTAGTTTAATGTGGAAATTGATTTTCTGGTCAGTGGTTATGTTAGTAACTGGTTACTTTGGTGAAGCTGTTCAACCAGATTTCTCTTGGCAGTGGGGTCTTGCTTCAGGTATAGCTTACTTTGTTATTGTCTACATTGTATGGTTTGGTGAAGCTAAGAAACTAGCAGTATCAGCTGGTGGAGAAGTTTTAAAAGCTCACAACATTTTATGTTGGTTCGTACTTGTAGGATGGGCTATCTATCCTTTAGGATACATTTTAGGAACTCCAGGTGGATTATTTGGATTTGATTTTGGAGTAGACGCTTCATTTATGGATGTTGTTTATAACATTGGTGATGCTGTGAATAAAATTGGATTTGGATTAGTGATTTTTGCTTTGGCAACTAAATCTTCTGAA MADVSKLANDDYVGFTFFVGSMAMLAASAFFFLSLSQFDKKWRTSVLVSGLITFIAAVHYFYMRDYWDAFGESPTFFRYVDWVLTVPLMCVEFFLILRVAGAKASLMWKLIFWSVVMLVTGYFGEAVQPDFSWQWGLASGIAYFVIVYIVWFGEAKKLAVSAGGEVLKAHNILCWFVLVGWAIYPLGYILGTPGGLFGFDFGVDASFMDVVYNIGDAVNKIGFGLVIFALATKSSE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGCCGACGTATCAAAGCTCGCAAATGACGACTACGTTGGTTTCACTTTTTTTGTAGGTAGTATGGCCATGTTGGCTGCATCTGCCTTCTTCTTTTTATCATTAAGTCAATTTGATAAAAAGTGGAGAACATCAGTATTAGTATCAGGTTTGATTACTTTTATTGCAGCAGTTCATTATTTCTATATGAGAGATTATTGGGAT---------------------------------------------------GCATTTGGAGAATCACCTACTTTCTTTAGATATGTAGACTGG------------------------GTTTTAACGGTACCACTTATGTGTGTTGAATTCTTCCTTATCTTAAGAGTG---------GCT------GGAGCAAAAGCT---AGTTTA------------------------------------ATGTGGAAA---TTGATTTTCTGGTCAGTGGTTATGTTAGTAACTGGTTACTTTGGTGAA---------GCT------------------GTT------CAACCA------------------------------------------------------------------------------------------------GATTTCTCT------------------TGGCAGTGG---GGTCTTGCTTCAGGTATAGCTTACTTTGTTATTGTCTACATTGTA---------------TGG------TTT---GGTGAAGCTAAGAAACTAGCAGTATCA------GCT---GGTGGAGAA---GTT---TTA---AAA---GCT---CAC---AAC---ATTTTA---TGTTGGTTCGTACTTGTA---------------------------------------------------------------GGATGG---------GCTATCTATCCTTTAGGATACATTTTAGGAACTCCAGGT---GGATTA---------TTT---GGATTTGATTTTGGAGTAGAC------------GCTTCATTTATGGATGTTGTTTATAACATTGGTGATGCTGTGAATAAAATTGGATTTGGATTAGTGATTTTTGCTTTGGCAACTAAATCTTCTGAA------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------MADVSKLANDDYVGFTFFVGSMAMLAASAFFFLSLSQFDKKWRTSVLVSGLITFIAAVHYFYMRDYWD-----------------AFGESPTFFRYVDW--------VLTVPLMCVEFFLILRV---A--GAKA-SL------------MWK-LIFWSVVMLVTGYFGE---A------V--QP--------------------------------DFS------WQW-GLASGIAYFVIVYIV-----W--F-GEAKKLAVS--A-GGE-V-L-K-A-H-N-IL-CWFVLV---------------------GW---AIYPLGYILGTPG-GL---F-GFDFGVD----ASFMDVVYNIGDAVNKIGFGLVIFALATKSSE-------------------------------------- [II-CFB-Psychroflexus]_NZ_APLF01000002 [II-CFB-Psychroflexus] 489530960_54514_55245_Psychroflexus_gondwanensis_ACAM44_genome gi|489530960|gb|NZ_APLF01000002| Psychroflexus gondwanensis ACAM 44 pgond contig002, whole genome shotgun sequence Psychroflexus gondwanensis ACAM 44 pgond contig002, whole genome shotgun sequence NZ_APLF01000002 [[proteorhodopsin super-cluster II/CFB-like cluster/Psychroflexus-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Psychroflexus-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Psychroflexus] taxon:1189619 genomic_DNA strain 07MAY2013 #na #na Antarctic Ocean marine -68.450056 78.200083 #na #na #na #na #na ATGAGAACATTTATGTACTTTATGGCCGACGTTTCAAAGCTCGCTAATGACGACTACGTTGGTTTCACTTTTTTTGTAGGTAGTATGGCCATGTTGGCTGCATCTGCCTTTTTCTTTTTATCATTAAGTCAATTTGATAAAAAGTGGAGAACATCTGTATTAGTATCAGGTTTGATTACTTTTATTGCAGCAGTCCACTATTTCTACATGAGAGATTATTGGGATGCTTTTGGAGAATCACCTACATTCTTTAGATATGTAGACTGGGTTTTAACAGTACCACTTATGTGTGTTGAATTCTTCCTTATTTTAAGAGTAGCTGGTGCAAAAGCTAGCCTGATGTGGAAATTGATTTTCTGGTCAGTAGTGATGTTAGTAACAGGTTACTTTGGTGAAGCTGTTCAACCAGATTACTCTTGGCAGTGGGGTCTAGCTTCAGGTATAGCTTACTTTTTCATTGTCTACATTGTATGGTTTGGTGAAGCTAAGAAACTAGCAGTAAGTGCTGGTGGAGAAGTTTTAAAAGCTCACAACATTTTATGTTGGTTCGTACTTGTAGGATGGGCTATCTATCCTTTAGGTTACATCTTAGGAACTCCAGGTGGATTATTTGGATTTGACTTTGGTGTAGATGCTTCATTTATGGATGTTGTTTACAACATCGGTGATGCTGTGAATAAAATTGGATTTGGATTAGTGATTTTTGCTTTAGCAACTAAATCTTCACAA MRTFMYFMADVSKLANDDYVGFTFFVGSMAMLAASAFFFLSLSQFDKKWRTSVLVSGLITFIAAVHYFYMRDYWDAFGESPTFFRYVDWVLTVPLMCVEFFLILRVAGAKASLMWKLIFWSVVMLVTGYFGEAVQPDYSWQWGLASGIAYFFIVYIVWFGEAKKLAVSAGGEVLKAHNILCWFVLVGWAIYPLGYILGTPGGLFGFDFGVDASFMDVVYNIGDAVNKIGFGLVIFALATKSSQ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAGAACATTTATGTACTTTATGGCCGACGTTTCAAAGCTCGCTAATGACGACTACGTTGGTTTCACTTTTTTTGTAGGTAGTATGGCCATGTTGGCTGCATCTGCCTTTTTCTTTTTATCATTAAGTCAATTTGATAAAAAGTGGAGAACATCTGTATTAGTATCAGGTTTGATTACTTTTATTGCAGCAGTCCACTATTTCTACATGAGAGATTATTGGGAT---------------------------------------------------GCTTTTGGAGAATCACCTACATTCTTTAGATATGTAGACTGG------------------------GTTTTAACAGTACCACTTATGTGTGTTGAATTCTTCCTTATTTTAAGAGTA---------GCT------GGTGCAAAAGCT---AGCCTG------------------------------------ATGTGGAAA---TTGATTTTCTGGTCAGTAGTGATGTTAGTAACAGGTTACTTTGGTGAA---------GCT------------------GTT------CAACCA------------------------------------------------------------------------------------------------GATTACTCT------------------TGGCAGTGG---GGTCTAGCTTCAGGTATAGCTTACTTTTTCATTGTCTACATTGTA---------------TGG------TTT---GGTGAAGCTAAGAAACTAGCAGTAAGT------GCT---GGTGGAGAA---GTT---TTA---AAA---GCT---CAC---AAC---ATTTTA---TGTTGGTTCGTACTTGTA---------------------------------------------------------------GGATGG---------GCTATCTATCCTTTAGGTTACATCTTAGGAACTCCAGGT---GGATTA---------TTT---GGATTTGACTTTGGTGTAGAT------------GCTTCATTTATGGATGTTGTTTACAACATCGGTGATGCTGTGAATAAAATTGGATTTGGATTAGTGATTTTTGCTTTAGCAACTAAATCTTCACAA------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------MRTFMYFMADVSKLANDDYVGFTFFVGSMAMLAASAFFFLSLSQFDKKWRTSVLVSGLITFIAAVHYFYMRDYWD-----------------AFGESPTFFRYVDW--------VLTVPLMCVEFFLILRV---A--GAKA-SL------------MWK-LIFWSVVMLVTGYFGE---A------V--QP--------------------------------DYS------WQW-GLASGIAYFFIVYIV-----W--F-GEAKKLAVS--A-GGE-V-L-K-A-H-N-IL-CWFVLV---------------------GW---AIYPLGYILGTPG-GL---F-GFDFGVD----ASFMDVVYNIGDAVNKIGFGLVIFALATKSSQ-------------------------------------- [II-CFB-Psychroflexus]_NC_020156 [II-CFB-Psychroflexus] 443241923_339103_339864_Nonlabens_dokdonensis_DSW_6_proteorhodopsin_genome gi|443241923|gb|NC_020156| Nonlabens dokdonensis DSW6, complete genome Nonlabens dokdonensis DSW6, complete genome NC_020156 [[proteorhodopsin super-cluster II/CFB-like cluster/Psychroflexus-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Psychroflexus-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Nonlabens] taxon:592029 genomic_DNA strain 11-juin-13 #na #na Korean Sea marine 37.242752 131.870364 #na #na #na #na #na ATGAACTTTTTACTTTCAACACTTGAAGTGGCTAAAATGGCCACAGATGATTATGTAGGTTTTACATTTTTCATCGGGAGCATGGCCATGATGGCTGCAAGTGCTTTTTTCTTTTTGTCATTGAGTCAGTTTGACAACAAATGGCGTACCTCTGTATTAGTCTCTGGACTAATTACTTTCATAGCAGCGGTGCATTATTTTTACATGAGAGATTATTATGCTGCAACAGATAGCTCTCCAACTTTCTTCAGATATGTAGACTGGACTTTAACAGTACCGTTAATGTGTGTGGAATTCTATTTAATCCTTAAAGTAGCTGGTGCAAAACTAGGACTGATGTGGAAATTAATTTTCTGGTCTGTAGTAATGCTAGTAACAGGTTACTTTGGAGAAGTAATCGCATTAGGAAATCCTACCATGCAATGGGTTTGGGGTCTTGTTTCAGGAATCGCTTACTTCATTATAGTATACATGATATGGTTCGGTGAGGCAAAGAAACTCGCTACATCAGCAGGTGGAGCAGTTCTTAAAGCGCACAACATCTTATGTTGGTTTGTACTAGTAGGATGGGCCATCTATCCATTAGGATATATCCTTGGTACTGAAGGTGGATTATTCGGTTTACAACTAGTTGAAGATCCTAAAGCAGCACAAGAAGCAATGGACGTAGTTTACAACATTGGTGATGCAATCAACAAAATTGGATTTGGTCTAGTTATTTATAGTCTAGCTGTTACGTCTTCAAAAAAAGTTGAAGCT MNFLLSTLEVAKMATDDYVGFTFFIGSMAMMAASAFFFLSLSQFDNKWRTSVLVSGLITFIAAVHYFYMRDYYAATDSSPTFFRYVDWTLTVPLMCVEFYLILKVAGAKLGLMWKLIFWSVVMLVTGYFGEVIALGNPTMQWVWGLVSGIAYFIIVYMIWFGEAKKLATSAGGAVLKAHNILCWFVLVGWAIYPLGYILGTEGGLFGLQLVEDPKAAQEAMDVVYNIGDAINKIGFGLVIYSLAVTSSKKVEA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAACTTTTTACTTTCAACACTTGAAGTGGCTAAAATGGCCACAGATGATTATGTAGGTTTTACATTTTTCATCGGGAGCATGGCCATGATGGCTGCAAGTGCTTTTTTCTTTTTGTCATTGAGTCAGTTTGACAACAAATGGCGTACCTCTGTATTAGTCTCTGGACTAATTACTTTCATAGCAGCGGTGCATTATTTTTACATGAGAGATTATTATGCT---------------------------------------------------GCAACAGATAGCTCTCCAACTTTCTTCAGATATGTAGACTGG------------------------ACTTTAACAGTACCGTTAATGTGTGTGGAATTCTATTTAATCCTTAAAGTA---------GCT------GGTGCAAAACTA---GGACTG------------------------------------ATGTGGAAA---TTAATTTTCTGGTCTGTAGTAATGCTAGTAACAGGTTACTTTGGAGAA---------GTA------------------ATC------GCATTA---------------------------------------------------GGAAAT---------CCT---------------------------ACCATGCAA------------------TGGGTTTGG---GGTCTTGTTTCAGGAATCGCTTACTTCATTATAGTATACATGATA---------------TGG------TTC---GGTGAGGCAAAGAAACTCGCTACATCA------GCA---GGTGGAGCA---GTT---CTT---AAA---GCG---CAC---AAC---ATCTTA---TGTTGGTTTGTACTAGTA---------------------------------------------------------------GGATGG---------GCCATCTATCCATTAGGATATATCCTTGGTACTGAAGGT---GGATTA---------TTC---GGTTTACAACTAGTTGAAGATCCTAAAGCAGCACAAGAAGCAATGGACGTAGTTTACAACATTGGTGATGCAATCAACAAAATTGGATTTGGTCTAGTTATTTATAGTCTAGCTGTTACGTCTTCAAAAAAAGTTGAAGCT------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------MNFLLSTLEVAKMATDDYVGFTFFIGSMAMMAASAFFFLSLSQFDNKWRTSVLVSGLITFIAAVHYFYMRDYYA-----------------ATDSSPTFFRYVDW--------TLTVPLMCVEFYLILKV---A--GAKL-GL------------MWK-LIFWSVVMLVTGYFGE---V------I--AL-----------------GN---P---------TMQ------WVW-GLVSGIAYFIIVYMI-----W--F-GEAKKLATS--A-GGA-V-L-K-A-H-N-IL-CWFVLV---------------------GW---AIYPLGYILGTEG-GL---F-GLQLVEDPKAAQEAMDVVYNIGDAINKIGFGLVIYSLAVTSSKKVEA---------------------------------- [II-CFB-Psychroflexus]_JX312344 [II-CFB-Psychroflexus] Flavobacterium_sp_YIK-SED-11_JX312344 gi|404428495|gb|JX312344| Flavobacterium sp. YIK-SED-11 proteorhodpsin (PR) gene, partial cds. Flavobacterium sp. YIK-SED-11 proteorhodpsin (PR) gene, partial cds. JX312344 [[proteorhodopsin super-cluster II/CFB-like cluster/Psychroflexus-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Psychroflexus-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Flavobacterium] taxon:1221362 genomic DNA strain 30-sept-13 #na #na #na #na #na Phylogenetic characterization of culturable proteorhodopsin-bearing flavobacteria in marine sediments Li,N. and Kim,J.S. Unpublished #na #na TTGATCACCTTTATTGCAGCAGTACATTACTTCTACATGAGAGATTATTATGCCACGTTTGATGATTCCCCAACGTTCTTTAGATACGTTGACTGGGTATTGACCGTGCCGCTTATGTGTGTGGAGTTCTATCTTATCTTAAAGGTAGCCGGTGCAAAGGTAGGCTTGATGTGGAAGTTAATTTTCCTATCTGTAGTGATGCTGGTTACAGGATACTTTGGTGAGGTTGTAGCTTTAGGTAACCCTACTGGACAATGGATTTGGGGATTGATCTCTGGTATCGCATACTTTATGATCGTATATATTAT LITFIAAVHYFYMRDYYATFDDSPTFFRYVDWVLTVPLMCVEFYLILKVAGAKVGLMWKLIFLSVVMLVTGYFGEVVALGNPTGQWIWGLISGIAYFMIVYI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCTTTATTGCAGCAGTACATTACTTCTACATGAGAGATTATTATGCC---------------------------------------------------ACGTTTGATGATTCCCCAACGTTCTTTAGATACGTTGACTGG------------------------GTATTGACCGTGCCGCTTATGTGTGTGGAGTTCTATCTTATCTTAAAGGTA---------GCC------GGTGCAAAGGTA---GGCTTG------------------------------------ATGTGGAAG---TTAATTTTCCTATCTGTAGTGATGCTGGTTACAGGATACTTTGGTGAG---------GTT------------------GTA------GCTTTA---------------------------------------------------GGTAAC---------CCT---------------------------ACTGGACAA------------------TGGATTTGG---GGATTGATCTCTGGTATCGCATACTTTATGATCGTATATATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------LITFIAAVHYFYMRDYYA-----------------TFDDSPTFFRYVDW--------VLTVPLMCVEFYLILKV---A--GAKV-GL------------MWK-LIFLSVVMLVTGYFGE---V------V--AL-----------------GN---P---------TGQ------WIW-GLISGIAYFMIVYI--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Psychroflexus]_FJ560758 [II-CFB-Psychroflexus] HEL12_env_samples_FJ560758 gi|223868663|gb|FJ560758| Uncultured microorganism clone HEL12 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL12 putative proteorhodopsin gene, partial cds FJ560758 [[proteorhodopsin super-cluster II/CFB-like cluster/Psychroflexus-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Psychroflexus-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTACCATTAATGTGTGTTGAGTTCTATCTAATTTTAAAAGTTGCTGGAGCAACAAAGAGTATGATGTGGAAACTTATCTTCTGGTCAACTGTAATGTTAGTTACAGGTTTCTTTGGTGAGTACAATGATGGTTCTGCATTAGGATTAGGTCCTGCTTTATGGGGATTATTATCTGGTCTTGCGTACTTTTATATTGCTTACATGGTTTGGTTTGGAGAAGCTAAGAAACTTGCTGTATCAGCAGGTGGAGCAGTTGAAAAAGCATCGGACAACACTTTAGCATGG TVPLMCVEFYLILKVAGATKSMMWKLIFWSTVMLVTGFFGEYNDGSALGLGPALWGLLSGLAYFYIAYMVWFGEAKKLAVSAGGAVEKASDNTLAW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTACCATTAATGTGTGTTGAGTTCTATCTAATTTTAAAAGTT---------GCT------GGAGCAACAAAG---AGTATG------------------------------------ATGTGGAAA---CTTATCTTCTGGTCAACTGTAATGTTAGTTACAGGTTTCTTTGGTGAG---------TAC------------------AAT------GATGGT---------------------------------------------TCT---GCATTA---------GGA---------------------------TTAGGTCCT------------------GCTTTATGG---GGATTATTATCTGGTCTTGCGTACTTTTATATTGCTTACATGGTT---------------TGG------TTT---GGAGAAGCTAAGAAACTTGCTGTATCA------GCA---GGTGGAGCA---GTT---GAA---AAA---GCA---TCGGACAAC---ACTTTA---GCATGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLMCVEFYLILKV---A--GATK-SM------------MWK-LIFWSTVMLVTGFFGE---Y------N--DG---------------S-AL---G---------LGP------ALW-GLLSGLAYFYIAYMV-----W--F-GEAKKLAVS--A-GGA-V-E-K-A-SDN-TL-AW------------------------------------------------------------------------------------------------------------------------------------ [II-CFB-Psychroflexus]_FJ560808 [II-CFB-Psychroflexus] HEL85_env_samples_FJ560808 gi|223868763|gb|FJ560808| Uncultured microorganism clone HEL85 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL85 putative proteorhodopsin gene, partial cds FJ560808 [[proteorhodopsin super-cluster II/CFB-like cluster/Psychroflexus-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Psychroflexus-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTACCATTAATGTGTGTTGAGTTCTATCTAATTTTAAAAGTTGCTGGAGCAACAAAGAGTATGATGTGGAAACTTATCTTCTGGTCAACTGTAATGTTAGTTACAGGTTTCTTTGGTGAGTACAATGATGGTTCTGCATTAGGATTAGGTCCTGCTTTATGGGGATTATTATCTGGTCTTGCGTACTTTTATATTGCTTACATGGTTTGGTTTGGAGAAGCTAAAAAACTTGCTGTATCAGCAGGTGGAGCAGTTGAAAAAGCTCACAACACTTTAGCATGG TVPLMCVEFYLILKVAGATKSMMWKLIFWSTVMLVTGFFGEYNDGSALGLGPALWGLLSGLAYFYIAYMVWFGEAKKLAVSAGGAVEKAHNTLAW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTACCATTAATGTGTGTTGAGTTCTATCTAATTTTAAAAGTT---------GCT------GGAGCAACAAAG---AGTATG------------------------------------ATGTGGAAA---CTTATCTTCTGGTCAACTGTAATGTTAGTTACAGGTTTCTTTGGTGAG---------TAC------------------AAT------GATGGT---------------------------------------------TCT---GCATTA---------GGA---------------------------TTAGGTCCT------------------GCTTTATGG---GGATTATTATCTGGTCTTGCGTACTTTTATATTGCTTACATGGTT---------------TGG------TTT---GGAGAAGCTAAAAAACTTGCTGTATCA------GCA---GGTGGAGCA---GTT---GAA---AAA---GCT---CAC---AAC---ACTTTA---GCATGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLMCVEFYLILKV---A--GATK-SM------------MWK-LIFWSTVMLVTGFFGE---Y------N--DG---------------S-AL---G---------LGP------ALW-GLLSGLAYFYIAYMV-----W--F-GEAKKLAVS--A-GGA-V-E-K-A-H-N-TL-AW------------------------------------------------------------------------------------------------------------------------------------ [II-CFB-Krokinobacter]_EU079272 [II-CFB-Krokinobacter] clone_A_Mtd1_015_EU079272 gi|156106703|gb|EU079272| Uncultured organism clone A Mtd1 015 putative proteorhodopsin gene, partial cds. Uncultured organism clone A Mtd1 015 putative proteorhodopsin gene, partial cds. EU079272 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia PRO95-like Krokinobacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia PRO95-like Krokinobacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:155900 genomic DNA other 27-FEB-2008 #na Sargasso Sea surface water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99-109 (2008) 18211270 #na ATACTAACAGTTCCTTTAATGTGTGTTGAATTTTACCTTATACTAAAGGTTGCAGGAGCAAAACAAAGTATGATGTGGAAGCTTATCGGTTTATCAGTTGTAATGCTTGTTACGGTTACTTCGG ILTVPLMCVEFYLILKVAGAKQSMMWKLIGLSVVMLVTVTS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTAACAGTTCCTTTAATGTGTGTTGAATTTTACCTTATACTAAAGGTT---------GCA------GGAGCAAAACAA---AGTATG------------------------------------ATGTGGAAG---CTTATCGGTTTATCAGTTGTAATGCTTGTTACG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTACT------TCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GAKQ-SM------------MWK-LIGLSVVMLVT-------------------------------------------------------------------------------------------------VT--S---------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Krokinobacter]_EU079271 [II-CFB-Krokinobacter] clone_A_Mtd1_024_EU079271 gi|156106701|gb|EU079271| Uncultured organism clone A Mtd1 024 putative proteorhodopsin gene, partial cds. Uncultured organism clone A Mtd1 024 putative proteorhodopsin gene, partial cds. EU079271 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia PRO95-like Krokinobacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia PRO95-like Krokinobacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:155900 genomic DNA other 27-FEB-2008 #na Sargasso Sea surface water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99-109 (2008) 18211270 #na ATACTAACAGTTCCTTTAATGTGTGTTGAATTTTACCTTACACTAAAGGTTGCAGGAGCAAAACAAAGTATGATGTGGAAGCTTATTGGTTTATCAGTTGTAATGCTTGTTACGGTTACTTCGG ILTVPLMCVEFYLTLKVAGAKQSMMWKLIGLSVVMLVTVTS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTAACAGTTCCTTTAATGTGTGTTGAATTTTACCTTACACTAAAGGTT---------GCA------GGAGCAAAACAA---AGTATG------------------------------------ATGTGGAAG---CTTATTGGTTTATCAGTTGTAATGCTTGTTACG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTACTTCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLTLKV---A--GAKQ-SM------------MWK-LIGLSVVMLVT-------------------------------------------------------------------VTS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [II-CFB-Krokinobacter]_EU079267 [II-CFB-Krokinobacter] clone_A_Mtd1_020_EU079267 gi|156106693|gb|EU079267| Uncultured organism clone A Mtd1 020 putative proteorhodopsin gene, partial cds. Uncultured organism clone A Mtd1 020 putative proteorhodopsin gene, partial cds. EU079267 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia PRO95-like Krokinobacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia PRO95-like Krokinobacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:155900 genomic DNA other 27-FEB-2008 #na Sargasso Sea surface water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99-109 (2008) 18211270 #na ATACTAACAGTTCCTTTAATGTGTGTTGAATTTTACCTTATACTAAAGGTTGCAGGAGCAAAACAAAGTATGATGTGGAAGCTTATTGTTTTATCAGTTGTAATGCTTGTTACGGTTACTTCGG ILTVPLMCVEFYLILKVAGAKQSMMWKLIVLSVVMLVTVTS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTAACAGTTCCTTTAATGTGTGTTGAATTTTACCTTATACTAAAGGTT---------GCA------GGAGCAAAACAA---AGTATG------------------------------------ATGTGGAAG---CTTATTGTTTTATCAGTTGTAATGCTTGTTACGGTTACTTCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GAKQ-SM------------MWK-LIVLSVVMLVTVTS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Krokinobacter]_EU079269 [II-CFB-Krokinobacter] clone_A_Mtd1_019_EU079269 gi|156106697|gb|EU079269| Uncultured organism clone A Mtd1 019 putative proteorhodopsin gene, partial cds. Uncultured organism clone A Mtd1 019 putative proteorhodopsin gene, partial cds. EU079269 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia PRO95-like Krokinobacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia PRO95-like Krokinobacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:155900 genomic DNA other 27-FEB-2008 #na Sargasso Sea surface water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99-109 (2008) 18211270 #na ATACTAACAGTTCCTTTGATGTGTGTTGAATTTTACCTTATACTAAAGGTTGCAGGAGCAAAACTAAGTATGATGTGGAAGCTTATTGTTTTATCAGTTGTAATGCTTGTTACGGTTACTTCGG ILTVPLMCVEFYLILKVAGAKLSMMWKLIVLSVVMLVTVTS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTAACAGTTCCTTTGATGTGTGTTGAATTTTACCTTATACTAAAGGTT---------GCA------GGAGCAAAACTA---AGTATG------------------------------------ATGTGGAAG---CTTATTGTTTTATCAGTTGTAATGCTTGTTACGGTTACTTCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GAKL-SM------------MWK-LIVLSVVMLVTVTS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Krokinobacter]_EU079270 [II-CFB-Krokinobacter] clone_A_Mtd1_014_EU079270 gi|156106699|gb|EU079270| Uncultured organism clone A Mtd1 014 putative proteorhodopsin gene, partial cds. Uncultured organism clone A Mtd1 014 putative proteorhodopsin gene, partial cds. EU079270 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia PRO95-like Krokinobacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia PRO95-like Krokinobacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:155900 genomic DNA other 27-FEB-2008 #na Sargasso Sea surface water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99-109 (2008) 18211270 #na ATACTAACAGTTCCTTTGATGTGTGTTGAATTTTACCTTATACTAAAGGTTGCAGGAGCAAAACAAAGTATGATGTGGAAGCTTATTGTTTTATCAGTTGTAATGCTTGTCACGGTTACTTTGG ILTVPLMCVEFYLILKVAGAKQSMMWKLIVLSVVMLVTVTL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTAACAGTTCCTTTGATGTGTGTTGAATTTTACCTTATACTAAAGGTT---------GCA------GGAGCAAAACAA---AGTATG------------------------------------ATGTGGAAG---CTTATTGTTTTATCAGTTGTAATGCTTGTCACGGTTACTTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GAKQ-SM------------MWK-LIVLSVVMLVTVTL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Krokinobacter]_EU079265 [II-CFB-Krokinobacter] clone_A_Mtd1_013_EU079265 gi|156106689|gb|EU079265| Uncultured organism clone A Mtd1 013 putative proteorhodopsin gene, partial cds. Uncultured organism clone A Mtd1 013 putative proteorhodopsin gene, partial cds. EU079265 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia PRO95-like Krokinobacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia PRO95-like Krokinobacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:155900 genomic DNA other 27-FEB-2008 #na Sargasso Sea surface water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99-109 (2008) 18211270 #na ATACTAACAGTTCCTTTGATGTGTGTTGAATTTTACCTTATACTAAAGGTTGCGGGAGCAAAACAAAGTATGATGTGGAAGCTTATTGGTTTATCAGTTGTAATGCTTGTCACGGTTACTTCGG ILTVPLMCVEFYLILKVAGAKQSMMWKLIGLSVVMLVTVTS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTAACAGTTCCTTTGATGTGTGTTGAATTTTACCTTATACTAAAGGTT---------GCG------GGAGCAAAACAA---AGTATG------------------------------------ATGTGGAAG---CTTATTGGTTTATCAGTTGTAATGCTTGTCACG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTACT------TCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GAKQ-SM------------MWK-LIGLSVVMLVT-------------------------------------------------------------------------------------------------VT--S---------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Krokinobacter]_EU079273 [II-CFB-Krokinobacter] clone_A_Mtd1_016_EU079273 gi|156106705|gb|EU079273| Uncultured organism clone A Mtd1 016 putative proteorhodopsin gene, partial cds. Uncultured organism clone A Mtd1 016 putative proteorhodopsin gene, partial cds. EU079273 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia PRO95-like Krokinobacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia PRO95-like Krokinobacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:155900 genomic DNA other 27-FEB-2008 #na Sargasso Sea surface water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99-109 (2008) 18211270 #na ATACTAACAGTTCCTTTGATGTGTGTTGAATTTTACCTTATACTAAAGGTTGCAGGAGCAAAACAAAGTATGATGTGGAAGCTTATTGGTTTATCAGTTGTAATGCTTGTCACGGTTACTTCGG ILTVPLMCVEFYLILKVAGAKQSMMWKLIGLSVVMLVTVTS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTAACAGTTCCTTTGATGTGTGTTGAATTTTACCTTATACTAAAGGTT---------GCA------GGAGCAAAACAA---AGTATG------------------------------------ATGTGGAAG---CTTATTGGTTTATCAGTTGTAATGCTTGTCACG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTACT------TCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GAKQ-SM------------MWK-LIGLSVVMLVT-------------------------------------------------------------------------------------------------VT--S---------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Krokinobacter]_EU079274 [II-CFB-Krokinobacter] clone_A_Mtd1_023_EU079274 gi|156106707|gb|EU079274| Uncultured organism clone A Mtd1 023 putative proteorhodopsin gene, partial cds. Uncultured organism clone A Mtd1 023 putative proteorhodopsin gene, partial cds. EU079274 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia PRO95-like Krokinobacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia PRO95-like Krokinobacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:155900 genomic DNA other 27-FEB-2008 #na Sargasso Sea surface water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99-109 (2008) 18211270 #na ATACTAACAGTTCCTTTGATGTGTGTTGAATTTTACCTTATACTAAAGGTTGCAGGAGCAAAACAAAGTATGATGTGGAAGCTTATTGGTTTATCAGTTGTAATGCTTGTCACGGTTACTTTGG ILTVPLMCVEFYLILKVAGAKQSMMWKLIGLSVVMLVTVTL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTAACAGTTCCTTTGATGTGTGTTGAATTTTACCTTATACTAAAGGTT---------GCA------GGAGCAAAACAA---AGTATG------------------------------------ATGTGGAAG---CTTATTGGTTTATCAGTTGTAATGCTTGTCACGGTTACTTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GAKQ-SM------------MWK-LIGLSVVMLVTVTL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Krokinobacter]_EU079268 [II-CFB-Krokinobacter] clone_A_Mtd1_021_EU079268 gi|156106695|gb|EU079268| Uncultured organism clone A Mtd1 021 putative proteorhodopsin gene, partial cds. Uncultured organism clone A Mtd1 021 putative proteorhodopsin gene, partial cds. EU079268 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia PRO95-like Krokinobacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia PRO95-like Krokinobacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:155900 genomic DNA other 27-FEB-2008 #na Sargasso Sea surface water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99-109 (2008) 18211270 #na ATACTAACAGTTCCTTTAATGTGTGTTGAATTTTACCTTATACTAAAGGTTGCAGGAGCAAAACAAAGTATGATGTGGAAGCTTATTGGTTTATCAGTTGTAATGCTTGTTACGGTTACTTTGG ILTVPLMCVEFYLILKVAGAKQSMMWKLIGLSVVMLVTVTL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTAACAGTTCCTTTAATGTGTGTTGAATTTTACCTTATACTAAAGGTT---------GCA------GGAGCAAAACAA---AGTATG------------------------------------ATGTGGAAG---CTTATTGGTTTATCAGTTGTAATGCTTGTTACGGTTACTTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GAKQ-SM------------MWK-LIGLSVVMLVTVTL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Krokinobacter]_FJ560858 [II-CFB-Krokinobacter] HEL148_env_samples_FJ560858 gi|223868863|gb|FJ560858| Uncultured microorganism clone HEL148 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL148 putative proteorhodopsin gene, partial cds FJ560858 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia PRO95-like Krokinobacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia PRO95-like Krokinobacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTTCCTTTAATGTGTGTTGAATTCTATTTAATACTAAGGGTAGCAGGTGCTAAACAAAGTTTAATGTGGAAAATGATAGGTTTATCAGTTGTTATGTTAGTAACAGGATATTGGGGTGAGGCAGTAGCTACTGACCAAGCAGCCCTTTGGGGAGCAATCTCTGGAGCAGCTTATTTCTGGATTGTTTATGAGATCTGGTTAGGTGGTGCGGAAAAACTTGCCGAAGCAGCTGGAGGAGATGTTCTTAGCGCGACACAAAATTCTATG TVPLMCVEFYLILRVAGAKQSLMWKMIGLSVVMLVTGYWGEAVATDQAALWGAISGAAYFWIVYEIWLGGAEKLAEAAGGDVLSATQNSM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTTCCTTTAATGTGTGTTGAATTCTATTTAATACTAAGGGTA---------GCA------GGTGCTAAACAA---AGTTTA------------------------------------ATGTGGAAA---ATGATAGGTTTATCAGTTGTTATGTTAGTAACAGGATATTGGGGTGAG---------GCA------------------GTA------GCTACT------------------------------------------------------------------------------------------------GACCAAGCA------------------GCCCTTTGG---GGAGCAATCTCTGGAGCAGCTTATTTCTGGATTGTTTATGAGATC---------------TGG------TTA---GGTGGTGCGGAAAAACTTGCCGAAGCA------GCT---GGAGGAGAT---GTT---CTT---AGC---GCG---ACA---CAA---AATTCT---ATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLMCVEFYLILRV---A--GAKQ-SL------------MWK-MIGLSVVMLVTGYWGE---A------V--AT--------------------------------DQA------ALW-GAISGAAYFWIVYEI-----W--L-GGAEKLAEA--A-GGD-V-L-S-A-T-Q-NS-M------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Krokinobacter]_FJ560789 [II-CFB-Krokinobacter] HEL59_env_samples_FJ560789 gi|223868725|gb|FJ560789| Uncultured microorganism clone HEL59 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL59 putative proteorhodopsin gene, partial cds FJ560789 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia PRO95-like Krokinobacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia PRO95-like Krokinobacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTTCCTTTAATGTGTGTTGAATTCTATTTAATACTAAAGGTAGCAGGTGCTAAACAAAGTTTAATGTGGAAAATGATAGGTTTATCAGTTGTTATGTTAGTAACAGGATATTGGGGTGAGGCAGTAGCTACTGACCAAGCAGCCCTTTGGGGAGCAATCTCTGGAGCAGCTTATTTCTGGATTGTTTATGAGATCTGGTTAGGTGGTGCGAAAAAACTTGCCGAAGCAGCTGGAGGAGATGTTCTTAGCGCACACAAAATTCTATGTTGG TVPLMCVEFYLILKVAGAKQSLMWKMIGLSVVMLVTGYWGEAVATDQAALWGAISGAAYFWIVYEIWLGGAKKLAEAAGGDVLSAHKILCW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTTCCTTTAATGTGTGTTGAATTCTATTTAATACTAAAGGTA---------GCA------GGTGCTAAACAA---AGTTTA------------------------------------ATGTGGAAA---ATGATAGGTTTATCAGTTGTTATGTTAGTAACAGGATATTGGGGTGAG---------GCA------------------GTA------GCTACT------------------------------------------------------------------------------------------------GACCAAGCA------------------GCCCTTTGG---GGAGCAATCTCTGGAGCAGCTTATTTCTGGATTGTTTATGAGATC---------------TGG------TTA---GGTGGTGCGAAAAAACTTGCCGAAGCA------GCT---GGAGGAGAT---GTT---CTT---AGC---GCA---CAC---AAA---ATTCTA---TGTTGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLMCVEFYLILKV---A--GAKQ-SL------------MWK-MIGLSVVMLVTGYWGE---A------V--AT--------------------------------DQA------ALW-GAISGAAYFWIVYEI-----W--L-GGAKKLAEA--A-GGD-V-L-S-A-H-K-IL-CW------------------------------------------------------------------------------------------------------------------------------------ [II-CFB-Krokinobacter]_NC_015496 [II-CFB-Krokinobacter] 332290650_2509367_2510101_Krokinobacter_sp_4H_3_7_5_proteorhodopsin_genome gi|332290650|gb|NC_015496| Krokinobacter sp 4H375 chromosome, complete genome Krokinobacter sp 4H375 chromosome, complete genome NC_015496 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia PRO95-like Krokinobacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia PRO95-like Krokinobacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Krokinobacter] taxon:983548 genomic_DNA strain 06-juil-13 #na #na Pacific Ocean marine 34.922603 138.399144 #na #na #na #na #na ATGAAATTTTTATTACTATTACTAGCCGACCCAACAAAACTAGATCCAAGTGATTATGTAGGATTTACATTCTTTGTGGGTGCGATGGCGATGATGGCAGCTTCTGCTTTCTTTTTTCTATCGCTTAACCAATTTAACAAGAAGTGGCGAACCTCAGTCCTTGTATCTGGTTTAATCACATTTATTGCCGCAGTGCACTACTGGTACATGAGAGATTACTGGTTTGCTATTCAAGAGTCTCCTACATTTTTTAGATATGTAGACTGGGTACTTACAGTTCCATTAATGTGTGTTGAATTCTACTTAATTTTAAAAGTTGCCGGTGCAAAACCTGCACTCATGTGGAAGCTTATCTTATTCTCGGTTATTATGTTAGTAACAGGATACTTTGGAGAAGCTGTATTCCAAGATCAAGCCGCATTGTGGGGAGCTATCTCTGGAGCCGCATATTTTTATATAGTATATGAAATTTGGTTAGGAAGCGCAAAGAAACTTGCAGTTGCTGCTGGTGGAGATATTCTTAAAGCACATAAAATACTATGCTGGTTCGTACTCGTAGGTTGGGCTATTTATCCATTAGGATATATGCTAGGTACAGATGGATGGTACACGAGCATACTAGGAAAAGGAAGTGTAGATGTCGCTTATAACATTGCAGATGCTATCAATAAGATAGGGTTTGGACTAGTGATTTATGCACTAGCTGTAAAAAAGAATGAAGTTGATGTTGTT MKFLLLLLADPTKLDPSDYVGFTFFVGAMAMMAASAFFFLSLNQFNKKWRTSVLVSGLITFIAAVHYWYMRDYWFAIQESPTFFRYVDWVLTVPLMCVEFYLILKVAGAKPALMWKLILFSVIMLVTGYFGEAVFQDQAALWGAISGAAYFYIVYEIWLGSAKKLAVAAGGDILKAHKILCWFVLVGWAIYPLGYMLGTDGWYTSILGKGSVDVAYNIADAINKIGFGLVIYALAVKKNEVDVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAATTTTTA------TTACTATTACTAGCCGACCCAACAAAACTAGATCCAAGTGATTATGTAGGATTTACATTCTTTGTGGGTGCGATGGCGATGATGGCAGCTTCTGCTTTCTTTTTTCTATCGCTTAACCAATTTAACAAGAAGTGGCGAACCTCAGTCCTTGTATCTGGTTTAATCACATTTATTGCCGCAGTGCACTACTGGTACATGAGAGATTACTGGTTT---------------------------------------------------GCTATTCAAGAGTCTCCTACATTTTTTAGATATGTAGACTGG------------------------GTACTTACAGTTCCATTAATGTGTGTTGAATTCTACTTAATTTTAAAAGTT---------GCC------GGTGCAAAACCT---GCACTC------------------------------------ATGTGGAAG---CTTATCTTATTCTCGGTTATTATGTTAGTAACAGGATACTTTGGAGAA---------GCT------------------GTA------TTCCAA------------------------------------------------------------------------------------------------GATCAAGCC------------------GCATTGTGG---GGAGCTATCTCTGGAGCCGCATATTTTTATATAGTATATGAAATT---------------TGG------TTA---GGAAGCGCAAAGAAACTTGCAGTTGCT------GCT---GGTGGAGAT---ATT---CTT---AAA---GCA---CAT---AAA---ATACTA---TGCTGGTTCGTACTCGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCATTAGGATATATGCTAGGTACAGATGGA---TGGTAC---------ACG---AGCATACTAGGAAAAGGAAGT---------------------GTAGATGTCGCTTATAACATTGCAGATGCTATCAATAAGATAGGGTTTGGACTAGTGATTTATGCACTAGCTGTAAAAAAGAATGAAGTTGATGTTGTT------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------------------MKFL--LLLLADPTKLDPSDYVGFTFFVGAMAMMAASAFFFLSLNQFNKKWRTSVLVSGLITFIAAVHYWYMRDYWF-----------------AIQESPTFFRYVDW--------VLTVPLMCVEFYLILKV---A--GAKP-AL------------MWK-LILFSVIMLVTGYFGE---A------V--FQ--------------------------------DQA------ALW-GAISGAAYFYIVYEI-----W--L-GSAKKLAVA--A-GGD-I-L-K-A-H-K-IL-CWFVLV---------------------GW---AIYPLGYMLGTDG-WY---T-SILGKGS-------VDVAYNIADAINKIGFGLVIYALAVKKNEVDVV---------------------------------- [II-CFB-Krokinobacter]_FJ627053 [II-CFB-Krokinobacter] Dokdonia_donghaensis_PRO95_complete_FJ627053 gi|223452818|gb|FJ627053| Dokdonia sp PRO95 proteorhodopsin gene, complete cds Dokdonia sp PRO95 proteorhodopsin gene, complete cds FJ627053 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia PRO95-like Krokinobacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia PRO95-like Krokinobacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Dokdonia] taxon:1239415 genomic_DNA strain 05-oct-12 01-sept-06 water_sample North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ATGAAATTTTTATTACAATTACTATTACTTGCCGACCCTACAAAACTAGATCCAAGTGATTATGTAGGATTTACATTTTTTGTGGGTGCGATGGCTATGATGGCAGCTTCTGCTTTCTTTTTTCTATCCCTCAACCAATTTAACAAGAAGTGGCGAACCTCAGTGCTGGTTTCCGGATTAATTACGTTTATTGCTGCAGTGCACTACTGGTACATGCGAGATTATTGGTTTGCTATTCAAGAGTCTCCTACCTTTTTTAGATACGTAGACTGGGTACTTACCGTTCCATTAATGTGCGTTGAATTCTACTTAATACTAAAAGTAGCTGGTGCAAAACCTGCACTTATGTGGAAACTAATTGTGTTTTCTGTAATTATGCTCGTAACAGGGTACTTTGGAGAAGCTGTATTTCAAGATCAAGCAGCATTATGGGGAGCTATCTCTGGAGCCGCATATTTCTATATCGTGTATGAAATCTGGTTAGGAAGCGCAAAGAAAATAGCTGTAGCCGCAGGTGGAGATATTCTCAAAGCACATAAAATATTATGCTGGTTTGTACTTGTAGGTTGGGCGATTTATCCACTAGGATATATGTTAGGTACAGACGGATGGTATACGAGCATCTTAGGAAAAGGAAGCGTAGATATCGCTTATAATATTGCAGATGCTATCAATAAGATAGGATTTGGACTAGTGATTTATGCACTAGCTGTTAAGAAGAATGAAGTTGAGGTTGTT MKFLLQLLLLADPTKLDPSDYVGFTFFVGAMAMMAASAFFFLSLNQFNKKWRTSVLVSGLITFIAAVHYWYMRDYWFAIQESPTFFRYVDWVLTVPLMCVEFYLILKVAGAKPALMWKLIVFSVIMLVTGYFGEAVFQDQAALWGAISGAAYFYIVYEIWLGSAKKIAVAAGGDILKAHKILCWFVLVGWAIYPLGYMLGTDGWYTSILGKGSVDIAYNIADAINKIGFGLVIYALAVKKNEVEVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAATTTTTATTACAATTACTATTACTTGCCGACCCTACAAAACTAGATCCAAGTGATTATGTAGGATTTACATTTTTTGTGGGTGCGATGGCTATGATGGCAGCTTCTGCTTTCTTTTTTCTATCCCTCAACCAATTTAACAAGAAGTGGCGAACCTCAGTGCTGGTTTCCGGATTAATTACGTTTATTGCTGCAGTGCACTACTGGTACATGCGAGATTATTGGTTT---------------------------------------------------GCTATTCAAGAGTCTCCTACCTTTTTTAGATACGTAGACTGG------------------------GTACTTACCGTTCCATTAATGTGCGTTGAATTCTACTTAATACTAAAAGTA---------GCT------GGTGCAAAACCT---GCACTT------------------------------------ATGTGGAAA---CTAATTGTGTTTTCTGTAATTATGCTCGTAACAGGGTACTTTGGAGAA---------GCT------------------GTA------TTTCAA------------------------------------------------------------------------------------------------GATCAAGCA------------------GCATTATGG---GGAGCTATCTCTGGAGCCGCATATTTCTATATCGTGTATGAAATC---------------TGG------TTA---GGAAGCGCAAAGAAAATAGCTGTAGCC------GCA---GGTGGAGAT---ATT---CTC---AAA---GCA---CAT---AAA---ATATTA---TGCTGGTTTGTACTTGTA---------------------------------------------------------------GGTTGG---------GCGATTTATCCACTAGGATATATGTTAGGTACAGACGGA---TGGTAT---------ACG---AGCATCTTAGGAAAAGGAAGC---------------------GTAGATATCGCTTATAATATTGCAGATGCTATCAATAAGATAGGATTTGGACTAGTGATTTATGCACTAGCTGTTAAGAAGAATGAAGTTGAGGTTGTT------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------------------MKFLLQLLLLADPTKLDPSDYVGFTFFVGAMAMMAASAFFFLSLNQFNKKWRTSVLVSGLITFIAAVHYWYMRDYWF-----------------AIQESPTFFRYVDW--------VLTVPLMCVEFYLILKV---A--GAKP-AL------------MWK-LIVFSVIMLVTGYFGE---A------V--FQ--------------------------------DQA------ALW-GAISGAAYFYIVYEI-----W--L-GSAKKIAVA--A-GGD-I-L-K-A-H-K-IL-CWFVLV---------------------GW---AIYPLGYMLGTDG-WY---T-SILGKGS-------VDIAYNIADAINKIGFGLVIYALAVKKNEVEVV---------------------------------- [II-CFB-Krokinobacter]_AB557561 [II-CFB-Krokinobacter] PZ13_Bizionia_AB557561 gi|376317456|gb|AB557561| Bizionia sp PZ13 PR gene for proteorhodopsin, partial cds Bizionia sp PZ13 PR gene for proteorhodopsin, partial cds AB557561 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia PRO95-like Krokinobacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia PRO95-like Krokinobacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Bizionia] taxon:754421 genomic_DNA strain 03MAY2012 #na seawater Pacific Ocean marine 35 139.3333 Diversity and functional analysis of proteorhodopsin in marine Flavobacteria Yoshizawa,S., Kawanabe,A., Ito,H., Kandori,H. and Kogure,K. Environ. Microbiol. 14 (5), 12401248 (2012) 22329552 #na TTCTTTTTATCCTTAAATCAGTTTGATAATAAATGGAGAACATCTGTTCTAGTTTCAGGACTTATAACCTTCATAGCAGCAGTACATTACTGGTACATGAGGGATTATTGGGCTGTAAATATGGAGTCGCCAACATTCTTTAGGTATGTCGATTGGATACTTACAGTACCTTTAATGTGTGTAGAGTTTTATCTAATATTAAAAGTAGCTGGAGCTAAATCCTCATTAATGTGGAGACTAATAGGTTTATCCGTTATAATGTTAGTAACAGGTTATTTCGGAGAAGCTGTATTTCCAGAACAGGCTGCCTTATGGGGAGGAATATCTGGTATAGCATATTTTATTATTGTTTATGATATTTGGTTAGGTAGTGCTAAAAAACTTGCTGTAGCAGCTGGAGGAGACATTTTAAAGGCACATAAAATA FFLSLNQFDNKWRTSVLVSGLITFIAAVHYWYMRDYWAVNMESPTFFRYVDWILTVPLMCVEFYLILKVAGAKSSLMWRLIGLSVIMLVTGYFGEAVFPEQAALWGGISGIAYFIIVYDIWLGSAKKLAVAAGGDILKAHKI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTTTATCCTTAAATCAGTTTGATAATAAATGGAGAACATCTGTTCTAGTTTCAGGACTTATAACCTTCATAGCAGCAGTACATTACTGGTACATGAGGGATTATTGGGCT---------------------------------------------------GTAAATATGGAGTCGCCAACATTCTTTAGGTATGTCGATTGG------------------------ATACTTACAGTACCTTTAATGTGTGTAGAGTTTTATCTAATATTAAAAGTA---------GCT------GGAGCTAAATCC---TCATTA------------------------------------ATGTGGAGA---CTAATAGGTTTATCCGTTATAATGTTAGTAACAGGTTATTTCGGAGAA---------GCT------------------GTA------TTTCCA------------------------------------------------------------------------------------------------GAACAGGCT------------------GCCTTATGG---GGAGGAATATCTGGTATAGCATATTTTATTATTGTTTATGATATT---------------TGG------TTA---GGTAGTGCTAAAAAACTTGCTGTAGCA------GCT---GGAGGAGAC---ATT---TTA---AAG---GCA---CAT---AAA---ATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------FFLSLNQFDNKWRTSVLVSGLITFIAAVHYWYMRDYWA-----------------VNMESPTFFRYVDW--------ILTVPLMCVEFYLILKV---A--GAKS-SL------------MWR-LIGLSVIMLVTGYFGE---A------V--FP--------------------------------EQA------ALW-GGISGIAYFIIVYDI-----W--L-GSAKKLAVA--A-GGD-I-L-K-A-H-K-I---------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Krokinobacter]_JX312349 [II-CFB-Krokinobacter] Sediminibacter_sp_YIK-SED-12_JX312349 gi|404428505|gb|JX312349| Sediminibacter sp. YIK-SED-12 proteorhodpsin (PR) gene, partial cds. Sediminibacter sp. YIK-SED-12 proteorhodpsin (PR) gene, partial cds. JX312349 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia PRO95-like Krokinobacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia PRO95-like Krokinobacter-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Sediminibacter] taxon:1221366 genomic DNA strain 30-sept-13 #na #na #na #na #na Phylogenetic characterization of culturable proteorhodopsin-bearing flavobacteria in marine sediments Li,N. and Kim,J.S. Unpublished #na #na CTGGTTTCTGGATTGATAACTTTTATTGCTGCAGTGCATTATTTTTACATGCGAGACTATTGGTTTTCAAATGTAGAGTCTCCAACTTTCTTTAGGTATGTTGATTGGCTGTTAACTGTTCCTCTTATGTGTGTTGAGTTTTATTTGATTCTTAAGGTGGCAGGTGCAAAAACATCTCTCATGTGGAAACTTATTCTGGCATCTGTGATAATGTTGGTCACTGGTTATTTTGGGGAGGCAGTATTTACAAACCAAGCGGCTTTATGGGGAGGTATCTCTGGTGTAGCCTATTTTTACATTGTCTATGAAATTTGGCTCGGAAGTGCAAAGAAATTAGCG LVSGLITFIAAVHYFYMRDYWFSNVESPTFFRYVDWLLTVPLMCVEFYLILKVAGAKTSLMWKLILASVIMLVTGYFGEAVFTNQAALWGGISGVAYFYIVYEIWLGSAKKLA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGGTTTCTGGATTGATAACTTTTATTGCTGCAGTGCATTATTTTTACATGCGAGACTATTGGTTT---------------------------------------------------TCAAATGTAGAGTCTCCAACTTTCTTTAGGTATGTTGATTGG------------------------CTGTTAACTGTTCCTCTTATGTGTGTTGAGTTTTATTTGATTCTTAAGGTG---------GCA------GGTGCAAAAACA---TCTCTC------------------------------------ATGTGGAAA---CTTATTCTGGCATCTGTGATAATGTTGGTCACTGGTTATTTTGGGGAG---------GCA------------------GTA------TTTACA------------------------------------------------------------------------------------------------AACCAAGCG------------------GCTTTATGG---GGAGGTATCTCTGGTGTAGCCTATTTTTACATTGTCTATGAAATT---------------TGG------CTC---GGAAGTGCAAAGAAATTAGCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------LVSGLITFIAAVHYFYMRDYWF-----------------SNVESPTFFRYVDW--------LLTVPLMCVEFYLILKV---A--GAKT-SL------------MWK-LILASVIMLVTGYFGE---A------V--FT--------------------------------NQA------ALW-GGISGVAYFYIVYEI-----W--L-GSAKKLA--------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Maribacter]_AB557557 [II-CFB-Maribacter] PG16_Winogradskyella_AB557557 gi|376317448|gb|AB557557| Winogradskyella sp PG16 PR gene for proteorhodopsin, partial cds Winogradskyella sp PG16 PR gene for proteorhodopsin, partial cds AB557557 [[proteorhodopsin super-cluster II/CFB-like cluster/Maribacter-like Winogradskyella-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Maribacter-like Winogradskyella-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Winogradskyella] taxon:754410 genomic_DNA strain 03MAY2012 #na seawater Pacific Ocean marine 35 139.3333 Diversity and functional analysis of proteorhodopsin in marine Flavobacteria Yoshizawa,S., Kawanabe,A., Ito,H., Kandori,H. and Kogure,K. Environ. Microbiol. 14 (5), 12401248 (2012) 22329552 #na TTCTTTTTATCACTAAATCAATTTGATAAAAAATGGAGAACCTCCGTATTAGTCTCTGGACTAATCACCTTTATTGCCGCAGTGCATTACTTCTATATGAGGGATTATTGGGCTGCAAACATGGAATCACCCACATTTTTTAGATATGTAGATTGGATATTAACGGTTCCTTTAATGTGCGTAGAATTTTACCTAATACTCAAAGTAGCAGGAGCAAAACAATCATTAATGTGGAAAATGATATTCTTTTCAGTAGTGATGTTAATTACAGGATATTTTGGTGAAGCTGTATTTAATACTGGCAGTGGACCTGCAGTTTGGGGAGCAATTTCAGGCGCGGCTTATTTCTATATTGTGTACGAAATTTGGTTTGGAAGTGCCAAAAAGTTAGCAGTTGAAGCAGGAGGTGACGTACTTCAAGCTCACAAAATA FFLSLNQFDKKWRTSVLVSGLITFIAAVHYFYMRDYWAANMESPTFFRYVDWILTVPLMCVEFYLILKVAGAKQSLMWKMIFFSVVMLITGYFGEAVFNTGSGPAVWGAISGAAYFYIVYEIWFGSAKKLAVEAGGDVLQAHKI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTTTATCACTAAATCAATTTGATAAAAAATGGAGAACCTCCGTATTAGTCTCTGGACTAATCACCTTTATTGCCGCAGTGCATTACTTCTATATGAGGGATTATTGGGCT---------------------------------------------------GCAAACATGGAATCACCCACATTTTTTAGATATGTAGATTGG------------------------ATATTAACGGTTCCTTTAATGTGCGTAGAATTTTACCTAATACTCAAAGTA---------GCA------GGAGCAAAACAA---TCATTA------------------------------------ATGTGGAAA---ATGATATTCTTTTCAGTAGTGATGTTAATTACAGGATATTTTGGTGAA---------GCT------------------GTA------TTTAAT------------------------------------------------------ACT---------GGC---------------------------AGTGGACCT------------------GCAGTTTGG---GGAGCAATTTCAGGCGCGGCTTATTTCTATATTGTGTACGAAATT---------------TGG------TTT---GGAAGTGCCAAAAAGTTAGCAGTTGAA------GCA---GGAGGTGAC---GTA---CTT---CAA---GCT---CAC---AAA---ATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------FFLSLNQFDKKWRTSVLVSGLITFIAAVHYFYMRDYWA-----------------ANMESPTFFRYVDW--------ILTVPLMCVEFYLILKV---A--GAKQ-SL------------MWK-MIFFSVVMLITGYFGE---A------V--FN------------------T---G---------SGP------AVW-GAISGAAYFYIVYEI-----W--F-GSAKKLAVE--A-GGD-V-L-Q-A-H-K-I---------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Maribacter]_AB557552 [II-CFB-Maribacter] PG2_Winogradskyella_AB557552 gi|376317438|gb|AB557552| Winogradskyella sp PG2 PR gene for proteorhodopsin, partial cds Winogradskyella sp PG2 PR gene for proteorhodopsin, partial cds AB557552 [[proteorhodopsin super-cluster II/CFB-like cluster/Maribacter-like Winogradskyella-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Maribacter-like Winogradskyella-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Winogradskyella] taxon:754409 genomic_DNA strain 03MAY2012 #na seawater Pacific Ocean marine 35 139.3333 Diversity and functional analysis of proteorhodopsin in marine Flavobacteria Yoshizawa,S., Kawanabe,A., Ito,H., Kandori,H. and Kogure,K. Environ. Microbiol. 14 (5), 12401248 (2012) 22329552 #na TTCTTTTTATCACTAAATCAATTTGATAAAAAATGGAGAACCTCCGTATTAGTCTCTGGACTAATCACCTTTATTGCCGCAGTGCATTACTTCTATATGAGGGATTATTGGGCTGCAAACATGGAATCACCCACATTTTTTAGATATGTAGATTGGATATTAACGGTTCCTTTAATGTGCGTAGAATTTTACCTAATACTCAAAGTAGCAGGAGCAAAACAATCATTAATGTGGAAAATGATATTCTTTTCAGTAGTGATGTTAATTACAGGATATTTTGGTGAAGCTGTATTTAATACTGGCAGTGGACCTGCAGTTTGGGGAGCAATTTCAGGCGCGGCTTATTTCTATATTGTGTACGAAATTTGGTTTGGAAGTGCCAAAAAGTTAGCAGTTGAAGCAGGAGGTGACGTACTTCAAGCTCACAAAATA FFLSLNQFDKKWRTSVLVSGLITFIAAVHYFYMRDYWAANMESPTFFRYVDWILTVPLMCVEFYLILKVAGAKQSLMWKMIFFSVVMLITGYFGEAVFNTGSGPAVWGAISGAAYFYIVYEIWFGSAKKLAVEAGGDVLQAHKI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTTTATCACTAAATCAATTTGATAAAAAATGGAGAACCTCCGTATTAGTCTCTGGACTAATCACCTTTATTGCCGCAGTGCATTACTTCTATATGAGGGATTATTGGGCT---------------------------------------------------GCAAACATGGAATCACCCACATTTTTTAGATATGTAGATTGG------------------------ATATTAACGGTTCCTTTAATGTGCGTAGAATTTTACCTAATACTCAAAGTA---------GCA------GGAGCAAAACAA---TCATTA------------------------------------ATGTGGAAA---ATGATATTCTTTTCAGTAGTGATGTTAATTACAGGATATTTTGGTGAA---------GCT------------------GTA------TTTAAT------------------------------------------------------ACT---------GGC---------------------------AGTGGACCT------------------GCAGTTTGG---GGAGCAATTTCAGGCGCGGCTTATTTCTATATTGTGTACGAAATT---------------TGG------TTT---GGAAGTGCCAAAAAGTTAGCAGTTGAA------GCA---GGAGGTGAC---GTA---CTT---CAA---GCT---CAC---AAA---ATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------FFLSLNQFDKKWRTSVLVSGLITFIAAVHYFYMRDYWA-----------------ANMESPTFFRYVDW--------ILTVPLMCVEFYLILKV---A--GAKQ-SL------------MWK-MIFFSVVMLITGYFGE---A------V--FN------------------T---G---------SGP------AVW-GAISGAAYFYIVYEI-----W--F-GSAKKLAVE--A-GGD-V-L-Q-A-H-K-I---------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Maribacter]_AB557562 [II-CFB-Maribacter] PZ17_Winogradskyella_AB557562 gi|376317458|gb|AB557562| Winogradskyella sp PZ17 PR gene for proteorhodopsin, partial cds Winogradskyella sp PZ17 PR gene for proteorhodopsin, partial cds AB557562 [[proteorhodopsin super-cluster II/CFB-like cluster/Maribacter-like Winogradskyella-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Maribacter-like Winogradskyella-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Winogradskyella] taxon:754408 genomic_DNA strain 03MAY2012 #na seawater Pacific Ocean marine 35 139.3333 Diversity and functional analysis of proteorhodopsin in marine Flavobacteria Yoshizawa,S., Kawanabe,A., Ito,H., Kandori,H. and Kogure,K. Environ. Microbiol. 14 (5), 12401248 (2012) 22329552 #na TTCTTTTTATCACTAAATCAATTTGATAAAAAATGGAGAACCTCCGTATTAGTCTCTGGACTAATCACCTTTATTGCCGCAGTGCATTACTTCTATATGAGGGATTATTGGGCTGCAAACATGGAATCACCCACATTTTTTAGATATGTAGATTGGATATTAACGGTTCCTTTAATGTGCGTAGAATTTTACCTAATACTCAAAGTAGCAGGAGCAAAACAATCATTAATGTGGAAAATGATATTCTTTTCAGTAGTGATGTTAATTACAGGATATTTTGGTGAAGCTGTATTTAATACTGGCAGTGGACCTGCAGTTTGGGGAGCAATTTCAGGCGCGGCTTATTTCTATATTGTGTACGAAATTTGGTTTGGAAGTGCCAAAAAGTTAGCAGTTGAAGCAGGAGGTGACGTACTTCAAGCTCACAAAATA FFLSLNQFDKKWRTSVLVSGLITFIAAVHYFYMRDYWAANMESPTFFRYVDWILTVPLMCVEFYLILKVAGAKQSLMWKMIFFSVVMLITGYFGEAVFNTGSGPAVWGAISGAAYFYIVYEIWFGSAKKLAVEAGGDVLQAHKI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTTTATCACTAAATCAATTTGATAAAAAATGGAGAACCTCCGTATTAGTCTCTGGACTAATCACCTTTATTGCCGCAGTGCATTACTTCTATATGAGGGATTATTGGGCT---------------------------------------------------GCAAACATGGAATCACCCACATTTTTTAGATATGTAGATTGG------------------------ATATTAACGGTTCCTTTAATGTGCGTAGAATTTTACCTAATACTCAAAGTA---------GCA------GGAGCAAAACAA---TCATTA------------------------------------ATGTGGAAA---ATGATATTCTTTTCAGTAGTGATGTTAATTACAGGATATTTTGGTGAA---------GCT------------------GTA------TTTAAT------------------------------------------------------ACT---------GGC---------------------------AGTGGACCT------------------GCAGTTTGG---GGAGCAATTTCAGGCGCGGCTTATTTCTATATTGTGTACGAAATT---------------TGG------TTT---GGAAGTGCCAAAAAGTTAGCAGTTGAA------GCA---GGAGGTGAC---GTA---CTT---CAA---GCT---CAC---AAA---ATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------FFLSLNQFDKKWRTSVLVSGLITFIAAVHYFYMRDYWA-----------------ANMESPTFFRYVDW--------ILTVPLMCVEFYLILKV---A--GAKQ-SL------------MWK-MIFFSVVMLITGYFGE---A------V--FN------------------T---G---------SGP------AVW-GAISGAAYFYIVYEI-----W--F-GSAKKLAVE--A-GGD-V-L-Q-A-H-K-I---------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Maribacter]_EU683553 [II-CFB-Maribacter] W110_env_samples_EU683553 gi|187711579|gb|EU683553| Uncultured bacterium clone W110 putative proteorhodopsin gene, partial cds Uncultured bacterium clone W110 putative proteorhodopsin gene, partial cds EU683553 [[proteorhodopsin super-cluster II/CFB-like cluster/Maribacter-like Winogradskyella-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Maribacter-like Winogradskyella-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 09-janv-09 01-janv-07 East_China_Sea_[near_Yangtzi_River_estuary]_surface_water_[2m] China Sea marine 31.3 122.2 Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas Zhao,M., Chen,F. and Jiao,N. Appl. Environ. Microbiol. 75 (2), 529533 (2009) 18931298 #na GCTATGATGGCAGCTTCGGCTTTTTTCTTTTTATCACTTAATCAATTTGATAGAAAATGGCGAACCTCTGTACTGGTTTCAGGTTTAATTACGTTTATTGCCGCAGTACACTATTTTTACATGAGAGATTATTGGGCCGCTCACATGGAATCTCCAACATTTTTCAGATATGTAGACTGGATTTTAACAGTGCCTTTAATGTGTGTAGAATTTTACTTAATCCTTAAAATTGCTGGTGCAAAACCTTCTCTAATGTGGAAAATGATTGGATTTTCTGTAATCATGCTCGTTACTGGTTATTTTGGTGAA AMMAASAFFFLSLNQFDRKWRTSVLVSGLITFIAAVHYFYMRDYWAAHMESPTFFRYVDWILTVPLMCVEFYLILKIAGAKPSLMWKMIGFSVIMLVTGYFGE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATGATGGCAGCTTCGGCTTTTTTCTTTTTATCACTTAATCAATTTGATAGAAAATGGCGAACCTCTGTACTGGTTTCAGGTTTAATTACGTTTATTGCCGCAGTACACTATTTTTACATGAGAGATTATTGGGCC---------------------------------------------------GCTCACATGGAATCTCCAACATTTTTCAGATATGTAGACTGG------------------------ATTTTAACAGTGCCTTTAATGTGTGTAGAATTTTACTTAATCCTTAAAATT---------GCT------GGTGCAAAACCT---TCTCTA------------------------------------ATGTGGAAA---ATGATTGGATTTTCTGTAATCATGCTCGTTACTGGTTATTTTGGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------AMMAASAFFFLSLNQFDRKWRTSVLVSGLITFIAAVHYFYMRDYWA-----------------AHMESPTFFRYVDW--------ILTVPLMCVEFYLILKI---A--GAKP-SL------------MWK-MIGFSVIMLVTGYFGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Maribacter]_JX863345 [II-CFB-Maribacter] RCC2395_Maribacter_JX863345 gi|425477640|gb|JX863345| Maribacter sp RCC2395 putative proteorhodopsin gene, partial cds Maribacter sp RCC2395 putative proteorhodopsin gene, partial cds JX863345 [[proteorhodopsin super-cluster II/CFB-like cluster/Maribacter-like Winogradskyella-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Maribacter-like Winogradskyella-like subcluster proteorhodopsin proton pump na ; na light-energy conversion (ion transport) unknown [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Maribacter] taxon:1262155 genomic_DNA strain 01-DEC-2012 12Aug2009 70m_depth Arctic Ocean marine 70.54 -140.78 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Lebaron,P. and Jeanthon,C. Unpublished #na #na ATTAAAGTCGCTGGTGCTAAGCAATCATTAATGTGGAAACTAATTTTAGCTTCTGTTGTCATGCTAGTCACAGGTTATGCTGGTGAAGCAATATTTACTACTGGAACTGGTCCAGCGCTTTGGGGCTTCTTTTCAGGTGTTGCTTACTTCTATATTGTGTATGAAATATGGTTTGGAAGTGCAAGAAAATTGGCAGAAAAAGCTGGTGGTGCAGTTTTAAAAGCACACAAAACGCTATGTTGGTTTGTATTGGTC IKVAGAKQSLMWKLILASVVMLVTGYAGEAIFTTGTGPALWGFFSGVAYFYIVYEIWFGSARKLAEKAGGAVLKAHKTLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAAAGTC---------GCT------GGTGCTAAGCAA---TCATTA------------------------------------ATGTGGAAA---CTAATTTTAGCTTCTGTTGTCATGCTAGTCACAGGTTATGCTGGTGAA---------GCA------------------ATA------TTTACT------------------------------------------------------ACT---------GGA---------------------------ACTGGTCCA------------------GCGCTTTGG---GGCTTCTTTTCAGGTGTTGCTTACTTCTATATTGTGTATGAAATA---------------TGG------TTT---GGAAGTGCAAGAAAATTGGCAGAAAAA------GCT---GGTGGTGCA---GTT---TTA---AAA---GCA---CAC---AAA---ACGCTA---TGTTGGTTTGTATTGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IKV---A--GAKQ-SL------------MWK-LILASVVMLVTGYAGE---A------I--FT------------------T---G---------TGP------ALW-GFFSGVAYFYIVYEI-----W--F-GSARKLAEK--A-GGA-V-L-K-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB]_JX863191 [II-CFB] MALINA_OTU28_303_M_env_samples_JX863191 gi|425477332|gb|JX863191| Uncultured bacterium clone MALINA OTU28 303 M putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU28 303 M putative proteorhodopsin gene, partial cds JX863191 [[proteorhodopsin super-cluster II/CFB-like cluster]] proteorhodopsin super-cluster II CFB-like cluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 11-juil-09 0m_depth Arctic Ocean marine 67.49 -168.12 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGGTTCTAACAGTTCCTTTAATGTGTGTTGAATTCTACCTTATTTTAAAAGTAGCAGGTGCTAAAAAATCTTTGATGTGGAAATTAATATTTGCTTCAATGATAATGTTAATTGCAGGTTACTTCGGAGAAGCTGTGTATACAGACCAATCTGCCTTGTGGGGGTTAATTTCAGGTTTGGCTTATTTCTATATTGTATATGAAATTTGGTTAGGAAGTGCCAAAAAATTAGCAGTTGATGCTGGTGGAGATGTTTTACAAGCACACAAGATTTTATGTTGGTTCGTATTAGTT WVLTVPLMCVEFYLILKVAGAKKSLMWKLIFASMIMLIAGYFGEAVYTDQSALWGLISGLAYFYIVYEIWLGSAKKLAVDAGGDVLQAHKILCWFVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------GTTCTAACAGTTCCTTTAATGTGTGTTGAATTCTACCTTATTTTAAAAGTA---------GCA------GGTGCTAAAAAA---TCTTTG------------------------------------ATGTGGAAA---TTAATATTTGCTTCAATGATAATGTTAATTGCAGGTTACTTCGGAGAA---------GCT------------------GTG------TATACA------------------------------------------------------------------------------------------------GACCAATCT------------------GCCTTGTGG---GGGTTAATTTCAGGTTTGGCTTATTTCTATATTGTATATGAAATT---------------TGG------TTA---GGAAGTGCCAAAAAATTAGCAGTTGAT------GCT---GGTGGAGAT---GTT---TTA---CAA---GCA---CAC---AAG---ATTTTA---TGTTGGTTCGTATTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------VLTVPLMCVEFYLILKV---A--GAKK-SL------------MWK-LIFASMIMLIAGYFGE---A------V--YT--------------------------------DQS------ALW-GLISGLAYFYIVYEI-----W--L-GSAKKLAVD--A-GGD-V-L-Q-A-H-K-IL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_EU328197 [II-CFB-AAA027E17] clone_PS350-20_EU328197 gi|164600748|gb|EU328197| Uncultured bacterium clone PS350-20 putative proteorhodopsin pseudogene, partial sequence. Uncultured bacterium clone PS350-20 putative proteorhodopsin pseudogene, partial sequence. EU328197 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 15-janv-08 01-juin-07 Damariscotta Lake water 1 m depth Atlantic Ocean freshwater 44.105494 -69.473356 Bacteriorhodopsin presence in freshwater lakes Stepanauskas,R. and Sieracki,M.E. Unpublished #na #na TATGTTGACTGGTTATTGACTGTGCCTTTAATGTGTGTTGAATTCTATTTAATCACAAAGAAAGCAGGCGGTACAATAGGTTTATTATGGAAGATGATTTTAGCTTCTGTTGTAATGTTAGTTACAGGTTATTGGGGAGAGGCTGTTGCCCCAGCTCAAGCTACATTATGGGGAACTATAAGTGCTATCGCTTACTTCTACATTGTGTATGAAGTATGGTTAGGAGATGTTAAAAAATTAGCAACTGGCGCTGGTACTGCAGTAGCATCTGCGAATGCAGCATTAGGTTGGTTCGTTTTAGTTGGTTGGGCCATTTATCC YVDWLLTVPLMCVEFYLITKKAGGTIGLLWKMILASVVMLVTGYWGEAVAPAQATLWGTISAIAYFYIVYEVWLGDVKKLATGAGTAVASANAALGWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTTGACTGG------------------------TTATTGACTGTGCCTTTAATGTGTGTTGAATTCTATTTAATCACAAAGAAA---------GCA------GGCGGTACAATA---GGTTTA------------------------------------TTATGGAAG---ATGATTTTAGCTTCTGTTGTAATGTTAGTTACAGGTTATTGGGGAGAG---------GCT------------------GTT------GCCCCA------------------------------------------------------------------------------------------------GCTCAAGCT------------------ACATTATGG---GGAACTATAAGTGCTATCGCTTACTTCTACATTGTGTATGAAGTA---------------TGG------TTA---GGAGATGTTAAAAAATTAGCAACTGGC------GCT---GGTACTGCA---GTA---GCA---TCT---GCG---AAT---GCA---GCATTA---GGTTGGTTCGTTTTAGTT---------------------------------------------------------------GGTTGG---------GCCATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLMCVEFYLITKK---A--GGTI-GL------------LWK-MILASVVMLVTGYWGE---A------V--AP--------------------------------AQA------TLW-GTISAIAYFYIVYEV-----W--L-GDVKKLATG--A-GTA-V-A-S-A-N-A-AL-GWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_EU328200 [II-CFB-AAA027E17] clone_PS350-27_EU328200 gi|164600752|gb|EU328200| Uncultured bacterium clone PS350-27 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PS350-27 putative proteorhodopsin gene, partial cds. EU328200 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 15-janv-08 01-juin-07 Damariscotta Lake water 1 m depth Atlantic Ocean freshwater 44.105494 -69.473356 Bacteriorhodopsin presence in freshwater lakes Stepanauskas,R. and Sieracki,M.E. Unpublished #na #na TATGTGGACTGGTTATCGACTGTGCCTTTAATGCGTGTTGAATTCTATTTAATCACAAAGAAAGCAGGCGGTACAATAGGTTTATTATGGAAGATGATTTTAGCTTCTGTTGTAATGTTAGTTACAGGTTATTGGGGAGAGGCTGTTGCCCCAGCTCAGGCTACATTATGGGGAACTATAAGTGCTATCGCTTACTTCTACATTGTGTATGAAGTATGGTTAGGAGATGTTGAAAAATTAGCAACTGGCGCTGGTACTGCAGTAGCATCTGCGAATGCAGCATTAGGTTGGTTCGTTTTAGTTGGTTGGGCAATTTATCC YVDWLSTVPLMRVEFYLITKKAGGTIGLLWKMILASVVMLVTGYWGEAVAPAQATLWGTISAIAYFYIVYEVWLGDVEKLATGAGTAVASANAALGWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTGGACTGG------------------------TTATCGACTGTGCCTTTAATGCGTGTTGAATTCTATTTAATCACAAAGAAA---------GCA------GGCGGTACAATA---GGTTTA------------------------------------TTATGGAAG---ATGATTTTAGCTTCTGTTGTAATGTTAGTTACAGGTTATTGGGGAGAG---------GCT------------------GTT------GCCCCA------------------------------------------------------------------------------------------------GCTCAGGCT------------------ACATTATGG---GGAACTATAAGTGCTATCGCTTACTTCTACATTGTGTATGAAGTA---------------TGG------TTA---GGAGATGTTGAAAAATTAGCAACTGGC------GCT---GGTACTGCA---GTA---GCA---TCT---GCG---AAT---GCA---GCATTA---GGTTGGTTCGTTTTAGTT---------------------------------------------------------------GGTTGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LSTVPLMRVEFYLITKK---A--GGTI-GL------------LWK-MILASVVMLVTGYWGE---A------V--AP--------------------------------AQA------TLW-GTISAIAYFYIVYEV-----W--L-GDVEKLATG--A-GTA-V-A-S-A-N-A-AL-GWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_EU328207 [II-CFB-AAA027E17] clone_PS350-37_EU328207 gi|164600765|gb|EU328207| Uncultured bacterium clone PS350-37 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PS350-37 putative proteorhodopsin gene, partial cds. EU328207 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 15-janv-08 01-juin-07 Damariscotta Lake water 1 m depth Atlantic Ocean freshwater 44.105494 -69.473356 Bacteriorhodopsin presence in freshwater lakes Stepanauskas,R. and Sieracki,M.E. Unpublished #na #na TATGTGGACTGGTTATTGACTGTGCCTTTAATGTGTGTTGAATTCTATTTAATCACAAAGAAAGCAGGCGGTACAATAGGTTTATTATGGAAGATGATTTTAGCTTCTGTTGTAATGTTAGTTACAGGTTATTGGGGAGAGGCTGTTGCCCCAGCTCAAGCTACATTATGGGGAACTATAAGTGCTATCGCTTACTTCTACATTGTGTATGAAGTATGGTTAGGAGATGTTAAAAAATTAGCAACTGGCGCTGGTACTGCAGTAGCATCTGCGAATGCAGCATTAGGTTGGTTCGTTTTAGTTGGTTGGGCCATTTACCC YVDWLLTVPLMCVEFYLITKKAGGTIGLLWKMILASVVMLVTGYWGEAVAPAQATLWGTISAIAYFYIVYEVWLGDVKKLATGAGTAVASANAALGWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTGGACTGG------------------------TTATTGACTGTGCCTTTAATGTGTGTTGAATTCTATTTAATCACAAAGAAA---------GCA------GGCGGTACAATA---GGTTTA------------------------------------TTATGGAAG---ATGATTTTAGCTTCTGTTGTAATGTTAGTTACAGGTTATTGGGGAGAG---------GCT------------------GTT------GCCCCA------------------------------------------------------------------------------------------------GCTCAAGCT------------------ACATTATGG---GGAACTATAAGTGCTATCGCTTACTTCTACATTGTGTATGAAGTA---------------TGG------TTA---GGAGATGTTAAAAAATTAGCAACTGGC------GCT---GGTACTGCA---GTA---GCA---TCT---GCG---AAT---GCA---GCATTA---GGTTGGTTCGTTTTAGTT---------------------------------------------------------------GGTTGG---------GCCATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLMCVEFYLITKK---A--GGTI-GL------------LWK-MILASVVMLVTGYWGE---A------V--AP--------------------------------AQA------TLW-GTISAIAYFYIVYEV-----W--L-GDVKKLATG--A-GTA-V-A-S-A-N-A-AL-GWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_EU328203 [II-CFB-AAA027E17] clone_PS350-30_EU328203 gi|164600758|gb|EU328203| Uncultured bacterium clone PS350-30 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PS350-30 putative proteorhodopsin gene, partial cds. EU328203 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 15-janv-08 01-juin-07 Damariscotta Lake water 1 m depth Atlantic Ocean freshwater 44.105494 -69.473356 Bacteriorhodopsin presence in freshwater lakes Stepanauskas,R. and Sieracki,M.E. Unpublished #na #na TACGTCGACTGGTTATTGACTGTGCCTCTAATGTGTGTTGAATTCTATTTAATCACAAAGAAAGCAGGCGGTACTATAGGTTTATTATGGAAGATGATTTTAGCTTCTGTAGTAATGTTAGTTACAGGTTATTGGGGAGAGGCTGTTGCCCCAGCTCAAGCTACATTATGGGGAACTATAAGTGCTATCGCTTACTTCTACATTGTGTATGAAGTATGGATGGGAGATGTTAAGAAATTAGCCACTGGCGCTGGTACTGCAGTAGCATCTGCGAATGCAGCATTAGGTTGGTTCGTTTTAGTTGGTTGGGCCATATACCC YVDWLLTVPLMCVEFYLITKKAGGTIGLLWKMILASVVMLVTGYWGEAVAPAQATLWGTISAIAYFYIVYEVWMGDVKKLATGAGTAVASANAALGWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACGTCGACTGG------------------------TTATTGACTGTGCCTCTAATGTGTGTTGAATTCTATTTAATCACAAAGAAA---------GCA------GGCGGTACTATA---GGTTTA------------------------------------TTATGGAAG---ATGATTTTAGCTTCTGTAGTAATGTTAGTTACAGGTTATTGGGGAGAG---------GCT------------------GTT------GCCCCA------------------------------------------------------------------------------------------------GCTCAAGCT------------------ACATTATGG---GGAACTATAAGTGCTATCGCTTACTTCTACATTGTGTATGAAGTA---------------TGG------ATG---GGAGATGTTAAGAAATTAGCCACTGGC------GCT---GGTACTGCA---GTA---GCA---TCT---GCG---AAT---GCA---GCATTA---GGTTGGTTCGTTTTAGTT---------------------------------------------------------------GGTTGG---------GCCATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLMCVEFYLITKK---A--GGTI-GL------------LWK-MILASVVMLVTGYWGE---A------V--AP--------------------------------AQA------TLW-GTISAIAYFYIVYEV-----W--M-GDVKKLATG--A-GTA-V-A-S-A-N-A-AL-GWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_EU328198 [II-CFB-AAA027E17] clone_PS350-21_EU328198 gi|164600749|gb|EU328198| Uncultured bacterium clone PS350-21 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PS350-21 putative proteorhodopsin gene, partial cds. EU328198 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 15-janv-08 01-juin-07 Damariscotta Lake water 1 m depth Atlantic Ocean freshwater 44.105494 -69.473356 Bacteriorhodopsin presence in freshwater lakes Stepanauskas,R. and Sieracki,M.E. Unpublished #na #na TATGTTGACTGGTTATTGACTGTGCCTTTAATGTGTGTTGAATTCTATTTAATCACAGAGAAAGCAGGCGGTACAATAGGTTTATTATGGAAGATGATTTTAGCTTCTGTTGTAATGTTAGTTACAGGTTATTGGGGAGAGGCTGTTGCCCCAGCTCAAGCTACATTATGGGGAACTATAAGTGCTATCGCTTACTTCTACATTGTGTATGAAGTATGGTTAGGAGATGTTAAAAAATTAGCAACTGGCGCTGGTACTGCAGTAGCATCTGCGAATGCAGCATTAGGTTGGTTCGTTTTAGTTGGTTGGGCCATTTACCC YVDWLLTVPLMCVEFYLITEKAGGTIGLLWKMILASVVMLVTGYWGEAVAPAQATLWGTISAIAYFYIVYEVWLGDVKKLATGAGTAVASANAALGWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTTGACTGG------------------------TTATTGACTGTGCCTTTAATGTGTGTTGAATTCTATTTAATCACAGAGAAA---------GCA------GGCGGTACAATA---GGTTTA------------------------------------TTATGGAAG---ATGATTTTAGCTTCTGTTGTAATGTTAGTTACAGGTTATTGGGGAGAG---------GCT------------------GTT------GCCCCA------------------------------------------------------------------------------------------------GCTCAAGCT------------------ACATTATGG---GGAACTATAAGTGCTATCGCTTACTTCTACATTGTGTATGAAGTA---------------TGG------TTA---GGAGATGTTAAAAAATTAGCAACTGGC------GCT---GGTACTGCA---GTA---GCA---TCT---GCG---AAT---GCA---GCATTA---GGTTGGTTCGTTTTAGTT---------------------------------------------------------------GGTTGG---------GCCATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLMCVEFYLITEK---A--GGTI-GL------------LWK-MILASVVMLVTGYWGE---A------V--AP--------------------------------AQA------TLW-GTISAIAYFYIVYEV-----W--L-GDVKKLATG--A-GTA-V-A-S-A-N-A-AL-GWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_EU328189 [II-CFB-AAA027E17] clone_PS350-10_EU328189 gi|164600734|gb|EU328189| Uncultured bacterium clone PS350-10 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PS350-10 putative proteorhodopsin gene, partial cds. EU328189 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; na light-energy conversion (ion transport) unknown [Bacteria/environmental samples] taxon:77133 genomic DNA other 15-janv-08 01-juin-07 Damariscotta Lake water 1 m depth Atlantic Ocean freshwater 44.105494 -69.473356 Bacteriorhodopsin presence in freshwater lakes Stepanauskas,R. and Sieracki,M.E. Unpublished #na #na TATTTAATCACAAAGAAAGCAGGCGGTACTATAGGTTTATTATGGAAAATGATTTTAGCTTCTGTTGTAATGTTAGTTACAGGTTATTGGGGAGAGGCTGTTGCCCCAGCTCAAGCTACATTATGGGGAACTATAAGTGCTATCGCTTACTTCTACATTGTGTATGAAGTATGGTTAGGAGATGTTAAAAAATTGGCAACTGGAGCTGGTTCTGCAGTAGCATCTGCTAATTCAGCATTGGGTTGGTTCGTTTTAGTTGGTTGGGCTATATAT YLITKKAGGTIGLLWKMILASVVMLVTGYWGEAVAPAQATLWGTISAIAYFYIVYEVWLGDVKKLATGAGSAVASANSALGWFVLVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTAATCACAAAGAAA---------GCA------GGCGGTACTATA---GGTTTA------------------------------------TTATGGAAA---ATGATTTTAGCTTCTGTTGTAATGTTAGTTACAGGTTATTGGGGAGAG---------GCT------------------GTT------GCCCCA------------------------------------------------------------------------------------------------GCTCAAGCT------------------ACATTATGG---GGAACTATAAGTGCTATCGCTTACTTCTACATTGTGTATGAAGTA---------------TGG------TTA---GGAGATGTTAAAAAATTGGCAACTGGA------GCT---GGTTCTGCA---GTA---GCA---TCT---GCT---AAT---TCA---GCATTG---GGTTGGTTCGTTTTAGTT---------------------------------------------------------------GGTTGG---------GCTATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YLITKK---A--GGTI-GL------------LWK-MILASVVMLVTGYWGE---A------V--AP--------------------------------AQA------TLW-GTISAIAYFYIVYEV-----W--L-GDVKKLATG--A-GSA-V-A-S-A-N-S-AL-GWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_EU328194 [II-CFB-AAA027E17] clone_PS350-16_EU328194 gi|164600744|gb|EU328194| Uncultured bacterium clone PS350-16 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PS350-16 putative proteorhodopsin gene, partial cds. EU328194 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 15-janv-08 01-juin-07 Damariscotta Lake water 1 m depth Atlantic Ocean freshwater 44.105494 -69.473356 Bacteriorhodopsin presence in freshwater lakes Stepanauskas,R. and Sieracki,M.E. Unpublished #na #na TACGTGGACTGGTTATTAACTGTGCCTTTAATGTGTGTTGAATTCTATTTAATCACAAAAAAAGCAGGTGGTACAACAAGTTTATTATGGAAAATGATTTTAGCTTCTGTTGTAATGTTAGTAACAGGTTATTGGGGTGAGGCAGTTGCCCCAGCTCAAGCTACATTATGGGGAACTATAAGTGCTATCGCTTACTTCTATATTGTATATGAAGTATGGATGGGAGATGTTAAAAAATTAGCAACTGGCGCTGGTACTGCAGTAGCATCTGCAAATGCAGCATTAGGTTGGTTCGTTTTAGTGGGGTGGGCCATTTACCC YVDWLLTVPLMCVEFYLITKKAGGTTSLLWKMILASVVMLVTGYWGEAVAPAQATLWGTISAIAYFYIVYEVWMGDVKKLATGAGTAVASANAALGWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACGTGGACTGG------------------------TTATTAACTGTGCCTTTAATGTGTGTTGAATTCTATTTAATCACAAAAAAA---------GCA------GGTGGTACAACA---AGTTTA------------------------------------TTATGGAAA---ATGATTTTAGCTTCTGTTGTAATGTTAGTAACAGGTTATTGGGGTGAG---------GCA------------------GTT------GCCCCA------------------------------------------------------------------------------------------------GCTCAAGCT------------------ACATTATGG---GGAACTATAAGTGCTATCGCTTACTTCTATATTGTATATGAAGTA---------------TGG------ATG---GGAGATGTTAAAAAATTAGCAACTGGC------GCT---GGTACTGCA---GTA---GCA---TCT---GCA---AAT---GCA---GCATTA---GGTTGGTTCGTTTTAGTG---------------------------------------------------------------GGGTGG---------GCCATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLMCVEFYLITKK---A--GGTT-SL------------LWK-MILASVVMLVTGYWGE---A------V--AP--------------------------------AQA------TLW-GTISAIAYFYIVYEV-----W--M-GDVKKLATG--A-GTA-V-A-S-A-N-A-AL-GWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_EU328202 [II-CFB-AAA027E17] clone_PS350-3_EU328202 gi|164600756|gb|EU328202| Uncultured bacterium clone PS350-3 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PS350-3 putative proteorhodopsin gene, partial cds. EU328202 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 15-janv-08 01-juin-07 Damariscotta Lake water 1 m depth Atlantic Ocean freshwater 44.105494 -69.473356 Bacteriorhodopsin presence in freshwater lakes Stepanauskas,R. and Sieracki,M.E. Unpublished #na #na TACGTAGACTGGTTATTAACTGTGCCTTTAATGTGTGTTGAATTCTATTTAATCACAAAAAAAGCAGGTGGTACTATTGGTTTATTATGGAAAATGATTTTAGCTTCTGTTGTAATGTTAGTTACAGGTTATTGGGGTGAGGCAGTTGCCCCAGCTCAAGCTACATTATGGGGAACTATAAGTGCTATCGCTTACTTCTATATTGTTTATGAAGTATGGATGGGAGATGTTAAGAAATTAGCAACTGGCGCTGGTGCTGCAGTAGCATCTGCAAATGCAGCATTAGGTTGGTTCGTTTTAGTTGGTTGGGCAATATATCC YVDWLLTVPLMCVEFYLITKKAGGTIGLLWKMILASVVMLVTGYWGEAVAPAQATLWGTISAIAYFYIVYEVWMGDVKKLATGAGAAVASANAALGWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACGTAGACTGG------------------------TTATTAACTGTGCCTTTAATGTGTGTTGAATTCTATTTAATCACAAAAAAA---------GCA------GGTGGTACTATT---GGTTTA------------------------------------TTATGGAAA---ATGATTTTAGCTTCTGTTGTAATGTTAGTTACAGGTTATTGGGGTGAG---------GCA------------------GTT------GCCCCA------------------------------------------------------------------------------------------------GCTCAAGCT------------------ACATTATGG---GGAACTATAAGTGCTATCGCTTACTTCTATATTGTTTATGAAGTA---------------TGG------ATG---GGAGATGTTAAGAAATTAGCAACTGGC------GCT---GGTGCTGCA---GTA---GCA---TCT---GCA---AAT---GCA---GCATTA---GGTTGGTTCGTTTTAGTT---------------------------------------------------------------GGTTGG---------GCAATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLMCVEFYLITKK---A--GGTI-GL------------LWK-MILASVVMLVTGYWGE---A------V--AP--------------------------------AQA------TLW-GTISAIAYFYIVYEV-----W--M-GDVKKLATG--A-GAA-V-A-S-A-N-A-AL-GWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_EU328190 [II-CFB-AAA027E17] clone_PS350-12_EU328190 gi|164600736|gb|EU328190| Uncultured bacterium clone PS350-12 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PS350-12 putative proteorhodopsin gene, partial cds. EU328190 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 15-janv-08 01-juin-07 Damariscotta Lake water 1 m depth Atlantic Ocean freshwater 44.105494 -69.473356 Bacteriorhodopsin presence in freshwater lakes Stepanauskas,R. and Sieracki,M.E. Unpublished #na #na TATGTGGACTGGTTATTAACTGTGCCTTTAATGTGTGTTGAATTCTATTTAATCACAAAAAAAGCAGGTGGTACTACAAGTTTATTGTGGAAAATGATATTAGCTTCTGTTGTAATGTTAGTTACAGGATATTGGGGAGAGGCTGTTGCCCCAGCTCAAGCAACATTATGGGGAACTTTAAGTGCTATCGCTTACTTCTACATCGTATATGAAGTTTGGATGGGAGATGTTAAGAAATTAGCCACTGGAGCAGGCACAGCAGTAGCATCTGCTAATGCGGCACTAGGTTGGTTCGTTTTAGTTGGTTGGGCTATCTATCC YVDWLLTVPLMCVEFYLITKKAGGTTSLLWKMILASVVMLVTGYWGEAVAPAQATLWGTLSAIAYFYIVYEVWMGDVKKLATGAGTAVASANAALGWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTGGACTGG------------------------TTATTAACTGTGCCTTTAATGTGTGTTGAATTCTATTTAATCACAAAAAAA---------GCA------GGTGGTACTACA---AGTTTA------------------------------------TTGTGGAAA---ATGATATTAGCTTCTGTTGTAATGTTAGTTACAGGATATTGGGGAGAG---------GCT------------------GTT------GCCCCA------------------------------------------------------------------------------------------------GCTCAAGCA------------------ACATTATGG---GGAACTTTAAGTGCTATCGCTTACTTCTACATCGTATATGAAGTT---------------TGG------ATG---GGAGATGTTAAGAAATTAGCCACTGGA------GCA---GGCACAGCA---GTA---GCA---TCT---GCT---AAT---GCG---GCACTA---GGTTGGTTCGTTTTAGTT---------------------------------------------------------------GGTTGG---------GCTATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLMCVEFYLITKK---A--GGTT-SL------------LWK-MILASVVMLVTGYWGE---A------V--AP--------------------------------AQA------TLW-GTLSAIAYFYIVYEV-----W--M-GDVKKLATG--A-GTA-V-A-S-A-N-A-AL-GWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_EU328201 [II-CFB-AAA027E17] clone_PS350-28_EU328201 gi|164600754|gb|EU328201| Uncultured bacterium clone PS350-28 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PS350-28 putative proteorhodopsin gene, partial cds. EU328201 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 15-janv-08 01-juin-07 Damariscotta Lake water 1 m depth Atlantic Ocean freshwater 44.105494 -69.473356 Bacteriorhodopsin presence in freshwater lakes Stepanauskas,R. and Sieracki,M.E. Unpublished #na #na TATGTGGATTGGTTATTGACTGTGCCTTTGATGTGTGTTGAATTCTATTTAATCACAAAAAAAGCAGGTGGTACAACGAGTTTATTATGGAAAATGATTTTAGCATCTGTTGTAATGTTAGTTACAGGTTATTGGGGAGAGGCTGTTGCCCCAGCTCAAGCTACATTATGGGGAACTTTAAGTGCTGCCGCTTACTTCTACATTGTATATGAAGTATGGTTAGGAGATGTTAAGAAATTAGCAATTTCAGCTGGTACTGCAGTAGCATCTGCAAATGCAGCATTGGGTTGGTTCGTATTAGTTGGTTGGGCAATTTACCC YVDWLLTVPLMCVEFYLITKKAGGTTSLLWKMILASVVMLVTGYWGEAVAPAQATLWGTLSAAAYFYIVYEVWLGDVKKLAISAGTAVASANAALGWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTGGATTGG------------------------TTATTGACTGTGCCTTTGATGTGTGTTGAATTCTATTTAATCACAAAAAAA---------GCA------GGTGGTACAACG---AGTTTA------------------------------------TTATGGAAA---ATGATTTTAGCATCTGTTGTAATGTTAGTTACAGGTTATTGGGGAGAG---------GCT------------------GTT------GCCCCA------------------------------------------------------------------------------------------------GCTCAAGCT------------------ACATTATGG---GGAACTTTAAGTGCTGCCGCTTACTTCTACATTGTATATGAAGTA---------------TGG------TTA---GGAGATGTTAAGAAATTAGCAATTTCA------GCT---GGTACTGCA---GTA---GCA---TCT---GCA---AAT---GCA---GCATTG---GGTTGGTTCGTATTAGTT---------------------------------------------------------------GGTTGG---------GCAATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLMCVEFYLITKK---A--GGTT-SL------------LWK-MILASVVMLVTGYWGE---A------V--AP--------------------------------AQA------TLW-GTLSAAAYFYIVYEV-----W--L-GDVKKLAIS--A-GTA-V-A-S-A-N-A-AL-GWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_EU328212 [II-CFB-AAA027E17] clone_PS350-46_EU328212 gi|164600773|gb|EU328212| Uncultured bacterium clone PS350-46 putative proteorhodopsin pseudogene, partial sequence. Uncultured bacterium clone PS350-46 putative proteorhodopsin pseudogene, partial sequence. EU328212 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 15-janv-08 01-juin-07 Damariscotta Lake water 1 m depth Atlantic Ocean freshwater 44.105494 -69.473356 Bacteriorhodopsin presence in freshwater lakes Stepanauskas,R. and Sieracki,M.E. Unpublished #na #na TATGTTGACTGGTTATTGACTGTGCCTTTGATGTGTGTTGAATTCTATTTAATCACAAAAAAAGCAGGTGGTACAACGAGTTTATTATGGAAAATGATTTTAGCATCTGTTGTAATGTTAGTTACAGGTTATTGGGGAGAGGCTGTTGCCCCAGCTCAAGCTACATTATGGGGAACTTTAAGTGCTGCCGCTTACTTCTACATTGTATATGAAGTATGGTTAGGAGATGTTAAGAAATTAGCAACTTCAGCTGGTACTGCAGTAGCATCTGCAAATGCAGCATTGGGTTGGTTCGTATTAGTTGGTTGGGCGATTTTATCC YVDWLLTVPLMCVEFYLITKKAGGTTSLLWKMILASVVMLVTGYWGEAVAPAQATLWGTLSAAAYFYIVYEVWLGDVKKLATSAGTAVASANAALGWFVLVGWAILS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTTGACTGG------------------------TTATTGACTGTGCCTTTGATGTGTGTTGAATTCTATTTAATCACAAAAAAA---------GCA------GGTGGTACAACG---AGTTTA------------------------------------TTATGGAAA---ATGATTTTAGCATCTGTTGTAATGTTAGTTACAGGTTATTGGGGAGAG---------GCT------------------GTT------GCCCCA------------------------------------------------------------------------------------------------GCTCAAGCT------------------ACATTATGG---GGAACTTTAAGTGCTGCCGCTTACTTCTACATTGTATATGAAGTA---------------TGG------TTA---GGAGATGTTAAGAAATTAGCAACTTCA------GCT---GGTACTGCA---GTA---GCA---TCT---GCA---AAT---GCA---GCATTG---GGTTGGTTCGTATTAGTT---------------------------------------------------------------GGTTGG---------GCGATTTTATCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLMCVEFYLITKK---A--GGTT-SL------------LWK-MILASVVMLVTGYWGE---A------V--AP--------------------------------AQA------TLW-GTLSAAAYFYIVYEV-----W--L-GDVKKLATS--A-GTA-V-A-S-A-N-A-AL-GWFVLV---------------------GW---AILS-------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_EU328192 [II-CFB-AAA027E17] clone_PS350-14_EU328192 gi|164600740|gb|EU328192| Uncultured bacterium clone PS350-14 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PS350-14 putative proteorhodopsin gene, partial cds. EU328192 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 15-janv-08 01-juin-07 Damariscotta Lake water 1 m depth Atlantic Ocean freshwater 44.105494 -69.473356 Bacteriorhodopsin presence in freshwater lakes Stepanauskas,R. and Sieracki,M.E. Unpublished #na #na TATGTGGACTGGTTATTGACTGTGCCTTTGATGTGTGTTGAATTCTATTTAATCACAAAAAAAGCAGGTGGTACAACAAGTTTATTATGGAAAATGATTTTAGCATCTGTTGTAATGTTAGTTACAGGTTATTGGGGAGAGGCTGTTGCCCCAGCTCAAGCTACATTATGGGGAACTTTAAGTGCTGCCGCTTACTTCTACATTGTATATGAAGTATGGTTAGGAGATGTTAAGAAATTAGCAACTTCAGCTGGTACTGCAGTAGCATCTGCAAATGCAGCATTGGGTTGGTTTGTATTAGTTGGTTGGGCGATTTACCC YVDWLLTVPLMCVEFYLITKKAGGTTSLLWKMILASVVMLVTGYWGEAVAPAQATLWGTLSAAAYFYIVYEVWLGDVKKLATSAGTAVASANAALGWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTGGACTGG------------------------TTATTGACTGTGCCTTTGATGTGTGTTGAATTCTATTTAATCACAAAAAAA---------GCA------GGTGGTACAACA---AGTTTA------------------------------------TTATGGAAA---ATGATTTTAGCATCTGTTGTAATGTTAGTTACAGGTTATTGGGGAGAG---------GCT------------------GTT------GCCCCA------------------------------------------------------------------------------------------------GCTCAAGCT------------------ACATTATGG---GGAACTTTAAGTGCTGCCGCTTACTTCTACATTGTATATGAAGTA---------------TGG------TTA---GGAGATGTTAAGAAATTAGCAACTTCA------GCT---GGTACTGCA---GTA---GCA---TCT---GCA---AAT---GCA---GCATTG---GGTTGGTTTGTATTAGTT---------------------------------------------------------------GGTTGG---------GCGATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLMCVEFYLITKK---A--GGTT-SL------------LWK-MILASVVMLVTGYWGE---A------V--AP--------------------------------AQA------TLW-GTLSAAAYFYIVYEV-----W--L-GDVKKLATS--A-GTA-V-A-S-A-N-A-AL-GWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_EU328215 [II-CFB-AAA027E17] clone_PS350-9_EU328215 gi|164600777|gb|EU328215| Uncultured bacterium clone PS350-9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PS350-9 putative proteorhodopsin gene, partial cds. EU328215 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 15-janv-08 01-juin-07 Damariscotta Lake water 1 m depth Atlantic Ocean freshwater 44.105494 -69.473356 Bacteriorhodopsin presence in freshwater lakes Stepanauskas,R. and Sieracki,M.E. Unpublished #na #na TATGTGGACTGGTTATTGACTGTGCCTTTGATGTGTGTTGAATTCTATTTAATCACAAAAAAAGCAGGTGGTACAACAAGTTTATTATGGAAAATGATTTTAGCATCTGTTGTAACGTTAGTTACAGGTTATTGGGGAGAGGCTGTTGCCCCAGCTCAAGCTACATTATGGGGAACTTTAAGTGCTGCCGCTTACTTCTACATTGTATATGAAGTATGGTTAGGAGATGTTAAGAAATTAGCAACTTCAGCTGGTACTGCAGTAGCATCTGCAAATGCAGCATTGGGTTGGTTCGTATTAGTTGGTTGGGCCATATACCC YVDWLLTVPLMCVEFYLITKKAGGTTSLLWKMILASVVTLVTGYWGEAVAPAQATLWGTLSAAAYFYIVYEVWLGDVKKLATSAGTAVASANAALGWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTGGACTGG------------------------TTATTGACTGTGCCTTTGATGTGTGTTGAATTCTATTTAATCACAAAAAAA---------GCA------GGTGGTACAACA---AGTTTA------------------------------------TTATGGAAA---ATGATTTTAGCATCTGTTGTAACGTTAGTTACAGGTTATTGGGGAGAG---------GCT------------------GTT------GCCCCA------------------------------------------------------------------------------------------------GCTCAAGCT------------------ACATTATGG---GGAACTTTAAGTGCTGCCGCTTACTTCTACATTGTATATGAAGTA---------------TGG------TTA---GGAGATGTTAAGAAATTAGCAACTTCA------GCT---GGTACTGCA---GTA---GCA---TCT---GCA---AAT---GCA---GCATTG---GGTTGGTTCGTATTAGTT---------------------------------------------------------------GGTTGG---------GCCATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLMCVEFYLITKK---A--GGTT-SL------------LWK-MILASVVTLVTGYWGE---A------V--AP--------------------------------AQA------TLW-GTLSAAAYFYIVYEV-----W--L-GDVKKLATS--A-GTA-V-A-S-A-N-A-AL-GWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_EU328213 [II-CFB-AAA027E17] clone_PS350-5_EU328213 gi|164600774|gb|EU328213| Uncultured bacterium clone PS350-5 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PS350-5 putative proteorhodopsin gene, partial cds. EU328213 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 15-janv-08 01-juin-07 Damariscotta Lake water 1 m depth Atlantic Ocean freshwater 44.105494 -69.473356 Bacteriorhodopsin presence in freshwater lakes Stepanauskas,R. and Sieracki,M.E. Unpublished #na #na TATGTGGACTGGTTATTGACTGTGCCTTTGATGTGTGTTGAATTCTATTTAATCACAAAAAAAGCAGGTGGTACAACAAGTTTATTATGGAAAATGATTTTAGCATCTGTTGTAATGTTAGTTACAGGTTATTGGGGAGAGGCTGTTGCCCCAGCTCAAGCTACATTATGGGGAACTTTAAGTGCTGCCGCTTACTTCTACATTGTATATGAAGTATGGTTAGGAGATGTTAAGAAATTAGCAACTTCAGCTGGTACTGCAGTAGCATCTGCAAATGCAGCATTGGGTTGGTTCGTATTAGTTGGATGGGCCATTTATCC YVDWLLTVPLMCVEFYLITKKAGGTTSLLWKMILASVVMLVTGYWGEAVAPAQATLWGTLSAAAYFYIVYEVWLGDVKKLATSAGTAVASANAALGWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTGGACTGG------------------------TTATTGACTGTGCCTTTGATGTGTGTTGAATTCTATTTAATCACAAAAAAA---------GCA------GGTGGTACAACA---AGTTTA------------------------------------TTATGGAAA---ATGATTTTAGCATCTGTTGTAATGTTAGTTACAGGTTATTGGGGAGAG---------GCT------------------GTT------GCCCCA------------------------------------------------------------------------------------------------GCTCAAGCT------------------ACATTATGG---GGAACTTTAAGTGCTGCCGCTTACTTCTACATTGTATATGAAGTA---------------TGG------TTA---GGAGATGTTAAGAAATTAGCAACTTCA------GCT---GGTACTGCA---GTA---GCA---TCT---GCA---AAT---GCA---GCATTG---GGTTGGTTCGTATTAGTT---------------------------------------------------------------GGATGG---------GCCATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLMCVEFYLITKK---A--GGTT-SL------------LWK-MILASVVMLVTGYWGE---A------V--AP--------------------------------AQA------TLW-GTLSAAAYFYIVYEV-----W--L-GDVKKLATS--A-GTA-V-A-S-A-N-A-AL-GWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_EU328208 [II-CFB-AAA027E17] clone_PS350-38_EU328208 gi|164600767|gb|EU328208| Uncultured bacterium clone PS350-38 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PS350-38 putative proteorhodopsin gene, partial cds. EU328208 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 15-janv-08 01-juin-07 Damariscotta Lake water 1 m depth Atlantic Ocean freshwater 44.105494 -69.473356 Bacteriorhodopsin presence in freshwater lakes Stepanauskas,R. and Sieracki,M.E. Unpublished #na #na TACGTGGACTGGTTATTGACTGTGCCTTCGATGTGTGTTGAGTTCTATTTAATCACAAAAAAAGCAGGTGGTACAACAAGTTTATTATGGAAAATGATTTTAGCATCTGTTGTAATGTTAGTTACAGGTTATTGGGGAGAGGCTGTTGCCCCAGCTCAAGCTACATTATGGGGAACTTTAAGTGCTGCCGCTTACTTCTACATTGTATATGAAGTATGGTTAGGAGATGTTAAGAAATTAGCAACTTCGGCTGGTACTGCAGTAGCATCTGCAAATGCAGCATTGGGTTGGTTCGTATTAGTTGGTTGGGCCATTTACCC YVDWLLTVPSMCVEFYLITKKAGGTTSLLWKMILASVVMLVTGYWGEAVAPAQATLWGTLSAAAYFYIVYEVWLGDVKKLATSAGTAVASANAALGWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACGTGGACTGG------------------------TTATTGACTGTGCCTTCGATGTGTGTTGAGTTCTATTTAATCACAAAAAAA---------GCA------GGTGGTACAACA---AGTTTA------------------------------------TTATGGAAA---ATGATTTTAGCATCTGTTGTAATGTTAGTTACAGGTTATTGGGGAGAG---------GCT------------------GTT------GCCCCA------------------------------------------------------------------------------------------------GCTCAAGCT------------------ACATTATGG---GGAACTTTAAGTGCTGCCGCTTACTTCTACATTGTATATGAAGTA---------------TGG------TTA---GGAGATGTTAAGAAATTAGCAACTTCG------GCT---GGTACTGCA---GTA---GCA---TCT---GCA---AAT---GCA---GCATTG---GGTTGGTTCGTATTAGTT---------------------------------------------------------------GGTTGG---------GCCATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPSMCVEFYLITKK---A--GGTT-SL------------LWK-MILASVVMLVTGYWGE---A------V--AP--------------------------------AQA------TLW-GTLSAAAYFYIVYEV-----W--L-GDVKKLATS--A-GTA-V-A-S-A-N-A-AL-GWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_JX863186 [II-CFB-AAA027E17] MALINA_OTU24_270_M_env_samples_JX863186 gi|425477322|gb|JX863186| Uncultured bacterium clone MALINA OTU24 270 M putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU24 270 M putative proteorhodopsin gene, partial cds JX863186 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 13Aug2009 0m_depth Arctic Ocean marine 69.25 -137.2 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTATTGACTGTGCCTTTAATGTGTGTTGAATTCTATTTGATCACTAAAAAAGCAGGCGGTACTACAAGTTTATTATGGAAAATGATTTTAGCTTCTGTTGTAATGTTAGTTACAGGATATTGGGGAGAAGCAGTTGCTCCTGCTCAAGCAACATTATGGGGAACTATAAGTGCTATTGCTTACTTCTACATTGTATATGAAGTATGGTTAGGAGATGTTAAGAAATTAGCAACAAACGCTGGTTCTGCAGTAGCTTCTGCAAATAAAGCACTAGGTTGGTTTATTTTAGTT WLLTVPLMCVEFYLITKKAGGTTSLLWKMILASVVMLVTGYWGEAVAPAQATLWGTISAIAYFYIVYEVWLGDVKKLATNAGSAVASANKALGWFILV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTATTGACTGTGCCTTTAATGTGTGTTGAATTCTATTTGATCACTAAAAAA---------GCA------GGCGGTACTACA---AGTTTA------------------------------------TTATGGAAA---ATGATTTTAGCTTCTGTTGTAATGTTAGTTACAGGATATTGGGGAGAA---------GCA------------------GTT------GCTCCT------------------------------------------------------------------------------------------------GCTCAAGCA------------------ACATTATGG---GGAACTATAAGTGCTATTGCTTACTTCTACATTGTATATGAAGTA---------------TGG------TTA---GGAGATGTTAAGAAATTAGCAACAAAC------GCT---GGTTCTGCA---GTA---GCT---TCT---GCA---AAT---AAA---GCACTA---GGTTGGTTTATTTTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLMCVEFYLITKK---A--GGTT-SL------------LWK-MILASVVMLVTGYWGE---A------V--AP--------------------------------AQA------TLW-GTISAIAYFYIVYEV-----W--L-GDVKKLATN--A-GSA-V-A-S-A-N-K-AL-GWFILV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_JX863187 [II-CFB-AAA027E17] MALINA_OTU24_466_M_env_samples_JX863187 gi|425477324|gb|JX863187| Uncultured bacterium clone MALINA OTU24 466 M putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU24 466 M putative proteorhodopsin gene, partial cds JX863187 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 13Aug2009 0m_depth Arctic Ocean marine 69.25 -137.2 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTATTGACTGTGCCTTTAATGTGTGTTGAATTCTATTTGATCACTAAAAAAGCAGGCGGTACTACAAGTTTATTATGGAAAACGATTTTAGCTTCTGTTGTAATGTTAGTTACAGGATATTGGGGAGAAGCAGTTGCTCCTGCTCAAGCAACATTATGGGGAACTATAAGTGCTATTGCTTACTTCTACATTGTATATGAAGTATGGTTAGGAGATGTTAAGAAATTAGCAACAAACGCTGGTTCTGCAGTAGCTTCTGCAAATAAAGCACTAGGTTGGTTTATTTTAGTT WLLTVPLMCVEFYLITKKAGGTTSLLWKTILASVVMLVTGYWGEAVAPAQATLWGTISAIAYFYIVYEVWLGDVKKLATNAGSAVASANKALGWFILV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTATTGACTGTGCCTTTAATGTGTGTTGAATTCTATTTGATCACTAAAAAA---------GCA------GGCGGTACTACA---AGTTTA------------------------------------TTATGGAAA---ACGATTTTAGCTTCTGTTGTAATGTTAGTTACAGGATATTGGGGAGAA---------GCA------------------GTT------GCTCCT------------------------------------------------------------------------------------------------GCTCAAGCA------------------ACATTATGG---GGAACTATAAGTGCTATTGCTTACTTCTACATTGTATATGAAGTA---------------TGG------TTA---GGAGATGTTAAGAAATTAGCAACAAAC------GCT---GGTTCTGCA---GTA---GCT---TCT---GCA---AAT---AAA---GCACTA---GGTTGGTTTATTTTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLMCVEFYLITKK---A--GGTT-SL------------LWK-TILASVVMLVTGYWGE---A------V--AP--------------------------------AQA------TLW-GTISAIAYFYIVYEV-----W--L-GDVKKLATN--A-GSA-V-A-S-A-N-K-AL-GWFILV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_EU328191 [II-CFB-AAA027E17] clone_PS350-13_EU328191 gi|164600738|gb|EU328191| Uncultured bacterium clone PS350-13 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PS350-13 putative proteorhodopsin gene, partial cds. EU328191 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 15-janv-08 01-juin-07 Damariscotta Lake water 1 m depth Atlantic Ocean freshwater 44.105494 -69.473356 Bacteriorhodopsin presence in freshwater lakes Stepanauskas,R. and Sieracki,M.E. Unpublished #na #na TATGTGGACTGGTTATTAACTGTGCCTTTAATGTGTGTTGAATTCTATCTAATCACTAAAAAAGCAGGTGGTACAACAAGTTTATTATGGAAAATGATTTTAGCTTCTGTTGTAATGCTTGTTACAGGTTATTGGGGAGAAGCAGTTGCTCCAGCACAAGCAACATTATGGGGAACTATAAGTGCTATCGCTTACTTCTACATCGTATATGAAGTATGGTTAGGAGATGTTAAGAAATTAGCAACTGGCGCTGGTACTGCTGTCGCTTCTGCGAATGCAGCATTAGGTTGGTTCGTTTTAGTTGGATGGGCCATTTATCC YVDWLLTVPLMCVEFYLITKKAGGTTSLLWKMILASVVMLVTGYWGEAVAPAQATLWGTISAIAYFYIVYEVWLGDVKKLATGAGTAVASANAALGWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTGGACTGG------------------------TTATTAACTGTGCCTTTAATGTGTGTTGAATTCTATCTAATCACTAAAAAA---------GCA------GGTGGTACAACA---AGTTTA------------------------------------TTATGGAAA---ATGATTTTAGCTTCTGTTGTAATGCTTGTTACAGGTTATTGGGGAGAA---------GCA------------------GTT------GCTCCA------------------------------------------------------------------------------------------------GCACAAGCA------------------ACATTATGG---GGAACTATAAGTGCTATCGCTTACTTCTACATCGTATATGAAGTA---------------TGG------TTA---GGAGATGTTAAGAAATTAGCAACTGGC------GCT---GGTACTGCT---GTC---GCT---TCT---GCG---AAT---GCA---GCATTA---GGTTGGTTCGTTTTAGTT---------------------------------------------------------------GGATGG---------GCCATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLMCVEFYLITKK---A--GGTT-SL------------LWK-MILASVVMLVTGYWGE---A------V--AP--------------------------------AQA------TLW-GTISAIAYFYIVYEV-----W--L-GDVKKLATG--A-GTA-V-A-S-A-N-A-AL-GWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_EU328205 [II-CFB-AAA027E17] clone_PS350-33_EU328205 gi|164600762|gb|EU328205| Uncultured bacterium clone PS350-33 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PS350-33 putative proteorhodopsin gene, partial cds. EU328205 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 15-janv-08 01-juin-07 Damariscotta Lake water 1 m depth Atlantic Ocean freshwater 44.105494 -69.473356 Bacteriorhodopsin presence in freshwater lakes Stepanauskas,R. and Sieracki,M.E. Unpublished #na #na TATGTGGATTGGTTATTAACTGTGCCTTTAATGTGTGTTGAATTCTATTTAATCACAAAGAAAGCAGGTGGTACTATTGGTTTATTATGGAAAATGATTTTAGCTTCTGTTGTAATGTTAGTTACAGGTTATTGGGGTGAGGCTGTTGCCCCAGCTCAAGCTACATTATGGGGAACTATAAGTGCTATCGCTTACTTCTACATCGTGTATGAAGTATGGTTAGGAGATGTTAAGAAATTAGCAACTGGTGCTGGTACTGCAGTAGCATCTGCAGATGCAGCATTAGGTTGGTTCGTATTAGTTGGTTGGGCTATATATCC YVDWLLTVPLMCVEFYLITKKAGGTIGLLWKMILASVVMLVTGYWGEAVAPAQATLWGTISAIAYFYIVYEVWLGDVKKLATGAGTAVASADAALGWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTGGATTGG------------------------TTATTAACTGTGCCTTTAATGTGTGTTGAATTCTATTTAATCACAAAGAAA---------GCA------GGTGGTACTATT---GGTTTA------------------------------------TTATGGAAA---ATGATTTTAGCTTCTGTTGTAATGTTAGTTACAGGTTATTGGGGTGAG---------GCT------------------GTT------GCCCCA------------------------------------------------------------------------------------------------GCTCAAGCT------------------ACATTATGG---GGAACTATAAGTGCTATCGCTTACTTCTACATCGTGTATGAAGTA---------------TGG------TTA---GGAGATGTTAAGAAATTAGCAACTGGT------GCT---GGTACTGCA---GTA---GCA---TCT---GCA---GAT---GCA---GCATTA---GGTTGGTTCGTATTAGTT---------------------------------------------------------------GGTTGG---------GCTATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLMCVEFYLITKK---A--GGTI-GL------------LWK-MILASVVMLVTGYWGE---A------V--AP--------------------------------AQA------TLW-GTISAIAYFYIVYEV-----W--L-GDVKKLATG--A-GTA-V-A-S-A-D-A-AL-GWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_EU915955 [II-CFB-AAA027E17] clone_14MDH-6_EU915955 gi|229358792|gb|EU915955| Uncultured bacterium clone 14MDH-6 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 14MDH-6 putative proteorhodopsin gene, partial cds. EU915955 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGCGTTCTTCTTTCTCGAGTTGAACAACACCAGTAAAGAGTGGCGTACCTCGGTACTTGTATCAGGTTTGATCACTTTTATTGCAGCTGTTCACTATTACTACATGAGAGAGTATTACCAAGAGACACAGGAATCACCAACCTTTTTCCGTTATGTAGACTGGTTATTGACTGTACCTCTAATGTGCGTAGAGTTCTACCTTATCACTAAAAAATCAGGTGGTACTACCAGCTTACTTTGGAAGATGATTCTTGCTTCTGTTGTAATGCTTGTTACAGGTTATTGGGGTGAGGCCGGACTAGGCAACGCTACCATCTGGGGAACAATCAGTGCCATCGCTTACTTCTACATTGTATATGAAGTATGGATGGGAGATGTTAAGAAACTAGCTACAAGTGCTGGTTCTGCTGTATCTGCTGCCAATTCAGCTTTAGGCTGGTTTGTGTTAGTAGGTTGGGCCATCTAT MVAATAFFFLELNNTSKEWRTSVLVSGLITFIAAVHYYYMREYYQETQESPTFFRYVDWLLTVPLMCVEFYLITKKSGGTTSLLWKMILASVVMLVTGYWGEAGLGNATIWGTISAIAYFYIVYEVWMGDVKKLATSAGSAVSAANSALGWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCGTTCTTCTTTCTCGAGTTGAACAACACCAGTAAAGAGTGGCGTACCTCGGTACTTGTATCAGGTTTGATCACTTTTATTGCAGCTGTTCACTATTACTACATGAGAGAGTATTACCAA---------------------------------------------------GAGACACAGGAATCACCAACCTTTTTCCGTTATGTAGACTGG------------------------TTATTGACTGTACCTCTAATGTGCGTAGAGTTCTACCTTATCACTAAAAAA---------TCA------GGTGGTACTACC---AGCTTA------------------------------------CTTTGGAAG---ATGATTCTTGCTTCTGTTGTAATGCTTGTTACAGGTTATTGGGGTGAG---------GCC------------------GGA------CTAGGC---------------------------------------------------------------------------------------------------AACGCT------------------ACCATCTGG---GGAACAATCAGTGCCATCGCTTACTTCTACATTGTATATGAAGTA---------------TGG------ATG---GGAGATGTTAAGAAACTAGCTACAAGT------GCT---GGTTCTGCT---GTA---TCT---GCT---GCC---AAT---TCA---GCTTTA---GGCTGGTTTGTGTTAGTA---------------------------------------------------------------GGTTGG---------GCCATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLELNNTSKEWRTSVLVSGLITFIAAVHYYYMREYYQ-----------------ETQESPTFFRYVDW--------LLTVPLMCVEFYLITKK---S--GGTT-SL------------LWK-MILASVVMLVTGYWGE---A------G--LG---------------------------------NA------TIW-GTISAIAYFYIVYEV-----W--M-GDVKKLATS--A-GSA-V-S-A-A-N-S-AL-GWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_EU915912 [II-CFB-AAA027E17] clone_MDH1406_EU915912 gi|229358706|gb|EU915912| Uncultured bacterium clone MDH1406 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone MDH1406 putative proteorhodopsin gene, partial cds. EU915912 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGCGTTCTTCTTTCTCGAGTTGAACAACACCAGTAAAGAGTGGCGTACCTCGGTACTTGTATCAGGTTTGATCACTTTTATTGCAGCTGTTCACTATTACTACATGAGAGAGTATTACCAAGAGACACAGGAATCACCAACCTTTTTCCGTTATGTAGACTGGTTATTGACTGTACCTCTAATGTGCGTAGAGTTCTACCTTATCACTAAAAAATCAGGTGGTACTACCAGCTTACTTTGGAAGATGATTCTTGCTTCTGTTGTAATGCTTGTTACAGGTTATTGGGGTGAGGCCGGACTAGGCAACGCTACCATCTGGGGAACAATCAGTGCCATCGCTTACTTCTACATTGTATATGAAGTATGGATGGGAGATGTTAAGAAACTAGCTACAAGTGCTGGTTCTGCTGTATCTGCTGCCAATTCAGCTTTAGGCTGGTTTGTGTTAGTAGGTTGGGCCATCTAT MVAATAFFFLELNNTSKEWRTSVLVSGLITFIAAVHYYYMREYYQETQESPTFFRYVDWLLTVPLMCVEFYLITKKSGGTTSLLWKMILASVVMLVTGYWGEAGLGNATIWGTISAIAYFYIVYEVWMGDVKKLATSAGSAVSAANSALGWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCGTTCTTCTTTCTCGAGTTGAACAACACCAGTAAAGAGTGGCGTACCTCGGTACTTGTATCAGGTTTGATCACTTTTATTGCAGCTGTTCACTATTACTACATGAGAGAGTATTACCAA---------------------------------------------------GAGACACAGGAATCACCAACCTTTTTCCGTTATGTAGACTGG------------------------TTATTGACTGTACCTCTAATGTGCGTAGAGTTCTACCTTATCACTAAAAAA---------TCA------GGTGGTACTACC---AGCTTA------------------------------------CTTTGGAAG---ATGATTCTTGCTTCTGTTGTAATGCTTGTTACAGGTTATTGGGGTGAG---------GCC------------------GGA------CTAGGC---------------------------------------------------------------------------------------------------AACGCT------------------ACCATCTGG---GGAACAATCAGTGCCATCGCTTACTTCTACATTGTATATGAAGTA---------------TGG------ATG---GGAGATGTTAAGAAACTAGCTACAAGT------GCT---GGTTCTGCT---GTA---TCT---GCT---GCC---AAT---TCA---GCTTTA---GGCTGGTTTGTGTTAGTA---------------------------------------------------------------GGTTGG---------GCCATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFLELNNTSKEWRTSVLVSGLITFIAAVHYYYMREYYQ-----------------ETQESPTFFRYVDW--------LLTVPLMCVEFYLITKK---S--GGTT-SL------------LWK-MILASVVMLVTGYWGE---A------G--LG---------------------------------NA------TIW-GTISAIAYFYIVYEV-----W--M-GDVKKLATS--A-GSA-V-S-A-A-N-S-AL-GWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_JX169793 [II-CFB-AAA027E17] clone_pop4_JX169793 gi|430768649|gb|JX169793| Uncultured prokaryote clone pop4 rhodopsin gene, partial cds. Uncultured prokaryote clone pop4 rhodopsin gene, partial cds. JX169793 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:198431 genomic DNA other 18-janv-13 26-nov-08 freshwater from Ganges River other freshwater 25.278395 83.01621 Characterization of the chimeric seven-transmembrane protein containing conserved region of helix C-F of microbial rhodopsin from Ganges River Choi,A.R., Kim,S.J., Jung,B.H. and Jung,K.H. Appl. Microbiol. Biotechnol. 97 (2), 819-828 (2013) 23151811 #na CTCCGTTATGTTGATTGGTTATTGACAGTTCCTCTAATGTGCGTTGAGTTCTATCTGATCACCAAAAAATCCGGTGGTACAACAGGTTTGCTTTGCAAAATGATCCTGGCTTCTGTAGTAATGCTTGTAACTGGATATTGGGGTGAGGCCGGACTCGGTAACGCCACTATATGGGGTACAATCAGTGCCATCGCTTACTTCTACATCGTGTACGAAGTATGGATGGGAGATGTTAAGAAACTTGCCACAAGCGCAGGCTCTGCTGTAGCTGATGCAAACTCCGCACTCGGATGGTTTGTATTAGTAGGTTGGGCCATTTACCCG LRYVDWLLTVPLMCVEFYLITKKSGGTTGLLCKMILASVVMLVTGYWGEAGLGNATIWGTISAIAYFYIVYEVWMGDVKKLATSAGSAVADANSALGWFVLVGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCGTTATGTTGATTGG------------------------TTATTGACAGTTCCTCTAATGTGCGTTGAGTTCTATCTGATCACCAAAAAA---------TCC------GGTGGTACAACA---GGTTTG------------------------------------CTTTGCAAA---ATGATCCTGGCTTCTGTAGTAATGCTTGTAACTGGATATTGGGGTGAG---------GCC------------------GGA------CTCGGT---------------------------------------------------------------------------------------------------AACGCC------------------ACTATATGG---GGTACAATCAGTGCCATCGCTTACTTCTACATCGTGTACGAAGTA---------------TGG------ATG---GGAGATGTTAAGAAACTTGCCACAAGC------GCA---GGCTCTGCT---GTA---GCT---GAT---GCA---AAC---TCC---GCACTC---GGATGGTTTGTATTAGTA---------------------------------------------------------------GGTTGG---------GCCATTTACCCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRYVDW--------LLTVPLMCVEFYLITKK---S--GGTT-GL------------LCK-MILASVVMLVTGYWGE---A------G--LG---------------------------------NA------TIW-GTISAIAYFYIVYEV-----W--M-GDVKKLATS--A-GSA-V-A-D-A-N-S-AL-GWFVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_DQ903141 [II-CFB-AAA027E17] clone_A1S0110_DQ903141 gi|116294011|gb|DQ903141| Uncultured bacterium clone A1S0110 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A1S0110 putative proteorhodopsin gene, partial cds. DQ903141 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na South China Sea surface water (SCS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na ATGCTTGCCGCTACTGTGTTCTTCTTCCTTGAACTCAGCAACACCAGCAAAGAATGGCGTACGTCTGTCCTGGTTTCAGGATTGATCACGTTCATTGCAGCCGTGCACTACTACTACATGCGCGGTTACTATGCTGAGACACAGGATTCTCCAACCTTTTTCCGTTATGTTGACTGGTTGTTGACTGTGCCTTTGATGTGCGTTGAGTTTTATTTGATCACCAAAAAATCTGGTGGAACCACCGGTCTGCTTTGGAAAATGATCCTTGCTTCTGCTGTAATGCTGGTTACAGGTTACATGGGTGAAGCTGGATTGGGCAATGCAACCATTTGGGGTACTGTCAGTGCGATTGCTTACTTCCACATCGTATACGAAGTATGGATGGGAGATGTCAAGAGACTCGCTACCAGTGCTGGTCCGGCTGTAGCAGCTGCCAACTCTGCACTTGCTTGGTTTGTACTGGTTGGGTGGGCAATCTACCCA MLAATVFFFLELSNTSKEWRTSVLVSGLITFIAAVHYYYMRGYYAETQDSPTFFRYVDWLLTVPLMCVEFYLITKKSGGTTGLLWKMILASAVMLVTGYMGEAGLGNATIWGTVSAIAYFHIVYEVWMGDVKRLATSAGPAVAAANSALAWFVLVGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACTGTGTTCTTCTTCCTTGAACTCAGCAACACCAGCAAAGAATGGCGTACGTCTGTCCTGGTTTCAGGATTGATCACGTTCATTGCAGCCGTGCACTACTACTACATGCGCGGTTACTATGCT---------------------------------------------------GAGACACAGGATTCTCCAACCTTTTTCCGTTATGTTGACTGG------------------------TTGTTGACTGTGCCTTTGATGTGCGTTGAGTTTTATTTGATCACCAAAAAA---------TCT------GGTGGAACCACC---GGTCTG------------------------------------CTTTGGAAA---ATGATCCTTGCTTCTGCTGTAATGCTGGTTACAGGTTACATGGGTGAA---------GCT------------------GGA------TTGGGC---------------------------------------------------------------------------------------------------AATGCA------------------ACCATTTGG---GGTACTGTCAGTGCGATTGCTTACTTCCACATCGTATACGAAGTA---------------TGG------ATG---GGAGATGTCAAGAGACTCGCTACCAGT------GCT---GGTCCGGCT---GTA---GCA---GCT---GCC---AAC---TCT---GCACTT---GCTTGGTTTGTACTGGTT---------------------------------------------------------------GGGTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFLELSNTSKEWRTSVLVSGLITFIAAVHYYYMRGYYA-----------------ETQDSPTFFRYVDW--------LLTVPLMCVEFYLITKK---S--GGTT-GL------------LWK-MILASAVMLVTGYMGE---A------G--LG---------------------------------NA------TIW-GTVSAIAYFHIVYEV-----W--M-GDVKRLATS--A-GPA-V-A-A-A-N-S-AL-AWFVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_EF088635 [II-CFB-AAA027E17] PF13011_env_samples_EF088635 gi|126843520|gb|EF088635| Uncultured bacterium clone PF13011 putative proteorhodopsin gene, partial cds Uncultured bacterium clone PF13011 putative proteorhodopsin gene, partial cds EF088635 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na surface_water_sample Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGCTCGCCGCTACTGTATTCTTCTTAGTACAACATGGTCAAGTTGACAAGAAATTTAAAGATTCAATGCTTGTTGCAGCTTTAATTACTGGTATTGCAGCTGTACATTATTATTATATGAGAGACCAGTGGGCTGAAGGTCTTGGTTCACCAACTGAATTAAGATATGTTGACTGGATCTTAACTGTACCATTAATGGTAGTTGAGTTTGCTCTACTTACAGGTGTAGGTATGAGAAAACTTTTCTGGGCATCAGTTATTATGCTTGTAACCGGATATTTCGGTGAATCAGGTGTTACTGGAATGTTAGATGCTCAAACTTGGGGTGCTATCTCAGGTGCTGCTTATTTCTACATGGCTTACGAAGTAGGATGTTTCACTGTATTTACAGGGAGCGGTCCACAAGGTGATGTAGGTACTGCTTTAGCTAATGCTAAAGGTAAAATACCTGCTGCTGGTAGAATGTTACAGTGGTTTGTCTTAGTTGGATGGGCCATATACCCA MLAATVFFLVQHGQVDKKFKDSMLVAALITGIAAVHYYYMRDQWAEGLGSPTELRYVDWILTVPLMVVEFALLTGVGMRKLFWASVIMLVTGYFGESGVTGMLDAQTWGAISGAAYFYMAYEVGCFTVFTGSGPQGDVGTALANAKGKIPAAGRMLQWFVLVGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTCGCCGCTACTGTATTCTTCTTAGTACAACATGGTCAAGTTGACAAGAAATTTAAAGATTCAATGCTTGTTGCAGCTTTAATTACTGGTATTGCAGCTGTACATTATTATTATATGAGAGACCAGTGGGCT---------------------------------------------------GAAGGTCTTGGTTCACCAACTGAATTAAGATATGTTGACTGG------------------------ATCTTAACTGTACCATTAATGGTAGTTGAGTTTGCTCTACTTACAGGTGTA---------GGT---------------------------------------------------------------ATGAGAAAA---CTTTTCTGGGCATCAGTTATTATGCTTGTAACCGGATATTTCGGTGAA---------TCA------------------GGT------GTTACT------------------------GGAATGTTA------------------------------------------------------------------GATGCT------------------CAAACTTGG---GGTGCTATCTCAGGTGCTGCTTATTTCTACATGGCTTACGAAGTAGGATGTTTCACTGTATTTACAGGGAGC---GGTCCACAAGGTGATGTAGGTACTGCTTTAGCTAAT---GCTAAAGGTAAAATA---CCT---GCT---GCT---GGT---AGA---ATGTTA---CAGTGGTTTGTCTTAGTT---------------------------------------------------------------GGATGG---------GCCATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFLVQHGQVDKKFKDSMLVAALITGIAAVHYYYMRDQWA-----------------EGLGSPTELRYVDW--------ILTVPLMVVEFALLTGV---G---------------------MRK-LFWASVIMLVTGYFGE---S------G--VT--------GML----------------------DA------QTW-GAISGAAYFYMAYEVGCFTVFTGS-GPQGDVGTALAN-AKGKI-P-A-A-G-R-ML-QWFVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_EU915790 [II-CFB-AAA027E17] PF97505_env_samples_EU915790 gi|229358462|gb|EU915790| Uncultured microorganism clone PF97505 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF97505 putative proteorhodopsin gene, partial cds EU915790 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTCGCCGCTACTGTTTTCTTCTTAGTACAACATGGTCAAGTTGACAAGAAATTCAAAGATTCAATGCTTGTTGCAGCTTTAATTACTGGTATTGCAGCTGTACATTATTATTATATGAGAGATCAGTGGGCAGAAGGTCTTGGTTCACCAACTGAACTAAGATATGTTGACTGGATCTTAACTGTACCATTGATGGTAGTTGAGTTTGCTTTACTTACAGGTGTAGGTATGAGAAAACTTTTCTGGGCATCAGTAATTATGCTTGTAACCGGATATTTCGGTGAGTCAGGTGTTACTGGAATGCTAGATGCTCAAACTTGGGGTGCTATCTCAGGTGCTGCTTATTTCTACATGGCTTACGAAGTAGGGTGTTTCACTGTATTTACAGGAAGTGGTCCTCAAGGTGATGTAGGTACTGCTTTAGCTAATGCTCAAGGTAAAATACCTGCTGCTGGTAGAATGCTACAGTGGTTTGTCTTAGTTGGATGGGCAATTTAC MLAATVFFLVQHGQVDKKFKDSMLVAALITGIAAVHYYYMRDQWAEGLGSPTELRYVDWILTVPLMVVEFALLTGVGMRKLFWASVIMLVTGYFGESGVTGMLDAQTWGAISGAAYFYMAYEVGCFTVFTGSGPQGDVGTALANAQGKIPAAGRMLQWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTCGCCGCTACTGTTTTCTTCTTAGTACAACATGGTCAAGTTGACAAGAAATTCAAAGATTCAATGCTTGTTGCAGCTTTAATTACTGGTATTGCAGCTGTACATTATTATTATATGAGAGATCAGTGGGCA---------------------------------------------------GAAGGTCTTGGTTCACCAACTGAACTAAGATATGTTGACTGG------------------------ATCTTAACTGTACCATTGATGGTAGTTGAGTTTGCTTTACTTACAGGTGTA---------GGT---------------------------------------------------------------ATGAGAAAA---CTTTTCTGGGCATCAGTAATTATGCTTGTAACCGGATATTTCGGTGAG---------TCA------------------GGT------GTTACT------------------------GGAATGCTA------------------------------------------------------------------GATGCT------------------CAAACTTGG---GGTGCTATCTCAGGTGCTGCTTATTTCTACATGGCTTACGAAGTAGGGTGTTTCACTGTATTTACAGGAAGT---GGTCCTCAAGGTGATGTAGGTACTGCTTTAGCTAAT---GCTCAAGGTAAAATA---CCT---GCT---GCT---GGT---AGA---ATGCTA---CAGTGGTTTGTCTTAGTT---------------------------------------------------------------GGATGG---------GCAATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFLVQHGQVDKKFKDSMLVAALITGIAAVHYYYMRDQWA-----------------EGLGSPTELRYVDW--------ILTVPLMVVEFALLTGV---G---------------------MRK-LFWASVIMLVTGYFGE---S------G--VT--------GML----------------------DA------QTW-GAISGAAYFYMAYEVGCFTVFTGS-GPQGDVGTALAN-AQGKI-P-A-A-G-R-ML-QWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_EF088624 [II-CFB-AAA027E17] PF13026_env_samples_EF088624 gi|126843498|gb|EF088624| Uncultured bacterium clone PF13026 putative proteorhodopsin gene, partial cds Uncultured bacterium clone PF13026 putative proteorhodopsin gene, partial cds EF088624 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na surface_water_sample Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTAGCCGCTACTGCATTCTTCTTAGTACAACATGGTCAAGTTGACAAGAAATTTAAAGATTCAATGCTTGTTGCAGCTTTAATTACTGGTATTGCAGCTGTACATTATTATTACATGAGAGACCAGTGGGCTGAAGGTCTTGGTTCACCAACTGAATTAAGATATGTTGACTGGATCTTAACTGTACCATTAATGGTAGTTGAGTTTGCTTTACTTACAGGAGTAGGTATGAGAAAACTTTTCTGGGCTTCTGTTATAATGCTTGTTACTGGATATTTCGGTGAATCAGGTGTTACTGGAGTTTTAGATGCTCAAACTTGGGGTTTTATCTCAGGTGCTGCTTATTTCTATATGGCTTATGAAGTAGGTTGTTTCACTGTATTTACAGGAAGCGGTCCACAAGGTGATGTAGGTACTGCTCTAGCTAATGCTAAAGGTAAAATACCTGCTGCTGGTAGAATGTTACAGTGGTTTGTCTTAGTTGGGTGGGCAATATATCCA MVAATAFFLVQHGQVDKKFKDSMLVAALITGIAAVHYYYMRDQWAEGLGSPTELRYVDWILTVPLMVVEFALLTGVGMRKLFWASVIMLVTGYFGESGVTGVLDAQTWGFISGAAYFYMAYEVGCFTVFTGSGPQGDVGTALANAKGKIPAAGRMLQWFVLVGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGCATTCTTCTTAGTACAACATGGTCAAGTTGACAAGAAATTTAAAGATTCAATGCTTGTTGCAGCTTTAATTACTGGTATTGCAGCTGTACATTATTATTACATGAGAGACCAGTGGGCT---------------------------------------------------GAAGGTCTTGGTTCACCAACTGAATTAAGATATGTTGACTGG------------------------ATCTTAACTGTACCATTAATGGTAGTTGAGTTTGCTTTACTTACAGGAGTA---------GGT---------------------------------------------------------------ATGAGAAAA---CTTTTCTGGGCTTCTGTTATAATGCTTGTTACTGGATATTTCGGTGAA---------TCA------------------GGT------GTTACT------------------------GGAGTTTTA------------------------------------------------------------------GATGCT------------------CAAACTTGG---GGTTTTATCTCAGGTGCTGCTTATTTCTATATGGCTTATGAAGTAGGTTGTTTCACTGTATTTACAGGAAGC---GGTCCACAAGGTGATGTAGGTACTGCTCTAGCTAAT---GCTAAAGGTAAAATA---CCT---GCT---GCT---GGT---AGA---ATGTTA---CAGTGGTTTGTCTTAGTT---------------------------------------------------------------GGGTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFLVQHGQVDKKFKDSMLVAALITGIAAVHYYYMRDQWA-----------------EGLGSPTELRYVDW--------ILTVPLMVVEFALLTGV---G---------------------MRK-LFWASVIMLVTGYFGE---S------G--VT--------GVL----------------------DA------QTW-GFISGAAYFYMAYEVGCFTVFTGS-GPQGDVGTALAN-AKGKI-P-A-A-G-R-ML-QWFVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ926158 [II-CFB-AAA027E17] BOUM_OTU071_env_samples gb|KJ926158| Uncultured bacterium clone BOUM OTU071 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU071 putative proteorhodopsin gene, partial cds KJ926158 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 39.0995 5.3403333 #na #na #na #na #na ATAGATTGGATTCTAACTGTTCCACTAATGGTAGTAGAGTTTTCTCTATTAACTGGTGTGGGAATGGCCAAACTTTTTTGGCTTTCAGTGGGTATGCTAGTTGCTGGATACTTCGGTGAATCTGGAGTAACTGGAATGTTAGATGCACAAACTTGGGGAGCTATTTCTGGTGCTTGTTATTTCTGGATGGCATACGAAGTAGGTGCTCTTAGAGCTTTAAGTGATGGCATGCCATCAGGAGCTGTAGGTGAGGCATTAGCTAGCGCAAAAGGTAAAATTCCTGCTGCTGGTAAAATGTTACAATGGTTTGTACTAGTTGGGTGGGCCATTTAT IDWILTVPLMVVEFSLLTGVGMAKLFWLSVGMLVAGYFGESGVTGMLDAQTWGAISGACYFWMAYEVGALRALSDGMPSGAVGEALASAKGKIPAAGKMLQWFVLVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAGATTGG------------------------ATTCTAACTGTTCCACTAATGGTAGTAGAGTTTTCTCTATTAACTGGTGTG---------GGA---------------------------------------------------------------ATGGCCAAA---CTTTTTTGGCTTTCAGTGGGTATGCTAGTTGCTGGATACTTCGGTGAA---------TCT------------------GGA------GTAACT------------------------GGAATGTTA------------------------------------------------------------------GATGCA------------------CAAACTTGG---GGAGCTATTTCTGGTGCTTGTTATTTCTGGATGGCATACGAAGTAGGTGCTCTTAGAGCTTTAAGTGATGGC---ATGCCATCAGGAGCTGTAGGTGAGGCATTAGCTAGC---GCAAAAGGTAAAATT---CCT---GCT---GCT---GGT---AAA---ATGTTA---CAATGGTTTGTACTAGTT---------------------------------------------------------------GGGTGG---------GCCATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDW--------ILTVPLMVVEFSLLTGV---G---------------------MAK-LFWLSVGMLVAGYFGE---S------G--VT--------GML----------------------DA------QTW-GAISGACYFWMAYEVGALRALSDG-MPSGAVGEALAS-AKGKI-P-A-A-G-K-ML-QWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_JX863213 [II-CFB-AAA027E17] MALINA_OTU66_435_M_env_samples_JX863213 gi|425477376|gb|JX863213| Uncultured bacterium clone MALINA OTU66 435 M putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU66 435 M putative proteorhodopsin gene, partial cds JX863213 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 13Aug2009 0m_depth Arctic Ocean marine 69.25 -137.2 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGACTTTAACTGTTCCATTGATGTGTGTTGAGTTTTATCTTATCACTAAGAAAGCAGGCGGTACAAAATCAATCCTTTGGAAACTTATCGGAGCTTCTGTAATAATGCTTGTTACTGGTTACATCGGTGAAGCATTCTATGCAACTGAAGCTATGTCAGCATTCTGGGGTGCACTTTCTGGTGCTGCTTACTTCTACATTGTATGGATGGTATGGCGCGGAGATGTTGCCAAGCTTGCAAACAGCGCAGGTGGACAGGTTGCTAAAGCAAATAAGGCTTTAGGTAAATTTGCTATTATT WTLTVPLMCVEFYLITKKAGGTKSILWKLIGASVIMLVTGYIGEAFYATEAMSAFWGALSGAAYFYIVWMVWRGDVAKLANSAGGQVAKANKALGKFAII ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------ACTTTAACTGTTCCATTGATGTGTGTTGAGTTTTATCTTATCACTAAGAAA---------GCA------GGCGGTACAAAA---TCAATC------------------------------------CTTTGGAAA---CTTATCGGAGCTTCTGTAATAATGCTTGTTACTGGTTACATCGGTGAA---------GCA------------------TTC------TATGCA------------------------------------------------------ACT---------GAA---------------------------GCTATGTCA------------------GCATTCTGG---GGTGCACTTTCTGGTGCTGCTTACTTCTACATTGTATGGATGGTA---------------TGG------CGC---GGAGATGTTGCCAAGCTTGCAAACAGC------GCA---GGTGGACAG---GTT---GCT---AAA---GCA---AAT---AAG---GCTTTA---GGTAAATTTGCTATTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------TLTVPLMCVEFYLITKK---A--GGTK-SI------------LWK-LIGASVIMLVTGYIGE---A------F--YA------------------T---E---------AMS------AFW-GALSGAAYFYIVWMV-----W--R-GDVAKLANS--A-GGQ-V-A-K-A-N-K-AL-GKFAII-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_FJ862943 [II-CFB-AAA027E17] 41_env_samples_FJ862943 gi|226897430|gb|FJ862943| Uncultured bacterium clone 41 putative proteorhodopsin gene, partial cds Uncultured bacterium clone 41 putative proteorhodopsin gene, partial cds FJ862943 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 07-Dec-2009 #na coastal_seawater Atlantic Ocean marine 38.8489 -75.1076 Lightdependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na ATTGACTGGACGTTAACTGTGCCACTCATGTGTGTTGAGTTTTACTTAATCACTAAAAAAGCTGGTGCGAAGATGAGTCTTCTATGGAAACTTATCGCTGCGTCTGTAATCATGTTAGTTACCGGTTACCTTGGTGAGACCATTTACCGCGATACGTCCTCAGTTATGTGGGGTGTTATCTCTGGTGCTGCTTACTTCTACATTGTTTTCTTAGTATGGAAAGGAGAAGTTGCTCAGTTAGCGCAAAACGCAGGTCCTGCGGTTGCTAAAGCTGTAAAAGTTCTATTTTGGTTTGTCTTAGTAGGGTGGGCTATCTATGCTCGA IDWTLTVPLMCVEFYLITKKAGAKMSLLWKLIAASVIMLVTGYLGETIYRDTSSVMWGVISGAAYFYIVFLVWKGEVAQLAQNAGPAVAKAVKVLFWFVLVGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGACTGG------------------------ACGTTAACTGTGCCACTCATGTGTGTTGAGTTTTACTTAATCACTAAAAAA---------GCT------GGTGCGAAGATG---AGTCTT------------------------------------CTATGGAAA---CTTATCGCTGCGTCTGTAATCATGTTAGTTACCGGTTACCTTGGTGAG---------ACC------------------ATT------TACCGC------------------------------------------------------GAT---------------------------------------ACGTCCTCA------------------GTTATGTGG---GGTGTTATCTCTGGTGCTGCTTACTTCTACATTGTTTTCTTAGTA---------------TGG------AAA---GGAGAAGTTGCTCAGTTAGCGCAAAAC------GCA---GGTCCTGCG---GTT---GCT---AAA---GCT---GTA---AAA---GTTCTA---TTTTGGTTTGTCTTAGTA---------------------------------------------------------------GGGTGG---------GCTATCTATGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDW--------TLTVPLMCVEFYLITKK---A--GAKM-SL------------LWK-LIAASVIMLVTGYLGE---T------I--YR------------------D-------------TSS------VMW-GVISGAAYFYIVFLV-----W--K-GEVAQLAQN--A-GPA-V-A-K-A-V-K-VL-FWFVLV---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ926198 [II-CFB-AAA027E17] RHOMEO_AG_OTU18 gb|KJ926198| Uncultured bacterium cloneRHOMEO AG OTU18 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU18 putative proteorhodopsin gene, partial cds KJ926198 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGACGTTAACTGTGCCACTCATGTGTGTTGAGTTTTACTTAATCACTAAAAAAGCTGGTGCGAAGATGAGTCTTCTATGGAAACTTATCGCTGCGTCTGTAATCATGTTAGTTACCGGTTACCTTGGTGAGACCATTTACCGCGATACGTCCTCAGTTATGTGGGGTGTTATCTCTGGTGCTGCTTACTTCTACATTGTTTTCTTAGTATGGAAAGGAGAAGTTGCTCAGTTAGCGCAAAACGCAGGTCCTGCGGTTGCTAAAGCTGTAAAAGTTCTATTTTGGTTTGTCTTAGTA WTLTVPLMCVEFYLITKKAGAKMSLLWKLIAASVIMLVTGYLGETIYRDTSSVMWGVISGAAYFYIVFLVWKGEVAQLAQNAGPAVAKAVKVLFWFVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------ACGTTAACTGTGCCACTCATGTGTGTTGAGTTTTACTTAATCACTAAAAAA---------GCT------GGTGCGAAGATG---AGTCTT------------------------------------CTATGGAAA---CTTATCGCTGCGTCTGTAATCATGTTAGTTACCGGTTACCTTGGTGAG---------ACC------------------ATT------TACCGC------------------------------------------------------GAT---------------------------------------ACGTCCTCA------------------GTTATGTGG---GGTGTTATCTCTGGTGCTGCTTACTTCTACATTGTTTTCTTAGTA---------------TGG------AAA---GGAGAAGTTGCTCAGTTAGCGCAAAAC------GCA---GGTCCTGCG---GTT---GCT---AAA---GCT---GTA---AAA---GTTCTA---TTTTGGTTTGTCTTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------TLTVPLMCVEFYLITKK---A--GAKM-SL------------LWK-LIAASVIMLVTGYLGE---T------I--YR------------------D-------------TSS------VMW-GVISGAAYFYIVFLV-----W--K-GEVAQLAQN--A-GPA-V-A-K-A-V-K-VL-FWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_EU563284 [II-CFB-AAA027E17] BTC_1A_0mJuly_env_samples_EU563284 gi|171770578|gb|EU563284| Uncultured microorganism clone BTC 1A 0mJuly putative proteorhodopsin gene, partial cds Uncultured microorganism clone BTC 1A 0mJuly putative proteorhodopsin gene, partial cds EU563284 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 01-juil-06 Baltic_Sea_at_0m_depth Baltic Sea marine 57.32 20.05 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na CGCTATATAGATTGGTTATTGACTGTGCCTTTGATGTGTGTTGAGTTCTACTTAATCACCAAGAAAGCAGGAGCAAAAATGGGTCTATTATGGAAATTAATCTTCGCATCTGTAGTGACGTTGGTTACAGGTTACTTCGGTGAAGCTGTATACCGCGATAGCTCAGTATTGTGGGGTGTATTGTCTGGTTTAGCTTACTTCTACATCGTTTACTTAGTATGGTTCGGTGAAGTAGCTGAATTATCTAAGAATGCAGGCGAAAACGTACAACAAGCCGTTAAAGTATTGGCTTGGTTCGTATTAGTAGGCTGGGCAATTTACCCA RYIDWLLTVPLMCVEFYLITKKAGAKMGLLWKLIFASVVTLVTGYFGEAVYRDSSVLWGVLSGLAYFYIVYLVWFGEVAELSKNAGENVQQAVKVLAWFVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTATATAGATTGG------------------------TTATTGACTGTGCCTTTGATGTGTGTTGAGTTCTACTTAATCACCAAGAAA---------GCA------GGAGCAAAAATG---GGTCTA------------------------------------TTATGGAAA---TTAATCTTCGCATCTGTAGTGACGTTGGTTACAGGTTACTTCGGTGAA---------GCT------------------GTA------TACCGC------------------------------------------------------------------------------------------------GATAGCTCA------------------GTATTGTGG---GGTGTATTGTCTGGTTTAGCTTACTTCTACATCGTTTACTTAGTA---------------TGG------TTC---GGTGAAGTAGCTGAATTATCTAAGAAT------GCA---GGCGAAAAC---GTA---CAA---CAA---GCC---GTT---AAA---GTATTG---GCTTGGTTCGTATTAGTA---------------------------------------------------------------GGCTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLMCVEFYLITKK---A--GAKM-GL------------LWK-LIFASVVTLVTGYFGE---A------V--YR--------------------------------DSS------VLW-GVLSGLAYFYIVYLV-----W--F-GEVAELSKN--A-GEN-V-Q-Q-A-V-K-VL-AWFVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_GU338828 [II-CFB-AAA027E17] TNB_C_3T16_env_samples_GU338828 gi|283574528|gb|GU338828| Uncultured Antarctic sea ice bacterium clone TNB C 3T16 putative proteorhodopsin gene, partial cds Uncultured Antarctic sea ice bacterium clone TNB C 3T16 putative proteorhodopsin gene, partial cds GU338828 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) unknown [Bacteria/environmental samples] taxon:219048 genomic_DNA other 27Aug-2010 #na top_sea_ice Antarctic Ocean marine -74.633333 164.216667 Proteorhodopsinbearing bacteria in Antarctic sea ice Koh,E.Y., AtamnaIsmaeel,N., Martin,A., Cowie,R.O., Beja,O., Davy,S.K., Maas,E.W. and Ryan,K.G. Appl. Environ. Microbiol. 76 (17), 59185925 (2010) 20601510 #na GTTGAATTCTATTTGATCACCAAAAAGGCAGGTGCCAAGCAAGGATTGTTGTGGAAGTTGATTTTCGCTTCTGTAGTGATGTTGGTAACTGGTTACTTCGGAGAAGCTGTATGGCGCGAGTCTAGCGTTCTTTGGGGTGTTCTTTCTGGTGCTGCTTACTTCTACATTGCCTACTTGGTATGGTTCGGAGAAGTTGCCGCTTTGGCAAACACCGCAGGTCCTGCAGTAGCAAAAGCAACCAAGACTTTGGCTTGGTTCGTATTGGTAGGATGGGCCATATACCCAAGCTTGCGCGCA VEFYLITKKAGAKQGLLWKLIFASVVMLVTGYFGEAVWRESSVLWGVLSGAAYFYIAYLVWFGEVAALANTAGPAVAKATKTLAWFVLVGWAIYPSLRA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGAATTCTATTTGATCACCAAAAAG---------GCA------GGTGCCAAGCAA---GGATTG------------------------------------TTGTGGAAG---TTGATTTTCGCTTCTGTAGTGATGTTGGTAACTGGTTACTTCGGAGAA---------GCT------------------GTA------TGGCGC------------------------------------------------------------------------------------------------GAGTCTAGC------------------GTTCTTTGG---GGTGTTCTTTCTGGTGCTGCTTACTTCTACATTGCCTACTTGGTA---------------TGG------TTC---GGAGAAGTTGCCGCTTTGGCAAACACC------GCA---GGTCCTGCA---GTA---GCA---AAA---GCA---ACC---AAG---ACTTTG---GCTTGGTTCGTATTGGTA---------------------------------------------------------------GGATGG---------GCCATATACCCAAGCTTGCGCGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VEFYLITKK---A--GAKQ-GL------------LWK-LIFASVVMLVTGYFGE---A------V--WR--------------------------------ESS------VLW-GVLSGAAYFYIAYLV-----W--F-GEVAALANT--A-GPA-V-A-K-A-T-K-TL-AWFVLV---------------------GW---AIYPSLRA---------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_EU915918 [II-CFB-AAA027E17] clone_NMC16_EU915918 gi|229358718|gb|EU915918| Uncultured bacterium clone NMC16 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone NMC16 putative proteorhodopsin gene, partial cds. EU915918 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTATTAGCGGCTACTGTATTCTTCTTCGAAATGCGCAATGTTGCAGAGCGTTGGAGAACTTCTATGTTGGTATCAGGTTTGATTACCTTCATCGCTGCCGTGCACTACTACTACATGCGCGGATTCTTCATGGAGCACCAAACATCACCCACTTTCTTCCGTTACGTGGATTGGTTGTTGACAGTTCCTTTGATGTGTGTTGAATTCTACCTTATCACTAAAAAGGCTGGTGCCAAGCAAGGATTGTTGTGGAAGTTGATTTTCGCTTCTGTAGTAATGTTGGTAACTGGTTATTTCGGAGAAGCTGTATGGCGTGAGTCAAGCGTTCTTTGGGGTGTTCTTTCTGGTGCTGCTTATTTCTACATTGCATACTTGGTATGGTTTGGAGGAGTTGCTGCATTGGCAAACAGTGCAGGTCCAGCAGTAGCAAAAGCTACCAAGACTTTGGCTTGGTTCGTATTGGTTGGGTGGGCCATTTAC LLAATVFFFEMRNVAERWRTSMLVSGLITFIAAVHYYYMRGFFMEHQTSPTFFRYVDWLLTVPLMCVEFYLITKKAGAKQGLLWKLIFASVVMLVTGYFGEAVWRESSVLWGVLSGAAYFYIAYLVWFGGVAALANSAGPAVAKATKTLAWFVLVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTCGAAATGCGCAATGTTGCAGAGCGTTGGAGAACTTCTATGTTGGTATCAGGTTTGATTACCTTCATCGCTGCCGTGCACTACTACTACATGCGCGGATTCTTCATG---------------------------------------------------GAGCACCAAACATCACCCACTTTCTTCCGTTACGTGGATTGG------------------------TTGTTGACAGTTCCTTTGATGTGTGTTGAATTCTACCTTATCACTAAAAAG---------GCT------GGTGCCAAGCAA---GGATTG------------------------------------TTGTGGAAG---TTGATTTTCGCTTCTGTAGTAATGTTGGTAACTGGTTATTTCGGAGAA---------GCT------------------GTA------TGGCGT------------------------------------------------------------------------------------------------GAGTCAAGC------------------GTTCTTTGG---GGTGTTCTTTCTGGTGCTGCTTATTTCTACATTGCATACTTGGTA---------------TGG------TTT---GGAGGAGTTGCTGCATTGGCAAACAGT------GCA---GGTCCAGCA---GTA---GCA---AAA---GCT---ACC---AAG---ACTTTG---GCTTGGTTCGTATTGGTT---------------------------------------------------------------GGGTGG---------GCCATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFEMRNVAERWRTSMLVSGLITFIAAVHYYYMRGFFM-----------------EHQTSPTFFRYVDW--------LLTVPLMCVEFYLITKK---A--GAKQ-GL------------LWK-LIFASVVMLVTGYFGE---A------V--WR--------------------------------ESS------VLW-GVLSGAAYFYIAYLV-----W--F-GGVAALANS--A-GPA-V-A-K-A-T-K-TL-AWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_EU328199 [II-CFB-AAA027E17] clone_PS350-23_EU328199 gi|164600751|gb|EU328199| Uncultured bacterium clone PS350-23 putative proteorhodopsin pseudogene, partial sequence. Uncultured bacterium clone PS350-23 putative proteorhodopsin pseudogene, partial sequence. EU328199 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 15-janv-08 01-juin-07 Damariscotta Lake water 1 m depth Atlantic Ocean freshwater 44.105494 -69.473356 Bacteriorhodopsin presence in freshwater lakes Stepanauskas,R. and Sieracki,M.E. Unpublished #na #na TATGTGGATTGGTTGTTGACTGTTCCTTTGATGTGCGTTGAGTTTTACTTGATCACAAAGAAAGCGGGTGCTAAATCAGGATTGTCGTGGAAGTTGATTTTCGCTTCAGTTGTGATGTTGGTAACAGGTTACTTCGGAGAAGCGGTATGGCGTGAGTCAAGCGTTCTTTGGGGTGTGTTATCTGGTGCTGCTTACTTCTACATTGCATACTTGGTATGGTTCAGTGAAGTTGCTGTATTGGCAAACAACGCAGGTCCAGCAGTAGCAAAAGCTACCAAGACTTTGGCTTGGTTTGTATTGGTAGGTTGGGCTATCTACCC YVDWLLTVPLMCVEFYLITKKAGAKSGLSWKLIFASVVMLVTGYFGEAVWRESSVLWGVLSGAAYFYIAYLVWFSEVAVLANNAGPAVAKATKTLAWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTGGATTGG------------------------TTGTTGACTGTTCCTTTGATGTGCGTTGAGTTTTACTTGATCACAAAGAAA---------GCG------GGTGCTAAATCA---GGATTG------------------------------------TCGTGGAAG---TTGATTTTCGCTTCAGTTGTGATGTTGGTAACAGGTTACTTCGGAGAA---------GCG------------------GTA------TGGCGT------------------------------------------------------------------------------------------------GAGTCAAGC------------------GTTCTTTGG---GGTGTGTTATCTGGTGCTGCTTACTTCTACATTGCATACTTGGTA---------------TGG------TTC---AGTGAAGTTGCTGTATTGGCAAACAAC------GCA---GGTCCAGCA---GTA---GCA---AAA---GCT---ACC---AAG---ACTTTG---GCTTGGTTTGTATTGGTA---------------------------------------------------------------GGTTGG---------GCTATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLMCVEFYLITKK---A--GAKS-GL------------SWK-LIFASVVMLVTGYFGE---A------V--WR--------------------------------ESS------VLW-GVLSGAAYFYIAYLV-----W--F-SEVAVLANN--A-GPA-V-A-K-A-T-K-TL-AWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_EU328206 [II-CFB-AAA027E17] clone_PS350-34_EU328206 gi|164600764|gb|EU328206| Uncultured bacterium clone PS350-34 putative proteorhodopsin pseudogene, partial sequence. Uncultured bacterium clone PS350-34 putative proteorhodopsin pseudogene, partial sequence. EU328206 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 15-janv-08 01-juin-07 Damariscotta Lake water 1 m depth Atlantic Ocean freshwater 44.105494 -69.473356 Bacteriorhodopsin presence in freshwater lakes Stepanauskas,R. and Sieracki,M.E. Unpublished #na #na TATGTGGATTGGTTGTTGACTGTTCCTTTGATGTGCGTTGAGTTTTACTTGATCACAAAGAAAGCGGGTGCTAAATCAGGATTGTCGTGGAAGTTGATTTTCGCTTCAGTTGTGATGTTGGTAACAGGTTACTTCGGAGAAGCGGTATGGCGTGAGTCAAGCGTTCTTTGGGGTGTGTTATCTGGTGCTGCTTACTTCTACATTGCATACTTGGTATGGTTCAGTGAAGTTGCTGTATTGGCAAACAACGCAGGTCCAGCAGTAGCAAAAGCTACCAAGACTTTGGCTTGGTTTGTATTGGTAGGTTGGGCTATCTACCC YVDWLLTVPLMCVEFYLITKKAGAKSGLSWKLIFASVVMLVTGYFGEAVWRESSVLWGVLSGAAYFYIAYLVWFSEVAVLANNAGPAVAKATKTLAWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTGGATTGG------------------------TTGTTGACTGTTCCTTTGATGTGCGTTGAGTTTTACTTGATCACAAAGAAA---------GCG------GGTGCTAAATCA---GGATTG------------------------------------TCGTGGAAG---TTGATTTTCGCTTCAGTTGTGATGTTGGTAACAGGTTACTTCGGAGAA---------GCG------------------GTA------TGGCGT------------------------------------------------------------------------------------------------GAGTCAAGC------------------GTTCTTTGG---GGTGTGTTATCTGGTGCTGCTTACTTCTACATTGCATACTTGGTA---------------TGG------TTC---AGTGAAGTTGCTGTATTGGCAAACAAC------GCA---GGTCCAGCA---GTA---GCA---AAA---GCT---ACC---AAG---ACTTTG---GCTTGGTTTGTATTGGTA---------------------------------------------------------------GGTTGG---------GCTATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLMCVEFYLITKK---A--GAKS-GL------------SWK-LIFASVVMLVTGYFGE---A------V--WR--------------------------------ESS------VLW-GVLSGAAYFYIAYLV-----W--F-SEVAVLANN--A-GPA-V-A-K-A-T-K-TL-AWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_FJ862945 [II-CFB-AAA027E17] 45_env_samples_FJ862945 gi|226897434|gb|FJ862945| Uncultured bacterium clone 45 putative proteorhodopsin gene, partial cds Uncultured bacterium clone 45 putative proteorhodopsin gene, partial cds FJ862945 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 07-Dec-2009 #na coastal_seawater Atlantic Ocean marine 38.8489 -75.1076 Lightdependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTAGACTGGATTCTTACTGTACCTTTAATGTGTGTAGAATTCTATCTCATCACCAAAAAAGCTGGGGCCAAAATTTCTTTATTATGGAAGTTGATTTTTGCATCGTTGATAATGCTCATCACAGGTTATTTTGGTGAAACTATTGACCGTGGCAATAGTGTTATTTGGGGAGTGATTTCTGGAGCTGCCTATTTCTATATTGCGTATCTTATTTGGTTTGGCGAAGTTGCAAAATTGTCTGCTACAGCAGGTCCACAGGTTGCAAAAGCCACAAGAGTTTTGGCATGGTTTGTATTGGTGGGCTGGGCAATTTACGCTCGA VDWILTVPLMCVEFYLITKKAGAKISLLWKLIFASLIMLITGYFGETIDRGNSVIWGVISGAAYFYIAYLIWFGEVAKLSATAGPQVAKATRVLAWFVLVGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGACTGG------------------------ATTCTTACTGTACCTTTAATGTGTGTAGAATTCTATCTCATCACCAAAAAA---------GCT------GGGGCCAAAATT---TCTTTA------------------------------------TTATGGAAG---TTGATTTTTGCATCGTTGATAATGCTCATCACAGGTTATTTTGGTGAA---------ACT------------------ATT------GACCGT------------------------------------------------------------------------------------------------GGCAATAGT------------------GTTATTTGG---GGAGTGATTTCTGGAGCTGCCTATTTCTATATTGCGTATCTTATT---------------TGG------TTT---GGCGAAGTTGCAAAATTGTCTGCTACA------GCA---GGTCCACAG---GTT---GCA---AAA---GCC---ACA---AGA---GTTTTG---GCATGGTTTGTATTGGTG---------------------------------------------------------------GGCTGG---------GCAATTTACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------ILTVPLMCVEFYLITKK---A--GAKI-SL------------LWK-LIFASLIMLITGYFGE---T------I--DR--------------------------------GNS------VIW-GVISGAAYFYIAYLI-----W--F-GEVAKLSAT--A-GPQ-V-A-K-A-T-R-VL-AWFVLV---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_EU915930 [II-CFB-AAA027E17] clone_xd110_EU915930 gi|229358742|gb|EU915930| Uncultured bacterium clone xd110 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone xd110 putative proteorhodopsin gene, partial cds. EU915930 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGTTTTCTTCTTTTTTGAACTAAACAACACACCTCAAAAATGGAGAACATCCGTGCTTGTATCGGGATTGATTACCTTTATTGCAGCAGTACATTACTACTACATGCGGGGTTATAACCTCGAAACCGGGGACTCCCCTACCTTTTTTCGCTATGTAGATTGGATTCTCACAGTGCCTTTAATGTGTGTTGAATTTTATCTTATTACCAAAAAAGCCGGAGCCAAAATCTCTTTGTTATGGAAGTTGATTTTTGCATCACTCATCATGCTCGTAACAGGTTACTTTGGAGAAACAATTGACCGCGATAGTAGTGTTATGTGGGGAGTAATTTCAGGTGCAGCCTATTTTTACATTGCCTATTTAATTTGGTTTGGTGAAGTTGCGAAATTGTCGCAGACAGCAGGACCACAAGTAGCTAAAGCAACAAGAGTTTTGGCATGGTTCGTATTGGTTGGCTGGGCAATATAC MVAATVFFFFELNNTPQKWRTSVLVSGLITFIAAVHYYYMRGYNLETGDSPTFFRYVDWILTVPLMCVEFYLITKKAGAKISLLWKLIFASLIMLVTGYFGETIDRDSSVMWGVISGAAYFYIAYLIWFGEVAKLSQTAGPQVAKATRVLAWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTTTTCTTCTTTTTTGAACTAAACAACACACCTCAAAAATGGAGAACATCCGTGCTTGTATCGGGATTGATTACCTTTATTGCAGCAGTACATTACTACTACATGCGGGGTTATAACCTC---------------------------------------------------GAAACCGGGGACTCCCCTACCTTTTTTCGCTATGTAGATTGG------------------------ATTCTCACAGTGCCTTTAATGTGTGTTGAATTTTATCTTATTACCAAAAAA---------GCC------GGAGCCAAAATC---TCTTTG------------------------------------TTATGGAAG---TTGATTTTTGCATCACTCATCATGCTCGTAACAGGTTACTTTGGAGAA---------ACA------------------ATT------GACCGC------------------------------------------------------------------------------------------------GATAGTAGT------------------GTTATGTGG---GGAGTAATTTCAGGTGCAGCCTATTTTTACATTGCCTATTTAATT---------------TGG------TTT---GGTGAAGTTGCGAAATTGTCGCAGACA------GCA---GGACCACAA---GTA---GCT---AAA---GCA---ACA---AGA---GTTTTG---GCATGGTTCGTATTGGTT---------------------------------------------------------------GGCTGG---------GCAATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFFELNNTPQKWRTSVLVSGLITFIAAVHYYYMRGYNL-----------------ETGDSPTFFRYVDW--------ILTVPLMCVEFYLITKK---A--GAKI-SL------------LWK-LIFASLIMLVTGYFGE---T------I--DR--------------------------------DSS------VMW-GVISGAAYFYIAYLI-----W--F-GEVAKLSQT--A-GPQ-V-A-K-A-T-R-VL-AWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_JX169790 [II-CFB-AAA027E17] clone_pop1_JX169790 gi|430768643|gb|JX169790| Uncultured prokaryote clone pop1 rhodopsin gene, partial cds. Uncultured prokaryote clone pop1 rhodopsin gene, partial cds. JX169790 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:198431 genomic DNA other 18-janv-13 26-nov-08 freshwater from Ganges River other freshwater 25.278395 83.016207 Characterization of the chimeric seven-transmembrane protein containing conserved region of helix C-F of microbial rhodopsin from Ganges River Choi,A.R., Kim,S.J., Jung,B.H. and Jung,K.H. Appl. Microbiol. Biotechnol. 97 (2), 819-828 (2013) 23151811 #na CTCCGTTATGTTGATTGGTTATTAACGGTTCCGTTAATGTGTGTGGAGTTTTATTTAATCACCAAAAAGGCAGGAGCAAAGACTTCGTTGCTTTGGAAATTAATTCTAGCTTCGGTTGTAATGCTTGTTACAGGATTCTTTGGAGAAGCAACTGATCGTGGTAATAGCGTATTATGGGGTGTGATTTCCGGTGCTGCTTATTTCTACATTGCTTATTTAGTATGGTTTGGGGAAGTTGCAAGTTTGTCAAACACTGCTGGCCCATCTGTTGCAAAAGCAACACGAATTTTGGCTTGGTTTGTATTAGTTGGATGGGCAATCTACCCA LRYVDWLLTVPLMCVEFYLITKKAGAKTSLLWKLILASVVMLVTGFFGEATDRGNSVLWGVISGAAYFYIAYLVWFGEVASLSNTAGPSVAKATRILAWFVLVGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCGTTATGTTGATTGG------------------------TTATTAACGGTTCCGTTAATGTGTGTGGAGTTTTATTTAATCACCAAAAAG---------GCA------GGAGCAAAGACT---TCGTTG------------------------------------CTTTGGAAA---TTAATTCTAGCTTCGGTTGTAATGCTTGTTACAGGATTCTTTGGAGAA---------GCA------------------ACT------GATCGT------------------------------------------------------------------------------------------------GGTAATAGC------------------GTATTATGG---GGTGTGATTTCCGGTGCTGCTTATTTCTACATTGCTTATTTAGTA---------------TGG------TTT---GGGGAAGTTGCAAGTTTGTCAAACACT------GCT---GGCCCATCT---GTT---GCA---AAA---GCA---ACA---CGA---ATTTTG---GCTTGGTTTGTATTAGTT---------------------------------------------------------------GGATGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRYVDW--------LLTVPLMCVEFYLITKK---A--GAKT-SL------------LWK-LILASVVMLVTGFFGE---A------T--DR--------------------------------GNS------VLW-GVISGAAYFYIAYLV-----W--F-GEVASLSNT--A-GPS-V-A-K-A-T-R-IL-AWFVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_JX169794 [II-CFB-AAA027E17] clone_pop5_JX169794 gi|430768651|gb|JX169794| Uncultured prokaryote clone pop5 rhodopsin gene, partial cds. Uncultured prokaryote clone pop5 rhodopsin gene, partial cds. JX169794 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:198431 genomic DNA other 18-janv-13 26-nov-08 freshwater from Ganges River other freshwater 25.278395 83.016211 Characterization of the chimeric seven-transmembrane protein containing conserved region of helix C-F of microbial rhodopsin from Ganges River Choi,A.R., Kim,S.J., Jung,B.H. and Jung,K.H. Appl. Microbiol. Biotechnol. 97 (2), 819-828 (2013) 23151811 #na CTCCGTTATGTTGATTGGATTTTAACAGTGCCTTTAATGTGTGTTGAGTTTTATCTGATAACTAAAAAAGCGGGTGGTAAAAAAGTTTTATTATGGCAACTAATATTTGCTTCACTAGTAATGCTTGTAACCGGTTATATTGGCGAGGCTATATATGGTAAAGAAAGCCAAAGTTGGATTTGGGGTTTAATTAGTGGTTTGGCTTATTTCTATATAGTTTACCTGATTTGGTTTGGTGATGTTGCAAAGCTTGCAGGTAACGCAGGGCCAGCTGTTCAAAAAGCGGTAAAGTCACTCGGATGGTTCCTTCTAGTTGGTTGGGCGATTTACCCG LRYVDWILTVPLMCVEFYLITKKAGGKKVLLWQLIFASLVMLVTGYIGEAIYGKESQSWIWGLISGLAYFYIVYLIWFGDVAKLAGNAGPAVQKAVKSLGWFLLVGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCGTTATGTTGATTGG------------------------ATTTTAACAGTGCCTTTAATGTGTGTTGAGTTTTATCTGATAACTAAAAAA---------GCG------GGTGGTAAAAAA---GTTTTA------------------------------------TTATGGCAA---CTAATATTTGCTTCACTAGTAATGCTTGTAACCGGTTATATTGGCGAG---------GCT------------------ATA------TATGGT------------------------------------------------------AAA---------GAA---------------------------AGCCAAAGT------------------TGGATTTGG---GGTTTAATTAGTGGTTTGGCTTATTTCTATATAGTTTACCTGATT---------------TGG------TTT---GGTGATGTTGCAAAGCTTGCAGGTAAC------GCA---GGGCCAGCT---GTT---CAA---AAA---GCG---GTA---AAG---TCACTC---GGATGGTTCCTTCTAGTT---------------------------------------------------------------GGTTGG---------GCGATTTACCCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRYVDW--------ILTVPLMCVEFYLITKK---A--GGKK-VL------------LWQ-LIFASLVMLVTGYIGE---A------I--YG------------------K---E---------SQS------WIW-GLISGLAYFYIVYLI-----W--F-GDVAKLAGN--A-GPA-V-Q-K-A-V-K-SL-GWFLLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_JX169796 [II-CFB-AAA027E17] clone_pop7_JX169796 gi|430768655|gb|JX169796| Uncultured prokaryote clone pop7 rhodopsin gene, partial cds. Uncultured prokaryote clone pop7 rhodopsin gene, partial cds. JX169796 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:198431 genomic DNA other 18-janv-13 26-nov-08 freshwater from Ganges River other freshwater 25.278395 83.016213 Characterization of the chimeric seven-transmembrane protein containing conserved region of helix C-F of microbial rhodopsin from Ganges River Choi,A.R., Kim,S.J., Jung,B.H. and Jung,K.H. Appl. Microbiol. Biotechnol. 97 (2), 819-828 (2013) 23151811 #na CTCCGTTATGTTGATTGGATTTTAACAGTGCCTTTAATGTGTGTTGAGTTTTATCTGATAACTAAAAAAGCGGGTGGTAAAAAAGTTTTATTATGGCAACTAATATTTGCTTCACTAGTAATGCTTGTAACCGGTTATATTGGCGAGGCTATATATGGTAAAGAAAGCCAAAGTTGGATTTGGGGTTTAATTAGTGGTTTGGCTTATTTCTATATAGTTTACCTGATTTGGTTTGGTGATGTTGCAAAGCTTGCAGGTAACGCAGGGCCAGCTGTTCAAAAAGCGGTAAAGTCACTCGGATGGTTCCTTCTAGTTGGTTGGGCGCTTTACCCG LRYVDWILTVPLMCVEFYLITKKAGGKKVLLWQLIFASLVMLVTGYIGEAIYGKESQSWIWGLISGLAYFYIVYLIWFGDVAKLAGNAGPAVQKAVKSLGWFLLVGWALYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCGTTATGTTGATTGG------------------------ATTTTAACAGTGCCTTTAATGTGTGTTGAGTTTTATCTGATAACTAAAAAA---------GCG------GGTGGTAAAAAA---GTTTTA------------------------------------TTATGGCAA---CTAATATTTGCTTCACTAGTAATGCTTGTAACCGGTTATATTGGCGAG---------GCT------------------ATA------TATGGT------------------------------------------------------AAA---------GAA---------------------------AGCCAAAGT------------------TGGATTTGG---GGTTTAATTAGTGGTTTGGCTTATTTCTATATAGTTTACCTGATT---------------TGG------TTT---GGTGATGTTGCAAAGCTTGCAGGTAAC------GCA---GGGCCAGCT---GTT---CAA---AAA---GCG---GTA---AAG---TCACTC---GGATGGTTCCTTCTAGTT---------------------------------------------------------------GGTTGG---------GCGCTTTACCCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRYVDW--------ILTVPLMCVEFYLITKK---A--GGKK-VL------------LWQ-LIFASLVMLVTGYIGE---A------I--YG------------------K---E---------SQS------WIW-GLISGLAYFYIVYLI-----W--F-GDVAKLAGN--A-GPA-V-Q-K-A-V-K-SL-GWFLLV---------------------GW---ALYP-------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_JX169798 [II-CFB-AAA027E17] clone_pop9_JX169798 gi|430768659|gb|JX169798| Uncultured prokaryote clone pop9 rhodopsin gene, partial cds. Uncultured prokaryote clone pop9 rhodopsin gene, partial cds. JX169798 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:198431 genomic DNA other 18-janv-13 26-nov-08 freshwater from Ganges River other freshwater 25.278395 83.016215 Characterization of the chimeric seven-transmembrane protein containing conserved region of helix C-F of microbial rhodopsin from Ganges River Choi,A.R., Kim,S.J., Jung,B.H. and Jung,K.H. Appl. Microbiol. Biotechnol. 97 (2), 819-828 (2013) 23151811 #na CTCCGTTATGTTGATTGGATTTTAACAGTGCCTTTAATGTGTGTTGAGTTTTATCTGATAACTAAAAAAGCGGGTGGTAAAAAAGTTTTATTATGGCAACTAATATTTGCTTCACTAGTAATGCTTGTAACCGGTTATATTGGCGAGGCTATATATGGTAAAGAAAGCCAAAGTTGGATTTGGGGTTTAATTAGTGGTTTGGCTTATTTCTATATAGTTTACCTGATTTGGTTTGGTGATGTTGCAAAGCTTGCAGGTAACGCAGGGCCAGCTGTTCAAAAAGCGGTAAAGTCACTCGGATGGTTCCTTCTAGTTGGTTGGGCGATTTACCCG LRYVDWILTVPLMCVEFYLITKKAGGKKVLLWQLIFASLVMLVTGYIGEAIYGKESQSWIWGLISGLAYFYIVYLIWFGDVAKLAGNAGPAVQKAVKSLGWFLLVGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCGTTATGTTGATTGG------------------------ATTTTAACAGTGCCTTTAATGTGTGTTGAGTTTTATCTGATAACTAAAAAA---------GCG------GGTGGTAAAAAA---GTTTTA------------------------------------TTATGGCAA---CTAATATTTGCTTCACTAGTAATGCTTGTAACCGGTTATATTGGCGAG---------GCT------------------ATA------TATGGT------------------------------------------------------AAA---------GAA---------------------------AGCCAAAGT------------------TGGATTTGG---GGTTTAATTAGTGGTTTGGCTTATTTCTATATAGTTTACCTGATT---------------TGG------TTT---GGTGATGTTGCAAAGCTTGCAGGTAAC------GCA---GGGCCAGCT---GTT---CAA---AAA---GCG---GTA---AAG---TCACTC---GGATGGTTCCTTCTAGTT---------------------------------------------------------------GGTTGG---------GCGATTTACCCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRYVDW--------ILTVPLMCVEFYLITKK---A--GGKK-VL------------LWQ-LIFASLVMLVTGYIGE---A------I--YG------------------K---E---------SQS------WIW-GLISGLAYFYIVYLI-----W--F-GDVAKLAGN--A-GPA-V-Q-K-A-V-K-SL-GWFLLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_JX169792 [II-CFB-AAA027E17] clone_pop3_JX169792 gi|430768647|gb|JX169792| Uncultured prokaryote clone pop3 rhodopsin gene, partial cds. Uncultured prokaryote clone pop3 rhodopsin gene, partial cds. JX169792 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:198431 genomic DNA other 18-janv-13 26-nov-08 freshwater from Ganges River other freshwater 25.278395 83.016209 Characterization of the chimeric seven-transmembrane protein containing conserved region of helix C-F of microbial rhodopsin from Ganges River Choi,A.R., Kim,S.J., Jung,B.H. and Jung,K.H. Appl. Microbiol. Biotechnol. 97 (2), 819-828 (2013) 23151811 #na CTCCGTTATGTTGATTGGATTTTAACAGTGCCTTTAATGTGTGTTGAGTTTTATCTGATAACTAAAAAAGCGGGTGGTAAAAAAGTTTTATTATGGCAACTAATATTTGCTTCACTAGTAATGCTTGTAACCGGTTATATTGGCGAGGCTATATATGGTAAAGAAAGCCAAAGTTGGATTTGGGGTTTAATTAGTGGTTTGGCTTATTTCTATATAGTTTACCTGATTTGGTTTGGTGATGTTGCAAAGCTTGCAGGTAACGCAGGGCCAGCTGTTCAAAAAGCGGTAAAGTCACTCGGATGGTTTGTACTTGTTGGTTGGGCAATCTACCCG LRYVDWILTVPLMCVEFYLITKKAGGKKVLLWQLIFASLVMLVTGYIGEAIYGKESQSWIWGLISGLAYFYIVYLIWFGDVAKLAGNAGPAVQKAVKSLGWFVLVGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCGTTATGTTGATTGG------------------------ATTTTAACAGTGCCTTTAATGTGTGTTGAGTTTTATCTGATAACTAAAAAA---------GCG------GGTGGTAAAAAA---GTTTTA------------------------------------TTATGGCAA---CTAATATTTGCTTCACTAGTAATGCTTGTAACCGGTTATATTGGCGAG---------GCT------------------ATA------TATGGT------------------------------------------------------AAA---------GAA---------------------------AGCCAAAGT------------------TGGATTTGG---GGTTTAATTAGTGGTTTGGCTTATTTCTATATAGTTTACCTGATT---------------TGG------TTT---GGTGATGTTGCAAAGCTTGCAGGTAAC------GCA---GGGCCAGCT---GTT---CAA---AAA---GCG---GTA---AAG---TCACTC---GGATGGTTTGTACTTGTT---------------------------------------------------------------GGTTGG---------GCAATCTACCCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRYVDW--------ILTVPLMCVEFYLITKK---A--GGKK-VL------------LWQ-LIFASLVMLVTGYIGE---A------I--YG------------------K---E---------SQS------WIW-GLISGLAYFYIVYLI-----W--F-GDVAKLAGN--A-GPA-V-Q-K-A-V-K-SL-GWFVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_JX169791 [II-CFB-AAA027E17] clone_pop2_JX169791 gi|430768645|gb|JX169791| Uncultured prokaryote clone pop2 rhodopsin gene, partial cds. Uncultured prokaryote clone pop2 rhodopsin gene, partial cds. JX169791 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:198431 genomic DNA other 18-janv-13 26-nov-08 freshwater from Ganges River other freshwater 25.278395 83.016208 Characterization of the chimeric seven-transmembrane protein containing conserved region of helix C-F of microbial rhodopsin from Ganges River Choi,A.R., Kim,S.J., Jung,B.H. and Jung,K.H. Appl. Microbiol. Biotechnol. 97 (2), 819-828 (2013) 23151811 #na CTCCGTTATGTTGATTGGTTGCTGACTGTACCATTGATGTGTGTTGAATTTTACCTGATCACCAAAAAAGTGGGATCTACTCAAAGCTTGCTGTGGAAACTTATTGCCGCATCAGTAGGTATGCTGGTAACCGGTTATGTAGGTGAAGCTATTTATCCAACAGAATCTGTTAGCTGGGTATGGGGTGCCATCAGTGGTTTGTTCTACTTCTACATTGTTTACCTGGTATGGTTTGGTGAAGTGGCGAAACTGGCCGGTAATGCTGGTCCGGATGTAGCTGCTGCCAATAAAACACTCGCCTGGTTTGTATTGGTAGGATGGGCAATCTATCCA LRYVDWLLTVPLMCVEFYLITKKVGSTQSLLWKLIAASVGMLVTGYVGEAIYPTESVSWVWGAISGLFYFYIVYLVWFGEVAKLAGNAGPDVAAANKTLAWFVLVGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCGTTATGTTGATTGG------------------------TTGCTGACTGTACCATTGATGTGTGTTGAATTTTACCTGATCACCAAAAAA---------GTG------GGATCTACTCAA---AGCTTG------------------------------------CTGTGGAAA---CTTATTGCCGCATCAGTAGGTATGCTGGTAACCGGTTATGTAGGTGAA---------GCT------------------ATT------TATCCA------------------------------------------------------ACA---------GAA---------------------------TCTGTTAGC------------------TGGGTATGG---GGTGCCATCAGTGGTTTGTTCTACTTCTACATTGTTTACCTGGTA---------------TGG------TTT---GGTGAAGTGGCGAAACTGGCCGGTAAT------GCT---GGTCCGGAT---GTA---GCT---GCT---GCC---AAT---AAA---ACACTC---GCCTGGTTTGTATTGGTA---------------------------------------------------------------GGATGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRYVDW--------LLTVPLMCVEFYLITKK---V--GSTQ-SL------------LWK-LIAASVGMLVTGYVGE---A------I--YP------------------T---E---------SVS------WVW-GAISGLFYFYIVYLV-----W--F-GEVAKLAGN--A-GPD-V-A-A-A-N-K-TL-AWFVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_JX863212 [II-CFB-AAA027E17] MALINA_OTU65_432_M_env_samples_JX863212 gi|425477374|gb|JX863212| Uncultured bacterium clone MALINA OTU65 432 M putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU65 432 M putative proteorhodopsin gene, partial cds JX863212 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 13Aug2009 0m_depth Arctic Ocean marine 69.25 -137.2 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTATTGACTGTTCCTTTGATGTGCGTTGAGTTCTACTTGATTACTAAAAAGTCTGGTGGTACAACCTCATTGTTGTGGAAATTGATTTTTGCTTCTGTTGTAATGTTGGTTACCGGATACTTCGGTGAAACCATTTACAACGACCAGAGTGTTCTTTGGGGAGTAATCAGCGGTGCTGCATACTTCTACATAGTATATCTTGTATGGTTTGGCGAAGTTGCTAAACTTGCTACTGCTGCATCTCCAGCCGTTGCGAAAGCAAACAAAACACTTGCATGGTTTGTACTTGTA WLLTVPLMCVEFYLITKKSGGTTSLLWKLIFASVVMLVTGYFGETIYNDQSVLWGVISGAAYFYIVYLVWFGEVAKLATAASPAVAKANKTLAWFVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTATTGACTGTTCCTTTGATGTGCGTTGAGTTCTACTTGATTACTAAAAAG---------TCT------GGTGGTACAACC---TCATTG------------------------------------TTGTGGAAA---TTGATTTTTGCTTCTGTTGTAATGTTGGTTACCGGATACTTCGGTGAA---------ACC------------------ATT------TACAAC------------------------------------------------------------------------------------------------GACCAGAGT------------------GTTCTTTGG---GGAGTAATCAGCGGTGCTGCATACTTCTACATAGTATATCTTGTA---------------TGG------TTT---GGCGAAGTTGCTAAACTTGCTACTGCT------GCA---TCTCCAGCC---GTT---GCG---AAA---GCA---AAC---AAA---ACACTT---GCATGGTTTGTACTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLMCVEFYLITKK---S--GGTT-SL------------LWK-LIFASVVMLVTGYFGE---T------I--YN--------------------------------DQS------VLW-GVISGAAYFYIVYLV-----W--F-GEVAKLATA--A-SPA-V-A-K-A-N-K-TL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_JX863333 [II-CFB-AAA027E17] MALINA_OTU58_365_M_env_samples_JX863333 gi|425477616|gb|JX863333| Uncultured bacterium clone MALINA OTU58 365 M putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU58 365 M putative proteorhodopsin mRNA, partial cds JX863333 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 02Aug2009 3m_depth Arctic Ocean marine 69.61 -138.23 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGATCTTAACCGTTCCATTGATGTGTGTAGAATTTTATTTAATCACCAAAAAAGCAGGTGCTAAAATTGCTTTGCTTTGGAAATTGATCTTCGCATCATTAGTGATGCTAGTAGCAGGTTATGTAGGTGAAGTTTTGGACAGAGATGGAAGTGTACTTTGGGGTGTTATCTCTGGTATCGGTTATTTCTACATTGTTTACCTAGTTTGGTTTGGAGAAGTATCAAAACTGGCTCAAACAGCAGGTGCACAAGTTGCCAAAGCTACAAAAGTGCTTGGTTGGTTTGTTCTTGTA WILTVPLMCVEFYLITKKAGAKIALLWKLIFASLVMLVAGYVGEVLDRDGSVLWGVISGIGYFYIVYLVWFGEVSKLAQTAGAQVAKATKVLGWFVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------ATCTTAACCGTTCCATTGATGTGTGTAGAATTTTATTTAATCACCAAAAAA---------GCA------GGTGCTAAAATT---GCTTTG------------------------------------CTTTGGAAA---TTGATCTTCGCATCATTAGTGATGCTAGTAGCAGGTTATGTAGGTGAA---------GTT------------------TTG------GACAGA------------------------------------------------------------------------------------------------GATGGAAGT------------------GTACTTTGG---GGTGTTATCTCTGGTATCGGTTATTTCTACATTGTTTACCTAGTT---------------TGG------TTT---GGAGAAGTATCAAAACTGGCTCAAACA------GCA---GGTGCACAA---GTT---GCC---AAA---GCT---ACA---AAA---GTGCTT---GGTTGGTTTGTTCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------ILTVPLMCVEFYLITKK---A--GAKI-AL------------LWK-LIFASLVMLVAGYVGE---V------L--DR--------------------------------DGS------VLW-GVISGIGYFYIVYLV-----W--F-GEVSKLAQT--A-GAQ-V-A-K-A-T-K-VL-GWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_JX863204 [II-CFB-AAA027E17] MALINA_OTU58_417_M_env_samples_JX863204 gi|425477358|gb|JX863204| Uncultured bacterium clone MALINA OTU58 417 M putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU58 417 M putative proteorhodopsin gene, partial cds JX863204 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 16Aug2009 0m_depth Arctic Ocean marine 69.51 -133.42 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGATCTTAACTGTTCCATTGATGTGTGTAGAGTTTTATTTAATCACTAAAAAAGCAGGTGCTAAAATTGCGTTGCTTTGGAAATTGATCTTCGCTTCACTAGTAATGCTAGTAACAGGTTACGTTGGTGAAGTATTGGACAGAGACGGTAGTGTACTTTGGGGTGTTATCTCTGGTATTGCTTACTTCTACATCGTTTACTTAGTATGGTTTGGAGAAGTTTCTAAACTTGCTCAAACTGCAGGTGCTCAGGTTGCAAAAGCAACAAAAGTACTTGGTTGGTTTGTTCTAGTA WILTVPLMCVEFYLITKKAGAKIALLWKLIFASLVMLVTGYVGEVLDRDGSVLWGVISGIAYFYIVYLVWFGEVSKLAQTAGAQVAKATKVLGWFVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------ATCTTAACTGTTCCATTGATGTGTGTAGAGTTTTATTTAATCACTAAAAAA---------GCA------GGTGCTAAAATT---GCGTTG------------------------------------CTTTGGAAA---TTGATCTTCGCTTCACTAGTAATGCTAGTAACAGGTTACGTTGGTGAA---------GTA------------------TTG------GACAGA------------------------------------------------------------------------------------------------GACGGTAGT------------------GTACTTTGG---GGTGTTATCTCTGGTATTGCTTACTTCTACATCGTTTACTTAGTA---------------TGG------TTT---GGAGAAGTTTCTAAACTTGCTCAAACT------GCA---GGTGCTCAG---GTT---GCA---AAA---GCA---ACA---AAA---GTACTT---GGTTGGTTTGTTCTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------ILTVPLMCVEFYLITKK---A--GAKI-AL------------LWK-LIFASLVMLVTGYVGE---V------L--DR--------------------------------DGS------VLW-GVISGIAYFYIVYLV-----W--F-GEVSKLAQT--A-GAQ-V-A-K-A-T-K-VL-GWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_HQ663744 [II-CFB-AAA027E17] SCGC_AAA027E17_Bacteroidetes_HQ663744 gi|325163087|gb|HQ663744| Bacteroidetes bacterium SCGC AAA027E17 rhodopsin gene, partial cds Bacteroidetes bacterium SCGC AAA027E17 rhodopsin gene, partial cds HQ663744 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes] taxon:938695 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Mendota other freshwater 46.0095 -89.7006 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) GATTGGATTTTAACTGTTCCATTGATGTGTGTTGAATTTTATTTAATTACTAAAAAAGCAGGTGCTAAAATCGGCTTACTTTGGAAATTAATTTTCGCATCGTTAGTTATGTTGGTTACAGGTTATATTGGAGAAGTATTGGATCCTATGCAAAGCGTAATGTGGGGTGTAATCTCAGGTGCAGCTTATTTCTACATTGCTTACTTAATTTGGTTTGGCGAAGTTGCTACATTAGCACAAACTGCAGGACCTCAAGTTGCAAAAGCTACTAGAGTATTAGGTTGGTTTGTATTAGTTGGATGGGCCATTTACCCGGTCATA DWILTVPLMCVEFYLITKKAGAKIGLLWKLIFASLVMLVTGYIGEVLDPMQSVMWGVISGAAYFYIAYLIWFGEVATLAQTAGPQVAKATRVLGWFVLVGWAIYPVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTGG------------------------ATTTTAACTGTTCCATTGATGTGTGTTGAATTTTATTTAATTACTAAAAAA---------GCA------GGTGCTAAAATC---GGCTTA------------------------------------CTTTGGAAA---TTAATTTTCGCATCGTTAGTTATGTTGGTTACAGGTTATATTGGAGAA---------GTA------------------TTG------GATCCT------------------------------------------------------------------------------------------------ATGCAAAGC------------------GTAATGTGG---GGTGTAATCTCAGGTGCAGCTTATTTCTACATTGCTTACTTAATT---------------TGG------TTT---GGCGAAGTTGCTACATTAGCACAAACT------GCA---GGACCTCAA---GTT---GCA---AAA---GCT---ACT---AGA---GTATTA---GGTTGGTTTGTATTAGTT---------------------------------------------------------------GGATGG---------GCCATTTACCCGGTCATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DW--------ILTVPLMCVEFYLITKK---A--GAKI-GL------------LWK-LIFASLVMLVTGYIGE---V------L--DP--------------------------------MQS------VMW-GVISGAAYFYIAYLI-----W--F-GEVATLAQT--A-GPQ-V-A-K-A-T-R-VL-GWFVLV---------------------GW---AIYPVI------------------------------------------------------------------------------------------------ [II-CFB]_HQ663734 [II-CFB] SCGC_AAA024E18_Bacteroidetes_HQ663734 gi|325163068|gb|HQ663734| Bacteroidetes bacterium SCGC AAA024E18 rhodopsin gene, partial cds Bacteroidetes bacterium SCGC AAA024E18 rhodopsin gene, partial cds HQ663734 [[proteorhodopsin super-cluster II/CFB-like cluster]] proteorhodopsin super-cluster II CFB-like cluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes] taxon:938681 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Sparkling other freshwater 46.0095 -89.7006 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATATTGATTGGACTTTAACAGTTCCTTTGATGTGTATCGAGTATTATTTGATCTTAAAGCCAGCAGGTGCTAAAGGCGGGATGTTATCTCGTTTGATCTTTGGATCTGTGGTTATGTTAGTTGCAGGTTACATTGGAGAGGCAGTAGTTCCAGCACAAAACGTGTTATGGGGTATCATCTCTACTTTAGGATGGGCAATCATCATTTATGAAATCTACGTAGGTGAGGCGTCTAAATTAGCAGCTGCTTCTACAAGTGAGGCTGTAAAGTCTGGATACAACGTAATGCGTTGGTTCACTTTAGTAGGATGGGCCATTTACCCGGTCATA YIDWTLTVPLMCIEYYLILKPAGAKGGMLSRLIFGSVVMLVAGYIGEAVVPAQNVLWGIISTLGWAIIIYEIYVGEASKLAAASTSEAVKSGYNVMRWFTLVGWAIYPVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATTGATTGG------------------------ACTTTAACAGTTCCTTTGATGTGTATCGAGTATTATTTGATCTTAAAGCCA---------GCA------GGTGCTAAAGGC---GGGATG------------------------------------TTATCTCGT---TTGATCTTTGGATCTGTGGTTATGTTAGTTGCAGGTTACATTGGAGAG---------GCA------------------GTA------GTTCCA------------------------------------------------------------------------------------------------GCACAAAAC------------------GTGTTATGG---GGTATCATCTCTACTTTAGGATGGGCAATCATCATTTATGAAATC---------------TAC------GTA---GGTGAGGCGTCTAAATTAGCAGCTGCT------TCT---ACAAGTGAGGCTGTA---AAG---TCT---GGA---TAC---AAC---GTAATG---CGTTGGTTCACTTTAGTA---------------------------------------------------------------GGATGG---------GCCATTTACCCGGTCATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YIDW--------TLTVPLMCIEYYLILKP---A--GAKG-GM------------LSR-LIFGSVVMLVAGYIGE---A------V--VP--------------------------------AQN------VLW-GIISTLGWAIIIYEI-----Y--V-GEASKLAAA--S-TSEAV-K-S-G-Y-N-VM-RWFTLV---------------------GW---AIYPVI------------------------------------------------------------------------------------------------ [II-CFB]_HQ663751 [II-CFB] SCGC_AAA027O02_Bacteroidetes_HQ663751 gi|325163101|gb|HQ663751| Bacteroidetes bacterium SCGC AAA027O02 rhodopsin gene, partial cds Bacteroidetes bacterium SCGC AAA027O02 rhodopsin gene, partial cds HQ663751 [[proteorhodopsin super-cluster II/CFB-like cluster]] proteorhodopsin super-cluster II CFB-like cluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Bacteroidetes] taxon:938710 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Mendota other freshwater 46.0095 -89.7006 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATATTGATTGGACTTTAACAGTTCCTTTGATGTGTATCGAGTATTATTTGATCTTAAAGCCAGCAGGTGCTAAAGGCGGGATGTTATCTCGTTTAATCTTCGGATCTGTGGTGATGTTAGTTGCAGGTTACATTGGAGAGGCAGTAGTTCCAGCACAAAACGTGTTATGGGGTATCATCTCTACTTTAGGATGGGCTGTAATCATTTATGAAATCTACGTAGGTGAGGCGTCTAAATTAGCTGCTGCTTCTACTAGTGAGGCTGTAAAGTCTGGATATAACGTAATGCGTTGGTTTACATTAGTAGGATGGGCCATTTACCCGGTC YIDWTLTVPLMCIEYYLILKPAGAKGGMLSRLIFGSVVMLVAGYIGEAVVPAQNVLWGIISTLGWAVIIYEIYVGEASKLAAASTSEAVKSGYNVMRWFTLVGWAIYPV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATTGATTGG------------------------ACTTTAACAGTTCCTTTGATGTGTATCGAGTATTATTTGATCTTAAAGCCA---------GCA------GGTGCTAAAGGC---GGGATG------------------------------------TTATCTCGT---TTAATCTTCGGATCTGTGGTGATGTTAGTTGCAGGTTACATTGGAGAG---------GCA------------------GTA------GTTCCA------------------------------------------------------------------------------------------------GCACAAAAC------------------GTGTTATGG---GGTATCATCTCTACTTTAGGATGGGCTGTAATCATTTATGAAATC---------------TAC------GTA---GGTGAGGCGTCTAAATTAGCTGCTGCT------TCT---ACTAGTGAGGCTGTA---AAG---TCT---GGA---TAT---AAC---GTAATG---CGTTGGTTTACATTAGTA---------------------------------------------------------------GGATGG---------GCCATTTACCCGGTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YIDW--------TLTVPLMCIEYYLILKP---A--GAKG-GM------------LSR-LIFGSVVMLVAGYIGE---A------V--VP--------------------------------AQN------VLW-GIISTLGWAVIIYEI-----Y--V-GEASKLAAA--S-TSEAV-K-S-G-Y-N-VM-RWFTLV---------------------GW---AIYPV------------------------------------------------------------------------------------------------- [II-CFB]_EU328193 [II-CFB] clone_PS350-15_EU328193 gi|164600742|gb|EU328193| Uncultured bacterium clone PS350-15 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PS350-15 putative proteorhodopsin gene, partial cds. EU328193 [[proteorhodopsin super-cluster II/CFB-like cluster]] proteorhodopsin super-cluster II CFB-like cluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 15-janv-08 01-juin-07 Damariscotta Lake water 1 m depth Atlantic Ocean freshwater 44.105494 -69.473356 Bacteriorhodopsin presence in freshwater lakes Stepanauskas,R. and Sieracki,M.E. Unpublished #na #na TATGTGGACTGGACTTTAACTGTTCCTTTGATGTGTATTGAGTATTATTTGATTTTAAAGCCAGCTGGCGCGAAATCAGGTATGTTATCTCGCTTAATCTTTGGTTCTGTAGTTATGTTAGTTGCAGGATACATTGGAGAGACGGTAGTTCCAGCACAAAACGTAATGTGGGGAATCATCTCTACATTGGGTTGGGCATTGATCATCTATGAAATCTACATGGGTGAGGCGTCTAAATTGGCGGCAGCTTCGACAAACGAGAACGTGAAGTCGGGTTACAATGTAATGCGTTGGTTCACATTAGTGGGTTGGGCCATATATCC YVDWTLTVPLMCIEYYLILKPAGAKSGMLSRLIFGSVVMLVAGYIGETVVPAQNVMWGIISTLGWALIIYEIYMGEASKLAAASTNENVKSGYNVMRWFTLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTGGACTGG------------------------ACTTTAACTGTTCCTTTGATGTGTATTGAGTATTATTTGATTTTAAAGCCA---------GCT------GGCGCGAAATCA---GGTATG------------------------------------TTATCTCGC---TTAATCTTTGGTTCTGTAGTTATGTTAGTTGCAGGATACATTGGAGAG---------ACG------------------GTA------GTTCCA------------------------------------------------------------------------------------------------GCACAAAAC------------------GTAATGTGG---GGAATCATCTCTACATTGGGTTGGGCATTGATCATCTATGAAATC---------------TAC------ATG---GGTGAGGCGTCTAAATTGGCGGCAGCT------TCG---ACAAACGAGAACGTG---AAG---TCG---GGT---TAC---AAT---GTAATG---CGTTGGTTCACATTAGTG---------------------------------------------------------------GGTTGG---------GCCATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------TLTVPLMCIEYYLILKP---A--GAKS-GM------------LSR-LIFGSVVMLVAGYIGE---T------V--VP--------------------------------AQN------VMW-GIISTLGWALIIYEI-----Y--M-GEASKLAAA--S-TNENV-K-S-G-Y-N-VM-RWFTLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II-CFB]_EU328209 [II-CFB] clone_PS350-4_EU328209 gi|164600769|gb|EU328209| Uncultured bacterium clone PS350-4 putative proteorhodopsin pseudogene, partial sequence. Uncultured bacterium clone PS350-4 putative proteorhodopsin pseudogene, partial sequence. EU328209 [[proteorhodopsin super-cluster II/CFB-like cluster]] proteorhodopsin super-cluster II CFB-like cluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 15-janv-08 01-juin-07 Damariscotta Lake water 1 m depth Atlantic Ocean freshwater 44.105494 -69.473356 Bacteriorhodopsin presence in freshwater lakes Stepanauskas,R. and Sieracki,M.E. Unpublished #na #na TATGTGGATTGGACTTTAACTGTTCCTTTGATGTGTATTGAGTATTATTTGATTTTAAAGCCAGCTGGCGCGAAATCAGGTATGTTATCTCGCTTAATCTTTGGTTCTGTAGTTATGTTAGTTGCAGGATACATTGGAGAGGCGGTAGTTCCAGCACAAAACGTAATGTGGGGAATCATCTCTACATTGGTTTGGGCATTGATCATCTATGAAATCTACATGGGTGAGGCGTCTAAATTGGCGGCAGCTTCGACAAACGAGAACGTGAAGTCGGGTTACAATGTAATGCGTTGGTTCACATTAGTGGGTTGGGCGATTTACCC YVDWTLTVPLMCIEYYLILKPAGAKSGMLSRLIFGSVVMLVAGYIGEAVVPAQNVMWGIISTLVWALIIYEIYMGEASKLAAASTNENVKSGYNVMRWFTLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTGGATTGG------------------------ACTTTAACTGTTCCTTTGATGTGTATTGAGTATTATTTGATTTTAAAGCCA---------GCT------GGCGCGAAATCA---GGTATG------------------------------------TTATCTCGC---TTAATCTTTGGTTCTGTAGTTATGTTAGTTGCAGGATACATTGGAGAG---------GCG------------------GTA------GTTCCA------------------------------------------------------------------------------------------------GCACAAAAC------------------GTAATGTGG---GGAATCATCTCTACATTGGTTTGGGCATTGATCATCTATGAAATC---------------TAC------ATG---GGTGAGGCGTCTAAATTGGCGGCAGCT------TCG---ACAAACGAGAACGTG---AAG---TCG---GGT---TAC---AAT---GTAATG---CGTTGGTTCACATTAGTG---------------------------------------------------------------GGTTGG---------GCGATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------TLTVPLMCIEYYLILKP---A--GAKS-GM------------LSR-LIFGSVVMLVAGYIGE---A------V--VP--------------------------------AQN------VMW-GIISTLVWALIIYEI-----Y--M-GEASKLAAA--S-TNENV-K-S-G-Y-N-VM-RWFTLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [II]_DQ339253 [II] clone_S-S80M-A3_DQ339253 gi|85681481|gb|DQ339253| Uncultured bacterium clone S-S80M-A3 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-A3 predicted proteorhodopsin gene, partial cds. DQ339253 [[proteorhodopsin super-cluster II]] proteorhodopsin super-cluster II proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATTACGGTCCCACTTCAAATTATCGAGTTTTATCTTATTCTCTCAGCGGTAACTAAAGTTAAGGCCTCACTATTTTGGCAACTTCTTGTAGCCTCACTAGTAATGTTAGTTGGAGGTTACCTCGGTGAGGCAGGATACATCGATAGGATGCCAGGCTTTATAATCGGGATGTTGGGTTGGGCTGGTGTTATTTACTTAATTTTCGCTGGTGAGGCTGCCAAAGTGAATACCAGTAGCGCCAACTCAGCTGGGCAAAAAGCTTTCAACTATCTAAGATTGATTGTTTTAGTTGGTTGGGCCATTTATCCA RYIDWLITVPLQIIEFYLILSAVTKVKASLFWQLLVASLVMLVGGYLGEAGYIDRMPGFIIGMLGWAGVIYLIFAGEAAKVNTSSANSAGQKAFNYLRLIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATTACGGTCCCACTTCAAATTATCGAGTTTTATCTTATTCTCTCAGCG---------GTA---ACTAAAGTTAAGGCC---TCACTA------------------------------------TTTTGGCAA---CTTCTTGTAGCCTCACTAGTAATGTTAGTTGGAGGTTACCTCGGTGAG---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------GATAGG------------------ATGCCAGGC---TTTATAATCGGGATGTTGGGTTGGGCTGGTGTTATTTACTTAATT---------------TTC------GCT---GGTGAGGCTGCCAAAGTGAATACCAGT------AGC---GCCAACTCAGCTGGG---CAA---AAA---GCT---TTC---AAC---TATCTA---AGATTGATTGTTTTAGTT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLILSA---V-TKVKA-SL------------FWQ-LLVASLVMLVGGYLGE---A------G--Y-----------I----------------------DR------MPG-FIIGMLGWAGVIYLI-----F--A-GEAAKVNTS--S-ANSAG-Q-K-A-F-N-YL-RLIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ203819 [II-env7] SS114a40D4_env_samples_DQ203819 gi|77548086|gb|DQ203819| Uncultured bacterium clone SS114a40D4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40D4 predicted proteorhodopsin gene, partial cds DQ203819 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTACATAGACTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTTGCAGTAAGTCTTGGAGTATTTTGGAAATTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAAGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCAATATATCCA RYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLIASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATAGACTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTTGCAGTAAGTCTT---GGAGTA------------------------------------TTTTGGAAA---TTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAA---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLIASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ339244 [II-env7] clone_S-SOM-H3_DQ339244 gi|85681465|gb|DQ339244| Uncultured bacterium clone S-SOM-H3 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-H3 predicted proteorhodopsin gene, partial cds. DQ339244 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTTGCAGTAAGTCTTGGAGTATTTTGGAAATTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAAGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCAATATATCCA RYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLIASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTTGCAGTAAGTCTT---GGAGTA------------------------------------TTTTGGAAA---TTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAA---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLIASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ339305 [II-env7] clone_S-S80M-F2_DQ339305 gi|85681583|gb|DQ339305| Uncultured bacterium clone S-S80M-F2 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-F2 predicted proteorhodopsin gene, partial cds. DQ339305 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na CGATACATAGACTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTTGCAGTAAGTCTTGGAGTATTTTGGAAATTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAAGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCAATATATCCA RYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLIASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATAGACTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTTGCAGTAAGTCTT---GGAGTA------------------------------------TTTTGGAAA---TTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAA---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLIASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ339405 [II-env7] clone_S-S4OM-G8_DQ339405 gi|85681781|gb|DQ339405| Uncultured bacterium clone S-S4OM-G8 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-G8 predicted proteorhodopsin gene, partial cds. DQ339405 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na GGATACATAGACTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTTGCAGTAAGTCTTGGAGTATTTTGGAAATTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAAGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCAATCTATCCA GYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLIASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGATACATAGACTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTTGCAGTAAGTCTT---GGAGTA------------------------------------TTTTGGAAA---TTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAA---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLIASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ339211 [II-env7] clone_S-SOM-E5_DQ339211 gi|85681399|gb|DQ339211| Uncultured bacterium clone S-SOM-E5 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-E5 predicted proteorhodopsin gene, partial cds. DQ339211 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na GGATACATAGACTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTTGCAGTAAGTCTTGGAGTATTTTGGAAATTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAAGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCAATCTATCCA GYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLIASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGATACATAGACTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTTGCAGTAAGTCTT---GGAGTA------------------------------------TTTTGGAAA---TTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAA---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLIASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ339220 [II-env7] clone_S-SOM-F2_DQ339220 gi|85681417|gb|DQ339220| Uncultured bacterium clone S-SOM-F2 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-F2 predicted proteorhodopsin gene, partial cds. DQ339220 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTTGCAGTAAGTCTTGGAGTATTTTGGAAATTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAAGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCAATCTATCCA RYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLIASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTTGCAGTAAGTCTT---GGAGTA------------------------------------TTTTGGAAA---TTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAA---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLIASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ339372 [II-env7] clone_S-S4OM-D4_DQ339372 gi|85681715|gb|DQ339372| Uncultured bacterium clone S-S4OM-D4 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-D4 predicted proteorhodopsin gene, partial cds. DQ339372 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTTGCAGTAAGTCTTGGAGTATTTTGGAAATTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAAGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCCATATATCCA RYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLIASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTTGCAGTAAGTCTT---GGAGTA------------------------------------TTTTGGAAA---TTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAA---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLIASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ339403 [II-env7] clone_S-S4OM-G6_DQ339403 gi|85681777|gb|DQ339403| Uncultured bacterium clone S-S4OM-G6 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-G6 predicted proteorhodopsin gene, partial cds. DQ339403 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTTGCAGTAAGTCTTGGAGTATTTTGGAAATTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAAGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCCATATATCCA RYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLIASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTTGCAGTAAGTCTT---GGAGTA------------------------------------TTTTGGAAA---TTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAA---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLIASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ339408 [II-env7] clone_S-S4OM-H10_DQ339408 gi|85681787|gb|DQ339408| Uncultured bacterium clone S-S4OM-H10 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-H10 predicted proteorhodopsin gene, partial cds. DQ339408 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTTGCAGTAAGTCTTGGAGTATTTTGGAAATTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAAGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCCATATATCCA RYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLIASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTTGCAGTAAGTCTT---GGAGTA------------------------------------TTTTGGAAA---TTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAA---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLIASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ339352 [II-env7] clone_S-S4OM-B8_DQ339352 gi|85681675|gb|DQ339352| Uncultured bacterium clone S-S4OM-B8 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-B8 predicted proteorhodopsin gene, partial cds. DQ339352 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTTGCAGTAAGTCTTGGAGTATTTTGGAAATTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAAGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCCATATATCCA RYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLIASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTTGCAGTAAGTCTT---GGAGTA------------------------------------TTTTGGAAA---TTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAA---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLIASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ339332 [II-env7] clone_S-S80M-H8_DQ339332 gi|85681637|gb|DQ339332| Uncultured bacterium clone S-S80M-H8 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-H8 predicted proteorhodopsin gene, partial cds. DQ339332 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCATTACTGTACCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTTGCAGTAAGTCTTGGAGTATTTTGGAAATTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAAGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCCATCTATCCA RYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLIASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATTACTGTACCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTTGCAGTAAGTCTT---GGAGTA------------------------------------TTTTGGAAA---TTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAA---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLIASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ339234 [II-env7] clone_S-SOM-G4_DQ339234 gi|85681445|gb|DQ339234| Uncultured bacterium clone S-SOM-G4 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-G4 predicted proteorhodopsin gene, partial cds. DQ339234 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCATTACTGTACCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTTGCAGTAAGTCTTGGAGTATTTTGGAAATTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAAGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCCATATATCCA RYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLIASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATTACTGTACCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTTGCAGTAAGTCTT---GGAGTA------------------------------------TTTTGGAAA---TTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAA---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLIASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ339280 [II-env7] clone_S-S80M-D1_DQ339280 gi|85681535|gb|DQ339280| Uncultured bacterium clone S-S80M-D1 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-D1 predicted proteorhodopsin gene, partial cds. DQ339280 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTTGCAGTAAGTCTTGGAGTATTTTGGAAATTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAAGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCCATATATCCA RYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLIASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTTGCAGTAAGTCTT---GGAGTA------------------------------------TTTTGGAAA---TTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAA---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLIASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ339233 [II-env7] clone_S-SOM-G3_DQ339233 gi|85681443|gb|DQ339233| Uncultured bacterium clone S-SOM-G3 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-G3 predicted proteorhodopsin gene, partial cds. DQ339233 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTTGCAGTAAGTCTTGGAGTATTTTGGAAATTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAAGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCCATATATCCA RYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLIASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTTGCAGTAAGTCTT---GGAGTA------------------------------------TTTTGGAAA---TTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAA---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLIASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ339229 [II-env7] clone_S-SOM-G10_DQ339229 gi|85681435|gb|DQ339229| Uncultured bacterium clone S-SOM-G10 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-G10 predicted proteorhodopsin gene, partial cds. DQ339229 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTTGCAGTAAGTCTTGGAGTATTTTGGAAATTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAAGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCCATATATCCA RYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLIASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTTGCAGTAAGTCTT---GGAGTA------------------------------------TTTTGGAAA---TTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAA---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLIASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ203768 [II-env7] SS114a0E11_env_samples_DQ203768 gi|77547984|gb|DQ203768| Uncultured bacterium clone SS114a0E11 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0E11 predicted proteorhodopsin gene, partial cds DQ203768 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATAGACTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTTGCAGTAAGTCTTGGAGTATTTTGGAAATTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAAGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCCATTTATCCA RYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLIASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTTGCAGTAAGTCTT---GGAGTA------------------------------------TTTTGGAAA---TTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAA---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLIASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ339407 [II-env7] clone_S-S4OM-H1_DQ339407 gi|85681785|gb|DQ339407| Uncultured bacterium clone S-S4OM-H1 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-H1 predicted proteorhodopsin gene, partial cds. DQ339407 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTTGCAGTAAGTCTTGGAGTATTTTGGAAATTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAAGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCCATTTATCCA RYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLIASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTTGCAGTAAGTCTT---GGAGTA------------------------------------TTTTGGAAA---TTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAA---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLIASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ339260 [II-env7] clone_S-S80M-B1_DQ339260 gi|85681495|gb|DQ339260| Uncultured bacterium clone S-S80M-B1 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-B1 predicted proteorhodopsin gene, partial cds. DQ339260 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTTGCAGTAAGTCTTGGAGTATTTTGGAAATTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAAGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCCATTTATCCA RYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLIASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTTGCAGTAAGTCTT---GGAGTA------------------------------------TTTTGGAAA---TTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAA---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLIASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ339375 [II-env7] clone_S-S4OM-D9_DQ339375 gi|85681721|gb|DQ339375| Uncultured bacterium clone S-S4OM-D9 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-D9 predicted proteorhodopsin gene, partial cds. DQ339375 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTACCTAATTCTTGCAGCAGTTGTTGCAGTAAGTCTTGGAGTATTTTGGAAATTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAAGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCCATTTATCCA RYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLIASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTACCTAATTCTTGCAGCA---------GTT---GTTGCAGTAAGTCTT---GGAGTA------------------------------------TTTTGGAAA---TTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAA---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLIASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ339189 [II-env7] clone_S-SOM-C7_DQ339189 gi|85681355|gb|DQ339189| Uncultured bacterium clone S-SOM-C7 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-C7 predicted proteorhodopsin gene, partial cds. DQ339189 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTTGCAGTAAGTCTTGGAGTATTTTGGAAATTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAAGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCCATTTATCCA RYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLIASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTTGCAGTAAGTCTT---GGAGTA------------------------------------TTTTGGAAA---TTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAA---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLIASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ339225 [II-env7] clone_S-SOM-F7_DQ339225 gi|85681427|gb|DQ339225| Uncultured bacterium clone S-SOM-F7 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-F7 predicted proteorhodopsin gene, partial cds. DQ339225 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTTGCAGTAAGTCTTGGAGTATTTTGGAAATTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAAGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCCATTTATCCA RYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLIASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTTGCAGTAAGTCTT---GGAGTA------------------------------------TTTTGGAAA---TTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAA---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLIASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ339328 [II-env7] clone_S-S80M-H3_DQ339328 gi|85681629|gb|DQ339328| Uncultured bacterium clone S-S80M-H3 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-H3 predicted proteorhodopsin gene, partial cds. DQ339328 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTTGCAGTAAGTCTTGGAGTATTTTGGAAATTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAAGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCCATTTATCCA RYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLIASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTTGCAGTAAGTCTT---GGAGTA------------------------------------TTTTGGAAA---TTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAA---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLIASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ203305 [II-env7] SS114a80B10_env_samples_DQ203305 gi|77547058|gb|DQ203305| Uncultured bacterium clone SS114a80B10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a80B10 predicted proteorhodopsin gene, partial cds DQ203305 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_80m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_2003 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGACTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTTGCAGTAAGTCTTGGAGTATTTTGGAAATTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAAGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCCATTTACCCA SYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLIASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGACTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTTGCAGTAAGTCTT---GGAGTA------------------------------------TTTTGGAAA---TTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAA---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLIASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ203841 [II-env7] SS114a40G4_env_samples_DQ203841 gi|77548130|gb|DQ203841| Uncultured bacterium clone SS114a40G4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40G4 predicted proteorhodopsin gene, partial cds DQ203841 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTTGCAGTAAGTCTTGGAGTATTTTGGAAATTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAAGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCCATATATCCA RYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLIASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTTGCAGTAAGTCTT---GGAGTA------------------------------------TTTTGGAAA---TTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAA---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLIASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ339210 [II-env7] clone_S-SOM-E4_DQ339210 gi|85681397|gb|DQ339210| Uncultured bacterium clone S-SOM-E4 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-E4 predicted proteorhodopsin gene, partial cds. DQ339210 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTTGCAGTAAGTCTTGGAGTATTTTGGAAATTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAAGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCCATATATCCA RYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLIASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTTGCAGTAAGTCTT---GGAGTA------------------------------------TTTTGGAAA---TTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAA---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLIASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ203840 [II-env7] SS114a40G3_env_samples_DQ203840 gi|77548128|gb|DQ203840| Uncultured bacterium clone SS114a40G3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40G3 predicted proteorhodopsin gene, partial cds DQ203840 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATACATTGACTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTTGCAGTAAGTCTTGGAGTATTTTGGAAATTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAAGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCAATCTATCCA RYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLIASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATTGACTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTTGCAGTAAGTCTT---GGAGTA------------------------------------TTTTGGAAA---TTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAA---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLIASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ339213 [II-env7] clone_S-SOM-E7_DQ339213 gi|85681403|gb|DQ339213| Uncultured bacterium clone S-SOM-E7 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-E7 predicted proteorhodopsin gene, partial cds. DQ339213 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na CGATACATAGACTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTTGCAGTAAGTCTTGGAGTATTTTGGAAATTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAAGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCCATCTATCCA RYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLIASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATAGACTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTTGCAGTAAGTCTT---GGAGTA------------------------------------TTTTGGAAA---TTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAA---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLIASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ339331 [II-env7] clone_S-S80M-H6_DQ339331 gi|85681635|gb|DQ339331| Uncultured bacterium clone S-S80M-H6 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-H6 predicted proteorhodopsin gene, partial cds. DQ339331 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTCGCAGTAAGTCTTGGAGTATTTTGGAAATTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAAGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCCATCTATCCA RYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLIASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTCGCAGTAAGTCTT---GGAGTA------------------------------------TTTTGGAAA---TTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAA---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLIASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ339380 [II-env7] clone_S-S4OM-E4_DQ339380 gi|85681731|gb|DQ339380| Uncultured bacterium clone S-S4OM-E4 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-E4 predicted proteorhodopsin gene, partial cds. DQ339380 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTTGCAGTAAGTCTTGGAGTATTTTGGAAATTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAAGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCCATCTATCCA RYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLIASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTTGCAGTAAGTCTT---GGAGTA------------------------------------TTTTGGAAA---TTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAA---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLIASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ339415 [II-env7] clone_S-S4OM-H7_DQ339415 gi|85681801|gb|DQ339415| Uncultured bacterium clone S-S4OM-H7 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-H7 predicted proteorhodopsin gene, partial cds. DQ339415 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTTGCAGTAAGTCTTGGAGTATTTTGGAAATTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAAGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCCATCTATCCA RYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLIASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTTGCAGTAAGTCTT---GGAGTA------------------------------------TTTTGGAAA---TTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAA---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLIASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ339361 [II-env7] clone_S-S4OM-C5_DQ339361 gi|85681693|gb|DQ339361| Uncultured bacterium clone S-S4OM-C5 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-C5 predicted proteorhodopsin gene, partial cds. DQ339361 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTTGCAGTAAGTCTTGGAGTATTTTGGAAATTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAAGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCCATTTACCCA RYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLIASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTTGCAGTAAGTCTT---GGAGTA------------------------------------TTTTGGAAA---TTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAA---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLIASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ339222 [II-env7] clone_S-SOM-F4_DQ339222 gi|85681421|gb|DQ339222| Uncultured bacterium clone S-SOM-F4 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-F4 predicted proteorhodopsin gene, partial cds. DQ339222 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTTGCAGTAAGTCTTGGAGTATTTTGGAAATTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAAGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCCATTTACCCA RYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLIASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTTGCAGTAAGTCTT---GGAGTA------------------------------------TTTTGGAAA---TTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAA---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLIASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ339351 [II-env7] clone_S-S4OM-B7_DQ339351 gi|85681673|gb|DQ339351| Uncultured bacterium clone S-S4OM-B7 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-B7 predicted proteorhodopsin gene, partial cds. DQ339351 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na GGATACATAGACTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTTGCAGTAAGTCTTGGAGTATTTTGGAAATTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAAGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCCATTTACCCA GYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLIASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGATACATAGACTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTTGCAGTAAGTCTT---GGAGTA------------------------------------TTTTGGAAA---TTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAA---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLIASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ339273 [II-env7] clone_S-S80M-C12_DQ339273 gi|85681521|gb|DQ339273| Uncultured bacterium clone S-S80M-C12 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-C12 predicted proteorhodopsin gene, partial cds. DQ339273 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTTGCAGTAAGTCTTGGAGTATTTTGGAAATTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAAGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCCATTTACCCA RYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLIASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTTGCAGTAAGTCTT---GGAGTA------------------------------------TTTTGGAAA---TTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAA---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLIASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ339365 [II-env7] clone_S-S4OM-C9_DQ339365 gi|85681701|gb|DQ339365| Uncultured bacterium clone S-S4OM-C9 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-C9 predicted proteorhodopsin gene, partial cds. DQ339365 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTTGCAGTAAGTCTTGGAGTATTTTGGAAATTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAAGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCCATTTACCCA RYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLIASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTTGCAGTAAGTCTT---GGAGTA------------------------------------TTTTGGAAA---TTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAA---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLIASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ339281 [II-env7] clone_S-S80M-D10_DQ339281 gi|85681537|gb|DQ339281| Uncultured bacterium clone S-S80M-D10 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-D10 predicted proteorhodopsin gene, partial cds. DQ339281 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTCATTACTGTACCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTTGCAGTAAGTCTTGGAGTATTTTGGAAATTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAAGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCCATCTACCCA RYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLIASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTCATTACTGTACCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTTGCAGTAAGTCTT---GGAGTA------------------------------------TTTTGGAAA---TTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAA---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLIASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ339348 [II-env7] clone_S-S4OM-B3_DQ339348 gi|85681667|gb|DQ339348| Uncultured bacterium clone S-S4OM-B3 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-B3 predicted proteorhodopsin gene, partial cds. DQ339348 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTTGCAGTGAGTCTTGGAGTTTTTTGGAAATTATTAGTTGCGTCACTAGTTATGCTCATTGGAGGATTTCTTGGTGAGGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCCATATATCCA RYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLVASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTTGCAGTGAGTCTT---GGAGTT------------------------------------TTTTGGAAA---TTATTAGTTGCGTCACTAGTTATGCTCATTGGAGGATTTCTTGGTGAG---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLVASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ339404 [II-env7] clone_S-S4OM-G7_DQ339404 gi|85681779|gb|DQ339404| Uncultured bacterium clone S-S4OM-G7 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-G7 predicted proteorhodopsin gene, partial cds. DQ339404 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTTGCAGTGAGTCTTGGAGTTTTTTGGAAATTATTAGTTGCGTCACTAGTTATGCTCATTGGAAGATTTCTTGGTGAGGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCCATATACCCA RYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLVASLVMLIGRFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTTGCAGTGAGTCTT---GGAGTT------------------------------------TTTTGGAAA---TTATTAGTTGCGTCACTAGTTATGCTCATTGGAAGATTTCTTGGTGAG---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLVASLVMLIGRFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ339386 [II-env7] clone_S-S4OM-F1_DQ339386 gi|85681743|gb|DQ339386| Uncultured bacterium clone S-S4OM-F1 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-F1 predicted proteorhodopsin gene, partial cds. DQ339386 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTTGCAGTGAGTCTTGGAGTTTTTTGGAAATTATTAGTTGCGTCACTAGTTATGCTCATTGGAGGATTTCTTGGTGAGGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCCATATATCCA RYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLVASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTTGCAGTGAGTCTT---GGAGTT------------------------------------TTTTGGAAA---TTATTAGTTGCGTCACTAGTTATGCTCATTGGAGGATTTCTTGGTGAG---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLVASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ339268 [II-env7] clone_S-S80M-B8_DQ339268 gi|85681511|gb|DQ339268| Uncultured bacterium clone S-S80M-B8 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-B8 predicted proteorhodopsin gene, partial cds. DQ339268 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGTAGCAGTTGTTGCAGTGAGTCTTGGAGTTTTTTGGAAATTATTAGTTGCGTCACTAGTTATGCTCATTGGAGGATTTCTTGGTGAGGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCCATATATCCA RYIDWLITVPMQIVEFYLILVAVVAVSLGVFWKLLVASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGTAGCA---------GTT---GTTGCAGTGAGTCTT---GGAGTT------------------------------------TTTTGGAAA---TTATTAGTTGCGTCACTAGTTATGCTCATTGGAGGATTTCTTGGTGAG---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPMQIVEFYLILVA---V-VAVSL-GV------------FWK-LLVASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ203791 [II-env7] SS114a0H5_env_samples_DQ203791 gi|77548030|gb|DQ203791| Uncultured bacterium clone SS114a0H5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0H5 predicted proteorhodopsin gene, partial cds DQ203791 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATAGACTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTTGCAGTGAGTCTTGGAGTTTTTTGGAAATTATTAGTTGCGTCACTAGTTATGCTCATTGGAGGATTTCTTGGTGAGGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCCATCTATCCA RYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLVASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTTGCAGTGAGTCTT---GGAGTT------------------------------------TTTTGGAAA---TTATTAGTTGCGTCACTAGTTATGCTCATTGGAGGATTTCTTGGTGAG---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLVASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ339239 [II-env7] clone_S-SOM-G9_DQ339239 gi|85681455|gb|DQ339239| Uncultured bacterium clone S-SOM-G9 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-G9 predicted proteorhodopsin gene, partial cds. DQ339239 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTTGCAGTGAGTCTTGGAGTTTTTTGGAAATTATTAGTTGCGTCACTAGTTATGCTCATTGGAGGATTTCTTGGTGAGGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCCATCTATCCA RYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLVASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTTGCAGTGAGTCTT---GGAGTT------------------------------------TTTTGGAAA---TTATTAGTTGCGTCACTAGTTATGCTCATTGGAGGATTTCTTGGTGAG---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLVASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ203839 [II-env7] SS114a40G2_env_samples_DQ203839 gi|77548126|gb|DQ203839| Uncultured bacterium clone SS114a40G2 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40G2 predicted proteorhodopsin gene, partial cds DQ203839 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTTGCAGTGAGTCTTGGAGTTTTTTGGAAATTATTAGTTGCGTCACTAGTTATGCTCATTGGAGGATTTCTTGGTGAGGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCAATCTACCCA RYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLVASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTTGCAGTGAGTCTT---GGAGTT------------------------------------TTTTGGAAA---TTATTAGTTGCGTCACTAGTTATGCTCATTGGAGGATTTCTTGGTGAG---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLVASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ203302 [II-env7] SS114a80A3_env_samples_DQ203302 gi|77547052|gb|DQ203302| Uncultured bacterium clone SS114a80A3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a80A3 predicted proteorhodopsin gene, partial cds DQ203302 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_80m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_2003 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCGGTTGTTGCAGTGAGTCTTGGAGTTTTTTGGAAATTATTAGTTGCGTCACTAGTTATGCTCATTGGAGGATTTCTTGGTGAGGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCTATTTATCCA RYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLVASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCG---------GTT---GTTGCAGTGAGTCTT---GGAGTT------------------------------------TTTTGGAAA---TTATTAGTTGCGTCACTAGTTATGCTCATTGGAGGATTTCTTGGTGAG---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLVASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ203797 [II-env7] SS114a40A3_env_samples_DQ203797 gi|77548042|gb|DQ203797| Uncultured bacterium clone SS114a40A3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40A3 predicted proteorhodopsin gene, partial cds DQ203797 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGATTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTTGCAGTGAGTCTTGGAGTTTTTTGGAAATTATTAGTTGCGTCACTAGTTATGCTCATTGGAGGATTTCTTGGTGAGGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCCATTTATCCA SYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLVASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGATTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTTGCAGTGAGTCTT---GGAGTT------------------------------------TTTTGGAAA---TTATTAGTTGCGTCACTAGTTATGCTCATTGGAGGATTTCTTGGTGAG---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLVASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ203802 [II-env7] SS114a40B1_env_samples_DQ203802 gi|77548052|gb|DQ203802| Uncultured bacterium clone SS114a40B1 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40B1 predicted proteorhodopsin gene, partial cds DQ203802 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATAGACTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTTGCAGTGAGTCTTGGAGTTTTTTGGAAATTATTAGTTGCGTCACTAGTTATGCTCATTGGAGGATTTCTTGGTGAGGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCCATTTATCCA RYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLVASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTTGCAGTGAGTCTT---GGAGTT------------------------------------TTTTGGAAA---TTATTAGTTGCGTCACTAGTTATGCTCATTGGAGGATTTCTTGGTGAG---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLVASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ339366 [II-env7] clone_S-S4OM-D1_DQ339366 gi|85681703|gb|DQ339366| Uncultured bacterium clone S-S4OM-D1 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-D1 predicted proteorhodopsin gene, partial cds. DQ339366 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na CGATACATAGACTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTTGCAGTGAGTCTTGGAGTTTTTTGGAAATTATTAGTTGCGTCACTAGTTATGCTCATTGGAGGATTTCTTGGTGAGGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCCATTTATCCA RYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLVASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATAGACTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTTGCAGTGAGTCTT---GGAGTT------------------------------------TTTTGGAAA---TTATTAGTTGCGTCACTAGTTATGCTCATTGGAGGATTTCTTGGTGAG---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLVASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ339306 [II-env7] clone_S-S80M-F3_DQ339306 gi|85681585|gb|DQ339306| Uncultured bacterium clone S-S80M-F3 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-F3 predicted proteorhodopsin gene, partial cds. DQ339306 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTTGCAGTGAGTCTTGGAGTTTTTTGGAAATTATTAGTTGCGTCACTAGTTATGCTCATTGGAGGATTTCTTGGTGAGGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCCATTTATCCA RYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLVASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTTGCAGTGAGTCTT---GGAGTT------------------------------------TTTTGGAAA---TTATTAGTTGCGTCACTAGTTATGCTCATTGGAGGATTTCTTGGTGAG---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLVASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ339215 [II-env7] clone_S-SOM-E9_DQ339215 gi|85681407|gb|DQ339215| Uncultured bacterium clone S-SOM-E9 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-E9 predicted proteorhodopsin gene, partial cds. DQ339215 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTCGCAGTAAGTCTTGGAGTATTTTGGAAATTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAAGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTAGGGTGGGCCATTTATCCA RYIDWLITVPMQIVEFYLILAAVVAVSLGVFWKLLIASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTCATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTCGCAGTAAGTCTT---GGAGTA------------------------------------TTTTGGAAA---TTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAA---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLIASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ203653 [II-env7] medHO120H3_env_samples_DQ203653 gi|77547754|gb|DQ203653| Uncultured bacterium clone medHO120H3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120H3 predicted proteorhodopsin gene, partial cds DQ203653 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAGTAACTGTTCCTATGCAAATCGTTGAATTTTATCTAATTCTTGCAGCATGTACTGCTGTTAGTCTTGGAGTATTTTGGAAGCTTTTAGGCGGTTCATTAGTTATGCTTTTAGGAGGATATCTTGGTGAAACTGGAGGCCTTGGTGTATCACCATTGGTCGGCTTTATCGTCGGAATGGCTGGTTGGGTATTTATCATTTATTACATATTTGTAGGTGAAGCTGCTCAAATCAAAGATTCTGCAGGTAACGAAAACCTAGTAATGGCTTTCGACGGAATTAAATGGATTGTAACAATAGGGTGGGCCATCTATCCA RYIDWLVTVPMQIVEFYLILAACTAVSLGVFWKLLGGSLVMLLGGYLGETGGLGVSPLVGFIVGMAGWVFIIYYIFVGEAAQIKDSAGNENLVMAFDGIKWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAGTAACTGTTCCTATGCAAATCGTTGAATTTTATCTAATTCTTGCAGCA---------TGT---ACTGCTGTTAGTCTT---GGAGTA------------------------------------TTTTGGAAG---CTTTTAGGCGGTTCATTAGTTATGCTTTTAGGAGGATATCTTGGTGAA---------ACT------------------GGAGGCCTTGGT---------------------------------GTA------------------------------------------------------------------TCACCA------------------TTGGTCGGC---TTTATCGTCGGAATGGCTGGTTGGGTATTTATCATTTATTACATA---------------TTT------GTA---GGTGAAGCTGCTCAAATCAAAGATTCT------GCA---GGTAACGAAAACCTA---GTA---ATG---GCT---TTC---GAC---GGAATT---AAATGGATTGTAACAATA---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LVTVPMQIVEFYLILAA---C-TAVSL-GV------------FWK-LLGGSLVMLLGGYLGE---T------GGLG-----------V----------------------SP------LVG-FIVGMAGWVFIIYYI-----F--V-GEAAQIKDS--A-GNENL-V-M-A-F-D-GI-KWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ203669 [II-env7] medHO155A7_env_samples_DQ203669 gi|77547786|gb|DQ203669| Uncultured bacterium clone medHO155A7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155A7 predicted proteorhodopsin gene, partial cds DQ203669 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAGTAACTGTTCCTATGCAAATCGTTGAATTTTATCTAATTCTTGCAGCATGTACTGCTGTTAGTCTTGGAGTATTTTGGAAGCTTTTAGGCGGTTCATTAGTTATGCTTTTAGGAGGATATCTTGGTGAAACTGGAGGCCTTGGTGTATCACCATTGGTCGGCTTTATCGTCGGAATGGCTGGTTGGGTATTTACCATTTATTACATATTTGTAGGTGAAGCTGCTCAAATCAAAGATTCTGCAGGTAACGAAAACCTAGTAATGGCTTTCGGCGGAATTAAATGGATTGTAACAATAGGGTGGGCCATCTACCCA RYIDWLVTVPMQIVEFYLILAACTAVSLGVFWKLLGGSLVMLLGGYLGETGGLGVSPLVGFIVGMAGWVFTIYYIFVGEAAQIKDSAGNENLVMAFGGIKWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAGTAACTGTTCCTATGCAAATCGTTGAATTTTATCTAATTCTTGCAGCA---------TGT---ACTGCTGTTAGTCTT---GGAGTA------------------------------------TTTTGGAAG---CTTTTAGGCGGTTCATTAGTTATGCTTTTAGGAGGATATCTTGGTGAA---------ACT------------------GGAGGCCTTGGT---------------------------------GTA------------------------------------------------------------------TCACCA------------------TTGGTCGGC---TTTATCGTCGGAATGGCTGGTTGGGTATTTACCATTTATTACATA---------------TTT------GTA---GGTGAAGCTGCTCAAATCAAAGATTCT------GCA---GGTAACGAAAACCTA---GTA---ATG---GCT---TTC---GGC---GGAATT---AAATGGATTGTAACAATA---------------------------------------------------------------GGGTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LVTVPMQIVEFYLILAA---C-TAVSL-GV------------FWK-LLGGSLVMLLGGYLGE---T------GGLG-----------V----------------------SP------LVG-FIVGMAGWVFTIYYI-----F--V-GEAAQIKDS--A-GNENL-V-M-A-F-G-GI-KWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ203693 [II-env7] medHO155D11_env_samples_DQ203693 gi|77547834|gb|DQ203693| Uncultured bacterium clone medHO155D11 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155D11 predicted proteorhodopsin gene, partial cds DQ203693 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAGTAACTGTTCCTATGCAAATCGTTGAATTTTATCTAATTCTTGCAGCATGTACTGCTGTTAGTCTTGGAGTATTTTGGAAGCTTTTAGGCGGTTCATTAGTTATGCTTTTAGGAGGATATCTTGGTGAAACTGGAGGCCTTGGTGTATCACCATTGGTCGGCTTTATCGTCGGAATGGCTGGTTGGGTATTTATCATTTATTACATATTTGTAGGTGAAGCTGCTCAAATCAAAGATTCTGCAGGTAACGAAAACCTAGTAATGGCTTTCGACGGAATTAAATGGATTGTAACAATAGGTTGGGCCATTTATCCA RYIDWLVTVPMQIVEFYLILAACTAVSLGVFWKLLGGSLVMLLGGYLGETGGLGVSPLVGFIVGMAGWVFIIYYIFVGEAAQIKDSAGNENLVMAFDGIKWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAGTAACTGTTCCTATGCAAATCGTTGAATTTTATCTAATTCTTGCAGCA---------TGT---ACTGCTGTTAGTCTT---GGAGTA------------------------------------TTTTGGAAG---CTTTTAGGCGGTTCATTAGTTATGCTTTTAGGAGGATATCTTGGTGAA---------ACT------------------GGAGGCCTTGGT---------------------------------GTA------------------------------------------------------------------TCACCA------------------TTGGTCGGC---TTTATCGTCGGAATGGCTGGTTGGGTATTTATCATTTATTACATA---------------TTT------GTA---GGTGAAGCTGCTCAAATCAAAGATTCT------GCA---GGTAACGAAAACCTA---GTA---ATG---GCT---TTC---GAC---GGAATT---AAATGGATTGTAACAATA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LVTVPMQIVEFYLILAA---C-TAVSL-GV------------FWK-LLGGSLVMLLGGYLGE---T------GGLG-----------V----------------------SP------LVG-FIVGMAGWVFIIYYI-----F--V-GEAAQIKDS--A-GNENL-V-M-A-F-D-GI-KWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ203615 [II-env7] medHO120D2_env_samples_DQ203615 gi|77547678|gb|DQ203615| Uncultured bacterium clone medHO120D2 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120D2 predicted proteorhodopsin gene, partial cds DQ203615 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAGTAACTGTTCCTATGCAAATCGTTGAATTTTATCTAATTCTTGCAGCATGTACTGCTGTTAGTCTTGGAGTATTTTGGAAGCTTTTAGGCGGTTCATTAGTTATGCTTTTAGGAGGATATCTTGGTGAAACTGGAGGCCTTGGTGTATCACCATTGGTCGGCTTTATCGTCGGAATGGCTGGTTGGGTATTTATCATTTATTACATATTTGTAGGTGAAGCTGCTCAAATCAAAGATTCTGCAGGTAACGAAAACCTAGTAATGGCTTTCGACGGAATTAAATGGATTGTAACAATAGGTTGGGCAATCTATCCA RYIDWLVTVPMQIVEFYLILAACTAVSLGVFWKLLGGSLVMLLGGYLGETGGLGVSPLVGFIVGMAGWVFIIYYIFVGEAAQIKDSAGNENLVMAFDGIKWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAGTAACTGTTCCTATGCAAATCGTTGAATTTTATCTAATTCTTGCAGCA---------TGT---ACTGCTGTTAGTCTT---GGAGTA------------------------------------TTTTGGAAG---CTTTTAGGCGGTTCATTAGTTATGCTTTTAGGAGGATATCTTGGTGAA---------ACT------------------GGAGGCCTTGGT---------------------------------GTA------------------------------------------------------------------TCACCA------------------TTGGTCGGC---TTTATCGTCGGAATGGCTGGTTGGGTATTTATCATTTATTACATA---------------TTT------GTA---GGTGAAGCTGCTCAAATCAAAGATTCT------GCA---GGTAACGAAAACCTA---GTA---ATG---GCT---TTC---GAC---GGAATT---AAATGGATTGTAACAATA---------------------------------------------------------------GGTTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LVTVPMQIVEFYLILAA---C-TAVSL-GV------------FWK-LLGGSLVMLLGGYLGE---T------GGLG-----------V----------------------SP------LVG-FIVGMAGWVFIIYYI-----F--V-GEAAQIKDS--A-GNENL-V-M-A-F-D-GI-KWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ203711 [II-env7] medHO155F11_env_samples_DQ203711 gi|77547870|gb|DQ203711| Uncultured bacterium clone medHO155F11 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155F11 predicted proteorhodopsin gene, partial cds DQ203711 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATCGATTGGCTAGTAACTGTTCCTATGCAAATCGTTGAATTTTATCTAATTCTTGCAGCATGTACTGCTGTTAGTCTTGGAGTATTTTGGAAGCTTTTAGGCGGTTCATTAGTTATGCTTTTAGGAGGATATCTTGGTGAAACTGGAGGCCTTGGTGTATCACCATTGGTCGGCTTTATCGTCGGAATGGCTGGTTGGGTATTTATCATTTATTACATATTTGTAGGTGAAGCTGCTCAAATCAAAGATTCTGCAGGTAACGAAAACCTAGTAATGGCTTTCGACGGAATTAAATGGATTGTAACAATAGGTTGGGCAATATATCCA SYIDWLVTVPMQIVEFYLILAACTAVSLGVFWKLLGGSLVMLLGGYLGETGGLGVSPLVGFIVGMAGWVFIIYYIFVGEAAQIKDSAGNENLVMAFDGIKWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATCGATTGG------------------------CTAGTAACTGTTCCTATGCAAATCGTTGAATTTTATCTAATTCTTGCAGCA---------TGT---ACTGCTGTTAGTCTT---GGAGTA------------------------------------TTTTGGAAG---CTTTTAGGCGGTTCATTAGTTATGCTTTTAGGAGGATATCTTGGTGAA---------ACT------------------GGAGGCCTTGGT---------------------------------GTA------------------------------------------------------------------TCACCA------------------TTGGTCGGC---TTTATCGTCGGAATGGCTGGTTGGGTATTTATCATTTATTACATA---------------TTT------GTA---GGTGAAGCTGCTCAAATCAAAGATTCT------GCA---GGTAACGAAAACCTA---GTA---ATG---GCT---TTC---GAC---GGAATT---AAATGGATTGTAACAATA---------------------------------------------------------------GGTTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LVTVPMQIVEFYLILAA---C-TAVSL-GV------------FWK-LLGGSLVMLLGGYLGE---T------GGLG-----------V----------------------SP------LVG-FIVGMAGWVFIIYYI-----F--V-GEAAQIKDS--A-GNENL-V-M-A-F-D-GI-KWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ203695 [II-env7] medHO155D2_env_samples_DQ203695 gi|77547838|gb|DQ203695| Uncultured bacterium clone medHO155D2 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155D2 predicted proteorhodopsin gene, partial cds DQ203695 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATACATTGATTGGCTAGTAACTGTTCCTATGCAAATCGTTGAATTTTATCTAATTCTTGCAGCATGTACTGCTGTTAGTCTTGGAGTATTTTGGAAGCTTTTAGGCGGTTCATTAGTTATGCTTTTAGGAGGATATCTTGGTGAAACTGGAGGCCTTGGTGTATCACCATTGGTCGGCTTTATCGTCGGAATGGCTGGTTGGGTATTTATCATTTATTACATATTTGTAGGTGAAGCTGCTCAAATCAAAGATTCTGCAGGTAACGAAAACCTAGTAATGGCTTTCGACGGAATTAAATGGATTGTAACAATAGGTTGGGCAATATATCCA RYIDWLVTVPMQIVEFYLILAACTAVSLGVFWKLLGGSLVMLLGGYLGETGGLGVSPLVGFIVGMAGWVFIIYYIFVGEAAQIKDSAGNENLVMAFDGIKWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATTGATTGG------------------------CTAGTAACTGTTCCTATGCAAATCGTTGAATTTTATCTAATTCTTGCAGCA---------TGT---ACTGCTGTTAGTCTT---GGAGTA------------------------------------TTTTGGAAG---CTTTTAGGCGGTTCATTAGTTATGCTTTTAGGAGGATATCTTGGTGAA---------ACT------------------GGAGGCCTTGGT---------------------------------GTA------------------------------------------------------------------TCACCA------------------TTGGTCGGC---TTTATCGTCGGAATGGCTGGTTGGGTATTTATCATTTATTACATA---------------TTT------GTA---GGTGAAGCTGCTCAAATCAAAGATTCT------GCA---GGTAACGAAAACCTA---GTA---ATG---GCT---TTC---GAC---GGAATT---AAATGGATTGTAACAATA---------------------------------------------------------------GGTTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LVTVPMQIVEFYLILAA---C-TAVSL-GV------------FWK-LLGGSLVMLLGGYLGE---T------GGLG-----------V----------------------SP------LVG-FIVGMAGWVFIIYYI-----F--V-GEAAQIKDS--A-GNENL-V-M-A-F-D-GI-KWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ203705 [II-env7] medHO155E4_env_samples_DQ203705 gi|77547858|gb|DQ203705| Uncultured bacterium clone medHO155E4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155E4 predicted proteorhodopsin gene, partial cds DQ203705 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAGTAACTGTTCCTATGCAAATCGTTGAATTTTATCTAATTCTTGCAGCATGTACTGCTGTTAGTCTTGGAGTATTTTGGAAGCTTTTAGGCGGTTCATTAGTTATGCTTTTAGGAGGATATCTTGGTGAAACTGGAGGCCTTGGTGTATCACCATTGGTTGGCTTTATCGTCGGAATGGCTGGTTGGGTATTTATCATTTATTACATATTTGTAGGTGAAGCTGCTCAAATCAAAGATTCTGCAGGTAACGAAAACCTAGTAATGGCTTTCGACGGAATTAAATGGATTGTAACAATAGGTTGGGCAATATACCCA RYIDWLVTVPMQIVEFYLILAACTAVSLGVFWKLLGGSLVMLLGGYLGETGGLGVSPLVGFIVGMAGWVFIIYYIFVGEAAQIKDSAGNENLVMAFDGIKWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAGTAACTGTTCCTATGCAAATCGTTGAATTTTATCTAATTCTTGCAGCA---------TGT---ACTGCTGTTAGTCTT---GGAGTA------------------------------------TTTTGGAAG---CTTTTAGGCGGTTCATTAGTTATGCTTTTAGGAGGATATCTTGGTGAA---------ACT------------------GGAGGCCTTGGT---------------------------------GTA------------------------------------------------------------------TCACCA------------------TTGGTTGGC---TTTATCGTCGGAATGGCTGGTTGGGTATTTATCATTTATTACATA---------------TTT------GTA---GGTGAAGCTGCTCAAATCAAAGATTCT------GCA---GGTAACGAAAACCTA---GTA---ATG---GCT---TTC---GAC---GGAATT---AAATGGATTGTAACAATA---------------------------------------------------------------GGTTGG---------GCAATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LVTVPMQIVEFYLILAA---C-TAVSL-GV------------FWK-LLGGSLVMLLGGYLGE---T------GGLG-----------V----------------------SP------LVG-FIVGMAGWVFIIYYI-----F--V-GEAAQIKDS--A-GNENL-V-M-A-F-D-GI-KWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ203465 [II-env7] medHO10E12_env_samples_DQ203465 gi|77547378|gb|DQ203465| Uncultured bacterium clone medHO10E12 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10E12 predicted proteorhodopsin gene, partial cds DQ203465 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGATTGGCTAGTAACTGTTCCTATGCAAATCGTTGAATTTTATCTAATTCTTGCAGCATGTACTGCTGTTAGTCTTGGAGTATTTTGGAAGCTTTTGGCTGGTTCATTAGTTATGCTTTTAGGAGGATATCTTGGTGAAACAGGAGTCGTATCAGCAATGGTCGGCTTTGTTGTCGGAATGGCTGGTTGGGTATTTATCATCTATTACATATTTGTAGGTGAAGCTGCTCAAATCAAAGATTCTGCAGGCAACGAAAACCTAGTAATGGCTTTCGACGGAATTAAATGGATCGTAACAATAGGCTGGGCAATTTACCCA SYIDWLVTVPMQIVEFYLILAACTAVSLGVFWKLLAGSLVMLLGGYLGETGVVSAMVGFVVGMAGWVFIIYYIFVGEAAQIKDSAGNENLVMAFDGIKWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGATTGG------------------------CTAGTAACTGTTCCTATGCAAATCGTTGAATTTTATCTAATTCTTGCAGCA---------TGT---ACTGCTGTTAGTCTT---GGAGTA------------------------------------TTTTGGAAG---CTTTTGGCTGGTTCATTAGTTATGCTTTTAGGAGGATATCTTGGTGAA---------ACA------------------GGA------GTC---------------------------------GTA------------------------------------------------------------------TCAGCA------------------ATGGTCGGC---TTTGTTGTCGGAATGGCTGGTTGGGTATTTATCATCTATTACATA---------------TTT------GTA---GGTGAAGCTGCTCAAATCAAAGATTCT------GCA---GGCAACGAAAACCTA---GTA---ATG---GCT---TTC---GAC---GGAATT---AAATGGATCGTAACAATA---------------------------------------------------------------GGCTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LVTVPMQIVEFYLILAA---C-TAVSL-GV------------FWK-LLAGSLVMLLGGYLGE---T------G--V-----------V----------------------SA------MVG-FVVGMAGWVFIIYYI-----F--V-GEAAQIKDS--A-GNENL-V-M-A-F-D-GI-KWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ203616 [II-env7] medHO120D4_env_samples_DQ203616 gi|77547680|gb|DQ203616| Uncultured bacterium clone medHO120D4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120D4 predicted proteorhodopsin gene, partial cds DQ203616 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAGTAACTGTTCCTATGCAAATCGTTGAATTTTATCTAATTCTTGCAGCATGTACTGCTGTTAGTCTTGGAGTATTTTGGAAGCTTTTGGCTGGTTCATTAGTTATGCTTTTAGGAGGATATCTTGGTGAAACAGGAGTCGTATCAGCAATGGTCGGCTTTGTTGTCGGAATGGCTGGTTGGGTATTTATCATCTATTACATATTTGTAGGTGAAGCTGCTCAAATCAAAGATTCTGCAGGCAACGAAAACCTAGTAATGGCTTTCGACGGAATTAAATGGATCGTAACAATAGGGTGGGCAATTTACCCA RYIDWLVTVPMQIVEFYLILAACTAVSLGVFWKLLAGSLVMLLGGYLGETGVVSAMVGFVVGMAGWVFIIYYIFVGEAAQIKDSAGNENLVMAFDGIKWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAGTAACTGTTCCTATGCAAATCGTTGAATTTTATCTAATTCTTGCAGCA---------TGT---ACTGCTGTTAGTCTT---GGAGTA------------------------------------TTTTGGAAG---CTTTTGGCTGGTTCATTAGTTATGCTTTTAGGAGGATATCTTGGTGAA---------ACA------------------GGA------GTC---------------------------------GTA------------------------------------------------------------------TCAGCA------------------ATGGTCGGC---TTTGTTGTCGGAATGGCTGGTTGGGTATTTATCATCTATTACATA---------------TTT------GTA---GGTGAAGCTGCTCAAATCAAAGATTCT------GCA---GGCAACGAAAACCTA---GTA---ATG---GCT---TTC---GAC---GGAATT---AAATGGATCGTAACAATA---------------------------------------------------------------GGGTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LVTVPMQIVEFYLILAA---C-TAVSL-GV------------FWK-LLAGSLVMLLGGYLGE---T------G--V-----------V----------------------SA------MVG-FVVGMAGWVFIIYYI-----F--V-GEAAQIKDS--A-GNENL-V-M-A-F-D-GI-KWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ203659 [II-env7] medHO1551_env_samples_DQ203659 gi|77547766|gb|DQ203659| Uncultured bacterium clone medHO1551 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO1551 predicted proteorhodopsin gene, partial cds DQ203659 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGACTGGCTAGTAACTGTTCCTATGCAAATCGTTGAATTTTATCTAATTCTTGCAGCATGTACTGCTGTTAGTCTTGGAGTATTTTGGAAGCTTTTGGCTGGTTCATTAGTTATGCTTTTAGGAGGATATCTTGGTGAAACAGGAGTCGTATCAGCAATGGTCGGCTTTGTTGTCGGAATGGCTGGTTGGGTATTTATCATCTATTACATATTTGTAGGTGAAGCTGCTCAAATCAAAGATTCTGCAGGCAACGAAAACCTAGTAATGGCTTTCGACGGAATTAAATGGATCGTAACAATAGGTTGGGCCATCTATCCA SYIDWLVTVPMQIVEFYLILAACTAVSLGVFWKLLAGSLVMLLGGYLGETGVVSAMVGFVVGMAGWVFIIYYIFVGEAAQIKDSAGNENLVMAFDGIKWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGACTGG------------------------CTAGTAACTGTTCCTATGCAAATCGTTGAATTTTATCTAATTCTTGCAGCA---------TGT---ACTGCTGTTAGTCTT---GGAGTA------------------------------------TTTTGGAAG---CTTTTGGCTGGTTCATTAGTTATGCTTTTAGGAGGATATCTTGGTGAA---------ACA------------------GGA------GTC---------------------------------GTA------------------------------------------------------------------TCAGCA------------------ATGGTCGGC---TTTGTTGTCGGAATGGCTGGTTGGGTATTTATCATCTATTACATA---------------TTT------GTA---GGTGAAGCTGCTCAAATCAAAGATTCT------GCA---GGCAACGAAAACCTA---GTA---ATG---GCT---TTC---GAC---GGAATT---AAATGGATCGTAACAATA---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LVTVPMQIVEFYLILAA---C-TAVSL-GV------------FWK-LLAGSLVMLLGGYLGE---T------G--V-----------V----------------------SA------MVG-FVVGMAGWVFIIYYI-----F--V-GEAAQIKDS--A-GNENL-V-M-A-F-D-GI-KWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ203708 [II-env7] medHO155E7_env_samples_DQ203708 gi|77547864|gb|DQ203708| Uncultured bacterium clone medHO155E7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155E7 predicted proteorhodopsin gene, partial cds DQ203708 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGCTACATTGATTGGCTAGTAACTGTTCCTATGCAAATCGTTGAATTTTATCTAATTCTTGCAGCATGTACTGCTGTTAGTCTTGGAGTATTTTGGAAGCTTTTGGCTGGTTCATTAGTTATGCTTTTAGGAGGATATCTTGGTGAAACAGGAGTCGTATCAGCAATGGTCGGCTTTGTTGTCGGAATGGCTGGTTGGGTATTTATCATCTATTACATATTTGTAGGTGAAGCTGCTCAAATCAAAGATTCTGCAGGCAACGAAAACCTAGTAATGGCTTTCGACGGAATTAAATGGATCGTAACAATAGGTTGGGCCATATATCCA RYIDWLVTVPMQIVEFYLILAACTAVSLGVFWKLLAGSLVMLLGGYLGETGVVSAMVGFVVGMAGWVFIIYYIFVGEAAQIKDSAGNENLVMAFDGIKWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTACATTGATTGG------------------------CTAGTAACTGTTCCTATGCAAATCGTTGAATTTTATCTAATTCTTGCAGCA---------TGT---ACTGCTGTTAGTCTT---GGAGTA------------------------------------TTTTGGAAG---CTTTTGGCTGGTTCATTAGTTATGCTTTTAGGAGGATATCTTGGTGAA---------ACA------------------GGA------GTC---------------------------------GTA------------------------------------------------------------------TCAGCA------------------ATGGTCGGC---TTTGTTGTCGGAATGGCTGGTTGGGTATTTATCATCTATTACATA---------------TTT------GTA---GGTGAAGCTGCTCAAATCAAAGATTCT------GCA---GGCAACGAAAACCTA---GTA---ATG---GCT---TTC---GAC---GGAATT---AAATGGATCGTAACAATA---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LVTVPMQIVEFYLILAA---C-TAVSL-GV------------FWK-LLAGSLVMLLGGYLGE---T------G--V-----------V----------------------SA------MVG-FVVGMAGWVFIIYYI-----F--V-GEAAQIKDS--A-GNENL-V-M-A-F-D-GI-KWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ203535 [II-env7] MedHO1202D8_env_samples_DQ203535 gi|77547518|gb|DQ203535| Uncultured bacterium clone MedHO1202D8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202D8 predicted proteorhodopsin gene, partial cds DQ203535 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAGTAACTGTTCCTATGCAAATTGTTGAATTTTATCTAATTCTTGCAGCATGTACTGCTGTTAGTCTTGGAGTATTTTGGAAGCTTTTAGGCGGTTCATTAGTTATGCTTTTAGGAGGATATCTTGGTGAAACTGGAGCTGTATCAGAAATGGTCGGCTTTATCGTCGGAATGGCTGGTTGGGTATTTATCATTTATTACATATTTGTAGGTGAAGCTGCTCAAATCAAAGATTCTGCAGGTAACGAAAACCTAGTAATGGCTTTCGACGGAATTAAATGGATTGTAACAATAGGGTGGGCCATCTATCCA RYIDWLVTVPMQIVEFYLILAACTAVSLGVFWKLLGGSLVMLLGGYLGETGAVSEMVGFIVGMAGWVFIIYYIFVGEAAQIKDSAGNENLVMAFDGIKWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAGTAACTGTTCCTATGCAAATTGTTGAATTTTATCTAATTCTTGCAGCA---------TGT---ACTGCTGTTAGTCTT---GGAGTA------------------------------------TTTTGGAAG---CTTTTAGGCGGTTCATTAGTTATGCTTTTAGGAGGATATCTTGGTGAA---------ACT------------------GGA------GCT---------------------------------GTA------------------------------------------------------------------TCAGAA------------------ATGGTCGGC---TTTATCGTCGGAATGGCTGGTTGGGTATTTATCATTTATTACATA---------------TTT------GTA---GGTGAAGCTGCTCAAATCAAAGATTCT------GCA---GGTAACGAAAACCTA---GTA---ATG---GCT---TTC---GAC---GGAATT---AAATGGATTGTAACAATA---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LVTVPMQIVEFYLILAA---C-TAVSL-GV------------FWK-LLGGSLVMLLGGYLGE---T------G--A-----------V----------------------SE------MVG-FIVGMAGWVFIIYYI-----F--V-GEAAQIKDS--A-GNENL-V-M-A-F-D-GI-KWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ203568 [II-env7] MedHO1202G8_env_samples_DQ203568 gi|77547584|gb|DQ203568| Uncultured bacterium clone MedHO1202G8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202G8 predicted proteorhodopsin gene, partial cds DQ203568 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGATTGGCTAGTAACTGTTCCTATGCAAATTGTTGAATTTTATCTAATTCTTGCAGCATGTACTGCTGTTAGTCTTGGAGTATTTTGGAAGCTTTTAGGCGGTTCATTAGTTATGCCTTTAGGAGGATATCTTGGTGAAACTGGAGCTGTATCAGAAATGGTCGGCTTTATCGTCGGAATGGCTGGTTGGGTATTTATCATTTATTACATATTTGTAGGTGAAGCTGCTCAAATCAAAGATTCTGCAGGTAACGAAAACCTAGTAATGGCTTTCGACGGAATTAAATGGATTGTAACAATAGGGTGGGCCATTTACCCA SYIDWLVTVPMQIVEFYLILAACTAVSLGVFWKLLGGSLVMPLGGYLGETGAVSEMVGFIVGMAGWVFIIYYIFVGEAAQIKDSAGNENLVMAFDGIKWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGATTGG------------------------CTAGTAACTGTTCCTATGCAAATTGTTGAATTTTATCTAATTCTTGCAGCA---------TGT---ACTGCTGTTAGTCTT---GGAGTA------------------------------------TTTTGGAAG---CTTTTAGGCGGTTCATTAGTTATGCCTTTAGGAGGATATCTTGGTGAA---------ACT------------------GGA------GCT---------------------------------GTA------------------------------------------------------------------TCAGAA------------------ATGGTCGGC---TTTATCGTCGGAATGGCTGGTTGGGTATTTATCATTTATTACATA---------------TTT------GTA---GGTGAAGCTGCTCAAATCAAAGATTCT------GCA---GGTAACGAAAACCTA---GTA---ATG---GCT---TTC---GAC---GGAATT---AAATGGATTGTAACAATA---------------------------------------------------------------GGGTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LVTVPMQIVEFYLILAA---C-TAVSL-GV------------FWK-LLGGSLVMPLGGYLGE---T------G--A-----------V----------------------SE------MVG-FIVGMAGWVFIIYYI-----F--V-GEAAQIKDS--A-GNENL-V-M-A-F-D-GI-KWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ203668 [II-env7] medHO155A6_env_samples_DQ203668 gi|77547784|gb|DQ203668| Uncultured bacterium clone medHO155A6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155A6 predicted proteorhodopsin gene, partial cds DQ203668 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAGTAACTGTTCCTATGCAAATCGTTGAATTTTATCTAATTCTTGCAGCATGTACTGCTGTTAGTCTTGGAGTATTTTGGAAGCTTTTAGGCGGTTCATTAGTTATGCTTTTAGGAGGATATCTTGGTGAAACTGGAGCTGTATCAGAAATGGTCGGCTTTATCGTCGGAATGGCTGGTTGGGTATTTATCATTTATTACATATTTGTAGGTGAAGCTGCTCAAATCAAAGATTCTGCAGGTAACGAAAACCTAGTAATGGCTTTCGACGGAATTAAATGGATTGTAACAATAGGCTGGGCCATCTATCCA RYIDWLVTVPMQIVEFYLILAACTAVSLGVFWKLLGGSLVMLLGGYLGETGAVSEMVGFIVGMAGWVFIIYYIFVGEAAQIKDSAGNENLVMAFDGIKWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAGTAACTGTTCCTATGCAAATCGTTGAATTTTATCTAATTCTTGCAGCA---------TGT---ACTGCTGTTAGTCTT---GGAGTA------------------------------------TTTTGGAAG---CTTTTAGGCGGTTCATTAGTTATGCTTTTAGGAGGATATCTTGGTGAA---------ACT------------------GGA------GCT---------------------------------GTA------------------------------------------------------------------TCAGAA------------------ATGGTCGGC---TTTATCGTCGGAATGGCTGGTTGGGTATTTATCATTTATTACATA---------------TTT------GTA---GGTGAAGCTGCTCAAATCAAAGATTCT------GCA---GGTAACGAAAACCTA---GTA---ATG---GCT---TTC---GAC---GGAATT---AAATGGATTGTAACAATA---------------------------------------------------------------GGCTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LVTVPMQIVEFYLILAA---C-TAVSL-GV------------FWK-LLGGSLVMLLGGYLGE---T------G--A-----------V----------------------SE------MVG-FIVGMAGWVFIIYYI-----F--V-GEAAQIKDS--A-GNENL-V-M-A-F-D-GI-KWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ203570 [II-env7] MedHO1202H1_env_samples_DQ203570 gi|77547588|gb|DQ203570| Uncultured bacterium clone MedHO1202H1 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202H1 predicted proteorhodopsin gene, partial cds DQ203570 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAGTAACTGTTCCTATGCAAATCGTTGAATTTTATCTAATTCTTGCAGCATGTACTGCTGTTAGTCTTGGAGTATTTTGGAAGCTTTTAGGCGGTTCATTAGTTATGCTTTTAGGAGGATATCTTGGTGAAACTGGAGCTGTATCAGAAATGGTCGGCTTTATCGTCGGAATGGCTGGTTGGGTATTTATCATTTATTACATATTTGTAGGTGAAGCTGCTCAAATCAAAGATTCTGCAGGTAACGAAAACCTAGTAATGGCTTTCGACGGAATTAAATGGATTGTAACAATAGGGTGGGCCATCTATCCA RYIDWLVTVPMQIVEFYLILAACTAVSLGVFWKLLGGSLVMLLGGYLGETGAVSEMVGFIVGMAGWVFIIYYIFVGEAAQIKDSAGNENLVMAFDGIKWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAGTAACTGTTCCTATGCAAATCGTTGAATTTTATCTAATTCTTGCAGCA---------TGT---ACTGCTGTTAGTCTT---GGAGTA------------------------------------TTTTGGAAG---CTTTTAGGCGGTTCATTAGTTATGCTTTTAGGAGGATATCTTGGTGAA---------ACT------------------GGA------GCT---------------------------------GTA------------------------------------------------------------------TCAGAA------------------ATGGTCGGC---TTTATCGTCGGAATGGCTGGTTGGGTATTTATCATTTATTACATA---------------TTT------GTA---GGTGAAGCTGCTCAAATCAAAGATTCT------GCA---GGTAACGAAAACCTA---GTA---ATG---GCT---TTC---GAC---GGAATT---AAATGGATTGTAACAATA---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LVTVPMQIVEFYLILAA---C-TAVSL-GV------------FWK-LLGGSLVMLLGGYLGE---T------G--A-----------V----------------------SE------MVG-FIVGMAGWVFIIYYI-----F--V-GEAAQIKDS--A-GNENL-V-M-A-F-D-GI-KWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ203385 [II-env7] MedHO102D9_env_samples_DQ203385 gi|77547218|gb|DQ203385| Uncultured bacterium clone MedHO102D9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102D9 predicted proteorhodopsin gene, partial cds DQ203385 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATACATTGATTGGCTAGTAACTGTTCCTATGCAAATCGTTGAATTTTATCTAATTCTTGCAGCATGTACTGCTGTTAGTCTTGGAGTATTTTGGAAGCTTTTAGGCGGTTCATTAGTTATGCTTTTAGGAGGATATCTTGGTGAAACTGGAGCTGTATCAGAAATGGTCGGCTTTATCGTCGGAATGGCTGGTTGGGTATTTATCATTTATTACATATTTGTAGGTGAAGCTGCTCAAATCAAAGATTCTGCAGGTAACGAAAACCTAGTAATGGCTTTCGACGGAATTAAATGGATTGTAACAATAGGTTGGGCCATATACCCA RYIDWLVTVPMQIVEFYLILAACTAVSLGVFWKLLGGSLVMLLGGYLGETGAVSEMVGFIVGMAGWVFIIYYIFVGEAAQIKDSAGNENLVMAFDGIKWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATTGATTGG------------------------CTAGTAACTGTTCCTATGCAAATCGTTGAATTTTATCTAATTCTTGCAGCA---------TGT---ACTGCTGTTAGTCTT---GGAGTA------------------------------------TTTTGGAAG---CTTTTAGGCGGTTCATTAGTTATGCTTTTAGGAGGATATCTTGGTGAA---------ACT------------------GGA------GCT---------------------------------GTA------------------------------------------------------------------TCAGAA------------------ATGGTCGGC---TTTATCGTCGGAATGGCTGGTTGGGTATTTATCATTTATTACATA---------------TTT------GTA---GGTGAAGCTGCTCAAATCAAAGATTCT------GCA---GGTAACGAAAACCTA---GTA---ATG---GCT---TTC---GAC---GGAATT---AAATGGATTGTAACAATA---------------------------------------------------------------GGTTGG---------GCCATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LVTVPMQIVEFYLILAA---C-TAVSL-GV------------FWK-LLGGSLVMLLGGYLGE---T------G--A-----------V----------------------SE------MVG-FIVGMAGWVFIIYYI-----F--V-GEAAQIKDS--A-GNENL-V-M-A-F-D-GI-KWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ203633 [II-env7] medHO120F10_env_samples_DQ203633 gi|77547714|gb|DQ203633| Uncultured bacterium clone medHO120F10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120F10 predicted proteorhodopsin gene, partial cds DQ203633 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATACATTGATTGGCTAGTAACTGTTCCTATGCAAATCGTTGAATTTTATCTAATTCTTGCAGCATGTACTGCTGTTAGTCTTGGAGTATTTTGGAAGCTTTTAGGCGGTTCATTAGTTATGCTTTTAGGAGGATATCTTGGTGAAACTGGAGCTGTATCAGAAATGGTCGGCTTTATCGTCGGAATGGCTGGTTGGGTATTTATCATTTATTACATATTTGTAGGTGAAGCTGCTCAAATCAAAGATTCTGCAGGTAACGAAAACTTAGTAATGGCTTTCGACGGAATTAAATGGATTGTAACAATAGGTTGGGCCATATATCCA RYIDWLVTVPMQIVEFYLILAACTAVSLGVFWKLLGGSLVMLLGGYLGETGAVSEMVGFIVGMAGWVFIIYYIFVGEAAQIKDSAGNENLVMAFDGIKWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATTGATTGG------------------------CTAGTAACTGTTCCTATGCAAATCGTTGAATTTTATCTAATTCTTGCAGCA---------TGT---ACTGCTGTTAGTCTT---GGAGTA------------------------------------TTTTGGAAG---CTTTTAGGCGGTTCATTAGTTATGCTTTTAGGAGGATATCTTGGTGAA---------ACT------------------GGA------GCT---------------------------------GTA------------------------------------------------------------------TCAGAA------------------ATGGTCGGC---TTTATCGTCGGAATGGCTGGTTGGGTATTTATCATTTATTACATA---------------TTT------GTA---GGTGAAGCTGCTCAAATCAAAGATTCT------GCA---GGTAACGAAAACTTA---GTA---ATG---GCT---TTC---GAC---GGAATT---AAATGGATTGTAACAATA---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LVTVPMQIVEFYLILAA---C-TAVSL-GV------------FWK-LLGGSLVMLLGGYLGE---T------G--A-----------V----------------------SE------MVG-FIVGMAGWVFIIYYI-----F--V-GEAAQIKDS--A-GNENL-V-M-A-F-D-GI-KWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ203641 [II-env7] medHO120G1_env_samples_DQ203641 gi|77547730|gb|DQ203641| Uncultured bacterium clone medHO120G1 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120G1 predicted proteorhodopsin gene, partial cds DQ203641 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAGTAACTGTTCCTATGCAAATCGTTGAATTTTATCTAATTCTTGCAGCATGTACTGCTGTTAGTCTTGGGGTATTTTGGAAGCTTTTAGGCGGTTCATTAGTTATGCTTTTAGGAGGATATCTTGGTGAAACTGGAGCTGTATCAGAAATGGTCGGCTTTATCGTCGGAATGGCTGGTTGGGTATTTATCATTTATTACATATTTGTAGGTGAAGCTGCTCAAATCAAAGATTCTGCAGGTAACGAAAACCTAGTAATGGCTTTCGACGGAATTAAATGGATTGTAACAATAGGTTGGGCCATATATCCA RYIDWLVTVPMQIVEFYLILAACTAVSLGVFWKLLGGSLVMLLGGYLGETGAVSEMVGFIVGMAGWVFIIYYIFVGEAAQIKDSAGNENLVMAFDGIKWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAGTAACTGTTCCTATGCAAATCGTTGAATTTTATCTAATTCTTGCAGCA---------TGT---ACTGCTGTTAGTCTT---GGGGTA------------------------------------TTTTGGAAG---CTTTTAGGCGGTTCATTAGTTATGCTTTTAGGAGGATATCTTGGTGAA---------ACT------------------GGA------GCT---------------------------------GTA------------------------------------------------------------------TCAGAA------------------ATGGTCGGC---TTTATCGTCGGAATGGCTGGTTGGGTATTTATCATTTATTACATA---------------TTT------GTA---GGTGAAGCTGCTCAAATCAAAGATTCT------GCA---GGTAACGAAAACCTA---GTA---ATG---GCT---TTC---GAC---GGAATT---AAATGGATTGTAACAATA---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LVTVPMQIVEFYLILAA---C-TAVSL-GV------------FWK-LLGGSLVMLLGGYLGE---T------G--A-----------V----------------------SE------MVG-FIVGMAGWVFIIYYI-----F--V-GEAAQIKDS--A-GNENL-V-M-A-F-D-GI-KWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ203614 [II-env7] medHO120D12_env_samples_DQ203614 gi|77547676|gb|DQ203614| Uncultured bacterium clone medHO120D12 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120D12 predicted proteorhodopsin gene, partial cds DQ203614 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAGTAACTGTTCCTATGCAAATCGTTGAATTTTATCTAATTCTTGCAGCATGTACTGCTGTTAGTCTTGGAGTATTTTGGAAGCTTTTAGGCGGTTCATTAGTTATGCTTTTAGGAGGATATCTTGGTGAAACTGGAGCTGTATCAGAAATGGTCGGCTTTATCGTCGGAATGGCTGGTTGGGTATTTATCATTTATTACATATTTGTAGGTGAAGCTGCTCAAATCAAAGATTCTGCAGGTAACGAAAACCTAGTAATGGCTTTCGACGGAATTAAATGGATTGTAACAATAGGTTGGGCAATATATCCA RYIDWLVTVPMQIVEFYLILAACTAVSLGVFWKLLGGSLVMLLGGYLGETGAVSEMVGFIVGMAGWVFIIYYIFVGEAAQIKDSAGNENLVMAFDGIKWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAGTAACTGTTCCTATGCAAATCGTTGAATTTTATCTAATTCTTGCAGCA---------TGT---ACTGCTGTTAGTCTT---GGAGTA------------------------------------TTTTGGAAG---CTTTTAGGCGGTTCATTAGTTATGCTTTTAGGAGGATATCTTGGTGAA---------ACT------------------GGA------GCT---------------------------------GTA------------------------------------------------------------------TCAGAA------------------ATGGTCGGC---TTTATCGTCGGAATGGCTGGTTGGGTATTTATCATTTATTACATA---------------TTT------GTA---GGTGAAGCTGCTCAAATCAAAGATTCT------GCA---GGTAACGAAAACCTA---GTA---ATG---GCT---TTC---GAC---GGAATT---AAATGGATTGTAACAATA---------------------------------------------------------------GGTTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LVTVPMQIVEFYLILAA---C-TAVSL-GV------------FWK-LLGGSLVMLLGGYLGE---T------G--A-----------V----------------------SE------MVG-FIVGMAGWVFIIYYI-----F--V-GEAAQIKDS--A-GNENL-V-M-A-F-D-GI-KWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [II-env7]_DQ203852 [II-env7] SS114a40H8_env_samples_DQ203852 gi|77548152|gb|DQ203852| Uncultured bacterium clone SS114a40H8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40H8 predicted proteorhodopsin gene, partial cds DQ203852 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTACATTGATTGGCTAGTAACTGTTCCTATGCAAATCGTTGAATTTTATCTAATTCTTGCAGCATGTACTGCTGTTAGTCTTGGAGTATTTTGGAAGCTTTTAGGCGGTTCATTAGTTATGCTTTTAGGAGGATATCTTGGTGAAACTGGAGTTGTATCAGAAATGGTCGGCTTTATCGTCGGAATGGCTGGTTGGGTATTTATCATTTATTACATATTTGTAGGTGAAGCTGCTCAAATCAAAGATTCTGCAGGTAACGAAAACCTAGTAATGGCTTTCGACGGAATTAAATGGATTGTAACAATAGGTTGGGCAATATATCCA RYIDWLVTVPMQIVEFYLILAACTAVSLGVFWKLLGGSLVMLLGGYLGETGVVSEMVGFIVGMAGWVFIIYYIFVGEAAQIKDSAGNENLVMAFDGIKWIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATTGATTGG------------------------CTAGTAACTGTTCCTATGCAAATCGTTGAATTTTATCTAATTCTTGCAGCA---------TGT---ACTGCTGTTAGTCTT---GGAGTA------------------------------------TTTTGGAAG---CTTTTAGGCGGTTCATTAGTTATGCTTTTAGGAGGATATCTTGGTGAA---------ACT------------------GGA------GTT---------------------------------GTA------------------------------------------------------------------TCAGAA------------------ATGGTCGGC---TTTATCGTCGGAATGGCTGGTTGGGTATTTATCATTTATTACATA---------------TTT------GTA---GGTGAAGCTGCTCAAATCAAAGATTCT------GCA---GGTAACGAAAACCTA---GTA---ATG---GCT---TTC---GAC---GGAATT---AAATGGATTGTAACAATA---------------------------------------------------------------GGTTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LVTVPMQIVEFYLILAA---C-TAVSL-GV------------FWK-LLGGSLVMLLGGYLGE---T------G--V-----------V----------------------SE------MVG-FIVGMAGWVFIIYYI-----F--V-GEAAQIKDS--A-GNENL-V-M-A-F-D-GI-KWIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_FJ618952 [unk-Proteo1-b] PR_108_08_08_env_samples_FJ618952 gi|223046787|gb|FJ618952| Uncultured bacterium clone PR 108 08 08 proteorhodopsin gene, partial cds Uncultured bacterium clone PR 108 08 08 proteorhodopsin gene, partial cds FJ618952 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-juil-09 #na Arctic_Ocean Arctic Ocean marine 71.37 -156.68 Photoheterotrophic microbes in the Arctic Ocean in summer and winter Cottrell,M.T. and Kirchman,D.L. Appl. Environ. Microbiol. 75 (15), 49584966 (2009) 19502441 #na TACATTGATTGGCTCATCACAGTGCCGTTATTGATGATCGAATTTTTCATTATACTAAAAGCGGTTGGCGCGGCCGTCAGTACAGGTTCGTTCCTTCGGTTGTTGGTCGGCACCTTGGTTATGCTTATCTTCGGCTATTTAGGCGAAGCGGGCGTTATGAATCCAACAATCGCCTTCTGGATAGGCATGGTCGGTTGGGCTGTGATCATCTATGAAATCTTTGCGGGTGAAGCGTCAAAGGCGGCGGCAGCAAACGAAAGCGTAAAGGCAGCCTTTGGTTACATGCGCTTAATCGTGCTGGTGGGATGGGCAATATAT YIDWLITVPLLMIEFFIILKAVGAAVSTGSFLRLLVGTLVMLIFGYLGEAGVMNPTIAFWIGMVGWAVIIYEIFAGEASKAAAANESVKAAFGYMRLIVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACATTGATTGG------------------------CTCATCACAGTGCCGTTATTGATGATCGAATTTTTCATTATACTAAAAGCG---------GTTGGCGCGGCCGTCAGTACA---GGTTCG------------------------------------TTCCTTCGG---TTGTTGGTCGGCACCTTGGTTATGCTTATCTTCGGCTATTTAGGCGAA---------GCG------------------GGC------GTT---------------------------------ATG------------------------------------------------------------------AATCCA------------------ACAATCGCC---TTCTGGATAGGCATGGTCGGTTGGGCTGTGATCATCTATGAAATC---------------TTT------GCG---GGTGAAGCGTCAAAGGCGGCG------------GCA---GCAAACGAAAGCGTA---AAG---GCA---GCC---TTT---GGT---TACATG---CGCTTAATCGTGCTGGTG---------------------------------------------------------------GGATGG---------GCAATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YIDW--------LITVPLLMIEFFIILKA---VGAAVST-GS------------FLR-LLVGTLVMLIFGYLGE---A------G--V-----------M----------------------NP------TIA-FWIGMVGWAVIIYEI-----F--A-GEASKAA----A-ANESV-K-A-A-F-G-YM-RLIVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_FJ618983 [unk-Proteo1-b] PR_707_07_19_env_samples_FJ618983 gi|223046849|gb|FJ618983| Uncultured bacterium clone PR 707 07 19 proteorhodopsin gene, partial cds Uncultured bacterium clone PR 707 07 19 proteorhodopsin gene, partial cds FJ618983 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-juil-09 #na Arctic_Ocean Arctic Ocean marine 71.37 -156.68 Photoheterotrophic microbes in the Arctic Ocean in summer and winter Cottrell,M.T. and Kirchman,D.L. Appl. Environ. Microbiol. 75 (15), 49584966 (2009) 19502441 #na TACGTTGATTGGCTCATCACAGTGCCGTTATTGATGATCGAATTTTTCATTATACTAAAAGCGGTTGGCGCGGCCGTCAGTACAGGTTCGTTCCTTCGGTTGTTGGTCGGCACCTTGGTTATGCTTATCTTCGGCTATTTAGGCGAAGCGGGCGTTATGAATTCAACAATCGCCTTCTGGATAGGCATGGTCGGTTGGGCTGTGATCATCTATGAAATCTTTGCGGGTGAAGCGTCAAAGGCGGCGGCGGCAAACGAAAGCGTAAAGGCAGCCTTTGGTTACATGCGCTTAATCGTGCTGGTGGGGTGGGCGATTTAT YVDWLITVPLLMIEFFIILKAVGAAVSTGSFLRLLVGTLVMLIFGYLGEAGVMNSTIAFWIGMVGWAVIIYEIFAGEASKAAAANESVKAAFGYMRLIVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACGTTGATTGG------------------------CTCATCACAGTGCCGTTATTGATGATCGAATTTTTCATTATACTAAAAGCG---------GTTGGCGCGGCCGTCAGTACA---GGTTCG------------------------------------TTCCTTCGG---TTGTTGGTCGGCACCTTGGTTATGCTTATCTTCGGCTATTTAGGCGAA---------GCG------------------GGC------GTT---------------------------------ATG------------------------------------------------------------------AATTCA------------------ACAATCGCC---TTCTGGATAGGCATGGTCGGTTGGGCTGTGATCATCTATGAAATC---------------TTT------GCG---GGTGAAGCGTCAAAGGCGGCG------------GCG---GCAAACGAAAGCGTA---AAG---GCA---GCC---TTT---GGT---TACATG---CGCTTAATCGTGCTGGTG---------------------------------------------------------------GGGTGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LITVPLLMIEFFIILKA---VGAAVST-GS------------FLR-LLVGTLVMLIFGYLGE---A------G--V-----------M----------------------NS------TIA-FWIGMVGWAVIIYEI-----F--A-GEASKAA----A-ANESV-K-A-A-F-G-YM-RLIVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_FJ618985 [unk-Proteo1-b] PR_707_07_21_env_samples_FJ618985 gi|223046853|gb|FJ618985| Uncultured bacterium clone PR 707 07 21 proteorhodopsin gene, partial cds Uncultured bacterium clone PR 707 07 21 proteorhodopsin gene, partial cds FJ618985 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-juil-09 #na Arctic_Ocean Arctic Ocean marine 71.37 -156.68 Photoheterotrophic microbes in the Arctic Ocean in summer and winter Cottrell,M.T. and Kirchman,D.L. Appl. Environ. Microbiol. 75 (15), 49584966 (2009) 19502441 #na TATATTGATTGGCTCATCACAGTGCCGTTATTGATGATCGAATTTTTCATTATACTAAAAGCGGTTGGCGCGGCCGTCAGTACAGGTTCGTTCCTTCGGTTGTTGGTCGGCACCTTGGTTATGCTTATCTTCGGCTATTTAGGCGAAGCGGGCGTTATGAATTCAACAATTGCCTTCTGGATAGGCATGGTCGGTTGGGCTGTGATCATCTATGAAATCTTTGCGGGTGAAGCGTCAAAGGCGGCGGCGGCAAACGAAAGCGTAAAGGCAGCCTTTGGTTACATGCGCTTAATCGTGCTGGTGGGGTGGGCCATCTAC YIDWLITVPLLMIEFFIILKAVGAAVSTGSFLRLLVGTLVMLIFGYLGEAGVMNSTIAFWIGMVGWAVIIYEIFAGEASKAAAANESVKAAFGYMRLIVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATTGATTGG------------------------CTCATCACAGTGCCGTTATTGATGATCGAATTTTTCATTATACTAAAAGCG---------GTTGGCGCGGCCGTCAGTACA---GGTTCG------------------------------------TTCCTTCGG---TTGTTGGTCGGCACCTTGGTTATGCTTATCTTCGGCTATTTAGGCGAA---------GCG------------------GGC------GTT---------------------------------ATG------------------------------------------------------------------AATTCA------------------ACAATTGCC---TTCTGGATAGGCATGGTCGGTTGGGCTGTGATCATCTATGAAATC---------------TTT------GCG---GGTGAAGCGTCAAAGGCGGCG------------GCG---GCAAACGAAAGCGTA---AAG---GCA---GCC---TTT---GGT---TACATG---CGCTTAATCGTGCTGGTG---------------------------------------------------------------GGGTGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YIDW--------LITVPLLMIEFFIILKA---VGAAVST-GS------------FLR-LLVGTLVMLIFGYLGE---A------G--V-----------M----------------------NS------TIA-FWIGMVGWAVIIYEI-----F--A-GEASKAA----A-ANESV-K-A-A-F-G-YM-RLIVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_FJ618950 [unk-Proteo1-b] PR_108_08_06_env_samples_FJ618950 gi|223046783|gb|FJ618950| Uncultured bacterium clone PR 108 08 06 proteorhodopsin gene, partial cds Uncultured bacterium clone PR 108 08 06 proteorhodopsin gene, partial cds FJ618950 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-juil-09 #na Arctic_Ocean Arctic Ocean marine 71.37 -156.68 Photoheterotrophic microbes in the Arctic Ocean in summer and winter Cottrell,M.T. and Kirchman,D.L. Appl. Environ. Microbiol. 75 (15), 49584966 (2009) 19502441 #na TATATAGACTGGCTCATCACAGTGCCGTTATTGATGATCGAATTTTTCATTATACTAAAAGCGGTTGGCGCGGCCGTCAGTACAGGTTCGTTCCTTCGGTTGTTGGTCGGCACCTTGGTTATGCTTATCTTCGGCTATTTAGGCGAAGCGGGCGTTATGCAGAATTCAACAATCGCCTTCTGGATAGGCATGGTCGGTTGGGCTGTGATCATCTATGAAATCTTTGCGGGTGAAGCGTCAAAGGCGGCGGCGGCAAACGAAAGCGTAAAGGCAGCATTTGGTTACATGCGCTTAATCGTGCTGGTGGGCTGGGCCATTTAC YIDWLITVPLLMIEFFIILKAVGAAVSTGSFLRLLVGTLVMLIFGYLGEAGVMQNSTIAFWIGMVGWAVIIYEIFAGEASKAAAANESVKAAFGYMRLIVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATAGACTGG------------------------CTCATCACAGTGCCGTTATTGATGATCGAATTTTTCATTATACTAAAAGCG---------GTTGGCGCGGCCGTCAGTACA---GGTTCG------------------------------------TTCCTTCGG---TTGTTGGTCGGCACCTTGGTTATGCTTATCTTCGGCTATTTAGGCGAA---------GCG------------------GGC------GTT---------------------------------ATG---------------------------------------------------------------CAGAATTCA------------------ACAATCGCC---TTCTGGATAGGCATGGTCGGTTGGGCTGTGATCATCTATGAAATC---------------TTT------GCG---GGTGAAGCGTCAAAGGCGGCG------------GCG---GCAAACGAAAGCGTA---AAG---GCA---GCA---TTT---GGT---TACATG---CGCTTAATCGTGCTGGTG---------------------------------------------------------------GGCTGG---------GCCATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YIDW--------LITVPLLMIEFFIILKA---VGAAVST-GS------------FLR-LLVGTLVMLIFGYLGE---A------G--V-----------M---------------------QNS------TIA-FWIGMVGWAVIIYEI-----F--A-GEASKAA----A-ANESV-K-A-A-F-G-YM-RLIVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_FJ618975 [unk-Proteo1-b] PR_707_07_10_env_samples_FJ618975 gi|223046833|gb|FJ618975| Uncultured bacterium clone PR 707 07 10 proteorhodopsin gene, partial cds Uncultured bacterium clone PR 707 07 10 proteorhodopsin gene, partial cds FJ618975 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-juil-09 #na Arctic_Ocean Arctic Ocean marine 71.37 -156.68 Photoheterotrophic microbes in the Arctic Ocean in summer and winter Cottrell,M.T. and Kirchman,D.L. Appl. Environ. Microbiol. 75 (15), 49584966 (2009) 19502441 #na TATATTGATTGGCTCATCACAGTGCCGTTATTGATGATCGAATTTTTCATTATACTAAAAGCGGTTGGCGCGGCCGTCAGTACAGGTTCGTTCCTTCGGTTGTTGGTCGGCACCTTGGTTATGCTTATCTTCGGCTATTTAGGCGAAGCGGGCGTTATGAATTCAACAATCGCCTTCTGGATAGGCATGGTCGGTTGGGCTGTGATCATCTATGAAATCTTTGCGGGTGAAGCGTCAAAGGCGGCAGCGGCAAACGAAAGCGTAAAGGCAGCATTTGGTTACATGCGCTTAATCGTGCTGGTGGGATGGGCGATCTAC YIDWLITVPLLMIEFFIILKAVGAAVSTGSFLRLLVGTLVMLIFGYLGEAGVMNSTIAFWIGMVGWAVIIYEIFAGEASKAAAANESVKAAFGYMRLIVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATTGATTGG------------------------CTCATCACAGTGCCGTTATTGATGATCGAATTTTTCATTATACTAAAAGCG---------GTTGGCGCGGCCGTCAGTACA---GGTTCG------------------------------------TTCCTTCGG---TTGTTGGTCGGCACCTTGGTTATGCTTATCTTCGGCTATTTAGGCGAA---------GCG------------------GGC------GTT---------------------------------ATG------------------------------------------------------------------AATTCA------------------ACAATCGCC---TTCTGGATAGGCATGGTCGGTTGGGCTGTGATCATCTATGAAATC---------------TTT------GCG---GGTGAAGCGTCAAAGGCGGCA------------GCG---GCAAACGAAAGCGTA---AAG---GCA---GCA---TTT---GGT---TACATG---CGCTTAATCGTGCTGGTG---------------------------------------------------------------GGATGG---------GCGATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YIDW--------LITVPLLMIEFFIILKA---VGAAVST-GS------------FLR-LLVGTLVMLIFGYLGE---A------G--V-----------M----------------------NS------TIA-FWIGMVGWAVIIYEI-----F--A-GEASKAA----A-ANESV-K-A-A-F-G-YM-RLIVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_JX863288 [unk-Proteo1-b] MALINA_OTU27_328_L_env_samples_JX863288 gi|425477526|gb|JX863288| Uncultured bacterium clone MALINA OTU27 328 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU27 328 L putative proteorhodopsin mRNA, partial cds JX863288 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 02Aug2009 40m_depth Arctic Ocean marine 69.61 -138.23 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTCATCACAGTGCCGTTATTGATGATCGAATTTTTCATTATACTAAAAGCGGTTGGCGCGGCCGTCAGTACAGGTTCGTTCCTTCGGTTGTTGGTCGGCACCTTGGTTATGCTTATCTTCGGCTATTTAGGCGAAGCGGGCATTATGCAGAATTCGACAATCGCCTTCTGGATAGGCATGGTCGGTTGGGCTGTGATCATCTATGAAATCTTTGCGGGTGAAGCGTCAAAGGCGGCGGCGGCAAACGAAAGCGTAAAGGCGGCATTTGGTTACATGCGCTTAATCGTGCTGGTG WLITVPLLMIEFFIILKAVGAAVSTGSFLRLLVGTLVMLIFGYLGEAGIMQNSTIAFWIGMVGWAVIIYEIFAGEASKAAAANESVKAAFGYMRLIVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTCATCACAGTGCCGTTATTGATGATCGAATTTTTCATTATACTAAAAGCG---------GTTGGCGCGGCCGTCAGTACA---GGTTCG------------------------------------TTCCTTCGG---TTGTTGGTCGGCACCTTGGTTATGCTTATCTTCGGCTATTTAGGCGAA---------GCG------------------GGC------ATT---------------------------------ATG---------------------------------------------------------------CAGAATTCG------------------ACAATCGCC---TTCTGGATAGGCATGGTCGGTTGGGCTGTGATCATCTATGAAATC---------------TTT------GCG---GGTGAAGCGTCAAAGGCGGCG------------GCG---GCAAACGAAAGCGTA---AAG---GCG---GCA---TTT---GGT---TACATG---CGCTTAATCGTGCTGGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFFIILKA---VGAAVST-GS------------FLR-LLVGTLVMLIFGYLGE---A------G--I-----------M---------------------QNS------TIA-FWIGMVGWAVIIYEI-----F--A-GEASKAA----A-ANESV-K-A-A-F-G-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_JX863190 [unk-Proteo1-b] MALINA_OTU27_312_L_env_samples_JX863190 gi|425477330|gb|JX863190| Uncultured bacterium clone MALINA OTU27 312 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU27 312 L putative proteorhodopsin gene, partial cds JX863190 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 11-juil-09 0m_depth Arctic Ocean marine 67.49 -168.12 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTCATCACTGTGCCGTTATTGATGATCGAATTTTTCATTATACTAAAAGCGGTTGGCGCGGCCGTCAGTACAGGTTCGTTCCTTCGGTTGTTGGTCGGCACCTTGGTTATGCTTATCTTCGGCTATTTAGGCGAAGCGGCTATTATGCCTTCAACAATCGCCTTCTGGATAGGCATGGTCGGTTGGGCTGTGATCATCTATGAAATCTTTGCGGGTGAAGCGTCAAAGGCGGCAGCGGCAAACGAAAGCGTAAAGGCAGCATTTGGTTACATGCGCTTAATCGTGCTGGTG WLITVPLLMIEFFIILKAVGAAVSTGSFLRLLVGTLVMLIFGYLGEAAIMPSTIAFWIGMVGWAVIIYEIFAGEASKAAAANESVKAAFGYMRLIVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTCATCACTGTGCCGTTATTGATGATCGAATTTTTCATTATACTAAAAGCG---------GTTGGCGCGGCCGTCAGTACA---GGTTCG------------------------------------TTCCTTCGG---TTGTTGGTCGGCACCTTGGTTATGCTTATCTTCGGCTATTTAGGCGAA---------GCG------------------GCT------ATT---------------------------------ATG------------------------------------------------------------------CCTTCA------------------ACAATCGCC---TTCTGGATAGGCATGGTCGGTTGGGCTGTGATCATCTATGAAATC---------------TTT------GCG---GGTGAAGCGTCAAAGGCGGCA------------GCG---GCAAACGAAAGCGTA---AAG---GCA---GCA---TTT---GGT---TACATG---CGCTTAATCGTGCTGGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFFIILKA---VGAAVST-GS------------FLR-LLVGTLVMLIFGYLGE---A------A--I-----------M----------------------PS------TIA-FWIGMVGWAVIIYEI-----F--A-GEASKAA----A-ANESV-K-A-A-F-G-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_JX863287 [unk-Proteo1-b] MALINA_OTU27_137_L_env_samples_JX863287 gi|425477524|gb|JX863287| Uncultured bacterium clone MALINA OTU27 137 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU27 137 L putative proteorhodopsin mRNA, partial cds JX863287 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 08Aug2009 50m_depth Arctic Ocean marine 70.8 -133.73 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTCATCACTGTGCCGTTATTGATGATCGAATTTTTCATTATACTAAAAGCGGTCGGCGCGGCCGTCAGTACAGGTTCGTTCCTTCGGTTGTTGGTCGGCACCTTGGTTATGCTTATCTTCGGCTATCTAGGCGAAGCAGGCGTTATGAATTCAACAATCGCCTTCTGGATAGGCATGGTCGGTTGGGCTGTGGTCATCTATGAAATCTTTGCGGGTGAAGCGTCAAAGGCGGCGGCGGCAAACGAAAGCGTAAAGGCAGCATTTGGTTACATGCGCTTAATCGTGCTGGTG WLITVPLLMIEFFIILKAVGAAVSTGSFLRLLVGTLVMLIFGYLGEAGVMNSTIAFWIGMVGWAVVIYEIFAGEASKAAAANESVKAAFGYMRLIVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTCATCACTGTGCCGTTATTGATGATCGAATTTTTCATTATACTAAAAGCG---------GTCGGCGCGGCCGTCAGTACA---GGTTCG------------------------------------TTCCTTCGG---TTGTTGGTCGGCACCTTGGTTATGCTTATCTTCGGCTATCTAGGCGAA---------GCA------------------GGC------GTT---------------------------------ATG------------------------------------------------------------------AATTCA------------------ACAATCGCC---TTCTGGATAGGCATGGTCGGTTGGGCTGTGGTCATCTATGAAATC---------------TTT------GCG---GGTGAAGCGTCAAAGGCGGCG------------GCG---GCAAACGAAAGCGTA---AAG---GCA---GCA---TTT---GGT---TACATG---CGCTTAATCGTGCTGGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFFIILKA---VGAAVST-GS------------FLR-LLVGTLVMLIFGYLGE---A------G--V-----------M----------------------NS------TIA-FWIGMVGWAVVIYEI-----F--A-GEASKAA----A-ANESV-K-A-A-F-G-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ926208 [unk-Proteo1-b] RHOMEO_AG_OTU23 gb|KJ926208| Uncultured bacterium cloneRHOMEO AG OTU23 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU23 putative proteorhodopsin gene, partial cds KJ926208 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGCTGATTACAGTGCCGTTGTTGATGATCGAGTTTTTCATCATTCTTAAAGCAGTAGGCGCAGCCGTAGGTAATGGGTCCTTCCTACGTTTGCTCGTCGGTACGCTTGTCATGCTGATATTCGGTTACTTCGGTGAAGCTGGCGTGATGGACTCTACCATCGCATTCGTGATTGGTATGGTAGGTTGGGCTATTATCATCTACGAAATCTTCGCGGGTGAAGCGTCCAAAGCGGCAGCGGCGACGGAAAGCGTCAAGGCGGCATTTGGTTACATGCGTCTGATCGTCCTGGTT WLITVPLLMIEFFIILKAVGAAVGNGSFLRLLVGTLVMLIFGYFGEAGVMDSTIAFVIGMVGWAIIIYEIFAGEASKAAAATESVKAAFGYMRLIVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATTACAGTGCCGTTGTTGATGATCGAGTTTTTCATCATTCTTAAAGCA---------GTAGGCGCAGCCGTAGGTAAT---GGGTCC------------------------------------TTCCTACGT---TTGCTCGTCGGTACGCTTGTCATGCTGATATTCGGTTACTTCGGTGAA---------GCT------------------GGC------GTG---------------------------------ATG------------------------------------------------------------------GACTCT------------------ACCATCGCA---TTCGTGATTGGTATGGTAGGTTGGGCTATTATCATCTACGAAATC---------------TTC------GCG---GGTGAAGCGTCCAAAGCGGCA------------GCG---GCGACGGAAAGCGTC---AAG---GCG---GCA---TTT---GGT---TACATG---CGTCTGATCGTCCTGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFFIILKA---VGAAVGN-GS------------FLR-LLVGTLVMLIFGYFGE---A------G--V-----------M----------------------DS------TIA-FVIGMVGWAIIIYEI-----F--A-GEASKAA----A-ATESV-K-A-A-F-G-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_FJ862939 [unk-Proteo1-b] 37_env_samples_FJ862939 gi|226897422|gb|FJ862939| Uncultured bacterium clone 37 putative proteorhodopsin gene, partial cds Uncultured bacterium clone 37 putative proteorhodopsin gene, partial cds FJ862939 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 07-Dec-2009 #na coastal_seawater Atlantic Ocean marine 38.8489 -75.1076 Lightdependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na ATAGACTGGCTGATCACCGTACCCCTACTGATGATCGAATTTTACATCATCTTGAAAGCGGTCGGCGCGTCGGTTAGTAGTGGCTCATTCATGCGACTCCTTGGCGGCACACTGGTTATGCTGATTTTTGGCTACCTGGGTGAAGCGGGTGTGATGAACAGCACTATCGCATTTTGGCTAGGTATGGTTGGTTGGGCCATTATCATCTACGAAATTTTTGCAGGTGAAGCTTCCAAGGCAGCGGCGGCCAACGAAAGTGTCAAGTCAGCATTCAACTACATGAGGTTAATTGTTCTTGTAGGCTGGGCCATCTACGCTCGA IDWLITVPLLMIEFYIILKAVGASVSSGSFMRLLGGTLVMLIFGYLGEAGVMNSTIAFWLGMVGWAIIIYEIFAGEASKAAAANESVKSAFNYMRLIVLVGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAGACTGG------------------------CTGATCACCGTACCCCTACTGATGATCGAATTTTACATCATCTTGAAAGCG---------GTCGGCGCGTCGGTTAGTAGT---GGCTCA------------------------------------TTCATGCGA---CTCCTTGGCGGCACACTGGTTATGCTGATTTTTGGCTACCTGGGTGAA---------GCG------------------GGT------GTG---------------------------------ATG------------------------------------------------------------------AACAGC------------------ACTATCGCA---TTTTGGCTAGGTATGGTTGGTTGGGCCATTATCATCTACGAAATT---------------TTT------GCA---GGTGAAGCTTCCAAGGCAGCG------------GCG---GCCAACGAAAGTGTC---AAG---TCA---GCA---TTC---AAC---TACATG---AGGTTAATTGTTCTTGTA---------------------------------------------------------------GGCTGG---------GCCATCTACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDW--------LITVPLLMIEFYIILKA---VGASVSS-GS------------FMR-LLGGTLVMLIFGYLGE---A------G--V-----------M----------------------NS------TIA-FWLGMVGWAIIIYEI-----F--A-GEASKAA----A-ANESV-K-S-A-F-N-YM-RLIVLV---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_FJ862944 [unk-Proteo1-b] 44_env_samples_FJ862944 gi|226897432|gb|FJ862944| Uncultured bacterium clone 44 putative proteorhodopsin gene, partial cds Uncultured bacterium clone 44 putative proteorhodopsin gene, partial cds FJ862944 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 07-Dec-2009 #na coastal_seawater Atlantic Ocean marine 38.8489 -75.1076 Lightdependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTTGACTGGCTGATCACCGTACCCCTATTGATGATAGAGTTTTACATCATCTTGAAAGCGGTCGGCGCGTCGGTTAGTAGTGGCTCATTCATGCGACTACTTGGCGGCACACTGGTTATGCTGATTTTTGGCTACCTGGGTGAAGCGGGTGTGATGAACAGCACTATCGCATTTTGGCTAGGTATGGTTGGTTGGGCTATTATCATCTACGAAATTTTTGCAGGTGAAGCTTCCAAGGCAGCGGCGGCCAACGAAAGTGTCAAGTCAGCATTCAACTACATGAGGTTAATTGTTCCTGTAGGCTGGGCGATCTACGCTCGA VDWLITVPLLMIEFYIILKAVGASVSSGSFMRLLGGTLVMLIFGYLGEAGVMNSTIAFWLGMVGWAIIIYEIFAGEASKAAAANESVKSAFNYMRLIVPVGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGACTGG------------------------CTGATCACCGTACCCCTATTGATGATAGAGTTTTACATCATCTTGAAAGCG---------GTCGGCGCGTCGGTTAGTAGT---GGCTCA------------------------------------TTCATGCGA---CTACTTGGCGGCACACTGGTTATGCTGATTTTTGGCTACCTGGGTGAA---------GCG------------------GGT------GTG---------------------------------ATG------------------------------------------------------------------AACAGC------------------ACTATCGCA---TTTTGGCTAGGTATGGTTGGTTGGGCTATTATCATCTACGAAATT---------------TTT------GCA---GGTGAAGCTTCCAAGGCAGCG------------GCG---GCCAACGAAAGTGTC---AAG---TCA---GCA---TTC---AAC---TACATG---AGGTTAATTGTTCCTGTA---------------------------------------------------------------GGCTGG---------GCGATCTACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPLLMIEFYIILKA---VGASVSS-GS------------FMR-LLGGTLVMLIFGYLGE---A------G--V-----------M----------------------NS------TIA-FWLGMVGWAIIIYEI-----F--A-GEASKAA----A-ANESV-K-S-A-F-N-YM-RLIVPV---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_1105103462892 [unk-Proteo1-b] JCVI_ORF_1105103462892_GS011_Estuary_1m jcvi|1105103462892| 1105103462892 JCVI ORF 1105103462892 1105103462892 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 18-nov-03 Estuary/1m_depth/S_n.a/GS011/Delaware_Bay/NJ/North_American_East_Coast Atlantic Ocean marine 39.417778 -75.504166 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATAAAAAAAACAAGCGTGGAGGTAGGGATGCAATTTTTAGCTGAAGGTGATTTGGTCGGTGTCTCGTTTTGGATCGTGTCGGTTGCGATGATCGCATCGACAGTGTTTTTCCTGTACGAGGGACTACGGGTTAAGAGTGAATGGCGGCTGTCTATGTTGGTGGCGGGTCTGGTTACGTTGGTCGCAGCAGTGCACTACGACTATATGCGAGATTATTGGGTGCTTGAGCAGAGTACACCAATCGTCTATCGATATATCGATTGGCTGATAACCGTGCCGCTTCTGATGATTGAATTTTGGATCATTCTAAAAGCCGTTGGCGCGTCAGTCGGCAGTGGTTCATTTATAAGACTCTTAGCGGGTACCTTGGTCATGCTGATTTTTGGCTATCTAGGCGAAGCCGGTGTTATGGATGCGACCTTAGGTTTCTGGATCGGAATGGTAGGTTGGGCCGTAATTATCTATGAGATCTTCGCAGGTGAAGCTGGCAAAGCTGCGGCAGCAACCGAGAGCGTTAAAGCTGCATTCGGGTATATGAGGCTGATCGTATTAGTGGGTTGGGCGATCTATCCGATTGGTTATGTAATGGGCTATATGATGGGTGGTGTCGATGAAGGCTCACTCAATATGGTTTATAACCTTGCAGACTTTGTGAATAAGATCCTCTTTGGATTGATTATTTGGAACCTTGCGTACAAAGATTCAGCAGAATCTAGCCAC IKKTSVEVGMQFLAEGDLVGVSFWIVSVAMIASTVFFLYEGLRVKSEWRLSMLVAGLVTLVAAVHYDYMRDYWVLEQSTPIVYRYIDWLITVPLLMIEFWIILKAVGASVGSGSFIRLLAGTLVMLIFGYLGEAGVMDATLGFWIGMVGWAVIIYEIFAGEAGKAAAATESVKAAFGYMRLIVLVGWAIYPIGYVMGYMMGGVDEGSLNMVYNLADFVNKILFGLIIWNLAYKDSAESSH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAAAAAAACAAGCGTGGAGGTAGGGATGCAATTTTTAGCTGAAGGTGATTTGGTCGGTGTCTCGTTTTGGATCGTGTCGGTTGCGATGATCGCATCGACAGTGTTTTTCCTGTACGAGGGACTACGGGTTAAGAGT---GAATGGCGGCTGTCTATGTTGGTGGCGGGTCTGGTTACGTTGGTCGCAGCAGTGCACTACGACTATATGCGAGATTATTGGGTG---------------------------------------------------CTTGAGCAGAGTACACCAATCGTCTATCGATATATCGATTGG------------------------CTGATAACCGTGCCGCTTCTGATGATTGAATTTTGGATCATTCTAAAAGCC---------GTTGGCGCGTCAGTCGGCAGT---GGTTCA------------------------------------TTTATAAGA---CTCTTAGCGGGTACCTTGGTCATGCTGATTTTTGGCTATCTAGGCGAA---------GCC------------------GGT------GTT---------------------------------ATG------------------------------------------------------------------GATGCG------------------ACCTTAGGT---TTCTGGATCGGAATGGTAGGTTGGGCCGTAATTATCTATGAGATC---------------TTC------GCA---GGTGAAGCTGGCAAAGCTGCG------------GCA---GCAACCGAGAGCGTT---AAA---GCT---GCA---TTC---GGG---TATATG---AGGCTGATCGTATTAGTG---------------------------------------------------------------GGTTGG---------GCGATCTATCCGATTGGTTATGTAATGGGCTATATG---------------------------------------ATGGGTGGTGTCGATGAAGGCTCACTCAATATGGTTTATAACCTTGCAGACTTTGTGAATAAGATCCTCTTTGGATTGATTATTTGGAACCTTGCGTACAAAGATTCAGCAGAATCTAGCCAC------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------IKKTSVEVGMQFLAEGDLVGVSFWIVSVAMIASTVFFLYEGLRVKS-EWRLSMLVAGLVTLVAAVHYDYMRDYWV-----------------LEQSTPIVYRYIDW--------LITVPLLMIEFWIILKA---VGASVGS-GS------------FIR-LLAGTLVMLIFGYLGE---A------G--V-----------M----------------------DA------TLG-FWIGMVGWAVIIYEI-----F--A-GEAGKAA----A-ATESV-K-A-A-F-G-YM-RLIVLV---------------------GW---AIYPIGYVMGYM-------------MGGVDEGSLNMVYNLADFVNKILFGLIIWNLAYKDSAESSH------------------------------------ [unk-Proteo1-b]_FJ560786 [unk-Proteo1-b] HEL53_env_samples_FJ560786 gi|223868719|gb|FJ560786| Uncultured microorganism clone HEL53 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL53 putative proteorhodopsin gene, partial cds FJ560786 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACCGTACCGCTTATGAAAATTGAATTTTGGATTATCTTAAAAGCTGTTGGCGCGTCAGTTGGCAGTGGTTCATTTGTTCGGCTCCTAGCAGGTACCTTGGTCATGTTGATTTTTGGTTATCTCGGCGAAGCCGGTGTCATGGATGCAACCTTAGGTTTCTGGCTAGGAATGGTAGGTTGGGCCGTAATTATCTATGAGATCTTCGCAGGTGAGGCTGGCAAAGCTGCTGCAGCGACAGAGAGTGTTAAATCAAAAAAGGGGGGGTATATGAGGCTG TVPLMKIEFWIILKAVGASVGSGSFVRLLAGTLVMLIFGYLGEAGVMDATLGFWLGMVGWAVIIYEIFAGEAGKAAAATESVKSKKGGYMRL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCGTACCGCTTATGAAAATTGAATTTTGGATTATCTTAAAAGCT---------GTTGGCGCGTCAGTTGGCAGT---GGTTCA------------------------------------TTTGTTCGG---CTCCTAGCAGGTACCTTGGTCATGTTGATTTTTGGTTATCTCGGCGAA---------GCC------------------GGT------GTC---------------------------------ATG------------------------------------------------------------------GATGCA------------------ACCTTAGGT---TTCTGGCTAGGAATGGTAGGTTGGGCCGTAATTATCTATGAGATC---------------TTC------GCA---GGTGAGGCTGGCAAAGCTGCT------------GCA---GCGACAGAGAGTGTT---AAA---TCAAAAAAG---GGG---GGG---TATATG---AGGCTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLMKIEFWIILKA---VGASVGS-GS------------FVR-LLAGTLVMLIFGYLGE---A------G--V-----------M----------------------DA------TLG-FWLGMVGWAVIIYEI-----F--A-GEAGKAA----A-ATESV-K-SKK-G-G-YM-RL------------------------------------------------------------------------------------------------------------------------------------ [unk-Proteo1-b]_DQ203519 [unk-Proteo1-b] MedHO1202C3_env_samples_DQ203519 gi|77547486|gb|DQ203519| Uncultured bacterium clone MedHO1202C3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202C3 predicted proteorhodopsin gene, partial cds DQ203519 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGATTGGCTGATTACAGTCCCGCTTTTGATGATCGAGTTCTGGATTATCTTAAAGGCTGTTGGTTCGTCTGTGGGCAGTGGCTCCTTTATCAGACTCTTAGTCGGCACCTTGGTTATGCTAATTTTCGGCTACCTAGGCGAAGCGGGTGTGATGAACGCGACCTTAGGTTTTTGGCTGGGCATGGTAGGTTGGGCTGTGATCATCTATGAAATCTTTGCAGGGGAAGCGGGCAAAGCAGCTGCCGCAACAGAAAGTGTAAAAGCAGCTTTTGGGTATATGAGGCTGATCGTGTTGGTCGGATGGGCAATCTATCCA RYIDWLITVPLLMIEFWIILKAVGSSVGSGSFIRLLVGTLVMLIFGYLGEAGVMNATLGFWLGMVGWAVIIYEIFAGEAGKAAAATESVKAAFGYMRLIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGATTGG------------------------CTGATTACAGTCCCGCTTTTGATGATCGAGTTCTGGATTATCTTAAAGGCT---------GTTGGTTCGTCTGTGGGCAGT---GGCTCC------------------------------------TTTATCAGA---CTCTTAGTCGGCACCTTGGTTATGCTAATTTTCGGCTACCTAGGCGAA---------GCG------------------GGT------GTG---------------------------------ATG------------------------------------------------------------------AACGCG------------------ACCTTAGGT---TTTTGGCTGGGCATGGTAGGTTGGGCTGTGATCATCTATGAAATC---------------TTT------GCA---GGGGAAGCGGGCAAAGCAGCT------------GCC---GCAACAGAAAGTGTA---AAA---GCA---GCT---TTT---GGG---TATATG---AGGCTGATCGTGTTGGTC---------------------------------------------------------------GGATGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMIEFWIILKA---VGSSVGS-GS------------FIR-LLVGTLVMLIFGYLGE---A------G--V-----------M----------------------NA------TLG-FWLGMVGWAVIIYEI-----F--A-GEAGKAA----A-ATESV-K-A-A-F-G-YM-RLIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ926217 [unk-Proteo1-b] RHOMEO_AG_OTU3_u2 gb|KJ926217| Uncultured bacterium cloneRHOMEO AG OTU3 u2 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU3 u2 putative proteorhodopsin gene, partial cds KJ926217 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGTTGATAACCGTGCCGTTATTGATGATCGAATTCTTCCTGATACTCAAAGCGGTTGGTGCCGCGGTCGGTACAGGTTCATTTTTACGCCTTCTGGTTGGCACTTTGGTCATGCTTATATTCGGCTACCTTGGAGAGGCGGAGTTGATGAACGTCACCCTCGCATTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATTTACGCGGGCGCTGCTGGCAGCGCGGCTAAAGTAGCCTCACCCGCTGTCGCATCAGCATTCAACTATATGAGACTCATTGTGCTTGTA WLITVPLLMIEFFLILKAVGAAVGTGSFLRLLVGTLVMLIFGYLGEAELMNVTLAFWIGMAGWGVIIYEIYAGAAGSAAKVASPAVASAFNYMRLIVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGATAACCGTGCCGTTATTGATGATCGAATTCTTCCTGATACTCAAAGCG---------GTTGGTGCCGCGGTCGGTACA---GGTTCA------------------------------------TTTTTACGC---CTTCTGGTTGGCACTTTGGTCATGCTTATATTCGGCTACCTTGGAGAG---------GCG------------------GAG------TTG---------------------------------ATG------------------------------------------------------------------AACGTC------------------ACCCTCGCA---TTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATT---------------TAC------GCG---GGCGCTGCTGGCAGCGCGGCT---AAA------GTA---GCCTCACCCGCTGTC---GCA---TCA---GCA---TTC---AAC---TATATG---AGACTCATTGTGCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFFLILKA---VGAAVGT-GS------------FLR-LLVGTLVMLIFGYLGE---A------E--L-----------M----------------------NV------TLA-FWIGMAGWGVIIYEI-----Y--A-GAAGSAA-K--V-ASPAV-A-S-A-F-N-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ926219 [unk-Proteo1-b] RHOMEO_AG_OTU3_u4 gb|KJ926219| Uncultured bacterium cloneRHOMEO AG OTU3 u4 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU3 u4 putative proteorhodopsin gene, partial cds KJ926219 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGTTGATAACCGTGCCGTTATTGATGATCGAATTCTTCCTGATACTCAAAGCGGTTGGTGCCGCGGTCGGTACAGGTTCATTTTTACGCCTTCTGGTTGGCACTTTGGTCGTGCTTATATTCGGCTACCTTGGAGAGGCGGAGTTGATGAACGTCACCCTCGCATTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATTTACGCGGGCGCTGCTGGCGGCGCGGCTAAAGTAGCCTCACCCGCTGTCGCATCAGCATTCAACTATATGAGACTCATTGTGCTTGTA WLITVPLLMIEFFLILKAVGAAVGTGSFLRLLVGTLVVLIFGYLGEAELMNVTLAFWIGMAGWGVIIYEIYAGAAGGAAKVASPAVASAFNYMRLIVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGATAACCGTGCCGTTATTGATGATCGAATTCTTCCTGATACTCAAAGCG---------GTTGGTGCCGCGGTCGGTACA---GGTTCA------------------------------------TTTTTACGC---CTTCTGGTTGGCACTTTGGTCGTGCTTATATTCGGCTACCTTGGAGAG---------GCG------------------GAG------TTG---------------------------------ATG------------------------------------------------------------------AACGTC------------------ACCCTCGCA---TTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATT---------------TAC------GCG---GGCGCTGCTGGCGGCGCGGCT------------AAAGTAGCCTCACCCGCTGTC---GCA---TCA---GCA---TTC---AAC---TATATG---AGACTCATTGTGCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFFLILKA---VGAAVGT-GS------------FLR-LLVGTLVVLIFGYLGE---A------E--L-----------M----------------------NV------TLA-FWIGMAGWGVIIYEI-----Y--A-GAAGGAA----KVASPAV-A-S-A-F-N-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ926220 [unk-Proteo1-b] RHOMEO_AG_OTU3_u5 gb|KJ926220| Uncultured bacterium cloneRHOMEO AG OTU3 u5 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU3 u5 putative proteorhodopsin gene, partial cds KJ926220 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGTTGATAACCGTGCCGTTATTGATGATCGAATTCTTCCTGATACTCAAAGCGGTTGGTGCCGCGGTCGGTACAGGTTCATTCTTACGCCTTCTGGTTGGCACCTTGGTCATGCTTATATTCGGCTACCTTGGAGAGGCGGAGTTGATGAACGTCACCCTCGCATTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATTTACGCGGGCGCTGCTGGCAGCGCGGCTAAAGTAGCCTCACCCGCTGTCGCATCAGCATTCAACTATATGAGACTCATTGTGCTTGTA WLITVPLLMIEFFLILKAVGAAVGTGSFLRLLVGTLVMLIFGYLGEAELMNVTLAFWIGMAGWGVIIYEIYAGAAGSAAKVASPAVASAFNYMRLIVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGATAACCGTGCCGTTATTGATGATCGAATTCTTCCTGATACTCAAAGCG---------GTTGGTGCCGCGGTCGGTACA---GGTTCA------------------------------------TTCTTACGC---CTTCTGGTTGGCACCTTGGTCATGCTTATATTCGGCTACCTTGGAGAG---------GCG------------------GAG------TTG---------------------------------ATG------------------------------------------------------------------AACGTC------------------ACCCTCGCA---TTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATT---------------TAC------GCG---GGCGCTGCTGGCAGCGCGGCT---AAA------GTA---GCCTCACCCGCTGTC---GCA---TCA---GCA---TTC---AAC---TATATG---AGACTCATTGTGCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFFLILKA---VGAAVGT-GS------------FLR-LLVGTLVMLIFGYLGE---A------E--L-----------M----------------------NV------TLA-FWIGMAGWGVIIYEI-----Y--A-GAAGSAA-K--V-ASPAV-A-S-A-F-N-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ926216 [unk-Proteo1-b] RHOMEO_AG_OTU3 gb|KJ926216| Uncultured bacterium cloneRHOMEO AG OTU3 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU3 putative proteorhodopsin gene, partial cds KJ926216 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGTTGATAACCGTGCCGTTATTGATGATCGAATTCTTCCTGATACTCAAAGCGGTTGGTGCCGCGGTAGGTACAGGTTCATTCTTACGACTTCTGGTTGGCACCTTGGTCATGCTTATTTTCGGCTACCTTGGAGAGGCGGAGTTGATGAACGTCACCCTCGCATTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATCTACGCGGGCGATGCTGGCAGTGCGGCTAAAGTAGCCTCACCCGCTGTCGCATCAGCATTCAACTATATGAGACTCATTGTGCTTGTA WLITVPLLMIEFFLILKAVGAAVGTGSFLRLLVGTLVMLIFGYLGEAELMNVTLAFWIGMAGWGVIIYEIYAGDAGSAAKVASPAVASAFNYMRLIVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGATAACCGTGCCGTTATTGATGATCGAATTCTTCCTGATACTCAAAGCG---------GTTGGTGCCGCGGTAGGTACA---GGTTCA------------------------------------TTCTTACGA---CTTCTGGTTGGCACCTTGGTCATGCTTATTTTCGGCTACCTTGGAGAG---------GCG------------------GAG------TTG---------------------------------ATG------------------------------------------------------------------AACGTC------------------ACCCTCGCA---TTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATC---------------TAC------GCG---GGCGATGCTGGCAGTGCGGCT---AAA------GTA---GCCTCACCCGCTGTC---GCA---TCA---GCA---TTC---AAC---TATATG---AGACTCATTGTGCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFFLILKA---VGAAVGT-GS------------FLR-LLVGTLVMLIFGYLGE---A------E--L-----------M----------------------NV------TLA-FWIGMAGWGVIIYEI-----Y--A-GDAGSAA-K--V-ASPAV-A-S-A-F-N-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ926221 [unk-Proteo1-b] RHOMEO_AG_OTU3_u6 gb|KJ926221| Uncultured bacterium cloneRHOMEO AG OTU3 u6 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU3 u6 putative proteorhodopsin gene, partial cds KJ926221 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGTTAATAACCGTACCGTTATTAATGATCGAATTCTTCCTGATACTCAAAGCGGTTGGTGCCGCGGTAGGTACAGGTTCATTCTTACGTCTTCTGGTTGGCACGTTGGTCATGCTTATTTTCGGCTACCTTGGAGAGGCGGAGTTGATGAACGTCACCCTCGCATTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATTTTTGCGGGCGCTGCCGGCAGCGCGGCTAAAGTTGCCTCACCAGCTGTGGCGTCAGCATTCAACTACATGAGACTCATTGTGCTTGTA WLITVPLLMIEFFLILKAVGAAVGTGSFLRLLVGTLVMLIFGYLGEAELMNVTLAFWIGMAGWGVIIYEIFAGAAGSAAKVASPAVASAFNYMRLIVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATAACCGTACCGTTATTAATGATCGAATTCTTCCTGATACTCAAAGCG---------GTTGGTGCCGCGGTAGGTACA---GGTTCA------------------------------------TTCTTACGT---CTTCTGGTTGGCACGTTGGTCATGCTTATTTTCGGCTACCTTGGAGAG---------GCG------------------GAG------TTG---------------------------------ATG------------------------------------------------------------------AACGTC------------------ACCCTCGCA---TTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATT---------------TTT------GCG---GGCGCTGCCGGCAGCGCGGCT---AAA------GTT---GCCTCACCAGCTGTG---GCG---TCA---GCA---TTC---AAC---TACATG---AGACTCATTGTGCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFFLILKA---VGAAVGT-GS------------FLR-LLVGTLVMLIFGYLGE---A------E--L-----------M----------------------NV------TLA-FWIGMAGWGVIIYEI-----F--A-GAAGSAA-K--V-ASPAV-A-S-A-F-N-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ926222 [unk-Proteo1-b] RHOMEO_AG_OTU3_u7 gb|KJ926222| Uncultured bacterium cloneRHOMEO AG OTU3 u7 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU3 u7 putative proteorhodopsin gene, partial cds KJ926222 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGTTAATAACCGTACCGTTATTAATGATCGAATTCTTCCTGATACTCAAAGCGGTTGGTGCCGCGGTAGGTACAGGTTCATTCTTACGTCTTTTGGTTGGCACGTTGGTCATGCTTATTTTCGGCTACCTTGGAGAGGCGGAGTTGATGAACGTCACCCTCGCATTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATTTTTGCGGGCGCTGCTGGCAGCGCGGCTAAAGTTGCCTCACCAGCTGTGGCGTCAGCATTCAACTACATGAGACTCATTGTGCTTGTA WLITVPLLMIEFFLILKAVGAAVGTGSFLRLLVGTLVMLIFGYLGEAELMNVTLAFWIGMAGWGVIIYEIFAGAAGSAAKVASPAVASAFNYMRLIVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATAACCGTACCGTTATTAATGATCGAATTCTTCCTGATACTCAAAGCG---------GTTGGTGCCGCGGTAGGTACA---GGTTCA------------------------------------TTCTTACGT---CTTTTGGTTGGCACGTTGGTCATGCTTATTTTCGGCTACCTTGGAGAG---------GCG------------------GAG------TTG---------------------------------ATG------------------------------------------------------------------AACGTC------------------ACCCTCGCA---TTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATT---------------TTT------GCG---GGCGCTGCTGGCAGCGCGGCT---AAA------GTT---GCCTCACCAGCTGTG---GCG---TCA---GCA---TTC---AAC---TACATG---AGACTCATTGTGCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFFLILKA---VGAAVGT-GS------------FLR-LLVGTLVMLIFGYLGE---A------E--L-----------M----------------------NV------TLA-FWIGMAGWGVIIYEI-----F--A-GAAGSAA-K--V-ASPAV-A-S-A-F-N-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ926218 [unk-Proteo1-b] RHOMEO_AG_OTU3_u3 gb|KJ926218| Uncultured bacterium cloneRHOMEO AG OTU3 u3 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU3 u3 putative proteorhodopsin gene, partial cds KJ926218 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGTTAATAACCGTACCGTTATTAATGATCGAATTCTTCCTGATACTCAAAGCGGTTGGTGCCGCGGTAGGTACAGGTTCATTCTTACGTCTTTTGGTTGGCACGTTGGTCATGCTTATTTTCGGCTACCTTGGAGAGGCGGAGTTGATGAGCGTCACCCTCGCATTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATTTTTGCGGGCGCTGCTGGCAGCGCGGCTAAAGTTGCCTCACCAGCTGTGGCGTCAGCATTCAACTACATGAGACTCATTGTGCTTGTA WLITVPLLMIEFFLILKAVGAAVGTGSFLRLLVGTLVMLIFGYLGEAELMSVTLAFWIGMAGWGVIIYEIFAGAAGSAAKVASPAVASAFNYMRLIVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATAACCGTACCGTTATTAATGATCGAATTCTTCCTGATACTCAAAGCG---------GTTGGTGCCGCGGTAGGTACA---GGTTCA------------------------------------TTCTTACGT---CTTTTGGTTGGCACGTTGGTCATGCTTATTTTCGGCTACCTTGGAGAG---------GCG------------------GAG------TTG---------------------------------ATG------------------------------------------------------------------AGCGTC------------------ACCCTCGCA---TTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATT---------------TTT------GCG---GGCGCTGCTGGCAGCGCGGCT---AAA------GTT---GCCTCACCAGCTGTG---GCG---TCA---GCA---TTC---AAC---TACATG---AGACTCATTGTGCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFFLILKA---VGAAVGT-GS------------FLR-LLVGTLVMLIFGYLGE---A------E--L-----------M----------------------SV------TLA-FWIGMAGWGVIIYEI-----F--A-GAAGSAA-K--V-ASPAV-A-S-A-F-N-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ926197 [unk-Proteo1-b] RHOMEO_AG_OTU17 gb|KJ926197| Uncultured bacterium cloneRHOMEO AG OTU17 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU17 putative proteorhodopsin gene, partial cds KJ926197 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGTTAATCACTGTGCCACTGTTGATGATCGAGTTTTACATTATTCCAAAAGCCGTTGGTGCTTCGGTGGGTAGCGGATCTTTTGTTCGACTTCTGGTTGGAACCTTGGTGATGTTGGTGTTCGGTTACTTAGGCGAAGCGGGCATCATGGGCACAACCCTCGCGTTTATCCTCGGAATGGTCGGTTGGGCAGTTATTATCTACGAAATCTTCGCAGGTGAGGCTGGTAAGGCAGCCGCTGCAAATGAGAGTGTTAAGGCTGCGTTTGGCTACATGCGATTAATCGTTCTTGTA WLITVPLLMIEFYIIPKAVGASVGSGSFVRLLVGTLVMLVFGYLGEAGIMGTTLAFILGMVGWAVIIYEIFAGEAGKAAAANESVKAAFGYMRLIVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATCACTGTGCCACTGTTGATGATCGAGTTTTACATTATTCCAAAAGCC---------GTTGGTGCTTCGGTGGGTAGC---GGATCT------------------------------------TTTGTTCGA---CTTCTGGTTGGAACCTTGGTGATGTTGGTGTTCGGTTACTTAGGCGAA---------GCG------------------GGC------ATC---------------------------------ATG------------------------------------------------------------------GGCACA------------------ACCCTCGCG---TTTATCCTCGGAATGGTCGGTTGGGCAGTTATTATCTACGAAATC---------------TTC------GCA---GGTGAGGCTGGTAAGGCAGCC------------GCT---GCAAATGAGAGTGTT---AAG---GCT---GCG---TTT---GGC---TACATG---CGATTAATCGTTCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFYIIPKA---VGASVGS-GS------------FVR-LLVGTLVMLVFGYLGE---A------G--I-----------M----------------------GT------TLA-FILGMVGWAVIIYEI-----F--A-GEAGKAA----A-ANESV-K-A-A-F-G-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_DQ203569 [unk-Proteo1-b] MedHO1202G9_env_samples_DQ203569 gi|77547586|gb|DQ203569| Uncultured bacterium clone MedHO1202G9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202G9 predicted proteorhodopsin gene, partial cds DQ203569 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTACATTGACTGGCTCATCACCGTGCCGCTTCAAATGATTGAGTTCTGGTTGATTTTGGCGGCGGTTGGAGCTGCGGTAGGCGCGGGGTCTTTCTTGCGACTACTTATTGGCACCTTGGTTATGCTGGTCTTCGGGTTTATGGGAGAGGCTGGATACATGGACTCAACCATAGCCTTCGTTATAGCGATGATAGGTTGGGCTATTATCATCTATGAAATCTTTGCAGGAGAAGCGAGCAAGGCTGCTGGCTCATCAAATGCATCGGTTCAAGGCGCGTTCAGTGCAATGAGACTTATCGTTCTTGTTGGTTGGGCAATATATCCA RYIDWLITVPLQMIEFWLILAAVGAAVGAGSFLRLLIGTLVMLVFGFMGEAGYMDSTIAFVIAMIGWAIIIYEIFAGEASKAAGSSNASVQGAFSAMRLIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATTGACTGG------------------------CTCATCACCGTGCCGCTTCAAATGATTGAGTTCTGGTTGATTTTGGCGGCG---------GTTGGAGCTGCGGTAGGCGCG---GGGTCT------------------------------------TTCTTGCGA---CTACTTATTGGCACCTTGGTTATGCTGGTCTTCGGGTTTATGGGAGAG---------GCT------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------GACTCA------------------ACCATAGCC---TTCGTTATAGCGATGATAGGTTGGGCTATTATCATCTATGAAATC---------------TTT------GCA---GGAGAAGCGAGCAAGGCT---GCTGGC------TCA---TCAAATGCATCGGTT---CAA---GGC---GCG---TTC---AGT---GCAATG---AGACTTATCGTTCTTGTT---------------------------------------------------------------GGTTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFWLILAA---VGAAVGA-GS------------FLR-LLIGTLVMLVFGFMGE---A------G--Y-----------M----------------------DS------TIA-FVIAMIGWAIIIYEI-----F--A-GEASKA-AG--S-SNASV-Q-G-A-F-S-AM-RLIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_DQ203799 [unk-Proteo1-b] SS114a40A5_env_samples_DQ203799 gi|77548046|gb|DQ203799| Uncultured bacterium clone SS114a40A5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40A5 predicted proteorhodopsin gene, partial cds DQ203799 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGATTGGCTCATCACCGTGCCGCTTCAAATGATTGAGTTCTGGTTGATTTTGGCGGCGGTTGGAGCTGCGGTAGGCGCGGGGTCTTTCTTGCGACTACTTATTGGCACCTTGGTTATGCTGGTCTTCGGGTTTATGGGAGAGGCTGGATACATGGACTCAACCATAGCCTTCGTTATAGCGATGATAGGTTGGGCTATTATCATCTATGAAATCTTTGCAGGAGAAGCGAGCAAGGCTGCTGGCTCATCAAATGCATCGGTTCAAGGCGCGTTCAGTGCAATGAGACTTATCGTTCTTGTTGGTTGGGCAATATATCCA RYIDWLITVPLQMIEFWLILAAVGAAVGAGSFLRLLIGTLVMLVFGFMGEAGYMDSTIAFVIAMIGWAIIIYEIFAGEASKAAGSSNASVQGAFSAMRLIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGATTGG------------------------CTCATCACCGTGCCGCTTCAAATGATTGAGTTCTGGTTGATTTTGGCGGCG---------GTTGGAGCTGCGGTAGGCGCG---GGGTCT------------------------------------TTCTTGCGA---CTACTTATTGGCACCTTGGTTATGCTGGTCTTCGGGTTTATGGGAGAG---------GCT------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------GACTCA------------------ACCATAGCC---TTCGTTATAGCGATGATAGGTTGGGCTATTATCATCTATGAAATC---------------TTT------GCA---GGAGAAGCGAGCAAGGCT---GCTGGC------TCA---TCAAATGCATCGGTT---CAA---GGC---GCG---TTC---AGT---GCAATG---AGACTTATCGTTCTTGTT---------------------------------------------------------------GGTTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFWLILAA---VGAAVGA-GS------------FLR-LLIGTLVMLVFGFMGE---A------G--Y-----------M----------------------DS------TIA-FVIAMIGWAIIIYEI-----F--A-GEASKA-AG--S-SNASV-Q-G-A-F-S-AM-RLIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_DQ203620 [unk-Proteo1-b] medHO120D8_env_samples_DQ203620 gi|77547688|gb|DQ203620| Uncultured bacterium clone medHO120D8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120D8 predicted proteorhodopsin gene, partial cds DQ203620 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGCTACATTGATTGGCTCATCACCGTGCCGCTTCAAATGATTGAGTTCTGGTTGATTTTGGCGGCGGTTGGAGCTGCGGTAGGCGCGGGGTCTTTCTTGCGACTACTTATTGGCACCTTGGTTATGCTGGTCTTCGGGTTTATGGGAGAGGCTGGATACATGGACTCAACCATAGCCTTCGTTATAGCGATGATAGGTTGGGCTATTATCATCTATGAAATCTTTGCAGGAGAAGCGAGCAAGGCTGCTGGCTCATCAAATGCATCGGTTCAAGGCGCGTTCAGTGCAATGAGACTTATCGTTCTTGTTGGTTGGGCAATATATCCA RYIDWLITVPLQMIEFWLILAAVGAAVGAGSFLRLLIGTLVMLVFGFMGEAGYMDSTIAFVIAMIGWAIIIYEIFAGEASKAAGSSNASVQGAFSAMRLIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTACATTGATTGG------------------------CTCATCACCGTGCCGCTTCAAATGATTGAGTTCTGGTTGATTTTGGCGGCG---------GTTGGAGCTGCGGTAGGCGCG---GGGTCT------------------------------------TTCTTGCGA---CTACTTATTGGCACCTTGGTTATGCTGGTCTTCGGGTTTATGGGAGAG---------GCT------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------GACTCA------------------ACCATAGCC---TTCGTTATAGCGATGATAGGTTGGGCTATTATCATCTATGAAATC---------------TTT------GCA---GGAGAAGCGAGCAAGGCT---GCTGGC------TCA---TCAAATGCATCGGTT---CAA---GGC---GCG---TTC---AGT---GCAATG---AGACTTATCGTTCTTGTT---------------------------------------------------------------GGTTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFWLILAA---VGAAVGA-GS------------FLR-LLIGTLVMLVFGFMGE---A------G--Y-----------M----------------------DS------TIA-FVIAMIGWAIIIYEI-----F--A-GEASKA-AG--S-SNASV-Q-G-A-F-S-AM-RLIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_DQ203389 [unk-Proteo1-b] MedHO102E12_env_samples_DQ203389 gi|77547226|gb|DQ203389| Uncultured bacterium clone MedHO102E12 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102E12 predicted proteorhodopsin gene, partial cds DQ203389 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTCATCACCGTGCCGCTTCAAATGATTGAGTTCTGGTTGATTTTGGCGGCGGTTGGAGCTGCGGTAGGCGCGGGGTCTTTCTTGCGACTACTTATTGGCACCTTGGTTATGCTGGTCTTCGGGTTTATGGGAGAGGCTGGATACATGGACTCAACCATAGCCTTCGTTATAGCGATGATAGGTTGGGCTATTATCATCTATGAAATCTTTGCAGGAGAAGCGAGCAAGGCTGCTGGCTCATCAAATGCATCGGTTCAAGGCGCGTTCAGTGCAATGAGACTTATCGTTCTTGTTGGTTGGGCAATTTATCCA RYIDWLITVPLQMIEFWLILAAVGAAVGAGSFLRLLIGTLVMLVFGFMGEAGYMDSTIAFVIAMIGWAIIIYEIFAGEASKAAGSSNASVQGAFSAMRLIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTCATCACCGTGCCGCTTCAAATGATTGAGTTCTGGTTGATTTTGGCGGCG---------GTTGGAGCTGCGGTAGGCGCG---GGGTCT------------------------------------TTCTTGCGA---CTACTTATTGGCACCTTGGTTATGCTGGTCTTCGGGTTTATGGGAGAG---------GCT------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------GACTCA------------------ACCATAGCC---TTCGTTATAGCGATGATAGGTTGGGCTATTATCATCTATGAAATC---------------TTT------GCA---GGAGAAGCGAGCAAGGCT---GCTGGC------TCA---TCAAATGCATCGGTT---CAA---GGC---GCG---TTC---AGT---GCAATG---AGACTTATCGTTCTTGTT---------------------------------------------------------------GGTTGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFWLILAA---VGAAVGA-GS------------FLR-LLIGTLVMLVFGFMGE---A------G--Y-----------M----------------------DS------TIA-FVIAMIGWAIIIYEI-----F--A-GEASKA-AG--S-SNASV-Q-G-A-F-S-AM-RLIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_DQ203613 [unk-Proteo1-b] medHO120D11_env_samples_DQ203613 gi|77547674|gb|DQ203613| Uncultured bacterium clone medHO120D11 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120D11 predicted proteorhodopsin gene, partial cds DQ203613 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTCATCACCGTGCCGCTTCAAATGATTGAGTTCTGGTTGATTTTGGCGGCGGTTGGAGCTGCGGTAGGCGCGGGGTCTTTCTTGCGACTACTTATTGGCACCTTGGTTATGCTGGTCTTCGGGTTTATGGGAGAGGCTGGATACATGGACTCAACCATAGCCTTCGTTATAGCGATGATAGGTTGGGCTATTATCATCTATGAAATCTTTGCAGGAGAAGCGAGCAAGGCTGCTGGCTCATCAAATGCATCGGTTCAAGGCGCGTTCAGTGCAATGAGACTTATCGTTCTTGTTGGTTGGGCAATTTACCCA RYIDWLITVPLQMIEFWLILAAVGAAVGAGSFLRLLIGTLVMLVFGFMGEAGYMDSTIAFVIAMIGWAIIIYEIFAGEASKAAGSSNASVQGAFSAMRLIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTCATCACCGTGCCGCTTCAAATGATTGAGTTCTGGTTGATTTTGGCGGCG---------GTTGGAGCTGCGGTAGGCGCG---GGGTCT------------------------------------TTCTTGCGA---CTACTTATTGGCACCTTGGTTATGCTGGTCTTCGGGTTTATGGGAGAG---------GCT------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------GACTCA------------------ACCATAGCC---TTCGTTATAGCGATGATAGGTTGGGCTATTATCATCTATGAAATC---------------TTT------GCA---GGAGAAGCGAGCAAGGCT---GCTGGC------TCA---TCAAATGCATCGGTT---CAA---GGC---GCG---TTC---AGT---GCAATG---AGACTTATCGTTCTTGTT---------------------------------------------------------------GGTTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFWLILAA---VGAAVGA-GS------------FLR-LLIGTLVMLVFGFMGE---A------G--Y-----------M----------------------DS------TIA-FVIAMIGWAIIIYEI-----F--A-GEASKA-AG--S-SNASV-Q-G-A-F-S-AM-RLIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_DQ203798 [unk-Proteo1-b] SS114a40A4_env_samples_DQ203798 gi|77548044|gb|DQ203798| Uncultured bacterium clone SS114a40A4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40A4 predicted proteorhodopsin gene, partial cds DQ203798 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTCATCACCGTGCCGCTTCAAATGGTTGAGTTCTGGTTGATTTTGGCGGCGGTTGGAGCTGCGGTAGGCGCGGGGTCTTTCTTGCGACTACTTATTGGCACCTTGGTTATGCTGGTCTTCGGGTTTATGGGAGAGGCTGGATACATGGACTCAACCATAGCCTTCGTTATAGCGATGATAGGTTGGGCTATTATCATCTATGAAATCTTTGCAGGAGAAGCGAGCAAGGCTGCTGGCTCATCAAATGCATCGGTTCAAGGCGCGTCCAGTGCAATGAGACTTATCGTTCTTGTTGGGTGGGCCATTTATCCA RYIDWLITVPLQMVEFWLILAAVGAAVGAGSFLRLLIGTLVMLVFGFMGEAGYMDSTIAFVIAMIGWAIIIYEIFAGEASKAAGSSNASVQGASSAMRLIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTCATCACCGTGCCGCTTCAAATGGTTGAGTTCTGGTTGATTTTGGCGGCG---------GTTGGAGCTGCGGTAGGCGCG---GGGTCT------------------------------------TTCTTGCGA---CTACTTATTGGCACCTTGGTTATGCTGGTCTTCGGGTTTATGGGAGAG---------GCT------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------GACTCA------------------ACCATAGCC---TTCGTTATAGCGATGATAGGTTGGGCTATTATCATCTATGAAATC---------------TTT------GCA---GGAGAAGCGAGCAAGGCT---GCTGGC------TCA---TCAAATGCATCGGTT---CAA---GGC---GCG---TCC---AGT---GCAATG---AGACTTATCGTTCTTGTT---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFWLILAA---VGAAVGA-GS------------FLR-LLIGTLVMLVFGFMGE---A------G--Y-----------M----------------------DS------TIA-FVIAMIGWAIIIYEI-----F--A-GEASKA-AG--S-SNASV-Q-G-A-S-S-AM-RLIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_DQ203491 [unk-Proteo1-b] MedHO1202A1_env_samples_DQ203491 gi|77547430|gb|DQ203491| Uncultured bacterium clone MedHO1202A1 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202A1 predicted proteorhodopsin gene, partial cds DQ203491 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATACATTGATTGGCTCATCACCGTGCCGCTTCAAATGATTGAGTTCTGGTTGATTTTGGCGGCGGTTGGAGCTGCGGTAGGCGCGGGGTCTTTCTTGCGACTACTTATTGGCACCTTGGTTATGCTGGTCTTCGGGTTTATGGGAGAGGCTGGATACATGGACTCAACCATAGCCTTCGTTATAGCGATGATAGGTTGGGCTATTATCATCTATGAAATCTTTGCAGGAGAAGCGAGCAAGGCTGCTGGCTCATCAAATGCATCGGTTCAAGGCGCGTTCAGTGCAATGAGACTTATCGTTCTTGTTGGCTGGGCCATATATCCA RYIDWLITVPLQMIEFWLILAAVGAAVGAGSFLRLLIGTLVMLVFGFMGEAGYMDSTIAFVIAMIGWAIIIYEIFAGEASKAAGSSNASVQGAFSAMRLIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATTGATTGG------------------------CTCATCACCGTGCCGCTTCAAATGATTGAGTTCTGGTTGATTTTGGCGGCG---------GTTGGAGCTGCGGTAGGCGCG---GGGTCT------------------------------------TTCTTGCGA---CTACTTATTGGCACCTTGGTTATGCTGGTCTTCGGGTTTATGGGAGAG---------GCT------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------GACTCA------------------ACCATAGCC---TTCGTTATAGCGATGATAGGTTGGGCTATTATCATCTATGAAATC---------------TTT------GCA---GGAGAAGCGAGCAAGGCT---GCTGGC------TCA---TCAAATGCATCGGTT---CAA---GGC---GCG---TTC---AGT---GCAATG---AGACTTATCGTTCTTGTT---------------------------------------------------------------GGCTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFWLILAA---VGAAVGA-GS------------FLR-LLIGTLVMLVFGFMGE---A------G--Y-----------M----------------------DS------TIA-FVIAMIGWAIIIYEI-----F--A-GEASKA-AG--S-SNASV-Q-G-A-F-S-AM-RLIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_DQ203779 [unk-Proteo1-b] SS114a0F7_env_samples_DQ203779 gi|77548006|gb|DQ203779| Uncultured bacterium clone SS114a0F7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0F7 predicted proteorhodopsin gene, partial cds DQ203779 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATACATTGATTGGCTCATCACCGTGCCGCTTCAAATGATTGAGTTCTGGTTGATTTTGGCGGCGGTTGGAGCTGCGGTAGGCGCGGGGTCTTTCTTGCGACTACTTATTGGCACCTTGGTTATGCTGGTCTTCGGGTTTATGGGAGAGGCTGGATACATGGACTCAACCATAGCCTTCGTTATAGCGATGATAGGTTGGGCTATTATCATCTATGAAATCTTTGCAGGAGAAGCGAGCAAGGCTGCTGGCTCATCAAATGCATCGGTTCAAGGCGCGTTCAGTGCAATGAGACTTATCGTTCTTGTTGGTTGGGCCATTTATCCA RYIDWLITVPLQMIEFWLILAAVGAAVGAGSFLRLLIGTLVMLVFGFMGEAGYMDSTIAFVIAMIGWAIIIYEIFAGEASKAAGSSNASVQGAFSAMRLIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATTGATTGG------------------------CTCATCACCGTGCCGCTTCAAATGATTGAGTTCTGGTTGATTTTGGCGGCG---------GTTGGAGCTGCGGTAGGCGCG---GGGTCT------------------------------------TTCTTGCGA---CTACTTATTGGCACCTTGGTTATGCTGGTCTTCGGGTTTATGGGAGAG---------GCT------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------GACTCA------------------ACCATAGCC---TTCGTTATAGCGATGATAGGTTGGGCTATTATCATCTATGAAATC---------------TTT------GCA---GGAGAAGCGAGCAAGGCT---GCTGGC------TCA---TCAAATGCATCGGTT---CAA---GGC---GCG---TTC---AGT---GCAATG---AGACTTATCGTTCTTGTT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFWLILAA---VGAAVGA-GS------------FLR-LLIGTLVMLVFGFMGE---A------G--Y-----------M----------------------DS------TIA-FVIAMIGWAIIIYEI-----F--A-GEASKA-AG--S-SNASV-Q-G-A-F-S-AM-RLIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_DQ203842 [unk-Proteo1-b] SS114a40G5_env_samples_DQ203842 gi|77548132|gb|DQ203842| Uncultured bacterium clone SS114a40G5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40G5 predicted proteorhodopsin gene, partial cds DQ203842 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTCATCACCGTGCCGCTTCAAATGATTGAGTTCTGGTTGATTTTGGCGGCGGTTGGAGCTGCGGTAGGCGCGGGGTCTTTCTTGCGACTACTTATTGGCACCTTGGTTATGCTGGTCTTCGGGTTTATGGGAGAGGCTGGATACATGGACTCAACCATAGCCTTCGTTATAGCGATGATAGGTTGGGCTATTATCATCTATGAAATCTTTGCAGGAGAAGCGAGCAAGGCTGCTGGCTCATCAAATGCATCGGTTCAAGGCGCGTTCAGTGCAATGAGACTTATCGTTCTTGTTGGTTGGGCCATTTATCCA RYIDWLITVPLQMIEFWLILAAVGAAVGAGSFLRLLIGTLVMLVFGFMGEAGYMDSTIAFVIAMIGWAIIIYEIFAGEASKAAGSSNASVQGAFSAMRLIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTCATCACCGTGCCGCTTCAAATGATTGAGTTCTGGTTGATTTTGGCGGCG---------GTTGGAGCTGCGGTAGGCGCG---GGGTCT------------------------------------TTCTTGCGA---CTACTTATTGGCACCTTGGTTATGCTGGTCTTCGGGTTTATGGGAGAG---------GCT------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------GACTCA------------------ACCATAGCC---TTCGTTATAGCGATGATAGGTTGGGCTATTATCATCTATGAAATC---------------TTT------GCA---GGAGAAGCGAGCAAGGCT---GCTGGC------TCA---TCAAATGCATCGGTT---CAA---GGC---GCG---TTC---AGT---GCAATG---AGACTTATCGTTCTTGTT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFWLILAA---VGAAVGA-GS------------FLR-LLIGTLVMLVFGFMGE---A------G--Y-----------M----------------------DS------TIA-FVIAMIGWAIIIYEI-----F--A-GEASKA-AG--S-SNASV-Q-G-A-F-S-AM-RLIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_DQ203644 [unk-Proteo1-b] medHO120G12_env_samples_DQ203644 gi|77547736|gb|DQ203644| Uncultured bacterium clone medHO120G12 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120G12 predicted proteorhodopsin gene, partial cds DQ203644 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGATTGGCTCATCACCGTGCCGCTTCAAATGATTGAGTTCTGGTTGATTTTGGCGGCGGTTGGAGCTGCGGTAGGCGCGGGGTCTTTCTTGCGACTACTTATTGGCACCTTGGTTATGCTGGTCTTCGGGTTTATGGGAGAGGCTGGATACATGGACTCAACCATAGCCTTCGTTATAGCGATGATAGGTTGGGCTATTATCATCTATGAAATCTTTGCAGGAGAAGCGAGCAAGGCTGCTGGCTCATCAAATGCATCGGTTCAAGGCGCGTTCAGTGCAATGAGACTTATCGTTCTTGTTGGTTGGGCCATCTATCCA SYIDWLITVPLQMIEFWLILAAVGAAVGAGSFLRLLIGTLVMLVFGFMGEAGYMDSTIAFVIAMIGWAIIIYEIFAGEASKAAGSSNASVQGAFSAMRLIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGATTGG------------------------CTCATCACCGTGCCGCTTCAAATGATTGAGTTCTGGTTGATTTTGGCGGCG---------GTTGGAGCTGCGGTAGGCGCG---GGGTCT------------------------------------TTCTTGCGA---CTACTTATTGGCACCTTGGTTATGCTGGTCTTCGGGTTTATGGGAGAG---------GCT------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------GACTCA------------------ACCATAGCC---TTCGTTATAGCGATGATAGGTTGGGCTATTATCATCTATGAAATC---------------TTT------GCA---GGAGAAGCGAGCAAGGCT---GCTGGC------TCA---TCAAATGCATCGGTT---CAA---GGC---GCG---TTC---AGT---GCAATG---AGACTTATCGTTCTTGTT---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQMIEFWLILAA---VGAAVGA-GS------------FLR-LLIGTLVMLVFGFMGE---A------G--Y-----------M----------------------DS------TIA-FVIAMIGWAIIIYEI-----F--A-GEASKA-AG--S-SNASV-Q-G-A-F-S-AM-RLIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_DQ203672 [unk-Proteo1-b] medHO155B11_env_samples_DQ203672 gi|77547792|gb|DQ203672| Uncultured bacterium clone medHO155B11 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155B11 predicted proteorhodopsin gene, partial cds DQ203672 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGATTGGCTCATCACCGTGCCGCTTCAAATGATTGAGTTCTGGTTGATTTTGGCGGCGGTTGGAGCTGCGGTAGGCGCGGGGTCTTTCTTGCGACTACTTATTGGCACCTTGGTTATGCTGGTCTTCGGGTTTATGGGAGAGGCTGGATACATGGACTCAACCATAGCCTTCGTTATAGCGATGATAGGTTGGGCTATTATCATCTATGAAATCTTTGCAGGAGAAGCGAGCAAGGCTGCTGGCTCATCAAATGCATCGGTTCAAGGCGCGTTCAGTGCAATGAGACTTATCGTTCTTGTTGGTTGGGCCATCTACCCA SYIDWLITVPLQMIEFWLILAAVGAAVGAGSFLRLLIGTLVMLVFGFMGEAGYMDSTIAFVIAMIGWAIIIYEIFAGEASKAAGSSNASVQGAFSAMRLIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGATTGG------------------------CTCATCACCGTGCCGCTTCAAATGATTGAGTTCTGGTTGATTTTGGCGGCG---------GTTGGAGCTGCGGTAGGCGCG---GGGTCT------------------------------------TTCTTGCGA---CTACTTATTGGCACCTTGGTTATGCTGGTCTTCGGGTTTATGGGAGAG---------GCT------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------GACTCA------------------ACCATAGCC---TTCGTTATAGCGATGATAGGTTGGGCTATTATCATCTATGAAATC---------------TTT------GCA---GGAGAAGCGAGCAAGGCT---GCTGGC------TCA---TCAAATGCATCGGTT---CAA---GGC---GCG---TTC---AGT---GCAATG---AGACTTATCGTTCTTGTT---------------------------------------------------------------GGTTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQMIEFWLILAA---VGAAVGA-GS------------FLR-LLIGTLVMLVFGFMGE---A------G--Y-----------M----------------------DS------TIA-FVIAMIGWAIIIYEI-----F--A-GEASKA-AG--S-SNASV-Q-G-A-F-S-AM-RLIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_DQ203828 [unk-Proteo1-b] SS114a40E6_env_samples_DQ203828 gi|77548104|gb|DQ203828| Uncultured bacterium clone SS114a40E6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40E6 predicted proteorhodopsin gene, partial cds DQ203828 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATAGATTGGCTCATCACCGTGCCGCTTCAAATGATTGAGTTCTGGTTGATTTTAGCGGCAGTTGGAGCTGCGGTAGGCGCGGGGTCTTTCTTGCGACTACTTATTGGCACCTTGGTTATGCTGGTCTTCGGGTTTATGGGAGAGGCCGGATACATGGACTCAACCATAGCCTTCGTTATAGCGATGATAGGTTGGGCTATTATCATCTATGAAATCTTTGCAGGAGAGGCGAGCAAGGCTGCTGGCTCATCAAATGCATCAGTTCAAGGCGCGTTCAGTGCGATGAGACTTATCGTTCTTGTTGGGTGGGCCATCTATCCA SYIDWLITVPLQMIEFWLILAAVGAAVGAGSFLRLLIGTLVMLVFGFMGEAGYMDSTIAFVIAMIGWAIIIYEIFAGEASKAAGSSNASVQGAFSAMRLIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATAGATTGG------------------------CTCATCACCGTGCCGCTTCAAATGATTGAGTTCTGGTTGATTTTAGCGGCA---------GTTGGAGCTGCGGTAGGCGCG---GGGTCT------------------------------------TTCTTGCGA---CTACTTATTGGCACCTTGGTTATGCTGGTCTTCGGGTTTATGGGAGAG---------GCC------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------GACTCA------------------ACCATAGCC---TTCGTTATAGCGATGATAGGTTGGGCTATTATCATCTATGAAATC---------------TTT------GCA---GGAGAGGCGAGCAAGGCT---GCTGGC------TCA---TCAAATGCATCAGTT---CAA---GGC---GCG---TTC---AGT---GCGATG---AGACTTATCGTTCTTGTT---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQMIEFWLILAA---VGAAVGA-GS------------FLR-LLIGTLVMLVFGFMGE---A------G--Y-----------M----------------------DS------TIA-FVIAMIGWAIIIYEI-----F--A-GEASKA-AG--S-SNASV-Q-G-A-F-S-AM-RLIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_DQ203298 [unk-Proteo1-b] Ss114a802_env_samples_DQ203298 gi|77547044|gb|DQ203298| Uncultured bacterium clone Ss114a802 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone Ss114a802 predicted proteorhodopsin gene, partial cds DQ203298 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_80m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_2003 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGATTGGCTCATCACCGTGCCGCTTCAAATGATTGAGTTCTGGTTGATTTTGGCGGCGGTTGGAGCTGCGGTAGGCGCGGGGTCTTTCTTGCGACTACTTATTGGCACCTTGGTTATGCTGGTCTTCGGGTTTATGGGAGAGGCTGGATACATGGACTCAACCATAGCCTTCGTTATAGCGATGATAGGTTGGGCTATTATCATCTATGAAATCTTTGCAGGAGAAGCGAGCAAGGCTGCTGGCTCATCAAATGCATCGGTTCAAGGCGCGTTCAGTGCAATGAGACTTATCGTTCTTGTTGGTTGGGCCATCTATCCA SYIDWLITVPLQMIEFWLILAAVGAAVGAGSFLRLLIGTLVMLVFGFMGEAGYMDSTIAFVIAMIGWAIIIYEIFAGEASKAAGSSNASVQGAFSAMRLIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGATTGG------------------------CTCATCACCGTGCCGCTTCAAATGATTGAGTTCTGGTTGATTTTGGCGGCG---------GTTGGAGCTGCGGTAGGCGCG---GGGTCT------------------------------------TTCTTGCGA---CTACTTATTGGCACCTTGGTTATGCTGGTCTTCGGGTTTATGGGAGAG---------GCT------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------GACTCA------------------ACCATAGCC---TTCGTTATAGCGATGATAGGTTGGGCTATTATCATCTATGAAATC---------------TTT------GCA---GGAGAAGCGAGCAAGGCT---GCTGGC------TCA---TCAAATGCATCGGTT---CAA---GGC---GCG---TTC---AGT---GCAATG---AGACTTATCGTTCTTGTT---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQMIEFWLILAA---VGAAVGA-GS------------FLR-LLIGTLVMLVFGFMGE---A------G--Y-----------M----------------------DS------TIA-FVIAMIGWAIIIYEI-----F--A-GEASKA-AG--S-SNASV-Q-G-A-F-S-AM-RLIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_DQ203719 [unk-Proteo1-b] medHO155G1_env_samples_DQ203719 gi|77547886|gb|DQ203719| Uncultured bacterium clone medHO155G1 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155G1 predicted proteorhodopsin gene, partial cds DQ203719 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGATTGGCTCATCACCGTGCCGCTTCAAATGATTGAGTTCTGGTTGATTTTGGCGGCGGTTGGAGCTGCGGTAGGCGCGGGGTCTTTCTTGCGACTACTTATTGGCACCTTGGTTATGCTGGTCTTCGGGTTTATGGGAGAGGCTGGATACATGGACTCAACCATAGCCTTCGTTATAGCGATGATAGGTTGGGCTATTATCATCTATGAAATCTTTGCAGGAGAAGCGAGCAAGGCTGCTGGCTCATCAAATGCATCGGTTCAAGGCGCGTTCAGTGCAATGAGACTTATCGTTCTTGTTGGTTGGGCCATATATCCA SYIDWLITVPLQMIEFWLILAAVGAAVGAGSFLRLLIGTLVMLVFGFMGEAGYMDSTIAFVIAMIGWAIIIYEIFAGEASKAAGSSNASVQGAFSAMRLIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGATTGG------------------------CTCATCACCGTGCCGCTTCAAATGATTGAGTTCTGGTTGATTTTGGCGGCG---------GTTGGAGCTGCGGTAGGCGCG---GGGTCT------------------------------------TTCTTGCGA---CTACTTATTGGCACCTTGGTTATGCTGGTCTTCGGGTTTATGGGAGAG---------GCT------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------GACTCA------------------ACCATAGCC---TTCGTTATAGCGATGATAGGTTGGGCTATTATCATCTATGAAATC---------------TTT------GCA---GGAGAAGCGAGCAAGGCT---GCTGGC------TCA---TCAAATGCATCGGTT---CAA---GGC---GCG---TTC---AGT---GCAATG---AGACTTATCGTTCTTGTT---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQMIEFWLILAA---VGAAVGA-GS------------FLR-LLIGTLVMLVFGFMGE---A------G--Y-----------M----------------------DS------TIA-FVIAMIGWAIIIYEI-----F--A-GEASKA-AG--S-SNASV-Q-G-A-F-S-AM-RLIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_DQ203702 [unk-Proteo1-b] medHO155E10_env_samples_DQ203702 gi|77547852|gb|DQ203702| Uncultured bacterium clone medHO155E10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155E10 predicted proteorhodopsin gene, partial cds DQ203702 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATACATTGATTGGCTCATCACCGTGCCGCTTCAAATGATTGAGTTCTGGTTGATTTTGGCGGCGGTTGGAGCTGCGGTAGGCGCGGGGTCTTTCTTGCGACTACTTATTGGCACCTTGGTTATGCTGGTCTTCGGGTTTATGGGAGAGGCTGGATACATGGACTCAACCATAGCCTTCGTTATAGCGATGATAGGTTGGGCTATTATCATCTATGAAATCTTTGCAGGAGAAGCGAGCAAGGCTGCTGGCTCATCAAATGCATCGGTTCAAGGCGCGTTCAGTGCAATGAGACTTATCGTTCTTGTTGGGTGGGCCATCTATCCA RYIDWLITVPLQMIEFWLILAAVGAAVGAGSFLRLLIGTLVMLVFGFMGEAGYMDSTIAFVIAMIGWAIIIYEIFAGEASKAAGSSNASVQGAFSAMRLIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATTGATTGG------------------------CTCATCACCGTGCCGCTTCAAATGATTGAGTTCTGGTTGATTTTGGCGGCG---------GTTGGAGCTGCGGTAGGCGCG---GGGTCT------------------------------------TTCTTGCGA---CTACTTATTGGCACCTTGGTTATGCTGGTCTTCGGGTTTATGGGAGAG---------GCT------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------GACTCA------------------ACCATAGCC---TTCGTTATAGCGATGATAGGTTGGGCTATTATCATCTATGAAATC---------------TTT------GCA---GGAGAAGCGAGCAAGGCT---GCTGGC------TCA---TCAAATGCATCGGTT---CAA---GGC---GCG---TTC---AGT---GCAATG---AGACTTATCGTTCTTGTT---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFWLILAA---VGAAVGA-GS------------FLR-LLIGTLVMLVFGFMGE---A------G--Y-----------M----------------------DS------TIA-FVIAMIGWAIIIYEI-----F--A-GEASKA-AG--S-SNASV-Q-G-A-F-S-AM-RLIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_DQ203826 [unk-Proteo1-b] SS114a40E2_env_samples_DQ203826 gi|77548100|gb|DQ203826| Uncultured bacterium clone SS114a40E2 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40E2 predicted proteorhodopsin gene, partial cds DQ203826 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTCATCACCGTGCCGCTTCAAATGATTGAGTTCTGGTTGATTTTGGCGGCGGTTGGAGCTGCGGTAGGCGCGGGGTCTTTCTTGCGACTACTTATTGGCACCTTGGTTATGCTGGTCTTCGGGTTTATGGGAGAGGCTGGATACATGGACTCAACCATAGCCTTCGTTATAGCGATGATAGGTTGGGCTATTATCATCTATGAAATCTTTGCAGGAGAAGCGAGCAAGGCTGCTGGCTCATCAAATGCATCGGTTCAAGGCGCGTTCAGTGCAATGAGACTTATCGTTCTTGTTGGTTGGGCAATATACCCA RYIDWLITVPLQMIEFWLILAAVGAAVGAGSFLRLLIGTLVMLVFGFMGEAGYMDSTIAFVIAMIGWAIIIYEIFAGEASKAAGSSNASVQGAFSAMRLIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTCATCACCGTGCCGCTTCAAATGATTGAGTTCTGGTTGATTTTGGCGGCG---------GTTGGAGCTGCGGTAGGCGCG---GGGTCT------------------------------------TTCTTGCGA---CTACTTATTGGCACCTTGGTTATGCTGGTCTTCGGGTTTATGGGAGAG---------GCT------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------GACTCA------------------ACCATAGCC---TTCGTTATAGCGATGATAGGTTGGGCTATTATCATCTATGAAATC---------------TTT------GCA---GGAGAAGCGAGCAAGGCT---GCTGGC------TCA---TCAAATGCATCGGTT---CAA---GGC---GCG---TTC---AGT---GCAATG---AGACTTATCGTTCTTGTT---------------------------------------------------------------GGTTGG---------GCAATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFWLILAA---VGAAVGA-GS------------FLR-LLIGTLVMLVFGFMGE---A------G--Y-----------M----------------------DS------TIA-FVIAMIGWAIIIYEI-----F--A-GEASKA-AG--S-SNASV-Q-G-A-F-S-AM-RLIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_DQ203317 [unk-Proteo1-b] SS114a80D11_env_samples_DQ203317 gi|77547082|gb|DQ203317| Uncultured bacterium clone SS114a80D11 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a80D11 predicted proteorhodopsin gene, partial cds DQ203317 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_80m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_2003 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATAGATTGGCTCATCACCGTGCCGCTTCAAATGATTGAGTTCTGGTTGATTTTGGCGGCGGTTGGAGCTGCGGTAGGCGCGGGGTCTTTCTTGCGACTACTTATTGGCACCTTGGTTATGCTGGTCTTCGGGTTTATGGGAGAGGCTGGATACATGGACTCAACCATAGCCTTCGTTATAGCGATGATAGGTTGGGCTATTATCATCTATGAAATCTTTGCAGGAGAAGCGAGCAAGGCTGCTGGCTCATCAAATGCATCGGTTCAAGGCGCGTTCAGTGCAATGAGACTTATCGTTCTTGTTGGTTGGGCCATCTACCCA RYIDWLITVPLQMIEFWLILAAVGAAVGAGSFLRLLIGTLVMLVFGFMGEAGYMDSTIAFVIAMIGWAIIIYEIFAGEASKAAGSSNASVQGAFSAMRLIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGATTGG------------------------CTCATCACCGTGCCGCTTCAAATGATTGAGTTCTGGTTGATTTTGGCGGCG---------GTTGGAGCTGCGGTAGGCGCG---GGGTCT------------------------------------TTCTTGCGA---CTACTTATTGGCACCTTGGTTATGCTGGTCTTCGGGTTTATGGGAGAG---------GCT------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------GACTCA------------------ACCATAGCC---TTCGTTATAGCGATGATAGGTTGGGCTATTATCATCTATGAAATC---------------TTT------GCA---GGAGAAGCGAGCAAGGCT---GCTGGC------TCA---TCAAATGCATCGGTT---CAA---GGC---GCG---TTC---AGT---GCAATG---AGACTTATCGTTCTTGTT---------------------------------------------------------------GGTTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFWLILAA---VGAAVGA-GS------------FLR-LLIGTLVMLVFGFMGE---A------G--Y-----------M----------------------DS------TIA-FVIAMIGWAIIIYEI-----F--A-GEASKA-AG--S-SNASV-Q-G-A-F-S-AM-RLIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_DQ203666 [unk-Proteo1-b] medHO155A4_env_samples_DQ203666 gi|77547780|gb|DQ203666| Uncultured bacterium clone medHO155A4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155A4 predicted proteorhodopsin gene, partial cds DQ203666 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTAATTACCGTACCTCTTCAAATGATCGAGTTCTGGTTGATTTTAGCAGCTGTGGGAGCAGCGGTAGGATCAGCATCTTTCTTGCGACTGCTTATCGGCACCTTGGTCATGCTTGTCTTCGGATTTATGGGAGAGGCAGGATATATGGATGCAACTATAGCATTCGTTATCGCGATGCTAGGTTGGGCTATTATCATCTATGAAATCTTCGCAGGAGAGGCAAGCAAAGCTGCTGGCTCATCAAACGAATCGGTTCAGGGTGCATTCAGTGCAATGAGGCTTATTGTCCTCGTTGGTTGGGCCATCTATCCA RYIDWLITVPLQMIEFWLILAAVGAAVGSASFLRLLIGTLVMLVFGFMGEAGYMDATIAFVIAMLGWAIIIYEIFAGEASKAAGSSNESVQGAFSAMRLIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACCGTACCTCTTCAAATGATCGAGTTCTGGTTGATTTTAGCAGCT---------GTGGGAGCAGCGGTAGGATCA---GCATCT------------------------------------TTCTTGCGA---CTGCTTATCGGCACCTTGGTCATGCTTGTCTTCGGATTTATGGGAGAG---------GCA------------------GGA------TAT---------------------------------ATG------------------------------------------------------------------GATGCA------------------ACTATAGCA---TTCGTTATCGCGATGCTAGGTTGGGCTATTATCATCTATGAAATC---------------TTC------GCA---GGAGAGGCAAGCAAAGCT---GCTGGC------TCA---TCAAACGAATCGGTT---CAG---GGT---GCA---TTC---AGT---GCAATG---AGGCTTATTGTCCTCGTT---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFWLILAA---VGAAVGS-AS------------FLR-LLIGTLVMLVFGFMGE---A------G--Y-----------M----------------------DA------TIA-FVIAMLGWAIIIYEI-----F--A-GEASKA-AG--S-SNESV-Q-G-A-F-S-AM-RLIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_DQ203712 [unk-Proteo1-b] medHO155F3_env_samples_DQ203712 gi|77547872|gb|DQ203712| Uncultured bacterium clone medHO155F3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155F3 predicted proteorhodopsin gene, partial cds DQ203712 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGATTGGCTAATTACTGTACCTCTTCAAATGATCGAGTTCTGGTTGATTTTAGCAGCTGTTGGAGCAGCGGTAGGCTCATCATCTTTCTTGCGACTACTTGTCGGTACCTTGGTTATGCTGGTCTTCGGATTTATGGGAGAAGCAGAATACATGGATGCGACGATAGCATTTGTTATCGCGATGTTAGGTTGGGCTATTATCATCTACGAAATCTTTGCAGGAGAAGCAAGCAAAGCTGCTGGCTCATCAAATGCATCAGTTCAAGGTGCATTCAGTGCAATGAGGCTTATTGTCTTAGTTGGTTGGGCCATCTACCCA SYIDWLITVPLQMIEFWLILAAVGAAVGSSSFLRLLVGTLVMLVFGFMGEAEYMDATIAFVIAMLGWAIIIYEIFAGEASKAAGSSNASVQGAFSAMRLIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGATTGG------------------------CTAATTACTGTACCTCTTCAAATGATCGAGTTCTGGTTGATTTTAGCAGCT---------GTTGGAGCAGCGGTAGGCTCA---TCATCT------------------------------------TTCTTGCGA---CTACTTGTCGGTACCTTGGTTATGCTGGTCTTCGGATTTATGGGAGAA---------GCA------------------GAA------TAC---------------------------------ATG------------------------------------------------------------------GATGCG------------------ACGATAGCA---TTTGTTATCGCGATGTTAGGTTGGGCTATTATCATCTACGAAATC---------------TTT------GCA---GGAGAAGCAAGCAAAGCT---GCTGGC------TCA---TCAAATGCATCAGTT---CAA---GGT---GCA---TTC---AGT---GCAATG---AGGCTTATTGTCTTAGTT---------------------------------------------------------------GGTTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQMIEFWLILAA---VGAAVGS-SS------------FLR-LLVGTLVMLVFGFMGE---A------E--Y-----------M----------------------DA------TIA-FVIAMLGWAIIIYEI-----F--A-GEASKA-AG--S-SNASV-Q-G-A-F-S-AM-RLIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_DQ339208 [unk-Proteo1-b] clone_S-SOM-E2_DQ339208 gi|85681393|gb|DQ339208| Uncultured bacterium clone S-SOM-E2 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-E2 predicted proteorhodopsin gene, partial cds. DQ339208 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATTACTGTACCTCTGCAAATGATCGAGTTTTGGTTGATTCTAGCGGCTGTTGGAGCAGCGGTAGGCGGGGCATCATTCTTGCGTCTTCTTGTTGGTACCTTAGTTATGCTGGTCTTCGGATATTTGGGAGAGGCAGGTTACATGGATGCAACTATAGCCTTTGTTATTGCGATGATCGGATGGGCTATTGTCATCTACGAAATCTTTGCGGGAGAGGCGAGCAAAGCTGCTGGCTCATCAAACGCCTCTGTTCAAGGCGCGTTCAGTGCGATGAGACTTATTGTTTTAGTAGGTTGGGCCATTTATCCA RYIDWLITVPLQMIEFWLILAAVGAAVGGASFLRLLVGTLVMLVFGYLGEAGYMDATIAFVIAMIGWAIVIYEIFAGEASKAAGSSNASVQGAFSAMRLIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTACCTCTGCAAATGATCGAGTTTTGGTTGATTCTAGCGGCT---------GTTGGAGCAGCGGTAGGCGGG---GCATCA------------------------------------TTCTTGCGT---CTTCTTGTTGGTACCTTAGTTATGCTGGTCTTCGGATATTTGGGAGAG---------GCA------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GATGCA------------------ACTATAGCC---TTTGTTATTGCGATGATCGGATGGGCTATTGTCATCTACGAAATC---------------TTT------GCG---GGAGAGGCGAGCAAAGCT---GCTGGC------TCA---TCAAACGCCTCTGTT---CAA---GGC---GCG---TTC---AGT---GCGATG---AGACTTATTGTTTTAGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFWLILAA---VGAAVGG-AS------------FLR-LLVGTLVMLVFGYLGE---A------G--Y-----------M----------------------DA------TIA-FVIAMIGWAIVIYEI-----F--A-GEASKA-AG--S-SNASV-Q-G-A-F-S-AM-RLIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_DQ203323 [unk-Proteo1-b] SS114a80E12_env_samples_DQ203323 gi|77547094|gb|DQ203323| Uncultured bacterium clone SS114a80E12 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a80E12 predicted proteorhodopsin gene, partial cds DQ203323 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_80m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_2003 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGCTATATTGATTGGCTCATCACCGTGCCACTTCAAATGATTGAATTCTGGTTAATCCTAGCGGCAGTTGGCGCAGCAGTAGGCTCAGGATCTTTCTTGCGACTACTCGTTGGCACCTTGGTCATGCTGGTCTTCGGATTCATGGGAGAAGCCGGATACATGGATTCAACCATAGCCTTCGTCATCGCGATGGTAGGTTGGGCTATAATCATTTACGAGATTTTTGCAGGAGAAGCAAGCAAAGCTGCTGGCTCATCGAATGCATCAGTTCAGGGTGCGTTCAGCGCAATGAGACTTATCGTTCTGGTTGGTTGGGCCATCTATCCA RYIDWLITVPLQMIEFWLILAAVGAAVGSGSFLRLLVGTLVMLVFGFMGEAGYMDSTIAFVIAMVGWAIIIYEIFAGEASKAAGSSNASVQGAFSAMRLIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTATATTGATTGG------------------------CTCATCACCGTGCCACTTCAAATGATTGAATTCTGGTTAATCCTAGCGGCA---------GTTGGCGCAGCAGTAGGCTCA---GGATCT------------------------------------TTCTTGCGA---CTACTCGTTGGCACCTTGGTCATGCTGGTCTTCGGATTCATGGGAGAA---------GCC------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------GATTCA------------------ACCATAGCC---TTCGTCATCGCGATGGTAGGTTGGGCTATAATCATTTACGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAAGCT---GCTGGC------TCA---TCGAATGCATCAGTT---CAG---GGT---GCG---TTC---AGC---GCAATG---AGACTTATCGTTCTGGTT---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMIEFWLILAA---VGAAVGS-GS------------FLR-LLVGTLVMLVFGFMGE---A------G--Y-----------M----------------------DS------TIA-FVIAMVGWAIIIYEI-----F--A-GEASKA-AG--S-SNASV-Q-G-A-F-S-AM-RLIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ926239 [unk-Proteo1-b] RHOMEO_AG_OTU9_u2 gb|KJ926239| Uncultured bacterium cloneRHOMEO AG OTU9 u2 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU9 u2 putative proteorhodopsin gene, partial cds KJ926239 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGTTGATTACAGTCCCACTACTTATGATTGAGTTTTTCATCATACTTCGTGCCGCAGGGTCAGCGGTAGGCAATGGATCTTTCGTTCGCTTGCTTTTTGGCACGCTTATTATGCTTGTCTTCGGATACATGGGCGAAGCTAAGCTCATGAATCAGGCGTTCGCTTTTGGCCTGGGGATGGTCGGCTGGGCTGTTATTATTTACGAAATCTACGCAGGCGCAGCAGGAACCGCGGCTAAAGAGGCCGGTGCTGCGGTGCAAAGCGCCTTTAGCGCAATGCGCTGGATTGTGTTGGTC WLITVPLLMIEFFIILRAAGSAVGNGSFVRLLFGTLIMLVFGYMGEAKLMNQAFAFGLGMVGWAVIIYEIYAGAAGTAAKEAGAAVQSAFSAMRWIVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGATTACAGTCCCACTACTTATGATTGAGTTTTTCATCATACTTCGTGCC---------GCAGGGTCAGCGGTAGGCAAT---GGATCT------------------------------------TTCGTTCGC---TTGCTTTTTGGCACGCTTATTATGCTTGTCTTCGGATACATGGGCGAA---------GCT------------------AAG------CTC---------------------------------ATG------------------------------------------------------------------AATCAG------------------GCGTTCGCT---TTTGGCCTGGGGATGGTCGGCTGGGCTGTTATTATTTACGAAATC---------------TAC------GCA---GGCGCAGCAGGAACCGCG---GCTAAA------GAG---GCCGGTGCTGCGGTG---CAA---AGC---GCC---TTT---AGC---GCAATG---CGCTGGATTGTGTTGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFFIILRA---AGSAVGN-GS------------FVR-LLFGTLIMLVFGYMGE---A------K--L-----------M----------------------NQ------AFA-FGLGMVGWAVIIYEI-----Y--A-GAAGTA-AK--E-AGAAV-Q-S-A-F-S-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ926242 [unk-Proteo1-b] RHOMEO_AG_OTU9_u5 gb|KJ926242| Uncultured bacterium cloneRHOMEO AG OTU9 u5 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU9 u5 putative proteorhodopsin gene, partial cds KJ926242 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGTTGATTACAGTCCCACTACTGATGATTGAGTTTTTCATCATACTTCGTGCCGCAGGGTCAGCGGTAGGCAATGGATCTTTCGTTCGCTTGCTTTTTGGCACGCTTATTATGCTTGTCTTCGGATACATGGGCGAAGCTAAGCTCATGAATCAGGCGTTCGCTTTTGGCCTGGGGATGGTCGGCTGGGCTGTTATTATTTACGAAATCTACGCAGGCGCAGCAGGAACCGCGGCTAAAGAGGCCGGTGCTGCGGTGCAAAGCGCCTTTAGCGCAATGCGCTGGATTGTGTTGGTC WLITVPLLMIEFFIILRAAGSAVGNGSFVRLLFGTLIMLVFGYMGEAKLMNQAFAFGLGMVGWAVIIYEIYAGAAGTAAKEAGAAVQSAFSAMRWIVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGATTACAGTCCCACTACTGATGATTGAGTTTTTCATCATACTTCGTGCC---------GCAGGGTCAGCGGTAGGCAAT---GGATCT------------------------------------TTCGTTCGC---TTGCTTTTTGGCACGCTTATTATGCTTGTCTTCGGATACATGGGCGAA---------GCT------------------AAG------CTC---------------------------------ATG------------------------------------------------------------------AATCAG------------------GCGTTCGCT---TTTGGCCTGGGGATGGTCGGCTGGGCTGTTATTATTTACGAAATC---------------TAC------GCA---GGCGCAGCAGGAACCGCG---GCTAAA------GAG---GCCGGTGCTGCGGTG---CAA---AGC---GCC---TTT---AGC---GCAATG---CGCTGGATTGTGTTGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFFIILRA---AGSAVGN-GS------------FVR-LLFGTLIMLVFGYMGE---A------K--L-----------M----------------------NQ------AFA-FGLGMVGWAVIIYEI-----Y--A-GAAGTA-AK--E-AGAAV-Q-S-A-F-S-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ926240 [unk-Proteo1-b] RHOMEO_AG_OTU9_u3 gb|KJ926240| Uncultured bacterium cloneRHOMEO AG OTU9 u3 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU9 u3 putative proteorhodopsin gene, partial cds KJ926240 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGTTGATTACAGTCCCACTACTGATGATTGAGTTTTTCATCATACTTCGTGCCGCAGGGTCAGCGGTAGGCAATGGATCTTTCGTTCGCTTGCTTTTTGGCACGCTTATTATGCTTGTCTTCGGATACATGGGCGAAGCTAAGCTCATGAATCAGGCGTTCGCTTTTGGCCTGGGGATGGTCGGCTGGGCTGTTATTATTTACGAAATCTACGCAGGCGCAGCAGGAACCGCGGCTAAAGAGGCCGGTGCTGCGGTGCAAAGCGCCTTTAGCGCAATGCGCTGGATTGTGTTGGTC WLITVPLLMIEFFIILRAAGSAVGNGSFVRLLFGTLIMLVFGYMGEAKLMNQAFAFGLGMVGWAVIIYEIYAGAAGTAAKEAGAAVQSAFSAMRWIVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGATTACAGTCCCACTACTGATGATTGAGTTTTTCATCATACTTCGTGCC---------GCAGGGTCAGCGGTAGGCAAT---GGATCT------------------------------------TTCGTTCGC---TTGCTTTTTGGCACGCTTATTATGCTTGTCTTCGGATACATGGGCGAA---------GCT------------------AAG------CTC---------------------------------ATG------------------------------------------------------------------AATCAG------------------GCGTTCGCT---TTTGGCCTGGGGATGGTCGGCTGGGCTGTTATTATTTACGAAATC---------------TAC------GCA---GGCGCAGCAGGAACCGCG---GCTAAA------GAG---GCCGGTGCTGCGGTG---CAA---AGC---GCC---TTT---AGC---GCAATG---CGCTGGATTGTGTTGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFFIILRA---AGSAVGN-GS------------FVR-LLFGTLIMLVFGYMGE---A------K--L-----------M----------------------NQ------AFA-FGLGMVGWAVIIYEI-----Y--A-GAAGTA-AK--E-AGAAV-Q-S-A-F-S-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ926241 [unk-Proteo1-b] RHOMEO_AG_OTU9_u4 gb|KJ926241| Uncultured bacterium cloneRHOMEO AG OTU9 u4 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU9 u4 putative proteorhodopsin gene, partial cds KJ926241 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGTTGATTACAGTCCCACTACTGATGATTGAGTTTTTCATCATACTTCGTGCCGCAGGGTCAGCGGTAGGCAATGGATCTTTCGTTCGCTTGCTTTTTGGCACGCTTATTATGCTTGTCTTCGGATACATGGGCGAAGCTAAGCTCATGAATCAGGCGTTCGCTTTTGGCCTGGGGATGGTCGGCTGGGCTGTTATTATTTACGAAATCTACGCAGGCGCAGCAGGAACCGCGGCTAAAGAGGCCGGTGCTGCGGTGCAAAGCGCCTTTAGCGCAATGCGCTGGATTGTGTTGGTC WLITVPLLMIEFFIILRAAGSAVGNGSFVRLLFGTLIMLVFGYMGEAKLMNQAFAFGLGMVGWAVIIYEIYAGAAGTAAKEAGAAVQSAFSAMRWIVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGATTACAGTCCCACTACTGATGATTGAGTTTTTCATCATACTTCGTGCC---------GCAGGGTCAGCGGTAGGCAAT---GGATCT------------------------------------TTCGTTCGC---TTGCTTTTTGGCACGCTTATTATGCTTGTCTTCGGATACATGGGCGAA---------GCT------------------AAG------CTC---------------------------------ATG------------------------------------------------------------------AATCAG------------------GCGTTCGCT---TTTGGCCTGGGGATGGTCGGCTGGGCTGTTATTATTTACGAAATC---------------TAC------GCA---GGCGCAGCAGGAACCGCG---GCTAAA------GAG---GCCGGTGCTGCGGTG---CAA---AGC---GCC---TTT---AGC---GCAATG---CGCTGGATTGTGTTGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFFIILRA---AGSAVGN-GS------------FVR-LLFGTLIMLVFGYMGE---A------K--L-----------M----------------------NQ------AFA-FGLGMVGWAVIIYEI-----Y--A-GAAGTA-AK--E-AGAAV-Q-S-A-F-S-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ926238 [unk-Proteo1-b] RHOMEO_AG_OTU9 gb|KJ926238| Uncultured bacterium cloneRHOMEO AG OTU9 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU9 putative proteorhodopsin gene, partial cds KJ926238 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGTTGATTACAGTCCCACTACTGATGATTGAGTTTTTCATCATACCTCGTGCCGCAGGGTCAGCGGTAGGCAATGGATCTTTCGTTCGCTTGCTTTTTGGCACGCTTATTATGCTTGTCTTCGGATACATGGGCGAAGCTAAGCTCATGAATCAGGCGTTCGCTTTTGGCCTGGGGATGGTCGGCTGGGCTGTTATTATTTACGAAATCTACGCAGGCGCAGCAGGAACCGCGGCTAAAGAGGCCGGTGCTGCGGTGCAAAGCGCCTTTAGCGCAATGCGCTGGACTGTGTTGGTC WLITVPLLMIEFFIIPRAAGSAVGNGSFVRLLFGTLIMLVFGYMGEAKLMNQAFAFGLGMVGWAVIIYEIYAGAAGTAAKEAGAAVQSAFSAMRWTVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGATTACAGTCCCACTACTGATGATTGAGTTTTTCATCATACCTCGTGCC---------GCAGGGTCAGCGGTAGGCAAT---GGATCT------------------------------------TTCGTTCGC---TTGCTTTTTGGCACGCTTATTATGCTTGTCTTCGGATACATGGGCGAA---------GCT------------------AAG------CTC---------------------------------ATG------------------------------------------------------------------AATCAG------------------GCGTTCGCT---TTTGGCCTGGGGATGGTCGGCTGGGCTGTTATTATTTACGAAATC---------------TAC------GCA---GGCGCAGCAGGAACCGCG---GCTAAA------GAG---GCCGGTGCTGCGGTG---CAA---AGC---GCC---TTT---AGC---GCAATG---CGCTGGACTGTGTTGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFFIIPRA---AGSAVGN-GS------------FVR-LLFGTLIMLVFGYMGE---A------K--L-----------M----------------------NQ------AFA-FGLGMVGWAVIIYEI-----Y--A-GAAGTA-AK--E-AGAAV-Q-S-A-F-S-AM-RWTVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ926243 [unk-Proteo1-b] RHOMEO_AG_OTU9_u6 gb|KJ926243| Uncultured bacterium cloneRHOMEO AG OTU9 u6 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU9 u6 putative proteorhodopsin gene, partial cds KJ926243 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGTTGATTACAGTCCCACTACTGATGATTGAGTTTTTCCTCATACTTCGTGCCGCAGGGTCAGCGGTAGGCAATGGATCTTTCGTTCGCTTGCTTTTTGGCACGCTTATTATGCTTGTCTTCGGATACATGGGCGAAGCTAAGCTCATGAATCAGGCGTTCGCTTTTGGCCTGGGGATGGTCGGCTGGGCTGTTATTATTTACGAAATCTACGCAGGCGCAGCAGGAACCGCGGCTAAAGAGGCCGGTGCTGCGGTGCAAAGCGCCTTTAGCGCAATGCGCTGGATTGTGTTGGTC WLITVPLLMIEFFLILRAAGSAVGNGSFVRLLFGTLIMLVFGYMGEAKLMNQAFAFGLGMVGWAVIIYEIYAGAAGTAAKEAGAAVQSAFSAMRWIVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGATTACAGTCCCACTACTGATGATTGAGTTTTTCCTCATACTTCGTGCC---------GCAGGGTCAGCGGTAGGCAAT---GGATCT------------------------------------TTCGTTCGC---TTGCTTTTTGGCACGCTTATTATGCTTGTCTTCGGATACATGGGCGAA---------GCT------------------AAG------CTC---------------------------------ATG------------------------------------------------------------------AATCAG------------------GCGTTCGCT---TTTGGCCTGGGGATGGTCGGCTGGGCTGTTATTATTTACGAAATC---------------TAC------GCA---GGCGCAGCAGGAACCGCG---GCTAAA------GAG---GCCGGTGCTGCGGTG---CAA---AGC---GCC---TTT---AGC---GCAATG---CGCTGGATTGTGTTGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFFLILRA---AGSAVGN-GS------------FVR-LLFGTLIMLVFGYMGE---A------K--L-----------M----------------------NQ------AFA-FGLGMVGWAVIIYEI-----Y--A-GAAGTA-AK--E-AGAAV-Q-S-A-F-S-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_JX863176 [unk-Proteo1-b] MALINA_OTU14_161_L_env_samples_JX863176 gi|425477302|gb|JX863176| Uncultured bacterium clone MALINA OTU14 161 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU14 161 L putative proteorhodopsin gene, partial cds JX863176 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 11Aug2009 80m_depth Arctic Ocean marine 70.68 -139.62 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGATCACAGTGCCACTACTGATGATTGAGTTTTTCATCATACTTCGCGCCGCAGGTTCAGCGGTAGGCAATGGATCGTTCGTTCGATTGCTTTTTGGCACGCTCATCATGCTTGTGTTCGGATACATGGGCGAAGCTGAGCTCATGAATCAAGCGCTCGCGTTTGGCCTTGGGATGGTCGGTTGGGCGGATATTATCTACGAAATCTATGCAGGTGCAGCAGGAACCGCGGCGAAAGAGGCCGGGGCGGCGGTGCAAAGCGCCTTTAGCGCAATGCGCTGGATTGTATTGGTC WLITVPLLMIEFFIILRAAGSAVGNGSFVRLLFGTLIMLVFGYMGEAELMNQALAFGLGMVGWADIIYEIYAGAAGTAAKEAGAAVQSAFSAMRWIVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGATCACAGTGCCACTACTGATGATTGAGTTTTTCATCATACTTCGCGCC---------GCAGGTTCAGCGGTAGGCAAT---GGATCG------------------------------------TTCGTTCGA---TTGCTTTTTGGCACGCTCATCATGCTTGTGTTCGGATACATGGGCGAA---------GCT------------------GAG------CTC---------------------------------ATG------------------------------------------------------------------AATCAA------------------GCGCTCGCG---TTTGGCCTTGGGATGGTCGGTTGGGCGGATATTATCTACGAAATC---------------TAT------GCA---GGTGCAGCAGGAACCGCG---GCGAAA------GAG---GCCGGGGCGGCGGTG---CAA---AGC---GCC---TTT---AGC---GCAATG---CGCTGGATTGTATTGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFFIILRA---AGSAVGN-GS------------FVR-LLFGTLIMLVFGYMGE---A------E--L-----------M----------------------NQ------ALA-FGLGMVGWADIIYEI-----Y--A-GAAGTA-AK--E-AGAAV-Q-S-A-F-S-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_JX863177 [unk-Proteo1-b] MALINA_OTU14_181_L_env_samples_JX863177 gi|425477304|gb|JX863177| Uncultured bacterium clone MALINA OTU14 181 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU14 181 L putative proteorhodopsin gene, partial cds JX863177 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 11Aug2009 80m_depth Arctic Ocean marine 70.68 -139.62 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGATCACAGTGCCACTACTGATGATTGAGTTTTTCATCATACTTCGCGCCGCAGGTTCAGCGGTAGGCAATGGATCGTTCGTTCGATTGCTTTTTGGCACGCTCATCATGCTTGTGTTCGGATACATGGGCGAAGCTGAGCTCATGAATCAAGCGCTCGCGTTTGGCCTTGGGATGGTCGGTTGGGCGGTTATTATCTACGAAATCTATGCAGGTGCAGCAGGAACCGCGGCGAAAGAGGCCGGGGCGGCGGTGCAAAGCGCCTTTAGCGCAATGCGCTGGATTGTATTGGTC WLITVPLLMIEFFIILRAAGSAVGNGSFVRLLFGTLIMLVFGYMGEAELMNQALAFGLGMVGWAVIIYEIYAGAAGTAAKEAGAAVQSAFSAMRWIVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGATCACAGTGCCACTACTGATGATTGAGTTTTTCATCATACTTCGCGCC---------GCAGGTTCAGCGGTAGGCAAT---GGATCG------------------------------------TTCGTTCGA---TTGCTTTTTGGCACGCTCATCATGCTTGTGTTCGGATACATGGGCGAA---------GCT------------------GAG------CTC---------------------------------ATG------------------------------------------------------------------AATCAA------------------GCGCTCGCG---TTTGGCCTTGGGATGGTCGGTTGGGCGGTTATTATCTACGAAATC---------------TAT------GCA---GGTGCAGCAGGAACCGCG---GCGAAA------GAG---GCCGGGGCGGCGGTG---CAA---AGC---GCC---TTT---AGC---GCAATG---CGCTGGATTGTATTGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFFIILRA---AGSAVGN-GS------------FVR-LLFGTLIMLVFGYMGE---A------E--L-----------M----------------------NQ------ALA-FGLGMVGWAVIIYEI-----Y--A-GAAGTA-AK--E-AGAAV-Q-S-A-F-S-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_JX863175 [unk-Proteo1-b] MALINA_OTU14_096_L_env_samples_JX863175 gi|425477300|gb|JX863175| Uncultured bacterium clone MALINA OTU14 096 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU14 096 L putative proteorhodopsin gene, partial cds JX863175 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 08Aug2009 70m_depth Arctic Ocean marine 70.8 -133.73 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGATCACAGTGCCACTACTGATGATTGAGTTTTTCATCATACTTCGCGCCGCAGGTTCAGCGGTAGGCAATGGATCGTTCGTTCGATTGCTTTTTGGCACGCTCATCATGCTTGTGTTCGGATACGTGGGCGAAGCTGAGCTCATGAATCAAGCGCTCGCGTTTGGCCTTGGGATGGTCGGTTGGGCGGTTATTATCTACGAAATCTATGCAGGTGCAGCAGGAACCGCGGCGAAAGAGGCCGGGGCGGCGGTGCAAAGCGCCTTTAGCGCAATGCGCTGGATTGTATTGGTC WLITVPLLMIEFFIILRAAGSAVGNGSFVRLLFGTLIMLVFGYVGEAELMNQALAFGLGMVGWAVIIYEIYAGAAGTAAKEAGAAVQSAFSAMRWIVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGATCACAGTGCCACTACTGATGATTGAGTTTTTCATCATACTTCGCGCC---------GCAGGTTCAGCGGTAGGCAAT---GGATCG------------------------------------TTCGTTCGA---TTGCTTTTTGGCACGCTCATCATGCTTGTGTTCGGATACGTGGGCGAA---------GCT------------------GAG------CTC---------------------------------ATG------------------------------------------------------------------AATCAA------------------GCGCTCGCG---TTTGGCCTTGGGATGGTCGGTTGGGCGGTTATTATCTACGAAATC---------------TAT------GCA---GGTGCAGCAGGAACCGCG---GCGAAA------GAG---GCCGGGGCGGCGGTG---CAA---AGC---GCC---TTT---AGC---GCAATG---CGCTGGATTGTATTGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFFIILRA---AGSAVGN-GS------------FVR-LLFGTLIMLVFGYVGE---A------E--L-----------M----------------------NQ------ALA-FGLGMVGWAVIIYEI-----Y--A-GAAGTA-AK--E-AGAAV-Q-S-A-F-S-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_JX863174 [unk-Proteo1-b] MALINA_OTU14_095_L_env_samples_JX863174 gi|425477298|gb|JX863174| Uncultured bacterium clone MALINA OTU14 095 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU14 095 L putative proteorhodopsin gene, partial cds JX863174 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 08Aug2009 70m_depth Arctic Ocean marine 70.8 -133.73 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGATCACAGTGCCACTACTGATGATTGAGTTTTTCATCATACTTCGCGCCGCAGGTTCAGCGGTAGGCAATGGATCGTTCGTTCGATTGCTTTTTGGCACGCTCATCATGCTTGTGTTCGGATACATGGGCGAAGCTGAGCTCATGAATCAAGCGCTCGCGTTTGGCCTTGGGATAGTCGGTTGGGCGGTTATTATCTACGAAATCTATGCAGGTGCAGCAGGAACCGCGGCGAAAGAGGCCGGGGCGGCGGTGCAAAGCGCCTTTAGCGCAATGCGCTGGATTGTATTGGTC WLITVPLLMIEFFIILRAAGSAVGNGSFVRLLFGTLIMLVFGYMGEAELMNQALAFGLGIVGWAVIIYEIYAGAAGTAAKEAGAAVQSAFSAMRWIVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGATCACAGTGCCACTACTGATGATTGAGTTTTTCATCATACTTCGCGCC---------GCAGGTTCAGCGGTAGGCAAT---GGATCG------------------------------------TTCGTTCGA---TTGCTTTTTGGCACGCTCATCATGCTTGTGTTCGGATACATGGGCGAA---------GCT------------------GAG------CTC---------------------------------ATG------------------------------------------------------------------AATCAA------------------GCGCTCGCG---TTTGGCCTTGGGATAGTCGGTTGGGCGGTTATTATCTACGAAATC---------------TAT------GCA---GGTGCAGCAGGAACCGCG---GCGAAA------GAG---GCCGGGGCGGCGGTG---CAA---AGC---GCC---TTT---AGC---GCAATG---CGCTGGATTGTATTGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFFIILRA---AGSAVGN-GS------------FVR-LLFGTLIMLVFGYMGE---A------E--L-----------M----------------------NQ------ALA-FGLGIVGWAVIIYEI-----Y--A-GAAGTA-AK--E-AGAAV-Q-S-A-F-S-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_JX863249 [unk-Proteo1-b] MALINA_OTU08_376_L_env_samples_JX863249 gi|425477448|gb|JX863249| Uncultured bacterium clone MALINA OTU08 376 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU08 376 L putative proteorhodopsin mRNA, partial cds JX863249 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 02Aug2009 3m_depth Arctic Ocean marine 69.61 -138.23 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGATCACCGTACCATTATTAATGATAGAGTTCTTTATCATTCTTCGTGCAGCCGGTTCCAAGGTAGGCAACGGATCTTTTGTCAGGTTGCTTTTTGGTACTTTGATGATGCTGCTGTTTGGCTTCTTGGGCGAAGCGAACATAATGACAAATCAAGCACTTGCTTTTGGCCTTGGAATGGTAGGTTGGGCAATCATTATCTACGAGATATTTGCGGGCGCAGCAGGCAATGTCGCGAAAGAAGCAAACGAAGCGGTACGATCTGCATTCAGTGCAATGCGGCGGATTGTTTTGGTG WLITVPLLMIEFFIILRAAGSKVGNGSFVRLLFGTLMMLLFGFLGEANIMTNQALAFGLGMVGWAIIIYEIFAGAAGNVAKEANEAVRSAFSAMRRIVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATCACCGTACCATTATTAATGATAGAGTTCTTTATCATTCTTCGTGCA---------GCCGGTTCCAAGGTAGGCAAC---GGATCT------------------------------------TTTGTCAGG---TTGCTTTTTGGTACTTTGATGATGCTGCTGTTTGGCTTCTTGGGCGAA---------GCG------------------AAC------ATA---------------------------------ATG---------------------------------------------------------------ACAAATCAA------------------GCACTTGCT---TTTGGCCTTGGAATGGTAGGTTGGGCAATCATTATCTACGAGATA---------------TTT------GCG---GGCGCAGCAGGCAATGTC---GCGAAA------GAA---GCAAACGAAGCGGTA---CGA---TCT---GCA---TTC---AGT---GCAATG---CGGCGGATTGTTTTGGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFFIILRA---AGSKVGN-GS------------FVR-LLFGTLMMLLFGFLGE---A------N--I-----------M---------------------TNQ------ALA-FGLGMVGWAIIIYEI-----F--A-GAAGNV-AK--E-ANEAV-R-S-A-F-S-AM-RRIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_JX863154 [unk-Proteo1-b] MALINA_OTU08_409_L_env_samples_JX863154 gi|425477258|gb|JX863154| Uncultured bacterium clone MALINA OTU08 409 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU08 409 L putative proteorhodopsin gene, partial cds JX863154 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 16Aug2009 0m_depth Arctic Ocean marine 69.51 -133.42 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGATCACCGTACCATTATTAATGATAGAGTTCTTTATCATTCTTCGTGCAGCCGGTTCCAAGGTAGGCAACGGATCTTTTGTCAGGTTGCTTTTTGGTACTTTGATGATGCTGCCGTTTGGCTTCTTGGGCGAAGCGAACATAATGACAAATCAAGCACTTGCTTTTGGCCTTGGAATGGTAGGTTGGGCAATCATTATCTACGAGATATTTGCGGGCGCAGCAGGCAATGCCGCGAAAGAAGCAAACGAAGCGGTACGATCTGCATTCAGTGCAATGCGGTGGATTGTTTTGGTG WLITVPLLMIEFFIILRAAGSKVGNGSFVRLLFGTLMMLPFGFLGEANIMTNQALAFGLGMVGWAIIIYEIFAGAAGNAAKEANEAVRSAFSAMRWIVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATCACCGTACCATTATTAATGATAGAGTTCTTTATCATTCTTCGTGCA---------GCCGGTTCCAAGGTAGGCAAC---GGATCT------------------------------------TTTGTCAGG---TTGCTTTTTGGTACTTTGATGATGCTGCCGTTTGGCTTCTTGGGCGAA---------GCG------------------AAC------ATA---------------------------------ATG---------------------------------------------------------------ACAAATCAA------------------GCACTTGCT---TTTGGCCTTGGAATGGTAGGTTGGGCAATCATTATCTACGAGATA---------------TTT------GCG---GGCGCAGCAGGCAATGCC---GCGAAA------GAA---GCAAACGAAGCGGTA---CGA---TCT---GCA---TTC---AGT---GCAATG---CGGTGGATTGTTTTGGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFFIILRA---AGSKVGN-GS------------FVR-LLFGTLMMLPFGFLGE---A------N--I-----------M---------------------TNQ------ALA-FGLGMVGWAIIIYEI-----F--A-GAAGNA-AK--E-ANEAV-R-S-A-F-S-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_JX863150 [unk-Proteo1-b] MALINA_OTU08_201_L_env_samples_JX863150 gi|425477250|gb|JX863150| Uncultured bacterium clone MALINA OTU08 201 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU08 201 L putative proteorhodopsin gene, partial cds JX863150 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 02Aug2009 45m_depth Arctic Ocean marine 69.61 -138.23 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGATCACCGTACCATTATTAATGATAGAGTTCTTTATCATTCTTCGTGCAGCCGGTTCCAAGGTAGGCAACGGATCTTTTGTCAGGTTGCTTTTTGGTACTTTGATGATGCTGCTGTTTGGCTTCTTGGGCGAAGCGAACATAATGACAAATCAAGCACTTGCTTTTGGCCTTGGAATGGTAGGTTGGGCAATCATTATCCACGAGATATTTGCGGGCGCAGCAGGCAATGCCGCGAAAGAAGCAAACGAAGCGGTACGATCTGCATTCAGTGCAATGCGGTGGATTGTTTTGGTG WLITVPLLMIEFFIILRAAGSKVGNGSFVRLLFGTLMMLLFGFLGEANIMTNQALAFGLGMVGWAIIIHEIFAGAAGNAAKEANEAVRSAFSAMRWIVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATCACCGTACCATTATTAATGATAGAGTTCTTTATCATTCTTCGTGCA---------GCCGGTTCCAAGGTAGGCAAC---GGATCT------------------------------------TTTGTCAGG---TTGCTTTTTGGTACTTTGATGATGCTGCTGTTTGGCTTCTTGGGCGAA---------GCG------------------AAC------ATA---------------------------------ATG---------------------------------------------------------------ACAAATCAA------------------GCACTTGCT---TTTGGCCTTGGAATGGTAGGTTGGGCAATCATTATCCACGAGATA---------------TTT------GCG---GGCGCAGCAGGCAATGCC---GCGAAA------GAA---GCAAACGAAGCGGTA---CGA---TCT---GCA---TTC---AGT---GCAATG---CGGTGGATTGTTTTGGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFFIILRA---AGSKVGN-GS------------FVR-LLFGTLMMLLFGFLGE---A------N--I-----------M---------------------TNQ------ALA-FGLGMVGWAIIIHEI-----F--A-GAAGNA-AK--E-ANEAV-R-S-A-F-S-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_JX863149 [unk-Proteo1-b] MALINA_OTU08_429_L_env_samples_JX863149 gi|425477248|gb|JX863149| Uncultured bacterium clone MALINA OTU08 429 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU08 429 L putative proteorhodopsin gene, partial cds JX863149 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 13Aug2009 0m_depth Arctic Ocean marine 69.25 -137.2 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGATCACCGTACCATTATTAATGATAGAGTTCTTTATCATTCTTCGTGCAGCCGGTTCCAAGGTAGGCAACGGATCTTTTGTCAGGCTGCTTTTTGGTACTTTGATGATGCTGCTGTTTGGCTTCTTGGGCGAAGCGAACATAATGACAAATCAAGCACTTGCTTTTGGCCTTGGAATGGTAGGTTGGGCAATCATTATCTACGAGATATTTGCGGGCGCAGCAGGCAATGCCGCGAAAGAAGCAAACGAAGCGGTACGATCTGCATTCAGTGCAATGCGGTGGATTGTTTTGGTG WLITVPLLMIEFFIILRAAGSKVGNGSFVRLLFGTLMMLLFGFLGEANIMTNQALAFGLGMVGWAIIIYEIFAGAAGNAAKEANEAVRSAFSAMRWIVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATCACCGTACCATTATTAATGATAGAGTTCTTTATCATTCTTCGTGCA---------GCCGGTTCCAAGGTAGGCAAC---GGATCT------------------------------------TTTGTCAGG---CTGCTTTTTGGTACTTTGATGATGCTGCTGTTTGGCTTCTTGGGCGAA---------GCG------------------AAC------ATA---------------------------------ATG---------------------------------------------------------------ACAAATCAA------------------GCACTTGCT---TTTGGCCTTGGAATGGTAGGTTGGGCAATCATTATCTACGAGATA---------------TTT------GCG---GGCGCAGCAGGCAATGCC---GCGAAA------GAA---GCAAACGAAGCGGTA---CGA---TCT---GCA---TTC---AGT---GCAATG---CGGTGGATTGTTTTGGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFFIILRA---AGSKVGN-GS------------FVR-LLFGTLMMLLFGFLGE---A------N--I-----------M---------------------TNQ------ALA-FGLGMVGWAIIIYEI-----F--A-GAAGNA-AK--E-ANEAV-R-S-A-F-S-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_JX863152 [unk-Proteo1-b] MALINA_OTU08_385_L_env_samples_JX863152 gi|425477254|gb|JX863152| Uncultured bacterium clone MALINA OTU08 385 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU08 385 L putative proteorhodopsin gene, partial cds JX863152 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 16Aug2009 0m_depth Arctic Ocean marine 69.51 -133.42 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGATCACCGTACCATTATTAATGATAGAGTTCTTTATCATTCTTCGTGCAGCCGGTTCCAAGGTAGGCAACGGATCTTTTGTCAGGCTGCTTTTTGGTACTTTGATGATGCTGCTGTTTGGCTTCTTGGGCGAAGCGAACATAATGACAAATCAAGCACTTGCTTTTGGCCTTGGAATGGTAGGTTGGGCAATCATTATCTACGAGATATTTGCGGGCGCAGCAGGCAATGCCGCGAAAGAAGCAAACGAAGCGGTACGATCTGCATTCAGTGCAATGCGGTGGATTGCTTTGGTG WLITVPLLMIEFFIILRAAGSKVGNGSFVRLLFGTLMMLLFGFLGEANIMTNQALAFGLGMVGWAIIIYEIFAGAAGNAAKEANEAVRSAFSAMRWIALV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATCACCGTACCATTATTAATGATAGAGTTCTTTATCATTCTTCGTGCA---------GCCGGTTCCAAGGTAGGCAAC---GGATCT------------------------------------TTTGTCAGG---CTGCTTTTTGGTACTTTGATGATGCTGCTGTTTGGCTTCTTGGGCGAA---------GCG------------------AAC------ATA---------------------------------ATG---------------------------------------------------------------ACAAATCAA------------------GCACTTGCT---TTTGGCCTTGGAATGGTAGGTTGGGCAATCATTATCTACGAGATA---------------TTT------GCG---GGCGCAGCAGGCAATGCC---GCGAAA------GAA---GCAAACGAAGCGGTA---CGA---TCT---GCA---TTC---AGT---GCAATG---CGGTGGATTGCTTTGGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFFIILRA---AGSKVGN-GS------------FVR-LLFGTLMMLLFGFLGE---A------N--I-----------M---------------------TNQ------ALA-FGLGMVGWAIIIYEI-----F--A-GAAGNA-AK--E-ANEAV-R-S-A-F-S-AM-RWIALV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_JX863155 [unk-Proteo1-b] MALINA_OTU08_416_L_env_samples_JX863155 gi|425477260|gb|JX863155| Uncultured bacterium clone MALINA OTU08 416 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU08 416 L putative proteorhodopsin gene, partial cds JX863155 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 16Aug2009 0m_depth Arctic Ocean marine 69.51 -133.42 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGATCACCGTACCATTATTAATGATAGAGTTCTTTATCATTCTTCGTGCAGCCGGTTCCAAGGTAGGCAACGGATCTTTTGTCAGGCCGCTTTTTGGTACTTTGATGATGCTGCTGTTTGGCTTCTTGGGCGAAGCGAACATAATGACAAATCAAGCACTTGCTTTTGGCCTTGGAATGGTAGGTTGGGCAATCATTATCTACGAGATATTTGCGGGCGCAGCAGGCAATGCCGCGAAAGAAGCAAACGAAGCGGTACGATCTGCATTCAGTGCAATGCGGTGGATTGTTTTGGTG WLITVPLLMIEFFIILRAAGSKVGNGSFVRPLFGTLMMLLFGFLGEANIMTNQALAFGLGMVGWAIIIYEIFAGAAGNAAKEANEAVRSAFSAMRWIVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATCACCGTACCATTATTAATGATAGAGTTCTTTATCATTCTTCGTGCA---------GCCGGTTCCAAGGTAGGCAAC---GGATCT------------------------------------TTTGTCAGG---CCGCTTTTTGGTACTTTGATGATGCTGCTGTTTGGCTTCTTGGGCGAA---------GCG------------------AAC------ATA---------------------------------ATG---------------------------------------------------------------ACAAATCAA------------------GCACTTGCT---TTTGGCCTTGGAATGGTAGGTTGGGCAATCATTATCTACGAGATA---------------TTT------GCG---GGCGCAGCAGGCAATGCC---GCGAAA------GAA---GCAAACGAAGCGGTA---CGA---TCT---GCA---TTC---AGT---GCAATG---CGGTGGATTGTTTTGGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFFIILRA---AGSKVGN-GS------------FVR-PLFGTLMMLLFGFLGE---A------N--I-----------M---------------------TNQ------ALA-FGLGMVGWAIIIYEI-----F--A-GAAGNA-AK--E-ANEAV-R-S-A-F-S-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_JX863248 [unk-Proteo1-b] MALINA_OTU08_084_L_env_samples_JX863248 gi|425477446|gb|JX863248| Uncultured bacterium clone MALINA OTU08 084 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU08 084 L putative proteorhodopsin mRNA, partial cds JX863248 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 09Aug2009 3m_depth Arctic Ocean marine 71.57 -133.94 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGATCACCGTACCATTATTAATGATAGAGTTCTTTATCATTCTTCGTGCAGCCGGTTCCAAGGTAGGCAACGGATCTTTTGTCAGGCTGCTTTTTGGTACTTTGATGATGCTGCTGTTTGGCTTCTTGGGCGAAGCGAACACAATGACAAATCAAGCACTTGCTTTTGGCCTTGGAATGGTAGGTTGGGCAATCATTATCTACGAGATATTTGCGGGCGCAGCAGGCAATGCCGCGAAAGAAGCAAACGAAGCGGTACGATCTGCATTCAGTGCAATGCGGTGGATTGTTTTGGTG WLITVPLLMIEFFIILRAAGSKVGNGSFVRLLFGTLMMLLFGFLGEANTMTNQALAFGLGMVGWAIIIYEIFAGAAGNAAKEANEAVRSAFSAMRWIVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATCACCGTACCATTATTAATGATAGAGTTCTTTATCATTCTTCGTGCA---------GCCGGTTCCAAGGTAGGCAAC---GGATCT------------------------------------TTTGTCAGG---CTGCTTTTTGGTACTTTGATGATGCTGCTGTTTGGCTTCTTGGGCGAA---------GCG------------------AAC------ACA---------------------------------ATG---------------------------------------------------------------ACAAATCAA------------------GCACTTGCT---TTTGGCCTTGGAATGGTAGGTTGGGCAATCATTATCTACGAGATA---------------TTT------GCG---GGCGCAGCAGGCAATGCC---GCGAAA------GAA---GCAAACGAAGCGGTA---CGA---TCT---GCA---TTC---AGT---GCAATG---CGGTGGATTGTTTTGGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFFIILRA---AGSKVGN-GS------------FVR-LLFGTLMMLLFGFLGE---A------N--T-----------M---------------------TNQ------ALA-FGLGMVGWAIIIYEI-----F--A-GAAGNA-AK--E-ANEAV-R-S-A-F-S-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_JX863151 [unk-Proteo1-b] MALINA_OTU08_257_L_env_samples_JX863151 gi|425477252|gb|JX863151| Uncultured bacterium clone MALINA OTU08 257 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU08 257 L putative proteorhodopsin gene, partial cds JX863151 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 13Aug2009 0m_depth Arctic Ocean marine 69.25 -137.2 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGATCACCGTACCATTATTAATGATAGAGTTCTTTATCATTCTTCGTGCAGCCGGTTCCAAGGTAGGCAACGGATCTTTTGTCAGGCTGCTTTTTGGTACTTTGATGATGCTGCTGTTTGGCTTCTTGGGCGAAGCGAGCATAATGACAAATCAAGCACTTGCTTTTGGCCTTGGAATGGTAGGTTGGGCAATCATTATCTACGAGATATTTGTGGGCGCAGCAGGCAATGCCGCGAAAGAAGCAAACGAAGCGGTACGATCTGCATTCAGTGCAATGCGGTGGATTGTTTTGGTG WLITVPLLMIEFFIILRAAGSKVGNGSFVRLLFGTLMMLLFGFLGEASIMTNQALAFGLGMVGWAIIIYEIFVGAAGNAAKEANEAVRSAFSAMRWIVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATCACCGTACCATTATTAATGATAGAGTTCTTTATCATTCTTCGTGCA---------GCCGGTTCCAAGGTAGGCAAC---GGATCT------------------------------------TTTGTCAGG---CTGCTTTTTGGTACTTTGATGATGCTGCTGTTTGGCTTCTTGGGCGAA---------GCG------------------AGC------ATA---------------------------------ATG---------------------------------------------------------------ACAAATCAA------------------GCACTTGCT---TTTGGCCTTGGAATGGTAGGTTGGGCAATCATTATCTACGAGATA---------------TTT------GTG---GGCGCAGCAGGCAATGCC---GCGAAA------GAA---GCAAACGAAGCGGTA---CGA---TCT---GCA---TTC---AGT---GCAATG---CGGTGGATTGTTTTGGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFFIILRA---AGSKVGN-GS------------FVR-LLFGTLMMLLFGFLGE---A------S--I-----------M---------------------TNQ------ALA-FGLGMVGWAIIIYEI-----F--V-GAAGNA-AK--E-ANEAV-R-S-A-F-S-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_JX863153 [unk-Proteo1-b] MALINA_OTU08_387_L_env_samples_JX863153 gi|425477256|gb|JX863153| Uncultured bacterium clone MALINA OTU08 387 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU08 387 L putative proteorhodopsin gene, partial cds JX863153 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 16Aug2009 0m_depth Arctic Ocean marine 69.51 -133.42 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGATCACCGTACCATTATTAATGATAGAGTTCTTTATCATTCTTCGTGCAGCCGGTTCCAAGGTAGGCAACGGATCTTTTGTCAGGTTGCTTTTTGGTACTTTGATGATGCTGCTGTTTGGCTTCTTGGGCGAAGCGGAAATAATGACAAATCAAGCACTTGCTTTTGGCCTTGGAATGGTAGATTGGGCAATCATTATCTACGAGATATTTGCGGGCGCAGCAGGCAATGCCACGAAAGAAGCAAACGAAGCGGTAAGGTCTGCATTCAGTGCAATGCGGTGGATTGTTTTGGTG WLITVPLLMIEFFIILRAAGSKVGNGSFVRLLFGTLMMLLFGFLGEAEIMTNQALAFGLGMVDWAIIIYEIFAGAAGNATKEANEAVRSAFSAMRWIVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATCACCGTACCATTATTAATGATAGAGTTCTTTATCATTCTTCGTGCA---------GCCGGTTCCAAGGTAGGCAAC---GGATCT------------------------------------TTTGTCAGG---TTGCTTTTTGGTACTTTGATGATGCTGCTGTTTGGCTTCTTGGGCGAA---------GCG------------------GAA------ATA---------------------------------ATG---------------------------------------------------------------ACAAATCAA------------------GCACTTGCT---TTTGGCCTTGGAATGGTAGATTGGGCAATCATTATCTACGAGATA---------------TTT------GCG---GGCGCAGCAGGCAATGCC---ACGAAA------GAA---GCAAACGAAGCGGTA---AGG---TCT---GCA---TTC---AGT---GCAATG---CGGTGGATTGTTTTGGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFFIILRA---AGSKVGN-GS------------FVR-LLFGTLMMLLFGFLGE---A------E--I-----------M---------------------TNQ------ALA-FGLGMVDWAIIIYEI-----F--A-GAAGNA-TK--E-ANEAV-R-S-A-F-S-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_DQ203607 [unk-Proteo1-b] medHO120C6_env_samples_DQ203607 gi|77547662|gb|DQ203607| Uncultured bacterium clone medHO120C6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120C6 predicted proteorhodopsin gene, partial cds DQ203607 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTACATTGACTGGCTGATTACCGTACCGCTCTTAATGATCGAATTCTTCCTTATCTTGCGCGCAGTCGGTGCATCAGTGGGAGCTGGATCATTCATGCGGCTGTTAGTCGGTACTTTAGTCATGCTCGTATTTGGCTACGCGGGTGAAGCTGGGTTGATGGATTACACGTTGGGATTCATCCTAGGGATGGTCGGCTGGTTTGTGATCATCTATGAGATTTTCGCTGGAGAAGCTGGGAAAGCTGCGGGTAATGCCTCAGGGTCTGTTCAGTCAGCATACAATGCGATGCGTTGGATTGTGCTAGTTGGCTGGGCGATTTATCCA RYIDWLITVPLLMIEFFLILRAVGASVGAGSFMRLLVGTLVMLVFGYAGEAGLMDYTLGFILGMVGWFVIIYEIFAGEAGKAAGNASGSVQSAYNAMRWIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATTGACTGG------------------------CTGATTACCGTACCGCTCTTAATGATCGAATTCTTCCTTATCTTGCGCGCA---------GTCGGTGCATCAGTGGGAGCT---GGATCA------------------------------------TTCATGCGG---CTGTTAGTCGGTACTTTAGTCATGCTCGTATTTGGCTACGCGGGTGAA---------GCT------------------GGG------TTG---------------------------------ATG------------------------------------------------------------------GATTAC------------------ACGTTGGGA---TTCATCCTAGGGATGGTCGGCTGGTTTGTGATCATCTATGAGATT---------------TTC------GCT---GGAGAAGCTGGGAAAGCT---GCGGGT------AAT---GCCTCAGGGTCTGTT---CAG---TCA---GCA---TAC---AAT---GCGATG---CGTTGGATTGTGCTAGTT---------------------------------------------------------------GGCTGG---------GCGATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMIEFFLILRA---VGASVGA-GS------------FMR-LLVGTLVMLVFGYAGE---A------G--L-----------M----------------------DY------TLG-FILGMVGWFVIIYEI-----F--A-GEAGKA-AG--N-ASGSV-Q-S-A-Y-N-AM-RWIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_DQ203511 [unk-Proteo1-b] MedHO1202B6_env_samples_DQ203511 gi|77547470|gb|DQ203511| Uncultured bacterium clone MedHO1202B6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202B6 predicted proteorhodopsin gene, partial cds DQ203511 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGTTGATCACGGTACCGCTCCTGATGATCGAATTCTTCATCATATTGCGTGCGGTAGGTGGAGCAGTAGGCGCAGGTTCTTTCATGCGGCTATTGGTCGGTACGCTAGTCATGCTCGTGTTTGGCTATGCAGGCGAAGCGGGTCTGATGGACTACTGGGTCGGTTTCGGTCTTGGAATGATTGGATGGGCGGTAATCATCTATGAGGTCTATGGCGGTGAAGCTGGAAAGGCCGCTGCTGCCTCTTCGGAGTCCGTACAGTCAGCATTTAACGCCATGCGATGGATCGTGTTAGTGGGCTGGGCCATTTATCCA RYIDWLITVPLLMIEFFIILRAVGGAVGAGSFMRLLVGTLVMLVFGYAGEAGLMDYWVGFGLGMIGWAVIIYEVYGGEAGKAAAASSESVQSAFNAMRWIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------TTGATCACGGTACCGCTCCTGATGATCGAATTCTTCATCATATTGCGTGCG---------GTAGGTGGAGCAGTAGGCGCA---GGTTCT------------------------------------TTCATGCGG---CTATTGGTCGGTACGCTAGTCATGCTCGTGTTTGGCTATGCAGGCGAA---------GCG------------------GGT------CTG---------------------------------ATG------------------------------------------------------------------GACTAC------------------TGGGTCGGT---TTCGGTCTTGGAATGATTGGATGGGCGGTAATCATCTATGAGGTC---------------TAT------GGC---GGTGAAGCTGGAAAGGCC---GCTGCT------GCC---TCTTCGGAGTCCGTA---CAG---TCA---GCA---TTT---AAC---GCCATG---CGATGGATCGTGTTAGTG---------------------------------------------------------------GGCTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMIEFFIILRA---VGGAVGA-GS------------FMR-LLVGTLVMLVFGYAGE---A------G--L-----------M----------------------DY------WVG-FGLGMIGWAVIIYEV-----Y--G-GEAGKA-AA--A-SSESV-Q-S-A-F-N-AM-RWIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_1105089897576 [unk-Proteo1-b] JCVI_ORF_1105089897576_GS019_Coastal_2m jcvi|1105089897576| 1105089897576 JCVI ORF 1105089897576 1105089897576 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 12-janv-04 Coastal/2m_depth/S_35.4_psu/GS019/Northeast_of_Colon/Caribbean_Sea Caribbean Sea marine 10.716389 -80.25445 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGTTTTTAGTGCAAGGCGACTTGGTTGGTGTCAGCTTCTGGCTGGTATCGATTGCAATGGTCGCGTCAACCGTTTTCTTTCTATACGAAGGATTGCGCGTCAAACCACAGTGGCGTCTCTCGCTACTGGTAGCTGGTCTTGTTACCTTAGTGGCCGGCGTTCACTACGACTATATGCGGGATTTCTGGGTCGTAAACCAATCCACTCCGATTGATTATCGTTACATCGACTGGCTAATCACTGTGCCGCTTCTGATGATCGAATTCTTCATCATTTTGCGTGCGGTTGGTGCAGCGGTAGGGGCAGGTTCGTTTCTTCGACTGTTGCTCGGCACATTGCTCATGCTTGTGTTTGGCTACGCTGGTGAAGCTAAGCTCATGGACTACTGGGTAGGATTTGGCATTGGAATGATTGGATGGTTGGTGATCATCTATGAAATCTATGGCGGCGAGGCTGGAAAAGCTGCTGCGAATGCCGACGAGTCGGTACAATCAGCATTCAACGCTATGCGATGGATTGTCTTGGTCGGTTGGGCTATTTACCCTCTGGGGTATATTTTCGGAACCAACAGCCCAGACCAGCTGAACATCATTTACAACTTGGCTGACTTCGTGAACAAAATCTTGTTTGGCTTGATCATCTGGAACCTTGCAGTCAAGGATTCAGGCGATACAGCGCAC MFLVQGDLVGVSFWLVSIAMVASTVFFLYEGLRVKPQWRLSLLVAGLVTLVAGVHYDYMRDFWVVNQSTPIDYRYIDWLITVPLLMIEFFIILRAVGAAVGAGSFLRLLLGTLLMLVFGYAGEAKLMDYWVGFGIGMIGWLVIIYEIYGGEAGKAAANADESVQSAFNAMRWIVLVGWAIYPLGYIFGTNSPDQLNIIYNLADFVNKILFGLIIWNLAVKDSGDTAH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTTTTTAGTGCAAGGCGACTTGGTTGGTGTCAGCTTCTGGCTGGTATCGATTGCAATGGTCGCGTCAACCGTTTTCTTTCTATACGAAGGATTGCGCGTCAAACCA---CAGTGGCGTCTCTCGCTACTGGTAGCTGGTCTTGTTACCTTAGTGGCCGGCGTTCACTACGACTATATGCGGGATTTCTGGGTC---------------------------------------------------GTAAACCAATCCACTCCGATTGATTATCGTTACATCGACTGG------------------------CTAATCACTGTGCCGCTTCTGATGATCGAATTCTTCATCATTTTGCGTGCG---------GTTGGTGCAGCGGTAGGGGCA---GGTTCG------------------------------------TTTCTTCGA---CTGTTGCTCGGCACATTGCTCATGCTTGTGTTTGGCTACGCTGGTGAA---------GCT------------------AAG------CTC---------------------------------ATG------------------------------------------------------------------GACTAC------------------TGGGTAGGA---TTTGGCATTGGAATGATTGGATGGTTGGTGATCATCTATGAAATC---------------TAT------GGC---GGCGAGGCTGGAAAAGCT---GCTGCG------AAT---GCCGACGAGTCGGTA---CAA---TCA---GCA---TTC---AAC---GCTATG---CGATGGATTGTCTTGGTC---------------------------------------------------------------GGTTGG---------GCTATTTACCCTCTGGGGTATATTTTCGGAACCAAC---------------------------------------------------AGCCCAGACCAGCTGAACATCATTTACAACTTGGCTGACTTCGTGAACAAAATCTTGTTTGGCTTGATCATCTGGAACCTTGCAGTCAAGGATTCAGGCGATACAGCGCAC------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------------------------------MFLVQGDLVGVSFWLVSIAMVASTVFFLYEGLRVKP-QWRLSLLVAGLVTLVAGVHYDYMRDFWV-----------------VNQSTPIDYRYIDW--------LITVPLLMIEFFIILRA---VGAAVGA-GS------------FLR-LLLGTLLMLVFGYAGE---A------K--L-----------M----------------------DY------WVG-FGIGMIGWLVIIYEI-----Y--G-GEAGKA-AA--N-ADESV-Q-S-A-F-N-AM-RWIVLV---------------------GW---AIYPLGYIFGTN-----------------SPDQLNIIYNLADFVNKILFGLIIWNLAVKDSGDTAH------------------------------------ [unk-Proteo1-b]_JX863292 [unk-Proteo1-b] MALINA_OTU36_024_Q_env_samples_JX863292 gi|425477534|gb|JX863292| Uncultured bacterium clone MALINA OTU36 024 Q putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU36 024 Q putative proteorhodopsin mRNA, partial cds JX863292 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 07Aug2009 20m_depth Arctic Ocean marine 70.91 -128.92 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGATTACTGTGCCGCTGCAAATGATAGAATTTTATATCATCCTAGTAGCCGCGGGAGCAGCGATTGGATCAGCAACATTCGTTCGTTTATTAGTTGGAACGTTAGCCATGCTTCTTTTTGGCCACCTAGGCGAAGCGGGACTCATGAACGTGTTGTTAGCCTTTGCGCTCGGTATGGTCGGATGGGCCATTATCATCTATGAGATTTTCATTGGTGCCGCCAGTTCAGCTGCGAAAGCGACCGGAGGAGTAGTGATGTCGGCCTTTAATGCGATGCGAATGATCGTACTTGTC WLITVPLQMIEFYIILVAAGAAIGSATFVRLLVGTLAMLLFGHLGEAGLMNVLLAFALGMVGWAIIIYEIFIGAASSAAKATGGVVMSAFNAMRMIVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATTACTGTGCCGCTGCAAATGATAGAATTTTATATCATCCTAGTAGCC---------GCGGGAGCAGCGATTGGATCA---GCAACA------------------------------------TTCGTTCGT---TTATTAGTTGGAACGTTAGCCATGCTTCTTTTTGGCCACCTAGGCGAA---------GCG------------------GGA------CTC---------------------------------ATG------------------------------------------------------------------AACGTG------------------TTGTTAGCC---TTTGCGCTCGGTATGGTCGGATGGGCCATTATCATCTATGAGATT---------------TTC------ATT---GGTGCCGCCAGTTCAGCTGCG---AAA------GCG---ACCGGAGGAGTAGTG---ATG---TCG---GCC---TTT---AAT---GCGATG---CGAATGATCGTACTTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLQMIEFYIILVA---AGAAIGS-AT------------FVR-LLVGTLAMLLFGHLGE---A------G--L-----------M----------------------NV------LLA-FALGMVGWAIIIYEI-----F--I-GAASSAA-K--A-TGGVV-M-S-A-F-N-AM-RMIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_JX863296 [unk-Proteo1-b] MALINA_OTU36_035_Q_env_samples_JX863296 gi|425477542|gb|JX863296| Uncultured bacterium clone MALINA OTU36 035 Q putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU36 035 Q putative proteorhodopsin mRNA, partial cds JX863296 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 07Aug2009 20m_depth Arctic Ocean marine 70.91 -128.92 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGATTACTGTGCCGCTGCAAATGATAGAATTTTATATCATCCTAGTAACCGCGGGAGCAGCGATTGGATCAGCAACATTCGTTCGTTTATTAGTTGGAACGTTAGCCATGCTTCTTTTTGGCTACCTAGGCGAAGCGGGACTCATGAACGTGTTGTTAGCCTTTGCGCTCGGTATGGTCGGATGGGCCATTATCATCTATGAGATTTTCATTGGTGCCGCCAGTTCAGCTGCGAAAGCGACCGGAGGAGTAGTGATGTCGGCCTTTAATGCGATGCGAATGATCGTACTTGTC WLITVPLQMIEFYIILVTAGAAIGSATFVRLLVGTLAMLLFGYLGEAGLMNVLLAFALGMVGWAIIIYEIFIGAASSAAKATGGVVMSAFNAMRMIVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATTACTGTGCCGCTGCAAATGATAGAATTTTATATCATCCTAGTAACC---------GCGGGAGCAGCGATTGGATCA---GCAACA------------------------------------TTCGTTCGT---TTATTAGTTGGAACGTTAGCCATGCTTCTTTTTGGCTACCTAGGCGAA---------GCG------------------GGA------CTC---------------------------------ATG------------------------------------------------------------------AACGTG------------------TTGTTAGCC---TTTGCGCTCGGTATGGTCGGATGGGCCATTATCATCTATGAGATT---------------TTC------ATT---GGTGCCGCCAGTTCAGCTGCG---AAA------GCG---ACCGGAGGAGTAGTG---ATG---TCG---GCC---TTT---AAT---GCGATG---CGAATGATCGTACTTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLQMIEFYIILVT---AGAAIGS-AT------------FVR-LLVGTLAMLLFGYLGE---A------G--L-----------M----------------------NV------LLA-FALGMVGWAIIIYEI-----F--I-GAASSAA-K--A-TGGVV-M-S-A-F-N-AM-RMIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_JX863290 [unk-Proteo1-b] MALINA_OTU36_008_Q_env_samples_JX863290 gi|425477530|gb|JX863290| Uncultured bacterium clone MALINA OTU36 008 Q putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU36 008 Q putative proteorhodopsin mRNA, partial cds JX863290 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 07Aug2009 20m_depth Arctic Ocean marine 70.91 -128.92 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGATTACTGTGCCGCTGCAAATGATAGAATTTTATATCATCCTAGTAGCCGCGGGAGCAGCGATTGGATCAGCAACATTCGTTCATTTATTAGTTGGAACGTTAGCCATGCTTCTTTTTGGCTACCTAGGCGAAGCGGGACTCATGAACGTGTTGTTAGCCTTTGCGCTCGGTATGGTCGGATGGGCCATTATCATCTATGAGATTTTCATTGGTGCCGCCAGTTCAGCTGCGAAAGCGACCGGAGGAGTAGTGATGTCGGCCTTTAATGCGATGCGAATGATCGTACTTGTC WLITVPLQMIEFYIILVAAGAAIGSATFVHLLVGTLAMLLFGYLGEAGLMNVLLAFALGMVGWAIIIYEIFIGAASSAAKATGGVVMSAFNAMRMIVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATTACTGTGCCGCTGCAAATGATAGAATTTTATATCATCCTAGTAGCC---------GCGGGAGCAGCGATTGGATCA---GCAACA------------------------------------TTCGTTCAT---TTATTAGTTGGAACGTTAGCCATGCTTCTTTTTGGCTACCTAGGCGAA---------GCG------------------GGA------CTC---------------------------------ATG------------------------------------------------------------------AACGTG------------------TTGTTAGCC---TTTGCGCTCGGTATGGTCGGATGGGCCATTATCATCTATGAGATT---------------TTC------ATT---GGTGCCGCCAGTTCAGCTGCG---AAA------GCG---ACCGGAGGAGTAGTG---ATG---TCG---GCC---TTT---AAT---GCGATG---CGAATGATCGTACTTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLQMIEFYIILVA---AGAAIGS-AT------------FVH-LLVGTLAMLLFGYLGE---A------G--L-----------M----------------------NV------LLA-FALGMVGWAIIIYEI-----F--I-GAASSAA-K--A-TGGVV-M-S-A-F-N-AM-RMIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_JX863289 [unk-Proteo1-b] MALINA_OTU36_072_Q_env_samples_JX863289 gi|425477528|gb|JX863289| Uncultured bacterium clone MALINA OTU36 072 Q putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU36 072 Q putative proteorhodopsin mRNA, partial cds JX863289 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 07Aug2009 5m_depth Arctic Ocean marine 70.91 -128.92 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGATTACTGTGCCGCTGCAAATGATAGAATTTTATATCATCCTAGTAGCCGCGGGAGCAGCGATTGGATCAGCAACATTCGTTCGTTTATTAGTTGGAACGTTAGCCATGCTTCTTTTTGGCTACCTAGGCGAAGCGGGACTCATGAACGTGTTGTTAGCCTTTGCGCTCGGTATGGTCGGATGGGCCATTATCATCTATGAGATTTTCATTGGTGCCGCCAGTTCAGCTGCGAAAGCGACCGGAGGAGTAGTGATGTCGGCCTTTAATGCGATGCGAATGATCGTACTTGTC WLITVPLQMIEFYIILVAAGAAIGSATFVRLLVGTLAMLLFGYLGEAGLMNVLLAFALGMVGWAIIIYEIFIGAASSAAKATGGVVMSAFNAMRMIVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATTACTGTGCCGCTGCAAATGATAGAATTTTATATCATCCTAGTAGCC---------GCGGGAGCAGCGATTGGATCA---GCAACA------------------------------------TTCGTTCGT---TTATTAGTTGGAACGTTAGCCATGCTTCTTTTTGGCTACCTAGGCGAA---------GCG------------------GGA------CTC---------------------------------ATG------------------------------------------------------------------AACGTG------------------TTGTTAGCC---TTTGCGCTCGGTATGGTCGGATGGGCCATTATCATCTATGAGATT---------------TTC------ATT---GGTGCCGCCAGTTCAGCTGCG---AAA------GCG---ACCGGAGGAGTAGTG---ATG---TCG---GCC---TTT---AAT---GCGATG---CGAATGATCGTACTTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLQMIEFYIILVA---AGAAIGS-AT------------FVR-LLVGTLAMLLFGYLGE---A------G--L-----------M----------------------NV------LLA-FALGMVGWAIIIYEI-----F--I-GAASSAA-K--A-TGGVV-M-S-A-F-N-AM-RMIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_JX863293 [unk-Proteo1-b] MALINA_OTU36_026_Q_env_samples_JX863293 gi|425477536|gb|JX863293| Uncultured bacterium clone MALINA OTU36 026 Q putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU36 026 Q putative proteorhodopsin mRNA, partial cds JX863293 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 07Aug2009 20m_depth Arctic Ocean marine 70.91 -128.92 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGATTACTGTGCCGCTGCAAATGATAGAATTTTATATCATCCTAGTAGCCGCGGGAGCAGCGATTGGATCAGCAACATTCGTTCGTTTATTAGTTGGAACGTTAGCCATGCTTCTTTTTGGCTACCTAGGCGAAGCGGGACTCATGAACGTGTTGTTAGCCTTTGCGCTCGGTATGGTCGGATGGGCCATTATCATCTATGAGATTTTCATTGGTGCCGCCAGTTCAGCTGCGAAAGCGACCGGAGGAGTAGTGATGTCGGCCTTTAGTGCGATGCGAATGATCGTACTTGTC WLITVPLQMIEFYIILVAAGAAIGSATFVRLLVGTLAMLLFGYLGEAGLMNVLLAFALGMVGWAIIIYEIFIGAASSAAKATGGVVMSAFSAMRMIVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATTACTGTGCCGCTGCAAATGATAGAATTTTATATCATCCTAGTAGCC---------GCGGGAGCAGCGATTGGATCA---GCAACA------------------------------------TTCGTTCGT---TTATTAGTTGGAACGTTAGCCATGCTTCTTTTTGGCTACCTAGGCGAA---------GCG------------------GGA------CTC---------------------------------ATG------------------------------------------------------------------AACGTG------------------TTGTTAGCC---TTTGCGCTCGGTATGGTCGGATGGGCCATTATCATCTATGAGATT---------------TTC------ATT---GGTGCCGCCAGTTCAGCTGCG---AAA------GCG---ACCGGAGGAGTAGTG---ATG---TCG---GCC---TTT---AGT---GCGATG---CGAATGATCGTACTTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLQMIEFYIILVA---AGAAIGS-AT------------FVR-LLVGTLAMLLFGYLGE---A------G--L-----------M----------------------NV------LLA-FALGMVGWAIIIYEI-----F--I-GAASSAA-K--A-TGGVV-M-S-A-F-S-AM-RMIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_JX863291 [unk-Proteo1-b] MALINA_OTU36_009_Q_env_samples_JX863291 gi|425477532|gb|JX863291| Uncultured bacterium clone MALINA OTU36 009 Q putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU36 009 Q putative proteorhodopsin mRNA, partial cds JX863291 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 07Aug2009 20m_depth Arctic Ocean marine 70.91 -128.92 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGATTACTGTGCCGCTGCAAATGATAGAATTTTATATCATCCTAGTAGCCGCGGGAGCAGCGATTGGATCAGCAACATTCGTTCGTTTATTAGTTGGAACGTTAGCCATGCTTCCTTTTGGCTACCTAGGCGAAGCGGGACTCATGAACGTGTTGTTAGCCTTTGCGCTCGGTATGGTCGGATGGGCCATTATCATCTATGAGATTTTCATTGGTGCCGCCAGTTCAGCTGCGAAAGCGACCGGAGGAGTAGTGATGTCGGCCTTTAATGCGATGCGAATGATCGTACTTGTC WLITVPLQMIEFYIILVAAGAAIGSATFVRLLVGTLAMLPFGYLGEAGLMNVLLAFALGMVGWAIIIYEIFIGAASSAAKATGGVVMSAFNAMRMIVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATTACTGTGCCGCTGCAAATGATAGAATTTTATATCATCCTAGTAGCC---------GCGGGAGCAGCGATTGGATCA---GCAACA------------------------------------TTCGTTCGT---TTATTAGTTGGAACGTTAGCCATGCTTCCTTTTGGCTACCTAGGCGAA---------GCG------------------GGA------CTC---------------------------------ATG------------------------------------------------------------------AACGTG------------------TTGTTAGCC---TTTGCGCTCGGTATGGTCGGATGGGCCATTATCATCTATGAGATT---------------TTC------ATT---GGTGCCGCCAGTTCAGCTGCG---AAA------GCG---ACCGGAGGAGTAGTG---ATG---TCG---GCC---TTT---AAT---GCGATG---CGAATGATCGTACTTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLQMIEFYIILVA---AGAAIGS-AT------------FVR-LLVGTLAMLPFGYLGE---A------G--L-----------M----------------------NV------LLA-FALGMVGWAIIIYEI-----F--I-GAASSAA-K--A-TGGVV-M-S-A-F-N-AM-RMIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_JX863294 [unk-Proteo1-b] MALINA_OTU36_029_Q_env_samples_JX863294 gi|425477538|gb|JX863294| Uncultured bacterium clone MALINA OTU36 029 Q putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU36 029 Q putative proteorhodopsin mRNA, partial cds JX863294 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 07Aug2009 20m_depth Arctic Ocean marine 70.91 -128.92 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGATTACTGTGCCGCTGCAAATGATAGAATTTTATATCATCCTAGTAGCCGCGGGAGCAGCGATTGGATCAGCAACATTCGTTCGTTTATTAGTTGGAACGTTAGCCATGCTTCTTTTTGGCTACCTAGGCGAAGCGGGACTCATGAACGTGTTGCTAGCCTTTGCGCTCGGTATGGTCGGATGGGCCATTATCATCTATGAGATTCTCATTGGTGCCGCCAGTTCAGCTGCGAAAGCGACCGGGGGAGTAGTGATGTCGGCCTTTAATGCGATGCGAATGATCGTACTTGTC WLITVPLQMIEFYIILVAAGAAIGSATFVRLLVGTLAMLLFGYLGEAGLMNVLLAFALGMVGWAIIIYEILIGAASSAAKATGGVVMSAFNAMRMIVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATTACTGTGCCGCTGCAAATGATAGAATTTTATATCATCCTAGTAGCC---------GCGGGAGCAGCGATTGGATCA---GCAACA------------------------------------TTCGTTCGT---TTATTAGTTGGAACGTTAGCCATGCTTCTTTTTGGCTACCTAGGCGAA---------GCG------------------GGA------CTC---------------------------------ATG------------------------------------------------------------------AACGTG------------------TTGCTAGCC---TTTGCGCTCGGTATGGTCGGATGGGCCATTATCATCTATGAGATT---------------CTC------ATT---GGTGCCGCCAGTTCAGCTGCG---AAA------GCG---ACCGGGGGAGTAGTG---ATG---TCG---GCC---TTT---AAT---GCGATG---CGAATGATCGTACTTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLQMIEFYIILVA---AGAAIGS-AT------------FVR-LLVGTLAMLLFGYLGE---A------G--L-----------M----------------------NV------LLA-FALGMVGWAIIIYEI-----L--I-GAASSAA-K--A-TGGVV-M-S-A-F-N-AM-RMIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_JX863297 [unk-Proteo1-b] MALINA_OTU36_037_Q_env_samples_JX863297 gi|425477544|gb|JX863297| Uncultured bacterium clone MALINA OTU36 037 Q putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU36 037 Q putative proteorhodopsin mRNA, partial cds JX863297 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 07Aug2009 20m_depth Arctic Ocean marine 70.91 -128.92 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGATTACTGTGCCGCTGCAAATGATAGAATTTTATATCATCCTAGTAGCCGCGGGAGCAGCGATTGGATCAGCAACATTCGTTCGTTTATTAGTTGGAACGTTAGCCATGCTTCTTTTTGGCTACCTAGGCGAAGCGGGACTCATGAACGTGTTGTTAGCCTTTGCGCTCGGTATGGTCGGATGGGCCATTATCAGCTATGAGATTTTCATTGGTGCCGCCAGTTCAGCTGCGAAAGCGACCGGAGGAGTAGTGATGTCGGCCTTTAATGCGATGCGAATGATCGTACTTGTC WLITVPLQMIEFYIILVAAGAAIGSATFVRLLVGTLAMLLFGYLGEAGLMNVLLAFALGMVGWAIISYEIFIGAASSAAKATGGVVMSAFNAMRMIVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATTACTGTGCCGCTGCAAATGATAGAATTTTATATCATCCTAGTAGCC---------GCGGGAGCAGCGATTGGATCA---GCAACA------------------------------------TTCGTTCGT---TTATTAGTTGGAACGTTAGCCATGCTTCTTTTTGGCTACCTAGGCGAA---------GCG------------------GGA------CTC---------------------------------ATG------------------------------------------------------------------AACGTG------------------TTGTTAGCC---TTTGCGCTCGGTATGGTCGGATGGGCCATTATCAGCTATGAGATT---------------TTC------ATT---GGTGCCGCCAGTTCAGCTGCG---AAA------GCG---ACCGGAGGAGTAGTG---ATG---TCG---GCC---TTT---AAT---GCGATG---CGAATGATCGTACTTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLQMIEFYIILVA---AGAAIGS-AT------------FVR-LLVGTLAMLLFGYLGE---A------G--L-----------M----------------------NV------LLA-FALGMVGWAIISYEI-----F--I-GAASSAA-K--A-TGGVV-M-S-A-F-N-AM-RMIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_JX863295 [unk-Proteo1-b] MALINA_OTU36_032_Q_env_samples_JX863295 gi|425477540|gb|JX863295| Uncultured bacterium clone MALINA OTU36 032 Q putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU36 032 Q putative proteorhodopsin mRNA, partial cds JX863295 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 07Aug2009 20m_depth Arctic Ocean marine 70.91 -128.92 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGATTACTGTGCCGCTGCAAATGATAGAATTTTATATCATCCTAGTAGCCGCGGGAGCAGCGATTGGATCAGCAACATTCGTTCGTTTATTAGTTGGAACGTTAGCCATGCTTCTTTTTGGCTACCTAGGCGAAGCGGGACTCATGAACGTGTTGTTAGCCTTTGCGCTCGGTATGGTCGGATGGGCCATTATCATCTATGAGATTTTCATTGGTGCCGCCAGTACAGCTGCGAAAGCGACCGGAGGAGTAGTGATGTCGGCCTTCAATGCGATGCGAATGATCGTACTTGTC WLITVPLQMIEFYIILVAAGAAIGSATFVRLLVGTLAMLLFGYLGEAGLMNVLLAFALGMVGWAIIIYEIFIGAASTAAKATGGVVMSAFNAMRMIVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATTACTGTGCCGCTGCAAATGATAGAATTTTATATCATCCTAGTAGCC---------GCGGGAGCAGCGATTGGATCA---GCAACA------------------------------------TTCGTTCGT---TTATTAGTTGGAACGTTAGCCATGCTTCTTTTTGGCTACCTAGGCGAA---------GCG------------------GGA------CTC---------------------------------ATG------------------------------------------------------------------AACGTG------------------TTGTTAGCC---TTTGCGCTCGGTATGGTCGGATGGGCCATTATCATCTATGAGATT---------------TTC------ATT---GGTGCCGCCAGTACAGCTGCG---AAA------GCG---ACCGGAGGAGTAGTG---ATG---TCG---GCC---TTC---AAT---GCGATG---CGAATGATCGTACTTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLQMIEFYIILVA---AGAAIGS-AT------------FVR-LLVGTLAMLLFGYLGE---A------G--L-----------M----------------------NV------LLA-FALGMVGWAIIIYEI-----F--I-GAASTAA-K--A-TGGVV-M-S-A-F-N-AM-RMIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-EB0_35D03]_FJ560810 [unk-Proteo1-EB0_35D03] HEL87_env_samples_FJ560810 gi|223868767|gb|FJ560810| Uncultured microorganism clone HEL87 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL87 putative proteorhodopsin gene, partial cds FJ560810 [[proteorhodopsin/Proteobacterial-like cluster 1/EB0_35D03-like subcluster]] proteorhodopsin Proteobacterial-like cluster 1 EB0_35D03-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTACCTTTATTAATGATTGAATTCTTCATTATTCTTAAAGCAGTTGGTGCCAGCATCTCAACAAACTCTTTCTGGAGACTGCTAGTTGGTACTCTGGTTATGCTTATCGGTGGATTTGCAGGAGAGGCAATGCTAATCTCGGCTTCCCTAGGATTTATTATAGGAATGGTAGGTTGGGCAATCATCATCTGGGAAATCTTCGGTGGTGAAGCAAGTAAGGCTGCAGATGCTAATGCAGGAGTTAAATCTGCCTTCAACGCACTTAGACTT TVPLLMIEFFIILKAVGASISTNSFWRLLVGTLVMLIGGFAGEAMLISASLGFIIGMVGWAIIIWEIFGGEASKAADANAGVKSAFNALRL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTACCTTTATTAATGATTGAATTCTTCATTATTCTTAAAGCA---------GTTGGTGCCAGCATCTCAACA---AACTCT------------------------------------TTCTGGAGA---CTGCTAGTTGGTACTCTGGTTATGCTTATCGGTGGATTTGCAGGAGAG---------GCA------------------ATG------CTA---------------------------------ATC------------------------------------------------------------------TCGGCT------------------TCCCTAGGA---TTTATTATAGGAATGGTAGGTTGGGCAATCATCATCTGGGAAATC---------------TTC------GGT---GGTGAAGCAAGTAAGGCTGCA------------GAT---GCTAATGCAGGAGTT---AAA---TCT---GCC---TTC---AAC---GCACTT---AGACTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMIEFFIILKA---VGASIST-NS------------FWR-LLVGTLVMLIGGFAGE---A------M--L-----------I----------------------SA------SLG-FIIGMVGWAIIIWEI-----F--G-GEASKAA----D-ANAGV-K-S-A-F-N-AL-RL------------------------------------------------------------------------------------------------------------------------------------ [unk-Proteo1-EB0_35D03]_EF089397 [unk-Proteo1-EB0_35D03] EB0_35D03_genomic_EF089397 gi|119713484|gb|EF089397| Uncultured marine bacterium EB0 35D03 genomic sequence Uncultured marine bacterium EB0 35D03 genomic sequence EF089397 [[proteorhodopsin/Proteobacterial-like cluster 1/EB0_35D03-like subcluster]] proteorhodopsin Proteobacterial-like cluster 1 EB0_35D03-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:415435 genomic_DNA other 16-nov-07 #na coastal_ocean/Monterey_Bay/surface_seawater Pacific Ocean marine 36.8 -122 Proteorhodopsin photosystem gene clusters exhibit coevolutionary trends and shared ancestry among diverse marine microbial phyla McCarren,J. and DeLong,E.F. Environ. Microbiol. 9 (4), 846858 (2007) 17359257 metagenomic ATGGACGGTATGTTACAAGCTGGAGATTTTGTTGGCGTCTCATTTTGGTTAGTATCTGTTGCTATGGTTGCCTCAACAGTATTCTTCTTTTACGAGGGTATGAACGTAAATAAAGAATGGAAACTTTCAATGACAGTTGCAGGATTAGTTACATTAGTTGCTGCTATTCACTATTACTATATGAGAGATCACTGGGTTGCAACTCAAAGTTCTCCAGTAGTTTATAGATATATTGATTGGTTAATTACTGTGCCTTTATTAATGATTGAATTCTTCATCATTCTTAAAGCGGTAGGTGCAACAATTTCAACAAACTCTTTTTGGAGATTGTTGGGTGGAACACTAGTTATGCTTATTGGTGGTTTTGCAGGTGAAGCAATGCTAATCTCTGCTTCCCTAGGATTTATCATAGGTATGGTAGGTTGGGCAATTATCATCTGGGAAATCTTTGGTGGTGAAGCTAGTAAAGCAGCTGAAGCGAATGAAGGTGTTAAAACTGCATTCAATGCACTAAGAATAATTGTATTAGTAGGCTGGGCTATTTATCCACTAGGCTATATCTTCGGATATATGATGGGTAGTGTAGATGCAGGCTCTCTAAACATTCTTTATAACCTAGCAGATTTTGTTAACAAAATCTTATTTGGTTTAATTATTTGGAACGTAGCGGTAAAAGAATCTGCT MDGMLQAGDFVGVSFWLVSVAMVASTVFFFYEGMNVNKEWKLSMTVAGLVTLVAAIHYYYMRDHWVATQSSPVVYRYIDWLITVPLLMIEFFIILKAVGATISTNSFWRLLGGTLVMLIGGFAGEAMLISASLGFIIGMVGWAIIIWEIFGGEASKAAEANEGVKTAFNALRIIVLVGWAIYPLGYIFGYMMGSVDAGSLNILYNLADFVNKILFGLIIWNVAVKESA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGACGGTATGTTACAAGCTGGAGATTTTGTTGGCGTCTCATTTTGGTTAGTATCTGTTGCTATGGTTGCCTCAACAGTATTCTTCTTTTACGAGGGTATGAACGTAAATAAA---GAATGGAAACTTTCAATGACAGTTGCAGGATTAGTTACATTAGTTGCTGCTATTCACTATTACTATATGAGAGATCACTGGGTT---------------------------------------------------GCAACTCAAAGTTCTCCAGTAGTTTATAGATATATTGATTGG------------------------TTAATTACTGTGCCTTTATTAATGATTGAATTCTTCATCATTCTTAAAGCG---------GTAGGTGCAACAATTTCAACA---AACTCT------------------------------------TTTTGGAGA---TTGTTGGGTGGAACACTAGTTATGCTTATTGGTGGTTTTGCAGGTGAA---------GCA------------------ATG------CTA---------------------------------ATC------------------------------------------------------------------TCTGCT------------------TCCCTAGGA---TTTATCATAGGTATGGTAGGTTGGGCAATTATCATCTGGGAAATC---------------TTT------GGT---GGTGAAGCTAGTAAAGCAGCT------------GAA---GCGAATGAAGGTGTT---AAA---ACT---GCA---TTC---AAT---GCACTA---AGAATAATTGTATTAGTA---------------------------------------------------------------GGCTGG---------GCTATTTATCCACTAGGCTATATCTTCGGATATATG---------------------------------------ATGGGTAGTGTAGATGCAGGCTCTCTAAACATTCTTTATAACCTAGCAGATTTTGTTAACAAAATCTTATTTGGTTTAATTATTTGGAACGTAGCGGTAAAAGAATCTGCT------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------MDGMLQAGDFVGVSFWLVSVAMVASTVFFFYEGMNVNK-EWKLSMTVAGLVTLVAAIHYYYMRDHWV-----------------ATQSSPVVYRYIDW--------LITVPLLMIEFFIILKA---VGATIST-NS------------FWR-LLGGTLVMLIGGFAGE---A------M--L-----------I----------------------SA------SLG-FIIGMVGWAIIIWEI-----F--G-GEASKAA----E-ANEGV-K-T-A-F-N-AL-RIIVLV---------------------GW---AIYPLGYIFGYM-------------MGSVDAGSLNILYNLADFVNKILFGLIIWNVAVKESA---------------------------------------- [unk-Proteo1-a]_KJ926138 [unk-Proteo1-a] BOUM_OTU051_env_samples gb|KJ926138| Uncultured bacterium clone BOUM OTU051 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU051 putative proteorhodopsin gene, partial cds KJ926138 [[proteorhodopsin/Proteobacterial-like cluster 1/A subcluster]] proteorhodopsin Proteobacterial-like cluster 1 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) unknown (R105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 39.0995 5.3403333 #na #na #na #na #na GTTGACTGGATTCTAACAGTCCCTCTTCGAATGGTTGAATTTTACTTAATCTTAATAGCTGCCGGTGCTGCTGTTTCTGGTAGTTCATTCTGGAGACTTTTAGTTGGTACCTTAGTCATGATTATCGGTGGATACTTAGGTGAAGCTGGAATTATTTCAGTATTACTTGGCTTTATTGTCGGTATGATTGGATGGGCAGTAATTATTTGGGAAATCTTCCGAGGTGAGGCTAGTCAAGCTGCCGCTTCAAATGAATCAGTGTCATCAGCATTTAATGCAATGAGATTAGTTGTACTTGTTGGCTGGGCAATCTAC VDWILTVPLRMVEFYLILIAAGAAVSGSSFWRLLVGTLVMIIGGYLGEAGIISVLLGFIVGMIGWAVIIWEIFRGEASQAAASNESVSSAFNAMRLVVLVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGACTGG------------------------ATTCTAACAGTCCCTCTTCGAATGGTTGAATTTTACTTAATCTTAATAGCT---------GCCGGTGCTGCTGTTTCTGGT---AGTTCA------------------------------------TTCTGGAGA---CTTTTAGTTGGTACCTTAGTCATGATTATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------ATT---------------------------------ATT------------------------------------------------------------------TCAGTA------------------TTACTTGGC---TTTATTGTCGGTATGATTGGATGGGCAGTAATTATTTGGGAAATC---------------TTC------CGA---GGTGAGGCTAGTCAAGCTGCC------------GCT---TCAAATGAATCAGTG---TCA---TCA---GCA---TTT---AAT---GCAATG---AGATTAGTTGTACTTGTT---------------------------------------------------------------GGCTGG---------GCAATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------ILTVPLRMVEFYLILIA---AGAAVSG-SS------------FWR-LLVGTLVMIIGGYLGE---A------G--I-----------I----------------------SV------LLG-FIVGMIGWAVIIWEI-----F--R-GEASQAA----A-SNESV-S-S-A-F-N-AM-RLVVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-Proteo1-a]_KJ926140 [unk-Proteo1-a] BOUM_OTU053_env_samples gb|KJ926140| Uncultured bacterium clone BOUM OTU053 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU053 putative proteorhodopsin gene, partial cds KJ926140 [[proteorhodopsin/Proteobacterial-like cluster 1/A subcluster]] proteorhodopsin Proteobacterial-like cluster 1 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 38.6308 7.9097 #na #na #na #na #na GTAGACTGGATACTAACTGTACCACTTCAAATGGTTGAATTCTTTTTAATTCTAGTTGCTGCCGGAGCAGCTGTATCAAGTGGTGCTTTCTACAGATTGCTCATCGGTACACTTGTTATGATTGTTGGTGGATATCTTGGAGAAGCAGGTCATATTACGGTATTACTTGGTTTCATCATTGGTATGATCGGTTGGGCTGTAATCATTTGGGAAATTTTCCGAGGTGGAGCAAGTCAGGCTGCTACAACTAAAGAATCAGTAACATCTGCATTTAATGCAATGAGATTAATTGTATTAGTTGGATGGGCAATCTAC VDWILTVPLQMVEFFLILVAAGAAVSSGAFYRLLIGTLVMIVGGYLGEAGHITVLLGFIIGMIGWAVIIWEIFRGGASQAATTKESVTSAFNAMRLIVLVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGACTGG------------------------ATACTAACTGTACCACTTCAAATGGTTGAATTCTTTTTAATTCTAGTTGCT---------GCCGGAGCAGCTGTATCAAGT---GGTGCT------------------------------------TTCTACAGA---TTGCTCATCGGTACACTTGTTATGATTGTTGGTGGATATCTTGGAGAA---------GCA------------------GGT------CAT---------------------------------ATT------------------------------------------------------------------ACGGTA------------------TTACTTGGT---TTCATCATTGGTATGATCGGTTGGGCTGTAATCATTTGGGAAATT---------------TTC------CGA---GGTGGAGCAAGTCAGGCTGCT------------ACA---ACTAAAGAATCAGTA---ACA---TCT---GCA---TTT---AAT---GCAATG---AGATTAATTGTATTAGTT---------------------------------------------------------------GGATGG---------GCAATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------ILTVPLQMVEFFLILVA---AGAAVSS-GA------------FYR-LLIGTLVMIVGGYLGE---A------G--H-----------I----------------------TV------LLG-FIIGMIGWAVIIWEI-----F--R-GGASQAA----T-TKESV-T-S-A-F-N-AM-RLIVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-Proteo1-a]_EU915775 [unk-Proteo1-a] PF97518_env_samples_EU915775 gi|229358432|gb|EU915775| Uncultured microorganism clone PF97518 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF97518 putative proteorhodopsin gene, partial cds EU915775 [[proteorhodopsin/Proteobacterial-like cluster 1/A subcluster]] proteorhodopsin Proteobacterial-like cluster 1 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGTCTTCTTCTTTTATGAAGGAATGAGGGTTTCTGGAAAATGGAGAACATCAATGGTGGTAGCAGGACTAATAACATTTATTGCTGCTGTTCACTACATGTACATGAGAGATTTTTGGGTAGAAATGGGAGAGTCTCCTACAGTATACCGTTATATTGACTGGGTTTTAACCGTTCCACTTCAGATGGTCGAATTCTATCTAATTCTTATAGCCGCTGGAGCAGCAGTATCAGGAGGAGCTTTTTGGAGACTTCTTGTAGGTACTTTGGTCATGGTAATAGGTGGTTATCTTGGAGAAGCTGGAATGATTTCTGTTTTACTAGGATTTATCATTGGAATGATTGGTTGGGCTGTCATCATCTGGGAAATATTCAGAGGAGAAGCAAGTCAGGCAGCTGCATCAAACGAATCAGTTTCTTCAGCATTTAATGCAATGAGATTGATTGTACTTATAGGGTGGGCGATATAT MVAATVFFFYEGMRVSGKWRTSMVVAGLITFIAAVHYMYMRDFWVEMGESPTVYRYIDWVLTVPLQMVEFYLILIAAGAAVSGGAFWRLLVGTLVMVIGGYLGEAGMISVLLGFIIGMIGWAVIIWEIFRGEASQAAASNESVSSAFNAMRLIVLIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTCTTCTTCTTTTATGAAGGAATGAGGGTTTCTGGA---AAATGGAGAACATCAATGGTGGTAGCAGGACTAATAACATTTATTGCTGCTGTTCACTACATGTACATGAGAGATTTTTGGGTA---------------------------------------------------GAAATGGGAGAGTCTCCTACAGTATACCGTTATATTGACTGG------------------------GTTTTAACCGTTCCACTTCAGATGGTCGAATTCTATCTAATTCTTATAGCC---------GCTGGAGCAGCAGTATCAGGA---GGAGCT------------------------------------TTTTGGAGA---CTTCTTGTAGGTACTTTGGTCATGGTAATAGGTGGTTATCTTGGAGAA---------GCT------------------GGA------ATG---------------------------------ATT------------------------------------------------------------------TCTGTT------------------TTACTAGGA---TTTATCATTGGAATGATTGGTTGGGCTGTCATCATCTGGGAAATA---------------TTC------AGA---GGAGAAGCAAGTCAGGCAGCT------------GCA---TCAAACGAATCAGTT---TCT---TCA---GCA---TTT---AAT---GCAATG---AGATTGATTGTACTTATA---------------------------------------------------------------GGGTGG---------GCGATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFYEGMRVSG-KWRTSMVVAGLITFIAAVHYMYMRDFWV-----------------EMGESPTVYRYIDW--------VLTVPLQMVEFYLILIA---AGAAVSG-GA------------FWR-LLVGTLVMVIGGYLGE---A------G--M-----------I----------------------SV------LLG-FIIGMIGWAVIIWEI-----F--R-GEASQAA----A-SNESV-S-S-A-F-N-AM-RLIVLI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-Proteo1-a]_KJ926139 [unk-Proteo1-a] BOUM_OTU052_env_samples gb|KJ926139| Uncultured bacterium clone BOUM OTU052 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU052 putative proteorhodopsin gene, partial cds KJ926139 [[proteorhodopsin/Proteobacterial-like cluster 1/A subcluster]] proteorhodopsin Proteobacterial-like cluster 1 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 33.709667 32.644667 #na #na #na #na #na ATTGATTGGGTATTAACGGTTCCATTGCAAATGGTTGAGTTTTATTTGATTTTAATCGCTGCCGGAGCTGCTGTATCAGGAGCATCTTTTTGGAGACTGCTCGTTGGTACTTTGGTTATGGTTGTAGGTGGTTATCTTGGAGAGGCAGGAATGATTCCTGTACTATTAGGATTTATCATAGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATTTTCAGAGGAGAGGCAAGTCAAGCAGCATCTTCAAACCAATCTGTTTCTTCTGCTTTCAATGCAATGAGATTAATTGTTTTAGTAGGGTGGGCCATCTAT IDWVLTVPLQMVEFYLILIAAGAAVSGASFWRLLVGTLVMVVGGYLGEAGMIPVLLGFIIGMIGWAVIIWEIFRGEASQAASSNQSVSSAFNAMRLIVLVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGATTGG------------------------GTATTAACGGTTCCATTGCAAATGGTTGAGTTTTATTTGATTTTAATCGCT---------GCCGGAGCTGCTGTATCAGGA---GCATCT------------------------------------TTTTGGAGA---CTGCTCGTTGGTACTTTGGTTATGGTTGTAGGTGGTTATCTTGGAGAG---------GCA------------------GGA------ATG---------------------------------ATT------------------------------------------------------------------CCTGTA------------------CTATTAGGA---TTTATCATAGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATT---------------TTC------AGA---GGAGAGGCAAGTCAAGCAGCA------------TCT---TCAAACCAATCTGTT---TCT---TCT---GCT---TTC---AAT---GCAATG---AGATTAATTGTTTTAGTA---------------------------------------------------------------GGGTGG---------GCCATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDW--------VLTVPLQMVEFYLILIA---AGAAVSG-AS------------FWR-LLVGTLVMVVGGYLGE---A------G--M-----------I----------------------PV------LLG-FIIGMIGWAVIIWEI-----F--R-GEASQAA----S-SNQSV-S-S-A-F-N-AM-RLIVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203417 [I-Planctomycetes-b] MedHO102G7_env_samples_DQ203417 gi|77547282|gb|DQ203417| Uncultured bacterium clone MedHO102G7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102G7 predicted proteorhodopsin gene, partial cds DQ203417 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTAATTACAGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGGGAGACACAAATCCTTGGTGTTTCAGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGCGGTAACATTGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTCACTGTAGGTTGGGCCATTTATCCA RYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQILGVSEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNIASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACAGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGGGAG---------ACA------------------CAA------ATC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGC---GGTAACATTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTCACTGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--I-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNIAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203733 [I-Planctomycetes-b] medHO155H7_env_samples_DQ203733 gi|77547914|gb|DQ203733| Uncultured bacterium clone medHO155H7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155H7 predicted proteorhodopsin gene, partial cds DQ203733 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTAATTACAGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGGGAGACACAAATCCTTGGTGTTTCAGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGCGGTAACATTGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTCACTGTAGGTTGGGCCATTTATCCA RYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQILGVSEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNIASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACAGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGGGAG---------ACA------------------CAA------ATC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGC---GGTAACATTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTCACTGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--I-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNIAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ339241 [I-Planctomycetes-b] clone_S-SOM-H10_DQ339241 gi|85681459|gb|DQ339241| Uncultured bacterium clone S-SOM-H10 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-H10 predicted proteorhodopsin gene, partial cds. DQ339241 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTAATTACAGTCCCTCTCCAAACCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAGACACAAATCCTTGGTGTTTCAGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGCGGTAACATTGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTCACTGTAGGTTGGGCCATTTATCCA RYIDWLITVPLQTVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQILGVSEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNIASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACAGTCCCTCTCCAAACCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAG---------ACA------------------CAA------ATC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGC---GGTAACATTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTCACTGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQTVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--I-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNIAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203309 [I-Planctomycetes-b] SS114a80C1_env_samples_DQ203309 gi|77547066|gb|DQ203309| Uncultured bacterium clone SS114a80C1 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a80C1 predicted proteorhodopsin gene, partial cds DQ203309 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_80m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_2003 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTATATTGACTGGCTAATTACAGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGGGAGACACAAATCCTTGGTGTTTCAGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGCGGTAACATTGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTCACTGTAGGTTGGGCCATCTCTCCA RYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQILGVSEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNIASQNAFKTIRLIVTVGWAISP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTATATTGACTGG------------------------CTAATTACAGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGGGAG---------ACA------------------CAA------ATC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGC---GGTAACATTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTCACTGTA---------------------------------------------------------------GGTTGG---------GCCATCTCTCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--I-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNIAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AISP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203640 [I-Planctomycetes-b] medHO120F9_env_samples_DQ203640 gi|77547728|gb|DQ203640| Uncultured bacterium clone medHO120F9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120F9 predicted proteorhodopsin gene, partial cds DQ203640 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGACTGGCTAATTACAGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGGGAGACACAAATCCTTGGTGTTTCAGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGCGGTAACATTGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTCACTGTAGGTTGGGCCATCTACCCA RYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQILGVSEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNIASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGACTGG------------------------CTAATTACAGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGGGAG---------ACA------------------CAA------ATC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGC---GGTAACATTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTCACTGTA---------------------------------------------------------------GGTTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--I-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNIAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203734 [I-Planctomycetes-b] medHO155H9_env_samples_DQ203734 gi|77547916|gb|DQ203734| Uncultured bacterium clone medHO155H9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155H9 predicted proteorhodopsin gene, partial cds DQ203734 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGACTGGCTAATTACAGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGCTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGGGAGACACAAATCCTTGGTGTTTCAGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGCGGTAACATTGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTCACTGTAGGTTGGGCCATTTATCCA RYIDWLITVPLQIVEFYLILAAVTAVSVRVFWKLLVASLVMLVGGYLGETQILGVSEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNIASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGACTGG------------------------CTAATTACAGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGCTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGGGAG---------ACA------------------CAA------ATC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGC---GGTAACATTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTCACTGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TAVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--I-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNIAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203334 [I-Planctomycetes-b] SS114a80G5_env_samples_DQ203334 gi|77547116|gb|DQ203334| Uncultured bacterium clone SS114a80G5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a80G5 predicted proteorhodopsin gene, partial cds DQ203334 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_80m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_2003 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGACTGGCTAATTACAGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGGGAGACACAAATCCTTGGTGTTTCAGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGCGGTAACCTTGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTCACTGTAGGGTGGGCCATTTATCCA RYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQILGVSEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNLASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGACTGG------------------------CTAATTACAGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGGGAG---------ACA------------------CAA------ATC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGC---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTCACTGTA---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--I-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203790 [I-Planctomycetes-b] SS114a0H4_env_samples_DQ203790 gi|77548028|gb|DQ203790| Uncultured bacterium clone SS114a0H4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0H4 predicted proteorhodopsin gene, partial cds DQ203790 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGACTGGCTAATTACAGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAGACACAAATCCTTGGTGTTCCAGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGCGGTAACATTGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTCACTGTAGGGTGGGCCATATACCCA RYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQILGVPEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNIASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGACTGG------------------------CTAATTACAGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAG---------ACA------------------CAA------ATC---------------------------------CTTGGT---GTT---------------------------------------------------------CCAGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGC---GGTAACATTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTCACTGTA---------------------------------------------------------------GGGTGG---------GCCATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--I-----------LG-V-------------------PE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNIAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203475 [I-Planctomycetes-b] medHO10F3_env_samples_DQ203475 gi|77547398|gb|DQ203475| Uncultured bacterium clone medHO10F3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10F3 predicted proteorhodopsin gene, partial cds DQ203475 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGATTGGCTAATTACAGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTATTTAGGGGAGACACAAATCCTTGGTGTTTCAGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGCGGTAACATTGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTCACTGTAGGTTGGGCCATATATCCA SYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQILGVSEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNIASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGATTGG------------------------CTAATTACAGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTATTTAGGGGAG---------ACA------------------CAA------ATC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGC---GGTAACATTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTCACTGTA---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--I-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNIAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203525 [I-Planctomycetes-b] MedHO1202C9_env_samples_DQ203525 gi|77547498|gb|DQ203525| Uncultured bacterium clone MedHO1202C9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202C9 predicted proteorhodopsin gene, partial cds DQ203525 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGATTGGCTAATTACAGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGGGAGACACAAATCCTCGGTGTTTCAGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGCGGTAACATTGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTCACTGTAGGGTGGGCCATATATCCA SYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQILGVSEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNIASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGATTGG------------------------CTAATTACAGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGGGAG---------ACA------------------CAA------ATC---------------------------------CTCGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGC---GGTAACATTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTCACTGTA---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--I-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNIAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203850 [I-Planctomycetes-b] SS114a40H4_env_samples_DQ203850 gi|77548148|gb|DQ203850| Uncultured bacterium clone SS114a40H4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40H4 predicted proteorhodopsin gene, partial cds DQ203850 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGACTGGCTAATTACAGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTCGTCATGCTAGTGGGTGGTTACTTAGGGGAGACACAAATCCTTGGTGTTTCAGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTGCAGGTGAAGCCTCCAAGCTTAACGCAAACAGCGGTAACATTGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTCACTGTAGGATGGGCAATCTATCCA SYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQILGVSEMVGFIIGMAGWLYIIYEIFAGEASKLNANSGNIASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGACTGG------------------------CTAATTACAGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTCGTCATGCTAGTGGGTGGTTACTTAGGGGAG---------ACA------------------CAA------ATC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------GCA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGC---GGTAACATTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTCACTGTA---------------------------------------------------------------GGATGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--I-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--A-GEASKLNAN--S-GNIAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203328 [I-Planctomycetes-b] SS114a80F10_env_samples_DQ203328 gi|77547104|gb|DQ203328| Uncultured bacterium clone SS114a80F10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a80F10 predicted proteorhodopsin gene, partial cds DQ203328 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_80m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_2003 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGATTGGCTAATTACAGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTCGTCATGCTAGTTGGTGGTTACTTAGGGGAGACACAAATCCTTGGTGTTTCAGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTGCAGGTGAAGCCTCCAAGCTTAACGCAAACAGCGGTAACATTGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTCACTGTAGGGTGGGCCATTTATCCA SYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQILGVSEMVGFIIGMAGWLYIIYEIFAGEASKLNANSGNIASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGATTGG------------------------CTAATTACAGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTCGTCATGCTAGTTGGTGGTTACTTAGGGGAG---------ACA------------------CAA------ATC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------GCA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGC---GGTAACATTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTCACTGTA---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--I-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--A-GEASKLNAN--S-GNIAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ339163 [I-Planctomycetes-b] clone_S-SOM-A4_DQ339163 gi|85681303|gb|DQ339163| Uncultured bacterium clone S-SOM-A4 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-A4 predicted proteorhodopsin gene, partial cds. DQ339163 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGCTACATAGACTGGCTAATTACAGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGGGAGACACAAATCCTTGGTGTTTCAGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTGCAGGTGAAGCCTCCAAGCTTAACGCAAACAGCGGTAACCTTGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTCACTGTAGGGTGGGCCATTTATCCA SYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQILGVSEMVGFIIGMAGWLYIIYEIFAGEASKLNANSGNLASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATAGACTGG------------------------CTAATTACAGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGGGAG---------ACA------------------CAA------ATC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------GCA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGC---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTCACTGTA---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--I-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--A-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203374 [I-Planctomycetes-b] MedHO102D1_env_samples_DQ203374 gi|77547196|gb|DQ203374| Uncultured bacterium clone MedHO102D1 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102D1 predicted proteorhodopsin gene, partial cds DQ203374 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATAGATTGGCTAATTACAGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGGGAGACACAAATCCTTGGTGTTTCAGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGCGGTAACATTGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTCACTGTAGGGTGGGCAATTTATCCA SYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQILGVSEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNIASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATAGATTGG------------------------CTAATTACAGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGGGAG---------ACA------------------CAA------ATC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGC---GGTAACATTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTCACTGTA---------------------------------------------------------------GGGTGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--I-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNIAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203343 [I-Planctomycetes-b] MedHO102A10_env_samples_DQ203343 gi|77547134|gb|DQ203343| Uncultured bacterium clone MedHO102A10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102A10 predicted proteorhodopsin gene, partial cds DQ203343 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGATTGGCTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGGGAGACACAAATCCTTGGTGTTTCAGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGCGGTAACATTGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTCACTGTAGGCTGGGCAATATATCCA SYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQILGVSEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNIASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGATTGG------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGGGAG---------ACA------------------CAA------ATC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGC---GGTAACATTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTCACTGTA---------------------------------------------------------------GGCTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--I-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNIAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203339 [I-Planctomycetes-b] SS114a80H5_env_samples_DQ203339 gi|77547126|gb|DQ203339| Uncultured bacterium clone SS114a80H5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a80H5 predicted proteorhodopsin gene, partial cds DQ203339 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_80m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_2003 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGATTGGCTAATTACAGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGGGAGACACAAATCCTTGGTGTTTCAGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGTGGTAACCTTGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTCACTGTAGGGTGGGCCATCTATCCA SYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQILGVSEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNLASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGATTGG------------------------CTAATTACAGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGGGAG---------ACA------------------CAA------ATC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTCACTGTA---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--I-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203685 [I-Planctomycetes-b] medHO155C4_env_samples_DQ203685 gi|77547818|gb|DQ203685| Uncultured bacterium clone medHO155C4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155C4 predicted proteorhodopsin gene, partial cds DQ203685 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGACTGGCTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAGACTCAAGTCCTTGGTGTTTCAGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCCATGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGTGGTAACCTTGCCTCTCAGAATGCATTCAAGACGATTCGTCTGATTGTCACTGTAGGGTGGGCAATCTATCCA SYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQVLGVSEMVGFIIGMAGWLYIIHEIFKGEASKLNANSGNLASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGACTGG------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCCATGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCA---TTC---AAG---ACGATT---CGTCTGATTGTCACTGTA---------------------------------------------------------------GGGTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIHEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203654 [I-Planctomycetes-b] medHO120H4_env_samples_DQ203654 gi|77547756|gb|DQ203654| Uncultured bacterium clone medHO120H4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120H4 predicted proteorhodopsin gene, partial cds DQ203654 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTATATTGACTGGCTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAGACTCAAGTCCTTGGTGTTTCAGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGTGGTAACCTTGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTCACTGTAGGTTGGGCAATCTATCCA RYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQVLGVSEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNLASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTATATTGACTGG------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTCACTGTA---------------------------------------------------------------GGTTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203561 [I-Planctomycetes-b] MedHO1202G12_env_samples_DQ203561 gi|77547570|gb|DQ203561| Uncultured bacterium clone MedHO1202G12 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202G12 predicted proteorhodopsin gene, partial cds DQ203561 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGACTGGCTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAGACTCAAGTCCTTGGTGTTTCAGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGTGGTAACCTTGCCTCTCAGAATGCTTTCAAGACGATTCGCCTGATTGTCACTGTAGGTTGGGCAATATATCCA SYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQVLGVSEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNLASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGACTGG------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGCCTGATTGTCACTGTA---------------------------------------------------------------GGTTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203532 [I-Planctomycetes-b] MedHO1202D5_env_samples_DQ203532 gi|77547512|gb|DQ203532| Uncultured bacterium clone MedHO1202D5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202D5 predicted proteorhodopsin gene, partial cds DQ203532 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTATTGGGTGGTTACCTAGGCGAGACTCAAGTTCTTGGTGTTTCTGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTGCAGGTGAAGCCTCCAAGCTTAACGCAAACAGTGGTAACCTTGCCTCTCAGAATGCTTTCAAGACAATTCGTCTGATTGTTACTGTAGGGTGGGCCATCTATCCA RYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLLGGYLGETQVLGVSEMVGFIIGMAGWLYIIYEIFAGEASKLNANSGNLASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTATTGGGTGGTTACCTAGGCGAG---------ACT------------------CAA------GTT---------------------------------CTTGGT---GTT---------------------------------------------------------TCTGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------GCA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACAATT---CGTCTGATTGTTACTGTA---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLLGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--A-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203680 [I-Planctomycetes-b] medHO155B9_env_samples_DQ203680 gi|77547808|gb|DQ203680| Uncultured bacterium clone medHO155B9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155B9 predicted proteorhodopsin gene, partial cds DQ203680 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTATTGGGTGGTTACCTAGGCGAGACTCAAGTTCTTGGTGTTTCTGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTGCAGGTGAAGCCTCCAAGCTTAACGCAAACAGTGGTAACCTTGCCTCTCAGAATGCTTTCAAGACAATTCGTCTGATTGTTACTGTAGGTTGGGCCATTTACCCA RYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLLGGYLGETQVLGVSEMVGFIIGMAGWLYIIYEIFAGEASKLNANSGNLASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTATTGGGTGGTTACCTAGGCGAG---------ACT------------------CAA------GTT---------------------------------CTTGGT---GTT---------------------------------------------------------TCTGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------GCA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACAATT---CGTCTGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLLGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--A-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203506 [I-Planctomycetes-b] MedHO1202B12_env_samples_DQ203506 gi|77547460|gb|DQ203506| Uncultured bacterium clone MedHO1202B12 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202B12 predicted proteorhodopsin gene, partial cds DQ203506 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGATTGGCTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTATTGGGTGGTTACCTAGGCGAGACTCAAGTTCTTGGTGTTTCTGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTGCAGGTGAAGCCTCCAAGCTTAACGCAAACAGTGGTAACCTTGCCTCTCAGAATGCTTTCAAGACAATTCGTCTGATTGTTACTGTAGGGTGGGCCATCTATCCA SYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLLGGYLGETQVLGVSEMVGFIIGMAGWLYIIYEIFAGEASKLNANSGNLASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGATTGG------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTATTGGGTGGTTACCTAGGCGAG---------ACT------------------CAA------GTT---------------------------------CTTGGT---GTT---------------------------------------------------------TCTGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------GCA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACAATT---CGTCTGATTGTTACTGTA---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLLGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--A-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203425 [I-Planctomycetes-b] MedHO102H4_env_samples_DQ203425 gi|77547298|gb|DQ203425| Uncultured bacterium clone MedHO102H4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102H4 predicted proteorhodopsin gene, partial cds DQ203425 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGACTGGCTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTATTGGGTGGTTACTTAGGCGAGACTCAAGTTCTTGGTGTTTCTGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTGCAGGTGAAGCCTCCAAGCTTAACGCAAACAGTGGTAACCTTGCCTCTCAGAATGCTTTCAAGACAATTCGTCCGATTGTTACTGTAGGTTGGGCAATCTATCCA RYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLLGGYLGETQVLGVSEMVGFIIGMAGWLYIIYEIFAGEASKLNANSGNLASQNAFKTIRPIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGACTGG------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTATTGGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTT---------------------------------CTTGGT---GTT---------------------------------------------------------TCTGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------GCA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACAATT---CGTCCGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLLGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--A-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RPIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203546 [I-Planctomycetes-b] MedHO1202E7_env_samples_DQ203546 gi|77547540|gb|DQ203546| Uncultured bacterium clone MedHO1202E7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202E7 predicted proteorhodopsin gene, partial cds DQ203546 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGACTGGCTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTATTGGGTGGTTACTTAGGCGAGACTCAAGTTCTTGGTGTTTCTGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTGCAGGTGAAGCCTCCAAGCTTAACGCAAACAGTGGTAACCTTGCCTCTCAGAATGCTTTCAAGACAATTCGTCTGATTGTTACTGTAGGTTGGGCCATTTATCCA SYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLLGGYLGETQVLGVSEMVGFIIGMAGWLYIIYEIFAGEASKLNANSGNLASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGACTGG------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTATTGGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTT---------------------------------CTTGGT---GTT---------------------------------------------------------TCTGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------GCA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACAATT---CGTCTGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLLGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--A-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203316 [I-Planctomycetes-b] SS114a80D10_env_samples_DQ203316 gi|77547080|gb|DQ203316| Uncultured bacterium clone SS114a80D10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a80D10 predicted proteorhodopsin gene, partial cds DQ203316 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_80m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_2003 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGACTGGCTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTTGCATCACTTGTCATGCTATTGGGTGGTTACTTAGGCGAGACTCAAGTTCTTGGTGTTTCTGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGCGAAGCCTCCAAGCTTAACGCAAACAGTGGTAACCTTGCCTCTCAGAATGCTTTCAAGACAATTCGTCTGATTGTTACTGTAGGTTGGGCCATATATCCA SYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLLGGYLGETQVLGVSEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNLASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGACTGG------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTTGCATCACTTGTCATGCTATTGGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTT---------------------------------CTTGGT---GTT---------------------------------------------------------TCTGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGCGAAGCCTCCAAGCTTAACGCAAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACAATT---CGTCTGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLLGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ339200 [I-Planctomycetes-b] clone_S-SOM-D6_DQ339200 gi|85681377|gb|DQ339200| Uncultured bacterium clone S-SOM-D6 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-D6 predicted proteorhodopsin gene, partial cds. DQ339200 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTTGCATCACTTGTCATGCTATTGGGTGGATACTTAGGCGAGACTCAAGTTCTTGGTGTTTCTGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGCGAAGCCTCCAAGCTTAACGCAAACAGTGGTAACCTTGCCTCTCAGAATGCTTTCAAGACAATTCGTCTGATTGTTACTGTAGGGTGGGCCATATATCCA RYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLLGGYLGETQVLGVSEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNLASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTTGCATCACTTGTCATGCTATTGGGTGGATACTTAGGCGAG---------ACT------------------CAA------GTT---------------------------------CTTGGT---GTT---------------------------------------------------------TCTGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGCGAAGCCTCCAAGCTTAACGCAAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACAATT---CGTCTGATTGTTACTGTA---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLLGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203636 [I-Planctomycetes-b] medHO120F5_env_samples_DQ203636 gi|77547720|gb|DQ203636| Uncultured bacterium clone medHO120F5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120F5 predicted proteorhodopsin gene, partial cds DQ203636 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGACTGGCTAATTACTGTCCCTCTCCAAATCGTAGAATTCTACTTAATCCTTGCTGCAGTCACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAGACTCAAGTCCTTGGTGTTTCAGAAATGGTTGGTTTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGCGGTAACCTAGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTTACTGTAGGTTGGGCCATCTATCCA SYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQVLGVSEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNLASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGACTGG------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAATTCTACTTAATCCTTGCTGCA---------GTC---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGT---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGC---GGTAACCTAGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203726 [I-Planctomycetes-b] medHO155G7_env_samples_DQ203726 gi|77547900|gb|DQ203726| Uncultured bacterium clone medHO155G7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155G7 predicted proteorhodopsin gene, partial cds DQ203726 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGACTGGCTAATTACTGTCCCTCTCCAAATCGTAGAATTCTACTTAATCCTTGCTGCAGTCACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAGACTCAAGTCCTTGGTGTTTCAGAAATGGTTGGTTTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGCGGTAACCTAGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTTACTGTAGGTTGGGCCATATATCCA SYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQVLGVSEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNLASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGACTGG------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAATTCTACTTAATCCTTGCTGCA---------GTC---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGT---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGC---GGTAACCTAGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203463 [I-Planctomycetes-b] medHO10D9_env_samples_DQ203463 gi|77547374|gb|DQ203463| Uncultured bacterium clone medHO10D9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10D9 predicted proteorhodopsin gene, partial cds DQ203463 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGATTGGCTAATTACTGTACCTCTCCAAATCGTAGAATTCTACTTAATCCTTGCTGCAGTCACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAGACTCAAGTCCTTGGTGTTTCAGAAATGGTTGGTTTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGCGGTAACCTAGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTTACTGTAGGTTGGGCCATTTACCCA SYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQVLGVSEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNLASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGATTGG------------------------CTAATTACTGTACCTCTCCAAATCGTAGAATTCTACTTAATCCTTGCTGCA---------GTC---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGT---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGC---GGTAACCTAGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203558 [I-Planctomycetes-b] MedHO1202G1_env_samples_DQ203558 gi|77547564|gb|DQ203558| Uncultured bacterium clone MedHO1202G1 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202G1 predicted proteorhodopsin gene, partial cds DQ203558 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGACTGGCTAATTACTGTCCCTCTCCAAATCGTAGAATTCTACTTAATCCTTGCTGCAGTCACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAGACTCAAGTCCTTGGTGTTTCAGAAATGGTTGGTTTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGCGGTAACCTAGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTTACTGTAGGTTGGGCCATATATCCA RYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQVLGVSEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNLASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGACTGG------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAATTCTACTTAATCCTTGCTGCA---------GTC---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGT---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGC---GGTAACCTAGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ339192 [I-Planctomycetes-b] clone_S-SOM-D1_DQ339192 gi|85681361|gb|DQ339192| Uncultured bacterium clone S-SOM-D1 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-D1 predicted proteorhodopsin gene, partial cds. DQ339192 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTAATTACTGTCCCTCTCCAAATCGTAGAATTCTACTTAATCCTTGCTGCAGTCACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAGACTCAAGTCCTTGGTGTTTCAGAAATGGTTGGTTTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGCGGTAACCTAGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTTACTGTAGGGTGGGCAATTTATCCA RYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQVLGVSEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNLASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAATTCTACTTAATCCTTGCTGCA---------GTC---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGT---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGC---GGTAACCTAGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTTACTGTA---------------------------------------------------------------GGGTGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203649 [I-Planctomycetes-b] medHO120G7_env_samples_DQ203649 gi|77547746|gb|DQ203649| Uncultured bacterium clone medHO120G7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120G7 predicted proteorhodopsin gene, partial cds DQ203649 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGACTGGCTAATTACTGTCCCTCTCCAAATCGTAGAATTCTACTTAATCCTTGCTGCAGTCACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAGACTCAAGTCCTTGGTGTTTCAGAAATGGTTGGTTTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGCGGTAACCTAGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTTACTGTAGGTTGGGCAATATATCCA SYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQVLGVSEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNLASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGACTGG------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAATTCTACTTAATCCTTGCTGCA---------GTC---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGT---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGC---GGTAACCTAGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203707 [I-Planctomycetes-b] medHO155E6_env_samples_DQ203707 gi|77547862|gb|DQ203707| Uncultured bacterium clone medHO155E6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155E6 predicted proteorhodopsin gene, partial cds DQ203707 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTATATTGATTGGCTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAGACTCAAGTCCTTGGTGTTTCAGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGTGGTAACCTTGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTCACTGTAGGTTGGGCCATTTACCCA RYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQVLGVSEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNLASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTATATTGATTGG------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTCACTGTA---------------------------------------------------------------GGTTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203723 [I-Planctomycetes-b] medHO155G3_env_samples_DQ203723 gi|77547894|gb|DQ203723| Uncultured bacterium clone medHO155G3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155G3 predicted proteorhodopsin gene, partial cds DQ203723 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTATATTGACTGGCTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAGACTCAAGTCCTTGGTGTTTCAGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGTGGTAACCTTGCCACTCAGAATGCTTTCAAGACGATTCGTCTGATTGTCACTGTAGGTTGGGCCATTTACCCA RYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQVLGVSEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNLATQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTATATTGACTGG------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGT---GGTAACCTTGCCACT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTCACTGTA---------------------------------------------------------------GGTTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAT-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203397 [I-Planctomycetes-b] MedHO102E9_env_samples_DQ203397 gi|77547242|gb|DQ203397| Uncultured bacterium clone MedHO102E9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102E9 predicted proteorhodopsin gene, partial cds DQ203397 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGATTGGCTAATTACTGTCCCTTTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAGACTCAAGTCCTTGGTGTTTCAGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGTGGTAACCTTGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTCACTGTAGGTTGGGCCATTTATCCA SYIDWLITVPFQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQVLGVSEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNLASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGATTGG------------------------CTAATTACTGTCCCTTTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTCACTGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPFQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203507 [I-Planctomycetes-b] MedHO1202B2_env_samples_DQ203507 gi|77547462|gb|DQ203507| Uncultured bacterium clone MedHO1202B2 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202B2 predicted proteorhodopsin gene, partial cds DQ203507 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGACTGGCTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTAACCGTTGTTAGTGTGCGCGTATTCTGGAAACTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAGACTCAAGTCCTTGGTGTTTCAGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGTGGTAACCTTGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTCACTGTAGGTTGGGCCATTTATCCA RYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQVLGVSEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNLASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGACTGG------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTA---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAA---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTCACTGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203721 [I-Planctomycetes-b] medHO155G12_env_samples_DQ203721 gi|77547890|gb|DQ203721| Uncultured bacterium clone medHO155G12 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155G12 predicted proteorhodopsin gene, partial cds DQ203721 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGACTGGCTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTAACCGTTGTTAGTGTGCGCGTATTCTGGAAACTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAGACTCAAGTCCTTGGTGTTTCAGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGTGGTAACCTTGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTCACTGTAGGTTGGGCCATCTATCCA RYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQVLGVSEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNLASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGACTGG------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTA---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAA---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTCACTGTA---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203462 [I-Planctomycetes-b] medHO10D8_env_samples_DQ203462 gi|77547372|gb|DQ203462| Uncultured bacterium clone medHO10D8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10D8 predicted proteorhodopsin gene, partial cds DQ203462 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGACTGGCTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGCTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAGACTCAAGTCCTTGGTGTTTCAGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGTGGTAACCTTGCCTCTCAGAATGCTTTCAAGGCGATTCGTCTGATTGTCACTGTAGGTTGGGCCATTTATCCA RYIDWLITVPLQIVEFYLILAAVTAVSVRVFWKLLVASLVMLVGGYLGETQVLGVSEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNLASQNAFKAIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGACTGG------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGCTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---GCGATT---CGTCTGATTGTCACTGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TAVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-AI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203665 [I-Planctomycetes-b] medHO155A3_env_samples_DQ203665 gi|77547778|gb|DQ203665| Uncultured bacterium clone medHO155A3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155A3 predicted proteorhodopsin gene, partial cds DQ203665 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGACTGGCTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGATACTTAGGCGAGACTCAAGTCCTTGGTGTTTCAGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGTGGTAACCTTGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTCACTGTAGGGTGGGCCATTTATCCA SYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQVLGVSEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNLASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGACTGG------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGATACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTCACTGTA---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203758 [I-Planctomycetes-b] SS114a0C7_env_samples_DQ203758 gi|77547964|gb|DQ203758| Uncultured bacterium clone SS114a0C7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0C7 predicted proteorhodopsin gene, partial cds DQ203758 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGATTGGCTAATTACTGTCCCCCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTCACAGTGGTCAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAGACTCAAGTCCTTGGCGTTTCAGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATTATTTTTGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGTGGTAACCTTGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTCACTGTAGGTTGGGCCATTTATCCA SYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQVLGVSEMVGFIIGMAGWLYIIFEIFKGEASKLNANSGNLASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGATTGG------------------------CTAATTACTGTCCCCCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTC---ACAGTGGTCAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGC---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATTATTTTTGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTCACTGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIFEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203456 [I-Planctomycetes-b] medHO10C4_env_samples_DQ203456 gi|77547360|gb|DQ203456| Uncultured bacterium clone medHO10C4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10C4 predicted proteorhodopsin gene, partial cds DQ203456 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGATTGGCTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTCACAGTGGTCAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAGACTCAAGTCCTTGGTGTTTCAGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATTATTTTTGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGTGGTAACCTTGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTCACTGTAGGGTGGGCCATTTACCCA SYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQVLGVSEMVGFIIGMAGWLYIIFEIFKGEASKLNANSGNLASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGATTGG------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTC---ACAGTGGTCAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATTATTTTTGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTCACTGTA---------------------------------------------------------------GGGTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIFEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203538 [I-Planctomycetes-b] MedHO1202E10_env_samples_DQ203538 gi|77547524|gb|DQ203538| Uncultured bacterium clone MedHO1202E10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202E10 predicted proteorhodopsin gene, partial cds DQ203538 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGACTGGCTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTCACAGTGGTCAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAGACTCAAGTCCTTGGTGTTTCAGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATTATTTTTGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGTGGTAACCTTGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTCACTGTAGGTTGGGCCATATATCCA SYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQVLGVSEMVGFIIGMAGWLYIIFEIFKGEASKLNANSGNLASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGACTGG------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTC---ACAGTGGTCAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATTATTTTTGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTCACTGTA---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIFEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203372 [I-Planctomycetes-b] MedHO102C8_env_samples_DQ203372 gi|77547192|gb|DQ203372| Uncultured bacterium clone MedHO102C8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102C8 predicted proteorhodopsin gene, partial cds DQ203372 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGACTGGCTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTCACAGTGGTCAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAGACTCAAGTCCTTGGTGTTTCAGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATTATTTTTGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGTGGTAACCTTGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTCACTGTAGGGTGGGCCATATATCCA SYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQVLGVSEMVGFIIGMAGWLYIIFEIFKGEASKLNANSGNLASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGACTGG------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTC---ACAGTGGTCAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATTATTTTTGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTCACTGTA---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIFEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203690 [I-Planctomycetes-b] medHO155C9_env_samples_DQ203690 gi|77547828|gb|DQ203690| Uncultured bacterium clone medHO155C9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155C9 predicted proteorhodopsin gene, partial cds DQ203690 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTCACAGTGGTCAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAGACTCAAGTCCTTGGTGTTTCAGAAATGTTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGTGGTAACCTTGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTCACTGTAGGGTGGGCCATATATCCA RYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQVLGVSEMFGFIIGMAGWLYIIYEIFKGEASKLNANSGNLASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTC---ACAGTGGTCAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGTTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTCACTGTA---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MFG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203648 [I-Planctomycetes-b] medHO120G6_env_samples_DQ203648 gi|77547744|gb|DQ203648| Uncultured bacterium clone medHO120G6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120G6 predicted proteorhodopsin gene, partial cds DQ203648 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGACTGGCTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCTTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAGACTCAAGTCCTTGGTGTTTCAGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGTGGTAACCTTGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTCACTGTAGGTTGGGCCATATATCCA SYIDWLITVPLQIVEFYLILAAVTVVSVRLFWKLLVASLVMLVGGYLGETQVLGVSEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNLASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGACTGG------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCTTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTCACTGTA---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RL------------FWK-LLVASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203817 [I-Planctomycetes-b] SS114a40D11_env_samples_DQ203817 gi|77548082|gb|DQ203817| Uncultured bacterium clone SS114a40D11 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40D11 predicted proteorhodopsin gene, partial cds DQ203817 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGATTGGCTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAGACTCAAGTCCTTGGTGTTTCAGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGTGGTAACCTTGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTCACTGTAGGTTGGGCCATCTACCCA SYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQVLGVSEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNLASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGATTGG------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTCACTGTA---------------------------------------------------------------GGTTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203358 [I-Planctomycetes-b] MedHO102B5_env_samples_DQ203358 gi|77547164|gb|DQ203358| Uncultured bacterium clone MedHO102B5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102B5 predicted proteorhodopsin gene, partial cds DQ203358 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAGACTCAAGTCCTTGGTGTTTCAGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGTGGTAACCTTGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTCGCTGTAGGGTGGGCAATCTACCCA RYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQVLGVSEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNLASQNAFKTIRLIVAVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTCGCTGTA---------------------------------------------------------------GGGTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVAV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203386 [I-Planctomycetes-b] MedHO102E1_env_samples_DQ203386 gi|77547220|gb|DQ203386| Uncultured bacterium clone MedHO102E1 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102E1 predicted proteorhodopsin gene, partial cds DQ203386 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTGATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTATTGGGTGGTTACTTAGGCGAGACTCAAGTTCTTGGTGTTTCTGAAATGGTTGGATTCATCATTGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGTGGTAACCTTGCCTCTCAGAATGCTTTCAAGACAATTCGTCTTATTGTAACTGTAGGGTGGGCAATATACCCA RYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLLGGYLGETQVLGVSEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNLASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTGATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTATTGGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTT---------------------------------CTTGGT---GTT---------------------------------------------------------TCTGAA------------------ATGGTTGGA---TTCATCATTGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACAATT---CGTCTTATTGTAACTGTA---------------------------------------------------------------GGGTGG---------GCAATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLLGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203562 [I-Planctomycetes-b] MedHO1202G2_env_samples_DQ203562 gi|77547572|gb|DQ203562| Uncultured bacterium clone MedHO1202G2 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202G2 predicted proteorhodopsin gene, partial cds DQ203562 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATATATTGACTGGCTGATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTATTGGGTGGTTACTTAGGCGAGACTCAAGTTCTTGGTGTTTCTGAAATGGTTGGATTCATCATTGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGTGGTAACCTTGCCTCTCAGAATGCTTTCAAGACAATTCGTCTTATTGTAACTGTAGGTTGGGCAATTTACCCA RYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLLGGYLGETQVLGVSEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNLASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATATATTGACTGG------------------------CTGATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTATTGGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTT---------------------------------CTTGGT---GTT---------------------------------------------------------TCTGAA------------------ATGGTTGGA---TTCATCATTGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACAATT---CGTCTTATTGTAACTGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLLGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203700 [I-Planctomycetes-b] medHO155D8_env_samples_DQ203700 gi|77547848|gb|DQ203700| Uncultured bacterium clone medHO155D8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155D8 predicted proteorhodopsin gene, partial cds DQ203700 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATAGACTGGCTGATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTATTGGGTGGTTACTTAGGCGAGACTCAAGTTCTTGGTGTTTCTGAAATGGTTGGATTCATCATTGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGTGGTAACCTTGCCTCTCAGAATGCTTTCAAGACAATTCGTCTTATTGTAACTGTAGGTTGGGCCATTTATCCA RYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLLGGYLGETQVLGVSEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNLASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTATTGGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTT---------------------------------CTTGGT---GTT---------------------------------------------------------TCTGAA------------------ATGGTTGGA---TTCATCATTGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACAATT---CGTCTTATTGTAACTGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLLGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203520 [I-Planctomycetes-b] MedHO1202C4_env_samples_DQ203520 gi|77547488|gb|DQ203520| Uncultured bacterium clone MedHO1202C4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202C4 predicted proteorhodopsin gene, partial cds DQ203520 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGACTGGCTGATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTATTGGGTGGTTACTTAGGCGAGACTCAAGTTCTTGGTGTTTCTGAAATGGTTGGATTCATCATTGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGTGGTAACCTTGCCTCTCAGAATGCTTTCAAGACAATTCGTCTTATTGTAACTGTAGGTTGGGCAATTTACCCA SYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLLGGYLGETQVLGVSEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNLASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGACTGG------------------------CTGATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTATTGGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTT---------------------------------CTTGGT---GTT---------------------------------------------------------TCTGAA------------------ATGGTTGGA---TTCATCATTGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACAATT---CGTCTTATTGTAACTGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLLGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ339183 [I-Planctomycetes-b] clone_S-SOM-C12_DQ339183 gi|85681343|gb|DQ339183| Uncultured bacterium clone S-SOM-C12 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-C12 predicted proteorhodopsin gene, partial cds. DQ339183 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na CGATACATAGACTGGCTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTTGCATCACTTGTCATGCTATTGGGTGGTTACTTAGGCGAGACTCAAGTTCTTGGTGTTTCTGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGCGAAGCCTCCAAGCTTAACGCAAACAGTGGTAACCTTGCCTCTCAGAATGCTTTCAAGACAATTCGTCTGATTGTTACTGTAGGGTGGGCCATTTACCCA RYIDWLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLLGGYLGETQVLGVSEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNLASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATAGACTGG------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTTGCATCACTTGTCATGCTATTGGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTT---------------------------------CTTGGT---GTT---------------------------------------------------------TCTGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGCGAAGCCTCCAAGCTTAACGCAAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACAATT---CGTCTGATTGTTACTGTA---------------------------------------------------------------GGGTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLLGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_JX863202 [I-Planctomycetes-b] MALINA_OTU35_379_Q_env_samples_JX863202 gi|425477354|gb|JX863202| Uncultured bacterium clone MALINA OTU35 379 Q putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU35 379 Q putative proteorhodopsin gene, partial cds JX863202 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 08-juil-09 0m_depth Pacific Ocean marine 53.36 -159.29 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTGGTAAGCGTACGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTAGGTGGTTACCTAGGCGAGACTCAAATCCTTGGTGTTTCAGAAATGACTGGATTCATCATAGGTATGGTCGGGTGGCTCTACATCATCTACGAAATCTTTAAAGGTGAAGCTTCCAAGCTTAATGCAAACAGTGGTAACATTGCCTCTCAAAATGCTTTCAAGACGATCCGTCTAATTGTAACTTTA WLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQILGVSEMTGFIIGMVGWLYIIYEIFKGEASKLNANSGNIASQNAFKTIRLIVTL ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTGGTAAGCGTA---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTAGGTGGTTACCTAGGCGAG---------ACT------------------CAA------ATC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGACTGGA---TTCATCATAGGTATGGTCGGGTGGCTCTACATCATCTACGAAATC---------------TTT------AAA---GGTGAAGCTTCCAAGCTTAATGCAAAC------AGT---GGTAACATTGCCTCT---CAA---AAT---GCT---TTC---AAG---ACGATC---CGTCTAATTGTAACTTTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--I-----------LG-V-------------------SE------MTG-FIIGMVGWLYIIYEI-----F--K-GEASKLNAN--S-GNIAS-Q-N-A-F-K-TI-RLIVTL-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ339180 [I-Planctomycetes-b] clone_S-SOM-B9_DQ339180 gi|85681337|gb|DQ339180| Uncultured bacterium clone S-SOM-B9 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-B9 predicted proteorhodopsin gene, partial cds. DQ339180 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATTACTGTCCCTCTCCAAATCGTAGAATTCTACTTGATCCTTGCTGCAGTTACCGTGGTCGGTGTTCGCGTATTCTGGAAGCTCCTAGTCGCATCACTTGTCATGCTATTGGGTGGATACTTAGGCGAGACTCAACTTTTACCATCAATGGCTGGATTCGTCATTGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGCGAAGCCTCCCAGCTTAATGAAAGTAGTGGTAACCTAGCTTCTCAGAATGCTTTCAAGACAATTCGTCTGATTGTCACTGTAGGTTGGGCCATTTATCCA RYIDWLITVPLQIVEFYLILAAVTVVGVRVFWKLLVASLVMLLGGYLGETQLLPSMAGFVIGMAGWLYIIYEIFKGEASQLNESSGNLASQNAFKTIRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAATTCTACTTGATCCTTGCTGCA---------GTT---ACCGTGGTCGGTGTT---CGCGTA------------------------------------TTCTGGAAG---CTCCTAGTCGCATCACTTGTCATGCTATTGGGTGGATACTTAGGCGAG---------ACT------------------CAA------CTT---------------------------------TTA------------------------------------------------------------------CCATCA------------------ATGGCTGGA---TTCGTCATTGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGCGAAGCCTCCCAGCTTAATGAAAGT------AGT---GGTAACCTAGCTTCT---CAG---AAT---GCT---TTC---AAG---ACAATT---CGTCTGATTGTCACTGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TVVGV-RV------------FWK-LLVASLVMLLGGYLGE---T------Q--L-----------L----------------------PS------MAG-FVIGMAGWLYIIYEI-----F--K-GEASQLNES--S-GNLAS-Q-N-A-F-K-TI-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203688 [I-Planctomycetes-b] medHO155C7_env_samples_DQ203688 gi|77547824|gb|DQ203688| Uncultured bacterium clone medHO155C7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155C7 predicted proteorhodopsin gene, partial cds DQ203688 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGACTGGCTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTGGTGCGAAGGTATTCTGGAAGCTTTTAGGATACTCACTCATAATGCTTGTCGGTGGTTACTTAGGCGAGACTCAACTTGTGCCATCATTGGTTGGATTCGGCATTGGTATGCTTGGATGGCTCCTCATCATCTGGGAAATCTTTAAAGGCGATGCCTCCCAGCTTAACGCAAACAGCGGTAACCTAGCTTCTCAGAATGCTTTCAAGACGATCCGTCTAATTGTCACATTTGGGTGGGCCATCTATCCA RYIDWLITVPLQIVEFYLILAAVTVVGAKVFWKLLGYSLIMLVGGYLGETQLVPSLVGFGIGMLGWLLIIWEIFKGDASQLNANSGNLASQNAFKTIRLIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGACTGG------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTGGTGCG---AAGGTA------------------------------------TTCTGGAAG---CTTTTAGGATACTCACTCATAATGCTTGTCGGTGGTTACTTAGGCGAG---------ACT------------------CAA------CTT---------------------------------GTG------------------------------------------------------------------CCATCA------------------TTGGTTGGA---TTCGGCATTGGTATGCTTGGATGGCTCCTCATCATCTGGGAAATC---------------TTT------AAA---GGCGATGCCTCCCAGCTTAACGCAAAC------AGC---GGTAACCTAGCTTCT---CAG---AAT---GCT---TTC---AAG---ACGATC---CGTCTAATTGTCACATTT---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TVVGA-KV------------FWK-LLGYSLIMLVGGYLGE---T------Q--L-----------V----------------------PS------LVG-FGIGMLGWLLIIWEI-----F--K-GDASQLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ339276 [I-Planctomycetes-b] clone_S-S80M-C5_DQ339276 gi|85681527|gb|DQ339276| Uncultured bacterium clone S-S80M-C5 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-C5 predicted proteorhodopsin gene, partial cds. DQ339276 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTAATTACTGTCCCCCTTCAAATCGTAGAGTTTTACTTAATTCTTGCTGCAGTTACTGTAGTGAGCGCAAAAGTTTTCTGGAAGCTTTTAGGAGCATCGCTAGTAATGCTATTAGGTAGTTACCTAGGCGAGACTGGACTACTTGATCCAACGTTTGGGTTTATCGTAGGTATGGTTGGATGGCTCTTCATCATCTATTATATCTTCAAAGGTGAAGCTTCCCAGCTTAATGAAAACAGCGGAAACGTTGCATCTCAGAATGCTTTCAAGATGATCCGTCTGATTGTGACTTTTGGGTGGGCCATTTATCCA RYIDWLITVPLQIVEFYLILAAVTVVSAKVFWKLLGASLVMLLGSYLGETGLLDPTFGFIVGMVGWLFIIYYIFKGEASQLNENSGNVASQNAFKMIRLIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATTACTGTCCCCCTTCAAATCGTAGAGTTTTACTTAATTCTTGCTGCA---------GTT---ACTGTAGTGAGCGCA---AAAGTT------------------------------------TTCTGGAAG---CTTTTAGGAGCATCGCTAGTAATGCTATTAGGTAGTTACCTAGGCGAG---------ACT------------------GGA------CTA---------------------------------CTT------------------------------------------------------------------GATCCA------------------ACGTTTGGG---TTTATCGTAGGTATGGTTGGATGGCTCTTCATCATCTATTATATC---------------TTC------AAA---GGTGAAGCTTCCCAGCTTAATGAAAAC------AGC---GGAAACGTTGCATCT---CAG---AAT---GCT---TTC---AAG---ATGATC---CGTCTGATTGTGACTTTT---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TVVSA-KV------------FWK-LLGASLVMLLGSYLGE---T------G--L-----------L----------------------DP------TFG-FIVGMVGWLFIIYYI-----F--K-GEASQLNEN--S-GNVAS-Q-N-A-F-K-MI-RLIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_JX863209 [I-Planctomycetes-b] MALINA_OTU62_405_Q_env_samples_JX863209 gi|425477368|gb|JX863209| Uncultured bacterium clone MALINA OTU62 405 Q putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU62 405 Q putative proteorhodopsin gene, partial cds JX863209 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 16Aug2009 0m_depth Arctic Ocean marine 69.51 -133.42 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGATAACTGTGCCACTGCAAATAGTAGAGTTTTACTTAATTCTTGCTGCAGTGACAGTGGTCAGCGTGCGAGTCTTCTGGAAGCTCTTAGTCGCATCTCTGGTAATGCTGATTGGTGGTTACTTGGGTGAGGCTGGTTATGTAGATACAACACTTGGATTTGCTGTGGGCATGGCAGGCTGGCTCTACATCATCTATGAAATCTTTAAAGGTGAAGCCTCTAAGCTCAATGCGAACAGCGGCAATGTGGCTTCTCAGAAAGCCTTTAAGACTATTCGTCTTATTGTTACCGTT WLITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLIGGYLGEAGYVDTTLGFAVGMAGWLYIIYEIFKGEASKLNANSGNVASQKAFKTIRLIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGATAACTGTGCCACTGCAAATAGTAGAGTTTTACTTAATTCTTGCTGCA---------GTG---ACAGTGGTCAGCGTG---CGAGTC------------------------------------TTCTGGAAG---CTCTTAGTCGCATCTCTGGTAATGCTGATTGGTGGTTACTTGGGTGAG---------GCT------------------GGT------TAT---------------------------------GTA------------------------------------------------------------------GATACA------------------ACACTTGGA---TTTGCTGTGGGCATGGCAGGCTGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCTAAGCTCAATGCGAAC------AGC---GGCAATGTGGCTTCT---CAG---AAA---GCC---TTT---AAG---ACTATT---CGTCTTATTGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLIGGYLGE---A------G--Y-----------V----------------------DT------TLG-FAVGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNVAS-Q-K-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_EU079200 [I-Planctomycetes-b] NASB_58_env_samples_EU079200 gi|156106560|gb|EU079200| Uncultured organism clone NASB 58 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 58 putative proteorhodopsin gene, partial cds EU079200 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGATATGTTGATTGGCTGATCACTGTGCCGCTGCAAATAGTAGAGTTCTACTTGATTCTTGCTGCGGTGACTGCGGTCAGCGTGCGCGTATTCTGGAAGCTTTTAATTGCATCACTGGTTATGCAGATTGGTGGTTACCTGGGTGAGGCTGGCTACGTAGACGTAACACTTGGATTTATTGTGGGCATGGCAGGCTGGCTCTACATCATCTATGAGATCTTCAAAGGTGAGGCCTCTAAGCTGAATGCAAATAGCGGTAATCTAGCTTCTCAGACAGCCTTTAAGACGATTCGTCTGATTGTTACCGTTGGGTGGGCAATCTAC RYVDWLITVPLQIVEFYLILAAVTAVSVRVFWKLLIASLVMQIGGYLGEAGYVDVTLGFIVGMAGWLYIIYEIFKGEASKLNANSGNLASQTAFKTIRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATATGTTGATTGG------------------------CTGATCACTGTGCCGCTGCAAATAGTAGAGTTCTACTTGATTCTTGCTGCG---------GTG---ACTGCGGTCAGCGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAATTGCATCACTGGTTATGCAGATTGGTGGTTACCTGGGTGAG---------GCT------------------GGC------TAC---------------------------------GTA------------------------------------------------------------------GACGTA------------------ACACTTGGA---TTTATTGTGGGCATGGCAGGCTGGCTCTACATCATCTATGAGATC---------------TTC------AAA---GGTGAGGCCTCTAAGCTGAATGCAAAT------AGC---GGTAATCTAGCTTCT---CAG---ACA---GCC---TTT---AAG---ACGATT---CGTCTGATTGTTACCGTT---------------------------------------------------------------GGGTGG---------GCAATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LITVPLQIVEFYLILAA---V-TAVSV-RV------------FWK-LLIASLVMQIGGYLGE---A------G--Y-----------V----------------------DV------TLG-FIVGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-T-A-F-K-TI-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ926102 [I-Planctomycetes-b] BOUM_OTU015_env_samples gb|KJ926102| Uncultured bacterium clone BOUM OTU015 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU015 putative proteorhodopsin gene, partial cds KJ926102 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 33.709667 32.644667 #na #na #na #na #na GTTGATTGGCTGATCACTGTTCCGCTGCAAATAGTAGAGTTCTACTTGATTCTTGCTGCGGTGACTGCGGTCAGCGTGCGCGTTTTCTGGAAGCTTTTAATTGCATCACTAGTTATGCTGATTGGTGGTTACCTGGGTGAGGCTGGCTACGTAGACGTAACACTTGGATTTATTGTGGGCATGGCAGGCTGGCTCTACATCATCTACGAGATCTTCAAAGGTGAGGCCTCTAAGCTGAATGCAAATAGCGGTAATCTGGCTTCTCAGACAGCCTTTAAGACGATTCGTCTGATTGTTACCGTTGGCTGGGCCATCTAC VDWLITVPLQIVEFYLILAAVTAVSVRVFWKLLIASLVMLIGGYLGEAGYVDVTLGFIVGMAGWLYIIYEIFKGEASKLNANSGNLASQTAFKTIRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGATTGG------------------------CTGATCACTGTTCCGCTGCAAATAGTAGAGTTCTACTTGATTCTTGCTGCG---------GTG---ACTGCGGTCAGCGTG---CGCGTT------------------------------------TTCTGGAAG---CTTTTAATTGCATCACTAGTTATGCTGATTGGTGGTTACCTGGGTGAG---------GCT------------------GGC------TAC---------------------------------GTA------------------------------------------------------------------GACGTA------------------ACACTTGGA---TTTATTGTGGGCATGGCAGGCTGGCTCTACATCATCTACGAGATC---------------TTC------AAA---GGTGAGGCCTCTAAGCTGAATGCAAAT------AGC---GGTAATCTGGCTTCT---CAG---ACA---GCC---TTT---AAG---ACGATT---CGTCTGATTGTTACCGTT---------------------------------------------------------------GGCTGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPLQIVEFYLILAA---V-TAVSV-RV------------FWK-LLIASLVMLIGGYLGE---A------G--Y-----------V----------------------DV------TLG-FIVGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-T-A-F-K-TI-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203306 [I-Planctomycetes-b] SS114a80B3_env_samples_DQ203306 gi|77547060|gb|DQ203306| Uncultured bacterium clone SS114a80B3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a80B3 predicted proteorhodopsin gene, partial cds DQ203306 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_80m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_2003 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATAGATTGGCTCATAACGGTCCCGCTACAAATAGTAGAATTCTATCTTATCTTAGCTGCTGTTACTGTAGTTAGAGTAAATGTTTTCTGGAAGCTTCTTACTGCATCAATAGTTATGCTTGTTGGAGGATACATGGGCGAAGCAGGTTACATTAGTGCTAATATTGGCTTTATCGTTGGAATGGCTGGATGGTTATATATCATTTATGAGATTTTCAAAGGAGAAGCTTCAAAGGTCAATGCATCTAGCGGAAGTATTGCTTCACAAAAAGCATTTAAGACAATAAGAGCTATCGTTACTTTCGGGTGGGCCATATATCCA SYIDWLITVPLQIVEFYLILAAVTVVRVNVFWKLLTASIVMLVGGYMGEAGYISANIGFIVGMAGWLYIIYEIFKGEASKVNASSGSIASQKAFKTIRAIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATAGATTGG------------------------CTCATAACGGTCCCGCTACAAATAGTAGAATTCTATCTTATCTTAGCTGCT---------GTT---ACTGTAGTTAGAGTA---AATGTT------------------------------------TTCTGGAAG---CTTCTTACTGCATCAATAGTTATGCTTGTTGGAGGATACATGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATT------------------------------------------------------------------AGTGCT------------------AATATTGGC---TTTATCGTTGGAATGGCTGGATGGTTATATATCATTTATGAGATT---------------TTC------AAA---GGAGAAGCTTCAAAGGTCAATGCATCT------AGC---GGAAGTATTGCTTCA---CAA---AAA---GCA---TTT---AAG---ACAATA---AGAGCTATCGTTACTTTC---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIVEFYLILAA---V-TVVRV-NV------------FWK-LLTASIVMLVGGYMGE---A------G--Y-----------I----------------------SA------NIG-FIVGMAGWLYIIYEI-----F--K-GEASKVNAS--S-GSIAS-Q-K-A-F-K-TI-RAIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203310 [I-Planctomycetes-b] SS114a80C11_env_samples_DQ203310 gi|77547068|gb|DQ203310| Uncultured bacterium clone SS114a80C11 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a80C11 predicted proteorhodopsin gene, partial cds DQ203310 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_80m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_2003 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATCGATTGGCTCATAACGGTCCCGCTACAAGTAGTAGAATTCTATCTTATCTTAGCTGCTGTTACTGTAGTTAGAGTAAATGTTTTCTGGAAGCTTCTTACTGCATCAATAGTTATGCTTGTTGGAGGATACATGGGCGAAGCAGGTTACATTAGTGCTAATATTGGCTTTATCGTTGGAATGGCTGGATGGTTATATATCATTTATGAGATTTTCAAAGGAGAAGCTTCAAAGGTCAATGCATCTAGCGGAAGTATTGCTTCACAAAAAGCATTTAAGACAATAAGAGCTATCGTTACTTTCGGGTGGGCAATTTACCCA RYIDWLITVPLQVVEFYLILAAVTVVRVNVFWKLLTASIVMLVGGYMGEAGYISANIGFIVGMAGWLYIIYEIFKGEASKVNASSGSIASQKAFKTIRAIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATCGATTGG------------------------CTCATAACGGTCCCGCTACAAGTAGTAGAATTCTATCTTATCTTAGCTGCT---------GTT---ACTGTAGTTAGAGTA---AATGTT------------------------------------TTCTGGAAG---CTTCTTACTGCATCAATAGTTATGCTTGTTGGAGGATACATGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATT------------------------------------------------------------------AGTGCT------------------AATATTGGC---TTTATCGTTGGAATGGCTGGATGGTTATATATCATTTATGAGATT---------------TTC------AAA---GGAGAAGCTTCAAAGGTCAATGCATCT------AGC---GGAAGTATTGCTTCA---CAA---AAA---GCA---TTT---AAG---ACAATA---AGAGCTATCGTTACTTTC---------------------------------------------------------------GGGTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYLILAA---V-TVVRV-NV------------FWK-LLTASIVMLVGGYMGE---A------G--Y-----------I----------------------SA------NIG-FIVGMAGWLYIIYEI-----F--K-GEASKVNAS--S-GSIAS-Q-K-A-F-K-TI-RAIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203335 [I-Planctomycetes-b] SS114a80G6_env_samples_DQ203335 gi|77547118|gb|DQ203335| Uncultured bacterium clone SS114a80G6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a80G6 predicted proteorhodopsin gene, partial cds DQ203335 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_80m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_2003 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTATATCGATTGGCTCATAACGGTCCCGCTACAAATAGTAGAATTCTATCTTATCTTAGCTGCTGTTACTGTAGTTAGAGTAAATGTTTTCTGGAAGCTTCTTACTGCATCAATAGTCATGCTTGTTGGAGGATATATGGGTGAAGCAGGTTATATTAGTGCTAATATTGGCTTTATCGTTGGAATGGCTGGATGGTTATATATCATTTATGAGATTTTCAAGGGAGAAGCTTCAAAGGTCAATGCATCTAGCGGAAGTATTGCTTCACAAAAAGCATTCAAGACAATAAGAGCTATCGTTACTTTCGGTTGGGCCATTTACCCA RYIDWLITVPLQIVEFYLILAAVTVVRVNVFWKLLTASIVMLVGGYMGEAGYISANIGFIVGMAGWLYIIYEIFKGEASKVNASSGSIASQKAFKTIRAIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTATATCGATTGG------------------------CTCATAACGGTCCCGCTACAAATAGTAGAATTCTATCTTATCTTAGCTGCT---------GTT---ACTGTAGTTAGAGTA---AATGTT------------------------------------TTCTGGAAG---CTTCTTACTGCATCAATAGTCATGCTTGTTGGAGGATATATGGGTGAA---------GCA------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------AGTGCT------------------AATATTGGC---TTTATCGTTGGAATGGCTGGATGGTTATATATCATTTATGAGATT---------------TTC------AAG---GGAGAAGCTTCAAAGGTCAATGCATCT------AGC---GGAAGTATTGCTTCA---CAA---AAA---GCA---TTC---AAG---ACAATA---AGAGCTATCGTTACTTTC---------------------------------------------------------------GGTTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TVVRV-NV------------FWK-LLTASIVMLVGGYMGE---A------G--Y-----------I----------------------SA------NIG-FIVGMAGWLYIIYEI-----F--K-GEASKVNAS--S-GSIAS-Q-K-A-F-K-TI-RAIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ339350 [I-Planctomycetes-b] clone_S-S4OM-B5_DQ339350 gi|85681671|gb|DQ339350| Uncultured bacterium clone S-S4OM-B5 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-B5 predicted proteorhodopsin gene, partial cds. DQ339350 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTTATTACAGTTCCTCTACAAATTGTAGAATTCTATCTTATTTTAGCTGCTGTTACCGTGGTTAGAGTGAATGTGTTTTGGAAACTCCTTACAGCTTCAGTTGTTATGCTTGTTGGAGGATATATGGGCGAGGCAGGTTATCTTAGTGCTAACGTTGGTTTCATCGTAGGAATGGCTGGTTGGTTATTCATCATTTATGAGATCTTTAAAGGAGAAGCTTCCAAAGTAAATGCTTCTAGCGGTAGTATTGCGTCTCAAAAAGCATTCAAGACTATAAGAGCAATCGTTACATTTGGGTGGGCCATCTATCCA RYIDWLITVPLQIVEFYLILAAVTVVRVNVFWKLLTASVVMLVGGYMGEAGYLSANVGFIVGMAGWLFIIYEIFKGEASKVNASSGSIASQKAFKTIRAIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTTATTACAGTTCCTCTACAAATTGTAGAATTCTATCTTATTTTAGCTGCT---------GTT---ACCGTGGTTAGAGTG---AATGTG------------------------------------TTTTGGAAA---CTCCTTACAGCTTCAGTTGTTATGCTTGTTGGAGGATATATGGGCGAG---------GCA------------------GGT------TAT---------------------------------CTT------------------------------------------------------------------AGTGCT------------------AACGTTGGT---TTCATCGTAGGAATGGCTGGTTGGTTATTCATCATTTATGAGATC---------------TTT------AAA---GGAGAAGCTTCCAAAGTAAATGCTTCT------AGC---GGTAGTATTGCGTCT---CAA---AAA---GCA---TTC---AAG---ACTATA---AGAGCAATCGTTACATTT---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TVVRV-NV------------FWK-LLTASVVMLVGGYMGE---A------G--Y-----------L----------------------SA------NVG-FIVGMAGWLFIIYEI-----F--K-GEASKVNAS--S-GSIAS-Q-K-A-F-K-TI-RAIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ339359 [I-Planctomycetes-b] clone_S-S4OM-C3_DQ339359 gi|85681689|gb|DQ339359| Uncultured bacterium clone S-S4OM-C3 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-C3 predicted proteorhodopsin gene, partial cds. DQ339359 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTTATTACAGTTCCTCTACAAATTGTAGAATTCTATCTTATTTTAGCTGCTGTTACCGTGGTTAGAGTGAATGTGTTTTGGAAACTCCTTACAGCTTCAGTTGTTATGCTTGTTGGAGGATATATGGGCGAGGCAGGTTATCTTAGTGCTAACGTTGGTTTCATCGTAGGAATGGCTGGTTGGTTATTCATCATTTATGAGATCTTTAAAGGAGAAGCTTCCAAAGTAAATGCTTCTAGCGGTAGTATTGCGTCTCAAAAAGCATTCAAGACTATAAGAGCAATCGTTACATTTGGGTGGGCCATATATCCA RYIDWLITVPLQIVEFYLILAAVTVVRVNVFWKLLTASVVMLVGGYMGEAGYLSANVGFIVGMAGWLFIIYEIFKGEASKVNASSGSIASQKAFKTIRAIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTTATTACAGTTCCTCTACAAATTGTAGAATTCTATCTTATTTTAGCTGCT---------GTT---ACCGTGGTTAGAGTG---AATGTG------------------------------------TTTTGGAAA---CTCCTTACAGCTTCAGTTGTTATGCTTGTTGGAGGATATATGGGCGAG---------GCA------------------GGT------TAT---------------------------------CTT------------------------------------------------------------------AGTGCT------------------AACGTTGGT---TTCATCGTAGGAATGGCTGGTTGGTTATTCATCATTTATGAGATC---------------TTT------AAA---GGAGAAGCTTCCAAAGTAAATGCTTCT------AGC---GGTAGTATTGCGTCT---CAA---AAA---GCA---TTC---AAG---ACTATA---AGAGCAATCGTTACATTT---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TVVRV-NV------------FWK-LLTASVVMLVGGYMGE---A------G--Y-----------L----------------------SA------NVG-FIVGMAGWLFIIYEI-----F--K-GEASKVNAS--S-GSIAS-Q-K-A-F-K-TI-RAIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203439 [I-Planctomycetes-b] medHO10A5_env_samples_DQ203439 gi|77547326|gb|DQ203439| Uncultured bacterium clone medHO10A5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10A5 predicted proteorhodopsin gene, partial cds DQ203439 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTACATTGATTGGCTTATAACAGTTCCTCTACAAATAGTTGAATTCTATCTTATCTTAGCTGCTGTTACTGTAGTTAGAGTAAATGTTTTTTGGAAGCTTCTTACGGCATCAATAGTTATGCTGGTTGGTGGTTACATGGGTGAAGCTGGATACATTAGTGCAAGTCTGGGCTTTATTATAGGAATGGCTGGTTGGTTGTTCATAATATACGAGATCTTTATAGGTGAAGCCTCAAAGGTTAATGCTTCAAGTGGCAGTATTGCATCCCAAAAAGCGTTTAAAACAATTAGAGCAATTGTTACTTTTGGCTGGGCCATTTACCCA RYIDWLITVPLQIVEFYLILAAVTVVRVNVFWKLLTASIVMLVGGYMGEAGYISASLGFIIGMAGWLFIIYEIFIGEASKVNASSGSIASQKAFKTIRAIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATTGATTGG------------------------CTTATAACAGTTCCTCTACAAATAGTTGAATTCTATCTTATCTTAGCTGCT---------GTT---ACTGTAGTTAGAGTA---AATGTT------------------------------------TTTTGGAAG---CTTCTTACGGCATCAATAGTTATGCTGGTTGGTGGTTACATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AGTGCA------------------AGTCTGGGC---TTTATTATAGGAATGGCTGGTTGGTTGTTCATAATATACGAGATC---------------TTT------ATA---GGTGAAGCCTCAAAGGTTAATGCTTCA------AGT---GGCAGTATTGCATCC---CAA---AAA---GCG---TTT---AAA---ACAATT---AGAGCAATTGTTACTTTT---------------------------------------------------------------GGCTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TVVRV-NV------------FWK-LLTASIVMLVGGYMGE---A------G--Y-----------I----------------------SA------SLG-FIIGMAGWLFIIYEI-----F--I-GEASKVNAS--S-GSIAS-Q-K-A-F-K-TI-RAIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203728 [I-Planctomycetes-b] medHO155G9_env_samples_DQ203728 gi|77547904|gb|DQ203728| Uncultured bacterium clone medHO155G9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155G9 predicted proteorhodopsin gene, partial cds DQ203728 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGATTGGCTTATAACAGTTCCTCTACAAATAGTTGAATTCTATCTTATCTTAGCTGCTGTTACTGTAGTTAGAGTAAATGTTTTTTGGAAGCTTCTAACTGCATCAATAGTTATGCTGGTTGGTGGTTACATGGGTGAAGCTGGATACATTAGTGCAAGTCTGGGCTTTATTATAGGAATGGCTGGTTGGTTGTTCATAATATACGAGATCTTTATAGGTGAAGCCTCAAAGGTTAATGCTTCAAGTGGCAGTATTGCATCCCAAAAAGCGTTTAAAACAATTAGAGCAATTGTTACTTTTGGTTGGGCCATCTATCCA SYIDWLITVPLQIVEFYLILAAVTVVRVNVFWKLLTASIVMLVGGYMGEAGYISASLGFIIGMAGWLFIIYEIFIGEASKVNASSGSIASQKAFKTIRAIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGATTGG------------------------CTTATAACAGTTCCTCTACAAATAGTTGAATTCTATCTTATCTTAGCTGCT---------GTT---ACTGTAGTTAGAGTA---AATGTT------------------------------------TTTTGGAAG---CTTCTAACTGCATCAATAGTTATGCTGGTTGGTGGTTACATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AGTGCA------------------AGTCTGGGC---TTTATTATAGGAATGGCTGGTTGGTTGTTCATAATATACGAGATC---------------TTT------ATA---GGTGAAGCCTCAAAGGTTAATGCTTCA------AGT---GGCAGTATTGCATCC---CAA---AAA---GCG---TTT---AAA---ACAATT---AGAGCAATTGTTACTTTT---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIVEFYLILAA---V-TVVRV-NV------------FWK-LLTASIVMLVGGYMGE---A------G--Y-----------I----------------------SA------SLG-FIIGMAGWLFIIYEI-----F--I-GEASKVNAS--S-GSIAS-Q-K-A-F-K-TI-RAIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203451 [I-Planctomycetes-b] medHO10B7_env_samples_DQ203451 gi|77547350|gb|DQ203451| Uncultured bacterium clone medHO10B7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10B7 predicted proteorhodopsin gene, partial cds DQ203451 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATCGATTGGCTTATTACCGTTCCGCTCCAAATTATTGAGTTCTACCTTATCCTAGCAGCTGTGACTGTGGTTAGAGCAAATGTTTTTTGGAAACTTTTAACTGCCTCAGTTGTAATGCTTGTCGGGGGTTATTTGGGTGAAGCTGGATATATTAGTGCTGTTCTTGGATTTATCATTGGAATGGCTGGATGGTTGTTTATTATCTACGAAATTTTTGTAGGTGAAGCCTCTAAGGTTAATGCATCAAGTGGTAGTATTGCCTCACAAAAAGCATATAAAACTATTAGAACAATCGTTACATTCGGCTGGGCTATCTATCCA SYIDWLITVPLQIIEFYLILAAVTVVRANVFWKLLTASVVMLVGGYLGEAGYISAVLGFIIGMAGWLFIIYEIFVGEASKVNASSGSIASQKAYKTIRTIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATCGATTGG------------------------CTTATTACCGTTCCGCTCCAAATTATTGAGTTCTACCTTATCCTAGCAGCT---------GTG---ACTGTGGTTAGAGCA---AATGTT------------------------------------TTTTGGAAA---CTTTTAACTGCCTCAGTTGTAATGCTTGTCGGGGGTTATTTGGGTGAA---------GCT------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AGTGCT------------------GTTCTTGGA---TTTATCATTGGAATGGCTGGATGGTTGTTTATTATCTACGAAATT---------------TTT------GTA---GGTGAAGCCTCTAAGGTTAATGCATCA------AGT---GGTAGTATTGCCTCA---CAA---AAA---GCA---TAT---AAA---ACTATT---AGAACAATCGTTACATTC---------------------------------------------------------------GGCTGG---------GCTATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIIEFYLILAA---V-TVVRA-NV------------FWK-LLTASVVMLVGGYLGE---A------G--Y-----------I----------------------SA------VLG-FIIGMAGWLFIIYEI-----F--V-GEASKVNAS--S-GSIAS-Q-K-A-Y-K-TI-RTIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203516 [I-Planctomycetes-b] MedHO1202C10_env_samples_DQ203516 gi|77547480|gb|DQ203516| Uncultured bacterium clone MedHO1202C10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202C10 predicted proteorhodopsin gene, partial cds DQ203516 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTACATTGATTGGCTGATCACAGTACCCCTTCAAATTGTTGAATTCTACATTATTTTGGCAGCAGTCACCAAAGTAAGCGTCGATCTTTTCTGGAAGCTACTCATTGCATCTCTTGTCATGCTCATCGGTGGCTATGCAGGAGAAGCTGGCTACATGGAAGTGGAACCTGCATTTATCATAGGTATGGCTGGCTGGGTATACATTATTCACTCCATTTTTAAGGGCGAAGCCGCAAAGATTAATGAACAAAGCGGTAATCCTGCGTCGCAGCAAGCGTTTAGAACGATTCGTGCAATTGTCACCTTCGGTTGGGCCATTTATCCA RYIDWLITVPLQIVEFYIILAAVTKVSVDLFWKLLIASLVMLIGGYAGEAGYMEVEPAFIIGMAGWVYIIHSIFKGEAAKINEQSGNPASQQAFRTIRAIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATTGATTGG------------------------CTGATCACAGTACCCCTTCAAATTGTTGAATTCTACATTATTTTGGCAGCA---------GTC---ACCAAAGTAAGCGTC---GATCTT------------------------------------TTCTGGAAG---CTACTCATTGCATCTCTTGTCATGCTCATCGGTGGCTATGCAGGAGAA---------GCT------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GAAGTG------------------GAACCTGCA---TTTATCATAGGTATGGCTGGCTGGGTATACATTATTCACTCCATT---------------TTT------AAG---GGCGAAGCCGCAAAGATTAATGAACAA------AGC---GGTAATCCTGCGTCG---CAG---CAA---GCG---TTT---AGA---ACGATT---CGTGCAATTGTCACCTTC---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYIILAA---V-TKVSV-DL------------FWK-LLIASLVMLIGGYAGE---A------G--Y-----------M----------------------EV------EPA-FIIGMAGWVYIIHSI-----F--K-GEAAKINEQ--S-GNPAS-Q-Q-A-F-R-TI-RAIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_DQ203574 [I-Planctomycetes-b] MedHO1202H2_env_samples_DQ203574 gi|77547596|gb|DQ203574| Uncultured bacterium clone MedHO1202H2 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202H2 predicted proteorhodopsin gene, partial cds DQ203574 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTACATTGATTGGCTGATCACAGTACCCCTTCAAATTGTTGAATTCTACATTATTTTGGCAGCAGTCACCAAAGTAAGCGTCGATCTTTTCTGGAAGCTACTCATTGCATCTCTTGTCATGCTCATCGGTGGCTATGCAGGAGAAGCTGGCTACATGGAAGTGGAACCTGCATTTATCATAGGTATGGCTGGCTGGGTATACATTATTCACTCCATTTTTAAGGGCGAAGCCGCAAAGATTAATGAACAAAGCGGTAATCCTGCGTCGCAGCAAGCGTTTAGAACGATTCGTGCAATTGTCACCTTCGGTTGGGCCATTTATCCA RYIDWLITVPLQIVEFYIILAAVTKVSVDLFWKLLIASLVMLIGGYAGEAGYMEVEPAFIIGMAGWVYIIHSIFKGEAAKINEQSGNPASQQAFRTIRAIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATTGATTGG------------------------CTGATCACAGTACCCCTTCAAATTGTTGAATTCTACATTATTTTGGCAGCA---------GTC---ACCAAAGTAAGCGTC---GATCTT------------------------------------TTCTGGAAG---CTACTCATTGCATCTCTTGTCATGCTCATCGGTGGCTATGCAGGAGAA---------GCT------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GAAGTG------------------GAACCTGCA---TTTATCATAGGTATGGCTGGCTGGGTATACATTATTCACTCCATT---------------TTT------AAG---GGCGAAGCCGCAAAGATTAATGAACAA------AGC---GGTAATCCTGCGTCG---CAG---CAA---GCG---TTT---AGA---ACGATT---CGTGCAATTGTCACCTTC---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYIILAA---V-TKVSV-DL------------FWK-LLIASLVMLIGGYAGE---A------G--Y-----------M----------------------EV------EPA-FIIGMAGWVYIIHSI-----F--K-GEAAKINEQ--S-GNPAS-Q-Q-A-F-R-TI-RAIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-HF10_49E08]_EF089402 [I-Planctomycetes-HF10_49E08] HF10_49E08_genomic_EF089402 gi|119713764|gb|EF089402| Uncultured marine bacterium HF10 49E08 genomic sequence Uncultured marine bacterium HF10 49E08 genomic sequence EF089402 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/HF10_49E08-like subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster HF10_49E08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:415447 genomic_DNA other 02APR2008 #na North_Pacific_Subtropical_Gyre/Hawaii_Ocean_Time_Series_Station_ALOHA/10m_below_sea_surface Pacific Ocean marine 22.75 -158 Proteorhodopsin photosystem gene clusters exhibit coevolutionary trends and shared ancestry among diverse marine microbial phyla McCarren,J. and DeLong,E.F. Environ. Microbiol. 9 (4), 846858 (2007) 17359257 #na ATGACATTCGCTGATGATCATGCAGACGAAGAAACGGCCGCAACGGAACCTGCGGAAGTTGTTTATGATGGTTCCTTGCACCCAGATGATTTTGTGGGAGTAAGCTTTTGGCTGGCCACAGCGATGATGCTTGCTGCTACTGTATTCTTTTTTATTGAGCGTGATCGCGTTAAGGGAAAGTGGAAAACTTCTCTTACAGTCGCAGGGTTAGTTACAGGTATTGCATTTTGGCATTATATGTACATGCGAGAAGTCTGGGTTAACACAGGTACAAGCCCAACAGTATTTAGGTATGTAGATTGGCTGATTACCGTGCCTTTGCAGATTGTTGAATTTTACTTAATTCTTGCAGCCGTCACTAAGGTTAGTGCAAATCTTTTCTGGAAATTACTGATAGCTTCACTCGTAATGCTAATCGGTGGGTATGCAGGAGAAGCAGGTTATGCTGATGTAGGTCCCGCTTTCTTCGTCGGAATGGCTGGATGGATTTACATCATCTACGAAATCTTTAAAGGAGAAGCTTCCCAAATCAATGAAAACAGTGGTAATGCAGCCAGTCAGCAAGCCTTCAAAACCATTCGTGCCATTGTTACCTTCGGTTGGGCTATCTATCCTATCGGATATTACCTCGCTTACATGGGAGGTGGAACCAACGATAGTGAAACTTTGAACATTGTTTATAATCTTGCAGACTTAGTCAATAAGGCAGCCTTCGGACTTGCTATTTGGGTCGCAGCAACAAGCGACAGCGAGCAGAACGCT MTFADDHADEETAATEPAEVVYDGSLHPDDFVGVSFWLATAMMLAATVFFFIERDRVKGKWKTSLTVAGLVTGIAFWHYMYMREVWVNTGTSPTVFRYVDWLITVPLQIVEFYLILAAVTKVSANLFWKLLIASLVMLIGGYAGEAGYADVGPAFFVGMAGWIYIIYEIFKGEASQINENSGNAASQQAFKTIRAIVTFGWAIYPIGYYLAYMGGGTNDSETLNIVYNLADLVNKAAFGLAIWVAATSDSEQNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGACATTCGCTGATGATCATGCAGACGAAGAAACGGCCGCAACGGAACCTGCGGAAGTTGTTTATGATGGTTCCTTGCACCCAGATGATTTTGTGGGAGTAAGCTTTTGGCTGGCCACAGCGATGATGCTTGCTGCTACTGTATTCTTTTTTATTGAGCGTGATCGCGTTAAGGGA---AAGTGGAAAACTTCTCTTACAGTCGCAGGGTTAGTTACAGGTATTGCATTTTGGCATTATATGTACATGCGAGAAGTCTGGGTT---------------------------------------------------AACACAGGTACAAGCCCAACAGTATTTAGGTATGTAGATTGG------------------------CTGATTACCGTGCCTTTGCAGATTGTTGAATTTTACTTAATTCTTGCAGCC---------GTC---ACTAAGGTTAGTGCA---AATCTT------------------------------------TTCTGGAAA---TTACTGATAGCTTCACTCGTAATGCTAATCGGTGGGTATGCAGGAGAA---------GCA------------------GGT------TAT---------------------------------GCT------------------------------------------------------------------GATGTA------------------GGTCCCGCT---TTCTTCGTCGGAATGGCTGGATGGATTTACATCATCTACGAAATC---------------TTT------AAA---GGAGAAGCTTCCCAAATCAATGAAAAC------AGT---GGTAATGCAGCCAGT---CAG---CAA---GCC---TTC---AAA---ACCATT---CGTGCCATTGTTACCTTC---------------------------------------------------------------GGTTGG---------GCTATCTATCCTATCGGATATTACCTCGCTTACATGGGA------------------------------------GGTGGAACCAACGATAGTGAAACTTTGAACATTGTTTATAATCTTGCAGACTTAGTCAATAAGGCAGCCTTCGGACTTGCTATTTGGGTCGCAGCAACAAGCGACAGCGAGCAGAACGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------MTFADDHADEETAATEPAEVVYDGSLHPDDFVGVSFWLATAMMLAATVFFFIERDRVKG-KWKTSLTVAGLVTGIAFWHYMYMREVWV-----------------NTGTSPTVFRYVDW--------LITVPLQIVEFYLILAA---V-TKVSA-NL------------FWK-LLIASLVMLIGGYAGE---A------G--Y-----------A----------------------DV------GPA-FFVGMAGWIYIIYEI-----F--K-GEASQINEN--S-GNAAS-Q-Q-A-F-K-TI-RAIVTF---------------------GW---AIYPIGYYLAYMG------------GGTNDSETLNIVYNLADLVNKAAFGLAIWVAATSDSEQNA------------------------------------- [I-Planctomycetes-HF10_49E08]_EF088625 [I-Planctomycetes-HF10_49E08] PF13028_env_samples_EF088625 gi|126843500|gb|EF088625| Uncultured bacterium clone PF13028 putative proteorhodopsin gene, partial cds Uncultured bacterium clone PF13028 putative proteorhodopsin gene, partial cds EF088625 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/HF10_49E08-like subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster HF10_49E08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na surface_water_sample Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGCTAGCCGCTACTGCTTTCTTCTTTATTGAGCGTGATCGCGTCAAAGGAAAGTGGAAAACCTCTCTTACAGTTGCAGGCTTAGTTACAGGTATTGCGTTTTGGCATTACATGTACATGCGGGAAGTCTGGGTAAACACGGGTGCAAGCCCAACGGTATTTAGGTATGTAGACTGGTTGATTACTGTACCTTTACAAATTGTTGAGTTTTATTTAATCCTTGCAGCCGTCACTAAGGTTAGTGCTAATCTTTTCTGGAAATTATTGATAGCTTCACTCGTAATGCTAATAGGTGGGTATGCTGGAGAAGCTGGTTATGCGGATGTAGGTCCCGCATTCTTTGTTGGAATGGCTGGATGGATTTACATCATCTATGAAATCTTTAAAGGAGAAGCTTCCCAAATCAATGAGAACAGTGGTAATGCAGCCAGTCAACAAGCCTTCAAAACTATCCGTGCCATTGTTACCTTCGGCTGGGCGATATACCCA MLAATAFFFIERDRVKGKWKTSLTVAGLVTGIAFWHYMYMREVWVNTGASPTVFRYVDWLITVPLQIVEFYLILAAVTKVSANLFWKLLIASLVMLIGGYAGEAGYADVGPAFFVGMAGWIYIIYEIFKGEASQINENSGNAASQQAFKTIRAIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTAGCCGCTACTGCTTTCTTCTTTATTGAGCGTGATCGCGTCAAAGGA---AAGTGGAAAACCTCTCTTACAGTTGCAGGCTTAGTTACAGGTATTGCGTTTTGGCATTACATGTACATGCGGGAAGTCTGGGTA---------------------------------------------------AACACGGGTGCAAGCCCAACGGTATTTAGGTATGTAGACTGG------------------------TTGATTACTGTACCTTTACAAATTGTTGAGTTTTATTTAATCCTTGCAGCC---------GTC---ACTAAGGTTAGTGCT---AATCTT------------------------------------TTCTGGAAA---TTATTGATAGCTTCACTCGTAATGCTAATAGGTGGGTATGCTGGAGAA---------GCT------------------GGT------TAT---------------------------------GCG------------------------------------------------------------------GATGTA------------------GGTCCCGCA---TTCTTTGTTGGAATGGCTGGATGGATTTACATCATCTATGAAATC---------------TTT------AAA---GGAGAAGCTTCCCAAATCAATGAGAAC------AGT---GGTAATGCAGCCAGT---CAA---CAA---GCC---TTC---AAA---ACTATC---CGTGCCATTGTTACCTTC---------------------------------------------------------------GGCTGG---------GCGATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFIERDRVKG-KWKTSLTVAGLVTGIAFWHYMYMREVWV-----------------NTGASPTVFRYVDW--------LITVPLQIVEFYLILAA---V-TKVSA-NL------------FWK-LLIASLVMLIGGYAGE---A------G--Y-----------A----------------------DV------GPA-FFVGMAGWIYIIYEI-----F--K-GEASQINEN--S-GNAAS-Q-Q-A-F-K-TI-RAIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-HF10_49E08]_DQ062259 [I-Planctomycetes-HF10_49E08] MEDPR42E12_env_samples_DQ062259 gi|67483463|gb|DQ062259| Uncultured bacterium clone MEDPR42E12 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR42E12 proteorhodopsin gene, partial cds DQ062259 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/HF10_49E08-like subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster HF10_49E08-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na AGATACATAGATTGGCTGATAACCGTACCATTACAGATTGTGGAATTCTACTTAATTCTAGCAGCTGTAACCACAGTTAATGCAAATCTCTTCTGGAAGTTGCTCGTTGCATCACTTGTCATGTTGATTGGTGGATATGCAGGAGAGGCCGGATACGCCGAAGTCGGTCCCGCATTCTTTGTCGGTATGGCAGGTTGGCTTTACATCATCTATGAAATCTTCAAGGGTGAAGCATCACAGCTTAATGAAAACAGTGGAAATGCAGCTTGTCAGCAAGCTTTCAAAACTATTCGTGCGATTGTCACCTTCGGTTGGGCTATATATCCA RYIDWLITVPLQIVEFYLILAAVTTVNANLFWKLLVASLVMLIGGYAGEAGYAEVGPAFFVGMAGWLYIIYEIFKGEASQLNENSGNAACQQAFKTIRAIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGATTGG------------------------CTGATAACCGTACCATTACAGATTGTGGAATTCTACTTAATTCTAGCAGCT---------GTA---ACCACAGTTAATGCA---AATCTC------------------------------------TTCTGGAAG---TTGCTCGTTGCATCACTTGTCATGTTGATTGGTGGATATGCAGGAGAG---------GCC------------------GGA------TAC---------------------------------GCC------------------------------------------------------------------GAAGTC------------------GGTCCCGCA---TTCTTTGTCGGTATGGCAGGTTGGCTTTACATCATCTATGAAATC---------------TTC------AAG---GGTGAAGCATCACAGCTTAATGAAAAC------AGT---GGAAATGCAGCTTGT---CAG---CAA---GCT---TTC---AAA---ACTATT---CGTGCGATTGTCACCTTC---------------------------------------------------------------GGTTGG---------GCTATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TTVNA-NL------------FWK-LLVASLVMLIGGYAGE---A------G--Y-----------A----------------------EV------GPA-FFVGMAGWLYIIYEI-----F--K-GEASQLNEN--S-GNAAC-Q-Q-A-F-K-TI-RAIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes]_EU915888 [I-Planctomycetes] US080220_env_samples_EU915888 gi|229358658|gb|EU915888| Uncultured microorganism clone US080220 putative proteorhodopsin gene, partial cds Uncultured microorganism clone US080220 putative proteorhodopsin gene, partial cds EU915888 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_surface_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTCGCCGCTACTGTGTTCTTCTTCATCGAAAGAGACCGTGTCAAAGGCAAATGGAAAACTTCTCTCTCCGTCGCCGGTCTTGTGACGGGTGTTGCATTTTGGCACTACATGTATATGCGAAATGTTTGGGTTGATACCGGTGAATCGCCAACAGTATTTCGGTACATTGATTGGTTGATAACCGTTCCACTTCAAATTGTTGAGTTTTACTTAATCCTTGCTGCGGTAACAGCGGTAAGTGGAAGAGTTTTCTGGAGATTGTTGATCGCTTCTCTCGTTATGCTAGTAGGTGGATATCTTGGTGAGACAGGACAACTAGAAGTGATGCCCGCATTTATAATTGGAATGGCCGGGTGGATTTACATCATCTGGGAAATTTTCAAGGGTGAAGCTTCACAAATTAACGAAGCGAGCGGAAATGCTGCTTCTCAACAGGCTTTCAGAACAATAAGAGCTATTGTAACTTTCGGCTGGGCCATATAC MLAATVFFFIERDRVKGKWKTSLSVAGLVTGVAFWHYMYMRNVWVDTGESPTVFRYIDWLITVPLQIVEFYLILAAVTAVSGRVFWRLLIASLVMLVGGYLGETGQLEVMPAFIIGMAGWIYIIWEIFKGEASQINEASGNAASQQAFRTIRAIVTFGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTCGCCGCTACTGTGTTCTTCTTCATCGAAAGAGACCGTGTCAAAGGC---AAATGGAAAACTTCTCTCTCCGTCGCCGGTCTTGTGACGGGTGTTGCATTTTGGCACTACATGTATATGCGAAATGTTTGGGTT---------------------------------------------------GATACCGGTGAATCGCCAACAGTATTTCGGTACATTGATTGG------------------------TTGATAACCGTTCCACTTCAAATTGTTGAGTTTTACTTAATCCTTGCTGCG---------GTA---ACAGCGGTAAGTGGA---AGAGTT------------------------------------TTCTGGAGA---TTGTTGATCGCTTCTCTCGTTATGCTAGTAGGTGGATATCTTGGTGAG---------ACA------------------GGA------CAA---------------------------------CTA------------------------------------------------------------------GAAGTG------------------ATGCCCGCA---TTTATAATTGGAATGGCCGGGTGGATTTACATCATCTGGGAAATT---------------TTC------AAG---GGTGAAGCTTCACAAATTAACGAAGCG------AGC---GGAAATGCTGCTTCT---CAA---CAG---GCT---TTC---AGA---ACAATA---AGAGCTATTGTAACTTTC---------------------------------------------------------------GGCTGG---------GCCATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFIERDRVKG-KWKTSLSVAGLVTGVAFWHYMYMRNVWV-----------------DTGESPTVFRYIDW--------LITVPLQIVEFYLILAA---V-TAVSG-RV------------FWR-LLIASLVMLVGGYLGE---T------G--Q-----------L----------------------EV------MPA-FIIGMAGWIYIIWEI-----F--K-GEASQINEA--S-GNAAS-Q-Q-A-F-R-TI-RAIVTF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [I-Planctomycetes-a]_DQ422662 [I-Planctomycetes-a] clone_med-tb04-20m-c4_DQ422662 gi|90024844|gb|DQ422662| Uncultured bacterium clone med-tb04-20m-c4 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-c4 putative proteorhodopsin gene, partial cds. DQ422662 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/A subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTCATTACAGTCCCTTTGCAAATTGTTGAATTCTATCTCATACTTGCTGCAGTGACTAAAGTGAGTGCCAATGTATTTTGGAAGTTACTGATTGGATCACTGGTCATGCTCATCGGAGGATATGTAGGTGAAACAAATGAAGTGTACAAGACTTCAGGATTTGTCGTAGGTATGATAGGGTGGGTGTATATAATCTGGGAAATTTTCAAGGGCGAAGCTTCCCAACTCAATGAAAACAGTGGAAACGCTGCCTGCCAACAAGCCTTTAAAACTATTCGTTTGATTGTAACTTTTGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYLILAAVTKVSANVFWKLLIGSLVMLIGGYVGETNEVYKTSGFVVGMIGWVYIIWEIFKGEASQLNENSGNAACQQAFKTIRLIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATTACAGTCCCTTTGCAAATTGTTGAATTCTATCTCATACTTGCTGCA---------GTG---ACTAAAGTGAGTGCC---AATGTA------------------------------------TTTTGGAAG---TTACTGATTGGATCACTGGTCATGCTCATCGGAGGATATGTAGGTGAA---------ACA------------------AAT------GAA---------------------------------GTG------------------------------------------------------------------TACAAG------------------ACTTCAGGA---TTTGTCGTAGGTATGATAGGGTGGGTGTATATAATCTGGGAAATT---------------TTC------AAG---GGCGAAGCTTCCCAACTCAATGAAAAC------AGT---GGAAACGCTGCCTGC---CAA---CAA---GCC---TTT---AAA---ACTATT---CGTTTGATTGTAACTTTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TKVSA-NV------------FWK-LLIGSLVMLIGGYVGE---T------N--E-----------V----------------------YK------TSG-FVVGMIGWVYIIWEI-----F--K-GEASQLNEN--S-GNAAC-Q-Q-A-F-K-TI-RLIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-a]_DQ422514 [I-Planctomycetes-a] clone_med-tb04-50m-f6_DQ422514 gi|90024548|gb|DQ422514| Uncultured bacterium clone med-tb04-50m-f6 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-f6 putative proteorhodopsin gene, partial cds. DQ422514 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/A subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGATTGGCTCATTACAGTCCCTTTGCAAATTGTTGAATTCTATCTCATACTTGCTGCAGTGACTAAAGTGAGTGCCAATGTATTTTGGAAGTTACTGATTGGATCACTGGTCATGCTCATCGGAGGATATGTAGGTGAAACAAATGAAGTGTACAAGACTTCAGGATTTGTCGTAGGTATGATAGGGTGGGTGTATATAATCTGGGAAATTTTCAAGGGCGAAGCTTCCCAACTCAATGAAAACAGTGGAAACGCTGCCTGCCAACAAGCCTTTAAAACTATTCGTTTGATTGTAACTTTTGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYLILAAVTKVSANVFWKLLIGSLVMLIGGYVGETNEVYKTSGFVVGMIGWVYIIWEIFKGEASQLNENSGNAACQQAFKTIRLIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGATTGG------------------------CTCATTACAGTCCCTTTGCAAATTGTTGAATTCTATCTCATACTTGCTGCA---------GTG---ACTAAAGTGAGTGCC---AATGTA------------------------------------TTTTGGAAG---TTACTGATTGGATCACTGGTCATGCTCATCGGAGGATATGTAGGTGAA---------ACA------------------AAT------GAA---------------------------------GTG------------------------------------------------------------------TACAAG------------------ACTTCAGGA---TTTGTCGTAGGTATGATAGGGTGGGTGTATATAATCTGGGAAATT---------------TTC------AAG---GGCGAAGCTTCCCAACTCAATGAAAAC------AGT---GGAAACGCTGCCTGC---CAA---CAA---GCC---TTT---AAA---ACTATT---CGTTTGATTGTAACTTTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TKVSA-NV------------FWK-LLIGSLVMLIGGYVGE---T------N--E-----------V----------------------YK------TSG-FVVGMIGWVYIIWEI-----F--K-GEASQLNEN--S-GNAAC-Q-Q-A-F-K-TI-RLIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-a]_DQ203731 [I-Planctomycetes-a] medHO155H5_env_samples_DQ203731 gi|77547910|gb|DQ203731| Uncultured bacterium clone medHO155H5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155H5 predicted proteorhodopsin gene, partial cds DQ203731 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/A subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGATTGGCTCATTACAGTCCCTTTGCAAATTGTTGAATTCTATCTCATACTTGCTGCAGTGACTAAAGTGAGTGCCAATGTATTTTGGAAGTTACTGATTGGATCACTGGTCATGCTCATCGGAGGATATGTAGGTGAAACAAATGAAGTGTACAAGACTTCAGGATTTGTCGTAGGTATGATAGGGTGGGTGTATATAATCTGGGAAATTTTCAAGGGCGAAGCTTCCCAACTCAATGAAAACAGTGGAAACGCTGCCTGCCAACAAGCCTTTAAAACTATTCGTTTGATTGTAACTTTTGGTTGGGCCATTTATCCA SYIDWLITVPLQIVEFYLILAAVTKVSANVFWKLLIGSLVMLIGGYVGETNEVYKTSGFVVGMIGWVYIIWEIFKGEASQLNENSGNAACQQAFKTIRLIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGATTGG------------------------CTCATTACAGTCCCTTTGCAAATTGTTGAATTCTATCTCATACTTGCTGCA---------GTG---ACTAAAGTGAGTGCC---AATGTA------------------------------------TTTTGGAAG---TTACTGATTGGATCACTGGTCATGCTCATCGGAGGATATGTAGGTGAA---------ACA------------------AAT------GAA---------------------------------GTG------------------------------------------------------------------TACAAG------------------ACTTCAGGA---TTTGTCGTAGGTATGATAGGGTGGGTGTATATAATCTGGGAAATT---------------TTC------AAG---GGCGAAGCTTCCCAACTCAATGAAAAC------AGT---GGAAACGCTGCCTGC---CAA---CAA---GCC---TTT---AAA---ACTATT---CGTTTGATTGTAACTTTT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIVEFYLILAA---V-TKVSA-NV------------FWK-LLIGSLVMLIGGYVGE---T------N--E-----------V----------------------YK------TSG-FVVGMIGWVYIIWEI-----F--K-GEASQLNEN--S-GNAAC-Q-Q-A-F-K-TI-RLIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-a]_DQ203509 [I-Planctomycetes-a] MedHO1202B4_env_samples_DQ203509 gi|77547466|gb|DQ203509| Uncultured bacterium clone MedHO1202B4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202B4 predicted proteorhodopsin gene, partial cds DQ203509 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/A subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGCTATATCGATTGGCTCATTACAGTCCCTTTGCAAATTGTTGAATTCTATCTCATACTTGCTGCAGTGACTAAAGTGAGTGCCAATGTATTTTGGAAGTTACTGATTGGATCACTGGTCATGCTCATCGGAGGATATGTAGGTGAAACAAATGAAGTGTACAAGACTTCAGGATTTGTCGTAGGTATGATAGGGTGGGTGTATATAATCTGGGAAATTTTCAAGGGCGAAGCTTCCCAACTCAATGAAAACAGTGGAAACGCTGCCTGCCAACAAGCCTTTAAAACTATTCGTTTGATTGTAACTTTTGGTTGGGCCATTTATCCA RYIDWLITVPLQIVEFYLILAAVTKVSANVFWKLLIGSLVMLIGGYVGETNEVYKTSGFVVGMIGWVYIIWEIFKGEASQLNENSGNAACQQAFKTIRLIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTATATCGATTGG------------------------CTCATTACAGTCCCTTTGCAAATTGTTGAATTCTATCTCATACTTGCTGCA---------GTG---ACTAAAGTGAGTGCC---AATGTA------------------------------------TTTTGGAAG---TTACTGATTGGATCACTGGTCATGCTCATCGGAGGATATGTAGGTGAA---------ACA------------------AAT------GAA---------------------------------GTG------------------------------------------------------------------TACAAG------------------ACTTCAGGA---TTTGTCGTAGGTATGATAGGGTGGGTGTATATAATCTGGGAAATT---------------TTC------AAG---GGCGAAGCTTCCCAACTCAATGAAAAC------AGT---GGAAACGCTGCCTGC---CAA---CAA---GCC---TTT---AAA---ACTATT---CGTTTGATTGTAACTTTT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TKVSA-NV------------FWK-LLIGSLVMLIGGYVGE---T------N--E-----------V----------------------YK------TSG-FVVGMIGWVYIIWEI-----F--K-GEASQLNEN--S-GNAAC-Q-Q-A-F-K-TI-RLIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-a]_DQ339343 [I-Planctomycetes-a] clone_S-S4OM-A9_DQ339343 gi|85681657|gb|DQ339343| Uncultured bacterium clone S-S4OM-A9 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-A9 predicted proteorhodopsin gene, partial cds. DQ339343 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/A subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGATTGGCTCATTACAGTCCCTTTGCAAATTGTTGAATTCTATCTCATACTTGCTGCAGTGACTAAAGTGAATGCCAATGTATTTTGGAAGCTACTAATTGGATCACTGGTCATGCTCATCGGAGGATATGTAGGTGAAACAAATGAAGTGTACAAGACTTCAGGATTTGTCGTAGGTATGATCGGATGGGTGTATATAATCTGGGAAATTTTCAAGGGCGAAGCTTCCCAACTCAATGAAAACAGTGGAAACGCTGCCTGCCAACAAGCCTTTAAAACTATTCGTTTGATTGTAACTTTTGGGTGGGCCATCTATCCA RYIDWLITVPLQIVEFYLILAAVTKVNANVFWKLLIGSLVMLIGGYVGETNEVYKTSGFVVGMIGWVYIIWEIFKGEASQLNENSGNAACQQAFKTIRLIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGATTGG------------------------CTCATTACAGTCCCTTTGCAAATTGTTGAATTCTATCTCATACTTGCTGCA---------GTG---ACTAAAGTGAATGCC---AATGTA------------------------------------TTTTGGAAG---CTACTAATTGGATCACTGGTCATGCTCATCGGAGGATATGTAGGTGAA---------ACA------------------AAT------GAA---------------------------------GTG------------------------------------------------------------------TACAAG------------------ACTTCAGGA---TTTGTCGTAGGTATGATCGGATGGGTGTATATAATCTGGGAAATT---------------TTC------AAG---GGCGAAGCTTCCCAACTCAATGAAAAC------AGT---GGAAACGCTGCCTGC---CAA---CAA---GCC---TTT---AAA---ACTATT---CGTTTGATTGTAACTTTT---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TKVNA-NV------------FWK-LLIGSLVMLIGGYVGE---T------N--E-----------V----------------------YK------TSG-FVVGMIGWVYIIWEI-----F--K-GEASQLNEN--S-GNAAC-Q-Q-A-F-K-TI-RLIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-a]_DQ203720 [I-Planctomycetes-a] medHO155G10_env_samples_DQ203720 gi|77547888|gb|DQ203720| Uncultured bacterium clone medHO155G10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155G10 predicted proteorhodopsin gene, partial cds DQ203720 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/A subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGATTGGCTCATTACAGTCCCTTTGCAAATTGTTGAATTCTATCTCATACTTGCTGCAGTGACTAAAGTGAGTGCCAATGTATTTTGGAAGCTACTAATTGGATCACTTGTCATGCTCATCGGAGGATATGTAGGTGAAACAAATGAAGTGTACAAGACTTCAGGATTTGTCGTAGGTATGATCGGATGGGTGTATATAATCTGGGAAATTTTCAAGGGCGAAGCTTCCCAACTCAATGAAAACAGTGGAAACGCTGCCTGCCAACAAGCCTTTAAAACTATTCGTTTGATTGTAACTTTTGGTTGGGCCATTTATCCA SYIDWLITVPLQIVEFYLILAAVTKVSANVFWKLLIGSLVMLIGGYVGETNEVYKTSGFVVGMIGWVYIIWEIFKGEASQLNENSGNAACQQAFKTIRLIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGATTGG------------------------CTCATTACAGTCCCTTTGCAAATTGTTGAATTCTATCTCATACTTGCTGCA---------GTG---ACTAAAGTGAGTGCC---AATGTA------------------------------------TTTTGGAAG---CTACTAATTGGATCACTTGTCATGCTCATCGGAGGATATGTAGGTGAA---------ACA------------------AAT------GAA---------------------------------GTG------------------------------------------------------------------TACAAG------------------ACTTCAGGA---TTTGTCGTAGGTATGATCGGATGGGTGTATATAATCTGGGAAATT---------------TTC------AAG---GGCGAAGCTTCCCAACTCAATGAAAAC------AGT---GGAAACGCTGCCTGC---CAA---CAA---GCC---TTT---AAA---ACTATT---CGTTTGATTGTAACTTTT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIVEFYLILAA---V-TKVSA-NV------------FWK-LLIGSLVMLIGGYVGE---T------N--E-----------V----------------------YK------TSG-FVVGMIGWVYIIWEI-----F--K-GEASQLNEN--S-GNAAC-Q-Q-A-F-K-TI-RLIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-a]_DQ203632 [I-Planctomycetes-a] medHO120F1_env_samples_DQ203632 gi|77547712|gb|DQ203632| Uncultured bacterium clone medHO120F1 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120F1 predicted proteorhodopsin gene, partial cds DQ203632 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/A subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGATTGGCTCATTACAGTCCCTTTGCAAATTGTTGAATTCTATCTCATACTTGCTGCAGTGACTAAAGTGAGTGCCAATGTATTTTGGAAGTTACTAATTGGATCACTGGTTATGCTCATCGGAGGATATGTAGGTGAAACAAATGAAGTGTACAAGACTTCAGGATTTGTCGTAGGTATGATAGGGTGGGTGTATATAATCTGGGAAATTTTCAAAGGCGAAGCTTCCCAACTCAATGAAAACAGTGGAAACGCTGCCTGCCAACAAGCCTTTAAAACTATTCGTTTGATTGTAACTTTTGGTTGGGCCATTTATCCA SYIDWLITVPLQIVEFYLILAAVTKVSANVFWKLLIGSLVMLIGGYVGETNEVYKTSGFVVGMIGWVYIIWEIFKGEASQLNENSGNAACQQAFKTIRLIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGATTGG------------------------CTCATTACAGTCCCTTTGCAAATTGTTGAATTCTATCTCATACTTGCTGCA---------GTG---ACTAAAGTGAGTGCC---AATGTA------------------------------------TTTTGGAAG---TTACTAATTGGATCACTGGTTATGCTCATCGGAGGATATGTAGGTGAA---------ACA------------------AAT------GAA---------------------------------GTG------------------------------------------------------------------TACAAG------------------ACTTCAGGA---TTTGTCGTAGGTATGATAGGGTGGGTGTATATAATCTGGGAAATT---------------TTC------AAA---GGCGAAGCTTCCCAACTCAATGAAAAC------AGT---GGAAACGCTGCCTGC---CAA---CAA---GCC---TTT---AAA---ACTATT---CGTTTGATTGTAACTTTT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIVEFYLILAA---V-TKVSA-NV------------FWK-LLIGSLVMLIGGYVGE---T------N--E-----------V----------------------YK------TSG-FVVGMIGWVYIIWEI-----F--K-GEASQLNEN--S-GNAAC-Q-Q-A-F-K-TI-RLIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-a]_DQ422169 [I-Planctomycetes-a] clone_med-0m-b6_DQ422169 gi|90023858|gb|DQ422169| Uncultured bacterium clone med-0m-b6 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-b6 putative proteorhodopsin gene, partial cds. DQ422169 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/A subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCATTACAGTCCCTTTGCAAATTGTTGAATTCTATCTTATACTTGCTGCAGTGACTAAAGTGAGTGCCAATGTATTTTGGAAGCTACTAATTGGATCACTTGTCATGCTCATCGGAGGATATGTAGGTGAAACAAATGAAGTGTACAAGACTTCAGGATTTGTCGTAGGTATGATCGGATGGGTGTATATAATCTGGGAAATTTTCAAGGGCGAAGCTTCCCAACTCAATGAAAACAGTGGAAATGCTGCCTGCCAACAAGCTTTTAAAACTATTCGTTTGATTGTGACATTTGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYLILAAVTKVSANVFWKLLIGSLVMLIGGYVGETNEVYKTSGFVVGMIGWVYIIWEIFKGEASQLNENSGNAACQQAFKTIRLIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCATTACAGTCCCTTTGCAAATTGTTGAATTCTATCTTATACTTGCTGCA---------GTG---ACTAAAGTGAGTGCC---AATGTA------------------------------------TTTTGGAAG---CTACTAATTGGATCACTTGTCATGCTCATCGGAGGATATGTAGGTGAA---------ACA------------------AAT------GAA---------------------------------GTG------------------------------------------------------------------TACAAG------------------ACTTCAGGA---TTTGTCGTAGGTATGATCGGATGGGTGTATATAATCTGGGAAATT---------------TTC------AAG---GGCGAAGCTTCCCAACTCAATGAAAAC------AGT---GGAAATGCTGCCTGC---CAA---CAA---GCT---TTT---AAA---ACTATT---CGTTTGATTGTGACATTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TKVSA-NV------------FWK-LLIGSLVMLIGGYVGE---T------N--E-----------V----------------------YK------TSG-FVVGMIGWVYIIWEI-----F--K-GEASQLNEN--S-GNAAC-Q-Q-A-F-K-TI-RLIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-a]_EU079216 [I-Planctomycetes-a] NASB_81_env_samples_EU079216 gi|156106592|gb|EU079216| Uncultured organism clone NASB 81 putative proteorhodopsinlike gene, partial sequence Uncultured organism clone NASB 81 putative proteorhodopsinlike gene, partial sequence EU079216 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/A subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGTTACATTGACTGGCTCATCACAGTACCCTTACAGATCGTTGAATTCTATCTCATACTTGCTGCAGTGACAAAAGTGAATGCCAATGTATTTTGGAAGTTATTAATTGGATCACTGGTCATGCTCATCGGGGGATATGTTGGTGAAACAAATGAATTATACAAGACTTCAGGATTTGTAGTAGGTATGATTGGGTGGTTGTATATAATTTGGGAAATCTTCAAGGGCGAAGCTTCTCAACTCAATGAAAACAGTGGAAATGCTGCCTGCCAACAAGCCTTTAAGACTATTCGTCTGATTGTAACTTTTGGGTGGGCAATATAT RYIDWLITVPLQIVEFYLILAAVTKVNANVFWKLLIGSLVMLIGGYVGETNELYKTSGFVVGMIGWLYIIWEIFKGEASQLNENSGNAACQQAFKTIRLIVTFGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTACATTGACTGG------------------------CTCATCACAGTACCCTTACAGATCGTTGAATTCTATCTCATACTTGCTGCA---------GTG---ACAAAAGTGAATGCC---AATGTA------------------------------------TTTTGGAAG---TTATTAATTGGATCACTGGTCATGCTCATCGGGGGATATGTTGGTGAA---------ACA------------------AAT------GAA---------------------------------TTA------------------------------------------------------------------TACAAG------------------ACTTCAGGA---TTTGTAGTAGGTATGATTGGGTGGTTGTATATAATTTGGGAAATC---------------TTC------AAG---GGCGAAGCTTCTCAACTCAATGAAAAC------AGT---GGAAATGCTGCCTGC---CAA---CAA---GCC---TTT---AAG---ACTATT---CGTCTGATTGTAACTTTT---------------------------------------------------------------GGGTGG---------GCAATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TKVNA-NV------------FWK-LLIGSLVMLIGGYVGE---T------N--E-----------L----------------------YK------TSG-FVVGMIGWLYIIWEI-----F--K-GEASQLNEN--S-GNAAC-Q-Q-A-F-K-TI-RLIVTF---------------------GW---AIY--------------------------------------------------------------------------------------------------- [I-Planctomycetes-a]_DQ203832 [I-Planctomycetes-a] SS114a40F11_env_samples_DQ203832 gi|77548112|gb|DQ203832| Uncultured bacterium clone SS114a40F11 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40F11 predicted proteorhodopsin gene, partial cds DQ203832 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/A subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATACATCGATTGGCTCATCACAGTACCCTTACAGATCGTTGAATTCTATCTCATACTTGCTGCAGTGACAAAAGTGAATGCCAATGTATTTTGGAAGTTATTAATTGGATCACTGGTCATGCTCATCGGGGGATATGTTGGTGAAACAAATGAATTATACAAGACTTCAGGATTTGTAGTAGGTATGATTGGGTGGTTGTATATAATTTGGGAAATCTTCAAGGGCGAAGCTTCTCAACTCAATGAAAACAGTGGAAATGCTGCCTGCCAACAAGCCTTTAAGACTATTCGTCTGATTGTAACTTTTGGCTGGGCAATCTATCCA RYIDWLITVPLQIVEFYLILAAVTKVNANVFWKLLIGSLVMLIGGYVGETNELYKTSGFVVGMIGWLYIIWEIFKGEASQLNENSGNAACQQAFKTIRLIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATCGATTGG------------------------CTCATCACAGTACCCTTACAGATCGTTGAATTCTATCTCATACTTGCTGCA---------GTG---ACAAAAGTGAATGCC---AATGTA------------------------------------TTTTGGAAG---TTATTAATTGGATCACTGGTCATGCTCATCGGGGGATATGTTGGTGAA---------ACA------------------AAT------GAA---------------------------------TTA------------------------------------------------------------------TACAAG------------------ACTTCAGGA---TTTGTAGTAGGTATGATTGGGTGGTTGTATATAATTTGGGAAATC---------------TTC------AAG---GGCGAAGCTTCTCAACTCAATGAAAAC------AGT---GGAAATGCTGCCTGC---CAA---CAA---GCC---TTT---AAG---ACTATT---CGTCTGATTGTAACTTTT---------------------------------------------------------------GGCTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TKVNA-NV------------FWK-LLIGSLVMLIGGYVGE---T------N--E-----------L----------------------YK------TSG-FVVGMIGWLYIIWEI-----F--K-GEASQLNEN--S-GNAAC-Q-Q-A-F-K-TI-RLIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-a]_DQ203333 [I-Planctomycetes-a] SS114a80G2_env_samples_DQ203333 gi|77547114|gb|DQ203333| Uncultured bacterium clone SS114a80G2 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a80G2 predicted proteorhodopsin gene, partial cds DQ203333 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/A subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_80m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_2003 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTCATCACAGTACCCTTACAGATCGTTGAATTCTATCTCATACTTGCTGCAGTGACAAAAGTGAATGCCAATGTATTTTGGAAGTTATTAATTGGATCACTGGTCATGCTCATCGGGGGATATGTTGGTGAAACAAATGAATTATACAAGACTTCAGGATTTGTAGTAGGTATGATTGGGTGGTTGTATATAATTTGGGAAATCTTCAAGGGCGAAGCTTCTCAACTCAATGAAAACAGTGGAAATGCTGCCTGCCAACAAGCCTTTAAGACTATTCGTCTGATTGTAACTTTTGGCTGGGCAATCTACCCA RYIDWLITVPLQIVEFYLILAAVTKVNANVFWKLLIGSLVMLIGGYVGETNELYKTSGFVVGMIGWLYIIWEIFKGEASQLNENSGNAACQQAFKTIRLIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTCATCACAGTACCCTTACAGATCGTTGAATTCTATCTCATACTTGCTGCA---------GTG---ACAAAAGTGAATGCC---AATGTA------------------------------------TTTTGGAAG---TTATTAATTGGATCACTGGTCATGCTCATCGGGGGATATGTTGGTGAA---------ACA------------------AAT------GAA---------------------------------TTA------------------------------------------------------------------TACAAG------------------ACTTCAGGA---TTTGTAGTAGGTATGATTGGGTGGTTGTATATAATTTGGGAAATC---------------TTC------AAG---GGCGAAGCTTCTCAACTCAATGAAAAC------AGT---GGAAATGCTGCCTGC---CAA---CAA---GCC---TTT---AAG---ACTATT---CGTCTGATTGTAACTTTT---------------------------------------------------------------GGCTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TKVNA-NV------------FWK-LLIGSLVMLIGGYVGE---T------N--E-----------L----------------------YK------TSG-FVVGMIGWLYIIWEI-----F--K-GEASQLNEN--S-GNAAC-Q-Q-A-F-K-TI-RLIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-a]_DQ203746 [I-Planctomycetes-a] SS114a0B10_env_samples_DQ203746 gi|77547940|gb|DQ203746| Uncultured bacterium clone SS114a0B10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0B10 predicted proteorhodopsin gene, partial cds DQ203746 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/A subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGATTGGCTCATCACAGTACCCTTACAGATCGTTGAATTCTATCTCATACTTGCTGCAGTGACAAAAGTGAATGCCAATGTATTTTGGAAGTTATTAATTGGATCACTGGTCATGCTCATCGGGGGATATGTTGGTGAAACAAATGAATTATACAAGACTTCAGGATTTGTAGTAGGTATGATTGGGTGGTTGTATATAATTTGGGAAATCTTCAAGGGCGAAGCTTCTCAACTCAATGAAAACAGTGGAAATGCTGCCTGCCAACAAGCCTTTAAGACTATTCGTCTGATTGTAACTTTTGGCTGGGCAATTTACCCA SYIDWLITVPLQIVEFYLILAAVTKVNANVFWKLLIGSLVMLIGGYVGETNELYKTSGFVVGMIGWLYIIWEIFKGEASQLNENSGNAACQQAFKTIRLIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGATTGG------------------------CTCATCACAGTACCCTTACAGATCGTTGAATTCTATCTCATACTTGCTGCA---------GTG---ACAAAAGTGAATGCC---AATGTA------------------------------------TTTTGGAAG---TTATTAATTGGATCACTGGTCATGCTCATCGGGGGATATGTTGGTGAA---------ACA------------------AAT------GAA---------------------------------TTA------------------------------------------------------------------TACAAG------------------ACTTCAGGA---TTTGTAGTAGGTATGATTGGGTGGTTGTATATAATTTGGGAAATC---------------TTC------AAG---GGCGAAGCTTCTCAACTCAATGAAAAC------AGT---GGAAATGCTGCCTGC---CAA---CAA---GCC---TTT---AAG---ACTATT---CGTCTGATTGTAACTTTT---------------------------------------------------------------GGCTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIVEFYLILAA---V-TKVNA-NV------------FWK-LLIGSLVMLIGGYVGE---T------N--E-----------L----------------------YK------TSG-FVVGMIGWLYIIWEI-----F--K-GEASQLNEN--S-GNAAC-Q-Q-A-F-K-TI-RLIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-a]_DQ203767 [I-Planctomycetes-a] SS114a0E10_env_samples_DQ203767 gi|77547982|gb|DQ203767| Uncultured bacterium clone SS114a0E10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0E10 predicted proteorhodopsin gene, partial cds DQ203767 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/A subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGATTGGCTCATCACAGTACCCTTACAGATCGTTGAATTCTATCTCATACTTGCTGCAGTGACAAAAGTGAATGCCAATGTATTTTGGAAGTTATTAATTGGATCACTGGTTATGCTCATCGGGGGATATGTTGGTGAAACAAATGAATTATACAAGACTTCAGGATTTGTAGTAGGTATGATTGGGTGGTTGTATATAATTTGGGAAATCTTCAAGGGCGAAGCTTCTCAACTCAATGAAAACAGTGGAAATGCTGCCTGCCAACAAGCCTTTAAGACTATTCGTCTGATTGTAACTTTTGGCTGGGCAATTTACCCA SYIDWLITVPLQIVEFYLILAAVTKVNANVFWKLLIGSLVMLIGGYVGETNELYKTSGFVVGMIGWLYIIWEIFKGEASQLNENSGNAACQQAFKTIRLIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGATTGG------------------------CTCATCACAGTACCCTTACAGATCGTTGAATTCTATCTCATACTTGCTGCA---------GTG---ACAAAAGTGAATGCC---AATGTA------------------------------------TTTTGGAAG---TTATTAATTGGATCACTGGTTATGCTCATCGGGGGATATGTTGGTGAA---------ACA------------------AAT------GAA---------------------------------TTA------------------------------------------------------------------TACAAG------------------ACTTCAGGA---TTTGTAGTAGGTATGATTGGGTGGTTGTATATAATTTGGGAAATC---------------TTC------AAG---GGCGAAGCTTCTCAACTCAATGAAAAC------AGT---GGAAATGCTGCCTGC---CAA---CAA---GCC---TTT---AAG---ACTATT---CGTCTGATTGTAACTTTT---------------------------------------------------------------GGCTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIVEFYLILAA---V-TKVNA-NV------------FWK-LLIGSLVMLIGGYVGE---T------N--E-----------L----------------------YK------TSG-FVVGMIGWLYIIWEI-----F--K-GEASQLNEN--S-GNAAC-Q-Q-A-F-K-TI-RLIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-a]_DQ203481 [I-Planctomycetes-a] medHO10G4_env_samples_DQ203481 gi|77547410|gb|DQ203481| Uncultured bacterium clone medHO10G4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10G4 predicted proteorhodopsin gene, partial cds DQ203481 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/A subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGATTGGCTCATCACAGTACCCTTACAGATCGTTGAATTCTATCTCATACTTGCTGCAGTGACAAAAGTGAATGCCAATGTATTTTGGAAGTTATTAATTGGATCACTGGTTATGCTAATCGGGGGATATGTTGGTGAAACAAATGAATTATACAAGACTTCAGGATTTGTAGTAGGTATGATTGGGTGGTTGTATATAATTTGGGAAATATTCAAGGGCGAAGCTTCTCAACTCAATGAAAACAGTGGTAATGCTGCCTGCCAACAAGCCTTTAAGACTATTCGTCTGATTGTAACTTTTGGCTGGGCGATCTACCCA RYIDWLITVPLQIVEFYLILAAVTKVNANVFWKLLIGSLVMLIGGYVGETNELYKTSGFVVGMIGWLYIIWEIFKGEASQLNENSGNAACQQAFKTIRLIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGATTGG------------------------CTCATCACAGTACCCTTACAGATCGTTGAATTCTATCTCATACTTGCTGCA---------GTG---ACAAAAGTGAATGCC---AATGTA------------------------------------TTTTGGAAG---TTATTAATTGGATCACTGGTTATGCTAATCGGGGGATATGTTGGTGAA---------ACA------------------AAT------GAA---------------------------------TTA------------------------------------------------------------------TACAAG------------------ACTTCAGGA---TTTGTAGTAGGTATGATTGGGTGGTTGTATATAATTTGGGAAATA---------------TTC------AAG---GGCGAAGCTTCTCAACTCAATGAAAAC------AGT---GGTAATGCTGCCTGC---CAA---CAA---GCC---TTT---AAG---ACTATT---CGTCTGATTGTAACTTTT---------------------------------------------------------------GGCTGG---------GCGATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TKVNA-NV------------FWK-LLIGSLVMLIGGYVGE---T------N--E-----------L----------------------YK------TSG-FVVGMIGWLYIIWEI-----F--K-GEASQLNEN--S-GNAAC-Q-Q-A-F-K-TI-RLIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Planctomycetes-a]_DQ203673 [I-Planctomycetes-a] medHO155B12_env_samples_DQ203673 gi|77547794|gb|DQ203673| Uncultured bacterium clone medHO155B12 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155B12 predicted proteorhodopsin gene, partial cds DQ203673 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/A subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGATTGGCTCATCACAGTACCCTTACAGATCGTTGAATTCTATCTCATACTTGCTGCAGTGACAAAAGTGAATGCCAATGTATTTTGGAAGTTATTAATTGGATCACTGGTCATGCTCATCGGGGGATATGTTGGTGAAACAAATGAATTATACAAGACTTCAGGATTTGTAGTAGGTATGATTGGGTGGTTGTATATAATTTGGGAAATCTTCAAGGGCGAAGCTTCTCAGCTCAATGAAAACAGTGGAAATGCTGCCTGCCAACAAGCCTTTAAGACTATTCGTCTGATTGTAACTTTTGGCTGGGCAATTTATCCA SYIDWLITVPLQIVEFYLILAAVTKVNANVFWKLLIGSLVMLIGGYVGETNELYKTSGFVVGMIGWLYIIWEIFKGEASQLNENSGNAACQQAFKTIRLIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGATTGG------------------------CTCATCACAGTACCCTTACAGATCGTTGAATTCTATCTCATACTTGCTGCA---------GTG---ACAAAAGTGAATGCC---AATGTA------------------------------------TTTTGGAAG---TTATTAATTGGATCACTGGTCATGCTCATCGGGGGATATGTTGGTGAA---------ACA------------------AAT------GAA---------------------------------TTA------------------------------------------------------------------TACAAG------------------ACTTCAGGA---TTTGTAGTAGGTATGATTGGGTGGTTGTATATAATTTGGGAAATC---------------TTC------AAG---GGCGAAGCTTCTCAGCTCAATGAAAAC------AGT---GGAAATGCTGCCTGC---CAA---CAA---GCC---TTT---AAG---ACTATT---CGTCTGATTGTAACTTTT---------------------------------------------------------------GGCTGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIVEFYLILAA---V-TKVNA-NV------------FWK-LLIGSLVMLIGGYVGE---T------N--E-----------L----------------------YK------TSG-FVVGMIGWLYIIWEI-----F--K-GEASQLNEN--S-GNAAC-Q-Q-A-F-K-TI-RLIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203518 [I-Gamma3-HF130_81H07] MedHO1202C12_env_samples_DQ203518 gi|77547484|gb|DQ203518| Uncultured bacterium clone MedHO1202C12 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202C12 predicted proteorhodopsin gene, partial cds DQ203518 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATTGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGTTAGTTTTCGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCAGCGAGTCAACAAGCATTCAATACAATCAAATGGATTGTTACTGTTGGTTGGGCAATATATCCA RYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATTGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGTTAGTTTTCGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCAGCGAGT---CAA---CAA---GCA---TTC---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203552 [I-Gamma3-HF130_81H07] MedHO1202F12_env_samples_DQ203552 gi|77547552|gb|DQ203552| Uncultured bacterium clone MedHO1202F12 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202F12 predicted proteorhodopsin gene, partial cds DQ203552 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTACATTGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATTGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGGTAGTTTTCGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAGCGCTGGAAGTGGAAATGCAGCGAGTCAACAAGCATTCAATACAATCAAATGGATTGTTACTGTTGGTTGGGCAATATATCCA RYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMVVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAASAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATTGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATTGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGGTAGTTTTCGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAGCGCTGGA------AGT---GGAAATGCAGCGAGT---CAA---CAA---GCA---TTC---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMVVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAASAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203683 [I-Gamma3-HF130_81H07] medHO155C2_env_samples_DQ203683 gi|77547814|gb|DQ203683| Uncultured bacterium clone medHO155C2 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155C2 predicted proteorhodopsin gene, partial cds DQ203683 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATTGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGTTAGTTTTCGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCAGCGAGTCAACAAGCATTCAATACAATCAAATGGATTGTTACTGTTGGTTGGGCAATATACCCA RYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATTGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGTTAGTTTTCGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCAGCGAGT---CAA---CAA---GCA---TTC---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCAATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203727 [I-Gamma3-HF130_81H07] medHO155G8_env_samples_DQ203727 gi|77547902|gb|DQ203727| Uncultured bacterium clone medHO155G8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155G8 predicted proteorhodopsin gene, partial cds DQ203727 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATTGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGTTAGTTTTCGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCAGCGAGTCAACAAGCATTCAATACAATCAAATGGATTGTTACTGTTGGCTGGGCAATCTATCCA RYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATTGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGTTAGTTTTCGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCAGCGAGT---CAA---CAA---GCA---TTC---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGCTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203560 [I-Gamma3-HF130_81H07] MedHO1202G11_env_samples_DQ203560 gi|77547568|gb|DQ203560| Uncultured bacterium clone MedHO1202G11 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202G11 predicted proteorhodopsin gene, partial cds DQ203560 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATTGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGTTAGTTTTCGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCAGCGAGTCAACAAGCATTCAATACAATCAAATGGATTGTTACTGTTGGTTGGGCAATCTACCCA RYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATTGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGTTAGTTTTCGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCAGCGAGT---CAA---CAA---GCA---TTC---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203398 [I-Gamma3-HF130_81H07] MedHO102F1_env_samples_DQ203398 gi|77547244|gb|DQ203398| Uncultured bacterium clone MedHO102F1 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102F1 predicted proteorhodopsin gene, partial cds DQ203398 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATTGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGTTAGTTTTCGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCAGCGAGTCAACAAGCATTCAATACAATCAAATGGATTGTTACTGTTGGGTGGGCAATCTATCCA RYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATTGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGTTAGTTTTCGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCAGCGAGT---CAA---CAA---GCA---TTC---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGGTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203527 [I-Gamma3-HF130_81H07] MedHO1202D10_env_samples_DQ203527 gi|77547502|gb|DQ203527| Uncultured bacterium clone MedHO1202D10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202D10 predicted proteorhodopsin gene, partial cds DQ203527 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATTGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGTTAGTTTTCGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCAGCGAGTCAACAAGCATTCAATACAATCAAATGGATTGTTACTGTTGGTTGGGCCATATATCCA RYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATTGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGTTAGTTTTCGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCAGCGAGT---CAA---CAA---GCA---TTC---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203530 [I-Gamma3-HF130_81H07] MedHO1202D2_env_samples_DQ203530 gi|77547508|gb|DQ203530| Uncultured bacterium clone MedHO1202D2 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202D2 predicted proteorhodopsin gene, partial cds DQ203530 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATTGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGTTAGTTTTCGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCAGCGAGTCAACAAGCATTCAATACAATCAAATGGATTGTTACTGTTGGTTGGGCCATCTATCCA SYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATTGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGTTAGTTTTCGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCAGCGAGT---CAA---CAA---GCA---TTC---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203445 [I-Gamma3-HF130_81H07] medHO10B10_env_samples_DQ203445 gi|77547338|gb|DQ203445| Uncultured bacterium clone medHO10B10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10B10 predicted proteorhodopsin gene, partial cds DQ203445 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATTGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGTTAGTTTTCGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCAGCGAGTCAACAAGCATTCAATACAATCAAATGGATTGTTACTGTTGGTTGGGCCATCTATCCA RYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATTGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGTTAGTTTTCGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCAGCGAGT---CAA---CAA---GCA---TTC---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203392 [I-Gamma3-HF130_81H07] MedHO102E4_env_samples_DQ203392 gi|77547232|gb|DQ203392| Uncultured bacterium clone MedHO102E4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102E4 predicted proteorhodopsin gene, partial cds DQ203392 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATTGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGTTAGTTTTCGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCAGCGAGTCAACAAGCATTCAATACAATCAAATGGATTGTTACTGTTGGGTGGGCCATCTATCCA RYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATTGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGTTAGTTTTCGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCAGCGAGT---CAA---CAA---GCA---TTC---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203675 [I-Gamma3-HF130_81H07] medHO155B3_env_samples_DQ203675 gi|77547798|gb|DQ203675| Uncultured bacterium clone medHO155B3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155B3 predicted proteorhodopsin gene, partial cds DQ203675 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATTGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGTTAGTTTTCGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCAGCGAGTCAACAAGCATTCAATACAATCAAATGGATTGTTACTGTTGGGTGGGCCATTTATCCA RYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATTGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGTTAGTTTTCGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCAGCGAGT---CAA---CAA---GCA---TTC---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203741 [I-Gamma3-HF130_81H07] SS114a0A4_env_samples_DQ203741 gi|77547930|gb|DQ203741| Uncultured bacterium clone SS114a0A4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0A4 predicted proteorhodopsin gene, partial cds DQ203741 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATTGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGTTAGTTTTCGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCAGCGAGTCAACAAGCATTCAATACAATCAAATGGATTGTTACTGTTGGGTGGGCCATCTACCCA RYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATTGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGTTAGTTTTCGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCAGCGAGT---CAA---CAA---GCA---TTC---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGGTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203676 [I-Gamma3-HF130_81H07] medHO155B5_env_samples_DQ203676 gi|77547800|gb|DQ203676| Uncultured bacterium clone medHO155B5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155B5 predicted proteorhodopsin gene, partial cds DQ203676 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATTGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGTTAGTTTTCGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCAGCGAGTCAACAAGCATTCAATACAATCAAATGGATTGTTACTGTTGGTTGGGCCATCTATCCA RYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATTGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGTTAGTTTTCGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCAGCGAGT---CAA---CAA---GCA---TTC---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203590 [I-Gamma3-HF130_81H07] medHO120A6_env_samples_DQ203590 gi|77547628|gb|DQ203590| Uncultured bacterium clone medHO120A6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120A6 predicted proteorhodopsin gene, partial cds DQ203590 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATTGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGTTAGTTTTCGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCGTGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCAGCGAGTCAACAAGCATTCAATACAATCAAATGGATTGTTACTGTTGGTTGGGCCATTTATCCA RYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATTGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGTTAGTTTTCGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCGTGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCAGCGAGT---CAA---CAA---GCA---TTC---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203528 [I-Gamma3-HF130_81H07] MedHO1202D11_env_samples_DQ203528 gi|77547504|gb|DQ203528| Uncultured bacterium clone MedHO1202D11 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202D11 predicted proteorhodopsin gene, partial cds DQ203528 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCAGCGAGTCAACAAGCATTCAATACAATCAAATGGATTGTTACTGTTGGTTGGGCCATTTATCCA RYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCAGCGAGT---CAA---CAA---GCA---TTC---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203647 [I-Gamma3-HF130_81H07] medHO120G5_env_samples_DQ203647 gi|77547742|gb|DQ203647| Uncultured bacterium clone medHO120G5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120G5 predicted proteorhodopsin gene, partial cds DQ203647 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCAGCGAGTCAACAAGCATTCAATACAATCAAATGGATTGTTACTGTTGGTTGGGCCATTTATCCA RYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCAGCGAGT---CAA---CAA---GCA---TTC---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203548 [I-Gamma3-HF130_81H07] MedHO1202E9_env_samples_DQ203548 gi|77547544|gb|DQ203548| Uncultured bacterium clone MedHO1202E9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202E9 predicted proteorhodopsin gene, partial cds DQ203548 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCAGCGAGTCAACAAGCATTCAATACAATCAAATGGATTGTTACTGTTGGGTGGGCCATCTATCCA RYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCAGCGAGT---CAA---CAA---GCA---TTC---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203457 [I-Gamma3-HF130_81H07] medHO10C7_env_samples_DQ203457 gi|77547362|gb|DQ203457| Uncultured bacterium clone medHO10C7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10C7 predicted proteorhodopsin gene, partial cds DQ203457 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCTGTAGCTGCGATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCGGCGAGTCAACAAGCATTCAATACAATCAAATGGATTGTTACTGTTGGTTGGGCCATCTATCCA RYIDWLITVPLQIIEFYLVIAAVAAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCT---------GTA---GCTGCGATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCGGCGAGT---CAA---CAA---GCA---TTC---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-AAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203732 [I-Gamma3-HF130_81H07] medHO155H6_env_samples_DQ203732 gi|77547912|gb|DQ203732| Uncultured bacterium clone medHO155H6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155H6 predicted proteorhodopsin gene, partial cds DQ203732 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACCGCTGCGGCAAACGCTGGAAGTGGAAATGCGGCGAGTCAACAAGCATTCAATACAATCAAATGGATTGTTACTGTTGGTTGGGCCATCTATCCA SYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACCGCTGCGGCAAACGCTGGA------AGT---GGAAATGCGGCGAGT---CAA---CAA---GCA---TTC---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203588 [I-Gamma3-HF130_81H07] medHO120A4_env_samples_DQ203588 gi|77547624|gb|DQ203588| Uncultured bacterium clone medHO120A4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120A4 predicted proteorhodopsin gene, partial cds DQ203588 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTACATTGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCTGTAACTGCAATTTCTGCAGCTATTCTCTGGAAGCTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCGGCGAGTCAACAAGCATTCAATACAATCAAATGGATTGTTACTGTTGGTTGGGCCATTTATCCA RYIDWLITVPLQIIEFYLVIAAVTAISAAILWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATTGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------CTCTGGAAG---CTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCGGCGAGT---CAA---CAA---GCA---TTC---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------LWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203390 [I-Gamma3-HF130_81H07] MedHO102E2_env_samples_DQ203390 gi|77547228|gb|DQ203390| Uncultured bacterium clone MedHO102E2 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102E2 predicted proteorhodopsin gene, partial cds DQ203390 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATAGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCGGCGAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACTGTTGGTTGGGCGATATATCCA SYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATAGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCGGCGAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCGATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203670 [I-Gamma3-HF130_81H07] medHO155A8_env_samples_DQ203670 gi|77547788|gb|DQ203670| Uncultured bacterium clone medHO155A8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155A8 predicted proteorhodopsin gene, partial cds DQ203670 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATAGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCGGCGAGTCAACAAGCATTCAATACAATCAAATGGATTGTTACTGTTGGTTGGGCCATTTATCCA SYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATAGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCGGCGAGT---CAA---CAA---GCA---TTC---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203477 [I-Gamma3-HF130_81H07] medHO10F8_env_samples_DQ203477 gi|77547402|gb|DQ203477| Uncultured bacterium clone medHO10F8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10F8 predicted proteorhodopsin gene, partial cds DQ203477 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATAGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGAAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAACGCTGAAAGTGGAAATGCGGCGAGTCAACAAGCATTCAATACAATCAAATGGATTGTTACTGTTGGTTGGGCCATCTATCCA RYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLEETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANAESGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGAAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAACGCTGAA------AGT---GGAAATGCGGCGAGT---CAA---CAA---GCA---TTC---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLEE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAE--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203674 [I-Gamma3-HF130_81H07] medHO155B2_env_samples_DQ203674 gi|77547796|gb|DQ203674| Uncultured bacterium clone medHO155B2 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155B2 predicted proteorhodopsin gene, partial cds DQ203674 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCGGCGAGTCAACAAGCATTCAATACAATCAAATGGATTGTTACTGTTGGTTGGGCCATTTATCCA RYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCGGCGAGT---CAA---CAA---GCA---TTC---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203582 [I-Gamma3-HF130_81H07] medHO1203_env_samples_DQ203582 gi|77547612|gb|DQ203582| Uncultured bacterium clone medHO1203 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO1203 predicted proteorhodopsin gene, partial cds DQ203582 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTACATTGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCGGCGAGTCAACAAGCATTCAATACAATCAAATGGATTGTTACTGTTGGTTGGGCAATATATCCA RYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATTGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCGGCGAGT---CAA---CAA---GCA---TTC---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203725 [I-Gamma3-HF130_81H07] medHO155G6_env_samples_DQ203725 gi|77547898|gb|DQ203725| Uncultured bacterium clone medHO155G6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155G6 predicted proteorhodopsin gene, partial cds DQ203725 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTACATTGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCGGCGAGTCAACAAGCATTCAATACAATCAAATGGATTGTTACTGTTGGTTGGGCAATCTATCCA RYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATTGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCGGCGAGT---CAA---CAA---GCA---TTC---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203578 [I-Gamma3-HF130_81H07] MedHO1202H6_env_samples_DQ203578 gi|77547604|gb|DQ203578| Uncultured bacterium clone MedHO1202H6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202H6 predicted proteorhodopsin gene, partial cds DQ203578 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTCGGAGAAACAGGATTAGTGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCGGCGAGTCAACAAGCATTCAATACAATCAAATGGATTGTTACTGTTGGTTGGGCAATATATCCA RYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLVNVTVGFVIGMVAWLYIIYEIFLGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTCGGAGAA---------ACA------------------GGA------TTA---------------------------------GTG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCGGCGAGT---CAA---CAA---GCA---TTC---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------V----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203698 [I-Gamma3-HF130_81H07] medHO155D5_env_samples_DQ203698 gi|77547844|gb|DQ203698| Uncultured bacterium clone medHO155D5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155D5 predicted proteorhodopsin gene, partial cds DQ203698 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCGGCGAGTCAACAAGCATTCAATACAATCAAATGGATTGTTACTGTTGGTTGGGCAATTTATCCA RYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCGGCGAGT---CAA---CAA---GCA---TTC---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203724 [I-Gamma3-HF130_81H07] medHO155G5_env_samples_DQ203724 gi|77547896|gb|DQ203724| Uncultured bacterium clone medHO155G5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155G5 predicted proteorhodopsin gene, partial cds DQ203724 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCGGCGAGTCAACAAGCATTCAATACAATCAAATGGATTGTTACTGTTGGTTGGGCAATTTATCCA RYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCGGCGAGT---CAA---CAA---GCA---TTC---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203716 [I-Gamma3-HF130_81H07] medHO155F7_env_samples_DQ203716 gi|77547880|gb|DQ203716| Uncultured bacterium clone medHO155F7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155F7 predicted proteorhodopsin gene, partial cds DQ203716 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCTGTAACTGCGATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCGGCGAGTCAACAAGCATTCAATACAATCAAATGGATTGTTACTGTTGGTTGGGCAATTTATCCA RYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCT---------GTA---ACTGCGATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCGGCGAGT---CAA---CAA---GCA---TTC---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203426 [I-Gamma3-HF130_81H07] MedHO102H5_env_samples_DQ203426 gi|77547300|gb|DQ203426| Uncultured bacterium clone MedHO102H5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102H5 predicted proteorhodopsin gene, partial cds DQ203426 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCGGCGAGTCAACAAGCATTCAATACAATCAAATGGATTGTTACTGTTGGTTGGGCCATATATCCA SYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCGGCGAGT---CAA---CAA---GCA---TTC---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203585 [I-Gamma3-HF130_81H07] medHO120A11_env_samples_DQ203585 gi|77547618|gb|DQ203585| Uncultured bacterium clone medHO120A11 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120A11 predicted proteorhodopsin gene, partial cds DQ203585 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCGGCGAGTCAACAAGCATTCAATACAATCAAATGGATTGTTACTGTTGGTTGGGCCATTTATCCA RYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCGGCGAGT---CAA---CAA---GCA---TTC---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203635 [I-Gamma3-HF130_81H07] medHO120F4_env_samples_DQ203635 gi|77547718|gb|DQ203635| Uncultured bacterium clone medHO120F4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120F4 predicted proteorhodopsin gene, partial cds DQ203635 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCGGCGAGTCAACAAGCATTCAATACAATCAAATGGATTGTTACTGTTGGTTGGGCCATTTATCCA RYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCGGCGAGT---CAA---CAA---GCA---TTC---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203697 [I-Gamma3-HF130_81H07] medHO155D4_env_samples_DQ203697 gi|77547842|gb|DQ203697| Uncultured bacterium clone medHO155D4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155D4 predicted proteorhodopsin gene, partial cds DQ203697 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCGGCGAGTCAACAAGCATTCAATACAATCAAATGGATTGTTACTGTTGGTTGGGCCATTTATCCA RYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCGGCGAGT---CAA---CAA---GCA---TTC---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203652 [I-Gamma3-HF130_81H07] medHO120H11_env_samples_DQ203652 gi|77547752|gb|DQ203652| Uncultured bacterium clone medHO120H11 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120H11 predicted proteorhodopsin gene, partial cds DQ203652 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCGGCGAGTCAACAAGCATTCAATACAATCAAATGGATTGTTACTGTTGGTTGGGCCATTTATCCA RYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCGGCGAGT---CAA---CAA---GCA---TTC---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203370 [I-Gamma3-HF130_81H07] MedHO102C6_env_samples_DQ203370 gi|77547188|gb|DQ203370| Uncultured bacterium clone MedHO102C6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102C6 predicted proteorhodopsin gene, partial cds DQ203370 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCGGCGAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACTGTTGGTTGGGCAATATACCCA RYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCGGCGAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCAATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203555 [I-Gamma3-HF130_81H07] MedHO1202F6_env_samples_DQ203555 gi|77547558|gb|DQ203555| Uncultured bacterium clone MedHO1202F6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202F6 predicted proteorhodopsin gene, partial cds DQ203555 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCGGCGAGTCAACAAGCATTCAATACAATCAAATGGATTGTTACTGTTGGTTGGGCAATATACCCA RYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCGGCGAGT---CAA---CAA---GCA---TTC---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCAATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203625 [I-Gamma3-HF130_81H07] medHO120E2_env_samples_DQ203625 gi|77547698|gb|DQ203625| Uncultured bacterium clone medHO120E2 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120E2 predicted proteorhodopsin gene, partial cds DQ203625 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCGGCGAGTCAACAAGCATTCAATACAATCAAATGGATTGTTACTGTTGGTTGGGCAATTTACCCA SYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCGGCGAGT---CAA---CAA---GCA---TTC---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203376 [I-Gamma3-HF130_81H07] MedHO102D11_env_samples_DQ203376 gi|77547200|gb|DQ203376| Uncultured bacterium clone MedHO102D11 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102D11 predicted proteorhodopsin gene, partial cds DQ203376 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCGGCGAGTCAACAAGCATTCAATACAATCAAATGGACTGTTACTGTTGGTTGGGCAATCTACCCA RYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANAGSGNAASQQAFNTIKWTVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCGGCGAGT---CAA---CAA---GCA---TTC---AAT---ACAATC---AAATGGACTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWTVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203498 [I-Gamma3-HF130_81H07] MedHO1202A5_env_samples_DQ203498 gi|77547444|gb|DQ203498| Uncultured bacterium clone MedHO1202A5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202A5 predicted proteorhodopsin gene, partial cds DQ203498 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGCTAGTTTCCGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCGGCGAGTCAACAAGCATTCAATACAATCAAATGGATTGTTACTGTTGGTTGGGCAATCTACCCA RYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVSGYLGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGCTAGTTTCCGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCGGCGAGT---CAA---CAA---GCA---TTC---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVSGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203550 [I-Gamma3-HF130_81H07] MedHO1202F10_env_samples_DQ203550 gi|77547548|gb|DQ203550| Uncultured bacterium clone MedHO1202F10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202F10 predicted proteorhodopsin gene, partial cds DQ203550 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGTTACATTGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAACGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCGGCGAGTCAACAAGCATTCAATACAATCAAATGGATTGTTACTGTTGGTTGGGCCATTTACCCA SYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGTVAWLYIIYEIFLGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTTACATTGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAACGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCGGCGAGT---CAA---CAA---GCA---TTC---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGTVAWLYIIYEI-----F--L-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203663 [I-Gamma3-HF130_81H07] medHO155A12_env_samples_DQ203663 gi|77547774|gb|DQ203663| Uncultured bacterium clone medHO155A12 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155A12 predicted proteorhodopsin gene, partial cds DQ203663 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCGGCGAGTCAACAAGCATTCAATACAATCAAATGGATTGTTACTGTTGGTTGGGCCATTTACCCA RYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCGGCGAGT---CAA---CAA---GCA---TTC---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203713 [I-Gamma3-HF130_81H07] medHO155F4_env_samples_DQ203713 gi|77547874|gb|DQ203713| Uncultured bacterium clone medHO155F4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155F4 predicted proteorhodopsin gene, partial cds DQ203713 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCGGCGAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACTGTTGGTTGGGCCATCTACCCA RYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCGGCGAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203534 [I-Gamma3-HF130_81H07] MedHO1202D7_env_samples_DQ203534 gi|77547516|gb|DQ203534| Uncultured bacterium clone MedHO1202D7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202D7 predicted proteorhodopsin gene, partial cds DQ203534 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCGGCGAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACTGTTGGTTGGGCCATATATCCA RYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCGGCGAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203714 [I-Gamma3-HF130_81H07] medHO155F5_env_samples_DQ203714 gi|77547876|gb|DQ203714| Uncultured bacterium clone medHO155F5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155F5 predicted proteorhodopsin gene, partial cds DQ203714 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCGGCGAGTCAACAAGCATTCAATACAATCAAATGGATTGTTACTGTTGGTTGGGCCATATACCCA RYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCGGCGAGT---CAA---CAA---GCA---TTC---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCCATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203505 [I-Gamma3-HF130_81H07] MedHO1202B11_env_samples_DQ203505 gi|77547458|gb|DQ203505| Uncultured bacterium clone MedHO1202B11 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202B11 predicted proteorhodopsin gene, partial cds DQ203505 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTACATTGATTGGCTTATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCTATTGTGATGTTAGTTTTTGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATTATTTATGAGATTTTCTTTGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCAGCGAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACTGTTGGTTGGGCCATATATCCA RYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFFGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATTGATTGG------------------------CTTATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCTATTGTGATGTTAGTTTTTGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATTATTTATGAGATT---------------TTC------TTT---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCAGCGAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--F-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203660 [I-Gamma3-HF130_81H07] medHO1552_env_samples_DQ203660 gi|77547768|gb|DQ203660| Uncultured bacterium clone medHO1552 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO1552 predicted proteorhodopsin gene, partial cds DQ203660 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTTATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCTATTGTGATGTTAGTTTTTGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATTATTTATGAGATTTTCTTTGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCAGCGAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACTGTTGGTTGGGCCATATATCCA RYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFFGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTTATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCTATTGTGATGTTAGTTTTTGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATTATTTATGAGATT---------------TTC------TTT---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCAGCGAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--F-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203626 [I-Gamma3-HF130_81H07] medHO120E3_env_samples_DQ203626 gi|77547700|gb|DQ203626| Uncultured bacterium clone medHO120E3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120E3 predicted proteorhodopsin gene, partial cds DQ203626 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTTATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCTATTGTGATGTTAGTTTTTGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATTATTTATGAGATTTTCTTTGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCAGCGAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACTGTTGGTTGGGCCATTTATCCA RYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFFGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTTATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCTATTGTGATGTTAGTTTTTGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATTATTTATGAGATT---------------TTC------TTT---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCAGCGAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--F-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ422459 [I-Gamma3-HF130_81H07] clone_med-tb04-50m-b10_DQ422459 gi|90024438|gb|DQ422459| Uncultured bacterium clone med-tb04-50m-b10 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-b10 putative proteorhodopsin gene, partial cds. DQ422459 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTTATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCTATTGTGATGTTAGTTTTTGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATTATTTATGAGATTTTCTTTGGAGAAACTGCCGCGGCAAACGCTGGAAGTGGAAATGCAGCGAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACTGTTGGTTGGGCTATTTATCCA RYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFFGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTTATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCTATTGTGATGTTAGTTTTTGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATTATTTATGAGATT---------------TTC------TTT---GGAGAAACTGCCGCGGCAAACGCTGGA------AGT---GGAAATGCAGCGAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACTGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--F-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_EU079198 [I-Gamma3-HF130_81H07] NASB_54_env_samples_EU079198 gi|156106556|gb|EU079198| Uncultured organism clone NASB 54 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 54 putative proteorhodopsin gene, partial cds EU079198 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGCTATGTCGACTGGTTAATAACAGTACCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCAGTAACTGCAATTTCAGCAGCTATATTCTGGAAGCTTTTAATTGCTTCCATAGTGATGCTAGTTTTTGGTTATTTAGGCGAAACGGGATTAATGAATGTCACTGTTGGTTTCGTAATTGGTATGGTCGCTTGGCTATACATAATTTATGAAATTTTCTTTGGAGAAACAGCCGCGGCCAATGCTTCAAGTGGAAACGCTGCTAGTCAACAAGCATTTAACACAATCAAATGGATTGTTACTGTAGGATGGGCCATTTAT RYVDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFFGETAAANASSGNAASQQAFNTIKWIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTATGTCGACTGG------------------------TTAATAACAGTACCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCA---------GTA---ACTGCAATTTCAGCA---GCTATA------------------------------------TTCTGGAAG---CTTTTAATTGCTTCCATAGTGATGCTAGTTTTTGGTTATTTAGGCGAA---------ACG------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTGTTGGT---TTCGTAATTGGTATGGTCGCTTGGCTATACATAATTTATGAAATT---------------TTC------TTT---GGAGAAACAGCCGCGGCCAATGCTTCA------AGT---GGAAACGCTGCTAGT---CAA---CAA---GCA---TTT---AAC---ACAATC---AAATGGATTGTTACTGTA---------------------------------------------------------------GGATGG---------GCCATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--F-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_EU079221 [I-Gamma3-HF130_81H07] NASB_87_env_samples_EU079221 gi|156106601|gb|EU079221| Uncultured organism clone NASB 87 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 87 putative proteorhodopsin gene, partial cds EU079221 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGCTACATTGACTGGTTAATAACAGTACCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCAGTAACTGCAATTTCAGCAGCTATATTCTGGAAGCTTTTAATTGCTTCCATAGTGATGCTAGTTTTTGGTTATTTAGGCGAAACGGGATTAATGAATGTCACTGTTGGTTTCGTAATTGGTATGGTCGCTTGGCTATACATAATTTATGAAATTTTCTTTGGAGAAACAGCCGCGGCCAATGCTTCAAGTGGAAACGCTGCTAGTCAACAAGCATTTAACACAATCAAATGGATTGTTACTGTAGGCTGGGCAATATAC RYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFFGETAAANASSGNAASQQAFNTIKWIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTACATTGACTGG------------------------TTAATAACAGTACCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCA---------GTA---ACTGCAATTTCAGCA---GCTATA------------------------------------TTCTGGAAG---CTTTTAATTGCTTCCATAGTGATGCTAGTTTTTGGTTATTTAGGCGAA---------ACG------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTGTTGGT---TTCGTAATTGGTATGGTCGCTTGGCTATACATAATTTATGAAATT---------------TTC------TTT---GGAGAAACAGCCGCGGCCAATGCTTCA------AGT---GGAAACGCTGCTAGT---CAA---CAA---GCA---TTT---AAC---ACAATC---AAATGGATTGTTACTGTA---------------------------------------------------------------GGCTGG---------GCAATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--F-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_EU079218 [I-Gamma3-HF130_81H07] NASB_83_env_samples_EU079218 gi|156106595|gb|EU079218| Uncultured organism clone NASB 83 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 83 putative proteorhodopsin gene, partial cds EU079218 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGCTATATTGATTGGTTAATAACAGTACCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCAGTAACTGCAATTTCAGCAGCTATATTCTGGAAGCTTTTAATTGCTTCCATAGTGATGCTAGTTTTTGGTTATTTAGGCGAAACGGGATTAATGAATGTCACTGTTGGTTTCGTAATTGGTATGGTCGCTTGGCTATACATAATTTATGAAATTTTCTTTGGAGAAACAGCCGCGGCCAATGCTTCAAGTGGAAACGCTGCTAGTCAACAAGCATTTAACACAATCAAATGGATTGTTACTGTAGGCTGGGCAATTTAC RYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFFGETAAANASSGNAASQQAFNTIKWIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTATATTGATTGG------------------------TTAATAACAGTACCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCA---------GTA---ACTGCAATTTCAGCA---GCTATA------------------------------------TTCTGGAAG---CTTTTAATTGCTTCCATAGTGATGCTAGTTTTTGGTTATTTAGGCGAA---------ACG------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTGTTGGT---TTCGTAATTGGTATGGTCGCTTGGCTATACATAATTTATGAAATT---------------TTC------TTT---GGAGAAACAGCCGCGGCCAATGCTTCA------AGT---GGAAACGCTGCTAGT---CAA---CAA---GCA---TTT---AAC---ACAATC---AAATGGATTGTTACTGTA---------------------------------------------------------------GGCTGG---------GCAATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--F-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ062281 [I-Gamma3-HF130_81H07] MEDPR79_env_samples_DQ062281 gi|67483507|gb|DQ062281| Uncultured bacterium clone MEDPR79 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR79 proteorhodopsin gene, partial cds DQ062281 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na AGATACATTGACTGGCTAATAACAGTACCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCAGTAACTGCAATTTCAGCAGCTATATTCTGGAAGCTTTTAATAGCTTCCATAGTGATGCTAGTTTTTGGTTATTTAGGCGAAACGGGATTAATGAATGTCACTGTTGGCTTCGTAATTGGTATGGTCGCTTGGCTATATATAATTTATGAAATTTTCTTTGGAGAAACTGCCGCGGCCAACGCTTCAAGTGGAAACGCTGCTAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACCGTAGGTTGGGCTATATACCCA RYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFFGETAAANASSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTAATAACAGTACCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCA---------GTA---ACTGCAATTTCAGCA---GCTATA------------------------------------TTCTGGAAG---CTTTTAATAGCTTCCATAGTGATGCTAGTTTTTGGTTATTTAGGCGAA---------ACG------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTGTTGGC---TTCGTAATTGGTATGGTCGCTTGGCTATATATAATTTATGAAATT---------------TTC------TTT---GGAGAAACTGCCGCGGCCAACGCTTCA------AGT---GGAAACGCTGCTAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACCGTA---------------------------------------------------------------GGTTGG---------GCTATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--F-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203608 [I-Gamma3-HF130_81H07] medHO120C7_env_samples_DQ203608 gi|77547664|gb|DQ203608| Uncultured bacterium clone medHO120C7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120C7 predicted proteorhodopsin gene, partial cds DQ203608 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGACTGGTTAATAACAGTACCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCAGTAACTGCAATTTCAGCAGCTATATTCTGGAAGCTTTTAATAGCTTCCATAGTGATGCTAGTTTTTGGTTATTTAGGCGAAACGGGATTAATGAATGTCACTGTTGGTTTCGTAATTGGTATGGTCGCTTGGCTATATATAATTTATGAAATTTTCTTTGGAGAAACTGCCGCGGCCAACGCTTCAAGTGGAAACGCTGCTAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACCGTAGGCTGGGCAATATATCCA SYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFFGETAAANASSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGACTGG------------------------TTAATAACAGTACCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCA---------GTA---ACTGCAATTTCAGCA---GCTATA------------------------------------TTCTGGAAG---CTTTTAATAGCTTCCATAGTGATGCTAGTTTTTGGTTATTTAGGCGAA---------ACG------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTGTTGGT---TTCGTAATTGGTATGGTCGCTTGGCTATATATAATTTATGAAATT---------------TTC------TTT---GGAGAAACTGCCGCGGCCAACGCTTCA------AGT---GGAAACGCTGCTAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACCGTA---------------------------------------------------------------GGCTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--F-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ062286 [I-Gamma3-HF130_81H07] MEDPR84_env_samples_DQ062286 gi|67483517|gb|DQ062286| Uncultured bacterium clone MEDPR84 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR84 proteorhodopsin gene, partial cds DQ062286 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na AGGTACATAGACTGGCTAATAACAGTACCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCAGTAACTGCAATTTCAGCAGCTATATTCTGGAAGCTTTTAATAGCTTCCATAGTGATGCTAGTTTTTGGTTATTTAGGCGAAACGGGATTAATGAATGTCACTGTTGGTTTCGTAATTGGTATGGTCGCTTGGCTATATATAATTTATGAAATTTTCTTTGGAGAAGCTGCCGCGGCCAACGCTTCAAGTGGAAACGCTGCTAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACCGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFFGEAAAANASSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATAGACTGG------------------------CTAATAACAGTACCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCA---------GTA---ACTGCAATTTCAGCA---GCTATA------------------------------------TTCTGGAAG---CTTTTAATAGCTTCCATAGTGATGCTAGTTTTTGGTTATTTAGGCGAA---------ACG------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTGTTGGT---TTCGTAATTGGTATGGTCGCTTGGCTATATATAATTTATGAAATT---------------TTC------TTT---GGAGAAGCTGCCGCGGCCAACGCTTCA------AGT---GGAAACGCTGCTAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACCGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--F-GEAAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ062279 [I-Gamma3-HF130_81H07] MEDPR77C3_env_samples_DQ062279 gi|67483503|gb|DQ062279| Uncultured bacterium clone MEDPR77C3 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR77C3 proteorhodopsin gene, partial cds DQ062279 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na AGCTACATAGATTGGCTAATAACAGTACCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCAGTAACTGCAATTTCAGCAGCTATATTCTGGAAGCTTTTAATAGCTTCCATAGTGATGCTAGTTTTTGGTTATTTAGGCGAAACGGGATTAATGAATGTCACTGTTGGTTTCGTAATTGGTATGGTCGCTTGGCTATATATAATTTATGAAATTTTCTTTGGAAAAACTGCCGCGGCCAACGCTTCAAGTGGAAACGCTGCTAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACCGTAGGTTGGGCTATTTACCCA SYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFFGKTAAANASSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATAGATTGG------------------------CTAATAACAGTACCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCA---------GTA---ACTGCAATTTCAGCA---GCTATA------------------------------------TTCTGGAAG---CTTTTAATAGCTTCCATAGTGATGCTAGTTTTTGGTTATTTAGGCGAA---------ACG------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTGTTGGT---TTCGTAATTGGTATGGTCGCTTGGCTATATATAATTTATGAAATT---------------TTC------TTT---GGAAAAACTGCCGCGGCCAACGCTTCA------AGT---GGAAACGCTGCTAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACCGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--F-GKTAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ422517 [I-Gamma3-HF130_81H07] clone_med-tb04-50m-f9_DQ422517 gi|90024554|gb|DQ422517| Uncultured bacterium clone med-tb04-50m-f9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-f9 putative proteorhodopsin gene, partial cds. DQ422517 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTAATTACAGTGCCTTTACAAATAATTGAGTTCTATTTAGTTGTTGCTGCGGTAACTACTATTAGTGCAATTATATTCTGGAAGCTATTGATTGCTTCAATATTAATGTTGGTCTTTGGTTATCTTGGTGAAACTGGTCTTATGGACGTCACGATTGGTTGGATCCTTGGGATGATCGCTTGGTTCTACATTATTTATGAAATTTTCTTCGGTGAGACTGCTGCTGCCAATGCAGGAAGTGGAAACGCTGCAAGTCAACAAGCTTTTAACACCATCAAATGGATTGTAACTGTTGGTTGGGCTATTTATCCA RYIDWLITVPLQIIEFYLVVAAVTTISAIIFWKLLIASILMLVFGYLGETGLMDVTIGWILGMIAWFYIIYEIFFGETAAANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACAGTGCCTTTACAAATAATTGAGTTCTATTTAGTTGTTGCTGCG---------GTA---ACTACTATTAGTGCA---ATTATA------------------------------------TTCTGGAAG---CTATTGATTGCTTCAATATTAATGTTGGTCTTTGGTTATCTTGGTGAA---------ACT------------------GGT------CTT---------------------------------ATG------------------------------------------------------------------GACGTC------------------ACGATTGGT---TGGATCCTTGGGATGATCGCTTGGTTCTACATTATTTATGAAATT---------------TTC------TTC---GGTGAGACTGCTGCTGCCAATGCAGGA------AGT---GGAAACGCTGCAAGT---CAA---CAA---GCT---TTT---AAC---ACCATC---AAATGGATTGTAACTGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLVVAA---V-TTISA-II------------FWK-LLIASILMLVFGYLGE---T------G--L-----------M----------------------DV------TIG-WILGMIAWFYIIYEI-----F--F-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_DQ203321 [I-Gamma3-HF130_81H07] SS114a80E10_env_samples_DQ203321 gi|77547090|gb|DQ203321| Uncultured bacterium clone SS114a80E10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a80E10 predicted proteorhodopsin gene, partial cds DQ203321 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_80m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_2003 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATACATTGATTGGCTAATTACAGTGCCTTTACAAATAATTGAATTCTATTTGATTGTTGCTGCGGTAACGACAATTAGTGCAATTATTTTCTGGAAGCTCTTAACTGCTTCAATATTAATGTTAGTCTTTGGTTACCTAGGAGAAACTGGTCTTATGGACGTCACGATCGGTTGGGTTTTAGGAATGATCGCTTGGCTTTACATTATTTATGAAATATTCTTCGGCGAAACTGCTGCTGCAAATGCGGGAAGTGGTAATGCCGCAAGTCAACAAGCTTTTACAACCATTAAATGGATTGTAACTGTTGGGTGGGCCATATACCCA RYIDWLITVPLQIIEFYLIVAAVTTISAIIFWKLLTASILMLVFGYLGETGLMDVTIGWVLGMIAWLYIIYEIFFGETAAANAGSGNAASQQAFTTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATTGATTGG------------------------CTAATTACAGTGCCTTTACAAATAATTGAATTCTATTTGATTGTTGCTGCG---------GTA---ACGACAATTAGTGCA---ATTATT------------------------------------TTCTGGAAG---CTCTTAACTGCTTCAATATTAATGTTAGTCTTTGGTTACCTAGGAGAA---------ACT------------------GGT------CTT---------------------------------ATG------------------------------------------------------------------GACGTC------------------ACGATCGGT---TGGGTTTTAGGAATGATCGCTTGGCTTTACATTATTTATGAAATA---------------TTC------TTC---GGCGAAACTGCTGCTGCAAATGCGGGA------AGT---GGTAATGCCGCAAGT---CAA---CAA---GCT---TTT---ACA---ACCATT---AAATGGATTGTAACTGTT---------------------------------------------------------------GGGTGG---------GCCATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLIVAA---V-TTISA-II------------FWK-LLTASILMLVFGYLGE---T------G--L-----------M----------------------DV------TIG-WVLGMIAWLYIIYEI-----F--F-GETAAANAG--S-GNAAS-Q-Q-A-F-T-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_EF107106 [I-Gamma3-HF130_81H07] HF130_81H07_genomic_EF107106 gi|119713395|gb|EF107106| Uncultured marine bacterium HF130 81H07 genomic sequence Uncultured marine bacterium HF130 81H07 genomic sequence EF107106 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:415448 genomic_DNA other 02APR2008 #na North_Pacific_Subtropical_Gyre/Hawaii_Ocean_Time_Series_Station_ALOHA/130m_below_sea_surface Pacific Ocean marine 22.75 -158 Proteorhodopsin photosystem gene clusters exhibit coevolutionary trends and shared ancestry among diverse marine microbial phyla McCarren,J. and DeLong,E.F. Environ. Microbiol. 9 (4), 846858 (2007) 17359257 #na ATGGAATATGTTCTAGCTACTAACGATTATGTTGGTATTTCTTTTTGGCTAGCCACAGCTATAATGCTTGCTTCTACTGTATTTTTCTTCATTGAAAGATCTGACGTTAAAGGTAAGTGGAAAACTTCTTTGACTGTTGCAGGTTTAGTTACTGGTATAGCCTTTTGGCATTATTTGTACATGAGAGACGTGTGGGTAATGGTTGGTGATACACCTACTGTTTACCGATACATTGATTGGTTAATTACCGTTCCTCTTCAAATAATTGAATTTTATTTAGTTATTGCTGCTGTTACAGCAATTAGCGCTGCCATTTTCTGGAAGCTTCTAACTGCATCAATTGTGATGTTAGTTTTTGGATATCTAGGAGAAACTGGATTAATGGATGTAACTCTTGGTTGGGTGATTGGAATGATCGCTTGGCTTTACATCATTTATGAAATTTTCTTTGGTGAAACTGCTGCTGCTAATGCTGGAAGTGGAAACGCAGCCAGTCAGCAAGCATTTACAACAATTAAATGGATTGTAACTGTAGGTTGGGCAATTTACCCATTGGGATATGCAATTGGATATTTCGGTGGCGGAGTAGATGCTAATTCATTGAATATTATCTACAACTTGGCTGATTTAATTAACAAAACAGCATTTGGTTTAGCTATCTGGGCTGCTGCTAAAGCAGATTCAGAAGCTTCCTACGCT MEYVLATNDYVGISFWLATAIMLASTVFFFIERSDVKGKWKTSLTVAGLVTGIAFWHYLYMRDVWVMVGDTPTVYRYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLTASIVMLVFGYLGETGLMDVTLGWVIGMIAWLYIIYEIFFGETAAANAGSGNAASQQAFTTIKWIVTVGWAIYPLGYAIGYFGGGVDANSLNIIYNLADLINKTAFGLAIWAAAKADSEASYA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGAATATGTTCTAGCTACTAACGATTATGTTGGTATTTCTTTTTGGCTAGCCACAGCTATAATGCTTGCTTCTACTGTATTTTTCTTCATTGAAAGATCTGACGTTAAAGGT---AAGTGGAAAACTTCTTTGACTGTTGCAGGTTTAGTTACTGGTATAGCCTTTTGGCATTATTTGTACATGAGAGACGTGTGGGTA---------------------------------------------------ATGGTTGGTGATACACCTACTGTTTACCGATACATTGATTGG------------------------TTAATTACCGTTCCTCTTCAAATAATTGAATTTTATTTAGTTATTGCTGCT---------GTT---ACAGCAATTAGCGCT---GCCATT------------------------------------TTCTGGAAG---CTTCTAACTGCATCAATTGTGATGTTAGTTTTTGGATATCTAGGAGAA---------ACT------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------GATGTA------------------ACTCTTGGT---TGGGTGATTGGAATGATCGCTTGGCTTTACATCATTTATGAAATT---------------TTC------TTT---GGTGAAACTGCTGCTGCTAATGCTGGA------AGT---GGAAACGCAGCCAGT---CAG---CAA---GCA---TTT---ACA---ACAATT---AAATGGATTGTAACTGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCATTGGGATATGCAATTGGATATTTC---------------------------------------GGTGGCGGAGTAGATGCTAATTCATTGAATATTATCTACAACTTGGCTGATTTAATTAACAAAACAGCATTTGGTTTAGCTATCTGGGCTGCTGCTAAAGCAGATTCAGAAGCTTCCTACGCT------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------MEYVLATNDYVGISFWLATAIMLASTVFFFIERSDVKG-KWKTSLTVAGLVTGIAFWHYLYMRDVWV-----------------MVGDTPTVYRYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLTASIVMLVFGYLGE---T------G--L-----------M----------------------DV------TLG-WVIGMIAWLYIIYEI-----F--F-GETAAANAG--S-GNAAS-Q-Q-A-F-T-TI-KWIVTV---------------------GW---AIYPLGYAIGYF-------------GGGVDANSLNIIYNLADLINKTAFGLAIWAAAKADSEASYA------------------------------------ [I-Gamma3-HF130_81H07]_EF107101 [I-Gamma3-HF130_81H07] HF10_05C07_genomic_EF107101 gi|119713211|gb|EF107101| Uncultured marine bacterium HF10 05C07 genomic sequence Uncultured marine bacterium HF10 05C07 genomic sequence EF107101 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:415443 genomic_DNA other 02APR2008 #na North_Pacific_Subtropical_Gyre/Hawaii_Ocean_Time_Series_Station_ALOHA/10m_below_sea_surface Pacific Ocean marine 22.75 -158 Proteorhodopsin photosystem gene clusters exhibit coevolutionary trends and shared ancestry among diverse marine microbial phyla McCarren,J. and DeLong,E.F. Environ. Microbiol. 9 (4), 846858 (2007) 17359257 #na ATGGAATATGTTCTAGCTACCAACGATTATGTTGGTATTTCTTTTTGGCTAGCCACAGCTATAATGCTTGCTTCTACTGTATTTTTCTTTATTGAAAGATCTGACGTTAAAGGTAAGTGGAAAACTTCTTTGACTGTTGCAGGTTTAGTTACTGGTATAGCTTTTTGGCATTATTTGTATATGAGAGACGTATGGGTAATGGTTGGTGATACACCTACTGTTTACCGATACATCGATTGGTTAATTACCGTACCTCTACAAATAATTGAATTTTATTTAGTTATTGCTGCTGTTACAGCAATTAGCGCTGCCATCTTTTGGAAGCTTTTAACTGCATCAATTGTGATGCTTGTTTTTGGTTATCTCGGAGAAACTGGATTAATGGATGTAACTCTTGGTTGGGTGATCGGAATGATTGCTTGGCTATACATCATTTATGAAATCTTCTTTGGAGAAACTGCTAAAGCTAATGCCGGAAGTGGAAATGCAGCCAGTCAACAAGCATTTACAACAATTAAATGGATTGTGACTGTAGGTTGGGCAATATACCCATTGGGATATGCAATTGGATATTTCGGTGGCGGAGTAGATGCTAATTCATTGAATATTATCTACAACTTGGCTGACTTAATTAACAAAACAGCATTTGGTTTAGCTATCTGGGCTGCTGCTAAAGCAGATTCAGAAAGTTCCTACGCT MEYVLATNDYVGISFWLATAIMLASTVFFFIERSDVKGKWKTSLTVAGLVTGIAFWHYLYMRDVWVMVGDTPTVYRYIDWLITVPLQIIEFYLVIAAVTAISAAIFWKLLTASIVMLVFGYLGETGLMDVTLGWVIGMIAWLYIIYEIFFGETAKANAGSGNAASQQAFTTIKWIVTVGWAIYPLGYAIGYFGGGVDANSLNIIYNLADLINKTAFGLAIWAAAKADSESSYA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGAATATGTTCTAGCTACCAACGATTATGTTGGTATTTCTTTTTGGCTAGCCACAGCTATAATGCTTGCTTCTACTGTATTTTTCTTTATTGAAAGATCTGACGTTAAAGGT---AAGTGGAAAACTTCTTTGACTGTTGCAGGTTTAGTTACTGGTATAGCTTTTTGGCATTATTTGTATATGAGAGACGTATGGGTA---------------------------------------------------ATGGTTGGTGATACACCTACTGTTTACCGATACATCGATTGG------------------------TTAATTACCGTACCTCTACAAATAATTGAATTTTATTTAGTTATTGCTGCT---------GTT---ACAGCAATTAGCGCT---GCCATC------------------------------------TTTTGGAAG---CTTTTAACTGCATCAATTGTGATGCTTGTTTTTGGTTATCTCGGAGAA---------ACT------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------GATGTA------------------ACTCTTGGT---TGGGTGATCGGAATGATTGCTTGGCTATACATCATTTATGAAATC---------------TTC------TTT---GGAGAAACTGCTAAAGCTAATGCCGGA------AGT---GGAAATGCAGCCAGT---CAA---CAA---GCA---TTT---ACA---ACAATT---AAATGGATTGTGACTGTA---------------------------------------------------------------GGTTGG---------GCAATATACCCATTGGGATATGCAATTGGATATTTC---------------------------------------GGTGGCGGAGTAGATGCTAATTCATTGAATATTATCTACAACTTGGCTGACTTAATTAACAAAACAGCATTTGGTTTAGCTATCTGGGCTGCTGCTAAAGCAGATTCAGAAAGTTCCTACGCT------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------MEYVLATNDYVGISFWLATAIMLASTVFFFIERSDVKG-KWKTSLTVAGLVTGIAFWHYLYMRDVWV-----------------MVGDTPTVYRYIDW--------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLTASIVMLVFGYLGE---T------G--L-----------M----------------------DV------TLG-WVIGMIAWLYIIYEI-----F--F-GETAKANAG--S-GNAAS-Q-Q-A-F-T-TI-KWIVTV---------------------GW---AIYPLGYAIGYF-------------GGGVDANSLNIIYNLADLINKTAFGLAIWAAAKADSESSYA------------------------------------ [I-Gamma3-b]_DQ062247 [I-Gamma3-b] MEDPR10C07_env_samples_DQ062247 gi|67483439|gb|DQ062247| Uncultured bacterium clone MEDPR10C07 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR10C07 proteorhodopsin gene, partial cds DQ062247 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na CGGTACATTGATTGGCTAATTACTGTACCGCTACAAATAATTGAATTTTATTTAATTATCGCTGCGGTTACTGCTATTAGTTCAGCTGTTTTCTGGAAACTCCTTATTGCTTCTCTAGTCATGCTTATCGGTGGTTTCATCGGTGAAGCTGGTTTAGGCGATGTCGTAGTATGGTGGATTGTTGGAATGATTGCTTGGCTTTACATCATTTATGAAATCTTTTTGGGTGAAACTGCAAAAGCAAACGCTGGCAGTGGAAACGCAGCAAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACTGTAGGTTGGGCCATATACCCA RYIDWLITVPLQIIEFYLIIAAVTAISSAVFWKLLIASLVMLIGGFIGEAGLGDVVVWWIVGMIAWLYIIYEIFLGETAKANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTACATTGATTGG------------------------CTAATTACTGTACCGCTACAAATAATTGAATTTTATTTAATTATCGCTGCG---------GTT---ACTGCTATTAGTTCA---GCTGTT------------------------------------TTCTGGAAA---CTCCTTATTGCTTCTCTAGTCATGCTTATCGGTGGTTTCATCGGTGAA---------GCT------------------GGT------TTA---------------------------------GGC------------------------------------------------------------------GATGTC------------------GTAGTATGG---TGGATTGTTGGAATGATTGCTTGGCTTTACATCATTTATGAAATC---------------TTT------TTG---GGTGAAACTGCAAAAGCAAACGCTGGC------AGT---GGAAACGCAGCAAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLIIAA---V-TAISS-AV------------FWK-LLIASLVMLIGGFIGE---A------G--L-----------G----------------------DV------VVW-WIVGMIAWLYIIYEI-----F--L-GETAKANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-b]_EU079189 [I-Gamma3-b] NASB_24_env_samples_EU079189 gi|156106538|gb|EU079189| Uncultured organism clone NASB 24 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 24 putative proteorhodopsin gene, partial cds EU079189 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGGTATATTGATTGGTTAATTACTGTACCGCTACAAATAATTGAATTTTATTTAATTATCGCTGCGGTTACTGCTATTAGTTCAGCTGTTTTCTGGAAACTCCTTATTGCTTCTCTAGTCATGCTTATCGGTGGTTTCATCGGTGAAGCTGGTTTAGGCGATGTCGTAGTATGGTGGATTGTTGGAATGATCGCTTGGCTTTACATCATTTATGAAATCTTTTTGGGTGAAACTGCAAAAGCAAACGCTGGCAGTGGAAACGCGGCAAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACTGTAGGCTGGGCAATATAC RYIDWLITVPLQIIEFYLIIAAVTAISSAVFWKLLIASLVMLIGGFIGEAGLGDVVVWWIVGMIAWLYIIYEIFLGETAKANAGSGNAASQQAFNTIKWIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTATATTGATTGG------------------------TTAATTACTGTACCGCTACAAATAATTGAATTTTATTTAATTATCGCTGCG---------GTT---ACTGCTATTAGTTCA---GCTGTT------------------------------------TTCTGGAAA---CTCCTTATTGCTTCTCTAGTCATGCTTATCGGTGGTTTCATCGGTGAA---------GCT------------------GGT------TTA---------------------------------GGC------------------------------------------------------------------GATGTC------------------GTAGTATGG---TGGATTGTTGGAATGATCGCTTGGCTTTACATCATTTATGAAATC---------------TTT------TTG---GGTGAAACTGCAAAAGCAAACGCTGGC------AGT---GGAAACGCGGCAAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACTGTA---------------------------------------------------------------GGCTGG---------GCAATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLIIAA---V-TAISS-AV------------FWK-LLIASLVMLIGGFIGE---A------G--L-----------G----------------------DV------VVW-WIVGMIAWLYIIYEI-----F--L-GETAKANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [I-Gamma3-b]_DQ062268 [I-Gamma3-b] MEDPR60H11_env_samples_DQ062268 gi|67483481|gb|DQ062268| Uncultured bacterium clone MEDPR60H11 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR60H11 proteorhodopsin gene, partial cds DQ062268 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na AGGTACATTGATTGGCTAATTACTGTACCACTACAAATAATTGAATTTTATTTAATTATCGCTGCGGTTACTGCTATTAGTTCAGCAGTTTTCTGGAAACTCCTTATTGCTTCTCTAGTCATGCTTATCGGTGGTTTCATCGGTGAAGCTGGTTTAGGTGATGTCGTTGTATGGTGGGTTGTTGGAATGATCGCTTGGCTTTACATCATTTATGAAATCTTTTTGGGTGAAACTGCAAAAGCAAACGCTGGCAGTGGAAACGCAGCAAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACTGTAGGGTGGGCCATTTACCCA RYIDWLITVPLQIIEFYLIIAAVTAISSAVFWKLLIASLVMLIGGFIGEAGLGDVVVWWVVGMIAWLYIIYEIFLGETAKANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATTGATTGG------------------------CTAATTACTGTACCACTACAAATAATTGAATTTTATTTAATTATCGCTGCG---------GTT---ACTGCTATTAGTTCA---GCAGTT------------------------------------TTCTGGAAA---CTCCTTATTGCTTCTCTAGTCATGCTTATCGGTGGTTTCATCGGTGAA---------GCT------------------GGT------TTA---------------------------------GGT------------------------------------------------------------------GATGTC------------------GTTGTATGG---TGGGTTGTTGGAATGATCGCTTGGCTTTACATCATTTATGAAATC---------------TTT------TTG---GGTGAAACTGCAAAAGCAAACGCTGGC------AGT---GGAAACGCAGCAAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACTGTA---------------------------------------------------------------GGGTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLIIAA---V-TAISS-AV------------FWK-LLIASLVMLIGGFIGE---A------G--L-----------G----------------------DV------VVW-WVVGMIAWLYIIYEI-----F--L-GETAKANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-b]_EU079178 [I-Gamma3-b] NASB_26_env_samples_EU079178 gi|156106516|gb|EU079178| Uncultured organism clone NASB 26 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 26 putative proteorhodopsin gene, partial cds EU079178 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGTTACGTTGACTGGTTAATTACTGTACCGCTACAAATAATTGAATTTTATTTAATTATCGCTGCGGTTACTGCTATTAGTTCAGCTGTTTTCTGGAAACTCCTTATTGCTTCTCTAGTCATGCTTATCGGTGGTTTCATCGGTGAAGCTGGTTTAGGCGATGTCGTAGTATGGTGGATTGTTGGAATGATCGCTTGGCTTTACATCATTTATGAAATCTTTTTGGGTGAAACTGCAAAAGCAAACGCTGGCAGTGGAAACGCAGCAAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACTGTAGGATGGGCTATATAT RYVDWLITVPLQIIEFYLIIAAVTAISSAVFWKLLIASLVMLIGGFIGEAGLGDVVVWWIVGMIAWLYIIYEIFLGETAKANAGSGNAASQQAFNTIKWIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTACGTTGACTGG------------------------TTAATTACTGTACCGCTACAAATAATTGAATTTTATTTAATTATCGCTGCG---------GTT---ACTGCTATTAGTTCA---GCTGTT------------------------------------TTCTGGAAA---CTCCTTATTGCTTCTCTAGTCATGCTTATCGGTGGTTTCATCGGTGAA---------GCT------------------GGT------TTA---------------------------------GGC------------------------------------------------------------------GATGTC------------------GTAGTATGG---TGGATTGTTGGAATGATCGCTTGGCTTTACATCATTTATGAAATC---------------TTT------TTG---GGTGAAACTGCAAAAGCAAACGCTGGC------AGT---GGAAACGCAGCAAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACTGTA---------------------------------------------------------------GGATGG---------GCTATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LITVPLQIIEFYLIIAA---V-TAISS-AV------------FWK-LLIASLVMLIGGFIGE---A------G--L-----------G----------------------DV------VVW-WIVGMIAWLYIIYEI-----F--L-GETAKANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [I-Gamma3-b]_EU079190 [I-Gamma3-b] NASB_32_env_samples_EU079190 gi|156106540|gb|EU079190| Uncultured organism clone NASB 32 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 32 putative proteorhodopsin gene, partial cds EU079190 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) unknown (R105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGCTACGTTGACTGGTTAATTACTGTACCGCTACGAATAATTGAATTTTATTTAATTATCGCTGCGGTTACTGCTATTAGTTCAGCTGTTTTCTGGAAACTCCTTATTGCTTCTCTAGTCATGCTTATCGGTGGTTTCATCGGTGAAGCTGGTTTAGGCGATGTCGTAGTATGGTGGATTGTTGGAATGATTGCTTGGCTTTACATCATTTATGAAATTTTTTTGGGTGAAACTGCAAAAGCAAACGCTGGCAGTGGAAACGCAGCAAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACTGTAGGCTGGGCAATCTAT RYVDWLITVPLRIIEFYLIIAAVTAISSAVFWKLLIASLVMLIGGFIGEAGLGDVVVWWIVGMIAWLYIIYEIFLGETAKANAGSGNAASQQAFNTIKWIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTACGTTGACTGG------------------------TTAATTACTGTACCGCTACGAATAATTGAATTTTATTTAATTATCGCTGCG---------GTT---ACTGCTATTAGTTCA---GCTGTT------------------------------------TTCTGGAAA---CTCCTTATTGCTTCTCTAGTCATGCTTATCGGTGGTTTCATCGGTGAA---------GCT------------------GGT------TTA---------------------------------GGC------------------------------------------------------------------GATGTC------------------GTAGTATGG---TGGATTGTTGGAATGATTGCTTGGCTTTACATCATTTATGAAATT---------------TTT------TTG---GGTGAAACTGCAAAAGCAAACGCTGGC------AGT---GGAAACGCAGCAAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACTGTA---------------------------------------------------------------GGCTGG---------GCAATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LITVPLRIIEFYLIIAA---V-TAISS-AV------------FWK-LLIASLVMLIGGFIGE---A------G--L-----------G----------------------DV------VVW-WIVGMIAWLYIIYEI-----F--L-GETAKANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [I-Gamma3-b]_DQ203610 [I-Gamma3-b] medHO120C9_env_samples_DQ203610 gi|77547668|gb|DQ203610| Uncultured bacterium clone medHO120C9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120C9 predicted proteorhodopsin gene, partial cds DQ203610 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGTTAATTACTGTACCGCTACAAATAATTGAATTTTATTTAATTATCGCTGCGGTTACTGCTATTAGTTCAGCTGTTTTCTGGAAACTCCTTATTGCTTCTCTAGTCATGCTTATCGGTGGTTTCATCGGTGAAGCTGGTTTAGGCGATGTCGTAGTATGGTGGATTGTTGGAATGATTGCTTGGCTTTACATCATTTATGAAATCTTTTTGGGTGAAACTGCAAAAGCAAACGCTGGCAGTGGAAACGCAGCAAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACTGTAGGTTGGGCCATCTATCCA RYIDWLITVPLQIIEFYLIIAAVTAISSAVFWKLLIASLVMLIGGFIGEAGLGDVVVWWIVGMIAWLYIIYEIFLGETAKANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------TTAATTACTGTACCGCTACAAATAATTGAATTTTATTTAATTATCGCTGCG---------GTT---ACTGCTATTAGTTCA---GCTGTT------------------------------------TTCTGGAAA---CTCCTTATTGCTTCTCTAGTCATGCTTATCGGTGGTTTCATCGGTGAA---------GCT------------------GGT------TTA---------------------------------GGC------------------------------------------------------------------GATGTC------------------GTAGTATGG---TGGATTGTTGGAATGATTGCTTGGCTTTACATCATTTATGAAATC---------------TTT------TTG---GGTGAAACTGCAAAAGCAAACGCTGGC------AGT---GGAAACGCAGCAAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLIIAA---V-TAISS-AV------------FWK-LLIASLVMLIGGFIGE---A------G--L-----------G----------------------DV------VVW-WIVGMIAWLYIIYEI-----F--L-GETAKANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-b]_DQ062265 [I-Gamma3-b] MEDPR49C08_env_samples_DQ062265 gi|67483475|gb|DQ062265| Uncultured bacterium clone MEDPR49C08 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR49C08 proteorhodopsin gene, partial cds DQ062265 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na ATGGGAGAAATATTAGCTGTTGACGATTACGTAGGTATATCGTTTTGGTTAGCTGCCGCAATAATGTTAGCTTCGACTGTTTTCTTTTTTGTAGAGAGATCAGACGTGCCAGTAAAATGGAAAACATCTTTGACGGTTGCTGGTTTGGTTACGGGTGTAGCTTTTTGGCACTACCTCTATATGAGAGGTGTCTGGATTTACGCAGGTGAGACTCCAACAGTTTTCAGATACATTGACTGGTTAATTACTGTACCGCTACAAATAATTGAATTTTATTTAATTATCGCTGCGGTTACTGCTATTAGTTCAGCTGTTTTCTGGAAACTCCTTATTGCTTCTCTAGTCATGCTTATCGGTGGTTTCATCGGTGAAGCTGGTTTAGGCGATGTCGTAGTATGGTGGATTGTTGGAATGATCGCTTGGCTTTACATCATTTATGAAATCTTTTTGGGTGAAACTGCAAAAGCAAACGCTGGCAGTGGAAACGCAGCAAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACTGTAGGTTGGGCAATTTACCCAATCGGTTATGCTTGGGGTTACTTCGGAGATGGCTTAAATGAAGATGCTCTCAATATTGTTTATAACTTAGCAGATTTGATCAACAAAGCTGCCTTCGGTTTAGCAATATGGGCTGCTGCTATGAAAGATAAAGAAACAAGCACCAGTCACGCT MGEILAVDDYVGISFWLAAAIMLASTVFFFVERSDVPVKWKTSLTVAGLVTGVAFWHYLYMRGVWIYAGETPTVFRYIDWLITVPLQIIEFYLIIAAVTAISSAVFWKLLIASLVMLIGGFIGEAGLGDVVVWWIVGMIAWLYIIYEIFLGETAKANAGSGNAASQQAFNTIKWIVTVGWAIYPIGYAWGYFGDGLNEDALNIVYNLADLINKAAFGLAIWAAAMKDKETSTSHA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGAGAAATATTAGCTGTTGACGATTACGTAGGTATATCGTTTTGGTTAGCTGCCGCAATAATGTTAGCTTCGACTGTTTTCTTTTTTGTAGAGAGATCAGACGTGCCAGTA---AAATGGAAAACATCTTTGACGGTTGCTGGTTTGGTTACGGGTGTAGCTTTTTGGCACTACCTCTATATGAGAGGTGTCTGGATT------------------------------TACGCA---------------------GGTGAGACTCCAACAGTTTTCAGATACATTGACTGG------------------------TTAATTACTGTACCGCTACAAATAATTGAATTTTATTTAATTATCGCTGCG---------GTT---ACTGCTATTAGTTCA---GCTGTT------------------------------------TTCTGGAAA---CTCCTTATTGCTTCTCTAGTCATGCTTATCGGTGGTTTCATCGGTGAA---------GCT------------------GGT------TTA---------------------------------GGC------------------------------------------------------------------GATGTC------------------GTAGTATGG---TGGATTGTTGGAATGATCGCTTGGCTTTACATCATTTATGAAATC---------------TTT------TTG---GGTGAAACTGCAAAAGCAAACGCTGGC------AGT---GGAAACGCAGCAAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCAATTTACCCAATCGGTTATGCTTGGGGTTACTTCGGA---GATGGC---------------------------TTAAATGAAGATGCTCTCAATATTGTTTATAACTTAGCAGATTTGATCAACAAAGCTGCCTTCGGTTTAGCAATATGGGCTGCTGCTATGAAAGATAAAGAAACA---AGCACCAGTCACGCT------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------MGEILAVDDYVGISFWLAAAIMLASTVFFFVERSDVPV-KWKTSLTVAGLVTGVAFWHYLYMRGVWI----------YA-------GETPTVFRYIDW--------LITVPLQIIEFYLIIAA---V-TAISS-AV------------FWK-LLIASLVMLIGGFIGE---A------G--L-----------G----------------------DV------VVW-WIVGMIAWLYIIYEI-----F--L-GETAKANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYPIGYAWGYFG-DG---------LNEDALNIVYNLADLINKAAFGLAIWAAAMKDKET-STSHA------------------------------------ [I-Gamma3-b]_DQ062253 [I-Gamma3-b] MEDPR17_env_samples_DQ062253 gi|67483451|gb|DQ062253| Uncultured bacterium clone MEDPR17 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR17 proteorhodopsin gene, partial cds DQ062253 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na CGATACATAGACTGGCTAATTACTGTACCGCTACAAATAATTGAATTTTATTTAATTATCGCTGCGGTTACTGCTATTAGTTCAGCTGTTTTCTGGAAACTCCTTATTGCTTCTCTAGTCATGCTTATCGGTGGTTTCATCGGTGAAGCTGGTTTAGGCGATGTCGTAGTATGGTGGATTGTTGGAATGATTGCTTGGCTTTACATCATTTATGAAATCTTTTTGGGTGAAACTGCAAAAGCAAACGCTGGCAGTGGAAACGCAGCAAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIIEFYLIIAAVTAISSAVFWKLLIASLVMLIGGFIGEAGLGDVVVWWIVGMIAWLYIIYEIFLGETAKANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATAGACTGG------------------------CTAATTACTGTACCGCTACAAATAATTGAATTTTATTTAATTATCGCTGCG---------GTT---ACTGCTATTAGTTCA---GCTGTT------------------------------------TTCTGGAAA---CTCCTTATTGCTTCTCTAGTCATGCTTATCGGTGGTTTCATCGGTGAA---------GCT------------------GGT------TTA---------------------------------GGC------------------------------------------------------------------GATGTC------------------GTAGTATGG---TGGATTGTTGGAATGATTGCTTGGCTTTACATCATTTATGAAATC---------------TTT------TTG---GGTGAAACTGCAAAAGCAAACGCTGGC------AGT---GGAAACGCAGCAAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLIIAA---V-TAISS-AV------------FWK-LLIASLVMLIGGFIGE---A------G--L-----------G----------------------DV------VVW-WIVGMIAWLYIIYEI-----F--L-GETAKANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-b]_DQ062269 [I-Gamma3-b] MEDPR63_env_samples_DQ062269 gi|67483483|gb|DQ062269| Uncultured bacterium clone MEDPR63 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR63 proteorhodopsin gene, partial cds DQ062269 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na CGATACATAGACTGGCTAATTACTGTACCGCTACAAATAATTGAATTTTATTTAATTATCGCTGCGGTTACTGCTATTAGTTCAGCTGTTTTCTGGAAACTCCTTATTGCTTCTCTAGTCATGCTTATCGGTGGTTTCATCGGTGAAGCTGGTTTAGGCGATGTCGTAGTATGGTGGATTGTTGGAATGATTGCTTGGCTTTACATCATTTATGAAATCTTTTTGGGTGAAACTGCAAAAGCAAACGCTGGCAGTGGAAACGCAGCAAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIIEFYLIIAAVTAISSAVFWKLLIASLVMLIGGFIGEAGLGDVVVWWIVGMIAWLYIIYEIFLGETAKANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATAGACTGG------------------------CTAATTACTGTACCGCTACAAATAATTGAATTTTATTTAATTATCGCTGCG---------GTT---ACTGCTATTAGTTCA---GCTGTT------------------------------------TTCTGGAAA---CTCCTTATTGCTTCTCTAGTCATGCTTATCGGTGGTTTCATCGGTGAA---------GCT------------------GGT------TTA---------------------------------GGC------------------------------------------------------------------GATGTC------------------GTAGTATGG---TGGATTGTTGGAATGATTGCTTGGCTTTACATCATTTATGAAATC---------------TTT------TTG---GGTGAAACTGCAAAAGCAAACGCTGGC------AGT---GGAAACGCAGCAAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLIIAA---V-TAISS-AV------------FWK-LLIASLVMLIGGFIGE---A------G--L-----------G----------------------DV------VVW-WIVGMIAWLYIIYEI-----F--L-GETAKANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-b]_DQ062283 [I-Gamma3-b] MEDPR831_env_samples_DQ062283 gi|67483511|gb|DQ062283| Uncultured bacterium clone MEDPR831 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR831 proteorhodopsin gene, partial cds DQ062283 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na AGATACATAGACTGGCTAATTACTGTACCGCTACAAATAATTGAATTTTATTTAATTATCGCTGCGGTTACTGCTATTAGTTCAGCTGTTTTCTGGAAACTCCTTATTGCTTCTCTAGTCATGCTTATCGGTGGTTTCGTCGGTGAAGCTGGTTTAGGCGATGTCGTAGTATGGTGGATTGTTGGAATGATTGCTTGGCTTTACATCATTTATGAAATCTTTTTGGGTGAAACTGCAAAAGCAAACGCTGGCAGTGGAAACGCAGCAAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIIEFYLIIAAVTAISSAVFWKLLIASLVMLIGGFVGEAGLGDVVVWWIVGMIAWLYIIYEIFLGETAKANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTACCGCTACAAATAATTGAATTTTATTTAATTATCGCTGCG---------GTT---ACTGCTATTAGTTCA---GCTGTT------------------------------------TTCTGGAAA---CTCCTTATTGCTTCTCTAGTCATGCTTATCGGTGGTTTCGTCGGTGAA---------GCT------------------GGT------TTA---------------------------------GGC------------------------------------------------------------------GATGTC------------------GTAGTATGG---TGGATTGTTGGAATGATTGCTTGGCTTTACATCATTTATGAAATC---------------TTT------TTG---GGTGAAACTGCAAAAGCAAACGCTGGC------AGT---GGAAACGCAGCAAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLIIAA---V-TAISS-AV------------FWK-LLIASLVMLIGGFVGE---A------G--L-----------G----------------------DV------VVW-WIVGMIAWLYIIYEI-----F--L-GETAKANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-b]_DQ062271 [I-Gamma3-b] MEDPR65_2_env_samples_DQ062271 gi|67483487|gb|DQ062271| Uncultured bacterium clone MEDPR65 2 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR65 2 proteorhodopsin gene, partial cds DQ062271 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na AGATACATAGACTGGCTAATTACTGTACCGCTACAAATAATTGAATTTTATTTAATTATCGCTGCGGTTACTGCTATTAGTTCAGCTGTTTTCTGGAAACTCCTTATTGCTTCTCTAGTCATGCTTATCGGTGGTTTCATCGGTGAAGCTGGTTTAGGCGATGTCGTAGTATGGTGGATTGTTGGAATGATCGCTTGGCTTTACATCATTTATGAAATCTTTTTGGGTGAGACTGCAAAAGCAAACGCTGGCAGTGGAAACGCAGCAAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACTGTAGGTTGGGCTATTTACCCA RYIDWLITVPLQIIEFYLIIAAVTAISSAVFWKLLIASLVMLIGGFIGEAGLGDVVVWWIVGMIAWLYIIYEIFLGETAKANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTACCGCTACAAATAATTGAATTTTATTTAATTATCGCTGCG---------GTT---ACTGCTATTAGTTCA---GCTGTT------------------------------------TTCTGGAAA---CTCCTTATTGCTTCTCTAGTCATGCTTATCGGTGGTTTCATCGGTGAA---------GCT------------------GGT------TTA---------------------------------GGC------------------------------------------------------------------GATGTC------------------GTAGTATGG---TGGATTGTTGGAATGATCGCTTGGCTTTACATCATTTATGAAATC---------------TTT------TTG---GGTGAGACTGCAAAAGCAAACGCTGGC------AGT---GGAAACGCAGCAAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLIIAA---V-TAISS-AV------------FWK-LLIASLVMLIGGFIGE---A------G--L-----------G----------------------DV------VVW-WIVGMIAWLYIIYEI-----F--L-GETAKANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-b]_DQ062260 [I-Gamma3-b] MEDPR44_env_samples_DQ062260 gi|67483465|gb|DQ062260| Uncultured bacterium clone MEDPR44 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR44 proteorhodopsin gene, partial cds DQ062260 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na AGATACATAGACTGGCTAATTACTGTACCGCTACAAATAATTGAATTTTATTTAATTATCGCTGCGGTTACTGCTATTAGTTCAGCAGTTTTCTGGAAACTCCTTATTGCTTCTCTGATCATGCTTATCGGTGGTTTCATCGGTGAAGCTGGTTTAGGTGATGTCGTTGTATGGTGGGTTGTTGGAATGATCGCTTGGCTTTACATCATTTATGAAATCTTTTTGGGTGAAACTGCAAAAGCAAACGCTGGCAGTGGAAACGCAGCAAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIIEFYLIIAAVTAISSAVFWKLLIASLIMLIGGFIGEAGLGDVVVWWVVGMIAWLYIIYEIFLGETAKANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTACCGCTACAAATAATTGAATTTTATTTAATTATCGCTGCG---------GTT---ACTGCTATTAGTTCA---GCAGTT------------------------------------TTCTGGAAA---CTCCTTATTGCTTCTCTGATCATGCTTATCGGTGGTTTCATCGGTGAA---------GCT------------------GGT------TTA---------------------------------GGT------------------------------------------------------------------GATGTC------------------GTTGTATGG---TGGGTTGTTGGAATGATCGCTTGGCTTTACATCATTTATGAAATC---------------TTT------TTG---GGTGAAACTGCAAAAGCAAACGCTGGC------AGT---GGAAACGCAGCAAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLIIAA---V-TAISS-AV------------FWK-LLIASLIMLIGGFIGE---A------G--L-----------G----------------------DV------VVW-WVVGMIAWLYIIYEI-----F--L-GETAKANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-b]_DQ062266 [I-Gamma3-b] MEDPR51_env_samples_DQ062266 gi|67483477|gb|DQ062266| Uncultured bacterium clone MEDPR51 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR51 proteorhodopsin gene, partial cds DQ062266 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na AGATACATAGACTGGTTAATTACTGTACCGCTACAAATAATTGAATTTTATTTAATTATCGCTGCGGTTACTGCTATTAGTTCAGCAGTTTTCTGGAAACTCCTTATTGCTTCTCTGATCATGCTTATCGGTGGTTTCATCGGTGAAGCTGGTTTAGGTGATGTCGTTGTATGGTGGGTTGTTGGAATGATCGCTTGGCTTTACATCATTTATGAAATCTTTTTGGGTGAAACTGCAAAAGCAAACGCTGGCAGTGGAAACGCAGCAAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACTGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIIEFYLIIAAVTAISSAVFWKLLIASLIMLIGGFIGEAGLGDVVVWWVVGMIAWLYIIYEIFLGETAKANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------TTAATTACTGTACCGCTACAAATAATTGAATTTTATTTAATTATCGCTGCG---------GTT---ACTGCTATTAGTTCA---GCAGTT------------------------------------TTCTGGAAA---CTCCTTATTGCTTCTCTGATCATGCTTATCGGTGGTTTCATCGGTGAA---------GCT------------------GGT------TTA---------------------------------GGT------------------------------------------------------------------GATGTC------------------GTTGTATGG---TGGGTTGTTGGAATGATCGCTTGGCTTTACATCATTTATGAAATC---------------TTT------TTG---GGTGAAACTGCAAAAGCAAACGCTGGC------AGT---GGAAACGCAGCAAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACTGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLIIAA---V-TAISS-AV------------FWK-LLIASLIMLIGGFIGE---A------G--L-----------G----------------------DV------VVW-WVVGMIAWLYIIYEI-----F--L-GETAKANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-b]_DQ339357 [I-Gamma3-b] clone_S-S4OM-C12_DQ339357 gi|85681685|gb|DQ339357| Uncultured bacterium clone S-S4OM-C12 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-C12 predicted proteorhodopsin gene, partial cds. DQ339357 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTAATTACTGTACCGCTACAAATAATTGAATTTTATTTAATTATCGCTGCGGTTACTGCTATTAGTTCAGCTGTTTTCTGGAAACTCCTTATTGCTTCTCTAGTCATGCTTATCGGTGGTTTCATCGGTGAAGCTGGTTTAGGCGATGTCGTAGTATGGTGGATTGTTGGAATGATCGCTTGGCTTTACATCATTTATGAAATCTTTTTGGGTGAAACTGCAAAAGCAAACGCTGGCAGTGGAAACGCAGCAAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACTGTAGGGTGGGCCATTTACCCA RYIDWLITVPLQIIEFYLIIAAVTAISSAVFWKLLIASLVMLIGGFIGEAGLGDVVVWWIVGMIAWLYIIYEIFLGETAKANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTAATTACTGTACCGCTACAAATAATTGAATTTTATTTAATTATCGCTGCG---------GTT---ACTGCTATTAGTTCA---GCTGTT------------------------------------TTCTGGAAA---CTCCTTATTGCTTCTCTAGTCATGCTTATCGGTGGTTTCATCGGTGAA---------GCT------------------GGT------TTA---------------------------------GGC------------------------------------------------------------------GATGTC------------------GTAGTATGG---TGGATTGTTGGAATGATCGCTTGGCTTTACATCATTTATGAAATC---------------TTT------TTG---GGTGAAACTGCAAAAGCAAACGCTGGC------AGT---GGAAACGCAGCAAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACTGTA---------------------------------------------------------------GGGTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLIIAA---V-TAISS-AV------------FWK-LLIASLVMLIGGFIGE---A------G--L-----------G----------------------DV------VVW-WIVGMIAWLYIIYEI-----F--L-GETAKANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-b]_DQ062277 [I-Gamma3-b] MEDPR75G01_env_samples_DQ062277 gi|67483499|gb|DQ062277| Uncultured bacterium clone MEDPR75G01 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR75G01 proteorhodopsin gene, partial cds DQ062277 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na CGCTACATAGATTGGCTAATTACTGTACCGCTACAAATAATTGAATTTTATTTAATTATCGCTGCGGTTACTGCTATTAGTTCAGCTGTTTTCTGGAAACTCCTTATTGCTTCTCTAGTCATGCTTATCGGTGGTTTCATCGGTGAAGCTGGTTTAGGCGATGTCGTAGTATGGTGGATTGTTGGAATGATTGCTTGGCTTTACATCATTTATGAAATCTTTTTGGGTGAAACTGCAAAAGCAAACGCTGGCAGTGGAAACGCAGCAAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACTGTAGGGTGGGCCATTTATCCA RYIDWLITVPLQIIEFYLIIAAVTAISSAVFWKLLIASLVMLIGGFIGEAGLGDVVVWWIVGMIAWLYIIYEIFLGETAKANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTACATAGATTGG------------------------CTAATTACTGTACCGCTACAAATAATTGAATTTTATTTAATTATCGCTGCG---------GTT---ACTGCTATTAGTTCA---GCTGTT------------------------------------TTCTGGAAA---CTCCTTATTGCTTCTCTAGTCATGCTTATCGGTGGTTTCATCGGTGAA---------GCT------------------GGT------TTA---------------------------------GGC------------------------------------------------------------------GATGTC------------------GTAGTATGG---TGGATTGTTGGAATGATTGCTTGGCTTTACATCATTTATGAAATC---------------TTT------TTG---GGTGAAACTGCAAAAGCAAACGCTGGC------AGT---GGAAACGCAGCAAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACTGTA---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLIIAA---V-TAISS-AV------------FWK-LLIASLVMLIGGFIGE---A------G--L-----------G----------------------DV------VVW-WIVGMIAWLYIIYEI-----F--L-GETAKANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-b]_DQ062288 [I-Gamma3-b] MEDPR90_env_samples_DQ062288 gi|67483521|gb|DQ062288| Uncultured bacterium clone MEDPR90 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR90 proteorhodopsin gene, partial cds DQ062288 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na CGATACATAGATTGGCTGATTACTGTTCCGCTTCAAATTATTGAGTTTTATTTAATAATTGCGGCTGTTACAGCAATTAGCTCAGCAGTTTTCTGGAAACTTCTGATTGCATCATTAGTGATGTTGATTGGTGGTTTCATTGGAGAAGCTGGTTTAGGAGATGTCGTTGTATGGTGGATCGTTGGAATGATCGCTTGGCTTTACATCATTTATGAAATCTTTATGGGCGAAACTGCAAAAGCAAACGCTGGCAGTGGAAACGCAGCAAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACAGTAGGTTGGGCTATTTATCCA RYIDWLITVPLQIIEFYLIIAAVTAISSAVFWKLLIASLVMLIGGFIGEAGLGDVVVWWIVGMIAWLYIIYEIFMGETAKANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATAGATTGG------------------------CTGATTACTGTTCCGCTTCAAATTATTGAGTTTTATTTAATAATTGCGGCT---------GTT---ACAGCAATTAGCTCA---GCAGTT------------------------------------TTCTGGAAA---CTTCTGATTGCATCATTAGTGATGTTGATTGGTGGTTTCATTGGAGAA---------GCT------------------GGT------TTA---------------------------------GGA------------------------------------------------------------------GATGTC------------------GTTGTATGG---TGGATCGTTGGAATGATCGCTTGGCTTTACATCATTTATGAAATC---------------TTT------ATG---GGCGAAACTGCAAAAGCAAACGCTGGC------AGT---GGAAACGCAGCAAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLIIAA---V-TAISS-AV------------FWK-LLIASLVMLIGGFIGE---A------G--L-----------G----------------------DV------VVW-WIVGMIAWLYIIYEI-----F--M-GETAKANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-b]_DQ203820 [I-Gamma3-b] SS114a40D5_env_samples_DQ203820 gi|77548088|gb|DQ203820| Uncultured bacterium clone SS114a40D5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40D5 predicted proteorhodopsin gene, partial cds DQ203820 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTGATAACTGTTCCGCTTCAAATTATTGAGTTTTATTTAATAATTGCGGCTGTTACAGCAATTAGCTCAGCAGTTTTCTGGAAACTTCTGATTGCATCATTAGTGATGTTGATTGGTGGTTTCATTGGAGAAGCTGGTTTAGGAGATGTCGTTGTATGGTGGATCGTTGGAATGATCGCTTGGCTTTACATCATTTATGAAATCTTTATGGGTGAAACTGCAAAAGCAAACGCTGGCAGTGGAAACGCAGCAAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACAGTAGGTTGGGCCATATATCCA RYIDWLITVPLQIIEFYLIIAAVTAISSAVFWKLLIASLVMLIGGFIGEAGLGDVVVWWIVGMIAWLYIIYEIFMGETAKANAGSGNAASQQAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTGATAACTGTTCCGCTTCAAATTATTGAGTTTTATTTAATAATTGCGGCT---------GTT---ACAGCAATTAGCTCA---GCAGTT------------------------------------TTCTGGAAA---CTTCTGATTGCATCATTAGTGATGTTGATTGGTGGTTTCATTGGAGAA---------GCT------------------GGT------TTA---------------------------------GGA------------------------------------------------------------------GATGTC------------------GTTGTATGG---TGGATCGTTGGAATGATCGCTTGGCTTTACATCATTTATGAAATC---------------TTT------ATG---GGTGAAACTGCAAAAGCAAACGCTGGC------AGT---GGAAACGCAGCAAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLIIAA---V-TAISS-AV------------FWK-LLIASLVMLIGGFIGE---A------G--L-----------G----------------------DV------VVW-WIVGMIAWLYIIYEI-----F--M-GETAKANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-a]_DQ203650 [I-Gamma3-a] medHO120G9_env_samples_DQ203650 gi|77547748|gb|DQ203650| Uncultured bacterium clone medHO120G9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120G9 predicted proteorhodopsin gene, partial cds DQ203650 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGACTGGTTAATCACAGTTCCACTTCAAATCATTGAGTTTTACTTAATTGTTGCAGCTGTAACAGCGGTAAGCGCAGGCATATTCTGGCGTTTACTTATCGCATCAATAGTAATGCTTGTTGGTGGTTATCTTGGTGAAACTGGACTATGGGCACCTTCAGTAGGTTTTGCTGTTGGAATGATTGCTTGGGTATACATCATCTATGAAATATTTCTTGGTGAGACTGCCGCAGCCAATGCCTCTAGTGGAAACTCTGCAAGTCAAAGCGCATTTAACACGATTAAATGGATTGTAACTGTAGGTTGGGCCATATATCCA SYIDWLITVPLQIIEFYLIVAAVTAVSAGIFWRLLIASIVMLVGGYLGETGLWAPSVGFAVGMIAWVYIIYEIFLGETAAANASSGNSASQSAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGACTGG------------------------TTAATCACAGTTCCACTTCAAATCATTGAGTTTTACTTAATTGTTGCAGCT---------GTA---ACAGCGGTAAGCGCA---GGCATA------------------------------------TTCTGGCGT---TTACTTATCGCATCAATAGTAATGCTTGTTGGTGGTTATCTTGGTGAA---------ACT------------------GGA------CTA---------------------------------TGG------------------------------------------------------------------GCACCT------------------TCAGTAGGT---TTTGCTGTTGGAATGATTGCTTGGGTATACATCATCTATGAAATA---------------TTT------CTT---GGTGAGACTGCCGCAGCCAATGCCTCT------AGT---GGAAACTCTGCAAGT---CAA---AGC---GCA---TTT---AAC---ACGATT---AAATGGATTGTAACTGTA---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIIEFYLIVAA---V-TAVSA-GI------------FWR-LLIASIVMLVGGYLGE---T------G--L-----------W----------------------AP------SVG-FAVGMIAWVYIIYEI-----F--L-GETAAANAS--S-GNSAS-Q-S-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma3-a]_EU915745 [I-Gamma3-a] PF75061_env_samples_EU915745 gi|229358372|gb|EU915745| Uncultured microorganism clone PF75061 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF75061 putative proteorhodopsin gene, partial cds EU915745 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na GTATTAGCGGCTACTGTATTCTTCTTCGTAGAAAGACAAGACGTATCGGGTAAGTGGAGAACTTCTTTAACCGTTGCTGGTCTTGTTACTGGTATTGCGTTCTGGCACTACCTTTACATGAGAGGAATGTGGTCAGATATGGGAGCTTCACCTACGGTATTTAGATACATTGACTGGTTAATCACAGTACCACTTCAAATCATTGAGTTTTACTTAATTGTTGCGGCTGTTACGGTTGTAAGTGCAGGTATATTCTGGCGTTTACTTATCGCATCAATTGTAATGCTTGTTGGTGGTTATCTTGGTGAAACTGGACTATGGGCACCTTCAGTAGGTTTTGCTGTTGGAATGATTGCTTGGATATACATCATTTATGAGATATTTCTTGGTGAGGCTGCTGCAGCCAATGCCTCTAGTGGAAACTCTGCAAGTCAAAGCGCATTTAACACAATTAAATGGATTGTAACTGTAGGATGGGCCATTTAT VLAATVFFFVERQDVSGKWRTSLTVAGLVTGIAFWHYLYMRGMWSDMGASPTVFRYIDWLITVPLQIIEFYLIVAAVTVVSAGIFWRLLIASIVMLVGGYLGETGLWAPSVGFAVGMIAWIYIIYEIFLGEAAAANASSGNSASQSAFNTIKWIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGGCTACTGTATTCTTCTTCGTAGAAAGACAAGACGTATCGGGT---AAGTGGAGAACTTCTTTAACCGTTGCTGGTCTTGTTACTGGTATTGCGTTCTGGCACTACCTTTACATGAGAGGAATGTGGTCA------------------------------GATATG---------------------GGAGCTTCACCTACGGTATTTAGATACATTGACTGG------------------------TTAATCACAGTACCACTTCAAATCATTGAGTTTTACTTAATTGTTGCGGCT---------GTT---ACGGTTGTAAGTGCA---GGTATA------------------------------------TTCTGGCGT---TTACTTATCGCATCAATTGTAATGCTTGTTGGTGGTTATCTTGGTGAA---------ACT------------------GGA------CTA---------------------------------TGG------------------------------------------------------------------GCACCT------------------TCAGTAGGT---TTTGCTGTTGGAATGATTGCTTGGATATACATCATTTATGAGATA---------------TTT------CTT---GGTGAGGCTGCTGCAGCCAATGCCTCT------AGT---GGAAACTCTGCAAGT---CAA---AGC---GCA---TTT---AAC---ACAATT---AAATGGATTGTAACTGTA---------------------------------------------------------------GGATGG---------GCCATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------VLAATVFFFVERQDVSG-KWRTSLTVAGLVTGIAFWHYLYMRGMWS----------DM-------GASPTVFRYIDW--------LITVPLQIIEFYLIVAA---V-TVVSA-GI------------FWR-LLIASIVMLVGGYLGE---T------G--L-----------W----------------------AP------SVG-FAVGMIAWIYIIYEI-----F--L-GEAAAANAS--S-GNSAS-Q-S-A-F-N-TI-KWIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [I-Gamma3-a]_EU915747 [I-Gamma3-a] PF75074_env_samples_EU915747 gi|229358376|gb|EU915747| Uncultured microorganism clone PF75074 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF75074 putative proteorhodopsin gene, partial cds EU915747 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na GTATTAGCGGCTACTGTATTCTTCTTCGTAGAAAGACAAGACGTATCGGGTAAGTGGAGAACTTCTTTAACCGTTGCTGGTCTTGTTACTGGTATTGCGTTCTGGCACTACCTTTACATGAGAGGAATGTGGTCAGATATGGGAGCTTCACCTACGGTATTTAGATACATTGACTGGTTAATCACAGTACCACTTCAAATCATTGAGTTTTACTTAATTGTTGCGGCTGTTACGGTTGTAAGTGCAGGTATATTCTGGCGTTTACTTATCGCATCAATTGTAATGCTTGTTGGTGGTTATCTTGGTGAAACTGGACTATGGGCACCTTCAGTAGGTTTTGCTGTTGGAATGATTGCTTGGATATACATCATTTATGAGATATTTCTTGGTGAGGCTGCTGCAGCCAATGCCTCTAGTGGAAACTCTGCAAGTCAAAGCGCATTTAACACAATTAAATGGATTGTAACTGTAGGATGGGCCATTTAT VLAATVFFFVERQDVSGKWRTSLTVAGLVTGIAFWHYLYMRGMWSDMGASPTVFRYIDWLITVPLQIIEFYLIVAAVTVVSAGIFWRLLIASIVMLVGGYLGETGLWAPSVGFAVGMIAWIYIIYEIFLGEAAAANASSGNSASQSAFNTIKWIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGGCTACTGTATTCTTCTTCGTAGAAAGACAAGACGTATCGGGT---AAGTGGAGAACTTCTTTAACCGTTGCTGGTCTTGTTACTGGTATTGCGTTCTGGCACTACCTTTACATGAGAGGAATGTGGTCA------------------------------GATATG---------------------GGAGCTTCACCTACGGTATTTAGATACATTGACTGG------------------------TTAATCACAGTACCACTTCAAATCATTGAGTTTTACTTAATTGTTGCGGCT---------GTT---ACGGTTGTAAGTGCA---GGTATA------------------------------------TTCTGGCGT---TTACTTATCGCATCAATTGTAATGCTTGTTGGTGGTTATCTTGGTGAA---------ACT------------------GGA------CTA---------------------------------TGG------------------------------------------------------------------GCACCT------------------TCAGTAGGT---TTTGCTGTTGGAATGATTGCTTGGATATACATCATTTATGAGATA---------------TTT------CTT---GGTGAGGCTGCTGCAGCCAATGCCTCT------AGT---GGAAACTCTGCAAGT---CAA---AGC---GCA---TTT---AAC---ACAATT---AAATGGATTGTAACTGTA---------------------------------------------------------------GGATGG---------GCCATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------VLAATVFFFVERQDVSG-KWRTSLTVAGLVTGIAFWHYLYMRGMWS----------DM-------GASPTVFRYIDW--------LITVPLQIIEFYLIVAA---V-TVVSA-GI------------FWR-LLIASIVMLVGGYLGE---T------G--L-----------W----------------------AP------SVG-FAVGMIAWIYIIYEI-----F--L-GEAAAANAS--S-GNSAS-Q-S-A-F-N-TI-KWIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [I-Gamma3-a]_DQ062267 [I-Gamma3-a] MEDPR55G04_env_samples_DQ062267 gi|67483479|gb|DQ062267| Uncultured bacterium clone MEDPR55G04 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR55G04 proteorhodopsin gene, partial cds DQ062267 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na AGGTACATTGATTGGCTAATCACAGTGCCACTTCAAATTATTGAGTTTTACTTAATTGTTGCAGCTGTTACAGCGGTGAGCGCAGGTATATTCTGGCGTTTACTTATCGCATCAATCGTAATGCTTGTTGGTGGTTATCTTGGTGAAACAGGACTATGGGCGCCTTCAGTAGGTTTTGCTGTTGGAATGATTGCTTGGGTATACATCATCTATGAAATATTTCTTGGTGAGACTGCCGCAGCCAATGCCTCTAGTGGAAACTCTGCGAGTCAAAGCGCATTTAACACAATTAAATGGATCGTAACTGTAGGGTGGGCCATTTATCCA RYIDWLITVPLQIIEFYLIVAAVTAVSAGIFWRLLIASIVMLVGGYLGETGLWAPSVGFAVGMIAWVYIIYEIFLGETAAANASSGNSASQSAFNTIKWIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATTGATTGG------------------------CTAATCACAGTGCCACTTCAAATTATTGAGTTTTACTTAATTGTTGCAGCT---------GTT---ACAGCGGTGAGCGCA---GGTATA------------------------------------TTCTGGCGT---TTACTTATCGCATCAATCGTAATGCTTGTTGGTGGTTATCTTGGTGAA---------ACA------------------GGA------CTA---------------------------------TGG------------------------------------------------------------------GCGCCT------------------TCAGTAGGT---TTTGCTGTTGGAATGATTGCTTGGGTATACATCATCTATGAAATA---------------TTT------CTT---GGTGAGACTGCCGCAGCCAATGCCTCT------AGT---GGAAACTCTGCGAGT---CAA---AGC---GCA---TTT---AAC---ACAATT---AAATGGATCGTAACTGTA---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYLIVAA---V-TAVSA-GI------------FWR-LLIASIVMLVGGYLGE---T------G--L-----------W----------------------AP------SVG-FAVGMIAWVYIIYEI-----F--L-GETAAANAS--S-GNSAS-Q-S-A-F-N-TI-KWIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-viral/Himb114]_HQ704806 [I-viral/Himb114] Organic_Lake_phycodnavirus_isolate_OLPV_scf7180000031019_genomic_cds_viral_groupII_HQ704806 gi|322511281|gb|HQ704806| Organic Lake phycodnavirus isolate OLPVscf7180000031019 genomic sequence Organic Lake phycodnavirus isolate OLPVscf7180000031019 genomic sequence HQ704806 [[proteorhodopsin super-cluster I/Viral-like Himb114 Alphaproteobacterial-like cluster]] proteorhodopsin super-cluster I Viral-like Himb114 Alphaproteobacterial-like cluster viral rhodopsin proton pump D97 ; V108 light-energy conversion (ion transport) Blue-Green (M105) [Viruses/dsDNA viruses/no RNA stage/Phycodnaviridae/environmental samples] taxon:938083 genomic_DNA strain 12APR2011 24Dec2006 surface_water_from_Organic_Lake/Vestfold_Hills/East_Antarctica Antarctic Ocean freshwater -68.456371 78.189888 Virophage control of antarctic algal hostvirus dynamics Yau,S., Lauro,F.M., DeMaere,M.Z., Brown,M.V., Thomas,T., Raftery,M.J., AndrewsPfannkoch,C., Lewis,M., Hoffman,J.M., Gibson,J.A. and Cavicchioli,R. Proc. Natl. Acad. Sci. U.S.A. 108 (15), 61636168 (2011) 21444812 acronym: OLPV ATGAGCGATCTGATAGAATATTCGTTTTATTTGACGTATGCGTTTTTAATGACCACTGGCACCATTACGTTCATCGAAGCCCTAAGAACCAAAAACGAATCGGTGCGGCATATATTAAATTTAGAAACATGTATTTCGGTCGTCGCGGCGTTTTTCTATTCGAATTTCATCGGTAAATTAGAACACATCAATTACGAAGAAATAAATTTAAATCGTTATGTAGACTGGGCAATTACCACACCCATTATGTTGTTGGTATTGGTGCTTGCGTTCCGCGTCAATCAAACCAACAAAGCAATGGTCAAATTCAGCGATTTTATGATTATTTTAGGAATGAATTACGGTATGTTGGGTACCGGATATTTGGGAGACATTGGAGTCATTCATAAAACAATGGGTACCGTTTTAGGATTCTTATTTTTTGGTGGATTGTTTTATAAATTAAATACATTGAGAACGTCCAATGCTTCCAATGACTTGTTGTATGGAGCCTTTTTCGTATTATGGGCGCTTTATGGTGTATTTTATCAAATGGAACAATTGCCCAGAAATGTTGGGTATAATGTGTTGGACTTATTTTCCAAGTGTTTTGTGGGTATATATTTTTGGGCGTTTTATGCTAAAATCTTCACT MSDLIEYSFYLTYAFLMTTGTITFIEALRTKNESVRHILNLETCISVVAAFFYSNFIGKLEHINYEEINLNRYVDWAITTPIMLLVLVLAFRVNQTNKAMVKFSDFMIILGMNYGMLGTGYLGDIGVIHKTMGTVLGFLFFGGLFYKLNTLRTSNASNDLLYGAFFVLWALYGVFYQMEQLPRNVGYNVLDLFSKCFVGIYFWAFYAKIFT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAGCGATCTGATAGAATATTCGTTTTATTTGACGTATGCGTTTTTAATGACCACTGGCACCATTACGTTCATCGAAGCCCTAAGAACCAAAAACGAATCGGTGCGGCATATATTAAATTTAGAAACATGTATTTCGGTCGTCGCGGCGTTTTTCTATTCGAATTTCATCGGTAAATTAGAA------------------------------------------------CACATCAATTACGAAGAAATAAATTTAAATCGTTATGTAGACTGG------------------------GCAATTACCACACCCATTATGTTGTTGGTATTGGTGCTTGCGTTCCGCGTC---------AAT------CAAACCAACAAA---GCAATG---------------------GTCAAATTCAGCGATTTTATGATT---ATTTTAGGAATGAATTACGGTATGTTGGGTACCGGATATTTGGGAGAC---------ATT---------------------------------------------------------------------------------------GGA---------GTC---------------------------ATTCATAAA------------------ACAATGGGT---ACCGTTTTAGGATTCTTATTTTTTGGTGGATTGTTTTATAAATTA---------------------------------------AATACATTGAGAACGTCC------------------------------------AAT---GCT---TCC---AAT---GACTTGTTGTATGGAGCCTTTTTCGTA---------------------------------------------------------------TTATGG---------GCGCTTTATGGTGTATTTTATCAAATGGAACAATTGCCC------------------------------------------AGAAATGTTGGGTATAATGTGTTGGACTTATTTTCCAAGTGTTTTGTGGGTATATATTTTTGGGCGTTTTATGCTAAAATCTTCACT------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------MSDLIEYSFYLTYAFLMTTGTITFIEALRTKNESVRHILNLETCISVVAAFFYSNFIGKLE----------------HINYEEINLNRYVDW--------AITTPIMLLVLVLAFRV---N--QTNK-AM-------VKFSDFMI-ILGMNYGMLGTGYLGD---I-----------------------------G---V---------IHK------TMG-TVLGFLFFGGLFYKL-------------NTLRTS------------N-A-S-N-DLLYGAFFV---------------------LW---ALYGVFYQMEQLP--------------RNVGYNVLDLFSKCFVGIYFWAFYAKIFT---------------------------------------------- [I-viral/Himb114]_HQ704807 [I-viral/Himb114] Organic_Lake_phycodnavirus_isolate_OLPV_scf7180000031023_genomic_cds_viral_groupI_HQ704807 gi|322511308|gb|HQ704807| Organic Lake phycodnavirus isolate OLPVscf7180000031023 genomic sequence Organic Lake phycodnavirus isolate OLPVscf7180000031023 genomic sequence HQ704807 [[proteorhodopsin super-cluster I/Viral-like Himb114 Alphaproteobacterial-like cluster]] proteorhodopsin super-cluster I Viral-like Himb114 Alphaproteobacterial-like cluster viral rhodopsin proton pump D97 ; T108 light-energy conversion (ion transport) Blue-Green (M105) [Viruses/dsDNA viruses/no RNA stage/Phycodnaviridae/environmental samples] taxon:938083 genomic_DNA strain 12APR2011 24Dec2006 surface_water_from_Organic_Lake/Vestfold_Hills/East_Antarctica Antarctic Ocean freshwater -68.456371 78.189888 Virophage control of antarctic algal hostvirus dynamics Yau,S., Lauro,F.M., DeMaere,M.Z., Brown,M.V., Thomas,T., Raftery,M.J., AndrewsPfannkoch,C., Lewis,M., Hoffman,J.M., Gibson,J.A. and Cavicchioli,R. Proc. Natl. Acad. Sci. U.S.A. 108 (15), 61636168 (2011) 21444812 acronym: OLPV ATGGATAACATAATAATGACCGCTTATATTTCAATCTTTGTTCAAATCATCACCGCGATTATTTCTGTATACGGTTTATTTATTCCATTGAATTTCAAAGACATTATTTTGCGGGAAATATTGATATTAGAATTAATTGTCCAAATTATTGAATTCATTTTTTATATTTGGCTGATAATTACTTTACAAAGTATAAATGAAGACATTACTTATGTAAGATATTTTGACTGGGTATTAACAACACCCGTGATGCTGTTGACTACGGTGTATTTTTTCGAATATATGAACTCAGATGATGGTATACGAAAAAAAGAAATCAATGACCGAGATTATGTGTATTTATTTTATATATGTTTGTCTAATTTTTTTATGTTGTTAATCGGTTATTTGGGAGAAACAAAACAAATCAATAAAATGCTCACGCTATTTGGTGGTTCTTTTTTTCTTTTCCTTACATTTTATTTGCTGTATGTAAAATATACAAAAGAGAATTGGATGAATTATATTGTTTTCTATTTTATGTTTTTGGTTTGGTTTTTATATGGGTTTGCCTTCATGTTTCCTTTTTCAATAAAAAATCAGATGTATAATATTTTAGATATTGTGTCAAAAAATATATATAGTATATTTATTTTTATAGTGATATTAAATCAAAGTTACAAACTCCTT MDNIIMTAYISIFVQIITAIISVYGLFIPLNFKDIILREILILELIVQIIEFIFYIWLIITLQSINEDITYVRYFDWVLTTPVMLLTTVYFFEYMNSDDGIRKKEINDRDYVYLFYICLSNFFMLLIGYLGETKQINKMLTLFGGSFFLFLTFYLLYVKYTKENWMNYIVFYFMFLVWFLYGFAFMFPFSIKNQMYNILDIVSKNIYSIFIFIVILNQSYKLL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGATAACATAATAATGACCGCTTATATTTCAATCTTTGTTCAAATCATCACCGCGATTATTTCTGTATACGGTTTATTTATTCCATTGAATTTCAAAGACATTATTTTGCGGGAAATATTGATATTAGAATTAATTGTCCAAATTATTGAATTCATTTTTTATATTTGGCTGATAATTACTTTACAA---------------------------------------------------AGTATAAATGAAGACATTACTTATGTAAGATATTTTGACTGG------------------------GTATTAACAACACCCGTGATGCTGTTGACTACGGTGTATTTTTTCGAATAT---------ATG------AACTCAGATGAT---GGTATACGAAAAAAAGAAATCAATGACCGAGATTATGTGTATTTATTTTAT---ATATGTTTGTCTAATTTTTTTATGTTGTTAATCGGTTATTTGGGAGAA---------ACA---------------------------------------------------------------------------------------AAA---------CAA---------------------------ATCAATAAA------------------ATGCTCACG---CTATTTGGTGGTTCTTTTTTTCTTTTCCTTACATTTTATTTGCTG---------------TAT------GTA---AAATATACAAAAGAG------------------------------------------------AAT---TGG---ATG---AAT---TATATTGTTTTCTATTTTATGTTTTTG---------------------------------------------------------------GTTTGG---------TTTTTATATGGGTTTGCCTTCATGTTTCCTTTTTCAATA------------------------------------------AAAAATCAGATGTATAATATTTTAGATATTGTGTCAAAAAATATATATAGTATATTTATTTTTATAGTGATATTAAATCAAAGTTACAAACTCCTT--------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------MDNIIMTAYISIFVQIITAIISVYGLFIPLNFKDIILREILILELIVQIIEFIFYIWLIITLQ-----------------SINEDITYVRYFDW--------VLTTPVMLLTTVYFFEY---M--NSDD-GIRKKEINDRDYVYLFY-ICLSNFFMLLIGYLGE---T-----------------------------K---Q---------INK------MLT-LFGGSFFLFLTFYLL-----Y--V-KYTKE----------------N-W-M-N-YIVFYFMFL---------------------VW---FLYGFAFMFPFSI--------------KNQMYNILDIVSKNIYSIFIFIVILNQSYKLL------------------------------------------- [I-viral/Himb114]_HQ634147 [I-viral/Himb114] Phaeocystis_globosa_virus_12T_viral_groupI_HQ634147 gi|357289534|gb|HQ634147| Phaeocystis globosa virus 12T, 3 unordered pieces Phaeocystis globosa virus 12T, 3 unordered pieces HQ634147 [[proteorhodopsin super-cluster I/Viral-like Himb114 Alphaproteobacterial-like cluster]] proteorhodopsin super-cluster I Viral-like Himb114 Alphaproteobacterial-like cluster viral rhodopsin proton pump D97 ; S108 light-energy conversion (ion transport) Blue-Green (M105) [Viruses/dsDNA viruses/no RNA stage/unclassified dsDNA viruses] taxon:755273 genomic_DNA strain 21-nov-11 05-juil-00 #na North Sea marine 52.98 4.74 The Genome Sequence of Phaeocystis globosa virus 12T Henn,M.R., Brussaard,C., Wommack,E., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. Unpublished #na #na ATGGAAAATAGCTTTATAGTAAAAAATACAATGATTTTCTCATTTTTAATTCAAATTATAACATTAATTATTGGAATTTTTGCACAATTTATAAAAGTTCCCAGACATAAATATATATTAAAAGATGCTTTATTACTTGAAAATATAGTACAATTTATCGAAGCAATATTTTATTTATGGTTTATATATTTTTATAAGGAAAATGTAGATAAAATAGACATCGCTAAATATAGATATTATGATTGGTTCTTAACAACACCAACTATGATATTGTCTGTAATTATATATTTTCATTATAATAATTCAAGCAAAAAAATATATTACAATATGATAACATTCTTTAAACAAGATTTTAGAAAAATACTTGAATTGTGGTTTTATAATTTTAATATGTTAATAATTGGTTATTTACAAGAAATAAATATAATAAGTATTCTTTTATCAACTCTAATAGGATTTTATTTCTTTGGGTTATTATTTTACAAAATGTTTAAATATTATGTGGTTCAAAACAAAAAAAATTATTTATTATTCTTTTTGATGTTTTTTATTTGGGGATTATATGGTATAGCAGCACTATTTAATTATAAATTTAAAAATGCGTTTTATAATATTTTAGATATTTTTTCTAAAAACTTTTTTGGATTATTCTTAGCATATTTAGTATTTACCGGT MENSFIVKNTMIFSFLIQIITLIIGIFAQFIKVPRHKYILKDALLLENIVQFIEAIFYLWFIYFYKENVDKIDIAKYRYYDWFLTTPTMILSVIIYFHYNNSSKKIYYNMITFFKQDFRKILELWFYNFNMLIIGYLQEINIISILLSTLIGFYFFGLLFYKMFKYYVVQNKKNYLLFFLMFFIWGLYGIAALFNYKFKNAFYNILDIFSKNFFGLFLAYLVFTG ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGAAAATAGCTTTATAGTAAAAAATACAATGATTTTCTCATTTTTAATTCAAATTATAACATTAATTATTGGAATTTTTGCACAATTTATAAAAGTTCCCAGACATAAATATATATTAAAAGATGCTTTATTACTTGAAAATATAGTACAATTTATCGAAGCAATATTTTATTTATGGTTTATATATTTTTATAAG---------------------------------------------GAAAATGTAGATAAAATAGACATCGCTAAATATAGATATTATGATTGG------------------------TTCTTAACAACACCAACTATGATATTGTCTGTAATTATATATTTTCATTAT---------AAT---AATTCAAGCAAAAAAATATATTACAATATGATAACATTCTTTAAACAAGATTTTAGAAAAATACTTGAA---TTGTGGTTTTATAATTTTAATATGTTAATAATTGGTTATTTACAAGAA---------ATA---------------------------------------------------------------------------------------AAT---------ATA---------------------------ATAAGTATT------------------CTTTTATCA---ACTCTAATAGGATTTTATTTCTTTGGGTTATTATTTTACAAAATG---------------TTT------AAA---------------------------------------------TATTATGTGGTT---CAA---AAC---AAA---AAA---AAT---TATTTATTATTCTTTTTGATGTTTTTT---------------------------------------------------------------ATTTGG---------GGATTATATGGTATAGCAGCACTATTTAATTATAAATTT------------------------------------------AAAAATGCGTTTTATAATATTTTAGATATTTTTTCTAAAAACTTTTTTGGATTATTCTTAGCATATTTAGTATTTACCGGT------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------MENSFIVKNTMIFSFLIQIITLIIGIFAQFIKVPRHKYILKDALLLENIVQFIEAIFYLWFIYFYK---------------ENVDKIDIAKYRYYDW--------FLTTPTMILSVIIYFHY---N-NSSKKIYYNMITFFKQDFRKILE-LWFYNFNMLIIGYLQE---I-----------------------------N---I---------ISI------LLS-TLIGFYFFGLLFYKM-----F--K---------------YYVV-Q-N-K-K-N-YLLFFLMFF---------------------IW---GLYGIAALFNYKF--------------KNAFYNILDIFSKNFFGLFLAYLVFTG------------------------------------------------ [I-viral/Himb114]_ADAC02000001 [I-viral/Himb114] Alphaproteobacterium_HIMB114_scf_1118435595067_WGS_GG704932 gi|459671622|gb|ADAC02000001| Alpha proteobacterium HIMB114 HIMB114 HIMB114, whole genome shotgun sequence Alpha proteobacterium HIMB114 HIMB114 HIMB114, whole genome shotgun sequence ADAC02000001 [[proteorhodopsin super-cluster I/Viral-like Himb114 Alphaproteobacterial-like cluster]] proteorhodopsin super-cluster I Viral-like Himb114 Alphaproteobacterial-like cluster viral rhodopsin proton pump T97 ; T108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Proteobacteria/Alphaproteobacteria/SAR11 cluster] taxon:684719 genomic_DNA strain 08-mars-13 #na #na Pacific Ocean marine 21.460467 -157.787657 #na #na #na #na #na ATGAATGTATTAGGATTAGTAACATCTTACACTTTTGAGTTTGCTCTTATTACAATGATAGCAGCGACAATTTATTTTTTACTTGAGAGATACAGATTAAGTGACGAATATAAACCAGTTTCAACTTTTGCAATTTTAACTACTTCACTTGCTGTCATCGAGTATTTTAATATGAGAGAGTTTTTTACTATAGAAAACTTATCAAAACCTGATTTAAATTTTCCAACAGAATATAGGTACATAACCTGGTTAATCGCTACACCGATAATGCTTTATACGTATTTTGTTTTAACGAAGCTAAGTAGATACGCAAAACCAATAGTGATTTTAACAATTAGTTTAAATTTTTTAATGATTGTCTCAGGTTATTTTTCAGAAAGTGCATATTCTAATGGTTGGATGCCGATGGTCTCAGGCACTTATGTATTTTCGTATTTTTTATTTGGAGTAGGTATGGCTTGTTGGGTTGGAATTATCTATATCTTTATCAAAGTTTTGCCTGGCCATGTTGTAAAAGTTAATGATCAAAGAAATTCAGATTATTGTTTAAAATGTTTGGGCTTTGTACAAAAATTAATTATTTATGGATGGGCAATTTATCCTTTGGGTCTTTTTGTATCCTTTTGGGATGGTGCATCTGACACTGCTTTAATGAGGGAAATGATTTATAACTTTGGTGACTTGTTTAATAAAGTCGGGTTTGCATTAATTTGTTTTTCTTGTGCAAAAAAACTATCAAAAAAATCT MNVLGLVTSYTFEFALITMIAATIYFLLERYRLSDEYKPVSTFAILTTSLAVIEYFNMREFFTIENLSKPDLNFPTEYRYITWLIATPIMLYTYFVLTKLSRYAKPIVILTISLNFLMIVSGYFSESAYSNGWMPMVSGTYVFSYFLFGVGMACWVGIIYIFIKVLPGHVVKVNDQRNSDYCLKCLGFVQKLIIYGWAIYPLGLFVSFWDGASDTALMREMIYNFGDLFNKVGFALICFSCAKKLSKKS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAATGTATTAGGATTAGTAACATCTTACACTTTTGAGTTTGCTCTTATTACAATGATAGCAGCGACAATTTATTTTTTACTTGAGAGATACAGATTAAGTGACGAATATAAACCAGTTTCAACTTTTGCAATTTTAACTACTTCACTTGCTGTCATCGAGTATTTTAATATGAGAGAGTTTTTTACT---------------------------------ATAGAAAACTTATCAAAACCTGATTTAAATTTTCCAACAGAATATAGGTACATAACCTGG------------------------TTAATCGCTACACCGATAATGCTTTATACGTATTTTGTTTTAACGAAGCTA---------AGT------AGATACGCAAAA---CCAATA------------------------------------GTGATTTTA---ACAATTAGTTTAAATTTTTTAATGATTGTCTCAGGTTATTTTTCAGAA---------AGT---------------------------------------------GCATATTCTAATGGTTGGATGCCG---ATGGTCTCA---GGCACT---------TAT---------------------------GTATTTTCG------------------TATTTTTTA---TTTGGAGTAGGTATGGCTTGTTGGGTTGGAATTATCTATATCTTT---------------ATCAAAGTTTTGCCTGGCCATGTTGTAAAAGTTAATGATCAA------AGA---AATTCAGATTATTGT---TTA---AAA---TGT---TTG---GGC---TTTGTA---CAAAAATTAATTATTTAT---------------------------------------------------------------GGATGG---------GCAATTTATCCTTTGGGTCTTTTTGTATCCTTTTGGGAT------GGT---------GCA---TCTGACACTGCTTTAATGAGGGAAATGATTTATAACTTTGGTGACTTGTTTAATAAAGTCGGGTTTGCATTAATTTGTTTTTCTTGTGCAAAAAAACTATCAAAAAAATCT------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------MNVLGLVTSYTFEFALITMIAATIYFLLERYRLSDEYKPVSTFAILTTSLAVIEYFNMREFFT-----------IENLSKPDLNFPTEYRYITW--------LIATPIMLYTYFVLTKL---S--RYAK-PI------------VIL-TISLNFLMIVSGYFSE---S---------------AYSNGWMP-MVS-GT---Y---------VFS------YFL-FGVGMACWVGIIYIF-----IKVLPGHVVKVNDQ--R-NSDYC-L-K-C-L-G-FV-QKLIIY---------------------GW---AIYPLGLFVSFWD--G---A-SDTALMREMIYNFGDLFNKVGFALICFSCAKKLSKKS-------------------------------------------- [I-viral/Himb114]_DQ203655 [I-viral/Himb114] medHO120H5_env_samples_DQ203655 gi|77547758|gb|DQ203655| Uncultured bacterium clone medHO120H5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120H5 predicted proteorhodopsin gene, partial cds DQ203655 [[proteorhodopsin super-cluster I/Viral-like Himb114 Alphaproteobacterial-like cluster]] proteorhodopsin super-cluster I Viral-like Himb114 Alphaproteobacterial-like cluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATAGATTGGCTTCTTACAGTTCCACTTCAAGTAGTAGAATTCTATCTGATACTTGCTGCTGTGACTGCAGTAAGATCAGCTGTATTTTTTAAATTATTAATCAGCTCGCTTGTAATGCTTATTGCTGGATATTTAGGAGAAGCTGGTATTGCACCAGTTCTACCTGCATTCGTAATAGGTGTAGCAGCTTGGTTGTATATTATTTATGAAATCTTTGCTGGTGAAACTGCAAAAGCAAATTCCGCGAGCGGAAATGCTGCATCACAAACTGCTTTTTCAGCGATGAAATGGATTTTAACTGTTGGCTGGGCAATCTATCCA RYIDWLLTVPLQVVEFYLILAAVTAVRSAVFFKLLISSLVMLIAGYLGEAGIAPVLPAFVIGVAAWLYIIYEIFAGETAKANSASGNAASQTAFSAMKWILTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATAGATTGG------------------------CTTCTTACAGTTCCACTTCAAGTAGTAGAATTCTATCTGATACTTGCTGCT---------GTG---ACTGCAGTAAGATCA---GCTGTA------------------------------------TTTTTTAAA---TTATTAATCAGCTCGCTTGTAATGCTTATTGCTGGATATTTAGGAGAA---------GCT------------------GGT------ATT---------------------------------GCA------------------------------------------------------------------CCAGTT------------------CTACCTGCA---TTCGTAATAGGTGTAGCAGCTTGGTTGTATATTATTTATGAAATC---------------TTT------GCT---GGTGAAACTGCAAAAGCAAATTCCGCG------AGC---GGAAATGCTGCATCA---CAA---ACT---GCT---TTT---TCA---GCGATG---AAATGGATTTTAACTGTT---------------------------------------------------------------GGCTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQVVEFYLILAA---V-TAVRS-AV------------FFK-LLISSLVMLIAGYLGE---A------G--I-----------A----------------------PV------LPA-FVIGVAAWLYIIYEI-----F--A-GETAKANSA--S-GNAAS-Q-T-A-F-S-AM-KWILTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ926148 [I-Firmicutes-Exiguobacterium] BOUM_OTU061_env_samples gb|KJ926148| Uncultured bacterium clone BOUM OTU061 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU061 putative proteorhodopsin gene, partial cds KJ926148 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump D97 ; K108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 34.046 24.49733 #na #na #na #na #na GTTGACTGGCTCTTTACAACGCCCTTAATGCTTATCAAGTTCCCACTCTTACTGAGGCTTGGTGATAAAGGTAAAAAGTTCTTTGTGCAGCTTGTAACCCTTGATATAGGCATGATTGTCTGCGCCTTCATTGCAGAGACTTCACCAGTTGCTTCAACGGAATGGTGGGGCTTCTTTTTGGTTGCATGCGTCCTCGAACTTTTAATTGTTGCGACGCTCTACACTGGCCTTGGGTCCGCCATCAACTCAGCCCCAGCGCCTATCGCTAAAGCACTCAATACAATGAGACTGTTCATTTTGATAGGATGGGCTATTTAT VDWLFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASTEWWGFFLVACVLELLIVATLYTGLGSAINSAPAPIAKALNTMRLFILIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGACTGG------------------------CTCTTTACAACGCCCTTAATGCTTATCAAGTTCCCACTCTTACTGAGGCTT---------GGT------GATAAAGGTAAA---AAGTTC------------------------------------TTTGTGCAG---CTTGTAACCCTTGATATAGGCATGATTGTCTGCGCCTTCATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCT---------TCA---------------------------ACGGAATGG------------------TGGGGCTTC---TTTTTGGTTGCATGCGTCCTCGAACTTTTAATTGTTGCGACGCTC---------------TAC------ACT---GGCCTTGGGTCCGCCATCAACTCAGCC---------------CCAGCGCCTATC---GCT---AAA---GCA---CTC---AAT---ACAATG---AGACTGTTCATTTTGATA---------------------------------------------------------------GGATGG---------GCTATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------TEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAINSA-----PAPI-A-K-A-L-N-TM-RLFILI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ926192 [I-Firmicutes-Exiguobacterium] RHOMEO_AG_OTU15_u6 gb|KJ926192| Uncultured bacterium cloneRHOMEO AG OTU15 u6 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU15 u6 putative proteorhodopsin gene, partial cds KJ926192 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGCTCTTTACAACGCCCTTAATGCTTATCAAGTTCCCACTCTTACTGAGGCTTGGTGATAAAGGTAAAAAGTTCTTTGTGCAGCTTGTAACCCTTGATATAGGCATGATTGTCTGCGCCTTCATTGCAGAGACTTCACCAGTTGCTTCAACGGAATGGTGGGGCTTCTTTTTGGTTGCATGCGTCCTCGAACTTTTAATTGTTGCGACGCTCTACACTGGCCTTGGGTCCGCCATCAACTCAGCCCCAGCGCCTATCGCTAAAGCACTCAATACAATGAGACTGTTCATTTTGATA WLFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASTEWWGFFLVACVLELLIVATLYTGLGSAINSAPAPIAKALNTMRLFILI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTCTTTACAACGCCCTTAATGCTTATCAAGTTCCCACTCTTACTGAGGCTT---------GGT------GATAAAGGTAAA---AAGTTC------------------------------------TTTGTGCAG---CTTGTAACCCTTGATATAGGCATGATTGTCTGCGCCTTCATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCT---------TCA---------------------------ACGGAATGG------------------TGGGGCTTC---TTTTTGGTTGCATGCGTCCTCGAACTTTTAATTGTTGCGACGCTC---------------TAC------ACT---GGCCTTGGGTCCGCCATCAACTCAGCC---------------CCAGCGCCTATC---GCT---AAA---GCA---CTC---AAT---ACAATG---AGACTGTTCATTTTGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------TEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAINSA-----PAPI-A-K-A-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ926195 [I-Firmicutes-Exiguobacterium] RHOMEO_AG_OTU15_u9 gb|KJ926195| Uncultured bacterium cloneRHOMEO AG OTU15 u9 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU15 u9 putative proteorhodopsin gene, partial cds KJ926195 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGCTCTTTACAACGCCCTTAATGCTTATCAAGTTCCCACTCTTACTGAGGCTTGGTGATAAAGGTAAAAAGTTCTTTGTGCAGCTTGTAACCCTTGATATAGGCATGATTGTCTGCGCCTTCATTGCAGAGACTTCACCAGTTGCTTCAACGGAATGGTGGGGCTTCTTTTTGGTTGCATGCGTCCTCGAACTTTTAATTGTTGCGACGCTCTACACTGGCCTTGGGTCCGCCATCAACTCAGCCCCAGCGCCTATCGCTAAAGCACTCAATACAATGAGACTGTTCATTTTGATA WLFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASTEWWGFFLVACVLELLIVATLYTGLGSAINSAPAPIAKALNTMRLFILI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTCTTTACAACGCCCTTAATGCTTATCAAGTTCCCACTCTTACTGAGGCTT---------GGT------GATAAAGGTAAA---AAGTTC------------------------------------TTTGTGCAG---CTTGTAACCCTTGATATAGGCATGATTGTCTGCGCCTTCATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCT---------TCA---------------------------ACGGAATGG------------------TGGGGCTTC---TTTTTGGTTGCATGCGTCCTCGAACTTTTAATTGTTGCGACGCTC---------------TAC------ACT---GGCCTTGGGTCCGCCATCAACTCAGCC---------------CCAGCGCCTATC---GCT---AAA---GCA---CTC---AAT---ACAATG---AGACTGTTCATTTTGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------TEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAINSA-----PAPI-A-K-A-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ926186 [I-Firmicutes-Exiguobacterium] RHOMEO_AG_OTU15_u18 gb|KJ926186| Uncultured bacterium cloneRHOMEO AG OTU15 u18 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU15 u18 putative proteorhodopsin gene, partial cds KJ926186 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGCTCTTTACAACGCCCTTAATGCTTATCAAGTCCCCACTCTTACTGAGGCTTGGTGATAAAGGTAAAAAGTTCTTTGTGCAGCTTGTAACCCTTGATATAGGCATGATTGTCTGCGCCTTCATTGCAGAGACTTCACCAGTTGCTTCAACGGAATGGTGGGGCTTCTTTTTGGTTGCATGCGTCCTCGAACTTTTAATTGTTGCGACGCTCTACACTGGCCTTGGGTCCGCCATCAACTCAGCCCCAGCGCCTATCGCTAAAGCACTCAATACAATGAGACTGTTCATTTTGATA WLFTTPLMLIKSPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASTEWWGFFLVACVLELLIVATLYTGLGSAINSAPAPIAKALNTMRLFILI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTCTTTACAACGCCCTTAATGCTTATCAAGTCCCCACTCTTACTGAGGCTT---------GGT------GATAAAGGTAAA---AAGTTC------------------------------------TTTGTGCAG---CTTGTAACCCTTGATATAGGCATGATTGTCTGCGCCTTCATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCT---------TCA---------------------------ACGGAATGG------------------TGGGGCTTC---TTTTTGGTTGCATGCGTCCTCGAACTTTTAATTGTTGCGACGCTC---------------TAC------ACT---GGCCTTGGGTCCGCCATCAACTCAGCC---------------CCAGCGCCTATC---GCT---AAA---GCA---CTC---AAT---ACAATG---AGACTGTTCATTTTGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LFTTPLMLIKSPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------TEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAINSA-----PAPI-A-K-A-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ926190 [I-Firmicutes-Exiguobacterium] RHOMEO_AG_OTU15_u4 gb|KJ926190| Uncultured bacterium cloneRHOMEO AG OTU15 u4 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU15 u4 putative proteorhodopsin gene, partial cds KJ926190 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGCTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCACTCTTACTGAGGCTTGGTGATAAAGGTAAAAAGTTCTTTGTGCAGCTTGTAACCCTTGATATAGGCATGATTGTCTGCGCCTTCATTGCAGAGACTTCACCAGTTGCTTCAACGGAATGGTGGGGCTCCTCTTTGGTTGCATGCGTCCTCGAACTTTTAATTGTTGCGACGCTCTACACTGGCCTTGGGTCCGCCATCAACTCAGCCCCAGCGCCTATCGCTAAAGCACTCAATACAATGAGACTGTTCATTTTGATA WLFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASTEWWGSSLVACVLELLIVATLYTGLGSAINSAPAPIAKALNTMRLFILI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCACTCTTACTGAGGCTT---------GGT------GATAAAGGTAAA---AAGTTC------------------------------------TTTGTGCAG---CTTGTAACCCTTGATATAGGCATGATTGTCTGCGCCTTCATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCT---------TCA---------------------------ACGGAATGG------------------TGGGGCTCC---TCTTTGGTTGCATGCGTCCTCGAACTTTTAATTGTTGCGACGCTC---------------TAC------ACT---GGCCTTGGGTCCGCCATCAACTCAGCC---------------CCAGCGCCTATC---GCT---AAA---GCA---CTC---AAT---ACAATG---AGACTGTTCATTTTGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------TEW------WGS-SLVACVLELLIVATL-----Y--T-GLGSAINSA-----PAPI-A-K-A-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ926177 [I-Firmicutes-Exiguobacterium] RHOMEO_AG_OTU15 gb|KJ926177| Uncultured bacterium cloneRHOMEO AG OTU15 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU15 putative proteorhodopsin gene, partial cds KJ926177 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGCTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCACTCTTACTGAGGCTTGGTGATAAAGGTAAAAAGTTCTTTGTGCAGCTTGTAACCCTTGATATAGGCATGATTGTCTGCGCCTTCATTGCAGAGACTTCACCAGTTGCTTCAACGGAATGGTGGGGCTTCTTTTTGGTTGCATGCGTCCTCGAACTTTTAATTGTTGCGACGCTCTACACTGGCCTTGGGTCCGCCATCAACTCAGCCCCAGCGCCTATCGCTAAAGCACTCAATACAATGAGACTGTTCATTTTGATA WLFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASTEWWGFFLVACVLELLIVATLYTGLGSAINSAPAPIAKALNTMRLFILI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCACTCTTACTGAGGCTT---------GGT------GATAAAGGTAAA---AAGTTC------------------------------------TTTGTGCAG---CTTGTAACCCTTGATATAGGCATGATTGTCTGCGCCTTCATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCT---------TCA---------------------------ACGGAATGG------------------TGGGGCTTC---TTTTTGGTTGCATGCGTCCTCGAACTTTTAATTGTTGCGACGCTC---------------TAC------ACT---GGCCTTGGGTCCGCCATCAACTCAGCC---------------CCAGCGCCTATC---GCT---AAA---GCA---CTC---AAT---ACAATG---AGACTGTTCATTTTGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------TEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAINSA-----PAPI-A-K-A-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_DQ203830 [I-Firmicutes-Exiguobacterium] SS114a40E9_env_samples_DQ203830 gi|77548108|gb|DQ203830| Uncultured bacterium clone SS114a40E9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40E9 predicted proteorhodopsin gene, partial cds DQ203830 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump D97 ; K108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTACATTGATTGGCTCTTTACAACGCCCTTGATGCTTATAAAGTTCCCACTCTTGCTGCGGCTTGGTGACAAGGGTAAAAAGTTTTTCGTACAGCTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAGACTTCACCAGTTGCCTCAAACGAATGGTGGGGATTTTTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTTGCGACTCTCTACACTGGCCTTGGGTCTGCCATTAGCTCGGCCCCAGCGCCTATTGCAAAAGCACTCAATACTATGAGACTTTTCATTTTGATAGGGTGGGCAATCTATCCA RYIDWLFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAISSAPAPIAKALNTMRLFILIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATTGATTGG------------------------CTCTTTACAACGCCCTTGATGCTTATAAAGTTCCCACTCTTGCTGCGGCTT---------GGT------GACAAGGGTAAA---AAGTTT------------------------------------TTCGTACAG---CTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------AACGAATGG------------------TGGGGATTT---TTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTTGCGACTCTC---------------TAC------ACT---GGCCTTGGGTCTGCCATTAGCTCGGCC---------------CCAGCGCCTATT---GCA---AAA---GCA---CTC---AAT---ACTATG---AGACTTTTCATTTTGATA---------------------------------------------------------------GGGTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAISSA-----PAPI-A-K-A-L-N-TM-RLFILI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_DQ203311 [I-Firmicutes-Exiguobacterium] SS114a80C12_env_samples_DQ203311 gi|77547070|gb|DQ203311| Uncultured bacterium clone SS114a80C12 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a80C12 predicted proteorhodopsin gene, partial cds DQ203311 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump D97 ; K108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_80m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_2003 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGATTGGCTCTTTACAACGCCCTTGATGCTTATAAAGTTCCCACTCTTGCTGCGGCTTGGTGACAAGGGTAAAAAGTTTTTCGTACAGCTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAGACTTCACCAGTTGCCTCAAACGAATGGTGGGGATTTTTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTTGCGACTCTCTACACTGGCCTTGGGTCTGCCATTAGCTCGGCCCCAGCGCCTATTGCAAAAGCACTCAATACTATGAGACTTTTCATTTTGATAGGGTGGGCCATATATCCA SYIDWLFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAISSAPAPIAKALNTMRLFILIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGATTGG------------------------CTCTTTACAACGCCCTTGATGCTTATAAAGTTCCCACTCTTGCTGCGGCTT---------GGT------GACAAGGGTAAA---AAGTTT------------------------------------TTCGTACAG---CTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------AACGAATGG------------------TGGGGATTT---TTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTTGCGACTCTC---------------TAC------ACT---GGCCTTGGGTCTGCCATTAGCTCGGCC---------------CCAGCGCCTATT---GCA---AAA---GCA---CTC---AAT---ACTATG---AGACTTTTCATTTTGATA---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAISSA-----PAPI-A-K-A-L-N-TM-RLFILI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_DQ203301 [I-Firmicutes-Exiguobacterium] SS114a80A2_env_samples_DQ203301 gi|77547050|gb|DQ203301| Uncultured bacterium clone SS114a80A2 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a80A2 predicted proteorhodopsin gene, partial cds DQ203301 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump D97 ; K108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_80m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_2003 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTCTTTACAACGCCCTTGATGCTTATAAAGTTCCCACTCTTGCTGCGGCTTGGTGACAAGGGTAAAAAGTTTTTCGTACAGCTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAGACTTCACCAGTTGCCTCAAACGAATGGTGGGGATTTTTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTTGCGACTCTCTACACTGGCCTTGGGTCTGCCATTAGCTCGGCCCCAGCGCCTATTGCAAAAGCACTCAATACTATGAGACTTTTCATTTTGATAGGGTGGGCAATATATCCA RYIDWLFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAISSAPAPIAKALNTMRLFILIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTCTTTACAACGCCCTTGATGCTTATAAAGTTCCCACTCTTGCTGCGGCTT---------GGT------GACAAGGGTAAA---AAGTTT------------------------------------TTCGTACAG---CTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------AACGAATGG------------------TGGGGATTT---TTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTTGCGACTCTC---------------TAC------ACT---GGCCTTGGGTCTGCCATTAGCTCGGCC---------------CCAGCGCCTATT---GCA---AAA---GCA---CTC---AAT---ACTATG---AGACTTTTCATTTTGATA---------------------------------------------------------------GGGTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAISSA-----PAPI-A-K-A-L-N-TM-RLFILI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_DQ203782 [I-Firmicutes-Exiguobacterium] SS114a0G10_env_samples_DQ203782 gi|77548012|gb|DQ203782| Uncultured bacterium clone SS114a0G10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0G10 predicted proteorhodopsin gene, partial cds DQ203782 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump D97 ; K108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGACTGGCTCTTTACAACGCCCTTGATGCTTATAAAGTTCCCACTCTTGCTGCGGCTTGGTGACAAGGGTAAAAAGTTTTTCGTACAGCTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAGACTTCACCAGTTGCCTCAAACGAATGGTGGGGATTTTTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTTGCGACTCTCTACACTGGCCTTGGGTCTGCCATTAGCTCGGCCCCAGCGCCTATTGCAAAAGCACTCAATACTATGAGACTTTTCATTTTGATAGGGTGGGCAATATACCCA SYIDWLFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAISSAPAPIAKALNTMRLFILIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGACTGG------------------------CTCTTTACAACGCCCTTGATGCTTATAAAGTTCCCACTCTTGCTGCGGCTT---------GGT------GACAAGGGTAAA---AAGTTT------------------------------------TTCGTACAG---CTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------AACGAATGG------------------TGGGGATTT---TTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTTGCGACTCTC---------------TAC------ACT---GGCCTTGGGTCTGCCATTAGCTCGGCC---------------CCAGCGCCTATT---GCA---AAA---GCA---CTC---AAT---ACTATG---AGACTTTTCATTTTGATA---------------------------------------------------------------GGGTGG---------GCAATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAISSA-----PAPI-A-K-A-L-N-TM-RLFILI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_DQ203319 [I-Firmicutes-Exiguobacterium] SS114a80D6_env_samples_DQ203319 gi|77547086|gb|DQ203319| Uncultured bacterium clone SS114a80D6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a80D6 predicted proteorhodopsin gene, partial cds DQ203319 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump D97 ; K108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_80m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_2003 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATCGACTGGCTCTTTACAACGCCCTTGATGCTTATAAAGTTCCCACTCTTGCTGCGGCTTGGTGACAAGGGTAAAAAGTTTTTCGTACAGCTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAGACTTCACCAGTTGCCTCAAACGAATGGTGGGGATTTTTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTTGCGACTCTCTACACTGGCCTTGGGTCTGCCATTAGCTCGGCCCCAGCGCCTATTGCAAAAGCACTCAATACTATGAGACTTTTCATTTTGATAGGGTGGGCAATATATCCA RYIDWLFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAISSAPAPIAKALNTMRLFILIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATCGACTGG------------------------CTCTTTACAACGCCCTTGATGCTTATAAAGTTCCCACTCTTGCTGCGGCTT---------GGT------GACAAGGGTAAA---AAGTTT------------------------------------TTCGTACAG---CTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------AACGAATGG------------------TGGGGATTT---TTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTTGCGACTCTC---------------TAC------ACT---GGCCTTGGGTCTGCCATTAGCTCGGCC---------------CCAGCGCCTATT---GCA---AAA---GCA---CTC---AAT---ACTATG---AGACTTTTCATTTTGATA---------------------------------------------------------------GGGTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAISSA-----PAPI-A-K-A-L-N-TM-RLFILI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_DQ339288 [I-Firmicutes-Exiguobacterium] clone_S-S80M-D8_DQ339288 gi|85681551|gb|DQ339288| Uncultured bacterium clone S-S80M-D8 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-D8 predicted proteorhodopsin gene, partial cds. DQ339288 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump D97 ; K108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTCTTTACAACGCCCTTGATGCTTATAAAGTTCCCACTCTTGCTGCGGCTTGGTGACAAGGGTAAAAAGTTTTTCGTACAGCTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAGACTTCACCAGTTGCCTCAAACGAATGGTGGGGATTTTTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTTGCGACTCTCTACACTGGCCTTGGGTCTGCCATTAGCTCGGCCCCAGCGCCTATTGCAAAAGCACTCAATACTATGAGACTTTTCATTTTGATAGGGTGGGCAATTTATCCA RYIDWLFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAISSAPAPIAKALNTMRLFILIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTCTTTACAACGCCCTTGATGCTTATAAAGTTCCCACTCTTGCTGCGGCTT---------GGT------GACAAGGGTAAA---AAGTTT------------------------------------TTCGTACAG---CTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------AACGAATGG------------------TGGGGATTT---TTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTTGCGACTCTC---------------TAC------ACT---GGCCTTGGGTCTGCCATTAGCTCGGCC---------------CCAGCGCCTATT---GCA---AAA---GCA---CTC---AAT---ACTATG---AGACTTTTCATTTTGATA---------------------------------------------------------------GGGTGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAISSA-----PAPI-A-K-A-L-N-TM-RLFILI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_EU079215 [I-Firmicutes-Exiguobacterium] NASB_78_env_samples_EU079215 gi|156106590|gb|EU079215| Uncultured organism clone NASB 78 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 78 putative proteorhodopsin gene, partial cds EU079215 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump D97 ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGTTACATAGACTGGCTCTTTACAACGCCCTTGATGCTTATAAAGTTCCCACTCTTGCTGCGGCTTGGTGACAAGGGTAAAAAGTTTTTCGTACAGCTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAGACTTCACCAGTTGCCTCAAACGAATGGTGGGGATTTTTTCTGGTCGCGTGTGTCCTCGAACTTTTAATTGTTGCGACTCTCTACACTGGCCTTGGGTCTGCCATTAGCTCGGCCCCAGCGCCTATTGCAAAAGCACTCAATACTATGAGACTTTTCATTTTGATAGGCTGGGCCATTTAC RYIDWLFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAISSAPAPIAKALNTMRLFILIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTACATAGACTGG------------------------CTCTTTACAACGCCCTTGATGCTTATAAAGTTCCCACTCTTGCTGCGGCTT---------GGT------GACAAGGGTAAA---AAGTTT------------------------------------TTCGTACAG---CTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------AACGAATGG------------------TGGGGATTT---TTTCTGGTCGCGTGTGTCCTCGAACTTTTAATTGTTGCGACTCTC---------------TAC------ACT---GGCCTTGGGTCTGCCATTAGCTCGGCC---------------CCAGCGCCTATT---GCA---AAA---GCA---CTC---AAT---ACTATG---AGACTTTTCATTTTGATA---------------------------------------------------------------GGCTGG---------GCCATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAISSA-----PAPI-A-K-A-L-N-TM-RLFILI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ926178 [I-Firmicutes-Exiguobacterium] RHOMEO_AG_OTU15_u10 gb|KJ926178| Uncultured bacterium cloneRHOMEO AG OTU15 u10 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU15 u10 putative proteorhodopsin gene, partial cds KJ926178 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGCTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTTGGTGACAAAGGTAAAAAGTTTTTCGTACAGCTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAGACTTCACCAGTTGCCTCAAACGAGTGGTGGGGATTTTTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTAGCAACTCTCTACACAGGTCTTGGCTCTGCCATAAAAGCAGCTCCAGCTCCTATTGCCAAGGCTCTTGATACGATGCGGTTGTTCATTCTTATA WLFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAIKAAPAPIAKALDTMRLFILI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTT---------GGT------GACAAAGGTAAA---AAGTTT------------------------------------TTCGTACAG---CTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------AACGAGTGG------------------TGGGGATTT---TTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTAGCAACTCTC---------------TAC------ACA---GGTCTTGGCTCTGCCATAAAAGCAGCT---------------CCAGCTCCTATT---GCC---AAG---GCT---CTT---GAT---ACGATG---CGGTTGTTCATTCTTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAIKAA-----PAPI-A-K-A-L-D-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ926182 [I-Firmicutes-Exiguobacterium] RHOMEO_AG_OTU15_u14 gb|KJ926182| Uncultured bacterium cloneRHOMEO AG OTU15 u14 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU15 u14 putative proteorhodopsin gene, partial cds KJ926182 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGCTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTTGGTGACAAAGGTAAAAAGTTTTTCGTACAGCTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAGACTTCACCAGTTGCCTCAAACGAGTGGTGGGGATTTTTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTAGCAACTCTCTACACAGGTCTTGGCTCTGCCATAAAAGCAGCTCCAGCTCCTATTGCCAAGGCTCTTGATACGATGCGGTTGTTCATTCTTATA WLFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAIKAAPAPIAKALDTMRLFILI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTT---------GGT------GACAAAGGTAAA---AAGTTT------------------------------------TTCGTACAG---CTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------AACGAGTGG------------------TGGGGATTT---TTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTAGCAACTCTC---------------TAC------ACA---GGTCTTGGCTCTGCCATAAAAGCAGCT---------------CCAGCTCCTATT---GCC---AAG---GCT---CTT---GAT---ACGATG---CGGTTGTTCATTCTTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAIKAA-----PAPI-A-K-A-L-D-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ926179 [I-Firmicutes-Exiguobacterium] RHOMEO_AG_OTU15_u11 gb|KJ926179| Uncultured bacterium cloneRHOMEO AG OTU15 u11 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU15 u11 putative proteorhodopsin gene, partial cds KJ926179 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGCTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTTGGTGACAAAGGTAAAAAGTTTTTCGTACAGCTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAGACTTCACCAGTTGCCTCAAACGAGTGGTGGGGATTTTTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTAGCAACTCTCTACACAGGTCTTGGCTCTGCCATAAAAGCAGCTCCAGCTCCTATTGCCAAGGCTCTTGATACGATGCGGTTGTTCATTCTTATA WLFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAIKAAPAPIAKALDTMRLFILI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTT---------GGT------GACAAAGGTAAA---AAGTTT------------------------------------TTCGTACAG---CTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------AACGAGTGG------------------TGGGGATTT---TTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTAGCAACTCTC---------------TAC------ACA---GGTCTTGGCTCTGCCATAAAAGCAGCT---------------CCAGCTCCTATT---GCC---AAG---GCT---CTT---GAT---ACGATG---CGGTTGTTCATTCTTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAIKAA-----PAPI-A-K-A-L-D-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ926187 [I-Firmicutes-Exiguobacterium] RHOMEO_AG_OTU15_u19 gb|KJ926187| Uncultured bacterium cloneRHOMEO AG OTU15 u19 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU15 u19 putative proteorhodopsin gene, partial cds KJ926187 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGCTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTTGGTGACAAAGGTAAAAAGTTTTTCGTACAGCTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAGACTTCACCAGTTGCCTCAAACGAGTGGTGGGGATTTTTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTAGCAGCTCTCTACACAGGTCTTGGCTCTGCCATAAAAGCAGCTCCAGCTCCTATTGCCAAGGCTCTTGATACGATGCGGTTGTTCATTCTTATA WLFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVAALYTGLGSAIKAAPAPIAKALDTMRLFILI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTT---------GGT------GACAAAGGTAAA---AAGTTT------------------------------------TTCGTACAG---CTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------AACGAGTGG------------------TGGGGATTT---TTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTAGCAGCTCTC---------------TAC------ACA---GGTCTTGGCTCTGCCATAAAAGCAGCT---------------CCAGCTCCTATT---GCC---AAG---GCT---CTT---GAT---ACGATG---CGGTTGTTCATTCTTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVAAL-----Y--T-GLGSAIKAA-----PAPI-A-K-A-L-D-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ926185 [I-Firmicutes-Exiguobacterium] RHOMEO_AG_OTU15_u17 gb|KJ926185| Uncultured bacterium cloneRHOMEO AG OTU15 u17 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU15 u17 putative proteorhodopsin gene, partial cds KJ926185 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGCTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTTGGTGACAAAGGTAAAAAGTTTTTCGTACAGCTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAGACTTCACCAGTTGCCTCAAACGAGTGGTGGGGATTTTTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTAGCAACTCTCTACACAGGTCTTGGCTCTGCCATAAAAGCAGCTCCAGCTCCTATTGCCAAGGCTCTTGATACGATGCGGTTGTTCATTCTTATA WLFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAIKAAPAPIAKALDTMRLFILI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTT---------GGT------GACAAAGGTAAA---AAGTTT------------------------------------TTCGTACAG---CTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------AACGAGTGG------------------TGGGGATTT---TTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTAGCAACTCTC---------------TAC------ACA---GGTCTTGGCTCTGCCATAAAAGCAGCT---------------CCAGCTCCTATT---GCC---AAG---GCT---CTT---GAT---ACGATG---CGGTTGTTCATTCTTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAIKAA-----PAPI-A-K-A-L-D-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ926194 [I-Firmicutes-Exiguobacterium] RHOMEO_AG_OTU15_u8 gb|KJ926194| Uncultured bacterium cloneRHOMEO AG OTU15 u8 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU15 u8 putative proteorhodopsin gene, partial cds KJ926194 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGCTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTTGGTGACAAAGGTAAAAAGTTTTTCGTACAGCTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAGACTTCACCAGTTGCCTCAAACGAGTGGTGGGGATTTTTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTAGCAACTCTCTACACAGGTCTTGGCTCTGCCATAAAAGCAGCTCCAGCTCCTATTGCCAAGGCTCTTGATACGATGCGGTTGTTCATTCTTATA WLFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAIKAAPAPIAKALDTMRLFILI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTT---------GGT------GACAAAGGTAAA---AAGTTT------------------------------------TTCGTACAG---CTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------AACGAGTGG------------------TGGGGATTT---TTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTAGCAACTCTC---------------TAC------ACA---GGTCTTGGCTCTGCCATAAAAGCAGCT---------------CCAGCTCCTATT---GCC---AAG---GCT---CTT---GAT---ACGATG---CGGTTGTTCATTCTTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAIKAA-----PAPI-A-K-A-L-D-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ926184 [I-Firmicutes-Exiguobacterium] RHOMEO_AG_OTU15_u16 gb|KJ926184| Uncultured bacterium cloneRHOMEO AG OTU15 u16 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU15 u16 putative proteorhodopsin gene, partial cds KJ926184 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGCTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTTGGTGACAAAGGTAAAAAGTTTTTCGTACAGCTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAGACTTCACCAGTTGCCTCAAACGAGTGGTGGGGATTTTTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTAGCAACTCTCTACACAGGTCTTGGCTCTGCCATAAAAGCAGCTCCAGCTCCTATTGCCAAGGCTCTTGATACGATGCGGTTGTTCATTCTTATA WLFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAIKAAPAPIAKALDTMRLFILI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTT---------GGT------GACAAAGGTAAA---AAGTTT------------------------------------TTCGTACAG---CTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------AACGAGTGG------------------TGGGGATTT---TTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTAGCAACTCTC---------------TAC------ACA---GGTCTTGGCTCTGCCATAAAAGCAGCT---------------CCAGCTCCTATT---GCC---AAG---GCT---CTT---GAT---ACGATG---CGGTTGTTCATTCTTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAIKAA-----PAPI-A-K-A-L-D-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ926193 [I-Firmicutes-Exiguobacterium] RHOMEO_AG_OTU15_u7 gb|KJ926193| Uncultured bacterium cloneRHOMEO AG OTU15 u7 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU15 u7 putative proteorhodopsin gene, partial cds KJ926193 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGCTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTTGGTGACAAAGGTAAGAAGTTTTTCGTACAGCTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAGACTTCACCAGTTGCCTCAAACGAGTGGTGGGGATTTTTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTAGCAACTCTCTACACAGGTCTTGGCTCTGCCATAAAAGCAGCTCCAGCTCCTATTGCCAAGGCTCTTGATACGATGCGGTTGTTCATTCTTATA WLFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAIKAAPAPIAKALDTMRLFILI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTT---------GGT------GACAAAGGTAAG---AAGTTT------------------------------------TTCGTACAG---CTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------AACGAGTGG------------------TGGGGATTT---TTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTAGCAACTCTC---------------TAC------ACA---GGTCTTGGCTCTGCCATAAAAGCAGCT---------------CCAGCTCCTATT---GCC---AAG---GCT---CTT---GAT---ACGATG---CGGTTGTTCATTCTTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAIKAA-----PAPI-A-K-A-L-D-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ926181 [I-Firmicutes-Exiguobacterium] RHOMEO_AG_OTU15_u13 gb|KJ926181| Uncultured bacterium cloneRHOMEO AG OTU15 u13 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU15 u13 putative proteorhodopsin gene, partial cds KJ926181 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGCTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTTGGTGACAAAGGTAAAAAGTTTTTCGTACAGCTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAGACTTCACCAGTTGCCTCAAACGAGTGGTGGGGATTTTTCATGGTCGCGTGCGTCCTCGAACTTTTAATTGTAGCAACTCTCTACACAGGTCTTGGCTCTGCCATAAAAGCAGCTCCAGCTCCTATTGCCAAGGCTCTTGATACGATGCGGTTGTTCATTCTTATA WLFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFMVACVLELLIVATLYTGLGSAIKAAPAPIAKALDTMRLFILI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTT---------GGT------GACAAAGGTAAA---AAGTTT------------------------------------TTCGTACAG---CTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------AACGAGTGG------------------TGGGGATTT---TTCATGGTCGCGTGCGTCCTCGAACTTTTAATTGTAGCAACTCTC---------------TAC------ACA---GGTCTTGGCTCTGCCATAAAAGCAGCT---------------CCAGCTCCTATT---GCC---AAG---GCT---CTT---GAT---ACGATG---CGGTTGTTCATTCTTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FMVACVLELLIVATL-----Y--T-GLGSAIKAA-----PAPI-A-K-A-L-D-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ926180 [I-Firmicutes-Exiguobacterium] RHOMEO_AG_OTU15_u12 gb|KJ926180| Uncultured bacterium cloneRHOMEO AG OTU15 u12 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU15 u12 putative proteorhodopsin gene, partial cds KJ926180 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGCTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTTGGTGACAAAGGTAAAAAGTTTTTCGTACAGCTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAGACTTCACCAGTTGCCTCAAACGAGTGGTGGGGATTCTTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTAGCAACTCTCTACACAGGTCTTGGCTCTGCCATAAAAGCAGCTCCAGCTCCTATTGCCAAGGCTCTTGATACGATGCGGTTGTTCATTCTTATA WLFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAIKAAPAPIAKALDTMRLFILI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTT---------GGT------GACAAAGGTAAA---AAGTTT------------------------------------TTCGTACAG---CTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------AACGAGTGG------------------TGGGGATTC---TTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTAGCAACTCTC---------------TAC------ACA---GGTCTTGGCTCTGCCATAAAAGCAGCT---------------CCAGCTCCTATT---GCC---AAG---GCT---CTT---GAT---ACGATG---CGGTTGTTCATTCTTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAIKAA-----PAPI-A-K-A-L-D-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ926183 [I-Firmicutes-Exiguobacterium] RHOMEO_AG_OTU15_u15 gb|KJ926183| Uncultured bacterium cloneRHOMEO AG OTU15 u15 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU15 u15 putative proteorhodopsin gene, partial cds KJ926183 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGCTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTTGGTGACAAAGGTAAAAAGTTTTTCGTACAGCTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAGACTTCACCAGTTGCCCCAAACGAGTGGTGGGGATTTTTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTAGCAACTCTCTACACAGGTCTTGGCTCTGCCATAGAAGCAGCTCCAGCTCCTATTGCCAAGGCTCTTGATACGATGCGGTTGTTCATTCTTATA WLFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVAPNEWWGFFLVACVLELLIVATLYTGLGSAIEAAPAPIAKALDTMRLFILI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTT---------GGT------GACAAAGGTAAA---AAGTTT------------------------------------TTCGTACAG---CTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------CCA---------------------------AACGAGTGG------------------TGGGGATTT---TTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTAGCAACTCTC---------------TAC------ACA---GGTCTTGGCTCTGCCATAGAAGCAGCT---------------CCAGCTCCTATT---GCC---AAG---GCT---CTT---GAT---ACGATG---CGGTTGTTCATTCTTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---P---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAIEAA-----PAPI-A-K-A-L-D-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ926189 [I-Firmicutes-Exiguobacterium] RHOMEO_AG_OTU15_u3 gb|KJ926189| Uncultured bacterium cloneRHOMEO AG OTU15 u3 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU15 u3 putative proteorhodopsin gene, partial cds KJ926189 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGCTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTTGGTGACAAAGGTAAAAAGTTTTTCGTACAGCTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAGACTTCACCAGTTGCCTCAAACGAGTGGTGGGGATTTTTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTAGCAACTCTCTACACAGGTCTTGGCTCTGCCATAAAAGCAGCTCCAGCTCCTATTGCCAAGGCTCTTGATACGATGCGGTTGTTCATTCTTATA WLFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAIKAAPAPIAKALDTMRLFILI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTT---------GGT------GACAAAGGTAAA---AAGTTT------------------------------------TTCGTACAG---CTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------AACGAGTGG------------------TGGGGATTT---TTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTAGCAACTCTC---------------TAC------ACA---GGTCTTGGCTCTGCCATAAAAGCAGCT---------------CCAGCTCCTATT---GCC---AAG---GCT---CTT---GAT---ACGATG---CGGTTGTTCATTCTTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAIKAA-----PAPI-A-K-A-L-D-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ926188 [I-Firmicutes-Exiguobacterium] RHOMEO_AG_OTU15_u2 gb|KJ926188| Uncultured bacterium cloneRHOMEO AG OTU15 u2 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU15 u2 putative proteorhodopsin gene, partial cds KJ926188 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGCTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTTGGTGACAAAGGTAAAAAGTTTTTCGTACAGCTTGTAACGCTTGACATAGGCATGGTTGTTTGTGCGTTTATTGCAGAGACTTCACCAGTTGCCTCAAACGAGTGGTGGGGATTTTTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTAGCAACTCTCTACACAGGTCTTGGCTCTGCCATAAAAGCAGCTCCAGCTCCTATTGCCAAGGCTCTTGATACGATGCGGTTGTTCATTCTTATA WLFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMVVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAIKAAPAPIAKALDTMRLFILI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTT---------GGT------GACAAAGGTAAA---AAGTTT------------------------------------TTCGTACAG---CTTGTAACGCTTGACATAGGCATGGTTGTTTGTGCGTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------AACGAGTGG------------------TGGGGATTT---TTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTAGCAACTCTC---------------TAC------ACA---GGTCTTGGCTCTGCCATAAAAGCAGCT---------------CCAGCTCCTATT---GCC---AAG---GCT---CTT---GAT---ACGATG---CGGTTGTTCATTCTTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMVVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAIKAA-----PAPI-A-K-A-L-D-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_DQ422238 [I-Firmicutes-Exiguobacterium] clone_med-0m-h5_DQ422238 gi|90023996|gb|DQ422238| Uncultured bacterium clone med-0m-h5 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-h5 putative proteorhodopsin gene, partial cds. DQ422238 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump D97 ; K108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTTTTTACAACACCCTTGATGCTGATCAAGTTCCCACTATTACTGCGCCTTGGTGACAAGGGTAAAAAATTCTTTGTACAACTTGTAACACTTGATATAGGCATGATTGTTTGTGCCTTCATTGCGGAGACTTCACCAGTTGCCTCAACATCATGGTGGGGATTCTTTTTGGTTGCATGCGTCCTTGAACTTCTAATTGTTGCAACGCTATACACCGGGCTTGGTTCTGCGATAGGAGAAGCGCCTGCCCCACTAGCTAAAGCACTCAACACTATGAGGTTATTCATACTGATCGGTTGGGCTATTTACCCA RYIDWLFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASTSWWGFFLVACVLELLIVATLYTGLGSAIGEAPAPLAKALNTMRLFILIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTTTTTACAACACCCTTGATGCTGATCAAGTTCCCACTATTACTGCGCCTT---------GGT------GACAAGGGTAAA---AAATTC------------------------------------TTTGTACAA---CTTGTAACACTTGATATAGGCATGATTGTTTGTGCCTTCATTGCGGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------ACATCATGG------------------TGGGGATTC---TTTTTGGTTGCATGCGTCCTTGAACTTCTAATTGTTGCAACGCTA---------------TAC------ACC---GGGCTTGGTTCTGCGATAGGAGAAGCG---------------CCTGCCCCACTA---GCT---AAA---GCA---CTC---AAC---ACTATG---AGGTTATTCATACTGATC---------------------------------------------------------------GGTTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------TSW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAIGEA-----PAPL-A-K-A-L-N-TM-RLFILI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ926191 [I-Firmicutes-Exiguobacterium] RHOMEO_AG_OTU15_u5 gb|KJ926191| Uncultured bacterium cloneRHOMEO AG OTU15 u5 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU15 u5 putative proteorhodopsin gene, partial cds KJ926191 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGCTTTTTACAACACCGTTGATGCTCATCAAGTTTCCGTTACTACTTCGACTTGGAGACAAGGGAACAAAGTTTTTTGTCCAACTCGTCACTCTCGACATTGGCATGATTGTCTGTGCTTTTATTGCAGAGACCTCACCTATAGGCTCAAATGAGTGGTGGGGATTTTTCATTGTAGCCTGTGTTCTAGAATTATTGATTGTGGCAATTCTTTACACTGGTCTTGGCTCTGCTATCAACGCGGCACCTGCACCAATTGCTAAATCACTCAACACGATGCGGCTGTTCATTTTGATT WLFTTPLMLIKFPLLLRLGDKGTKFFVQLVTLDIGMIVCAFIAETSPIGSNEWWGFFIVACVLELLIVAILYTGLGSAINAAPAPIAKSLNTMRLFILI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTTTTTACAACACCGTTGATGCTCATCAAGTTTCCGTTACTACTTCGACTT---------GGA------GACAAGGGAACA---AAGTTT------------------------------------TTTGTCCAA---CTCGTCACTCTCGACATTGGCATGATTGTCTGTGCTTTTATTGCAGAG---------ACC------------------TCA---------------------------------------------------------CCT---ATAGGC---------TCA---------------------------AATGAGTGG------------------TGGGGATTT---TTCATTGTAGCCTGTGTTCTAGAATTATTGATTGTGGCAATTCTT---------------TAC------ACT---GGTCTTGGCTCTGCTATCAACGCGGCA---------------CCTGCACCAATT---GCT---AAA---TCA---CTC---AAC---ACGATG---CGGCTGTTCATTTTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LFTTPLMLIKFPLLLRL---G--DKGT-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-IG---S---------NEW------WGF-FIVACVLELLIVAIL-----Y--T-GLGSAINAA-----PAPI-A-K-S-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_EU563315 [I-Firmicutes-Exiguobacterium] Kin_12m_May07B_env_samples_EU563315 gi|171770640|gb|EU563315| Uncultured microorganism clone Kin 12m May07B putative proteorhodopsin gene, partial cds Uncultured microorganism clone Kin 12m May07B putative proteorhodopsin gene, partial cds EU563315 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump D97 ; K108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 May2007 Lake_Kinneret_at_12m_depth other freshwater 32.08 35.07 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na AGTTATATCGACTGGTTGTTCACAACTCCGCTGCTGCTCATTAAGTTTCCGATGCTGCTCCGCCTGGGGAGCAAGGGGAAGAGTCTCTTCCGAAATCTTGTACTGCTTGACATCGGGATGATTGTCACGGCATTCATCGCCGAAACCTCCCAAGTGGGCAGTGGTTCATGGTGGGGATTCTTCATCGTTGCCTGTACATTCGAGTTGGGCATCGTGGGCCTGCTCTATGGTTCTATGAGCGAGGCAATCAATCGCCAGCCGGCACCGATTGCCAGTGCGATTCGTTTGATGCGTCTGTTCATTCTCGTCGGCTGGGCCGTTTATCCA SYIDWLFTTPLLLIKFPMLLRLGSKGKSLFRNLVLLDIGMIVTAFIAETSQVGSGSWWGFFIVACTFELGIVGLLYGSMSEAINRQPAPIASAIRLMRLFILVGWAVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTTATATCGACTGG------------------------TTGTTCACAACTCCGCTGCTGCTCATTAAGTTTCCGATGCTGCTCCGCCTG---------GGG------AGCAAGGGGAAG---AGTCTC------------------------------------TTCCGAAAT---CTTGTACTGCTTGACATCGGGATGATTGTCACGGCATTCATCGCCGAA---------ACC------------------TCC---------------------------------------------------------CAA---GTGGGC---------AGT---------------------------GGTTCATGG------------------TGGGGATTC---TTCATCGTTGCCTGTACATTCGAGTTGGGCATCGTGGGCCTGCTC---------------TAT------GGT---TCTATGAGCGAGGCAATCAATCGCCAG---------------CCGGCACCGATT---GCC---AGT---GCG---ATT---CGT---TTGATG---CGTCTGTTCATTCTCGTC---------------------------------------------------------------GGCTGG---------GCCGTTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LFTTPLLLIKFPMLLRL---G--SKGK-SL------------FRN-LVLLDIGMIVTAFIAE---T------S-------------------Q-VG---S---------GSW------WGF-FIVACTFELGIVGLL-----Y--G-SMSEAINRQ-----PAPI-A-S-A-I-R-LM-RLFILV---------------------GW---AVYP-------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_EU563314 [I-Firmicutes-Exiguobacterium] Kin_2m_Jan07A_env_samples_EU563314 gi|171770638|gb|EU563314| Uncultured microorganism clone Kin 2m Jan07A putative proteorhodopsin gene, partial cds Uncultured microorganism clone Kin 2m Jan07A putative proteorhodopsin gene, partial cds EU563314 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump D97 ; K108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 01-janv-07 Lake_Kinneret_at_2m_depth other freshwater 32.08 35.07 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na AGTTATATTGATTGGTTGTTCACAACTCCGCTGCTGCTCATTAAGTTTCCGATGCTGCTCCGCCTGGGGAGCAAGGGGAAGAGTCTCTTCCGAAATCTTGTACTGCTTGACATCGGGATGATTGTCACGGCATTCATCGCCGAAACCTCCCAAGTGGGCAGTGGTTCATGGTGGGGATTCTTCATCGTTGCCTGTACATTCGAGTTGGGCATCGTGGGCCTGCTCTATGGTTCTATGAGCGAGGCAATCAATCGCCAGCCGGCACCGATTGCCAGTGCGATTCGTTTGATGCGTCTGTTCATTCTCGTCGGATGGGCAGTTTATCCA SYIDWLFTTPLLLIKFPMLLRLGSKGKSLFRNLVLLDIGMIVTAFIAETSQVGSGSWWGFFIVACTFELGIVGLLYGSMSEAINRQPAPIASAIRLMRLFILVGWAVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTTATATTGATTGG------------------------TTGTTCACAACTCCGCTGCTGCTCATTAAGTTTCCGATGCTGCTCCGCCTG---------GGG------AGCAAGGGGAAG---AGTCTC------------------------------------TTCCGAAAT---CTTGTACTGCTTGACATCGGGATGATTGTCACGGCATTCATCGCCGAA---------ACC------------------TCC---------------------------------------------------------CAA---GTGGGC---------AGT---------------------------GGTTCATGG------------------TGGGGATTC---TTCATCGTTGCCTGTACATTCGAGTTGGGCATCGTGGGCCTGCTC---------------TAT------GGT---TCTATGAGCGAGGCAATCAATCGCCAG---------------CCGGCACCGATT---GCC---AGT---GCG---ATT---CGT---TTGATG---CGTCTGTTCATTCTCGTC---------------------------------------------------------------GGATGG---------GCAGTTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LFTTPLLLIKFPMLLRL---G--SKGK-SL------------FRN-LVLLDIGMIVTAFIAE---T------S-------------------Q-VG---S---------GSW------WGF-FIVACTFELGIVGLL-----Y--G-SMSEAINRQ-----PAPI-A-S-A-I-R-LM-RLFILV---------------------GW---AVYP-------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_FJ545169 [I-Firmicutes-Exiguobacterium] clone_Superior_CD1_PR_F2_rhodopsin_gene_partial_cds_FJ545169 gi|224384013|gb|FJ545169| Uncultured microorganism clone Superior.CD1.PR.F2 putative rhodopsin gene, partial cds. Uncultured microorganism clone Superior.CD1.PR.F2 putative rhodopsin gene, partial cds. FJ545169 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juin-05 Lake Superior other freshwater 47.3 -91.67 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na ATCACGGTTCCATTGCTTGTGATGGAGTTCCCACTTCTGCTTAATTTGGGAAAAGCCGGGCGCGAACTATTCAAGTCACTGCTTTTCTGGTCCTTCGTTATGTTGATCACCGCTTGGGTCGCGGAAGAAAGCGTTACTGGAAGTCAACAATGGTGGACATGGTATGTGGTTTCATGCGGCGCTTGGCTGTACATCGTCTACACGCTGTTCACCAAGGTCTCGGATTCCATGAAGTCTGCCCCTGAAAGTATTCAAGAAAGTTTGAAGACGATGCGTATGTTCGTGCTCGTT ITVPLLVMEFPLLLNLGKAGRELFKSLLFWSFVMLITAWVAEESVTGSQQWWTWYVVSCGAWLYIVYTLFTKVSDSMKSAPESIQESLKTMRMFVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACGGTTCCATTGCTTGTGATGGAGTTCCCACTTCTGCTTAATTTG---------GGA------AAAGCCGGGCGC---GAACTA------------------------------------TTCAAGTCA---CTGCTTTTCTGGTCCTTCGTTATGTTGATCACCGCTTGGGTCGCGGAA---------GAA------------------AGC---------------------------------------------------------GTT---ACTGGA---------AGT---------------------------CAACAATGG------------------TGGACATGG---TATGTGGTTTCATGCGGCGCTTGGCTGTACATCGTCTACACGCTG---------------TTC------ACC---AAGGTCTCGGATTCCATGAAGTCTGCC---------------CCTGAAAGTATT---CAA---GAA---AGT---TTG---AAG---ACGATG---CGTATGTTCGTGCTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITVPLLVMEFPLLLNL---G--KAGR-EL------------FKS-LLFWSFVMLITAWVAE---E------S-------------------V-TG---S---------QQW------WTW-YVVSCGAWLYIVYTL-----F--T-KVSDSMKSA-----PESI-Q-E-S-L-K-TM-RMFVLV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_CP003063 [I-Firmicutes-Exiguobacterium] Exiguobacterium_antarcticum_B7_genome_CP003063 gi|407059973|gb|CP003063| Exiguobacterium antarcticum B7, complete genome Exiguobacterium antarcticum B7, complete genome CP003063 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump D97 ; K108 light-energy conversion (ion transport) Green (L105) [Bacteria/Firmicutes/Bacilli/Bacillales/Bacillales Family XII. Incertae Sedis/Exiguobacterium] taxon:1087448 genomic_DNA strain 31-janv-14 #na biofilm Antarctic Ocean freshwater -77.616421 163.183041 Genome Sequence of Exiguobacterium antarcticum B7, Isolated from a Biofilm in Ginger Lake, King George Island, Antarctica Carneiro,A.R., Ramos,R.T., DallAgnol,H., Pinto,A.C., de Castro Soares,S., Santos,A.R., Guimaraes,L.C., Almeida,S.S., Barauna,R.A., das Gracas,D.A., Franco,L.C., Ali,A., Hassan,S.S., Nunes,C.I., Barbosa,M.S., Fiaux,K.K., Aburjaile,F.F., Barbosa,E.G., Bakhtiar,S.M., Vilela,D., Nobrega,F., Dos Santos,A.L., Carepo,M.S., Azevedo,V., Schneider,M.P., Pellizari,V.H. and Silva,A. J. Bacteriol. 194 (23), 66896690 (2012) 23144424 #na ATGGAAGAAGTCAATTTACTCGTCCTTGCCACGCAGTATATGTTTTGGGTCGGTTTCGTCGGAATGGCCGCTGGGACACTCTACTTTTTAGTCGAACGGAATTCCCTTGCACCGGAATACCGATCCACCGCCACCGTCGCCGCACTCGTCACCTTTGTCGCTGCCATCCATTATTATTTCATGAAGGACGCCGTCGGAACGTCCGGTCTGTTATCGGAAATCGATGGTTTCCCAACAGAAATCCGCTACATCGACTGGCTCGTCACGACGCCGCTGTTGCTCGTCAAGTTTCCCTTGCTGCTTGGTCTGAAAGGTCGGCTTGGCCGTTCGTTGTTAACGAAACTGATCATCGCCGACATCATCATGATCGTCGGGGGCTATATCGGGGAATCGTCGATCAACATCGCCGGCGGTTTCACACAACTCGGATTATGGTCGTATCTGATCGGTTGTCTCGCCTGGATTTATATCATCTATCTGCTGTTTACGAACGTCACGAAAGCTGCTGAAAACAAACCGGCGCCGATTCGTGATGCGCTATTGAAGATGCGGTTGTTCATCCTGATCGGTTGGGCGATTTATCCGATTGGCTATGCCGTCACGTTGTTTGCGCCGGGAGTCGAAATCCAGCTCGTCCGTGAACTGATCTACAACTTTGCCGATTTGACGAACAAAGTCGGGTTCGGTTTGATCGCCTTCTTCGCTGTCAAAACGATGTCGTCGCTATCGTCTTCCAAAGGAAAAACGCTGACGTCC MEEVNLLVLATQYMFWVGFVGMAAGTLYFLVERNSLAPEYRSTATVAALVTFVAAIHYYFMKDAVGTSGLLSEIDGFPTEIRYIDWLVTTPLLLVKFPLLLGLKGRLGRSLLTKLIIADIIMIVGGYIGESSINIAGGFTQLGLWSYLIGCLAWIYIIYLLFTNVTKAAENKPAPIRDALLKMRLFILIGWAIYPIGYAVTLFAPGVEIQLVRELIYNFADLTNKVGFGLIAFFAVKTMSSLSSSKGKTLTS ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGAAGAAGTCAATTTACTCGTCCTTGCCACGCAGTATATGTTTTGGGTCGGTTTCGTCGGAATGGCCGCTGGGACACTCTACTTTTTAGTCGAACGGAATTCCCTTGCACCGGAATACCGATCCACCGCCACCGTCGCCGCACTCGTCACCTTTGTCGCTGCCATCCATTATTATTTCATGAAGGACGCCGTCGGA---------------------------------ACGTCCGGTCTGTTATCGGAAATCGATGGTTTCCCAACAGAAATCCGCTACATCGACTGG------------------------CTCGTCACGACGCCGCTGTTGCTCGTCAAGTTTCCCTTGCTGCTTGGTCTG---------AAA---GGTCGGCTTGGCCGT---TCGTTG------------------------------------TTAACGAAA---CTGATCATCGCCGACATCATCATGATCGTCGGGGGCTATATCGGGGAA---------TCG------------------TCG---------------------------------------------ATC---AACATCGCC---GGCGGT---------TTC---------------------------ACACAACTC------------------GGATTATGGTCGTATCTGATCGGTTGTCTCGCCTGGATTTATATCATCTATCTGCTG---------------TTT------ACG---AACGTCACGAAAGCTGCTGAAAACAAA---------------CCGGCGCCGATT---CGT---GAT---GCG---CTA---TTG---AAGATG---CGGTTGTTCATCCTGATC---------------------------------------------------------------GGTTGG---------GCGATTTATCCGATTGGCTATGCCGTCACGTTGTTTGCG---CCGGGA---------------GTCGAAATCCAGCTCGTCCGTGAACTGATCTACAACTTTGCCGATTTGACGAACAAAGTCGGGTTCGGTTTGATCGCCTTCTTCGCTGTCAAAACGATGTCGTCGCTATCGTCTTCCAAAGGAAAAACGCTGACGTCC--------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------MEEVNLLVLATQYMFWVGFVGMAAGTLYFLVERNSLAPEYRSTATVAALVTFVAAIHYYFMKDAVG-----------TSGLLSEIDGFPTEIRYIDW--------LVTTPLLLVKFPLLLGL---K-GRLGR-SL------------LTK-LIIADIIMIVGGYIGE---S------S---------------I-NIA-GG---F---------TQL------GLWSYLIGCLAWIYIIYLL-----F--T-NVTKAAENK-----PAPI-R-D-A-L-L-KM-RLFILI---------------------GW---AIYPIGYAVTLFA-PG-----VEIQLVRELIYNFADLTNKVGFGLIAFFAVKTMSSLSSSKGKTLTS----------------------------------- [I-Firmicutes-Exiguobacterium]_JX863205 [I-Firmicutes-Exiguobacterium] MALINA_OTU59_384_L_env_samples_JX863205 gi|425477360|gb|JX863205| Uncultured bacterium clone MALINA OTU59 384 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU59 384 L putative proteorhodopsin gene, partial cds JX863205 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 16Aug2009 0m_depth Arctic Ocean marine 69.51 -133.42 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGATCACCACCCCGCTATTGCTGGTGGAGTTCGGTCTCATTGTTGCGATCGCTGGAGCTGCTACCAAGGGCTTCGTTACCCGCATCGTCATTGCTGACATCATCATGATCGCCACGGGTTACCTTGGCGAGATTGGCATGGAAGGCGACATGACCACCGTGCTGTGGTTCGTTATCTCCTCCCTCGCATGGCTCTACATCGTCTACGCAGTGTTCCAGATCAAGATTGCTGGAATGCCAGACTATGCAGCCAGCGCAGTCAAGGTCATGCGCCGCTTTGTGATGCTC WLITTPLLLVEFGLIVAIAGAATKGFVTRIVIADIIMIATGYLGEIGMEGDMTTVLWFVISSLAWLYIVYAVFQIKIAGMPDYAASAVKVMRRFVML ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGATCACCACCCCGCTATTGCTGGTGGAGTTCGGTCTCATTGTTGCGATC---------GCT---GGAGCTGCTACCAAG---GGCTTC------------------------------------GTTACCCGC---ATCGTCATTGCTGACATCATCATGATCGCCACGGGTTACCTTGGCGAG---------ATT------------------GGC---------------------------------------------------------ATG---GAAGGC---------GAC---------------------------ATGACCACC------------------GTGCTGTGG---TTCGTTATCTCCTCCCTCGCATGGCTCTACATCGTCTACGCAGTG---------------TTC------CAG------------ATCAAGATTGCTGGAATG---------------CCAGACTATGCA---GCC---AGC---GCA---GTC---AAG---GTCATG---CGCCGCTTTGTGATGCTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITTPLLLVEFGLIVAI---A-GAATK-GF------------VTR-IVIADIIMIATGYLGE---I------G-------------------M-EG---D---------MTT------VLW-FVISSLAWLYIVYAV-----F--Q----IKIAGM-----PDYA-A-S-A-V-K-VM-RRFVML-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_FJ618959 [I-Firmicutes-Exiguobacterium] PR_108_08_15_env_samples_FJ618959 gi|223046801|gb|FJ618959| Uncultured bacterium clone PR 108 08 15 proteorhodopsin gene, partial cds Uncultured bacterium clone PR 108 08 15 proteorhodopsin gene, partial cds FJ618959 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-juil-09 #na Arctic_Ocean Arctic Ocean marine 71.37 -156.68 Photoheterotrophic microbes in the Arctic Ocean in summer and winter Cottrell,M.T. and Kirchman,D.L. Appl. Environ. Microbiol. 75 (15), 49584966 (2009) 19502441 #na TATGTCGATTGGTTGCTTACCACCCCACTGCTCTTGGTGGAGTTCGGTCTGATTGTCGCAATTGCTGGTGCTGCTAGCAAGGGCTTCGTGCGCCGCATTGTTATTGCGGACATCATCATGATCGCCACCGGTTACCTCGGTGAGGTTGCTACGGAAGGAACCGCCGCCGCGTGGATCTTCTTCCTCATCTCCAGCGCGGCCTGGGTCTACATCGTCTGGGCAGTGTTCCAGATCAAGCTCGATGGCATGCCCGACTACGCAGCCAGCGCAGTGCGTATCATGCGACGCTTCGTGATGCTCGGGTGGGCCATTTAC YVDWLLTTPLLLVEFGLIVAIAGAASKGFVRRIVIADIIMIATGYLGEVATEGTAAAWIFFLISSAAWVYIVWAVFQIKLDGMPDYAASAVRIMRRFVMLGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTCGATTGG------------------------TTGCTTACCACCCCACTGCTCTTGGTGGAGTTCGGTCTGATTGTCGCAATT---------GCT---GGTGCTGCTAGCAAG---GGCTTC------------------------------------GTGCGCCGC---ATTGTTATTGCGGACATCATCATGATCGCCACCGGTTACCTCGGTGAG---------GTT------------------GCT---------------------------------------------------------ACG---GAAGGA---------ACC---------------------------GCCGCCGCG------------------TGGATCTTC---TTCCTCATCTCCAGCGCGGCCTGGGTCTACATCGTCTGGGCAGTG---------------TTC------CAG------------ATCAAGCTCGATGGCATG---------------CCCGACTACGCA---GCC---AGC---GCA---GTG---CGT---ATCATG---CGACGCTTCGTGATGCTC---------------------------------------------------------------GGGTGG---------GCCATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTTPLLLVEFGLIVAI---A-GAASK-GF------------VRR-IVIADIIMIATGYLGE---V------A-------------------T-EG---T---------AAA------WIF-FLISSAAWVYIVWAV-----F--Q----IKLDGM-----PDYA-A-S-A-V-R-IM-RRFVML---------------------GW---AIY--------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_FJ862930 [I-Firmicutes-Exiguobacterium] 21_env_samples_FJ862930 gi|226897404|gb|FJ862930| Uncultured prokaryote clone 21 putative proteorhodopsin gene, partial cds Uncultured prokaryote clone 21 putative proteorhodopsin gene, partial cds FJ862930 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:198431 genomic_DNA other 07-Dec-2009 #na coastal_seawater Atlantic Ocean marine 38.8489 -75.1076 Lightdependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTTGATTGGTTGCTCACCACTCCGTTGCTCCTGGTGGAGTTCGGTTTGATCGTTGCGATTGCTGGAGCTGCTTCCAAGGGCTTCGTTACTCGCCTCGTCATTGCGGACATCATCATGATCGCCACCGGTTACCTCGGTGAGCTCGGTAACACGGGCGACATGTCCACCATCGTGTGGTTCGCCATTTCGTCCCTCGCGTGGCTCTACATCGTGTACGCGGTATTCCAGATCAAGATCGATGGAATGCCCGAATACGCTGCTAGCGCTGTGAAGATCATGCGCCGCTTCGTGATGCTCGGCTGGGCCATTTACGCTCGA VDWLLTTPLLLVEFGLIVAIAGAASKGFVTRLVIADIIMIATGYLGELGNTGDMSTIVWFAISSLAWLYIVYAVFQIKIDGMPEYAASAVKIMRRFVMLGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGATTGG------------------------TTGCTCACCACTCCGTTGCTCCTGGTGGAGTTCGGTTTGATCGTTGCGATT---------GCT---GGAGCTGCTTCCAAG---GGCTTC------------------------------------GTTACTCGC---CTCGTCATTGCGGACATCATCATGATCGCCACCGGTTACCTCGGTGAG---------CTC------------------GGT---------------------------------------------------------AAC---ACGGGC---------GAC---------------------------ATGTCCACC------------------ATCGTGTGG---TTCGCCATTTCGTCCCTCGCGTGGCTCTACATCGTGTACGCGGTA---------------TTC------CAG------------ATCAAGATCGATGGAATG---------------CCCGAATACGCT---GCT---AGC---GCT---GTG---AAG---ATCATG---CGCCGCTTCGTGATGCTC---------------------------------------------------------------GGCTGG---------GCCATTTACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LLTTPLLLVEFGLIVAI---A-GAASK-GF------------VTR-LVIADIIMIATGYLGE---L------G-------------------N-TG---D---------MST------IVW-FAISSLAWLYIVYAV-----F--Q----IKIDGM-----PEYA-A-S-A-V-K-IM-RRFVML---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_DQ203637 [I-Firmicutes-Exiguobacterium] medHO120F6_env_samples_DQ203637 gi|77547722|gb|DQ203637| Uncultured bacterium clone medHO120F6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120F6 predicted proteorhodopsin gene, partial cds DQ203637 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATTGACTGGCTTCTCACCACGCCTCTGCTGCTGGTGGAGTTCGGTTTGATTGTTGCGATTGCTGGCGCCGTCACGAAGGGTTTCATTACCCGCATCGTGATCGCCGACATCATCATGATCGTCACCGGTTACCTCGGTGAGGTCGGAACTGAGGGAGAGATGTCCACCATTGTGTGGTTCGTTATCTCCAGCCTCGCGTGGTTCTACATCGTCTACGCGGTGTTCCAGGTCAAGACAGATGGTATGCCGGACTACGCTGCTCGCGCAGTGAAGGTCATGCGTAACTTCGTCATGATCGGGTGGGCCATTTATCCA SYIDWLLTTPLLLVEFGLIVAIAGAVTKGFITRIVIADIIMIVTGYLGEVGTEGEMSTIVWFVISSLAWFYIVYAVFQVKTDGMPDYAARAVKVMRNFVMIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGACTGG------------------------CTTCTCACCACGCCTCTGCTGCTGGTGGAGTTCGGTTTGATTGTTGCGATT---------GCT---GGCGCCGTCACGAAG---GGTTTC------------------------------------ATTACCCGC---ATCGTGATCGCCGACATCATCATGATCGTCACCGGTTACCTCGGTGAG---------GTC------------------GGA---------------------------------------------------------ACT---GAGGGA---------GAG---------------------------ATGTCCACC------------------ATTGTGTGG---TTCGTTATCTCCAGCCTCGCGTGGTTCTACATCGTCTACGCGGTG---------------TTC------CAG------------GTCAAGACAGATGGTATG---------------CCGGACTACGCT---GCT---CGC---GCA---GTG---AAG---GTCATG---CGTAACTTCGTCATGATC---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LLTTPLLLVEFGLIVAI---A-GAVTK-GF------------ITR-IVIADIIMIVTGYLGE---V------G-------------------T-EG---E---------MST------IVW-FVISSLAWFYIVYAV-----F--Q----VKTDGM-----PDYA-A-R-A-V-K-VM-RNFVMI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_JX863178 [I-Firmicutes-Exiguobacterium] MALINA_OTU15_107_L_env_samples_JX863178 gi|425477306|gb|JX863178| Uncultured bacterium clone MALINA OTU15 107 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU15 107 L putative proteorhodopsin gene, partial cds JX863178 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 08Aug2009 3m_depth Arctic Ocean marine 70.8 -133.73 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGCTCACTACCCCCTTGCTGCTCGTTGAGTTTGGTCTCATCGTTGCTATCGCTGGAGGTGCCAAGGCTGGTCTGGTCACTCGTCTGGTCATCGCCGACCTGATCATGATCATCACCGGTTACCTCGGTGAAGTGGGCGTTGCCGGATCTGCCAGCAACTACATCTACTTCATCATTTCCACTCTGGCTTGGGTCTACATCATCGTGCAGATCCTGCGCATCGATATCTCCTCGGGTCCCGCCTACGCCCAACGTGCAGTCAAGACCATGCGTTGGTTCGTCATCATC WLLTTPLLLVEFGLIVAIAGGAKAGLVTRLVIADLIMIITGYLGEVGVAGSASNYIYFIISTLAWVYIIVQILRIDISSGPAYAQRAVKTMRWFVII ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGCTCACTACCCCCTTGCTGCTCGTTGAGTTTGGTCTCATCGTTGCTATC---------GCT---GGAGGTGCCAAGGCT---GGTCTG------------------------------------GTCACTCGT---CTGGTCATCGCCGACCTGATCATGATCATCACCGGTTACCTCGGTGAA---------GTG------------------GGC---------------------------------------------------------GTT---GCCGGA---------TCT---------------------------GCCAGCAAC------------------TACATCTAC---TTCATCATTTCCACTCTGGCTTGGGTCTACATCATCGTGCAGATC---------------CTG------CGC------------ATCGATATCTCCTCGGGT---------------CCCGCCTACGCC---CAA---CGT---GCA---GTC---AAG---ACCATG---CGTTGGTTCGTCATCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTTPLLLVEFGLIVAI---A-GGAKA-GL------------VTR-LVIADLIMIITGYLGE---V------G-------------------V-AG---S---------ASN------YIY-FIISTLAWVYIIVQI-----L--R----IDISSG-----PAYA-Q-R-A-V-K-TM-RWFVII-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_EU079184 [I-Firmicutes-Exiguobacterium] NASB_28_env_samples_EU079184 gi|156106528|gb|EU079184| Uncultured organism clone NASB 28 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 28 putative proteorhodopsin gene, partial cds EU079184 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGGTATGTCGATTGGTTTATCACAGTACCACTACAGATCATTGAGTTTTATCTGATTCTGAGTGCCGTCACAAAGGTCAGCCCTTCGGTATTCTGGCGTTTGCTCATCGCATCCGTCGTCATGCTAGTAGCTGGTTATATCGGTGAGGCAGGATTCGGAAGTGCCATGATTTACTTCGGTATCGGAATGCTCGCCTGGTTCGCAATACTTTATGAAGTCTTCTTCGGTGTTGCAGGATACATCTGCAGCAAAGTATCTCATGTGCCAACAAAGATCGCATTCAATGGCTTACGTTTTATCGTCACGGTCGGCTGGGCCATCTAT RYVDWFITVPLQIIEFYLILSAVTKVSPSVFWRLLIASVVMLVAGYIGEAGFGSAMIYFGIGMLAWFAILYEVFFGVAGYICSKVSHVPTKIAFNGLRFIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTATGTCGATTGG------------------------TTTATCACAGTACCACTACAGATCATTGAGTTTTATCTGATTCTGAGTGCC---------GTC---ACAAAGGTCAGCCCT---TCGGTA------------------------------------TTCTGGCGT---TTGCTCATCGCATCCGTCGTCATGCTAGTAGCTGGTTATATCGGTGAG---------GCA------------------GGA------TTC---------------------------------GGA------------------------------------------------------------------AGTGCC------------------ATGATTTAC---TTCGGTATCGGAATGCTCGCCTGGTTCGCAATACTTTATGAAGTC---------------TTC------TTC---GGTGTTGCAGGATACATCTGCAGCAAA------GTA---TCTCATGTGCCAACA---AAG---ATC---GCA---TTC---AAT---GGCTTA---CGTTTTATCGTCACGGTC---------------------------------------------------------------GGCTGG---------GCCATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------FITVPLQIIEFYLILSA---V-TKVSP-SV------------FWR-LLIASVVMLVAGYIGE---A------G--F-----------G----------------------SA------MIY-FGIGMLAWFAILYEV-----F--F-GVAGYICSK--V-SHVPT-K-I-A-F-N-GL-RFIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [I-Firmicutes]_EU915785 [I-Firmicutes] PF97542_env_samples_EU915785 gi|229358452|gb|EU915785| Uncultured microorganism clone PF97542 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF97542 putative proteorhodopsin gene, partial cds EU915785 [[proteorhodopsin super-cluster I/Firmicutes-like cluster]] proteorhodopsin super-cluster I Firmicutes-like cluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTCGCCGCTACTGCATTCTTCTTCGTGGAGAGAGCGGACGTCGCCAGGAAGTGGAAGACTTCTCTGACGGTAGCTGGCTTAGTCACTGGTATCGCGTTTTGGCACTATCTCTACATGAGAGGTGTTTGGATCGCAACCGATAGCTCGCCTACGGTTTACAGATACATCGACTGGTTGATCACCGTGCCATTACAGCTCATCGAGTTTTATTTGATCCTCGCTGCGGTAACAATGGTCCGAGGAGCTCTCTTCTGGCAAATCCTGATTGCCTCTTTGGTGATGCTGCTGGGCGGCTACTTCGGCGAGACGGGCGTTTTGAGCGCCGGAGTTGGTTTCTTCATTGGTATGGTTGGATGGGCAGCTATTATCTATCTGATCTTCTTCGGCGAAGCCGCGAAGGTGAACGAAGGAAGCGGTAACGTAAATAGCCAAATGGCCTTCAAAACAATTCGTTTGATTGTCACCGTGGGTTGGGCTATCTAT MVAATAFFFVERADVARKWKTSLTVAGLVTGIAFWHYLYMRGVWIATDSSPTVYRYIDWLITVPLQLIEFYLILAAVTMVRGALFWQILIASLVMLLGGYFGETGVLSAGVGFFIGMVGWAAIIYLIFFGEAAKVNEGSGNVNSQMAFKTIRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCCGCTACTGCATTCTTCTTCGTGGAGAGAGCGGACGTCGCCAGG---AAGTGGAAGACTTCTCTGACGGTAGCTGGCTTAGTCACTGGTATCGCGTTTTGGCACTATCTCTACATGAGAGGTGTTTGGATC------------------------------GCAACC---------------------GATAGCTCGCCTACGGTTTACAGATACATCGACTGG------------------------TTGATCACCGTGCCATTACAGCTCATCGAGTTTTATTTGATCCTCGCTGCG---------GTA---ACAATGGTCCGAGGA---GCTCTC------------------------------------TTCTGGCAA---ATCCTGATTGCCTCTTTGGTGATGCTGCTGGGCGGCTACTTCGGCGAG---------ACG------------------GGC------GTT---------------------------------TTG------------------------------------------------------------------AGCGCC------------------GGAGTTGGT---TTCTTCATTGGTATGGTTGGATGGGCAGCTATTATCTATCTGATC---------------TTC------TTC---GGCGAAGCCGCGAAGGTGAACGAAGGA------AGC---GGTAACGTAAATAGC---CAA---ATG---GCC---TTC---AAA---ACAATT---CGTTTGATTGTCACCGTG---------------------------------------------------------------GGTTGG---------GCTATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFVERADVAR-KWKTSLTVAGLVTGIAFWHYLYMRGVWI----------AT-------DSSPTVYRYIDW--------LITVPLQLIEFYLILAA---V-TMVRG-AL------------FWQ-ILIASLVMLLGGYFGE---T------G--V-----------L----------------------SA------GVG-FFIGMVGWAAIIYLI-----F--F-GEAAKVNEG--S-GNVNS-Q-M-A-F-K-TI-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [I-Firmicutes]_DQ203788 [I-Firmicutes] SS114a0H10_env_samples_DQ203788 gi|77548024|gb|DQ203788| Uncultured bacterium clone SS114a0H10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0H10 predicted proteorhodopsin gene, partial cds DQ203788 [[proteorhodopsin super-cluster I/Firmicutes-like cluster]] proteorhodopsin super-cluster I Firmicutes-like cluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTACATTGATTGGCTTATTACCGTACCTCTTCAAATCGTAGAATTCTACTTGATACTTGCGGCAGTAACCAAAGTGAAAGCAAATCTTTTCTGGCAACTGCTTGGAGCTTCTCTAGTCATGCTGGTTTTCGGATATCTAGGGGAAGCCAATATTCTAGACATGTATTTAGCTTTCGCTATTGGCATGCTGGGATGGTTGTATGTGATTTACCTGGTGTTCTTCGGTGCAGCTAAAAAGCTAAATGCTGAAAGCGGAAATCCTTCGAGCCAAATGGCATTCAATGCAATAAGAATCATAGTGTTAGTAGGTTGGGCCATTTATCCA RYIDWLITVPLQIVEFYLILAAVTKVKANLFWQLLGASLVMLVFGYLGEANILDMYLAFAIGMLGWLYVIYLVFFGAAKKLNAESGNPSSQMAFNAIRIIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATTGATTGG------------------------CTTATTACCGTACCTCTTCAAATCGTAGAATTCTACTTGATACTTGCGGCA---------GTA---ACCAAAGTGAAAGCA---AATCTT------------------------------------TTCTGGCAA---CTGCTTGGAGCTTCTCTAGTCATGCTGGTTTTCGGATATCTAGGGGAA---------GCC------------------AAT------ATT---------------------------------CTA------------------------------------------------------------------GACATG------------------TATTTAGCT---TTCGCTATTGGCATGCTGGGATGGTTGTATGTGATTTACCTGGTG---------------TTC------TTC---GGTGCAGCTAAAAAGCTAAATGCTGAA------AGC---GGAAATCCTTCGAGC---CAA---ATG---GCA---TTC---AAT---GCAATA---AGAATCATAGTGTTAGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TKVKA-NL------------FWQ-LLGASLVMLVFGYLGE---A------N--I-----------L----------------------DM------YLA-FAIGMLGWLYVIYLV-----F--F-GAAKKLNAE--S-GNPSS-Q-M-A-F-N-AI-RIIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Firmicutes]_DQ203844 [I-Firmicutes] SS114a40G8_env_samples_DQ203844 gi|77548136|gb|DQ203844| Uncultured bacterium clone SS114a40G8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40G8 predicted proteorhodopsin gene, partial cds DQ203844 [[proteorhodopsin super-cluster I/Firmicutes-like cluster]] proteorhodopsin super-cluster I Firmicutes-like cluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTTATTACCGTACCTCTTCAAATCGTAGAATTCTACTTGATACTTGCGGCAGTAACCAAAGTGAAAGCAAATCTTTTCTGGCAACTGCTTGGAGCTTCTCTAGTCATGCTGGTTTTCGGATATCTAGGGGAAGCAAATATTCTAGACATGTATTTAGCTTTCGCTATTGGCATGCTGGGATGGTTGTATGTGATTTACCTGGTGTTCTTCGGTGCAGCTAAAAAGCTAAATGCTGAAAGCGGAAATCCTTCGAGCCAAATGGCATTCAATGCAATAAGAATCATAGTGTTAGTAGGTTGGGCCATTTATCCA RYIDWLITVPLQIVEFYLILAAVTKVKANLFWQLLGASLVMLVFGYLGEANILDMYLAFAIGMLGWLYVIYLVFFGAAKKLNAESGNPSSQMAFNAIRIIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTTATTACCGTACCTCTTCAAATCGTAGAATTCTACTTGATACTTGCGGCA---------GTA---ACCAAAGTGAAAGCA---AATCTT------------------------------------TTCTGGCAA---CTGCTTGGAGCTTCTCTAGTCATGCTGGTTTTCGGATATCTAGGGGAA---------GCA------------------AAT------ATT---------------------------------CTA------------------------------------------------------------------GACATG------------------TATTTAGCT---TTCGCTATTGGCATGCTGGGATGGTTGTATGTGATTTACCTGGTG---------------TTC------TTC---GGTGCAGCTAAAAAGCTAAATGCTGAA------AGC---GGAAATCCTTCGAGC---CAA---ATG---GCA---TTC---AAT---GCAATA---AGAATCATAGTGTTAGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TKVKA-NL------------FWQ-LLGASLVMLVFGYLGE---A------N--I-----------L----------------------DM------YLA-FAIGMLGWLYVIYLV-----F--F-GAAKKLNAE--S-GNPSS-Q-M-A-F-N-AI-RIIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Firmicutes]_DQ203822 [I-Firmicutes] SS114a40D7_env_samples_DQ203822 gi|77548092|gb|DQ203822| Uncultured bacterium clone SS114a40D7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40D7 predicted proteorhodopsin gene, partial cds DQ203822 [[proteorhodopsin super-cluster I/Firmicutes-like cluster]] proteorhodopsin super-cluster I Firmicutes-like cluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTTATTACCGTACCTCTTCAAATCGTAGAATTCTACTTGATACTTGCGGCAGTAACCAAAGTGAAAGCAAATCTTTTCTGGCAACTGCTTGGAGCTTCTCTAGTCATGCTGGTTTTCGGATATCTAGGGGAAGCAAATATTCTAGACATGTATTTAGCTTTCGCTATTGGCATGCTGGGATGGTTGTATGTGATTTACCTGGTGTTCTTCGGTGCAGCTAAAAAGCTAAATGCTGAAAGCGGAAATCCTTCGAGCCAAATGGCATTCAATGCAATAAGAATCATAGTGTTAGTAGGTTGGGCCATTTATCCA RYIDWLITVPLQIVEFYLILAAVTKVKANLFWQLLGASLVMLVFGYLGEANILDMYLAFAIGMLGWLYVIYLVFFGAAKKLNAESGNPSSQMAFNAIRIIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTTATTACCGTACCTCTTCAAATCGTAGAATTCTACTTGATACTTGCGGCA---------GTA---ACCAAAGTGAAAGCA---AATCTT------------------------------------TTCTGGCAA---CTGCTTGGAGCTTCTCTAGTCATGCTGGTTTTCGGATATCTAGGGGAA---------GCA------------------AAT------ATT---------------------------------CTA------------------------------------------------------------------GACATG------------------TATTTAGCT---TTCGCTATTGGCATGCTGGGATGGTTGTATGTGATTTACCTGGTG---------------TTC------TTC---GGTGCAGCTAAAAAGCTAAATGCTGAA------AGC---GGAAATCCTTCGAGC---CAA---ATG---GCA---TTC---AAT---GCAATA---AGAATCATAGTGTTAGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TKVKA-NL------------FWQ-LLGASLVMLVFGYLGE---A------N--I-----------L----------------------DM------YLA-FAIGMLGWLYVIYLV-----F--F-GAAKKLNAE--S-GNPSS-Q-M-A-F-N-AI-RIIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Firmicutes]_DQ203738 [I-Firmicutes] SS114a0A1_env_samples_DQ203738 gi|77547924|gb|DQ203738| Uncultured bacterium clone SS114a0A1 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0A1 predicted proteorhodopsin gene, partial cds DQ203738 [[proteorhodopsin super-cluster I/Firmicutes-like cluster]] proteorhodopsin super-cluster I Firmicutes-like cluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGCTACATAGACTGGCTTATTACCGTACCTCTTCAAATCGTAGAATTCTACTTGATACTTGCGGCAGTAACCAAAGTGAAAGCAAATCTTTTCTGGCAACTGCTTGGAGCTTCTCTAGTCATGCTGGTTTTCGGATATCTAGGGGAAGCAAATATTCTAGACATGTATTTAGCTTTCGCTATTGGCATGCTGGGATGGTTGTATGTGATTTACCTGGTGTTCTTCGGTGCAGCTAAAAAGCTAAATGCTGAAAGCGGAAATCCTTCGAGCCAAATGGCATTCAATGCAATAAGAATCATAGTGTTAGTAGGTTGGGCCATATACCCA RYIDWLITVPLQIVEFYLILAAVTKVKANLFWQLLGASLVMLVFGYLGEANILDMYLAFAIGMLGWLYVIYLVFFGAAKKLNAESGNPSSQMAFNAIRIIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTACATAGACTGG------------------------CTTATTACCGTACCTCTTCAAATCGTAGAATTCTACTTGATACTTGCGGCA---------GTA---ACCAAAGTGAAAGCA---AATCTT------------------------------------TTCTGGCAA---CTGCTTGGAGCTTCTCTAGTCATGCTGGTTTTCGGATATCTAGGGGAA---------GCA------------------AAT------ATT---------------------------------CTA------------------------------------------------------------------GACATG------------------TATTTAGCT---TTCGCTATTGGCATGCTGGGATGGTTGTATGTGATTTACCTGGTG---------------TTC------TTC---GGTGCAGCTAAAAAGCTAAATGCTGAA------AGC---GGAAATCCTTCGAGC---CAA---ATG---GCA---TTC---AAT---GCAATA---AGAATCATAGTGTTAGTA---------------------------------------------------------------GGTTGG---------GCCATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TKVKA-NL------------FWQ-LLGASLVMLVFGYLGE---A------N--I-----------L----------------------DM------YLA-FAIGMLGWLYVIYLV-----F--F-GAAKKLNAE--S-GNPSS-Q-M-A-F-N-AI-RIIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Firmicutes]_DQ203838 [I-Firmicutes] SS114a40F9_env_samples_DQ203838 gi|77548124|gb|DQ203838| Uncultured bacterium clone SS114a40F9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40F9 predicted proteorhodopsin gene, partial cds DQ203838 [[proteorhodopsin super-cluster I/Firmicutes-like cluster]] proteorhodopsin super-cluster I Firmicutes-like cluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTTATTACCGTACCTCTTCAAATCGTAGAATTCTACTTGATACTTGCGGCAGTAACCAAAGTGAAAGCAAATCTTTTCTGGCAACTGCTTGGAGCTTCTCTAGTCATGCTGGTTTTCGGATATCTAGGGGAAGCAAATATTCTAGACATGTATTTAGCTTTCGCTATTGGCATGCTGGGATGGTTGTATGTGATTTACCTGGTGTTCTTCGGTGCAGCTAAAAAGCTAAATGCTGAAAGCGGAAATCCTTCGAGCCAAATGGCATTCAATGCAATAAGAATCATAGTGTTAGTAGGGTGGGCCATTTATCCA RYIDWLITVPLQIVEFYLILAAVTKVKANLFWQLLGASLVMLVFGYLGEANILDMYLAFAIGMLGWLYVIYLVFFGAAKKLNAESGNPSSQMAFNAIRIIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTTATTACCGTACCTCTTCAAATCGTAGAATTCTACTTGATACTTGCGGCA---------GTA---ACCAAAGTGAAAGCA---AATCTT------------------------------------TTCTGGCAA---CTGCTTGGAGCTTCTCTAGTCATGCTGGTTTTCGGATATCTAGGGGAA---------GCA------------------AAT------ATT---------------------------------CTA------------------------------------------------------------------GACATG------------------TATTTAGCT---TTCGCTATTGGCATGCTGGGATGGTTGTATGTGATTTACCTGGTG---------------TTC------TTC---GGTGCAGCTAAAAAGCTAAATGCTGAA------AGC---GGAAATCCTTCGAGC---CAA---ATG---GCA---TTC---AAT---GCAATA---AGAATCATAGTGTTAGTA---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TKVKA-NL------------FWQ-LLGASLVMLVFGYLGE---A------N--I-----------L----------------------DM------YLA-FAIGMLGWLYVIYLV-----F--F-GAAKKLNAE--S-GNPSS-Q-M-A-F-N-AI-RIIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Firmicutes]_DQ422232 [I-Firmicutes] clone_med-0m-h10_DQ422232 gi|90023984|gb|DQ422232| Uncultured bacterium clone med-0m-h10 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-0m-h10 putative proteorhodopsin gene, partial cds. DQ422232 [[proteorhodopsin super-cluster I/Firmicutes-like cluster]] proteorhodopsin super-cluster I Firmicutes-like cluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 0m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTTATTACAGTCCCCCTTCAAATCGTAGAATTCTATCTCATACTTACTGCGGTAACCAAAGTTAAGGCAAATCTATTCTGGCAGCTACTAGCGGCCTCTCTAGTCATGCTTGTTTTTGGTTATCTAGGAGAAGCCAACATTCTCAACATATACATAGCTTTCGCTATTGGCATGCTTGGGTGGTTATATGTAATTTATTTGGTCTTCTTCGGAGCCGCAAAAAAAGTAAATGCACAGAGCGGAAACGCCTCCAGTCAAATGGCATTCAATGCAATACGAATGATAGTACTCGTTGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYLILTAVTKVKANLFWQLLAASLVMLVFGYLGEANILNIYIAFAIGMLGWLYVIYLVFFGAAKKVNAQSGNASSQMAFNAIRMIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTTATTACAGTCCCCCTTCAAATCGTAGAATTCTATCTCATACTTACTGCG---------GTA---ACCAAAGTTAAGGCA---AATCTA------------------------------------TTCTGGCAG---CTACTAGCGGCCTCTCTAGTCATGCTTGTTTTTGGTTATCTAGGAGAA---------GCC------------------AAC------ATT---------------------------------CTC------------------------------------------------------------------AACATA------------------TACATAGCT---TTCGCTATTGGCATGCTTGGGTGGTTATATGTAATTTATTTGGTC---------------TTC------TTC---GGAGCCGCAAAAAAAGTAAATGCACAG------AGC---GGAAACGCCTCCAGT---CAA---ATG---GCA---TTC---AAT---GCAATA---CGAATGATAGTACTCGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILTA---V-TKVKA-NL------------FWQ-LLAASLVMLVFGYLGE---A------N--I-----------L----------------------NI------YIA-FAIGMLGWLYVIYLV-----F--F-GAAKKVNAQ--S-GNASS-Q-M-A-F-N-AI-RMIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_EU079223 [I-Firmicutes-a] NASB_90_env_samples_EU079223 gi|156106605|gb|EU079223| Uncultured organism clone NASB 90 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 90 putative proteorhodopsin gene, partial cds EU079223 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGCTACATTGATTGGCTGATAACCGTACCATTACAAATTGTTGAATTCTATTTGATATTAGCCGCTGTGACTGCAGTCCGAACCGGACTCTTTTGGCAGCTTCTCGGGGCATCAGTTGTAATGCTCCTAGGCGGTTATTTAGGCGAAACGGCAGTGATCAGCCCTACAATCGGGTTCGTAGTGGGCATGGCCGGGTGGATTTATATTATCTACCTAATTTTTGCCGGAGAGGCTAATCAGGTCTCCGAAGGGTCGGGTAATGCAGCAAGTCAGAGCGCTTTTAAAACGCTGCGACTCATTGTGACAGTGGGCTGGGCTATCTAT RYIDWLITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSEGSGNAASQSAFKTLRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTACATTGATTGG------------------------CTGATAACCGTACCATTACAAATTGTTGAATTCTATTTGATATTAGCCGCT---------GTG---ACTGCAGTCCGAACC---GGACTC------------------------------------TTTTGGCAG---CTTCTCGGGGCATCAGTTGTAATGCTCCTAGGCGGTTATTTAGGCGAA---------ACG------------------GCA------GTG---------------------------------ATC------------------------------------------------------------------AGCCCT------------------ACAATCGGG---TTCGTAGTGGGCATGGCCGGGTGGATTTATATTATCTACCTAATT---------------TTT------GCC---GGAGAGGCTAATCAGGTCTCCGAAGGG------TCG---GGTAATGCAGCAAGT---CAG---AGC---GCT---TTT---AAA---ACGCTG---CGACTCATTGTGACAGTG---------------------------------------------------------------GGCTGG---------GCTATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSEG--S-GNAAS-Q-S-A-F-K-TL-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_DQ203829 [I-Firmicutes-a] SS114a40E8_env_samples_DQ203829 gi|77548106|gb|DQ203829| Uncultured bacterium clone SS114a40E8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40E8 predicted proteorhodopsin gene, partial cds DQ203829 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATAGACTGGCTGATAACCGTACCATTACAAATTGTAGAATTCTATCTAATACTAGCCGCTGTGACTGCAGTCCGAACCGGACTCTTTTGGCAGCTTCTCGGAGCATCAGTTGTAATGCTCTTAGGGGGTTATCTCGGCGAAACGGCAGTGATCAGCCCAACAATTGGGTTCGTAGTGGGCATGGCGGGGTGGATTTACATCATATACCTCATTTTTGCCGGAGAGGCTAACCAAGTCTCGGAAGGATCGGGAAATGCAGCAAGTCAGAGCGCTTTTAAAACGCTGCGTCTCATTGTGACGGTGGGGTGGGCCATATACCCA RYIDWLITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSEGSGNAASQSAFKTLRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATAACCGTACCATTACAAATTGTAGAATTCTATCTAATACTAGCCGCT---------GTG---ACTGCAGTCCGAACC---GGACTC------------------------------------TTTTGGCAG---CTTCTCGGAGCATCAGTTGTAATGCTCTTAGGGGGTTATCTCGGCGAA---------ACG------------------GCA------GTG---------------------------------ATC------------------------------------------------------------------AGCCCA------------------ACAATTGGG---TTCGTAGTGGGCATGGCGGGGTGGATTTACATCATATACCTCATT---------------TTT------GCC---GGAGAGGCTAACCAAGTCTCGGAAGGA------TCG---GGAAATGCAGCAAGT---CAG---AGC---GCT---TTT---AAA---ACGCTG---CGTCTCATTGTGACGGTG---------------------------------------------------------------GGGTGG---------GCCATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSEG--S-GNAAS-Q-S-A-F-K-TL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_DQ203331 [I-Firmicutes-a] SS114a80F8_env_samples_DQ203331 gi|77547110|gb|DQ203331| Uncultured bacterium clone SS114a80F8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a80F8 predicted proteorhodopsin gene, partial cds DQ203331 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_80m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_2003 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATAGACTGGCTGATAACCGTACCATTACAAATTGTAGAATTCTATCTAATACTAGCCGCTGTGACTGCAGTCCGAACCGGACTCTTTTGGCAGCTTCTCGGAGCATCAGTTGTAATGCTCTTAGGGGGTTATCTCGGCGAAACGGCAGTGATCAGCCCAACAATTGGGTTCGTAGCGGGCATGGCGGGGTGGATTTACATCATATACCTCATTTTTGCCGGAGAGGCTAACCAAGTCTCGGAAGGATCGGGAAATGCAGCAAGTCAGAGCGCTTTTAAAACGCTGCGTCTCATTGTGACGGTGGGGTGGGCCATATACCCA SYIDWLITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVAGMAGWIYIIYLIFAGEANQVSEGSGNAASQSAFKTLRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATAGACTGG------------------------CTGATAACCGTACCATTACAAATTGTAGAATTCTATCTAATACTAGCCGCT---------GTG---ACTGCAGTCCGAACC---GGACTC------------------------------------TTTTGGCAG---CTTCTCGGAGCATCAGTTGTAATGCTCTTAGGGGGTTATCTCGGCGAA---------ACG------------------GCA------GTG---------------------------------ATC------------------------------------------------------------------AGCCCA------------------ACAATTGGG---TTCGTAGCGGGCATGGCGGGGTGGATTTACATCATATACCTCATT---------------TTT------GCC---GGAGAGGCTAACCAAGTCTCGGAAGGA------TCG---GGAAATGCAGCAAGT---CAG---AGC---GCT---TTT---AAA---ACGCTG---CGTCTCATTGTGACGGTG---------------------------------------------------------------GGGTGG---------GCCATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVAGMAGWIYIIYLI-----F--A-GEANQVSEG--S-GNAAS-Q-S-A-F-K-TL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_DQ339250 [I-Firmicutes-a] clone_S-S80M-A10_DQ339250 gi|85681475|gb|DQ339250| Uncultured bacterium clone S-S80M-A10 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-A10 predicted proteorhodopsin gene, partial cds. DQ339250 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATAACCGTACCATTACAAATTGTAGAATTCTATCTAATACTAGCCGCTGTGACTGCAGTCCGAACCGGACTCTTTTGGCAGCTTCTCGGAGCATCAGTTGTAATGCTCTTAGGGGGTTATCTCGGCGAAACGGCAGTGATCAGCCCAACAATTGGGTTCGTAGTGGGCATGGCGGGGTGGATTTACATCATATACCTCATTTTTGCCGGAGAGGCTAACCAAGTCTCGGAAGGATCGGGAAATGCAGCAAGTCAGAGCGCTTTTAAAACGCTGCGTCTCATTGTGACGGTGGGGTGGGCAATATACCCA RYIDWLITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSEGSGNAASQSAFKTLRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATAACCGTACCATTACAAATTGTAGAATTCTATCTAATACTAGCCGCT---------GTG---ACTGCAGTCCGAACC---GGACTC------------------------------------TTTTGGCAG---CTTCTCGGAGCATCAGTTGTAATGCTCTTAGGGGGTTATCTCGGCGAA---------ACG------------------GCA------GTG---------------------------------ATC------------------------------------------------------------------AGCCCA------------------ACAATTGGG---TTCGTAGTGGGCATGGCGGGGTGGATTTACATCATATACCTCATT---------------TTT------GCC---GGAGAGGCTAACCAAGTCTCGGAAGGA------TCG---GGAAATGCAGCAAGT---CAG---AGC---GCT---TTT---AAA---ACGCTG---CGTCTCATTGTGACGGTG---------------------------------------------------------------GGGTGG---------GCAATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSEG--S-GNAAS-Q-S-A-F-K-TL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_DQ203320 [I-Firmicutes-a] SS114a80D8_env_samples_DQ203320 gi|77547088|gb|DQ203320| Uncultured bacterium clone SS114a80D8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a80D8 predicted proteorhodopsin gene, partial cds DQ203320 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_80m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_2003 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTGATAACCGTACCATTACAAATTGTAGAATTCTATCTAATACTAGCCGCTGTGACTGCAGTCCGAACCGGACTCTTTTGGCAGCTTCTCGGAGCATCAGTTGTAATGCTCTTAGGGGGTTATCTCGGCGAAACGGCAGTGATCAGCCCAACAATTGGGTTCGTAGTGGGCATGGCGGGGTGGATTTACATCATATACCTCATTTTTGCCGGAGAGGCTAACCAAGTCTCGGAAGGATCGGGAAATGCAGCAAGTCAGAGCGCTTTTAAAACGCTGCGTCTCATTGTGACGGTGGGGTGGGCCATATATCCA RYIDWLITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSEGSGNAASQSAFKTLRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTGATAACCGTACCATTACAAATTGTAGAATTCTATCTAATACTAGCCGCT---------GTG---ACTGCAGTCCGAACC---GGACTC------------------------------------TTTTGGCAG---CTTCTCGGAGCATCAGTTGTAATGCTCTTAGGGGGTTATCTCGGCGAA---------ACG------------------GCA------GTG---------------------------------ATC------------------------------------------------------------------AGCCCA------------------ACAATTGGG---TTCGTAGTGGGCATGGCGGGGTGGATTTACATCATATACCTCATT---------------TTT------GCC---GGAGAGGCTAACCAAGTCTCGGAAGGA------TCG---GGAAATGCAGCAAGT---CAG---AGC---GCT---TTT---AAA---ACGCTG---CGTCTCATTGTGACGGTG---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSEG--S-GNAAS-Q-S-A-F-K-TL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_DQ203774 [I-Firmicutes-a] SS114a0F10_env_samples_DQ203774 gi|77547996|gb|DQ203774| Uncultured bacterium clone SS114a0F10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0F10 predicted proteorhodopsin gene, partial cds DQ203774 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGACTGGCTGATAACCGTACCATTACAAATTGTAGAATTCTATCTAATACTAGCCGCTGTGACTGCAGTCCGAACCGGACTCTTTTGGCAGCTTCTCGGAGCATCAGTTGTAATGCTCTTAGGGGGTTATCTCGGCGAAACGGCAGTGATCAGCCCAACAATTGGGTTCGTAGTGGGCATGGCGGGGTGGATTTACATCATATACCTCATTTTTGCCGGAGAGGCTAACCAAGTCTCGGAAGGATCGGGAAATGCAGCAAGTCAGAGCGCTTTTAAAACGCTGCGTCTCATTGTGACGGTGGGGTGGGCAATCTATCCA RYIDWLITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSEGSGNAASQSAFKTLRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGACTGG------------------------CTGATAACCGTACCATTACAAATTGTAGAATTCTATCTAATACTAGCCGCT---------GTG---ACTGCAGTCCGAACC---GGACTC------------------------------------TTTTGGCAG---CTTCTCGGAGCATCAGTTGTAATGCTCTTAGGGGGTTATCTCGGCGAA---------ACG------------------GCA------GTG---------------------------------ATC------------------------------------------------------------------AGCCCA------------------ACAATTGGG---TTCGTAGTGGGCATGGCGGGGTGGATTTACATCATATACCTCATT---------------TTT------GCC---GGAGAGGCTAACCAAGTCTCGGAAGGA------TCG---GGAAATGCAGCAAGT---CAG---AGC---GCT---TTT---AAA---ACGCTG---CGTCTCATTGTGACGGTG---------------------------------------------------------------GGGTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSEG--S-GNAAS-Q-S-A-F-K-TL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_DQ203825 [I-Firmicutes-a] SS114a40E11_env_samples_DQ203825 gi|77548098|gb|DQ203825| Uncultured bacterium clone SS114a40E11 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40E11 predicted proteorhodopsin gene, partial cds DQ203825 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTACATAGATTGGCTGATAACCGTACCGTTACAAATTGTAGAATTCTATCTAATACTAGCCGCTGTGACTGCAGTCCGAACCGGACTTTTTTGGCAGCTTCTCGGAGCATCAGTTGTAATGCTCTTGGGGGGTTATCTCGGCGAAACGGCAGTGATCAGCCCAACAATTGGTTTCGTAGTGGGCATGGCAGGGTGGATTTATATCATTTATCTAATTTTTGCCGGAGAGGCTAACCAAGTCTCGGAAGGTTCGGGAAATGCAGCAAGTCAGAGCGCTTTTAAAACGCTGCGGCTCATTGTAACGGTGGGGTGGGCAATATATCCA SYIDWLITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSEGSGNAASQSAFKTLRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATAGATTGG------------------------CTGATAACCGTACCGTTACAAATTGTAGAATTCTATCTAATACTAGCCGCT---------GTG---ACTGCAGTCCGAACC---GGACTT------------------------------------TTTTGGCAG---CTTCTCGGAGCATCAGTTGTAATGCTCTTGGGGGGTTATCTCGGCGAA---------ACG------------------GCA------GTG---------------------------------ATC------------------------------------------------------------------AGCCCA------------------ACAATTGGT---TTCGTAGTGGGCATGGCAGGGTGGATTTATATCATTTATCTAATT---------------TTT------GCC---GGAGAGGCTAACCAAGTCTCGGAAGGT------TCG---GGAAATGCAGCAAGT---CAG---AGC---GCT---TTT---AAA---ACGCTG---CGGCTCATTGTAACGGTG---------------------------------------------------------------GGGTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSEG--S-GNAAS-Q-S-A-F-K-TL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_DQ203770 [I-Firmicutes-a] SS114a0E5_env_samples_DQ203770 gi|77547988|gb|DQ203770| Uncultured bacterium clone SS114a0E5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0E5 predicted proteorhodopsin gene, partial cds DQ203770 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGATTGGCTGATAACCGTACCGTTACAAATTGTAGAATTCTATCTAATACTAGCCGCTGTGACTGCAGTCCGAACCGGGCTCTTTTGGCAGCTTCTCGGAGCATCAGTTGTAATGCTCTTAGGGGGTTATCTCGGCGAAACGGCAGTGATCAGCCCAACAATTGGGTTCGTAGTGGGCATGGCAGGGTGGATTTACATCATTTACCTCATTTTTGCCGGAGAGGCTAATAAAGTCTCGGAAGGTTCGGGAAATGCAGCAAGTCAGAGCGCTTTCAAAACGCTGCGACTCATTGTAACAGTGGGCTGGGCAATTTACCCA SYIDWLITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANKVSEGSGNAASQSAFKTLRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGATTGG------------------------CTGATAACCGTACCGTTACAAATTGTAGAATTCTATCTAATACTAGCCGCT---------GTG---ACTGCAGTCCGAACC---GGGCTC------------------------------------TTTTGGCAG---CTTCTCGGAGCATCAGTTGTAATGCTCTTAGGGGGTTATCTCGGCGAA---------ACG------------------GCA------GTG---------------------------------ATC------------------------------------------------------------------AGCCCA------------------ACAATTGGG---TTCGTAGTGGGCATGGCAGGGTGGATTTACATCATTTACCTCATT---------------TTT------GCC---GGAGAGGCTAATAAAGTCTCGGAAGGT------TCG---GGAAATGCAGCAAGT---CAG---AGC---GCT---TTC---AAA---ACGCTG---CGACTCATTGTAACAGTG---------------------------------------------------------------GGCTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANKVSEG--S-GNAAS-Q-S-A-F-K-TL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_DQ203836 [I-Firmicutes-a] SS114a40F7_env_samples_DQ203836 gi|77548120|gb|DQ203836| Uncultured bacterium clone SS114a40F7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40F7 predicted proteorhodopsin gene, partial cds DQ203836 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTGATAACCGTACCGTTACAAATTGTAGAATTCTATCTAATACTAGCCGCTGTGACTGCAGTCCGAACCGGGCTCTTTTGGCAGCTTCTCGGAGCATCAGTTGTAATGCTCTTAGGGGGTTATCTCGGCGAAACGGCAGTGATCAGCCCAACAATTGGGTTCGTAGTGGGCATGGCAGGGTGGATTTACATCATTTACCTCATTTTTGCCGGAGAGGCTAATAAAGTCTCGGAAGGTTCGGGAAATGCAGCAAGTCAGAGCGCTTTCAAAACGCTGCGACTCATTGTAACAGTGGGGTGGGCCATCTATCCA RYIDWLITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANKVSEGSGNAASQSAFKTLRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTGATAACCGTACCGTTACAAATTGTAGAATTCTATCTAATACTAGCCGCT---------GTG---ACTGCAGTCCGAACC---GGGCTC------------------------------------TTTTGGCAG---CTTCTCGGAGCATCAGTTGTAATGCTCTTAGGGGGTTATCTCGGCGAA---------ACG------------------GCA------GTG---------------------------------ATC------------------------------------------------------------------AGCCCA------------------ACAATTGGG---TTCGTAGTGGGCATGGCAGGGTGGATTTACATCATTTACCTCATT---------------TTT------GCC---GGAGAGGCTAATAAAGTCTCGGAAGGT------TCG---GGAAATGCAGCAAGT---CAG---AGC---GCT---TTC---AAA---ACGCTG---CGACTCATTGTAACAGTG---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANKVSEG--S-GNAAS-Q-S-A-F-K-TL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_DQ203780 [I-Firmicutes-a] SS114a0F8_env_samples_DQ203780 gi|77548008|gb|DQ203780| Uncultured bacterium clone SS114a0F8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0F8 predicted proteorhodopsin gene, partial cds DQ203780 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTGATAACCGTACCGTTACAAATTGTAGAATTCTATCTAATACTAGCCGCTGTGACTGCAGTCCGAACCGGACTCTTTTGGCAGCTTCTCGGAGCATCAGTTGTAATGCTCTTAGGGGGTTATCTCGGCGAAACGGCAGTGATCAGCCCAACAATTGGGTTCGTAGTGGGCATGGCAGGGTGGATTTACATCATTTACCTCATTTTTGCCGGAGAGGCTAATAAAGTCTCGGAAGGTTCGGGAAATGCAGCAAGTCAGAGCGCTTTCAAAACGCTGCGACTCATTGTAACAGTGGGGTGGGCCATTTATCCA RYIDWLITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANKVSEGSGNAASQSAFKTLRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTGATAACCGTACCGTTACAAATTGTAGAATTCTATCTAATACTAGCCGCT---------GTG---ACTGCAGTCCGAACC---GGACTC------------------------------------TTTTGGCAG---CTTCTCGGAGCATCAGTTGTAATGCTCTTAGGGGGTTATCTCGGCGAA---------ACG------------------GCA------GTG---------------------------------ATC------------------------------------------------------------------AGCCCA------------------ACAATTGGG---TTCGTAGTGGGCATGGCAGGGTGGATTTACATCATTTACCTCATT---------------TTT------GCC---GGAGAGGCTAATAAAGTCTCGGAAGGT------TCG---GGAAATGCAGCAAGT---CAG---AGC---GCT---TTC---AAA---ACGCTG---CGACTCATTGTAACAGTG---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANKVSEG--S-GNAAS-Q-S-A-F-K-TL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_DQ203755 [I-Firmicutes-a] SS114a0C4_env_samples_DQ203755 gi|77547958|gb|DQ203755| Uncultured bacterium clone SS114a0C4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0C4 predicted proteorhodopsin gene, partial cds DQ203755 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTACATAGACTGGCTGATAACCGTACCATTACAGATTGTTGAATTCTATTTAATACTAGCCGCTGTGACCGCAGTCCGAACCGGACTCTTTTGGCAGCTTCTAGGGGCGTCAGTTGTAATGCTCCTAGGCGGTTATCTCGGCGAAACGGCAGTGATCAGCCCAACAATTGGGTTCGTAGTGGGCATGGCCGGGTGGATTTATATTATCTACCTAATTTTTGCCGGAGAGGCTAATCAAGTCTCGGAAAATTCGGGAAATGCAGCAAGTCAGAGCGCTTTTAAAACGCTGCGACTCATTGTAACAGTGGGGTGGGCAATATATCCA RYIDWLITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSENSGNAASQSAFKTLRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATAGACTGG------------------------CTGATAACCGTACCATTACAGATTGTTGAATTCTATTTAATACTAGCCGCT---------GTG---ACCGCAGTCCGAACC---GGACTC------------------------------------TTTTGGCAG---CTTCTAGGGGCGTCAGTTGTAATGCTCCTAGGCGGTTATCTCGGCGAA---------ACG------------------GCA------GTG---------------------------------ATC------------------------------------------------------------------AGCCCA------------------ACAATTGGG---TTCGTAGTGGGCATGGCCGGGTGGATTTATATTATCTACCTAATT---------------TTT------GCC---GGAGAGGCTAATCAAGTCTCGGAAAAT------TCG---GGAAATGCAGCAAGT---CAG---AGC---GCT---TTT---AAA---ACGCTG---CGACTCATTGTAACAGTG---------------------------------------------------------------GGGTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSEN--S-GNAAS-Q-S-A-F-K-TL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_DQ339307 [I-Firmicutes-a] clone_S-S80M-F4_DQ339307 gi|85681587|gb|DQ339307| Uncultured bacterium clone S-S80M-F4 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-F4 predicted proteorhodopsin gene, partial cds. DQ339307 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATAACCGTACCATTACAGATTGTTGAATTCTATTTAATACTAGCCGCTGTGACCGCAGTCCGAACCGGACTCTTTTGGCAGCTTCTAGGGGCGTCAGTTGTAATGCTCCTAGGCGGTTATCTCGGCGAAACGGCAGTGATCAGCCCAACAATTGGGTTCGTAGTGGGCATGGCCGGGTGGATTTACATTATCTACCTAATTTTTGCCGGAGAGGCTAATCAAGTCTCGGAAAATTCGGGAAATGCAGCAAGTCAGAGCGCTTTTAAAACGCTGCGACTCATTGTAACAGTGGGGTGGGCAATTTACCCA RYIDWLITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSENSGNAASQSAFKTLRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATAACCGTACCATTACAGATTGTTGAATTCTATTTAATACTAGCCGCT---------GTG---ACCGCAGTCCGAACC---GGACTC------------------------------------TTTTGGCAG---CTTCTAGGGGCGTCAGTTGTAATGCTCCTAGGCGGTTATCTCGGCGAA---------ACG------------------GCA------GTG---------------------------------ATC------------------------------------------------------------------AGCCCA------------------ACAATTGGG---TTCGTAGTGGGCATGGCCGGGTGGATTTACATTATCTACCTAATT---------------TTT------GCC---GGAGAGGCTAATCAAGTCTCGGAAAAT------TCG---GGAAATGCAGCAAGT---CAG---AGC---GCT---TTT---AAA---ACGCTG---CGACTCATTGTAACAGTG---------------------------------------------------------------GGGTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSEN--S-GNAAS-Q-S-A-F-K-TL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_DQ203326 [I-Firmicutes-a] SS114a80E5_env_samples_DQ203326 gi|77547100|gb|DQ203326| Uncultured bacterium clone SS114a80E5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a80E5 predicted proteorhodopsin gene, partial cds DQ203326 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_80m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_2003 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATCGACTGGCTGATAACCGTACCATTACAGATTGTTGAATTCTATTTAATACTAGCCGCTGTGACCGCAGTCCGAACCGGACTCTTTTGGCAGCTTCTAGGGGCGTCAGTTGTAATGCTCCTAGGCGGTTATCTCGGCGAAACGGCAGTGATCAGCCCAACAATTGGGTTCGTAGTGGGCATGGCCGGGTGGATTTATATTATCTACCTAATTTTTGCCGGAGAGGCTAATCAAGTCTCGGAAAATTCGGGAAATGCAGCAAGTCAGAGCGCTTTTAAAACGCTGCGACTCATTGTAACAGTGGGGTGGGCCATATATCCA SYIDWLITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSENSGNAASQSAFKTLRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATCGACTGG------------------------CTGATAACCGTACCATTACAGATTGTTGAATTCTATTTAATACTAGCCGCT---------GTG---ACCGCAGTCCGAACC---GGACTC------------------------------------TTTTGGCAG---CTTCTAGGGGCGTCAGTTGTAATGCTCCTAGGCGGTTATCTCGGCGAA---------ACG------------------GCA------GTG---------------------------------ATC------------------------------------------------------------------AGCCCA------------------ACAATTGGG---TTCGTAGTGGGCATGGCCGGGTGGATTTATATTATCTACCTAATT---------------TTT------GCC---GGAGAGGCTAATCAAGTCTCGGAAAAT------TCG---GGAAATGCAGCAAGT---CAG---AGC---GCT---TTT---AAA---ACGCTG---CGACTCATTGTAACAGTG---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSEN--S-GNAAS-Q-S-A-F-K-TL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_DQ339277 [I-Firmicutes-a] clone_S-S80M-C7_DQ339277 gi|85681529|gb|DQ339277| Uncultured bacterium clone S-S80M-C7 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-C7 predicted proteorhodopsin gene, partial cds. DQ339277 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATAACCGTACCATTACAGATTGTTGAATTCTATTTAATACTAGCCGCTGTGACCGCAGTCCGAACCGGACTCTTTTGGCAGCTTCTAGGGGCGTCAGTTGTAATGCTCCTAGGCGGTTATCTCGGCGAAACGGCAGTGATCAGCCCAACAATTGGGTTCGTAGTGGGCATGGCCGGGTGGATTTATATTATCTACCTAATTTTTGCCGGAGAGGCTAATCAAGTCTCGGAAAATTCGGGAAATGCAGCAAGTCAGAGCGCTTTTAAAACGCTGCGACTCATTGTAACAGTGGGGTGGGCCATCTATCCA RYIDWLITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSENSGNAASQSAFKTLRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATAACCGTACCATTACAGATTGTTGAATTCTATTTAATACTAGCCGCT---------GTG---ACCGCAGTCCGAACC---GGACTC------------------------------------TTTTGGCAG---CTTCTAGGGGCGTCAGTTGTAATGCTCCTAGGCGGTTATCTCGGCGAA---------ACG------------------GCA------GTG---------------------------------ATC------------------------------------------------------------------AGCCCA------------------ACAATTGGG---TTCGTAGTGGGCATGGCCGGGTGGATTTATATTATCTACCTAATT---------------TTT------GCC---GGAGAGGCTAATCAAGTCTCGGAAAAT------TCG---GGAAATGCAGCAAGT---CAG---AGC---GCT---TTT---AAA---ACGCTG---CGACTCATTGTAACAGTG---------------------------------------------------------------GGGTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSEN--S-GNAAS-Q-S-A-F-K-TL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_DQ339327 [I-Firmicutes-a] clone_S-S80M-H2_DQ339327 gi|85681627|gb|DQ339327| Uncultured bacterium clone S-S80M-H2 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-H2 predicted proteorhodopsin gene, partial cds. DQ339327 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTGATAACCGTACCATTACAGATTGTTGAATTCTATTTAATACTAGCCGCTGTGACCGCAGTCCGAACCGGACTCTTTTGGCAGCTTCTCGGGGCGTCAGTTGTAATGCTCCTGGGCGGTTATCTCGGCGAAACGGCAGTGATCAGCCCAACAATTGGGTTCGTAGTGGGCATGGCCGGGTGGATTTATATTATCTACCTAATTTTTGCCGGAGAGGCTAATCAAGTCTCGGAAAATTCGGGAAATGCAGCAAGTCAGAGCGCTTTTAAAACGCTGCGACTCATTGTAACGGTGGGGTGGGCCATATATCCA RYIDWLITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSENSGNAASQSAFKTLRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATAACCGTACCATTACAGATTGTTGAATTCTATTTAATACTAGCCGCT---------GTG---ACCGCAGTCCGAACC---GGACTC------------------------------------TTTTGGCAG---CTTCTCGGGGCGTCAGTTGTAATGCTCCTGGGCGGTTATCTCGGCGAA---------ACG------------------GCA------GTG---------------------------------ATC------------------------------------------------------------------AGCCCA------------------ACAATTGGG---TTCGTAGTGGGCATGGCCGGGTGGATTTATATTATCTACCTAATT---------------TTT------GCC---GGAGAGGCTAATCAAGTCTCGGAAAAT------TCG---GGAAATGCAGCAAGT---CAG---AGC---GCT---TTT---AAA---ACGCTG---CGACTCATTGTAACGGTG---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSEN--S-GNAAS-Q-S-A-F-K-TL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_DQ203759 [I-Firmicutes-a] SS114a0C9_env_samples_DQ203759 gi|77547966|gb|DQ203759| Uncultured bacterium clone SS114a0C9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0C9 predicted proteorhodopsin gene, partial cds DQ203759 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTATATCGACTGGCTGATAACCGTACCATTACAGATTGTTGAATTCTATTTAATACTAGCCGCTGTGACCGCAGTCCGAACCGGACTCTTTTGGCAGCTTCTCGGGGCGTCAGTTGTAATGCTCCTGGGCGGTTATCTCGGCGAAACGGCAGTGATCAGCCCAACAATTGGGTTCGTAGTGGGCATGGCCGGGTGGATTTATATTATCTACCTAATTTTTGCCGGAGAGGCTAATCAAGTCTCGGAAAATTCGGGAAATGCAGCAAGTCAGAGCGCTTTTAAAACGCTGCGACTCATTGTAACAGTGGGGTGGGCCTATATC RYIDWLITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSENSGNAASQSAFKTLRLIVTVGWAYI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTATATCGACTGG------------------------CTGATAACCGTACCATTACAGATTGTTGAATTCTATTTAATACTAGCCGCT---------GTG---ACCGCAGTCCGAACC---GGACTC------------------------------------TTTTGGCAG---CTTCTCGGGGCGTCAGTTGTAATGCTCCTGGGCGGTTATCTCGGCGAA---------ACG------------------GCA------GTG---------------------------------ATC------------------------------------------------------------------AGCCCA------------------ACAATTGGG---TTCGTAGTGGGCATGGCCGGGTGGATTTATATTATCTACCTAATT---------------TTT------GCC---GGAGAGGCTAATCAAGTCTCGGAAAAT------TCG---GGAAATGCAGCAAGT---CAG---AGC---GCT---TTT---AAA---ACGCTG---CGACTCATTGTAACAGTG---------------------------------------------------------------GGGTGG---------GCCTATATC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSEN--S-GNAAS-Q-S-A-F-K-TL-RLIVTV---------------------GW---AYI--------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_DQ203763 [I-Firmicutes-a] SS114a0D6_env_samples_DQ203763 gi|77547974|gb|DQ203763| Uncultured bacterium clone SS114a0D6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0D6 predicted proteorhodopsin gene, partial cds DQ203763 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTACATTGATTGGCTGATAACCGTACCATTACAGATTGTTGAATTCTATTTAATACTAGCCGCTGTGACCGCAGTCCGAACCGGACTCTTTTGGCAGCTTCTCGGGGCGTCAGTTGTAATGCTCCTGGGCGGTTATCTCGGCGAAACGGCAGTGATCAGCCCAACAATTGGGTTCGTAGTGGGCATGGCCGGGTGGATTTATATTATCTACCTAATTTTTGCCGGAGAGGCTAATCAAGTCTCGGAAAATTCGGGAAATGCAGCAAGTCAGAGCGCTTTTAAAACGCTGCGACTCATTGTAACAGTGGGGTGGGCCATTTATCCA RYIDWLITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSENSGNAASQSAFKTLRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATTGATTGG------------------------CTGATAACCGTACCATTACAGATTGTTGAATTCTATTTAATACTAGCCGCT---------GTG---ACCGCAGTCCGAACC---GGACTC------------------------------------TTTTGGCAG---CTTCTCGGGGCGTCAGTTGTAATGCTCCTGGGCGGTTATCTCGGCGAA---------ACG------------------GCA------GTG---------------------------------ATC------------------------------------------------------------------AGCCCA------------------ACAATTGGG---TTCGTAGTGGGCATGGCCGGGTGGATTTATATTATCTACCTAATT---------------TTT------GCC---GGAGAGGCTAATCAAGTCTCGGAAAAT------TCG---GGAAATGCAGCAAGT---CAG---AGC---GCT---TTT---AAA---ACGCTG---CGACTCATTGTAACAGTG---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSEN--S-GNAAS-Q-S-A-F-K-TL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_DQ203760 [I-Firmicutes-a] SS114a0D10_env_samples_DQ203760 gi|77547968|gb|DQ203760| Uncultured bacterium clone SS114a0D10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0D10 predicted proteorhodopsin gene, partial cds DQ203760 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTGATAACCGTACCATTACAGATTGTTGAATTCTATTTAATACTAGCCGCTGTGACCGCAGTCCGCACCGGACTCTTTTGGCAGCTTCTAGGGGCGTCAGTTGTAATGCTCCTAGGCGGTTATCTCGGCGAAACGGCAGTGATCAGCCCAACAATTGGGTTCGTAGTGGGCATGGCCGGGTGGATTTATATTATCTACCTAATTTTTGCCGGAGAGGCTAATCAAGTCTCGGAAAATTCGGGAAATGCAGCAAGTCAGAGCGCTTTTAAAACGCTGCGACTCATTGTAACAGTGGGGTGGGCCATTTATCCA RYIDWLITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSENSGNAASQSAFKTLRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTGATAACCGTACCATTACAGATTGTTGAATTCTATTTAATACTAGCCGCT---------GTG---ACCGCAGTCCGCACC---GGACTC------------------------------------TTTTGGCAG---CTTCTAGGGGCGTCAGTTGTAATGCTCCTAGGCGGTTATCTCGGCGAA---------ACG------------------GCA------GTG---------------------------------ATC------------------------------------------------------------------AGCCCA------------------ACAATTGGG---TTCGTAGTGGGCATGGCCGGGTGGATTTATATTATCTACCTAATT---------------TTT------GCC---GGAGAGGCTAATCAAGTCTCGGAAAAT------TCG---GGAAATGCAGCAAGT---CAG---AGC---GCT---TTT---AAA---ACGCTG---CGACTCATTGTAACAGTG---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSEN--S-GNAAS-Q-S-A-F-K-TL-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_EU079213 [I-Firmicutes-a] NASB_75_env_samples_EU079213 gi|156106586|gb|EU079213| Uncultured organism clone NASB 75 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 75 putative proteorhodopsin gene, partial cds EU079213 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGTTATGTAGACTGGCTGATAACCGTACCATTACAAATTGTTGAATTCTATCTGATACTTGCCGCTGTGACTGCAGTCCGAACAGGACTCTTTTGGCAGCTTCTCGGGGCATCAGTTGTAATGCTCCTAGGGGGATATCTAGGCGAAACGGCAGTTATCAGTCCAACAATTGGGTTCGTAGTGGGCATGGCAGGGTGGATTTATATCATATACCTCATCTTTGCCGGAGAGGCTAACCAAGTCTCGGAAAGTTCGGGAAATGCAGCAAGTCAGAGCGCGTTTAAAACGCTGCGACTTATTGTAACAGTGGATGGGCCATCTACG RYVDWLITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSESSGNAASQSAFKTLRLIVTVDGPST ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTATGTAGACTGG------------------------CTGATAACCGTACCATTACAAATTGTTGAATTCTATCTGATACTTGCCGCT---------GTG---ACTGCAGTCCGAACA---GGACTC------------------------------------TTTTGGCAG---CTTCTCGGGGCATCAGTTGTAATGCTCCTAGGGGGATATCTAGGCGAA---------ACG------------------GCA------GTT---------------------------------ATC------------------------------------------------------------------AGTCCA------------------ACAATTGGG---TTCGTAGTGGGCATGGCAGGGTGGATTTATATCATATACCTCATC---------------TTT------GCC---GGAGAGGCTAACCAAGTCTCGGAAAGT------TCG---GGAAATGCAGCAAGT---CAG---AGC---GCG---TTT---AAA---ACGCTG---CGACTTATTGTAACAGTG------------------------------------------------------------GATGGGCCA---------TCTACG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSES--S-GNAAS-Q-S-A-F-K-TL-RLIVTV--------------------DGP---ST---------------------------------------------------------------------------------------------------- [I-Gamma2-a]_FJ862982 [I-Gamma2-a] clone_43_FJ862982 gi|226897364|gb|FJ862982| Uncultured bacterium clone 43 putative proteorhodopsin mRNA, partial cds. Uncultured bacterium clone 43 putative proteorhodopsin mRNA, partial cds. FJ862982 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 07-DEC-2009 #na coastal seawater Atlantic Ocean marine 38.8489 -75.1076 Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTTGATTGGCTTTTGACCGTGCCACTGTTGATGGTTGAGTTCTACTTAATTATGTCAGCGGTAGGTAAGGTACCAGGTCGTGTTTTCTGGAACCTATTAGGCGGTACCACTGTAATGCTGATCTTCGGATACATGGGTGAAACTGGCTCGATGGGTGTGGGCCTTGCGTTCGCTCTATCAATGGCAGCATGGCTATATGTAATCTGGTACATTATTAAAGGTGAAGCAAGTCAGGTTAATGCTAGCTTGGCAAACCCTAATGTTCAGAAAGCATACAAAACCATGACTATCCCTGTAACTTTTGGGTGGGCTATCTACGCTCGA VDWLLTVPLLMVEFYLIMSAVGKVPGRVFWNLLGGTTVMLIFGYMGETGSMGVGLAFALSMAAWLYVIWYIIKGEASQVNASLANPNVQKAYKTMTIPVTFGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGATTGG------------------------CTTTTGACCGTGCCACTGTTGATGGTTGAGTTCTACTTAATTATGTCAGCG---------GTA---GGTAAGGTACCAGGT---CGTGTT------------------------------------TTCTGGAAC---CTATTAGGCGGTACCACTGTAATGCTGATCTTCGGATACATGGGTGAA---------ACT------------------GGC------TCG---------------------------------ATG------------------------------------------------------------------GGTGTG------------------GGCCTTGCG---TTCGCTCTATCAATGGCAGCATGGCTATATGTAATCTGGTACATT---------------ATT------AAA---GGTGAAGCAAGTCAGGTTAATGCTAGC------TTG---GCAAACCCTAATGTT---CAG---AAA---GCA---TAC---AAA---ACCATG---ACTATCCCTGTAACTTTT---------------------------------------------------------------GGGTGG---------GCTATCTACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LLTVPLLMVEFYLIMSA---V-GKVPG-RV------------FWN-LLGGTTVMLIFGYMGE---T------G--S-----------M----------------------GV------GLA-FALSMAAWLYVIWYI-----I--K-GEASQVNAS--L-ANPNV-Q-K-A-Y-K-TM-TIPVTF---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [I-Gamma2-a]_FJ618955 [I-Gamma2-a] PR_108_08_11_env_samples_FJ618955 gi|223046793|gb|FJ618955| Uncultured bacterium clone PR 108 08 11 proteorhodopsin gene, partial cds Uncultured bacterium clone PR 108 08 11 proteorhodopsin gene, partial cds FJ618955 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-juil-09 #na Arctic_Ocean Arctic Ocean marine 71.37 -156.68 Photoheterotrophic microbes in the Arctic Ocean in summer and winter Cottrell,M.T. and Kirchman,D.L. Appl. Environ. Microbiol. 75 (15), 49584966 (2009) 19502441 #na TATGTTGACTGGTTACTCACTGTGCCGTTATTGATGGCTGAGTTCTATCTGATTATGTCTGCCGTAGGCAAGGTACCAGGACGAGTGTTCTGGAATCTATTAGGTGGTTCTACTGCTATGTTGCTATTCGGCTATGCTGGTGAGACTGGCATGATGAGTCCACTTATGGGCTTCGTTCTGTCCATGGCAGCTTGGTTCTATGTAATCTGGTACATCATTAAAGGCGAAGCCAGCAAAGTTAATGCTAGCTTGGCAAACCCAAATGTACAGAAAGCTTATAAGACAATGACCTTGTTGGTTACTGTTGGGTGGGCCATTTAT YVDWLLTVPLLMAEFYLIMSAVGKVPGRVFWNLLGGSTAMLLFGYAGETGMMSPLMGFVLSMAAWFYVIWYIIKGEASKVNASLANPNVQKAYKTMTLLVTVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTTGACTGG------------------------TTACTCACTGTGCCGTTATTGATGGCTGAGTTCTATCTGATTATGTCTGCC---------GTA---GGCAAGGTACCAGGA---CGAGTG------------------------------------TTCTGGAAT---CTATTAGGTGGTTCTACTGCTATGTTGCTATTCGGCTATGCTGGTGAG---------ACT------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------AGTCCA------------------CTTATGGGC---TTCGTTCTGTCCATGGCAGCTTGGTTCTATGTAATCTGGTACATC---------------ATT------AAA---GGCGAAGCCAGCAAAGTTAATGCTAGC------TTG---GCAAACCCAAATGTA---CAG---AAA---GCT---TAT---AAG---ACAATG---ACCTTGTTGGTTACTGTT---------------------------------------------------------------GGGTGG---------GCCATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLMAEFYLIMSA---V-GKVPG-RV------------FWN-LLGGSTAMLLFGYAGE---T------G--M-----------M----------------------SP------LMG-FVLSMAAWFYVIWYI-----I--K-GEASKVNAS--L-ANPNV-Q-K-A-Y-K-TM-TLLVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [I-Gamma2-a]_FJ618974 [I-Gamma2-a] PR_707_07_09_env_samples_FJ618974 gi|223046831|gb|FJ618974| Uncultured bacterium clone PR 707 07 09 proteorhodopsin gene, partial cds Uncultured bacterium clone PR 707 07 09 proteorhodopsin gene, partial cds FJ618974 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-juil-09 #na Arctic_Ocean Arctic Ocean marine 71.37 -156.68 Photoheterotrophic microbes in the Arctic Ocean in summer and winter Cottrell,M.T. and Kirchman,D.L. Appl. Environ. Microbiol. 75 (15), 49584966 (2009) 19502441 #na TATGTTGACTGGTTACTCACTGTGCCGTTATTGATGGCTGAGTTCTATCTGATTATGTCTGCCGTAGGCAAGGTACCAGGACGAGTGTTCTGGAATCTATTAGGTGGTTCTACTGCTATGTTGCTATTCGGCTATGCTGGTGAGACTGGCATGATGAGTCCACTTATGGGCTTCGTTCTGTCCATGGCAGCTTGGTTCTATGTAATCTGGTACATCATTAAAGGCGAAGCCAGCAAAGTTAATGCTAGCTTGGCAAACCCAAATGTACAGAAAGCTTATAAGACAATGACCTTGTTGGTTACTGTTGGGTGGGCTATTTAT YVDWLLTVPLLMAEFYLIMSAVGKVPGRVFWNLLGGSTAMLLFGYAGETGMMSPLMGFVLSMAAWFYVIWYIIKGEASKVNASLANPNVQKAYKTMTLLVTVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTTGACTGG------------------------TTACTCACTGTGCCGTTATTGATGGCTGAGTTCTATCTGATTATGTCTGCC---------GTA---GGCAAGGTACCAGGA---CGAGTG------------------------------------TTCTGGAAT---CTATTAGGTGGTTCTACTGCTATGTTGCTATTCGGCTATGCTGGTGAG---------ACT------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------AGTCCA------------------CTTATGGGC---TTCGTTCTGTCCATGGCAGCTTGGTTCTATGTAATCTGGTACATC---------------ATT------AAA---GGCGAAGCCAGCAAAGTTAATGCTAGC------TTG---GCAAACCCAAATGTA---CAG---AAA---GCT---TAT---AAG---ACAATG---ACCTTGTTGGTTACTGTT---------------------------------------------------------------GGGTGG---------GCTATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLMAEFYLIMSA---V-GKVPG-RV------------FWN-LLGGSTAMLLFGYAGE---T------G--M-----------M----------------------SP------LMG-FVLSMAAWFYVIWYI-----I--K-GEASKVNAS--L-ANPNV-Q-K-A-Y-K-TM-TLLVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [I-Gamma2-a]_FJ618981 [I-Gamma2-a] PR_707_07_17_env_samples_FJ618981 gi|223046845|gb|FJ618981| Uncultured bacterium clone PR 707 07 17 proteorhodopsin gene, partial cds Uncultured bacterium clone PR 707 07 17 proteorhodopsin gene, partial cds FJ618981 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-juil-09 #na Arctic_Ocean Arctic Ocean marine 71.37 -156.68 Photoheterotrophic microbes in the Arctic Ocean in summer and winter Cottrell,M.T. and Kirchman,D.L. Appl. Environ. Microbiol. 75 (15), 49584966 (2009) 19502441 #na TACGTCGACTGGTTACTCACTGTGCCGTTATTGATGGCTGAGTTCTATCTGATTATGTCTGCCGTAGGCAAGGTACCAGGACGAGTGTTCCGGAATCTATTAGGTGGTTCTACTGCTATGTTGCTATTCGGCTATGCTGGTGAGACTGGCATGATGAGTCCACTTATGGGCTTCGTTCTGTCCATGGCAGCTTGGTTCTATGTAATCTGGTACATCATTAAAGGCGAAGCCAGCAAAGTTAATGCTAGCTTGGCAAACCCAAATGTACAGAAAGCTTATAAGACAATGACCTTGTTGGTTACTGTTGGATGGGCGATATAT YVDWLLTVPLLMAEFYLIMSAVGKVPGRVFRNLLGGSTAMLLFGYAGETGMMSPLMGFVLSMAAWFYVIWYIIKGEASKVNASLANPNVQKAYKTMTLLVTVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACGTCGACTGG------------------------TTACTCACTGTGCCGTTATTGATGGCTGAGTTCTATCTGATTATGTCTGCC---------GTA---GGCAAGGTACCAGGA---CGAGTG------------------------------------TTCCGGAAT---CTATTAGGTGGTTCTACTGCTATGTTGCTATTCGGCTATGCTGGTGAG---------ACT------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------AGTCCA------------------CTTATGGGC---TTCGTTCTGTCCATGGCAGCTTGGTTCTATGTAATCTGGTACATC---------------ATT------AAA---GGCGAAGCCAGCAAAGTTAATGCTAGC------TTG---GCAAACCCAAATGTA---CAG---AAA---GCT---TAT---AAG---ACAATG---ACCTTGTTGGTTACTGTT---------------------------------------------------------------GGATGG---------GCGATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLMAEFYLIMSA---V-GKVPG-RV------------FRN-LLGGSTAMLLFGYAGE---T------G--M-----------M----------------------SP------LMG-FVLSMAAWFYVIWYI-----I--K-GEASKVNAS--L-ANPNV-Q-K-A-Y-K-TM-TLLVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [I-Gamma2-a]_FJ618979 [I-Gamma2-a] PR_707_07_15_env_samples_FJ618979 gi|223046841|gb|FJ618979| Uncultured bacterium clone PR 707 07 15 proteorhodopsin gene, partial cds Uncultured bacterium clone PR 707 07 15 proteorhodopsin gene, partial cds FJ618979 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-juil-09 #na Arctic_Ocean Arctic Ocean marine 71.37 -156.68 Photoheterotrophic microbes in the Arctic Ocean in summer and winter Cottrell,M.T. and Kirchman,D.L. Appl. Environ. Microbiol. 75 (15), 49584966 (2009) 19502441 #na TATATTGATTGGTTACTCACTGTGCCGTTATTGATGGCTGAGTTCTATCTGATTATGTCTGCCGTAGGCAAGGTACCAGGACGAGTGTTCTGGAATCTATTAGGTGGTTCTACTGCTATGTTGCTATTCGGCTATGCTGGTGAGACTGGCATGATGAGTCCACTTATGGGCTTCGTTCTGTCCATGGCAGCTTGGTTCTATGTAATCTGGTACATCATTAAAGGCGAAGCCAGCAAAGTTAATGCTAGCTTGGCAAACCCAAATGTACAGAAAGCTTATAAGACAATGACCTTGTTGGTTACTGTTGGATGGGCAATTTAC YIDWLLTVPLLMAEFYLIMSAVGKVPGRVFWNLLGGSTAMLLFGYAGETGMMSPLMGFVLSMAAWFYVIWYIIKGEASKVNASLANPNVQKAYKTMTLLVTVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATTGATTGG------------------------TTACTCACTGTGCCGTTATTGATGGCTGAGTTCTATCTGATTATGTCTGCC---------GTA---GGCAAGGTACCAGGA---CGAGTG------------------------------------TTCTGGAAT---CTATTAGGTGGTTCTACTGCTATGTTGCTATTCGGCTATGCTGGTGAG---------ACT------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------AGTCCA------------------CTTATGGGC---TTCGTTCTGTCCATGGCAGCTTGGTTCTATGTAATCTGGTACATC---------------ATT------AAA---GGCGAAGCCAGCAAAGTTAATGCTAGC------TTG---GCAAACCCAAATGTA---CAG---AAA---GCT---TAT---AAG---ACAATG---ACCTTGTTGGTTACTGTT---------------------------------------------------------------GGATGG---------GCAATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YIDW--------LLTVPLLMAEFYLIMSA---V-GKVPG-RV------------FWN-LLGGSTAMLLFGYAGE---T------G--M-----------M----------------------SP------LMG-FVLSMAAWFYVIWYI-----I--K-GEASKVNAS--L-ANPNV-Q-K-A-Y-K-TM-TLLVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [I-Gamma2-a]_EF088586 [I-Gamma2-a] E400001_env_samples_EF088586 gi|126843413|gb|EF088586| Uncultured bacterium clone E400001 putative proteorhodopsin gene, partial cds Uncultured bacterium clone E400001 putative proteorhodopsin gene, partial cds EF088586 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na Bering_Sea_surface_water_sample Arctic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTCGCCGCTACTGTCTTCTTCTTCCTTGAGCGTGATCGTGTTGCGGGCAAGTGGAAGACTTCTCTGACAGTTTCTGGTTTGGTTACACTTATCGCGGCAGTTCACTACTTTTACATGCGCGATGTTTGGGTTGCTACTGGAACTTCACCAACGGAATTCCGTTATATCGACTGGTTACTCACTGTGCCATTATTGATGGCTGAGTTCTATCTGATTATGTCTGCCGTAGGCAAGGTACCAGGACGAGTGTTCTGGAATCTATTAGGTGGTTCTACTGCTATGTTGCTATTCGGCTATGCTGGTGAGACTGGCATGATGAGTCCACTTATGGGCTTCGTTCTGTCCATGGCAGCTTGGTTCTATGTAATCTGGTACATCATTAAAGGCGAAGCCAGCAAAGTTAATGCTAGCTTGGCAAACCCAAATGTACAGAAAGCTTATAAGACAATGACCTTGTTGGTTACTGTTGGTTGGGCAATATATCCA MVAATVFFFLERDRVAGKWKTSLTVSGLVTLIAAVHYFYMRDVWVATGTSPTEFRYIDWLLTVPLLMAEFYLIMSAVGKVPGRVFWNLLGGSTAMLLFGYAGETGMMSPLMGFVLSMAAWFYVIWYIIKGEASKVNASLANPNVQKAYKTMTLLVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCCGCTACTGTCTTCTTCTTCCTTGAGCGTGATCGTGTTGCGGGC---AAGTGGAAGACTTCTCTGACAGTTTCTGGTTTGGTTACACTTATCGCGGCAGTTCACTACTTTTACATGCGCGATGTTTGGGTT---------------------------------------------------GCTACTGGAACTTCACCAACGGAATTCCGTTATATCGACTGG------------------------TTACTCACTGTGCCATTATTGATGGCTGAGTTCTATCTGATTATGTCTGCC---------GTA---GGCAAGGTACCAGGA---CGAGTG------------------------------------TTCTGGAAT---CTATTAGGTGGTTCTACTGCTATGTTGCTATTCGGCTATGCTGGTGAG---------ACT------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------AGTCCA------------------CTTATGGGC---TTCGTTCTGTCCATGGCAGCTTGGTTCTATGTAATCTGGTACATC---------------ATT------AAA---GGCGAAGCCAGCAAAGTTAATGCTAGC------TTG---GCAAACCCAAATGTA---CAG---AAA---GCT---TAT---AAG---ACAATG---ACCTTGTTGGTTACTGTT---------------------------------------------------------------GGTTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAG-KWKTSLTVSGLVTLIAAVHYFYMRDVWV-----------------ATGTSPTEFRYIDW--------LLTVPLLMAEFYLIMSA---V-GKVPG-RV------------FWN-LLGGSTAMLLFGYAGE---T------G--M-----------M----------------------SP------LMG-FVLSMAAWFYVIWYI-----I--K-GEASKVNAS--L-ANPNV-Q-K-A-Y-K-TM-TLLVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Gamma2-a]_EF088603 [I-Gamma2-a] E400025_env_samples_EF088603 gi|126843447|gb|EF088603| Uncultured bacterium clone E400025 putative proteorhodopsin gene, partial cds Uncultured bacterium clone E400025 putative proteorhodopsin gene, partial cds EF088603 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na Bering_Sea_surface_water_sample Arctic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTGGCCGCTACTGTTTTCTTCTTCCTTGAGCGTGATCGTGTTGCGGGCAAGTGGAAGACTTCTCTGACAGTTTCTGGTTTGGTTACACTTATCGCGGCAGTTCACTACTTTTACATGCGCGATGTTTGGGTTGCTACTGGAACTTCACCAACGGAATTCCGTTATATCGACTGGTTACTCACTGTGCCGTTATTGATGGCTGAGTTCTATCTGATTATGTCTGCCGTAGGCAAGGTACCAGGACGAGTGTTCTGGAATCTATTAGGTGGTTCTACTGCTATGTTGCTATTCGGCTATGCTGGTGAGACTGGCATGATGAGTCCACTTATGGGCTTCGTTCTGTCCATGGCAGCTTGGTTCTATGTAATCTGGTACATCATTAAAGGCGAAGCCAGCAAAGTTAATGCTAGCTTGGCAAACCCAAATGTACAGAAAGCTTATAAGACAATGACCTTGTTGGTTACTGTTGGTTGGGCTATCTAC MVAATVFFFLERDRVAGKWKTSLTVSGLVTLIAAVHYFYMRDVWVATGTSPTEFRYIDWLLTVPLLMAEFYLIMSAVGKVPGRVFWNLLGGSTAMLLFGYAGETGMMSPLMGFVLSMAAWFYVIWYIIKGEASKVNASLANPNVQKAYKTMTLLVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTTTTCTTCTTCCTTGAGCGTGATCGTGTTGCGGGC---AAGTGGAAGACTTCTCTGACAGTTTCTGGTTTGGTTACACTTATCGCGGCAGTTCACTACTTTTACATGCGCGATGTTTGGGTT---------------------------------------------------GCTACTGGAACTTCACCAACGGAATTCCGTTATATCGACTGG------------------------TTACTCACTGTGCCGTTATTGATGGCTGAGTTCTATCTGATTATGTCTGCC---------GTA---GGCAAGGTACCAGGA---CGAGTG------------------------------------TTCTGGAAT---CTATTAGGTGGTTCTACTGCTATGTTGCTATTCGGCTATGCTGGTGAG---------ACT------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------AGTCCA------------------CTTATGGGC---TTCGTTCTGTCCATGGCAGCTTGGTTCTATGTAATCTGGTACATC---------------ATT------AAA---GGCGAAGCCAGCAAAGTTAATGCTAGC------TTG---GCAAACCCAAATGTA---CAG---AAA---GCT---TAT---AAG---ACAATG---ACCTTGTTGGTTACTGTT---------------------------------------------------------------GGTTGG---------GCTATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFLERDRVAG-KWKTSLTVSGLVTLIAAVHYFYMRDVWV-----------------ATGTSPTEFRYIDW--------LLTVPLLMAEFYLIMSA---V-GKVPG-RV------------FWN-LLGGSTAMLLFGYAGE---T------G--M-----------M----------------------SP------LMG-FVLSMAAWFYVIWYI-----I--K-GEASKVNAS--L-ANPNV-Q-K-A-Y-K-TM-TLLVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [I-Gamma2-a]_JX863244 [I-Gamma2-a] MALINA_OTU07_310_L_env_samples_JX863244 gi|425477438|gb|JX863244| Uncultured bacterium clone MALINA OTU07 310 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU07 310 L putative proteorhodopsin mRNA, partial cds JX863244 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 02Aug2009 40m_depth Arctic Ocean marine 69.61 -138.23 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTACTCACTGTGCCGTTATTGATGGCTGAGTTCTATCTGATTATGTCTGCCGTAGGCAAGGTACCAGGACGAGTGTACTGGAATCTATTAGGTGGTTCTACTGCTATGTTGCTATTCGGCTATGCTGGTGAGACTGGCATGATGAGTCCACTTATGGGCTTCGTTCTGTCCATGGCAGCTTGGTTCTATGTAATCTGGTACATCATTAAAGGCGAAGCCAGCAAAGTTAATGCTAGCTTGGCAAACCCAAATGTACAGAAAGCTTATAAGACAATGACCTTGTTGGTTACTGTT WLLTVPLLMAEFYLIMSAVGKVPGRVYWNLLGGSTAMLLFGYAGETGMMSPLMGFVLSMAAWFYVIWYIIKGEASKVNASLANPNVQKAYKTMTLLVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTACTCACTGTGCCGTTATTGATGGCTGAGTTCTATCTGATTATGTCTGCC---------GTA---GGCAAGGTACCAGGA---CGAGTG------------------------------------TACTGGAAT---CTATTAGGTGGTTCTACTGCTATGTTGCTATTCGGCTATGCTGGTGAG---------ACT------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------AGTCCA------------------CTTATGGGC---TTCGTTCTGTCCATGGCAGCTTGGTTCTATGTAATCTGGTACATC---------------ATT------AAA---GGCGAAGCCAGCAAAGTTAATGCTAGC------TTG---GCAAACCCAAATGTA---CAG---AAA---GCT---TAT---AAG---ACAATG---ACCTTGTTGGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLMAEFYLIMSA---V-GKVPG-RV------------YWN-LLGGSTAMLLFGYAGE---T------G--M-----------M----------------------SP------LMG-FVLSMAAWFYVIWYI-----I--K-GEASKVNAS--L-ANPNV-Q-K-A-Y-K-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_JX863242 [I-Gamma2-a] MALINA_OTU07_293_L_env_samples_JX863242 gi|425477434|gb|JX863242| Uncultured bacterium clone MALINA OTU07 293 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU07 293 L putative proteorhodopsin mRNA, partial cds JX863242 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 02Aug2009 40m_depth Arctic Ocean marine 69.61 -138.23 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTACTCACTGTGCCGTTATTGATGGCTGAGTTCTATCTGATTATGTCTGCCGTAGGCAAGGTACCAGGACGAGTGTTCTGGAATCTATTAGGTGGTTCTACTGCTATGTTGCTATTCGGCTATGCTGGTGAGACTGGCATGATGAGTCCACTTATGGGCTTCGTTCTGTCCATGGCAGCTTGGTTCTATGTAATCTGGTACATCATTAAAGGCGAAGCCAGCAAAGTTAATGCTAGCTTGGCAAACCCAAATGTACAGAAAGCTTATAAGACAATGACCTTGTTGGTTACTGTT WLLTVPLLMAEFYLIMSAVGKVPGRVFWNLLGGSTAMLLFGYAGETGMMSPLMGFVLSMAAWFYVIWYIIKGEASKVNASLANPNVQKAYKTMTLLVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTACTCACTGTGCCGTTATTGATGGCTGAGTTCTATCTGATTATGTCTGCC---------GTA---GGCAAGGTACCAGGA---CGAGTG------------------------------------TTCTGGAAT---CTATTAGGTGGTTCTACTGCTATGTTGCTATTCGGCTATGCTGGTGAG---------ACT------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------AGTCCA------------------CTTATGGGC---TTCGTTCTGTCCATGGCAGCTTGGTTCTATGTAATCTGGTACATC---------------ATT------AAA---GGCGAAGCCAGCAAAGTTAATGCTAGC------TTG---GCAAACCCAAATGTA---CAG---AAA---GCT---TAT---AAG---ACAATG---ACCTTGTTGGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLMAEFYLIMSA---V-GKVPG-RV------------FWN-LLGGSTAMLLFGYAGE---T------G--M-----------M----------------------SP------LMG-FVLSMAAWFYVIWYI-----I--K-GEASKVNAS--L-ANPNV-Q-K-A-Y-K-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_JX863246 [I-Gamma2-a] MALINA_OTU07_355_L_env_samples_JX863246 gi|425477442|gb|JX863246| Uncultured bacterium clone MALINA OTU07 355 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU07 355 L putative proteorhodopsin mRNA, partial cds JX863246 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 02Aug2009 3m_depth Arctic Ocean marine 69.61 -138.23 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTACTCACTGTGCCGTTATTGATGGCTGAGTTCTATCTGATTATGTCTGCCGTAAGCAAGGTACCAGGACGAGTGTTCTGGAATCTATTAGGTGGTTCTACTGCTATGTTGCTATTCGGCTATGCTGGTGAGACTGGCATGATGAGTCCACTTATGGGCTTCGTTCTGTCCATGGCAGCTTGGTTCTATGTAATCTGGTACATCATTAAAGGCGAAGCCAGCAAAGTTAATGCTAGCTTGGCAAACCCAAATGTACGGAAAGCTTATAAGACAATGACCTTGTTGGTTACTGTT WLLTVPLLMAEFYLIMSAVSKVPGRVFWNLLGGSTAMLLFGYAGETGMMSPLMGFVLSMAAWFYVIWYIIKGEASKVNASLANPNVRKAYKTMTLLVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTACTCACTGTGCCGTTATTGATGGCTGAGTTCTATCTGATTATGTCTGCC---------GTA---AGCAAGGTACCAGGA---CGAGTG------------------------------------TTCTGGAAT---CTATTAGGTGGTTCTACTGCTATGTTGCTATTCGGCTATGCTGGTGAG---------ACT------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------AGTCCA------------------CTTATGGGC---TTCGTTCTGTCCATGGCAGCTTGGTTCTATGTAATCTGGTACATC---------------ATT------AAA---GGCGAAGCCAGCAAAGTTAATGCTAGC------TTG---GCAAACCCAAATGTA---CGG---AAA---GCT---TAT---AAG---ACAATG---ACCTTGTTGGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLMAEFYLIMSA---V-SKVPG-RV------------FWN-LLGGSTAMLLFGYAGE---T------G--M-----------M----------------------SP------LMG-FVLSMAAWFYVIWYI-----I--K-GEASKVNAS--L-ANPNV-R-K-A-Y-K-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_JX863247 [I-Gamma2-a] MALINA_OTU07_368_L_env_samples_JX863247 gi|425477444|gb|JX863247| Uncultured bacterium clone MALINA OTU07 368 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU07 368 L putative proteorhodopsin mRNA, partial cds JX863247 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 02Aug2009 3m_depth Arctic Ocean marine 69.61 -138.23 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTACTCACTGTGCCGTTATTGATGGCTGAGTTCTATCTGATTATGTCTGCCGTAGGCAAGGTACCAGGACGAGTGTTCTGGAATCTATTAGGTGGTTCTACTGCTATGTTGCTATTCGGCTATGCTGGTGAGACTGGCATGATGAGTCCACTTATGGGCTTCGTTCTGTCCACGGCAGCTTGGTTCTATGTAATCTGGTACATCATTAAAGGCGAAGCCAGCAAAGTTAATGCTAGCTTGGCAAACCCAAATGTACAGAAAGCTTATAAGACAATGACCTTGTTGGTTACTGTT WLLTVPLLMAEFYLIMSAVGKVPGRVFWNLLGGSTAMLLFGYAGETGMMSPLMGFVLSTAAWFYVIWYIIKGEASKVNASLANPNVQKAYKTMTLLVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTACTCACTGTGCCGTTATTGATGGCTGAGTTCTATCTGATTATGTCTGCC---------GTA---GGCAAGGTACCAGGA---CGAGTG------------------------------------TTCTGGAAT---CTATTAGGTGGTTCTACTGCTATGTTGCTATTCGGCTATGCTGGTGAG---------ACT------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------AGTCCA------------------CTTATGGGC---TTCGTTCTGTCCACGGCAGCTTGGTTCTATGTAATCTGGTACATC---------------ATT------AAA---GGCGAAGCCAGCAAAGTTAATGCTAGC------TTG---GCAAACCCAAATGTA---CAG---AAA---GCT---TAT---AAG---ACAATG---ACCTTGTTGGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLMAEFYLIMSA---V-GKVPG-RV------------FWN-LLGGSTAMLLFGYAGE---T------G--M-----------M----------------------SP------LMG-FVLSTAAWFYVIWYI-----I--K-GEASKVNAS--L-ANPNV-Q-K-A-Y-K-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_JX863243 [I-Gamma2-a] MALINA_OTU07_307_L_env_samples_JX863243 gi|425477436|gb|JX863243| Uncultured bacterium clone MALINA OTU07 307 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU07 307 L putative proteorhodopsin mRNA, partial cds JX863243 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 02Aug2009 40m_depth Arctic Ocean marine 69.61 -138.23 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTACTCACTGTGCCGTTATTGATGGCTGAGTTCTATCTGATTATGTCTGCCGTAGGCAAGGTACCAGGACAAGTGTTCTGGAATCTATTAGGTGGTTCTACTGCTATGTTGCTATTCGGCTATGCTGGTGAGACTGGCATGATGAGTCCACTTATGGGCTTCGTTCTGTCCATGGCAGCTTGGTTCTATGTAATCTGGTACATCATTAAAGGCGAAGCCAGCAGAGTTAATGCTAGCTTGGCAAACCCAAATGTACAGAAAGCTTATAAGACAATGACCTTGTTGGTTACTGTT WLLTVPLLMAEFYLIMSAVGKVPGQVFWNLLGGSTAMLLFGYAGETGMMSPLMGFVLSMAAWFYVIWYIIKGEASRVNASLANPNVQKAYKTMTLLVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTACTCACTGTGCCGTTATTGATGGCTGAGTTCTATCTGATTATGTCTGCC---------GTA---GGCAAGGTACCAGGA---CAAGTG------------------------------------TTCTGGAAT---CTATTAGGTGGTTCTACTGCTATGTTGCTATTCGGCTATGCTGGTGAG---------ACT------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------AGTCCA------------------CTTATGGGC---TTCGTTCTGTCCATGGCAGCTTGGTTCTATGTAATCTGGTACATC---------------ATT------AAA---GGCGAAGCCAGCAGAGTTAATGCTAGC------TTG---GCAAACCCAAATGTA---CAG---AAA---GCT---TAT---AAG---ACAATG---ACCTTGTTGGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLMAEFYLIMSA---V-GKVPG-QV------------FWN-LLGGSTAMLLFGYAGE---T------G--M-----------M----------------------SP------LMG-FVLSMAAWFYVIWYI-----I--K-GEASRVNAS--L-ANPNV-Q-K-A-Y-K-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_JX863148 [I-Gamma2-a] MALINA_OTU07_477_L_env_samples_JX863148 gi|425477246|gb|JX863148| Uncultured bacterium clone MALINA OTU07 477 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU07 477 L putative proteorhodopsin gene, partial cds JX863148 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 13Aug2009 0m_depth Arctic Ocean marine 69.25 -137.2 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTACTCACTGTGCCGTTATTGATGGCTGAGTTCTATCTGATTATGTCTGCCGTAGGCAAGGTACCAGGACGAGTGTTCTGGAATCTATTAGGTGGTTCTACTGCTATGTTGCTATTCGGCTATGCTGGTGAGACTGGCATGATGAGTCCACTTATGGGCTTCGTTCTGTCCATGGCAGCTTGGTTCTATGTAATCTGGTACATCATTAAAGGCGTAGCCAGCAGAGTTAATGCTAGCTTGGCAAACCCAAATGTACAGAAAGCTTATAAGACAATGACCTTGTTGGTTACTGTT WLLTVPLLMAEFYLIMSAVGKVPGRVFWNLLGGSTAMLLFGYAGETGMMSPLMGFVLSMAAWFYVIWYIIKGVASRVNASLANPNVQKAYKTMTLLVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTACTCACTGTGCCGTTATTGATGGCTGAGTTCTATCTGATTATGTCTGCC---------GTA---GGCAAGGTACCAGGA---CGAGTG------------------------------------TTCTGGAAT---CTATTAGGTGGTTCTACTGCTATGTTGCTATTCGGCTATGCTGGTGAG---------ACT------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------AGTCCA------------------CTTATGGGC---TTCGTTCTGTCCATGGCAGCTTGGTTCTATGTAATCTGGTACATC---------------ATT------AAA---GGCGTAGCCAGCAGAGTTAATGCTAGC------TTG---GCAAACCCAAATGTA---CAG---AAA---GCT---TAT---AAG---ACAATG---ACCTTGTTGGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLMAEFYLIMSA---V-GKVPG-RV------------FWN-LLGGSTAMLLFGYAGE---T------G--M-----------M----------------------SP------LMG-FVLSMAAWFYVIWYI-----I--K-GVASRVNAS--L-ANPNV-Q-K-A-Y-K-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_JX863245 [I-Gamma2-a] MALINA_OTU07_316_L_env_samples_JX863245 gi|425477440|gb|JX863245| Uncultured bacterium clone MALINA OTU07 316 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU07 316 L putative proteorhodopsin mRNA, partial cds JX863245 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 02Aug2009 40m_depth Arctic Ocean marine 69.61 -138.23 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTACTCACTGTGCCGTTATTGATGGCTGAGTTCTATCTGATTATGTCTGCCGTAGGCAAGGTACCAGGACGAGTGTTCTGGAATCTATTAGGTGGTTCTACTGCTATGTTGCTATTCGGCTATGCTGGTGAGACTGGCATGATGAGTCCACTTATGGGCTTCGTTCTGTCCATGGCAGCTTGGTTCTATGTAATTTGGCACATCATTAAAGGCGAAGCCAGCAAAGTTAATGCTAGCTTGGCAAACCCAAATGTACAGAAAGCTTATAAGACAATGACCTTGTTGGTTACTGTT WLLTVPLLMAEFYLIMSAVGKVPGRVFWNLLGGSTAMLLFGYAGETGMMSPLMGFVLSMAAWFYVIWHIIKGEASKVNASLANPNVQKAYKTMTLLVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTACTCACTGTGCCGTTATTGATGGCTGAGTTCTATCTGATTATGTCTGCC---------GTA---GGCAAGGTACCAGGA---CGAGTG------------------------------------TTCTGGAAT---CTATTAGGTGGTTCTACTGCTATGTTGCTATTCGGCTATGCTGGTGAG---------ACT------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------AGTCCA------------------CTTATGGGC---TTCGTTCTGTCCATGGCAGCTTGGTTCTATGTAATTTGGCACATC---------------ATT------AAA---GGCGAAGCCAGCAAAGTTAATGCTAGC------TTG---GCAAACCCAAATGTA---CAG---AAA---GCT---TAT---AAG---ACAATG---ACCTTGTTGGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLMAEFYLIMSA---V-GKVPG-RV------------FWN-LLGGSTAMLLFGYAGE---T------G--M-----------M----------------------SP------LMG-FVLSMAAWFYVIWHI-----I--K-GEASKVNAS--L-ANPNV-Q-K-A-Y-K-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_JX863268 [I-Gamma2-a] MALINA_OTU17_294_L_env_samples_JX863268 gi|425477486|gb|JX863268| Uncultured bacterium clone MALINA OTU17 294 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU17 294 L putative proteorhodopsin mRNA, partial cds JX863268 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 02Aug2009 40m_depth Arctic Ocean marine 69.61 -138.23 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGTTAACTGTGCCGTTATTAATGGCAGAGTTTTACTTGATAATGTCAGCGGTAGGCAAAGTACCTGGACGTGTATTCTGGAATCTTTTAGCTGGCACTACAGCTATGCTTCTTTTAGGTTACGCTGGTGAAACTGGCATGATGAATGTAGGCCTCGCCTTTGGTTTATCAATGGCAGCTTGGCTCTACGTTATCTGGTACATTATGATGGGCGAAGCAAGCAAAATTAATGCAAACTTAGCAAATCCACATGTTCAAAAAGCTTACAAGACGATGACGTTATTGGTTACTGTT WLLTVPLLMAEFYLIMSAVGKVPGRVFWNLLAGTTAMLLLGYAGETGMMNVGLAFGLSMAAWLYVIWYIMMGEASKINANLANPHVQKAYKTMTLLVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGTTAACTGTGCCGTTATTAATGGCAGAGTTTTACTTGATAATGTCAGCG---------GTA---GGCAAAGTACCTGGA---CGTGTA------------------------------------TTCTGGAAT---CTTTTAGCTGGCACTACAGCTATGCTTCTTTTAGGTTACGCTGGTGAA---------ACT------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------AATGTA------------------GGCCTCGCC---TTTGGTTTATCAATGGCAGCTTGGCTCTACGTTATCTGGTACATT---------------ATG------ATG---GGCGAAGCAAGCAAAATTAATGCAAAC------TTA---GCAAATCCACATGTT---CAA---AAA---GCT---TAC---AAG---ACGATG---ACGTTATTGGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLMAEFYLIMSA---V-GKVPG-RV------------FWN-LLAGTTAMLLLGYAGE---T------G--M-----------M----------------------NV------GLA-FGLSMAAWLYVIWYI-----M--M-GEASKINAN--L-ANPHV-Q-K-A-Y-K-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-SAR92]_JX863170 [I-Gamma2-SAR92] MALINA_OTU11_180_L_env_samples_JX863170 gi|425477290|gb|JX863170| Uncultured bacterium clone MALINA OTU11 180 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU11 180 L putative proteorhodopsin gene, partial cds JX863170 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 11Aug2009 80m_depth Arctic Ocean marine 70.68 -139.62 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGCTAACTGCGCCGCTGCTAATGATTGAGTTCTATTTGATCTTAACCGCAGTTGCCAAAGTGCCTGGCGGAGTTTTCTGGCGCTTGTTGGTCGGCTCTGTTGTCGTGCTCGGCTTTGGATTTGCTGGTGAAACAGGCATGATGGACGTGCAGTTGGCATTCTGGCCAGCAATGGCGGCATGGGGCTTCATTATCTGGGAAATCTTCAAAGGTGAAGCAAGCCAGATCAATGCCGGTCTTTCTAACGACCATGTGCAGAAAGCTTATAGGACAATGACCCTTCTTGTGACTGTA WLLTAPLLMIEFYLILTAVAKVPGGVFWRLLVGSVVVLGFGFAGETGMMDVQLAFWPAMAAWGFIIWEIFKGEASQINAGLSNDHVQKAYRTMTLLVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGCTAACTGCGCCGCTGCTAATGATTGAGTTCTATTTGATCTTAACCGCA---------GTT---GCCAAAGTGCCTGGC---GGAGTT------------------------------------TTCTGGCGC---TTGTTGGTCGGCTCTGTTGTCGTGCTCGGCTTTGGATTTGCTGGTGAA---------ACA------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GACGTG------------------CAGTTGGCA---TTCTGGCCAGCAATGGCGGCATGGGGCTTCATTATCTGGGAAATC---------------TTC------AAA---GGTGAAGCAAGCCAGATCAATGCCGGT------CTT---TCTAACGACCATGTG---CAG---AAA---GCT---TAT---AGG---ACAATG---ACCCTTCTTGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTAPLLMIEFYLILTA---V-AKVPG-GV------------FWR-LLVGSVVVLGFGFAGE---T------G--M-----------M----------------------DV------QLA-FWPAMAAWGFIIWEI-----F--K-GEASQINAG--L-SNDHV-Q-K-A-Y-R-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-SAR92]_JX863260 [I-Gamma2-SAR92] MALINA_OTU11_226_L_env_samples_JX863260 gi|425477470|gb|JX863260| Uncultured bacterium clone MALINA OTU11 226 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU11 226 L putative proteorhodopsin mRNA, partial cds JX863260 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 11Aug2009 65m_depth Arctic Ocean marine 70.68 -139.62 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGCTAACTGTGCCGCTGCTAATGATTGAGTTCTATTTGATCTTAACCGCAGTTGCCAAAGTGCCTGGCGGAGTTTTCTGGCGCTTGTTGGTCGGCTCTGTTGTCATGCTCGGCTTTGGATTTGCTGGTGAAACAGGCATGATGGACGTGCAGTTGGCATTCTGGCCAGCAATGGCGGCATGGGGCTTCATTATCTGGGAAATCTTCAAAGGTGAAGCAAGCCAGATCAATGCCGGTCTTTCTAACGGCCATGTGCAGAAAGCTTATAGGACAATGACCCTTCTTGTGACTGTA WLLTVPLLMIEFYLILTAVAKVPGGVFWRLLVGSVVMLGFGFAGETGMMDVQLAFWPAMAAWGFIIWEIFKGEASQINAGLSNGHVQKAYRTMTLLVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGCTAACTGTGCCGCTGCTAATGATTGAGTTCTATTTGATCTTAACCGCA---------GTT---GCCAAAGTGCCTGGC---GGAGTT------------------------------------TTCTGGCGC---TTGTTGGTCGGCTCTGTTGTCATGCTCGGCTTTGGATTTGCTGGTGAA---------ACA------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GACGTG------------------CAGTTGGCA---TTCTGGCCAGCAATGGCGGCATGGGGCTTCATTATCTGGGAAATC---------------TTC------AAA---GGTGAAGCAAGCCAGATCAATGCCGGT------CTT---TCTAACGGCCATGTG---CAG---AAA---GCT---TAT---AGG---ACAATG---ACCCTTCTTGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLMIEFYLILTA---V-AKVPG-GV------------FWR-LLVGSVVMLGFGFAGE---T------G--M-----------M----------------------DV------QLA-FWPAMAAWGFIIWEI-----F--K-GEASQINAG--L-SNGHV-Q-K-A-Y-R-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-SAR92]_JX863257 [I-Gamma2-SAR92] MALINA_OTU11_201_L_env_samples_JX863257 gi|425477464|gb|JX863257| Uncultured bacterium clone MALINA OTU11 201 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU11 201 L putative proteorhodopsin mRNA, partial cds JX863257 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 11Aug2009 65m_depth Arctic Ocean marine 70.68 -139.62 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGCTAACTGTGCCGCTGCTAATGATCGAGTTCTATTTGATCTTAACCGCGGTTGCCAAAGTGCCTGGCGGAGTTTTCTGGCGCTTGTTGATCGGCTCTGTTGTCATGCTCGGCTTTGGATTTGCTGGTGAAACAGGCATGATGGACGTGCAGTTGGCATTCTGGCCAGCAATGGCGGCATGGGGCTTCATTATCTGGGAAATCTTCAAAGGTGAAGCAAGCCAGATCAATGCCGGTCTTTCTAACGATCATGTGCAGAAAGCTTATAGGACAATGACCCTTCTTGTGACTGTA WLLTVPLLMIEFYLILTAVAKVPGGVFWRLLIGSVVMLGFGFAGETGMMDVQLAFWPAMAAWGFIIWEIFKGEASQINAGLSNDHVQKAYRTMTLLVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGCTAACTGTGCCGCTGCTAATGATCGAGTTCTATTTGATCTTAACCGCG---------GTT---GCCAAAGTGCCTGGC---GGAGTT------------------------------------TTCTGGCGC---TTGTTGATCGGCTCTGTTGTCATGCTCGGCTTTGGATTTGCTGGTGAA---------ACA------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GACGTG------------------CAGTTGGCA---TTCTGGCCAGCAATGGCGGCATGGGGCTTCATTATCTGGGAAATC---------------TTC------AAA---GGTGAAGCAAGCCAGATCAATGCCGGT------CTT---TCTAACGATCATGTG---CAG---AAA---GCT---TAT---AGG---ACAATG---ACCCTTCTTGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLMIEFYLILTA---V-AKVPG-GV------------FWR-LLIGSVVMLGFGFAGE---T------G--M-----------M----------------------DV------QLA-FWPAMAAWGFIIWEI-----F--K-GEASQINAG--L-SNDHV-Q-K-A-Y-R-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-SAR92]_JX863165 [I-Gamma2-SAR92] MALINA_OTU11_067_L_env_samples_JX863165 gi|425477280|gb|JX863165| Uncultured bacterium clone MALINA OTU11 067 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU11 067 L putative proteorhodopsin gene, partial cds JX863165 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 08Aug2009 70m_depth Arctic Ocean marine 70.8 -133.73 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGCTAACTGTGCCGCTGCTAATGATTGAGTTCTATTTGATCTTAACCGCAGCTGCCAAAGTGCCTGGCGGAGTTTTCTGGCGCTTGTTGGTCGGCTCTGTTGTCATGCTCGGCTTTGGATTTGCTGGTGAAACAGGCATGATGGACGTGCAGTTGGCATTCTGGCCAGCAATGGCGGCATGGGGCTTCATTATCTGGGAAATCTTCAAAGGTGAAGCAAGCCAGATCAATGCCGGTCTTTCTAACGACCATGTGCAGAAAGCTTATAGGACAATGACCCTTCTTGTGACTGTA WLLTVPLLMIEFYLILTAAAKVPGGVFWRLLVGSVVMLGFGFAGETGMMDVQLAFWPAMAAWGFIIWEIFKGEASQINAGLSNDHVQKAYRTMTLLVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGCTAACTGTGCCGCTGCTAATGATTGAGTTCTATTTGATCTTAACCGCA---------GCT---GCCAAAGTGCCTGGC---GGAGTT------------------------------------TTCTGGCGC---TTGTTGGTCGGCTCTGTTGTCATGCTCGGCTTTGGATTTGCTGGTGAA---------ACA------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GACGTG------------------CAGTTGGCA---TTCTGGCCAGCAATGGCGGCATGGGGCTTCATTATCTGGGAAATC---------------TTC------AAA---GGTGAAGCAAGCCAGATCAATGCCGGT------CTT---TCTAACGACCATGTG---CAG---AAA---GCT---TAT---AGG---ACAATG---ACCCTTCTTGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLMIEFYLILTA---A-AKVPG-GV------------FWR-LLVGSVVMLGFGFAGE---T------G--M-----------M----------------------DV------QLA-FWPAMAAWGFIIWEI-----F--K-GEASQINAG--L-SNDHV-Q-K-A-Y-R-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-SAR92]_JX863259 [I-Gamma2-SAR92] MALINA_OTU11_211_L_env_samples_JX863259 gi|425477468|gb|JX863259| Uncultured bacterium clone MALINA OTU11 211 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU11 211 L putative proteorhodopsin mRNA, partial cds JX863259 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 11Aug2009 65m_depth Arctic Ocean marine 70.68 -139.62 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGCTAACTGTGCCGCTGCTAATGATTGAGTTCTATTTGATCTTAACCGCAGTTGCCAAAGTGCCTGGCGGAGTTTTCTGGCGCTTGTTGGTCGGCTCTGTTGTCATGCTCGGCTTTGGATTTGCTGGTGAAACAGGCATGATGGATGTGCAGTTGGCATTCTGGCCAGCAATGGCGGCATGGGGCTTCATTATCTGGGAAATCTTCAAAGGTGAAGCAAGCCAGATCAATGCCGGTCTTTCTAACGACCATGCGCAGAAAGCTTATAGGACAATGACCCTTCTTGTGACTGTA WLLTVPLLMIEFYLILTAVAKVPGGVFWRLLVGSVVMLGFGFAGETGMMDVQLAFWPAMAAWGFIIWEIFKGEASQINAGLSNDHAQKAYRTMTLLVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGCTAACTGTGCCGCTGCTAATGATTGAGTTCTATTTGATCTTAACCGCA---------GTT---GCCAAAGTGCCTGGC---GGAGTT------------------------------------TTCTGGCGC---TTGTTGGTCGGCTCTGTTGTCATGCTCGGCTTTGGATTTGCTGGTGAA---------ACA------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GATGTG------------------CAGTTGGCA---TTCTGGCCAGCAATGGCGGCATGGGGCTTCATTATCTGGGAAATC---------------TTC------AAA---GGTGAAGCAAGCCAGATCAATGCCGGT------CTT---TCTAACGACCATGCG---CAG---AAA---GCT---TAT---AGG---ACAATG---ACCCTTCTTGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLMIEFYLILTA---V-AKVPG-GV------------FWR-LLVGSVVMLGFGFAGE---T------G--M-----------M----------------------DV------QLA-FWPAMAAWGFIIWEI-----F--K-GEASQINAG--L-SNDHA-Q-K-A-Y-R-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-SAR92]_JX863261 [I-Gamma2-SAR92] MALINA_OTU11_233_L_env_samples_JX863261 gi|425477472|gb|JX863261| Uncultured bacterium clone MALINA OTU11 233 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU11 233 L putative proteorhodopsin mRNA, partial cds JX863261 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 11Aug2009 65m_depth Arctic Ocean marine 70.68 -139.62 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGCTAACTGTGCCGCTGCTAATGATTGAGTTCTATTTGATCTTAACCGCAGTTGCCAAAGTGCCTGGCGGAGTTTTCTGGCGCTTGTTGGTCGGCTCTGTTGTCATGCGCGGCTTTGGATTTGCTGGTGAAACAGGCATGATGGATGTGCAGTTGGCATTCCGGCCAGCAATGGCGGCATGGGGCTTCATTATCTGGGAAATCTTCAAAGGTGAAGCAAGCCAGATCAATGCCGGTCTTTCTAACGACCATGTGCAGAAAGCTTATAGGACAATGACCCTTCTTGTGACTGTA WLLTVPLLMIEFYLILTAVAKVPGGVFWRLLVGSVVMRGFGFAGETGMMDVQLAFRPAMAAWGFIIWEIFKGEASQINAGLSNDHVQKAYRTMTLLVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGCTAACTGTGCCGCTGCTAATGATTGAGTTCTATTTGATCTTAACCGCA---------GTT---GCCAAAGTGCCTGGC---GGAGTT------------------------------------TTCTGGCGC---TTGTTGGTCGGCTCTGTTGTCATGCGCGGCTTTGGATTTGCTGGTGAA---------ACA------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GATGTG------------------CAGTTGGCA---TTCCGGCCAGCAATGGCGGCATGGGGCTTCATTATCTGGGAAATC---------------TTC------AAA---GGTGAAGCAAGCCAGATCAATGCCGGT------CTT---TCTAACGACCATGTG---CAG---AAA---GCT---TAT---AGG---ACAATG---ACCCTTCTTGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLMIEFYLILTA---V-AKVPG-GV------------FWR-LLVGSVVMRGFGFAGE---T------G--M-----------M----------------------DV------QLA-FRPAMAAWGFIIWEI-----F--K-GEASQINAG--L-SNDHV-Q-K-A-Y-R-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-SAR92]_JX863255 [I-Gamma2-SAR92] MALINA_OTU11_155_L_env_samples_JX863255 gi|425477460|gb|JX863255| Uncultured bacterium clone MALINA OTU11 155 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU11 155 L putative proteorhodopsin mRNA, partial cds JX863255 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 08Aug2009 50m_depth Arctic Ocean marine 70.8 -133.73 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGCTAACTGTGCCGCTGCTAATGATTGAGTTCTATTTGACCTTAACCGCAGTTGCCAAAGTGCCTGGCGGAGTTTTCTGGCGCTTGTTGGTCGGCTCTGTTGTCATGCTCGGCTTTGGATTTGCTGGTGAAACAGGCATGATGGACGTGCAGTTGGCATTCTGGCCAGCAATGGCGGCATGGGGCTTCATTATCTGGGAAATCTTCAAAGGCGAAGCAAGCCAGATCAATGCCGGTCTTTCTAACGATCATGTGCAGAAAGCTTATAGGACAATGACCCTTCTTGTGACTGTA WLLTVPLLMIEFYLTLTAVAKVPGGVFWRLLVGSVVMLGFGFAGETGMMDVQLAFWPAMAAWGFIIWEIFKGEASQINAGLSNDHVQKAYRTMTLLVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGCTAACTGTGCCGCTGCTAATGATTGAGTTCTATTTGACCTTAACCGCA---------GTT---GCCAAAGTGCCTGGC---GGAGTT------------------------------------TTCTGGCGC---TTGTTGGTCGGCTCTGTTGTCATGCTCGGCTTTGGATTTGCTGGTGAA---------ACA------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GACGTG------------------CAGTTGGCA---TTCTGGCCAGCAATGGCGGCATGGGGCTTCATTATCTGGGAAATC---------------TTC------AAA---GGCGAAGCAAGCCAGATCAATGCCGGT------CTT---TCTAACGATCATGTG---CAG---AAA---GCT---TAT---AGG---ACAATG---ACCCTTCTTGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLMIEFYLTLTA---V-AKVPG-GV------------FWR-LLVGSVVMLGFGFAGE---T------G--M-----------M----------------------DV------QLA-FWPAMAAWGFIIWEI-----F--K-GEASQINAG--L-SNDHV-Q-K-A-Y-R-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-SAR92]_JX863256 [I-Gamma2-SAR92] MALINA_OTU11_160_L_env_samples_JX863256 gi|425477462|gb|JX863256| Uncultured bacterium clone MALINA OTU11 160 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU11 160 L putative proteorhodopsin mRNA, partial cds JX863256 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 08Aug2009 50m_depth Arctic Ocean marine 70.8 -133.73 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGCTAGCTGTGCCGCTGCTAATGATTGAGTTCTATTTGATCTTAACCGCAGTTGCCAAAGTGCCTGGCGGAGTCTTCTGGCGCTTGTTGGTCGGCTCTGTTGTCATGCTCGGCTTTGGATTTGCTGGTGAAACAGGCATGATGGACGTGCAGTTGGCATTCTGGCCAGCAATGGCGGCATGGGGCTTCATTATCTGGGAAATCTTCAAAGGTGAAGCAAGCCAGATCAATGCCGGTCTTTCTAACGATCATGTGCAGAAAGCTTATAGGACAATGACCCTTCTTGTGACTGTA WLLAVPLLMIEFYLILTAVAKVPGGVFWRLLVGSVVMLGFGFAGETGMMDVQLAFWPAMAAWGFIIWEIFKGEASQINAGLSNDHVQKAYRTMTLLVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGCTAGCTGTGCCGCTGCTAATGATTGAGTTCTATTTGATCTTAACCGCA---------GTT---GCCAAAGTGCCTGGC---GGAGTC------------------------------------TTCTGGCGC---TTGTTGGTCGGCTCTGTTGTCATGCTCGGCTTTGGATTTGCTGGTGAA---------ACA------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GACGTG------------------CAGTTGGCA---TTCTGGCCAGCAATGGCGGCATGGGGCTTCATTATCTGGGAAATC---------------TTC------AAA---GGTGAAGCAAGCCAGATCAATGCCGGT------CTT---TCTAACGATCATGTG---CAG---AAA---GCT---TAT---AGG---ACAATG---ACCCTTCTTGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLAVPLLMIEFYLILTA---V-AKVPG-GV------------FWR-LLVGSVVMLGFGFAGE---T------G--M-----------M----------------------DV------QLA-FWPAMAAWGFIIWEI-----F--K-GEASQINAG--L-SNDHV-Q-K-A-Y-R-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-SAR92]_JX863169 [I-Gamma2-SAR92] MALINA_OTU11_168_L_env_samples_JX863169 gi|425477288|gb|JX863169| Uncultured bacterium clone MALINA OTU11 168 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU11 168 L putative proteorhodopsin gene, partial cds JX863169 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 11Aug2009 80m_depth Arctic Ocean marine 70.68 -139.62 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGCTAACTGTGCCGCTGCTAATGATTGAGTTCTATTTGGTCTTAACCGCAGTTGCCAAAGTGCCTGGCGGAGTTTTCTGGCGCTTGTTGGTCGGCTCTGTTGTCATGCTCGGCTTTGGATTTGCTGGTGAAACAGGCATGATGGACGTGCAGTTGGCATTCTGGCCAGCAATGGCGGCATGGGGCTTCATTATCTGGGAAATCTTCAAAGGTGAAGCAAGCCAGATCAATGCCGGTCTTTCTAACGACCATGTGCAGAAAGCTTATAGGACAATGACCCTTCTTGTGACTGTA WLLTVPLLMIEFYLVLTAVAKVPGGVFWRLLVGSVVMLGFGFAGETGMMDVQLAFWPAMAAWGFIIWEIFKGEASQINAGLSNDHVQKAYRTMTLLVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGCTAACTGTGCCGCTGCTAATGATTGAGTTCTATTTGGTCTTAACCGCA---------GTT---GCCAAAGTGCCTGGC---GGAGTT------------------------------------TTCTGGCGC---TTGTTGGTCGGCTCTGTTGTCATGCTCGGCTTTGGATTTGCTGGTGAA---------ACA------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GACGTG------------------CAGTTGGCA---TTCTGGCCAGCAATGGCGGCATGGGGCTTCATTATCTGGGAAATC---------------TTC------AAA---GGTGAAGCAAGCCAGATCAATGCCGGT------CTT---TCTAACGACCATGTG---CAG---AAA---GCT---TAT---AGG---ACAATG---ACCCTTCTTGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLMIEFYLVLTA---V-AKVPG-GV------------FWR-LLVGSVVMLGFGFAGE---T------G--M-----------M----------------------DV------QLA-FWPAMAAWGFIIWEI-----F--K-GEASQINAG--L-SNDHV-Q-K-A-Y-R-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-SAR92]_JX863262 [I-Gamma2-SAR92] MALINA_OTU11_237_L_env_samples_JX863262 gi|425477474|gb|JX863262| Uncultured bacterium clone MALINA OTU11 237 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU11 237 L putative proteorhodopsin mRNA, partial cds JX863262 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 11Aug2009 65m_depth Arctic Ocean marine 70.68 -139.62 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGCTAACTGTGCCGCTGCTAATGATTGAGTTCTATTTGATCTTAACCGCAGTTGCCAAAGTGCCTGGCGGAGTTTTCTGGCGCTTGTTGGTCGGCTCTGTTGTCATGCTCGGCTTTGGATTTGCTGGTGAAACAGGCATGATGGACGTGCAGTTGGCATTCTGGCCAGCAATGACGGCATGGGGCTTCATTATCTGGGAAATCTTCAAAGGTGAAGCAAGCCAGATCAATGCCGGTCTTTCTAACGACCATGTGCAGAAAGCTTATAGGACAATGACCCTTCTTGTGACTGTA WLLTVPLLMIEFYLILTAVAKVPGGVFWRLLVGSVVMLGFGFAGETGMMDVQLAFWPAMTAWGFIIWEIFKGEASQINAGLSNDHVQKAYRTMTLLVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGCTAACTGTGCCGCTGCTAATGATTGAGTTCTATTTGATCTTAACCGCA---------GTT---GCCAAAGTGCCTGGC---GGAGTT------------------------------------TTCTGGCGC---TTGTTGGTCGGCTCTGTTGTCATGCTCGGCTTTGGATTTGCTGGTGAA---------ACA------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GACGTG------------------CAGTTGGCA---TTCTGGCCAGCAATGACGGCATGGGGCTTCATTATCTGGGAAATC---------------TTC------AAA---GGTGAAGCAAGCCAGATCAATGCCGGT------CTT---TCTAACGACCATGTG---CAG---AAA---GCT---TAT---AGG---ACAATG---ACCCTTCTTGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLMIEFYLILTA---V-AKVPG-GV------------FWR-LLVGSVVMLGFGFAGE---T------G--M-----------M----------------------DV------QLA-FWPAMTAWGFIIWEI-----F--K-GEASQINAG--L-SNDHV-Q-K-A-Y-R-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-SAR92]_JX863253 [I-Gamma2-SAR92] MALINA_OTU11_236_L_env_samples_JX863253 gi|425477456|gb|JX863253| Uncultured bacterium clone MALINA OTU11 236 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU11 236 L putative proteorhodopsin mRNA, partial cds JX863253 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 11Aug2009 65m_depth Arctic Ocean marine 70.68 -139.62 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGCTAACTGTGCCGCTGCTAATGATTGAGTTCTATTTGATCTTAACCGCAGTTGCCAAAGTGCCTGGCGGAGTTTTCTGGCGCTTGTTGGTCGGCTCTGTTGTCATGCTCGGCTTTGGATTTGCTGGTGAAACAGGCATGATGGACGTGCAGTTGGCATTCTGGCCAGCAATGGCGGCATGGGGCTTCATTATCTGGGAAATCTTCGAAGGTGAAGCAAGCCAGATCAATGCCGGTCTTTCTAACGACCATGTGCAGAAAGCTTATAGGACAATGACCCTTCTTGTGACTGTA WLLTVPLLMIEFYLILTAVAKVPGGVFWRLLVGSVVMLGFGFAGETGMMDVQLAFWPAMAAWGFIIWEIFEGEASQINAGLSNDHVQKAYRTMTLLVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGCTAACTGTGCCGCTGCTAATGATTGAGTTCTATTTGATCTTAACCGCA---------GTT---GCCAAAGTGCCTGGC---GGAGTT------------------------------------TTCTGGCGC---TTGTTGGTCGGCTCTGTTGTCATGCTCGGCTTTGGATTTGCTGGTGAA---------ACA------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GACGTG------------------CAGTTGGCA---TTCTGGCCAGCAATGGCGGCATGGGGCTTCATTATCTGGGAAATC---------------TTC------GAA---GGTGAAGCAAGCCAGATCAATGCCGGT------CTT---TCTAACGACCATGTG---CAG---AAA---GCT---TAT---AGG---ACAATG---ACCCTTCTTGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLMIEFYLILTA---V-AKVPG-GV------------FWR-LLVGSVVMLGFGFAGE---T------G--M-----------M----------------------DV------QLA-FWPAMAAWGFIIWEI-----F--E-GEASQINAG--L-SNDHV-Q-K-A-Y-R-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-SAR92]_JX863258 [I-Gamma2-SAR92] MALINA_OTU11_210_L_env_samples_JX863258 gi|425477466|gb|JX863258| Uncultured bacterium clone MALINA OTU11 210 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU11 210 L putative proteorhodopsin mRNA, partial cds JX863258 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 11Aug2009 65m_depth Arctic Ocean marine 70.68 -139.62 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGCTAACTGTGCCGCTGCTAATGATTGAGTTCTATTTGATCTTAACCGCAGTTGCCAAAGTGCCTGGCGGAGTTTTCTGGCGCTTGTTGGTCGGCTCTGTTGTCATGCTCGGCTTTGGATTTGCTGGTGAAACAGGCATGATGGACGCGCAGTTGGCATTCTGGCCAGCAATGGCGGCATGGGGCTTCATTATCTGGGAAATCTTCAAAGGTGAAGCAAGCCAGATCAATGCCGGTCTTTCTAACGACCATGTGCAGAAAGCTTATAGGACAATGACCCTTCTTGTGACTGTA WLLTVPLLMIEFYLILTAVAKVPGGVFWRLLVGSVVMLGFGFAGETGMMDAQLAFWPAMAAWGFIIWEIFKGEASQINAGLSNDHVQKAYRTMTLLVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGCTAACTGTGCCGCTGCTAATGATTGAGTTCTATTTGATCTTAACCGCA---------GTT---GCCAAAGTGCCTGGC---GGAGTT------------------------------------TTCTGGCGC---TTGTTGGTCGGCTCTGTTGTCATGCTCGGCTTTGGATTTGCTGGTGAA---------ACA------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GACGCG------------------CAGTTGGCA---TTCTGGCCAGCAATGGCGGCATGGGGCTTCATTATCTGGGAAATC---------------TTC------AAA---GGTGAAGCAAGCCAGATCAATGCCGGT------CTT---TCTAACGACCATGTG---CAG---AAA---GCT---TAT---AGG---ACAATG---ACCCTTCTTGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLMIEFYLILTA---V-AKVPG-GV------------FWR-LLVGSVVMLGFGFAGE---T------G--M-----------M----------------------DA------QLA-FWPAMAAWGFIIWEI-----F--K-GEASQINAG--L-SNDHV-Q-K-A-Y-R-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-SAR92]_FJ618968 [I-Gamma2-SAR92] PR_108_08_24_env_samples_FJ618968 gi|223046819|gb|FJ618968| Uncultured bacterium clone PR 108 08 24 proteorhodopsin gene, partial cds Uncultured bacterium clone PR 108 08 24 proteorhodopsin gene, partial cds FJ618968 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-juil-09 #na Arctic_Ocean Arctic Ocean marine 71.37 -156.68 Photoheterotrophic microbes in the Arctic Ocean in summer and winter Cottrell,M.T. and Kirchman,D.L. Appl. Environ. Microbiol. 75 (15), 49584966 (2009) 19502441 #na TACGTTGACTGGTTGCTAACTGTGCCGCTGCTAATGATTGAGTTCTACTTGATCTTGTCTGCAGTCGCCAAAGTGCCTAGCGGTGTTTTCTGGCGCTTGTTGGTCGGCTCCGTTGTTATGCTTGGCTTTGGCTTTGCTGGTGAAACAGGCATGATGTCCGCGCAGTTGGCATTCTGGCCAGCAATGGCAGCATGGGGCTTCATTATCTGGGAAATCTTCAAAGGCGAAGCAAGCCAGATCAATGCAGGCCTTTCGAACGACCATGTGCAGAAGGCTTATAGGACGATGACTCTTCTTGTAACTGTAGGCTGGGCAATTTAT YVDWLLTVPLLMIEFYLILSAVAKVPSGVFWRLLVGSVVMLGFGFAGETGMMSAQLAFWPAMAAWGFIIWEIFKGEASQINAGLSNDHVQKAYRTMTLLVTVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACGTTGACTGG------------------------TTGCTAACTGTGCCGCTGCTAATGATTGAGTTCTACTTGATCTTGTCTGCA---------GTC---GCCAAAGTGCCTAGC---GGTGTT------------------------------------TTCTGGCGC---TTGTTGGTCGGCTCCGTTGTTATGCTTGGCTTTGGCTTTGCTGGTGAA---------ACA------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------TCCGCG------------------CAGTTGGCA---TTCTGGCCAGCAATGGCAGCATGGGGCTTCATTATCTGGGAAATC---------------TTC------AAA---GGCGAAGCAAGCCAGATCAATGCAGGC------CTT---TCGAACGACCATGTG---CAG---AAG---GCT---TAT---AGG---ACGATG---ACTCTTCTTGTAACTGTA---------------------------------------------------------------GGCTGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLMIEFYLILSA---V-AKVPS-GV------------FWR-LLVGSVVMLGFGFAGE---T------G--M-----------M----------------------SA------QLA-FWPAMAAWGFIIWEI-----F--K-GEASQINAG--L-SNDHV-Q-K-A-Y-R-TM-TLLVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [I-Gamma2-SAR92]_JX863168 [I-Gamma2-SAR92] MALINA_OTU11_157_L_env_samples_JX863168 gi|425477286|gb|JX863168| Uncultured bacterium clone MALINA OTU11 157 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU11 157 L putative proteorhodopsin gene, partial cds JX863168 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 11Aug2009 80m_depth Arctic Ocean marine 70.68 -139.62 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGCTAACTGTGCCGCTGCTAATGATTGAGTTCTACTTGATCTTGTCTGCAGTCGCCAAAGTGCCTGGCGGTGTTTTCTGGCGCTTGTTGGTCGGCTCCGTTGTTATGCTCAGCTTTGGTTTTGCTGGTGAAACAGGCATGATGTCCGCGCAGTTGGCATTCTGGCCAGCAATGGCCGCATGGGGCTTCATTATCTGGGAAATCTTCAAAGGCGAAGCAAGCCAGATCAATGCAGGCCTTTCGAACGACCATGTGCAGAAAGCTTATAAGACAATGACTCTTCTTGTAACTGTA WLLTVPLLMIEFYLILSAVAKVPGGVFWRLLVGSVVMLSFGFAGETGMMSAQLAFWPAMAAWGFIIWEIFKGEASQINAGLSNDHVQKAYKTMTLLVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGCTAACTGTGCCGCTGCTAATGATTGAGTTCTACTTGATCTTGTCTGCA---------GTC---GCCAAAGTGCCTGGC---GGTGTT------------------------------------TTCTGGCGC---TTGTTGGTCGGCTCCGTTGTTATGCTCAGCTTTGGTTTTGCTGGTGAA---------ACA------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------TCCGCG------------------CAGTTGGCA---TTCTGGCCAGCAATGGCCGCATGGGGCTTCATTATCTGGGAAATC---------------TTC------AAA---GGCGAAGCAAGCCAGATCAATGCAGGC------CTT---TCGAACGACCATGTG---CAG---AAA---GCT---TAT---AAG---ACAATG---ACTCTTCTTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLMIEFYLILSA---V-AKVPG-GV------------FWR-LLVGSVVMLSFGFAGE---T------G--M-----------M----------------------SA------QLA-FWPAMAAWGFIIWEI-----F--K-GEASQINAG--L-SNDHV-Q-K-A-Y-K-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-SAR92]_JX863254 [I-Gamma2-SAR92] MALINA_OTU11_150_L_env_samples_JX863254 gi|425477458|gb|JX863254| Uncultured bacterium clone MALINA OTU11 150 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU11 150 L putative proteorhodopsin mRNA, partial cds JX863254 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 08Aug2009 50m_depth Arctic Ocean marine 70.8 -133.73 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGCTAACTGTGCCGCTGCTAATGATTGAGTTCTACTTGATCTTGTCTGCAGTCGCCAAAGTGCCTGGCGGTGTTTTCTGGCGCTTGTTGGTCGGCTCTGTTGTTATGCTCGGCTTTGGCTTTGCTGGTGAAACAGGCATGATGTCCGCGCAGTTGGCATTCTGGCCAGCAATGGCAGCATGGGGCTTCATTATCTGGGAAATCTTCAAAGGCGAAGCAAGCCAGATCAATGCAGGCCTTTCGAACGACCATGTGCAGAAAGCTTATAGGACAATGACCCTTCTTGTAACTGTA WLLTVPLLMIEFYLILSAVAKVPGGVFWRLLVGSVVMLGFGFAGETGMMSAQLAFWPAMAAWGFIIWEIFKGEASQINAGLSNDHVQKAYRTMTLLVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGCTAACTGTGCCGCTGCTAATGATTGAGTTCTACTTGATCTTGTCTGCA---------GTC---GCCAAAGTGCCTGGC---GGTGTT------------------------------------TTCTGGCGC---TTGTTGGTCGGCTCTGTTGTTATGCTCGGCTTTGGCTTTGCTGGTGAA---------ACA------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------TCCGCG------------------CAGTTGGCA---TTCTGGCCAGCAATGGCAGCATGGGGCTTCATTATCTGGGAAATC---------------TTC------AAA---GGCGAAGCAAGCCAGATCAATGCAGGC------CTT---TCGAACGACCATGTG---CAG---AAA---GCT---TAT---AGG---ACAATG---ACCCTTCTTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLMIEFYLILSA---V-AKVPG-GV------------FWR-LLVGSVVMLGFGFAGE---T------G--M-----------M----------------------SA------QLA-FWPAMAAWGFIIWEI-----F--K-GEASQINAG--L-SNDHV-Q-K-A-Y-R-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-SAR92]_JX863263 [I-Gamma2-SAR92] MALINA_OTU11_323_L_env_samples_JX863263 gi|425477476|gb|JX863263| Uncultured bacterium clone MALINA OTU11 323 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU11 323 L putative proteorhodopsin mRNA, partial cds JX863263 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 02Aug2009 40m_depth Arctic Ocean marine 69.61 -138.23 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGCTGACTGTGCCGCTGCTAATGATTGAGTTCTACTTGATCTTGTCTGCAGTCGCCAAAGTGCCTGGCGGTGTTTTCTGGCGCTTGTTGGTCGGCTCTGTTGTTATGCTCGGCTTTGGCTTTGCTGGTGAAACAGACATGATGTCCGCGCAGTTGGCCTTCTGGCCAGCAATGGCAGCATGGGGCTTCATTATCTGGGAAATCTTCAAAGGCGAAGCAAGCCAGATCAATGCAGGCCTTTCGAACGATCATGTGCAGAAAGCTTATAGGACAATGACCCTTCTTGTAACTGTA WLLTVPLLMIEFYLILSAVAKVPGGVFWRLLVGSVVMLGFGFAGETDMMSAQLAFWPAMAAWGFIIWEIFKGEASQINAGLSNDHVQKAYRTMTLLVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGCTGACTGTGCCGCTGCTAATGATTGAGTTCTACTTGATCTTGTCTGCA---------GTC---GCCAAAGTGCCTGGC---GGTGTT------------------------------------TTCTGGCGC---TTGTTGGTCGGCTCTGTTGTTATGCTCGGCTTTGGCTTTGCTGGTGAA---------ACA------------------GAC------ATG---------------------------------ATG------------------------------------------------------------------TCCGCG------------------CAGTTGGCC---TTCTGGCCAGCAATGGCAGCATGGGGCTTCATTATCTGGGAAATC---------------TTC------AAA---GGCGAAGCAAGCCAGATCAATGCAGGC------CTT---TCGAACGATCATGTG---CAG---AAA---GCT---TAT---AGG---ACAATG---ACCCTTCTTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLMIEFYLILSA---V-AKVPG-GV------------FWR-LLVGSVVMLGFGFAGE---T------D--M-----------M----------------------SA------QLA-FWPAMAAWGFIIWEI-----F--K-GEASQINAG--L-SNDHV-Q-K-A-Y-R-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-SAR92]_JX863171 [I-Gamma2-SAR92] MALINA_OTU11_392_L_env_samples_JX863171 gi|425477292|gb|JX863171| Uncultured bacterium clone MALINA OTU11 392 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU11 392 L putative proteorhodopsin gene, partial cds JX863171 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 16Aug2009 0m_depth Arctic Ocean marine 69.51 -133.42 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGCTAACTGTGCCGCTGCTAATGATTGAGTTCTACTTGATCTTGTCTGCAGTCGCCAAAGTGCCTGGCGGTGTTTTCTGGCGCTTGCTGGTCGGCTCTGTTGTTATGCTCGGCTTTGGCTTTGCTGGTGAAACAGGCATGATGTCCGCGCAGTTGGCATTCTGGCCAGCAATGGCAGCATGGGGCTTCATTATCTGGGAAATCTTCAAAGGCGAAGCAAGCCAGATCAATGCAGGCCTTTCGAACGACCATGTGCGGAAAGCTTATAGGACAATGACCCTTCTTGTAACTGTA WLLTVPLLMIEFYLILSAVAKVPGGVFWRLLVGSVVMLGFGFAGETGMMSAQLAFWPAMAAWGFIIWEIFKGEASQINAGLSNDHVRKAYRTMTLLVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGCTAACTGTGCCGCTGCTAATGATTGAGTTCTACTTGATCTTGTCTGCA---------GTC---GCCAAAGTGCCTGGC---GGTGTT------------------------------------TTCTGGCGC---TTGCTGGTCGGCTCTGTTGTTATGCTCGGCTTTGGCTTTGCTGGTGAA---------ACA------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------TCCGCG------------------CAGTTGGCA---TTCTGGCCAGCAATGGCAGCATGGGGCTTCATTATCTGGGAAATC---------------TTC------AAA---GGCGAAGCAAGCCAGATCAATGCAGGC------CTT---TCGAACGACCATGTG---CGG---AAA---GCT---TAT---AGG---ACAATG---ACCCTTCTTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLMIEFYLILSA---V-AKVPG-GV------------FWR-LLVGSVVMLGFGFAGE---T------G--M-----------M----------------------SA------QLA-FWPAMAAWGFIIWEI-----F--K-GEASQINAG--L-SNDHV-R-K-A-Y-R-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-SAR92]_JX863166 [I-Gamma2-SAR92] MALINA_OTU11_084_L_env_samples_JX863166 gi|425477282|gb|JX863166| Uncultured bacterium clone MALINA OTU11 084 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU11 084 L putative proteorhodopsin gene, partial cds JX863166 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 08Aug2009 70m_depth Arctic Ocean marine 70.8 -133.73 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGCTAACTGTGCCGCTGCTAATGATTGAGTTCTACTTGATCTTGTCTACAGTCGCCAAAGTGCCTGGCGGTGTTTTCTGGCGCTTGTTGGTCGGCTCTGTTGTTATGCTCGGCTTTGGCTTTGCTGGTGAAACAGGCATGATGTCCGCGCAGTTGGCATTCTGGCCAGCAATGGCGGCATGGGGCTTCATTATCTGGGAAATCTTCAAAGGCGAAGCAAGCCAGATCAATGCAGGCCTTTCGAACGACCATGTGCAGAAAGCTTACAGGACAATGACCCTTCTTGTAACTGTA WLLTVPLLMIEFYLILSTVAKVPGGVFWRLLVGSVVMLGFGFAGETGMMSAQLAFWPAMAAWGFIIWEIFKGEASQINAGLSNDHVQKAYRTMTLLVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGCTAACTGTGCCGCTGCTAATGATTGAGTTCTACTTGATCTTGTCTACA---------GTC---GCCAAAGTGCCTGGC---GGTGTT------------------------------------TTCTGGCGC---TTGTTGGTCGGCTCTGTTGTTATGCTCGGCTTTGGCTTTGCTGGTGAA---------ACA------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------TCCGCG------------------CAGTTGGCA---TTCTGGCCAGCAATGGCGGCATGGGGCTTCATTATCTGGGAAATC---------------TTC------AAA---GGCGAAGCAAGCCAGATCAATGCAGGC------CTT---TCGAACGACCATGTG---CAG---AAA---GCT---TAC---AGG---ACAATG---ACCCTTCTTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLMIEFYLILST---V-AKVPG-GV------------FWR-LLVGSVVMLGFGFAGE---T------G--M-----------M----------------------SA------QLA-FWPAMAAWGFIIWEI-----F--K-GEASQINAG--L-SNDHV-Q-K-A-Y-R-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-SAR92]_JX863167 [I-Gamma2-SAR92] MALINA_OTU11_149_L_env_samples_JX863167 gi|425477284|gb|JX863167| Uncultured bacterium clone MALINA OTU11 149 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU11 149 L putative proteorhodopsin gene, partial cds JX863167 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 11Aug2009 80m_depth Arctic Ocean marine 70.68 -139.62 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGCTAACTGTGCCGCTGCTAATGATTGAGTTCTACTTGATCTTGTCTGCAGTTGCTAAAGTGCCTAGCGGTGTTTTCTGGCGCTTGTTGGTCGGCTCTGTTGTCATGCTCGGCTTTGGTTTTGCTGGTGAAACAGGCATGATGGCCGCAAAGTTGGCATTCTGGCCAGCAGTGGCAGCATGGGGCTTCATTATCTGGGAAATCTTCAAAGGCGAAGCAAGCCAGATCAATGCAGGCCTTTCGAACGACCATGTGCAGAAAGCTTATAGGACAATGACCCTTCTTGTGACTGTA WLLTVPLLMIEFYLILSAVAKVPSGVFWRLLVGSVVMLGFGFAGETGMMAAKLAFWPAVAAWGFIIWEIFKGEASQINAGLSNDHVQKAYRTMTLLVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGCTAACTGTGCCGCTGCTAATGATTGAGTTCTACTTGATCTTGTCTGCA---------GTT---GCTAAAGTGCCTAGC---GGTGTT------------------------------------TTCTGGCGC---TTGTTGGTCGGCTCTGTTGTCATGCTCGGCTTTGGTTTTGCTGGTGAA---------ACA------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GCCGCA------------------AAGTTGGCA---TTCTGGCCAGCAGTGGCAGCATGGGGCTTCATTATCTGGGAAATC---------------TTC------AAA---GGCGAAGCAAGCCAGATCAATGCAGGC------CTT---TCGAACGACCATGTG---CAG---AAA---GCT---TAT---AGG---ACAATG---ACCCTTCTTGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLMIEFYLILSA---V-AKVPS-GV------------FWR-LLVGSVVMLGFGFAGE---T------G--M-----------M----------------------AA------KLA-FWPAVAAWGFIIWEI-----F--K-GEASQINAG--L-SNDHV-Q-K-A-Y-R-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-SAR92]_JX863320 [I-Gamma2-SAR92] MALINA_OTU47_337_L_env_samples_JX863320 gi|425477590|gb|JX863320| Uncultured bacterium clone MALINA OTU47 337 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU47 337 L putative proteorhodopsin mRNA, partial cds JX863320 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 02Aug2009 3m_depth Arctic Ocean marine 69.61 -138.23 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTATTAACTGTACCGTTGTTAATGATTGAATTTTACTTGATTCTATCTGCAGTATCTTCAAAAGTACCAGCAGGAATTTTTTGGCGTCTACTCCTAGGTACTGTAGTCATGTTGGGCTTCGGTTATGCTGGTGAGACAGGAATGATGGATGCTAAAATTGCATTCATTCCTTCAATGGCAGCTTGGGGTTTCATAATCTGGGAAATCTTTGGTGGCGAAGCAAGCAAGGTTAATGCTGGTCTTGCTAATCCTCACGTCCAAAAAGCTTATAAGACAATGACTATACTAGTTACTGTT WLLTVPLLMIEFYLILSAVSSKVPAGIFWRLLLGTVVMLGFGYAGETGMMDAKIAFIPSMAAWGFIIWEIFGGEASKVNAGLANPHVQKAYKTMTILVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTATTAACTGTACCGTTGTTAATGATTGAATTTTACTTGATTCTATCTGCA---------GTATCTTCAAAAGTACCAGCA---GGAATT------------------------------------TTTTGGCGT---CTACTCCTAGGTACTGTAGTCATGTTGGGCTTCGGTTATGCTGGTGAG---------ACA------------------GGA------ATG---------------------------------ATG------------------------------------------------------------------GATGCT------------------AAAATTGCA---TTCATTCCTTCAATGGCAGCTTGGGGTTTCATAATCTGGGAAATC---------------TTT------GGT---GGCGAAGCAAGCAAGGTTAATGCTGGT------CTT---GCTAATCCTCACGTC---CAA---AAA---GCT---TAT---AAG---ACAATG---ACTATACTAGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLMIEFYLILSA---VSSKVPA-GI------------FWR-LLLGTVVMLGFGYAGE---T------G--M-----------M----------------------DA------KIA-FIPSMAAWGFIIWEI-----F--G-GEASKVNAG--L-ANPHV-Q-K-A-Y-K-TM-TILVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-SAR92]_FJ618962 [I-Gamma2-SAR92] PR_108_08_18_env_samples_FJ618962 gi|223046807|gb|FJ618962| Uncultured bacterium clone PR 108 08 18 proteorhodopsin gene, partial cds Uncultured bacterium clone PR 108 08 18 proteorhodopsin gene, partial cds FJ618962 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-juil-09 #na Arctic_Ocean Arctic Ocean marine 71.37 -156.68 Photoheterotrophic microbes in the Arctic Ocean in summer and winter Cottrell,M.T. and Kirchman,D.L. Appl. Environ. Microbiol. 75 (15), 49584966 (2009) 19502441 #na TATGTAGATTGGCTATTGACCGTACCGCTGTTGATGATCGAATTTTACTTGATTCTATCTGCTGTAGCGAAAGTGCCTGCTGGCGTTTTCTGGCGCTTACTGCTCGGCACAATAGTTATGCTCGGCTTCGGCTACGTCGGCGAAGTTGGCATACTGGATCCACAAATCGCTTTCTGGCCGTCAATGGCAGCTTGGGGTTTCATTATCTGGGAAATCTTTAGAGGTGAAGCAAGCAAGATCAATGCTGGCTTAGCAAATCCTAACGTTCAAAAAGCATACAAAACAATGACGCTCCTCGTCACTGTCGGCTGGGCGATATAT YVDWLLTVPLLMIEFYLILSAVAKVPAGVFWRLLLGTIVMLGFGYVGEVGILDPQIAFWPSMAAWGFIIWEIFRGEASKINAGLANPNVQKAYKTMTLLVTVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTAGATTGG------------------------CTATTGACCGTACCGCTGTTGATGATCGAATTTTACTTGATTCTATCTGCT---------GTA---GCGAAAGTGCCTGCT---GGCGTT------------------------------------TTCTGGCGC---TTACTGCTCGGCACAATAGTTATGCTCGGCTTCGGCTACGTCGGCGAA---------GTT------------------GGC------ATA---------------------------------CTG------------------------------------------------------------------GATCCA------------------CAAATCGCT---TTCTGGCCGTCAATGGCAGCTTGGGGTTTCATTATCTGGGAAATC---------------TTT------AGA---GGTGAAGCAAGCAAGATCAATGCTGGC------TTA---GCAAATCCTAACGTT---CAA---AAA---GCA---TAC---AAA---ACAATG---ACGCTCCTCGTCACTGTC---------------------------------------------------------------GGCTGG---------GCGATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLMIEFYLILSA---V-AKVPA-GV------------FWR-LLLGTIVMLGFGYVGE---V------G--I-----------L----------------------DP------QIA-FWPSMAAWGFIIWEI-----F--R-GEASKINAG--L-ANPNV-Q-K-A-Y-K-TM-TLLVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [I-Gamma2-SAR92]_JX863317 [I-Gamma2-SAR92] MALINA_OTU45_172_L_env_samples_JX863317 gi|425477584|gb|JX863317| Uncultured bacterium clone MALINA OTU45 172 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU45 172 L putative proteorhodopsin mRNA, partial cds JX863317 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 08Aug2009 3m_depth Arctic Ocean marine 70.8 -133.73 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTATTAACTGTACCGTTATTAATGATTGAGTTCTATTTGATTCTTTCTGCAGTAGCAAAAGTACCTGCTGGTGTTTTTTGGCGTTTATTAGGTGGTAGCGTTGTAATGCTTGGTTTCGGTTATGCTGGTGAAGTTGGATTGATGGACGCTAAAGTAGCTTTCGTCCCATCAATGGCGGCATGGTTTTTCATCATTTGGGAAATCTTCCGTGGTGAAGCAAGTCGAATCAATGCTGGATTGTCTAATGTTAACGTCCAAAAAGCCTATAAATACATGTTGATCTTAGTAACAGTC WLLTVPLLMIEFYLILSAVAKVPAGVFWRLLGGSVVMLGFGYAGEVGLMDAKVAFVPSMAAWFFIIWEIFRGEASRINAGLSNVNVQKAYKYMLILVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTATTAACTGTACCGTTATTAATGATTGAGTTCTATTTGATTCTTTCTGCA---------GTA---GCAAAAGTACCTGCT---GGTGTT------------------------------------TTTTGGCGT---TTATTAGGTGGTAGCGTTGTAATGCTTGGTTTCGGTTATGCTGGTGAA---------GTT------------------GGA------TTG---------------------------------ATG------------------------------------------------------------------GACGCT------------------AAAGTAGCT---TTCGTCCCATCAATGGCGGCATGGTTTTTCATCATTTGGGAAATC---------------TTC------CGT---GGTGAAGCAAGTCGAATCAATGCTGGA------TTG---TCTAATGTTAACGTC---CAA---AAA---GCC---TAT---AAA---TACATG---TTGATCTTAGTAACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLMIEFYLILSA---V-AKVPA-GV------------FWR-LLGGSVVMLGFGYAGE---V------G--L-----------M----------------------DA------KVA-FVPSMAAWFFIIWEI-----F--R-GEASRINAG--L-SNVNV-Q-K-A-Y-K-YM-LILVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-SAR92]_JX863318 [I-Gamma2-SAR92] MALINA_OTU45_200_L_env_samples_JX863318 gi|425477586|gb|JX863318| Uncultured bacterium clone MALINA OTU45 200 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU45 200 L putative proteorhodopsin mRNA, partial cds JX863318 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 08Aug2009 3m_depth Arctic Ocean marine 70.8 -133.73 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTATTAACTGTACCGTTATTAATGATTGAGTTCTATTTGATTCTTTCTGCAGTAGCAAAAGTACCTGCCGGTGTTTTCTGGCGTTTATTAGGTGGTAGCGTTGTAATGCTTGGTTTCGGTTATGCTGGTGAAGTTGGATTGATGAACGCTAAAGTAGCTTTCGTCCCATCAATGGCAGCATGGTTTTTCATCATCTGGGAAATCTTCCGTGGTGAAGCAAGTCGAATCAATGCTGGATTGTCTAATGTTAACGTCCAAAAAGCCTATAAATACATGTTGATCTTAGTAACAGTC WLLTVPLLMIEFYLILSAVAKVPAGVFWRLLGGSVVMLGFGYAGEVGLMNAKVAFVPSMAAWFFIIWEIFRGEASRINAGLSNVNVQKAYKYMLILVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTATTAACTGTACCGTTATTAATGATTGAGTTCTATTTGATTCTTTCTGCA---------GTA---GCAAAAGTACCTGCC---GGTGTT------------------------------------TTCTGGCGT---TTATTAGGTGGTAGCGTTGTAATGCTTGGTTTCGGTTATGCTGGTGAA---------GTT------------------GGA------TTG---------------------------------ATG------------------------------------------------------------------AACGCT------------------AAAGTAGCT---TTCGTCCCATCAATGGCAGCATGGTTTTTCATCATCTGGGAAATC---------------TTC------CGT---GGTGAAGCAAGTCGAATCAATGCTGGA------TTG---TCTAATGTTAACGTC---CAA---AAA---GCC---TAT---AAA---TACATG---TTGATCTTAGTAACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLMIEFYLILSA---V-AKVPA-GV------------FWR-LLGGSVVMLGFGYAGE---V------G--L-----------M----------------------NA------KVA-FVPSMAAWFFIIWEI-----F--R-GEASRINAG--L-SNVNV-Q-K-A-Y-K-YM-LILVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-SAR92]_GU338818 [I-Gamma2-SAR92] TNB_B_65_30_env_samples_GU338818 gi|283574508|gb|GU338818| Uncultured Antarctic sea ice bacterium clone TNB B 65 30 putative proteorhodopsin gene, partial cds Uncultured Antarctic sea ice bacterium clone TNB B 65 30 putative proteorhodopsin gene, partial cds GU338818 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:219048 genomic_DNA other 27Aug-2010 #na middle_brine Antarctic Ocean marine -74.633333 164.216667 Proteorhodopsinbearing bacteria in Antarctic sea ice Koh,E.Y., AtamnaIsmaeel,N., Martin,A., Cowie,R.O., Beja,O., Davy,S.K., Maas,E.W. and Ryan,K.G. Appl. Environ. Microbiol. 76 (17), 59185925 (2010) 20601510 #na TGCGCGCAATTCATTCGCTATATAGATTGGCTACTAACTGTACCGTTATTAATGATTGAATTCTATTTGATTCTTTCTGCAGTAACAAAAGTACCTGCCGGTGTCTTTTGGCGTTTATTAGGTGGTACCGTTGTAATGCTTGGTTTCGGTTATGCTGGTGAAGTTGGATTGATGAACGCTAAAGTAGCTTTCGTCCCATCAATGGCGGCATGGTTCTTCATCATTTACGAAATCTTCCGCGGTGAAGCAAGCCGAATCAATGCTGGATTGGCTAATGTTCACGTCCAAAAAGCCTATAAATACATGTTGATCTTAGTGACAGTGGGATGGGCAATCTACCCAAGCTTGCGCGCA CAQFIRYIDWLLTVPLLMIEFYLILSAVTKVPAGVFWRLLGGTVVMLGFGYAGEVGLMNAKVAFVPSMAAWFFIIYEIFRGEASRINAGLANVHVQKAYKYMLILVTVGWAIYPSLRA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCGCGCAATTCATTCGCTATATAGATTGG------------------------CTACTAACTGTACCGTTATTAATGATTGAATTCTATTTGATTCTTTCTGCA---------GTA---ACAAAAGTACCTGCC---GGTGTC------------------------------------TTTTGGCGT---TTATTAGGTGGTACCGTTGTAATGCTTGGTTTCGGTTATGCTGGTGAA---------GTT------------------GGA------TTG---------------------------------ATG------------------------------------------------------------------AACGCT------------------AAAGTAGCT---TTCGTCCCATCAATGGCGGCATGGTTCTTCATCATTTACGAAATC---------------TTC------CGC---GGTGAAGCAAGCCGAATCAATGCTGGA------TTG---GCTAATGTTCACGTC---CAA---AAA---GCC---TAT---AAA---TACATG---TTGATCTTAGTGACAGTG---------------------------------------------------------------GGATGG---------GCAATCTACCCAAGCTTGCGCGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAQFIRYIDW--------LLTVPLLMIEFYLILSA---V-TKVPA-GV------------FWR-LLGGTVVMLGFGYAGE---V------G--L-----------M----------------------NA------KVA-FVPSMAAWFFIIYEI-----F--R-GEASRINAG--L-ANVHV-Q-K-A-Y-K-YM-LILVTV---------------------GW---AIYPSLRA---------------------------------------------------------------------------------------------- [I-Gamma2-SAR92]_GU338840 [I-Gamma2-SAR92] MCM_C_1B10_env_samples_GU338840 gi|283574550|gb|GU338840| Uncultured Antarctic sea ice bacterium clone MCM C 1B10 putative proteorhodopsin gene, partial cds Uncultured Antarctic sea ice bacterium clone MCM C 1B10 putative proteorhodopsin gene, partial cds GU338840 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:219048 genomic_DNA other 27Aug-2010 #na bottom_sea_ice Antarctic Ocean marine -77.850000 166.666667 Proteorhodopsinbearing bacteria in Antarctic sea ice Koh,E.Y., AtamnaIsmaeel,N., Martin,A., Cowie,R.O., Beja,O., Davy,S.K., Maas,E.W. and Ryan,K.G. Appl. Environ. Microbiol. 76 (17), 59185925 (2010) 20601510 #na CGCTATATCGATTGGCTATTAACCGTACCGTTACTAATGATTGAGTTCTACTTGATTCTTTCTGCAGTAACGAAAGTGCCTTCTGGTGTTTTCTGGCGTTTATTAGGTGGTACCGTTGTAATGCTTTCATTCGGTTATGCCGGAGAAGTTGGGTTGATGAACGCTAAAGTAGCGTTCTTTCCATCAATGGCAGCATGGTTTTTCATCATCTGGGAAATCTTTAAA RYIDWLLTVPLLMIEFYLILSAVTKVPSGVFWRLLGGTVVMLSFGYAGEVGLMNAKVAFFPSMAAWFFIIWEIFK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTATATCGATTGG------------------------CTATTAACCGTACCGTTACTAATGATTGAGTTCTACTTGATTCTTTCTGCA---------GTA---ACGAAAGTGCCTTCT---GGTGTT------------------------------------TTCTGGCGT---TTATTAGGTGGTACCGTTGTAATGCTTTCATTCGGTTATGCCGGAGAA---------GTT------------------GGG------TTG---------------------------------ATG------------------------------------------------------------------AACGCT------------------AAAGTAGCG---TTCTTTCCATCAATGGCAGCATGGTTTTTCATCATCTGGGAAATC---------------TTT------AAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYLILSA---V-TKVPS-GV------------FWR-LLGGTVVMLSFGYAGE---V------G--L-----------M----------------------NA------KVA-FFPSMAAWFFIIWEI-----F--K----------------------------------------------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-SAR92]_GU338842 [I-Gamma2-SAR92] MCM_C_1B32_env_samples_GU338842 gi|283574554|gb|GU338842| Uncultured Antarctic sea ice bacterium clone MCM C 1B32 putative proteorhodopsin gene, partial cds Uncultured Antarctic sea ice bacterium clone MCM C 1B32 putative proteorhodopsin gene, partial cds GU338842 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:219048 genomic_DNA other 27Aug-2010 #na bottom_sea_ice Antarctic Ocean marine -77.850000 166.666667 Proteorhodopsinbearing bacteria in Antarctic sea ice Koh,E.Y., AtamnaIsmaeel,N., Martin,A., Cowie,R.O., Beja,O., Davy,S.K., Maas,E.W. and Ryan,K.G. Appl. Environ. Microbiol. 76 (17), 59185925 (2010) 20601510 #na GCGCAATTCTTTAGATATATTGATTGGCTATTAACCGTACCGTTACTAATGATTGAGTTCTACTTGATTCTTTCTGCAGTAACGAAAGTGCCTTCTGGTGTTTTCTGGCGTTTATTAGGTGGTACCGTTGTAATGCTTTCATTCGGTTATGCCGGAGAAGTTGGGTTGATGAACGCTAAAGTAGCGTTCTTTCCATCAATGGCAGCATGGTTTTTCATCATCTGGGAAATCTTTAAAGGTGAAGCAAGCCGAATCAATGCTGGATTGGCCAATGTACACGTCCAAAAAGCATACAAATATATGTTGATTTTAGTAACAGTTGGCTGGGCGATATACCCAAGCTTGCGCGCAAGC AQFFRYIDWLLTVPLLMIEFYLILSAVTKVPSGVFWRLLGGTVVMLSFGYAGEVGLMNAKVAFFPSMAAWFFIIWEIFKGEASRINAGLANVHVQKAYKYMLILVTVGWAIYPSLRAS ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCAATTCTTTAGATATATTGATTGG------------------------CTATTAACCGTACCGTTACTAATGATTGAGTTCTACTTGATTCTTTCTGCA---------GTA---ACGAAAGTGCCTTCT---GGTGTT------------------------------------TTCTGGCGT---TTATTAGGTGGTACCGTTGTAATGCTTTCATTCGGTTATGCCGGAGAA---------GTT------------------GGG------TTG---------------------------------ATG------------------------------------------------------------------AACGCT------------------AAAGTAGCG---TTCTTTCCATCAATGGCAGCATGGTTTTTCATCATCTGGGAAATC---------------TTT------AAA---GGTGAAGCAAGCCGAATCAATGCTGGA------TTG---GCCAATGTACACGTC---CAA---AAA---GCA---TAC---AAA---TATATG---TTGATTTTAGTAACAGTT---------------------------------------------------------------GGCTGG---------GCGATATACCCAAGCTTGCGCGCAAGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AQFFRYIDW--------LLTVPLLMIEFYLILSA---V-TKVPS-GV------------FWR-LLGGTVVMLSFGYAGE---V------G--L-----------M----------------------NA------KVA-FFPSMAAWFFIIWEI-----F--K-GEASRINAG--L-ANVHV-Q-K-A-Y-K-YM-LILVTV---------------------GW---AIYPSLRAS--------------------------------------------------------------------------------------------- [I-Gamma2-SAR92]_JX863198 [I-Gamma2-SAR92] MALINA_OTU32_362_L_env_samples_JX863198 gi|425477346|gb|JX863198| Uncultured bacterium clone MALINA OTU32 362 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU32 362 L putative proteorhodopsin gene, partial cds JX863198 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 08-juil-09 0m_depth Pacific Ocean marine 53.36 -159.29 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGCTTACTGTGCCTTTGTTGATGGTTGAATTCTACTTGGTTCTATCTGCAGTTACTAAGGTACCTGCTGGTGTTTTCTGGCGCCTCCTCCTTGGCTCTATCATAATGCTAGTATTCGGTTACATGGGTGAGACAGGCATGATGGGTGTAACTATGGCATTTGTTCTTGCAATGCTAGGTTGGGGCTTCATAGTCTGGGAAATCTTCAAAGGTGAAGCAAGCCAGATCAATGCTGGACTTTCAAATGCTAACGTTCAGGGCGCTTATAAAGCGATGCTTATCTGTGTAACGCTT WLLTVPLLMVEFYLVLSAVTKVPAGVFWRLLLGSIIMLVFGYMGETGMMGVTMAFVLAMLGWGFIVWEIFKGEASQINAGLSNANVQGAYKAMLICVTL ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGCTTACTGTGCCTTTGTTGATGGTTGAATTCTACTTGGTTCTATCTGCA---------GTT---ACTAAGGTACCTGCT---GGTGTT------------------------------------TTCTGGCGC---CTCCTCCTTGGCTCTATCATAATGCTAGTATTCGGTTACATGGGTGAG---------ACA------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GGTGTA------------------ACTATGGCA---TTTGTTCTTGCAATGCTAGGTTGGGGCTTCATAGTCTGGGAAATC---------------TTC------AAA---GGTGAAGCAAGCCAGATCAATGCTGGA------CTT---TCAAATGCTAACGTT---CAG---GGC---GCT---TAT---AAA---GCGATG---CTTATCTGTGTAACGCTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLMVEFYLVLSA---V-TKVPA-GV------------FWR-LLLGSIIMLVFGYMGE---T------G--M-----------M----------------------GV------TMA-FVLAMLGWGFIVWEI-----F--K-GEASQINAG--L-SNANV-Q-G-A-Y-K-AM-LICVTL-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-SAR92]_JX863300 [I-Gamma2-SAR92] MALINA_OTU38_107_L_env_samples_JX863300 gi|425477550|gb|JX863300| Uncultured bacterium clone MALINA OTU38 107 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU38 107 L putative proteorhodopsin mRNA, partial cds JX863300 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 09Aug2009 3m_depth Arctic Ocean marine 71.57 -133.94 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTATTAACAGTGCCATTATTGATGATTGAGTTCTACTTGGTTCTATCTGCAGTAACTAAAGTGCCTGCTGGTGTCTTCTGGCGTTTACTGATTGGCTCGATCGTTATGCTTGGCTTCGGCTATGCTGGTGAGACAGGCATGATGGGTACAACAAGTGCCTTTGTTCTTGCAATGGCTGGTTGGGGATTCATCATTTGGGAAATCTTCAAAGGTGAAGCAAGCCGGATCAATGCTGGACTTTCAAACGCTAACGTTCAGGGCGCATACAAGGCAATGCTTATTTGCGTAACTATC WLLTVPLLMIEFYLVLSAVTKVPAGVFWRLLIGSIVMLGFGYAGETGMMGTTSAFVLAMAGWGFIIWEIFKGEASRINAGLSNANVQGAYKAMLICVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTATTAACAGTGCCATTATTGATGATTGAGTTCTACTTGGTTCTATCTGCA---------GTA---ACTAAAGTGCCTGCT---GGTGTC------------------------------------TTCTGGCGT---TTACTGATTGGCTCGATCGTTATGCTTGGCTTCGGCTATGCTGGTGAG---------ACA------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GGTACA------------------ACAAGTGCC---TTTGTTCTTGCAATGGCTGGTTGGGGATTCATCATTTGGGAAATC---------------TTC------AAA---GGTGAAGCAAGCCGGATCAATGCTGGA------CTT---TCAAACGCTAACGTT---CAG---GGC---GCA---TAC---AAG---GCAATG---CTTATTTGCGTAACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLMIEFYLVLSA---V-TKVPA-GV------------FWR-LLIGSIVMLGFGYAGE---T------G--M-----------M----------------------GT------TSA-FVLAMAGWGFIIWEI-----F--K-GEASRINAG--L-SNANV-Q-G-A-Y-K-AM-LICVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-SAR92]_EF182737 [I-Gamma2-SAR92] Gammaproteobacteria_HTCC2207_partial_EF182737 gi|141534100|gb|EF182737| Gamma proteobacterium HTCC2207 proteorhodopsin gene, partial cds Gamma proteobacterium HTCC2207 proteorhodopsin gene, partial cds EF182737 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Gammaproteobacteria/OMG group/SAR92 clade] taxon:314287 genomic_DNA strain 10APR2007 #na #na Pacific Ocean marine 44.65167 -124.277 The SAR92 clade: an abundant coastal clade of culturable marine bacteria possessing proteorhodopsin Stingl,U., Desiderio,R.A., Cho,J.C., Vergin,K.L. and Giovannoni,S.J. Appl. Environ. Microbiol. 73 (7), 22902296 (2007) 17293499 #na ATGACAAACAACTTATCCGCTAGCGATCCCGTTGGCATTTCATTTTGGCTAATATCTATGGCGTTGGTTGCTGCCACGGCATTCTTCTTCGTTGAACGCGACCGTGTCGCGGGCAAGTGGAAGACGTCTCTGACAGTCTCTGGTTTGGTTACTCTGATCGCTGCAGTGCACTATTTCTATATGCGCGATGTATGGGTAGCAACCGGAACTTCTCCAACCGTCTTCCGTTATATTGACTGGTTACTCACTGTGCCATTGTTGATGATCGAGTTTTACTTGATTCTATCTGCAGTGACTAAAGTACCAGCTGGTGTTTTCTGGCGCTTACTGATCGGTACTATCGCTATGCTTGGCTTCGGCTATGCTGGTGAAGCGGGTTGGATGGATGCGAAGATGGCGTTTATCCCATCAATGGCAGCTTGGTTCTACATCATCTGGGAAATCTTCAGAGGTGAAGCAAGCCAGATCAATGCTGGTCTAGCCAATGCTAACGTCCAAAAAGCCTATAAGACTATGACTCTGTTGGTCACTGTCGGTTGGTCAATCTACCCATTGGGTTACTTCTTCGGCTACTTTATGGGCAGCCAAGATCCAGTTATGCTGAACGTTATCTATAACGTAGCTGACTTCTGGAACAAGATTGCCTTCGGTGTCGTTATCTGGGCAGCAGCAGTAGCTGATTCAGAG MTNNLSASDPVGISFWLISMALVAATAFFFVERDRVAGKWKTSLTVSGLVTLIAAVHYFYMRDVWVATGTSPTVFRYIDWLLTVPLLMIEFYLILSAVTKVPAGVFWRLLIGTIAMLGFGYAGEAGWMDAKMAFIPSMAAWFYIIWEIFRGEASQINAGLANANVQKAYKTMTLLVTVGWSIYPLGYFFGYFMGSQDPVMLNVIYNVADFWNKIAFGVVIWAAAVADSE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGACAAACAACTTATCCGCTAGCGATCCCGTTGGCATTTCATTTTGGCTAATATCTATGGCGTTGGTTGCTGCCACGGCATTCTTCTTCGTTGAACGCGACCGTGTCGCGGGC---AAGTGGAAGACGTCTCTGACAGTCTCTGGTTTGGTTACTCTGATCGCTGCAGTGCACTATTTCTATATGCGCGATGTATGGGTA---------------------------------------------------GCAACCGGAACTTCTCCAACCGTCTTCCGTTATATTGACTGG------------------------TTACTCACTGTGCCATTGTTGATGATCGAGTTTTACTTGATTCTATCTGCA---------GTG---ACTAAAGTACCAGCT---GGTGTT------------------------------------TTCTGGCGC---TTACTGATCGGTACTATCGCTATGCTTGGCTTCGGCTATGCTGGTGAA---------GCG------------------GGT------TGG---------------------------------ATG------------------------------------------------------------------GATGCG------------------AAGATGGCG---TTTATCCCATCAATGGCAGCTTGGTTCTACATCATCTGGGAAATC---------------TTC------AGA---GGTGAAGCAAGCCAGATCAATGCTGGT------CTA---GCCAATGCTAACGTC---CAA---AAA---GCC---TAT---AAG---ACTATG---ACTCTGTTGGTCACTGTC---------------------------------------------------------------GGTTGG---------TCAATCTACCCATTGGGTTACTTCTTCGGCTACTTT---------------------------------------ATGGGCAGCCAAGATCCAGTTATGCTGAACGTTATCTATAACGTAGCTGACTTCTGGAACAAGATTGCCTTCGGTGTCGTTATCTGGGCAGCAGCAGTAGCTGAT---TCAGAG--------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------MTNNLSASDPVGISFWLISMALVAATAFFFVERDRVAG-KWKTSLTVSGLVTLIAAVHYFYMRDVWV-----------------ATGTSPTVFRYIDW--------LLTVPLLMIEFYLILSA---V-TKVPA-GV------------FWR-LLIGTIAMLGFGYAGE---A------G--W-----------M----------------------DA------KMA-FIPSMAAWFYIIWEI-----F--R-GEASQINAG--L-ANANV-Q-K-A-Y-K-TM-TLLVTV---------------------GW---SIYPLGYFFGYF-------------MGSQDPVMLNVIYNVADFWNKIAFGVVIWAAAVAD-SE--------------------------------------- [I-Gamma2-SAR92]_EF182736 [I-Gamma2-SAR92] HTCC6216_Gammaproteobacteria_EF182736 gi|141534098|gb|EF182736| Gamma proteobacterium HTCC6216 proteorhodopsin gene, partial cds Gamma proteobacterium HTCC6216 proteorhodopsin gene, partial cds EF182736 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Gammaproteobacteria] taxon:435702 genomic_DNA strain 10APR2007 #na #na Pacific Ocean marine 44.65167 -124.277 The SAR92 clade: an abundant coastal clade of culturable marine bacteria possessing proteorhodopsin Stingl,U., Desiderio,R.A., Cho,J.C., Vergin,K.L. and Giovannoni,S.J. Appl. Environ. Microbiol. 73 (7), 22902296 (2007) 17293499 #na ATGGCGTTGGTTGCTGCCACGGCATTCTTCTTCGTTGAACGCGACCGTGTCGCGGGCAAGTGGAAGACGTCTCTGACAGTCTCTGGTTTGGTTACTCTGATCGCTGCAGTGCACTATTTCTATATGCGCGATGTATGGGTAGCAACCGGTACTTCTCCAACCGTCTTCCGTTATATTGACTGGTTACTCACTGTGCCATTGTTGATGATCGAGTTTTACTTGATTCTATCTGCAGTGACTAAAGTACCAGCTGGTGTTTTCTGGCGCTTACTGATCGGTACTATCGCTATGCTTGGCTTCGGCTATGCTGGTGAAGCGGGTTGGATGGATGCGAAGATGGCGTTTATCCCATCAATGGCAGCTTGGTTCTACATCATCTGGGAAATCTTCAGAGGTGAAGCAAGCCAGATCAATGCTGGTCTAGCCAATGCTAACGTCCAAAAAGCCTATAAGACTATGACTCTGTTGGTCACTGTCGGTTGGTCAATCTACCCATTGGGTTACTTCTTCGGCTACTTTATGGGCAGCCAAGATCCAGTTATGCTGAACGTTATCTATAACGTAGCTGACTTCTGGAACAAGATTGCCTTCGGTGTCGTTATCTGGGCAGCAGCAGTAGCTGATTCAAAG MALVAATAFFFVERDRVAGKWKTSLTVSGLVTLIAAVHYFYMRDVWVATGTSPTVFRYIDWLLTVPLLMIEFYLILSAVTKVPAGVFWRLLIGTIAMLGFGYAGEAGWMDAKMAFIPSMAAWFYIIWEIFRGEASQINAGLANANVQKAYKTMTLLVTVGWSIYPLGYFFGYFMGSQDPVMLNVIYNVADFWNKIAFGVVIWAAAVADSK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGCGTTGGTTGCTGCCACGGCATTCTTCTTCGTTGAACGCGACCGTGTCGCGGGC---AAGTGGAAGACGTCTCTGACAGTCTCTGGTTTGGTTACTCTGATCGCTGCAGTGCACTATTTCTATATGCGCGATGTATGGGTA---------------------------------------------------GCAACCGGTACTTCTCCAACCGTCTTCCGTTATATTGACTGG------------------------TTACTCACTGTGCCATTGTTGATGATCGAGTTTTACTTGATTCTATCTGCA---------GTG---ACTAAAGTACCAGCT---GGTGTT------------------------------------TTCTGGCGC---TTACTGATCGGTACTATCGCTATGCTTGGCTTCGGCTATGCTGGTGAA---------GCG------------------GGT------TGG---------------------------------ATG------------------------------------------------------------------GATGCG------------------AAGATGGCG---TTTATCCCATCAATGGCAGCTTGGTTCTACATCATCTGGGAAATC---------------TTC------AGA---GGTGAAGCAAGCCAGATCAATGCTGGT------CTA---GCCAATGCTAACGTC---CAA---AAA---GCC---TAT---AAG---ACTATG---ACTCTGTTGGTCACTGTC---------------------------------------------------------------GGTTGG---------TCAATCTACCCATTGGGTTACTTCTTCGGCTACTTT---------------------------------------ATGGGCAGCCAAGATCCAGTTATGCTGAACGTTATCTATAACGTAGCTGACTTCTGGAACAAGATTGCCTTCGGTGTCGTTATCTGGGCAGCAGCAGTAGCTGAT---TCAAAG--------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------MALVAATAFFFVERDRVAG-KWKTSLTVSGLVTLIAAVHYFYMRDVWV-----------------ATGTSPTVFRYIDW--------LLTVPLLMIEFYLILSA---V-TKVPA-GV------------FWR-LLIGTIAMLGFGYAGE---A------G--W-----------M----------------------DA------KMA-FIPSMAAWFYIIWEI-----F--R-GEASQINAG--L-ANANV-Q-K-A-Y-K-TM-TLLVTV---------------------GW---SIYPLGYFFGYF-------------MGSQDPVMLNVIYNVADFWNKIAFGVVIWAAAVAD-SK--------------------------------------- [I-Gamma2-SAR92]_EF182735 [I-Gamma2-SAR92] HTCC6124_Gammaproteobacteria_EF182735 gi|141534096|gb|EF182735| Gamma proteobacterium HTCC6124 proteorhodopsin gene, partial cds Gamma proteobacterium HTCC6124 proteorhodopsin gene, partial cds EF182735 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Gammaproteobacteria] taxon:435701 genomic_DNA strain 10APR2007 #na #na Pacific Ocean marine 44.65167 -124.277 The SAR92 clade: an abundant coastal clade of culturable marine bacteria possessing proteorhodopsin Stingl,U., Desiderio,R.A., Cho,J.C., Vergin,K.L. and Giovannoni,S.J. Appl. Environ. Microbiol. 73 (7), 22902296 (2007) 17293499 #na TACTTCTTCATTGAACGCGATCGTGTTGCGGGCAAGTGGAAGACTTCTCTGACAGTATCTGGTTTGGTTACTCTGATCGCTGCAGTGCACTATTTCTATATGCGCGATGTCTGGGTATCAACTGGCACTTCTCCAACTGTATTCCGCTATATCGATTGGTTACTCACTGTGCCATTGCTGATGATCGAGTTTTACTTGATTCTGTCTGCCGTGACTAAAGTACCAGCCGGTGTTTTCTGGCGCTTACTGATCGGTTCAATCGCTATGCTTGGCTTCGGCTATGCTGGTGAAGCTGGTTGGATGGATGCGAAGATGGCGTTTATCCCATCAATGGCAGCTTGGTTCTACATCATCTGGGAAATCTTCAAAGGTGAAGCAAGCCAGATCAATGCTGGTCTAGCCAATGCTAACGTCCAAAAAGCCTATAAGACTATGACTCTGTTAGTCACTGTCGGTTGGTCAATCTACCCATTGGGTTACTTCTTCGGTTACTTCATGGGTACCCAAGATCCAGTTATGCTGAACGTTATCTATAACGTAGCTGACTTCTGGAACAAGATTGCCTTCGGTGTAGTTATCTGGGCAGCAGCAGTAGCTGATTCA YFFIERDRVAGKWKTSLTVSGLVTLIAAVHYFYMRDVWVSTGTSPTVFRYIDWLLTVPLLMIEFYLILSAVTKVPAGVFWRLLIGSIAMLGFGYAGEAGWMDAKMAFIPSMAAWFYIIWEIFKGEASQINAGLANANVQKAYKTMTLLVTVGWSIYPLGYFFGYFMGTQDPVMLNVIYNVADFWNKIAFGVVIWAAAVADS ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACTTCTTCATTGAACGCGATCGTGTTGCGGGC---AAGTGGAAGACTTCTCTGACAGTATCTGGTTTGGTTACTCTGATCGCTGCAGTGCACTATTTCTATATGCGCGATGTCTGGGTA---------------------------------------------------TCAACTGGCACTTCTCCAACTGTATTCCGCTATATCGATTGG------------------------TTACTCACTGTGCCATTGCTGATGATCGAGTTTTACTTGATTCTGTCTGCC---------GTG---ACTAAAGTACCAGCC---GGTGTT------------------------------------TTCTGGCGC---TTACTGATCGGTTCAATCGCTATGCTTGGCTTCGGCTATGCTGGTGAA---------GCT------------------GGT------TGG---------------------------------ATG------------------------------------------------------------------GATGCG------------------AAGATGGCG---TTTATCCCATCAATGGCAGCTTGGTTCTACATCATCTGGGAAATC---------------TTC------AAA---GGTGAAGCAAGCCAGATCAATGCTGGT------CTA---GCCAATGCTAACGTC---CAA---AAA---GCC---TAT---AAG---ACTATG---ACTCTGTTAGTCACTGTC---------------------------------------------------------------GGTTGG---------TCAATCTACCCATTGGGTTACTTCTTCGGTTACTTC---------------------------------------ATGGGTACCCAAGATCCAGTTATGCTGAACGTTATCTATAACGTAGCTGACTTCTGGAACAAGATTGCCTTCGGTGTAGTTATCTGGGCAGCAGCAGTAGCTGAT---TCA------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------YFFIERDRVAG-KWKTSLTVSGLVTLIAAVHYFYMRDVWV-----------------STGTSPTVFRYIDW--------LLTVPLLMIEFYLILSA---V-TKVPA-GV------------FWR-LLIGSIAMLGFGYAGE---A------G--W-----------M----------------------DA------KMA-FIPSMAAWFYIIWEI-----F--K-GEASQINAG--L-ANANV-Q-K-A-Y-K-TM-TLLVTV---------------------GW---SIYPLGYFFGYF-------------MGTQDPVMLNVIYNVADFWNKIAFGVVIWAAAVAD-S---------------------------------------- [I-Gamma2-SAR92]_EF182734 [I-Gamma2-SAR92] HTCC6245_Gammaproteobacteria_EF182734 gi|141534094|gb|EF182734| Gamma proteobacterium HTCC6245 proteorhodopsin gene, partial cds Gamma proteobacterium HTCC6245 proteorhodopsin gene, partial cds EF182734 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Gammaproteobacteria] taxon:435703 genomic_DNA strain 10APR2007 #na #na Pacific Ocean marine 44.65167 -124.277 The SAR92 clade: an abundant coastal clade of culturable marine bacteria possessing proteorhodopsin Stingl,U., Desiderio,R.A., Cho,J.C., Vergin,K.L. and Giovannoni,S.J. Appl. Environ. Microbiol. 73 (7), 22902296 (2007) 17293499 #na ACAGCATTCTTCTTTATTGAGCGCGATCGTGTCGCGGGCAAGTGGAAGACTTCTCTGACAGTATCTGGTTTGGTTACTCTGATCGCTGCAGTGCACTATTTCTATATGCGCGATGTATGGGTATCAACTGGTACTTCTCCAACAGTCTTCCGCTATATCGATTGGTTGCTGACTGTGCCATTGTTGATGATCGAGTTTTACTTGATTCTGTCTGCAGTGACTAAAGTACCAGCCGGTGTTTTCTGGCGCTTACTGATCGGTTCAATCGCTATGCTTGGCTTCGGCTATGCTGGTGAAGCTGGTTGGATGGATGCGAAGATGGCCTTTATCCCATCAATGGCAGCTTGGTTCTACATCATCTGGGAAATCTTCAAAGGTGAAGCGAGCCAGATCAATGCTGGTCTAGCCAATGCTAACGTCCAAAAAGCCTATAAGACTATGACTCTGTTGGTCACTGTCGGTTGGTCAATCTACCCATTGGGTTACTTCTTCGGCTACTTTATGGGAAGCCAAGATCCAGTTATGCTGAACGTTATTTATAACGTAGCTGACTTCTGGAACAAGATTGCCTTCGGTGTCGTTATCTGGGCAGCA TAFFFIERDRVAGKWKTSLTVSGLVTLIAAVHYFYMRDVWVSTGTSPTVFRYIDWLLTVPLLMIEFYLILSAVTKVPAGVFWRLLIGSIAMLGFGYAGEAGWMDAKMAFIPSMAAWFYIIWEIFKGEASQINAGLANANVQKAYKTMTLLVTVGWSIYPLGYFFGYFMGSQDPVMLNVIYNVADFWNKIAFGVVIWAA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGCATTCTTCTTTATTGAGCGCGATCGTGTCGCGGGC---AAGTGGAAGACTTCTCTGACAGTATCTGGTTTGGTTACTCTGATCGCTGCAGTGCACTATTTCTATATGCGCGATGTATGGGTA---------------------------------------------------TCAACTGGTACTTCTCCAACAGTCTTCCGCTATATCGATTGG------------------------TTGCTGACTGTGCCATTGTTGATGATCGAGTTTTACTTGATTCTGTCTGCA---------GTG---ACTAAAGTACCAGCC---GGTGTT------------------------------------TTCTGGCGC---TTACTGATCGGTTCAATCGCTATGCTTGGCTTCGGCTATGCTGGTGAA---------GCT------------------GGT------TGG---------------------------------ATG------------------------------------------------------------------GATGCG------------------AAGATGGCC---TTTATCCCATCAATGGCAGCTTGGTTCTACATCATCTGGGAAATC---------------TTC------AAA---GGTGAAGCGAGCCAGATCAATGCTGGT------CTA---GCCAATGCTAACGTC---CAA---AAA---GCC---TAT---AAG---ACTATG---ACTCTGTTGGTCACTGTC---------------------------------------------------------------GGTTGG---------TCAATCTACCCATTGGGTTACTTCTTCGGCTACTTT---------------------------------------ATGGGAAGCCAAGATCCAGTTATGCTGAACGTTATTTATAACGTAGCTGACTTCTGGAACAAGATTGCCTTCGGTGTCGTTATCTGGGCAGCA------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------TAFFFIERDRVAG-KWKTSLTVSGLVTLIAAVHYFYMRDVWV-----------------STGTSPTVFRYIDW--------LLTVPLLMIEFYLILSA---V-TKVPA-GV------------FWR-LLIGSIAMLGFGYAGE---A------G--W-----------M----------------------DA------KMA-FIPSMAAWFYIIWEI-----F--K-GEASQINAG--L-ANANV-Q-K-A-Y-K-TM-TLLVTV---------------------GW---SIYPLGYFFGYF-------------MGSQDPVMLNVIYNVADFWNKIAFGVVIWAA---------------------------------------------- [I-Gamma2-SAR92]_AZIN01000001 [I-Gamma2-SAR92] MOLA455_genome_AZIN01000001 gi|568787726|gb|AZIN01000001| Gammaproteobacteria bacterium MOLA455 MOLA455 Contig1, whole genome shotgun sequence Gammaproteobacteria bacterium MOLA455 MOLA455 Contig1, whole genome shotgun sequence AZIN01000001 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Gammaproteobacteria] taxon:1411685 genomic_DNA strain 26DEC2013 01-janv-03 mediterranean_seawater Mediterranean Sea marine 42.488333 3.145 Direct Submission Riedel,T. and Jarek,M. Submitted (09DEC2013) Observatoire Oceanologique de BanyulssurMer, Avenue du Fontaule, BanyulssurMer 66650, France #na #na ATGACAAACAACTTATCCGCTAGCGATCCCGTTGGCATTTCCTTTTGGCTAATATCCATGGCGTTGGTTGCTGCCACAGCATTCTTCTTCATTGAACGCGATCGTGTCGCGGGCAAGTGGAAGACTTCTCTGACAGTCTCCGGTTTGGTTACTCTGATCGCTGCAGTACACTATTTCTACATGCGCGATGTATGGGTAGCAACTGGTACTTCTCCAACTGAGTTCCGATATATCGATTGGTTATTGACTGTGCCACTGCTGATGATCGAGTTTTACTTGATTCTGTCTGCAGTGACTAAAGTACCAGCTGGTGTTTTCTGGCGTTTGCTGATCGGTTCAGTCGCTATGCTTGGCTTCGGCTATGCTGGTGAAGCTGGTTTGATGGACGCGAAGATGGCATTTATCCCATCAATGGCGGCTTGGTTCTACATCATCTGGGAAATCTTTAAAGGTGAAGCGAGCCAGATCAATGCTAGTCTAGCTAACGCTAACGTTCAGAAAGCCTACAAGACTATGACTCTGTTAGTCACTGTCGGTTGGTCAATCTACCCATTGGGTTACTTCTTCGGCTACTTCATGGGCAGCCAAGATCCAGTTCTGCTGAACGTTATTTATAACGTAGCTGACTTCTGGAACAAGATTGCCTTCGGTGTCGTTATCTGGGCAGCAGCAGTAGCTGATTCGGAG MTNNLSASDPVGISFWLISMALVAATAFFFIERDRVAGKWKTSLTVSGLVTLIAAVHYFYMRDVWVATGTSPTEFRYIDWLLTVPLLMIEFYLILSAVTKVPAGVFWRLLIGSVAMLGFGYAGEAGLMDAKMAFIPSMAAWFYIIWEIFKGEASQINASLANANVQKAYKTMTLLVTVGWSIYPLGYFFGYFMGSQDPVLLNVIYNVADFWNKIAFGVVIWAAAVADSE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGACAAACAACTTATCCGCTAGCGATCCCGTTGGCATTTCCTTTTGGCTAATATCCATGGCGTTGGTTGCTGCCACAGCATTCTTCTTCATTGAACGCGATCGTGTCGCGGGC---AAGTGGAAGACTTCTCTGACAGTCTCCGGTTTGGTTACTCTGATCGCTGCAGTACACTATTTCTACATGCGCGATGTATGGGTA---------------------------------------------------GCAACTGGTACTTCTCCAACTGAGTTCCGATATATCGATTGG------------------------TTATTGACTGTGCCACTGCTGATGATCGAGTTTTACTTGATTCTGTCTGCA---------GTG---ACTAAAGTACCAGCT---GGTGTT------------------------------------TTCTGGCGT---TTGCTGATCGGTTCAGTCGCTATGCTTGGCTTCGGCTATGCTGGTGAA---------GCT------------------GGT------TTG---------------------------------ATG------------------------------------------------------------------GACGCG------------------AAGATGGCA---TTTATCCCATCAATGGCGGCTTGGTTCTACATCATCTGGGAAATC---------------TTT------AAA---GGTGAAGCGAGCCAGATCAATGCTAGT------CTA---GCTAACGCTAACGTT---CAG---AAA---GCC---TAC---AAG---ACTATG---ACTCTGTTAGTCACTGTC---------------------------------------------------------------GGTTGG---------TCAATCTACCCATTGGGTTACTTCTTCGGCTACTTC---------------------------------------ATGGGCAGCCAAGATCCAGTTCTGCTGAACGTTATTTATAACGTAGCTGACTTCTGGAACAAGATTGCCTTCGGTGTCGTTATCTGGGCAGCAGCAGTAGCTGAT---TCGGAG--------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------MTNNLSASDPVGISFWLISMALVAATAFFFIERDRVAG-KWKTSLTVSGLVTLIAAVHYFYMRDVWV-----------------ATGTSPTEFRYIDW--------LLTVPLLMIEFYLILSA---V-TKVPA-GV------------FWR-LLIGSVAMLGFGYAGE---A------G--L-----------M----------------------DA------KMA-FIPSMAAWFYIIWEI-----F--K-GEASQINAS--L-ANANV-Q-K-A-Y-K-TM-TLLVTV---------------------GW---SIYPLGYFFGYF-------------MGSQDPVLLNVIYNVADFWNKIAFGVVIWAAAVAD-SE--------------------------------------- [I-Gamma2-c]_JX863157 [I-Gamma2-c] MALINA_OTU09_332_L_env_samples_JX863157 gi|425477264|gb|JX863157| Uncultured bacterium clone MALINA OTU09 332 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU09 332 L putative proteorhodopsin gene, partial cds JX863157 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/C subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 11-juil-09 0m_depth Arctic Ocean marine 67.49 -168.12 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTACTAACGGTTCCACTGTTGATCATAGAATTCTACCTGATTCTGTCTGCGATCACTAAAACGCCCGTCGGTGTGTTTTGGCGTTTGCTGATCGGTTCTCTCGTCATGCTGGGCTTTGGATTTGCCGGCGAAGCGGGCGCGATGGACGTGAGTTTGGCGTTTTGGATTGCAATGGCGGCTTGGGTCTTCATTATGTGGGAAATCTTTTTCGGTCAAGCGAGCAAGATCAACGCTGGCAGCGGAAACGCCAATGTGCAGAAAGCCTATAAGGCGATGGCATTGCTGGTGACGATA WLLTVPLLIIEFYLILSAITKTPVGVFWRLLIGSLVMLGFGFAGEAGAMDVSLAFWIAMAAWVFIMWEIFFGQASKINAGSGNANVQKAYKAMALLVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTACTAACGGTTCCACTGTTGATCATAGAATTCTACCTGATTCTGTCTGCG---------ATC---ACTAAAACGCCCGTC---GGTGTG------------------------------------TTTTGGCGT---TTGCTGATCGGTTCTCTCGTCATGCTGGGCTTTGGATTTGCCGGCGAA---------GCG------------------GGC------GCG---------------------------------ATG------------------------------------------------------------------GACGTG------------------AGTTTGGCG---TTTTGGATTGCAATGGCGGCTTGGGTCTTCATTATGTGGGAAATC---------------TTT------TTC---GGTCAAGCGAGCAAGATCAACGCTGGC------AGC---GGAAACGCCAATGTG---CAG---AAA---GCC---TAT---AAG---GCGATG---GCATTGCTGGTGACGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLIIEFYLILSA---I-TKTPV-GV------------FWR-LLIGSLVMLGFGFAGE---A------G--A-----------M----------------------DV------SLA-FWIAMAAWVFIMWEI-----F--F-GQASKINAG--S-GNANV-Q-K-A-Y-K-AM-ALLVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-c]_JX863156 [I-Gamma2-c] MALINA_OTU09_065_L_env_samples_JX863156 gi|425477262|gb|JX863156| Uncultured bacterium clone MALINA OTU09 065 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU09 065 L putative proteorhodopsin gene, partial cds JX863156 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/C subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 08Aug2009 70m_depth Arctic Ocean marine 70.8 -133.73 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTACTAACGGTTCCACTGTTAATCATCGAATTCTACCTGATTCTGTCTGCGATCACTAAAACGCCCGTCGGTGTGTTTTGGCGTTTGCTGATCGGTTCTCTCGTCATGCTGGGCTTTGGATTTGCCGGCGAAGCGGGCGCGATGGACGTGAGTTTGGCATTTTGGATTGCAATGGCGGCTTGGGTCTTCATTATGTGGGAGATCTTTTTCGGTCAAGCGAGCAAGGTCAACGCTGGCAGCGGAAACGCCAATGTGCAGAAGGCCTATAAGGCGATGGCATTGCTGGTGACGATA WLLTVPLLIIEFYLILSAITKTPVGVFWRLLIGSLVMLGFGFAGEAGAMDVSLAFWIAMAAWVFIMWEIFFGQASKVNAGSGNANVQKAYKAMALLVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTACTAACGGTTCCACTGTTAATCATCGAATTCTACCTGATTCTGTCTGCG---------ATC---ACTAAAACGCCCGTC---GGTGTG------------------------------------TTTTGGCGT---TTGCTGATCGGTTCTCTCGTCATGCTGGGCTTTGGATTTGCCGGCGAA---------GCG------------------GGC------GCG---------------------------------ATG------------------------------------------------------------------GACGTG------------------AGTTTGGCA---TTTTGGATTGCAATGGCGGCTTGGGTCTTCATTATGTGGGAGATC---------------TTT------TTC---GGTCAAGCGAGCAAGGTCAACGCTGGC------AGC---GGAAACGCCAATGTG---CAG---AAG---GCC---TAT---AAG---GCGATG---GCATTGCTGGTGACGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLIIEFYLILSA---I-TKTPV-GV------------FWR-LLIGSLVMLGFGFAGE---A------G--A-----------M----------------------DV------SLA-FWIAMAAWVFIMWEI-----F--F-GQASKVNAG--S-GNANV-Q-K-A-Y-K-AM-ALLVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-c]_JX863159 [I-Gamma2-c] MALINA_OTU09_301_L_env_samples_JX863159 gi|425477268|gb|JX863159| Uncultured bacterium clone MALINA OTU09 301 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU09 301 L putative proteorhodopsin gene, partial cds JX863159 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/C subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 11-juil-09 0m_depth Arctic Ocean marine 67.49 -168.12 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTGCTAACGGTTCCACTGCTGATCATAGAGTTCTACTTGATTCTCTCTGCGATCACTAAAACGCCCGTCGGGGTGTTCTGGCGTTTGCTCATCGGGTCTCTCGTCATGCTGGGCTTTGGATTTGCCGGCGAAGCGGGCGCGATGGACGTGGGTTGGGCGTTTTGGATTGCAATGGCGGCTTGGGTCTTCATTATGTGGGAGATCTTTTTTGGTCAAGCGAGCAAAATCAACGCTGGTAGCGGCAATGCTAATGTTCAAAAGGCCTATAAGGCGATGGCACTGCTGGTGACGATA WLLTVPLLIIEFYLILSAITKTPVGVFWRLLIGSLVMLGFGFAGEAGAMDVGWAFWIAMAAWVFIMWEIFFGQASKINAGSGNANVQKAYKAMALLVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGCTAACGGTTCCACTGCTGATCATAGAGTTCTACTTGATTCTCTCTGCG---------ATC---ACTAAAACGCCCGTC---GGGGTG------------------------------------TTCTGGCGT---TTGCTCATCGGGTCTCTCGTCATGCTGGGCTTTGGATTTGCCGGCGAA---------GCG------------------GGC------GCG---------------------------------ATG------------------------------------------------------------------GACGTG------------------GGTTGGGCG---TTTTGGATTGCAATGGCGGCTTGGGTCTTCATTATGTGGGAGATC---------------TTT------TTT---GGTCAAGCGAGCAAAATCAACGCTGGT------AGC---GGCAATGCTAATGTT---CAA---AAG---GCC---TAT---AAG---GCGATG---GCACTGCTGGTGACGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLIIEFYLILSA---I-TKTPV-GV------------FWR-LLIGSLVMLGFGFAGE---A------G--A-----------M----------------------DV------GWA-FWIAMAAWVFIMWEI-----F--F-GQASKINAG--S-GNANV-Q-K-A-Y-K-AM-ALLVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-c]_JX863158 [I-Gamma2-c] MALINA_OTU09_198_L_env_samples_JX863158 gi|425477266|gb|JX863158| Uncultured bacterium clone MALINA OTU09 198 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU09 198 L putative proteorhodopsin gene, partial cds JX863158 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/C subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 02Aug2009 45m_depth Arctic Ocean marine 69.61 -138.23 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTACTCACGGTTCCACTACTCATCATAGAGTCTTACTTGATTCTTTCTGCAATCACTAAAACGCCCGTAGGTGTGTTCTGGCGTTTGCTGATCGGGTCTCTCGTAACGCTGGGCTTTGGATTTGCCGGCGAAGCGGGTGTGATGGACGTGAGTTTGGCGTTTTGGATTGCAATGGCGGCTTGGGTCTTCATTATGTGGGAGATCTTTTTTGGTCAAGCGAGCAAGATCAACGCTGGCAGCGGAAACGTCAATGTGCAGAAAGCTTATAAGGCGATGGCACTACTGGTGACGATA WLLTVPLLIIESYLILSAITKTPVGVFWRLLIGSLVTLGFGFAGEAGVMDVSLAFWIAMAAWVFIMWEIFFGQASKINAGSGNVNVQKAYKAMALLVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTACTCACGGTTCCACTACTCATCATAGAGTCTTACTTGATTCTTTCTGCA---------ATC---ACTAAAACGCCCGTA---GGTGTG------------------------------------TTCTGGCGT---TTGCTGATCGGGTCTCTCGTAACGCTGGGCTTTGGATTTGCCGGCGAA---------GCG------------------GGT------GTG---------------------------------ATG------------------------------------------------------------------GACGTG------------------AGTTTGGCG---TTTTGGATTGCAATGGCGGCTTGGGTCTTCATTATGTGGGAGATC---------------TTT------TTT---GGTCAAGCGAGCAAGATCAACGCTGGC------AGC---GGAAACGTCAATGTG---CAG---AAA---GCT---TAT---AAG---GCGATG---GCACTACTGGTGACGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLIIESYLILSA---I-TKTPV-GV------------FWR-LLIGSLVTLGFGFAGE---A------G--V-----------M----------------------DV------SLA-FWIAMAAWVFIMWEI-----F--F-GQASKINAG--S-GNVNV-Q-K-A-Y-K-AM-ALLVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-c]_JX863160 [I-Gamma2-c] MALINA_OTU09_478_L_env_samples_JX863160 gi|425477270|gb|JX863160| Uncultured bacterium clone MALINA OTU09 478 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU09 478 L putative proteorhodopsin gene, partial cds JX863160 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/C subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 13Aug2009 0m_depth Arctic Ocean marine 69.25 -137.2 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGTTACTCACGGTTCCACTACTCATCATAGAGTTTTACTTGATTCTTTCTGCAATCACTAAAACGCCCGTAGGTGTGTTCTGGCGTTTGCTGATCGGGTCTCTCGTAATGCTGGGCTTTGGATTTGCCGGCGAAGCGGGTGTGATGGACGTGAGTTTGGCGTTTTGGATTGCAATGGCGGCTTGGGTCTTCATTATGTGGGAGATCTTTTTTGGTCAAGCGAGCAAGATCAACGCTGGCAGCGGAAACGTCAATGTGCAGAAAGCTTATAAGGCGATGGCACTACTGGTGACGATA WLLTVPLLIIEFYLILSAITKTPVGVFWRLLIGSLVMLGFGFAGEAGVMDVSLAFWIAMAAWVFIMWEIFFGQASKINAGSGNVNVQKAYKAMALLVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTACTCACGGTTCCACTACTCATCATAGAGTTTTACTTGATTCTTTCTGCA---------ATC---ACTAAAACGCCCGTA---GGTGTG------------------------------------TTCTGGCGT---TTGCTGATCGGGTCTCTCGTAATGCTGGGCTTTGGATTTGCCGGCGAA---------GCG------------------GGT------GTG---------------------------------ATG------------------------------------------------------------------GACGTG------------------AGTTTGGCG---TTTTGGATTGCAATGGCGGCTTGGGTCTTCATTATGTGGGAGATC---------------TTT------TTT---GGTCAAGCGAGCAAGATCAACGCTGGC------AGC---GGAAACGTCAATGTG---CAG---AAA---GCT---TAT---AAG---GCGATG---GCACTACTGGTGACGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLIIEFYLILSA---I-TKTPV-GV------------FWR-LLIGSLVMLGFGFAGE---A------G--V-----------M----------------------DV------SLA-FWIAMAAWVFIMWEI-----F--F-GQASKINAG--S-GNVNV-Q-K-A-Y-K-AM-ALLVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-BD17]_FJ862921 [I-Gamma2-BD17] 11_env_samples_FJ862921 gi|226897386|gb|FJ862921| Uncultured bacterium clone 11 putative proteorhodopsin gene, partial cds Uncultured bacterium clone 11 putative proteorhodopsin gene, partial cds FJ862921 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/BD17 HTCC2143-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 BD17 HTCC2143-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 07-Dec-2009 #na coastal_seawater Atlantic Ocean marine 38.8489 -75.1076 Lightdependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTAGATTGGTTGCTCACTGTGCCGCTGTTGATTATTGAGTTCTACTTGATTCTTTCAGCGATTACTAAAGTGCCAATAGGCGTATTCCAACGCTTGCTTGCAGGTTCACGGATCATGCTGGTCGCTGGCTTTATGGGCGAAGCAGGCTACATGGATGTGACTTTGGGCTTCATTATTGGCATGGCCGGTTGGATATGGGTTCTGTATGAGATCTTTGCTGGTGAAGCTAGCCAGATCAACGCAGCCAGCGCCAATGCGATCTGTCAGAAGGCCTACAGTTCCATGAAGTGGTTAGTTTCGATTGGCTGGGCGATTTACGCTCGA VDWLLTVPLLIIEFYLILSAITKVPIGVFQRLLAGSRIMLVAGFMGEAGYMDVTLGFIIGMAGWIWVLYEIFAGEASQINAASANAICQKAYSSMKWLVSIGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGATTGG------------------------TTGCTCACTGTGCCGCTGTTGATTATTGAGTTCTACTTGATTCTTTCAGCG---------ATT---ACTAAAGTGCCAATA---GGCGTA------------------------------------TTCCAACGC---TTGCTTGCAGGTTCACGGATCATGCTGGTCGCTGGCTTTATGGGCGAA---------GCA------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GATGTG------------------ACTTTGGGC---TTCATTATTGGCATGGCCGGTTGGATATGGGTTCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTAGCCAGATCAACGCAGCC------AGC---GCCAATGCGATCTGT---CAG---AAG---GCC---TAC---AGT---TCCATG---AAGTGGTTAGTTTCGATT---------------------------------------------------------------GGCTGG---------GCGATTTACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LLTVPLLIIEFYLILSA---I-TKVPI-GV------------FQR-LLAGSRIMLVAGFMGE---A------G--Y-----------M----------------------DV------TLG-FIIGMAGWIWVLYEI-----F--A-GEASQINAA--S-ANAIC-Q-K-A-Y-S-SM-KWLVSI---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [I-Gamma2-BD17]_FJ862949 [I-Gamma2-BD17] clone_03_FJ862949 gi|226897298|gb|FJ862949| Uncultured bacterium clone 03 putative proteorhodopsin mRNA, partial cds. Uncultured bacterium clone 03 putative proteorhodopsin mRNA, partial cds. FJ862949 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/BD17 HTCC2143-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 BD17 HTCC2143-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 07-DEC-2009 #na coastal seawater Atlantic Ocean marine 38.8489 -75.1076 Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTTGATCGGTTGCTCACTGTGCCGCTGTTGATTATTGAGTTCTACTTGATTCTTTCAGCGATTACTAAAGTGCCAATAGGCGTATTCCAACGCTTGCTTGCAGGTTCACTGATCATGCTGGTCGCTGGCTTTATGGGCGAAGCAGGCTACATGGATGTGACTTTGGGCTTCATTATTGGCATGGCCGGTTGGATATGGGTTCTGTATGAGATCTTTGCTGGTGAAGCTAGACAGATCAACGCAGCCAGCGCCAATGCGATCTGTCAGAAGGCCTACAGTTCCATGAAGTGGTTAGTCTCGATTGGATGGGCGATTTACGCTCGA VDRLLTVPLLIIEFYLILSAITKVPIGVFQRLLAGSLIMLVAGFMGEAGYMDVTLGFIIGMAGWIWVLYEIFAGEARQINAASANAICQKAYSSMKWLVSIGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGATCGG------------------------TTGCTCACTGTGCCGCTGTTGATTATTGAGTTCTACTTGATTCTTTCAGCG---------ATT---ACTAAAGTGCCAATA---GGCGTA------------------------------------TTCCAACGC---TTGCTTGCAGGTTCACTGATCATGCTGGTCGCTGGCTTTATGGGCGAA---------GCA------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GATGTG------------------ACTTTGGGC---TTCATTATTGGCATGGCCGGTTGGATATGGGTTCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTAGACAGATCAACGCAGCC------AGC---GCCAATGCGATCTGT---CAG---AAG---GCC---TAC---AGT---TCCATG---AAGTGGTTAGTCTCGATT---------------------------------------------------------------GGATGG---------GCGATTTACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDR--------LLTVPLLIIEFYLILSA---I-TKVPI-GV------------FQR-LLAGSLIMLVAGFMGE---A------G--Y-----------M----------------------DV------TLG-FIIGMAGWIWVLYEI-----F--A-GEARQINAA--S-ANAIC-Q-K-A-Y-S-SM-KWLVSI---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [I-Gamma2-BD17]_FJ862973 [I-Gamma2-BD17] clone_32_FJ862973 gi|226897346|gb|FJ862973| Uncultured bacterium clone 32 putative proteorhodopsin mRNA, partial cds. Uncultured bacterium clone 32 putative proteorhodopsin mRNA, partial cds. FJ862973 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/BD17 HTCC2143-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 BD17 HTCC2143-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 07-DEC-2009 #na coastal seawater Atlantic Ocean marine 38.8489 -75.1076 Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTTGATTGGTTGCTCACTGTGCCGCTGTTGATTATTGAGTTCTACTTGATTCTTTCAGCGATTACTAAAGTGCCAATAGGCGTATTCCAACGCTTGCTTGCAGGTTCACTGATCATGCTGGTCGCTGGCTTTATGGGCGAAGCAGGCTACATGGATGTGACTTTGGGCTTCATTATTGGCATGGCCGGTTGGATATGGGTTCTGTATGAGATCTTTGCTGGTGAAGCTAGCCAGATCAACGCAGCCAGCGCCAATGCGATCTGTCAGAAGGCCTACAGTTCCATGAAGTGGTTAGTCTCGATTGGCTGGGCGATCTATGCTCGA VDWLLTVPLLIIEFYLILSAITKVPIGVFQRLLAGSLIMLVAGFMGEAGYMDVTLGFIIGMAGWIWVLYEIFAGEASQINAASANAICQKAYSSMKWLVSIGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGATTGG------------------------TTGCTCACTGTGCCGCTGTTGATTATTGAGTTCTACTTGATTCTTTCAGCG---------ATT---ACTAAAGTGCCAATA---GGCGTA------------------------------------TTCCAACGC---TTGCTTGCAGGTTCACTGATCATGCTGGTCGCTGGCTTTATGGGCGAA---------GCA------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GATGTG------------------ACTTTGGGC---TTCATTATTGGCATGGCCGGTTGGATATGGGTTCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTAGCCAGATCAACGCAGCC------AGC---GCCAATGCGATCTGT---CAG---AAG---GCC---TAC---AGT---TCCATG---AAGTGGTTAGTCTCGATT---------------------------------------------------------------GGCTGG---------GCGATCTATGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LLTVPLLIIEFYLILSA---I-TKVPI-GV------------FQR-LLAGSLIMLVAGFMGE---A------G--Y-----------M----------------------DV------TLG-FIIGMAGWIWVLYEI-----F--A-GEASQINAA--S-ANAIC-Q-K-A-Y-S-SM-KWLVSI---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [I-Gamma2-BD17]_FJ862980 [I-Gamma2-BD17] clone_41_FJ862980 gi|226897360|gb|FJ862980| Uncultured bacterium clone 41 putative proteorhodopsin mRNA, partial cds. Uncultured bacterium clone 41 putative proteorhodopsin mRNA, partial cds. FJ862980 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/BD17 HTCC2143-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 BD17 HTCC2143-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 07-DEC-2009 #na coastal seawater Atlantic Ocean marine 38.8489 -75.1076 Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTCGACTGGTTGCTCACTGTGCCGCTGTTGATTATTGAGTTCTACTTGATTCTTTCAGCGATTACTAAAGTGCCAATAGGCGTATTCCAACGCTTGCTTGCAGGTTCACTGATCATGCTGGTCGCTGGCTTTATGGGCGAAGCAGGCTACATGGATGTGACTTTGGGCTTCATTATTGGCATGGCCGGTTGGATATGGGTTCTGTATGAGATCTTTGCTGGTGAAGCTAGCCAGATCAACGCAGCCAGCGCCAATGCGATCTGTCAGAAGGCCTACAGTTCCATGAAGTGGTTAGTCTCGATTGGGTGGGCGATTTACGCTCGA VDWLLTVPLLIIEFYLILSAITKVPIGVFQRLLAGSLIMLVAGFMGEAGYMDVTLGFIIGMAGWIWVLYEIFAGEASQINAASANAICQKAYSSMKWLVSIGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCGACTGG------------------------TTGCTCACTGTGCCGCTGTTGATTATTGAGTTCTACTTGATTCTTTCAGCG---------ATT---ACTAAAGTGCCAATA---GGCGTA------------------------------------TTCCAACGC---TTGCTTGCAGGTTCACTGATCATGCTGGTCGCTGGCTTTATGGGCGAA---------GCA------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GATGTG------------------ACTTTGGGC---TTCATTATTGGCATGGCCGGTTGGATATGGGTTCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTAGCCAGATCAACGCAGCC------AGC---GCCAATGCGATCTGT---CAG---AAG---GCC---TAC---AGT---TCCATG---AAGTGGTTAGTCTCGATT---------------------------------------------------------------GGGTGG---------GCGATTTACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LLTVPLLIIEFYLILSA---I-TKVPI-GV------------FQR-LLAGSLIMLVAGFMGE---A------G--Y-----------M----------------------DV------TLG-FIIGMAGWIWVLYEI-----F--A-GEASQINAA--S-ANAIC-Q-K-A-Y-S-SM-KWLVSI---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [I-Gamma2-BD17]_FJ862984 [I-Gamma2-BD17] clone_46_FJ862984 gi|226897368|gb|FJ862984| Uncultured bacterium clone 46 putative proteorhodopsin mRNA, partial cds. Uncultured bacterium clone 46 putative proteorhodopsin mRNA, partial cds. FJ862984 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/BD17 HTCC2143-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 BD17 HTCC2143-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 07-DEC-2009 #na coastal seawater Atlantic Ocean marine 38.8489 -75.1076 Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTCGACTGGTTGCTCACTGTGCCGCTGTTGATTATTGAGTTCTACTTGATTCTTTCAGCGATTACTAAAGTGCCAATAGGCGTACTCCAACGCTTGCTTGCAGGTTCACTGATCATGCTGGTCGCTGGCTTTATGGGCGAAGCAGGCTACATGGATGTGACTTTGGGCTTCATTATTGGCATGGCCGGTTGGATATGGGTTCTGTATGAGATCTTTGCTGGTGAAGCTAGCCAGATCAACGCAGCCAGCGCCAATGCGATCTGTCAGAAGGCCTACAGTTCCATGAAGTGGTTAGTCTCGATTGGGTGGGCGATTTACGCTCGA VDWLLTVPLLIIEFYLILSAITKVPIGVLQRLLAGSLIMLVAGFMGEAGYMDVTLGFIIGMAGWIWVLYEIFAGEASQINAASANAICQKAYSSMKWLVSIGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCGACTGG------------------------TTGCTCACTGTGCCGCTGTTGATTATTGAGTTCTACTTGATTCTTTCAGCG---------ATT---ACTAAAGTGCCAATA---GGCGTA------------------------------------CTCCAACGC---TTGCTTGCAGGTTCACTGATCATGCTGGTCGCTGGCTTTATGGGCGAA---------GCA------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GATGTG------------------ACTTTGGGC---TTCATTATTGGCATGGCCGGTTGGATATGGGTTCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTAGCCAGATCAACGCAGCC------AGC---GCCAATGCGATCTGT---CAG---AAG---GCC---TAC---AGT---TCCATG---AAGTGGTTAGTCTCGATT---------------------------------------------------------------GGGTGG---------GCGATTTACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LLTVPLLIIEFYLILSA---I-TKVPI-GV------------LQR-LLAGSLIMLVAGFMGE---A------G--Y-----------M----------------------DV------TLG-FIIGMAGWIWVLYEI-----F--A-GEASQINAA--S-ANAIC-Q-K-A-Y-S-SM-KWLVSI---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [I-Gamma2-BD17]_FJ862925 [I-Gamma2-BD17] 15_env_samples_FJ862925 gi|226897394|gb|FJ862925| Uncultured bacterium clone 15 putative proteorhodopsin gene, partial cds Uncultured bacterium clone 15 putative proteorhodopsin gene, partial cds FJ862925 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/BD17 HTCC2143-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 BD17 HTCC2143-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 07-Dec-2009 #na coastal_seawater Atlantic Ocean marine 38.8489 -75.1076 Lightdependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTCGATTGGTTGCTCACTGTGCCGCTGTTGATTATTGAGTTCTACTTGATTCTTTCAGCGATTACTAAAGTGCCAATAGGCGTATTCCAACGCTTGCTTGCAGGTTCACGGATCATGCTGGTCGCTGGCTTTATGGGCGAAGCAGGCTACATGGATGTGACTTTGGGCTTCATTATTGGCATGGCCGGTTGGATATGGGTTCTGTATGAGATCTTTGCTGGTGAAGCTAGCCAGATCAACGCAGCCAGCGCCAATGCGATCTGTCAGAAGGCCTACAGTTCCATGAAGTGGTTAGTCTCGATTGGATGGGCCTTCTACGCTCGA VDWLLTVPLLIIEFYLILSAITKVPIGVFQRLLAGSRIMLVAGFMGEAGYMDVTLGFIIGMAGWIWVLYEIFAGEASQINAASANAICQKAYSSMKWLVSIGWAFYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCGATTGG------------------------TTGCTCACTGTGCCGCTGTTGATTATTGAGTTCTACTTGATTCTTTCAGCG---------ATT---ACTAAAGTGCCAATA---GGCGTA------------------------------------TTCCAACGC---TTGCTTGCAGGTTCACGGATCATGCTGGTCGCTGGCTTTATGGGCGAA---------GCA------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GATGTG------------------ACTTTGGGC---TTCATTATTGGCATGGCCGGTTGGATATGGGTTCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTAGCCAGATCAACGCAGCC------AGC---GCCAATGCGATCTGT---CAG---AAG---GCC---TAC---AGT---TCCATG---AAGTGGTTAGTCTCGATT---------------------------------------------------------------GGATGG---------GCCTTCTACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LLTVPLLIIEFYLILSA---I-TKVPI-GV------------FQR-LLAGSRIMLVAGFMGE---A------G--Y-----------M----------------------DV------TLG-FIIGMAGWIWVLYEI-----F--A-GEASQINAA--S-ANAIC-Q-K-A-Y-S-SM-KWLVSI---------------------GW---AFYAR------------------------------------------------------------------------------------------------- [I-Gamma2-BD17]_FJ862931 [I-Gamma2-BD17] 23_env_samples_FJ862931 gi|226897406|gb|FJ862931| Uncultured bacterium clone 23 putative proteorhodopsin gene, partial cds Uncultured bacterium clone 23 putative proteorhodopsin gene, partial cds FJ862931 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/BD17 HTCC2143-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 BD17 HTCC2143-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 07-Dec-2009 #na coastal_seawater Atlantic Ocean marine 38.8489 -75.1076 Lightdependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTCGATTGGTTGCTCACTGTGCCGCTGTTGATTATTGAGTTCTACTTGATTCTTTCAGCGATTACTAAAGTGCCAATAGGCGTATTCCAACGCTTGCTTGCAGGTTCACGGATCATGCTGGTCGCTGGCTTTATGGGCGAAGCAGGCTACATGGATGTGACTTTGGGCTTCATTATTGGCATGGCCGGTTGGATATGGGTTCTGTATGAGATCTTTGCTGGTGAAGCTAGCCAGATCAACGCAGCCAGCGCCAATGCGATCTGTCAGAAGGCCTACAGTTCCATGAAGTGGTTAGTCTCGATTGGATGGGCCATCTACGCTCGA VDWLLTVPLLIIEFYLILSAITKVPIGVFQRLLAGSRIMLVAGFMGEAGYMDVTLGFIIGMAGWIWVLYEIFAGEASQINAASANAICQKAYSSMKWLVSIGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCGATTGG------------------------TTGCTCACTGTGCCGCTGTTGATTATTGAGTTCTACTTGATTCTTTCAGCG---------ATT---ACTAAAGTGCCAATA---GGCGTA------------------------------------TTCCAACGC---TTGCTTGCAGGTTCACGGATCATGCTGGTCGCTGGCTTTATGGGCGAA---------GCA------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GATGTG------------------ACTTTGGGC---TTCATTATTGGCATGGCCGGTTGGATATGGGTTCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTAGCCAGATCAACGCAGCC------AGC---GCCAATGCGATCTGT---CAG---AAG---GCC---TAC---AGT---TCCATG---AAGTGGTTAGTCTCGATT---------------------------------------------------------------GGATGG---------GCCATCTACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LLTVPLLIIEFYLILSA---I-TKVPI-GV------------FQR-LLAGSRIMLVAGFMGE---A------G--Y-----------M----------------------DV------TLG-FIIGMAGWIWVLYEI-----F--A-GEASQINAA--S-ANAIC-Q-K-A-Y-S-SM-KWLVSI---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [I-Gamma2-BD17]_FJ862920 [I-Gamma2-BD17] 09_env_samples_FJ862920 gi|226897384|gb|FJ862920| Uncultured bacterium clone 09 putative proteorhodopsin gene, partial cds Uncultured bacterium clone 09 putative proteorhodopsin gene, partial cds FJ862920 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/BD17 HTCC2143-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 BD17 HTCC2143-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 07-Dec-2009 #na coastal_seawater Atlantic Ocean marine 38.8489 -75.1076 Lightdependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na ATAGATTGGTTGCTCACTGTGCCGCTGTTGATTATTGAGTTCTACTTGATTCTTTCAGCGATTACTAAAGTGCCAATAGGCGTATTCCAACGCTTGCTTGCAGGTTCACTGATCATGCTGGTCGCTGGCTTTATGGGCGAAGCAGGCTACATGGATGTGACTTTGGGCTTCATTATTGGCATGGCCGGTTGGATATGGGTTCTGTATGAGATCTTTGCTGGTGAAGCTAGCCAGATCAACGCAGCCAGCGCCAATGCGATCTGTCAGAAGGCCTACAGTTCCATGAAGTGGTTAGTCTCGATTGGGTGGGCCATATACGCTCGA IDWLLTVPLLIIEFYLILSAITKVPIGVFQRLLAGSLIMLVAGFMGEAGYMDVTLGFIIGMAGWIWVLYEIFAGEASQINAASANAICQKAYSSMKWLVSIGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAGATTGG------------------------TTGCTCACTGTGCCGCTGTTGATTATTGAGTTCTACTTGATTCTTTCAGCG---------ATT---ACTAAAGTGCCAATA---GGCGTA------------------------------------TTCCAACGC---TTGCTTGCAGGTTCACTGATCATGCTGGTCGCTGGCTTTATGGGCGAA---------GCA------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GATGTG------------------ACTTTGGGC---TTCATTATTGGCATGGCCGGTTGGATATGGGTTCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTAGCCAGATCAACGCAGCC------AGC---GCCAATGCGATCTGT---CAG---AAG---GCC---TAC---AGT---TCCATG---AAGTGGTTAGTCTCGATT---------------------------------------------------------------GGGTGG---------GCCATATACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDW--------LLTVPLLIIEFYLILSA---I-TKVPI-GV------------FQR-LLAGSLIMLVAGFMGE---A------G--Y-----------M----------------------DV------TLG-FIIGMAGWIWVLYEI-----F--A-GEASQINAA--S-ANAIC-Q-K-A-Y-S-SM-KWLVSI---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [I-Gamma2-BD17]_FJ862923 [I-Gamma2-BD17] 13_env_samples_FJ862923 gi|226897390|gb|FJ862923| Uncultured bacterium clone 13 putative proteorhodopsin gene, partial cds Uncultured bacterium clone 13 putative proteorhodopsin gene, partial cds FJ862923 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/BD17 HTCC2143-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 BD17 HTCC2143-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 07-Dec-2009 #na coastal_seawater Atlantic Ocean marine 38.8489 -75.1076 Lightdependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na ATAGATTGGTTGCTCACTGTGCCGCTGTTGATTATTGAGTTCTACTTGATTCTTTCAGCGATTACTAAAGTGCCAATAGGCGTATTCCAACGCTTGCTTGCAGGTTCACTGATCATGCTGGTCGCTGGCTTTATGGGCGAAGCAGGCTACATGGATGTGACTTTGGGCTTCATTATTGGCATGGCCGGTTGGATATGGGTTCTGTATGAGATCTTTGCTGGTGAAGCTAGCCAGATCAACGCAGCCAGCGCCAATGCGATCTGTCAGAAGGCCTACAGTTCCATGAAGTGGTTAGTCTCGATTGGGTGGGCCATATACGCTCGA IDWLLTVPLLIIEFYLILSAITKVPIGVFQRLLAGSLIMLVAGFMGEAGYMDVTLGFIIGMAGWIWVLYEIFAGEASQINAASANAICQKAYSSMKWLVSIGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAGATTGG------------------------TTGCTCACTGTGCCGCTGTTGATTATTGAGTTCTACTTGATTCTTTCAGCG---------ATT---ACTAAAGTGCCAATA---GGCGTA------------------------------------TTCCAACGC---TTGCTTGCAGGTTCACTGATCATGCTGGTCGCTGGCTTTATGGGCGAA---------GCA------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GATGTG------------------ACTTTGGGC---TTCATTATTGGCATGGCCGGTTGGATATGGGTTCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTAGCCAGATCAACGCAGCC------AGC---GCCAATGCGATCTGT---CAG---AAG---GCC---TAC---AGT---TCCATG---AAGTGGTTAGTCTCGATT---------------------------------------------------------------GGGTGG---------GCCATATACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDW--------LLTVPLLIIEFYLILSA---I-TKVPI-GV------------FQR-LLAGSLIMLVAGFMGE---A------G--Y-----------M----------------------DV------TLG-FIIGMAGWIWVLYEI-----F--A-GEASQINAA--S-ANAIC-Q-K-A-Y-S-SM-KWLVSI---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [I-Gamma2-BD17]_FJ862948 [I-Gamma2-BD17] clone_01_FJ862948 gi|226897296|gb|FJ862948| Uncultured bacterium clone 01 putative proteorhodopsin mRNA, partial cds. Uncultured bacterium clone 01 putative proteorhodopsin mRNA, partial cds. FJ862948 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/BD17 HTCC2143-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 BD17 HTCC2143-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 07-DEC-2009 #na coastal seawater Atlantic Ocean marine 38.8489 -75.1076 Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTAGATTGGTTGCTCACTGTGCCGCTGTTGATTATTGAGTTCTACTTGATTCTTTCAGCGATTACTAAAGTGCCAATAGGCGTATTCCAACGCTTGCTTGCAGGTTCACTGATCATGCTGGTCGCTGGCTTTATGGGCGAAGCAGGCTACATGGATGTGACTTGGGGCTTCATTATTGGCATGGCCGGTTGGATATGGGTTCTGTATGAGATCTTTGCTGGTGAAGCTAGCCAGATCAACGCAGCCAGCGCCAATGCGATCTGTCAGAAGGCCTACAGTTCCATGAAGTGGTTAGTCTCGATTGGGTGGGCTATCTATGCTCGA VDWLLTVPLLIIEFYLILSAITKVPIGVFQRLLAGSLIMLVAGFMGEAGYMDVTWGFIIGMAGWIWVLYEIFAGEASQINAASANAICQKAYSSMKWLVSIGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGATTGG------------------------TTGCTCACTGTGCCGCTGTTGATTATTGAGTTCTACTTGATTCTTTCAGCG---------ATT---ACTAAAGTGCCAATA---GGCGTA------------------------------------TTCCAACGC---TTGCTTGCAGGTTCACTGATCATGCTGGTCGCTGGCTTTATGGGCGAA---------GCA------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GATGTG------------------ACTTGGGGC---TTCATTATTGGCATGGCCGGTTGGATATGGGTTCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTAGCCAGATCAACGCAGCC------AGC---GCCAATGCGATCTGT---CAG---AAG---GCC---TAC---AGT---TCCATG---AAGTGGTTAGTCTCGATT---------------------------------------------------------------GGGTGG---------GCTATCTATGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LLTVPLLIIEFYLILSA---I-TKVPI-GV------------FQR-LLAGSLIMLVAGFMGE---A------G--Y-----------M----------------------DV------TWG-FIIGMAGWIWVLYEI-----F--A-GEASQINAA--S-ANAIC-Q-K-A-Y-S-SM-KWLVSI---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [I-Gamma2-BD17]_FJ862927 [I-Gamma2-BD17] 17_env_samples_FJ862927 gi|226897398|gb|FJ862927| Uncultured bacterium clone 17 putative proteorhodopsin gene, partial cds Uncultured bacterium clone 17 putative proteorhodopsin gene, partial cds FJ862927 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/BD17 HTCC2143-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 BD17 HTCC2143-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 07-Dec-2009 #na coastal_seawater Atlantic Ocean marine 38.8489 -75.1076 Lightdependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTAGACTGGTTGCTCACTGTGCCGCTGTTGATTATTGAGTTCTACTTGATTCTTTCAGCGATTACTAAAGTGCCAATAGGCGTATTCCAACGCTTGCTTGCAGGTTCACTGATCATGCTGGTCGCTGGCTTTATGGGCGAAGCAGGCTACATGGATGTGACTTTGGGCTTCATTATTGGCATGGCCGGTCGGATATGGGTTCTGTATGAGATCTTTGCTGGTGAAGCTAGCCAGATCAACGCAGCCAGCGCCAATGCGATCTGTCAGAAGGCCTACAGTTCCATGAAGTGGTTAGTCTCGATTGGGTGGGCTATCTACGCTCGA VDWLLTVPLLIIEFYLILSAITKVPIGVFQRLLAGSLIMLVAGFMGEAGYMDVTLGFIIGMAGRIWVLYEIFAGEASQINAASANAICQKAYSSMKWLVSIGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGACTGG------------------------TTGCTCACTGTGCCGCTGTTGATTATTGAGTTCTACTTGATTCTTTCAGCG---------ATT---ACTAAAGTGCCAATA---GGCGTA------------------------------------TTCCAACGC---TTGCTTGCAGGTTCACTGATCATGCTGGTCGCTGGCTTTATGGGCGAA---------GCA------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GATGTG------------------ACTTTGGGC---TTCATTATTGGCATGGCCGGTCGGATATGGGTTCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTAGCCAGATCAACGCAGCC------AGC---GCCAATGCGATCTGT---CAG---AAG---GCC---TAC---AGT---TCCATG---AAGTGGTTAGTCTCGATT---------------------------------------------------------------GGGTGG---------GCTATCTACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LLTVPLLIIEFYLILSA---I-TKVPI-GV------------FQR-LLAGSLIMLVAGFMGE---A------G--Y-----------M----------------------DV------TLG-FIIGMAGRIWVLYEI-----F--A-GEASQINAA--S-ANAIC-Q-K-A-Y-S-SM-KWLVSI---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [I-Gamma2-BD17]_FJ862938 [I-Gamma2-BD17] 33_env_samples_FJ862938 gi|226897420|gb|FJ862938| Uncultured bacterium clone 33 putative proteorhodopsin gene, partial cds Uncultured bacterium clone 33 putative proteorhodopsin gene, partial cds FJ862938 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/BD17 HTCC2143-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 BD17 HTCC2143-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 07-Dec-2009 #na coastal_seawater Atlantic Ocean marine 38.8489 -75.1076 Lightdependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTAGACTGGTTGCTCACTGTGCCGCTGTTGATTATTGAGTTCTACTTGATTCTTTCAGCAATTACTAAAGTGCCAATAGGCGTATTCCAACGCTTGCTTGCAGGTTCACTGATCATGCTGGTCGCTGGCTTTATGGGCGAAGCAGGCTACATGGATGTGACTTTGGGCTTCATTATTGGCATGGCCGGTTGGATATGGGTTCTGTATGAGATCTTTGCTGGTGAAGCTAGCCAGATCAACGCAGCCAGCGCCAATGCGATCTGTCAGAAGGCCTACAGTTCCATGAAGTGGTTAGTCTCGATTGGATGGGCCATTTACGCTCGA VDWLLTVPLLIIEFYLILSAITKVPIGVFQRLLAGSLIMLVAGFMGEAGYMDVTLGFIIGMAGWIWVLYEIFAGEASQINAASANAICQKAYSSMKWLVSIGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGACTGG------------------------TTGCTCACTGTGCCGCTGTTGATTATTGAGTTCTACTTGATTCTTTCAGCA---------ATT---ACTAAAGTGCCAATA---GGCGTA------------------------------------TTCCAACGC---TTGCTTGCAGGTTCACTGATCATGCTGGTCGCTGGCTTTATGGGCGAA---------GCA------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GATGTG------------------ACTTTGGGC---TTCATTATTGGCATGGCCGGTTGGATATGGGTTCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTAGCCAGATCAACGCAGCC------AGC---GCCAATGCGATCTGT---CAG---AAG---GCC---TAC---AGT---TCCATG---AAGTGGTTAGTCTCGATT---------------------------------------------------------------GGATGG---------GCCATTTACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LLTVPLLIIEFYLILSA---I-TKVPI-GV------------FQR-LLAGSLIMLVAGFMGE---A------G--Y-----------M----------------------DV------TLG-FIIGMAGWIWVLYEI-----F--A-GEASQINAA--S-ANAIC-Q-K-A-Y-S-SM-KWLVSI---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [I-Gamma2-BD17]_FJ862958 [I-Gamma2-BD17] clone_15_FJ862958 gi|226897316|gb|FJ862958| Uncultured bacterium clone 15 putative proteorhodopsin mRNA, partial cds. Uncultured bacterium clone 15 putative proteorhodopsin mRNA, partial cds. FJ862958 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/BD17 HTCC2143-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 BD17 HTCC2143-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) unknown (W105) [Bacteria/environmental samples] taxon:77133 mRNA other 07-DEC-2009 #na coastal seawater Atlantic Ocean marine 38.8489 -75.1076 Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTAGACTGGTTGCTCACTGTGCCGCTGTGGATTATTGAGTTCTACTTGATTCTTTCAGCGATTACTAAAGTGCCAATAGGCGTATTCCAACGCTTGCTTGCAGGTTCACTGATCATGCTGGTCGCTGGCTTTATGGGCGAAGCAGGCTACATGGATGTGACTTTGGGCTTCATTATTGGCATGGCCGGTTGGATATGGGTTCTGTATGAGATCTTTGCTGGTGAAGCTAGCCAGATCAACGCAGCCAGCGCCAATGCGATCTGTCAGAAGGCCTACAGTTCCATGAAGTGGTTAGTCTCGATTGGCTGGGCCATCTACGCTCGT VDWLLTVPLWIIEFYLILSAITKVPIGVFQRLLAGSLIMLVAGFMGEAGYMDVTLGFIIGMAGWIWVLYEIFAGEASQINAASANAICQKAYSSMKWLVSIGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGACTGG------------------------TTGCTCACTGTGCCGCTGTGGATTATTGAGTTCTACTTGATTCTTTCAGCG---------ATT---ACTAAAGTGCCAATA---GGCGTA------------------------------------TTCCAACGC---TTGCTTGCAGGTTCACTGATCATGCTGGTCGCTGGCTTTATGGGCGAA---------GCA------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GATGTG------------------ACTTTGGGC---TTCATTATTGGCATGGCCGGTTGGATATGGGTTCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTAGCCAGATCAACGCAGCC------AGC---GCCAATGCGATCTGT---CAG---AAG---GCC---TAC---AGT---TCCATG---AAGTGGTTAGTCTCGATT---------------------------------------------------------------GGCTGG---------GCCATCTACGCTCGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LLTVPLWIIEFYLILSA---I-TKVPI-GV------------FQR-LLAGSLIMLVAGFMGE---A------G--Y-----------M----------------------DV------TLG-FIIGMAGWIWVLYEI-----F--A-GEASQINAA--S-ANAIC-Q-K-A-Y-S-SM-KWLVSI---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [I-Gamma2-BD17]_FJ862957 [I-Gamma2-BD17] clone_14_FJ862957 gi|226897314|gb|FJ862957| Uncultured bacterium clone 14 putative proteorhodopsin mRNA, partial cds. Uncultured bacterium clone 14 putative proteorhodopsin mRNA, partial cds. FJ862957 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/BD17 HTCC2143-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 BD17 HTCC2143-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 07-DEC-2009 #na coastal seawater Atlantic Ocean marine 38.8489 -75.1076 Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTCGACTGGTTGCTCACTGTGCCGCTGTTGATTATTGAGTTCTACTTGATTCTTTCAGCGATTACTAAAGTGCCAATAGGCGTATTCCAACGCTTGCTTGCAGGTTCACTGATCATGCTGGTCGCTGGCTTTATGGGCGAAGCAGGCTACATGGATGTGACTTTGGGCTTCATTATTGGCATGGCCGGTTGGATATGGGTTCTGTATGAGATCTTTGCTGGTGAAGCTAGCCAGATCAACGCAGCCAGCGCCAATGCGATCTGTCAGAAGGCCTACAGTTCCATGAAGTGGTTAGTCTCGATTGGATGGGCCATATACGCTCGA VDWLLTVPLLIIEFYLILSAITKVPIGVFQRLLAGSLIMLVAGFMGEAGYMDVTLGFIIGMAGWIWVLYEIFAGEASQINAASANAICQKAYSSMKWLVSIGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCGACTGG------------------------TTGCTCACTGTGCCGCTGTTGATTATTGAGTTCTACTTGATTCTTTCAGCG---------ATT---ACTAAAGTGCCAATA---GGCGTA------------------------------------TTCCAACGC---TTGCTTGCAGGTTCACTGATCATGCTGGTCGCTGGCTTTATGGGCGAA---------GCA------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GATGTG------------------ACTTTGGGC---TTCATTATTGGCATGGCCGGTTGGATATGGGTTCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTAGCCAGATCAACGCAGCC------AGC---GCCAATGCGATCTGT---CAG---AAG---GCC---TAC---AGT---TCCATG---AAGTGGTTAGTCTCGATT---------------------------------------------------------------GGATGG---------GCCATATACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LLTVPLLIIEFYLILSA---I-TKVPI-GV------------FQR-LLAGSLIMLVAGFMGE---A------G--Y-----------M----------------------DV------TLG-FIIGMAGWIWVLYEI-----F--A-GEASQINAA--S-ANAIC-Q-K-A-Y-S-SM-KWLVSI---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [I-Gamma2-BD17]_FJ862981 [I-Gamma2-BD17] clone_42_FJ862981 gi|226897362|gb|FJ862981| Uncultured bacterium clone 42 putative proteorhodopsin mRNA, partial cds. Uncultured bacterium clone 42 putative proteorhodopsin mRNA, partial cds. FJ862981 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/BD17 HTCC2143-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 BD17 HTCC2143-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 07-DEC-2009 #na coastal seawater Atlantic Ocean marine 38.8489 -75.1076 Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTTGATTGGTTGCTCACTGTGCCGCTGTTGATTATTGAGTTCCACTTGATTCTTTCAGCGATTACTAAAGTACCAATAGGCGTATTCCAACGCTTGCTTGCAGGTTCACTGATCATGCTGGTCGCTGGCTTTATGGGCGAAGCAGGCTACATGGATGTGACTTTGGGCTTCATTGGCATGGCCGGTTGGATATGGGTTCTGTATGAGATCTTTGCTGGTGAAGCTAGCCAGATCAACGCAGCCAGCGCCAATGCGATCTGTCAGAAGGCCTACAGTTCCATGAAGTGGTTAGTCTCGATTGGATGGGCCATCTACGCTCGA VDWLLTVPLLIIEFHLILSAITKVPIGVFQRLLAGSLIMLVAGFMGEAGYMDVTLGFIGMAGWIWVLYEIFAGEASQINAASANAICQKAYSSMKWLVSIGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGATTGG------------------------TTGCTCACTGTGCCGCTGTTGATTATTGAGTTCCACTTGATTCTTTCAGCG---------ATT---ACTAAAGTACCAATA---GGCGTA------------------------------------TTCCAACGC---TTGCTTGCAGGTTCACTGATCATGCTGGTCGCTGGCTTTATGGGCGAA---------GCA------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GATGTG------------------ACTTTGGGC---TTC---ATTGGCATGGCCGGTTGGATATGGGTTCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTAGCCAGATCAACGCAGCC------AGC---GCCAATGCGATCTGT---CAG---AAG---GCC---TAC---AGT---TCCATG---AAGTGGTTAGTCTCGATT---------------------------------------------------------------GGATGG---------GCCATCTACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LLTVPLLIIEFHLILSA---I-TKVPI-GV------------FQR-LLAGSLIMLVAGFMGE---A------G--Y-----------M----------------------DV------TLG-F-IGMAGWIWVLYEI-----F--A-GEASQINAA--S-ANAIC-Q-K-A-Y-S-SM-KWLVSI---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [I-Gamma2-BD17]_FJ862929 [I-Gamma2-BD17] 20_env_samples_FJ862929 gi|226897402|gb|FJ862929| Uncultured bacterium clone 20 putative proteorhodopsin gene, partial cds Uncultured bacterium clone 20 putative proteorhodopsin gene, partial cds FJ862929 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/BD17 HTCC2143-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 BD17 HTCC2143-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 07-Dec-2009 #na coastal_seawater Atlantic Ocean marine 38.8489 -75.1076 Lightdependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTTGACTGGTTGCTCACTGTGCCGCTGTTGATTATTGAGTTCTACTTGATTCTTTCAGCGATTACTAAAGTGCCAATGGGCGTATTCCAACGCTTGCTTGCAGGTTCACTGATCATGCTGGTCGCTGGCTTTATGGGCGAAGCAGGCTACATGGATGTGACTCTGGGCTTCATCATCGGCATGGCCGGTTGGATATGGGTTCTGTATGAGATCTTTGCTGGTGAAGCTAGCCAGATCAACGCAGCCAGCGCCAATGCGATCTGTCAGAAGGCCTACAGTTCCATGAAGTGGTTAGTGTCGATTGGGTGGGCGATCTATGCTCGA VDWLLTVPLLIIEFYLILSAITKVPMGVFQRLLAGSLIMLVAGFMGEAGYMDVTLGFIIGMAGWIWVLYEIFAGEASQINAASANAICQKAYSSMKWLVSIGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGACTGG------------------------TTGCTCACTGTGCCGCTGTTGATTATTGAGTTCTACTTGATTCTTTCAGCG---------ATT---ACTAAAGTGCCAATG---GGCGTA------------------------------------TTCCAACGC---TTGCTTGCAGGTTCACTGATCATGCTGGTCGCTGGCTTTATGGGCGAA---------GCA------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GATGTG------------------ACTCTGGGC---TTCATCATCGGCATGGCCGGTTGGATATGGGTTCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTAGCCAGATCAACGCAGCC------AGC---GCCAATGCGATCTGT---CAG---AAG---GCC---TAC---AGT---TCCATG---AAGTGGTTAGTGTCGATT---------------------------------------------------------------GGGTGG---------GCGATCTATGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LLTVPLLIIEFYLILSA---I-TKVPM-GV------------FQR-LLAGSLIMLVAGFMGE---A------G--Y-----------M----------------------DV------TLG-FIIGMAGWIWVLYEI-----F--A-GEASQINAA--S-ANAIC-Q-K-A-Y-S-SM-KWLVSI---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [I-Gamma2-BD17]_FJ862934 [I-Gamma2-BD17] 27_env_samples_FJ862934 gi|226897412|gb|FJ862934| Uncultured bacterium clone 27 putative proteorhodopsin gene, partial cds Uncultured bacterium clone 27 putative proteorhodopsin gene, partial cds FJ862934 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/BD17 HTCC2143-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 BD17 HTCC2143-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 07-Dec-2009 #na coastal_seawater Atlantic Ocean marine 38.8489 -75.1076 Lightdependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTTGACTGGTTGCTCACTGTGCCGCTGTTGATTATTGAGTTCTACTTGATTCTTTCAGCGATTACTAAAGTGCCAATGGGCGTATTCCAACGCTTGCTTGCAGGTTCACTGATCATGCTGGTCGCTGGCTTTATGGGCGAAGCAGGCTACATGGATGTGACTCTGGGCTTCATCATCGGCATGGCCGGTTGGATATGGGTTCTGTATGAGATCTTTGCTGGTGAAGCTAGCCAGATCAACGCAGCCAGCGCCAATGCGATCTGTCAGAAGGCCTACAGTTCCATGAAGTGGTTAGTGTCGATTGGGTGGGCCATCTATGCTCGA VDWLLTVPLLIIEFYLILSAITKVPMGVFQRLLAGSLIMLVAGFMGEAGYMDVTLGFIIGMAGWIWVLYEIFAGEASQINAASANAICQKAYSSMKWLVSIGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGACTGG------------------------TTGCTCACTGTGCCGCTGTTGATTATTGAGTTCTACTTGATTCTTTCAGCG---------ATT---ACTAAAGTGCCAATG---GGCGTA------------------------------------TTCCAACGC---TTGCTTGCAGGTTCACTGATCATGCTGGTCGCTGGCTTTATGGGCGAA---------GCA------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GATGTG------------------ACTCTGGGC---TTCATCATCGGCATGGCCGGTTGGATATGGGTTCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTAGCCAGATCAACGCAGCC------AGC---GCCAATGCGATCTGT---CAG---AAG---GCC---TAC---AGT---TCCATG---AAGTGGTTAGTGTCGATT---------------------------------------------------------------GGGTGG---------GCCATCTATGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LLTVPLLIIEFYLILSA---I-TKVPM-GV------------FQR-LLAGSLIMLVAGFMGE---A------G--Y-----------M----------------------DV------TLG-FIIGMAGWIWVLYEI-----F--A-GEASQINAA--S-ANAIC-Q-K-A-Y-S-SM-KWLVSI---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [I-Gamma2-BD17]_FJ618949 [I-Gamma2-BD17] PR_108_08_05_env_samples_FJ618949 gi|223046781|gb|FJ618949| Uncultured bacterium clone PR 108 08 05 proteorhodopsin gene, partial cds Uncultured bacterium clone PR 108 08 05 proteorhodopsin gene, partial cds FJ618949 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/BD17 HTCC2143-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 BD17 HTCC2143-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-juil-09 #na Arctic_Ocean Arctic Ocean marine 71.37 -156.68 Photoheterotrophic microbes in the Arctic Ocean in summer and winter Cottrell,M.T. and Kirchman,D.L. Appl. Environ. Microbiol. 75 (15), 49584966 (2009) 19502441 #na TATATTGACTGGTTGCTCACTGTGCCGCTGTTGATTATTGAGTTCTACTTGATTCTTTCAGCGATTACTAAAGTGCCAATAGGCGTATTCCAACGCTTGCTTGCAGGTTCACTTATCATGCTGGTCGCTGGCTTTATGGGCGAAGCAGGCTACATGGATGTGACCCTGGGCTTCATCATCGGCATGGCCGGTTGGATATGGGTTCTGTATGAGATCTTTGCTGGTGAAGCTAGCCAGATCAACGCAGCCAGCGCCAATGCGATCTGTCAGAAGGCCTACAGTTCCATGAAGTGGTTAGTGTCGATTGGATGGGCCATTTAC YIDWLLTVPLLIIEFYLILSAITKVPIGVFQRLLAGSLIMLVAGFMGEAGYMDVTLGFIIGMAGWIWVLYEIFAGEASQINAASANAICQKAYSSMKWLVSIGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATTGACTGG------------------------TTGCTCACTGTGCCGCTGTTGATTATTGAGTTCTACTTGATTCTTTCAGCG---------ATT---ACTAAAGTGCCAATA---GGCGTA------------------------------------TTCCAACGC---TTGCTTGCAGGTTCACTTATCATGCTGGTCGCTGGCTTTATGGGCGAA---------GCA------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GATGTG------------------ACCCTGGGC---TTCATCATCGGCATGGCCGGTTGGATATGGGTTCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTAGCCAGATCAACGCAGCC------AGC---GCCAATGCGATCTGT---CAG---AAG---GCC---TAC---AGT---TCCATG---AAGTGGTTAGTGTCGATT---------------------------------------------------------------GGATGG---------GCCATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YIDW--------LLTVPLLIIEFYLILSA---I-TKVPI-GV------------FQR-LLAGSLIMLVAGFMGE---A------G--Y-----------M----------------------DV------TLG-FIIGMAGWIWVLYEI-----F--A-GEASQINAA--S-ANAIC-Q-K-A-Y-S-SM-KWLVSI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [I-Gamma2-BD17]_FJ618958 [I-Gamma2-BD17] PR_108_08_14_env_samples_FJ618958 gi|223046799|gb|FJ618958| Uncultured bacterium clone PR 108 08 14 proteorhodopsin gene, partial cds Uncultured bacterium clone PR 108 08 14 proteorhodopsin gene, partial cds FJ618958 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/BD17 HTCC2143-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 BD17 HTCC2143-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-juil-09 #na Arctic_Ocean Arctic Ocean marine 71.37 -156.68 Photoheterotrophic microbes in the Arctic Ocean in summer and winter Cottrell,M.T. and Kirchman,D.L. Appl. Environ. Microbiol. 75 (15), 49584966 (2009) 19502441 #na TACATCGATTGGTTGCTCACTGTGCCGCTGTTGATTATTGAGTTCTACTTGATTCTTTCAGCGATTACTAAAGTGCCAATAGGCGTATTCCAACGCTTGCTTGCAGGTTCACTGATCATGCTGGTCGCTGGCTTTATGGGCGAAGCAGGCTTCATGGATGTGACTTTGGGCTTCATTATCGGCATGGCCGGTTGGATATGGGTCCTGTATGAGATCTTTGCTGGTGAAGCTAGCCAGATCAACGCAGCCAGCGCCAATGCGATCTGTCAGAAGGCCTACAGTTCCATGAAGTGGTTAGTGTCGATTGGATGGGCAATCTAC YIDWLLTVPLLIIEFYLILSAITKVPIGVFQRLLAGSLIMLVAGFMGEAGFMDVTLGFIIGMAGWIWVLYEIFAGEASQINAASANAICQKAYSSMKWLVSIGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACATCGATTGG------------------------TTGCTCACTGTGCCGCTGTTGATTATTGAGTTCTACTTGATTCTTTCAGCG---------ATT---ACTAAAGTGCCAATA---GGCGTA------------------------------------TTCCAACGC---TTGCTTGCAGGTTCACTGATCATGCTGGTCGCTGGCTTTATGGGCGAA---------GCA------------------GGC------TTC---------------------------------ATG------------------------------------------------------------------GATGTG------------------ACTTTGGGC---TTCATTATCGGCATGGCCGGTTGGATATGGGTCCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTAGCCAGATCAACGCAGCC------AGC---GCCAATGCGATCTGT---CAG---AAG---GCC---TAC---AGT---TCCATG---AAGTGGTTAGTGTCGATT---------------------------------------------------------------GGATGG---------GCAATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YIDW--------LLTVPLLIIEFYLILSA---I-TKVPI-GV------------FQR-LLAGSLIMLVAGFMGE---A------G--F-----------M----------------------DV------TLG-FIIGMAGWIWVLYEI-----F--A-GEASQINAA--S-ANAIC-Q-K-A-Y-S-SM-KWLVSI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [I-Gamma2-BD17]_JX863239 [I-Gamma2-BD17] MALINA_OTU05_325_L_env_samples_JX863239 gi|425477428|gb|JX863239| Uncultured bacterium clone MALINA OTU05 325 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU05 325 L putative proteorhodopsin mRNA, partial cds JX863239 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/BD17 HTCC2143-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 BD17 HTCC2143-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 02Aug2009 40m_depth Arctic Ocean marine 69.61 -138.23 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGCTCACAGTGCCACTACTGATCATCGAATTCTATTTGATCCTATCTGCAATTACTAAAGTACCTGTCGGCGTTTTCTGGCGTCTACTAGCAGGCTCTTTGATTATGCTTGTTGCTGGTTTTGCTGGCGAAGTAAATCCTGATTACGTAGTCTCTGGCTTCGTTGTTGGTATGCTGGGTTGGATCTGGATCATGTATGAAATCTTTATGGGTGAGGCGAGCAAGATCAACGCTGCCAGTGGTAATGCCATTGCTCAGAAAGCTTACGGCGCCATGCGTATGCTGGTTACTGTT WLLTVPLLIIEFYLILSAITKVPVGVFWRLLAGSLIMLVAGFAGEVNPDYVVSGFVVGMLGWIWIMYEIFMGEASKINAASGNAIAQKAYGAMRMLVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGCTCACAGTGCCACTACTGATCATCGAATTCTATTTGATCCTATCTGCA---------ATT---ACTAAAGTACCTGTC---GGCGTT------------------------------------TTCTGGCGT---CTACTAGCAGGCTCTTTGATTATGCTTGTTGCTGGTTTTGCTGGCGAA---------GTA------------------AAT------CCT---------------------------------GAT------------------------------------------------------------------TACGTA------------------GTCTCTGGC---TTCGTTGTTGGTATGCTGGGTTGGATCTGGATCATGTATGAAATC---------------TTT------ATG---GGTGAGGCGAGCAAGATCAACGCTGCC------AGT---GGTAATGCCATTGCT---CAG---AAA---GCT---TAC---GGC---GCCATG---CGTATGCTGGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLIIEFYLILSA---I-TKVPV-GV------------FWR-LLAGSLIMLVAGFAGE---V------N--P-----------D----------------------YV------VSG-FVVGMLGWIWIMYEI-----F--M-GEASKINAA--S-GNAIA-Q-K-A-Y-G-AM-RMLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-BD17]_FJ618982 [I-Gamma2-BD17] PR_707_07_18_env_samples_FJ618982 gi|223046847|gb|FJ618982| Uncultured bacterium clone PR 707 07 18 proteorhodopsin gene, partial cds Uncultured bacterium clone PR 707 07 18 proteorhodopsin gene, partial cds FJ618982 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/BD17 HTCC2143-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 BD17 HTCC2143-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-juil-09 #na Arctic_Ocean Arctic Ocean marine 71.37 -156.68 Photoheterotrophic microbes in the Arctic Ocean in summer and winter Cottrell,M.T. and Kirchman,D.L. Appl. Environ. Microbiol. 75 (15), 49584966 (2009) 19502441 #na TATATTGACTGGCTGCTCACAGTGCCACTACTGATTATCGAATTCTATTTGATCCTATCTGCAATTACTAAAGTACCTGTCGGCGTTTTCTGGCGTTTACTAGCAGGCTCTTTGATTATGCTTGTTGCTGGTTTTGCTGGCGAAGTAAATCCTGATTACGTAGTCTCTGGCTTCGTTGTTGGTATGCTGGGTTGGATCTGGATCATGTATGAAATCTTTATGGGTGAAGCGAGCAAGATCAACGCTGCCAGTGGTAATGCCATTGCTCAGAAAGCTTACGGCGCCATGCGTATGCTGGTTACTGTTGGATGGGCGATTTAT YIDWLLTVPLLIIEFYLILSAITKVPVGVFWRLLAGSLIMLVAGFAGEVNPDYVVSGFVVGMLGWIWIMYEIFMGEASKINAASGNAIAQKAYGAMRMLVTVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATTGACTGG------------------------CTGCTCACAGTGCCACTACTGATTATCGAATTCTATTTGATCCTATCTGCA---------ATT---ACTAAAGTACCTGTC---GGCGTT------------------------------------TTCTGGCGT---TTACTAGCAGGCTCTTTGATTATGCTTGTTGCTGGTTTTGCTGGCGAA---------GTA------------------AAT------CCT---------------------------------GAT------------------------------------------------------------------TACGTA------------------GTCTCTGGC---TTCGTTGTTGGTATGCTGGGTTGGATCTGGATCATGTATGAAATC---------------TTT------ATG---GGTGAAGCGAGCAAGATCAACGCTGCC------AGT---GGTAATGCCATTGCT---CAG---AAA---GCT---TAC---GGC---GCCATG---CGTATGCTGGTTACTGTT---------------------------------------------------------------GGATGG---------GCGATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YIDW--------LLTVPLLIIEFYLILSA---I-TKVPV-GV------------FWR-LLAGSLIMLVAGFAGE---V------N--P-----------D----------------------YV------VSG-FVVGMLGWIWIMYEI-----F--M-GEASKINAA--S-GNAIA-Q-K-A-Y-G-AM-RMLVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [I-Gamma2-BD17]_JX863240 [I-Gamma2-BD17] MALINA_OTU05_282_L_env_samples_JX863240 gi|425477430|gb|JX863240| Uncultured bacterium clone MALINA OTU05 282 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU05 282 L putative proteorhodopsin mRNA, partial cds JX863240 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/BD17 HTCC2143-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 BD17 HTCC2143-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 02Aug2009 40m_depth Arctic Ocean marine 69.61 -138.23 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGCTCACAGTGCCACTACTGATCATCGAATTCTATTTGATCCTATCTGCAATTACTAAAGTACCTGTCGGCGTTTTCTGGCGTTTACTAGCAGGCTCTTTGATTATGCTTGTTGCTGGTTTTGCTGGCGAAGTAAATCCTGATTACGTAGTCTCTGGCTTCGTTGTTGGTATGCTGGGTTGGATCTGGATCATGTATGAAATCTTTATGGGTGAAGCGAGCAAGATCAACACTGCCAGTGGTAATGCCATTGCTCAGAAAGCTTACGGCGCCATGCGTATGCTGGTTACTGTT WLLTVPLLIIEFYLILSAITKVPVGVFWRLLAGSLIMLVAGFAGEVNPDYVVSGFVVGMLGWIWIMYEIFMGEASKINTASGNAIAQKAYGAMRMLVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGCTCACAGTGCCACTACTGATCATCGAATTCTATTTGATCCTATCTGCA---------ATT---ACTAAAGTACCTGTC---GGCGTT------------------------------------TTCTGGCGT---TTACTAGCAGGCTCTTTGATTATGCTTGTTGCTGGTTTTGCTGGCGAA---------GTA------------------AAT------CCT---------------------------------GAT------------------------------------------------------------------TACGTA------------------GTCTCTGGC---TTCGTTGTTGGTATGCTGGGTTGGATCTGGATCATGTATGAAATC---------------TTT------ATG---GGTGAAGCGAGCAAGATCAACACTGCC------AGT---GGTAATGCCATTGCT---CAG---AAA---GCT---TAC---GGC---GCCATG---CGTATGCTGGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLIIEFYLILSA---I-TKVPV-GV------------FWR-LLAGSLIMLVAGFAGE---V------N--P-----------D----------------------YV------VSG-FVVGMLGWIWIMYEI-----F--M-GEASKINTA--S-GNAIA-Q-K-A-Y-G-AM-RMLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-BD17]_JX863241 [I-Gamma2-BD17] MALINA_OTU05_304_L_env_samples_JX863241 gi|425477432|gb|JX863241| Uncultured bacterium clone MALINA OTU05 304 L putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU05 304 L putative proteorhodopsin mRNA, partial cds JX863241 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/BD17 HTCC2143-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 BD17 HTCC2143-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 02Aug2009 40m_depth Arctic Ocean marine 69.61 -138.23 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGCTCACAGTGCCACTACTGATCATCGAATTCTATTTGATCCTATCTGCCATTACTAAAGTACCTGTCGGCGTTTTCTGGCGTTTACTAGCAGGCTCTTTGATTATGCTTGTTGCTGGTTTTGCTGGCGAAGTAAATCCTGATTACGTAGTCTCTGGCTTCGTTGTTGGTATGCTGGGTCGGATCTGGATCATGTATGAAATCTTTATGGGTGAAGCGAGCAAGATCAACGCTGCCAGTGGTAATGCCATTGCTCAGAAAGCTTACGGCGCCATGCGTATGCTGGTTACTGTT WLLTVPLLIIEFYLILSAITKVPVGVFWRLLAGSLIMLVAGFAGEVNPDYVVSGFVVGMLGRIWIMYEIFMGEASKINAASGNAIAQKAYGAMRMLVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGCTCACAGTGCCACTACTGATCATCGAATTCTATTTGATCCTATCTGCC---------ATT---ACTAAAGTACCTGTC---GGCGTT------------------------------------TTCTGGCGT---TTACTAGCAGGCTCTTTGATTATGCTTGTTGCTGGTTTTGCTGGCGAA---------GTA------------------AAT------CCT---------------------------------GAT------------------------------------------------------------------TACGTA------------------GTCTCTGGC---TTCGTTGTTGGTATGCTGGGTCGGATCTGGATCATGTATGAAATC---------------TTT------ATG---GGTGAAGCGAGCAAGATCAACGCTGCC------AGT---GGTAATGCCATTGCT---CAG---AAA---GCT---TAC---GGC---GCCATG---CGTATGCTGGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLIIEFYLILSA---I-TKVPV-GV------------FWR-LLAGSLIMLVAGFAGE---V------N--P-----------D----------------------YV------VSG-FVVGMLGRIWIMYEI-----F--M-GEASKINAA--S-GNAIA-Q-K-A-Y-G-AM-RMLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-BD17]_JX863146 [I-Gamma2-BD17] MALINA_OTU05_140_P_env_samples_JX863146 gi|425477242|gb|JX863146| Uncultured bacterium clone MALINA OTU05 140 P putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU05 140 P putative proteorhodopsin gene, partial cds JX863146 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/BD17 HTCC2143-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 BD17 HTCC2143-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) unknown (P105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 08Aug2009 3m_depth Arctic Ocean marine 70.8 -133.73 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTGCTCACAGCGCCACTACCGATCATCGAATTCTATTTGATCCTATCTGCCATTACTAAAGTACCTGTCGGCGTTTTCTGGCGTTTACTAGCAGGCTCTTTGATTATGCTTGTTGCTGGTTTTGCTGGCGAAGTAAATCCTGATTACGTAGTCTCTGGCTTCGTTGTTGGTATGCTGGGTTGGATCTGGATCATGTGTGAAATCTTTATGGGTGAAGCGAGCAAGATCAACGCTGCCAGTGGTAATGCCATTGCTCAGAAAGCTTACGGCGCCATGCGTATGCTGGTTACTGTT WLLTAPLPIIEFYLILSAITKVPVGVFWRLLAGSLIMLVAGFAGEVNPDYVVSGFVVGMLGWIWIMCEIFMGEASKINAASGNAIAQKAYGAMRMLVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTGCTCACAGCGCCACTACCGATCATCGAATTCTATTTGATCCTATCTGCC---------ATT---ACTAAAGTACCTGTC---GGCGTT------------------------------------TTCTGGCGT---TTACTAGCAGGCTCTTTGATTATGCTTGTTGCTGGTTTTGCTGGCGAA---------GTA------------------AAT------CCT---------------------------------GAT------------------------------------------------------------------TACGTA------------------GTCTCTGGC---TTCGTTGTTGGTATGCTGGGTTGGATCTGGATCATGTGTGAAATC---------------TTT------ATG---GGTGAAGCGAGCAAGATCAACGCTGCC------AGT---GGTAATGCCATTGCT---CAG---AAA---GCT---TAC---GGC---GCCATG---CGTATGCTGGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTAPLPIIEFYLILSA---I-TKVPV-GV------------FWR-LLAGSLIMLVAGFAGE---V------N--P-----------D----------------------YV------VSG-FVVGMLGWIWIMCEI-----F--M-GEASKINAA--S-GNAIA-Q-K-A-Y-G-AM-RMLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-BD17]_FJ862919 [I-Gamma2-BD17] 07_env_samples_FJ862919 gi|226897382|gb|FJ862919| Uncultured bacterium clone 07 putative proteorhodopsin gene, partial cds Uncultured bacterium clone 07 putative proteorhodopsin gene, partial cds FJ862919 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/BD17 HTCC2143-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 BD17 HTCC2143-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 07-Dec-2009 #na coastal_seawater Atlantic Ocean marine 38.8489 -75.1076 Lightdependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTAGATTGGCTGCTCACAGTGCCACTGCTGATCATCGAATTCTATTTGATCCTATCTGCCATTACTAAAGTACCGGTAGGCGTTTTCTGGCGTTTACTAGCAGGTTCTTTGATTATGCTTGTTGCTGGTTTTGCCGGCGAAGTAAATCCTGATTACGTAGTCTCTGGCTTTGTTGTTGGTATGCTGGGTTGGATCTGGATTATGTATGAAATCTTTATGGGTGAAGCGAGCAAGATCAACGCTGCCAGTGGTAATGCCATTGCTCAGAAAGCTTACGGGGCCATGCGTATGCTGGTTACTGTTGGTTGGGCCATCTACGCTCGA VDWLLTVPLLIIEFYLILSAITKVPVGVFWRLLAGSLIMLVAGFAGEVNPDYVVSGFVVGMLGWIWIMYEIFMGEASKINAASGNAIAQKAYGAMRMLVTVGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGATTGG------------------------CTGCTCACAGTGCCACTGCTGATCATCGAATTCTATTTGATCCTATCTGCC---------ATT---ACTAAAGTACCGGTA---GGCGTT------------------------------------TTCTGGCGT---TTACTAGCAGGTTCTTTGATTATGCTTGTTGCTGGTTTTGCCGGCGAA---------GTA------------------AAT------CCT---------------------------------GAT------------------------------------------------------------------TACGTA------------------GTCTCTGGC---TTTGTTGTTGGTATGCTGGGTTGGATCTGGATTATGTATGAAATC---------------TTT------ATG---GGTGAAGCGAGCAAGATCAACGCTGCC------AGT---GGTAATGCCATTGCT---CAG---AAA---GCT---TAC---GGG---GCCATG---CGTATGCTGGTTACTGTT---------------------------------------------------------------GGTTGG---------GCCATCTACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LLTVPLLIIEFYLILSA---I-TKVPV-GV------------FWR-LLAGSLIMLVAGFAGE---V------N--P-----------D----------------------YV------VSG-FVVGMLGWIWIMYEI-----F--M-GEASKINAA--S-GNAIA-Q-K-A-Y-G-AM-RMLVTV---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [I-Gamma2-BD17]_NZ_AAVT01000004 [I-Gamma2-BD17] Gammaproteobacteria_HTCC2143_1100111000171_genome_NZ_AAVT01000004 gi|119476593|gb|NZ_AAVT01000004| Marine gamma proteobacterium HTCC2143 1100111000171, whole genome shotgun sequence Marine gamma proteobacterium HTCC2143 1100111000171, whole genome shotgun sequence NZ_AAVT01000004 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/BD17 HTCC2143-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 BD17 HTCC2143-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Gammaproteobacteria/OMG group/BD17 clade] taxon:247633 genomic_DNA strain 09-May-2013 #na #na Pacific Ocean marine 44.65167 -124.064441 Genome sequence of the oligotrophic marine Gammaproteobacterium HTCC2143, isolated from the Oregon Coast Oh,H.M., Kang,I., Ferriera,S., Giovannoni,S.J. and Cho,J.C. J. Bacteriol. 192 (17), 45304531 (2010) 20601481 #na ATGACTACTAATCTTAGCGCCAGCGATCCAGTTGGCATGTCCTTTTGGTTAATTTCTATGGCGATGGTCGCCGCGACTGTGTTCTTTCTTATTGAGCGCGATCGTGTCAGCGGCAAGTGGAAGACATCTCTGACAGTAGCAGGTCTTGTGACCTTGATTGCTGCGGTGCATTACTTCTATATGCGCGATGTATGGGTTGCAACGGGTGAAACGCCAACAGTCTATCGTTATATTGACTGGCTGCTCACAGTGCCTCTGCTGATCATTGAATTCTATTTGATTCTATCTGCCATCACTAAAGTACCCGTCGGCGTTTTCTGGCGCTTACTGGCAGGCTCTTTGATTATGCTTGGTGCTGGTTTTGTCGGCGAAGTAAATCCTGACTATGTCGTCTCTGGCTTTGTGGTTGGAATGCTGGGCTGGGTATGGATCATGTACGAGATCTTTCTCGGTGAGGCTAGCAAGATCAACGCTGCTAGTGGTAATGCAATTGCACAGAAAGCCTACGGCGCAATGCGCTTGTTGGTGACTGTTGGTTGGGCTATTTACCCTATTGGTTACGTCCTCGGTTACTTCACTGGGTCTACTGACTCGGCGACGCTTAACCTTTGGTACAACGTAGCTGACCTCTGGAACAAGGTTGCCTTCGGTCTGGTTATTTGGGCCGCTGCGGTCGCTGACTCAGAG MTTNLSASDPVGMSFWLISMAMVAATVFFLIERDRVSGKWKTSLTVAGLVTLIAAVHYFYMRDVWVATGETPTVYRYIDWLLTVPLLIIEFYLILSAITKVPVGVFWRLLAGSLIMLGAGFVGEVNPDYVVSGFVVGMLGWVWIMYEIFLGEASKINAASGNAIAQKAYGAMRLLVTVGWAIYPIGYVLGYFTGSTDSATLNLWYNVADLWNKVAFGLVIWAAAVADSE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGACTACTAATCTTAGCGCCAGCGATCCAGTTGGCATGTCCTTTTGGTTAATTTCTATGGCGATGGTCGCCGCGACTGTGTTCTTTCTTATTGAGCGCGATCGTGTCAGCGGC---AAGTGGAAGACATCTCTGACAGTAGCAGGTCTTGTGACCTTGATTGCTGCGGTGCATTACTTCTATATGCGCGATGTATGGGTT---------------------------------------------------GCAACGGGTGAAACGCCAACAGTCTATCGTTATATTGACTGG------------------------CTGCTCACAGTGCCTCTGCTGATCATTGAATTCTATTTGATTCTATCTGCC---------ATC---ACTAAAGTACCCGTC---GGCGTT------------------------------------TTCTGGCGC---TTACTGGCAGGCTCTTTGATTATGCTTGGTGCTGGTTTTGTCGGCGAA---------GTA------------------AAT------CCT---------------------------------GAC------------------------------------------------------------------TATGTC------------------GTCTCTGGC---TTTGTGGTTGGAATGCTGGGCTGGGTATGGATCATGTACGAGATC---------------TTT------CTC---GGTGAGGCTAGCAAGATCAACGCTGCT------AGT---GGTAATGCAATTGCA---CAG---AAA---GCC---TAC---GGC---GCAATG---CGCTTGTTGGTGACTGTT---------------------------------------------------------------GGTTGG---------GCTATTTACCCTATTGGTTACGTCCTCGGTTACTTC---------------------------------------ACTGGGTCTACTGACTCGGCGACGCTTAACCTTTGGTACAACGTAGCTGACCTCTGGAACAAGGTTGCCTTCGGTCTGGTTATTTGGGCCGCTGCGGTCGCTGAC---TCAGAG--------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------MTTNLSASDPVGMSFWLISMAMVAATVFFLIERDRVSG-KWKTSLTVAGLVTLIAAVHYFYMRDVWV-----------------ATGETPTVYRYIDW--------LLTVPLLIIEFYLILSA---I-TKVPV-GV------------FWR-LLAGSLIMLGAGFVGE---V------N--P-----------D----------------------YV------VSG-FVVGMLGWVWIMYEI-----F--L-GEASKINAA--S-GNAIA-Q-K-A-Y-G-AM-RLLVTV---------------------GW---AIYPIGYVLGYF-------------TGSTDSATLNLWYNVADLWNKVAFGLVIWAAAVAD-SE--------------------------------------- [I-Gamma2-BD17]_KJ926196 [I-Gamma2-BD17] RHOMEO_AG_OTU16 gb|KJ926196| Uncultured bacterium cloneRHOMEO AG OTU16 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU16 putative proteorhodopsin gene, partial cds KJ926196 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/BD17 HTCC2143-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 BD17 HTCC2143-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGTTACTCACAGTTCCGCTTCTCATTATTGAGTTCTATTTGATTCTATCTGCCATTACCAAGGTGCCTGCAGGCGTATTCTGGCGCTTGCTCGCAGGGTCTTTGATTATGCTTGGCGCAGGCTTTTTGGGTGAAGTTAACCCAGCATATGTCACCTCAGGCTTCATAGTGGGTATGTTAGGTTGGTTGTGGATCATGTACGAAATCTTCTACGGCGAAGCAAGCAAGCTAAACGCGGCAAGCGGTAGCGTTATCGTACAAAAAGCCTATGGTGCAATGCGTTTGTTAGTGACTGTA WLLTVPLLIIEFYLILSAITKVPAGVFWRLLAGSLIMLGAGFLGEVNPAYVTSGFIVGMLGWLWIMYEIFYGEASKLNAASGSVIVQKAYGAMRLLVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTACTCACAGTTCCGCTTCTCATTATTGAGTTCTATTTGATTCTATCTGCC---------ATT---ACCAAGGTGCCTGCA---GGCGTA------------------------------------TTCTGGCGC---TTGCTCGCAGGGTCTTTGATTATGCTTGGCGCAGGCTTTTTGGGTGAA---------GTT------------------AAC------CCA---------------------------------GCA------------------------------------------------------------------TATGTC------------------ACCTCAGGC---TTCATAGTGGGTATGTTAGGTTGGTTGTGGATCATGTACGAAATC---------------TTC------TAC---GGCGAAGCAAGCAAGCTAAACGCGGCA------AGC---GGTAGCGTTATCGTA---CAA---AAA---GCC---TAT---GGT---GCAATG---CGTTTGTTAGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLIIEFYLILSA---I-TKVPA-GV------------FWR-LLAGSLIMLGAGFLGE---V------N--P-----------A----------------------YV------TSG-FIVGMLGWLWIMYEI-----F--Y-GEASKLNAA--S-GSVIV-Q-K-A-Y-G-AM-RLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-b]_KJ926169 [I-Gamma2-b] RHOMEO_AG_OTU12_u2 gb|KJ926169| Uncultured bacterium cloneRHOMEO AG OTU12 u2 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU12 u2 putative proteorhodopsin gene, partial cds KJ926169 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGTTATTAACTGTCCCCCTGCAGATTATCGAATTTTTCCTGATTCTGGCCGCGATTACGGTGGTGCCAGCATCGCTGTTTTGGAAACTGTTGATTGCCTCGATTGTTATGTTGGTGGGTGGTTATCTTGGCGAAGCGGGCTTTATTGATGTTACCGTTGGCTTTGTAATTGGAATGGTCGGCTGGCTCTATATCATCTATGAAATTTTCGTGGGCGAAGCGAGTAAGATAAATGCAAGTAGTGGTAATGCTGCAAGTCAAAGTGCGTTTAAGACTATTCGACTCATCGTGACGATT WLLTVPLQIIEFFLILAAITVVPASLFWKLLIASIVMLVGGYLGEAGFIDVTVGFVIGMVGWLYIIYEIFVGEASKINASSGNAASQSAFKTIRLIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTATTAACTGTCCCCCTGCAGATTATCGAATTTTTCCTGATTCTGGCCGCG---------ATT---ACGGTGGTGCCAGCA---TCGCTG------------------------------------TTTTGGAAA---CTGTTGATTGCCTCGATTGTTATGTTGGTGGGTGGTTATCTTGGCGAA---------GCG------------------GGC------TTT---------------------------------ATT------------------------------------------------------------------GATGTT------------------ACCGTTGGC---TTTGTAATTGGAATGGTCGGCTGGCTCTATATCATCTATGAAATT---------------TTC------GTG---GGCGAAGCGAGTAAGATAAATGCAAGT------AGT---GGTAATGCTGCAAGT---CAA---AGT---GCG---TTT---AAG---ACTATT---CGACTCATCGTGACGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLQIIEFFLILAA---I-TVVPA-SL------------FWK-LLIASIVMLVGGYLGE---A------G--F-----------I----------------------DV------TVG-FVIGMVGWLYIIYEI-----F--V-GEASKINAS--S-GNAAS-Q-S-A-F-K-TI-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-b]_KJ926170 [I-Gamma2-b] RHOMEO_AG_OTU12_u3 gb|KJ926170| Uncultured bacterium cloneRHOMEO AG OTU12 u3 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU12 u3 putative proteorhodopsin gene, partial cds KJ926170 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGTTATTAACTGTCCCCCTGCAGATTATCGAGTTTTTCCTGATTCTGGCCGCGATTACGGTGGTGCCAGCATCGCTGTTTTGGAAACTGTTGATTGCCTCGATTGTTATGTTGGTGGGTGGTTATCTTGGCGAAGCGGGCTTTATTGATGTTACCGTTGGCTTTGTAATTGGAATGGTCGGCTGGCTCTATATCATCTATGAAATTTTCGTGGGCGAAGCGAGTAAGATAAATGCAAGTAGTGGCAATGCTGCAAGTCAAAGTGCGTTTAAGACTATTCGACTCATCGTGACGATT WLLTVPLQIIEFFLILAAITVVPASLFWKLLIASIVMLVGGYLGEAGFIDVTVGFVIGMVGWLYIIYEIFVGEASKINASSGNAASQSAFKTIRLIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTATTAACTGTCCCCCTGCAGATTATCGAGTTTTTCCTGATTCTGGCCGCG---------ATT---ACGGTGGTGCCAGCA---TCGCTG------------------------------------TTTTGGAAA---CTGTTGATTGCCTCGATTGTTATGTTGGTGGGTGGTTATCTTGGCGAA---------GCG------------------GGC------TTT---------------------------------ATT------------------------------------------------------------------GATGTT------------------ACCGTTGGC---TTTGTAATTGGAATGGTCGGCTGGCTCTATATCATCTATGAAATT---------------TTC------GTG---GGCGAAGCGAGTAAGATAAATGCAAGT------AGT---GGCAATGCTGCAAGT---CAA---AGT---GCG---TTT---AAG---ACTATT---CGACTCATCGTGACGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLQIIEFFLILAA---I-TVVPA-SL------------FWK-LLIASIVMLVGGYLGE---A------G--F-----------I----------------------DV------TVG-FVIGMVGWLYIIYEI-----F--V-GEASKINAS--S-GNAAS-Q-S-A-F-K-TI-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-b]_KJ926168 [I-Gamma2-b] RHOMEO_AG_OTU12 gb|KJ926168| Uncultured bacterium cloneRHOMEO AG OTU12 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU12 putative proteorhodopsin gene, partial cds KJ926168 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGTTATTAACTGTCCCCCTGCAGATTATCGAATTTTTCCTGATTCTGGCCGCGATTACGGTGGTGCCAGCATCGCTGTTTTGGAAACTGTTGATTGCCTCGATTGTTATGTTGGTGGGTGGTTATCTTGGCGAAGCGGGCTTTATTGATGTTACCGTTGGCTTTGTAATTGGAATGGTCGGCTGGCTCTATATCATCTATGAAATTTTCGTGGGCGAAGCGAGTAAGATAAATGCAAGTAGTGGTAATGCTGCAAGTCAAAGTGCGTTTAAGACTATTCGACTCATCGTGACGATT WLLTVPLQIIEFFLILAAITVVPASLFWKLLIASIVMLVGGYLGEAGFIDVTVGFVIGMVGWLYIIYEIFVGEASKINASSGNAASQSAFKTIRLIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTATTAACTGTCCCCCTGCAGATTATCGAATTTTTCCTGATTCTGGCCGCG---------ATT---ACGGTGGTGCCAGCA---TCGCTG------------------------------------TTTTGGAAA---CTGTTGATTGCCTCGATTGTTATGTTGGTGGGTGGTTATCTTGGCGAA---------GCG------------------GGC------TTT---------------------------------ATT------------------------------------------------------------------GATGTT------------------ACCGTTGGC---TTTGTAATTGGAATGGTCGGCTGGCTCTATATCATCTATGAAATT---------------TTC------GTG---GGCGAAGCGAGTAAGATAAATGCAAGT------AGT---GGTAATGCTGCAAGT---CAA---AGT---GCG---TTT---AAG---ACTATT---CGACTCATCGTGACGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLQIIEFFLILAA---I-TVVPA-SL------------FWK-LLIASIVMLVGGYLGE---A------G--F-----------I----------------------DV------TVG-FVIGMVGWLYIIYEI-----F--V-GEASKINAS--S-GNAAS-Q-S-A-F-K-TI-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-b]_KJ926171 [I-Gamma2-b] RHOMEO_AG_OTU12_u4 gb|KJ926171| Uncultured bacterium cloneRHOMEO AG OTU12 u4 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU12 u4 putative proteorhodopsin gene, partial cds KJ926171 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGTTATTAACTGTCCCCCTGCAGATTATCGAATTTTTCCTGATTCTGGCCGCGATTACGGTGGTGCCAGCATCGCTGTTTTGGAAACTGTTGATTGCCTCGATTGTTATGTTGGTGGGTGGTTATCTTGGCGAAGCGGGCTTTATTGATGTTACCGTTGGCTTTGTAATTGGAATGGTCGGCTGGCTCTATATCATCTATGAAATTTTCGTGGGCGAAGCGAGTAAGATAAATGCAAGTAGTGGTAATGCTGCAAGTCAAAGTGCGTTTAAGACTATTCGACTCATTGTGACGATT WLLTVPLQIIEFFLILAAITVVPASLFWKLLIASIVMLVGGYLGEAGFIDVTVGFVIGMVGWLYIIYEIFVGEASKINASSGNAASQSAFKTIRLIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTATTAACTGTCCCCCTGCAGATTATCGAATTTTTCCTGATTCTGGCCGCG---------ATT---ACGGTGGTGCCAGCA---TCGCTG------------------------------------TTTTGGAAA---CTGTTGATTGCCTCGATTGTTATGTTGGTGGGTGGTTATCTTGGCGAA---------GCG------------------GGC------TTT---------------------------------ATT------------------------------------------------------------------GATGTT------------------ACCGTTGGC---TTTGTAATTGGAATGGTCGGCTGGCTCTATATCATCTATGAAATT---------------TTC------GTG---GGCGAAGCGAGTAAGATAAATGCAAGT------AGT---GGTAATGCTGCAAGT---CAA---AGT---GCG---TTT---AAG---ACTATT---CGACTCATTGTGACGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLQIIEFFLILAA---I-TVVPA-SL------------FWK-LLIASIVMLVGGYLGE---A------G--F-----------I----------------------DV------TVG-FVIGMVGWLYIIYEI-----F--V-GEASKINAS--S-GNAAS-Q-S-A-F-K-TI-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I]_EU079236 [I] clone_A_Mtd1_008_EU079236 gi|156106631|gb|EU079236| Uncultured organism clone A Mtd1 008 putative proteorhodopsin gene, partial cds. Uncultured organism clone A Mtd1 008 putative proteorhodopsin gene, partial cds. EU079236 [[proteorhodopsin super-cluster I]] proteorhodopsin super-cluster I proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic DNA other 27-FEB-2008 #na Sargasso Sea surface water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99-109 (2008) 18211270 #na CTGCAAATGGTCGAATTCTACTTCATTCTTGCAGCAGTCGCTGTAGTTAGTGCAGGTATATTTTGGAGATTGCTCCTTGGATCTCTTGTTATGCTATTTGCAGGTTATCTAGGTGAAGCTGGAATGATAAATGCTTGGCTAGGTTTCCTAGTCGGAATGGCAGGCTGGCTATTCATTCTGTATGAAATCTTTGCGGTGAAGCCGGC LQMVEFYFILAAVAVVSAGIFWRLLLGSLVMLFAGYLGEAGMINAWLGFLVGMAGWLFILYEIFAVKP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCAAATGGTCGAATTCTACTTCATTCTTGCAGCA---------GTC---GCTGTAGTTAGTGCA---GGTATA------------------------------------TTTTGGAGA---TTGCTCCTTGGATCTCTTGTTATGCTATTTGCAGGTTATCTAGGTGAA---------GCT------------------GGA------ATG---------------------------------ATA------------------------------------------------------------------AATGCT------------------TGGCTAGGT---TTCCTAGTCGGAATGGCAGGCTGGCTATTCATTCTGTATGAAATC---------------TTT------GCG---GTGAAGCCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LQMVEFYFILAA---V-AVVSA-GI------------FWR-LLLGSLVMLFAGYLGE---A------G--M-----------I----------------------NA------WLG-FLVGMAGWLFILYEI-----F--A-VKP------------------------------------------------------------------------------------------------------------------------------------------------------------------- [I]_EU079239 [I] clone_A_Mtd1_009_EU079239 gi|156106637|gb|EU079239| Uncultured organism clone A Mtd1 009 putative proteorhodopsin gene, partial cds. Uncultured organism clone A Mtd1 009 putative proteorhodopsin gene, partial cds. EU079239 [[proteorhodopsin super-cluster I]] proteorhodopsin super-cluster I proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic DNA other 27-FEB-2008 #na Sargasso Sea surface water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99-109 (2008) 18211270 #na CTGCAAATGGTCGAATTCTACTTCATTCTTGCAGCAGTCGCTGTAGTTAGTGCAGGTATATTTTGGAGATTGCTCCTTGGATCTCTTGTTATGCTATTTGCAGGTTATCTAGGTGAAGCTGGAATGATAAATGCTTGGCTAGGTTTCCTAGTCGGAATGGCAGGCTGGCTATTCATTCTGTATGAAATCTTTGCGGTGAAGCCGGC LQMVEFYFILAAVAVVSAGIFWRLLLGSLVMLFAGYLGEAGMINAWLGFLVGMAGWLFILYEIFAVKP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCAAATGGTCGAATTCTACTTCATTCTTGCAGCA---------GTC---GCTGTAGTTAGTGCA---GGTATA------------------------------------TTTTGGAGA---TTGCTCCTTGGATCTCTTGTTATGCTATTTGCAGGTTATCTAGGTGAA---------GCT------------------GGA------ATG---------------------------------ATA------------------------------------------------------------------AATGCT------------------TGGCTAGGT---TTCCTAGTCGGAATGGCAGGCTGGCTATTCATTCTGTATGAAATC---------------TTT------GCG---GTGAAGCCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LQMVEFYFILAA---V-AVVSA-GI------------FWR-LLLGSLVMLFAGYLGE---A------G--M-----------I----------------------NA------WLG-FLVGMAGWLFILYEI-----F--A-VKP------------------------------------------------------------------------------------------------------------------------------------------------------------------- [I-env6-b]_FJ560854 [I-env6-b] HEL144_env_samples_FJ560854 gi|223868855|gb|FJ560854| Uncultured microorganism clone HEL144 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL144 putative proteorhodopsin gene, partial cds FJ560854 [[proteorhodopsin super-cluster I/env cluster 6/B subcluster]] proteorhodopsin super-cluster I env cluster 6 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTTCCTCTTTTGATGATAGAGTTCTACTTCATATTAGCAGCTGTAACTGCTGTAAGTGTGGGAGTTTTCTGGAGACTATTCTTGGGAACAATTGTTATGCTTCTTGGTGGTTATCTAGGCGAAGCAGGCATGATATCTGCAATGCTTGGCTTCATCATAGGGATGGCTGGCTGGTTATACATTCTATATGAAATATTTTATGGAGAAGCTGGACAGAAAGTTGTTAGTTGTGGGAGCGCTGGTGCAGAGATAGAGCGATTCACTGCATGTCGA TVPLLMIEFYFILAAVTAVSVGVFWRLFLGTIVMLLGGYLGEAGMISAMLGFIIGMAGWLYILYEIFYGEAGQKVVSCGSAGAEIERFTACR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTTCCTCTTTTGATGATAGAGTTCTACTTCATATTAGCAGCT---------GTA---ACTGCTGTAAGTGTG---GGAGTT------------------------------------TTCTGGAGA---CTATTCTTGGGAACAATTGTTATGCTTCTTGGTGGTTATCTAGGCGAA---------GCA------------------GGC------ATG---------------------------------ATA------------------------------------------------------------------TCTGCA------------------ATGCTTGGC---TTCATCATAGGGATGGCTGGCTGGTTATACATTCTATATGAAATA---------------TTT------TAT---GGAGAAGCTGGACAGAAAGTTGTTAGT------TGT---GGGAGCGCTGGTGCA---GAG---ATA---GAGCGATTC---ACT---GCATGT---CGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMIEFYFILAA---V-TAVSV-GV------------FWR-LFLGTIVMLLGGYLGE---A------G--M-----------I----------------------SA------MLG-FIIGMAGWLYILYEI-----F--Y-GEAGQKVVS--C-GSAGA-E-I-ERF-T-AC-R------------------------------------------------------------------------------------------------------------------------------------- [I-env6-b]_FJ560801 [I-env6-b] HEL74_env_samples_FJ560801 gi|223868749|gb|FJ560801| Uncultured microorganism clone HEL74 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL74 putative proteorhodopsin gene, partial cds FJ560801 [[proteorhodopsin super-cluster I/env cluster 6/B subcluster]] proteorhodopsin super-cluster I env cluster 6 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTTCCTCTTTTGATGATAGAGTTCTACTTCATATTAGCAGCTGTAACTGCTGTAAGTGTGGGAGTTTTCTGGAGACTATTCTTAGGAACAATTGTTATGCTTCTTGGTGGTTATCTAGGCGAAGCAGGCATGATATCTGCAATGCTTGGCTTCATCATAGGGATGGCTGGCTGGTTATACATTCTATATGAAATATTTTATGGAGAAGCTGGACAGAAAGTTGTTAGTTGTGGGAGCGCTGGTGCAGAGATGGCGTTCACTGCATGTCGAACC TVPLLMIEFYFILAAVTAVSVGVFWRLFLGTIVMLLGGYLGEAGMISAMLGFIIGMAGWLYILYEIFYGEAGQKVVSCGSAGAEMAFTACRT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTTCCTCTTTTGATGATAGAGTTCTACTTCATATTAGCAGCT---------GTA---ACTGCTGTAAGTGTG---GGAGTT------------------------------------TTCTGGAGA---CTATTCTTAGGAACAATTGTTATGCTTCTTGGTGGTTATCTAGGCGAA---------GCA------------------GGC------ATG---------------------------------ATA------------------------------------------------------------------TCTGCA------------------ATGCTTGGC---TTCATCATAGGGATGGCTGGCTGGTTATACATTCTATATGAAATA---------------TTT------TAT---GGAGAAGCTGGACAGAAAGTTGTTAGT------TGT---GGGAGCGCTGGTGCA---GAG---ATG---GCG---TTC---ACT---GCATGT---CGAACC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMIEFYFILAA---V-TAVSV-GV------------FWR-LFLGTIVMLLGGYLGE---A------G--M-----------I----------------------SA------MLG-FIIGMAGWLYILYEI-----F--Y-GEAGQKVVS--C-GSAGA-E-M-A-F-T-AC-RT------------------------------------------------------------------------------------------------------------------------------------ [I-env6-b]_FJ560807 [I-env6-b] HEL84_env_samples_FJ560807 gi|223868761|gb|FJ560807| Uncultured microorganism clone HEL84 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL84 putative proteorhodopsin gene, partial cds FJ560807 [[proteorhodopsin super-cluster I/env cluster 6/B subcluster]] proteorhodopsin super-cluster I env cluster 6 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTTCCTCTTTTGATGATAGAGTTCTACTTCATATTAGCAGCTGTAACTGCTGTAAGTGTGGGAGTTTTCTGGAGACTATTCTTAGGAACAATTGTTATGCTTCTTGGTGGTTATCTAGGCGAAGCAGGCATGATATCTGCAATGCTTGGCTTCATCATAGGGATGGCTGGCTGGTTATACATTCTATATGAAATATTTTATGGAGAAGCTGGACAGAGAGTTGTTAGTTGTGGGAGCGCTGGTGCAGAGATGGCATTCACCGCATGTCGAACC TVPLLMIEFYFILAAVTAVSVGVFWRLFLGTIVMLLGGYLGEAGMISAMLGFIIGMAGWLYILYEIFYGEAGQRVVSCGSAGAEMAFTACRT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTTCCTCTTTTGATGATAGAGTTCTACTTCATATTAGCAGCT---------GTA---ACTGCTGTAAGTGTG---GGAGTT------------------------------------TTCTGGAGA---CTATTCTTAGGAACAATTGTTATGCTTCTTGGTGGTTATCTAGGCGAA---------GCA------------------GGC------ATG---------------------------------ATA------------------------------------------------------------------TCTGCA------------------ATGCTTGGC---TTCATCATAGGGATGGCTGGCTGGTTATACATTCTATATGAAATA---------------TTT------TAT---GGAGAAGCTGGACAGAGAGTTGTTAGT------TGT---GGGAGCGCTGGTGCA---GAG---ATG---GCA---TTC---ACC---GCATGT---CGAACC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMIEFYFILAA---V-TAVSV-GV------------FWR-LFLGTIVMLLGGYLGE---A------G--M-----------I----------------------SA------MLG-FIIGMAGWLYILYEI-----F--Y-GEAGQRVVS--C-GSAGA-E-M-A-F-T-AC-RT------------------------------------------------------------------------------------------------------------------------------------ [I-env6-b]_FJ560812 [I-env6-b] HEL90_env_samples_FJ560812 gi|223868771|gb|FJ560812| Uncultured microorganism clone HEL90 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL90 putative proteorhodopsin gene, partial cds FJ560812 [[proteorhodopsin super-cluster I/env cluster 6/B subcluster]] proteorhodopsin super-cluster I env cluster 6 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTTCCTCTTTTAATGATAGAGTTCTACTTCATATTGGCAGCTGTAACTGCTGTAAGCGTGGGAGTTTTCTGGAGACTATTCTTAGGAACAATTGTTATGCTTCTTGGTGGTTATCTAGGCGAAGCAGGCAGGATATCTGAAATGCTTGGCTTCATCATAGGGATGGCTGGCTGGTTATACATTCTATATGAAATATTTTATGGAGAAGCTGGACAGAAAGTTGTTAGTTGTGGGAGCGCTGGTGCAGAGATGGCATTCACTGCATGTCGAACC TVPLLMIEFYFILAAVTAVSVGVFWRLFLGTIVMLLGGYLGEAGRISEMLGFIIGMAGWLYILYEIFYGEAGQKVVSCGSAGAEMAFTACRT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTTCCTCTTTTAATGATAGAGTTCTACTTCATATTGGCAGCT---------GTA---ACTGCTGTAAGCGTG---GGAGTT------------------------------------TTCTGGAGA---CTATTCTTAGGAACAATTGTTATGCTTCTTGGTGGTTATCTAGGCGAA---------GCA------------------GGC------AGG---------------------------------ATA------------------------------------------------------------------TCTGAA------------------ATGCTTGGC---TTCATCATAGGGATGGCTGGCTGGTTATACATTCTATATGAAATA---------------TTT------TAT---GGAGAAGCTGGACAGAAAGTTGTTAGT------TGT---GGGAGCGCTGGTGCA---GAG---ATG---GCA---TTC---ACT---GCATGT---CGAACC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMIEFYFILAA---V-TAVSV-GV------------FWR-LFLGTIVMLLGGYLGE---A------G--R-----------I----------------------SE------MLG-FIIGMAGWLYILYEI-----F--Y-GEAGQKVVS--C-GSAGA-E-M-A-F-T-AC-RT------------------------------------------------------------------------------------------------------------------------------------ [I-env6-b]_FJ560815 [I-env6-b] HEL95_env_samples_FJ560815 gi|223868777|gb|FJ560815| Uncultured microorganism clone HEL95 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL95 putative proteorhodopsin gene, partial cds FJ560815 [[proteorhodopsin super-cluster I/env cluster 6/B subcluster]] proteorhodopsin super-cluster I env cluster 6 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTTCCTCTTTTAATGATAGAGTTCTACTTCATATTGGCAGCTGTAACTGCTGTAAGCGTGGGAGTTTTCTGGAGACTATTCTTAGGAACAATTGTTATGCTTCTTGGTGGTTATCTAGGCGAAGCAGGCATGATATCTGCAATGCTTGGCTTCATCATAGGGATGGCTGGCTGGTTATACATTCTATATGAAATATTTTATGGAGAAGCTGGACAGAAAGTTGTTAGTTGTGGGAGCGCTGGTGCAGAGATGGCATTCACTGCATGTCGAACC TVPLLMIEFYFILAAVTAVSVGVFWRLFLGTIVMLLGGYLGEAGMISAMLGFIIGMAGWLYILYEIFYGEAGQKVVSCGSAGAEMAFTACRT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTTCCTCTTTTAATGATAGAGTTCTACTTCATATTGGCAGCT---------GTA---ACTGCTGTAAGCGTG---GGAGTT------------------------------------TTCTGGAGA---CTATTCTTAGGAACAATTGTTATGCTTCTTGGTGGTTATCTAGGCGAA---------GCA------------------GGC------ATG---------------------------------ATA------------------------------------------------------------------TCTGCA------------------ATGCTTGGC---TTCATCATAGGGATGGCTGGCTGGTTATACATTCTATATGAAATA---------------TTT------TAT---GGAGAAGCTGGACAGAAAGTTGTTAGT------TGT---GGGAGCGCTGGTGCA---GAG---ATG---GCA---TTC---ACT---GCATGT---CGAACC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMIEFYFILAA---V-TAVSV-GV------------FWR-LFLGTIVMLLGGYLGE---A------G--M-----------I----------------------SA------MLG-FIIGMAGWLYILYEI-----F--Y-GEAGQKVVS--C-GSAGA-E-M-A-F-T-AC-RT------------------------------------------------------------------------------------------------------------------------------------ [I-env6-b]_FJ560818 [I-env6-b] HEL98_env_samples_FJ560818 gi|223868783|gb|FJ560818| Uncultured microorganism clone HEL98 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL98 putative proteorhodopsin gene, partial cds FJ560818 [[proteorhodopsin super-cluster I/env cluster 6/B subcluster]] proteorhodopsin super-cluster I env cluster 6 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTTCCTCTTTTAATGATAGAGTTCTACTTCATATTGGCAGCTGTAACTGCTGTAAGCGTGGGAGTTTTCTGGAGACTATTCTTAGGAACAATTGTTATGCTTCTTGGTGGTTATCTAGGCGAAGCAGGCATGATATCTGCAATGCTTGGCTTCATCATAGGGATGGCTGGCTGGTTATACATTCTATATGAAATATTTTATGGAGAAGCTGGACAGAAAGTTGTTAGTTGTGGGAGCGCTGGTGCAGAGATGGCATTCACTGCATGTCGAACC TVPLLMIEFYFILAAVTAVSVGVFWRLFLGTIVMLLGGYLGEAGMISAMLGFIIGMAGWLYILYEIFYGEAGQKVVSCGSAGAEMAFTACRT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTTCCTCTTTTAATGATAGAGTTCTACTTCATATTGGCAGCT---------GTA---ACTGCTGTAAGCGTG---GGAGTT------------------------------------TTCTGGAGA---CTATTCTTAGGAACAATTGTTATGCTTCTTGGTGGTTATCTAGGCGAA---------GCA------------------GGC------ATG---------------------------------ATA------------------------------------------------------------------TCTGCA------------------ATGCTTGGC---TTCATCATAGGGATGGCTGGCTGGTTATACATTCTATATGAAATA---------------TTT------TAT---GGAGAAGCTGGACAGAAAGTTGTTAGT------TGT---GGGAGCGCTGGTGCA---GAG---ATG---GCA---TTC---ACT---GCATGT---CGAACC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMIEFYFILAA---V-TAVSV-GV------------FWR-LFLGTIVMLLGGYLGE---A------G--M-----------I----------------------SA------MLG-FIIGMAGWLYILYEI-----F--Y-GEAGQKVVS--C-GSAGA-E-M-A-F-T-AC-RT------------------------------------------------------------------------------------------------------------------------------------ [I-env6-b]_FJ560761 [I-env6-b] HEL15_env_samples_FJ560761 gi|223868669|gb|FJ560761| Uncultured microorganism clone HEL15 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL15 putative proteorhodopsin gene, partial cds FJ560761 [[proteorhodopsin super-cluster I/env cluster 6/B subcluster]] proteorhodopsin super-cluster I env cluster 6 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTTCCTCTTTTAATGATAGAGTTCTACTTCATATTGGCAGCTGTAACTGCTGTAAGCGTGGGAGTTTTCTGGAGACTATTCTTAGGAACAATTGTTATGCTTCTTGGTGGTTATCTAGGCGAAGCAGGCATGATATCTGCAATGCTTGGCTTCATCATAGGGATGGCTGGCTGGTTATACATTCTATATGAAATATTTTATGGAGAAGCTGGACAGAAAGTTGTTAGTTGTGGGAGCGCTGGTGCAGAGATGGCATGCACTGCATGTCGAACC TVPLLMIEFYFILAAVTAVSVGVFWRLFLGTIVMLLGGYLGEAGMISAMLGFIIGMAGWLYILYEIFYGEAGQKVVSCGSAGAEMACTACRT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTTCCTCTTTTAATGATAGAGTTCTACTTCATATTGGCAGCT---------GTA---ACTGCTGTAAGCGTG---GGAGTT------------------------------------TTCTGGAGA---CTATTCTTAGGAACAATTGTTATGCTTCTTGGTGGTTATCTAGGCGAA---------GCA------------------GGC------ATG---------------------------------ATA------------------------------------------------------------------TCTGCA------------------ATGCTTGGC---TTCATCATAGGGATGGCTGGCTGGTTATACATTCTATATGAAATA---------------TTT------TAT---GGAGAAGCTGGACAGAAAGTTGTTAGT------TGT---GGGAGCGCTGGTGCA---GAG---ATG---GCA---TGC---ACT---GCATGT---CGAACC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMIEFYFILAA---V-TAVSV-GV------------FWR-LFLGTIVMLLGGYLGE---A------G--M-----------I----------------------SA------MLG-FIIGMAGWLYILYEI-----F--Y-GEAGQKVVS--C-GSAGA-E-M-A-C-T-AC-RT------------------------------------------------------------------------------------------------------------------------------------ [I-env6-b]_FJ560839 [I-env6-b] HEL126_env_samples_FJ560839 gi|223868825|gb|FJ560839| Uncultured microorganism clone HEL126 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL126 putative proteorhodopsin gene, partial cds FJ560839 [[proteorhodopsin super-cluster I/env cluster 6/B subcluster]] proteorhodopsin super-cluster I env cluster 6 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTTCCTCTTTTAATGATAGAGTTCTACTTCATATTGGCAGCTGTAACTGCTGTAAGCGTGGGAGTTTTCTGGAGACTATTCTTAGGAACAATTGTTATGCTTCTTGGTGGTTATCTAGGCGAAGCAGGCATGATATCTGCAATGCTTGGCTTCATCATAGGGATGGCTGGCTGGTTATACATTCTATATGAAATATTTTATGGAGAAGCTGGACAGAAAGTTGTTAGTTGTGGGAGCGCTGGTGCAGAGATAAGCGATTCACTGCATGTC TVPLLMIEFYFILAAVTAVSVGVFWRLFLGTIVMLLGGYLGEAGMISAMLGFIIGMAGWLYILYEIFYGEAGQKVVSCGSAGAEISDSLHV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTTCCTCTTTTAATGATAGAGTTCTACTTCATATTGGCAGCT---------GTA---ACTGCTGTAAGCGTG---GGAGTT------------------------------------TTCTGGAGA---CTATTCTTAGGAACAATTGTTATGCTTCTTGGTGGTTATCTAGGCGAA---------GCA------------------GGC------ATG---------------------------------ATA------------------------------------------------------------------TCTGCA------------------ATGCTTGGC---TTCATCATAGGGATGGCTGGCTGGTTATACATTCTATATGAAATA---------------TTT------TAT---GGAGAAGCTGGACAGAAAGTTGTTAGT------TGT---GGGAGCGCTGGTGCA---GAG---ATA---AGC---GAT---TCA---CTGCAT---GTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMIEFYFILAA---V-TAVSV-GV------------FWR-LFLGTIVMLLGGYLGE---A------G--M-----------I----------------------SA------MLG-FIIGMAGWLYILYEI-----F--Y-GEAGQKVVS--C-GSAGA-E-I-S-D-S-LH-V------------------------------------------------------------------------------------------------------------------------------------- [I-env6-b]_FJ560855 [I-env6-b] HEL145_env_samples_FJ560855 gi|223868857|gb|FJ560855| Uncultured microorganism clone HEL145 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL145 putative proteorhodopsin gene, partial cds FJ560855 [[proteorhodopsin super-cluster I/env cluster 6/B subcluster]] proteorhodopsin super-cluster I env cluster 6 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTTCCTCTTTTAATGATAGAGTTCTACTTCATATTGGCAGCTGTAACTGCTGTAAGCGTGGGAGTTTTCTGGAGACTATTCTTAGGAACAATTGTTATGCTTCTTGGTGGTTATCTAGGCGAAGCAGGCATGATATCTGCAATGCTTGGCTTCATCATAGGGATGGCTGGCTGGTTATACATTCTATATGAAATATTTTATGGAGAAGCTGGACAGAAAGTTGTTAGTTGTGGGAGCGCTGGTGCAGAGATAGGCGATTCACTGCATGTC TVPLLMIEFYFILAAVTAVSVGVFWRLFLGTIVMLLGGYLGEAGMISAMLGFIIGMAGWLYILYEIFYGEAGQKVVSCGSAGAEIGDSLHV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTTCCTCTTTTAATGATAGAGTTCTACTTCATATTGGCAGCT---------GTA---ACTGCTGTAAGCGTG---GGAGTT------------------------------------TTCTGGAGA---CTATTCTTAGGAACAATTGTTATGCTTCTTGGTGGTTATCTAGGCGAA---------GCA------------------GGC------ATG---------------------------------ATA------------------------------------------------------------------TCTGCA------------------ATGCTTGGC---TTCATCATAGGGATGGCTGGCTGGTTATACATTCTATATGAAATA---------------TTT------TAT---GGAGAAGCTGGACAGAAAGTTGTTAGT------TGT---GGGAGCGCTGGTGCA---GAG---ATA---GGC---GAT---TCA---CTGCAT---GTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMIEFYFILAA---V-TAVSV-GV------------FWR-LFLGTIVMLLGGYLGE---A------G--M-----------I----------------------SA------MLG-FIIGMAGWLYILYEI-----F--Y-GEAGQKVVS--C-GSAGA-E-I-G-D-S-LH-V------------------------------------------------------------------------------------------------------------------------------------- [I-env6-b]_FJ560753 [I-env6-b] HEL4_env_samples_FJ560753 gi|223868653|gb|FJ560753| Uncultured microorganism clone HEL4 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL4 putative proteorhodopsin gene, partial cds FJ560753 [[proteorhodopsin super-cluster I/env cluster 6/B subcluster]] proteorhodopsin super-cluster I env cluster 6 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTTCCTCTTTTAATGATAGAGTTCTACTTCATATTGGCAGCTGTAACTGCTGTAAGCGTGGGAGTTTTCTGGAGACTATTCTTAGGAACAATTGTTATGCTTCTTGGTGGTTATCTAGGCGAAGCAGGCATGATATCTGCAATGCTTGGCTTCATCATAGGGATGGCTGGCTGGTTATACATTCTATATGAAATATCTTATGGAGAAGCTGGACAGAAAGTTGTTAGTTGTGGGAGCGCTGGTGCAGAGATGAAAATGGCACTGCATGTCGAACCATCG TVPLLMIEFYFILAAVTAVSVGVFWRLFLGTIVMLLGGYLGEAGMISAMLGFIIGMAGWLYILYEISYGEAGQKVVSCGSAGAEMKMALHVEPS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTTCCTCTTTTAATGATAGAGTTCTACTTCATATTGGCAGCT---------GTA---ACTGCTGTAAGCGTG---GGAGTT------------------------------------TTCTGGAGA---CTATTCTTAGGAACAATTGTTATGCTTCTTGGTGGTTATCTAGGCGAA---------GCA------------------GGC------ATG---------------------------------ATA------------------------------------------------------------------TCTGCA------------------ATGCTTGGC---TTCATCATAGGGATGGCTGGCTGGTTATACATTCTATATGAAATA---------------TCT------TAT---GGAGAAGCTGGACAGAAAGTTGTTAGT------TGT---GGGAGCGCTGGTGCA---GAG------------------------------ATG---AAAATGGCACTGCATGTCGAACCATCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMIEFYFILAA---V-TAVSV-GV------------FWR-LFLGTIVMLLGGYLGE---A------G--M-----------I----------------------SA------MLG-FIIGMAGWLYILYEI-----S--Y-GEAGQKVVS--C-GSAGA-E----------M-KMALHVEPS----------------------------------------------------------------------------------------------------------------------------- [I-env6-b]_FJ560779 [I-env6-b] HEL42_env_samples_FJ560779 gi|223868705|gb|FJ560779| Uncultured microorganism clone HEL42 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL42 putative proteorhodopsin gene, partial cds FJ560779 [[proteorhodopsin super-cluster I/env cluster 6/B subcluster]] proteorhodopsin super-cluster I env cluster 6 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTTCCTCTTTTAATGATAGAGTTCTACTTCATATTGGCAGCTGTAACTGCTGTAAGCGTGGGAGTTTTCTGGAGACTATTCTTAGGAACAATTGTTATGCTTCTTGGTGGTTATCTAGGCGAAGCAGGCATGATATCTGCAATGCTTGGCTTCATCATAGGGATGGCTGGCTGGTTATACATTCTATATGAAATATTTTATGGAGAAGCTGGACAGAAAGTTGTTAGTTGTGGGAGCGCTGGTGCAGAGATGGCAAGGGCACTGCATGTC TVPLLMIEFYFILAAVTAVSVGVFWRLFLGTIVMLLGGYLGEAGMISAMLGFIIGMAGWLYILYEIFYGEAGQKVVSCGSAGAEMARALHV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTTCCTCTTTTAATGATAGAGTTCTACTTCATATTGGCAGCT---------GTA---ACTGCTGTAAGCGTG---GGAGTT------------------------------------TTCTGGAGA---CTATTCTTAGGAACAATTGTTATGCTTCTTGGTGGTTATCTAGGCGAA---------GCA------------------GGC------ATG---------------------------------ATA------------------------------------------------------------------TCTGCA------------------ATGCTTGGC---TTCATCATAGGGATGGCTGGCTGGTTATACATTCTATATGAAATA---------------TTT------TAT---GGAGAAGCTGGACAGAAAGTTGTTAGT------TGT---GGGAGCGCTGGTGCA---GAG---ATG---GCA------------------------AGGGCACTGCATGTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMIEFYFILAA---V-TAVSV-GV------------FWR-LFLGTIVMLLGGYLGE---A------G--M-----------I----------------------SA------MLG-FIIGMAGWLYILYEI-----F--Y-GEAGQKVVS--C-GSAGA-E-M-A--------RALHV--------------------------------------------------------------------------------------------------------------------------------- [I-env6-b]_FJ560851 [I-env6-b] HEL140_env_samples_FJ560851 gi|223868849|gb|FJ560851| Uncultured microorganism clone HEL140 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL140 putative proteorhodopsin gene, partial cds FJ560851 [[proteorhodopsin super-cluster I/env cluster 6/B subcluster]] proteorhodopsin super-cluster I env cluster 6 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTTCCTCTTTTAATGATAGAGTTCTACTTCATATTGGCAGCTGTAACTGCTGTAAGCGTGGGAGTTTTCTGGAGACTATTCTTAGGAACAATTGTTATGCTTCTTGGTGGTTATCTAGGCGAAGCAGGCATGATATCTGCAATGCTTGGCTTCATCATAGGGATGGCTGGCTGGTTATACATTCTATATGAAATATTTTATGGAGAAGCTGGACAGAAAGTTGTTAGTTGTGGGAGCGCTGGTGCAGAGAAAGGCGGATTCACTGCATGTCGA TVPLLMIEFYFILAAVTAVSVGVFWRLFLGTIVMLLGGYLGEAGMISAMLGFIIGMAGWLYILYEIFYGEAGQKVVSCGSAGAEKGGFTACR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTTCCTCTTTTAATGATAGAGTTCTACTTCATATTGGCAGCT---------GTA---ACTGCTGTAAGCGTG---GGAGTT------------------------------------TTCTGGAGA---CTATTCTTAGGAACAATTGTTATGCTTCTTGGTGGTTATCTAGGCGAA---------GCA------------------GGC------ATG---------------------------------ATA------------------------------------------------------------------TCTGCA------------------ATGCTTGGC---TTCATCATAGGGATGGCTGGCTGGTTATACATTCTATATGAAATA---------------TTT------TAT---GGAGAAGCTGGACAGAAAGTTGTTAGT------TGT---GGGAGCGCTGGTGCA---GAG---AAAGGCGGA---TTC---ACT---GCATGT---CGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMIEFYFILAA---V-TAVSV-GV------------FWR-LFLGTIVMLLGGYLGE---A------G--M-----------I----------------------SA------MLG-FIIGMAGWLYILYEI-----F--Y-GEAGQKVVS--C-GSAGA-E-KGG-F-T-AC-R------------------------------------------------------------------------------------------------------------------------------------- [I-env6-b]_FJ560831 [I-env6-b] HEL115_env_samples_FJ560831 gi|223868809|gb|FJ560831| Uncultured microorganism clone HEL115 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL115 putative proteorhodopsin gene, partial cds FJ560831 [[proteorhodopsin super-cluster I/env cluster 6/B subcluster]] proteorhodopsin super-cluster I env cluster 6 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTTCCTCTTTTAATGATAGAGTTCTACTTCATATTGGCAGCTGTAACTGCTGTAAGCGTGGGAGTTTTCTGGAGACTATTCTTAGGAACAATTGTTATGCTTCTTGGTGGTTATCTAGGCGAAGCAGGCATGATATCTGCAATGCTTGGCTTCATCATAGGGATGGCTGGCTGGTTATACATTCTATATGAAATATTTTATGGAGAAGCTGGACAGAAAGTTGTTAGTTGTGGGAGCGCTGGTGCAGAGATGGCGGTTCACTGCATGTCG TVPLLMIEFYFILAAVTAVSVGVFWRLFLGTIVMLLGGYLGEAGMISAMLGFIIGMAGWLYILYEIFYGEAGQKVVSCGSAGAEMAVHCMS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTTCCTCTTTTAATGATAGAGTTCTACTTCATATTGGCAGCT---------GTA---ACTGCTGTAAGCGTG---GGAGTT------------------------------------TTCTGGAGA---CTATTCTTAGGAACAATTGTTATGCTTCTTGGTGGTTATCTAGGCGAA---------GCA------------------GGC------ATG---------------------------------ATA------------------------------------------------------------------TCTGCA------------------ATGCTTGGC---TTCATCATAGGGATGGCTGGCTGGTTATACATTCTATATGAAATA---------------TTT------TAT---GGAGAAGCTGGACAGAAAGTTGTTAGT------TGT---GGGAGCGCTGGTGCA---GAG---ATG---GCG---GTT---CAC------TGC---ATGTCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMIEFYFILAA---V-TAVSV-GV------------FWR-LFLGTIVMLLGGYLGE---A------G--M-----------I----------------------SA------MLG-FIIGMAGWLYILYEI-----F--Y-GEAGQKVVS--C-GSAGA-E-M-A-V-H--C-MS------------------------------------------------------------------------------------------------------------------------------------ [I-env6-b]_FJ560819 [I-env6-b] HEL99_env_samples_FJ560819 gi|223868785|gb|FJ560819| Uncultured microorganism clone HEL99 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL99 putative proteorhodopsin gene, partial cds FJ560819 [[proteorhodopsin super-cluster I/env cluster 6/B subcluster]] proteorhodopsin super-cluster I env cluster 6 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTTCCTCTTTTAATGATAGAGTTCTACTTCATATTGGCAGCTGTAACTGCTGTAAGCGTGGGAGTTTTCTGGAGACTATTCTTAGGAACAATTGTTATGCTTCTTGGTGGTTATCTAGGCGAAGCAGGCATGATATCTGCAATGCTTGGCTTCATCATAGGGATGGCTGGCTGGTTATACATTCTATATGAAATATTTTATGGAGAAGCTGGACAGAAAGTTGTTAGTTGTGGGAGCGCTGGTGCAGAGATGGCGATTCACTGCATGTCG TVPLLMIEFYFILAAVTAVSVGVFWRLFLGTIVMLLGGYLGEAGMISAMLGFIIGMAGWLYILYEIFYGEAGQKVVSCGSAGAEMAIHCMS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTTCCTCTTTTAATGATAGAGTTCTACTTCATATTGGCAGCT---------GTA---ACTGCTGTAAGCGTG---GGAGTT------------------------------------TTCTGGAGA---CTATTCTTAGGAACAATTGTTATGCTTCTTGGTGGTTATCTAGGCGAA---------GCA------------------GGC------ATG---------------------------------ATA------------------------------------------------------------------TCTGCA------------------ATGCTTGGC---TTCATCATAGGGATGGCTGGCTGGTTATACATTCTATATGAAATA---------------TTT------TAT---GGAGAAGCTGGACAGAAAGTTGTTAGT------TGT---GGGAGCGCTGGTGCA---GAG---ATG---GCG---ATT---CAC------TGC---ATGTCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMIEFYFILAA---V-TAVSV-GV------------FWR-LFLGTIVMLLGGYLGE---A------G--M-----------I----------------------SA------MLG-FIIGMAGWLYILYEI-----F--Y-GEAGQKVVS--C-GSAGA-E-M-A-I-H--C-MS------------------------------------------------------------------------------------------------------------------------------------ [I-env6-b]_FJ560861 [I-env6-b] HEL151_env_samples_FJ560861 gi|223868869|gb|FJ560861| Uncultured microorganism clone HEL151 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL151 putative proteorhodopsin gene, partial cds FJ560861 [[proteorhodopsin super-cluster I/env cluster 6/B subcluster]] proteorhodopsin super-cluster I env cluster 6 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTTCCTCTTTTGATGATAGAGTTCTACTTCATATTAGCAGCTGTAACTGCTGTAAGTGTGGGAGTTTTCTGGAGACTATTCTTGGGAACAATTGTTATGCTTCTTGGTGGTTATCTAGGCGAAGCAGGCATGATATCTGCAATGCTTGGCTTCATCATAGGGATGGCTGGCTGGTTATACATTCTATATGAAATATTTTATGGAGAAGCTGGACAGAAAGTTGTTAGTTGTGGGAGCGCTGGTGCAGAGATGGCGATTCACTGCATGTCG TVPLLMIEFYFILAAVTAVSVGVFWRLFLGTIVMLLGGYLGEAGMISAMLGFIIGMAGWLYILYEIFYGEAGQKVVSCGSAGAEMAIHCMS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTTCCTCTTTTGATGATAGAGTTCTACTTCATATTAGCAGCT---------GTA---ACTGCTGTAAGTGTG---GGAGTT------------------------------------TTCTGGAGA---CTATTCTTGGGAACAATTGTTATGCTTCTTGGTGGTTATCTAGGCGAA---------GCA------------------GGC------ATG---------------------------------ATA------------------------------------------------------------------TCTGCA------------------ATGCTTGGC---TTCATCATAGGGATGGCTGGCTGGTTATACATTCTATATGAAATA---------------TTT------TAT---GGAGAAGCTGGACAGAAAGTTGTTAGT------TGT---GGGAGCGCTGGTGCA---GAG---ATG---GCG---ATT---CAC------TGC---ATGTCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMIEFYFILAA---V-TAVSV-GV------------FWR-LFLGTIVMLLGGYLGE---A------G--M-----------I----------------------SA------MLG-FIIGMAGWLYILYEI-----F--Y-GEAGQKVVS--C-GSAGA-E-M-A-I-H--C-MS------------------------------------------------------------------------------------------------------------------------------------ [I-env6-b]_FJ560773 [I-env6-b] HEL32_env_samples_FJ560773 gi|223868693|gb|FJ560773| Uncultured microorganism clone HEL32 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL32 putative proteorhodopsin gene, partial cds FJ560773 [[proteorhodopsin super-cluster I/env cluster 6/B subcluster]] proteorhodopsin super-cluster I env cluster 6 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTTCCTCTTTTAATGATAGAGTTCTACTTCATATTGGCAGCTGTAACTGCTGTAAGCGTGGGAGTTTTCTGGAGACTATTCTTAGGAACAATTGTTATGCTTCTTGGTGGTTATCTAGGCGAAGCAGGCATGATATCTGCAATGCTTGGCTTCATCATAGGGATGGCTGGCTGGTTATACATTCTATATGAAATATTTTATGGAGAAGCTGGACAGAAAGTTGTTAGTTGTGGGAGCGCTGGTGCAGACATT TVPLLMIEFYFILAAVTAVSVGVFWRLFLGTIVMLLGGYLGEAGMISAMLGFIIGMAGWLYILYEIFYGEAGQKVVSCGSAGADI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTTCCTCTTTTAATGATAGAGTTCTACTTCATATTGGCAGCT---------GTA---ACTGCTGTAAGCGTG---GGAGTT------------------------------------TTCTGGAGA---CTATTCTTAGGAACAATTGTTATGCTTCTTGGTGGTTATCTAGGCGAA---------GCA------------------GGC------ATG---------------------------------ATA------------------------------------------------------------------TCTGCA------------------ATGCTTGGC---TTCATCATAGGGATGGCTGGCTGGTTATACATTCTATATGAAATA---------------TTT------TAT---GGAGAAGCTGGACAGAAAGTTGTTAGT------TGT---GGGAGCGCTGGTGCA---GAC---ATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMIEFYFILAA---V-TAVSV-GV------------FWR-LFLGTIVMLLGGYLGE---A------G--M-----------I----------------------SA------MLG-FIIGMAGWLYILYEI-----F--Y-GEAGQKVVS--C-GSAGA-D-I------------------------------------------------------------------------------------------------------------------------------------------------ [I-env6-b]_FJ560853 [I-env6-b] HEL143_env_samples_FJ560853 gi|223868853|gb|FJ560853| Uncultured microorganism clone HEL143 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL143 putative proteorhodopsin gene, partial cds FJ560853 [[proteorhodopsin super-cluster I/env cluster 6/B subcluster]] proteorhodopsin super-cluster I env cluster 6 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTTCCTCTTTTAATGATAGAGTTCTACTTCATATTGGCAGCTGTAACTGCTGTAAGCGTGGGAGTTTTCTGGAGACTATTCTTAGGAACAATTGTTATGCTTCTTGGTGGTTATCTAGGCGAAGCAGGCATGATATCTGCAATGCTTGGCTTCATCATAGGGATGGCTGGCTGGTTATACATTCTATATGAAATATTTTATGGAGAAGCTGGACAGAAAGTTGTTAGTTGTGGGAGCGCTGGT TVPLLMIEFYFILAAVTAVSVGVFWRLFLGTIVMLLGGYLGEAGMISAMLGFIIGMAGWLYILYEIFYGEAGQKVVSCGSAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTTCCTCTTTTAATGATAGAGTTCTACTTCATATTGGCAGCT---------GTA---ACTGCTGTAAGCGTG---GGAGTT------------------------------------TTCTGGAGA---CTATTCTTAGGAACAATTGTTATGCTTCTTGGTGGTTATCTAGGCGAA---------GCA------------------GGC------ATG---------------------------------ATA------------------------------------------------------------------TCTGCA------------------ATGCTTGGC---TTCATCATAGGGATGGCTGGCTGGTTATACATTCTATATGAAATA---------------TTT------TAT---GGAGAAGCTGGACAGAAAGTTGTTAGT------TGT---GGGAGCGCTGGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMIEFYFILAA---V-TAVSV-GV------------FWR-LFLGTIVMLLGGYLGE---A------G--M-----------I----------------------SA------MLG-FIIGMAGWLYILYEI-----F--Y-GEAGQKVVS--C-GSAG----------------------------------------------------------------------------------------------------------------------------------------------------- [I-env6-b]_FJ560771 [I-env6-b] HEL30_env_samples_FJ560771 gi|223868689|gb|FJ560771| Uncultured microorganism clone HEL30 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL30 putative proteorhodopsin gene, partial cds FJ560771 [[proteorhodopsin super-cluster I/env cluster 6/B subcluster]] proteorhodopsin super-cluster I env cluster 6 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTTCCTCTTTTAATGATAGAGTTCTACTTCATATTGGCAGCTGTAACTGCTGTAAGCGTGGGAGTTTTCTGGAGACTATTCTTAGGAACAATTGTTATGCTTCTTGGTGGTTATCTAGGCGAAGCAGGCATGATATCTGCAATGCTTGGCTTCATCATAGGGATGGCTGGCTGGTTATACATTCTATATGAAATATTTTATGGAGAAGCTGGAAGGGAAAGTTGT TVPLLMIEFYFILAAVTAVSVGVFWRLFLGTIVMLLGGYLGEAGMISAMLGFIIGMAGWLYILYEIFYGEAGRESC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTTCCTCTTTTAATGATAGAGTTCTACTTCATATTGGCAGCT---------GTA---ACTGCTGTAAGCGTG---GGAGTT------------------------------------TTCTGGAGA---CTATTCTTAGGAACAATTGTTATGCTTCTTGGTGGTTATCTAGGCGAA---------GCA------------------GGC------ATG---------------------------------ATA------------------------------------------------------------------TCTGCA------------------ATGCTTGGC---TTCATCATAGGGATGGCTGGCTGGTTATACATTCTATATGAAATA---------------TTT------TAT---GGAGAAGCTGGAAGGGAAAGT------------TGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMIEFYFILAA---V-TAVSV-GV------------FWR-LFLGTIVMLLGGYLGE---A------G--M-----------I----------------------SA------MLG-FIIGMAGWLYILYEI-----F--Y-GEAGRES----C---------------------------------------------------------------------------------------------------------------------------------------------------------- [I-env6-b]_DQ339302 [I-env6-b] clone_S-S80M-F10_DQ339302 gi|85681577|gb|DQ339302| Uncultured bacterium clone S-S80M-F10 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S80M-F10 predicted proteorhodopsin gene, partial cds. DQ339302 [[proteorhodopsin super-cluster I/env cluster 6/B subcluster]] proteorhodopsin super-cluster I env cluster 6 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 80m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTATTAACAGTGCCACTACAAATGATAGAATTCTATTTGATCTTAGCTGCAGTCACAGCAGTAAGCGCAGGTGTATTCTATAGATTATTAGTAGGTACATTAGTTATGTTGGTTGGAGGATATGCTGGTGAAGCTGGCATTATCAACCCGTTACTTGGATTTGTTATTGGGATGGCTGGATGGATATACATTCTGTATGAAATCTTCGGCGGTGAAGCTGGACAAGTTAGTAAAACTGTCAGTGCATCCGTAGCATCAGCATTCGCAGCTTGTCGTATGGTTGTGCTTGTTGGGTGGGCCATTTATCCA RYIDWLLTVPLQMIEFYLILAAVTAVSAGVFYRLLVGTLVMLVGGYAGEAGIINPLLGFVIGMAGWIYILYEIFGGEAGQVSKTVSASVASAFAACRMVVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTATTAACAGTGCCACTACAAATGATAGAATTCTATTTGATCTTAGCTGCA---------GTC---ACAGCAGTAAGCGCA---GGTGTA------------------------------------TTCTATAGA---TTATTAGTAGGTACATTAGTTATGTTGGTTGGAGGATATGCTGGTGAA---------GCT------------------GGC------ATT---------------------------------ATC------------------------------------------------------------------AACCCG------------------TTACTTGGA---TTTGTTATTGGGATGGCTGGATGGATATACATTCTGTATGAAATC---------------TTC------GGC---GGTGAAGCTGGACAAGTTAGTAAA---------ACT---GTCAGTGCATCCGTA---GCA---TCA---GCA---TTC---GCA---GCTTGT---CGTATGGTTGTGCTTGTT---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQMIEFYLILAA---V-TAVSA-GV------------FYR-LLVGTLVMLVGGYAGE---A------G--I-----------I----------------------NP------LLG-FVIGMAGWIYILYEI-----F--G-GEAGQVSK---T-VSASV-A-S-A-F-A-AC-RMVVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-env6-b]_EF088568 [I-env6-b] clone_AT37015_EF088568 gi|126843375|gb|EF088568| Uncultured bacterium clone AT37015 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT37015 putative proteorhodopsin gene, partial cds. EF088568 [[proteorhodopsin super-cluster I/env cluster 6/B subcluster]] proteorhodopsin super-cluster I env cluster 6 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na surface water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTTGCCGCTACTGCCTTCTTCTATGCAGAAAGATCAAGAGTTTCAGCTAAATGGCAAACATCATTATCTGTAATATCATTGGTTACATTGATTGCTGCAGTACATTATTTCTATATGAGAGATGTATGGGTAAGCACTGGTGAATCGCCAACAGTATTTAGATATATTGATTGGATATTAACTGTGCCACTACAAATGATTGAATTCTACTTAATACTTGCAGCTGTAACTACAGTTAGCATAGGTGTATTCAACAGATTATTAGTTGGAACACTAGTCATGTTAATCGGTGGATACTTAGGTGAAGCGGGGGTTATCAACGCTATGCTTGGATTCATCATCGGGATGGCTGGCTGGTTATACATTCTATATGAAATATTTATGGGTGAAGCCGGACAAAAAAGCATGTCATGCGGAAGCGTAGGTGCACAAATGGCATTCAGCGCGTGTCGTATGATTGTATTAGTTGGTTGGGCAATTTACCCA MVAATAFFYAERSRVSAKWQTSLSVISLVTLIAAVHYFYMRDVWVSTGESPTVFRYIDWILTVPLQMIEFYLILAAVTTVSIGVFNRLLVGTLVMLIGGYLGEAGVINAMLGFIIGMAGWLYILYEIFMGEAGQKSMSCGSVGAQMAFSACRMIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGCCTTCTTCTATGCAGAAAGATCAAGAGTTTCAGCT---AAATGGCAAACATCATTATCTGTAATATCATTGGTTACATTGATTGCTGCAGTACATTATTTCTATATGAGAGATGTATGGGTA------------------------------AGCACT---------------------GGTGAATCGCCAACAGTATTTAGATATATTGATTGG------------------------ATATTAACTGTGCCACTACAAATGATTGAATTCTACTTAATACTTGCAGCT---------GTA---ACTACAGTTAGCATA---GGTGTA------------------------------------TTCAACAGA---TTATTAGTTGGAACACTAGTCATGTTAATCGGTGGATACTTAGGTGAA---------GCG------------------GGG------GTT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ATGCTTGGA---TTCATCATCGGGATGGCTGGCTGGTTATACATTCTATATGAAATA---------------TTT------ATG---GGTGAAGCCGGACAAAAAAGCATGTCA------TGC---GGAAGCGTAGGTGCA---CAA---ATG---GCA---TTC---AGC---GCGTGT---CGTATGATTGTATTAGTT---------------------------------------------------------------GGTTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFYAERSRVSA-KWQTSLSVISLVTLIAAVHYFYMRDVWV----------ST-------GESPTVFRYIDW--------ILTVPLQMIEFYLILAA---V-TTVSI-GV------------FNR-LLVGTLVMLIGGYLGE---A------G--V-----------I----------------------NA------MLG-FIIGMAGWLYILYEI-----F--M-GEAGQKSMS--C-GSVGA-Q-M-A-F-S-AC-RMIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-env6-b]_EF088578 [I-env6-b] clone_AT37031_EF088578 gi|126843395|gb|EF088578| Uncultured bacterium clone AT37031 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT37031 putative proteorhodopsin gene, partial cds. EF088578 [[proteorhodopsin super-cluster I/env cluster 6/B subcluster]] proteorhodopsin super-cluster I env cluster 6 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na surface water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTTGCCGCTACTGCATTCTTCTATGCAGAAAGATCAAGAGTTTCAGCTAAATGGCAAACATCATTATCTGTCATATCATTGGTTACATTGATTGCTGCAGTACATTATTTCTATATGAGAGATGTATGGGTAAGCACTGGTGAATCGCCAACAGTATTTAGATATATTGATTGGATATTAACTGTGCCACTACAAATGATTGAATTCTACTTAATACTTGCAGCTGTAACTACAGTTAGCGTAGGTGTATTCAACAGATTATTAGTTGGAACACTAGTCATGTTAATCGGTGGATATTTAGGTGAAGCGGGGGTTATCAACGCTATGCTTGGATTCATCATCGGGATGGCTGGCTGGTTATACATTCTATATGAAATATTTATGGGTGAAGCCGGACAAAAAAGCATGTCATGCGGAAGCGTAGGTGCACAAATGGCATTCAGCGCGTGTCGTATGATTGTACTAGTTGGTTGGGCGATCTATCCA MVAATAFFYAERSRVSAKWQTSLSVISLVTLIAAVHYFYMRDVWVSTGESPTVFRYIDWILTVPLQMIEFYLILAAVTTVSVGVFNRLLVGTLVMLIGGYLGEAGVINAMLGFIIGMAGWLYILYEIFMGEAGQKSMSCGSVGAQMAFSACRMIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGCATTCTTCTATGCAGAAAGATCAAGAGTTTCAGCT---AAATGGCAAACATCATTATCTGTCATATCATTGGTTACATTGATTGCTGCAGTACATTATTTCTATATGAGAGATGTATGGGTA------------------------------AGCACT---------------------GGTGAATCGCCAACAGTATTTAGATATATTGATTGG------------------------ATATTAACTGTGCCACTACAAATGATTGAATTCTACTTAATACTTGCAGCT---------GTA---ACTACAGTTAGCGTA---GGTGTA------------------------------------TTCAACAGA---TTATTAGTTGGAACACTAGTCATGTTAATCGGTGGATATTTAGGTGAA---------GCG------------------GGG------GTT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ATGCTTGGA---TTCATCATCGGGATGGCTGGCTGGTTATACATTCTATATGAAATA---------------TTT------ATG---GGTGAAGCCGGACAAAAAAGCATGTCA------TGC---GGAAGCGTAGGTGCA---CAA---ATG---GCA---TTC---AGC---GCGTGT---CGTATGATTGTACTAGTT---------------------------------------------------------------GGTTGG---------GCGATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFYAERSRVSA-KWQTSLSVISLVTLIAAVHYFYMRDVWV----------ST-------GESPTVFRYIDW--------ILTVPLQMIEFYLILAA---V-TTVSV-GV------------FNR-LLVGTLVMLIGGYLGE---A------G--V-----------I----------------------NA------MLG-FIIGMAGWLYILYEI-----F--M-GEAGQKSMS--C-GSVGA-Q-M-A-F-S-AC-RMIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-env6-b]_EF088577 [I-env6-b] clone_AT37029_EF088577 gi|126843393|gb|EF088577| Uncultured bacterium clone AT37029 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT37029 putative proteorhodopsin gene, partial cds. EF088577 [[proteorhodopsin super-cluster I/env cluster 6/B subcluster]] proteorhodopsin super-cluster I env cluster 6 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na surface water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGCTTGCCGCTACTGTTTTCTTCTATGCAGAAAGATCAAGAGTTTCAGCTAAATGGCAAACATCATTATCTGTAATATCATTGGTTACATTGATTGCTGCAGTACATTATTTCTATATGAGAGATGTATGGGTAAGCACTGGTGAATCGCCAACAGTATTTAGATATATTGATTGGATATTAACTGTGCCACTACAAATGATTGAATTCTACTTAATACTTGCAGCTGTAACTACAGTTAGCATAGGTGTATTCAACAGATTATTAGTTGGAACACTAGTCATGTTAATCGGTGGATATTTAGGTGAAGCGGGGGTTATCAACGCTATGCTTGGATTCATCATCGGGATGGCTGGCTGGTTATACATTCTATATGAAATATTTATGGGTGAAGCCGGACAAAAAAGCATGTCATGCGGAAGCGTAGGTGCACAAATGGCATTCAGCGCGTGTCGTATGATTGTATTAGTTGGATGGGCCATCTATCCA MLAATVFFYAERSRVSAKWQTSLSVISLVTLIAAVHYFYMRDVWVSTGESPTVFRYIDWILTVPLQMIEFYLILAAVTTVSIGVFNRLLVGTLVMLIGGYLGEAGVINAMLGFIIGMAGWLYILYEIFMGEAGQKSMSCGSVGAQMAFSACRMIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACTGTTTTCTTCTATGCAGAAAGATCAAGAGTTTCAGCT---AAATGGCAAACATCATTATCTGTAATATCATTGGTTACATTGATTGCTGCAGTACATTATTTCTATATGAGAGATGTATGGGTA------------------------------AGCACT---------------------GGTGAATCGCCAACAGTATTTAGATATATTGATTGG------------------------ATATTAACTGTGCCACTACAAATGATTGAATTCTACTTAATACTTGCAGCT---------GTA---ACTACAGTTAGCATA---GGTGTA------------------------------------TTCAACAGA---TTATTAGTTGGAACACTAGTCATGTTAATCGGTGGATATTTAGGTGAA---------GCG------------------GGG------GTT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ATGCTTGGA---TTCATCATCGGGATGGCTGGCTGGTTATACATTCTATATGAAATA---------------TTT------ATG---GGTGAAGCCGGACAAAAAAGCATGTCA------TGC---GGAAGCGTAGGTGCA---CAA---ATG---GCA---TTC---AGC---GCGTGT---CGTATGATTGTATTAGTT---------------------------------------------------------------GGATGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFYAERSRVSA-KWQTSLSVISLVTLIAAVHYFYMRDVWV----------ST-------GESPTVFRYIDW--------ILTVPLQMIEFYLILAA---V-TTVSI-GV------------FNR-LLVGTLVMLIGGYLGE---A------G--V-----------I----------------------NA------MLG-FIIGMAGWLYILYEI-----F--M-GEAGQKSMS--C-GSVGA-Q-M-A-F-S-AC-RMIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-env6-b]_EF088566 [I-env6-b] clone_AT37013_EF088566 gi|126843371|gb|EF088566| Uncultured bacterium clone AT37013 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT37013 putative proteorhodopsin gene, partial cds. EF088566 [[proteorhodopsin super-cluster I/env cluster 6/B subcluster]] proteorhodopsin super-cluster I env cluster 6 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na surface water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGCTGGCCGCTACTGCTTTCTTCTATGCAGAAAGATCACGAGTTTCAGCTAAATGGCAGACATCATTATCTGTAATATCATTGGTTACACTGATTGCTGCAGTACATTATTTCTATATGAGAGATGTATGGGTAAGCACAGGAGAATCACCAACAGTATTTAGATATATTGATTGGATATTAACTGTCCCACTACAAATGATTGAATTCTACTTAATACTTGCAGCTGTAACTACAGTTAGCGTAGGTGTATTCAACAGACTATTAGTAGGAACACTAGTCATGCTTATAGGTGGATATTTAGGTGAAGCGGGGGTTATCAACGCTATGCTTGGATTCATCATCGGGATGGCGGGCTGGATATACATTCTATATGAAATATTTATGGGTGAAGCATCACAAAAAAGTATTTCATGCGGAAGCGTCGGTGCTCAAATGGCATTCAGCGCATGTCGTATGGTTGTATTAGTTGGTTGGGCAATATACCCA MLAATAFFYAERSRVSAKWQTSLSVISLVTLIAAVHYFYMRDVWVSTGESPTVFRYIDWILTVPLQMIEFYLILAAVTTVSVGVFNRLLVGTLVMLIGGYLGEAGVINAMLGFIIGMAGWIYILYEIFMGEASQKSISCGSVGAQMAFSACRMVVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGCTTTCTTCTATGCAGAAAGATCACGAGTTTCAGCT---AAATGGCAGACATCATTATCTGTAATATCATTGGTTACACTGATTGCTGCAGTACATTATTTCTATATGAGAGATGTATGGGTA------------------------------AGCACA---------------------GGAGAATCACCAACAGTATTTAGATATATTGATTGG------------------------ATATTAACTGTCCCACTACAAATGATTGAATTCTACTTAATACTTGCAGCT---------GTA---ACTACAGTTAGCGTA---GGTGTA------------------------------------TTCAACAGA---CTATTAGTAGGAACACTAGTCATGCTTATAGGTGGATATTTAGGTGAA---------GCG------------------GGG------GTT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ATGCTTGGA---TTCATCATCGGGATGGCGGGCTGGATATACATTCTATATGAAATA---------------TTT------ATG---GGTGAAGCATCACAAAAAAGTATTTCA------TGC---GGAAGCGTCGGTGCT---CAA---ATG---GCA---TTC---AGC---GCATGT---CGTATGGTTGTATTAGTT---------------------------------------------------------------GGTTGG---------GCAATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFYAERSRVSA-KWQTSLSVISLVTLIAAVHYFYMRDVWV----------ST-------GESPTVFRYIDW--------ILTVPLQMIEFYLILAA---V-TTVSV-GV------------FNR-LLVGTLVMLIGGYLGE---A------G--V-----------I----------------------NA------MLG-FIIGMAGWIYILYEI-----F--M-GEASQKSIS--C-GSVGA-Q-M-A-F-S-AC-RMVVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-env6-b]_DQ062249 [I-env6-b] clone_MEDPR13K09_complete_DQ062249 gi|67483443|gb|DQ062249| Uncultured bacterium clone MEDPR13K09 proteorhodopsin gene, complete cds Uncultured bacterium clone MEDPR13K09 proteorhodopsin gene, complete cds DQ062249 [[proteorhodopsin super-cluster I/env cluster 6/B subcluster]] proteorhodopsin super-cluster I env cluster 6 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na ATGAGGAATATTATGTCTTATGTATTCTCATTATTATTCGTAGTTTCCATGCCATCAATTGCGTTAGCTGGAGATCTTCAGGCGAATGATTTTGTAGGGGTTACATTCTGGATAATTTCAATTTCCATGGTTGCAGCTACAGTGTTCTTTTATGCAGAAAGATCACGAGTTTCAGCTAAATGGCAGACATCATTATCTGTAATATCATTGGTTACACTGATTGCTGCAGTACATTATTTCTATATGAGAGATGTATGGGTAAGCACAGGAGAATCACCAACAGTATTTAGATATATTGATTGGATATTAACTGTCCCACTACAAATGATTGAATTCTACTTAATACTTGCAGCTGTAACTACAGTTAGCGTAGGCGTATTCAACAGACTGTTAGTAGGAACATTAGTCATGCTTATAGGTGGATATTTAGGTGAAGCGGGGGTTATCAACGCTATGCTTGGATTCATCATCGGGATGGCGGGCTGGATATACATTCTATATGAAATATTTATGGGTGAAGCATCACAAAAAAGTATTTCATGCGGAAGCGTAGGTGCACAAATGGCATTCAGCGCATGTCGTATGGTTGTATTAGTTGGTTGGGCGATCTATCCTCTTGGATACCTATTCGGATATCTAATGGGCGCAGTAGACGCAGCCAGCTTAAACTTAGTATACAACTTAGCTGATTTTGTAAACAAAATCGCATTTGGTGTATTTATCTGGGCAGCTGCGGTAGCAGATTCTCAAGAAACAGCT MRNIMSYVFSLLFVVSMPSIALAGDLQANDFVGVTFWIISISMVAATVFFYAERSRVSAKWQTSLSVISLVTLIAAVHYFYMRDVWVSTGESPTVFRYIDWILTVPLQMIEFYLILAAVTTVSVGVFNRLLVGTLVMLIGGYLGEAGVINAMLGFIIGMAGWIYILYEIFMGEASQKSISCGSVGAQMAFSACRMVVLVGWAIYPLGYLFGYLMGAVDAASLNLVYNLADFVNKIAFGVFIWAAAVADSQETA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAGGAATATTATGTCTTATGTATTCTCATTATTATTCGTAGTTTCCATGCCATCAATTGCGTTAGCTGGAGATCTTCAGGCGAATGATTTTGTAGGGGTTACATTCTGGATAATTTCAATTTCCATGGTTGCAGCTACAGTGTTCTTTTATGCAGAAAGATCACGAGTTTCAGCT---AAATGGCAGACATCATTATCTGTAATATCATTGGTTACACTGATTGCTGCAGTACATTATTTCTATATGAGAGATGTATGGGTA------------------------------AGCACA---------------------GGAGAATCACCAACAGTATTTAGATATATTGATTGG------------------------ATATTAACTGTCCCACTACAAATGATTGAATTCTACTTAATACTTGCAGCT---------GTA---ACTACAGTTAGCGTA---GGCGTA------------------------------------TTCAACAGA---CTGTTAGTAGGAACATTAGTCATGCTTATAGGTGGATATTTAGGTGAA---------GCG------------------GGG------GTT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ATGCTTGGA---TTCATCATCGGGATGGCGGGCTGGATATACATTCTATATGAAATA---------------TTT------ATG---GGTGAAGCATCACAAAAAAGTATTTCA------TGC---GGAAGCGTAGGTGCA---CAA---ATG---GCA---TTC---AGC---GCATGT---CGTATGGTTGTATTAGTT---------------------------------------------------------------GGTTGG---------GCGATCTATCCTCTTGGATACCTATTCGGATATCTA---------------------------------------ATGGGCGCAGTAGACGCAGCCAGCTTAAACTTAGTATACAACTTAGCTGATTTTGTAAACAAAATCGCATTTGGTGTATTTATCTGGGCAGCTGCGGTAGCAGAT---TCTCAAGAAACAGCT------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------MRNIMSYVFSLLFVVSMPSIALAGDLQANDFVGVTFWIISISMVAATVFFYAERSRVSA-KWQTSLSVISLVTLIAAVHYFYMRDVWV----------ST-------GESPTVFRYIDW--------ILTVPLQMIEFYLILAA---V-TTVSV-GV------------FNR-LLVGTLVMLIGGYLGE---A------G--V-----------I----------------------NA------MLG-FIIGMAGWIYILYEI-----F--M-GEASQKSIS--C-GSVGA-Q-M-A-F-S-AC-RMVVLV---------------------GW---AIYPLGYLFGYL-------------MGAVDAASLNLVYNLADFVNKIAFGVFIWAAAVAD-SQETA------------------------------------ [I-env6-b]_DQ062293 [I-env6-b] REDPR22E04_env_samples_DQ062293 gi|67483531|gb|DQ062293| Uncultured bacterium clone REDPR22E04 proteorhodopsin gene, partial cds Uncultured bacterium clone REDPR22E04 proteorhodopsin gene, partial cds DQ062293 [[proteorhodopsin super-cluster I/env cluster 6/B subcluster]] proteorhodopsin super-cluster I env cluster 6 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 May 2002 7_m_coastal_water_from_the_Red_Sea/from_the_dock_at_the_Interuniversity_Institute_for_Matine_Science_in_Eilat Red Sea marine 29.5 34.92 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na AGATACATAGACTGGCTATTAACTGTACCGTTACAAATGATCGAATTCTATTTGATACTAGCTGCTGTTACAACAGTTAGTGCAGGTGTATTCAATAGACTGCTTGTAGGTACACTAGTCATGCTGATTGGTGGTTACTTAGGTGAAGCTGGAGTCATCAATGCGATGCTTGGATTCATCATTGGGATGGCAGGCTGGATATACATTCTGTATGAAATCTTTGCTGGTGAAGCAGGACAAAAAAGTACGTCTTGTGGAAGCGTGGGTGCGCAAATGGCATTCAACGCATGTCGTATGATCGTATTAGTCGGTTGGGCTATTTATCCA RYIDWLLTVPLQMIEFYLILAAVTTVSAGVFNRLLVGTLVMLIGGYLGEAGVINAMLGFIIGMAGWIYILYEIFAGEAGQKSTSCGSVGAQMAFNACRMIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTATTAACTGTACCGTTACAAATGATCGAATTCTATTTGATACTAGCTGCT---------GTT---ACAACAGTTAGTGCA---GGTGTA------------------------------------TTCAATAGA---CTGCTTGTAGGTACACTAGTCATGCTGATTGGTGGTTACTTAGGTGAA---------GCT------------------GGA------GTC---------------------------------ATC------------------------------------------------------------------AATGCG------------------ATGCTTGGA---TTCATCATTGGGATGGCAGGCTGGATATACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCAGGACAAAAAAGTACGTCT------TGT---GGAAGCGTGGGTGCG---CAA---ATG---GCA---TTC---AAC---GCATGT---CGTATGATCGTATTAGTC---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQMIEFYLILAA---V-TTVSA-GV------------FNR-LLVGTLVMLIGGYLGE---A------G--V-----------I----------------------NA------MLG-FIIGMAGWIYILYEI-----F--A-GEAGQKSTS--C-GSVGA-Q-M-A-F-N-AC-RMIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-env6-b]_EF100799 [I-env6-b] clone_ID29025_EF100799 gi|126513377|gb|EF100799| Uncultured bacterium clone ID29025 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID29025 putative proteorhodopsin gene, partial cds. EF100799 [[proteorhodopsin super-cluster I/env cluster 6/B subcluster]] proteorhodopsin super-cluster I env cluster 6 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-nov-07 #na surface water Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGCTTGCCGCTACTGTGTTCTTCTTCTCTGAAAGATCTAGAGTGTCAGCTAAATGGCAAACATCGTTATCAGTCATATCACTAGTAACGCTTATTGCAGCCGTTCATTATTTCTATATGAGAGAAGTTTGGGTTGAAACAGGTGAATCTCCAACTGTATTTAGATACATTGATTGGATATTAACTGTACCGTTACAAATGATCGAATTCTATTTGATACTAGCTGCTGTTACAACAGTTAGTGCAGGTGTATTCAATAGACTGCTTGTAGGTACACTAGTCATGTTGATTGGTGGTTACTTAGGTGAAGCTGGAGTCATCAATGCGATGCTTGGATTCATCATTGGAATGGCAGGCTGGATATACATTCTGTATGAAATCTTTGCTGGTGAAGCAGGACAAAAAAGTACGTCTTGTGGAAGCGTGGGTGCGCAAATGGTATTCAACGCATGTCGTATGATCGTATTAGTCGGATGGGCAATATATCCA MLAATVFFFSERSRVSAKWQTSLSVISLVTLIAAVHYFYMREVWVETGESPTVFRYIDWILTVPLQMIEFYLILAAVTTVSAGVFNRLLVGTLVMLIGGYLGEAGVINAMLGFIIGMAGWIYILYEIFAGEAGQKSTSCGSVGAQMVFNACRMIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACTGTGTTCTTCTTCTCTGAAAGATCTAGAGTGTCAGCT---AAATGGCAAACATCGTTATCAGTCATATCACTAGTAACGCTTATTGCAGCCGTTCATTATTTCTATATGAGAGAAGTTTGGGTT------------------------------GAAACA---------------------GGTGAATCTCCAACTGTATTTAGATACATTGATTGG------------------------ATATTAACTGTACCGTTACAAATGATCGAATTCTATTTGATACTAGCTGCT---------GTT---ACAACAGTTAGTGCA---GGTGTA------------------------------------TTCAATAGA---CTGCTTGTAGGTACACTAGTCATGTTGATTGGTGGTTACTTAGGTGAA---------GCT------------------GGA------GTC---------------------------------ATC------------------------------------------------------------------AATGCG------------------ATGCTTGGA---TTCATCATTGGAATGGCAGGCTGGATATACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCAGGACAAAAAAGTACGTCT------TGT---GGAAGCGTGGGTGCG---CAA---ATG---GTA---TTC---AAC---GCATGT---CGTATGATCGTATTAGTC---------------------------------------------------------------GGATGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFSERSRVSA-KWQTSLSVISLVTLIAAVHYFYMREVWV----------ET-------GESPTVFRYIDW--------ILTVPLQMIEFYLILAA---V-TTVSA-GV------------FNR-LLVGTLVMLIGGYLGE---A------G--V-----------I----------------------NA------MLG-FIIGMAGWIYILYEI-----F--A-GEAGQKSTS--C-GSVGA-Q-M-V-F-N-AC-RMIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-env6-b]_DQ062248 [I-env6-b] MEDPR13E07_env_samples_DQ062248 gi|67483441|gb|DQ062248| Uncultured bacterium clone MEDPR13E07 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR13E07 proteorhodopsin gene, partial cds DQ062248 [[proteorhodopsin super-cluster I/env cluster 6/B subcluster]] proteorhodopsin super-cluster I env cluster 6 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na AGATACATTGACTGGCTATTAACTGTGCCGTTACAAATGATTGAATTCTATTTAATCCTAGCAGCTGTAACAACTGTTAGCGTAGGCGTATTCAACAGATTACTTGTTGGTACACTTGTAATGTTAATCGGTGGTTACTTAGGTGAAGCAGGTATTATAAATGCAATGCTTGGTTTCATTATCGGGATGGCTGGCTGGATATACATTTTATATGAAATCTTTGCTGGTGAAGCAGGACAGAAAAGTGTGTCTTGCGGAAGCGTGGGTGCTCAAATGGCATTCAACGCATGTCGTATGATCGTATTAGTCGGTTGGGCGATTTATCCA RYIDWLLTVPLQMIEFYLILAAVTTVSVGVFNRLLVGTLVMLIGGYLGEAGIINAMLGFIIGMAGWIYILYEIFAGEAGQKSVSCGSVGAQMAFNACRMIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTATTAACTGTGCCGTTACAAATGATTGAATTCTATTTAATCCTAGCAGCT---------GTA---ACAACTGTTAGCGTA---GGCGTA------------------------------------TTCAACAGA---TTACTTGTTGGTACACTTGTAATGTTAATCGGTGGTTACTTAGGTGAA---------GCA------------------GGT------ATT---------------------------------ATA------------------------------------------------------------------AATGCA------------------ATGCTTGGT---TTCATTATCGGGATGGCTGGCTGGATATACATTTTATATGAAATC---------------TTT------GCT---GGTGAAGCAGGACAGAAAAGTGTGTCT------TGC---GGAAGCGTGGGTGCT---CAA---ATG---GCA---TTC---AAC---GCATGT---CGTATGATCGTATTAGTC---------------------------------------------------------------GGTTGG---------GCGATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQMIEFYLILAA---V-TTVSV-GV------------FNR-LLVGTLVMLIGGYLGE---A------G--I-----------I----------------------NA------MLG-FIIGMAGWIYILYEI-----F--A-GEAGQKSVS--C-GSVGA-Q-M-A-F-N-AC-RMIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-env6-b]_DQ203348 [I-env6-b] MedHO102A5_env_samples_DQ203348 gi|77547144|gb|DQ203348| Uncultured bacterium clone MedHO102A5 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102A5 predicted proteorhodopsin gene, partial cds DQ203348 [[proteorhodopsin super-cluster I/env cluster 6/B subcluster]] proteorhodopsin super-cluster I env cluster 6 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGATTGGCTACTTACAGTTCCATTATTAATGATCGAATTCTATTTCATACTTGCAGCTGTTACAGCTGTATCAGTAGGTATATTCTGGAGATTATTAATAGGTACTTTAGTGATGCTAGTAGGTGGATACTTAGGTGAAGCTGGAATAATATCAGCAATGCTAGGATTCATTATAGGAATGGCTGGCTGGATATACATTCTATATGAAATCTTTGCTGGTGAAGCAGCACAAAAATCTGAGTCTTGTGGAAGCGCAGGCGCTCAAATGGCATTCAATGCTTGTCGTACAATCGTATTAGTTGGCTGGGCAATCTACCCA RYIDWLLTVPLLMIEFYFILAAVTAVSVGIFWRLLIGTLVMLVGGYLGEAGIISAMLGFIIGMAGWIYILYEIFAGEAAQKSESCGSAGAQMAFNACRTIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGATTGG------------------------CTACTTACAGTTCCATTATTAATGATCGAATTCTATTTCATACTTGCAGCT---------GTT---ACAGCTGTATCAGTA---GGTATA------------------------------------TTCTGGAGA---TTATTAATAGGTACTTTAGTGATGCTAGTAGGTGGATACTTAGGTGAA---------GCT------------------GGA------ATA---------------------------------ATA------------------------------------------------------------------TCAGCA------------------ATGCTAGGA---TTCATTATAGGAATGGCTGGCTGGATATACATTCTATATGAAATC---------------TTT------GCT---GGTGAAGCAGCACAAAAATCTGAGTCT------TGT---GGAAGCGCAGGCGCT---CAA---ATG---GCA---TTC---AAT---GCTTGT---CGTACAATCGTATTAGTT---------------------------------------------------------------GGCTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYFILAA---V-TAVSV-GI------------FWR-LLIGTLVMLVGGYLGE---A------G--I-----------I----------------------SA------MLG-FIIGMAGWIYILYEI-----F--A-GEAAQKSES--C-GSAGA-Q-M-A-F-N-AC-RTIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-env6-b]_DQ203379 [I-env6-b] MedHO102D3_env_samples_DQ203379 gi|77547206|gb|DQ203379| Uncultured bacterium clone MedHO102D3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102D3 predicted proteorhodopsin gene, partial cds DQ203379 [[proteorhodopsin super-cluster I/env cluster 6/B subcluster]] proteorhodopsin super-cluster I env cluster 6 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGATTGGCTACTTACAGTTCCATTATTAATGATCGAATTCTATTTCATACTTGCAGCTGTTACAGCTGTATCAGTAGGTATATTCTGGAGATTATTAATAGGTACTTTAGTGATGCTAGTAGGTGGATACTTAGGTGAAGCTGGAATAATATCAGCAATGCTAGGATTCATTATAGGAATGGCTGGCTGGATATACATTCTATATGAAATCTTTGCTGGTGAAGCAGCACAAAAATCTGAGTCTTGTGGAAGCGCAGGCGCTCAAATGGCATTCAATGCTTGTCGTACAATCGTATTAGTTGGCTGGGCCATATACCCA RYIDWLLTVPLLMIEFYFILAAVTAVSVGIFWRLLIGTLVMLVGGYLGEAGIISAMLGFIIGMAGWIYILYEIFAGEAAQKSESCGSAGAQMAFNACRTIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGATTGG------------------------CTACTTACAGTTCCATTATTAATGATCGAATTCTATTTCATACTTGCAGCT---------GTT---ACAGCTGTATCAGTA---GGTATA------------------------------------TTCTGGAGA---TTATTAATAGGTACTTTAGTGATGCTAGTAGGTGGATACTTAGGTGAA---------GCT------------------GGA------ATA---------------------------------ATA------------------------------------------------------------------TCAGCA------------------ATGCTAGGA---TTCATTATAGGAATGGCTGGCTGGATATACATTCTATATGAAATC---------------TTT------GCT---GGTGAAGCAGCACAAAAATCTGAGTCT------TGT---GGAAGCGCAGGCGCT---CAA---ATG---GCA---TTC---AAT---GCTTGT---CGTACAATCGTATTAGTT---------------------------------------------------------------GGCTGG---------GCCATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYFILAA---V-TAVSV-GI------------FWR-LLIGTLVMLVGGYLGE---A------G--I-----------I----------------------SA------MLG-FIIGMAGWIYILYEI-----F--A-GEAAQKSES--C-GSAGA-Q-M-A-F-N-AC-RTIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-env6-b]_DQ203494 [I-env6-b] MedHO1202A12_env_samples_DQ203494 gi|77547436|gb|DQ203494| Uncultured bacterium clone MedHO1202A12 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202A12 predicted proteorhodopsin gene, partial cds DQ203494 [[proteorhodopsin super-cluster I/env cluster 6/B subcluster]] proteorhodopsin super-cluster I env cluster 6 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTATATTGATTGGCTACTTACAGTTCCATTATTAATGATCGAATTCTATTTCATACTTGCAGCTGTTACAGCTGTATCAGTAGGTATATTCTGGAGATTATTAATAGGTACTTTAGTGATGCTAGTAGGTGGATACTTAGGTGAAGCTGGAATAATATCAGCAATGCTAGGATTCATTATAGGAATGGCTGGCTGGATATACATTCTATATGAAATCTTTGCTGGTGAAGCAGCACAAAAATCTGAGTCTTGTGGAAGCGCAGGCGCTCAAATGGCATTCAATGCTTGTCGTACAATCGTTTTAGTTGGCTGGGCAATATACCCA RYIDWLLTVPLLMIEFYFILAAVTAVSVGIFWRLLIGTLVMLVGGYLGEAGIISAMLGFIIGMAGWIYILYEIFAGEAAQKSESCGSAGAQMAFNACRTIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTATATTGATTGG------------------------CTACTTACAGTTCCATTATTAATGATCGAATTCTATTTCATACTTGCAGCT---------GTT---ACAGCTGTATCAGTA---GGTATA------------------------------------TTCTGGAGA---TTATTAATAGGTACTTTAGTGATGCTAGTAGGTGGATACTTAGGTGAA---------GCT------------------GGA------ATA---------------------------------ATA------------------------------------------------------------------TCAGCA------------------ATGCTAGGA---TTCATTATAGGAATGGCTGGCTGGATATACATTCTATATGAAATC---------------TTT------GCT---GGTGAAGCAGCACAAAAATCTGAGTCT------TGT---GGAAGCGCAGGCGCT---CAA---ATG---GCA---TTC---AAT---GCTTGT---CGTACAATCGTTTTAGTT---------------------------------------------------------------GGCTGG---------GCAATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYFILAA---V-TAVSV-GI------------FWR-LLIGTLVMLVGGYLGE---A------G--I-----------I----------------------SA------MLG-FIIGMAGWIYILYEI-----F--A-GEAAQKSES--C-GSAGA-Q-M-A-F-N-AC-RTIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-env6-b]_DQ203496 [I-env6-b] MedHO1202A3_env_samples_DQ203496 gi|77547440|gb|DQ203496| Uncultured bacterium clone MedHO1202A3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202A3 predicted proteorhodopsin gene, partial cds DQ203496 [[proteorhodopsin super-cluster I/env cluster 6/B subcluster]] proteorhodopsin super-cluster I env cluster 6 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATAGATTGGCTACTTACAGTTCCATTATTAATGATCGAATTCTATTTCATACTTGCAGCTGTTACAGCTGTATCAGTAGGTATATTCTGGAGATTATTAATAGGTACTTTAGTGATGCTAGTAGGTGGATACTTAGGTGAAGCTGGAATAATATCAGCAATGCTAGGATTCATTATAGGAATGGCTGGCTGGATATACATTCTATATGAAATCTTTGCTGGTGAAGCAGCACAAAAATCTGAGTCTTGTGGAAGCGCAGGCGCTCAAATGGCATTCAATGCTTGTCGTACAATCGTTTTAGTTGGCTGGGCAATATATCCA RYIDWLLTVPLLMIEFYFILAAVTAVSVGIFWRLLIGTLVMLVGGYLGEAGIISAMLGFIIGMAGWIYILYEIFAGEAAQKSESCGSAGAQMAFNACRTIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGATTGG------------------------CTACTTACAGTTCCATTATTAATGATCGAATTCTATTTCATACTTGCAGCT---------GTT---ACAGCTGTATCAGTA---GGTATA------------------------------------TTCTGGAGA---TTATTAATAGGTACTTTAGTGATGCTAGTAGGTGGATACTTAGGTGAA---------GCT------------------GGA------ATA---------------------------------ATA------------------------------------------------------------------TCAGCA------------------ATGCTAGGA---TTCATTATAGGAATGGCTGGCTGGATATACATTCTATATGAAATC---------------TTT------GCT---GGTGAAGCAGCACAAAAATCTGAGTCT------TGT---GGAAGCGCAGGCGCT---CAA---ATG---GCA---TTC---AAT---GCTTGT---CGTACAATCGTTTTAGTT---------------------------------------------------------------GGCTGG---------GCAATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYFILAA---V-TAVSV-GI------------FWR-LLIGTLVMLVGGYLGE---A------G--I-----------I----------------------SA------MLG-FIIGMAGWIYILYEI-----F--A-GEAAQKSES--C-GSAGA-Q-M-A-F-N-AC-RTIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-env6-b]_DQ203478 [I-env6-b] medHO10G10_env_samples_DQ203478 gi|77547404|gb|DQ203478| Uncultured bacterium clone medHO10G10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10G10 predicted proteorhodopsin gene, partial cds DQ203478 [[proteorhodopsin super-cluster I/env cluster 6/B subcluster]] proteorhodopsin super-cluster I env cluster 6 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATATATTGATTGGCTACTTACAGTTCCATTATTAATGATCGAATTCTATTTCATACTTGCAGCTGTTACAGCTGTATCAGTAGGTATATTCTGGAGATTATTAATAGGTACTTTAGTGATGCTAGTAGGTGGATACTTAGGTGAAGCTGGAATAATATCAGCAATGCTAGGATTCATTATAGGAATGGCTGGCTGGATATACATTCTATATGAAATCTTTGCTGGTGAAGCAGCACAAAAATCTGAGTCTTGTGGAAGCGCAGGCGCTCAAATGGCATTCAATGCTTGTCGTACAATCGTATTAGTTGGCTGGGCAATTTATCCA RYIDWLLTVPLLMIEFYFILAAVTAVSVGIFWRLLIGTLVMLVGGYLGEAGIISAMLGFIIGMAGWIYILYEIFAGEAAQKSESCGSAGAQMAFNACRTIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATATATTGATTGG------------------------CTACTTACAGTTCCATTATTAATGATCGAATTCTATTTCATACTTGCAGCT---------GTT---ACAGCTGTATCAGTA---GGTATA------------------------------------TTCTGGAGA---TTATTAATAGGTACTTTAGTGATGCTAGTAGGTGGATACTTAGGTGAA---------GCT------------------GGA------ATA---------------------------------ATA------------------------------------------------------------------TCAGCA------------------ATGCTAGGA---TTCATTATAGGAATGGCTGGCTGGATATACATTCTATATGAAATC---------------TTT------GCT---GGTGAAGCAGCACAAAAATCTGAGTCT------TGT---GGAAGCGCAGGCGCT---CAA---ATG---GCA---TTC---AAT---GCTTGT---CGTACAATCGTATTAGTT---------------------------------------------------------------GGCTGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYFILAA---V-TAVSV-GI------------FWR-LLIGTLVMLVGGYLGE---A------G--I-----------I----------------------SA------MLG-FIIGMAGWIYILYEI-----F--A-GEAAQKSES--C-GSAGA-Q-M-A-F-N-AC-RTIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-env6-b]_DQ203371 [I-env6-b] MedHO102C7_env_samples_DQ203371 gi|77547190|gb|DQ203371| Uncultured bacterium clone MedHO102C7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102C7 predicted proteorhodopsin gene, partial cds DQ203371 [[proteorhodopsin super-cluster I/env cluster 6/B subcluster]] proteorhodopsin super-cluster I env cluster 6 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGATTGGCTACTTACAGTTCCATTATTAATGATCGAATTCTATTTCATACTTGCAGCTGTTACAGCTGTATCAGTAGGTATATTCTGGAGATTATTAATAGGTACTTTAGTGATGCTAGTAGGTGGATACTTAGGTGAAGCTGGAATAATATCAGCAATGCTAGGATTCATTATAGGAATGGCTGGCTGGATATACATTCTATATGAAATCTTTGCTGGTGAAGCAGCACAAAAATCTGAGTCTTGTGGAAGCGCAGGCGCTCAAATGGCATTCAATGCTTGTCGTACAATCGTTTTAGTTGGCTGGGCAATTTATCCA RYIDWLLTVPLLMIEFYFILAAVTAVSVGIFWRLLIGTLVMLVGGYLGEAGIISAMLGFIIGMAGWIYILYEIFAGEAAQKSESCGSAGAQMAFNACRTIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGATTGG------------------------CTACTTACAGTTCCATTATTAATGATCGAATTCTATTTCATACTTGCAGCT---------GTT---ACAGCTGTATCAGTA---GGTATA------------------------------------TTCTGGAGA---TTATTAATAGGTACTTTAGTGATGCTAGTAGGTGGATACTTAGGTGAA---------GCT------------------GGA------ATA---------------------------------ATA------------------------------------------------------------------TCAGCA------------------ATGCTAGGA---TTCATTATAGGAATGGCTGGCTGGATATACATTCTATATGAAATC---------------TTT------GCT---GGTGAAGCAGCACAAAAATCTGAGTCT------TGT---GGAAGCGCAGGCGCT---CAA---ATG---GCA---TTC---AAT---GCTTGT---CGTACAATCGTTTTAGTT---------------------------------------------------------------GGCTGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYFILAA---V-TAVSV-GI------------FWR-LLIGTLVMLVGGYLGE---A------G--I-----------I----------------------SA------MLG-FIIGMAGWIYILYEI-----F--A-GEAAQKSES--C-GSAGA-Q-M-A-F-N-AC-RTIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-env6-b]_DQ203458 [I-env6-b] medHO10C8_env_samples_DQ203458 gi|77547364|gb|DQ203458| Uncultured bacterium clone medHO10C8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO10C8 predicted proteorhodopsin gene, partial cds DQ203458 [[proteorhodopsin super-cluster I/env cluster 6/B subcluster]] proteorhodopsin super-cluster I env cluster 6 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGATTGGCTACTTACAGTTCCATTATTAATGATCGAATTCTATTTCATACTTGCAGCTGTTACAGCTGTATCAGTAGGTATATTCTGGAGATTATTAATAGGTACTTTAGTGATGCTAGTAGGTGGATACTTAGGTGAAGCTGGAATAATATCAGCAATGCTAGGATTCATTATAGGAATGGCTGGCTGGATATACATTCTATATGAAATCTTTGCTGGTGAAGCAGCACAAAAATCTGAGTCTTGTGGAAGCGCAGGCGCTCAAATGGCATTCAATGCTTGTCGTACAATCGTATTAGTTGGTTGGGCAATCTACCCA RYIDWLLTVPLLMIEFYFILAAVTAVSVGIFWRLLIGTLVMLVGGYLGEAGIISAMLGFIIGMAGWIYILYEIFAGEAAQKSESCGSAGAQMAFNACRTIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGATTGG------------------------CTACTTACAGTTCCATTATTAATGATCGAATTCTATTTCATACTTGCAGCT---------GTT---ACAGCTGTATCAGTA---GGTATA------------------------------------TTCTGGAGA---TTATTAATAGGTACTTTAGTGATGCTAGTAGGTGGATACTTAGGTGAA---------GCT------------------GGA------ATA---------------------------------ATA------------------------------------------------------------------TCAGCA------------------ATGCTAGGA---TTCATTATAGGAATGGCTGGCTGGATATACATTCTATATGAAATC---------------TTT------GCT---GGTGAAGCAGCACAAAAATCTGAGTCT------TGT---GGAAGCGCAGGCGCT---CAA---ATG---GCA---TTC---AAT---GCTTGT---CGTACAATCGTATTAGTT---------------------------------------------------------------GGTTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLMIEFYFILAA---V-TAVSV-GI------------FWR-LLIGTLVMLVGGYLGE---A------G--I-----------I----------------------SA------MLG-FIIGMAGWIYILYEI-----F--A-GEAAQKSES--C-GSAGA-Q-M-A-F-N-AC-RTIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-env6-b]_FJ560863 [I-env6-b] HEL153_env_samples_FJ560863 gi|223868873|gb|FJ560863| Uncultured microorganism clone HEL153 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL153 putative proteorhodopsin gene, partial cds FJ560863 [[proteorhodopsin super-cluster I/env cluster 6/B subcluster]] proteorhodopsin super-cluster I env cluster 6 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTTCCATTACTAATGATCGAATTCTATTTCATACTTGCAGCTGTTACAGCTGTGTCAGTAGGCATATTCTGGAGATTATTAATTGGTACTTTAGTGATGCTAGTAGGTGGATACTTAGGCGAAGCTGGAATAATATCAGCAATGCTAGGATTCATTATCGGAATGGCTGGCTGGATATACATTCTATATGAAATCTTCGCTGGTGAAGCAGCGCAAAAATCTGAGTCTTGCGGAAGCGCAGGTGCTCAAATGGCATTCAATGCTTGTCGTACA TVPLLMIEFYFILAAVTAVSVGIFWRLLIGTLVMLVGGYLGEAGIISAMLGFIIGMAGWIYILYEIFAGEAAQKSESCGSAGAQMAFNACRT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTTCCATTACTAATGATCGAATTCTATTTCATACTTGCAGCT---------GTT---ACAGCTGTGTCAGTA---GGCATA------------------------------------TTCTGGAGA---TTATTAATTGGTACTTTAGTGATGCTAGTAGGTGGATACTTAGGCGAA---------GCT------------------GGA------ATA---------------------------------ATA------------------------------------------------------------------TCAGCA------------------ATGCTAGGA---TTCATTATCGGAATGGCTGGCTGGATATACATTCTATATGAAATC---------------TTC------GCT---GGTGAAGCAGCGCAAAAATCTGAGTCT------TGC---GGAAGCGCAGGTGCT---CAA---ATG---GCA---TTC---AAT---GCTTGT---CGTACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMIEFYFILAA---V-TAVSV-GI------------FWR-LLIGTLVMLVGGYLGE---A------G--I-----------I----------------------SA------MLG-FIIGMAGWIYILYEI-----F--A-GEAAQKSES--C-GSAGA-Q-M-A-F-N-AC-RT------------------------------------------------------------------------------------------------------------------------------------ [I-env6-b]_DQ203761 [I-env6-b] SS114a0D2_env_samples_DQ203761 gi|77547970|gb|DQ203761| Uncultured bacterium clone SS114a0D2 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0D2 predicted proteorhodopsin gene, partial cds DQ203761 [[proteorhodopsin super-cluster I/env cluster 6/B subcluster]] proteorhodopsin super-cluster I env cluster 6 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGCTATATTGACTGGCTATTAACAGTACCACTACAAATGGTAGAGTTCTACTTAATACTTGCAGCTGTAACTGCAGTTTCAGTTGGAGTATTCTGGCGTTTACTAATAGGTACGCTTGTAATGTTATTTGGTGGATTCGCTGGTGAAGCAGGAATTATGAGCCACATGACAGGTTTCATTATCGGGATGATCGGTTGGATATATATCTTATATGAAATTTTTGCAGGTGAAGCTGGTAAAACAAATGCTAACAGTGGAAATGCTGCATGTCAGATGGCATTCTCAACTTGTAGATTAATTGTAACAATCGGTTGGGCTATCTATCCA SYIDWLLTVPLQMVEFYLILAAVTAVSVGVFWRLLIGTLVMLFGGFAGEAGIMSHMTGFIIGMIGWIYILYEIFAGEAGKTNANSGNAACQMAFSTCRLIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATATTGACTGG------------------------CTATTAACAGTACCACTACAAATGGTAGAGTTCTACTTAATACTTGCAGCT---------GTA---ACTGCAGTTTCAGTT---GGAGTA------------------------------------TTCTGGCGT---TTACTAATAGGTACGCTTGTAATGTTATTTGGTGGATTCGCTGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------AGCCAC------------------ATGACAGGT---TTCATTATCGGGATGATCGGTTGGATATATATCTTATATGAAATT---------------TTT------GCA---GGTGAAGCTGGTAAAACAAATGCTAAC------AGT---GGAAATGCTGCATGT---CAG---ATG---GCA---TTC---TCA---ACTTGT---AGATTAATTGTAACAATC---------------------------------------------------------------GGTTGG---------GCTATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LLTVPLQMVEFYLILAA---V-TAVSV-GV------------FWR-LLIGTLVMLFGGFAGE---A------G--I-----------M----------------------SH------MTG-FIIGMIGWIYILYEI-----F--A-GEAGKTNAN--S-GNAAC-Q-M-A-F-S-TC-RLIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-env6-b]_DQ203338 [I-env6-b] SS114a80G9_env_samples_DQ203338 gi|77547124|gb|DQ203338| Uncultured bacterium clone SS114a80G9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a80G9 predicted proteorhodopsin gene, partial cds DQ203338 [[proteorhodopsin super-cluster I/env cluster 6/B subcluster]] proteorhodopsin super-cluster I env cluster 6 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_80m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_2003 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGCTATTAACAGTACCACTACAAATGGTAGAATTCTACTTAATACTTGCAGCTGTAACTGCAGTTTCAGTTGGAGTATTCTGGCGTTTACTAATAGGTACGCTTGTAATGTTATTTGGTGGTTTCGCTGGTGAAGCAGGAATTATGAGCCACATGACAGGTTTCATTATCGGGATGATCGGTTGGATATACATCTTATATGAAATTTTTGCAGGTGAAGCTGGTAAAACAAATGCAAACAGTGGAAATGCTGCATGTCAGATGGCATTCTCAACTTGTAGATTAATTGTAACAATCGGTTGGGCCATATACCCA RYIDWLLTVPLQMVEFYLILAAVTAVSVGVFWRLLIGTLVMLFGGFAGEAGIMSHMTGFIIGMIGWIYILYEIFAGEAGKTNANSGNAACQMAFSTCRLIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTATTAACAGTACCACTACAAATGGTAGAATTCTACTTAATACTTGCAGCT---------GTA---ACTGCAGTTTCAGTT---GGAGTA------------------------------------TTCTGGCGT---TTACTAATAGGTACGCTTGTAATGTTATTTGGTGGTTTCGCTGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------AGCCAC------------------ATGACAGGT---TTCATTATCGGGATGATCGGTTGGATATACATCTTATATGAAATT---------------TTT------GCA---GGTGAAGCTGGTAAAACAAATGCAAAC------AGT---GGAAATGCTGCATGT---CAG---ATG---GCA---TTC---TCA---ACTTGT---AGATTAATTGTAACAATC---------------------------------------------------------------GGTTGG---------GCCATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQMVEFYLILAA---V-TAVSV-GV------------FWR-LLIGTLVMLFGGFAGE---A------G--I-----------M----------------------SH------MTG-FIIGMIGWIYILYEI-----F--A-GEAGKTNAN--S-GNAAC-Q-M-A-F-S-TC-RLIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-env6-b]_DQ339369 [I-env6-b] clone_S-S4OM-D12_DQ339369 gi|85681709|gb|DQ339369| Uncultured bacterium clone S-S4OM-D12 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-S4OM-D12 predicted proteorhodopsin gene, partial cds. DQ339369 [[proteorhodopsin super-cluster I/env cluster 6/B subcluster]] proteorhodopsin super-cluster I env cluster 6 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 40m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATAGACTGGCTATTAACAGTACCACTACAAATGGTAGAGTTCTACTTAATACTTGCAGCTGTAACTGCAGTTTCAGTTGGAGTATTCTGGCGTTTACTAATAGGTACGCTTGTAATGTTATTTGGTGGATTCGCTGGTGAAGCAGGAATTATGAGCCACATGTCAGGTTTCATTATCGGGATGATCGGTTGGATATACATCTTGTATGAAGTATTTGCAGGTGAAGCTGGTAAAACAAATGCTAATAGTGGAAATGCTGCATGTCAGATGGCATTCTCAACTTGTCGATTAATTATAACAATCGGTTGGGCCATTTATCCA RYIDWLLTVPLQMVEFYLILAAVTAVSVGVFWRLLIGTLVMLFGGFAGEAGIMSHMSGFIIGMIGWIYILYEVFAGEAGKTNANSGNAACQMAFSTCRLIITIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTATTAACAGTACCACTACAAATGGTAGAGTTCTACTTAATACTTGCAGCT---------GTA---ACTGCAGTTTCAGTT---GGAGTA------------------------------------TTCTGGCGT---TTACTAATAGGTACGCTTGTAATGTTATTTGGTGGATTCGCTGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------AGCCAC------------------ATGTCAGGT---TTCATTATCGGGATGATCGGTTGGATATACATCTTGTATGAAGTA---------------TTT------GCA---GGTGAAGCTGGTAAAACAAATGCTAAT------AGT---GGAAATGCTGCATGT---CAG---ATG---GCA---TTC---TCA---ACTTGT---CGATTAATTATAACAATC---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQMVEFYLILAA---V-TAVSV-GV------------FWR-LLIGTLVMLFGGFAGE---A------G--I-----------M----------------------SH------MSG-FIIGMIGWIYILYEV-----F--A-GEAGKTNAN--S-GNAAC-Q-M-A-F-S-TC-RLIITI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-env6-a]_KJ926128 [I-env6-a] BOUM_OTU041_env_samples gb|KJ926128| Uncultured bacterium clone BOUM OTU041 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU041 putative proteorhodopsin gene, partial cds KJ926128 [[proteorhodopsin super-cluster I/env cluster 6/A subcluster]] proteorhodopsin super-cluster I env cluster 6 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 38.6308 7.9097 #na #na #na #na #na GTAGACTGGTTACTAACTGTGCCTCTACAAATGATTGAATTCTACTTGATTTTAGCAGCGGTTACAGCTGTTTCTGCAGGAATATTCTGGAGACTATTAATAGGTACATTAGTAATGCTTGTTGGTGGTTTTGCAGGAGAGGCAGGAATGATGTCTGCAATGACAGGTTTCATCATAGGGATGATAGGTTGGTTATATATTCTTTACGAAATCTTTGCTGGTGAAGCAAGTAAAGCTAACGCGGCTAGCGGAAGTGCAGCATGTCAAACTGCTTTCGGTGCAATGCGTTTAATTGTTACAGTAGGCTGGGCAATTTAC VDWLLTVPLQMIEFYLILAAVTAVSAGIFWRLLIGTLVMLVGGFAGEAGMMSAMTGFIIGMIGWLYILYEIFAGEASKANAASGSAACQTAFGAMRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGACTGG------------------------TTACTAACTGTGCCTCTACAAATGATTGAATTCTACTTGATTTTAGCAGCG---------GTT---ACAGCTGTTTCTGCA---GGAATA------------------------------------TTCTGGAGA---CTATTAATAGGTACATTAGTAATGCTTGTTGGTGGTTTTGCAGGAGAG---------GCA------------------GGA------ATG---------------------------------ATG------------------------------------------------------------------TCTGCA------------------ATGACAGGT---TTCATCATAGGGATGATAGGTTGGTTATATATTCTTTACGAAATC---------------TTT------GCT---GGTGAAGCAAGTAAAGCTAACGCGGCT------AGC---GGAAGTGCAGCATGT---CAA---ACT---GCT---TTC---GGT---GCAATG---CGTTTAATTGTTACAGTA---------------------------------------------------------------GGCTGG---------GCAATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LLTVPLQMIEFYLILAA---V-TAVSA-GI------------FWR-LLIGTLVMLVGGFAGE---A------G--M-----------M----------------------SA------MTG-FIIGMIGWLYILYEI-----F--A-GEASKANAA--S-GSAAC-Q-T-A-F-G-AM-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [I-env6-a]_EU079203 [I-env6-a] NASB_64_env_samples_EU079203 gi|156106566|gb|EU079203| Uncultured organism clone NASB 64 putative proteorhodopsin gene, partial cds Uncultured organism clone NASB 64 putative proteorhodopsin gene, partial cds EU079203 [[proteorhodopsin super-cluster I/env cluster 6/A subcluster]] proteorhodopsin super-cluster I env cluster 6 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:155900 genomic_DNA other 27-FEB-2008 #na Sargasso_Sea_surface_water Sargasso Sea marine 32.6 -65.6 Abundant proteorhodopsin genes in the North Atlantic Ocean Campbell,B.J., Waidner,L.A., Cottrell,M.T. and Kirchman,D.L. Environ. Microbiol. 10 (1), 99109 (2008) 18211270 #na CGTTACGTAGATTGGTTACTAACTGTGCCTCTACAAATGATTGAGTTCTACTTGATTTTAGCAGCGGTTACAGCTGTTTCTGCAGGAATATTCTGGAGACTATTAATAGGTACATTAGTAATGCTTGTTGGTGGTTTTGCAGGAGAGGCAGGAATGATGTCTGCAATGACAGGTTTCATCATAGGGATGATAGGTTGGTTATACATTCTTTACGAAATCTTTGCTGGTGAAGCGAGTAAAGCTAACGCGGCTAGCGGAAGTGCAGCATGTCAAACTGCTTTCGGTGCAATGCGTTTAATTGTTACAGTAGGATGGGCTATCTAC RYVDWLLTVPLQMIEFYLILAAVTAVSAGIFWRLLIGTLVMLVGGFAGEAGMMSAMTGFIIGMIGWLYILYEIFAGEASKANAASGSAACQTAFGAMRLIVTVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTACGTAGATTGG------------------------TTACTAACTGTGCCTCTACAAATGATTGAGTTCTACTTGATTTTAGCAGCG---------GTT---ACAGCTGTTTCTGCA---GGAATA------------------------------------TTCTGGAGA---CTATTAATAGGTACATTAGTAATGCTTGTTGGTGGTTTTGCAGGAGAG---------GCA------------------GGA------ATG---------------------------------ATG------------------------------------------------------------------TCTGCA------------------ATGACAGGT---TTCATCATAGGGATGATAGGTTGGTTATACATTCTTTACGAAATC---------------TTT------GCT---GGTGAAGCGAGTAAAGCTAACGCGGCT------AGC---GGAAGTGCAGCATGT---CAA---ACT---GCT---TTC---GGT---GCAATG---CGTTTAATTGTTACAGTA---------------------------------------------------------------GGATGG---------GCTATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLQMIEFYLILAA---V-TAVSA-GI------------FWR-LLIGTLVMLVGGFAGE---A------G--M-----------M----------------------SA------MTG-FIIGMIGWLYILYEI-----F--A-GEASKANAA--S-GSAAC-Q-T-A-F-G-AM-RLIVTV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [I-env6-a]_DQ203601 [I-env6-a] medHO120B9_env_samples_DQ203601 gi|77547650|gb|DQ203601| Uncultured bacterium clone medHO120B9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120B9 predicted proteorhodopsin gene, partial cds DQ203601 [[proteorhodopsin super-cluster I/env cluster 6/A subcluster]] proteorhodopsin super-cluster I env cluster 6 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGACTGGTTACTAACTGTGCCTCTACAAATGATTGAATTCTACTTGATTTTAGCAGCGGTTACAGCTGTTTCTGCAGGAATATTCTGGAGACTATTAATAGGTACATTAGTAATGCTTGTTGGTGGTTTTGCAGGAGAGGCAGGAATGATGTCTGCAATGACAGGTTTCATCATAGGGATGATAGGTTGGTTATATATTCTTTACGAAATCTTTGCTGGTGAAGCAAGTAAAGCTAACGCGGCTAGCGGAAGTGCAGCATGTCAAACTGCTTTCGGTGCAATGCGTTTAATTGTTACAGTAGGGTGGGCTATTTATCCA RYIDWLLTVPLQMIEFYLILAAVTAVSAGIFWRLLIGTLVMLVGGFAGEAGMMSAMTGFIIGMIGWLYILYEIFAGEASKANAASGSAACQTAFGAMRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------TTACTAACTGTGCCTCTACAAATGATTGAATTCTACTTGATTTTAGCAGCG---------GTT---ACAGCTGTTTCTGCA---GGAATA------------------------------------TTCTGGAGA---CTATTAATAGGTACATTAGTAATGCTTGTTGGTGGTTTTGCAGGAGAG---------GCA------------------GGA------ATG---------------------------------ATG------------------------------------------------------------------TCTGCA------------------ATGACAGGT---TTCATCATAGGGATGATAGGTTGGTTATATATTCTTTACGAAATC---------------TTT------GCT---GGTGAAGCAAGTAAAGCTAACGCGGCT------AGC---GGAAGTGCAGCATGT---CAA---ACT---GCT---TTC---GGT---GCAATG---CGTTTAATTGTTACAGTA---------------------------------------------------------------GGGTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQMIEFYLILAA---V-TAVSA-GI------------FWR-LLIGTLVMLVGGFAGE---A------G--M-----------M----------------------SA------MTG-FIIGMIGWLYILYEI-----F--A-GEASKANAA--S-GSAAC-Q-T-A-F-G-AM-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-env6-a]_DQ422562 [I-env6-a] clone_med-tb04-0m-b7_DQ422562 gi|90024644|gb|DQ422562| Uncultured bacterium clone med-tb04-0m-b7 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-0m-b7 putative proteorhodopsin gene, partial cds. DQ422562 [[proteorhodopsin super-cluster I/env cluster 6/A subcluster]] proteorhodopsin super-cluster I env cluster 6 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 0m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTACTAACTGTACCTTTACAAATGATTGAATTTTACTTGGTCCTAGTAGCGGTTACAGCTGTTTCTGTAGGAATCTTCTGGAGACTTTTAATAGGTACCTTAGTAATGCTTATTGGTGGTTTCGCTGGAGAGGCAGGAATGATGTCTGCAATGACAGGTTTCATCATAGGGATGATCGGTTGGTTATACATTCTTTATGAAATCTTTGCTGGTGAAGCAAGTAAAGCTAACGCGGCTAGCGGCAGTGCAGCATGTCAAACTGCTTTTGGTGCAATGCGTTTAATTGTTACAGTAGGTTGGGCTATTTACCCA RYIDWLLTVPLQMIEFYLVLVAVTAVSVGIFWRLLIGTLVMLIGGFAGEAGMMSAMTGFIIGMIGWLYILYEIFAGEASKANAASGSAACQTAFGAMRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTACTAACTGTACCTTTACAAATGATTGAATTTTACTTGGTCCTAGTAGCG---------GTT---ACAGCTGTTTCTGTA---GGAATC------------------------------------TTCTGGAGA---CTTTTAATAGGTACCTTAGTAATGCTTATTGGTGGTTTCGCTGGAGAG---------GCA------------------GGA------ATG---------------------------------ATG------------------------------------------------------------------TCTGCA------------------ATGACAGGT---TTCATCATAGGGATGATCGGTTGGTTATACATTCTTTATGAAATC---------------TTT------GCT---GGTGAAGCAAGTAAAGCTAACGCGGCT------AGC---GGCAGTGCAGCATGT---CAA---ACT---GCT---TTT---GGT---GCAATG---CGTTTAATTGTTACAGTA---------------------------------------------------------------GGTTGG---------GCTATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLQMIEFYLVLVA---V-TAVSV-GI------------FWR-LLIGTLVMLIGGFAGE---A------G--M-----------M----------------------SA------MTG-FIIGMIGWLYILYEI-----F--A-GEASKANAA--S-GSAAC-Q-T-A-F-G-AM-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-env6-a]_DQ118962 [I-env6-a] clone_NA11r88_3_DQ118962 gi|71743403|gb|DQ118962| Uncultured bacterium clone NA11r88 3 proteorhodopsin gene, partial cds. Uncultured bacterium clone NA11r88 3 proteorhodopsin gene, partial cds. DQ118962 [[proteorhodopsin super-cluster I/env cluster 6/A subcluster]] proteorhodopsin super-cluster I env cluster 6 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-AUG-2005 June 14, 1998 0 m water at a station in the North Atlantic Atlantic Ocean marine 59.3 -21.8 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.-H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. Unpublished #na #na ATGGGTAAGTTATTATTGATGTTAGCATCTACAGTATTTTTCATTGTGGAACGCGATAGAGTAAGTGCAAAATGGAAAACATCATTAACTGTAGCCGGCTTAATTACTTTAATAGCTGCTGTACACTATTTCTATATGAGAGAAGTATGGGTGTCTACAGGTGATTCACCAACTGTATTTAGATATATAGATTGGTTACTAACTGTGCCTTTACAAATGATTGAGTTCTACTTAATCCTTGCTGCTGTAACAGCAGTTTCTGCTGGCGTTTTCTGGAGACTATTAATCGGTACTCTTGTAATGCTGATAGGTGGTTTTGCAGGTGAAGCTGGAATGATGTCTCATATGACAGGTTTCATTATCGGAATGATTGGTTGGTTATACATTCTTTATGAAATATTTGCAGGTGAAGCTTCTAAAGCAAATGCTTCAAGTGGAAGTGCAGCATGTCAAACAGCGTTTGGTGCTATGCGTTTAATTGTAACTGTTGGTTGGGCTATATATCCATTAGGATATTTCTTAGGATACTTAGCTGGCGGTACAGACCCAGCAACTGTTAATATAGTTTACAACTTAGCTGATTTTGTTAACAAAATCGCATTTGGTGTAGTTATATGGGCAGCAGCTGTTAAAGAATCTTCTAATGCTA MGKLLLMLASTVFFIVERDRVSAKWKTSLTVAGLITLIAAVHYFYMREVWVSTGDSPTVFRYIDWLLTVPLQMIEFYLILAAVTAVSAGVFWRLLIGTLVMLIGGFAGEAGMMSHMTGFIIGMIGWLYILYEIFAGEASKANASSGSAACQTAFGAMRLIVTVGWAIYPLGYFLGYLAGGTDPATVNIVYNLADFVNKIAFGVVIWAAAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAGTTATTATTGATGTTAGCATCTACAGTATTTTTCATTGTGGAACGCGATAGAGTAAGTGCA---AAATGGAAAACATCATTAACTGTAGCCGGCTTAATTACTTTAATAGCTGCTGTACACTATTTCTATATGAGAGAAGTATGGGTG------------------------------TCTACA---------------------GGTGATTCACCAACTGTATTTAGATATATAGATTGG------------------------TTACTAACTGTGCCTTTACAAATGATTGAGTTCTACTTAATCCTTGCTGCT---------GTA---ACAGCAGTTTCTGCT---GGCGTT------------------------------------TTCTGGAGA---CTATTAATCGGTACTCTTGTAATGCTGATAGGTGGTTTTGCAGGTGAA---------GCT------------------GGA------ATG---------------------------------ATG------------------------------------------------------------------TCTCAT------------------ATGACAGGT---TTCATTATCGGAATGATTGGTTGGTTATACATTCTTTATGAAATA---------------TTT------GCA---GGTGAAGCTTCTAAAGCAAATGCTTCA------AGT---GGAAGTGCAGCATGT---CAA---ACA---GCG---TTT---GGT---GCTATG---CGTTTAATTGTAACTGTT---------------------------------------------------------------GGTTGG---------GCTATATATCCATTAGGATATTTCTTAGGATACTTA---------------------------------------GCTGGCGGTACAGACCCAGCAACTGTTAATATAGTTTACAACTTAGCTGATTTTGTTAACAAAATCGCATTTGGTGTAGTTATATGGGCAGCAGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------MGKLLLMLASTVFFIVERDRVSA-KWKTSLTVAGLITLIAAVHYFYMREVWV----------ST-------GDSPTVFRYIDW--------LLTVPLQMIEFYLILAA---V-TAVSA-GV------------FWR-LLIGTLVMLIGGFAGE---A------G--M-----------M----------------------SH------MTG-FIIGMIGWLYILYEI-----F--A-GEASKANAS--S-GSAAC-Q-T-A-F-G-AM-RLIVTV---------------------GW---AIYPLGYFLGYL-------------AGGTDPATVNIVYNLADFVNKIAFGVVIWAAAVKE-SSNA------------------------------------- [I-env6-a]_DQ118961 [I-env6-a] clone_medN5_R8_5_DQ118961 gi|71743401|gb|DQ118961| Uncultured bacterium clone medN5 R8 5 proteorhodopsin gene, partial cds. Uncultured bacterium clone medN5 R8 5 proteorhodopsin gene, partial cds. DQ118961 [[proteorhodopsin super-cluster I/env cluster 6/A subcluster]] proteorhodopsin super-cluster I env cluster 6 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-AUG-2005 #na Catalano-Balear Sea (20 m depth) Mediterranean Sea marine 40.8 1.2 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.-H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. Unpublished #na #na ATGAAATTATTAATTGATATTAGTAAAAAACTTTTTGCATCACTTCTAGTAGTAATCGCTTTACCAACATTAACATTAGCAGGTGGGCACGGCGGTGCTCTTGATACTGGTGATTCGGTTGGGATTACTTTCTGGATAATTTCTATAGCAATGGTTGCATCTACAGTATTTTTTATTGTGGAGCGCGATAGAGTTAGTGCAAAATGGAAAACATCATTAACTGTAGCTGGCTTAATTACTTTAATAGCTGCTGTACACTATTTCTATATGAGAGAAGTATGGGTGTCTACAGGTGATTCACCAACTGTATTTGGATATATAGATTGGTTACTTACTGTACCTTTACAAATGATCGAGTTCTACTTAATCCTGGCTGCTGTAACAGCAGTTTCTGCTGGCGTTTTCTGGAGACTATTAATTGGTACTCTTGTAATGCTTATAGGTGGTTTTGCGGGTGAAGCTGGAATGATGTCTCATATGACAGGTTTCATTATTGGAATGATTGGTTGGTTATACATTCTTTATGAAATCTTTGCTGGTGAAGCTTCTAAAGCAAATGCTTCTAGTGGAAGTGCAGCATGTCAAACAGCGTTTGGTGCAATGCGTTTAATTGTAACTGTTGGTTGGGCTATCTATCCACTAGGATATTTCTTAGGATACTTAGCTGGCGGTACAGACCCAGCAACTGTTAATATAGTTTATAACTTAGCTGATTTTGTTAACAAAATCGCGTTTGGTGTAGTCATATGGGCAGCTGCTGTTAAAGAATCTTCTAATGC MKLLIDISKKLFASLLVVIALPTLTLAGGHGGALDTGDSVGITFWIISIAMVASTVFFIVERDRVSAKWKTSLTVAGLITLIAAVHYFYMREVWVSTGDSPTVFGYIDWLLTVPLQMIEFYLILAAVTAVSAGVFWRLLIGTLVMLIGGFAGEAGMMSHMTGFIIGMIGWLYILYEIFAGEASKANASSGSAACQTAFGAMRLIVTVGWAIYPLGYFLGYLAGGTDPATVNIVYNLADFVNKIAFGVVIWAAAVKESSN ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAATTATTAATTGATATTAGTAAAAAACTTTTTGCATCACTTCTAGTAGTAATCGCTTTACCAACATTAACATTAGCAGGTGGGCACGGCGGT---GCTCTTGATACTGGTGATTCGGTTGGGATTACTTTCTGGATAATTTCTATAGCAATGGTTGCATCTACAGTATTTTTTATTGTGGAGCGCGATAGAGTTAGTGCA---AAATGGAAAACATCATTAACTGTAGCTGGCTTAATTACTTTAATAGCTGCTGTACACTATTTCTATATGAGAGAAGTATGGGTG------------------------------TCTACA---------------------GGTGATTCACCAACTGTATTTGGATATATAGATTGG------------------------TTACTTACTGTACCTTTACAAATGATCGAGTTCTACTTAATCCTGGCTGCT---------GTA---ACAGCAGTTTCTGCT---GGCGTT------------------------------------TTCTGGAGA---CTATTAATTGGTACTCTTGTAATGCTTATAGGTGGTTTTGCGGGTGAA---------GCT------------------GGA------ATG---------------------------------ATG------------------------------------------------------------------TCTCAT------------------ATGACAGGT---TTCATTATTGGAATGATTGGTTGGTTATACATTCTTTATGAAATC---------------TTT------GCT---GGTGAAGCTTCTAAAGCAAATGCTTCT------AGT---GGAAGTGCAGCATGT---CAA---ACA---GCG---TTT---GGT---GCAATG---CGTTTAATTGTAACTGTT---------------------------------------------------------------GGTTGG---------GCTATCTATCCACTAGGATATTTCTTAGGATACTTA---------------------------------------GCTGGCGGTACAGACCCAGCAACTGTTAATATAGTTTATAACTTAGCTGATTTTGTTAACAAAATCGCGTTTGGTGTAGTCATATGGGCAGCTGCTGTTAAAGAA---TCTTCTAAT------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------MKLLIDISKKLFASLLVVIALPTLTLAGGHGG-ALDTGDSVGITFWIISIAMVASTVFFIVERDRVSA-KWKTSLTVAGLITLIAAVHYFYMREVWV----------ST-------GDSPTVFGYIDW--------LLTVPLQMIEFYLILAA---V-TAVSA-GV------------FWR-LLIGTLVMLIGGFAGE---A------G--M-----------M----------------------SH------MTG-FIIGMIGWLYILYEI-----F--A-GEASKANAS--S-GSAAC-Q-T-A-F-G-AM-RLIVTV---------------------GW---AIYPLGYFLGYL-------------AGGTDPATVNIVYNLADFVNKIAFGVVIWAAAVKE-SSN-------------------------------------- [I-env6-a]_AY250738 [I-env6-a] Uncultured_bacterium_clone_medA17_r8_15_partial_cds_AY250738 gi|29470273|gb|AY250738| Uncultured bacterium clone medA17 r8 15 proteorhodopsin gene, partial cds Uncultured bacterium clone medA17 r8 15 proteorhodopsin gene, partial cds AY250738 [[proteorhodopsin super-cluster I/env cluster 6/A subcluster]] proteorhodopsin super-cluster I env cluster 6 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 20-Apr-2004 #na collected_from_a_depth_of_50_m_at_a_station_in_the_Alboran_Sea_[30_N/4.25_W]_in_May_1998 Mediterranean Sea marine 36 -4.25 Novel Proteorhodopsin variants from the Mediterranean and Red Seas Sabehi,G., Massana,R., Bielawski,J.P., Rosenberg,M., Delong,E.F. and Beja,O. Environ. Microbiol. 5 (10), 842849 (2003) 14510837 PCR amplified from plankton DNA extracts AGCAAGAAACTTCTTGCGACATTTCTAGTAGTAACATCAATACCAGCAATAGCATTAGCTGGTGGGCATTCATCTGGTGGTTTAGCAGGAGATGACTGCGTAGGTGTTACTTTCTGGATTATTTCTATGGCTATGGTTGCTTCAACAGTATTCTTTATTGTTGAGCGTGACAGAGTTAGTGCGAAATGGAAAACATCATTAACAGTATCAGCGCTTATGACTTTAATCGCAGCTGTTCACTATTTCTACATGAGAGATGTTTGGGTAGCAACTGGCGAATCACCAACAGTCTTTAGATATATAGATTGGTTGTTAACAGTTCCACTTCTAATGATTGAGTTCTACTTTATCTTAGCAGCGGTTACAACTGTATCTTCAGGAATTTTCTGGAGATTACTAGTAGGTACTGTAATAATGCTAGTAGGTGGATACTTAGGTGAAGCTGGAATGATTTCGGTAATGACAGGTTTCATTATAGGGATGATAGGTTGGCTATACATTCTTTATGAAATCTTTGCAGGTGAAGCTAGCAAAGCAAATGCTTCTAGTGGAAGTGCAGCTTGTCAAACAGCCTTTGGAGCTTTACGTTTAATCGTAACCATTGGTTGGGCAATTTATCCGCTAGGATATTTCTTAGGTTATCTAGGCGGTGGGGCAGACCCAGCTACATTAAACATTGTTTACAACTTAGCTGACTTTGTAAACAAAATTGCTTTTGGTTTAATTATATGGGCAGCAGCTGTTAAAGAATCTTCTAATGCT SKKLLATFLVVTSIPAIALAGGHSSGGLAGDDCVGVTFWIISMAMVASTVFFIVERDRVSAKWKTSLTVSALMTLIAAVHYFYMRDVWVATGESPTVFRYIDWLLTVPLLMIEFYFILAAVTTVSSGIFWRLLVGTVIMLVGGYLGEAGMISVMTGFIIGMIGWLYILYEIFAGEASKANASSGSAACQTAFGALRLIVTIGWAIYPLGYFLGYLGGGADPATLNIVYNLADFVNKIAFGLIIWAAAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAAGAAACTTCTTGCGACATTTCTAGTAGTAACATCAATACCAGCAATAGCATTAGCTGGTGGGCATTCATCTGGTGGTTTAGCAGGAGATGACTGCGTAGGTGTTACTTTCTGGATTATTTCTATGGCTATGGTTGCTTCAACAGTATTCTTTATTGTTGAGCGTGACAGAGTTAGTGCG---AAATGGAAAACATCATTAACAGTATCAGCGCTTATGACTTTAATCGCAGCTGTTCACTATTTCTACATGAGAGATGTTTGGGTA------------------------------GCAACT---------------------GGCGAATCACCAACAGTCTTTAGATATATAGATTGG------------------------TTGTTAACAGTTCCACTTCTAATGATTGAGTTCTACTTTATCTTAGCAGCG---------GTT---ACAACTGTATCTTCA---GGAATT------------------------------------TTCTGGAGA---TTACTAGTAGGTACTGTAATAATGCTAGTAGGTGGATACTTAGGTGAA---------GCT------------------GGA------ATG---------------------------------ATT------------------------------------------------------------------TCGGTA------------------ATGACAGGT---TTCATTATAGGGATGATAGGTTGGCTATACATTCTTTATGAAATC---------------TTT------GCA---GGTGAAGCTAGCAAAGCAAATGCTTCT------AGT---GGAAGTGCAGCTTGT---CAA---ACA---GCC---TTT---GGA---GCTTTA---CGTTTAATCGTAACCATT---------------------------------------------------------------GGTTGG---------GCAATTTATCCGCTAGGATATTTCTTAGGTTATCTA---------------------------------------GGCGGTGGGGCAGACCCAGCTACATTAAACATTGTTTACAACTTAGCTGACTTTGTAAACAAAATTGCTTTTGGTTTAATTATATGGGCAGCAGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------SKKLLATFLVVTSIPAIALAGGHSSGGLAGDDCVGVTFWIISMAMVASTVFFIVERDRVSA-KWKTSLTVSALMTLIAAVHYFYMRDVWV----------AT-------GESPTVFRYIDW--------LLTVPLLMIEFYFILAA---V-TTVSS-GI------------FWR-LLVGTVIMLVGGYLGE---A------G--M-----------I----------------------SV------MTG-FIIGMIGWLYILYEI-----F--A-GEASKANAS--S-GSAAC-Q-T-A-F-G-AL-RLIVTI---------------------GW---AIYPLGYFLGYL-------------GGGADPATLNIVYNLADFVNKIAFGLIIWAAAVKE-SSNA------------------------------------- [I-env6-a]_AY250739 [I-env6-a] clone_medA17_r8_11_partial_AY250739 gi|29470275|gb|AY250739| Uncultured bacterium clone medA17 r8 11 proteorhodopsin gene, partial cds Uncultured bacterium clone medA17 r8 11 proteorhodopsin gene, partial cds AY250739 [[proteorhodopsin super-cluster I/env cluster 6/A subcluster]] proteorhodopsin super-cluster I env cluster 6 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 20-Apr-2004 #na collected_from_a_depth_of_50_m_at_a_station_in_the_Alboran_Sea_[30_N/4.25_W]_in_May_1998 Mediterranean Sea marine 36 -4.25 Novel Proteorhodopsin variants from the Mediterranean and Red Seas Sabehi,G., Massana,R., Bielawski,J.P., Rosenberg,M., Delong,E.F. and Beja,O. Environ. Microbiol. 5 (10), 842849 (2003) 14510837 PCR amplified from plankton DNA extracts AGCAAGAAACTTCTTGCGACATTTCTAGTAGTAACATCAATACCAGCAATAGCATTAGCTGGTGGGCATTCATCTGGTGGTTTAGCAGGAGATGACTACGTAGGTGTTACTTTCTGGATTATTTCTATGGCTATGGTTGCTTCAACAGTATTCTTTATTGTTGAGCGTGACAGAGTTAGTGCGAAATGGAAAACATCATTAACAGTATCAGCGCTTGTGACTTTAATCGCAGCTGTTCACTATTTCTACATGAGAGATGTTTGGGTAGCAACTGGCGAATCACCAACAGTCTTTAGATATATAGATTGGTTGTTAACAGTTCCACTTCTAATGATTGAGTTCTACTTTATCTTAGCAGCGGTTACAACTGTATCTTCAGGAATTTTCTGGAGATTACTAGTAGGTACTGTAATAATGCTAGTAGGTGGATACTTAGGTGAAGCTGGAATGATTTCGGTAATGACAGGTTTCATTATAGGGATGATAGGTTGGCTATACATTCTTTATGAAATCTTTGCAGGTGAAGCTAGCAAAGCAAATGCTTCTAGTGGAAGTGCAGCTTGTCAAACAGCCTTTGGAGCTTTACGTTTAATCGTAACCATTGGTTGGGCAATTTATCCGCTAGGATATTTCTTAGGTTATCTAGGCGGTGGGGCAGACCCAGCTACATTAAACATTGTTTACAACTTAGCTGACTTTGTAAACAAAATTGCTTTTGGTTTAATTATATGGGCAGCAGCTGTTAAAGAATCTTCTAATGCT SKKLLATFLVVTSIPAIALAGGHSSGGLAGDDYVGVTFWIISMAMVASTVFFIVERDRVSAKWKTSLTVSALVTLIAAVHYFYMRDVWVATGESPTVFRYIDWLLTVPLLMIEFYFILAAVTTVSSGIFWRLLVGTVIMLVGGYLGEAGMISVMTGFIIGMIGWLYILYEIFAGEASKANASSGSAACQTAFGALRLIVTIGWAIYPLGYFLGYLGGGADPATLNIVYNLADFVNKIAFGLIIWAAAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAAGAAACTTCTTGCGACATTTCTAGTAGTAACATCAATACCAGCAATAGCATTAGCTGGTGGGCATTCATCTGGTGGTTTAGCAGGAGATGACTACGTAGGTGTTACTTTCTGGATTATTTCTATGGCTATGGTTGCTTCAACAGTATTCTTTATTGTTGAGCGTGACAGAGTTAGTGCG---AAATGGAAAACATCATTAACAGTATCAGCGCTTGTGACTTTAATCGCAGCTGTTCACTATTTCTACATGAGAGATGTTTGGGTA------------------------------GCAACT---------------------GGCGAATCACCAACAGTCTTTAGATATATAGATTGG------------------------TTGTTAACAGTTCCACTTCTAATGATTGAGTTCTACTTTATCTTAGCAGCG---------GTT---ACAACTGTATCTTCA---GGAATT------------------------------------TTCTGGAGA---TTACTAGTAGGTACTGTAATAATGCTAGTAGGTGGATACTTAGGTGAA---------GCT------------------GGA------ATG---------------------------------ATT------------------------------------------------------------------TCGGTA------------------ATGACAGGT---TTCATTATAGGGATGATAGGTTGGCTATACATTCTTTATGAAATC---------------TTT------GCA---GGTGAAGCTAGCAAAGCAAATGCTTCT------AGT---GGAAGTGCAGCTTGT---CAA---ACA---GCC---TTT---GGA---GCTTTA---CGTTTAATCGTAACCATT---------------------------------------------------------------GGTTGG---------GCAATTTATCCGCTAGGATATTTCTTAGGTTATCTA---------------------------------------GGCGGTGGGGCAGACCCAGCTACATTAAACATTGTTTACAACTTAGCTGACTTTGTAAACAAAATTGCTTTTGGTTTAATTATATGGGCAGCAGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------SKKLLATFLVVTSIPAIALAGGHSSGGLAGDDYVGVTFWIISMAMVASTVFFIVERDRVSA-KWKTSLTVSALVTLIAAVHYFYMRDVWV----------AT-------GESPTVFRYIDW--------LLTVPLLMIEFYFILAA---V-TTVSS-GI------------FWR-LLVGTVIMLVGGYLGE---A------G--M-----------I----------------------SV------MTG-FIIGMIGWLYILYEI-----F--A-GEASKANAS--S-GSAAC-Q-T-A-F-G-AL-RLIVTI---------------------GW---AIYPLGYFLGYL-------------GGGADPATLNIVYNLADFVNKIAFGLIIWAAAVKE-SSNA------------------------------------- [I-env6-a]_AY728898 [I-env6-a] clone_MEDa17r8_23_AY728898 gi|51980731|gb|AY728898| Uncultured bacterium clone MEDa17r8 23 proteorhodopsin gene, partial cds. Uncultured bacterium clone MEDa17r8 23 proteorhodopsin gene, partial cds. AY728898 [[proteorhodopsin super-cluster I/env cluster 6/A subcluster]] proteorhodopsin super-cluster I env cluster 6 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 13-oct-04 #na collected from a depth of 50 m at a station in the Alboran Sea (30 N, 4.25 W) in May 1998 Mediterranean Sea marine 36 -4.25 Darwinian adaptation of proteorhodopsin to different light intensities in the marine environment Bielawski,J.P., Dunn,K.A., Sabehi,G. and Beja,O. Proc. Natl. Acad. Sci. U.S.A. 101 (41), 14824-14829 (2004) 15466697 PCR amplified from plankton DNA extracts ATGGGTAAATTATTACTGATACTTAGCAAGAAACTTCTTGCGACATTTCTAGTAGTAACATCAATACCAGCAATAGCATTAGCTGGTGGGCATTCATCTGGTGGTTTAGCAGGAGATGACTACGTAGGTGTTACTTTCTGGATTATTTCTATGGCTATGGTTGCTTCAACAGTATTCTTTATTGTTGAGCGTGACAGAGTTAGTGCGAAATGGAAAACATCATTAACAGTATCAGCGCTTGTGACTTTAATCGCAGCTGTTCACTATTTCTACATGAGAGATGTTTGGGTAGCAACTGGCGAATCACCAACAGTCTTTAGATATATAGATTGGTTGTTAACAGTTCCACTTCTAATGATTGAGTTCTACTTTATCTTAGCAGCGGTTACAACTGTATCTTCAGGAATTTTCTGGAGATTACTAGTAGGTACTGTAATAATGCTAGTAGGTGGATACTTAGGTGAAGCTGGAATGATTTCGGTAATGACAGGTTTCATTATAGGGATGATAGGTTGGCTATACATTCTTTATGAAATCTTTGCAGGTGAAGCTAGCAAAGCAAATGCTTCTAGTGGAAGTGCAGCTTGTCAAACAGCCTTTGGAGCTTTACGTTTAATCGTAACCATTGGTTGGGCAATTTATCCGCTAGGATATTTCTTGGGTTATCTAGGCGGTGGGGCAGACCCAGCTACATTAAACATTGTTTACAACTTAGCTGACTTTGTAAACAAAATTGCTTTTGGTTTAATTATATGGGCAGCAGCTGTTAAAGAATCTTCTAATGCTA MGKLLLILSKKLLATFLVVTSIPAIALAGGHSSGGLAGDDYVGVTFWIISMAMVASTVFFIVERDRVSAKWKTSLTVSALVTLIAAVHYFYMRDVWVATGESPTVFRYIDWLLTVPLLMIEFYFILAAVTTVSSGIFWRLLVGTVIMLVGGYLGEAGMISVMTGFIIGMIGWLYILYEIFAGEASKANASSGSAACQTAFGALRLIVTIGWAIYPLGYFLGYLGGGADPATLNIVYNLADFVNKIAFGLIIWAAAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGTAAATTATTACTGATACTTAGCAAGAAACTTCTTGCGACATTTCTAGTAGTAACATCAATACCAGCAATAGCATTAGCTGGTGGGCATTCATCTGGTGGTTTAGCAGGAGATGACTACGTAGGTGTTACTTTCTGGATTATTTCTATGGCTATGGTTGCTTCAACAGTATTCTTTATTGTTGAGCGTGACAGAGTTAGTGCG---AAATGGAAAACATCATTAACAGTATCAGCGCTTGTGACTTTAATCGCAGCTGTTCACTATTTCTACATGAGAGATGTTTGGGTA------------------------------GCAACT---------------------GGCGAATCACCAACAGTCTTTAGATATATAGATTGG------------------------TTGTTAACAGTTCCACTTCTAATGATTGAGTTCTACTTTATCTTAGCAGCG---------GTT---ACAACTGTATCTTCA---GGAATT------------------------------------TTCTGGAGA---TTACTAGTAGGTACTGTAATAATGCTAGTAGGTGGATACTTAGGTGAA---------GCT------------------GGA------ATG---------------------------------ATT------------------------------------------------------------------TCGGTA------------------ATGACAGGT---TTCATTATAGGGATGATAGGTTGGCTATACATTCTTTATGAAATC---------------TTT------GCA---GGTGAAGCTAGCAAAGCAAATGCTTCT------AGT---GGAAGTGCAGCTTGT---CAA---ACA---GCC---TTT---GGA---GCTTTA---CGTTTAATCGTAACCATT---------------------------------------------------------------GGTTGG---------GCAATTTATCCGCTAGGATATTTCTTGGGTTATCTA---------------------------------------GGCGGTGGGGCAGACCCAGCTACATTAAACATTGTTTACAACTTAGCTGACTTTGTAAACAAAATTGCTTTTGGTTTAATTATATGGGCAGCAGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------MGKLLLILSKKLLATFLVVTSIPAIALAGGHSSGGLAGDDYVGVTFWIISMAMVASTVFFIVERDRVSA-KWKTSLTVSALVTLIAAVHYFYMRDVWV----------AT-------GESPTVFRYIDW--------LLTVPLLMIEFYFILAA---V-TTVSS-GI------------FWR-LLVGTVIMLVGGYLGE---A------G--M-----------I----------------------SV------MTG-FIIGMIGWLYILYEI-----F--A-GEASKANAS--S-GSAAC-Q-T-A-F-G-AL-RLIVTI---------------------GW---AIYPLGYFLGYL-------------GGGADPATLNIVYNLADFVNKIAFGLIIWAAAVKE-SSNA------------------------------------- [I-env6-a]_FJ560865 [I-env6-a] HEL155_env_samples_FJ560865 gi|223868877|gb|FJ560865| Uncultured microorganism clone HEL155 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL155 putative proteorhodopsin gene, partial cds FJ560865 [[proteorhodopsin super-cluster I/env cluster 6/A subcluster]] proteorhodopsin super-cluster I env cluster 6 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTTCCATTGTTAATGATTGAGTTCTACTTTATTTTAGCGGCTGTTACTACAGTATCTGTAGGAATTTTCTGGAGATTACTAATCGGTACAGTAGTTATGCTAGTTGGTGGATACATGGGTGAAGCAGGAATGGTGTCAGTAATGACAGGATTCATTATAGGGATGATCGGTTGGCTATATATTCTTTATGAAATCTTTGCTGGTGAAGCTTCTAAAGCAAATGCTTCTAGTGGAAGTGCAGCATGTCAAACAAGCGATTTG TVPLLMIEFYFILAAVTTVSVGIFWRLLIGTVVMLVGGYMGEAGMVSVMTGFIIGMIGWLYILYEIFAGEASKANASSGSAACQTSDL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTTCCATTGTTAATGATTGAGTTCTACTTTATTTTAGCGGCT---------GTT---ACTACAGTATCTGTA---GGAATT------------------------------------TTCTGGAGA---TTACTAATCGGTACAGTAGTTATGCTAGTTGGTGGATACATGGGTGAA---------GCA------------------GGA------ATG---------------------------------GTG------------------------------------------------------------------TCAGTA------------------ATGACAGGA---TTCATTATAGGGATGATCGGTTGGCTATATATTCTTTATGAAATC---------------TTT------GCT---GGTGAAGCTTCTAAAGCAAATGCTTCT------AGT---GGAAGTGCAGCATGT---CAA---ACA---AGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMIEFYFILAA---V-TTVSV-GI------------FWR-LLIGTVVMLVGGYMGE---A------G--M-----------V----------------------SV------MTG-FIIGMIGWLYILYEI-----F--A-GEASKANAS--S-GSAAC-Q-T-S---------------------------------------------------------------------------------DL----------------------------------------------------------- [I-env6-a]_AY250741 [I-env6-a] Uncultured_bacterium_clone_medA15r8ex4_partial_cds_AY250741 gi|29470279|gb|AY250741| Uncultured bacterium clone medA15r8ex4 proteorhodopsin gene, partial cds Uncultured bacterium clone medA15r8ex4 proteorhodopsin gene, partial cds AY250741 [[proteorhodopsin super-cluster I/env cluster 6/A subcluster]] proteorhodopsin super-cluster I env cluster 6 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 20-Apr-2004 #na collected_from_a_depth_of_5_m_at_a_station_in_the_Alboran_Sea_[30_N/4.25_W]_in_May_1998 Mediterranean Sea marine 36 -4.25 Novel Proteorhodopsin variants from the Mediterranean and Red Seas Sabehi,G., Massana,R., Bielawski,J.P., Rosenberg,M., Delong,E.F. and Beja,O. Environ. Microbiol. 5 (10), 842849 (2003) 14510837 PCR amplified from plankton DNA extracts AGCAAAAAGTTTTTTTCGACGCTTCTATTAGTAACATCCTTGCCAACTTTAGCTTTAGCAGGTGGGCATTCATCTGGTCTTGCTGGAGATGACTATGTAGGTGTTACTTTCTGGATTATTTCCATGGCTATGGTTGCGTCAACAGTATTTTTCATTGTGGAGCGTGACAGAGTTAGCTCAAAATGGAAAACATCATTAACAGTATCAGCTTTGGTTACATTAATTGCTGCAGTGCATTATTTTTATATGAGAGATGTATGGGTAGCAACTGGTGAATCACCAACAGTATTTAGATATATAGATTGGTTATTAACAGTGCCACTATTAATGATTGAGTTCTACTTTATTTTAGCAGCGGTAACTACAGTTTCTTCAGGAATATTCTGGAGACTATTAATTGGTACAGTTGTAATGCTAGTAGGTGGGTATATGGGTGAAGCTGGAATGATCTCAGTGATGACAGGTTTCATTATCGGGATGATCGGTTGGCTATATATTCTTTACGAAATCTTTGCTGGTGAAGCTAGTAAAGCAAACGCTTCTAGTGGAAGCGCAGCATGCCAAACAGCATTTGGTGCGTTACGTTTAATCGTTACAGTTGGTTGGGCGATCTATCCAATAGGATACTTCGTAGGCTATCTAACTGGTGGTGGTGCAGACGCAGCTACACTAAACATAGTTTACAACTTAGCTGATTTTGTAAACAAAATTGCCTTTGGTTTAATCATATGGGCAGCAGCTGTTAAAGAATCTTCTAATGCT SKKFFSTLLLVTSLPTLALAGGHSSGLAGDDYVGVTFWIISMAMVASTVFFIVERDRVSSKWKTSLTVSALVTLIAAVHYFYMRDVWVATGESPTVFRYIDWLLTVPLLMIEFYFILAAVTTVSSGIFWRLLIGTVVMLVGGYMGEAGMISVMTGFIIGMIGWLYILYEIFAGEASKANASSGSAACQTAFGALRLIVTVGWAIYPIGYFVGYLTGGGADAATLNIVYNLADFVNKIAFGLIIWAAAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAAAAAGTTTTTTTCGACGCTTCTATTAGTAACATCCTTGCCAACTTTAGCTTTAGCAGGTGGGCATTCATCT---GGTCTTGCTGGAGATGACTATGTAGGTGTTACTTTCTGGATTATTTCCATGGCTATGGTTGCGTCAACAGTATTTTTCATTGTGGAGCGTGACAGAGTTAGCTCA---AAATGGAAAACATCATTAACAGTATCAGCTTTGGTTACATTAATTGCTGCAGTGCATTATTTTTATATGAGAGATGTATGGGTA------------------------------GCAACT---------------------GGTGAATCACCAACAGTATTTAGATATATAGATTGG------------------------TTATTAACAGTGCCACTATTAATGATTGAGTTCTACTTTATTTTAGCAGCG---------GTA---ACTACAGTTTCTTCA---GGAATA------------------------------------TTCTGGAGA---CTATTAATTGGTACAGTTGTAATGCTAGTAGGTGGGTATATGGGTGAA---------GCT------------------GGA------ATG---------------------------------ATC------------------------------------------------------------------TCAGTG------------------ATGACAGGT---TTCATTATCGGGATGATCGGTTGGCTATATATTCTTTACGAAATC---------------TTT------GCT---GGTGAAGCTAGTAAAGCAAACGCTTCT------AGT---GGAAGCGCAGCATGC---CAA---ACA---GCA---TTT---GGT---GCGTTA---CGTTTAATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCGATCTATCCAATAGGATACTTCGTAGGCTATCTAACT------------------------------------GGTGGTGGTGCAGACGCAGCTACACTAAACATAGTTTACAACTTAGCTGATTTTGTAAACAAAATTGCCTTTGGTTTAATCATATGGGCAGCAGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------SKKFFSTLLLVTSLPTLALAGGHSS-GLAGDDYVGVTFWIISMAMVASTVFFIVERDRVSS-KWKTSLTVSALVTLIAAVHYFYMRDVWV----------AT-------GESPTVFRYIDW--------LLTVPLLMIEFYFILAA---V-TTVSS-GI------------FWR-LLIGTVVMLVGGYMGE---A------G--M-----------I----------------------SV------MTG-FIIGMIGWLYILYEI-----F--A-GEASKANAS--S-GSAAC-Q-T-A-F-G-AL-RLIVTV---------------------GW---AIYPIGYFVGYLT------------GGGADAATLNIVYNLADFVNKIAFGLIIWAAAVKE-SSNA------------------------------------- [I-env6-a]_AY250740 [I-env6-a] clone_medA15r8b8_partial_AY250740 gi|29470277|gb|AY250740| Uncultured bacterium clone medA15r8b8 proteorhodopsin gene, partial cds Uncultured bacterium clone medA15r8b8 proteorhodopsin gene, partial cds AY250740 [[proteorhodopsin super-cluster I/env cluster 6/A subcluster]] proteorhodopsin super-cluster I env cluster 6 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 20-Apr-2004 #na collected_from_a_depth_of_5_m_at_a_station_in_the_Alboran_Sea_[30_N/4.25_W]_in_May_1998 Mediterranean Sea marine 36 -4.25 Novel Proteorhodopsin variants from the Mediterranean and Red Seas Sabehi,G., Massana,R., Bielawski,J.P., Rosenberg,M., Delong,E.F. and Beja,O. Environ. Microbiol. 5 (10), 842849 (2003) 14510837 PCR amplified from plankton DNA extracts AGCAAAAAGTTTTTTTCGACGCTTCTATTAGTAACATCCTTGCCAACTTTAGCTTTAGCAGGTGGGCATTCATCTGGTCTTGCTGGAGATGACTATGTAGGTGTTACTTTCTGGATTATTTCCATGGCTATGGTTGCGTCAACAGTATTTTTCATTGTGGAGCGTGACAGAGTTAGCTCAAAATGGAAAACATCATTAACAGTATCAGCTTTGGTTACATTAATTGCTGCAGTGCATTATTTTTATATGAGAGATGTATGGGTAGCAACTGGTGAATCACCAACAGTATTTAGATATATAGATTGGTTATTAACAGTGCCACTATTAATGATTGAGTTCTACTTTATTTTAGCAGCGGTAACTACAGTTTCTTCAGGAATATTCTGGAGACTATTAATTGGTACAGTTGTAATGCTAGTAGGTGGGTATATGGGTGAAGCTGGAATGATCTCAGTGATGACAGGTTTCATTATCGGGATGATCGGTTGGCTATATATTCTTTACGAAATCTTTGCTGGTGAAGCTAGTAAAGCAAACGCTTCTAGTGGAAGCGCAGCATGCCAAACAGCATTTGGTGCGTTACGTTTAATCGTTACAGTTGGTTGGGCGATCTATCCAATAGGATACTTCGTAGGCTATCTAACTGGTGGTGGTGCAGACGCAGCTACACTAAACATAGTTTACAACTTAGCTGATTTTGTAAACAAAATTGCCTTTGGTTTAATCATATGGGCAGCAGCTGTTAAAGAATCTTCTAATGCT SKKFFSTLLLVTSLPTLALAGGHSSGLAGDDYVGVTFWIISMAMVASTVFFIVERDRVSSKWKTSLTVSALVTLIAAVHYFYMRDVWVATGESPTVFRYIDWLLTVPLLMIEFYFILAAVTTVSSGIFWRLLIGTVVMLVGGYMGEAGMISVMTGFIIGMIGWLYILYEIFAGEASKANASSGSAACQTAFGALRLIVTVGWAIYPIGYFVGYLTGGGADAATLNIVYNLADFVNKIAFGLIIWAAAVKESSNA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAAAAAGTTTTTTTCGACGCTTCTATTAGTAACATCCTTGCCAACTTTAGCTTTAGCAGGTGGGCATTCATCT---GGTCTTGCTGGAGATGACTATGTAGGTGTTACTTTCTGGATTATTTCCATGGCTATGGTTGCGTCAACAGTATTTTTCATTGTGGAGCGTGACAGAGTTAGCTCA---AAATGGAAAACATCATTAACAGTATCAGCTTTGGTTACATTAATTGCTGCAGTGCATTATTTTTATATGAGAGATGTATGGGTA------------------------------GCAACT---------------------GGTGAATCACCAACAGTATTTAGATATATAGATTGG------------------------TTATTAACAGTGCCACTATTAATGATTGAGTTCTACTTTATTTTAGCAGCG---------GTA---ACTACAGTTTCTTCA---GGAATA------------------------------------TTCTGGAGA---CTATTAATTGGTACAGTTGTAATGCTAGTAGGTGGGTATATGGGTGAA---------GCT------------------GGA------ATG---------------------------------ATC------------------------------------------------------------------TCAGTG------------------ATGACAGGT---TTCATTATCGGGATGATCGGTTGGCTATATATTCTTTACGAAATC---------------TTT------GCT---GGTGAAGCTAGTAAAGCAAACGCTTCT------AGT---GGAAGCGCAGCATGC---CAA---ACA---GCA---TTT---GGT---GCGTTA---CGTTTAATCGTTACAGTT---------------------------------------------------------------GGTTGG---------GCGATCTATCCAATAGGATACTTCGTAGGCTATCTAACT------------------------------------GGTGGTGGTGCAGACGCAGCTACACTAAACATAGTTTACAACTTAGCTGATTTTGTAAACAAAATTGCCTTTGGTTTAATCATATGGGCAGCAGCTGTTAAAGAA---TCTTCTAATGCT--------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------SKKFFSTLLLVTSLPTLALAGGHSS-GLAGDDYVGVTFWIISMAMVASTVFFIVERDRVSS-KWKTSLTVSALVTLIAAVHYFYMRDVWV----------AT-------GESPTVFRYIDW--------LLTVPLLMIEFYFILAA---V-TTVSS-GI------------FWR-LLIGTVVMLVGGYMGE---A------G--M-----------I----------------------SV------MTG-FIIGMIGWLYILYEI-----F--A-GEASKANAS--S-GSAAC-Q-T-A-F-G-AL-RLIVTV---------------------GW---AIYPIGYFVGYLT------------GGGADAATLNIVYNLADFVNKIAFGLIIWAAAVKE-SSNA------------------------------------- [I-env5]_1112736868967 [I-env5] JCVI_ORF_1112736868967_GS123_Open_Ocean_3m jcvi|1112736868967| 1112736868967 JCVI ORF 1112736868967 1112736868967 [[proteorhodopsin super-cluster I/env cluster 5]] proteorhodopsin super-cluster I env cluster 5 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 01-oct-05 Open_Ocean/3m_depth/S_35.8_psu/GS123/International_water_between_Madagascar_and_South_Africa/Indian_Ocean Indian Ocean marine -32.399166 36.591946 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATTGTGGGCACTACAAAAGCTTTTGCAGCACCATTGATGCTTAGTACTAGTGATAACGTTGGTATATCATTTTGGCTAATTTCAATGGCTATGGTCGCTTCGACTGCATTCTTTTTTCTAGAAAGAGATAATGTAGCTGCAAAGTGGAAAACTTCTATGACAATCGCTGGGTTGGTTACTGGTGTAGCTGCTTGGCACTATTTCTATATGAGAGGTGTTTGGATTGCCACTGGTGATTCTCCAACTGTACTAAGATACATTGACTGGTTGATTACAGTGCCACTTCAAATTATTGAATTTTATGTAATTCTTGCTGCTGTTACTACGGTTGCAGCCGCTTTATTCTGGAGATTATTAGTTGCTTCATTAGTAATGTTAGTTTTCGGTTATTTAGGTGAAGCTGGAATTATGAACGCAATGCCTGCATTTATAATCGGAATGGCGGGCTGGTTGTACATCCTTTATGAGATCTTTGCTGGAGAAGCTAGCCAAGCGAATGCTGGTAGTGGAAACGCAGCAGGTCAACAAGCTTTTAGAGCACTATGTCTGATAGTGACTATTGGTTGGGCGATCTATCCATTAGGATATGCAATTGGTTATTTTGGAGGAGGAGTTGATGCTGCATCACTTAACCTTATCTATAACCTTGCTGACTTTGTTAACAAAATTGCTTTCGGTATGGCTATTTATGTAGCTGCAAAATCTGATAGC IVGTTKAFAAPLMLSTSDNVGISFWLISMAMVASTAFFFLERDNVAAKWKTSMTIAGLVTGVAAWHYFYMRGVWIATGDSPTVLRYIDWLITVPLQIIEFYVILAAVTTVAAALFWRLLVASLVMLVFGYLGEAGIMNAMPAFIIGMAGWLYILYEIFAGEASQANAGSGNAAGQQAFRALCLIVTIGWAIYPLGYAIGYFGGGVDAASLNLIYNLADFVNKIAFGMAIYVAAKSDS ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGTGGGCACTACAAAAGCTTTTGCAGCACCATTGATGCTTAGTACTAGTGATAACGTTGGTATATCATTTTGGCTAATTTCAATGGCTATGGTCGCTTCGACTGCATTCTTTTTTCTAGAAAGAGATAATGTAGCTGCA---AAGTGGAAAACTTCTATGACAATCGCTGGGTTGGTTACTGGTGTAGCTGCTTGGCACTATTTCTATATGAGAGGTGTTTGGATT------------------------------GCCACT---------------------GGTGATTCTCCAACTGTACTAAGATACATTGACTGG------------------------TTGATTACAGTGCCACTTCAAATTATTGAATTTTATGTAATTCTTGCTGCT---------GTT---ACTACGGTTGCAGCC---GCTTTA------------------------------------TTCTGGAGA---TTATTAGTTGCTTCATTAGTAATGTTAGTTTTCGGTTATTTAGGTGAA---------GCT------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------AACGCA------------------ATGCCTGCA---TTTATAATCGGAATGGCGGGCTGGTTGTACATCCTTTATGAGATC---------------TTT------GCT---GGAGAAGCTAGCCAAGCGAATGCTGGT------AGT---GGAAACGCAGCAGGT---CAA---CAA---GCT---TTT---AGA---GCACTA---TGTCTGATAGTGACTATT---------------------------------------------------------------GGTTGG---------GCGATCTATCCATTAGGATATGCAATTGGTTATTTTGGA---GGAGGA---------------------------GTTGATGCT---------GCATCACTTAACCTTATCTATAACCTTGCTGACTTTGTTAACAAAATTGCTTTCGGTATGGCTATTTATGTAGCTGCAAAATCTGAT---AGC------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------IVGTTKAFAAPLMLSTSDNVGISFWLISMAMVASTAFFFLERDNVAA-KWKTSMTIAGLVTGVAAWHYFYMRGVWI----------AT-------GDSPTVLRYIDW--------LITVPLQIIEFYVILAA---V-TTVAA-AL------------FWR-LLVASLVMLVFGYLGE---A------G--I-----------M----------------------NA------MPA-FIIGMAGWLYILYEI-----F--A-GEASQANAG--S-GNAAG-Q-Q-A-F-R-AL-CLIVTI---------------------GW---AIYPLGYAIGYFG-GG---------VDA---ASLNLIYNLADFVNKIAFGMAIYVAAKSD-S---------------------------------------- [I-env5]_DQ339176 [I-env5] clone_S-SOM-B5_DQ339176 gi|85681329|gb|DQ339176| Uncultured bacterium clone S-SOM-B5 predicted proteorhodopsin gene, partial cds. Uncultured bacterium clone S-SOM-B5 predicted proteorhodopsin gene, partial cds. DQ339176 [[proteorhodopsin super-cluster I/env cluster 5]] proteorhodopsin super-cluster I env cluster 5 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-juil-98 depth of 0m at station BATS114a from Sargasso Sea Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTGATTACAGTGCCACTTCAAATTATCGAATTTTATGTAATTCTTGCTGCTGTTACTACGGTTGCAGCTGCTTTATTCTGGAGACTATTAGTTGCTTCATTAGTAATGTTAGTTTTCGGTTATTTAGGCGAAGCTGGAATTATGAACGCAATGCCTGCATTTATAATCGGAATGGCGGGCTGGTTGTACATCCTTTATGAGATCTTTGCTGGAGAAGCTAGCCAAGCGAATGCTGGTAGTGGAAACGCAGCAGGTCAACAAGCTTTTAGAGCACTATGTCTGATAGTGACTATTGGGTGGGCCATATATCCA RYIDWLITVPLQIIEFYVILAAVTTVAAALFWRLLVASLVMLVFGYLGEAGIMNAMPAFIIGMAGWLYILYEIFAGEASQANAGSGNAAGQQAFRALCLIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTGATTACAGTGCCACTTCAAATTATCGAATTTTATGTAATTCTTGCTGCT---------GTT---ACTACGGTTGCAGCT---GCTTTA------------------------------------TTCTGGAGA---CTATTAGTTGCTTCATTAGTAATGTTAGTTTTCGGTTATTTAGGCGAA---------GCT------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------AACGCA------------------ATGCCTGCA---TTTATAATCGGAATGGCGGGCTGGTTGTACATCCTTTATGAGATC---------------TTT------GCT---GGAGAAGCTAGCCAAGCGAATGCTGGT------AGT---GGAAACGCAGCAGGT---CAA---CAA---GCT---TTT---AGA---GCACTA---TGTCTGATAGTGACTATT---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIIEFYVILAA---V-TTVAA-AL------------FWR-LLVASLVMLVFGYLGE---A------G--I-----------M----------------------NA------MPA-FIIGMAGWLYILYEI-----F--A-GEASQANAG--S-GNAAG-Q-Q-A-F-R-AL-CLIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-env5]_DQ422694 [I-env5] clone_med-tb04-20m-f11_DQ422694 gi|90024908|gb|DQ422694| Uncultured bacterium clone med-tb04-20m-f11 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-20m-f11 putative proteorhodopsin gene, partial cds. DQ422694 [[proteorhodopsin super-cluster I/env cluster 5]] proteorhodopsin super-cluster I env cluster 5 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 20m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATTACAGTGCCACTTCAAATTGTTGAATTTTATGTAATTCTTGCTGCTGTGACTGCTGTTGCTGCCGGCCTATTCTGGAGACTATTAGTTGCTTCTTTAGTAATGTTAGTTTTTGGTTATCTAGGTGAAGCAGGAGTAATGTCATATATGCCTGCATTTATAATTGGAATGGCAGGTTGGTTGTACATCCTTTATGAGATCTTTGCAGGTGAAGCTAGTAAAGCAAATGCTGGTAGTGGAAATGCTGCAGGTCAACAAGCTTTTAGAGCACTAGCTCTGATAGTGACTATTGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAVTAVAAGLFWRLLVASLVMLVFGYLGEAGVMSYMPAFIIGMAGWLYILYEIFAGEASKANAGSGNAAGQQAFRALALIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATTACAGTGCCACTTCAAATTGTTGAATTTTATGTAATTCTTGCTGCT---------GTG---ACTGCTGTTGCTGCC---GGCCTA------------------------------------TTCTGGAGA---CTATTAGTTGCTTCTTTAGTAATGTTAGTTTTTGGTTATCTAGGTGAA---------GCA------------------GGA------GTA---------------------------------ATG------------------------------------------------------------------TCATAT------------------ATGCCTGCA---TTTATAATTGGAATGGCAGGTTGGTTGTACATCCTTTATGAGATC---------------TTT------GCA---GGTGAAGCTAGTAAAGCAAATGCTGGT------AGT---GGAAATGCTGCAGGT---CAA---CAA---GCT---TTT---AGA---GCACTA---GCTCTGATAGTGACTATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---V-TAVAA-GL------------FWR-LLVASLVMLVFGYLGE---A------G--V-----------M----------------------SY------MPA-FIIGMAGWLYILYEI-----F--A-GEASKANAG--S-GNAAG-Q-Q-A-F-R-AL-ALIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-env5]_DQ422519 [I-env5] clone_med-tb04-50m-g10_DQ422519 gi|90024558|gb|DQ422519| Uncultured bacterium clone med-tb04-50m-g10 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-tb04-50m-g10 putative proteorhodopsin gene, partial cds. DQ422519 [[proteorhodopsin super-cluster I/env cluster 5]] proteorhodopsin super-cluster I env cluster 5 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 25-mars-06 Feb-2006 depth of 50m at station TB04 from the Mediterranean Sea Mediterranean Sea marine 32.1667 34.5667 Direct Submission Sabehi,G. and Beja,O. Unpublished #na #na AGATACATAGACTGGCTGATTACAGTGCCACTTCAAATTGTTGAATTTTATGTAATTCTTGCTGCTGTGACTGCTGTTGCTGCCGGCCTATTCTGGAGACTATTAGTTGCTTCTTTAGTAATGTTAGTTTTTGGTTATCTAGGTGAAGCAGGAGTAATGTCATATATGCCTGCATTTATAATTGGAATGGCAGGTTGGTTGTACATCCTTTATGAGATCTTTGCAGGTGAAGCTAGTAAAGCAAATGCTGGTAGTGGAAATGCTGCAGGTCAACAAGCTTTTAGAGCACTAGCTCTGATAGTGACTATTGGTTGGGCTATTTATCCA RYIDWLITVPLQIVEFYVILAAVTAVAAGLFWRLLVASLVMLVFGYLGEAGVMSYMPAFIIGMAGWLYILYEIFAGEASKANAGSGNAAGQQAFRALALIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATAGACTGG------------------------CTGATTACAGTGCCACTTCAAATTGTTGAATTTTATGTAATTCTTGCTGCT---------GTG---ACTGCTGTTGCTGCC---GGCCTA------------------------------------TTCTGGAGA---CTATTAGTTGCTTCTTTAGTAATGTTAGTTTTTGGTTATCTAGGTGAA---------GCA------------------GGA------GTA---------------------------------ATG------------------------------------------------------------------TCATAT------------------ATGCCTGCA---TTTATAATTGGAATGGCAGGTTGGTTGTACATCCTTTATGAGATC---------------TTT------GCA---GGTGAAGCTAGTAAAGCAAATGCTGGT------AGT---GGAAATGCTGCAGGT---CAA---CAA---GCT---TTT---AGA---GCACTA---GCTCTGATAGTGACTATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYVILAA---V-TAVAA-GL------------FWR-LLVASLVMLVFGYLGE---A------G--V-----------M----------------------SY------MPA-FIIGMAGWLYILYEI-----F--A-GEASKANAG--S-GNAAG-Q-Q-A-F-R-AL-ALIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-env5]_DQ422383 [I-env5] clone_med-50m-c4_DQ422383 gi|90024286|gb|DQ422383| Uncultured bacterium clone med-50m-c4 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone med-50m-c4 putative proteorhodopsin gene, partial cds. DQ422383 [[proteorhodopsin super-cluster I/env cluster 5]] proteorhodopsin super-cluster I env cluster 5 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 08-MAY-2007 01-janv-06 depth of 50m at station HO1 from the Mediterranean Sea Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 48-55 (2007) 18043613 #na AGATACATTGACTGGCTGATTACAGTGCCACTTCAAGTTGTTGAATTTTATGTAATTCTTGCTGCTGTGACTGCTGTTGCTGCCGGCCTATTCTGGAGACTATTAGTTGCTTCTTTAGTAATGTTAGTTTTTGGTTATCTAGGTGAAGCAGGAGTAATGTCATATATGCCTGCATTTATAATTGGAATGGCAGGTTGGTTGTACATCCTTTATGAGATCTTTGCAGGTGAAGCTAGTAAAGCAAATGCTGGTAGTGGAAATGCTGCAGGTCAACAAGCTTTTAGAGCACTAGCTCTGATAGTGACTATTGGTTGGGCTATTTATCCA RYIDWLITVPLQVVEFYVILAAVTAVAAGLFWRLLVASLVMLVFGYLGEAGVMSYMPAFIIGMAGWLYILYEIFAGEASKANAGSGNAAGQQAFRALALIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGACTGG------------------------CTGATTACAGTGCCACTTCAAGTTGTTGAATTTTATGTAATTCTTGCTGCT---------GTG---ACTGCTGTTGCTGCC---GGCCTA------------------------------------TTCTGGAGA---CTATTAGTTGCTTCTTTAGTAATGTTAGTTTTTGGTTATCTAGGTGAA---------GCA------------------GGA------GTA---------------------------------ATG------------------------------------------------------------------TCATAT------------------ATGCCTGCA---TTTATAATTGGAATGGCAGGTTGGTTGTACATCCTTTATGAGATC---------------TTT------GCA---GGTGAAGCTAGTAAAGCAAATGCTGGT------AGT---GGAAATGCTGCAGGT---CAA---CAA---GCT---TTT---AGA---GCACTA---GCTCTGATAGTGACTATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQVVEFYVILAA---V-TAVAA-GL------------FWR-LLVASLVMLVFGYLGE---A------G--V-----------M----------------------SY------MPA-FIIGMAGWLYILYEI-----F--A-GEASKANAG--S-GNAAG-Q-Q-A-F-R-AL-ALIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-Delta-SAR324]_NZ_AGAU01000412 [I-Delta-SAR324] SAR324_cluster_JCVI_SC_AAA005_ctg_1024_genome_NZ_AGAU01000412 gi|378760034|gb|NZ_AGAU01000412| SAR324 cluster bacterium JCVISC AAA005 ctg 1024, whole genome shotgun sequence SAR324 cluster bacterium JCVISC AAA005 ctg 1024, whole genome shotgun sequence NZ_AGAU01000412 [[proteorhodopsin super-cluster I/Deltaproteobacterial-like cluster/SAR324-like subcluster]] proteorhodopsin super-cluster I Deltaproteobacterial-like cluster SAR324-like subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/Proteobacteria/Deltaproteobacteria/SAR324 cluster] taxon:1073573 genomic_DNA strain 12-May-2013 #na #na Pacific Ocean marine 32.867099 -117.257649 Direct Submission Chitsaz,H., YeeGreenbaum,J.L., Tesler,G., Lombardo,M.J., Dupont,C.L., Badger,J.H., Novotny,M., Rusch,D.B., Fraser,L.J., Gormley,N.A., SchulzTrieglaff,O., Smith,G.P., Evers,D.J., Pevzner,P.A. and Lasken,R.S. Submitted (29AUG2011) J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA #na #na ATGGAAACTTTGTTAAAGCCAGACGATTTTGTAGGTATTTCTTTTTTCGTTGCAACAATGGCAATGATGGCCTCAGCTGTTTTCTTTTTTCTAGAAAGAGACAGTGTAGCTGGAAAATGGAAAACTTCAGTGACTGTAGCAGGTTTGATAACAGGCATAGCAGCAGTTCATTACTTTTATATGAGAGATGTATGGGTTACGACTGGACAGAGCCCAACAGTTTTTAGGTATGTAGACTGGTTACTGACGGTTCCACTACAAATTGTAGAATTTTATTTGATATTGGCGGCAATTGCAGCTGTGCCAATAATACTTTTTTGGAGGCTTCTAGTCTATTCTCTCATTATGCTGATCTTTGGTTATCTGGGTGAAGCTGGTTTTGTAGATGTAACTCTGGGATTTATTCTAGGAATGGTTGGATGGCTCCTAATTCTTTATGAAATCTTTTTTGGTGAAGCTAGTCAAATCAATGCAAATTCTGCAAATACATCTTGTCAAAAAGCTTTCCATGCACTACGCCTTATCGTGACTGTGGGATGGGCTATTTATCCCATTGGTTACTTTTGGGGATATATGCTTGATAGTGCAAATGTAGAAGCTGTAAATATAATTTATAATTATGCTGATCTAATAAATAAGATGGCTTTCGGCTTAGTAATCTGGGCTGCAGCTAAACAAGATTCAAAAGTTGAA METLLKPDDFVGISFFVATMAMMASAVFFFLERDSVAGKWKTSVTVAGLITGIAAVHYFYMRDVWVTTGQSPTVFRYVDWLLTVPLQIVEFYLILAAIAAVPIILFWRLLVYSLIMLIFGYLGEAGFVDVTLGFILGMVGWLLILYEIFFGEASQINANSANTSCQKAFHALRLIVTVGWAIYPIGYFWGYMLDSANVEAVNIIYNYADLINKMAFGLVIWAAAKQDSKVE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGAAACTTTGTTAAAGCCAGACGATTTTGTAGGTATTTCTTTTTTCGTTGCAACAATGGCAATGATGGCCTCAGCTGTTTTCTTTTTTCTAGAAAGAGACAGTGTAGCTGGA---AAATGGAAAACTTCAGTGACTGTAGCAGGTTTGATAACAGGCATAGCAGCAGTTCATTACTTTTATATGAGAGATGTATGGGTT------------------------------ACGACT---------------------GGACAGAGCCCAACAGTTTTTAGGTATGTAGACTGG------------------------TTACTGACGGTTCCACTACAAATTGTAGAATTTTATTTGATATTGGCGGCA---------ATT---GCAGCTGTGCCAATA---ATACTT------------------------------------TTTTGGAGG---CTTCTAGTCTATTCTCTCATTATGCTGATCTTTGGTTATCTGGGTGAA---------GCT------------------GGT------TTT---------------------------------GTA------------------------------------------------------------------GATGTA------------------ACTCTGGGA---TTTATTCTAGGAATGGTTGGATGGCTCCTAATTCTTTATGAAATC---------------TTT------TTT---GGTGAAGCTAGTCAAATCAATGCAAAT------TCT---GCAAATACATCTTGT---CAA---AAA---GCT---TTC---CAT---GCACTA---CGCCTTATCGTGACTGTG---------------------------------------------------------------GGATGG---------GCTATTTATCCCATTGGTTACTTTTGGGGATATATGCTT---GATAGT---------------------------GCAAATGTA---------GAAGCTGTAAATATAATTTATAATTATGCTGATCTAATAAATAAGATGGCTTTCGGCTTAGTAATCTGGGCTGCAGCTAAACAAGAT---TCAAAAGTTGAA--------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------METLLKPDDFVGISFFVATMAMMASAVFFFLERDSVAG-KWKTSVTVAGLITGIAAVHYFYMRDVWV----------TT-------GQSPTVFRYVDW--------LLTVPLQIVEFYLILAA---I-AAVPI-IL------------FWR-LLVYSLIMLIFGYLGE---A------G--F-----------V----------------------DV------TLG-FILGMVGWLLILYEI-----F--F-GEASQINAN--S-ANTSC-Q-K-A-F-H-AL-RLIVTV---------------------GW---AIYPIGYFWGYML-DS---------ANV---EAVNIIYNYADLINKMAFGLVIWAAAKQD-SKVE------------------------------------- [I-Delta-a]_JX863173 [I-Delta-a] MALINA_OTU13_164_Q_env_samples_JX863173 gi|425477296|gb|JX863173| Uncultured bacterium clone MALINA OTU13 164 Q putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU13 164 Q putative proteorhodopsin gene, partial cds JX863173 [[proteorhodopsin super-cluster I/Deltaproteobacterial-like cluster/A subcluster]] proteorhodopsin super-cluster I Deltaproteobacterial-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 11Aug2009 80m_depth Arctic Ocean marine 70.68 -139.62 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGGTACTGACTGTACCATTACAAATTGTAGAATTTTATCTAATTTTGGCGGCAATAGCTACAGTTCCCATAGCATTATTTTGGAGATTACTAGTTTATTCTTTAATAATGTTGGTCTTCGGATATCTAGGTGAAGCAAATTTTATAGATGCCACTTTAGGATTTGCAATTGGTATGATTGGATGGCTTTTGATTATTTATGAGATCTTTTTAGGAGAAGCTAGTAAAATTAATGCTGATTCAGCAAACCTTTCCTGTCAAAAGGCATTTAATGCGTTGAGGTTAATTGTAACCATA WVLTVPLQIVEFYLILAAIATVPIALFWRLLVYSLIMLVFGYLGEANFIDATLGFAIGMIGWLLIIYEIFLGEASKINADSANLSCQKAFNALRLIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------GTACTGACTGTACCATTACAAATTGTAGAATTTTATCTAATTTTGGCGGCA---------ATA---GCTACAGTTCCCATA---GCATTA------------------------------------TTTTGGAGA---TTACTAGTTTATTCTTTAATAATGTTGGTCTTCGGATATCTAGGTGAA---------GCA------------------AAT------TTT---------------------------------ATA------------------------------------------------------------------GATGCC------------------ACTTTAGGA---TTTGCAATTGGTATGATTGGATGGCTTTTGATTATTTATGAGATC---------------TTT------TTA---GGAGAAGCTAGTAAAATTAATGCTGAT------TCA---GCAAACCTTTCCTGT---CAA---AAG---GCA---TTT---AAT---GCGTTG---AGGTTAATTGTAACCATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------VLTVPLQIVEFYLILAA---I-ATVPI-AL------------FWR-LLVYSLIMLVFGYLGE---A------N--F-----------I----------------------DA------TLG-FAIGMIGWLLIIYEI-----F--L-GEASKINAD--S-ANLSC-Q-K-A-F-N-AL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Delta-a]_1105152588882 [I-Delta-a] JCVI_ORF_1105152588882_GS000c_Open_Ocean_5m jcvi|1105152588882| 1105152588882 JCVI ORF 1105152588882 1105152588882 [[proteorhodopsin super-cluster I/Deltaproteobacterial-like cluster/A subcluster]] proteorhodopsin super-cluster I Deltaproteobacterial-like cluster A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.22_0.8 other #na 25-FEB-2003 Open_Ocean/5m_depth/S_36.7_psu/GS000c/Sargasso_Stations_3/Sargasso_Sea Sargasso Sea marine 32.174835 -64.01017 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGGAAGCAATTTTAAACCCTGATGATTTCGTTGGGATTTCGTTTTTTGTAGCTACTATGGCTATGATGGCATCTGCAGTATTCTTTTTCTTTGAAAGAGACAGTGTATCAGTGAAGTGGAGAACTTCTGTTACCGTTGCAGGCTTAATTACCGGAATAGCAGCTGTACATTATTTTTACATGCGAGATGTATGGGTATCAACTGGAGAAAGCCCTACTGTATTTAGGTATGTTGACTGGTTATTGACGGTTCCTTTACAAATCGTTGAATTCTATCTAATTTTGGCAGCAATTGCATCTGTTCCAATAGCTTTATTTTGGAGATTACTTGTTTATTCATTGATTATGTTGGTATCAGGATATTTAGGTGAAGCAAATTTTATTGATGTCACTTTAGGTTTTGTTGTTGGTATGATTGCATGGCTTTTAATTATTTATGAGATTTTTAAGGGAGAAGCTAGCAAGATAAATGCTGGTTCAGCAAATGAAGCCTGTCAAAAGGCATTTAATGCTTTGAGATTAATTGTAACGATAGGTTGGGCTATATATCCTATAGGCTATTTCTGGGGTTATTTACTAGAAAGCGCCAATGTAAATGCTGTCAATATTATTTATAATTATGCAGATCTAATCAATAAAACAGCATTTGGTTTAGTGATTTGGGCTGCGGCAAAAAAGGATTCTAAAGCTGAA MEAILNPDDFVGISFFVATMAMMASAVFFFFERDSVSVKWRTSVTVAGLITGIAAVHYFYMRDVWVSTGESPTVFRYVDWLLTVPLQIVEFYLILAAIASVPIALFWRLLVYSLIMLVSGYLGEANFIDVTLGFVVGMIAWLLIIYEIFKGEASKINAGSANEACQKAFNALRLIVTIGWAIYPIGYFWGYLLESANVNAVNIIYNYADLINKTAFGLVIWAAAKKDSKAE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGAAGCAATTTTAAACCCTGATGATTTCGTTGGGATTTCGTTTTTTGTAGCTACTATGGCTATGATGGCATCTGCAGTATTCTTTTTCTTTGAAAGAGACAGTGTATCAGTG---AAGTGGAGAACTTCTGTTACCGTTGCAGGCTTAATTACCGGAATAGCAGCTGTACATTATTTTTACATGCGAGATGTATGGGTA------------------------------TCAACT---------------------GGAGAAAGCCCTACTGTATTTAGGTATGTTGACTGG------------------------TTATTGACGGTTCCTTTACAAATCGTTGAATTCTATCTAATTTTGGCAGCA---------ATT---GCATCTGTTCCAATA---GCTTTA------------------------------------TTTTGGAGA---TTACTTGTTTATTCATTGATTATGTTGGTATCAGGATATTTAGGTGAA---------GCA------------------AAT------TTT---------------------------------ATT------------------------------------------------------------------GATGTC------------------ACTTTAGGT---TTTGTTGTTGGTATGATTGCATGGCTTTTAATTATTTATGAGATT---------------TTT------AAG---GGAGAAGCTAGCAAGATAAATGCTGGT------TCA---GCAAATGAAGCCTGT---CAA---AAG---GCA---TTT---AAT---GCTTTG---AGATTAATTGTAACGATA---------------------------------------------------------------GGTTGG---------GCTATATATCCTATAGGCTATTTCTGGGGTTATTTACTA---GAAAGC---------------------------GCCAATGTA---------AATGCTGTCAATATTATTTATAATTATGCAGATCTAATCAATAAAACAGCATTTGGTTTAGTGATTTGGGCTGCGGCAAAAAAGGAT---TCTAAAGCTGAA--------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------MEAILNPDDFVGISFFVATMAMMASAVFFFFERDSVSV-KWRTSVTVAGLITGIAAVHYFYMRDVWV----------ST-------GESPTVFRYVDW--------LLTVPLQIVEFYLILAA---I-ASVPI-AL------------FWR-LLVYSLIMLVSGYLGE---A------N--F-----------I----------------------DV------TLG-FVVGMIAWLLIIYEI-----F--K-GEASKINAG--S-ANEAC-Q-K-A-F-N-AL-RLIVTI---------------------GW---AIYPIGYFWGYLL-ES---------ANV---NAVNIIYNYADLINKTAFGLVIWAAAKKD-SKAE------------------------------------- [I-Gamma1-b]_JX863115 [I-Gamma1-b] MALINA_OTU02_078_Q_env_samples_JX863115 gi|425477180|gb|JX863115| Uncultured bacterium clone MALINA OTU02 078 Q putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU02 078 Q putative proteorhodopsin gene, partial cds JX863115 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 1/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; P108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 08Aug2009 70m_depth Arctic Ocean marine 70.8 -133.73 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGGTACTTACTCATAGTATCCAACTGGTGCCGTTTTATTTGATTCTTAGTGCAACTACAAAAGTATCTTCGGCGCTTTTTTGGCGTCTACTCATTGGCTCTTTAGTCATGGTGGTTGGTGAATTCTTAGGTGCCGCTGGATATATGAGCAAGGCCTTAGGATTTATTATTGGAATTGTTGGTTGGCTGTATATTTTAGGTGAACTCTATATGGGTGAGGCTGGTAAAGCTAACGCGGTAAGCGACGATCAAGCTGTGCATTTTGCCTTTAATGGGCTGCGCCTTATTGTCACTATC WVLTHSIQLVPFYLILSATTKVSSALFWRLLIGSLVMVVGEFLGAAGYMSKALGFIIGIVGWLYILGELYMGEAGKANAVSDDQAVHFAFNGLRLIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------GTACTTACTCATAGTATCCAACTGGTGCCGTTTTATTTGATTCTTAGTGCA---------ACT---ACAAAAGTATCTTCG---GCGCTT------------------------------------TTTTGGCGT---CTACTCATTGGCTCTTTAGTCATGGTGGTTGGTGAATTCTTAGGTGCC---------GCT------------------GGA------TAT---------------------------------ATG------------------------------------------------------------------AGCAAG------------------GCCTTAGGA---TTTATTATTGGAATTGTTGGTTGGCTGTATATTTTAGGTGAACTC---------------TAT------ATG---GGTGAGGCTGGTAAAGCTAACGCGGTA------AGC---GACGATCAAGCTGTG---CAT---TTT---GCC---TTT---AAT---GGGCTG---CGCCTTATTGTCACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------VLTHSIQLVPFYLILSA---T-TKVSS-AL------------FWR-LLIGSLVMVVGEFLGA---A------G--Y-----------M----------------------SK------ALG-FIIGIVGWLYILGEL-----Y--M-GEAGKANAV--S-DDQAV-H-F-A-F-N-GL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma1-b]_JX863118 [I-Gamma1-b] MALINA_OTU02_238_Q_env_samples_JX863118 gi|425477186|gb|JX863118| Uncultured bacterium clone MALINA OTU02 238 Q putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU02 238 Q putative proteorhodopsin gene, partial cds JX863118 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 1/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; L108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 11Aug2009 3m_depth Arctic Ocean marine 70.68 -139.62 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGGTACTTACTCATAGTATCCAACTGGTGCTGTTTTATTTGACTCTTAGTGCAACTACAAAAGTATCTTCGGCGCTTTTTTGGCGTCTACTCATTGGCTCTTTAGTCATGGTGGTTGGTGAATTCTTAGGTGCCGCTGGATATATGAGCAAGGCCTTAGGATTTATTATTGGAATTGTTGGTTGGCTGTATGTTTTAGGTGAACTCTATATGGGTGAGGCTGGTAAAGCTAACGCGGTAAGCGACGATCAAGCTGTGCACTTTGCCTTTAATGGGCTGCGCCTTATTGTCACTATC WVLTHSIQLVLFYLTLSATTKVSSALFWRLLIGSLVMVVGEFLGAAGYMSKALGFIIGIVGWLYVLGELYMGEAGKANAVSDDQAVHFAFNGLRLIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------GTACTTACTCATAGTATCCAACTGGTGCTGTTTTATTTGACTCTTAGTGCA---------ACT---ACAAAAGTATCTTCG---GCGCTT------------------------------------TTTTGGCGT---CTACTCATTGGCTCTTTAGTCATGGTGGTTGGTGAATTCTTAGGTGCC---------GCT------------------GGA------TAT---------------------------------ATG------------------------------------------------------------------AGCAAG------------------GCCTTAGGA---TTTATTATTGGAATTGTTGGTTGGCTGTATGTTTTAGGTGAACTC---------------TAT------ATG---GGTGAGGCTGGTAAAGCTAACGCGGTA------AGC---GACGATCAAGCTGTG---CAC---TTT---GCC---TTT---AAT---GGGCTG---CGCCTTATTGTCACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------VLTHSIQLVLFYLTLSA---T-TKVSS-AL------------FWR-LLIGSLVMVVGEFLGA---A------G--Y-----------M----------------------SK------ALG-FIIGIVGWLYVLGEL-----Y--M-GEAGKANAV--S-DDQAV-H-F-A-F-N-GL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma1-b]_JX863112 [I-Gamma1-b] MALINA_OTU02_035_Q_env_samples_JX863112 gi|425477174|gb|JX863112| Uncultured bacterium clone MALINA OTU02 035 Q putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU02 035 Q putative proteorhodopsin gene, partial cds JX863112 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 1/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; L108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 07Aug2009 5m_depth Arctic Ocean marine 70.91 -128.92 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGGTACTTACTCATAGTATCCAACTGGTGCTGTTTTATTTGATTCTTAGTGCAACTACAAAAGTATCTTCGGCGCTTTTTTGGCGTCTACTCATTGGCTCTTTAGTCACGGTGGTTGGTGAATTCTTAGGTGCCGCTGGATATATGAGCAAGGCCTTAGGATTTATTATTGGCATTGTTGGTTGGCTGTATATTTTAGGTGAACTCTATATGGGTGAGGCTGGTAAAGCTAACGCGGTAAGCGACGATCAAGCTGTGCATTTTGCCTTTAATGGGCTGCGCCTTATTGTCACTATC WVLTHSIQLVLFYLILSATTKVSSALFWRLLIGSLVTVVGEFLGAAGYMSKALGFIIGIVGWLYILGELYMGEAGKANAVSDDQAVHFAFNGLRLIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------GTACTTACTCATAGTATCCAACTGGTGCTGTTTTATTTGATTCTTAGTGCA---------ACT---ACAAAAGTATCTTCG---GCGCTT------------------------------------TTTTGGCGT---CTACTCATTGGCTCTTTAGTCACGGTGGTTGGTGAATTCTTAGGTGCC---------GCT------------------GGA------TAT---------------------------------ATG------------------------------------------------------------------AGCAAG------------------GCCTTAGGA---TTTATTATTGGCATTGTTGGTTGGCTGTATATTTTAGGTGAACTC---------------TAT------ATG---GGTGAGGCTGGTAAAGCTAACGCGGTA------AGC---GACGATCAAGCTGTG---CAT---TTT---GCC---TTT---AAT---GGGCTG---CGCCTTATTGTCACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------VLTHSIQLVLFYLILSA---T-TKVSS-AL------------FWR-LLIGSLVTVVGEFLGA---A------G--Y-----------M----------------------SK------ALG-FIIGIVGWLYILGEL-----Y--M-GEAGKANAV--S-DDQAV-H-F-A-F-N-GL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma1-b]_JX863111 [I-Gamma1-b] MALINA_OTU02_023_Q_env_samples_JX863111 gi|425477172|gb|JX863111| Uncultured bacterium clone MALINA OTU02 023 Q putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU02 023 Q putative proteorhodopsin gene, partial cds JX863111 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 1/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; L108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 07Aug2009 5m_depth Arctic Ocean marine 70.91 -128.92 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGGTACTTACTTATAGTATCCAACTGGTGCTGTTTTATTTGATTCTTAGTGCAACTACAAAAGTGTCTTTGGCGCTTTTTTGGCGTCTACTCATTGGCTCTTTAGTCATGGTGGTTGGTGAATTCTTAGGTGCCGCTGGATATATGAGCAAGGCCTTAGGATTTATTATTGGCATTGTTGGTTGGCTGTATATTTTAGGTGAACTCTATATGGGTGAGGCTGGTAAAGCTAACGCGGCAAGCGACGATCAAGCTGTGCATTTTGCCTTTAATGGGCTGCGCCTTATTGTCACTATC WVLTYSIQLVLFYLILSATTKVSLALFWRLLIGSLVMVVGEFLGAAGYMSKALGFIIGIVGWLYILGELYMGEAGKANAASDDQAVHFAFNGLRLIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------GTACTTACTTATAGTATCCAACTGGTGCTGTTTTATTTGATTCTTAGTGCA---------ACT---ACAAAAGTGTCTTTG---GCGCTT------------------------------------TTTTGGCGT---CTACTCATTGGCTCTTTAGTCATGGTGGTTGGTGAATTCTTAGGTGCC---------GCT------------------GGA------TAT---------------------------------ATG------------------------------------------------------------------AGCAAG------------------GCCTTAGGA---TTTATTATTGGCATTGTTGGTTGGCTGTATATTTTAGGTGAACTC---------------TAT------ATG---GGTGAGGCTGGTAAAGCTAACGCGGCA------AGC---GACGATCAAGCTGTG---CAT---TTT---GCC---TTT---AAT---GGGCTG---CGCCTTATTGTCACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------VLTYSIQLVLFYLILSA---T-TKVSL-AL------------FWR-LLIGSLVMVVGEFLGA---A------G--Y-----------M----------------------SK------ALG-FIIGIVGWLYILGEL-----Y--M-GEAGKANAA--S-DDQAV-H-F-A-F-N-GL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma1-b]_JX863110 [I-Gamma1-b] MALINA_OTU02_163_Q_env_samples_JX863110 gi|425477170|gb|JX863110| Uncultured bacterium clone MALINA OTU02 163 Q putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU02 163 Q putative proteorhodopsin gene, partial cds JX863110 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 1/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; L108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 11Aug2009 80m_depth Arctic Ocean marine 70.68 -139.62 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGGTACTTACTCATAGTATCCAACTGGTGCTGTTTTATTTGATTCTTAGTGCAACTACAAAAGTATCTTCGGCGCTTTTTTGGCGTCTACTCATTGGCTCTTTAGTCATGGTGGTTGGTGAATTCTTAGGTGCCGCTGGATATATGAGCAAGGCCTTAGGATTTATTATTGGAATTGTTGGTTGGCTGTATATTTTAGGTGAACTCTATATGGGTGAGGCTGGTAAAGCTAACGCGGCAAGCGACGATCAAGCTGTGCATTTTGCCTTTAATGGGCTGCGCCTTATTGTCACTATC WVLTHSIQLVLFYLILSATTKVSSALFWRLLIGSLVMVVGEFLGAAGYMSKALGFIIGIVGWLYILGELYMGEAGKANAASDDQAVHFAFNGLRLIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------GTACTTACTCATAGTATCCAACTGGTGCTGTTTTATTTGATTCTTAGTGCA---------ACT---ACAAAAGTATCTTCG---GCGCTT------------------------------------TTTTGGCGT---CTACTCATTGGCTCTTTAGTCATGGTGGTTGGTGAATTCTTAGGTGCC---------GCT------------------GGA------TAT---------------------------------ATG------------------------------------------------------------------AGCAAG------------------GCCTTAGGA---TTTATTATTGGAATTGTTGGTTGGCTGTATATTTTAGGTGAACTC---------------TAT------ATG---GGTGAGGCTGGTAAAGCTAACGCGGCA------AGC---GACGATCAAGCTGTG---CAT---TTT---GCC---TTT---AAT---GGGCTG---CGCCTTATTGTCACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------VLTHSIQLVLFYLILSA---T-TKVSS-AL------------FWR-LLIGSLVMVVGEFLGA---A------G--Y-----------M----------------------SK------ALG-FIIGIVGWLYILGEL-----Y--M-GEAGKANAA--S-DDQAV-H-F-A-F-N-GL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma1-b]_JX863113 [I-Gamma1-b] MALINA_OTU02_039_Q_env_samples_JX863113 gi|425477176|gb|JX863113| Uncultured bacterium clone MALINA OTU02 039 Q putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU02 039 Q putative proteorhodopsin gene, partial cds JX863113 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 1/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; L108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 07Aug2009 5m_depth Arctic Ocean marine 70.91 -128.92 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGGTACTTACTCATAGTGTCCAACTGGTGCTGTTTTATTTGATTCTTAGTGCAACTACAAAAGTATCTTCGGCGCTTTTTTGGCGTCTACTCATTGGCTCTTTAGTCATGGTGGTTGGTGAATTCTTAGGTGCCGCTGGATATATGAGCAAGGCCTTAGGATTTATTATTGGCATTGTTGGTTGGCTGTATATTTTAGGTGAACTCTATATGGGTGAGGCTGGTAAAGCTAACGCGGCAAGCGACGATCAAGCTGTGCATTTTGCCTTTAATGGGCTGCGCCTTATTGTCACTATC WVLTHSVQLVLFYLILSATTKVSSALFWRLLIGSLVMVVGEFLGAAGYMSKALGFIIGIVGWLYILGELYMGEAGKANAASDDQAVHFAFNGLRLIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------GTACTTACTCATAGTGTCCAACTGGTGCTGTTTTATTTGATTCTTAGTGCA---------ACT---ACAAAAGTATCTTCG---GCGCTT------------------------------------TTTTGGCGT---CTACTCATTGGCTCTTTAGTCATGGTGGTTGGTGAATTCTTAGGTGCC---------GCT------------------GGA------TAT---------------------------------ATG------------------------------------------------------------------AGCAAG------------------GCCTTAGGA---TTTATTATTGGCATTGTTGGTTGGCTGTATATTTTAGGTGAACTC---------------TAT------ATG---GGTGAGGCTGGTAAAGCTAACGCGGCA------AGC---GACGATCAAGCTGTG---CAT---TTT---GCC---TTT---AAT---GGGCTG---CGCCTTATTGTCACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------VLTHSVQLVLFYLILSA---T-TKVSS-AL------------FWR-LLIGSLVMVVGEFLGA---A------G--Y-----------M----------------------SK------ALG-FIIGIVGWLYILGEL-----Y--M-GEAGKANAA--S-DDQAV-H-F-A-F-N-GL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma1-b]_JX863117 [I-Gamma1-b] MALINA_OTU02_174_Q_env_samples_JX863117 gi|425477184|gb|JX863117| Uncultured bacterium clone MALINA OTU02 174 Q putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU02 174 Q putative proteorhodopsin gene, partial cds JX863117 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 1/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; L108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 11Aug2009 80m_depth Arctic Ocean marine 70.68 -139.62 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGGTACTTACTCATAGTATCCAACTGGTGCTGTTTTATTTGATTCTTAGTGCAACTACAAAAGTATCTTCGGCGCTTTTTTGGCGTCTACTCATTGGCTCTTTAGTCATGGTGGTTGGTGAATTCTTAGGTGCCGCTGGATATATGAGCAAGGCCTTAGGATTTATTATTGGCATTGTTGGTTGGCTGTATATTTTAGGTGAACTCTATATGGGTGAGGCTGGTAAAACTAACGCGGCAAGCGACGATCAAGCTGTGCATTTTGCCTTTAATGGGCTGCGCCTTATTGTCACTATC WVLTHSIQLVLFYLILSATTKVSSALFWRLLIGSLVMVVGEFLGAAGYMSKALGFIIGIVGWLYILGELYMGEAGKTNAASDDQAVHFAFNGLRLIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------GTACTTACTCATAGTATCCAACTGGTGCTGTTTTATTTGATTCTTAGTGCA---------ACT---ACAAAAGTATCTTCG---GCGCTT------------------------------------TTTTGGCGT---CTACTCATTGGCTCTTTAGTCATGGTGGTTGGTGAATTCTTAGGTGCC---------GCT------------------GGA------TAT---------------------------------ATG------------------------------------------------------------------AGCAAG------------------GCCTTAGGA---TTTATTATTGGCATTGTTGGTTGGCTGTATATTTTAGGTGAACTC---------------TAT------ATG---GGTGAGGCTGGTAAAACTAACGCGGCA------AGC---GACGATCAAGCTGTG---CAT---TTT---GCC---TTT---AAT---GGGCTG---CGCCTTATTGTCACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------VLTHSIQLVLFYLILSA---T-TKVSS-AL------------FWR-LLIGSLVMVVGEFLGA---A------G--Y-----------M----------------------SK------ALG-FIIGIVGWLYILGEL-----Y--M-GEAGKTNAA--S-DDQAV-H-F-A-F-N-GL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma1-b]_JX863116 [I-Gamma1-b] MALINA_OTU02_145_Q_env_samples_JX863116 gi|425477182|gb|JX863116| Uncultured bacterium clone MALINA OTU02 145 Q putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU02 145 Q putative proteorhodopsin gene, partial cds JX863116 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 1/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; L108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 11Aug2009 80m_depth Arctic Ocean marine 70.68 -139.62 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGGTGCTTACTCATAGTATCCAACTAGTGTTGTTTTATTTGATCCTTAGCGCGACTACAAAAGTCTCTCCCGCTCTTTTTTGGCGTCTACTCATTGGCTCTTTGGTCATGGTGGTTGGAGAATTCTTGGGTGCGGCTGGATATATGAGCGAGGCCTTAGGATTTATTATTGGCATTGTGGGTTGGCTGTATATTTTGGGTGAACTCTATATGGGTGAGGCTGGTAAAGCTAACGCAGCATGTGGCGATCAAGCCGTGCATTTTGCATTTAATGGGCTGCGTCTTATTGTCACTATC WVLTHSIQLVLFYLILSATTKVSPALFWRLLIGSLVMVVGEFLGAAGYMSEALGFIIGIVGWLYILGELYMGEAGKANAACGDQAVHFAFNGLRLIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------GTGCTTACTCATAGTATCCAACTAGTGTTGTTTTATTTGATCCTTAGCGCG---------ACT---ACAAAAGTCTCTCCC---GCTCTT------------------------------------TTTTGGCGT---CTACTCATTGGCTCTTTGGTCATGGTGGTTGGAGAATTCTTGGGTGCG---------GCT------------------GGA------TAT---------------------------------ATG------------------------------------------------------------------AGCGAG------------------GCCTTAGGA---TTTATTATTGGCATTGTGGGTTGGCTGTATATTTTGGGTGAACTC---------------TAT------ATG---GGTGAGGCTGGTAAAGCTAACGCAGCA------TGT---GGCGATCAAGCCGTG---CAT---TTT---GCA---TTT---AAT---GGGCTG---CGTCTTATTGTCACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------VLTHSIQLVLFYLILSA---T-TKVSP-AL------------FWR-LLIGSLVMVVGEFLGA---A------G--Y-----------M----------------------SE------ALG-FIIGIVGWLYILGEL-----Y--M-GEAGKANAA--C-GDQAV-H-F-A-F-N-GL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma1-b]_JX863114 [I-Gamma1-b] MALINA_OTU02_191_Q_env_samples_JX863114 gi|425477178|gb|JX863114| Uncultured bacterium clone MALINA OTU02 191 Q putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU02 191 Q putative proteorhodopsin gene, partial cds JX863114 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 1/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; L108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 11Aug2009 80m_depth Arctic Ocean marine 70.68 -139.62 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGGTGCTTACTCATAGTATCCAACTAGTGTTGTTTTATTTGATCCTTAGCGCGACTACAAAAGTCTCTCCCGCTCTTTTTTGGCGTCTACTCATTGGCTCTTTGGTCATGGTGGTTGGAGAATTCTTGGGTGCGGCTGGATATATGAGCGAGGCCTTAGGATTTATTATTGGCATTGTGGGTTGGCTGTATATTTTGGGTGAACTCTATATGGGTGAGGCTGGTAAAGCTAACGCAGCATGTGACGATCAAGCCGTGCATTTTGCATTTAATGGGCTGCGTCTTATTGTCACTATC WVLTHSIQLVLFYLILSATTKVSPALFWRLLIGSLVMVVGEFLGAAGYMSEALGFIIGIVGWLYILGELYMGEAGKANAACDDQAVHFAFNGLRLIVTI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------GTGCTTACTCATAGTATCCAACTAGTGTTGTTTTATTTGATCCTTAGCGCG---------ACT---ACAAAAGTCTCTCCC---GCTCTT------------------------------------TTTTGGCGT---CTACTCATTGGCTCTTTGGTCATGGTGGTTGGAGAATTCTTGGGTGCG---------GCT------------------GGA------TAT---------------------------------ATG------------------------------------------------------------------AGCGAG------------------GCCTTAGGA---TTTATTATTGGCATTGTGGGTTGGCTGTATATTTTGGGTGAACTC---------------TAT------ATG---GGTGAGGCTGGTAAAGCTAACGCAGCA------TGT---GACGATCAAGCCGTG---CAT---TTT---GCA---TTT---AAT---GGGCTG---CGTCTTATTGTCACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------VLTHSIQLVLFYLILSA---T-TKVSP-AL------------FWR-LLIGSLVMVVGEFLGA---A------G--Y-----------M----------------------SE------ALG-FIIGIVGWLYILGEL-----Y--M-GEAGKANAA--C-DDQAV-H-F-A-F-N-GL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamm1-IMCC2047]_NZ_AEGL01000596 [I-Gamm1-IMCC2047] IMCC2047_Gammaproteobacteria_NZ_AEGL01000596 gi|339061878|gb|NZ_AEGL01000596| Gamma proteobacterium IMCC2047 ctg918, whole genome shotgun sequence Gamma proteobacterium IMCC2047 ctg918, whole genome shotgun sequence NZ_AEGL01000596 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 1/IMCC2047-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 1 IMCC2047-like subcluster proteorhodopsin proton pump D97 ; L108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/Proteobacteria/Gammaproteobacteria] #na genomic_DNA strain 10-May-2013 #na #na China Sea marine 35.492474 126.157492 Genome Sequence of Strain IMCC2047, a Novel Marine Member of the Gammaproteobacteria Kang,I., Kang,D., Oh,H.M., Kim,H., Kim,H.J., Kang,T.W., Kim,S.Y. and Cho,J.C. J. Bacteriol. 193 (14), 36883689 (2011) 21602327 #na ATGGCCATGATTGGAGCCACCATTTTCTTCCTTCTGGAAAGAAATAGGGTTGCCAGCAGGTGGCAGACGACGATCACCTTAACAGGTGTCGTGATGCTGGTTTCTGCAATTTTTTACCACTATGTGAAAAGCATGTGGGTGGATACCGGTTCAGCGCCGATCATTCTGCGCTATGTCGACTGGGTGCTTTCGCACTCGATGCAGGTGGTGTTGTTTTACGTGGTATTGACGGCTGTTACCAAAGTGTCGCCAGCGTTGTTTTGGCGATTGCTTATTGGTTCGTTGGTGATGGTCATTGGCGAGTTCCTGGGTGCTGCCGGCTACATGAGCGCAACGCTGGGTTTCATCATCGGTGTGGTCGGCTGGCTGTACATCCTCGGTGAACTCTATATGGGTGAAGCAGGCCGGGCTAATGCGGACAGCGGTAACGAATCGACAAACATGGCGTTTAACGGCTTGCGACTGATTGTCACCATTGGTTGGGCGATTTACCCATTGGGTTATTTCATCAACAACCTGGGTGGTGGCGTCGACGCCAACAGCCTGAACATCATTTATAACCTGGCTGACTTTTTGAACAAAATTATCTTTGGCTTCGTAATTTATAGGGCTGCTATGAATGACACCAAAGCAATAAACCAACCCGTTACAGAAACAACCAAA MAMIGATIFFLLERNRVASRWQTTITLTGVVMLVSAIFYHYVKSMWVDTGSAPIILRYVDWVLSHSMQVVLFYVVLTAVTKVSPALFWRLLIGSLVMVIGEFLGAAGYMSATLGFIIGVVGWLYILGELYMGEAGRANADSGNESTNMAFNGLRLIVTIGWAIYPLGYFINNLGGGVDANSLNIIYNLADFLNKIIFGFVIYRAAMNDTKAINQPVTETTK ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGCCATGATTGGAGCCACCATTTTCTTCCTTCTGGAAAGAAATAGGGTTGCCAGC---AGGTGGCAGACGACGATCACCTTAACAGGTGTCGTGATGCTGGTTTCTGCAATTTTTTACCACTATGTGAAAAGCATGTGGGTG---------------------------------------------------GATACCGGTTCAGCGCCGATCATTCTGCGCTATGTCGACTGG------------------------GTGCTTTCGCACTCGATGCAGGTGGTGTTGTTTTACGTGGTATTGACGGCT---------GTT---ACCAAAGTGTCGCCA---GCGTTG------------------------------------TTTTGGCGA---TTGCTTATTGGTTCGTTGGTGATGGTCATTGGCGAGTTCCTGGGTGCT---------GCC------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AGCGCA------------------ACGCTGGGT---TTCATCATCGGTGTGGTCGGCTGGCTGTACATCCTCGGTGAACTC---------------TAT------ATG---GGTGAAGCAGGCCGGGCTAATGCGGAC------AGC---GGTAACGAATCGACA---AAC---ATG---GCG---TTT---AAC---GGCTTG---CGACTGATTGTCACCATT---------------------------------------------------------------GGTTGG---------GCGATTTACCCATTGGGTTATTTCATCAACAACCTG---------------------------------------GGTGGTGGCGTCGACGCCAACAGCCTGAACATCATTTATAACCTGGCTGACTTTTTGAACAAAATTATCTTTGGCTTCGTAATTTATAGGGCTGCTATGAATGAC---ACCAAAGCAATAAACCAACCCGTTACA---------------------GAAACAACCAAA--------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------MAMIGATIFFLLERNRVAS-RWQTTITLTGVVMLVSAIFYHYVKSMWV-----------------DTGSAPIILRYVDW--------VLSHSMQVVLFYVVLTA---V-TKVSP-AL------------FWR-LLIGSLVMVIGEFLGA---A------G--Y-----------M----------------------SA------TLG-FIIGVVGWLYILGEL-----Y--M-GEAGRANAD--S-GNEST-N-M-A-F-N-GL-RLIVTI---------------------GW---AIYPLGYFINNL-------------GGGVDANSLNIIYNLADFLNKIIFGFVIYRAAMND-TKAINQPVT-------ETTK--------------------- [I-Gamm1-IMCC2047]_KJ926159 [I-Gamm1-IMCC2047] BOUM_OTU072_env_samples gb|KJ926159| Uncultured bacterium clone BOUM OTU072 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU072 putative proteorhodopsin gene, partial cds KJ926159 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 1/IMCC2047-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 1 IMCC2047-like subcluster proteorhodopsin proton pump E97 ; L108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 38.96217 14.32367 #na #na #na #na #na GTCGAGTGGATACTGACTCATTCTATGCAGGTAGTTCTTTTTTATGTCATTTTGACCGCAGTAACTAAAGTCTCATCTGCACTCTTCTGGAGACTTTTAATTGGAACTTTAGTAATGGTGATTGGTGAGTTTTTGGGTACTGCTGGCTATATGAGCGCAACATTAGGATTTATTATTGGAATAGTGGGTTGGCTTTATATCCTTGGTGAGTTATACATGGGGGAGGCAAGTCGCTGCAATATTGAGAGTGGCAACGAGGCTACCCATATGGCATTTAATGGATTAAGGCTAATTCTAACTATTGGCTGGGCTATCTAC VEWILTHSMQVVLFYVILTAVTKVSSALFWRLLIGTLVMVIGEFLGTAGYMSATLGFIIGIVGWLYILGELYMGEASRCNIESGNEATHMAFNGLRLILTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCGAGTGG------------------------ATACTGACTCATTCTATGCAGGTAGTTCTTTTTTATGTCATTTTGACCGCA---------GTA---ACTAAAGTCTCATCT---GCACTC------------------------------------TTCTGGAGA---CTTTTAATTGGAACTTTAGTAATGGTGATTGGTGAGTTTTTGGGTACT---------GCT------------------GGC------TAT---------------------------------ATG------------------------------------------------------------------AGCGCA------------------ACATTAGGA---TTTATTATTGGAATAGTGGGTTGGCTTTATATCCTTGGTGAGTTA---------------TAC------ATG---GGGGAGGCAAGTCGCTGCAATATTGAG------AGT---GGCAACGAGGCTACC---CAT---ATG---GCA---TTT---AAT---GGATTA---AGGCTAATTCTAACTATT---------------------------------------------------------------GGCTGG---------GCTATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VEW--------ILTHSMQVVLFYVILTA---V-TKVSS-AL------------FWR-LLIGTLVMVIGEFLGT---A------G--Y-----------M----------------------SA------TLG-FIIGIVGWLYILGEL-----Y--M-GEASRCNIE--S-GNEAT-H-M-A-F-N-GL-RLILTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [I-Gamm1-IMCC2047]_1105165732638 [I-Gamm1-IMCC2047] JCVI_ORF_1105165732638_GS031_Coastal_upwelling_12m jcvi|1105165732638| 1105165732638 JCVI ORF 1105165732638 1105165732638 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 1/IMCC2047-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 1 IMCC2047-like subcluster proteorhodopsin proton pump D97 ; M108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 10-FEB-2004 Coastal_upwelling/12m_depth/S_n.a/GS031/Upwelling/Fernandina_Island/Galapagos_Islands Pacific Ocean marine -0.3011111 -91.651665 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATTTATATGAACAGTACATTATTACCAACTGACATTGTAGGTGGCACATTTTGGCTGCTATCTATGGCATTGATTGGTGCATCAATCTTCTTTTTATTGGAAAGAAATAGGGTTGATGGAAGATGGCATACAACTATGACTCTGCTCGGGGTCACAATGTTGATTTCAGCAATATTCTACTACTATGTTCAGGGGATGTGGGTTGACACGGGTAAAGCTCCAATCGTGCTTCGATATTTAGATTGGATCCTGACACATTCTATGCAGGTTGTAATGTTTTATGTCATTTTGACCGCAGTAACTAAAGTCTCATCTGCACTATTTTGGAGGCTACTAATTGGATCCTTAGTGATGGTGATTGGTGAATTTTTGGGTGCTGCTGGTTATATGAGCGCAACATTAGGCTTCATTATTGGAGTAGTTGGTTGGCTATATATTCTTGGCGAGATTTATATGGGGGAGGCAAGTCGCTGCAATATAGAGAGTGGTAACGAGGCTACCCATATGGCATTTAATGGATTAAGACTAATCTTAACTATTGGTTGGGCTATTTATCCTCTTGGCTATTTTATTAATAATTTGGGTGGTGGAGTAGATGCTAACAGTCTTAATATTATTTATAACTTAACTGACTTTTTAAACAAAATTATTTTTGGGTTTGTTGTATATAGAGCTGCTATGAATGACACTTACCAACCCGTA IYMNSTLLPTDIVGGTFWLLSMALIGASIFFLLERNRVDGRWHTTMTLLGVTMLISAIFYYYVQGMWVDTGKAPIVLRYLDWILTHSMQVVMFYVILTAVTKVSSALFWRLLIGSLVMVIGEFLGAAGYMSATLGFIIGVVGWLYILGEIYMGEASRCNIESGNEATHMAFNGLRLILTIGWAIYPLGYFINNLGGGVDANSLNIIYNLTDFLNKIIFGFVVYRAAMNDTYQPV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTATATGAACAGTACATTATTACCAACTGACATTGTAGGT---------------------GGCACATTTTGGCTGCTATCTATGGCATTGATTGGTGCATCAATCTTCTTTTTATTGGAAAGAAATAGGGTTGATGGA---AGATGGCATACAACTATGACTCTGCTCGGGGTCACAATGTTGATTTCAGCAATATTCTACTACTATGTTCAGGGGATGTGGGTT---------------------------------------------------GACACGGGTAAAGCTCCAATCGTGCTTCGATATTTAGATTGG------------------------ATCCTGACACATTCTATGCAGGTTGTAATGTTTTATGTCATTTTGACCGCA---------GTA---ACTAAAGTCTCATCT---GCACTA------------------------------------TTTTGGAGG---CTACTAATTGGATCCTTAGTGATGGTGATTGGTGAATTTTTGGGTGCT---------GCT------------------GGT------TAT---------------------------------ATG------------------------------------------------------------------AGCGCA------------------ACATTAGGC---TTCATTATTGGAGTAGTTGGTTGGCTATATATTCTTGGCGAGATT---------------TAT------ATG---GGGGAGGCAAGTCGCTGCAATATAGAG------AGT---GGTAACGAGGCTACC---CAT---ATG---GCA---TTT---AAT---GGATTA---AGACTAATCTTAACTATT---------------------------------------------------------------GGTTGG---------GCTATTTATCCTCTTGGCTATTTTATTAATAATTTG---------------------------------------GGTGGTGGAGTAGATGCTAACAGTCTTAATATTATTTATAACTTAACTGACTTTTTAAACAAAATTATTTTTGGGTTTGTTGTATATAGAGCTGCTATGAATGAC---ACTTACCAACCCGTA------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------IYMNSTLLPTDIVG-------GTFWLLSMALIGASIFFLLERNRVDG-RWHTTMTLLGVTMLISAIFYYYVQGMWV-----------------DTGKAPIVLRYLDW--------ILTHSMQVVMFYVILTA---V-TKVSS-AL------------FWR-LLIGSLVMVIGEFLGA---A------G--Y-----------M----------------------SA------TLG-FIIGVVGWLYILGEI-----Y--M-GEASRCNIE--S-GNEAT-H-M-A-F-N-GL-RLILTI---------------------GW---AIYPLGYFINNL-------------GGGVDANSLNIIYNLTDFLNKIIFGFVVYRAAMND-TYQPV------------------------------------ [I-Gamm1-IMCC2047]_1105120252376 [I-Gamm1-IMCC2047] JCVI_ORF_1105120252376_GS008_Coastal_1m jcvi|1105120252376| 1105120252376 JCVI ORF 1105120252376 1105120252376 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 1/IMCC2047-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 1 IMCC2047-like subcluster proteorhodopsin proton pump D97 ; L108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 16-nov-03 Coastal/1m_depth/S_26.5_psu/GS008/Newport_Harbor/RI/North_American_East_Coast Atlantic Ocean marine 41.485832 -71.35111 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf AACAGCACATTATTACCCACGGACATTGTAGGGGAACTTTTGGCTTCTATCTATGGCAATGATTGGTGCGTCAATTTTCTTTTACTTGAGAGAACAAAGGTTGCTAGCAGATGGCACACAACCATGACTTTGCTTGGCGTAGTCATGCTAATTTCAGCAGTTTTCTATCATTATGTTAAGACTATGTGGGTTGACACAGGTTCGGCTCCAATCATTCTCAGATATTTAGATTGGATACTCACACATACAATGCAAATTGTTTTGTTTTATATTATTTTGTCAGCAGTGACGAAAGTTTCGTCAGCATTATTTTGGCGTTTATTGATTGGATCTTTAGTGATGGTTATAGGTGAGTTTTTAGGTGCAGCAGGATATATGAGTGCAACACTGGGATTCATCATAGGCGTAGTGGGGTGGCTCTATATTCTTGGAGAGCTTTATATGGGTGAAGCTGGACGAGCCAATATAGAAAGTGGAAATGAAGCCACTCACATGGCTTTTAATGGACTGAGACTGATTTTGACTATAGGTTGGGCAATATACCCACTGGGTTATTTTATAAATAATCTTGGAGGGGGTATTGATGTTAATAGCTTAAATATTGTCTATAACTTAAGTGATTTTTTAAATAAAGTGATTTTTGGATTTGTAATTTATCGAGCTGCAATGAATGACACTCAGCTGATAAACGAGAGCAAG NSTLLPTDIVGELLASIYGNDWCVNFLLLERTKVASRWHTTMTLLGVVMLISAVFYHYVKTMWVDTGSAPIILRYLDWILTHTMQIVLFYIILSAVTKVSSALFWRLLIGSLVMVIGEFLGAAGYMSATLGFIIGVVGWLYILGELYMGEAGRANIESGNEATHMAFNGLRLILTIGWAIYPLGYFINNLGGGIDVNSLNIVYNLSDFLNKVIFGFVIYRAAMNDTQLINESK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAGCACATTATTACCCACGGACATTGTAGGGGAACTTTTGGCTTCTATCTATGGCAATGATTGGTGCGTCAAT------------------------TTTCTTTTACTTGAGAGAACAAAGGTTGCTAGC---AGATGGCACACAACCATGACTTTGCTTGGCGTAGTCATGCTAATTTCAGCAGTTTTCTATCATTATGTTAAGACTATGTGGGTT---------------------------------------------------GACACAGGTTCGGCTCCAATCATTCTCAGATATTTAGATTGG------------------------ATACTCACACATACAATGCAAATTGTTTTGTTTTATATTATTTTGTCAGCA---------GTG---ACGAAAGTTTCGTCA---GCATTA------------------------------------TTTTGGCGT---TTATTGATTGGATCTTTAGTGATGGTTATAGGTGAGTTTTTAGGTGCA---------GCA------------------GGA------TAT---------------------------------ATG------------------------------------------------------------------AGTGCA------------------ACACTGGGA---TTCATCATAGGCGTAGTGGGGTGGCTCTATATTCTTGGAGAGCTT---------------TAT------ATG---GGTGAAGCTGGACGAGCCAATATAGAA------AGT---GGAAATGAAGCCACT---CAC---ATG---GCT---TTT---AAT---GGACTG---AGACTGATTTTGACTATA---------------------------------------------------------------GGTTGG---------GCAATATACCCACTGGGTTATTTTATAAATAATCTT---------------------------------------GGAGGGGGTATTGATGTTAATAGCTTAAATATTGTCTATAACTTAAGTGATTTTTTAAATAAAGTGATTTTTGGATTTGTAATTTATCGAGCTGCAATGAATGAC---ACTCAGCTGATAAACGAGAGCAAG--------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------NSTLLPTDIVGELLASIYGNDWCVN--------FLLLERTKVAS-RWHTTMTLLGVVMLISAVFYHYVKTMWV-----------------DTGSAPIILRYLDW--------ILTHTMQIVLFYIILSA---V-TKVSS-AL------------FWR-LLIGSLVMVIGEFLGA---A------G--Y-----------M----------------------SA------TLG-FIIGVVGWLYILGEL-----Y--M-GEAGRANIE--S-GNEAT-H-M-A-F-N-GL-RLILTI---------------------GW---AIYPLGYFINNL-------------GGGIDVNSLNIVYNLSDFLNKVIFGFVIYRAAMND-TQLINESK--------------------------------- [I-Gamm1-IMCC2047]_1105153859382 [I-Gamm1-IMCC2047] JCVI_ORF_1105153859382_GS008_Coastal_1m jcvi|1105153859382| 1105153859382 JCVI ORF 1105153859382 1105153859382 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 1/IMCC2047-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 1 IMCC2047-like subcluster proteorhodopsin proton pump D97 ; L108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 16-nov-03 Coastal/1m_depth/S_26.5_psu/GS008/Newport_Harbor/RI/North_American_East_Coast Atlantic Ocean marine 41.485832 -71.35111 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGAACAGCACATTATTACCAACGGACATTGTAGGGGGAACTTTTTGGCTTCTATCTATGGCAATGATTGGTGCGTCAATTTTCTTTTTACTTGAGAGAACAAAGGTTGCTAGCAGATGGCACACAACCATGACTTTGCTTGGCGTAGTCATGCTAATTTCAGCAGTTTTCTATCATTATGTTAAGACTATGTGGGTTGACACAGGTTCGGCTCCAATCATTCTCAGATATTTAGATTGGATACTCACACATACAATGCAAATTGTTTTGTTTTATATTATTTTGTCAGCAGTGACGAAAGTTTCGTCAGCATTATTTTGGCGTTTATTGATTGGATCTTTAGTGATGGTTATAGGTGAGTTTTTAGGTGCAGCAGGATATATGAGTGCAACACTGGGATTCATCATAGGCGTAGTGGGGTGGCTCTATATTCTTGGAGAGCTTTATATGGGTGAAGCTGGACGAGCCAATATAGAAAGTGGAAATGAAGCCACTCACATGGCTTTTAATGGACTGAGACTGATTTTGACTATAGGTTGGGCAATATACCCACTGGGTTATTTTATAAATAATCTTGGAGGGGGTATTGATGTTAATAGCTTAAATATTGTCTATAACTTAAGTGATTTTTTAAATAAAGTGATTTTTGGATTTGTAATTTATCGAGCTGCA MNSTLLPTDIVGGTFWLLSMAMIGASIFFLLERTKVASRWHTTMTLLGVVMLISAVFYHYVKTMWVDTGSAPIILRYLDWILTHTMQIVLFYIILSAVTKVSSALFWRLLIGSLVMVIGEFLGAAGYMSATLGFIIGVVGWLYILGELYMGEAGRANIESGNEATHMAFNGLRLILTIGWAIYPLGYFINNLGGGIDVNSLNIVYNLSDFLNKVIFGFVIYRAA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAACAGCACATTATTACCAACGGACATTGTAGGG---------------------GGAACTTTTTGGCTTCTATCTATGGCAATGATTGGTGCGTCAATTTTCTTTTTACTTGAGAGAACAAAGGTTGCTAGC---AGATGGCACACAACCATGACTTTGCTTGGCGTAGTCATGCTAATTTCAGCAGTTTTCTATCATTATGTTAAGACTATGTGGGTT---------------------------------------------------GACACAGGTTCGGCTCCAATCATTCTCAGATATTTAGATTGG------------------------ATACTCACACATACAATGCAAATTGTTTTGTTTTATATTATTTTGTCAGCA---------GTG---ACGAAAGTTTCGTCA---GCATTA------------------------------------TTTTGGCGT---TTATTGATTGGATCTTTAGTGATGGTTATAGGTGAGTTTTTAGGTGCA---------GCA------------------GGA------TAT---------------------------------ATG------------------------------------------------------------------AGTGCA------------------ACACTGGGA---TTCATCATAGGCGTAGTGGGGTGGCTCTATATTCTTGGAGAGCTT---------------TAT------ATG---GGTGAAGCTGGACGAGCCAATATAGAA------AGT---GGAAATGAAGCCACT---CAC---ATG---GCT---TTT---AAT---GGACTG---AGACTGATTTTGACTATA---------------------------------------------------------------GGTTGG---------GCAATATACCCACTGGGTTATTTTATAAATAATCTT---------------------------------------GGAGGGGGTATTGATGTTAATAGCTTAAATATTGTCTATAACTTAAGTGATTTTTTAAATAAAGTGATTTTTGGATTTGTAATTTATCGAGCTGCA--------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------MNSTLLPTDIVG-------GTFWLLSMAMIGASIFFLLERTKVAS-RWHTTMTLLGVVMLISAVFYHYVKTMWV-----------------DTGSAPIILRYLDW--------ILTHTMQIVLFYIILSA---V-TKVSS-AL------------FWR-LLIGSLVMVIGEFLGA---A------G--Y-----------M----------------------SA------TLG-FIIGVVGWLYILGEL-----Y--M-GEAGRANIE--S-GNEAT-H-M-A-F-N-GL-RLILTI---------------------GW---AIYPLGYFINNL-------------GGGIDVNSLNIVYNLSDFLNKVIFGFVIYRAA--------------------------------------------- [I-env4]_1105095773150 [I-env4] JCVI_ORF_1105095773150_GS017_Open_Ocean_2m jcvi|1105095773150| 1105095773150 JCVI ORF 1105095773150 1105095773150 [[proteorhodopsin super-cluster I/env cluster 4]] proteorhodopsin super-cluster I env cluster 4 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 09-janv-04 Open_Ocean/2m_depth/S_35.8_psu/GS017/Yucatan_Channel/Caribbean_Sea Caribbean Sea marine 20.5225 -85.41361 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATGGAATCTGTGCTGAGACCCGATGATTTTGTCGGAATATCGTTTTTCGTAGCTACTATGGCTATGATGGCGTCTGCAGTTTTCTTTTTCTTTGAAAGAGGTAGTGTAAAAGGAAAATGGAAAACATCACTAACTGTTGCAGGACTTATAACTGGTGTTGCAGCAATTCACTATTTGTATATGAGAGACATGTGGGTAGAGACTCAACAAAGTCCCACAGTTTTTCGTTATATTGACTGGCTTATAACTGTCCCTTTACAAATAGTTGAGTTTTATTTAATCCTTGCGGCAATAACAATTGTCCCAGTGGCTCTATTCTGGAGGCTGCTAATCTATTCATTAGTAATGTTAGTTTTTGGGTATCTCGGAGAAGCTGGTTTTATGAATGTAACACTCGGATTTGTTATAGGTATGGCCGGTTGGCTGCTCATACTGTATGAAATATTTGCAGGTGAAGCAAGTAAGATTAATGCAGATTCTGCAAATGCCTCTTGCCAAAAAGCCTTTAATGCTTTGAGATTGATAGTAACGATAGGTTGGGCAATATATCCGATAGGTTATGTGTTTGGATATCTTTTAGAATCTTCAAATATAAATGCTGTAAACATAATTTATAACTATGCTGACTTGATAAACAAAACAGCTTTTGGATTAGTTATTTGGGCTGCAGCAATTAAAGATTCTGAAGCTTCCGCT MESVLRPDDFVGISFFVATMAMMASAVFFFFERGSVKGKWKTSLTVAGLITGVAAIHYLYMRDMWVETQQSPTVFRYIDWLITVPLQIVEFYLILAAITIVPVALFWRLLIYSLVMLVFGYLGEAGFMNVTLGFVIGMAGWLLILYEIFAGEASKINADSANASCQKAFNALRLIVTIGWAIYPIGYVFGYLLESSNINAVNIIYNYADLINKTAFGLVIWAAAIKDSEASA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGAATCTGTGCTGAGACCCGATGATTTTGTCGGAATATCGTTTTTCGTAGCTACTATGGCTATGATGGCGTCTGCAGTTTTCTTTTTCTTTGAAAGAGGTAGTGTAAAAGGA---AAATGGAAAACATCACTAACTGTTGCAGGACTTATAACTGGTGTTGCAGCAATTCACTATTTGTATATGAGAGACATGTGGGTA------------------------------GAGACT---------------------CAACAAAGTCCCACAGTTTTTCGTTATATTGACTGG------------------------CTTATAACTGTCCCTTTACAAATAGTTGAGTTTTATTTAATCCTTGCGGCA---------ATA---ACAATTGTCCCAGTG---GCTCTA------------------------------------TTCTGGAGG---CTGCTAATCTATTCATTAGTAATGTTAGTTTTTGGGTATCTCGGAGAA---------GCT------------------GGT------TTT---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTCGGA---TTTGTTATAGGTATGGCCGGTTGGCTGCTCATACTGTATGAAATA---------------TTT------GCA---GGTGAAGCAAGTAAGATTAATGCAGAT------TCT---GCAAATGCCTCTTGC---CAA---AAA---GCC---TTT---AAT---GCTTTG---AGATTGATAGTAACGATA---------------------------------------------------------------GGTTGG---------GCAATATATCCGATAGGTTATGTGTTTGGATATCTTTTA---GAATCT---------------------------TCAAATATA---------AATGCTGTAAACATAATTTATAACTATGCTGACTTGATAAACAAAACAGCTTTTGGATTAGTTATTTGGGCTGCAGCAATTAAAGAT---TCTGAAGCTTCCGCT------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------MESVLRPDDFVGISFFVATMAMMASAVFFFFERGSVKG-KWKTSLTVAGLITGVAAIHYLYMRDMWV----------ET-------QQSPTVFRYIDW--------LITVPLQIVEFYLILAA---I-TIVPV-AL------------FWR-LLIYSLVMLVFGYLGE---A------G--F-----------M----------------------NV------TLG-FVIGMAGWLLILYEI-----F--A-GEASKINAD--S-ANASC-Q-K-A-F-N-AL-RLIVTI---------------------GW---AIYPIGYVFGYLL-ES---------SNI---NAVNIIYNYADLINKTAFGLVIWAAAIKD-SEASA------------------------------------ [I-env4]_DQ203747 [I-env4] SS114a0B12_env_samples_DQ203747 gi|77547942|gb|DQ203747| Uncultured bacterium clone SS114a0B12 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a0B12 predicted proteorhodopsin gene, partial cds DQ203747 [[proteorhodopsin super-cluster I/env cluster 4]] proteorhodopsin super-cluster I env cluster 4 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGATTGGCTAATAACTGTCCCTTTGCAAATAGTCGAATTTTATTTAATCCTTGCGGCAATAACGATTGTCCCAGCGGCCCTATTCTGGAGACTTCTTATATATTCATTAGTAATGTTAGTTTTTGGGTATCTCGGAGAAGCTGGCTTTATGAATGTAACTCTCGGATTTGTTATAGGTATGGCTGGCTGGTTGCTCATCCTGTATGAAATATTTGCAGGTGAGGCAAGTAAGATTAATGCGGATTCTGCAAATGCCTCTTGTCAAAAAGCCTTTAATGCTTTGAGATTAATAGTAACGATAGGTTGGGCCATATATCCA RYIDWLITVPLQIVEFYLILAAITIVPAALFWRLLIYSLVMLVFGYLGEAGFMNVTLGFVIGMAGWLLILYEIFAGEASKINADSANASCQKAFNALRLIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGATTGG------------------------CTAATAACTGTCCCTTTGCAAATAGTCGAATTTTATTTAATCCTTGCGGCA---------ATA---ACGATTGTCCCAGCG---GCCCTA------------------------------------TTCTGGAGA---CTTCTTATATATTCATTAGTAATGTTAGTTTTTGGGTATCTCGGAGAA---------GCT------------------GGC------TTT---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTCGGA---TTTGTTATAGGTATGGCTGGCTGGTTGCTCATCCTGTATGAAATA---------------TTT------GCA---GGTGAGGCAAGTAAGATTAATGCGGAT------TCT---GCAAATGCCTCTTGT---CAA---AAA---GCC---TTT---AAT---GCTTTG---AGATTAATAGTAACGATA---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---I-TIVPA-AL------------FWR-LLIYSLVMLVFGYLGE---A------G--F-----------M----------------------NV------TLG-FVIGMAGWLLILYEI-----F--A-GEASKINAD--S-ANASC-Q-K-A-F-N-AL-RLIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-env4]_DQ203800 [I-env4] SS114a40A6_env_samples_DQ203800 gi|77548048|gb|DQ203800| Uncultured bacterium clone SS114a40A6 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone SS114a40A6 predicted proteorhodopsin gene, partial cds DQ203800 [[proteorhodopsin super-cluster I/env cluster 4]] proteorhodopsin super-cluster I env cluster 4 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_40m_at_station_BATS114a_from_the_Sargasso_Sea_in_March_1998 Sargasso Sea marine 31.6667 -64.1667 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGATTGGCTTATAACTGTCCCTTTGCAGATAGTTGAATTTTATTTAATCCTTGCGGCAATAACGATTGTCCCTGCGGCTCTATTCTGGAGACTCCTAATCTATTCATTAGTAATGTTAGTTTTTGGATATCTCGGAGAAGCTGGCTTTATGAATGTAACACTCGGGTTTGTTATAGGTATGGCTGGTTGGTTGCTCATCCTATATGAAATATTTGCAGGGGAAGCAAGCAAGATTAATGCAGATTCTGCAAATGCCTCTTGTCAAAAAGCCTTTAATGCTTTGAGATTAATAGTAACGATAGGTTGGGCCATCTATCCA RYIDWLITVPLQIVEFYLILAAITIVPAALFWRLLIYSLVMLVFGYLGEAGFMNVTLGFVIGMAGWLLILYEIFAGEASKINADSANASCQKAFNALRLIVTIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGATTGG------------------------CTTATAACTGTCCCTTTGCAGATAGTTGAATTTTATTTAATCCTTGCGGCA---------ATA---ACGATTGTCCCTGCG---GCTCTA------------------------------------TTCTGGAGA---CTCCTAATCTATTCATTAGTAATGTTAGTTTTTGGATATCTCGGAGAA---------GCT------------------GGC------TTT---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTCGGG---TTTGTTATAGGTATGGCTGGTTGGTTGCTCATCCTATATGAAATA---------------TTT------GCA---GGGGAAGCAAGCAAGATTAATGCAGAT------TCT---GCAAATGCCTCTTGT---CAA---AAA---GCC---TTT---AAT---GCTTTG---AGATTAATAGTAACGATA---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQIVEFYLILAA---I-TIVPA-AL------------FWR-LLIYSLVMLVFGYLGE---A------G--F-----------M----------------------NV------TLG-FVIGMAGWLLILYEI-----F--A-GEASKINAD--S-ANASC-Q-K-A-F-N-AL-RLIVTI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [I-env4]_KJ926105 [I-env4] BOUM_OTU018_env_samples gb|KJ926105| Uncultured bacterium clone BOUM OTU018 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU018 putative proteorhodopsin gene, partial cds KJ926105 [[proteorhodopsin super-cluster I/env cluster 4]] proteorhodopsin super-cluster I env cluster 4 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 33.709667 32.644667 #na #na #na #na #na GTTGATTGGCTTATAACTGTTCCTTTGCAAATAGTTGAATTTTATTTAATCCTTGCGGCAATAACGATTGTCCCTGCGGCTCTATTCTGGAGACTCCTAATCTATTCATTAGTAATGTTAGTTTTTGGGTATCTCGGAGAAGCTGGCTTTATGAATGTAACACTCGGTTTTGTTATAGGTATGGCTGGTTGGTTGCTCATCCTGTATGAAATATTTGCAGGAGAAGCAAGCAAGATTAATGCAGATTCTGCAAATGCATCTTGTCAAAAAGCCTTTAATGCTTTGAGATTGATAGTAACGATAGGATGGGCAATTTAC VDWLITVPLQIVEFYLILAAITIVPAALFWRLLIYSLVMLVFGYLGEAGFMNVTLGFVIGMAGWLLILYEIFAGEASKINADSANASCQKAFNALRLIVTIGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGATTGG------------------------CTTATAACTGTTCCTTTGCAAATAGTTGAATTTTATTTAATCCTTGCGGCA---------ATA---ACGATTGTCCCTGCG---GCTCTA------------------------------------TTCTGGAGA---CTCCTAATCTATTCATTAGTAATGTTAGTTTTTGGGTATCTCGGAGAA---------GCT------------------GGC------TTT---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTCGGT---TTTGTTATAGGTATGGCTGGTTGGTTGCTCATCCTGTATGAAATA---------------TTT------GCA---GGAGAAGCAAGCAAGATTAATGCAGAT------TCT---GCAAATGCATCTTGT---CAA---AAA---GCC---TTT---AAT---GCTTTG---AGATTGATAGTAACGATA---------------------------------------------------------------GGATGG---------GCAATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPLQIVEFYLILAA---I-TIVPA-AL------------FWR-LLIYSLVMLVFGYLGE---A------G--F-----------M----------------------NV------TLG-FVIGMAGWLLILYEI-----F--A-GEASKINAD--S-ANASC-Q-K-A-F-N-AL-RLIVTI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ926141 [unk-env3-b] BOUM_OTU054_env_samples gb|KJ926141| Uncultured bacterium clone BOUM OTU054 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU054 putative proteorhodopsin gene, partial cds KJ926141 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 38.96217 14.32367 #na #na #na #na #na GTAGATTGGCTCATTACAGTGCCATTATTAATGATTGAATTCTTTATTATCCTCAAGGCTGTAGGTGCCGCAGTCTCCTCAAGTTCATTCTGGAGACTACTCATAGGTACCCTAGTCATGCTCATTGGTGGTTACCTCGGCGAAGCAGGCGTTATGTCAGCAAGCCTAGGATTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCTAGTAAAGCCGCAGAAGCTAATGCAGGTGTGAAAGCAGCTTTCAATGCGCTGAGACTTATCGTGCTCGTTGGATGGGCCATATAT VDWLITVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKAAFNALRLIVLVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGATTGG------------------------CTCATTACAGTGCCATTATTAATGATTGAATTCTTTATTATCCTCAAGGCT---------GTAGGTGCCGCAGTCTCCTCA---AGTTCA------------------------------------TTCTGGAGA---CTACTCATAGGTACCCTAGTCATGCTCATTGGTGGTTACCTCGGCGAA---------GCA------------------GGC------GTT---------------------------------ATG------------------------------------------------------------------TCAGCA------------------AGCCTAGGA---TTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCTAGTAAAGCCGCA------------GAA---GCTAATGCAGGTGTG---AAA---GCA---GCT---TTC---AAT---GCGCTG---AGACTTATCGTGCTCGTT---------------------------------------------------------------GGATGG---------GCCATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-A-A-F-N-AL-RLIVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env3-b]_DQ203623 [unk-env3-b] medHO120E10_env_samples_DQ203623 gi|77547694|gb|DQ203623| Uncultured bacterium clone medHO120E10 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120E10 predicted proteorhodopsin gene, partial cds DQ203623 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGGTACATTGACTGGCTCATTACAGTGCCATTATTAATGATTGAATTCTTTATTATCCTCAAGGCTGTAGGTGCTGCAGTTTCCTCAAGTTCATTCTGGAGACTACTCATAGGTACCCTAGTCATGCTCATTGGTGGTTACCTTGGCGAAGCAGGCGTTATGTCAGCAAGCCTAGGATTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCTAGTAAAGCCGCAGAAGCTAATGCTGGCGTGAAAGCAGCTTTCAATGCGCTGAGACTAATCGTGCTCGTTGGCTGGGCCATCTATCCA RYIDWLITVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKAAFNALRLIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATTGACTGG------------------------CTCATTACAGTGCCATTATTAATGATTGAATTCTTTATTATCCTCAAGGCT---------GTAGGTGCTGCAGTTTCCTCA---AGTTCA------------------------------------TTCTGGAGA---CTACTCATAGGTACCCTAGTCATGCTCATTGGTGGTTACCTTGGCGAA---------GCA------------------GGC------GTT---------------------------------ATG------------------------------------------------------------------TCAGCA------------------AGCCTAGGA---TTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCTAGTAAAGCCGCA------------GAA---GCTAATGCTGGCGTG---AAA---GCA---GCT---TTC---AAT---GCGCTG---AGACTAATCGTGCTCGTT---------------------------------------------------------------GGCTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-A-A-F-N-AL-RLIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env3-b]_DQ203554 [unk-env3-b] MedHO1202F4_env_samples_DQ203554 gi|77547556|gb|DQ203554| Uncultured bacterium clone MedHO1202F4 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202F4 predicted proteorhodopsin gene, partial cds DQ203554 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATATATTGATTGGCTAATTACAGTCCCATTATTAATGATTGAATTCTTTATTATTCTTAAGGCCGTAGGTGCTGCAGTCTCCTCAAGCTCGTTCTGGAGACTACTCATAGGTACCCTGGTCATGCTCATTGGTGGTTACCTTGGTGAAGCAGGCGTTATGTCAGCAAGCCTAGGATTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCAAGTAAAGCCGCAGAAGCTAATGCTGGTGTGAAAGCAGCTTTCAATGCGCTGAGACTTATCGTGCTCGTTGGCTGGGCAATCTATCCA RYIDWLITVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKAAFNALRLIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATATTGATTGG------------------------CTAATTACAGTCCCATTATTAATGATTGAATTCTTTATTATTCTTAAGGCC---------GTAGGTGCTGCAGTCTCCTCA---AGCTCG------------------------------------TTCTGGAGA---CTACTCATAGGTACCCTGGTCATGCTCATTGGTGGTTACCTTGGTGAA---------GCA------------------GGC------GTT---------------------------------ATG------------------------------------------------------------------TCAGCA------------------AGCCTAGGA---TTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCAAGTAAAGCCGCA------------GAA---GCTAATGCTGGTGTG---AAA---GCA---GCT---TTC---AAT---GCGCTG---AGACTTATCGTGCTCGTT---------------------------------------------------------------GGCTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-A-A-F-N-AL-RLIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env3-b]_FJ560832 [unk-env3-b] HEL117_env_samples_FJ560832 gi|223868811|gb|FJ560832| Uncultured microorganism clone HEL117 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL117 putative proteorhodopsin gene, partial cds FJ560832 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTGCCTCTGTTAATGATCGAATTCTTTATTATTCTCAAGGCCGTTGGTGCCGCAGTCTCCTCTAGTTCGTTCTGGAGACTACTCATAGGTACCCTAGTTATGCTTATTGGTGGTTACCTTGGTGAAGCAGGCATCATGTCAGCTAGCCTAGGATTCATTATTGGTATGATTGGTTGGGCTGTTATTATCTGGGAAATCTTTGGTGGAGAGGCAAGTAAAGCCGCAGAAGCCAATGCTGGAGTGCAACATTCTATCGTTCAACGCGCTCAG TVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGIMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVQHSIVQRAQ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTGCCTCTGTTAATGATCGAATTCTTTATTATTCTCAAGGCC---------GTTGGTGCCGCAGTCTCCTCT---AGTTCG------------------------------------TTCTGGAGA---CTACTCATAGGTACCCTAGTTATGCTTATTGGTGGTTACCTTGGTGAA---------GCA------------------GGC------ATC---------------------------------ATG------------------------------------------------------------------TCAGCT------------------AGCCTAGGA---TTCATTATTGGTATGATTGGTTGGGCTGTTATTATCTGGGAAATC---------------TTT------GGT---GGAGAGGCAAGTAAAGCCGCA------------GAA---GCCAATGCTGGAGTG---CAA---CAT---TCT---ATC---GTT---CAACGC---GCTCAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--I-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-Q-H-S-I-V-QR-AQ------------------------------------------------------------------------------------------------------------------------------------ [unk-env3-b]_FJ560834 [unk-env3-b] HEL120_env_samples_FJ560834 gi|223868815|gb|FJ560834| Uncultured microorganism clone HEL120 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL120 putative proteorhodopsin gene, partial cds FJ560834 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTGCCTCTGTTAATGATCGAATTCTTTATTATTCTCAAGGCCGTTGGTGCCGCAGTCTCCTCTAGTTCGTTCTGGAGACTACTCATAGGTACCCTAGTTATGCTTATTGGTGGTTACCTTGGTGAAGCAGGCATCATGTCAGCTAGCCTAGGATTCATTATTGGTATGATTGGTTGGGCTGTTATTATCTGGGAAATCTTTGGTGGAGAGGCAAGTAAAGCCGCAGAAGCCAATGCTGGAGTGAATAGCATCGTTCAACGCGCTCAG TVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGIMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVNSIVQRAQ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTGCCTCTGTTAATGATCGAATTCTTTATTATTCTCAAGGCC---------GTTGGTGCCGCAGTCTCCTCT---AGTTCG------------------------------------TTCTGGAGA---CTACTCATAGGTACCCTAGTTATGCTTATTGGTGGTTACCTTGGTGAA---------GCA------------------GGC------ATC---------------------------------ATG------------------------------------------------------------------TCAGCT------------------AGCCTAGGA---TTCATTATTGGTATGATTGGTTGGGCTGTTATTATCTGGGAAATC---------------TTT------GGT---GGAGAGGCAAGTAAAGCCGCA------------GAA---GCCAATGCTGGAGTG---AAT---AGC---ATC---GTT---CAA---CGCGCT---CAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--I-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-N-S-I-V-Q-RA-Q------------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_FJ560766 [unk-env3-b] HEL25_env_samples_FJ560766 gi|223868679|gb|FJ560766| Uncultured microorganism clone HEL25 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL25 putative proteorhodopsin gene, partial cds FJ560766 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTGCCTCTGTTAATGATCGAATTCTTTATTATTCTCAAGGCCGTTGGTGCCGCAGTCTCTTCTAGTTCGTTCTGGAGACTACTCATAGGTACCCTAGTTATGCTTATTGGTGGTTACCTTGGTGAAGCAGGCATCATGTCAGCTAGCCTAGGATTCATTATTGGTATGATTGGTTGGGCTGTTATTATCTGGGAAATCTTTGGTGGAGAGGCAAGTAAAGCCGCAGAAGCTAATGCTGGAGTGACAGCTCTA TVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGIMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVTAL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTGCCTCTGTTAATGATCGAATTCTTTATTATTCTCAAGGCC---------GTTGGTGCCGCAGTCTCTTCT---AGTTCG------------------------------------TTCTGGAGA---CTACTCATAGGTACCCTAGTTATGCTTATTGGTGGTTACCTTGGTGAA---------GCA------------------GGC------ATC---------------------------------ATG------------------------------------------------------------------TCAGCT------------------AGCCTAGGA---TTCATTATTGGTATGATTGGTTGGGCTGTTATTATCTGGGAAATC---------------TTT------GGT---GGAGAGGCAAGTAAAGCCGCA------------GAA---GCTAATGCTGGAGTG---ACA---GCT---CTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--I-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-T-A-L---------------------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_FJ560841 [unk-env3-b] HEL128_env_samples_FJ560841 gi|223868829|gb|FJ560841| Uncultured microorganism clone HEL128 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL128 putative proteorhodopsin gene, partial cds FJ560841 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTGCCTCTGTTAATGATCGAATTCTTTATTATTCTCAAGGCCGTTGGTGCCGCAGTCTCCTCTAGTTCGTTCTGGAGACTACTCATAGGTACCCTAGTTATGCTTATTGGTGGTTACCTTGGTGAAGCAGGCATCATGTCAGCTAGCCTAGGATTCATTATTGGTATGATTGGTTGGGCTGTTATTATCTGGGAAATCTTTGGTGGAGAGGCAAGTAAAGCCGCAGAAGCTAATGCTGGAGTGAAAGCAGCGTTTCAACGCGCTCGAGACTTATTG TVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGIMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKAAFQRARDLL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTGCCTCTGTTAATGATCGAATTCTTTATTATTCTCAAGGCC---------GTTGGTGCCGCAGTCTCCTCT---AGTTCG------------------------------------TTCTGGAGA---CTACTCATAGGTACCCTAGTTATGCTTATTGGTGGTTACCTTGGTGAA---------GCA------------------GGC------ATC---------------------------------ATG------------------------------------------------------------------TCAGCT------------------AGCCTAGGA---TTCATTATTGGTATGATTGGTTGGGCTGTTATTATCTGGGAAATC---------------TTT------GGT---GGAGAGGCAAGTAAAGCCGCA------------GAA---GCTAATGCTGGAGTG---AAA---GCA---GCG---TTT---CAA---CGCGCT---CGAGACTTATTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--I-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-A-A-F-Q-RA-RDLL---------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_DQ903175 [unk-env3-b] clone_HB10095_DQ903175 gi|116294079|gb|DQ903175| Uncultured bacterium clone HB10095 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone HB10095 putative proteorhodopsin gene, partial cds. DQ903175 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na East China Sea surface water (ECS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na ATGGTGGCCGCTACTGTTTTCTTCTTTTATGAAGGAATGGCAGTAAAAAAAGAGTGGAGACTTTCAATGACAGTTGCTGGACTAGTTACATTAGTTGCAGGTGTTCATTATCTCTACATGAGAGACTACTGGGTTGCTTCGCTCATCGCTGGTGAGGCTCAGTCTCCAATTGTCTACAGATACATTGATTGGTTAATTACAGTGCCTCTGTTAATGATCGAATTCTTTATTATTCTCAAGGCCGTTGGTGCCGCAGTCTCCTCTAGTTCGTTCTGGAGACTACTCATAGGTACCCTAGTTATGCTTATTGGTGGTTACCTTGGTGAAGCAGGCATCATGTCAGCTAGCCTAGGATTCATTATTGGTATGATTGGTTGGGCTGTTATTATCTGGGAAATCTTTGGTGGAGAGGCAAGTAAAGCCGCAGAAGCTAATGCTGGAGTGAAAGCAGCTTTCAACGCGCTCAGACTTATTGTGCTCGTTGGTTGGGCAATTTACCCA MVAATVFFFYEGMAVKKEWRLSMTVAGLVTLVAGVHYLYMRDYWVASLIAGEAQSPIVYRYIDWLITVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGIMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKAAFNALRLIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTTTTCTTCTTTTATGAAGGAATGGCAGTAAAAAAA---GAGTGGAGACTTTCAATGACAGTTGCTGGACTAGTTACATTAGTTGCAGGTGTTCATTATCTCTACATGAGAGACTACTGGGTT------------------------------------GCTTCGCTCATCGCTGGTGAGGCTCAGTCTCCAATTGTCTACAGATACATTGATTGG------------------------TTAATTACAGTGCCTCTGTTAATGATCGAATTCTTTATTATTCTCAAGGCC---------GTTGGTGCCGCAGTCTCCTCT---AGTTCG------------------------------------TTCTGGAGA---CTACTCATAGGTACCCTAGTTATGCTTATTGGTGGTTACCTTGGTGAA---------GCA------------------GGC------ATC---------------------------------ATG------------------------------------------------------------------TCAGCT------------------AGCCTAGGA---TTCATTATTGGTATGATTGGTTGGGCTGTTATTATCTGGGAAATC---------------TTT------GGT---GGAGAGGCAAGTAAAGCCGCA------------GAA---GCTAATGCTGGAGTG---AAA---GCA---GCT---TTC---AAC---GCGCTC---AGACTTATTGTGCTCGTT---------------------------------------------------------------GGTTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFYEGMAVKK-EWRLSMTVAGLVTLVAGVHYLYMRDYWV------------ASLIAGEAQSPIVYRYIDW--------LITVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--I-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-A-A-F-N-AL-RLIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env3-b]_EF079850 [unk-env3-b] clone_ID11029_EF079850 gi|126361789|gb|EF079850| Uncultured bacterium clone ID11029 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID11029 putative proteorhodopsin gene, partial cds. EF079850 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na #na Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGGTGGCCGCTACTGCGTTCTTCTTTTATGAGGGAATGGCAGTAAAAAAAGAGTGGAGACTTTCAATGACAGTTGCTGGACTAGTGACATTAGTTGCAGGTGTTCATTATCTCTACATGAGAGACTACTGGGTTGCTTCGCTCATCGCTGGTGAGGCTCAGTCTCCAATTGTCTACAGATACATTGATTGGTTAATTACAGTGCCTCTGTTAATGATCGAATTCTTTATTATTCTAAAGGCCGTTGGTGCCGCAGTCTCTTCTAGTTCGTTCTGGAGACTACTCATAGGTACCCTAGTTATGCTTATTGGTGGCTACCTTGGTGAAGCAGGCGTCATGTCAGCTAGCCTAGGATTCATTATTGGTATGATTGGTTGGGCTGTTATTATCTGGGAAATCTTTGGTGGAGAGGCAAGTAAAGCTGCAGAAGCTAATGCTGGAGTGAAAGCAGCTTTCAACGCGCTCAGACTTATTGTGCTCGTTGGTTGGGCCATTTATCCA MVAATAFFFYEGMAVKKEWRLSMTVAGLVTLVAGVHYLYMRDYWVASLIAGEAQSPIVYRYIDWLITVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKAAFNALRLIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCGTTCTTCTTTTATGAGGGAATGGCAGTAAAAAAA---GAGTGGAGACTTTCAATGACAGTTGCTGGACTAGTGACATTAGTTGCAGGTGTTCATTATCTCTACATGAGAGACTACTGGGTT------------------------------------GCTTCGCTCATCGCTGGTGAGGCTCAGTCTCCAATTGTCTACAGATACATTGATTGG------------------------TTAATTACAGTGCCTCTGTTAATGATCGAATTCTTTATTATTCTAAAGGCC---------GTTGGTGCCGCAGTCTCTTCT---AGTTCG------------------------------------TTCTGGAGA---CTACTCATAGGTACCCTAGTTATGCTTATTGGTGGCTACCTTGGTGAA---------GCA------------------GGC------GTC---------------------------------ATG------------------------------------------------------------------TCAGCT------------------AGCCTAGGA---TTCATTATTGGTATGATTGGTTGGGCTGTTATTATCTGGGAAATC---------------TTT------GGT---GGAGAGGCAAGTAAAGCTGCA------------GAA---GCTAATGCTGGAGTG---AAA---GCA---GCT---TTC---AAC---GCGCTC---AGACTTATTGTGCTCGTT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFYEGMAVKK-EWRLSMTVAGLVTLVAGVHYLYMRDYWV------------ASLIAGEAQSPIVYRYIDW--------LITVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-A-A-F-N-AL-RLIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ926173 [unk-env3-b] RHOMEO_AG_OTU13_u2 gb|KJ926173| Uncultured bacterium cloneRHOMEO AG OTU13 u2 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU13 u2 putative proteorhodopsin gene, partial cds KJ926173 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGTTGATTACAGTGCCTCTATTGATGATTGAATTCTTTATTATTCTTAAGGCGGTTGGTGCCGCAGTCTCTTCAAGTTCATTCTGGAGACTACTCATAGGTACCTTAGTTATGCTAATTGGTGGCTACCTTGGTGAAGCAGGCGTTATGTCGGCTAGCCTAGGATTCATTATAGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCAAGTAAAGCCGCAGAAGCTAATGCAGGTGTAAAAGCAGCTTTCAATGCGCTTAGACTAATCGTCCTCGTT WLITVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKAAFNALRLIVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGATTACAGTGCCTCTATTGATGATTGAATTCTTTATTATTCTTAAGGCG---------GTTGGTGCCGCAGTCTCTTCA---AGTTCA------------------------------------TTCTGGAGA---CTACTCATAGGTACCTTAGTTATGCTAATTGGTGGCTACCTTGGTGAA---------GCA------------------GGC------GTT---------------------------------ATG------------------------------------------------------------------TCGGCT------------------AGCCTAGGA---TTCATTATAGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCAAGTAAAGCCGCA------------GAA---GCTAATGCAGGTGTA---AAA---GCA---GCT---TTC---AAT---GCGCTT---AGACTAATCGTCCTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-A-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ926172 [unk-env3-b] RHOMEO_AG_OTU13 gb|KJ926172| Uncultured bacterium cloneRHOMEO AG OTU13 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU13 putative proteorhodopsin gene, partial cds KJ926172 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGTTAATTACAGTGCCTCTATTGATGATTGAATTCTTTATTATTCTTAAGGCCGTTGGTGCCGCAGTCTCTTCAAGTTCACTCTGGAGACTACTCATAGGTACCTTAGTTATGCTAATTGGTGGTTACCTTGGTGAAGCAGGCGTCATGTCAGCTAGCCTAGGATTCATTATAGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCAAGTAAAGCCGCAGAAGCTAATGCAGGTGTAAAAGCAGCTTTCAATGCGCTTAGACTAATCGTCCTCGTT WLITVPLLMIEFFIILKAVGAAVSSSSLWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKAAFNALRLIVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTAATTACAGTGCCTCTATTGATGATTGAATTCTTTATTATTCTTAAGGCC---------GTTGGTGCCGCAGTCTCTTCA---AGTTCA------------------------------------CTCTGGAGA---CTACTCATAGGTACCTTAGTTATGCTAATTGGTGGTTACCTTGGTGAA---------GCA------------------GGC------GTC---------------------------------ATG------------------------------------------------------------------TCAGCT------------------AGCCTAGGA---TTCATTATAGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCAAGTAAAGCCGCA------------GAA---GCTAATGCAGGTGTA---AAA---GCA---GCT---TTC---AAT---GCGCTT---AGACTAATCGTCCTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFFIILKA---VGAAVSS-SS------------LWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-A-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_1105108367236 [unk-env3-b] JCVI_ORF_1105108367236 jcvi|1105108367236| 1105108367236 JCVI ORF 1105108367236 1105108367236 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 19-DEC-2003 Coastal/3m_depth/S_n.a/GS013/Off_Nags_Head/NC/North_American_East_Coast Atlantic Ocean marine 36.003887 -75.39472 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf CGGGCCTTGGCAGAATACTGGGTTGCTTCGCTTATCGCTGGTGAAGCTCAATCTCCAATTGTCTACAGATACATTGATTGGTTAATTACAGTGCCTCTATTGATGATTGAATTCTTTATTATTCTTAAGGCCGTTGGTGCTGCAGTCTCTTCGAGTTCATTTTGGAGACTACTCATAGGTACCTTAGTTATGCTAATTGGTGGTTACCTTGGTGAAGCAGGCGTTATGTCGGCAAGCCTAGGATTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCAAGTAAAGCCGCAGAAGCTAATGCAGGTGTAAAATCAGCTTTCAATGCTCTTAGATTAATCGTCCTCGTTGGCTGGGCAATCTATCCACTAGGATATATTTTCGGCTACATGATGGGCTCTGTAGACAACGGTACTCTGAATATCGTATATAACCTTGCAGATTTTGTTAACAAAATCTTATTTGGTTTGATCATTTGGAATGTTGCTGTTAAAGAATCAGAAGCC RALAEYWVASLIAGEAQSPIVYRYIDWLITVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKSAFNALRLIVLVGWAIYPLGYIFGYMMGSVDNGTLNIVYNLADFVNKILFGLIIWNVAVKESEA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGGCCTTGGCAGAATACTGGGTT------------------------------------GCTTCGCTTATCGCTGGTGAAGCTCAATCTCCAATTGTCTACAGATACATTGATTGG------------------------TTAATTACAGTGCCTCTATTGATGATTGAATTCTTTATTATTCTTAAGGCC---------GTTGGTGCTGCAGTCTCTTCG---AGTTCA------------------------------------TTTTGGAGA---CTACTCATAGGTACCTTAGTTATGCTAATTGGTGGTTACCTTGGTGAA---------GCA------------------GGC------GTT---------------------------------ATG------------------------------------------------------------------TCGGCA------------------AGCCTAGGA---TTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCAAGTAAAGCCGCA------------GAA---GCTAATGCAGGTGTA---AAA---TCA---GCT---TTC---AAT---GCTCTT---AGATTAATCGTCCTCGTT---------------------------------------------------------------GGCTGG---------GCAATCTATCCACTAGGATATATTTTCGGCTACATG---------------------------------------ATGGGCTCTGTAGACAACGGTACTCTGAATATCGTATATAACCTTGCAGATTTTGTTAACAAAATCTTATTTGGTTTGATCATTTGGAATGTTGCTGTTAAAGAATCAGAAGCC--------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RALAEYWV------------ASLIAGEAQSPIVYRYIDW--------LITVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-S-A-F-N-AL-RLIVLV---------------------GW---AIYPLGYIFGYM-------------MGSVDNGTLNIVYNLADFVNKILFGLIIWNVAVKESEA--------------------------------------- [unk-env3-b]_FJ560755 [unk-env3-b] HEL7_env_samples_FJ560755 gi|223868657|gb|FJ560755| Uncultured microorganism clone HEL7 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL7 putative proteorhodopsin gene, partial cds FJ560755 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTGCCTCTATTGATGATTGAATTCTTTATTATTCTTAAGGCCGTTGGTGCCGCAGTCTCTTCAAGTTCATTTTGGAGACTACTCATAGGTACCTTAGTTATGCTAATTGGTGGTTACCTTGGTGAAGCTGGTGTTATGTCGGCAAGCCTAGGATTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCAAGTAAAGCCGCAGAAGCAAATGCAGGTGTAAAATCAGCTTTCAATGCTCTTAGATTA TVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKSAFNALRL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTGCCTCTATTGATGATTGAATTCTTTATTATTCTTAAGGCC---------GTTGGTGCCGCAGTCTCTTCA---AGTTCA------------------------------------TTTTGGAGA---CTACTCATAGGTACCTTAGTTATGCTAATTGGTGGTTACCTTGGTGAA---------GCT------------------GGT------GTT---------------------------------ATG------------------------------------------------------------------TCGGCA------------------AGCCTAGGA---TTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCAAGTAAAGCCGCA------------GAA---GCAAATGCAGGTGTA---AAA---TCA---GCT---TTC---AAT---GCTCTT---AGATTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-S-A-F-N-AL-RL------------------------------------------------------------------------------------------------------------------------------------ [unk-env3-b]_FJ560764 [unk-env3-b] HEL19_env_samples_FJ560764 gi|223868675|gb|FJ560764| Uncultured microorganism clone HEL19 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL19 putative proteorhodopsin gene, partial cds FJ560764 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTGCCTCTATTGATGATTGAATTCTTTATTATTCTTAAGGCCGTTGGTGCCGCAGTCTCTTCAAGTTCATTTTGGAGACTACTCATAGGTACCTTAGTTATGCTAATTGGTGGTTACCTTGGTGAAGCTGGTGTTATGTCGGCAAGCCTAGGATTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCAAGTAAAGCCGCAGAAGCAAATGCAGGTGTAAAATCAGCTTTCAATGCTCTTAGATTA TVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKSAFNALRL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTGCCTCTATTGATGATTGAATTCTTTATTATTCTTAAGGCC---------GTTGGTGCCGCAGTCTCTTCA---AGTTCA------------------------------------TTTTGGAGA---CTACTCATAGGTACCTTAGTTATGCTAATTGGTGGTTACCTTGGTGAA---------GCT------------------GGT------GTT---------------------------------ATG------------------------------------------------------------------TCGGCA------------------AGCCTAGGA---TTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCAAGTAAAGCCGCA------------GAA---GCAAATGCAGGTGTA---AAA---TCA---GCT---TTC---AAT---GCTCTT---AGATTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-S-A-F-N-AL-RL------------------------------------------------------------------------------------------------------------------------------------ [unk-env3-b]_FJ560859 [unk-env3-b] HEL149_env_samples_FJ560859 gi|223868865|gb|FJ560859| Uncultured microorganism clone HEL149 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL149 putative proteorhodopsin gene, partial cds FJ560859 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTGCCTCTATTGATGATTGAATTCTTTATTATTCTTAAGGCCGTTGGTGCCGCAGTCTCTTCAAGTTCATTTTGGAGACTACTCATAGGTACCTTAGTTATGCTAATTGGTGGTTACCTTGGTGAAGCTGGTGTTATGTCGGCAAGCCTAGGATTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCAAGTAAAGCCGCAGAAGCAAATGCAGGTGTAAAATCAGCTTTCAATGCTCTTAGATTA TVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKSAFNALRL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTGCCTCTATTGATGATTGAATTCTTTATTATTCTTAAGGCC---------GTTGGTGCCGCAGTCTCTTCA---AGTTCA------------------------------------TTTTGGAGA---CTACTCATAGGTACCTTAGTTATGCTAATTGGTGGTTACCTTGGTGAA---------GCT------------------GGT------GTT---------------------------------ATG------------------------------------------------------------------TCGGCA------------------AGCCTAGGA---TTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCAAGTAAAGCCGCA------------GAA---GCAAATGCAGGTGTA---AAA---TCA---GCT---TTC---AAT---GCTCTT---AGATTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-S-A-F-N-AL-RL------------------------------------------------------------------------------------------------------------------------------------ [unk-env3-b]_FJ560756 [unk-env3-b] HEL9_env_samples_FJ560756 gi|223868659|gb|FJ560756| Uncultured microorganism clone HEL9 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL9 putative proteorhodopsin gene, partial cds FJ560756 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTGCCTCTATTGATGATTGAATTCTTTATTATTCTTAAGGCCGTTGGTGCCGCAGTCTCTTCAAGTTCATTTTGGAGACTACTCATAGGTACCTTAGTTATGCTAATTGGTGGTTACCTTGGTGAAGCTGGTGTTATGTCGGCAAGCCTAGGATTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCAAGTAAAGCCGCAGAAGCAAATGCAGGTGTAAAATCTAGCATTGTCAATGCTCTTAGATTA TVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKSSIVNALRL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTGCCTCTATTGATGATTGAATTCTTTATTATTCTTAAGGCC---------GTTGGTGCCGCAGTCTCTTCA---AGTTCA------------------------------------TTTTGGAGA---CTACTCATAGGTACCTTAGTTATGCTAATTGGTGGTTACCTTGGTGAA---------GCT------------------GGT------GTT---------------------------------ATG------------------------------------------------------------------TCGGCA------------------AGCCTAGGA---TTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCAAGTAAAGCCGCA------------GAA---GCAAATGCAGGTGTA---AAA---TCT---AGC---ATTGTCAAT---GCTCTT---AGATTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-S-S-IVN-AL-RL------------------------------------------------------------------------------------------------------------------------------------ [unk-env3-b]_FJ560840 [unk-env3-b] HEL127_env_samples_FJ560840 gi|223868827|gb|FJ560840| Uncultured microorganism clone HEL127 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL127 putative proteorhodopsin gene, partial cds FJ560840 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTGCCTCTATTGATGATTGAATTCTTTATTATTCTTAAGGCCGTTGGTGCCGCAGTCTCTTCAAGTTCATTTTGGAGACTACTCATAGGTACCTTAGTTATGCTAATTGGTGGTTACCTTGGTGAAGCTGGCGTTATGTCGGCAAGCCTAGGATTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCAAGTAAAGCCGCAGAAGCAAATGCAGGTGTAAAATCAGCGTTTCAATGCTCT TVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKSAFQCS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTGCCTCTATTGATGATTGAATTCTTTATTATTCTTAAGGCC---------GTTGGTGCCGCAGTCTCTTCA---AGTTCA------------------------------------TTTTGGAGA---CTACTCATAGGTACCTTAGTTATGCTAATTGGTGGTTACCTTGGTGAA---------GCT------------------GGC------GTT---------------------------------ATG------------------------------------------------------------------TCGGCA------------------AGCCTAGGA---TTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCAAGTAAAGCCGCA------------GAA---GCAAATGCAGGTGTA---AAA---TCA---GCG---TTT---CAA---TGCTCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-S-A-F-Q-CS--------------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_FJ560843 [unk-env3-b] HEL130_env_samples_FJ560843 gi|223868833|gb|FJ560843| Uncultured microorganism clone HEL130 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL130 putative proteorhodopsin gene, partial cds FJ560843 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTGCCTCTATTGATGATTGAATTCTTTATTATTCTTAAGGCCGTTGGTGCCGCAGTCTCTTCAAGTTCATTTTGGAGACTACTCATAGGTACCTTAGTTATGCTAATTGGTGGTTACCTTGGTGAAGCTGGTGTTATGTCGGCAAGCCTAGGATTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCAAGTAAAGCCGCAGAAGCAAATGCAGGTGTAAAATCAGCGTTTCAATGCTCT TVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKSAFQCS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTGCCTCTATTGATGATTGAATTCTTTATTATTCTTAAGGCC---------GTTGGTGCCGCAGTCTCTTCA---AGTTCA------------------------------------TTTTGGAGA---CTACTCATAGGTACCTTAGTTATGCTAATTGGTGGTTACCTTGGTGAA---------GCT------------------GGT------GTT---------------------------------ATG------------------------------------------------------------------TCGGCA------------------AGCCTAGGA---TTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCAAGTAAAGCCGCA------------GAA---GCAAATGCAGGTGTA---AAA---TCA---GCG---TTT---CAA---TGCTCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-S-A-F-Q-CS--------------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_FJ560835 [unk-env3-b] HEL121_env_samples_FJ560835 gi|223868817|gb|FJ560835| Uncultured microorganism clone HEL121 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL121 putative proteorhodopsin gene, partial cds FJ560835 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTGCCTCTATTGATGATTGAATTCTTTATTATTCTTAAGGCCGTTGGTGCCGCAGTCTCTTCAAGTTCATTTTGGAGACTACTCATAGGTACCTTAGTTATGCTAATTGGTGGTTACCTTGGTGAAGCTGGTGTTATGTCGGCAAGCCTAGGATTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCAAGTAAAGCCGCAGAAGCAAATGCAGGTGTAAAATCAGCGTTTCAATGCTCT TVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKSAFQCS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTGCCTCTATTGATGATTGAATTCTTTATTATTCTTAAGGCC---------GTTGGTGCCGCAGTCTCTTCA---AGTTCA------------------------------------TTTTGGAGA---CTACTCATAGGTACCTTAGTTATGCTAATTGGTGGTTACCTTGGTGAA---------GCT------------------GGT------GTT---------------------------------ATG------------------------------------------------------------------TCGGCA------------------AGCCTAGGA---TTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCAAGTAAAGCCGCA------------GAA---GCAAATGCAGGTGTA---AAA---TCA---GCG---TTT---CAA---TGCTCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-S-A-F-Q-CS--------------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_FJ560751 [unk-env3-b] HEL1_env_samples_FJ560751 gi|223868649|gb|FJ560751| Uncultured microorganism clone HEL1 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL1 putative proteorhodopsin gene, partial cds FJ560751 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTGCCTCTATTGATGATTGAATTCTTTATTATTCTTAAGGCCGTTGGTGCCGCAGTCTCTTCAAGTTCATTTTGGAGACTACTCATAGGTACCTTAGTTATGCTAATTGGTGGTTACCTTGGTGAAGCTGGTGTTATGTCGGCAAGCCTAGGATTCATTATCGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCAAGTAAAGCCGCAGAAGCAAATGCAGGTGTAAAATCAGCTTGTCAATGCTCT TVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKSACQCS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTGCCTCTATTGATGATTGAATTCTTTATTATTCTTAAGGCC---------GTTGGTGCCGCAGTCTCTTCA---AGTTCA------------------------------------TTTTGGAGA---CTACTCATAGGTACCTTAGTTATGCTAATTGGTGGTTACCTTGGTGAA---------GCT------------------GGT------GTT---------------------------------ATG------------------------------------------------------------------TCGGCA------------------AGCCTAGGA---TTCATTATCGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCAAGTAAAGCCGCA------------GAA---GCAAATGCAGGTGTA---AAA---TCA---GCT---TGT---CAA---TGCTCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-S-A-C-Q-CS--------------------------------------------------------------------------------------------------------------------------------------- [unk-env3-a]_DQ203500 [unk-env3-a] MedHO1202A7_env_samples_DQ203500 gi|77547448|gb|DQ203500| Uncultured bacterium clone MedHO1202A7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202A7 predicted proteorhodopsin gene, partial cds DQ203500 [[root proteorhodopsin/env cluster 3/A subcluster]] root proteorhodopsin env cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATTACTGTTCCTCTATTGATGATCGAGTTTTATATAATATTGAAAGCAGTTGGTGCTTCGGTGTCAGCTAATTCATTTTGGAGATTGTTAATTGGTACTCTAGTTATGCTAATTGGTGGTTATCTTGGTGAAACTGGATTGTATGGTGTCGGTGCTACTTTTGGCTTCATTATCGGTATGATTGGTTGGGCTGTTATTATTTGGGAAATCTTCAGAGGTGAAGCAAGTCAAGCTGCTGATGGAAAAGAAGGTATAAAATCAGCTTTTAATGCACTAAGAATCATTGTTCTTGTTGGTTGGGCGATATACCCA RYIDWLITVPLLMIEFYIILKAVGASVSANSFWRLLIGTLVMLIGGYLGETGLYGVGATFGFIIGMIGWAVIIWEIFRGEASQAADGKEGIKSAFNALRIIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATTACTGTTCCTCTATTGATGATCGAGTTTTATATAATATTGAAAGCA---------GTTGGTGCTTCGGTGTCAGCT---AATTCA------------------------------------TTTTGGAGA---TTGTTAATTGGTACTCTAGTTATGCTAATTGGTGGTTATCTTGGTGAA---------ACT------------------GGA------TTGTATGGT---------------------------GTC------------------------------------------------------------------GGTGCT------------------ACTTTTGGC---TTCATTATCGGTATGATTGGTTGGGCTGTTATTATTTGGGAAATC---------------TTC------AGA---GGTGAAGCAAGTCAAGCTGCT------------GAT---GGAAAAGAAGGTATA---AAA---TCA---GCT---TTT---AAT---GCACTA---AGAATCATTGTTCTTGTT---------------------------------------------------------------GGTTGG---------GCGATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMIEFYIILKA---VGASVSA-NS------------FWR-LLIGTLVMLIGGYLGE---T------G--LYG---------V----------------------GA------TFG-FIIGMIGWAVIIWEI-----F--R-GEASQAA----D-GKEGI-K-S-A-F-N-AL-RIIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env3-a]_DQ203501 [unk-env3-a] MedHO1202A8_env_samples_DQ203501 gi|77547450|gb|DQ203501| Uncultured bacterium clone MedHO1202A8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202A8 predicted proteorhodopsin gene, partial cds DQ203501 [[root proteorhodopsin/env cluster 3/A subcluster]] root proteorhodopsin env cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATTACTGTTCCTCTATTGATGATCGAGTTTTATATAATATTGAAAGCAGTTGGTGCTTCGGTGTCAGCTAATTCATTTTGGAGATTGTTAATTGGTACTCTAGTTATGCTAATTGGTGGTTATCTTGGTGAAACTGGATTGTATGGTGTCGGTGCTACTTTTGGCTTCATTATCGGTATGATTGGTTGGGCTGTTATTATTTGGGAAATCTTCAGAGGTGAAGCAAGTCAAGCTGCTGATGGAAAAGAAGGTATAAAATCAGCTTTTAATGCACTAAGAATCATTGTTCTTGTTGGTTGGGCGATATACCCA RYIDWLITVPLLMIEFYIILKAVGASVSANSFWRLLIGTLVMLIGGYLGETGLYGVGATFGFIIGMIGWAVIIWEIFRGEASQAADGKEGIKSAFNALRIIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATTACTGTTCCTCTATTGATGATCGAGTTTTATATAATATTGAAAGCA---------GTTGGTGCTTCGGTGTCAGCT---AATTCA------------------------------------TTTTGGAGA---TTGTTAATTGGTACTCTAGTTATGCTAATTGGTGGTTATCTTGGTGAA---------ACT------------------GGA------TTGTATGGT---------------------------GTC------------------------------------------------------------------GGTGCT------------------ACTTTTGGC---TTCATTATCGGTATGATTGGTTGGGCTGTTATTATTTGGGAAATC---------------TTC------AGA---GGTGAAGCAAGTCAAGCTGCT------------GAT---GGAAAAGAAGGTATA---AAA---TCA---GCT---TTT---AAT---GCACTA---AGAATCATTGTTCTTGTT---------------------------------------------------------------GGTTGG---------GCGATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMIEFYIILKA---VGASVSA-NS------------FWR-LLIGTLVMLIGGYLGE---T------G--LYG---------V----------------------GA------TFG-FIIGMIGWAVIIWEI-----F--R-GEASQAA----D-GKEGI-K-S-A-F-N-AL-RIIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env3-a]_DQ203536 [unk-env3-a] MedHO1202D9_env_samples_DQ203536 gi|77547520|gb|DQ203536| Uncultured bacterium clone MedHO1202D9 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202D9 predicted proteorhodopsin gene, partial cds DQ203536 [[root proteorhodopsin/env cluster 3/A subcluster]] root proteorhodopsin env cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATTACTGTTCCTCTATTGATGATCGAGTTTTATATAATATTGAAAGCAGTTGGTGCTTCGGTGTCAGCTAATTCATTTTGGAGATTGTTAATTGGTACTCTAGTTATGCTAATTGGTGGTTATCTTGGTGAAACTGGATTGTATGGTGTCGGTGCTACTTTTGGCTTCATTATCGGTATGATTGGTTGGGCTGTTATTATTTGGGAAATCTTCAGAGGTGAAGCAAGTCAAGCTGCTGATGGAAAAGAAGGTATAAAATCAGCTTTTAATGCACTAAGAATCATTGTTCTTGTTGGTTGGGCAATTTACCCA RYIDWLITVPLLMIEFYIILKAVGASVSANSFWRLLIGTLVMLIGGYLGETGLYGVGATFGFIIGMIGWAVIIWEIFRGEASQAADGKEGIKSAFNALRIIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATTACTGTTCCTCTATTGATGATCGAGTTTTATATAATATTGAAAGCA---------GTTGGTGCTTCGGTGTCAGCT---AATTCA------------------------------------TTTTGGAGA---TTGTTAATTGGTACTCTAGTTATGCTAATTGGTGGTTATCTTGGTGAA---------ACT------------------GGA------TTGTATGGT---------------------------GTC------------------------------------------------------------------GGTGCT------------------ACTTTTGGC---TTCATTATCGGTATGATTGGTTGGGCTGTTATTATTTGGGAAATC---------------TTC------AGA---GGTGAAGCAAGTCAAGCTGCT------------GAT---GGAAAAGAAGGTATA---AAA---TCA---GCT---TTT---AAT---GCACTA---AGAATCATTGTTCTTGTT---------------------------------------------------------------GGTTGG---------GCAATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMIEFYIILKA---VGASVSA-NS------------FWR-LLIGTLVMLIGGYLGE---T------G--LYG---------V----------------------GA------TFG-FIIGMIGWAVIIWEI-----F--R-GEASQAA----D-GKEGI-K-S-A-F-N-AL-RIIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env3-a]_DQ203517 [unk-env3-a] MedHO1202C11_env_samples_DQ203517 gi|77547482|gb|DQ203517| Uncultured bacterium clone MedHO1202C11 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202C11 predicted proteorhodopsin gene, partial cds DQ203517 [[root proteorhodopsin/env cluster 3/A subcluster]] root proteorhodopsin env cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATTACTGTTCCTCTATTGATGATCGAGTTTTATATAATATTGAAAGCAGTTGGTGCTTCGGTGTCAGCTAATTCATTTTGGAGATTGTTAATTGGTACTCTAGTTATGCTAATTGGTGGTTATCTTGGTGAAACTGGATTGTATGGTGTCGGTGCTACTTTTGGCTTCATTATCGGTATGATTGGTTGGGCTGTTATTATTTGGGAAATCTTCAGAGGTGAAGCAAGTCAAGCTGCTGATGGAAAAGAAGGTATAAAATCAGCTTTTAATGCACTAAGAATCATTGTTCTTGTTGGTTGGGCGATTTATCCA RYIDWLITVPLLMIEFYIILKAVGASVSANSFWRLLIGTLVMLIGGYLGETGLYGVGATFGFIIGMIGWAVIIWEIFRGEASQAADGKEGIKSAFNALRIIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATTACTGTTCCTCTATTGATGATCGAGTTTTATATAATATTGAAAGCA---------GTTGGTGCTTCGGTGTCAGCT---AATTCA------------------------------------TTTTGGAGA---TTGTTAATTGGTACTCTAGTTATGCTAATTGGTGGTTATCTTGGTGAA---------ACT------------------GGA------TTGTATGGT---------------------------GTC------------------------------------------------------------------GGTGCT------------------ACTTTTGGC---TTCATTATCGGTATGATTGGTTGGGCTGTTATTATTTGGGAAATC---------------TTC------AGA---GGTGAAGCAAGTCAAGCTGCT------------GAT---GGAAAAGAAGGTATA---AAA---TCA---GCT---TTT---AAT---GCACTA---AGAATCATTGTTCTTGTT---------------------------------------------------------------GGTTGG---------GCGATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMIEFYIILKA---VGASVSA-NS------------FWR-LLIGTLVMLIGGYLGE---T------G--LYG---------V----------------------GA------TFG-FIIGMIGWAVIIWEI-----F--R-GEASQAA----D-GKEGI-K-S-A-F-N-AL-RIIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env3-a]_DQ203409 [unk-env3-a] MedHO102G1_env_samples_DQ203409 gi|77547266|gb|DQ203409| Uncultured bacterium clone MedHO102G1 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102G1 predicted proteorhodopsin gene, partial cds DQ203409 [[root proteorhodopsin/env cluster 3/A subcluster]] root proteorhodopsin env cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATACATTGATTGGCTAATTACTGTTCCTCTATTGATGATCGAGTTTTATATAATATTGAAAGCAGTTGGCGCTTCGGTGTCAGCTAATTCATTTTGGAGATTGTTAATTGGTACTCTAGTTATGCTAATTGGTGGTTATCTTGGTGAAACTGGATTGTATGGTGTCGGTGCTACTTTTGGCTTCATTATCGGTATGATTGGTTGGGCTGTTATTATTTGGGAAATCTTCAGAGGTGAAGCAAGTCAAGCTGCTGATGGAAAAGAAGGTATAAAATCAGCTTTTAATGCACTAAGAATCATTGTTCTTGTTGGTTGGGCCATTTATCCA RYIDWLITVPLLMIEFYIILKAVGASVSANSFWRLLIGTLVMLIGGYLGETGLYGVGATFGFIIGMIGWAVIIWEIFRGEASQAADGKEGIKSAFNALRIIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATTGATTGG------------------------CTAATTACTGTTCCTCTATTGATGATCGAGTTTTATATAATATTGAAAGCA---------GTTGGCGCTTCGGTGTCAGCT---AATTCA------------------------------------TTTTGGAGA---TTGTTAATTGGTACTCTAGTTATGCTAATTGGTGGTTATCTTGGTGAA---------ACT------------------GGA------TTGTATGGT---------------------------GTC------------------------------------------------------------------GGTGCT------------------ACTTTTGGC---TTCATTATCGGTATGATTGGTTGGGCTGTTATTATTTGGGAAATC---------------TTC------AGA---GGTGAAGCAAGTCAAGCTGCT------------GAT---GGAAAAGAAGGTATA---AAA---TCA---GCT---TTT---AAT---GCACTA---AGAATCATTGTTCTTGTT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMIEFYIILKA---VGASVSA-NS------------FWR-LLIGTLVMLIGGYLGE---T------G--LYG---------V----------------------GA------TFG-FIIGMIGWAVIIWEI-----F--R-GEASQAA----D-GKEGI-K-S-A-F-N-AL-RIIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env3-a]_DQ203572 [unk-env3-a] MedHO1202H11_env_samples_DQ203572 gi|77547592|gb|DQ203572| Uncultured bacterium clone MedHO1202H11 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202H11 predicted proteorhodopsin gene, partial cds DQ203572 [[root proteorhodopsin/env cluster 3/A subcluster]] root proteorhodopsin env cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGTTAATTACTGTTCCTCTATTGATGATCGAGTTTTATATAATATTGAAAGCAGTTGGTGCTTCGGTGTCAGCTAATTCATTTTGGAGATTGTTAATTGGTACTCTAGTTATGCTAATTGGTGGTTATCTTGGTGAAACTGGATTGTATGGTGTCGGTGCTACTTTTGGCTTCATTATCGGTATGATTGGTTGGGCTGTTATTATTTGGGAAATCTTCAGAGGTGAAGCAAGTCAAGCTGCTGATGGAAAAGAAGGTATAAAATCAGCTTTTAATGCACTAAGAATCATTGTTCTTGTTGGGTGGGCTATTTATCCA RYIDWLITVPLLMIEFYIILKAVGASVSANSFWRLLIGTLVMLIGGYLGETGLYGVGATFGFIIGMIGWAVIIWEIFRGEASQAADGKEGIKSAFNALRIIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------TTAATTACTGTTCCTCTATTGATGATCGAGTTTTATATAATATTGAAAGCA---------GTTGGTGCTTCGGTGTCAGCT---AATTCA------------------------------------TTTTGGAGA---TTGTTAATTGGTACTCTAGTTATGCTAATTGGTGGTTATCTTGGTGAA---------ACT------------------GGA------TTGTATGGT---------------------------GTC------------------------------------------------------------------GGTGCT------------------ACTTTTGGC---TTCATTATCGGTATGATTGGTTGGGCTGTTATTATTTGGGAAATC---------------TTC------AGA---GGTGAAGCAAGTCAAGCTGCT------------GAT---GGAAAAGAAGGTATA---AAA---TCA---GCT---TTT---AAT---GCACTA---AGAATCATTGTTCTTGTT---------------------------------------------------------------GGGTGG---------GCTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMIEFYIILKA---VGASVSA-NS------------FWR-LLIGTLVMLIGGYLGE---T------G--LYG---------V----------------------GA------TFG-FIIGMIGWAVIIWEI-----F--R-GEASQAA----D-GKEGI-K-S-A-F-N-AL-RIIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env3-a]_DQ203643 [unk-env3-a] medHO120G11_env_samples_DQ203643 gi|77547734|gb|DQ203643| Uncultured bacterium clone medHO120G11 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120G11 predicted proteorhodopsin gene, partial cds DQ203643 [[root proteorhodopsin/env cluster 3/A subcluster]] root proteorhodopsin env cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATTACTGTTCCTCTATTGATGATCGAGTTTTATATAATATTGAAAGCAGTTGGTGCTTCGGTGTCAGCTAATTCATTTTGGAGATTGTTAATTGGTACTCTAGTTATGCTAATTGGTGGTTATCTTGGTGAAACTGGATTGTATGGTGTCGGTGCTACTTTTGGCTTCATTATCGGTATGATTGGTTGGGCTGTTATTATTTGGGAAATCTTCAGAGGTGAAGCAAGTCAAGCTGCTGATGGAAAAGAAGGTATAAAATCAGCTTTTAATGCACTAAGAATCATTGTTCTTGTTGGTTGGGCCATTTATCCA RYIDWLITVPLLMIEFYIILKAVGASVSANSFWRLLIGTLVMLIGGYLGETGLYGVGATFGFIIGMIGWAVIIWEIFRGEASQAADGKEGIKSAFNALRIIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATTACTGTTCCTCTATTGATGATCGAGTTTTATATAATATTGAAAGCA---------GTTGGTGCTTCGGTGTCAGCT---AATTCA------------------------------------TTTTGGAGA---TTGTTAATTGGTACTCTAGTTATGCTAATTGGTGGTTATCTTGGTGAA---------ACT------------------GGA------TTGTATGGT---------------------------GTC------------------------------------------------------------------GGTGCT------------------ACTTTTGGC---TTCATTATCGGTATGATTGGTTGGGCTGTTATTATTTGGGAAATC---------------TTC------AGA---GGTGAAGCAAGTCAAGCTGCT------------GAT---GGAAAAGAAGGTATA---AAA---TCA---GCT---TTT---AAT---GCACTA---AGAATCATTGTTCTTGTT---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMIEFYIILKA---VGASVSA-NS------------FWR-LLIGTLVMLIGGYLGE---T------G--LYG---------V----------------------GA------TFG-FIIGMIGWAVIIWEI-----F--R-GEASQAA----D-GKEGI-K-S-A-F-N-AL-RIIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env3-a]_DQ203678 [unk-env3-a] medHO155B7_env_samples_DQ203678 gi|77547804|gb|DQ203678| Uncultured bacterium clone medHO155B7 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO155B7 predicted proteorhodopsin gene, partial cds DQ203678 [[root proteorhodopsin/env cluster 3/A subcluster]] root proteorhodopsin env cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_55m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATTACTGTTCCTCTATTGATGATAGAGTTTTATATAATATTGAAAGCAGTTGGTGCTTCAGTGTCAGCTAATTCATTTTGGAGATTGTTAATTGGTACTCTAGTTATGCTAATTGGTGGTTATCTTGGTGAAACTGGATTGTACGGTGTCGGTGCTACTTTTGGCTTCATCATCGGTATGATTGGTTGGGCTGTTATTATTTGGGAAATCTTCAGAGGTGAAGCAAGTCAAGCTGCAGATGGAAAAGAAGGTATCAAATCAGCTTTTAATGCTCTAAGAATCATTGTTCTTGTTGGTTGGGCAATCTATCCA RYIDWLITVPLLMIEFYIILKAVGASVSANSFWRLLIGTLVMLIGGYLGETGLYGVGATFGFIIGMIGWAVIIWEIFRGEASQAADGKEGIKSAFNALRIIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATTACTGTTCCTCTATTGATGATAGAGTTTTATATAATATTGAAAGCA---------GTTGGTGCTTCAGTGTCAGCT---AATTCA------------------------------------TTTTGGAGA---TTGTTAATTGGTACTCTAGTTATGCTAATTGGTGGTTATCTTGGTGAA---------ACT------------------GGA------TTGTACGGT---------------------------GTC------------------------------------------------------------------GGTGCT------------------ACTTTTGGC---TTCATCATCGGTATGATTGGTTGGGCTGTTATTATTTGGGAAATC---------------TTC------AGA---GGTGAAGCAAGTCAAGCTGCA------------GAT---GGAAAAGAAGGTATC---AAA---TCA---GCT---TTT---AAT---GCTCTA---AGAATCATTGTTCTTGTT---------------------------------------------------------------GGTTGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMIEFYIILKA---VGASVSA-NS------------FWR-LLIGTLVMLIGGYLGE---T------G--LYG---------V----------------------GA------TFG-FIIGMIGWAVIIWEI-----F--R-GEASQAA----D-GKEGI-K-S-A-F-N-AL-RIIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env3-a]_DQ203542 [unk-env3-a] MedHO1202E3_env_samples_DQ203542 gi|77547532|gb|DQ203542| Uncultured bacterium clone MedHO1202E3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202E3 predicted proteorhodopsin gene, partial cds DQ203542 [[root proteorhodopsin/env cluster 3/A subcluster]] root proteorhodopsin env cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATTACTGTTCCTCTATTGATGATCGAGTTTTATATAATATTGAAAGCAGTTGGTGCTTCAGTTTCAGCTAATTCATTTTGGAGATTGTTAATTGGTACTCTAGTTATGCTAATTGGTGGTTATCTTGGTGAAACTGGATTGTATGGTGTCGGTGCTACTTTTGGCTTCATCATCGGTATGATTGGTTGGGCTGTTATTATTTGGGAAATCTTCAGAGGTGAAGCAAGTCAAGCTGCTGATGGAAAAGAAGGTATCAAATCAGCTTTTAATGCTCTAAGAATCATTGTTCTTGTTGGGTGGGCAATTTATCCA RYIDWLITVPLLMIEFYIILKAVGASVSANSFWRLLIGTLVMLIGGYLGETGLYGVGATFGFIIGMIGWAVIIWEIFRGEASQAADGKEGIKSAFNALRIIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATTACTGTTCCTCTATTGATGATCGAGTTTTATATAATATTGAAAGCA---------GTTGGTGCTTCAGTTTCAGCT---AATTCA------------------------------------TTTTGGAGA---TTGTTAATTGGTACTCTAGTTATGCTAATTGGTGGTTATCTTGGTGAA---------ACT------------------GGA------TTGTATGGT---------------------------GTC------------------------------------------------------------------GGTGCT------------------ACTTTTGGC---TTCATCATCGGTATGATTGGTTGGGCTGTTATTATTTGGGAAATC---------------TTC------AGA---GGTGAAGCAAGTCAAGCTGCT------------GAT---GGAAAAGAAGGTATC---AAA---TCA---GCT---TTT---AAT---GCTCTA---AGAATCATTGTTCTTGTT---------------------------------------------------------------GGGTGG---------GCAATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMIEFYIILKA---VGASVSA-NS------------FWR-LLIGTLVMLIGGYLGE---T------G--LYG---------V----------------------GA------TFG-FIIGMIGWAVIIWEI-----F--R-GEASQAA----D-GKEGI-K-S-A-F-N-AL-RIIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env3-a]_FJ560752 [unk-env3-a] HEL3_env_samples_FJ560752 gi|223868651|gb|FJ560752| Uncultured microorganism clone HEL3 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL3 putative proteorhodopsin gene, partial cds FJ560752 [[root proteorhodopsin/env cluster 3/A subcluster]] root proteorhodopsin env cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTTCCTCTATTGATGATTGAGTTCTATATCATATTGAAAGCAGTTGGTGCTTCAGTTTCAGCTAATTCATTTTGGAGATTGTTAATTGGTACTCTAGTTATGCTAATTGGTGGTTATCTTGGTGAAACTGGATTGTATGGTGTCGGTGCTACTTTTGGCTTCATCATCGGTATGATTGGTTGGGCTGTTATTATTTGGGAAATCTTCAGAGGTGAAGCAAGTCAAGCTGCTGATGGAAAAGAAGGTATCAAATCAGCTGTGTTAATGCTC TVPLLMIEFYIILKAVGASVSANSFWRLLIGTLVMLIGGYLGETGLYGVGATFGFIIGMIGWAVIIWEIFRGEASQAADGKEGIKSAVLML ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTTCCTCTATTGATGATTGAGTTCTATATCATATTGAAAGCA---------GTTGGTGCTTCAGTTTCAGCT---AATTCA------------------------------------TTTTGGAGA---TTGTTAATTGGTACTCTAGTTATGCTAATTGGTGGTTATCTTGGTGAA---------ACT------------------GGA------TTGTATGGT---------------------------GTC------------------------------------------------------------------GGTGCT------------------ACTTTTGGC---TTCATCATCGGTATGATTGGTTGGGCTGTTATTATTTGGGAAATC---------------TTC------AGA---GGTGAAGCAAGTCAAGCTGCT------------GAT---GGAAAAGAAGGTATC---AAA---TCA---GCT---GTG---TTA---ATGCTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMIEFYIILKA---VGASVSA-NS------------FWR-LLIGTLVMLIGGYLGE---T------G--LYG---------V----------------------GA------TFG-FIIGMIGWAVIIWEI-----F--R-GEASQAA----D-GKEGI-K-S-A-V-L-ML--------------------------------------------------------------------------------------------------------------------------------------- [unk-env3-a]_FJ560803 [unk-env3-a] HEL77_env_samples_FJ560803 gi|223868753|gb|FJ560803| Uncultured microorganism clone HEL77 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL77 putative proteorhodopsin gene, partial cds FJ560803 [[root proteorhodopsin/env cluster 3/A subcluster]] root proteorhodopsin env cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTTCCTCTATTGATGATTGAGTTTTATATCATATTGAAAGCAGTTGGTGCTTCAGTTTCAGCTAATTCATTTTGGAGATTGTTAATTGGTACTCTAGTTATGCTAATTGGTGGTTATCTTGGTGAAACTGGATTGTATGGTGTCGGTGCTACTTTTGGCTTCATCATCGGTATGATTGGTTGGGCTGTTATTATTTGGGAAATCTTCAGAGGTGAAGGAAGTCAAGCTGCTGATGGAAAAGAAGGTATCACCATTTCAAACGGGAGA TVPLLMIEFYIILKAVGASVSANSFWRLLIGTLVMLIGGYLGETGLYGVGATFGFIIGMIGWAVIIWEIFRGEGSQAADGKEGITISNGR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTTCCTCTATTGATGATTGAGTTTTATATCATATTGAAAGCA---------GTTGGTGCTTCAGTTTCAGCT---AATTCA------------------------------------TTTTGGAGA---TTGTTAATTGGTACTCTAGTTATGCTAATTGGTGGTTATCTTGGTGAA---------ACT------------------GGA------TTGTATGGT---------------------------GTC------------------------------------------------------------------GGTGCT------------------ACTTTTGGC---TTCATCATCGGTATGATTGGTTGGGCTGTTATTATTTGGGAAATC---------------TTC------AGA---GGTGAAGGAAGTCAAGCTGCT------------GAT---GGAAAAGAAGGTATC---ACC---ATT---TCA---AAC---GGG---AGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMIEFYIILKA---VGASVSA-NS------------FWR-LLIGTLVMLIGGYLGE---T------G--LYG---------V----------------------GA------TFG-FIIGMIGWAVIIWEI-----F--R-GEGSQAA----D-GKEGI-T-I-S-N-G-R---------------------------------------------------------------------------------------------------------------------------------------- [unk-env3-a]_DQ203367 [unk-env3-a] MedHO102C3_env_samples_DQ203367 gi|77547182|gb|DQ203367| Uncultured bacterium clone MedHO102C3 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO102C3 predicted proteorhodopsin gene, partial cds DQ203367 [[root proteorhodopsin/env cluster 3/A subcluster]] root proteorhodopsin env cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_0m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATTACAGTACCTCTATTGATGATTGAGTTCTACATAATATTGAAGGCAGTTGGTGCCTCAGTGTCAGCTAATTCATTTTGGAGATTATTAATTGGTACTCTAGTTATGCTAATTGGTGGATACCTTGGAGAAACTGGATTATACGGTGTTGGAACTACCTTTGGTTTCATCATAGGTATGATTGGTTGGGCAGTTATTATTTGGGAAATCTTCAGAGGTGAAGCAAGTCAAGCTGCAGATGGAAAAGAGGGTATTAAGTCAGCTTTCAACGCTTTAAGAATTATTGTTCTTGTAGGGTGGGCCATTTATCCA RYIDWLITVPLLMIEFYIILKAVGASVSANSFWRLLIGTLVMLIGGYLGETGLYGVGTTFGFIIGMIGWAVIIWEIFRGEASQAADGKEGIKSAFNALRIIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATTACAGTACCTCTATTGATGATTGAGTTCTACATAATATTGAAGGCA---------GTTGGTGCCTCAGTGTCAGCT---AATTCA------------------------------------TTTTGGAGA---TTATTAATTGGTACTCTAGTTATGCTAATTGGTGGATACCTTGGAGAA---------ACT------------------GGA------TTATACGGT---------------------------GTT------------------------------------------------------------------GGAACT------------------ACCTTTGGT---TTCATCATAGGTATGATTGGTTGGGCAGTTATTATTTGGGAAATC---------------TTC------AGA---GGTGAAGCAAGTCAAGCTGCA------------GAT---GGAAAAGAGGGTATT---AAG---TCA---GCT---TTC---AAC---GCTTTA---AGAATTATTGTTCTTGTA---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMIEFYIILKA---VGASVSA-NS------------FWR-LLIGTLVMLIGGYLGE---T------G--LYG---------V----------------------GT------TFG-FIIGMIGWAVIIWEI-----F--R-GEASQAA----D-GKEGI-K-S-A-F-N-AL-RIIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env3-a]_FJ560768 [unk-env3-a] HEL27_env_samples_FJ560768 gi|223868683|gb|FJ560768| Uncultured microorganism clone HEL27 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL27 putative proteorhodopsin gene, partial cds FJ560768 [[root proteorhodopsin/env cluster 3/A subcluster]] root proteorhodopsin env cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTCCCTCTGTTGATGATTGAATTTTATATAATATTGAAGGCAGTTGGTGCATCAGTATCAGCTAATTCATTTTGGAGATTATTAATTGGTACTCTAGTTATGCTAATTGGTGGTTACCTTGGAGAAACTGGATTATACGGAGTTGGGGCCACCTTTGGTTTCATCATTGGTATGATTGGTTGGGCAGTTATTATTTGGGAAATCTTCAGAGGTGAAGGAAGTCAAGCTGCAGATGGAAAAGAAGGTATTAAGTCTAAATGGTCAACGCTT TVPLLMIEFYIILKAVGASVSANSFWRLLIGTLVMLIGGYLGETGLYGVGATFGFIIGMIGWAVIIWEIFRGEGSQAADGKEGIKSKWSTL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTCCCTCTGTTGATGATTGAATTTTATATAATATTGAAGGCA---------GTTGGTGCATCAGTATCAGCT---AATTCA------------------------------------TTTTGGAGA---TTATTAATTGGTACTCTAGTTATGCTAATTGGTGGTTACCTTGGAGAA---------ACT------------------GGA------TTATACGGA---------------------------GTT------------------------------------------------------------------GGGGCC------------------ACCTTTGGT---TTCATCATTGGTATGATTGGTTGGGCAGTTATTATTTGGGAAATC---------------TTC------AGA---GGTGAAGGAAGTCAAGCTGCA------------GAT---GGAAAAGAAGGTATT---AAG---TCT---AAA---TGG---TCA---ACGCTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLMIEFYIILKA---VGASVSA-NS------------FWR-LLIGTLVMLIGGYLGE---T------G--LYG---------V----------------------GA------TFG-FIIGMIGWAVIIWEI-----F--R-GEGSQAA----D-GKEGI-K-S-K-W-S-TL--------------------------------------------------------------------------------------------------------------------------------------- [unk-env3-a]_DQ203549 [unk-env3-a] MedHO1202F1_env_samples_DQ203549 gi|77547546|gb|DQ203549| Uncultured bacterium clone MedHO1202F1 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202F1 predicted proteorhodopsin gene, partial cds DQ203549 [[root proteorhodopsin/env cluster 3/A subcluster]] root proteorhodopsin env cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATTACAGTCCCTTTATTGATGATTGAATTTTATATAATTTTGAAGGCAGTTGGTGCCTCAGTATCAGCTAATTCATTTTGGAGATTATTAATTGGTACTCTAGTTATGCTAATTGGTGGTTACCTTGGAGAAACCGGATTATACGGTGTTGGAGTTACTTTTGGTTTCATCATTGGTATGATTGGTTGGGCAGTTATTATTTGGGAAATCTTTAGAGGTGAAGCAAGTCAAGCTGCAGATGGAAAAGAAGGTATTAAATCTGCTTTCAACGCTTTAAGAATTATTGTTCTTGTAGGTTGGGCGATTTATCCA RYIDWLITVPLLMIEFYIILKAVGASVSANSFWRLLIGTLVMLIGGYLGETGLYGVGVTFGFIIGMIGWAVIIWEIFRGEASQAADGKEGIKSAFNALRIIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATTACAGTCCCTTTATTGATGATTGAATTTTATATAATTTTGAAGGCA---------GTTGGTGCCTCAGTATCAGCT---AATTCA------------------------------------TTTTGGAGA---TTATTAATTGGTACTCTAGTTATGCTAATTGGTGGTTACCTTGGAGAA---------ACC------------------GGA------TTATACGGT---------------------------GTT------------------------------------------------------------------GGAGTT------------------ACTTTTGGT---TTCATCATTGGTATGATTGGTTGGGCAGTTATTATTTGGGAAATC---------------TTT------AGA---GGTGAAGCAAGTCAAGCTGCA------------GAT---GGAAAAGAAGGTATT---AAA---TCT---GCT---TTC---AAC---GCTTTA---AGAATTATTGTTCTTGTA---------------------------------------------------------------GGTTGG---------GCGATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMIEFYIILKA---VGASVSA-NS------------FWR-LLIGTLVMLIGGYLGE---T------G--LYG---------V----------------------GV------TFG-FIIGMIGWAVIIWEI-----F--R-GEASQAA----D-GKEGI-K-S-A-F-N-AL-RIIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env3-a]_DQ203539 [unk-env3-a] MedHO1202E11_env_samples_DQ203539 gi|77547526|gb|DQ203539| Uncultured bacterium clone MedHO1202E11 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone MedHO1202E11 predicted proteorhodopsin gene, partial cds DQ203539 [[root proteorhodopsin/env cluster 3/A subcluster]] root proteorhodopsin env cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATACATTGATTGGCTAATTACTGTTCCTCTATTGATGATTGAATTCTATATAATATTGAAGGCAGTTGGTGCCTCAGTATCAGCTAATTCATTTTGGAGATTATTAATTGGAACTTTAGTGATGCTAATAGGTGGTTACCTTGGAGAAACTGGATTATATGGTGTTGGCGCTACTTTTGGCTTCATCATTGGTATGATTGGTTGGGCAGTTATTATTTGGGAAATCTTCAGAGGTGAAGCAAGTCAAGCTGCAGATGGAAAAGAAGGTATTAAATCTGCTTTCAATGCTTTGAGAATTATTGTTCTTGTAGGTTGGGCGATTTATCCA RYIDWLITVPLLMIEFYIILKAVGASVSANSFWRLLIGTLVMLIGGYLGETGLYGVGATFGFIIGMIGWAVIIWEIFRGEASQAADGKEGIKSAFNALRIIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATTGATTGG------------------------CTAATTACTGTTCCTCTATTGATGATTGAATTCTATATAATATTGAAGGCA---------GTTGGTGCCTCAGTATCAGCT---AATTCA------------------------------------TTTTGGAGA---TTATTAATTGGAACTTTAGTGATGCTAATAGGTGGTTACCTTGGAGAA---------ACT------------------GGA------TTATATGGT---------------------------GTT------------------------------------------------------------------GGCGCT------------------ACTTTTGGC---TTCATCATTGGTATGATTGGTTGGGCAGTTATTATTTGGGAAATC---------------TTC------AGA---GGTGAAGCAAGTCAAGCTGCA------------GAT---GGAAAAGAAGGTATT---AAA---TCT---GCT---TTC---AAT---GCTTTG---AGAATTATTGTTCTTGTA---------------------------------------------------------------GGTTGG---------GCGATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMIEFYIILKA---VGASVSA-NS------------FWR-LLIGTLVMLIGGYLGE---T------G--LYG---------V----------------------GA------TFG-FIIGMIGWAVIIWEI-----F--R-GEASQAA----D-GKEGI-K-S-A-F-N-AL-RIIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env3-a]_DQ203609 [unk-env3-a] medHO120C8_env_samples_DQ203609 gi|77547666|gb|DQ203609| Uncultured bacterium clone medHO120C8 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120C8 predicted proteorhodopsin gene, partial cds DQ203609 [[root proteorhodopsin/env cluster 3/A subcluster]] root proteorhodopsin env cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na CGATACATTGATTGGCTAATTACTGTTCCTCTATTGATGATTGAATTCTATATAATATTGAAGGCAGTTGGTGCCTCAGTATCAGCTAATTCATTTTGGAGATTATTAATTGGAACTTTAGTGATGCTAATAGGTGGTTACCTTGGAGAAACTGGATTATATGGTGTTGGCGCTACTTTTGGCTTCATCATTGGTATGATTGGTTGGGCAGTTATTATTTGGGAAATCTTCAGAGGTGAAGCAAGTCAAGCTGCAGATGGAAAAGAAGGTATTAAATCTGCTTTCAATGCTTTGAGAATTATTGTTCTTGTAGGTTGGGCCATTTATCCA RYIDWLITVPLLMIEFYIILKAVGASVSANSFWRLLIGTLVMLIGGYLGETGLYGVGATFGFIIGMIGWAVIIWEIFRGEASQAADGKEGIKSAFNALRIIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATTGATTGG------------------------CTAATTACTGTTCCTCTATTGATGATTGAATTCTATATAATATTGAAGGCA---------GTTGGTGCCTCAGTATCAGCT---AATTCA------------------------------------TTTTGGAGA---TTATTAATTGGAACTTTAGTGATGCTAATAGGTGGTTACCTTGGAGAA---------ACT------------------GGA------TTATATGGT---------------------------GTT------------------------------------------------------------------GGCGCT------------------ACTTTTGGC---TTCATCATTGGTATGATTGGTTGGGCAGTTATTATTTGGGAAATC---------------TTC------AGA---GGTGAAGCAAGTCAAGCTGCA------------GAT---GGAAAAGAAGGTATT---AAA---TCT---GCT---TTC---AAT---GCTTTG---AGAATTATTGTTCTTGTA---------------------------------------------------------------GGTTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMIEFYIILKA---VGASVSA-NS------------FWR-LLIGTLVMLIGGYLGE---T------G--LYG---------V----------------------GA------TFG-FIIGMIGWAVIIWEI-----F--R-GEASQAA----D-GKEGI-K-S-A-F-N-AL-RIIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env3-a]_DQ203595 [unk-env3-a] medHO120B11_env_samples_DQ203595 gi|77547638|gb|DQ203595| Uncultured bacterium clone medHO120B11 predicted proteorhodopsin gene, partial cds Uncultured bacterium clone medHO120B11 predicted proteorhodopsin gene, partial cds DQ203595 [[root proteorhodopsin/env cluster 3/A subcluster]] root proteorhodopsin env cluster 3 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 08-MAY-2007 #na collected_from_a_depth_of_20m_at_station_HO1_from_the_Mediterranean_Sea_in_May_2003 Mediterranean Sea marine 32.9 34.9167 Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas Sabehi,G., Kirkup,B.C., Rozenberg,M., Stambler,N., Polz,M.F. and Beja,O. ISME J 1 (1), 4855 (2007) 18043613 #na AGATACATTGATTGGCTAATTACTGTTCCTCTATTGATGATTGAATTCTATATAATATTGAAGGCAGTTGGTGCCTCAGTATCAGCTAATTCATTTTGGAGATTATTAATTGGAACTTTAGTGATGCTAATAGGTGGTTACCTTGGAGAAACTGGATTATATGGTGTTGGCGCTACTTTTGGCTTCATCATTGGTATGATTGGTTGGGCAGTTATTATTTGGGAAATCTTCAGAGGTGAAGCAAGTCAAGCTGCAGATGGAAAAGAAGGTATTAAATCTGCTTTCAATGCTTTGAGAATTATTGTTCTTGTAGGGTGGGCCATTTATCCA RYIDWLITVPLLMIEFYIILKAVGASVSANSFWRLLIGTLVMLIGGYLGETGLYGVGATFGFIIGMIGWAVIIWEIFRGEASQAADGKEGIKSAFNALRIIVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACATTGATTGG------------------------CTAATTACTGTTCCTCTATTGATGATTGAATTCTATATAATATTGAAGGCA---------GTTGGTGCCTCAGTATCAGCT---AATTCA------------------------------------TTTTGGAGA---TTATTAATTGGAACTTTAGTGATGCTAATAGGTGGTTACCTTGGAGAA---------ACT------------------GGA------TTATATGGT---------------------------GTT------------------------------------------------------------------GGCGCT------------------ACTTTTGGC---TTCATCATTGGTATGATTGGTTGGGCAGTTATTATTTGGGAAATC---------------TTC------AGA---GGTGAAGCAAGTCAAGCTGCA------------GAT---GGAAAAGAAGGTATT---AAA---TCT---GCT---TTC---AAT---GCTTTG---AGAATTATTGTTCTTGTA---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMIEFYIILKA---VGASVSA-NS------------FWR-LLIGTLVMLIGGYLGE---T------G--LYG---------V----------------------GA------TFG-FIIGMIGWAVIIWEI-----F--R-GEASQAA----D-GKEGI-K-S-A-F-N-AL-RIIVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Beta1]_HQ663784 [unk-Beta1] SCGC_AAA043E02_Betaproteobacteria_HQ663784 gi|325163167|gb|HQ663784| Beta proteobacterium SCGC AAA043E02 rhodopsin gene, partial cds Beta proteobacterium SCGC AAA043E02 rhodopsin gene, partial cds HQ663784 [[root proteorhodopsin/Betaproteobacterial-like cluster 1]] root proteorhodopsin Betaproteobacterial-like cluster 1 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Betaproteobacteria] taxon:938819 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATATTGATTGGCTAATTACAGTACCTTTATTAATGATTGAATTCTATTTAATTCTTTCAGCTATTACTAAAGTTTCCACTGGTGTGTTTTGGAGACTTGTAATTGGTACATTAGTGATGCTTGTTGGAGGTTATGTCGGTGAAGCTGGTTATGCCGATGTGATGACATCATTTATTGTTGGTATGCTTGGTTGGTTTTATATTCTCTACGAAATTTTCGCTGGTGAAGCAAGTAAAATCAGTGCAAATAAAGCTCCAAAAACTGTACAAAAAGCTTTCAATACAATGCGATTAATTGTTACATTTGGTTGGGCCATTTATCCGGTCATA YIDWLITVPLLMIEFYLILSAITKVSTGVFWRLVIGTLVMLVGGYVGEAGYADVMTSFIVGMLGWFYILYEIFAGEASKISANKAPKTVQKAFNTMRLIVTFGWAIYPVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATTGATTGG------------------------CTAATTACAGTACCTTTATTAATGATTGAATTCTATTTAATTCTTTCAGCT---------ATT---ACTAAAGTTTCCACT---GGTGTG------------------------------------TTTTGGAGA---CTTGTAATTGGTACATTAGTGATGCTTGTTGGAGGTTATGTCGGTGAA---------GCT------------------GGT------TAT---------------------------------GCC------------------------------------------------------------------GATGTG------------------ATGACATCA---TTTATTGTTGGTATGCTTGGTTGGTTTTATATTCTCTACGAAATT---------------TTC------GCT---GGTGAAGCAAGTAAAATCAGTGCAAAT------AAA---GCTCCAAAAACTGTA---CAA---AAA---GCT---TTC---AAT---ACAATG---CGATTAATTGTTACATTT---------------------------------------------------------------GGTTGG---------GCCATTTATCCGGTCATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YIDW--------LITVPLLMIEFYLILSA---I-TKVST-GV------------FWR-LVIGTLVMLVGGYVGE---A------G--Y-----------A----------------------DV------MTS-FIVGMLGWFYILYEI-----F--A-GEASKISAN--K-APKTV-Q-K-A-F-N-TM-RLIVTF---------------------GW---AIYPVI------------------------------------------------------------------------------------------------ [unk-Beta1]_HQ663786 [unk-Beta1] SCGC_AAA043J07_Betaproteobacteria_HQ663786 gi|325163171|gb|HQ663786| Beta proteobacterium SCGC AAA043J07 rhodopsin gene, partial cds Beta proteobacterium SCGC AAA043J07 rhodopsin gene, partial cds HQ663786 [[root proteorhodopsin/Betaproteobacterial-like cluster 1]] root proteorhodopsin Betaproteobacterial-like cluster 1 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Betaproteobacteria] taxon:938823 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) ATTGATTGGCTAATTACAGTACCTTTATTAATGATTGAATTCTATTTAATTCTTTCAGCTATTACTAAAGTTTCCACTGGTGTGTTTTGGAGACTTGTAATTGGTACATTAGTGATGCTTGTTGGAGGTTATGTCGGTGAAGCTGGTTATGCCAATGTGATGACATCATTTATTGTTGGTATGCTTGGTTGGTTTTATATTCTCTACGAAATTTTCGCTGGTGAAGCAAGTAAAATCAGTGCAAATAAAGCTCCAAAAACTGTACAAAAAGCTTTCAATACAATGCGATTAATTGTTACATTTGGTTGGGCCATTTACCCGGTC IDWLITVPLLMIEFYLILSAITKVSTGVFWRLVIGTLVMLVGGYVGEAGYANVMTSFIVGMLGWFYILYEIFAGEASKISANKAPKTVQKAFNTMRLIVTFGWAIYPV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGATTGG------------------------CTAATTACAGTACCTTTATTAATGATTGAATTCTATTTAATTCTTTCAGCT---------ATT---ACTAAAGTTTCCACT---GGTGTG------------------------------------TTTTGGAGA---CTTGTAATTGGTACATTAGTGATGCTTGTTGGAGGTTATGTCGGTGAA---------GCT------------------GGT------TAT---------------------------------GCC------------------------------------------------------------------AATGTG------------------ATGACATCA---TTTATTGTTGGTATGCTTGGTTGGTTTTATATTCTCTACGAAATT---------------TTC------GCT---GGTGAAGCAAGTAAAATCAGTGCAAAT------AAA---GCTCCAAAAACTGTA---CAA---AAA---GCT---TTC---AAT---ACAATG---CGATTAATTGTTACATTT---------------------------------------------------------------GGTTGG---------GCCATTTACCCGGTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDW--------LITVPLLMIEFYLILSA---I-TKVST-GV------------FWR-LVIGTLVMLVGGYVGE---A------G--Y-----------A----------------------NV------MTS-FIVGMLGWFYILYEI-----F--A-GEASKISAN--K-APKTV-Q-K-A-F-N-TM-RLIVTF---------------------GW---AIYPV------------------------------------------------------------------------------------------------- [unk-Beta1]_HQ663831 [unk-Beta1] SCGC_AAA278O22_Actinobacteria_HQ663831 gi|325163258|gb|HQ663831| Actinobacterium SCGC AAA278O22 rhodopsin gene, partial cds Actinobacterium SCGC AAA278O22 rhodopsin gene, partial cds HQ663831 [[root proteorhodopsin/Betaproteobacterial-like cluster 1]] root proteorhodopsin Betaproteobacterial-like cluster 1 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938580 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TACATTGATTGGCTAATTACAGTACCTTTATTAATGATTGAATTCTATTTAATTCTTTCAGCTATTACTAAAGTTTCCACTGGTGTGTTTTGGAGACTTGTAATTGGTACATTAGTGATGCTTGTTGGAGGTTATGTCGGTGAAGCTGGTTATGCCGATGTGATGACATCATTTATTGTTGGTATGCTTGGTTGGTTTTATATTCTCTACGAAATTTTCGCTGGTGAAGCAAGTAAAATCAGTGCAAATAAAGCTCCAAAAACTGTACAAAAAGCTTTCAATACAATGCGATTAATTGTTACATTTGGATGGGCCATTTACCCGGTCATAGCT YIDWLITVPLLMIEFYLILSAITKVSTGVFWRLVIGTLVMLVGGYVGEAGYADVMTSFIVGMLGWFYILYEIFAGEASKISANKAPKTVQKAFNTMRLIVTFGWAIYPVIA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACATTGATTGG------------------------CTAATTACAGTACCTTTATTAATGATTGAATTCTATTTAATTCTTTCAGCT---------ATT---ACTAAAGTTTCCACT---GGTGTG------------------------------------TTTTGGAGA---CTTGTAATTGGTACATTAGTGATGCTTGTTGGAGGTTATGTCGGTGAA---------GCT------------------GGT------TAT---------------------------------GCC------------------------------------------------------------------GATGTG------------------ATGACATCA---TTTATTGTTGGTATGCTTGGTTGGTTTTATATTCTCTACGAAATT---------------TTC------GCT---GGTGAAGCAAGTAAAATCAGTGCAAAT------AAA---GCTCCAAAAACTGTA---CAA---AAA---GCT---TTC---AAT---ACAATG---CGATTAATTGTTACATTT---------------------------------------------------------------GGATGG---------GCCATTTACCCGGTCATAGCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YIDW--------LITVPLLMIEFYLILSA---I-TKVST-GV------------FWR-LVIGTLVMLVGGYVGE---A------G--Y-----------A----------------------DV------MTS-FIVGMLGWFYILYEI-----F--A-GEASKISAN--K-APKTV-Q-K-A-F-N-TM-RLIVTF---------------------GW---AIYPVIA----------------------------------------------------------------------------------------------- [unk-Beta1]_HQ663842 [unk-Beta1] SCGC_AAA280P07_Betaproteobacteria_HQ663842 gi|325163280|gb|HQ663842| Beta proteobacterium SCGC AAA280P07 rhodopsin gene, partial cds Beta proteobacterium SCGC AAA280P07 rhodopsin gene, partial cds HQ663842 [[root proteorhodopsin/Betaproteobacterial-like cluster 1]] root proteorhodopsin Betaproteobacterial-like cluster 1 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Betaproteobacteria] taxon:938846 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATATTGATTGGCTAATTACAGTACCTTTATTAATGATTGAATTCTATTTAATTCTTTCAGCTATTACTAAAGTTTCCACTGGTGTGTTTTGGAGACTTGTAATTGGTACATTAGTGATGCTTGTTGGAGGTTATGTCGGTGAAGCTGGTTATGCCGATGTGATGACATCATTTATTGTTGGTATGCTTGGTTGGTTTTATATTCTCTACGAAATTTTCGCTGGTGAAGCAAGTAAAATCAGTGCAAATAAAGCTCCAAAAACTGTACAAAAAGCTTTCAATACAATGCGATTAATTGTTACATTTGGATGGGCCATTTACCCG YIDWLITVPLLMIEFYLILSAITKVSTGVFWRLVIGTLVMLVGGYVGEAGYADVMTSFIVGMLGWFYILYEIFAGEASKISANKAPKTVQKAFNTMRLIVTFGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATTGATTGG------------------------CTAATTACAGTACCTTTATTAATGATTGAATTCTATTTAATTCTTTCAGCT---------ATT---ACTAAAGTTTCCACT---GGTGTG------------------------------------TTTTGGAGA---CTTGTAATTGGTACATTAGTGATGCTTGTTGGAGGTTATGTCGGTGAA---------GCT------------------GGT------TAT---------------------------------GCC------------------------------------------------------------------GATGTG------------------ATGACATCA---TTTATTGTTGGTATGCTTGGTTGGTTTTATATTCTCTACGAAATT---------------TTC------GCT---GGTGAAGCAAGTAAAATCAGTGCAAAT------AAA---GCTCCAAAAACTGTA---CAA---AAA---GCT---TTC---AAT---ACAATG---CGATTAATTGTTACATTT---------------------------------------------------------------GGATGG---------GCCATTTACCCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YIDW--------LITVPLLMIEFYLILSA---I-TKVST-GV------------FWR-LVIGTLVMLVGGYVGE---A------G--Y-----------A----------------------DV------MTS-FIVGMLGWFYILYEI-----F--A-GEASKISAN--K-APKTV-Q-K-A-F-N-TM-RLIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-Beta1]_HQ663739 [unk-Beta1] SCGC_AAA027A14_Betaproteobacteria_HQ663739 gi|325163078|gb|HQ663739| Beta proteobacterium SCGC AAA027A14 rhodopsin gene, partial cds Beta proteobacterium SCGC AAA027A14 rhodopsin gene, partial cds HQ663739 [[root proteorhodopsin/Betaproteobacterial-like cluster 1]] root proteorhodopsin Betaproteobacterial-like cluster 1 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Betaproteobacteria] taxon:938769 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Mendota other freshwater 46.0095 -89.7006 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATATTGATTGGTTAATTACAGTGCCTTTATTAATGATTGAATTCTATTTAATTCTTTCAGCGATTACGAAAGTTTCTAAAGGCGTCTTTTGGAGACTTGTAATTGGTACATTAGTAATGCTTGTTGGAGGTTATGTCGGTGAGGCTGGTTATGCCGATGTTATGACATCATTCATTGTTGGTATGCTTGGATGGTTCTATATCCTTTACGAAATTTTTGCTGGTGAAGCAAGTAAAATCGCTGCAAATAAAGCTCCAGCAACAGTTCAAAAAGCCTTCCATACAATGCGATTAATTGTTACATTTGGATGGGCCATTTACCCGGTCATA YIDWLITVPLLMIEFYLILSAITKVSKGVFWRLVIGTLVMLVGGYVGEAGYADVMTSFIVGMLGWFYILYEIFAGEASKIAANKAPATVQKAFHTMRLIVTFGWAIYPVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATTGATTGG------------------------TTAATTACAGTGCCTTTATTAATGATTGAATTCTATTTAATTCTTTCAGCG---------ATT---ACGAAAGTTTCTAAA---GGCGTC------------------------------------TTTTGGAGA---CTTGTAATTGGTACATTAGTAATGCTTGTTGGAGGTTATGTCGGTGAG---------GCT------------------GGT------TAT---------------------------------GCC------------------------------------------------------------------GATGTT------------------ATGACATCA---TTCATTGTTGGTATGCTTGGATGGTTCTATATCCTTTACGAAATT---------------TTT------GCT---GGTGAAGCAAGTAAAATCGCTGCAAAT------AAA---GCTCCAGCAACAGTT---CAA---AAA---GCC---TTC---CAT---ACAATG---CGATTAATTGTTACATTT---------------------------------------------------------------GGATGG---------GCCATTTACCCGGTCATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YIDW--------LITVPLLMIEFYLILSA---I-TKVSK-GV------------FWR-LVIGTLVMLVGGYVGE---A------G--Y-----------A----------------------DV------MTS-FIVGMLGWFYILYEI-----F--A-GEASKIAAN--K-APATV-Q-K-A-F-H-TM-RLIVTF---------------------GW---AIYPVI------------------------------------------------------------------------------------------------ [unk-Beta1]_EU563294 [unk-Beta1] Gsee1D_env_samples_EU563294 gi|171770598|gb|EU563294| Uncultured microorganism clone Gsee1D putative proteorhodopsin gene, partial cds Uncultured microorganism clone Gsee1D putative proteorhodopsin gene, partial cds EU563294 [[root proteorhodopsin/Betaproteobacterial-like cluster 1]] root proteorhodopsin Betaproteobacterial-like cluster 1 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 01-juil-06 Grosser_Ploner_See_at_1m_depth other freshwater 54.15 10.42 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na TGCGCGCAATTCTTGAGTTATATAGATTGGTTAATTACAGTGCCTTTATTAATGATTGAATTTTATTTAGTTCTTTCAGCGATTACTAAGGTTTCCAACGGTGTTTTTTGGAGACTTTTAATTGGTACTTTAGTTATGCTTGGCGGTGGGTATGCTGGTGAAGCTGGTTACGCAGACGTTATGACATCATTCATTATTGGTATGCTTGGATGGGCTTATATCCTCTACGAAATTTTCGCTGGTGAAGCAGGTAAGATCAATGCAAACAAAGCTCCAGCAACAGTGCAAAAAGCTTTCAATACAATGCGATTAATTGTTACATTTGGCTGGGCAATTTACCCAAGCTTGCGC CAQFLSYIDWLITVPLLMIEFYLVLSAITKVSNGVFWRLLIGTLVMLGGGYAGEAGYADVMTSFIIGMLGWAYILYEIFAGEAGKINANKAPATVQKAFNTMRLIVTFGWAIYPSLR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCGCGCAATTCTTGAGTTATATAGATTGG------------------------TTAATTACAGTGCCTTTATTAATGATTGAATTTTATTTAGTTCTTTCAGCG---------ATT---ACTAAGGTTTCCAAC---GGTGTT------------------------------------TTTTGGAGA---CTTTTAATTGGTACTTTAGTTATGCTTGGCGGTGGGTATGCTGGTGAA---------GCT------------------GGT------TAC---------------------------------GCA------------------------------------------------------------------GACGTT------------------ATGACATCA---TTCATTATTGGTATGCTTGGATGGGCTTATATCCTCTACGAAATT---------------TTC------GCT---GGTGAAGCAGGTAAGATCAATGCAAAC------AAA---GCTCCAGCAACAGTG---CAA---AAA---GCT---TTC---AAT---ACAATG---CGATTAATTGTTACATTT---------------------------------------------------------------GGCTGG---------GCAATTTACCCAAGCTTGCGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAQFLSYIDW--------LITVPLLMIEFYLVLSA---I-TKVSN-GV------------FWR-LLIGTLVMLGGGYAGE---A------G--Y-----------A----------------------DV------MTS-FIIGMLGWAYILYEI-----F--A-GEAGKINAN--K-APATV-Q-K-A-F-N-TM-RLIVTF---------------------GW---AIYPSLR----------------------------------------------------------------------------------------------- [unk-Beta1]_EU563269 [unk-Beta1] KIN20_env_samples_EU563269 gi|171770548|gb|EU563269| Uncultured microorganism clone KIN20 putative proteorhodopsin gene, partial cds Uncultured microorganism clone KIN20 putative proteorhodopsin gene, partial cds EU563269 [[root proteorhodopsin/Betaproteobacterial-like cluster 1]] root proteorhodopsin Betaproteobacterial-like cluster 1 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 2003 Lake_Kinneret other freshwater 32.08 35.07 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na CGGTATATCGATTGGCTCATTACAGTACCATTACTTATGATTGAGTTCTACTTAATCCTAGCCGCAATTACTAAGGTATCAACAGGTGTTTTTTGGAGACTTGTATTAGGTACTTTAGTGATGCTAGTTGGCGGTTATGTTGGCGAAGCTGGTTATGCTGACGTGATGACATCATTTATCGTAGGTATGCTCGGATGGTTCTATATCCTTTACGAAATCTTTGCTGGTGAAGCGAGCAAAATTAGTGCAAATAAAGCGCCTGCTACTGTGCAAAAAGCTTTTAACACTATGAGATTGATTGTAACTTTTGGGTGGGCCATATACCCA RYIDWLITVPLLMIEFYLILAAITKVSTGVFWRLVLGTLVMLVGGYVGEAGYADVMTSFIVGMLGWFYILYEIFAGEASKISANKAPATVQKAFNTMRLIVTFGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTATATCGATTGG------------------------CTCATTACAGTACCATTACTTATGATTGAGTTCTACTTAATCCTAGCCGCA---------ATT---ACTAAGGTATCAACA---GGTGTT------------------------------------TTTTGGAGA---CTTGTATTAGGTACTTTAGTGATGCTAGTTGGCGGTTATGTTGGCGAA---------GCT------------------GGT------TAT---------------------------------GCT------------------------------------------------------------------GACGTG------------------ATGACATCA---TTTATCGTAGGTATGCTCGGATGGTTCTATATCCTTTACGAAATC---------------TTT------GCT---GGTGAAGCGAGCAAAATTAGTGCAAAT------AAA---GCGCCTGCTACTGTG---CAA---AAA---GCT---TTT---AAC---ACTATG---AGATTGATTGTAACTTTT---------------------------------------------------------------GGGTGG---------GCCATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLLMIEFYLILAA---I-TKVST-GV------------FWR-LVLGTLVMLVGGYVGE---A------G--Y-----------A----------------------DV------MTS-FIVGMLGWFYILYEI-----F--A-GEASKISAN--K-APATV-Q-K-A-F-N-TM-RLIVTF---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env2]_FJ862928 [unk-env2] 18_env_samples_FJ862928 gi|226897400|gb|FJ862928| Uncultured bacterium clone 18 putative proteorhodopsin gene, partial cds Uncultured bacterium clone 18 putative proteorhodopsin gene, partial cds FJ862928 [[root proteorhodopsin/env cluster 2]] root proteorhodopsin env cluster 2 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 07-Dec-2009 #na coastal_seawater Atlantic Ocean marine 38.8489 -75.1076 Lightdependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTTGATTGGCTTATTACTGTGCCGCTCCTTATGATAGAATTTTACCTCATCCTTTCGGCCGTCACGAAGGTGTCCGTTGGCATTTTCTGGCGACTACTCGTTGGCACAATCGTTATGTTAGTGGGCGGTTACCTTGGTGAAACAGGTTACATGAATCTCACCGCTGCCTTCATCATGGGAATGGCCGGCTGGGCCTATATCATCTATGAGATCTTTTTAGGTGAAGCTAGTAAAGTTAGTGCCAGTAAGGCACCTCCAGCAGTACAATCAGCATTTAAGACTATGCGTATAATTGTTACAGTTGGCTGGGCCATCTACGCTCGA VDWLITVPLLMIEFYLILSAVTKVSVGIFWRLLVGTIVMLVGGYLGETGYMNLTAAFIMGMAGWAYIIYEIFLGEASKVSASKAPPAVQSAFKTMRIIVTVGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGATTGG------------------------CTTATTACTGTGCCGCTCCTTATGATAGAATTTTACCTCATCCTTTCGGCC---------GTC---ACGAAGGTGTCCGTT---GGCATT------------------------------------TTCTGGCGA---CTACTCGTTGGCACAATCGTTATGTTAGTGGGCGGTTACCTTGGTGAA---------ACA------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATCTC------------------ACCGCTGCC---TTCATCATGGGAATGGCCGGCTGGGCCTATATCATCTATGAGATC---------------TTT------TTA---GGTGAAGCTAGTAAAGTTAGTGCCAGT------AAG---GCACCTCCAGCAGTA---CAA---TCA---GCA---TTT---AAG---ACTATG---CGTATAATTGTTACAGTT---------------------------------------------------------------GGCTGG---------GCCATCTACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPLLMIEFYLILSA---V-TKVSV-GI------------FWR-LLVGTIVMLVGGYLGE---T------G--Y-----------M----------------------NL------TAA-FIMGMAGWAYIIYEI-----F--L-GEASKVSAS--K-APPAV-Q-S-A-F-K-TM-RIIVTV---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [unk-env2]_FJ862947 [unk-env2] 48_env_samples_FJ862947 gi|226897438|gb|FJ862947| Uncultured bacterium clone 48 putative proteorhodopsin gene, partial cds Uncultured bacterium clone 48 putative proteorhodopsin gene, partial cds FJ862947 [[root proteorhodopsin/env cluster 2]] root proteorhodopsin env cluster 2 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 07-Dec-2009 #na coastal_seawater Atlantic Ocean marine 38.8489 -75.1076 Lightdependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTTGACTGGCTTATTACTGTGCCGCTCCTTATGATAGAATTTTACCTCATCCTTTCGGCCGTCACGAAGGTGTCCGTTGGCATTTTCTGGCGACTACTCGTTGGCACAATCGTTATGTTAGTGGGCGGTTACCTTGGTGAAACAGGTTACATGAATCTCACCGCTGCCTTCATCATCGGAATGGCCGGCTGGGCCTATATCATCTATGAGATCTTTTTAGGTGAAGCTAGTAAAGTTAGTGCCAGTAAGGCACCTCCAGCAGTACAATCAGCATTTAAGACTATGCGTATAATTGTTACAGTTGGCTGGGCAATCTACGCTCGA VDWLITVPLLMIEFYLILSAVTKVSVGIFWRLLVGTIVMLVGGYLGETGYMNLTAAFIIGMAGWAYIIYEIFLGEASKVSASKAPPAVQSAFKTMRIIVTVGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGACTGG------------------------CTTATTACTGTGCCGCTCCTTATGATAGAATTTTACCTCATCCTTTCGGCC---------GTC---ACGAAGGTGTCCGTT---GGCATT------------------------------------TTCTGGCGA---CTACTCGTTGGCACAATCGTTATGTTAGTGGGCGGTTACCTTGGTGAA---------ACA------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATCTC------------------ACCGCTGCC---TTCATCATCGGAATGGCCGGCTGGGCCTATATCATCTATGAGATC---------------TTT------TTA---GGTGAAGCTAGTAAAGTTAGTGCCAGT------AAG---GCACCTCCAGCAGTA---CAA---TCA---GCA---TTT---AAG---ACTATG---CGTATAATTGTTACAGTT---------------------------------------------------------------GGCTGG---------GCAATCTACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPLLMIEFYLILSA---V-TKVSV-GI------------FWR-LLVGTIVMLVGGYLGE---T------G--Y-----------M----------------------NL------TAA-FIIGMAGWAYIIYEI-----F--L-GEASKVSAS--K-APPAV-Q-S-A-F-K-TM-RIIVTV---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [unk-env2]_FJ862942 [unk-env2] 40_env_samples_FJ862942 gi|226897428|gb|FJ862942| Uncultured bacterium clone 40 putative proteorhodopsin gene, partial cds Uncultured bacterium clone 40 putative proteorhodopsin gene, partial cds FJ862942 [[root proteorhodopsin/env cluster 2]] root proteorhodopsin env cluster 2 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 07-Dec-2009 #na coastal_seawater Atlantic Ocean marine 38.8489 -75.1076 Lightdependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTTGATTGGCTTATTACTGTGCCGCTCCTTATGATAGAATTTTACCTCATCCTTTCGGCCGTCACGAAGGTGTCCGTTGGCATTTTCTGGCGACTACTCGTTGGCACAATCGTTATGTTAGTGGGCGGTTACCTCGGTGAAACAGGTTACATGAATCTCACCGCTGCCTTCATCATCGGAATGGCCGGCTGGGCCTATATCATCTATGAGATCTTTTTAGGTGAAGCGAGTAAAGTTAGTGCCAGTAAGGCACCTCCAGCAGTACAATCAGCATTTAAGACTATGCGTATAATTGTTACAGTTGGTTGGGCAATTTACGCTCGA VDWLITVPLLMIEFYLILSAVTKVSVGIFWRLLVGTIVMLVGGYLGETGYMNLTAAFIIGMAGWAYIIYEIFLGEASKVSASKAPPAVQSAFKTMRIIVTVGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGATTGG------------------------CTTATTACTGTGCCGCTCCTTATGATAGAATTTTACCTCATCCTTTCGGCC---------GTC---ACGAAGGTGTCCGTT---GGCATT------------------------------------TTCTGGCGA---CTACTCGTTGGCACAATCGTTATGTTAGTGGGCGGTTACCTCGGTGAA---------ACA------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATCTC------------------ACCGCTGCC---TTCATCATCGGAATGGCCGGCTGGGCCTATATCATCTATGAGATC---------------TTT------TTA---GGTGAAGCGAGTAAAGTTAGTGCCAGT------AAG---GCACCTCCAGCAGTA---CAA---TCA---GCA---TTT---AAG---ACTATG---CGTATAATTGTTACAGTT---------------------------------------------------------------GGTTGG---------GCAATTTACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LITVPLLMIEFYLILSA---V-TKVSV-GI------------FWR-LLVGTIVMLVGGYLGE---T------G--Y-----------M----------------------NL------TAA-FIIGMAGWAYIIYEI-----F--L-GEASKVSAS--K-APPAV-Q-S-A-F-K-TM-RIIVTV---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [unk-env2]_JX863193 [unk-env2] MALINA_OTU29_384_L_env_samples_JX863193 gi|425477336|gb|JX863193| Uncultured bacterium clone MALINA OTU29 384 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU29 384 L putative proteorhodopsin gene, partial cds JX863193 [[root proteorhodopsin/env cluster 2]] root proteorhodopsin env cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 08-juil-09 0m_depth Pacific Ocean marine 53.36 -159.29 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTTATTACTGTGCCGCTCCTTATGATAGAATTCTACCTCATCCTTTCGGCCGTTACGAAGGTGTCCGTTGGCATTTTCTGGCGACTACTCGTTGGCACAATCGTGATGTTGGTGGGCGGTTACCTTGGTGAAACAGGTTACATGAATCTCACCGCTGCCTTCATCATCGGAATGGCCGGCTGGGCCTATATCATCTATGAGATCTTTTTAGGTGAAGCGAGTAAAGTTAGTGCCAGTAAGGCACCTCCAGCAGTACAATCAGCATTTAAGACTATGCGTATAATTGTTACAGTT WLITVPLLMIEFYLILSAVTKVSVGIFWRLLVGTIVMLVGGYLGETGYMNLTAAFIIGMAGWAYIIYEIFLGEASKVSASKAPPAVQSAFKTMRIIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTTATTACTGTGCCGCTCCTTATGATAGAATTCTACCTCATCCTTTCGGCC---------GTT---ACGAAGGTGTCCGTT---GGCATT------------------------------------TTCTGGCGA---CTACTCGTTGGCACAATCGTGATGTTGGTGGGCGGTTACCTTGGTGAA---------ACA------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATCTC------------------ACCGCTGCC---TTCATCATCGGAATGGCCGGCTGGGCCTATATCATCTATGAGATC---------------TTT------TTA---GGTGAAGCGAGTAAAGTTAGTGCCAGT------AAG---GCACCTCCAGCAGTA---CAA---TCA---GCA---TTT---AAG---ACTATG---CGTATAATTGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFYLILSA---V-TKVSV-GI------------FWR-LLVGTIVMLVGGYLGE---T------G--Y-----------M----------------------NL------TAA-FIIGMAGWAYIIYEI-----F--L-GEASKVSAS--K-APPAV-Q-S-A-F-K-TM-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env2]_JX863192 [unk-env2] MALINA_OTU29_305_L_env_samples_JX863192 gi|425477334|gb|JX863192| Uncultured bacterium clone MALINA OTU29 305 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU29 305 L putative proteorhodopsin gene, partial cds JX863192 [[root proteorhodopsin/env cluster 2]] root proteorhodopsin env cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 11-juil-09 0m_depth Arctic Ocean marine 67.49 -168.12 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTCATTACTGTGCCGCTCCTTATGATAGAATTTTACCTCATCCTTTCAGCCGTTACGAAGGTGTCCGTTGGTATTTTCTGGCGACTCCTCGTTGGCACAATCGTCATGTTAGTGGGCGGTTACCTTGGTGAAACAGGTTACATGAACCTCACCGCTGCCTTCGTCATCGGAATGGCCGGCTGGGCCTATATCATCTATGAGATCTTTTTAGGTGAAGCGAGTAAAGTTAGTGCCAGTAAAGCACCTCCAGCAGTACAATCAGCATTTAAGACTATGCGTATAATTGTTACAGTG WLITVPLLMIEFYLILSAVTKVSVGIFWRLLVGTIVMLVGGYLGETGYMNLTAAFVIGMAGWAYIIYEIFLGEASKVSASKAPPAVQSAFKTMRIIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTCATTACTGTGCCGCTCCTTATGATAGAATTTTACCTCATCCTTTCAGCC---------GTT---ACGAAGGTGTCCGTT---GGTATT------------------------------------TTCTGGCGA---CTCCTCGTTGGCACAATCGTCATGTTAGTGGGCGGTTACCTTGGTGAA---------ACA------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACCTC------------------ACCGCTGCC---TTCGTCATCGGAATGGCCGGCTGGGCCTATATCATCTATGAGATC---------------TTT------TTA---GGTGAAGCGAGTAAAGTTAGTGCCAGT------AAA---GCACCTCCAGCAGTA---CAA---TCA---GCA---TTT---AAG---ACTATG---CGTATAATTGTTACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFYLILSA---V-TKVSV-GI------------FWR-LLVGTIVMLVGGYLGE---T------G--Y-----------M----------------------NL------TAA-FVIGMAGWAYIIYEI-----F--L-GEASKVSAS--K-APPAV-Q-S-A-F-K-TM-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env2]_JX863194 [unk-env2] MALINA_OTU29_390_L_env_samples_JX863194 gi|425477338|gb|JX863194| Uncultured bacterium clone MALINA OTU29 390 L putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU29 390 L putative proteorhodopsin gene, partial cds JX863194 [[root proteorhodopsin/env cluster 2]] root proteorhodopsin env cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 16Aug2009 0m_depth Arctic Ocean marine 69.51 -133.42 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGCTCATTACTGTGCCGCTCCTTATGATAGAATTTTACCTCATCCTTTCAGCCGTTACGAAGGTGTCCGTTGGTATTTTCTGGCGACTACTCGTTGGCACAATCGTCATGTTAGTGGGCGGTTACCTTGGTGAAACAGGTTACATGAACCTCACCGCTGCCTTCGTCCTCGGAATGGCCGGCTGGGCCTATATCATCTATGAGATCTTTTTAGGTGAAGCGAGTAAAGTTAGTGCCAGTAAAGCACCTCCAGCAGTACAATCAGCATTTAAGACTATGCGTATAATTGTTACAGTG WLITVPLLMIEFYLILSAVTKVSVGIFWRLLVGTIVMLVGGYLGETGYMNLTAAFVLGMAGWAYIIYEIFLGEASKVSASKAPPAVQSAFKTMRIIVTV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTCATTACTGTGCCGCTCCTTATGATAGAATTTTACCTCATCCTTTCAGCC---------GTT---ACGAAGGTGTCCGTT---GGTATT------------------------------------TTCTGGCGA---CTACTCGTTGGCACAATCGTCATGTTAGTGGGCGGTTACCTTGGTGAA---------ACA------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACCTC------------------ACCGCTGCC---TTCGTCCTCGGAATGGCCGGCTGGGCCTATATCATCTATGAGATC---------------TTT------TTA---GGTGAAGCGAGTAAAGTTAGTGCCAGT------AAA---GCACCTCCAGCAGTA---CAA---TCA---GCA---TTT---AAG---ACTATG---CGTATAATTGTTACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LITVPLLMIEFYLILSA---V-TKVSV-GI------------FWR-LLVGTIVMLVGGYLGE---T------G--Y-----------M----------------------NL------TAA-FVLGMAGWAYIIYEI-----F--L-GEASKVSAS--K-APPAV-Q-S-A-F-K-TM-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk]_DQ062250 [unk] MEDPR14B4_env_samples_DQ062250 gi|67483445|gb|DQ062250| Uncultured bacterium clone MEDPR14B4 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR14B4 proteorhodopsin gene, partial cds DQ062250 [[root proteorhodopsin]] root proteorhodopsin proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na AGGTACATAGATTGGCTAATTACAGTACCGCTGCAAATGGTTGAATTCTACTTCATTCTAGCAGCAGTCGCTGCTGTGAGTGCTGGCATCTTCTGGAGGCTTCTCATCGGTTCTTTGGTTATGCTTGTTGGTGGATACCTAGGTGAGGCTGGAATGATTAACATCTGGCTTGGGTTTGCTATTGGCATGGCCGGATGGTTCTACATTCTTTACGAAATCTTTGCTGGTGAAGCTGGCAAAGTTTCCGCAGAAAGCGCACCAGAGTCTGTACAAGCAGCTTTTGGAACGATGCGACTTATTGTAACGGTTGGTTGGGCCATCTATCCA RYIDWLITVPLQMVEFYFILAAVAAVSAGIFWRLLIGSLVMLVGGYLGEAGMINIWLGFAIGMAGWFYILYEIFAGEAGKVSAESAPESVQAAFGTMRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATAGATTGG------------------------CTAATTACAGTACCGCTGCAAATGGTTGAATTCTACTTCATTCTAGCAGCA---------GTC---GCTGCTGTGAGTGCT---GGCATC------------------------------------TTCTGGAGG---CTTCTCATCGGTTCTTTGGTTATGCTTGTTGGTGGATACCTAGGTGAG---------GCT------------------GGA------ATG---------------------------------ATT------------------------------------------------------------------AACATC------------------TGGCTTGGG---TTTGCTATTGGCATGGCCGGATGGTTCTACATTCTTTACGAAATC---------------TTT------GCT---GGTGAAGCTGGCAAAGTTTCCGCAGAA------AGC---GCACCAGAGTCTGTA---CAA---GCA---GCT---TTT---GGA---ACGATG---CGACTTATTGTAACGGTT---------------------------------------------------------------GGTTGG---------GCCATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYFILAA---V-AAVSA-GI------------FWR-LLIGSLVMLVGGYLGE---A------G--M-----------I----------------------NI------WLG-FAIGMAGWFYILYEI-----F--A-GEAGKVSAE--S-APESV-Q-A-A-F-G-TM-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk]_DQ062263 [unk] MEDPR46B10_env_samples_DQ062263 gi|67483471|gb|DQ062263| Uncultured bacterium clone MEDPR46B10 proteorhodopsin gene, partial cds Uncultured bacterium clone MEDPR46B10 proteorhodopsin gene, partial cds DQ062263 [[root proteorhodopsin]] root proteorhodopsin proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 11-juil-05 August 2003 12_m_water_on_a_transect_from_Haifa_to_Cyprus_[33deg25N/33deg56E_to_32deg54N/34deg44E] Mediterranean Sea marine 33.4167 33.9333 New insights into metabolic properties of marine bacteria encoding proteorhodopsins Sabehi,G., Loy,A., Jung,K.H., Partha,R., Spudich,J.L., Isaacson,T., Hirschberg,J., Wagner,M. and Beja,O. PLoS Biol. 3 (8), E273 (2005) 16008504 #na AGGTACATTGATTGGCTAATTACAGTACCGCTGCAAATGGTTGAATTCTACTTCATTCTAGCAGCAGTCGCTGCTGTGAGTGCTGGCATCTTCTGGAGGCTTCTCATCGGTTCTTTGGTTATGCTTGTTGGTGGATACCTAGGTGAGGCTGGAATGATTAACATCTGGCTTGGGTTTGCTATTGGCATGGCCGGATGGTTCTACATTCTTTACGAAATCTTTGCTGGTGAAGCTGGCAAAGTTTCTGCAGAAAGCGCACCAGAGTCTGTACAAGCAGCTTTTGGAACGATGCGACTTATTGTAACGGTTGGGTGGGCCATATATCCA RYIDWLITVPLQMVEFYFILAAVAAVSAGIFWRLLIGSLVMLVGGYLGEAGMINIWLGFAIGMAGWFYILYEIFAGEAGKVSAESAPESVQAAFGTMRLIVTVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATTGATTGG------------------------CTAATTACAGTACCGCTGCAAATGGTTGAATTCTACTTCATTCTAGCAGCA---------GTC---GCTGCTGTGAGTGCT---GGCATC------------------------------------TTCTGGAGG---CTTCTCATCGGTTCTTTGGTTATGCTTGTTGGTGGATACCTAGGTGAG---------GCT------------------GGA------ATG---------------------------------ATT------------------------------------------------------------------AACATC------------------TGGCTTGGG---TTTGCTATTGGCATGGCCGGATGGTTCTACATTCTTTACGAAATC---------------TTT------GCT---GGTGAAGCTGGCAAAGTTTCTGCAGAA------AGC---GCACCAGAGTCTGTA---CAA---GCA---GCT---TTT---GGA---ACGATG---CGACTTATTGTAACGGTT---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LITVPLQMVEFYFILAA---V-AAVSA-GI------------FWR-LLIGSLVMLVGGYLGE---A------G--M-----------I----------------------NI------WLG-FAIGMAGWFYILYEI-----F--A-GEAGKVSAE--S-APESV-Q-A-A-F-G-TM-RLIVTV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk]_JX863319 [unk] MALINA_OTU46_188_Q_env_samples_JX863319 gi|425477588|gb|JX863319| Uncultured bacterium clone MALINA OTU46 188 Q putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU46 188 Q putative proteorhodopsin mRNA, partial cds JX863319 [[root proteorhodopsin]] root proteorhodopsin proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 08Aug2009 3m_depth Arctic Ocean marine 70.8 -133.73 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGGCAATCACTGTTCCGTTGCAAATGGTGGAGTTCTACTTCATCCTCTCTGCCGTACAGCCCAGCATCGGTGGCGGCATGTTCTGGCGCTTGTTGCTTGGCACGGTCGGTATGCTTGCTTTCGGCTACGCGGGTGAAGCTGGTTTCATGAATGTTTGGGTAGGCTTCGTTATTGGCATGGCTGGATGGTTGTTCATCTTGTACGAGATCTTCATGGGCGAGGCTGGTACCGTTGCCGCAAGTAGCGATTCGGTCAGCGAGCATGTCAAGAAGTCGTTCAACTTCATGCGCATCATCGTTACCGCA WAITVPLQMVEFYFILSAVQPSIGGGMFWRLLLGTVGMLAFGYAGEAGFMNVWVGFVIGMAGWLFILYEIFMGEAGTVAASSDSVSEHVKKSFNFMRIIVTA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------GCAATCACTGTTCCGTTGCAAATGGTGGAGTTCTACTTCATCCTCTCTGCC---------GTACAGCCCAGCATCGGTGGC---GGCATG------------------------------------TTCTGGCGC---TTGTTGCTTGGCACGGTCGGTATGCTTGCTTTCGGCTACGCGGGTGAA---------GCT------------------GGT------TTC---------------------------------ATG------------------------------------------------------------------AATGTT------------------TGGGTAGGC---TTCGTTATTGGCATGGCTGGATGGTTGTTCATCTTGTACGAGATC---------------TTC------ATG---GGCGAGGCTGGTACCGTTGCCGCAAGTAGCGATTCG---GTCAGCGAGCATGTC---AAG---AAG---TCG---TTC---AAC---TTCATG---CGCATCATCGTTACCGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------AITVPLQMVEFYFILSA---VQPSIGG-GM------------FWR-LLLGTVGMLAFGYAGE---A------G--F-----------M----------------------NV------WVG-FVIGMAGWLFILYEI-----F--M-GEAGTVAASSDS-VSEHV-K-K-S-F-N-FM-RIIVTA-------------------------------------------------------------------------------------------------------------------------------- [unk]_GU338844 [unk] MCM_C_4B25_env_samples_GU338844 gi|283574558|gb|GU338844| Uncultured Antarctic sea ice bacterium clone MCM C 4B25 putative proteorhodopsin pseudogene, partial sequence Uncultured Antarctic sea ice bacterium clone MCM C 4B25 putative proteorhodopsin pseudogene, partial sequence GU338844 [[root proteorhodopsin]] root proteorhodopsin proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue (Q105) [Bacteria/environmental samples] taxon:219048 genomic_DNA other 27Aug-2010 #na bottom_sea_ice Antarctic Ocean marine -77.850000 166.666667 Proteorhodopsinbearing bacteria in Antarctic sea ice Koh,E.Y., AtamnaIsmaeel,N., Martin,A., Cowie,R.O., Beja,O., Davy,S.K., Maas,E.W. and Ryan,K.G. Appl. Environ. Microbiol. 76 (17), 59185925 (2010) 20601510 #na AGTTACATTGACTGGAGCATCACCGTCCCGTTGCAGATGATTGAGTTCAACCTCATCTTGAAGGCAGCCAGGAAACCTGTCGGTTCCATGATGTTCTGGAGGCTCCTGGGCGGCACTGTGGCCATGCTTGGTTTCGGGTACACTGGTAAGGTCGGTGCCATCAATGCTTGGATTGGCTTTGCTATTGGCATGGCGGGGTGGGCCTTCATTCTCTTCGAGGTCTTCGCAGGCGAGGCCGGCAACGTGTCGTCAGACTGCTCAGACGCCGTCAGGACGTCTTTCAACAACATGCGCATTATCGTCTCTGTTGGTTGGGCTATTTATCCAAGCTTGCGCGCAAGC SYIDWSITVPLQMIEFNLILKAARKPVGSMMFWRLLGGTVAMLGFGYTGKVGAINAWIGFAIGMAGWAFILFEVFAGEAGNVSSDCSDAVRTSFNNMRIIVSVGWAIYPSLRAS ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTTACATTGACTGG------------------------AGCATCACCGTCCCGTTGCAGATGATTGAGTTCAACCTCATCTTGAAGGCA---------GCCAGGAAACCTGTCGGTTCC---ATGATG------------------------------------TTCTGGAGG---CTCCTGGGCGGCACTGTGGCCATGCTTGGTTTCGGGTACACTGGTAAG---------GTC------------------GGT------GCC---------------------------------ATC------------------------------------------------------------------AATGCT------------------TGGATTGGC---TTTGCTATTGGCATGGCGGGGTGGGCCTTCATTCTCTTCGAGGTC---------------TTC------GCA---GGCGAGGCCGGCAACGTGTCGTCAGAC------------TGCTCAGACGCCGTC---AGG---ACG---TCT---TTC---AAC---AACATG---CGCATTATCGTCTCTGTT---------------------------------------------------------------GGTTGG---------GCTATTTATCCAAGCTTGCGCGCAAGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------SITVPLQMIEFNLILKA---ARKPVGS-MM------------FWR-LLGGTVAMLGFGYTGK---V------G--A-----------I----------------------NA------WIG-FAIGMAGWAFILFEV-----F--A-GEAGNVSSD----CSDAV-R-T-S-F-N-NM-RIIVSV---------------------GW---AIYPSLRAS--------------------------------------------------------------------------------------------- [unk-env1-c]_FJ560825 [unk-env1-c] HEL106_env_samples_FJ560825 gi|223868797|gb|FJ560825| Uncultured microorganism clone HEL106 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL106 putative proteorhodopsin gene, partial cds FJ560825 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTGCCATTAATGTGTGTAGAGTTTTATTTATTAACCAAAGCTGCTGGAGCAACTAGATCGCTATTGTGGAAACTAATTATAGCTTCAACTTGGATGTTAGTTTGTGGATACATTGGTGAAGCTTTCTCTGATGGAACTACTGGGCATTCTGTTCAATGGGGTGTGTTATCAACTTTAGGATACATTTACATATTACACGCTGTATGGTTAGGTGAAGTAGCACAACTTGCAGATGCAAGTAAGTCAGATGTAGTAAAAAGAGGAGTTAGAACACTTGCATGG TVPLMCVEFYLLTKAAGATRSLLWKLIIASTWMLVCGYIGEAFSDGTTGHSVQWGVLSTLGYIYILHAVWLGEVAQLADASKSDVVKRGVRTLAW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTGCCATTAATGTGTGTAGAGTTTTATTTATTAACCAAAGCT---------GCT------GGAGCAACTAGA---TCGCTA------------------------------------TTGTGGAAA---CTAATTATAGCTTCAACTTGGATGTTAGTTTGTGGATACATTGGTGAA---------GCT------------------TTC------TCTGAT---------------------------------GGA------------------ACT---------ACT---------------------------GGGCATTCT------------------GTTCAATGG---GGTGTGTTATCAACTTTAGGATACATTTACATATTACACGCTGTA---------------TGG------TTA---GGTGAAGTAGCACAACTTGCAGATGCA------AGT---AAGTCAGATGTAGTA---AAA---AGA---GGA---GTT---AGA---ACACTT---GCATGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLMCVEFYLLTKA---A--GATR-SL------------LWK-LIIASTWMLVCGYIGE---A------F--SD-----------G------T---T---------GHS------VQW-GVLSTLGYIYILHAV-----W--L-GEVAQLADA--S-KSDVV-K-R-G-V-R-TL-AW------------------------------------------------------------------------------------------------------------------------------------ [unk-env1-c]_FJ560828 [unk-env1-c] HEL112_env_samples_FJ560828 gi|223868803|gb|FJ560828| Uncultured microorganism clone HEL112 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL112 putative proteorhodopsin gene, partial cds FJ560828 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACAGTGCCATTAATGTGTGTAGAGTTTTATTTATTAACCAAAGCTGCTGGAGCAACTAGATCGCTATTGTGGAAACTAATTATAGCTTCAACTTGGATGTTAGTTTGTGGATACATTGGTGAAGCTTTCTCTGATGGAACTACTGGGCATTCTGTTCAATGGGGTGTGTTATCAACTTTAGGATACATTTACATATTACACGCTGTATGGTTAGGTGAAGTAGCACAACTTGCAGATGCAAGTAAGTCAGATGTAGTAAAAAGAGGAGTTAGAACACTTGCATGG TVPLMCVEFYLLTKAAGATRSLLWKLIIASTWMLVCGYIGEAFSDGTTGHSVQWGVLSTLGYIYILHAVWLGEVAQLADASKSDVVKRGVRTLAW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTGCCATTAATGTGTGTAGAGTTTTATTTATTAACCAAAGCT---------GCT------GGAGCAACTAGA---TCGCTA------------------------------------TTGTGGAAA---CTAATTATAGCTTCAACTTGGATGTTAGTTTGTGGATACATTGGTGAA---------GCT------------------TTC------TCTGAT---------------------------------GGA------------------ACT---------ACT---------------------------GGGCATTCT------------------GTTCAATGG---GGTGTGTTATCAACTTTAGGATACATTTACATATTACACGCTGTA---------------TGG------TTA---GGTGAAGTAGCACAACTTGCAGATGCA------AGT---AAGTCAGATGTAGTA---AAA---AGA---GGA---GTT---AGA---ACACTT---GCATGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLMCVEFYLLTKA---A--GATR-SL------------LWK-LIIASTWMLVCGYIGE---A------F--SD-----------G------T---T---------GHS------VQW-GVLSTLGYIYILHAV-----W--L-GEVAQLADA--S-KSDVV-K-R-G-V-R-TL-AW------------------------------------------------------------------------------------------------------------------------------------ [unk-env1-c]_FJ560814 [unk-env1-c] HEL94_env_samples_FJ560814 gi|223868775|gb|FJ560814| Uncultured microorganism clone HEL94 putative proteorhodopsin gene, partial cds Uncultured microorganism clone HEL94 putative proteorhodopsin gene, partial cds FJ560814 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 10-May-2010 01-sept-06 North_Sea North Sea marine 54.11 7.54 Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsinproducing microbial community in the North Sea Riedel,T., Tomasch,J., Buchholz,I., Jacobs,J., Kollenberg,M., Gerdts,G., Wichels,A., Brinkhoff,T., Cypionka,H. and WagnerDobler,I. Appl. Environ. Microbiol. 76 (10), 31873197 (2010) 20305030 #na ACTGTGCCATTAATGTGTGTAGAGTTTTATTTATTAACCAAAGCTGCTGGAGCAACTAGATCGCTATTGTGGAAACTAATTATAGCTTCAACTTGGATGTTAGTTTGTGGATACATTGGTGAAGCTTTCTCTGATGGAACTACTGGGCATTCTGTTCAATGGGGTGTGTTATCAACTTTAGGATACATTTACATATTACACGCTGTATGGTTAGGTGAAGTAGCACAACTTGCAGATGCAAGTAAGTCAGATGTAGTAAAAAGAGGAGTTAGAACACTTGCATGG TVPLMCVEFYLLTKAAGATRSLLWKLIIASTWMLVCGYIGEAFSDGTTGHSVQWGVLSTLGYIYILHAVWLGEVAQLADASKSDVVKRGVRTLAW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTGCCATTAATGTGTGTAGAGTTTTATTTATTAACCAAAGCT---------GCT------GGAGCAACTAGA---TCGCTA------------------------------------TTGTGGAAA---CTAATTATAGCTTCAACTTGGATGTTAGTTTGTGGATACATTGGTGAA---------GCT------------------TTC------TCTGAT---------------------------------GGA------------------ACT---------ACT---------------------------GGGCATTCT------------------GTTCAATGG---GGTGTGTTATCAACTTTAGGATACATTTACATATTACACGCTGTA---------------TGG------TTA---GGTGAAGTAGCACAACTTGCAGATGCA------AGT---AAGTCAGATGTAGTA---AAA---AGA---GGA---GTT---AGA---ACACTT---GCATGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLMCVEFYLLTKA---A--GATR-SL------------LWK-LIIASTWMLVCGYIGE---A------F--SD-----------G------T---T---------GHS------VQW-GVLSTLGYIYILHAV-----W--L-GEVAQLADA--S-KSDVV-K-R-G-V-R-TL-AW------------------------------------------------------------------------------------------------------------------------------------ [unk-env1-c]_FJ862959 [unk-env1-c] clone_16_FJ862959 gi|226897318|gb|FJ862959| Uncultured bacterium clone 16 putative proteorhodopsin mRNA, partial cds. Uncultured bacterium clone 16 putative proteorhodopsin mRNA, partial cds. FJ862959 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 mRNA other 07-DEC-2009 #na coastal seawater Atlantic Ocean marine 38.8489 -75.1076 Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTCGACTGGACATTAACTGTACCTTTAATGTGTGTTGAGTTTTATTTATTAACAAAGCCAGCAGGAGCAAAAACAAGTCTTCTTTGGAAATTAATCGGTGCTTCAGTATTAATGTTAGTAGCAGGATACATCGGAGAGGCATTCAATCCTGAAGGTGGTAGCACATCACACAGTGTAATCTGGGGTGTAATTTCAACAATCGGTTATATTTATATTCTTTATGCTGCATGGGCTGGAGAGGTTAAGCAATTGGCTGCAAAATCAGACAACCCTCAAGTTGCTAAAGGTATCAATGTAATGGCTTGGTTCGTATTAGTAGGATGGGCTATCTACGCTCGATC VDWTLTVPLMCVEFYLLTKPAGAKTSLLWKLIGASVLMLVAGYIGEAFNPEGGSTSHSVIWGVISTIGYIYILYAAWAGEVKQLAAKSDNPQVAKGINVMAWFVLVGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCGACTGG------------------------ACATTAACTGTACCTTTAATGTGTGTTGAGTTTTATTTATTAACAAAGCCA---------GCA------GGAGCAAAAACA---AGTCTT------------------------------------CTTTGGAAA---TTAATCGGTGCTTCAGTATTAATGTTAGTAGCAGGATACATCGGAGAG---------GCA------------------TTC------AATCCT------------------------GAAGGT---GGT------------------AGC---------ACA---------------------------TCACACAGT------------------GTAATCTGG---GGTGTAATTTCAACAATCGGTTATATTTATATTCTTTATGCTGCA---------------TGG------GCT---GGAGAGGTTAAGCAATTGGCTGCAAAA------TCA---GACAACCCTCAAGTT---GCT---AAA---GGT---ATC---AAT---GTAATG---GCTTGGTTCGTATTAGTA---------------------------------------------------------------GGATGG---------GCTATCTACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------TLTVPLMCVEFYLLTKP---A--GAKT-SL------------LWK-LIGASVLMLVAGYIGE---A------F--NP--------EG-G------S---T---------SHS------VIW-GVISTIGYIYILYAA-----W--A-GEVKQLAAK--S-DNPQV-A-K-G-I-N-VM-AWFVLV---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [unk-env1-c]_FJ862965 [unk-env1-c] clone_22_FJ862965 gi|226897330|gb|FJ862965| Uncultured bacterium clone 22 putative proteorhodopsin mRNA, partial cds. Uncultured bacterium clone 22 putative proteorhodopsin mRNA, partial cds. FJ862965 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 mRNA other 07-DEC-2009 #na coastal seawater Atlantic Ocean marine 38.8489 -75.1076 Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTCGACTGGACATTAACTGTACCTTTAATGTGTGTTGAGTTTTATTTATTAACAAAGCCAGCAGGAGCAAAAACAAGTCTTCTTTGGAAATTAATCGGTGCTTCAGTATTAATGTTAGTAGCAGGATACATCGGAGAGGCATTCAATCCTGAAGGTGGTAGCACATCACACAGTGTAATCTGGGGTGTAATTTCAACAATCGGTTATATTTATATTCTTTATGCTGCATGGGCTGGAGAGGTTAAGCAATTGGCTGCAAAATCAGACAACCCTCAAGTTGCTAAAGGTATCAATGTAATGGCTTGGTTCGTATTAGTAGGATGGGCTATCTACGCTCGATC VDWTLTVPLMCVEFYLLTKPAGAKTSLLWKLIGASVLMLVAGYIGEAFNPEGGSTSHSVIWGVISTIGYIYILYAAWAGEVKQLAAKSDNPQVAKGINVMAWFVLVGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCGACTGG------------------------ACATTAACTGTACCTTTAATGTGTGTTGAGTTTTATTTATTAACAAAGCCA---------GCA------GGAGCAAAAACA---AGTCTT------------------------------------CTTTGGAAA---TTAATCGGTGCTTCAGTATTAATGTTAGTAGCAGGATACATCGGAGAG---------GCA------------------TTC------AATCCT------------------------GAAGGT---GGT------------------AGC---------ACA---------------------------TCACACAGT------------------GTAATCTGG---GGTGTAATTTCAACAATCGGTTATATTTATATTCTTTATGCTGCA---------------TGG------GCT---GGAGAGGTTAAGCAATTGGCTGCAAAA------TCA---GACAACCCTCAAGTT---GCT---AAA---GGT---ATC---AAT---GTAATG---GCTTGGTTCGTATTAGTA---------------------------------------------------------------GGATGG---------GCTATCTACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------TLTVPLMCVEFYLLTKP---A--GAKT-SL------------LWK-LIGASVLMLVAGYIGE---A------F--NP--------EG-G------S---T---------SHS------VIW-GVISTIGYIYILYAA-----W--A-GEVKQLAAK--S-DNPQV-A-K-G-I-N-VM-AWFVLV---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [unk-env1-c]_FJ862962 [unk-env1-c] clone_19_FJ862962 gi|226897324|gb|FJ862962| Uncultured bacterium clone 19 putative proteorhodopsin mRNA, partial cds. Uncultured bacterium clone 19 putative proteorhodopsin mRNA, partial cds. FJ862962 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 mRNA other 07-DEC-2009 #na coastal seawater Atlantic Ocean marine 38.8489 -75.1076 Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTCGACTGGACATTAACTGTACCTTTAATGTGTGTTGAGTTTTATTTATTAACAAAGCCAGCAGGAGCAAAAACAAGTCTTCTTTGGAAATTAATCGGTGCTTCAGTATTAATGTTAGTAGCAGGATACATCGGAGAGGCATTCAATCCTGAAGGTGGTAGCACATCACACAGTGTAATCTGGGGTGTAATTTCAACAATCGGTTACATTTATATTCTTTATGCTGCATGGGCTGGAGAGGTTAAGCAATTAGCTGCAAAATCAGACAACCCTCAAGTTGCTAAAGGTATCAATGTAATGGCTTGGTTCGTATTAGTAGGATGGGCCATATACGCTCGATC VDWTLTVPLMCVEFYLLTKPAGAKTSLLWKLIGASVLMLVAGYIGEAFNPEGGSTSHSVIWGVISTIGYIYILYAAWAGEVKQLAAKSDNPQVAKGINVMAWFVLVGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCGACTGG------------------------ACATTAACTGTACCTTTAATGTGTGTTGAGTTTTATTTATTAACAAAGCCA---------GCA------GGAGCAAAAACA---AGTCTT------------------------------------CTTTGGAAA---TTAATCGGTGCTTCAGTATTAATGTTAGTAGCAGGATACATCGGAGAG---------GCA------------------TTC------AATCCT------------------------GAAGGT---GGT------------------AGC---------ACA---------------------------TCACACAGT------------------GTAATCTGG---GGTGTAATTTCAACAATCGGTTACATTTATATTCTTTATGCTGCA---------------TGG------GCT---GGAGAGGTTAAGCAATTAGCTGCAAAA------TCA---GACAACCCTCAAGTT---GCT---AAA---GGT---ATC---AAT---GTAATG---GCTTGGTTCGTATTAGTA---------------------------------------------------------------GGATGG---------GCCATATACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------TLTVPLMCVEFYLLTKP---A--GAKT-SL------------LWK-LIGASVLMLVAGYIGE---A------F--NP--------EG-G------S---T---------SHS------VIW-GVISTIGYIYILYAA-----W--A-GEVKQLAAK--S-DNPQV-A-K-G-I-N-VM-AWFVLV---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [unk-env1-c]_FJ862978 [unk-env1-c] clone_39_FJ862978 gi|226897356|gb|FJ862978| Uncultured bacterium clone 39 putative proteorhodopsin mRNA, partial cds. Uncultured bacterium clone 39 putative proteorhodopsin mRNA, partial cds. FJ862978 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 mRNA other 07-DEC-2009 #na coastal seawater Atlantic Ocean marine 38.8489 -75.1076 Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTTGATTGGACATTAACTGTACCTTTAATGTGTGTTGAGTTTTATTTATTAACAAAGCCAGCAGGAGCAAAAACAAGTCTTCTTTGGAAATTAATCGGTGCTTCAGTATTAATGTTAGTAGCAGGATACATCGGAGAGGCATTCAATCCTGAAGGTGGTAGCACATCACACAGTGTAATCTGGGGTGTAATTTCAACAATCGGTTATATTTATATTCTTTATGCTGCATGGGCTGGAGAGGTTAAGCAATTGGCTGCAAAATCAGACAACCCTCAAGTTGCTAAAGGTATCAATGTAATAGCTTGGTTAGTATTAGTAGGATGGGCCATATATGCTCGATC VDWTLTVPLMCVEFYLLTKPAGAKTSLLWKLIGASVLMLVAGYIGEAFNPEGGSTSHSVIWGVISTIGYIYILYAAWAGEVKQLAAKSDNPQVAKGINVIAWLVLVGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGATTGG------------------------ACATTAACTGTACCTTTAATGTGTGTTGAGTTTTATTTATTAACAAAGCCA---------GCA------GGAGCAAAAACA---AGTCTT------------------------------------CTTTGGAAA---TTAATCGGTGCTTCAGTATTAATGTTAGTAGCAGGATACATCGGAGAG---------GCA------------------TTC------AATCCT------------------------GAAGGT---GGT------------------AGC---------ACA---------------------------TCACACAGT------------------GTAATCTGG---GGTGTAATTTCAACAATCGGTTATATTTATATTCTTTATGCTGCA---------------TGG------GCT---GGAGAGGTTAAGCAATTGGCTGCAAAA------TCA---GACAACCCTCAAGTT---GCT---AAA---GGT---ATC---AAT---GTAATA---GCTTGGTTAGTATTAGTA---------------------------------------------------------------GGATGG---------GCCATATATGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------TLTVPLMCVEFYLLTKP---A--GAKT-SL------------LWK-LIGASVLMLVAGYIGE---A------F--NP--------EG-G------S---T---------SHS------VIW-GVISTIGYIYILYAA-----W--A-GEVKQLAAK--S-DNPQV-A-K-G-I-N-VI-AWLVLV---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [unk-env1-c]_FJ862968 [unk-env1-c] clone_26_FJ862968 gi|226897336|gb|FJ862968| Uncultured bacterium clone 26 putative proteorhodopsin mRNA, partial cds. Uncultured bacterium clone 26 putative proteorhodopsin mRNA, partial cds. FJ862968 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 mRNA other 07-DEC-2009 #na coastal seawater Atlantic Ocean marine 38.8489 -75.1076 Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTAGACTGGACATTAACTGTACCTTTAATGTGTGTTGAGTTTTATTTATTAACAAAGCCAGCAGGAGCAAAAACAAGTCTTCTTTGGAAATTAATCGGTGCTTCAGTATTAATGTTAGTAGCAGGATACATCGGAGAGGCATTCAATCCTGAAGGTGGTAGCACATCACACAGTGTAATCTGGGGTGTAATTTCAACAATCGGTTATATTTATATTCTTTATGCTGCATGGGCTGGAGAGGTTAAGCAATTAGCTGCAAAATCAGACAACCCTCAAGTTGCTAAAGGTATCAATGTAATGGCTTGGTTCGTATTAGTAGGCTGGGCTATATACGCTCGATC VDWTLTVPLMCVEFYLLTKPAGAKTSLLWKLIGASVLMLVAGYIGEAFNPEGGSTSHSVIWGVISTIGYIYILYAAWAGEVKQLAAKSDNPQVAKGINVMAWFVLVGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGACTGG------------------------ACATTAACTGTACCTTTAATGTGTGTTGAGTTTTATTTATTAACAAAGCCA---------GCA------GGAGCAAAAACA---AGTCTT------------------------------------CTTTGGAAA---TTAATCGGTGCTTCAGTATTAATGTTAGTAGCAGGATACATCGGAGAG---------GCA------------------TTC------AATCCT------------------------GAAGGT---GGT------------------AGC---------ACA---------------------------TCACACAGT------------------GTAATCTGG---GGTGTAATTTCAACAATCGGTTATATTTATATTCTTTATGCTGCA---------------TGG------GCT---GGAGAGGTTAAGCAATTAGCTGCAAAA------TCA---GACAACCCTCAAGTT---GCT---AAA---GGT---ATC---AAT---GTAATG---GCTTGGTTCGTATTAGTA---------------------------------------------------------------GGCTGG---------GCTATATACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------TLTVPLMCVEFYLLTKP---A--GAKT-SL------------LWK-LIGASVLMLVAGYIGE---A------F--NP--------EG-G------S---T---------SHS------VIW-GVISTIGYIYILYAA-----W--A-GEVKQLAAK--S-DNPQV-A-K-G-I-N-VM-AWFVLV---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [unk-env1-c]_FJ862979 [unk-env1-c] clone_40_FJ862979 gi|226897358|gb|FJ862979| Uncultured bacterium clone 40 putative proteorhodopsin mRNA, partial cds. Uncultured bacterium clone 40 putative proteorhodopsin mRNA, partial cds. FJ862979 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 mRNA other 07-DEC-2009 #na coastal seawater Atlantic Ocean marine 38.8489 -75.1076 Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTTGACTGGACATTAACTGTACCTTTAATGTGTGTTGAGTTTTATTTATTAACAAAGCCAGCAGGAGCAAAAACAAGTCTTCTTTGGAAATTAATCGGTGCTTCAGTATTAATGTTAGTAGCAGGATACATCGGAGAGGTATTCAATCCTGAAGGTGGTAGCACATCACACAGTGTAATCTGGGGTGTAATTTCAACAGTCGGTTATATTTATATTCTTTATGCTGCATGGGCTGGAGAGGTTAAGCAATTAGCTGCAAAATCAGACAACCCTCAAGTTGCTAAAGGTATCAATGTAATGGCTTGGTTCGTATTAGTAGGCTGGGCCATATACGCTCGATC VDWTLTVPLMCVEFYLLTKPAGAKTSLLWKLIGASVLMLVAGYIGEVFNPEGGSTSHSVIWGVISTVGYIYILYAAWAGEVKQLAAKSDNPQVAKGINVMAWFVLVGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGACTGG------------------------ACATTAACTGTACCTTTAATGTGTGTTGAGTTTTATTTATTAACAAAGCCA---------GCA------GGAGCAAAAACA---AGTCTT------------------------------------CTTTGGAAA---TTAATCGGTGCTTCAGTATTAATGTTAGTAGCAGGATACATCGGAGAG---------GTA------------------TTC------AATCCT------------------------GAAGGT---GGT------------------AGC---------ACA---------------------------TCACACAGT------------------GTAATCTGG---GGTGTAATTTCAACAGTCGGTTATATTTATATTCTTTATGCTGCA---------------TGG------GCT---GGAGAGGTTAAGCAATTAGCTGCAAAA------TCA---GACAACCCTCAAGTT---GCT---AAA---GGT---ATC---AAT---GTAATG---GCTTGGTTCGTATTAGTA---------------------------------------------------------------GGCTGG---------GCCATATACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------TLTVPLMCVEFYLLTKP---A--GAKT-SL------------LWK-LIGASVLMLVAGYIGE---V------F--NP--------EG-G------S---T---------SHS------VIW-GVISTVGYIYILYAA-----W--A-GEVKQLAAK--S-DNPQV-A-K-G-I-N-VM-AWFVLV---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [unk-env1-c]_FJ862975 [unk-env1-c] clone_35_FJ862975 gi|226897350|gb|FJ862975| Uncultured bacterium clone 35 putative proteorhodopsin mRNA, partial cds. Uncultured bacterium clone 35 putative proteorhodopsin mRNA, partial cds. FJ862975 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 mRNA other 07-DEC-2009 #na coastal seawater Atlantic Ocean marine 38.8489 -75.1076 Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTTGACTGGACATTAACTGTACCTTTAATGTGTGTTGAGTTTTATTTATTAACAAAGCCAGCAGGAGCAAAAACAAGTCTTCTTTGGAAATTAATCGGTGCTTCAGTATTAATGTTAGTAGCAGGATACATCGGAGAGGCATTCAATCCTGAAGGTGGTAGCGCACCACACAGTGTAATTTGGGGTGTAATTTCAACAATCGGTTATATTTATATTCTTTATGCTGCATGGGCTGGAGAGGTTAAGCAATTAGCTGCAAAATCAGACAACCCTCAAGTTGCTAAAGGTATCAATGTAATGGCTTGGTTCGTATTAGTAGGATGGGCAATCTACGCTCGAT VDWTLTVPLMCVEFYLLTKPAGAKTSLLWKLIGASVLMLVAGYIGEAFNPEGGSAPHSVIWGVISTIGYIYILYAAWAGEVKQLAAKSDNPQVAKGINVMAWFVLVGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGACTGG------------------------ACATTAACTGTACCTTTAATGTGTGTTGAGTTTTATTTATTAACAAAGCCA---------GCA------GGAGCAAAAACA---AGTCTT------------------------------------CTTTGGAAA---TTAATCGGTGCTTCAGTATTAATGTTAGTAGCAGGATACATCGGAGAG---------GCA------------------TTC------AATCCT------------------------GAAGGT---GGT------------------AGC---------GCA---------------------------CCACACAGT------------------GTAATTTGG---GGTGTAATTTCAACAATCGGTTATATTTATATTCTTTATGCTGCA---------------TGG------GCT---GGAGAGGTTAAGCAATTAGCTGCAAAA------TCA---GACAACCCTCAAGTT---GCT---AAA---GGT---ATC---AAT---GTAATG---GCTTGGTTCGTATTAGTA---------------------------------------------------------------GGATGG---------GCAATCTACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------TLTVPLMCVEFYLLTKP---A--GAKT-SL------------LWK-LIGASVLMLVAGYIGE---A------F--NP--------EG-G------S---A---------PHS------VIW-GVISTIGYIYILYAA-----W--A-GEVKQLAAK--S-DNPQV-A-K-G-I-N-VM-AWFVLV---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [unk-env1-c]_FJ862964 [unk-env1-c] clone_21_FJ862964 gi|226897328|gb|FJ862964| Uncultured bacterium clone 21 putative proteorhodopsin mRNA, partial cds. Uncultured bacterium clone 21 putative proteorhodopsin mRNA, partial cds. FJ862964 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 mRNA other 07-DEC-2009 #na coastal seawater Atlantic Ocean marine 38.8489 -75.1076 Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na ATCGACTGGACATTAACTGTACCTTTAATGTGTGTTGAGTTTTATTTATTAACAAAGCCAGCAGAAGCCAAAACAAGTCTTCTTTGGAAATTAATCGGTGCTTCAGTATTAATGATAGTAGCAGGTTACATCGGAGAGGCATTCAATCCTGAAGGTGGTAGCACATCACACAGTGTAATTTGGAGTGTAATTTCAACAATCGGTTATATTTATATTCTTTATGCTGCCTGGACTGGAGAGGTTAAGCAATTAGCTGCCAAATCAGACAACCCTCACGTTGCTAAAGGTATCAATGTAATGGCTTGGTTCGTATTAGTAGGGTGGGCGATCTACGCTCGATC IDWTLTVPLMCVEFYLLTKPAEAKTSLLWKLIGASVLMIVAGYIGEAFNPEGGSTSHSVIWSVISTIGYIYILYAAWTGEVKQLAAKSDNPHVAKGINVMAWFVLVGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCGACTGG------------------------ACATTAACTGTACCTTTAATGTGTGTTGAGTTTTATTTATTAACAAAGCCA---------GCA------GAAGCCAAAACA---AGTCTT------------------------------------CTTTGGAAA---TTAATCGGTGCTTCAGTATTAATGATAGTAGCAGGTTACATCGGAGAG---------GCA------------------TTC------AATCCT------------------------GAAGGT---GGT------------------AGC---------ACA---------------------------TCACACAGT------------------GTAATTTGG---AGTGTAATTTCAACAATCGGTTATATTTATATTCTTTATGCTGCC---------------TGG------ACT---GGAGAGGTTAAGCAATTAGCTGCCAAA------TCA---GACAACCCTCACGTT---GCT---AAA---GGT---ATC---AAT---GTAATG---GCTTGGTTCGTATTAGTA---------------------------------------------------------------GGGTGG---------GCGATCTACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDW--------TLTVPLMCVEFYLLTKP---A--EAKT-SL------------LWK-LIGASVLMIVAGYIGE---A------F--NP--------EG-G------S---T---------SHS------VIW-SVISTIGYIYILYAA-----W--T-GEVKQLAAK--S-DNPHV-A-K-G-I-N-VM-AWFVLV---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [unk-env1-c]_FJ862956 [unk-env1-c] clone_13_FJ862956 gi|226897312|gb|FJ862956| Uncultured bacterium clone 13 putative proteorhodopsin mRNA, partial cds. Uncultured bacterium clone 13 putative proteorhodopsin mRNA, partial cds. FJ862956 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 mRNA other 07-DEC-2009 #na coastal seawater Atlantic Ocean marine 38.8489 -75.1076 Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na ATTGATTGGACATTAACTGTACCTTTAATGTGTGTTGAGTTTTATTTATTAACAAAGCCAGCAGGAGCAAAAACAAGTCTTCTTTGGAAATTAATCGGTGCTTCAGTATTAATGTTAGTAGCAGGATACATCGGAGAGGCATTCAATCCTGAAGGTGGTAGCACATCACACAGTGTAATTTGGGGTGTAATTTCAACAATCGGTTATATTTATATTCTTTATGCTGCATGGGCTGGAGAGGTTAAGCAATTAGCTGCAAAATCAGACAACCCTCAAGTTGCTAAAGGTATCAATGTAATGGCTTGGTTCGTATTAGTAGGCTGGGCGATTTACGCTCGATC IDWTLTVPLMCVEFYLLTKPAGAKTSLLWKLIGASVLMLVAGYIGEAFNPEGGSTSHSVIWGVISTIGYIYILYAAWAGEVKQLAAKSDNPQVAKGINVMAWFVLVGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGATTGG------------------------ACATTAACTGTACCTTTAATGTGTGTTGAGTTTTATTTATTAACAAAGCCA---------GCA------GGAGCAAAAACA---AGTCTT------------------------------------CTTTGGAAA---TTAATCGGTGCTTCAGTATTAATGTTAGTAGCAGGATACATCGGAGAG---------GCA------------------TTC------AATCCT------------------------GAAGGT---GGT------------------AGC---------ACA---------------------------TCACACAGT------------------GTAATTTGG---GGTGTAATTTCAACAATCGGTTATATTTATATTCTTTATGCTGCA---------------TGG------GCT---GGAGAGGTTAAGCAATTAGCTGCAAAA------TCA---GACAACCCTCAAGTT---GCT---AAA---GGT---ATC---AAT---GTAATG---GCTTGGTTCGTATTAGTA---------------------------------------------------------------GGCTGG---------GCGATTTACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDW--------TLTVPLMCVEFYLLTKP---A--GAKT-SL------------LWK-LIGASVLMLVAGYIGE---A------F--NP--------EG-G------S---T---------SHS------VIW-GVISTIGYIYILYAA-----W--A-GEVKQLAAK--S-DNPQV-A-K-G-I-N-VM-AWFVLV---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [unk-env1-c]_FJ862963 [unk-env1-c] clone_20_FJ862963 gi|226897326|gb|FJ862963| Uncultured bacterium clone 20 putative proteorhodopsin mRNA, partial cds. Uncultured bacterium clone 20 putative proteorhodopsin mRNA, partial cds. FJ862963 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 mRNA other 07-DEC-2009 #na coastal seawater Atlantic Ocean marine 38.8489 -75.1076 Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na ATTGATTGGACATTAACTGTACCTTTAATGTGTGTTGAGTTTTATTTATTAACAAAGCCAGCAGGAGCAAAAACAAGTCTTCTTTGGAAATTAATCGGTGCTTCAGTATTAATGTTAGTAGCAGGATACATCGGAGAGGCATTCAATCCTGAAGGTGGTAGCACATCACACAGTGTAATTTGGGGTGTAATTTCAACAATCGGTTATATTTATATTCTTTATGCTGCATGGGCTGGAGAGGTTAAGCAATTAGCTGCAAAATCAGACAACCCTCAAGTTGCTAAAGGTATCAATGTAATGGCTTGGTTCGTATTAGTAGGCTGGGCGATTTACGCTCGATC IDWTLTVPLMCVEFYLLTKPAGAKTSLLWKLIGASVLMLVAGYIGEAFNPEGGSTSHSVIWGVISTIGYIYILYAAWAGEVKQLAAKSDNPQVAKGINVMAWFVLVGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGATTGG------------------------ACATTAACTGTACCTTTAATGTGTGTTGAGTTTTATTTATTAACAAAGCCA---------GCA------GGAGCAAAAACA---AGTCTT------------------------------------CTTTGGAAA---TTAATCGGTGCTTCAGTATTAATGTTAGTAGCAGGATACATCGGAGAG---------GCA------------------TTC------AATCCT------------------------GAAGGT---GGT------------------AGC---------ACA---------------------------TCACACAGT------------------GTAATTTGG---GGTGTAATTTCAACAATCGGTTATATTTATATTCTTTATGCTGCA---------------TGG------GCT---GGAGAGGTTAAGCAATTAGCTGCAAAA------TCA---GACAACCCTCAAGTT---GCT---AAA---GGT---ATC---AAT---GTAATG---GCTTGGTTCGTATTAGTA---------------------------------------------------------------GGCTGG---------GCGATTTACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDW--------TLTVPLMCVEFYLLTKP---A--GAKT-SL------------LWK-LIGASVLMLVAGYIGE---A------F--NP--------EG-G------S---T---------SHS------VIW-GVISTIGYIYILYAA-----W--A-GEVKQLAAK--S-DNPQV-A-K-G-I-N-VM-AWFVLV---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [unk-env1-c]_FJ862972 [unk-env1-c] clone_31_FJ862972 gi|226897344|gb|FJ862972| Uncultured bacterium clone 31 putative proteorhodopsin mRNA, partial cds. Uncultured bacterium clone 31 putative proteorhodopsin mRNA, partial cds. FJ862972 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 mRNA other 07-DEC-2009 #na coastal seawater Atlantic Ocean marine 38.8489 -75.1076 Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na ATTGACTGGACATTAACTGTACCTTTAATGTGTGTTGAGTTTTATTTATTAACAAAGCCAGCAGGAGCAAAAACAAGTCTTCTTTGGAAATTAATCGGTGCTTCAGTATTAATGTTAGTAGCAGGATACATCGGAGAGGCATTCAATCCTGAAGGTGGTAGCACATCACACAGTGTAATTTGGGGTGTAATTTCAACAATCGTTTATATTTATATTCTTTATGCTGCATGGGCTGGAGAGGTTAAGCAATTAGCTGCAAAATCAGACAACCCTCAAGTTGCTAAAGGTATCAATGTAATGGCTTGGTTCGTATTAGTAGGGTGGGCGATTTACGCTCGATC IDWTLTVPLMCVEFYLLTKPAGAKTSLLWKLIGASVLMLVAGYIGEAFNPEGGSTSHSVIWGVISTIVYIYILYAAWAGEVKQLAAKSDNPQVAKGINVMAWFVLVGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGACTGG------------------------ACATTAACTGTACCTTTAATGTGTGTTGAGTTTTATTTATTAACAAAGCCA---------GCA------GGAGCAAAAACA---AGTCTT------------------------------------CTTTGGAAA---TTAATCGGTGCTTCAGTATTAATGTTAGTAGCAGGATACATCGGAGAG---------GCA------------------TTC------AATCCT------------------------GAAGGT---GGT------------------AGC---------ACA---------------------------TCACACAGT------------------GTAATTTGG---GGTGTAATTTCAACAATCGTTTATATTTATATTCTTTATGCTGCA---------------TGG------GCT---GGAGAGGTTAAGCAATTAGCTGCAAAA------TCA---GACAACCCTCAAGTT---GCT---AAA---GGT---ATC---AAT---GTAATG---GCTTGGTTCGTATTAGTA---------------------------------------------------------------GGGTGG---------GCGATTTACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDW--------TLTVPLMCVEFYLLTKP---A--GAKT-SL------------LWK-LIGASVLMLVAGYIGE---A------F--NP--------EG-G------S---T---------SHS------VIW-GVISTIVYIYILYAA-----W--A-GEVKQLAAK--S-DNPQV-A-K-G-I-N-VM-AWFVLV---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [unk-env1-c]_FJ862971 [unk-env1-c] clone_30_FJ862971 gi|226897342|gb|FJ862971| Uncultured bacterium clone 30 putative proteorhodopsin mRNA, partial cds. Uncultured bacterium clone 30 putative proteorhodopsin mRNA, partial cds. FJ862971 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 mRNA other 07-DEC-2009 #na coastal seawater Atlantic Ocean marine 38.8489 -75.1076 Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na ATAGATTGGACATTAACTGTACCTTTAATGTGTGTTGAGTTTTATTTATTAACAAAGCCAGCAGGAGCAAAAACAAGTCTTCTTTGGAAATTAATCGGTGCTTCAGTATTAATGTTAGTAGCAGGATACATCGGAGAGGCATTCAATCCTGAAGGTGGTAGCACATCACACAGTGTAATTTGGGGTGTAATTTCAACAATCGGTTATATTTATATTCTTTATGCTGCATGGGCTGGAGAGGTTAAGCAATTAGCTGCAAAATCAGACAACCCTCAAGTTGCTAAAGGTATCAATGTAATGGCTTGGTTCGTATTAGTAGGGTGGGCAATCTATGCTCGATC IDWTLTVPLMCVEFYLLTKPAGAKTSLLWKLIGASVLMLVAGYIGEAFNPEGGSTSHSVIWGVISTIGYIYILYAAWAGEVKQLAAKSDNPQVAKGINVMAWFVLVGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAGATTGG------------------------ACATTAACTGTACCTTTAATGTGTGTTGAGTTTTATTTATTAACAAAGCCA---------GCA------GGAGCAAAAACA---AGTCTT------------------------------------CTTTGGAAA---TTAATCGGTGCTTCAGTATTAATGTTAGTAGCAGGATACATCGGAGAG---------GCA------------------TTC------AATCCT------------------------GAAGGT---GGT------------------AGC---------ACA---------------------------TCACACAGT------------------GTAATTTGG---GGTGTAATTTCAACAATCGGTTATATTTATATTCTTTATGCTGCA---------------TGG------GCT---GGAGAGGTTAAGCAATTAGCTGCAAAA------TCA---GACAACCCTCAAGTT---GCT---AAA---GGT---ATC---AAT---GTAATG---GCTTGGTTCGTATTAGTA---------------------------------------------------------------GGGTGG---------GCAATCTATGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDW--------TLTVPLMCVEFYLLTKP---A--GAKT-SL------------LWK-LIGASVLMLVAGYIGE---A------F--NP--------EG-G------S---T---------SHS------VIW-GVISTIGYIYILYAA-----W--A-GEVKQLAAK--S-DNPQV-A-K-G-I-N-VM-AWFVLV---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [unk-env1-c]_FJ862952 [unk-env1-c] clone_08_FJ862952 gi|226897304|gb|FJ862952| Uncultured bacterium clone 08 putative proteorhodopsin mRNA, partial cds. Uncultured bacterium clone 08 putative proteorhodopsin mRNA, partial cds. FJ862952 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 mRNA other 07-DEC-2009 #na coastal seawater Atlantic Ocean marine 38.8489 -75.1076 Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTAGATTGGACATTAACTGTACCTTTAATGTGTGTTGAGTTTTATTTATTAACAAAGCCAGCAGGAGCAAAAACAAGTCTTCTTTGGAAATTAATCGGTGCTTCAGTATTAATGTTAGTAGCAGGATACATCGGAGAGGCATTCAATCCTGAAGGTGGTAGCACATCACACAGTGTAATTTGGGGTGTAATTTCAACAATCGGTTATATTTATATTCTTTATGCTGCATGGGCTGGAGAGGTTAAGCAATTAGCTGCAAAATCAGACAACCCTCAAGTTGCTAAAGGTATCAATGTAATGGCTTGGCTCGTATTAGTAGGTTGGGCGATCTACGCTCGATC VDWTLTVPLMCVEFYLLTKPAGAKTSLLWKLIGASVLMLVAGYIGEAFNPEGGSTSHSVIWGVISTIGYIYILYAAWAGEVKQLAAKSDNPQVAKGINVMAWLVLVGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGATTGG------------------------ACATTAACTGTACCTTTAATGTGTGTTGAGTTTTATTTATTAACAAAGCCA---------GCA------GGAGCAAAAACA---AGTCTT------------------------------------CTTTGGAAA---TTAATCGGTGCTTCAGTATTAATGTTAGTAGCAGGATACATCGGAGAG---------GCA------------------TTC------AATCCT------------------------GAAGGT---GGT------------------AGC---------ACA---------------------------TCACACAGT------------------GTAATTTGG---GGTGTAATTTCAACAATCGGTTATATTTATATTCTTTATGCTGCA---------------TGG------GCT---GGAGAGGTTAAGCAATTAGCTGCAAAA------TCA---GACAACCCTCAAGTT---GCT---AAA---GGT---ATC---AAT---GTAATG---GCTTGGCTCGTATTAGTA---------------------------------------------------------------GGTTGG---------GCGATCTACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------TLTVPLMCVEFYLLTKP---A--GAKT-SL------------LWK-LIGASVLMLVAGYIGE---A------F--NP--------EG-G------S---T---------SHS------VIW-GVISTIGYIYILYAA-----W--A-GEVKQLAAK--S-DNPQV-A-K-G-I-N-VM-AWLVLV---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [unk-env1-c]_FJ862960 [unk-env1-c] clone_17_FJ862960 gi|226897320|gb|FJ862960| Uncultured bacterium clone 17 putative proteorhodopsin mRNA, partial cds. Uncultured bacterium clone 17 putative proteorhodopsin mRNA, partial cds. FJ862960 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 mRNA other 07-DEC-2009 #na coastal seawater Atlantic Ocean marine 38.8489 -75.1076 Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTTGATTGGACATTAACTGTACCTTTAATGTGTGTTGAGTTTTATTTATTAACAAAGCCAGCAGGAGCAAAAACAAGTCTTCTTTGGAAATTAATCGGTGCTTCAGTATTAATGTTAGTAGCAGGATACATCGGAGAGGCATTCAATCCTGAAGGTGGTAGCACATCACACAGTGTAATTTGGGGTGTAATTTCAACAATCGGTTACATTTATATTCTTTATGCTGCATGGGCTGGAGAGGTTAAGCAATTGGCTGCAAAATCAGGCAACCCTCAAGTTGCTAAAGGTATCAATGTAATGGCTTGGTTCGTGTTAGTAGGTTGGGCTATATACGCTCGATC VDWTLTVPLMCVEFYLLTKPAGAKTSLLWKLIGASVLMLVAGYIGEAFNPEGGSTSHSVIWGVISTIGYIYILYAAWAGEVKQLAAKSGNPQVAKGINVMAWFVLVGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGATTGG------------------------ACATTAACTGTACCTTTAATGTGTGTTGAGTTTTATTTATTAACAAAGCCA---------GCA------GGAGCAAAAACA---AGTCTT------------------------------------CTTTGGAAA---TTAATCGGTGCTTCAGTATTAATGTTAGTAGCAGGATACATCGGAGAG---------GCA------------------TTC------AATCCT------------------------GAAGGT---GGT------------------AGC---------ACA---------------------------TCACACAGT------------------GTAATTTGG---GGTGTAATTTCAACAATCGGTTACATTTATATTCTTTATGCTGCA---------------TGG------GCT---GGAGAGGTTAAGCAATTGGCTGCAAAA------TCA---GGCAACCCTCAAGTT---GCT---AAA---GGT---ATC---AAT---GTAATG---GCTTGGTTCGTGTTAGTA---------------------------------------------------------------GGTTGG---------GCTATATACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------TLTVPLMCVEFYLLTKP---A--GAKT-SL------------LWK-LIGASVLMLVAGYIGE---A------F--NP--------EG-G------S---T---------SHS------VIW-GVISTIGYIYILYAA-----W--A-GEVKQLAAK--S-GNPQV-A-K-G-I-N-VM-AWFVLV---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [unk-env1-c]_FJ862961 [unk-env1-c] clone_18_FJ862961 gi|226897322|gb|FJ862961| Uncultured bacterium clone 18 putative proteorhodopsin mRNA, partial cds. Uncultured bacterium clone 18 putative proteorhodopsin mRNA, partial cds. FJ862961 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 mRNA other 07-DEC-2009 #na coastal seawater Atlantic Ocean marine 38.8489 -75.1076 Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters Lami,R., Cottrell,M.T., Campbell,B.J. and Kirchman,D.L. Environ. Microbiol. (2009) In press 19691506 #na GTTGATTGGACATTAACTGTACCTTTAATGTGTGTTGAGTTTTATTTATTAACAAAGCCAGCAGGAGCAAAAACAAGTCTTCTTTGGAAATTAATCGGTGCTTCAGTATTAATGTTAGTAGCAGGATACATCGGAGAGGCATTCAATCCTGAAGGTGGTAGCACATCACACAGTGTAATTTGGGGTGTAATTTCAACAATCGGTTACATTTATATTCTTTATGCTGCATGGGCTGGAGAGGTTAAGCAATTGGCTGCAAAATCAGGCAACCCTCAAGTTGCTAAAGGTATCAATGTAATGGCTTGGTTCGTGTTAGTAGGTTGGGCTATATACGCTCGATC VDWTLTVPLMCVEFYLLTKPAGAKTSLLWKLIGASVLMLVAGYIGEAFNPEGGSTSHSVIWGVISTIGYIYILYAAWAGEVKQLAAKSGNPQVAKGINVMAWFVLVGWAIYAR ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGATTGG------------------------ACATTAACTGTACCTTTAATGTGTGTTGAGTTTTATTTATTAACAAAGCCA---------GCA------GGAGCAAAAACA---AGTCTT------------------------------------CTTTGGAAA---TTAATCGGTGCTTCAGTATTAATGTTAGTAGCAGGATACATCGGAGAG---------GCA------------------TTC------AATCCT------------------------GAAGGT---GGT------------------AGC---------ACA---------------------------TCACACAGT------------------GTAATTTGG---GGTGTAATTTCAACAATCGGTTACATTTATATTCTTTATGCTGCA---------------TGG------GCT---GGAGAGGTTAAGCAATTGGCTGCAAAA------TCA---GGCAACCCTCAAGTT---GCT---AAA---GGT---ATC---AAT---GTAATG---GCTTGGTTCGTGTTAGTA---------------------------------------------------------------GGTTGG---------GCTATATACGCTCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------TLTVPLMCVEFYLLTKP---A--GAKT-SL------------LWK-LIGASVLMLVAGYIGE---A------F--NP--------EG-G------S---T---------SHS------VIW-GVISTIGYIYILYAA-----W--A-GEVKQLAAK--S-GNPQV-A-K-G-I-N-VM-AWFVLV---------------------GW---AIYAR------------------------------------------------------------------------------------------------- [unk-env1-c]_JX863206 [unk-env1-c] MALINA_OTU60_398_M_env_samples_JX863206 gi|425477362|gb|JX863206| Uncultured bacterium clone MALINA OTU60 398 M putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU60 398 M putative proteorhodopsin gene, partial cds JX863206 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 16Aug2009 0m_depth Arctic Ocean marine 69.51 -133.42 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGACGCTTACTGTTCCTTTAATGTGTGTGGAATTCTACTTATTGACTAAAGCTGCAGGCGCAAAATTGTCGCTTCTTTGGAAATTGATCATAGCGTCTGTTTGGATGTTAGTAGCAGGATACATTGGTGAAGCATTTAATCCAGAAGGTGGAGATTCTACCCATTCTGTATTATGGGGTTTCATTTCAACATTAGGATATCTCTACATACTCTACACAGCATGGTTTGGTGAGGTAGCGCAATTGGCTGCTGCATCAGATAATGAAGTGGTGAAGCGCGGTGCGCGCATTCTAGCCTGGTTTGTCTTGGTA WTLTVPLMCVEFYLLTKAAGAKLSLLWKLIIASVWMLVAGYIGEAFNPEGGDSTHSVLWGFISTLGYLYILYTAWFGEVAQLAAASDNEVVKRGARILAWFVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------ACGCTTACTGTTCCTTTAATGTGTGTGGAATTCTACTTATTGACTAAAGCT---------GCA------GGCGCAAAATTG---TCGCTT------------------------------------CTTTGGAAA---TTGATCATAGCGTCTGTTTGGATGTTAGTAGCAGGATACATTGGTGAA---------GCA------------------TTT------AATCCA------------------------GAAGGT---GGA------------------GAT---------TCT---------------------------ACCCATTCT------------------GTATTATGG---GGTTTCATTTCAACATTAGGATATCTCTACATACTCTACACAGCA---------------TGG------TTT---GGTGAGGTAGCGCAATTGGCTGCTGCA------TCA---GATAATGAAGTGGTG---AAG---CGC---GGT---GCG---CGC---ATTCTA---GCCTGGTTTGTCTTGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------TLTVPLMCVEFYLLTKA---A--GAKL-SL------------LWK-LIIASVWMLVAGYIGE---A------F--NP--------EG-G------D---S---------THS------VLW-GFISTLGYLYILYTA-----W--F-GEVAQLAAA--S-DNEVV-K-R-G-A-R-IL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_JX863207 [unk-env1-c] MALINA_OTU60_414_M_env_samples_JX863207 gi|425477364|gb|JX863207| Uncultured bacterium clone MALINA OTU60 414 M putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU60 414 M putative proteorhodopsin gene, partial cds JX863207 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 16Aug2009 0m_depth Arctic Ocean marine 69.51 -133.42 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGACGCTTACTGTTCCTTTAATGTGTGTGGAATTCTACTTATTGACTAAAGCTGCAGGCGCAAAATTGTCGCTTCTTTGGAAATTGATCATAGCGTCTGTTTGGATGTTAGTAGCAGGATACATTGGTGAAGCATTTAATCCAGAAGGTGGAGATTCTACCCATTCTGTAATATGGGGTTTCATTTCAACATTAGGATATCTCTACATACTCTACACAGCATGGTTTGGTGAGGTAGCGCAATTGGCTGCTGCATCAGATAATGAGGTGGTGAAGCGCGGTGTGCGCATTCTAGCCTGGTTTGTCTTGGTA WTLTVPLMCVEFYLLTKAAGAKLSLLWKLIIASVWMLVAGYIGEAFNPEGGDSTHSVIWGFISTLGYLYILYTAWFGEVAQLAAASDNEVVKRGVRILAWFVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------ACGCTTACTGTTCCTTTAATGTGTGTGGAATTCTACTTATTGACTAAAGCT---------GCA------GGCGCAAAATTG---TCGCTT------------------------------------CTTTGGAAA---TTGATCATAGCGTCTGTTTGGATGTTAGTAGCAGGATACATTGGTGAA---------GCA------------------TTT------AATCCA------------------------GAAGGT---GGA------------------GAT---------TCT---------------------------ACCCATTCT------------------GTAATATGG---GGTTTCATTTCAACATTAGGATATCTCTACATACTCTACACAGCA---------------TGG------TTT---GGTGAGGTAGCGCAATTGGCTGCTGCA------TCA---GATAATGAGGTGGTG---AAG---CGC---GGT---GTG---CGC---ATTCTA---GCCTGGTTTGTCTTGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------TLTVPLMCVEFYLLTKA---A--GAKL-SL------------LWK-LIIASVWMLVAGYIGE---A------F--NP--------EG-G------D---S---------THS------VIW-GFISTLGYLYILYTA-----W--F-GEVAQLAAA--S-DNEVV-K-R-G-V-R-IL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ926149 [unk-env1-c] BOUM_OTU062_env_samples gb|KJ926149| Uncultured bacterium clone BOUM OTU062 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU062 putative proteorhodopsin gene, partial cds KJ926149 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 38.96217 14.32367 #na #na #na #na #na GTAGATTGGATTTTAACAGTTCCATTAATGTGTGTTGAGTTCTATCTATTAACAAGACTTGCTGGTGCAACGAAAACACTTTTATGGAAACTAATCATTGCTTCTACTTGGATGTTAGTTGCAGGATATATAGGAGAGGCATTCAGTGATGGAAGTACATCTCACTCTGTAACTTGGGGTGCTTTGTCTACCGTTGGTTATTTATACGTTCTCTACACTGCTTGGTTTGGAGAAGTTGCACAATTAGCTGCAAATAGTAAATCTGAAGTTATTGAAAAGGGTGTAAGAGCTCTTGCTTGGTTTGTGCTTGTTGGCTGGGCAATCTAT VDWILTVPLMCVEFYLLTRLAGATKTLLWKLIIASTWMLVAGYIGEAFSDGSTSHSVTWGALSTVGYLYVLYTAWFGEVAQLAANSKSEVIEKGVRALAWFVLVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGATTGG------------------------ATTTTAACAGTTCCATTAATGTGTGTTGAGTTCTATCTATTAACAAGACTT---------GCT------GGTGCAACGAAA---ACACTT------------------------------------TTATGGAAA---CTAATCATTGCTTCTACTTGGATGTTAGTTGCAGGATATATAGGAGAG---------GCA------------------TTC------AGTGAT---------------------------------GGA------------------AGT---------ACA---------------------------TCTCACTCT------------------GTAACTTGG---GGTGCTTTGTCTACCGTTGGTTATTTATACGTTCTCTACACTGCT---------------TGG------TTT---GGAGAAGTTGCACAATTAGCTGCAAAT------AGT---AAATCTGAAGTTATT---GAA---AAG---GGT---GTA---AGA---GCTCTT---GCTTGGTTTGTGCTTGTT------------------------------------------------------------------------GGCTGGGCAATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------ILTVPLMCVEFYLLTRL---A--GATK-TL------------LWK-LIIASTWMLVAGYIGE---A------F--SD-----------G------S---T---------SHS------VTW-GALSTVGYLYVLYTA-----W--F-GEVAQLAAN--S-KSEVI-E-K-G-V-R-AL-AWFVLV------------------------GWAIY--------------------------------------------------------------------------------------------------- [unk-env1-c]_DQ927039 [unk-env1-c] clone_AT06036_DQ927039 gi|116294193|gb|DQ927039| Uncultured bacterium clone AT06036 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT06036 putative proteorhodopsin gene, partial cds. DQ927039 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na CTATTAGCGTCTACTGTATTCTTCTTTGCAGAAATGAGATCAGTTGATAAAAAGTGGAGAATGTCTCTTCTTGTATCAGCTCTTATTACAGGTATTGCTGCTGTTCACTATTACTACATGAGAGATTACTATCTAGCATTTGGTGAAAACCCAACATTCTACAGATATGTTGACTGGATTTTAACAGTACCTCTAATGTGTGTTGAATTTTATTTATTAACAAGAATGGCTGGAGCTACAAAAAGCTTAATGTGGAAGCTAATTATTGCATCAACATGGATGCTAATTGCGGGTTACATTGGTGAGTCATTCAATCCAGAAGGTGGAAGTACTTCTCACTCTGTTACATGGGGTGTAATTTCAACTTTAGGTTACTTATACGTTCTTTATACTGCATGGTATGGAGAAGTTGCTCAGCTTGCTGAGAAGAGTAATGATGAAGTTGTCAAGAGAGGTGTTAGAACATTAGCTTGGTTTGTATTAGTTGGATGGGCCATCTACCCA LLASTVFFFAEMRSVDKKWRMSLLVSALITGIAAVHYYYMRDYYLAFGENPTFYRYVDWILTVPLMCVEFYLLTRMAGATKSLMWKLIIASTWMLIAGYIGESFNPEGGSTSHSVTWGVISTLGYLYVLYTAWYGEVAQLAEKSNDEVVKRGVRTLAWFVLVGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGTCTACTGTATTCTTCTTTGCAGAAATGAGATCAGTTGATAAAAAGTGGAGAATGTCTCTTCTTGTATCAGCTCTTATTACAGGTATTGCTGCTGTTCACTATTACTACATGAGAGATTACTATCTA---------------------------------------------------GCATTTGGTGAAAACCCAACATTCTACAGATATGTTGACTGG------------------------ATTTTAACAGTACCTCTAATGTGTGTTGAATTTTATTTATTAACAAGAATG---------GCT------GGAGCTACAAAA---AGCTTA------------------------------------ATGTGGAAG---CTAATTATTGCATCAACATGGATGCTAATTGCGGGTTACATTGGTGAG---------TCA------------------TTC------AATCCA------------------------GAAGGT---GGA------------------AGT---------ACT---------------------------TCTCACTCT------------------GTTACATGG---GGTGTAATTTCAACTTTAGGTTACTTATACGTTCTTTATACTGCA---------------TGG------TAT---GGAGAAGTTGCTCAGCTTGCTGAGAAG------AGT---AATGATGAAGTTGTC---AAG---AGA---GGT---GTT---AGA---ACATTA---GCTTGGTTTGTATTAGTT---------------------------------------------------------------GGATGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LLASTVFFFAEMRSVDKKWRMSLLVSALITGIAAVHYYYMRDYYL-----------------AFGENPTFYRYVDW--------ILTVPLMCVEFYLLTRM---A--GATK-SL------------MWK-LIIASTWMLIAGYIGE---S------F--NP--------EG-G------S---T---------SHS------VTW-GVISTLGYLYVLYTA-----W--Y-GEVAQLAEK--S-NDEVV-K-R-G-V-R-TL-AWFVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ926209 [unk-env1-c] RHOMEO_AG_OTU24 gb|KJ926209| Uncultured bacterium cloneRHOMEO AG OTU24 putative proteorhodopsin gene, partial cds Uncultured bacterium cloneRHOMEO AG OTU24 putative proteorhodopsin gene, partial cds KJ926209 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] #na genomic_DNA other #na 2012 3m_depth English Channel marine 48.771667 -3.968333 #na #na #na #na #na TGGACTTTAACTGTTCCTTTAATGTGTGTTGAGTTCTACTTACTTACTAAGGTTGCTGGTGCAAAATCTAGTCTTTTGTGGAAGCTGATTGGTGCTTCTGTATTGATGCTAGTTGCTGGTTACATTGGTGAAGCTTTCAACCCTGAAGGTGGTAGCACTGCTCACTCTGTTAAGTGGGGTGTTATTTCTACAGTAGGTTATGTTTACATTCTTTATACCGCTTGGTATGGTGAGGTAGCTAACTTGGCTGCTAGTAGTGGAAGTGAAGCTGTTAAAACTGGTGTTAGAACTCTAGCATGGTTTGTATTAGTT WTLTVPLMCVEFYLLTKVAGAKSSLLWKLIGASVLMLVAGYIGEAFNPEGGSTAHSVKWGVISTVGYVYILYTAWYGEVANLAASSGSEAVKTGVRTLAWFVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------ACTTTAACTGTTCCTTTAATGTGTGTTGAGTTCTACTTACTTACTAAGGTT---------GCT------GGTGCAAAATCT---AGTCTT------------------------------------TTGTGGAAG---CTGATTGGTGCTTCTGTATTGATGCTAGTTGCTGGTTACATTGGTGAA---------GCT------------------TTC------AACCCT------------------------GAAGGT---GGT------------------AGC---------ACT---------------------------GCTCACTCT------------------GTTAAGTGG---GGTGTTATTTCTACAGTAGGTTATGTTTACATTCTTTATACCGCT---------------TGG------TAT---GGTGAGGTAGCTAACTTGGCTGCTAGT------AGT---GGAAGTGAAGCTGTT---AAA---ACT---GGT---GTT---AGA---ACTCTA---GCATGGTTTGTATTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------TLTVPLMCVEFYLLTKV---A--GAKS-SL------------LWK-LIGASVLMLVAGYIGE---A------F--NP--------EG-G------S---T---------AHS------VKW-GVISTVGYVYILYTA-----W--Y-GEVANLAAS--S-GSEAV-K-T-G-V-R-TL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ926157 [unk-env1-c] BOUM_OTU070_env_samples gb|KJ926157| Uncultured bacterium clone BOUM OTU070 putative proteorhodopsin gene, partial cds Uncultured bacterium clone BOUM OTU070 putative proteorhodopsin gene, partial cds KJ926157 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] #na genomic_DNA other #na 2008 #na Mediterranean Sea marine 33.709667 32.644667 #na #na #na #na #na GTAGATTGGACGCTGACTGTTCCGTTGATGTGCGTTGAATTTTATTTATTAACTAAAGCTGCCGGAGCAAAACTGAGCTTATTATGGAAACTAATTGTAGCTTCTGTATGGATGCTAGTTGCAGGTTACATCGGAGAATCTTTCAACCCTGAAGGTGGAAGTACTTCTCACTCAGTAACTTGGGGTGTTCTATCAACTATTGGTTATGTTTACATTCTTTACACAGCATGGTTCGGTGAAGTGGCTAAATTGGCTGCTGACAGCAACAACGAATTGGTAAAGAAAGGTGTTAGAACTCTAGCTTGGTTTGTCTTAGTTGGATGGGCCATATAT VDWTLTVPLMCVEFYLLTKAAGAKLSLLWKLIVASVWMLVAGYIGESFNPEGGSTSHSVTWGVLSTIGYVYILYTAWFGEVAKLAADSNNELVKKGVRTLAWFVLVGWAIY ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGATTGG------------------------ACGCTGACTGTTCCGTTGATGTGCGTTGAATTTTATTTATTAACTAAAGCT---------GCC------GGAGCAAAACTG---AGCTTA------------------------------------TTATGGAAA---CTAATTGTAGCTTCTGTATGGATGCTAGTTGCAGGTTACATCGGAGAA---------TCT------------------TTC------AACCCT------------------------GAAGGT---GGA------------------AGT---------ACT---------------------------TCTCACTCA------------------GTAACTTGG---GGTGTTCTATCAACTATTGGTTATGTTTACATTCTTTACACAGCA---------------TGG------TTC---GGTGAAGTGGCTAAATTGGCTGCTGAC------AGC---AACAACGAATTGGTA---AAG---AAA---GGT---GTT---AGA---ACTCTA---GCTTGGTTTGTCTTAGTT---------------------------------------------------------------GGATGG---------GCCATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------TLTVPLMCVEFYLLTKA---A--GAKL-SL------------LWK-LIVASVWMLVAGYIGE---S------F--NP--------EG-G------S---T---------SHS------VTW-GVLSTIGYVYILYTA-----W--F-GEVAKLAAD--S-NNELV-K-K-G-V-R-TL-AWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env1-c]_EU563287 [unk-env1-c] BTC_13E_35m_July_env_samples_EU563287 gi|171770584|gb|EU563287| Uncultured microorganism clone BTC 13E 35m July putative proteorhodopsin gene, partial cds Uncultured microorganism clone BTC 13E 35m July putative proteorhodopsin gene, partial cds EU563287 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 01-juil-06 Baltic_Sea_at_35m_depth Baltic Sea marine 57.32 20.05 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na AGGTATATAGATTGGATCCTAACAGTTCCTTTAATGTGCGTAGAGTTTTATTTACTAACGAAAGCTGCTGGTGCAAAATTAAGTTTACTTTGGAAACTTATCGCAGCCTCAGTTTGGATGTTGTTCGCCGGGTACATCGGAGAGGCATTCAATCCAGAAGGTGGAAGCATTTCACATTCCATGACATGGGGATTACTTTCCACAATTGGTTATGTTTACATCCTGTACACTGCATGGTTTGGTGAAGTAGCGAAATTAGCCGCTGGAAGCAACGACGATGCCGTTAAAAAAGGTGTGAAAGCACTTGCTTGGTTTGTCTTCGTTGGGTGGGCAATCTACCCA RYIDWILTVPLMCVEFYLLTKAAGAKLSLLWKLIAASVWMLFAGYIGEAFNPEGGSISHSMTWGLLSTIGYVYILYTAWFGEVAKLAAGSNDDAVKKGVKALAWFVFVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTATATAGATTGG------------------------ATCCTAACAGTTCCTTTAATGTGCGTAGAGTTTTATTTACTAACGAAAGCT---------GCT------GGTGCAAAATTA---AGTTTA------------------------------------CTTTGGAAA---CTTATCGCAGCCTCAGTTTGGATGTTGTTCGCCGGGTACATCGGAGAG---------GCA------------------TTC------AATCCA------------------------GAAGGT---GGA------------------AGC---------ATT---------------------------TCACATTCC------------------ATGACATGG---GGATTACTTTCCACAATTGGTTATGTTTACATCCTGTACACTGCA---------------TGG------TTT---GGTGAAGTAGCGAAATTAGCCGCTGGA------AGC---AACGACGATGCCGTT---AAA---AAA---GGT---GTG---AAA---GCACTT---GCTTGGTTTGTCTTCGTT---------------------------------------------------------------GGGTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------ILTVPLMCVEFYLLTKA---A--GAKL-SL------------LWK-LIAASVWMLFAGYIGE---A------F--NP--------EG-G------S---I---------SHS------MTW-GLLSTIGYVYILYTA-----W--F-GEVAKLAAG--S-NDDAV-K-K-G-V-K-AL-AWFVFV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env1-c]_JX863211 [unk-env1-c] MALINA_OTU64_422_M_env_samples_JX863211 gi|425477372|gb|JX863211| Uncultured bacterium clone MALINA OTU64 422 M putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU64 422 M putative proteorhodopsin gene, partial cds JX863211 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 16Aug2009 0m_depth Arctic Ocean marine 69.51 -133.42 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGACACTTACTGTTCCATTGATGTGTGTAGAATTTTATTTGCTTACCAAAGCAGCTGGAGCAAAAATCAACTTACTGTGGAAGCTTATTGGGGCATCAGTTCTGATGCTTGTGGCAGGTTACATTGGTGAAGCATTTAATCCTGAGGGAGGAAGCACAAGTCACTCAGTAATGTGGGGAGTTATATCTGCATTAGGATATATCTACATCCTTTACACTGCCTGGGCTGGTGAAGTAGCTAAATTAGCTGATGCTAGTGGAGATGCTGTCGTAAAAAAGGGCGTTCGTACTTTAGCTTGGTTTGTACTAGTA WTLTVPLMCVEFYLLTKAAGAKINLLWKLIGASVLMLVAGYIGEAFNPEGGSTSHSVMWGVISALGYIYILYTAWAGEVAKLADASGDAVVKKGVRTLAWFVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------ACACTTACTGTTCCATTGATGTGTGTAGAATTTTATTTGCTTACCAAAGCA---------GCT------GGAGCAAAAATC---AACTTA------------------------------------CTGTGGAAG---CTTATTGGGGCATCAGTTCTGATGCTTGTGGCAGGTTACATTGGTGAA---------GCA------------------TTT------AATCCT------------------------GAGGGA---GGA------------------AGC---------ACA---------------------------AGTCACTCA------------------GTAATGTGG---GGAGTTATATCTGCATTAGGATATATCTACATCCTTTACACTGCC---------------TGG------GCT---GGTGAAGTAGCTAAATTAGCTGATGCT------AGT---GGAGATGCTGTCGTA---AAA---AAG---GGC---GTT---CGT---ACTTTA---GCTTGGTTTGTACTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------TLTVPLMCVEFYLLTKA---A--GAKI-NL------------LWK-LIGASVLMLVAGYIGE---A------F--NP--------EG-G------S---T---------SHS------VMW-GVISALGYIYILYTA-----W--A-GEVAKLADA--S-GDAVV-K-K-G-V-R-TL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_JX863147 [unk-env1-c] MALINA_OTU06_382_M_env_samples_JX863147 gi|425477244|gb|JX863147| Uncultured bacterium clone MALINA OTU06 382 M putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU06 382 M putative proteorhodopsin gene, partial cds JX863147 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 16Aug2009 0m_depth Arctic Ocean marine 69.51 -133.42 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGACGCTTACAGTTCCTTTGATGTGTGTTGAATTCTATTTACTTACTAAAGCAGCTGGAGCTAAAATTGGCCTGCTTTGGAAATTAATCGCTGCATCAGTTTGGATGCTTGTAACAGGTTACATTGGTGAGGCATTTACAGACGGTTCTACTGGGCATTCAGTGCTATGGGGCTTCCTATCTGCCATAGGTTATTTCTACATTCTGTACACAGCTTGGTTTGGTGAGGTTGCGAAATTAGCAGATGCTAGTGAAAATGCAGCTGTTAAAAAAGGTGTAAGAACTTTAGCTTGGTTTGTGTTAGTA WTLTVPLMCVEFYLLTKAAGAKIGLLWKLIAASVWMLVTGYIGEAFTDGSTGHSVLWGFLSAIGYFYILYTAWFGEVAKLADASENAAVKKGVRTLAWFVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------ACGCTTACAGTTCCTTTGATGTGTGTTGAATTCTATTTACTTACTAAAGCA---------GCT------GGAGCTAAAATT---GGCCTG------------------------------------CTTTGGAAA---TTAATCGCTGCATCAGTTTGGATGCTTGTAACAGGTTACATTGGTGAG---------GCA------------------TTT------ACAGAC---------------------------------GGT------------------TCT---------ACT---------------------------GGGCATTCA------------------GTGCTATGG---GGCTTCCTATCTGCCATAGGTTATTTCTACATTCTGTACACAGCT---------------TGG------TTT---GGTGAGGTTGCGAAATTAGCAGATGCT------AGT---GAAAATGCAGCTGTT---AAA---AAA---GGT---GTA---AGA---ACTTTA---GCTTGGTTTGTGTTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------TLTVPLMCVEFYLLTKA---A--GAKI-GL------------LWK-LIAASVWMLVTGYIGE---A------F--TD-----------G------S---T---------GHS------VLW-GFLSAIGYFYILYTA-----W--F-GEVAKLADA--S-ENAAV-K-K-G-V-R-TL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_EU915942 [unk-env1-c] clone_H015-10_EU915942 gi|229358766|gb|EU915942| Uncultured bacterium clone H015-10 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone H015-10 putative proteorhodopsin gene, partial cds. EU915942 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTCGCCGCTACTGTGTTCTTCTTTTTTGAGAGAAGCAGAGTGAATGGAAAGTGGAAGCTTTCTTTACTAGTTTCTGGTTTAATTACTGGAATTGCAGCCGTACACTATTTCTACATGAGAGATTACTACGCGGCCACAGGTACTAACCCTACAGCTTTACGTTACATTGACTGGACATTGACTGTTCCTTTAATGTGTGTCGAGTTTTATTTATTGACGAAACCAGCAGGTGCTAAATCATCGCTCTTGTGGAAATTAGTTGGTGCGTCTGCACTAATGCTAGTAGCAGGTTACTATGGTGAAGCATTTGTAGATGGTGCAACTATGCACAGTGTAATGTGGGGTGTGATTTCAACTCTTGGATATGTGTACATCTTGTATACAGCGTGGTTCGGTGAAGTAAAACAACTTGCTGACAAGTCAGGTGATGCTACAGTAATTAACGGAATCAAAATATTAGGTTGGTTCGTTCTAGTAGGTTGGGCTATCTAC MVAATVFFFFERSRVNGKWKLSLLVSGLITGIAAVHYFYMRDYYAATGTNPTALRYIDWTLTVPLMCVEFYLLTKPAGAKSSLLWKLVGASALMLVAGYYGEAFVDGATMHSVMWGVISTLGYVYILYTAWFGEVKQLADKSGDATVINGIKILGWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCCGCTACTGTGTTCTTCTTTTTTGAGAGAAGCAGAGTGAATGGAAAGTGGAAGCTTTCTTTACTAGTTTCTGGTTTAATTACTGGAATTGCAGCCGTACACTATTTCTACATGAGAGATTACTACGCG---------------------------------------------------GCCACAGGTACTAACCCTACAGCTTTACGTTACATTGACTGG------------------------ACATTGACTGTTCCTTTAATGTGTGTCGAGTTTTATTTATTGACGAAACCA---------GCA------GGTGCTAAATCA---TCGCTC------------------------------------TTGTGGAAA---TTAGTTGGTGCGTCTGCACTAATGCTAGTAGCAGGTTACTATGGTGAA---------GCA------------------TTT------GTAGAT---------------------------------GGT------------------GCA---------ACT---------------------------ATGCACAGT------------------GTAATGTGG---GGTGTGATTTCAACTCTTGGATATGTGTACATCTTGTATACAGCG---------------TGG------TTC---GGTGAAGTAAAACAACTTGCTGACAAG------TCA---GGTGATGCTACAGTA---ATT---AAC---GGA---ATC---AAA---ATATTA---GGTTGGTTCGTTCTAGTA---------------------------------------------------------------GGTTGG---------GCTATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFFERSRVNGKWKLSLLVSGLITGIAAVHYFYMRDYYA-----------------ATGTNPTALRYIDW--------TLTVPLMCVEFYLLTKP---A--GAKS-SL------------LWK-LVGASALMLVAGYYGE---A------F--VD-----------G------A---T---------MHS------VMW-GVISTLGYVYILYTA-----W--F-GEVKQLADK--S-GDATV-I-N-G-I-K-IL-GWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env1-c]_EU915852 [unk-env1-c] APF1110_env_samples_EU915852 gi|229358586|gb|EU915852| Uncultured microorganism clone APF1110 putative proteorhodopsin gene, partial cds Uncultured microorganism clone APF1110 putative proteorhodopsin gene, partial cds EU915852 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample_at_200_m_depth Atlantic Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTTGCCGCTACTGTGTTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGGAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCCTCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGGACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCGGCAGGTGCGAAGTCCTCCTTCATGTGGAAGCTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAGGCCTTCACGGACGGCTCCACCGCCCATTCTGTCAAGTGGGGTGTGATCTCCACGATCGGTTATGCCTACATCCTCTACTCCGCCTGGTTCGGTGAGGCAAAGACGCTGGCTGCTTCCAGCAACTCAGCCGCTGTTGCCAAGGGTATCAATGCCCTTGCCTGGTCCGTGCTGGTGGGCTGGGCAATCCAC MLAATVFFFERGQVDGKWETSLLVSGLITGIAAVHYYYMRDYYASTGKTPVALRYIDWTLTVPLMCLEFYLLLKPAGAKSSFMWKLIAASVLMLVAGYIGEAFTDGSTAHSVKWGVISTIGYAYILYSAWFGEAKTLAASSNSAAVAKGINALAWSVLVGWAIH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACTGTG---TTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGGAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCC---------------------------------------------------TCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGG------------------------ACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCG---------GCA------GGTGCGAAGTCC---TCCTTC------------------------------------ATGTGGAAG---CTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAG---------GCC------------------TTC------ACGGAC---------------------------------GGC------------------TCC---------ACC---------------------------GCCCATTCT------------------GTCAAGTGG---GGTGTGATCTCCACGATCGGTTATGCCTACATCCTCTACTCCGCC---------------TGG------TTC---GGTGAGGCAAAGACGCTGGCTGCTTCC------AGC---AACTCAGCCGCTGTT---GCC---AAG---GGT---ATC---AAT---GCCCTT---GCCTGGTCCGTGCTGGTG---------------------------------------------------------------GGCTGG---------GCAATCCAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MLAATV-FFFERGQVDGKWETSLLVSGLITGIAAVHYYYMRDYYA-----------------STGKTPVALRYIDW--------TLTVPLMCLEFYLLLKP---A--GAKS-SF------------MWK-LIAASVLMLVAGYIGE---A------F--TD-----------G------S---T---------AHS------VKW-GVISTIGYAYILYSA-----W--F-GEAKTLAAS--S-NSAAV-A-K-G-I-N-AL-AWSVLV---------------------GW---AIH--------------------------------------------------------------------------------------------------- [unk-env1-c]_EF088538 [unk-env1-c] clone_APF1110_EF088538 gi|126843300|gb|EF088538| Uncultured bacterium clone APF1110 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone APF1110 putative proteorhodopsin gene, partial cds. EF088538 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na 200m water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGCTTGCCGCTACTGTGTTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGGAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCCTCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGGACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCGGCAGGTGCGAAGTCCTCCTTCATGTGGAAGCTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAGGCCTTCACGGACGGCTCCACCGCCCATTCTGTCAAGTGGGGTGTGATCTCCACGATCGGTTATGCCTACATCCTCTACTCCGCCTGGTTCGGTGAGGCAAAGACGCTGGCTGCTTCCAGCAACTCAGCCGCTGTTGCCAAGGGTATCAATGCCCTTGCCTGGTCCGTGCTGGTGGGCTGGGCAATCCACCCA MLAATVFFFERGQVDGKWETSLLVSGLITGIAAVHYYYMRDYYASTGKTPVALRYIDWTLTVPLMCLEFYLLLKPAGAKSSFMWKLIAASVLMLVAGYIGEAFTDGSTAHSVKWGVISTIGYAYILYSAWFGEAKTLAASSNSAAVAKGINALAWSVLVGWAIHP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACTGTG---TTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGGAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCC---------------------------------------------------TCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGG------------------------ACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCG---------GCA------GGTGCGAAGTCC---TCCTTC------------------------------------ATGTGGAAG---CTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAG---------GCC------------------TTC------ACGGAC---------------------------------GGC------------------TCC---------ACC---------------------------GCCCATTCT------------------GTCAAGTGG---GGTGTGATCTCCACGATCGGTTATGCCTACATCCTCTACTCCGCC---------------TGG------TTC---GGTGAGGCAAAGACGCTGGCTGCTTCC------AGC---AACTCAGCCGCTGTT---GCC---AAG---GGT---ATC---AAT---GCCCTT---GCCTGGTCCGTGCTGGTG---------------------------------------------------------------GGCTGG---------GCAATCCACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------MLAATV-FFFERGQVDGKWETSLLVSGLITGIAAVHYYYMRDYYA-----------------STGKTPVALRYIDW--------TLTVPLMCLEFYLLLKP---A--GAKS-SF------------MWK-LIAASVLMLVAGYIGE---A------F--TD-----------G------S---T---------AHS------VKW-GVISTIGYAYILYSA-----W--F-GEAKTLAAS--S-NSAAV-A-K-G-I-N-AL-AWSVLV---------------------GW---AIHP-------------------------------------------------------------------------------------------------- [unk-env1-c]_EF088606 [unk-env1-c] E400030_env_samples_EF088606 gi|126843453|gb|EF088606| Uncultured bacterium clone E400030 putative proteorhodopsin gene, partial cds Uncultured bacterium clone E400030 putative proteorhodopsin gene, partial cds EF088606 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na Bering_Sea_surface_water_sample Arctic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTCGCCGCTACTGTCTTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCCTCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGGACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCGGCAGGTGCGAAGTCCTCCTTCATGTGGAAGCTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAGGCCTTCACGGACGGCTCCACCGCCCATTCTGTCAAGTGGGGTGTGATCTCCACGATCGGTTATGCCTACATCCTCTACTCCGCCTGGTTCGGTGAGGCAAAGACGCTGGCTGCTTCCAGCAACTCAGCCGCTGTTGCCAAGGGTATCAATGCCCTTGCCTGGTCCGTGCTGGTGGGCTGGGCAATCCACCCA MVAATVFFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYASTGKTPVALRYIDWTLTVPLMCLEFYLLLKPAGAKSSFMWKLIAASVLMLVAGYIGEAFTDGSTAHSVKWGVISTIGYAYILYSAWFGEAKTLAASSNSAAVAKGINALAWSVLVGWAIHP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCCGCTACTGTC---TTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCC---------------------------------------------------TCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGG------------------------ACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCG---------GCA------GGTGCGAAGTCC---TCCTTC------------------------------------ATGTGGAAG---CTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAG---------GCC------------------TTC------ACGGAC---------------------------------GGC------------------TCC---------ACC---------------------------GCCCATTCT------------------GTCAAGTGG---GGTGTGATCTCCACGATCGGTTATGCCTACATCCTCTACTCCGCC---------------TGG------TTC---GGTGAGGCAAAGACGCTGGCTGCTTCC------AGC---AACTCAGCCGCTGTT---GCC---AAG---GGT---ATC---AAT---GCCCTT---GCCTGGTCCGTGCTGGTG---------------------------------------------------------------GGCTGG---------GCAATCCACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------MVAATV-FFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYA-----------------STGKTPVALRYIDW--------TLTVPLMCLEFYLLLKP---A--GAKS-SF------------MWK-LIAASVLMLVAGYIGE---A------F--TD-----------G------S---T---------AHS------VKW-GVISTIGYAYILYSA-----W--F-GEAKTLAAS--S-NSAAV-A-K-G-I-N-AL-AWSVLV---------------------GW---AIHP-------------------------------------------------------------------------------------------------- [unk-env1-c]_EF088616 [unk-env1-c] PF13016_env_samples_EF088616 gi|126843482|gb|EF088616| Uncultured bacterium clone PF13016 putative proteorhodopsin gene, partial cds Uncultured bacterium clone PF13016 putative proteorhodopsin gene, partial cds EF088616 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na surface_water_sample Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTGGCCGCTACTGCGTTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCCTCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGGACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCGGCAGGTGCGAAGTCCTCCTTCATGTGGAAGCTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAGGCCTTCACGGACGGCTCCACCGCCCATTCTGTCAAGTGGGGTGTGATCTCCACGATCGGTTATGCCTACATCCTCTACTCCGCCTGGTTCGGTGAGCCAAAGACGCTGGCTGCTTCCAGCAACTCAGCCGCTGTTGCCAAGGGTATCAATGCCCTTGCCTGGTCCGTGCTGGTGGGCTGGGCAATCCACCCA MVAATAFFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYASTGKTPVALRYIDWTLTVPLMCLEFYLLLKPAGAKSSFMWKLIAASVLMLVAGYIGEAFTDGSTAHSVKWGVISTIGYAYILYSAWFGEPKTLAASSNSAAVAKGINALAWSVLVGWAIHP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCG---TTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCC---------------------------------------------------TCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGG------------------------ACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCG---------GCA------GGTGCGAAGTCC---TCCTTC------------------------------------ATGTGGAAG---CTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAG---------GCC------------------TTC------ACGGAC---------------------------------GGC------------------TCC---------ACC---------------------------GCCCATTCT------------------GTCAAGTGG---GGTGTGATCTCCACGATCGGTTATGCCTACATCCTCTACTCCGCC---------------TGG------TTC---GGTGAGCCAAAGACGCTGGCTGCTTCC------AGC---AACTCAGCCGCTGTT---GCC---AAG---GGT---ATC---AAT---GCCCTT---GCCTGGTCCGTGCTGGTG---------------------------------------------------------------GGCTGG---------GCAATCCACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------MVAATA-FFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYA-----------------STGKTPVALRYIDW--------TLTVPLMCLEFYLLLKP---A--GAKS-SF------------MWK-LIAASVLMLVAGYIGE---A------F--TD-----------G------S---T---------AHS------VKW-GVISTIGYAYILYSA-----W--F-GEPKTLAAS--S-NSAAV-A-K-G-I-N-AL-AWSVLV---------------------GW---AIHP-------------------------------------------------------------------------------------------------- [unk-env1-c]_EU915921 [unk-env1-c] clone_NMC111_EU915921 gi|229358724|gb|EU915921| Uncultured bacterium clone NMC111 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone NMC111 putative proteorhodopsin gene, partial cds. EU915921 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGCGTTCTTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTTTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCCTCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGGACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCGGCAGGTGCGAAGTCCTCCTTCATGTGGAAGCTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAGGCCTTCACGGACGGCTCCACCGCCCATTCTGTCAAGTGGGGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCCTGGTTCGGTGAGGCAAAGACGCTGGCTGCTTCCAGCAACTCAGCCGCTGTTGCCAAGGGTATCAATGCCCTTGCCTGGTTCGTGCTGGTGGGGTGGGCAATTTAT MVAATAFFFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYASTGKTPVALRYIDWTLTVPLMCLEFYLLLKPAGAKSSFMWKLIAASVLMLVAGYIGEAFTDGSTAHSVKWGVISTIGYVYILYSAWFGEAKTLAASSNSAAVAKGINALAWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCGTTCTTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTTTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCC---------------------------------------------------TCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGG------------------------ACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCG---------GCA------GGTGCGAAGTCC---TCCTTC------------------------------------ATGTGGAAG---CTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAG---------GCC------------------TTC------ACGGAC---------------------------------GGC------------------TCC---------ACC---------------------------GCCCATTCT------------------GTCAAGTGG---GGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCC---------------TGG------TTC---GGTGAGGCAAAGACGCTGGCTGCTTCC------AGC---AACTCAGCCGCTGTT---GCC---AAG---GGT---ATC---AAT---GCCCTT---GCCTGGTTCGTGCTGGTG---------------------------------------------------------------GGGTGG---------GCAATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYA-----------------STGKTPVALRYIDW--------TLTVPLMCLEFYLLLKP---A--GAKS-SF------------MWK-LIAASVLMLVAGYIGE---A------F--TD-----------G------S---T---------AHS------VKW-GVISTIGYVYILYSA-----W--F-GEAKTLAAS--S-NSAAV-A-K-G-I-N-AL-AWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env1-c]_EF088607 [unk-env1-c] E400052_env_samples_EF088607 gi|126843455|gb|EF088607| Uncultured bacterium clone E400052 putative proteorhodopsin gene, partial cds Uncultured bacterium clone E400052 putative proteorhodopsin gene, partial cds EF088607 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na Bering_Sea_surface_water_sample Arctic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTGGCCGCTACTGCATTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCCTCGACGGACAAGACGCCTGTCGCCCTGCGCTACATCGACTGGACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCGGCAGGTGCGAAGTCCTCCTTCATGTGGAAGCTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAGGCCTTCACGGACGGCTCCACCGCCCATTCTGTCAAGTGGGGTGTGATCTCCACGACCGGTTATGTCTACATCCTCTACTCCGCCTGGTTCGGTGAGGCAAAGACGCTGGCTGCTTCCAGCAACTCAGCCGCTGTTGCCAAAGGTATCAATGCCCTTGCCTGGTTCGTGCTGGTGGGGTGGGCCATCTACCCA MVAATAFFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYASTDKTPVALRYIDWTLTVPLMCLEFYLLLKPAGAKSSFMWKLIAASVLMLVAGYIGEAFTDGSTAHSVKWGVISTTGYVYILYSAWFGEAKTLAASSNSAAVAKGINALAWFVLVGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCA---TTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCC---------------------------------------------------TCGACGGACAAGACGCCTGTCGCCCTGCGCTACATCGACTGG------------------------ACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCG---------GCA------GGTGCGAAGTCC---TCCTTC------------------------------------ATGTGGAAG---CTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAG---------GCC------------------TTC------ACGGAC---------------------------------GGC------------------TCC---------ACC---------------------------GCCCATTCT------------------GTCAAGTGG---GGTGTGATCTCCACGACCGGTTATGTCTACATCCTCTACTCCGCC---------------TGG------TTC---GGTGAGGCAAAGACGCTGGCTGCTTCC------AGC---AACTCAGCCGCTGTT---GCC---AAA---GGT---ATC---AAT---GCCCTT---GCCTGGTTCGTGCTGGTG---------------------------------------------------------------GGGTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------MVAATA-FFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYA-----------------STDKTPVALRYIDW--------TLTVPLMCLEFYLLLKP---A--GAKS-SF------------MWK-LIAASVLMLVAGYIGE---A------F--TD-----------G------S---T---------AHS------VKW-GVISTTGYVYILYSA-----W--F-GEAKTLAAS--S-NSAAV-A-K-G-I-N-AL-AWFVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env1-c]_EU915812 [unk-env1-c] PF92016_env_samples_EU915812 gi|229358506|gb|EU915812| Uncultured microorganism clone PF92016 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF92016 putative proteorhodopsin gene, partial cds EU915812 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTTGCCGCTACTGTGTTCTTCTTCGAGAGGGGTCAGGTCGATGGCAGGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACTGGCATTGCAGCCGTGCATTGCTATTACATGCGCGACTATTATGCCTCGACGGGCAAGACGTCTGTCGCCCTGCGCTACATCGACTGGACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCGGCAGGTGCGAAGTCCTCCTTCATGTGGAAGCTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAGGCCTTCACGGACGGCTCCACCGCCCATTCTGTCAAGTGGGGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCCTGGTTCGGTGAGGCAAAGACGCTGGCTGCTTCCAGCAACTCAGCCGCTGTTGCCAAGGGTATCAATGCCCTTGCCTGGTTCGTGCTGGTGGGGTGGGCCATATAC MVAATVFFFERGQVDGRWKTSLLVSGLITGIAAVHCYYMRDYYASTGKTSVALRYIDWTLTVPLMCLEFYLLLKPAGAKSSFMWKLIAASVLMLVAGYIGEAFTDGSTAHSVKWGVISTIGYVYILYSAWFGEAKTLAASSNSAAVAKGINALAWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTG---TTCTTCTTCGAGAGGGGTCAGGTCGATGGCAGGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACTGGCATTGCAGCCGTGCATTGCTATTACATGCGCGACTATTATGCC---------------------------------------------------TCGACGGGCAAGACGTCTGTCGCCCTGCGCTACATCGACTGG------------------------ACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCG---------GCA------GGTGCGAAGTCC---TCCTTC------------------------------------ATGTGGAAG---CTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAG---------GCC------------------TTC------ACGGAC---------------------------------GGC------------------TCC---------ACC---------------------------GCCCATTCT------------------GTCAAGTGG---GGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCC---------------TGG------TTC---GGTGAGGCAAAGACGCTGGCTGCTTCC------AGC---AACTCAGCCGCTGTT---GCC---AAG---GGT---ATC---AAT---GCCCTT---GCCTGGTTCGTGCTGGTG---------------------------------------------------------------GGGTGG---------GCCATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MVAATV-FFFERGQVDGRWKTSLLVSGLITGIAAVHCYYMRDYYA-----------------STGKTSVALRYIDW--------TLTVPLMCLEFYLLLKP---A--GAKS-SF------------MWK-LIAASVLMLVAGYIGE---A------F--TD-----------G------S---T---------AHS------VKW-GVISTIGYVYILYSA-----W--F-GEAKTLAAS--S-NSAAV-A-K-G-I-N-AL-AWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env1-c]_DQ926989 [unk-env1-c] clone_PF91102_DQ926989 gi|116294093|gb|DQ926989| Uncultured bacterium clone PF91102 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF91102 putative proteorhodopsin gene, partial cds. DQ926989 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGGTAGCCGCTACTGTGTTCTTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCCTCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGGACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCGGCAGGTGCAGAGTCCTCCTTCATGTGGAAGCTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAGGCCTTCACGGACGGCTCCACCGCCCATTCTGTCAAGTGGGGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCCTGGTTCGGTGAGGCAAAGACGCTGGCTGCTTCCAGCAACTCAGCCGCTGTTGCCAAGGGTATCAATGCCCTTGCCTGGTTCGTGCTGGTGGGGTGGGCCATATATCCA MVAATVFFFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYASTGKTPVALRYIDWTLTVPLMCLEFYLLLKPAGAESSFMWKLIAASVLMLVAGYIGEAFTDGSTAHSVKWGVISTIGYVYILYSAWFGEAKTLAASSNSAAVAKGINALAWFVLVGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTGTTCTTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCC---------------------------------------------------TCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGG------------------------ACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCG---------GCA------GGTGCAGAGTCC---TCCTTC------------------------------------ATGTGGAAG---CTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAG---------GCC------------------TTC------ACGGAC---------------------------------GGC------------------TCC---------ACC---------------------------GCCCATTCT------------------GTCAAGTGG---GGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCC---------------TGG------TTC---GGTGAGGCAAAGACGCTGGCTGCTTCC------AGC---AACTCAGCCGCTGTT---GCC---AAG---GGT---ATC---AAT---GCCCTT---GCCTGGTTCGTGCTGGTG---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYA-----------------STGKTPVALRYIDW--------TLTVPLMCLEFYLLLKP---A--GAES-SF------------MWK-LIAASVLMLVAGYIGE---A------F--TD-----------G------S---T---------AHS------VKW-GVISTIGYVYILYSA-----W--F-GEAKTLAAS--S-NSAAV-A-K-G-I-N-AL-AWFVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env1-c]_EU915803 [unk-env1-c] PF92085_env_samples_EU915803 gi|229358488|gb|EU915803| Uncultured microorganism clone PF92085 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF92085 putative proteorhodopsin gene, partial cds EU915803 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTAGCCGCTACTGCTTTCTTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCCTCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGGACGCTGGCGGTTCCCCTGATGTGCCTGGAGTTCTATCTACTGCTGAAGCCGGCAGGTGCGAGGTCCTCCTTCATGTGGAAGCTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAGGCCTTCACGGACGGCTCCACCGCCCATTCTGTCAAGTGGGGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCCTGGTTCGGTGAGGCAAAGACGCTGGCTGCTTCCAGCAACTCAGCCGCTGTTGCCAAGGGTATCAATGCCCTTGCCTGGTTCGTGCTGGTGGGGTGGGCCATATAC MVAATAFFFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYASTGKTPVALRYIDWTLAVPLMCLEFYLLLKPAGARSSFMWKLIAASVLMLVAGYIGEAFTDGSTAHSVKWGVISTIGYVYILYSAWFGEAKTLAASSNSAAVAKGINALAWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGCTTTCTTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCC---------------------------------------------------TCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGG------------------------ACGCTGGCGGTTCCCCTGATGTGCCTGGAGTTCTATCTACTGCTGAAGCCG---------GCA------GGTGCGAGGTCC---TCCTTC------------------------------------ATGTGGAAG---CTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAG---------GCC------------------TTC------ACGGAC---------------------------------GGC------------------TCC---------ACC---------------------------GCCCATTCT------------------GTCAAGTGG---GGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCC---------------TGG------TTC---GGTGAGGCAAAGACGCTGGCTGCTTCC------AGC---AACTCAGCCGCTGTT---GCC---AAG---GGT---ATC---AAT---GCCCTT---GCCTGGTTCGTGCTGGTG---------------------------------------------------------------GGGTGG---------GCCATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYA-----------------STGKTPVALRYIDW--------TLAVPLMCLEFYLLLKP---A--GARS-SF------------MWK-LIAASVLMLVAGYIGE---A------F--TD-----------G------S---T---------AHS------VKW-GVISTIGYVYILYSA-----W--F-GEAKTLAAS--S-NSAAV-A-K-G-I-N-AL-AWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env1-c]_EU915923 [unk-env1-c] clone_NMC8_EU915923 gi|229358728|gb|EU915923| Uncultured bacterium clone NMC8 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone NMC8 putative proteorhodopsin gene, partial cds. EU915923 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGCGTTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATCGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCCTCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGGACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCGGCAGGTGCGAAGTCCTCCTTCATGTGGAAGCTGACCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAGGCCTTCACGGACGGCTCCACCGCCCATTCTGTCAAGTGGGGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCCTGGTTCGGTGAGGCAAAGACGCTGGCTGCTTCCAGCAACTCAGCCGCTGTTGCCAAGGGTATCAATGCCCTTGCCTGGTTCGTGCTGGTGGGGTGGGCCATATAT MVAATAFFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYASTGKTPVALRYIDWTLTVPLMCLEFYLLLKPAGAKSSFMWKLTAASVLMLVAGYIGEAFTDGSTAHSVKWGVISTIGYVYILYSAWFGEAKTLAASSNSAAVAKGINALAWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCG---TTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATCGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCC---------------------------------------------------TCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGG------------------------ACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCG---------GCA------GGTGCGAAGTCC---TCCTTC------------------------------------ATGTGGAAG---CTGACCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAG---------GCC------------------TTC------ACGGAC---------------------------------GGC------------------TCC---------ACC---------------------------GCCCATTCT------------------GTCAAGTGG---GGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCC---------------TGG------TTC---GGTGAGGCAAAGACGCTGGCTGCTTCC------AGC---AACTCAGCCGCTGTT---GCC---AAG---GGT---ATC---AAT---GCCCTT---GCCTGGTTCGTGCTGGTG---------------------------------------------------------------GGGTGG---------GCCATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MVAATA-FFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYA-----------------STGKTPVALRYIDW--------TLTVPLMCLEFYLLLKP---A--GAKS-SF------------MWK-LTAASVLMLVAGYIGE---A------F--TD-----------G------S---T---------AHS------VKW-GVISTIGYVYILYSA-----W--F-GEAKTLAAS--S-NSAAV-A-K-G-I-N-AL-AWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env1-c]_EU915920 [unk-env1-c] clone_NMC9_EU915920 gi|229358722|gb|EU915920| Uncultured bacterium clone NMC9 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone NMC9 putative proteorhodopsin gene, partial cds. EU915920 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGCGTTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATCGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCCTCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGGACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCGGCAGGTGCGAAGTCCTCCTTCATGTGGAAGCTGACCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAGGCCTTCACGGACGGCTCCACCGCCCATTCTGTCAAGTGGGGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCCTGGTTCGGTGAGGCAAAGACGCTGGCTGCTTCCAGCAACTCAGCCGCTGTTGCCAAGGGTATCAATGCCCTTGCCTGGTTCGTGCTGGTGGGGTGGGCCATATAT MVAATAFFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYASTGKTPVALRYIDWTLTVPLMCLEFYLLLKPAGAKSSFMWKLTAASVLMLVAGYIGEAFTDGSTAHSVKWGVISTIGYVYILYSAWFGEAKTLAASSNSAAVAKGINALAWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCG---TTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATCGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCC---------------------------------------------------TCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGG------------------------ACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCG---------GCA------GGTGCGAAGTCC---TCCTTC------------------------------------ATGTGGAAG---CTGACCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAG---------GCC------------------TTC------ACGGAC---------------------------------GGC------------------TCC---------ACC---------------------------GCCCATTCT------------------GTCAAGTGG---GGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCC---------------TGG------TTC---GGTGAGGCAAAGACGCTGGCTGCTTCC------AGC---AACTCAGCCGCTGTT---GCC---AAG---GGT---ATC---AAT---GCCCTT---GCCTGGTTCGTGCTGGTG---------------------------------------------------------------GGGTGG---------GCCATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MVAATA-FFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYA-----------------STGKTPVALRYIDW--------TLTVPLMCLEFYLLLKP---A--GAKS-SF------------MWK-LTAASVLMLVAGYIGE---A------F--TD-----------G------S---T---------AHS------VKW-GVISTIGYVYILYSA-----W--F-GEAKTLAAS--S-NSAAV-A-K-G-I-N-AL-AWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env1-c]_EF088644 [unk-env1-c] PF13037_env_samples_EF088644 gi|126843538|gb|EF088644| Uncultured bacterium clone PF13037 putative proteorhodopsin gene, partial cds Uncultured bacterium clone PF13037 putative proteorhodopsin gene, partial cds EF088644 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na surface_water_sample Pacific Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGCTTGCCGCTACTGCCTTCTTCTTCGAGAGGGGTCAGGTCAATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCCTCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGGACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCGGCAGGTGCGAAGTCCTCCTTCATGTGGAAGCTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAGGCCTTCACGGACGGCTCCACCGCCCATTCTGTCAAGTGGGGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCCTGGTTCGGTGAGGCAAAGACGCTGGCTGCTTCTAGCAACTCAGCAGCTGTTGCCAAGGGTATCAATGCCCTTGCCTGGTTCGTGCTGGTGGGGTGGGCCATCTAC MLAATAFFFERGQVNGKWKTSLLVSGLITGIAAVHYYYMRDYYASTGKTPVALRYIDWTLTVPLMCLEFYLLLKPAGAKSSFMWKLIAASVLMLVAGYIGEAFTDGSTAHSVKWGVISTIGYVYILYSAWFGEAKTLAASSNSAAVAKGINALAWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTGCCGCTACTGCC---TTCTTCTTCGAGAGGGGTCAGGTCAATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCC---------------------------------------------------TCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGG------------------------ACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCG---------GCA------GGTGCGAAGTCC---TCCTTC------------------------------------ATGTGGAAG---CTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAG---------GCC------------------TTC------ACGGAC---------------------------------GGC------------------TCC---------ACC---------------------------GCCCATTCT------------------GTCAAGTGG---GGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCC---------------TGG------TTC---GGTGAGGCAAAGACGCTGGCTGCTTCT------AGC---AACTCAGCAGCTGTT---GCC---AAG---GGT---ATC---AAT---GCCCTT---GCCTGGTTCGTGCTGGTG---------------------------------------------------------------GGGTGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MLAATA-FFFERGQVNGKWKTSLLVSGLITGIAAVHYYYMRDYYA-----------------STGKTPVALRYIDW--------TLTVPLMCLEFYLLLKP---A--GAKS-SF------------MWK-LIAASVLMLVAGYIGE---A------F--TD-----------G------S---T---------AHS------VKW-GVISTIGYVYILYSA-----W--F-GEAKTLAAS--S-NSAAV-A-K-G-I-N-AL-AWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env1-c]_DQ903125 [unk-env1-c] clone_A1S0019_DQ903125 gi|116293979|gb|DQ903125| Uncultured bacterium clone A1S0019 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A1S0019 putative proteorhodopsin gene, partial cds. DQ903125 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na South China Sea surface water (SCS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na ATGGTGGCCGCTACTGCTTTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACCATTACATGCGCGACTATTATGCCTCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGGACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCCATCTGCTGCTGAAGCCGGCAGGTGCGAAGTCCTCCTTCATGTGGAAGCTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAGGCCTTCACGGACGGCTCCACCGCCCATTCTGTCAAGTGGGGTGTGATCTCCACGATCGGTTATGTCTGCATCCTCTACTCCGCCTGGTTCGGTGAGGCAAAGACGCTGGCTGCTTCCAGCAACTCAGCCGCTGTTGCCAAGGGTATCAATGCCCTTGCCTGGTTCGTGCTGGTGGGGTGGGCTATATACCCA MVAATAFFFERGQVDGKWKTSLLVSGLITGIAAVHYHYMRDYYASTGKTPVALRYIDWTLTVPLMCLEFHLLLKPAGAKSSFMWKLIAASVLMLVAGYIGEAFTDGSTAHSVKWGVISTIGYVCILYSAWFGEAKTLAASSNSAAVAKGINALAWFVLVGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCT---TTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACCATTACATGCGCGACTATTATGCC---------------------------------------------------TCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGG------------------------ACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCCATCTGCTGCTGAAGCCG---------GCA------GGTGCGAAGTCC---TCCTTC------------------------------------ATGTGGAAG---CTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAG---------GCC------------------TTC------ACGGAC---------------------------------GGC------------------TCC---------ACC---------------------------GCCCATTCT------------------GTCAAGTGG---GGTGTGATCTCCACGATCGGTTATGTCTGCATCCTCTACTCCGCC---------------TGG------TTC---GGTGAGGCAAAGACGCTGGCTGCTTCC------AGC---AACTCAGCCGCTGTT---GCC---AAG---GGT---ATC---AAT---GCCCTT---GCCTGGTTCGTGCTGGTG---------------------------------------------------------------GGGTGG---------GCTATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------MVAATA-FFFERGQVDGKWKTSLLVSGLITGIAAVHYHYMRDYYA-----------------STGKTPVALRYIDW--------TLTVPLMCLEFHLLLKP---A--GAKS-SF------------MWK-LIAASVLMLVAGYIGE---A------F--TD-----------G------S---T---------AHS------VKW-GVISTIGYVCILYSA-----W--F-GEAKTLAAS--S-NSAAV-A-K-G-I-N-AL-AWFVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env1-c]_EF088599 [unk-env1-c] E400020_env_samples_EF088599 gi|126843439|gb|EF088599| Uncultured bacterium clone E400020 putative proteorhodopsin gene, partial cds Uncultured bacterium clone E400020 putative proteorhodopsin gene, partial cds EF088599 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na Bering_Sea_surface_water_sample Arctic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTGGCCGCTACTGCCTTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCCTCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGGACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCGGCAGGTGCGAAGTCCTCCTTCATGTGGAAGCTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAGGCCTTCACGGACGGCCCCACCGCCCATTCTGTCAGGTGGGGTGTGATCGCCACGATCGGTTATGTCTACATCCTCTACTCCGCCTGGTTCGGTGAGGCAAAGACGCTGGCTGCTTCCAGCAACTCAGCCGCTGTTGCCAAGGGTATCAATGCCCTTGCCTGGTTCGTGCTGGTGGGATGGGCTATATATCCA MVAATAFFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYASTGKTPVALRYIDWTLTVPLMCLEFYLLLKPAGAKSSFMWKLIAASVLMLVAGYIGEAFTDGPTAHSVRWGVIATIGYVYILYSAWFGEAKTLAASSNSAAVAKGINALAWFVLVGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCC---TTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCC---------------------------------------------------TCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGG------------------------ACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCG---------GCA------GGTGCGAAGTCC---TCCTTC------------------------------------ATGTGGAAG---CTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAG---------GCC------------------TTC------ACGGAC---------------------------------GGC------------------CCC---------ACC---------------------------GCCCATTCT------------------GTCAGGTGG---GGTGTGATCGCCACGATCGGTTATGTCTACATCCTCTACTCCGCC---------------TGG------TTC---GGTGAGGCAAAGACGCTGGCTGCTTCC------AGC---AACTCAGCCGCTGTT---GCC---AAG---GGT---ATC---AAT---GCCCTT---GCCTGGTTCGTGCTGGTG---------------------------------------------------------------GGATGG---------GCTATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------MVAATA-FFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYA-----------------STGKTPVALRYIDW--------TLTVPLMCLEFYLLLKP---A--GAKS-SF------------MWK-LIAASVLMLVAGYIGE---A------F--TD-----------G------P---T---------AHS------VRW-GVIATIGYVYILYSA-----W--F-GEAKTLAAS--S-NSAAV-A-K-G-I-N-AL-AWFVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env1-c]_EF079852 [unk-env1-c] clone_ID11032_EF079852 gi|126361793|gb|EF079852| Uncultured bacterium clone ID11032 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID11032 putative proteorhodopsin gene, partial cds. EF079852 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na #na Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGCTCGCCGCTACTGCATTCTTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCACTACTATTACATGCGCGACTATTATGCCTCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGGACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCGGCAGGTGCGAAGTCCTCCTTCATGTGGAAGCTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAGGCCTTCACGGACGGCTCCACCGCCCATTCTGTCAAGTGGGGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCCTGGTTCGGTGAGGCAAAGACGCTGGCTGCTTCCAGCAACTCAGCCGCTGTTGCCAAGGGTATCAATGCCCTTGCCTGGTTCGTGCTGGTGGGGTGGGCCATATATCCA MLAATAFFFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYASTGKTPVALRYIDWTLTVPLMCLEFYLLLKPAGAKSSFMWKLIAASVLMLVAGYIGEAFTDGSTAHSVKWGVISTIGYVYILYSAWFGEAKTLAASSNSAAVAKGINALAWFVLVGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTCGCCGCTACTGCATTCTTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCACTACTATTACATGCGCGACTATTATGCC---------------------------------------------------TCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGG------------------------ACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCG---------GCA------GGTGCGAAGTCC---TCCTTC------------------------------------ATGTGGAAG---CTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAG---------GCC------------------TTC------ACGGAC---------------------------------GGC------------------TCC---------ACC---------------------------GCCCATTCT------------------GTCAAGTGG---GGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCC---------------TGG------TTC---GGTGAGGCAAAGACGCTGGCTGCTTCC------AGC---AACTCAGCCGCTGTT---GCC---AAG---GGT---ATC---AAT---GCCCTT---GCCTGGTTCGTGCTGGTG---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYA-----------------STGKTPVALRYIDW--------TLTVPLMCLEFYLLLKP---A--GAKS-SF------------MWK-LIAASVLMLVAGYIGE---A------F--TD-----------G------S---T---------AHS------VKW-GVISTIGYVYILYSA-----W--F-GEAKTLAAS--S-NSAAV-A-K-G-I-N-AL-AWFVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env1-c]_EU915809 [unk-env1-c] PF92013_env_samples_EU915809 gi|229358500|gb|EU915809| Uncultured microorganism clone PF92013 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF92013 putative proteorhodopsin gene, partial cds EU915809 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTCGCCGCTACTGTATTCTTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATCGCGGCCGTGCATTACTATTACATGCGCGACTATTATGCCTCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGGACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCGGCAGGTGCGAAGTCCTCCTTCATGTGGAAGCTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAGGCCTTCACGGACGGCTCCACCGCCCATTCTGTCAAGTGGGGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCCTGGTTCGGTGAGGCAAAGACGCTGGCTGCTTCCAGCAACTCAGCCGCTGTTGCCAAGGGTATCAATGCCCTTGCCCGGTTCGTGCTGGTGGGGTGGGCTATCTAT MVAATVFFFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYASTGKTPVALRYIDWTLTVPLMCLEFYLLLKPAGAKSSFMWKLIAASVLMLVAGYIGEAFTDGSTAHSVKWGVISTIGYVYILYSAWFGEAKTLAASSNSAAVAKGINALARFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCCGCTACTGTATTCTTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATCGCGGCCGTGCATTACTATTACATGCGCGACTATTATGCC---------------------------------------------------TCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGG------------------------ACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCG---------GCA------GGTGCGAAGTCC---TCCTTC------------------------------------ATGTGGAAG---CTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAG---------GCC------------------TTC------ACGGAC---------------------------------GGC------------------TCC---------ACC---------------------------GCCCATTCT------------------GTCAAGTGG---GGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCC---------------TGG------TTC---GGTGAGGCAAAGACGCTGGCTGCTTCC------AGC---AACTCAGCCGCTGTT---GCC---AAG---GGT---ATC---AAT---GCCCTT---GCCCGGTTCGTGCTGGTG---------------------------------------------------------------GGGTGG---------GCTATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYA-----------------STGKTPVALRYIDW--------TLTVPLMCLEFYLLLKP---A--GAKS-SF------------MWK-LIAASVLMLVAGYIGE---A------F--TD-----------G------S---T---------AHS------VKW-GVISTIGYVYILYSA-----W--F-GEAKTLAAS--S-NSAAV-A-K-G-I-N-AL-ARFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env1-c]_EU915796 [unk-env1-c] PF92065_env_samples_EU915796 gi|229358474|gb|EU915796| Uncultured microorganism clone PF92065 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF92065 putative proteorhodopsin gene, partial cds EU915796 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTATTAGCGTCTACTGTATTCTTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGGAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCCTCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGGACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCGGCAGGTGCGAAGTCCTCCTTCATGTGGAAGCTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAGGCCTCCACGGACGGCTCCACCGCCCATTCTGCCAAGTGGGGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCCTGGTTCGGTGAGGCAAAGACGCTGGCTGCTTCCAGCAACTCAGCCGCTGTTGCCAAGGGTATCAATGCCCTTGCCTGGTTCGTGCTGGTGGGATGGGCTATCTAT LLASTVFFFFERGQVDGKWETSLLVSGLITGIAAVHYYYMRDYYASTGKTPVALRYIDWTLTVPLMCLEFYLLLKPAGAKSSFMWKLIAASVLMLVAGYIGEASTDGSTAHSAKWGVISTIGYVYILYSAWFGEAKTLAASSNSAAVAKGINALAWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGTCTACTGTATTCTTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGGAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCC---------------------------------------------------TCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGG------------------------ACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCG---------GCA------GGTGCGAAGTCC---TCCTTC------------------------------------ATGTGGAAG---CTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAG---------GCC------------------TCC------ACGGAC---------------------------------GGC------------------TCC---------ACC---------------------------GCCCATTCT------------------GCCAAGTGG---GGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCC---------------TGG------TTC---GGTGAGGCAAAGACGCTGGCTGCTTCC------AGC---AACTCAGCCGCTGTT---GCC---AAG---GGT---ATC---AAT---GCCCTT---GCCTGGTTCGTGCTGGTG---------------------------------------------------------------GGATGG---------GCTATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LLASTVFFFFERGQVDGKWETSLLVSGLITGIAAVHYYYMRDYYA-----------------STGKTPVALRYIDW--------TLTVPLMCLEFYLLLKP---A--GAKS-SF------------MWK-LIAASVLMLVAGYIGE---A------S--TD-----------G------S---T---------AHS------AKW-GVISTIGYVYILYSA-----W--F-GEAKTLAAS--S-NSAAV-A-K-G-I-N-AL-AWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env1-c]_EU915784 [unk-env1-c] PF97541_env_samples_EU915784 gi|229358450|gb|EU915784| Uncultured microorganism clone PF97541 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF97541 putative proteorhodopsin gene, partial cds EU915784 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na GTATTAGCGGCTACTGTATTCTTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCCTCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGGACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCGGCAGGTGCGAAGTCCTCCTTCATGTGGAAGCTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAGGCCTTCACGGACGGCTCCACCGCCCATTCTGTCAAGTGGGGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCCTGGTTCGGTGAGGCAAAGACGCTGGCTGCTTCCAGCAACTCAGCCGCTGTTGCCAAGGGTATCAATGCCCTTGCCTGGTTCGTGCTGGTGGGGTGGGCTATTTAT VLAATVFFFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYASTGKTPVALRYIDWTLTVPLMCLEFYLLLKPAGAKSSFMWKLIAASVLMLVAGYIGEAFTDGSTAHSVKWGVISTIGYVYILYSAWFGEAKTLAASSNSAAVAKGINALAWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGGCTACTGTATTCTTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCC---------------------------------------------------TCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGG------------------------ACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCG---------GCA------GGTGCGAAGTCC---TCCTTC------------------------------------ATGTGGAAG---CTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAG---------GCC------------------TTC------ACGGAC---------------------------------GGC------------------TCC---------ACC---------------------------GCCCATTCT------------------GTCAAGTGG---GGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCC---------------TGG------TTC---GGTGAGGCAAAGACGCTGGCTGCTTCC------AGC---AACTCAGCCGCTGTT---GCC---AAG---GGT---ATC---AAT---GCCCTT---GCCTGGTTCGTGCTGGTG---------------------------------------------------------------GGGTGG---------GCTATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------VLAATVFFFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYA-----------------STGKTPVALRYIDW--------TLTVPLMCLEFYLLLKP---A--GAKS-SF------------MWK-LIAASVLMLVAGYIGE---A------F--TD-----------G------S---T---------AHS------VKW-GVISTIGYVYILYSA-----W--F-GEAKTLAAS--S-NSAAV-A-K-G-I-N-AL-AWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env1-c]_DQ887779 [unk-env1-c] clone_PF10003_DQ887779 gi|116294258|gb|DQ887779| Uncultured bacterium clone PF10003 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone PF10003 putative proteorhodopsin gene, partial cds. DQ887779 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2007 #na surface water Pacific Ocean marine #na Proteorhodopsin diversity Wei,B. and Jiao,N.Z. Unpublished #na #na CTATTAGCGGCTACTGTATTCTTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCCTCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGGACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCGGCAGGTGCGAAGTCCTCCTTCATGTGGAAGCTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAGGCCTTCACGGACGGCTCCACCGCCCATTCTGTCAAGTGGGGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCCTGGTTCGGTGAGGCAAAGACGCTGGCTGCTTCCAGCAACTCAGCCGCTGTTGCCAAGGGTATCAATGCCCTTGCCTGGTTCGTGCTGGTGGGGTGGGCGATCTACCCA LLAATVFFFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYASTGKTPVALRYIDWTLTVPLMCLEFYLLLKPAGAKSSFMWKLIAASVLMLVAGYIGEAFTDGSTAHSVKWGVISTIGYVYILYSAWFGEAKTLAASSNSAAVAKGINALAWFVLVGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCC---------------------------------------------------TCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGG------------------------ACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCG---------GCA------GGTGCGAAGTCC---TCCTTC------------------------------------ATGTGGAAG---CTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAG---------GCC------------------TTC------ACGGAC---------------------------------GGC------------------TCC---------ACC---------------------------GCCCATTCT------------------GTCAAGTGG---GGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCC---------------TGG------TTC---GGTGAGGCAAAGACGCTGGCTGCTTCC------AGC---AACTCAGCCGCTGTT---GCC---AAG---GGT---ATC---AAT---GCCCTT---GCCTGGTTCGTGCTGGTG---------------------------------------------------------------GGGTGG---------GCGATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYA-----------------STGKTPVALRYIDW--------TLTVPLMCLEFYLLLKP---A--GAKS-SF------------MWK-LIAASVLMLVAGYIGE---A------F--TD-----------G------S---T---------AHS------VKW-GVISTIGYVYILYSA-----W--F-GEAKTLAAS--S-NSAAV-A-K-G-I-N-AL-AWFVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env1-c]_EU915914 [unk-env1-c] clone_NMC11_EU915914 gi|229358710|gb|EU915914| Uncultured bacterium clone NMC11 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone NMC11 putative proteorhodopsin gene, partial cds. EU915914 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTATTAGCGTCTACTGTATTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCACCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCCTCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGGACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCGGCAGGTGCGAAGTCCTCCTTCATGTGGAAGCTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAGGCCTTCACGGACGGCTCCACCGCCCATTCTGTCAAGTGGGGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCCTGGTTCGGTGAGGCAAAGACGCTGGCTGCTTCCAGCAACTCAGCCGCTGTTGCCAAGGGTATCAATGCCCTTGCCTGGTTCGTGCTGGTGGGATGGGCGATTTAC LLASTVFFFERGQVDGKWKTSLLVSGLTTGIAAVHYYYMRDYYASTGKTPVALRYIDWTLTVPLMCLEFYLLLKPAGAKSSFMWKLIAASVLMLVAGYIGEAFTDGSTAHSVKWGVISTIGYVYILYSAWFGEAKTLAASSNSAAVAKGINALAWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGTCTACTGTA---TTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCACCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCC---------------------------------------------------TCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGG------------------------ACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCG---------GCA------GGTGCGAAGTCC---TCCTTC------------------------------------ATGTGGAAG---CTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAG---------GCC------------------TTC------ACGGAC---------------------------------GGC------------------TCC---------ACC---------------------------GCCCATTCT------------------GTCAAGTGG---GGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCC---------------TGG------TTC---GGTGAGGCAAAGACGCTGGCTGCTTCC------AGC---AACTCAGCCGCTGTT---GCC---AAG---GGT---ATC---AAT---GCCCTT---GCCTGGTTCGTGCTGGTG---------------------------------------------------------------GGATGG---------GCGATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LLASTV-FFFERGQVDGKWKTSLLVSGLTTGIAAVHYYYMRDYYA-----------------STGKTPVALRYIDW--------TLTVPLMCLEFYLLLKP---A--GAKS-SF------------MWK-LIAASVLMLVAGYIGE---A------F--TD-----------G------S---T---------AHS------VKW-GVISTIGYVYILYSA-----W--F-GEAKTLAAS--S-NSAAV-A-K-G-I-N-AL-AWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env1-c]_EU915915 [unk-env1-c] clone_NMC12_EU915915 gi|229358712|gb|EU915915| Uncultured bacterium clone NMC12 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone NMC12 putative proteorhodopsin gene, partial cds. EU915915 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTATTAGCGGCTACTGTATTCTTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCCTCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGGACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCGGCAGGTGCGAAGTCCTCCTTCATGTGGAAGCTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAGGCCTTCACGGACGGCTCCACCGCCCATTCTGTCAAGTGGGGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCCTGGTTCGGTGAGGCAAAGACGCTGGCTGCTTCCAGCAACTCAGCCGCTGTTGCCAAGGGTATCAATGCCCTTGCCTGGTTCGTGCTGGTGGGGTGGGCCATCTAC LLAATVFFFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYASTGKTPVALRYIDWTLTVPLMCLEFYLLLKPAGAKSSFMWKLIAASVLMLVAGYIGEAFTDGSTAHSVKWGVISTIGYVYILYSAWFGEAKTLAASSNSAAVAKGINALAWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCC---------------------------------------------------TCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGG------------------------ACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCG---------GCA------GGTGCGAAGTCC---TCCTTC------------------------------------ATGTGGAAG---CTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAG---------GCC------------------TTC------ACGGAC---------------------------------GGC------------------TCC---------ACC---------------------------GCCCATTCT------------------GTCAAGTGG---GGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCC---------------TGG------TTC---GGTGAGGCAAAGACGCTGGCTGCTTCC------AGC---AACTCAGCCGCTGTT---GCC---AAG---GGT---ATC---AAT---GCCCTT---GCCTGGTTCGTGCTGGTG---------------------------------------------------------------GGGTGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYA-----------------STGKTPVALRYIDW--------TLTVPLMCLEFYLLLKP---A--GAKS-SF------------MWK-LIAASVLMLVAGYIGE---A------F--TD-----------G------S---T---------AHS------VKW-GVISTIGYVYILYSA-----W--F-GEAKTLAAS--S-NSAAV-A-K-G-I-N-AL-AWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env1-c]_EU916067 [unk-env1-c] clone_A150017_EU916067 gi|229359015|gb|EU916067| Uncultured bacterium clone A150017 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A150017 putative proteorhodopsin gene, partial cds. EU916067 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na GTATTAGCGGCTACTGTATTCTTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCCTCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGGACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCGGCAGGTGCGAAGTCCTCCTTCATGTGGAAGCTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAGGCCTTCACGGACGGCTCCACCGCCCATTCTGTCAAGTGGGGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCCTGGTTCGGTGAGGCAAAGACGCTGGCTGCTTCCAGCAACTCAGCCGCTGTTGCCAAGGGTATCAATGCCCTTGCCTGGTTCGTACTGGTGGGGTGGGCCATCTAC VLAATVFFFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYASTGKTPVALRYIDWTLTVPLMCLEFYLLLKPAGAKSSFMWKLIAASVLMLVAGYIGEAFTDGSTAHSVKWGVISTIGYVYILYSAWFGEAKTLAASSNSAAVAKGINALAWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGGCTACTGTATTCTTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCC---------------------------------------------------TCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGG------------------------ACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCG---------GCA------GGTGCGAAGTCC---TCCTTC------------------------------------ATGTGGAAG---CTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAG---------GCC------------------TTC------ACGGAC---------------------------------GGC------------------TCC---------ACC---------------------------GCCCATTCT------------------GTCAAGTGG---GGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCC---------------TGG------TTC---GGTGAGGCAAAGACGCTGGCTGCTTCC------AGC---AACTCAGCCGCTGTT---GCC---AAG---GGT---ATC---AAT---GCCCTT---GCCTGGTTCGTACTGGTG---------------------------------------------------------------GGGTGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------VLAATVFFFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYA-----------------STGKTPVALRYIDW--------TLTVPLMCLEFYLLLKP---A--GAKS-SF------------MWK-LIAASVLMLVAGYIGE---A------F--TD-----------G------S---T---------AHS------VKW-GVISTIGYVYILYSA-----W--F-GEAKTLAAS--S-NSAAV-A-K-G-I-N-AL-AWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env1-c]_EU916058 [unk-env1-c] clone_A150046_EU916058 gi|229358997|gb|EU916058| Uncultured bacterium clone A150046 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A150046 putative proteorhodopsin gene, partial cds. EU916058 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na TTATTAGCGTCTACTGTATTCTTCTTCTTCGAGAGGGGTCAGGCCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCCTCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGGACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCGGCAGGTGCGAAGTCCTCCTTCATGTGGAAGCTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAGGCCTTCACGGACGGCTCCACCGCCCATTCTGTCAAGTGGGGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCCTGGTTCGGTGAGGCAAAGACGCTGGCTGCTTCCAGCAACTCAGCCGCTGTTGCCGAGGGTATCAATGCCCTTGCCTGGTTCGTGTTGGTGGGGTGGGCAATATAC LLASTVFFFFERGQADGKWKTSLLVSGLITGIAAVHYYYMRDYYASTGKTPVALRYIDWTLTVPLMCLEFYLLLKPAGAKSSFMWKLIAASVLMLVAGYIGEAFTDGSTAHSVKWGVISTIGYVYILYSAWFGEAKTLAASSNSAAVAEGINALAWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAGCGTCTACTGTATTCTTCTTCTTCGAGAGGGGTCAGGCCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCC---------------------------------------------------TCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGG------------------------ACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCG---------GCA------GGTGCGAAGTCC---TCCTTC------------------------------------ATGTGGAAG---CTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAG---------GCC------------------TTC------ACGGAC---------------------------------GGC------------------TCC---------ACC---------------------------GCCCATTCT------------------GTCAAGTGG---GGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCC---------------TGG------TTC---GGTGAGGCAAAGACGCTGGCTGCTTCC------AGC---AACTCAGCCGCTGTT---GCC---GAG---GGT---ATC---AAT---GCCCTT---GCCTGGTTCGTGTTGGTG---------------------------------------------------------------GGGTGG---------GCAATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LLASTVFFFFERGQADGKWKTSLLVSGLITGIAAVHYYYMRDYYA-----------------STGKTPVALRYIDW--------TLTVPLMCLEFYLLLKP---A--GAKS-SF------------MWK-LIAASVLMLVAGYIGE---A------F--TD-----------G------S---T---------AHS------VKW-GVISTIGYVYILYSA-----W--F-GEAKTLAAS--S-NSAAV-A-E-G-I-N-AL-AWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env1-c]_EU915917 [unk-env1-c] clone_NMC15_EU915917 gi|229358716|gb|EU915917| Uncultured bacterium clone NMC15 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone NMC15 putative proteorhodopsin gene, partial cds. EU915917 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na GTATTAGCGGCTACTGTATTCTTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCCTCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGGACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCGGCAGGTGCGAAGTCCTCCTTCATGTGGAAGCTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAGGCCTTCACGGACGGCTCCACCGCCCATTCTGTCAAGTGGGGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCCTGGTTCGGTGAGGCAAAGACGCTGGCTGCTTCCAGCAACTCAGCCGCTGTTGCCAAGGGTATCAATGCCCTTGCCTGGTTCGTGCTGGTGGGCTGGGCAATTTAC VLAATVFFFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYASTGKTPVALRYIDWTLTVPLMCLEFYLLLKPAGAKSSFMWKLIAASVLMLVAGYIGEAFTDGSTAHSVKWGVISTIGYVYILYSAWFGEAKTLAASSNSAAVAKGINALAWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGGCTACTGTATTCTTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCC---------------------------------------------------TCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGG------------------------ACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCG---------GCA------GGTGCGAAGTCC---TCCTTC------------------------------------ATGTGGAAG---CTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAG---------GCC------------------TTC------ACGGAC---------------------------------GGC------------------TCC---------ACC---------------------------GCCCATTCT------------------GTCAAGTGG---GGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCC---------------TGG------TTC---GGTGAGGCAAAGACGCTGGCTGCTTCC------AGC---AACTCAGCCGCTGTT---GCC---AAG---GGT---ATC---AAT---GCCCTT---GCCTGGTTCGTGCTGGTG---------------------------------------------------------------GGCTGG---------GCAATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------VLAATVFFFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYA-----------------STGKTPVALRYIDW--------TLTVPLMCLEFYLLLKP---A--GAKS-SF------------MWK-LIAASVLMLVAGYIGE---A------F--TD-----------G------S---T---------AHS------VKW-GVISTIGYVYILYSA-----W--F-GEAKTLAAS--S-NSAAV-A-K-G-I-N-AL-AWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env1-c]_EU915916 [unk-env1-c] clone_NMC14_EU915916 gi|229358714|gb|EU915916| Uncultured bacterium clone NMC14 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone NMC14 putative proteorhodopsin gene, partial cds. EU915916 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na GTATTAGCGGCTACTGTATTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCCTCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGGACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCGGCAGGTGCGAAGTCCTCCTTCATGTGGAAGCTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAGGCCTTCACGGACGGCTCCACCGCCCATTCTGTCAAGTGGGGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCCTGGCTCGGTGAGGCAAAGACGCTGGCTGCTTCCAGCAACTCAGCCGCTGTTGCCAAGGGTATCAATGCCCTTGCCTGGTTCGTGCTGGTGGGGTGGGCC VLAATVFFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYASTGKTPVALRYIDWTLTVPLMCLEFYLLLKPAGAKSSFMWKLIAASVLMLVAGYIGEAFTDGSTAHSVKWGVISTIGYVYILYSAWLGEAKTLAASSNSAAVAKGINALAWFVLVGWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAGCGGCTACTGTA---TTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCC---------------------------------------------------TCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGG------------------------ACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCG---------GCA------GGTGCGAAGTCC---TCCTTC------------------------------------ATGTGGAAG---CTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAG---------GCC------------------TTC------ACGGAC---------------------------------GGC------------------TCC---------ACC---------------------------GCCCATTCT------------------GTCAAGTGG---GGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCC---------------TGG------CTC---GGTGAGGCAAAGACGCTGGCTGCTTCC------AGC---AACTCAGCCGCTGTT---GCC---AAG---GGT---ATC---AAT---GCCCTT---GCCTGGTTCGTGCTGGTG---------------------------------------------------------------GGGTGG---------GCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------VLAATV-FFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYA-----------------STGKTPVALRYIDW--------TLTVPLMCLEFYLLLKP---A--GAKS-SF------------MWK-LIAASVLMLVAGYIGE---A------F--TD-----------G------S---T---------AHS------VKW-GVISTIGYVYILYSA-----W--L-GEAKTLAAS--S-NSAAV-A-K-G-I-N-AL-AWFVLV---------------------GW---A----------------------------------------------------------------------------------------------------- [unk-env1-c]_EU915791 [unk-env1-c] PF97506_env_samples_EU915791 gi|229358464|gb|EU915791| Uncultured microorganism clone PF97506 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF97506 putative proteorhodopsin gene, partial cds EU915791 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTAGCCGCTACTGTATTCTTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCCTCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGGACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCGGCAGGTGCGAAGTCCTCCTTCATGTGGAAGCTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAGGCCTTCACGGACGGCTCCACCGCCCATTCTGTCAAGTGGGGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCCTGGTTCGGTGAGGCAAAGACGCTGGCTGCTTCCAGCAACTCAGCCGCTGTTGCCAAGGGTATCAATGCCCTTGCCTGGTTCGTGCTGGTGGGCTGGGCTATTTAC MVAATVFFFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYASTGKTPVALRYIDWTLTVPLMCLEFYLLLKPAGAKSSFMWKLIAASVLMLVAGYIGEAFTDGSTAHSVKWGVISTIGYVYILYSAWFGEAKTLAASSNSAAVAKGINALAWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTATTCTTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCC---------------------------------------------------TCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGG------------------------ACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCG---------GCA------GGTGCGAAGTCC---TCCTTC------------------------------------ATGTGGAAG---CTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAG---------GCC------------------TTC------ACGGAC---------------------------------GGC------------------TCC---------ACC---------------------------GCCCATTCT------------------GTCAAGTGG---GGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCC---------------TGG------TTC---GGTGAGGCAAAGACGCTGGCTGCTTCC------AGC---AACTCAGCCGCTGTT---GCC---AAG---GGT---ATC---AAT---GCCCTT---GCCTGGTTCGTGCTGGTG---------------------------------------------------------------GGCTGG---------GCTATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYA-----------------STGKTPVALRYIDW--------TLTVPLMCLEFYLLLKP---A--GAKS-SF------------MWK-LIAASVLMLVAGYIGE---A------F--TD-----------G------S---T---------AHS------VKW-GVISTIGYVYILYSA-----W--F-GEAKTLAAS--S-NSAAV-A-K-G-I-N-AL-AWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env1-c]_EU915842 [unk-env1-c] PF12037_env_samples_EU915842 gi|229358566|gb|EU915842| Uncultured microorganism clone PF12037 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF12037 putative proteorhodopsin gene, partial cds EU915842 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTCGCCGCTACTGTTTTCTTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCCTCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTTGACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCGGCAGGTGCGAAGTCCTCCTTCATGTGGAAGCTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAGGCCTTCACGGACGGCTCCACCGCCCATTCTGTCAAGTGGGGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCCTGGTTCGGTGAGGCAAAGACGCTGGCTGCTTCCAGCAACTCAGCCGCTGTTGCCAAGGGTATCAATGCCCTTGCCTGGTTCGTGCTGGTGGGGTGGGCTATTTAC MVAATVFFFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYASTGKTPVALRYIDLTLTVPLMCLEFYLLLKPAGAKSSFMWKLIAASVLMLVAGYIGEAFTDGSTAHSVKWGVISTIGYVYILYSAWFGEAKTLAASSNSAAVAKGINALAWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCCGCTACTGTTTTCTTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCC---------------------------------------------------TCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTTG------------------------ACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCG---------GCA------GGTGCGAAGTCC---TCCTTC------------------------------------ATGTGGAAG---CTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAG---------GCC------------------TTC------ACGGAC---------------------------------GGC------------------TCC---------ACC---------------------------GCCCATTCT------------------GTCAAGTGG---GGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCC---------------TGG------TTC---GGTGAGGCAAAGACGCTGGCTGCTTCC------AGC---AACTCAGCCGCTGTT---GCC---AAG---GGT---ATC---AAT---GCCCTT---GCCTGGTTCGTGCTGGTG---------------------------------------------------------------GGGTGG---------GCTATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYA-----------------STGKTPVALRYIDL--------TLTVPLMCLEFYLLLKP---A--GAKS-SF------------MWK-LIAASVLMLVAGYIGE---A------F--TD-----------G------S---T---------AHS------VKW-GVISTIGYVYILYSA-----W--F-GEAKTLAAS--S-NSAAV-A-K-G-I-N-AL-AWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env1-c]_EU915844 [unk-env1-c] PF12039_env_samples_EU915844 gi|229358570|gb|EU915844| Uncultured microorganism clone PF12039 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF12039 putative proteorhodopsin gene, partial cds EU915844 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTAGCCGCTACTGTTTTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCCTCAACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGGACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCGGCAGGTGCGAAGTCCTCCTTCATGTGGAAGCTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAGGCCTTCACGGACGGCTCCACCGCCCATTCTGTCAAGTGGGGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCCTGGTTCGGTGAGGCAAAGACGCTGGCTGCTTCCAGCAACTCAGCCGCTGTTGCCAAGGGTATCAATGCCCTTGCCTGGTTCGTGCTGGTGGGGTGGGCCATTTAC MVAATVFFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYASTGKTPVALRYIDWTLTVPLMCLEFYLLLKPAGAKSSFMWKLIAASVLMLVAGYIGEAFTDGSTAHSVKWGVISTIGYVYILYSAWFGEAKTLAASSNSAAVAKGINALAWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTT---TTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCC---------------------------------------------------TCAACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGG------------------------ACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCG---------GCA------GGTGCGAAGTCC---TCCTTC------------------------------------ATGTGGAAG---CTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAG---------GCC------------------TTC------ACGGAC---------------------------------GGC------------------TCC---------ACC---------------------------GCCCATTCT------------------GTCAAGTGG---GGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCC---------------TGG------TTC---GGTGAGGCAAAGACGCTGGCTGCTTCC------AGC---AACTCAGCCGCTGTT---GCC---AAG---GGT---ATC---AAT---GCCCTT---GCCTGGTTCGTGCTGGTG---------------------------------------------------------------GGGTGG---------GCCATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MVAATV-FFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYA-----------------STGKTPVALRYIDW--------TLTVPLMCLEFYLLLKP---A--GAKS-SF------------MWK-LIAASVLMLVAGYIGE---A------F--TD-----------G------S---T---------AHS------VKW-GVISTIGYVYILYSA-----W--F-GEAKTLAAS--S-NSAAV-A-K-G-I-N-AL-AWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env1-c]_EU915830 [unk-env1-c] PF12086_env_samples_EU915830 gi|229358542|gb|EU915830| Uncultured microorganism clone PF12086 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF12086 putative proteorhodopsin gene, partial cds EU915830 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTAGCCGCTACTGTATTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCCTCAACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGGACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCGGCAGGTGCGAAGTCCTCCTTCATGTGGAAGCTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAGGCCTTCACGGACGGCTCCACCGCCCATTCTGTCAAGTGGGGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCCCGGTTCGGTGAGGCAAAGACGCTGGCTGCTTCCAGCAACTCAGCCGCTGTTGCCAAGGGTATCAATGCCCTTGCCTGGTTCGTGCTGGTGGGGTGGGCCATTTAC MVAATVFFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYASTGKTPVALRYIDWTLTVPLMCLEFYLLLKPAGAKSSFMWKLIAASVLMLVAGYIGEAFTDGSTAHSVKWGVISTIGYVYILYSARFGEAKTLAASSNSAAVAKGINALAWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTA---TTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCC---------------------------------------------------TCAACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGG------------------------ACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCG---------GCA------GGTGCGAAGTCC---TCCTTC------------------------------------ATGTGGAAG---CTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAG---------GCC------------------TTC------ACGGAC---------------------------------GGC------------------TCC---------ACC---------------------------GCCCATTCT------------------GTCAAGTGG---GGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCC---------------CGG------TTC---GGTGAGGCAAAGACGCTGGCTGCTTCC------AGC---AACTCAGCCGCTGTT---GCC---AAG---GGT---ATC---AAT---GCCCTT---GCCTGGTTCGTGCTGGTG---------------------------------------------------------------GGGTGG---------GCCATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MVAATV-FFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYA-----------------STGKTPVALRYIDW--------TLTVPLMCLEFYLLLKP---A--GAKS-SF------------MWK-LIAASVLMLVAGYIGE---A------F--TD-----------G------S---T---------AHS------VKW-GVISTIGYVYILYSA-----R--F-GEAKTLAAS--S-NSAAV-A-K-G-I-N-AL-AWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env1-c]_EF088594 [unk-env1-c] E400010_env_samples_EF088594 gi|126843429|gb|EF088594| Uncultured bacterium clone E400010 putative proteorhodopsin gene, partial cds Uncultured bacterium clone E400010 putative proteorhodopsin gene, partial cds EF088594 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na Bering_Sea_surface_water_sample Arctic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTGGCCGCTACTGTTTTCTTCTGGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGCCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCCTCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGGACGCTGACGGTTCCCCTGATGCGCCTGGAGTTCTATCTGCTGCTGAAGCCGGCAGGTGCGAAGTCCTCCTTCATGTGGAAGCTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAGGCCTTCACGGACGGCTCCACCGCCCATTCTGTCAAGTGGGGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCCTGGTTCGGTGAGGCAAAGACGCTGGCTGCTTCCAGCAACTCAGCCGCTGTTGCCAAGGGTATCAATGCCCTTGCCTGGTTCGTGCTGGTGGGGTGGGCGATTTACCCA MVAATVFFWRGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYASTGKTPVALRYIDWTLTVPLMRLEFYLLLKPAGAKSSFMWKLIAASVLMLVAGYIGEAFTDGSTAHSVKWGVISTIGYVYILYSAWFGEAKTLAASSNSAAVAKGINALAWFVLVGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTT---TTCTTCTGG---AGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGCCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCC---------------------------------------------------TCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGG------------------------ACGCTGACGGTTCCCCTGATGCGCCTGGAGTTCTATCTGCTGCTGAAGCCG---------GCA------GGTGCGAAGTCC---TCCTTC------------------------------------ATGTGGAAG---CTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAG---------GCC------------------TTC------ACGGAC---------------------------------GGC------------------TCC---------ACC---------------------------GCCCATTCT------------------GTCAAGTGG---GGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCC---------------TGG------TTC---GGTGAGGCAAAGACGCTGGCTGCTTCC------AGC---AACTCAGCCGCTGTT---GCC---AAG---GGT---ATC---AAT---GCCCTT---GCCTGGTTCGTGCTGGTG---------------------------------------------------------------GGGTGG---------GCGATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------MVAATV-FFW-RGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYA-----------------STGKTPVALRYIDW--------TLTVPLMRLEFYLLLKP---A--GAKS-SF------------MWK-LIAASVLMLVAGYIGE---A------F--TD-----------G------S---T---------AHS------VKW-GVISTIGYVYILYSA-----W--F-GEAKTLAAS--S-NSAAV-A-K-G-I-N-AL-AWFVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env1-c]_EU915919 [unk-env1-c] clone_NMC10_EU915919 gi|229358720|gb|EU915919| Uncultured bacterium clone NMC10 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone NMC10 putative proteorhodopsin gene, partial cds. EU915919 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGTGTTCTTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCAACTATTATGCCTCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGGACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCGGCAGGTGCGAAGTCCTCCTCCATGTGGAAGCTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAGGCCTTCACGAACGGCTCCACCGCCCATTCTGTCAAGTGGGGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCCTGGTTCGGTGAGGCAAAGACGCTGGCTGCTTCCAGCAACTCAGCCGCTGTTGCCAAGGGTATCAATGCCCTTGCCTGGTTCGTGCTGGTGGGGTGGGCCATTTAC MVAATVFFFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRNYYASTGKTPVALRYIDWTLTVPLMCLEFYLLLKPAGAKSSSMWKLIAASVLMLVAGYIGEAFTNGSTAHSVKWGVISTIGYVYILYSAWFGEAKTLAASSNSAAVAKGINALAWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTGTTCTTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCAACTATTATGCC---------------------------------------------------TCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGG------------------------ACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCG---------GCA------GGTGCGAAGTCC---TCCTCC------------------------------------ATGTGGAAG---CTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAG---------GCC------------------TTC------ACGAAC---------------------------------GGC------------------TCC---------ACC---------------------------GCCCATTCT------------------GTCAAGTGG---GGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCC---------------TGG------TTC---GGTGAGGCAAAGACGCTGGCTGCTTCC------AGC---AACTCAGCCGCTGTT---GCC---AAG---GGT---ATC---AAT---GCCCTT---GCCTGGTTCGTGCTGGTG---------------------------------------------------------------GGGTGG---------GCCATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRNYYA-----------------STGKTPVALRYIDW--------TLTVPLMCLEFYLLLKP---A--GAKS-SS------------MWK-LIAASVLMLVAGYIGE---A------F--TN-----------G------S---T---------AHS------VKW-GVISTIGYVYILYSA-----W--F-GEAKTLAAS--S-NSAAV-A-K-G-I-N-AL-AWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env1-c]_EF079840 [unk-env1-c] clone_ID11011_EF079840 gi|126361769|gb|EF079840| Uncultured bacterium clone ID11011 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID11011 putative proteorhodopsin gene, partial cds. EF079840 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na #na Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGGTGGCCGCTACTGTGTTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCTGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCCTCAACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGGACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCGGCAGGTGCGAAGTCCTCCTTCATGTGGAAGCTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAGGCCTTCACGGACGGCTCCACCGCCCATTCTGTCAAGTGGGGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCCTGGTTCGGTGAGGCAAAGACGCTGGCTGCTTCCAGCAACTCAGCCGCTGTTGCCAAGGGTATCAATGCCCTTGCCTGGTTCGTGCTGGTGGGGTGGGCCATTTACCCA MVAATVFFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYASTGKTPVALRYIDWTLTVPLMCLEFYLLLKPAGAKSSFMWKLIAASVLMLVAGYIGEAFTDGSTAHSVKWGVISTIGYVYILYSAWFGEAKTLAASSNSAAVAKGINALAWFVLVGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTG---TTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCTGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCC---------------------------------------------------TCAACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGG------------------------ACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCG---------GCA------GGTGCGAAGTCC---TCCTTC------------------------------------ATGTGGAAG---CTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAG---------GCC------------------TTC------ACGGAC---------------------------------GGC------------------TCC---------ACC---------------------------GCCCATTCT------------------GTCAAGTGG---GGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCC---------------TGG------TTC---GGTGAGGCAAAGACGCTGGCTGCTTCC------AGC---AACTCAGCCGCTGTT---GCC---AAG---GGT---ATC---AAT---GCCCTT---GCCTGGTTCGTGCTGGTG---------------------------------------------------------------GGGTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------MVAATV-FFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYA-----------------STGKTPVALRYIDW--------TLTVPLMCLEFYLLLKP---A--GAKS-SF------------MWK-LIAASVLMLVAGYIGE---A------F--TD-----------G------S---T---------AHS------VKW-GVISTIGYVYILYSA-----W--F-GEAKTLAAS--S-NSAAV-A-K-G-I-N-AL-AWFVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env1-c]_EU915941 [unk-env1-c] clone_H015-8_EU915941 gi|229358764|gb|EU915941| Uncultured bacterium clone H015-8 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone H015-8 putative proteorhodopsin gene, partial cds. EU915941 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTTGCCGCTACTGTATTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCCTCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGGACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCGGCAGGTGCGAAGTCCTCCTTCATGTGGAAGCTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAGGCCTTCACGGACGGCTCCACCGCCCATTCTGTCAAGTGGGGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCCTGGTTCGGTGAGGCAAAGACGCTGGCTGCTTCCAGCAACTCAGCCGCTGTTGCCAAGGGTATCAATGCCCTTGCCTGGTTCGTGCTGGTGGGGTGGGCCATATAC MVAATVFFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYASTGKTPVALRYIDWTLTVPLMCLEFYLLLKPAGAKSSFMWKLIAASVLMLVAGYIGEAFTDGSTAHSVKWGVISTIGYVYILYSAWFGEAKTLAASSNSAAVAKGINALAWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTA---TTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCC---------------------------------------------------TCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGG------------------------ACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCG---------GCA------GGTGCGAAGTCC---TCCTTC------------------------------------ATGTGGAAG---CTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAG---------GCC------------------TTC------ACGGAC---------------------------------GGC------------------TCC---------ACC---------------------------GCCCATTCT------------------GTCAAGTGG---GGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCC---------------TGG------TTC---GGTGAGGCAAAGACGCTGGCTGCTTCC------AGC---AACTCAGCCGCTGTT---GCC---AAG---GGT---ATC---AAT---GCCCTT---GCCTGGTTCGTGCTGGTG---------------------------------------------------------------GGGTGG---------GCCATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MVAATV-FFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYA-----------------STGKTPVALRYIDW--------TLTVPLMCLEFYLLLKP---A--GAKS-SF------------MWK-LIAASVLMLVAGYIGE---A------F--TD-----------G------S---T---------AHS------VKW-GVISTIGYVYILYSA-----W--F-GEAKTLAAS--S-NSAAV-A-K-G-I-N-AL-AWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env1-c]_EU915831 [unk-env1-c] PF12088_env_samples_EU915831 gi|229358544|gb|EU915831| Uncultured microorganism clone PF12088 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF12088 putative proteorhodopsin gene, partial cds EU915831 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTTGCCGCTACTGTATTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCCTCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGGACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCGGCAGGTGCGAAGTCCTCCTTCATGTGGAAGCTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAGGCCTTCACGGACGGCTCCACCGCCCATTCTGTCAAGTGGGGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCCTGGTTCGGTGAGGCAAAGACGCTGGCTGCTTCCAGCAACTCAGCCGCTGTTGCCAAGGGTATCAATGCCCTTGCCTGGTTCGTGCTGGTGGGATGGGCCATTTAT MVAATVFFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYASTGKTPVALRYIDWTLTVPLMCLEFYLLLKPAGAKSSFMWKLIAASVLMLVAGYIGEAFTDGSTAHSVKWGVISTIGYVYILYSAWFGEAKTLAASSNSAAVAKGINALAWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTA---TTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCC---------------------------------------------------TCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGG------------------------ACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCG---------GCA------GGTGCGAAGTCC---TCCTTC------------------------------------ATGTGGAAG---CTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAG---------GCC------------------TTC------ACGGAC---------------------------------GGC------------------TCC---------ACC---------------------------GCCCATTCT------------------GTCAAGTGG---GGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCC---------------TGG------TTC---GGTGAGGCAAAGACGCTGGCTGCTTCC------AGC---AACTCAGCCGCTGTT---GCC---AAG---GGT---ATC---AAT---GCCCTT---GCCTGGTTCGTGCTGGTG---------------------------------------------------------------GGATGG---------GCCATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MVAATV-FFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYA-----------------STGKTPVALRYIDW--------TLTVPLMCLEFYLLLKP---A--GAKS-SF------------MWK-LIAASVLMLVAGYIGE---A------F--TD-----------G------S---T---------AHS------VKW-GVISTIGYVYILYSA-----W--F-GEAKTLAAS--S-NSAAV-A-K-G-I-N-AL-AWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env1-c]_DQ903167 [unk-env1-c] clone_HB10083_DQ903167 gi|116294063|gb|DQ903167| Uncultured bacterium clone HB10083 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone HB10083 putative proteorhodopsin gene, partial cds. DQ903167 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na East China Sea surface water (ECS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na ATGGTTGCCGCTACTGTATTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCCCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCCTCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGGACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCGGCAGGTGCGAAGTCCTCCTTCATGTGGAAGCTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAGGCCTTCACGGACGGCTCCACCGCCCATTCTGTCAAGTGGGGTGTGATCTCCACGATCGGTTATGTCTACACCCTCTACTCCGCCTGGTTCGGTGAGGCAAAGACGCTGGCTGCTTCCAGCAACTCAGCCGCTGTTGCCAAGGGTATCAATGCCCTTGCCTGGTTCGTGCTGGTGGGATGGGCAATCTATCCA MVAATVFFFERGQVDGKWKTSLLVSGPITGIAAVHYYYMRDYYASTGKTPVALRYIDWTLTVPLMCLEFYLLLKPAGAKSSFMWKLIAASVLMLVAGYIGEAFTDGSTAHSVKWGVISTIGYVYTLYSAWFGEAKTLAASSNSAAVAKGINALAWFVLVGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTA---TTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCCCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCC---------------------------------------------------TCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGG------------------------ACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCG---------GCA------GGTGCGAAGTCC---TCCTTC------------------------------------ATGTGGAAG---CTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAG---------GCC------------------TTC------ACGGAC---------------------------------GGC------------------TCC---------ACC---------------------------GCCCATTCT------------------GTCAAGTGG---GGTGTGATCTCCACGATCGGTTATGTCTACACCCTCTACTCCGCC---------------TGG------TTC---GGTGAGGCAAAGACGCTGGCTGCTTCC------AGC---AACTCAGCCGCTGTT---GCC---AAG---GGT---ATC---AAT---GCCCTT---GCCTGGTTCGTGCTGGTG---------------------------------------------------------------GGATGG---------GCAATCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------MVAATV-FFFERGQVDGKWKTSLLVSGPITGIAAVHYYYMRDYYA-----------------STGKTPVALRYIDW--------TLTVPLMCLEFYLLLKP---A--GAKS-SF------------MWK-LIAASVLMLVAGYIGE---A------F--TD-----------G------S---T---------AHS------VKW-GVISTIGYVYTLYSA-----W--F-GEAKTLAAS--S-NSAAV-A-K-G-I-N-AL-AWFVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env1-c]_EF088608 [unk-env1-c] E400053_env_samples_EF088608 gi|126843457|gb|EF088608| Uncultured bacterium clone E400053 putative proteorhodopsin gene, partial cds Uncultured bacterium clone E400053 putative proteorhodopsin gene, partial cds EF088608 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 31-oct-07 #na Bering_Sea_surface_water_sample Arctic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTGGCCGCTACTGTTTTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCACTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCCTCGACGGGCAAGACTCCTGTCGCCCTGCGCTACGTCGACTGGACGCTGACGGCTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCGGCAGGTGCGAAGTCCTCCTTCATGTGGAAGCTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAGGCCTTCACGGACGGCTCCACCGCCCATTCTGTCAAGTGGGGTGGGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCCTGGTTCGGTGAGGCAAAGACGCTGGCTGCTTCCAGCAACTCAGCCGCTGTTGCCAAGGGTATCAATGCCCTTGCCCGGTTCGTGCTGGTGGGATGGGCGATTTACCCA MVAATVFFFERGQVDGKWKTSLLVSGLITGTAAVHYYYMRDYYASTGKTPVALRYVDWTLTAPLMCLEFYLLLKPAGAKSSFMWKLIAASVLMLVAGYIGEAFTDGSTAHSVKWGGISTIGYVYILYSAWFGEAKTLAASSNSAAVAKGINALARFVLVGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTT---TTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCACTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCC---------------------------------------------------TCGACGGGCAAGACTCCTGTCGCCCTGCGCTACGTCGACTGG------------------------ACGCTGACGGCTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCG---------GCA------GGTGCGAAGTCC---TCCTTC------------------------------------ATGTGGAAG---CTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAG---------GCC------------------TTC------ACGGAC---------------------------------GGC------------------TCC---------ACC---------------------------GCCCATTCT------------------GTCAAGTGG---GGTGGGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCC---------------TGG------TTC---GGTGAGGCAAAGACGCTGGCTGCTTCC------AGC---AACTCAGCCGCTGTT---GCC---AAG---GGT---ATC---AAT---GCCCTT---GCCCGGTTCGTGCTGGTG---------------------------------------------------------------GGATGG---------GCGATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------MVAATV-FFFERGQVDGKWKTSLLVSGLITGTAAVHYYYMRDYYA-----------------STGKTPVALRYVDW--------TLTAPLMCLEFYLLLKP---A--GAKS-SF------------MWK-LIAASVLMLVAGYIGE---A------F--TD-----------G------S---T---------AHS------VKW-GGISTIGYVYILYSA-----W--F-GEAKTLAAS--S-NSAAV-A-K-G-I-N-AL-ARFVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env1-c]_EU915935 [unk-env1-c] clone_xd204_EU915935 gi|229358752|gb|EU915935| Uncultured bacterium clone xd204 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone xd204 putative proteorhodopsin gene, partial cds. EU915935 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTTGCCGCTACTGCATTCTTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCCTCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGGACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCGGCAGGTGCGAAGTCCTCCTTCATGTGGAAGCTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAGGCCTTCACGGACGGCTCCACCGCCCATTCTGTCAAGTGGGGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCCTGGTTCGGTGAGGCAAAGACGCTGGCTGCTTCCAGCAACTCAGCCGCTGTTGCCAAGGGTATCAATGCCCTTGCCTGGTTCGTGCTGGTGGGATGGGCCATCTAC MVAATAFFFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYASTGKTPVALRYIDWTLTVPLMCLEFYLLLKPAGAKSSFMWKLIAASVLMLVAGYIGEAFTDGSTAHSVKWGVISTIGYVYILYSAWFGEAKTLAASSNSAAVAKGINALAWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGCATTCTTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGCATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCC---------------------------------------------------TCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGG------------------------ACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCG---------GCA------GGTGCGAAGTCC---TCCTTC------------------------------------ATGTGGAAG---CTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAG---------GCC------------------TTC------ACGGAC---------------------------------GGC------------------TCC---------ACC---------------------------GCCCATTCT------------------GTCAAGTGG---GGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCC---------------TGG------TTC---GGTGAGGCAAAGACGCTGGCTGCTTCC------AGC---AACTCAGCCGCTGTT---GCC---AAG---GGT---ATC---AAT---GCCCTT---GCCTGGTTCGTGCTGGTG---------------------------------------------------------------GGATGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYA-----------------STGKTPVALRYIDW--------TLTVPLMCLEFYLLLKP---A--GAKS-SF------------MWK-LIAASVLMLVAGYIGE---A------F--TD-----------G------S---T---------AHS------VKW-GVISTIGYVYILYSA-----W--F-GEAKTLAAS--S-NSAAV-A-K-G-I-N-AL-AWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env1-c]_DQ903139 [unk-env1-c] clone_A1S0107_DQ903139 gi|116294007|gb|DQ903139| Uncultured bacterium clone A1S0107 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone A1S0107 putative proteorhodopsin gene, partial cds. DQ903139 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na South China Sea surface water (SCS-0m) China Sea marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Huang,S. Unpublished #na #na ATGCTAGCCGCTACTGTATTCTTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGTATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCCTCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGGACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCGGCAGGTGCGAAGTCCTCCTTCATGTGGAAGCTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAGGCCTTCACGGACGGCTCCACCGCCCATTCTGTCAAGTGGGGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCCTGGTTCGGTGAGGCAAAGACGCTGGCTGCTTCCAGCAACTCAGCCGCTGTTGCCAAGGGTATCAATGCCCTTGCCTGGTTCGTGCTGGTGGGATGGGCCATCTACCCA MLAATVFFFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYASTGKTPVALRYIDWTLTVPLMCLEFYLLLKPAGAKSSFMWKLIAASVLMLVAGYIGEAFTDGSTAHSVKWGVISTIGYVYILYSAWFGEAKTLAASSNSAAVAKGINALAWFVLVGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTAGCCGCTACTGTATTCTTCTTCTTCGAGAGGGGTCAGGTCGATGGCAAGTGGAAGACCTCCCTGCTGGTCTCCGGTCTCATCACCGGTATTGCAGCCGTGCATTACTATTACATGCGCGACTATTATGCC---------------------------------------------------TCGACGGGCAAGACGCCTGTCGCCCTGCGCTACATCGACTGG------------------------ACGCTGACGGTTCCCCTGATGTGCCTGGAGTTCTATCTGCTGCTGAAGCCG---------GCA------GGTGCGAAGTCC---TCCTTC------------------------------------ATGTGGAAG---CTGATCGCCGCCTCCGTGCTGATGCTGGTGGCCGGTTACATCGGCGAG---------GCC------------------TTC------ACGGAC---------------------------------GGC------------------TCC---------ACC---------------------------GCCCATTCT------------------GTCAAGTGG---GGTGTGATCTCCACGATCGGTTATGTCTACATCCTCTACTCCGCC---------------TGG------TTC---GGTGAGGCAAAGACGCTGGCTGCTTCC------AGC---AACTCAGCCGCTGTT---GCC---AAG---GGT---ATC---AAT---GCCCTT---GCCTGGTTCGTGCTGGTG---------------------------------------------------------------GGATGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------MLAATVFFFFERGQVDGKWKTSLLVSGLITGIAAVHYYYMRDYYA-----------------STGKTPVALRYIDW--------TLTVPLMCLEFYLLLKP---A--GAKS-SF------------MWK-LIAASVLMLVAGYIGE---A------F--TD-----------G------S---T---------AHS------VKW-GVISTIGYVYILYSA-----W--F-GEAKTLAAS--S-NSAAV-A-K-G-I-N-AL-AWFVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env1-c]_EU915922 [unk-env1-c] clone_NMC2_EU915922 gi|229358726|gb|EU915922| Uncultured bacterium clone NMC2 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone NMC2 putative proteorhodopsin gene, partial cds. EU915922 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTGGCCGCTACTGCTTTCTTCTTTATGGAGCGCAGCCGCGTCGCCGACGAGTGGAAGCTCTCGCTGTTGGTTTCTGGTTTGATCACCGGTATCGCAGCCGTGCACTACTACTACATGCGCGACTTTTACCAAGCGACCGGAACGAACCCGATCGCCCTTCGCTACATTGACTGGACCCTGACGGTTCCCTTGATGTGTGTGGAGTTTTACTTAATCACCAAAAAAGCAGGCGGCACCAGCGGTTTGCTTTGGCGCCTGATTTGGGCCTCAGTAGCCATGCTGCTGCTCGGCTACATCGGTGAGGCCTTCTACGCGGACCAAACCCAATCTTGGGTGTGGGGCGCTCTGTCAGGTCTTGCATACTTCTACATTGTATGGCTTGTTTGGAAGGGCGAGGTTGCGACCTTGGCGGCCAATGCACGCGGAATAGTTCAGACGGCCGTCAAGGCCTTGGGCTGGTTCGTACTCGTAGGTTGGGCCATATAC MLAATAFFFMERSRVADEWKLSLLVSGLITGIAAVHYYYMRDFYQATGTNPIALRYIDWTLTVPLMCVEFYLITKKAGGTSGLLWRLIWASVAMLLLGYIGEAFYADQTQSWVWGALSGLAYFYIVWLVWKGEVATLAANARGIVQTAVKALGWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGCTTTCTTCTTTATGGAGCGCAGCCGCGTCGCCGACGAGTGGAAGCTCTCGCTGTTGGTTTCTGGTTTGATCACCGGTATCGCAGCCGTGCACTACTACTACATGCGCGACTTTTACCAA---------------------------------------------------GCGACCGGAACGAACCCGATCGCCCTTCGCTACATTGACTGG------------------------ACCCTGACGGTTCCCTTGATGTGTGTGGAGTTTTACTTAATCACCAAAAAA---------GCA------GGCGGCACCAGC---GGTTTG------------------------------------CTTTGGCGC---CTGATTTGGGCCTCAGTAGCCATGCTGCTGCTCGGCTACATCGGTGAG---------GCC------------------TTC------TACGCG------------------------------------------------------GAC---------CAA---------------------------ACCCAATCT------------------TGGGTGTGG---GGCGCTCTGTCAGGTCTTGCATACTTCTACATTGTATGGCTTGTT---------------TGG------AAG---GGCGAGGTTGCGACCTTGGCGGCCAAT------GCA---CGCGGAATA---GTT---CAG---ACG---GCC---GTC---AAG---GCCTTG---GGCTGGTTCGTACTCGTA---------------------------------------------------------------GGTTGG---------GCCATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFMERSRVADEWKLSLLVSGLITGIAAVHYYYMRDFYQ-----------------ATGTNPIALRYIDW--------TLTVPLMCVEFYLITKK---A--GGTS-GL------------LWR-LIWASVAMLLLGYIGE---A------F--YA------------------D---Q---------TQS------WVW-GALSGLAYFYIVWLV-----W--K-GEVATLAAN--A-RGI-V-Q-T-A-V-K-AL-GWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env1-c]_EU915932 [unk-env1-c] clone_xd120_EU915932 gi|229358746|gb|EU915932| Uncultured bacterium clone xd120 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone xd120 putative proteorhodopsin gene, partial cds. EU915932 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTGGCCGCTACTGCTTTCTTCTTTATGGAGCGCAGCCGCGTCGCCGACGAGTGGAAGCTCTCGCTGTTGGTTTCTGGTTTGATCACCGGTATCGCAGCCGTGCACTACTACTACATGCGCGACTTTTACCAAGCGACCGGAACGAACCCGATCGCCCTTCGCTACATTGACTGGACCCTTACGGTTCCCTTGATGTGTGTGGAGTTTTACTTAATCACCAAAAAAGCAGGAGGCACCAGCGGCTTGCTTTGGCGCCTGATTTGGGCCTCAGTAGCCATGCTGCTGCTCGGCTACATCGGTGAGGCCTTCTACGCGGACCAAACCCAATCTTGGGTGTGGGGCGCTCTGTCAGGTCTTGCATACTTCTACATTGTATGGCTTGTTTGGAAGGGCGAGGTTGCGACCTTGGCGGCCAATGCAGGCGGAAAAGTTCAGACGGCCGTCAAGGCCTTGGGCTGGTTCGTACTCGTAGGTTGGGCCATCTAC MLAATAFFFMERSRVADEWKLSLLVSGLITGIAAVHYYYMRDFYQATGTNPIALRYIDWTLTVPLMCVEFYLITKKAGGTSGLLWRLIWASVAMLLLGYIGEAFYADQTQSWVWGALSGLAYFYIVWLVWKGEVATLAANAGGKVQTAVKALGWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGCTTTCTTCTTTATGGAGCGCAGCCGCGTCGCCGACGAGTGGAAGCTCTCGCTGTTGGTTTCTGGTTTGATCACCGGTATCGCAGCCGTGCACTACTACTACATGCGCGACTTTTACCAA---------------------------------------------------GCGACCGGAACGAACCCGATCGCCCTTCGCTACATTGACTGG------------------------ACCCTTACGGTTCCCTTGATGTGTGTGGAGTTTTACTTAATCACCAAAAAA---------GCA------GGAGGCACCAGC---GGCTTG------------------------------------CTTTGGCGC---CTGATTTGGGCCTCAGTAGCCATGCTGCTGCTCGGCTACATCGGTGAG---------GCC------------------TTC------TACGCG------------------------------------------------------GAC---------CAA---------------------------ACCCAATCT------------------TGGGTGTGG---GGCGCTCTGTCAGGTCTTGCATACTTCTACATTGTATGGCTTGTT---------------TGG------AAG---GGCGAGGTTGCGACCTTGGCGGCCAAT------GCA---GGCGGAAAA---GTT---CAG---ACG---GCC---GTC---AAG---GCCTTG---GGCTGGTTCGTACTCGTA---------------------------------------------------------------GGTTGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFMERSRVADEWKLSLLVSGLITGIAAVHYYYMRDFYQ-----------------ATGTNPIALRYIDW--------TLTVPLMCVEFYLITKK---A--GGTS-GL------------LWR-LIWASVAMLLLGYIGE---A------F--YA------------------D---Q---------TQS------WVW-GALSGLAYFYIVWLV-----W--K-GEVATLAAN--A-GGK-V-Q-T-A-V-K-AL-GWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env1-c]_EU915929 [unk-env1-c] clone_xd109_EU915929 gi|229358740|gb|EU915929| Uncultured bacterium clone xd109 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone xd109 putative proteorhodopsin gene, partial cds. EU915929 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGCGTTCTTCTTTATGGAGCGCAGCCGCGTCGCCGACGAGTGGAAGCTCTCGCTGTTGGTTTCTGGTTTGATCACCGGTATCGCAGCCGTGCACTACTACTACATGCGCGACTTTTACCAAGCGACCGGAACGAACCCGATCGCCCTTCGCTACATTGACTGGACCCTGACGGTTCCCTTGATGTGTGTGGAGTTTTACTTAATCACCAAAAAAGCAGGCGGCACCAGCGGTTTGCTTTGGCGCCTGATTTGGGCCTCAGTAGCCATGCTGCTGCTCGGCTACATCGGTGAGGCCTTCTACGCGGACCAAACCCAATCTTGGGTGTGGGGCGCTCTGTCAGGTCTTGCATACTTCTACATTGTATGGCTTGTTTGGAAGGGCGAGGTTGCGACCTTGGCGGCCAATGCAGGCGGAAAAGTTCAGACGGCCGTCAAGGCCTTGGGCTGGTTCGTACTCGTAGGTTGGGCCATCTAC MVAATAFFFMERSRVADEWKLSLLVSGLITGIAAVHYYYMRDFYQATGTNPIALRYIDWTLTVPLMCVEFYLITKKAGGTSGLLWRLIWASVAMLLLGYIGEAFYADQTQSWVWGALSGLAYFYIVWLVWKGEVATLAANAGGKVQTAVKALGWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCGTTCTTCTTTATGGAGCGCAGCCGCGTCGCCGACGAGTGGAAGCTCTCGCTGTTGGTTTCTGGTTTGATCACCGGTATCGCAGCCGTGCACTACTACTACATGCGCGACTTTTACCAA---------------------------------------------------GCGACCGGAACGAACCCGATCGCCCTTCGCTACATTGACTGG------------------------ACCCTGACGGTTCCCTTGATGTGTGTGGAGTTTTACTTAATCACCAAAAAA---------GCA------GGCGGCACCAGC---GGTTTG------------------------------------CTTTGGCGC---CTGATTTGGGCCTCAGTAGCCATGCTGCTGCTCGGCTACATCGGTGAG---------GCC------------------TTC------TACGCG------------------------------------------------------GAC---------CAA---------------------------ACCCAATCT------------------TGGGTGTGG---GGCGCTCTGTCAGGTCTTGCATACTTCTACATTGTATGGCTTGTT---------------TGG------AAG---GGCGAGGTTGCGACCTTGGCGGCCAAT------GCA---GGCGGAAAA---GTT---CAG---ACG---GCC---GTC---AAG---GCCTTG---GGCTGGTTCGTACTCGTA---------------------------------------------------------------GGTTGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMERSRVADEWKLSLLVSGLITGIAAVHYYYMRDFYQ-----------------ATGTNPIALRYIDW--------TLTVPLMCVEFYLITKK---A--GGTS-GL------------LWR-LIWASVAMLLLGYIGE---A------F--YA------------------D---Q---------TQS------WVW-GALSGLAYFYIVWLV-----W--K-GEVATLAAN--A-GGK-V-Q-T-A-V-K-AL-GWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env1-c]_EU915909 [unk-env1-c] clone_MDH1402_EU915909 gi|229358700|gb|EU915909| Uncultured bacterium clone MDH1402 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone MDH1402 putative proteorhodopsin gene, partial cds. EU915909 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGCATTCTTCTTTATGGAGCGCAGCCGCGTCGCCGACGAGTGGAAGCTCTCGCTGTTGGTTTCTGGTTTGATCACCGGTATCGCAGCCGTGCACTACTACTACATGCGCGACTTTTACCAAGCGACCGGAACGAACCCGATCGCCCTTCGCTACATTGACTGGACCCTGACGGTTCCCTTGATGTGTGTGGAGTTTTACTTGATCACCAAAAAAGCAGGCGGCACCAGCGGCTTGCTTTGGCGCCTGATTTGGGCCTCAGTAGCCATGCTGCTGCTCGGCTACATCGGTGAGGCCTTCTACGCGGACCAAACCCAATCTTGGGTGTGGGGCGCTCTGTCAGGTCTTGCATACTTCTACATTGTATGGCTTGTTTGGAAGGGCGAGGTTGCGACCTTGGCGGCCAATGCAGGCGGAAAAGTTCAGACGGCCGTCAAGGCCTTGGGCTGGTTCGTACTCGTAGGCTGGGCAATATAC MVAATAFFFMERSRVADEWKLSLLVSGLITGIAAVHYYYMRDFYQATGTNPIALRYIDWTLTVPLMCVEFYLITKKAGGTSGLLWRLIWASVAMLLLGYIGEAFYADQTQSWVWGALSGLAYFYIVWLVWKGEVATLAANAGGKVQTAVKALGWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCATTCTTCTTTATGGAGCGCAGCCGCGTCGCCGACGAGTGGAAGCTCTCGCTGTTGGTTTCTGGTTTGATCACCGGTATCGCAGCCGTGCACTACTACTACATGCGCGACTTTTACCAA---------------------------------------------------GCGACCGGAACGAACCCGATCGCCCTTCGCTACATTGACTGG------------------------ACCCTGACGGTTCCCTTGATGTGTGTGGAGTTTTACTTGATCACCAAAAAA---------GCA------GGCGGCACCAGC---GGCTTG------------------------------------CTTTGGCGC---CTGATTTGGGCCTCAGTAGCCATGCTGCTGCTCGGCTACATCGGTGAG---------GCC------------------TTC------TACGCG------------------------------------------------------GAC---------CAA---------------------------ACCCAATCT------------------TGGGTGTGG---GGCGCTCTGTCAGGTCTTGCATACTTCTACATTGTATGGCTTGTT---------------TGG------AAG---GGCGAGGTTGCGACCTTGGCGGCCAAT------GCA---GGCGGAAAA---GTT---CAG---ACG---GCC---GTC---AAG---GCCTTG---GGCTGGTTCGTACTCGTA---------------------------------------------------------------GGCTGG---------GCAATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMERSRVADEWKLSLLVSGLITGIAAVHYYYMRDFYQ-----------------ATGTNPIALRYIDW--------TLTVPLMCVEFYLITKK---A--GGTS-GL------------LWR-LIWASVAMLLLGYIGE---A------F--YA------------------D---Q---------TQS------WVW-GALSGLAYFYIVWLV-----W--K-GEVATLAAN--A-GGK-V-Q-T-A-V-K-AL-GWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env1-c]_EF088558 [unk-env1-c] clone_AT37002_EF088558 gi|126843355|gb|EF088558| Uncultured bacterium clone AT37002 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT37002 putative proteorhodopsin gene, partial cds. EF088558 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na surface water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGCTAGCCGCTACTGCCTTCTTCTTTATGGAGCGCAGCCGCGTCGCCGACGAGGAGCTCTCGCTGTTGGTTTCTGGTTTGATCACCGGTATCGCAGCCGTGCACTACTACTACATGCGCGACTTTTACCAAGCGACCGGAACGAACCCGATCGCCCTTCGCTACATTGACTGGACCCTGACGGTTCCCTTGATGTGTGTGGAGTTTTACTTAATCACCAAAAAAGCAGGCGGCACCAGCGGCTTGCTTTGGCGCCTGATTTGGGCCTCAGCAGCCATGCTGCTGCTCGGCTACATCGGTGAGGCCTTCTACGCGGACCAAACCCAATCTTGGGTGTGGGGCGCTCTGTCAGGTCTTGCATACTTCTACATTGTATGGCTTGTTTGGAAGGGCGAGGTTGCGACCTTGGCTGCCAATGCAGGCGGAAAAGTTCAGACGGCCGTCAAGGCCTTGGGCTGGTTCGTACTCGTAGGCTGGGCCATTTATCCA MLAATAFFFMERSRVADEELSLLVSGLITGIAAVHYYYMRDFYQATGTNPIALRYIDWTLTVPLMCVEFYLITKKAGGTSGLLWRLIWASAAMLLLGYIGEAFYADQTQSWVWGALSGLAYFYIVWLVWKGEVATLAANAGGKVQTAVKALGWFVLVGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTAGCCGCTACTGCCTTCTTCTTTATGGAGCGCAGCCGCGTCGCCGACGAG---GAGCTCTCGCTGTTGGTTTCTGGTTTGATCACCGGTATCGCAGCCGTGCACTACTACTACATGCGCGACTTTTACCAA---------------------------------------------------GCGACCGGAACGAACCCGATCGCCCTTCGCTACATTGACTGG------------------------ACCCTGACGGTTCCCTTGATGTGTGTGGAGTTTTACTTAATCACCAAAAAA---------GCA------GGCGGCACCAGC---GGCTTG------------------------------------CTTTGGCGC---CTGATTTGGGCCTCAGCAGCCATGCTGCTGCTCGGCTACATCGGTGAG---------GCC------------------TTC------TACGCG------------------------------------------------------GAC---------CAA---------------------------ACCCAATCT------------------TGGGTGTGG---GGCGCTCTGTCAGGTCTTGCATACTTCTACATTGTATGGCTTGTT---------------TGG------AAG---GGCGAGGTTGCGACCTTGGCTGCCAAT------GCA---GGCGGAAAA---GTT---CAG---ACG---GCC---GTC---AAG---GCCTTG---GGCTGGTTCGTACTCGTA---------------------------------------------------------------GGCTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFMERSRVADE-ELSLLVSGLITGIAAVHYYYMRDFYQ-----------------ATGTNPIALRYIDW--------TLTVPLMCVEFYLITKK---A--GGTS-GL------------LWR-LIWASAAMLLLGYIGE---A------F--YA------------------D---Q---------TQS------WVW-GALSGLAYFYIVWLV-----W--K-GEVATLAAN--A-GGK-V-Q-T-A-V-K-AL-GWFVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env1-c]_EF088570 [unk-env1-c] clone_AT37019_EF088570 gi|126843379|gb|EF088570| Uncultured bacterium clone AT37019 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT37019 putative proteorhodopsin gene, partial cds. EF088570 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na surface water sample Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N., Wei,B. and Zhao,M. Unpublished #na #na ATGGTGGCCGCTACTGCCTTCTTCTTTATGGAGCGCAGCCGCGTCGCCGACGAGTGGGAGCTCTCGCTGTTGGTTTCTGGTTTGATCACCGGTATCGCAGCCGTGCACTACTACTACATGCGCGACTTTTACCAAGCGACCGGAACGAACCCGATCACCCTTCGCTACATTGACTGGACCCTGACGGTTCCCTTGATGTGTGTGGAGTTTTACTTAATCACCAAAAAAGCAGGCGGCACCAGCGGCTTGCTTTGGCGCCTGATTTGGGCCTCAGTAGCCATGCTGCTGCTCGGCTACATCGGTGAGGCCTTCTACGCGGACCAAACCCAATCTTGGGTGTGGGGCGCTCTGTCAGGTCTTGCATACTTCTACATTGTATGGCTTGTTTGGAAGGGCGAGGTTGCGACCTTGGCTGCCAATGCAGGCGGAAAAGTTCAGACGGCCGTCAAGGCCTTGGGCTGGTTCGTACTCGTAGGCTGGGCAATCTACCCA MVAATAFFFMERSRVADEWELSLLVSGLITGIAAVHYYYMRDFYQATGTNPITLRYIDWTLTVPLMCVEFYLITKKAGGTSGLLWRLIWASVAMLLLGYIGEAFYADQTQSWVWGALSGLAYFYIVWLVWKGEVATLAANAGGKVQTAVKALGWFVLVGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCCTTCTTCTTTATGGAGCGCAGCCGCGTCGCCGACGAGTGGGAGCTCTCGCTGTTGGTTTCTGGTTTGATCACCGGTATCGCAGCCGTGCACTACTACTACATGCGCGACTTTTACCAA---------------------------------------------------GCGACCGGAACGAACCCGATCACCCTTCGCTACATTGACTGG------------------------ACCCTGACGGTTCCCTTGATGTGTGTGGAGTTTTACTTAATCACCAAAAAA---------GCA------GGCGGCACCAGC---GGCTTG------------------------------------CTTTGGCGC---CTGATTTGGGCCTCAGTAGCCATGCTGCTGCTCGGCTACATCGGTGAG---------GCC------------------TTC------TACGCG------------------------------------------------------GAC---------CAA---------------------------ACCCAATCT------------------TGGGTGTGG---GGCGCTCTGTCAGGTCTTGCATACTTCTACATTGTATGGCTTGTT---------------TGG------AAG---GGCGAGGTTGCGACCTTGGCTGCCAAT------GCA---GGCGGAAAA---GTT---CAG---ACG---GCC---GTC---AAG---GCCTTG---GGCTGGTTCGTACTCGTA---------------------------------------------------------------GGCTGG---------GCAATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFMERSRVADEWELSLLVSGLITGIAAVHYYYMRDFYQ-----------------ATGTNPITLRYIDW--------TLTVPLMCVEFYLITKK---A--GGTS-GL------------LWR-LIWASVAMLLLGYIGE---A------F--YA------------------D---Q---------TQS------WVW-GALSGLAYFYIVWLV-----W--K-GEVATLAAN--A-GGK-V-Q-T-A-V-K-AL-GWFVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env1-c]_EU915933 [unk-env1-c] clone_xd122_EU915933 gi|229358748|gb|EU915933| Uncultured bacterium clone xd122 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone xd122 putative proteorhodopsin gene, partial cds. EU915933 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGTATTCTTCTTTATGGAGCGCAGCCGCGTCGCCGACGAGTGGAAGCTCTCGCTGTTGGTTTCTGGTTTGATCACCGGTATCGCAGCCGTGCACTACTACTACATGCGCGACTTTTACCAAGCGACCGGAACGAACCCGATCGCCCTTCGCTACATTGACTGGACCCTTACGGTTCCCTTGATGTGTGTGGAGTTTTACTTAATCACCAAAAAAGCAGGAGGCACCAGCGGCTTGCTTTGGCGCCTGATTTGGGCCTCAGTAGCCATGCTGCTGCTCGGCTACATCGGTGAGGCCTTCTACGCGGACCAAACCCAATCTTGGGTGTGGGGCGCTCTGTCAGGTCTTGCATACTTCTACATTGTATGGCTTGTTTGGAAGGGCGAGGTTGCGACCTTGGCGGCCAATGCAGGCGGAAAAGTTCAGACGGCCGTCAAGGCCTTGGGCTGGTTCGTACTCGTAGGATGGGCGATTTAC MVAATVFFFMERSRVADEWKLSLLVSGLITGIAAVHYYYMRDFYQATGTNPIALRYIDWTLTVPLMCVEFYLITKKAGGTSGLLWRLIWASVAMLLLGYIGEAFYADQTQSWVWGALSGLAYFYIVWLVWKGEVATLAANAGGKVQTAVKALGWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTATTCTTCTTTATGGAGCGCAGCCGCGTCGCCGACGAGTGGAAGCTCTCGCTGTTGGTTTCTGGTTTGATCACCGGTATCGCAGCCGTGCACTACTACTACATGCGCGACTTTTACCAA---------------------------------------------------GCGACCGGAACGAACCCGATCGCCCTTCGCTACATTGACTGG------------------------ACCCTTACGGTTCCCTTGATGTGTGTGGAGTTTTACTTAATCACCAAAAAA---------GCA------GGAGGCACCAGC---GGCTTG------------------------------------CTTTGGCGC---CTGATTTGGGCCTCAGTAGCCATGCTGCTGCTCGGCTACATCGGTGAG---------GCC------------------TTC------TACGCG------------------------------------------------------GAC---------CAA---------------------------ACCCAATCT------------------TGGGTGTGG---GGCGCTCTGTCAGGTCTTGCATACTTCTACATTGTATGGCTTGTT---------------TGG------AAG---GGCGAGGTTGCGACCTTGGCGGCCAAT------GCA---GGCGGAAAA---GTT---CAG---ACG---GCC---GTC---AAG---GCCTTG---GGCTGGTTCGTACTCGTA---------------------------------------------------------------GGATGG---------GCGATTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERSRVADEWKLSLLVSGLITGIAAVHYYYMRDFYQ-----------------ATGTNPIALRYIDW--------TLTVPLMCVEFYLITKK---A--GGTS-GL------------LWR-LIWASVAMLLLGYIGE---A------F--YA------------------D---Q---------TQS------WVW-GALSGLAYFYIVWLV-----W--K-GEVATLAAN--A-GGK-V-Q-T-A-V-K-AL-GWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env1-c]_EU915911 [unk-env1-c] clone_MDH1405_EU915911 gi|229358704|gb|EU915911| Uncultured bacterium clone MDH1405 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone MDH1405 putative proteorhodopsin gene, partial cds. EU915911 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGTGTTCTTCTTTATGGAGCGCAGCCGCGTCGCCGACGAGTGGAAGCTCTCGCTGTTGGTTTCTGGTTTGATCACCGGTATCGCAGCCGTGCACTACTACTACATGCGCGACTTTTACCAAGCGACCGGAACGAACCCGATCGCCCTTCGCTACATTGACTGGACCCTGACGGTTCCCTTGATGTGTGTGGAGTTTTACTTAATCACCAAAAAAGCAGGCGGCACCAGCGGCTTGCTTTGGCGCCTGATTTGGGCCTCAGTAGCCATGCTGCTGCTCGGCTACATCGGTGAGGCCTTCTACGCGGACCAAACCCAATCTTGGGTGTGGGGCGCTCTGTCAGGTCTTGCATACTTCTACATTGTATGGCTTGTTTGGAAGGGCGAGGTTGCGACCTTGGCTGCCAATGCAGGCGGAAAAGTTCAGACGGCCGTCAAGGCCTTGGGCTGGTTCGTACTCGTAGGCTGGGCCATCTAC MVAATVFFFMERSRVADEWKLSLLVSGLITGIAAVHYYYMRDFYQATGTNPIALRYIDWTLTVPLMCVEFYLITKKAGGTSGLLWRLIWASVAMLLLGYIGEAFYADQTQSWVWGALSGLAYFYIVWLVWKGEVATLAANAGGKVQTAVKALGWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTGTTCTTCTTTATGGAGCGCAGCCGCGTCGCCGACGAGTGGAAGCTCTCGCTGTTGGTTTCTGGTTTGATCACCGGTATCGCAGCCGTGCACTACTACTACATGCGCGACTTTTACCAA---------------------------------------------------GCGACCGGAACGAACCCGATCGCCCTTCGCTACATTGACTGG------------------------ACCCTGACGGTTCCCTTGATGTGTGTGGAGTTTTACTTAATCACCAAAAAA---------GCA------GGCGGCACCAGC---GGCTTG------------------------------------CTTTGGCGC---CTGATTTGGGCCTCAGTAGCCATGCTGCTGCTCGGCTACATCGGTGAG---------GCC------------------TTC------TACGCG------------------------------------------------------GAC---------CAA---------------------------ACCCAATCT------------------TGGGTGTGG---GGCGCTCTGTCAGGTCTTGCATACTTCTACATTGTATGGCTTGTT---------------TGG------AAG---GGCGAGGTTGCGACCTTGGCTGCCAAT------GCA---GGCGGAAAA---GTT---CAG---ACG---GCC---GTC---AAG---GCCTTG---GGCTGGTTCGTACTCGTA---------------------------------------------------------------GGCTGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERSRVADEWKLSLLVSGLITGIAAVHYYYMRDFYQ-----------------ATGTNPIALRYIDW--------TLTVPLMCVEFYLITKK---A--GGTS-GL------------LWR-LIWASVAMLLLGYIGE---A------F--YA------------------D---Q---------TQS------WVW-GALSGLAYFYIVWLV-----W--K-GEVATLAAN--A-GGK-V-Q-T-A-V-K-AL-GWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env1-c]_EU915954 [unk-env1-c] clone_14MDH-5_EU915954 gi|229358790|gb|EU915954| Uncultured bacterium clone 14MDH-5 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 14MDH-5 putative proteorhodopsin gene, partial cds. EU915954 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGTGTTCTTCTTTATGGAGCGCAGCCGCGTCGCCGACGAGTGGAAGCTCTCGCTGTTGGTTTCTGGTTTGATCACCGGTATCGCAGCCGTGCACTACTACTACATGCGCGACTTTTACCAAGCGACCGGAACGAACCCGATCGCCCTTCGCTACATTGACTGGACCCTGACGGTTCCCTTGATGTGTGTGGAGTTTTACTTAATCACCAAAAAAGCAGGCGGCACCAGCGGCTTGCTTTGGCGCCTGATTTGGGCCTCAGTAGCCATGCTGCTGCTCGGCTACATCGGTGAGGCCTTCTACGCGGACCAAACCCAATCTTGGGTGTGGGGCGCTCTGTCAGGTCTTGCATACTTCTACATTGTATGGCTTGTTTGGAAGGGCGAGGTTGCGACCTTGGCTGCCAATGCAGGCGGAAAAGTTCAGACGGCCGTCAAGGCCTTGGGCTGGTTCGTACTCGTAGGCTGGGCCATCTAC MVAATVFFFMERSRVADEWKLSLLVSGLITGIAAVHYYYMRDFYQATGTNPIALRYIDWTLTVPLMCVEFYLITKKAGGTSGLLWRLIWASVAMLLLGYIGEAFYADQTQSWVWGALSGLAYFYIVWLVWKGEVATLAANAGGKVQTAVKALGWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTGTTCTTCTTTATGGAGCGCAGCCGCGTCGCCGACGAGTGGAAGCTCTCGCTGTTGGTTTCTGGTTTGATCACCGGTATCGCAGCCGTGCACTACTACTACATGCGCGACTTTTACCAA---------------------------------------------------GCGACCGGAACGAACCCGATCGCCCTTCGCTACATTGACTGG------------------------ACCCTGACGGTTCCCTTGATGTGTGTGGAGTTTTACTTAATCACCAAAAAA---------GCA------GGCGGCACCAGC---GGCTTG------------------------------------CTTTGGCGC---CTGATTTGGGCCTCAGTAGCCATGCTGCTGCTCGGCTACATCGGTGAG---------GCC------------------TTC------TACGCG------------------------------------------------------GAC---------CAA---------------------------ACCCAATCT------------------TGGGTGTGG---GGCGCTCTGTCAGGTCTTGCATACTTCTACATTGTATGGCTTGTT---------------TGG------AAG---GGCGAGGTTGCGACCTTGGCTGCCAAT------GCA---GGCGGAAAA---GTT---CAG---ACG---GCC---GTC---AAG---GCCTTG---GGCTGGTTCGTACTCGTA---------------------------------------------------------------GGCTGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERSRVADEWKLSLLVSGLITGIAAVHYYYMRDFYQ-----------------ATGTNPIALRYIDW--------TLTVPLMCVEFYLITKK---A--GGTS-GL------------LWR-LIWASVAMLLLGYIGE---A------F--YA------------------D---Q---------TQS------WVW-GALSGLAYFYIVWLV-----W--K-GEVATLAAN--A-GGK-V-Q-T-A-V-K-AL-GWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env1-c]_EU915913 [unk-env1-c] clone_MDH1408_EU915913 gi|229358708|gb|EU915913| Uncultured bacterium clone MDH1408 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone MDH1408 putative proteorhodopsin gene, partial cds. EU915913 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGTGTTCTTCTTTATGGAGCGCAGCCGCGTCGCCGACGAGTGGAAGCTCTCGCTGTTGGTTTCTGGTTTGATCACCGGTATCGCAGCCGTGCACTACTACTACATGCGCGACTTTTACCAAGCGACCGGAACGAACCCGATCGCCCTTCGCTACATTGACTGGACCCTGACGGTTCCCTTGATGTGTGTGGAGTTTTACTTAATCACCAAAAAAGCAGGCGGCACCAGCGGCTTGCTTTGGCGCCTGATTTGGGCCTCAGTAGCCATGCTGCTGCTCGGCTACATCGGTGAGGCCTTCTACGCGGACCAAACCCAATCTTGGGTGTGGGGCGCTCTGTCAGGTCTTGCATACTTCTACATTGTATGGCTTGTTTGGAAGGGCGAGGTTGCGACCTTGGCTGCCAATGCAGGCGGAAAAGTTCAGACGGCCGTCAAGGCCTTGGGCTGGTTCGTACTCGTAGGCTGGGCCATCTAC MVAATVFFFMERSRVADEWKLSLLVSGLITGIAAVHYYYMRDFYQATGTNPIALRYIDWTLTVPLMCVEFYLITKKAGGTSGLLWRLIWASVAMLLLGYIGEAFYADQTQSWVWGALSGLAYFYIVWLVWKGEVATLAANAGGKVQTAVKALGWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTGTTCTTCTTTATGGAGCGCAGCCGCGTCGCCGACGAGTGGAAGCTCTCGCTGTTGGTTTCTGGTTTGATCACCGGTATCGCAGCCGTGCACTACTACTACATGCGCGACTTTTACCAA---------------------------------------------------GCGACCGGAACGAACCCGATCGCCCTTCGCTACATTGACTGG------------------------ACCCTGACGGTTCCCTTGATGTGTGTGGAGTTTTACTTAATCACCAAAAAA---------GCA------GGCGGCACCAGC---GGCTTG------------------------------------CTTTGGCGC---CTGATTTGGGCCTCAGTAGCCATGCTGCTGCTCGGCTACATCGGTGAG---------GCC------------------TTC------TACGCG------------------------------------------------------GAC---------CAA---------------------------ACCCAATCT------------------TGGGTGTGG---GGCGCTCTGTCAGGTCTTGCATACTTCTACATTGTATGGCTTGTT---------------TGG------AAG---GGCGAGGTTGCGACCTTGGCTGCCAAT------GCA---GGCGGAAAA---GTT---CAG---ACG---GCC---GTC---AAG---GCCTTG---GGCTGGTTCGTACTCGTA---------------------------------------------------------------GGCTGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERSRVADEWKLSLLVSGLITGIAAVHYYYMRDFYQ-----------------ATGTNPIALRYIDW--------TLTVPLMCVEFYLITKK---A--GGTS-GL------------LWR-LIWASVAMLLLGYIGE---A------F--YA------------------D---Q---------TQS------WVW-GALSGLAYFYIVWLV-----W--K-GEVATLAAN--A-GGK-V-Q-T-A-V-K-AL-GWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env1-c]_EU915956 [unk-env1-c] clone_14MDH-8_EU915956 gi|229358794|gb|EU915956| Uncultured bacterium clone 14MDH-8 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 14MDH-8 putative proteorhodopsin gene, partial cds. EU915956 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGTGTTCTTCTTTATGGAGCGCAGCCGCGTCGCCGACGAGTGGAAGCTCTCGCTGTTGGTTTCTGGTTTGATCACCGGTATCGCAGCCGTGCACTACTACTACATGCGCGACTTTTACCAAGCGACCGGAACGAACCCGATCGCCCTTCGCTACATTGACTGGACCCTGACGGTTCCCTTGATGTGTGTGGAGTTTTACTTAATCACCAAAAAAGCAGGCGGCACCAGCGGCTTGCTTTGGCGCCTGATTTGGGCCTCAGTAGCCATGCTGCTGCTCGGCTACATCGGTGAGGCCTTCTACGCGGACCAAACCCAATCTTGGGTGTGGGGCGCTCTGTCAGGTCTTGCATACTTCTACATTGTATGGCTTGTTTGGAAGGGCGAGGTTGCGACCTTGGCTGCCAATGCAGGCGGAAAAGTTCAGACGGCCGTCAAGGCCTTGGGCTGGTTCGTACTCGTAGGCTGGGCCATCTAC MVAATVFFFMERSRVADEWKLSLLVSGLITGIAAVHYYYMRDFYQATGTNPIALRYIDWTLTVPLMCVEFYLITKKAGGTSGLLWRLIWASVAMLLLGYIGEAFYADQTQSWVWGALSGLAYFYIVWLVWKGEVATLAANAGGKVQTAVKALGWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTGTTCTTCTTTATGGAGCGCAGCCGCGTCGCCGACGAGTGGAAGCTCTCGCTGTTGGTTTCTGGTTTGATCACCGGTATCGCAGCCGTGCACTACTACTACATGCGCGACTTTTACCAA---------------------------------------------------GCGACCGGAACGAACCCGATCGCCCTTCGCTACATTGACTGG------------------------ACCCTGACGGTTCCCTTGATGTGTGTGGAGTTTTACTTAATCACCAAAAAA---------GCA------GGCGGCACCAGC---GGCTTG------------------------------------CTTTGGCGC---CTGATTTGGGCCTCAGTAGCCATGCTGCTGCTCGGCTACATCGGTGAG---------GCC------------------TTC------TACGCG------------------------------------------------------GAC---------CAA---------------------------ACCCAATCT------------------TGGGTGTGG---GGCGCTCTGTCAGGTCTTGCATACTTCTACATTGTATGGCTTGTT---------------TGG------AAG---GGCGAGGTTGCGACCTTGGCTGCCAAT------GCA---GGCGGAAAA---GTT---CAG---ACG---GCC---GTC---AAG---GCCTTG---GGCTGGTTCGTACTCGTA---------------------------------------------------------------GGCTGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERSRVADEWKLSLLVSGLITGIAAVHYYYMRDFYQ-----------------ATGTNPIALRYIDW--------TLTVPLMCVEFYLITKK---A--GGTS-GL------------LWR-LIWASVAMLLLGYIGE---A------F--YA------------------D---Q---------TQS------WVW-GALSGLAYFYIVWLV-----W--K-GEVATLAAN--A-GGK-V-Q-T-A-V-K-AL-GWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env1-b]_EU915825 [unk-env1-b] PF12056_env_samples_EU915825 gi|229358532|gb|EU915825| Uncultured microorganism clone PF12056 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF12056 putative proteorhodopsin gene, partial cds EU915825 [[root proteorhodopsin/env cluster 1/B subcluster]] root proteorhodopsin env cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na CTATTAGCGGCTACTGTATTCTTCTTTATGGAGCGCAGCCGCGTCGCCGACGAGTGGAAGCTCTCGCTGTTGGTTTCTGGTTTGATCACCGGTATCGCAGCCGTGCACTACTACTACATGCGCGACTTTTACCAAGCGACCGGAACGAACCCGATCGCCCTTCGCTACATTGACTGGACCCTGACGGTTCCCTTGATGTGTGTGGAGTTTTACTTAATCACCAAAAAAGCAGGCGGCACCAGCGGCTTGCTTTGGCGCCTGATTTGGGCCTCAGTAGCCATGCTGCTGCTCGGCTACATCGGTGAGGCCTTCTACGCAGACCAAACCCAGTCTTGGGTGTGGGGCGCTCTGTCAGGTCTTGCATACTTCTACATTGTATGGCTTGTTTGGAAGGGCGAGGTTGCGACCTTGGCTGCCAATGCAGGCGGAAAAGTTCAGACGGCCGTCAAGGCCTTGGGCTGGTTCGTACTCGTAGGATGGGCCATCTAT LLAATVFFFMERSRVADEWKLSLLVSGLITGIAAVHYYYMRDFYQATGTNPIALRYIDWTLTVPLMCVEFYLITKKAGGTSGLLWRLIWASVAMLLLGYIGEAFYADQTQSWVWGALSGLAYFYIVWLVWKGEVATLAANAGGKVQTAVKALGWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAGCGGCTACTGTATTCTTCTTTATGGAGCGCAGCCGCGTCGCCGACGAGTGGAAGCTCTCGCTGTTGGTTTCTGGTTTGATCACCGGTATCGCAGCCGTGCACTACTACTACATGCGCGACTTTTACCAA---------------------------------------------------GCGACCGGAACGAACCCGATCGCCCTTCGCTACATTGACTGG------------------------ACCCTGACGGTTCCCTTGATGTGTGTGGAGTTTTACTTAATCACCAAAAAA---------GCA------GGCGGCACCAGC---GGCTTG------------------------------------CTTTGGCGC---CTGATTTGGGCCTCAGTAGCCATGCTGCTGCTCGGCTACATCGGTGAG---------GCC------------------TTC------TACGCA------------------------------------------------------GAC---------CAA---------------------------ACCCAGTCT------------------TGGGTGTGG---GGCGCTCTGTCAGGTCTTGCATACTTCTACATTGTATGGCTTGTT---------------TGG------AAG---GGCGAGGTTGCGACCTTGGCTGCCAAT------GCA---GGCGGAAAA---GTT---CAG---ACG---GCC---GTC---AAG---GCCTTG---GGCTGGTTCGTACTCGTA---------------------------------------------------------------GGATGG---------GCCATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------LLAATVFFFMERSRVADEWKLSLLVSGLITGIAAVHYYYMRDFYQ-----------------ATGTNPIALRYIDW--------TLTVPLMCVEFYLITKK---A--GGTS-GL------------LWR-LIWASVAMLLLGYIGE---A------F--YA------------------D---Q---------TQS------WVW-GALSGLAYFYIVWLV-----W--K-GEVATLAAN--A-GGK-V-Q-T-A-V-K-AL-GWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env1-b]_EU915760 [unk-env1-b] PF75113_env_samples_EU915760 gi|229358402|gb|EU915760| Uncultured microorganism clone PF75113 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF75113 putative proteorhodopsin gene, partial cds EU915760 [[root proteorhodopsin/env cluster 1/B subcluster]] root proteorhodopsin env cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTAGCCGCTACTGTGTTCTTCTTTATGGAGCGCAGCCGCGTCGCCGACGAGTGGAAGCTCTCGCTGTTGGTTTCTGGTTTGATCACCGGTATCGCAGCCGTGCACTACTACTACATGCGCGACTTTTACCAAGCGACCGGAACGAACCCGATCGCCCTTCGCTACATTGACTGGACCCTGACGGTTCCCTTGATGTGTGTGGAGTTTTACTTAATCACCAAAAAAGCAGGCGGCACCAGCGGCTTGCTTTGGCGCCTGATTTGGGCCTCAGTAGCCATGCTGCTGCTCGGCTACATCGGTGAGGCCTTCTACGCGGACCAAACCCAATCTTGGGTGTGGGGCGCTCTGTCAGGTCTTGCATACTTCTACATTGTATGGCTTGTTTGGAAGGGCGAGGTTGCGACCTTGGCTGCCAATGCAGGCGGAAAAGTCCAGACGGCCGTCAAGGCCTTGGGCTGGTTCGTACTCGTAGGATGGGCCATCTAC MVAATVFFFMERSRVADEWKLSLLVSGLITGIAAVHYYYMRDFYQATGTNPIALRYIDWTLTVPLMCVEFYLITKKAGGTSGLLWRLIWASVAMLLLGYIGEAFYADQTQSWVWGALSGLAYFYIVWLVWKGEVATLAANAGGKVQTAVKALGWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTGTTCTTCTTTATGGAGCGCAGCCGCGTCGCCGACGAGTGGAAGCTCTCGCTGTTGGTTTCTGGTTTGATCACCGGTATCGCAGCCGTGCACTACTACTACATGCGCGACTTTTACCAA---------------------------------------------------GCGACCGGAACGAACCCGATCGCCCTTCGCTACATTGACTGG------------------------ACCCTGACGGTTCCCTTGATGTGTGTGGAGTTTTACTTAATCACCAAAAAA---------GCA------GGCGGCACCAGC---GGCTTG------------------------------------CTTTGGCGC---CTGATTTGGGCCTCAGTAGCCATGCTGCTGCTCGGCTACATCGGTGAG---------GCC------------------TTC------TACGCG------------------------------------------------------GAC---------CAA---------------------------ACCCAATCT------------------TGGGTGTGG---GGCGCTCTGTCAGGTCTTGCATACTTCTACATTGTATGGCTTGTT---------------TGG------AAG---GGCGAGGTTGCGACCTTGGCTGCCAAT------GCA---GGCGGAAAA---GTC---CAG---ACG---GCC---GTC---AAG---GCCTTG---GGCTGGTTCGTACTCGTA---------------------------------------------------------------GGATGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERSRVADEWKLSLLVSGLITGIAAVHYYYMRDFYQ-----------------ATGTNPIALRYIDW--------TLTVPLMCVEFYLITKK---A--GGTS-GL------------LWR-LIWASVAMLLLGYIGE---A------F--YA------------------D---Q---------TQS------WVW-GALSGLAYFYIVWLV-----W--K-GEVATLAAN--A-GGK-V-Q-T-A-V-K-AL-GWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env1-b]_EU915748 [unk-env1-b] PF75076_env_samples_EU915748 gi|229358378|gb|EU915748| Uncultured microorganism clone PF75076 putative proteorhodopsin gene, partial cds Uncultured microorganism clone PF75076 putative proteorhodopsin gene, partial cds EU915748 [[root proteorhodopsin/env cluster 1/B subcluster]] root proteorhodopsin env cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 31-DEC-2009 #na ocean_sample Pacific Ocean marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20JUL2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTCGCCGCTACTGTGTTCTTCTTTATGGAGCGCAGCCGCGTCGCCGACGAGTGGAAGCTCTCGCTGTTGGTTTCTGGTTTGATCACCGGTATCGCAGCCGTGCACTACTACTACATGCGCGACTTTTACCAAGCGACCGGAACGAACCCGATCGCCCTTCGCTACATTGACTGGACCCTGACGGTTCCCTTGATGTGTGTGGAGTTTTACTTAATCACCAAAAAAGCAGGCGGCACCAGCGGCTTGCTTTGGCGCCTGATTTGGGCCTCAGTAGCCATGCTGCTGCTCGGCTACATCGGTGAGGCCTTCTACGCGGACCAAACCCAATCTTGGGTGTGGGGCGCTCCGTCAGGTCTTGCATACTTCTACATTGTATGGCTTGTTTGGAAGGGCGAGGTTGCGACCTTGGCTGCCAATGCAGGCGGAAAAGTTCAGACGGCCGTCAAGGCCTTGGGCTGGTTCGTACTCGTAGGATGGGCAATCTAC MVAATVFFFMERSRVADEWKLSLLVSGLITGIAAVHYYYMRDFYQATGTNPIALRYIDWTLTVPLMCVEFYLITKKAGGTSGLLWRLIWASVAMLLLGYIGEAFYADQTQSWVWGAPSGLAYFYIVWLVWKGEVATLAANAGGKVQTAVKALGWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCCGCTACTGTGTTCTTCTTTATGGAGCGCAGCCGCGTCGCCGACGAGTGGAAGCTCTCGCTGTTGGTTTCTGGTTTGATCACCGGTATCGCAGCCGTGCACTACTACTACATGCGCGACTTTTACCAA---------------------------------------------------GCGACCGGAACGAACCCGATCGCCCTTCGCTACATTGACTGG------------------------ACCCTGACGGTTCCCTTGATGTGTGTGGAGTTTTACTTAATCACCAAAAAA---------GCA------GGCGGCACCAGC---GGCTTG------------------------------------CTTTGGCGC---CTGATTTGGGCCTCAGTAGCCATGCTGCTGCTCGGCTACATCGGTGAG---------GCC------------------TTC------TACGCG------------------------------------------------------GAC---------CAA---------------------------ACCCAATCT------------------TGGGTGTGG---GGCGCTCCGTCAGGTCTTGCATACTTCTACATTGTATGGCTTGTT---------------TGG------AAG---GGCGAGGTTGCGACCTTGGCTGCCAAT------GCA---GGCGGAAAA---GTT---CAG---ACG---GCC---GTC---AAG---GCCTTG---GGCTGGTTCGTACTCGTA---------------------------------------------------------------GGATGG---------GCAATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERSRVADEWKLSLLVSGLITGIAAVHYYYMRDFYQ-----------------ATGTNPIALRYIDW--------TLTVPLMCVEFYLITKK---A--GGTS-GL------------LWR-LIWASVAMLLLGYIGE---A------F--YA------------------D---Q---------TQS------WVW-GAPSGLAYFYIVWLV-----W--K-GEVATLAAN--A-GGK-V-Q-T-A-V-K-AL-GWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env1-b]_EU915957 [unk-env1-b] clone_14MDH-10_EU915957 gi|229358796|gb|EU915957| Uncultured bacterium clone 14MDH-10 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 14MDH-10 putative proteorhodopsin gene, partial cds. EU915957 [[root proteorhodopsin/env cluster 1/B subcluster]] root proteorhodopsin env cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTAGCCGCTACTGTGTTCTTCTTTATGGAGCGCAGCCGCGTCGCCGACGAGTGGAAGCTCTCGCTGTTGGTTTCTGGTTTGATCACCGGTATCGCAGCCGTGCACTACTACTACATGCGCGACTTTTACCAAGCGACCGGAACGAACCCGATCGCCCTTCGCTACATTGACTGGACCCTGACGGTTCCATTGATGTGTGTGGAGTTTTACTTAATCACCAAAAAAGCAGGCGGCACCAGCGGCTTGCTTTGGCGCCTGATTTGGGCCTCAGTAGCCATGCTGCTGCTCGGCTACATCGGTGAGGCCTTCTACGCGGACCAAACCCAATCTTGGGTGTGGGGCGCTCTGTCAGGTCTTGCATACTTCTACATTGTATGGCTTGTTTGGAAGGGCGAGGTTGCGACCTTGGCTGCCAATGCAGGCGGAAAAGTTCAGGCGGCCGTCAAGGCCTTGGGCTGGTTCGTACTCGTAGGCTGGGCCATCTAC MVAATVFFFMERSRVADEWKLSLLVSGLITGIAAVHYYYMRDFYQATGTNPIALRYIDWTLTVPLMCVEFYLITKKAGGTSGLLWRLIWASVAMLLLGYIGEAFYADQTQSWVWGALSGLAYFYIVWLVWKGEVATLAANAGGKVQAAVKALGWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTGTTCTTCTTTATGGAGCGCAGCCGCGTCGCCGACGAGTGGAAGCTCTCGCTGTTGGTTTCTGGTTTGATCACCGGTATCGCAGCCGTGCACTACTACTACATGCGCGACTTTTACCAA---------------------------------------------------GCGACCGGAACGAACCCGATCGCCCTTCGCTACATTGACTGG------------------------ACCCTGACGGTTCCATTGATGTGTGTGGAGTTTTACTTAATCACCAAAAAA---------GCA------GGCGGCACCAGC---GGCTTG------------------------------------CTTTGGCGC---CTGATTTGGGCCTCAGTAGCCATGCTGCTGCTCGGCTACATCGGTGAG---------GCC------------------TTC------TACGCG------------------------------------------------------GAC---------CAA---------------------------ACCCAATCT------------------TGGGTGTGG---GGCGCTCTGTCAGGTCTTGCATACTTCTACATTGTATGGCTTGTT---------------TGG------AAG---GGCGAGGTTGCGACCTTGGCTGCCAAT------GCA---GGCGGAAAA---GTT---CAG---GCG---GCC---GTC---AAG---GCCTTG---GGCTGGTTCGTACTCGTA---------------------------------------------------------------GGCTGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERSRVADEWKLSLLVSGLITGIAAVHYYYMRDFYQ-----------------ATGTNPIALRYIDW--------TLTVPLMCVEFYLITKK---A--GGTS-GL------------LWR-LIWASVAMLLLGYIGE---A------F--YA------------------D---Q---------TQS------WVW-GALSGLAYFYIVWLV-----W--K-GEVATLAAN--A-GGK-V-Q-A-A-V-K-AL-GWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env1-b]_EU915910 [unk-env1-b] clone_MDH1410_EU915910 gi|229358702|gb|EU915910| Uncultured bacterium clone MDH1410 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone MDH1410 putative proteorhodopsin gene, partial cds. EU915910 [[root proteorhodopsin/env cluster 1/B subcluster]] root proteorhodopsin env cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTAGCCGCTACTGTGTTCTTCTTTATGGAGCGCAGCCGCGTCGCCGACGAGTGGAAGCTCTCGCTGTTGGTTTCTGGTTTGATCACCGGTATCGCAGCCGTGCACTACTACTACATGCGCGACTTTTACCAAGCGACCGGAACGAACCCGATCGCCCTTCGCTACATTGACTGGACCCTGACGGTTCCATTGATGTGTGTGGAGTTTTACTTAATCACCAAAAAAGCAGGCGGCACCAGCGGCTTGCTTTGGCGCCTGATTTGGGCCTCAGTAGCCATGCTGCTGCTCGGCTACATCGGTGAGGCCTTCTACGCGGACCAAACCCAATCTTGGGTGTGGGGCGCTCTGTCAGGTCTTGCATACTTCTACATTGTATGGCTTGTTTGGAAGGGCGAGGTTGCGACCTTGGCTGCCAATGCAGGCGGAAAAGTTCAGGCGGCCGTCAAGGCCTTGGGCTGGTTCGTACTCGTAGGCTGGGCCATCTAC MVAATVFFFMERSRVADEWKLSLLVSGLITGIAAVHYYYMRDFYQATGTNPIALRYIDWTLTVPLMCVEFYLITKKAGGTSGLLWRLIWASVAMLLLGYIGEAFYADQTQSWVWGALSGLAYFYIVWLVWKGEVATLAANAGGKVQAAVKALGWFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTGTTCTTCTTTATGGAGCGCAGCCGCGTCGCCGACGAGTGGAAGCTCTCGCTGTTGGTTTCTGGTTTGATCACCGGTATCGCAGCCGTGCACTACTACTACATGCGCGACTTTTACCAA---------------------------------------------------GCGACCGGAACGAACCCGATCGCCCTTCGCTACATTGACTGG------------------------ACCCTGACGGTTCCATTGATGTGTGTGGAGTTTTACTTAATCACCAAAAAA---------GCA------GGCGGCACCAGC---GGCTTG------------------------------------CTTTGGCGC---CTGATTTGGGCCTCAGTAGCCATGCTGCTGCTCGGCTACATCGGTGAG---------GCC------------------TTC------TACGCG------------------------------------------------------GAC---------CAA---------------------------ACCCAATCT------------------TGGGTGTGG---GGCGCTCTGTCAGGTCTTGCATACTTCTACATTGTATGGCTTGTT---------------TGG------AAG---GGCGAGGTTGCGACCTTGGCTGCCAAT------GCA---GGCGGAAAA---GTT---CAG---GCG---GCC---GTC---AAG---GCCTTG---GGCTGGTTCGTACTCGTA---------------------------------------------------------------GGCTGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFMERSRVADEWKLSLLVSGLITGIAAVHYYYMRDFYQ-----------------ATGTNPIALRYIDW--------TLTVPLMCVEFYLITKK---A--GGTS-GL------------LWR-LIWASVAMLLLGYIGE---A------F--YA------------------D---Q---------TQS------WVW-GALSGLAYFYIVWLV-----W--K-GEVATLAAN--A-GGK-V-Q-A-A-V-K-AL-GWFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env1-b]_JX863184 [unk-env1-b] MALINA_OTU22_276_M_env_samples_JX863184 gi|425477318|gb|JX863184| Uncultured bacterium clone MALINA OTU22 276 M putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU22 276 M putative proteorhodopsin gene, partial cds JX863184 [[root proteorhodopsin/env cluster 1/B subcluster]] root proteorhodopsin env cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 13Aug2009 0m_depth Arctic Ocean marine 69.25 -137.2 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGACCCTAACGGTTCCTTTGATGTGCGTTGAATTCTATTTGATCACCAAAAAGGCCGGTGGAACCAGCGGCTTGCTTTGGCGTTTGATCATCGCTTCAGTTGCTATGCTTCTGTTGGGATACATCGGAGAGGCCTTCCACGCAGACGAAGCTGAGTCTTGGATCTGGGGTGCGCTTTCAGGTTTGGCTTACTTCTACATCGTTTGGATGGTATGGAAGGGCGAGGTTGCTACCTTGGCTGCTAACGCTGGCGGAAAAGTTCAGAGCGCCGTTAAGGCACTCGGCTGGTTCGTACTAGTA WTLTVPLMCVEFYLITKKAGGTSGLLWRLIIASVAMLLLGYIGEAFHADEAESWIWGALSGLAYFYIVWMVWKGEVATLAANAGGKVQSAVKALGWFVLV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------ACCCTAACGGTTCCTTTGATGTGCGTTGAATTCTATTTGATCACCAAAAAG---------GCC------GGTGGAACCAGC---GGCTTG------------------------------------CTTTGGCGT---TTGATCATCGCTTCAGTTGCTATGCTTCTGTTGGGATACATCGGAGAG---------GCC------------------TTC------CACGCA------------------------------------------------------GAC---------GAA---------------------------GCTGAGTCT------------------TGGATCTGG---GGTGCGCTTTCAGGTTTGGCTTACTTCTACATCGTTTGGATGGTA---------------TGG------AAG---GGCGAGGTTGCTACCTTGGCTGCTAAC------GCT---GGCGGAAAA---GTT---CAG---AGC---GCC---GTT---AAG---GCACTC---GGCTGGTTCGTACTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------TLTVPLMCVEFYLITKK---A--GGTS-GL------------LWR-LIIASVAMLLLGYIGE---A------F--HA------------------D---E---------AES------WIW-GALSGLAYFYIVWMV-----W--K-GEVATLAAN--A-GGK-V-Q-S-A-V-K-AL-GWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-b]_JX863286 [unk-env1-b] MALINA_OTU25_369_M_env_samples_JX863286 gi|425477522|gb|JX863286| Uncultured bacterium clone MALINA OTU25 369 M putative proteorhodopsin mRNA, partial cds Uncultured bacterium clone MALINA OTU25 369 M putative proteorhodopsin mRNA, partial cds JX863286 [[root proteorhodopsin/env cluster 1/B subcluster]] root proteorhodopsin env cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 mRNA other 27-FEB-2013 02Aug2009 3m_depth Arctic Ocean marine 69.61 -138.23 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGACCTTGACGGTGCCCTTGATGTGTGTCGAATTTTACCTCATCACGAAAAAAGCGGGCGGAACGATATCCTTGCTCTGGAAACTCATTCTTGCTTCAGTTGCGATGTTGATGCTAGGCTATATTGGTGAAGCGTTTTATGCCAATGAGACCCAATCCTGGGTTTGGGGGGCCCTGTCTGGTGCTGCATACTTCTACATCGTTTGGATGGTTTGGAAGGGCGAAGTGGCAGAACTTGCCGCAAATGCAGGTGGAAACGTTCAAAAGGCCGTGAATGCCTTAATGAAGTTTGTTGTGATT WTLTVPLMCVEFYLITKKAGGTISLLWKLILASVAMLMLGYIGEAFYANETQSWVWGALSGAAYFYIVWMVWKGEVAELAANAGGNVQKAVNALMKFVVI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------ACCTTGACGGTGCCCTTGATGTGTGTCGAATTTTACCTCATCACGAAAAAA---------GCG------GGCGGAACGATA---TCCTTG------------------------------------CTCTGGAAA---CTCATTCTTGCTTCAGTTGCGATGTTGATGCTAGGCTATATTGGTGAA---------GCG------------------TTT------TATGCC------------------------------------------------------AAT---------GAG---------------------------ACCCAATCC------------------TGGGTTTGG---GGGGCCCTGTCTGGTGCTGCATACTTCTACATCGTTTGGATGGTT---------------TGG------AAG---GGCGAAGTGGCAGAACTTGCCGCAAAT------GCA---GGTGGAAAC---GTT---CAA---AAG---GCC---GTG---AAT---GCCTTA---ATGAAGTTTGTTGTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------TLTVPLMCVEFYLITKK---A--GGTI-SL------------LWK-LILASVAMLMLGYIGE---A------F--YA------------------N---E---------TQS------WVW-GALSGAAYFYIVWMV-----W--K-GEVAELAAN--A-GGN-V-Q-K-A-V-N-AL-MKFVVI-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-b]_JX863188 [unk-env1-b] MALINA_OTU25_420_M_env_samples_JX863188 gi|425477326|gb|JX863188| Uncultured bacterium clone MALINA OTU25 420 M putative proteorhodopsin gene, partial cds Uncultured bacterium clone MALINA OTU25 420 M putative proteorhodopsin gene, partial cds JX863188 [[root proteorhodopsin/env cluster 1/B subcluster]] root proteorhodopsin env cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic_DNA other 01-DEC-2012 16Aug2009 0m_depth Arctic Ocean marine 69.51 -133.42 Ecological Significance of Proteorhodopsincontaining Bacteria in the Western Arctic Ocean Boeuf,D., Lami,R., Marie,D., Cunnington,E., Lebaron,P. and Jeanthon,C. Unpublished #na #na TGGACCTTGACGGTGCCCTTGATGTGTGTCGAATTTTACCTCATCACGAAAAAAGCGGGCGGAACGATATCCTTGCTCTGGAAACTCATCCTTGCTTCAGTTGCGATGTTGATGCTAGGCTATATTGGTGAAGCGTTTTATGCCAATGAGACCCAATCCTGGGTTTGGGGGGCCCTGTCTGGTGCTGCATACTTCTACATCGTTTGGGTGGTTTGGAAGGGCGAAGTGGCAGAACTTGCCGCAAATGCAGGTGGAAACGTTCAAAAGGCCGTGAATGCCTTAATGAAGTTTGTTGTGATT WTLTVPLMCVEFYLITKKAGGTISLLWKLILASVAMLMLGYIGEAFYANETQSWVWGALSGAAYFYIVWVVWKGEVAELAANAGGNVQKAVNALMKFVVI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------ACCTTGACGGTGCCCTTGATGTGTGTCGAATTTTACCTCATCACGAAAAAA---------GCG------GGCGGAACGATA---TCCTTG------------------------------------CTCTGGAAA---CTCATCCTTGCTTCAGTTGCGATGTTGATGCTAGGCTATATTGGTGAA---------GCG------------------TTT------TATGCC------------------------------------------------------AAT---------GAG---------------------------ACCCAATCC------------------TGGGTTTGG---GGGGCCCTGTCTGGTGCTGCATACTTCTACATCGTTTGGGTGGTT---------------TGG------AAG---GGCGAAGTGGCAGAACTTGCCGCAAAT------GCA---GGTGGAAAC---GTT---CAA---AAG---GCC---GTG---AAT---GCCTTA---ATGAAGTTTGTTGTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------TLTVPLMCVEFYLITKK---A--GGTI-SL------------LWK-LILASVAMLMLGYIGE---A------F--YA------------------N---E---------TQS------WVW-GALSGAAYFYIVWVV-----W--K-GEVAELAAN--A-GGN-V-Q-K-A-V-N-AL-MKFVVI-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-b]_EU915944 [unk-env1-b] clone_HO15-4_EU915944 gi|229358770|gb|EU915944| Uncultured bacterium clone HO15-4 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone HO15-4 putative proteorhodopsin gene, partial cds. EU915944 [[root proteorhodopsin/env cluster 1/B subcluster]] root proteorhodopsin env cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGTATTCTTCTTTGAGCGCGGTCGTGTGGCCGACGAATGGAAGTCGAGTTTATTGGTTTCTGGTTTGGTTACTGGTATCGCTGCAGTTCACTACTACTACATGCGTGACTACTATCAGGCTACTCACGAAACCCCTGTTGCTTTGCGTTACATCGATTGGACCTTGACGGTTCCCTTGATGTGCGTGGAATTTTATCTCATCACGAAAAAAGCAGGCGGCACATCTGCATTGTTGTGGAAGTTGATTTTGGCTTCTGTAGCGATGTTGGTGCTGGGCTACATCGGCGAAGCGTTCTACGCGGACCAAACCCAGTCATGGGTATGGGGTGCGTTGTCAGGCGCTGCGTACTTCTACATCGTATGGATGGTTTGGAAGGGCGAAGTAGCTACGCTTGCAGCTAGCGCAGGTGGCAACGTTCAAAAGGCGGTTGACGCCTTGATGAAGTTTGTTGTCATCGGATGGGCGATCTAC MVAATVFFFERGRVADEWKSSLLVSGLVTGIAAVHYYYMRDYYQATHETPVALRYIDWTLTVPLMCVEFYLITKKAGGTSALLWKLILASVAMLVLGYIGEAFYADQTQSWVWGALSGAAYFYIVWMVWKGEVATLAASAGGNVQKAVDALMKFVVIGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGTATTCTTCTTT---GAGCGCGGTCGTGTGGCCGACGAATGGAAGTCGAGTTTATTGGTTTCTGGTTTGGTTACTGGTATCGCTGCAGTTCACTACTACTACATGCGTGACTACTATCAG---------------------------------------------------GCTACTCACGAAACCCCTGTTGCTTTGCGTTACATCGATTGG------------------------ACCTTGACGGTTCCCTTGATGTGCGTGGAATTTTATCTCATCACGAAAAAA---------GCA------GGCGGCACATCT---GCATTG------------------------------------TTGTGGAAG---TTGATTTTGGCTTCTGTAGCGATGTTGGTGCTGGGCTACATCGGCGAA---------GCG------------------TTC------TACGCG------------------------------------------------------GAC---------CAA---------------------------ACCCAGTCA------------------TGGGTATGG---GGTGCGTTGTCAGGCGCTGCGTACTTCTACATCGTATGGATGGTT---------------TGG------AAG---GGCGAAGTAGCTACGCTTGCAGCTAGC------GCA---GGTGGCAAC---GTT---CAA---AAG---GCG---GTT---GAC---GCCTTG---ATGAAGTTTGTTGTCATC---------------------------------------------------------------GGATGG---------GCGATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFF-ERGRVADEWKSSLLVSGLVTGIAAVHYYYMRDYYQ-----------------ATHETPVALRYIDW--------TLTVPLMCVEFYLITKK---A--GGTS-AL------------LWK-LILASVAMLVLGYIGE---A------F--YA------------------D---Q---------TQS------WVW-GALSGAAYFYIVWMV-----W--K-GEVATLAAS--A-GGN-V-Q-K-A-V-D-AL-MKFVVI---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env1-b]_EF079857 [unk-env1-b] clone_ID11056_EF079857 gi|126361803|gb|EF079857| Uncultured bacterium clone ID11056 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone ID11056 putative proteorhodopsin gene, partial cds. EF079857 [[root proteorhodopsin/env cluster 1/B subcluster]] root proteorhodopsin env cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-oct-07 #na #na Indian Ocean marine #na Proteorhodopsin diversity Jiao,N.Z. and Wei,B. Unpublished #na #na ATGGTTGCCGCTACTGTTTTCTTCTTGTTCGAACGCGGTCGGGTTGCCGATCAGTGGAAATCCTCCTTGTTGGTATCCGGTTTGATCACCGGGATCGCAGCCGTGCACTACTACTACATGCGCGACTACTGGATGGAAGCTGGTGAATCCCCCGTGGTTTTGCGCTACATCGACTGGACGTTGACCGTGCCTTTGATGTGCGTGGAATTCTACCTGATCACCAAAAAAGCCGGTGCTAAAATGGGCTTGTTGTGGAAGTTGATCGCAGCTTCTGTAGCGATGTTGGTGTTGGGCTACGTAGGTGAGGCCGTTTACGCTGGTGAGCAGTACGCAACCCAGCAATGGGTTTACGGTGCTTTGTCCGGATTGGCATACTTCTACATTTTGTGGTTGGTATGGAAGGGCGACGTTGCTCAATTGGCTGCAAACGCAGGTCCAAGTGTAGCAACTGCTGTACGTCACTTACGCAATTTCGTGTTGGTGGGGTGGGCCATCTACCCA MVAATVFFLFERGRVADQWKSSLLVSGLITGIAAVHYYYMRDYWMEAGESPVVLRYIDWTLTVPLMCVEFYLITKKAGAKMGLLWKLIAASVAMLVLGYVGEAVYAGEQYATQQWVYGALSGLAYFYILWLVWKGDVAQLAANAGPSVATAVRHLRNFVLVGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCGCTACTGTTTTCTTCTTGTTCGAACGCGGTCGGGTTGCCGATCAGTGGAAATCCTCCTTGTTGGTATCCGGTTTGATCACCGGGATCGCAGCCGTGCACTACTACTACATGCGCGACTACTGGATG---------------------------------------------------GAAGCTGGTGAATCCCCCGTGGTTTTGCGCTACATCGACTGG------------------------ACGTTGACCGTGCCTTTGATGTGCGTGGAATTCTACCTGATCACCAAAAAA---------GCC------GGTGCTAAAATG---GGCTTG------------------------------------TTGTGGAAG---TTGATCGCAGCTTCTGTAGCGATGTTGGTGTTGGGCTACGTAGGTGAG---------GCC------------------GTT------TACGCT------------------------------------------------------GGT---------GAGCAGTACGCA------------------ACCCAGCAA------------------TGGGTTTAC---GGTGCTTTGTCCGGATTGGCATACTTCTACATTTTGTGGTTGGTA---------------TGG------AAG---GGCGACGTTGCTCAATTGGCTGCAAAC------GCA---GGTCCAAGT---GTA---GCA---ACT---GCT---GTA---CGT---CACTTA---CGCAATTTCGTGTTGGTG---------------------------------------------------------------GGGTGG---------GCCATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFLFERGRVADQWKSSLLVSGLITGIAAVHYYYMRDYWM-----------------EAGESPVVLRYIDW--------TLTVPLMCVEFYLITKK---A--GAKM-GL------------LWK-LIAASVAMLVLGYVGE---A------V--YA------------------G---EQYA------TQQ------WVY-GALSGLAYFYILWLV-----W--K-GDVAQLAAN--A-GPS-V-A-T-A-V-R-HL-RNFVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env1-b]_DQ927031 [unk-env1-b] clone_AT06025_DQ927031 gi|116294177|gb|DQ927031| Uncultured bacterium clone AT06025 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone AT06025 putative proteorhodopsin gene, partial cds. DQ927031 [[root proteorhodopsin/env cluster 1/B subcluster]] root proteorhodopsin env cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2006 #na surface water Atlantic Ocean marine #na Proteorhodopsin diversity Jiao,N. and Wei,B. Unpublished #na #na ATGGTAGCCGCTACGGTTTTCTTCTTCGAGATGTGGAACGTCGACAAGAAGTGGCGTACCTCTCTCCTCGTGAGTGGATTGATCACGTTCATCGCGTTCGTCCACTACTACTACATGAGGGGATTCTACCTCGAGACGGGCACGAGCCCGACGTTCTTCCGCTACGTGGACTGGACCCTGACGGTCCCACTCATGTGCGTGGAGTTCTACCTCATCACCAAAAAGGCCGGTGGCACCATGGGCCTGATGTGGAAGCTTATCTTCGCTTCAGTCGTGATGCTTGTCACGGGTTACTTCGGTGAGGCCGTGTACCGCGATCAGGCATGGCTCTGGGGTCTCTTCTCCGGTCTCGCCTACTTCTACATCGTTTACCTCGTCTTCTCCGGTGAGGTGAAGCAGCTGGCCGACAGCGCCGGAGGCGCTGTGGCCGAGGCCAACAAGTGGCTGGGTCGCTTCGTGCTCGTCGGGTGGGCCATCATCCCA MVAATVFFFEMWNVDKKWRTSLLVSGLITFIAFVHYYYMRGFYLETGTSPTFFRYVDWTLTVPLMCVEFYLITKKAGGTMGLMWKLIFASVVMLVTGYFGEAVYRDQAWLWGLFSGLAYFYIVYLVFSGEVKQLADSAGGAVAEANKWLGRFVLVGWAIIP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACGGTT---TTCTTCTTCGAGATGTGGAACGTCGACAAGAAGTGGCGTACCTCTCTCCTCGTGAGTGGATTGATCACGTTCATCGCGTTCGTCCACTACTACTACATGAGGGGATTCTACCTC---------------------------------------------------GAGACGGGCACGAGCCCGACGTTCTTCCGCTACGTGGACTGG------------------------ACCCTGACGGTCCCACTCATGTGCGTGGAGTTCTACCTCATCACCAAAAAG---------GCC------GGTGGCACCATG---GGCCTG------------------------------------ATGTGGAAG---CTTATCTTCGCTTCAGTCGTGATGCTTGTCACGGGTTACTTCGGTGAG---------GCC------------------GTG------TACCGC------------------------------------------------------------------------------------------------GATCAGGCA------------------TGGCTCTGG---GGTCTCTTCTCCGGTCTCGCCTACTTCTACATCGTTTACCTCGTC---------------TTC------TCC---GGTGAGGTGAAGCAGCTGGCCGACAGC------GCC---GGAGGCGCT---GTG---GCC---GAG---GCC---AAC---AAG---TGGCTG---GGTCGCTTCGTGCTCGTC---------------------------------------------------------------GGGTGG---------GCCATCATCCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------MVAATV-FFFEMWNVDKKWRTSLLVSGLITFIAFVHYYYMRGFYL-----------------ETGTSPTFFRYVDW--------TLTVPLMCVEFYLITKK---A--GGTM-GL------------MWK-LIFASVVMLVTGYFGE---A------V--YR--------------------------------DQA------WLW-GLFSGLAYFYIVYLV-----F--S-GEVKQLADS--A-GGA-V-A-E-A-N-K-WL-GRFVLV---------------------GW---AIIP-------------------------------------------------------------------------------------------------- [unk-env1-b]_EU915945 [unk-env1-b] clone_HO15-18_EU915945 gi|229358772|gb|EU915945| Uncultured bacterium clone HO15-18 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone HO15-18 putative proteorhodopsin gene, partial cds. EU915945 [[root proteorhodopsin/env cluster 1/B subcluster]] root proteorhodopsin env cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTAGCCGCTACTGTGTTCTTCTTCTTCGAGATGTGGAACGTCGACAAGAAGTGGCGTACCTCTCTCCTCGTGAGTGGATTGATCACGTTCATCGCGTTCGTCCACTACTACTACATGCGGGGATTCTACCTCGAGACGGGCACCAGCCCGACGTTCTTCCGCTACGTGGACTGGACCCTGACGGTCCCGCTCATGTGCGTGGAGTTCTACCTCATCACCAAGAAGGCTGGTGGCACCATGGGCCTCATGTGGAAGCTCATCTTCGCTTCCGTCGTGATGCTCGTCACCGGATACTTCGGTGAGGCCGTGTACCGCGATCAGGCTTGGCTCTGGGGTCTCTTCTCCGGCATCGCCTACTTCTACATCGTGTACCTGGTCTTCTCCGGTGAGGTGAAGCAACTCGCTGACAGCGCCGGTGGTGCAGTCGCTGAGGCCAACAACTGGCTGGGCCGCTTCGTGCTCGTCGGCTGGGCCATCTAC MVAATVFFFFEMWNVDKKWRTSLLVSGLITFIAFVHYYYMRGFYLETGTSPTFFRYVDWTLTVPLMCVEFYLITKKAGGTMGLMWKLIFASVVMLVTGYFGEAVYRDQAWLWGLFSGIAYFYIVYLVFSGEVKQLADSAGGAVAEANNWLGRFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTAGCCGCTACTGTGTTCTTCTTCTTCGAGATGTGGAACGTCGACAAGAAGTGGCGTACCTCTCTCCTCGTGAGTGGATTGATCACGTTCATCGCGTTCGTCCACTACTACTACATGCGGGGATTCTACCTC---------------------------------------------------GAGACGGGCACCAGCCCGACGTTCTTCCGCTACGTGGACTGG------------------------ACCCTGACGGTCCCGCTCATGTGCGTGGAGTTCTACCTCATCACCAAGAAG---------GCT------GGTGGCACCATG---GGCCTC------------------------------------ATGTGGAAG---CTCATCTTCGCTTCCGTCGTGATGCTCGTCACCGGATACTTCGGTGAG---------GCC------------------GTG------TACCGC------------------------------------------------------------------------------------------------GATCAGGCT------------------TGGCTCTGG---GGTCTCTTCTCCGGCATCGCCTACTTCTACATCGTGTACCTGGTC---------------TTC------TCC---GGTGAGGTGAAGCAACTCGCTGACAGC------GCC---GGTGGTGCA---GTC---GCT---GAG---GCC---AAC---AAC---TGGCTG---GGCCGCTTCGTGCTCGTC---------------------------------------------------------------GGCTGG---------GCCATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MVAATVFFFFEMWNVDKKWRTSLLVSGLITFIAFVHYYYMRGFYL-----------------ETGTSPTFFRYVDW--------TLTVPLMCVEFYLITKK---A--GGTM-GL------------MWK-LIFASVVMLVTGYFGE---A------V--YR--------------------------------DQA------WLW-GLFSGIAYFYIVYLV-----F--S-GEVKQLADS--A-GGA-V-A-E-A-N-N-WL-GRFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env1-b]_EU563311 [unk-env1-b] kin_2m_Jan07D_env_samples_EU563311 gi|171770632|gb|EU563311| Uncultured microorganism clone kin 2m Jan07D putative proteorhodopsin gene, partial cds Uncultured microorganism clone kin 2m Jan07D putative proteorhodopsin gene, partial cds EU563311 [[root proteorhodopsin/env cluster 1/B subcluster]] root proteorhodopsin env cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 01-janv-07 Lake_Kinneret_at_2m_depth other freshwater 32.08 35.07 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na AGATATGTTGATTGGTTATTGACAGTGCCCCTGATGTGTGTTGAGTTTTATCTCATCACAAAGAAAGCAGGCGCGACGATTGGTCTTTTATGGAAATTGATCATTGCTTCAATTTTCATGTTGGTGACAGGTTATATCGGTGAAGCTATGCATGGACAAGATGCCTCCAGCTGGTTTTGGGGTACAATCTCATCCATCGGCTATGCTTATATCGTTTGGTTAGTATGGGCAGGCGATGTAGCCAAATTGGCAAAATCTTCTTCACCTGCAGTTGCAGCAGCAAATCGTTATCTCGGTTGGTTCGTGCTTGTAGGGTGGGTTATTTATCCA RYVDWLLTVPLMCVEFYLITKKAGATIGLLWKLIIASIFMLVTGYIGEAMHGQDASSWFWGTISSIGYAYIVWLVWAGDVAKLAKSSSPAVAAANRYLGWFVLVGWVIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATGTTGATTGG------------------------TTATTGACAGTGCCCCTGATGTGTGTTGAGTTTTATCTCATCACAAAGAAA---------GCA------GGCGCGACGATT---GGTCTT------------------------------------TTATGGAAA---TTGATCATTGCTTCAATTTTCATGTTGGTGACAGGTTATATCGGTGAA---------GCT------------------ATG------CATGGA------------------------------------------------------CAA---------GAT---------------------------GCCTCCAGC------------------TGGTTTTGG---GGTACAATCTCATCCATCGGCTATGCTTATATCGTTTGGTTAGTA---------------TGG------GCA---GGCGATGTAGCCAAATTGGCAAAATCT------TCT---TCACCTGCA---GTT---GCA---GCA---GCA---AAT---CGT---TATCTC---GGTTGGTTCGTGCTTGTA---------------------------------------------------------------GGGTGG---------GTTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLMCVEFYLITKK---A--GATI-GL------------LWK-LIIASIFMLVTGYIGE---A------M--HG------------------Q---D---------ASS------WFW-GTISSIGYAYIVWLV-----W--A-GDVAKLAKS--S-SPA-V-A-A-A-N-R-YL-GWFVLV---------------------GW---VIYP-------------------------------------------------------------------------------------------------- [unk-env1-b]_EU563310 [unk-env1-b] kin_6m_Jan07G_env_samples_EU563310 gi|171770630|gb|EU563310| Uncultured microorganism clone kin 6m Jan07G putative proteorhodopsin gene, partial cds Uncultured microorganism clone kin 6m Jan07G putative proteorhodopsin gene, partial cds EU563310 [[root proteorhodopsin/env cluster 1/B subcluster]] root proteorhodopsin env cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 01-janv-07 Lake_Kinneret_at_6m_depth other freshwater 32.08 35.07 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na AGATATGTTGATTGGTTATTGACAGTGCCCCTGATGTGTGTTGAGTTTTATCTCATCACAAAGAAAGCAGGCGCGACGATTGGTCTTTTATGGAAATTGATCATTGCTTCAATTTTCATGTTGGTGACAGGTTATATCGGTGAAGCTATGCATGGACAAGATGCCTCCAGCTGGTTTTGGGGTACAATCTCATCCATCGGCTATGCTTATATCGTTTGGTTAGTATGGGCAGGCGATGTAGCCAAATTGGCAAAATCTTCTTCACCTGCAGTTGCAGCAGCAAATCGTTATCTCGGTTGGTTCGTGCTTGTAGGGTGGGTTATTTATCCA RYVDWLLTVPLMCVEFYLITKKAGATIGLLWKLIIASIFMLVTGYIGEAMHGQDASSWFWGTISSIGYAYIVWLVWAGDVAKLAKSSSPAVAAANRYLGWFVLVGWVIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATGTTGATTGG------------------------TTATTGACAGTGCCCCTGATGTGTGTTGAGTTTTATCTCATCACAAAGAAA---------GCA------GGCGCGACGATT---GGTCTT------------------------------------TTATGGAAA---TTGATCATTGCTTCAATTTTCATGTTGGTGACAGGTTATATCGGTGAA---------GCT------------------ATG------CATGGA------------------------------------------------------CAA---------GAT---------------------------GCCTCCAGC------------------TGGTTTTGG---GGTACAATCTCATCCATCGGCTATGCTTATATCGTTTGGTTAGTA---------------TGG------GCA---GGCGATGTAGCCAAATTGGCAAAATCT------TCT---TCACCTGCA---GTT---GCA---GCA---GCA---AAT---CGT---TATCTC---GGTTGGTTCGTGCTTGTA---------------------------------------------------------------GGGTGG---------GTTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLMCVEFYLITKK---A--GATI-GL------------LWK-LIIASIFMLVTGYIGE---A------M--HG------------------Q---D---------ASS------WFW-GTISSIGYAYIVWLV-----W--A-GDVAKLAKS--S-SPA-V-A-A-A-N-R-YL-GWFVLV---------------------GW---VIYP-------------------------------------------------------------------------------------------------- [unk-env1-b]_EU563308 [unk-env1-b] Kin_6m_jan07C_env_samples_EU563308 gi|171770626|gb|EU563308| Uncultured microorganism clone Kin 6m jan07C putative proteorhodopsin gene, partial cds Uncultured microorganism clone Kin 6m jan07C putative proteorhodopsin gene, partial cds EU563308 [[root proteorhodopsin/env cluster 1/B subcluster]] root proteorhodopsin env cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 01-janv-07 Lake_Kinneret_at_6m_depth other freshwater 32.08 35.07 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na AGGTACGTTGATTGGTTATTGACAGTGCCCCTGATGTGTGTTGAGTTTTATCTCATCACAAAGAAAGCAGGCGCGACGATTGGTCTTTTATGGAAATTGATCATTGCTTCAATTTTCATGTTGGTGACAGGTTATATCGGTGAAGCTATGCATGGACAAGATGCCTCCAGCTGGGTTTGGGGTACAATCTCATCCATCGGCTATGCTTATATCGTTTGGTTAGTATGGGCAGGCGATGTAGCCAAATTGGCAAAATCTTCTTCACCTGCAGTTGCAGCAGCAAATCGTTATCTCGGTTGGTTCGTGCTTGTAGGGTGGGTTATTTATCCA RYVDWLLTVPLMCVEFYLITKKAGATIGLLWKLIIASIFMLVTGYIGEAMHGQDASSWVWGTISSIGYAYIVWLVWAGDVAKLAKSSSPAVAAANRYLGWFVLVGWVIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACGTTGATTGG------------------------TTATTGACAGTGCCCCTGATGTGTGTTGAGTTTTATCTCATCACAAAGAAA---------GCA------GGCGCGACGATT---GGTCTT------------------------------------TTATGGAAA---TTGATCATTGCTTCAATTTTCATGTTGGTGACAGGTTATATCGGTGAA---------GCT------------------ATG------CATGGA------------------------------------------------------CAA---------GAT---------------------------GCCTCCAGC------------------TGGGTTTGG---GGTACAATCTCATCCATCGGCTATGCTTATATCGTTTGGTTAGTA---------------TGG------GCA---GGCGATGTAGCCAAATTGGCAAAATCT------TCT---TCACCTGCA---GTT---GCA---GCA---GCA---AAT---CGT---TATCTC---GGTTGGTTCGTGCTTGTA---------------------------------------------------------------GGGTGG---------GTTATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLMCVEFYLITKK---A--GATI-GL------------LWK-LIIASIFMLVTGYIGE---A------M--HG------------------Q---D---------ASS------WVW-GTISSIGYAYIVWLV-----W--A-GDVAKLAKS--S-SPA-V-A-A-A-N-R-YL-GWFVLV---------------------GW---VIYP-------------------------------------------------------------------------------------------------- [unk-env1-b]_EU563313 [unk-env1-b] kin_6m_Jan07I_env_samples_EU563313 gi|171770636|gb|EU563313| Uncultured microorganism clone kin 6m Jan07I putative proteorhodopsin gene, partial cds Uncultured microorganism clone kin 6m Jan07I putative proteorhodopsin gene, partial cds EU563313 [[root proteorhodopsin/env cluster 1/B subcluster]] root proteorhodopsin env cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 01-janv-07 Lake_Kinneret_at_6m_depth other freshwater 32.08 35.07 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na AGCTATGTTGACTGGTTATTGACAGTGCCCCTGATGTGTGTTGAGTTTTATCTCATCACAAAGAAAGCAGGCGCGACGATTGGTCTTTTATGGAAATTGATCATTGCTTCAATTTTCATGTTGGTGACAGGTTATATCGGTGAAGCTATGCATGGACAAGATGCCTCCAGCTGGGTTTGGGGTACAATCTCATCCATCGGCTATGCTTATATCGTTTGGTTAGTATGGGCAGGCGATGTAGCCAAATTGGCAAAATCTTCTTCACCTGCAGTTGCAGCAGCAAATCGTTATCTCGGTTGGTTCGTGCTTGTAGGTTGGACTATCTACCCA SYVDWLLTVPLMCVEFYLITKKAGATIGLLWKLIIASIFMLVTGYIGEAMHGQDASSWVWGTISSIGYAYIVWLVWAGDVAKLAKSSSPAVAAANRYLGWFVLVGWTIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATGTTGACTGG------------------------TTATTGACAGTGCCCCTGATGTGTGTTGAGTTTTATCTCATCACAAAGAAA---------GCA------GGCGCGACGATT---GGTCTT------------------------------------TTATGGAAA---TTGATCATTGCTTCAATTTTCATGTTGGTGACAGGTTATATCGGTGAA---------GCT------------------ATG------CATGGA------------------------------------------------------CAA---------GAT---------------------------GCCTCCAGC------------------TGGGTTTGG---GGTACAATCTCATCCATCGGCTATGCTTATATCGTTTGGTTAGTA---------------TGG------GCA---GGCGATGTAGCCAAATTGGCAAAATCT------TCT---TCACCTGCA---GTT---GCA---GCA---GCA---AAT---CGT---TATCTC---GGTTGGTTCGTGCTTGTA---------------------------------------------------------------GGTTGG---------ACTATCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYVDW--------LLTVPLMCVEFYLITKK---A--GATI-GL------------LWK-LIIASIFMLVTGYIGE---A------M--HG------------------Q---D---------ASS------WVW-GTISSIGYAYIVWLV-----W--A-GDVAKLAKS--S-SPA-V-A-A-A-N-R-YL-GWFVLV---------------------GW---TIYP-------------------------------------------------------------------------------------------------- [unk-env1-b]_EU563280 [unk-env1-b] KINPRK15_env_samples_EU563280 gi|171770570|gb|EU563280| Uncultured microorganism clone KINPRK15 putative proteorhodopsin gene, partial cds Uncultured microorganism clone KINPRK15 putative proteorhodopsin gene, partial cds EU563280 [[root proteorhodopsin/env cluster 1/B subcluster]] root proteorhodopsin env cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 2003 Lake_Kinneret other freshwater 32.08 35.07 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na TTACGCTATGTGGATTGGTTATTGACAGTGCCCCTGATGTGTGTTGAGTTTTATCTCATCACAAAGAAAGCAGGCGCGACGATTGGTCTTTTATGGAAATTGATCATTGCTTCAATTTTCATGTTGGTGACAGGTTATATCGGTGAAGCTATGCATGGACAAGATGCCTCCAGCTGGGTTTGGGGTACAATCTCATCCATCGGCTATGCTTATATCGTTTGGTTAGTATGGGCAGGCGATGTAGCCAAATTGGCAAAATCTTCTTCACCTGCAGTTGCAGCAGCAAATCGTTATCTCGGTTGGTTCGTGCTTGTAGGTTGGGCGATTTACCCA LRYVDWLLTVPLMCVEFYLITKKAGATIGLLWKLIIASIFMLVTGYIGEAMHGQDASSWVWGTISSIGYAYIVWLVWAGDVAKLAKSSSPAVAAANRYLGWFVLVGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACGCTATGTGGATTGG------------------------TTATTGACAGTGCCCCTGATGTGTGTTGAGTTTTATCTCATCACAAAGAAA---------GCA------GGCGCGACGATT---GGTCTT------------------------------------TTATGGAAA---TTGATCATTGCTTCAATTTTCATGTTGGTGACAGGTTATATCGGTGAA---------GCT------------------ATG------CATGGA------------------------------------------------------CAA---------GAT---------------------------GCCTCCAGC------------------TGGGTTTGG---GGTACAATCTCATCCATCGGCTATGCTTATATCGTTTGGTTAGTA---------------TGG------GCA---GGCGATGTAGCCAAATTGGCAAAATCT------TCT---TCACCTGCA---GTT---GCA---GCA---GCA---AAT---CGT---TATCTC---GGTTGGTTCGTGCTTGTA---------------------------------------------------------------GGTTGG---------GCGATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRYVDW--------LLTVPLMCVEFYLITKK---A--GATI-GL------------LWK-LIIASIFMLVTGYIGE---A------M--HG------------------Q---D---------ASS------WVW-GTISSIGYAYIVWLV-----W--A-GDVAKLAKS--S-SPA-V-A-A-A-N-R-YL-GWFVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env1-b]_EU563309 [unk-env1-b] Kin_6m_Jan07F_env_samples_EU563309 gi|171770628|gb|EU563309| Uncultured microorganism clone Kin 6m Jan07F putative proteorhodopsin gene, partial cds Uncultured microorganism clone Kin 6m Jan07F putative proteorhodopsin gene, partial cds EU563309 [[root proteorhodopsin/env cluster 1/B subcluster]] root proteorhodopsin env cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 01-janv-07 Lake_Kinneret_at_6m_depth other freshwater 32.08 35.07 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na CGGTATGTGGACTGGTTATTGACAGTGCCCCTGATGTGTGTTGAGTTTTATCTCATCACAAAGAAAGCAGGCGCGACGATTGGTCTTTTATGGAAATTGATCATTGCTTCAATTTTCATGTTGGTGACAGGTTATATCGGTGAAGCTATGCATGGACAAGATGCCTCCAGCTGGGTTTGGGGTACAATCTCATCCATCGGCTATGCTTATATCGTTTGGTTAGTATGGGCAGGCGATGTAGCCAAATTGGCAAAATCTTCTTCACCTGCAGTTGCAGCAGCAAATCGTTATCTCGGTTGGTTCGTGCTTGTAGGCTGGGTCATTTACCCA RYVDWLLTVPLMCVEFYLITKKAGATIGLLWKLIIASIFMLVTGYIGEAMHGQDASSWVWGTISSIGYAYIVWLVWAGDVAKLAKSSSPAVAAANRYLGWFVLVGWVIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTATGTGGACTGG------------------------TTATTGACAGTGCCCCTGATGTGTGTTGAGTTTTATCTCATCACAAAGAAA---------GCA------GGCGCGACGATT---GGTCTT------------------------------------TTATGGAAA---TTGATCATTGCTTCAATTTTCATGTTGGTGACAGGTTATATCGGTGAA---------GCT------------------ATG------CATGGA------------------------------------------------------CAA---------GAT---------------------------GCCTCCAGC------------------TGGGTTTGG---GGTACAATCTCATCCATCGGCTATGCTTATATCGTTTGGTTAGTA---------------TGG------GCA---GGCGATGTAGCCAAATTGGCAAAATCT------TCT---TCACCTGCA---GTT---GCA---GCA---GCA---AAT---CGT---TATCTC---GGTTGGTTCGTGCTTGTA---------------------------------------------------------------GGCTGG---------GTCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLMCVEFYLITKK---A--GATI-GL------------LWK-LIIASIFMLVTGYIGE---A------M--HG------------------Q---D---------ASS------WVW-GTISSIGYAYIVWLV-----W--A-GDVAKLAKS--S-SPA-V-A-A-A-N-R-YL-GWFVLV---------------------GW---VIYP-------------------------------------------------------------------------------------------------- [unk-env1-b]_JX169797 [unk-env1-b] clone_pop8_JX169797 gi|430768657|gb|JX169797| Uncultured prokaryote clone pop8 rhodopsin gene, partial cds. Uncultured prokaryote clone pop8 rhodopsin gene, partial cds. JX169797 [[root proteorhodopsin/env cluster 1/B subcluster]] root proteorhodopsin env cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:198431 genomic DNA other 18-janv-13 26-nov-08 freshwater from Ganges River other freshwater 25.278395 83.016214 Characterization of the chimeric seven-transmembrane protein containing conserved region of helix C-F of microbial rhodopsin from Ganges River Choi,A.R., Kim,S.J., Jung,B.H. and Jung,K.H. Appl. Microbiol. Biotechnol. 97 (2), 819-828 (2013) 23151811 #na CTCCGTTATGTTGATTGGTTATTGACAGTGCCCCTGATGTGTGTTGAGTTTTATCTCATCACAAAGAAAGCAGGCGCGACGATTGGTCTTTTATGGAAATTGATCATTGCTTCAATTTTCATGTTGGTGACAGGTTATATCGGTGAAGCGATGCATGGACAAGATGCCTCCAGCTGGGTTTGGGGTACAATCTCATCCATCGGCTATGCGTATATCGTTTGGTTAGTATGGGCAGGCGATGTAGCCAAATTGGCAAAATCTTCTTCACCTGCAGTTGCAGCAGCAAATCGTTATCTCGGTTGGTTTGTGCTTGTTGGTTGGGCGATTTACCCG LRYVDWLLTVPLMCVEFYLITKKAGATIGLLWKLIIASIFMLVTGYIGEAMHGQDASSWVWGTISSIGYAYIVWLVWAGDVAKLAKSSSPAVAAANRYLGWFVLVGWAIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCGTTATGTTGATTGG------------------------TTATTGACAGTGCCCCTGATGTGTGTTGAGTTTTATCTCATCACAAAGAAA---------GCA------GGCGCGACGATT---GGTCTT------------------------------------TTATGGAAA---TTGATCATTGCTTCAATTTTCATGTTGGTGACAGGTTATATCGGTGAA---------GCG------------------ATG------CATGGA------------------------------------------------------CAA---------GAT---------------------------GCCTCCAGC------------------TGGGTTTGG---GGTACAATCTCATCCATCGGCTATGCGTATATCGTTTGGTTAGTA---------------TGG------GCA---GGCGATGTAGCCAAATTGGCAAAATCT------TCT---TCACCTGCA---GTT---GCA---GCA---GCA---AAT---CGT---TATCTC---GGTTGGTTTGTGCTTGTT---------------------------------------------------------------GGTTGG---------GCGATTTACCCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRYVDW--------LLTVPLMCVEFYLITKK---A--GATI-GL------------LWK-LIIASIFMLVTGYIGE---A------M--HG------------------Q---D---------ASS------WVW-GTISSIGYAYIVWLV-----W--A-GDVAKLAKS--S-SPA-V-A-A-A-N-R-YL-GWFVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env1-b]_EU563320 [unk-env1-b] Kin_2m_Jan07B_env_samples_EU563320 gi|171770650|gb|EU563320| Uncultured microorganism clone Kin 2m Jan07B putative proteorhodopsin gene, partial cds Uncultured microorganism clone Kin 2m Jan07B putative proteorhodopsin gene, partial cds EU563320 [[root proteorhodopsin/env cluster 1/B subcluster]] root proteorhodopsin env cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 01-janv-07 Lake_Kinneret_at_2m_depth other freshwater 32.08 35.07 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na CGCTATGTGGATTGGCTGCTGACCGTGCCGCTGATGTGCGTGGAATTTTATCTGATTACCAAAAAAGCGGGCGCGACCATTGGCCTGCTGTGGAAACTGATTATTGCGAGCATTTTTATGCTGGTGACCGGCTATATTGGCGAAGCGATGCATGGCCAGGATGCGAGCAGCTGGGTGTGGGGCACCATTAGCAGCATTGGCTATGCGTATATTGTGTGGCTGGTGTGGGCGGGCGATGTGGCGAAACTGGCGAAAAGCAGCAGCCCGGCGGTGGCGGCGGCGAACCGCTATCTGGGCTGGTTTGTGCTGGTGGGCTGGGTGATTTATCCG RYVDWLLTVPLMCVEFYLITKKAGATIGLLWKLIIASIFMLVTGYIGEAMHGQDASSWVWGTISSIGYAYIVWLVWAGDVAKLAKSSSPAVAAANRYLGWFVLVGWVIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTATGTGGATTGG------------------------CTGCTGACCGTGCCGCTGATGTGCGTGGAATTTTATCTGATTACCAAAAAA---------GCG------GGCGCGACCATT---GGCCTG------------------------------------CTGTGGAAA---CTGATTATTGCGAGCATTTTTATGCTGGTGACCGGCTATATTGGCGAA---------GCG------------------ATG------CATGGC------------------------------------------------------CAG---------GAT---------------------------GCGAGCAGC------------------TGGGTGTGG---GGCACCATTAGCAGCATTGGCTATGCGTATATTGTGTGGCTGGTG---------------TGG------GCG---GGCGATGTGGCGAAACTGGCGAAAAGC------AGC---AGCCCGGCG---GTG---GCG---GCG---GCG---AAC---CGC---TATCTG---GGCTGGTTTGTGCTGGTG---------------------------------------------------------------GGCTGG---------GTGATTTATCCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLMCVEFYLITKK---A--GATI-GL------------LWK-LIIASIFMLVTGYIGE---A------M--HG------------------Q---D---------ASS------WVW-GTISSIGYAYIVWLV-----W--A-GDVAKLAKS--S-SPA-V-A-A-A-N-R-YL-GWFVLV---------------------GW---VIYP-------------------------------------------------------------------------------------------------- [unk-env1-b]_EU563324 [unk-env1-b] kin_6m_Jan07D_env_samples_EU563324 gi|171770658|gb|EU563324| Uncultured microorganism clone kin 6m Jan07D putative proteorhodopsin gene, partial cds Uncultured microorganism clone kin 6m Jan07D putative proteorhodopsin gene, partial cds EU563324 [[root proteorhodopsin/env cluster 1/B subcluster]] root proteorhodopsin env cluster 1 B subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 01-janv-07 Lake_Kinneret_at_6m_depth other freshwater 32.08 35.07 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na CGCTATGTGGATTGGCTGCTGACCGTGCCGCTGATGTGCGTGGAATTTTATCTGATTACCAAAAAAGCGGGCGCGACCATTGGCCTGCTGTGGAAACTGATTATTGCGAGCATTTTTATGCTGGTGACCGGCTATATTGGCGAAGCGATGCATGGCCAGGATGCGAGCAGCTGGGTGTGGGGCACCATTAGCAGCATTGGCTATGCGTATATTGTGTGGCTGGTGTGGGCGGGCGATGTGGCGAAACTGGCGAAAAGCAGCAGCCCGGCGGTGGCGGCGGCGAACCGCTATCTGGGCTGGTTTGTGCTGGTGGGCTGGGTGATTTATCCG RYVDWLLTVPLMCVEFYLITKKAGATIGLLWKLIIASIFMLVTGYIGEAMHGQDASSWVWGTISSIGYAYIVWLVWAGDVAKLAKSSSPAVAAANRYLGWFVLVGWVIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTATGTGGATTGG------------------------CTGCTGACCGTGCCGCTGATGTGCGTGGAATTTTATCTGATTACCAAAAAA---------GCG------GGCGCGACCATT---GGCCTG------------------------------------CTGTGGAAA---CTGATTATTGCGAGCATTTTTATGCTGGTGACCGGCTATATTGGCGAA---------GCG------------------ATG------CATGGC------------------------------------------------------CAG---------GAT---------------------------GCGAGCAGC------------------TGGGTGTGG---GGCACCATTAGCAGCATTGGCTATGCGTATATTGTGTGGCTGGTG---------------TGG------GCG---GGCGATGTGGCGAAACTGGCGAAAAGC------AGC---AGCCCGGCG---GTG---GCG---GCG---GCG---AAC---CGC---TATCTG---GGCTGGTTTGTGCTGGTG---------------------------------------------------------------GGCTGG---------GTGATTTATCCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLMCVEFYLITKK---A--GATI-GL------------LWK-LIIASIFMLVTGYIGE---A------M--HG------------------Q---D---------ASS------WVW-GTISSIGYAYIVWLV-----W--A-GDVAKLAKS--S-SPA-V-A-A-A-N-R-YL-GWFVLV---------------------GW---VIYP-------------------------------------------------------------------------------------------------- [unk-env1-a]_EU563329 [unk-env1-a] G_see_1D_env_samples_EU563329 gi|171770668|gb|EU563329| Uncultured microorganism clone G see 1D putative proteorhodopsin gene, partial cds Uncultured microorganism clone G see 1D putative proteorhodopsin gene, partial cds EU563329 [[root proteorhodopsin/env cluster 1/A subcluster]] root proteorhodopsin env cluster 1 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 01-juil-06 Grosser_Ploner_See_at_1m_depth other freshwater 54.15 10.42 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na TGCGCGCAGTTTAAAAGCTATATTGATTGGCTGCTGACCGTGCCGCTGATGTGCGTGGAATTTTATCTGATTACCAAAAAAGCGGGCGCGAAAAGCGGCCTGCTGTGGAAACTGATTTTTGCGAGCGTGGTGATGCTGGTGACCGGCTATTTTGGCGAAGCGGTGTGGCGCGAAAGCAGCGTGCTGTGGGGCGTGCTGAGCGGCGCGGCGTATTTTTATATTGCGTATCTGGTGTGGTTTGGCGAAGTGGCGGTGCTGGCGAACAACGCGGGCCCGGCGGTGGCGAAAGCGACCAAAACCCTGGCGTGGTTTGTGCTGGTGGGCTGGGCGATTTATCCGAGCCTGCGCGCG CAQFKSYIDWLLTVPLMCVEFYLITKKAGAKSGLLWKLIFASVVMLVTGYFGEAVWRESSVLWGVLSGAAYFYIAYLVWFGEVAVLANNAGPAVAKATKTLAWFVLVGWAIYPSLRA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCGCGCAGTTTAAAAGCTATATTGATTGG------------------------CTGCTGACCGTGCCGCTGATGTGCGTGGAATTTTATCTGATTACCAAAAAA---------GCG------GGCGCGAAAAGC---GGCCTG------------------------------------CTGTGGAAA---CTGATTTTTGCGAGCGTGGTGATGCTGGTGACCGGCTATTTTGGCGAA---------GCG------------------GTG------TGGCGC------------------------------------------------------------------------------------------------GAAAGCAGC------------------GTGCTGTGG---GGCGTGCTGAGCGGCGCGGCGTATTTTTATATTGCGTATCTGGTG---------------TGG------TTT---GGCGAAGTGGCGGTGCTGGCGAACAAC------GCG---GGCCCGGCG---GTG---GCG---AAA---GCG---ACC---AAA---ACCCTG---GCGTGGTTTGTGCTGGTG---------------------------------------------------------------GGCTGG---------GCGATTTATCCGAGCCTGCGCGCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAQFKSYIDW--------LLTVPLMCVEFYLITKK---A--GAKS-GL------------LWK-LIFASVVMLVTGYFGE---A------V--WR--------------------------------ESS------VLW-GVLSGAAYFYIAYLV-----W--F-GEVAVLANN--A-GPA-V-A-K-A-T-K-TL-AWFVLV---------------------GW---AIYPSLRA---------------------------------------------------------------------------------------------- [unk-env1-a]_EU563318 [unk-env1-a] Kin_12m_May07D_env_samples_EU563318 gi|171770646|gb|EU563318| Uncultured microorganism clone Kin 12m May07D putative proteorhodopsin gene, partial cds Uncultured microorganism clone Kin 12m May07D putative proteorhodopsin gene, partial cds EU563318 [[root proteorhodopsin/env cluster 1/A subcluster]] root proteorhodopsin env cluster 1 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 May2007 Lake_Kinneret_at_12m_depth other freshwater 32.08 35.07 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na TGCGCGCAGTTTATGCGCTATATTGATTGGATTCTGACCGTGCCGCTGATGTGCGTGGAATTTTATCTGATTACCAAAAAAGCGGGCGCGAAAGTGAGCCTGCTGTGGAAACTGATTTTTGCGAGCCTGGTGATGCTGGTGACCGGCTATTTTGGCGAAACCATTGATCGCGGCAACAGCGTGCTGTGGGGCGTGATTAGCGGCGCGGCGTATTTTTATATTGCGTATCTGATTTGGTTTGGCGAAGTGGCGGCGCTGAGCCAGACCGCGGGCCCGCAGGTGGCGAAAGCGACCCGCGTGCTGGCGTGGTTTGTGCTGGTGGGCTGGACCATTTATCCGAGCCTGCGCGCG CAQFMRYIDWILTVPLMCVEFYLITKKAGAKVSLLWKLIFASLVMLVTGYFGETIDRGNSVLWGVISGAAYFYIAYLIWFGEVAALSQTAGPQVAKATRVLAWFVLVGWTIYPSLRA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCGCGCAGTTTATGCGCTATATTGATTGG------------------------ATTCTGACCGTGCCGCTGATGTGCGTGGAATTTTATCTGATTACCAAAAAA---------GCG------GGCGCGAAAGTG---AGCCTG------------------------------------CTGTGGAAA---CTGATTTTTGCGAGCCTGGTGATGCTGGTGACCGGCTATTTTGGCGAA---------ACC------------------ATT------GATCGC------------------------------------------------------------------------------------------------GGCAACAGC------------------GTGCTGTGG---GGCGTGATTAGCGGCGCGGCGTATTTTTATATTGCGTATCTGATT---------------TGG------TTT---GGCGAAGTGGCGGCGCTGAGCCAGACC------GCG---GGCCCGCAG---GTG---GCG---AAA---GCG---ACC---CGC---GTGCTG---GCGTGGTTTGTGCTGGTG---------------------------------------------------------------GGCTGG---------ACCATTTATCCGAGCCTGCGCGCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAQFMRYIDW--------ILTVPLMCVEFYLITKK---A--GAKV-SL------------LWK-LIFASLVMLVTGYFGE---T------I--DR--------------------------------GNS------VLW-GVISGAAYFYIAYLI-----W--F-GEVAALSQT--A-GPQ-V-A-K-A-T-R-VL-AWFVLV---------------------GW---TIYPSLRA---------------------------------------------------------------------------------------------- [unk-env1-a]_EU563331 [unk-env1-a] G_see_4C_env_samples_EU563331 gi|171770672|gb|EU563331| Uncultured microorganism clone G see 4C putative proteorhodopsin gene, partial cds Uncultured microorganism clone G see 4C putative proteorhodopsin gene, partial cds EU563331 [[root proteorhodopsin/env cluster 1/A subcluster]] root proteorhodopsin env cluster 1 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 01-juil-06 Grosser_Ploner_See_at_1m_depth other freshwater 54.15 10.42 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na TGCGCGCAGTTTCAGCGCTATGTGGATTGGATTCTGACCGTGCCGCTGATGTGCGTGGAATTTTATCTGATTACCAAAAAAGCGGGCGCGAAAACCGCGCTGCTGTGGAAACTGATTTTTGCGAGCCTGGTGATGCTGATTACCGGCTATGTGGGCGAAGTGCTGGATCCGGCGCAGAGCGTGCTGTGGGGCGTGCTGAGCGGCGCGGCGTATTTTTATATTGCGTATCTGGTGTGGTTTGGCGAAGTGGCGAAACTGGCGCAGAGCGCGGGCCCGCAGGTGGCGAAAGCGACCAAAATTCTGGCGTGGTTTGTGCTGGTGGGCTGGAGCATTTATCCGAGCCTGCGCGCG CAQFQRYVDWILTVPLMCVEFYLITKKAGAKTALLWKLIFASLVMLITGYVGEVLDPAQSVLWGVLSGAAYFYIAYLVWFGEVAKLAQSAGPQVAKATKILAWFVLVGWSIYPSLRA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCGCGCAGTTTCAGCGCTATGTGGATTGG------------------------ATTCTGACCGTGCCGCTGATGTGCGTGGAATTTTATCTGATTACCAAAAAA---------GCG------GGCGCGAAAACC---GCGCTG------------------------------------CTGTGGAAA---CTGATTTTTGCGAGCCTGGTGATGCTGATTACCGGCTATGTGGGCGAA---------GTG------------------CTG------GATCCG------------------------------------------------------------------------------------------------GCGCAGAGC------------------GTGCTGTGG---GGCGTGCTGAGCGGCGCGGCGTATTTTTATATTGCGTATCTGGTG---------------TGG------TTT---GGCGAAGTGGCGAAACTGGCGCAGAGC------GCG---GGCCCGCAG---GTG---GCG---AAA---GCG---ACC---AAA---ATTCTG---GCGTGGTTTGTGCTGGTG---------------------------------------------------------------GGCTGG---------AGCATTTATCCGAGCCTGCGCGCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAQFQRYVDW--------ILTVPLMCVEFYLITKK---A--GAKT-AL------------LWK-LIFASLVMLITGYVGE---V------L--DP--------------------------------AQS------VLW-GVLSGAAYFYIAYLV-----W--F-GEVAKLAQS--A-GPQ-V-A-K-A-T-K-IL-AWFVLV---------------------GW---SIYPSLRA---------------------------------------------------------------------------------------------- [unk-env1-a]_EU563326 [unk-env1-a] kin_12m_July07A_env_samples_EU563326 gi|171770662|gb|EU563326| Uncultured microorganism clone kin 12m July07A putative proteorhodopsin gene, partial cds Uncultured microorganism clone kin 12m July07A putative proteorhodopsin gene, partial cds EU563326 [[root proteorhodopsin/env cluster 1/A subcluster]] root proteorhodopsin env cluster 1 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 01-juil-07 Lake_Kinneret_at_12m_depth other freshwater 32.08 35.07 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na ATTCGCTATGTGGATTGGCTGCTGACCGTGCCGCTGATGTGCGTGGAATTTTATCTGATTACCAAAAAAAGCGGCGGCACCACCGGCCTGCTGTGGAAAATGATTCTGGCGAGCGTGGTGATGCTGGTGACCGGCTATTGGGGCGAAGCGGGCCTGGGCAACGCGACCATTTGGAACACCATTAGCGCGATTGCGTATTTTTATATTGTGTATGAAGTGTGGATGGGCGATGTGAAAAAACTGGCGACCAGCGCGGGCAGCGCGGTGGCGGATGCGAACAGCGCGCTGGGCTGGAGCATTTATCCG IRYVDWLLTVPLMCVEFYLITKKSGGTTGLLWKMILASVVMLVTGYWGEAGLGNATIWNTISAIAYFYIVYEVWMGDVKKLATSAGSAVADANSALGWSIYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCGCTATGTGGATTGG------------------------CTGCTGACCGTGCCGCTGATGTGCGTGGAATTTTATCTGATTACCAAAAAA---------AGC------GGCGGCACCACC---GGCCTG------------------------------------CTGTGGAAA---ATGATTCTGGCGAGCGTGGTGATGCTGGTGACCGGCTATTGGGGCGAA---------GCG------------------GGC------CTGGGC---------------------------------------------------------------------------------------------------AACGCG------------------ACCATTTGG---AACACCATTAGCGCGATTGCGTATTTTTATATTGTGTATGAAGTG---------------TGG------ATG---GGCGATGTGAAAAAACTGGCGACCAGC------GCG---GGCAGCGCG---GTG---GCG---GAT---GCG---AAC---AGC---GCGCTG------------------------------------------------------------------------------------GGCTGG---------AGCATTTATCCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IRYVDW--------LLTVPLMCVEFYLITKK---S--GGTT-GL------------LWK-MILASVVMLVTGYWGE---A------G--LG---------------------------------NA------TIW-NTISAIAYFYIVYEV-----W--M-GDVKKLATS--A-GSA-V-A-D-A-N-S-AL----------------------------GW---SIYP-------------------------------------------------------------------------------------------------- [unk-env1-a]_EU563325 [unk-env1-a] kin_6m_Jan07H_env_samples_EU563325 gi|171770660|gb|EU563325| Uncultured microorganism clone kin 6m Jan07H putative proteorhodopsin gene, partial cds Uncultured microorganism clone kin 6m Jan07H putative proteorhodopsin gene, partial cds EU563325 [[root proteorhodopsin/env cluster 1/A subcluster]] root proteorhodopsin env cluster 1 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 01-janv-07 Lake_Kinneret_at_6m_depth other freshwater 32.08 35.07 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na CGCTATATTGATTGGCTGCTGACCGTGCCGCTGATGTGCGTGGAATTTTATCTGATTACCAAAAAAAGCGGCGGCACCACCGGCCTGCTGTGGAAAATGATTCTGGCGAGCGTGGTGATGCTGGTGACCGGCTATTGGGGCGAAGCGGGCCTGGGCAACGCGACCATTTGGGGCACCATTAGCGCGATTGCGTATTTTTATATTGTGTATGAAGTGTGGATGGGCGATGTGAAAAAACTGGCGACCAGCGCGGGCAGCGCGGTGGCGGATGCGAACAGCGCGCTGGGCTGGTTTGTGCTGGTGGGCTGGACCATTTATCCG RYIDWLLTVPLMCVEFYLITKKSGGTTGLLWKMILASVVMLVTGYWGEAGLGNATIWGTISAIAYFYIVYEVWMGDVKKLATSAGSAVADANSALGWFVLVGWTIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTATATTGATTGG------------------------CTGCTGACCGTGCCGCTGATGTGCGTGGAATTTTATCTGATTACCAAAAAA---------AGC------GGCGGCACCACC---GGCCTG------------------------------------CTGTGGAAA---ATGATTCTGGCGAGCGTGGTGATGCTGGTGACCGGCTATTGGGGCGAA---------GCG------------------GGC------CTGGGC---------------------------------------------------------------------------------------------------AACGCG------------------ACCATTTGG---GGCACCATTAGCGCGATTGCGTATTTTTATATTGTGTATGAAGTG---------------TGG------ATG---GGCGATGTGAAAAAACTGGCGACCAGC------GCG---GGCAGCGCG---GTG---GCG---GAT---GCG---AAC---AGC---GCGCTG---GGCTGGTTTGTGCTGGTG---------------------------------------------------------------GGCTGG---------ACCATTTATCCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLMCVEFYLITKK---S--GGTT-GL------------LWK-MILASVVMLVTGYWGE---A------G--LG---------------------------------NA------TIW-GTISAIAYFYIVYEV-----W--M-GDVKKLATS--A-GSA-V-A-D-A-N-S-AL-GWFVLV---------------------GW---TIYP-------------------------------------------------------------------------------------------------- [unk-env1-a]_EU563332 [unk-env1-a] G_see_2D_env_samples_EU563332 gi|171770674|gb|EU563332| Uncultured microorganism clone G see 2D putative proteorhodopsin gene, partial cds Uncultured microorganism clone G see 2D putative proteorhodopsin gene, partial cds EU563332 [[root proteorhodopsin/env cluster 1/A subcluster]] root proteorhodopsin env cluster 1 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 01-juil-06 Grosser_Ploner_See_at_1m_depth other freshwater 54.15 10.42 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na TGCGCGCAGTTTCATCGCTATGTGGATTGGGTGCTGACCGTGCCGCTGATGTGCGTGGAATTTTATCTGATTCTGAAAGTGGCGGGCGCGAAAACCGATCTGCTGTGGAAAATGATTTTTCTGAGCGTGGTGATGCTGGTGACCGGCTATCTGGGCGAAACCGTGTATAGCGATCAGGCGGCGCTGTGGGGCGGCATTAGCGGCCTGGCGTATTTTGTGATTGCGTATGAAATTTGGCTGGGCAGCGCGAGCAAACTGGCGGCGGCGGCGGGCGGCAACGTGCTGGCGGCGCATAAAATTCTGTGCTGGTTTGTGCTGGTGGGCTGGGTGATTTATCCGAGCCTGCGCGCG CAQFHRYVDWVLTVPLMCVEFYLILKVAGAKTDLLWKMIFLSVVMLVTGYLGETVYSDQAALWGGISGLAYFVIAYEIWLGSASKLAAAAGGNVLAAHKILCWFVLVGWVIYPSLRA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCGCGCAGTTTCATCGCTATGTGGATTGG------------------------GTGCTGACCGTGCCGCTGATGTGCGTGGAATTTTATCTGATTCTGAAAGTG---------GCG------GGCGCGAAAACC---GATCTG------------------------------------CTGTGGAAA---ATGATTTTTCTGAGCGTGGTGATGCTGGTGACCGGCTATCTGGGCGAA---------ACC------------------GTG------TATAGC------------------------------------------------------------------------------------------------GATCAGGCG------------------GCGCTGTGG---GGCGGCATTAGCGGCCTGGCGTATTTTGTGATTGCGTATGAAATT---------------TGG------CTG---GGCAGCGCGAGCAAACTGGCGGCGGCG------GCG---GGCGGCAAC---GTG---CTG---GCG---GCG---CAT---AAA---ATTCTG---TGCTGGTTTGTGCTGGTG---------------------------------------------------------------GGCTGG---------GTGATTTATCCGAGCCTGCGCGCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAQFHRYVDW--------VLTVPLMCVEFYLILKV---A--GAKT-DL------------LWK-MIFLSVVMLVTGYLGE---T------V--YS--------------------------------DQA------ALW-GGISGLAYFVIAYEI-----W--L-GSASKLAAA--A-GGN-V-L-A-A-H-K-IL-CWFVLV---------------------GW---VIYPSLRA---------------------------------------------------------------------------------------------- [unk-env1-a]_EU563317 [unk-env1-a] Kin_12m_May07A_env_samples_EU563317 gi|171770644|gb|EU563317| Uncultured microorganism clone Kin 12m May07A putative proteorhodopsin gene, partial cds Uncultured microorganism clone Kin 12m May07A putative proteorhodopsin gene, partial cds EU563317 [[root proteorhodopsin/env cluster 1/A subcluster]] root proteorhodopsin env cluster 1 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 May2007 Lake_Kinneret_at_12m_depth other freshwater 32.08 35.07 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na TGCGCGCAGTTTCTGCGCTATATTGATTGGACCCTGACCGTGCCGCTGATGTGCATTGAATATTTTCTGATTCTGAAACCGGCGGGCGCGAAAACCGGCATGCTGACCCGCCTGCTGTTTGGCAGCATTGTGATGCTGGTGGCGGGCTATATTGGCGAAGCGGTGGCGCCGGAACAGAACGTGATGTGGGGCATTATTAGCACCCTGGGCTGGGCGCTGATTATTTATGAAATTTATATGGGCGAAGCGAGCAAACTGGCGGCGGCGAGCAGCAACGCGGAAGTGCAGAGCGGCTTTAAAGTGATGCGCTGGTTTACCCTGGTGGGCTGGGCGATTTATCCGAGCCTGCGC CAQFLRYIDWTLTVPLMCIEYFLILKPAGAKTGMLTRLLFGSIVMLVAGYIGEAVAPEQNVMWGIISTLGWALIIYEIYMGEASKLAAASSNAEVQSGFKVMRWFTLVGWAIYPSLR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCGCGCAGTTTCTGCGCTATATTGATTGG------------------------ACCCTGACCGTGCCGCTGATGTGCATTGAATATTTTCTGATTCTGAAACCG---------GCG------GGCGCGAAAACC---GGCATG------------------------------------CTGACCCGC---CTGCTGTTTGGCAGCATTGTGATGCTGGTGGCGGGCTATATTGGCGAA---------GCG------------------GTG------GCGCCG------------------------------------------------------------------------------------------------GAACAGAAC------------------GTGATGTGG---GGCATTATTAGCACCCTGGGCTGGGCGCTGATTATTTATGAAATT---------------TAT------ATG---GGCGAAGCGAGCAAACTGGCGGCGGCG------AGC---AGCAACGCGGAAGTG---CAG---AGC---GGC---TTT---AAA---GTGATG---CGCTGGTTTACCCTGGTG---------------------------------------------------------------GGCTGG---------GCGATTTATCCGAGCCTGCGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAQFLRYIDW--------TLTVPLMCIEYFLILKP---A--GAKT-GM------------LTR-LLFGSIVMLVAGYIGE---A------V--AP--------------------------------EQN------VMW-GIISTLGWALIIYEI-----Y--M-GEASKLAAA--S-SNAEV-Q-S-G-F-K-VM-RWFTLV---------------------GW---AIYPSLR----------------------------------------------------------------------------------------------- [unk-env1-a]_EU563319 [unk-env1-a] Kin_12m_May07E_env_samples_EU563319 gi|171770648|gb|EU563319| Uncultured microorganism clone Kin 12m May07E putative proteorhodopsin gene, partial cds Uncultured microorganism clone Kin 12m May07E putative proteorhodopsin gene, partial cds EU563319 [[root proteorhodopsin/env cluster 1/A subcluster]] root proteorhodopsin env cluster 1 A subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 May2007 Lake_Kinneret_at_12m_depth other freshwater 32.08 35.07 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na CGCTATATTGATTGGATTCTGACCGTGCCGCTGATGTGCGTGGAATTTTATCTGATTCTGAAAGCGTTTGGCGCGAAAATTGATCTGCTGTGGAAAATGATTGGCTATAGCCTGATTATGCTGGTGGCGGGCTATCTGGGCGAAACCGCGTTTCGCAACCAGAGCGTGATTTGGGGCATTATTAGCACCCTGGGCTATGCGGGCATTCTGTATGAAGTGTGGCTGGGCAGCGCGCGCAAACTGGCGAGCGGCAGCAACGATCCGGCGCTGCAGAGCGCGTTTAAAGCGCTGAGCTGGCTGGTGCTGGTGGCGGGCCCGTTTACCCAGGCGTGCGCG RYIDWILTVPLMCVEFYLILKAFGAKIDLLWKMIGYSLIMLVAGYLGETAFRNQSVIWGIISTLGYAGILYEVWLGSARKLASGSNDPALQSAFKALSWLVLVAGPFTQACA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTATATTGATTGG------------------------ATTCTGACCGTGCCGCTGATGTGCGTGGAATTTTATCTGATTCTGAAAGCG---------TTT------GGCGCGAAAATT---GATCTG------------------------------------CTGTGGAAA---ATGATTGGCTATAGCCTGATTATGCTGGTGGCGGGCTATCTGGGCGAA---------ACC------------------GCG------TTTCGC------------------------------------------------------------------------------------------------AACCAGAGC------------------GTGATTTGG---GGCATTATTAGCACCCTGGGCTATGCGGGCATTCTGTATGAAGTG---------------TGG------CTG---GGCAGCGCGCGCAAACTGGCGAGCGGC------AGC---AACGATCCGGCGCTG---CAG---AGC---GCG---TTT---AAA---GCGCTG---AGCTGGCTGGTGCTGGTG---------------------------------------------------------------GCGGGC---------CCGTTTACCCAGGCGTGCGCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------ILTVPLMCVEFYLILKA---F--GAKI-DL------------LWK-MIGYSLIMLVAGYLGE---T------A--FR--------------------------------NQS------VIW-GIISTLGYAGILYEV-----W--L-GSARKLASG--S-NDPAL-Q-S-A-F-K-AL-SWLVLV---------------------AG---PFTQACA----------------------------------------------------------------------------------------------- [unk-env1-Verrumicrobia]_FJ545198 [unk-env1-Verrumicrobia] clone_Erie_ST84_PR_E1_rhodopsin_gene_partial_cds_FJ545198 gi|224384071|gb|FJ545198| Uncultured microorganism clone Erie.ST84.PR.E1 putative rhodopsin gene, partial cds. Uncultured microorganism clone Erie.ST84.PR.E1 putative rhodopsin gene, partial cds. FJ545198 [[root proteorhodopsin/env cluster 1/unclassified Verrumicrobia subcluster]] root proteorhodopsin env cluster 1 unclassified Verrumicrobia subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juil-05 Lake Erie other freshwater 41.9461 -81.6461 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTTACCGTGCCTCTTATGTGCGTGGAGTTCTACTTACTTCTCAAATCCGCCGGTGCCAGCGTGAATATGCTCTGGCGCCTCATCGGCTACTCAGTGCTCATGCTCGTAGCCGGTTATGTCGGCGAAGTATCGGCCAAACTCGGACAACCCGTGCGTGGCTTTGAGAACTTCGGCTGGGGCGTTATCTCCACTATCGGTTGGGCGGGGATCGTCTATGAGATCTTCTTTGGGGAAGCCAAACAACTTGCCGATGGAAGCAGCGATGCTGGTGTTCGCAAGGCGTTTAATCTCCTTCGCGGTTTCGTTCTCATC LTVPLMCVEFYLLLKSAGASVNMLWRLIGYSVLMLVAGYVGEVSAKLGQPVRGFENFGWGVISTIGWAGIVYEIFFGEAKQLADGSSDAGVRKAFNLLRGFVLI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTACCGTGCCTCTTATGTGCGTGGAGTTCTACTTACTTCTCAAATCC---------GCC------GGTGCCAGCGTG---AATATG------------------------------------CTCTGGCGC---CTCATCGGCTACTCAGTGCTCATGCTCGTAGCCGGTTATGTCGGCGAA---------GTA------------------TCG------GCCAAA---------------------------------CTC---GGACAACCC---GTGCGT---------GGC---------------------------TTTGAGAAC------------------TTCGGCTGG---GGCGTTATCTCCACTATCGGTTGGGCGGGGATCGTCTATGAGATC---------------TTC------TTT---GGGGAAGCCAAACAACTTGCCGATGGA------AGC---AGCGATGCTGGTGTT---CGC---AAG---GCG---TTT---AAT---CTCCTT---CGCGGTTTCGTTCTCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTVPLMCVEFYLLLKS---A--GASV-NM------------LWR-LIGYSVLMLVAGYVGE---V------S--AK-----------L-GQP-VR---G---------FEN------FGW-GVISTIGWAGIVYEI-----F--F-GEAKQLADG--S-SDAGV-R-K-A-F-N-LL-RGFVLI-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-Verrumicrobia]_FJ545200 [unk-env1-Verrumicrobia] clone_Erie_ST84_PR_G1_rhodopsin_gene_partial_cds_FJ545200 gi|224384075|gb|FJ545200| Uncultured microorganism clone Erie.ST84.PR.G1 putative rhodopsin gene, partial cds. Uncultured microorganism clone Erie.ST84.PR.G1 putative rhodopsin gene, partial cds. FJ545200 [[root proteorhodopsin/env cluster 1/unclassified Verrumicrobia subcluster]] root proteorhodopsin env cluster 1 unclassified Verrumicrobia subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juil-05 Lake Erie other freshwater 41.9461 -81.6461 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTTACCGTGCCTCTTATGTGCGTGGAGTTCTACTTACTTCTCAAATCCGCCGGTGCCAGCGTGAATATGCTCTGGCGCCTCATCGGCTACTCAGTGCTCATGCTCGTAGCCGGTTATGTCGGCGAAGTATCGGCCAAACTCGGACAACCCGTGCGTGGCTTTGAGAACTTCGGCTGGGGCGTTATCTCCACTATCGGTTGGGCGGGGATCGTCTATGAGATCTTCTTTGGGGAAGCCAAACAACTTGCCGATGGAAGCAGCGATGCTGGTGTTCGCAAGGCGTTTAATCTCCTTCGCGGTTTCGTTCTCATC LTVPLMCVEFYLLLKSAGASVNMLWRLIGYSVLMLVAGYVGEVSAKLGQPVRGFENFGWGVISTIGWAGIVYEIFFGEAKQLADGSSDAGVRKAFNLLRGFVLI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTACCGTGCCTCTTATGTGCGTGGAGTTCTACTTACTTCTCAAATCC---------GCC------GGTGCCAGCGTG---AATATG------------------------------------CTCTGGCGC---CTCATCGGCTACTCAGTGCTCATGCTCGTAGCCGGTTATGTCGGCGAA---------GTA------------------TCG------GCCAAA---------------------------------CTC---GGACAACCC---GTGCGT---------GGC---------------------------TTTGAGAAC------------------TTCGGCTGG---GGCGTTATCTCCACTATCGGTTGGGCGGGGATCGTCTATGAGATC---------------TTC------TTT---GGGGAAGCCAAACAACTTGCCGATGGA------AGC---AGCGATGCTGGTGTT---CGC---AAG---GCG---TTT---AAT---CTCCTT---CGCGGTTTCGTTCTCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTVPLMCVEFYLLLKS---A--GASV-NM------------LWR-LIGYSVLMLVAGYVGE---V------S--AK-----------L-GQP-VR---G---------FEN------FGW-GVISTIGWAGIVYEI-----F--F-GEAKQLADG--S-SDAGV-R-K-A-F-N-LL-RGFVLI-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-Verrumicrobia]_FJ545201 [unk-env1-Verrumicrobia] clone_Erie_ST84_PR_A2_rhodopsin_gene_partial_cds_FJ545201 gi|224384077|gb|FJ545201| Uncultured microorganism clone Erie.ST84.PR.A2 putative rhodopsin gene, partial cds. Uncultured microorganism clone Erie.ST84.PR.A2 putative rhodopsin gene, partial cds. FJ545201 [[root proteorhodopsin/env cluster 1/unclassified Verrumicrobia subcluster]] root proteorhodopsin env cluster 1 unclassified Verrumicrobia subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juil-05 Lake Erie other freshwater 41.9461 -81.6461 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTCACCGTGCCTCTTATGTGCGTGGAGTTCTACTTACTTCTCAAATCCGCCGGTGCCAGCGTGAATATGCTCTGGCGCCTCATCGGCTACTCGGTGCTCATGCTCGTAGCCGGTTATGTCGGCGAAGTATCGGCCAAACTCGGACAACCCGTGCGTGGCTTTGAGAACTTCGGCTGGGGCGTTATCTCCACCATCGGTTGGGCGGGGATCGTCTATGAGATCTTCTTTGGGGAAGCCAAACAACTTGCCGACGGAAGCAGCGATGCTGGCGTTCGCAAAGCGTTCAATCTCCTTCGCGGTTTCGTTCTCATC LTVPLMCVEFYLLLKSAGASVNMLWRLIGYSVLMLVAGYVGEVSAKLGQPVRGFENFGWGVISTIGWAGIVYEIFFGEAKQLADGSSDAGVRKAFNLLRGFVLI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCACCGTGCCTCTTATGTGCGTGGAGTTCTACTTACTTCTCAAATCC---------GCC------GGTGCCAGCGTG---AATATG------------------------------------CTCTGGCGC---CTCATCGGCTACTCGGTGCTCATGCTCGTAGCCGGTTATGTCGGCGAA---------GTA------------------TCG------GCCAAA---------------------------------CTC---GGACAACCC---GTGCGT---------GGC---------------------------TTTGAGAAC------------------TTCGGCTGG---GGCGTTATCTCCACCATCGGTTGGGCGGGGATCGTCTATGAGATC---------------TTC------TTT---GGGGAAGCCAAACAACTTGCCGACGGA------AGC---AGCGATGCTGGCGTT---CGC---AAA---GCG---TTC---AAT---CTCCTT---CGCGGTTTCGTTCTCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTVPLMCVEFYLLLKS---A--GASV-NM------------LWR-LIGYSVLMLVAGYVGE---V------S--AK-----------L-GQP-VR---G---------FEN------FGW-GVISTIGWAGIVYEI-----F--F-GEAKQLADG--S-SDAGV-R-K-A-F-N-LL-RGFVLI-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-Verrumicrobia]_FJ545197 [unk-env1-Verrumicrobia] clone_Erie_ST84_PR_D1_rhodopsin_gene_partial_cds_FJ545197 gi|224384069|gb|FJ545197| Uncultured microorganism clone Erie.ST84.PR.D1 putative rhodopsin gene, partial cds. Uncultured microorganism clone Erie.ST84.PR.D1 putative rhodopsin gene, partial cds. FJ545197 [[root proteorhodopsin/env cluster 1/unclassified Verrumicrobia subcluster]] root proteorhodopsin env cluster 1 unclassified Verrumicrobia subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juil-05 Lake Erie other freshwater 41.9461 -81.6461 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTCACCGTGCCTCTTATGTGCGTGGAGTTCTACTTACTTCTCAAATCCGCCGGTGCCAGCGTGAATATGCTCTGGCGCCTCATCGGCTACTCGGTGCTCATGCTCGTAGCCGGTTATGTCGGCGAAGTATCGGCCAAACTCGGACAACCCGTGCGTGGCTTTGAGAACTTCGGCTGGGGCGTTATCTCCACCATCGGTTGGGCGGGGATCGTCTATGAGATCTTCTTTGGGGAAGCCAAACAACTTGCCGACGGAAGCAGCGATGCTGGCGTTCGCAAGGCGTTCAATCTCCTTCGCGGTTTCGTTCTCATC LTVPLMCVEFYLLLKSAGASVNMLWRLIGYSVLMLVAGYVGEVSAKLGQPVRGFENFGWGVISTIGWAGIVYEIFFGEAKQLADGSSDAGVRKAFNLLRGFVLI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCACCGTGCCTCTTATGTGCGTGGAGTTCTACTTACTTCTCAAATCC---------GCC------GGTGCCAGCGTG---AATATG------------------------------------CTCTGGCGC---CTCATCGGCTACTCGGTGCTCATGCTCGTAGCCGGTTATGTCGGCGAA---------GTA------------------TCG------GCCAAA---------------------------------CTC---GGACAACCC---GTGCGT---------GGC---------------------------TTTGAGAAC------------------TTCGGCTGG---GGCGTTATCTCCACCATCGGTTGGGCGGGGATCGTCTATGAGATC---------------TTC------TTT---GGGGAAGCCAAACAACTTGCCGACGGA------AGC---AGCGATGCTGGCGTT---CGC---AAG---GCG---TTC---AAT---CTCCTT---CGCGGTTTCGTTCTCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTVPLMCVEFYLLLKS---A--GASV-NM------------LWR-LIGYSVLMLVAGYVGE---V------S--AK-----------L-GQP-VR---G---------FEN------FGW-GVISTIGWAGIVYEI-----F--F-GEAKQLADG--S-SDAGV-R-K-A-F-N-LL-RGFVLI-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-Verrumicrobia]_FJ545206 [unk-env1-Verrumicrobia] clone_Erie_ST84_PR_F2_rhodopsin_gene_partial_cds_FJ545206 gi|224384087|gb|FJ545206| Uncultured microorganism clone Erie.ST84.PR.F2 putative rhodopsin gene, partial cds. Uncultured microorganism clone Erie.ST84.PR.F2 putative rhodopsin gene, partial cds. FJ545206 [[root proteorhodopsin/env cluster 1/unclassified Verrumicrobia subcluster]] root proteorhodopsin env cluster 1 unclassified Verrumicrobia subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juil-05 Lake Erie other freshwater 41.9461 -81.6461 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTCACCGTGCCTCTTATGTGCGTGGAGTTCTACTTACTTCTTAAATCCGCCGGTGCCAGCGTGAATATGCTCTGGCGCCTCATCGGCTATTCGGTGCTCATGCTCGTAGCCGGTTATGTCGGCGAAGTATCGGCCAAACTCGGACAACCCGTGCGTGGCTTTGAGAACTTCGGCTGGGGCGTTATCTCCACCATCGGTTGGGCGGGGATCGTCTATGAGATCTTCTTTGGGGAAGCCAAACAACTTGCCGACGGAAGCAGCGATGCTGGCGTTCGCAAGGCGTTCAATCTCCTTCGCGGTTTCGTTCTCATC LTVPLMCVEFYLLLKSAGASVNMLWRLIGYSVLMLVAGYVGEVSAKLGQPVRGFENFGWGVISTIGWAGIVYEIFFGEAKQLADGSSDAGVRKAFNLLRGFVLI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCACCGTGCCTCTTATGTGCGTGGAGTTCTACTTACTTCTTAAATCC---------GCC------GGTGCCAGCGTG---AATATG------------------------------------CTCTGGCGC---CTCATCGGCTATTCGGTGCTCATGCTCGTAGCCGGTTATGTCGGCGAA---------GTA------------------TCG------GCCAAA---------------------------------CTC---GGACAACCC---GTGCGT---------GGC---------------------------TTTGAGAAC------------------TTCGGCTGG---GGCGTTATCTCCACCATCGGTTGGGCGGGGATCGTCTATGAGATC---------------TTC------TTT---GGGGAAGCCAAACAACTTGCCGACGGA------AGC---AGCGATGCTGGCGTT---CGC---AAG---GCG---TTC---AAT---CTCCTT---CGCGGTTTCGTTCTCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTVPLMCVEFYLLLKS---A--GASV-NM------------LWR-LIGYSVLMLVAGYVGE---V------S--AK-----------L-GQP-VR---G---------FEN------FGW-GVISTIGWAGIVYEI-----F--F-GEAKQLADG--S-SDAGV-R-K-A-F-N-LL-RGFVLI-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-Verrumicrobia]_FJ545205 [unk-env1-Verrumicrobia] clone_Erie_ST84_PR_E2_rhodopsin_gene_partial_cds_FJ545205 gi|224384085|gb|FJ545205| Uncultured microorganism clone Erie.ST84.PR.E2 putative rhodopsin gene, partial cds. Uncultured microorganism clone Erie.ST84.PR.E2 putative rhodopsin gene, partial cds. FJ545205 [[root proteorhodopsin/env cluster 1/unclassified Verrumicrobia subcluster]] root proteorhodopsin env cluster 1 unclassified Verrumicrobia subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juil-05 Lake Erie other freshwater 41.9461 -81.6461 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTCACCGTGCCTCTTATGTGCGTGGAGTTCTACTTACTTCTCAAATCCGCCGGTGCCAGCGTGAATATGCCCTGGCGCCTCATCGGCTATTCGGTGCTCATGCTCGTAGCCGGTTATGTCGGCGAAGTATCGGCCAAACTCGGACAACCCGTGCGTGGCTTTGAGAACTTCGGCTGGGGCGTTATCTCCACCATCGGTTGGGCGGGGATCGTCTATGAGATCTTCTTTGGGGAAGCCAAACAACTTGCCGACGGAAGCAGCGATGCTGGCGTTCGCAAGGCGTTCAATCTCCTTCGCGGTTTCGTTCTCATC LTVPLMCVEFYLLLKSAGASVNMPWRLIGYSVLMLVAGYVGEVSAKLGQPVRGFENFGWGVISTIGWAGIVYEIFFGEAKQLADGSSDAGVRKAFNLLRGFVLI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCACCGTGCCTCTTATGTGCGTGGAGTTCTACTTACTTCTCAAATCC---------GCC------GGTGCCAGCGTG---AATATG------------------------------------CCCTGGCGC---CTCATCGGCTATTCGGTGCTCATGCTCGTAGCCGGTTATGTCGGCGAA---------GTA------------------TCG------GCCAAA---------------------------------CTC---GGACAACCC---GTGCGT---------GGC---------------------------TTTGAGAAC------------------TTCGGCTGG---GGCGTTATCTCCACCATCGGTTGGGCGGGGATCGTCTATGAGATC---------------TTC------TTT---GGGGAAGCCAAACAACTTGCCGACGGA------AGC---AGCGATGCTGGCGTT---CGC---AAG---GCG---TTC---AAT---CTCCTT---CGCGGTTTCGTTCTCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTVPLMCVEFYLLLKS---A--GASV-NM------------PWR-LIGYSVLMLVAGYVGE---V------S--AK-----------L-GQP-VR---G---------FEN------FGW-GVISTIGWAGIVYEI-----F--F-GEAKQLADG--S-SDAGV-R-K-A-F-N-LL-RGFVLI-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-Verrumicrobia]_EU563268 [unk-env1-Verrumicrobia] KIN11_env_samples_EU563268 gi|171770546|gb|EU563268| Uncultured microorganism clone KIN11 putative proteorhodopsin gene, partial cds Uncultured microorganism clone KIN11 putative proteorhodopsin gene, partial cds EU563268 [[root proteorhodopsin/env cluster 1/unclassified Verrumicrobia subcluster]] root proteorhodopsin env cluster 1 unclassified Verrumicrobia subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 2003 Lake_Kinneret other freshwater 32.08 35.07 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na AGGTACATCGATTGGCTCCTCACCGTGCCTCTTATGTGCGTGGAGTTCTACCTCCTTCTCAAAGCCGCTGGGGCCAGCATCAACATGCTCTGGCGCCTCATCGGTTATTCCGTCCTCATGTTGGTTGCCGGATACATCGGCGAAGTCTCTGCCAAGCTCGGTCAACCCGTGCGTGGCTTTGAGAACTTCGGCTGGGGTGTCATCTCCACCATCGGTTGGGCAGGAATCGTTTATGAGATCTTCTTCGGCGAAGCCAAACAACTTGCCGACGGCAGCAGCGATGCCAACGTCCGCAAGGCGTTCAACCTCCTCCGTGGTTTCGTTCTCATCGGTTGGGCCATATATCCA RYIDWLLTVPLMCVEFYLLLKAAGASINMLWRLIGYSVLMLVAGYIGEVSAKLGQPVRGFENFGWGVISTIGWAGIVYEIFFGEAKQLADGSSDANVRKAFNLLRGFVLIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATCGATTGG------------------------CTCCTCACCGTGCCTCTTATGTGCGTGGAGTTCTACCTCCTTCTCAAAGCC---------GCT------GGGGCCAGCATC---AACATG------------------------------------CTCTGGCGC---CTCATCGGTTATTCCGTCCTCATGTTGGTTGCCGGATACATCGGCGAA---------GTC------------------TCT------GCCAAG---------------------------------CTC---GGTCAACCC---GTGCGT---------GGC---------------------------TTTGAGAAC------------------TTCGGCTGG---GGTGTCATCTCCACCATCGGTTGGGCAGGAATCGTTTATGAGATC---------------TTC------TTC---GGCGAAGCCAAACAACTTGCCGACGGC------AGC---AGCGATGCCAACGTC---CGC---AAG---GCG---TTC---AAC---CTCCTC---CGTGGTTTCGTTCTCATC---------------------------------------------------------------GGTTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLMCVEFYLLLKA---A--GASI-NM------------LWR-LIGYSVLMLVAGYIGE---V------S--AK-----------L-GQP-VR---G---------FEN------FGW-GVISTIGWAGIVYEI-----F--F-GEAKQLADG--S-SDANV-R-K-A-F-N-LL-RGFVLI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env1-Verrumicrobia]_FJ545203 [unk-env1-Verrumicrobia] clone_Erie_ST84_PR_C2_rhodopsin_gene_partial_cds_FJ545203 gi|224384081|gb|FJ545203| Uncultured microorganism clone Erie.ST84.PR.C2 putative rhodopsin gene, partial cds. Uncultured microorganism clone Erie.ST84.PR.C2 putative rhodopsin gene, partial cds. FJ545203 [[root proteorhodopsin/env cluster 1/unclassified Verrumicrobia subcluster]] root proteorhodopsin env cluster 1 unclassified Verrumicrobia subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juil-05 Lake Erie other freshwater 41.9461 -81.6461 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTCACCGTGCCTCTTATGTGCGTGGAGTTTTACCTCCTTCTCAAAGCCGCTGGGGCCAGCATCAACATGCTCTGGCGCCTCATCGGTTATTCCGTCCTCATGTTGGTTGCCGGATACATCGGCGAAGTCTCCGCCAAGCTCGGTCAACCCGTGCGTGGCTTTGAGAACTTCGGCTGGGGTGTCATCTCCACCATCGGTTGGGCAGGAATCGTTTATGAGATCTTCTTCGGGGAAGCCAAACAACTTGCCGACGGCAGCAGCGATGCAAACGTCCGCAAGGCGTTCAACCTCCTCCGTGGCTTCGTTCTCATC LTVPLMCVEFYLLLKAAGASINMLWRLIGYSVLMLVAGYIGEVSAKLGQPVRGFENFGWGVISTIGWAGIVYEIFFGEAKQLADGSSDANVRKAFNLLRGFVLI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCACCGTGCCTCTTATGTGCGTGGAGTTTTACCTCCTTCTCAAAGCC---------GCT------GGGGCCAGCATC---AACATG------------------------------------CTCTGGCGC---CTCATCGGTTATTCCGTCCTCATGTTGGTTGCCGGATACATCGGCGAA---------GTC------------------TCC------GCCAAG---------------------------------CTC---GGTCAACCC---GTGCGT---------GGC---------------------------TTTGAGAAC------------------TTCGGCTGG---GGTGTCATCTCCACCATCGGTTGGGCAGGAATCGTTTATGAGATC---------------TTC------TTC---GGGGAAGCCAAACAACTTGCCGACGGC------AGC---AGCGATGCAAACGTC---CGC---AAG---GCG---TTC---AAC---CTCCTC---CGTGGCTTCGTTCTCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTVPLMCVEFYLLLKA---A--GASI-NM------------LWR-LIGYSVLMLVAGYIGE---V------S--AK-----------L-GQP-VR---G---------FEN------FGW-GVISTIGWAGIVYEI-----F--F-GEAKQLADG--S-SDANV-R-K-A-F-N-LL-RGFVLI-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-Verrumicrobia]_EU563274 [unk-env1-Verrumicrobia] KINp16_env_samples_EU563274 gi|171770558|gb|EU563274| Uncultured microorganism clone KINp16 putative proteorhodopsin gene, partial cds Uncultured microorganism clone KINp16 putative proteorhodopsin gene, partial cds EU563274 [[root proteorhodopsin/env cluster 1/unclassified Verrumicrobia subcluster]] root proteorhodopsin env cluster 1 unclassified Verrumicrobia subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 2003 Lake_Kinneret other freshwater 32.08 35.07 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na CGGTACATAGATTGGCTCCTCACCGTGCCTCTCATGTGCGTGGAGTTCTACCTCCTCCTCAAAACGGCGGGTGCCAGCGTGAATATGCTCTGGCGCCTCATCGGCTACTCGGTGCTGATGCTCGTCGCCGGTTACATCGGTGAAGTTTCCGCCAAAATGGGGCAACCCATCCGTGGCTTCGAAAACTTCGGCTGGGGTGTTATCTCCACCATCGGTTGGGCTGGAATCGTCTATGAAATCTTCTTCGGCGAAGCCAAACAGCTGGCCGACGGCAGCAGCGATGCCAATGTCCGCGTTGCGTTCAATCTCCTGCGCGGCTTTGTTCTCATCGGGTGGGCCATTTACCCA RYIDWLLTVPLMCVEFYLLLKTAGASVNMLWRLIGYSVLMLVAGYIGEVSAKMGQPIRGFENFGWGVISTIGWAGIVYEIFFGEAKQLADGSSDANVRVAFNLLRGFVLIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTACATAGATTGG------------------------CTCCTCACCGTGCCTCTCATGTGCGTGGAGTTCTACCTCCTCCTCAAAACG---------GCG------GGTGCCAGCGTG---AATATG------------------------------------CTCTGGCGC---CTCATCGGCTACTCGGTGCTGATGCTCGTCGCCGGTTACATCGGTGAA---------GTT------------------TCC------GCCAAA---------------------------------ATG---GGGCAACCC---ATCCGT---------GGC---------------------------TTCGAAAAC------------------TTCGGCTGG---GGTGTTATCTCCACCATCGGTTGGGCTGGAATCGTCTATGAAATC---------------TTC------TTC---GGCGAAGCCAAACAGCTGGCCGACGGC------AGC---AGCGATGCCAATGTC---CGC---GTT---GCG---TTC---AAT---CTCCTG---CGCGGCTTTGTTCTCATC---------------------------------------------------------------GGGTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLMCVEFYLLLKT---A--GASV-NM------------LWR-LIGYSVLMLVAGYIGE---V------S--AK-----------M-GQP-IR---G---------FEN------FGW-GVISTIGWAGIVYEI-----F--F-GEAKQLADG--S-SDANV-R-V-A-F-N-LL-RGFVLI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env1-Verrumicrobia]_EU563279 [unk-env1-Verrumicrobia] KINp4_env_samples_EU563279 gi|171770568|gb|EU563279| Uncultured microorganism clone KINp4 putative proteorhodopsin gene, partial cds Uncultured microorganism clone KINp4 putative proteorhodopsin gene, partial cds EU563279 [[root proteorhodopsin/env cluster 1/unclassified Verrumicrobia subcluster]] root proteorhodopsin env cluster 1 unclassified Verrumicrobia subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 2003 Lake_Kinneret other freshwater 32.08 35.07 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na AGGTACATAGATTGGCTCCTCACCGTGCCTCTCATGTGCGTGGAGTTCTACCTCCTCCTCAAAACGGCGGGTGCCAGCGTGAATATGCTCTGGCGCCTCATCGGCTACTCGGTGCTGATGCTCGTCGCCGGTTACATCGGTGAAGTTTCCGCCAAAATGGGGCAACCCATCCGTGGCTTCGAAAACTTCGGCTGGGGTGTTATCTCCACCATCGGTTGGGCTGGAATCGTCTATGAAATCTTCTTCGGCGAAGCCAAACAGCTGGCCGACGGCAGCAGCGATGCCAATGTCCGCGTTGCGTTCAATCTCCTGCGCGGCTTTGTTCTCATCGGGTGGGCCATATACCCA RYIDWLLTVPLMCVEFYLLLKTAGASVNMLWRLIGYSVLMLVAGYIGEVSAKMGQPIRGFENFGWGVISTIGWAGIVYEIFFGEAKQLADGSSDANVRVAFNLLRGFVLIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATAGATTGG------------------------CTCCTCACCGTGCCTCTCATGTGCGTGGAGTTCTACCTCCTCCTCAAAACG---------GCG------GGTGCCAGCGTG---AATATG------------------------------------CTCTGGCGC---CTCATCGGCTACTCGGTGCTGATGCTCGTCGCCGGTTACATCGGTGAA---------GTT------------------TCC------GCCAAA---------------------------------ATG---GGGCAACCC---ATCCGT---------GGC---------------------------TTCGAAAAC------------------TTCGGCTGG---GGTGTTATCTCCACCATCGGTTGGGCTGGAATCGTCTATGAAATC---------------TTC------TTC---GGCGAAGCCAAACAGCTGGCCGACGGC------AGC---AGCGATGCCAATGTC---CGC---GTT---GCG---TTC---AAT---CTCCTG---CGCGGCTTTGTTCTCATC---------------------------------------------------------------GGGTGG---------GCCATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLMCVEFYLLLKT---A--GASV-NM------------LWR-LIGYSVLMLVAGYIGE---V------S--AK-----------M-GQP-IR---G---------FEN------FGW-GVISTIGWAGIVYEI-----F--F-GEAKQLADG--S-SDANV-R-V-A-F-N-LL-RGFVLI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env1-Verrumicrobia]_EU563277 [unk-env1-Verrumicrobia] KINp24_env_samples_EU563277 gi|171770564|gb|EU563277| Uncultured microorganism clone KINp24 putative proteorhodopsin gene, partial cds Uncultured microorganism clone KINp24 putative proteorhodopsin gene, partial cds EU563277 [[root proteorhodopsin/env cluster 1/unclassified Verrumicrobia subcluster]] root proteorhodopsin env cluster 1 unclassified Verrumicrobia subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 2003 Lake_Kinneret other freshwater 32.08 35.07 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na AGGTACATTGATTGGCTCCTCACCGTGCCTCTCATGTGCGTGGAGTTCTACCTCCTCCTCAAAACGGCGGGTGCCAGCGTGAATATGCTCTGGCGCCTCATCGGCTACTCGGTGCTGATGCTCGTCGCCGGTTACATCGGTGAAGTTTCCGCCAAAATGGGGCAACCCATCCGTGGCTTCGAAAACTTCGGCTGGGGTGTTATCTCCACCATCGGTTGGGCTGGAATCGTCTATGAAATCTTCTTCGGCGAAGCCAAACAGCTGGCCGACGGCAGCAGCGATGCCAATGTCCGCGTTGCGTTCAATCTCCTGCGCGGCTTTGTTCTCATCGGGTGGGCCATTTACCCA RYIDWLLTVPLMCVEFYLLLKTAGASVNMLWRLIGYSVLMLVAGYIGEVSAKMGQPIRGFENFGWGVISTIGWAGIVYEIFFGEAKQLADGSSDANVRVAFNLLRGFVLIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATTGATTGG------------------------CTCCTCACCGTGCCTCTCATGTGCGTGGAGTTCTACCTCCTCCTCAAAACG---------GCG------GGTGCCAGCGTG---AATATG------------------------------------CTCTGGCGC---CTCATCGGCTACTCGGTGCTGATGCTCGTCGCCGGTTACATCGGTGAA---------GTT------------------TCC------GCCAAA---------------------------------ATG---GGGCAACCC---ATCCGT---------GGC---------------------------TTCGAAAAC------------------TTCGGCTGG---GGTGTTATCTCCACCATCGGTTGGGCTGGAATCGTCTATGAAATC---------------TTC------TTC---GGCGAAGCCAAACAGCTGGCCGACGGC------AGC---AGCGATGCCAATGTC---CGC---GTT---GCG---TTC---AAT---CTCCTG---CGCGGCTTTGTTCTCATC---------------------------------------------------------------GGGTGG---------GCCATTTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLMCVEFYLLLKT---A--GASV-NM------------LWR-LIGYSVLMLVAGYIGE---V------S--AK-----------M-GQP-IR---G---------FEN------FGW-GVISTIGWAGIVYEI-----F--F-GEAKQLADG--S-SDANV-R-V-A-F-N-LL-RGFVLI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env1-Verrumicrobia]_EU563272 [unk-env1-Verrumicrobia] KINp14_env_samples_EU563272 gi|171770554|gb|EU563272| Uncultured microorganism clone KINp14 putative proteorhodopsin gene, partial cds Uncultured microorganism clone KINp14 putative proteorhodopsin gene, partial cds EU563272 [[root proteorhodopsin/env cluster 1/unclassified Verrumicrobia subcluster]] root proteorhodopsin env cluster 1 unclassified Verrumicrobia subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 2003 Lake_Kinneret other freshwater 32.08 35.07 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na AGGTACATAGATTGGCTCCTCACCGTGCCTCTCATGTGCGTGGAGTTCTACCTCCTCCTCAAAACGGCGGGTGCCAGCGTGAATATGCTCTGGCGCCTCATCGGTTACTCGGTGCTGATGCTCGTCGCCGGTTACATCGGTGAAGTTTCCGCCAAAATGGGGAAACCCATCCGTGGCTTCGAAAACTTCGGCTGGGGTGTTATCTCCACCATCGGTTGGGCTGGAATCGTCTATGAAATCTTCTTCGGCGAAGCCAAACAGCTGGCCGACGGCAGCAGCGATGCCAATGTCCGCGTTGCGTTCAATCTCCTGCGCGGCTTTGTTCTCATCGGGTGGGCCATTTATCCA RYIDWLLTVPLMCVEFYLLLKTAGASVNMLWRLIGYSVLMLVAGYIGEVSAKMGKPIRGFENFGWGVISTIGWAGIVYEIFFGEAKQLADGSSDANVRVAFNLLRGFVLIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATAGATTGG------------------------CTCCTCACCGTGCCTCTCATGTGCGTGGAGTTCTACCTCCTCCTCAAAACG---------GCG------GGTGCCAGCGTG---AATATG------------------------------------CTCTGGCGC---CTCATCGGTTACTCGGTGCTGATGCTCGTCGCCGGTTACATCGGTGAA---------GTT------------------TCC------GCCAAA---------------------------------ATG---GGGAAACCC---ATCCGT---------GGC---------------------------TTCGAAAAC------------------TTCGGCTGG---GGTGTTATCTCCACCATCGGTTGGGCTGGAATCGTCTATGAAATC---------------TTC------TTC---GGCGAAGCCAAACAGCTGGCCGACGGC------AGC---AGCGATGCCAATGTC---CGC---GTT---GCG---TTC---AAT---CTCCTG---CGCGGCTTTGTTCTCATC---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLMCVEFYLLLKT---A--GASV-NM------------LWR-LIGYSVLMLVAGYIGE---V------S--AK-----------M-GKP-IR---G---------FEN------FGW-GVISTIGWAGIVYEI-----F--F-GEAKQLADG--S-SDANV-R-V-A-F-N-LL-RGFVLI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env1-Verrumicrobia]_EU563273 [unk-env1-Verrumicrobia] KINp15_env_samples_EU563273 gi|171770556|gb|EU563273| Uncultured microorganism clone KINp15 putative proteorhodopsin gene, partial cds Uncultured microorganism clone KINp15 putative proteorhodopsin gene, partial cds EU563273 [[root proteorhodopsin/env cluster 1/unclassified Verrumicrobia subcluster]] root proteorhodopsin env cluster 1 unclassified Verrumicrobia subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 2003 Lake_Kinneret other freshwater 32.08 35.07 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na AGGTACATTGATTGGCTCCTCACCGTGCCTCTCATGTGCGTGGAGTTCTACCTCCTCCTCAAAACGGCGGGTGCCAGCGTGAATATGCTCTGGCGCCTCATCGGCTACTCGGTGCTGATGCTCGTCGCCGGTTACATCGGTGAAGTTTCCGCCAAAATGGGGCAACCCATCCGTGGCTTCGAAAACTTCGGCTGGGGTGTTATCTCCACCATCGGTTGGGCTGGAATCGTCTATGAAATCTTCTTCGGCGAAGCCAAACAGCTGGCCGACGGCAGCAGCGATGCCAATGTCCGCGTTGCGTTCAATCTCCTGCGCGGCTTTGTTCTCATCGGGTGGGCGATTTATCCA RYIDWLLTVPLMCVEFYLLLKTAGASVNMLWRLIGYSVLMLVAGYIGEVSAKMGQPIRGFENFGWGVISTIGWAGIVYEIFFGEAKQLADGSSDANVRVAFNLLRGFVLIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATTGATTGG------------------------CTCCTCACCGTGCCTCTCATGTGCGTGGAGTTCTACCTCCTCCTCAAAACG---------GCG------GGTGCCAGCGTG---AATATG------------------------------------CTCTGGCGC---CTCATCGGCTACTCGGTGCTGATGCTCGTCGCCGGTTACATCGGTGAA---------GTT------------------TCC------GCCAAA---------------------------------ATG---GGGCAACCC---ATCCGT---------GGC---------------------------TTCGAAAAC------------------TTCGGCTGG---GGTGTTATCTCCACCATCGGTTGGGCTGGAATCGTCTATGAAATC---------------TTC------TTC---GGCGAAGCCAAACAGCTGGCCGACGGC------AGC---AGCGATGCCAATGTC---CGC---GTT---GCG---TTC---AAT---CTCCTG---CGCGGCTTTGTTCTCATC---------------------------------------------------------------GGGTGG---------GCGATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLMCVEFYLLLKT---A--GASV-NM------------LWR-LIGYSVLMLVAGYIGE---V------S--AK-----------M-GQP-IR---G---------FEN------FGW-GVISTIGWAGIVYEI-----F--F-GEAKQLADG--S-SDANV-R-V-A-F-N-LL-RGFVLI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env1-Verrumicrobia]_EU563278 [unk-env1-Verrumicrobia] KINp3_env_samples_EU563278 gi|171770566|gb|EU563278| Uncultured microorganism clone KINp3 putative proteorhodopsin gene, partial cds Uncultured microorganism clone KINp3 putative proteorhodopsin gene, partial cds EU563278 [[root proteorhodopsin/env cluster 1/unclassified Verrumicrobia subcluster]] root proteorhodopsin env cluster 1 unclassified Verrumicrobia subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 2003 Lake_Kinneret other freshwater 32.08 35.07 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na AGGTACATTGATTGGCTCCTCACCGTGCCTCTCATGTGCGTGGAGTTCTACCTCCTCCTCAAAACGGCGGGTGCCAGCGTGAATATGCTCTGGCGCCTCATCGGCTACTCGGTGCTGATGCTCGTCGCCGGTTACATCGGTGAAGTTTCCGCCAAAATGGGGCAACCCATCCGTGGCTTCGAAAACTTCGGCTGGGGTGTTATCTCCACCATCGGTTGGGCTGGAATCGTCTATGAAATCTTCTTCGGCGAAGCCAAACAGCTGGCCGACGGCAGCAGCGATGCCAATGTCCGCGTTGCGTTCAATCTCCTGCGCGGCTTTGTTCTCATCGGGTGGGCCATTTATCCA RYIDWLLTVPLMCVEFYLLLKTAGASVNMLWRLIGYSVLMLVAGYIGEVSAKMGQPIRGFENFGWGVISTIGWAGIVYEIFFGEAKQLADGSSDANVRVAFNLLRGFVLIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATTGATTGG------------------------CTCCTCACCGTGCCTCTCATGTGCGTGGAGTTCTACCTCCTCCTCAAAACG---------GCG------GGTGCCAGCGTG---AATATG------------------------------------CTCTGGCGC---CTCATCGGCTACTCGGTGCTGATGCTCGTCGCCGGTTACATCGGTGAA---------GTT------------------TCC------GCCAAA---------------------------------ATG---GGGCAACCC---ATCCGT---------GGC---------------------------TTCGAAAAC------------------TTCGGCTGG---GGTGTTATCTCCACCATCGGTTGGGCTGGAATCGTCTATGAAATC---------------TTC------TTC---GGCGAAGCCAAACAGCTGGCCGACGGC------AGC---AGCGATGCCAATGTC---CGC---GTT---GCG---TTC---AAT---CTCCTG---CGCGGCTTTGTTCTCATC---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLMCVEFYLLLKT---A--GASV-NM------------LWR-LIGYSVLMLVAGYIGE---V------S--AK-----------M-GQP-IR---G---------FEN------FGW-GVISTIGWAGIVYEI-----F--F-GEAKQLADG--S-SDANV-R-V-A-F-N-LL-RGFVLI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env1-Verrumicrobia]_EU563276 [unk-env1-Verrumicrobia] KINp22_env_samples_EU563276 gi|171770562|gb|EU563276| Uncultured microorganism clone KINp22 putative proteorhodopsin gene, partial cds Uncultured microorganism clone KINp22 putative proteorhodopsin gene, partial cds EU563276 [[root proteorhodopsin/env cluster 1/unclassified Verrumicrobia subcluster]] root proteorhodopsin env cluster 1 unclassified Verrumicrobia subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 2003 Lake_Kinneret other freshwater 32.08 35.07 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na AGCTACATTGATTGGCTCCTCACCGTGCCTCTCATGTGCGTGGAGTTCTACCTCCTCCTCAAAACGGCGGGTGCCAGCGTGAATATGCTCTGGCGCCTCATCGGCTACTCGGTGCTGATGCTCGTCGCCGGTTACATCGGTGAAGTTTCCGCCAAAATGGGGCAACCCATCCGTGGCTTCGAAAACTTCGGCTGGGGTGTTATCTCCACCATCGGTTGGGCTGGAATCGTCTATGAAATCTTCTTCGGCGAAGCCAAACAGCTGGCCGACGGCAGCAGCGATGCCAATGTCCGCGTTGCGTTCAATCTCCTGCGCGGCTTTGTTCTCATCGGGTGGGCCATATATCCA SYIDWLLTVPLMCVEFYLLLKTAGASVNMLWRLIGYSVLMLVAGYIGEVSAKMGQPIRGFENFGWGVISTIGWAGIVYEIFFGEAKQLADGSSDANVRVAFNLLRGFVLIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTACATTGATTGG------------------------CTCCTCACCGTGCCTCTCATGTGCGTGGAGTTCTACCTCCTCCTCAAAACG---------GCG------GGTGCCAGCGTG---AATATG------------------------------------CTCTGGCGC---CTCATCGGCTACTCGGTGCTGATGCTCGTCGCCGGTTACATCGGTGAA---------GTT------------------TCC------GCCAAA---------------------------------ATG---GGGCAACCC---ATCCGT---------GGC---------------------------TTCGAAAAC------------------TTCGGCTGG---GGTGTTATCTCCACCATCGGTTGGGCTGGAATCGTCTATGAAATC---------------TTC------TTC---GGCGAAGCCAAACAGCTGGCCGACGGC------AGC---AGCGATGCCAATGTC---CGC---GTT---GCG---TTC---AAT---CTCCTG---CGCGGCTTTGTTCTCATC---------------------------------------------------------------GGGTGG---------GCCATATATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYIDW--------LLTVPLMCVEFYLLLKT---A--GASV-NM------------LWR-LIGYSVLMLVAGYIGE---V------S--AK-----------M-GQP-IR---G---------FEN------FGW-GVISTIGWAGIVYEI-----F--F-GEAKQLADG--S-SDANV-R-V-A-F-N-LL-RGFVLI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env1-Verrumicrobia]_EU563275 [unk-env1-Verrumicrobia] KINp20_env_samples_EU563275 gi|171770560|gb|EU563275| Uncultured microorganism clone KINp20 putative proteorhodopsin gene, partial cds Uncultured microorganism clone KINp20 putative proteorhodopsin gene, partial cds EU563275 [[root proteorhodopsin/env cluster 1/unclassified Verrumicrobia subcluster]] root proteorhodopsin env cluster 1 unclassified Verrumicrobia subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 2003 Lake_Kinneret other freshwater 32.08 35.07 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na AGGTACATTGATTGGCTCCTCACCGTGCCTCTCATGTGCGTGGAGTTCTACCTCCTCCTCAAAACGGCGGGTGCCAGCGTGAATATGCTCTGGCGCCTCATCGGCTACTCGGTGCTGATGCTCGTCGCCGGTTACATCGGTGAAGTTTCCGCCAAAATGGGGCAACCCATCCGTGGCTTCGAAAACTTCGGCTGGGGTGTTATCTCCACCATCGGTTGGGCTGGAATCGTCTATGGAATCTTCTTCGGCGAAGCCAAACAGCTGGCCGACGGCAGCAGCGATGCCAATGTCCGCGTTGCGTTCAATCTCCTGCGCGGCTTTGTTCTCATCGGGTGGGCCATTTATCCA RYIDWLLTVPLMCVEFYLLLKTAGASVNMLWRLIGYSVLMLVAGYIGEVSAKMGQPIRGFENFGWGVISTIGWAGIVYGIFFGEAKQLADGSSDANVRVAFNLLRGFVLIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATTGATTGG------------------------CTCCTCACCGTGCCTCTCATGTGCGTGGAGTTCTACCTCCTCCTCAAAACG---------GCG------GGTGCCAGCGTG---AATATG------------------------------------CTCTGGCGC---CTCATCGGCTACTCGGTGCTGATGCTCGTCGCCGGTTACATCGGTGAA---------GTT------------------TCC------GCCAAA---------------------------------ATG---GGGCAACCC---ATCCGT---------GGC---------------------------TTCGAAAAC------------------TTCGGCTGG---GGTGTTATCTCCACCATCGGTTGGGCTGGAATCGTCTATGGAATC---------------TTC------TTC---GGCGAAGCCAAACAGCTGGCCGACGGC------AGC---AGCGATGCCAATGTC---CGC---GTT---GCG---TTC---AAT---CTCCTG---CGCGGCTTTGTTCTCATC---------------------------------------------------------------GGGTGG---------GCCATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLMCVEFYLLLKT---A--GASV-NM------------LWR-LIGYSVLMLVAGYIGE---V------S--AK-----------M-GQP-IR---G---------FEN------FGW-GVISTIGWAGIVYGI-----F--F-GEAKQLADG--S-SDANV-R-V-A-F-N-LL-RGFVLI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env1-Verrumicrobia]_EU563293 [unk-env1-Verrumicrobia] Ssee1B_env_samples_EU563293 gi|171770596|gb|EU563293| Uncultured microorganism clone Ssee1B putative proteorhodopsin gene, partial cds Uncultured microorganism clone Ssee1B putative proteorhodopsin gene, partial cds EU563293 [[root proteorhodopsin/env cluster 1/unclassified Verrumicrobia subcluster]] root proteorhodopsin env cluster 1 unclassified Verrumicrobia subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 01-juil-06 Schohsee_at_1m_depth other freshwater 54.15 10.45 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na TGCGCGCAATTCTTGAGATATATCGATTGGCTCCTCACCGTGCCTCTCATGTGCGTGGAGTTCTATCTCCTTCTCAAGGCAGCCGGAGCCAGCATCAACATGCTCTGGCGTCTCATCGGGTACTCTGTACTCATGCTCGTCGCAGGGTATGTCGGCGAAGTCTCTGCTAAACTTGGACAACCCGTTCGCGGTTTCTCCAATTTCGACTGGGGCGTAATCTCCACCATCGGTTGGGCGGGGATCGTCTATGAGATCTTCTTCGGAGAAGCCAAACAGCTGGCCGACGGAAGCAGCGATGCCAACGTCCGCAAAGCCTTCAATCTTCTTCGTGGCTTCGTCCTCATCGGTTGGGCAATTTATCCAAGCTTGCGCGCA CAQFLRYIDWLLTVPLMCVEFYLLLKAAGASINMLWRLIGYSVLMLVAGYVGEVSAKLGQPVRGFSNFDWGVISTIGWAGIVYEIFFGEAKQLADGSSDANVRKAFNLLRGFVLIGWAIYPSLRA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCGCGCAATTCTTGAGATATATCGATTGG------------------------CTCCTCACCGTGCCTCTCATGTGCGTGGAGTTCTATCTCCTTCTCAAGGCA---------GCC------GGAGCCAGCATC---AACATG------------------------------------CTCTGGCGT---CTCATCGGGTACTCTGTACTCATGCTCGTCGCAGGGTATGTCGGCGAA---------GTC------------------TCT------GCTAAA---------------------------------CTT---GGACAACCC---GTTCGC---------GGT---------------------------TTCTCCAAT------------------TTCGACTGG---GGCGTAATCTCCACCATCGGTTGGGCGGGGATCGTCTATGAGATC---------------TTC------TTC---GGAGAAGCCAAACAGCTGGCCGACGGA------AGC---AGCGATGCCAACGTC---CGC---AAA---GCC---TTC---AAT---CTTCTT---CGTGGCTTCGTCCTCATC---------------------------------------------------------------GGTTGG---------GCAATTTATCCAAGCTTGCGCGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAQFLRYIDW--------LLTVPLMCVEFYLLLKA---A--GASI-NM------------LWR-LIGYSVLMLVAGYVGE---V------S--AK-----------L-GQP-VR---G---------FSN------FDW-GVISTIGWAGIVYEI-----F--F-GEAKQLADG--S-SDANV-R-K-A-F-N-LL-RGFVLI---------------------GW---AIYPSLRA---------------------------------------------------------------------------------------------- [unk-env1-Verrumicrobia]_HQ663845 [unk-env1-Verrumicrobia] SCGC_AAA487P23_unclassified_Verrucomicrobia_HQ663845 gi|325163286|gb|HQ663845| Verrucomicrobia bacterium SCGC AAA487P23 rhodopsin gene, partial cds Verrucomicrobia bacterium SCGC AAA487P23 rhodopsin gene, partial cds HQ663845 [[root proteorhodopsin/env cluster 1/unclassified Verrumicrobia subcluster]] root proteorhodopsin env cluster 1 unclassified Verrumicrobia subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/Verrucomicrobia/unclassified Verrucomicrobia] taxon:939146 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATATTGATTGGCTCCTCACCGTGCCACTCATGTGTGTTGAGTTCTATCTCCTTCTCAAGGCCGCCGGTGCGAGCATCAACATGCTCTGGCGCCTCGTCGGCTATGCAATTCTCATGCTCGTCGCCGGCTACGTCGGCGAAGTTTCTGCCAAGGTGGGTCACCCCATCCGCGGATTCGAAAACTTTGGTTGGGGCGTGATCTCGACCATCGGTTGGGCCGGAATCCTCTATGAAATCTTCTTCGGTGAAGCCAAACAGTTGGCCGACGGCAGCAGCGATGCCAACGTCCGCAAGGCCTTCAATCTTCTCCGGGGTTTCGTGCTCATCGGATGGGCCATTTACCCGGTC YIDWLLTVPLMCVEFYLLLKAAGASINMLWRLVGYAILMLVAGYVGEVSAKVGHPIRGFENFGWGVISTIGWAGILYEIFFGEAKQLADGSSDANVRKAFNLLRGFVLIGWAIYPV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATTGATTGG------------------------CTCCTCACCGTGCCACTCATGTGTGTTGAGTTCTATCTCCTTCTCAAGGCC---------GCC------GGTGCGAGCATC---AACATG------------------------------------CTCTGGCGC---CTCGTCGGCTATGCAATTCTCATGCTCGTCGCCGGCTACGTCGGCGAA---------GTT------------------TCT------GCCAAG---------------------------------GTG---GGTCACCCC---ATCCGC---------GGA---------------------------TTCGAAAAC------------------TTTGGTTGG---GGCGTGATCTCGACCATCGGTTGGGCCGGAATCCTCTATGAAATC---------------TTC------TTC---GGTGAAGCCAAACAGTTGGCCGACGGC------AGC---AGCGATGCCAACGTC---CGC---AAG---GCC---TTC---AAT---CTTCTC---CGGGGTTTCGTGCTCATC---------------------------------------------------------------GGATGG---------GCCATTTACCCGGTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YIDW--------LLTVPLMCVEFYLLLKA---A--GASI-NM------------LWR-LVGYAILMLVAGYVGE---V------S--AK-----------V-GHP-IR---G---------FEN------FGW-GVISTIGWAGILYEI-----F--F-GEAKQLADG--S-SDANV-R-K-A-F-N-LL-RGFVLI---------------------GW---AIYPV------------------------------------------------------------------------------------------------- [unk-env1-Verrumicrobia]_EU563328 [unk-env1-Verrumicrobia] Kin_12m_May07G_env_samples_EU563328 gi|171770666|gb|EU563328| Uncultured microorganism clone Kin 12m May07G putative proteorhodopsin gene, partial cds Uncultured microorganism clone Kin 12m May07G putative proteorhodopsin gene, partial cds EU563328 [[root proteorhodopsin/env cluster 1/unclassified Verrumicrobia subcluster]] root proteorhodopsin env cluster 1 unclassified Verrumicrobia subcluster proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 May2007 Lake_Kinneret_at_12m_depth other freshwater 32.08 35.07 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na CGCTATATTGATTGGCTGCTGACCGTGCCGCTGATGTGCGTGGAATTTTATCTGCTGCTGAAAGCGGCGGGCGCGAGCATTAGCATGCTGTGGCGCCTGATTGGCTATAGCGTGCTGATGCTGGTGGCGGGCTATATTGGCGAAGTGAGCGCGAAACTGGGCCAGCCGGTGCGCGGCTTTGAAAACTTTGGCTGGGGCGTGATTAGCACCATTGGCTGGGCGGGCATTGTGTATGAAATTTTTTTTGGCGAAGCGAAACAGCTGGCGGATGGCAGCAGCGATGCGAGCGTGCGCAAAGCGTTTAACCTGCTGCGCGGCTTTGTGCTGATTGGCTGGGCGATTTATCCG RYIDWLLTVPLMCVEFYLLLKAAGASISMLWRLIGYSVLMLVAGYIGEVSAKLGQPVRGFENFGWGVISTIGWAGIVYEIFFGEAKQLADGSSDASVRKAFNLLRGFVLIGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTATATTGATTGG------------------------CTGCTGACCGTGCCGCTGATGTGCGTGGAATTTTATCTGCTGCTGAAAGCG---------GCG------GGCGCGAGCATT---AGCATG------------------------------------CTGTGGCGC---CTGATTGGCTATAGCGTGCTGATGCTGGTGGCGGGCTATATTGGCGAA---------GTG------------------AGC------GCGAAA---------------------------------CTG---GGCCAGCCG---GTGCGC---------GGC---------------------------TTTGAAAAC------------------TTTGGCTGG---GGCGTGATTAGCACCATTGGCTGGGCGGGCATTGTGTATGAAATT---------------TTT------TTT---GGCGAAGCGAAACAGCTGGCGGATGGC------AGC---AGCGATGCGAGCGTG---CGC---AAA---GCG---TTT---AAC---CTGCTG---CGCGGCTTTGTGCTGATT---------------------------------------------------------------GGCTGG---------GCGATTTATCCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLMCVEFYLLLKA---A--GASI-SM------------LWR-LIGYSVLMLVAGYIGE---V------S--AK-----------L-GQP-VR---G---------FEN------FGW-GVISTIGWAGIVYEI-----F--F-GEAKQLADG--S-SDASV-R-K-A-F-N-LL-RGFVLI---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env1]_GU338830 [unk-env1] GH_B_80C9_env_samples_GU338830 gi|283574531|gb|GU338830| Uncultured Antarctic sea ice bacterium clone GH B 80C9 putative proteorhodopsin gene, partial cds Uncultured Antarctic sea ice bacterium clone GH B 80C9 putative proteorhodopsin gene, partial cds GU338830 [[root proteorhodopsin/env cluster 1]] root proteorhodopsin env cluster 1 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:219048 genomic_DNA other 27Aug-2010 #na middle_brine Antarctic Ocean marine -77.016667 162.866667 Proteorhodopsinbearing bacteria in Antarctic sea ice Koh,E.Y., AtamnaIsmaeel,N., Martin,A., Cowie,R.O., Beja,O., Davy,S.K., Maas,E.W. and Ryan,K.G. Appl. Environ. Microbiol. 76 (17), 59185925 (2010) 20601510 #na TGCGCGCAATTCATGCGATACATAGATTGGACCCTTACGGTGCCGTTGATGTGCGTGGAGTTCTTCCTGTTGCTTCGTCCTTATGGCGCCAAGCAGTCGCTCATGTGGAAGATGATTGGTTATTCTGTGCTGATGTTGGTGGCGGGTTACATCGGCGAGGCTTTCGCTGCAACAGCCGCTAACCCTGGAACGCACAGCATTATGTGGGGCTTTATTTCTACCCTGGGTTGGGCCGGTATCGTATACGAAGCCACCATGGGAAGTGTAGCCACCATGGCCAAAGACTCTGGCGATGCACACCTCCAGCGTGCCATTGGTTTGCTCCGCAATTTCGTATTGGTGGGGTGGGCCATTTATCCAAGCTTGCGCGCA CAQFMRYIDWTLTVPLMCVEFFLLLRPYGAKQSLMWKMIGYSVLMLVAGYIGEAFAATAANPGTHSIMWGFISTLGWAGIVYEATMGSVATMAKDSGDAHLQRAIGLLRNFVLVGWAIYPSLRA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCGCGCAATTCATGCGATACATAGATTGG------------------------ACCCTTACGGTGCCGTTGATGTGCGTGGAGTTCTTCCTGTTGCTTCGTCCT---------TAT------GGCGCCAAGCAG---TCGCTC------------------------------------ATGTGGAAG---ATGATTGGTTATTCTGTGCTGATGTTGGTGGCGGGTTACATCGGCGAG---------GCT------------------TTC------GCTGCA---------------------------------------ACAGCCGCT---AACCCT---------GGA---------------------------ACGCACAGC------------------ATTATGTGG---GGCTTTATTTCTACCCTGGGTTGGGCCGGTATCGTATACGAAGCC---------------ACC------ATG---GGAAGTGTAGCCACCATGGCCAAAGAC------TCT---GGCGATGCACACCTC---CAG---CGT---GCC---ATT---GGT---TTGCTC---CGCAATTTCGTATTGGTG---------------------------------------------------------------GGGTGG---------GCCATTTATCCAAGCTTGCGCGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAQFMRYIDW--------TLTVPLMCVEFFLLLRP---Y--GAKQ-SL------------MWK-MIGYSVLMLVAGYIGE---A------F--AA-------------TAA-NP---G---------THS------IMW-GFISTLGWAGIVYEA-----T--M-GSVATMAKD--S-GDAHL-Q-R-A-I-G-LL-RNFVLV---------------------GW---AIYPSLRA---------------------------------------------------------------------------------------------- [unk-env1]_EU915939 [unk-env1] clone_13H01-3_EU915939 gi|229358760|gb|EU915939| Uncultured bacterium clone 13H01-3 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone 13H01-3 putative proteorhodopsin gene, partial cds. EU915939 [[root proteorhodopsin/env cluster 1]] root proteorhodopsin env cluster 1 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGCTGGCCGCTACTGCGTTCTTCTTCTTTGAAAGAAGTCAGGTCGACGGCAAGTGGAAAACCTCCCTTTTGGTTTCGGGCTTGATCACCATGATTGCCGCTGCGCATTATTATTACATGCGCGATTATTATCTCACGGCCGGTATGTCCCCCACACAATTCCGCTACATTGACTGGACCCTTACGGTACCCTTGATGCGCGTGGAGTTCTTCCTGTTGCTTCGTCCTTATGGCGCCAAGCAGTCGCTCATGTGGAAGATGATTGGTTATTCTGTGCTGATGTTGGTGGCGGGTTACATCGGCGAGGCATTCGCTGCAACAGCCGCTATTATGTGGGGCTTTATTTCTACCCTGGGTTGGGCCGGTATCGTATACGAAGCCACCATGGGAAGTGTAGCCTCCATGGCCAAAGACTCTGGCGATGCGCACCTCCAGCGTGCCATTGGTTTGCTCCGCAATTTCGTATTGGTGGGGTGGGCCATCTAT MLAATAFFFFERSQVDGKWKTSLLVSGLITMIAAAHYYYMRDYYLTAGMSPTQFRYIDWTLTVPLMRVEFFLLLRPYGAKQSLMWKMIGYSVLMLVAGYIGEAFAATAAIMWGFISTLGWAGIVYEATMGSVASMAKDSGDAHLQRAIGLLRNFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTGGCCGCTACTGCGTTCTTCTTCTTTGAAAGAAGTCAGGTCGACGGCAAGTGGAAAACCTCCCTTTTGGTTTCGGGCTTGATCACCATGATTGCCGCTGCGCATTATTATTACATGCGCGATTATTATCTC---------------------------------------------------ACGGCCGGTATGTCCCCCACACAATTCCGCTACATTGACTGG------------------------ACCCTTACGGTACCCTTGATGCGCGTGGAGTTCTTCCTGTTGCTTCGTCCT---------TAT------GGCGCCAAGCAG---TCGCTC------------------------------------ATGTGGAAG---ATGATTGGTTATTCTGTGCTGATGTTGGTGGCGGGTTACATCGGCGAG---------GCA------------------TTC------GCTGCA------------------------------------------------------------------------------------------------ACAGCCGCT------------------ATTATGTGG---GGCTTTATTTCTACCCTGGGTTGGGCCGGTATCGTATACGAAGCC---------------ACC------ATG---GGAAGTGTAGCCTCCATGGCCAAAGAC------TCT---GGCGATGCGCACCTC---CAG---CGT---GCC---ATT---GGT---TTGCTC---CGCAATTTCGTATTGGTG---------------------------------------------------------------GGGTGG---------GCCATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MLAATAFFFFERSQVDGKWKTSLLVSGLITMIAAAHYYYMRDYYL-----------------TAGMSPTQFRYIDW--------TLTVPLMRVEFFLLLRP---Y--GAKQ-SL------------MWK-MIGYSVLMLVAGYIGE---A------F--AA--------------------------------TAA------IMW-GFISTLGWAGIVYEA-----T--M-GSVASMAKD--S-GDAHL-Q-R-A-I-G-LL-RNFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [unk-env1]_EU563304 [unk-env1] Kin_6m_July07A_env_samples_EU563304 gi|171770618|gb|EU563304| Uncultured microorganism clone Kin 6m July07A putative proteorhodopsin gene, partial cds Uncultured microorganism clone Kin 6m July07A putative proteorhodopsin gene, partial cds EU563304 [[root proteorhodopsin/env cluster 1]] root proteorhodopsin env cluster 1 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic_DNA other 19-juin-08 01-juil-07 Lake_Kinneret_at_6m_depth other freshwater 32.08 35.07 Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems AtamnaIsmaeel,N., Sabehi,G., Sharon,I., Witzel,K.P., Labrenz,M., Jurgens,K., Barkay,T., Stomp,M., Huisman,J. and Beja,O. ISME J 2 (6), 656662 (2008) 18369329 #na CGGTATATAGATTGGACCTTGACGGTTCCCTTGATGTGCGTTGAATTTTACCTGTTGTTGAAGCCCTACGGCGCAAAGCAAGGCCTCTTGTGGAAAATGATCGGTTATTCGGTTTTGATGCTTGTGGCTGGCTACATTGGCGAAGCAGTTCAACCTGAATCCACCATCCTTTGGGGTGTGATTTCTACCTTGGGTTGGGCAGGTATCGTCTACGAAGCCACCGCAGGTTCTGTAGCCGGAATGGCTCGCGAATCCGGTGATGCGAATCTCCAAAACGCTATCCGTCTTCTACGCGATTTTGTATTGGTCGGATGGGCCATATACCCA RYIDWTLTVPLMCVEFYLLLKPYGAKQGLLWKMIGYSVLMLVAGYIGEAVQPESTILWGVISTLGWAGIVYEATAGSVAGMARESGDANLQNAIRLLRDFVLVGWAIYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTATATAGATTGG------------------------ACCTTGACGGTTCCCTTGATGTGCGTTGAATTTTACCTGTTGTTGAAGCCC---------TAC------GGCGCAAAGCAA---GGCCTC------------------------------------TTGTGGAAA---ATGATCGGTTATTCGGTTTTGATGCTTGTGGCTGGCTACATTGGCGAA---------GCA------------------GTT------CAACCT------------------------------------------------------------------------------------------------GAATCCACC------------------ATCCTTTGG---GGTGTGATTTCTACCTTGGGTTGGGCAGGTATCGTCTACGAAGCC---------------ACC------GCA---GGTTCTGTAGCCGGAATGGCTCGCGAA------TCC---GGTGATGCGAATCTC---CAA---AAC---GCT---ATC---CGT---CTTCTA---CGCGATTTTGTATTGGTC---------------------------------------------------------------GGATGG---------GCCATATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------TLTVPLMCVEFYLLLKP---Y--GAKQ-GL------------LWK-MIGYSVLMLVAGYIGE---A------V--QP--------------------------------EST------ILW-GVISTLGWAGIVYEA-----T--A-GSVAGMARE--S-GDANL-Q-N-A-I-R-LL-RDFVLV---------------------GW---AIYP-------------------------------------------------------------------------------------------------- [unk-env1]_EU915936 [unk-env1] clone_xd222_EU915936 gi|229358754|gb|EU915936| Uncultured bacterium clone xd222 putative proteorhodopsin gene, partial cds. Uncultured bacterium clone xd222 putative proteorhodopsin gene, partial cds. EU915936 [[root proteorhodopsin/env cluster 1]] root proteorhodopsin env cluster 1 proteorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Blue-Green (M105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 31-DEC-2009 #na ocean sample from China Sea China Sea marine #na Direct Submission Wei,B. and Jiao,N. Submitted (20-JUL-2008) State Key Laboratory of Marine Environmental Science, Xiamen University, South Siming Road 422, Xiamen, Fujian 361005, P. R. China #na #na ATGGTGGCCGCTACTGCTTTCTTCTTTTTCGAAAGAAGTCAAGTAGATGGCAAATGGAAAACCTCACTCCTGGTTTCAGGATTGATCACCATGATTGCCGCAGCGCATTACTATTACATGCGCGATTATTATCTCACCTCGGGTATGTCTCCTACGCAGTTCCGTTACATTGACTGGACCTTGACGGTACCGTTGATGTGTGTGGAATTTTATCTCCTTCTGAAGCCATTCGGCGCAAAGCAGGGTCTTCTTTGGGAGATGATTGGTTATTCGGTGTTGATGCTTGTCGCCGGTTATATCGGTGAAGCTGTGCAACCTGAATCCACCATCTTGTGGGGTGTGATTTCCACCTTGGGCTGGGCAGGTATCGTTTACGAAGCTACTGCCGGTTCCGTTGCATCGATGGCCCGTGAATCAGGAGATGCTAACCTCCAAAATGCAATTCGCCTTCTGCGTAATTTCGTGTTGGTAGGTTGGGCAATCTAC MVAATAFFFFERSQVDGKWKTSLLVSGLITMIAAAHYYYMRDYYLTSGMSPTQFRYIDWTLTVPLMCVEFYLLLKPFGAKQGLLWEMIGYSVLMLVAGYIGEAVQPESTILWGVISTLGWAGIVYEATAGSVASMARESGDANLQNAIRLLRNFVLVGWAIY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTGGCCGCTACTGCTTTCTTCTTTTTCGAAAGAAGTCAAGTAGATGGCAAATGGAAAACCTCACTCCTGGTTTCAGGATTGATCACCATGATTGCCGCAGCGCATTACTATTACATGCGCGATTATTATCTC---------------------------------------------------ACCTCGGGTATGTCTCCTACGCAGTTCCGTTACATTGACTGG------------------------ACCTTGACGGTACCGTTGATGTGTGTGGAATTTTATCTCCTTCTGAAGCCA---------TTC------GGCGCAAAGCAG---GGTCTT------------------------------------CTTTGGGAG---ATGATTGGTTATTCGGTGTTGATGCTTGTCGCCGGTTATATCGGTGAA---------GCT------------------GTG------CAACCT------------------------------------------------------------------------------------------------GAATCCACC------------------ATCTTGTGG---GGTGTGATTTCCACCTTGGGCTGGGCAGGTATCGTTTACGAAGCT---------------ACT------GCC---GGTTCCGTTGCATCGATGGCCCGTGAA------TCA---GGAGATGCTAACCTC---CAA---AAT---GCA---ATT---CGC---CTTCTG---CGTAATTTCGTGTTGGTA---------------------------------------------------------------GGTTGG---------GCAATCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------MVAATAFFFFERSQVDGKWKTSLLVSGLITMIAAAHYYYMRDYYL-----------------TSGMSPTQFRYIDW--------TLTVPLMCVEFYLLLKP---F--GAKQ-GL------------LWE-MIGYSVLMLVAGYIGE---A------V--QP--------------------------------EST------ILW-GVISTLGWAGIVYEA-----T--A-GSVASMARE--S-GDANL-Q-N-A-I-R-LL-RNFVLV---------------------GW---AIY--------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663733 [Actinorhodopsin] SCGC_AAA024D14_Actinobacteria_HQ663733 gi|325163066|gb|HQ663733| Actinobacterium SCGC AAA024D14 rhodopsin gene, partial cds Actinobacterium SCGC AAA024D14 rhodopsin gene, partial cds HQ663733 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:932039 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Sparkling other freshwater 46.0095 -89.7006 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTTGATTGGCTACTCACAGTGCCACTACTTCTTGTTGAAGTAGTTGCAGTACTTGCACTAGCCAAGGAAGTTTCACGTTCCCTCATCACGCGCTTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGATACCCAGGTGAAATTTCAAGCGATCAGAACACACAGGTTATGTACGGTGTTCTATCAACACTTCCATTCATTTACATCCTTTACGTTCTATTCGTAGAACTAGGTAAGTCACTTGAGCGTCAACCAGCAGGAGTAGCAGAGACCGTTGGTCGCTTGCGTCTTCTATTGATCGCTACATGGGGCGTCTACCCGATGGTCATA YVDWLLTVPLLLVEVVAVLALAKEVSRSLITRLVPASAAMIALGYPGEISSDQNTQVMYGVLSTLPFIYILYVLFVELGKSLERQPAGVAETVGRLRLLLIATWGVYPMVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTTGATTGG------------------------CTACTCACAGTGCCACTACTTCTTGTTGAAGTAGTTGCAGTACTTGCACTA---------GCC---AAGGAAGTTTCACGT---TCCCTC------------------------------------ATCACGCGC---TTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGATACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AGCGAT---------CAG---------------------------AACACACAG------------------GTTATGTAC---GGTGTTCTATCAACACTTCCATTCATTTACATCCTTTACGTTCTA---------------TTC------GTA---GAACTAGGTAAGTCACTTGAGCGTCAA---------------CCAGCAGGAGTA---GCA---GAG---ACC---GTT---GGT---CGCTTG---CGTCTTCTATTGATCGCT---------------------------------------------------------------ACATGG---------GGCGTCTACCCGATGGTCATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLLVEVVAVLAL---A-KEVSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-SD---Q---------NTQ------VMY-GVLSTLPFIYILYVL-----F--V-ELGKSLERQ-----PAGV-A-E-T-V-G-RL-RLLLIA---------------------TW---GVYPMVI----------------------------------------------------------------------------------------------- [Actinorhodopsin]_FJ545181 [Actinorhodopsin] clone_Erie_LG_C2_rhodopsin_gene_partial_cds_FJ545181 gi|224384037|gb|FJ545181| Uncultured microorganism clone Erie.LG.C2 putative rhodopsin gene, partial cds. Uncultured microorganism clone Erie.LG.C2 putative rhodopsin gene, partial cds. FJ545181 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juil-05 Lake Erie other freshwater 41.9461 -81.6461 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTACTCACAGTGCCACTACTTCTTGTTGAAGTAGTTGCAGTACTTGCACTAGCCAAGGAAGTTTCACGTTCCCTCATCACGCGCTTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGATACCCAGGTGAAATTTCAAGCGATCAGAACACACAGGTTATGTACGGTGTTCTATCAACACTTCCATTCATTTACATCCTTTACGTTCTATTCGTAGAACTAGGTAAGTCACTTGAGCGTCAACCAGCAGGAGTAGCAGAGACCGTTGGTCGCTTGCGTCTTCTATTGATCGCTACA LLTVPLLLVEVVAVLALAKEVSRSLITRLVPASAAMIALGYPGEISSDQNTQVMYGVLSTLPFIYILYVLFVELGKSLERQPAGVAETVGRLRLLLIAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTCACAGTGCCACTACTTCTTGTTGAAGTAGTTGCAGTACTTGCACTA---------GCC---AAGGAAGTTTCACGT---TCCCTC------------------------------------ATCACGCGC---TTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGATACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AGCGAT---------CAG---------------------------AACACACAG------------------GTTATGTAC---GGTGTTCTATCAACACTTCCATTCATTTACATCCTTTACGTTCTA---------------TTC------GTA---GAACTAGGTAAGTCACTTGAGCGTCAA---------------CCAGCAGGAGTA---GCA---GAG---ACC---GTT---GGT---CGCTTG---CGTCTTCTATTGATCGCT---------------------------------------------------------------ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLLVEVVAVLAL---A-KEVSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-SD---Q---------NTQ------VMY-GVLSTLPFIYILYVL-----F--V-ELGKSLERQ-----PAGV-A-E-T-V-G-RL-RLLLIA---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_FJ545180 [Actinorhodopsin] clone_Erie_LG_B2_rhodopsin_gene_partial_cds_FJ545180 gi|224384035|gb|FJ545180| Uncultured microorganism clone Erie.LG.B2 putative rhodopsin gene, partial cds. Uncultured microorganism clone Erie.LG.B2 putative rhodopsin gene, partial cds. FJ545180 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juil-05 Lake Erie other freshwater 41.9461 -81.6461 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTACTCACAGTGCCACTACTTCTTGTTGAAGTAGTTGCAGTACTTGCACTAGCCAAGGAAGTTTCACGTTCCCTCATCACGCGCTTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGATACCCAGGTGAAATTTCAAGCGATCAGAACACACAGGTTATGTACGGTGTTCTATCAACACTTCCATTCATTTACATCCTTTACGTTCTATTCGTAGAACTAGGTAAGTCACTTGAGCGTCAACCAGCAGGAGTAGCAGAGACCGTTGGTCGCTTGCGTCTTCTATTGATCGCTACA LLTVPLLLVEVVAVLALAKEVSRSLITRLVPASAAMIALGYPGEISSDQNTQVMYGVLSTLPFIYILYVLFVELGKSLERQPAGVAETVGRLRLLLIAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTCACAGTGCCACTACTTCTTGTTGAAGTAGTTGCAGTACTTGCACTA---------GCC---AAGGAAGTTTCACGT---TCCCTC------------------------------------ATCACGCGC---TTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGATACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AGCGAT---------CAG---------------------------AACACACAG------------------GTTATGTAC---GGTGTTCTATCAACACTTCCATTCATTTACATCCTTTACGTTCTA---------------TTC------GTA---GAACTAGGTAAGTCACTTGAGCGTCAA---------------CCAGCAGGAGTA---GCA---GAG---ACC---GTT---GGT---CGCTTG---CGTCTTCTATTGATCGCT---------------------------------------------------------------ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLLVEVVAVLAL---A-KEVSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-SD---Q---------NTQ------VMY-GVLSTLPFIYILYVL-----F--V-ELGKSLERQ-----PAGV-A-E-T-V-G-RL-RLLLIA---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_FJ545175 [Actinorhodopsin] clone_Erie_LG_D1_rhodopsin_gene_partial_cds_FJ545175 gi|224384025|gb|FJ545175| Uncultured microorganism clone Erie.LG.D1 putative rhodopsin gene, partial cds. Uncultured microorganism clone Erie.LG.D1 putative rhodopsin gene, partial cds. FJ545175 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juil-05 Lake Erie other freshwater 41.9461 -81.6461 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTACTCACAGTGCCACTACTTCTTGTTGAAGTAGTTGCAGTACTTGCACTAGCCAAGGAAGTTTCACGTTCCCTCATCACGCGCTTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGATACCCAGGTGAAATTTCAAGCGATCAGAACACACAGGTTATGTACGGTGTTCTATCAACACTTCCATTCATTTACATCCTTTACGTTCTATTCGTAGAACTAGGTAAGTCACTTGAGCGTCAACCAGCAGGAGTAGCAGAGACCGTTGGTCGCTTGCGTCTTCTATTGATCGCTACA LLTVPLLLVEVVAVLALAKEVSRSLITRLVPASAAMIALGYPGEISSDQNTQVMYGVLSTLPFIYILYVLFVELGKSLERQPAGVAETVGRLRLLLIAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTCACAGTGCCACTACTTCTTGTTGAAGTAGTTGCAGTACTTGCACTA---------GCC---AAGGAAGTTTCACGT---TCCCTC------------------------------------ATCACGCGC---TTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGATACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AGCGAT---------CAG---------------------------AACACACAG------------------GTTATGTAC---GGTGTTCTATCAACACTTCCATTCATTTACATCCTTTACGTTCTA---------------TTC------GTA---GAACTAGGTAAGTCACTTGAGCGTCAA---------------CCAGCAGGAGTA---GCA---GAG---ACC---GTT---GGT---CGCTTG---CGTCTTCTATTGATCGCT---------------------------------------------------------------ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLLVEVVAVLAL---A-KEVSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-SD---Q---------NTQ------VMY-GVLSTLPFIYILYVL-----F--V-ELGKSLERQ-----PAGV-A-E-T-V-G-RL-RLLLIA---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_FJ545184 [Actinorhodopsin] clone_Erie_LG_F2_rhodopsin_gene_partial_cds_FJ545184 gi|224384043|gb|FJ545184| Uncultured microorganism clone Erie.LG.F2 putative rhodopsin gene, partial cds. Uncultured microorganism clone Erie.LG.F2 putative rhodopsin gene, partial cds. FJ545184 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juil-05 Lake Erie other freshwater 41.9461 -81.6461 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTACTCACAGTGCCACTACTTCTTGTTGAAGTAGTTGCAGTACTTGCACTAGCCAAGGAAGTTTCACGTTCCCTCATCACGCGCTTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGATACCCAGGTGAAATTTCAAGCGATCAGAACACACAGGTTATGTACGGTGTTCTATCAACACTTCCATTCATTTACATCCTTTACGTTCTATTCGTAGAACTAGGTAAGTCACTTGAGCGTCAACCAGCAGGAGTAGCAGAGACCGTTGGTCGCTTGCGTCTTCTATTGATCGCTACA LLTVPLLLVEVVAVLALAKEVSRSLITRLVPASAAMIALGYPGEISSDQNTQVMYGVLSTLPFIYILYVLFVELGKSLERQPAGVAETVGRLRLLLIAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTCACAGTGCCACTACTTCTTGTTGAAGTAGTTGCAGTACTTGCACTA---------GCC---AAGGAAGTTTCACGT---TCCCTC------------------------------------ATCACGCGC---TTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGATACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AGCGAT---------CAG---------------------------AACACACAG------------------GTTATGTAC---GGTGTTCTATCAACACTTCCATTCATTTACATCCTTTACGTTCTA---------------TTC------GTA---GAACTAGGTAAGTCACTTGAGCGTCAA---------------CCAGCAGGAGTA---GCA---GAG---ACC---GTT---GGT---CGCTTG---CGTCTTCTATTGATCGCT---------------------------------------------------------------ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLLVEVVAVLAL---A-KEVSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-SD---Q---------NTQ------VMY-GVLSTLPFIYILYVL-----F--V-ELGKSLERQ-----PAGV-A-E-T-V-G-RL-RLLLIA---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_FJ545185 [Actinorhodopsin] clone_Erie_LG_G2_rhodopsin_gene_partial_cds_FJ545185 gi|224384045|gb|FJ545185| Uncultured microorganism clone Erie.LG.G2 putative rhodopsin gene, partial cds. Uncultured microorganism clone Erie.LG.G2 putative rhodopsin gene, partial cds. FJ545185 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juil-05 Lake Erie other freshwater 41.9461 -81.6461 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTACTCACAGTGCCACTACTTCTTGTTGAAGTAGTTGCAGTACTTGCACTAGCCAAGGAAGTTTCACGTTCCCTCATCACGCGCTTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGATACCCAGGTGAAATTTCAAGCGATCAGAACACACAGGTTATGTACGGTGTTCTATCAACACTTCCATTCATTTACATCCTTTACGTTCTATTCGTAGAACTAGGTAAGTCACTTGAGCGTCAACCAGCAGGAGTAGCAGAGACCGTTGGTCGCTTGCGTCTTCTATTGATCGCTACA LLTVPLLLVEVVAVLALAKEVSRSLITRLVPASAAMIALGYPGEISSDQNTQVMYGVLSTLPFIYILYVLFVELGKSLERQPAGVAETVGRLRLLLIAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTCACAGTGCCACTACTTCTTGTTGAAGTAGTTGCAGTACTTGCACTA---------GCC---AAGGAAGTTTCACGT---TCCCTC------------------------------------ATCACGCGC---TTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGATACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AGCGAT---------CAG---------------------------AACACACAG------------------GTTATGTAC---GGTGTTCTATCAACACTTCCATTCATTTACATCCTTTACGTTCTA---------------TTC------GTA---GAACTAGGTAAGTCACTTGAGCGTCAA---------------CCAGCAGGAGTA---GCA---GAG---ACC---GTT---GGT---CGCTTG---CGTCTTCTATTGATCGCT---------------------------------------------------------------ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLLVEVVAVLAL---A-KEVSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-SD---Q---------NTQ------VMY-GVLSTLPFIYILYVL-----F--V-ELGKSLERQ-----PAGV-A-E-T-V-G-RL-RLLLIA---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_FJ545176 [Actinorhodopsin] clone_Erie_LG_F1_rhodopsin_gene_partial_cds_FJ545176 gi|224384027|gb|FJ545176| Uncultured microorganism clone Erie.LG.F1 putative rhodopsin gene, partial cds. Uncultured microorganism clone Erie.LG.F1 putative rhodopsin gene, partial cds. FJ545176 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juil-05 Lake Erie other freshwater 41.9461 -81.6461 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTACTCACAGTGCCACTACTTCTTGTTGAAGTAGTTGCAGTACTTGCACTAGCCAAGGAAGTTTCACGTTCCCTCATCACGCGCTTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGATACCCAGGTGAAATTTCAAGCGATCAGAACACACAGGTTATGTACGGTGTTCTATCAACACTTCCATTCATTTACATCCTTTACGTTCTATTCGTAGAACTAGGTAAGTCACTTGAGCGTCAACCAGCAGGAGTAGCAGAGACCGTTGGTCGCTTGCGTCTTCTATTGATCGCTACA LLTVPLLLVEVVAVLALAKEVSRSLITRLVPASAAMIALGYPGEISSDQNTQVMYGVLSTLPFIYILYVLFVELGKSLERQPAGVAETVGRLRLLLIAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTCACAGTGCCACTACTTCTTGTTGAAGTAGTTGCAGTACTTGCACTA---------GCC---AAGGAAGTTTCACGT---TCCCTC------------------------------------ATCACGCGC---TTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGATACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AGCGAT---------CAG---------------------------AACACACAG------------------GTTATGTAC---GGTGTTCTATCAACACTTCCATTCATTTACATCCTTTACGTTCTA---------------TTC------GTA---GAACTAGGTAAGTCACTTGAGCGTCAA---------------CCAGCAGGAGTA---GCA---GAG---ACC---GTT---GGT---CGCTTG---CGTCTTCTATTGATCGCT---------------------------------------------------------------ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLLVEVVAVLAL---A-KEVSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-SD---Q---------NTQ------VMY-GVLSTLPFIYILYVL-----F--V-ELGKSLERQ-----PAGV-A-E-T-V-G-RL-RLLLIA---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_FJ545190 [Actinorhodopsin] clone_Erie_LGR_E1_rhodopsin_gene_partial_cds_FJ545190 gi|224384055|gb|FJ545190| Uncultured microorganism clone Erie.LGR.E1 putative rhodopsin gene, partial cds. Uncultured microorganism clone Erie.LGR.E1 putative rhodopsin gene, partial cds. FJ545190 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juil-05 Lake Erie other freshwater 41.9461 -81.6461 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTCACAGTGCCACTACTTCTTGTTGAAGTAGTTGCAGTACTTGCACTAGCCAAGGAAGTTTCACGTTCCCTCATCACGCGCTTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGATACCCAGGTGAAATTTCAAGCGATCAGAACACACAGGTTATGTACGGTGTTCTATCAACACTTCCATTCATTTACATCCTTTACGTTCTATTCGTAGAACTAGGTAAGTCACTTGAGCGTCAACCAGCAGGAGTAGCAGAGACCGTTGGTCGCTTGCGTCTTCTATTGATCGCTACA LTVPLLLVEVVAVLALAKEVSRSLITRLVPASAAMIALGYPGEISSDQNTQVMYGVLSTLPFIYILYVLFVELGKSLERQPAGVAETVGRLRLLLIAT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCACAGTGCCACTACTTCTTGTTGAAGTAGTTGCAGTACTTGCACTA---------GCC---AAGGAAGTTTCACGT---TCCCTC------------------------------------ATCACGCGC---TTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGATACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AGCGAT---------CAG---------------------------AACACACAG------------------GTTATGTAC---GGTGTTCTATCAACACTTCCATTCATTTACATCCTTTACGTTCTA---------------TTC------GTA---GAACTAGGTAAGTCACTTGAGCGTCAA---------------CCAGCAGGAGTA---GCA---GAG---ACC---GTT---GGT---CGCTTG---CGTCTTCTATTGATCGCT---------------------------------------------------------------ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTVPLLLVEVVAVLAL---A-KEVSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-SD---Q---------NTQ------VMY-GVLSTLPFIYILYVL-----F--V-ELGKSLERQ-----PAGV-A-E-T-V-G-RL-RLLLIA---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_FJ545188 [Actinorhodopsin] clone_Erie_LGR_C1_rhodopsin_gene_partial_cds_FJ545188 gi|224384051|gb|FJ545188| Uncultured microorganism clone Erie.LGR.C1 putative rhodopsin gene, partial cds. Uncultured microorganism clone Erie.LGR.C1 putative rhodopsin gene, partial cds. FJ545188 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juil-05 Lake Erie other freshwater 41.9461 -81.6461 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTCACAGTGCCACTACTTCTTGTTGAAGTAGTTGCAGTACTTGCACTAGCCAAGGAAGTTTCACGTTCCCTCATCACGCGCTTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGATACCCAGGTGAAATTTCAAGCGATCAGAACACACAGGTTATGTACGGTGTTCTATCAACACTTCCATTCATTTACATCCTTTACGTTCTATTCGTAGAACTAGGTAAGTCACTTGAGCGTCAACCAGCAGGAGTAGCAGAGACCGTTGGTCGCTTGCGTCTTCTATTGATCGCTACA LTVPLLLVEVVAVLALAKEVSRSLITRLVPASAAMIALGYPGEISSDQNTQVMYGVLSTLPFIYILYVLFVELGKSLERQPAGVAETVGRLRLLLIAT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCACAGTGCCACTACTTCTTGTTGAAGTAGTTGCAGTACTTGCACTA---------GCC---AAGGAAGTTTCACGT---TCCCTC------------------------------------ATCACGCGC---TTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGATACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AGCGAT---------CAG---------------------------AACACACAG------------------GTTATGTAC---GGTGTTCTATCAACACTTCCATTCATTTACATCCTTTACGTTCTA---------------TTC------GTA---GAACTAGGTAAGTCACTTGAGCGTCAA---------------CCAGCAGGAGTA---GCA---GAG---ACC---GTT---GGT---CGCTTG---CGTCTTCTATTGATCGCT---------------------------------------------------------------ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTVPLLLVEVVAVLAL---A-KEVSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-SD---Q---------NTQ------VMY-GVLSTLPFIYILYVL-----F--V-ELGKSLERQ-----PAGV-A-E-T-V-G-RL-RLLLIA---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HE646853 [Actinorhodopsin] clone_QiwNWEx6_HE646853 gi|363805872|gb|HE646853| Uncultured bacterium partial actR gene for Actinorhodopsin, clone QiwNWEx6. Uncultured bacterium partial actR gene for Actinorhodopsin, clone QiwNWEx6. HE646853 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 19-nov-12 2010 Lake Stechlin surface water other freshwater 53.17 13.03 Environmental actinorhodopsin expression revealed by a new in situ filtration and fixation sampler Wurzbacher,C., Salka,I. and Grossart,H.P. Environ Microbiol Rep 4 (5), 491-497 (2012) 23760893 acI-like TACCGGTACGTTGATTGGCTACTCACAGTGCCACTACTTCTAGTTGAAGTAGTTGCAGTACTTGCATTAGCTAAGGAAGTTTCACGTTCCCTCATCACGCGCTTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGATACCCAGGTGAAATTTCAAGCGATCAGAACACACAGGTTATGTACGGTGTTCTATCAACACTTCCATTCATCTACATCCTTTACGTTCTATTCGTAGAACTAGGTAAGTCACTTGAGCGTCAACCAGCAGGAGTTGCAGAGACCGTAGGTCGTTTGCGTCTTCTATTGATCGCTACATGGGGCGTCTACCCAATA YRYVDWLLTVPLLLVEVVAVLALAKEVSRSLITRLVPASAAMIALGYPGEISSDQNTQVMYGVLSTLPFIYILYVLFVELGKSLERQPAGVAETVGRLRLLLIATWGVYPI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCGGTACGTTGATTGG------------------------CTACTCACAGTGCCACTACTTCTAGTTGAAGTAGTTGCAGTACTTGCATTA---------GCT---AAGGAAGTTTCACGT---TCCCTC------------------------------------ATCACGCGC---TTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGATACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AGCGAT---------CAG---------------------------AACACACAG------------------GTTATGTAC---GGTGTTCTATCAACACTTCCATTCATCTACATCCTTTACGTTCTA---------------TTC------GTA---GAACTAGGTAAGTCACTTGAGCGTCAA---------------CCAGCAGGAGTT---GCA---GAG---ACC---GTA---GGT---CGTTTG---CGTCTTCTATTGATCGCT---------------------------------------------------------------ACATGG---------GGCGTCTACCCAATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYVDW--------LLTVPLLLVEVVAVLAL---A-KEVSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-SD---Q---------NTQ------VMY-GVLSTLPFIYILYVL-----F--V-ELGKSLERQ-----PAGV-A-E-T-V-G-RL-RLLLIA---------------------TW---GVYPI------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HE646857 [Actinorhodopsin] clone_QixNWExp_HE646857 gi|363805880|gb|HE646857| Uncultured bacterium partial actR gene for Actinorhodopsin, clone QixNWExp. Uncultured bacterium partial actR gene for Actinorhodopsin, clone QixNWExp. HE646857 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 19-nov-12 2010 Lake Stechlin surface water other freshwater 53.17 13.03 Environmental actinorhodopsin expression revealed by a new in situ filtration and fixation sampler Wurzbacher,C., Salka,I. and Grossart,H.P. Environ Microbiol Rep 4 (5), 491-497 (2012) 23760893 acI-like TATCGGTATGTTGATTGGCTACTCACAGTGCCACTACTTCTAGTTGAAGTAGTTGCAGTACTTGCATTAGCTAAGGAAGTTTCACGTTCCCTCATCACGCGCTTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGATACCCAGGTGAAATTTCAAGCGATCAGAACACACAGGTTATGTACGGTGTTCTATCAACACTTCCATTCATCTACATCCTTTACGTTCTATTCGTAGAACTAGGTAAGTCACTAGAGCGTCAACCAGCAGGAGTTGCAGAGACCGTAGGTCGTTTGCGTCTTCTATTGATCGCTACATGGGGAGTCTACCTATA YRYVDWLLTVPLLLVEVVAVLALAKEVSRSLITRLVPASAAMIALGYPGEISSDQNTQVMYGVLSTLPFIYILYVLFVELGKSLERQPAGVAETVGRLRLLLIATWGVYL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCGGTATGTTGATTGG------------------------CTACTCACAGTGCCACTACTTCTAGTTGAAGTAGTTGCAGTACTTGCATTA---------GCT---AAGGAAGTTTCACGT---TCCCTC------------------------------------ATCACGCGC---TTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGATACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AGCGAT---------CAG---------------------------AACACACAG------------------GTTATGTAC---GGTGTTCTATCAACACTTCCATTCATCTACATCCTTTACGTTCTA---------------TTC------GTA---GAACTAGGTAAGTCACTAGAGCGTCAA---------------CCAGCAGGAGTT---GCA---GAG---ACC---GTA---GGT---CGTTTG---CGTCTTCTATTGATCGCT---------------------------------------------------------------ACATGG---------GGAGTCTACCTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYVDW--------LLTVPLLLVEVVAVLAL---A-KEVSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-SD---Q---------NTQ------VMY-GVLSTLPFIYILYVL-----F--V-ELGKSLERQ-----PAGV-A-E-T-V-G-RL-RLLLIA---------------------TW---GVYL-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HE646873 [Actinorhodopsin] clone_QiyNWEx4_HE646873 gi|363805912|gb|HE646873| Uncultured bacterium partial actR gene for Actinorhodopsin, clone QiyNWEx4. Uncultured bacterium partial actR gene for Actinorhodopsin, clone QiyNWEx4. HE646873 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 19-nov-12 2010 Lake Stechlin surface water other freshwater 53.17 13.03 Environmental actinorhodopsin expression revealed by a new in situ filtration and fixation sampler Wurzbacher,C., Salka,I. and Grossart,H.P. Environ Microbiol Rep 4 (5), 491-497 (2012) 23760893 acI-like AGGTACATTGACTGGCTACTCACAGTGCCACTACTTCTTGTTGAAGTAGTTGCAGTACTTGCATTGGCTAAGGAAGTTTCACGTTCCCTCATCACGCGCTTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGATACCCAGGTGAAATTTCAAGCGATCAGAACACACAGGTTATGTACGGTGTTCTATCAACACTTCCATTCATCTACATCCTTTACGTTCTATTCGTAGAACTAGGTAAGTCACTTGAGCGTCAACCAGCAGGAGTTGCAGAGACCGTAGGTCGTTTGCGTCTTCTATTGATCGCTACATGGGGCGTATACCCGATA RYIDWLLTVPLLLVEVVAVLALAKEVSRSLITRLVPASAAMIALGYPGEISSDQNTQVMYGVLSTLPFIYILYVLFVELGKSLERQPAGVAETVGRLRLLLIATWGVYPI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATTGACTGG------------------------CTACTCACAGTGCCACTACTTCTTGTTGAAGTAGTTGCAGTACTTGCATTG---------GCT---AAGGAAGTTTCACGT---TCCCTC------------------------------------ATCACGCGC---TTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGATACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AGCGAT---------CAG---------------------------AACACACAG------------------GTTATGTAC---GGTGTTCTATCAACACTTCCATTCATCTACATCCTTTACGTTCTA---------------TTC------GTA---GAACTAGGTAAGTCACTTGAGCGTCAA---------------CCAGCAGGAGTT---GCA---GAG---ACC---GTA---GGT---CGTTTG---CGTCTTCTATTGATCGCT---------------------------------------------------------------ACATGG---------GGCGTATACCCGATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLLVEVVAVLAL---A-KEVSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-SD---Q---------NTQ------VMY-GVLSTLPFIYILYVL-----F--V-ELGKSLERQ-----PAGV-A-E-T-V-G-RL-RLLLIA---------------------TW---GVYPI------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601728 [Actinorhodopsin] clone_25-7_KC601728 gi|523706450|gb|KC601728| Uncultured bacterium clone 25-7 actinorhodopsin gene, partial cds. Uncultured bacterium clone 25-7 actinorhodopsin gene, partial cds. KC601728 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 oligo-mesotrophic deep submontane freshwater lake other freshwater 47.82 13.38 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGGTACGTTGACTGGCTACTCACAGTGCCACTACTTCTAGTTGAAGTAGTTGCAGTGCTTGCATTAGCTAAGGAAGTTTCACGTTCCCTTATCACGCGCTTGGTCCCAGCATCTGCTGCGATGATCGCGCTTGGATACCCAGGTGAAATTTCAAGCGATCAGAACACACAGGTTATGTACGGTGTTCTATCAACACTTCCATTCATCTACATCCTTTACGTTCTATTCGTAGAACTAGGTAAGTCACTTGAGCGTCAACCAGCAGGAGTTGCAGACACCGTTGGTCGCTTGCGTCTTCTTTTGATTGCCACATGGGGCGTTTATCCAAT RYVDWLLTVPLLLVEVVAVLALAKEVSRSLITRLVPASAAMIALGYPGEISSDQNTQVMYGVLSTLPFIYILYVLFVELGKSLERQPAGVADTVGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTACGTTGACTGG------------------------CTACTCACAGTGCCACTACTTCTAGTTGAAGTAGTTGCAGTGCTTGCATTA---------GCT---AAGGAAGTTTCACGT---TCCCTT------------------------------------ATCACGCGC---TTGGTCCCAGCATCTGCTGCGATGATCGCGCTTGGATACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AGCGAT---------CAG---------------------------AACACACAG------------------GTTATGTAC---GGTGTTCTATCAACACTTCCATTCATCTACATCCTTTACGTTCTA---------------TTC------GTA---GAACTAGGTAAGTCACTTGAGCGTCAA---------------CCAGCAGGAGTT---GCA---GAC---ACC---GTT---GGT---CGCTTG---CGTCTTCTTTTGATTGCC---------------------------------------------------------------ACATGG---------GGCGTTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLLLVEVVAVLAL---A-KEVSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-SD---Q---------NTQ------VMY-GVLSTLPFIYILYVL-----F--V-ELGKSLERQ-----PAGV-A-D-T-V-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601741 [Actinorhodopsin] clone_27-8_KC601741 gi|523706476|gb|KC601741| Uncultured bacterium clone 27-8 actinorhodopsin gene, partial cds. Uncultured bacterium clone 27-8 actinorhodopsin gene, partial cds. KC601741 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 oligo-mesotrophic deep submontane freshwater lake other freshwater 47.82 13.38 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGGTACGTGGACTGGCTACTCACAGTGCCACTACTTCTAGTTGAAGTAGTTGCAGTGCTTGCATTAGCTAAGGAAGTTTCACGTTCCCTTATCACGCGCTTGGTCCCAGCATCTGCTGCGATGATCGCGCTTGGATACCCAGGTGAAATTTCAAGCGATCAGAACACACAGGTTATGTACGGTGTTCTATCAACACTTCCATTCATCTACATCCTTTACGTTCTATTCGTAGAACTAGGTAAGTCACTTGAGCGTCAACCAGCAGGAGTTGCAGACACCGTTGGTCGCTTGCGTCTTCTTTTGATTGCCACATGGGGCGCCTATCCCAT RYVDWLLTVPLLLVEVVAVLALAKEVSRSLITRLVPASAAMIALGYPGEISSDQNTQVMYGVLSTLPFIYILYVLFVELGKSLERQPAGVADTVGRLRLLLIATWGAYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTACGTGGACTGG------------------------CTACTCACAGTGCCACTACTTCTAGTTGAAGTAGTTGCAGTGCTTGCATTA---------GCT---AAGGAAGTTTCACGT---TCCCTT------------------------------------ATCACGCGC---TTGGTCCCAGCATCTGCTGCGATGATCGCGCTTGGATACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AGCGAT---------CAG---------------------------AACACACAG------------------GTTATGTAC---GGTGTTCTATCAACACTTCCATTCATCTACATCCTTTACGTTCTA---------------TTC------GTA---GAACTAGGTAAGTCACTTGAGCGTCAA---------------CCAGCAGGAGTT---GCA---GAC---ACC---GTT---GGT---CGCTTG---CGTCTTCTTTTGATTGCC---------------------------------------------------------------ACATGG---------GGCGCCTATCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLLLVEVVAVLAL---A-KEVSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-SD---Q---------NTQ------VMY-GVLSTLPFIYILYVL-----F--V-ELGKSLERQ-----PAGV-A-D-T-V-G-RL-RLLLIA---------------------TW---GAYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601751 [Actinorhodopsin] clone_9-3_KC601751 gi|523706496|gb|KC601751| Uncultured bacterium clone 9-3 actinorhodopsin gene, partial cds. Uncultured bacterium clone 9-3 actinorhodopsin gene, partial cds. KC601751 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 oligo-mesotrophic deep submontane freshwater lake other freshwater 47.82 13.38 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 AGGTACATAGACTGGCTACTCACAGTGCCACTACTTCTAGTTGAAGTAGTTGCAGTGCTTGCATTAGCTAAGGAAGTTTCACGTTCCCTTATCACGCGCTTGGTCCCAGCATCCGCTGCGATGATCGCGCTTGGATACCCAGGTGAAATTTCAAGCGATCAGAACACACAGGTTATGTACGGTGTTCTATCAACACTTCCATTCATCTACATCCTTTACGTTCTATTCGTAGAACTAGGTAAGTCACTTGAGCGTCAACCAGCAGGAGTTGCAGACACCGTTGGTCGCTTGCGTCTTCTTTTGATTGCCACATGGGGCGTCTACCCTAC RYIDWLLTVPLLLVEVVAVLALAKEVSRSLITRLVPASAAMIALGYPGEISSDQNTQVMYGVLSTLPFIYILYVLFVELGKSLERQPAGVADTVGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATAGACTGG------------------------CTACTCACAGTGCCACTACTTCTAGTTGAAGTAGTTGCAGTGCTTGCATTA---------GCT---AAGGAAGTTTCACGT---TCCCTT------------------------------------ATCACGCGC---TTGGTCCCAGCATCCGCTGCGATGATCGCGCTTGGATACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AGCGAT---------CAG---------------------------AACACACAG------------------GTTATGTAC---GGTGTTCTATCAACACTTCCATTCATCTACATCCTTTACGTTCTA---------------TTC------GTA---GAACTAGGTAAGTCACTTGAGCGTCAA---------------CCAGCAGGAGTT---GCA---GAC---ACC---GTT---GGT---CGCTTG---CGTCTTCTTTTGATTGCC---------------------------------------------------------------ACATGG---------GGCGTCTACCCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLLVEVVAVLAL---A-KEVSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-SD---Q---------NTQ------VMY-GVLSTLPFIYILYVL-----F--V-ELGKSLERQ-----PAGV-A-D-T-V-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601722 [Actinorhodopsin] clone_22-6_KC601722 gi|523706438|gb|KC601722| Uncultured bacterium clone 22-6 actinorhodopsin gene, partial cds. Uncultured bacterium clone 22-6 actinorhodopsin gene, partial cds. KC601722 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 oligo-mesotrophic deep submontane freshwater lake other freshwater 47.82 13.38 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGTTATGTCGACTGGCTACTCACAGTGCCACTACTTCTAGTTGAAGTAGTTGCAGTGCTTGCATTAGCTAAGGAAGTTTCACGTTCCCTTATCACGCGCTTGGTCCCAGCATCTGCTGCGATGATCGCGCTTGGATACCCAGGTGAAATTTCAAGCGATCAGAACACACAGGTTATGTACGGTGTTCTATCAACACTTCCATTCATCTACATCCTTTACGTTCTATTCGTAGAACTAGGTAAGTCACTTGAGCGTCAACCAGCAGGAGTTGCAGACACCGTTGGTCGCTTGCGTCTTCTTTTGATTGCCACATGGGGAGTCTACCCCAA RYVDWLLTVPLLLVEVVAVLALAKEVSRSLITRLVPASAAMIALGYPGEISSDQNTQVMYGVLSTLPFIYILYVLFVELGKSLERQPAGVADTVGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTATGTCGACTGG------------------------CTACTCACAGTGCCACTACTTCTAGTTGAAGTAGTTGCAGTGCTTGCATTA---------GCT---AAGGAAGTTTCACGT---TCCCTT------------------------------------ATCACGCGC---TTGGTCCCAGCATCTGCTGCGATGATCGCGCTTGGATACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AGCGAT---------CAG---------------------------AACACACAG------------------GTTATGTAC---GGTGTTCTATCAACACTTCCATTCATCTACATCCTTTACGTTCTA---------------TTC------GTA---GAACTAGGTAAGTCACTTGAGCGTCAA---------------CCAGCAGGAGTT---GCA---GAC---ACC---GTT---GGT---CGCTTG---CGTCTTCTTTTGATTGCC---------------------------------------------------------------ACATGG---------GGAGTCTACCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLLLVEVVAVLAL---A-KEVSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-SD---Q---------NTQ------VMY-GVLSTLPFIYILYVL-----F--V-ELGKSLERQ-----PAGV-A-D-T-V-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_FJ545155 [Actinorhodopsin] clone_Superior_LGR_E1_rhodopsin_gene_partial_cds_FJ545155 gi|224383985|gb|FJ545155| Uncultured microorganism clone Superior.LGR.E1 putative rhodopsin gene, partial cds. Uncultured microorganism clone Superior.LGR.E1 putative rhodopsin gene, partial cds. FJ545155 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juin-05 Lake Superior other freshwater 47.3 -91.67 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTACTCACAGTGCCACTACTTCTAGTTGAAGTAGTTGCAGTGCTTGCACTAGCTAAGGAAGTTTCACGTTCCCTCATCACGCGCTTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGATACCCAGGTGAAATTTCAACCGTTCAGAACACACAGGTTATGTACGGTGTTCTATCAACAATTCCATTCATTTACATCCTTTACGTTCTATTCGTAGAACTAGGTAAGTCACTTGAGCGTCAACCAGCAGGAGTTGCAGAGACCGTTGGTCGCTTGCGTCTTCTATTGATTGCGACA LLTVPLLLVEVVAVLALAKEVSRSLITRLVPASAAMIALGYPGEISTVQNTQVMYGVLSTIPFIYILYVLFVELGKSLERQPAGVAETVGRLRLLLIAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTCACAGTGCCACTACTTCTAGTTGAAGTAGTTGCAGTGCTTGCACTA---------GCT---AAGGAAGTTTCACGT---TCCCTC------------------------------------ATCACGCGC---TTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGATACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---ACCGTT---------CAG---------------------------AACACACAG------------------GTTATGTAC---GGTGTTCTATCAACAATTCCATTCATTTACATCCTTTACGTTCTA---------------TTC------GTA---GAACTAGGTAAGTCACTTGAGCGTCAA---------------CCAGCAGGAGTT---GCA---GAG---ACC---GTT---GGT---CGCTTG---CGTCTTCTATTGATTGCG---------------------------------------------------------------ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLLVEVVAVLAL---A-KEVSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-TV---Q---------NTQ------VMY-GVLSTIPFIYILYVL-----F--V-ELGKSLERQ-----PAGV-A-E-T-V-G-RL-RLLLIA---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_FJ545144 [Actinorhodopsin] clone_Superior_LG_H1_rhodopsin_gene_partial_cds_FJ545144 gi|224383963|gb|FJ545144| Uncultured microorganism clone Superior.LG.H1 putative rhodopsin gene, partial cds. Uncultured microorganism clone Superior.LG.H1 putative rhodopsin gene, partial cds. FJ545144 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juin-05 Lake Superior other freshwater 47.3 -91.67 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTACTCACAGTGCCACTACTTCTAGTTGAAGTAGTTGCAGTGCTTGCACTAGCTAAGGAAGTTTCACGTTCCCTCATCACGCGCTTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGATACCCAGGTGAAATTTCAACCGTTCAGAACACACAGGTTATGTACGGTGTTCTATCAACAATTCCATTCATTTACATCCTTTACGTTCTATTCGTAGAACTAGGTAAGTCACTTGAGCGTCAACCAGCAGGAGTTGCAGAGACCGTTGGTCGCTTGCGTCCTCTATTGATTGCGACA LLTVPLLLVEVVAVLALAKEVSRSLITRLVPASAAMIALGYPGEISTVQNTQVMYGVLSTIPFIYILYVLFVELGKSLERQPAGVAETVGRLRPLLIAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTCACAGTGCCACTACTTCTAGTTGAAGTAGTTGCAGTGCTTGCACTA---------GCT---AAGGAAGTTTCACGT---TCCCTC------------------------------------ATCACGCGC---TTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGATACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---ACCGTT---------CAG---------------------------AACACACAG------------------GTTATGTAC---GGTGTTCTATCAACAATTCCATTCATTTACATCCTTTACGTTCTA---------------TTC------GTA---GAACTAGGTAAGTCACTTGAGCGTCAA---------------CCAGCAGGAGTT---GCA---GAG---ACC---GTT---GGT---CGCTTG---CGTCCTCTATTGATTGCG---------------------------------------------------------------ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLLVEVVAVLAL---A-KEVSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-TV---Q---------NTQ------VMY-GVLSTIPFIYILYVL-----F--V-ELGKSLERQ-----PAGV-A-E-T-V-G-RL-RPLLIA---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_FJ545177 [Actinorhodopsin] clone_Erie_LG_G1_rhodopsin_gene_partial_cds_FJ545177 gi|224384029|gb|FJ545177| Uncultured microorganism clone Erie.LG.G1 putative rhodopsin gene, partial cds. Uncultured microorganism clone Erie.LG.G1 putative rhodopsin gene, partial cds. FJ545177 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juil-05 Lake Erie other freshwater 41.9461 -81.6461 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTACTCACAGTACCTCTACTTCTTGTTGAAGTAATTGCAGTACTTGCATTAGCTAAGGAAGTTTCACGTTCCCTCATCACGCGCTTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGATACCCAGGTGAAATTTCAAACGATCAGAACACACAGGTTCTATACGGTGTTCTATCAACACTTCCATTCATCTACATCCTTTACGTTCTATTCGTAGAACTAGGTAAGTCACTTGAACGTCAACCAGCAGGAGTTGCAGAGACCGTTGGTCGTTTGCGTCTTCTATTGATCGCTACA LLTVPLLLVEVIAVLALAKEVSRSLITRLVPASAAMIALGYPGEISNDQNTQVLYGVLSTLPFIYILYVLFVELGKSLERQPAGVAETVGRLRLLLIAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTCACAGTACCTCTACTTCTTGTTGAAGTAATTGCAGTACTTGCATTA---------GCT---AAGGAAGTTTCACGT---TCCCTC------------------------------------ATCACGCGC---TTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGATACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AACGAT---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGTGTTCTATCAACACTTCCATTCATCTACATCCTTTACGTTCTA---------------TTC------GTA---GAACTAGGTAAGTCACTTGAACGTCAA---------------CCAGCAGGAGTT---GCA---GAG---ACC---GTT---GGT---CGTTTG---CGTCTTCTATTGATCGCT---------------------------------------------------------------ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------VLY-GVLSTLPFIYILYVL-----F--V-ELGKSLERQ-----PAGV-A-E-T-V-G-RL-RLLLIA---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663802 [Actinorhodopsin] SCGC_AAA044D18_Actinobacteria_HQ663802 gi|325163201|gb|HQ663802| Actinobacterium SCGC AAA044D18 rhodopsin gene, partial cds Actinobacterium SCGC AAA044D18 rhodopsin gene, partial cds HQ663802 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938520 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) GTGGATTGGCTACTTACAGTGCCACTACTTCTTGTTGAAGTAATTGCAGTACTTGCACTAGCCAAGGAAGTTTCACGTTCCCTCATCATGCGTTTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGTTACCCAGGTGAAATTTCAAACGATCAGAACACACAGGTTCTATACGGTGTTCTATCAACACTTCCTTTCCTATACATCCTTTACGTACTGTTCGTAGAGCTTGGAAAGTCACTTGATCGTCAACCAGCAGGAGTTGCAGAGACCGTTGGTCGCTTGCGTCTTCTTTTGATCGCGACATGGGGCGTCTACCCGATGGTCATA VDWLLTVPLLLVEVIAVLALAKEVSRSLIMRLVPASAAMIALGYPGEISNDQNTQVLYGVLSTLPFLYILYVLFVELGKSLDRQPAGVAETVGRLRLLLIATWGVYPMVI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGGATTGG------------------------CTACTTACAGTGCCACTACTTCTTGTTGAAGTAATTGCAGTACTTGCACTA---------GCC---AAGGAAGTTTCACGT---TCCCTC------------------------------------ATCATGCGT---TTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AACGAT---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGTGTTCTATCAACACTTCCTTTCCTATACATCCTTTACGTACTG---------------TTC------GTA---GAGCTTGGAAAGTCACTTGATCGTCAA---------------CCAGCAGGAGTT---GCA---GAG---ACC---GTT---GGT---CGCTTG---CGTCTTCTTTTGATCGCG---------------------------------------------------------------ACATGG---------GGCGTCTACCCGATGGTCATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------IMR-LVPASAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------VLY-GVLSTLPFLYILYVL-----F--V-ELGKSLDRQ-----PAGV-A-E-T-V-G-RL-RLLLIA---------------------TW---GVYPMVI----------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663806 [Actinorhodopsin] SCGC_AAA044L11_Actinobacteria_HQ663806 gi|325163209|gb|HQ663806| Actinobacterium SCGC AAA044L11 rhodopsin gene, partial cds Actinobacterium SCGC AAA044L11 rhodopsin gene, partial cds HQ663806 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938530 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) GTAGATTGGCTACTTACAGTGCCACTACTTCTTGTTGAAGTAATTGCAGTACTTGCACTAGCCAAGGAAGTTTCACGTTCCCTCATCATGCGTTTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGTTACCCAGGTGAAATTTCAAACGATCAGAACACACAGGTTCTATACGGTGTTCTATCAACACTTCCTTTCCTATACATCCTTTACGTACTGTTCGTAGAGCTTGGAAAGTCACTTGATCGTCAACCAGCAGGAGTTGCAGAGACCGTTGGTCGCTTGCGTCTTCTTTTGATCGCGACATGGGGCGTCTACCCGATGGTCATA VDWLLTVPLLLVEVIAVLALAKEVSRSLIMRLVPASAAMIALGYPGEISNDQNTQVLYGVLSTLPFLYILYVLFVELGKSLDRQPAGVAETVGRLRLLLIATWGVYPMVI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGATTGG------------------------CTACTTACAGTGCCACTACTTCTTGTTGAAGTAATTGCAGTACTTGCACTA---------GCC---AAGGAAGTTTCACGT---TCCCTC------------------------------------ATCATGCGT---TTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AACGAT---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGTGTTCTATCAACACTTCCTTTCCTATACATCCTTTACGTACTG---------------TTC------GTA---GAGCTTGGAAAGTCACTTGATCGTCAA---------------CCAGCAGGAGTT---GCA---GAG---ACC---GTT---GGT---CGCTTG---CGTCTTCTTTTGATCGCG---------------------------------------------------------------ACATGG---------GGCGTCTACCCGATGGTCATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------IMR-LVPASAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------VLY-GVLSTLPFLYILYVL-----F--V-ELGKSLDRQ-----PAGV-A-E-T-V-G-RL-RLLLIA---------------------TW---GVYPMVI----------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663807 [Actinorhodopsin] SCGC_AAA044L23_Actinobacteria_HQ663807 gi|325163211|gb|HQ663807| Actinobacterium SCGC AAA044L23 rhodopsin gene, partial cds Actinobacterium SCGC AAA044L23 rhodopsin gene, partial cds HQ663807 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938531 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) GTAGATTGGCTACTTACAGTGCCACTACTTCTTGTTGAAGTAATTGCAGTACTTGCACTAGCCAAGGAAGTTTCACGTTCCCTCATCATGCGTTTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGTTACCCAGGTGAAATTTCAAACGATCAGAACACACAGGTTCTATACGGTGTTCTATCAACACTTCCTTTCCTATACATCCTTTACGTACTGTTCGTAGAGCTTGGAAAGTCACTTGATCGTCAACCAGCAGGAGTTGCAGAGACCGTTGGTCGCTTGCGTCTTCTTTTGATCGCGACATGGGGCGTCTACCCGATGGTC VDWLLTVPLLLVEVIAVLALAKEVSRSLIMRLVPASAAMIALGYPGEISNDQNTQVLYGVLSTLPFLYILYVLFVELGKSLDRQPAGVAETVGRLRLLLIATWGVYPMV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGATTGG------------------------CTACTTACAGTGCCACTACTTCTTGTTGAAGTAATTGCAGTACTTGCACTA---------GCC---AAGGAAGTTTCACGT---TCCCTC------------------------------------ATCATGCGT---TTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AACGAT---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGTGTTCTATCAACACTTCCTTTCCTATACATCCTTTACGTACTG---------------TTC------GTA---GAGCTTGGAAAGTCACTTGATCGTCAA---------------CCAGCAGGAGTT---GCA---GAG---ACC---GTT---GGT---CGCTTG---CGTCTTCTTTTGATCGCG---------------------------------------------------------------ACATGG---------GGCGTCTACCCGATGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------IMR-LVPASAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------VLY-GVLSTLPFLYILYVL-----F--V-ELGKSLDRQ-----PAGV-A-E-T-V-G-RL-RLLLIA---------------------TW---GVYPMV------------------------------------------------------------------------------------------------ [Actinorhodopsin]_HQ663797 [Actinorhodopsin] SCGC_AAA044C19_Actinobacteria_HQ663797 gi|325163192|gb|HQ663797| Actinobacterium SCGC AAA044C19 rhodopsin gene, partial cds Actinobacterium SCGC AAA044C19 rhodopsin gene, partial cds HQ663797 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938515 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTTGATTGGCTACTTACAGTGCCACTACTTCTTGTTGAAGTAATTGCAGTACTTGCACTAGCCAAGGAAGTTTCACGTTCCCTCATCATGCGTTTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGTTACCCAGGTGAAATTTCAAACGATCAGAACACACAGGTTCTATACGGTGTTCTATCAACACTTCCTTTCCTATACATCCTTTACGTACTGTTCGTAGAGCTTGGAAAGTCACTTGATCGTCAACCAGCAGGAGTTGCAGAGACCGTTGGTCGCTTGCGTCTTCTTTTGATCGCGACATGGGGCGTCTACCCGATGGTC YVDWLLTVPLLLVEVIAVLALAKEVSRSLIMRLVPASAAMIALGYPGEISNDQNTQVLYGVLSTLPFLYILYVLFVELGKSLDRQPAGVAETVGRLRLLLIATWGVYPMV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTTGATTGG------------------------CTACTTACAGTGCCACTACTTCTTGTTGAAGTAATTGCAGTACTTGCACTA---------GCC---AAGGAAGTTTCACGT---TCCCTC------------------------------------ATCATGCGT---TTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AACGAT---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGTGTTCTATCAACACTTCCTTTCCTATACATCCTTTACGTACTG---------------TTC------GTA---GAGCTTGGAAAGTCACTTGATCGTCAA---------------CCAGCAGGAGTT---GCA---GAG---ACC---GTT---GGT---CGCTTG---CGTCTTCTTTTGATCGCG---------------------------------------------------------------ACATGG---------GGCGTCTACCCGATGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------IMR-LVPASAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------VLY-GVLSTLPFLYILYVL-----F--V-ELGKSLDRQ-----PAGV-A-E-T-V-G-RL-RLLLIA---------------------TW---GVYPMV------------------------------------------------------------------------------------------------ [Actinorhodopsin]_HQ663783 [Actinorhodopsin] SCGC_AAA043D21_Actinobacteria_HQ663783 gi|325163165|gb|HQ663783| Actinobacterium SCGC AAA043D21 rhodopsin gene, partial cds Actinobacterium SCGC AAA043D21 rhodopsin gene, partial cds HQ663783 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938488 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) GTTGATTGGCTACTTACAGTGCCACTACTTCTTGTTGAAGTAATTGCAGTACTTGCACTAGCCAAGGAAGTTTCACGTTCCCTCATCATGCGTTTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGTTACCCAGGTGAAATTTCAAACGATCAGAACACACAGGTTCTATACGGTGTTCTATCAACACTTCCTTTCCTATACATCCTTTACGTACTGTTCGTAGAGCTTGGAAAGTCACTTGATCGTCAACCAGCAGGAGTTGCAGAGACCGTTGGTCGCTTGCGTCTTCTTTTGATCGCGACATGGGGTGTCTACCCGATGGTC VDWLLTVPLLLVEVIAVLALAKEVSRSLIMRLVPASAAMIALGYPGEISNDQNTQVLYGVLSTLPFLYILYVLFVELGKSLDRQPAGVAETVGRLRLLLIATWGVYPMV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGATTGG------------------------CTACTTACAGTGCCACTACTTCTTGTTGAAGTAATTGCAGTACTTGCACTA---------GCC---AAGGAAGTTTCACGT---TCCCTC------------------------------------ATCATGCGT---TTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AACGAT---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGTGTTCTATCAACACTTCCTTTCCTATACATCCTTTACGTACTG---------------TTC------GTA---GAGCTTGGAAAGTCACTTGATCGTCAA---------------CCAGCAGGAGTT---GCA---GAG---ACC---GTT---GGT---CGCTTG---CGTCTTCTTTTGATCGCG---------------------------------------------------------------ACATGG---------GGTGTCTACCCGATGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------IMR-LVPASAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------VLY-GVLSTLPFLYILYVL-----F--V-ELGKSLDRQ-----PAGV-A-E-T-V-G-RL-RLLLIA---------------------TW---GVYPMV------------------------------------------------------------------------------------------------ [Actinorhodopsin]_HQ663778 [Actinorhodopsin] SCGC_AAA041N02_Actinobacteria_HQ663778 gi|325163155|gb|HQ663778| Actinobacterium SCGC AAA041N02 rhodopsin gene, partial cds Actinobacterium SCGC AAA041N02 rhodopsin gene, partial cds HQ663778 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938482 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTAGATTGGCTGCTCACAGTGCCACTACTTCTTGTTGAAGTAATTGCAGTACTTGCACTAGCCAAGGAAGTTTCACGTTCCCTCATCATGCGTTTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGTTACCCAGGTGAAATTTCAAACGATCAGAACACACAGGTTCTATACGGTGTTCTATCAACACTTCCTTTCCTATACATCCTTTACGTACTGTTCGTAGAGCTTGGAAAGTCACTTGATCGTCAACCAGCAGGAGTTGCAGAGACCGTTGGTCGCTTGCGTCTTCTTTTGATCGCGTACATG YVDWLLTVPLLLVEVIAVLALAKEVSRSLIMRLVPASAAMIALGYPGEISNDQNTQVLYGVLSTLPFLYILYVLFVELGKSLDRQPAGVAETVGRLRLLLIAYM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTAGATTGG------------------------CTGCTCACAGTGCCACTACTTCTTGTTGAAGTAATTGCAGTACTTGCACTA---------GCC---AAGGAAGTTTCACGT---TCCCTC------------------------------------ATCATGCGT---TTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AACGAT---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGTGTTCTATCAACACTTCCTTTCCTATACATCCTTTACGTACTG---------------TTC------GTA---GAGCTTGGAAAGTCACTTGATCGTCAA---------------CCAGCAGGAGTT---GCA---GAG---ACC---GTT---GGT---CGCTTG---CGTCTTCTTTTGATCGCG---------------------------------------------------------------TACATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------IMR-LVPASAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------VLY-GVLSTLPFLYILYVL-----F--V-ELGKSLDRQ-----PAGV-A-E-T-V-G-RL-RLLLIA---------------------YM--------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HF571299 [Actinorhodopsin] clone_BSActR_OTU7_HF571299 gi|528066059|gb|HF571299| Uncultured bacterium partial actR gene for Actinorhodopsin, clone BSActR OTU7. Uncultured bacterium partial actR gene for Actinorhodopsin, clone BSActR OTU7. HF571299 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-juil-13 #na brackish water Baltic Sea marine 57.8 20 Distribution of acI-Actinorhodopsin genes in Baltic Sea salinity gradients indicates the success of facultative freshwater photoheterotrophs in brackish waters Salka,I., Wurzbacher,C., Garcia,S.L., Labrenz,M., Juergens,K. and Grossart,H.P. Unpublished #na #na TATCGGTATGCTGACTGGTTGCTTACAGTGCCACTACTTCTAGTTGAAGTAATCGCTGTACTTGCACTAGCCAAAGAAGTTTCACGTTCCCTCATCATGCGCTTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGATACCCAGGTGAAGTTTCAAACGATCAGAACACACAGGTTATGTTCGGTGTTCTATCAACACTTCCTTTCCTATACATCCTTTACGTACTGTTCGTAGAGCTTGGTAAGTCACTTGATCGTCAACCAGCAGGAGTTGCAGAGACCGTTGGTCGCTTGCGTCTTCTATTGATTGTGACATGGGGCGTCTATCCAATA YRYADWLLTVPLLLVEVIAVLALAKEVSRSLIMRLVPASAAMIALGYPGEVSNDQNTQVMFGVLSTLPFLYILYVLFVELGKSLDRQPAGVAETVGRLRLLLIVTWGVYPI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCGGTATGCTGACTGG------------------------TTGCTTACAGTGCCACTACTTCTAGTTGAAGTAATCGCTGTACTTGCACTA---------GCC---AAAGAAGTTTCACGT---TCCCTC------------------------------------ATCATGCGC---TTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGATACCCAGGTGAA---------GTT------------------------------------------------------------------------------TCA---AACGAT---------CAG---------------------------AACACACAG------------------GTTATGTTC---GGTGTTCTATCAACACTTCCTTTCCTATACATCCTTTACGTACTG---------------TTC------GTA---GAGCTTGGTAAGTCACTTGATCGTCAA---------------CCAGCAGGAGTT---GCA---GAG---ACC---GTT---GGT---CGCTTG---CGTCTTCTATTGATTGTG---------------------------------------------------------------ACATGG---------GGCGTCTATCCAATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYADW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------IMR-LVPASAAMIALGYPGE---V--------------------------S-ND---Q---------NTQ------VMF-GVLSTLPFLYILYVL-----F--V-ELGKSLDRQ-----PAGV-A-E-T-V-G-RL-RLLLIV---------------------TW---GVYPI------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601730 [Actinorhodopsin] clone_26-1_KC601730 gi|523706454|gb|KC601730| Uncultured bacterium clone 26-1 actinorhodopsin gene, partial cds. Uncultured bacterium clone 26-1 actinorhodopsin gene, partial cds. KC601730 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 oligo-mesotrophic deep submontane freshwater lake other freshwater 47.82 13.38 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGGTATGTGGACTGGCTACTAACTGTTCCACTACTTCTAGTAGAGGTAATTGCTGTACTTGCTCTAACTCGCGAAGTTTCTCGCTCACTAATCATGCGTCTTGTCCCAGCTTCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAAATTTCAAATGATCAGAACACCCAGGTTCTATACGGTGTTCTATCAACAATCCCATTCCTATACATCCTTTACGTACTATTCGTAGAGCTTGGCAAGTCATTGGATCGCCAGCCAGCTGGTGTTGCAGAGACTGTAGGACGTTTGCGTCTACTACTTATCGCAACATGGGGCGTCTACCCCAT RYVDWLLTVPLLLVEVIAVLALTREVSRSLIMRLVPASAAMIALGYPGEISNDQNTQVLYGVLSTIPFLYILYVLFVELGKSLDRQPAGVAETVGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTATGTGGACTGG------------------------CTACTAACTGTTCCACTACTTCTAGTAGAGGTAATTGCTGTACTTGCTCTA---------ACT---CGCGAAGTTTCTCGC---TCACTA------------------------------------ATCATGCGT---CTTGTCCCAGCTTCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AATGAT---------CAG---------------------------AACACCCAG------------------GTTCTATAC---GGTGTTCTATCAACAATCCCATTCCTATACATCCTTTACGTACTA---------------TTC------GTA---GAGCTTGGCAAGTCATTGGATCGCCAG---------------CCAGCTGGTGTT---GCA---GAG---ACT---GTA---GGA---CGTTTG---CGTCTACTACTTATCGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLLLVEVIAVLAL---T-REVSR-SL------------IMR-LVPASAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------VLY-GVLSTIPFLYILYVL-----F--V-ELGKSLDRQ-----PAGV-A-E-T-V-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HE646817 [Actinorhodopsin] clone_QitNWEx2_HE646817 gi|363805800|gb|HE646817| Uncultured bacterium partial actR gene for Actinorhodopsin, clone QitNWEx2. Uncultured bacterium partial actR gene for Actinorhodopsin, clone QitNWEx2. HE646817 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 19-nov-12 2010 Lake Stechlin surface water other freshwater 53.17 13.03 Environmental actinorhodopsin expression revealed by a new in situ filtration and fixation sampler Wurzbacher,C., Salka,I. and Grossart,H.P. Environ Microbiol Rep 4 (5), 491-497 (2012) 23760893 acI-like TACCGTTATGTTGATTGGCTACTAACTGTTCCACTACTTCTAGTAGAGGTTATTGCTGTACTTGCTCTAACTCGCGAAGTTTCTCGCTCACTAATCGTGCGTCTTGTCCCAGCTTCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAAATTTCAAATGATCAGAACACCCAGGTTCTATACGGTGTTCTATCAACAATCCCATTCCTATACATCCTTTACGTACTATTCGTAGAGCTTGGCAAGTCATTGGATCGCCAGCCAGCTGGTGTTGCAGAGACTGTAGGACGTTTGCGTCTACTACTTATCGCAACATGGGGCGA YRYVDWLLTVPLLLVEVIAVLALTREVSRSLIVRLVPASAAMIALGYPGEISNDQNTQVLYGVLSTIPFLYILYVLFVELGKSLDRQPAGVAETVGRLRLLLIATWG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCGTTATGTTGATTGG------------------------CTACTAACTGTTCCACTACTTCTAGTAGAGGTTATTGCTGTACTTGCTCTA---------ACT---CGCGAAGTTTCTCGC---TCACTA------------------------------------ATCGTGCGT---CTTGTCCCAGCTTCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AATGAT---------CAG---------------------------AACACCCAG------------------GTTCTATAC---GGTGTTCTATCAACAATCCCATTCCTATACATCCTTTACGTACTA---------------TTC------GTA---GAGCTTGGCAAGTCATTGGATCGCCAG---------------CCAGCTGGTGTT---GCA---GAG---ACT---GTA---GGA---CGTTTG---CGTCTACTACTTATCGCA---------------------------------------------------------------ACATGG---------GGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYVDW--------LLTVPLLLVEVIAVLAL---T-REVSR-SL------------IVR-LVPASAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------VLY-GVLSTIPFLYILYVL-----F--V-ELGKSLDRQ-----PAGV-A-E-T-V-G-RL-RLLLIA---------------------TW---G----------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HE646858 [Actinorhodopsin] clone_QixNWEx2_HE646858 gi|363805882|gb|HE646858| Uncultured bacterium partial actR gene for Actinorhodopsin, clone QixNWEx2. Uncultured bacterium partial actR gene for Actinorhodopsin, clone QixNWEx2. HE646858 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 19-nov-12 2010 Lake Stechlin surface water other freshwater 53.17 13.03 Environmental actinorhodopsin expression revealed by a new in situ filtration and fixation sampler Wurzbacher,C., Salka,I. and Grossart,H.P. Environ Microbiol Rep 4 (5), 491-497 (2012) 23760893 acI-like TATCGGTATGTGGACTGGCTTCTAACTGTGCCGCTACTACTAGTAGAAGTAGTTGCTGTACTTGCTCTAACTAGCGAAGTTTCTCGCTCACTAATCATGCGTCTAGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGTTACCCAGGTGAGATTTCAAGCGATCAGAACACCCAGGTTCTTTACGGTGTTCTATCAACAATCCCATTCCTATACATCCTTTACGTACTATTCGTAGAGCTTGGCAAGTCATTGGATCGCCAGCCAGCTGGTGTTGCAGAGACTGTAGGCCGTTTGCGTCTGCTTCTTATTGCAACATGGGGCGTCTAACCTATA YRYVDWLLTVPLLLVEVVAVLALTSEVSRSLIMRLVPASAAMIALGYPGEISSDQNTQVLYGVLSTIPFLYILYVLFVELGKSLDRQPAGVAETVGRLRLLLIATWGV*PI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCGGTATGTGGACTGG------------------------CTTCTAACTGTGCCGCTACTACTAGTAGAAGTAGTTGCTGTACTTGCTCTA---------ACT---AGCGAAGTTTCTCGC---TCACTA------------------------------------ATCATGCGT---CTAGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCA---AGCGAT---------CAG---------------------------AACACCCAG------------------GTTCTTTAC---GGTGTTCTATCAACAATCCCATTCCTATACATCCTTTACGTACTA---------------TTC------GTA---GAGCTTGGCAAGTCATTGGATCGCCAG---------------CCAGCTGGTGTT---GCA---GAG---ACT---GTA---GGC---CGTTTG---CGTCTGCTTCTTATTGCA---------------------------------------------------------------ACATGG---------GGCGTC---TAACCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYVDW--------LLTVPLLLVEVVAVLAL---T-SEVSR-SL------------IMR-LVPASAAMIALGYPGE---I--------------------------S-SD---Q---------NTQ------VLY-GVLSTIPFLYILYVL-----F--V-ELGKSLDRQ-----PAGV-A-E-T-V-G-RL-RLLLIA---------------------TW---GV-*P------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663759 [Actinorhodopsin] SCGC_AAA028E20_Actinobacteria_HQ663759 gi|325163117|gb|HQ663759| Actinobacterium SCGC AAA028E20 rhodopsin gene, partial cds Actinobacterium SCGC AAA028E20 rhodopsin gene, partial cds HQ663759 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938450 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Mendota other freshwater 46.0095 -89.7006 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) CTACTAACTGTGCCACTACTACTAGTAGAGGTAATTGCAGTACTAGCTCTAACTCGCGAAGTTTCACGCTCACTAATCATGCGTCTGGTCCCGGCTTCAGCTGCGATGATCGCGCTTGGATACCCAGGTGAGATTTCAAACGATCAGAACACACAGGTTCTTTACGGTGTTCTATCAACACTTCCATTCCTATACATCCTTTACGTTCTATTCGTAGAACTAGGAAAGTCATTGGATCGCCAGCCAGCTGGTGTTGCAGAGACTGTAGGCCGTTTGCGTCTACTTCTTATCGCAACATGGGGCGTCTACCCGATGGTC LLTVPLLLVEVIAVLALTREVSRSLIMRLVPASAAMIALGYPGEISNDQNTQVLYGVLSTLPFLYILYVLFVELGKSLDRQPAGVAETVGRLRLLLIATWGVYPMV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTAACTGTGCCACTACTACTAGTAGAGGTAATTGCAGTACTAGCTCTA---------ACT---CGCGAAGTTTCACGC---TCACTA------------------------------------ATCATGCGT---CTGGTCCCGGCTTCAGCTGCGATGATCGCGCTTGGATACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCA---AACGAT---------CAG---------------------------AACACACAG------------------GTTCTTTAC---GGTGTTCTATCAACACTTCCATTCCTATACATCCTTTACGTTCTA---------------TTC------GTA---GAACTAGGAAAGTCATTGGATCGCCAG---------------CCAGCTGGTGTT---GCA---GAG---ACT---GTA---GGC---CGTTTG---CGTCTACTTCTTATCGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCGATGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLLVEVIAVLAL---T-REVSR-SL------------IMR-LVPASAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------VLY-GVLSTLPFLYILYVL-----F--V-ELGKSLDRQ-----PAGV-A-E-T-V-G-RL-RLLLIA---------------------TW---GVYPMV------------------------------------------------------------------------------------------------ [Actinorhodopsin]_HE646851 [Actinorhodopsin] clone_QiwNWEx4_HE646851 gi|363805868|gb|HE646851| Uncultured bacterium partial actR gene for Actinorhodopsin, clone QiwNWEx4. Uncultured bacterium partial actR gene for Actinorhodopsin, clone QiwNWEx4. HE646851 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 19-nov-12 2010 Lake Stechlin surface water other freshwater 53.17 13.03 Environmental actinorhodopsin expression revealed by a new in situ filtration and fixation sampler Wurzbacher,C., Salka,I. and Grossart,H.P. Environ Microbiol Rep 4 (5), 491-497 (2012) 23760893 acI-like TACCGTTATGCTGACTGGCTACTAACTGTGCCACTACTACTAGTAGAGGTAATTGCAGTACTTGCCCTAACACGCGAAGTTTCACGCTCACTGATCATGCGTTTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGTTACCCAGGTGAGATTTCAAACGATCAGAACACACAAGTTCTATACGGTGTTCTATCAACACTTCCATTCCTATACATCCTTTACGTTCTATTCGTAGAACTAGGAAAGTCATTGGATCGCCAGCCAGCTGGTGTTGCAGAGACTGTAGGCCGTTTGCGTCTACTTCTTATCGCAACATGGGGCGTGTATCCCATA YRYADWLLTVPLLLVEVIAVLALTREVSRSLIMRLVPASAAMIALGYPGEISNDQNTQVLYGVLSTLPFLYILYVLFVELGKSLDRQPAGVAETVGRLRLLLIATWGVYPI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCGTTATGCTGACTGG------------------------CTACTAACTGTGCCACTACTACTAGTAGAGGTAATTGCAGTACTTGCCCTA---------ACA---CGCGAAGTTTCACGC---TCACTG------------------------------------ATCATGCGT---TTGGTCCCAGCTTCAGCTGCGATGATCGCGCTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCA---AACGAT---------CAG---------------------------AACACACAA------------------GTTCTATAC---GGTGTTCTATCAACACTTCCATTCCTATACATCCTTTACGTTCTA---------------TTC------GTA---GAACTAGGAAAGTCATTGGATCGCCAG---------------CCAGCTGGTGTT---GCA---GAG---ACT---GTA---GGC---CGTTTG---CGTCTACTTCTTATCGCA---------------------------------------------------------------ACATGG---------GGCGTGTATCCCATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYADW--------LLTVPLLLVEVIAVLAL---T-REVSR-SL------------IMR-LVPASAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------VLY-GVLSTLPFLYILYVL-----F--V-ELGKSLDRQ-----PAGV-A-E-T-V-G-RL-RLLLIA---------------------TW---GVYPI------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601707 [Actinorhodopsin] clone_2-1_KC601707 gi|523706408|gb|KC601707| Uncultured bacterium clone 2-1 actinorhodopsin gene, partial cds. Uncultured bacterium clone 2-1 actinorhodopsin gene, partial cds. KC601707 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 humic freshwater reservoir other freshwater 48.6158 14.6762 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGTTACGTGGACTGGCTACTAACTGTGCCTCTACTACTAGTAGAAGTAATTGCAGTACTAGCACTAGCTAAGGAAGCTTCTCGCTCACTAATTATGCGTTTGGTCCCAGCATCAGCTGCGATGATCGCGCTTGGTTACCCAGGTGAAATTTCAAATGATCAGAACACACAGGTTCTATACGGTGTTCTATCAACAATTCCATTCTTGTACATCATGTACGTATTGTTCGTAGAGCTAGGTAAGTCACTAGATCGTCAGCCAGAAGGTGTTGCAGCGACAATTGGTCGCTTGCGTCTACTTCTAGTTGCGACATGGGGCGTCTACCCCAT RYVDWLLTVPLLLVEVIAVLALAKEASRSLIMRLVPASAAMIALGYPGEISNDQNTQVLYGVLSTIPFLYIMYVLFVELGKSLDRQPEGVAATIGRLRLLLVATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTACGTGGACTGG------------------------CTACTAACTGTGCCTCTACTACTAGTAGAAGTAATTGCAGTACTAGCACTA---------GCT---AAGGAAGCTTCTCGC---TCACTA------------------------------------ATTATGCGT---TTGGTCCCAGCATCAGCTGCGATGATCGCGCTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AATGAT---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGTGTTCTATCAACAATTCCATTCTTGTACATCATGTACGTATTG---------------TTC------GTA---GAGCTAGGTAAGTCACTAGATCGTCAG---------------CCAGAAGGTGTT---GCA---GCG---ACA---ATT---GGT---CGCTTG---CGTCTACTTCTAGTTGCG---------------------------------------------------------------ACATGG---------GGCGTCTACCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLLLVEVIAVLAL---A-KEASR-SL------------IMR-LVPASAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------VLY-GVLSTIPFLYIMYVL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-I-G-RL-RLLLVA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601708 [Actinorhodopsin] clone_2-2_KC601708 gi|523706410|gb|KC601708| Uncultured bacterium clone 2-2 actinorhodopsin gene, partial cds. Uncultured bacterium clone 2-2 actinorhodopsin gene, partial cds. KC601708 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 humic freshwater reservoir other freshwater 48.6158 14.6762 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGTTACGTGGACTGGCTACTAACTGTGCCTCTACTACTAGTAGAAGTAATTGCAGTACTAGCACTAGCTAAGGAAGTTTCTCGCTCACTAATTATGCGTTTGGTCCCAGCATCAGCTGCGATGATCGCGCTTGGTTACCCAGGTGAAATTTCAAATGATCAGAACACACAGGTTCTATACGGTGTTCTATCAACAATTCCATTCTTGTACATCCTGTACGTATTGTTCGTAGAGCTAGGTAAGTCACTAGATCGTCAGCCAGAAGGTGTTGCAGCGACAATTGGTCGCTTGCGTCTACTTCTAGTTGCGACATGGGGAGTCTACCCCAT RYVDWLLTVPLLLVEVIAVLALAKEVSRSLIMRLVPASAAMIALGYPGEISNDQNTQVLYGVLSTIPFLYILYVLFVELGKSLDRQPEGVAATIGRLRLLLVATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTACGTGGACTGG------------------------CTACTAACTGTGCCTCTACTACTAGTAGAAGTAATTGCAGTACTAGCACTA---------GCT---AAGGAAGTTTCTCGC---TCACTA------------------------------------ATTATGCGT---TTGGTCCCAGCATCAGCTGCGATGATCGCGCTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AATGAT---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGTGTTCTATCAACAATTCCATTCTTGTACATCCTGTACGTATTG---------------TTC------GTA---GAGCTAGGTAAGTCACTAGATCGTCAG---------------CCAGAAGGTGTT---GCA---GCG---ACA---ATT---GGT---CGCTTG---CGTCTACTTCTAGTTGCG---------------------------------------------------------------ACATGG---------GGAGTCTACCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------IMR-LVPASAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------VLY-GVLSTIPFLYILYVL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-I-G-RL-RLLLVA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601691 [Actinorhodopsin] clone_16-5_KC601691 gi|523706376|gb|KC601691| Uncultured bacterium clone 16-5 actinorhodopsin gene, partial cds. Uncultured bacterium clone 16-5 actinorhodopsin gene, partial cds. KC601691 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 humic freshwater reservoir other freshwater 48.6158 14.6762 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 AGATACGTGGACTGGCTACTAACTGTGCCTCTACTACTAGTAGAAGTAATTGCAGTACTAGCACTAGCTAAGGAAGTTTCTCGCTCACTAATTATGCGTTTGGTCCCAGCATCAGCTGCGATGATCGCGCTTGGTTACCCAGGTGAAATTTCAAATGATCAGAACACACAGGTTCTATACGGTGTTCTATCAACAATTCCATTCTTGTACATCCTGTACGTATTGTTCGTAGAGCTAGGTAAGTCACTAGATCGTCAGCCAGAAGGTGTTGCAGCGACAATTGGTCGCTTGCGTCTACTTCTAGTTGCGACATGGGGCGTCTACCCCAT RYVDWLLTVPLLLVEVIAVLALAKEVSRSLIMRLVPASAAMIALGYPGEISNDQNTQVLYGVLSTIPFLYILYVLFVELGKSLDRQPEGVAATIGRLRLLLVATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACGTGGACTGG------------------------CTACTAACTGTGCCTCTACTACTAGTAGAAGTAATTGCAGTACTAGCACTA---------GCT---AAGGAAGTTTCTCGC---TCACTA------------------------------------ATTATGCGT---TTGGTCCCAGCATCAGCTGCGATGATCGCGCTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AATGAT---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGTGTTCTATCAACAATTCCATTCTTGTACATCCTGTACGTATTG---------------TTC------GTA---GAGCTAGGTAAGTCACTAGATCGTCAG---------------CCAGAAGGTGTT---GCA---GCG---ACA---ATT---GGT---CGCTTG---CGTCTACTTCTAGTTGCG---------------------------------------------------------------ACATGG---------GGCGTCTACCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------IMR-LVPASAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------VLY-GVLSTIPFLYILYVL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-I-G-RL-RLLLVA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601685 [Actinorhodopsin] clone_15-1_KC601685 gi|523706364|gb|KC601685| Uncultured bacterium clone 15-1 actinorhodopsin gene, partial cds. Uncultured bacterium clone 15-1 actinorhodopsin gene, partial cds. KC601685 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 humic freshwater reservoir other freshwater 48.6158 14.6762 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGATATGTGGACTGGCTACTAACTGTGCCTCTACTACTAGTAGAAGTAATTGCAGTACTAGCACTAGCTAAGGAAGTTTCTCGCTCACTAATTATGCGTTTGGTCCCAGCATCAGCTGCGATGATCGCGCTTGGTTACCCAGGTGAAATTTCAAATGATCAGAACACACAGGTTCTATACGGTGTTCTATCAACAATTCCATTCTTGTACATCCTGTACGTATTGTTCGTAGAGCTAGGTAAGTCACTAGATCGTCAGCCAGAAGGTGTTGCAGCGACAATTGGTCGCTTGCGTCTACTTCTAGTTGCGACATGGGGCGTATATCCCAT RYVDWLLTVPLLLVEVIAVLALAKEVSRSLIMRLVPASAAMIALGYPGEISNDQNTQVLYGVLSTIPFLYILYVLFVELGKSLDRQPEGVAATIGRLRLLLVATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATATGTGGACTGG------------------------CTACTAACTGTGCCTCTACTACTAGTAGAAGTAATTGCAGTACTAGCACTA---------GCT---AAGGAAGTTTCTCGC---TCACTA------------------------------------ATTATGCGT---TTGGTCCCAGCATCAGCTGCGATGATCGCGCTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AATGAT---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGTGTTCTATCAACAATTCCATTCTTGTACATCCTGTACGTATTG---------------TTC------GTA---GAGCTAGGTAAGTCACTAGATCGTCAG---------------CCAGAAGGTGTT---GCA---GCG---ACA---ATT---GGT---CGCTTG---CGTCTACTTCTAGTTGCG---------------------------------------------------------------ACATGG---------GGCGTATATCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------IMR-LVPASAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------VLY-GVLSTIPFLYILYVL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-I-G-RL-RLLLVA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HF571327 [Actinorhodopsin] clone_BSdp_ActRdgge9_HF571327 gi|528066115|gb|HF571327| Uncultured bacterium partial actR gene for Actinorhodopsin, clone BSdp ActRdgge9. Uncultured bacterium partial actR gene for Actinorhodopsin, clone BSdp ActRdgge9. HF571327 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-juil-13 #na brackish water Baltic Sea marine 57.8 20 Distribution of acI-Actinorhodopsin genes in Baltic Sea salinity gradients indicates the success of facultative freshwater photoheterotrophs in brackish waters Salka,I., Wurzbacher,C., Garcia,S.L., Labrenz,M., Juergens,K. and Grossart,H.P. Unpublished #na #na TATAGGTATGTGGACTGGCTACTTACAGTTCCACTACTTCTAGTAGAAGTAATTGCAGTACTTGCACTAACAAAAGAAGTTTCTCGCTCACTAATCATGCGTCTGGTCCCAGCATCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAAATCTCAACCGATCAGAACACACAGGTTCTATACGGTGTTCTATCAACAATTCCATTCCTATACATCCTTTACGTACTATTCGTAGAGCTTGGTAAGTCAACGATCGCCAGCCAGCGGGTGTGCAGAG YRYVDWLLTVPLLLVEVIAVLALTKEVSRSLIMRLVPASAAMIALGYPGEISTDQNTQVLYGVLSTIPFLYILYVLFVELGKSTIASQRVCR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAGGTATGTGGACTGG------------------------CTACTTACAGTTCCACTACTTCTAGTAGAAGTAATTGCAGTACTTGCACTA---------ACA---AAAGAAGTTTCTCGC---TCACTA------------------------------------ATCATGCGT---CTGGTCCCAGCATCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAA---------ATC------------------------------------------------------------------------------TCA---ACCGAT---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGTGTTCTATCAACAATTCCATTCCTATACATCCTTTACGTACTA---------------TTC------GTA---GAGCTTGGTAAGTCA------------------------------------------------------ACG---ATC---GCC---AGCCAG---CGGGTGTGCAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYVDW--------LLTVPLLLVEVIAVLAL---T-KEVSR-SL------------IMR-LVPASAAMIALGYPGE---I--------------------------S-TD---Q---------NTQ------VLY-GVLSTIPFLYILYVL-----F--V-ELGKS------------------T-I-A-SQ-RVCR---------------------------------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_FJ545142 [Actinorhodopsin] clone_Superior_LG_F1_rhodopsin_gene_partial_cds_FJ545142 gi|224383959|gb|FJ545142| Uncultured microorganism clone Superior.LG.F1 putative rhodopsin gene, partial cds. Uncultured microorganism clone Superior.LG.F1 putative rhodopsin gene, partial cds. FJ545142 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juin-05 Lake Superior other freshwater 47.3 -91.67 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTACTCACTGTCCCTCTACTTCTTGTTGAAGTAGTTGCAGTACTTGCTCTTGCCAAAGCTACTTCTCGCTCGCTCATCACTCGCCTTGTTCCAGCATCTGCTGCAATGATCGCACTGGGCTATCCAGGAGAGATTTCAGCGGATCAGAACACACAGGTTATGCACGGTGTTCTATCAACGATTCCATTCCTTTACATTCTCTACATCCTCTTTGTAGAGCTCGGTAAGTCACTTGATAACCAACCAGCAGGAGTTGCAGATACCGTTGGTCGCTTGCGCTGGTTATTGATTGCTACG LLTVPLLLVEVVAVLALAKATSRSLITRLVPASAAMIALGYPGEISADQNTQVMHGVLSTIPFLYILYILFVELGKSLDNQPAGVADTVGRLRWLLIAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTCACTGTCCCTCTACTTCTTGTTGAAGTAGTTGCAGTACTTGCTCTT---------GCC---AAAGCTACTTCTCGC---TCGCTC------------------------------------ATCACTCGC---CTTGTTCCAGCATCTGCTGCAATGATCGCACTGGGCTATCCAGGAGAG---------ATT------------------------------------------------------------------------------TCA---GCGGAT---------CAG---------------------------AACACACAG------------------GTTATGCAC---GGTGTTCTATCAACGATTCCATTCCTTTACATTCTCTACATCCTC---------------TTT------GTA---GAGCTCGGTAAGTCACTTGATAACCAA---------------CCAGCAGGAGTT---GCA---GAT---ACC---GTT---GGT---CGCTTG---CGCTGGTTATTGATTGCT---------------------------------------------------------------ACG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLLVEVVAVLAL---A-KATSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-AD---Q---------NTQ------VMH-GVLSTIPFLYILYIL-----F--V-ELGKSLDNQ-----PAGV-A-D-T-V-G-RL-RWLLIA---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_FJ545150 [Actinorhodopsin] clone_Superior_LG_F2_rhodopsin_gene_partial_cds_FJ545150 gi|224383975|gb|FJ545150| Uncultured microorganism clone Superior.LG.F2 putative rhodopsin gene, partial cds. Uncultured microorganism clone Superior.LG.F2 putative rhodopsin gene, partial cds. FJ545150 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juin-05 Lake Superior other freshwater 47.3 -91.67 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTACTCACTGTCCCTCTACTTCTTGTTGAAGTAGTTGCAGTACTTGCTCTTGCCAAAGCTACTTCTCGCTCGCTCATCACTCGCCTTGTTCCAGCATCTGCTGCAATGATCGCACTGGGCTATCCAGGAGAGATTTCAGCGGATCAGAACACACAGGTTATGTACGGTGTTCTATCAACGATTCCATTCCTTTACATTCTCTACATCCTCTTTGTAGAGCTCGGTAAGTCACTTGATAACCAACCAGCAGGAGTTGCAGATACCGTTGGTCGCTTGCGCTGGTTATTGATTGCTACG LLTVPLLLVEVVAVLALAKATSRSLITRLVPASAAMIALGYPGEISADQNTQVMYGVLSTIPFLYILYILFVELGKSLDNQPAGVADTVGRLRWLLIAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTCACTGTCCCTCTACTTCTTGTTGAAGTAGTTGCAGTACTTGCTCTT---------GCC---AAAGCTACTTCTCGC---TCGCTC------------------------------------ATCACTCGC---CTTGTTCCAGCATCTGCTGCAATGATCGCACTGGGCTATCCAGGAGAG---------ATT------------------------------------------------------------------------------TCA---GCGGAT---------CAG---------------------------AACACACAG------------------GTTATGTAC---GGTGTTCTATCAACGATTCCATTCCTTTACATTCTCTACATCCTC---------------TTT------GTA---GAGCTCGGTAAGTCACTTGATAACCAA---------------CCAGCAGGAGTT---GCA---GAT---ACC---GTT---GGT---CGCTTG---CGCTGGTTATTGATTGCT---------------------------------------------------------------ACG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLLVEVVAVLAL---A-KATSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-AD---Q---------NTQ------VMY-GVLSTIPFLYILYIL-----F--V-ELGKSLDNQ-----PAGV-A-D-T-V-G-RL-RWLLIA---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_FJ545148 [Actinorhodopsin] clone_Superior_LG_D2_rhodopsin_gene_partial_cds_FJ545148 gi|224383971|gb|FJ545148| Uncultured microorganism clone Superior.LG.D2 putative rhodopsin gene, partial cds. Uncultured microorganism clone Superior.LG.D2 putative rhodopsin gene, partial cds. FJ545148 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juin-05 Lake Superior other freshwater 47.3 -91.67 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTACTCACTGTCCCTCTACTTCTTGTTGAAGTAGTTGCAGTACTTGCTCTTGCCAAAGCTACTTCTCGCTCGCTCATCACTCGCCTTGTTCCAGCATCTGCTGCAATGATCGCACTGGGCTATCCAGGAGAGATTTCAGCGGATCAGAACACACAGGTTATGTACGGTGTTCTATCAACGATTCCATTCCTTTACATTCTCTACATCCTCTTTGTAGAGCTCGGTAAGTCACTTGATAACCAACCAGCAGGAGTTGCAGATACCGTTGGTCGCTTGCGCTGGTTATTGATTGCTACG LLTVPLLLVEVVAVLALAKATSRSLITRLVPASAAMIALGYPGEISADQNTQVMYGVLSTIPFLYILYILFVELGKSLDNQPAGVADTVGRLRWLLIAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTCACTGTCCCTCTACTTCTTGTTGAAGTAGTTGCAGTACTTGCTCTT---------GCC---AAAGCTACTTCTCGC---TCGCTC------------------------------------ATCACTCGC---CTTGTTCCAGCATCTGCTGCAATGATCGCACTGGGCTATCCAGGAGAG---------ATT------------------------------------------------------------------------------TCA---GCGGAT---------CAG---------------------------AACACACAG------------------GTTATGTAC---GGTGTTCTATCAACGATTCCATTCCTTTACATTCTCTACATCCTC---------------TTT------GTA---GAGCTCGGTAAGTCACTTGATAACCAA---------------CCAGCAGGAGTT---GCA---GAT---ACC---GTT---GGT---CGCTTG---CGCTGGTTATTGATTGCT---------------------------------------------------------------ACG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLLVEVVAVLAL---A-KATSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-AD---Q---------NTQ------VMY-GVLSTIPFLYILYIL-----F--V-ELGKSLDNQ-----PAGV-A-D-T-V-G-RL-RWLLIA---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_FJ545151 [Actinorhodopsin] clone_Superior_LG_G2_rhodopsin_gene_partial_cds_FJ545151 gi|224383977|gb|FJ545151| Uncultured microorganism clone Superior.LG.G2 putative rhodopsin gene, partial cds. Uncultured microorganism clone Superior.LG.G2 putative rhodopsin gene, partial cds. FJ545151 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juin-05 Lake Superior other freshwater 47.3 -91.67 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTACTCACTGTCCCTCTACTTCTTGTTGAAGTAGTTGCAGTACTTGCTCTTGCCAAAGCTACTTCTCGCTCGCTCATCACTCGCCTTGTTCCAGCATCTGCTGCAATGATCGCACTGGGCTATCCAGGAGAGATTTCAGCGGATCAGAACACACAGGTTATGTACGGTGTTCTATCAACGATTCCATTCCTTTACATTCTCTACATCCTCTTTGTAGAGCTCGGTAAGTCACTTGAGAACCAACCAGCAGGAGTGGCAGATACCGTTGGTCGCTTGCGCTGGTTATTGATTGCTACG LLTVPLLLVEVVAVLALAKATSRSLITRLVPASAAMIALGYPGEISADQNTQVMYGVLSTIPFLYILYILFVELGKSLENQPAGVADTVGRLRWLLIAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTCACTGTCCCTCTACTTCTTGTTGAAGTAGTTGCAGTACTTGCTCTT---------GCC---AAAGCTACTTCTCGC---TCGCTC------------------------------------ATCACTCGC---CTTGTTCCAGCATCTGCTGCAATGATCGCACTGGGCTATCCAGGAGAG---------ATT------------------------------------------------------------------------------TCA---GCGGAT---------CAG---------------------------AACACACAG------------------GTTATGTAC---GGTGTTCTATCAACGATTCCATTCCTTTACATTCTCTACATCCTC---------------TTT------GTA---GAGCTCGGTAAGTCACTTGAGAACCAA---------------CCAGCAGGAGTG---GCA---GAT---ACC---GTT---GGT---CGCTTG---CGCTGGTTATTGATTGCT---------------------------------------------------------------ACG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLLVEVVAVLAL---A-KATSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-AD---Q---------NTQ------VMY-GVLSTIPFLYILYIL-----F--V-ELGKSLENQ-----PAGV-A-D-T-V-G-RL-RWLLIA---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_FJ545149 [Actinorhodopsin] clone_Superior_LG_E2_rhodopsin_gene_partial_cds_FJ545149 gi|224383973|gb|FJ545149| Uncultured microorganism clone Superior.LG.E2 putative rhodopsin gene, partial cds. Uncultured microorganism clone Superior.LG.E2 putative rhodopsin gene, partial cds. FJ545149 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juin-05 Lake Superior other freshwater 47.3 -91.67 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTACTCACTGTCCCTCTACTTCTTGTTGAAGTAGTTGCAGTACTTGCTCTTGCCAAAGCTACTTCTCGCTCGCTCATCACTCGCCTTGTTCCAGCATCTGCTGCAATGATCGCACTGGGCTATCCAGGAGAGATTTCAGCGGATCAGAACACACAGGTTATGTACGGTGTTCTATCAACGATTCCATTCCTTTACATTCTCTACATCCTCTTTGTAGAGCTCGGTAAGTCACTTGATAACCAACCAGCAGGAGTTGCAGATACCGTTGGTCGCTTGCGCTGGTTATTGATTGCTACG LLTVPLLLVEVVAVLALAKATSRSLITRLVPASAAMIALGYPGEISADQNTQVMYGVLSTIPFLYILYILFVELGKSLDNQPAGVADTVGRLRWLLIAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTCACTGTCCCTCTACTTCTTGTTGAAGTAGTTGCAGTACTTGCTCTT---------GCC---AAAGCTACTTCTCGC---TCGCTC------------------------------------ATCACTCGC---CTTGTTCCAGCATCTGCTGCAATGATCGCACTGGGCTATCCAGGAGAG---------ATT------------------------------------------------------------------------------TCA---GCGGAT---------CAG---------------------------AACACACAG------------------GTTATGTAC---GGTGTTCTATCAACGATTCCATTCCTTTACATTCTCTACATCCTC---------------TTT------GTA---GAGCTCGGTAAGTCACTTGATAACCAA---------------CCAGCAGGAGTT---GCA---GAT---ACC---GTT---GGT---CGCTTG---CGCTGGTTATTGATTGCT---------------------------------------------------------------ACG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLLVEVVAVLAL---A-KATSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-AD---Q---------NTQ------VMY-GVLSTIPFLYILYIL-----F--V-ELGKSLDNQ-----PAGV-A-D-T-V-G-RL-RWLLIA---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_FJ545153 [Actinorhodopsin] clone_Superior_LGR_B1_rhodopsin_gene_partial_cds_FJ545153 gi|224383981|gb|FJ545153| Uncultured microorganism clone Superior.LGR.B1 putative rhodopsin gene, partial cds. Uncultured microorganism clone Superior.LGR.B1 putative rhodopsin gene, partial cds. FJ545153 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juin-05 Lake Superior other freshwater 47.3 -91.67 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTCACTGTCCCTCTACTTCTTGTTGAAGTAGTTGCAGTACTTGCTCTTGCCAAAGCTACTTCTCGCTCGCTCATCACTCGCCTTGTTCCAGCATCTGCTGCAATGATCGCACTGGGCTATCCAGGAGAGATTTCAGCGGATCAGAACACACAGGTTATGTACGGTGTTCTATCAACGATTCCATTCCTTTACATTCTCTACATCCTCTTTGTAGAGCTCGGTAAGTCACTTGATAACCAACCAGCAGGAGTTGCAGATACCGTTGGTCGCTTGCGCTGGTTATTGATTGCTACG LTVPLLLVEVVAVLALAKATSRSLITRLVPASAAMIALGYPGEISADQNTQVMYGVLSTIPFLYILYILFVELGKSLDNQPAGVADTVGRLRWLLIAT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCACTGTCCCTCTACTTCTTGTTGAAGTAGTTGCAGTACTTGCTCTT---------GCC---AAAGCTACTTCTCGC---TCGCTC------------------------------------ATCACTCGC---CTTGTTCCAGCATCTGCTGCAATGATCGCACTGGGCTATCCAGGAGAG---------ATT------------------------------------------------------------------------------TCA---GCGGAT---------CAG---------------------------AACACACAG------------------GTTATGTAC---GGTGTTCTATCAACGATTCCATTCCTTTACATTCTCTACATCCTC---------------TTT------GTA---GAGCTCGGTAAGTCACTTGATAACCAA---------------CCAGCAGGAGTT---GCA---GAT---ACC---GTT---GGT---CGCTTG---CGCTGGTTATTGATTGCT---------------------------------------------------------------ACG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTVPLLLVEVVAVLAL---A-KATSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-AD---Q---------NTQ------VMY-GVLSTIPFLYILYIL-----F--V-ELGKSLDNQ-----PAGV-A-D-T-V-G-RL-RWLLIA---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_FJ545138 [Actinorhodopsin] clone_Superior_LG_A1_rhodopsin_gene_partial_cds_FJ545138 gi|224383951|gb|FJ545138| Uncultured microorganism clone Superior.LG.A1 putative rhodopsin gene, partial cds. Uncultured microorganism clone Superior.LG.A1 putative rhodopsin gene, partial cds. FJ545138 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juin-05 Lake Superior other freshwater 47.3 -91.67 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTACTGACTGTCCCTCTACTTCTTGTTGAAGTAGTTGCAGTACTTGCCCTTGCCAAAGCGACTTCTCGCTCGCTCATCACTCGCCTCGTTCCAGCATCTGCTGCAATGATCGCACTGGGCTATCCAGGAGAGATTTCATCGGACCAGAACACACAGGTTATGTACGGTGTTCTATCTACGATTCCATTCCTTTACATTCTCTACATCCTCTTTGTAGAGCTCGGTAAGTCACTTGATAACCAACCAGCAGGAGTTGCAGATACCGTTGGTCGTTTGCGATGGTTATTGATTGCTACA LLTVPLLLVEVVAVLALAKATSRSLITRLVPASAAMIALGYPGEISSDQNTQVMYGVLSTIPFLYILYILFVELGKSLDNQPAGVADTVGRLRWLLIAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTGACTGTCCCTCTACTTCTTGTTGAAGTAGTTGCAGTACTTGCCCTT---------GCC---AAAGCGACTTCTCGC---TCGCTC------------------------------------ATCACTCGC---CTCGTTCCAGCATCTGCTGCAATGATCGCACTGGGCTATCCAGGAGAG---------ATT------------------------------------------------------------------------------TCA---TCGGAC---------CAG---------------------------AACACACAG------------------GTTATGTAC---GGTGTTCTATCTACGATTCCATTCCTTTACATTCTCTACATCCTC---------------TTT------GTA---GAGCTCGGTAAGTCACTTGATAACCAA---------------CCAGCAGGAGTT---GCA---GAT---ACC---GTT---GGT---CGTTTG---CGATGGTTATTGATTGCT---------------------------------------------------------------ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLLVEVVAVLAL---A-KATSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-SD---Q---------NTQ------VMY-GVLSTIPFLYILYIL-----F--V-ELGKSLDNQ-----PAGV-A-D-T-V-G-RL-RWLLIA---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_FJ545141 [Actinorhodopsin] clone_Superior_LG_E1_rhodopsin_gene_partial_cds_FJ545141 gi|224383957|gb|FJ545141| Uncultured microorganism clone Superior.LG.E1 putative rhodopsin gene, partial cds. Uncultured microorganism clone Superior.LG.E1 putative rhodopsin gene, partial cds. FJ545141 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juin-05 Lake Superior other freshwater 47.3 -91.67 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTACTGACTGTCCCTCTACTTCTTGTTGAAGTAGTTGCAGTACTTGCCCTTGCCAAAGCGACTTCTCGCTCGCTCATCACTCGCCTCGTTCCAGCATCTGCTGCAATGATCGCACTGGGCTATCCAGGAGAGATTTCATCGGACCAGAACACACAGGTTATGTACGGTGTTCTATCTACGATTCCATTCCTTTACATTCTCTACATCCTCTTTGTAGAGCTCGGTAAGTCACTTGATAACCAACCAGCAGGAGTTGCAGATACCGTTGGTCGTTTGCGATGGTTATTGATTGCTACA LLTVPLLLVEVVAVLALAKATSRSLITRLVPASAAMIALGYPGEISSDQNTQVMYGVLSTIPFLYILYILFVELGKSLDNQPAGVADTVGRLRWLLIAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTGACTGTCCCTCTACTTCTTGTTGAAGTAGTTGCAGTACTTGCCCTT---------GCC---AAAGCGACTTCTCGC---TCGCTC------------------------------------ATCACTCGC---CTCGTTCCAGCATCTGCTGCAATGATCGCACTGGGCTATCCAGGAGAG---------ATT------------------------------------------------------------------------------TCA---TCGGAC---------CAG---------------------------AACACACAG------------------GTTATGTAC---GGTGTTCTATCTACGATTCCATTCCTTTACATTCTCTACATCCTC---------------TTT------GTA---GAGCTCGGTAAGTCACTTGATAACCAA---------------CCAGCAGGAGTT---GCA---GAT---ACC---GTT---GGT---CGTTTG---CGATGGTTATTGATTGCT---------------------------------------------------------------ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLLVEVVAVLAL---A-KATSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-SD---Q---------NTQ------VMY-GVLSTIPFLYILYIL-----F--V-ELGKSLDNQ-----PAGV-A-D-T-V-G-RL-RWLLIA---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_FJ545152 [Actinorhodopsin] clone_Superior_LG_H2_rhodopsin_gene_partial_cds_FJ545152 gi|224383979|gb|FJ545152| Uncultured microorganism clone Superior.LG.H2 putative rhodopsin gene, partial cds. Uncultured microorganism clone Superior.LG.H2 putative rhodopsin gene, partial cds. FJ545152 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juin-05 Lake Superior other freshwater 47.3 -91.67 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTACTGACTGTCCCTCTACTTCTTGTTGAAGTAGTTGCAGTACTTGCCCTTGCCAAAGCTACTTCTCGCTCGCTCATCACTCGCCTCGTTCCAGCATCTGCTGCAATGATCGCACTGGGCTATCCAGGAGAGATTTCATCGGACCAGAACACACAGGTTATGTACGGTGTTCTATCTACGATTCCATTCCTTTACATTCTCTACATCCTCTTTGTAGAGCTCGGTAAGTCACTTGATAACCAACCAGCAGGAGTTGCAGATACCGTTGGTCGTTTGCGATGGTTATTGATTGCTACA LLTVPLLLVEVVAVLALAKATSRSLITRLVPASAAMIALGYPGEISSDQNTQVMYGVLSTIPFLYILYILFVELGKSLDNQPAGVADTVGRLRWLLIAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTGACTGTCCCTCTACTTCTTGTTGAAGTAGTTGCAGTACTTGCCCTT---------GCC---AAAGCTACTTCTCGC---TCGCTC------------------------------------ATCACTCGC---CTCGTTCCAGCATCTGCTGCAATGATCGCACTGGGCTATCCAGGAGAG---------ATT------------------------------------------------------------------------------TCA---TCGGAC---------CAG---------------------------AACACACAG------------------GTTATGTAC---GGTGTTCTATCTACGATTCCATTCCTTTACATTCTCTACATCCTC---------------TTT------GTA---GAGCTCGGTAAGTCACTTGATAACCAA---------------CCAGCAGGAGTT---GCA---GAT---ACC---GTT---GGT---CGTTTG---CGATGGTTATTGATTGCT---------------------------------------------------------------ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLLVEVVAVLAL---A-KATSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-SD---Q---------NTQ------VMY-GVLSTIPFLYILYIL-----F--V-ELGKSLDNQ-----PAGV-A-D-T-V-G-RL-RWLLIA---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663810 [Actinorhodopsin] SCGC_AAA044N15_Actinobacteria_HQ663810 gi|325163217|gb|HQ663810| Actinobacterium SCGC AAA044N15 rhodopsin gene, partial cds Actinobacterium SCGC AAA044N15 rhodopsin gene, partial cds HQ663810 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938536 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTAGATTGGCTACTCACTGTTCCTCTACTTCTTGTTGAGGTAGTTGCAGTACTTGCCCTAGCCAAAGCTACTTCTCGCTCCCTCATCACTCGTCTCGTTCCAGCATCTGCTGCAATGATCGCACTGGGCTATCCAGGAGAGATCTCATCGGATCAGAACACACAGGTTATGTACGGTGTTCTATCAACGATTCCATTCCTTTACATTCTCTACATCCTCTTTGTAGAGCTTGGTAAGTCACTTGATAACCAACCAGCAGGAGTTGCAGATACCGTTGGTCGCTTGCGCTGGTTATTGATTGCTACATGGGGCGTCTACCCGATGGTCATA YVDWLLTVPLLLVEVVAVLALAKATSRSLITRLVPASAAMIALGYPGEISSDQNTQVMYGVLSTIPFLYILYILFVELGKSLDNQPAGVADTVGRLRWLLIATWGVYPMVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTAGATTGG------------------------CTACTCACTGTTCCTCTACTTCTTGTTGAGGTAGTTGCAGTACTTGCCCTA---------GCC---AAAGCTACTTCTCGC---TCCCTC------------------------------------ATCACTCGT---CTCGTTCCAGCATCTGCTGCAATGATCGCACTGGGCTATCCAGGAGAG---------ATC------------------------------------------------------------------------------TCA---TCGGAT---------CAG---------------------------AACACACAG------------------GTTATGTAC---GGTGTTCTATCAACGATTCCATTCCTTTACATTCTCTACATCCTC---------------TTT------GTA---GAGCTTGGTAAGTCACTTGATAACCAA---------------CCAGCAGGAGTT---GCA---GAT---ACC---GTT---GGT---CGCTTG---CGCTGGTTATTGATTGCT---------------------------------------------------------------ACATGG---------GGCGTCTACCCGATGGTCATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLLVEVVAVLAL---A-KATSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-SD---Q---------NTQ------VMY-GVLSTIPFLYILYIL-----F--V-ELGKSLDNQ-----PAGV-A-D-T-V-G-RL-RWLLIA---------------------TW---GVYPMVI----------------------------------------------------------------------------------------------- [Actinorhodopsin]_FJ545157 [Actinorhodopsin] clone_Superior_LGR_G1_rhodopsin_gene_partial_cds_FJ545157 gi|224383989|gb|FJ545157| Uncultured microorganism clone Superior.LGR.G1 putative rhodopsin gene, partial cds. Uncultured microorganism clone Superior.LGR.G1 putative rhodopsin gene, partial cds. FJ545157 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juin-05 Lake Superior other freshwater 47.3 -91.67 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na TTGACCGTTCCACTACTTCTTGTTGAAGTTGTAGCGGTTCTAGCTCTTACAAAATCAGTTTCTACCTCTCTGATAACTCGCCTCGTTCCAGCATCTGCTGCAATGATCGCACTTGGATATCCAGGAGAGATTTCATCTGATCAGAACACACAGGTTATGTATGGTGTTCTATCAACGATTCCATTCCTATACATTCTCTATGTTCTCTTTGTAGAGCTTGGAAAGTCACTAGATAAGCAGCCAGAGGGAGTAGCAGCCACCGTTGGTCGCCTACGTCTTCTTTTGATTGCTACG LTVPLLLVEVVAVLALTKSVSTSLITRLVPASAAMIALGYPGEISSDQNTQVMYGVLSTIPFLYILYVLFVELGKSLDKQPEGVAATVGRLRLLLIAT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGACCGTTCCACTACTTCTTGTTGAAGTTGTAGCGGTTCTAGCTCTT---------ACA---AAATCAGTTTCTACC---TCTCTG------------------------------------ATAACTCGC---CTCGTTCCAGCATCTGCTGCAATGATCGCACTTGGATATCCAGGAGAG---------ATT------------------------------------------------------------------------------TCA---TCTGAT---------CAG---------------------------AACACACAG------------------GTTATGTAT---GGTGTTCTATCAACGATTCCATTCCTATACATTCTCTATGTTCTC---------------TTT------GTA---GAGCTTGGAAAGTCACTAGATAAGCAG---------------CCAGAGGGAGTA---GCA---GCC---ACC---GTT---GGT---CGCCTA---CGTCTTCTTTTGATTGCT---------------------------------------------------------------ACG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTVPLLLVEVVAVLAL---T-KSVST-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-SD---Q---------NTQ------VMY-GVLSTIPFLYILYVL-----F--V-ELGKSLDKQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_FJ545158 [Actinorhodopsin] clone_Superior_LGR_H1_rhodopsin_gene_partial_cds_FJ545158 gi|224383991|gb|FJ545158| Uncultured microorganism clone Superior.LGR.H1 putative rhodopsin gene, partial cds. Uncultured microorganism clone Superior.LGR.H1 putative rhodopsin gene, partial cds. FJ545158 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juin-05 Lake Superior other freshwater 47.3 -91.67 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na TTGACCGTTCCACTACTTCTTGTTGAAGTTGTAGCGGTTCTAGCTCTTACAAAATCAGTTTCTACCTCTCTGATAACTCGCCTCGTTCCAGCATCTGCTGCAATGATCGCACTTGGATATCCAGGAGAGATTTCATCTGATCAGAACACACAGGTTATGTATGGTGTCCTATCAACGATTCCATTCCTATACATTCTCTATGTTCTCTTTGTAGAGCTTGGAAAGTCACTAGATAAGCAGCCAGAGGGAGTAGCAGCCACCGTTGGTCGCCTACGTCTTCTTTTGATTGCTACG LTVPLLLVEVVAVLALTKSVSTSLITRLVPASAAMIALGYPGEISSDQNTQVMYGVLSTIPFLYILYVLFVELGKSLDKQPEGVAATVGRLRLLLIAT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGACCGTTCCACTACTTCTTGTTGAAGTTGTAGCGGTTCTAGCTCTT---------ACA---AAATCAGTTTCTACC---TCTCTG------------------------------------ATAACTCGC---CTCGTTCCAGCATCTGCTGCAATGATCGCACTTGGATATCCAGGAGAG---------ATT------------------------------------------------------------------------------TCA---TCTGAT---------CAG---------------------------AACACACAG------------------GTTATGTAT---GGTGTCCTATCAACGATTCCATTCCTATACATTCTCTATGTTCTC---------------TTT------GTA---GAGCTTGGAAAGTCACTAGATAAGCAG---------------CCAGAGGGAGTA---GCA---GCC---ACC---GTT---GGT---CGCCTA---CGTCTTCTTTTGATTGCT---------------------------------------------------------------ACG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTVPLLLVEVVAVLAL---T-KSVST-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-SD---Q---------NTQ------VMY-GVLSTIPFLYILYVL-----F--V-ELGKSLDKQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_FJ545139 [Actinorhodopsin] clone_Superior_LG_C1_rhodopsin_gene_partial_cds_FJ545139 gi|224383953|gb|FJ545139| Uncultured microorganism clone Superior.LG.C1 putative rhodopsin gene, partial cds. Uncultured microorganism clone Superior.LG.C1 putative rhodopsin gene, partial cds. FJ545139 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juin-05 Lake Superior other freshwater 47.3 -91.67 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTATTGACCGTTCCACTACTTCTTGTTGAAGTTGTAGCGGTTCTAGCTCTTACAAAATCAGTTTCTACCTCTCTGATAACTCGCCTCGTTCCAGCATCTGCTGCAATGATCGCACTTGGATATCCAGGAGAGATTTCATCTGATCAGAACACACAGGTTATGTATGGTGTTCTATCAACGATTCCATTCCTATACATTCTCTATGTTCTCTTTGTAGAGCTTGGAAAGTCACTAGATAAGCAGCCAGAGGGAGTAGCAGCCACCGTTGGTCGCCTACGTCTTCTTTTGATTGCTACA LLTVPLLLVEVVAVLALTKSVSTSLITRLVPASAAMIALGYPGEISSDQNTQVMYGVLSTIPFLYILYVLFVELGKSLDKQPEGVAATVGRLRLLLIAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTGACCGTTCCACTACTTCTTGTTGAAGTTGTAGCGGTTCTAGCTCTT---------ACA---AAATCAGTTTCTACC---TCTCTG------------------------------------ATAACTCGC---CTCGTTCCAGCATCTGCTGCAATGATCGCACTTGGATATCCAGGAGAG---------ATT------------------------------------------------------------------------------TCA---TCTGAT---------CAG---------------------------AACACACAG------------------GTTATGTAT---GGTGTTCTATCAACGATTCCATTCCTATACATTCTCTATGTTCTC---------------TTT------GTA---GAGCTTGGAAAGTCACTAGATAAGCAG---------------CCAGAGGGAGTA---GCA---GCC---ACC---GTT---GGT---CGCCTA---CGTCTTCTTTTGATTGCT---------------------------------------------------------------ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLLVEVVAVLAL---T-KSVST-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-SD---Q---------NTQ------VMY-GVLSTIPFLYILYVL-----F--V-ELGKSLDKQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663781 [Actinorhodopsin] SCGC_AAA043C10_Gammaproteobacteria_HQ663781 gi|325163161|gb|HQ663781| Gamma proteobacterium SCGC AAA043C10 rhodopsin gene, partial cds Gamma proteobacterium SCGC AAA043C10 rhodopsin gene, partial cds HQ663781 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Gammaproteobacteria] taxon:939027 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTGGATTGGCTACTAACAGTTCCATTACTTCTAGTTGAGGTTATTGCAGTGCTTGCTCTAGCTAAATCTGTTTCTCGTTCATTAATCATGCGCCTAGTACCAGCATCTGCTGCAATGATTGCCCTCGGTTATCCTGGAGAGATCTCAAATACTCAGAGCACACAGATTCTTTATGGCGTTCTATCAACGATTCCATTCCTTTACATTCTCTACGTTCTCTTTGTAGAGCTAACCAAGTCACTCGATAACCAGCCAGAGGGTGTTGCTGCGACGGTTAGTCGTTTGCGTCTTCTACTTGTTGCTACGTGGGGCGTCTACCCGATG YVDWLLTVPLLLVEVIAVLALAKSVSRSLIMRLVPASAAMIALGYPGEISNTQSTQILYGVLSTIPFLYILYVLFVELTKSLDNQPEGVAATVSRLRLLLVATWGVYPM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTGGATTGG------------------------CTACTAACAGTTCCATTACTTCTAGTTGAGGTTATTGCAGTGCTTGCTCTA---------GCT---AAATCTGTTTCTCGT---TCATTA------------------------------------ATCATGCGC---CTAGTACCAGCATCTGCTGCAATGATTGCCCTCGGTTATCCTGGAGAG---------ATC------------------------------------------------------------------------------TCA---AATACT---------CAG---------------------------AGCACACAG------------------ATTCTTTAT---GGCGTTCTATCAACGATTCCATTCCTTTACATTCTCTACGTTCTC---------------TTT------GTA---GAGCTAACCAAGTCACTCGATAACCAG---------------CCAGAGGGTGTT---GCT---GCG---ACG---GTT---AGT---CGTTTG---CGTCTTCTACTTGTTGCT---------------------------------------------------------------ACGTGG---------GGCGTCTACCCGATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLLVEVIAVLAL---A-KSVSR-SL------------IMR-LVPASAAMIALGYPGE---I--------------------------S-NT---Q---------STQ------ILY-GVLSTIPFLYILYVL-----F--V-ELTKSLDNQ-----PEGV-A-A-T-V-S-RL-RLLLVA---------------------TW---GVYPM------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663822 [Actinorhodopsin] SCGC_AAA278J13_Actinobacteria_HQ663822 gi|325163241|gb|HQ663822| Actinobacterium SCGC AAA278J13 rhodopsin gene, partial cds Actinobacterium SCGC AAA278J13 rhodopsin gene, partial cds HQ663822 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938561 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTAGATTGGCTATTAACTGTTCCTCTACTTCTAGTTGAAGTAATTGCAGTGCTTGCACTTGCAAAGGAAGTTTCTCGCTCACTCATCACTCGTTTGGTTCCAGCAGCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAAATCTCAAACGATCAGAACACACAGGTTCTATACGGTGTTCTTTCAACACTTCCTTTCCTATACATCCTCTATGTCTTGTTCGTAGAGCTTGGCAAGTCACTTGATCGCCAGCCAGAAGGAGTTGCAGCAACTATCGGTCGCTTGCGTCTTCTTTTGATCGCGACATGGGGCGTCTACCCGATGGTCATAGCTTGTTTC YVDWLLTVPLLLVEVIAVLALAKEVSRSLITRLVPAAAAMIALGYPGEISNDQNTQVLYGVLSTLPFLYILYVLFVELGKSLDRQPEGVAATIGRLRLLLIATWGVYPMVIACF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTAGATTGG------------------------CTATTAACTGTTCCTCTACTTCTAGTTGAAGTAATTGCAGTGCTTGCACTT---------GCA---AAGGAAGTTTCTCGC---TCACTC------------------------------------ATCACTCGT---TTGGTTCCAGCAGCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAA---------ATC------------------------------------------------------------------------------TCA---AACGAT---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGTGTTCTTTCAACACTTCCTTTCCTATACATCCTCTATGTCTTG---------------TTC------GTA---GAGCTTGGCAAGTCACTTGATCGCCAG---------------CCAGAAGGAGTT---GCA---GCA---ACT---ATC---GGT---CGCTTG---CGTCTTCTTTTGATCGCG---------------------------------------------------------------ACATGG---------GGCGTCTACCCGATGGTCATAGCTTGTTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------ITR-LVPAAAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------VLY-GVLSTLPFLYILYVL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVYPMVIACF-------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663841 [Actinorhodopsin] SCGC_AAA280O16_Gammaproteobacteria_HQ663841 gi|325163278|gb|HQ663841| Gamma proteobacterium SCGC AAA280O16 rhodopsin gene, partial cds Gamma proteobacterium SCGC AAA280O16 rhodopsin gene, partial cds HQ663841 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Gammaproteobacteria] taxon:939108 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTAGATTGGCTATTAACTGTTCCTCTACTTCTAGTTGAAGTAATTGCAGTGCTTGCACTTGCAAAGGAAGTTTCTCGCTCACTCATCACTCGTTTGGTTCCAGCAGCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAAATCTCAAACGATCAGAACACACAGGTTCTATACGGTGTTCTTTCAACACTTCCTTTCCTATACATCCTCTATGTCTTGTTCGTAGAGCTTGGCAAGTCACTTGATCGCCAGCCAGAAGGAGTTGCAGCAACTATCGGTCGCTTGCGTCTTCTTTTGATCGCGACATGGGGCGTCTACCCGATG YVDWLLTVPLLLVEVIAVLALAKEVSRSLITRLVPAAAAMIALGYPGEISNDQNTQVLYGVLSTLPFLYILYVLFVELGKSLDRQPEGVAATIGRLRLLLIATWGVYPM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTAGATTGG------------------------CTATTAACTGTTCCTCTACTTCTAGTTGAAGTAATTGCAGTGCTTGCACTT---------GCA---AAGGAAGTTTCTCGC---TCACTC------------------------------------ATCACTCGT---TTGGTTCCAGCAGCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAA---------ATC------------------------------------------------------------------------------TCA---AACGAT---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGTGTTCTTTCAACACTTCCTTTCCTATACATCCTCTATGTCTTG---------------TTC------GTA---GAGCTTGGCAAGTCACTTGATCGCCAG---------------CCAGAAGGAGTT---GCA---GCA---ACT---ATC---GGT---CGCTTG---CGTCTTCTTTTGATCGCG---------------------------------------------------------------ACATGG---------GGCGTCTACCCGATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------ITR-LVPAAAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------VLY-GVLSTLPFLYILYVL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVYPM------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663825 [Actinorhodopsin] SCGC_AAA278L10_Actinobacteria_HQ663825 gi|325163247|gb|HQ663825| Actinobacterium SCGC AAA278L10 rhodopsin gene, partial cds Actinobacterium SCGC AAA278L10 rhodopsin gene, partial cds HQ663825 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938566 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTAGATTGGCTATTAACTGTTCCTCTACTTCTAGTTGAAGTAATTGCAGTGCTTGCACTTGCAAAGGAAGTTTCTCGCTCACTCATCACTCGTTTGGTTCCAGCAGCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAAATCTCAAACGATCAGAACACACAGTATATATACGGTGTTCTTTCAACACTTCCTTTCCTATACATCCTCTATGTCTTGTTCGTAGAGCTTGGTAAGTCACTTGATCGCCAGCCAGAAGGTGTTGCAGCAACTATCGGTCGCTTGCGTCTTCTTTTGATCGCGACATGGGGCGTCTACCCGATGGTC YVDWLLTVPLLLVEVIAVLALAKEVSRSLITRLVPAAAAMIALGYPGEISNDQNTQYIYGVLSTLPFLYILYVLFVELGKSLDRQPEGVAATIGRLRLLLIATWGVYPMV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTAGATTGG------------------------CTATTAACTGTTCCTCTACTTCTAGTTGAAGTAATTGCAGTGCTTGCACTT---------GCA---AAGGAAGTTTCTCGC---TCACTC------------------------------------ATCACTCGT---TTGGTTCCAGCAGCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAA---------ATC------------------------------------------------------------------------------TCA---AACGAT---------CAG---------------------------AACACACAG------------------TATATATAC---GGTGTTCTTTCAACACTTCCTTTCCTATACATCCTCTATGTCTTG---------------TTC------GTA---GAGCTTGGTAAGTCACTTGATCGCCAG---------------CCAGAAGGTGTT---GCA---GCA---ACT---ATC---GGT---CGCTTG---CGTCTTCTTTTGATCGCG---------------------------------------------------------------ACATGG---------GGCGTCTACCCGATGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------ITR-LVPAAAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------YIY-GVLSTLPFLYILYVL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVYPMV------------------------------------------------------------------------------------------------ [Actinorhodopsin]_HQ663843 [Actinorhodopsin] SCGC_AAA280P13_Actinobacteria_HQ663843 gi|325163282|gb|HQ663843| Actinobacterium SCGC AAA280P13 rhodopsin gene, partial cds Actinobacterium SCGC AAA280P13 rhodopsin gene, partial cds HQ663843 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938606 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTAGATTGGCTATTAACTGTTCCTCTACTTCTAGTTGAAGTAATTGCAGTGCTTGCACTTGCAAAGGAAGTTTCTCGCTCACTCATCACTCGTTTGGTTCCAGCAGCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAAATCTCAAACGATCAGAACACACAGTATATATACGGTGTTCTTTCAACACTTCCTTTCCTATACATCCTCTATGTCTTGTTCGTAGAGCTTGGTAAGTCACTTGATCGCCAGCCAGAAGGTGTTGCAGCAACTATCGGTCGCTTGCGTCTTCTTTTGATCGCGACATGGGGCGTCTACCCGATGGTCATAGCTTGTTTC YVDWLLTVPLLLVEVIAVLALAKEVSRSLITRLVPAAAAMIALGYPGEISNDQNTQYIYGVLSTLPFLYILYVLFVELGKSLDRQPEGVAATIGRLRLLLIATWGVYPMVIACF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTAGATTGG------------------------CTATTAACTGTTCCTCTACTTCTAGTTGAAGTAATTGCAGTGCTTGCACTT---------GCA---AAGGAAGTTTCTCGC---TCACTC------------------------------------ATCACTCGT---TTGGTTCCAGCAGCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAA---------ATC------------------------------------------------------------------------------TCA---AACGAT---------CAG---------------------------AACACACAG------------------TATATATAC---GGTGTTCTTTCAACACTTCCTTTCCTATACATCCTCTATGTCTTG---------------TTC------GTA---GAGCTTGGTAAGTCACTTGATCGCCAG---------------CCAGAAGGTGTT---GCA---GCA---ACT---ATC---GGT---CGCTTG---CGTCTTCTTTTGATCGCG---------------------------------------------------------------ACATGG---------GGCGTCTACCCGATGGTCATAGCTTGTTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------ITR-LVPAAAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------YIY-GVLSTLPFLYILYVL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVYPMVIACF-------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663839 [Actinorhodopsin] SCGC_AAA280K04_Actinobacteria_HQ663839 gi|325163274|gb|HQ663839| Actinobacterium SCGC AAA280K04 rhodopsin gene, partial cds Actinobacterium SCGC AAA280K04 rhodopsin gene, partial cds HQ663839 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938600 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTAGATTGGCTATTAACTGTTCCTCTACTTCTAGTTGAAGTAATTGCAGTGCTTGCACTTGCAAAGGAAGTTTCTCGCTCACTCATCACTCGTTTGGTTCCAGCAGCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAAATCTCAAACGATCAGAACACACAGGTTCTATACGGTGTTCTTTCAACACTTCCTTTCCTATACATCCTCTATGTCTTGTTCGTAGAGCTTGGTAAGTCACTTGATCGCCAGCCAGAAGGAGTTGCAGCAACTATCGGTCGCTTGCGTCTTCTTTTGATCGCGACATGGGGCGTCTACCCGATGGTCATAGCT YVDWLLTVPLLLVEVIAVLALAKEVSRSLITRLVPAAAAMIALGYPGEISNDQNTQVLYGVLSTLPFLYILYVLFVELGKSLDRQPEGVAATIGRLRLLLIATWGVYPMVIA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTAGATTGG------------------------CTATTAACTGTTCCTCTACTTCTAGTTGAAGTAATTGCAGTGCTTGCACTT---------GCA---AAGGAAGTTTCTCGC---TCACTC------------------------------------ATCACTCGT---TTGGTTCCAGCAGCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAA---------ATC------------------------------------------------------------------------------TCA---AACGAT---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGTGTTCTTTCAACACTTCCTTTCCTATACATCCTCTATGTCTTG---------------TTC------GTA---GAGCTTGGTAAGTCACTTGATCGCCAG---------------CCAGAAGGAGTT---GCA---GCA---ACT---ATC---GGT---CGCTTG---CGTCTTCTTTTGATCGCG---------------------------------------------------------------ACATGG---------GGCGTCTACCCGATGGTCATAGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------ITR-LVPAAAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------VLY-GVLSTLPFLYILYVL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVYPMVIA---------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663829 [Actinorhodopsin] SCGC_AAA278O16_Actinobacteria_HQ663829 gi|325163254|gb|HQ663829| Actinobacterium SCGC AAA278O16 rhodopsin gene, partial cds Actinobacterium SCGC AAA278O16 rhodopsin gene, partial cds HQ663829 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938579 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTAGATTGGCTATTAACTGTTCCTCTACTTCTAGTTGAAGTAATTGCAGTGCTTGCACTTGCAAAGGAAGTTTCTCGCTCACTCATCACTCGTTTGGTTCCAGCAGCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAAATCTCAAACGATCAGAACACACAGGTTCTATACGGTGTTCTTTCAACACTTCCTTTCCTATACATCCTCTATGTCTTGTTCGTAGAGCTTGGTAAGTCACTTGATCGCCAGCCAGAAGGAGTTGCAGCAACTATCGGTCGCTTGCGTCTTCTTTTGATCGCGACATGGGGTGTCTATCCGATG YVDWLLTVPLLLVEVIAVLALAKEVSRSLITRLVPAAAAMIALGYPGEISNDQNTQVLYGVLSTLPFLYILYVLFVELGKSLDRQPEGVAATIGRLRLLLIATWGVYPM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTAGATTGG------------------------CTATTAACTGTTCCTCTACTTCTAGTTGAAGTAATTGCAGTGCTTGCACTT---------GCA---AAGGAAGTTTCTCGC---TCACTC------------------------------------ATCACTCGT---TTGGTTCCAGCAGCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAA---------ATC------------------------------------------------------------------------------TCA---AACGAT---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGTGTTCTTTCAACACTTCCTTTCCTATACATCCTCTATGTCTTG---------------TTC------GTA---GAGCTTGGTAAGTCACTTGATCGCCAG---------------CCAGAAGGAGTT---GCA---GCA---ACT---ATC---GGT---CGCTTG---CGTCTTCTTTTGATCGCG---------------------------------------------------------------ACATGG---------GGTGTCTATCCGATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------ITR-LVPAAAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------VLY-GVLSTLPFLYILYVL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVYPM------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663794 [Actinorhodopsin] SCGC_AAA044B18_Actinobacteria_HQ663794 gi|325163186|gb|HQ663794| Actinobacterium SCGC AAA044B18 rhodopsin gene, partial cds Actinobacterium SCGC AAA044B18 rhodopsin gene, partial cds HQ663794 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938509 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTAGATTGGCTACTAACTGTTCCTCTACTTCTTGTAGAAGTAATTGCAGTGCTTGCACTTGCAAAGGAAGTTTCTCGCTCACTCATCACTCGTTTGGTTCCAGCAGCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAAATCTCAAACGATCAGAACACACAGGTTCTATACGGTGTTCTTTCAACACTTCCTTTCCTATACATCCTCTATGTCTTGTTCGTAGAGCTTGGTAAGTCACTTGATCGTCAGCCAGAAGGAGTTGCAGCAACTGTTGGTCGCTTGCGTCTTCTTTTGATCGCGACATGGGGCGTCTACCCGATGGTCATA YVDWLLTVPLLLVEVIAVLALAKEVSRSLITRLVPAAAAMIALGYPGEISNDQNTQVLYGVLSTLPFLYILYVLFVELGKSLDRQPEGVAATVGRLRLLLIATWGVYPMVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTAGATTGG------------------------CTACTAACTGTTCCTCTACTTCTTGTAGAAGTAATTGCAGTGCTTGCACTT---------GCA---AAGGAAGTTTCTCGC---TCACTC------------------------------------ATCACTCGT---TTGGTTCCAGCAGCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAA---------ATC------------------------------------------------------------------------------TCA---AACGAT---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGTGTTCTTTCAACACTTCCTTTCCTATACATCCTCTATGTCTTG---------------TTC------GTA---GAGCTTGGTAAGTCACTTGATCGTCAG---------------CCAGAAGGAGTT---GCA---GCA---ACT---GTT---GGT---CGCTTG---CGTCTTCTTTTGATCGCG---------------------------------------------------------------ACATGG---------GGCGTCTACCCGATGGTCATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------ITR-LVPAAAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------VLY-GVLSTLPFLYILYVL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYPMVI----------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663832 [Actinorhodopsin] SCGC_AAA278P03_Actinobacteria_HQ663832 gi|325163260|gb|HQ663832| Actinobacterium SCGC AAA278P03 rhodopsin gene, partial cds Actinobacterium SCGC AAA278P03 rhodopsin gene, partial cds HQ663832 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938581 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTAGATTGGCTACTAACTGTTCCTCTACTTCTAGTTGAAGTAATTGCAGTGCTTGCACTTGCAAAGGAAGTTTCTCGCTCACTCATCACTCGTTTGGTTCCAGCAGCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAAATCTCAAACGATCAGAACACACAGGTTCTATACGGTGTTCTTTCAACACTTCCTTTCCTATACATCCTCTATGTCTTGTTCGTAGAGCTTGGTAAGTCACTTGATCGTCAGCCAGAAGGAGTTGCAGCAACTGTTGGTCGCTTGCGTCTTCTTTTGATCGCGACATGGGGCGTCTAC YVDWLLTVPLLLVEVIAVLALAKEVSRSLITRLVPAAAAMIALGYPGEISNDQNTQVLYGVLSTLPFLYILYVLFVELGKSLDRQPEGVAATVGRLRLLLIATWGVY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTAGATTGG------------------------CTACTAACTGTTCCTCTACTTCTAGTTGAAGTAATTGCAGTGCTTGCACTT---------GCA---AAGGAAGTTTCTCGC---TCACTC------------------------------------ATCACTCGT---TTGGTTCCAGCAGCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAA---------ATC------------------------------------------------------------------------------TCA---AACGAT---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGTGTTCTTTCAACACTTCCTTTCCTATACATCCTCTATGTCTTG---------------TTC------GTA---GAGCTTGGTAAGTCACTTGATCGTCAG---------------CCAGAAGGAGTT---GCA---GCA---ACT---GTT---GGT---CGCTTG---CGTCTTCTTTTGATCGCG---------------------------------------------------------------ACATGG---------GGCGTCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------ITR-LVPAAAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------VLY-GVLSTLPFLYILYVL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVY--------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663826 [Actinorhodopsin] SCGC_AAA278M10_Actinobacteria_HQ663826 gi|325163249|gb|HQ663826| Actinobacterium SCGC AAA278M10 rhodopsin gene, partial cds Actinobacterium SCGC AAA278M10 rhodopsin gene, partial cds HQ663826 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938568 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTGGATTGGCTATTAACTGTTCCTCTACTTCTTGTAGAAGTAATTGCAGTGCTTGCACTTGCAAAGGAAGTTTCTCGCTCACTCATCACTCGTTTGGTTCCAGCAGCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAAATCTCAAACGATCAAAACACACAGGTTCTATACGGTGTTCTTTCAACACTTCCATTCCTATACATCCTCTATGTCTTGTTCGTAGAGCTTGGTAAGTCACTTGATCGCCAGCCAGAAGGAGTTGCAGCAACTATCGGTCGCTTGCGTCTTCTTTTGATCGCGACATGGGGCGTCTACCCGATGGTC YVDWLLTVPLLLVEVIAVLALAKEVSRSLITRLVPAAAAMIALGYPGEISNDQNTQVLYGVLSTLPFLYILYVLFVELGKSLDRQPEGVAATIGRLRLLLIATWGVYPMV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTGGATTGG------------------------CTATTAACTGTTCCTCTACTTCTTGTAGAAGTAATTGCAGTGCTTGCACTT---------GCA---AAGGAAGTTTCTCGC---TCACTC------------------------------------ATCACTCGT---TTGGTTCCAGCAGCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAA---------ATC------------------------------------------------------------------------------TCA---AACGAT---------CAA---------------------------AACACACAG------------------GTTCTATAC---GGTGTTCTTTCAACACTTCCATTCCTATACATCCTCTATGTCTTG---------------TTC------GTA---GAGCTTGGTAAGTCACTTGATCGCCAG---------------CCAGAAGGAGTT---GCA---GCA---ACT---ATC---GGT---CGCTTG---CGTCTTCTTTTGATCGCG---------------------------------------------------------------ACATGG---------GGCGTCTACCCGATGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------ITR-LVPAAAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------VLY-GVLSTLPFLYILYVL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVYPMV------------------------------------------------------------------------------------------------ [Actinorhodopsin]_HQ663754 [Actinorhodopsin] SCGC_AAA028B06_Actinobacteria_HQ663754 gi|325163107|gb|HQ663754| Actinobacterium SCGC AAA028B06 rhodopsin gene, partial cds Actinobacterium SCGC AAA028B06 rhodopsin gene, partial cds HQ663754 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938442 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Mendota other freshwater 46.0095 -89.7006 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTGGATTGGCTACTAACTGTTCCTCTACTTCTAGTTGAAGTAATTGCAGTGCTTGCACTTGCAAAGGAAGTTTCACGCTCACTCATCGCTCGTTTGGTTCCAGCATCAGCTGCAATGATCGCACTTGGTTACCCAGGTGAAATCTCAAACGATCAGAACACACAGATTATCTACGGTGTTCTATCAACACTTCCATTCCTATACATCCTCTATATCTTGTTCGTAGAGCTTGGTAAGTCACTTGATCGCCAGCCAGAAGGCGTTGCAGCAACCATCGGTCGCTTGCGTCTCCTTTTGATCGCGACATGGGGCGTCTACCCGATGGTCATA YVDWLLTVPLLLVEVIAVLALAKEVSRSLIARLVPASAAMIALGYPGEISNDQNTQIIYGVLSTLPFLYILYILFVELGKSLDRQPEGVAATIGRLRLLLIATWGVYPMVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTGGATTGG------------------------CTACTAACTGTTCCTCTACTTCTAGTTGAAGTAATTGCAGTGCTTGCACTT---------GCA---AAGGAAGTTTCACGC---TCACTC------------------------------------ATCGCTCGT---TTGGTTCCAGCATCAGCTGCAATGATCGCACTTGGTTACCCAGGTGAA---------ATC------------------------------------------------------------------------------TCA---AACGAT---------CAG---------------------------AACACACAG------------------ATTATCTAC---GGTGTTCTATCAACACTTCCATTCCTATACATCCTCTATATCTTG---------------TTC------GTA---GAGCTTGGTAAGTCACTTGATCGCCAG---------------CCAGAAGGCGTT---GCA---GCA---ACC---ATC---GGT---CGCTTG---CGTCTCCTTTTGATCGCG---------------------------------------------------------------ACATGG---------GGCGTCTACCCGATGGTCATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------IAR-LVPASAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------IIY-GVLSTLPFLYILYIL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVYPMVI----------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601746 [Actinorhodopsin] clone_8-3_KC601746 gi|523706486|gb|KC601746| Uncultured bacterium clone 8-3 actinorhodopsin gene, partial cds. Uncultured bacterium clone 8-3 actinorhodopsin gene, partial cds. KC601746 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 oligo-mesotrophic deep submontane freshwater lake other freshwater 47.82 13.38 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGTTATGTTGACTGGCTACTAACTGTTCCTCTACTTCTGGTTGAAGTTATTGCAGTGCTTGCACTTGCAAAGGAAGTTTCACGCTCACTAATCATGCGCCTTGTTCCAGCATCAGCTGCAATGATCGCACTTGGTTACCCAGGTGAAATTTCAAGCGATCAGAACACACAGGTTCTATACGGTGTTCTTTCAACACTTCCATTCCTATACATCCTCTATGTCTTGTTCGTAGAGCTTGGTAAGTCACTTGATCGCCAGCCAGAAGGCGTTGCAGCAACCATCGGTCGCTTGCGTCTCCTTTTGATCGCGACATGGGGCGTCTACCCAAT RYVDWLLTVPLLLVEVIAVLALAKEVSRSLIMRLVPASAAMIALGYPGEISSDQNTQVLYGVLSTLPFLYILYVLFVELGKSLDRQPEGVAATIGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTATGTTGACTGG------------------------CTACTAACTGTTCCTCTACTTCTGGTTGAAGTTATTGCAGTGCTTGCACTT---------GCA---AAGGAAGTTTCACGC---TCACTA------------------------------------ATCATGCGC---CTTGTTCCAGCATCAGCTGCAATGATCGCACTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AGCGAT---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGTGTTCTTTCAACACTTCCATTCCTATACATCCTCTATGTCTTG---------------TTC------GTA---GAGCTTGGTAAGTCACTTGATCGCCAG---------------CCAGAAGGCGTT---GCA---GCA---ACC---ATC---GGT---CGCTTG---CGTCTCCTTTTGATCGCG---------------------------------------------------------------ACATGG---------GGCGTCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------IMR-LVPASAAMIALGYPGE---I--------------------------S-SD---Q---------NTQ------VLY-GVLSTLPFLYILYVL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663758 [Actinorhodopsin] SCGC_AAA028D06_Actinobacteria_HQ663758 gi|325163115|gb|HQ663758| Actinobacterium SCGC AAA028D06 rhodopsin gene, partial cds Actinobacterium SCGC AAA028D06 rhodopsin gene, partial cds HQ663758 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938447 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Mendota other freshwater 46.0095 -89.7006 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) GTTGATTGGCTTCTAACTGTTCCTCTACTTCTTGTTGAAGTAATTGCAGTGCTTGCACTTGCAAAGGAAGTTTCAAGATCACTCATCATGCGTTTGGTTCCAGCATCAGCTGCGATGATCGCTCTTGGTTATCCAGGTGAAATCTCAGACGTCCAGAACACACAGATCCTTTACGGTGTTCTTTCAACACTTCCATTCCTATACATCCTCTACGTATTGTTCGTAGAGCTTGGTAAGTCACTTGATCGCCAGCCAGAAGGCGTTGCAGCAACCATTGGTCGCTTGCGCCTCCTTCTCATCGCGACATGGGGTGTCTATCCGATGGTCATA VDWLLTVPLLLVEVIAVLALAKEVSRSLIMRLVPASAAMIALGYPGEISDVQNTQILYGVLSTLPFLYILYVLFVELGKSLDRQPEGVAATIGRLRLLLIATWGVYPMVI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGATTGG------------------------CTTCTAACTGTTCCTCTACTTCTTGTTGAAGTAATTGCAGTGCTTGCACTT---------GCA---AAGGAAGTTTCAAGA---TCACTC------------------------------------ATCATGCGT---TTGGTTCCAGCATCAGCTGCGATGATCGCTCTTGGTTATCCAGGTGAA---------ATC------------------------------------------------------------------------------TCA---GACGTC---------CAG---------------------------AACACACAG------------------ATCCTTTAC---GGTGTTCTTTCAACACTTCCATTCCTATACATCCTCTACGTATTG---------------TTC------GTA---GAGCTTGGTAAGTCACTTGATCGCCAG---------------CCAGAAGGCGTT---GCA---GCA---ACC---ATT---GGT---CGCTTG---CGCCTCCTTCTCATCGCG---------------------------------------------------------------ACATGG---------GGTGTCTATCCGATGGTCATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------IMR-LVPASAAMIALGYPGE---I--------------------------S-DV---Q---------NTQ------ILY-GVLSTLPFLYILYVL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVYPMVI----------------------------------------------------------------------------------------------- [Actinorhodopsin]_HF571323 [Actinorhodopsin] clone_BSdp_ActRdgge4_HF571323 gi|528066107|gb|HF571323| Uncultured bacterium partial actR gene for Actinorhodopsin, clone BSdp ActRdgge4. Uncultured bacterium partial actR gene for Actinorhodopsin, clone BSdp ActRdgge4. HF571323 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-juil-13 #na brackish water Baltic Sea marine 57.8 20 Distribution of acI-Actinorhodopsin genes in Baltic Sea salinity gradients indicates the success of facultative freshwater photoheterotrophs in brackish waters Salka,I., Wurzbacher,C., Garcia,S.L., Labrenz,M., Juergens,K. and Grossart,H.P. Unpublished #na #na TATCGTTACGTTGACTGGTTCTTACAGTTCCCCTTACTTCTTGTTGAAGTAATTGCAGTACTAGCACTTGCAAAGGCAGTTGCTAAGTCACTCATCATGCGTCTGGTTCCAGCATCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAAATTCATCAGATCAGAACACACAAATCTTACGGTGTTCTATCAACAATTCCATTCCTATACATCCTTTACGTACTGTTCGTAGAGCT YRYVDWFLQFPLLLVEVIAVLALAKAVAKSLIMRLVPASAAMIALGYPGEIHQIRTHKSYGVLSTIPFLYILYVLFVE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCGTTACGTTGACTGG------------------------TTCTTACAGTTCCCCTTACTTCTTGTTGAAGTAATTGCAGTACTAGCACTT---------GCA---AAGGCAGTTGCTAAG---TCACTC------------------------------------ATCATGCGT---CTGGTTCCAGCATCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------CAT---CAGATC---------AGA------------------------------ACACAC------------------AAATCTTAC---GGTGTTCTATCAACAATTCCATTCCTATACATCCTTTACGTACTG---------------TTC------GTA---GAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYVDW--------FLQFPLLLVEVIAVLAL---A-KAVAK-SL------------IMR-LVPASAAMIALGYPGE---I--------------------------H-QI---R----------TH------KSY-GVLSTIPFLYILYVL-----F--V-E--------------------------------------------------------------------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663740 [Actinorhodopsin] SCGC_AAA027A19_Actinobacteria_HQ663740 gi|325163080|gb|HQ663740| Actinobacterium SCGC AAA027A19 rhodopsin gene, partial cds Actinobacterium SCGC AAA027A19 rhodopsin gene, partial cds HQ663740 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938427 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Mendota other freshwater 46.0095 -89.7006 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) ACTGTTCCTCTACTTCTTGTTGAAGTGATTGCAGTGCTTGCACTTGCAAAGGAAGTTTCAAAGTCACTCATCATGCGTTTGGTACCAGCTTCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAAATCTCAAACGATCAGAACACACAGATCCTTTACGGTGTTCTTTCAACACTTCCATTCCTATACATCCTCTACGTATTGTTCGTAGAGCTCGGTAAGTCACTTGATCGCCAGCCAGAAGGCGTTGCAGCAACCGTAGGTCGCTTGCGTATGCTT TVPLLLVEVIAVLALAKEVSKSLIMRLVPASAAMIALGYPGEISNDQNTQILYGVLSTLPFLYILYVLFVELGKSLDRQPEGVAATVGRLRML ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTTCCTCTACTTCTTGTTGAAGTGATTGCAGTGCTTGCACTT---------GCA---AAGGAAGTTTCAAAG---TCACTC------------------------------------ATCATGCGT---TTGGTACCAGCTTCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAA---------ATC------------------------------------------------------------------------------TCA---AACGAT---------CAG---------------------------AACACACAG------------------ATCCTTTAC---GGTGTTCTTTCAACACTTCCATTCCTATACATCCTCTACGTATTG---------------TTC------GTA---GAGCTCGGTAAGTCACTTGATCGCCAG---------------CCAGAAGGCGTT---GCA---GCA---ACC---GTA---GGT---CGCTTG---CGTATGCTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLLVEVIAVLAL---A-KEVSK-SL------------IMR-LVPASAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------ILY-GVLSTLPFLYILYVL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-V-G-RL-RML----------------------------------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663812 [Actinorhodopsin] SCGC_AAA278A21_Actinobacteria_HQ663812 gi|325163221|gb|HQ663812| Actinobacterium SCGC AAA278A21 rhodopsin gene, partial cds Actinobacterium SCGC AAA278A21 rhodopsin gene, partial cds HQ663812 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938540 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TACGTAGATTGGCTACTAACTGTTCCCCTACTTCTAGTTGAAGTAATTGCAGTGCTTGCACTTGCAAAGGAAGTTTCAAAGTCACTTATCACTCGTTTGGTCCCAGCAGCAGCTGCGATGATCGCACTTGGCTACCCAGGTGAAATCTCAAACGATCAGAACACACAGGTTCTATACGGTGTTCTTTCAACTCTCCCATTCCTATACATCCTTTACGTATTGTTCGTAGAGCTTGGTAAGTCACTTGATCGCCAGCCAGAAGGAGTTGCAGCAACTATTGGTCGCTTGCGTCTTCTCTTGATCGCGACATGGGGCGTCTACCCGATG YVDWLLTVPLLLVEVIAVLALAKEVSKSLITRLVPAAAAMIALGYPGEISNDQNTQVLYGVLSTLPFLYILYVLFVELGKSLDRQPEGVAATIGRLRLLLIATWGVYPM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACGTAGATTGG------------------------CTACTAACTGTTCCCCTACTTCTAGTTGAAGTAATTGCAGTGCTTGCACTT---------GCA---AAGGAAGTTTCAAAG---TCACTT------------------------------------ATCACTCGT---TTGGTCCCAGCAGCAGCTGCGATGATCGCACTTGGCTACCCAGGTGAA---------ATC------------------------------------------------------------------------------TCA---AACGAT---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGTGTTCTTTCAACTCTCCCATTCCTATACATCCTTTACGTATTG---------------TTC------GTA---GAGCTTGGTAAGTCACTTGATCGCCAG---------------CCAGAAGGAGTT---GCA---GCA---ACT---ATT---GGT---CGCTTG---CGTCTTCTCTTGATCGCG---------------------------------------------------------------ACATGG---------GGCGTCTACCCGATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLLVEVIAVLAL---A-KEVSK-SL------------ITR-LVPAAAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------VLY-GVLSTLPFLYILYVL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVYPM------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HE646803 [Actinorhodopsin] clone_CfsNWE10_HE646803 gi|363805772|gb|HE646803| Uncultured bacterium partial actR gene for Actinorhodopsin, clone CfsNWE10. Uncultured bacterium partial actR gene for Actinorhodopsin, clone CfsNWE10. HE646803 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 19-nov-12 2010 Lake Stechlin surface water other freshwater 53.17 13.03 Environmental actinorhodopsin expression revealed by a new in situ filtration and fixation sampler Wurzbacher,C., Salka,I. and Grossart,H.P. Environ Microbiol Rep 4 (5), 491-497 (2012) 23760893 acI-like TACCGGTATGTTGACTGGCTATTAACTGTTCCTCTACTTCTTGTTGAAGTTATTGCAGTGCTTGCACTTGCAAAGGAAGTTTCTCGCTCACTCATCTCTCGTTTGGTACCAGCATCAGCTGCAATGATCGCACTTGGTTACCCAGGTGAAATCTCAAACGATCAAAACACACAGGTCTTGTACGGTGTTCTTTCAACACTTCCATTCCTATACATCCTCTACATCTTGTTCGTAGAGCTTGGTAAGTCACTTGATCGCCAGCCAGAAGGTGTTGCAGCAACCGTAGGTCGCTTGCGTCTCCTCTTGATCGCGACATGGGGAGTCTATCCAATA YRYVDWLLTVPLLLVEVIAVLALAKEVSRSLISRLVPASAAMIALGYPGEISNDQNTQVLYGVLSTLPFLYILYILFVELGKSLDRQPEGVAATVGRLRLLLIATWGVYPI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCGGTATGTTGACTGG------------------------CTATTAACTGTTCCTCTACTTCTTGTTGAAGTTATTGCAGTGCTTGCACTT---------GCA---AAGGAAGTTTCTCGC---TCACTC------------------------------------ATCTCTCGT---TTGGTACCAGCATCAGCTGCAATGATCGCACTTGGTTACCCAGGTGAA---------ATC------------------------------------------------------------------------------TCA---AACGAT---------CAA---------------------------AACACACAG------------------GTCTTGTAC---GGTGTTCTTTCAACACTTCCATTCCTATACATCCTCTACATCTTG---------------TTC------GTA---GAGCTTGGTAAGTCACTTGATCGCCAG---------------CCAGAAGGTGTT---GCA---GCA---ACC---GTA---GGT---CGCTTG---CGTCTCCTCTTGATCGCG---------------------------------------------------------------ACATGG---------GGAGTCTATCCAATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYVDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------ISR-LVPASAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------VLY-GVLSTLPFLYILYIL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYPI------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HE646856 [Actinorhodopsin] clone_QiwNWEx9_HE646856 gi|363805878|gb|HE646856| Uncultured bacterium partial actR gene for Actinorhodopsin, clone QiwNWEx9. Uncultured bacterium partial actR gene for Actinorhodopsin, clone QiwNWEx9. HE646856 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 19-nov-12 2010 Lake Stechlin surface water other freshwater 53.17 13.03 Environmental actinorhodopsin expression revealed by a new in situ filtration and fixation sampler Wurzbacher,C., Salka,I. and Grossart,H.P. Environ Microbiol Rep 4 (5), 491-497 (2012) 23760893 acI-like TATAGGTATGTTGACTGGCTATTAACTGTTCCTCTACTTCTTGTTGAAGTTATTGCAGTGCTTGCACTCGCAAAGGAAGTTTCTCGCTCACTCATCTCTCGTTTGGTACCAGCATCAGCTGCAATGATCGCACTTGGTTACCCAGGTGAAATCTCAAACGATCAAAACACACAGGTCTTGTACGGTGTTCTTTCAACACTTCCATTCCTATACATCCTCTACATCTTGTTCGTAGAGCTTGGTAAGTCACTTGATCGCCAGCCAGAAGGTGTTGCAGCAACCGTAGGTCGCTTGCGTCTCCTCTTGATCGCGACATGGGGCGTCTATCCTATA YRYVDWLLTVPLLLVEVIAVLALAKEVSRSLISRLVPASAAMIALGYPGEISNDQNTQVLYGVLSTLPFLYILYILFVELGKSLDRQPEGVAATVGRLRLLLIATWGVYPI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAGGTATGTTGACTGG------------------------CTATTAACTGTTCCTCTACTTCTTGTTGAAGTTATTGCAGTGCTTGCACTC---------GCA---AAGGAAGTTTCTCGC---TCACTC------------------------------------ATCTCTCGT---TTGGTACCAGCATCAGCTGCAATGATCGCACTTGGTTACCCAGGTGAA---------ATC------------------------------------------------------------------------------TCA---AACGAT---------CAA---------------------------AACACACAG------------------GTCTTGTAC---GGTGTTCTTTCAACACTTCCATTCCTATACATCCTCTACATCTTG---------------TTC------GTA---GAGCTTGGTAAGTCACTTGATCGCCAG---------------CCAGAAGGTGTT---GCA---GCA---ACC---GTA---GGT---CGCTTG---CGTCTCCTCTTGATCGCG---------------------------------------------------------------ACATGG---------GGCGTCTATCCTATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYVDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------ISR-LVPASAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------VLY-GVLSTLPFLYILYIL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYPI------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HE646830 [Actinorhodopsin] clone_QiuNWEx3_HE646830 gi|363805826|gb|HE646830| Uncultured bacterium partial actR gene for Actinorhodopsin, clone QiuNWEx3. Uncultured bacterium partial actR gene for Actinorhodopsin, clone QiuNWEx3. HE646830 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 19-nov-12 2010 Lake Stechlin surface water other freshwater 53.17 13.03 Environmental actinorhodopsin expression revealed by a new in situ filtration and fixation sampler Wurzbacher,C., Salka,I. and Grossart,H.P. Environ Microbiol Rep 4 (5), 491-497 (2012) 23760893 acI-like TATCGGTACGCTGATTGGCTATTAACTGTTCCTCTACTTCTTGTTGAAGTTATTGCAGTGCTTGCACTTGCAAAGGAAGTTTCTCGCTCACTCATCTCTCGTTTGGTACCAGCATCAGCTGCAATGATCGCACTTGGTTACCCAGGTGAAATCTCAAACGATCAAAACACACAGGTCTTGTACGGTGTTCTTTCAACACTTCCATTCCTATACATCCTCTACATCTTGTTCGTAGAGCTTGGTAAGTCACTTGATCGCCAGCCAGAAGGTGTTGCAGCAACCGTAGGTCGCTTGCGTCTCCTCTTGATCGCGACATGGGGCGTTTACCCGATA YRYADWLLTVPLLLVEVIAVLALAKEVSRSLISRLVPASAAMIALGYPGEISNDQNTQVLYGVLSTLPFLYILYILFVELGKSLDRQPEGVAATVGRLRLLLIATWGVYPI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCGGTACGCTGATTGG------------------------CTATTAACTGTTCCTCTACTTCTTGTTGAAGTTATTGCAGTGCTTGCACTT---------GCA---AAGGAAGTTTCTCGC---TCACTC------------------------------------ATCTCTCGT---TTGGTACCAGCATCAGCTGCAATGATCGCACTTGGTTACCCAGGTGAA---------ATC------------------------------------------------------------------------------TCA---AACGAT---------CAA---------------------------AACACACAG------------------GTCTTGTAC---GGTGTTCTTTCAACACTTCCATTCCTATACATCCTCTACATCTTG---------------TTC------GTA---GAGCTTGGTAAGTCACTTGATCGCCAG---------------CCAGAAGGTGTT---GCA---GCA---ACC---GTA---GGT---CGCTTG---CGTCTCCTCTTGATCGCG---------------------------------------------------------------ACATGG---------GGCGTTTACCCGATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYADW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------ISR-LVPASAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------VLY-GVLSTLPFLYILYIL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYPI------------------------------------------------------------------------------------------------- [Actinorhodopsin]_FJ545140 [Actinorhodopsin] clone_Superior_LG_D1_rhodopsin_gene_partial_cds_FJ545140 gi|224383955|gb|FJ545140| Uncultured microorganism clone Superior.LG.D1 putative rhodopsin gene, partial cds. Uncultured microorganism clone Superior.LG.D1 putative rhodopsin gene, partial cds. FJ545140 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juin-05 Lake Superior other freshwater 47.3 -91.67 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTATTAACTGTTCCTCTACTTCTTGTTGAAGTTATTGCAGTGCTTGCACTTGCAAAGGAAGTTTCAAGGTCACTCATCACTCGTTTGGTTCCAGCTTCAGCTGCAATGATTGCACTTGGTTACCCAGGTGAAATCTCAAACGATCAGAACACACAGGTTATGTACGGAGTTCTTTCAACACTTCCATTCCTCTACATTCTCTATGTCTTGTTCGTAGAACTCGGCAAGTCACTTGATCGCCAGCCTGAAGGAGTTGCCGCAACCGTTGGTCGCTTGCGCTTGCTTCTAGTTGCGACA LLTVPLLLVEVIAVLALAKEVSRSLITRLVPASAAMIALGYPGEISNDQNTQVMYGVLSTLPFLYILYVLFVELGKSLDRQPEGVAATVGRLRLLLVAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACTGTTCCTCTACTTCTTGTTGAAGTTATTGCAGTGCTTGCACTT---------GCA---AAGGAAGTTTCAAGG---TCACTC------------------------------------ATCACTCGT---TTGGTTCCAGCTTCAGCTGCAATGATTGCACTTGGTTACCCAGGTGAA---------ATC------------------------------------------------------------------------------TCA---AACGAT---------CAG---------------------------AACACACAG------------------GTTATGTAC---GGAGTTCTTTCAACACTTCCATTCCTCTACATTCTCTATGTCTTG---------------TTC------GTA---GAACTCGGCAAGTCACTTGATCGCCAG---------------CCTGAAGGAGTT---GCC---GCA---ACC---GTT---GGT---CGCTTG---CGCTTGCTTCTAGTTGCG---------------------------------------------------------------ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------VMY-GVLSTLPFLYILYVL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-V-G-RL-RLLLVA---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601692 [Actinorhodopsin] clone_16-7_KC601692 gi|523706378|gb|KC601692| Uncultured bacterium clone 16-7 actinorhodopsin gene, partial cds. Uncultured bacterium clone 16-7 actinorhodopsin gene, partial cds. KC601692 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 humic freshwater reservoir other freshwater 48.6158 14.6762 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGATACGTGGACTGGCTACTAACTGTTCCACTACTTCTAGTTGAAGTTATTGCAGTGCTTGCACTTGCAAAGGAAGTTTCTAAGTCACTTATCACTCGTTTGGTTCCAGCATCAGCTGCAATGATCGCACTTGGCTACCCAGGTGAAATCTCAAACGACCAGAACACACAAATTCTTTACGGTGTTCTATCAACACTTCCATTCCTATACATCCTTTATGTTCTATTCGTAGAGCTAGGAAAGTCACTTGATCGTCAACCTGATGGCGTTGCAGCAACCGTTGGTCGCTTGCGTCTGCTTCTAATTGCGACTTGGGGCGTCTACCCTAT RYVDWLLTVPLLLVEVIAVLALAKEVSKSLITRLVPASAAMIALGYPGEISNDQNTQILYGVLSTLPFLYILYVLFVELGKSLDRQPDGVAATVGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACGTGGACTGG------------------------CTACTAACTGTTCCACTACTTCTAGTTGAAGTTATTGCAGTGCTTGCACTT---------GCA---AAGGAAGTTTCTAAG---TCACTT------------------------------------ATCACTCGT---TTGGTTCCAGCATCAGCTGCAATGATCGCACTTGGCTACCCAGGTGAA---------ATC------------------------------------------------------------------------------TCA---AACGAC---------CAG---------------------------AACACACAA------------------ATTCTTTAC---GGTGTTCTATCAACACTTCCATTCCTATACATCCTTTATGTTCTA---------------TTC------GTA---GAGCTAGGAAAGTCACTTGATCGTCAA---------------CCTGATGGCGTT---GCA---GCA---ACC---GTT---GGT---CGCTTG---CGTCTGCTTCTAATTGCG---------------------------------------------------------------ACTTGG---------GGCGTCTACCCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLLLVEVIAVLAL---A-KEVSK-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------ILY-GVLSTLPFLYILYVL-----F--V-ELGKSLDRQ-----PDGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601718 [Actinorhodopsin] clone_21-4_KC601718 gi|523706430|gb|KC601718| Uncultured bacterium clone 21-4 actinorhodopsin gene, partial cds. Uncultured bacterium clone 21-4 actinorhodopsin gene, partial cds. KC601718 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 humic freshwater reservoir other freshwater 48.6158 14.6762 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGGTACGTTGACTGGCTACTAACTGTTCCACTACTTCTAGTTGAAGTTATTGCAGTGCTTGCACTTGCAAAGGAAGTTTCTAAGTCACTTATCACTCGTTTGGTTCCAGCATCAGCTGCAATGATCGCACTTGGCTACCCAGGTGAAATCTCAAACGACCAGAACACACAAATTCTTTACGGTGTTCTATCAACACTTCCATTCCTATACATCCTTTATGTTCTATTCGTAGAGCTAGGAAAGTCACTTGATCGTCAACCTGATGGCGTTGCAGCAACCGTTGGTCGCTTGCGTCTGCTTCTAATTGCGACTTGGGGCGTCTATCCTAT RYVDWLLTVPLLLVEVIAVLALAKEVSKSLITRLVPASAAMIALGYPGEISNDQNTQILYGVLSTLPFLYILYVLFVELGKSLDRQPDGVAATVGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTACGTTGACTGG------------------------CTACTAACTGTTCCACTACTTCTAGTTGAAGTTATTGCAGTGCTTGCACTT---------GCA---AAGGAAGTTTCTAAG---TCACTT------------------------------------ATCACTCGT---TTGGTTCCAGCATCAGCTGCAATGATCGCACTTGGCTACCCAGGTGAA---------ATC------------------------------------------------------------------------------TCA---AACGAC---------CAG---------------------------AACACACAA------------------ATTCTTTAC---GGTGTTCTATCAACACTTCCATTCCTATACATCCTTTATGTTCTA---------------TTC------GTA---GAGCTAGGAAAGTCACTTGATCGTCAA---------------CCTGATGGCGTT---GCA---GCA---ACC---GTT---GGT---CGCTTG---CGTCTGCTTCTAATTGCG---------------------------------------------------------------ACTTGG---------GGCGTCTATCCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLLLVEVIAVLAL---A-KEVSK-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------ILY-GVLSTLPFLYILYVL-----F--V-ELGKSLDRQ-----PDGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601698 [Actinorhodopsin] clone_17-8_KC601698 gi|523706390|gb|KC601698| Uncultured bacterium clone 17-8 actinorhodopsin gene, partial cds. Uncultured bacterium clone 17-8 actinorhodopsin gene, partial cds. KC601698 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 humic freshwater reservoir other freshwater 48.6158 14.6762 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGCTACGTGGATTGGCTACTAACTGTTCCACTACTTCTAGTTGAAGTTATTGCAGTGCTTGCACCTGCAAAGGAAGTTTCTAAGTCACTTATCACTCGTTTGGTTCCAGCATCAGCTGCAATGATCGCACTTGGCCACCCAGGTGAAATCTCAAACGACCAGAACACACAAATTCTTTACGGTGTTCTATCAACACTTCCATTCCTATACATCCTTTATGTTCTATTCGTAGAGCTAGGAAAGTCACTTGATCGTCAACCTGATGGCGTTGCAGCAACCGTTGGTCGCTTGCGTCTGCTTCTAATTGCGACTTGGGGCGTCTACCCTAT RYVDWLLTVPLLLVEVIAVLAPAKEVSKSLITRLVPASAAMIALGHPGEISNDQNTQILYGVLSTLPFLYILYVLFVELGKSLDRQPDGVAATVGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTACGTGGATTGG------------------------CTACTAACTGTTCCACTACTTCTAGTTGAAGTTATTGCAGTGCTTGCACCT---------GCA---AAGGAAGTTTCTAAG---TCACTT------------------------------------ATCACTCGT---TTGGTTCCAGCATCAGCTGCAATGATCGCACTTGGCCACCCAGGTGAA---------ATC------------------------------------------------------------------------------TCA---AACGAC---------CAG---------------------------AACACACAA------------------ATTCTTTAC---GGTGTTCTATCAACACTTCCATTCCTATACATCCTTTATGTTCTA---------------TTC------GTA---GAGCTAGGAAAGTCACTTGATCGTCAA---------------CCTGATGGCGTT---GCA---GCA---ACC---GTT---GGT---CGCTTG---CGTCTGCTTCTAATTGCG---------------------------------------------------------------ACTTGG---------GGCGTCTACCCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLLLVEVIAVLAP---A-KEVSK-SL------------ITR-LVPASAAMIALGHPGE---I--------------------------S-ND---Q---------NTQ------ILY-GVLSTLPFLYILYVL-----F--V-ELGKSLDRQ-----PDGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601703 [Actinorhodopsin] clone_19-1_KC601703 gi|523706400|gb|KC601703| Uncultured bacterium clone 19-1 actinorhodopsin gene, partial cds. Uncultured bacterium clone 19-1 actinorhodopsin gene, partial cds. KC601703 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 humic freshwater reservoir other freshwater 48.6158 14.6762 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGCTATGTGGACTGGCTACTAACTGTTCCACTACTTCTAGTTGAAGTTATTGCAGTGCTTGCACTTGCAAAGGAAGTTTCTAAGTCACTTATCACTCGTTTGGTTCCAGCATCAGCTGCAATGATCGCACTTGGCTACCCAGGTGAAATCTCAAACGACCAGAACACACAAATTCTTTACGGTGTTCTATCAACACTTCCATTCCTATACATCCTTTATGTTCTATTCGTAGAGCTAGGAAAGTCACTTGATCGTCAACCTGATGGCGTTGCAGCAACCGTTGGTCGCTTGCGTCTGCTTCTAATTGCGACTTGGGGCGTCTACCCTAT RYVDWLLTVPLLLVEVIAVLALAKEVSKSLITRLVPASAAMIALGYPGEISNDQNTQILYGVLSTLPFLYILYVLFVELGKSLDRQPDGVAATVGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTATGTGGACTGG------------------------CTACTAACTGTTCCACTACTTCTAGTTGAAGTTATTGCAGTGCTTGCACTT---------GCA---AAGGAAGTTTCTAAG---TCACTT------------------------------------ATCACTCGT---TTGGTTCCAGCATCAGCTGCAATGATCGCACTTGGCTACCCAGGTGAA---------ATC------------------------------------------------------------------------------TCA---AACGAC---------CAG---------------------------AACACACAA------------------ATTCTTTAC---GGTGTTCTATCAACACTTCCATTCCTATACATCCTTTATGTTCTA---------------TTC------GTA---GAGCTAGGAAAGTCACTTGATCGTCAA---------------CCTGATGGCGTT---GCA---GCA---ACC---GTT---GGT---CGCTTG---CGTCTGCTTCTAATTGCG---------------------------------------------------------------ACTTGG---------GGCGTCTACCCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLLLVEVIAVLAL---A-KEVSK-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------ILY-GVLSTLPFLYILYVL-----F--V-ELGKSLDRQ-----PDGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601687 [Actinorhodopsin] clone_15-5_KC601687 gi|523706368|gb|KC601687| Uncultured bacterium clone 15-5 actinorhodopsin gene, partial cds. Uncultured bacterium clone 15-5 actinorhodopsin gene, partial cds. KC601687 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 humic freshwater reservoir other freshwater 48.6158 14.6762 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 AGGTATGTGGACTGGCTACTAACTGTTCCACTACTTCTAGTTGAAGTTATTGCAGTGCTTGCACTTGCAAAGGAAGTTTCTAAGTCACTTATCACTCGTTTGGTTCCAGCATCAGCTGCAATGATCGCACTTGGCTACCCAGGTGAAATCTCAAACGACCAGAACACACAAATTCTTTACGGTGTTCTATCAACACTTTCATTCCTATACATCCTTTATGTTCTATTCGTAGAGCTAGGAAAGTCACTTGATCGTCAACCTGATGGCGTTGCAGCAACCGTTGGTCGCTTGCGTCTGCTTCTAATTGCGACTTGGGGCGTATACCCGAT RYVDWLLTVPLLLVEVIAVLALAKEVSKSLITRLVPASAAMIALGYPGEISNDQNTQILYGVLSTLSFLYILYVLFVELGKSLDRQPDGVAATVGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTATGTGGACTGG------------------------CTACTAACTGTTCCACTACTTCTAGTTGAAGTTATTGCAGTGCTTGCACTT---------GCA---AAGGAAGTTTCTAAG---TCACTT------------------------------------ATCACTCGT---TTGGTTCCAGCATCAGCTGCAATGATCGCACTTGGCTACCCAGGTGAA---------ATC------------------------------------------------------------------------------TCA---AACGAC---------CAG---------------------------AACACACAA------------------ATTCTTTAC---GGTGTTCTATCAACACTTTCATTCCTATACATCCTTTATGTTCTA---------------TTC------GTA---GAGCTAGGAAAGTCACTTGATCGTCAA---------------CCTGATGGCGTT---GCA---GCA---ACC---GTT---GGT---CGCTTG---CGTCTGCTTCTAATTGCG---------------------------------------------------------------ACTTGG---------GGCGTATACCCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLLLVEVIAVLAL---A-KEVSK-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------ILY-GVLSTLSFLYILYVL-----F--V-ELGKSLDRQ-----PDGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HF571296 [Actinorhodopsin] clone_BSActR_OTU13_HF571296 gi|528066053|gb|HF571296| Uncultured bacterium partial actR gene for Actinorhodopsin, clone BSActR OTU13. Uncultured bacterium partial actR gene for Actinorhodopsin, clone BSActR OTU13. HF571296 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-juil-13 #na brackish water Baltic Sea marine 57.8 20 Distribution of acI-Actinorhodopsin genes in Baltic Sea salinity gradients indicates the success of facultative freshwater photoheterotrophs in brackish waters Salka,I., Wurzbacher,C., Garcia,S.L., Labrenz,M., Juergens,K. and Grossart,H.P. Unpublished #na #na TATCGTTATGCGGACTGGCTACTAACTGTTCCTCTACTTCTAGTTGAAGTTATTGCAGTGCTTGCACTTGCAAAGGAAGTTTCAAAGTCACTCATCACTCGTTTGGTTCCAGCTTCAGCTGCAATGATCGCACTTGGTTACCCAGGTGAAATCTCAAACGACCAGAACACACAGATTCTTTACGGTGTTCTATCAACACTTCCATTCCTATACATCCTTTACGTACTATTCGTAGAGCTCGGTAAGTCACTAGATCGTCAACCAGAAGGTGTTGCAGCAACCGTTGGTCGCTTGCGCCTACTTCTAATTGCGACATGGGGCGTCTATCCAATA YRYADWLLTVPLLLVEVIAVLALAKEVSKSLITRLVPASAAMIALGYPGEISNDQNTQILYGVLSTLPFLYILYVLFVELGKSLDRQPEGVAATVGRLRLLLIATWGVYPI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCGTTATGCGGACTGG------------------------CTACTAACTGTTCCTCTACTTCTAGTTGAAGTTATTGCAGTGCTTGCACTT---------GCA---AAGGAAGTTTCAAAG---TCACTC------------------------------------ATCACTCGT---TTGGTTCCAGCTTCAGCTGCAATGATCGCACTTGGTTACCCAGGTGAA---------ATC------------------------------------------------------------------------------TCA---AACGAC---------CAG---------------------------AACACACAG------------------ATTCTTTAC---GGTGTTCTATCAACACTTCCATTCCTATACATCCTTTACGTACTA---------------TTC------GTA---GAGCTCGGTAAGTCACTAGATCGTCAA---------------CCAGAAGGTGTT---GCA---GCA---ACC---GTT---GGT---CGCTTG---CGCCTACTTCTAATTGCG---------------------------------------------------------------ACATGG---------GGCGTCTATCCAATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYADW--------LLTVPLLLVEVIAVLAL---A-KEVSK-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------ILY-GVLSTLPFLYILYVL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYPI------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HE646828 [Actinorhodopsin] clone_QitNWEx5_1_HE646828 gi|363805822|gb|HE646828| Uncultured bacterium partial actR gene for Actinorhodopsin, clone QitNWEx5.1. Uncultured bacterium partial actR gene for Actinorhodopsin, clone QitNWEx5.1. HE646828 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 19-nov-12 2010 Lake Stechlin surface water other freshwater 53.17 13.03 Environmental actinorhodopsin expression revealed by a new in situ filtration and fixation sampler Wurzbacher,C., Salka,I. and Grossart,H.P. Environ Microbiol Rep 4 (5), 491-497 (2012) 23760893 acI-like TATAGATACGTAGACTGGCTATTAACTGTTCCTCTACTTCTAGTTGAAGTAATTGCAGTGCTTGCACTTGCAAAGGAAGTTTCAAAGTCACTTATCGCTCGTTTGGTTCCAGCTTCAGCTGCGATGATCGCACTTGGTTATCCAGGTGAAATCTCAAACGATCAGAACACGCAGATCATGTACGGTGTTCTATCAACACTTCCATTCCTATACATCCTTTACGTACTATTCGTAGAGCTTGGTAAGTCACTAGATCGTCAACCAGAAGGTGTTGCAGCAACCATCGGTCGCTTGCGCCTACTTCTAATTGCGACATGGGGCGTATACCCGATA YRYVDWLLTVPLLLVEVIAVLALAKEVSKSLIARLVPASAAMIALGYPGEISNDQNTQIMYGVLSTLPFLYILYVLFVELGKSLDRQPEGVAATIGRLRLLLIATWGVYPI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAGATACGTAGACTGG------------------------CTATTAACTGTTCCTCTACTTCTAGTTGAAGTAATTGCAGTGCTTGCACTT---------GCA---AAGGAAGTTTCAAAG---TCACTT------------------------------------ATCGCTCGT---TTGGTTCCAGCTTCAGCTGCGATGATCGCACTTGGTTATCCAGGTGAA---------ATC------------------------------------------------------------------------------TCA---AACGAT---------CAG---------------------------AACACGCAG------------------ATCATGTAC---GGTGTTCTATCAACACTTCCATTCCTATACATCCTTTACGTACTA---------------TTC------GTA---GAGCTTGGTAAGTCACTAGATCGTCAA---------------CCAGAAGGTGTT---GCA---GCA---ACC---ATC---GGT---CGCTTG---CGCCTACTTCTAATTGCG---------------------------------------------------------------ACATGG---------GGCGTATACCCGATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYVDW--------LLTVPLLLVEVIAVLAL---A-KEVSK-SL------------IAR-LVPASAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------IMY-GVLSTLPFLYILYVL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVYPI------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HE646820 [Actinorhodopsin] clone_QitNWEx5_HE646820 gi|363805806|gb|HE646820| Uncultured bacterium partial actR gene for Actinorhodopsin, clone QitNWEx5. Uncultured bacterium partial actR gene for Actinorhodopsin, clone QitNWEx5. HE646820 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 19-nov-12 2010 Lake Stechlin surface water other freshwater 53.17 13.03 Environmental actinorhodopsin expression revealed by a new in situ filtration and fixation sampler Wurzbacher,C., Salka,I. and Grossart,H.P. Environ Microbiol Rep 4 (5), 491-497 (2012) 23760893 acI-like TATAGATACGTAGACTGGCTATTAACTGTTCCTCTACTTCTAGTTGAAGTAATTGCAGTGCTTGCACTTGCAAAGGAAGTTTCAAAGTCACTTATCGCTCGTTTGGTTCCAGCTTCAGCTGCGATGATCGCACTTGGTTATCCAGGTGAAATCTCAAACGATCAGAACACGCAGATCATGTACGGTGTTCTATCAACACTTCCATTCCTATACATCCTTTACGTACTATTCGTAGAGCTTGGTAAGTCACTAGATCGTCAACCAGAAGGTGTTGCAGCAACCATCGGTCGCTTGCGCCTACTTCTAATTGCGACATGGGGCGTATACCCGATA YRYVDWLLTVPLLLVEVIAVLALAKEVSKSLIARLVPASAAMIALGYPGEISNDQNTQIMYGVLSTLPFLYILYVLFVELGKSLDRQPEGVAATIGRLRLLLIATWGVYPI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAGATACGTAGACTGG------------------------CTATTAACTGTTCCTCTACTTCTAGTTGAAGTAATTGCAGTGCTTGCACTT---------GCA---AAGGAAGTTTCAAAG---TCACTT------------------------------------ATCGCTCGT---TTGGTTCCAGCTTCAGCTGCGATGATCGCACTTGGTTATCCAGGTGAA---------ATC------------------------------------------------------------------------------TCA---AACGAT---------CAG---------------------------AACACGCAG------------------ATCATGTAC---GGTGTTCTATCAACACTTCCATTCCTATACATCCTTTACGTACTA---------------TTC------GTA---GAGCTTGGTAAGTCACTAGATCGTCAA---------------CCAGAAGGTGTT---GCA---GCA---ACC---ATC---GGT---CGCTTG---CGCCTACTTCTAATTGCG---------------------------------------------------------------ACATGG---------GGCGTATACCCGATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYVDW--------LLTVPLLLVEVIAVLAL---A-KEVSK-SL------------IAR-LVPASAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------IMY-GVLSTLPFLYILYVL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVYPI------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HE646878 [Actinorhodopsin] clone_QiyNWEx7_HE646878 gi|363805922|gb|HE646878| Uncultured bacterium partial actR gene for Actinorhodopsin, clone QiyNWEx7. Uncultured bacterium partial actR gene for Actinorhodopsin, clone QiyNWEx7. HE646878 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 19-nov-12 2010 Lake Stechlin surface water other freshwater 53.17 13.03 Environmental actinorhodopsin expression revealed by a new in situ filtration and fixation sampler Wurzbacher,C., Salka,I. and Grossart,H.P. Environ Microbiol Rep 4 (5), 491-497 (2012) 23760893 acI-like TATCGTTATGTTGACTGGCTACTAACTGTTCCTCTACTTCTAGTTGAAGTAATTGCAGTGCTTGCACTTGCAAAGGAAGTTTCAAAGTCACTTATCGCTCGTTTGGCTCCAGCTTCAGCTGCGATGATCGCACTTGGTTATCCAGGTGAAATCTCAAACGATCAGAACACACAGATCATGTACGGTGTTCTATCAACACTTCCATTCCTATACATCCTTTACGTACTATTCGTAGAGCTTGGTAAGTCACTAGATCGTCAACCAGAAGGTGTTGCAGCAACCATCGGTCGCTTGCGCCTACTTCTAATTGCGACATGGGGCGTCTATCCAATA YRYVDWLLTVPLLLVEVIAVLALAKEVSKSLIARLAPASAAMIALGYPGEISNDQNTQIMYGVLSTLPFLYILYVLFVELGKSLDRQPEGVAATIGRLRLLLIATWGVYPI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCGTTATGTTGACTGG------------------------CTACTAACTGTTCCTCTACTTCTAGTTGAAGTAATTGCAGTGCTTGCACTT---------GCA---AAGGAAGTTTCAAAG---TCACTT------------------------------------ATCGCTCGT---TTGGCTCCAGCTTCAGCTGCGATGATCGCACTTGGTTATCCAGGTGAA---------ATC------------------------------------------------------------------------------TCA---AACGAT---------CAG---------------------------AACACACAG------------------ATCATGTAC---GGTGTTCTATCAACACTTCCATTCCTATACATCCTTTACGTACTA---------------TTC------GTA---GAGCTTGGTAAGTCACTAGATCGTCAA---------------CCAGAAGGTGTT---GCA---GCA---ACC---ATC---GGT---CGCTTG---CGCCTACTTCTAATTGCG---------------------------------------------------------------ACATGG---------GGCGTCTATCCAATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYVDW--------LLTVPLLLVEVIAVLAL---A-KEVSK-SL------------IAR-LAPASAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------IMY-GVLSTLPFLYILYVL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVYPI------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663762 [Actinorhodopsin] SCGC_AAA028G02_Actinobacteria_HQ663762 gi|325163123|gb|HQ663762| Actinobacterium SCGC AAA028G02 rhodopsin gene, partial cds Actinobacterium SCGC AAA028G02 rhodopsin gene, partial cds HQ663762 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938454 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Mendota other freshwater 46.0095 -89.7006 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) GGGCTCTTAACTGTTCCTCTACTTCTAGTTGAAGTAATTGCAGTGCTTGCACTTGCAAAGGAAGTTTCAAAGTCACTTATCGCTCGTTTGGTTCCAGCTTCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAAATCTCAAACGATCAGAACACACAGATCATGTACGGTGTTCTTTCAACACTTCCATTCCTATACATCCTTTACGTACTATTCGTAGAGCTTGGTAAGTCACTTGATCGTCAACCAGAAGGTGTTGCAGCAACCATCGGTCGCTTGCGCCTACTTCTAGTTGCGACATGGGGAGTGTACCCTATGGTCATA GLLTVPLLLVEVIAVLALAKEVSKSLIARLVPASAAMIALGYPGEISNDQNTQIMYGVLSTLPFLYILYVLFVELGKSLDRQPEGVAATIGRLRLLLVATWGVYPMVI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGG------------------------CTCTTAACTGTTCCTCTACTTCTAGTTGAAGTAATTGCAGTGCTTGCACTT---------GCA---AAGGAAGTTTCAAAG---TCACTT------------------------------------ATCGCTCGT---TTGGTTCCAGCTTCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAA---------ATC------------------------------------------------------------------------------TCA---AACGAT---------CAG---------------------------AACACACAG------------------ATCATGTAC---GGTGTTCTTTCAACACTTCCATTCCTATACATCCTTTACGTACTA---------------TTC------GTA---GAGCTTGGTAAGTCACTTGATCGTCAA---------------CCAGAAGGTGTT---GCA---GCA---ACC---ATC---GGT---CGCTTG---CGCCTACTTCTAGTTGCG---------------------------------------------------------------ACATGG---------GGAGTGTACCCTATGGTCATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G--------LLTVPLLLVEVIAVLAL---A-KEVSK-SL------------IAR-LVPASAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------IMY-GVLSTLPFLYILYVL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-I-G-RL-RLLLVA---------------------TW---GVYPMVI----------------------------------------------------------------------------------------------- [Actinorhodopsin]_FJ545172 [Actinorhodopsin] clone_Erie_LG_A1_rhodopsin_gene_partial_cds_FJ545172 gi|224384019|gb|FJ545172| Uncultured microorganism clone Erie.LG.A1 putative rhodopsin gene, partial cds. Uncultured microorganism clone Erie.LG.A1 putative rhodopsin gene, partial cds. FJ545172 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juil-05 Lake Erie other freshwater 41.9461 -81.6461 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTACTAACTGTTCCTCTACTTCTAGTAGAAGTAATTGCAGTGCTTGCACTTGCAAAGGAGGTTTCACGTTCACTTATCACTCGTTTGGTTCCAGCATCAGCTGCAATGATCGCACTTGGTTATCCAGGTGAAATCTCAAACGATCAGAACACACAGATAATGTACGGTGTTCTATCAACACTTCCATTCCTATACATCCTCTACATCCTATTCGTAGAGCTTGGTAAGTCACTAGATCGTCAACCAGAAGGTGTTGCAGCAACCGTTGGTCGCTTGCGCCTACTTCTAATTGCGACA LLTVPLLLVEVIAVLALAKEVSRSLITRLVPASAAMIALGYPGEISNDQNTQIMYGVLSTLPFLYILYILFVELGKSLDRQPEGVAATVGRLRLLLIAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTAACTGTTCCTCTACTTCTAGTAGAAGTAATTGCAGTGCTTGCACTT---------GCA---AAGGAGGTTTCACGT---TCACTT------------------------------------ATCACTCGT---TTGGTTCCAGCATCAGCTGCAATGATCGCACTTGGTTATCCAGGTGAA---------ATC------------------------------------------------------------------------------TCA---AACGAT---------CAG---------------------------AACACACAG------------------ATAATGTAC---GGTGTTCTATCAACACTTCCATTCCTATACATCCTCTACATCCTA---------------TTC------GTA---GAGCTTGGTAAGTCACTAGATCGTCAA---------------CCAGAAGGTGTT---GCA---GCA---ACC---GTT---GGT---CGCTTG---CGCCTACTTCTAATTGCG---------------------------------------------------------------ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------IMY-GVLSTLPFLYILYIL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_FJ545147 [Actinorhodopsin] clone_Superior_LG_C2_rhodopsin_gene_partial_cds_FJ545147 gi|224383969|gb|FJ545147| Uncultured microorganism clone Superior.LG.C2 putative rhodopsin gene, partial cds. Uncultured microorganism clone Superior.LG.C2 putative rhodopsin gene, partial cds. FJ545147 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juin-05 Lake Superior other freshwater 47.3 -91.67 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTACTAACTGTTCCTCTACTTCTAGTAGAAGTAATTGCAGTGCTTGCACTTGCAAAGGAAGTTTCACGTTCACTTATCACTCGTTTGGTTCCAGCATCAGCTGCAATGATCGCACTTGGTTATCCAGGTGAAATCTCAAACGATCAGAACACACAGATAATGTACGGTGTTCTATCAACACTTCCATTCCTATACATCCTCTACATCCTATTCGTAGAGCTTGGTAAGTCACTAGATCGTCAACCAGAAGGTGTTGCAGCAACCGTTGGTCGCTTGCGCCTACTTCTAATTGCGACA LLTVPLLLVEVIAVLALAKEVSRSLITRLVPASAAMIALGYPGEISNDQNTQIMYGVLSTLPFLYILYILFVELGKSLDRQPEGVAATVGRLRLLLIAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTAACTGTTCCTCTACTTCTAGTAGAAGTAATTGCAGTGCTTGCACTT---------GCA---AAGGAAGTTTCACGT---TCACTT------------------------------------ATCACTCGT---TTGGTTCCAGCATCAGCTGCAATGATCGCACTTGGTTATCCAGGTGAA---------ATC------------------------------------------------------------------------------TCA---AACGAT---------CAG---------------------------AACACACAG------------------ATAATGTAC---GGTGTTCTATCAACACTTCCATTCCTATACATCCTCTACATCCTA---------------TTC------GTA---GAGCTTGGTAAGTCACTAGATCGTCAA---------------CCAGAAGGTGTT---GCA---GCA---ACC---GTT---GGT---CGCTTG---CGCCTACTTCTAATTGCG---------------------------------------------------------------ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------IMY-GVLSTLPFLYILYIL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_FJ545173 [Actinorhodopsin] clone_Erie_LG_B1_rhodopsin_gene_partial_cds_FJ545173 gi|224384021|gb|FJ545173| Uncultured microorganism clone Erie.LG.B1 putative rhodopsin gene, partial cds. Uncultured microorganism clone Erie.LG.B1 putative rhodopsin gene, partial cds. FJ545173 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juil-05 Lake Erie other freshwater 41.9461 -81.6461 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTACTAACTGTCCCTCTACTTCTAGTAGAAGTAATTGCAGTGCTTGCACTTGCAAAGGAAGTTTCACGTTCACTTATCACTCGTTTGGTTCCAGCGTCAGCTGCAATGATCGCACTTGGTTATCCAGGTGAAATCTCAAACGATCAGAACACACAGATAATGTACGGTGTTCTATCAACACTTCCATTCCTATACATCCTCTATATCCTATTCGTAGAGCTTGGTAAGTCACTAGATCGTCAACCAGAAGGTGTTGCAGCAACCGTTGGTCGCTTGCGCCTACTTCTAATTGCGACT LLTVPLLLVEVIAVLALAKEVSRSLITRLVPASAAMIALGYPGEISNDQNTQIMYGVLSTLPFLYILYILFVELGKSLDRQPEGVAATVGRLRLLLIAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTAACTGTCCCTCTACTTCTAGTAGAAGTAATTGCAGTGCTTGCACTT---------GCA---AAGGAAGTTTCACGT---TCACTT------------------------------------ATCACTCGT---TTGGTTCCAGCGTCAGCTGCAATGATCGCACTTGGTTATCCAGGTGAA---------ATC------------------------------------------------------------------------------TCA---AACGAT---------CAG---------------------------AACACACAG------------------ATAATGTAC---GGTGTTCTATCAACACTTCCATTCCTATACATCCTCTATATCCTA---------------TTC------GTA---GAGCTTGGTAAGTCACTAGATCGTCAA---------------CCAGAAGGTGTT---GCA---GCA---ACC---GTT---GGT---CGCTTG---CGCCTACTTCTAATTGCG---------------------------------------------------------------ACT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------IMY-GVLSTLPFLYILYIL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663811 [Actinorhodopsin] SCGC_AAA044O16_Actinobacteria_HQ663811 gi|325163219|gb|HQ663811| Actinobacterium SCGC AAA044O16 rhodopsin gene, partial cds Actinobacterium SCGC AAA044O16 rhodopsin gene, partial cds HQ663811 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938537 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) GTAGATTGGCTACTAACTGTTCCACTACTTCTAGTTGAAGTAATTGCAGTGCTTGCACTTGCAAAGGAAATCTCACGGTCACTCATCACTCGTTTGGTTCCAGCATCAGCTGCAATGATCGCACTTGGTTACCCAGGTGAAATCTCAAACGACCAGAACACACAGATCCTTTACGGTGTTCTATCAACACTTCCATTCCTATACATCCTTTATGTTCTATTCGTAGAACTAGGCAAGTCACTTGATCGTCAACCTGATGGAGTTGCAGCAACCGTTGGTCGCTTGCGCCTACTTCTAATTGCGACATGGGGCGTCTACCCGATGGTC VDWLLTVPLLLVEVIAVLALAKEISRSLITRLVPASAAMIALGYPGEISNDQNTQILYGVLSTLPFLYILYVLFVELGKSLDRQPDGVAATVGRLRLLLIATWGVYPMV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGATTGG------------------------CTACTAACTGTTCCACTACTTCTAGTTGAAGTAATTGCAGTGCTTGCACTT---------GCA---AAGGAAATCTCACGG---TCACTC------------------------------------ATCACTCGT---TTGGTTCCAGCATCAGCTGCAATGATCGCACTTGGTTACCCAGGTGAA---------ATC------------------------------------------------------------------------------TCA---AACGAC---------CAG---------------------------AACACACAG------------------ATCCTTTAC---GGTGTTCTATCAACACTTCCATTCCTATACATCCTTTATGTTCTA---------------TTC------GTA---GAACTAGGCAAGTCACTTGATCGTCAA---------------CCTGATGGAGTT---GCA---GCA---ACC---GTT---GGT---CGCTTG---CGCCTACTTCTAATTGCG---------------------------------------------------------------ACATGG---------GGCGTCTACCCGATGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LLTVPLLLVEVIAVLAL---A-KEISR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------ILY-GVLSTLPFLYILYVL-----F--V-ELGKSLDRQ-----PDGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYPMV------------------------------------------------------------------------------------------------ [Actinorhodopsin]_HQ663834 [Actinorhodopsin] SCGC_AAA278P08_Actinobacteria_HQ663834 gi|325163264|gb|HQ663834| Actinobacterium SCGC AAA278P08 rhodopsin gene, partial cds Actinobacterium SCGC AAA278P08 rhodopsin gene, partial cds HQ663834 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938584 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTTGATTGGCTTCTAACTGTTCCACTACTTCTAGTTGAAGTAATTGCAGTACTTGCACTTGCAAAGGAAGTTTCACGTTCACTAATCACTCGTTTGGTTCCAGCATCAGCTGCAATGATCGCACTTGGCTACCCAGGTGAAATCTCAAACGATCAGAACACACAGATCCTTTACGGTGTTCTTTCAACACTTCCATTCCTATACATCCTCTACGTACTATTCGTAGAACTTGGTAAGTCACTAGATCGTCAACCAGAAGGTGTAGCAGCAACCGTTGGTCGCTTGCGCCTACTTCTAATTGCGACATGGGGCGTCTACCCGATGGTC YVDWLLTVPLLLVEVIAVLALAKEVSRSLITRLVPASAAMIALGYPGEISNDQNTQILYGVLSTLPFLYILYVLFVELGKSLDRQPEGVAATVGRLRLLLIATWGVYPMV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTTGATTGG------------------------CTTCTAACTGTTCCACTACTTCTAGTTGAAGTAATTGCAGTACTTGCACTT---------GCA---AAGGAAGTTTCACGT---TCACTA------------------------------------ATCACTCGT---TTGGTTCCAGCATCAGCTGCAATGATCGCACTTGGCTACCCAGGTGAA---------ATC------------------------------------------------------------------------------TCA---AACGAT---------CAG---------------------------AACACACAG------------------ATCCTTTAC---GGTGTTCTTTCAACACTTCCATTCCTATACATCCTCTACGTACTA---------------TTC------GTA---GAACTTGGTAAGTCACTAGATCGTCAA---------------CCAGAAGGTGTA---GCA---GCA---ACC---GTT---GGT---CGCTTG---CGCCTACTTCTAATTGCG---------------------------------------------------------------ACATGG---------GGCGTCTACCCGATGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------ILY-GVLSTLPFLYILYVL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYPMV------------------------------------------------------------------------------------------------ [Actinorhodopsin]_HE646832 [Actinorhodopsin] clone_QiuNWEx5_HE646832 gi|363805830|gb|HE646832| Uncultured bacterium partial actR gene for Actinorhodopsin, clone QiuNWEx5. Uncultured bacterium partial actR gene for Actinorhodopsin, clone QiuNWEx5. HE646832 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 19-nov-12 2010 Lake Stechlin surface water other freshwater 53.17 13.03 Environmental actinorhodopsin expression revealed by a new in situ filtration and fixation sampler Wurzbacher,C., Salka,I. and Grossart,H.P. Environ Microbiol Rep 4 (5), 491-497 (2012) 23760893 acI-like TATCGATATGTGGACTGGCTATTAACTGTTCCTCTACTTCTAGTTGAAGTAATTGCAGTGCTTGCACTTGCAAAGGAAATTTCACGGTCACTTATCACTCGTTTGGTTCCAGCATCAGCTGCAATGATCGCACTTGGTTATCCAGGTGAAATCTCAAACGATCAGAACACACAGATTATGTACGGTGTTCTTTCAACACTTCCATTCCTATACATCCTCTACGTACTATTCGTAGAGCTAGGTAAGTCACTTGAGCGTCAGCCAGAAGGAGTTGCAGCAACTGTTGGTCGCCTGCGCCTACTACTGATCGCAACATGGGGCGTCTATCCGATA YRYVDWLLTVPLLLVEVIAVLALAKEISRSLITRLVPASAAMIALGYPGEISNDQNTQIMYGVLSTLPFLYILYVLFVELGKSLERQPEGVAATVGRLRLLLIATWGVYPI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCGATATGTGGACTGG------------------------CTATTAACTGTTCCTCTACTTCTAGTTGAAGTAATTGCAGTGCTTGCACTT---------GCA---AAGGAAATTTCACGG---TCACTT------------------------------------ATCACTCGT---TTGGTTCCAGCATCAGCTGCAATGATCGCACTTGGTTATCCAGGTGAA---------ATC------------------------------------------------------------------------------TCA---AACGAT---------CAG---------------------------AACACACAG------------------ATTATGTAC---GGTGTTCTTTCAACACTTCCATTCCTATACATCCTCTACGTACTA---------------TTC------GTA---GAGCTAGGTAAGTCACTTGAGCGTCAG---------------CCAGAAGGAGTT---GCA---GCA---ACT---GTT---GGT---CGCCTG---CGCCTACTACTGATCGCA---------------------------------------------------------------ACATGG---------GGCGTCTATCCGATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYVDW--------LLTVPLLLVEVIAVLAL---A-KEISR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------IMY-GVLSTLPFLYILYVL-----F--V-ELGKSLERQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYPI------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HE646874 [Actinorhodopsin] clone_QiyNWExp1_HE646874 gi|363805914|gb|HE646874| Uncultured bacterium partial actR gene for Actinorhodopsin, clone QiyNWExp.1. Uncultured bacterium partial actR gene for Actinorhodopsin, clone QiyNWExp.1. HE646874 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 19-nov-12 2010 Lake Stechlin surface water other freshwater 53.17 13.03 Environmental actinorhodopsin expression revealed by a new in situ filtration and fixation sampler Wurzbacher,C., Salka,I. and Grossart,H.P. Environ Microbiol Rep 4 (5), 491-497 (2012) 23760893 acI-like TACCGTTATGCTGACTGGCTATTGACTGTACCTCTACTACTAGTAGAAGTTATTGCAGTACTTGCACTAACAGCTGCAGTTTCAAAGTCACTAATTATGCGCCTTGTTCCAGCATCAGCTGCAATGATCGCACTTGGTTACCCAGGTGAAATTTCAGATGTTCAGAACACACAGGTTCTATACGGTGTTCTTTCAACAATCCCATTCCTATACATCCTTTATGTTCTATTCGTAGAGCTAGGTAAGTCTCTTGAGCGTCAGCCAGAAGGTGTAGCGGCAACAGTTGGTCGCCTACGTCTCCTACTGATTGCAACATGGGGCGTCTACCCAATA YRYADWLLTVPLLLVEVIAVLALTAAVSKSLIMRLVPASAAMIALGYPGEISDVQNTQVLYGVLSTIPFLYILYVLFVELGKSLERQPEGVAATVGRLRLLLIATWGVYPI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCGTTATGCTGACTGG------------------------CTATTGACTGTACCTCTACTACTAGTAGAAGTTATTGCAGTACTTGCACTA---------ACA---GCTGCAGTTTCAAAG---TCACTA------------------------------------ATTATGCGC---CTTGTTCCAGCATCAGCTGCAATGATCGCACTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---GATGTT---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGTGTTCTTTCAACAATCCCATTCCTATACATCCTTTATGTTCTA---------------TTC------GTA---GAGCTAGGTAAGTCTCTTGAGCGTCAG---------------CCAGAAGGTGTA---GCG---GCA---ACA---GTT---GGT---CGCCTA---CGTCTCCTACTGATTGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCAATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYADW--------LLTVPLLLVEVIAVLAL---T-AAVSK-SL------------IMR-LVPASAAMIALGYPGE---I--------------------------S-DV---Q---------NTQ------VLY-GVLSTIPFLYILYVL-----F--V-ELGKSLERQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYPI------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HE646869 [Actinorhodopsin] clone_QiyNWExp_HE646869 gi|363805904|gb|HE646869| Uncultured bacterium partial actR gene for Actinorhodopsin, clone QiyNWExp. Uncultured bacterium partial actR gene for Actinorhodopsin, clone QiyNWExp. HE646869 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 19-nov-12 2010 Lake Stechlin surface water other freshwater 53.17 13.03 Environmental actinorhodopsin expression revealed by a new in situ filtration and fixation sampler Wurzbacher,C., Salka,I. and Grossart,H.P. Environ Microbiol Rep 4 (5), 491-497 (2012) 23760893 acI-like TACCGTTATGCTGACTGGCTATTGACTGTACCTCTACTACTAGTAGAAGTTATTGCAGTACTTGCACTAACAGCTGCAGTTTCAAAGTCACTAATTATGCGCCTTGTTCCAGCATCAGCTGCAATGATCGCACTTGGTTACCCAGGTGAAATTTCAGATGTTCAGAACACACAGGTTCTATACGGTGTTCTTTCAACAATCCCATTCCTATACATCCTTTATGTTCTATTCGTAGAGCTAGGTAAGTCTCTTGAGCGTCAGCCAGAAGGTGTAGCGGCAACAGTTGGTCGCCTACGTCTCCTACTGATTGCAACATGGGGCGTCTACCCAATA YRYADWLLTVPLLLVEVIAVLALTAAVSKSLIMRLVPASAAMIALGYPGEISDVQNTQVLYGVLSTIPFLYILYVLFVELGKSLERQPEGVAATVGRLRLLLIATWGVYPI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCGTTATGCTGACTGG------------------------CTATTGACTGTACCTCTACTACTAGTAGAAGTTATTGCAGTACTTGCACTA---------ACA---GCTGCAGTTTCAAAG---TCACTA------------------------------------ATTATGCGC---CTTGTTCCAGCATCAGCTGCAATGATCGCACTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---GATGTT---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGTGTTCTTTCAACAATCCCATTCCTATACATCCTTTATGTTCTA---------------TTC------GTA---GAGCTAGGTAAGTCTCTTGAGCGTCAG---------------CCAGAAGGTGTA---GCG---GCA---ACA---GTT---GGT---CGCCTA---CGTCTCCTACTGATTGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCAATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYADW--------LLTVPLLLVEVIAVLAL---T-AAVSK-SL------------IMR-LVPASAAMIALGYPGE---I--------------------------S-DV---Q---------NTQ------VLY-GVLSTIPFLYILYVL-----F--V-ELGKSLERQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYPI------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HE646844 [Actinorhodopsin] clone_QivNWEx7_HE646844 gi|363805854|gb|HE646844| Uncultured bacterium partial actR gene for Actinorhodopsin, clone QivNWEx7. Uncultured bacterium partial actR gene for Actinorhodopsin, clone QivNWEx7. HE646844 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 19-nov-12 2010 Lake Stechlin surface water other freshwater 53.17 13.03 Environmental actinorhodopsin expression revealed by a new in situ filtration and fixation sampler Wurzbacher,C., Salka,I. and Grossart,H.P. Environ Microbiol Rep 4 (5), 491-497 (2012) 23760893 acI-like TATCGTTATGCGGACTGGCTATTGACTGTACCTCTACTACTAGTAGAAGTTATTGCAGTACTTGCACTAACAGCTGCAGTTTCAAAGTCACTAATCATGCGCCTTGTTCCAGCATCAGCTGCAATGATCGCACTTGGTTACCCAGGTGAAACTTCAGATGTTCAGAACACACAGGTTCTATACGGTGTTCTTTCAACAATCCCATTCCTATACATCCTTTATGTTCTATTCGTAGAGCTAGGTAAGTCTCTTGAGCGTCAGCCAGAAGGTGTAGCGGCAACAGTTGGTCGCCTACGTCTCCTACTGATTGCAACATGGGGCGTGTACCCTATA YRYADWLLTVPLLLVEVIAVLALTAAVSKSLIMRLVPASAAMIALGYPGETSDVQNTQVLYGVLSTIPFLYILYVLFVELGKSLERQPEGVAATVGRLRLLLIATWGVYPI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCGTTATGCGGACTGG------------------------CTATTGACTGTACCTCTACTACTAGTAGAAGTTATTGCAGTACTTGCACTA---------ACA---GCTGCAGTTTCAAAG---TCACTA------------------------------------ATCATGCGC---CTTGTTCCAGCATCAGCTGCAATGATCGCACTTGGTTACCCAGGTGAA---------ACT------------------------------------------------------------------------------TCA---GATGTT---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGTGTTCTTTCAACAATCCCATTCCTATACATCCTTTATGTTCTA---------------TTC------GTA---GAGCTAGGTAAGTCTCTTGAGCGTCAG---------------CCAGAAGGTGTA---GCG---GCA---ACA---GTT---GGT---CGCCTA---CGTCTCCTACTGATTGCA---------------------------------------------------------------ACATGG---------GGCGTGTACCCTATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYADW--------LLTVPLLLVEVIAVLAL---T-AAVSK-SL------------IMR-LVPASAAMIALGYPGE---T--------------------------S-DV---Q---------NTQ------VLY-GVLSTIPFLYILYVL-----F--V-ELGKSLERQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYPI------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HE646855 [Actinorhodopsin] clone_QiwNWEx8_HE646855 gi|363805876|gb|HE646855| Uncultured bacterium partial actR gene for Actinorhodopsin, clone QiwNWEx8. Uncultured bacterium partial actR gene for Actinorhodopsin, clone QiwNWEx8. HE646855 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 19-nov-12 2010 Lake Stechlin surface water other freshwater 53.17 13.03 Environmental actinorhodopsin expression revealed by a new in situ filtration and fixation sampler Wurzbacher,C., Salka,I. and Grossart,H.P. Environ Microbiol Rep 4 (5), 491-497 (2012) 23760893 acI-like TATCGTTATGCGGACTGGCTATTGACCGTACCTCTACTACTAGTAGAAGTTATTGCAGTACATGCACTAACAGCTGCAGTTTCAAAGTCACTAATTATGCGCCTTGTTCCAGCATCAGCTGCAATGATCGCACTTGGTTACCCAGGTGAAATTTCAGATGTTCAGAACACACAGGTTCTATACGGTGTTCTTTCAACAATCCCATTCCTATACATCCTTTATGTTCTATTCGTAGAGCTAGGTAAGTCTCTTGAGCGTCAGCCAGAAGGTGTAGCGGCAACAGTTGGTCGCCTACGTCTCCTACTGATTGCAACATGGGGAGTATACCCTATA YRYADWLLTVPLLLVEVIAVHALTAAVSKSLIMRLVPASAAMIALGYPGEISDVQNTQVLYGVLSTIPFLYILYVLFVELGKSLERQPEGVAATVGRLRLLLIATWGVYPI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCGTTATGCGGACTGG------------------------CTATTGACCGTACCTCTACTACTAGTAGAAGTTATTGCAGTACATGCACTA---------ACA---GCTGCAGTTTCAAAG---TCACTA------------------------------------ATTATGCGC---CTTGTTCCAGCATCAGCTGCAATGATCGCACTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---GATGTT---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGTGTTCTTTCAACAATCCCATTCCTATACATCCTTTATGTTCTA---------------TTC------GTA---GAGCTAGGTAAGTCTCTTGAGCGTCAG---------------CCAGAAGGTGTA---GCG---GCA---ACA---GTT---GGT---CGCCTA---CGTCTCCTACTGATTGCA---------------------------------------------------------------ACATGG---------GGAGTATACCCTATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYADW--------LLTVPLLLVEVIAVHAL---T-AAVSK-SL------------IMR-LVPASAAMIALGYPGE---I--------------------------S-DV---Q---------NTQ------VLY-GVLSTIPFLYILYVL-----F--V-ELGKSLERQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYPI------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HE646809 [Actinorhodopsin] clone_IofNWEx6_HE646809 gi|363805784|gb|HE646809| Uncultured bacterium partial actR gene for Actinorhodopsin, clone IofNWEx6. Uncultured bacterium partial actR gene for Actinorhodopsin, clone IofNWEx6. HE646809 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 19-nov-12 2010 Lake Stechlin surface water other freshwater 53.17 13.03 Environmental actinorhodopsin expression revealed by a new in situ filtration and fixation sampler Wurzbacher,C., Salka,I. and Grossart,H.P. Environ Microbiol Rep 4 (5), 491-497 (2012) 23760893 acI-like TACCGGTATGTGGACTGGCTATTGACTGTACCTCTACTACTAGTAGAAGTTATTGCAGTACTTGCACTAACAGCTGCAGTTTCAAAGTCACTAATTATGCGCCTTGTTCCAGCATCAGCTGCAATGATCGCACTTGGTTACCCAGGTGAAATTTCAGATGTTCAGAACACACAGGTTCTATACGGTGTTCTTTCAACAATCCCATTCCTATACATCCTTTATGTTCTATTCGTAGAGCTAGGTAAGTCTCTTGAGCGTCAGCCAGAAGGTGTAGCGGCAACAGTTGGTCGCCTACGTCTCCTACTGATTGCAACATGGGGCGTATATCCTATA YRYVDWLLTVPLLLVEVIAVLALTAAVSKSLIMRLVPASAAMIALGYPGEISDVQNTQVLYGVLSTIPFLYILYVLFVELGKSLERQPEGVAATVGRLRLLLIATWGVYPI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCGGTATGTGGACTGG------------------------CTATTGACTGTACCTCTACTACTAGTAGAAGTTATTGCAGTACTTGCACTA---------ACA---GCTGCAGTTTCAAAG---TCACTA------------------------------------ATTATGCGC---CTTGTTCCAGCATCAGCTGCAATGATCGCACTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---GATGTT---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGTGTTCTTTCAACAATCCCATTCCTATACATCCTTTATGTTCTA---------------TTC------GTA---GAGCTAGGTAAGTCTCTTGAGCGTCAG---------------CCAGAAGGTGTA---GCG---GCA---ACA---GTT---GGT---CGCCTA---CGTCTCCTACTGATTGCA---------------------------------------------------------------ACATGG---------GGCGTATATCCTATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYVDW--------LLTVPLLLVEVIAVLAL---T-AAVSK-SL------------IMR-LVPASAAMIALGYPGE---I--------------------------S-DV---Q---------NTQ------VLY-GVLSTIPFLYILYVL-----F--V-ELGKSLERQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYPI------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HE646865 [Actinorhodopsin] clone_QixNWEx8_HE646865 gi|363805896|gb|HE646865| Uncultured bacterium partial actR gene for Actinorhodopsin, clone QixNWEx8. Uncultured bacterium partial actR gene for Actinorhodopsin, clone QixNWEx8. HE646865 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 19-nov-12 2010 Lake Stechlin surface water other freshwater 53.17 13.03 Environmental actinorhodopsin expression revealed by a new in situ filtration and fixation sampler Wurzbacher,C., Salka,I. and Grossart,H.P. Environ Microbiol Rep 4 (5), 491-497 (2012) 23760893 acI-like TATAGGTATGTGGACTGGCTATTGACTGTACCTCTACTACTAGTAGAAGTTATTGCAGTACTTGCACTAACAGCTGCAGTTTCAAAGTCACTAATCATGCGCCTTGTTCCAGCATCAGCTGCAATGATCGCACTTGGTTACCCAGGTGAAATTTCAGATGTTCAGAACACACAGGTTCTATACGGTGTTCTTTCAACAATCCCATTCCTATACATCCTTTATGTTCTATTCGTAGAGCTAGGTAAGTCTCTTGAGCGTCAGCCAGAAGGTGTAGCGGCAACAGCTGGTCGCCTACGTCTCCTACTGATTGCAACATGGGGCGTATACCCGATA YRYVDWLLTVPLLLVEVIAVLALTAAVSKSLIMRLVPASAAMIALGYPGEISDVQNTQVLYGVLSTIPFLYILYVLFVELGKSLERQPEGVAATAGRLRLLLIATWGVYPI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAGGTATGTGGACTGG------------------------CTATTGACTGTACCTCTACTACTAGTAGAAGTTATTGCAGTACTTGCACTA---------ACA---GCTGCAGTTTCAAAG---TCACTA------------------------------------ATCATGCGC---CTTGTTCCAGCATCAGCTGCAATGATCGCACTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---GATGTT---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGTGTTCTTTCAACAATCCCATTCCTATACATCCTTTATGTTCTA---------------TTC------GTA---GAGCTAGGTAAGTCTCTTGAGCGTCAG---------------CCAGAAGGTGTA---GCG---GCA---ACA---GCT---GGT---CGCCTA---CGTCTCCTACTGATTGCA---------------------------------------------------------------ACATGG---------GGCGTATACCCGATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYVDW--------LLTVPLLLVEVIAVLAL---T-AAVSK-SL------------IMR-LVPASAAMIALGYPGE---I--------------------------S-DV---Q---------NTQ------VLY-GVLSTIPFLYILYVL-----F--V-ELGKSLERQ-----PEGV-A-A-T-A-G-RL-RLLLIA---------------------TW---GVYPI------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HE646875 [Actinorhodopsin] clone_QiyNWEx5_HE646875 gi|363805916|gb|HE646875| Uncultured bacterium partial actR gene for Actinorhodopsin, clone QiyNWEx5. Uncultured bacterium partial actR gene for Actinorhodopsin, clone QiyNWEx5. HE646875 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 19-nov-12 2010 Lake Stechlin surface water other freshwater 53.17 13.03 Environmental actinorhodopsin expression revealed by a new in situ filtration and fixation sampler Wurzbacher,C., Salka,I. and Grossart,H.P. Environ Microbiol Rep 4 (5), 491-497 (2012) 23760893 acI-like TATCGGTATGTTGATTGGCTATTGACTGTACCTCTACTACTAGTAGAAGTTATTGCAGTACTTGCACTAACAGCTGCAGTTTCAAAGTCACTAATTATGCGCCTTGTTCCAGCATCAGCTGCAATGATCGCACTTGGTTACCCAGGTGAAATTTCAGATGTTCAGAACACACAGGTTCTATACGGTGTTCTTTCAACAATCCCATTCCTATACATCCTTTATGTTCTATTCGTAGAGCTAGGTAAGTCTCTTGAGCGTCAGCCAGAAGGTGTAGCGGCAACAGTTGGTCGCCTACGTCTCCTACTGATTGCAACATGGGGAGTCTACCCGATA YRYVDWLLTVPLLLVEVIAVLALTAAVSKSLIMRLVPASAAMIALGYPGEISDVQNTQVLYGVLSTIPFLYILYVLFVELGKSLERQPEGVAATVGRLRLLLIATWGVYPI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCGGTATGTTGATTGG------------------------CTATTGACTGTACCTCTACTACTAGTAGAAGTTATTGCAGTACTTGCACTA---------ACA---GCTGCAGTTTCAAAG---TCACTA------------------------------------ATTATGCGC---CTTGTTCCAGCATCAGCTGCAATGATCGCACTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---GATGTT---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGTGTTCTTTCAACAATCCCATTCCTATACATCCTTTATGTTCTA---------------TTC------GTA---GAGCTAGGTAAGTCTCTTGAGCGTCAG---------------CCAGAAGGTGTA---GCG---GCA---ACA---GTT---GGT---CGCCTA---CGTCTCCTACTGATTGCA---------------------------------------------------------------ACATGG---------GGAGTCTACCCGATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYVDW--------LLTVPLLLVEVIAVLAL---T-AAVSK-SL------------IMR-LVPASAAMIALGYPGE---I--------------------------S-DV---Q---------NTQ------VLY-GVLSTIPFLYILYVL-----F--V-ELGKSLERQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYPI------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601724 [Actinorhodopsin] clone_22-8_KC601724 gi|523706442|gb|KC601724| Uncultured bacterium clone 22-8 actinorhodopsin gene, partial cds. Uncultured bacterium clone 22-8 actinorhodopsin gene, partial cds. KC601724 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 oligo-mesotrophic deep submontane freshwater lake other freshwater 47.82 13.38 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGCTACGTGGACTGGTTATTGACTGTACCTCTACTACTCGTAGAAGTTATTGCAGTACTAGCTCTAACAGCTTCAGTTTCACGCTCACTAATCATGCGTCTTGTTCCAGCATCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAAATTTCAGATGTTCAGGGAACTCAGGTTCTATACGGTGTTCTTTCAACAATCCCATTCCTATACATCCTTTATGTTCTATTCGTAGAACTAGGCAAGTCACTTGAGCGTCAGCCAGAAGGTGTAGCGGCAACAGTTGGTCGCCTACGTCTCCTACTGATTGCAACATGGGGAGTCTACCCCAT RYVDWLLTVPLLLVEVIAVLALTASVSRSLIMRLVPASAAMIALGYPGEISDVQGTQVLYGVLSTIPFLYILYVLFVELGKSLERQPEGVAATVGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTACGTGGACTGG------------------------TTATTGACTGTACCTCTACTACTCGTAGAAGTTATTGCAGTACTAGCTCTA---------ACA---GCTTCAGTTTCACGC---TCACTA------------------------------------ATCATGCGT---CTTGTTCCAGCATCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---GATGTT---------CAG---------------------------GGAACTCAG------------------GTTCTATAC---GGTGTTCTTTCAACAATCCCATTCCTATACATCCTTTATGTTCTA---------------TTC------GTA---GAACTAGGCAAGTCACTTGAGCGTCAG---------------CCAGAAGGTGTA---GCG---GCA---ACA---GTT---GGT---CGCCTA---CGTCTCCTACTGATTGCA---------------------------------------------------------------ACATGG---------GGAGTCTACCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLLLVEVIAVLAL---T-ASVSR-SL------------IMR-LVPASAAMIALGYPGE---I--------------------------S-DV---Q---------GTQ------VLY-GVLSTIPFLYILYVL-----F--V-ELGKSLERQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663731 [Actinorhodopsin] SCGC_AAA023N08_Gammaproteobacteria_HQ663731 gi|325163062|gb|HQ663731| Gamma proteobacterium SCGC AAA023N08 rhodopsin gene, partial cds Gamma proteobacterium SCGC AAA023N08 rhodopsin gene, partial cds HQ663731 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Gammaproteobacteria] taxon:938919 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Sparkling other freshwater 46.0095 -89.7006 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTAGATTGGCTATTGACTGTTCCTCTACTACTAGTAGAAGTTGTTGCAGTACTTGCACTAACAGCTGCAGTTTCACGCTCACTAATCATGCGCCTCGTTCCAGCTTCAGCTGCAATGATCGCACTTGGTTACCCAGGTGAAATTTCAGAGGTTCAGGGAACACAAATTCTGTTCGGTGTCCTTTCAACAATCCCATTCCTATACATCCTTTACGTTCTATTCGTAGAGCTAGGTAAGTCACTTGAGCGTCAGCCAGAAGGAGTTGCAAAATCTGTTGCTAACCTCCGTCTACTTCTTATCGCAACATGGGGCGTCTACCCGATGGTCATA YVDWLLTVPLLLVEVVAVLALTAAVSRSLIMRLVPASAAMIALGYPGEISEVQGTQILFGVLSTIPFLYILYVLFVELGKSLERQPEGVAKSVANLRLLLIATWGVYPMVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTAGATTGG------------------------CTATTGACTGTTCCTCTACTACTAGTAGAAGTTGTTGCAGTACTTGCACTA---------ACA---GCTGCAGTTTCACGC---TCACTA------------------------------------ATCATGCGC---CTCGTTCCAGCTTCAGCTGCAATGATCGCACTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---GAGGTT---------CAG---------------------------GGAACACAA------------------ATTCTGTTC---GGTGTCCTTTCAACAATCCCATTCCTATACATCCTTTACGTTCTA---------------TTC------GTA---GAGCTAGGTAAGTCACTTGAGCGTCAG---------------CCAGAAGGAGTT---GCA---AAA---TCT---GTT---GCT---AACCTC---CGTCTACTTCTTATCGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCGATGGTCATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLLVEVVAVLAL---T-AAVSR-SL------------IMR-LVPASAAMIALGYPGE---I--------------------------S-EV---Q---------GTQ------ILF-GVLSTIPFLYILYVL-----F--V-ELGKSLERQ-----PEGV-A-K-S-V-A-NL-RLLLIA---------------------TW---GVYPMVI----------------------------------------------------------------------------------------------- [Actinorhodopsin]_FJ545154 [Actinorhodopsin] clone_Superior_LGR_D1_rhodopsin_gene_partial_cds_FJ545154 gi|224383983|gb|FJ545154| Uncultured microorganism clone Superior.LGR.D1 putative rhodopsin gene, partial cds. Uncultured microorganism clone Superior.LGR.D1 putative rhodopsin gene, partial cds. FJ545154 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juin-05 Lake Superior other freshwater 47.3 -91.67 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTAACTGTTCCTCTACTACTAGTAGAAGTTATTGCAGTTCTTGCACTAGCTAAGGAAGTTTCACGCTCACTAATCACACGCCTTGTTCCAGCATCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAAATTTCAAGTGTCCAGAACACACAGGTTCTATACGGTGTTCTTTCAACAATTCCATTCATCTACATCCTTTACGTTCTATTCGTAGAGCTAGGTAAGTCACTTGATCGCCAGCCTGAAGGAGTTGCAGCAACCGTTGGTCGCCTGCGCCTACTTCTAATCGCGACA LTVPLLLVEVIAVLALAKEVSRSLITRLVPASAAMIALGYPGEISSVQNTQVLYGVLSTIPFIYILYVLFVELGKSLDRQPEGVAATVGRLRLLLIAT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAACTGTTCCTCTACTACTAGTAGAAGTTATTGCAGTTCTTGCACTA---------GCT---AAGGAAGTTTCACGC---TCACTA------------------------------------ATCACACGC---CTTGTTCCAGCATCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AGTGTC---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGTGTTCTTTCAACAATTCCATTCATCTACATCCTTTACGTTCTA---------------TTC------GTA---GAGCTAGGTAAGTCACTTGATCGCCAG---------------CCTGAAGGAGTT---GCA---GCA---ACC---GTT---GGT---CGCCTG---CGCCTACTTCTAATCGCG---------------------------------------------------------------ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTVPLLLVEVIAVLAL---A-KEVSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-SV---Q---------NTQ------VLY-GVLSTIPFIYILYVL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_FJ545145 [Actinorhodopsin] clone_Superior_LG_A2_rhodopsin_gene_partial_cds_FJ545145 gi|224383965|gb|FJ545145| Uncultured microorganism clone Superior.LG.A2 putative rhodopsin gene, partial cds. Uncultured microorganism clone Superior.LG.A2 putative rhodopsin gene, partial cds. FJ545145 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juin-05 Lake Superior other freshwater 47.3 -91.67 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTTCTAACTGTTCCTCTACTACTAGTAGAAGTTATTGCAGTTCTTGCACTAGCTAAGGAAGTTTCACGCTCACTAATCACACGCCTTGTTCCAGCATCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAAATTTCAAGTGTCCAGAACACACAGGTTCTATACGGTGTTCTTTCAACAATTCCATTCATCTACATCCTTTACGTTCTATTCGTAGAGCTAGGTAAGTCACTTGATCGCCAGCCTGAAGGAGTTGCAGCAACCGTTGGTCGCCTGCGCCTACTTCTAATCGCGACA LLTVPLLLVEVIAVLALAKEVSRSLITRLVPASAAMIALGYPGEISSVQNTQVLYGVLSTIPFIYILYVLFVELGKSLDRQPEGVAATVGRLRLLLIAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTAACTGTTCCTCTACTACTAGTAGAAGTTATTGCAGTTCTTGCACTA---------GCT---AAGGAAGTTTCACGC---TCACTA------------------------------------ATCACACGC---CTTGTTCCAGCATCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AGTGTC---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGTGTTCTTTCAACAATTCCATTCATCTACATCCTTTACGTTCTA---------------TTC------GTA---GAGCTAGGTAAGTCACTTGATCGCCAG---------------CCTGAAGGAGTT---GCA---GCA---ACC---GTT---GGT---CGCCTG---CGCCTACTTCTAATCGCG---------------------------------------------------------------ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-SV---Q---------NTQ------VLY-GVLSTIPFIYILYVL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HE646797 [Actinorhodopsin] clone_CfsNWEx4_HE646797 gi|363805760|gb|HE646797| Uncultured bacterium partial actR gene for Actinorhodopsin, clone CfsNWEx4. Uncultured bacterium partial actR gene for Actinorhodopsin, clone CfsNWEx4. HE646797 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 19-nov-12 2010 Lake Stechlin surface water other freshwater 53.17 13.03 Environmental actinorhodopsin expression revealed by a new in situ filtration and fixation sampler Wurzbacher,C., Salka,I. and Grossart,H.P. Environ Microbiol Rep 4 (5), 491-497 (2012) 23760893 acI-like TACCGTTATGTTGACTGGCTTCTAACTGTTCCTCTACTACTAGTAGAAGTTATTGCAGTACTAGCACTTGCTAAGGAAGTTTCACGCTCACTAATCACACGCCTTGTTCCAGCATCTGCTGCAATGATCGCTCTTGGTTACCCAGGTGAAATTTCAAGCGATCAGAACACACAGGTTCTATACGGTGTTCTATCAACAATTCCATTCATCTACATCCTTTACGTACTATTCGTAGAGCTTGGTAAGTCACTTGAGCGTCAGCCAGAAGGAGTTGCAGCAACCGTTGGTCGCCTGCGCCTACTACTGATCGCAACATGGGGCGTGTACCCGATA YRYVDWLLTVPLLLVEVIAVLALAKEVSRSLITRLVPASAAMIALGYPGEISSDQNTQVLYGVLSTIPFIYILYVLFVELGKSLERQPEGVAATVGRLRLLLIATWGVYPI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCGTTATGTTGACTGG------------------------CTTCTAACTGTTCCTCTACTACTAGTAGAAGTTATTGCAGTACTAGCACTT---------GCT---AAGGAAGTTTCACGC---TCACTA------------------------------------ATCACACGC---CTTGTTCCAGCATCTGCTGCAATGATCGCTCTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AGCGAT---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGTGTTCTATCAACAATTCCATTCATCTACATCCTTTACGTACTA---------------TTC------GTA---GAGCTTGGTAAGTCACTTGAGCGTCAG---------------CCAGAAGGAGTT---GCA---GCA---ACC---GTT---GGT---CGCCTG---CGCCTACTACTGATCGCA---------------------------------------------------------------ACATGG---------GGCGTGTACCCGATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYVDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-SD---Q---------NTQ------VLY-GVLSTIPFIYILYVL-----F--V-ELGKSLERQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYPI------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601725 [Actinorhodopsin] clone_25-3_KC601725 gi|523706444|gb|KC601725| Uncultured bacterium clone 25-3 actinorhodopsin gene, partial cds. Uncultured bacterium clone 25-3 actinorhodopsin gene, partial cds. KC601725 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 oligo-mesotrophic deep submontane freshwater lake other freshwater 47.82 13.38 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGATATGTTGACTGGCTTCTAACTGTTCCGCTACTACTAGTAGAAGTTATTGTAGTATTAGCACTTGCTAAGGAAGTTCCACGCTCACTAATCACACGCCTTGTTCCAGCATCTGCTGCAATGATCGCTCTTGGTTACCCAGGTGAAATTTCAAGCGACCAGAACACACAGGTTCTATACGGTGTCCTTTCAACAATTCCATTCATTTACATCCTTTACGTTCTATTCGTAGAGCTTGGTAAGTCACTTGAGCGTCAGCCAGAAGGAGTTGCAGCAACTGTTGGTCGCCTGCGCCTACTACTGATCGCAACATGGGGAGTTTATCCCAT RYVDWLLTVPLLLVEVIVVLALAKEVPRSLITRLVPASAAMIALGYPGEISSDQNTQVLYGVLSTIPFIYILYVLFVELGKSLERQPEGVAATVGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATATGTTGACTGG------------------------CTTCTAACTGTTCCGCTACTACTAGTAGAAGTTATTGTAGTATTAGCACTT---------GCT---AAGGAAGTTCCACGC---TCACTA------------------------------------ATCACACGC---CTTGTTCCAGCATCTGCTGCAATGATCGCTCTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AGCGAC---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGTGTCCTTTCAACAATTCCATTCATTTACATCCTTTACGTTCTA---------------TTC------GTA---GAGCTTGGTAAGTCACTTGAGCGTCAG---------------CCAGAAGGAGTT---GCA---GCA---ACT---GTT---GGT---CGCCTG---CGCCTACTACTGATCGCA---------------------------------------------------------------ACATGG---------GGAGTTTATCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLLLVEVIVVLAL---A-KEVPR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-SD---Q---------NTQ------VLY-GVLSTIPFIYILYVL-----F--V-ELGKSLERQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HE646807 [Actinorhodopsin] clone_IofNWEx4_HE646807 gi|363805780|gb|HE646807| Uncultured bacterium partial actR gene for Actinorhodopsin, clone IofNWEx4. Uncultured bacterium partial actR gene for Actinorhodopsin, clone IofNWEx4. HE646807 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 19-nov-12 2010 Lake Stechlin surface water other freshwater 53.17 13.03 Environmental actinorhodopsin expression revealed by a new in situ filtration and fixation sampler Wurzbacher,C., Salka,I. and Grossart,H.P. Environ Microbiol Rep 4 (5), 491-497 (2012) 23760893 acI-like TATCGATACGTGGACTGGCTTCTAACTGTTCCTCTACTACTAGTAGAAGTTATTGCAGTATTAGCACTTGCTAAGGAAGTTTCACGCTCACTAATCACACGCCTTGTTCCAGCATCTGCTGCAATGATCGCTCTTGGTTACCCAGGTGAAATTTCAAGCGACCAGAACACACAGGTTCTATACGGTGTTCTTTCAACAATTCCTTTCATCTACATCCTTTACGTACTATTCGTAGAGCTTGGTAAGTCACTTGAGCGTCAGCCAGAAGGAGTTGCAGCAACTGTTGGTCGCCTGCGCCTACTACTGATCGCAACATGGGGAGTCTACCCTATA YRYVDWLLTVPLLLVEVIAVLALAKEVSRSLITRLVPASAAMIALGYPGEISSDQNTQVLYGVLSTIPFIYILYVLFVELGKSLERQPEGVAATVGRLRLLLIATWGVYPI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCGATACGTGGACTGG------------------------CTTCTAACTGTTCCTCTACTACTAGTAGAAGTTATTGCAGTATTAGCACTT---------GCT---AAGGAAGTTTCACGC---TCACTA------------------------------------ATCACACGC---CTTGTTCCAGCATCTGCTGCAATGATCGCTCTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AGCGAC---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGTGTTCTTTCAACAATTCCTTTCATCTACATCCTTTACGTACTA---------------TTC------GTA---GAGCTTGGTAAGTCACTTGAGCGTCAG---------------CCAGAAGGAGTT---GCA---GCA---ACT---GTT---GGT---CGCCTG---CGCCTACTACTGATCGCA---------------------------------------------------------------ACATGG---------GGAGTCTACCCTATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYVDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-SD---Q---------NTQ------VLY-GVLSTIPFIYILYVL-----F--V-ELGKSLERQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYPI------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HE646836 [Actinorhodopsin] clone_QivNWExp_HE646836 gi|363805838|gb|HE646836| Uncultured bacterium partial actR gene for Actinorhodopsin, clone QivNWExp. Uncultured bacterium partial actR gene for Actinorhodopsin, clone QivNWExp. HE646836 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 19-nov-12 2010 Lake Stechlin surface water other freshwater 53.17 13.03 Environmental actinorhodopsin expression revealed by a new in situ filtration and fixation sampler Wurzbacher,C., Salka,I. and Grossart,H.P. Environ Microbiol Rep 4 (5), 491-497 (2012) 23760893 acI-like TATCGTTACGTGGACTGGCTTCTAACTGTTCCTCTACTACTAGTAGAAGTTATTGCAGTATTAGCACTTGCTAAGGAAGTTTCACGCTCACTAATCACACGCCTTGTTCCAGCATCTGCTGCAATGATCGCTCTTGGTTACCCAGGTGAAATTTCAAGCGACCAGAACACACAGGTTCTATACGGTGTTCTTTCAACAATTCCTTTCATCTACATCCTTTACGTACTATTCGTAGAGCTTGGTAAGTCACTTGAGCGTCAGCCAGAAGGAGTTGCAGCAACTGTTGGTCGCCTGCGCCTACTACTGATCGCAACATGGGGCGTATATCCTATA YRYVDWLLTVPLLLVEVIAVLALAKEVSRSLITRLVPASAAMIALGYPGEISSDQNTQVLYGVLSTIPFIYILYVLFVELGKSLERQPEGVAATVGRLRLLLIATWGVYPI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCGTTACGTGGACTGG------------------------CTTCTAACTGTTCCTCTACTACTAGTAGAAGTTATTGCAGTATTAGCACTT---------GCT---AAGGAAGTTTCACGC---TCACTA------------------------------------ATCACACGC---CTTGTTCCAGCATCTGCTGCAATGATCGCTCTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AGCGAC---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGTGTTCTTTCAACAATTCCTTTCATCTACATCCTTTACGTACTA---------------TTC------GTA---GAGCTTGGTAAGTCACTTGAGCGTCAG---------------CCAGAAGGAGTT---GCA---GCA---ACT---GTT---GGT---CGCCTG---CGCCTACTACTGATCGCA---------------------------------------------------------------ACATGG---------GGCGTATATCCTATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYVDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-SD---Q---------NTQ------VLY-GVLSTIPFIYILYVL-----F--V-ELGKSLERQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYPI------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HE646796 [Actinorhodopsin] clone_CfsNWEx3_HE646796 gi|363805758|gb|HE646796| Uncultured bacterium partial actR gene for Actinorhodopsin, clone CfsNWEx3. Uncultured bacterium partial actR gene for Actinorhodopsin, clone CfsNWEx3. HE646796 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 19-nov-12 2010 Lake Stechlin surface water other freshwater 53.17 13.03 Environmental actinorhodopsin expression revealed by a new in situ filtration and fixation sampler Wurzbacher,C., Salka,I. and Grossart,H.P. Environ Microbiol Rep 4 (5), 491-497 (2012) 23760893 acI-like TACCGTTATGCTGACTGGCTTCTAACTGTTCCTCTACTACTAGTAGAAGTTATTGCAGTATTAGCACTTGCTAAGGAAGTTTCACGCTCACTAATCACACGCCTTGTTCCAGCATCTGCTGCAATGATCGCTCTTGGTTACCCAGGTGAAATTTCAAGCGACCAGAACACACAGGTTCTATACGGTGTTCTTTCAACAATTCCTTTCATCTACATCCTTTACGTACTATTCGTAGAGCTTGGTAAGTCACTTGAGCGTCAGCCAGAAGGAGTTGCAGCAACTGTTGGTCGCCTGCGCCTACTACTGATCGCAACATGGGGCGTCTACCCGATA YRYADWLLTVPLLLVEVIAVLALAKEVSRSLITRLVPASAAMIALGYPGEISSDQNTQVLYGVLSTIPFIYILYVLFVELGKSLERQPEGVAATVGRLRLLLIATWGVYPI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCGTTATGCTGACTGG------------------------CTTCTAACTGTTCCTCTACTACTAGTAGAAGTTATTGCAGTATTAGCACTT---------GCT---AAGGAAGTTTCACGC---TCACTA------------------------------------ATCACACGC---CTTGTTCCAGCATCTGCTGCAATGATCGCTCTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AGCGAC---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGTGTTCTTTCAACAATTCCTTTCATCTACATCCTTTACGTACTA---------------TTC------GTA---GAGCTTGGTAAGTCACTTGAGCGTCAG---------------CCAGAAGGAGTT---GCA---GCA---ACT---GTT---GGT---CGCCTG---CGCCTACTACTGATCGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCGATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYADW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-SD---Q---------NTQ------VLY-GVLSTIPFIYILYVL-----F--V-ELGKSLERQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYPI------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601748 [Actinorhodopsin] clone_8-5_KC601748 gi|523706490|gb|KC601748| Uncultured bacterium clone 8-5 actinorhodopsin gene, partial cds. Uncultured bacterium clone 8-5 actinorhodopsin gene, partial cds. KC601748 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 oligo-mesotrophic deep submontane freshwater lake other freshwater 47.82 13.38 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGGTATGTGGATTGGCTTCTAACTGTTCCTCTACTACTAGTAGAAGTTATTGCAGTATTAGCACTTGCTAAGGAAGTTTCACGCTCACTAATCACACGCCTTGTTCCAGCATCTGCTGCAATGATCGCTCTTGGTTACCCAGGTGAAATTTCAAGCGACCAGAACACACAGGTTCTATACGGTGTTCTTTCAACAATTCCTTTCATCTATATCCTTTACGTACTATTCGTAGAGCTTGGTAAGTCACTTGAGCGTCAGCCAGAAGGAGTTGCAGCAACTGTTGGTCGCCTGCGCCTACTACTGATCGCAACATGGGGCGTCTACCCCAT RYVDWLLTVPLLLVEVIAVLALAKEVSRSLITRLVPASAAMIALGYPGEISSDQNTQVLYGVLSTIPFIYILYVLFVELGKSLERQPEGVAATVGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTATGTGGATTGG------------------------CTTCTAACTGTTCCTCTACTACTAGTAGAAGTTATTGCAGTATTAGCACTT---------GCT---AAGGAAGTTTCACGC---TCACTA------------------------------------ATCACACGC---CTTGTTCCAGCATCTGCTGCAATGATCGCTCTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AGCGAC---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGTGTTCTTTCAACAATTCCTTTCATCTATATCCTTTACGTACTA---------------TTC------GTA---GAGCTTGGTAAGTCACTTGAGCGTCAG---------------CCAGAAGGAGTT---GCA---GCA---ACT---GTT---GGT---CGCCTG---CGCCTACTACTGATCGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-SD---Q---------NTQ------VLY-GVLSTIPFIYILYVL-----F--V-ELGKSLERQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_FJ545187 [Actinorhodopsin] clone_Erie_LGR_A1_rhodopsin_gene_partial_cds_FJ545187 gi|224384049|gb|FJ545187| Uncultured microorganism clone Erie.LGR.A1 putative rhodopsin gene, partial cds. Uncultured microorganism clone Erie.LGR.A1 putative rhodopsin gene, partial cds. FJ545187 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juil-05 Lake Erie other freshwater 41.9461 -81.6461 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTAACTGTTCCTCTACTACTAGTAGAAGTTATTGCAGTACTAGCTCTAGCTAAGGAAGTTTCACGCTCACTTATCACACGCCTTGTTCCAGCATCTGCTGCAATGATCGCTCTTGGTTACCCAGGTGAAATTTCAAGCGACCAGAACACACAGGTTCTATACGGTGTTCTTTCAACAATTCCTTTCATCTACATCCTTTACGTACTATTCGTAGAGCTTGGTAAGTCACTTGAGCGTCAGCCAGAAGGAGTTGCAGCAACCGTTGGTCGCCTGCGCCTACTACTGATTGCAACA LTVPLLLVEVIAVLALAKEVSRSLITRLVPASAAMIALGYPGEISSDQNTQVLYGVLSTIPFIYILYVLFVELGKSLERQPEGVAATVGRLRLLLIAT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAACTGTTCCTCTACTACTAGTAGAAGTTATTGCAGTACTAGCTCTA---------GCT---AAGGAAGTTTCACGC---TCACTT------------------------------------ATCACACGC---CTTGTTCCAGCATCTGCTGCAATGATCGCTCTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AGCGAC---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGTGTTCTTTCAACAATTCCTTTCATCTACATCCTTTACGTACTA---------------TTC------GTA---GAGCTTGGTAAGTCACTTGAGCGTCAG---------------CCAGAAGGAGTT---GCA---GCA---ACC---GTT---GGT---CGCCTG---CGCCTACTACTGATTGCA---------------------------------------------------------------ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTVPLLLVEVIAVLAL---A-KEVSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-SD---Q---------NTQ------VLY-GVLSTIPFIYILYVL-----F--V-ELGKSLERQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_FJ545179 [Actinorhodopsin] clone_Erie_LG_A2_rhodopsin_gene_partial_cds_FJ545179 gi|224384033|gb|FJ545179| Uncultured microorganism clone Erie.LG.A2 putative rhodopsin gene, partial cds. Uncultured microorganism clone Erie.LG.A2 putative rhodopsin gene, partial cds. FJ545179 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juil-05 Lake Erie other freshwater 41.9461 -81.6461 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTTCTAACTGTTCCTCTACTACTAGTAGAAGTTATTGCAGTACTAGCTCTAGCTAAGGAAGTTTCACGCTCACTAATCACACGCCTTGTTCCAGCATCTGCTGCAATGATCGCTCTTGGTTACCCAGGTGAAATTCCAAGCGACCAGAACACACAGGTTCTATACGGTGTTCTTTCAACAATTCCTTTCATCTACATCCTTTACGTATTATTCGTAGAGCTTGGTAAGTCACTTGAGCGTCAGCCAGAAGGAGTTGCAGCAACCGTTGGTCGCCTGCGCCTACTACTGATCGCAACA LLTVPLLLVEVIAVLALAKEVSRSLITRLVPASAAMIALGYPGEIPSDQNTQVLYGVLSTIPFIYILYVLFVELGKSLERQPEGVAATVGRLRLLLIAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTAACTGTTCCTCTACTACTAGTAGAAGTTATTGCAGTACTAGCTCTA---------GCT---AAGGAAGTTTCACGC---TCACTA------------------------------------ATCACACGC---CTTGTTCCAGCATCTGCTGCAATGATCGCTCTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------CCA---AGCGAC---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGTGTTCTTTCAACAATTCCTTTCATCTACATCCTTTACGTATTA---------------TTC------GTA---GAGCTTGGTAAGTCACTTGAGCGTCAG---------------CCAGAAGGAGTT---GCA---GCA---ACC---GTT---GGT---CGCCTG---CGCCTACTACTGATCGCA---------------------------------------------------------------ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------P-SD---Q---------NTQ------VLY-GVLSTIPFIYILYVL-----F--V-ELGKSLERQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601745 [Actinorhodopsin] clone_8-2_KC601745 gi|523706484|gb|KC601745| Uncultured bacterium clone 8-2 actinorhodopsin gene, partial cds. Uncultured bacterium clone 8-2 actinorhodopsin gene, partial cds. KC601745 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 oligo-mesotrophic deep submontane freshwater lake other freshwater 47.82 13.38 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGGTATATTGATTGGCTTCTAACTGTTCCTCTACTACTAGTAGAAGTTATTGCAGTACTTGCACTAGCTAAGGAAGTTTCACGCTCACTAATCACACGCCTTGTTCCAGCATCTGCTGCAATGATCGCTCTTGGTTACCCAGGTGAAATTTCAAACGATCAGAACACACAGGTTCTATACGGTGTTCTATCAACACTTCCTTTCATCTACATCCTTTACGTACTATTCGTAGAGCTTGGTAAGTCACTTGATCGTCAGCCAGAAGGAGTTGCAGCAACTGTTGGTCGCCTGCGCCTACTACTGATCGCAACATGGGGCGTCTATCCCAT RYIDWLLTVPLLLVEVIAVLALAKEVSRSLITRLVPASAAMIALGYPGEISNDQNTQVLYGVLSTLPFIYILYVLFVELGKSLDRQPEGVAATVGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTATATTGATTGG------------------------CTTCTAACTGTTCCTCTACTACTAGTAGAAGTTATTGCAGTACTTGCACTA---------GCT---AAGGAAGTTTCACGC---TCACTA------------------------------------ATCACACGC---CTTGTTCCAGCATCTGCTGCAATGATCGCTCTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AACGAT---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGTGTTCTATCAACACTTCCTTTCATCTACATCCTTTACGTACTA---------------TTC------GTA---GAGCTTGGTAAGTCACTTGATCGTCAG---------------CCAGAAGGAGTT---GCA---GCA---ACT---GTT---GGT---CGCCTG---CGCCTACTACTGATCGCA---------------------------------------------------------------ACATGG---------GGCGTCTATCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------VLY-GVLSTLPFIYILYVL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HE646876 [Actinorhodopsin] clone_QiyNWEx6_HE646876 gi|363805918|gb|HE646876| Uncultured bacterium partial actR gene for Actinorhodopsin, clone QiyNWEx6. Uncultured bacterium partial actR gene for Actinorhodopsin, clone QiyNWEx6. HE646876 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 19-nov-12 2010 Lake Stechlin surface water other freshwater 53.17 13.03 Environmental actinorhodopsin expression revealed by a new in situ filtration and fixation sampler Wurzbacher,C., Salka,I. and Grossart,H.P. Environ Microbiol Rep 4 (5), 491-497 (2012) 23760893 acI-like TATCGTTACGCGGATTGGCTTCTAACTGTTCCTCTACTACTAGTAGAAGTTATTGCAGTATTAGCACTTGCTAAGGAAGTTTCACGCTCACTAATCACACGCCTTGTTCCAGCATCTGCTGCAATGATCGCTCTTGGTTACCCAGGTGAAATTTCAAACGATCAGAACACACAGGTTCTATACGGTGTTCTATCAACACTTCCTTTCATCTACATCCTTTACGTACTATTCGTAGAGCTTGGTAAGTCACTTGAGCGTCAGCCAGAAGGAGTTGCAGCAACCGTTGGTCGCCTGCGCCTACTACTGATCGCAACATGGGGCGTATATCCGATA YRYADWLLTVPLLLVEVIAVLALAKEVSRSLITRLVPASAAMIALGYPGEISNDQNTQVLYGVLSTLPFIYILYVLFVELGKSLERQPEGVAATVGRLRLLLIATWGVYPI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCGTTACGCGGATTGG------------------------CTTCTAACTGTTCCTCTACTACTAGTAGAAGTTATTGCAGTATTAGCACTT---------GCT---AAGGAAGTTTCACGC---TCACTA------------------------------------ATCACACGC---CTTGTTCCAGCATCTGCTGCAATGATCGCTCTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AACGAT---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGTGTTCTATCAACACTTCCTTTCATCTACATCCTTTACGTACTA---------------TTC------GTA---GAGCTTGGTAAGTCACTTGAGCGTCAG---------------CCAGAAGGAGTT---GCA---GCA---ACC---GTT---GGT---CGCCTG---CGCCTACTACTGATCGCA---------------------------------------------------------------ACATGG---------GGCGTATATCCGATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYADW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------VLY-GVLSTLPFIYILYVL-----F--V-ELGKSLERQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYPI------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663765 [Actinorhodopsin] SCGC_AAA028I14_Actinobacteria_HQ663765 gi|325163129|gb|HQ663765| Actinobacterium SCGC AAA028I14 rhodopsin gene, partial cds Actinobacterium SCGC AAA028I14 rhodopsin gene, partial cds HQ663765 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938457 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Mendota other freshwater 46.0095 -89.7006 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTAGATTGGCTTCTAACTGTTCCTCTACTACTAGTAGAAGTTATTGCAGTACTTGCACTAGCTAAGGAAGTTTCCCGCTCACTAATCACACGCCTAGTTCCAGCATCTGCTGCAATGATCGCTCTTGGTTACCCAGGTGAAATTTCAAACGATCAGAACACACAGGTTCTTTACGGTGTTCTATCGACACTTCCTTTCATCTACATCCTTTACGTACTATTCGTAGAGCTTGGTAAGTCACTTGAGCGTCAGCCAGAAGGTGTTGCAGCAACTGTTGGTCGCCTGCGCCTACTACTGATTGCTACATGGGGCGTTTACCCT YVDWLLTVPLLLVEVIAVLALAKEVSRSLITRLVPASAAMIALGYPGEISNDQNTQVLYGVLSTLPFIYILYVLFVELGKSLERQPEGVAATVGRLRLLLIATWGVYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTAGATTGG------------------------CTTCTAACTGTTCCTCTACTACTAGTAGAAGTTATTGCAGTACTTGCACTA---------GCT---AAGGAAGTTTCCCGC---TCACTA------------------------------------ATCACACGC---CTAGTTCCAGCATCTGCTGCAATGATCGCTCTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AACGAT---------CAG---------------------------AACACACAG------------------GTTCTTTAC---GGTGTTCTATCGACACTTCCTTTCATCTACATCCTTTACGTACTA---------------TTC------GTA---GAGCTTGGTAAGTCACTTGAGCGTCAG---------------CCAGAAGGTGTT---GCA---GCA---ACT---GTT---GGT---CGCCTG---CGCCTACTACTGATTGCT---------------------------------------------------------------ACATGG---------GGCGTTTACCCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------VLY-GVLSTLPFIYILYVL-----F--V-ELGKSLERQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601737 [Actinorhodopsin] clone_27-2_KC601737 gi|523706468|gb|KC601737| Uncultured bacterium clone 27-2 actinorhodopsin gene, partial cds. Uncultured bacterium clone 27-2 actinorhodopsin gene, partial cds. KC601737 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 oligo-mesotrophic deep submontane freshwater lake other freshwater 47.82 13.38 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGCTATGTGGACTGGCTTCTAACTGTTCCTCTACTACTAGTAGAGGTTATTGCAGTACTAGCTCTAGCTAAGGAAGTTTCACGCTCACTAATCACACGCCTTGTTCCAGCATCTGCTGCAATGATCGCTCTTGGTTACCCAGGTGAAATTTCAAACGATCAGAACACACAGGTTCTATACGGAGTTCTATCAACACTTCCTTTCATCTACATCCTTTACGTACTATTCGTAGAGCTTGGTAAGTCACTTGAGCGTCAGCCAGAAGGAGTTGCAGCAACCGTTGGTCGCCTGCGCCTACTACTGATCGCAACATGGGGCGTCTACCCGAT RYVDWLLTVPLLLVEVIAVLALAKEVSRSLITRLVPASAAMIALGYPGEISNDQNTQVLYGVLSTLPFIYILYVLFVELGKSLERQPEGVAATVGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTATGTGGACTGG------------------------CTTCTAACTGTTCCTCTACTACTAGTAGAGGTTATTGCAGTACTAGCTCTA---------GCT---AAGGAAGTTTCACGC---TCACTA------------------------------------ATCACACGC---CTTGTTCCAGCATCTGCTGCAATGATCGCTCTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AACGAT---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGAGTTCTATCAACACTTCCTTTCATCTACATCCTTTACGTACTA---------------TTC------GTA---GAGCTTGGTAAGTCACTTGAGCGTCAG---------------CCAGAAGGAGTT---GCA---GCA---ACC---GTT---GGT---CGCCTG---CGCCTACTACTGATCGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------VLY-GVLSTLPFIYILYVL-----F--V-ELGKSLERQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601749 [Actinorhodopsin] clone_8-8_KC601749 gi|523706492|gb|KC601749| Uncultured bacterium clone 8-8 actinorhodopsin gene, partial cds. Uncultured bacterium clone 8-8 actinorhodopsin gene, partial cds. KC601749 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 oligo-mesotrophic deep submontane freshwater lake other freshwater 47.82 13.38 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGGTACGTTGATTGGCTTCTAACTGTTCCTCTACTACTAGTAGAGGTTATTGCAGTACTAGCTCTAGCTAAGGAAGTTTCACGCTCACTAATCACACGCCTTGTTCCAGCATCTGCTGCAATGATCGCTCTTGGTTACCCAGGTGAAATTTCAAACGATCAGAACACACAGGTTCTATACGGAGTTCTATCAACACTTCCTTTCATCTACATCCTTTACGTACTATTCGTAGAGCTTGGTAAGTCACTTGAGCGTCAGCCAGAAGGAGTTGCAGCAACCGTTGGTCGCCTGCGCCTACTACTGATCGCAACATGGGGCGTCTATCCTAT RYVDWLLTVPLLLVEVIAVLALAKEVSRSLITRLVPASAAMIALGYPGEISNDQNTQVLYGVLSTLPFIYILYVLFVELGKSLERQPEGVAATVGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTACGTTGATTGG------------------------CTTCTAACTGTTCCTCTACTACTAGTAGAGGTTATTGCAGTACTAGCTCTA---------GCT---AAGGAAGTTTCACGC---TCACTA------------------------------------ATCACACGC---CTTGTTCCAGCATCTGCTGCAATGATCGCTCTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AACGAT---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGAGTTCTATCAACACTTCCTTTCATCTACATCCTTTACGTACTA---------------TTC------GTA---GAGCTTGGTAAGTCACTTGAGCGTCAG---------------CCAGAAGGAGTT---GCA---GCA---ACC---GTT---GGT---CGCCTG---CGCCTACTACTGATCGCA---------------------------------------------------------------ACATGG---------GGCGTCTATCCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------VLY-GVLSTLPFIYILYVL-----F--V-ELGKSLERQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663838 [Actinorhodopsin] SCGC_AAA280F13_Actinobacteria_HQ663838 gi|325163272|gb|HQ663838| Actinobacterium SCGC AAA280F13 rhodopsin gene, partial cds Actinobacterium SCGC AAA280F13 rhodopsin gene, partial cds HQ663838 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938597 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTGGATTGGCTACTAACAGTGCCTCTACTACTAGTAGAAGTTATTGCTGTACTAGCACTAGCTAAGGAAGTTTCACGCTCACTAATCATGCGTCTTGTACCAGCTTCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAAGTTTCAAACGATCAGAACACACAGGTTCTATACGGTGTTCTATCAACAATTCCATTCCTATACATCCTTTACGTCCTATTCGTAGAGCTTGGTAAGTCACTTGATCGTCAGCCTGAAGGAGTAGCGGCAACAGTTGGTCGCCTACGTCTTCTACTGATCGCAACATGGGGCGTCTACCCGATGGTCATAGCTTGTTTC YVDWLLTVPLLLVEVIAVLALAKEVSRSLIMRLVPASAAMIALGYPGEVSNDQNTQVLYGVLSTIPFLYILYVLFVELGKSLDRQPEGVAATVGRLRLLLIATWGVYPMVIACF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTGGATTGG------------------------CTACTAACAGTGCCTCTACTACTAGTAGAAGTTATTGCTGTACTAGCACTA---------GCT---AAGGAAGTTTCACGC---TCACTA------------------------------------ATCATGCGT---CTTGTACCAGCTTCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAA---------GTT------------------------------------------------------------------------------TCA---AACGAT---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGTGTTCTATCAACAATTCCATTCCTATACATCCTTTACGTCCTA---------------TTC------GTA---GAGCTTGGTAAGTCACTTGATCGTCAG---------------CCTGAAGGAGTA---GCG---GCA---ACA---GTT---GGT---CGCCTA---CGTCTTCTACTGATCGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCGATGGTCATAGCTTGTTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------IMR-LVPASAAMIALGYPGE---V--------------------------S-ND---Q---------NTQ------VLY-GVLSTIPFLYILYVL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYPMVIACF-------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663844 [Actinorhodopsin] SCGC_AAA487N03_Actinobacteria_HQ663844 gi|325163284|gb|HQ663844| Actinobacterium SCGC AAA487N03 rhodopsin gene, partial cds Actinobacterium SCGC AAA487N03 rhodopsin gene, partial cds HQ663844 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938611 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTAGATTGGCTACTAACAGTGCCTCTACTACTAGTAGAAGTTATTGCTGTACTAGCACTAGCTAAGGAAGTTTCACGCTCACTAATCATGCGTCTTGTACCAGCTTCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAAGTTTCAAACGATCAGAACACACAGGTTCTATACGGTGTTCTATCAACAATTCCATTCCTATACATCCTTTACGTCCTATTCGTAGAGCTTGGTAAGTCACTTGATCGTCAGCCTGAAGGAGTAGCGGCAACAGTTGGTCGCCTACGTCTTCTACTGATCGCAACATGGGGCGTCTAC YVDWLLTVPLLLVEVIAVLALAKEVSRSLIMRLVPASAAMIALGYPGEVSNDQNTQVLYGVLSTIPFLYILYVLFVELGKSLDRQPEGVAATVGRLRLLLIATWGVY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTAGATTGG------------------------CTACTAACAGTGCCTCTACTACTAGTAGAAGTTATTGCTGTACTAGCACTA---------GCT---AAGGAAGTTTCACGC---TCACTA------------------------------------ATCATGCGT---CTTGTACCAGCTTCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAA---------GTT------------------------------------------------------------------------------TCA---AACGAT---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGTGTTCTATCAACAATTCCATTCCTATACATCCTTTACGTCCTA---------------TTC------GTA---GAGCTTGGTAAGTCACTTGATCGTCAG---------------CCTGAAGGAGTA---GCG---GCA---ACA---GTT---GGT---CGCCTA---CGTCTTCTACTGATCGCA---------------------------------------------------------------ACATGG---------GGCGTCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------IMR-LVPASAAMIALGYPGE---V--------------------------S-ND---Q---------NTQ------VLY-GVLSTIPFLYILYVL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVY--------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663805 [Actinorhodopsin] SCGC_AAA044K16_Actinobacteria_HQ663805 gi|325163207|gb|HQ663805| Actinobacterium SCGC AAA044K16 rhodopsin gene, partial cds Actinobacterium SCGC AAA044K16 rhodopsin gene, partial cds HQ663805 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938529 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTTGATTGGCTACTAACAGTGCCTCTACTACTAGTAGAAGTTATTGCTGTACTAGCACTAGCTAAGGAAGTTTCACGCTCACTAATCATGCGTCTTGTACCAGCTTCTGCTGCAATGATCGCACTAGGTTACCCAGGTGAAGTTTCAAACGATCAGAACACACAGGTTCTATACGGTGTTCTATCAACAATTCCATTCCTTTACATCCTTTACGTCCTATTCGTAGAGCTTGGTAAGTCACTTGATCGTCAGCCTGAAGGAGTAGCGGCAACAGTTGGTCGCCTACGTCTTCTACTGATCGCAACATGGGGCGTCTACCCGATGGTCATA YVDWLLTVPLLLVEVIAVLALAKEVSRSLIMRLVPASAAMIALGYPGEVSNDQNTQVLYGVLSTIPFLYILYVLFVELGKSLDRQPEGVAATVGRLRLLLIATWGVYPMVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTTGATTGG------------------------CTACTAACAGTGCCTCTACTACTAGTAGAAGTTATTGCTGTACTAGCACTA---------GCT---AAGGAAGTTTCACGC---TCACTA------------------------------------ATCATGCGT---CTTGTACCAGCTTCTGCTGCAATGATCGCACTAGGTTACCCAGGTGAA---------GTT------------------------------------------------------------------------------TCA---AACGAT---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGTGTTCTATCAACAATTCCATTCCTTTACATCCTTTACGTCCTA---------------TTC------GTA---GAGCTTGGTAAGTCACTTGATCGTCAG---------------CCTGAAGGAGTA---GCG---GCA---ACA---GTT---GGT---CGCCTA---CGTCTTCTACTGATCGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCGATGGTCATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------IMR-LVPASAAMIALGYPGE---V--------------------------S-ND---Q---------NTQ------VLY-GVLSTIPFLYILYVL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYPMVI----------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663837 [Actinorhodopsin] SCGC_AAA280D15_Actinobacteria_HQ663837 gi|325163270|gb|HQ663837| Actinobacterium SCGC AAA280D15 rhodopsin gene, partial cds Actinobacterium SCGC AAA280D15 rhodopsin gene, partial cds HQ663837 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938595 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTGGATTGGCTACTAACAGTGCCTCTACTACTAGTAGAAGTTATTGCTGTACTAGCACTAGCTAAGGAAGTTTCACGCTCACTAATCATGCGTCTTGTACCAGCTTCTGCTGCAATGATCGCGCTTGGTTACCCAGGTGAAATTTCAAATGATCAGAACACTCAGGTTCTATACGGTGTTCTTTCAACAATTCCATTCCTTTACATCCTTTACGTCCTATTCGTAGAGCTTGGTAAGTCACTTGATCGTCAGCCTGAAGGAGTAGCGGCAACAGTTGGTCGCCTACGTCTTCTACTGATCGCAACATGGGGCGTCTACCCGATGGTC YVDWLLTVPLLLVEVIAVLALAKEVSRSLIMRLVPASAAMIALGYPGEISNDQNTQVLYGVLSTIPFLYILYVLFVELGKSLDRQPEGVAATVGRLRLLLIATWGVYPMV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTGGATTGG------------------------CTACTAACAGTGCCTCTACTACTAGTAGAAGTTATTGCTGTACTAGCACTA---------GCT---AAGGAAGTTTCACGC---TCACTA------------------------------------ATCATGCGT---CTTGTACCAGCTTCTGCTGCAATGATCGCGCTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---AATGAT---------CAG---------------------------AACACTCAG------------------GTTCTATAC---GGTGTTCTTTCAACAATTCCATTCCTTTACATCCTTTACGTCCTA---------------TTC------GTA---GAGCTTGGTAAGTCACTTGATCGTCAG---------------CCTGAAGGAGTA---GCG---GCA---ACA---GTT---GGT---CGCCTA---CGTCTTCTACTGATCGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCGATGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------IMR-LVPASAAMIALGYPGE---I--------------------------S-ND---Q---------NTQ------VLY-GVLSTIPFLYILYVL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYPMV------------------------------------------------------------------------------------------------ [Actinorhodopsin]_HQ663816 [Actinorhodopsin] SCGC_AAA278D19_Actinobacteria_HQ663816 gi|325163229|gb|HQ663816| Actinobacterium SCGC AAA278D19 rhodopsin gene, partial cds Actinobacterium SCGC AAA278D19 rhodopsin gene, partial cds HQ663816 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938548 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTAGATTGGCTTCTTACTGTTCCACTTCTACTCGTAGAAGTTATTGCAGTATTGGCACTTGCCAAGGAAGTTTCAAGCTCACTTATCTCACGTCTCGTTCCAGCTTCAGCTGCAATGATCGCTCTCGGGTATCCAGGTGAAATTTCATCAGATAAGAACACAGCAATCCTTTACGGTGTTCTCTCAACAATCCCATTCCTTTACATCCTTTATGTTCTCTTCGTAGAACTTGGAAAGTCATTGGATCGTCAGCCAGCTGGCGTAGGCGAGACAGTAGGACGCTTGCGTCTTCTTCTTATCGCTACATGGGGCGTCTACCCGATGGTCATA YVDWLLTVPLLLVEVIAVLALAKEVSSSLISRLVPASAAMIALGYPGEISSDKNTAILYGVLSTIPFLYILYVLFVELGKSLDRQPAGVGETVGRLRLLLIATWGVYPMVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTAGATTGG------------------------CTTCTTACTGTTCCACTTCTACTCGTAGAAGTTATTGCAGTATTGGCACTT---------GCC---AAGGAAGTTTCAAGC---TCACTT------------------------------------ATCTCACGT---CTCGTTCCAGCTTCAGCTGCAATGATCGCTCTCGGGTATCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---TCAGAT---------AAG---------------------------AACACAGCA------------------ATCCTTTAC---GGTGTTCTCTCAACAATCCCATTCCTTTACATCCTTTATGTTCTC---------------TTC------GTA---GAACTTGGAAAGTCATTGGATCGTCAG---------------CCAGCTGGCGTA---GGC---GAG---ACA---GTA---GGA---CGCTTG---CGTCTTCTTCTTATCGCT---------------------------------------------------------------ACATGG---------GGCGTCTACCCGATGGTCATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLLVEVIAVLAL---A-KEVSS-SL------------ISR-LVPASAAMIALGYPGE---I--------------------------S-SD---K---------NTA------ILY-GVLSTIPFLYILYVL-----F--V-ELGKSLDRQ-----PAGV-G-E-T-V-G-RL-RLLLIA---------------------TW---GVYPMVI----------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663830 [Actinorhodopsin] SCGC_AAA278O22_Actinobacteria_HQ663830 gi|325163256|gb|HQ663830| Actinobacterium SCGC AAA278O22 rhodopsin gene, partial cds Actinobacterium SCGC AAA278O22 rhodopsin gene, partial cds HQ663830 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:932044 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTTGATTGGCTTCTTACTGTTCCACTTCTACTCGTAGAAGTTATTGCAGTATTGGCACTTGCCAAGGAAGTTTCAAGCTCACTTATCTCACGTCTCGTTCCAGCTTCAGCTGCAATGATCGCTCTCGGGTATCCTGGTGAAATTTCATCAGATAAGAACACAGCAATCCTTTACGGTGTTCTCTCAACAATCCCATTCCTTTACATCCTTTATGTTCTCTTCGTAGAACTTGGAAAGTCATTGGATCGTCAGCCAGCTGGCGTAGGCGAGACAGTAGGACGCTTGCGTCTTCTTCTTATCGCTACATGGGGTGTGTATCCGATG YVDWLLTVPLLLVEVIAVLALAKEVSSSLISRLVPASAAMIALGYPGEISSDKNTAILYGVLSTIPFLYILYVLFVELGKSLDRQPAGVGETVGRLRLLLIATWGVYPM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTTGATTGG------------------------CTTCTTACTGTTCCACTTCTACTCGTAGAAGTTATTGCAGTATTGGCACTT---------GCC---AAGGAAGTTTCAAGC---TCACTT------------------------------------ATCTCACGT---CTCGTTCCAGCTTCAGCTGCAATGATCGCTCTCGGGTATCCTGGTGAA---------ATT------------------------------------------------------------------------------TCA---TCAGAT---------AAG---------------------------AACACAGCA------------------ATCCTTTAC---GGTGTTCTCTCAACAATCCCATTCCTTTACATCCTTTATGTTCTC---------------TTC------GTA---GAACTTGGAAAGTCATTGGATCGTCAG---------------CCAGCTGGCGTA---GGC---GAG---ACA---GTA---GGA---CGCTTG---CGTCTTCTTCTTATCGCT---------------------------------------------------------------ACATGG---------GGTGTGTATCCGATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLLVEVIAVLAL---A-KEVSS-SL------------ISR-LVPASAAMIALGYPGE---I--------------------------S-SD---K---------NTA------ILY-GVLSTIPFLYILYVL-----F--V-ELGKSLDRQ-----PAGV-G-E-T-V-G-RL-RLLLIA---------------------TW---GVYPM------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663836 [Actinorhodopsin] SCGC_AAA280D11_Actinobacteria_HQ663836 gi|325163268|gb|HQ663836| Actinobacterium SCGC AAA280D11 rhodopsin gene, partial cds Actinobacterium SCGC AAA280D11 rhodopsin gene, partial cds HQ663836 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938594 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) ACAGTGCCACTTCTACTCGTAGAAGTTATTGCAGTATTGGCACTTGCCAAGGAAGTTTCAAGCTCACTTATCTCACGCCTCGTTCCAGCTTCAGCTGCAATGATCGCTCTCGGATATCCTGGTGAAATTTCAACAGATAAGAACACAGCAATCCTTTACGGTGTTCTTTCAACAATCCCATTCCTTTACATCCTTTATGTTCTCTTCGTAGAACTAGGAAAGTCATTGGAACGTCAGCCAGCTGGCGTAGGCGAGACAGTAGGACGCTTGCGTCTTCTTCTTATCGCT TVPLLLVEVIAVLALAKEVSSSLISRLVPASAAMIALGYPGEISTDKNTAILYGVLSTIPFLYILYVLFVELGKSLERQPAGVGETVGRLRLLLIA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTGCCACTTCTACTCGTAGAAGTTATTGCAGTATTGGCACTT---------GCC---AAGGAAGTTTCAAGC---TCACTT------------------------------------ATCTCACGC---CTCGTTCCAGCTTCAGCTGCAATGATCGCTCTCGGATATCCTGGTGAA---------ATT------------------------------------------------------------------------------TCA---ACAGAT---------AAG---------------------------AACACAGCA------------------ATCCTTTAC---GGTGTTCTTTCAACAATCCCATTCCTTTACATCCTTTATGTTCTC---------------TTC------GTA---GAACTAGGAAAGTCATTGGAACGTCAG---------------CCAGCTGGCGTA---GGC---GAG---ACA---GTA---GGA---CGCTTG---CGTCTTCTTCTTATCGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPLLLVEVIAVLAL---A-KEVSS-SL------------ISR-LVPASAAMIALGYPGE---I--------------------------S-TD---K---------NTA------ILY-GVLSTIPFLYILYVL-----F--V-ELGKSLERQ-----PAGV-G-E-T-V-G-RL-RLLLIA-------------------------------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663795 [Actinorhodopsin] SCGC_AAA044C05_Actinobacteria_HQ663795 gi|325163188|gb|HQ663795| Actinobacterium SCGC AAA044C05 rhodopsin gene, partial cds Actinobacterium SCGC AAA044C05 rhodopsin gene, partial cds HQ663795 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938512 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTTGATTGGCTTCTCACAGTGCCACTTCTACTTGTAGAAGTTATTGCAGTATTGGCACTTGCTAAGGAAGTTTCACGTTCACTTATCACACGCCTTGTTCCAGCATCAGCTGCAATGATCGCTCTTGGATACCCTGGTGAAATTTCATCAGATAAGAACACAGCAATTCTTTACGGTGTTCTTTCAACAATCCCATTCCTTTACATTCTTTACGTACTATTCGTAGAGCTTGGAAAGTCACTTGATCGTCAGCCAGCTGGCGTCGGCGAGACAGTAGGACGTTTGCGTCTTCTTCTCATCGCAACATGGGGCGTCTACCCGATG YVDWLLTVPLLLVEVIAVLALAKEVSRSLITRLVPASAAMIALGYPGEISSDKNTAILYGVLSTIPFLYILYVLFVELGKSLDRQPAGVGETVGRLRLLLIATWGVYPM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTTGATTGG------------------------CTTCTCACAGTGCCACTTCTACTTGTAGAAGTTATTGCAGTATTGGCACTT---------GCT---AAGGAAGTTTCACGT---TCACTT------------------------------------ATCACACGC---CTTGTTCCAGCATCAGCTGCAATGATCGCTCTTGGATACCCTGGTGAA---------ATT------------------------------------------------------------------------------TCA---TCAGAT---------AAG---------------------------AACACAGCA------------------ATTCTTTAC---GGTGTTCTTTCAACAATCCCATTCCTTTACATTCTTTACGTACTA---------------TTC------GTA---GAGCTTGGAAAGTCACTTGATCGTCAG---------------CCAGCTGGCGTC---GGC---GAG---ACA---GTA---GGA---CGTTTG---CGTCTTCTTCTCATCGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCGATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-SD---K---------NTA------ILY-GVLSTIPFLYILYVL-----F--V-ELGKSLDRQ-----PAGV-G-E-T-V-G-RL-RLLLIA---------------------TW---GVYPM------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663804 [Actinorhodopsin] SCGC_AAA044F09_Actinobacteria_HQ663804 gi|325163205|gb|HQ663804| Actinobacterium SCGC AAA044F09 rhodopsin gene, partial cds Actinobacterium SCGC AAA044F09 rhodopsin gene, partial cds HQ663804 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938524 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTTGATTGGCTTCTTACAGTGCCACTTCTACTTGTAGAAGTTATCGCTGTATTGGCACTTGCTAAGGAAGTTTCAAAGTCACTTATCACACGTCTAGTTCCAGCATCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAAATTTCATCAGATAAGAACACAGCAATCCTTTACGGTGTTCTTTCAACAATCCCATTCCTTTACATCCTCTACGTACTATTCGTAGAGCTTGGCAAGTCATTGGATCGCCAGCCAGCTGGTGTCGGTGAGACAGTAGGACGTCTACGTCTTCTTCTCATTGCTACATGGGGTGTGTATCCGATGGTC YVDWLLTVPLLLVEVIAVLALAKEVSKSLITRLVPASAAMIALGYPGEISSDKNTAILYGVLSTIPFLYILYVLFVELGKSLDRQPAGVGETVGRLRLLLIATWGVYPMV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTTGATTGG------------------------CTTCTTACAGTGCCACTTCTACTTGTAGAAGTTATCGCTGTATTGGCACTT---------GCT---AAGGAAGTTTCAAAG---TCACTT------------------------------------ATCACACGT---CTAGTTCCAGCATCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---TCAGAT---------AAG---------------------------AACACAGCA------------------ATCCTTTAC---GGTGTTCTTTCAACAATCCCATTCCTTTACATCCTCTACGTACTA---------------TTC------GTA---GAGCTTGGCAAGTCATTGGATCGCCAG---------------CCAGCTGGTGTC---GGT---GAG---ACA---GTA---GGA---CGTCTA---CGTCTTCTTCTCATTGCT---------------------------------------------------------------ACATGG---------GGTGTGTATCCGATGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLLVEVIAVLAL---A-KEVSK-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-SD---K---------NTA------ILY-GVLSTIPFLYILYVL-----F--V-ELGKSLDRQ-----PAGV-G-E-T-V-G-RL-RLLLIA---------------------TW---GVYPMV------------------------------------------------------------------------------------------------ [Actinorhodopsin]_KC601704 [Actinorhodopsin] clone_19-4_KC601704 gi|523706402|gb|KC601704| Uncultured bacterium clone 19-4 actinorhodopsin gene, partial cds. Uncultured bacterium clone 19-4 actinorhodopsin gene, partial cds. KC601704 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 humic freshwater reservoir other freshwater 48.6158 14.6762 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 AGGTATGTGGACTGGCTTCTTACTGTTCCACTTCTACTCGTTGAAGTTATCGCAGTTTTGGCACTTGCTAAGGAAGTTTCACGTTCACTTATCACACGCCTCGTTCCAGCAGCAGCTGCGATGATCGCACTTGGTTACCCAGGTCAGATTTCAACTGTGAAGAACACACAGGTTCTTTACGGTGTTCTTTCAACAATCCCATTCCTTTACATCCTTTACGTACTCTTCGTGGAGCTTGGAAAGTCACCTGATCGTCAGCCAGCTGGCGTAGGCGAGACAATCGGACGCTTGCGTCTGCTTCTCGTTGCTACATGGGGCGTTTATCCCAT RYVDWLLTVPLLLVEVIAVLALAKEVSRSLITRLVPAAAAMIALGYPGQISTVKNTQVLYGVLSTIPFLYILYVLFVELGKSPDRQPAGVGETIGRLRLLLVATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTATGTGGACTGG------------------------CTTCTTACTGTTCCACTTCTACTCGTTGAAGTTATCGCAGTTTTGGCACTT---------GCT---AAGGAAGTTTCACGT---TCACTT------------------------------------ATCACACGC---CTCGTTCCAGCAGCAGCTGCGATGATCGCACTTGGTTACCCAGGTCAG---------ATT------------------------------------------------------------------------------TCA---ACTGTG---------AAG---------------------------AACACACAG------------------GTTCTTTAC---GGTGTTCTTTCAACAATCCCATTCCTTTACATCCTTTACGTACTC---------------TTC------GTG---GAGCTTGGAAAGTCACCTGATCGTCAG---------------CCAGCTGGCGTA---GGC---GAG---ACA---ATC---GGA---CGCTTG---CGTCTGCTTCTCGTTGCT---------------------------------------------------------------ACATGG---------GGCGTTTATCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------ITR-LVPAAAAMIALGYPGQ---I--------------------------S-TV---K---------NTQ------VLY-GVLSTIPFLYILYVL-----F--V-ELGKSPDRQ-----PAGV-G-E-T-I-G-RL-RLLLVA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601713 [Actinorhodopsin] clone_20-4_KC601713 gi|523706420|gb|KC601713| Uncultured bacterium clone 20-4 actinorhodopsin gene, partial cds. Uncultured bacterium clone 20-4 actinorhodopsin gene, partial cds. KC601713 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 humic freshwater reservoir other freshwater 48.6158 14.6762 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 AGGTACGTGGACTGGCTTCTTACTGTTCCACTTCTACTCGTTGAAGTTATCGCAGTTTTGGCACTTGCTAAGGAAGTTTCACGTTCACTTATCACACGCCTCGTTCCAGCAGCAGCTGCGATGATCGCACCTGGTTACCCAGGTCAGATTTCAACTGTGAAGAACACACAGGTTCTTTACGGTGTTCTTTCAACAATCCCATTCCTTTACATCCTTTACGTACTCTTCGTGGAGCTTGGAAAGTCACTTGATCGTCAGCCAGCTGGCGTAGGCGAGACAATCGGACGCTTGCGTCTGCTTCTCGTTGCTACATGGGGCGTCTACCCCAT RYVDWLLTVPLLLVEVIAVLALAKEVSRSLITRLVPAAAAMIAPGYPGQISTVKNTQVLYGVLSTIPFLYILYVLFVELGKSLDRQPAGVGETIGRLRLLLVATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACGTGGACTGG------------------------CTTCTTACTGTTCCACTTCTACTCGTTGAAGTTATCGCAGTTTTGGCACTT---------GCT---AAGGAAGTTTCACGT---TCACTT------------------------------------ATCACACGC---CTCGTTCCAGCAGCAGCTGCGATGATCGCACCTGGTTACCCAGGTCAG---------ATT------------------------------------------------------------------------------TCA---ACTGTG---------AAG---------------------------AACACACAG------------------GTTCTTTAC---GGTGTTCTTTCAACAATCCCATTCCTTTACATCCTTTACGTACTC---------------TTC------GTG---GAGCTTGGAAAGTCACTTGATCGTCAG---------------CCAGCTGGCGTA---GGC---GAG---ACA---ATC---GGA---CGCTTG---CGTCTGCTTCTCGTTGCT---------------------------------------------------------------ACATGG---------GGCGTCTACCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------ITR-LVPAAAAMIAPGYPGQ---I--------------------------S-TV---K---------NTQ------VLY-GVLSTIPFLYILYVL-----F--V-ELGKSLDRQ-----PAGV-G-E-T-I-G-RL-RLLLVA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601715 [Actinorhodopsin] clone_20-6_KC601715 gi|523706424|gb|KC601715| Uncultured bacterium clone 20-6 actinorhodopsin gene, partial cds. Uncultured bacterium clone 20-6 actinorhodopsin gene, partial cds. KC601715 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 humic freshwater reservoir other freshwater 48.6158 14.6762 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGGTATGTGGATTGGCTTCTTACTGTTCCACTTCTACTCGTTGAAGTTATCGCAGTTTTGGCACTTGCTAAGGAAGTTTCACGTTCACTTATCACACGCCTCGTTCCAGCAGCAGCTGCGATGATCGCACTTGGTTACCCAGGTCAGATTTCAACTGTGAAGAACACACAGGTTCTTTACGGTGTTCTTTCAACAATCCCATTCCTTTACATCCTTTACGTACTCTTCGTGGAGCTTGGAAAGTCACTTGATCGTCAGCCAGCTGGCGTAGGCGAGACAATCGGACGCTTGCGTCTGCTTCTCGTTGCTACATGGGGCGTCTACCCCAT RYVDWLLTVPLLLVEVIAVLALAKEVSRSLITRLVPAAAAMIALGYPGQISTVKNTQVLYGVLSTIPFLYILYVLFVELGKSLDRQPAGVGETIGRLRLLLVATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTATGTGGATTGG------------------------CTTCTTACTGTTCCACTTCTACTCGTTGAAGTTATCGCAGTTTTGGCACTT---------GCT---AAGGAAGTTTCACGT---TCACTT------------------------------------ATCACACGC---CTCGTTCCAGCAGCAGCTGCGATGATCGCACTTGGTTACCCAGGTCAG---------ATT------------------------------------------------------------------------------TCA---ACTGTG---------AAG---------------------------AACACACAG------------------GTTCTTTAC---GGTGTTCTTTCAACAATCCCATTCCTTTACATCCTTTACGTACTC---------------TTC------GTG---GAGCTTGGAAAGTCACTTGATCGTCAG---------------CCAGCTGGCGTA---GGC---GAG---ACA---ATC---GGA---CGCTTG---CGTCTGCTTCTCGTTGCT---------------------------------------------------------------ACATGG---------GGCGTCTACCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------ITR-LVPAAAAMIALGYPGQ---I--------------------------S-TV---K---------NTQ------VLY-GVLSTIPFLYILYVL-----F--V-ELGKSLDRQ-----PAGV-G-E-T-I-G-RL-RLLLVA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663808 [Actinorhodopsin] SCGC_AAA044M13_Actinobacteria_HQ663808 gi|325163213|gb|HQ663808| Actinobacterium SCGC AAA044M13 rhodopsin gene, partial cds Actinobacterium SCGC AAA044M13 rhodopsin gene, partial cds HQ663808 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938533 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) GATTGGCTTCTTACTGTTCCACTTCTACTCGTAGAAGTTATTGCAGTACTTGCACTTGCTAAGGAAGTTTCACGTTCACTTATCACACGCCTTGTTCCAGCATCAGCTGCAATGATCGCGCTTGGTTACCCAGGTGAAATTTCTTCAGATAAGAACACAGCAATCCTTTACGGTGTTCTTTCAACAATCCCATTCATTTACATCCTCTACGTACTATTCGTAGAGCTTGGAAAGTCATTGGAGCGTCAGCCAGCAGGCGTAGCAGAGACAATCGGACGCTTGCGTCTTCTTCTCATCGCTACATGGGGCGTCTATCCGATGGTCATA DWLLTVPLLLVEVIAVLALAKEVSRSLITRLVPASAAMIALGYPGEISSDKNTAILYGVLSTIPFIYILYVLFVELGKSLERQPAGVAETIGRLRLLLIATWGVYPMVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTGG------------------------CTTCTTACTGTTCCACTTCTACTCGTAGAAGTTATTGCAGTACTTGCACTT---------GCT---AAGGAAGTTTCACGT---TCACTT------------------------------------ATCACACGC---CTTGTTCCAGCATCAGCTGCAATGATCGCGCTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCT---TCAGAT---------AAG---------------------------AACACAGCA------------------ATCCTTTAC---GGTGTTCTTTCAACAATCCCATTCATTTACATCCTCTACGTACTA---------------TTC------GTA---GAGCTTGGAAAGTCATTGGAGCGTCAG---------------CCAGCAGGCGTA---GCA---GAG---ACA---ATC---GGA---CGCTTG---CGTCTTCTTCTCATCGCT---------------------------------------------------------------ACATGG---------GGCGTCTATCCGATGGTCATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-SD---K---------NTA------ILY-GVLSTIPFIYILYVL-----F--V-ELGKSLERQ-----PAGV-A-E-T-I-G-RL-RLLLIA---------------------TW---GVYPMVI----------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601720 [Actinorhodopsin] clone_22-2_KC601720 gi|523706434|gb|KC601720| Uncultured bacterium clone 22-2 actinorhodopsin gene, partial cds. Uncultured bacterium clone 22-2 actinorhodopsin gene, partial cds. KC601720 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 oligo-mesotrophic deep submontane freshwater lake other freshwater 47.82 13.38 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGGTACGTGGACTGGCTTCTTACTGTTCCACTTCTACTCGTAGAAGTTATTGCAGTACTTGCACTTGCTAAAGAAGTTTCAAAGTCACTTATCATGCGTCTCGTTCCAGCATCAGCTGCAATGATCGCTCTTGGTTACCCAGGTGAAATTACATCTGACAAGAACACAGCAATCCTTTACGGTGTTCTTTCAACAATCCCATTCCTTTACATCCTCTACGTACTATTCGTAGAGCTTGGAAAGTCATTGGAGCGCCAGCCAGCTGGTGTAGCAGAGACAATCGGACGCTTGCGTCTTCTTCTCATTGCTACATGGGGAGTCTACCCTAT RYVDWLLTVPLLLVEVIAVLALAKEVSKSLIMRLVPASAAMIALGYPGEITSDKNTAILYGVLSTIPFLYILYVLFVELGKSLERQPAGVAETIGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTACGTGGACTGG------------------------CTTCTTACTGTTCCACTTCTACTCGTAGAAGTTATTGCAGTACTTGCACTT---------GCT---AAAGAAGTTTCAAAG---TCACTT------------------------------------ATCATGCGT---CTCGTTCCAGCATCAGCTGCAATGATCGCTCTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------ACA---TCTGAC---------AAG---------------------------AACACAGCA------------------ATCCTTTAC---GGTGTTCTTTCAACAATCCCATTCCTTTACATCCTCTACGTACTA---------------TTC------GTA---GAGCTTGGAAAGTCATTGGAGCGCCAG---------------CCAGCTGGTGTA---GCA---GAG---ACA---ATC---GGA---CGCTTG---CGTCTTCTTCTCATTGCT---------------------------------------------------------------ACATGG---------GGAGTCTACCCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLLLVEVIAVLAL---A-KEVSK-SL------------IMR-LVPASAAMIALGYPGE---I--------------------------T-SD---K---------NTA------ILY-GVLSTIPFLYILYVL-----F--V-ELGKSLERQ-----PAGV-A-E-T-I-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601727 [Actinorhodopsin] clone_25-6_KC601727 gi|523706448|gb|KC601727| Uncultured bacterium clone 25-6 actinorhodopsin gene, partial cds. Uncultured bacterium clone 25-6 actinorhodopsin gene, partial cds. KC601727 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 oligo-mesotrophic deep submontane freshwater lake other freshwater 47.82 13.38 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGGTACGTTGACTGGCTTCTTACTGTTCCACTTCTACTCGTAGAAGTTATTGCAGTACTTGCACTTGCTAAGGAAGTTTCAAAGTCACTTATCATGCGTCTCGTTCCAGCATCAGCTGCAATGATCGCTCTTGGTTACCCAGGTGAAATTACATCTGACAAGAACACAGCAATCCTTTACGGTGTTCTTTCAACAATCCCATTCCTTTGCATCCTCTACGTACTATTCGTAGAGCTTGGAAAGTCATTGGAGCGCCAGCCAGCTGGTGTAGCAGAGACAATCGGACGCTTGCGTCTTCTTCTCATTGCTACATGGGGCGTCTACCCTAT RYVDWLLTVPLLLVEVIAVLALAKEVSKSLIMRLVPASAAMIALGYPGEITSDKNTAILYGVLSTIPFLCILYVLFVELGKSLERQPAGVAETIGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTACGTTGACTGG------------------------CTTCTTACTGTTCCACTTCTACTCGTAGAAGTTATTGCAGTACTTGCACTT---------GCT---AAGGAAGTTTCAAAG---TCACTT------------------------------------ATCATGCGT---CTCGTTCCAGCATCAGCTGCAATGATCGCTCTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------ACA---TCTGAC---------AAG---------------------------AACACAGCA------------------ATCCTTTAC---GGTGTTCTTTCAACAATCCCATTCCTTTGCATCCTCTACGTACTA---------------TTC------GTA---GAGCTTGGAAAGTCATTGGAGCGCCAG---------------CCAGCTGGTGTA---GCA---GAG---ACA---ATC---GGA---CGCTTG---CGTCTTCTTCTCATTGCT---------------------------------------------------------------ACATGG---------GGCGTCTACCCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLLLVEVIAVLAL---A-KEVSK-SL------------IMR-LVPASAAMIALGYPGE---I--------------------------T-SD---K---------NTA------ILY-GVLSTIPFLCILYVL-----F--V-ELGKSLERQ-----PAGV-A-E-T-I-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HE646808 [Actinorhodopsin] clone_IofNWEx5_HE646808 gi|363805782|gb|HE646808| Uncultured bacterium partial actR gene for Actinorhodopsin, clone IofNWEx5. Uncultured bacterium partial actR gene for Actinorhodopsin, clone IofNWEx5. HE646808 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 19-nov-12 2010 Lake Stechlin surface water other freshwater 53.17 13.03 Environmental actinorhodopsin expression revealed by a new in situ filtration and fixation sampler Wurzbacher,C., Salka,I. and Grossart,H.P. Environ Microbiol Rep 4 (5), 491-497 (2012) 23760893 acI-like TATCGTTATGTTGATTGGCTACTAACTGTTCCACTACTTCTCGTTGAGGTAATTGCAGTACTTGCACTTGCTAAGGAAGTTTCAAAGTCACTCATCATGCGTCTCGTTCCAGCATCAGCTGCAATGATCGCTCTTGGTTACCCAGGTGAAATTACATCTGACAAGAACACAGCAATCCTTTACGGTGTTCTTTCAACAATCCCATTCCTTTACATCCTCTACGTACTATTCGTAGAGCTTGGAAAGTCATTGGAGCGCCAGCCAGCTGGTGTAGCTGAGACAATCGGACGCTTGCGTCTTCTTCTCATTGCTACATGGGGCGTTTACCCAATA YRYVDWLLTVPLLLVEVIAVLALAKEVSKSLIMRLVPASAAMIALGYPGEITSDKNTAILYGVLSTIPFLYILYVLFVELGKSLERQPAGVAETIGRLRLLLIATWGVYPI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCGTTATGTTGATTGG------------------------CTACTAACTGTTCCACTACTTCTCGTTGAGGTAATTGCAGTACTTGCACTT---------GCT---AAGGAAGTTTCAAAG---TCACTC------------------------------------ATCATGCGT---CTCGTTCCAGCATCAGCTGCAATGATCGCTCTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------ACA---TCTGAC---------AAG---------------------------AACACAGCA------------------ATCCTTTAC---GGTGTTCTTTCAACAATCCCATTCCTTTACATCCTCTACGTACTA---------------TTC------GTA---GAGCTTGGAAAGTCATTGGAGCGCCAG---------------CCAGCTGGTGTA---GCT---GAG---ACA---ATC---GGA---CGCTTG---CGTCTTCTTCTCATTGCT---------------------------------------------------------------ACATGG---------GGCGTTTACCCAATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYVDW--------LLTVPLLLVEVIAVLAL---A-KEVSK-SL------------IMR-LVPASAAMIALGYPGE---I--------------------------T-SD---K---------NTA------ILY-GVLSTIPFLYILYVL-----F--V-ELGKSLERQ-----PAGV-A-E-T-I-G-RL-RLLLIA---------------------TW---GVYPI------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HE646821 [Actinorhodopsin] clone_QitNWEx6_HE646821 gi|363805808|gb|HE646821| Uncultured bacterium partial actR gene for Actinorhodopsin, clone QitNWEx6. Uncultured bacterium partial actR gene for Actinorhodopsin, clone QitNWEx6. HE646821 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 19-nov-12 2010 Lake Stechlin surface water other freshwater 53.17 13.03 Environmental actinorhodopsin expression revealed by a new in situ filtration and fixation sampler Wurzbacher,C., Salka,I. and Grossart,H.P. Environ Microbiol Rep 4 (5), 491-497 (2012) 23760893 acI-like TATCGTTATGCGGACTGGCTACTAACTGTTCCACTACTTCTCGTTGAGGTAATTGCAGTACTTGCACTTGCTAAGGAAGTTTCAAAGTCACTCATCATGCGTCTCGTTCCAGCATCAGCTGCAATGATCGCTCTTGGTTACCCAGGTGAAATTACATCTGACAAGAACACAGCAATCCTTTACGGTGTTCTTTCAACAATCCCATTCCTTTACATCCTCTACGTACTATTCGTAGAGCTTGGAAAGTCATTGGAGCGCCAGCCAGCTGGTGTAGCAGAGACAATCGGACGCTTGCGTCTTCTTCTCATTGCTACATGGGGCGTATACCCAATA YRYADWLLTVPLLLVEVIAVLALAKEVSKSLIMRLVPASAAMIALGYPGEITSDKNTAILYGVLSTIPFLYILYVLFVELGKSLERQPAGVAETIGRLRLLLIATWGVYPI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCGTTATGCGGACTGG------------------------CTACTAACTGTTCCACTACTTCTCGTTGAGGTAATTGCAGTACTTGCACTT---------GCT---AAGGAAGTTTCAAAG---TCACTC------------------------------------ATCATGCGT---CTCGTTCCAGCATCAGCTGCAATGATCGCTCTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------ACA---TCTGAC---------AAG---------------------------AACACAGCA------------------ATCCTTTAC---GGTGTTCTTTCAACAATCCCATTCCTTTACATCCTCTACGTACTA---------------TTC------GTA---GAGCTTGGAAAGTCATTGGAGCGCCAG---------------CCAGCTGGTGTA---GCA---GAG---ACA---ATC---GGA---CGCTTG---CGTCTTCTTCTCATTGCT---------------------------------------------------------------ACATGG---------GGCGTATACCCAATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYADW--------LLTVPLLLVEVIAVLAL---A-KEVSK-SL------------IMR-LVPASAAMIALGYPGE---I--------------------------T-SD---K---------NTA------ILY-GVLSTIPFLYILYVL-----F--V-ELGKSLERQ-----PAGV-A-E-T-I-G-RL-RLLLIA---------------------TW---GVYPI------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601723 [Actinorhodopsin] clone_22-7_KC601723 gi|523706440|gb|KC601723| Uncultured bacterium clone 22-7 actinorhodopsin gene, partial cds. Uncultured bacterium clone 22-7 actinorhodopsin gene, partial cds. KC601723 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 oligo-mesotrophic deep submontane freshwater lake other freshwater 47.82 13.38 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 AGATATGTGGACTGGCTTCTTACTGTTCCACTTCTACTCGTAGAAGTTATTGCAGTACTTGCACTTGCTAAAGAAGTTTCAAAGTCACTTATCATGCGTCTCGTTCCAGCATCAGCTGCAATGATCGCTCTTGGTTACCCAGGTGAAATTACATCTGACAAGAACACAGCAATCCTTTACGGTGTTCTTTCAACAATCCCATTCCTTTACATCCTCTACGTACTATTCGTAGAGCTTGGAAAGTCATTGGAGCGCCAGCCAGCTGGTGTAGCAGAGACAATCGGACGCTTGCGTCTTCTTCTCATTGCTACATGGGGCGTCTACCCCAT RYVDWLLTVPLLLVEVIAVLALAKEVSKSLIMRLVPASAAMIALGYPGEITSDKNTAILYGVLSTIPFLYILYVLFVELGKSLERQPAGVAETIGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATGTGGACTGG------------------------CTTCTTACTGTTCCACTTCTACTCGTAGAAGTTATTGCAGTACTTGCACTT---------GCT---AAAGAAGTTTCAAAG---TCACTT------------------------------------ATCATGCGT---CTCGTTCCAGCATCAGCTGCAATGATCGCTCTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------ACA---TCTGAC---------AAG---------------------------AACACAGCA------------------ATCCTTTAC---GGTGTTCTTTCAACAATCCCATTCCTTTACATCCTCTACGTACTA---------------TTC------GTA---GAGCTTGGAAAGTCATTGGAGCGCCAG---------------CCAGCTGGTGTA---GCA---GAG---ACA---ATC---GGA---CGCTTG---CGTCTTCTTCTCATTGCT---------------------------------------------------------------ACATGG---------GGCGTCTACCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLLLVEVIAVLAL---A-KEVSK-SL------------IMR-LVPASAAMIALGYPGE---I--------------------------T-SD---K---------NTA------ILY-GVLSTIPFLYILYVL-----F--V-ELGKSLERQ-----PAGV-A-E-T-I-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601736 [Actinorhodopsin] clone_27-1_KC601736 gi|523706466|gb|KC601736| Uncultured bacterium clone 27-1 actinorhodopsin gene, partial cds. Uncultured bacterium clone 27-1 actinorhodopsin gene, partial cds. KC601736 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 oligo-mesotrophic deep submontane freshwater lake other freshwater 47.82 13.38 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGGTATGTGGACTGGCTTCTTACTGTTCCACTTCTACTCGTAGAAGTTATTGCAGTACTTGCACTTGCTAAAGAAGTTTCAAAGTCACTTATCATGCGTCTCGTTCCAGCATCAGCTGCAATGATCGCTCTTGGTTACCCAGGTGAAATTACATCTGACAAGAACACAGCAATCCTTTACGGTGTTCTTTCAACAATCCCATTCCTTTACATCCTCTACGTACTATTCGTAGAGCTTGGAAAGTCATTGGAGCGCCAGCCAGCTGGTGTAGCAGAGACAATCGGACGCTTGCGTCTTCTTCTCATTGCTACATGGGGCGTCTACCCAAT RYVDWLLTVPLLLVEVIAVLALAKEVSKSLIMRLVPASAAMIALGYPGEITSDKNTAILYGVLSTIPFLYILYVLFVELGKSLERQPAGVAETIGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTATGTGGACTGG------------------------CTTCTTACTGTTCCACTTCTACTCGTAGAAGTTATTGCAGTACTTGCACTT---------GCT---AAAGAAGTTTCAAAG---TCACTT------------------------------------ATCATGCGT---CTCGTTCCAGCATCAGCTGCAATGATCGCTCTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------ACA---TCTGAC---------AAG---------------------------AACACAGCA------------------ATCCTTTAC---GGTGTTCTTTCAACAATCCCATTCCTTTACATCCTCTACGTACTA---------------TTC------GTA---GAGCTTGGAAAGTCATTGGAGCGCCAG---------------CCAGCTGGTGTA---GCA---GAG---ACA---ATC---GGA---CGCTTG---CGTCTTCTTCTCATTGCT---------------------------------------------------------------ACATGG---------GGCGTCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLLLVEVIAVLAL---A-KEVSK-SL------------IMR-LVPASAAMIALGYPGE---I--------------------------T-SD---K---------NTA------ILY-GVLSTIPFLYILYVL-----F--V-ELGKSLERQ-----PAGV-A-E-T-I-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601695 [Actinorhodopsin] clone_17-5_KC601695 gi|523706384|gb|KC601695| Uncultured bacterium clone 17-5 actinorhodopsin gene, partial cds. Uncultured bacterium clone 17-5 actinorhodopsin gene, partial cds. KC601695 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 humic freshwater reservoir other freshwater 48.6158 14.6762 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGGTACGTGGACTGGCTACTTACTGTGCCACTACTTCTTGTTGAAGTTGTTGCAGTACTTGCACTTGCAAAGGAACTTTCAAAGTCACTCATGATGCGTCTTGTCCCAGCATCAGCAGCGATGATCGCACTTGGTTACCCAGGTGAAATTTCATCAGATAAGAACACAGCAATCCTTTACGGTGTGCTTTCAACAATTCCATTCCTTTACATCCTCTACGTACTATTCGTAGAACTTGGAAAGTCATTGGATCGTCAGCCAGCTGGTGTTGCAGAGACTGTAGGACGCTTGCGTCTTCTTCTTATCGCAACATGGGGCGTTTACCCGAT RYVDWLLTVPLLLVEVVAVLALAKELSKSLMMRLVPASAAMIALGYPGEISSDKNTAILYGVLSTIPFLYILYVLFVELGKSLDRQPAGVAETVGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTACGTGGACTGG------------------------CTACTTACTGTGCCACTACTTCTTGTTGAAGTTGTTGCAGTACTTGCACTT---------GCA---AAGGAACTTTCAAAG---TCACTC------------------------------------ATGATGCGT---CTTGTCCCAGCATCAGCAGCGATGATCGCACTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---TCAGAT---------AAG---------------------------AACACAGCA------------------ATCCTTTAC---GGTGTGCTTTCAACAATTCCATTCCTTTACATCCTCTACGTACTA---------------TTC------GTA---GAACTTGGAAAGTCATTGGATCGTCAG---------------CCAGCTGGTGTT---GCA---GAG---ACT---GTA---GGA---CGCTTG---CGTCTTCTTCTTATCGCA---------------------------------------------------------------ACATGG---------GGCGTTTACCCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLLLVEVVAVLAL---A-KELSK-SL------------MMR-LVPASAAMIALGYPGE---I--------------------------S-SD---K---------NTA------ILY-GVLSTIPFLYILYVL-----F--V-ELGKSLDRQ-----PAGV-A-E-T-V-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663779 [Actinorhodopsin] SCGC_AAA041O11_Actinobacteria_HQ663779 gi|325163157|gb|HQ663779| Actinobacterium SCGC AAA041O11 rhodopsin gene, partial cds Actinobacterium SCGC AAA041O11 rhodopsin gene, partial cds HQ663779 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938484 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTGGATTGGCTTCTAACTGTTCCACTTCTACTCGTAGAAGTTATTGCAGTACTAGCACTTGCTAAGGAAGTTTCACGCTCCCTAATCATGCGTCTTGTACCAGCATCAGCAGCGATGATTGCACTTGGATACCCAGGTGAAGTTTCATCAGATAAGAACACAGCAATCCTTTACGGTGTTCTTTCAACAATTCCATTCCTCTATATTCTTTATGTACTCTTTGTTGAACTTGGAAAGTCACTAGAGCGTCAACCAGAAGGTGTAGCAGCGACAGTTGGTCGTCTACGTCTTCTATTGATCGCTACATGGGGCGTCTACCCGATGGTCATA YVDWLLTVPLLLVEVIAVLALAKEVSRSLIMRLVPASAAMIALGYPGEVSSDKNTAILYGVLSTIPFLYILYVLFVELGKSLERQPEGVAATVGRLRLLLIATWGVYPMVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTGGATTGG------------------------CTTCTAACTGTTCCACTTCTACTCGTAGAAGTTATTGCAGTACTAGCACTT---------GCT---AAGGAAGTTTCACGC---TCCCTA------------------------------------ATCATGCGT---CTTGTACCAGCATCAGCAGCGATGATTGCACTTGGATACCCAGGTGAA---------GTT------------------------------------------------------------------------------TCA---TCAGAT---------AAG---------------------------AACACAGCA------------------ATCCTTTAC---GGTGTTCTTTCAACAATTCCATTCCTCTATATTCTTTATGTACTC---------------TTT------GTT---GAACTTGGAAAGTCACTAGAGCGTCAA---------------CCAGAAGGTGTA---GCA---GCG---ACA---GTT---GGT---CGTCTA---CGTCTTCTATTGATCGCT---------------------------------------------------------------ACATGG---------GGCGTCTACCCGATGGTCATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------IMR-LVPASAAMIALGYPGE---V--------------------------S-SD---K---------NTA------ILY-GVLSTIPFLYILYVL-----F--V-ELGKSLERQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYPMVI----------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663789 [Actinorhodopsin] SCGC_AAA043L10_Gammaproteobacteria_HQ663789 gi|325163177|gb|HQ663789| Gamma proteobacterium SCGC AAA043L10 rhodopsin gene, partial cds Gamma proteobacterium SCGC AAA043L10 rhodopsin gene, partial cds HQ663789 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Gammaproteobacteria] taxon:939028 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTGGATTGGCTTCTAACTGTTCCACTTCTACTCGTAGAAGTTATTGCAGTACTAGCACTTGCTAAGGAAGTTTCACGCTCCCTAATCATGCGTCTTGTACCAGCATCAGCAGCGATGATTGCACTTGGATACCCAGGTGAAGTTTCATCAGATAAGAACACAGCAATCCTTTACGGTGTTCTTTCAACAATTCCATTCCTCTATATTCTTTATGTACTCTTTGTTGAACTTGGAAAGTCACTAGAGCGTCAACCAGAAGGTGTAGCAGCGACAGTTGGTCGTCTACGTCTTCTATTGATCGCTACATGGGGCGTCTATCCGATGGTCAAG YVDWLLTVPLLLVEVIAVLALAKEVSRSLIMRLVPASAAMIALGYPGEVSSDKNTAILYGVLSTIPFLYILYVLFVELGKSLERQPEGVAATVGRLRLLLIATWGVYPMVK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTGGATTGG------------------------CTTCTAACTGTTCCACTTCTACTCGTAGAAGTTATTGCAGTACTAGCACTT---------GCT---AAGGAAGTTTCACGC---TCCCTA------------------------------------ATCATGCGT---CTTGTACCAGCATCAGCAGCGATGATTGCACTTGGATACCCAGGTGAA---------GTT------------------------------------------------------------------------------TCA---TCAGAT---------AAG---------------------------AACACAGCA------------------ATCCTTTAC---GGTGTTCTTTCAACAATTCCATTCCTCTATATTCTTTATGTACTC---------------TTT------GTT---GAACTTGGAAAGTCACTAGAGCGTCAA---------------CCAGAAGGTGTA---GCA---GCG---ACA---GTT---GGT---CGTCTA---CGTCTTCTATTGATCGCT---------------------------------------------------------------ACATGG---------GGCGTCTATCCGATGGTCAAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------IMR-LVPASAAMIALGYPGE---V--------------------------S-SD---K---------NTA------ILY-GVLSTIPFLYILYVL-----F--V-ELGKSLERQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYPMVK----------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663799 [Actinorhodopsin] SCGC_AAA044D05_Actinobacteria_HQ663799 gi|325163196|gb|HQ663799| Actinobacterium SCGC AAA044D05 rhodopsin gene, partial cds Actinobacterium SCGC AAA044D05 rhodopsin gene, partial cds HQ663799 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938517 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTTGATTGGCTTCTAACTGTTCCACTTCTACTCGTAGAAGTTATTGCAGTACTAGCACTTGCTAAGGAAGTTTCACGCTCCCTAATCATGCGTCTTGTACCAGCATCAGCAGCGATGATTGCACTTGGATACCCAGGTGAAGTTTCATCAGATAAGAACACAGCAATCCTTTACGGTGTTCTTTCAACAATTCCATTCCTCTATATTCTTTATGTACTCTTTGTTGAACTTGGAAAGTCACTAGAGCGTCAACCAGAAGGTGTAGCAGCGACAGTTGGTCGTCTACGTCTTCTATTGATCGCTACATGGGGCGTCTACCCGATGGTCATA YVDWLLTVPLLLVEVIAVLALAKEVSRSLIMRLVPASAAMIALGYPGEVSSDKNTAILYGVLSTIPFLYILYVLFVELGKSLERQPEGVAATVGRLRLLLIATWGVYPMVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTTGATTGG------------------------CTTCTAACTGTTCCACTTCTACTCGTAGAAGTTATTGCAGTACTAGCACTT---------GCT---AAGGAAGTTTCACGC---TCCCTA------------------------------------ATCATGCGT---CTTGTACCAGCATCAGCAGCGATGATTGCACTTGGATACCCAGGTGAA---------GTT------------------------------------------------------------------------------TCA---TCAGAT---------AAG---------------------------AACACAGCA------------------ATCCTTTAC---GGTGTTCTTTCAACAATTCCATTCCTCTATATTCTTTATGTACTC---------------TTT------GTT---GAACTTGGAAAGTCACTAGAGCGTCAA---------------CCAGAAGGTGTA---GCA---GCG---ACA---GTT---GGT---CGTCTA---CGTCTTCTATTGATCGCT---------------------------------------------------------------ACATGG---------GGCGTCTACCCGATGGTCATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------IMR-LVPASAAMIALGYPGE---V--------------------------S-SD---K---------NTA------ILY-GVLSTIPFLYILYVL-----F--V-ELGKSLERQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYPMVI----------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601699 [Actinorhodopsin] clone_18-1_KC601699 gi|523706392|gb|KC601699| Uncultured bacterium clone 18-1 actinorhodopsin gene, partial cds. Uncultured bacterium clone 18-1 actinorhodopsin gene, partial cds. KC601699 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 humic freshwater reservoir other freshwater 48.6158 14.6762 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGATACGTGGATTGGCTTCTCACAGTCCCACTTCTCCTTGTTGAAGTTGTCGCAGTATTAGCACTTGCTAAGGAAGTTTCACGTTCACTCATCATGCGCCTCGTTCCAGCTTCAGCTGCAATGATCGCCCTTGGTTACCCAGGTGAGATTTCAACAGATAAAAACACTGCAATTCTCTTCGGTGTACTTTCAACAATTCCATTTATCTACATTCTCTACGTTCTCTTTGTAGAGCTAGGTAAATCTCTAGAGCGCCAGCCAGATGGCGTTGCAGATACTGTGAAGCGCTTGCGTCTTCTCCTGATTGCAACATGGGGCGTCTATCCCAT RYVDWLLTVPLLLVEVVAVLALAKEVSRSLIMRLVPASAAMIALGYPGEISTDKNTAILFGVLSTIPFIYILYVLFVELGKSLERQPDGVADTVKRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACGTGGATTGG------------------------CTTCTCACAGTCCCACTTCTCCTTGTTGAAGTTGTCGCAGTATTAGCACTT---------GCT---AAGGAAGTTTCACGT---TCACTC------------------------------------ATCATGCGC---CTCGTTCCAGCTTCAGCTGCAATGATCGCCCTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCA---ACAGAT---------AAA---------------------------AACACTGCA------------------ATTCTCTTC---GGTGTACTTTCAACAATTCCATTTATCTACATTCTCTACGTTCTC---------------TTT------GTA---GAGCTAGGTAAATCTCTAGAGCGCCAG---------------CCAGATGGCGTT---GCA---GAT---ACT---GTG---AAG---CGCTTG---CGTCTTCTCCTGATTGCA---------------------------------------------------------------ACATGG---------GGCGTCTATCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLLLVEVVAVLAL---A-KEVSR-SL------------IMR-LVPASAAMIALGYPGE---I--------------------------S-TD---K---------NTA------ILF-GVLSTIPFIYILYVL-----F--V-ELGKSLERQ-----PDGV-A-D-T-V-K-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663750 [Actinorhodopsin] SCGC_AAA027M14_Actinobacteria_HQ663750 gi|325163099|gb|HQ663750| Actinobacterium SCGC AAA027M14 rhodopsin gene, partial cds Actinobacterium SCGC AAA027M14 rhodopsin gene, partial cds HQ663750 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:932041 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Mendota other freshwater 46.0095 -89.7006 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTTGATTGGCTACTTACTGTTCCACTTCTACTCGTAGAAGTTATTGCTGTACTTGCACTTGCTGCGGCAGTTGCGAAGTCACTAATCATGCGCCTCGTCCCAGCAGCAGCTGCGATGATCGCTCTTGGTTACCCAGGTGAAATTTCATCTGACCAGAACACACAGGTTCTCTACGGTGTTCTTTCAACAATTCCATTCATCTACATCCTCTACGTACTATTCGTAGAGCTTGGAAAGTCATTGGAGCGCCAGCCAGCTGGTGTTGCAGAGACTGTTGGACGTCTACGTCTTCTTCTCATCGCAACATGGGGTGTCTACCCCATGGTCATA YVDWLLTVPLLLVEVIAVLALAAAVAKSLIMRLVPAAAAMIALGYPGEISSDQNTQVLYGVLSTIPFIYILYVLFVELGKSLERQPAGVAETVGRLRLLLIATWGVYPMVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTTGATTGG------------------------CTACTTACTGTTCCACTTCTACTCGTAGAAGTTATTGCTGTACTTGCACTT---------GCT---GCGGCAGTTGCGAAG---TCACTA------------------------------------ATCATGCGC---CTCGTCCCAGCAGCAGCTGCGATGATCGCTCTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---TCTGAC---------CAG---------------------------AACACACAG------------------GTTCTCTAC---GGTGTTCTTTCAACAATTCCATTCATCTACATCCTCTACGTACTA---------------TTC------GTA---GAGCTTGGAAAGTCATTGGAGCGCCAG---------------CCAGCTGGTGTT---GCA---GAG---ACT---GTT---GGA---CGTCTA---CGTCTTCTTCTCATCGCA---------------------------------------------------------------ACATGG---------GGTGTCTACCCCATGGTCATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLLVEVIAVLAL---A-AAVAK-SL------------IMR-LVPAAAAMIALGYPGE---I--------------------------S-SD---Q---------NTQ------VLY-GVLSTIPFIYILYVL-----F--V-ELGKSLERQ-----PAGV-A-E-T-V-G-RL-RLLLIA---------------------TW---GVYPMVI----------------------------------------------------------------------------------------------- [Actinorhodopsin]_HE646859 [Actinorhodopsin] clone_QixNWEx3_HE646859 gi|363805884|gb|HE646859| Uncultured bacterium partial actR gene for Actinorhodopsin, clone QixNWEx3. Uncultured bacterium partial actR gene for Actinorhodopsin, clone QixNWEx3. HE646859 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 19-nov-12 2010 Lake Stechlin surface water other freshwater 53.17 13.03 Environmental actinorhodopsin expression revealed by a new in situ filtration and fixation sampler Wurzbacher,C., Salka,I. and Grossart,H.P. Environ Microbiol Rep 4 (5), 491-497 (2012) 23760893 acI-like TATCGGTATGTTGACTGGGTACTAACAGTGCCACTACTTCTAGTTGAAGTAGTTGCAGTACTTGCATTAGCTAAGGAGCTTTCACGCTCACTTATCACGCGCCTTGTCCCAGCATCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAAATTTCATCAGACCAGAACACACAGGTTCTTTACGGTGTTCTTTCAACAATTCCATTCATCTACATCCTCTACGTACTATTCGTAGAGCTTGGTAAGTCACTCGATCGCCAGCCAGCTGGCGTTGCAGAGACAGTCGGACGGCTACGTCTGCTTCTCATCGCAACATGGGGCGTGTATCCAATA YRYVDWVLTVPLLLVEVVAVLALAKELSRSLITRLVPASAAMIALGYPGEISSDQNTQVLYGVLSTIPFIYILYVLFVELGKSLDRQPAGVAETVGRLRLLLIATWGVYPI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCGGTATGTTGACTGG------------------------GTACTAACAGTGCCACTACTTCTAGTTGAAGTAGTTGCAGTACTTGCATTA---------GCT---AAGGAGCTTTCACGC---TCACTT------------------------------------ATCACGCGC---CTTGTCCCAGCATCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---TCAGAC---------CAG---------------------------AACACACAG------------------GTTCTTTAC---GGTGTTCTTTCAACAATTCCATTCATCTACATCCTCTACGTACTA---------------TTC------GTA---GAGCTTGGTAAGTCACTCGATCGCCAG---------------CCAGCTGGCGTT---GCA---GAG---ACA---GTC---GGA---CGGCTA---CGTCTGCTTCTCATCGCA---------------------------------------------------------------ACATGG---------GGCGTGTATCCAATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYVDW--------VLTVPLLLVEVVAVLAL---A-KELSR-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-SD---Q---------NTQ------VLY-GVLSTIPFIYILYVL-----F--V-ELGKSLDRQ-----PAGV-A-E-T-V-G-RL-RLLLIA---------------------TW---GVYPI------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663761 [Actinorhodopsin] SCGC_AAA028F09_Gammaproteobacteria_HQ663761 gi|325163121|gb|HQ663761| Gamma proteobacterium SCGC AAA028F09 rhodopsin gene, partial cds Gamma proteobacterium SCGC AAA028F09 rhodopsin gene, partial cds HQ663761 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Gammaproteobacteria] taxon:938984 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Mendota other freshwater 46.0095 -89.7006 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTTGATTGGCTATTAACTGTGCCTCTACTACTTGTAGAAGTTATTGCAGTTCTAGCTCTTGCTAAGGAAGTTTCACGTTCACTTATCATGCGCCTTGTTCCAGCATCAGCTGCGATGATCGCACTTGGATACCCAGGTGAAATCTCAAGCGATCAGAACACACAGGTTCTATACGGTGTACTTTCAACACTTCCATTCATCTACATCCTCTACGTACTATTCGTAGAGCTTGGCAAGTCACTTGAGCGTCAGCCAGCTGGCGTTGCAGAGACAATTGGTCGCCTACGTTTGCTACTTATCGCAACATGGGGCGTCTACCCGATGGTCATA YVDWLLTVPLLLVEVIAVLALAKEVSRSLIMRLVPASAAMIALGYPGEISSDQNTQVLYGVLSTLPFIYILYVLFVELGKSLERQPAGVAETIGRLRLLLIATWGVYPMVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTTGATTGG------------------------CTATTAACTGTGCCTCTACTACTTGTAGAAGTTATTGCAGTTCTAGCTCTT---------GCT---AAGGAAGTTTCACGT---TCACTT------------------------------------ATCATGCGC---CTTGTTCCAGCATCAGCTGCGATGATCGCACTTGGATACCCAGGTGAA---------ATC------------------------------------------------------------------------------TCA---AGCGAT---------CAG---------------------------AACACACAG------------------GTTCTATAC---GGTGTACTTTCAACACTTCCATTCATCTACATCCTCTACGTACTA---------------TTC------GTA---GAGCTTGGCAAGTCACTTGAGCGTCAG---------------CCAGCTGGCGTT---GCA---GAG---ACA---ATT---GGT---CGCCTA---CGTTTGCTACTTATCGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCGATGGTCATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------IMR-LVPASAAMIALGYPGE---I--------------------------S-SD---Q---------NTQ------VLY-GVLSTLPFIYILYVL-----F--V-ELGKSLERQ-----PAGV-A-E-T-I-G-RL-RLLLIA---------------------TW---GVYPMVI----------------------------------------------------------------------------------------------- [Actinorhodopsin]_FJ545183 [Actinorhodopsin] clone_Erie_LG_E2_rhodopsin_gene_partial_cds_FJ545183 gi|224384041|gb|FJ545183| Uncultured microorganism clone Erie.LG.E2 putative rhodopsin gene, partial cds. Uncultured microorganism clone Erie.LG.E2 putative rhodopsin gene, partial cds. FJ545183 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juil-05 Lake Erie other freshwater 41.9461 -81.6461 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTGCTCACAGTGCCACTTCTTCTTGTTGAAGTGATTGCTGTTTTGGCGTTAGCAAAGGAAGTTGCCAAGTCACTTATCGTTCGACTTGTTCCTGCATCAGCAGCGATGATCGCCCTTGGTTACCCAGGTGAGATTTCAAGCGATCAAAACACCCAGGTTCTATACGGTGTTCTTTCAACAATCCCATTCCTTTACATCCTCTACGTACTATTCGTAGAGCTTGGAAAGTCATTGGAGCGTCAACCAGCAGGAGTAGCGGAGACCGTAGGTCGTTTGCGCTTGCTTTTGATCGCTACG LLTVPLLLVEVIAVLALAKEVAKSLIVRLVPASAAMIALGYPGEISSDQNTQVLYGVLSTIPFLYILYVLFVELGKSLERQPAGVAETVGRLRLLLIAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTCACAGTGCCACTTCTTCTTGTTGAAGTGATTGCTGTTTTGGCGTTA---------GCA---AAGGAAGTTGCCAAG---TCACTT------------------------------------ATCGTTCGA---CTTGTTCCTGCATCAGCAGCGATGATCGCCCTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCA---AGCGAT---------CAA---------------------------AACACCCAG------------------GTTCTATAC---GGTGTTCTTTCAACAATCCCATTCCTTTACATCCTCTACGTACTA---------------TTC------GTA---GAGCTTGGAAAGTCATTGGAGCGTCAA---------------CCAGCAGGAGTA---GCG---GAG---ACC---GTA---GGT---CGTTTG---CGCTTGCTTTTGATCGCT---------------------------------------------------------------ACG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLLVEVIAVLAL---A-KEVAK-SL------------IVR-LVPASAAMIALGYPGE---I--------------------------S-SD---Q---------NTQ------VLY-GVLSTIPFLYILYVL-----F--V-ELGKSLERQ-----PAGV-A-E-T-V-G-RL-RLLLIA---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601735 [Actinorhodopsin] clone_26-8_KC601735 gi|523706464|gb|KC601735| Uncultured bacterium clone 26-8 actinorhodopsin gene, partial cds. Uncultured bacterium clone 26-8 actinorhodopsin gene, partial cds. KC601735 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 oligo-mesotrophic deep submontane freshwater lake other freshwater 47.82 13.38 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 AGCTATGTGGACTGGATCCTTACAGTGCCACTACTTCTTGTTGAAGTAATCGCCGTATTAGCTCTTGCTAAAGAAGCATCTCGCTCACTAATCACACGCCTCGTTCCTGCATCAGCAGCAATGATCGCACTTGGTTATCCAGGAGAAGTTTCTGCAGACCAGGGTGAAAAGATTATGTGGGGCGTTCTCTCCACAATTCCTTTCCTCTACATCCTTTATGTTCTATTCGTAGAGCTTGGTAAGTCACTAGATCGTCAGCCTGAGGGAGTTGCAGCCACAATTGGTCGCCTCCGTCTCCTGCTGATTGCAACATGGGGCGTCTACCCCAT SYVDWILTVPLLLVEVIAVLALAKEASRSLITRLVPASAAMIALGYPGEVSADQGEKIMWGVLSTIPFLYILYVLFVELGKSLDRQPEGVAATIGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATGTGGACTGG------------------------ATCCTTACAGTGCCACTACTTCTTGTTGAAGTAATCGCCGTATTAGCTCTT---------GCT---AAAGAAGCATCTCGC---TCACTA------------------------------------ATCACACGC---CTCGTTCCTGCATCAGCAGCAATGATCGCACTTGGTTATCCAGGAGAA---------GTT------------------------------------------------------------------------------TCT---GCAGAC---------CAG---------------------------GGTGAAAAG------------------ATTATGTGG---GGCGTTCTCTCCACAATTCCTTTCCTCTACATCCTTTATGTTCTA---------------TTC------GTA---GAGCTTGGTAAGTCACTAGATCGTCAG---------------CCTGAGGGAGTT---GCA---GCC---ACA---ATT---GGT---CGCCTC---CGTCTCCTGCTGATTGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYVDW--------ILTVPLLLVEVIAVLAL---A-KEASR-SL------------ITR-LVPASAAMIALGYPGE---V--------------------------S-AD---Q---------GEK------IMW-GVLSTIPFLYILYVL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601742 [Actinorhodopsin] clone_28-1_KC601742 gi|523706478|gb|KC601742| Uncultured bacterium clone 28-1 actinorhodopsin gene, partial cds. Uncultured bacterium clone 28-1 actinorhodopsin gene, partial cds. KC601742 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 oligo-mesotrophic deep submontane freshwater lake other freshwater 47.82 13.38 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 AGCTATGTGGACTGGATCCTTACAGTGCCACTACTTCTTGTTGAAGTAATCGCCGTATTAGCTCTTGCTAAAGAAGCATCTCGCTCACTAATCACACGCCTCGTTCCTGCATCAGCAGCAATGATCGCACTTGGTTATCCAGGAGAAGTTTCTGCAGACCAGGGTGAAAAGATTATGTGGGGCGTTCTCTCCACAATTCCTTTCCTCTACATCCTTTATGTTCTATTCGTAGAGCTTGGTAAGTCACTAGATCGTCAGCCTGAGGGAGTTGCAGCCACAATTGGTCGCCTCCGTCTCCTGCTGATTGCAACATGGGGCGTCTACCCCAT SYVDWILTVPLLLVEVIAVLALAKEASRSLITRLVPASAAMIALGYPGEVSADQGEKIMWGVLSTIPFLYILYVLFVELGKSLDRQPEGVAATIGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTATGTGGACTGG------------------------ATCCTTACAGTGCCACTACTTCTTGTTGAAGTAATCGCCGTATTAGCTCTT---------GCT---AAAGAAGCATCTCGC---TCACTA------------------------------------ATCACACGC---CTCGTTCCTGCATCAGCAGCAATGATCGCACTTGGTTATCCAGGAGAA---------GTT------------------------------------------------------------------------------TCT---GCAGAC---------CAG---------------------------GGTGAAAAG------------------ATTATGTGG---GGCGTTCTCTCCACAATTCCTTTCCTCTACATCCTTTATGTTCTA---------------TTC------GTA---GAGCTTGGTAAGTCACTAGATCGTCAG---------------CCTGAGGGAGTT---GCA---GCC---ACA---ATT---GGT---CGCCTC---CGTCTCCTGCTGATTGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYVDW--------ILTVPLLLVEVIAVLAL---A-KEASR-SL------------ITR-LVPASAAMIALGYPGE---V--------------------------S-AD---Q---------GEK------IMW-GVLSTIPFLYILYVL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601750 [Actinorhodopsin] clone_9-2_KC601750 gi|523706494|gb|KC601750| Uncultured bacterium clone 9-2 actinorhodopsin gene, partial cds. Uncultured bacterium clone 9-2 actinorhodopsin gene, partial cds. KC601750 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 oligo-mesotrophic deep submontane freshwater lake other freshwater 47.82 13.38 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGTTACGTGGACTGGATCCTTACAGTGCCACTACTTCTTGTTGAAGTAATCGCCGTATTAGCTCTTGCTAAAGAAGCATCTCGCTCACTAATCACACGCCTCGTTCCTGCATCAGCAGCAATGATCGCACTTGGTTATCCAGGAGAAGTTTCTGCAGACCAGGGTGAAAAGATTATGTGGGGCGTTCTCTCCACAATTCCTTTCCTCTACATCCTTTATGTTCTATTCGTAGAGCTTGGTAAGTCACTAGATCGTCAGCCTGAGGGAGTTGCAGCCACAATTGGTCGCCTCCGTCTCCTGCTGATTGCAACATGGGGCGTCTACCCCAT RYVDWILTVPLLLVEVIAVLALAKEASRSLITRLVPASAAMIALGYPGEVSADQGEKIMWGVLSTIPFLYILYVLFVELGKSLDRQPEGVAATIGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTACGTGGACTGG------------------------ATCCTTACAGTGCCACTACTTCTTGTTGAAGTAATCGCCGTATTAGCTCTT---------GCT---AAAGAAGCATCTCGC---TCACTA------------------------------------ATCACACGC---CTCGTTCCTGCATCAGCAGCAATGATCGCACTTGGTTATCCAGGAGAA---------GTT------------------------------------------------------------------------------TCT---GCAGAC---------CAG---------------------------GGTGAAAAG------------------ATTATGTGG---GGCGTTCTCTCCACAATTCCTTTCCTCTACATCCTTTATGTTCTA---------------TTC------GTA---GAGCTTGGTAAGTCACTAGATCGTCAG---------------CCTGAGGGAGTT---GCA---GCC---ACA---ATT---GGT---CGCCTC---CGTCTCCTGCTGATTGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------ILTVPLLLVEVIAVLAL---A-KEASR-SL------------ITR-LVPASAAMIALGYPGE---V--------------------------S-AD---Q---------GEK------IMW-GVLSTIPFLYILYVL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_FJ545186 [Actinorhodopsin] clone_Erie_LG_H2_rhodopsin_gene_partial_cds_FJ545186 gi|224384047|gb|FJ545186| Uncultured microorganism clone Erie.LG.H2 putative rhodopsin gene, partial cds. Uncultured microorganism clone Erie.LG.H2 putative rhodopsin gene, partial cds. FJ545186 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juil-05 Lake Erie other freshwater 41.9461 -81.6461 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na ATCCTTACAGTGCCACTACTTCTTGTTGAGGTAATCGCTGTATTAGCTCTTGCTAAAGAAGCAGCTCGCTCACTAATCACACGCCTCGTTCCTGCATCAGCAGCAATGATTGCACTTGGTTATCCAGGAGAAGTTTCTTCAGATCAGGGAGATAAGATTATGTGGGGCGTTCTCTCCACAATTCCATTCCTCTACATCCTTTATGTTCTCTTCGTAGAGCTTGGTAAGTCCCTAGATCGTCAGCCTGAGGGAGTTGCAGCCACAATTGGTCGCCTCCGTCTCCTGCTGATTGCAACA ILTVPLLLVEVIAVLALAKEAARSLITRLVPASAAMIALGYPGEVSSDQGDKIMWGVLSTIPFLYILYVLFVELGKSLDRQPEGVAATIGRLRLLLIAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCTTACAGTGCCACTACTTCTTGTTGAGGTAATCGCTGTATTAGCTCTT---------GCT---AAAGAAGCAGCTCGC---TCACTA------------------------------------ATCACACGC---CTCGTTCCTGCATCAGCAGCAATGATTGCACTTGGTTATCCAGGAGAA---------GTT------------------------------------------------------------------------------TCT---TCAGAT---------CAG---------------------------GGAGATAAG------------------ATTATGTGG---GGCGTTCTCTCCACAATTCCATTCCTCTACATCCTTTATGTTCTC---------------TTC------GTA---GAGCTTGGTAAGTCCCTAGATCGTCAG---------------CCTGAGGGAGTT---GCA---GCC---ACA---ATT---GGT---CGCCTC---CGTCTCCTGCTGATTGCA---------------------------------------------------------------ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLLLVEVIAVLAL---A-KEAAR-SL------------ITR-LVPASAAMIALGYPGE---V--------------------------S-SD---Q---------GDK------IMW-GVLSTIPFLYILYVL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-I-G-RL-RLLLIA---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601729 [Actinorhodopsin] clone_25-8_KC601729 gi|523706452|gb|KC601729| Uncultured bacterium clone 25-8 actinorhodopsin gene, partial cds. Uncultured bacterium clone 25-8 actinorhodopsin gene, partial cds. KC601729 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 oligo-mesotrophic deep submontane freshwater lake other freshwater 47.82 13.38 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGGTATGTGGACTGGATTCTGACCGTACCTCTTCTTCTTGTAGAGGTAGTAGCAGTATTAGCTCTTGCTAAGGCAGCGGCTTCTTCATTAATCACCCGCCTAGTACCAGCATCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAGATTTCAACAGATAACAACACCAAGGTTCTATGGGGTGTTCTTTCAACAATACCTTTCCTATACATTCTTTACGTATTGTTCGTTGAGCTTTCAAAGTCTCTAGATCGTCAACCAGCAGGAGTTGCAGCAACCATTGGTCGCTTGCGCTTGCTTTTGATCGCAACATGGGGCGTCTATCCCAT RYVDWILTVPLLLVEVVAVLALAKAAASSLITRLVPASAAMIALGYPGEISTDNNTKVLWGVLSTIPFLYILYVLFVELSKSLDRQPAGVAATIGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTATGTGGACTGG------------------------ATTCTGACCGTACCTCTTCTTCTTGTAGAGGTAGTAGCAGTATTAGCTCTT---------GCT---AAGGCAGCGGCTTCT---TCATTA------------------------------------ATCACCCGC---CTAGTACCAGCATCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCA---ACAGAT---------AAC---------------------------AACACCAAG------------------GTTCTATGG---GGTGTTCTTTCAACAATACCTTTCCTATACATTCTTTACGTATTG---------------TTC------GTT---GAGCTTTCAAAGTCTCTAGATCGTCAA---------------CCAGCAGGAGTT---GCA---GCA---ACC---ATT---GGT---CGCTTG---CGCTTGCTTTTGATCGCA---------------------------------------------------------------ACATGG---------GGCGTCTATCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------ILTVPLLLVEVVAVLAL---A-KAAAS-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-TD---N---------NTK------VLW-GVLSTIPFLYILYVL-----F--V-ELSKSLDRQ-----PAGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601752 [Actinorhodopsin] clone_9-4_KC601752 gi|523706498|gb|KC601752| Uncultured bacterium clone 9-4 actinorhodopsin gene, partial cds. Uncultured bacterium clone 9-4 actinorhodopsin gene, partial cds. KC601752 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 oligo-mesotrophic deep submontane freshwater lake other freshwater 47.82 13.38 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGGTATGTTGATTGGATTCTGACCGTACCTCTTCTTCTTGTAGAGGTAGTAGCAGTATTAGCTCTTGCTAAGGCAGCGGCTTCTTCATTAATCACCCGCCTAGTACCAGCATCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAGATTTCAACAGATAACAACACCAAGGTTCTATGGGGTGTTCTTTCAACAATACCTTTCCTATACATTCTTTACGTATTGTTCGTTGAGCTTTCAAAGTCTCTAGATCGTCAACCAGCAGGAGTTGCAGCAACCATTGGTCGCTTGCGCTTGCTTTTGATCGCAACATGGGGCGTCTACCCCAT RYVDWILTVPLLLVEVVAVLALAKAAASSLITRLVPASAAMIALGYPGEISTDNNTKVLWGVLSTIPFLYILYVLFVELSKSLDRQPAGVAATIGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTATGTTGATTGG------------------------ATTCTGACCGTACCTCTTCTTCTTGTAGAGGTAGTAGCAGTATTAGCTCTT---------GCT---AAGGCAGCGGCTTCT---TCATTA------------------------------------ATCACCCGC---CTAGTACCAGCATCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCA---ACAGAT---------AAC---------------------------AACACCAAG------------------GTTCTATGG---GGTGTTCTTTCAACAATACCTTTCCTATACATTCTTTACGTATTG---------------TTC------GTT---GAGCTTTCAAAGTCTCTAGATCGTCAA---------------CCAGCAGGAGTT---GCA---GCA---ACC---ATT---GGT---CGCTTG---CGCTTGCTTTTGATCGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------ILTVPLLLVEVVAVLAL---A-KAAAS-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-TD---N---------NTK------VLW-GVLSTIPFLYILYVL-----F--V-ELSKSLDRQ-----PAGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601744 [Actinorhodopsin] clone_28-4_KC601744 gi|523706482|gb|KC601744| Uncultured bacterium clone 28-4 actinorhodopsin gene, partial cds. Uncultured bacterium clone 28-4 actinorhodopsin gene, partial cds. KC601744 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 oligo-mesotrophic deep submontane freshwater lake other freshwater 47.82 13.38 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGGTATGTGGACTGGATTCTGACCGTACCTCTTCTTCTTGTAGAGGTAGTAGCAGTATTAGCTCTTGCTAAGGCAGCGGCTTCTTCATTAATCACCCGCTTAGTACCAGCATCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAGATTTCAACAGATAACAACACCAAGGTTCTATGGGGTGTTCTTTCAACAATACCTTTCCTATACATTCTTTACGTATTATTCGTTGAGCTTTCAAAGTCTCTAGATCGTCAACCAGCAGGAGTTGCAGCAACCATTGGTCGCTTGCGCTTGCTTTTGATCGCAACATGGGGTGTCTATCCCAT RYVDWILTVPLLLVEVVAVLALAKAAASSLITRLVPASAAMIALGYPGEISTDNNTKVLWGVLSTIPFLYILYVLFVELSKSLDRQPAGVAATIGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTATGTGGACTGG------------------------ATTCTGACCGTACCTCTTCTTCTTGTAGAGGTAGTAGCAGTATTAGCTCTT---------GCT---AAGGCAGCGGCTTCT---TCATTA------------------------------------ATCACCCGC---TTAGTACCAGCATCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCA---ACAGAT---------AAC---------------------------AACACCAAG------------------GTTCTATGG---GGTGTTCTTTCAACAATACCTTTCCTATACATTCTTTACGTATTA---------------TTC------GTT---GAGCTTTCAAAGTCTCTAGATCGTCAA---------------CCAGCAGGAGTT---GCA---GCA---ACC---ATT---GGT---CGCTTG---CGCTTGCTTTTGATCGCA---------------------------------------------------------------ACATGG---------GGTGTCTATCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------ILTVPLLLVEVVAVLAL---A-KAAAS-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-TD---N---------NTK------VLW-GVLSTIPFLYILYVL-----F--V-ELSKSLDRQ-----PAGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601734 [Actinorhodopsin] clone_26-7_KC601734 gi|523706462|gb|KC601734| Uncultured bacterium clone 26-7 actinorhodopsin gene, partial cds. Uncultured bacterium clone 26-7 actinorhodopsin gene, partial cds. KC601734 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 oligo-mesotrophic deep submontane freshwater lake other freshwater 47.82 13.38 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGGTATGTGGACTGGATTCTGACCGTACCTCTTCTTCTTGTAGAGGTAGTAGCAGTATTAGCTCTTGCTAAGGCAGCGGCTTCTTCATTAATCACCCGCTTAGTACCAGCATCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAGATTTCAACAGATAACAACACCAAGGTTCTATGGGGTGTTCTTTCAACAATACCTTTCCTATACATTCTTTACGTATTATTCGTTGAGCTTTCAAAGTCTCTAGATCGTCAACCAGCAGGAGTTGCAGCAACCATTGGTCGCTTGCGCTTGCTTTTGATCGCAACATGGGGCGTATATCCGAT RYVDWILTVPLLLVEVVAVLALAKAAASSLITRLVPASAAMIALGYPGEISTDNNTKVLWGVLSTIPFLYILYVLFVELSKSLDRQPAGVAATIGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTATGTGGACTGG------------------------ATTCTGACCGTACCTCTTCTTCTTGTAGAGGTAGTAGCAGTATTAGCTCTT---------GCT---AAGGCAGCGGCTTCT---TCATTA------------------------------------ATCACCCGC---TTAGTACCAGCATCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCA---ACAGAT---------AAC---------------------------AACACCAAG------------------GTTCTATGG---GGTGTTCTTTCAACAATACCTTTCCTATACATTCTTTACGTATTA---------------TTC------GTT---GAGCTTTCAAAGTCTCTAGATCGTCAA---------------CCAGCAGGAGTT---GCA---GCA---ACC---ATT---GGT---CGCTTG---CGCTTGCTTTTGATCGCA---------------------------------------------------------------ACATGG---------GGCGTATATCCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------ILTVPLLLVEVVAVLAL---A-KAAAS-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-TD---N---------NTK------VLW-GVLSTIPFLYILYVL-----F--V-ELSKSLDRQ-----PAGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HE646818 [Actinorhodopsin] clone_QitNWEx3_HE646818 gi|363805802|gb|HE646818| Uncultured bacterium partial actR gene for Actinorhodopsin, clone QitNWEx3. Uncultured bacterium partial actR gene for Actinorhodopsin, clone QitNWEx3. HE646818 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 19-nov-12 2010 Lake Stechlin surface water other freshwater 53.17 13.03 Environmental actinorhodopsin expression revealed by a new in situ filtration and fixation sampler Wurzbacher,C., Salka,I. and Grossart,H.P. Environ Microbiol Rep 4 (5), 491-497 (2012) 23760893 acI-like TATCGGTATGTTGACTGGATCCTTACCGTACCTCTTCTTCTTGTAGAGGTAGTAGCAGTATTAGCTCTTGCTAAGGCAGCGGCTTCTTCATTAATCACCCGCTTAGTACCAGCATCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAGATTTCAACAGATAACAACACCAAGGTTCTATGGGGTGTTCTTTCAACAATACCTTTCCTATACATTCTTTACGTATTATTCGTTGAGCTTTCAAAGTCTCTAGATCGTCAACCAGCAGGAGTTGCAGCAACCATTGGTCGCTTGCGCTTGCTTTTGATCGCGACATGGGGCGTGTACCCGATA YRYVDWILTVPLLLVEVVAVLALAKAAASSLITRLVPASAAMIALGYPGEISTDNNTKVLWGVLSTIPFLYILYVLFVELSKSLDRQPAGVAATIGRLRLLLIATWGVYPI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCGGTATGTTGACTGG------------------------ATCCTTACCGTACCTCTTCTTCTTGTAGAGGTAGTAGCAGTATTAGCTCTT---------GCT---AAGGCAGCGGCTTCT---TCATTA------------------------------------ATCACCCGC---TTAGTACCAGCATCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCA---ACAGAT---------AAC---------------------------AACACCAAG------------------GTTCTATGG---GGTGTTCTTTCAACAATACCTTTCCTATACATTCTTTACGTATTA---------------TTC------GTT---GAGCTTTCAAAGTCTCTAGATCGTCAA---------------CCAGCAGGAGTT---GCA---GCA---ACC---ATT---GGT---CGCTTG---CGCTTGCTTTTGATCGCG---------------------------------------------------------------ACATGG---------GGCGTGTACCCGATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYVDW--------ILTVPLLLVEVVAVLAL---A-KAAAS-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-TD---N---------NTK------VLW-GVLSTIPFLYILYVL-----F--V-ELSKSLDRQ-----PAGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVYPI------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601732 [Actinorhodopsin] clone_26-3_KC601732 gi|523706458|gb|KC601732| Uncultured bacterium clone 26-3 actinorhodopsin gene, partial cds. Uncultured bacterium clone 26-3 actinorhodopsin gene, partial cds. KC601732 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 oligo-mesotrophic deep submontane freshwater lake other freshwater 47.82 13.38 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGTTATGTGGACTGGATTCTGACCGTACCTCTTCTTCTTGTAGAGGTAGTAGCAGTATTAGCTCTTGCTAAGGCAGCGGCTTCTTCATTAATCACCCGCTTAGTACCAGCATCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAGATTTCAACAGATAACAACACCAAGGTTCTATGGGGTGTTCTTTCAACAATACCTTTCCTATACATTCTTTACGTATTATTCGTTGAGCTTTCAAAGTCTCTAGATCGTCAACCAGCAGGAGTTGCAGCAACAATTGGTCGCTTGCGCTTGCTTTTGATCGCAACATGGGGCGTCTACCCGAT RYVDWILTVPLLLVEVVAVLALAKAAASSLITRLVPASAAMIALGYPGEISTDNNTKVLWGVLSTIPFLYILYVLFVELSKSLDRQPAGVAATIGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTATGTGGACTGG------------------------ATTCTGACCGTACCTCTTCTTCTTGTAGAGGTAGTAGCAGTATTAGCTCTT---------GCT---AAGGCAGCGGCTTCT---TCATTA------------------------------------ATCACCCGC---TTAGTACCAGCATCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCA---ACAGAT---------AAC---------------------------AACACCAAG------------------GTTCTATGG---GGTGTTCTTTCAACAATACCTTTCCTATACATTCTTTACGTATTA---------------TTC------GTT---GAGCTTTCAAAGTCTCTAGATCGTCAA---------------CCAGCAGGAGTT---GCA---GCA---ACA---ATT---GGT---CGCTTG---CGCTTGCTTTTGATCGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------ILTVPLLLVEVVAVLAL---A-KAAAS-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-TD---N---------NTK------VLW-GVLSTIPFLYILYVL-----F--V-ELSKSLDRQ-----PAGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HE646849 [Actinorhodopsin] clone_QiwNWEx3_HE646849 gi|363805864|gb|HE646849| Uncultured bacterium partial actR gene for Actinorhodopsin, clone QiwNWEx3. Uncultured bacterium partial actR gene for Actinorhodopsin, clone QiwNWEx3. HE646849 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 19-nov-12 2010 Lake Stechlin surface water other freshwater 53.17 13.03 Environmental actinorhodopsin expression revealed by a new in situ filtration and fixation sampler Wurzbacher,C., Salka,I. and Grossart,H.P. Environ Microbiol Rep 4 (5), 491-497 (2012) 23760893 acI-like TATCGATACGTTGACTGGATTCTGACCGTACCTCTTCTTCTAGTTGAGGTAGTAGCAGTATTAGCTCTTGCTAAGGCAGCGGCTTCTTCATTAATCGCCCGCTTAGTACCAGCATCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAGATTTCAACAGATAACAACACCAAGGTTCTATGGGGTGTTCTTTCAACAATACCTTTCCTATACATTCTTTACGTATTATTCGTTGAGCTTTCAAAGTCTCTAGATCGTCAACCAGCAGGAGTTGCAGCAACCATTGGTCGCTTGCGCTTGCTTTTGATCGCAACATGGGGAGTCTACCCTATA YRYVDWILTVPLLLVEVVAVLALAKAAASSLIARLVPASAAMIALGYPGEISTDNNTKVLWGVLSTIPFLYILYVLFVELSKSLDRQPAGVAATIGRLRLLLIATWGVYPI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCGATACGTTGACTGG------------------------ATTCTGACCGTACCTCTTCTTCTAGTTGAGGTAGTAGCAGTATTAGCTCTT---------GCT---AAGGCAGCGGCTTCT---TCATTA------------------------------------ATCGCCCGC---TTAGTACCAGCATCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCA---ACAGAT---------AAC---------------------------AACACCAAG------------------GTTCTATGG---GGTGTTCTTTCAACAATACCTTTCCTATACATTCTTTACGTATTA---------------TTC------GTT---GAGCTTTCAAAGTCTCTAGATCGTCAA---------------CCAGCAGGAGTT---GCA---GCA---ACC---ATT---GGT---CGCTTG---CGCTTGCTTTTGATCGCA---------------------------------------------------------------ACATGG---------GGAGTCTACCCTATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYVDW--------ILTVPLLLVEVVAVLAL---A-KAAAS-SL------------IAR-LVPASAAMIALGYPGE---I--------------------------S-TD---N---------NTK------VLW-GVLSTIPFLYILYVL-----F--V-ELSKSLDRQ-----PAGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVYPI------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663756 [Actinorhodopsin] SCGC_AAA028C04_Actinobacteria_HQ663756 gi|325163111|gb|HQ663756| Actinobacterium SCGC AAA028C04 rhodopsin gene, partial cds Actinobacterium SCGC AAA028C04 rhodopsin gene, partial cds HQ663756 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938444 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Mendota other freshwater 46.0095 -89.7006 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) ATTCTTACAGTACCTCTTCTTCTAGTAGAGGTGGTAGCAGTATTAGCTCTTGCTAAAGCAGCGGCTTCTTCATTAATCAACCGCCTAGTACCAGCATCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAGATTTCAACAGATAACAACACCAAGGTTCTATGGGGTGTTCTTTCAACAATTCCTTTCCTATACATTCTTTACGTATTATTCGTTGAGCTTTCAAAGTCTCTAGATCGTCAACCAGCAGGAGTTGCAGCAACCATTGGTCGCTTGCGCTTGCTTTTGATCGCAACATGGGGAGTATAC ILTVPLLLVEVVAVLALAKAAASSLINRLVPASAAMIALGYPGEISTDNNTKVLWGVLSTIPFLYILYVLFVELSKSLDRQPAGVAATIGRLRLLLIATWGVY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTACAGTACCTCTTCTTCTAGTAGAGGTGGTAGCAGTATTAGCTCTT---------GCT---AAAGCAGCGGCTTCT---TCATTA------------------------------------ATCAACCGC---CTAGTACCAGCATCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCA---ACAGAT---------AAC---------------------------AACACCAAG------------------GTTCTATGG---GGTGTTCTTTCAACAATTCCTTTCCTATACATTCTTTACGTATTA---------------TTC------GTT---GAGCTTTCAAAGTCTCTAGATCGTCAA---------------CCAGCAGGAGTT---GCA---GCA---ACC---ATT---GGT---CGCTTG---CGCTTGCTTTTGATCGCA---------------------------------------------------------------ACATGG---------GGAGTATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLLLVEVVAVLAL---A-KAAAS-SL------------INR-LVPASAAMIALGYPGE---I--------------------------S-TD---N---------NTK------VLW-GVLSTIPFLYILYVL-----F--V-ELSKSLDRQ-----PAGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVY--------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663760 [Actinorhodopsin] SCGC_AAA028E22_Actinobacteria_HQ663760 gi|325163119|gb|HQ663760| Actinobacterium SCGC AAA028E22 rhodopsin gene, partial cds Actinobacterium SCGC AAA028E22 rhodopsin gene, partial cds HQ663760 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938451 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Mendota other freshwater 46.0095 -89.7006 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTTGATTGGATCCTTACCGTACCTCTTCTTCTAGTAGAGGTAGTAGCAGTATTAGCTCTTGCTAAAGCAGCGGCTTCTTCATTAATCAACCGCCTAGTACCAGCATCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAGATTTCAACAGATAACAACACCAAGGTTCTATGGGGTGTTCTTTCAACAATACCTTTCCTATACATTCTTTACGTATTATTCGTTGAGCTTTCAAAGTCTCTAGATCGTCAACCAGCAGGAGTTGCAGCAACCATTGGTCGCTTGCGCTTGCTTTTGATCGCAACATGGGGCGTCTACCCGATGGTCATA YVDWILTVPLLLVEVVAVLALAKAAASSLINRLVPASAAMIALGYPGEISTDNNTKVLWGVLSTIPFLYILYVLFVELSKSLDRQPAGVAATIGRLRLLLIATWGVYPMVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTTGATTGG------------------------ATCCTTACCGTACCTCTTCTTCTAGTAGAGGTAGTAGCAGTATTAGCTCTT---------GCT---AAAGCAGCGGCTTCT---TCATTA------------------------------------ATCAACCGC---CTAGTACCAGCATCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCA---ACAGAT---------AAC---------------------------AACACCAAG------------------GTTCTATGG---GGTGTTCTTTCAACAATACCTTTCCTATACATTCTTTACGTATTA---------------TTC------GTT---GAGCTTTCAAAGTCTCTAGATCGTCAA---------------CCAGCAGGAGTT---GCA---GCA---ACC---ATT---GGT---CGCTTG---CGCTTGCTTTTGATCGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCGATGGTCATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------ILTVPLLLVEVVAVLAL---A-KAAAS-SL------------INR-LVPASAAMIALGYPGE---I--------------------------S-TD---N---------NTK------VLW-GVLSTIPFLYILYVL-----F--V-ELSKSLDRQ-----PAGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVYPMVI----------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663737 [Actinorhodopsin] SCGC_AAA024M05_Actinobacteria_HQ663737 gi|325163074|gb|HQ663737| Actinobacterium SCGC AAA024M05 rhodopsin gene, partial cds Actinobacterium SCGC AAA024M05 rhodopsin gene, partial cds HQ663737 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938426 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Sparkling other freshwater 46.0095 -89.7006 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) GTTGATTGGATTCTTACCGTACCTCTTCTTCTAGTTGAGGTAGTAGCAGTATTAGCTCTTGCTAAGGCAGCGGCTTCTTCATTAATCACCCGCCTAGTACCAGCATCTGCTGCGATGATCGCACTTGGTTACCCAGGTGAGATTTCAACAGATAACAACACCAAGGTTCTATGGGGTGTTCTTTCAACAATACCTTTCCTATACATTCTTTACGTATTGTTCGTTGAGCTTTCAAAGTCTCTAGATCGTCAACCAGCAGGAGTTGCAGCAACCATTGGTCGCTTGCGCTTGCTTTTGATCGCAACATGGGGCGTCTACCCGATGGTC VDWILTVPLLLVEVVAVLALAKAAASSLITRLVPASAAMIALGYPGEISTDNNTKVLWGVLSTIPFLYILYVLFVELSKSLDRQPAGVAATIGRLRLLLIATWGVYPMV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGATTGG------------------------ATTCTTACCGTACCTCTTCTTCTAGTTGAGGTAGTAGCAGTATTAGCTCTT---------GCT---AAGGCAGCGGCTTCT---TCATTA------------------------------------ATCACCCGC---CTAGTACCAGCATCTGCTGCGATGATCGCACTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCA---ACAGAT---------AAC---------------------------AACACCAAG------------------GTTCTATGG---GGTGTTCTTTCAACAATACCTTTCCTATACATTCTTTACGTATTG---------------TTC------GTT---GAGCTTTCAAAGTCTCTAGATCGTCAA---------------CCAGCAGGAGTT---GCA---GCA---ACC---ATT---GGT---CGCTTG---CGCTTGCTTTTGATCGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCGATGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------ILTVPLLLVEVVAVLAL---A-KAAAS-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-TD---N---------NTK------VLW-GVLSTIPFLYILYVL-----F--V-ELSKSLDRQ-----PAGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVYPMV------------------------------------------------------------------------------------------------ [Actinorhodopsin]_FJ545174 [Actinorhodopsin] clone_Erie_LG_C1_rhodopsin_gene_partial_cds_FJ545174 gi|224384023|gb|FJ545174| Uncultured microorganism clone Erie.LG.C1 putative rhodopsin gene, partial cds. Uncultured microorganism clone Erie.LG.C1 putative rhodopsin gene, partial cds. FJ545174 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juil-05 Lake Erie other freshwater 41.9461 -81.6461 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na ATCCTTACCGTACCTCTTCTTCTAGTTGAGGTAGTAGCAGTATTAGCTCTTGCTAAGGCAGCGGCTTCTTCATTAATCAACCGCCTAGTACCAGCATCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAGATTTCAACAGATAACAACACCAAGGTTCTATGGGGTGTTCTTTCAACAATACCTTTCCTATACATTCTTTATGTATTGTTCGTTGAGCTTTCAAAGTCTCTAGATCGTCAACCAGCAGGAGTTGCAGCAACCATTGGTCGCTTGCGCTTGCTTTTGATTGGTACA ILTVPLLLVEVVAVLALAKAAASSLINRLVPASAAMIALGYPGEISTDNNTKVLWGVLSTIPFLYILYVLFVELSKSLDRQPAGVAATIGRLRLLLIGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCTTACCGTACCTCTTCTTCTAGTTGAGGTAGTAGCAGTATTAGCTCTT---------GCT---AAGGCAGCGGCTTCT---TCATTA------------------------------------ATCAACCGC---CTAGTACCAGCATCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCA---ACAGAT---------AAC---------------------------AACACCAAG------------------GTTCTATGG---GGTGTTCTTTCAACAATACCTTTCCTATACATTCTTTATGTATTG---------------TTC------GTT---GAGCTTTCAAAGTCTCTAGATCGTCAA---------------CCAGCAGGAGTT---GCA---GCA---ACC---ATT---GGT---CGCTTG---CGCTTGCTTTTGATTGGT---------------------------------------------------------------ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLLLVEVVAVLAL---A-KAAAS-SL------------INR-LVPASAAMIALGYPGE---I--------------------------S-TD---N---------NTK------VLW-GVLSTIPFLYILYVL-----F--V-ELSKSLDRQ-----PAGV-A-A-T-I-G-RL-RLLLIG---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_FJ545143 [Actinorhodopsin] clone_Superior_LG_G1_rhodopsin_gene_partial_cds_FJ545143 gi|224383961|gb|FJ545143| Uncultured microorganism clone Superior.LG.G1 putative rhodopsin gene, partial cds. Uncultured microorganism clone Superior.LG.G1 putative rhodopsin gene, partial cds. FJ545143 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juin-05 Lake Superior other freshwater 47.3 -91.67 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na ATCCTTACCGTACCTCTTCTTCTAGTTGAGGTAGTAGCAGTATTAGCTCTTGCTAAGGCAGCGGCTTCTTCATTAATCAACCGCCTAGTACCAGCATCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAGATTTCAACAGATAACAACACCAAGGTTCTATGGGGTGTTCTTTCAACAATACCTTTCCTATACATTCTTTATGTATTGTTCGTTGAGCTTTCAAAGTCTCTAGATCGTCAACCAGCAGGAGTTGCAGCAACCATTGGTCGCTTGCGCTTGCTTTTGATTGGTACA ILTVPLLLVEVVAVLALAKAAASSLINRLVPASAAMIALGYPGEISTDNNTKVLWGVLSTIPFLYILYVLFVELSKSLDRQPAGVAATIGRLRLLLIGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCTTACCGTACCTCTTCTTCTAGTTGAGGTAGTAGCAGTATTAGCTCTT---------GCT---AAGGCAGCGGCTTCT---TCATTA------------------------------------ATCAACCGC---CTAGTACCAGCATCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCA---ACAGAT---------AAC---------------------------AACACCAAG------------------GTTCTATGG---GGTGTTCTTTCAACAATACCTTTCCTATACATTCTTTATGTATTG---------------TTC------GTT---GAGCTTTCAAAGTCTCTAGATCGTCAA---------------CCAGCAGGAGTT---GCA---GCA---ACC---ATT---GGT---CGCTTG---CGCTTGCTTTTGATTGGT---------------------------------------------------------------ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLLLVEVVAVLAL---A-KAAAS-SL------------INR-LVPASAAMIALGYPGE---I--------------------------S-TD---N---------NTK------VLW-GVLSTIPFLYILYVL-----F--V-ELSKSLDRQ-----PAGV-A-A-T-I-G-RL-RLLLIG---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663730 [Actinorhodopsin] SCGC_AAA023I13_Actinobacteria_HQ663730 gi|325163060|gb|HQ663730| Actinobacterium SCGC AAA023I13 rhodopsin gene, partial cds Actinobacterium SCGC AAA023I13 rhodopsin gene, partial cds HQ663730 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; F108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938417 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Sparkling other freshwater 46.0095 -89.7006 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTAGATTGGATCCTTACAGTACCTCTTCTTCTAGTATTCCTAGTAGCAGTATTAGCTCTTGCTAAGGCAGCGGCTTCTTCATTAATCACCCGCCTAGTACCAGCATCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAGATTTCAACAGATAACAACACCAAGGTTCTATGGGGTGTTCTTTCAACAATACCTTTCCTATACATTCTTTACGTATTGTTCGTTGAGCTTTCAAAGTCTCTAGATCGTCAACCAGCAGGAGTTGCAGCAACCTATTGGTCGCTTGCGCTTGCTTTTGATCGCAACATGGGGCGTCTACCCGATGGTCAT YVDWILTVPLLLVFLVAVLALAKAAASSLITRLVPASAAMIALGYPGEISTDNNTKVLWGVLSTIPFLYILYVLFVELSKSLDRQPAGVAATYWSLALAFDRNMGRLPDGH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTAGATTGG------------------------ATCCTTACAGTACCTCTTCTTCTAGTATTCCTAGTAGCAGTATTAGCTCTT---------GCT---AAGGCAGCGGCTTCT---TCATTA------------------------------------ATCACCCGC---CTAGTACCAGCATCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCA---ACAGAT---------AAC---------------------------AACACCAAG------------------GTTCTATGG---GGTGTTCTTTCAACAATACCTTTCCTATACATTCTTTACGTATTG---------------TTC------GTT---GAGCTTTCAAAGTCTCTAGATCGTCAA---------------CCAGCAGGAGTT---GCA---GCA---ACC---TAT---TGG---TCGCTT---GCGCTTGCTTTTGATCGC---------------------------------------------------------------AACATG---------GGGCGTCTACCCGATGGTCAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------ILTVPLLLVFLVAVLAL---A-KAAAS-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-TD---N---------NTK------VLW-GVLSTIPFLYILYVL-----F--V-ELSKSLDRQ-----PAGV-A-A-T-Y-W-SL-ALAFDR---------------------NM---GRLPDGH----------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663728 [Actinorhodopsin] SCGC_AAA023D18_Actinobacteria_HQ663728 gi|325163056|gb|HQ663728| Actinobacterium SCGC AAA023D18 rhodopsin gene, partial cds Actinobacterium SCGC AAA023D18 rhodopsin gene, partial cds HQ663728 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:932037 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Sparkling other freshwater 46.0095 -89.7006 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTTGATTGGATCCTTACAGTACCTCTTCTTCTAGTAGAGGTAGTAGCAGTATTAGCTCTTGCTAAGGCAGCGGCTTCTTCATTAATCACCCGCTTAGTACCAGCATCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAGATTTCAACAGATAACAACACCAAGGTTCTATGGGGTGTTCTTTCAACAATACCTTTCCTATACATTCTTTACGTATTGTTCGTTGAGCTTTCAAAGTCTCTAGATCGTCAACCAGCAGGAGTTGCAGCAACCATTGGTCGCTTGCGCTTGCTTTTGATCGCAACATGGGGCGTCTACCCGATGGTC YVDWILTVPLLLVEVVAVLALAKAAASSLITRLVPASAAMIALGYPGEISTDNNTKVLWGVLSTIPFLYILYVLFVELSKSLDRQPAGVAATIGRLRLLLIATWGVYPMV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTTGATTGG------------------------ATCCTTACAGTACCTCTTCTTCTAGTAGAGGTAGTAGCAGTATTAGCTCTT---------GCT---AAGGCAGCGGCTTCT---TCATTA------------------------------------ATCACCCGC---TTAGTACCAGCATCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCA---ACAGAT---------AAC---------------------------AACACCAAG------------------GTTCTATGG---GGTGTTCTTTCAACAATACCTTTCCTATACATTCTTTACGTATTG---------------TTC------GTT---GAGCTTTCAAAGTCTCTAGATCGTCAA---------------CCAGCAGGAGTT---GCA---GCA---ACC---ATT---GGT---CGCTTG---CGCTTGCTTTTGATCGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCGATGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------ILTVPLLLVEVVAVLAL---A-KAAAS-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-TD---N---------NTK------VLW-GVLSTIPFLYILYVL-----F--V-ELSKSLDRQ-----PAGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVYPMV------------------------------------------------------------------------------------------------ [Actinorhodopsin]_KC601740 [Actinorhodopsin] clone_27-7_KC601740 gi|523706474|gb|KC601740| Uncultured bacterium clone 27-7 actinorhodopsin gene, partial cds. Uncultured bacterium clone 27-7 actinorhodopsin gene, partial cds. KC601740 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 oligo-mesotrophic deep submontane freshwater lake other freshwater 47.82 13.38 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGGTATGTTGACTGGATTCTTACAGTACCTCTTCTTCTAGTTGAGGTAGTAGCGGTATTAGCTCTTGCTAAGGCAGCGGCTTCTTCATTAATCACCCGCTTAGTACCAGCATCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAGATTTCAACAGATAACAACACCAAGGTTCTATGGGGTGTTCTTTCAACAATACCTTTCCTATACATTCTTTACGTATTATTCGTTGAGCTTTCAAAGTCTCTAGATCGTCAACCAGCAGGAGTTGCAGCAACCATTGGTCGCTTGCGCTTGCTTTTGATCGCAACATGGGGCGTATATCCCAT RYVDWILTVPLLLVEVVAVLALAKAAASSLITRLVPASAAMIALGYPGEISTDNNTKVLWGVLSTIPFLYILYVLFVELSKSLDRQPAGVAATIGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTATGTTGACTGG------------------------ATTCTTACAGTACCTCTTCTTCTAGTTGAGGTAGTAGCGGTATTAGCTCTT---------GCT---AAGGCAGCGGCTTCT---TCATTA------------------------------------ATCACCCGC---TTAGTACCAGCATCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCA---ACAGAT---------AAC---------------------------AACACCAAG------------------GTTCTATGG---GGTGTTCTTTCAACAATACCTTTCCTATACATTCTTTACGTATTA---------------TTC------GTT---GAGCTTTCAAAGTCTCTAGATCGTCAA---------------CCAGCAGGAGTT---GCA---GCA---ACC---ATT---GGT---CGCTTG---CGCTTGCTTTTGATCGCA---------------------------------------------------------------ACATGG---------GGCGTATATCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------ILTVPLLLVEVVAVLAL---A-KAAAS-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-TD---N---------NTK------VLW-GVLSTIPFLYILYVL-----F--V-ELSKSLDRQ-----PAGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601743 [Actinorhodopsin] clone_28-2_KC601743 gi|523706480|gb|KC601743| Uncultured bacterium clone 28-2 actinorhodopsin gene, partial cds. Uncultured bacterium clone 28-2 actinorhodopsin gene, partial cds. KC601743 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 oligo-mesotrophic deep submontane freshwater lake other freshwater 47.82 13.38 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGGTATGTTGACTGGATTCTTACAGTACCTCTTCTTCTAGTTGAGGTAGTAGCGGTATTAGCTCTTGCTAAGGCAGCGGCTTCTTCATTAATCACCCGCTTAGTACCAGCATCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAGATTTCAACAGATAACAACACCAAGGTTCTATGGGGTGTTCTTTCAACAATACCTTTCCTATACATTCTTTACGTATTATTCGTTGAGCTTTCAAAGTCTCTAGATCGTCAACCAGCAGGAGTTGCAGCAACCATTGGTCGCTTGCGCTTGCTTTTGATCGCAACATGGGGCGTATATCCCAT RYVDWILTVPLLLVEVVAVLALAKAAASSLITRLVPASAAMIALGYPGEISTDNNTKVLWGVLSTIPFLYILYVLFVELSKSLDRQPAGVAATIGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTATGTTGACTGG------------------------ATTCTTACAGTACCTCTTCTTCTAGTTGAGGTAGTAGCGGTATTAGCTCTT---------GCT---AAGGCAGCGGCTTCT---TCATTA------------------------------------ATCACCCGC---TTAGTACCAGCATCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCA---ACAGAT---------AAC---------------------------AACACCAAG------------------GTTCTATGG---GGTGTTCTTTCAACAATACCTTTCCTATACATTCTTTACGTATTA---------------TTC------GTT---GAGCTTTCAAAGTCTCTAGATCGTCAA---------------CCAGCAGGAGTT---GCA---GCA---ACC---ATT---GGT---CGCTTG---CGCTTGCTTTTGATCGCA---------------------------------------------------------------ACATGG---------GGCGTATATCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------ILTVPLLLVEVVAVLAL---A-KAAAS-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-TD---N---------NTK------VLW-GVLSTIPFLYILYVL-----F--V-ELSKSLDRQ-----PAGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601726 [Actinorhodopsin] clone_25-4_KC601726 gi|523706446|gb|KC601726| Uncultured bacterium clone 25-4 actinorhodopsin gene, partial cds. Uncultured bacterium clone 25-4 actinorhodopsin gene, partial cds. KC601726 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 oligo-mesotrophic deep submontane freshwater lake other freshwater 47.82 13.38 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGTTATGTGGACTGGATTCTTACAGTACCTCTTCTTCTAGTTGAGGTAGTAGCAGTATTAGCACTTGCTAAGGCAGCGGCTTCTTCATTAATCACCCGCTTAGTACCAGCATCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAGATTTCAACAGATAACAACACCAAGGTTCTATGGGGTGTTCTTTCAACAATACCTTTCCTATACATTCTCTACGTATTATTCGTTGAGCTTTCAAAGTCTCTAGATCGTCAACCAGCAGGAGTTGCAGCAACCATTGGTCGCTTGCGCTTGCTTTTGATCGCAACATGGGGCGTCTACCCTAT RYVDWILTVPLLLVEVVAVLALAKAAASSLITRLVPASAAMIALGYPGEISTDNNTKVLWGVLSTIPFLYILYVLFVELSKSLDRQPAGVAATIGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTATGTGGACTGG------------------------ATTCTTACAGTACCTCTTCTTCTAGTTGAGGTAGTAGCAGTATTAGCACTT---------GCT---AAGGCAGCGGCTTCT---TCATTA------------------------------------ATCACCCGC---TTAGTACCAGCATCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCA---ACAGAT---------AAC---------------------------AACACCAAG------------------GTTCTATGG---GGTGTTCTTTCAACAATACCTTTCCTATACATTCTCTACGTATTA---------------TTC------GTT---GAGCTTTCAAAGTCTCTAGATCGTCAA---------------CCAGCAGGAGTT---GCA---GCA---ACC---ATT---GGT---CGCTTG---CGCTTGCTTTTGATCGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------ILTVPLLLVEVVAVLAL---A-KAAAS-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-TD---N---------NTK------VLW-GVLSTIPFLYILYVL-----F--V-ELSKSLDRQ-----PAGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HE646852 [Actinorhodopsin] clone_QiwNWEx5_HE646852 gi|363805870|gb|HE646852| Uncultured bacterium partial actR gene for Actinorhodopsin, clone QiwNWEx5. Uncultured bacterium partial actR gene for Actinorhodopsin, clone QiwNWEx5. HE646852 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 19-nov-12 2010 Lake Stechlin surface water other freshwater 53.17 13.03 Environmental actinorhodopsin expression revealed by a new in situ filtration and fixation sampler Wurzbacher,C., Salka,I. and Grossart,H.P. Environ Microbiol Rep 4 (5), 491-497 (2012) 23760893 acI-like TACCGTTATGCTGACTGGATTCTTACAGTACCTCTTCTTCTAGTTGAGGTAGTAGCAGTATTAGCTCTTGCTAAGGCAGCGGCTTCTTCATTAATCACCCGCTTAGTACCAGCATCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAGATTTCAACAGATAACAACACCAAGGTTCTATGGGGTGTTCTTTCAACAATACCTTTCCTATACATTCTTTACGTATTGTTCGTTGAGCTTTCAAAGTCTCTAGATCGTCAACCAGCAGGAGTTGCAGCAACCATTGGTCGCTTGCGCTTGCTTTTGATCGCAACATGGGGCGTGTACCCGATA YRYADWILTVPLLLVEVVAVLALAKAAASSLITRLVPASAAMIALGYPGEISTDNNTKVLWGVLSTIPFLYILYVLFVELSKSLDRQPAGVAATIGRLRLLLIATWGVYPI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCGTTATGCTGACTGG------------------------ATTCTTACAGTACCTCTTCTTCTAGTTGAGGTAGTAGCAGTATTAGCTCTT---------GCT---AAGGCAGCGGCTTCT---TCATTA------------------------------------ATCACCCGC---TTAGTACCAGCATCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCA---ACAGAT---------AAC---------------------------AACACCAAG------------------GTTCTATGG---GGTGTTCTTTCAACAATACCTTTCCTATACATTCTTTACGTATTG---------------TTC------GTT---GAGCTTTCAAAGTCTCTAGATCGTCAA---------------CCAGCAGGAGTT---GCA---GCA---ACC---ATT---GGT---CGCTTG---CGCTTGCTTTTGATCGCA---------------------------------------------------------------ACATGG---------GGCGTGTACCCGATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYADW--------ILTVPLLLVEVVAVLAL---A-KAAAS-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-TD---N---------NTK------VLW-GVLSTIPFLYILYVL-----F--V-ELSKSLDRQ-----PAGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVYPI------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663793 [Actinorhodopsin] SCGC_AAA044A21_Actinobacteria_HQ663793 gi|325163184|gb|HQ663793| Actinobacterium SCGC AAA044A21 rhodopsin gene, partial cds Actinobacterium SCGC AAA044A21 rhodopsin gene, partial cds HQ663793 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938507 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTTGATTGGATTTTAACTGTACCTCTTCTATTAGTTGAAGTAATTGCAGTGCTAGGTCTTGCTAAGGCAGCTTCATCTTCATTGATCAGCCGCTTAGTACCAGCATCTGCTGCGATGATCGCACTTGGTTACCCAGGTGAGATTTCAAATGTTAACAACACCAAAGTACTTTACGGTGTTCTTTCAACAATTCCTTTCCTATACATTCTTTACGTATTATTTGTTGAGCTTTCAAAGTCCCTAGATCGTCAACCAGAAGGTGTTGCAGCAACCGTTGGTCGCTTGCGCTTACTGTTGATCGCAACTTGGGGCGTCTACCCAATGGTCATA YVDWILTVPLLLVEVIAVLGLAKAASSSLISRLVPASAAMIALGYPGEISNVNNTKVLYGVLSTIPFLYILYVLFVELSKSLDRQPEGVAATVGRLRLLLIATWGVYPMVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTTGATTGG------------------------ATTTTAACTGTACCTCTTCTATTAGTTGAAGTAATTGCAGTGCTAGGTCTT---------GCT---AAGGCAGCTTCATCT---TCATTG------------------------------------ATCAGCCGC---TTAGTACCAGCATCTGCTGCGATGATCGCACTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCA---AATGTT---------AAC---------------------------AACACCAAA------------------GTACTTTAC---GGTGTTCTTTCAACAATTCCTTTCCTATACATTCTTTACGTATTA---------------TTT------GTT---GAGCTTTCAAAGTCCCTAGATCGTCAA---------------CCAGAAGGTGTT---GCA---GCA---ACC---GTT---GGT---CGCTTG---CGCTTACTGTTGATCGCA---------------------------------------------------------------ACTTGG---------GGCGTCTACCCAATGGTCATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------ILTVPLLLVEVIAVLGL---A-KAASS-SL------------ISR-LVPASAAMIALGYPGE---I--------------------------S-NV---N---------NTK------VLY-GVLSTIPFLYILYVL-----F--V-ELSKSLDRQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYPMVI----------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663820 [Actinorhodopsin] SCGC_AAA278I18_Actinobacteria_HQ663820 gi|325163237|gb|HQ663820| Actinobacterium SCGC AAA278I18 rhodopsin gene, partial cds Actinobacterium SCGC AAA278I18 rhodopsin gene, partial cds HQ663820 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938557 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTAGATTGGATTTTAACTGTACCTCTTCTATTAGTTGAAGTAATTGCAGTGCTAGGTCTTGCTAAGGCAGCTTCATCTTCATTGATCAGCCGCTTAGTACCAGCATCTGCTGCGATGATCGCACTTGGTTACCCAGGTGAGATTTCAAATGTTAACAACACCAAAGTACTTTACGGTGTTCTTTCAACAATTCCTTTCCTATACATTCTTTACGTATTATTTGTTGAGCTTTCAAAGTCCCTAGATCGTCAACCAGAAGGTGTTGCAGCAACCGTTGGTCGCTTGCGCTTACTGTTGATCGCAACTTGGGGCGTCTACCCGATGGTC YVDWILTVPLLLVEVIAVLGLAKAASSSLISRLVPASAAMIALGYPGEISNVNNTKVLYGVLSTIPFLYILYVLFVELSKSLDRQPEGVAATVGRLRLLLIATWGVYPMV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTAGATTGG------------------------ATTTTAACTGTACCTCTTCTATTAGTTGAAGTAATTGCAGTGCTAGGTCTT---------GCT---AAGGCAGCTTCATCT---TCATTG------------------------------------ATCAGCCGC---TTAGTACCAGCATCTGCTGCGATGATCGCACTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCA---AATGTT---------AAC---------------------------AACACCAAA------------------GTACTTTAC---GGTGTTCTTTCAACAATTCCTTTCCTATACATTCTTTACGTATTA---------------TTT------GTT---GAGCTTTCAAAGTCCCTAGATCGTCAA---------------CCAGAAGGTGTT---GCA---GCA---ACC---GTT---GGT---CGCTTG---CGCTTACTGTTGATCGCA---------------------------------------------------------------ACTTGG---------GGCGTCTACCCGATGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------ILTVPLLLVEVIAVLGL---A-KAASS-SL------------ISR-LVPASAAMIALGYPGE---I--------------------------S-NV---N---------NTK------VLY-GVLSTIPFLYILYVL-----F--V-ELSKSLDRQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYPMV------------------------------------------------------------------------------------------------ [Actinorhodopsin]_HQ663813 [Actinorhodopsin] SCGC_AAA278B11_Actinobacteria_HQ663813 gi|325163223|gb|HQ663813| Actinobacterium SCGC AAA278B11 rhodopsin gene, partial cds Actinobacterium SCGC AAA278B11 rhodopsin gene, partial cds HQ663813 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938543 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTTGATTGGATTTTAACTGTACCTCTTCTATTAGTTGAAGTAATTGCAGTGCTAGGTCTTGCTAAGGCAGCTTCATCTTCATTGATCAGCCGCTTAGTACCAGCATCTGCTGCGATGATCGCACTTGGTTACCCAGGTGAGATTTCAAATGTTAACAACACCAAAGTACTTTACGGTGTTCTTTCAACAATTCCTTTCCTATACATTCTTTACGTATTATTTGTTGAGCTTTCAAAGTCCCTAGATCGTCAACCAGAAGGTGTTGCAGCAACCGTTGGTCGCTTGCGCTTACTGTTGATCGCAACTTGGGGCGTCTAC YVDWILTVPLLLVEVIAVLGLAKAASSSLISRLVPASAAMIALGYPGEISNVNNTKVLYGVLSTIPFLYILYVLFVELSKSLDRQPEGVAATVGRLRLLLIATWGVY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTTGATTGG------------------------ATTTTAACTGTACCTCTTCTATTAGTTGAAGTAATTGCAGTGCTAGGTCTT---------GCT---AAGGCAGCTTCATCT---TCATTG------------------------------------ATCAGCCGC---TTAGTACCAGCATCTGCTGCGATGATCGCACTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCA---AATGTT---------AAC---------------------------AACACCAAA------------------GTACTTTAC---GGTGTTCTTTCAACAATTCCTTTCCTATACATTCTTTACGTATTA---------------TTT------GTT---GAGCTTTCAAAGTCCCTAGATCGTCAA---------------CCAGAAGGTGTT---GCA---GCA---ACC---GTT---GGT---CGCTTG---CGCTTACTGTTGATCGCA---------------------------------------------------------------ACTTGG---------GGCGTCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------ILTVPLLLVEVIAVLGL---A-KAASS-SL------------ISR-LVPASAAMIALGYPGE---I--------------------------S-NV---N---------NTK------VLY-GVLSTIPFLYILYVL-----F--V-ELSKSLDRQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVY--------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601731 [Actinorhodopsin] clone_26-2_KC601731 gi|523706456|gb|KC601731| Uncultured bacterium clone 26-2 actinorhodopsin gene, partial cds. Uncultured bacterium clone 26-2 actinorhodopsin gene, partial cds. KC601731 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 oligo-mesotrophic deep submontane freshwater lake other freshwater 47.82 13.38 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGCTACGTGGACTGGATTTTAACTGTACCTCTTCTACTAGTTGAGGTAATCGCAGTTCTAGGTCTTGCTAAAGCAGCTGCATCTTCATTGATCAGCCGTTTAGTACCAGCATCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAGATTTCAAATGTTAATAACACCAAAGTACTTTACGGTGTTCTTTCAACAATTCCTTTCCTATACATTCTTTACGTATTATTCGTTGAGCTTTCAAAGTCCCTAGATCGTCAACCAGATGGCGTTGCAGCAACCGTTGGTCGCTTGCGCTTACTGTTGATCGCAACATGGGGCGTCTACCCGAT RYVDWILTVPLLLVEVIAVLGLAKAAASSLISRLVPASAAMIALGYPGEISNVNNTKVLYGVLSTIPFLYILYVLFVELSKSLDRQPDGVAATVGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTACGTGGACTGG------------------------ATTTTAACTGTACCTCTTCTACTAGTTGAGGTAATCGCAGTTCTAGGTCTT---------GCT---AAAGCAGCTGCATCT---TCATTG------------------------------------ATCAGCCGT---TTAGTACCAGCATCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCA---AATGTT---------AAT---------------------------AACACCAAA------------------GTACTTTAC---GGTGTTCTTTCAACAATTCCTTTCCTATACATTCTTTACGTATTA---------------TTC------GTT---GAGCTTTCAAAGTCCCTAGATCGTCAA---------------CCAGATGGCGTT---GCA---GCA---ACC---GTT---GGT---CGCTTG---CGCTTACTGTTGATCGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------ILTVPLLLVEVIAVLGL---A-KAAAS-SL------------ISR-LVPASAAMIALGYPGE---I--------------------------S-NV---N---------NTK------VLY-GVLSTIPFLYILYVL-----F--V-ELSKSLDRQ-----PDGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HE646862 [Actinorhodopsin] clone_QixNWEx5_HE646862 gi|363805890|gb|HE646862| Uncultured bacterium partial actR gene for Actinorhodopsin, clone QixNWEx5. Uncultured bacterium partial actR gene for Actinorhodopsin, clone QixNWEx5. HE646862 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 19-nov-12 2010 Lake Stechlin surface water other freshwater 53.17 13.03 Environmental actinorhodopsin expression revealed by a new in situ filtration and fixation sampler Wurzbacher,C., Salka,I. and Grossart,H.P. Environ Microbiol Rep 4 (5), 491-497 (2012) 23760893 acI-like TATCGTTATGTTGACTGGATTTTAACTGTACCTCTTCTATTAGTTGAGGTAATCGCAGTTCTAGGTCTTGCTAAAGCAGCTGCATCTTCATTGATCAGCCGTTTAGTACCAGCATCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAGATTTCAAATGTTAATAACACCAAAGTACTTTACGGTGTTCTTTCAACAATTCCTTTCCTATACATTCTTTACGTATTATTCGTTGAGCTTTCAAAGTCCTTAGATCGTCAACCAGATGGCGTTGCAGCAACCGTTGGTCGCTTGCGCTTACTGTTGATCGCAACATGGGGCGTCTACCCTATA YRYVDWILTVPLLLVEVIAVLGLAKAAASSLISRLVPASAAMIALGYPGEISNVNNTKVLYGVLSTIPFLYILYVLFVELSKSLDRQPDGVAATVGRLRLLLIATWGVYPI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCGTTATGTTGACTGG------------------------ATTTTAACTGTACCTCTTCTATTAGTTGAGGTAATCGCAGTTCTAGGTCTT---------GCT---AAAGCAGCTGCATCT---TCATTG------------------------------------ATCAGCCGT---TTAGTACCAGCATCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCA---AATGTT---------AAT---------------------------AACACCAAA------------------GTACTTTAC---GGTGTTCTTTCAACAATTCCTTTCCTATACATTCTTTACGTATTA---------------TTC------GTT---GAGCTTTCAAAGTCCTTAGATCGTCAA---------------CCAGATGGCGTT---GCA---GCA---ACC---GTT---GGT---CGCTTG---CGCTTACTGTTGATCGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCTATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYVDW--------ILTVPLLLVEVIAVLGL---A-KAAAS-SL------------ISR-LVPASAAMIALGYPGE---I--------------------------S-NV---N---------NTK------VLY-GVLSTIPFLYILYVL-----F--V-ELSKSLDRQ-----PDGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYPI------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663729 [Actinorhodopsin] SCGC_AAA023F13_Actinobacteria_HQ663729 gi|325163058|gb|HQ663729| Actinobacterium SCGC AAA023F13 rhodopsin gene, partial cds Actinobacterium SCGC AAA023F13 rhodopsin gene, partial cds HQ663729 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938416 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Sparkling other freshwater 46.0095 -89.7006 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTTGATTGGATTTTAACTGTACCTCTTCTACTAGTTGAGGTAATTGCAGTTCTAGGTCTTGCTAAGGCAGCTTCATCTTCATTGATCAGCCGCTTAGTACCAGCATCTGCTGCGATGATCGCACTTGGTTACCCAGGTGAGATTTCAACAGTTAACAACACCAAGGTTATCTTCGGTGTTCTTTCAACAATTCCTTTCCTATACATTCTTTACGTATTATTCGTTGAGCTTTCAAAGTCTCTAGATCGTCAACCAGCAGGCGTTGCAGCAACCGTAGGTCGCTTACGTCTTCTATTGATCGCAACTTGGGGCGTCTACCCGATGGTCATA YVDWILTVPLLLVEVIAVLGLAKAASSSLISRLVPASAAMIALGYPGEISTVNNTKVIFGVLSTIPFLYILYVLFVELSKSLDRQPAGVAATVGRLRLLLIATWGVYPMVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTTGATTGG------------------------ATTTTAACTGTACCTCTTCTACTAGTTGAGGTAATTGCAGTTCTAGGTCTT---------GCT---AAGGCAGCTTCATCT---TCATTG------------------------------------ATCAGCCGC---TTAGTACCAGCATCTGCTGCGATGATCGCACTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCA---ACAGTT---------AAC---------------------------AACACCAAG------------------GTTATCTTC---GGTGTTCTTTCAACAATTCCTTTCCTATACATTCTTTACGTATTA---------------TTC------GTT---GAGCTTTCAAAGTCTCTAGATCGTCAA---------------CCAGCAGGCGTT---GCA---GCA---ACC---GTA---GGT---CGCTTA---CGTCTTCTATTGATCGCA---------------------------------------------------------------ACTTGG---------GGCGTCTACCCGATGGTCATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------ILTVPLLLVEVIAVLGL---A-KAASS-SL------------ISR-LVPASAAMIALGYPGE---I--------------------------S-TV---N---------NTK------VIF-GVLSTIPFLYILYVL-----F--V-ELSKSLDRQ-----PAGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYPMVI----------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663821 [Actinorhodopsin] SCGC_AAA278J07_Actinobacteria_HQ663821 gi|325163239|gb|HQ663821| Actinobacterium SCGC AAA278J07 rhodopsin gene, partial cds Actinobacterium SCGC AAA278J07 rhodopsin gene, partial cds HQ663821 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938559 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTAGATTGGATTTTAACTGTACCTCTACTACTGGTAGAAGTAATTGCAGTTCTAGGTCTTGCTAAGGCAGCTTCATCTTCATTGATCAGCCGCTTAGTACCAGCATCTGCTGCGATGATCGCACTTGGTTACCCAGGTGAGATTTCAACAGTTAACAACACCAAGGTTATCTTCGGTGTGCTTTCAACAATTCCTTTCCTATACATTCTTTACGTATTATTCGTTGAGCTTTCAAAGTCTCTTGATCGTCAACCAGCAGGCGTTGCAGCAACCGTAGGTCGCTTACGTCTTCTATTGATCGCTACATGGGGCGTCTACCCGATG YVDWILTVPLLLVEVIAVLGLAKAASSSLISRLVPASAAMIALGYPGEISTVNNTKVIFGVLSTIPFLYILYVLFVELSKSLDRQPAGVAATVGRLRLLLIATWGVYPM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTAGATTGG------------------------ATTTTAACTGTACCTCTACTACTGGTAGAAGTAATTGCAGTTCTAGGTCTT---------GCT---AAGGCAGCTTCATCT---TCATTG------------------------------------ATCAGCCGC---TTAGTACCAGCATCTGCTGCGATGATCGCACTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCA---ACAGTT---------AAC---------------------------AACACCAAG------------------GTTATCTTC---GGTGTGCTTTCAACAATTCCTTTCCTATACATTCTTTACGTATTA---------------TTC------GTT---GAGCTTTCAAAGTCTCTTGATCGTCAA---------------CCAGCAGGCGTT---GCA---GCA---ACC---GTA---GGT---CGCTTA---CGTCTTCTATTGATCGCT---------------------------------------------------------------ACATGG---------GGCGTCTACCCGATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------ILTVPLLLVEVIAVLGL---A-KAASS-SL------------ISR-LVPASAAMIALGYPGE---I--------------------------S-TV---N---------NTK------VIF-GVLSTIPFLYILYVL-----F--V-ELSKSLDRQ-----PAGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYPM------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663803 [Actinorhodopsin] SCGC_AAA044F03_Actinobacteria_HQ663803 gi|325163203|gb|HQ663803| Actinobacterium SCGC AAA044F03 rhodopsin gene, partial cds Actinobacterium SCGC AAA044F03 rhodopsin gene, partial cds HQ663803 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938522 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTTGATTGGATTTTAACTGTACCTCTTCTACTAGTTGAGGTAATTGCAGTTCTAGGTCTTGCTAAAGCAGCTTCATCTTCATTGATCAGCCGCTTAGTACCAGCATCTGCTGCGATGATCGCACTTGGTTACCCAGGTGAGATTTCTGCAGATAACAACACCAAAGTACTTTGGGGTGTTCTTTCAACTCTTCCTTTCCTATACATTCTTTATGTATTGTTCGTTGAGCTTTCAAAGTCTCTTGATCGTCAACCAGCAGGCGTTGCAGCAACCGTAGGTCGCTTACGTCTTCTTTTGGTTGCAACATGGGGCGTCTACCCGATGGTCATA YVDWILTVPLLLVEVIAVLGLAKAASSSLISRLVPASAAMIALGYPGEISADNNTKVLWGVLSTLPFLYILYVLFVELSKSLDRQPAGVAATVGRLRLLLVATWGVYPMVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTTGATTGG------------------------ATTTTAACTGTACCTCTTCTACTAGTTGAGGTAATTGCAGTTCTAGGTCTT---------GCT---AAAGCAGCTTCATCT---TCATTG------------------------------------ATCAGCCGC---TTAGTACCAGCATCTGCTGCGATGATCGCACTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCT---GCAGAT---------AAC---------------------------AACACCAAA------------------GTACTTTGG---GGTGTTCTTTCAACTCTTCCTTTCCTATACATTCTTTATGTATTG---------------TTC------GTT---GAGCTTTCAAAGTCTCTTGATCGTCAA---------------CCAGCAGGCGTT---GCA---GCA---ACC---GTA---GGT---CGCTTA---CGTCTTCTTTTGGTTGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCGATGGTCATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------ILTVPLLLVEVIAVLGL---A-KAASS-SL------------ISR-LVPASAAMIALGYPGE---I--------------------------S-AD---N---------NTK------VLW-GVLSTLPFLYILYVL-----F--V-ELSKSLDRQ-----PAGV-A-A-T-V-G-RL-RLLLVA---------------------TW---GVYPMVI----------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663824 [Actinorhodopsin] SCGC_AAA278L05_Actinobacteria_HQ663824 gi|325163245|gb|HQ663824| Actinobacterium SCGC AAA278L05 rhodopsin gene, partial cds Actinobacterium SCGC AAA278L05 rhodopsin gene, partial cds HQ663824 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938565 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTTGATTGGATTTTAACTGTACCTCTTCTACTAGTTGAGGTAGTTGCAGTTCTAGGTCTTGCTAAAGCAGCTTCATCTTCATTGATCAGCCGCTTAGTACCAGCATCTGCTGCGATGATCGCACTTGGTTACCCAGGTGAGATTTCTGCAGATAACAACACCAAAGTACTTTGGGGTGTTCTTTCAACTCTTCCTTTCCTATACATTCTTTATGTATTGTTCGTTGAGCTTTCAAAGTCTCTTGATCGTCAACCAGCAGGCGTTGCAGCAACCGTAGGTCGCTTACGTCTTCTTTTGGTTGCAACATGGGGCGTCTACCCGATGGTCATAGCTGTT YVDWILTVPLLLVEVVAVLGLAKAASSSLISRLVPASAAMIALGYPGEISADNNTKVLWGVLSTLPFLYILYVLFVELSKSLDRQPAGVAATVGRLRLLLVATWGVYPMVIAV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTTGATTGG------------------------ATTTTAACTGTACCTCTTCTACTAGTTGAGGTAGTTGCAGTTCTAGGTCTT---------GCT---AAAGCAGCTTCATCT---TCATTG------------------------------------ATCAGCCGC---TTAGTACCAGCATCTGCTGCGATGATCGCACTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCT---GCAGAT---------AAC---------------------------AACACCAAA------------------GTACTTTGG---GGTGTTCTTTCAACTCTTCCTTTCCTATACATTCTTTATGTATTG---------------TTC------GTT---GAGCTTTCAAAGTCTCTTGATCGTCAA---------------CCAGCAGGCGTT---GCA---GCA---ACC---GTA---GGT---CGCTTA---CGTCTTCTTTTGGTTGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCGATGGTCATAGCTGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------ILTVPLLLVEVVAVLGL---A-KAASS-SL------------ISR-LVPASAAMIALGYPGE---I--------------------------S-AD---N---------NTK------VLW-GVLSTLPFLYILYVL-----F--V-ELSKSLDRQ-----PAGV-A-A-T-V-G-RL-RLLLVA---------------------TW---GVYPMVIAV--------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601733 [Actinorhodopsin] clone_26-6_KC601733 gi|523706460|gb|KC601733| Uncultured bacterium clone 26-6 actinorhodopsin gene, partial cds. Uncultured bacterium clone 26-6 actinorhodopsin gene, partial cds. KC601733 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 oligo-mesotrophic deep submontane freshwater lake other freshwater 47.82 13.38 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 AGGTACGTGGATTGGATTTTAACTGTACCTCTTCTACTAGTAGAGGTAATTGCAGTTCTAGGTCTTGCTAAAGCAGCTGCATCATCATTGATCAACCGCTTAGTACCAGCATCTGCTGCGATGATCGCACTTGGTTACCCAGGTGAGATTTCTGCCGATAACAACACCAAGGTAATCTTCGGTGTTCTTTCAACAATTCCTTTCCTATACATTCTTTATGTATTGTTCGTTGAGCTTTCAAAGTCTCTTGATCGTCAACCAGCAGGCGTTGCAGCGACCGTAGGTCGCTTACGTCTTCTATTGGTTGCAACATGGGGCGTCTACCCGAT RYVDWILTVPLLLVEVIAVLGLAKAAASSLINRLVPASAAMIALGYPGEISADNNTKVIFGVLSTIPFLYILYVLFVELSKSLDRQPAGVAATVGRLRLLLVATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACGTGGATTGG------------------------ATTTTAACTGTACCTCTTCTACTAGTAGAGGTAATTGCAGTTCTAGGTCTT---------GCT---AAAGCAGCTGCATCA---TCATTG------------------------------------ATCAACCGC---TTAGTACCAGCATCTGCTGCGATGATCGCACTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCT---GCCGAT---------AAC---------------------------AACACCAAG------------------GTAATCTTC---GGTGTTCTTTCAACAATTCCTTTCCTATACATTCTTTATGTATTG---------------TTC------GTT---GAGCTTTCAAAGTCTCTTGATCGTCAA---------------CCAGCAGGCGTT---GCA---GCG---ACC---GTA---GGT---CGCTTA---CGTCTTCTATTGGTTGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------ILTVPLLLVEVIAVLGL---A-KAAAS-SL------------INR-LVPASAAMIALGYPGE---I--------------------------S-AD---N---------NTK------VIF-GVLSTIPFLYILYVL-----F--V-ELSKSLDRQ-----PAGV-A-A-T-V-G-RL-RLLLVA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663823 [Actinorhodopsin] SCGC_AAA278K11_Actinobacteria_HQ663823 gi|325163243|gb|HQ663823| Actinobacterium SCGC AAA278K11 rhodopsin gene, partial cds Actinobacterium SCGC AAA278K11 rhodopsin gene, partial cds HQ663823 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938563 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTAGATTGGATTTTAACTGTACCTCTTCTACTAGTTGAAGTAGTTGCAGTTCTAGGTCTTGCTAAGGCAGCTTCGTCTTCATTGATCAGCCGCTTAGTACCAGCATCTGCTGCGATGATCGCTCTTGGTTACCCGGGTGAGATTTCATCAGTTAACAACACCAAAGTAATTTGGGGTGTTCTTTCAACAATTCCTTTCCTATACATTCTTTATGTATTGTTCGTTGAGCTTTCAAAGTCTCTTGATCGTCAACCAGCAGGCGTTGCCGCAACCGTTGGTCGCTTACGTCTTCTATTGGTTGCAACATGGGGCGTCTACCCGATGGTCATA YVDWILTVPLLLVEVVAVLGLAKAASSSLISRLVPASAAMIALGYPGEISSVNNTKVIWGVLSTIPFLYILYVLFVELSKSLDRQPAGVAATVGRLRLLLVATWGVYPMVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTAGATTGG------------------------ATTTTAACTGTACCTCTTCTACTAGTTGAAGTAGTTGCAGTTCTAGGTCTT---------GCT---AAGGCAGCTTCGTCT---TCATTG------------------------------------ATCAGCCGC---TTAGTACCAGCATCTGCTGCGATGATCGCTCTTGGTTACCCGGGTGAG---------ATT------------------------------------------------------------------------------TCA---TCAGTT---------AAC---------------------------AACACCAAA------------------GTAATTTGG---GGTGTTCTTTCAACAATTCCTTTCCTATACATTCTTTATGTATTG---------------TTC------GTT---GAGCTTTCAAAGTCTCTTGATCGTCAA---------------CCAGCAGGCGTT---GCC---GCA---ACC---GTT---GGT---CGCTTA---CGTCTTCTATTGGTTGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCGATGGTCATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------ILTVPLLLVEVVAVLGL---A-KAASS-SL------------ISR-LVPASAAMIALGYPGE---I--------------------------S-SV---N---------NTK------VIW-GVLSTIPFLYILYVL-----F--V-ELSKSLDRQ-----PAGV-A-A-T-V-G-RL-RLLLVA---------------------TW---GVYPMVI----------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663840 [Actinorhodopsin] SCGC_AAA280O03_Actinobacteria_HQ663840 gi|325163276|gb|HQ663840| Actinobacterium SCGC AAA280O03 rhodopsin gene, partial cds Actinobacterium SCGC AAA280O03 rhodopsin gene, partial cds HQ663840 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938604 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTAGATTGGATTTTAACTGTACCTCTTCTACTAGTTGAAGTAGTTGCAGTTCTAGGTCTTGCTAAGGCAGCTTCGTCTTCATTGATCAGCCGCTTAGTACCAGCATCTGCTGCGATGATCGCTCTTGGTTACCCGGGTGAGATTTCATCAGTTAACAACACCAAAGTAATTTGGGGTGTTCTTTCAACAATTCCTTTCCTATACATTCTTTATGTATTGTTCGTTGAGCTTTCAAAGTCTCTTGATCGTCAACCAGCAGGCGTTGCCGCAACCGTTGGTCGCTTACGTCTTCTATTGGTTGCAACATGGGGCGTCTACCCGATGGTCATA YVDWILTVPLLLVEVVAVLGLAKAASSSLISRLVPASAAMIALGYPGEISSVNNTKVIWGVLSTIPFLYILYVLFVELSKSLDRQPAGVAATVGRLRLLLVATWGVYPMVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTAGATTGG------------------------ATTTTAACTGTACCTCTTCTACTAGTTGAAGTAGTTGCAGTTCTAGGTCTT---------GCT---AAGGCAGCTTCGTCT---TCATTG------------------------------------ATCAGCCGC---TTAGTACCAGCATCTGCTGCGATGATCGCTCTTGGTTACCCGGGTGAG---------ATT------------------------------------------------------------------------------TCA---TCAGTT---------AAC---------------------------AACACCAAA------------------GTAATTTGG---GGTGTTCTTTCAACAATTCCTTTCCTATACATTCTTTATGTATTG---------------TTC------GTT---GAGCTTTCAAAGTCTCTTGATCGTCAA---------------CCAGCAGGCGTT---GCC---GCA---ACC---GTT---GGT---CGCTTA---CGTCTTCTATTGGTTGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCGATGGTCATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------ILTVPLLLVEVVAVLGL---A-KAASS-SL------------ISR-LVPASAAMIALGYPGE---I--------------------------S-SV---N---------NTK------VIW-GVLSTIPFLYILYVL-----F--V-ELSKSLDRQ-----PAGV-A-A-T-V-G-RL-RLLLVA---------------------TW---GVYPMVI----------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663828 [Actinorhodopsin] SCGC_AAA278N15_Actinobacteria_HQ663828 gi|325163252|gb|HQ663828| Actinobacterium SCGC AAA278N15 rhodopsin gene, partial cds Actinobacterium SCGC AAA278N15 rhodopsin gene, partial cds HQ663828 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938575 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTAGATTGGATTTTAACTGTACCTCTTCTTCTAGTTGAGGTAGTTGCAGTTCTAGCTCTTGCTAAGGCAGCTTCATCTTCACTAATCAGCCGCTTAGTGCCAGCATCTGCAGCAATGATCGCACTTGGTTATCCAGGTGAGATTTCTACAGATAACAACACCAAAGTAATTTGGGGTGTTCTTTCAACTCTACCTTTCCTATACATTCTTTATGTATTGTTCGTTGAGCTTTCAAAGTCCCTAGATCGTCAACCAGCAGGCGTTGCAGCAACTATTGGTCGCTTACGTCTTCTGTTGATCGCAACATGGGGCGTCTAC YVDWILTVPLLLVEVVAVLALAKAASSSLISRLVPASAAMIALGYPGEISTDNNTKVIWGVLSTLPFLYILYVLFVELSKSLDRQPAGVAATIGRLRLLLIATWGVY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTAGATTGG------------------------ATTTTAACTGTACCTCTTCTTCTAGTTGAGGTAGTTGCAGTTCTAGCTCTT---------GCT---AAGGCAGCTTCATCT---TCACTA------------------------------------ATCAGCCGC---TTAGTGCCAGCATCTGCAGCAATGATCGCACTTGGTTATCCAGGTGAG---------ATT------------------------------------------------------------------------------TCT---ACAGAT---------AAC---------------------------AACACCAAA------------------GTAATTTGG---GGTGTTCTTTCAACTCTACCTTTCCTATACATTCTTTATGTATTG---------------TTC------GTT---GAGCTTTCAAAGTCCCTAGATCGTCAA---------------CCAGCAGGCGTT---GCA---GCA---ACT---ATT---GGT---CGCTTA---CGTCTTCTGTTGATCGCA---------------------------------------------------------------ACATGG---------GGCGTCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------ILTVPLLLVEVVAVLAL---A-KAASS-SL------------ISR-LVPASAAMIALGYPGE---I--------------------------S-TD---N---------NTK------VIW-GVLSTLPFLYILYVL-----F--V-ELSKSLDRQ-----PAGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVY--------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663833 [Actinorhodopsin] SCGC_AAA278P07_Actinobacteria_HQ663833 gi|325163262|gb|HQ663833| Actinobacterium SCGC AAA278P07 rhodopsin gene, partial cds Actinobacterium SCGC AAA278P07 rhodopsin gene, partial cds HQ663833 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938583 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTAGATTGGATTTTAACTGTACCTCTTCTTCTAGTTGAGGTAGTTGCAGTTCTAGCTCTTGCTAAGGCAGCTTCATCTTCACTAATCAGCCGCTTAGTGCCAGCATCTGCAGCAATGATCGCACTTGGTTATCCAGGTGAGATTTCTACAGATAACAACACCAAAGTAATTTGGGGTGTTCTTTCAACTCTACCTTTCCTATACATTCTTTATGTATTGTTCGTTGAGCTTTCAAAGTCCCTAGATCGTCAACCAGCAGGCGTTGCAGCAACTATTGGTCGCTTACGTCTTCTGTTGATCGCAACATGGGGCGTCTACCCAATGGTCATAGCTGTT YVDWILTVPLLLVEVVAVLALAKAASSSLISRLVPASAAMIALGYPGEISTDNNTKVIWGVLSTLPFLYILYVLFVELSKSLDRQPAGVAATIGRLRLLLIATWGVYPMVIAV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTAGATTGG------------------------ATTTTAACTGTACCTCTTCTTCTAGTTGAGGTAGTTGCAGTTCTAGCTCTT---------GCT---AAGGCAGCTTCATCT---TCACTA------------------------------------ATCAGCCGC---TTAGTGCCAGCATCTGCAGCAATGATCGCACTTGGTTATCCAGGTGAG---------ATT------------------------------------------------------------------------------TCT---ACAGAT---------AAC---------------------------AACACCAAA------------------GTAATTTGG---GGTGTTCTTTCAACTCTACCTTTCCTATACATTCTTTATGTATTG---------------TTC------GTT---GAGCTTTCAAAGTCCCTAGATCGTCAA---------------CCAGCAGGCGTT---GCA---GCA---ACT---ATT---GGT---CGCTTA---CGTCTTCTGTTGATCGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCAATGGTCATAGCTGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------ILTVPLLLVEVVAVLAL---A-KAASS-SL------------ISR-LVPASAAMIALGYPGE---I--------------------------S-TD---N---------NTK------VIW-GVLSTLPFLYILYVL-----F--V-ELSKSLDRQ-----PAGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVYPMVIAV--------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663746 [Actinorhodopsin] SCGC_AAA027F08_Actinobacteria_HQ663746 gi|325163091|gb|HQ663746| Actinobacterium SCGC AAA027F08 rhodopsin gene, partial cds Actinobacterium SCGC AAA027F08 rhodopsin gene, partial cds HQ663746 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938434 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Mendota other freshwater 46.0095 -89.7006 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTTGATTGGATCCTTACTGTACCTCTTCTACTAGTTGAGGTAGTAGCAGTACTAGCTCTTGCTAAGGCAGCGGCTTCTTCATTGATCAACCGCTTAGTACCAGCTGCAGTTGCAATGATCGCACTTGGTTACCCAGGTGAGATTTCAACTGATAACAACACCAAGATTCTTTGGGGTGTTCTATCAACAATACCTTTCCTATACATTCTGTATGTATTGTTCGTCGAGCTTTCAAAGTCCCTAGATCGTCAGCCAGCTGGCGTAGCTGCAACCATTGGTCGCCTACGTTTGCTTTTGATCGCAACATGGGGCGTCTACCCCATGGTCATA YVDWILTVPLLLVEVVAVLALAKAAASSLINRLVPAAVAMIALGYPGEISTDNNTKILWGVLSTIPFLYILYVLFVELSKSLDRQPAGVAATIGRLRLLLIATWGVYPMVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTTGATTGG------------------------ATCCTTACTGTACCTCTTCTACTAGTTGAGGTAGTAGCAGTACTAGCTCTT---------GCT---AAGGCAGCGGCTTCT---TCATTG------------------------------------ATCAACCGC---TTAGTACCAGCTGCAGTTGCAATGATCGCACTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCA---ACTGAT---------AAC---------------------------AACACCAAG------------------ATTCTTTGG---GGTGTTCTATCAACAATACCTTTCCTATACATTCTGTATGTATTG---------------TTC------GTC---GAGCTTTCAAAGTCCCTAGATCGTCAG---------------CCAGCTGGCGTA---GCT---GCA---ACC---ATT---GGT---CGCCTA---CGTTTGCTTTTGATCGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCCATGGTCATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------ILTVPLLLVEVVAVLAL---A-KAAAS-SL------------INR-LVPAAVAMIALGYPGE---I--------------------------S-TD---N---------NTK------ILW-GVLSTIPFLYILYVL-----F--V-ELSKSLDRQ-----PAGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVYPMVI----------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663747 [Actinorhodopsin] SCGC_AAA027J17_Actinobacteria_HQ663747 gi|325163093|gb|HQ663747| Actinobacterium SCGC AAA027J17 rhodopsin gene, partial cds Actinobacterium SCGC AAA027J17 rhodopsin gene, partial cds HQ663747 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:932040 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Mendota other freshwater 46.0095 -89.7006 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) GATTGGATCCTTACTGTACCTCTTCTACTAGTTGAGGTAGTAGCAGTACTAGCTCTTGCTAAGGCAGCGGCTTCTTCATTGATCAACCGCTTAGTACCAGCTGCAGTTGCAATGATCGCACTTGGTTACCCAGGTGAGATTTCAACTGATAACAACACCAAGATTCTTTGGGGTGTTCTATCAACAATACCTTTCCTATACATTCTGTATGTATTGTTCGTCGAGCTTTCAAAGTCCCTAGATCGTCAGCCAGCTGGCGTAGCTGCAACCATTGGTCGCCTACGTTTGCTTTTGATCGCAACATGGGGCGTCTACCCCATGGTCATA DWILTVPLLLVEVVAVLALAKAAASSLINRLVPAAVAMIALGYPGEISTDNNTKILWGVLSTIPFLYILYVLFVELSKSLDRQPAGVAATIGRLRLLLIATWGVYPMVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTGG------------------------ATCCTTACTGTACCTCTTCTACTAGTTGAGGTAGTAGCAGTACTAGCTCTT---------GCT---AAGGCAGCGGCTTCT---TCATTG------------------------------------ATCAACCGC---TTAGTACCAGCTGCAGTTGCAATGATCGCACTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCA---ACTGAT---------AAC---------------------------AACACCAAG------------------ATTCTTTGG---GGTGTTCTATCAACAATACCTTTCCTATACATTCTGTATGTATTG---------------TTC------GTC---GAGCTTTCAAAGTCCCTAGATCGTCAG---------------CCAGCTGGCGTA---GCT---GCA---ACC---ATT---GGT---CGCCTA---CGTTTGCTTTTGATCGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCCATGGTCATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DW--------ILTVPLLLVEVVAVLAL---A-KAAAS-SL------------INR-LVPAAVAMIALGYPGE---I--------------------------S-TD---N---------NTK------ILW-GVLSTIPFLYILYVL-----F--V-ELSKSLDRQ-----PAGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVYPMVI----------------------------------------------------------------------------------------------- [Actinorhodopsin]_HF571297 [Actinorhodopsin] clone_BSActR_OTU5_HF571297 gi|528066055|gb|HF571297| Uncultured bacterium partial actR gene for Actinorhodopsin, clone BSActR OTU5. Uncultured bacterium partial actR gene for Actinorhodopsin, clone BSActR OTU5. HF571297 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-juil-13 #na brackish water Baltic Sea marine 57.8 20 Distribution of acI-Actinorhodopsin genes in Baltic Sea salinity gradients indicates the success of facultative freshwater photoheterotrophs in brackish waters Salka,I., Wurzbacher,C., Garcia,S.L., Labrenz,M., Juergens,K. and Grossart,H.P. Unpublished #na #na TACCGTTACGCGGACTGGATTCTGACAGTACCTCTTCTACTAGTTGAGGTAGTAGCAGTACTAGCACTTGCTAAGGCGGCAGCTTCTTCATTGATCAACCGCTTAGTACCAGCTGCAGTTGCAATGATCGCACTTGGTTACCCAGGTGAGATTTCAACTGATAACAATACAAAGATTCTTTGGGGTGTTCTATCAACAATACCTTTCCTATACATTCTGTATGTATTGTTCGTCGAGCTTTCAAAGTCCCTAGATCGTCAACCAGCTGGCGTAGCTGCAACCATTGGTCGCCTACGTTTGCTTTTGATCGCAACATGGGGCGTATATCCGATA YRYADWILTVPLLLVEVVAVLALAKAAASSLINRLVPAAVAMIALGYPGEISTDNNTKILWGVLSTIPFLYILYVLFVELSKSLDRQPAGVAATIGRLRLLLIATWGVYPI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCGTTACGCGGACTGG------------------------ATTCTGACAGTACCTCTTCTACTAGTTGAGGTAGTAGCAGTACTAGCACTT---------GCT---AAGGCGGCAGCTTCT---TCATTG------------------------------------ATCAACCGC---TTAGTACCAGCTGCAGTTGCAATGATCGCACTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCA---ACTGAT---------AAC---------------------------AATACAAAG------------------ATTCTTTGG---GGTGTTCTATCAACAATACCTTTCCTATACATTCTGTATGTATTG---------------TTC------GTC---GAGCTTTCAAAGTCCCTAGATCGTCAA---------------CCAGCTGGCGTA---GCT---GCA---ACC---ATT---GGT---CGCCTA---CGTTTGCTTTTGATCGCA---------------------------------------------------------------ACATGG---------GGCGTATATCCGATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYADW--------ILTVPLLLVEVVAVLAL---A-KAAAS-SL------------INR-LVPAAVAMIALGYPGE---I--------------------------S-TD---N---------NTK------ILW-GVLSTIPFLYILYVL-----F--V-ELSKSLDRQ-----PAGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVYPI------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663749 [Actinorhodopsin] SCGC_AAA027M13_Actinobacteria_HQ663749 gi|325163097|gb|HQ663749| Actinobacterium SCGC AAA027M13 rhodopsin gene, partial cds Actinobacterium SCGC AAA027M13 rhodopsin gene, partial cds HQ663749 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938439 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Mendota other freshwater 46.0095 -89.7006 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) ATTCTGACAGTACCTCTACTTCTAGTAGAAGTAATTGCAGTACTTGCTCTTGCTAAGGCAGCGGCTTCCTCATTAATTACCCGCTTAGTGCCTGCATCAGCAGCAATGATCGCACTTGGTTACCCAGGTGAGATTTCAACTGACAACAACACCAAAGTTCTATGGGGTGTATTGTCAACAATACCTTTCCTATACATTCTGTATGTATTGTTCGTCGAGCTTTCAAAGTCTCTAGATCGTCAACCAGCAGGAGTAGCTGCGACTGTAGGTCGTCTACGTTTGCTATTGATCGCAACTTGGGGCATCTACCCGATGGTCATA ILTVPLLLVEVIAVLALAKAAASSLITRLVPASAAMIALGYPGEISTDNNTKVLWGVLSTIPFLYILYVLFVELSKSLDRQPAGVAATVGRLRLLLIATWGIYPMVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTGACAGTACCTCTACTTCTAGTAGAAGTAATTGCAGTACTTGCTCTT---------GCT---AAGGCAGCGGCTTCC---TCATTA------------------------------------ATTACCCGC---TTAGTGCCTGCATCAGCAGCAATGATCGCACTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCA---ACTGAC---------AAC---------------------------AACACCAAA------------------GTTCTATGG---GGTGTATTGTCAACAATACCTTTCCTATACATTCTGTATGTATTG---------------TTC------GTC---GAGCTTTCAAAGTCTCTAGATCGTCAA---------------CCAGCAGGAGTA---GCT---GCG---ACT---GTA---GGT---CGTCTA---CGTTTGCTATTGATCGCA---------------------------------------------------------------ACTTGG---------GGCATCTACCCGATGGTCATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLLLVEVIAVLAL---A-KAAAS-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-TD---N---------NTK------VLW-GVLSTIPFLYILYVL-----F--V-ELSKSLDRQ-----PAGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GIYPMVI----------------------------------------------------------------------------------------------- [Actinorhodopsin]_HF571306 [Actinorhodopsin] clone_BSActR_OTU15_HF571306 gi|528066073|gb|HF571306| Uncultured bacterium partial actR gene for Actinorhodopsin, clone BSActR OTU15. Uncultured bacterium partial actR gene for Actinorhodopsin, clone BSActR OTU15. HF571306 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; na light-energy conversion (ion transport) unknown [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-juil-13 #na brackish water Baltic Sea marine 57.8 20 Distribution of acI-Actinorhodopsin genes in Baltic Sea salinity gradients indicates the success of facultative freshwater photoheterotrophs in brackish waters Salka,I., Wurzbacher,C., Garcia,S.L., Labrenz,M., Juergens,K. and Grossart,H.P. Unpublished #na #na GCGGCTTCTTCATTAATTACCCGCTTAGTGCCTGCATCAGCAGCAATGATCGCACTTGGTTACCCAGGTGAGATTTCAACTGACAACAACACCAAGGTTCTATGGGGTGTATTGTCAACAATACCTTTCCTATACATTTTGTATGTATTGTTCGTCGAGCTTTCAAAGTCTCTAGATCGTCAACCAGCAGGAGTAGCTGCGACTGTAGGTCGTCTACGTTTGCTATTGATCGCAACTTGGGGCGTGTATCCTATA AASSLITRLVPASAAMIALGYPGEISTDNNTKVLWGVLSTIPFLYILYVLFVELSKSLDRQPAGVAATVGRLRLLLIATWGVYPI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGGCTTCT---TCATTA------------------------------------ATTACCCGC---TTAGTGCCTGCATCAGCAGCAATGATCGCACTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCA---ACTGAC---------AAC---------------------------AACACCAAG------------------GTTCTATGG---GGTGTATTGTCAACAATACCTTTCCTATACATTTTGTATGTATTG---------------TTC------GTC---GAGCTTTCAAAGTCTCTAGATCGTCAA---------------CCAGCAGGAGTA---GCT---GCG---ACT---GTA---GGT---CGTCTA---CGTTTGCTATTGATCGCA---------------------------------------------------------------ACTTGG---------GGCGTGTATCCTATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAS-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-TD---N---------NTK------VLW-GVLSTIPFLYILYVL-----F--V-ELSKSLDRQ-----PAGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYPI------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HF571313 [Actinorhodopsin] clone_BSsur_ActRdgge16_HF571313 gi|528066087|gb|HF571313| Uncultured bacterium partial actR gene for Actinorhodopsin, clone BSsur ActRdgge16. Uncultured bacterium partial actR gene for Actinorhodopsin, clone BSsur ActRdgge16. HF571313 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-juil-13 #na brackish water Baltic Sea marine 57.8 20 Distribution of acI-Actinorhodopsin genes in Baltic Sea salinity gradients indicates the success of facultative freshwater photoheterotrophs in brackish waters Salka,I., Wurzbacher,C., Garcia,S.L., Labrenz,M., Juergens,K. and Grossart,H.P. Unpublished #na #na TATCGTTATGTGGACTGGATCCTGACAGTACCTCTACTTCTAGTTGAAGTAATTGCAGTACTTGCTCTTGCTAAGGCAGCGGCTTCTTCATTAATCACCCGCTTAGTGCCTGCATCAGCAGCAATGATCGCACTTGGTTACCCAGGTGAGATTTCAACTGACAACAACACCAAGGTTTTATGGGGTGTATTGTCAACAATACCTTTCCTATACATTTTGTATGTATTGTTCGTCGAGCTTTCAAAGTCT YRYVDWILTVPLLLVEVIAVLALAKAAASSLITRLVPASAAMIALGYPGEISTDNNTKVLWGVLSTIPFLYILYVLFVELSKS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCGTTATGTGGACTGG------------------------ATCCTGACAGTACCTCTACTTCTAGTTGAAGTAATTGCAGTACTTGCTCTT---------GCT---AAGGCAGCGGCTTCT---TCATTA------------------------------------ATCACCCGC---TTAGTGCCTGCATCAGCAGCAATGATCGCACTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCA---ACTGAC---------AAC---------------------------AACACCAAG------------------GTTTTATGG---GGTGTATTGTCAACAATACCTTTCCTATACATTTTGTATGTATTG---------------TTC------GTC---GAGCTTTCAAAGTCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYVDW--------ILTVPLLLVEVIAVLAL---A-KAAAS-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-TD---N---------NTK------VLW-GVLSTIPFLYILYVL-----F--V-ELSKS----------------------------------------------------------------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601738 [Actinorhodopsin] clone_27-3_KC601738 gi|523706470|gb|KC601738| Uncultured bacterium clone 27-3 actinorhodopsin gene, partial cds. Uncultured bacterium clone 27-3 actinorhodopsin gene, partial cds. KC601738 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 oligo-mesotrophic deep submontane freshwater lake other freshwater 47.82 13.38 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGATACGTAGACTGGATCCTAACCGTTCCTCTACTACTAGTTGAGGTAGTAGCAGTTCTAGCTCTTGCTAAGGCGGCGGCTTCTTCATTGATTAACCGCTTAGTTCCAGCATCAGCTGCAATGATCGCACTTGGATATCCAGGTGAGATCGCAACTGAGAACAACACCAAAGTTCTTTGGGGTGTTCTTTCAACAATACCTTTCCTATACATCTTGTATGTATTGTTCGTAGAGCTTTCAAAGTCCCTAGATCGTCAACCAGCAGGAGTTGCAGCAACCATCGGTCGCTTGCGCTTGCTATTGATCGCTACTTGGGGCGTCTATCCCAT RYVDWILTVPLLLVEVVAVLALAKAAASSLINRLVPASAAMIALGYPGEIATENNTKVLWGVLSTIPFLYILYVLFVELSKSLDRQPAGVAATIGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACGTAGACTGG------------------------ATCCTAACCGTTCCTCTACTACTAGTTGAGGTAGTAGCAGTTCTAGCTCTT---------GCT---AAGGCGGCGGCTTCT---TCATTG------------------------------------ATTAACCGC---TTAGTTCCAGCATCAGCTGCAATGATCGCACTTGGATATCCAGGTGAG---------ATC------------------------------------------------------------------------------GCA---ACTGAG---------AAC---------------------------AACACCAAA------------------GTTCTTTGG---GGTGTTCTTTCAACAATACCTTTCCTATACATCTTGTATGTATTG---------------TTC------GTA---GAGCTTTCAAAGTCCCTAGATCGTCAA---------------CCAGCAGGAGTT---GCA---GCA---ACC---ATC---GGT---CGCTTG---CGCTTGCTATTGATCGCT---------------------------------------------------------------ACTTGG---------GGCGTCTATCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------ILTVPLLLVEVVAVLAL---A-KAAAS-SL------------INR-LVPASAAMIALGYPGE---I--------------------------A-TE---N---------NTK------VLW-GVLSTIPFLYILYVL-----F--V-ELSKSLDRQ-----PAGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601747 [Actinorhodopsin] clone_8-4_KC601747 gi|523706488|gb|KC601747| Uncultured bacterium clone 8-4 actinorhodopsin gene, partial cds. Uncultured bacterium clone 8-4 actinorhodopsin gene, partial cds. KC601747 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 oligo-mesotrophic deep submontane freshwater lake other freshwater 47.82 13.38 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGGTACGTGGACTGGATCCTAACCGTTCCTCTACTACTAGTTGAGGTAGTAGCAGTTCTAGCTCTTGCTAAGGCGGCGGCTTCTTCATTGATTAACCGCTTAGTTCCAGCATCAGCTGCAATGATCGCACTTGGATATCCAGGTGAGATCGCAACTGAGAACAACACCAAAGTTCTTTGGGGTGTTCTTTCAACAATACCTTTCCTATACATCTTGTATGTATTGTTCGTAGAGCTTTCAAAGTCCCTAGATCGTCAACCAGCAGGAGTTGCAGCAACCATCGGTCGCTTGCGCTTGCTATTGATCGCTACTTGGGGCGTCTATCCCAT RYVDWILTVPLLLVEVVAVLALAKAAASSLINRLVPASAAMIALGYPGEIATENNTKVLWGVLSTIPFLYILYVLFVELSKSLDRQPAGVAATIGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTACGTGGACTGG------------------------ATCCTAACCGTTCCTCTACTACTAGTTGAGGTAGTAGCAGTTCTAGCTCTT---------GCT---AAGGCGGCGGCTTCT---TCATTG------------------------------------ATTAACCGC---TTAGTTCCAGCATCAGCTGCAATGATCGCACTTGGATATCCAGGTGAG---------ATC------------------------------------------------------------------------------GCA---ACTGAG---------AAC---------------------------AACACCAAA------------------GTTCTTTGG---GGTGTTCTTTCAACAATACCTTTCCTATACATCTTGTATGTATTG---------------TTC------GTA---GAGCTTTCAAAGTCCCTAGATCGTCAA---------------CCAGCAGGAGTT---GCA---GCA---ACC---ATC---GGT---CGCTTG---CGCTTGCTATTGATCGCT---------------------------------------------------------------ACTTGG---------GGCGTCTATCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------ILTVPLLLVEVVAVLAL---A-KAAAS-SL------------INR-LVPASAAMIALGYPGE---I--------------------------A-TE---N---------NTK------VLW-GVLSTIPFLYILYVL-----F--V-ELSKSLDRQ-----PAGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601719 [Actinorhodopsin] clone_22-1_KC601719 gi|523706432|gb|KC601719| Uncultured bacterium clone 22-1 actinorhodopsin gene, partial cds. Uncultured bacterium clone 22-1 actinorhodopsin gene, partial cds. KC601719 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 oligo-mesotrophic deep submontane freshwater lake other freshwater 47.82 13.38 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGGTATGTGGACTGGATCCTAACCGTTCCTCTACTACTAGTTGAGGTAGTAGCAGTTCTAGCTCTTGCTAAGGCGGCGGCTTCTTCATTGATTAACCGCTTAGTTCCAGCATCAGCTGCAATGATCGCACTTGGATATCCAGGTGAGATCGCAACTGAGAACAACACCAAAGTTCTTTGGGGTGTTCTTTCAACAATACCTTTCCTATACATCTTGTATGTATTGTTCGTAGAGCTTTCAAAGTCCCTAGATCGTCAACCAGCAGGAGTTGCAGCAACCATCGGTCGCTTGCGCTTGCTATTGATCGCTACTTGGGGCGTCTACCCGAT RYVDWILTVPLLLVEVVAVLALAKAAASSLINRLVPASAAMIALGYPGEIATENNTKVLWGVLSTIPFLYILYVLFVELSKSLDRQPAGVAATIGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTATGTGGACTGG------------------------ATCCTAACCGTTCCTCTACTACTAGTTGAGGTAGTAGCAGTTCTAGCTCTT---------GCT---AAGGCGGCGGCTTCT---TCATTG------------------------------------ATTAACCGC---TTAGTTCCAGCATCAGCTGCAATGATCGCACTTGGATATCCAGGTGAG---------ATC------------------------------------------------------------------------------GCA---ACTGAG---------AAC---------------------------AACACCAAA------------------GTTCTTTGG---GGTGTTCTTTCAACAATACCTTTCCTATACATCTTGTATGTATTG---------------TTC------GTA---GAGCTTTCAAAGTCCCTAGATCGTCAA---------------CCAGCAGGAGTT---GCA---GCA---ACC---ATC---GGT---CGCTTG---CGCTTGCTATTGATCGCT---------------------------------------------------------------ACTTGG---------GGCGTCTACCCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------ILTVPLLLVEVVAVLAL---A-KAAAS-SL------------INR-LVPASAAMIALGYPGE---I--------------------------A-TE---N---------NTK------VLW-GVLSTIPFLYILYVL-----F--V-ELSKSLDRQ-----PAGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601721 [Actinorhodopsin] clone_22-4_KC601721 gi|523706436|gb|KC601721| Uncultured bacterium clone 22-4 actinorhodopsin gene, partial cds. Uncultured bacterium clone 22-4 actinorhodopsin gene, partial cds. KC601721 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 oligo-mesotrophic deep submontane freshwater lake other freshwater 47.82 13.38 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGGTATGTGGACTGGATCCTAACCGTTCCTCTACTACTAGTTGAGGTAGTAGCAGTTCTAGCTCTTGCTAAGGCGGCGGCTTCTTCATTGATTAACCGCTTAGTTCCAGCATCAGCTGCAGTGATCGCACTTGGATATCCAGGTGAGATCGCAACTGAGAACAACACCAAAGTTCTTTGGGGTGTTCTTTCAACAATACCTTTCCTATACATCTTGTATGTATTGTTCGTAGAGCTTTCAAAGTCCCTAGATCGTCAACCAGCAGGAGTTGCAGCAACCATCGGTCGCTTGCGCTTGCTATTGATCGCTACTTGGGGCGTCTATCCTAT RYVDWILTVPLLLVEVVAVLALAKAAASSLINRLVPASAAVIALGYPGEIATENNTKVLWGVLSTIPFLYILYVLFVELSKSLDRQPAGVAATIGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTATGTGGACTGG------------------------ATCCTAACCGTTCCTCTACTACTAGTTGAGGTAGTAGCAGTTCTAGCTCTT---------GCT---AAGGCGGCGGCTTCT---TCATTG------------------------------------ATTAACCGC---TTAGTTCCAGCATCAGCTGCAGTGATCGCACTTGGATATCCAGGTGAG---------ATC------------------------------------------------------------------------------GCA---ACTGAG---------AAC---------------------------AACACCAAA------------------GTTCTTTGG---GGTGTTCTTTCAACAATACCTTTCCTATACATCTTGTATGTATTG---------------TTC------GTA---GAGCTTTCAAAGTCCCTAGATCGTCAA---------------CCAGCAGGAGTT---GCA---GCA---ACC---ATC---GGT---CGCTTG---CGCTTGCTATTGATCGCT---------------------------------------------------------------ACTTGG---------GGCGTCTATCCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------ILTVPLLLVEVVAVLAL---A-KAAAS-SL------------INR-LVPASAAVIALGYPGE---I--------------------------A-TE---N---------NTK------VLW-GVLSTIPFLYILYVL-----F--V-ELSKSLDRQ-----PAGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HE646816 [Actinorhodopsin] clone_QitNWExp_HE646816 gi|363805798|gb|HE646816| Uncultured bacterium partial actR gene for Actinorhodopsin, clone QitNWExp. Uncultured bacterium partial actR gene for Actinorhodopsin, clone QitNWExp. HE646816 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 19-nov-12 2010 Lake Stechlin surface water other freshwater 53.17 13.03 Environmental actinorhodopsin expression revealed by a new in situ filtration and fixation sampler Wurzbacher,C., Salka,I. and Grossart,H.P. Environ Microbiol Rep 4 (5), 491-497 (2012) 23760893 acI-like TACCGGTATGTGGACTGGATTCTAACCGTACCTCTACTACTTGTTGAGGTAGTAGCAGTTCTAGCTCTTGCTAAGGCAGCGGCTTCTTCATTGATTAACCGCTTAGTTCCAGCATCAGCTGCAATGGTCGCACTTGGATATCCAGGTGAGATCTCAACTGACAACAACACCAAAGTTCTTTGGGGTGTTCTTTCAACAATACCTTTCCTATACATCTTGTATGTATTGTTCGTAGAGCTTTCAAAATCCCTAGATCGTCAACCAGCAGGAGTTGCAGCAACCATTGGTCGCTTGCGCTTACTGTTGATTGCAACTTGGGGTGTCTATCCTATA YRYVDWILTVPLLLVEVVAVLALAKAAASSLINRLVPASAAMVALGYPGEISTDNNTKVLWGVLSTIPFLYILYVLFVELSKSLDRQPAGVAATIGRLRLLLIATWGVYPI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCGGTATGTGGACTGG------------------------ATTCTAACCGTACCTCTACTACTTGTTGAGGTAGTAGCAGTTCTAGCTCTT---------GCT---AAGGCAGCGGCTTCT---TCATTG------------------------------------ATTAACCGC---TTAGTTCCAGCATCAGCTGCAATGGTCGCACTTGGATATCCAGGTGAG---------ATC------------------------------------------------------------------------------TCA---ACTGAC---------AAC---------------------------AACACCAAA------------------GTTCTTTGG---GGTGTTCTTTCAACAATACCTTTCCTATACATCTTGTATGTATTG---------------TTC------GTA---GAGCTTTCAAAATCCCTAGATCGTCAA---------------CCAGCAGGAGTT---GCA---GCA---ACC---ATT---GGT---CGCTTG---CGCTTACTGTTGATTGCA---------------------------------------------------------------ACTTGG---------GGTGTCTATCCTATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYVDW--------ILTVPLLLVEVVAVLAL---A-KAAAS-SL------------INR-LVPASAAMVALGYPGE---I--------------------------S-TD---N---------NTK------VLW-GVLSTIPFLYILYVL-----F--V-ELSKSLDRQ-----PAGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVYPI------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601754 [Actinorhodopsin] clone_9-7_KC601754 gi|523706502|gb|KC601754| Uncultured bacterium clone 9-7 actinorhodopsin gene, partial cds. Uncultured bacterium clone 9-7 actinorhodopsin gene, partial cds. KC601754 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 oligo-mesotrophic deep submontane freshwater lake other freshwater 47.82 13.38 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGATATGTGGACTGGATCCTAACCGTTCCTCTACTACTAGTTGAGGTAGTAGCAGTTCTAGCTCTTGCTAAGGCGGCGGCTTCTTCATTGATTAACCGCTTAGTTCCAGCATCAGCTGCAATGATCGCACTTGGATATCCAGGTGAGATCGCAACTGAGAACAACACCAAAGTTCTTTGGGGTGTCCTTTCAACAATACCTTTCCTATACATCTTGTATGTATTGTTCGTAGAGCTTTCAAAGTCCCTTGATCGTCAGCCAGAGGGAGTAGCGGCAACAATTGGTCGCCTACGTCTTCTACTGATCGCAACATGGGGCGTTTACCCTAT RYVDWILTVPLLLVEVVAVLALAKAAASSLINRLVPASAAMIALGYPGEIATENNTKVLWGVLSTIPFLYILYVLFVELSKSLDRQPEGVAATIGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATATGTGGACTGG------------------------ATCCTAACCGTTCCTCTACTACTAGTTGAGGTAGTAGCAGTTCTAGCTCTT---------GCT---AAGGCGGCGGCTTCT---TCATTG------------------------------------ATTAACCGC---TTAGTTCCAGCATCAGCTGCAATGATCGCACTTGGATATCCAGGTGAG---------ATC------------------------------------------------------------------------------GCA---ACTGAG---------AAC---------------------------AACACCAAA------------------GTTCTTTGG---GGTGTCCTTTCAACAATACCTTTCCTATACATCTTGTATGTATTG---------------TTC------GTA---GAGCTTTCAAAGTCCCTTGATCGTCAG---------------CCAGAGGGAGTA---GCG---GCA---ACA---ATT---GGT---CGCCTA---CGTCTTCTACTGATCGCA---------------------------------------------------------------ACATGG---------GGCGTTTACCCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------ILTVPLLLVEVVAVLAL---A-KAAAS-SL------------INR-LVPASAAMIALGYPGE---I--------------------------A-TE---N---------NTK------VLW-GVLSTIPFLYILYVL-----F--V-ELSKSLDRQ-----PEGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663748 [Actinorhodopsin] SCGC_AAA027L06_Actinobacteria_HQ663748 gi|325163095|gb|HQ663748| Actinobacterium SCGC AAA027L06 rhodopsin gene, partial cds Actinobacterium SCGC AAA027L06 rhodopsin gene, partial cds HQ663748 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:913338 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Mendota other freshwater 46.0095 -89.7006 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTTGATTGGATCCTTACAGTTCCTCTACTACTTGTTGAGGTAGTAGCAGTTCTTGCTCTTGCTAAGGCAGCGGCTTCTTCATTAATTACCCGCTTAGTTCCAGCATCAGCAGCAATGATCGCACTTGGTTACCCAGGTGAGATTTCAACTGACAATAACACCAAGGTTCTTTGGGGTGTACTTTCAACAATACCTTTCCTATACATCTTGTATGTATTGTTCGTAGAGCTTTCAAAGTCACTAGATCGTCAACCAGCAGGAGTAGCAGCAACTGTAGGTCGCTTGCGCTTACTTCTGATTGCAACATGGGGCGTCTACCCGATGGTCATA YVDWILTVPLLLVEVVAVLALAKAAASSLITRLVPASAAMIALGYPGEISTDNNTKVLWGVLSTIPFLYILYVLFVELSKSLDRQPAGVAATVGRLRLLLIATWGVYPMVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTTGATTGG------------------------ATCCTTACAGTTCCTCTACTACTTGTTGAGGTAGTAGCAGTTCTTGCTCTT---------GCT---AAGGCAGCGGCTTCT---TCATTA------------------------------------ATTACCCGC---TTAGTTCCAGCATCAGCAGCAATGATCGCACTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCA---ACTGAC---------AAT---------------------------AACACCAAG------------------GTTCTTTGG---GGTGTACTTTCAACAATACCTTTCCTATACATCTTGTATGTATTG---------------TTC------GTA---GAGCTTTCAAAGTCACTAGATCGTCAA---------------CCAGCAGGAGTA---GCA---GCA---ACT---GTA---GGT---CGCTTG---CGCTTACTTCTGATTGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCGATGGTCATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------ILTVPLLLVEVVAVLAL---A-KAAAS-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-TD---N---------NTK------VLW-GVLSTIPFLYILYVL-----F--V-ELSKSLDRQ-----PAGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYPMVI----------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663769 [Actinorhodopsin] SCGC_AAA028N08_Actinobacteria_HQ663769 gi|325163137|gb|HQ663769| Actinobacterium SCGC AAA028N08 rhodopsin gene, partial cds Actinobacterium SCGC AAA028N08 rhodopsin gene, partial cds HQ663769 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938465 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Mendota other freshwater 46.0095 -89.7006 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTAGATTGGATCCTTACAGTTCCTCTACTACTTGTTGAGGTAGTAGCAGTTCTTGCTCTTGCTAAGGCAGCGGCTTCTTCATTAATTACCCGCTTAGTTCCAGCATCAGCAGCAATGATCGCACTTGGTTACCCAGGTGAGATTTCAACTGACAATAACACCAAGGTTCTTTGGGGTGTACTTTCAACAATACCTTTCCTATACATCTTGTATGTATTGTTCGTAGAGCTTTCAAAGTCACTAGATCGTCAACCAGCAGGAGTAGCAGCAACTGTAGGTCGCTTGCGCTTACTTCTGATTGCAACATGGGGCGTCTACCCTATGGTCATA YVDWILTVPLLLVEVVAVLALAKAAASSLITRLVPASAAMIALGYPGEISTDNNTKVLWGVLSTIPFLYILYVLFVELSKSLDRQPAGVAATVGRLRLLLIATWGVYPMVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTAGATTGG------------------------ATCCTTACAGTTCCTCTACTACTTGTTGAGGTAGTAGCAGTTCTTGCTCTT---------GCT---AAGGCAGCGGCTTCT---TCATTA------------------------------------ATTACCCGC---TTAGTTCCAGCATCAGCAGCAATGATCGCACTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCA---ACTGAC---------AAT---------------------------AACACCAAG------------------GTTCTTTGG---GGTGTACTTTCAACAATACCTTTCCTATACATCTTGTATGTATTG---------------TTC------GTA---GAGCTTTCAAAGTCACTAGATCGTCAA---------------CCAGCAGGAGTA---GCA---GCA---ACT---GTA---GGT---CGCTTG---CGCTTACTTCTGATTGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCTATGGTCATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------ILTVPLLLVEVVAVLAL---A-KAAAS-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-TD---N---------NTK------VLW-GVLSTIPFLYILYVL-----F--V-ELSKSLDRQ-----PAGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYPMVI----------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663753 [Actinorhodopsin] SCGC_AAA028A04_Actinobacteria_HQ663753 gi|325163105|gb|HQ663753| Actinobacterium SCGC AAA028A04 rhodopsin gene, partial cds Actinobacterium SCGC AAA028A04 rhodopsin gene, partial cds HQ663753 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938441 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Mendota other freshwater 46.0095 -89.7006 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) GATTGGCTATTAACTGTTCCACTACTTCTAGTTGAAGTAATTGCAGTACTCGCTCTTGCAAAGGCTGTAGCGTCTTCATTGATTAATCGCCTTGTACCAGCAGCAGTTGCAATGATCGCACTTGGTTACCCAGGTGAAATTTCAACAGATGACGGCACAAAGATTCTTTGGGGCGTTCTCTCAACAATTCCTTTCCTATACATTCTTTACGTATTGTTCGTTGAGCTTGGTAAGTCACTCGATCGTCAACCAGCAGGAGTTGCAGCGACAGTAGGTCGTCTACGTTGGCTTCTACTTGCGACATGGGGT DWLLTVPLLLVEVIAVLALAKAVASSLINRLVPAAVAMIALGYPGEISTDDGTKILWGVLSTIPFLYILYVLFVELGKSLDRQPAGVAATVGRLRWLLLATWG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTGG------------------------CTATTAACTGTTCCACTACTTCTAGTTGAAGTAATTGCAGTACTCGCTCTT---------GCA---AAGGCTGTAGCGTCT---TCATTG------------------------------------ATTAATCGC---CTTGTACCAGCAGCAGTTGCAATGATCGCACTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---ACAGAT---------GAC---------------------------GGCACAAAG------------------ATTCTTTGG---GGCGTTCTCTCAACAATTCCTTTCCTATACATTCTTTACGTATTG---------------TTC------GTT---GAGCTTGGTAAGTCACTCGATCGTCAA---------------CCAGCAGGAGTT---GCA---GCG---ACA---GTA---GGT---CGTCTA---CGTTGGCTTCTACTTGCG---------------------------------------------------------------ACATGG---------GGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DW--------LLTVPLLLVEVIAVLAL---A-KAVAS-SL------------INR-LVPAAVAMIALGYPGE---I--------------------------S-TD---D---------GTK------ILW-GVLSTIPFLYILYVL-----F--V-ELGKSLDRQ-----PAGV-A-A-T-V-G-RL-RWLLLA---------------------TW---G----------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HF571292 [Actinorhodopsin] clone_BSActR_OTU2_HF571292 gi|528066045|gb|HF571292| Uncultured bacterium partial actR gene for Actinorhodopsin, clone BSActR OTU2. Uncultured bacterium partial actR gene for Actinorhodopsin, clone BSActR OTU2. HF571292 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-juil-13 #na brackish water Baltic Sea marine 57.8 20 Distribution of acI-Actinorhodopsin genes in Baltic Sea salinity gradients indicates the success of facultative freshwater photoheterotrophs in brackish waters Salka,I., Wurzbacher,C., Garcia,S.L., Labrenz,M., Juergens,K. and Grossart,H.P. Unpublished #na #na AGGTACATTGACTGGCTACTAACTGTTCCACTACTTCTAGTTGAAGTTATCGCTGTTCTCGCTCTTGCAAAGGCCGTAGCATCTTCAATGATCAATCGCCTTGTACCAGCAGCAGTTGCGATGATCGCACTTGGTTACCCAGGTGAGATCTCAACAGATGACGGCACAAAGATTCTTTGGGGCGTTCTCTCAACAATTCCTTTCCTATACATTCTTTATGTATTGTTCGTTGAGCTTGGTAAGTCACTCGATCGCCAGCCAGCAGGCGTAGCCGCGACAATTGGTCGTCTACGTTGGCTTCTACTTGCGACATGGGGCGTTTATCCA RYIDWLLTVPLLLVEVIAVLALAKAVASSMINRLVPAAVAMIALGYPGEISTDDGTKILWGVLSTIPFLYILYVLFVELGKSLDRQPAGVAATIGRLRWLLLATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACATTGACTGG------------------------CTACTAACTGTTCCACTACTTCTAGTTGAAGTTATCGCTGTTCTCGCTCTT---------GCA---AAGGCCGTAGCATCT---TCAATG------------------------------------ATCAATCGC---CTTGTACCAGCAGCAGTTGCGATGATCGCACTTGGTTACCCAGGTGAG---------ATC------------------------------------------------------------------------------TCA---ACAGAT---------GAC---------------------------GGCACAAAG------------------ATTCTTTGG---GGCGTTCTCTCAACAATTCCTTTCCTATACATTCTTTATGTATTG---------------TTC------GTT---GAGCTTGGTAAGTCACTCGATCGCCAG---------------CCAGCAGGCGTA---GCC---GCG---ACA---ATT---GGT---CGTCTA---CGTTGGCTTCTACTTGCG---------------------------------------------------------------ACATGG---------GGCGTTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLLVEVIAVLAL---A-KAVAS-SM------------INR-LVPAAVAMIALGYPGE---I--------------------------S-TD---D---------GTK------ILW-GVLSTIPFLYILYVL-----F--V-ELGKSLDRQ-----PAGV-A-A-T-I-G-RL-RWLLLA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663766 [Actinorhodopsin] SCGC_AAA028I23_Actinobacteria_HQ663766 gi|325163131|gb|HQ663766| Actinobacterium SCGC AAA028I23 rhodopsin gene, partial cds Actinobacterium SCGC AAA028I23 rhodopsin gene, partial cds HQ663766 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938459 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Mendota other freshwater 46.0095 -89.7006 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) GATTGGCTATTGACTGTTCCACTACTTCTAGTTGAAGTTATTGCAGTACTCGCTCTTGCAAAGGCAGTTTCTTCTTCATTGATCACTCGCCTTGTACCTGCATCAGCTGCAATGATCGCACTTGGTTACCCAGGTGAAATCTCAACAGATGACGGCACAAAGATTCCTTGGGGCGTTCTCTCAACAATTCCTTTCCTTTACATCCTCTACGTATTGTTCGTTGAGCTTGGTAAGTCACTCGAGCGTCAACCAGCAGGAGTTGCAGCAACAGTAGGTCGTCTACGTTGGCTTCTACTTGCGACATGGGGCGTCTACCCGATGGTC DWLLTVPLLLVEVIAVLALAKAVSSSLITRLVPASAAMIALGYPGEISTDDGTKIPWGVLSTIPFLYILYVLFVELGKSLERQPAGVAATVGRLRWLLLATWGVYPMV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTGG------------------------CTATTGACTGTTCCACTACTTCTAGTTGAAGTTATTGCAGTACTCGCTCTT---------GCA---AAGGCAGTTTCTTCT---TCATTG------------------------------------ATCACTCGC---CTTGTACCTGCATCAGCTGCAATGATCGCACTTGGTTACCCAGGTGAA---------ATC------------------------------------------------------------------------------TCA---ACAGAT---------GAC---------------------------GGCACAAAG------------------ATTCCTTGG---GGCGTTCTCTCAACAATTCCTTTCCTTTACATCCTCTACGTATTG---------------TTC------GTT---GAGCTTGGTAAGTCACTCGAGCGTCAA---------------CCAGCAGGAGTT---GCA---GCA---ACA---GTA---GGT---CGTCTA---CGTTGGCTTCTACTTGCG---------------------------------------------------------------ACATGG---------GGCGTCTACCCGATGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DW--------LLTVPLLLVEVIAVLAL---A-KAVSS-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-TD---D---------GTK------IPW-GVLSTIPFLYILYVL-----F--V-ELGKSLERQ-----PAGV-A-A-T-V-G-RL-RWLLLA---------------------TW---GVYPMV------------------------------------------------------------------------------------------------ [Actinorhodopsin]_FJ545222 [Actinorhodopsin] Actinobacterium_MWH-EgelM2-3_D6_actinorhodopsin_gene_complete_cds_FJ545222 gi|224384115|gb|FJ545222| Actinobacterium MWH-EgelM2-3.D6 putative actinorhodopsin gene, complete cds. Actinobacterium MWH-EgelM2-3.D6 putative actinorhodopsin gene, complete cds. FJ545222 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:598498 genomic DNA strain 20-MAY-2009 #na Lake Egelsee other freshwater 47.257 8.817 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na ATGCTCGAATTAACAGCCAACCAGTGGAATACGATCTATAACGTATTTTCATTTGGTTTGATCTCAATGCTTGCATGCACTGTGTACACACTCGTTTCACAGTCACGTGTATTGCCTAAGTACCGTAACGCCCTTGTTCTTTCATCAATGGTTACATTCATTGCTGGATACCACTACTGGAGAATCTTCAACTCATTCACAGATGCATCAGATGGTTACAAGGTAGCAACAACTGGACCAGAATCATTCAACGAGGGATACCGTTACGTTGACTGGCTACTAACTGTTCCACTACTTCTAGTTGAAGTTATTGCAGTACTAGCTCTTGCAAAGGCAGTTTCTTCATCATTGATCACCCGCCTTGTACCTGCATCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAGATTTCAGCAGATGACGGCACAAAGATTCTTTGGGGCGTTCTCTCAACAATTCCTTTCCTATACATTCTTTACGTATTGTTCGTTGAGCTTGGTAAGTCACTTGAGCGTCAACCAGCAGGTGTAGCAGCAACTGTAGGTCGTCTACGTTGGCTTCTACTTGCAACATGGGGCGTTTACCCAATCTCATACCTATTCCCACTACTGAATATCACTGGAACAGATGCATTCATGTATCGCCAGATTGGTTACACAGTTGCAGACGTACTTGCTAAGTGCGTATTCGGTCTCACAATCTACAAGATTGCGAAGATGAAGTCTGCTGCAGAAGGTATGTCAGAAGACAAGTAA MLELTANQWNTIYNVFSFGLISMLACTVYTLVSQSRVLPKYRNALVLSSMVTFIAGYHYWRIFNSFTDASDGYKVATTGPESFNEGYRYVDWLLTVPLLLVEVIAVLALAKAVSSSLITRLVPASAAMIALGYPGEISADDGTKILWGVLSTIPFLYILYVLFVELGKSLERQPAGVAATVGRLRWLLLATWGVYPISYLFPLLNITGTDAFMYRQIGYTVADVLAKCVFGLTIYKIAKMKSAAEGMSEDK* ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTCGAATTAACAGCCAACCAGTGGAATACGATCTATAACGTATTTTCATTTGGTTTGATCTCAATGCTTGCATGCACTGTGTACACACTCGTTTCACAGTCACGTGTATTGCCTAAGTACCGTAACGCCCTTGTTCTTTCATCAATGGTTACATTCATTGCTGGATACCACTACTGGAGAATCTTCAACTCATTCACAGATGCATCAGATGGTTACAAGGTAGCAACAACTGGA------------------CCAGAATCATTCAACGAGGGATACCGTTACGTTGACTGG------------------------CTACTAACTGTTCCACTACTTCTAGTTGAAGTTATTGCAGTACTAGCTCTT---------GCA---AAGGCAGTTTCTTCA---TCATTG------------------------------------ATCACCCGC---CTTGTACCTGCATCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCA---GCAGAT---------GAC---------------------------GGCACAAAG------------------ATTCTTTGG---GGCGTTCTCTCAACAATTCCTTTCCTATACATTCTTTACGTATTG---------------TTC------GTT---GAGCTTGGTAAGTCACTTGAGCGTCAA---------------CCAGCAGGTGTA---GCA---GCA---ACT---GTA---GGT---CGTCTA---CGTTGGCTTCTACTTGCA---------------------------------------------------------------ACATGG---------GGCGTTTACCCAATCTCATACCTATTCCCACTACTGAATATCACTGGA---ACAGATGCATTCATGTATCGCCAGATTGGTTACACAGTTGCAGACGTACTTGCTAAGTGCGTATTCGGTCTCACAATCTACAAGATTGCGAAGATGAAGTCTGCTGCAGAAGGTATGTCAGAAGACAAG------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------MLELTANQWNTIYNVFSFGLISMLACTVYTLVSQSRVLPKYRNALVLSSMVTFIAGYHYWRIFNSFTDASDGYKVATTG------PESFNEGYRYVDW--------LLTVPLLLVEVIAVLAL---A-KAVSS-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-AD---D---------GTK------ILW-GVLSTIPFLYILYVL-----F--V-ELGKSLERQ-----PAGV-A-A-T-V-G-RL-RWLLLA---------------------TW---GVYPISYLFPLLNITG-TDAFMYRQIGYTVADVLAKCVFGLTIYKIAKMKSAAEGMSEDK------------------------------------------ [Actinorhodopsin]_FJ545191 [Actinorhodopsin] clone_Erie_LGR_F1_rhodopsin_gene_partial_cds_FJ545191 gi|224384057|gb|FJ545191| Uncultured microorganism clone Erie.LGR.F1 putative rhodopsin gene, partial cds. Uncultured microorganism clone Erie.LGR.F1 putative rhodopsin gene, partial cds. FJ545191 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juil-05 Lake Erie other freshwater 41.9461 -81.6461 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na TTAACTGTTCCACTACTTCTAGTTGAAGTTATTGCAGTACTAGCTCTTGCAAAGGCAGTTTCTTCATCATTGATCACCCGCCTTGTACCTGCATCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAGATTTCAGCAGATGACGGCACAAAGATTCTTTGGGGCGTTCTCTCAACAATTCCTTTCCTATACATTCTTTACGTATTGTTCGTTGAGCTTGGTAAGTCACTTGAGCGTCAACCAGCAGGTGTAGCAGCAACTGTAGGTCGTCTACGTTGGCTTCTACTTGCAACA LTVPLLLVEVIAVLALAKAVSSSLITRLVPASAAMIALGYPGEISADDGTKILWGVLSTIPFLYILYVLFVELGKSLERQPAGVAATVGRLRWLLLAT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAACTGTTCCACTACTTCTAGTTGAAGTTATTGCAGTACTAGCTCTT---------GCA---AAGGCAGTTTCTTCA---TCATTG------------------------------------ATCACCCGC---CTTGTACCTGCATCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCA---GCAGAT---------GAC---------------------------GGCACAAAG------------------ATTCTTTGG---GGCGTTCTCTCAACAATTCCTTTCCTATACATTCTTTACGTATTG---------------TTC------GTT---GAGCTTGGTAAGTCACTTGAGCGTCAA---------------CCAGCAGGTGTA---GCA---GCA---ACT---GTA---GGT---CGTCTA---CGTTGGCTTCTACTTGCA---------------------------------------------------------------ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTVPLLLVEVIAVLAL---A-KAVSS-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-AD---D---------GTK------ILW-GVLSTIPFLYILYVL-----F--V-ELGKSLERQ-----PAGV-A-A-T-V-G-RL-RWLLLA---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663755 [Actinorhodopsin] SCGC_AAA028B13_Actinobacteria_HQ663755 gi|325163109|gb|HQ663755| Actinobacterium SCGC AAA028B13 rhodopsin gene, partial cds Actinobacterium SCGC AAA028B13 rhodopsin gene, partial cds HQ663755 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938443 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Mendota other freshwater 46.0095 -89.7006 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTAGATTGGCTACTAACTGTTCCACTACTTCTAGTTGAAGTTATTGCTGTACTCGCTCTTACAAAGGCAGTTTCTTCTTCATTGATCACACGCCTTGTACCTGCATCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAGATTTCAGCAGATGACGGCACAAAGATCCTTTGGGGCGTTCTCTCCACAATTCCTTTCCTATACATTCTCTACGTATTGTTCGTTGAGCTTGGTAAGTCACTTGATCGCCAACCAGCAGGAGTTGCAGCGACTGTAGGTCGTCTACGTTGGCTTCTACTTGCAACATGGGGCGTCTACCCAATGGTCATA YVDWLLTVPLLLVEVIAVLALTKAVSSSLITRLVPASAAMIALGYPGEISADDGTKILWGVLSTIPFLYILYVLFVELGKSLDRQPAGVAATVGRLRWLLLATWGVYPMVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTAGATTGG------------------------CTACTAACTGTTCCACTACTTCTAGTTGAAGTTATTGCTGTACTCGCTCTT---------ACA---AAGGCAGTTTCTTCT---TCATTG------------------------------------ATCACACGC---CTTGTACCTGCATCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCA---GCAGAT---------GAC---------------------------GGCACAAAG------------------ATCCTTTGG---GGCGTTCTCTCCACAATTCCTTTCCTATACATTCTCTACGTATTG---------------TTC------GTT---GAGCTTGGTAAGTCACTTGATCGCCAA---------------CCAGCAGGAGTT---GCA---GCG---ACT---GTA---GGT---CGTCTA---CGTTGGCTTCTACTTGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCAATGGTCATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLLVEVIAVLAL---T-KAVSS-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-AD---D---------GTK------ILW-GVLSTIPFLYILYVL-----F--V-ELGKSLDRQ-----PAGV-A-A-T-V-G-RL-RWLLLA---------------------TW---GVYPMVI----------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663764 [Actinorhodopsin] SCGC_AAA028I10_Actinobacteria_HQ663764 gi|325163127|gb|HQ663764| Actinobacterium SCGC AAA028I10 rhodopsin gene, partial cds Actinobacterium SCGC AAA028I10 rhodopsin gene, partial cds HQ663764 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938456 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Mendota other freshwater 46.0095 -89.7006 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) GTTGATTGGCTACTAACTGTTCCACTACTTCTAGTTGAAGTTATTGCTGTACTCGCTCTTACAAAGGCAGTTTCTTCTTCATTGATCACACGCCTTGTACCTGCATCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAGATTTCAGCAGATGACGGCACAAAGATCCTTTGGGGCGTTCTCTCCACAATTCCTTTCCTATACATTCTCTACGTATTGTTCGTTGAGCTTGGTAAGTCACTTGATCGCCAACCAGCAGGAGTTGCAGCGACTGTAGGTCGTCTACGTTGGCTTCTACTTGCAACATGGGGCGTCTACCCGATGGTC VDWLLTVPLLLVEVIAVLALTKAVSSSLITRLVPASAAMIALGYPGEISADDGTKILWGVLSTIPFLYILYVLFVELGKSLDRQPAGVAATVGRLRWLLLATWGVYPMV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGATTGG------------------------CTACTAACTGTTCCACTACTTCTAGTTGAAGTTATTGCTGTACTCGCTCTT---------ACA---AAGGCAGTTTCTTCT---TCATTG------------------------------------ATCACACGC---CTTGTACCTGCATCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCA---GCAGAT---------GAC---------------------------GGCACAAAG------------------ATCCTTTGG---GGCGTTCTCTCCACAATTCCTTTCCTATACATTCTCTACGTATTG---------------TTC------GTT---GAGCTTGGTAAGTCACTTGATCGCCAA---------------CCAGCAGGAGTT---GCA---GCG---ACT---GTA---GGT---CGTCTA---CGTTGGCTTCTACTTGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCGATGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LLTVPLLLVEVIAVLAL---T-KAVSS-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-AD---D---------GTK------ILW-GVLSTIPFLYILYVL-----F--V-ELGKSLDRQ-----PAGV-A-A-T-V-G-RL-RWLLLA---------------------TW---GVYPMV------------------------------------------------------------------------------------------------ [Actinorhodopsin]_FJ545178 [Actinorhodopsin] clone_Erie_LG_H1_rhodopsin_gene_partial_cds_FJ545178 gi|224384031|gb|FJ545178| Uncultured microorganism clone Erie.LG.H1 putative rhodopsin gene, partial cds. Uncultured microorganism clone Erie.LG.H1 putative rhodopsin gene, partial cds. FJ545178 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juil-05 Lake Erie other freshwater 41.9461 -81.6461 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTACTAACTGTTCCACTACTTCTAGTTGAAGTTATTGCTGTACTCGCTCTTACAAAGGCAGTTTCTTCTTCATTGATCACACGCCTTGTACCTGCATCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAGATTTCAGCAGATGACGGCACAAAGATCCTTTGGGGCGTTCTCTCCACAATTCCTTTCCTATACATTCTCTACGTATTGTTCGTTGAGCTTGGTAAGTCACTTGATCGCCAACCAGCAGGAGTTGCAGCGACTGTAGGTCGTCTACGTTGGCTTCTACTTGCAACA LLTVPLLLVEVIAVLALTKAVSSSLITRLVPASAAMIALGYPGEISADDGTKILWGVLSTIPFLYILYVLFVELGKSLDRQPAGVAATVGRLRWLLLAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTAACTGTTCCACTACTTCTAGTTGAAGTTATTGCTGTACTCGCTCTT---------ACA---AAGGCAGTTTCTTCT---TCATTG------------------------------------ATCACACGC---CTTGTACCTGCATCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCA---GCAGAT---------GAC---------------------------GGCACAAAG------------------ATCCTTTGG---GGCGTTCTCTCCACAATTCCTTTCCTATACATTCTCTACGTATTG---------------TTC------GTT---GAGCTTGGTAAGTCACTTGATCGCCAA---------------CCAGCAGGAGTT---GCA---GCG---ACT---GTA---GGT---CGTCTA---CGTTGGCTTCTACTTGCA---------------------------------------------------------------ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLLVEVIAVLAL---T-KAVSS-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-AD---D---------GTK------ILW-GVLSTIPFLYILYVL-----F--V-ELGKSLDRQ-----PAGV-A-A-T-V-G-RL-RWLLLA---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_FJ545193 [Actinorhodopsin] clone_Erie_LGR_H1_rhodopsin_gene_partial_cds_FJ545193 gi|224384061|gb|FJ545193| Uncultured microorganism clone Erie.LGR.H1 putative rhodopsin gene, partial cds. Uncultured microorganism clone Erie.LGR.H1 putative rhodopsin gene, partial cds. FJ545193 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juil-05 Lake Erie other freshwater 41.9461 -81.6461 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTAACTGTTCCACTACTTCTAGTTGAAGTTATTGCTGTACTCGCTCTTACAAAGGCAGTTTCTTCTTCATTGATCACACGCCTTGTACCTGCATCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAGATTTCAGCAGATGACGGCACAAAGATCCTTTGGGGCGTTCTCTCCACAATTCCTTTCCTATACATTCTCTACGTATTGTTCGTTGAGCTTGGTAAGTCACTTGATCGCCAACCAGCAGGAGTTGCAGCGACTGTAGGTCGTCTACGTTGGCTTCTACTTGCAACA LTVPLLLVEVIAVLALTKAVSSSLITRLVPASAAMIALGYPGEISADDGTKILWGVLSTIPFLYILYVLFVELGKSLDRQPAGVAATVGRLRWLLLAT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAACTGTTCCACTACTTCTAGTTGAAGTTATTGCTGTACTCGCTCTT---------ACA---AAGGCAGTTTCTTCT---TCATTG------------------------------------ATCACACGC---CTTGTACCTGCATCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAG---------ATT------------------------------------------------------------------------------TCA---GCAGAT---------GAC---------------------------GGCACAAAG------------------ATCCTTTGG---GGCGTTCTCTCCACAATTCCTTTCCTATACATTCTCTACGTATTG---------------TTC------GTT---GAGCTTGGTAAGTCACTTGATCGCCAA---------------CCAGCAGGAGTT---GCA---GCG---ACT---GTA---GGT---CGTCTA---CGTTGGCTTCTACTTGCA---------------------------------------------------------------ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTVPLLLVEVIAVLAL---T-KAVSS-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-AD---D---------GTK------ILW-GVLSTIPFLYILYVL-----F--V-ELGKSLDRQ-----PAGV-A-A-T-V-G-RL-RWLLLA---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663796 [Actinorhodopsin] SCGC_AAA044C09_Actinobacteria_HQ663796 gi|325163190|gb|HQ663796| Actinobacterium SCGC AAA044C09 rhodopsin gene, partial cds Actinobacterium SCGC AAA044C09 rhodopsin gene, partial cds HQ663796 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938514 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TGGCTACTAACTGTGCCACTACTTCTAGTTGAAGTAATTGCTGTACTCGCTCTTGCAAAGGCTGCATCATCATCATTAATCACACGCCTTGTACCTGCATCAGCAGCGATGATCGCACTTGGTTACCCAGGTGAAGTTTCAGCAGATGACGGCACAAAAATCCTTTACGGTGTGCTTTCAACAATTCCTTTCCTCTACATCCTTTACGTATTGTTCGTAGAGCTTGGTAAGTCACTTGATCGCCAACCTGCAGGAGTAGCAGCGACAGTAGGTCGTCTACGTCTTCTTCTCATTGGTACATGGGGCGTCTACCCAATGGTCATA WLLTVPLLLVEVIAVLALAKAASSSLITRLVPASAAMIALGYPGEVSADDGTKILYGVLSTIPFLYILYVLFVELGKSLDRQPAGVAATVGRLRLLLIGTWGVYPMVI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------CTACTAACTGTGCCACTACTTCTAGTTGAAGTAATTGCTGTACTCGCTCTT---------GCA---AAGGCTGCATCATCA---TCATTA------------------------------------ATCACACGC---CTTGTACCTGCATCAGCAGCGATGATCGCACTTGGTTACCCAGGTGAA---------GTT------------------------------------------------------------------------------TCA---GCAGAT---------GAC---------------------------GGCACAAAA------------------ATCCTTTAC---GGTGTGCTTTCAACAATTCCTTTCCTCTACATCCTTTACGTATTG---------------TTC------GTA---GAGCTTGGTAAGTCACTTGATCGCCAA---------------CCTGCAGGAGTA---GCA---GCG---ACA---GTA---GGT---CGTCTA---CGTCTTCTTCTCATTGGT---------------------------------------------------------------ACATGG---------GGCGTCTACCCAATGGTCATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLLVEVIAVLAL---A-KAASS-SL------------ITR-LVPASAAMIALGYPGE---V--------------------------S-AD---D---------GTK------ILY-GVLSTIPFLYILYVL-----F--V-ELGKSLDRQ-----PAGV-A-A-T-V-G-RL-RLLLIG---------------------TW---GVYPMVI----------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601739 [Actinorhodopsin] clone_27-6_KC601739 gi|523706472|gb|KC601739| Uncultured bacterium clone 27-6 actinorhodopsin gene, partial cds. Uncultured bacterium clone 27-6 actinorhodopsin gene, partial cds. KC601739 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 oligo-mesotrophic deep submontane freshwater lake other freshwater 47.82 13.38 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGGTACGTTGATTGGCTACTAACTGTTCCACTACTTCTAGTTGAAGTAATTGCAGTACTCGCTCTTGCAAAGGCTGCTTCATCTTCATTGATCACACGCCTTGTACCTGCTTCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAAATCTCAACAGATGACGGCACAAAGATCCTTTGGGGCGTACTCTCATCAATTCCTTTCCTATACATCCTTTACGTATTGTTCGTAGAGCTTGGTAAGTCACTTGATCGCCAACCAGCAGGAGTAGCAGCGACAGTAGGTCGTCTACGTCTTCTTCTCATTGGTACATGGGGAGTCTACCCGAT RYVDWLLTVPLLLVEVIAVLALAKAASSSLITRLVPASAAMIALGYPGEISTDDGTKILWGVLSSIPFLYILYVLFVELGKSLDRQPAGVAATVGRLRLLLIGTWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTACGTTGATTGG------------------------CTACTAACTGTTCCACTACTTCTAGTTGAAGTAATTGCAGTACTCGCTCTT---------GCA---AAGGCTGCTTCATCT---TCATTG------------------------------------ATCACACGC---CTTGTACCTGCTTCAGCTGCGATGATCGCACTTGGTTACCCAGGTGAA---------ATC------------------------------------------------------------------------------TCA---ACAGAT---------GAC---------------------------GGCACAAAG------------------ATCCTTTGG---GGCGTACTCTCATCAATTCCTTTCCTATACATCCTTTACGTATTG---------------TTC------GTA---GAGCTTGGTAAGTCACTTGATCGCCAA---------------CCAGCAGGAGTA---GCA---GCG---ACA---GTA---GGT---CGTCTA---CGTCTTCTTCTCATTGGT---------------------------------------------------------------ACATGG---------GGAGTCTACCCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLLLVEVIAVLAL---A-KAASS-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-TD---D---------GTK------ILW-GVLSSIPFLYILYVL-----F--V-ELGKSLDRQ-----PAGV-A-A-T-V-G-RL-RLLLIG---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_FJ545189 [Actinorhodopsin] clone_Erie_LGR_D1_rhodopsin_gene_partial_cds_FJ545189 gi|224384053|gb|FJ545189| Uncultured microorganism clone Erie.LGR.D1 putative rhodopsin gene, partial cds. Uncultured microorganism clone Erie.LGR.D1 putative rhodopsin gene, partial cds. FJ545189 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juil-05 Lake Erie other freshwater 41.9461 -81.6461 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTAACTGTTCCACTACTTCTAGTTGAAGTTATTGCTGTACTCGCTCTTGCAAAAGCCGCGTCATCTTCATTGATCACACGCCTTGTACCTGCATCAGCTGCGATGATCGCACTTGGTTACCCAGGCGAAATCTCATCAGATGACGGCACAAAGATCCTTTGGGGCGTTCTCTCCACAATTCCTTTCCTATACATCCTGTATGTATTGTTCGTAGAGCTCGGTAAGTCACTTGATCGCCAACCAGCAGGAGTAGCAGCGACAGTAGGTCGTCTACGTCTTCTTCTCATTGGTACA LTVPLLLVEVIAVLALAKAASSSLITRLVPASAAMIALGYPGEISSDDGTKILWGVLSTIPFLYILYVLFVELGKSLDRQPAGVAATVGRLRLLLIGT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAACTGTTCCACTACTTCTAGTTGAAGTTATTGCTGTACTCGCTCTT---------GCA---AAAGCCGCGTCATCT---TCATTG------------------------------------ATCACACGC---CTTGTACCTGCATCAGCTGCGATGATCGCACTTGGTTACCCAGGCGAA---------ATC------------------------------------------------------------------------------TCA---TCAGAT---------GAC---------------------------GGCACAAAG------------------ATCCTTTGG---GGCGTTCTCTCCACAATTCCTTTCCTATACATCCTGTATGTATTG---------------TTC------GTA---GAGCTCGGTAAGTCACTTGATCGCCAA---------------CCAGCAGGAGTA---GCA---GCG---ACA---GTA---GGT---CGTCTA---CGTCTTCTTCTCATTGGT---------------------------------------------------------------ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTVPLLLVEVIAVLAL---A-KAASS-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-SD---D---------GTK------ILW-GVLSTIPFLYILYVL-----F--V-ELGKSLDRQ-----PAGV-A-A-T-V-G-RL-RLLLIG---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_FJ545192 [Actinorhodopsin] clone_Erie_LGR_G1_rhodopsin_gene_partial_cds_FJ545192 gi|224384059|gb|FJ545192| Uncultured microorganism clone Erie.LGR.G1 putative rhodopsin gene, partial cds. Uncultured microorganism clone Erie.LGR.G1 putative rhodopsin gene, partial cds. FJ545192 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juil-05 Lake Erie other freshwater 41.9461 -81.6461 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTAACTGTTCCACTACTTCTAGTTGAAGTTATTGCTGTACTCGCTCTTGCAAAGGCCGCGTCATCTTCATTGATCACACGCCTTGTACCTGCATCAGCTGCGATGATCGCACTTGGTTACCCAGGCGAAATCTCATCAGATGACGGCACAAAGATCCTTTGGGGCGTTCTCTCCACAATTCCTTTCCTATACATTCTCTACGTATTGTTCGTTGAGCTCGGTAAGTCACTTGATCGCCAACCAGCAGGAGTAGCAGCGACAGTAGGTCGTCTACGTCTTCTTCTCATTGGTACA LTVPLLLVEVIAVLALAKAASSSLITRLVPASAAMIALGYPGEISSDDGTKILWGVLSTIPFLYILYVLFVELGKSLDRQPAGVAATVGRLRLLLIGT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAACTGTTCCACTACTTCTAGTTGAAGTTATTGCTGTACTCGCTCTT---------GCA---AAGGCCGCGTCATCT---TCATTG------------------------------------ATCACACGC---CTTGTACCTGCATCAGCTGCGATGATCGCACTTGGTTACCCAGGCGAA---------ATC------------------------------------------------------------------------------TCA---TCAGAT---------GAC---------------------------GGCACAAAG------------------ATCCTTTGG---GGCGTTCTCTCCACAATTCCTTTCCTATACATTCTCTACGTATTG---------------TTC------GTT---GAGCTCGGTAAGTCACTTGATCGCCAA---------------CCAGCAGGAGTA---GCA---GCG---ACA---GTA---GGT---CGTCTA---CGTCTTCTTCTCATTGGT---------------------------------------------------------------ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTVPLLLVEVIAVLAL---A-KAASS-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-SD---D---------GTK------ILW-GVLSTIPFLYILYVL-----F--V-ELGKSLDRQ-----PAGV-A-A-T-V-G-RL-RLLLIG---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HE646812 [Actinorhodopsin] clone_IofNWEx9_HE646812 gi|363805790|gb|HE646812| Uncultured bacterium partial actR gene for Actinorhodopsin, clone IofNWEx9. Uncultured bacterium partial actR gene for Actinorhodopsin, clone IofNWEx9. HE646812 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 19-nov-12 2010 Lake Stechlin surface water other freshwater 53.17 13.03 Environmental actinorhodopsin expression revealed by a new in situ filtration and fixation sampler Wurzbacher,C., Salka,I. and Grossart,H.P. Environ Microbiol Rep 4 (5), 491-497 (2012) 23760893 acI-like TACCGTTACGTGGACTGGCTACTAACTGTGCCACTACTTCTAGTTGAAGTAGTTGCTGTACTCGCTCTTGCAAAGGCCGCGTCATCTTCATTGATCACACGCCTTGTACCTGCATCAGCTGCAATGATCGCACTTGGTTACCCAGGTGAAATCTCAGCAGATGACGGCACAAAGATCCTTTGGGGCGTTCTCTCCACAATTCCTTTCCTATACATCCTGTATGTATTGTTCGTAGAGCTCGGTAAGTCACTTGATCGCCAACCAGCAGGTGTAGCAGCGACTATTGGTCGCCTACGTCTACTTCTGATTGCGACATGGGGTGTCTACCCTATA YRYVDWLLTVPLLLVEVVAVLALAKAASSSLITRLVPASAAMIALGYPGEISADDGTKILWGVLSTIPFLYILYVLFVELGKSLDRQPAGVAATIGRLRLLLIATWGVYPI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCGTTACGTGGACTGG------------------------CTACTAACTGTGCCACTACTTCTAGTTGAAGTAGTTGCTGTACTCGCTCTT---------GCA---AAGGCCGCGTCATCT---TCATTG------------------------------------ATCACACGC---CTTGTACCTGCATCAGCTGCAATGATCGCACTTGGTTACCCAGGTGAA---------ATC------------------------------------------------------------------------------TCA---GCAGAT---------GAC---------------------------GGCACAAAG------------------ATCCTTTGG---GGCGTTCTCTCCACAATTCCTTTCCTATACATCCTGTATGTATTG---------------TTC------GTA---GAGCTCGGTAAGTCACTTGATCGCCAA---------------CCAGCAGGTGTA---GCA---GCG---ACT---ATT---GGT---CGCCTA---CGTCTACTTCTGATTGCG---------------------------------------------------------------ACATGG---------GGTGTCTACCCTATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYVDW--------LLTVPLLLVEVVAVLAL---A-KAASS-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-AD---D---------GTK------ILW-GVLSTIPFLYILYVL-----F--V-ELGKSLDRQ-----PAGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVYPI------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HE646866 [Actinorhodopsin] clone_QixNWEx9_HE646866 gi|363805898|gb|HE646866| Uncultured bacterium partial actR gene for Actinorhodopsin, clone QixNWEx9. Uncultured bacterium partial actR gene for Actinorhodopsin, clone QixNWEx9. HE646866 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 19-nov-12 2010 Lake Stechlin surface water other freshwater 53.17 13.03 Environmental actinorhodopsin expression revealed by a new in situ filtration and fixation sampler Wurzbacher,C., Salka,I. and Grossart,H.P. Environ Microbiol Rep 4 (5), 491-497 (2012) 23760893 acI-like TACCGATACGTTGACTGGCTACTAACTGTGCCACTACTTCTAGTTGAAGTAGTTGCTGTACTCGCTCTTGCAAAGGCCGCGTCATCTTCATTGATCACACGCCTTGTACCTGCATCAGCTGCAATGATCGCACTTGGTTACCCAGGTGAAATCTCAGCAGATGACGGCACAAAGATCCTTTGGGGCGTTCTCTCCACAATTCCTTTCCTATACATCCTGTATGTATTGTTCGTAGAGCTCGGTAAGTCACTTGATCGCCAACCAGCAGGTGTAGCAGCGACTATTGGTCGCCTACGTCTACTTCTGATTGCGACATGGGGCGTCTATCCAATA YRYVDWLLTVPLLLVEVVAVLALAKAASSSLITRLVPASAAMIALGYPGEISADDGTKILWGVLSTIPFLYILYVLFVELGKSLDRQPAGVAATIGRLRLLLIATWGVYPI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCGATACGTTGACTGG------------------------CTACTAACTGTGCCACTACTTCTAGTTGAAGTAGTTGCTGTACTCGCTCTT---------GCA---AAGGCCGCGTCATCT---TCATTG------------------------------------ATCACACGC---CTTGTACCTGCATCAGCTGCAATGATCGCACTTGGTTACCCAGGTGAA---------ATC------------------------------------------------------------------------------TCA---GCAGAT---------GAC---------------------------GGCACAAAG------------------ATCCTTTGG---GGCGTTCTCTCCACAATTCCTTTCCTATACATCCTGTATGTATTG---------------TTC------GTA---GAGCTCGGTAAGTCACTTGATCGCCAA---------------CCAGCAGGTGTA---GCA---GCG---ACT---ATT---GGT---CGCCTA---CGTCTACTTCTGATTGCG---------------------------------------------------------------ACATGG---------GGCGTCTATCCAATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYVDW--------LLTVPLLLVEVVAVLAL---A-KAASS-SL------------ITR-LVPASAAMIALGYPGE---I--------------------------S-AD---D---------GTK------ILW-GVLSTIPFLYILYVL-----F--V-ELGKSLDRQ-----PAGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVYPI------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663809 [Actinorhodopsin] SCGC_AAA044N11_Actinobacteria_HQ663809 gi|325163215|gb|HQ663809| Actinobacterium SCGC AAA044N11 rhodopsin gene, partial cds Actinobacterium SCGC AAA044N11 rhodopsin gene, partial cds HQ663809 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938535 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTTGATTGGCTACTAACTGTGCCACTACTTCTTGTTGAAGTAATTGCTGTACTCGCTCTTGCAAAGGCTGCGTCATCTTCATTGATCACACGCCTTGTTCCAGCAGCTGCTGCGATGATCGCACTTGGTTACCCAGGTGAAGTTTCAGCAGATGATGGCACCAAGATCCTTTGGGGCGTTCTCTCAACAATTCCTTTCCTTTACATCCTTTACGTATTGTTCGTAGAGCTTGGTAAGTCACTCGATCGCCAACCAGCAGGAGTAGGAGCGACAGTAGGTCGCCTACGTCTTCTTCTGATTGCAACATGGGGTGTGTACCCGATGGTCATA YVDWLLTVPLLLVEVIAVLALAKAASSSLITRLVPAAAAMIALGYPGEVSADDGTKILWGVLSTIPFLYILYVLFVELGKSLDRQPAGVGATVGRLRLLLIATWGVYPMVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTTGATTGG------------------------CTACTAACTGTGCCACTACTTCTTGTTGAAGTAATTGCTGTACTCGCTCTT---------GCA---AAGGCTGCGTCATCT---TCATTG------------------------------------ATCACACGC---CTTGTTCCAGCAGCTGCTGCGATGATCGCACTTGGTTACCCAGGTGAA---------GTT------------------------------------------------------------------------------TCA---GCAGAT---------GAT---------------------------GGCACCAAG------------------ATCCTTTGG---GGCGTTCTCTCAACAATTCCTTTCCTTTACATCCTTTACGTATTG---------------TTC------GTA---GAGCTTGGTAAGTCACTCGATCGCCAA---------------CCAGCAGGAGTA---GGA---GCG---ACA---GTA---GGT---CGCCTA---CGTCTTCTTCTGATTGCA---------------------------------------------------------------ACATGG---------GGTGTGTACCCGATGGTCATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLLVEVIAVLAL---A-KAASS-SL------------ITR-LVPAAAAMIALGYPGE---V--------------------------S-AD---D---------GTK------ILW-GVLSTIPFLYILYVL-----F--V-ELGKSLDRQ-----PAGV-G-A-T-V-G-RL-RLLLIA---------------------TW---GVYPMVI----------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663782 [Actinorhodopsin] SCGC_AAA043D06_Actinobacteria_HQ663782 gi|325163163|gb|HQ663782| Actinobacterium SCGC AAA043D06 rhodopsin gene, partial cds Actinobacterium SCGC AAA043D06 rhodopsin gene, partial cds HQ663782 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938487 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTAGATTGGCTACTAACTGTGCCACTACTTCTAGTTGAAGTAATTGCAGTACTCGCTCTTGCAAAGGCTGCAGCATCTTCAATGATCACACGCCTTGTTCCATCAGCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAAATCTCAGCAGACAATGGCACCAAAATTCTTTGGGGCGTTCTTTCAACAATTCCATTCCTTTACATCCTTTACGTATTGTTCGTAGAGCTCGGTAAGTCACTTGATCGTCAACCTGCAGGAGTTGCAGGAACAATCGGTCGCCTACGCTGGCTTCTACTTGCTACATGGGGCGTCTACCCGATGGTCATA YVDWLLTVPLLLVEVIAVLALAKAAASSMITRLVPSAAAMIALGYPGEISADNGTKILWGVLSTIPFLYILYVLFVELGKSLDRQPAGVAGTIGRLRWLLLATWGVYPMVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTAGATTGG------------------------CTACTAACTGTGCCACTACTTCTAGTTGAAGTAATTGCAGTACTCGCTCTT---------GCA---AAGGCTGCAGCATCT---TCAATG------------------------------------ATCACACGC---CTTGTTCCATCAGCTGCTGCAATGATCGCACTTGGTTACCCAGGTGAA---------ATC------------------------------------------------------------------------------TCA---GCAGAC---------AAT---------------------------GGCACCAAA------------------ATTCTTTGG---GGCGTTCTTTCAACAATTCCATTCCTTTACATCCTTTACGTATTG---------------TTC------GTA---GAGCTCGGTAAGTCACTTGATCGTCAA---------------CCTGCAGGAGTT---GCA---GGA---ACA---ATC---GGT---CGCCTA---CGCTGGCTTCTACTTGCT---------------------------------------------------------------ACATGG---------GGCGTCTACCCGATGGTCATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLLVEVIAVLAL---A-KAAAS-SM------------ITR-LVPSAAAMIALGYPGE---I--------------------------S-AD---N---------GTK------ILW-GVLSTIPFLYILYVL-----F--V-ELGKSLDRQ-----PAGV-A-G-T-I-G-RL-RWLLLA---------------------TW---GVYPMVI----------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601697 [Actinorhodopsin] clone_17-7_KC601697 gi|523706388|gb|KC601697| Uncultured bacterium clone 17-7 actinorhodopsin gene, partial cds. Uncultured bacterium clone 17-7 actinorhodopsin gene, partial cds. KC601697 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 humic freshwater reservoir other freshwater 48.6158 14.6762 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGTTACGTAGACTGGATCCTTACTGTTCCACTATTGCTCGTAGAAGTTATTGCAGTACTTGCTCTTGCAAAGGCTGCTGCTTCATCTCTTATCGGTCGCCTTGTACCTGCATCTGCAGCAATGATCGCACTTGGTTACCCAGGTGAAATCGCAACTGCTAACGGTACAAAGATCGTATGGGGCATTCTTTCAACAATTCCATTCCTCTACATCCTTTACGTATTGTTCGTAGAGCTTGGTAAGTCACTTGAGCGTCAACCAGAAGGCGTTGCAGCAACAGTAGGTCGCCTACGTTTGCTACTTATCGCAACATGGGGCGTCTATCCTAT RYVDWILTVPLLLVEVIAVLALAKAAASSLIGRLVPASAAMIALGYPGEIATANGTKIVWGILSTIPFLYILYVLFVELGKSLERQPEGVAATVGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTACGTAGACTGG------------------------ATCCTTACTGTTCCACTATTGCTCGTAGAAGTTATTGCAGTACTTGCTCTT---------GCA---AAGGCTGCTGCTTCA---TCTCTT------------------------------------ATCGGTCGC---CTTGTACCTGCATCTGCAGCAATGATCGCACTTGGTTACCCAGGTGAA---------ATC------------------------------------------------------------------------------GCA---ACTGCT---------AAC---------------------------GGTACAAAG------------------ATCGTATGG---GGCATTCTTTCAACAATTCCATTCCTCTACATCCTTTACGTATTG---------------TTC------GTA---GAGCTTGGTAAGTCACTTGAGCGTCAA---------------CCAGAAGGCGTT---GCA---GCA---ACA---GTA---GGT---CGCCTA---CGTTTGCTACTTATCGCA---------------------------------------------------------------ACATGG---------GGCGTCTATCCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------ILTVPLLLVEVIAVLAL---A-KAAAS-SL------------IGR-LVPASAAMIALGYPGE---I--------------------------A-TA---N---------GTK------IVW-GILSTIPFLYILYVL-----F--V-ELGKSLERQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HF571294 [Actinorhodopsin] clone_BSActR_OTU20_HF571294 gi|528066049|gb|HF571294| Uncultured bacterium partial actR gene for Actinorhodopsin, clone BSActR OTU20. Uncultured bacterium partial actR gene for Actinorhodopsin, clone BSActR OTU20. HF571294 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-juil-13 #na brackish water Baltic Sea marine 57.8 20 Distribution of acI-Actinorhodopsin genes in Baltic Sea salinity gradients indicates the success of facultative freshwater photoheterotrophs in brackish waters Salka,I., Wurzbacher,C., Garcia,S.L., Labrenz,M., Juergens,K. and Grossart,H.P. Unpublished #na #na TATCGGTATGTTGATTGGATCTTGACTGTACCTCTACTACTAGTAGAAGTTATTGCTGTACTTGCTCTTGCTAAGGCAGCTGCAAGTTCACTAATCGCTCGCCTTGTTCCTGCATCAGCAGCAATGATTGCACTTGGATACCCAGGTGAAATAGCAACAGAGACTGGACCAAAGGTAATTTGGGGTGTTCTTTCAACACTTCCATTCCTATACATCCTTTACGTCCTATTCGTAGAGCTAGGTAAGTCACTTGATCGCCAACCAGAAGGTGTAGCAGCTACCGTTGGTCGCCTACGTCTTCTATTGATCGCAACATGGGGCGTTTATCCAATA YRYVDWILTVPLLLVEVIAVLALAKAAASSLIARLVPASAAMIALGYPGEIATETGPKVIWGVLSTLPFLYILYVLFVELGKSLDRQPEGVAATVGRLRLLLIATWGVYPI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCGGTATGTTGATTGG------------------------ATCTTGACTGTACCTCTACTACTAGTAGAAGTTATTGCTGTACTTGCTCTT---------GCT---AAGGCAGCTGCAAGT---TCACTA------------------------------------ATCGCTCGC---CTTGTTCCTGCATCAGCAGCAATGATTGCACTTGGATACCCAGGTGAA---------ATA------------------------------------------------------------------------------GCA---ACAGAG---------ACT---------------------------GGACCAAAG------------------GTAATTTGG---GGTGTTCTTTCAACACTTCCATTCCTATACATCCTTTACGTCCTA---------------TTC------GTA---GAGCTAGGTAAGTCACTTGATCGCCAA---------------CCAGAAGGTGTA---GCA---GCT---ACC---GTT---GGT---CGCCTA---CGTCTTCTATTGATCGCA---------------------------------------------------------------ACATGG---------GGCGTTTATCCAATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYVDW--------ILTVPLLLVEVIAVLAL---A-KAAAS-SL------------IAR-LVPASAAMIALGYPGE---I--------------------------A-TE---T---------GPK------VIW-GVLSTLPFLYILYVL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYPI------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HF571295 [Actinorhodopsin] clone_BSActR_OTU4_HF571295 gi|528066051|gb|HF571295| Uncultured bacterium partial actR gene for Actinorhodopsin, clone BSActR OTU4. Uncultured bacterium partial actR gene for Actinorhodopsin, clone BSActR OTU4. HF571295 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-juil-13 #na brackish water Baltic Sea marine 57.8 20 Distribution of acI-Actinorhodopsin genes in Baltic Sea salinity gradients indicates the success of facultative freshwater photoheterotrophs in brackish waters Salka,I., Wurzbacher,C., Garcia,S.L., Labrenz,M., Juergens,K. and Grossart,H.P. Unpublished #na #na TATCGTTACGTTGACTGGATCTTGACTGTACCTCTACTACTTGTAGAAGTTATTGCTGTACTTGCTCTTGCTAAGGCAGCTGCAAGTTCACTAATCGGTCGTCTTGTTCCTGCATCAGCAGCAATGATTGCACTTGGATATCCAGGTGAAATCTCAGCAGACACAAACACCAAAGTAATTTGGGGTGTTCTTTCAACACTTCCTTTCCTATACATCCTTTACGTCCTATTCGTAGAGCTAGGTAAGTCACTTGATCGTCAACCAGAAGGTGTAGCAGCTACCGTTGGTCGCCTACGTCTTCTATTGATCGCGACATGGGGCGTATACCCAATA YRYVDWILTVPLLLVEVIAVLALAKAAASSLIGRLVPASAAMIALGYPGEISADTNTKVIWGVLSTLPFLYILYVLFVELGKSLDRQPEGVAATVGRLRLLLIATWGVYPI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCGTTACGTTGACTGG------------------------ATCTTGACTGTACCTCTACTACTTGTAGAAGTTATTGCTGTACTTGCTCTT---------GCT---AAGGCAGCTGCAAGT---TCACTA------------------------------------ATCGGTCGT---CTTGTTCCTGCATCAGCAGCAATGATTGCACTTGGATATCCAGGTGAA---------ATC------------------------------------------------------------------------------TCA---GCAGAC---------ACA---------------------------AACACCAAA------------------GTAATTTGG---GGTGTTCTTTCAACACTTCCTTTCCTATACATCCTTTACGTCCTA---------------TTC------GTA---GAGCTAGGTAAGTCACTTGATCGTCAA---------------CCAGAAGGTGTA---GCA---GCT---ACC---GTT---GGT---CGCCTA---CGTCTTCTATTGATCGCG---------------------------------------------------------------ACATGG---------GGCGTATACCCAATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYVDW--------ILTVPLLLVEVIAVLAL---A-KAAAS-SL------------IGR-LVPASAAMIALGYPGE---I--------------------------S-AD---T---------NTK------VIW-GVLSTLPFLYILYVL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYPI------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HF571300 [Actinorhodopsin] clone_BSActR_OTU8_HF571300 gi|528066061|gb|HF571300| Uncultured bacterium partial actR gene for Actinorhodopsin, clone BSActR OTU8. Uncultured bacterium partial actR gene for Actinorhodopsin, clone BSActR OTU8. HF571300 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-juil-13 #na brackish water Baltic Sea marine 57.8 20 Distribution of acI-Actinorhodopsin genes in Baltic Sea salinity gradients indicates the success of facultative freshwater photoheterotrophs in brackish waters Salka,I., Wurzbacher,C., Garcia,S.L., Labrenz,M., Juergens,K. and Grossart,H.P. Unpublished #na #na TACCGTTATGTGGACTGGATCCTGACAGTACCTCTATTACTTGTAGAAGTTATTGCTGTTCTTGCACTAGCTAAGGCTGCAGCAAAGTCACTTATTGCTCGCCTAGTTCCTGCATCAGCAGCGATGATTGCACTTGGTTACCCAGGTGAAATCGCAACTGATACAAACTCCAAAGTAATTTGGGGCGTTCTATCAACAATTCCATTCATTTACATCCTTTACGTATTATTCGTAGAGCTAGGTAAGTCACTTGATCGCCAACCAGAAGGTGTAGCCGCAACCGTTGGTCGCCTACGTCTTCTATTGATCGCGACATGGGGCGTATACCCAATA YRYVDWILTVPLLLVEVIAVLALAKAAAKSLIARLVPASAAMIALGYPGEIATDTNSKVIWGVLSTIPFIYILYVLFVELGKSLDRQPEGVAATVGRLRLLLIATWGVYPI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCGTTATGTGGACTGG------------------------ATCCTGACAGTACCTCTATTACTTGTAGAAGTTATTGCTGTTCTTGCACTA---------GCT---AAGGCTGCAGCAAAG---TCACTT------------------------------------ATTGCTCGC---CTAGTTCCTGCATCAGCAGCGATGATTGCACTTGGTTACCCAGGTGAA---------ATC------------------------------------------------------------------------------GCA---ACTGAT---------ACA---------------------------AACTCCAAA------------------GTAATTTGG---GGCGTTCTATCAACAATTCCATTCATTTACATCCTTTACGTATTA---------------TTC------GTA---GAGCTAGGTAAGTCACTTGATCGCCAA---------------CCAGAAGGTGTA---GCC---GCA---ACC---GTT---GGT---CGCCTA---CGTCTTCTATTGATCGCG---------------------------------------------------------------ACATGG---------GGCGTATACCCAATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYVDW--------ILTVPLLLVEVIAVLAL---A-KAAAK-SL------------IAR-LVPASAAMIALGYPGE---I--------------------------A-TD---T---------NSK------VIW-GVLSTIPFIYILYVL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYPI------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663800 [Actinorhodopsin] SCGC_AAA044D11_Actinobacteria_HQ663800 gi|325163198|gb|HQ663800| Actinobacterium SCGC AAA044D11 rhodopsin gene, partial cds Actinobacterium SCGC AAA044D11 rhodopsin gene, partial cds HQ663800 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938518 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTTGATTGGATCCTTACAGTACCTCTACTTCTAGTTGAAGTAATTGCTGTTCTTGCGCTTGCTAAGGCTGCAGCAAGTTCACTAATTTCTCGCCTTGTCCCTGCATCAGCAGCGATGATCGCACTTGGTTACCCAGGTGAAATTTCAGCTGATACAAACACCAAAGTAATTTGGGGCGTTCTATCAACACTTCCATTCCTTTACATCCTTTATGTTCTATTCGTAGAACTAGGAAAGTCACTTGATCGTCAACCAGAAGGTGTAGCAGCAACAGTTGGTCGCCTACGTCTTCTATTGATCGCAACATGGGGCGTCTACCCAATGGTCATA YVDWILTVPLLLVEVIAVLALAKAAASSLISRLVPASAAMIALGYPGEISADTNTKVIWGVLSTLPFLYILYVLFVELGKSLDRQPEGVAATVGRLRLLLIATWGVYPMVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTTGATTGG------------------------ATCCTTACAGTACCTCTACTTCTAGTTGAAGTAATTGCTGTTCTTGCGCTT---------GCT---AAGGCTGCAGCAAGT---TCACTA------------------------------------ATTTCTCGC---CTTGTCCCTGCATCAGCAGCGATGATCGCACTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---GCTGAT---------ACA---------------------------AACACCAAA------------------GTAATTTGG---GGCGTTCTATCAACACTTCCATTCCTTTACATCCTTTATGTTCTA---------------TTC------GTA---GAACTAGGAAAGTCACTTGATCGTCAA---------------CCAGAAGGTGTA---GCA---GCA---ACA---GTT---GGT---CGCCTA---CGTCTTCTATTGATCGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCAATGGTCATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------ILTVPLLLVEVIAVLAL---A-KAAAS-SL------------ISR-LVPASAAMIALGYPGE---I--------------------------S-AD---T---------NTK------VIW-GVLSTLPFLYILYVL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYPMVI----------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663818 [Actinorhodopsin] SCGC_AAA278G03_Actinobacteria_HQ663818 gi|325163233|gb|HQ663818| Actinobacterium SCGC AAA278G03 rhodopsin gene, partial cds Actinobacterium SCGC AAA278G03 rhodopsin gene, partial cds HQ663818 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938553 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTAGATTGGATTCTGACAGTACCTCTACTTCTTGTAGAAGTAATTGCTGTTCTTGCGCTAGCTAAGGCTGCAGCAAGTTCACTAATTTCTCGCCTTGTCCCTGCATCAGCAGCAATGATCGCACTTGGTTACCCAGGTGAAATTTCAGCTGATACAAACACCAAAGTAATTTGGGGCGTTCTATCAACACTTCCATTCCTATACATCCTTTACGTTCTATTCGTAGAACTAGGAAAGTCTCTTGATCGTCAACCAGAAGGTGTAGCAGCAACCGTTGGTCGCCTACGTCTTCTATTGATCGCGACATGGGGCGTCTACCCGATGGTCATA YVDWILTVPLLLVEVIAVLALAKAAASSLISRLVPASAAMIALGYPGEISADTNTKVIWGVLSTLPFLYILYVLFVELGKSLDRQPEGVAATVGRLRLLLIATWGVYPMVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTAGATTGG------------------------ATTCTGACAGTACCTCTACTTCTTGTAGAAGTAATTGCTGTTCTTGCGCTA---------GCT---AAGGCTGCAGCAAGT---TCACTA------------------------------------ATTTCTCGC---CTTGTCCCTGCATCAGCAGCAATGATCGCACTTGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCA---GCTGAT---------ACA---------------------------AACACCAAA------------------GTAATTTGG---GGCGTTCTATCAACACTTCCATTCCTATACATCCTTTACGTTCTA---------------TTC------GTA---GAACTAGGAAAGTCTCTTGATCGTCAA---------------CCAGAAGGTGTA---GCA---GCA---ACC---GTT---GGT---CGCCTA---CGTCTTCTATTGATCGCG---------------------------------------------------------------ACATGG---------GGCGTCTACCCGATGGTCATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------ILTVPLLLVEVIAVLAL---A-KAAAS-SL------------ISR-LVPASAAMIALGYPGE---I--------------------------S-AD---T---------NTK------VIW-GVLSTLPFLYILYVL-----F--V-ELGKSLDRQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYPMVI----------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601702 [Actinorhodopsin] clone_18-6_KC601702 gi|523706398|gb|KC601702| Uncultured bacterium clone 18-6 actinorhodopsin gene, partial cds. Uncultured bacterium clone 18-6 actinorhodopsin gene, partial cds. KC601702 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 humic freshwater reservoir other freshwater 48.6158 14.6762 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGTTATGTGGACTGGATTTTGACTGTACCGCTACTTCTTGTTGAAGTAATTGCTGTACTTTCACTAGCAAAGGCAGCAGCTTCTTCACTAATCGGTCGCCTTGTTCCTGCATCTGCAGCAATGATCGCACTTGGTTACCCAGGAGAAATCTCAACTGTAAACAGCACAAAGGTTTTGTTTGGTGTTCTTTCAACCATTCCATTCCTTTATATCCTTTACGTGCTATTCGTTGAACTTGGTAAGTCACTAGAGCGTCAACCAGAAGGGGTAGCAGCGACAGTTGGTCGTCTACGTCTTCTATTGATCGCAACATGGGGAGTCTACCCAAT RYVDWILTVPLLLVEVIAVLSLAKAAASSLIGRLVPASAAMIALGYPGEISTVNSTKVLFGVLSTIPFLYILYVLFVELGKSLERQPEGVAATVGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTATGTGGACTGG------------------------ATTTTGACTGTACCGCTACTTCTTGTTGAAGTAATTGCTGTACTTTCACTA---------GCA---AAGGCAGCAGCTTCT---TCACTA------------------------------------ATCGGTCGC---CTTGTTCCTGCATCTGCAGCAATGATCGCACTTGGTTACCCAGGAGAA---------ATC------------------------------------------------------------------------------TCA---ACTGTA---------AAC---------------------------AGCACAAAG------------------GTTTTGTTT---GGTGTTCTTTCAACCATTCCATTCCTTTATATCCTTTACGTGCTA---------------TTC------GTT---GAACTTGGTAAGTCACTAGAGCGTCAA---------------CCAGAAGGGGTA---GCA---GCG---ACA---GTT---GGT---CGTCTA---CGTCTTCTATTGATCGCA---------------------------------------------------------------ACATGG---------GGAGTCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------ILTVPLLLVEVIAVLSL---A-KAAAS-SL------------IGR-LVPASAAMIALGYPGE---I--------------------------S-TV---N---------STK------VLF-GVLSTIPFLYILYVL-----F--V-ELGKSLERQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601709 [Actinorhodopsin] clone_2-6_KC601709 gi|523706412|gb|KC601709| Uncultured bacterium clone 2-6 actinorhodopsin gene, partial cds. Uncultured bacterium clone 2-6 actinorhodopsin gene, partial cds. KC601709 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 humic freshwater reservoir other freshwater 48.6158 14.6762 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGGTATGTGGACTGGATTTTGACTGTACCGCTACTTCTTGTTGAAGTAATTGCTGTACTTTCACTAGCAAAGGCAGCAGCTTCTTCACTAATCGGTCGCCTTGTTCCTGCATCTGCAGCAATGATCGCACTTGGTTACCCAGGAGAAATCTCAACTGTAAACAGCACAAAGGTTTTGTTTGGTGTTCTTTCAACCATTCCATTCCTTTATATCCTTTACGTGCTATTCGTTGGACTTGGTAAGTCACTAGAGCGTCAACCAGAAGGGGTAGCAGCGACAGTTGGTCGTTTACGTCTTCTATTGATCGCAACATGGGGCGTCTACCCCAT RYVDWILTVPLLLVEVIAVLSLAKAAASSLIGRLVPASAAMIALGYPGEISTVNSTKVLFGVLSTIPFLYILYVLFVGLGKSLERQPEGVAATVGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTATGTGGACTGG------------------------ATTTTGACTGTACCGCTACTTCTTGTTGAAGTAATTGCTGTACTTTCACTA---------GCA---AAGGCAGCAGCTTCT---TCACTA------------------------------------ATCGGTCGC---CTTGTTCCTGCATCTGCAGCAATGATCGCACTTGGTTACCCAGGAGAA---------ATC------------------------------------------------------------------------------TCA---ACTGTA---------AAC---------------------------AGCACAAAG------------------GTTTTGTTT---GGTGTTCTTTCAACCATTCCATTCCTTTATATCCTTTACGTGCTA---------------TTC------GTT---GGACTTGGTAAGTCACTAGAGCGTCAA---------------CCAGAAGGGGTA---GCA---GCG---ACA---GTT---GGT---CGTTTA---CGTCTTCTATTGATCGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------ILTVPLLLVEVIAVLSL---A-KAAAS-SL------------IGR-LVPASAAMIALGYPGE---I--------------------------S-TV---N---------STK------VLF-GVLSTIPFLYILYVL-----F--V-GLGKSLERQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601690 [Actinorhodopsin] clone_16-3_KC601690 gi|523706374|gb|KC601690| Uncultured bacterium clone 16-3 actinorhodopsin gene, partial cds. Uncultured bacterium clone 16-3 actinorhodopsin gene, partial cds. KC601690 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 humic freshwater reservoir other freshwater 48.6158 14.6762 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGGTACGTGGACTGGTTCCTAACCGTTCCACTACTACTAGTCGAGCTAGTAGCAGTAATGGGTCTAGCCCGTGCCGTGCAGTCGTCATTGCTAAAGCGCCTGGTTCCAGCCGCAGCAGCCATGATTCTGCTTGGTTACCCAGGCGACATGCACACTGGTCTATTCGGCCTAGAAAACAGCGTATGGGGTCTACTTTCGACCATTCCATTCCTCTACATCATGTACGTTCTCTTCATTGAGATCAGCAAGAGCCTAAAGACTCAGTCACCAAAGGTTCAGGGTCTCCTGAAGACCGCGCGTACCCTGCTTGTAGCAACCTGGGGCGTCTATCCCAT RYVDWFLTVPLLLVELVAVMGLARAVQSSLLKRLVPAAAAMILLGYPGDMHTGLFGLENSVWGLLSTIPFLYIMYVLFIEISKSLKTQSPKVQGLLKTARTLLVATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTACGTGGACTGG------------------------TTCCTAACCGTTCCACTACTACTAGTCGAGCTAGTAGCAGTAATGGGTCTA---------GCC---CGTGCCGTGCAGTCG---TCATTG------------------------------------CTAAAGCGC---CTGGTTCCAGCCGCAGCAGCCATGATTCTGCTTGGTTACCCAGGCGAC---------ATG------------------------------------------------------------------------------CAC---ACTGGT---------CTA---------------------TTCGGCCTAGAAAAC------------------AGCGTATGG---GGTCTACTTTCGACCATTCCATTCCTCTACATCATGTACGTTCTC---------------TTC------ATT---GAGATCAGCAAGAGCCTAAAGACTCAG---------------TCACCAAAGGTT---CAG---GGT---CTC---CTG---AAG---ACCGCG---CGTACCCTGCTTGTAGCA---------------------------------------------------------------ACCTGG---------GGCGTCTATCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------FLTVPLLLVELVAVMGL---A-RAVQS-SL------------LKR-LVPAAAAMILLGYPGD---M--------------------------H-TG---L-------FGLEN------SVW-GLLSTIPFLYIMYVL-----F--I-EISKSLKTQ-----SPKV-Q-G-L-L-K-TA-RTLLVA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601701 [Actinorhodopsin] clone_18-5_KC601701 gi|523706396|gb|KC601701| Uncultured bacterium clone 18-5 actinorhodopsin gene, partial cds. Uncultured bacterium clone 18-5 actinorhodopsin gene, partial cds. KC601701 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 humic freshwater reservoir other freshwater 48.6158 14.6762 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGTTATGTAGACTGGTTCCTAACCGTTCCACTACTACTAGTCGAGCTAGTAGCAGTAATGGGTCTAGCCCGTGCCGTGCAGTCGTCATTGCTAAAGCGCCTGGTTCCAGCCGCAGCAGCCATGATTCTGCTTGGTTACCCAGGCGACATGCACACTGGTCTATTCGGCCTAGAAAACAGCGTATGGGGTCTACTTTCGACCATTCCATTCCTCTACATCATGTACGTTCTCTTCATTGAGATCAGCAAGAGCCTAAAGACTCAGTCACCAAAGGTTCAGGGTCTCCTGAAGACCGCGCGTACCCTGCTTGTAGCAACCTGGGGAGTCTACCCCAT RYVDWFLTVPLLLVELVAVMGLARAVQSSLLKRLVPAAAAMILLGYPGDMHTGLFGLENSVWGLLSTIPFLYIMYVLFIEISKSLKTQSPKVQGLLKTARTLLVATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTATGTAGACTGG------------------------TTCCTAACCGTTCCACTACTACTAGTCGAGCTAGTAGCAGTAATGGGTCTA---------GCC---CGTGCCGTGCAGTCG---TCATTG------------------------------------CTAAAGCGC---CTGGTTCCAGCCGCAGCAGCCATGATTCTGCTTGGTTACCCAGGCGAC---------ATG------------------------------------------------------------------------------CAC---ACTGGT---------CTA---------------------TTCGGCCTAGAAAAC------------------AGCGTATGG---GGTCTACTTTCGACCATTCCATTCCTCTACATCATGTACGTTCTC---------------TTC------ATT---GAGATCAGCAAGAGCCTAAAGACTCAG---------------TCACCAAAGGTT---CAG---GGT---CTC---CTG---AAG---ACCGCG---CGTACCCTGCTTGTAGCA---------------------------------------------------------------ACCTGG---------GGAGTCTACCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------FLTVPLLLVELVAVMGL---A-RAVQS-SL------------LKR-LVPAAAAMILLGYPGD---M--------------------------H-TG---L-------FGLEN------SVW-GLLSTIPFLYIMYVL-----F--I-EISKSLKTQ-----SPKV-Q-G-L-L-K-TA-RTLLVA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601694 [Actinorhodopsin] clone_17-3_KC601694 gi|523706382|gb|KC601694| Uncultured bacterium clone 17-3 actinorhodopsin gene, partial cds. Uncultured bacterium clone 17-3 actinorhodopsin gene, partial cds. KC601694 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 humic freshwater reservoir other freshwater 48.6158 14.6762 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGGTACGTTGATTGGTTCCTAACCGTTCCACTACTACTAGTCGAGCTAGTAGCAGTAATGGGTCTAGCCCGTGCCGTGCAGTCGTCATTGCTAAAGCGCCTGGTTCCAGCCGCAGCAGCCATGATTCTGCTTGGTTACCCAGGCGACATGCACACTGGTCTATTCGGCCTAGAAAACAGCGTATGGGGTCTACTTTCGACCATTCCATTCCTCTACATCATGTACGTTCTCTTCATTGAGATCAGCAAGAGCCTAAAGACTCAGTCACCAAAGGTTCAGGGTCTCCTGAAGACCGCGCGTACCCTGCTTGTAGCAACCTGGGGCGTTTACCCTAT RYVDWFLTVPLLLVELVAVMGLARAVQSSLLKRLVPAAAAMILLGYPGDMHTGLFGLENSVWGLLSTIPFLYIMYVLFIEISKSLKTQSPKVQGLLKTARTLLVATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTACGTTGATTGG------------------------TTCCTAACCGTTCCACTACTACTAGTCGAGCTAGTAGCAGTAATGGGTCTA---------GCC---CGTGCCGTGCAGTCG---TCATTG------------------------------------CTAAAGCGC---CTGGTTCCAGCCGCAGCAGCCATGATTCTGCTTGGTTACCCAGGCGAC---------ATG------------------------------------------------------------------------------CAC---ACTGGT---------CTA---------------------TTCGGCCTAGAAAAC------------------AGCGTATGG---GGTCTACTTTCGACCATTCCATTCCTCTACATCATGTACGTTCTC---------------TTC------ATT---GAGATCAGCAAGAGCCTAAAGACTCAG---------------TCACCAAAGGTT---CAG---GGT---CTC---CTG---AAG---ACCGCG---CGTACCCTGCTTGTAGCA---------------------------------------------------------------ACCTGG---------GGCGTTTACCCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------FLTVPLLLVELVAVMGL---A-RAVQS-SL------------LKR-LVPAAAAMILLGYPGD---M--------------------------H-TG---L-------FGLEN------SVW-GLLSTIPFLYIMYVL-----F--I-EISKSLKTQ-----SPKV-Q-G-L-L-K-TA-RTLLVA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601681 [Actinorhodopsin] clone_1-1_KC601681 gi|523706356|gb|KC601681| Uncultured bacterium clone 1-1 actinorhodopsin gene, partial cds. Uncultured bacterium clone 1-1 actinorhodopsin gene, partial cds. KC601681 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 humic freshwater reservoir other freshwater 48.6158 14.6762 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGGTACGTTGACTGGTTCTTGACCGTGCCACTGCTGCTCGTCGAGTTGGTTGCCGTTCTCGGCCTCGCCCGCTCGATGCAGTCATCGCTGCTCAAGCGCTTGGTTCCTGCTGCCGCACTGATGATCGTGCTCGGCTACCCTGGCGACATGCACACTCAGCTGTTCGGTCTTTCAAACGGCGTCTGGGGAGCACTCTCGACAATTCCGTTCCTCTACATCATGTACGTGCTCTTCGTAGAGATCGGCAAGAGCCTCGGCACTCAGTCGGCAAAGGTACGGGGTCTGCTAAAGGGTGCCCGCCTGCTGCTGATTGCAACCTGGGGCGTCTACCCCAT RYVDWFLTVPLLLVELVAVLGLARSMQSSLLKRLVPAAALMIVLGYPGDMHTQLFGLSNGVWGALSTIPFLYIMYVLFVEIGKSLGTQSAKVRGLLKGARLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTACGTTGACTGG------------------------TTCTTGACCGTGCCACTGCTGCTCGTCGAGTTGGTTGCCGTTCTCGGCCTC---------GCC---CGCTCGATGCAGTCA---TCGCTG------------------------------------CTCAAGCGC---TTGGTTCCTGCTGCCGCACTGATGATCGTGCTCGGCTACCCTGGCGAC---------ATG------------------------------------------------------------------------------CAC---ACTCAG---------CTG---------------------TTCGGTCTTTCAAAC------------------GGCGTCTGG---GGAGCACTCTCGACAATTCCGTTCCTCTACATCATGTACGTGCTC---------------TTC------GTA---GAGATCGGCAAGAGCCTCGGCACTCAG---------------TCGGCAAAGGTA---CGG---GGT---CTG---CTA---AAG---GGTGCC---CGCCTGCTGCTGATTGCA---------------------------------------------------------------ACCTGG---------GGCGTCTACCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------FLTVPLLLVELVAVLGL---A-RSMQS-SL------------LKR-LVPAAALMIVLGYPGD---M--------------------------H-TQ---L-------FGLSN------GVW-GALSTIPFLYIMYVL-----F--V-EIGKSLGTQ-----SAKV-R-G-L-L-K-GA-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663741 [Actinorhodopsin] SCGC_AAA027B06_Actinobacteria_HQ663741 gi|325163082|gb|HQ663741| Actinobacterium SCGC AAA027B06 rhodopsin gene, partial cds Actinobacterium SCGC AAA027B06 rhodopsin gene, partial cds HQ663741 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938428 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Mendota other freshwater 46.0095 -89.7006 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTTGATTGGTTCCTAACCGTTCCACTACTACTAGTTGAGCTAGTTGCAGTTATGGGTCTAGCCAGCGCAATCCAGTCTTCATTGCTAAAGCGTCTGGTTCCAGCCGCAGCCGCAATGATCCTTTTGGGTTACCCAGGCGATGTGAAGCTTGACCTTAACGGTGATGCTGCAGGTCTAGGTCTCGACCCAAGCTGGTGGGGTCTACTATCGACCATCCCATTCCTTTACATCCTTTACGTACTGTTCGTTGAAATCGGCAAGAGCCTTTCATCGCAGTCGGCCAAGGTACAGGGACTACTAAAGGGTGCGCGTTTGCTACTAATCGCTACCTGGGGCGTCTACCCA YVDWFLTVPLLLVELVAVMGLASAIQSSLLKRLVPAAAAMILLGYPGDVKLDLNGDAAGLGLDPSWWGLLSTIPFLYILYVLFVEIGKSLSSQSAKVQGLLKGARLLLIATWGVYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTTGATTGG------------------------TTCCTAACCGTTCCACTACTACTAGTTGAGCTAGTTGCAGTTATGGGTCTA---------GCC---AGCGCAATCCAGTCT---TCATTG------------------------------------CTAAAGCGT---CTGGTTCCAGCCGCAGCCGCAATGATCCTTTTGGGTTACCCAGGCGAT---------GTG------------------------------------------------------------------------------AAG---CTTGAC---------CTTAACGGTGATGCTGCAGGT---CTAGGTCTCGACCCA------------------AGCTGGTGG---GGTCTACTATCGACCATCCCATTCCTTTACATCCTTTACGTACTG---------------TTC------GTT---GAAATCGGCAAGAGCCTTTCATCGCAG---------------TCGGCCAAGGTA---CAG---GGA---CTA---CTA---AAG---GGTGCG---CGTTTGCTACTAATCGCT---------------------------------------------------------------ACCTGG---------GGCGTCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------FLTVPLLLVELVAVMGL---A-SAIQS-SL------------LKR-LVPAAAAMILLGYPGD---V--------------------------K-LD---LNGDAAG-LGLDP------SWW-GLLSTIPFLYILYVL-----F--V-EIGKSLSSQ-----SAKV-Q-G-L-L-K-GA-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663763 [Actinorhodopsin] SCGC_AAA028I02_Actinobacteria_HQ663763 gi|325163125|gb|HQ663763| Actinobacterium SCGC AAA028I02 rhodopsin gene, partial cds Actinobacterium SCGC AAA028I02 rhodopsin gene, partial cds HQ663763 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938455 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Mendota other freshwater 46.0095 -89.7006 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTTGATTGGTTCCTAACTGTTCCACTGCTACTAGTTGAGACCGTTGCCGTTCTTGCTCTAGCTAAGTCACTACAGTCTGCTCTGCTAGTTCGTCTAGTTCCAGCAGCTGCTTTGATGATTGCTTTGGGTTACCCAGGCGACGCAGGTCTAGACATTGGTGGAGTTTCAGCTCCAATTTGGGGTCTACTATCCTCAATTCCATTCGTTTACATCCTGTACGTATTGTTCATTGAGCTTGGTAAGTCTCTTTCCAAGCAGTCCAAGCAGGTTCAGAGAAGAATCAAGGAACTACGCCTTCTTCTTCTTGCTACCTGGGGTGTCTACCCAATGGTCATA YVDWFLTVPLLLVETVAVLALAKSLQSALLVRLVPAAALMIALGYPGDAGLDIGGVSAPIWGLLSSIPFVYILYVLFIELGKSLSKQSKQVQRRIKELRLLLLATWGVYPMVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTTGATTGG------------------------TTCCTAACTGTTCCACTGCTACTAGTTGAGACCGTTGCCGTTCTTGCTCTA---------GCT---AAGTCACTACAGTCT---GCTCTG------------------------------------CTAGTTCGT---CTAGTTCCAGCAGCTGCTTTGATGATTGCTTTGGGTTACCCAGGCGAC---------GCA------------------------------------------------------------------------------GGT---CTAGAC---------ATT---------------------GGTGGAGTTTCAGCT------------------CCAATTTGG---GGTCTACTATCCTCAATTCCATTCGTTTACATCCTGTACGTATTG---------------TTC------ATT---GAGCTTGGTAAGTCTCTTTCCAAGCAG---------------TCCAAGCAGGTT---CAG---AGA---AGA---ATC---AAG---GAACTA---CGCCTTCTTCTTCTTGCT---------------------------------------------------------------ACCTGG---------GGTGTCTACCCAATGGTCATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------FLTVPLLLVETVAVLAL---A-KSLQS-AL------------LVR-LVPAAALMIALGYPGD---A--------------------------G-LD---I-------GGVSA------PIW-GLLSSIPFVYILYVL-----F--I-ELGKSLSKQ-----SKQV-Q-R-R-I-K-EL-RLLLLA---------------------TW---GVYPMVI----------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663771 [Actinorhodopsin] SCGC_AAA028P02_Actinobacteria_HQ663771 gi|325163141|gb|HQ663771| Actinobacterium SCGC AAA028P02 rhodopsin gene, partial cds Actinobacterium SCGC AAA028P02 rhodopsin gene, partial cds HQ663771 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938469 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Mendota other freshwater 46.0095 -89.7006 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTGGATTGGTTCCTAACTGTTCCACTACTACTAGTTGAGACCGTTGCGGTTCTTGCTCTAGCTAAGTCACTACAGTCTGCTCTGCTAGTTCGTCTAGTTCCAGCAGCTGCTTTGATGATTGCTTTGGGTTACCCAGGCGACGCAGGTCTAGACATTGGTGGAGTTTCAGCTCCAATTTGGGGTCTACTATCCTCAATTCCATTCGTCTACATCCTGTACGTATTGTTCATTGAGCTTGGTAAGTCTCTTTCCAAGCAGTCCAAGCAGGTTCAGAGAAGAATCAAGGAACTACGCCTCTCTTCTTCTTGCTACCTGGGGCGTCTACCCGATGGTCAA YVDWFLTVPLLLVETVAVLALAKSLQSALLVRLVPAAALMIALGYPGDAGLDIGGVSAPIWGLLSSIPFVYILYVLFIELGKSLSKQSKQVQRRIKELRLSSSCYLGRLPDGQ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTGGATTGG------------------------TTCCTAACTGTTCCACTACTACTAGTTGAGACCGTTGCGGTTCTTGCTCTA---------GCT---AAGTCACTACAGTCT---GCTCTG------------------------------------CTAGTTCGT---CTAGTTCCAGCAGCTGCTTTGATGATTGCTTTGGGTTACCCAGGCGAC---------GCA------------------------------------------------------------------------------GGT---CTAGAC---------ATT---------------------GGTGGAGTTTCAGCT------------------CCAATTTGG---GGTCTACTATCCTCAATTCCATTCGTCTACATCCTGTACGTATTG---------------TTC------ATT---GAGCTTGGTAAGTCTCTTTCCAAGCAG---------------TCCAAGCAGGTT---CAG---AGA---AGA---ATC---AAG---GAACTA---CGCCTCTCTTCTTCTTGC---------------------------------------------------------------TACCTG---------GGGCGTCTACCCGATGGTCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------FLTVPLLLVETVAVLAL---A-KSLQS-AL------------LVR-LVPAAALMIALGYPGD---A--------------------------G-LD---I-------GGVSA------PIW-GLLSSIPFVYILYVL-----F--I-ELGKSLSKQ-----SKQV-Q-R-R-I-K-EL-RLSSSC---------------------YL---GRLPDGQ----------------------------------------------------------------------------------------------- [Actinorhodopsin]_FJ545217 [Actinorhodopsin] Actinobacterium_MWH-EgelM2-3_H6_actinorhodopsin_gene_partial_cds_FJ545217 gi|224384105|gb|FJ545217| Actinobacterium MWH-EgelM2-3.H6 putative actinorhodopsin gene, partial cds. Actinobacterium MWH-EgelM2-3.H6 putative actinorhodopsin gene, partial cds. FJ545217 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:598499 genomic DNA strain 20-MAY-2009 #na Lake Egelsee other freshwater 47.257 8.817 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTACTAACTGTGCCACTACTACTAGTCGAGACCATTGCGGTTCTTGCTCTAGCTAAGTCAGCTCAGACTGCACTACTAGTTCGCCTAGTACCTGCTGCAGCCCTGATGATTGCACTTGGTTACCCAGGAGACGCTGGCCTAGACATCGGTGGCATCTCTGCTCCAATGTGGGGTCTACTATCAACAATCCCATTCCTTTACATCCTGTACATCTTGTTCGTTGAGCTAGGTAAGAACCTAACCAAGCAGAGCAAGCAGGTTCAGAGAAGACTGAAGGAACTACGCCTTCTTCTTCTAGCTACC LLTVPLLLVETIAVLALAKSAQTALLVRLVPAAALMIALGYPGDAGLDIGGISAPMWGLLSTIPFLYILYILFVELGKNLTKQSKQVQRRLKELRLLLLAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTAACTGTGCCACTACTACTAGTCGAGACCATTGCGGTTCTTGCTCTA---------GCT---AAGTCAGCTCAGACT---GCACTA------------------------------------CTAGTTCGC---CTAGTACCTGCTGCAGCCCTGATGATTGCACTTGGTTACCCAGGAGAC---------GCT------------------------------------------------------------------------------GGC---CTAGAC---------ATC---------------------GGTGGCATCTCTGCT------------------CCAATGTGG---GGTCTACTATCAACAATCCCATTCCTTTACATCCTGTACATCTTG---------------TTC------GTT---GAGCTAGGTAAGAACCTAACCAAGCAG---------------AGCAAGCAGGTT---CAG---AGA---AGA---CTG---AAG---GAACTA---CGCCTTCTTCTTCTAGCT---------------------------------------------------------------ACC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLLVETIAVLAL---A-KSAQT-AL------------LVR-LVPAAALMIALGYPGD---A--------------------------G-LD---I-------GGISA------PMW-GLLSTIPFLYILYIL-----F--V-ELGKNLTKQ-----SKQV-Q-R-R-L-K-EL-RLLLLA---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HF571309 [Actinorhodopsin] clone_BSActR_OTU18_HF571309 gi|528066079|gb|HF571309| Uncultured bacterium partial actR gene for Actinorhodopsin, clone BSActR OTU18. Uncultured bacterium partial actR gene for Actinorhodopsin, clone BSActR OTU18. HF571309 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; na light-energy conversion (ion transport) unknown [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-juil-13 #na brackish water Baltic Sea marine 57.8 20 Distribution of acI-Actinorhodopsin genes in Baltic Sea salinity gradients indicates the success of facultative freshwater photoheterotrophs in brackish waters Salka,I., Wurzbacher,C., Garcia,S.L., Labrenz,M., Juergens,K. and Grossart,H.P. Unpublished #na #na TCACTGCTCGTCCGCCTGGTACCAGCAGCAGCCCTGATGATCGCACTGGGTTACCCAGGAGACTCCGGCATGACCATGGGCCTAGCGCCTTCGGTCTGGGGTCTACTATCGACCATCCCATTCCTATACATCCTCTACGTACTGTTCGTTGAGCTCGGTAAGAGCCTCGAGCGTCAGAGCGAGGCTGTACAGCGCAAGATCAAGGAGCTACGTCTTCTTCTTCTCGCGACCTGGGGCGTCTACCCTATA SLLVRLVPAAALMIALGYPGDSGMTMGLAPSVWGLLSTIPFLYILYVLFVELGKSLERQSEAVQRKIKELRLLLLATWGVYPI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCACTG------------------------------------CTCGTCCGC---CTGGTACCAGCAGCAGCCCTGATGATCGCACTGGGTTACCCAGGAGAC---------TCC------------------------------------------------------------------------------GGC---ATGACC---------ATG------------------------GGCCTAGCGCCT------------------TCGGTCTGG---GGTCTACTATCGACCATCCCATTCCTATACATCCTCTACGTACTG---------------TTC------GTT---GAGCTCGGTAAGAGCCTCGAGCGTCAG---------------AGCGAGGCTGTA---CAG---CGC---AAG---ATC---AAG---GAGCTA---CGTCTTCTTCTTCTCGCG---------------------------------------------------------------ACCTGG---------GGCGTCTACCCTATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SL------------LVR-LVPAAALMIALGYPGD---S--------------------------G-MT---M--------GLAP------SVW-GLLSTIPFLYILYVL-----F--V-ELGKSLERQ-----SEAV-Q-R-K-I-K-EL-RLLLLA---------------------TW---GVYPI------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663777 [Actinorhodopsin] SCGC_AAA041L15_Actinobacteria_HQ663777 gi|325163153|gb|HQ663777| Actinobacterium SCGC AAA041L15 rhodopsin gene, partial cds Actinobacterium SCGC AAA041L15 rhodopsin gene, partial cds HQ663777 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938478 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) GTAGATTGGCTACTAACTGTTCCACTACTACTAGTTGAGCTAGTTGCAGTTCTAGGTCTAGTAAAGGCTGTTCAGTCTTCACTTCTAAAGCGCCTAGTTCCAGCAGCTGCTTTGATGATCATCCTTGGTTACCCAGGTGACATCCACGTACAGTTGTTCGGTCTTTCAAACTCCATGTGGGGTCTACTATCAACAATCCCATTCCTATACATCATGTATGTTCTATGGGTTGAGTTGACCAAGAGCCTTTCAAGCCAGTCAGAAAAGGTACGCAAGATCTTCCAGGGTCTACGTCTTCTTCTAATTGCAACTTGGGGCGTCTACCCTATGGTC VDWLLTVPLLLVELVAVLGLVKAVQSSLLKRLVPAAALMIILGYPGDIHVQLFGLSNSMWGLLSTIPFLYIMYVLWVELTKSLSSQSEKVRKIFQGLRLLLIATWGVYPMV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGATTGG------------------------CTACTAACTGTTCCACTACTACTAGTTGAGCTAGTTGCAGTTCTAGGTCTA---------GTA---AAGGCTGTTCAGTCT---TCACTT------------------------------------CTAAAGCGC---CTAGTTCCAGCAGCTGCTTTGATGATCATCCTTGGTTACCCAGGTGAC---------ATC------------------------------------------------------------------------------CAC---GTACAG---------TTG---------------------TTCGGTCTTTCAAAC------------------TCCATGTGG---GGTCTACTATCAACAATCCCATTCCTATACATCATGTATGTTCTA---------------TGG------GTT---GAGTTGACCAAGAGCCTTTCAAGCCAG---------------TCAGAAAAGGTA---CGC---AAG---ATC---TTC---CAG---GGTCTA---CGTCTTCTTCTAATTGCA---------------------------------------------------------------ACTTGG---------GGCGTCTACCCTATGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------LLTVPLLLVELVAVLGL---V-KAVQS-SL------------LKR-LVPAAALMIILGYPGD---I--------------------------H-VQ---L-------FGLSN------SMW-GLLSTIPFLYIMYVL-----W--V-ELTKSLSSQ-----SEKV-R-K-I-F-Q-GL-RLLLIA---------------------TW---GVYPMV------------------------------------------------------------------------------------------------ [Actinorhodopsin]_HQ663791 [Actinorhodopsin] SCGC_AAA043N04_Actinobacteria_HQ663791 gi|325163180|gb|HQ663791| Actinobacterium SCGC AAA043N04 rhodopsin gene, partial cds Actinobacterium SCGC AAA043N04 rhodopsin gene, partial cds HQ663791 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938503 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTGGATTGGCTACTAACTGTTCCACTACTACTAGTTGAGCTAGTTGCAGTTCTAGGTCTAGTAAAGGCTGTTCAGTCTTCACTTCTAAAGCGCCTAGTTCCAGCAGCTGCTTTGATGATCATCCTTGGTTACCCAGGTGACATCCACGTACAGTTGTTCGGTCTTTCAAACTCCATGTGGGGTCTACTATCAACAATCCCATTCCTATACATCATGTATGTTCTATGGGTTGAGTTGACCAAGAGCCTTTCAAGCCAGTCAGAAAAGGTACGCAAGATCTTCCAAGGTCTACGTCTTCTTCTAATTGCAACTTGGGGCGTCTACCCGATGGTCATA YVDWLLTVPLLLVELVAVLGLVKAVQSSLLKRLVPAAALMIILGYPGDIHVQLFGLSNSMWGLLSTIPFLYIMYVLWVELTKSLSSQSEKVRKIFQGLRLLLIATWGVYPMVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTGGATTGG------------------------CTACTAACTGTTCCACTACTACTAGTTGAGCTAGTTGCAGTTCTAGGTCTA---------GTA---AAGGCTGTTCAGTCT---TCACTT------------------------------------CTAAAGCGC---CTAGTTCCAGCAGCTGCTTTGATGATCATCCTTGGTTACCCAGGTGAC---------ATC------------------------------------------------------------------------------CAC---GTACAG---------TTG---------------------TTCGGTCTTTCAAAC------------------TCCATGTGG---GGTCTACTATCAACAATCCCATTCCTATACATCATGTATGTTCTA---------------TGG------GTT---GAGTTGACCAAGAGCCTTTCAAGCCAG---------------TCAGAAAAGGTA---CGC---AAG---ATC---TTC---CAA---GGTCTA---CGTCTTCTTCTAATTGCA---------------------------------------------------------------ACTTGG---------GGCGTCTACCCGATGGTCATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLLVELVAVLGL---V-KAVQS-SL------------LKR-LVPAAALMIILGYPGD---I--------------------------H-VQ---L-------FGLSN------SMW-GLLSTIPFLYIMYVL-----W--V-ELTKSLSSQ-----SEKV-R-K-I-F-Q-GL-RLLLIA---------------------TW---GVYPMVI----------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663735 [Actinorhodopsin] SCGC_AAA024I17_Actinobacteria_HQ663735 gi|325163070|gb|HQ663735| Actinobacterium SCGC AAA024I17 rhodopsin gene, partial cds Actinobacterium SCGC AAA024I17 rhodopsin gene, partial cds HQ663735 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938423 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Sparkling other freshwater 46.0095 -89.7006 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTAGATTGGCTTCTAACTGTTCCACTACTTCTAGTGGAGCTAGTTGCAGTTCTAGGTCTAGTAAAGGCTATCCAGTCTTCATTGCTAAAGCGCCTAGTTCCAGCAGCAGCCGCGATGATCATCCTTGGTTACCCTGGCGACATCCACGTACAGTTGTTCGGTCTATCGAACTCTATGTGGGGTCTACTATCAACCATCCCATTCCTATACATCATGTATGTACTATGGGTTGAGTTGTCAAAGAGCCTTTCAAGCCAGTCAGAGAAAGTACGCAAGATCTTCCAAGGTCTACGTCTTCTTCTTATTGCAACTTGGGGCGTCTACCCGATGGTCATA YVDWLLTVPLLLVELVAVLGLVKAIQSSLLKRLVPAAAAMIILGYPGDIHVQLFGLSNSMWGLLSTIPFLYIMYVLWVELSKSLSSQSEKVRKIFQGLRLLLIATWGVYPMVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTAGATTGG------------------------CTTCTAACTGTTCCACTACTTCTAGTGGAGCTAGTTGCAGTTCTAGGTCTA---------GTA---AAGGCTATCCAGTCT---TCATTG------------------------------------CTAAAGCGC---CTAGTTCCAGCAGCAGCCGCGATGATCATCCTTGGTTACCCTGGCGAC---------ATC------------------------------------------------------------------------------CAC---GTACAG---------TTG---------------------TTCGGTCTATCGAAC------------------TCTATGTGG---GGTCTACTATCAACCATCCCATTCCTATACATCATGTATGTACTA---------------TGG------GTT---GAGTTGTCAAAGAGCCTTTCAAGCCAG---------------TCAGAGAAAGTA---CGC---AAG---ATC---TTC---CAA---GGTCTA---CGTCTTCTTCTTATTGCA---------------------------------------------------------------ACTTGG---------GGCGTCTACCCGATGGTCATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLLVELVAVLGL---V-KAIQS-SL------------LKR-LVPAAAAMIILGYPGD---I--------------------------H-VQ---L-------FGLSN------SMW-GLLSTIPFLYIMYVL-----W--V-ELSKSLSSQ-----SEKV-R-K-I-F-Q-GL-RLLLIA---------------------TW---GVYPMVI----------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601753 [Actinorhodopsin] clone_9-5_KC601753 gi|523706500|gb|KC601753| Uncultured bacterium clone 9-5 actinorhodopsin gene, partial cds. Uncultured bacterium clone 9-5 actinorhodopsin gene, partial cds. KC601753 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 oligo-mesotrophic deep submontane freshwater lake other freshwater 47.82 13.38 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGGTACATAGATTGGCTACTAACTGTTCCACTACTTCTAGTGGAGCTTGTTGCAGTTCTAGGTCTAGTAAAGGCTATTCAGTCTTCACTTCTAAAGCGTCTAGTTCCTGCAGCTGCAGCGATGATCATCCTTGGTTACCCTGGTGACGCAAAGATTGAACTATTCGGTCTAGGTGCAAGCATGTGGGGTCTACTATCAACAATCCCATTCCTATACATCATGTATGTACTATGGGTTGAGTTGTCAAAGAGCCTGGCAGCGCAGTCAGAGAAGGTCCGCAGCATGTTCCTTGCTCTAAGACTTCTTTTGATCGCTACATGGGGCGTCTATCCCAT RYIDWLLTVPLLLVELVAVLGLVKAIQSSLLKRLVPAAAAMIILGYPGDAKIELFGLGASMWGLLSTIPFLYIMYVLWVELSKSLAAQSEKVRSMFLALRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTACATAGATTGG------------------------CTACTAACTGTTCCACTACTTCTAGTGGAGCTTGTTGCAGTTCTAGGTCTA---------GTA---AAGGCTATTCAGTCT---TCACTT------------------------------------CTAAAGCGT---CTAGTTCCTGCAGCTGCAGCGATGATCATCCTTGGTTACCCTGGTGAC---------GCA------------------------------------------------------------------------------AAG---ATTGAA---------CTA---------------------TTCGGTCTAGGTGCA------------------AGCATGTGG---GGTCTACTATCAACAATCCCATTCCTATACATCATGTATGTACTA---------------TGG------GTT---GAGTTGTCAAAGAGCCTGGCAGCGCAG---------------TCAGAGAAGGTC---CGC---AGC---ATG---TTC---CTT---GCTCTA---AGACTTCTTTTGATCGCT---------------------------------------------------------------ACATGG---------GGCGTCTATCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLLVELVAVLGL---V-KAIQS-SL------------LKR-LVPAAAAMIILGYPGD---A--------------------------K-IE---L-------FGLGA------SMW-GLLSTIPFLYIMYVL-----W--V-ELSKSLAAQ-----SEKV-R-S-M-F-L-AL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601755 [Actinorhodopsin] clone_9-8_KC601755 gi|523706504|gb|KC601755| Uncultured bacterium clone 9-8 actinorhodopsin gene, partial cds. Uncultured bacterium clone 9-8 actinorhodopsin gene, partial cds. KC601755 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 oligo-mesotrophic deep submontane freshwater lake other freshwater 47.82 13.38 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 TACATTGACTGGCTACTAACTGTTCCACTACTTCTAGTGGAGCTTGTTGCAGTTCTAGGTCTAGTAAAGGCTATTCAGTCTTCACTTCTAAAGCGTCTAGTTCCTGCAGCTGCAGCGATGATCATCCTTGGTTGCCCTGGTGACGCAAAGATTGAACTATTCGGTCTAGGCGCAAGCATGTGGGGTCTACTATCAACAATCCCATTCCTATACATCATGTATGTACTATGGGTTGAGTTGTCAAAGAGCCTGGCAGCGCAGTCAGAGAAGGTCCGCAGCATGTTCCTTGCTCTAAGACTTCTTTTGATCGCTACATGGGGCGTATACCCAAT YIDWLLTVPLLLVELVAVLGLVKAIQSSLLKRLVPAAAAMIILGCPGDAKIELFGLGASMWGLLSTIPFLYIMYVLWVELSKSLAAQSEKVRSMFLALRLLLIATWGVYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACATTGACTGG------------------------CTACTAACTGTTCCACTACTTCTAGTGGAGCTTGTTGCAGTTCTAGGTCTA---------GTA---AAGGCTATTCAGTCT---TCACTT------------------------------------CTAAAGCGT---CTAGTTCCTGCAGCTGCAGCGATGATCATCCTTGGTTGCCCTGGTGAC---------GCA------------------------------------------------------------------------------AAG---ATTGAA---------CTA---------------------TTCGGTCTAGGCGCA------------------AGCATGTGG---GGTCTACTATCAACAATCCCATTCCTATACATCATGTATGTACTA---------------TGG------GTT---GAGTTGTCAAAGAGCCTGGCAGCGCAG---------------TCAGAGAAGGTC---CGC---AGC---ATG---TTC---CTT---GCTCTA---AGACTTCTTTTGATCGCT---------------------------------------------------------------ACATGG---------GGCGTATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YIDW--------LLTVPLLLVELVAVLGL---V-KAIQS-SL------------LKR-LVPAAAAMIILGCPGD---A--------------------------K-IE---L-------FGLGA------SMW-GLLSTIPFLYIMYVL-----W--V-ELSKSLAAQ-----SEKV-R-S-M-F-L-AL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663757 [Actinorhodopsin] SCGC_AAA028C14_Actinobacteria_HQ663757 gi|325163113|gb|HQ663757| Actinobacterium SCGC AAA028C14 rhodopsin gene, partial cds Actinobacterium SCGC AAA028C14 rhodopsin gene, partial cds HQ663757 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938446 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Mendota other freshwater 46.0095 -89.7006 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTTGATTGGTTCCTAACTGTTCCACTACTACTAGTAGAGCTAGTTGCAGTTCTAGGTCTTGCAAAGGCTGTTTCATCATCACTACTAAAGCGTCTAGTTCCAGCTGCAGCAGCGATGATCGCTCTTGGTTACCCTGGAGATGCAAAGCTTGACCTGTTGCCAATGGCAGCCGGTGGCTGGGGTGGCGAAGCTGCTGTATGGGGTCTTCTATCAACAATTCCATTCCTATACATCATGTATGTACTATGGTTCGAAATGAAGAAGAGCCTAGACTCACAGTCAGCTAGAGTTCGCAGTCTGTTCCAGACACTACGCGTCCTTCTAATCGCTACCTGGGGCGTCTACCCAATGGTCATA YVDWFLTVPLLLVELVAVLGLAKAVSSSLLKRLVPAAAAMIALGYPGDAKLDLLPMAAGGWGGEAAVWGLLSTIPFLYIMYVLWFEMKKSLDSQSARVRSLFQTLRVLLIATWGVYPMVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTTGATTGG------------------------TTCCTAACTGTTCCACTACTACTAGTAGAGCTAGTTGCAGTTCTAGGTCTT---------GCA---AAGGCTGTTTCATCA---TCACTA------------------------------------CTAAAGCGT---CTAGTTCCAGCTGCAGCAGCGATGATCGCTCTTGGTTACCCTGGAGAT---------GCA------------------------------------------------------------------------------AAG---CTTGAC---------CTGTTGCCAATGGCAGCCGGTGGCTGGGGTGGCGAAGCT------------------GCTGTATGG---GGTCTTCTATCAACAATTCCATTCCTATACATCATGTATGTACTA---------------TGG------TTC---GAAATGAAGAAGAGCCTAGACTCACAG---------------TCAGCTAGAGTT---CGC---AGT---CTG---TTC---CAG---ACACTA---CGCGTCCTTCTAATCGCT---------------------------------------------------------------ACCTGG---------GGCGTCTACCCAATGGTCATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------FLTVPLLLVELVAVLGL---A-KAVSS-SL------------LKR-LVPAAAAMIALGYPGD---A--------------------------K-LD---LLPMAAGGWGGEA------AVW-GLLSTIPFLYIMYVL-----W--F-EMKKSLDSQ-----SARV-R-S-L-F-Q-TL-RVLLIA---------------------TW---GVYPMVI----------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663768 [Actinorhodopsin] SCGC_AAA028K05_Actinobacteria_HQ663768 gi|325163135|gb|HQ663768| Actinobacterium SCGC AAA028K05 rhodopsin gene, partial cds Actinobacterium SCGC AAA028K05 rhodopsin gene, partial cds HQ663768 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938461 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Mendota other freshwater 46.0095 -89.7006 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) GATTGGTTCCTAACTGTTCCACTACTTCTAGTAGAGCTAGTTGCAGTTCTAGGTCTTGCAAAGGCTGTTTCATCATCACTTCTAAAGCGTCTAGTTCCAGCTGCAGCAGCGATGATCATCCTTGGCTACCCTGGCGACGCAGGAATCACAATCTTGGGTATCAAGGGTGAAGGATTTGCTAGCGAGGCAGCTGTTTGGGGTCTTCTATCAACAATCCCATTCCTATACATCATGTACGTCCTATGGATCGAAATGAAGAAGAGCCTAGAGACACAGTCTCCTAGAGTACGCAGTCTGTTCCAGACTCTACGCGTTCTTCTAATCGGCTACATGGGGCGTCTACCCGATGGTCAT DWFLTVPLLLVELVAVLGLAKAVSSSLLKRLVPAAAAMIILGYPGDAGITILGIKGEGFASEAAVWGLLSTIPFLYIMYVLWIEMKKSLETQSPRVRSLFQTLRVLLIGYMGRLPDGH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTGG------------------------TTCCTAACTGTTCCACTACTTCTAGTAGAGCTAGTTGCAGTTCTAGGTCTT---------GCA---AAGGCTGTTTCATCA---TCACTT------------------------------------CTAAAGCGT---CTAGTTCCAGCTGCAGCAGCGATGATCATCCTTGGCTACCCTGGCGAC---------GCA------------------------------------------------------------------------------GGA---ATCACA---------ATCTTGGGTATCAAGGGTGAAGGATTTGCTAGCGAGGCA------------------GCTGTTTGG---GGTCTTCTATCAACAATCCCATTCCTATACATCATGTACGTCCTA---------------TGG------ATC---GAAATGAAGAAGAGCCTAGAGACACAG---------------TCTCCTAGAGTA---CGC---AGT---CTG---TTC---CAG---ACTCTA---CGCGTTCTTCTAATCGGC---------------------------------------------------------------TACATG---------GGGCGTCTACCCGATGGTCAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DW--------FLTVPLLLVELVAVLGL---A-KAVSS-SL------------LKR-LVPAAAAMIILGYPGD---A--------------------------G-IT---ILGIKGEGFASEA------AVW-GLLSTIPFLYIMYVL-----W--I-EMKKSLETQ-----SPRV-R-S-L-F-Q-TL-RVLLIG---------------------YM---GRLPDGH----------------------------------------------------------------------------------------------- [Actinorhodopsin]_FJ545182 [Actinorhodopsin] clone_Erie_LG_D2_rhodopsin_gene_partial_cds_FJ545182 gi|224384039|gb|FJ545182| Uncultured microorganism clone Erie.LG.D2 putative rhodopsin gene, partial cds. Uncultured microorganism clone Erie.LG.D2 putative rhodopsin gene, partial cds. FJ545182 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juil-05 Lake Erie other freshwater 41.9461 -81.6461 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na TTCCTAACTGTTCCACTACTACTAGTTGAGCTTGTAGCTGTTCTAGGTCTAGCAAAGGCTATCCAGTCTTCACTTCTAAAGCGCCTCGTTCCAGCTGCTGCTGCAATGATCGTTCTTGGTTACCCTGGTGACGCAAAGCTTGACCTATTCGGTCTAGAGCCAAGCATGTGGGGTCTACTTTCAACAATTCCGTTCCTATACATCTTGTATGTACTATGGTTCGAATTGAAGAAGAGCCTAGACAGCCAGTCAGCTAAGGTTCGCAGTCTGTTCCAGACACTACGCGTTCTTCTTCTAGCTACC FLTVPLLLVELVAVLGLAKAIQSSLLKRLVPAAAAMIVLGYPGDAKLDLFGLEPSMWGLLSTIPFLYILYVLWFELKKSLDSQSAKVRSLFQTLRVLLLAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCTAACTGTTCCACTACTACTAGTTGAGCTTGTAGCTGTTCTAGGTCTA---------GCA---AAGGCTATCCAGTCT---TCACTT------------------------------------CTAAAGCGC---CTCGTTCCAGCTGCTGCTGCAATGATCGTTCTTGGTTACCCTGGTGAC---------GCA------------------------------------------------------------------------------AAG---CTTGAC---------CTA---------------------TTCGGTCTAGAGCCA------------------AGCATGTGG---GGTCTACTTTCAACAATTCCGTTCCTATACATCTTGTATGTACTA---------------TGG------TTC---GAATTGAAGAAGAGCCTAGACAGCCAG---------------TCAGCTAAGGTT---CGC---AGT---CTG---TTC---CAG---ACACTA---CGCGTTCTTCTTCTAGCT---------------------------------------------------------------ACC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FLTVPLLLVELVAVLGL---A-KAIQS-SL------------LKR-LVPAAAAMIVLGYPGD---A--------------------------K-LD---L-------FGLEP------SMW-GLLSTIPFLYILYVL-----W--F-ELKKSLDSQ-----SAKV-R-S-L-F-Q-TL-RVLLLA---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663767 [Actinorhodopsin] SCGC_AAA028J18_Actinobacteria_HQ663767 gi|325163133|gb|HQ663767| Actinobacterium SCGC AAA028J18 rhodopsin gene, partial cds Actinobacterium SCGC AAA028J18 rhodopsin gene, partial cds HQ663767 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938460 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Mendota other freshwater 46.0095 -89.7006 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTTGATTGGTTCCTAACTGTTCCACTACTACTAGTAGAGCTAGTTGCAGTTCTAGGTCTTGCAAAGGCTGTTCAGTCATCACTTCTAAAGCGTCTAGTCCCTGCAGCTGCAGCGATGATCGCTCTTGGTTACCCAGGTGACGCAAAGATCAACATCATGGACATCGCTCCAAGCGTATGGGGTCTTCTATCAACAATTCCATTCCTATACATCATGTATGTTCTATGGATCGAAATGAAGAAGAGCCTTGCTAGCCAGTCAGAGAAGGTACGTGGTCTATTCCAGACTCTACGTCTTCTTCTTCTAGCTACCTGGGGCGTGTACCCGATG YVDWFLTVPLLLVELVAVLGLAKAVQSSLLKRLVPAAAAMIALGYPGDAKINIMDIAPSVWGLLSTIPFLYIMYVLWIEMKKSLASQSEKVRGLFQTLRLLLLATWGVYPM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTTGATTGG------------------------TTCCTAACTGTTCCACTACTACTAGTAGAGCTAGTTGCAGTTCTAGGTCTT---------GCA---AAGGCTGTTCAGTCA---TCACTT------------------------------------CTAAAGCGT---CTAGTCCCTGCAGCTGCAGCGATGATCGCTCTTGGTTACCCAGGTGAC---------GCA------------------------------------------------------------------------------AAG---ATCAAC---------ATC---------------------ATGGACATCGCTCCA------------------AGCGTATGG---GGTCTTCTATCAACAATTCCATTCCTATACATCATGTATGTTCTA---------------TGG------ATC---GAAATGAAGAAGAGCCTTGCTAGCCAG---------------TCAGAGAAGGTA---CGT---GGT---CTA---TTC---CAG---ACTCTA---CGTCTTCTTCTTCTAGCT---------------------------------------------------------------ACCTGG---------GGCGTGTACCCGATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------FLTVPLLLVELVAVLGL---A-KAVQS-SL------------LKR-LVPAAAAMIALGYPGD---A--------------------------K-IN---I-------MDIAP------SVW-GLLSTIPFLYIMYVL-----W--I-EMKKSLASQ-----SEKV-R-G-L-F-Q-TL-RLLLLA---------------------TW---GVYPM------------------------------------------------------------------------------------------------- [Actinorhodopsin]_FJ545215 [Actinorhodopsin] Candidatus_Aquiluna_rubra_strain_MWH-BeijW16_actinorhodopsin_gene_partial_cds_FJ545215 gi|224384101|gb|FJ545215| Candidatus Aquiluna rubra strain MWH-BeijW16 putative actinorhodopsin gene, partial cds. Candidatus Aquiluna rubra strain MWH-BeijW16 putative actinorhodopsin gene, partial cds. FJ545215 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria/Actinobacteridae/Actinomycetales/Micrococcineae/Microbacteriaceae/Candidatus Aquiluna] taxon:529882 genomic DNA strain 20-MAY-2009 #na pond China Sea freshwater -6.821342 39.279531 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na TTCCTAACCGTTCCACTACTACTGCTAGAGACCGTTGCCGTTTTGGCACTGGCTGCAGCAGTACAGCGCAACCTACTAATGAAGCTAGTTCCTGCAGCAGCTTTGATGATCGGTCTTGGTTACCCAGGAGACGCTCAGCTAAACCTGCTTTACCAGGGCGACGCTTCACTGTGGGGTCTACTATCGACCATCCCATTCCTATACATCCTGTACGTACTGTTCGTTGAGCTAGGCAAGTCCCTAGAGCGTCAGTCCGCAGCTGTACAGCGCAAGATCAAGGAGCTACGTCTTCTACTCTTGGCTACC FLTVPLLLLETVAVLALAAAVQRNLLMKLVPAAALMIGLGYPGDAQLNLLYQGDASLWGLLSTIPFLYILYVLFVELGKSLERQSAAVQRKIKELRLLLLAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCTAACCGTTCCACTACTACTGCTAGAGACCGTTGCCGTTTTGGCACTG---------GCT---GCAGCAGTACAGCGC---AACCTA------------------------------------CTAATGAAG---CTAGTTCCTGCAGCAGCTTTGATGATCGGTCTTGGTTACCCAGGAGAC---------GCT------------------------------------------------------------------------------CAG---CTAAAC---------CTGCTT------------------TACCAGGGCGACGCT------------------TCACTGTGG---GGTCTACTATCGACCATCCCATTCCTATACATCCTGTACGTACTG---------------TTC------GTT---GAGCTAGGCAAGTCCCTAGAGCGTCAG---------------TCCGCAGCTGTA---CAG---CGC---AAG---ATC---AAG---GAGCTA---CGTCTTCTACTCTTGGCT---------------------------------------------------------------ACC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FLTVPLLLLETVAVLAL---A-AAVQR-NL------------LMK-LVPAAALMIGLGYPGD---A--------------------------Q-LN---LL------YQGDA------SLW-GLLSTIPFLYILYVL-----F--V-ELGKSLERQ-----SAAV-Q-R-K-I-K-EL-RLLLLA---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_FJ545220 [Actinorhodopsin] Candidatus_Aquiluna_rubra_strain_MWH-Dar4_actinorhodopsin_gene_complete_cds_FJ545220 gi|224384111|gb|FJ545220| Candidatus Aquiluna rubra strain MWH-Dar4 putative actinorhodopsin gene, complete cds. Candidatus Aquiluna rubra strain MWH-Dar4 putative actinorhodopsin gene, complete cds. FJ545220 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria/Actinobacteridae/Actinomycetales/Micrococcineae/Microbacteriaceae/Candidatus Aquiluna] taxon:529882 genomic DNA strain 20-MAY-2009 #na pond other freshwater -6.821342 39.279531 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na ATGAGCAATGGGTCGTACACCCTTGTTTACAACATGCTCTCTCTTGGTATTGCGAGCATGCTATTCACCTCCATTTTCTTGTTCGTAGCCCGTGAGCGCGTTGCACCTCGTTACCGCATGGCCGTTATGGTCTCCGGTACCGTAACCGCAATCGCTGCTTACCACTACTTCAGAATGTTCGACGACTTCAAGCACGCCTTCGGTACCGATGGCATGGGTGTAGTTGCTTACAACGTTGGCTACCGCTACGTGGACTGGTTCCTAACTGTTCCACTGCTACTGGTTGAGACTGTTGCCGTATTGGCACTGGCAGCTACCGTACAGCGCAGCCTGCTAAACAAGCTGGTTCCTGCAGCTGCAGCGATGATCGCTCTGGGTTATCCAGGTGACGCTCAGCTGAACCTGCTTTACCAGGGTGACGCACCGCTATGGGGCCTACTATCCACCATCCCATTCCTATACATCCTTTACGTACTATTCGTAGAGCTAGGTAAGGGTCTTGCTGGTCAGTCCGAGGCTGTACAGCGCAAGATCAAGGAGCTACGTCTTCTTCTTCTCGCAACCTGGGGCGTTTACCCAATCTCGTTCATCTTCAACATGAACGCAACTGGATTTGACGAGGGCGGCTTCGTGCTTCGTGAGACCGGTTACACCATTGCTGACATCTTGGCCAAGTGTCTATTCGGCCTAGTGATCTTCACCATCGCTCGTATCAAGAGCGCTGAGGACGACGCTGAGTTCGCAAAGACCGAGTTCAAGAAGTAA MSNGSYTLVYNMLSLGIASMLFTSIFLFVARERVAPRYRMAVMVSGTVTAIAAYHYFRMFDDFKHAFGTDGMGVVAYNVGYRYVDWFLTVPLLLVETVAVLALAATVQRSLLNKLVPAAAAMIALGYPGDAQLNLLYQGDAPLWGLLSTIPFLYILYVLFVELGKGLAGQSEAVQRKIKELRLLLLATWGVYPISFIFNMNATGFDEGGFVLRETGYTIADILAKCLFGLVIFTIARIKSAEDDAEFAKTEFKK* ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAGCAATGGGTCGTACACCCTTGTTTACAACATGCTCTCTCTTGGTATTGCGAGCATGCTATTCACCTCCATTTTCTTGTTCGTAGCCCGTGAGCGCGTTGCACCTCGTTACCGCATGGCCGTTATGGTCTCCGGTACCGTAACCGCAATCGCTGCTTACCACTACTTCAGAATGTTCGACGACTTCAAGCACGCCTTCGGT---------ACCGATGGCATGGGT------------------GTAGTTGCTTACAACGTTGGCTACCGCTACGTGGACTGG------------------------TTCCTAACTGTTCCACTGCTACTGGTTGAGACTGTTGCCGTATTGGCACTG---------GCA---GCTACCGTACAGCGC---AGCCTG------------------------------------CTAAACAAG---CTGGTTCCTGCAGCTGCAGCGATGATCGCTCTGGGTTATCCAGGTGAC---------GCT------------------------------------------------------------------------------CAG---CTGAAC---------CTGCTT------------------TACCAGGGTGACGCA------------------CCGCTATGG---GGCCTACTATCCACCATCCCATTCCTATACATCCTTTACGTACTA---------------TTC------GTA---GAGCTAGGTAAGGGTCTTGCTGGTCAG---------------TCCGAGGCTGTA---CAG---CGC---AAG---ATC---AAG---GAGCTA---CGTCTTCTTCTTCTCGCA---------------------------------------------------------------ACCTGG---------GGCGTTTACCCAATCTCGTTCATCTTCAACATGAACGCA------------ACTGGATTTGACGAGGGCGGCTTCGTGCTTCGTGAGACCGGTTACACCATTGCTGACATCTTGGCCAAGTGTCTATTCGGCCTAGTGATCTTCACCATCGCTCGTATCAAGAGCGCTGAGGACGACGCTGAGTTCGCAAAGACCGAGTTCAAGAAG--------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------MSNGSYTLVYNMLSLGIASMLFTSIFLFVARERVAPRYRMAVMVSGTVTAIAAYHYFRMFDDFKHAFG---TDGMG------VVAYNVGYRYVDW--------FLTVPLLLVETVAVLAL---A-ATVQR-SL------------LNK-LVPAAAAMIALGYPGD---A--------------------------Q-LN---LL------YQGDA------PLW-GLLSTIPFLYILYVL-----F--V-ELGKGLAGQ-----SEAV-Q-R-K-I-K-EL-RLLLLA---------------------TW---GVYPISFIFNMNA----TGFDEGGFVLRETGYTIADILAKCLFGLVIFTIARIKSAEDDAEFAKTEFKK--------------------------------- [Actinorhodopsin]_HF571298 [Actinorhodopsin] clone_BSActR_OTU6_HF571298 gi|528066057|gb|HF571298| Uncultured bacterium partial actR gene for Actinorhodopsin, clone BSActR OTU6. Uncultured bacterium partial actR gene for Actinorhodopsin, clone BSActR OTU6. HF571298 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-juil-13 #na brackish water Baltic Sea marine 57.8 20 Distribution of acI-Actinorhodopsin genes in Baltic Sea salinity gradients indicates the success of facultative freshwater photoheterotrophs in brackish waters Salka,I., Wurzbacher,C., Garcia,S.L., Labrenz,M., Juergens,K. and Grossart,H.P. Unpublished #na #na TACCGTTATGTTGATTGGTTCCTAACAGTTCCACTTCTACTGGTTGAGACCGTTGCCGTATTGGCTTTGGCTCGCGCTGTCCAGACCAAGATGTTGGTAAGGCTTGTTCCTGCAGCCGCGCTAATGATCGGCCTTGGCTACCCAGGAGATGCACAGCTAAACGTGTTCTACGACGGCGATGCATCACTATGGGGCCTACTTTCAACCATCCCATTCCTTTACATCCTTTACGTACTGTTCGTCGAGCTTGGCAAGAGCCTTGACCGTCAGCCAGCCGGAGTTGTAAGGAAGATCAAGGAACTACGTCTCCTTCTTCTTGCAACCTGGGGTGTTTACCCGATA YRYVDWFLTVPLLLVETVAVLALARAVQTKMLVRLVPAAALMIGLGYPGDAQLNVFYDGDASLWGLLSTIPFLYILYVLFVELGKSLDRQPAGVVRKIKELRLLLLATWGVYPI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCGTTATGTTGATTGG------------------------TTCCTAACAGTTCCACTTCTACTGGTTGAGACCGTTGCCGTATTGGCTTTG---------GCT---CGCGCTGTCCAGACC---AAGATG------------------------------------TTGGTAAGG---CTTGTTCCTGCAGCCGCGCTAATGATCGGCCTTGGCTACCCAGGAGAT---------GCA------------------------------------------------------------------------------CAG---CTAAAC---------GTGTTC------------------TACGACGGCGATGCA------------------TCACTATGG---GGCCTACTTTCAACCATCCCATTCCTTTACATCCTTTACGTACTG---------------TTC------GTC---GAGCTTGGCAAGAGCCTTGACCGTCAG---------------CCAGCCGGAGTT---GTA---AGG---AAG---ATC---AAG---GAACTA---CGTCTCCTTCTTCTTGCA---------------------------------------------------------------ACCTGG---------GGTGTTTACCCGATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYVDW--------FLTVPLLLVETVAVLAL---A-RAVQT-KM------------LVR-LVPAAALMIGLGYPGD---A--------------------------Q-LN---VF------YDGDA------SLW-GLLSTIPFLYILYVL-----F--V-ELGKSLDRQ-----PAGV-V-R-K-I-K-EL-RLLLLA---------------------TW---GVYPI------------------------------------------------------------------------------------------------- [Actinorhodopsin]_FJ545219 [Actinorhodopsin] Candidatus_Rhodoluna_planktonica_strain_MWH-Dar1_actinorhodopsin_gene_complete_cds_FJ545219 gi|224384109|gb|FJ545219| Candidatus Rhodoluna planktonica strain MWH-Dar1 putative actinorhodopsin gene, complete cds. Candidatus Rhodoluna planktonica strain MWH-Dar1 putative actinorhodopsin gene, complete cds. FJ545219 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria/Actinobacteridae/Actinomycetales/Micrococcineae/Microbacteriaceae/Candidatus Rhodoluna] taxon:535712 genomic DNA strain 20-MAY-2009 #na pond other freshwater 31.263616 120.205333 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na ATGAATTCTCTTTCGTCCATCTTGGACAACAACCAGTTCAACCATGTTTACAACATCCTCTCCTTGGGTATTGCAAGCATGGTTTTCACCTCAATCTTCTTGTTCGTTGCCCGCGAGCGAGTTGCACCTCGTTACCGCATGGCGGTAATGATTTCGGGCACAGTTACCGCAATCGCCGCCTACCACTACTTCAGAATGTTTGACTCGTTCAACCACGCATTCGCCGGCGCCGAAGGTAACCCAGACCTATACAACGTTGGCTACCGCTACGTTGACTGGTTCCTCACAGTGCCACTGCTATTGGTTGAGACCGTCGCCGTTTTGGCTTTGGCACGCGCAGCCCAGCGTTCAATGTTGAACCGCTTGGTTCCAGCAGCTGCAGCCATGATTGCACTTGGTTACCCAGGTGACGCAAAGCTAGACATCTTTGGCATTGCACCTTCGGTTTGGGGTCTACTTTCGACCTTGCCATTCCTTTACATCCTTTACGTGCTGTTCATCGAGCTTGGCAAGAGCCTTGAGCGTCAGTCAGCAGAGGTTCGCAAGAAGATCTCGACTCTACGTCTAGTGCTTCTAGCAACCTGGGGTGTCTACCCAATCTCGTTCATCTTCAACATGAACTCAACCGGATTCGACCCAGCAGGTTTCGTCGCTCGCGAAGTTGGTTACAGCATCGCCGACATCCTTGCTAAGTGTCTATTCGGTCTAATCATCTTCTCGATCGCACGTATCAAGTCGGCCGAAGATGACGCAGAATTCGCTAAGAACGAGTTCCGCGACTAA MNSLSSILDNNQFNHVYNILSLGIASMVFTSIFLFVARERVAPRYRMAVMISGTVTAIAAYHYFRMFDSFNHAFAGAEGNPDLYNVGYRYVDWFLTVPLLLVETVAVLALARAAQRSMLNRLVPAAAAMIALGYPGDAKLDIFGIAPSVWGLLSTLPFLYILYVLFIELGKSLERQSAEVRKKISTLRLVLLATWGVYPISFIFNMNSTGFDPAGFVAREVGYSIADILAKCLFGLIIFSIARIKSAEDDAEFAKNEFRD* ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAATTCTCTTTCGTCCATCTTGGACAACAACCAGTTCAACCATGTTTACAACATCCTCTCCTTGGGTATTGCAAGCATGGTTTTCACCTCAATCTTCTTGTTCGTTGCCCGCGAGCGAGTTGCACCTCGTTACCGCATGGCGGTAATGATTTCGGGCACAGTTACCGCAATCGCCGCCTACCACTACTTCAGAATGTTTGACTCGTTCAACCACGCATTCGCC---------------------------GGCGCCGAAGGTAACCCAGACCTATACAACGTTGGCTACCGCTACGTTGACTGG------------------------TTCCTCACAGTGCCACTGCTATTGGTTGAGACCGTCGCCGTTTTGGCTTTG---------GCA---CGCGCAGCCCAGCGT---TCAATG------------------------------------TTGAACCGC---TTGGTTCCAGCAGCTGCAGCCATGATTGCACTTGGTTACCCAGGTGAC---------GCA------------------------------------------------------------------------------AAG---CTAGAC---------ATC---------------------TTTGGCATTGCACCT------------------TCGGTTTGG---GGTCTACTTTCGACCTTGCCATTCCTTTACATCCTTTACGTGCTG---------------TTC------ATC---GAGCTTGGCAAGAGCCTTGAGCGTCAG---------------TCAGCAGAGGTT---CGC---AAG---AAG---ATC---TCG---ACTCTA---CGTCTAGTGCTTCTAGCA---------------------------------------------------------------ACCTGG---------GGTGTCTACCCAATCTCGTTCATCTTCAACATGAACTCA------------ACCGGATTCGACCCAGCAGGTTTCGTCGCTCGCGAAGTTGGTTACAGCATCGCCGACATCCTTGCTAAGTGTCTATTCGGTCTAATCATCTTCTCGATCGCACGTATCAAGTCGGCCGAAGATGACGCAGAATTCGCTAAGAACGAGTTCCGCGAC--------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------MNSLSSILDNNQFNHVYNILSLGIASMVFTSIFLFVARERVAPRYRMAVMISGTVTAIAAYHYFRMFDSFNHAFA---------GAEGNPDLYNVGYRYVDW--------FLTVPLLLVETVAVLAL---A-RAAQR-SM------------LNR-LVPAAAAMIALGYPGD---A--------------------------K-LD---I-------FGIAP------SVW-GLLSTLPFLYILYVL-----F--I-ELGKSLERQ-----SAEV-R-K-K-I-S-TL-RLVLLA---------------------TW---GVYPISFIFNMNS----TGFDPAGFVAREVGYSIADILAKCLFGLIIFSIARIKSAEDDAEFAKNEFRD--------------------------------- [Actinorhodopsin]_FJ545218 [Actinorhodopsin] Actinobacterium_MWH-Uga1_actinorhodopsin_gene_complete_cds_FJ545218 gi|224384107|gb|FJ545218| Actinobacterium MWH-Uga1 putative actinorhodopsin gene, complete cds. Actinobacterium MWH-Uga1 putative actinorhodopsin gene, complete cds. FJ545218 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:286190 genomic DNA strain 20-MAY-2009 #na pond other freshwater 0.42 33.2 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na ATGAATAATCTGTCCGACCTGTTGACTGATAGCCAGTTCAACATTGTCTCCAACATGCTCTCGCTGGGTATTGCCAGCATGTTGTTCACTACGTTCTTCCTGGTATTAGCCAGAGATCGTGTGCTCCCGCGTTATCGACTCGCAGTCCTCATCTCTGCAACAGTGACAGGCATTGCGGCCTACCACTACTTCAGAATGTTTGACTCGTTCAACCACGCATTCTCTACTCTTGACGGAGCAGTGAACAATGCTGCTATCTACAACGTGGGATACCGCTACGTAGACTGGCTGCTCACCGTTCCACTGCTGCTGATGGAAATCGTTGCCGTACTCGCATTGACCAGACAGCTCCAAAGCTCTCTGCTCAAGCGTTTGGTACCAGCAGCGGCCCTGATGATTATTTTGGGTTACCCCGGAGATGCCAAGCTCGACATTTGGGGCATTGCTCCCTCAGTCTGGGGTCTGCTTTCCACCATCCCCTTCCTCTACATCCTCTACGTGCTCTTCATTGAGCTCAGCAAGAGCCTGGTTCGCCAGTCTCCCGGAGTTCAAAAGAAGATCAAGCAGCTTCGTCTCTTGCTGATCGCAACCTGGGGCGTTTACCCCATCGCCTTCATCTTTGCGATGAACAGCGATGGCTTCGTAGCTGACCAGTTTGTTGCACGCGAGGTCGGTTACACCATCGCCGACATTCTGGCGAAGTGTTTGTTCGGTCTGCTCATCTTCTCGATCGCTCGCATGAAGTCCGCTGAGGACGATGCAGAGTTCGCAAAGACTGAGTTCCGCGACTAA MNNLSDLLTDSQFNIVSNMLSLGIASMLFTTFFLVLARDRVLPRYRLAVLISATVTGIAAYHYFRMFDSFNHAFSTLDGAVNNAAIYNVGYRYVDWLLTVPLLLMEIVAVLALTRQLQSSLLKRLVPAAALMIILGYPGDAKLDIWGIAPSVWGLLSTIPFLYILYVLFIELSKSLVRQSPGVQKKIKQLRLLLIATWGVYPIAFIFAMNSDGFVADQFVAREVGYTIADILAKCLFGLLIFSIARMKSAEDDAEFAKTEFRD* ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAATAATCTGTCCGACCTGTTGACTGATAGCCAGTTCAACATTGTCTCCAACATGCTCTCGCTGGGTATTGCCAGCATGTTGTTCACTACGTTCTTCCTGGTATTAGCCAGAGATCGTGTGCTCCCGCGTTATCGACTCGCAGTCCTCATCTCTGCAACAGTGACAGGCATTGCGGCCTACCACTACTTCAGAATGTTTGACTCGTTCAACCACGCATTCTCT------------------ACTCTTGACGGAGCAGTGAACAATGCTGCTATCTACAACGTGGGATACCGCTACGTAGACTGG------------------------CTGCTCACCGTTCCACTGCTGCTGATGGAAATCGTTGCCGTACTCGCATTG---------ACC---AGACAGCTCCAAAGC---TCTCTG------------------------------------CTCAAGCGT---TTGGTACCAGCAGCGGCCCTGATGATTATTTTGGGTTACCCCGGAGAT---------GCC------------------------------------------------------------------------------AAG---CTCGAC---------ATT---------------------TGGGGCATTGCTCCC------------------TCAGTCTGG---GGTCTGCTTTCCACCATCCCCTTCCTCTACATCCTCTACGTGCTC---------------TTC------ATT---GAGCTCAGCAAGAGCCTGGTTCGCCAG---------------TCTCCCGGAGTT---CAA---AAG---AAG---ATC---AAG---CAGCTT---CGTCTCTTGCTGATCGCA---------------------------------------------------------------ACCTGG---------GGCGTTTACCCCATCGCCTTCATCTTTGCGATGAACAGC------------GATGGCTTCGTAGCTGACCAGTTTGTTGCACGCGAGGTCGGTTACACCATCGCCGACATTCTGGCGAAGTGTTTGTTCGGTCTGCTCATCTTCTCGATCGCTCGCATGAAGTCCGCTGAGGACGATGCAGAGTTCGCAAAGACTGAGTTCCGCGAC--------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------MNNLSDLLTDSQFNIVSNMLSLGIASMLFTTFFLVLARDRVLPRYRLAVLISATVTGIAAYHYFRMFDSFNHAFS------TLDGAVNNAAIYNVGYRYVDW--------LLTVPLLLMEIVAVLAL---T-RQLQS-SL------------LKR-LVPAAALMIILGYPGD---A--------------------------K-LD---I-------WGIAP------SVW-GLLSTIPFLYILYVL-----F--I-ELSKSLVRQ-----SPGV-Q-K-K-I-K-QL-RLLLIA---------------------TW---GVYPIAFIFAMNS----DGFVADQFVAREVGYTIADILAKCLFGLLIFSIARMKSAEDDAEFAKTEFRD--------------------------------- [Actinorhodopsin]_FJ545221 [Actinorhodopsin] Candidatus_Rhodoluna_lacicola_strain_MWH-Ta8_actinorhodopsin_gene_complete_cds_FJ545221 gi|224384113|gb|FJ545221| Candidatus Rhodoluna lacicola strain MWH-Ta8 putative actinorhodopsin gene, complete cds. Candidatus Rhodoluna lacicola strain MWH-Ta8 putative actinorhodopsin gene, complete cds. FJ545221 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria/Actinobacteridae/Actinomycetales/Micrococcineae/Microbacteriaceae/Candidatus Rhodoluna] taxon:529884 genomic DNA strain 20-MAY-2009 #na Lake Taihu China Sea freshwater 31.25 120.26 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na ATGAACACATTGTCTAATGCATTAGACAACGGCCAATTTAACTTGGTCTACAACATTTTGTCGCTGGGAATAGCATCGATGCTATTTACAGCGATTTTCCTATTTGTGGCTCGCGAGCGCGTATTGCCTCGTTACCGCATTGCAGTGATGGTTTCAGCGACAGTAACCGCTATCGCCGCGTACCACTACTTCCGTATGTTCGACAACTTCAGCCACGCATTTGCTGGAGCAGAAAACAATCCAGACGCATACAACGTTGGATACCGCTACGTTGACTGGCTACTAACAGTGCCATTGCTATTGGTTGAATTGGTTGCAGTACTTGCACTTGCTAAGGCAGCCCAGAGCTCAATCTTGAACCGCTTGGTTCCTGCAGCAGCAGCAATGATTGTTCTTGGTTACCCTGGTGACGCAAAGCTAGACATCTGGGGCATCGCGCCATCAGTATGGGGCTTGCTATCAACCATTCCTTTCCTATACATCCTGTACGTACTATTCATTGAGCTTGGCAAGAGCTTGTCTCGCCAGTCAGAGGCAGTACAGAAGAAGGTAAAGATTCTGCGCCTATTGCTAATTGCAACCTGGGGCGTTTACCCAATCACCTTCATCTTGGCAATGGGTACCCCTCCGGGTGCACCGTTCAACGCCAGTGAGTTTGTAGCTCGTGAAGTTGGATATAGCATTGCTGACATCCTGGCCAAGTGTCTATTTGGTCTGATCATCTACAGCATCGCTCGTATCAAGTCAGCTGAAGATGACAAGGAATTCGCAAAGGCAGAGTTCAAAGACGCCTAA MNTLSNALDNGQFNLVYNILSLGIASMLFTAIFLFVARERVLPRYRIAVMVSATVTAIAAYHYFRMFDNFSHAFAGAENNPDAYNVGYRYVDWLLTVPLLLVELVAVLALAKAAQSSILNRLVPAAAAMIVLGYPGDAKLDIWGIAPSVWGLLSTIPFLYILYVLFIELGKSLSRQSEAVQKKVKILRLLLIATWGVYPITFILAMGTPPGAPFNASEFVAREVGYSIADILAKCLFGLIIYSIARIKSAEDDKEFAKAEFKDA* ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAACACATTGTCTAATGCATTAGACAACGGCCAATTTAACTTGGTCTACAACATTTTGTCGCTGGGAATAGCATCGATGCTATTTACAGCGATTTTCCTATTTGTGGCTCGCGAGCGCGTATTGCCTCGTTACCGCATTGCAGTGATGGTTTCAGCGACAGTAACCGCTATCGCCGCGTACCACTACTTCCGTATGTTCGACAACTTCAGCCACGCATTTGCT---------------------------GGAGCAGAAAACAATCCAGACGCATACAACGTTGGATACCGCTACGTTGACTGG------------------------CTACTAACAGTGCCATTGCTATTGGTTGAATTGGTTGCAGTACTTGCACTT---------GCT---AAGGCAGCCCAGAGC---TCAATC------------------------------------TTGAACCGC---TTGGTTCCTGCAGCAGCAGCAATGATTGTTCTTGGTTACCCTGGTGAC---------GCA------------------------------------------------------------------------------AAG---CTAGAC---------ATC---------------------TGGGGCATCGCGCCA------------------TCAGTATGG---GGCTTGCTATCAACCATTCCTTTCCTATACATCCTGTACGTACTA---------------TTC------ATT---GAGCTTGGCAAGAGCTTGTCTCGCCAG---------------TCAGAGGCAGTA---CAG---AAG---AAG---GTA---AAG---ATTCTG---CGCCTATTGCTAATTGCA---------------------------------------------------------------ACCTGG---------GGCGTTTACCCAATCACCTTCATCTTGGCAATGGGTACCCCTCCGGGT---GCACCGTTCAACGCCAGTGAGTTTGTAGCTCGTGAAGTTGGATATAGCATTGCTGACATCCTGGCCAAGTGTCTATTTGGTCTGATCATCTACAGCATCGCTCGTATCAAGTCAGCTGAAGATGACAAGGAATTCGCAAAGGCAGAGTTCAAAGACGCC------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------------------------MNTLSNALDNGQFNLVYNILSLGIASMLFTAIFLFVARERVLPRYRIAVMVSATVTAIAAYHYFRMFDNFSHAFA---------GAENNPDAYNVGYRYVDW--------LLTVPLLLVELVAVLAL---A-KAAQS-SI------------LNR-LVPAAAAMIVLGYPGD---A--------------------------K-LD---I-------WGIAP------SVW-GLLSTIPFLYILYVL-----F--I-ELGKSLSRQ-----SEAV-Q-K-K-V-K-IL-RLLLIA---------------------TW---GVYPITFILAMGTPPG-APFNASEFVAREVGYSIADILAKCLFGLIIYSIARIKSAEDDKEFAKAEFKDA-------------------------------- [Actinorhodopsin]_FJ545213 [Actinorhodopsin] Candidatus_Rhodoluna_lacicola_strain_MWH-YangW7_actinorhodopsin_gene_partial_cds_FJ545213 gi|224384097|gb|FJ545213| Candidatus Rhodoluna lacicola strain MWH-YangW7 putative actinorhodopsin gene, partial cds. Candidatus Rhodoluna lacicola strain MWH-YangW7 putative actinorhodopsin gene, partial cds. FJ545213 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria/Actinobacteridae/Actinomycetales/Micrococcineae/Microbacteriaceae/Candidatus Rhodoluna] taxon:529884 genomic DNA strain 20-MAY-2009 #na Yangtze River China Sea freshwater 31.263616 120.205333 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTACTAACCGTTCCATTGCTATTGGTTGAATTGGTTGCAGTACTTGCACTTGCAAAGGCAGCCCAGAGCTCAATCTTGAACCGCTTGGTTCCTGCAGCAGCAGCAATGATTGTTCTTGGTTACCCTGGCGACGCAAAGCTAGACATCTGGGGCATCGCGCCATCAGTATGGGGCTTGCTATCAACCATTCCTTTCCTATACATCCTGTACGTACTATTCATTGAGCTTGGCAAGAGCTTGTCTCGCCAGTCAGAGGCAGTACAGAAGAAGGTAAAGATTCTGCGCCTATTGCTAATTGCAACC LLTVPLLLVELVAVLALAKAAQSSILNRLVPAAAAMIVLGYPGDAKLDIWGIAPSVWGLLSTIPFLYILYVLFIELGKSLSRQSEAVQKKVKILRLLLIAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTAACCGTTCCATTGCTATTGGTTGAATTGGTTGCAGTACTTGCACTT---------GCA---AAGGCAGCCCAGAGC---TCAATC------------------------------------TTGAACCGC---TTGGTTCCTGCAGCAGCAGCAATGATTGTTCTTGGTTACCCTGGCGAC---------GCA------------------------------------------------------------------------------AAG---CTAGAC---------ATC---------------------TGGGGCATCGCGCCA------------------TCAGTATGG---GGCTTGCTATCAACCATTCCTTTCCTATACATCCTGTACGTACTA---------------TTC------ATT---GAGCTTGGCAAGAGCTTGTCTCGCCAG---------------TCAGAGGCAGTA---CAG---AAG---AAG---GTA---AAG---ATTCTG---CGCCTATTGCTAATTGCA---------------------------------------------------------------ACC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLLVELVAVLAL---A-KAAQS-SI------------LNR-LVPAAAAMIVLGYPGD---A--------------------------K-LD---I-------WGIAP------SVW-GLLSTIPFLYILYVL-----F--I-ELGKSLSRQ-----SEAV-Q-K-K-V-K-IL-RLLLIA---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_FJ545214 [Actinorhodopsin] Candidatus_Rhodoluna_lacicola_strain_MWH-SuzW20_actinorhodopsin_gene_partial_cds_FJ545214 gi|224384099|gb|FJ545214| Candidatus Rhodoluna lacicola strain MWH-SuzW20 putative actinorhodopsin gene, partial cds. Candidatus Rhodoluna lacicola strain MWH-SuzW20 putative actinorhodopsin gene, partial cds. FJ545214 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria/Actinobacteridae/Actinomycetales/Micrococcineae/Microbacteriaceae/Candidatus Rhodoluna] taxon:529884 genomic DNA strain 20-MAY-2009 #na pond China Sea freshwater 31.263616 120.205333 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTACTAACAGTGCCATTGCTATTGGTTGAGCTGGTTGCAGTTCTTGCACTTGCAAAGGCCGCGCAGAGCTCAATCTTGAACCGCTTGGTTCCTGCAGCTGCAGCCATGATCGTGCTTGGTTACCCGGGCGATGCAAAGCTAGACCTATGGGGTATTGGTGCCTCATGGTGGGGACTGTTCTCAACCATCCCATTCCTATACATCCTGTACGTGCTGTTCATTGAACTTGGCAAGAGCTTGACCCGCCAGTCAGAAGCAGTGCAGAAGAAGGTAAAGCTTCTTCGCCTATTGCTAATCGCAACC LLTVPLLLVELVAVLALAKAAQSSILNRLVPAAAAMIVLGYPGDAKLDLWGIGASWWGLFSTIPFLYILYVLFIELGKSLTRQSEAVQKKVKLLRLLLIAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTAACAGTGCCATTGCTATTGGTTGAGCTGGTTGCAGTTCTTGCACTT---------GCA---AAGGCCGCGCAGAGC---TCAATC------------------------------------TTGAACCGC---TTGGTTCCTGCAGCTGCAGCCATGATCGTGCTTGGTTACCCGGGCGAT---------GCA------------------------------------------------------------------------------AAG---CTAGAC---------CTA---------------------TGGGGTATTGGTGCC------------------TCATGGTGG---GGACTGTTCTCAACCATCCCATTCCTATACATCCTGTACGTGCTG---------------TTC------ATT---GAACTTGGCAAGAGCTTGACCCGCCAG---------------TCAGAAGCAGTG---CAG---AAG---AAG---GTA---AAG---CTTCTT---CGCCTATTGCTAATCGCA---------------------------------------------------------------ACC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLLVELVAVLAL---A-KAAQS-SI------------LNR-LVPAAAAMIVLGYPGD---A--------------------------K-LD---L-------WGIGA------SWW-GLFSTIPFLYILYVL-----F--I-ELGKSLTRQ-----SEAV-Q-K-K-V-K-LL-RLLLIA---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_FJ545216 [Actinorhodopsin] Actinobacterium_MWH-EgelM2-3_B2_actinorhodopsin_gene_partial_cds_FJ545216 gi|224384103|gb|FJ545216| Actinobacterium MWH-EgelM2-3.B2 putative actinorhodopsin gene, partial cds. Actinobacterium MWH-EgelM2-3.B2 putative actinorhodopsin gene, partial cds. FJ545216 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:598497 genomic DNA strain 20-MAY-2009 #na Lake Egelsee other freshwater 47.257 8.817 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTACTAACTGTGCCATTGCTACTAGTTGAGCTAGTTGCCGTACTTGCACTTGCAAAGGCTGCTCAGAGCTCAATCTTGAACCGCTTGGTTCCTGCAGCTGCAGCGATGATTGCTCTTGGTTACCCAGGTGACGCAAAGCTAGACATCATGGGCATTGCGCCTTCAGTATGGGGTCTACTTTCAACCATTCCTTTCCTATACATCCTTTACGTACTATTCGTAGAGCTAGGCAAGAGCTTGGATCGTCAGTCAGCTGACGTACAGAAGAAGGTAAAGATCCTGAGACTGTTGCTTATCGCAACA LLTVPLLLVELVAVLALAKAAQSSILNRLVPAAAAMIALGYPGDAKLDIMGIAPSVWGLLSTIPFLYILYVLFVELGKSLDRQSADVQKKVKILRLLLIAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTAACTGTGCCATTGCTACTAGTTGAGCTAGTTGCCGTACTTGCACTT---------GCA---AAGGCTGCTCAGAGC---TCAATC------------------------------------TTGAACCGC---TTGGTTCCTGCAGCTGCAGCGATGATTGCTCTTGGTTACCCAGGTGAC---------GCA------------------------------------------------------------------------------AAG---CTAGAC---------ATC---------------------ATGGGCATTGCGCCT------------------TCAGTATGG---GGTCTACTTTCAACCATTCCTTTCCTATACATCCTTTACGTACTA---------------TTC------GTA---GAGCTAGGCAAGAGCTTGGATCGTCAG---------------TCAGCTGACGTA---CAG---AAG---AAG---GTA---AAG---ATCCTG---AGACTGTTGCTTATCGCA---------------------------------------------------------------ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLLVELVAVLAL---A-KAAQS-SI------------LNR-LVPAAAAMIALGYPGD---A--------------------------K-LD---I-------MGIAP------SVW-GLLSTIPFLYILYVL-----F--V-ELGKSLDRQ-----SADV-Q-K-K-V-K-IL-RLLLIA---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601714 [Actinorhodopsin] clone_20-5_KC601714 gi|523706422|gb|KC601714| Uncultured bacterium clone 20-5 actinorhodopsin gene, partial cds. Uncultured bacterium clone 20-5 actinorhodopsin gene, partial cds. KC601714 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 humic freshwater reservoir other freshwater 48.6158 14.6762 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGATACGTGGACTGGTTGTTGACGGTTCCATTGCTGCTCGTCGAAACCGTTGCAGTTCTTGCAATCGGTCGCCTTGCACAGAAGGCAATGCTTTCTCGCCTCGTGCCAGCAGCTGTCGCAATGATCGTCTTGGGTTACCCAGGCGATGCAAAGCTTGATCTCTTCGGAATCTCAGCACCAATCTGGGGCGCGCTCTCAACGATTCCGTTCCTCTACATCTTGTACGTGCTGTTCGTAGAACTCACCAAGAGCCTTGCAAACCAGTCAGAGCAGGTTCGTGCAACGGTCAGCCGTTTGCGCCTGCTGCTTATCGGTACGTGGGGCGTCTATCCCAT RYVDWLLTVPLLLVETVAVLAIGRLAQKAMLSRLVPAAVAMIVLGYPGDAKLDLFGISAPIWGALSTIPFLYILYVLFVELTKSLANQSEQVRATVSRLRLLLIGTWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACGTGGACTGG------------------------TTGTTGACGGTTCCATTGCTGCTCGTCGAAACCGTTGCAGTTCTTGCAATC---------GGT---CGCCTTGCACAGAAG---GCAATG------------------------------------CTTTCTCGC---CTCGTGCCAGCAGCTGTCGCAATGATCGTCTTGGGTTACCCAGGCGAT---------GCA------------------------------------------------------------------------------AAG---CTTGAT---------CTC---------------------TTCGGAATCTCAGCA------------------CCAATCTGG---GGCGCGCTCTCAACGATTCCGTTCCTCTACATCTTGTACGTGCTG---------------TTC------GTA---GAACTCACCAAGAGCCTTGCAAACCAG---------------TCAGAGCAGGTT---CGT---GCA---ACG---GTC---AGC---CGTTTG---CGCCTGCTGCTTATCGGT---------------------------------------------------------------ACGTGG---------GGCGTCTATCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLLLVETVAVLAI---G-RLAQK-AM------------LSR-LVPAAVAMIVLGYPGD---A--------------------------K-LD---L-------FGISA------PIW-GALSTIPFLYILYVL-----F--V-ELTKSLANQ-----SEQV-R-A-T-V-S-RL-RLLLIG---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663770 [Actinorhodopsin] SCGC_AAA028O09_Actinobacteria_HQ663770 gi|325163139|gb|HQ663770| Actinobacterium SCGC AAA028O09 rhodopsin gene, partial cds Actinobacterium SCGC AAA028O09 rhodopsin gene, partial cds HQ663770 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938468 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Mendota other freshwater 46.0095 -89.7006 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) GTAGATTGGTTCTTAACAGTTCCACTGCTAATGCTTGAAACAGTTGCCGTACTTGCACTTGCTCGTTCAGTACAGAAGTCAATGATGTACAAACTTGTACCAGCAGCTGCATTAATGATCGCACTTGGTTACCCAGGTGACGCTCGTCTAGACATCATGGGTATTTCTCCATCTGTCTGGGGTGCACTTTCAACAATTCCATTCCTTTACATTCTTTACGTATTATTCGTAGAACTAGGTAAGAGTCTGGAACGTCAATCAGCAGCAGTTCGTGAAAAAATCAGACTGCTTCGTTTATTACTTCTAGCAACTTGGGGCGTCTACCCGATGGTC VDWFLTVPLLMLETVAVLALARSVQKSMMYKLVPAAALMIALGYPGDARLDIMGISPSVWGALSTIPFLYILYVLFVELGKSLERQSAAVREKIRLLRLLLLATWGVYPMV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGATTGG------------------------TTCTTAACAGTTCCACTGCTAATGCTTGAAACAGTTGCCGTACTTGCACTT---------GCT---CGTTCAGTACAGAAG---TCAATG------------------------------------ATGTACAAA---CTTGTACCAGCAGCTGCATTAATGATCGCACTTGGTTACCCAGGTGAC---------GCT------------------------------------------------------------------------------CGT---CTAGAC---------ATC---------------------ATGGGTATTTCTCCA------------------TCTGTCTGG---GGTGCACTTTCAACAATTCCATTCCTTTACATTCTTTACGTATTA---------------TTC------GTA---GAACTAGGTAAGAGTCTGGAACGTCAA---------------TCAGCAGCAGTT---CGT---GAA---AAA---ATC---AGA---CTGCTT---CGTTTATTACTTCTAGCA---------------------------------------------------------------ACTTGG---------GGCGTCTACCCGATGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDW--------FLTVPLLMLETVAVLAL---A-RSVQK-SM------------MYK-LVPAAALMIALGYPGD---A--------------------------R-LD---I-------MGISP------SVW-GALSTIPFLYILYVL-----F--V-ELGKSLERQ-----SAAV-R-E-K-I-R-LL-RLLLLA---------------------TW---GVYPMV------------------------------------------------------------------------------------------------ [Actinorhodopsin]_KC601693 [Actinorhodopsin] clone_16-8_KC601693 gi|523706380|gb|KC601693| Uncultured bacterium clone 16-8 actinorhodopsin gene, partial cds. Uncultured bacterium clone 16-8 actinorhodopsin gene, partial cds. KC601693 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 humic freshwater reservoir other freshwater 48.6158 14.6762 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGGTACGTGGACTGGTTACTAACTGTTCCACTATTGCTACTTGAGACAATTGCAGTACTTGCACTTCCAACTGCGGAACGCAACTCACTTGTTTCTCGTCTAGTTCCAGCTTCAGCATTGATGATCATCCTTGGTTACCCAGGTGAAGTTGCTGCTGAAAACGGTCTGAAGATGTTGTGGGGCGCACTTTCCACAATTCCATTCCTCTTCATTCTTTACGTATTGTTCGTAGAGCTAACCAAGTCCCTTGACAAGCAGCCAGCTGAAGTATCCGCAACCGTAAAGCGCTTGCGTCTGCTTCTTATTGCTACCTGGGGCGTCTATCCCAT RYVDWLLTVPLLLLETIAVLALPTAERNSLVSRLVPASALMIILGYPGEVAAENGLKMLWGALSTIPFLFILYVLFVELTKSLDKQPAEVSATVKRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTACGTGGACTGG------------------------TTACTAACTGTTCCACTATTGCTACTTGAGACAATTGCAGTACTTGCACTT---------CCA---ACTGCGGAACGCAAC---TCACTT------------------------------------GTTTCTCGT---CTAGTTCCAGCTTCAGCATTGATGATCATCCTTGGTTACCCAGGTGAA---------GTT------------------------------------------------------------------------------GCT---GCTGAA---------AAC---------------------------GGTCTGAAG------------------ATGTTGTGG---GGCGCACTTTCCACAATTCCATTCCTCTTCATTCTTTACGTATTG---------------TTC------GTA---GAGCTAACCAAGTCCCTTGACAAGCAG---------------CCAGCTGAAGTA---TCC---GCA---ACC---GTA---AAG---CGCTTG---CGTCTGCTTCTTATTGCT---------------------------------------------------------------ACCTGG---------GGCGTCTATCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLLLLETIAVLAL---P-TAERN-SL------------VSR-LVPASALMIILGYPGE---V--------------------------A-AE---N---------GLK------MLW-GALSTIPFLFILYVL-----F--V-ELTKSLDKQ-----PAEV-S-A-T-V-K-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601700 [Actinorhodopsin] clone_18-4_KC601700 gi|523706394|gb|KC601700| Uncultured bacterium clone 18-4 actinorhodopsin gene, partial cds. Uncultured bacterium clone 18-4 actinorhodopsin gene, partial cds. KC601700 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 humic freshwater reservoir other freshwater 48.6158 14.6762 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGGTACGTGGACTGGTTACTAACTGTTCCACTATTGCTACTTGAGACAATTGCAGTACTTGCACTTCCAACTGCGGAACGCAAATCACTTGTTTCTCGTCTAGTTCCAGCTTCAGCATTGATGATCATCCTTGGTTACCCAGGTGAAGTTGCTGCTGAAAACGGTCCGAAGATGTTGTGGGGCGCACTTTCCACAATTCCATTCCTCTTCATTCTTTACGTATTGTTCGTAGAGCTAACCAAGTCCCTTGACAAGCAGCCAGCTGAAGTATCCGCAACCGTAAAGCGCTTGCGTCTGCTTCTTATTGCTACCTGGGGTGTCTATCCAAT RYVDWLLTVPLLLLETIAVLALPTAERKSLVSRLVPASALMIILGYPGEVAAENGPKMLWGALSTIPFLFILYVLFVELTKSLDKQPAEVSATVKRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTACGTGGACTGG------------------------TTACTAACTGTTCCACTATTGCTACTTGAGACAATTGCAGTACTTGCACTT---------CCA---ACTGCGGAACGCAAA---TCACTT------------------------------------GTTTCTCGT---CTAGTTCCAGCTTCAGCATTGATGATCATCCTTGGTTACCCAGGTGAA---------GTT------------------------------------------------------------------------------GCT---GCTGAA---------AAC---------------------------GGTCCGAAG------------------ATGTTGTGG---GGCGCACTTTCCACAATTCCATTCCTCTTCATTCTTTACGTATTG---------------TTC------GTA---GAGCTAACCAAGTCCCTTGACAAGCAG---------------CCAGCTGAAGTA---TCC---GCA---ACC---GTA---AAG---CGCTTG---CGTCTGCTTCTTATTGCT---------------------------------------------------------------ACCTGG---------GGTGTCTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLLLLETIAVLAL---P-TAERK-SL------------VSR-LVPASALMIILGYPGE---V--------------------------A-AE---N---------GPK------MLW-GALSTIPFLFILYVL-----F--V-ELTKSLDKQ-----PAEV-S-A-T-V-K-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601705 [Actinorhodopsin] clone_19-6_KC601705 gi|523706404|gb|KC601705| Uncultured bacterium clone 19-6 actinorhodopsin gene, partial cds. Uncultured bacterium clone 19-6 actinorhodopsin gene, partial cds. KC601705 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 humic freshwater reservoir other freshwater 48.6158 14.6762 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGGTATGTGGATTGGTTACTAACTGTTCCACTATTGCTACTTGAGACAATTGCAGTACTTGCACTTCCAACTGCGGAACGCAAATCACTTGTTTCTCGTCTAGTTCCAGCTTCAGCATTGATGATCATCCTTGGTTACCCAGGTGAAGTTGCTGCTGAAAACGGTCCGAAGATGTTGTGGGGCGCACTTTCCACAATTCCATTCCTCTTCATTCTTTACGTATTGTTCGTAGAGCTAACCAAGTCCCTTGACAAGCAGCCAGCTGAAGTATCCGCAACCGTAAAGCGCTTGCGTCTGCTTCTTATTGCTACCTGGGGCGTCTATCCCAT RYVDWLLTVPLLLLETIAVLALPTAERKSLVSRLVPASALMIILGYPGEVAAENGPKMLWGALSTIPFLFILYVLFVELTKSLDKQPAEVSATVKRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTATGTGGATTGG------------------------TTACTAACTGTTCCACTATTGCTACTTGAGACAATTGCAGTACTTGCACTT---------CCA---ACTGCGGAACGCAAA---TCACTT------------------------------------GTTTCTCGT---CTAGTTCCAGCTTCAGCATTGATGATCATCCTTGGTTACCCAGGTGAA---------GTT------------------------------------------------------------------------------GCT---GCTGAA---------AAC---------------------------GGTCCGAAG------------------ATGTTGTGG---GGCGCACTTTCCACAATTCCATTCCTCTTCATTCTTTACGTATTG---------------TTC------GTA---GAGCTAACCAAGTCCCTTGACAAGCAG---------------CCAGCTGAAGTA---TCC---GCA---ACC---GTA---AAG---CGCTTG---CGTCTGCTTCTTATTGCT---------------------------------------------------------------ACCTGG---------GGCGTCTATCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLLLLETIAVLAL---P-TAERK-SL------------VSR-LVPASALMIILGYPGE---V--------------------------A-AE---N---------GPK------MLW-GALSTIPFLFILYVL-----F--V-ELTKSLDKQ-----PAEV-S-A-T-V-K-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601717 [Actinorhodopsin] clone_21-3_KC601717 gi|523706428|gb|KC601717| Uncultured bacterium clone 21-3 actinorhodopsin gene, partial cds. Uncultured bacterium clone 21-3 actinorhodopsin gene, partial cds. KC601717 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 humic freshwater reservoir other freshwater 48.6158 14.6762 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 AGGTATGTGGATTGGTTACTAACTGTTCCACTATTGCTACTTGAGACAATTGCAGTACTTGCACTTCCAACTGCGGAACGCAAATCACTTGTTTCTCGTCTAGTTCCAGCTTCAGCATTGATGATCATCCTTGGTTACCCAGGTGAAGTTGCTGCTGAAAACGGTCCGAAGATGTTGTGGGGCGCACTTTCCACAATTCCATTCCTCTTCATTCTTTACGTATTGTTCGTAGAGCTAACCAAGTCCCTTGACAAGCAGCCAGCTGAAGTATCCGCAACCGTAAAGCGCTTGCGTCTGCTTCTTATTGCTACCTGGGGAGTATACCCAAT RYVDWLLTVPLLLLETIAVLALPTAERKSLVSRLVPASALMIILGYPGEVAAENGPKMLWGALSTIPFLFILYVLFVELTKSLDKQPAEVSATVKRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTATGTGGATTGG------------------------TTACTAACTGTTCCACTATTGCTACTTGAGACAATTGCAGTACTTGCACTT---------CCA---ACTGCGGAACGCAAA---TCACTT------------------------------------GTTTCTCGT---CTAGTTCCAGCTTCAGCATTGATGATCATCCTTGGTTACCCAGGTGAA---------GTT------------------------------------------------------------------------------GCT---GCTGAA---------AAC---------------------------GGTCCGAAG------------------ATGTTGTGG---GGCGCACTTTCCACAATTCCATTCCTCTTCATTCTTTACGTATTG---------------TTC------GTA---GAGCTAACCAAGTCCCTTGACAAGCAG---------------CCAGCTGAAGTA---TCC---GCA---ACC---GTA---AAG---CGCTTG---CGTCTGCTTCTTATTGCT---------------------------------------------------------------ACCTGG---------GGAGTATACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLLLLETIAVLAL---P-TAERK-SL------------VSR-LVPASALMIILGYPGE---V--------------------------A-AE---N---------GPK------MLW-GALSTIPFLFILYVL-----F--V-ELTKSLDKQ-----PAEV-S-A-T-V-K-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601689 [Actinorhodopsin] clone_15-8_KC601689 gi|523706372|gb|KC601689| Uncultured bacterium clone 15-8 actinorhodopsin gene, partial cds. Uncultured bacterium clone 15-8 actinorhodopsin gene, partial cds. KC601689 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 humic freshwater reservoir other freshwater 48.6158 14.6762 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGGTACGTGGACTGGTTACTAACTGTTCCACTATTGCTACTTGAGACAATTGCAGTACTTGCACTTCCAACTGCGGAACGCAAATCACTTGTTTCTCGTCTAGTTCCAGCTTCAGCATTGATGATCATCCTTGGTTACCCAGGTGAAGTTGCTGCTGAAAACGGTCCGAAGATGTTGTGGGGCGCACTTTCCACAATTCCATTCCTCTTCATTCTTTACGTATTGTTCGTAGAGCTAACCAAGTCCCTTGACAAGCAGCCAGCTGAAGTATCCGCAACCGTAAAGCGCTTGCGTCTGCTTCTTATTGCTACCTGGGGCGTCTACCCTAT RYVDWLLTVPLLLLETIAVLALPTAERKSLVSRLVPASALMIILGYPGEVAAENGPKMLWGALSTIPFLFILYVLFVELTKSLDKQPAEVSATVKRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTACGTGGACTGG------------------------TTACTAACTGTTCCACTATTGCTACTTGAGACAATTGCAGTACTTGCACTT---------CCA---ACTGCGGAACGCAAA---TCACTT------------------------------------GTTTCTCGT---CTAGTTCCAGCTTCAGCATTGATGATCATCCTTGGTTACCCAGGTGAA---------GTT------------------------------------------------------------------------------GCT---GCTGAA---------AAC---------------------------GGTCCGAAG------------------ATGTTGTGG---GGCGCACTTTCCACAATTCCATTCCTCTTCATTCTTTACGTATTG---------------TTC------GTA---GAGCTAACCAAGTCCCTTGACAAGCAG---------------CCAGCTGAAGTA---TCC---GCA---ACC---GTA---AAG---CGCTTG---CGTCTGCTTCTTATTGCT---------------------------------------------------------------ACCTGG---------GGCGTCTACCCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLLLLETIAVLAL---P-TAERK-SL------------VSR-LVPASALMIILGYPGE---V--------------------------A-AE---N---------GPK------MLW-GALSTIPFLFILYVL-----F--V-ELTKSLDKQ-----PAEV-S-A-T-V-K-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601710 [Actinorhodopsin] clone_20-1_KC601710 gi|523706414|gb|KC601710| Uncultured bacterium clone 20-1 actinorhodopsin gene, partial cds. Uncultured bacterium clone 20-1 actinorhodopsin gene, partial cds. KC601710 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 humic freshwater reservoir other freshwater 48.6158 14.6762 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGTTACGTGGACTGGTTACTAACTGTTCCACTATTGCTACTTGAGACAATTGCAGTACTTGCACTTCCAACTGCGGAACGCAAATCACTTGTTTCTCGTCTAGTTCCAGCTTCAGCATTGATGATCATCCTTGGTTACCCAGGTGAAGTTGCTGCTGAAAACGGTCCGAAGATGTTGTGGGGCGCACTTTCCACAATTCCATTCCTCTTC RYVDWLLTVPLLLLETIAVLALPTAERKSLVSRLVPASALMIILGYPGEVAAENGPKMLWGALSTIPFLF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTACGTGGACTGG------------------------TTACTAACTGTTCCACTATTGCTACTTGAGACAATTGCAGTACTTGCACTT---------CCA---ACTGCGGAACGCAAA---TCACTT------------------------------------GTTTCTCGT---CTAGTTCCAGCTTCAGCATTGATGATCATCCTTGGTTACCCAGGTGAA---------GTT------------------------------------------------------------------------------GCT---GCTGAA---------AAC---------------------------GGTCCGAAG------------------ATGTTGTGG---GGCGCACTTTCCACAATTCCATTCCTCTTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLLLLETIAVLAL---P-TAERK-SL------------VSR-LVPASALMIILGYPGE---V--------------------------A-AE---N---------GPK------MLW-GALSTIPFLF------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601684 [Actinorhodopsin] clone_1-8_KC601684 gi|523706362|gb|KC601684| Uncultured bacterium clone 1-8 actinorhodopsin gene, partial cds. Uncultured bacterium clone 1-8 actinorhodopsin gene, partial cds. KC601684 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 humic freshwater reservoir other freshwater 48.6158 14.6762 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGGTATGTGGACTGGTTACTAACTGTTCCACTATTGCTACTTGAGACAATTGCAGTACTTGCACTCCCAACTGCGGAACGCAAATCACTTGTTTCTCGTCTAGTTCCAGCTTCAGCATTGATGATCATCCTTGGTTACCCAGGTGAAGTTGCTGCTGAAAACGGTCCGAAGATGTTGTGGGGCGCACTTTCCACAATTCCATTCCTCTTCATTCTTTACGTATTGTTCGTAGAGCTAACCAAGTCCCTTGACAAGCAGCCAGCTGAAGTATCCGCAACCGTAAAGCGCTTGCGTCTGCTTCTTATTGCTACCTGGGGCGTCTACCCCAT RYVDWLLTVPLLLLETIAVLALPTAERKSLVSRLVPASALMIILGYPGEVAAENGPKMLWGALSTIPFLFILYVLFVELTKSLDKQPAEVSATVKRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTATGTGGACTGG------------------------TTACTAACTGTTCCACTATTGCTACTTGAGACAATTGCAGTACTTGCACTC---------CCA---ACTGCGGAACGCAAA---TCACTT------------------------------------GTTTCTCGT---CTAGTTCCAGCTTCAGCATTGATGATCATCCTTGGTTACCCAGGTGAA---------GTT------------------------------------------------------------------------------GCT---GCTGAA---------AAC---------------------------GGTCCGAAG------------------ATGTTGTGG---GGCGCACTTTCCACAATTCCATTCCTCTTCATTCTTTACGTATTG---------------TTC------GTA---GAGCTAACCAAGTCCCTTGACAAGCAG---------------CCAGCTGAAGTA---TCC---GCA---ACC---GTA---AAG---CGCTTG---CGTCTGCTTCTTATTGCT---------------------------------------------------------------ACCTGG---------GGCGTCTACCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLLLLETIAVLAL---P-TAERK-SL------------VSR-LVPASALMIILGYPGE---V--------------------------A-AE---N---------GPK------MLW-GALSTIPFLFILYVL-----F--V-ELTKSLDKQ-----PAEV-S-A-T-V-K-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601711 [Actinorhodopsin] clone_20-2_KC601711 gi|523706416|gb|KC601711| Uncultured bacterium clone 20-2 actinorhodopsin gene, partial cds. Uncultured bacterium clone 20-2 actinorhodopsin gene, partial cds. KC601711 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 humic freshwater reservoir other freshwater 48.6158 14.6762 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGATATGTGGATTGGTTACTAACTGTTCCACTATTGCTACTTGAGACAATTGCAGTACTTGCACTTCCAACTGCGGAACGCAAATCACTTGTTTCTCGTCTAGTTCCAGCTTCAGCATTGATGATCATCCTTGGTTACCCAGGTGAAGTTGCTGCTGAAAACGGTCCGAAGATGTTGTGGGGCGCACTTTCCACAATTCCATTCCTCTTCATTCTTTACGTATTGTTCGTAGAGCTAACCAAGTCCCTTGACAAGCAGCCAGCTGAAGTATCCGCAACCGTAAAGCGCTTGCGTCTGCTTCTTATTGCTACCTGGGGCGTCTACCCGAT RYVDWLLTVPLLLLETIAVLALPTAERKSLVSRLVPASALMIILGYPGEVAAENGPKMLWGALSTIPFLFILYVLFVELTKSLDKQPAEVSATVKRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATATGTGGATTGG------------------------TTACTAACTGTTCCACTATTGCTACTTGAGACAATTGCAGTACTTGCACTT---------CCA---ACTGCGGAACGCAAA---TCACTT------------------------------------GTTTCTCGT---CTAGTTCCAGCTTCAGCATTGATGATCATCCTTGGTTACCCAGGTGAA---------GTT------------------------------------------------------------------------------GCT---GCTGAA---------AAC---------------------------GGTCCGAAG------------------ATGTTGTGG---GGCGCACTTTCCACAATTCCATTCCTCTTCATTCTTTACGTATTG---------------TTC------GTA---GAGCTAACCAAGTCCCTTGACAAGCAG---------------CCAGCTGAAGTA---TCC---GCA---ACC---GTA---AAG---CGCTTG---CGTCTGCTTCTTATTGCT---------------------------------------------------------------ACCTGG---------GGCGTCTACCCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLLLLETIAVLAL---P-TAERK-SL------------VSR-LVPASALMIILGYPGE---V--------------------------A-AE---N---------GPK------MLW-GALSTIPFLFILYVL-----F--V-ELTKSLDKQ-----PAEV-S-A-T-V-K-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663772 [Actinorhodopsin] SCGC_AAA041A16_Actinobacteria_HQ663772 gi|325163143|gb|HQ663772| Actinobacterium SCGC AAA041A16 rhodopsin gene, partial cds Actinobacterium SCGC AAA041A16 rhodopsin gene, partial cds HQ663772 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938471 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTTGATTGGTTACTAACTGTTCCACTATTGCTACTTGAGACAATTGCTGTGCTTGCACTTCCAGCTGTGGAACGCAAGTCACTTGTTTCTCGCCTAGTTCCAGCTTCAGCACTTATGATCATCCTTGGTTACCCAGGTGAAGTTGCTGCTGAAAACGGTCCGAAGATGTTGTGGGGCGCACTTTCCACAATCCCATTCATCTTCATCCTTTACGTATTGTTCGTAGAGCTAACTAAGTCCCTAGATAAGCAGCCAGCTGAAGTATCCGCAACCGTCAAGCGCTTGCGTCTTCTTCTCATCGCTACTTGGGGCGTCTACCCGATGGTCATA YVDWLLTVPLLLLETIAVLALPAVERKSLVSRLVPASALMIILGYPGEVAAENGPKMLWGALSTIPFIFILYVLFVELTKSLDKQPAEVSATVKRLRLLLIATWGVYPMVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTTGATTGG------------------------TTACTAACTGTTCCACTATTGCTACTTGAGACAATTGCTGTGCTTGCACTT---------CCA---GCTGTGGAACGCAAG---TCACTT------------------------------------GTTTCTCGC---CTAGTTCCAGCTTCAGCACTTATGATCATCCTTGGTTACCCAGGTGAA---------GTT------------------------------------------------------------------------------GCT---GCTGAA---------AAC---------------------------GGTCCGAAG------------------ATGTTGTGG---GGCGCACTTTCCACAATCCCATTCATCTTCATCCTTTACGTATTG---------------TTC------GTA---GAGCTAACTAAGTCCCTAGATAAGCAG---------------CCAGCTGAAGTA---TCC---GCA---ACC---GTC---AAG---CGCTTG---CGTCTTCTTCTCATCGCT---------------------------------------------------------------ACTTGG---------GGCGTCTACCCGATGGTCATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLLLETIAVLAL---P-AVERK-SL------------VSR-LVPASALMIILGYPGE---V--------------------------A-AE---N---------GPK------MLW-GALSTIPFIFILYVL-----F--V-ELTKSLDKQ-----PAEV-S-A-T-V-K-RL-RLLLIA---------------------TW---GVYPMVI----------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663743 [Actinorhodopsin] SCGC_AAA027D23_Actinobacteria_HQ663743 gi|325163085|gb|HQ663743| Actinobacterium SCGC AAA027D23 rhodopsin gene, partial cds Actinobacterium SCGC AAA027D23 rhodopsin gene, partial cds HQ663743 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938429 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Mendota other freshwater 46.0095 -89.7006 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TGGTTACTAACTGTTCCACTATTGCTACTGGAAACAATTGCTGTTTTGGCTTTGCCAGCTGCAAATCGTAAGTCTCTTATCGCTCGCTTGGTTCCGGCTTCAGCAGCAATGATCGCGCTTGGTTATCCAGGTGAACTTACTGCTGAAATGGGTCCAAAGATGATGTGGGGCGCACTTTCCACAATCCCATTCCTATACATCCTTTACGTATTGTTCGTTGAGCTAACTAAGTCGCTAGACAAGCAGCCTGCTGAAGTTGCAGCAACTGTAAAGCGTCTACGTCTGTTGCTTATCGCAACTTGGGGCGTCTACCCGATGGTC WLLTVPLLLLETIAVLALPAANRKSLIARLVPASAAMIALGYPGELTAEMGPKMMWGALSTIPFLYILYVLFVELTKSLDKQPAEVAATVKRLRLLLIATWGVYPMV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTACTAACTGTTCCACTATTGCTACTGGAAACAATTGCTGTTTTGGCTTTG---------CCA---GCTGCAAATCGTAAG---TCTCTT------------------------------------ATCGCTCGC---TTGGTTCCGGCTTCAGCAGCAATGATCGCGCTTGGTTATCCAGGTGAA---------CTT------------------------------------------------------------------------------ACT---GCTGAA---------ATG---------------------------GGTCCAAAG------------------ATGATGTGG---GGCGCACTTTCCACAATCCCATTCCTATACATCCTTTACGTATTG---------------TTC------GTT---GAGCTAACTAAGTCGCTAGACAAGCAG---------------CCTGCTGAAGTT---GCA---GCA---ACT---GTA---AAG---CGTCTA---CGTCTGTTGCTTATCGCA---------------------------------------------------------------ACTTGG---------GGCGTCTACCCGATGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLLLETIAVLAL---P-AANRK-SL------------IAR-LVPASAAMIALGYPGE---L--------------------------T-AE---M---------GPK------MMW-GALSTIPFLYILYVL-----F--V-ELTKSLDKQ-----PAEV-A-A-T-V-K-RL-RLLLIA---------------------TW---GVYPMV------------------------------------------------------------------------------------------------ [Actinorhodopsin]_HQ663798 [Actinorhodopsin] SCGC_AAA044C20_Actinobacteria_HQ663798 gi|325163194|gb|HQ663798| Actinobacterium SCGC AAA044C20 rhodopsin gene, partial cds Actinobacterium SCGC AAA044C20 rhodopsin gene, partial cds HQ663798 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938516 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) CTAACTGTTCCACTATTGCTTCTAGAAACAATTGCAGTACTTGCCCTTCCGGCAATTCAGCGCAAGTCTCTAGTTTCAAAGCTTGTTCCAGCATCTGCTCTAATGATCATCCTTGGTTACCCAGGCGAAGTTTCTTCAGACATGACAACAAAGGCAATTTGGGGTGGACTTTCAACAATCCCATTCCTATTCATCCTTTACATCTTGTTCGTTGAGTTGACAAAGGCACTAGACAAGCAGCCAGCTACTGTTGCTGCAACTGTTAAGCGTCTTCGCCTATTGCTTATCGCAACATGGGGCGTCTACCCAATGGTC LTVPLLLLETIAVLALPAIQRKSLVSKLVPASALMIILGYPGEVSSDMTTKAIWGGLSTIPFLFILYILFVELTKALDKQPATVAATVKRLRLLLIATWGVYPMV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAACTGTTCCACTATTGCTTCTAGAAACAATTGCAGTACTTGCCCTT---------CCG---GCAATTCAGCGCAAG---TCTCTA------------------------------------GTTTCAAAG---CTTGTTCCAGCATCTGCTCTAATGATCATCCTTGGTTACCCAGGCGAA---------GTT------------------------------------------------------------------------------TCT---TCAGAC---------ATG---------------------------ACAACAAAG------------------GCAATTTGG---GGTGGACTTTCAACAATCCCATTCCTATTCATCCTTTACATCTTG---------------TTC------GTT---GAGTTGACAAAGGCACTAGACAAGCAG---------------CCAGCTACTGTT---GCT---GCA---ACT---GTT---AAG---CGTCTT---CGCCTATTGCTTATCGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCAATGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTVPLLLLETIAVLAL---P-AIQRK-SL------------VSK-LVPASALMIILGYPGE---V--------------------------S-SD---M---------TTK------AIW-GGLSTIPFLFILYIL-----F--V-ELTKALDKQ-----PATV-A-A-T-V-K-RL-RLLLIA---------------------TW---GVYPMV------------------------------------------------------------------------------------------------ [Actinorhodopsin]_HF571293 [Actinorhodopsin] clone_BSActR_OTU3_HF571293 gi|528066047|gb|HF571293| Uncultured bacterium partial actR gene for Actinorhodopsin, clone BSActR OTU3. Uncultured bacterium partial actR gene for Actinorhodopsin, clone BSActR OTU3. HF571293 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 30-juil-13 #na brackish water Baltic Sea marine 57.8 20 Distribution of acI-Actinorhodopsin genes in Baltic Sea salinity gradients indicates the success of facultative freshwater photoheterotrophs in brackish waters Salka,I., Wurzbacher,C., Garcia,S.L., Labrenz,M., Juergens,K. and Grossart,H.P. Unpublished #na #na TACCGATACGTTGACTGGTTACTAACTGTTCCACTATTGCTTCTAGAAACAATTGCAGTACTTGCCCTTCCGGCAATACAGCGCAAGTCTCTAGTTTCAAAACTAGTTCCAGCATCTGCTGCAATGATCATCCTTGGTTACCCGGGCGAAGTTTCTTCAGACATGATGACCAAGGGAATTTGGGGCGCACTTTCCACAATCCCATTCCTTTACATCCTTTACATCTTGTTCGTTGAGTTGACAAAGGCACTAGACAAGCAGCCAGGTGATGTAGCCGCAACTGTAAAGCGTCTTCGCCTATTGCTTATCGCAACCTGGGGCGTCTACCCAAT YRYVDWLLTVPLLLLETIAVLALPAIQRKSLVSKLVPASAAMIILGYPGEVSSDMMTKGIWGALSTIPFLYILYILFVELTKALDKQPGDVAATVKRLRLLLIATWGVYP ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCGATACGTTGACTGG------------------------TTACTAACTGTTCCACTATTGCTTCTAGAAACAATTGCAGTACTTGCCCTT---------CCG---GCAATACAGCGCAAG---TCTCTA------------------------------------GTTTCAAAA---CTAGTTCCAGCATCTGCTGCAATGATCATCCTTGGTTACCCGGGCGAA---------GTT------------------------------------------------------------------------------TCT---TCAGAC---------ATG---------------------------ATGACCAAG------------------GGAATTTGG---GGCGCACTTTCCACAATCCCATTCCTTTACATCCTTTACATCTTG---------------TTC------GTT---GAGTTGACAAAGGCACTAGACAAGCAG---------------CCAGGTGATGTA---GCC---GCA---ACT---GTA---AAG---CGTCTT---CGCCTATTGCTTATCGCA---------------------------------------------------------------ACCTGG---------GGCGTCTACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRYVDW--------LLTVPLLLLETIAVLAL---P-AIQRK-SL------------VSK-LVPASAAMIILGYPGE---V--------------------------S-SD---M---------MTK------GIW-GALSTIPFLYILYIL-----F--V-ELTKALDKQ-----PGDV-A-A-T-V-K-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663745 [Actinorhodopsin] SCGC_AAA027E22_Actinobacteria_HQ663745 gi|325163089|gb|HQ663745| Actinobacterium SCGC AAA027E22 rhodopsin gene, partial cds Actinobacterium SCGC AAA027E22 rhodopsin gene, partial cds HQ663745 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938431 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Mendota other freshwater 46.0095 -89.7006 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTTGATTGGCTTCTAACTGTTCCTCTACTACTTGTAGAAACAGTTGCAGTACTTGCATTGGCTAAGAAAGTTCAAAGCCAATTACTAGTTCGTTTAGTTCCAGCATCAGCATTAATGATCATCCTTGGTTATCCAGGTGAAGTTACCGCTGAAATTGGTCCAAAATTGGTTTGGGGAGCACTTTCAACAATCCCATTCCTTTACATTCTTTGGATTCTATTTGTTGAACTTGGTAAGTCCATGGGACGCCAACCAGCAGGTGTTGCTAAAGAATTAAGAGGTTTGCGTTTAACTCTTATTGCAACTTGGGGCGTCTATCCAATGGTCATA YVDWLLTVPLLLVETVAVLALAKKVQSQLLVRLVPASALMIILGYPGEVTAEIGPKLVWGALSTIPFLYILWILFVELGKSMGRQPAGVAKELRGLRLTLIATWGVYPMVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTTGATTGG------------------------CTTCTAACTGTTCCTCTACTACTTGTAGAAACAGTTGCAGTACTTGCATTG---------GCT---AAGAAAGTTCAAAGC---CAATTA------------------------------------CTAGTTCGT---TTAGTTCCAGCATCAGCATTAATGATCATCCTTGGTTATCCAGGTGAA---------GTT------------------------------------------------------------------------------ACC---GCTGAA---------ATT---------------------------GGTCCAAAA------------------TTGGTTTGG---GGAGCACTTTCAACAATCCCATTCCTTTACATTCTTTGGATTCTA---------------TTT------GTT---GAACTTGGTAAGTCCATGGGACGCCAA---------------CCAGCAGGTGTT---GCT---AAA---GAA---TTA---AGA---GGTTTG---CGTTTAACTCTTATTGCA---------------------------------------------------------------ACTTGG---------GGCGTCTATCCAATGGTCATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLLVETVAVLAL---A-KKVQS-QL------------LVR-LVPASALMIILGYPGE---V--------------------------T-AE---I---------GPK------LVW-GALSTIPFLYILWIL-----F--V-ELGKSMGRQ-----PAGV-A-K-E-L-R-GL-RLTLIA---------------------TW---GVYPMVI----------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663817 [Actinorhodopsin] SCGC_AAA278F23_Actinobacteria_HQ663817 gi|325163231|gb|HQ663817| Actinobacterium SCGC AAA278F23 rhodopsin gene, partial cds Actinobacterium SCGC AAA278F23 rhodopsin gene, partial cds HQ663817 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938552 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTTGATTGGCTTCTAACTGTTCCTCTACTACTTGTAGAAACAGTTGCAGTGCTTGCATTGGCAAAGAAAGTTCAAAGCCAATTGTTAGTTCGCTTGATCCCAGCTTCTGCTGCGATGATCATTCTTGGTTACCCAGGTGAAGTTGCAACAGAACTTGGTCCAAAAATGGTTTGGGGCGCACTATCAACAATTCCATTCCTATACATTCTTTACATCTTGTTTGTTGAACTTGGTAAGTCCATGGGACGCCAACCAGCAGGTGTTGCTAAAGAAGTAAGAGGTTTGCGTTTGACATTAATCGGTACATGGGGCGTCTACCCGATGGTCATA YVDWLLTVPLLLVETVAVLALAKKVQSQLLVRLIPASAAMIILGYPGEVATELGPKMVWGALSTIPFLYILYILFVELGKSMGRQPAGVAKEVRGLRLTLIGTWGVYPMVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTTGATTGG------------------------CTTCTAACTGTTCCTCTACTACTTGTAGAAACAGTTGCAGTGCTTGCATTG---------GCA---AAGAAAGTTCAAAGC---CAATTG------------------------------------TTAGTTCGC---TTGATCCCAGCTTCTGCTGCGATGATCATTCTTGGTTACCCAGGTGAA---------GTT------------------------------------------------------------------------------GCA---ACAGAA---------CTT---------------------------GGTCCAAAA------------------ATGGTTTGG---GGCGCACTATCAACAATTCCATTCCTATACATTCTTTACATCTTG---------------TTT------GTT---GAACTTGGTAAGTCCATGGGACGCCAA---------------CCAGCAGGTGTT---GCT---AAA---GAA---GTA---AGA---GGTTTG---CGTTTGACATTAATCGGT---------------------------------------------------------------ACATGG---------GGCGTCTACCCGATGGTCATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLLVETVAVLAL---A-KKVQS-QL------------LVR-LIPASAAMIILGYPGE---V--------------------------A-TE---L---------GPK------MVW-GALSTIPFLYILYIL-----F--V-ELGKSMGRQ-----PAGV-A-K-E-V-R-GL-RLTLIG---------------------TW---GVYPMVI----------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601688 [Actinorhodopsin] clone_15-6_KC601688 gi|523706370|gb|KC601688| Uncultured bacterium clone 15-6 actinorhodopsin gene, partial cds. Uncultured bacterium clone 15-6 actinorhodopsin gene, partial cds. KC601688 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 humic freshwater reservoir other freshwater 48.6158 14.6762 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGTTACGTGGACTGGATCCTCACTGTTCCACTACTTCTCGTTGAAGTAATCGCTGTACTCGGACTTGCAAAGGCTGCATCAAGCTCATTGATCAACCGCCTCGTCCCAGCATCTGCTGCAATGATCATCTTGGGTTACCCAGGAGAAATTTCATCAGTCAACAGCACAAAGATCCTCTTCGGTGTCCTTTCAACAATTCCATTCCTCTACATCCTTTATGTACTCTTCGTAGAGCTTGGTAATTCATTGGATCGCCAGCCAGAAGGTGTTGCAGCAACAGTCGGACGCCTCCGTCTACTCTTGATCGCAACATGGGGCGTCTACCCCAT RYVDWILTVPLLLVEVIAVLGLAKAASSSLINRLVPASAAMIILGYPGEISSVNSTKILFGVLSTIPFLYILYVLFVELGNSLDRQPEGVAATVGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTACGTGGACTGG------------------------ATCCTCACTGTTCCACTACTTCTCGTTGAAGTAATCGCTGTACTCGGACTT---------GCA---AAGGCTGCATCAAGC---TCATTG------------------------------------ATCAACCGC---CTCGTCCCAGCATCTGCTGCAATGATCATCTTGGGTTACCCAGGAGAA---------ATT------------------------------------------------------------------------------TCA---TCAGTC---------AAC---------------------------AGCACAAAG------------------ATCCTCTTC---GGTGTCCTTTCAACAATTCCATTCCTCTACATCCTTTATGTACTC---------------TTC------GTA---GAGCTTGGTAATTCATTGGATCGCCAG---------------CCAGAAGGTGTT---GCA---GCA---ACA---GTC---GGA---CGCCTC---CGTCTACTCTTGATCGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------ILTVPLLLVEVIAVLGL---A-KAASS-SL------------INR-LVPASAAMIILGYPGE---I--------------------------S-SV---N---------STK------ILF-GVLSTIPFLYILYVL-----F--V-ELGNSLDRQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601716 [Actinorhodopsin] clone_21-1_KC601716 gi|523706426|gb|KC601716| Uncultured bacterium clone 21-1 actinorhodopsin gene, partial cds. Uncultured bacterium clone 21-1 actinorhodopsin gene, partial cds. KC601716 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 humic freshwater reservoir other freshwater 48.6158 14.6762 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGGTATGTGGACTGGATCCTCACTGTTCCACTACTTCTCGTTGAAGTAATCGCTGTACTCGGACTTGCAAAGGCTGCATCAAGCTCATTGATCAACCGCCTCGTCCCAGCATCTGCTGCAATGATCATCTTGGGTTACCCAGGAGAAATTTCATCAGTCAACAGCACAAAGATCCTCTTCGGTGTCCTTTCAACAATTCCATTCCTCTACATCCTTTATGTACTCTTCGTAGAGCTTGGTAATTCATTGGATCGCCAGCCAGAAGGTGTTGCAGCAACAGTCGGACGCCTCCGTCTACTCTTGATCGCAACATGGGGCGTCTACCCCAT RYVDWILTVPLLLVEVIAVLGLAKAASSSLINRLVPASAAMIILGYPGEISSVNSTKILFGVLSTIPFLYILYVLFVELGNSLDRQPEGVAATVGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTATGTGGACTGG------------------------ATCCTCACTGTTCCACTACTTCTCGTTGAAGTAATCGCTGTACTCGGACTT---------GCA---AAGGCTGCATCAAGC---TCATTG------------------------------------ATCAACCGC---CTCGTCCCAGCATCTGCTGCAATGATCATCTTGGGTTACCCAGGAGAA---------ATT------------------------------------------------------------------------------TCA---TCAGTC---------AAC---------------------------AGCACAAAG------------------ATCCTCTTC---GGTGTCCTTTCAACAATTCCATTCCTCTACATCCTTTATGTACTC---------------TTC------GTA---GAGCTTGGTAATTCATTGGATCGCCAG---------------CCAGAAGGTGTT---GCA---GCA---ACA---GTC---GGA---CGCCTC---CGTCTACTCTTGATCGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------ILTVPLLLVEVIAVLGL---A-KAASS-SL------------INR-LVPASAAMIILGYPGE---I--------------------------S-SV---N---------STK------ILF-GVLSTIPFLYILYVL-----F--V-ELGNSLDRQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601683 [Actinorhodopsin] clone_1-7_KC601683 gi|523706360|gb|KC601683| Uncultured bacterium clone 1-7 actinorhodopsin gene, partial cds. Uncultured bacterium clone 1-7 actinorhodopsin gene, partial cds. KC601683 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 humic freshwater reservoir other freshwater 48.6158 14.6762 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 AGGTACGTTGACTGGATCCTCACTGTTCCACTACTTCTCGTTGAAGTAATCGCTGTACTCGGACTTGCAAAGGCTGCATCAAGCTCATTGATCAACCGCCTCGTCCCAGCATCTGCTGCAATGATCATCTTGGGTTACCCAGGAGAAATTTCATCAGTCAACAGCACAAAGATCCTCTTCGGTGTCCTTTCAACAATTCCATTCCTCTACATCCTTTATGTACTCTTCGTAGAGCTTGGTAATTCATTGGATCGCCAGCCAGAAGGTGTTGCAGCAACAGTCGGACGCCTCCGTCTACTCTTGATCGCAACATGGGGCGTCTACCCCAT RYVDWILTVPLLLVEVIAVLGLAKAASSSLINRLVPASAAMIILGYPGEISSVNSTKILFGVLSTIPFLYILYVLFVELGNSLDRQPEGVAATVGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACGTTGACTGG------------------------ATCCTCACTGTTCCACTACTTCTCGTTGAAGTAATCGCTGTACTCGGACTT---------GCA---AAGGCTGCATCAAGC---TCATTG------------------------------------ATCAACCGC---CTCGTCCCAGCATCTGCTGCAATGATCATCTTGGGTTACCCAGGAGAA---------ATT------------------------------------------------------------------------------TCA---TCAGTC---------AAC---------------------------AGCACAAAG------------------ATCCTCTTC---GGTGTCCTTTCAACAATTCCATTCCTCTACATCCTTTATGTACTC---------------TTC------GTA---GAGCTTGGTAATTCATTGGATCGCCAG---------------CCAGAAGGTGTT---GCA---GCA---ACA---GTC---GGA---CGCCTC---CGTCTACTCTTGATCGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------ILTVPLLLVEVIAVLGL---A-KAASS-SL------------INR-LVPASAAMIILGYPGE---I--------------------------S-SV---N---------STK------ILF-GVLSTIPFLYILYVL-----F--V-ELGNSLDRQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601682 [Actinorhodopsin] clone_1-3_KC601682 gi|523706358|gb|KC601682| Uncultured bacterium clone 1-3 actinorhodopsin gene, partial cds. Uncultured bacterium clone 1-3 actinorhodopsin gene, partial cds. KC601682 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 humic freshwater reservoir other freshwater 48.6158 14.6762 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGGTACGTGGACTGGATCCTCACTGTTCCACTACTTCTCGTTGAAGTAATCGCTGTACTCGGACTTGCAAAGGCTGCATCAAGCTCATTGATCAACCGCCTCGTCCCAGCATCTGCTGCAATGATCATCTTGGGTTACCCAGGAGAAATTTCATCAGTCAACAGCACAAAGATCCTCTTCGGTGTCCTTTCAACAATTCCATTCCTCTACATCCTTTATGTACTCTTCGTAGAGCTTGGTAATTCATTGGATCGCCAGCCAGAAGGTGTTGCAGCAACAGTCGGACGCCTCCGTCTACTCTTGATCGCAACATGGGGCGTCTACCCCAT RYVDWILTVPLLLVEVIAVLGLAKAASSSLINRLVPASAAMIILGYPGEISSVNSTKILFGVLSTIPFLYILYVLFVELGNSLDRQPEGVAATVGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTACGTGGACTGG------------------------ATCCTCACTGTTCCACTACTTCTCGTTGAAGTAATCGCTGTACTCGGACTT---------GCA---AAGGCTGCATCAAGC---TCATTG------------------------------------ATCAACCGC---CTCGTCCCAGCATCTGCTGCAATGATCATCTTGGGTTACCCAGGAGAA---------ATT------------------------------------------------------------------------------TCA---TCAGTC---------AAC---------------------------AGCACAAAG------------------ATCCTCTTC---GGTGTCCTTTCAACAATTCCATTCCTCTACATCCTTTATGTACTC---------------TTC------GTA---GAGCTTGGTAATTCATTGGATCGCCAG---------------CCAGAAGGTGTT---GCA---GCA---ACA---GTC---GGA---CGCCTC---CGTCTACTCTTGATCGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------ILTVPLLLVEVIAVLGL---A-KAASS-SL------------INR-LVPASAAMIILGYPGE---I--------------------------S-SV---N---------STK------ILF-GVLSTIPFLYILYVL-----F--V-ELGNSLDRQ-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663790 [Actinorhodopsin] SCGC_AAA043L13_Actinobacteria_HQ663790 gi|325163179|gb|HQ663790| Actinobacterium SCGC AAA043L13 rhodopsinlike gene, partial sequence Actinobacterium SCGC AAA043L13 rhodopsinlike gene, partial sequence HQ663790 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938499 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) GATTGGATCCTTACAGTTCCACTACTTCTCGTAGAAGTAATTGCAGTTCTTGGCCTTGCCAAGGCAATTTCTAAGTCACTGATTTATCGCTTAGTTCCTGCATCTGCAGCGATGATCATCTTGGGTTACCCAGGAGAAATTTCATCAGTCAATGGAACAAAGTGGCTCTTCGGAATCTTGTCAACAATTCCATTCCTTTACATTCTTTATGTTCTCTTCGCAGAACTAACAAAGTCATTGGAACGCCAACCTGAAGGTGTTGCAGCAACTGTCGGCCGCTTGCGTTGGCTCTTGCTCGCGACATGGGGCGTCTACCCAATGGTCATA DWILTVPLLLVEVIAVLGLAKAISKSLIYRLVPASAAMIILGYPGEISSVNGTKWLFGILSTIPFLYILYVLFAELTKSLERQPEGVAATVGRLRWLLLATWGVYPMVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTGG------------------------ATCCTTACAGTTCCACTACTTCTCGTAGAAGTAATTGCAGTTCTTGGCCTT---------GCC---AAGGCAATTTCTAAG---TCACTG------------------------------------ATTTATCGC---TTAGTTCCTGCATCTGCAGCGATGATCATCTTGGGTTACCCAGGAGAA---------ATT------------------------------------------------------------------------------TCA---TCAGTC---------AAT---------------------------GGAACAAAG------------------TGGCTCTTC---GGAATCTTGTCAACAATTCCATTCCTTTACATTCTTTATGTTCTC---------------TTC------GCA---GAACTAACAAAGTCATTGGAACGCCAA---------------CCTGAAGGTGTT---GCA---GCA---ACT---GTC---GGC---CGCTTG---CGTTGGCTCTTGCTCGCG---------------------------------------------------------------ACATGG---------GGCGTCTACCCAATGGTCATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DW--------ILTVPLLLVEVIAVLGL---A-KAISK-SL------------IYR-LVPASAAMIILGYPGE---I--------------------------S-SV---N---------GTK------WLF-GILSTIPFLYILYVL-----F--A-ELTKSLERQ-----PEGV-A-A-T-V-G-RL-RWLLLA---------------------TW---GVYPMVI----------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601706 [Actinorhodopsin] clone_19-8_KC601706 gi|523706406|gb|KC601706| Uncultured bacterium clone 19-8 actinorhodopsin gene, partial cds. Uncultured bacterium clone 19-8 actinorhodopsin gene, partial cds. KC601706 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 humic freshwater reservoir other freshwater 48.6158 14.6762 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 AGGTACGTGGACTGGATTCTTACTGTTCCTCTTCTTCTTGTTGAAGTTATTGCTGTTCTTGGTCTTGCTAAAGCAGCTTCTTCTTCATTGATTGGTCGCCTCGTTCCAGCTTCTGCTGCAATGATCATCTTGGGTTACCCAGGTGAAATTTCTTCAGTGAACAGCACCAAGATCCTTTGGGGTGTTCTTTCAACACTTCCATTCCTATACATCCTTTATGTTCTATTCGTAGAACTTGGTAAGTCACTTGATCGTCGACCTGAAGGTGTTGCAGCGACAGTAGGTCGCCTACGTCTTCTCTTGATCGCAACATGGGGCGTCTACCCCAT RYVDWILTVPLLLVEVIAVLGLAKAASSSLIGRLVPASAAMIILGYPGEISSVNSTKILWGVLSTLPFLYILYVLFVELGKSLDRRPEGVAATVGRLRLLLIATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTACGTGGACTGG------------------------ATTCTTACTGTTCCTCTTCTTCTTGTTGAAGTTATTGCTGTTCTTGGTCTT---------GCT---AAAGCAGCTTCTTCT---TCATTG------------------------------------ATTGGTCGC---CTCGTTCCAGCTTCTGCTGCAATGATCATCTTGGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCT---TCAGTG---------AAC---------------------------AGCACCAAG------------------ATCCTTTGG---GGTGTTCTTTCAACACTTCCATTCCTATACATCCTTTATGTTCTA---------------TTC------GTA---GAACTTGGTAAGTCACTTGATCGTCGA---------------CCTGAAGGTGTT---GCA---GCG---ACA---GTA---GGT---CGCCTA---CGTCTTCTCTTGATCGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------ILTVPLLLVEVIAVLGL---A-KAASS-SL------------IGR-LVPASAAMIILGYPGE---I--------------------------S-SV---N---------STK------ILW-GVLSTLPFLYILYVL-----F--V-ELGKSLDRR-----PEGV-A-A-T-V-G-RL-RLLLIA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663787 [Actinorhodopsin] SCGC_AAA043J08_Actinobacteria_HQ663787 gi|325163173|gb|HQ663787| Actinobacterium SCGC AAA043J08 rhodopsin gene, partial cds Actinobacterium SCGC AAA043J08 rhodopsin gene, partial cds HQ663787 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938496 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTTGATTGGATTCTGACAGTACCTCTACTTCTAGCTGAAGTTGTTGCTGTTCTAGCACTAGCGAAAGAGCTTTCAAAGTCAATGATGGGTCGCTTGATCCCAGCATCGGCTGCGATGATCATTCTTGGTTACCCAGGAGAAATTTCAAACAGCAACTCAACAAAGATTCTTTGGGGTGTGCTTTCAACTCTTCCATTCATTTACATCCTGTATGTATTGTTTGTTGAGCTTGGTAAGTCATTGGATCGCCAACCTGCAGGAGTCGCTGCAACAATTGGTCGTCTACGTTTGCTACTTATCGCAACGTGGGGTGTCTATCCGATGGTCATA YVDWILTVPLLLAEVVAVLALAKELSKSMMGRLIPASAAMIILGYPGEISNSNSTKILWGVLSTLPFIYILYVLFVELGKSLDRQPAGVAATIGRLRLLLIATWGVYPMVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTTGATTGG------------------------ATTCTGACAGTACCTCTACTTCTAGCTGAAGTTGTTGCTGTTCTAGCACTA---------GCG---AAAGAGCTTTCAAAG---TCAATG------------------------------------ATGGGTCGC---TTGATCCCAGCATCGGCTGCGATGATCATTCTTGGTTACCCAGGAGAA---------ATT------------------------------------------------------------------------------TCA---AACAGC---------AAC---------------------------TCAACAAAG------------------ATTCTTTGG---GGTGTGCTTTCAACTCTTCCATTCATTTACATCCTGTATGTATTG---------------TTT------GTT---GAGCTTGGTAAGTCATTGGATCGCCAA---------------CCTGCAGGAGTC---GCT---GCA---ACA---ATT---GGT---CGTCTA---CGTTTGCTACTTATCGCA---------------------------------------------------------------ACGTGG---------GGTGTCTATCCGATGGTCATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------ILTVPLLLAEVVAVLAL---A-KELSK-SM------------MGR-LIPASAAMIILGYPGE---I--------------------------S-NS---N---------STK------ILW-GVLSTLPFIYILYVL-----F--V-ELGKSLDRQ-----PAGV-A-A-T-I-G-RL-RLLLIA---------------------TW---GVYPMVI----------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601686 [Actinorhodopsin] clone_15-3_KC601686 gi|523706366|gb|KC601686| Uncultured bacterium clone 15-3 actinorhodopsin gene, partial cds. Uncultured bacterium clone 15-3 actinorhodopsin gene, partial cds. KC601686 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 humic freshwater reservoir other freshwater 48.6158 14.6762 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGGTATATCGACTGGCTTCTCACTGTCCCATTGCTTCTCGTTGAAGTAATTGCTGTTCTTGCATTGGCTAAGGAAGTATCTAGGTCACTCATCATGCGTCTGGTCCCAGCATCTGCTGCGATGATCGCATTGGGTTACCCAGGAGAAATCTCAACTGATTCAACTACTGCTGCAATTTATGGCGTACTTTCAACAATCCCATTCCTTTACATCTTGTACGTTCTCTTCGTAGAACTCACAAAGTCATTGGATCGTCAGCCAGAGGGAGTTGCAGACACTGTAAAGCGTCTTCGCCTTCTTCTCGTTGCAACATGGGGCGTCTACCCCAT RYIDWLLTVPLLLVEVIAVLALAKEVSRSLIMRLVPASAAMIALGYPGEISTDSTTAAIYGVLSTIPFLYILYVLFVELTKSLDRQPEGVADTVKRLRLLLVATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTATATCGACTGG------------------------CTTCTCACTGTCCCATTGCTTCTCGTTGAAGTAATTGCTGTTCTTGCATTG---------GCT---AAGGAAGTATCTAGG---TCACTC------------------------------------ATCATGCGT---CTGGTCCCAGCATCTGCTGCGATGATCGCATTGGGTTACCCAGGAGAA---------ATC------------------------------------------------------------------------------TCA---ACTGAT---------TCA---------------------------ACTACTGCT------------------GCAATTTAT---GGCGTACTTTCAACAATCCCATTCCTTTACATCTTGTACGTTCTC---------------TTC------GTA---GAACTCACAAAGTCATTGGATCGTCAG---------------CCAGAGGGAGTT---GCA---GAC---ACT---GTA---AAG---CGTCTT---CGCCTTCTTCTCGTTGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLLVEVIAVLAL---A-KEVSR-SL------------IMR-LVPASAAMIALGYPGE---I--------------------------S-TD---S---------TTA------AIY-GVLSTIPFLYILYVL-----F--V-ELTKSLDRQ-----PEGV-A-D-T-V-K-RL-RLLLVA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601696 [Actinorhodopsin] clone_17-6_KC601696 gi|523706386|gb|KC601696| Uncultured bacterium clone 17-6 actinorhodopsin gene, partial cds. Uncultured bacterium clone 17-6 actinorhodopsin gene, partial cds. KC601696 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 humic freshwater reservoir other freshwater 48.6158 14.6762 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGATACATCGACTGGCTTCTCACTGTCCCATTGCTTCTCGTTGAAGTAATTGCTGTTCTTGCATTGGCTAAGGAAGTATCTAAGTCACTCATCATGCGTCTGGTCCCAGCATCTGCTGCGATGATCGCATTGGGTTACCCAGGAGAAATCTCAACTGATTCAACTACTGCTGCAATTCATGGCGTACTTTCAACAATCCCATTCCTTTACATCTTGTACGTTCTCTTCGTAGAACTCACAAAGTCATTGGATCGTCAGCCAGAGGGAGTTGCAGACACTGTAAAGCGTCTTCGCCTTCTTCTCGTTGCAACATG RYIDWLLTVPLLLVEVIAVLALAKEVSKSLIMRLVPASAAMIALGYPGEISTDSTTAAIHGVLSTIPFLYILYVLFVELTKSLDRQPEGVADTVKRLRLLLVAT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACATCGACTGG------------------------CTTCTCACTGTCCCATTGCTTCTCGTTGAAGTAATTGCTGTTCTTGCATTG---------GCT---AAGGAAGTATCTAAG---TCACTC------------------------------------ATCATGCGT---CTGGTCCCAGCATCTGCTGCGATGATCGCATTGGGTTACCCAGGAGAA---------ATC------------------------------------------------------------------------------TCA---ACTGAT---------TCA---------------------------ACTACTGCT------------------GCAATTCAT---GGCGTACTTTCAACAATCCCATTCCTTTACATCTTGTACGTTCTC---------------TTC------GTA---GAACTCACAAAGTCATTGGATCGTCAG---------------CCAGAGGGAGTT---GCA---GAC---ACT---GTA---AAG---CGTCTT---CGCCTTCTTCTCGTTGCA---------------------------------------------------------------ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYIDW--------LLTVPLLLVEVIAVLAL---A-KEVSK-SL------------IMR-LVPASAAMIALGYPGE---I--------------------------S-TD---S---------TTA------AIH-GVLSTIPFLYILYVL-----F--V-ELTKSLDRQ-----PEGV-A-D-T-V-K-RL-RLLLVA---------------------T---------------------------------------------------------------------------------------------------------- [Actinorhodopsin]_KC601712 [Actinorhodopsin] clone_20-3_KC601712 gi|523706418|gb|KC601712| Uncultured bacterium clone 20-3 actinorhodopsin gene, partial cds. Uncultured bacterium clone 20-3 actinorhodopsin gene, partial cds. KC601712 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 21-juil-13 01-juil-11 humic freshwater reservoir other freshwater 48.6158 14.6762 Insights into Variability of Actinorhodopsin Genes of the LG1 Cluster in Two Different Freshwater Habitats Jezberova,J., Jezbera,J. and Hahn,M.W. PLoS ONE 8 (7), E68542 (2013) 23844219 genotype: LG1 CGATATGTTGACTGGCTTTTGACTGTCCCACTTCTACTTGTAGAGGTAATCGCAGTGCTTGCACTTGCAAAGGAAGTTTCAAAGTCATTGATCATGCGTCTTGTTCCAGCATCTGCTGCAATGATTGCACTTGGCTACCCAGGTGAAATCGCAACTGATACAACAACAGCTGCAATCTACGGCGTGCTTTCAACAATTCCATTCCTTTATATTCTCTACGTTCTTTTCGTAGAGCTTACAAAGTCACTTGACCGTCAGCCAGAAGGAGTTGCAGACACTGTAAAGCGTCTTCGCCTTCTTCTCGTTGCAACATGGGGCGTCTACCCCAT RYVDWLLTVPLLLVEVIAVLALAKEVSKSLIMRLVPASAAMIALGYPGEIATDTTTAAIYGVLSTIPFLYILYVLFVELTKSLDRQPEGVADTVKRLRLLLVATWGVYP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATATGTTGACTGG------------------------CTTTTGACTGTCCCACTTCTACTTGTAGAGGTAATCGCAGTGCTTGCACTT---------GCA---AAGGAAGTTTCAAAG---TCATTG------------------------------------ATCATGCGT---CTTGTTCCAGCATCTGCTGCAATGATTGCACTTGGCTACCCAGGTGAA---------ATC------------------------------------------------------------------------------GCA---ACTGAT---------ACA---------------------------ACAACAGCT------------------GCAATCTAC---GGCGTGCTTTCAACAATTCCATTCCTTTATATTCTCTACGTTCTT---------------TTC------GTA---GAGCTTACAAAGTCACTTGACCGTCAG---------------CCAGAAGGAGTT---GCA---GAC---ACT---GTA---AAG---CGTCTT---CGCCTTCTTCTCGTTGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYVDW--------LLTVPLLLVEVIAVLAL---A-KEVSK-SL------------IMR-LVPASAAMIALGYPGE---I--------------------------A-TD---T---------TTA------AIY-GVLSTIPFLYILYVL-----F--V-ELTKSLDRQ-----PEGV-A-D-T-V-K-RL-RLLLVA---------------------TW---GVYP-------------------------------------------------------------------------------------------------- [Actinorhodopsin]_HQ663819 [Actinorhodopsin] SCGC_AAA278I14_Actinobacteria_HQ663819 gi|325163235|gb|HQ663819| Actinobacterium SCGC AAA278I14 rhodopsin gene, partial cds Actinobacterium SCGC AAA278I14 rhodopsin gene, partial cds HQ663819 [[other rhodopsin/Actinorhodopsin-like cluster]] other rhodopsin Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria] taxon:938555 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTAGATTGGATCCTCACCGTTCCGCTGTTGCTCGTCGAGGTAATTGCTGTTCTGGCTCTTGCCCGCCAAGCTTCGAAGTCACTGATGAATCGTCTTGTTCCTGCATCAGCAGCCATGATCATTCTCGGCTACCCAGGTGAAATCTCTAACGTCACCAGCGAGAAGGTAATTTGGGGCGTCTTGTCGACCCTTCCATTCCTTTACATTCTCTACGTACTCTTCGTTGAGTTGACCAAGTCACTTGGCAATCAACCTGAAGGAGTCGCAGCCACGGTTAGCCGTCTCCGTCTTCTTCTCATTGGAACATGGGGCGTCTACCCAATGGTCATAGCTGTT YVDWILTVPLLLVEVIAVLALARQASKSLMNRLVPASAAMIILGYPGEISNVTSEKVIWGVLSTLPFLYILYVLFVELTKSLGNQPEGVAATVSRLRLLLIGTWGVYPMVIAV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTAGATTGG------------------------ATCCTCACCGTTCCGCTGTTGCTCGTCGAGGTAATTGCTGTTCTGGCTCTT---------GCC---CGCCAAGCTTCGAAG---TCACTG------------------------------------ATGAATCGT---CTTGTTCCTGCATCAGCAGCCATGATCATTCTCGGCTACCCAGGTGAA---------ATC------------------------------------------------------------------------------TCT---AACGTC---------ACC---------------------------AGCGAGAAG------------------GTAATTTGG---GGCGTCTTGTCGACCCTTCCATTCCTTTACATTCTCTACGTACTC---------------TTC------GTT---GAGTTGACCAAGTCACTTGGCAATCAA---------------CCTGAAGGAGTC---GCA---GCC---ACG---GTT---AGC---CGTCTC---CGTCTTCTTCTCATTGGA---------------------------------------------------------------ACATGG---------GGCGTCTACCCAATGGTCATAGCTGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------ILTVPLLLVEVIAVLAL---A-RQASK-SL------------MNR-LVPASAAMIILGYPGE---I--------------------------S-NV---T---------SEK------VIW-GVLSTLPFLYILYVL-----F--V-ELTKSLGNQ-----PEGV-A-A-T-V-S-RL-RLLLIG---------------------TW---GVYPMVIAV--------------------------------------------------------------------------------------------- [Actinorhodopsin]_ATIA01000023 [Actinorhodopsin] Leifsonia_rubra_CMS76R_ATIA01000023 gi|523623787|gb|ATIA01000023| Leifsonia rubra CMS 76R Leifsonia rubra contig 3, whole genome shotgun sequence Leifsonia rubra CMS 76R Leifsonia rubra contig 3, whole genome shotgun sequence ATIA01000023 [[other rhodopsin/root Actinorhodopsin-like cluster]] other rhodopsin root Actinorhodopsin-like cluster actinorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Actinobacteria/Actinobacteridae/Actinomycetales/Micrococcineae/Microbacteriaceae/Leifsonia] taxon:1348338 genomic_DNA strain 15-juil-13 #na Antarctica_Wright_Valley/McMurdo Antarctic Ocean marine -77.478259 161.809496 Draft Genome Sequence of Leifsonia rubra Strain CMS 76RT, Isolated from a Cyanobacterial Mat Sample from a Pond in Wright Valley, McMurdo, Antarctica Kumar Pinnaka,A., Singh,A., Ara,S., Begum,Z., Reddy,G.S. and Shivaji,S. Genome Announc 1 (4), e0063313 (2013) 23950134 #na ATGATTCCTGACACCCTGACACAGGGACAGTACGACACCGTCTACAACATGCTTTCCCTCGTGATCGCTTCACAGCTGTTCACCGCTGTGTTCCTGGTGATCGCAATGCCGAGAATTCTGCCTCGTTACCGGCAGGCAATCACGGTAGCGATCGTGGTCTGCGGAATTGCCGCCTACCACTACTTCCGAATCTTCGATTCCTTCAAGGAAGCATTCGTATCTGACGCCGTCGGCGGCGCCGGAGTCTACACACAGGCTGTCGGGGCATCCTTCAACGAAGGTTACCGATACGTCGACTGGCTTCTGACGGTGCCGTTGCTGCTGCTCGAACTCATCGCAATTCTCGCACTCGCCCGCAAGGTGCAAACCAGCCTGCTGCTGCGCCTGCTGCCCGCTGCCGCTCTGATGATTATTCTCGGATACCCGGGAGAGATGAGCGACGACAACATGGTTCGCGGAATTTTCGGACTCCTGTCGAGCATTCCGTTCGCATATATCCTCTTCGTCCTGTTCGCTCAGCTGACGAAGTCGCTCGCCAATCAGCCCGTCTCAGTGCGCCGGACACTCAGCCAGCTTCGCTGGCTGATCCTCCTCAGCTGGGGCTTCTACCCGATTGCGTTCCTGCTCCCCATCCTGAACATCGAAGGTTCCAACGCGTGGGTTGCCATGCAAGTCGGATACTCGGTAGCAGACATCCTCGCAAAGGCCGTCTACGCCCTGATCATCTTCTACGTGGCCCGGATGAAGTCCTACGATGATGACCCCGAGTTCGCGCTTCGGGAGAACTCCAAGGAAGACGCCGCAGTCTACGCTAGAAGG MIPDTLTQGQYDTVYNMLSLVIASQLFTAVFLVIAMPRILPRYRQAITVAIVVCGIAAYHYFRIFDSFKEAFVSDAVGGAGVYTQAVGASFNEGYRYVDWLLTVPLLLLELIAILALARKVQTSLLLRLLPAAALMIILGYPGEMSDDNMVRGIFGLLSSIPFAYILFVLFAQLTKSLANQPVSVRRTLSQLRWLILLSWGFYPIAFLLPILNIEGSNAWVAMQVGYSVADILAKAVYALIIFYVARMKSYDDDPEFALRENSKEDAAVYARR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGATTCCTGACACCCTGACACAGGGACAGTACGACACCGTCTACAACATGCTTTCCCTCGTGATCGCTTCACAGCTGTTCACCGCTGTGTTCCTGGTGATCGCAATGCCGAGAATTCTGCCTCGTTACCGGCAGGCAATCACGGTAGCGATCGTGGTCTGCGGAATTGCCGCCTACCACTACTTCCGAATCTTCGATTCCTTCAAGGAAGCATTCGTATCTGACGCCGTCGGCGGCGCCGGAGTCTACACACAGGCTGTCGGGGCATCCTTCAACGAAGGTTACCGATACGTCGACTGG------------------------CTTCTGACGGTGCCGTTGCTGCTGCTCGAACTCATCGCAATTCTCGCACTC---------GCC---CGCAAGGTGCAAACC---AGCCTG------------------------------------CTGCTGCGC---CTGCTGCCCGCTGCCGCTCTGATGATTATTCTCGGATACCCGGGAGAG---------ATG------------------------------------------------------------------------------AGC---GACGAC---------AAC---------------------------ATGGTTCGC------------------GGAATTTTC---GGACTCCTGTCGAGCATTCCGTTCGCATATATCCTCTTCGTCCTG---------------TTC------GCT---CAGCTGACGAAGTCGCTCGCCAATCAG---------------CCCGTCTCAGTG---CGC---CGG---ACA---CTC---AGC---CAGCTT---CGCTGGCTGATCCTCCTC---------------------------------------------------------------AGCTGG---------GGCTTCTACCCGATTGCGTTCCTGCTCCCCATCCTGAACATCGAAGGT---------------TCCAACGCGTGGGTTGCCATGCAAGTCGGATACTCGGTAGCAGACATCCTCGCAAAGGCCGTCTACGCCCTGATCATCTTCTACGTGGCCCGGATGAAGTCCTACGATGATGACCCCGAGTTCGCGCTTCGGGAGAACTCCAAGGAAGACGCCGCAGTCTACGCTAGAAGG------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------MIPDTLTQGQYDTVYNMLSLVIASQLFTAVFLVIAMPRILPRYRQAITVAIVVCGIAAYHYFRIFDSFKEAFVSDAVGGAGVYTQAVGASFNEGYRYVDW--------LLTVPLLLLELIAILAL---A-RKVQT-SL------------LLR-LLPAAALMIILGYPGE---M--------------------------S-DD---N---------MVR------GIF-GLLSSIPFAYILFVL-----F--A-QLTKSLANQ-----PVSV-R-R-T-L-S-QL-RWLILL---------------------SW---GFYPIAFLLPILNIEG-----SNAWVAMQVGYSVADILAKAVYALIIFYVARMKSYDDDPEFALRENSKEDAAVYARR------------------------ [other-rhodopsin]_NC_009523 [other-rhodopsin] Roseiflexus_sp_RS_1_genome_NC_009523 gi|148654188|gb|NC_009523| Roseiflexus sp RS1 chromosome, complete genome Roseiflexus sp RS1 chromosome, complete genome NC_009523 [[other rhodopsin]] other rhodopsin xanthorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Chloroflexi/Chloroflexales/Chloroflexaceae/Roseiflexus] taxon:357808 genomic_DNA strain 10-juin-13 #na #na other freshwater 44.533845 -110.797401 Complete sequence of Roseiflexus sp. RS1 Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Chertkov,O., Brettin,T., Bruce,D., Han,C., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Mikhailova,N., Bryant,D. and Richardson,P. Unpublished #na #na ATGCCAAACCTTACGCTATCTCAGTATGACCTGGTTTACAACGCGCTATCGTTCACCATCGCGGCGATGGGCGCGGCGTTCGTATTTTTCTTGCTCGCGCGCAACACCGTAGCATCCACCTATCAGCGCGCGATGGTGCTCGCAGCAATCATCGTCGGGATTGCTGCGTATCATTATGTACGGATGTTTACCAGCTGGAGCACAGCCTTCACCGTCAGCGGCGCGATCTACACGCCTACTGGCGAGCCGTTCAATGAAGCATACCGTTATGCCGATTGGCTCCTGACCGTCCCGCTCTTGCTCGTCGAGCTCGTCGCGGTTCTGCATATCACGGGACAGCAGCGCAGTGGGATGATCGCGCGGTTGGTGATTGCAGCAGTGTTGATGATCGTGTTGGGCTACCCTGGCGAGATTTCGTCAGACGTTACCACGCGGCTTGTGTGGGGCACGCTGAGCAGTATCCCATTCCTCTACATTCTGTATGTGCTCTGGCGCGATCTGGGTGCAGTGATGGAGCGTGAATCAGCAGAAGTACGGGTTCTGCTGCGGAATCTGCGCCTGCTCCTGCTCGCAAGCTGGGGAGTGTATCCGATCGCATACCTGCTGCCGCTCCTGAGTATTGACCCGGCGACTGCGCTGGTTGCGCGTCAGGTCGGATACTCGATCGCTGATATTGTGGCGAAGCCGGCCTATGGTCTGTTGATCTACGCGATCGCACGAATCAAGACCCAACAAGAGCGAGGGGAGTCCTCTGAAGGGACGATCCCAGCCATTGCG MPNLTLSQYDLVYNALSFTIAAMGAAFVFFLLARNTVASTYQRAMVLAAIIVGIAAYHYVRMFTSWSTAFTVSGAIYTPTGEPFNEAYRYADWLLTVPLLLVELVAVLHITGQQRSGMIARLVIAAVLMIVLGYPGEISSDVTTRLVWGTLSSIPFLYILYVLWRDLGAVMERESAEVRVLLRNLRLLLLASWGVYPIAYLLPLLSIDPATALVARQVGYSIADIVAKPAYGLLIYAIARIKTQQERGESSEGTIPAIA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCCAAACCTTACGCTATCTCAGTATGACCTGGTTTACAACGCGCTATCGTTCACCATCGCGGCGATGGGCGCGGCGTTCGTATTTTTCTTGCTCGCGCGCAACACCGTAGCATCCACCTATCAGCGCGCGATGGTGCTCGCAGCAATCATCGTCGGGATTGCTGCGTATCATTATGTACGGATGTTTACCAGCTGGAGCACAGCCTTCACC---------------GTCAGCGGCGCGATCTACACGCCTACTGGCGAGCCGTTCAATGAAGCATACCGTTATGCCGATTGG------------------------CTCCTGACCGTCCCGCTCTTGCTCGTCGAGCTCGTCGCGGTTCTGCATATC---------ACG---GGACAGCAGCGCAGT---GGGATG------------------------------------ATCGCGCGG---TTGGTGATTGCAGCAGTGTTGATGATCGTGTTGGGCTACCCTGGCGAG---------ATT------------------------------------------------------------------------------TCG---TCAGAC---------GTT---------------------------ACCACGCGG------------------CTTGTGTGG---GGCACGCTGAGCAGTATCCCATTCCTCTACATTCTGTATGTGCTC---------------TGG------CGC---GATCTGGGTGCAGTGATGGAGCGTGAA---------------TCAGCAGAAGTA---CGG---GTT---CTG---CTG---CGG---AATCTG---CGCCTGCTCCTGCTCGCA---------------------------------------------------------------AGCTGG---------GGAGTGTATCCGATCGCATACCTGCTGCCGCTCCTGAGTATTGACCCG---------------GCGACTGCGCTGGTTGCGCGTCAGGTCGGATACTCGATCGCTGATATTGTGGCGAAGCCGGCCTATGGTCTGTTGATCTACGCGATCGCACGAATCAAGACCCAACAAGAGCGAGGGGAGTCCTCTGAAGGGACGATCCCAGCCATTGCG--------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------MPNLTLSQYDLVYNALSFTIAAMGAAFVFFLLARNTVASTYQRAMVLAAIIVGIAAYHYVRMFTSWSTAFT-----VSGAIYTPTGEPFNEAYRYADW--------LLTVPLLLVELVAVLHI---T-GQQRS-GM------------IAR-LVIAAVLMIVLGYPGE---I--------------------------S-SD---V---------TTR------LVW-GTLSSIPFLYILYVL-----W--R-DLGAVMERE-----SAEV-R-V-L-L-R-NL-RLLLLA---------------------SW---GVYPIAYLLPLLSIDP-----ATALVARQVGYSIADIVAKPAYGLLIYAIARIKTQQERGESSEGTIPAIA------------------------------- [other-rhodopsin]_FJ545156 [other-rhodopsin] clone_Superior_LGR_F1_rhodopsin_gene_partial_cds_FJ545156 gi|224383987|gb|FJ545156| Uncultured microorganism clone Superior.LGR.F1 putative rhodopsin gene, partial cds. Uncultured microorganism clone Superior.LGR.F1 putative rhodopsin gene, partial cds. FJ545156 [[other rhodopsin]] other rhodopsin xanthorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juin-05 Lake Superior other freshwater 47.3 -91.67 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na CTGACCGTTCCGCTGTTGTTGGTCGAATTGGTCGCAGTGTTGCACCTATCCAAGGCTGTCGGCCGGAGCCTGTTGATCAAGCTCATCATCGCTGCAGTCCTGATGATTGGACTCGGGTACCCCGGCGAAGCAGAGTACACCAACTTGACGATGCGCGCCGTTTGGGGCACGTTGAGCAGCATTCCGTTTGTGTACATTTTGTATGTACTCTGGGTGCAACTCGGGGCACAGGTCAAAAACGAAAGTGCCGCGGTACAAAGCTTGCTCAAGACCACGCGCGTTGTCCTCTTGGCAACC LTVPLLLVELVAVLHLSKAVGRSLLIKLIIAAVLMIGLGYPGEAEYTNLTMRAVWGTLSSIPFVYILYVLWVQLGAQVKNESAAVQSLLKTTRVVLLAT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGACCGTTCCGCTGTTGTTGGTCGAATTGGTCGCAGTGTTGCACCTA---------TCC---AAGGCTGTCGGCCGG---AGCCTG------------------------------------TTGATCAAG---CTCATCATCGCTGCAGTCCTGATGATTGGACTCGGGTACCCCGGCGAA---------GCA------------------------------------------------------------------------------GAGTACACCAAC---------TTG---------------------------ACGATGCGC------------------GCCGTTTGG---GGCACGTTGAGCAGCATTCCGTTTGTGTACATTTTGTATGTACTC---------------TGG------GTG---CAACTCGGGGCACAGGTCAAAAACGAA---------------AGTGCCGCGGTA---CAA---AGC---TTG---CTC---AAG---ACCACG---CGCGTTGTCCTCTTGGCA---------------------------------------------------------------ACC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTVPLLLVELVAVLHL---S-KAVGR-SL------------LIK-LIIAAVLMIGLGYPGE---A--------------------------EYTN---L---------TMR------AVW-GTLSSIPFVYILYVL-----W--V-QLGAQVKNE-----SAAV-Q-S-L-L-K-TT-RVVLLA---------------------T---------------------------------------------------------------------------------------------------------- [other-rhodopsin]_NC_007677 [other-rhodopsin] 83814055_1867709_1868530_Salinibacter_ruber_DSM_13855_Xanthorhodopsin_genome gi|83814055|gb|NC_007677| Salinibacter ruber DSM 13855 chromosome, complete genome Salinibacter ruber DSM 13855 chromosome, complete genome NC_007677 [[other rhodopsin]] other rhodopsin xanthorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Bacteroidetes/Bacteroidetes Order II. Incertae sedis/Rhodothermaceae/Salinibacter] taxon:309807 genomic_DNA strain 22-juil-13 #na #na other freshwater 39.7 3 #na #na #na #na #na ATGCTACAAGAACTTCCCACCCTGACGCCGGGCCAGTATAGCCTGGTGTTCAACATGTTCTCTTTCACCGTTGCGACCATGACGGCTTCCTTTGTGTTCTTCGTCCTGGCGCGCAACAACGTAGCGCCGAAGTACCGGATTTCGATGATGGTCTCGGCGCTGGTGGTCTTCATTGCCGGCTACCACTACTTCCGCATTACCAGCAGTTGGGAAGCCGCGTATGCCCTGCAGAATGGGATGTACCAGCCCACCGGTGAGCTATTTAACGACGCATACCGCTATGTGGACTGGCTCCTTACGGTGCCGCTGCTGACCGTAGAGTTGGTGCTCGTCATGGGCCTTCCGAAGAACGAGCGCGGTCCGTTGGCCGCGAAGCTTGGATTCCTGGCGGCCCTCATGATCGTGCTCGGGTACCCCGGTGAGGTCAGTGAGAACGCGGCCCTCTTCGGAACCCGCGGTCTCTGGGGCTTCCTGAGCACCATTCCGTTCGTTTGGATCCTGTACATCCTCTTCACCCAGTTGGGTGATACGATTCAGCGGCAGAGCAGTCGCGTGTCGACGCTTCTCGGCAACGCCCGGCTGCTGCTGCTGGCCACCTGGGGCTTCTACCCGATTGCGTACATGATCCCGATGGCATTCCCTGAGGCGTTCCCGAGCAACACCCCGGGAACCATCGTGGCCCTTCAGGTCGGATACACGATCGCGGACGTTCTCGCGAAGGCCGGATACGGCGTGCTTATCTACAACATCGCCAAGGCCAAGTCCGAAGAGGAAGGCTTCAACGTCAGTGAGATGGTGGAGCCGGCCACGGCCAGTGCG MLQELPTLTPGQYSLVFNMFSFTVATMTASFVFFVLARNNVAPKYRISMMVSALVVFIAGYHYFRITSSWEAAYALQNGMYQPTGELFNDAYRYVDWLLTVPLLTVELVLVMGLPKNERGPLAAKLGFLAALMIVLGYPGEVSENAALFGTRGLWGFLSTIPFVWILYILFTQLGDTIQRQSSRVSTLLGNARLLLLATWGFYPIAYMIPMAFPEAFPSNTPGTIVALQVGYTIADVLAKAGYGVLIYNIAKAKSEEEGFNVSEMVEPATASA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTACAAGAACTTCCCACCCTGACGCCGGGCCAGTATAGCCTGGTGTTCAACATGTTCTCTTTCACCGTTGCGACCATGACGGCTTCCTTTGTGTTCTTCGTCCTGGCGCGCAACAACGTAGCGCCGAAGTACCGGATTTCGATGATGGTCTCGGCGCTGGTGGTCTTCATTGCCGGCTACCACTACTTCCGCATTACCAGCAGTTGGGAAGCCGCGTATGCC---------------CTGCAGAATGGGATGTACCAGCCCACCGGTGAGCTATTTAACGACGCATACCGCTATGTGGACTGG------------------------CTCCTTACGGTGCCGCTGCTGACCGTAGAGTTGGTGCTCGTCATGGGCCTT---------CCG---AAGAACGAGCGCGGT---CCGTTG------------------------------------GCCGCGAAG---CTTGGATTCCTGGCGGCCCTCATGATCGTGCTCGGGTACCCCGGTGAG---------GTC------------------------------------------------------------------------------AGT---GAGAACGCGGCCCTCTTC---------------------------GGAACCCGC------------------GGTCTCTGG---GGCTTCCTGAGCACCATTCCGTTCGTTTGGATCCTGTACATCCTC---------------TTC------ACC---CAGTTGGGTGATACGATTCAGCGGCAG---------------AGCAGTCGCGTG---TCG---ACG---CTT---CTC---GGC---AACGCC---CGGCTGCTGCTGCTGGCC---------------------------------------------------------------ACCTGG---------GGCTTCTACCCGATTGCGTACATGATCCCGATGGCATTCCCTGAGGCGTTCCCGAGCAACACCCCGGGAACCATCGTGGCCCTTCAGGTCGGATACACGATCGCGGACGTTCTCGCGAAGGCCGGATACGGCGTGCTTATCTACAACATCGCCAAGGCCAAGTCCGAAGAGGAAGGCTTCAACGTCAGTGAGATGGTGGAGCCGGCCACGGCCAGTGCG--------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------MLQELPTLTPGQYSLVFNMFSFTVATMTASFVFFVLARNNVAPKYRISMMVSALVVFIAGYHYFRITSSWEAAYA-----LQNGMYQPTGELFNDAYRYVDW--------LLTVPLLTVELVLVMGL---P-KNERG-PL------------AAK-LGFLAALMIVLGYPGE---V--------------------------S-ENAALF---------GTR------GLW-GFLSTIPFVWILYIL-----F--T-QLGDTIQRQ-----SSRV-S-T-L-L-G-NA-RLLLLA---------------------TW---GFYPIAYMIPMAFPEAFPSNTPGTIVALQVGYTIADVLAKAGYGVLIYNIAKAKSEEEGFNVSEMVEPATASA----------------------------- [NQ-rhodopsin]_NZ_ADAE01000004 [NQ-rhodopsin] 296120208_41575_42486_Citromicrobium_bathyomarinum_JL354_NZ_ADAE01000004_NQ_rhodopsin_WGS gi|296120208|gb|NZ_ADAE01000004| Citromicrobium bathyomarinum JL354 NZ ADAE01000004, whole genome shotgun sequence Citromicrobium bathyomarinum JL354 NZ ADAE01000004, whole genome shotgun sequence NZ_ADAE01000004 [[other rhodopsin/NQrhodopsin cluster]] other rhodopsin NQrhodopsin cluster NQ rhodopsin sodium pump N97 ; Q108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Alphaproteobacteria/Sphingomonadales/Sphingomonadaceae/Citromicrobium] taxon:685035 genomic_DNA strain 12-May-2013 #na #na China Sea marine 15.5 114.4 #na #na #na #na #na ATGGCTGCCCCGATCGCCGATCCCACTGTTGCAGAGCCGCAGATTGCTCAGGCCGACGCAGCGATCTCGGCCATAGAGAACCTCGTCACCCTGACCAGTCAGCAGTACCATCTGGGTTCGTTAATCCTTATGGTTAGTTACGCGGCGTTCTTCGCGTTCATTCTGTTCTTCCTGATGAGCGTGCAGAACCTCGCACCGCGTTATCGGCTGGTGCCGATTCTCTCGGCGGTGGTGATGGCGAGCGCGGGGCTGACCCTGCTGCAGGAATTCGGGCTGTGGAAGGAGAGCTATGCCTACGTCGACGGTCTGTATCGCCCGCTGGCGCAGAACGACAGCTTCTCCAACGCCTATCGCTACGGCAACTGGACGATCACCGTGCCGATCCTGCTGGCTCAGCTGGCGATCGCGATGGGGCTTCGCCAGGCGGAGGTGCATCGGCGCGCGCTGCGCATGGCGGTGCCCGGCGTACTGATGATCTGGACCGGCCTCTACGGCCAGTTCGGCGCGGTTGGCGATTTCTCGCATCTTAACCTGTGGGGTGTGATTTCGTCGATCTTCTTCCTGTGGCTGATCCTGGAAGTGCGCCAGACGCTGATCGCGGGGCTGGCGACGACGCCCGACATCCTGAAATCCTGGCCCAGCAACCTGTGGTGGTTCTTCCTCGCCAGCTGGGGCCTCTATCCGCTTGCCTATGCCCTGCCGCAGCTTGGCGCGACGGGCGATCTGGTGGTTGCGCGTCAGGCGATCTATTCCTTCGCCGATATTGCTTCCAAGCTGATCTACGGCATCATTCTCGCCCGCTTCGTCCTGCGGCGCAGCGCCTTCGAGGGCTATATGCCCGCCGCCGAAGCGCTCGCCCCCACGCCGGACAAGCCCAATACCGGCGGGCCCGGATTACGACGCGCTCCC MAAPIADPTVAEPQIAQADAAISAIENLVTLTSQQYHLGSLILMVSYAAFFAFILFFLMSVQNLAPRYRLVPILSAVVMASAGLTLLQEFGLWKESYAYVDGLYRPLAQNDSFSNAYRYGNWTITVPILLAQLAIAMGLRQAEVHRRALRMAVPGVLMIWTGLYGQFGAVGDFSHLNLWGVISSIFFLWLILEVRQTLIAGLATTPDILKSWPSNLWWFFLASWGLYPLAYALPQLGATGDLVVARQAIYSFADIASKLIYGIILARFVLRRSAFEGYMPAAEALAPTPDKPNTGGPGLRRAP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGCTGCCCCGATCGCCGATCCCACTGTTGCAGAGCCGCAGATTGCTCAGGCCGACGCAGCG------------ATCTCGGCCATAGAGAACCTCGTCACCCTGACCAGTCAGCAGTACCATCTGGGTTCGTTAATCCTTATGGTTAGTTACGCGGCGTTCTTCGCGTTCATTCTGTTCTTCCTGATGAGCGTGCAGAACCTCGCACCGCGTTATCGGCTGGTGCCGATTCTCTCGGCGGTGGTGATGGCGAGCGCGGGGCTGACCCTGCTGCAGGAATTCGGGCTGTGGAAG---GAGAGCTATGCCTACGTCGAC------GGTCTGTATCGCCCGCTGGCGCAGAACGACAGCTTCTCCAACGCCTATCGCTACGGCAACTGG------------------------ACGATCACCGTGCCGATCCTGCTGGCTCAGCTGGCGATCGCGATGGGGCTT---------CGC---CAGGCGGAGGTGCAT---CGGCGC------------------------------------GCGCTGCGC---ATGGCGGTGCCCGGCGTACTGATGATCTGGACCGGCCTCTACGGCCAG---------TTC------------------------------------------------------------------------GGCGCGGTT---GGCGAT---------TTC---------------------------TCGCATCTT------------------AACCTGTGG---GGTGTGATTTCGTCGATCTTCTTCCTGTGGCTGATCCTGGAAGTG------------------------CGCCAGACGCTGATCGCGGGGCTGGCGACGACG---------------CCCGACATCCTG---AAA---TCC---TGG---CCC---AGC---AACCTG---TGGTGGTTCTTCCTCGCC---------------------------------------------------------------AGCTGG---------GGCCTCTATCCGCTTGCCTATGCCCTGCCGCAGCTTGGCGCGACGGGC------------------GATCTGGTGGTTGCGCGTCAGGCGATCTATTCCTTCGCCGATATTGCTTCCAAGCTGATCTACGGCATCATTCTCGCCCGCTTCGTCCTGCGGCGCAGCGCCTTCGAGGGCTATATGCCCGCCGCCGAAGCGCTCGCCCCCACGCCG---------GACAAGCCCAATACCGGCGGGCCCGGATTACGACGCGCTCCC------------------------------------------ ------------------------------------------------------------------------------------MAAPIADPTVAEPQIAQADAA----ISAIENLVTLTSQQYHLGSLILMVSYAAFFAFILFFLMSVQNLAPRYRLVPILSAVVMASAGLTLLQEFGLWK-ESYAYVD--GLYRPLAQNDSFSNAYRYGNW--------TITVPILLAQLAIAMGL---R-QAEVH-RR------------ALR-MAVPGVLMIWTGLYGQ---F------------------------GAV-GD---F---------SHL------NLW-GVISSIFFLWLILEV--------RQTLIAGLATT-----PDIL-K-S-W-P-S-NL-WWFFLA---------------------SW---GLYPLAYALPQLGATG------DLVVARQAIYSFADIASKLIYGIILARFVLRRSAFEGYMPAAEALAPTP---DKPNTGGPGLRRAP-------------- [NQ-rhodopsin]_NZ_AEUE01000008 [NQ-rhodopsin] 341575923_195787_196710_Citromicrobium_sp_JLT1363_contig00008_NQ_rhodopsin_WGS gi|341575923|gb|NZ_AEUE01000008| Citromicrobium sp JLT1363 contig00008, whole genome shotgun sequence Citromicrobium sp JLT1363 contig00008, whole genome shotgun sequence NZ_AEUE01000008 [[other rhodopsin/NQrhodopsin cluster]] other rhodopsin NQrhodopsin cluster NQ rhodopsin sodium pump N97 ; Q108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Alphaproteobacteria/Sphingomonadales/Sphingomonadaceae/Citromicrobium] taxon:517722 genomic_DNA strain 12-May-2013 #na #na China Sea marine 15.5 114.4 #na #na #na #na #na ATGGTTGCCCCGATTACTGACAATACGGTCGTTTCCCCGCCAATTCCGGAGGTAAACACCGCGCTGGCCAACCAGCTCGGCAATATCGAGAACGTCGTTACCCTTACCATGCAGCAATACACGCTGGGATCGCTGATCCTGATGGTGAGCTACGGGGCCTGTTTCGCCTTCATCCTGTTCTTCCTGATGAGCGTGCAGAACCTCGCCCCGCGCTATCGGCTGGTGCCGATCCTGTCCGCGGTCGTCATGGCGAGCGCCGGGCTCAGCCTGCTGCAGGAATTCAGCCTGTGGAAGGACAGCTACGCGTTCGTCGACGGCCTCTACCGTCCGCTGGCCGAGAACGAGACCTTCACCAATGCCTATCGCTACGGCAACTGGACGATCACCGTGCCGATCCTGCTGACGCAGCTCGCCATCGCCATGGGGCTGCGGCAGGGGGAAATTCAGCGCCGTTCGCTGCGGATGGGTGTTCCGGCCGTGCTGATGATCTGGACCGGGCTGTATGGCCAGTTCGGCGAGGTCGGCGATTTCTCGCACCTCAACCTGTGGGGCGTCGTTTCCTCGATCTTCTTCCTGTGGCTGATACTCGAAGTGCGCCAGACGCTGATCGCGGGGATCAGCAGCACGCCCGACATCCTGAAGCCCTGGCCCAACAACCTGTGGTGGTTCTTCTTGGCGACCTGGGGCCTGTACCCGATCGCCTATGCGCTGCCGCAGCTGGGCGCCACGGCGGAAATCGTGATTGCGCGCCAGGGGATCTATTCGCTCGCCGATATTGCTTCCAAGCTGATCTACGGCATCATCCTTGCCCGCTTCGTGCTTCGCCGCAGCGCTTACGAGGGGTACATGCCCGCAGCCGAGGCGCTGGCTTCCGCCCCGGAGAAGCCGAATACCGGCGGCCCCGGGCTGCGCCGCGCACCT MVAPITDNTVVSPPIPEVNTALANQLGNIENVVTLTMQQYTLGSLILMVSYGACFAFILFFLMSVQNLAPRYRLVPILSAVVMASAGLSLLQEFSLWKDSYAFVDGLYRPLAENETFTNAYRYGNWTITVPILLTQLAIAMGLRQGEIQRRSLRMGVPAVLMIWTGLYGQFGEVGDFSHLNLWGVVSSIFFLWLILEVRQTLIAGISSTPDILKPWPNNLWWFFLATWGLYPIAYALPQLGATAEIVIARQGIYSLADIASKLIYGIILARFVLRRSAYEGYMPAAEALASAPEKPNTGGPGLRRAP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTTGCCCCGATTACTGACAATACGGTCGTTTCCCCGCCAATTCCGGAGGTAAACACCGCGCTGGCCAACCAGCTCGGCAATATCGAGAACGTCGTTACCCTTACCATGCAGCAATACACGCTGGGATCGCTGATCCTGATGGTGAGCTACGGGGCCTGTTTCGCCTTCATCCTGTTCTTCCTGATGAGCGTGCAGAACCTCGCCCCGCGCTATCGGCTGGTGCCGATCCTGTCCGCGGTCGTCATGGCGAGCGCCGGGCTCAGCCTGCTGCAGGAATTCAGCCTGTGGAAG---GACAGCTACGCGTTCGTCGAC------GGCCTCTACCGTCCGCTGGCCGAGAACGAGACCTTCACCAATGCCTATCGCTACGGCAACTGG------------------------ACGATCACCGTGCCGATCCTGCTGACGCAGCTCGCCATCGCCATGGGGCTG---------CGG---CAGGGGGAAATTCAG---CGCCGT------------------------------------TCGCTGCGG---ATGGGTGTTCCGGCCGTGCTGATGATCTGGACCGGGCTGTATGGCCAG---------TTC------------------------------------------------------------------------GGCGAGGTC---GGCGAT---------TTC---------------------------TCGCACCTC------------------AACCTGTGG---GGCGTCGTTTCCTCGATCTTCTTCCTGTGGCTGATACTCGAAGTG------------------------CGCCAGACGCTGATCGCGGGGATCAGCAGCACG---------------CCCGACATCCTG---AAG---CCC---TGG---CCC---AAC---AACCTG---TGGTGGTTCTTCTTGGCG---------------------------------------------------------------ACCTGG---------GGCCTGTACCCGATCGCCTATGCGCTGCCGCAGCTGGGCGCCACGGCG------------------GAAATCGTGATTGCGCGCCAGGGGATCTATTCGCTCGCCGATATTGCTTCCAAGCTGATCTACGGCATCATCCTTGCCCGCTTCGTGCTTCGCCGCAGCGCTTACGAGGGGTACATGCCCGCAGCCGAGGCGCTGGCTTCCGCCCCG---------GAGAAGCCGAATACCGGCGGCCCCGGGCTGCGCCGCGCACCT------------------------------------------ ------------------------------------------------------------------------------------MVAPITDNTVVSPPIPEVNTALANQLGNIENVVTLTMQQYTLGSLILMVSYGACFAFILFFLMSVQNLAPRYRLVPILSAVVMASAGLSLLQEFSLWK-DSYAFVD--GLYRPLAENETFTNAYRYGNW--------TITVPILLTQLAIAMGL---R-QGEIQ-RR------------SLR-MGVPAVLMIWTGLYGQ---F------------------------GEV-GD---F---------SHL------NLW-GVVSSIFFLWLILEV--------RQTLIAGISST-----PDIL-K-P-W-P-N-NL-WWFFLA---------------------TW---GLYPIAYALPQLGATA------EIVIARQGIYSLADIASKLIYGIILARFVLRRSAYEGYMPAAEALASAP---EKPNTGGPGLRRAP-------------- [NQ-rhodopsin]_NZ_DS022272 [NQ-rhodopsin] 211594571_330898_331788_Fulvimarina_pelagi_HTCC2506_scf_1100011000323_NQ_rhodopsin_WGS gi|211594571|gb|NZ_DS022272| Fulvimarina pelagi HTCC2506 scf 1100011000323 genomic scaffold, whole genome shotgun sequence Fulvimarina pelagi HTCC2506 scf 1100011000323 genomic scaffold, whole genome shotgun sequence NZ_DS022272 [[other rhodopsin/NQrhodopsin cluster]] other rhodopsin NQrhodopsin cluster NQ rhodopsin sodium pump N97 ; Q108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Alphaproteobacteria/Rhizobiales/Aurantimonadaceae/Fulvimarina] taxon:314231 genomic_DNA strain 30-juin-13 #na #na Arctic Ocean marine 71.4 -156.8 #na #na #na #na #na ATGCAAGATACCGAGTTATTCGCTGACCAGTTGGGCAACATTGAAAACCTCGTTTCCCTCACGGTCGGTCAGTACACGATGGGTTCGCTCATCCTTATGGTGAGCTACGGTGCGCATTTCGCCTTCGTGCTGTATTTCCTGATGACTTCGCTTCAGCTGGCGCCGCGCTATCGGATCGTTCCGATCATGTCCGCGATCGTTATGGTCTCGGCCGGTCTTTCGTTGCTGCGCGAGTTCAACGCTTGGGAGCAAAGCTACGAGTTCGTCGAAGGAATGTACCAGCCTCTGGCTGAAAACTCGACTTTCACCAACGCTTATCGTTACGGCAACTGGACCATTACTGTCCCTATCCTTCTGACCCAACTGCCGTTGGCATTCGGGCTCCTTCGTCCCGAGTTGCACGTCAGAGCTGCCCGGATGTGCATTCCAGCACTTCTGATGATCTGGACGGGGCTGGTCGGCCAGTTCGGTGAAACAGGCAACTATTTGCGTTTGAACGTCTGGGGAGTCATCTCCACCATCTTCTTCGTTTGGCTCATTATCGAGGTGCGCGGCGTCATCAGCCGAGCGATCGCCATGGGGCCGGCCGAACTCGCGGCGTGGCCAAAAAATATTTGGTGGTTCTTTCTCGCGTTCTGGGGGCTTTACCCAATCGCCTACGCTCTCCCACAGCTGGGTCACACGGGGGACATCGTGGTCATCCGTCAACTTCTCTATTCCATTGCCGACGTCTTCTCGAAGCTTGTCTATGGCATCATTCTCTCGCGTTACGTTCTTCGGAGAAGTGCGTTGGAAGGCTATAAACCCGCCATCGAAGCTCTGTCGCGAACGCCAGTCGACTTGTCGATGTCCAAGAATGGTGGCGCCGGTTATGGTGATGGTGACCGC MQDTELFADQLGNIENLVSLTVGQYTMGSLILMVSYGAHFAFVLYFLMTSLQLAPRYRIVPIMSAIVMVSAGLSLLREFNAWEQSYEFVEGMYQPLAENSTFTNAYRYGNWTITVPILLTQLPLAFGLLRPELHVRAARMCIPALLMIWTGLVGQFGETGNYLRLNVWGVISTIFFVWLIIEVRGVISRAIAMGPAELAAWPKNIWWFFLAFWGLYPIAYALPQLGHTGDIVVIRQLLYSIADVFSKLVYGIILSRYVLRRSALEGYKPAIEALSRTPVDLSMSKNGGAGYGDGDR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCAAGATACCGAGTTATTCGCTGACCAGTTGGGCAACATTGAAAACCTCGTTTCCCTCACGGTCGGTCAGTACACGATGGGTTCGCTCATCCTTATGGTGAGCTACGGTGCGCATTTCGCCTTCGTGCTGTATTTCCTGATGACTTCGCTTCAGCTGGCGCCGCGCTATCGGATCGTTCCGATCATGTCCGCGATCGTTATGGTCTCGGCCGGTCTTTCGTTGCTGCGCGAGTTCAACGCTTGGGAG---CAAAGCTACGAGTTCGTCGAA------GGAATGTACCAGCCTCTGGCTGAAAACTCGACTTTCACCAACGCTTATCGTTACGGCAACTGG------------------------ACCATTACTGTCCCTATCCTTCTGACCCAACTGCCGTTGGCATTCGGGCTC---------CTT---CGTCCCGAGTTGCAC---GTCAGA------------------------------------GCTGCCCGG---ATGTGCATTCCAGCACTTCTGATGATCTGGACGGGGCTGGTCGGCCAG---------TTC------------------------------------------------------------------------GGTGAAACA---GGCAAC---------TAT---------------------------TTGCGTTTG------------------AACGTCTGG---GGAGTCATCTCCACCATCTTCTTCGTTTGGCTCATTATCGAGGTG------------------------CGCGGCGTCATCAGCCGAGCGATCGCCATGGGG---------------CCGGCCGAACTC---GCG---GCG---TGG---CCA---AAA---AATATT---TGGTGGTTCTTTCTCGCG---------------------------------------------------------------TTCTGG---------GGGCTTTACCCAATCGCCTACGCTCTCCCACAGCTGGGTCACACGGGG------------------GACATCGTGGTCATCCGTCAACTTCTCTATTCCATTGCCGACGTCTTCTCGAAGCTTGTCTATGGCATCATTCTCTCGCGTTACGTTCTTCGGAGAAGTGCGTTGGAAGGCTATAAACCCGCCATCGAAGCTCTGTCGCGAACGCCAGTCGACTTGTCGATGTCCAAGAATGGTGGCGCCGGTTATGGTGATGGTGACCGC--------------------------------------- ---------------------------------------------------------------------------------------------------MQDTELFADQLGNIENLVSLTVGQYTMGSLILMVSYGAHFAFVLYFLMTSLQLAPRYRIVPIMSAIVMVSAGLSLLREFNAWE-QSYEFVE--GMYQPLAENSTFTNAYRYGNW--------TITVPILLTQLPLAFGL---L-RPELH-VR------------AAR-MCIPALLMIWTGLVGQ---F------------------------GET-GN---Y---------LRL------NVW-GVISTIFFVWLIIEV--------RGVISRAIAMG-----PAEL-A-A-W-P-K-NI-WWFFLA---------------------FW---GLYPIAYALPQLGHTG------DIVVIRQLLYSIADVFSKLVYGIILSRYVLRRSALEGYKPAIEALSRTPVDLSMSKNGGAGYGDGDR------------- [NQ-rhodopsin]_NC_015496 [NQ-rhodopsin] 332290650_582286_583128_Krokinobacter_sp_4H_3_7_5_NQ_rhodopsin_genome gi|332290650|gb|NC_015496| Krokinobacter sp 4H375 chromosome, complete genome Krokinobacter sp 4H375 chromosome, complete genome NC_015496 [[other rhodopsin/NQrhodopsin cluster]] other rhodopsin NQrhodopsin cluster NQ rhodopsin sodium pump N97 ; Q108 light-energy conversion (ion transport) Green (L105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Krokinobacter] taxon:983548 genomic_DNA strain 06-juil-13 #na #na Pacific Ocean marine 34.922603 138.399144 #na #na #na #na #na ATGACACAAGAACTAGGGAATGCCAATTTCGAAAATTTCATTGGAGCTACAGAAGGATTTTCTGAAATTGCTTATCAATTTACATCACATATTCTTACGTTAGGGTACGCAGTGATGCTTGCAGGATTACTATACTTTATTCTTACTATCAAAAACGTAGATAAAAAATTCCAAATGTCGAACATATTATCGGCTGTGGTAATGGTATCGGCATTTTTGCTATTATATGCTCAGGCACAAAACTGGACATCAAGTTTTACCTTTAATGAAGAAGTAGGAAGATATTTTTTAGATCCGAGTGGTGATCTATTTAATAACGGATATCGCTATCTCAACTGGCTCATCGATGTACCTATGCTTCTCTTTCAAATTCTATTTGTAGTAAGTTTAACTACTTCAAAATTTAGCTCTGTACGTAACCAATTCTGGTTTTCTGGTGCGATGATGATTATTACTGGGTACATTGGACAGTTTTATGAGGTAAGTAACTTGACTGCCTTTTTAGTATGGGGAGCTATTTCATCTGCTTTTTTCTTTCATATTTTATGGGTTATGAAGAAGGTAATTAATGAAGGAAAAGAGGGAATTTCCCCAGCAGGACAAAAAATACTTTCTAACATCTGGATCTTATTTTTAATCTCATGGTTCTTATATCCAGGAGCTTATTTAATGCCATACTTAACAGGAGTAGATGGATTTTTATACAGTGAAGACGGTGTGATGGCACGACAACTCGTATATACAATTGCAGATGTATGTTCTAAAGTAATATACGGTGTACTATTAGGTAACCTTGCAATTACACTAAGTAAAAACAAAGAGTTGGTTGAAGCAAATAGC MTQELGNANFENFIGATEGFSEIAYQFTSHILTLGYAVMLAGLLYFILTIKNVDKKFQMSNILSAVVMVSAFLLLYAQAQNWTSSFTFNEEVGRYFLDPSGDLFNNGYRYLNWLIDVPMLLFQILFVVSLTTSKFSSVRNQFWFSGAMMIITGYIGQFYEVSNLTAFLVWGAISSAFFFHILWVMKKVINEGKEGISPAGQKILSNIWILFLISWFLYPGAYLMPYLTGVDGFLYSEDGVMARQLVYTIADVCSKVIYGVLLGNLAITLSKNKELVEANS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGACACAAGAACTAGGGAATGCCAATTTCGAAAATTTCATTGGAGCTACAGAAGGATTTTCTGAAATTGCTTATCAATTTACATCACATATTCTTACGTTAGGGTACGCAGTGATGCTTGCAGGATTACTATACTTTATTCTTACTATCAAAAACGTAGATAAAAAATTCCAAATGTCGAACATATTATCGGCTGTGGTAATGGTATCGGCATTTTTGCTATTATATGCTCAGGCACAAAACTGGACA---TCAAGTTTTACCTTTAATGAAGAAGTAGGAAGATATTTTTTAGATCCGAGTGGTGATCTATTTAATAACGGATATCGCTATCTCAACTGG------------------------CTCATCGATGTACCTATGCTTCTCTTTCAAATTCTATTTGTAGTAAGTTTA---------ACT---ACTTCAAAATTTAGC---TCTGTA------------------------------------CGTAACCAA---TTCTGGTTTTCTGGTGCGATGATGATTATTACTGGGTACATTGGACAG---------TTT------------------------------------------------------------------------TATGAGGTA---AGTAAC---------TTG---------------------------ACTGCCTTT------------------TTAGTATGG---GGAGCTATTTCATCTGCTTTTTTCTTTCATATTTTATGGGTTATG------------------------AAGAAGGTAATTAATGAAGGAAAAGAGGGAATT---------------TCCCCAGCAGGA---CAA---AAA---ATA---CTT---TCT---AACATC---TGGATCTTATTTTTAATC---------------------------------------------------------------TCATGG---------TTCTTATATCCAGGAGCTTATTTAATGCCATACTTAACAGGAGTAGATGGATTTTTATACAGTGAAGACGGTGTGATGGCACGACAACTCGTATATACAATTGCAGATGTATGTTCTAAAGTAATATACGGTGTACTATTAGGTAACCTTGCAATTACACTAAGTAAAAACAAAGAGTTGGTTGAAGCAAATAGC--------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------MTQELGNANFENFIGATEGFSEIAYQFTSHILTLGYAVMLAGLLYFILTIKNVDKKFQMSNILSAVVMVSAFLLLYAQAQNWT-SSFTFNEEVGRYFLDPSGDLFNNGYRYLNW--------LIDVPMLLFQILFVVSL---T-TSKFS-SV------------RNQ-FWFSGAMMIITGYIGQ---F------------------------YEV-SN---L---------TAF------LVW-GAISSAFFFHILWVM--------KKVINEGKEGI-----SPAG-Q-K-I-L-S-NI-WILFLI---------------------SW---FLYPGAYLMPYLTGVDGFLYSEDGVMARQLVYTIADVCSKVIYGVLLGNLAITLSKNKELVEANS------------------------------------- [NQ-rhodopsin]_JH594606 [NQ-rhodopsin] Gillisia_limnaea_DSM_15749_Gilliscaffold_2_WGS_JH594606 gi|373869098|gb|JH594606| Gillisia limnaea DSM 15749 genomic scaffold Gilliscaffold 2, whole genome shotgun sequence Gillisia limnaea DSM 15749 genomic scaffold Gilliscaffold 2, whole genome shotgun sequence JH594606 [[other rhodopsin/NQrhodopsin cluster]] other rhodopsin NQrhodopsin cluster NQ rhodopsin sodium pump N97 ; Q108 light-energy conversion (ion transport) Green (L105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Gillisia] taxon:865937 genomic_DNA strain 08-AUG-2013 #na microbial_mats_in_Lake_Fryxel Antarctic Ocean freshwater -77.613983 163.184624 The Improved HighQuality Draft genome of Gillisia limnaea DSM 15749 Lucas,S., Copeland,A., Lapidus,A., Bruce,D., Goodwin,L., Pitluck,S., Peters,L., Mikhailova,N., Held,B., Kyrpides,N., Mavromatis,K., Detter,J.C., Han,C., Land,M., Hauser,L., Markowitz,V., Cheng,J.F., Hugenholtz,P., Woyke,T., Wu,D., Tindall,B., Pomrenke,H., Brambilla,E., Klenk,H.P. and Eisen,J.A. Unpublished #na #na ATGTTTGGCGATTTTAATCGAGTTGACAATCCAATTTTATCACTCTCGTATTTTAAAATACAATTGACAGGTATAGGCTTGTGTAGATTGCTTAAACCTTGTTTAAATTTTTCTAAAAACATTAAACATATTAAAAAATTTATTAAAATTAACGGAAACAAATTTGAAATAGATTATTTTGATATGACACAAGAATTAGGAAATGCCAATTTTGAAAACTTCATTGGAGCAACAGAAGGCTTCTCAGAAATTGCGTATCAGTTTACATCGCACATTCTTACATTAGGTTATGCGGTGATGCTCGCTGGATTGCTATATTTTATCCTGACGATTAAAAAAGTAGATAAAAAATATCAAATGTCCAATATATTATCTGCGGTGGTAATGGTTTCTGCATTTTTGCTTTTGTATGCGCAAGCCGAGAATTGGACCACAAGTTTTACTTTTGATATATCCAGAGGAAAGTATTTTTTAGAACCGAATGGTGATTTATTTAACAATGGATACCGTTACCTCAACTGGCTTATCGATGTACCGATGCTGCTTTTCCAGATTCTTTTCGTAGTAAGTCTTACAAAATCAAAATTTAGTTCTATACGTAATCAATTTTGGTTTTCTGGTGCGATGATGATTATTACAGGTTATATAGGTCAATTTTATGAAGTAAGTAATCTTACCGCATTTTTTGTTTGGGGAGCCATTTCATCGGTATTCTTTTTCCATATCCTATGGGTGATGAAAAAGGTAATAAATGAAGGCAAAGAAGGTCTCTCGGCTGATGCTCAAAAGATTTTATCAAATATATGGGTACTCTTCCTAGTCTCCTGGTTCTTGTATCCTGGAGCTTATCTAATGCCATATCTAACAGGGCTAGATGGCTTCTTTTTCAGTGAAGATGGAGTGATGGCAAGGCAGTTAACCTATACTATTGCCGATGTTTGTTCCAAAGTAATATACGGTGTACTCCTTGGTAATCTTGCATTGAAACTGAGCAATAACAAAGAAATGGTTGAGCTGAGTAAC MFGDFNRVDNPILSLSYFKIQLTGIGLCRLLKPCLNFSKNIKHIKKFIKINGNKFEIDYFDMTQELGNANFENFIGATEGFSEIAYQFTSHILTLGYAVMLAGLLYFILTIKKVDKKYQMSNILSAVVMVSAFLLLYAQAENWTTSFTFDISRGKYFLEPNGDLFNNGYRYLNWLIDVPMLLFQILFVVSLTKSKFSSIRNQFWFSGAMMIITGYIGQFYEVSNLTAFFVWGAISSVFFFHILWVMKKVINEGKEGLSADAQKILSNIWVLFLVSWFLYPGAYLMPYLTGLDGFFFSEDGVMARQLTYTIADVCSKVIYGVLLGNLALKLSNNKEMVELSN ------------------------------------------------------------------------------------------------------------------ATGTTTGGCGATTTTAATCGAGTTGACAATCCAATTTTATCACTCTCGTATTTTAAAATACAATTGACAGGTATAGGCTTGTGTAGATTGCTTAAACCTTGTTTAAATTTTTCTAAAAACATTAAACATATTAAAAAATTTATTAAAATTAACGGAAACAAATTTGAAATAGATTATTTTGATATGACACAAGAATTAGGAAATGCCAATTTTGAAAACTTCATTGGAGCAACAGAAGGCTTCTCAGAAATTGCGTATCAGTTTACATCGCACATTCTTACATTAGGTTATGCGGTGATGCTCGCTGGATTGCTATATTTTATCCTGACGATTAAAAAAGTAGATAAAAAATATCAAATGTCCAATATATTATCTGCGGTGGTAATGGTTTCTGCATTTTTGCTTTTGTATGCGCAAGCCGAGAATTGGACC---ACAAGTTTTACTTTTGATATATCCAGAGGAAAGTATTTTTTAGAACCGAATGGTGATTTATTTAACAATGGATACCGTTACCTCAACTGG------------------------CTTATCGATGTACCGATGCTGCTTTTCCAGATTCTTTTCGTAGTAAGTCTT---------ACA---AAATCAAAATTTAGT---TCTATA------------------------------------CGTAATCAA---TTTTGGTTTTCTGGTGCGATGATGATTATTACAGGTTATATAGGTCAA---------TTT------------------------------------------------------------------------TATGAAGTA---AGTAAT---------CTT---------------------------ACCGCATTT------------------TTTGTTTGG---GGAGCCATTTCATCGGTATTCTTTTTCCATATCCTATGGGTGATG------------------------AAAAAGGTAATAAATGAAGGCAAAGAAGGTCTC---------------TCGGCTGATGCT---CAA---AAG---ATT---TTA---TCA---AATATA---TGGGTACTCTTCCTAGTC---------------------------------------------------------------TCCTGG---------TTCTTGTATCCTGGAGCTTATCTAATGCCATATCTAACAGGGCTAGATGGCTTCTTTTTCAGTGAAGATGGAGTGATGGCAAGGCAGTTAACCTATACTATTGCCGATGTTTGTTCCAAAGTAATATACGGTGTACTCCTTGGTAATCTTGCATTGAAACTGAGCAATAACAAAGAAATGGTTGAGCTGAGTAAC--------------------------------------------------------------------------------------------------------------- --------------------------------------MFGDFNRVDNPILSLSYFKIQLTGIGLCRLLKPCLNFSKNIKHIKKFIKINGNKFEIDYFDMTQELGNANFENFIGATEGFSEIAYQFTSHILTLGYAVMLAGLLYFILTIKKVDKKYQMSNILSAVVMVSAFLLLYAQAENWT-TSFTFDISRGKYFLEPNGDLFNNGYRYLNW--------LIDVPMLLFQILFVVSL---T-KSKFS-SI------------RNQ-FWFSGAMMIITGYIGQ---F------------------------YEV-SN---L---------TAF------FVW-GAISSVFFFHILWVM--------KKVINEGKEGL-----SADA-Q-K-I-L-S-NI-WVLFLV---------------------SW---FLYPGAYLMPYLTGLDGFFFSEDGVMARQLTYTIADVCSKVIYGVLLGNLALKLSNNKEMVELSN------------------------------------- [NQ-rhodopsin]_NC_020156 [NQ-rhodopsin] 443241923_1098224_1099063_Nonlabens_dokdonensis_DSW_6_NQ_rhodopsin_genome gi|443241923|gb|NC_020156| Nonlabens dokdonensis DSW6, complete genome Nonlabens dokdonensis DSW6, complete genome NC_020156 [[other rhodopsin/NQrhodopsin cluster]] other rhodopsin NQrhodopsin cluster NQ rhodopsin sodium pump N97 ; Q108 light-energy conversion (ion transport) Green (L105) [Bacteria/Bacteroidetes/Flavobacteriia/Flavobacteriales/Flavobacteriaceae/Nonlabens] taxon:592029 genomic_DNA strain 11-juin-13 #na #na Korean Sea marine 37.242752 131.870364 #na #na #na #na #na ATGATACAAGATTTAGGAAATTCAAATTTTGAGAATTATGTAGGTGCTACAGACGGATTCTCTGAAATGGCTTATCAAATGACATCACACGTACTCACATTGGGATATGCTGTAATGTTTGCTGGTTTGCTCTATTTTATTTTAACTATTAAAAATGTAGATAAGAAATACAGAATGTCCAATATACTTTCTGCTGTGGTGATGGTTTCTGCTGCATTGCTTTTATATGCTCAAGCAGGAAACTGGACAGAAAGTTTTGCTTTTGATGCAGAAAGAGGAAAGTACTTTCTAGTTGAAGGTGGCGATTTGTTTAATAACGGTTATCGTTATTTAAACTGGCTTATAGATGTACCGATGCTGTTATTTCAAATACTATTTGTAGTGCAACTCACTAAATCTAAATTAAGCTCTGTACGTAATCAATTTTGGTTTTCTGGAGCAATGATGATTATTACAGGTTACATAGGTCAATATTATGAGGTAACTGATTTAAGCGCATTCTTTATTTGGGGAGCAATATCGACAGTATTTTTCTTCCATATATTATGGTTAATGAACAAAGTTATTAAAGAAGGTAAAGTAGGAATCCCTAAAAAAGGTCAGAAAATATTATCTAATATCTGGATTTTATTCTTGGTCTCGTGGTTCTTGTATCCAGGAGCTTATTTAATGCCGCATCTCGGTGGAATTGAAGGATTCTTGTTTAACGAGTCAGGTGTCGTAGGAAGACAAATCACCTACACTATTGCAGACGTTTGTTCTAAAGTAATTTATGGTGTATTACTTGGTAATTTGGCACTTGTATTAAGTAAAAACAAAGAAATGATAGAAACAGCC MIQDLGNSNFENYVGATDGFSEMAYQMTSHVLTLGYAVMFAGLLYFILTIKNVDKKYRMSNILSAVVMVSAALLLYAQAGNWTESFAFDAERGKYFLVEGGDLFNNGYRYLNWLIDVPMLLFQILFVVQLTKSKLSSVRNQFWFSGAMMIITGYIGQYYEVTDLSAFFIWGAISTVFFFHILWLMNKVIKEGKVGIPKKGQKILSNIWILFLVSWFLYPGAYLMPHLGGIEGFLFNESGVVGRQITYTIADVCSKVIYGVLLGNLALVLSKNKEMIETA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGATACAAGATTTAGGAAATTCAAATTTTGAGAATTATGTAGGTGCTACAGACGGATTCTCTGAAATGGCTTATCAAATGACATCACACGTACTCACATTGGGATATGCTGTAATGTTTGCTGGTTTGCTCTATTTTATTTTAACTATTAAAAATGTAGATAAGAAATACAGAATGTCCAATATACTTTCTGCTGTGGTGATGGTTTCTGCTGCATTGCTTTTATATGCTCAAGCAGGAAACTGGACA---GAAAGTTTTGCTTTTGATGCAGAAAGAGGAAAGTACTTTCTAGTTGAAGGTGGCGATTTGTTTAATAACGGTTATCGTTATTTAAACTGG------------------------CTTATAGATGTACCGATGCTGTTATTTCAAATACTATTTGTAGTGCAACTC---------ACT---AAATCTAAATTAAGC---TCTGTA------------------------------------CGTAATCAA---TTTTGGTTTTCTGGAGCAATGATGATTATTACAGGTTACATAGGTCAA---------TAT------------------------------------------------------------------------TATGAGGTA---ACTGAT---------TTA---------------------------AGCGCATTC------------------TTTATTTGG---GGAGCAATATCGACAGTATTTTTCTTCCATATATTATGGTTAATG------------------------AACAAAGTTATTAAAGAAGGTAAAGTAGGAATC---------------CCTAAAAAAGGT---CAG---AAA---ATA---TTA---TCT---AATATC---TGGATTTTATTCTTGGTC---------------------------------------------------------------TCGTGG---------TTCTTGTATCCAGGAGCTTATTTAATGCCGCATCTCGGTGGAATTGAAGGATTCTTGTTTAACGAGTCAGGTGTCGTAGGAAGACAAATCACCTACACTATTGCAGACGTTTGTTCTAAAGTAATTTATGGTGTATTACTTGGTAATTTGGCACTTGTATTAAGTAAAAACAAAGAAATGATAGAAACAGCC------------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------------MIQDLGNSNFENYVGATDGFSEMAYQMTSHVLTLGYAVMFAGLLYFILTIKNVDKKYRMSNILSAVVMVSAALLLYAQAGNWT-ESFAFDAERGKYFLVEGGDLFNNGYRYLNW--------LIDVPMLLFQILFVVQL---T-KSKLS-SV------------RNQ-FWFSGAMMIITGYIGQ---Y------------------------YEV-TD---L---------SAF------FIW-GAISTVFFFHILWLM--------NKVIKEGKVGI-----PKKG-Q-K-I-L-S-NI-WILFLV---------------------SW---FLYPGAYLMPHLGGIEGFLFNESGVVGRQITYTIADVCSKVIYGVLLGNLALVLSKNKEMIETA-------------------------------------- [other-rhodopsin]_HQ663776 [other-rhodopsin] SCGC_AAA041G17_Betaproteobacteria_HQ663776 gi|325163151|gb|HQ663776| Beta proteobacterium SCGC AAA041G17 rhodopsin gene, partial cds Beta proteobacterium SCGC AAA041G17 rhodopsin gene, partial cds HQ663776 [[other rhodopsin]] other rhodopsin unknown unknown D97 ; E108 unknown Green (L105) [Bacteria/Proteobacteria/Betaproteobacteria] taxon:938809 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTGGATTGGCTACTCACTGTGCCATTGCTTGTAGCAGAACTCGTAGTTGTGTCTGGCGTAAGCAAGGAAGTAGCAAAGAAAGTGACACCAAGACTGGTGATCGCAGCATTGCTCATGATTGCAACCGGATACCCGGGTGAAATCGCCGATCACGGCAGCAGCACTCGCAACATCTGGTTTGTCATTTCATTCCTTTTCATGCTTTATGTGTTGTTCGAATTGTTCGCAGGCACGATTGGCAAGACACTCAAGTCGCAAGGTGGAGAAATCGGAAAGAAACTCAACAACTTGCGCTACGTGCTCGTTGCAACATGGGGCGTCTACCCAATGGTC YVDWLLTVPLLVAELVVVSGVSKEVAKKVTPRLVIAALLMIATGYPGEIADHGSSTRNIWFVISFLFMLYVLFELFAGTIGKTLKSQGGEIGKKLNNLRYVLVATWGVYPMV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTGGATTGG------------------------CTACTCACTGTGCCATTGCTTGTAGCAGAACTCGTAGTTGTGTCTGGCGTA---------AGC---AAGGAAGTAGCAAAG---AAAGTG------------------------------------ACACCAAGA---CTGGTGATCGCAGCATTGCTCATGATTGCAACCGGATACCCGGGTGAA---------ATC------------------------------------------------------------------------------GCCGATCACGGC---------AGC---------------------------AGCACTCGC------------------AACATCTGG---TTTGTCATTTCATTCCTTTTCATGCTTTATGTGTTGTTCGAATTG---------------TTC------GCAGGCACGATTGGCAAGACACTCAAGTCGCAA---------------GGTGGAGAAATC---GGA---AAG---AAA---CTC---AAC---AACTTG---CGCTACGTGCTCGTTGCA---------------------------------------------------------------ACATGG---------GGCGTCTACCCAATGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLVAELVVVSGV---S-KEVAK-KV------------TPR-LVIAALLMIATGYPGE---I--------------------------ADHG---S---------STR------NIW-FVISFLFMLYVLFEL-----F--AGTIGKTLKSQ-----GGEI-G-K-K-L-N-NL-RYVLVA---------------------TW---GVYPMV------------------------------------------------------------------------------------------------ [other-rhodopsin]_HQ663736 [other-rhodopsin] SCGC_AAA024J18_Alphaproteobacteria_HQ663736 gi|325163072|gb|HQ663736| Alpha proteobacterium SCGC AAA024J18 rhodopsin gene, partial cds Alpha proteobacterium SCGC AAA024J18 rhodopsin gene, partial cds HQ663736 [[other rhodopsin]] other rhodopsin unknown unknown na ; E108 unknown Green (L105) [Bacteria/Proteobacteria/Alphaproteobacteria] taxon:938622 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Sparkling other freshwater 46.0095 -89.7006 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TGGTTGCTGACCGTGCCATTGCTTCTCATCGAACTTATCCTCGTGATGCGTTTGAGCCAAGACGAAACCGTATCGAAGTCGTTCAAGCTCGGCGGAGCAGCAGCGCTCATGATCGTCTTGGGCTACCCAGGTGAAATCGCAACTGACATTCCGACCCGCGTCTTGTGGGGCACATTGTCGGCAATTCCTTTTGTCTACATCATGTGGCAATTGTTTGCTGGTCTGGGTGCTTCGATCGAAAAACAACCAGAAAATGTACGCGAACTGGTGAAGAAGGCACGCTTGTTGACCTTCGCATCATGGGGTGTCTACCCGATG WLLTVPLLLIELILVMRLSQDETVSKSFKLGGAAALMIVLGYPGEIATDIPTRVLWGTLSAIPFVYIMWQLFAGLGASIEKQPENVRELVKKARLLTFASWGVYPM ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------------------------TTGCTGACCGTGCCATTGCTTCTCATCGAACTTATCCTCGTGATGCGTTTG---------AGC---CAAGACGAAACCGTA---TCGAAG------------------------------------TCGTTCAAG---CTCGGCGGAGCAGCAGCGCTCATGATCGTCTTGGGCTACCCAGGTGAA---------ATC------------------------------------------------------------------------------GCA---ACTGAC---------ATT---------------------------CCGACCCGC------------------GTCTTGTGG---GGCACATTGTCGGCAATTCCTTTTGTCTACATCATGTGGCAATTG---------------TTT------GCT---GGTCTGGGTGCTTCGATCGAAAAACAA---------------CCAGAAAATGTA---CGC---GAA---CTG---GTG---AAG---AAGGCA---CGCTTGTTGACCTTCGCA---------------------------------------------------------------TCATGG---------GGTGTCTACCCGATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------LLTVPLLLIELILVMRL---S-QDETV-SK------------SFK-LGGAAALMIVLGYPGE---I--------------------------A-TD---I---------PTR------VLW-GTLSAIPFVYIMWQL-----F--A-GLGASIEKQ-----PENV-R-E-L-V-K-KA-RLLTFA---------------------SW---GVYPM------------------------------------------------------------------------------------------------- [other-rhodopsin]_1105095563142 [other-rhodopsin] JCVI_ORF_1105095563142_GS012_Estuary_14m jcvi|1105095563142| 1105095563142 JCVI ORF 1105095563142 1105095563142 [[other rhodopsin/mixed cluster]] other rhodopsin mixed cluster xanthorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 18-DEC-2003 Estuary/14m_depth/S_3.5_psu/GS012/Chesapeake_Bay/MD/North_American_East_Coast Atlantic Ocean marine 38.946945 -76.41722 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATCTCTATGGAAGTAGGTGGATTTAATTTAGTTTACAACTCGTTGTCATTTGCCATTGCAACATTTGGTGCGGCAACAGTTTTCTTTTTTGCACAGCGTTCTCAAGTCGCTCCTGCATATAAAACAGCGCTATCCTTATCCGGGTTAGTTTGTTTAATCGCTTTTTATCATTATTTAAGAATGTTTGAAAGTTTCAATGATGCATACACATTAGTTAATGGTTCTGTTGAAGCAACTGGTGCTCAATTTAATGATGCATACCGTTATGTGGATTGGTTATTAACTGTACCATTGTTACTTCTTGAGCTTGTTTTAGTAATGAGACTATCTAAAGAAGAAACATATTCTAAAGGTACAAAACTTGCATTAGCTGCAGCAGTGATGGTTATTCTAGGCTATCCAGGTGAAATCATTACTGATTCATCAATGTATGGTGACCGTTGGATGTGGTGGGTTCTTTCAATGATTCCATTTATATATATTGTAAGGGATCTTGTTAGTGGCCTTGGTGCATCTATCAGTAAACAGCCTAAAGCCGTTCAAGGCCTTGTAAGTAAAGCAAGAACTTTAACGATTCTTTCATGGTGTTTCTACCCAATCGTGTTTATTTTACCAATGATCGGATTTCAAGCTGATCCAGGTGCAGTAAACCCAGTTATTCAAGTTGGATATACTATAGCTGACGTGGTAGCAAAAGCCTTGTTTGGTGTAATGATTTATATGATCGCTCAGCGTAAGTCTGATGCGGGTGCA ISMEVGGFNLVYNSLSFAIATFGAATVFFFAQRSQVAPAYKTALSLSGLVCLIAFYHYLRMFESFNDAYTLVNGSVEATGAQFNDAYRYVDWLLTVPLLLLELVLVMRLSKEETYSKGTKLALAAAVMVILGYPGEIITDSSMYGDRWMWWVLSMIPFIYIVRDLVSGLGASISKQPKAVQGLVSKARTLTILSWCFYPIVFILPMIGFQADPGAVNPVIQVGYTIADVVAKALFGVMIYMIAQRKSDAGA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTCTATGGAAGTAGGTGGATTTAATTTAGTTTACAACTCGTTGTCATTTGCCATTGCAACATTTGGTGCGGCAACAGTTTTCTTTTTTGCACAGCGTTCTCAAGTCGCTCCTGCATATAAAACAGCGCTATCCTTATCCGGGTTAGTTTGTTTAATCGCTTTTTATCATTATTTAAGAATGTTTGAAAGTTTCAATGATGCATACACA---------------TTAGTTAATGGTTCTGTTGAAGCAACTGGTGCTCAATTTAATGATGCATACCGTTATGTGGATTGG------------------------TTATTAACTGTACCATTGTTACTTCTTGAGCTTGTTTTAGTAATGAGACTA---------TCT---AAAGAAGAAACATAT---TCTAAA------------------------------------GGTACAAAA---CTTGCATTAGCTGCAGCAGTGATGGTTATTCTAGGCTATCCAGGTGAA---------ATC------------------------------------------------------------------------------ATT---ACTGATTCATCAATGTAT---------------------------GGTGACCGT------------------TGGATGTGG---TGGGTTCTTTCAATGATTCCATTTATATATATTGTAAGGGATCTT---------------GTT------AGT---GGCCTTGGTGCATCTATCAGTAAACAG---------------CCTAAAGCCGTT---CAA---GGC---CTT---GTA---AGT---AAAGCA---AGAACTTTAACGATTCTT---------------------------------------------------------------TCATGG---------TGTTTCTACCCAATCGTGTTTATTTTACCAATGATCGGATTTCAAGCT---------GATCCAGGTGCAGTAAACCCAGTTATTCAAGTTGGATATACTATAGCTGACGTGGTAGCAAAAGCCTTGTTTGGTGTAATGATTTATATGATCGCTCAGCGTAAGTCTGATGCGGGTGCA--------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------ISMEVGGFNLVYNSLSFAIATFGAATVFFFAQRSQVAPAYKTALSLSGLVCLIAFYHYLRMFESFNDAYT-----LVNGSVEATGAQFNDAYRYVDW--------LLTVPLLLLELVLVMRL---S-KEETY-SK------------GTK-LALAAAVMVILGYPGE---I--------------------------I-TDSSMY---------GDR------WMW-WVLSMIPFIYIVRDL-----V--S-GLGASISKQ-----PKAV-Q-G-L-V-S-KA-RTLTIL---------------------SW---CFYPIVFILPMIGFQA---DPGAVNPVIQVGYTIADVVAKALFGVMIYMIAQRKSDAGA------------------------------------------- [other-rhodopsin]_1105137681968 [other-rhodopsin] JCVI_ORF_1105137681968 jcvi|1105137681968| 1105137681968 JCVI ORF 1105137681968 1105137681968 [[other rhodopsin/mixed cluster]] other rhodopsin mixed cluster xanthorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] #na genomic_DNA_from_fraction_0.1_0.8 other #na 19-DEC-2003 Coastal/3m_depth/S_n.a/GS013/Off_Nags_Head/NC/North_American_East_Coast Atlantic Ocean marine 36.003887 -75.39472 #na #na #na #na metagenomic data extracted from Camera in March 2013 by D.Boeuf ATCCTATCAGGATTAGTTTGTTTAATCGCTTTTTATCATTATTTAAGAATGTTTGAAAGTTTCAATGATGCATACACATTAGTTAATGGTTCTGTTGAAGCAACTGGTGCTCAATTTAATGATGCATACCGTTATGTGGATTGGTTATTAACTGTACCATTGTTACTTCTAGAGCTTGTTTTAGTAATGAGACTATCTAAAGAAGAAACATATTCTAAAGGTACAAAACTTGCATTAGCTGCAGCAGTGATGGTTATTCTAGGCTATCCAGGTGAAATCATTACTGATTCATCAATGTATGGTGACCGTTGGATGTGGTGGGTTCTTTCAATGATTCCATTTATATATATTGTAAGGGATCTTGTTAGTGGCCTTGGTGCATCTATCAGTAAACAGCCTAAAGCCGTTCAAGGCCTTGTAAGTAAAGCAAGAACTTTAACGATTCTTTCATGGTGTTTCTACCCAATCGTGTTTATTTTACCAATGATCGGATTTCAAGCTGATCCAGGTGCAGTAAACCCAGTTATTCAAGTTGGATATACTATAGCTGACGTGGTAGCAAAAGCCTTGTTTGGTGTAATGATTTATATGATCGCTCAGCGTAAGTCTGATGCGGGTGCA ILSGLVCLIAFYHYLRMFESFNDAYTLVNGSVEATGAQFNDAYRYVDWLLTVPLLLLELVLVMRLSKEETYSKGTKLALAAAVMVILGYPGEIITDSSMYGDRWMWWVLSMIPFIYIVRDLVSGLGASISKQPKAVQGLVSKARTLTILSWCFYPIVFILPMIGFQADPGAVNPVIQVGYTIADVVAKALFGVMIYMIAQRKSDAGA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCTATCAGGATTAGTTTGTTTAATCGCTTTTTATCATTATTTAAGAATGTTTGAAAGTTTCAATGATGCATACACA---------------TTAGTTAATGGTTCTGTTGAAGCAACTGGTGCTCAATTTAATGATGCATACCGTTATGTGGATTGG------------------------TTATTAACTGTACCATTGTTACTTCTAGAGCTTGTTTTAGTAATGAGACTA---------TCT---AAAGAAGAAACATAT---TCTAAA------------------------------------GGTACAAAA---CTTGCATTAGCTGCAGCAGTGATGGTTATTCTAGGCTATCCAGGTGAA---------ATC------------------------------------------------------------------------------ATT---ACTGATTCATCAATGTAT---------------------------GGTGACCGT------------------TGGATGTGG---TGGGTTCTTTCAATGATTCCATTTATATATATTGTAAGGGATCTT---------------GTT------AGT---GGCCTTGGTGCATCTATCAGTAAACAG---------------CCTAAAGCCGTT---CAA---GGC---CTT---GTA---AGT---AAAGCA---AGAACTTTAACGATTCTT---------------------------------------------------------------TCATGG---------TGTTTCTACCCAATCGTGTTTATTTTACCAATGATCGGATTTCAAGCT---------GATCCAGGTGCAGTAAACCCAGTTATTCAAGTTGGATATACTATAGCTGACGTGGTAGCAAAAGCCTTGTTTGGTGTAATGATTTATATGATCGCTCAGCGTAAGTCTGATGCGGGTGCA--------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------ILSGLVCLIAFYHYLRMFESFNDAYT-----LVNGSVEATGAQFNDAYRYVDW--------LLTVPLLLLELVLVMRL---S-KEETY-SK------------GTK-LALAAAVMVILGYPGE---I--------------------------I-TDSSMY---------GDR------WMW-WVLSMIPFIYIVRDL-----V--S-GLGASISKQ-----PKAV-Q-G-L-V-S-KA-RTLTIL---------------------SW---CFYPIVFILPMIGFQA---DPGAVNPVIQVGYTIADVVAKALFGVMIYMIAQRKSDAGA------------------------------------------- [other-rhodopsin]_NZ_DS995299 [other-rhodopsin] 254467776_1246295_1247044_beta_proteobacterium_KB13_scf_1106380163076_Xanthorhodopsin_WGS gi|254467776|gb|NZ_DS995299| beta proteobacterium KB13 scf 1106380163076 genomic scaffold, whole genome shotgun sequence beta proteobacterium KB13 scf 1106380163076 genomic scaffold, whole genome shotgun sequence NZ_DS995299 [[other rhodopsin/mixed cluster]] other rhodopsin mixed cluster xanthorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Betaproteobacteria] taxon:314607 genomic_DNA strain 11-May-2013 #na #na Pacific Ocean marine 44.651667 -124.176667 #na #na #na #na #na ATGGAAGTAGGCGGATATAATTTAGTCTATAACTCACTGTCATTCGCAATTGCAACATTTGGTGCGGCTACAGTATTCTTTTTTGCTCAGCGTTCTCAAGTCGCTCCAGCATATAAAACTGCGCTATCCCTATCAGGGCTAGTTTGTTTAATCGCTTTTTATCATTATCTAAGAATGTTTGAAAGTTTCAATGACGCATATACATTAGTTAATGGTACTGTTGAAGCAACAGGTGCTCAATTCAATGACGCATATCGTTATGTGGATTGGTTGCTAACTGTGCCTCTGTTACTTCTTGAGTTAGTCTTAGTAATGAGACTCTCAAAAGAGGAAACATATTCCAAAGGTACAAAATTAGCTTTAGCTGCTGCAGTTATGGTTATCTTAGGTTACCCAGGTGAAGTAATTACTGATCCATCTATGTACGGTGATCGTTGGATGTGGTGGGTACTAGCTATGATTCCATTTGTATACATTGTATGGGATCTGGTTAGTGGTCTTGGCGCATCAATCAGCAAACAGCCAAAAGCAGTTCAAGGTCTTGTAAGTAAAGCAAGAACTTTAACTATTTTGTCATGGTGCTTCTATCCAATCGTTTTCGTTTTCCCAATGATTGGTTTACAAGCAGACCCAGGTGCTGTTAATCCTGCTATTCAAGTAGGTTATACAGTTGCTGACGTGGTTGCAAAAGCACTGTTTGGTGTAATGATTTATATGATTGCTCAGCGTAAGTCTGATGCAGGTGCA MEVGGYNLVYNSLSFAIATFGAATVFFFAQRSQVAPAYKTALSLSGLVCLIAFYHYLRMFESFNDAYTLVNGTVEATGAQFNDAYRYVDWLLTVPLLLLELVLVMRLSKEETYSKGTKLALAAAVMVILGYPGEVITDPSMYGDRWMWWVLAMIPFVYIVWDLVSGLGASISKQPKAVQGLVSKARTLTILSWCFYPIVFVFPMIGLQADPGAVNPAIQVGYTVADVVAKALFGVMIYMIAQRKSDAGA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGAAGTAGGCGGATATAATTTAGTCTATAACTCACTGTCATTCGCAATTGCAACATTTGGTGCGGCTACAGTATTCTTTTTTGCTCAGCGTTCTCAAGTCGCTCCAGCATATAAAACTGCGCTATCCCTATCAGGGCTAGTTTGTTTAATCGCTTTTTATCATTATCTAAGAATGTTTGAAAGTTTCAATGACGCATATACA---------------TTAGTTAATGGTACTGTTGAAGCAACAGGTGCTCAATTCAATGACGCATATCGTTATGTGGATTGG------------------------TTGCTAACTGTGCCTCTGTTACTTCTTGAGTTAGTCTTAGTAATGAGACTC---------TCA---AAAGAGGAAACATAT---TCCAAA------------------------------------GGTACAAAA---TTAGCTTTAGCTGCTGCAGTTATGGTTATCTTAGGTTACCCAGGTGAA---------GTA------------------------------------------------------------------------------ATT---ACTGATCCATCTATGTAC---------------------------GGTGATCGT------------------TGGATGTGG---TGGGTACTAGCTATGATTCCATTTGTATACATTGTATGGGATCTG---------------GTT------AGT---GGTCTTGGCGCATCAATCAGCAAACAG---------------CCAAAAGCAGTT---CAA---GGT---CTT---GTA---AGT---AAAGCA---AGAACTTTAACTATTTTG---------------------------------------------------------------TCATGG---------TGCTTCTATCCAATCGTTTTCGTTTTCCCAATGATTGGTTTACAAGCA---------GACCCAGGTGCTGTTAATCCTGCTATTCAAGTAGGTTATACAGTTGCTGACGTGGTTGCAAAAGCACTGTTTGGTGTAATGATTTATATGATTGCTCAGCGTAAGTCTGATGCAGGTGCA--------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------MEVGGYNLVYNSLSFAIATFGAATVFFFAQRSQVAPAYKTALSLSGLVCLIAFYHYLRMFESFNDAYT-----LVNGTVEATGAQFNDAYRYVDW--------LLTVPLLLLELVLVMRL---S-KEETY-SK------------GTK-LALAAAVMVILGYPGE---V--------------------------I-TDPSMY---------GDR------WMW-WVLAMIPFVYIVWDL-----V--S-GLGASISKQ-----PKAV-Q-G-L-V-S-KA-RTLTIL---------------------SW---CFYPIVFVFPMIGLQA---DPGAVNPAIQVGYTVADVVAKALFGVMIYMIAQRKSDAGA------------------------------------------- [other-rhodopsin]_AAUX01000001 [other-rhodopsin] Methylophilales_HTCC2181_1100893002543_genome_COG0477_Permeases_AAUX01000001 gi|118439782|gb|AAUX01000001| Methylophilales bacterium HTCC2181 1100893002543, whole genome shotgun sequence Methylophilales bacterium HTCC2181 1100893002543, whole genome shotgun sequence AAUX01000001 [[other rhodopsin/mixed cluster]] other rhodopsin mixed cluster xanthorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Betaproteobacteria/Methylophilales/unclassified Methylophilales] taxon:383631 genomic_DNA strain 28-nov-06 #na #na Pacific Ocean marine 44.65167 -124.064441 Direct Submission Giovannoni,S., Vergin,K., Ferriera,S., Johnson,J., Kravitz,S., Beeson,K., Sutton,G., Rogers,Y.H., Friedman,R., Frazier,M. and Venter,J.C. Submitted (28NOV2006) J Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA #na #na ATGGAACTAGCAGATTATAATCTAGTATTTAATTCGCTTTCCTTTGCCATTGCAACATTTGGCGCAGGAACAGTATTCTTTTTCGCTCAGCGCTCTCAAGTCGCTCCAGCGTACAAAACAGCATTAACTTTGTCAGGCTTAGTTTGCTTAATCGCTTTTTACCATTATTTAAGAATGTTTGATAGCTTCAATCATGCATACGTTTTAAGTAATGGAGTAGTTGAGACTACAGGCGCAGCCTTTAATGACGCATATCGCTATGTTGACTGGTTATTGACCGTTCCACTATTATTGCTTGAACTTGTTCTTGTGATGAGGTTGAGTAAAGAGGAAACTTATTCAAAAGGAACAAAGCTTGCATTTGCTGCAGCCCTAATGGTAGCCCTAGGTTATCCTGGTGAAATATCAGGTGACGTAGGAACACGATGGATGTGGTGGATTCTAGCAATGATTCCGTTCTTATATATTGTTAAAGATTTAGTTTCTGGTCTTGGAGCTTCAATTTCTAAGCAACCAAAAGCTGTGCAAGGCCTAGTAAGCAATGCAAGAACGTTAACAATATTGTCTTGGACATTTTATCCAATAGTGTTTATTCTTCCGATGCTTGGTATCGGTGGACTTGTTGCAGGTGAAGTTAATGCTGCAGTTCAAGTAGGATACACAATAGCGGATATAGTAGCCAAAGCCATGTTCGGTGTTATGATTTATATGATTGCACAACGTAAATCAGATGCTGGCGCT MELADYNLVFNSLSFAIATFGAGTVFFFAQRSQVAPAYKTALTLSGLVCLIAFYHYLRMFDSFNHAYVLSNGVVETTGAAFNDAYRYVDWLLTVPLLLLELVLVMRLSKEETYSKGTKLAFAAALMVALGYPGEISGDVGTRWMWWILAMIPFLYIVKDLVSGLGASISKQPKAVQGLVSNARTLTILSWTFYPIVFILPMLGIGGLVAGEVNAAVQVGYTIADIVAKAMFGVMIYMIAQRKSDAGA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGAACTAGCAGATTATAATCTAGTATTTAATTCGCTTTCCTTTGCCATTGCAACATTTGGCGCAGGAACAGTATTCTTTTTCGCTCAGCGCTCTCAAGTCGCTCCAGCGTACAAAACAGCATTAACTTTGTCAGGCTTAGTTTGCTTAATCGCTTTTTACCATTATTTAAGAATGTTTGATAGCTTCAATCATGCATACGTT---------------TTAAGTAATGGAGTAGTTGAGACTACAGGCGCAGCCTTTAATGACGCATATCGCTATGTTGACTGG------------------------TTATTGACCGTTCCACTATTATTGCTTGAACTTGTTCTTGTGATGAGGTTG---------AGT---AAAGAGGAAACTTAT---TCAAAA------------------------------------GGAACAAAG---CTTGCATTTGCTGCAGCCCTAATGGTAGCCCTAGGTTATCCTGGTGAA---------ATA------------------------------------------------------------------------------TCA---GGTGAC---------GTA---------------------------GGAACACGA------------------TGGATGTGG---TGGATTCTAGCAATGATTCCGTTCTTATATATTGTTAAAGATTTA---------------GTT------TCT---GGTCTTGGAGCTTCAATTTCTAAGCAA---------------CCAAAAGCTGTG---CAA---GGC---CTA---GTA---AGC---AATGCA---AGAACGTTAACAATATTG---------------------------------------------------------------TCTTGG---------ACATTTTATCCAATAGTGTTTATTCTTCCGATGCTTGGTATCGGTGGA---CTT---GTTGCAGGTGAAGTTAATGCTGCAGTTCAAGTAGGATACACAATAGCGGATATAGTAGCCAAAGCCATGTTCGGTGTTATGATTTATATGATTGCACAACGTAAATCAGATGCTGGCGCT--------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------MELADYNLVFNSLSFAIATFGAGTVFFFAQRSQVAPAYKTALTLSGLVCLIAFYHYLRMFDSFNHAYV-----LSNGVVETTGAAFNDAYRYVDW--------LLTVPLLLLELVLVMRL---S-KEETY-SK------------GTK-LAFAAALMVALGYPGE---I--------------------------S-GD---V---------GTR------WMW-WILAMIPFLYIVKDL-----V--S-GLGASISKQ-----PKAV-Q-G-L-V-S-NA-RTLTIL---------------------SW---TFYPIVFILPMLGIGG-L-VAGEVNAAVQVGYTIADIVAKAMFGVMIYMIAQRKSDAGA------------------------------------------- [other-rhodopsin]_EF089400 [other-rhodopsin] EB0_41B09_genomic_PR1_EF089400 gi|119713680|gb|EF089400| Uncultured marine bacterium EB0 41B09 genomic sequence Uncultured marine bacterium EB0 41B09 genomic sequence EF089400 [[other rhodopsin/mixed cluster]] other rhodopsin mixed cluster xanthorhodopsin proton pump G97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:415438 genomic_DNA other 16-nov-07 #na #na Pacific Ocean marine 36.8 -122 #na #na #na #na #na ATGCAAGTAGCTGACTACAATTTACTTTATAACTCTTTATCTTTCGCAATTGCCACATTTGGTGCAAGTACCGTATTCTTTTTTTGCCAGAGATCACAAGTTGCACCTGCTTATAAGACCTCACTGACTCTTGCTGGCTTAGTTTGCTTAATCGCCCTCTATCACTATTTTAGAATATTCGAGAGCTTCAACGATGCCTATATATTTCAAGATGGCCTAGTGAAAGAAACTGGTGGGCAATTGAATGTTAGCTATCGATATGTTGGTTGGCTTTTAACCGTCCCATTACTATTGCTTGAGCTCGTCTTAGTGATCAGACTTACAAGAGAAGAAACATTTTCTGTGGGGACAAAATTAACTGTTGCCGCAATTATTATGGTGCTCTTGGGTTACTCTGGAGAGGTTTTAGTCGATACCAATCAAATACAAGAAAGATGGATATATTGGTCACTGGCCATGCTGCCTTTTTTGTACATTCTTTATTACCTGATCATAAAATTAAAAAATCCCATATCAAAACAACCGAAAAATGTTCGAAGCCTAGTCAGTAATGCAAGGTGGCTGCTTATACTATCTTGGGCAATTTACCCTGTTGTATATTTACTTCCAATATTTGATACTAGCACCTCCTACATAAACCTTCAGATTGGCTATACAGTAGCAGATATACTTTCACTCGCTTTATTTGGCGTTATGATTTATTTAATCGCTCAAAGAAAGTCGGATATTGGAGCC MQVADYNLLYNSLSFAIATFGASTVFFFCQRSQVAPAYKTSLTLAGLVCLIALYHYFRIFESFNDAYIFQDGLVKETGGQLNVSYRYVGWLLTVPLLLLELVLVIRLTREETFSVGTKLTVAAIIMVLLGYSGEVLVDTNQIQERWIYWSLAMLPFLYILYYLIIKLKNPISKQPKNVRSLVSNARWLLILSWAIYPVVYLLPIFDTSTSYINLQIGYTVADILSLALFGVMIYLIAQRKSDIGA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCAAGTAGCTGACTACAATTTACTTTATAACTCTTTATCTTTCGCAATTGCCACATTTGGTGCAAGTACCGTATTCTTTTTTTGCCAGAGATCACAAGTTGCACCTGCTTATAAGACCTCACTGACTCTTGCTGGCTTAGTTTGCTTAATCGCCCTCTATCACTATTTTAGAATATTCGAGAGCTTCAACGATGCCTATATA---------------TTTCAAGATGGCCTAGTGAAAGAAACTGGTGGGCAATTGAATGTTAGCTATCGATATGTTGGTTGG------------------------CTTTTAACCGTCCCATTACTATTGCTTGAGCTCGTCTTAGTGATCAGACTT---------ACA---AGAGAAGAAACATTT---TCTGTG------------------------------------GGGACAAAA---TTAACTGTTGCCGCAATTATTATGGTGCTCTTGGGTTACTCTGGAGAG---------GTT------------------------------------------------------------------------------TTA---GTCGATACCAATCAAATA---------------------------CAAGAAAGA------------------TGGATATAT---TGGTCACTGGCCATGCTGCCTTTTTTGTACATTCTTTATTACCTG---------------ATC------ATA---AAATTAAAAAATCCCATATCAAAACAA---------------CCGAAAAATGTT---CGA---AGC---CTA---GTC---AGT---AATGCA---AGGTGGCTGCTTATACTA---------------------------------------------------------------TCTTGG---------GCAATTTACCCTGTTGTATATTTACTTCCAATATTT---------------------GATACTAGCACCTCCTACATAAACCTTCAGATTGGCTATACAGTAGCAGATATACTTTCACTCGCTTTATTTGGCGTTATGATTTATTTAATCGCTCAAAGAAAGTCGGATATTGGAGCC--------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------MQVADYNLLYNSLSFAIATFGASTVFFFCQRSQVAPAYKTSLTLAGLVCLIALYHYFRIFESFNDAYI-----FQDGLVKETGGQLNVSYRYVGW--------LLTVPLLLLELVLVIRL---T-REETF-SV------------GTK-LTVAAIIMVLLGYSGE---V--------------------------L-VDTNQI---------QER------WIY-WSLAMLPFLYILYYL-----I--I-KLKNPISKQ-----PKNV-R-S-L-V-S-NA-RWLLIL---------------------SW---AIYPVVYLLPIF-------DTSTSYINLQIGYTVADILSLALFGVMIYLIAQRKSDIGA------------------------------------------- [other-rhodopsin]_NZ_AEPR01000192 [other-rhodopsin] 329904640_3019_3792_Oxalobacteraceae_bacterium_IMCC9480_ctg_330_proteorhodopsin_WGS gi|329904640|gb|NZ_AEPR01000192| Oxalobacteraceae bacterium IMCC9480 ctg 330, whole genome shotgun sequence Oxalobacteraceae bacterium IMCC9480 ctg 330, whole genome shotgun sequence NZ_AEPR01000192 [[other rhodopsin/mixed cluster]] other rhodopsin mixed cluster xanthorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Betaproteobacteria/Burkholderiales/Oxalobacteraceae] taxon:937450 genomic_DNA strain 11-May-2013 #na #na Greenland Sea marine 79.001944 11.309167 #na #na #na #na #na ATGATCATCGGAGAATCGTTCATGGAAGCAGTCACACTTGGTCAGTACGAATTGGTCTACAACGCCTTTTCATTTGCAATCGCAGTCATGGGAGCGGCAACGATATTTTTCTTTCTGGGCCGTTCGCAAGTCGCTTCGGCTTATCGCACCGCTCTTACCATCACCGGCCTGGTCACCTTGATCGCGGCTTACCATTACCTGCGGATTTTCAATTCGTGGGAAGCCGCTTTCGTGATTACCGGCGATCAGATCAAGGCCTCCGGTATCAAGTTCAATGATGCCTATCGCTACGTTGACTGGCTGCTCACCGTGCCACTGTTGCTGATCGAACTGATCCTCGTGATGCGCTTGCCACGTGCCGAAACCATCGCCAAAAGCACCAAGCTCGGCTTGCTGGCTGCGTTGATGGTCGTGCTTGGCTACCCGGGCGAAATCTCGGCAGACGGCGGTACCCGCTGGATGTGGTGGGGCCTGGCCATGATCCCGTTCCTGATCATTGTCTATGACCTGTTTGTCGGCCTGAAAAAATCCATCGATTCACAGCCGGCCGCAGCACGCGGTCTGATCAGCACCGCACGTTGGGTCACGGTCATTTCATGGTGTTTCTATCCGGTCGTGTTCGTCTTCCCGATGATCGGCTTCACCGGTAGCAGCGCTGCCACCGCCGTTCAAGTGGGTTACACCGTCTCCGACATCGTCGCCAAGGCCATGTTCGGCGTCCTGATCTACATGATCGCAGTACGCAAATCCGAAGCAGAAGGCCAGCACGCC MIIGESFMEAVTLGQYELVYNAFSFAIAVMGAATIFFFLGRSQVASAYRTALTITGLVTLIAAYHYLRIFNSWEAAFVITGDQIKASGIKFNDAYRYVDWLLTVPLLLIELILVMRLPRAETIAKSTKLGLLAALMVVLGYPGEISADGGTRWMWWGLAMIPFLIIVYDLFVGLKKSIDSQPAAARGLISTARWVTVISWCFYPVVFVFPMIGFTGSSAATAVQVGYTVSDIVAKAMFGVLIYMIAVRKSEAEGQHA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGATCATCGGAGAATCGTTCATGGAAGCAGTCACACTTGGTCAGTACGAATTGGTCTACAACGCCTTTTCATTTGCAATCGCAGTCATGGGAGCGGCAACGATATTTTTCTTTCTGGGCCGTTCGCAAGTCGCTTCGGCTTATCGCACCGCTCTTACCATCACCGGCCTGGTCACCTTGATCGCGGCTTACCATTACCTGCGGATTTTCAATTCGTGGGAAGCCGCTTTCGTG---------------ATTACCGGCGATCAGATCAAGGCCTCCGGTATCAAGTTCAATGATGCCTATCGCTACGTTGACTGG------------------------CTGCTCACCGTGCCACTGTTGCTGATCGAACTGATCCTCGTGATGCGCTTG---------CCA---CGTGCCGAAACCATC---GCCAAA------------------------------------AGCACCAAG---CTCGGCTTGCTGGCTGCGTTGATGGTCGTGCTTGGCTACCCGGGCGAA---------ATC------------------------------------------------------------------------------TCG---GCAGAC---------GGC---------------------------GGTACCCGC------------------TGGATGTGG---TGGGGCCTGGCCATGATCCCGTTCCTGATCATTGTCTATGACCTG---------------TTT------GTC---GGCCTGAAAAAATCCATCGATTCACAG---------------CCGGCCGCAGCA---CGC---GGT---CTG---ATC---AGC---ACCGCA---CGTTGGGTCACGGTCATT---------------------------------------------------------------TCATGG---------TGTTTCTATCCGGTCGTGTTCGTCTTCCCGATGATCGGCTTCACCGGT---------------AGCAGCGCTGCCACCGCCGTTCAAGTGGGTTACACCGTCTCCGACATCGTCGCCAAGGCCATGTTCGGCGTCCTGATCTACATGATCGCAGTACGCAAATCCGAAGCAGAAGGCCAGCACGCC------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------MIIGESFMEAVTLGQYELVYNAFSFAIAVMGAATIFFFLGRSQVASAYRTALTITGLVTLIAAYHYLRIFNSWEAAFV-----ITGDQIKASGIKFNDAYRYVDW--------LLTVPLLLIELILVMRL---P-RAETI-AK------------STK-LGLLAALMVVLGYPGE---I--------------------------S-AD---G---------GTR------WMW-WGLAMIPFLIIVYDL-----F--V-GLKKSIDSQ-----PAAA-R-G-L-I-S-TA-RWVTVI---------------------SW---CFYPVVFVFPMIGFTG-----SSAATAVQVGYTVSDIVAKAMFGVLIYMIAVRKSEAEGQHA---------------------------------------- [other-rhodopsin]_NZ_AHHB01000042 [other-rhodopsin] 395653007_298499_299287_Janthinobacterium_lividum_PAMC_25724_ctg7180000005907_WGS gi|395653007|gb|NZ_AHHB01000042| Janthinobacterium lividum PAMC 25724 ctg7180000005907, whole genome shotgun sequence Janthinobacterium lividum PAMC 25724 ctg7180000005907, whole genome shotgun sequence NZ_AHHB01000042 [[other rhodopsin/mixed cluster]] other rhodopsin mixed cluster xanthorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Betaproteobacteria/Burkholderiales/Oxalobacteraceae/Janthinobacterium] taxon:1112211 genomic_DNA strain 12-May-2013 #na #na other freshwater 47.28 11.41 #na #na #na #na #na GTGGATCTAATCACAGTAGGACAATTCGAACTGGTATATAACGCGTTTTCATTCGCCATTGCCGTCATGGGAGCGGCAACGATCTTCTTTTTCCTCGGACGTTCACAGGTGGCGGCGCCCTACAAGACGGCCCTCACCATCACCGGTTTGGTGACACTGATCGCCGCCTACCACTACATCCGTATTTTCGCCTCGTGGGAAGAGTCGTACACCGTGGTGGCAGGACAGGTAACGGCGACGGGCATCAAATTTAACGATGCCTATCGTTACGTCGACTGGTTGCTGACGGTGCCGCTGCTGCTGATCGAACTGATCCTGGTAATGCGTTTATCGCCAGCGGAAACCGTGGCAAAAAGCACCAAGCTGGGCTTGCTGGCCGCACTGATGGTTGTGCTCGGTTACCCCGGTGAAATTTCCGGTGTTCCTGGCACGCGCTGGCTCTGGTGGACGCTGGCCATGATCCCGTTCCTGATCATTGTCTATGACCTGTTCTTCGGCCTGAAAAAATCGATCGCATCGCAGCCGGAATCGGCACGCGGCCTGGTCAGTGCCGCACGCTGGGTGACCGTGTTGTCGTGGTGCTTTTATCCGGTCGTCTTCATTTTCCCGATGATAGGCTTTACTGGCGGCGCTGCCACCACCGCCGTTCAGGTGGGATACACGGTCGCTGATATCGTAGCCAAAGCGGCATTCGGCGTACTGATCTACATGATCGCGGTCCGCAAGTCGGCCGCCGACGAGCATGCCGTCGCCCCCGCCTCTGGACACAAGCAAGGCGGCAACGCG VDLITVGQFELVYNAFSFAIAVMGAATIFFFLGRSQVAAPYKTALTITGLVTLIAAYHYIRIFASWEESYTVVAGQVTATGIKFNDAYRYVDWLLTVPLLLIELILVMRLSPAETVAKSTKLGLLAALMVVLGYPGEISGVPGTRWLWWTLAMIPFLIIVYDLFFGLKKSIASQPESARGLVSAARWVTVLSWCFYPVVFIFPMIGFTGGAATTAVQVGYTVADIVAKAAFGVLIYMIAVRKSAADEHAVAPASGHKQGGNA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGGATCTAATCACAGTAGGACAATTCGAACTGGTATATAACGCGTTTTCATTCGCCATTGCCGTCATGGGAGCGGCAACGATCTTCTTTTTCCTCGGACGTTCACAGGTGGCGGCGCCCTACAAGACGGCCCTCACCATCACCGGTTTGGTGACACTGATCGCCGCCTACCACTACATCCGTATTTTCGCCTCGTGGGAAGAGTCGTACACC---------------GTGGTGGCAGGACAGGTAACGGCGACGGGCATCAAATTTAACGATGCCTATCGTTACGTCGACTGG------------------------TTGCTGACGGTGCCGCTGCTGCTGATCGAACTGATCCTGGTAATGCGTTTA---------TCG---CCAGCGGAAACCGTG---GCAAAA------------------------------------AGCACCAAG---CTGGGCTTGCTGGCCGCACTGATGGTTGTGCTCGGTTACCCCGGTGAA---------ATT------------------------------------------------------------------------------TCC---GGTGTT---------CCT---------------------------GGCACGCGC------------------TGGCTCTGG---TGGACGCTGGCCATGATCCCGTTCCTGATCATTGTCTATGACCTG---------------TTC------TTC---GGCCTGAAAAAATCGATCGCATCGCAG---------------CCGGAATCGGCA---CGC---GGC---CTG---GTC---AGT---GCCGCA---CGCTGGGTGACCGTGTTG---------------------------------------------------------------TCGTGG---------TGCTTTTATCCGGTCGTCTTCATTTTCCCGATGATAGGCTTTACTGGC---------------GGCGCTGCCACCACCGCCGTTCAGGTGGGATACACGGTCGCTGATATCGTAGCCAAAGCGGCATTCGGCGTACTGATCTACATGATCGCGGTCCGCAAGTCGGCCGCCGACGAGCATGCCGTCGCCCCCGCCTCTGGACACAAGCAAGGCGGCAACGCG------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------VDLITVGQFELVYNAFSFAIAVMGAATIFFFLGRSQVAAPYKTALTITGLVTLIAAYHYIRIFASWEESYT-----VVAGQVTATGIKFNDAYRYVDW--------LLTVPLLLIELILVMRL---S-PAETV-AK------------STK-LGLLAALMVVLGYPGE---I--------------------------S-GV---P---------GTR------WLW-WTLAMIPFLIIVYDL-----F--F-GLKKSIASQ-----PESA-R-G-L-V-S-AA-RWVTVL---------------------SW---CFYPVVFIFPMIGFTG-----GAATTAVQVGYTVADIVAKAAFGVLIYMIAVRKSAADEHAVAPASGHKQGGNA---------------------------- [other-rhodopsin]_NZ_ABHC01000011 [other-rhodopsin] 163795271_131391_132158_Alphaproteobacterium_BAL199_1103548001533_Xanthorhodopsin_WGS gi|163795271|gb|NZ_ABHC01000011| Alpha proteobacterium BAL199 1103548001533, whole genome shotgun sequence Alpha proteobacterium BAL199 1103548001533, whole genome shotgun sequence NZ_ABHC01000011 [[other rhodopsin]] other rhodopsin xanthorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Alphaproteobacteria] taxon:331869 genomic_DNA strain 09-May-2013 #na #na Baltic Sea marine 58.58778 18.24667 #na #na #na #na #na ATGCAGGCCATTACAGCAAGCCAGTACTATTTGGTCTATAATTCACTTTCCTTCACTATCGCAACTTTTGCGGCCGCAACACTGTTCTTCTGGTTCGGCCGCAGCCAATGCAGCGCGAACTACCGTACCGCAGTGACGATCACCGGACTTGTGACCTTCATTGCACTCTATCACTACTGGCGTATGTTCGAGAGCTGGGATGCAGCTTTCAATGTTGTCAACGGCACCATTGAAGCGACCGGGATCGCCTACAACAGAGCTTATCGCTATGTTGACTGGCTTCTCACAGTTCCGCTTTTGCTCATTGAACTCATCCTTGTGATGCGTCTGAGCCAAGCCGAAACCATGTCACGCTCCATCAAGCTCGGCGGTGCCGCAGCATTGATGATCGTGCTGGGCTATCCTGGTGAAGTCTCAGAAGGCATGGAATCAACACGCCTCATCTGGGGCGCGCTGTCGATGATCCCCTTCCTCTACATCGTGATGACGTTGTACTCGGGGCTTTCCAAATCCATCGACCAACAGCCGGAGAACGTGCGTGGACTTGTCAGCATGGCACGCTCGCTGGTTGTCGTGTCGTGGTTCTTCTATCCGATTGTTTACTTCCTGCCGTTCGTCATTCCGATGGACGGTGGCGCGGCCTTCGCCTTGATCGAAGTCGGTTACACGATTGCGGACATCACCGCGAAAGCCGTGTTCGGCCTGTTGATCTACATGATCGCCGTGCGTAAGTCCGAAAATGAATCGGACTCGCCTGCAAAGGCA MQAITASQYYLVYNSLSFTIATFAAATLFFWFGRSQCSANYRTAVTITGLVTFIALYHYWRMFESWDAAFNVVNGTIEATGIAYNRAYRYVDWLLTVPLLLIELILVMRLSQAETMSRSIKLGGAAALMIVLGYPGEVSEGMESTRLIWGALSMIPFLYIVMTLYSGLSKSIDQQPENVRGLVSMARSLVVVSWFFYPIVYFLPFVIPMDGGAAFALIEVGYTIADITAKAVFGLLIYMIAVRKSENESDSPAKA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCAGGCCATTACAGCAAGCCAGTACTATTTGGTCTATAATTCACTTTCCTTCACTATCGCAACTTTTGCGGCCGCAACACTGTTCTTCTGGTTCGGCCGCAGCCAATGCAGCGCGAACTACCGTACCGCAGTGACGATCACCGGACTTGTGACCTTCATTGCACTCTATCACTACTGGCGTATGTTCGAGAGCTGGGATGCAGCTTTCAAT---------------GTTGTCAACGGCACCATTGAAGCGACCGGGATCGCCTACAACAGAGCTTATCGCTATGTTGACTGG------------------------CTTCTCACAGTTCCGCTTTTGCTCATTGAACTCATCCTTGTGATGCGTCTG---------AGC---CAAGCCGAAACCATG---TCACGC------------------------------------TCCATCAAG---CTCGGCGGTGCCGCAGCATTGATGATCGTGCTGGGCTATCCTGGTGAA---------GTC------------------------------------------------------------------------------TCA---GAAGGC------ATGGAA---------------------------TCAACACGC------------------CTCATCTGG---GGCGCGCTGTCGATGATCCCCTTCCTCTACATCGTGATGACGTTG---------------TAC------TCG---GGGCTTTCCAAATCCATCGACCAACAG---------------CCGGAGAACGTG---CGT---GGA---CTT---GTC---AGC---ATGGCA---CGCTCGCTGGTTGTCGTG---------------------------------------------------------------TCGTGG---------TTCTTCTATCCGATTGTTTACTTCCTGCCGTTCGTCATT------------CCGATGGACGGTGGCGCGGCCTTCGCCTTGATCGAAGTCGGTTACACGATTGCGGACATCACCGCGAAAGCCGTGTTCGGCCTGTTGATCTACATGATCGCCGTGCGTAAGTCCGAAAATGAATCGGACTCGCCTGCAAAGGCA--------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------MQAITASQYYLVYNSLSFTIATFAAATLFFWFGRSQCSANYRTAVTITGLVTFIALYHYWRMFESWDAAFN-----VVNGTIEATGIAYNRAYRYVDW--------LLTVPLLLIELILVMRL---S-QAETM-SR------------SIK-LGGAAALMIVLGYPGE---V--------------------------S-EG--ME---------STR------LIW-GALSMIPFLYIVMTL-----Y--S-GLSKSIDQQ-----PENV-R-G-L-V-S-MA-RSLVVV---------------------SW---FFYPIVYFLPFVI----PMDGGAAFALIEVGYTIADITAKAVFGLLIYMIAVRKSENESDSPAKA------------------------------------- [Octadecabacter-rhodopsin]_CP003740 [Octadecabacter-rhodopsin] 254436487_2641162_2641977_Octadecabacter_antarcticus_307_scf_1104686006564_bacteriorhodopsin_subfamily_WGS gi|476507773|gb|CP003740| Octadecabacter antarcticus 307, complete genome Octadecabacter antarcticus 307, complete genome CP003740 [[other rhodopsin/Octadecabacter cluster]] other rhodopsin Octadecabacter cluster xanthorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Alphaproteobacteria/Rhodobacterales/Rhodobacteraceae/Octadecabacter] taxon:391626 genomic_DNA strain 31-janv-14 #na #na Antarctic Ocean marine -77.88 166.58 #na #na #na #na #na ATGGAAACTTTATCACTGGGTCAGTATGATCTAATTTTTAACGCATTTTCGTTCGGCTTTGCGACGCTCGCGGCTGCAACGCTATTCTTCTGGCTGGGTATCGGCCAGGTCAAGCAAGAGTACAAACTGGCACTTATTGTGACCGGGCTTGTAACGTTTATCGCAGCCTACCATTATTTCCGCATAGGACAAAGCTGGGTTGACGCATACACGCTCGTTGACGGGGTGCACGTGCCAACCGAAAAAGTCTTTAACTCTGCGTATCGATACGTTGATTGGCTTTTGACTGTACCGCTCCTTCTGGTTGAGCTGATCTTGGTAATGAGCCTCAGCAGGTCTGAGACAGTATCGCGTGCGACCAGCCTTGGTCTTGCGGCACTACTGATGGTTGCTTTGGGATATCCAGGCGAAGTCTCTGACTCACTCGGCGTTCGCTGGGTCTTTGGTCAGCTGTCGATGGTTCCATTCTTGTGGATTATCTACCAACTCTACAAAGGCTTGGGTGACGCAATTGAAAGCCAGCCAGAAAGTGCACGTGGTCTCGTACGTCTTGCGCGCAACGTAACTGTTGGCAGCTGGTGTTTCTACCCGGTTGTCTATTTTGCAGGTGCAATTGGACTCGAAGGTGCGACTGCGACAGTAATCGTCGAAGTCGGTTATACCATCGCTGACATCATTGCGAAGGCTGGCTTTGGTGTCATCATCTTCCTGATTGCTTTGCGCAAAAGCGAAGATCCGCAGAACGACAAAACCTTGACCGTTCCCGCAGGCGAAGGCCCAAAGGACAAAAACACCAAGACGGTCCCCGCCGAG METLSLGQYDLIFNAFSFGFATLAAATLFFWLGIGQVKQEYKLALIVTGLVTFIAAYHYFRIGQSWVDAYTLVDGVHVPTEKVFNSAYRYVDWLLTVPLLLVELILVMSLSRSETVSRATSLGLAALLMVALGYPGEVSDSLGVRWVFGQLSMVPFLWIIYQLYKGLGDAIESQPESARGLVRLARNVTVGSWCFYPVVYFAGAIGLEGATATVIVEVGYTIADIIAKAGFGVIIFLIALRKSEDPQNDKTLTVPAGEGPKDKNTKTVPAE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGAAACTTTATCACTGGGTCAGTATGATCTAATTTTTAACGCATTTTCGTTCGGCTTTGCGACGCTCGCGGCTGCAACGCTATTCTTCTGGCTGGGTATCGGCCAGGTCAAGCAAGAGTACAAACTGGCACTTATTGTGACCGGGCTTGTAACGTTTATCGCAGCCTACCATTATTTCCGCATAGGACAAAGCTGGGTTGACGCATACACG---------------CTCGTTGACGGGGTGCACGTGCCAACCGAAAAAGTCTTTAACTCTGCGTATCGATACGTTGATTGG------------------------CTTTTGACTGTACCGCTCCTTCTGGTTGAGCTGATCTTGGTAATGAGCCTC---------AGC---AGGTCTGAGACAGTA---TCGCGT------------------------------------GCGACCAGC---CTTGGTCTTGCGGCACTACTGATGGTTGCTTTGGGATATCCAGGCGAA---------GTC------------------------------------------------------------------------------TCT---GACTCA---------CTC---------------------------GGCGTTCGC------------------TGGGTCTTT---GGTCAGCTGTCGATGGTTCCATTCTTGTGGATTATCTACCAACTC---------------TAC------AAA---GGCTTGGGTGACGCAATTGAAAGCCAG---------------CCAGAAAGTGCA---CGT---GGT---CTC---GTA---CGT---CTTGCG---CGCAACGTAACTGTTGGC---------------------------------------------------------------AGCTGG---------TGTTTCTACCCGGTTGTCTATTTTGCAGGTGCAATTGGACTCGAAGGT---------------GCGACTGCGACAGTAATCGTCGAAGTCGGTTATACCATCGCTGACATCATTGCGAAGGCTGGCTTTGGTGTCATCATCTTCCTGATTGCTTTGCGCAAAAGCGAAGATCCGCAGAACGACAAAACCTTGACCGTTCCCGCAGGCGAAGGCCCAAAGGACAAAAACACCAAGACGGTCCCCGCCGAG--------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------METLSLGQYDLIFNAFSFGFATLAAATLFFWLGIGQVKQEYKLALIVTGLVTFIAAYHYFRIGQSWVDAYT-----LVDGVHVPTEKVFNSAYRYVDW--------LLTVPLLLVELILVMSL---S-RSETV-SR------------ATS-LGLAALLMVALGYPGE---V--------------------------S-DS---L---------GVR------WVF-GQLSMVPFLWIIYQL-----Y--K-GLGDAIESQ-----PESA-R-G-L-V-R-LA-RNVTVG---------------------SW---CFYPVVYFAGAIGLEG-----ATATVIVEVGYTIADIIAKAGFGVIIFLIALRKSEDPQNDKTLTVPAGEGPKDKNTKTVPAE------------------- [Octadecabacter-rhodopsin]_CP003742 [Octadecabacter-rhodopsin] 254449407_2305946_2306719_Octadecabacter_arcticus_238_scf_1106129327943_Xanthorhodopsin_WGS gi|476512267|gb|CP003742| Octadecabacter arcticus 238, complete genome Octadecabacter arcticus 238, complete genome CP003742 [[other rhodopsin/Octadecabacter cluster]] other rhodopsin Octadecabacter cluster xanthorhodopsin proton pump D97 ; E108 light-energy conversion (ion transport) Green (L105) [Bacteria/Proteobacteria/Alphaproteobacteria/Rhodobacterales/Rhodobacteraceae/Octadecabacter] taxon:391616 genomic_DNA strain 31-janv-14 #na #na Arctic Ocean marine 73.016667 -148.516667 #na #na #na #na #na ATGGAAACATTATCATTGGGTCAATATGATCTTATTTTTAACGCCTTTTCGTTTGGCTTTGCTACGCTTGCCGCAGCAACACTTTTCTTTTGGCTTGGCATTGGTCAGGTGAAATCAGAATATAAAACTGCTTTAGTAATAACAGGCTTGGTAACATTCATCGCAGCCTACCATTATTTCCGCATAGGACAAAGCTGGGTTGACGCATACACGCTCGTTGACGGGGTGCACGTGCCAACCGAAAAAGCCTTTAATTCGGCATATCGTTACGTCGATTGGCTTTTGACTGTGCCGCTTCTGTTGATCGAACTGATCCTCGTGATGAGCCTCAGCAGATCCGAGACAGTCTCGCGCGCGACCAGTCTTGGTCTTGCGGCGCTGTTAATGGTTGCCTTGGGATATCCGGGCGAAGTGTCAGACTCGGGCGGCGTCCGTTGGATCTTTGGTCTTTTGTCTATGATCCCATTCCTTTGGATCGTTTTCCAACTCTACGTTGGTCTGGGCAAAGCAATCGAAAGCCAGCCGGAAAATGCACGTGGTCTCGTCAGAACGGCACGTAACGTAACCGTTGGCAGCTGGTGTTTTTACCCAGTTGTCTACTTTGCCGGCGCAGTTGGCCTTGAAGGTCCCTTCGCCACGGTTGTTGTTGAAGTAGGTTACACCATTGCCGACATCATCGCAAAAGCTGGCTTCGGTGTACTTATCTACATGATTGCCATGCGCAAAAGTGAAGACACCAACGATTCCATAAAGACAGCAGTCCCTGCTGAA METLSLGQYDLIFNAFSFGFATLAAATLFFWLGIGQVKSEYKTALVITGLVTFIAAYHYFRIGQSWVDAYTLVDGVHVPTEKAFNSAYRYVDWLLTVPLLLIELILVMSLSRSETVSRATSLGLAALLMVALGYPGEVSDSGGVRWIFGLLSMIPFLWIVFQLYVGLGKAIESQPENARGLVRTARNVTVGSWCFYPVVYFAGAVGLEGPFATVVVEVGYTIADIIAKAGFGVLIYMIAMRKSEDTNDSIKTAVPAE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGAAACATTATCATTGGGTCAATATGATCTTATTTTTAACGCCTTTTCGTTTGGCTTTGCTACGCTTGCCGCAGCAACACTTTTCTTTTGGCTTGGCATTGGTCAGGTGAAATCAGAATATAAAACTGCTTTAGTAATAACAGGCTTGGTAACATTCATCGCAGCCTACCATTATTTCCGCATAGGACAAAGCTGGGTTGACGCATACACG---------------CTCGTTGACGGGGTGCACGTGCCAACCGAAAAAGCCTTTAATTCGGCATATCGTTACGTCGATTGG------------------------CTTTTGACTGTGCCGCTTCTGTTGATCGAACTGATCCTCGTGATGAGCCTC---------AGC---AGATCCGAGACAGTC---TCGCGC------------------------------------GCGACCAGT---CTTGGTCTTGCGGCGCTGTTAATGGTTGCCTTGGGATATCCGGGCGAA---------GTG------------------------------------------------------------------------------TCA---GACTCG---------GGC---------------------------GGCGTCCGT------------------TGGATCTTT---GGTCTTTTGTCTATGATCCCATTCCTTTGGATCGTTTTCCAACTC---------------TAC------GTT---GGTCTGGGCAAAGCAATCGAAAGCCAG---------------CCGGAAAATGCA---CGT---GGT---CTC---GTC---AGA---ACGGCA---CGTAACGTAACCGTTGGC---------------------------------------------------------------AGCTGG---------TGTTTTTACCCAGTTGTCTACTTTGCCGGCGCAGTTGGCCTTGAAGGT---------------CCCTTCGCCACGGTTGTTGTTGAAGTAGGTTACACCATTGCCGACATCATCGCAAAAGCTGGCTTCGGTGTACTTATCTACATGATTGCCATGCGCAAAAGTGAAGACACCAACGATTCCATAAAGACAGCAGTCCCTGCTGAA--------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------METLSLGQYDLIFNAFSFGFATLAAATLFFWLGIGQVKSEYKTALVITGLVTFIAAYHYFRIGQSWVDAYT-----LVDGVHVPTEKAFNSAYRYVDW--------LLTVPLLLIELILVMSL---S-RSETV-SR------------ATS-LGLAALLMVALGYPGE---V--------------------------S-DS---G---------GVR------WIF-GLLSMIPFLWIVFQL-----Y--V-GLGKAIESQ-----PENA-R-G-L-V-R-TA-RNVTVG---------------------SW---CFYPVVYFAGAVGLEG-----PFATVVVEVGYTIADIIAKAGFGVLIYMIAMRKSEDTNDSIKTAVPAE--------------------------------- [other-rhodopsin]_HQ654768 [other-rhodopsin] Oxyrrhis_marina_OM5001_HQ654768 gi|324096621|gb|HQ654768| Oxyrrhis marina clone OM5001 rhodopsin type II mRNA, partial cds. Oxyrrhis marina clone OM5001 rhodopsin type II mRNA, partial cds. HQ654768 [[other rhodopsin]] other rhodopsin eukaryote rhodopsin type II unknown D97 ; E108 unknown Green (L105) [Eukaryota/Alveolata/Dinophyceae/Oxyrrhinales/Oxyrrhinaceae/Oxyrrhis] taxon:2969 mRNA strain 02-mars-11 #na #na #na #na #na A bacterial proteorhodopsin proton pump in marine eukaryotes Slamovits,C.H., Okamoto,N., Burri,L., James,E.R. and Keeling,P.J. Nat Commun 2, 183 (2011) 21304512 #na GCGGTTTTGTCTTTCGCACAATCCTCCATGGCTCCTCTCGCGGGTGATTTTTCCTATGGAGAGTGGAACGCAGTGTACAATGCCTTGTCATTCGGCATTGCCGCGATGGGCTCCGCGACGGTATTTTTCTGGTTGCAGTTGCCTAACGTAACAAGGAGCTATAGGACCGCCCTGACGATCACCGGGATCGTGACTTGGATCGCTACGTACCACTACTTCCGAATCTTCAACTCGTGGGTTGAGGCTTTCGAGGTGCAGGAGTACCACGGCGCGTACTTGGTGAAGGTGTCGGGAACACCGTTCAACGACGCCTACAGGTACGTTGATTGGCTGCTGACCGTGCCGTTGCTGCTGATTGAATTGATTTTGGTGATGAAGTTGCCCTCCGGTGAGACTGCTGCCATGGGCACCAAGTTGGGCCTGGCCAGCGCGGTGATGGTGGCTTTGGGGTACCCGGGAGAGATCCAGGACAACTTGGCTGTTCGATGGGGCTGGTGGGCCTTGGCCATGATCCCGTTCTTCTACGTGGTGTACTCGCTGCTCTCCGGGTTGGGTGAGGCCACCGCCCGGCAGCCGGAGAGCGTCGGTGGGCTGGTGTCTGCTGCTCGCTACCTCACCGCGGTCAGCTGGTTGACTTATCCCTTCGTGTATATCATTAAGAACGTCGGA AVLSFAQSSMAPLAGDFSYGEWNAVYNALSFGIAAMGSATVFFWLQLPNVTRSYRTALTITGIVTWIATYHYFRIFNSWVEAFEVQEYHGAYLVKVSGTPFNDAYRYVDWLLTVPLLLIELILVMKLPSGETAAMGTKLGLASAVMVALGYPGEIQDNLAVRWGWWALAMIPFFYVVYSLLSGLGEATARQPESVGGLVSAARYLTAVSWLTYPFVYIIKNVG ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGGTTTTGTCTTTCGCACAATCCTCCATGGCTCCTCTCGCGGGTGATTTTTCCTATGGAGAGTGGAACGCAGTGTACAATGCCTTGTCATTCGGCATTGCCGCGATGGGCTCCGCGACGGTATTTTTCTGGTTGCAGTTGCCTAACGTAACAAGGAGCTATAGGACCGCCCTGACGATCACCGGGATCGTGACTTGGATCGCTACGTACCACTACTTCCGAATCTTCAACTCGTGGGTTGAGGCTTTCGAGGTGCAGGAGTAC---CACGGCGCGTACTTGGTGAAGGTGTCGGGAACACCGTTCAACGACGCCTACAGGTACGTTGATTGG------------------------CTGCTGACCGTGCCGTTGCTGCTGATTGAATTGATTTTGGTGATGAAGTTG---------CCC---TCCGGTGAGACTGCT---GCCATG------------------------------------GGCACCAAG---TTGGGCCTGGCCAGCGCGGTGATGGTGGCTTTGGGGTACCCGGGAGAG---------ATC------------------------------------------------------------------------------CAG---GACAAC---------TTG---------------------------GCTGTTCGA------------------TGGGGCTGG---TGGGCCTTGGCCATGATCCCGTTCTTCTACGTGGTGTACTCGCTG---------------CTC------TCC---GGGTTGGGTGAGGCCACCGCCCGGCAG---------------CCGGAGAGCGTC---GGT---GGG---CTG---GTG---TCT---GCTGCT---CGCTACCTCACCGCGGTC---------------------------------------------------------------AGCTGG---------TTGACTTATCCCTTCGTGTATATCATTAAGAACGTCGGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------AVLSFAQSSMAPLAGDFSYGEWNAVYNALSFGIAAMGSATVFFWLQLPNVTRSYRTALTITGIVTWIATYHYFRIFNSWVEAFEVQEY-HGAYLVKVSGTPFNDAYRYVDW--------LLTVPLLLIELILVMKL---P-SGETA-AM------------GTK-LGLASAVMVALGYPGE---I--------------------------Q-DN---L---------AVR------WGW-WALAMIPFFYVVYSL-----L--S-GLGEATARQ-----PESV-G-G-L-V-S-AA-RYLTAV---------------------SW---LTYPFVYIIKNVG----------------------------------------------------------------------------------------- [Delta-rhodopsin]_HQ663815 [Delta-rhodopsin] SCGC_AAA278C16_Deltaproteobacteria_HQ663815 gi|325163227|gb|HQ663815| Delta proteobacterium SCGC AAA278C16 rhodopsin gene, partial cds Delta proteobacterium SCGC AAA278C16 rhodopsin gene, partial cds HQ663815 [[other rhodopsin/deltaproteobacterial-like]] other rhodopsin deltaproteobacterial-like unknown unknown D97 ; E108 unknown Green (L105) [Bacteria/Proteobacteria/Deltaproteobacteria] taxon:938867 genomic_DNA other 27-DEC-2011 #na epilimnion_of_freshwater_Lake_Damariscotta other freshwater 44.1773 -69.4868 Highthroughput singlecell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton MartinezGarcia,M., Swan,B.K., Poulton,N.J., Gomez,M.L., Masland,D., Sieracki,M.E. and Stepanauskas,R. ISME J 6 (1), 113123 (2012) 21716306 single cell isolate (0.51 m depth) TATGTAGATTGGCTCTTAACAGTTCCTCTGCTTCTGACTGAATTAGTACTCGTCATGAAACTAAAAAAAGAGTCCGGCAGCGTTCTTGGAAAGCTAATCCTTGCAGCTATCGCCATGATCGCACTTGGATATCCGGGCGAAATTTCAAATCCTGCTACAGAAGCTGGAGCAAGATTGATGTGGGCTGTGCTCAGCACAATCCCGTTCATCTATATTCTCTATGTACTGTGGGTGAGATTAGGATCTGCCATCGGTGAGCATCCAGCTAAGGTACAAGTACTTCTGAAAAACACTCGGTACTTGATCCTCCTTACTTGGGGCGTCTAC YVDWLLTVPLLLTELVLVMKLKKESGSVLGKLILAAIAMIALGYPGEISNPATEAGARLMWAVLSTIPFIYILYVLWVRLGSAIGEHPAKVQVLLKNTRYLILLTWGVY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTAGATTGG------------------------CTCTTAACAGTTCCTCTGCTTCTGACTGAATTAGTACTCGTCATGAAACTA---------AAA------AAAGAGTCCGGC---AGCGTT------------------------------------CTTGGAAAG---CTAATCCTTGCAGCTATCGCCATGATCGCACTTGGATATCCGGGCGAA---------ATT------------------------------------------------------------------------------TCA---AATCCTGCTACAGAAGCT---------------------------GGAGCAAGA------------------TTGATGTGG---GCTGTGCTCAGCACAATCCCGTTCATCTATATTCTCTATGTACTG---------------TGG------GTG---AGATTAGGATCTGCCATCGGTGAGCAT---------------CCAGCTAAGGTA---CAA---GTA---CTT---CTG---AAA---AACACT---CGGTACTTGATCCTCCTT---------------------------------------------------------------ACTTGG---------GGCGTCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVDW--------LLTVPLLLTELVLVMKL---K--KESG-SV------------LGK-LILAAIAMIALGYPGE---I--------------------------S-NPATEA---------GAR------LMW-AVLSTIPFIYILYVL-----W--V-RLGSAIGEH-----PAKV-Q-V-L-L-K-NT-RYLILL---------------------TW---GVY--------------------------------------------------------------------------------------------------- [Delta-rhodopsin]_FJ545146 [Delta-rhodopsin] clone_Superior_LG_B2_rhodopsin_gene_partial_cds_FJ545146 gi|224383967|gb|FJ545146| Uncultured microorganism clone Superior.LG.B2 putative rhodopsin gene, partial cds. Uncultured microorganism clone Superior.LG.B2 putative rhodopsin gene, partial cds. FJ545146 [[other rhodopsin/deltaproteobacterial-like]] other rhodopsin deltaproteobacterial-like unknown unknown na ; E108 unknown Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 20-MAY-2009 01-juin-05 Lake Superior other freshwater 47.3 -91.67 Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria Sharma,A.K., Sommerfeld,K., Bullerjahn,G.S., Matteson,A.R., Wilhelm,S.W., Jezbera,J., Brandt,U., Doolittle,W.F. and Hahn,M.W. ISME J 3 (6), 726-737 (2009) 19242530 #na TTGCTGACGGTTCCACTGCTCCTAGCTGAGTTGGTAATCGTGTTGAAATTGGCGAAGAGCACTACTCGGAGCCTGATCACAAAATTGACTATTGCAGCAGTTGCAATGATTCTGCTTGGCTACCCGGGCGAACTATCTGCAGCGGACTCAAGCACCCGAACGATCTTTGGCATTCTGTCTACTCTGCCATTCCTCTACATCTTGTATGTCCTGTTTGTAGAACTCGGCAAGTCGCTTGACCGCCAGACGGAACAGGTTCGCAAGATCGTTAGTGGACTGCGGTACTCGATTCTCATCATC LLTVPLLLAELVIVLKLAKSTTRSLITKLTIAAVAMILLGYPGELSAADSSTRTIFGILSTLPFLYILYVLFVELGKSLDRQTEQVRKIVSGLRYSILII ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTGACGGTTCCACTGCTCCTAGCTGAGTTGGTAATCGTGTTGAAATTG---------GCG---AAGAGCACTACTCGG---AGCCTG------------------------------------ATCACAAAA---TTGACTATTGCAGCAGTTGCAATGATTCTGCTTGGCTACCCGGGCGAA---------CTA------------------------------------------------------------------------------TCTGCAGCGGAC---------TCA---------------------------AGCACCCGA------------------ACGATCTTT---GGCATTCTGTCTACTCTGCCATTCCTCTACATCTTGTATGTCCTG---------------TTT------GTA---GAACTCGGCAAGTCGCTTGACCGCCAG---------------ACGGAACAGGTT---CGC---AAG---ATC---GTT---AGT---GGACTG---CGGTACTCGATTCTCATC---------------------------------------------------------------ATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLLAELVIVLKL---A-KSTTR-SL------------ITK-LTIAAVAMILLGYPGE---L--------------------------SAAD---S---------STR------TIF-GILSTLPFLYILYVL-----F--V-ELGKSLDRQ-----TEQV-R-K-I-V-S-GL-RYSILI---------------------I---------------------------------------------------------------------------------------------------------- [bacteriorhodopsin]_HM475110 [bacteriorhodopsin] clone_bR-a03_HM475110 gi|299772621|gb|HM475110| Uncultured bacterium clone bR-a03 bacteriorhodopsin (bop) gene, partial cds. Uncultured bacterium clone bR-a03 bacteriorhodopsin (bop) gene, partial cds. HM475110 [[other rhodopsin/bacteriorhodopsin-like 2]] other rhodopsin bacteriorhodopsin-like 2 bacteriorhodopsin proton pump D97 ; D108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 03-juil-10 #na saltern soil other terrestrial 23.1 120.1 One partial bacteriorhodopsin sequence of genomic DNA from saltern soil Lin,S.-J., Liao,H.-C. and Chu,W.-S. Unpublished #na #na GACTGGTTGTTCACCACGCCGCTGCTGTTGATCGACCTGGCACTGCTCGCCGGGGCCGACCGCAACACCATCGCGGCGCTCGTCGGCCTAGACGTCGGGATGATCATCACGGGTCTGGTGGCTGCGCTGACCACCGCGAGCCAGGCGATGCGGATCGCCTGGTGGGGCATCAGCTGTGGCTTCTTCCTGGTCCTGCTGTACATCCTCGTCAGCAGACTCACCGCGCAGGCATCGGAGATGCCCGGTGACGTTGGCAACCTGTTCGGGACGCTCAGGAACGTGGTGATCCTGCTGTGGCTGGCCTATCCCGTCGTGTGGATCGTCGGGACCGAAGGCCTCGGCCTCGTCCCGCTGTACTACGAGACGGCCGCGTTCATGGTGCTCGACGT DWLFTTPLLLIDLALLAGADRNTIAALVGLDVGMIITGLVAALTTASQAMRIAWWGISCGFFLVLLYILVSRLTAQASEMPGDVGNLFGTLRNVVILLWLAYPVVWIVGTEGLGLVPLYYETAAFMVLD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTGG------------------------TTGTTCACCACGCCGCTGCTGTTGATCGACCTGGCACTGCTC------------------------GCCGGGGCCGACCGC---AACACC------------------------------------ATCGCGGCG---CTCGTCGGCCTAGACGTCGGGATGATCATCACGGGTCTGGTGGCTGCG---------CTG------------------------------------------------------------------------------ACC---ACCGCG---------AGC---------------CAG---------GCGATGCGG------------------ATCGCCTGG---TGGGGCATCAGCTGTGGCTTCTTCCTGGTCCTGCTGTACATCCTC---------------GTC------AGC---AGACTCACCGCGCAGGCATCGGAGATG---------------CCCGGTGACGTT---GGC---AAC---CTG---TTC---GGG---ACGCTC---AGGAACGTGGTGATCCTG---------------------------------------------------------------CTGTGG---------CTGGCCTATCCCGTCGTGTGGATCGTCGGGACCGAAGGC---CTCGGC---------------CTCGTCCCGCTGTACTACGAGACGGCCGCGTTCATGGTGCTCGAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DW--------LFTTPLLLIDLALL--------AGADR-NT------------IAA-LVGLDVGMIITGLVAA---L--------------------------T-TA---S-----Q---AMR------IAW-WGISCGFFLVLLYIL-----V--S-RLTAQASEM-----PGDV-G-N-L-F-G-TL-RNVVIL---------------------LW---LAYPVVWIVGTEG-LG-----LVPLYYETAAFMVLD------------------------------------------------------------------ [bacteriorhodopsin]_HM475127 [bacteriorhodopsin] clone_bR-g07_HM475127 gi|299772655|gb|HM475127| Uncultured bacterium clone bR-g07 bacteriorhodopsin (bop) gene, partial cds. Uncultured bacterium clone bR-g07 bacteriorhodopsin (bop) gene, partial cds. HM475127 [[other rhodopsin/bacteriorhodopsin-like 2]] other rhodopsin bacteriorhodopsin-like 2 bacteriorhodopsin proton pump D97 ; D108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 03-juil-10 #na saltern soil other terrestrial 23.1 120.1 One partial bacteriorhodopsin sequence of genomic DNA from saltern soil Lin,S.-J., Liao,H.-C. and Chu,W.-S. Unpublished #na #na GACTGGCTGTTCACGACGCCGCTGCTGTTGATCGACCTGGCACTGCTCGCCGGGGCCGACCGCAACACCATCGCGACGCTCGTCGGCCTAGACGTCGGGATGATCATCACGGGTCTGGTGGCTGCGCTGACCACCGCGAGCCAGGCGATGCGGATCGCCTGGTGGGGCATCAGCTGTGGCTTCTTCCTGGTCCTGCTGTACATCCTCGTCAGCAGACTCACCGCGCAGGCATCGGAGATGCCCGGTGACGTTGGCAACCTGTTCGGGACGCTCAGGAACGTGGTTATCCTGCTGTGGCTGGCCTATCCCGTCGTGTGGATCGTCGGGACCGAAGGCCTCGGCCTCGTCCCGCTGTACTACGAGACGGCCGCGTTCATGGTGCTCGACCT DWLFTTPLLLIDLALLAGADRNTIATLVGLDVGMIITGLVAALTTASQAMRIAWWGISCGFFLVLLYILVSRLTAQASEMPGDVGNLFGTLRNVVILLWLAYPVVWIVGTEGLGLVPLYYETAAFMVLD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTGG------------------------CTGTTCACGACGCCGCTGCTGTTGATCGACCTGGCACTGCTC------------------------GCCGGGGCCGACCGC---AACACC------------------------------------ATCGCGACG---CTCGTCGGCCTAGACGTCGGGATGATCATCACGGGTCTGGTGGCTGCG---------CTG------------------------------------------------------------------------------ACC---ACCGCG---------AGC---------------CAG---------GCGATGCGG------------------ATCGCCTGG---TGGGGCATCAGCTGTGGCTTCTTCCTGGTCCTGCTGTACATCCTC---------------GTC------AGC---AGACTCACCGCGCAGGCATCGGAGATG---------------CCCGGTGACGTT---GGC---AAC---CTG---TTC---GGG---ACGCTC---AGGAACGTGGTTATCCTG---------------------------------------------------------------CTGTGG---------CTGGCCTATCCCGTCGTGTGGATCGTCGGGACCGAAGGC---CTCGGC---------------CTCGTCCCGCTGTACTACGAGACGGCCGCGTTCATGGTGCTCGAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DW--------LFTTPLLLIDLALL--------AGADR-NT------------IAT-LVGLDVGMIITGLVAA---L--------------------------T-TA---S-----Q---AMR------IAW-WGISCGFFLVLLYIL-----V--S-RLTAQASEM-----PGDV-G-N-L-F-G-TL-RNVVIL---------------------LW---LAYPVVWIVGTEG-LG-----LVPLYYETAAFMVLD------------------------------------------------------------------ [bacteriorhodopsin]_HM475121 [bacteriorhodopsin] clone_bR-f01_HM475121 gi|299772643|gb|HM475121| Uncultured bacterium clone bR-f01 bacteriorhodopsin (bop) gene, partial cds. Uncultured bacterium clone bR-f01 bacteriorhodopsin (bop) gene, partial cds. HM475121 [[other rhodopsin/bacteriorhodopsin-like 2]] other rhodopsin bacteriorhodopsin-like 2 bacteriorhodopsin proton pump D97 ; D108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 03-juil-10 #na saltern soil other terrestrial 23.1 120.1 One partial bacteriorhodopsin sequence of genomic DNA from saltern soil Lin,S.-J., Liao,H.-C. and Chu,W.-S. Unpublished #na #na GACTGGTTGTTCACGACACCGCTGCTGTTGATCGACCTGGCACTGCTAGCCGGGGCCGACCGCAACACAATCGCGACGCTCGTTGGACTGGACGTCGGGATGATTATCACTGGTCTCGTTGCCGCGCTGACCACCGCGAGTGAGACGATGCGGATCGCCTGGTGGGGCATCAGTGACGGGTTCTTCCTGGTCCTCCTGTTCATCCTCGTCAGCCGGCTGACGGCACAGGCCTCGGACCAACCCGGCGACGTCGGGAGCCTGTTCGCGAGGCTCAGGAACGTGGTGATCCTGTTGTGGCTTGCCTATCCCGTCGTGTGGATCGTCGGGACTGAAGGTCTCGGCCTCGTCCCGCTGTACTACGAGACGGCCGCGTTCATGGTCCTCGACCT DWLFTTPLLLIDLALLAGADRNTIATLVGLDVGMIITGLVAALTTASETMRIAWWGISDGFFLVLLFILVSRLTAQASDQPGDVGSLFARLRNVVILLWLAYPVVWIVGTEGLGLVPLYYETAAFMVLD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTGG------------------------TTGTTCACGACACCGCTGCTGTTGATCGACCTGGCACTGCTA------------------------GCCGGGGCCGACCGC---AACACA------------------------------------ATCGCGACG---CTCGTTGGACTGGACGTCGGGATGATTATCACTGGTCTCGTTGCCGCG---------CTG------------------------------------------------------------------------------ACC---ACCGCG---------AGT---------------GAG---------ACGATGCGG------------------ATCGCCTGG---TGGGGCATCAGTGACGGGTTCTTCCTGGTCCTCCTGTTCATCCTC---------------GTC------AGC---CGGCTGACGGCACAGGCCTCGGACCAA---------------CCCGGCGACGTC---GGG---AGC---CTG---TTC---GCG---AGGCTC---AGGAACGTGGTGATCCTG---------------------------------------------------------------TTGTGG---------CTTGCCTATCCCGTCGTGTGGATCGTCGGGACTGAAGGT---CTCGGC---------------CTCGTCCCGCTGTACTACGAGACGGCCGCGTTCATGGTCCTCGAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DW--------LFTTPLLLIDLALL--------AGADR-NT------------IAT-LVGLDVGMIITGLVAA---L--------------------------T-TA---S-----E---TMR------IAW-WGISDGFFLVLLFIL-----V--S-RLTAQASDQ-----PGDV-G-S-L-F-A-RL-RNVVIL---------------------LW---LAYPVVWIVGTEG-LG-----LVPLYYETAAFMVLD------------------------------------------------------------------ [bacteriorhodopsin]_HM475123 [bacteriorhodopsin] clone_bR-g01_HM475123 gi|299772647|gb|HM475123| Uncultured bacterium clone bR-g01 bacteriorhodopsin (bop) gene, partial cds. Uncultured bacterium clone bR-g01 bacteriorhodopsin (bop) gene, partial cds. HM475123 [[other rhodopsin/bacteriorhodopsin-like 2]] other rhodopsin bacteriorhodopsin-like 2 bacteriorhodopsin proton pump D97 ; D108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 03-juil-10 #na saltern soil other terrestrial 23.1 120.1 One partial bacteriorhodopsin sequence of genomic DNA from saltern soil Lin,S.-J., Liao,H.-C. and Chu,W.-S. Unpublished #na #na GACTGGTTGTTCACGACGCCGCTGCTGTTGCTCGACCTGGCACTGCTGGCCGGGGCCGACCGTAACACGATCTCGACGCTCGTCGGACTGGACGTCGGGATGATCGTCACGGGCCTGGTGGCCGCGCTGACCACCGCGAGCCAGGCGATGCGGATCGCCTGGTGGGGTATCAGCTGTGGCTTCTTCCTGGTCCTGCTGTACATCCTCGTCAGCCGGCTGACCGCCCAGGCGGCCGACCAGCCGGGTGACGTGGGTAACCTGTTCGGGACGCTCAGGAACGTGGTGATCCTGCTGTGGCTGGCCTACCCGATCGTGTGGATCGTCGGGACCGAAGGCCTCGGCCTCGTCCCGCTGTACTACGAGACGGCCGCGTTCATGGTGCTCGACCT DWLFTTPLLLLDLALLAGADRNTISTLVGLDVGMIVTGLVAALTTASQAMRIAWWGISCGFFLVLLYILVSRLTAQAADQPGDVGNLFGTLRNVVILLWLAYPIVWIVGTEGLGLVPLYYETAAFMVLD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTGG------------------------TTGTTCACGACGCCGCTGCTGTTGCTCGACCTGGCACTGCTG------------------------GCCGGGGCCGACCGT---AACACG------------------------------------ATCTCGACG---CTCGTCGGACTGGACGTCGGGATGATCGTCACGGGCCTGGTGGCCGCG---------CTG------------------------------------------------------------------------------ACC---ACCGCG---------AGC---------------CAG---------GCGATGCGG------------------ATCGCCTGG---TGGGGTATCAGCTGTGGCTTCTTCCTGGTCCTGCTGTACATCCTC---------------GTC------AGC---CGGCTGACCGCCCAGGCGGCCGACCAG---------------CCGGGTGACGTG---GGT---AAC---CTG---TTC---GGG---ACGCTC---AGGAACGTGGTGATCCTG---------------------------------------------------------------CTGTGG---------CTGGCCTACCCGATCGTGTGGATCGTCGGGACCGAAGGC---CTCGGC---------------CTCGTCCCGCTGTACTACGAGACGGCCGCGTTCATGGTGCTCGAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DW--------LFTTPLLLLDLALL--------AGADR-NT------------IST-LVGLDVGMIVTGLVAA---L--------------------------T-TA---S-----Q---AMR------IAW-WGISCGFFLVLLYIL-----V--S-RLTAQAADQ-----PGDV-G-N-L-F-G-TL-RNVVIL---------------------LW---LAYPIVWIVGTEG-LG-----LVPLYYETAAFMVLD------------------------------------------------------------------ [bacteriorhodopsin]_HM475125 [bacteriorhodopsin] clone_bR-g05_HM475125 gi|299772651|gb|HM475125| Uncultured bacterium clone bR-g05 bacteriorhodopsin (bop) gene, partial cds. Uncultured bacterium clone bR-g05 bacteriorhodopsin (bop) gene, partial cds. HM475125 [[other rhodopsin/bacteriorhodopsin-like 2]] other rhodopsin bacteriorhodopsin-like 2 bacteriorhodopsin proton pump D97 ; D108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 03-juil-10 #na saltern soil other terrestrial 23.1 120.1 One partial bacteriorhodopsin sequence of genomic DNA from saltern soil Lin,S.-J., Liao,H.-C. and Chu,W.-S. Unpublished #na #na GACTGGCTGTTCACGACGCCCTTGCTCCTGTTGGACCTGGCACTGCTGGCCGGGGCCGACCGCAACACCATTTCGACGCTCGTCGGGCTGGACGTCGGGATGATCGTCACGGGACTGGTCGCCGCGCTGACCACCGCGAGCCAGGCGATGCGGATCGCCTGGTGGGGGATCAGCTGTGGCTTCTTCCTGGTCCTGCTGTACATCCTCGTCAGCCGGCTGACCGCGCAGGCGGCCGATCGTCCGGGTGACGTGGGCAACCTGTTCGGGACGCTCAGAAACGTGGTGATCCTACTGTGGCTGGCCTACCCGATCGTGTGGATCGTCGGGACCGAAGGGCTCGGTCTCGTCCCGCTGTACTACGAGACGGCCGCGTTCATGGTGCTCGACCT DWLFTTPLLLLDLALLAGADRNTISTLVGLDVGMIVTGLVAALTTASQAMRIAWWGISCGFFLVLLYILVSRLTAQAADRPGDVGNLFGTLRNVVILLWLAYPIVWIVGTEGLGLVPLYYETAAFMVLD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTGG------------------------CTGTTCACGACGCCCTTGCTCCTGTTGGACCTGGCACTGCTG------------------------GCCGGGGCCGACCGC---AACACC------------------------------------ATTTCGACG---CTCGTCGGGCTGGACGTCGGGATGATCGTCACGGGACTGGTCGCCGCG---------CTG------------------------------------------------------------------------------ACC---ACCGCG---------AGC---------------CAG---------GCGATGCGG------------------ATCGCCTGG---TGGGGGATCAGCTGTGGCTTCTTCCTGGTCCTGCTGTACATCCTC---------------GTC------AGC---CGGCTGACCGCGCAGGCGGCCGATCGT---------------CCGGGTGACGTG---GGC---AAC---CTG---TTC---GGG---ACGCTC---AGAAACGTGGTGATCCTA---------------------------------------------------------------CTGTGG---------CTGGCCTACCCGATCGTGTGGATCGTCGGGACCGAAGGG---CTCGGT---------------CTCGTCCCGCTGTACTACGAGACGGCCGCGTTCATGGTGCTCGAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DW--------LFTTPLLLLDLALL--------AGADR-NT------------IST-LVGLDVGMIVTGLVAA---L--------------------------T-TA---S-----Q---AMR------IAW-WGISCGFFLVLLYIL-----V--S-RLTAQAADR-----PGDV-G-N-L-F-G-TL-RNVVIL---------------------LW---LAYPIVWIVGTEG-LG-----LVPLYYETAAFMVLD------------------------------------------------------------------ [bacteriorhodopsin]_HM475122 [bacteriorhodopsin] clone_bR-f02_HM475122 gi|299772645|gb|HM475122| Uncultured bacterium clone bR-f02 bacteriorhodopsin (bop) gene, partial cds. Uncultured bacterium clone bR-f02 bacteriorhodopsin (bop) gene, partial cds. HM475122 [[other rhodopsin/bacteriorhodopsin-like 2]] other rhodopsin bacteriorhodopsin-like 2 bacteriorhodopsin proton pump D97 ; D108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 03-juil-10 #na saltern soil other terrestrial 23.1 120.1 One partial bacteriorhodopsin sequence of genomic DNA from saltern soil Lin,S.-J., Liao,H.-C. and Chu,W.-S. Unpublished #na #na GACTGGTTGTTCACGACACCCCTGCTATTGCTCGACCTGGCACTGCTGGCCGGGGCCGATCGCAACACGATCGCGACGCTCGTCGGACTGGACGTCGGAATGATCATCACGGGATTGGTCGCTGCGCTGACCACTGCGAGTCAGGCGATGCGGATCGCCTGGTGGGGTATCAGCTGTGGCTTCTTCCTGGTCCTGCTGTACATCCTCGTCAGCCGGCTGACCGCCCAGGCGGCCGACCGGCCCGGTGACGTGGGTAACCTGTTTGGCACCCTCAGGAACGTGGTGATCCTGCTGTGGCTGGCCTACCCCATCGTGTGGATCGTCGGGACCGAGGGACTCGGCTACCTCCCGCTGTACTACGAGACGGCCGCGTTCATGGTGCTCGACCT DWLFTTPLLLLDLALLAGADRNTIATLVGLDVGMIITGLVAALTTASQAMRIAWWGISCGFFLVLLYILVSRLTAQAADRPGDVGNLFGTLRNVVILLWLAYPIVWIVGTEGLGYLPLYYETAAFMVLD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTGG------------------------TTGTTCACGACACCCCTGCTATTGCTCGACCTGGCACTGCTG------------------------GCCGGGGCCGATCGC---AACACG------------------------------------ATCGCGACG---CTCGTCGGACTGGACGTCGGAATGATCATCACGGGATTGGTCGCTGCG---------CTG------------------------------------------------------------------------------ACC---ACTGCG---------AGT---------------CAG---------GCGATGCGG------------------ATCGCCTGG---TGGGGTATCAGCTGTGGCTTCTTCCTGGTCCTGCTGTACATCCTC---------------GTC------AGC---CGGCTGACCGCCCAGGCGGCCGACCGG---------------CCCGGTGACGTG---GGT---AAC---CTG---TTT---GGC---ACCCTC---AGGAACGTGGTGATCCTG---------------------------------------------------------------CTGTGG---------CTGGCCTACCCCATCGTGTGGATCGTCGGGACCGAGGGA---CTCGGC---------------TACCTCCCGCTGTACTACGAGACGGCCGCGTTCATGGTGCTCGAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DW--------LFTTPLLLLDLALL--------AGADR-NT------------IAT-LVGLDVGMIITGLVAA---L--------------------------T-TA---S-----Q---AMR------IAW-WGISCGFFLVLLYIL-----V--S-RLTAQAADR-----PGDV-G-N-L-F-G-TL-RNVVIL---------------------LW---LAYPIVWIVGTEG-LG-----YLPLYYETAAFMVLD------------------------------------------------------------------ [bacteriorhodopsin]_HM475130 [bacteriorhodopsin] clone_bR-h09_HM475130 gi|299772661|gb|HM475130| Uncultured bacterium clone bR-h09 bacteriorhodopsin (bop) gene, partial cds. Uncultured bacterium clone bR-h09 bacteriorhodopsin (bop) gene, partial cds. HM475130 [[other rhodopsin/bacteriorhodopsin-like 2]] other rhodopsin bacteriorhodopsin-like 2 bacteriorhodopsin proton pump D97 ; D108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 03-juil-10 #na saltern soil other terrestrial 23.1 120.1 One partial bacteriorhodopsin sequence of genomic DNA from saltern soil Lin,S.-J., Liao,H.-C. and Chu,W.-S. Unpublished #na #na GACTGGTTGTTCACGACACCGCTCCTGTTGCTCGACCTGGCGCTTCTGGCCGGGGCCGACCGCAACACGACCGCGACGCTGATCGGACTGGACGTCGGGATGATCGTCACCGGCCTCGTCGCCGCGCTGACTACCGCGAGCGTGGCGATGCGTATCGCCTGGTGGGGAATCAGCTGTGGGTTCTTCGTCGTCTTGCTGTACATCCTCGTCAGCCGGCTGACCGCACAGGCGGCCGACCGGCCCGGTGACGTGGGCTCCCTGTTCGGGACGCTCAGGAACGCGGTGATCCTGCTGTGGCTGGCCTACCCGATCGTGTGGATCGTCGGGACCGAGGGGCTCGGCTACCTCCCGCTGTACTACGAGACGGCCGCCTTCATGGTGCTCGACCT DWLFTTPLLLLDLALLAGADRNTTATLIGLDVGMIVTGLVAALTTASVAMRIAWWGISCGFFVVLLYILVSRLTAQAADRPGDVGSLFGTLRNAVILLWLAYPIVWIVGTEGLGYLPLYYETAAFMVLD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTGG------------------------TTGTTCACGACACCGCTCCTGTTGCTCGACCTGGCGCTTCTG------------------------GCCGGGGCCGACCGC---AACACG------------------------------------ACCGCGACG---CTGATCGGACTGGACGTCGGGATGATCGTCACCGGCCTCGTCGCCGCG---------CTG------------------------------------------------------------------------------ACT---ACCGCG---------AGC---------------GTG---------GCGATGCGT------------------ATCGCCTGG---TGGGGAATCAGCTGTGGGTTCTTCGTCGTCTTGCTGTACATCCTC---------------GTC------AGC---CGGCTGACCGCACAGGCGGCCGACCGG---------------CCCGGTGACGTG---GGC---TCC---CTG---TTC---GGG---ACGCTC---AGGAACGCGGTGATCCTG---------------------------------------------------------------CTGTGG---------CTGGCCTACCCGATCGTGTGGATCGTCGGGACCGAGGGG---CTCGGC---------------TACCTCCCGCTGTACTACGAGACGGCCGCCTTCATGGTGCTCGAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DW--------LFTTPLLLLDLALL--------AGADR-NT------------TAT-LIGLDVGMIVTGLVAA---L--------------------------T-TA---S-----V---AMR------IAW-WGISCGFFVVLLYIL-----V--S-RLTAQAADR-----PGDV-G-S-L-F-G-TL-RNAVIL---------------------LW---LAYPIVWIVGTEG-LG-----YLPLYYETAAFMVLD------------------------------------------------------------------ [bacteriorhodopsin]_HM475119 [bacteriorhodopsin] clone_bR-d12_HM475119 gi|299772639|gb|HM475119| Uncultured bacterium clone bR-d12 bacteriorhodopsin (bop) gene, partial cds. Uncultured bacterium clone bR-d12 bacteriorhodopsin (bop) gene, partial cds. HM475119 [[other rhodopsin/bacteriorhodopsin-like 2]] other rhodopsin bacteriorhodopsin-like 2 bacteriorhodopsin proton pump D97 ; D108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 03-juil-10 #na saltern soil other terrestrial 23.1 120.1 One partial bacteriorhodopsin sequence of genomic DNA from saltern soil Lin,S.-J., Liao,H.-C. and Chu,W.-S. Unpublished #na #na GACTGGTTGTTCACGACACCGCTGTTGTTGCTCGATCTGGCCCTGCTGGCCGGTGCGAATCGGAACACGATCGGGACACTCGTCGGACTCGACGTGGGGATGATCGTCACGGGATTCATCGCGACGATCATCACCACGAGTCAGGCTATGCGGATCACCTGGTGGGGGATCAGCTCCGCGTTCTTCCTCGTCTTGCTGTACGTGCTGGTGAGTCGGCTCTCAGCGCAGGCGGCGACACAGCCGGGGAACGTCGGTGACCTGTTCGGGACGCTCCGGAACCTGACCATCCTGTTGTGGACGGCCTATCCCATCGTCTGGCTTATCGGAACCGAGGGACTGGCACTCGTCCCGCTGTACTGGGAGACGGCCGCGTTCATGGTGCTCGACCT DWLFTTPLLLLDLALLAGANRNTIGTLVGLDVGMIVTGFIATIITTSQAMRITWWGISSAFFLVLLYVLVSRLSAQAATQPGNVGDLFGTLRNLTILLWTAYPIVWLIGTEGLALVPLYWETAAFMVLD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTGG------------------------TTGTTCACGACACCGCTGTTGTTGCTCGATCTGGCCCTGCTG------------------------GCCGGTGCGAATCGG---AACACG------------------------------------ATCGGGACA---CTCGTCGGACTCGACGTGGGGATGATCGTCACGGGATTCATCGCGACG---------ATC------------------------------------------------------------------------------ATC---ACCACG---------AGT---------------CAG---------GCTATGCGG------------------ATCACCTGG---TGGGGGATCAGCTCCGCGTTCTTCCTCGTCTTGCTGTACGTGCTG---------------GTG------AGT---CGGCTCTCAGCGCAGGCGGCGACACAG---------------CCGGGGAACGTC---GGT---GAC---CTG---TTC---GGG---ACGCTC---CGGAACCTGACCATCCTG---------------------------------------------------------------TTGTGG---------ACGGCCTATCCCATCGTCTGGCTTATCGGAACCGAGGGA---CTGGCA---------------CTCGTCCCGCTGTACTGGGAGACGGCCGCGTTCATGGTGCTCGAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DW--------LFTTPLLLLDLALL--------AGANR-NT------------IGT-LVGLDVGMIVTGFIAT---I--------------------------I-TT---S-----Q---AMR------ITW-WGISSAFFLVLLYVL-----V--S-RLSAQAATQ-----PGNV-G-D-L-F-G-TL-RNLTIL---------------------LW---TAYPIVWLIGTEG-LA-----LVPLYWETAAFMVLD------------------------------------------------------------------ [bacteriorhodopsin]_HM475124 [bacteriorhodopsin] clone_bR-g02_HM475124 gi|299772649|gb|HM475124| Uncultured bacterium clone bR-g02 bacteriorhodopsin (bop) gene, partial cds. Uncultured bacterium clone bR-g02 bacteriorhodopsin (bop) gene, partial cds. HM475124 [[other rhodopsin/bacteriorhodopsin-like 2]] other rhodopsin bacteriorhodopsin-like 2 bacteriorhodopsin proton pump D97 ; D108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 03-juil-10 #na saltern soil other terrestrial 23.1 120.1 One partial bacteriorhodopsin sequence of genomic DNA from saltern soil Lin,S.-J., Liao,H.-C. and Chu,W.-S. Unpublished #na #na GACTGGTTGTTCACGACACCGCTGTTGTTGCTCGATCTGGCACTGCTGGCCGGTGCGAATCGGAACACGATCGGGACACTCGTCGGGCTCGACGTGGGGATGATCGTCACGGGATTCATCGCGACGATCATCACCACGAGTCAGGCTATGCGGATCACCTGGTGGGGGATCAGCTCCGCGTTCTCCCTCGTCTTGCTGTACGTGCTGGTGAGTCGCCTCTCAGCGCAGGCGGCGACACAGCCGGGGAACGTCGGTGACCTGTTCGGGACGCTCAGGAACCTGACCATCCTGTTGTGGACGGCCTATCCCATCGTCTGGCTTATCGGAACCGAGGGACTGGCACTCGTCCCGCTGTACTGGGAGACGGCCGCGTTCATGGTGATCGACCT DWLFTTPLLLLDLALLAGANRNTIGTLVGLDVGMIVTGFIATIITTSQAMRITWWGISSAFSLVLLYVLVSRLSAQAATQPGNVGDLFGTLRNLTILLWTAYPIVWLIGTEGLALVPLYWETAAFMVID ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTGG------------------------TTGTTCACGACACCGCTGTTGTTGCTCGATCTGGCACTGCTG------------------------GCCGGTGCGAATCGG---AACACG------------------------------------ATCGGGACA---CTCGTCGGGCTCGACGTGGGGATGATCGTCACGGGATTCATCGCGACG---------ATC------------------------------------------------------------------------------ATC---ACCACG---------AGT---------------CAG---------GCTATGCGG------------------ATCACCTGG---TGGGGGATCAGCTCCGCGTTCTCCCTCGTCTTGCTGTACGTGCTG---------------GTG------AGT---CGCCTCTCAGCGCAGGCGGCGACACAG---------------CCGGGGAACGTC---GGT---GAC---CTG---TTC---GGG---ACGCTC---AGGAACCTGACCATCCTG---------------------------------------------------------------TTGTGG---------ACGGCCTATCCCATCGTCTGGCTTATCGGAACCGAGGGA---CTGGCA---------------CTCGTCCCGCTGTACTGGGAGACGGCCGCGTTCATGGTGATCGAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DW--------LFTTPLLLLDLALL--------AGANR-NT------------IGT-LVGLDVGMIVTGFIAT---I--------------------------I-TT---S-----Q---AMR------ITW-WGISSAFSLVLLYVL-----V--S-RLSAQAATQ-----PGNV-G-D-L-F-G-TL-RNLTIL---------------------LW---TAYPIVWLIGTEG-LA-----LVPLYWETAAFMVID------------------------------------------------------------------ [bacteriorhodopsin]_HM475116 [bacteriorhodopsin] clone_bR-d02_HM475116 gi|299772633|gb|HM475116| Uncultured bacterium clone bR-d02 bacteriorhodopsin (bop) gene, partial cds. Uncultured bacterium clone bR-d02 bacteriorhodopsin (bop) gene, partial cds. HM475116 [[other rhodopsin/bacteriorhodopsin-like 2]] other rhodopsin bacteriorhodopsin-like 2 bacteriorhodopsin proton pump D97 ; D108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 03-juil-10 #na saltern soil other terrestrial 23.1 120.1 One partial bacteriorhodopsin sequence of genomic DNA from saltern soil Lin,S.-J., Liao,H.-C. and Chu,W.-S. Unpublished #na #na GACTGGCTGTTCACCACACCCCTGCTGTTGCTCGACCTCGCGTTGCTGGCGAACGCCGACCGCAACACGATCGCGACGCTCATCGGGCTGGACGTCGGGATGATCATCACCGGTCTGGTCGGCGCACTCACGCAGTCGAGCGTCACCAACCGCATCTTCTGGTGGGGTATCAGCTGTGGGTTCTTCGTCGTGTTGTTGTACTTCCTGGTGAGTCGGCTCTCCGCACAGGCGTCCAGCCAGCCCGGGAGCGTGGGCTCCCTGTTCGGCACGCTCCGGAACCTCGTCATCGTCCTCTGGACGGCCTACCCCATCGTGTGGATCATCGGCACCGAGGGGCTCGGGCTCGTCGGCCTCTATCCGGAGACGGCGCTGTTCATGGTGCTCGACCT DWLFTTPLLLLDLALLANADRNTIATLIGLDVGMIITGLVGALTQSSVTNRIFWWGISCGFFVVLLYFLVSRLSAQASSQPGSVGSLFGTLRNLVIVLWTAYPIVWIIGTEGLGLVGLYPETALFMVLD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTGG------------------------CTGTTCACCACACCCCTGCTGTTGCTCGACCTCGCGTTGCTG------------------------GCGAACGCCGACCGC---AACACG------------------------------------ATCGCGACG---CTCATCGGGCTGGACGTCGGGATGATCATCACCGGTCTGGTCGGCGCA---------CTC------------------------------------------------------------------------------ACG---CAGTCG---------AGC---------------GTC---------ACCAACCGC------------------ATCTTCTGG---TGGGGTATCAGCTGTGGGTTCTTCGTCGTGTTGTTGTACTTCCTG---------------GTG------AGT---CGGCTCTCCGCACAGGCGTCCAGCCAG---------------CCCGGGAGCGTG---GGC---TCC---CTG---TTC---GGC---ACGCTC---CGGAACCTCGTCATCGTC---------------------------------------------------------------CTCTGG---------ACGGCCTACCCCATCGTGTGGATCATCGGCACCGAGGGG---CTCGGG---------------CTCGTCGGCCTCTATCCGGAGACGGCGCTGTTCATGGTGCTCGAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DW--------LFTTPLLLLDLALL--------ANADR-NT------------IAT-LIGLDVGMIITGLVGA---L--------------------------T-QS---S-----V---TNR------IFW-WGISCGFFVVLLYFL-----V--S-RLSAQASSQ-----PGSV-G-S-L-F-G-TL-RNLVIV---------------------LW---TAYPIVWIIGTEG-LG-----LVGLYPETALFMVLD------------------------------------------------------------------ [bacteriorhodopsin]_HM475114 [bacteriorhodopsin] clone_bR-a12_HM475114 gi|299772629|gb|HM475114| Uncultured bacterium clone bR-a12 bacteriorhodopsin (bop) gene, partial cds. Uncultured bacterium clone bR-a12 bacteriorhodopsin (bop) gene, partial cds. HM475114 [[other rhodopsin/bacteriorhodopsin-like 2]] other rhodopsin bacteriorhodopsin-like 2 bacteriorhodopsin proton pump D97 ; D108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 03-juil-10 #na saltern soil other terrestrial 23.1 120.1 One partial bacteriorhodopsin sequence of genomic DNA from saltern soil Lin,S.-J., Liao,H.-C. and Chu,W.-S. Unpublished #na #na GACTGGCTGTTCACGACACCGTTGCTACTGCTCGATCTCGGGCTGCTGGCGGGGGCGAACCGAAACACGATCGCGACGCTGATCGGCCTCGACGTCTTCATGATCGGGACCGGCGCGATCGCGACGTTCGCGTCCACCCCCGGAACCCGGATCGCCTGGTGGGGAATCAGCACCGGTGCCCTGCTCGCCCTGCTGTACGTTCTCGTCGGGACGCTTTCCGAGAACGCGCGCGGTCGGCCTCCCGAGGTCGCGTCGCTGTTCGGGCGGCTACGCAACCTGGTCATCGTGCTGCGGCTTCTCTACCCGGTGGTCTGGATCCTCGGCACGGAGGGAACGTTCGGTATCCTCCCACTGTACTGGGAAACCGCCGCGTTCATGGTGCTCGACCT DWLFTTPLLLLDLGLLAGANRNTIATLIGLDVFMIGTGAIATFASTPGTRIAWWGISTGALLALLYVLVGTLSENARGRPPEVASLFGRLRNLVIVLRLLYPVVWILGTEGTFGILPLYWETAAFMVLD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTGG------------------------CTGTTCACGACACCGTTGCTACTGCTCGATCTCGGGCTGCTG------------------------GCGGGGGCGAACCGA---AACACG------------------------------------ATCGCGACG---CTGATCGGCCTCGACGTCTTCATGATCGGGACCGGCGCGATCGCGACG---------TTC------------------------------------------------------------------------------GCG---TCCACC---------CCC---------------------------GGAACCCGG------------------ATCGCCTGG---TGGGGAATCAGCACCGGTGCCCTGCTCGCCCTGCTGTACGTTCTC---------------GTC------GGG---ACGCTTTCCGAGAACGCGCGCGGTCGG---------------CCTCCCGAGGTC---GCG---TCG---CTG---TTC---GGG---CGGCTA---CGCAACCTGGTCATCGTG---------------------------------------------------------------CTGCGG---------CTTCTCTACCCGGTGGTCTGGATCCTCGGCACGGAGGGAACGTTCGGT---------------ATCCTCCCACTGTACTGGGAAACCGCCGCGTTCATGGTGCTCGAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DW--------LFTTPLLLLDLGLL--------AGANR-NT------------IAT-LIGLDVFMIGTGAIAT---F--------------------------A-ST---P---------GTR------IAW-WGISTGALLALLYVL-----V--G-TLSENARGR-----PPEV-A-S-L-F-G-RL-RNLVIV---------------------LR---LLYPVVWILGTEGTFG-----ILPLYWETAAFMVLD------------------------------------------------------------------ [bacteriorhodopsin]_HM475117 [bacteriorhodopsin] clone_bR-d07_HM475117 gi|299772635|gb|HM475117| Uncultured bacterium clone bR-d07 bacteriorhodopsin (bop) gene, partial cds. Uncultured bacterium clone bR-d07 bacteriorhodopsin (bop) gene, partial cds. HM475117 [[other rhodopsin/bacteriorhodopsin-like 2]] other rhodopsin bacteriorhodopsin-like 2 bacteriorhodopsin proton pump D97 ; D108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 03-juil-10 #na saltern soil other terrestrial 23.1 120.1 One partial bacteriorhodopsin sequence of genomic DNA from saltern soil Lin,S.-J., Liao,H.-C. and Chu,W.-S. Unpublished #na #na GACTGGTTGTTCACGACACCGTTGCTACTGCTCGATCTCGGGCTGCTGGCGGGGGCGAACCGAAACACGATCGCGACGCTGATCGGCCTCGACATCTTCATGATCGGGACCGGCGCGATCGCGACGTTCGCGTCCACCCCCGGAACCCGGATCGCCTGGTGGGGAATCAGCACCGGTGCCCTGCTCGCCCTGCTGTACGTTCTCGTCGGGACGCTTTCCGAGAACGCGCGCGGTCGGCCTCCCGAGGTCGCGTCGCTGTTCGGGCGGCTACGCAACCTGGTCATCGTGCTGTGGCTTCTCTACCCGGTGGTCTGGATCCTCGGCACGGAGGGAACGTTCGGTATCCTCCCACTGTACTGGGAAACCGCCGCGTTCATGGTGCTTGACCT DWLFTTPLLLLDLGLLAGANRNTIATLIGLDIFMIGTGAIATFASTPGTRIAWWGISTGALLALLYVLVGTLSENARGRPPEVASLFGRLRNLVIVLWLLYPVVWILGTEGTFGILPLYWETAAFMVLD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTGG------------------------TTGTTCACGACACCGTTGCTACTGCTCGATCTCGGGCTGCTG------------------------GCGGGGGCGAACCGA---AACACG------------------------------------ATCGCGACG---CTGATCGGCCTCGACATCTTCATGATCGGGACCGGCGCGATCGCGACG---------TTC------------------------------------------------------------------------------GCG---TCCACC---------CCC---------------------------GGAACCCGG------------------ATCGCCTGG---TGGGGAATCAGCACCGGTGCCCTGCTCGCCCTGCTGTACGTTCTC---------------GTC------GGG---ACGCTTTCCGAGAACGCGCGCGGTCGG---------------CCTCCCGAGGTC---GCG---TCG---CTG---TTC---GGG---CGGCTA---CGCAACCTGGTCATCGTG---------------------------------------------------------------CTGTGG---------CTTCTCTACCCGGTGGTCTGGATCCTCGGCACGGAGGGAACGTTCGGT---------------ATCCTCCCACTGTACTGGGAAACCGCCGCGTTCATGGTGCTTGAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DW--------LFTTPLLLLDLGLL--------AGANR-NT------------IAT-LIGLDIFMIGTGAIAT---F--------------------------A-ST---P---------GTR------IAW-WGISTGALLALLYVL-----V--G-TLSENARGR-----PPEV-A-S-L-F-G-RL-RNLVIV---------------------LW---LLYPVVWILGTEGTFG-----ILPLYWETAAFMVLD------------------------------------------------------------------ [bacteriorhodopsin]_HM475118 [bacteriorhodopsin] clone_bR-d10_HM475118 gi|299772637|gb|HM475118| Uncultured bacterium clone bR-d10 bacteriorhodopsin (bop) gene, partial cds. Uncultured bacterium clone bR-d10 bacteriorhodopsin (bop) gene, partial cds. HM475118 [[other rhodopsin/bacteriorhodopsin-like 2]] other rhodopsin bacteriorhodopsin-like 2 bacteriorhodopsin proton pump D97 ; D108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 03-juil-10 #na saltern soil other terrestrial 23.1 120.1 One partial bacteriorhodopsin sequence of genomic DNA from saltern soil Lin,S.-J., Liao,H.-C. and Chu,W.-S. Unpublished #na #na GACTGGCTGTTCACGACACCGTTGCTACTGCTCGATCTCGGGCTGCTAGCGGGGGCGAACCGAAACACGATCGCGACGCTGATCGGCCTCGACGTCTTCATGATCGGGACCGGCGCGATCGCGACGTTCGCGTCCACTCCCGGAACCCGGATCGCCTGGTGGGGAATCAGCACCGGCGCCCTGCTCGCCCTGCTGTACGTCCTCGTCGGGACGCTCTCCGAGAACGCGCGCGGTCGCTCTCCGGAGGTGGCGTCGCTGTTCGGACGGCTGCGCAACCTGGTCATCGTGCTGTGGCTCCTCTACCCGGTTGTCTGGATCCTCGGCACGGAGGGTACCTTCGGTATCCTCCCGCTGTACTGGGAAACCGCCGCGTTCATGGTCCTCGACGT DWLFTTPLLLLDLGLLAGANRNTIATLIGLDVFMIGTGAIATFASTPGTRIAWWGISTGALLALLYVLVGTLSENARGRSPEVASLFGRLRNLVIVLWLLYPVVWILGTEGTFGILPLYWETAAFMVLD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTGG------------------------CTGTTCACGACACCGTTGCTACTGCTCGATCTCGGGCTGCTA------------------------GCGGGGGCGAACCGA---AACACG------------------------------------ATCGCGACG---CTGATCGGCCTCGACGTCTTCATGATCGGGACCGGCGCGATCGCGACG---------TTC------------------------------------------------------------------------------GCG---TCCACT---------CCC---------------------------GGAACCCGG------------------ATCGCCTGG---TGGGGAATCAGCACCGGCGCCCTGCTCGCCCTGCTGTACGTCCTC---------------GTC------GGG---ACGCTCTCCGAGAACGCGCGCGGTCGC---------------TCTCCGGAGGTG---GCG---TCG---CTG---TTC---GGA---CGGCTG---CGCAACCTGGTCATCGTG---------------------------------------------------------------CTGTGG---------CTCCTCTACCCGGTTGTCTGGATCCTCGGCACGGAGGGTACCTTCGGT---------------ATCCTCCCGCTGTACTGGGAAACCGCCGCGTTCATGGTCCTCGAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DW--------LFTTPLLLLDLGLL--------AGANR-NT------------IAT-LIGLDVFMIGTGAIAT---F--------------------------A-ST---P---------GTR------IAW-WGISTGALLALLYVL-----V--G-TLSENARGR-----SPEV-A-S-L-F-G-RL-RNLVIV---------------------LW---LLYPVVWILGTEGTFG-----ILPLYWETAAFMVLD------------------------------------------------------------------ [bacteriorhodopsin]_HM475131 [bacteriorhodopsin] clone_bR-h10_HM475131 gi|299772663|gb|HM475131| Uncultured bacterium clone bR-h10 bacteriorhodopsin (bop) gene, partial cds. Uncultured bacterium clone bR-h10 bacteriorhodopsin (bop) gene, partial cds. HM475131 [[other rhodopsin/bacteriorhodopsin-like 2]] other rhodopsin bacteriorhodopsin-like 2 bacteriorhodopsin proton pump D97 ; D108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 03-juil-10 #na saltern soil other terrestrial 23.1 120.1 One partial bacteriorhodopsin sequence of genomic DNA from saltern soil Lin,S.-J., Liao,H.-C. and Chu,W.-S. Unpublished #na #na GACTGGTTGTTCACGACACCGTTGCTGCTGCTCGACCTCGGGCTGCTGGCAGGAGCGAACCGACACACGATCGCGACGCTGATCGGCCTCGACGTCTTCATGATCGGGACCGGCGCGATCGCGGCGTTCGCTGCCACCCCCGGCACCCGGATCGCCTGGTGGGGTATCAGCACCGGCGCCCTGCTCGCCCTGCTGTACGTCCTCGTCGGGACGCTCTCCGAGAACGCGCGCGATCAGTCTCCCGAGGTGGCGTCGCTGTTCGGGCGACTACGCAACCTGGTCATGGTGCTGTGGCTCCTCTACCCGGTGGTCTGGATCCTCGGCACGGAGGGGACCTTCGGTATCCTCCCGCTGTACTGGGAAACCGCGGCGTTCATGGTGCTTGACCT DWLFTTPLLLLDLGLLAGANRHTIATLIGLDVFMIGTGAIAAFAATPGTRIAWWGISTGALLALLYVLVGTLSENARDQSPEVASLFGRLRNLVMVLWLLYPVVWILGTEGTFGILPLYWETAAFMVLD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTGG------------------------TTGTTCACGACACCGTTGCTGCTGCTCGACCTCGGGCTGCTG------------------------GCAGGAGCGAACCGA---CACACG------------------------------------ATCGCGACG---CTGATCGGCCTCGACGTCTTCATGATCGGGACCGGCGCGATCGCGGCG---------TTC------------------------------------------------------------------------------GCT---GCCACC---------CCC---------------------------GGCACCCGG------------------ATCGCCTGG---TGGGGTATCAGCACCGGCGCCCTGCTCGCCCTGCTGTACGTCCTC---------------GTC------GGG---ACGCTCTCCGAGAACGCGCGCGATCAG---------------TCTCCCGAGGTG---GCG---TCG---CTG---TTC---GGG---CGACTA---CGCAACCTGGTCATGGTG---------------------------------------------------------------CTGTGG---------CTCCTCTACCCGGTGGTCTGGATCCTCGGCACGGAGGGGACCTTCGGT---------------ATCCTCCCGCTGTACTGGGAAACCGCGGCGTTCATGGTGCTTGAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DW--------LFTTPLLLLDLGLL--------AGANR-HT------------IAT-LIGLDVFMIGTGAIAA---F--------------------------A-AT---P---------GTR------IAW-WGISTGALLALLYVL-----V--G-TLSENARDQ-----SPEV-A-S-L-F-G-RL-RNLVMV---------------------LW---LLYPVVWILGTEGTFG-----ILPLYWETAAFMVLD------------------------------------------------------------------ [bacteriorhodopsin]_D31880 [bacteriorhodopsin] Haloarcula_argentinos_HACCOP1_D31880 gi|1060882|gb|D31880| Haloarcula argentinos cop1 gene for cruxrhodopsin-1, complete cds. Haloarcula argentinos cop1 gene for cruxrhodopsin-1, complete cds. D31880 [[other rhodopsin/bacteriorhodopsin-like 2]] other rhodopsin bacteriorhodopsin-like 2 cruxrhodopsin proton pump D97 ; D108 light-energy conversion (ion transport) Green (L105) [Archaea/Euryarchaeota/Halobacteria/Halobacteriales/Halobacteriaceae/Haloarcula] #na genomic DNA strain 07-FEB-1999 #na #na other marine -42.498662 -64.000096 The novel ion pump rhodopsins from Haloarcula form a family independent from both the bacteriorhodopsin and archaerhodopsin families/tribes Tateno,M., Ihara,K. and Mukohata,Y. Arch. Biochem. Biophys. 315 (1), 127-132 (1994) 7979388 #na CGTTGCCCTCCTACACTAGAACGCACTATGCCAGAACCAGGGAGTGAAGCGATATGGCTGTGGTTAGGTACAGCGGGCATGTTCCTCGGCATGCTCTACTTCATCGCGCGCGGCTGGGGTGAGACCGACAGTAGGCGTCAAAAGTTCTACATCGCGACAATACTCATCACGGCAATCGCGTTCGTGAATTACCTCGCGATGGCGCTTGGCTTCGGGTTGACGATCGTCGAGTTCGCCGGCGAAGAGCACCCCATCTACTGGGCCCGATACAGTGACTGGTTGTTCACGACGCCGTTACTGTTGTACGACCTCGGGTTGCTTGCCGGGGCAGATCGTAACACTATCACCTCGCTCGTCAGCCTCGACGTGCTGATGATCGGGACCGGGCTGGTCGCGACGCTGAGCCCAGGAAGCGGCGTGCTGTCGGCCGGTGCAGAACGGCTGGTCTGGTGGGGCATCAGTACCGCCTTCCTGCTGGTCCTGCTGTACTTCCTGTTCAGCTCGCTGTCCGGTCGAGTCGCAGACTTGCCCAGTGACACGCGTAGCACCTTCAAGACGCTACGAAACCTCGTGACTGTCGTGTGGTTGGTGTACCCGGTGTGGTGGCTCATCGGGACTGAGGGGATCGGCCTCGTCGGGATCGGTATCGAGACGGCCGGCTTCATGGTCATCGACCTGACCGCCAAGGTCGGCTTCGGTATCATCCTGCTCCGGAGCCACGGTGTGCTCGACGGCGCGGCCGAGACGACCGGAACTGGCGCAACGCCTGCAGACGAC RCPPTLERTMPEPGSEAIWLWLGTAGMFLGMLYFIARGWGETDSRRQKFYIATILITAIAFVNYLAMALGFGLTIVEFAGEEHPIYWARYSDWLFTTPLLLYDLGLLAGADRNTITSLVSLDVLMIGTGLVATLSPGSGVLSAGAERLVWWGISTAFLLVLLYFLFSSLSGRVADLPSDTRSTFKTLRNLVTVVWLVYPVWWLIGTEGIGLVGIGIETAGFMVIDLTAKVGFGIILLRSHGVLDGAAETTGTGATPADD ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTGCCCTCCTACACTAGAACGCACTATGCCAGAACCAGGGAGTGAAGCGATATGGCTGTGGTTAGGTACAGCGGGCATGTTCCTCGGCATGCTCTACTTCATCGCGCGCGGCTGGGGTGAGACCGACAGTAGGCGTCAAAAGTTCTACATCGCGACAATACTCATCACGGCAATCGCGTTCGTGAATTACCTCGCGATGGCGCTTGGCTTCGGG------------------------------TTGACGATCGTCGAGTTCGCCGGCGAAGAGCACCCCATCTACTGGGCCCGATACAGTGACTGG------------------------TTGTTCACGACGCCGTTACTGTTGTACGACCTCGGGTTGCTT------------------------GCCGGGGCAGATCGT---AACACT------------------------------------ATCACCTCG---CTCGTCAGCCTCGACGTGCTGATGATCGGGACCGGGCTGGTCGCGACG---------CTG------------------------------------------------------------------------------AGC---CCAGGA---------AGCGGCGTGCTGTCGGCCGGT---------GCAGAACGG------------------CTGGTCTGG---TGGGGCATCAGTACCGCCTTCCTGCTGGTCCTGCTGTACTTCCTG---------------TTC------AGC---TCGCTGTCCGGTCGAGTCGCAGACTTG---------------CCCAGTGACACG---CGT---AGC---ACC---TTC---AAG---ACGCTA---CGAAACCTCGTGACTGTC---------------------------------------------------------------GTGTGG---------TTGGTGTACCCGGTGTGGTGGCTCATCGGGACTGAGGGG---ATCGGC---------------CTCGTCGGGATCGGTATCGAGACGGCCGGCTTCATGGTCATCGACCTGACCGCCAAGGTCGGCTTCGGTATCATCCTGCTCCGGAGCCACGGTGTGCTCGACGGCGCGGCCGAGACGACCGGAACTGGCGCAACGCCTGCAGACGAC------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------RCPPTLERTMPEPGSEAIWLWLGTAGMFLGMLYFIARGWGETDSRRQKFYIATILITAIAFVNYLAMALGFG----------LTIVEFAGEEHPIYWARYSDW--------LFTTPLLLYDLGLL--------AGADR-NT------------ITS-LVSLDVLMIGTGLVAT---L--------------------------S-PG---SGVLSAG---AER------LVW-WGISTAFLLVLLYFL-----F--S-SLSGRVADL-----PSDT-R-S-T-F-K-TL-RNLVTV---------------------VW---LVYPVWWLIGTEG-IG-----LVGIGIETAGFMVIDLTAKVGFGIILLRSHGVLDGAAETTGTGATPADD-------------------------------- [bacteriorhodopsin]_AB029320 [bacteriorhodopsin] Haloarcula_japonica_AB029320 gi|5263172|gb|AB029320| Haloarcula japonica gene for cruxrhodopsin, complete cds. Haloarcula japonica gene for cruxrhodopsin, complete cds. AB029320 [[other rhodopsin/bacteriorhodopsin-like 2]] other rhodopsin bacteriorhodopsin-like 2 cruxrhodopsin proton pump D97 ; D108 light-energy conversion (ion transport) Green (L105) [Archaea/Euryarchaeota/Halobacteria/Halobacteriales/Halobacteriaceae/Haloarcula] taxon:29282 genomic DNA strain 20-APR-2005 #na #na other terrestrial 37.33 137 Primary structure of the novel bacterial rhodopsin from extremely halophilic archaeon Haloarcula japonica strain TR-1 Yatsunami,R., Kawakami,T., Ohtani,H. and Nakamura,S. Nucleic Acids Symp. Ser. 37, 111-112 (1997) 9586024 #na CTACCTAGGATAAAGTGCACTATGCCAGAACCAGGGAGTGAAGCAATATGGCTGTGGTTAGGTACAGCGGGCATGTTCCTCGGCATGCTATACTTCATCGGGCGCGGCTGGGGTGAAACCGACAGCCGGCGGCAAAAGTTCTACATCGCGACAATACTGATCACGGCAATCGCGTTCGTGAATTACCTCGCGATGGCGCTTGGCTTCGGGTTGACGATCGTCGAGTTCGCCGGCGAGGAGCACCCCATCTACTGGGCGCGATACAGTGACTGGTTGTTCACCACGCCGTTGCTGTTGTACGACCTCGGGTTGCTTGCGGGGGCAGACCGCAACACCATCGCCTCGCTCGTCAGCCTCGACGTGCTGATGATCGGGACCGGACTGGTCGCGACGCTGAGCGCAGGCAGTGGTGTGCTGTCGGCCGGCGCGGAACGGCTGGTCTGGTGGGGTATCAGTACCGCCTTCCTGCTGGTCCTGCTGTACTTCCTGTTCAGTTCGCTGTCCGGTCGGGTCGCAGACCTGCCCAGTGACACGCGTAGCACCTTCAAGACGCTACGGAACCTCGTAACCGTCGTGTGGTTGGTGTACCCGGTGTGGTGGCTCATCGGGACTGAGGGTCTCGGCCTCGTCGGTATCGGGATCGAGACGGCCGGCTTCATGGTCATCGACCTGACCGCCAAGGTCGGCTTCGGTATCATCCTGCTCCGGAGCCACGGCGTGCTCGATGGCGCGGCCGAGACGACTGGTGCCGGCGCGACGGCCACGGCCGAC LPRIKCTMPEPGSEAIWLWLGTAGMFLGMLYFIGRGWGETDSRRQKFYIATILITAIAFVNYLAMALGFGLTIVEFAGEEHPIYWARYSDWLFTTPLLLYDLGLLAGADRNTIASLVSLDVLMIGTGLVATLSAGSGVLSAGAERLVWWGISTAFLLVLLYFLFSSLSGRVADLPSDTRSTFKTLRNLVTVVWLVYPVWWLIGTEGLGLVGIGIETAGFMVIDLTAKVGFGIILLRSHGVLDGAAETTGAGATATAD ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACCTAGGATAAAGTGCACTATGCCAGAACCAGGGAGTGAAGCAATATGGCTGTGGTTAGGTACAGCGGGCATGTTCCTCGGCATGCTATACTTCATCGGGCGCGGCTGGGGTGAAACCGACAGCCGGCGGCAAAAGTTCTACATCGCGACAATACTGATCACGGCAATCGCGTTCGTGAATTACCTCGCGATGGCGCTTGGCTTCGGG------------------------------TTGACGATCGTCGAGTTCGCCGGCGAGGAGCACCCCATCTACTGGGCGCGATACAGTGACTGG------------------------TTGTTCACCACGCCGTTGCTGTTGTACGACCTCGGGTTGCTT------------------------GCGGGGGCAGACCGC---AACACC------------------------------------ATCGCCTCG---CTCGTCAGCCTCGACGTGCTGATGATCGGGACCGGACTGGTCGCGACG---------CTG------------------------------------------------------------------------------AGC---GCAGGC---------AGTGGTGTGCTGTCGGCCGGC---------GCGGAACGG------------------CTGGTCTGG---TGGGGTATCAGTACCGCCTTCCTGCTGGTCCTGCTGTACTTCCTG---------------TTC------AGT---TCGCTGTCCGGTCGGGTCGCAGACCTG---------------CCCAGTGACACG---CGT---AGC---ACC---TTC---AAG---ACGCTA---CGGAACCTCGTAACCGTC---------------------------------------------------------------GTGTGG---------TTGGTGTACCCGGTGTGGTGGCTCATCGGGACTGAGGGT---CTCGGC---------------CTCGTCGGTATCGGGATCGAGACGGCCGGCTTCATGGTCATCGACCTGACCGCCAAGGTCGGCTTCGGTATCATCCTGCTCCGGAGCCACGGCGTGCTCGATGGCGCGGCCGAGACGACTGGTGCCGGCGCGACGGCCACGGCCGAC------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------LPRIKCTMPEPGSEAIWLWLGTAGMFLGMLYFIGRGWGETDSRRQKFYIATILITAIAFVNYLAMALGFG----------LTIVEFAGEEHPIYWARYSDW--------LFTTPLLLYDLGLL--------AGADR-NT------------IAS-LVSLDVLMIGTGLVAT---L--------------------------S-AG---SGVLSAG---AER------LVW-WGISTAFLLVLLYFL-----F--S-SLSGRVADL-----PSDT-R-S-T-F-K-TL-RNLVTV---------------------VW---LVYPVWWLIGTEG-LG-----LVGIGIETAGFMVIDLTAKVGFGIILLRSHGVLDGAAETTGAGATATAD-------------------------------- [bacteriorhodopsin]_D31882 [bacteriorhodopsin] Haloarcula_vallismortis_D31882 gi|1769807|gb|D31882| Haloarcula vallismortis cop3 gene for cruxrhodopsin-3, complete cds. Haloarcula vallismortis cop3 gene for cruxrhodopsin-3, complete cds. D31882 [[other rhodopsin/bacteriorhodopsin-like 2]] other rhodopsin bacteriorhodopsin-like 2 cruxrhodopsin proton pump D97 ; D108 light-energy conversion (ion transport) Green (L105) [Archaea/Euryarchaeota/Halobacteria/Halobacteriales/Halobacteriaceae/Haloarcula] taxon:28442 genomic DNA strain 07-FEB-1999 #na #na #na #na #na Novel bacterial rhodopsins from Haloarcula vallismortis Kitajima,T., Hirayama,J., Ihara,K., Sugiyama,Y., Kamo,N. and Mukohata,Y. Biochem. Biophys. Res. Commun. 220 (2), 341-345 (1996) 8645307 #na ATACATAATACATATTGCACTATGCCAGCACCAGAGGGCGAAGCAATATGGTTGTGGTTAGGTACAGCGGGCATGTTCCTCGGCATGCTCTACTTCATCGCGCGCGGCTGGGGTGAAACCGACAGCCGGCGTCAGAAGTTCTACATCGCGACAATACTTATCACGGCAATCGCGTTCGTGAATTACCTCGCGATGGCGCTCGGGTTCGGGCTGACAATCGTCGAGATCGCCGGAGAGCAACGCCCCATCTACTGGGCGCGATACAGCGACTGGTTGTTTACGACGCCGTTGCTGTTGTATGACCTCGGACTGCTTGCCGGGGCAGACCGTAACACCATTAGCTCGCTCGTCAGCCTCGACGTGCTGATGATCGGGACCGGTCTGGTCGCGACGCTGAGTGCGGGAAGTGGCGTGCTGTCGGCCGGCGCGGAACGGCTGGTCTGGTGGGGCATCAGTACCGCCTTCCTGCTGGTCCTGCTGTACTTCCTGTTCAGTTCGCTATCCGGCCGGGTCGCGGACCTGCCAAGCGATACGCGTAGCACGTTCAAGACGTTGCGCAACCTCGTCACTGTCGTCTGGCTGGTCTACCCAGTCTGGTGGCTCGTCGGCACTGAGGGCATCGGCCTCGTCGGTATCGGCATCGAGACGGCCGGTTTCATGGTCATCGACCTCGTTGCGAAGGTCGGCTTCGGTATCATCCTGCTCCGGAGCCACGGCGTGCTTGACGGGGCGGCCGAGACGACCGGCGCCGGTGCGACGGCAACGGCCGAC IHNTYCTMPAPEGEAIWLWLGTAGMFLGMLYFIARGWGETDSRRQKFYIATILITAIAFVNYLAMALGFGLTIVEIAGEQRPIYWARYSDWLFTTPLLLYDLGLLAGADRNTISSLVSLDVLMIGTGLVATLSAGSGVLSAGAERLVWWGISTAFLLVLLYFLFSSLSGRVADLPSDTRSTFKTLRNLVTVVWLVYPVWWLVGTEGIGLVGIGIETAGFMVIDLVAKVGFGIILLRSHGVLDGAAETTGAGATATAD ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACATAATACATATTGCACTATGCCAGCACCAGAGGGCGAAGCAATATGGTTGTGGTTAGGTACAGCGGGCATGTTCCTCGGCATGCTCTACTTCATCGCGCGCGGCTGGGGTGAAACCGACAGCCGGCGTCAGAAGTTCTACATCGCGACAATACTTATCACGGCAATCGCGTTCGTGAATTACCTCGCGATGGCGCTCGGGTTCGGG------------------------------CTGACAATCGTCGAGATCGCCGGAGAGCAACGCCCCATCTACTGGGCGCGATACAGCGACTGG------------------------TTGTTTACGACGCCGTTGCTGTTGTATGACCTCGGACTGCTT------------------------GCCGGGGCAGACCGT---AACACC------------------------------------ATTAGCTCG---CTCGTCAGCCTCGACGTGCTGATGATCGGGACCGGTCTGGTCGCGACG---------CTG------------------------------------------------------------------------------AGT---GCGGGA---------AGTGGCGTGCTGTCGGCCGGC---------GCGGAACGG------------------CTGGTCTGG---TGGGGCATCAGTACCGCCTTCCTGCTGGTCCTGCTGTACTTCCTG---------------TTC------AGT---TCGCTATCCGGCCGGGTCGCGGACCTG---------------CCAAGCGATACG---CGT---AGC---ACG---TTC---AAG---ACGTTG---CGCAACCTCGTCACTGTC---------------------------------------------------------------GTCTGG---------CTGGTCTACCCAGTCTGGTGGCTCGTCGGCACTGAGGGC---ATCGGC---------------CTCGTCGGTATCGGCATCGAGACGGCCGGTTTCATGGTCATCGACCTCGTTGCGAAGGTCGGCTTCGGTATCATCCTGCTCCGGAGCCACGGCGTGCTTGACGGGGCGGCCGAGACGACCGGCGCCGGTGCGACGGCAACGGCCGAC------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------IHNTYCTMPAPEGEAIWLWLGTAGMFLGMLYFIARGWGETDSRRQKFYIATILITAIAFVNYLAMALGFG----------LTIVEIAGEQRPIYWARYSDW--------LFTTPLLLYDLGLL--------AGADR-NT------------ISS-LVSLDVLMIGTGLVAT---L--------------------------S-AG---SGVLSAG---AER------LVW-WGISTAFLLVLLYFL-----F--S-SLSGRVADL-----PSDT-R-S-T-F-K-TL-RNLVTV---------------------VW---LVYPVWWLVGTEG-IG-----LVGIGIETAGFMVIDLVAKVGFGIILLRSHGVLDGAAETTGAGATATAD-------------------------------- [bacteriorhodopsin]_HM475112 [bacteriorhodopsin] clone_bR-a06_HM475112 gi|299772625|gb|HM475112| Uncultured bacterium clone bR-a06 bacteriorhodopsin (bop) gene, partial cds. Uncultured bacterium clone bR-a06 bacteriorhodopsin (bop) gene, partial cds. HM475112 [[other rhodopsin/bacteriorhodopsin-like 2]] other rhodopsin bacteriorhodopsin-like 2 bacteriorhodopsin proton pump D97 ; D108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 03-juil-10 #na saltern soil other terrestrial 23.1 120.1 One partial bacteriorhodopsin sequence of genomic DNA from saltern soil Lin,S.-J., Liao,H.-C. and Chu,W.-S. Unpublished #na #na GACTGGCTGTTCACGACACCGTTGCTGTTGTACGACCTCGGGTTGCTTGCCGGGGCAGACCGTAACACAATCGCATCGCTCGTCGGCCTCGACGTGCTGATGATCGGCACCGGTCTGGTCGCGACGCTGAGCGCGGGAAGCGGCGTGCTGTCTGCCGGCGCGGAACGGCTGATCTGGTGGGGCATCAGTACCGCCTTCCTGCTGGTCCTGCTGTACTTCCTGTTCAGCTCGCTGTCCGGCCGGGTCGCAAACCTACCAAGCGATACGCGTAGCACGTTCAAGACGTTGCGCAACCTCGTGACCGTCGTCTGGCTGGTCTACCCAGTCTGGTGGCTTATTGGTACCGAGGGCGTCGGCCTCGTCGGTATCGGGATCGAGACGGCCGGCTTCATGGTCCTCGACG DWLFTTPLLLYDLGLLAGADRNTIASLVGLDVLMIGTGLVATLSAGSGVLSAGAERLIWWGISTAFLLVLLYFLFSSLSGRVANLPSDTRSTFKTLRNLVTVVWLVYPVWWLIGTEGVGLVGIGIETAGFMVLD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTGG------------------------CTGTTCACGACACCGTTGCTGTTGTACGACCTCGGGTTGCTT------------------------GCCGGGGCAGACCGT---AACACA------------------------------------ATCGCATCG---CTCGTCGGCCTCGACGTGCTGATGATCGGCACCGGTCTGGTCGCGACG---------CTG------------------------------------------------------------------------------AGC---GCGGGA---------AGCGGCGTGCTGTCTGCCGGC---------GCGGAACGG------------------CTGATCTGG---TGGGGCATCAGTACCGCCTTCCTGCTGGTCCTGCTGTACTTCCTG---------------TTC------AGC---TCGCTGTCCGGCCGGGTCGCAAACCTA---------------CCAAGCGATACG---CGT---AGC---ACG---TTC---AAG---ACGTTG---CGCAACCTCGTGACCGTC---------------------------------------------------------------GTCTGG---------CTGGTCTACCCAGTCTGGTGGCTTATTGGTACCGAGGGC---GTCGGC---------------CTCGTCGGTATCGGGATCGAGACGGCCGGCTTCATGGTCCTCGAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DW--------LFTTPLLLYDLGLL--------AGADR-NT------------IAS-LVGLDVLMIGTGLVAT---L--------------------------S-AG---SGVLSAG---AER------LIW-WGISTAFLLVLLYFL-----F--S-SLSGRVANL-----PSDT-R-S-T-F-K-TL-RNLVTV---------------------VW---LVYPVWWLIGTEG-VG-----LVGIGIETAGFMVLD------------------------------------------------------------------ [bacteriorhodopsin]_NC_006396 [bacteriorhodopsin] 55376942_2793474_2794226_Haloarcula_marismortui_ATCC_43049_bacteriorhodopsin_complete_cds gi|55376942|gb|NC_006396| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Haloarcula marismortui ATCC 43049 chromosome I, complete sequence NC_006396 [[other rhodopsin/bacteriorhodopsin-like 2]] other rhodopsin bacteriorhodopsin-like 2 bacteriorhodopsin proton pump D97 ; D108 light-energy conversion (ion transport) Green (L105) [Archaea/Euryarchaeota/Halobacteria/Halobacteriales/Halobacteriaceae/Haloarcula] taxon:272569 genomic_DNA strain 10-juin-13 #na #na Dead Sea marine 31.56 35.48 #na #na #na #na #na ATGCCAGCACCAGGGAGCGAAGGAATTTGGCTGTGGTTAGGTACAGCGGGCATGTTCCTCGGCATGCTATACTTCATCGCGCGCGGCTGGGGCGAAACTGACGGCCGGCGTCAGAAGTTCTACATCGCGACAATACTGATCACGGCAATCGCGTTCGTGAATTACCTCGCGATGGCGCTTGGCTTCGGCCTGACGTTCATCGAGTTCGGCGGCGAACAACACCCCATCTACTGGGCGCGATACACCGACTGGCTGTTCACAACGCCGTTGCTGCTGTATGACCTCGGACTGCTTGCAGGTGCAGACCGCAACACCATTTACTCGCTCGTCAGCCTCGACGTGCTGATGATCGGTACTGGTGTGGTCGCAACGCTGAGTGCAGGCAGTGGCGTGCTGTCTGCCGGTGCAGAACGGCTGGTCTGGTGGGGTATCAGCACTGCCTTCCTGCTGGTCCTGCTGTACTTCCTGTTCAGTTCGCTGTCTGGCCGGGTTGCAAACCTGCCCAGTGACACGCGAAGCACGTTCAAGACGTTGCGCAACCTCGTCACTGTCGTCTGGCTGGTCTACCCAGTCTGGTGGCTCGTCGGCAGTGAGGGGCTTGGCCTCGTCGGTATCGGAATCGAGACGGCCGGCTTCATGGTCATCGACCTCGTCGCGAAGGTCGGCTTCGGTATCATCCTGCTCCGGAGCCACGGCGTGCTCGACGGCGCGGCCGAGACGACCGGAACTGGCGCAACGCCTGCAGACGAC MPAPGSEGIWLWLGTAGMFLGMLYFIARGWGETDGRRQKFYIATILITAIAFVNYLAMALGFGLTFIEFGGEQHPIYWARYTDWLFTTPLLLYDLGLLAGADRNTIYSLVSLDVLMIGTGVVATLSAGSGVLSAGAERLVWWGISTAFLLVLLYFLFSSLSGRVANLPSDTRSTFKTLRNLVTVVWLVYPVWWLVGSEGLGLVGIGIETAGFMVIDLVAKVGFGIILLRSHGVLDGAAETTGTGATPADD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCCAGCACCAGGGAGCGAAGGAATTTGGCTGTGGTTAGGTACAGCGGGCATGTTCCTCGGCATGCTATACTTCATCGCGCGCGGCTGGGGCGAAACTGACGGCCGGCGTCAGAAGTTCTACATCGCGACAATACTGATCACGGCAATCGCGTTCGTGAATTACCTCGCGATGGCGCTTGGCTTCGGC------------------------------CTGACGTTCATCGAGTTCGGCGGCGAACAACACCCCATCTACTGGGCGCGATACACCGACTGG------------------------CTGTTCACAACGCCGTTGCTGCTGTATGACCTCGGACTGCTT------------------------GCAGGTGCAGACCGC---AACACC------------------------------------ATTTACTCG---CTCGTCAGCCTCGACGTGCTGATGATCGGTACTGGTGTGGTCGCAACG---------CTG------------------------------------------------------------------------------AGT---GCAGGC---------AGTGGCGTGCTGTCTGCCGGT---------GCAGAACGG------------------CTGGTCTGG---TGGGGTATCAGCACTGCCTTCCTGCTGGTCCTGCTGTACTTCCTG---------------TTC------AGT---TCGCTGTCTGGCCGGGTTGCAAACCTG---------------CCCAGTGACACG---CGA---AGC---ACG---TTC---AAG---ACGTTG---CGCAACCTCGTCACTGTC---------------------------------------------------------------GTCTGG---------CTGGTCTACCCAGTCTGGTGGCTCGTCGGCAGTGAGGGG---CTTGGC---------------CTCGTCGGTATCGGAATCGAGACGGCCGGCTTCATGGTCATCGACCTCGTCGCGAAGGTCGGCTTCGGTATCATCCTGCTCCGGAGCCACGGCGTGCTCGACGGCGCGGCCGAGACGACCGGAACTGGCGCAACGCCTGCAGACGAC------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------MPAPGSEGIWLWLGTAGMFLGMLYFIARGWGETDGRRQKFYIATILITAIAFVNYLAMALGFG----------LTFIEFGGEQHPIYWARYTDW--------LFTTPLLLYDLGLL--------AGADR-NT------------IYS-LVSLDVLMIGTGVVAT---L--------------------------S-AG---SGVLSAG---AER------LVW-WGISTAFLLVLLYFL-----F--S-SLSGRVANL-----PSDT-R-S-T-F-K-TL-RNLVTV---------------------VW---LVYPVWWLVGSEG-LG-----LVGIGIETAGFMVIDLVAKVGFGIILLRSHGVLDGAAETTGTGATPADD-------------------------------- [bacteriorhodopsin]_HM475128 [bacteriorhodopsin] clone_bR-h02_HM475128 gi|299772657|gb|HM475128| Uncultured bacterium clone bR-h02 bacteriorhodopsin (bop) gene, partial cds. Uncultured bacterium clone bR-h02 bacteriorhodopsin (bop) gene, partial cds. HM475128 [[other rhodopsin/bacteriorhodopsin-like 2]] other rhodopsin bacteriorhodopsin-like 2 bacteriorhodopsin proton pump D97 ; D108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 03-juil-10 #na saltern soil other terrestrial 23.1 120.1 One partial bacteriorhodopsin sequence of genomic DNA from saltern soil Lin,S.-J., Liao,H.-C. and Chu,W.-S. Unpublished #na #na GACTGGCTGTTCACCACGCCACTGTTGCTGTACGACCTCGGCTTGCTCGCCGGGGCGGACCGCAACACGATCGCGACGCTGGTCAGTCTCGACGTCCTGATGATCGGGACCGGTCTGGTGGCGACGCTGAGTGCCGGGAGCGGTGTTCTCTCGGCCGGCGCAGAGCGACTGATCTGGTGGGGTATCAGCACTGCGTTCCTGCTGGTGCTCCTGTACTTCCTGTTCAGTTCGCTGACGGCGCGGGTCAGCGACTTGCCGGCTGACACACAGAGCACGTTCACCACGTTGCGGAATCTGGTGGCCGTGGTCTGGCTGATATACCCGGTCTGGTGGCTCATCGGGACCGAGGGTATCGGCCTGGTCGGCATCGGCATCGAGACGGCCGGATTCATGGTGCTCGACCT DWLFTTPLLLYDLGLLAGADRNTIATLVSLDVLMIGTGLVATLSAGSGVLSAGAERLIWWGISTAFLLVLLYFLFSSLTARVSDLPADTQSTFTTLRNLVAVVWLIYPVWWLIGTEGIGLVGIGIETAGFMVLD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTGG------------------------CTGTTCACCACGCCACTGTTGCTGTACGACCTCGGCTTGCTC------------------------GCCGGGGCGGACCGC---AACACG------------------------------------ATCGCGACG---CTGGTCAGTCTCGACGTCCTGATGATCGGGACCGGTCTGGTGGCGACG---------CTG------------------------------------------------------------------------------AGT---GCCGGG---------AGCGGTGTTCTCTCGGCCGGC---------GCAGAGCGA------------------CTGATCTGG---TGGGGTATCAGCACTGCGTTCCTGCTGGTGCTCCTGTACTTCCTG---------------TTC------AGT---TCGCTGACGGCGCGGGTCAGCGACTTG---------------CCGGCTGACACA---CAG---AGC---ACG---TTC---ACC---ACGTTG---CGGAATCTGGTGGCCGTG---------------------------------------------------------------GTCTGG---------CTGATATACCCGGTCTGGTGGCTCATCGGGACCGAGGGT---ATCGGC---------------CTGGTCGGCATCGGCATCGAGACGGCCGGATTCATGGTGCTCGAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DW--------LFTTPLLLYDLGLL--------AGADR-NT------------IAT-LVSLDVLMIGTGLVAT---L--------------------------S-AG---SGVLSAG---AER------LIW-WGISTAFLLVLLYFL-----F--S-SLTARVSDL-----PADT-Q-S-T-F-T-TL-RNLVAV---------------------VW---LIYPVWWLIGTEG-IG-----LVGIGIETAGFMVLD------------------------------------------------------------------ [bacteriorhodopsin]_HM475115 [bacteriorhodopsin] clone_bR-c11_HM475115 gi|299772631|gb|HM475115| Uncultured bacterium clone bR-c11 bacteriorhodopsin (bop) gene, partial cds. Uncultured bacterium clone bR-c11 bacteriorhodopsin (bop) gene, partial cds. HM475115 [[other rhodopsin/bacteriorhodopsin-like 2]] other rhodopsin bacteriorhodopsin-like 2 bacteriorhodopsin proton pump D97 ; D108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 03-juil-10 #na saltern soil other terrestrial 23.1 120.1 One partial bacteriorhodopsin sequence of genomic DNA from saltern soil Lin,S.-J., Liao,H.-C. and Chu,W.-S. Unpublished #na #na GACTGGTTGTTCACCACGCCGTTACTGCTGTACGATCTCGCTTTACTGGCGGGGGCTGATCGGAACACGATCTACTCGCTGGTCGGTCTCGACGTGCTGATGATCGGCACGGGCGGGCTCGCGACGCTGTCGGCCGGTTCCGGCGTCCTGTCGGCGGGAGCCGAACGACTCGTCTGGTGGGGCATTAGCACCGGCTTCCTGCTGGTGTTGCTGTACTTCCTGTTCAGCAAGCTCACCGCCCGGGCCAGCGAACTGTCGGGCGACGTCCAGTCGAAGTTCTCGACGTTGCGCAACATGATCCTGGTCCTGTGGCTGGTGTATCCGGTCCTGTGGCTGGTCGGGACCGAAGGGCTCGGCCTGGTCGGTCTCGGCGCCGAGACGGCTGCGTTCATGGTGCTCGACCT DWLFTTPLLLYDLALLAGADRNTIYSLVGLDVLMIGTGGLATLSAGSGVLSAGAERLVWWGISTGFLLVLLYFLFSKLTARASELSGDVQSKFSTLRNMILVLWLVYPVLWLVGTEGLGLVGLGAETAAFMVLD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTGG------------------------TTGTTCACCACGCCGTTACTGCTGTACGATCTCGCTTTACTG------------------------GCGGGGGCTGATCGG---AACACG------------------------------------ATCTACTCG---CTGGTCGGTCTCGACGTGCTGATGATCGGCACGGGCGGGCTCGCGACG---------CTG------------------------------------------------------------------------------TCG---GCCGGT---------TCCGGCGTCCTGTCGGCGGGA---------GCCGAACGA------------------CTCGTCTGG---TGGGGCATTAGCACCGGCTTCCTGCTGGTGTTGCTGTACTTCCTG---------------TTC------AGC---AAGCTCACCGCCCGGGCCAGCGAACTG---------------TCGGGCGACGTC---CAG---TCG---AAG---TTC---TCG---ACGTTG---CGCAACATGATCCTGGTC---------------------------------------------------------------CTGTGG---------CTGGTGTATCCGGTCCTGTGGCTGGTCGGGACCGAAGGG---CTCGGC---------------CTGGTCGGTCTCGGCGCCGAGACGGCTGCGTTCATGGTGCTCGAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DW--------LFTTPLLLYDLALL--------AGADR-NT------------IYS-LVGLDVLMIGTGGLAT---L--------------------------S-AG---SGVLSAG---AER------LVW-WGISTGFLLVLLYFL-----F--S-KLTARASEL-----SGDV-Q-S-K-F-S-TL-RNMILV---------------------LW---LVYPVLWLVGTEG-LG-----LVGLGAETAAFMVLD------------------------------------------------------------------ [bacteriorhodopsin]_HM475129 [bacteriorhodopsin] clone_bR-h08_HM475129 gi|299772659|gb|HM475129| Uncultured bacterium clone bR-h08 bacteriorhodopsin (bop) gene, partial cds. Uncultured bacterium clone bR-h08 bacteriorhodopsin (bop) gene, partial cds. HM475129 [[other rhodopsin/bacteriorhodopsin-like 2]] other rhodopsin bacteriorhodopsin-like 2 bacteriorhodopsin proton pump D97 ; D108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 03-juil-10 #na saltern soil other terrestrial 23.1 120.1 One partial bacteriorhodopsin sequence of genomic DNA from saltern soil Lin,S.-J., Liao,H.-C. and Chu,W.-S. Unpublished #na #na GACTGGTTGTTCACCACGCCGTTGCTGTTGTACGACCTCGCGTTGCTCGCGGGCGCGGACCGGAACACGATCAACTCACTGGTCGGACTGGACGTGCTGATGATCGGCACGGGTGCGCTGGCGACCCTCTCGGCCGGCTCCGGTGTGCTGACTGCCGGAACCGAACGGCTGCTGTGGTGGGGTATCAGCACCGGTTTCCTGCTGGTGTTGCTGTACTTCCTGTTCAGCAAACTCACCGCACGTGCGTCGGAACTCTCCAGCGACACGAGATCGACGTTCTCGACGTTACGGAACCTGATTCTCGTGTTGTGGCTGGTGTATCCAGTCTGGTGGCTCATCGGTTCCGAAGGGCTCAACCTTGTCGGGATCGTTCCCGAAACAGCCGGCTTCATGGTCCTTGACGT DWLFTTPLLLYDLALLAGADRNTINSLVGLDVLMIGTGALATLSAGSGVLTAGTERLLWWGISTGFLLVLLYFLFSKLTARASELSSDTRSTFSTLRNLILVLWLVYPVWWLIGSEGLNLVGIVPETAGFMVLD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTGG------------------------TTGTTCACCACGCCGTTGCTGTTGTACGACCTCGCGTTGCTC------------------------GCGGGCGCGGACCGG---AACACG------------------------------------ATCAACTCA---CTGGTCGGACTGGACGTGCTGATGATCGGCACGGGTGCGCTGGCGACC---------CTC------------------------------------------------------------------------------TCG---GCCGGC---------TCCGGTGTGCTGACTGCCGGA---------ACCGAACGG------------------CTGCTGTGG---TGGGGTATCAGCACCGGTTTCCTGCTGGTGTTGCTGTACTTCCTG---------------TTC------AGC---AAACTCACCGCACGTGCGTCGGAACTC---------------TCCAGCGACACG---AGA---TCG---ACG---TTC---TCG---ACGTTA---CGGAACCTGATTCTCGTG---------------------------------------------------------------TTGTGG---------CTGGTGTATCCAGTCTGGTGGCTCATCGGTTCCGAAGGG---CTCAAC---------------CTTGTCGGGATCGTTCCCGAAACAGCCGGCTTCATGGTCCTTGAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DW--------LFTTPLLLYDLALL--------AGADR-NT------------INS-LVGLDVLMIGTGALAT---L--------------------------S-AG---SGVLTAG---TER------LLW-WGISTGFLLVLLYFL-----F--S-KLTARASEL-----SSDT-R-S-T-F-S-TL-RNLILV---------------------LW---LVYPVWWLIGSEG-LN-----LVGIVPETAGFMVLD------------------------------------------------------------------ [bacteriorhodopsin]_HM475111 [bacteriorhodopsin] clone_bR-a05_HM475111 gi|299772623|gb|HM475111| Uncultured bacterium clone bR-a05 bacteriorhodopsin (bop) gene, partial cds. Uncultured bacterium clone bR-a05 bacteriorhodopsin (bop) gene, partial cds. HM475111 [[other rhodopsin/bacteriorhodopsin-like 2]] other rhodopsin bacteriorhodopsin-like 2 bacteriorhodopsin proton pump D97 ; D108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 03-juil-10 #na saltern soil other terrestrial 23.1 120.1 One partial bacteriorhodopsin sequence of genomic DNA from saltern soil Lin,S.-J., Liao,H.-C. and Chu,W.-S. Unpublished #na #na GACTGGCTGTTCACGACACCGCTGTTGCTCATCGACCTCGGGTTGCTGGCGGGCGCAAGCCGCAACCAGATTACGACACTCGTCGGTCTCGACGTGCTGATGATCGGGACCGGCGCTATCGCGACGTTGACCAGCGACGGCGTCCTGCTCGGTGCGGCCGGTGACCGCCTCATCTGGTGGGGCGTCTCCACGGGCCTCCTGCTCGTGCTGCTGTACTTCCTGTTCGGCACCCTCACCCAGGAGGCCGAACGGCTTTCACCGGACGCCCAGTCGACGTTCAAAACACTACGGAACCTCGTCCTCGTGGCCTGGTTAATCTACCCGGTCTGGTGGGTGATTGGCACCGAGGGCGTCGGCGCCATCAGCCTCTACATCGAGACGGCCGGCTTCATGGTGATTGACGT DWLFTTPLLLIDLGLLAGASRNQITTLVGLDVLMIGTGAIATLTSDGVLLGAAGDRLIWWGVSTGLLLVLLYFLFGTLTQEAERLSPDAQSTFKTLRNLVLVAWLIYPVWWVIGTEGVGAISLYIETAGFMVID ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTGG------------------------CTGTTCACGACACCGCTGTTGCTCATCGACCTCGGGTTGCTG------------------------GCGGGCGCAAGCCGC---AACCAG------------------------------------ATTACGACA---CTCGTCGGTCTCGACGTGCTGATGATCGGGACCGGCGCTATCGCGACG---------TTG------------------------------------------------------------------------------ACC---AGCGAC---------GGCGTCCTGCTCGGTGCGGCC---------GGTGACCGC------------------CTCATCTGG---TGGGGCGTCTCCACGGGCCTCCTGCTCGTGCTGCTGTACTTCCTG---------------TTC------GGC---ACCCTCACCCAGGAGGCCGAACGGCTT---------------TCACCGGACGCC---CAG---TCG---ACG---TTC---AAA---ACACTA---CGGAACCTCGTCCTCGTG---------------------------------------------------------------GCCTGG---------TTAATCTACCCGGTCTGGTGGGTGATTGGCACCGAGGGC---GTCGGC---------------GCCATCAGCCTCTACATCGAGACGGCCGGCTTCATGGTGATTGAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DW--------LFTTPLLLIDLGLL--------AGASR-NQ------------ITT-LVGLDVLMIGTGAIAT---L--------------------------T-SD---GVLLGAA---GDR------LIW-WGVSTGLLLVLLYFL-----F--G-TLTQEAERL-----SPDA-Q-S-T-F-K-TL-RNLVLV---------------------AW---LIYPVWWVIGTEG-VG-----AISLYIETAGFMVID------------------------------------------------------------------ [bacteriorhodopsin]_HM475126 [bacteriorhodopsin] clone_bR-g06_HM475126 gi|299772653|gb|HM475126| Uncultured bacterium clone bR-g06 bacteriorhodopsin (bop) gene, partial cds. Uncultured bacterium clone bR-g06 bacteriorhodopsin (bop) gene, partial cds. HM475126 [[other rhodopsin/bacteriorhodopsin-like 2]] other rhodopsin bacteriorhodopsin-like 2 bacteriorhodopsin proton pump D97 ; D108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 03-juil-10 #na saltern soil other terrestrial 23.1 120.1 One partial bacteriorhodopsin sequence of genomic DNA from saltern soil Lin,S.-J., Liao,H.-C. and Chu,W.-S. Unpublished #na #na GACTGGTTGTTCACCACGCCGCTGTTGCTCATCGACCTCGGGTTACTGGCGGGTGCAAGCCGCAACCAGATTTCGACGCTCGTCGGCCTCGACGTGCTGATGATCGGGACCGGCGCTATCGCGACGCTGACCAGCAACGGCGTCCTGCTCGGTGCAGCCGGTGACCGCCTCATCTGGTGGGGCGTCTCCACGGGCTTCCTGCTCGTGTTGCTGTACTTCCTGTTCGGCACCCTCACACGGGAGGCCAAACGGCTCTCGCCGGACGCCCAGTCGACCTTCAAGACGCTGCGGAACCTCATCCTCGTGGCGTGGCTGATCTACCCAGCATGGTGGCTGATCGGCACCGAAGGCCTCAGCGTTATCAGCCTCAACGTCGAGACGGCCGGCTTCATGGTGCTCGACCT DWLFTTPLLLIDLGLLAGASRNQISTLVGLDVLMIGTGAIATLTSNGVLLGAAGDRLIWWGVSTGFLLVLLYFLFGTLTREAKRLSPDAQSTFKTLRNLILVAWLIYPAWWLIGTEGLSVISLNVETAGFMVLD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTGG------------------------TTGTTCACCACGCCGCTGTTGCTCATCGACCTCGGGTTACTG------------------------GCGGGTGCAAGCCGC---AACCAG------------------------------------ATTTCGACG---CTCGTCGGCCTCGACGTGCTGATGATCGGGACCGGCGCTATCGCGACG---------CTG------------------------------------------------------------------------------ACC---AGCAAC---------GGCGTCCTGCTCGGTGCAGCC---------GGTGACCGC------------------CTCATCTGG---TGGGGCGTCTCCACGGGCTTCCTGCTCGTGTTGCTGTACTTCCTG---------------TTC------GGC---ACCCTCACACGGGAGGCCAAACGGCTC---------------TCGCCGGACGCC---CAG---TCG---ACC---TTC---AAG---ACGCTG---CGGAACCTCATCCTCGTG---------------------------------------------------------------GCGTGG---------CTGATCTACCCAGCATGGTGGCTGATCGGCACCGAAGGC---CTCAGC---------------GTTATCAGCCTCAACGTCGAGACGGCCGGCTTCATGGTGCTCGAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DW--------LFTTPLLLIDLGLL--------AGASR-NQ------------IST-LVGLDVLMIGTGAIAT---L--------------------------T-SN---GVLLGAA---GDR------LIW-WGVSTGFLLVLLYFL-----F--G-TLTREAKRL-----SPDA-Q-S-T-F-K-TL-RNLILV---------------------AW---LIYPAWWLIGTEG-LS-----VISLNVETAGFMVLD------------------------------------------------------------------ [bacteriorhodopsin]_HM475109 [bacteriorhodopsin] clone_bR-a01_HM475109 gi|299772619|gb|HM475109| Uncultured bacterium clone bR-a01 bacteriorhodopsin (bop) gene, partial cds. Uncultured bacterium clone bR-a01 bacteriorhodopsin (bop) gene, partial cds. HM475109 [[other rhodopsin/bacteriorhodopsin-like 2]] other rhodopsin bacteriorhodopsin-like 2 bacteriorhodopsin proton pump D97 ; D108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 03-juil-10 #na saltern soil other terrestrial 23.1 120.1 One partial bacteriorhodopsin sequence of genomic DNA from saltern soil Lin,S.-J., Liao,H.-C. and Chu,W.-S. Unpublished #na #na GACTGGCTGTTCACCACGCCACTCTTACTTATTGACCTCGGACTGCTTGCCGGGGCAAACCGAAACCAACTGTCTACACTCGTCGGCCTTGACGTGCTGATGATCGGCACCGGTGCCGTGGCAACGCTATCGACAGCCGGTGTGCTGCTCAGCCCTGTCGGGGATCGCATTATTTGGTGGGGAGTCTCGACGGGCTTCTTATTGGTGTTGCTATACTTCCTTTTCGGCACTCTAACCAAAGAAGCAAACGAGCTGTCGGGAGCCGCGCAATCAACGTTTAGTACTCTTCGGAACCTCATCGTAGTCGTCTGGTTGGTCTACCCGGTATGGTGGATCCTCGGCACGGAGGGGCTCGGAATGATCAGCCTCTATAGCGAAACGGCCGGATTCATGGTGCTCGACCT DWLFTTPLLLIDLGLLAGANRNQLSTLVGLDVLMIGTGAVATLSTAGVLLSPVGDRIIWWGVSTGFLLVLLYFLFGTLTKEANELSGAAQSTFSTLRNLIVVVWLVYPVWWILGTEGLGMISLYSETAGFMVLD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTGG------------------------CTGTTCACCACGCCACTCTTACTTATTGACCTCGGACTGCTT------------------------GCCGGGGCAAACCGA---AACCAA------------------------------------CTGTCTACA---CTCGTCGGCCTTGACGTGCTGATGATCGGCACCGGTGCCGTGGCAACG---------CTA------------------------------------------------------------------------------TCG---ACAGCC---------GGTGTGCTGCTCAGCCCTGTC---------GGGGATCGC------------------ATTATTTGG---TGGGGAGTCTCGACGGGCTTCTTATTGGTGTTGCTATACTTCCTT---------------TTC------GGC---ACTCTAACCAAAGAAGCAAACGAGCTG---------------TCGGGAGCCGCG---CAA---TCA---ACG---TTT---AGT---ACTCTT---CGGAACCTCATCGTAGTC---------------------------------------------------------------GTCTGG---------TTGGTCTACCCGGTATGGTGGATCCTCGGCACGGAGGGG---CTCGGA---------------ATGATCAGCCTCTATAGCGAAACGGCCGGATTCATGGTGCTCGAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DW--------LFTTPLLLIDLGLL--------AGANR-NQ------------LST-LVGLDVLMIGTGAVAT---L--------------------------S-TA---GVLLSPV---GDR------IIW-WGVSTGFLLVLLYFL-----F--G-TLTKEANEL-----SGAA-Q-S-T-F-S-TL-RNLIVV---------------------VW---LVYPVWWILGTEG-LG-----MISLYSETAGFMVLD------------------------------------------------------------------ [halorhodopsin]_NC_010364 [halorhodopsin] 169235049_155843_156667_Halobacterium_salinarum_R1_halorhodopsin_genome gi|169235049|gb|NC_010364| Halobacterium salinarum R1, complete genome Halobacterium salinarum R1, complete genome NC_010364 [[other rhodopsin/halorhodopsin]] other rhodopsin halorhodopsin halorhodopsin chloride pump T97 ; A108 light-energy conversion (ion transport) unknown (I105) [Archaea/Euryarchaeota/Halobacteria/Halobacteriales/Halobacteriaceae/Halobacterium] taxon:478009 genomic_DNA strain 10-juin-13 #na #na #na #na #na #na #na #na #na #na ATGTCAATCACGAGTGTACCCGGTGTGGTCGATGCGGGGGTGCTGGGCGCGCAATCGGCGGCCGCGGTCCGCGAGAACGCGCTGTTGAGTTCGTCGCTGTGGGTGAACGTCGCGCTCGCGGGGATCGCGATCCTCGTGTTCGTGTATATGGGACGCACCATCAGACCGGGACGACCGCGGCTCATCTGGGGGGCGACGCTGATGATCCCGCTGGTGTCGATCTCCAGCTACCTCGGGCTGCTGTCGGGGCTCACCGTGGGGATGATCGAGATGCCCGCCGGGCACGCGCTGGCCGGCGAGATGGTGCGCAGTCAGTGGGGGCGGTATCTCACGTGGGCGCTGTCGACGCCGATGATACTGCTGGCGCTGGGGCTGCTGGCGGACGTCGATCTCGGCAGTCTGTTTACCGTGATCGCGGCCGACATCGGGATGTGCGTGACGGGGTTGGCGGCGGCGATGACCACGTCGGCGCTGCTCTTCCGGTGGGCGTTTTACGCGATCAGTTGCGCGTTCTTCGTGGTGGTGTTGTCCGCCCTAGTGACCGACTGGGCGGCGTCGGCGTCGAGCGCCGGCACCGCGGAGATCTTCGACACGCTGCGCGTGCTCACGGTGGTGCTCTGGCTCGGATACCCCATCGTGTGGGCGGTCGGCGTGGAGGGGCTGGCGCTCGTGCAGTCCGTGGGAGTCACGTCCTGGGCGTACTCGGTGCTTGACGTCTTCGCGAAGTACGTCTTCGCGTTCATCCTGTTGCGGTGGGTGGCGAACAACGAGCGGACCGTGGCGGTCGCCGGCCAGACGCTTGGCACCATGTCAAGCGACGAC MSITSVPGVVDAGVLGAQSAAAVRENALLSSSLWVNVALAGIAILVFVYMGRTIRPGRPRLIWGATLMIPLVSISSYLGLLSGLTVGMIEMPAGHALAGEMVRSQWGRYLTWALSTPMILLALGLLADVDLGSLFTVIAADIGMCVTGLAAAMTTSALLFRWAFYAISCAFFVVVLSALVTDWAASASSAGTAEIFDTLRVLTVVLWLGYPIVWAVGVEGLALVQSVGVTSWAYSVLDVFAKYVFAFILLRWVANNERTVAVAGQTLGTMSSDD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTCAATCACGAGTGTACCCGGTGTGGTCGATGCGGGGGTGCTGGGCGCGCAATCGGCGGCCGCGGTCCGCGAGAACGCGCTGTTGAGTTCGTCGCTGTGGGTGAACGTCGCGCTCGCGGGGATCGCGATCCTCGTGTTCGTGTATATGGGACGCACCATCAGACCGGGACGACCGCGGCTCATCTGGGGGGCGACGCTGATGATCCCGCTGGTGTCGATCTCCAGCTACCTCGGGCTGCTGTCGGGGCTCACC------------GTGGGGATGATCGAGATGCCCGCCGGGCACGCGCTGGCCGGCGAGATGGTGCGCAGTCAGTGGGGGCGGTATCTCACGTGG------------------------GCGCTGTCGACGCCGATGATACTGCTGGCGCTGGGGCTGCTG------------------------GCGGACGTCGATCTC---GGCAGT------------------------------------CTGTTTACC---GTGATCGCGGCCGACATCGGGATGTGCGTGACGGGGTTGGCGGCGGCG---------ATG---------------------------------------------------------------------------ACCACG---TCGGCG---------CTG---------------------------CTCTTCCGG------------------TGGGCGTTT---TACGCGATCAGTTGCGCGTTCTTCGTGGTGGTGTTGTCCGCCCTA---------------GTG------ACC---GACTGGGCGGCGTCGGCGTCGAGCGCC---------------------GGCACC---GCG---GAG---ATC---TTC---GAC---ACGCTG---CGCGTGCTCACGGTGGTG---------------------------------------------------------------CTCTGG---------CTCGGATACCCCATCGTGTGGGCGGTCGGCGTGGAGGGG---CTGGCG---------CTC---GTGCAGTCCGTGGGAGTCACGTCCTGGGCGTACTCGGTGCTTGACGTCTTCGCGAAGTACGTCTTCGCGTTCATCCTGTTGCGGTGGGTGGCGAACAACGAGCGGACCGTG---------GCGGTCGCCGGCCAGACGCTTGGCACC------------------ATGTCAAGCGACGAC--------------------------------------------------------------- -------------------------------------------------------------------------------------------------MSITSVPGVVDAGVLGAQSAAAVRENALLSSSLWVNVALAGIAILVFVYMGRTIRPGRPRLIWGATLMIPLVSISSYLGLLSGLT----VGMIEMPAGHALAGEMVRSQWGRYLTW--------ALSTPMILLALGLL--------ADVDL-GS------------LFT-VIAADIGMCVTGLAAA---M-------------------------TT-SA---L---------LFR------WAF-YAISCAFFVVVLSAL-----V--T-DWAASASSA-------GT-A-E-I-F-D-TL-RVLTVV---------------------LW---LGYPIVWAVGVEG-LA---L-VQSVGVTSWAYSVLDVFAKYVFAFILLRWVANNERTV---AVAGQTLGT------MSSDD--------------------- [halorhodopsin]_CP001688 [halorhodopsin] Halomicrobium_mukohataei_DSM_12286_genome_halorhodopsin_CP001688 gi|257168392|gb|CP001688| Halomicrobium mukohataei DSM 12286, complete genome Halomicrobium mukohataei DSM 12286, complete genome CP001688 [[other rhodopsin/halorhodopsin]] other rhodopsin halorhodopsin halorhodopsin chloride pump T97 ; A108 light-energy conversion (ion transport) unknown (I105) [Archaea/Euryarchaeota/Halobacteria/Halobacteriales/Halobacteriaceae/Halomicrobium] taxon:485914 genomic_DNA strain 24DEC2013 #na #na other marine -22.663 -66.236 Complete genome sequence of Halomicrobium mukohataei type strain (arg2) Tindall,B.J., Schneider,S., Lapidus,A., Copeland,A., Glavina Del Rio,T., Nolan,M., Lucas,S., Chen,F., Tice,H., Cheng,J.F., Saunders,E., Bruce,D., Goodwin,L., Pitluck,S., Mikhailova,N., Pati,A., Ivanova,N., Mavrommatis,K., Chen,A., Palaniappan,K., Chain,P., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D., Brettin,T., Han,C., Rohde,M., Goker,M., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Klenk,H.P., Kyrpides,N.C. and Detter,J.C. Stand Genomic Sci 1 (3), 270277 (2009) 21304667 type strain of Halomicrobium mukohataei ATGTCAGCAACCACCACTCTCTTGCAGGCCACACAGTCGGAGGCGGTCACGGCGATCGAGAACGACGTACTGTTGAGTTCGTCGCTGTGGGCGAACGTCGCCCTCGCCGGGCTGGCGATCCTGTTGTTCGTGTACATGGGCCGCAACGTCGAAGCGCCGCGGGCGAAGCTCATCTGGGGGGCGACGCTGATGATACCGCTGGTGTCGATCTCCAGTTACCTCGGCTTGCTCTCGGGGCTGACGGTCGGCTTCATCGAGATGCCGGCGGGGCACGCACTGGCCGGCGAGGAGGTCATGAGCCAGTGGGGCCGATACCTCACGTGGGCGCTGTCGACGCCGATGATCCTGCTGGCGCTGGGGCTCCTGGCGGATGTCGACATCGGTGACCTGTTCGTCGTGATCGCGGCCGACATCGGCATGTGCGTGACCGGGCTGGCCGCGGCGCTGATCACGTCATCGTACGGGCTCCGGTGGGCGTTTTACCTCGTCAGCTGTGCCTTCTTCCTCGTCGTGCTGTACGCCATCCTGGTCGAGTGGCCACAGAGCGCGACGGCGGCGGGCACCGACGAGATCTTCGGAACGCTGCGGGCGCTGACGGTGGTCCTGTGGCTGGGCTACCCGATCATCTGGGCCGTCGGTATCGAAGGGCTGGCGCTGGTCCAGTCGGTCGGACTCACGTCCTGGGGGTACTCGGCGCTGGACATCGGCGCGAAGTACCTGTTCGCGTTCCTGCTGTTGCGCTGGGTCGCTGCGAACCAGGACGTCGTCGGGCAGCCGAGCCTCGACACTCACTCCGAGGGGACGGCCCCGGCCGACGAC MSATTTLLQATQSEAVTAIENDVLLSSSLWANVALAGLAILLFVYMGRNVEAPRAKLIWGATLMIPLVSISSYLGLLSGLTVGFIEMPAGHALAGEEVMSQWGRYLTWALSTPMILLALGLLADVDIGDLFVVIAADIGMCVTGLAAALITSSYGLRWAFYLVSCAFFLVVLYAILVEWPQSATAAGTDEIFGTLRALTVVLWLGYPIIWAVGIEGLALVQSVGLTSWGYSALDIGAKYLFAFLLLRWVAANQDVVGQPSLDTHSEGTAPADD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTCAGCAACCACCACT------CTCTTGCAGGCC------ACACAGTCGGAGGCGGTCACGGCGATCGAGAACGACGTACTGTTGAGTTCGTCGCTGTGGGCGAACGTCGCCCTCGCCGGGCTGGCGATCCTGTTGTTCGTGTACATGGGCCGCAACGTCGAAGCGCCGCGGGCGAAGCTCATCTGGGGGGCGACGCTGATGATACCGCTGGTGTCGATCTCCAGTTACCTCGGCTTGCTCTCGGGGCTGACG------------GTCGGCTTCATCGAGATGCCGGCGGGGCACGCACTGGCCGGCGAGGAGGTCATGAGCCAGTGGGGCCGATACCTCACGTGG------------------------GCGCTGTCGACGCCGATGATCCTGCTGGCGCTGGGGCTCCTG------------------------GCGGATGTCGACATC---GGTGAC------------------------------------CTGTTCGTC---GTGATCGCGGCCGACATCGGCATGTGCGTGACCGGGCTGGCCGCGGCG---------CTG---------------------------------------------------------------------------ATCACG---TCATCG---------TAC---------------------------GGGCTCCGG------------------TGGGCGTTT---TACCTCGTCAGCTGTGCCTTCTTCCTCGTCGTGCTGTACGCCATC---------------CTG------GTC---GAGTGGCCACAGAGCGCGACGGCGGCG---------------------GGCACC---GAC---GAG---ATC---TTC---GGA---ACGCTG---CGGGCGCTGACGGTGGTC---------------------------------------------------------------CTGTGG---------CTGGGCTACCCGATCATCTGGGCCGTCGGTATCGAAGGG---CTGGCG---------CTG---GTCCAGTCGGTCGGACTCACGTCCTGGGGGTACTCGGCGCTGGACATCGGCGCGAAGTACCTGTTCGCGTTCCTGCTGTTGCGCTGGGTCGCTGCGAACCAGGACGTCGTCGGGCAGCCGAGCCTCGACACTCACTCCGAGGGGACG------------------GCCCCGGCCGACGAC--------------------------------------------------------------- -------------------------------------------------------------------------------------------------MSATTT--LLQA--TQSEAVTAIENDVLLSSSLWANVALAGLAILLFVYMGRNVEAPRAKLIWGATLMIPLVSISSYLGLLSGLT----VGFIEMPAGHALAGEEVMSQWGRYLTW--------ALSTPMILLALGLL--------ADVDI-GD------------LFV-VIAADIGMCVTGLAAA---L-------------------------IT-SS---Y---------GLR------WAF-YLVSCAFFLVVLYAI-----L--V-EWPQSATAA-------GT-D-E-I-F-G-TL-RALTVV---------------------LW---LGYPIIWAVGIEG-LA---L-VQSVGLTSWGYSALDIGAKYLFAFLLLRWVAANQDVVGQPSLDTHSEGT------APADD--------------------- [halorhodopsin]_X70292 [halorhodopsin] Halobacterium_sp_SG1_X70292 gi|43648|gb|X70292| Halobacterium spec. (SG1) gene for halo-opsin. Halobacterium spec. (SG1) gene for halo-opsin. X70292 [[other rhodopsin/halorhodopsin]] other rhodopsin halorhodopsin halorhodopsin chloride pump T97 ; A108 light-energy conversion (ion transport) unknown (I105) [Archaea/Euryarchaeota/Halobacteria/Halobacteriales/Halobacteriaceae/Halobacterium] taxon:33006 genomic DNA strain 18-APR-2005 #na #na other marine 28.049297 34.442934 Bacterioopsin, haloopsin, and sensory opsin I of the halobacterial isolate Halobacterium sp. strain SG1: three new members of a growing family Soppa,J., Duschl,J. and Oesterhelt,D. J. Bacteriol. 175 (9), 2720-2726 (1993) 8478333 #na CGTGATACACACCGTCGCATGATCGAAACAGCAGCGGCCGACATACTCGCAGGCGGAATGGTCCCGCTCGAAATGACCCAAACGCAGATCTTCGAGGCCGTTCAGAGCGACACGCTCCTCGCTTCGTCGCTCTGGATCAACATCGCCCTCGCGGGCCTCTCGATCCTCCTCTTCGTGTACATGGGCCGGAACGTGGAGGACCCGCGCGCGCAACTGATCTTCGTGGCCACGCTGATGGTCCCGCTGGTCTCTATCTCCAGTTACACCGGCCTCGTCTCCGGGCTCACGGTGAGCTTCCTCGAAATGCCGGCCGGCCACGCATTGGCCGGGCAGGAGGTTCTCACCCCGTGGGGCCGGTACCTCACGTGGGCGCTGTCGACGCCGATGATCCTCATCGCGGTCGGCCTGCTGGCCGGGTCGAACACCACGAAGCTGTTCACGGCCGTCGTGGCCGACATCGGGATGTGCGTCACCGGCCTCGCGGCCGCGCTGACGACGTCTTCGTACCTGCTCCGCTGGGTGTGGTACGCGATCAGCTGCGCGTTCTTCGTCGTCGTCCTCTACATCCTGCTCGCCGAGTGGGCCGAGGACGCCGAGATCGCCGGGACGGCGGACATCTTCAACACGCTGAAGGTGCTCACCGTGGTCCTCTGGCTCGGCTACCCGATCTTCTGGGCGCTCGGCGCCGAGGGGTTGGCGGTGCTTGACGTCGCGATCACCTCGTGGGCGTACAGCGGGATGGACATCGTCGCGAAGTACCTCTTCGCGTTCCTCCTGCTCCGGTGGGTCGTCAACAACGAGCGGACGGTCGCCGACGTGGCGTCCGGCCTCGGCTCGGGCTCGCGCGGCGGTGCGGCGCCCGCCGACGAC RDTHRRMIETAAADILAGGMVPLEMTQTQIFEAVQSDTLLASSLWINIALAGLSILLFVYMGRNVEDPRAQLIFVATLMVPLVSISSYTGLVSGLTVSFLEMPAGHALAGQEVLTPWGRYLTWALSTPMILIAVGLLAGSNTTKLFTAVVADIGMCVTGLAAALTTSSYLLRWVWYAISCAFFVVVLYILLAEWAEDAEIAGTADIFNTLKVLTVVLWLGYPIFWALGAEGLAVLDVAITSWAYSGMDIVAKYLFAFLLLRWVVNNERTVADVASGLGSGSRGGAAPADD ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTGATACACACCGTCGCATGATCGAAACAGCAGCGGCCGACATACTCGCAGGCGGAATGGTC------CCGCTCGAAATG------ACCCAAACGCAGATCTTCGAGGCCGTTCAGAGCGACACGCTCCTCGCTTCGTCGCTCTGGATCAACATCGCCCTCGCGGGCCTCTCGATCCTCCTCTTCGTGTACATGGGCCGGAACGTGGAGGACCCGCGCGCGCAACTGATCTTCGTGGCCACGCTGATGGTCCCGCTGGTCTCTATCTCCAGTTACACCGGCCTCGTCTCCGGGCTCACG------------GTGAGCTTCCTCGAAATGCCGGCCGGCCACGCATTGGCCGGGCAGGAGGTTCTCACCCCGTGGGGCCGGTACCTCACGTGG------------------------GCGCTGTCGACGCCGATGATCCTCATCGCGGTCGGCCTGCTG------------------------GCCGGGTCGAACACC---ACGAAG------------------------------------CTGTTCACG---GCCGTCGTGGCCGACATCGGGATGTGCGTCACCGGCCTCGCGGCCGCG---------CTG---------------------------------------------------------------------------ACGACG---TCTTCG---------TAC---------------------------CTGCTCCGC------------------TGGGTGTGG---TACGCGATCAGCTGCGCGTTCTTCGTCGTCGTCCTCTACATCCTG---------------CTC------GCC---GAGTGGGCCGAGGACGCCGAGATCGCC---------------------GGGACG---GCG---GAC---ATC---TTC---AAC---ACGCTG---AAGGTGCTCACCGTGGTC---------------------------------------------------------------CTCTGG---------CTCGGCTACCCGATCTTCTGGGCGCTCGGCGCCGAGGGG---TTGGCG---------------GTGCTTGACGTCGCGATCACCTCGTGGGCGTACAGCGGGATGGACATCGTCGCGAAGTACCTCTTCGCGTTCCTCCTGCTCCGGTGGGTCGTCAACAACGAGCGGACGGTC---------GCCGACGTGGCGTCCGGCCTCGGCTCGGGCTCGCGCGGCGGTGCGGCGCCCGCCGACGAC--------------------------------------------------------------- ----------------------------------------------------------------------------------RDTHRRMIETAAADILAGGMV--PLEM--TQTQIFEAVQSDTLLASSLWINIALAGLSILLFVYMGRNVEDPRAQLIFVATLMVPLVSISSYTGLVSGLT----VSFLEMPAGHALAGQEVLTPWGRYLTW--------ALSTPMILIAVGLL--------AGSNT-TK------------LFT-AVVADIGMCVTGLAAA---L-------------------------TT-SS---Y---------LLR------WVW-YAISCAFFVVVLYIL-----L--A-EWAEDAEIA-------GT-A-D-I-F-N-TL-KVLTVV---------------------LW---LGYPIFWALGAEG-LA-----VLDVAITSWAYSGMDIVAKYLFAFLLLRWVVNNERTV---ADVASGLGSGSRGGAAPADD--------------------- [halorhodopsin]_AB009622 [halorhodopsin] Halorubrum_sodomense_AB009622 gi|4579717|gb|AB009622| Halorubrum sodomense hop gene for halorhodopsin, complete cds. Halorubrum sodomense hop gene for halorhodopsin, complete cds. AB009622 [[other rhodopsin/halorhodopsin]] other rhodopsin halorhodopsin halorhodopsin chloride pump T97 ; A108 light-energy conversion (ion transport) unknown (I105) [Archaea/Euryarchaeota/Halobacteria/Halobacteriales/Halobacteriaceae/Halorubrum] taxon:35743 genomic DNA strain 12-MAY-2007 #na #na Dead Sea marine 31.5 35.49 Evolution of the archaeal rhodopsins: evolution rate changes by gene duplication and functional differentiation Ihara,K., Umemura,T., Katagiri,I., Kitajima-Ihara,T., Sugiyama,Y., Kimura,Y. and Mukohata,Y. J. Mol. Biol. 285 (1), 163-174 (1999) 9878396 #na AGCCGACGCGTACGACGGCGTCGCATGATGGAAACAGCAGCGGACGCGCTCGCAAGCGGTACGGTCCCGCTCGAAATGACGCAGACGCAGATCTTCGAGGCCATCCAGGGCGACACGCTCCTGGCCTCGTCGCTCTGGATCAACATCGCGCTCGCGGGCCTCTCGATACTCCTCTTCGTCTATATGGGGCGAAACCTGGAGGACCCCCGGGCCCAGCTGATCTTCGTCGCGACGCTGATGGTCCCGCTGGTGTCCATCTCCAGCTACACCGGGCTCGTCTCCGGGCTCACGGTGAGCTTCCTCGAGATGCCGGCGGGCCACGCGCTGGCCGGTCAAGAGGTTCTCACCCCGTGGGGGCGGTACCTCACGTGGGCGCTGTCGACGCCGATGATCCTCGTCGCGCTCGGCCTGCTGGCCGGGTCGAACGCCACGAAGCTGTTCACCGCCGTGACCGCCGACATCGGGATGTGCGTCACGGGGCTCGCGGCCGCGCTCACCACGTCCTCGTACCTGCTGCGCTGGGTCTGGTACGTCATCAGCTGCGCGTTCTTCGTCGTCGTCCTCTACGTCCTGCTGGCCGAGTGGGCCGAGGACGCCGAGGTCGCCGGCACCGCCGAGATATTCAACACGCTGAAGCTGCTCACCGTGGTCCTGTGGCTGGGCTACCCGATCTTCTGGGCGCTCGGCGCCGAGGGGCTCGCCGTGCTCGACGTCGCGGTCACCTCGTGGGCGTACAGCGGGATGGACATCGTCGCCAAGTACCTCTTCGCGTTCCTCCTGCTGCGCTGGGTCGTCGACAACGAGCGGACGGTCGCGGGCATGGCCGCCGGGCTCGGCGCGCCTCTCGCGCGGTGCGCGCCCGCCGACGACCG SRRVRRRRMMETAADALASGTVPLEMTQTQIFEAIQGDTLLASSLWINIALAGLSILLFVYMGRNLEDPRAQLIFVATLMVPLVSISSYTGLVSGLTVSFLEMPAGHALAGQEVLTPWGRYLTWALSTPMILVALGLLAGSNATKLFTAVTADIGMCVTGLAAALTTSSYLLRWVWYVISCAFFVVVLYVLLAEWAEDAEVAGTAEIFNTLKLLTVVLWLGYPIFWALGAEGLAVLDVAVTSWAYSGMDIVAKYLFAFLLLRWVVDNERTVAGMAAGLGAPLARCAPADD ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCCGACGCGTACGACGGCGTCGCATGATGGAAACA---GCAGCGGACGCGCTCGCAAGCGGTACGGTC------CCGCTCGAAATG------ACGCAGACGCAGATCTTCGAGGCCATCCAGGGCGACACGCTCCTGGCCTCGTCGCTCTGGATCAACATCGCGCTCGCGGGCCTCTCGATACTCCTCTTCGTCTATATGGGGCGAAACCTGGAGGACCCCCGGGCCCAGCTGATCTTCGTCGCGACGCTGATGGTCCCGCTGGTGTCCATCTCCAGCTACACCGGGCTCGTCTCCGGGCTCACG------------GTGAGCTTCCTCGAGATGCCGGCGGGCCACGCGCTGGCCGGTCAAGAGGTTCTCACCCCGTGGGGGCGGTACCTCACGTGG------------------------GCGCTGTCGACGCCGATGATCCTCGTCGCGCTCGGCCTGCTG------------------------GCCGGGTCGAACGCC---ACGAAG------------------------------------CTGTTCACC---GCCGTGACCGCCGACATCGGGATGTGCGTCACGGGGCTCGCGGCCGCG---------CTC---------------------------------------------------------------------------ACCACG---TCCTCG---------TAC---------------------------CTGCTGCGC------------------TGGGTCTGG---TACGTCATCAGCTGCGCGTTCTTCGTCGTCGTCCTCTACGTCCTG---------------CTG------GCC---GAGTGGGCCGAGGACGCCGAGGTCGCC---------------------GGCACC---GCC---GAG---ATA---TTC---AAC---ACGCTG---AAGCTGCTCACCGTGGTC---------------------------------------------------------------CTGTGG---------CTGGGCTACCCGATCTTCTGGGCGCTCGGCGCCGAGGGG---CTCGCC---------------GTGCTCGACGTCGCGGTCACCTCGTGGGCGTACAGCGGGATGGACATCGTCGCCAAGTACCTCTTCGCGTTCCTCCTGCTGCGCTGGGTCGTCGACAACGAGCGGACGGTC---------GCGGGCATGGCCGCCGGGCTCGGCGCG---CCTCTCGCGCGGTGCGCGCCCGCCGACGAC--------------------------------------------------------------- --------------------------------------------------------------------------------SRRVRRRRMMET-AADALASGTV--PLEM--TQTQIFEAIQGDTLLASSLWINIALAGLSILLFVYMGRNLEDPRAQLIFVATLMVPLVSISSYTGLVSGLT----VSFLEMPAGHALAGQEVLTPWGRYLTW--------ALSTPMILVALGLL--------AGSNA-TK------------LFT-AVTADIGMCVTGLAAA---L-------------------------TT-SS---Y---------LLR------WVW-YVISCAFFVVVLYVL-----L--A-EWAEDAEVA-------GT-A-E-I-F-N-TL-KLLTVV---------------------LW---LGYPIFWALGAEG-LA-----VLDVAVTSWAYSGMDIVAKYLFAFLLLRWVVDNERTV---AGMAAGLGA-PLARCAPADD--------------------- [halorhodopsin]_NC_007677 [halorhodopsin] 83814055_3439239_3439988_Salinibacter_ruber_DSM_13855_halorhodopsin_genome gi|83814055|gb|NC_007677| Salinibacter ruber DSM 13855 chromosome, complete genome Salinibacter ruber DSM 13855 chromosome, complete genome NC_007677 [[other rhodopsin/halorhodopsin]] other rhodopsin halorhodopsin halorhodopsin chloride pump T97 ; A108 light-energy conversion (ion transport) unknown (I105) [Bacteria/Bacteroidetes/Bacteroidetes Order II. Incertae sedis/Rhodothermaceae/Salinibacter] taxon:309807 genomic_DNA strain 22-juil-13 #na #na Other terrestrial 39.7 3 #na #na #na #na #na ATGTTTGAAGCAGTTCTGGATAACGCTGCTCTCGCCTCCTCCATCTACGTCAACATTGCGCTTGCCGGGCTCACCATCATCGTGATCGCGGTGATGTCACGGAGCATCCACGACTCCAGGGCGAAGCTGATCACGATGTCGACCCTGATGATCTCGGTGGTGTCCATCTCCAGCTACATGGGACTGGCCTCGGGCCTCACCATCGATCCCCTGGTCATGCCCGAGGGCCATCCCCTCGCCGGCCAGGAAGTCCTCTCCCTGTGGGGACGGTACCTGACCTGGGCCTTCTCGACGCCGTTCATTCTGCTGGCACTAGGCCTGCTGGCCCGCAGCACCACCGATAAGATTTTCTCGGCCATTGTCCTCGACGTGTTCATGTGCCTGACGGGCCTGGCCGCCGCGCTCACCACGAGCAGCCACGCCATGCGCTGGCTCTGGTACGCCCTCAGTACCGCGTTTTTCGTCGGGGTTCTGTACTACCTGCTCGTCGAGTGGCCCGCCGAGGCCGACGAGGCAGGGACCGCCGACATCTTCTCCACGCTGCAGTGGATGACCATCGTCTTGTGGATCGGGTACCCGGTCGTCTGGGCCCTCGGGAATGAGGGCCTCGCCCTCCTCGAAGTGGGCGCGACCTCGTGGGCCTACAGCGGGCTCGACATCTTCGCCAAGTACGCCTTCACCATCATTCTCGTGCTGTACGTCAGCGACGAGCCGGACGCGGTCGTCTCGACCTCACCGGCGACGGCG MFEAVLDNAALASSIYVNIALAGLTIIVIAVMSRSIHDSRAKLITMSTLMISVVSISSYMGLASGLTIDPLVMPEGHPLAGQEVLSLWGRYLTWAFSTPFILLALGLLARSTTDKIFSAIVLDVFMCLTGLAAALTTSSHAMRWLWYALSTAFFVGVLYYLLVEWPAEADEAGTADIFSTLQWMTIVLWIGYPVVWALGNEGLALLEVGATSWAYSGLDIFAKYAFTIILVLYVSDEPDAVVSTSPATA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTTTGAAGCAGTTCTGGATAACGCTGCTCTCGCCTCCTCCATCTACGTCAACATTGCGCTTGCCGGGCTCACCATCATCGTGATCGCGGTGATGTCACGGAGCATCCACGACTCCAGGGCGAAGCTGATCACGATGTCGACCCTGATGATCTCGGTGGTGTCCATCTCCAGCTACATGGGACTGGCCTCGGGCCTCACC------------ATCGATCCCCTGGTCATGCCCGAGGGCCATCCCCTCGCCGGCCAGGAAGTCCTCTCCCTGTGGGGACGGTACCTGACCTGG------------------------GCCTTCTCGACGCCGTTCATTCTGCTGGCACTAGGCCTGCTG------------------------GCCCGCAGCACCACC---GATAAG------------------------------------ATTTTCTCG---GCCATTGTCCTCGACGTGTTCATGTGCCTGACGGGCCTGGCCGCCGCG---------CTC---------------------------------------------------------------------------ACCACG---AGCAGC---------CAC---------------------------GCCATGCGC------------------TGGCTCTGG---TACGCCCTCAGTACCGCGTTTTTCGTCGGGGTTCTGTACTACCTG---------------CTC------GTC---GAGTGGCCCGCCGAGGCCGACGAGGCA---------------------GGGACC---GCC---GAC---ATC---TTC---TCC---ACGCTG---CAGTGGATGACCATCGTC---------------------------------------------------------------TTGTGG---------ATCGGGTACCCGGTCGTCTGGGCCCTCGGGAATGAGGGC---CTCGCC---------------CTCCTCGAAGTGGGCGCGACCTCGTGGGCCTACAGCGGGCTCGACATCTTCGCCAAGTACGCCTTCACCATCATTCTCGTGCTGTACGTCAGCGACGAGCCGGACGCGGTCGTCTCGACCTCACCGGCGACGGCG------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------MFEAVLDNAALASSIYVNIALAGLTIIVIAVMSRSIHDSRAKLITMSTLMISVVSISSYMGLASGLT----IDPLVMPEGHPLAGQEVLSLWGRYLTW--------AFSTPFILLALGLL--------ARSTT-DK------------IFS-AIVLDVFMCLTGLAAA---L-------------------------TT-SS---H---------AMR------WLW-YALSTAFFVGVLYYL-----L--V-EWPAEADEA-------GT-A-D-I-F-S-TL-QWMTIV---------------------LW---IGYPVVWALGNEG-LA-----LLEVGATSWAYSGLDIFAKYAFTIILVLYVSDEPDAVVSTSPATA------------------------------------ [bacteriorhodopsin]_NC_010364 [bacteriorhodopsin] 169235049_1082241_1083029_Halobacterium_salinarum_R1_bacteriorhodopsin_genome gi|169235049|gb|NC_010364| Halobacterium salinarum R1, complete genome Halobacterium salinarum R1, complete genome NC_010364 [[other rhodopsin/bacteriorhodopsin-like 1]] other rhodopsin bacteriorhodopsin-like 1 bacteriorhodopsin proton pump D97 ; D108 light-energy conversion (ion transport) Green (L105) [Archaea/Euryarchaeota/Halobacteria/Halobacteriales/Halobacteriaceae/Halobacterium] taxon:478009 genomic_DNA strain 10-juin-13 #na #na #na #na #na #na #na #na #na #na ATGTTGGAGTTATTGCCAACAGCAGTGGAGGGGGTATCGCAGGCCCAGATCACCGGACGTCCGGAGTGGATCTGGCTAGCGCTCGGTACGGCGCTAATGGGACTCGGGACGCTCTATTTCCTCGTGAAAGGGATGGGCGTCTCGGACCCAGATGCAAAGAAATTCTACGCCATCACGACGCTCGTCCCAGCCATCGCGTTCACGATGTACCTCTCGATGCTGCTGGGGTATGGCCTCACAATGGTACCGTTCGGTGGGGAGCAGAACCCCATCTACTGGGCGCGGTACGCTGACTGGCTGTTCACCACGCCGCTGTTGTTGTTAGACCTCGCGTTGCTCGTTGACGCGGATCAGGGAACGATCCTTGCGCTCGTCGGTGCCGACGGCATCATGATCGGGACCGGCCTGGTCGGCGCACTGACGAAGGTCTACTCGTACCGCTTCGTGTGGTGGGCGATCAGCACCGCAGCGATGCTGTACATCCTGTACGTGCTGTTCTTCGGGTTCACCTCGAAGGCCGAAAGCATGCGCCCCGAGGTCGCATCCACGTTCAAAGTACTGCGTAACGTTACCGTTGTGTTGTGGTCCGCGTATCCCGTCGTGTGGCTGATCGGCAGCGAAGGTGCGGGAATCGTGCCGCTGAACATCGAGACGCTGCTGTTCATGGTGCTTGACGTGAGCGCGAAGGTCGGCTTCGGGCTCATCCTCCTGCGCAGTCGTGCGATCTTCGGCGAAGCCGAAGCGCCGGAGCCGTCCGCCGGCGACGGCGCGGCCGCGACCAGCGAC MLELLPTAVEGVSQAQITGRPEWIWLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVPFGGEQNPIYWARYADWLFTTPLLLLDLALLVDADQGTILALVGADGIMIGTGLVGALTKVYSYRFVWWAISTAAMLYILYVLFFGFTSKAESMRPEVASTFKVLRNVTVVLWSAYPVVWLIGSEGAGIVPLNIETLLFMVLDVSAKVGFGLILLRSRAIFGEAEAPEPSAGDGAAATSD ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTTGGAGTTATTGCCAACAGCAGTGGAGGGGGTATCGCAGGCCCAGATCACCGGACGTCCGGAGTGGATCTGGCTAGCGCTCGGTACGGCGCTAATGGGACTCGGGACGCTCTATTTCCTCGTGAAAGGGATGGGCGTCTCGGACCCAGATGCAAAGAAATTCTACGCCATCACGACGCTCGTCCCAGCCATCGCGTTCACGATGTACCTCTCGATGCTGCTGGGGTATGGC------------------------------CTCACAATGGTACCGTTCGGTGGGGAGCAGAACCCCATCTACTGGGCGCGGTACGCTGACTGG------------------------CTGTTCACCACGCCGCTGTTGTTGTTAGACCTCGCGTTGCTC------------------------GTTGACGCGGATCAG---GGAACG------------------------------------ATCCTTGCG---CTCGTCGGTGCCGACGGCATCATGATCGGGACCGGCCTGGTCGGCGCA---------CTG------------------------------------------------------------------------------ACG---AAGGTC---------TAC---------------------------TCGTACCGC------------------TTCGTGTGG---TGGGCGATCAGCACCGCAGCGATGCTGTACATCCTGTACGTGCTG---------------TTC------TTC---GGGTTCACCTCGAAGGCCGAAAGCATG---------------CGCCCCGAGGTC---GCA---TCC---ACG---TTC---AAA---GTACTG---CGTAACGTTACCGTTGTG---------------------------------------------------------------TTGTGG---------TCCGCGTATCCCGTCGTGTGGCTGATCGGCAGCGAAGGT---GCGGGA---------------ATCGTGCCGCTGAACATCGAGACGCTGCTGTTCATGGTGCTTGACGTGAGCGCGAAGGTCGGCTTCGGGCTCATCCTCCTGCGCAGTCGTGCGATCTTCGGCGAAGCCGAAGCGCCGGAGCCGTCCGCCGGCGACGGCGCGGCCGCGACCAGCGAC--------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------MLELLPTAVEGVSQAQITGRPEWIWLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIAFTMYLSMLLGYG----------LTMVPFGGEQNPIYWARYADW--------LFTTPLLLLDLALL--------VDADQ-GT------------ILA-LVGADGIMIGTGLVGA---L--------------------------T-KV---Y---------SYR------FVW-WAISTAAMLYILYVL-----F--F-GFTSKAESM-----RPEV-A-S-T-F-K-VL-RNVTVV---------------------LW---SAYPVVWLIGSEG-AG-----IVPLNIETLLFMVLDVSAKVGFGLILLRSRAIFGEAEAPEPSAGDGAAATSD----------------------------- [bacteriorhodopsin]_X70293 [bacteriorhodopsin] Halobacterium_sp_X70293 gi|43642|gb|X70293| Halobacterium sp. bop gene for bacterio-opsin. Halobacterium sp. bop gene for bacterio-opsin. X70293 [[other rhodopsin/bacteriorhodopsin-like 1]] other rhodopsin bacteriorhodopsin-like 1 bacteriorhodopsin proton pump D97 ; D108 light-energy conversion (ion transport) Green (L105) [Archaea/Euryarchaeota/Halobacteria/Halobacteriales/Halobacteriaceae/Halobacterium] taxon:35744 genomic DNA strain 16-FEB-1993 #na #na #na #na #na Direct Submission Soppa,J.A. Submitted (03-FEB-1993) J.A. Soppa, Max-Planck-Inst fuer Biochemie, Am Klopferspitz, W8033 Martinsried, FRG #na #na AGTTACACACATATCCTCGTTAGGTACTGTTGCATGTTGGAGTTATTGCCAACAGCAGTGGAGGGGGTATCGCAGGCCCAGATCACCGGACGTCCGGAGTGGATCTGGCTAGCGCTCGGTACGGCGCTAATGGGACTCGGGACGCTCTATTTCCTCGTGAAAGGGATGGGCGTCTCGGACCCAGATGCAAAGAAATTCTACGCCATCACGACGCTCGTCCCAGCCATCGCGTTCACGATGTACCTCTCGATGCTGCTGGGGTACGGCCTCACAATGGTACCGTTCGGTGGGGAGCAAAACCCCATCTACTGGGCGCGGTACGCTGACTGGCTGTTCACCACGCCGCTGTTGTTGTTAGACCTCGCGTTGCTCGTTGACGCGGATCAGGGAACGATCCTTGCGCTCGTCGGTGCCGACGGCATCATGATCGGGACCGGCCTGGTCGGCGCACTGACGAAGGTCTACTCGTACCGCTTCGTGTGGTGGGCGATCAGCACCGCAGCGATGCTGTACATCCTGTACGTGCTGTTCTTCGGGTTCACCTCGAAGGCCGAAAGCATGCGCCCCGAGGTCGCATCCACGTTCAAAGTACTGCGTAACGTTACCGTTGTGTTGTGGTCCGCGTATCCCGTCGTGTGGCTGATCGGCAGCGAAGGTGCGGGAATCGTGCCGCTGAACATCGAGACGCTGCTGTTCATGGTGCTTGACGTGAGCGCGAAGGTCGGCTTCGGGCTCATCCTCCTGCGCAGTCGTGCGATCTTCGGCGAAGCCGAAGCGCCGGAGCCGTCCGCCGGCGACGGCGCGGCCGCGACCAGCGAC SYTHILVRYCCMLELLPTAVEGVSQAQITGRPEWIWLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVPFGGEQNPIYWARYADWLFTTPLLLLDLALLVDADQGTILALVGADGIMIGTGLVGALTKVYSYRFVWWAISTAAMLYILYVLFFGFTSKAESMRPEVASTFKVLRNVTVVLWSAYPVVWLIGSEGAGIVPLNIETLLFMVLDVSAKVGFGLILLRSRAIFGEAEAPEPSAGDGAAATSD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTTACACACATATCCTCGTTAGGTACTGTTGCATGTTGGAGTTATTGCCAACAGCAGTGGAGGGGGTATCGCAGGCCCAGATCACCGGACGTCCGGAGTGGATCTGGCTAGCGCTCGGTACGGCGCTAATGGGACTCGGGACGCTCTATTTCCTCGTGAAAGGGATGGGCGTCTCGGACCCAGATGCAAAGAAATTCTACGCCATCACGACGCTCGTCCCAGCCATCGCGTTCACGATGTACCTCTCGATGCTGCTGGGGTACGGC------------------------------CTCACAATGGTACCGTTCGGTGGGGAGCAAAACCCCATCTACTGGGCGCGGTACGCTGACTGG------------------------CTGTTCACCACGCCGCTGTTGTTGTTAGACCTCGCGTTGCTC------------------------GTTGACGCGGATCAG---GGAACG------------------------------------ATCCTTGCG---CTCGTCGGTGCCGACGGCATCATGATCGGGACCGGCCTGGTCGGCGCA---------CTG------------------------------------------------------------------------------ACG---AAGGTC---------TAC---------------------------TCGTACCGC------------------TTCGTGTGG---TGGGCGATCAGCACCGCAGCGATGCTGTACATCCTGTACGTGCTG---------------TTC------TTC---GGGTTCACCTCGAAGGCCGAAAGCATG---------------CGCCCCGAGGTC---GCA---TCC---ACG---TTC---AAA---GTACTG---CGTAACGTTACCGTTGTG---------------------------------------------------------------TTGTGG---------TCCGCGTATCCCGTCGTGTGGCTGATCGGCAGCGAAGGT---GCGGGA---------------ATCGTGCCGCTGAACATCGAGACGCTGCTGTTCATGGTGCTTGACGTGAGCGCGAAGGTCGGCTTCGGGCTCATCCTCCTGCGCAGTCGTGCGATCTTCGGCGAAGCCGAAGCGCCGGAGCCGTCCGCCGGCGACGGCGCGGCCGCGACCAGCGAC--------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------SYTHILVRYCCMLELLPTAVEGVSQAQITGRPEWIWLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIAFTMYLSMLLGYG----------LTMVPFGGEQNPIYWARYADW--------LFTTPLLLLDLALL--------VDADQ-GT------------ILA-LVGADGIMIGTGLVGA---L--------------------------T-KV---Y---------SYR------FVW-WAISTAAMLYILYVL-----F--F-GFTSKAESM-----RPEV-A-S-T-F-K-VL-RNVTVV---------------------LW---SAYPVVWLIGSEG-AG-----IVPLNIETLLFMVLDVSAKVGFGLILLRSRAIFGEAEAPEPSAGDGAAATSD----------------------------- [bacteriorhodopsin]_HM475120 [bacteriorhodopsin] clone_bR-e12_HM475120 gi|299772641|gb|HM475120| Uncultured bacterium clone bR-e12 bacteriorhodopsin (bop) gene, partial cds. Uncultured bacterium clone bR-e12 bacteriorhodopsin (bop) gene, partial cds. HM475120 [[other rhodopsin/bacteriorhodopsin-like 1]] other rhodopsin bacteriorhodopsin-like 1 bacteriorhodopsin proton pump D97 ; D108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 03-juil-10 #na saltern soil other terrestrial 23.1 120.1 One partial bacteriorhodopsin sequence of genomic DNA from saltern soil Lin,S.-J., Liao,H.-C. and Chu,W.-S. Unpublished #na #na GACTGGTTGTTCACGACACCGTTGCTCCTACCTGACCTGGCGTTGCTCGTCGACGCCGACCAGGGGACTATTCTCGCCCTCGTGGGCGCGGACGGTATCATGATCGGTACCGGTCTCGTCGGCGCGCTCACGAAGGTCTACGAGTTCCGGTTCATCTGGTGGGCCATCAGCACGGCCGCGATGCTGTACATCCTGTACGTGCTGTTCTTCGGCTTCACCGCGAAGGCCGAGGAGATGCGCCCGGAGGTCGCCTCCACGTTCAAGGTGTTGCGTAACGTCGTCCTCGTCCTGTGGTCGGCGTATCCGATCGTGTGGCTGGTCGGGAGCGAGGGCGCGGGCATCGTCCCCCTGAGCATCGAGACGCTGCTGTTCATGGTGCTCGACCT DWLFTTPLLLPDLALLVDADQGTILALVGADGIMIGTGLVGALTKVYEFRFIWWAISTAAMLYILYVLFFGFTAKAEEMRPEVASTFKVLRNVVLVLWSAYPIVWLVGSEGAGIVPLSIETLLFMVLD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTGG------------------------TTGTTCACGACACCGTTGCTCCTACCTGACCTGGCGTTGCTC------------------------GTCGACGCCGACCAG---GGGACT------------------------------------ATTCTCGCC---CTCGTGGGCGCGGACGGTATCATGATCGGTACCGGTCTCGTCGGCGCG---------CTC------------------------------------------------------------------------------ACG---AAGGTC---------TAC---------------------------GAGTTCCGG------------------TTCATCTGG---TGGGCCATCAGCACGGCCGCGATGCTGTACATCCTGTACGTGCTG---------------TTC------TTC---GGCTTCACCGCGAAGGCCGAGGAGATG---------------CGCCCGGAGGTC---GCC---TCC---ACG---TTC---AAG---GTGTTG---CGTAACGTCGTCCTCGTC---------------------------------------------------------------CTGTGG---------TCGGCGTATCCGATCGTGTGGCTGGTCGGGAGCGAGGGC---GCGGGC---------------ATCGTCCCCCTGAGCATCGAGACGCTGCTGTTCATGGTGCTCGAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DW--------LFTTPLLLPDLALL--------VDADQ-GT------------ILA-LVGADGIMIGTGLVGA---L--------------------------T-KV---Y---------EFR------FIW-WAISTAAMLYILYVL-----F--F-GFTAKAEEM-----RPEV-A-S-T-F-K-VL-RNVVLV---------------------LW---SAYPIVWLVGSEG-AG-----IVPLSIETLLFMVLD------------------------------------------------------------------ [bacteriorhodopsin]_HM475113 [bacteriorhodopsin] clone_bR-a11_HM475113 gi|299772627|gb|HM475113| Uncultured bacterium clone bR-a11 bacteriorhodopsin (bop) gene, partial cds. Uncultured bacterium clone bR-a11 bacteriorhodopsin (bop) gene, partial cds. HM475113 [[other rhodopsin/bacteriorhodopsin-like 1]] other rhodopsin bacteriorhodopsin-like 1 bacteriorhodopsin proton pump na ; D108 light-energy conversion (ion transport) Green (L105) [Bacteria/environmental samples] taxon:77133 genomic DNA other 03-juil-10 #na saltern soil other terrestrial 23.1 120.1 One partial bacteriorhodopsin sequence of genomic DNA from saltern soil Lin,S.-J., Liao,H.-C. and Chu,W.-S. Unpublished #na #na ACGCCGCTCCTGCTGCTCGATCTCGCCCTACTCGCGAACGCGAGTCGAATCGAGACCAGTGCCCTGATCATCCTCGACGGGTTCATGATCGTCACGGGACTGGTCGGCGCACTGTCGAAGCAGATGACCTTCCGCTACACGTGGTGGTTCATCAGCACCGTCCCGATGATTCTCGTGCTTTACTTCCTGTACAGCGTCCTGACGGCGCGCGTTCAGGAGATGGGCGACGACGTCAAAGGCACGTTCACGGCGTTGCGTAATCTTACGCTCGTGCTCTGGAGCCTCTACCCTGTCCTGTGGATTGTCGGGACCGAGGGTGCCGGCATCGTCAACCTGTACATCGAGACGCTTGGGTTCATGGTGCTCGACC TPLLLLDLALLANASRIETSALIILDGFMIVTGLVGALSKQMTFRYTWWFISTVPMILVLYFLYSVLTARVQEMGDDVKGTFTALRNLTLVLWSLYPVLWIVGTEGAGIVNLYIETLGFMVLD ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCCGCTCCTGCTGCTCGATCTCGCCCTACTC------------------------GCGAACGCGAGTCGA---ATCGAG------------------------------------ACCAGTGCC---CTGATCATCCTCGACGGGTTCATGATCGTCACGGGACTGGTCGGCGCA---------CTG------------------------------------------------------------------------------TCG---AAGCAG---------ATG---------------------------ACCTTCCGC------------------TACACGTGG---TGGTTCATCAGCACCGTCCCGATGATTCTCGTGCTTTACTTCCTG---------------TAC------AGC---GTCCTGACGGCGCGCGTTCAGGAGATG---------------GGCGACGACGTC---AAA---GGC---ACG---TTC---ACG---GCGTTG---CGTAATCTTACGCTCGTG---------------------------------------------------------------CTCTGG---------AGCCTCTACCCTGTCCTGTGGATTGTCGGGACCGAGGGT---GCCGGC---------------ATCGTCAACCTGTACATCGAGACGCTTGGGTTCATGGTGCTCGAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TPLLLLDLALL--------ANASR-IE------------TSA-LIILDGFMIVTGLVGA---L--------------------------S-KQ---M---------TFR------YTW-WFISTVPMILVLYFL-----Y--S-VLTARVQEM-----GDDV-K-G-T-F-T-AL-RNLTLV---------------------LW---SLYPVLWIVGTEG-AG-----IVNLYIETLGFMVLD------------------------------------------------------------------ [xenorhodopsin]_JN603996 [xenorhodopsin] clone_CV1_JN603996 gi|390195991|gb|JN603996| Uncultured archaeon clone CV1 xenorhodopsin gene, partial cds. Uncultured archaeon clone CV1 xenorhodopsin gene, partial cds. JN603996 [[other rhodopsin/xenorhodopsin cluster]] other rhodopsin xenorhodopsin cluster xenorohodopsin unknown D97 ; A108 unknown unknown (I105) [Archaea/environmental samples] taxon:115547 genomic DNA other 12-juin-12 01-oct-09 hypersaline crystallizer pond other marine 32.6 -117.1 Xenorhodopsins, an enigmatic new class of microbial rhodopsins horizontally transferred between archaea and bacteria Ugalde,J.A., Podell,S., Narasingarao,P. and Allen,E.E. Biol. Direct 6, 52 (2011) 21985229 #na GTGGTTTGGTCCGGGCTGATGTATACGAACTTCCTGAACCAGTCGTTCCTAAGCGACTATGCATGGTACATGGACTGGATGGTTTCCACTCCGCTGATACTCTTGGCTCTCGGCCTGACGGCCTTCCACGGAGCAGACACGAAGCGTTATGACCTGCTTGGAGCTCTATTAGGCGCCGAGTTTACACTCGTCGTTACAGGGCTGATCGCGCAGGCACAGGGAAGCATCACACCGTATTACGTTGGTGTATTGCTTCTTCTAGGTGTAGTGTATCTGCTTGCGAAGCCGTTCAGGGAGATCGCAGAGGAATCTTCAGATGGACTGGCTAGAGCTTACAAGCTTCTAGCAGGGTATATAGGAATCTTCTTCCTGTCTTACCCAACAGTCTGGTACATCTCTGGAATCGACGCTCTGCCAGGCGGTCTAAATGTTTTGGACCCTACGCAGACTTCGATTGCACTCGTCGTCCTGCCGTTC VVWSGLMYTNFLNQSFLSDYAWYMDWMVSTPLILLALGLTAFHGADTKRYDLLGALLGAEFTLVVTGLIAQAQGSITPYYVGVLLLLGVVYLLAKPFREIAEESSDGLARAYKLLAGYIGIFFLSYPTVWYISGIDALPGGLNVLDPTQTSIALVVLPF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGGTTTGGTCCGGGCTGATGTATACGAACTTCCTG---------------------------------------------------------------AACCAGTCGTTCCTAAGCGACTATGCATGGTACATGGACTGG------------------------ATGGTTTCCACTCCGCTGATACTCTTGGCTCTCGGCCTGACGGCCTTCCAC---------GGA---GCAGACACGAAGCGTTATGACCTG------------------------------------CTTGGAGCT---CTATTAGGCGCCGAGTTTACACTCGTCGTTACAGGGCTGATCGCGCAG---------GCA---------------------------------------------------------------------------------------------------------------------------------CAGGGAAGC------------------ATCACACCG---TATTACGTTGGTGTATTGCTTCTTCTAGGTGTAGTGTATCTGCTT------------------------GCGAAGCCGTTCAGGGAGATCGCAGAGGAATCT---------------TCAGATGGACTG---GCT---AGA---GCT---TAC---AAG---CTTCTA---GCAGGGTATATAGGAATC---------------------------------------------------------------TTCTTC---------CTGTCTTACCCAACAGTCTGGTACATCTCTGGAATCGACGCTCTGCCA---GGCGGTCTAAATGTTTTGGACCCTACGCAGACTTCGATTGCACTCGTCGTCCTGCCGTTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------VVWSGLMYTNFL---------------------NQSFLSDYAWYMDW--------MVSTPLILLALGLTAFH---G-ADTKRYDL------------LGA-LLGAEFTLVVTGLIAQ---A-------------------------------------------QGS------ITP-YYVGVLLLLGVVYLL--------AKPFREIAEES-----SDGL-A-R-A-Y-K-LL-AGYIGI---------------------FF---LSYPTVWYISGIDALP-GGLNVLDPTQTSIALVVLPF----------------------------------------------------------------- [xenorhodopsin]_JN603997 [xenorhodopsin] clone_CV2_JN603997 gi|390195993|gb|JN603997| Uncultured archaeon clone CV2 xenorhodopsin gene, partial cds. Uncultured archaeon clone CV2 xenorhodopsin gene, partial cds. JN603997 [[other rhodopsin/xenorhodopsin cluster]] other rhodopsin xenorhodopsin cluster xenorohodopsin unknown D97 ; A108 unknown unknown (I105) [Archaea/environmental samples] taxon:115547 genomic DNA other 12-juin-12 01-oct-09 hypersaline crystallizer pond other marine 32.6 -117.1 Xenorhodopsins, an enigmatic new class of microbial rhodopsins horizontally transferred between archaea and bacteria Ugalde,J.A., Podell,S., Narasingarao,P. and Allen,E.E. Biol. Direct 6, 52 (2011) 21985229 #na GTGGTTTGGTCCGGGCTGATGTATACGAACTTCCTGAGCCAGTCGTTCCTAAGCGACTATGCATGGTACATGGACTGGATGGTTTCCACTCCGCTGATACTCTTGGCTCTCGGCCTGACGGCCTTCCACGGAGCAGACACGAAGCGTTATGACCTGCTTGGAGCTCTATTAGGCGCCGAGTTTACACTCGTCGTTACAGGGCTGATCGCGCAGGCACAGGGAAGCATCACACCGTATTACGTTGGTGTATTGCTTCTTCTAGGTGTAGTGTATCTGCTTGCGAAGCCGTTCAGGGAGATCGCAGAGGAATCTTCAGATGGACTGGCTAGAGCTTACAAGCTTCTAGCAGGGTATATAGGAATCTTCTTCCTGTCTTACCCAACAGTCTGGTACATCTCTGGAATCGACGCTCTGCCAGGCGGTCTAAATGTTTTGGACCCTACGCAGACTTCGATTGCACTCGTCGTCCTGCCGTTC VVWSGLMYTNFLSQSFLSDYAWYMDWMVSTPLILLALGLTAFHGADTKRYDLLGALLGAEFTLVVTGLIAQAQGSITPYYVGVLLLLGVVYLLAKPFREIAEESSDGLARAYKLLAGYIGIFFLSYPTVWYISGIDALPGGLNVLDPTQTSIALVVLPF ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGGTTTGGTCCGGGCTGATGTATACGAACTTCCTG---------------------------------------------------------------AGCCAGTCGTTCCTAAGCGACTATGCATGGTACATGGACTGG------------------------ATGGTTTCCACTCCGCTGATACTCTTGGCTCTCGGCCTGACGGCCTTCCAC---------GGA---GCAGACACGAAGCGTTATGACCTG------------------------------------CTTGGAGCT---CTATTAGGCGCCGAGTTTACACTCGTCGTTACAGGGCTGATCGCGCAG---------GCA---------------------------------------------------------------------------------------------------------------------------------CAGGGAAGC------------------ATCACACCG---TATTACGTTGGTGTATTGCTTCTTCTAGGTGTAGTGTATCTGCTT------------------------GCGAAGCCGTTCAGGGAGATCGCAGAGGAATCT---------------TCAGATGGACTG---GCT---AGA---GCT---TAC---AAG---CTTCTA---GCAGGGTATATAGGAATC---------------------------------------------------------------TTCTTC---------CTGTCTTACCCAACAGTCTGGTACATCTCTGGAATCGACGCTCTGCCA---GGCGGTCTAAATGTTTTGGACCCTACGCAGACTTCGATTGCACTCGTCGTCCTGCCGTTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------VVWSGLMYTNFL---------------------SQSFLSDYAWYMDW--------MVSTPLILLALGLTAFH---G-ADTKRYDL------------LGA-LLGAEFTLVVTGLIAQ---A-------------------------------------------QGS------ITP-YYVGVLLLLGVVYLL--------AKPFREIAEES-----SDGL-A-R-A-Y-K-LL-AGYIGI---------------------FF---LSYPTVWYISGIDALP-GGLNVLDPTQTSIALVVLPF----------------------------------------------------------------- [xenorhodopsin]_GL982576 [xenorhodopsin] Candidatus_Nanosalina_sp_J07AB43_scf_7180000030744_Xenorhodopsin_WGS_GL982576 gi|339757416|gb|GL982576| Candidatus Nanosalina sp J07AB43 genomic scaffold scf 7180000030744, whole genome shotgun sequence Candidatus Nanosalina sp J07AB43 genomic scaffold scf 7180000030744, whole genome shotgun sequence GL982576 [[other rhodopsin/xenorhodopsin cluster]] other rhodopsin xenorhodopsin cluster xenorohodopsin unknown D97 ; A108 unknown unknown (I105) [Archaea/Euryarchaeota/Nanohaloarchaea/Candidatus Nanosalina] taxon:889948 genomic_DNA strain 11-mars-13 #na Lake_Tyrrell other freshwater -35.370329 142.84 De novo metagenomic assembly reveals abundant novel major lineage of Archaea in hypersaline microbial communities Narasingarao,P., Podell,S., Ugalde,J.A., BrochierArmanet,C., Emerson,J.B., Brocks,J.J., Heidelberg,K.B., Banfield,J.F. and Allen,E.E. ISME J (2011) In press 21716304 metagenomic ATGGTATACGAAGCTATTACAGCTGGAGGATTTGGAAGCCAGCCCTTTATCCTGGCGTATATTATTACCGCCATGATTTCAGGGCTGCTGTTCCTGTACCTGCCAAGGAAGCTTGACGTACCGCAGAAGTTCGGTATCATCCACTTCTTCATAGTGGTTTGGTCCGGGCTGATGTATACGAACTTCTTGAACCAGTCGTTCCTAAGCGACTACGCATGGTACATGGACTGGATGGTTTCCACTCCGCTGATACTCTTGGCTCTCGGCCTGACGGCCTTCCACGGAGCAGACACGAAGCGTTATGACCTGCTTGGAGCACTTCTAGGTGCCGAGTTCACACTCGTCATTACAGGGCTGCTTGCACAGGCACAGGGAAGCATTACACCTTATTATGTTGGTGTATTGCTTCTTCTAGGTGTAGTGTATCTGCTTGCGAAGCCGTTCAGGGAGATCGCAGAGGAATCTTCAGATGGACTGGCTAGAGCCTACAAGATTCTAGCAGGGTATATAGGAATCTTCTTCCTGTCTTACCCAACAGTCTGGTATATCTCTGGAATCGATGCTCTGCCAGGCAGTCTAAACATTTTGGACCCTACGCAGACTTCGATTGCACTGGTAGTCCTGCCATTCTTCTGTAAGCAGGTCTACGGATTCCTGGATATGTACCTGATTCACAAGGCCGAG MVYEAITAGGFGSQPFILAYIITAMISGLLFLYLPRKLDVPQKFGIIHFFIVVWSGLMYTNFLNQSFLSDYAWYMDWMVSTPLILLALGLTAFHGADTKRYDLLGALLGAEFTLVITGLLAQAQGSITPYYVGVLLLLGVVYLLAKPFREIAEESSDGLARAYKILAGYIGIFFLSYPTVWYISGIDALPGSLNILDPTQTSIALVVLPFFCKQVYGFLDMYLIHKAE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGTATACGAAGCTATTACAGCTGGAGGATTTGGAAGCCAGCCCTTTATCCTGGCGTATATTATTACCGCCATGATTTCAGGGCTGCTGTTCCTGTACCTGCCAAGGAAGCTT------GACGTACCGCAGAAGTTCGGTATCATCCACTTCTTCATAGTGGTTTGGTCCGGGCTGATGTATACGAACTTCTTG---------------------------------------------------------------AACCAGTCGTTCCTAAGCGACTACGCATGGTACATGGACTGG------------------------ATGGTTTCCACTCCGCTGATACTCTTGGCTCTCGGCCTGACGGCCTTCCAC---------GGA---GCAGACACGAAGCGTTATGACCTG------------------------------------CTTGGAGCA---CTTCTAGGTGCCGAGTTCACACTCGTCATTACAGGGCTGCTTGCACAG---------GCA---------------------------------------------------------------------------------------------------------------------------------CAGGGAAGC------------------ATTACACCT---TATTATGTTGGTGTATTGCTTCTTCTAGGTGTAGTGTATCTGCTT------------------------GCGAAGCCGTTCAGGGAGATCGCAGAGGAATCT---------------TCAGATGGACTG---GCT---AGA---GCC---TAC---AAG---ATTCTA---GCAGGGTATATAGGAATC---------------------------------------------------------------TTCTTC---------CTGTCTTACCCAACAGTCTGGTATATCTCTGGAATCGATGCTCTGCCA---GGCAGTCTAAACATTTTGGACCCTACGCAGACTTCGATTGCACTGGTAGTCCTGCCATTCTTCTGTAAGCAGGTCTACGGATTCCTGGATATGTACCTGATTCACAAGGCCGAG--------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------MVYEAITAGGFGSQPFILAYIITAMISGLLFLYLPRKL--DVPQKFGIIHFFIVVWSGLMYTNFL---------------------NQSFLSDYAWYMDW--------MVSTPLILLALGLTAFH---G-ADTKRYDL------------LGA-LLGAEFTLVITGLLAQ---A-------------------------------------------QGS------ITP-YYVGVLLLLGVVYLL--------AKPFREIAEES-----SDGL-A-R-A-Y-K-IL-AGYIGI---------------------FF---LSYPTVWYISGIDALP-GSLNILDPTQTSIALVVLPFFCKQVYGFLDMYLIHKAE----------------------------------------------- [xenorhodopsin]_NC_003272 [xenorhodopsin] 17227497_3831313_3832098_Nostoc_sp_PCC_7120_Xenorhodopsin_genome gi|17227497|gb|NC_003272| Nostoc sp PCC 7120 chromosome, complete genome Nostoc sp PCC 7120 chromosome, complete genome NC_003272 [[other rhodopsin/xenorhodopsin cluster]] other rhodopsin xenorhodopsin cluster xenorohodopsin unknown D97 ; S108 unknown Green (L105) [Bacteria/Cyanobacteria/Nostocales/Nostocaceae/Nostoc] taxon:103690 genomic_DNA strain 10-juin-13 #na #na #na #na #na #na #na #na #na #na ATGAATTTGGAGAGTCTTTTACACTGGATTTATGTTGCGGGAATGACAATTGGTGCATTGCACTTTTGGTCACTTAGTCGAAATCCGCGCGGTGTTCCCCAGTACGAATACCTTGTGGCGATGTTTATTCCCATTTGGTCGGGACTAGCCTATATGGCAATGGCAATAGACCAAGGTAAAGTTGAAGCGGCTGGGCAAATTGCCCACTATGCCCGTTATATTGATTGGATGGTGACAACACCATTATTACTGCTATCTCTTTCTTGGACAGCGATGCAGTTTATCAAAAAAGATTGGACACTCATTGGTTTTTTGATGAGTACCCAGATAGTTGTAATTACCTCTGGGTTAATCGCAGATTTATCTGAGCGCGATTGGGTGAGATATCTATGGTATATCTGCGGGGTTTGCGCTTTTCTCATTATTCTTTGGGGTATTTGGAATCCATTGCGCGCCAAAACCAGAACTCAAAGTTCAGAACTAGCGAACTTATACGATAAGCTTGTTACTTATTTTACAGTGCTTTGGATAGGCTACCCAATAGTCTGGATTATTGGCCCTAGTGGTTTTGGCTGGATAAATCAAACTATAGATACATTTTTGTTTTGTCTACTGCCCTTTTTCTCCAAGGTTGGATTTAGTTTTCTGGATTTACACGGCTTACGTAATCTCAATGATTCCCGCCAAACTACTGGCGATCGCTTTGCGGAAAATACTTTACAGTTTGTAGAAAATATTACATTATTTGCTAACTCACGACGGCAACAATCACGCAGAAGAGTT MNLESLLHWIYVAGMTIGALHFWSLSRNPRGVPQYEYLVAMFIPIWSGLAYMAMAIDQGKVEAAGQIAHYARYIDWMVTTPLLLLSLSWTAMQFIKKDWTLIGFLMSTQIVVITSGLIADLSERDWVRYLWYICGVCAFLIILWGIWNPLRAKTRTQSSELANLYDKLVTYFTVLWIGYPIVWIIGPSGFGWINQTIDTFLFCLLPFFSKVGFSFLDLHGLRNLNDSRQTTGDRFAENTLQFVENITLFANSRRQQSRRRV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAATTTGGAGAGTCTTTTACACTGGATTTATGTTGCGGGAATGACAATTGGTGCATTGCACTTTTGGTCACTTAGTCGAAATCCGCGCGGTGTTCCCCAGTACGAATACCTTGTGGCGATGTTTATTCCCATTTGGTCGGGACTAGCCTATATGGCAATGGCAATAGACCAAGGT------------------------------------------AAAGTTGAAGCGGCTGGGCAAATTGCCCACTATGCCCGTTATATTGATTGG------------------------ATGGTGACAACACCATTATTACTGCTATCTCTTTCTTGGACAGCGATGCAG---------TTT---ATCAAAAAAGATTGG---ACACTC------------------------------------ATTGGTTTT---TTGATGAGTACCCAGATAGTTGTAATTACCTCTGGGTTAATCGCAGAT---------TTA------------------------------------------------------------------------------TCT---GAGCGC---------GAT---------------------------TGGGTGAGA------------------TATCTATGG---TATATCTGCGGGGTTTGCGCTTTTCTCATTATTCTTTGGGGTATT---------------TGG------AAT---CCATTGCGCGCCAAAACCAGAACTCAA---------------AGTTCAGAACTA---GCG---AAC---TTA---TAC---GAT---AAGCTT---GTTACTTATTTTACAGTG---------------------------------------------------------------CTTTGG---------ATAGGCTACCCAATAGTCTGGATTATTGGCCCTAGTGGT------------------TTTGGCTGGATAAATCAAACTATAGATACATTTTTGTTTTGTCTACTGCCCTTTTTCTCCAAGGTTGGATTTAGTTTTCTGGATTTACACGGCTTACGTAATCTCAATGATTCCCGCCAA---ACTACTGGCGATCGCTTTGCGGAAAATACTTTACAGTTTGTAGAAAATATTACATTATTTGCTAACTCACGACGGCAACAATCACGCAGAAGAGTT------------------------------ ---------------------------------------------------------------------------------------------------------------------------MNLESLLHWIYVAGMTIGALHFWSLSRNPRGVPQYEYLVAMFIPIWSGLAYMAMAIDQG--------------KVEAAGQIAHYARYIDW--------MVTTPLLLLSLSWTAMQ---F-IKKDW-TL------------IGF-LMSTQIVVITSGLIAD---L--------------------------S-ER---D---------WVR------YLW-YICGVCAFLIILWGI-----W--N-PLRAKTRTQ-----SSEL-A-N-L-Y-D-KL-VTYFTV---------------------LW---IGYPIVWIIGPSG------FGWINQTIDTFLFCLLPFFSKVGFSFLDLHGLRNLNDSRQ-TTGDRFAENTLQFVENITLFANSRRQQSRRRV---------- [xenorhodopsin]_NC_011729 [xenorhodopsin] 218437013_4362426_4363220_Cyanothece_sp_PCC_7424_Xenorhodopsin_genome gi|218437013|gb|NC_011729| Cyanothece sp PCC 7424 chromosome, complete genome Cyanothece sp PCC 7424 chromosome, complete genome NC_011729 [[other rhodopsin/xenorhodopsin cluster]] other rhodopsin xenorhodopsin cluster xenorohodopsin unknown D97 ; A108 unknown Green (L105) [Bacteria/Cyanobacteria/Oscillatoriophycideae/Chroococcales/Cyanothece] taxon:65393 genomic_DNA strain 10-juin-13 #na #na Arctic Ocean marine 71.4 -156.8 #na #na #na #na #na ATGAATTGGCAAGATATTTTTCATTGGATTTATGTGTTAGGGATGGTAATAGGAGCCTTTCATTTCTGGAGTTTAAGCCGCCAACCTCGTGGTGTGCCGCAATATGAGTATCTTATTGCTATTTTTATTCCAATTTGGTCAGGATTAGCTTACATGGCTATGGCATTAAATCAGGGTAAAATTGAGTCTGCGAATCAAATTGCTCATTATGCCCGTTATGTAGACTGGATTGTAACTACTCCTCTGTTGCTATTAGCCCTATCTTGGACAGCAATGCAGTTTATTAAAAAAGATTGGACATTGATTGGTTTTTTAATGAGTACCCAAGTTGTCGTTATTACCACAGGTTTAATTGCTGATTTATCAGAACGAGAATCTGTCAGATATCTTTGGTATATTTGTGGTGTTGTCGCATTTTTAATTGTGTTGTGGGGTATTTGGGGGCCTTTACGGGAAAAAACCCACGAACAGGGACGAGATTTAATAGTCCTTTATAATAAACTTTTGATCTATTTTACGGTTTTATGGGTTTGCTATCCCCTTGTTTGGATTATTGGACCTTCTGGATTAGGTTGGATTAATCAAACGACTGATACTTTTCTATTTTGTCTTTTGCCGTTTTTCTCAAAAGTAGGTTTCAGCTTTTTAGATTTACACGGACTGCGAAATTTACACACCTCGACAACCCCAACTACAGCAGACCGTTTTGTTAGCAGCACCTTTGAATTTATTGGTTTGGTTATCCCTATTCCCGTATCAACCCGCCAAAGAAATAAAACTCGATATTTACGC MNWQDIFHWIYVLGMVIGAFHFWSLSRQPRGVPQYEYLIAIFIPIWSGLAYMAMALNQGKIESANQIAHYARYVDWIVTTPLLLLALSWTAMQFIKKDWTLIGFLMSTQVVVITTGLIADLSERESVRYLWYICGVVAFLIVLWGIWGPLREKTHEQGRDLIVLYNKLLIYFTVLWVCYPLVWIIGPSGLGWINQTTDTFLFCLLPFFSKVGFSFLDLHGLRNLHTSTTPTTADRFVSSTFEFIGLVIPIPVSTRQRNKTRYLR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAATTGGCAAGATATTTTTCATTGGATTTATGTGTTAGGGATGGTAATAGGAGCCTTTCATTTCTGGAGTTTAAGCCGCCAACCTCGTGGTGTGCCGCAATATGAGTATCTTATTGCTATTTTTATTCCAATTTGGTCAGGATTAGCTTACATGGCTATGGCATTAAATCAGGGT------------------------------------------AAAATTGAGTCTGCGAATCAAATTGCTCATTATGCCCGTTATGTAGACTGG------------------------ATTGTAACTACTCCTCTGTTGCTATTAGCCCTATCTTGGACAGCAATGCAG---------TTT---ATTAAAAAAGATTGG---ACATTG------------------------------------ATTGGTTTT---TTAATGAGTACCCAAGTTGTCGTTATTACCACAGGTTTAATTGCTGAT---------TTA------------------------------------------------------------------------------TCA---GAACGA---------GAA---------------------------TCTGTCAGA------------------TATCTTTGG---TATATTTGTGGTGTTGTCGCATTTTTAATTGTGTTGTGGGGTATT---------------TGG------GGG---CCTTTACGGGAAAAAACCCACGAACAG---------------GGACGAGATTTA---ATA---GTC---CTT---TAT---AAT---AAACTT---TTGATCTATTTTACGGTT---------------------------------------------------------------TTATGG---------GTTTGCTATCCCCTTGTTTGGATTATTGGACCTTCTGGA------------------TTAGGTTGGATTAATCAAACGACTGATACTTTTCTATTTTGTCTTTTGCCGTTTTTCTCAAAAGTAGGTTTCAGCTTTTTAGATTTACACGGACTGCGAAATTTACACACCTCGACAACCCCAACTACAGCAGACCGTTTTGTTAGCAGCACCTTTGAATTTATTGGTTTGGTTATCCCTATTCCCGTATCAACCCGCCAAAGAAATAAAACTCGATATTTACGC------------------------ ---------------------------------------------------------------------------------------------------------------------------MNWQDIFHWIYVLGMVIGAFHFWSLSRQPRGVPQYEYLIAIFIPIWSGLAYMAMALNQG--------------KIESANQIAHYARYVDW--------IVTTPLLLLALSWTAMQ---F-IKKDW-TL------------IGF-LMSTQVVVITTGLIAD---L--------------------------S-ER---E---------SVR------YLW-YICGVVAFLIVLWGI-----W--G-PLREKTHEQ-----GRDL-I-V-L-Y-N-KL-LIYFTV---------------------LW---VCYPLVWIIGPSG------LGWINQTTDTFLFCLLPFFSKVGFSFLDLHGLRNLHTSTTPTTADRFVSSTFEFIGLVIPIPVSTRQRNKTRYLR-------- [sensory-II/III]_NC_013202 [sensory-II/III] 257386085_2564552_2565283_Halomicrobium_mukohataei_DSM_12286_genome gi|257386085|gb|NC_013202| Halomicrobium mukohataei DSM 12286 chromosome, complete genome Halomicrobium mukohataei DSM 12286 chromosome, complete genome NC_013202 [[other rhodopsin/sensory rhodopsin II-III-like]] other rhodopsin sensory rhodopsin II-III-like sensory rhodopsin type II photosensor D97 ; F108 light-signal conversion (sensory) unknown (N105) [Archaea/Euryarchaeota/Halobacteria/Halobacteriales/Halobacteriaceae/Halomicrobium] taxon:485914 genomic_DNA strain 10-juin-13 #na #na other terrestrial -22.663 -66.236 #na #na #na #na #na ATGATAGAACTCTGGTTCACACTCGGTACGATCGGTATGCTCGCTGGGACGGCAATTCTCGCCTACGGCTTCAGGCTCGTCCCGGCCGAGAGACGCACCCGGTACGCGGTGCTGGTCTCGATTCCCGGCATCGCGATCTTCGCCTACGCGATCATGGCACTCGGCATCGGCGGCTTCGACACGGGAACCCACACCGTCTGGATTCCCCGCTACGTCGACTGGCTGCTGACGACACCCCTGAACGTCCTGTTCCTCGGGCTGTTCGCGGGTGCCGACCGCGAGACGATCGGGAAACTCGTCGGCTTGCAGGTCCTGACGATCGTCTTCGGATTCGCGGGCGCGGTGATCGGAGGGCTGCTCTCCTGGGGACTGTTCGCGCTGGGCGGGCTCGCCTTCGTCGGCGTCGGCTACCTGCTGTACGGCGCGATCACAGACGCGGCCGTCGACACGCTCTCGGAGGTCGGATTCGGTGTCTACGAGACGCTGCGCAACTTCGTCGTCGTGCTCTGGGGCATCTATCCGATCATCTGGATCCTCGGACAGTCCGGACTCGGGCTGATGGACCTCGAAACGACGGCGCTGGTCGTCGCCTACCTCGACGTGGTGACGAAGGTCGGCTTCGGCCTGCTTGCGCTCAGTGGCGAGGCGATCGTCGAAGAACTCGGGACGCAGGTGTTCGAAGACGAGGACGCGGTGATGGCTCCAGACCACGACGCACAGCCGTCTGAC MIELWFTLGTIGMLAGTAILAYGFRLVPAERRTRYAVLVSIPGIAIFAYAIMALGIGGFDTGTHTVWIPRYVDWLLTTPLNVLFLGLFAGADRETIGKLVGLQVLTIVFGFAGAVIGGLLSWGLFALGGLAFVGVGYLLYGAITDAAVDTLSEVGFGVYETLRNFVVVLWGIYPIIWILGQSGLGLMDLETTALVVAYLDVVTKVGFGLLALSGEAIVEELGTQVFEDEDAVMAPDHDAQPSD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGATAGAACTCTGGTTCACACTCGGTACGATCGGTATGCTCGCTGGGACGGCAATTCTCGCCTACGGCTTCAGGCTCGTCCCGGCCGAGAGACGCACCCGGTACGCGGTGCTGGTCTCGATTCCCGGCATCGCGATCTTCGCCTACGCGATCATGGCACTCGGCATCGGC------------------------------------------GGCTTCGACACGGGAACCCACACCGTCTGGATTCCCCGCTACGTCGACTGG------------------------CTGCTGACGACACCCCTGAACGTCCTGTTCCTCGGGCTGTTC------------------------GCGGGTGCCGACCGC---GAGACG------------------------------------ATCGGGAAA---CTCGTCGGCTTGCAGGTCCTGACGATCGTCTTCGGATTCGCGGGCGCG---------GTG------------------------------------------------------------------------------------ATCGGA---------GGG---------------------------CTGCTCTCC------------------TGGGGACTG---TTCGCGCTGGGCGGGCTCGCCTTCGTCGGCGTCGGCTACCTGCTG---------------TAC------GGC---GCGATCACAGACGCGGCCGTCGACACG---------------CTCTCGGAGGTC---GGATTCGGT---GTC---TAC---GAG---ACGCTG---CGCAACTTCGTCGTCGTG---------------------------------------------------------------CTCTGG---------GGCATCTATCCGATCATCTGGATCCTCGGACAGTCCGGA---CTCGGG---------------CTGATGGACCTCGAAACGACGGCGCTGGTCGTCGCCTACCTCGACGTGGTGACGAAGGTCGGCTTCGGCCTGCTTGCGCTCAGTGGCGAGGCGATCGTCGAAGAACTCGGGACGCAGGTGTTCGAAGACGAGGACGCGGTGATGGCTCCAGACCACGACGCACAGCCGTCTGAC--------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------MIELWFTLGTIGMLAGTAILAYGFRLVPAERRTRYAVLVSIPGIAIFAYAIMALGIG--------------GFDTGTHTVWIPRYVDW--------LLTTPLNVLFLGLF--------AGADR-ET------------IGK-LVGLQVLTIVFGFAGA---V----------------------------IG---G---------LLS------WGL-FALGGLAFVGVGYLL-----Y--G-AITDAAVDT-----LSEV-GFG-V-Y-E-TL-RNFVVV---------------------LW---GIYPIIWILGQSG-LG-----LMDLETTALVVAYLDVVTKVGFGLLALSGEAIVEELGTQVFEDEDAVMAPDHDAQPSD----------------------- [sensory-II/III]_NC_006396_1 [sensory-II/III] 55376942_14071_14781_Haloarcula_marismortui_ATCC_43049_Sensory_Rhodopsin_II_complete_cds gi|55376942|gb|NC_006396| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Haloarcula marismortui ATCC 43049 chromosome I, complete sequence NC_006396 [[other rhodopsin/sensory rhodopsin II-III-like]] other rhodopsin sensory rhodopsin II-III-like sensory rhodopsin type II photosensor D97 ; F108 light-signal conversion (sensory) unknown (N105) [Archaea/Euryarchaeota/Halobacteria/Halobacteriales/Halobacteriaceae/Haloarcula] taxon:272569 genomic_DNA strain 10-juin-13 #na #na Dead Sea marine 31.56 35.48 #na #na #na #na #na ATGGCAACGATAACAACCTGGTTCACGCTGGGATTACTGGGTGAACTGCTCGGGACGGCGGTGCTGGCGTACGGCTACACGCTTGTCCCCGAAGAGACGCGGAAGCGGTATCTGCTGCTGATCGCGATTCCGGGTATCGCCATCGTTGCCTACGCGCTGATGGCGCTTGGCTTCGGGTCGATACAGAGCGAGGGGCACGCGGTGTACGTGGTCCGTTACGTCGACTGGCTGTTAACGACGCCGCTCAACGTCTGGTTCCTGGCGCTGCTCGCTGGCGCAAGCCGGGAGGACACGGTGAAACTCGTCGTCCTGCAGGCGTTGACTATCGTCTTCGGATTCGCCGGCGCGGTCACTCCATCACCGGTTAGCTACGCGTTGTTCGCAGTCGGTGGAGCGCTGTTCGGCGGCGTCATCTATCTCCTCTACCGGAACATCGCAGTGGCTGCGAAGTCGACCCTGTCCGACATAGAGGTCAGCCTGTACCGCACACTCCGGAACTTCGTTGTCGTCCTCTGGCTTGTGTATCCGGTCGTCTGGCTACTCGGTGCGGCAGGAGTGGGCCTCATGGATGTCGAGACCGCGACGCTCGTGGTCGTTTACCTCGACGTGGTCACGAAAGTCGGCTTCGGCGTCATTGCCTTGCTGGCGATGATCGACCTCGGCTCAGCCGGGGAGACCGCCGAGGAGCCGACAGCGGTTGCAGGGGAC MATITTWFTLGLLGELLGTAVLAYGYTLVPEETRKRYLLLIAIPGIAIVAYALMALGFGSIQSEGHAVYVVRYVDWLLTTPLNVWFLALLAGASREDTVKLVVLQALTIVFGFAGAVTPSPVSYALFAVGGALFGGVIYLLYRNIAVAAKSTLSDIEVSLYRTLRNFVVVLWLVYPVVWLLGAAGVGLMDVETATLVVVYLDVVTKVGFGVIALLAMIDLGSAGETAEEPTAVAGD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGCAACGATAACAACCTGGTTCACGCTGGGATTACTGGGTGAACTGCTCGGGACGGCGGTGCTGGCGTACGGCTACACGCTTGTCCCCGAAGAGACGCGGAAGCGGTATCTGCTGCTGATCGCGATTCCGGGTATCGCCATCGTTGCCTACGCGCTGATGGCGCTTGGCTTCGGG------------------------------------------TCGATACAGAGCGAGGGGCACGCGGTGTACGTGGTCCGTTACGTCGACTGG------------------------CTGTTAACGACGCCGCTCAACGTCTGGTTCCTGGCGCTGCTC------------------------GCTGGCGCAAGCCGG---GAGGAC------------------------------------ACGGTGAAA---CTCGTCGTCCTGCAGGCGTTGACTATCGTCTTCGGATTCGCCGGCGCG---------GTC------------------------------------------------------------------------------------ACTCCA---------TCA---------------------------CCGGTTAGC------------------TACGCGTTG---TTCGCAGTCGGTGGAGCGCTGTTCGGCGGCGTCATCTATCTCCTC---------------TAC------CGG---AACATCGCAGTGGCTGCGAAGTCGACC---------------CTGTCCGACATA---GAGGTCAGC---CTG---TAC---CGC---ACACTC---CGGAACTTCGTTGTCGTC---------------------------------------------------------------CTCTGG---------CTTGTGTATCCGGTCGTCTGGCTACTCGGTGCGGCAGGA---GTGGGC---------------CTCATGGATGTCGAGACCGCGACGCTCGTGGTCGTTTACCTCGACGTGGTCACGAAAGTCGGCTTCGGCGTCATTGCCTTGCTGGCGATGATCGACCTCGGCTCAGCCGGGGAGACCGCCGAGGAGCCGACAGCGGTTGCAGGGGAC------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------------------------------------MATITTWFTLGLLGELLGTAVLAYGYTLVPEETRKRYLLLIAIPGIAIVAYALMALGFG--------------SIQSEGHAVYVVRYVDW--------LLTTPLNVWFLALL--------AGASR-ED------------TVK-LVVLQALTIVFGFAGA---V----------------------------TP---S---------PVS------YAL-FAVGGALFGGVIYLL-----Y--R-NIAVAAKST-----LSDI-EVS-L-Y-R-TL-RNFVVV---------------------LW---LVYPVVWLLGAAG-VG-----LMDVETATLVVVYLDVVTKVGFGVIALLAMIDLGSAGETAEEPTAVAGD-------------------------------- [sensory-II/III]_NC_006396_2 [sensory-II/III] 55376942_494845_495543_Haloarcula_marismortui_ATCC_43049_Sensory_Rhodopsin_III_complete_cds gi|55376942|gb|NC_006396| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Haloarcula marismortui ATCC 43049 chromosome I, complete sequence NC_006396 [[other rhodopsin/sensory rhodopsin II-III-like]] other rhodopsin sensory rhodopsin II-III-like sensory rhodopsin type III photosensor D97 ; Y108 light-signal conversion (sensory) unknown (I105) [Archaea/Euryarchaeota/Halobacteria/Halobacteriales/Halobacteriaceae/Haloarcula] taxon:272569 genomic_DNA strain 10-juin-13 #na #na Dead Sea marine 31.56 35.48 #na #na #na #na #na ATGGCACAAGAGATCGTTTGGTACGGGGCTGGGGCTGGAGCGTTTTTCGTGTCAGCTGTTGTCTTCGTGTGGTTCGCTGCAACGAGGGGTAATATCAGGTCCTCGTTCTACTACCTGCCGCCGATACACACCTCAGTCGCGGGAGCGGCATACGTGGCGATGGCACTCATAGCGGGCGGCCAGCTCGGGGACACGGTTAGCATCACGACGCTCAGGTTCGCCGATTGGATCGTCTCGACGCCGATCATCACGTACTATCTCGCACGGCTGGCTGGCGTCGACACACAGACGCGGCGGCTCGCAGTGGCCGCAAACGTGGTGATGATCGGCGTGGGATACGGCTTCGTCAGTATGTCGGGGTCGCTCCGGTGGATTGCCTTCGCCGTGTCCACGGTCGCATTCATCGGGCTACTCTACTTGTATATCAAAACGTTTGCCCGGAAAATTAACGCTGCAACAGCGAGCGTCCGCAGCCTGTTCCAGAGCCTCCGAGACTTGACTGTCGTGACGTGGTCACTCTACCCGGTTGTCTACTTCCTGGGTCCTCTCGGGACGGGGATCATTCAGGCCCCTGACCTGAACTTCCTCGTTGCAGTTCTTGACACCATTGCCAAAGTCGGATTTATGTCGATTCTGCTTGTCAGATACAATTCGGTTGAGACGTTCGTCGACAGCTGGTCCGTAGCTCCCGCCAAG MAQEIVWYGAGAGAFFVSAVVFVWFAATRGNIRSSFYYLPPIHTSVAGAAYVAMALIAGGQLGDTVSITTLRFADWIVSTPIITYYLARLAGVDTQTRRLAVAANVVMIGVGYGFVSMSGSLRWIAFAVSTVAFIGLLYLYIKTFARKINAATASVRSLFQSLRDLTVVTWSLYPVVYFLGPLGTGIIQAPDLNFLVAVLDTIAKVGFMSILLVRYNSVETFVDSWSVAPAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGCACAAGAGATCGTTTGGTACGGGGCTGGGGCTGGAGCGTTTTTCGTGTCAGCTGTTGTCTTCGTGTGGTTCGCTGCAACGAGGGGTAATATCAGGTCCTCGTTCTACTACCTGCCGCCGATACACACCTCAGTCGCGGGAGCGGCATACGTGGCGATGGCACTCATAGCGGGC------------------------------------------GGCCAGCTCGGGGACACGGTTAGCATCACGACGCTCAGGTTCGCCGATTGG------------------------ATCGTCTCGACGCCGATCATCACGTACTATCTCGCACGGCTG------------------------GCTGGCGTCGACACA---CAGACG------------------------------------CGGCGGCTC---GCAGTGGCCGCAAACGTGGTGATGATCGGCGTGGGATACGGCTTCGTC---------AGT------------------------------------------------------------------------------------ATGTCG---------GGG---------------------------TCGCTCCGG------------------TGGATTGCC---TTCGCCGTGTCCACGGTCGCATTCATCGGGCTACTCTACTTGTAT---------------ATC------AAA---ACGTTTGCCCGGAAAATTAACGCTGCA---------------ACAGCGAGCGTC---CGC---AGC---CTG---TTC---CAG---AGCCTC---CGAGACTTGACTGTCGTG---------------------------------------------------------------ACGTGG---------TCACTCTACCCGGTTGTCTACTTCCTGGGTCCTCTCGGG------ACG---------GGG---ATCATTCAGGCCCCTGACCTGAACTTCCTCGTTGCAGTTCTTGACACCATTGCCAAAGTCGGATTTATGTCGATTCTGCTTGTCAGATACAATTCGGTTGAGACGTTCGTCGACAGCTGGTCCGTAGCTCCCGCCAAG--------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------MAQEIVWYGAGAGAFFVSAVVFVWFAATRGNIRSSFYYLPPIHTSVAGAAYVAMALIAG--------------GQLGDTVSITTLRFADW--------IVSTPIITYYLARL--------AGVDT-QT------------RRL-AVAANVVMIGVGYGFV---S----------------------------MS---G---------SLR------WIA-FAVSTVAFIGLLYLY-----I--K-TFARKINAA-----TASV-R-S-L-F-Q-SL-RDLTVV---------------------TW---SLYPVVYFLGPLG--T---G-IIQAPDLNFLVAVLDTIAKVGFMSILLVRYNSVETFVDSWSVAPAK----------------------------------- [sensory]_NC_010364 [sensory] 169235049_1293408_1294121_Halobacterium_salinarum_R1_Sensory_Rhodopsin_II_genome gi|169235049|gb|NC_010364| Halobacterium salinarum R1, complete genome Halobacterium salinarum R1, complete genome NC_010364 [[other rhodopsin/sensory rhodopsin-like]] other rhodopsin sensory rhodopsin-like sensory rhodopsin type II photosensor D97 ; Y108 light-signal conversion (sensory) unknown (I105) [Archaea/Euryarchaeota/Halobacteria/Halobacteriales/Halobacteriaceae/Halobacterium] taxon:478009 genomic_DNA strain 10-juin-13 #na #na #na #na #na #na #na #na #na #na ATGGCACTCACGACATGGTTTTGGGTCGGCGCTGTCGGCATGCTCGCTGGCACCGTCCTCCCGATCCGGGACTGCATCCGACACCCATCGCATCGCCGCTATGACCTCGTACTCGCCGGCATCACCGGACTGGCCGCCATCGCGTACACCACGATGGGGCTGGGCATCACCGCAACCACCGTCGGCGACCGCACCGTCTACCTCGCGCGGTACATCGACTGGCTGGTCACAACCCCACTGATCGTGTTGTACCTCGCGATGCTCGCCCGCCCCGGCCACCGCACGTCCGCCTGGCTGCTCGCCGCCGACGTGTTCGTCATCGCCGCCGGGATCGCCGCCGCGCTCACCACGGGCGTGCAGCGCTGGCTGTTTTTCGCCGTCGGCGCTGCCGGCTACGCCGCGCTCCTGTACGGCCTCCTGGGGACGCTGCCGCGCGCGCTCGGCGACGACCCCCGCGTGCGCTCGCTGTTCGTCACGCTTCGCAACATCACGGTCGTCCTCTGGACGCTGTACCCCGTGGTCTGGCTGCTGTCCCCGGCCGGCATCGGCATCCTCCAAACCGAGATGTACACCATCGTCGTGGTCTACCTGGATTTCATCTCGAAGGTCGCGTTCGTGGCGTTCGCCGTGCTCGGTGCCGACGCCGTCAGCCGCCTGGTCGCCGCCGACGCCGCCGCGCCGGCCACCGCGGAACCAACGCCGGACGGCGAC MALTTWFWVGAVGMLAGTVLPIRDCIRHPSHRRYDLVLAGITGLAAIAYTTMGLGITATTVGDRTVYLARYIDWLVTTPLIVLYLAMLARPGHRTSAWLLAADVFVIAAGIAAALTTGVQRWLFFAVGAAGYAALLYGLLGTLPRALGDDPRVRSLFVTLRNITVVLWTLYPVVWLLSPAGIGILQTEMYTIVVVYLDFISKVAFVAFAVLGADAVSRLVAADAAAPATAEPTPDGD ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGCACTCACGACATGGTTTTGGGTCGGCGCTGTCGGCATGCTCGCTGGCACCGTC---CTCCCGATCCGGGACTGCATCCGACACCCATCGCATCGCCGCTATGACCTCGTACTCGCCGGCATCACCGGACTGGCCGCCATCGCGTACACCACGATGGGGCTGGGCATCACC------------------------------------------GCAACCACCGTCGGCGACCGCACCGTCTACCTCGCGCGGTACATCGACTGG------------------------CTGGTCACAACCCCACTGATCGTGTTGTACCTCGCGATGCTC------------------------GCCCGCCCCGGCCAC---CGCACG------------------------------------TCCGCCTGG---CTGCTCGCCGCCGACGTGTTCGTCATCGCCGCCGGGATCGCCGCCGCG---------CTC------------------------------------------------------------------------------------ACCACG---------GGC---------------------------GTGCAGCGC------------------TGGCTGTTT---TTCGCCGTCGGCGCTGCCGGCTACGCCGCGCTCCTGTACGGCCTC---------------CTG------GGG---ACGCTGCCGCGCGCGCTCGGCGACGAC------------------CCCCGCGTG---CGC---TCG---CTG---TTC---GTC---ACGCTT---CGCAACATCACGGTCGTC---------------------------------------------------------------CTCTGG---------ACGCTGTACCCCGTGGTCTGGCTGCTGTCCCCGGCCGGC------------------ATCGGCATCCTCCAAACCGAGATGTACACCATCGTCGTGGTCTACCTGGATTTCATCTCGAAGGTCGCGTTCGTGGCGTTCGCCGTGCTCGGTGCCGACGCCGTCAGCCGCCTGGTCGCCGCCGACGCCGCCGCGCCGGCCACCGCGGAACCAACGCCGGACGGCGAC--------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------MALTTWFWVGAVGMLAGTV-LPIRDCIRHPSHRRYDLVLAGITGLAAIAYTTMGLGIT--------------ATTVGDRTVYLARYIDW--------LVTTPLIVLYLAML--------ARPGH-RT------------SAW-LLAADVFVIAAGIAAA---L----------------------------TT---G---------VQR------WLF-FAVGAAGYAALLYGL-----L--G-TLPRALGDD------PRV-R-S-L-F-V-TL-RNITVV---------------------LW---TLYPVVWLLSPAG------IGILQTEMYTIVVVYLDFISKVAFVAFAVLGADAVSRLVAADAAAPATAEPTPDGD--------------------------- [sensory-I]_NC_010364 [sensory-I] 169235049_1227934_1228653_Halobacterium_salinarum_R1_Sensory_Rhodopsin_I_genome gi|169235049|gb|NC_010364| Halobacterium salinarum R1, complete genome Halobacterium salinarum R1, complete genome NC_010364 [[other rhodopsin/sensory rhodopsin I-like]] other rhodopsin sensory rhodopsin I-like sensory rhodopsin type I photosensor D97 ; Y108 light-signal conversion (sensory) Green (L105) [Archaea/Euryarchaeota/Halobacteria/Halobacteriales/Halobacteriaceae/Halobacterium] taxon:478009 genomic_DNA strain 10-juin-13 #na #na #na #na #na #na #na #na #na #na ATGGACGCCGTCGCAACCGCCTACCTCGGCGGCGCGGTCGCGCTCATCGTCGGTGTGGCGTTCGTCTGGTTGCTGTACCGGTCGTTGGATGGCTCCCCGCATCAGTCGGCGCTCGCGCCGCTGGCCATCATTCCCGTGTTCGCGGGCCTGTCCTACGTGGGGATGGCGTACGACATCGGAACGGTGATCGTAAACGGGAACCAGATCGTCGGGCTGCGGTACATCGACTGGCTCGTGACGACGCCGATCCTCGTGGGGTACGTCGGCTACGCCGCGGGGGCGTCCCGTCGCAGCATCATCGGTGTGATGGTGGCGGACGCGCTCATGATCGCGGTGGGCGCGGGGGCGGTGGTGACTGACGGCACGCTCAAGTGGGCGCTGTTCGGCGTGTCGTCGATCTTCCACCTGTCGCTGTTCGCGTACCTGTACGTGATCTTTCCGCGGGTCGTGCCCGACGTGCCCGAGCAGATCGGGCTGTTCAACCTGCTGAAAAACCACATCGGGCTGCTGTGGTTGGCGTACCCGCTGGTGTGGCTGTTCGGCCCGGCCGGCATCGGGGAGGCAACGGCTGCCGGCGTCGCGCTCACGTACGTGTTCTTGGACGTGCTCGCGAAGGTGCCGTACGTGTATTTCTTCTACGCGCGGCGTCGCGTGTTCATGCACTCGGAGTCGCCGCCGGCTCCCGAGCAGGCGACCGTCGAGGCGACGGCGGCGGAC MDAVATAYLGGAVALIVGVAFVWLLYRSLDGSPHQSALAPLAIIPVFAGLSYVGMAYDIGTVIVNGNQIVGLRYIDWLVTTPILVGYVGYAAGASRRSIIGVMVADALMIAVGAGAVVTDGTLKWALFGVSSIFHLSLFAYLYVIFPRVVPDVPEQIGLFNLLKNHIGLLWLAYPLVWLFGPAGIGEATAAGVALTYVFLDVLAKVPYVYFFYARRRVFMHSESPPAPEQATVEATAAD ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGACGCCGTCGCAACCGCCTACCTCGGCGGCGCGGTCGCGCTCATCGTCGGTGTGGCGTTCGTCTGGTTGCTGTACCGGTCGTTGGATGGCTCCCCGCATCAGTCGGCGCTCGCGCCGCTGGCCATCATTCCCGTGTTCGCGGGCCTGTCCTACGTGGGGATGGCGTACGACATCGGA------------------------------------------ACGGTGATCGTAAACGGGAACCAGATCGTCGGGCTGCGGTACATCGACTGG------------------------CTCGTGACGACGCCGATCCTCGTGGGGTACGTCGGCTACGCC------------------------GCGGGGGCGTCCCGT---CGCAGC------------------------------------ATCATCGGT---GTGATGGTGGCGGACGCGCTCATGATCGCGGTGGGCGCGGGGGCGGTG---------GTG------------------------------------------------------------------------------------ACTGAC---------GGC---------------------------ACGCTCAAG------------------TGGGCGCTG---TTCGGCGTGTCGTCGATCTTCCACCTGTCGCTGTTCGCGTACCTG---------------TAC------GTG---ATCTTTCCGCGGGTCGTGCCCGACGTG---------------CCCGAGCAGATC---------GGG---CTG---TTC---AAC---CTGCTG---AAAAACCACATCGGGCTG---------------------------------------------------------------CTGTGG---------TTGGCGTACCCGCTGGTGTGGCTGTTCGGCCCGGCCGGC------------------ATCGGGGAGGCAACGGCTGCCGGCGTCGCGCTCACGTACGTGTTCTTGGACGTGCTCGCGAAGGTGCCGTACGTGTATTTCTTCTACGCGCGGCGTCGCGTGTTCATGCACTCGGAGTCGCCGCCGGCTCCCGAGCAGGCGACCGTCGAGGCGACGGCGGCGGAC------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------MDAVATAYLGGAVALIVGVAFVWLLYRSLDGSPHQSALAPLAIIPVFAGLSYVGMAYDIG--------------TVIVNGNQIVGLRYIDW--------LVTTPILVGYVGYA--------AGASR-RS------------IIG-VMVADALMIAVGAGAV---V----------------------------TD---G---------TLK------WAL-FGVSSIFHLSLFAYL-----Y--V-IFPRVVPDV-----PEQI---G-L-F-N-LL-KNHIGL---------------------LW---LAYPLVWLFGPAG------IGEATAAGVALTYVFLDVLAKVPYVYFFYARRRVFMHSESPPAPEQATVEATAAD---------------------------- [sensory-I]_AB009623 [sensory-I] Halorubrum_sodomense_AB009623 gi|4579719|gb|AB009623| Halorubrum sodomense sop gene for sensory rhodopsin, complete cds. Halorubrum sodomense sop gene for sensory rhodopsin, complete cds. AB009623 [[other rhodopsin/sensory rhodopsin I-like]] other rhodopsin sensory rhodopsin I-like sensory rhodopsin type I photosensor D97 ; F108 light-signal conversion (sensory) Green (L105) [Archaea/Euryarchaeota/Halobacteria/Halobacteriales/Halobacteriaceae/Halorubrum] taxon:35743 genomic DNA strain 12-MAY-2007 #na #na Dead Sea marine 31.5 35.49 Evolution of the archaeal rhodopsins: evolution rate changes by gene duplication and functional differentiation Ihara,K., Umemura,T., Katagiri,I., Kitajima-Ihara,T., Sugiyama,Y., Kimura,Y. and Mukohata,Y. J. Mol. Biol. 285 (1), 163-174 (1999) 9878396 #na ATGACCGGTGCCGTCACCAGTGCGTACTGGCTGGCGGCGGTCGCCTTCCTCATCGGAGTCGGGATCACCGCGGCGCTGTACGCGAAGCTGGAGGGGTCGAGGGCGCGCACGCGGCTGGCCGCGCTGGCCGTTATCCCCGGGTTCGCCGGACTCAGTTACGTCGGGATGGCGCTCGGGATCGGGACGGTCACGGTCAACGGGGCCGAACTCGTCGGCCTTCGCTACGTCGACTGGGTCGTCACCACGCCGCTCCTGGTCGGATTCATCGGGTACAACGCCGGCGCGTCGCGTCGCGCCATCGCCGGCGTGATGATCGCGGACGCGCTGATGATCGTGTTCGGTGCCGCCGCGGTCGTGAGCGGCGGGACGCTCAAGTGGGCGTTGTTCGGCGTCTCCGCGCTGTTCCACGTCTCGCTGTTCGCGTACCTGTACGTGATCTTCCCGGGAGGTATCCCCGACGACCCGATGCAACGGGGGCTGTTCAGCCTACTGAAGAACCACGTCGGGCTGCTGTGGCTCGCCTACCCGTTCGTCTGGCTGATGGGCCCGGCGGGTATCGGGTTCACCGGGGCGGTGGGCGCCGCGCTGACGTACGCCTTCCTCGACGTGTTGGCGAAGGTGCCGTACGTCTACTTCTTCTACGCCCGGCGGCAGGCGTTCATAGACGTGACGGACTCGCGGGCGGCGGCCAAAGGCGACGGTCCCGCAGTGGGCGGCGAGGCTCCCGTCGCGACCGGCGACGACGCCCCGACCGCGGCCGAC MTGAVTSAYWLAAVAFLIGVGITAALYAKLEGSRARTRLAALAVIPGFAGLSYVGMALGIGTVTVNGAELVGLRYVDWVVTTPLLVGFIGYNAGASRRAIAGVMIADALMIVFGAAAVVSGGTLKWALFGVSALFHVSLFAYLYVIFPGGIPDDPMQRGLFSLLKNHVGLLWLAYPFVWLMGPAGIGFTGAVGAALTYAFLDVLAKVPYVYFFYARRQAFIDVTDSRAAAKGDGPAVGGEAPVATGDDAPTAAD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGACCGGTGCCGTCACCAGTGCGTACTGGCTGGCGGCGGTCGCCTTCCTCATCGGAGTCGGGATCACCGCGGCGCTGTACGCGAAGCTGGAGGGGTCGAGGGCGCGCACGCGGCTGGCCGCGCTGGCCGTTATCCCCGGGTTCGCCGGACTCAGTTACGTCGGGATGGCGCTCGGGATCGGG------------------------------------------ACGGTCACGGTCAACGGGGCCGAACTCGTCGGCCTTCGCTACGTCGACTGG------------------------GTCGTCACCACGCCGCTCCTGGTCGGATTCATCGGGTACAAC------------------------GCCGGCGCGTCGCGT---CGCGCC------------------------------------ATCGCCGGC---GTGATGATCGCGGACGCGCTGATGATCGTGTTCGGTGCCGCCGCGGTC---------GTG------------------------------------------------------------------------------------AGCGGC---------GGG---------------------------ACGCTCAAG------------------TGGGCGTTG---TTCGGCGTCTCCGCGCTGTTCCACGTCTCGCTGTTCGCGTACCTG---------------TAC------GTG---ATCTTCCCGGGAGGTATCCCCGACGAC---------------CCGATGCAACGG---------GGG---CTG---TTC---AGC---CTACTG---AAGAACCACGTCGGGCTG---------------------------------------------------------------CTGTGG---------CTCGCCTACCCGTTCGTCTGGCTGATGGGCCCGGCGGGT------------------ATCGGGTTCACCGGGGCGGTGGGCGCCGCGCTGACGTACGCCTTCCTCGACGTGTTGGCGAAGGTGCCGTACGTCTACTTCTTCTACGCCCGGCGGCAGGCGTTCATAGACGTGACGGACTCGCGGGCGGCGGCCAAAGGCGACGGTCCCGCAGTGGGCGGCGAGGCTCCCGTCGCGACCGGCGACGACGCCCCGACCGCGGCCGAC------------------------------------------ -------------------------------------------------------------------------------------------------------------------------MTGAVTSAYWLAAVAFLIGVGITAALYAKLEGSRARTRLAALAVIPGFAGLSYVGMALGIG--------------TVTVNGAELVGLRYVDW--------VVTTPLLVGFIGYN--------AGASR-RA------------IAG-VMIADALMIVFGAAAV---V----------------------------SG---G---------TLK------WAL-FGVSALFHVSLFAYL-----Y--V-IFPGGIPDD-----PMQR---G-L-F-S-LL-KNHVGL---------------------LW---LAYPFVWLMGPAG------IGFTGAVGAALTYAFLDVLAKVPYVYFFYARRQAFIDVTDSRAAAKGDGPAVGGEAPVATGDDAPTAAD-------------- [sensory-I]_NC_007677 [sensory-I] 83814055_3120759_3121478_Salinibacter_ruber_DSM_13855_Sensory_Rhodopsin_I_genome gi|83814055|gb|NC_007677| Salinibacter ruber DSM 13855 chromosome, complete genome Salinibacter ruber DSM 13855 chromosome, complete genome NC_007677 [[other rhodopsin/sensory rhodopsin I-like]] other rhodopsin sensory rhodopsin I-like sensory rhodopsin type I photosensor D97 ; Y108 light-signal conversion (sensory) Green (L105) [Bacteria/Bacteroidetes/Bacteroidetes Order II. Incertae sedis/Rhodothermaceae/Salinibacter] taxon:309807 genomic_DNA strain 22-juil-13 #na #na Other terrestrial 39.7 3 #na #na #na #na #na ATGGACCCGATTACGATCGTCTACATCATCGGAACCCTTGGAATGCTCGTTGGGATTCCCCCTGCACTGTCGCTGGTCGGCGACGAGGTGGGACTCGACTTCGACTACGTCTGGGCCATTCCCGGAATTGCCGCGTTCATGTACCTGCTCATGACGTTCGACGTCGGGTCGGTGCAGTTTCAGGGGTATCATGTGCCCATCCCCCGGTATATTGATTGGGCCCTCACCACGCCCCTTCTCGTGGGGTACACCGCGTACATCGCCGGGGCCAGCCGGGGCATGATCGCGGGCACCGCCCTGGCCGACTTCATGATGATCGTGTTCGGCCTGGGGGCCGTCGTGTTTTCGTCCACGGCCCAGTGGGTGTTCTTCGGGCTGTCCTCGGCCTGCCACCTGACCCTCCTCGCGCTCCTCTACGGGCCGGTGCGCAACTCGGCGTTCGGAGAGCCGCCCTCCCACCGGCGGCTCGCGCGGCTCCTGCTGAACTACGTCGGGCTGCTCTGGCTCGCCTACCCGCTGGTGTGGCTCTTCGGGCCGGGCCTGCAGTGGGTCGACGCGGCGGGAATCGCGGTGATCATCAGCTACCTGGACGTGACCGCGAAGGTGCCGTTTGTCTACTTCATCTACCGGGCGCGCAAGAACTTTGTCAAGGTGACCGGCGGAGAGCCCGAGACCGCTTCTGGGCAGGGGGGGGCAGCGACAGTCACGTCTGCCGCC MDPITIVYIIGTLGMLVGIPPALSLVGDEVGLDFDYVWAIPGIAAFMYLLMTFDVGSVQFQGYHVPIPRYIDWALTTPLLVGYTAYIAGASRGMIAGTALADFMMIVFGLGAVVFSSTAQWVFFGLSSACHLTLLALLYGPVRNSAFGEPPSHRRLARLLLNYVGLLWLAYPLVWLFGPGLQWVDAAGIAVIISYLDVTAKVPFVYFIYRARKNFVKVTGGEPETASGQGGAATVTSAA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGACCCGATTACGATCGTCTACATCATCGGAACCCTTGGAATGCTCGTTGGGATTCCCCCTGCACTGTCGCTGGTCGGCGACGAGGTGGGACTCGACTTCGACTACGTCTGGGCCATTCCCGGAATTGCCGCGTTCATGTACCTGCTCATGACGTTCGACGTCGGG------------------------------------------TCGGTGCAGTTTCAGGGGTATCATGTGCCCATCCCCCGGTATATTGATTGG------------------------GCCCTCACCACGCCCCTTCTCGTGGGGTACACCGCGTACATC------------------------GCCGGGGCCAGCCGG---GGCATG------------------------------------ATCGCGGGC---ACCGCCCTGGCCGACTTCATGATGATCGTGTTCGGCCTGGGGGCCGTC---------GTG------------------------------------------------------------------------------------TTTTCG---------TCC---------------------------ACGGCCCAG------------------TGGGTGTTC---TTCGGGCTGTCCTCGGCCTGCCACCTGACCCTCCTCGCGCTCCTC---------------TAC------GGG---CCGGTGCGCAACTCGGCGTTCGGAGAG---------------CCGCCCTCCCAC---CGG---CGG---CTC---GCG---CGG---CTCCTG---CTGAACTACGTCGGGCTG---------------------------------------------------------------CTCTGG---------CTCGCCTACCCGCTGGTGTGGCTCTTCGGGCCGGGC---------------------CTGCAGTGGGTCGACGCGGCGGGAATCGCGGTGATCATCAGCTACCTGGACGTGACCGCGAAGGTGCCGTTTGTCTACTTCATCTACCGGGCGCGCAAGAACTTTGTCAAGGTGACCGGCGGAGAGCCCGAGACCGCTTCTGGGCAGGGGGGGGCAGCGACAGTCACGTCTGCCGCC------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------MDPITIVYIIGTLGMLVGIPPALSLVGDEVGLDFDYVWAIPGIAAFMYLLMTFDVG--------------SVQFQGYHVPIPRYIDW--------ALTTPLLVGYTAYI--------AGASR-GM------------IAG-TALADFMMIVFGLGAV---V----------------------------FS---S---------TAQ------WVF-FGLSSACHLTLLALL-----Y--G-PVRNSAFGE-----PPSH-R-R-L-A-R-LL-LNYVGL---------------------LW---LAYPLVWLFGPG-------LQWVDAAGIAVIISYLDVTAKVPFVYFIYRARKNFVKVTGGEPETASGQGGAATVTSAA------------------------ [IV-Alpha8-SAR11/IMCC9063]_KJ927946 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU020_705ba4320c2a88a0db63f8b840dd1a4d gb|KJ927946| PRGD_OTU020_705ba4320c2a88a0db63f8b840dd1a4d, putative proteorhodopsin gene, partial cds. PRGD_OTU020_705ba4320c2a88a0db63f8b840dd1a4d, putative proteorhodopsin gene, partial cds. KJ927946 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-23.5956, 69.0419) TTAATCACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTACGAAAAGTTGACACAAATATATTCTGGAGAATCTTAATCGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATTAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCTGGAGAAGCAGGAAAAGTTGCCGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTA LITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---CGAAAAGTTGACACA---AATATA------------------------------------TTCTGGAGA---ATCTTAATCGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCT---GGAGAAGCAGGAAAAGTTGCCGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ927962 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU020_e37b9c81180bfecc3d1ac3f1d82ec989 gb|KJ927962| PRGD_OTU020_e37b9c81180bfecc3d1ac3f1d82ec989, putative proteorhodopsin gene, partial cds. PRGD_OTU020_e37b9c81180bfecc3d1ac3f1d82ec989, putative proteorhodopsin gene, partial cds. KJ927962 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45; -33.28, 45.35) TTAATAACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTACGAAAAGTTGACACAAATATATTCTGGAGAATCTTAATTGGTTCGCTAGTTATGTTAATTGGTGGATATCTTGGAGAAGCTGGATTCATTAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAGGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTA LITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---CGAAAAGTTGACACA---AATATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCGCTAGTTATGTTAATTGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAGGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ927934 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU020_28642ea5db6afabe2e7bd792e33b09b6 gb|KJ927934| PRGD_OTU020_28642ea5db6afabe2e7bd792e33b09b6, putative proteorhodopsin gene, partial cds. PRGD_OTU020_28642ea5db6afabe2e7bd792e33b09b6, putative proteorhodopsin gene, partial cds. KJ927934 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTAATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATTAACGCTACACTAGGTTTTATAATTGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGTGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTA LITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTAATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTTATAATTGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGTGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ927966 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU020_f18bc0809032d217665310b418dbe542 gb|KJ927966| PRGD_OTU020_f18bc0809032d217665310b418dbe542, putative proteorhodopsin gene, partial cds. PRGD_OTU020_f18bc0809032d217665310b418dbe542, putative proteorhodopsin gene, partial cds. KJ927966 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) TTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACCAACATATTCTGGAGAATCTTAATTGGTTCCCTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATTAATGCTACGCTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTA LITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACC---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCCCTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACGCTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ927927 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU020_otuREP_6874a6fc5f75e7fbe835a0da45c8949b gb|KJ927927| PRGD_OTU020_otuREP_6874a6fc5f75e7fbe835a0da45c8949b, putative proteorhodopsin gene, partial cds. PRGD_OTU020_otuREP_6874a6fc5f75e7fbe835a0da45c8949b, putative proteorhodopsin gene, partial cds. KJ927927 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (73.9992, 19.2097), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTACGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATTAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTA LITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---CGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ927969 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU020_fc1d2e2209ef2e3f02e1875769105876 gb|KJ927969| PRGD_OTU020_fc1d2e2209ef2e3f02e1875769105876, putative proteorhodopsin gene, partial cds. PRGD_OTU020_fc1d2e2209ef2e3f02e1875769105876, putative proteorhodopsin gene, partial cds. KJ927969 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATCACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTACGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTGGTAATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATTAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTA LITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---CGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTGGTAATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ927968 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU020_f439f4b98c6c4cd35953e5cd38021e7e gb|KJ927968| PRGD_OTU020_f439f4b98c6c4cd35953e5cd38021e7e, putative proteorhodopsin gene, partial cds. PRGD_OTU020_f439f4b98c6c4cd35953e5cd38021e7e, putative proteorhodopsin gene, partial cds. KJ927968 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTACGAAAAGTTGACACAAACATATTTTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATTAACGCTACGCTTGGTTTCATAATCGGTATGGCTGGATGGATTTATATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTA LITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---CGAAAAGTTGACACA---AACATA------------------------------------TTTTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACGCTTGGT---TTCATAATCGGTATGGCTGGATGGATTTATATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ927931 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU020_1174f2a342b3e05a8c6f4553a5458111 gb|KJ927931| PRGD_OTU020_1174f2a342b3e05a8c6f4553a5458111, putative proteorhodopsin gene, partial cds. PRGD_OTU020_1174f2a342b3e05a8c6f4553a5458111, putative proteorhodopsin gene, partial cds. KJ927931 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTACGTAAAGTAGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGCTTCATCAATGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTA LITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---CGTAAAGTAGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ927944 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU020_615c2a10b3bfb84b23730eab4d8be45f gb|KJ927944| PRGD_OTU020_615c2a10b3bfb84b23730eab4d8be45f, putative proteorhodopsin gene, partial cds. PRGD_OTU020_615c2a10b3bfb84b23730eab4d8be45f, putative proteorhodopsin gene, partial cds. KJ927944 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Atlantic side (73.9992, 19.2097) TTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCGGTACGAAAAGTTGACACCAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATTAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTATATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTA LITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCG---------GTA---CGAAAAGTTGACACC---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTATATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ927947 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU020_70f7600ae3470422bc318cda89fc55a4 gb|KJ927947| PRGD_OTU020_70f7600ae3470422bc318cda89fc55a4, putative proteorhodopsin gene, partial cds. PRGD_OTU020_70f7600ae3470422bc318cda89fc55a4, putative proteorhodopsin gene, partial cds. KJ927947 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.935 18.508 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Mediterranean Sea (33.935, 18.508), Indian Ocean (-33.28, 45.35) TTAATAACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTACGAAAAGTAGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGGGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTA LITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---CGAAAAGTAGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGGGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ927928 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU020_0715c60ec8da3b42a65339f489b6bfd5 gb|KJ927928| PRGD_OTU020_0715c60ec8da3b42a65339f489b6bfd5, putative proteorhodopsin gene, partial cds. PRGD_OTU020_0715c60ec8da3b42a65339f489b6bfd5, putative proteorhodopsin gene, partial cds. KJ927928 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) TTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGATACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAGGCTGGATTCATCAACGCTACACTAGGTTTTATAATCGGTATGGCTGGATGGATTTATATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTA LITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGATACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAG---------GCT------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTTATAATCGGTATGGCTGGATGGATTTATATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ927955 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU020_975ee2b16ce1e4606f49d667ad116b79 gb|KJ927955| PRGD_OTU020_975ee2b16ce1e4606f49d667ad116b79, putative proteorhodopsin gene, partial cds. PRGD_OTU020_975ee2b16ce1e4606f49d667ad116b79, putative proteorhodopsin gene, partial cds. KJ927955 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Mediterranean Sea (33.935, 18.508), Indian Ocean (-33.28, 45.35) TTAATAACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACCAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTGGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTA LITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACC---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTG---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ927961 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU020_e10bac43f189e1d3a93b7e1f086419ae gb|KJ927961| PRGD_OTU020_e10bac43f189e1d3a93b7e1f086419ae, putative proteorhodopsin gene, partial cds. PRGD_OTU020_e10bac43f189e1d3a93b7e1f086419ae, putative proteorhodopsin gene, partial cds. KJ927961 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATTAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGCAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTGACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTA LITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGCAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTG---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ927967 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU020_f3ff798e2973eb1fc06059eb2f05f9e5 gb|KJ927967| PRGD_OTU020_f3ff798e2973eb1fc06059eb2f05f9e5, putative proteorhodopsin gene, partial cds. PRGD_OTU020_f3ff798e2973eb1fc06059eb2f05f9e5, putative proteorhodopsin gene, partial cds. KJ927967 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Arctic Ocean-Pacific side (69.5142, -133.4185), Mediterranean Sea (33.762, 29.175), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTAATAACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCGGCAGTACGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGTGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTGACTGCATTTGGAGCATTAAGAATGATTGTTACTGTA LITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACTGTACCACTACAGCTAGTAGAATTTTACTTAATTCTTTCGGCA---------GTA---CGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGTGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTG---ACT---GCA---TTT---GGA---GCATTA---AGAATGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ927939 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU020_3dd60c23c7c74a1b246436b38390c1bc gb|KJ927939| PRGD_OTU020_3dd60c23c7c74a1b246436b38390c1bc, putative proteorhodopsin gene, partial cds. PRGD_OTU020_3dd60c23c7c74a1b246436b38390c1bc, putative proteorhodopsin gene, partial cds. KJ927939 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175) TTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCAGGATTCATCAACGCTACACTAGGTTTCATTATCGGTATGGCTGGATGGATTTACATTCTCTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAATAAATCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTA LITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCACTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCA------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATTATCGGTATGGCTGGATGGATTTACATTCTCTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAATAAATCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ927932 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU020_14160bb9e1a3ee940c95f70bd4730c15 gb|KJ927932| PRGD_OTU020_14160bb9e1a3ee940c95f70bd4730c15, putative proteorhodopsin gene, partial cds. PRGD_OTU020_14160bb9e1a3ee940c95f70bd4730c15, putative proteorhodopsin gene, partial cds. KJ927932 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Mediterranean Sea (33.762, 29.175), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATTACTGTACCGCTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACACAAACATATTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCAGGATTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAACAAAGCTTTAGTAACTGCATTTGGAGCTTTAAGAATGATTGTTACTGTA LITVPLQLVEFYLILSAVRKVDTNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKALVTAFGALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCGCTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACACA---AACATA------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCA------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAACAAAGCTTTA---GTA---ACT---GCA---TTT---GGA---GCTTTA---AGAATGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQLVEFYLILSA---V-RKVDT-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKAL-V-T-A-F-G-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ927965 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU020_efa0134593a481ae85362c1e352401bf gb|KJ927965| PRGD_OTU020_efa0134593a481ae85362c1e352401bf, putative proteorhodopsin gene, partial cds. PRGD_OTU020_efa0134593a481ae85362c1e352401bf, putative proteorhodopsin gene, partial cds. KJ927965 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) TTAATTACTGTACCTTTACAGCTAGTAGAATTTTATCTAATTCTTTCAGCAGTAAGAAAAGTTGATAGTAACATTTTCTGGAGAATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAAGCAGGATTCATCAACGCTACACTAGGTTTCATAATCGGTATGGCAGGATGGATTTACATTCTTTATGAAATCTTTTCAGGAGAGGCAGGAAAAGTTGCTGCTAAATCTGGAAACAAAGCACTAGTAACAGCATTTGGAGCATTAAGAATGATTGTTACTGTG LITVPLQLVEFYLILSAVRKVDSNIFWRILIGSLVMLIGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKVAAKSGNKALVTAFGALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCTTTACAGCTAGTAGAATTTTATCTAATTCTTTCAGCA---------GTA---AGAAAAGTTGATAGT---AACATT------------------------------------TTCTGGAGA---ATCTTAATTGGTTCACTAGTTATGTTAATAGGTGGATATCTTGGAGAA---------GCA------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATAATCGGTATGGCAGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGAGAGGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAACAAAGCACTA---GTA---ACA---GCA---TTT---GGA---GCATTA---AGAATGATTGTTACTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQLVEFYLILSA---V-RKVDS-NI------------FWR-ILIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKAL-V-T-A-F-G-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ927937 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU020_34079c936ee317c1a2fa7a6890abef82 gb|KJ927937| PRGD_OTU020_34079c936ee317c1a2fa7a6890abef82, putative proteorhodopsin gene, partial cds. PRGD_OTU020_34079c936ee317c1a2fa7a6890abef82, putative proteorhodopsin gene, partial cds. KJ927937 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTTCCTTTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACAGCGGAATATTCTGGAGAATCTTTATTGGTTCTTTAGTAATGTTAGTAGGTGGATATCTTGGAGAAGCTGGATTCATTAATGCTACACTTGGTTTTATTATCGGTATAGCTGGATGGGTTTATATTCTTTATGAAATCTTTTCAGGAGAAGCTGGAAAAGTTGCAGCTAAATCTGGAAACAAATCTCTAGTAACAGCATTCGGAGCTTTAAGAATGATCGTTACTGTA LITVPLQLVEFYLILSAVRKVDSGIFWRIFIGSLVMLVGGYLGEAGFINATLGFIIGIAGWVYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCTTTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACAGC---GGAATA------------------------------------TTCTGGAGA---ATCTTTATTGGTTCTTTAGTAATGTTAGTAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTATTATCGGTATAGCTGGATGGGTTTATATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCTGGAAAAGTTGCAGCTAAA------TCT---GGAAACAAATCTCTA---GTA---ACA---GCA---TTC---GGA---GCTTTA---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQLVEFYLILSA---V-RKVDS-GI------------FWR-IFIGSLVMLVGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGIAGWVYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ927951 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU020_83f21ff5539f6033c846c217773436f5 gb|KJ927951| PRGD_OTU020_83f21ff5539f6033c846c217773436f5, putative proteorhodopsin gene, partial cds. PRGD_OTU020_83f21ff5539f6033c846c217773436f5, putative proteorhodopsin gene, partial cds. KJ927951 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTTCCTTTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCAGTAAGAAAAGTTGACAGTGGAATATTCTGGAGGATCTTTATTGGTTCTTTAGTAATGTTAATAGGTGGATATCTTGGAGAAGCTGGATTCATTAATGCTACACTTGGTTTTATTATCGGTATAGCTGGATGGGTTTATATTCTTTATGAAATCTTTTCAGGAGAAGCTGGAAAAGTTGCAGCTAAATCTGGAAACAAATCTCTAGTAACAGCATTCGGAGCTTTAAGAATGATCGTTACTGTA LITVPLQLVEFYLILSAVRKVDSGIFWRIFIGSLVMLIGGYLGEAGFINATLGFIIGIAGWVYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCTTTACAGCTAGTAGAATTTTACTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACAGT---GGAATA------------------------------------TTCTGGAGG---ATCTTTATTGGTTCTTTAGTAATGTTAATAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTATTATCGGTATAGCTGGATGGGTTTATATTCTTTATGAAATC---------------TTT------TCA---GGAGAAGCTGGAAAAGTTGCAGCTAAA------TCT---GGAAACAAATCTCTA---GTA---ACA---GCA---TTC---GGA---GCTTTA---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQLVEFYLILSA---V-RKVDS-GI------------FWR-IFIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGIAGWVYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ927956 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU020_9b8cbd586ff43a55bab7c8855869fcde gb|KJ927956| PRGD_OTU020_9b8cbd586ff43a55bab7c8855869fcde, putative proteorhodopsin gene, partial cds. PRGD_OTU020_9b8cbd586ff43a55bab7c8855869fcde, putative proteorhodopsin gene, partial cds. KJ927956 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATTACAGTTCCTTTACAGCTAGTAGAATTTTATCTAATTCTTTCAGCAGTAAGAAAAGTTGACAGTGGCATTTTCTGGAGAATCTTTATTGGTTCTTTAGTAATGTTAGTTGGTGGATATCTTGGAGAAGCTGGATTCATTAATGCTACACTTGGTTTTATTATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCAGGTGAAGCGGGCAAAGCTGCAGCTAAATCTGGAAACAAATCTTTAGTAACTGCATTCGGAGCATTAAGAATGATCGTTACTGTA LITVPLQLVEFYLILSAVRKVDSGIFWRIFIGSLVMLVGGYLGEAGFINATLGFIIGMAGWIYILYEIFSGEAGKAAAKSGNKSLVTAFGALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCTTTACAGCTAGTAGAATTTTATCTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACAGT---GGCATT------------------------------------TTCTGGAGA---ATCTTTATTGGTTCTTTAGTAATGTTAGTTGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTATTATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCA---GGTGAAGCGGGCAAAGCTGCAGCTAAA------TCT---GGAAACAAATCTTTA---GTA---ACT---GCA---TTC---GGA---GCATTA---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQLVEFYLILSA---V-RKVDS-GI------------FWR-IFIGSLVMLVGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ927941 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU020_58cd4bf48ee8be3f0dfce71b15d6ae92 gb|KJ927941| PRGD_OTU020_58cd4bf48ee8be3f0dfce71b15d6ae92, putative proteorhodopsin gene, partial cds. PRGD_OTU020_58cd4bf48ee8be3f0dfce71b15d6ae92, putative proteorhodopsin gene, partial cds. KJ927941 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTTCCATTACAGCTTGTAGAATTTTATTTAATTCTTTCAGCAGTAAGAAAAGTTGACAGCGGAATATTCTGGAGAATCTTTATTGGTTCTTTAGTAATGTTAGTAGGTGGATATCTTGGAGAAGCTGGATTCATTAATGCTACACTTGGTTTCATAATCGGTATAGCTGGATGGGTTTACATTCTTTATGAAATCTTTTCAGGTGAAGCAGGAAAAGTTGCTGCTAAATCTGGAAACAAATCTTTAGTAACAGCATTCGGTGCATTAAGAATGATCGTTACTGTA LITVPLQLVEFYLILSAVRKVDSGIFWRIFIGSLVMLVGGYLGEAGFINATLGFIIGIAGWVYILYEIFSGEAGKVAAKSGNKSLVTAFGALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTACAGCTTGTAGAATTTTATTTAATTCTTTCAGCA---------GTA---AGAAAAGTTGACAGC---GGAATA------------------------------------TTCTGGAGA---ATCTTTATTGGTTCTTTAGTAATGTTAGTAGGTGGATATCTTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATAATCGGTATAGCTGGATGGGTTTACATTCTTTATGAAATC---------------TTT------TCA---GGTGAAGCAGGAAAAGTTGCTGCTAAA------TCT---GGAAACAAATCTTTA---GTA---ACA---GCA---TTC---GGT---GCATTA---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQLVEFYLILSA---V-RKVDS-GI------------FWR-IFIGSLVMLVGGYLGE---A------G--F-----------I----------------------NA------TLG-FIIGIAGWVYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-G-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ927935 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU020_2d04fb066b8802073ee26d2cb7647ccf gb|KJ927935| PRGD_OTU020_2d04fb066b8802073ee26d2cb7647ccf, putative proteorhodopsin gene, partial cds. PRGD_OTU020_2d04fb066b8802073ee26d2cb7647ccf, putative proteorhodopsin gene, partial cds. KJ927935 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATTACTGTACCACTACAGTTAGTAGAATTTTATCTAATTCTATCTGCAGTTAAGAAAGTACCAACAGGAATATTCTGGAGAATTTTAATCGGTTCTTTAGTAATGTTAATTGGTGGTTATCTTGGAGAAGCAGGAATGATAAACGCTACTCTTGGTTTTGTAATCGGAATGGCTGGATGGATTTACATTTTATATGAAATCTTTTCTGGTGAAGCAGGTAAAGTTGCTGCTAAATCTGGTAACAAATCATTAGTAACTGCATTCAGCGCTTTAAGAATGATCGTTACTGTA LITVPLQLVEFYLILSAVKKVPTGIFWRILIGSLVMLIGGYLGEAGMINATLGFVIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFSALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCACTACAGTTAGTAGAATTTTATCTAATTCTATCTGCA---------GTT---AAGAAAGTACCAACA---GGAATA------------------------------------TTCTGGAGA---ATTTTAATCGGTTCTTTAGTAATGTTAATTGGTGGTTATCTTGGAGAA---------GCA------------------GGA------ATG---------------------------------ATA------------------------------------------------------------------AACGCT------------------ACTCTTGGT---TTTGTAATCGGAATGGCTGGATGGATTTACATTTTATATGAAATC---------------TTT------TCT---GGTGAAGCAGGTAAAGTTGCTGCTAAA------TCT---GGTAACAAATCATTA---GTA---ACT---GCA---TTC---AGC---GCTTTA---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQLVEFYLILSA---V-KKVPT-GI------------FWR-ILIGSLVMLIGGYLGE---A------G--M-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-S-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ927945 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU020_63347700236ab9f45cf85131bdf90ea3 gb|KJ927945| PRGD_OTU020_63347700236ab9f45cf85131bdf90ea3, putative proteorhodopsin gene, partial cds. PRGD_OTU020_63347700236ab9f45cf85131bdf90ea3, putative proteorhodopsin gene, partial cds. KJ927945 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTAATTACTGTACCACTACAGTTAGTAGAATTTTATCTAATTCTATCTGCAGTGAAGAAAGTGCCAACAGGCATATTCTGGAGAATTTTAATCGGTTCTTTAGTAATGTTAGTTGGTGGTTATCTTGGAGAAGCAGGAATGATAAATGCTACTCTTGGTTTTGTAATCGGAATGGCTGGATGGATTTACATTTTATATGAAATCTTTTCTGGTGAAGCAGGTAAAGTTGCTGCTAAATCTGGTAACAAATCATTAGTGACAGCATTCAGCGCTTTAAGAATGATCGTTACTGTA LITVPLQLVEFYLILSAVKKVPTGIFWRILIGSLVMLVGGYLGEAGMINATLGFVIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFSALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCACTACAGTTAGTAGAATTTTATCTAATTCTATCTGCA---------GTG---AAGAAAGTGCCAACA---GGCATA------------------------------------TTCTGGAGA---ATTTTAATCGGTTCTTTAGTAATGTTAGTTGGTGGTTATCTTGGAGAA---------GCA------------------GGA------ATG---------------------------------ATA------------------------------------------------------------------AATGCT------------------ACTCTTGGT---TTTGTAATCGGAATGGCTGGATGGATTTACATTTTATATGAAATC---------------TTT------TCT---GGTGAAGCAGGTAAAGTTGCTGCTAAA------TCT---GGTAACAAATCATTA---GTG---ACA---GCA---TTC---AGC---GCTTTA---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQLVEFYLILSA---V-KKVPT-GI------------FWR-ILIGSLVMLVGGYLGE---A------G--M-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-S-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ927938 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU020_34f244efb71cfe628145c1821a2f841a gb|KJ927938| PRGD_OTU020_34f244efb71cfe628145c1821a2f841a, putative proteorhodopsin gene, partial cds. PRGD_OTU020_34f244efb71cfe628145c1821a2f841a, putative proteorhodopsin gene, partial cds. KJ927938 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), English Channel (48.7717, -3.9683) TTAATTACTGTACCGCTACAGTTAGTAGAATTTTATCTAATTCTATCTGCAGTTAAGAAAGTACCAACAGGTATATTCTGGAGAATTTTAATCGGTTCTTTAGTTATGTTAGTTGGTGGTTATCTTGGAGAAGCAGGAATGATAAATGCTACTCTAGGTTTTGTAATCGGAATGGCTGGATGGATTTATATTTTATATGAAATCTTTTCTGGTGAAGCAGGTAAAGTTGCTGCTAAATCTGGTAACAAATCATTAGTAACAGCATTCAGTGCTTTAAGAATGATCGTTACTGTA LITVPLQLVEFYLILSAVKKVPTGIFWRILIGSLVMLVGGYLGEAGMINATLGFVIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFSALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCGCTACAGTTAGTAGAATTTTATCTAATTCTATCTGCA---------GTT---AAGAAAGTACCAACA---GGTATA------------------------------------TTCTGGAGA---ATTTTAATCGGTTCTTTAGTTATGTTAGTTGGTGGTTATCTTGGAGAA---------GCA------------------GGA------ATG---------------------------------ATA------------------------------------------------------------------AATGCT------------------ACTCTAGGT---TTTGTAATCGGAATGGCTGGATGGATTTATATTTTATATGAAATC---------------TTT------TCT---GGTGAAGCAGGTAAAGTTGCTGCTAAA------TCT---GGTAACAAATCATTA---GTA---ACA---GCA---TTC---AGT---GCTTTA---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQLVEFYLILSA---V-KKVPT-GI------------FWR-ILIGSLVMLVGGYLGE---A------G--M-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-S-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ927959 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU020_d379e5ccffddf701684a3d0fd759804c gb|KJ927959| PRGD_OTU020_d379e5ccffddf701684a3d0fd759804c, putative proteorhodopsin gene, partial cds. PRGD_OTU020_d379e5ccffddf701684a3d0fd759804c, putative proteorhodopsin gene, partial cds. KJ927959 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), Arctic Ocean-Pacific side (72.0542, -130.8781), Indian Ocean (-23.5956, 69.0419) TTAATTACTGTACCACTACAGTTAGTAGAATTTTATCTAATTCTATCTGCAGTTAAGAAAGTGCCAACAGGTATATTCTGGAGAATTTTAATAGGTTCTTTAGTTATGTTAGTTGGTGGTTATCTTGGAGAAGCAGGAATGATAAATGCTACTCTTGGTTTCGTAATCGGAATGGCTGGATGGATTTACATTTTATATGAAATCTTTTCTGGTGAAGCAGGTAAAGTTGCTGCTAAATCTGGTAACAAATCATTAGTTACAGCATTCAGCGCTCTAAGAATGATCGTTACTGTA LITVPLQLVEFYLILSAVKKVPTGIFWRILIGSLVMLVGGYLGEAGMINATLGFVIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFSALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCACTACAGTTAGTAGAATTTTATCTAATTCTATCTGCA---------GTT---AAGAAAGTGCCAACA---GGTATA------------------------------------TTCTGGAGA---ATTTTAATAGGTTCTTTAGTTATGTTAGTTGGTGGTTATCTTGGAGAA---------GCA------------------GGA------ATG---------------------------------ATA------------------------------------------------------------------AATGCT------------------ACTCTTGGT---TTCGTAATCGGAATGGCTGGATGGATTTACATTTTATATGAAATC---------------TTT------TCT---GGTGAAGCAGGTAAAGTTGCTGCTAAA------TCT---GGTAACAAATCATTA---GTT---ACA---GCA---TTC---AGC---GCTCTA---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQLVEFYLILSA---V-KKVPT-GI------------FWR-ILIGSLVMLVGGYLGE---A------G--M-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-S-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ927940 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU020_4c097c60b0c7298b92c6fce0d3f3440b gb|KJ927940| PRGD_OTU020_4c097c60b0c7298b92c6fce0d3f3440b, putative proteorhodopsin gene, partial cds. PRGD_OTU020_4c097c60b0c7298b92c6fce0d3f3440b, putative proteorhodopsin gene, partial cds. KJ927940 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTAATTACTGTACCACTACAGTTAGTAGAATTTTATCTAATTCTATCTGCAGTTAAAAAAGTACCAACAGGAATATTCTGGAGAATTTTAATAGGTTCTTTAGTTATGTTAGTTGGTGGTTATCTTGGAGAAGCAGGAATGATAAATGCTACTCTTGGTTTCGTAATCGGAATGGCTGGATGGATTTACATTTTATATGAAATCTTTTCTGGTGAAGCAGGTAAAGTTGCTGCTAAATCTGGTAATAAATCATTAGTAACAGCATTCAGCGCTTTAAGAATGATCGTTACTGTA LITVPLQLVEFYLILSAVKKVPTGIFWRILIGSLVMLVGGYLGEAGMINATLGFVIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFSALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCACTACAGTTAGTAGAATTTTATCTAATTCTATCTGCA---------GTT---AAAAAAGTACCAACA---GGAATA------------------------------------TTCTGGAGA---ATTTTAATAGGTTCTTTAGTTATGTTAGTTGGTGGTTATCTTGGAGAA---------GCA------------------GGA------ATG---------------------------------ATA------------------------------------------------------------------AATGCT------------------ACTCTTGGT---TTCGTAATCGGAATGGCTGGATGGATTTACATTTTATATGAAATC---------------TTT------TCT---GGTGAAGCAGGTAAAGTTGCTGCTAAA------TCT---GGTAATAAATCATTA---GTA---ACA---GCA---TTC---AGC---GCTTTA---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQLVEFYLILSA---V-KKVPT-GI------------FWR-ILIGSLVMLVGGYLGE---A------G--M-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-S-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ927936 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU020_30bdcbdbfe029e2fcffacf32067e942d gb|KJ927936| PRGD_OTU020_30bdcbdbfe029e2fcffacf32067e942d, putative proteorhodopsin gene, partial cds. PRGD_OTU020_30bdcbdbfe029e2fcffacf32067e942d, putative proteorhodopsin gene, partial cds. KJ927936 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Mediterranean Sea (33.762, 29.175), Indian Ocean (-23.5956, 69.0419) TTAATTACTGTACCACTACAGTTAGTAGAATTTTATCTAATTCTATCTGCAGTTAAAAAAGTGCCAACTGGAATATTCTGGAGAATTTTAATAGGTTCTTTAGTTATGTTAGTTGGTGGTTATCTTGGAGAAGCGGGAATGATAAACGCTACTCTTGGTTTCGTAATCGGAATGGCTGGATGGATTTACATTTTATATGAAATCTTTTCTGGTGAAGCAGGTAAAGTTGCTGCTAAATCTGGTAACAAATCATTAGTAACAGCATTCAGCGCCTTAAGAATGATCGTTACTGTA LITVPLQLVEFYLILSAVKKVPTGIFWRILIGSLVMLVGGYLGEAGMINATLGFVIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFSALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCACTACAGTTAGTAGAATTTTATCTAATTCTATCTGCA---------GTT---AAAAAAGTGCCAACT---GGAATA------------------------------------TTCTGGAGA---ATTTTAATAGGTTCTTTAGTTATGTTAGTTGGTGGTTATCTTGGAGAA---------GCG------------------GGA------ATG---------------------------------ATA------------------------------------------------------------------AACGCT------------------ACTCTTGGT---TTCGTAATCGGAATGGCTGGATGGATTTACATTTTATATGAAATC---------------TTT------TCT---GGTGAAGCAGGTAAAGTTGCTGCTAAA------TCT---GGTAACAAATCATTA---GTA---ACA---GCA---TTC---AGC---GCCTTA---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQLVEFYLILSA---V-KKVPT-GI------------FWR-ILIGSLVMLVGGYLGE---A------G--M-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-S-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ927958 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU020_c2a03f5a7274ac8ac164905ba75b00d5 gb|KJ927958| PRGD_OTU020_c2a03f5a7274ac8ac164905ba75b00d5, putative proteorhodopsin gene, partial cds. PRGD_OTU020_c2a03f5a7274ac8ac164905ba75b00d5, putative proteorhodopsin gene, partial cds. KJ927958 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTAATTACTGTACCACTACAGTTAGTAGAATTTTATCTAATTCTATCTGCAGTTAAGAAAGTACCAACAGGAATATTCTGGAGAATTTTAATAGGTTCTTTAGTTATGCTAGTTGGTGGGTATCTTGGAGAAGCAGGAATGATAAATGCTACTCTTGGTTTTGTAATCGGAATGGCTGGATGGATTTACATTTTATATGAAATCTTTTCTGGTGAAGCAGGCAAAGTTGCCGCTAAATCTGGTAACAAATCATTAGTAACAGCATTCAGCGCTTTGAGAATGATCGTTACTGTA LITVPLQLVEFYLILSAVKKVPTGIFWRILIGSLVMLVGGYLGEAGMINATLGFVIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFSALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCACTACAGTTAGTAGAATTTTATCTAATTCTATCTGCA---------GTT---AAGAAAGTACCAACA---GGAATA------------------------------------TTCTGGAGA---ATTTTAATAGGTTCTTTAGTTATGCTAGTTGGTGGGTATCTTGGAGAA---------GCA------------------GGA------ATG---------------------------------ATA------------------------------------------------------------------AATGCT------------------ACTCTTGGT---TTTGTAATCGGAATGGCTGGATGGATTTACATTTTATATGAAATC---------------TTT------TCT---GGTGAAGCAGGCAAAGTTGCCGCTAAA------TCT---GGTAACAAATCATTA---GTA---ACA---GCA---TTC---AGC---GCTTTG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQLVEFYLILSA---V-KKVPT-GI------------FWR-ILIGSLVMLVGGYLGE---A------G--M-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-S-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ927964 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU020_ecc8727e27b22ba3144d0e6ec3b0b0d6 gb|KJ927964| PRGD_OTU020_ecc8727e27b22ba3144d0e6ec3b0b0d6, putative proteorhodopsin gene, partial cds. PRGD_OTU020_ecc8727e27b22ba3144d0e6ec3b0b0d6, putative proteorhodopsin gene, partial cds. KJ927964 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTAATTACGGTACCACTACAGTTAGTAGAATTTTATCTAATTCTATCTGCAGTTAAGAAAGTACCAACAGGAATATTCTGGAGAATTTTAATAGGTTCTTTAGTTATGTTAGTTGGTGGTTATCTTGGAGAAGCAGGAATGATAAACGCTACTCTTGGTTTCGTAATCGGAATGGCTGGATGGATTTACATTTTATATGAAATCTTTTCTGGTGAAGCAGGCAAAGTTGCTGCTAAATCTGGTAACAAATCATTAGTGACAGCATTCAGCGCTTTAAGAATGATCGTTACTGTA LITVPLQLVEFYLILSAVKKVPTGIFWRILIGSLVMLVGGYLGEAGMINATLGFVIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFSALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACGGTACCACTACAGTTAGTAGAATTTTATCTAATTCTATCTGCA---------GTT---AAGAAAGTACCAACA---GGAATA------------------------------------TTCTGGAGA---ATTTTAATAGGTTCTTTAGTTATGTTAGTTGGTGGTTATCTTGGAGAA---------GCA------------------GGA------ATG---------------------------------ATA------------------------------------------------------------------AACGCT------------------ACTCTTGGT---TTCGTAATCGGAATGGCTGGATGGATTTACATTTTATATGAAATC---------------TTT------TCT---GGTGAAGCAGGCAAAGTTGCTGCTAAA------TCT---GGTAACAAATCATTA---GTG---ACA---GCA---TTC---AGC---GCTTTA---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQLVEFYLILSA---V-KKVPT-GI------------FWR-ILIGSLVMLVGGYLGE---A------G--M-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-S-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ927930 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU020_10ec64e90ccb345118661d3516c9d85e gb|KJ927930| PRGD_OTU020_10ec64e90ccb345118661d3516c9d85e, putative proteorhodopsin gene, partial cds. PRGD_OTU020_10ec64e90ccb345118661d3516c9d85e, putative proteorhodopsin gene, partial cds. KJ927930 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTAATTACTGTACCACTACAGTTAGTAGAATTTTATCTAATTCTATCTGCAGTTAAGAAAGTGCCAACAGGAATATTCTGGAGAATTTTAATCGGTTCTTTAGTTATGTTAGTTGGTGGTTATCTTGGAGAAGCAGGAATGATAAATGCTACTCTTGGTTTTGTAATCGGAATGGCTGGATGGATTTACATCTTATATGAAATCTTTTCTGGTGAAGCAGGTAAAGTTGCTGCTAAATCTGGTAACAAATCATTAGTAACAGCATTCAGCGCTTTAAGAATGATCGTTACTGTA LITVPLQLVEFYLILSAVKKVPTGIFWRILIGSLVMLVGGYLGEAGMINATLGFVIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFSALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCACTACAGTTAGTAGAATTTTATCTAATTCTATCTGCA---------GTT---AAGAAAGTGCCAACA---GGAATA------------------------------------TTCTGGAGA---ATTTTAATCGGTTCTTTAGTTATGTTAGTTGGTGGTTATCTTGGAGAA---------GCA------------------GGA------ATG---------------------------------ATA------------------------------------------------------------------AATGCT------------------ACTCTTGGT---TTTGTAATCGGAATGGCTGGATGGATTTACATCTTATATGAAATC---------------TTT------TCT---GGTGAAGCAGGTAAAGTTGCTGCTAAA------TCT---GGTAACAAATCATTA---GTA---ACA---GCA---TTC---AGC---GCTTTA---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQLVEFYLILSA---V-KKVPT-GI------------FWR-ILIGSLVMLVGGYLGE---A------G--M-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-S-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ927929 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU020_0b49711b28beca00cebee64403ee29e6 gb|KJ927929| PRGD_OTU020_0b49711b28beca00cebee64403ee29e6, putative proteorhodopsin gene, partial cds. PRGD_OTU020_0b49711b28beca00cebee64403ee29e6, putative proteorhodopsin gene, partial cds. KJ927929 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) TTAATTACTGTACCACTACAGTTAGTAGAATTTTATCTAATTCTATCTGCAGTTAAAAAAGTACCAACAGGAATATTCTGGAGAATTTTAATCGGTTCTTTAGTGATGTTAGTTGGTGGTTATCTTGGAGAAGCAGGAATGATAAATGCTACTCTTGGTTTTGTAATCGGAATGGCAGGATGGATTTACATCTTATATGAAATCTTTTCTGGCGAAGCAGGTAAAGTTGCTGCTAAATCTGGTAACAAGTCATTAGTAACAGCATTTAGCGCTTTAAGAATGATCGTTACTGTA LITVPLQLVEFYLILSAVKKVPTGIFWRILIGSLVMLVGGYLGEAGMINATLGFVIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFSALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCACTACAGTTAGTAGAATTTTATCTAATTCTATCTGCA---------GTT---AAAAAAGTACCAACA---GGAATA------------------------------------TTCTGGAGA---ATTTTAATCGGTTCTTTAGTGATGTTAGTTGGTGGTTATCTTGGAGAA---------GCA------------------GGA------ATG---------------------------------ATA------------------------------------------------------------------AATGCT------------------ACTCTTGGT---TTTGTAATCGGAATGGCAGGATGGATTTACATCTTATATGAAATC---------------TTT------TCT---GGCGAAGCAGGTAAAGTTGCTGCTAAA------TCT---GGTAACAAGTCATTA---GTA---ACA---GCA---TTT---AGC---GCTTTA---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQLVEFYLILSA---V-KKVPT-GI------------FWR-ILIGSLVMLVGGYLGE---A------G--M-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-S-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ927950 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU020_812119d6632e15e2c2553008d66b7145 gb|KJ927950| PRGD_OTU020_812119d6632e15e2c2553008d66b7145, putative proteorhodopsin gene, partial cds. PRGD_OTU020_812119d6632e15e2c2553008d66b7145, putative proteorhodopsin gene, partial cds. KJ927950 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) TTAATTACTGTACCACTACAGTTAGTAGAATTTTATTTAATTCTATCTGCAGTTAAAAAAGTACCAACAGGAATATTCTGGAGAATTTTAATCGGTTCTTTAGTAATGTTAGTAGGTGGTTATCTTGGAGAAGCAGGAATGATAAATGCTACTCTTGGTTTTGTAATCGGAATGGCTGGATGGATTTACATTTTATATGAAATCTTTTCTGGTGAAGCAGGTAAAGTTGCTGCTAAATCTGGTAACAAATCATTAGTAACAGCATTCAGCGCTTTAAGAATGATCGTTACTGTA LITVPLQLVEFYLILSAVKKVPTGIFWRILIGSLVMLVGGYLGEAGMINATLGFVIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFSALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCACTACAGTTAGTAGAATTTTATTTAATTCTATCTGCA---------GTT---AAAAAAGTACCAACA---GGAATA------------------------------------TTCTGGAGA---ATTTTAATCGGTTCTTTAGTAATGTTAGTAGGTGGTTATCTTGGAGAA---------GCA------------------GGA------ATG---------------------------------ATA------------------------------------------------------------------AATGCT------------------ACTCTTGGT---TTTGTAATCGGAATGGCTGGATGGATTTACATTTTATATGAAATC---------------TTT------TCT---GGTGAAGCAGGTAAAGTTGCTGCTAAA------TCT---GGTAACAAATCATTA---GTA---ACA---GCA---TTC---AGC---GCTTTA---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQLVEFYLILSA---V-KKVPT-GI------------FWR-ILIGSLVMLVGGYLGE---A------G--M-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-S-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ927943 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU020_601e6cbf8247840a5f033d95102a0be1 gb|KJ927943| PRGD_OTU020_601e6cbf8247840a5f033d95102a0be1, putative proteorhodopsin gene, partial cds. PRGD_OTU020_601e6cbf8247840a5f033d95102a0be1, putative proteorhodopsin gene, partial cds. KJ927943 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Atlantic side (73.9992, 19.2097), Mediterranean Sea (33.762, 29.175), Indian Ocean (-23.5956, 69.0419) TTAATTACTGTACCATTACAGTTAGTAGAATTTTATCTAATTCTATCTGCAGTAAAGAAAGTACCAACAGGAATATTCTGGAGAATTTTAATCGGTTCTTTAGTTATGTTAGTTGGTGGTTATCTTGGAGAAGCAGGAATGATAAATGCTACTCTTGGTTTCGTAATCGGAATGGCTGGATGGATTTACATTTTATATGAAATCTTTTCTGGTGAAGCAGGTAAAGTTGCTGCTAAATCTGGTAACAAATCACTTGTAACAGCATTCAGCGCTTTAAGAATGATCGTTACTGTT LITVPLQLVEFYLILSAVKKVPTGIFWRILIGSLVMLVGGYLGEAGMINATLGFVIGMAGWIYILYEIFSGEAGKVAAKSGNKSLVTAFSALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCATTACAGTTAGTAGAATTTTATCTAATTCTATCTGCA---------GTA---AAGAAAGTACCAACA---GGAATA------------------------------------TTCTGGAGA---ATTTTAATCGGTTCTTTAGTTATGTTAGTTGGTGGTTATCTTGGAGAA---------GCA------------------GGA------ATG---------------------------------ATA------------------------------------------------------------------AATGCT------------------ACTCTTGGT---TTCGTAATCGGAATGGCTGGATGGATTTACATTTTATATGAAATC---------------TTT------TCT---GGTGAAGCAGGTAAAGTTGCTGCTAAA------TCT---GGTAACAAATCACTT---GTA---ACA---GCA---TTC---AGC---GCTTTA---AGAATGATCGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQLVEFYLILSA---V-KKVPT-GI------------FWR-ILIGSLVMLVGGYLGE---A------G--M-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKSL-V-T-A-F-S-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ927960 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU020_df16bef20e474aeff9c7e1e7ce243841 gb|KJ927960| PRGD_OTU020_df16bef20e474aeff9c7e1e7ce243841, putative proteorhodopsin gene, partial cds. PRGD_OTU020_df16bef20e474aeff9c7e1e7ce243841, putative proteorhodopsin gene, partial cds. KJ927960 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) TTAATCACTGTACCTTTACAGCTAGTAGAATTTTATCTAATTCTGTCAGCAGTGAAAAAAGTACCAACAGGAATTTTCTGGAGAATCTTAATTGGTTCAATAGTTATGCTTGTAGGTGGATACCTAGGAGAAGCAGGTTTCATCAACGAGATGCTTGGTTTTGTAATCGGTATGGCTGGATGGCTTTACATTCTTTTTGAAATATTTTCAGGAGAAGCAGGAAAAGTTGCAGCTAAATCTGGTAACAAATCCTTAACAACTGCATTCGGTGCTTTAAGAATGATCGTTACAGTT LITVPLQLVEFYLILSAVKKVPTGIFWRILIGSIVMLVGGYLGEAGFINEMLGFVIGMAGWLYILFEIFSGEAGKVAAKSGNKSLTTAFGALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCTTTACAGCTAGTAGAATTTTATCTAATTCTGTCAGCA---------GTG---AAAAAAGTACCAACA---GGAATT------------------------------------TTCTGGAGA---ATCTTAATTGGTTCAATAGTTATGCTTGTAGGTGGATACCTAGGAGAA---------GCA------------------GGT------TTC---------------------------------ATC------------------------------------------------------------------AACGAG------------------ATGCTTGGT---TTTGTAATCGGTATGGCTGGATGGCTTTACATTCTTTTTGAAATA---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGCAGCTAAA------TCT---GGTAACAAATCCTTA---ACA---ACT---GCA---TTC---GGT---GCTTTA---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQLVEFYLILSA---V-KKVPT-GI------------FWR-ILIGSIVMLVGGYLGE---A------G--F-----------I----------------------NE------MLG-FVIGMAGWLYILFEI-----F--S-GEAGKVAAK--S-GNKSL-T-T-A-F-G-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ927954 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU020_96a68510a1b25cc314f8cd96a0580a5b gb|KJ927954| PRGD_OTU020_96a68510a1b25cc314f8cd96a0580a5b, putative proteorhodopsin gene, partial cds. PRGD_OTU020_96a68510a1b25cc314f8cd96a0580a5b, putative proteorhodopsin gene, partial cds. KJ927954 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTAATCACTGTACCTTTACAGCTAGTAGAATTTTATCTAATTCTGTCAGCAGTGAAAAAAGTACCAACAGGAATTTTCTGGAGAATCTTAATTGGTTCAATAGTTATGCTTGTAGGTGGATACCTAGGAGAAGCAGGTTTCATCAACGAGATGCTTGGTTTTGTAATCGGTATGGCTGGATGGCTTTACATTCTTTTTGAAATATTTTCAGGAGAAGCAGGAAAAGCTGCAGCTAAATCTGGTAACAAATCTTTAGCAACTGCATTCGGTGCTTTAAGAATGATCGTTACAGTT LITVPLQLVEFYLILSAVKKVPTGIFWRILIGSIVMLVGGYLGEAGFINEMLGFVIGMAGWLYILFEIFSGEAGKAAAKSGNKSLATAFGALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCTTTACAGCTAGTAGAATTTTATCTAATTCTGTCAGCA---------GTG---AAAAAAGTACCAACA---GGAATT------------------------------------TTCTGGAGA---ATCTTAATTGGTTCAATAGTTATGCTTGTAGGTGGATACCTAGGAGAA---------GCA------------------GGT------TTC---------------------------------ATC------------------------------------------------------------------AACGAG------------------ATGCTTGGT---TTTGTAATCGGTATGGCTGGATGGCTTTACATTCTTTTTGAAATA---------------TTT------TCA---GGAGAAGCAGGAAAAGCTGCAGCTAAA------TCT---GGTAACAAATCTTTA---GCA---ACT---GCA---TTC---GGT---GCTTTA---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQLVEFYLILSA---V-KKVPT-GI------------FWR-ILIGSIVMLVGGYLGE---A------G--F-----------I----------------------NE------MLG-FVIGMAGWLYILFEI-----F--S-GEAGKAAAK--S-GNKSL-A-T-A-F-G-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ927948 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU020_7385b888cded7111d1b10a7032e4f6e5 gb|KJ927948| PRGD_OTU020_7385b888cded7111d1b10a7032e4f6e5, putative proteorhodopsin gene, partial cds. PRGD_OTU020_7385b888cded7111d1b10a7032e4f6e5, putative proteorhodopsin gene, partial cds. KJ927948 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTAATAACTGTACCACTACAGTTAATAGAATTTTATTTAATTCTAGCTGCAGTTAAGAAAGTTCCAACTGGAATATTCTGGAGAATCTTAATCGGTTCACTAGTAATGTTAGTAGGTGGATATATGGGAGAAGCTGGATTCATCAACCCAATGCTTGGTTTTATAATCGGTATGGCTGGATGGATTTACATCTTATATGAAATATTTTCAGGAGAAGCAGGAAAAGTTGTTGCTAAATCTGGAAACAAATCACTTGCAACAGCATTTGGTGCTTTAAGAATGATCGTTACAGTA LITVPLQLIEFYLILAAVKKVPTGIFWRILIGSLVMLVGGYMGEAGFINPMLGFIIGMAGWIYILYEIFSGEAGKVVAKSGNKSLATAFGALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACTGTACCACTACAGTTAATAGAATTTTATTTAATTCTAGCTGCA---------GTT---AAGAAAGTTCCAACT---GGAATA------------------------------------TTCTGGAGA---ATCTTAATCGGTTCACTAGTAATGTTAGTAGGTGGATATATGGGAGAA---------GCT------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACCCA------------------ATGCTTGGT---TTTATAATCGGTATGGCTGGATGGATTTACATCTTATATGAAATA---------------TTT------TCA---GGAGAAGCAGGAAAAGTTGTTGCTAAA------TCT---GGAAACAAATCACTT---GCA---ACA---GCA---TTT---GGT---GCTTTA---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQLIEFYLILAA---V-KKVPT-GI------------FWR-ILIGSLVMLVGGYMGE---A------G--F-----------I----------------------NP------MLG-FIIGMAGWIYILYEI-----F--S-GEAGKVVAK--S-GNKSL-A-T-A-F-G-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ927949 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU020_7e64c5789eaafa99acb28a387b0bdb65 gb|KJ927949| PRGD_OTU020_7e64c5789eaafa99acb28a387b0bdb65, putative proteorhodopsin gene, partial cds. PRGD_OTU020_7e64c5789eaafa99acb28a387b0bdb65, putative proteorhodopsin gene, partial cds. KJ927949 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTAATTACTGTACCTTTACAGCTAGTTGAGTTTTATTTAATTCTTGCAGCAGTAAGAAAAGTACCAACTGGAATATTCTGGAGAATATTAATTGGTTCTATCGTAATGCTTGTAGGTGGATATGCAGGAGAAGCTGGATTCATTAATGCGATGCTTGGTTTCATTATCGGTATGGCTGGATGGATTTATATTCTTTATGAAATATTCTCTGGTGAAGCAGGTAAATCAATGGCTAAATCAGGTAACAAGTCTCTTGTTACTGCGTTCAGCGCATTGAGAATGATCGTTACTGTT LITVPLQLVEFYLILAAVRKVPTGIFWRILIGSIVMLVGGYAGEAGFINAMLGFIIGMAGWIYILYEIFSGEAGKSMAKSGNKSLVTAFSALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCTTTACAGCTAGTTGAGTTTTATTTAATTCTTGCAGCA---------GTA---AGAAAAGTACCAACT---GGAATA------------------------------------TTCTGGAGA---ATATTAATTGGTTCTATCGTAATGCTTGTAGGTGGATATGCAGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AATGCG------------------ATGCTTGGT---TTCATTATCGGTATGGCTGGATGGATTTATATTCTTTATGAAATA---------------TTC------TCT---GGTGAAGCAGGTAAATCAATGGCTAAA------TCA---GGTAACAAGTCTCTT---GTT---ACT---GCG---TTC---AGC---GCATTG---AGAATGATCGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQLVEFYLILAA---V-RKVPT-GI------------FWR-ILIGSIVMLVGGYAGE---A------G--F-----------I----------------------NA------MLG-FIIGMAGWIYILYEI-----F--S-GEAGKSMAK--S-GNKSL-V-T-A-F-S-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ927953 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU020_925adfe2ff41598cf07adbf5e8af8b82 gb|KJ927953| PRGD_OTU020_925adfe2ff41598cf07adbf5e8af8b82, putative proteorhodopsin gene, partial cds. PRGD_OTU020_925adfe2ff41598cf07adbf5e8af8b82, putative proteorhodopsin gene, partial cds. KJ927953 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTAATTACTGTACCTTTACAGCTAGTTGAGTTTTATTTAATTCTTGCAGCAGTAAGAAAAGTGCCAACTGGAATATTCTGGAGAATATTAATTGGTTCTATCGTGATGCTTGTAGGTGGATATGCAGGAGAAGCAGGATTCATTAATGCGATGCTTGGTTTCATTATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATATTCTCAGGTGAAGCAGGCAAATCAATGGCTAAATCAGGTAACAAGTCTCTTGTTACTGCGTTCAGCGCATTGAGAATGATCGTTACTGTT LITVPLQLVEFYLILAAVRKVPTGIFWRILIGSIVMLVGGYAGEAGFINAMLGFIIGMAGWIYILYEIFSGEAGKSMAKSGNKSLVTAFSALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCTTTACAGCTAGTTGAGTTTTATTTAATTCTTGCAGCA---------GTA---AGAAAAGTGCCAACT---GGAATA------------------------------------TTCTGGAGA---ATATTAATTGGTTCTATCGTGATGCTTGTAGGTGGATATGCAGGAGAA---------GCA------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AATGCG------------------ATGCTTGGT---TTCATTATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCAGGCAAATCAATGGCTAAA------TCA---GGTAACAAGTCTCTT---GTT---ACT---GCG---TTC---AGC---GCATTG---AGAATGATCGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQLVEFYLILAA---V-RKVPT-GI------------FWR-ILIGSIVMLVGGYAGE---A------G--F-----------I----------------------NA------MLG-FIIGMAGWIYILYEI-----F--S-GEAGKSMAK--S-GNKSL-V-T-A-F-S-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ927933 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU020_1a11514fdd21f345464ed51baa6314b7 gb|KJ927933| PRGD_OTU020_1a11514fdd21f345464ed51baa6314b7, putative proteorhodopsin gene, partial cds. PRGD_OTU020_1a11514fdd21f345464ed51baa6314b7, putative proteorhodopsin gene, partial cds. KJ927933 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATTACTGTACCTTTACAGCTAGTTGAGTTTTATTTAATTCTTGCAGCAGTAAGAAAAGTTCCAACTGGAATATTCTGGAGAATATTAATTGGTTCTATCGTCATGCTTGTAGGTGGATATGCAGGAGAAGCTGGATTCATTAACGCTATGCTTGGTTTCATTATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATATTCTCTGGTGAAGCAGGTAAATCAATGGCTAAATCAGGTAACAAGTCTCTTGTTACTGCGTTCAGCGCATTGAGAATGATCGTTACTGTT LITVPLQLVEFYLILAAVRKVPTGIFWRILIGSIVMLVGGYAGEAGFINAMLGFIIGMAGWIYILYEIFSGEAGKSMAKSGNKSLVTAFSALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCTTTACAGCTAGTTGAGTTTTATTTAATTCTTGCAGCA---------GTA---AGAAAAGTTCCAACT---GGAATA------------------------------------TTCTGGAGA---ATATTAATTGGTTCTATCGTCATGCTTGTAGGTGGATATGCAGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ATGCTTGGT---TTCATTATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATA---------------TTC------TCT---GGTGAAGCAGGTAAATCAATGGCTAAA------TCA---GGTAACAAGTCTCTT---GTT---ACT---GCG---TTC---AGC---GCATTG---AGAATGATCGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQLVEFYLILAA---V-RKVPT-GI------------FWR-ILIGSIVMLVGGYAGE---A------G--F-----------I----------------------NA------MLG-FIIGMAGWIYILYEI-----F--S-GEAGKSMAK--S-GNKSL-V-T-A-F-S-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ927963 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU020_eaefe799d340db7cc68571a3ffdfaad6 gb|KJ927963| PRGD_OTU020_eaefe799d340db7cc68571a3ffdfaad6, putative proteorhodopsin gene, partial cds. PRGD_OTU020_eaefe799d340db7cc68571a3ffdfaad6, putative proteorhodopsin gene, partial cds. KJ927963 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637), Arctic Ocean-Pacific side (69.5142, -133.4185), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTAATTACTGTACCTTTACAGCTAGTTGAGTTTTATTTAATTCTTGCAGCAGTAAGAAAAGTTCCAACTGGAATATTCTGGAGAATATTAATTGGTTCTATCGTTATGCTTGTAGGTGGATATGCAGGAGAAGCTGGATTCATCAACGCGATGCTAGGTTTCATTATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATATTCTCTGGTGAAGCAGGTAAATCAATGGCTAAATCAGGTAACAAGTCTCTTGTTACTGCATTCAGCGCATTGAGAATGATCGTTACTGTT LITVPLQLVEFYLILAAVRKVPTGIFWRILIGSIVMLVGGYAGEAGFINAMLGFIIGMAGWIYILYEIFSGEAGKSMAKSGNKSLVTAFSALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCTTTACAGCTAGTTGAGTTTTATTTAATTCTTGCAGCA---------GTA---AGAAAAGTTCCAACT---GGAATA------------------------------------TTCTGGAGA---ATATTAATTGGTTCTATCGTTATGCTTGTAGGTGGATATGCAGGAGAA---------GCT------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCG------------------ATGCTAGGT---TTCATTATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATA---------------TTC------TCT---GGTGAAGCAGGTAAATCAATGGCTAAA------TCA---GGTAACAAGTCTCTT---GTT---ACT---GCA---TTC---AGC---GCATTG---AGAATGATCGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQLVEFYLILAA---V-RKVPT-GI------------FWR-ILIGSIVMLVGGYAGE---A------G--F-----------I----------------------NA------MLG-FIIGMAGWIYILYEI-----F--S-GEAGKSMAK--S-GNKSL-V-T-A-F-S-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ927942 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU020_600779b021fe04a00d12347b9cf54bbd gb|KJ927942| PRGD_OTU020_600779b021fe04a00d12347b9cf54bbd, putative proteorhodopsin gene, partial cds. PRGD_OTU020_600779b021fe04a00d12347b9cf54bbd, putative proteorhodopsin gene, partial cds. KJ927942 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-33.28, 45.35) TTAATTACTGTACCTTTACAGCTAGTTGAGTTTTATTTAATTCTTGCAGCAGTAAGAAAAGTACCAACAGGAATATTCTGGAGAATATTAATTGGTTCTATTGTTATGCTTGTAGGTGGATATGCAGGAGAAGCTGGATTCATCAACGCAATGCTTGGTTTCATTATCGGTATGGCTGGATGGATATACATTCTTTATGAAATATTCTCTGGTGAAGCAGGCAAATCAATGGCTAAATCAGGTAACAAATCACTTGTTACTGCGTTCAGTGCATTGAGAATGATCGTTACTGTT LITVPLQLVEFYLILAAVRKVPTGIFWRILIGSIVMLVGGYAGEAGFINAMLGFIIGMAGWIYILYEIFSGEAGKSMAKSGNKSLVTAFSALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCTTTACAGCTAGTTGAGTTTTATTTAATTCTTGCAGCA---------GTA---AGAAAAGTACCAACA---GGAATA------------------------------------TTCTGGAGA---ATATTAATTGGTTCTATTGTTATGCTTGTAGGTGGATATGCAGGAGAA---------GCT------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------ATGCTTGGT---TTCATTATCGGTATGGCTGGATGGATATACATTCTTTATGAAATA---------------TTC------TCT---GGTGAAGCAGGCAAATCAATGGCTAAA------TCA---GGTAACAAATCACTT---GTT---ACT---GCG---TTC---AGT---GCATTG---AGAATGATCGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQLVEFYLILAA---V-RKVPT-GI------------FWR-ILIGSIVMLVGGYAGE---A------G--F-----------I----------------------NA------MLG-FIIGMAGWIYILYEI-----F--S-GEAGKSMAK--S-GNKSL-V-T-A-F-S-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ927957 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU020_ac5fd2fad73a41f375d51cdccaca593e gb|KJ927957| PRGD_OTU020_ac5fd2fad73a41f375d51cdccaca593e, putative proteorhodopsin gene, partial cds. PRGD_OTU020_ac5fd2fad73a41f375d51cdccaca593e, putative proteorhodopsin gene, partial cds. KJ927957 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Mediterranean Sea (38.6308, 7.9097) TTAATTACTGTACCTTTACAGCTAGTTGAGTTTTATTTAATTCTTGCAGCAGTAAGAAAAGTTCCAACTGGAATATTCTGGAGAATATTAATTGGTTCTATTGTTATGCTTGTAGGTGGATATGCAGGAGAAGCGGGATTCATCAACGCAATGCTTGGTTTCATTATCGGTATGGCTGGATGGATATACATTCTTTATGAAATATTCTCTGGTGAAGCAGGCAAATCAATGGCTAAATCAGGTAACAAGTCACTTGTTACTGCATTCAGTGCATTGAGAATGATCGTTACTGTT LITVPLQLVEFYLILAAVRKVPTGIFWRILIGSIVMLVGGYAGEAGFINAMLGFIIGMAGWIYILYEIFSGEAGKSMAKSGNKSLVTAFSALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCTTTACAGCTAGTTGAGTTTTATTTAATTCTTGCAGCA---------GTA---AGAAAAGTTCCAACT---GGAATA------------------------------------TTCTGGAGA---ATATTAATTGGTTCTATTGTTATGCTTGTAGGTGGATATGCAGGAGAA---------GCG------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------ATGCTTGGT---TTCATTATCGGTATGGCTGGATGGATATACATTCTTTATGAAATA---------------TTC------TCT---GGTGAAGCAGGCAAATCAATGGCTAAA------TCA---GGTAACAAGTCACTT---GTT---ACT---GCA---TTC---AGT---GCATTG---AGAATGATCGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQLVEFYLILAA---V-RKVPT-GI------------FWR-ILIGSIVMLVGGYAGE---A------G--F-----------I----------------------NA------MLG-FIIGMAGWIYILYEI-----F--S-GEAGKSMAK--S-GNKSL-V-T-A-F-S-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ927952 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU020_8f8fd925ed69c6c901b6e802ae91c8d0 gb|KJ927952| PRGD_OTU020_8f8fd925ed69c6c901b6e802ae91c8d0, putative proteorhodopsin gene, partial cds. PRGD_OTU020_8f8fd925ed69c6c901b6e802ae91c8d0, putative proteorhodopsin gene, partial cds. KJ927952 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTAATTACAGTACCATTACAATTAGTAGAATTTTATCTAATATTATCTGCAGTTAGAAAAGTTCCATCAGGAATATTCTGGAGAATTTTAATCGGTTCTTTAGTAATGTTAATTGGTGGATATTGTGGAGAAGCTGGATTCATCAACCCAATGCTTGGTTTCGTAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATCTTTTCTGGAGAAGCTGGTAAGTCAATGGCTAAATCAGGAAACAAGTCTCTTGTTACAGCATTTAGTGCGTTGAGAATGATCGTTACAGTT LITVPLQLVEFYLILSAVRKVPSGIFWRILIGSLVMLIGGYCGEAGFINPMLGFVIGMAGWIYILYEIFSGEAGKSMAKSGNKSLVTAFSALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTACCATTACAATTAGTAGAATTTTATCTAATATTATCTGCA---------GTT---AGAAAAGTTCCATCA---GGAATA------------------------------------TTCTGGAGA---ATTTTAATCGGTTCTTTAGTAATGTTAATTGGTGGATATTGTGGAGAA---------GCT------------------GGA------TTC---------------------------------ATC------------------------------------------------------------------AACCCA------------------ATGCTTGGT---TTCGTAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAATC---------------TTT------TCT---GGAGAAGCTGGTAAGTCAATGGCTAAA------TCA---GGAAACAAGTCTCTT---GTT---ACA---GCA---TTT---AGT---GCGTTG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQLVEFYLILSA---V-RKVPS-GI------------FWR-ILIGSLVMLIGGYCGE---A------G--F-----------I----------------------NP------MLG-FVIGMAGWIYILYEI-----F--S-GEAGKSMAK--S-GNKSL-V-T-A-F-S-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928920 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU061_63e1f4deaf6524ec6967f1774fa44b87 gb|KJ928920| PRGD_OTU061_63e1f4deaf6524ec6967f1774fa44b87, putative proteorhodopsin gene, partial cds. PRGD_OTU061_63e1f4deaf6524ec6967f1774fa44b87, putative proteorhodopsin gene, partial cds. KJ928920 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAATTCTAGCAGCAGTTAAGAAAATCCCAGGAGCAATCTTCTGGAGATTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAAGCAGGTTACATCAATGCTATGCTTGGTTTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCTGGTGAAGCTGGAAAAATTGCAGCTAAAACTGGAAACAAGCCATTAGCAACTGCATGGGGTGCTATGAGAATGATCGTAACAATC LITVPLQMIEFYLILAAVKKIPGAIFWRLLIGSLVMLIGGYLGEAGYINAMLGFIVGMAGWIYILYEVFSGEAGKIAAKTGNKPLATAWGAMRMIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCATTACAGATGATCGAGTTTTACTTAATTCTAGCAGCA---------GTT---AAGAAAATCCCAGGA---GCAATC------------------------------------TTCTGGAGA---TTATTAATTGGTTCGCTTGTGATGTTAATTGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ATGCTTGGT---TTCATAGTCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCTGGAAAAATTGCAGCTAAA------ACT---GGAAACAAGCCATTA---GCA---ACT---GCA---TGG---GGT---GCTATG---AGAATGATCGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-KKIPG-AI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------MLG-FIVGMAGWIYILYEV-----F--S-GEAGKIAAK--T-GNKPL-A-T-A-W-G-AM-RMIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928921 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU061_6c19f5e1e88b402ccc911a1a084924a0 gb|KJ928921| PRGD_OTU061_6c19f5e1e88b402ccc911a1a084924a0, putative proteorhodopsin gene, partial cds. PRGD_OTU061_6c19f5e1e88b402ccc911a1a084924a0, putative proteorhodopsin gene, partial cds. KJ928921 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATTACTGTACCGTTACAGATGATAGAATTTTACTTAATTCTAGCAGCAGTAAGAAAAATCCCAGGAGCTATCTTCTGGAGATTGCTAATTGGTTCACTAGTTATGTTAATTGGTGGATACATGGGAGAAGCAGGTTACATCAATGCAATGCTTGGTTTCATTATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCAGGTGAGGCTGGTAAATTAGCAGCTAAGTCTGGTAATAAGCCATTAGCTACTGCATGGGGCGCTATGAGAATGATCGTAACAGTA LITVPLQMIEFYLILAAVRKIPGAIFWRLLIGSLVMLIGGYMGEAGYINAMLGFIIGMAGWIYILYEVFSGEAGKLAAKSGNKPLATAWGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCGTTACAGATGATAGAATTTTACTTAATTCTAGCAGCA---------GTA---AGAAAAATCCCAGGA---GCTATC------------------------------------TTCTGGAGA---TTGCTAATTGGTTCACTAGTTATGTTAATTGGTGGATACATGGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCA------------------ATGCTTGGT---TTCATTATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCA---GGTGAGGCTGGTAAATTAGCAGCTAAG------TCT---GGTAATAAGCCATTA---GCT---ACT---GCA---TGG---GGC---GCTATG---AGAATGATCGTAACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-RKIPG-AI------------FWR-LLIGSLVMLIGGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWIYILYEV-----F--S-GEAGKLAAK--S-GNKPL-A-T-A-W-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928925 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU061_9c0c074ad34e5dced1544bdc98fdd53c gb|KJ928925| PRGD_OTU061_9c0c074ad34e5dced1544bdc98fdd53c, putative proteorhodopsin gene, partial cds. PRGD_OTU061_9c0c074ad34e5dced1544bdc98fdd53c, putative proteorhodopsin gene, partial cds. KJ928925 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -33.28, 45.35) TTAATTACTGTACCGTTACAGATGATAGAATTTTACTTAATTCTAGCAGCAGTAAGAAAAATCCCAGGAGCTATTTTCTGGAGATTGCTAATTGGTTCACTAGTTATGTTAATTGGTGGATACATGGGAGAAGCAGGTTACATCAATGCAATGCTTGGTTTCATTATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCAGGTGAGGCTGGTAAATTAGCAGCTAAATCTGGCAATAAGCCATTAGCTACTGCTTGGGGTGCTATGAGAATGATCGTAACAGTA LITVPLQMIEFYLILAAVRKIPGAIFWRLLIGSLVMLIGGYMGEAGYINAMLGFIIGMAGWIYILYEVFSGEAGKLAAKSGNKPLATAWGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCGTTACAGATGATAGAATTTTACTTAATTCTAGCAGCA---------GTA---AGAAAAATCCCAGGA---GCTATT------------------------------------TTCTGGAGA---TTGCTAATTGGTTCACTAGTTATGTTAATTGGTGGATACATGGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCA------------------ATGCTTGGT---TTCATTATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCA---GGTGAGGCTGGTAAATTAGCAGCTAAA------TCT---GGCAATAAGCCATTA---GCT---ACT---GCT---TGG---GGT---GCTATG---AGAATGATCGTAACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-RKIPG-AI------------FWR-LLIGSLVMLIGGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWIYILYEV-----F--S-GEAGKLAAK--S-GNKPL-A-T-A-W-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928917 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU061_04c30b903bb55e1d73c51afbab3df367 gb|KJ928917| PRGD_OTU061_04c30b903bb55e1d73c51afbab3df367, putative proteorhodopsin gene, partial cds. PRGD_OTU061_04c30b903bb55e1d73c51afbab3df367, putative proteorhodopsin gene, partial cds. KJ928917 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-14.48, 113.45) TTAATTACTGTACCATTACAGATGATAGAGTTTTATTTAATTCTAGCAGCTGTGAGAAAAGTATCAGGTAACATCTTCTGGAGACTATTAATTGGATCTCTAGTAATGTTAATCGGAGGTTACTTAGGGGAAGCAGGTTACATCAACGCTATGCTTGGTTTCATAATCGGTATGGCTGGATGGATCTACATCTTGTATGAAGTATTCTCTGGTGAAGCTGGTAAAATGGCAGCTAAAAGCGGTAACAGAGGATTAAGTACTGCATTTGGTGCTATGAGAATGATCGTTACAGTA LITVPLQMIEFYLILAAVRKVSGNIFWRLLIGSLVMLIGGYLGEAGYINAMLGFIIGMAGWIYILYEVFSGEAGKMAAKSGNRGLSTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCATTACAGATGATAGAGTTTTATTTAATTCTAGCAGCT---------GTG---AGAAAAGTATCAGGT---AACATC------------------------------------TTCTGGAGA---CTATTAATTGGATCTCTAGTAATGTTAATCGGAGGTTACTTAGGGGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ATGCTTGGT---TTCATAATCGGTATGGCTGGATGGATCTACATCTTGTATGAAGTA---------------TTC------TCT---GGTGAAGCTGGTAAAATGGCAGCTAAA------AGC---GGTAACAGAGGATTA---AGT---ACT---GCA---TTT---GGT---GCTATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-RKVSG-NI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWIYILYEV-----F--S-GEAGKMAAK--S-GNRGL-S-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928923 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU061_814f5fb3d8eb9dd32f3b3c79eb21a895 gb|KJ928923| PRGD_OTU061_814f5fb3d8eb9dd32f3b3c79eb21a895, putative proteorhodopsin gene, partial cds. PRGD_OTU061_814f5fb3d8eb9dd32f3b3c79eb21a895, putative proteorhodopsin gene, partial cds. KJ928923 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -33.9602, -73.3769), Indian Ocean (-23.5956, 69.0419) TTAATTACTGTACCATTACAGATGATAGAATTTTATTTAATTCTAGCAGCTGTGAGAAAAGTATCAGGTAACATCTTCTGGAGACTATTAATTGGATCTCTAGTAATGTTAATCGGAGGTTACTTAGGAGAAGCAGGTTACATCAATGCGATGCTTGGTTTCATAATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCTGGTGAAGCTGGTAAAATGGCAGCTAAAAGCGGTAACAGAGGATTAAGTACTGCATTTGGTGCTATGAGAATGATCGTTACAGTA LITVPLQMIEFYLILAAVRKVSGNIFWRLLIGSLVMLIGGYLGEAGYINAMLGFIIGMAGWIYILYEVFSGEAGKMAAKSGNRGLSTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCATTACAGATGATAGAATTTTATTTAATTCTAGCAGCT---------GTG---AGAAAAGTATCAGGT---AACATC------------------------------------TTCTGGAGA---CTATTAATTGGATCTCTAGTAATGTTAATCGGAGGTTACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCG------------------ATGCTTGGT---TTCATAATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCTGGTAAAATGGCAGCTAAA------AGC---GGTAACAGAGGATTA---AGT---ACT---GCA---TTT---GGT---GCTATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-RKVSG-NI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWIYILYEV-----F--S-GEAGKMAAK--S-GNRGL-S-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ929889 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU340_otuREP_f99265799c58f38b44c31d8d35ec3e38 gb|KJ929889| PRGD_OTU340_otuREP_f99265799c58f38b44c31d8d35ec3e38, putative proteorhodopsin gene, partial cds. PRGD_OTU340_otuREP_f99265799c58f38b44c31d8d35ec3e38, putative proteorhodopsin gene, partial cds. KJ929889 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACTGTACCATTATTGATGTTAGAATTCTACTTTGTTCTATCAGCAGTAAAAAAAGTACCAGGAACGATTTTCTGGAGACTTTTATTAGGTTCATTAGTTATGTTGATCGGTGGTTATGCTGGAGAAGCAGGTTACATCAATGCTATGCTTGGATTTGTAATAGGTATGGCTGGATGGGTTTACATTCTGTATGAAGTATTCTCTGGAGACGCTGGTAAGATAGCAGCAAAAAGTGGAAACAAAGCTCTTGTTACTGCTTTTGGTGCAATGAGAATGATTGTAACAGTT LITVPLLMLEFYFVLSAVKKVPGTIFWRLLLGSLVMLIGGYAGEAGYINAMLGFVIGMAGWVYILYEVFSGDAGKIAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCATTATTGATGTTAGAATTCTACTTTGTTCTATCAGCA---------GTA---AAAAAAGTACCAGGA---ACGATT------------------------------------TTCTGGAGA---CTTTTATTAGGTTCATTAGTTATGTTGATCGGTGGTTATGCTGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ATGCTTGGA---TTTGTAATAGGTATGGCTGGATGGGTTTACATTCTGTATGAAGTA---------------TTC------TCT---GGAGACGCTGGTAAGATAGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-KKVPG-TI------------FWR-LLLGSLVMLIGGYAGE---A------G--Y-----------I----------------------NA------MLG-FVIGMAGWVYILYEV-----F--S-GDAGKIAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928005 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU022_044594bbf5c233b4fcb25e4af6bfe059 gb|KJ928005| PRGD_OTU022_044594bbf5c233b4fcb25e4af6bfe059, putative proteorhodopsin gene, partial cds. PRGD_OTU022_044594bbf5c233b4fcb25e4af6bfe059, putative proteorhodopsin gene, partial cds. KJ928005 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACAGTGCCACTTCAAATGATCGAATTCTATCTAATCTTGGCAGCTGTAAGAAAGGTGCCAACTTCTATATTCTGGAAGCTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCAGGTTACATACAACCATTTGTAGGTTTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATATTCTCAGGTGAAGCTGGAACTATGGCAGCTAAAGCTGGTAACAAAGCTATGGCGACTGCTTTCAGTGCTATGAGAATAATCGTAACAATT LITVPLQMIEFYLILAAVRKVPTSIFWKLLIGSLVMLIGGYLGEAGYIQPFVGFVIGMAGWIYILFEIFSGEAGTMAAKAGNKAMATAFSAMRIIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTGCCACTTCAAATGATCGAATTCTATCTAATCTTGGCAGCT---------GTA---AGAAAGGTGCCAACT---TCTATA------------------------------------TTCTGGAAG---CTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------CAACCA------------------TTTGTAGGT---TTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATA---------------TTC------TCA---GGTGAAGCTGGAACTATGGCAGCTAAA------GCT---GGTAACAAAGCTATG---GCG---ACT---GCT---TTC---AGT---GCTATG---AGAATAATCGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-RKVPT-SI------------FWK-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------QP------FVG-FVIGMAGWIYILFEI-----F--S-GEAGTMAAK--A-GNKAM-A-T-A-F-S-AM-RIIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928012 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU022_352d94ef04a30d6ade6fcd9bb26227f2 gb|KJ928012| PRGD_OTU022_352d94ef04a30d6ade6fcd9bb26227f2, putative proteorhodopsin gene, partial cds. PRGD_OTU022_352d94ef04a30d6ade6fcd9bb26227f2, putative proteorhodopsin gene, partial cds. KJ928012 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-23.5956, 69.0419) TTAATCACAGTGCCACTTCAAATGATCGAATTCTATCTAATATTGGCAGCTGTTAGAAAGGTGCCAACTTCTATATTCTGGAAGCTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCAGGTTACATACAACCATTTGTAGGTTTCGTAATTGGAATGGCTGGATGGATCTATATCTTGTTTGAAATATTCTCAGGTGAAGCTGGAACAATGGCAGCTAAAGCTGGTAACAAAGCTATGGCTACAGCCTTCAGCGCTATGAGAATAATCGTAACTATT LITVPLQMIEFYLILAAVRKVPTSIFWKLLIGSLVMLIGGYLGEAGYIQPFVGFVIGMAGWIYILFEIFSGEAGTMAAKAGNKAMATAFSAMRIIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTGCCACTTCAAATGATCGAATTCTATCTAATATTGGCAGCT---------GTT---AGAAAGGTGCCAACT---TCTATA------------------------------------TTCTGGAAG---CTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------CAACCA------------------TTTGTAGGT---TTCGTAATTGGAATGGCTGGATGGATCTATATCTTGTTTGAAATA---------------TTC------TCA---GGTGAAGCTGGAACAATGGCAGCTAAA------GCT---GGTAACAAAGCTATG---GCT---ACA---GCC---TTC---AGC---GCTATG---AGAATAATCGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-RKVPT-SI------------FWK-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------QP------FVG-FVIGMAGWIYILFEI-----F--S-GEAGTMAAK--A-GNKAM-A-T-A-F-S-AM-RIIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928031 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU022_9188161629138c44365ac455c89edfe4 gb|KJ928031| PRGD_OTU022_9188161629138c44365ac455c89edfe4, putative proteorhodopsin gene, partial cds. PRGD_OTU022_9188161629138c44365ac455c89edfe4, putative proteorhodopsin gene, partial cds. KJ928031 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTAATCACAGTGCCACTTCAAATGATCGAATTCTATCTAATCTTGGCAGCTGTTAGAAAGGTGCCAACTTCTATATTCTGGAAGCTATTAATTGGTTCATTAGTAATGTTAATCGGTGGTTACTTAGGTGAAGCTGGTTACATACAACCATTTGTAGGTTTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATATTCTCAGGTGAAGCTGGAACAATGGCTGCTAGAGCTGGTAACAAAGCTATGGCGACTGCTTTTAGCGCTATGAGAATAATCGTAACTATT LITVPLQMIEFYLILAAVRKVPTSIFWKLLIGSLVMLIGGYLGEAGYIQPFVGFVIGMAGWIYILFEIFSGEAGTMAARAGNKAMATAFSAMRIIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTGCCACTTCAAATGATCGAATTCTATCTAATCTTGGCAGCT---------GTT---AGAAAGGTGCCAACT---TCTATA------------------------------------TTCTGGAAG---CTATTAATTGGTTCATTAGTAATGTTAATCGGTGGTTACTTAGGTGAA---------GCT------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------CAACCA------------------TTTGTAGGT---TTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATA---------------TTC------TCA---GGTGAAGCTGGAACAATGGCTGCTAGA------GCT---GGTAACAAAGCTATG---GCG---ACT---GCT---TTT---AGC---GCTATG---AGAATAATCGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-RKVPT-SI------------FWK-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------QP------FVG-FVIGMAGWIYILFEI-----F--S-GEAGTMAAR--A-GNKAM-A-T-A-F-S-AM-RIIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928025 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU022_7638041a1bd59653f62f278377480950 gb|KJ928025| PRGD_OTU022_7638041a1bd59653f62f278377480950, putative proteorhodopsin gene, partial cds. PRGD_OTU022_7638041a1bd59653f62f278377480950, putative proteorhodopsin gene, partial cds. KJ928025 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) TTAATCACAGTGCCACTTCAAATGATCGAATTCTATCTAATCTTGGCAGCTGTTAGAAAGGTGCCAACTTCTATATTCTGGAAGCTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGTTACATTCAACCATTTGTAGGTTTTGTAATTGGAATGGCTGGATGGATTTACATCTTATTTGAAATATTCTCAGGTGAAGCTGGAACTATGGCAGCCAAAGCTGGTAACAAGGCTATGGCGACTGCTTTTAGCGCTATGAGAATAATCGTAACAATT LITVPLQMIEFYLILAAVRKVPTSIFWKLLIGSLVMLIGGYLGEAGYIQPFVGFVIGMAGWIYILFEIFSGEAGTMAAKAGNKAMATAFSAMRIIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTGCCACTTCAAATGATCGAATTCTATCTAATCTTGGCAGCT---------GTT---AGAAAGGTGCCAACT---TCTATA------------------------------------TTCTGGAAG---CTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGT------TAC---------------------------------ATT------------------------------------------------------------------CAACCA------------------TTTGTAGGT---TTTGTAATTGGAATGGCTGGATGGATTTACATCTTATTTGAAATA---------------TTC------TCA---GGTGAAGCTGGAACTATGGCAGCCAAA------GCT---GGTAACAAGGCTATG---GCG---ACT---GCT---TTT---AGC---GCTATG---AGAATAATCGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-RKVPT-SI------------FWK-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------QP------FVG-FVIGMAGWIYILFEI-----F--S-GEAGTMAAK--A-GNKAM-A-T-A-F-S-AM-RIIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928033 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU022_9a1dce8342ddc29b9a8f0a2acdaf57e2 gb|KJ928033| PRGD_OTU022_9a1dce8342ddc29b9a8f0a2acdaf57e2, putative proteorhodopsin gene, partial cds. PRGD_OTU022_9a1dce8342ddc29b9a8f0a2acdaf57e2, putative proteorhodopsin gene, partial cds. KJ928033 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACAGTGCCACTTCAAATGATCGAATTCTATCTAATTTTGGCAGCTGTTAGAAAGGTGCCAACTTCTATATTCTGGAAGCTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGTTACATTCAACCATTTGTAGGTTTCGTAATTGGAATGGCTGGATGGATTTATATCTTGTTTGAAATATTCTCAGGTGAAGCTGGAACTATGGCAGCTAAAGCTGGTAACAAAGCTATGGCAACTGCTTTCAGTGCTATGAGAATAATCGTAACTATT LITVPLQMIEFYLILAAVRKVPTSIFWKLLIGSLVMLIGGYLGEAGYIQPFVGFVIGMAGWIYILFEIFSGEAGTMAAKAGNKAMATAFSAMRIIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTGCCACTTCAAATGATCGAATTCTATCTAATTTTGGCAGCT---------GTT---AGAAAGGTGCCAACT---TCTATA------------------------------------TTCTGGAAG---CTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGT------TAC---------------------------------ATT------------------------------------------------------------------CAACCA------------------TTTGTAGGT---TTCGTAATTGGAATGGCTGGATGGATTTATATCTTGTTTGAAATA---------------TTC------TCA---GGTGAAGCTGGAACTATGGCAGCTAAA------GCT---GGTAACAAAGCTATG---GCA---ACT---GCT---TTC---AGT---GCTATG---AGAATAATCGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-RKVPT-SI------------FWK-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------QP------FVG-FVIGMAGWIYILFEI-----F--S-GEAGTMAAK--A-GNKAM-A-T-A-F-S-AM-RIIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928004 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU022_otuREP_6a7d4bd4183d4871ecca2e21d2618d64 gb|KJ928004| PRGD_OTU022_otuREP_6a7d4bd4183d4871ecca2e21d2618d64, putative proteorhodopsin gene, partial cds. PRGD_OTU022_otuREP_6a7d4bd4183d4871ecca2e21d2618d64, putative proteorhodopsin gene, partial cds. KJ928004 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACAGTGCCACTTCAAATGATCGAATTCTATCTAATCTTGGCAGCTGTTAGAAAGGTGCCAACTTCTATATTCTGGAAGCTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGTTATATACAACCATTTGTAGGTTTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATATTCTCAGGTGAAGCTGGAACAATGGCAGCTAAAGCTGGTAACAAAGCTATGGCTACTGCTTTCAGTGCTATGAGAATAATCGTAACAATC LITVPLQMIEFYLILAAVRKVPTSIFWKLLIGSLVMLIGGYLGEAGYIQPFVGFVIGMAGWIYILFEIFSGEAGTMAAKAGNKAMATAFSAMRIIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTGCCACTTCAAATGATCGAATTCTATCTAATCTTGGCAGCT---------GTT---AGAAAGGTGCCAACT---TCTATA------------------------------------TTCTGGAAG---CTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGT------TAT---------------------------------ATA------------------------------------------------------------------CAACCA------------------TTTGTAGGT---TTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATA---------------TTC------TCA---GGTGAAGCTGGAACAATGGCAGCTAAA------GCT---GGTAACAAAGCTATG---GCT---ACT---GCT---TTC---AGT---GCTATG---AGAATAATCGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-RKVPT-SI------------FWK-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------QP------FVG-FVIGMAGWIYILFEI-----F--S-GEAGTMAAK--A-GNKAM-A-T-A-F-S-AM-RIIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928022 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU022_6621263a22fb73d78af7ba94c8d36eeb gb|KJ928022| PRGD_OTU022_6621263a22fb73d78af7ba94c8d36eeb, putative proteorhodopsin gene, partial cds. PRGD_OTU022_6621263a22fb73d78af7ba94c8d36eeb, putative proteorhodopsin gene, partial cds. KJ928022 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175; 33.935, 18.508), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAATCACAGTGCCACTTCAAATGATCGAATTCTATCTAATCTTGGCAGCTGTTAGAAAGGTGCCAACTTCTATATTCTGGAAGCTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGTTATATTCAACCATTTGTAGGTTTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATATTCTCAGGTGAAGCTGGAACAATGGCTGCCAAAGCTGGTAACAAAGCTATGGCTACAGCATTCAGCGCTATGAGAATAATCGTAACTATT LITVPLQMIEFYLILAAVRKVPTSIFWKLLIGSLVMLIGGYLGEAGYIQPFVGFVIGMAGWIYILFEIFSGEAGTMAAKAGNKAMATAFSAMRIIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTGCCACTTCAAATGATCGAATTCTATCTAATCTTGGCAGCT---------GTT---AGAAAGGTGCCAACT---TCTATA------------------------------------TTCTGGAAG---CTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------CAACCA------------------TTTGTAGGT---TTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATA---------------TTC------TCA---GGTGAAGCTGGAACAATGGCTGCCAAA------GCT---GGTAACAAAGCTATG---GCT---ACA---GCA---TTC---AGC---GCTATG---AGAATAATCGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-RKVPT-SI------------FWK-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------QP------FVG-FVIGMAGWIYILFEI-----F--S-GEAGTMAAK--A-GNKAM-A-T-A-F-S-AM-RIIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928009 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU022_1612ad14189ac2b324de5f3af6df61f4 gb|KJ928009| PRGD_OTU022_1612ad14189ac2b324de5f3af6df61f4, putative proteorhodopsin gene, partial cds. PRGD_OTU022_1612ad14189ac2b324de5f3af6df61f4, putative proteorhodopsin gene, partial cds. KJ928009 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACAGTACCACTTCAAATGATCGAATTCTATCTAATCTTGGCAGCTGTTAGAAAAGTGCCAACTTCTATATTCTGGAAGCTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGTTATATTCAACCATTTGTAGGTTTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATATTCTCAGGTGAAGCTGGAACAATGGCAGCTAAAGCTGGTAATAAAGCTATGGCTACAGCCTTCAGCGCTATGAGAATAATCGTAACTATC LITVPLQMIEFYLILAAVRKVPTSIFWKLLIGSLVMLIGGYLGEAGYIQPFVGFVIGMAGWIYILFEIFSGEAGTMAAKAGNKAMATAFSAMRIIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTACCACTTCAAATGATCGAATTCTATCTAATCTTGGCAGCT---------GTT---AGAAAAGTGCCAACT---TCTATA------------------------------------TTCTGGAAG---CTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------CAACCA------------------TTTGTAGGT---TTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATA---------------TTC------TCA---GGTGAAGCTGGAACAATGGCAGCTAAA------GCT---GGTAATAAAGCTATG---GCT---ACA---GCC---TTC---AGC---GCTATG---AGAATAATCGTAACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-RKVPT-SI------------FWK-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------QP------FVG-FVIGMAGWIYILFEI-----F--S-GEAGTMAAK--A-GNKAM-A-T-A-F-S-AM-RIIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928019 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU022_5b14aa007c706df3f3a3e1e9f075a2f3 gb|KJ928019| PRGD_OTU022_5b14aa007c706df3f3a3e1e9f075a2f3, putative proteorhodopsin gene, partial cds. PRGD_OTU022_5b14aa007c706df3f3a3e1e9f075a2f3, putative proteorhodopsin gene, partial cds. KJ928019 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (33.762, 29.175; 33.935, 18.508) TTAATTACAGTGCCACTTCAAATGATTGAATTCTATCTAATCTTGGCAGCTGTGAGAAAGGTGCCGACTTCTATATTCTGGAAGCTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGTTATATTCAACCATTTGTAGGTTTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATATTCTCAGGTGAAGCTGGAACTATGGCAGCAAAAGCTGGTAACAAAGCTATGTCAACTGCTTTCAGTGCAATGAGAATAATCGTAACTATC LITVPLQMIEFYLILAAVRKVPTSIFWKLLIGSLVMLIGGYLGEAGYIQPFVGFVIGMAGWIYILFEIFSGEAGTMAAKAGNKAMSTAFSAMRIIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCACTTCAAATGATTGAATTCTATCTAATCTTGGCAGCT---------GTG---AGAAAGGTGCCGACT---TCTATA------------------------------------TTCTGGAAG---CTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------CAACCA------------------TTTGTAGGT---TTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATA---------------TTC------TCA---GGTGAAGCTGGAACTATGGCAGCAAAA------GCT---GGTAACAAAGCTATG---TCA---ACT---GCT---TTC---AGT---GCAATG---AGAATAATCGTAACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-RKVPT-SI------------FWK-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------QP------FVG-FVIGMAGWIYILFEI-----F--S-GEAGTMAAK--A-GNKAM-S-T-A-F-S-AM-RIIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928035 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU022_9daf8d32b6f4d5e71249c11a75d23959 gb|KJ928035| PRGD_OTU022_9daf8d32b6f4d5e71249c11a75d23959, putative proteorhodopsin gene, partial cds. PRGD_OTU022_9daf8d32b6f4d5e71249c11a75d23959, putative proteorhodopsin gene, partial cds. KJ928035 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637), Mediterranean Sea (33.762, 29.175), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) TTAATCACAGTGCCACTTCAAATGATCGAATTCTATCTAATCTTGGCAGCTGTAAGAAAGGTGCCAACTTCTATATTCTGGAAGCTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGTTATATTCAACCATTTGTAGGTTTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATATTCTCAGGTGAAGCTGGAACTATGGCGGCAAAAGCTGGTAACAAGGCTATGTCAACTGCTTTCAGTGCAATGAGAATAATCGTAACTATC LITVPLQMIEFYLILAAVRKVPTSIFWKLLIGSLVMLIGGYLGEAGYIQPFVGFVIGMAGWIYILFEIFSGEAGTMAAKAGNKAMSTAFSAMRIIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTGCCACTTCAAATGATCGAATTCTATCTAATCTTGGCAGCT---------GTA---AGAAAGGTGCCAACT---TCTATA------------------------------------TTCTGGAAG---CTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------CAACCA------------------TTTGTAGGT---TTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATA---------------TTC------TCA---GGTGAAGCTGGAACTATGGCGGCAAAA------GCT---GGTAACAAGGCTATG---TCA---ACT---GCT---TTC---AGT---GCAATG---AGAATAATCGTAACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-RKVPT-SI------------FWK-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------QP------FVG-FVIGMAGWIYILFEI-----F--S-GEAGTMAAK--A-GNKAM-S-T-A-F-S-AM-RIIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928039 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU022_ca55e57e6dbe223c63f93188e6e45e65 gb|KJ928039| PRGD_OTU022_ca55e57e6dbe223c63f93188e6e45e65, putative proteorhodopsin gene, partial cds. PRGD_OTU022_ca55e57e6dbe223c63f93188e6e45e65, putative proteorhodopsin gene, partial cds. KJ928039 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) TTAATCACAGTGCCACTTCAAATGATCGAATTCTATCTAATCTTGGCAGCTGTAAGAAAGGTGCCAACTTCTATATTCTGGAAGCTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGTTATATTCAACCATTTGTAGGTTTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATATTCTCAGGTGAAGCTGGAACTATGGCGGCAAAAGCTGGTAACAAAGCTATGTCTACTGCTTTCAGTGCTATGAGAATAATCGTAACTATT LITVPLQMIEFYLILAAVRKVPTSIFWKLLIGSLVMLIGGYLGEAGYIQPFVGFVIGMAGWIYILFEIFSGEAGTMAAKAGNKAMSTAFSAMRIIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTGCCACTTCAAATGATCGAATTCTATCTAATCTTGGCAGCT---------GTA---AGAAAGGTGCCAACT---TCTATA------------------------------------TTCTGGAAG---CTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------CAACCA------------------TTTGTAGGT---TTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATA---------------TTC------TCA---GGTGAAGCTGGAACTATGGCGGCAAAA------GCT---GGTAACAAAGCTATG---TCT---ACT---GCT---TTC---AGT---GCTATG---AGAATAATCGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-RKVPT-SI------------FWK-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------QP------FVG-FVIGMAGWIYILFEI-----F--S-GEAGTMAAK--A-GNKAM-S-T-A-F-S-AM-RIIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928043 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU022_f4c59e68809c409a699d49cb89de3486 gb|KJ928043| PRGD_OTU022_f4c59e68809c409a699d49cb89de3486, putative proteorhodopsin gene, partial cds. PRGD_OTU022_f4c59e68809c409a699d49cb89de3486, putative proteorhodopsin gene, partial cds. KJ928043 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTAATCACAGTGCCACTTCAAATGATCGAATTCTATCTAATCTTGGCAGCTGTTAGAAAGGTGCCAACTTCTATATTCTGGAAGCTATTAATTGGTTCTTTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGTTATATTCAACCATTTGTAGGTTTCGTAATTGGAATGGCTGGATGGATTTATATCTTGTTTGAAATATTCTCAGGTGAAGCTGGAACAATGGCGGCAAAAGCTGGTAACAAAGCTATGTCGACTGCTTTCAGTGCTATGAGAATAATCGTAACTATT LITVPLQMIEFYLILAAVRKVPTSIFWKLLIGSLVMLIGGYLGEAGYIQPFVGFVIGMAGWIYILFEIFSGEAGTMAAKAGNKAMSTAFSAMRIIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTGCCACTTCAAATGATCGAATTCTATCTAATCTTGGCAGCT---------GTT---AGAAAGGTGCCAACT---TCTATA------------------------------------TTCTGGAAG---CTATTAATTGGTTCTTTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------CAACCA------------------TTTGTAGGT---TTCGTAATTGGAATGGCTGGATGGATTTATATCTTGTTTGAAATA---------------TTC------TCA---GGTGAAGCTGGAACAATGGCGGCAAAA------GCT---GGTAACAAAGCTATG---TCG---ACT---GCT---TTC---AGT---GCTATG---AGAATAATCGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-RKVPT-SI------------FWK-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------QP------FVG-FVIGMAGWIYILFEI-----F--S-GEAGTMAAK--A-GNKAM-S-T-A-F-S-AM-RIIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928007 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU022_0aff44f4ccfd82316a2e5ff65cc1ff99 gb|KJ928007| PRGD_OTU022_0aff44f4ccfd82316a2e5ff65cc1ff99, putative proteorhodopsin gene, partial cds. PRGD_OTU022_0aff44f4ccfd82316a2e5ff65cc1ff99, putative proteorhodopsin gene, partial cds. KJ928007 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-23.5956, 69.0419) TTAATTACAGTGCCACTTCAAATGATCGAATTCTATCTAATCTTGGCAGCTGTTAGAAAGGTGCCAACTTCTATATTCTGGAAGCTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACCTAGGTGAAGCTGGTTATATTCAACCATTTGTAGGTTTCGTAATTGGAATGGCTGGATGGATTTATATCTTGTTTGAAATATTCTCGGGTGAGGCTGGAACAATGGCGGCAAAAGCTGGTAACAAAGCTATGTCTACAGCATTCAGCGCTATGAGAATAATCGTAACAATT LITVPLQMIEFYLILAAVRKVPTSIFWKLLIGSLVMLIGGYLGEAGYIQPFVGFVIGMAGWIYILFEIFSGEAGTMAAKAGNKAMSTAFSAMRIIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCACTTCAAATGATCGAATTCTATCTAATCTTGGCAGCT---------GTT---AGAAAGGTGCCAACT---TCTATA------------------------------------TTCTGGAAG---CTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACCTAGGTGAA---------GCT------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------CAACCA------------------TTTGTAGGT---TTCGTAATTGGAATGGCTGGATGGATTTATATCTTGTTTGAAATA---------------TTC------TCG---GGTGAGGCTGGAACAATGGCGGCAAAA------GCT---GGTAACAAAGCTATG---TCT---ACA---GCA---TTC---AGC---GCTATG---AGAATAATCGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-RKVPT-SI------------FWK-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------QP------FVG-FVIGMAGWIYILFEI-----F--S-GEAGTMAAK--A-GNKAM-S-T-A-F-S-AM-RIIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928016 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU022_4b10497eac420730e80fb3913ed6f89b gb|KJ928016| PRGD_OTU022_4b10497eac420730e80fb3913ed6f89b, putative proteorhodopsin gene, partial cds. PRGD_OTU022_4b10497eac420730e80fb3913ed6f89b, putative proteorhodopsin gene, partial cds. KJ928016 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACAGTGCCACTTCAAATGATAGAATTCTATCTAATCTTGGCAGCTGTTAGAAAGGTGCCAACTTCTATATTCTGGAAGCTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGTTATATTCAACCATTTGTAGGTTTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATATTCTCAGGTGAAGCTGGAACAATGGCGGCAAAAGCTGGTAACAAAGCTATGTCTACAGCATTCAGCGCTATGAGAATAATTGTAACTATT LITVPLQMIEFYLILAAVRKVPTSIFWKLLIGSLVMLIGGYLGEAGYIQPFVGFVIGMAGWIYILFEIFSGEAGTMAAKAGNKAMSTAFSAMRIIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTGCCACTTCAAATGATAGAATTCTATCTAATCTTGGCAGCT---------GTT---AGAAAGGTGCCAACT---TCTATA------------------------------------TTCTGGAAG---CTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------CAACCA------------------TTTGTAGGT---TTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATA---------------TTC------TCA---GGTGAAGCTGGAACAATGGCGGCAAAA------GCT---GGTAACAAAGCTATG---TCT---ACA---GCA---TTC---AGC---GCTATG---AGAATAATTGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-RKVPT-SI------------FWK-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------QP------FVG-FVIGMAGWIYILFEI-----F--S-GEAGTMAAK--A-GNKAM-S-T-A-F-S-AM-RIIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928024 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU022_71e39168254f4f0134701657ac29b256 gb|KJ928024| PRGD_OTU022_71e39168254f4f0134701657ac29b256, putative proteorhodopsin gene, partial cds. PRGD_OTU022_71e39168254f4f0134701657ac29b256, putative proteorhodopsin gene, partial cds. KJ928024 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACAGTGCCACTTCAAATGATAGAATTCTATCTAATTTTGGCAGCTGTTAGAAAGGTGCCAACTTCTATATTCTGGAAGCTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGTTATATTCAACCATTTGTAGGTTTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATATTCTCAGGTGAAGCTGGAACAATGGCGGCAAAAGCTGGTAACAAGGCTATGTCTACAGCATTCAGCGCTATGAGAATAATCGTAACAATT LITVPLQMIEFYLILAAVRKVPTSIFWKLLIGSLVMLIGGYLGEAGYIQPFVGFVIGMAGWIYILFEIFSGEAGTMAAKAGNKAMSTAFSAMRIIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTGCCACTTCAAATGATAGAATTCTATCTAATTTTGGCAGCT---------GTT---AGAAAGGTGCCAACT---TCTATA------------------------------------TTCTGGAAG---CTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------CAACCA------------------TTTGTAGGT---TTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATA---------------TTC------TCA---GGTGAAGCTGGAACAATGGCGGCAAAA------GCT---GGTAACAAGGCTATG---TCT---ACA---GCA---TTC---AGC---GCTATG---AGAATAATCGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-RKVPT-SI------------FWK-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------QP------FVG-FVIGMAGWIYILFEI-----F--S-GEAGTMAAK--A-GNKAM-S-T-A-F-S-AM-RIIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928011 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU022_31c9b6111a411b6e0834f03d46bf5784 gb|KJ928011| PRGD_OTU022_31c9b6111a411b6e0834f03d46bf5784, putative proteorhodopsin gene, partial cds. PRGD_OTU022_31c9b6111a411b6e0834f03d46bf5784, putative proteorhodopsin gene, partial cds. KJ928011 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTAATCACAGTGCCACTTCAAATGATCGAATTCTATCTAATCTTGGCAGCTGTTAGAAAGGTGCCAACTTCTATATTCTGGAAGCTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGTTATATTCAACCATTTGTAGGTTTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATATTCTCAGGAGAGGCTGGAACGATGGCGGCAAAAGCTGGTAACAAAGCTATGTCTACAGCGTTCAGCGCTATGAGAATAATCGTAACTATC LITVPLQMIEFYLILAAVRKVPTSIFWKLLIGSLVMLIGGYLGEAGYIQPFVGFVIGMAGWIYILFEIFSGEAGTMAAKAGNKAMSTAFSAMRIIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTGCCACTTCAAATGATCGAATTCTATCTAATCTTGGCAGCT---------GTT---AGAAAGGTGCCAACT---TCTATA------------------------------------TTCTGGAAG---CTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------CAACCA------------------TTTGTAGGT---TTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATA---------------TTC------TCA---GGAGAGGCTGGAACGATGGCGGCAAAA------GCT---GGTAACAAAGCTATG---TCT---ACA---GCG---TTC---AGC---GCTATG---AGAATAATCGTAACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-RKVPT-SI------------FWK-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------QP------FVG-FVIGMAGWIYILFEI-----F--S-GEAGTMAAK--A-GNKAM-S-T-A-F-S-AM-RIIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928027 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU022_7c8e9a6baddc5aa4e8d280d36e42cc66 gb|KJ928027| PRGD_OTU022_7c8e9a6baddc5aa4e8d280d36e42cc66, putative proteorhodopsin gene, partial cds. PRGD_OTU022_7c8e9a6baddc5aa4e8d280d36e42cc66, putative proteorhodopsin gene, partial cds. KJ928027 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) TTAATCACAGTACCACTTCAAATGATCGAATTCTATCTAATCTTGGCAGCTGTTAGAAAGGTGCCAACTTCTATATTCTGGAAGCTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGTTACATACAACCATTCGTAGGTTTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATATTTTCAGGAGAAGCTGGAACAATGGCGGCAAAAGCTGGTAACAAGGCTATGTCAACAGCGTTCAGCGCTATGAGAATAATTGTAACTATT LITVPLQMIEFYLILAAVRKVPTSIFWKLLIGSLVMLIGGYLGEAGYIQPFVGFVIGMAGWIYILFEIFSGEAGTMAAKAGNKAMSTAFSAMRIIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTACCACTTCAAATGATCGAATTCTATCTAATCTTGGCAGCT---------GTT---AGAAAGGTGCCAACT---TCTATA------------------------------------TTCTGGAAG---CTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------CAACCA------------------TTCGTAGGT---TTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATA---------------TTT------TCA---GGAGAAGCTGGAACAATGGCGGCAAAA------GCT---GGTAACAAGGCTATG---TCA---ACA---GCG---TTC---AGC---GCTATG---AGAATAATTGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-RKVPT-SI------------FWK-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------QP------FVG-FVIGMAGWIYILFEI-----F--S-GEAGTMAAK--A-GNKAM-S-T-A-F-S-AM-RIIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928020 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU022_5eb690ccd8a5fe47f03f214b9ac9c38a gb|KJ928020| PRGD_OTU022_5eb690ccd8a5fe47f03f214b9ac9c38a, putative proteorhodopsin gene, partial cds. PRGD_OTU022_5eb690ccd8a5fe47f03f214b9ac9c38a, putative proteorhodopsin gene, partial cds. KJ928020 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) TTAATCACAGTGCCACTTCAAATGATCGAATTCTATCTAATCTTGGCAGCTGTTAGAAAGGTGCCAACTTCTATATTCTGGAAGCTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGTTATATTCAACCATTTGTAGGTTTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATATTCTCAGGAGAAGCAGGAACAATGGCGGCAAAAGCTGGTAACAAAGCTATGTCTACAGCGTTTAGTGCTATGAGAATAATCGTAACTATT LITVPLQMIEFYLILAAVRKVPTSIFWKLLIGSLVMLIGGYLGEAGYIQPFVGFVIGMAGWIYILFEIFSGEAGTMAAKAGNKAMSTAFSAMRIIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTGCCACTTCAAATGATCGAATTCTATCTAATCTTGGCAGCT---------GTT---AGAAAGGTGCCAACT---TCTATA------------------------------------TTCTGGAAG---CTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------CAACCA------------------TTTGTAGGT---TTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATA---------------TTC------TCA---GGAGAAGCAGGAACAATGGCGGCAAAA------GCT---GGTAACAAAGCTATG---TCT---ACA---GCG---TTT---AGT---GCTATG---AGAATAATCGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-RKVPT-SI------------FWK-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------QP------FVG-FVIGMAGWIYILFEI-----F--S-GEAGTMAAK--A-GNKAM-S-T-A-F-S-AM-RIIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928029 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU022_8afdf67432f509073315e52c7d4e6e0b gb|KJ928029| PRGD_OTU022_8afdf67432f509073315e52c7d4e6e0b, putative proteorhodopsin gene, partial cds. PRGD_OTU022_8afdf67432f509073315e52c7d4e6e0b, putative proteorhodopsin gene, partial cds. KJ928029 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) TTAATCACAGTGCCACTTCAAATGATCGAATTCTATCTAATCTTGGCAGCTGTTAGAAAGGTGCCAACTTCCATATTCTGGAAACTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGTTATATTCAACCATTTGTAGGTTTTGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATATTCTCAGGTGAAGCAGGAACGATGGCGGCAAAAGCTGGAAATAAAGCGATGTCCACAGCGTTCAGTGCTATGAGAATAATCGTAACTATT LITVPLQMIEFYLILAAVRKVPTSIFWKLLIGSLVMLIGGYLGEAGYIQPFVGFVIGMAGWIYILFEIFSGEAGTMAAKAGNKAMSTAFSAMRIIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTGCCACTTCAAATGATCGAATTCTATCTAATCTTGGCAGCT---------GTT---AGAAAGGTGCCAACT---TCCATA------------------------------------TTCTGGAAA---CTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------CAACCA------------------TTTGTAGGT---TTTGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATA---------------TTC------TCA---GGTGAAGCAGGAACGATGGCGGCAAAA------GCT---GGAAATAAAGCGATG---TCC---ACA---GCG---TTC---AGT---GCTATG---AGAATAATCGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-RKVPT-SI------------FWK-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------QP------FVG-FVIGMAGWIYILFEI-----F--S-GEAGTMAAK--A-GNKAM-S-T-A-F-S-AM-RIIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928015 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU022_46df90c2a34138cc2ad223f8ae681a03 gb|KJ928015| PRGD_OTU022_46df90c2a34138cc2ad223f8ae681a03, putative proteorhodopsin gene, partial cds. PRGD_OTU022_46df90c2a34138cc2ad223f8ae681a03, putative proteorhodopsin gene, partial cds. KJ928015 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACTGTGCCACTTCAAATGATCGAATTCTATCTAATCTTGGCAGCTGTTAGAAAGGTGCCAACTTCTATATTCTGGAAGCTATTAATTGGTTCATTAGTTATGTTAATCGGTGGTTACTTAGGTGAAGCTGGTTATATTCAACCATTTGTAGGTTTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATATTCTCAGGTGAAGCTGGAACAATGGCAGCAAAAGCTGGTAACAAAGCTATGTCTACAGCGTTCAGCGCAATGAGAATAATCGTGACTATT LITVPLQMIEFYLILAAVRKVPTSIFWKLLIGSLVMLIGGYLGEAGYIQPFVGFVIGMAGWIYILFEIFSGEAGTMAAKAGNKAMSTAFSAMRIIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCACTTCAAATGATCGAATTCTATCTAATCTTGGCAGCT---------GTT---AGAAAGGTGCCAACT---TCTATA------------------------------------TTCTGGAAG---CTATTAATTGGTTCATTAGTTATGTTAATCGGTGGTTACTTAGGTGAA---------GCT------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------CAACCA------------------TTTGTAGGT---TTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATA---------------TTC------TCA---GGTGAAGCTGGAACAATGGCAGCAAAA------GCT---GGTAACAAAGCTATG---TCT---ACA---GCG---TTC---AGC---GCAATG---AGAATAATCGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-RKVPT-SI------------FWK-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------QP------FVG-FVIGMAGWIYILFEI-----F--S-GEAGTMAAK--A-GNKAM-S-T-A-F-S-AM-RIIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928017 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU022_4ca6008be33b2d50020eca778f9184a0 gb|KJ928017| PRGD_OTU022_4ca6008be33b2d50020eca778f9184a0, putative proteorhodopsin gene, partial cds. PRGD_OTU022_4ca6008be33b2d50020eca778f9184a0, putative proteorhodopsin gene, partial cds. KJ928017 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAATCACTGTACCACTTCAAATGATAGAATTCTATCTAATCTTGGCAGCTGTTAGAAAGGTGCCAACTTCTATATTCTGGAAGCTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGTTATATTCAACCATTTGTAGGTTTTGTAATTGGAATGGCTGGATGGATTTATATCTTGTTTGAAATATTCTCAGGTGAAGCTGGAACAATGGCGGCAAAAGCTGGTAACAGAGCTATGTCTACAGCGTTCAGCGCTATGAGAATTATCGTAACTATC LITVPLQMIEFYLILAAVRKVPTSIFWKLLIGSLVMLIGGYLGEAGYIQPFVGFVIGMAGWIYILFEIFSGEAGTMAAKAGNRAMSTAFSAMRIIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCACTTCAAATGATAGAATTCTATCTAATCTTGGCAGCT---------GTT---AGAAAGGTGCCAACT---TCTATA------------------------------------TTCTGGAAG---CTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------CAACCA------------------TTTGTAGGT---TTTGTAATTGGAATGGCTGGATGGATTTATATCTTGTTTGAAATA---------------TTC------TCA---GGTGAAGCTGGAACAATGGCGGCAAAA------GCT---GGTAACAGAGCTATG---TCT---ACA---GCG---TTC---AGC---GCTATG---AGAATTATCGTAACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-RKVPT-SI------------FWK-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------QP------FVG-FVIGMAGWIYILFEI-----F--S-GEAGTMAAK--A-GNRAM-S-T-A-F-S-AM-RIIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928013 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU022_43fcfb43481f9b23cab8f5a0c494d658 gb|KJ928013| PRGD_OTU022_43fcfb43481f9b23cab8f5a0c494d658, putative proteorhodopsin gene, partial cds. PRGD_OTU022_43fcfb43481f9b23cab8f5a0c494d658, putative proteorhodopsin gene, partial cds. KJ928013 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATTACTGTACCTCTTCAAATGATCGAATTCTATCTAATCTTGGCAGCTGTTAGAAAGGTGCCAACTTCTATATTCTGGAAGCTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGTTATATTCAACCATTTGTAGGTTTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATATTCTCAGGTGAAGCTGGAACAATGGCGGCAAAAGCTGGTAACAAAGCTATGTCTACAGCATTCAGCGCTATGAGAATAATCGTAACTATT LITVPLQMIEFYLILAAVRKVPTSIFWKLLIGSLVMLIGGYLGEAGYIQPFVGFVIGMAGWIYILFEIFSGEAGTMAAKAGNKAMSTAFSAMRIIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCTCTTCAAATGATCGAATTCTATCTAATCTTGGCAGCT---------GTT---AGAAAGGTGCCAACT---TCTATA------------------------------------TTCTGGAAG---CTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------CAACCA------------------TTTGTAGGT---TTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATA---------------TTC------TCA---GGTGAAGCTGGAACAATGGCGGCAAAA------GCT---GGTAACAAAGCTATG---TCT---ACA---GCA---TTC---AGC---GCTATG---AGAATAATCGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-RKVPT-SI------------FWK-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------QP------FVG-FVIGMAGWIYILFEI-----F--S-GEAGTMAAK--A-GNKAM-S-T-A-F-S-AM-RIIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928037 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU022_ae8b76c6b3e59f3c2188aafb946616e2 gb|KJ928037| PRGD_OTU022_ae8b76c6b3e59f3c2188aafb946616e2, putative proteorhodopsin gene, partial cds. PRGD_OTU022_ae8b76c6b3e59f3c2188aafb946616e2, putative proteorhodopsin gene, partial cds. KJ928037 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Pacific side (72.0542, -130.8781), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATTACAGTACCACTTCAAATGATCGAATTCTATCTAATCTTGGCAGCTGTTAGAAAGGTGCCAACTTCTATATTCTGGAAGCTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACCTAGGTGAAGCTGGTTATATTCAACCATTTGTAGGTTTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATATTCTCAGGTGAAGCTGGAACAATGGCGGCAAAAGCTGGTAACAAAGCTATGTCAACAGCGTTCAGCGCTATGAGAATAATCGTAACTATT LITVPLQMIEFYLILAAVRKVPTSIFWKLLIGSLVMLIGGYLGEAGYIQPFVGFVIGMAGWIYILFEIFSGEAGTMAAKAGNKAMSTAFSAMRIIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTACCACTTCAAATGATCGAATTCTATCTAATCTTGGCAGCT---------GTT---AGAAAGGTGCCAACT---TCTATA------------------------------------TTCTGGAAG---CTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACCTAGGTGAA---------GCT------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------CAACCA------------------TTTGTAGGT---TTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATA---------------TTC------TCA---GGTGAAGCTGGAACAATGGCGGCAAAA------GCT---GGTAACAAAGCTATG---TCA---ACA---GCG---TTC---AGC---GCTATG---AGAATAATCGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-RKVPT-SI------------FWK-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------QP------FVG-FVIGMAGWIYILFEI-----F--S-GEAGTMAAK--A-GNKAM-S-T-A-F-S-AM-RIIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928006 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU022_0a0b0d91c3e92dff681eb82409199281 gb|KJ928006| PRGD_OTU022_0a0b0d91c3e92dff681eb82409199281, putative proteorhodopsin gene, partial cds. PRGD_OTU022_0a0b0d91c3e92dff681eb82409199281, putative proteorhodopsin gene, partial cds. KJ928006 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTAATTACTGTGCCACTTCAAATGATCGAATTCTATCTAATTTTGGCAGCTGTAAGAAAGGTGCCAACTTCTATATTTTGGAAGCTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGTTATATTCAACCATTTGTAGGTTTCGTGATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATATTCTCTGGTGAAGCAGGAACAATGGCGGCAAAAGCTGGTAACAAAGCTATGTCTACAGCGTTCAGCGCTATGAGAATAATCGTAACTATT LITVPLQMIEFYLILAAVRKVPTSIFWKLLIGSLVMLIGGYLGEAGYIQPFVGFVIGMAGWIYILFEIFSGEAGTMAAKAGNKAMSTAFSAMRIIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCACTTCAAATGATCGAATTCTATCTAATTTTGGCAGCT---------GTA---AGAAAGGTGCCAACT---TCTATA------------------------------------TTTTGGAAG---CTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------CAACCA------------------TTTGTAGGT---TTCGTGATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATA---------------TTC------TCT---GGTGAAGCAGGAACAATGGCGGCAAAA------GCT---GGTAACAAAGCTATG---TCT---ACA---GCG---TTC---AGC---GCTATG---AGAATAATCGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-RKVPT-SI------------FWK-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------QP------FVG-FVIGMAGWIYILFEI-----F--S-GEAGTMAAK--A-GNKAM-S-T-A-F-S-AM-RIIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928040 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU022_ee8893c7dd5a29b8fca2812528ee420a gb|KJ928040| PRGD_OTU022_ee8893c7dd5a29b8fca2812528ee420a, putative proteorhodopsin gene, partial cds. PRGD_OTU022_ee8893c7dd5a29b8fca2812528ee420a, putative proteorhodopsin gene, partial cds. KJ928040 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACTGTGCCACTTCAAATGATAGAATTCTATCTAATCTTGGCAGCTGTTAGAAAGGTGCCAACTTCTATATTCTGGAAACTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGTTATATTCAACCATTTGTAGGTTTCGTGATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATATTCTCTGGTGAAGCAGGAACTATGGCGGCAAAAGCTGGTAACAAAGCTATGTCTACAGCGTTCAGCGCTATGAGAATAATCGTAACTATT LITVPLQMIEFYLILAAVRKVPTSIFWKLLIGSLVMLIGGYLGEAGYIQPFVGFVIGMAGWIYILFEIFSGEAGTMAAKAGNKAMSTAFSAMRIIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCACTTCAAATGATAGAATTCTATCTAATCTTGGCAGCT---------GTT---AGAAAGGTGCCAACT---TCTATA------------------------------------TTCTGGAAA---CTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------CAACCA------------------TTTGTAGGT---TTCGTGATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATA---------------TTC------TCT---GGTGAAGCAGGAACTATGGCGGCAAAA------GCT---GGTAACAAAGCTATG---TCT---ACA---GCG---TTC---AGC---GCTATG---AGAATAATCGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-RKVPT-SI------------FWK-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------QP------FVG-FVIGMAGWIYILFEI-----F--S-GEAGTMAAK--A-GNKAM-S-T-A-F-S-AM-RIIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928034 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU022_9b4a30071cb8540230bc6da291e15fd3 gb|KJ928034| PRGD_OTU022_9b4a30071cb8540230bc6da291e15fd3, putative proteorhodopsin gene, partial cds. PRGD_OTU022_9b4a30071cb8540230bc6da291e15fd3, putative proteorhodopsin gene, partial cds. KJ928034 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTAATTACTGTGCCACTTCAAATGATAGAATTCTATCTAATCTTGGCAGCTGTTAGAAAGGTGCCAACTTCTATATTCTGGAAGCTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGTTATATTCAACCATTTGTAGGTTTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATATTTTCAGGAGAAGCTGGAACAATGGCGGCAAAAGCTGGTAACAAAGCTATGTCTACAGCGTTCAGCGCTATGAGAATAATCGTAACAATT LITVPLQMIEFYLILAAVRKVPTSIFWKLLIGSLVMLIGGYLGEAGYIQPFVGFVIGMAGWIYILFEIFSGEAGTMAAKAGNKAMSTAFSAMRIIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCACTTCAAATGATAGAATTCTATCTAATCTTGGCAGCT---------GTT---AGAAAGGTGCCAACT---TCTATA------------------------------------TTCTGGAAG---CTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------CAACCA------------------TTTGTAGGT---TTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATA---------------TTT------TCA---GGAGAAGCTGGAACAATGGCGGCAAAA------GCT---GGTAACAAAGCTATG---TCT---ACA---GCG---TTC---AGC---GCTATG---AGAATAATCGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-RKVPT-SI------------FWK-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------QP------FVG-FVIGMAGWIYILFEI-----F--S-GEAGTMAAK--A-GNKAM-S-T-A-F-S-AM-RIIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928008 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU022_11691a4739a415a7ea83ab62ddeaecf0 gb|KJ928008| PRGD_OTU022_11691a4739a415a7ea83ab62ddeaecf0, putative proteorhodopsin gene, partial cds. PRGD_OTU022_11691a4739a415a7ea83ab62ddeaecf0, putative proteorhodopsin gene, partial cds. KJ928008 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTAATTACTGTGCCACTTCAAATGATCGAATTCTATCTAATTTTGGCAGCTGTGAGAAAAGTGCCAACTTCTATTTTCTGGAAGCTATTAATTGGTTCTTTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGTTACATTCAACCATTTGTAGGTTTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATATTCTCAGGTGAAGCTGGAACTATGGCGGCAAAAGCTGGTAACAAAGCTATGTCTACAGCATTCAGCGCAATGAGAATAATCGTAACTATT LITVPLQMIEFYLILAAVRKVPTSIFWKLLIGSLVMLIGGYLGEAGYIQPFVGFVIGMAGWIYILFEIFSGEAGTMAAKAGNKAMSTAFSAMRIIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCACTTCAAATGATCGAATTCTATCTAATTTTGGCAGCT---------GTG---AGAAAAGTGCCAACT---TCTATT------------------------------------TTCTGGAAG---CTATTAATTGGTTCTTTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGT------TAC---------------------------------ATT------------------------------------------------------------------CAACCA------------------TTTGTAGGT---TTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATA---------------TTC------TCA---GGTGAAGCTGGAACTATGGCGGCAAAA------GCT---GGTAACAAAGCTATG---TCT---ACA---GCA---TTC---AGC---GCAATG---AGAATAATCGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-RKVPT-SI------------FWK-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------QP------FVG-FVIGMAGWIYILFEI-----F--S-GEAGTMAAK--A-GNKAM-S-T-A-F-S-AM-RIIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928032 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU022_92586fc565b72fedfb15f0ac7e3f43d0 gb|KJ928032| PRGD_OTU022_92586fc565b72fedfb15f0ac7e3f43d0, putative proteorhodopsin gene, partial cds. PRGD_OTU022_92586fc565b72fedfb15f0ac7e3f43d0, putative proteorhodopsin gene, partial cds. KJ928032 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATCACTGTGCCACTTCAAATGATCGAATTCTATCTAATATTGGCAGCGGTAAGAAAAGTGCCAACTTCTATTTTCTGGAAGCTATTAATTGGTTCATTAATAATGTTAATCGGCGGATACCTAGGTGAAGCTGGTTACATTCAACCATTTGTAGGTTTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATATTCTCAGGTGAAGCTGGAACTATGGCGGCAAAAGCTGGTAACAAAGCTATGTCTACTGCGTTCAGCGCAATGAGAATAATCGTAACTATC LITVPLQMIEFYLILAAVRKVPTSIFWKLLIGSLIMLIGGYLGEAGYIQPFVGFVIGMAGWIYILFEIFSGEAGTMAAKAGNKAMSTAFSAMRIIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCACTTCAAATGATCGAATTCTATCTAATATTGGCAGCG---------GTA---AGAAAAGTGCCAACT---TCTATT------------------------------------TTCTGGAAG---CTATTAATTGGTTCATTAATAATGTTAATCGGCGGATACCTAGGTGAA---------GCT------------------GGT------TAC---------------------------------ATT------------------------------------------------------------------CAACCA------------------TTTGTAGGT---TTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATA---------------TTC------TCA---GGTGAAGCTGGAACTATGGCGGCAAAA------GCT---GGTAACAAAGCTATG---TCT---ACT---GCG---TTC---AGC---GCAATG---AGAATAATCGTAACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-RKVPT-SI------------FWK-LLIGSLIMLIGGYLGE---A------G--Y-----------I----------------------QP------FVG-FVIGMAGWIYILFEI-----F--S-GEAGTMAAK--A-GNKAM-S-T-A-F-S-AM-RIIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928030 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU022_8bb15c4acf6bdc57be93b6647bce46f2 gb|KJ928030| PRGD_OTU022_8bb15c4acf6bdc57be93b6647bce46f2, putative proteorhodopsin gene, partial cds. PRGD_OTU022_8bb15c4acf6bdc57be93b6647bce46f2, putative proteorhodopsin gene, partial cds. KJ928030 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTAATCACAGTTCCACTTCAAATGATCGAATTCTATCTAATCTTGGCAGCTGTTAGAAAGGTGCCAACTTCTATATTCTGGAAGCTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGTTACATACAACCATTTGTAGGTTTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATATTCTCAGGTGAAGCTGGAACAATGGCTGCCAAAGCTGGAAATAAAGCTATGGCAACTGCATTCAGCGCAATGAGAATAATTGTAACTATT LITVPLQMIEFYLILAAVRKVPTSIFWKLLIGSLVMLIGGYLGEAGYIQPFVGFVIGMAGWIYILFEIFSGEAGTMAAKAGNKAMATAFSAMRIIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTTCCACTTCAAATGATCGAATTCTATCTAATCTTGGCAGCT---------GTT---AGAAAGGTGCCAACT---TCTATA------------------------------------TTCTGGAAG---CTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------CAACCA------------------TTTGTAGGT---TTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATA---------------TTC------TCA---GGTGAAGCTGGAACAATGGCTGCCAAA------GCT---GGAAATAAAGCTATG---GCA---ACT---GCA---TTC---AGC---GCAATG---AGAATAATTGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-RKVPT-SI------------FWK-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------QP------FVG-FVIGMAGWIYILFEI-----F--S-GEAGTMAAK--A-GNKAM-A-T-A-F-S-AM-RIIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928036 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU022_9e50080a6a425e9f11241411862f39ec gb|KJ928036| PRGD_OTU022_9e50080a6a425e9f11241411862f39ec, putative proteorhodopsin gene, partial cds. PRGD_OTU022_9e50080a6a425e9f11241411862f39ec, putative proteorhodopsin gene, partial cds. KJ928036 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-14.48, 113.45) TTAATTACTGTGCCACTTCAAATGATAGAATTCTATCTAATCTTGGCAGCTGTTAGAAAGGTGCCAACTTCTATATTCTGGAAGCTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGTTATATACAACCATTTGTAGGTTTTGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATATTCTCAGGTGAAGCTGGAACTATGGCAGCTAAAGCTGGTAACAAAGCTATGGCAACTGCATTCAGCGCAATGAGAATAATTGTAACTATT LITVPLQMIEFYLILAAVRKVPTSIFWKLLIGSLVMLIGGYLGEAGYIQPFVGFVIGMAGWIYILFEIFSGEAGTMAAKAGNKAMATAFSAMRIIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCACTTCAAATGATAGAATTCTATCTAATCTTGGCAGCT---------GTT---AGAAAGGTGCCAACT---TCTATA------------------------------------TTCTGGAAG---CTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGT------TAT---------------------------------ATA------------------------------------------------------------------CAACCA------------------TTTGTAGGT---TTTGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATA---------------TTC------TCA---GGTGAAGCTGGAACTATGGCAGCTAAA------GCT---GGTAACAAAGCTATG---GCA---ACT---GCA---TTC---AGC---GCAATG---AGAATAATTGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-RKVPT-SI------------FWK-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------QP------FVG-FVIGMAGWIYILFEI-----F--S-GEAGTMAAK--A-GNKAM-A-T-A-F-S-AM-RIIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928014 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU022_452f660d126d1e2b0b818d1aa89fb0c7 gb|KJ928014| PRGD_OTU022_452f660d126d1e2b0b818d1aa89fb0c7, putative proteorhodopsin gene, partial cds. PRGD_OTU022_452f660d126d1e2b0b818d1aa89fb0c7, putative proteorhodopsin gene, partial cds. KJ928014 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), Indian Ocean (-14.48, 113.45) TTAATTACTGTGCCACTTCAAATGATCGAATTCTATCTAATTTTGGCAGCTGTAAGAAAGGTGCCAACGTCTATATTTTGGAAGCTATTAATTGGTTCATTAGTGATGTTAATCGGTGGATACTTAGGTGAAGCTGGTTACATTCAACCATTTGTAGGTTTCGTAATTGGAATGGCTGGATGGATTTATATCTTGTTTGAAATATTCTCAGGTGAAGCTGGAACTTTAGCAGCAAAAGCTGGTAATAAGGCTATGACTACTGCTTTCAGTGCAATGAGAATAATTGTAACTATT LITVPLQMIEFYLILAAVRKVPTSIFWKLLIGSLVMLIGGYLGEAGYIQPFVGFVIGMAGWIYILFEIFSGEAGTLAAKAGNKAMTTAFSAMRIIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCACTTCAAATGATCGAATTCTATCTAATTTTGGCAGCT---------GTA---AGAAAGGTGCCAACG---TCTATA------------------------------------TTTTGGAAG---CTATTAATTGGTTCATTAGTGATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGT------TAC---------------------------------ATT------------------------------------------------------------------CAACCA------------------TTTGTAGGT---TTCGTAATTGGAATGGCTGGATGGATTTATATCTTGTTTGAAATA---------------TTC------TCA---GGTGAAGCTGGAACTTTAGCAGCAAAA------GCT---GGTAATAAGGCTATG---ACT---ACT---GCT---TTC---AGT---GCAATG---AGAATAATTGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-RKVPT-SI------------FWK-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------QP------FVG-FVIGMAGWIYILFEI-----F--S-GEAGTLAAK--A-GNKAM-T-T-A-F-S-AM-RIIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928038 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU022_b8b6eae2207a1c7a9e09e74d019d979a gb|KJ928038| PRGD_OTU022_b8b6eae2207a1c7a9e09e74d019d979a, putative proteorhodopsin gene, partial cds. PRGD_OTU022_b8b6eae2207a1c7a9e09e74d019d979a, putative proteorhodopsin gene, partial cds. KJ928038 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Pacific side (70.9139, -128.9264), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAATTACTGTGCCACTTCAAATGATCGAATTCTATCTAATTTTGGCAGCTGTAAGAAAGGTGCCAACGTCTATATTCTGGAAGCTATTAATTGGTTCATTAGTGATGTTAATCGGTGGATACTTAGGTGAAGCTGGTTATATCCAACCATTTGTAGGTTTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATATTCTCAGGTGAAGCTGGAACATTAGCTGCAAAAGCGGGTAATAAAGCTATGACTACTGCTTTCAGTGCAATGAGAATAATTGTAACTATT LITVPLQMIEFYLILAAVRKVPTSIFWKLLIGSLVMLIGGYLGEAGYIQPFVGFVIGMAGWIYILFEIFSGEAGTLAAKAGNKAMTTAFSAMRIIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCACTTCAAATGATCGAATTCTATCTAATTTTGGCAGCT---------GTA---AGAAAGGTGCCAACG---TCTATA------------------------------------TTCTGGAAG---CTATTAATTGGTTCATTAGTGATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------CAACCA------------------TTTGTAGGT---TTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATA---------------TTC------TCA---GGTGAAGCTGGAACATTAGCTGCAAAA------GCG---GGTAATAAAGCTATG---ACT---ACT---GCT---TTC---AGT---GCAATG---AGAATAATTGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-RKVPT-SI------------FWK-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------QP------FVG-FVIGMAGWIYILFEI-----F--S-GEAGTLAAK--A-GNKAM-T-T-A-F-S-AM-RIIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928010 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU022_2a075e15738464aecd009c5b7fec4b97 gb|KJ928010| PRGD_OTU022_2a075e15738464aecd009c5b7fec4b97, putative proteorhodopsin gene, partial cds. PRGD_OTU022_2a075e15738464aecd009c5b7fec4b97, putative proteorhodopsin gene, partial cds. KJ928010 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATAACAGTTCCACTTCAAATGGTAGAATTCTATCTAATCTTGGCAGCTGTGAGAAAAGTGCCAAGCTCAATATTCTGGAAACTATTAATTGGTTCTTTAGTAATGTTAATCGGTGGTTACCTAGGTGAAGCTGGTTATATTCAACCATTTGTAGGTTTCGTAATCGGAATGGCGGGATGGATTTATATCTTGTTTGAAATATTCTCAGGTGAAGCAGGCACAATGGCTGCAAAAACTGGAAACAGAGCAATGACTACTGCTTTCAGTGCAATGAGAATAATCGTAACTATC LITVPLQMVEFYLILAAVRKVPSSIFWKLLIGSLVMLIGGYLGEAGYIQPFVGFVIGMAGWIYILFEIFSGEAGTMAAKTGNRAMTTAFSAMRIIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTTCCACTTCAAATGGTAGAATTCTATCTAATCTTGGCAGCT---------GTG---AGAAAAGTGCCAAGC---TCAATA------------------------------------TTCTGGAAA---CTATTAATTGGTTCTTTAGTAATGTTAATCGGTGGTTACCTAGGTGAA---------GCT------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------CAACCA------------------TTTGTAGGT---TTCGTAATCGGAATGGCGGGATGGATTTATATCTTGTTTGAAATA---------------TTC------TCA---GGTGAAGCAGGCACAATGGCTGCAAAA------ACT---GGAAACAGAGCAATG---ACT---ACT---GCT---TTC---AGT---GCAATG---AGAATAATCGTAACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-RKVPS-SI------------FWK-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------QP------FVG-FVIGMAGWIYILFEI-----F--S-GEAGTMAAK--T-GNRAM-T-T-A-F-S-AM-RIIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928042 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU022_f29f1d8fee306f2fb0d0b78b85bc2aae gb|KJ928042| PRGD_OTU022_f29f1d8fee306f2fb0d0b78b85bc2aae, putative proteorhodopsin gene, partial cds. PRGD_OTU022_f29f1d8fee306f2fb0d0b78b85bc2aae, putative proteorhodopsin gene, partial cds. KJ928042 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937), Indian Ocean (-23.5956, 69.0419) TTAATAACTGTTCCACTTCAAATGGTAGAATTCTATCTAATCTTGGCAGCAGTAAGAAAAGTGCCAACATCAATATTCTGGAAACTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGTTATATTCAACCGTTTGTAGGTTTCGTAATCGGAATGGCTGGATGGATCTACATCTTGTTTGAAATATTCTCAGGTGAGGCAGGAACATTAGCTGCTAAAACTGGAAACAGAGCAATGACGACTGCTTTCAGTGCTATGAGAATAATCGTAACTATC LITVPLQMVEFYLILAAVRKVPTSIFWKLLIGSLVMLIGGYLGEAGYIQPFVGFVIGMAGWIYILFEIFSGEAGTLAAKTGNRAMTTAFSAMRIIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACTGTTCCACTTCAAATGGTAGAATTCTATCTAATCTTGGCAGCA---------GTA---AGAAAAGTGCCAACA---TCAATA------------------------------------TTCTGGAAA---CTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------CAACCG------------------TTTGTAGGT---TTCGTAATCGGAATGGCTGGATGGATCTACATCTTGTTTGAAATA---------------TTC------TCA---GGTGAGGCAGGAACATTAGCTGCTAAA------ACT---GGAAACAGAGCAATG---ACG---ACT---GCT---TTC---AGT---GCTATG---AGAATAATCGTAACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-RKVPT-SI------------FWK-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------QP------FVG-FVIGMAGWIYILFEI-----F--S-GEAGTLAAK--T-GNRAM-T-T-A-F-S-AM-RIIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928028 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU022_8434f5d454ad583271bc4254448f50a0 gb|KJ928028| PRGD_OTU022_8434f5d454ad583271bc4254448f50a0, putative proteorhodopsin gene, partial cds. PRGD_OTU022_8434f5d454ad583271bc4254448f50a0, putative proteorhodopsin gene, partial cds. KJ928028 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACCGTTCCACTTCAAATGGTAGAATTCTATCTAATCTTGGCAGCTGTAAGAAAGGTGCCAACTTCTATATTCTGGAAATTATTAATTGGTTCATTAGTAATGTTAATCGGTGGTTACCTAGGTGAAGCTGGTTACATACAACCATTTGTAGGTTTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATATTCTCAGGTGAAGCAGGAACGTTGGCTGCTAAAACTGGAAACAGAGCAATGACTACTGCTTTCAGTGCTATGAGAATCATCGTAACTATC LITVPLQMVEFYLILAAVRKVPTSIFWKLLIGSLVMLIGGYLGEAGYIQPFVGFVIGMAGWIYILFEIFSGEAGTLAAKTGNRAMTTAFSAMRIIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACCGTTCCACTTCAAATGGTAGAATTCTATCTAATCTTGGCAGCT---------GTA---AGAAAGGTGCCAACT---TCTATA------------------------------------TTCTGGAAA---TTATTAATTGGTTCATTAGTAATGTTAATCGGTGGTTACCTAGGTGAA---------GCT------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------CAACCA------------------TTTGTAGGT---TTCGTAATTGGAATGGCTGGATGGATTTACATCTTGTTTGAAATA---------------TTC------TCA---GGTGAAGCAGGAACGTTGGCTGCTAAA------ACT---GGAAACAGAGCAATG---ACT---ACT---GCT---TTC---AGT---GCTATG---AGAATCATCGTAACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-RKVPT-SI------------FWK-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------QP------FVG-FVIGMAGWIYILFEI-----F--S-GEAGTLAAK--T-GNRAM-T-T-A-F-S-AM-RIIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928023 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU022_6df306368adae2b13379daedc54e349d gb|KJ928023| PRGD_OTU022_6df306368adae2b13379daedc54e349d, putative proteorhodopsin gene, partial cds. PRGD_OTU022_6df306368adae2b13379daedc54e349d, putative proteorhodopsin gene, partial cds. KJ928023 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACTGTGCCACTACAAATGGTAGAATTCTATCTAATCTTGGCAGCCGTAAGAAAGGTGCCAACTTCTATATTCTGGAAACTATTAATTGGTTCTTTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGTTACATACAACCATTCGTAGGTTTCGTAATTGGAATGGCTGGATGGATCTACATCTTGTTTGAAATATTCTCAGGTGAAGCTGGAACTGCAGCTGCCAAGTCTGGTAACAAGGCTATGTCAACTGCGTTTAGCGCAATGAGAATTATCGTAACAATA LITVPLQMVEFYLILAAVRKVPTSIFWKLLIGSLVMLIGGYLGEAGYIQPFVGFVIGMAGWIYILFEIFSGEAGTAAAKSGNKAMSTAFSAMRIIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCACTACAAATGGTAGAATTCTATCTAATCTTGGCAGCC---------GTA---AGAAAGGTGCCAACT---TCTATA------------------------------------TTCTGGAAA---CTATTAATTGGTTCTTTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------CAACCA------------------TTCGTAGGT---TTCGTAATTGGAATGGCTGGATGGATCTACATCTTGTTTGAAATA---------------TTC------TCA---GGTGAAGCTGGAACTGCAGCTGCCAAG------TCT---GGTAACAAGGCTATG---TCA---ACT---GCG---TTT---AGC---GCAATG---AGAATTATCGTAACAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-RKVPT-SI------------FWK-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------QP------FVG-FVIGMAGWIYILFEI-----F--S-GEAGTAAAK--S-GNKAM-S-T-A-F-S-AM-RIIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928021 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU022_5f5b1ee12a60785ee390f60987993eb7 gb|KJ928021| PRGD_OTU022_5f5b1ee12a60785ee390f60987993eb7, putative proteorhodopsin gene, partial cds. PRGD_OTU022_5f5b1ee12a60785ee390f60987993eb7, putative proteorhodopsin gene, partial cds. KJ928021 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATCACTGTGCCACTTCAAATGGTAGAATTCTATCTAATCTTGGCAGCAGTAAGAAAAGTGCCAAGCTCTATATTCTGGAAACTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGTTACATTCAACCATTTGTAGGTTTCGTAATTGGAATGGCTGGATGGATCTACATCTTGTTTGAAATATTCTCAGGTGAAGCAGGTCAATTAGCTGCAAAAGCTGGTAACAGAGCTATGAGCACAGCGTTCAGTGCTATGAGAATAATCGTAACTATT LITVPLQMVEFYLILAAVRKVPSSIFWKLLIGSLVMLIGGYLGEAGYIQPFVGFVIGMAGWIYILFEIFSGEAGQLAAKAGNRAMSTAFSAMRIIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCACTTCAAATGGTAGAATTCTATCTAATCTTGGCAGCA---------GTA---AGAAAAGTGCCAAGC---TCTATA------------------------------------TTCTGGAAA---CTATTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGT------TAC---------------------------------ATT------------------------------------------------------------------CAACCA------------------TTTGTAGGT---TTCGTAATTGGAATGGCTGGATGGATCTACATCTTGTTTGAAATA---------------TTC------TCA---GGTGAAGCAGGTCAATTAGCTGCAAAA------GCT---GGTAACAGAGCTATG---AGC---ACA---GCG---TTC---AGT---GCTATG---AGAATAATCGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-RKVPS-SI------------FWK-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------QP------FVG-FVIGMAGWIYILFEI-----F--S-GEAGQLAAK--A-GNRAM-S-T-A-F-S-AM-RIIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928041 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU022_efaad5c33d0a08046a7a37cab4e7e106 gb|KJ928041| PRGD_OTU022_efaad5c33d0a08046a7a37cab4e7e106, putative proteorhodopsin gene, partial cds. PRGD_OTU022_efaad5c33d0a08046a7a37cab4e7e106, putative proteorhodopsin gene, partial cds. KJ928041 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na GTAATCACTGTTCCACTTCAAATGATAGAATTCTATTTGATCTTGGCTGCTGTAAGAAAAGTACCAAGTTCAATATTCTGGAAACTATTAATTGGTTCATTAGTTATGTTAATCGGTGGTTACATGGGAGAAGCCGGATACATAGCACCATTCGTAGGTTTCATAATTGGAATGGCTGGTTGGATTTACATATTATTTGAAATCTTTTCTGGTGAAGCAGGTCAATTAGCTGCAAAAGGCGGAAATAAAGCTATGACAACTGCATTTAGTGCAATGAGAATCATCGTTACTATT VITVPLQMIEFYLILAAVRKVPSSIFWKLLIGSLVMLIGGYMGEAGYIAPFVGFIIGMAGWIYILFEIFSGEAGQLAAKGGNKAMTTAFSAMRIIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAATCACTGTTCCACTTCAAATGATAGAATTCTATTTGATCTTGGCTGCT---------GTA---AGAAAAGTACCAAGT---TCAATA------------------------------------TTCTGGAAA---CTATTAATTGGTTCATTAGTTATGTTAATCGGTGGTTACATGGGAGAA---------GCC------------------GGA------TAC---------------------------------ATA------------------------------------------------------------------GCACCA------------------TTCGTAGGT---TTCATAATTGGAATGGCTGGTTGGATTTACATATTATTTGAAATC---------------TTT------TCT---GGTGAAGCAGGTCAATTAGCTGCAAAA------GGC---GGAAATAAAGCTATG---ACA---ACT---GCA---TTT---AGT---GCAATG---AGAATCATCGTTACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VITVPLQMIEFYLILAA---V-RKVPS-SI------------FWK-LLIGSLVMLIGGYMGE---A------G--Y-----------I----------------------AP------FVG-FIIGMAGWIYILFEI-----F--S-GEAGQLAAK--G-GNKAM-T-T-A-F-S-AM-RIIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928018 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU022_4fc1cfd1043872a73369833f068fd1d7 gb|KJ928018| PRGD_OTU022_4fc1cfd1043872a73369833f068fd1d7, putative proteorhodopsin gene, partial cds. PRGD_OTU022_4fc1cfd1043872a73369833f068fd1d7, putative proteorhodopsin gene, partial cds. KJ928018 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTGCCGTTACTAATGCTTGAGTTCTATTTTGTATTAGCAGCTGTGAAAAAAGTACCAAGTTCTGTATTCTGGAAACTTTTAATTGGTTCTTTAGTAATGCTTATAGGTGGTTACCTAGGTGAAGCTGGTTACATGCAACCATTTGTTGGTTTTGTAATCGGAATGGCTGGCTGGATATATATTTTATTTGAAATATTTTCTGGTGAAGCTGGAACGCTTGCAGCGAAAGCTGGTAACAAGTCATTACAAACTGCATTCAGTGCAATGAGAATAATTGTTACAATA LITVPLLMLEFYFVLAAVKKVPSSVFWKLLIGSLVMLIGGYLGEAGYMQPFVGFVIGMAGWIYILFEIFSGEAGTLAAKAGNKSLQTAFSAMRIIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCGTTACTAATGCTTGAGTTCTATTTTGTATTAGCAGCT---------GTG---AAAAAAGTACCAAGT---TCTGTA------------------------------------TTCTGGAAA---CTTTTAATTGGTTCTTTAGTAATGCTTATAGGTGGTTACCTAGGTGAA---------GCT------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------CAACCA------------------TTTGTTGGT---TTTGTAATCGGAATGGCTGGCTGGATATATATTTTATTTGAAATA---------------TTT------TCT---GGTGAAGCTGGAACGCTTGCAGCGAAA------GCT---GGTAACAAGTCATTA---CAA---ACT---GCA---TTC---AGT---GCAATG---AGAATAATTGTTACAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-KKVPS-SV------------FWK-LLIGSLVMLIGGYLGE---A------G--Y-----------M----------------------QP------FVG-FVIGMAGWIYILFEI-----F--S-GEAGTLAAK--A-GNKSL-Q-T-A-F-S-AM-RIIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928026 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU022_790025049fb8975e89bab4aa5b433042 gb|KJ928026| PRGD_OTU022_790025049fb8975e89bab4aa5b433042, putative proteorhodopsin gene, partial cds. PRGD_OTU022_790025049fb8975e89bab4aa5b433042, putative proteorhodopsin gene, partial cds. KJ928026 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATCACAGTGCCACTACTAATGCTTGAGTTCTACTTTGTATTAGCGGCAGTGAAAAAAGTACCTAGCTCAGTATTCTGGAAACTTTTAATAGGTTCTTTAGTAATGCTTATAGGTGGTTACCTAGGTGAAGCTGGTTACATGCAACCATTTGTTGGTTTTGTAATCGGAATGGCTGGCTGGATATACATTCTATTCGAAGTATTTTCTGGTGAAGCTGGAACATTAGCAGCTAAAGCTGGTAATAAGTCATTACAAACTGCATTTAGTGCAATGAGAATAATAGTTACAATC LITVPLLMLEFYFVLAAVKKVPSSVFWKLLIGSLVMLIGGYLGEAGYMQPFVGFVIGMAGWIYILFEVFSGEAGTLAAKAGNKSLQTAFSAMRIIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTGCCACTACTAATGCTTGAGTTCTACTTTGTATTAGCGGCA---------GTG---AAAAAAGTACCTAGC---TCAGTA------------------------------------TTCTGGAAA---CTTTTAATAGGTTCTTTAGTAATGCTTATAGGTGGTTACCTAGGTGAA---------GCT------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------CAACCA------------------TTTGTTGGT---TTTGTAATCGGAATGGCTGGCTGGATATACATTCTATTCGAAGTA---------------TTT------TCT---GGTGAAGCTGGAACATTAGCAGCTAAA------GCT---GGTAATAAGTCATTA---CAA---ACT---GCA---TTT---AGT---GCAATG---AGAATAATAGTTACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-KKVPS-SV------------FWK-LLIGSLVMLIGGYLGE---A------G--Y-----------M----------------------QP------FVG-FVIGMAGWIYILFEV-----F--S-GEAGTLAAK--A-GNKSL-Q-T-A-F-S-AM-RIIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ929850 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU301_otuREP_4b3e13520d9748a4f3e1ff75cddf7405 gb|KJ929850| PRGD_OTU301_otuREP_4b3e13520d9748a4f3e1ff75cddf7405, putative proteorhodopsin gene, partial cds. PRGD_OTU301_otuREP_4b3e13520d9748a4f3e1ff75cddf7405, putative proteorhodopsin gene, partial cds. KJ929850 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) TTATTAACTGTTCCATTACAGATGTTAGAGTTTTACTTTATTCTTTCAGCTGTACGTAAAGTTCCAACTGGAATTTTCTGGAGATTATTAATCGGTACAGTAGTTATGCTTGCAGCTGGTTACTTAGGTGAAGCTGGCATGATTAACCCAACAGCTGGTTTCGTAGTAGGAATGGCTGGATGGATATACATTCTGTATGAAATCTTTGCAGGTGAAGCAGGTACAATTGCGAGCAAGATGAGAGGTCCAGGCGCAGAAGCATTTAATTTCTGTAAGTGGGTCGTAACTATC LLTVPLQMLEFYFILSAVRKVPTGIFWRLLIGTVVMLAAGYLGEAGMINPTAGFVVGMAGWIYILYEIFAGEAGTIASKMRGPGAEAFNFCKWVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACTGTTCCATTACAGATGTTAGAGTTTTACTTTATTCTTTCAGCT---------GTA---CGTAAAGTTCCAACT---GGAATT------------------------------------TTCTGGAGA---TTATTAATCGGTACAGTAGTTATGCTTGCAGCTGGTTACTTAGGTGAA---------GCT------------------GGC------ATG---------------------------------ATT------------------------------------------------------------------AACCCA------------------ACAGCTGGT---TTCGTAGTAGGAATGGCTGGATGGATATACATTCTGTATGAAATC---------------TTT------GCA---GGTGAAGCAGGTACA---ATTGCGAGC------AAG---ATGAGAGGTCCAGGC---GCA---GAA---GCA---TTT---AAT---TTCTGT---AAGTGGGTCGTAACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMLEFYFILSA---V-RKVPT-GI------------FWR-LLIGTVVMLAAGYLGE---A------G--M-----------I----------------------NP------TAG-FVVGMAGWIYILYEI-----F--A-GEAGT-IAS--K-MRGPG-A-E-A-F-N-FC-KWVVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ929918 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU369_otuREP_1e5b793851a234b033c0ce63ca8ef03a gb|KJ929918| PRGD_OTU369_otuREP_1e5b793851a234b033c0ce63ca8ef03a, putative proteorhodopsin gene, partial cds. PRGD_OTU369_otuREP_1e5b793851a234b033c0ce63ca8ef03a, putative proteorhodopsin gene, partial cds. KJ929918 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175) TTAATTACTGTGCCTCTACAAATCGTAGAGTTTTATTTAATCCTTTCTGCCGTGAATAAAGTTCCTGGCTCAATGTTCTGGAGACTTTTAGTAGCATCACTAGTTATGTTAGTGTTTGGATACCTTGGAGAAGCTGGATACATGTCAGCTCTATTTGCTTTTATTATTGCAACAGCTGCATGGATATACATTTTGTTTGAATTATTTTCAGGCGCCGCTGGTAAAGCAATGAAGAAAAGCGGTAACAAAGCTATGAAAACTGCTTTTACTGCAATGAGAATGATTGTAACAGTT LITVPLQIVEFYLILSAVNKVPGSMFWRLLVASLVMLVFGYLGEAGYMSALFAFIIATAAWIYILFELFSGAAGKAMKKSGNKAMKTAFTAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCTCTACAAATCGTAGAGTTTTATTTAATCCTTTCTGCC---------GTG---AATAAAGTTCCTGGC---TCAATG------------------------------------TTCTGGAGA---CTTTTAGTAGCATCACTAGTTATGTTAGTGTTTGGATACCTTGGAGAA---------GCT------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------TCAGCT------------------CTATTTGCT---TTTATTATTGCAACAGCTGCATGGATATACATTTTGTTTGAATTA---------------TTT------TCA---GGCGCCGCTGGTAAAGCAATGAAGAAA------AGC---GGTAACAAAGCTATG---AAA---ACT---GCT---TTT---ACT---GCAATG---AGAATGATTGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILSA---V-NKVPG-SM------------FWR-LLVASLVMLVFGYLGE---A------G--Y-----------M----------------------SA------LFA-FIIATAAWIYILFEL-----F--S-GAAGKAMKK--S-GNKAM-K-T-A-F-T-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ929795 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU249_b6b0ca0292083cec2376c5c315b49b8d gb|KJ929795| PRGD_OTU249_b6b0ca0292083cec2376c5c315b49b8d, putative proteorhodopsin gene, partial cds. PRGD_OTU249_b6b0ca0292083cec2376c5c315b49b8d, putative proteorhodopsin gene, partial cds. KJ929795 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683) TTTATTACAGTACCACTGCAAATCATCGAATTTTATTTTGTGCTTTTAGCAGCGAAAGTTGCATTGTCGAGTAATACATTCTGGAATTTATTGATCGCATCATTTTTGATGTTATTCTTTGGATATTTAGGTGAAGGTGGATACATAAATCCATTCGTGGGTTTTGTGGCAGGCATGTTCGCTTGGTTTTACATACTCTACCAACTATTTGCTGGTGTCATTGCAAAAGAATCTGCTAAATGTGACAAAAGCGTCGTTTCTGCTATATCTGCAATGCGTTTAATCGTAACAATT FITVPLQIIEFYFVLLAAKVALSSNTFWNLLIASFLMLFFGYLGEGGYINPFVGFVAGMFAWFYILYQLFAGVIAKESAKCDKSVVSAISAMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATTACAGTACCACTGCAAATCATCGAATTTTATTTTGTGCTTTTAGCA---------GCGAAAGTTGCATTGTCGAGT---AATACA------------------------------------TTCTGGAAT---TTATTGATCGCATCATTTTTGATGTTATTCTTTGGATATTTAGGTGAA---------GGT------------------GGA------TAC---------------------------------ATA------------------------------------------------------------------AATCCA------------------TTCGTGGGT---TTTGTGGCAGGCATGTTCGCTTGGTTTTACATACTCTACCAACTA---------------TTT------------------GCTGGTGTCATTGCAAAAGAATCTGCTAAA---TGTGACAAAAGCGTC---GTT---TCT---GCT---ATA---TCT---GCAATG---CGTTTAATCGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIIEFYFVLLA---AKVALSS-NT------------FWN-LLIASFLMLFFGYLGE---G------G--Y-----------I----------------------NP------FVG-FVAGMFAWFYILYQL-----F------AGVIAKESAK-CDKSV-V-S-A-I-S-AM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ929794 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU249_otuREP_d852ebe5cf6e5df06dca76dc5b27657e gb|KJ929794| PRGD_OTU249_otuREP_d852ebe5cf6e5df06dca76dc5b27657e, putative proteorhodopsin gene, partial cds. PRGD_OTU249_otuREP_d852ebe5cf6e5df06dca76dc5b27657e, putative proteorhodopsin gene, partial cds. KJ929794 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-33.28, 45.35) TTTATTACAGTACCACTGCAAATCATCGAATTTTATTTTGTGCTTTTAGCAGCGAAAGTTGCATTGTCGAGTAATACATTCTGGAATTTATTGATCGCATCATTTTTGATGTTATTCTTTGGATATTTAGGTGAAGCTGGATACATAAATCCATTCGTGGGTTTTGTGGCAGGCATGTTCGCTTGGTTTTACATACTCTACCAACTATTTGCTGGTGTCATTGCAAGAGAATCTGCTAAATGTGACAAAAGTGTCATTTCTGCTATATCTGCAATGCGTTTAATCGTAACAGTT FITVPLQIIEFYFVLLAAKVALSSNTFWNLLIASFLMLFFGYLGEAGYINPFVGFVAGMFAWFYILYQLFAGVIARESAKCDKSVISAISAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATTACAGTACCACTGCAAATCATCGAATTTTATTTTGTGCTTTTAGCA---------GCGAAAGTTGCATTGTCGAGT---AATACA------------------------------------TTCTGGAAT---TTATTGATCGCATCATTTTTGATGTTATTCTTTGGATATTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATA------------------------------------------------------------------AATCCA------------------TTCGTGGGT---TTTGTGGCAGGCATGTTCGCTTGGTTTTACATACTCTACCAACTA---------------TTT------------------GCTGGTGTCATTGCAAGAGAATCTGCTAAA---TGTGACAAAAGTGTC---ATT---TCT---GCT---ATA---TCT---GCAATG---CGTTTAATCGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIIEFYFVLLA---AKVALSS-NT------------FWN-LLIASFLMLFFGYLGE---A------G--Y-----------I----------------------NP------FVG-FVAGMFAWFYILYQL-----F------AGVIARESAK-CDKSV-I-S-A-I-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ929919 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU370_otuREP_fee506e0a803361ab396099637f1f13a gb|KJ929919| PRGD_OTU370_otuREP_fee506e0a803361ab396099637f1f13a, putative proteorhodopsin gene, partial cds. PRGD_OTU370_otuREP_fee506e0a803361ab396099637f1f13a, putative proteorhodopsin gene, partial cds. KJ929919 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTCCTGACAGTGCCATTACAAATAATAGAGTTTTATCTAGTTCTTTCCGTTGATCAAGATGTGCCTCAGTCACTTTTAGCTACTTTATTAGGCGCTTCGGTGATTATGATACTCTTTGGGTTTTTAGGAGAGACTGGTAGAATACCAAAGACTGTTGGTTTCGCGGTTGGTATGCTTGCATGGGGATACATCGTTTATGAAGTTTTCTTTGGAACTGGTGCTAAATTCGAACAAAAAAGTAAAGATGAATCAGTCAAAATGGCATTCAACGCGATGAGATGGATCGTCACTGTG FLTVPLQIIEFYLVLSVDQDVPQSLLATLLGASVIMILFGFLGETGRIPKTVGFAVGMLAWGYIVYEVFFGTGAKFEQKSKDESVKMAFNAMRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCTGACAGTGCCATTACAAATAATAGAGTTTTATCTAGTTCTTTCCGTT---------GAT---CAAGATGTGCCTCAG---TCACTT------------------------------------TTAGCTACT---TTATTAGGCGCTTCGGTGATTATGATACTCTTTGGGTTTTTAGGAGAG---------ACT------------------GGT------AGA---------------------------------ATA------------------------------------------------------------------CCAAAG------------------ACTGTTGGT---TTCGCGGTTGGTATGCTTGCATGGGGATACATCGTTTATGAAGTT---------------TTC------TTT---GGAACTGGTGCTAAATTCGAACAAAAA------AGT---AAAGATGAATCAGTC---AAA---ATG---GCA---TTC---AAC---GCGATG---AGATGGATCGTCACTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FLTVPLQIIEFYLVLSV---D-QDVPQ-SL------------LAT-LLGASVIMILFGFLGE---T------G--R-----------I----------------------PK------TVG-FAVGMLAWGYIVYEV-----F--F-GTGAKFEQK--S-KDESV-K-M-A-F-N-AM-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928916 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU061_otuREP_6efb895d3e0f34d75c468f8206b4cff5 gb|KJ928916| PRGD_OTU061_otuREP_6efb895d3e0f34d75c468f8206b4cff5, putative proteorhodopsin gene, partial cds. PRGD_OTU061_otuREP_6efb895d3e0f34d75c468f8206b4cff5, putative proteorhodopsin gene, partial cds. KJ928916 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCGATAAGAAAAGTACCTTCAGGAATTTTCTGGAGATTACTAATCGGATCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGTTACATCAACGCTACACTTGGTTTCGTAATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTCTCAGGTGAAGCTGGAAAAGCAGCATCTAAAAGTGGTAACAAAGCACTTGTTACAGCTTTCGGTGCAATGAGAATGATCGTAACAATC LITVPLQMIEFYLILAAIRKVPSGIFWRLLIGSVVMLVGGYLGEAGYINATLGFVIGMAGWIYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCG---------ATA---AGAAAAGTACCTTCA---GGAATT------------------------------------TTCTGGAGA---TTACTAATCGGATCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCGTAATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCAGCATCTAAA------AGT---GGTAACAAAGCACTT---GTT---ACA---GCT---TTC---GGT---GCAATG---AGAATGATCGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---I-RKVPS-GI------------FWR-LLIGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928927 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU061_adb8c6dfecddc6e60862db3f09d31a7c gb|KJ928927| PRGD_OTU061_adb8c6dfecddc6e60862db3f09d31a7c, putative proteorhodopsin gene, partial cds. PRGD_OTU061_adb8c6dfecddc6e60862db3f09d31a7c, putative proteorhodopsin gene, partial cds. KJ928927 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508) TTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCGATAAGAAAAGTACCTTCAGGAATTTTCTGGAGATTACTAATCGGATCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGTTACATCAACGCTACACTTGGTTTCGTAATCGGTATGGCTGGATGGATTTACATCTTATATGAAGTATTCTCAGGTGAAGCTGGTAAAGCAGCATCTAAGAGTGGTAACAAAGCACTTGTTACAGCTTTCGGTGCAATGAGAATGATAGTAACAATC LITVPLQMIEFYLILAAIRKVPSGIFWRLLIGSVVMLVGGYLGEAGYINATLGFVIGMAGWIYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATATTAGCAGCG---------ATA---AGAAAAGTACCTTCA---GGAATT------------------------------------TTCTGGAGA---TTACTAATCGGATCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCGTAATCGGTATGGCTGGATGGATTTACATCTTATATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCAGCATCTAAG------AGT---GGTAACAAAGCACTT---GTT---ACA---GCT---TTC---GGT---GCAATG---AGAATGATAGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---I-RKVPS-GI------------FWR-LLIGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928926 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU061_ad014179b1031c35921311b15ff32743 gb|KJ928926| PRGD_OTU061_ad014179b1031c35921311b15ff32743, putative proteorhodopsin gene, partial cds. PRGD_OTU061_ad014179b1031c35921311b15ff32743, putative proteorhodopsin gene, partial cds. KJ928926 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATACTAGCAGCGATCAGAAAAGTACCTTCAGGAATTTTCTGGAGATTACTAATCGGATCAGTAGTAATGCTAGTAGGAGGATACTTAGGAGAAGCAGGTTACATCCCACCTATGGTAGGTTTCGTAGTAGGTATGGCTGGATGGATCTACATCTTATTTGAAGTATTCTCAGGTGAAGCTGGTAAAGCAGCATCTAAGAGTGGTAACAAAGCACTTGTTACAGCTTTCGGTGCGATGAGGATGATAGTAACAATT LITVPLQMIEFYLILAAIRKVPSGIFWRLLIGSVVMLVGGYLGEAGYIPPMVGFVVGMAGWIYILFEVFSGEAGKAASKSGNKALVTAFGAMRMIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTACCGTTACAAATGATTGAGTTTTATCTAATACTAGCAGCG---------ATC---AGAAAAGTACCTTCA---GGAATT------------------------------------TTCTGGAGA---TTACTAATCGGATCAGTAGTAATGCTAGTAGGAGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------CCACCT------------------ATGGTAGGT---TTCGTAGTAGGTATGGCTGGATGGATCTACATCTTATTTGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCAGCATCTAAG------AGT---GGTAACAAAGCACTT---GTT---ACA---GCT---TTC---GGT---GCGATG---AGGATGATAGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---I-RKVPS-GI------------FWR-LLIGSVVMLVGGYLGE---A------G--Y-----------I----------------------PP------MVG-FVVGMAGWIYILFEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928922 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU061_7efe0cb3167d1282e137f7e9b08538bb gb|KJ928922| PRGD_OTU061_7efe0cb3167d1282e137f7e9b08538bb, putative proteorhodopsin gene, partial cds. PRGD_OTU061_7efe0cb3167d1282e137f7e9b08538bb, putative proteorhodopsin gene, partial cds. KJ928922 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTAATCACTGTGCCATTACAGATGATTGAATTCTATTTAATTCTTGCAGCTGTAAGAAAAGTACCAGGTGGTATCTTCTGGAGATTATTAATTGGATCTTTAGTGATGCTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACGCACTACTTGGTTTCATAATCGGTATGGCTGGATGGTTCTACATCTTATATGAAGTATTCTCAGGTGAAGCTGGTAAAGCGGCGGCTAAAAGTGGTAACAAAGGTTTGTCAACTGCATTTAGCGCAATGAGAATGATCGTAACAATA LITVPLQMIEFYLILAAVRKVPGGIFWRLLIGSLVMLIGGYLGEAGYINALLGFIIGMAGWFYILYEVFSGEAGKAAAKSGNKGLSTAFSAMRMIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACTGTGCCATTACAGATGATTGAATTCTATTTAATTCTTGCAGCT---------GTA---AGAAAAGTACCAGGT---GGTATC------------------------------------TTCTGGAGA---TTATTAATTGGATCTTTAGTGATGCTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCA------------------CTACTTGGT---TTCATAATCGGTATGGCTGGATGGTTCTACATCTTATATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCGGCGGCTAAA------AGT---GGTAACAAAGGTTTG---TCA---ACT---GCA---TTT---AGC---GCAATG---AGAATGATCGTAACAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-RKVPG-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------LLG-FIIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKGL-S-T-A-F-S-AM-RMIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928919 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU061_2e78bfba0d438831d4b378247bbc40ae gb|KJ928919| PRGD_OTU061_2e78bfba0d438831d4b378247bbc40ae, putative proteorhodopsin gene, partial cds. PRGD_OTU061_2e78bfba0d438831d4b378247bbc40ae, putative proteorhodopsin gene, partial cds. KJ928919 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATCACTGTGCCACTACAGATGATTGAATTTTATTTAATTCTTGCAGCTGTAAGAAAAGTACCAGGTGGTATCTTCTGGAGATTATTAATTGGATCTTTAGTGATGCTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACGCACTACTTGGTTTCATAATTGGTATGGCTGGATGGTTCTACATCTTATATGAAGTATTCTCAGGTGAAGCTGGTAAAGCAGCAGCTAAAAGCGGTAACAAAGGTTTGTCTACTGCATTTGGCGCAATGAGAATGATCGTAACAATA LITVPLQMIEFYLILAAVRKVPGGIFWRLLIGSLVMLIGGYLGEAGYINALLGFIIGMAGWFYILYEVFSGEAGKAAAKSGNKGLSTAFGAMRMIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACTGTGCCACTACAGATGATTGAATTTTATTTAATTCTTGCAGCT---------GTA---AGAAAAGTACCAGGT---GGTATC------------------------------------TTCTGGAGA---TTATTAATTGGATCTTTAGTGATGCTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCA------------------CTACTTGGT---TTCATAATTGGTATGGCTGGATGGTTCTACATCTTATATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCAGCAGCTAAA------AGC---GGTAACAAAGGTTTG---TCT---ACT---GCA---TTT---GGC---GCAATG---AGAATGATCGTAACAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-RKVPG-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------LLG-FIIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKGL-S-T-A-F-G-AM-RMIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928929 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU061_d526042eac9f43d6360fc94b527fc318 gb|KJ928929| PRGD_OTU061_d526042eac9f43d6360fc94b527fc318, putative proteorhodopsin gene, partial cds. PRGD_OTU061_d526042eac9f43d6360fc94b527fc318, putative proteorhodopsin gene, partial cds. KJ928929 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTAATCACTGTGCCACTACAGATGATTGAATTCTATTTAATTCTTGCAGCTGTAAGAAAAGTACCAGGTGGTATTTTCTGGAGATTGTTAATTGGATCTTTAGTGATGCTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACGCACTACTTGGTTTCATAATCGGTATGGCTGGATGGTTCTACATCTTATATGAAGTATTCTCAGGTGAAGCTGGTAAAGCAGCAGCTAAAAGTGGTAACAAAGGTTTGTCTACTGCATTTGGTGCAATGAGAATGATCGTAACAATT LITVPLQMIEFYLILAAVRKVPGGIFWRLLIGSLVMLIGGYLGEAGYINALLGFIIGMAGWFYILYEVFSGEAGKAAAKSGNKGLSTAFGAMRMIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACTGTGCCACTACAGATGATTGAATTCTATTTAATTCTTGCAGCT---------GTA---AGAAAAGTACCAGGT---GGTATT------------------------------------TTCTGGAGA---TTGTTAATTGGATCTTTAGTGATGCTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCA------------------CTACTTGGT---TTCATAATCGGTATGGCTGGATGGTTCTACATCTTATATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCAGCAGCTAAA------AGT---GGTAACAAAGGTTTG---TCT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-RKVPG-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------LLG-FIIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKGL-S-T-A-F-G-AM-RMIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928924 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU061_83adc72f06a0eacc935e828aa8089395 gb|KJ928924| PRGD_OTU061_83adc72f06a0eacc935e828aa8089395, putative proteorhodopsin gene, partial cds. PRGD_OTU061_83adc72f06a0eacc935e828aa8089395, putative proteorhodopsin gene, partial cds. KJ928924 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) CTAATCACTGTGCCATTACAGATGATTGAATTCTATTTAATTCTTGCAGCTGTAAGAAAAGTACCAGGTGGTATTTTCTGGAGATTGTTAATTGGATCTTTAGTAATGCTAATTGGTGGATACTTAGGAGAAGCAGGATACATCAACGCACTACTTGGTTTCATTATCGGTATGGCTGGATGGTTCTACATCTTGTATGAAGTGTTCTCAGGTGAAGCTGGTAAAGCGGCAGCTAAAAGTGGTAACAAAGGTTTGTCTACTGCATTTGGCGCAATGAGAATGATCGTAACAATT LITVPLQMIEFYLILAAVRKVPGGIFWRLLIGSLVMLIGGYLGEAGYINALLGFIIGMAGWFYILYEVFSGEAGKAAAKSGNKGLSTAFGAMRMIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACTGTGCCATTACAGATGATTGAATTCTATTTAATTCTTGCAGCT---------GTA---AGAAAAGTACCAGGT---GGTATT------------------------------------TTCTGGAGA---TTGTTAATTGGATCTTTAGTAATGCTAATTGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCA------------------CTACTTGGT---TTCATTATCGGTATGGCTGGATGGTTCTACATCTTGTATGAAGTG---------------TTC------TCA---GGTGAAGCTGGTAAAGCGGCAGCTAAA------AGT---GGTAACAAAGGTTTG---TCT---ACT---GCA---TTT---GGC---GCAATG---AGAATGATCGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-RKVPG-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------LLG-FIIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKGL-S-T-A-F-G-AM-RMIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928918 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU061_1e982a5781a91bf1bde6479fc72fbead gb|KJ928918| PRGD_OTU061_1e982a5781a91bf1bde6479fc72fbead, putative proteorhodopsin gene, partial cds. PRGD_OTU061_1e982a5781a91bf1bde6479fc72fbead, putative proteorhodopsin gene, partial cds. KJ928918 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Arctic Ocean-Pacific side (72.0542, -130.8781), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTAATCACTGTACCACTACAGATGATTGAATTCTATTTAATTCTTGCAGCTGTAAGAAAAGTTCCTGGTGGAATTTTCTGGAGACTGTTAATCGGATCTTTAGTTATGTTGATCGGTGGATACTTAGGAGAAGCAGGGTATATCAATGCTCTTCTTGGTTTCATAATCGGTATGGCTGGATGGTTATACATTCTTTATGAAGTATTCTCTGGTGAAGCTGGAAAAGCAGCAGCTAAAAGTGGTAACAAAGGTTTGTCTACTGCATTTGGCGCGATGAGAATGATCGTAACAATC LITVPLQMIEFYLILAAVRKVPGGIFWRLLIGSLVMLIGGYLGEAGYINALLGFIIGMAGWLYILYEVFSGEAGKAAAKSGNKGLSTAFGAMRMIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACTGTACCACTACAGATGATTGAATTCTATTTAATTCTTGCAGCT---------GTA---AGAAAAGTTCCTGGT---GGAATT------------------------------------TTCTGGAGA---CTGTTAATCGGATCTTTAGTTATGTTGATCGGTGGATACTTAGGAGAA---------GCA------------------GGG------TAT---------------------------------ATC------------------------------------------------------------------AATGCT------------------CTTCTTGGT---TTCATAATCGGTATGGCTGGATGGTTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCTGGAAAAGCAGCAGCTAAA------AGT---GGTAACAAAGGTTTG---TCT---ACT---GCA---TTT---GGC---GCGATG---AGAATGATCGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-RKVPG-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------LLG-FIIGMAGWLYILYEV-----F--S-GEAGKAAAK--S-GNKGL-S-T-A-F-G-AM-RMIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ928928 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU061_d0e27081c06026341c2da0c0287c1cc2 gb|KJ928928| PRGD_OTU061_d0e27081c06026341c2da0c0287c1cc2, putative proteorhodopsin gene, partial cds. PRGD_OTU061_d0e27081c06026341c2da0c0287c1cc2, putative proteorhodopsin gene, partial cds. KJ928928 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) TTAATTACTGTGCCATTACAAATGATAGAATTCTATTTAATTCTAGCAGCTGTAAGAAAAGTACCTTCAGGAATATTCTGGAGACTTTTAATTGGTTCATTAGTAATGCTAGTTGGAGGATACATGGGAGAAGCAGGTTACATCAATTCTATGCTTGGTTTTATTATAGGTATGGCTGGATGGATCTACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGTTGCAGCAAAAAGTGGAAACAAGGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTAACAGTA LITVPLQMIEFYLILAAVRKVPSGIFWRLLIGSLVMLVGGYMGEAGYINSMLGFIIGMAGWIYILYEVFSGEAGKVAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCATTACAAATGATAGAATTCTATTTAATTCTAGCAGCT---------GTA---AGAAAAGTACCTTCA---GGAATA------------------------------------TTCTGGAGA---CTTTTAATTGGTTCATTAGTAATGCTAGTTGGAGGATACATGGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATTCT------------------ATGCTTGGT---TTTATTATAGGTATGGCTGGATGGATCTACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGTTGCAGCAAAA------AGT---GGAAACAAGGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-RKVPS-GI------------FWR-LLIGSLVMLVGGYMGE---A------G--Y-----------I----------------------NS------MLG-FIIGMAGWIYILYEV-----F--S-GEAGKVAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926246 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_0a47b871fa3ed68b67ee9ce906e5f3c2 gb|KJ926246| PRGD_OTU001a_0a47b871fa3ed68b67ee9ce906e5f3c2, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_0a47b871fa3ed68b67ee9ce906e5f3c2, putative proteorhodopsin gene, partial cds. KJ926246 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTAATTACTGTTCCATTGCAGATGGTAGAATTCTACTTAATCCTAGTAGCAGTAAGAAAAGTTCCGTCAGGAATTTTCTGGAGACTGTTAATTGGATCATTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGGTATACATTCTATATGAAGTATTCTCAGGTGAAGCAGGAAAAGCTGCTGCAAAAAGTGGTAACAAAGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTT LITVPLQMVEFYLILVAVRKVPSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTTCCATTGCAGATGGTAGAATTCTACTTAATCCTAGTAGCA---------GTA---AGAAAAGTTCCGTCA---GGAATT------------------------------------TTCTGGAGA---CTGTTAATTGGATCATTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGGTATACATTCTATATGAAGTA---------------TTC------TCA---GGTGAAGCAGGAAAAGCTGCTGCAAAA------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILVA---V-RKVPS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926288 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_daf3427445b44c63db1c5d3c8b6ae343 gb|KJ926288| PRGD_OTU001a_daf3427445b44c63db1c5d3c8b6ae343, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_daf3427445b44c63db1c5d3c8b6ae343, putative proteorhodopsin gene, partial cds. KJ926288 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-33.28, 45.35) CTAATTACTGTTCCACTGCAAATGGTTGAATTCTACTTAATATTAGTAGCAGTAAGAAAAGTTCCATCAGGAATTTTCTGGAGACTGTTAATTGGATCATTAGTAATGTTAATTGGTGGATATCTTGGAGAGGCTGGATACATCAACGCTACACTAGGTTTCGTAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCTGGTGAAGCAGGAAAAGCTGCAGCAAAAAGTGGTAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILVAVRKVPSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTTCCACTGCAAATGGTTGAATTCTACTTAATATTAGTAGCA---------GTA---AGAAAAGTTCCATCA---GGAATT------------------------------------TTCTGGAGA---CTGTTAATTGGATCATTAGTAATGTTAATTGGTGGATATCTTGGAGAG---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCGTAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCT---GGTGAAGCAGGAAAAGCTGCAGCAAAA------AGT---GGTAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILVA---V-RKVPS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926271 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_96194418f4089ccb3641a9ea3d0189be gb|KJ926271| PRGD_OTU001a_96194418f4089ccb3641a9ea3d0189be, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_96194418f4089ccb3641a9ea3d0189be, putative proteorhodopsin gene, partial cds. KJ926271 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACTGTGCCATTACAGATGATAGAATTTTACTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATTTTCTGGAGATTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGCGAAGCTGGAAAAGCTGCCGCTAAAAGCGGAAATAAAAATCTAGCAACGGCATTCGGTGCAATGAGAATGATTGTTACCGTA LITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKNLATAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCATTACAGATGATAGAATTTTACTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGCGAAGCTGGAAAAGCTGCCGCTAAA------AGC---GGAAATAAAAATCTA---GCA---ACG---GCA---TTC---GGT---GCAATG---AGAATGATTGTTACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKNL-A-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926284 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_cfda36a4e8dc9b8e42031c60be88ac24 gb|KJ926284| PRGD_OTU001a_cfda36a4e8dc9b8e42031c60be88ac24, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_cfda36a4e8dc9b8e42031c60be88ac24, putative proteorhodopsin gene, partial cds. KJ926284 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACTGTGCCATTACAGATGATAGAGTTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGTATTTTCTGGAGATTGTTAATAGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAATAAAGCTCTTGTAACTGCATTCAGTGCAATGAGAATGATTGTAACTGTA LITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFSAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGTATT------------------------------------TTCTGGAGA---TTGTTAATAGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAATAAAGCTCTT---GTA---ACT---GCA---TTC---AGT---GCAATG---AGAATGATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-S-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926272 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_9d6986cf28d8da7a2e9026881ea38d25 gb|KJ926272| PRGD_OTU001a_9d6986cf28d8da7a2e9026881ea38d25, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_9d6986cf28d8da7a2e9026881ea38d25, putative proteorhodopsin gene, partial cds. KJ926272 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; ; 67.49, -168.12) TTAATCACTGTACCATTACTGATGATAGAATTTTATCTTGTTCTAGCAGCAGTAGGTAAAGCAAATTCTGGAATATTCTGGAGATTGTTAATTGGAACAATTGTGATGCTACTTGGTGGATACTTTGGAGAAGCAGGATACATTAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTTTCAGGTGAAGCAGGTAAAGCTGCAGCAAAAAGTGGAAACAAAGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTT LITVPLLMIEFYLVLAAVGKANSGIFWRLLIGTIVMLLGGYFGEAGYINATLGFVIGMAGWFYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCATTACTGATGATAGAATTTTATCTTGTTCTAGCAGCA---------GTA---GGTAAAGCAAATTCT---GGAATA------------------------------------TTCTGGAGA---TTGTTAATTGGAACAATTGTGATGCTACTTGGTGGATACTTTGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTT------TCA---GGTGAAGCAGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLVLAA---V-GKANS-GI------------FWR-LLIGTIVMLLGGYFGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926252 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_317fa609fe8fcf8ca5ea2534ee9c7921 gb|KJ926252| PRGD_OTU001a_317fa609fe8fcf8ca5ea2534ee9c7921, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_317fa609fe8fcf8ca5ea2534ee9c7921, putative proteorhodopsin gene, partial cds. KJ926252 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; ; 67.49, -168.12), English Channel (48.7717, -3.9683) TTAATCACTGTACCATTACTGATGATAGAATTTTACCTAGTTCTAGCAGCTGTAGGAAAAGCAAATTCTGGAATATTCTGGAGATTGTTAATTGGAACAATTGTGATGCTACTTGGTGGATACTTTGGAGAAGCAGGATACATTAACGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTTTCAGGTGAAGCAGGTAAAGCTGCAGCAAAAAGTGGAAACAAAGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTT LITVPLLMIEFYLVLAAVGKANSGIFWRLLIGTIVMLLGGYFGEAGYINATLGFVIGMAGWFYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCATTACTGATGATAGAATTTTACCTAGTTCTAGCAGCT---------GTA---GGAAAAGCAAATTCT---GGAATA------------------------------------TTCTGGAGA---TTGTTAATTGGAACAATTGTGATGCTACTTGGTGGATACTTTGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTT------TCA---GGTGAAGCAGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLVLAA---V-GKANS-GI------------FWR-LLIGTIVMLLGGYFGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926258 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_668234106463d368952890ea85b158e2 gb|KJ926258| PRGD_OTU001a_668234106463d368952890ea85b158e2, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_668234106463d368952890ea85b158e2, putative proteorhodopsin gene, partial cds. KJ926258 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), Indian Ocean (-23.5956, 69.0419) TTAATCACTGTACCATTACTGATGATAGAATTTTATCTTGTTCTAGCAGCAGTAGGTAAAGCAAATTCTGGAATATTCTGGAGATTGTTAATTGGTACTGTAGTAATGCTACTTGGTGGATATTTAGGAGAAGCAGGATACATTAACGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGAAAAGCTGCAGCAAAAAGTGGAAACAAAGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTT LITVPLLMIEFYLVLAAVGKANSGIFWRLLIGTVVMLLGGYLGEAGYINATLGFVIGMAGWFYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCATTACTGATGATAGAATTTTATCTTGTTCTAGCAGCA---------GTA---GGTAAAGCAAATTCT---GGAATA------------------------------------TTCTGGAGA---TTGTTAATTGGTACTGTAGTAATGCTACTTGGTGGATATTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGAAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLVLAA---V-GKANS-GI------------FWR-LLIGTVVMLLGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926262 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_777a678ddfee050a541308c53f601be1 gb|KJ926262| PRGD_OTU001a_777a678ddfee050a541308c53f601be1, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_777a678ddfee050a541308c53f601be1, putative proteorhodopsin gene, partial cds. KJ926262 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12) TTAATCACTGTACCATTACTGATGATAGAATTTTATCTTGTCCTAGCAGCAGTAGGTAAAGCAAATTCTGGAATATTCTGGAGATTGTTAATTGGTACTGTAGTAATGCTACTTGGTGGATACCTAGGAGAAGCAGGATACATTAACGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTTTCAGGTGAAGCAGGAAAAGCTGCAGCAAAAAGTGGAAACAAAGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTT LITVPLLMIEFYLVLAAVGKANSGIFWRLLIGTVVMLLGGYLGEAGYINATLGFVIGMAGWFYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCATTACTGATGATAGAATTTTATCTTGTCCTAGCAGCA---------GTA---GGTAAAGCAAATTCT---GGAATA------------------------------------TTCTGGAGA---TTGTTAATTGGTACTGTAGTAATGCTACTTGGTGGATACCTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTT------TCA---GGTGAAGCAGGAAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLVLAA---V-GKANS-GI------------FWR-LLIGTVVMLLGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926283 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_c9138ba5cc7f032d756cb0422664cde8 gb|KJ926283| PRGD_OTU001a_c9138ba5cc7f032d756cb0422664cde8, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_c9138ba5cc7f032d756cb0422664cde8, putative proteorhodopsin gene, partial cds. KJ926283 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) TTAATCACTGTGCCATTACTTATGATAGAATTTTACCTTGTTCTAGCAGCAGTAGGTAAAGCAAATTCTGGAATATTCTGGAGATTGTTAATTGGAACAGTTGTGATGCTTTTAGGTGGATACCTTGGAGAAGCAGGATACATTAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCTGGTGAAGCGGGAAAAGCTGCAGCAAAAAGTGGAAACAAAGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTT LITVPLLMIEFYLVLAAVGKANSGIFWRLLIGTVVMLLGGYLGEAGYINATLGFVIGMAGWFYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACTTATGATAGAATTTTACCTTGTTCTAGCAGCA---------GTA---GGTAAAGCAAATTCT---GGAATA------------------------------------TTCTGGAGA---TTGTTAATTGGAACAGTTGTGATGCTTTTAGGTGGATACCTTGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCGGGAAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLVLAA---V-GKANS-GI------------FWR-LLIGTVVMLLGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926260 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_6aeadd4948c0e2bdb37c94e5bc877b8b gb|KJ926260| PRGD_OTU001a_6aeadd4948c0e2bdb37c94e5bc877b8b, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_6aeadd4948c0e2bdb37c94e5bc877b8b, putative proteorhodopsin gene, partial cds. KJ926260 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185) TTAATCACTGTGCCATTACTTATGATAGAATTTTACCTTGTTCTAGCAGCAGTAGGTAAAGCAAATTCTGGAATATTCTGGAGATTGTTAATTGGAACAGTTGTGATGCTTGTAGGTGGATACTTAGGAGAAGCAGGATACATTAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTTTCAGGTGAAGCAGGTAAAGCTGCAGCAAAAAGTGGAAACAAAGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTT LITVPLLMIEFYLVLAAVGKANSGIFWRLLIGTVVMLVGGYLGEAGYINATLGFVIGMAGWFYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACTTATGATAGAATTTTACCTTGTTCTAGCAGCA---------GTA---GGTAAAGCAAATTCT---GGAATA------------------------------------TTCTGGAGA---TTGTTAATTGGAACAGTTGTGATGCTTGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTT------TCA---GGTGAAGCAGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLVLAA---V-GKANS-GI------------FWR-LLIGTVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926286 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_d183731a59569aa9b189ae134dff5459 gb|KJ926286| PRGD_OTU001a_d183731a59569aa9b189ae134dff5459, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_d183731a59569aa9b189ae134dff5459, putative proteorhodopsin gene, partial cds. KJ926286 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683) TTAATCACTGTGCCATTACTGATGATAGAATTTTACCTTGTTCTAGCAGCAGTAGGTAAAGCAAATTCTGGAATATTCTGGAGATTGTTAATTGGAACAGTTGTGATGCTTGTAGGTGGATACTTAGGAGAAGCAGGATACATTAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTTTCAGGTGAAGCAGGAAAAGCTGCAGCAAAAAGTGGAAACAAAGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTT LITVPLLMIEFYLVLAAVGKANSGIFWRLLIGTVVMLVGGYLGEAGYINATLGFVIGMAGWFYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACTGATGATAGAATTTTACCTTGTTCTAGCAGCA---------GTA---GGTAAAGCAAATTCT---GGAATA------------------------------------TTCTGGAGA---TTGTTAATTGGAACAGTTGTGATGCTTGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTT------TCA---GGTGAAGCAGGAAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLVLAA---V-GKANS-GI------------FWR-LLIGTVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926248 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_21bbc1f6b4efbcd18256baa766a728e0 gb|KJ926248| PRGD_OTU001a_21bbc1f6b4efbcd18256baa766a728e0, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_21bbc1f6b4efbcd18256baa766a728e0, putative proteorhodopsin gene, partial cds. KJ926248 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833) TTAATCACTGTACCATTACTTATGATAGAATTTTACCTTGTTCTAGCAGCAGTAGGTAAAGCAAATTCTGGAATGTTCTGGAGACTGTTAATTGGAACAGTTGTGATGCTTGTAGGTGGATACTTAGGAGAAGCAGGATACATTAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTATATTCTTTATGAAGTATTCTCAGGTGAAGCAGGGAAAGCTGCAGCAAAAAGTGGAAACAAAGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTT LITVPLLMIEFYLVLAAVGKANSGMFWRLLIGTVVMLVGGYLGEAGYINATLGFVIGMAGWFYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCATTACTTATGATAGAATTTTACCTTGTTCTAGCAGCA---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---CTGTTAATTGGAACAGTTGTGATGCTTGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTATATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGGAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLVLAA---V-GKANS-GM------------FWR-LLIGTVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926247 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_182e393ed15fe11504134884f5e735fa gb|KJ926247| PRGD_OTU001a_182e393ed15fe11504134884f5e735fa, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_182e393ed15fe11504134884f5e735fa, putative proteorhodopsin gene, partial cds. KJ926247 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175; 33.935, 18.508), Indian Ocean (-23.5956, 69.0419) TTAATCACTGTGCCATTACTGATGATAGAATTTTACCTTGTTCTAGCAGCAGTAGGTAAAGCAAATTCTGGAATATTCTGGAGATTGTTAATTGGAACAGTTGTGATGCTTGTAGGTGGATACTTAGGAGAAGCAGGATACATTAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGAAAAGCTGCAGCAAAAAGTGGAAACAAAGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTT LITVPLLMIEFYLVLAAVGKANSGIFWRLLIGTVVMLVGGYLGEAGYINATLGFVIGMAGWFYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACTGATGATAGAATTTTACCTTGTTCTAGCAGCA---------GTA---GGTAAAGCAAATTCT---GGAATA------------------------------------TTCTGGAGA---TTGTTAATTGGAACAGTTGTGATGCTTGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGAAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLVLAA---V-GKANS-GI------------FWR-LLIGTVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926265 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_800ce445d600661e7a71e45a197e4d6c gb|KJ926265| PRGD_OTU001a_800ce445d600661e7a71e45a197e4d6c, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_800ce445d600661e7a71e45a197e4d6c, putative proteorhodopsin gene, partial cds. KJ926265 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATCACTGTGCCATTACTAATGATAGAATTTTACCTTGTTCTAGCGGCAGTAGGTAAAGCAAATTCTGGAATATTCTGGAGATTGTTAATTGGAACAGTTGTGATGCTTTTAGGTGGATACTTAGGAGAAGCAGGATACATTAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAAGCTGCAGCAAAAAGTGGAAACAAAGCTCTTGTTACCGCATTTGGTGCAATGAGAATGATCGTTACAGTT LITVPLLMIEFYLVLAAVGKANSGIFWRLLIGTVVMLLGGYLGEAGYINATLGFVIGMAGWFYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACTAATGATAGAATTTTACCTTGTTCTAGCGGCA---------GTA---GGTAAAGCAAATTCT---GGAATA------------------------------------TTCTGGAGA---TTGTTAATTGGAACAGTTGTGATGCTTTTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACC---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLVLAA---V-GKANS-GI------------FWR-LLIGTVVMLLGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926255 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_3ff5eea6bf68c8968c5b9e7214fe824a gb|KJ926255| PRGD_OTU001a_3ff5eea6bf68c8968c5b9e7214fe824a, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_3ff5eea6bf68c8968c5b9e7214fe824a, putative proteorhodopsin gene, partial cds. KJ926255 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12) TTAATCACTGTACCATTACTAATGATAGAATTTTACCTTGTTCTAGCGGCGGTAGGAAAAGCAAATTCTGGAATATTCTGGAGATTGTTAATTGGAACGGTTGTAATGCTTGTAGGTGGATACTTAGGAGAATCGGGATACATTAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGAAAAGCTGCAGCAAAAAGTGGAAACAAAGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTT LITVPLLMIEFYLVLAAVGKANSGIFWRLLIGTVVMLVGGYLGESGYINATLGFVIGMAGWFYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCATTACTAATGATAGAATTTTACCTTGTTCTAGCGGCG---------GTA---GGAAAAGCAAATTCT---GGAATA------------------------------------TTCTGGAGA---TTGTTAATTGGAACGGTTGTAATGCTTGTAGGTGGATACTTAGGAGAA---------TCG------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGAAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLVLAA---V-GKANS-GI------------FWR-LLIGTVVMLVGGYLGE---S------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926276 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_a89c36dbe230b826c248b7227dc66e3f gb|KJ926276| PRGD_OTU001a_a89c36dbe230b826c248b7227dc66e3f, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_a89c36dbe230b826c248b7227dc66e3f, putative proteorhodopsin gene, partial cds. KJ926276 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683) TTAATCACTGTACCATTGCTAATGATAGAATTTTATCTAATTCTAGCAGCAGTAGGAAAAGCAAATTCTGGAATATTCTGGAGATTGTTAATTGGAACAGTTGTGATGCTTGTAGGTGGATACCTAGGAGAAGCAGGATACATTAACGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGAAAAGCTGCAGCAAAAAGTGGAAACAAAGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTT LITVPLLMIEFYLILAAVGKANSGIFWRLLIGTVVMLVGGYLGEAGYINATLGFVIGMAGWFYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCATTGCTAATGATAGAATTTTATCTAATTCTAGCAGCA---------GTA---GGAAAAGCAAATTCT---GGAATA------------------------------------TTCTGGAGA---TTGTTAATTGGAACAGTTGTGATGCTTGTAGGTGGATACCTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGAAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILAA---V-GKANS-GI------------FWR-LLIGTVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926290 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_e48ca61c69af128eb397ce201c3f1727 gb|KJ926290| PRGD_OTU001a_e48ca61c69af128eb397ce201c3f1727, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_e48ca61c69af128eb397ce201c3f1727, putative proteorhodopsin gene, partial cds. KJ926290 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185) TTAATTACTGTACCATTACTAATGATAGAATTTTACCTAATTCTAGCAGCAGTAGGAAAAGCAAATTCTGGAATATTCTGGAGATTGTTAATTGGAACAGTTGTGATGCTTGTAGGTGGATACCTAGGAGAAGCAGGATACATTAATGCTACGCTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGAAAAGCTGCAGCAAAAAGTGGAAACAAAGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTT LITVPLLMIEFYLILAAVGKANSGIFWRLLIGTVVMLVGGYLGEAGYINATLGFVIGMAGWFYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCATTACTAATGATAGAATTTTACCTAATTCTAGCAGCA---------GTA---GGAAAAGCAAATTCT---GGAATA------------------------------------TTCTGGAGA---TTGTTAATTGGAACAGTTGTGATGCTTGTAGGTGGATACCTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACGCTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGAAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILAA---V-GKANS-GI------------FWR-LLIGTVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926293 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_f350133d5b130427f730705af84551e8 gb|KJ926293| PRGD_OTU001a_f350133d5b130427f730705af84551e8, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_f350133d5b130427f730705af84551e8, putative proteorhodopsin gene, partial cds. KJ926293 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781) TTAATCACTGTACCATTACTAATGATAGAATTTTACCTAATTCTAGCAGCTGTAGGAAAAGCAAATTCTGGAATATTCTGGAGATTGTTAATTGGAACAGTTGTGATGCTTGTAGGTGGATACCTAGGAGAAGCAGGATACATTAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGAAAAGCTGCGGCAAAAAGTGGAAACAAAGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTT LITVPLLMIEFYLILAAVGKANSGIFWRLLIGTVVMLVGGYLGEAGYINATLGFVIGMAGWFYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCATTACTAATGATAGAATTTTACCTAATTCTAGCAGCT---------GTA---GGAAAAGCAAATTCT---GGAATA------------------------------------TTCTGGAGA---TTGTTAATTGGAACAGTTGTGATGCTTGTAGGTGGATACCTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGAAAAGCTGCGGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILAA---V-GKANS-GI------------FWR-LLIGTVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926244 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_otuREP_1b08e77b9e57e00f590b2d8e2478623b gb|KJ926244| PRGD_OTU001a_otuREP_1b08e77b9e57e00f590b2d8e2478623b, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_otuREP_1b08e77b9e57e00f590b2d8e2478623b, putative proteorhodopsin gene, partial cds. KJ926244 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTAATCACTGTACCATTACTGATGATAGAATTTTACCTAATTCTAGCAGCTGTAGGAAAAGCAAATTCTGGAATATTCTGGAGATTGTTAATTGGAACAGTTGTGATGCTTGTAGGTGGATACTTAGGAGAAGCAGGATACATTAACGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGAAAAGCTGCAGCAAAAAGTGGAAACAAAGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTT LITVPLLMIEFYLILAAVGKANSGIFWRLLIGTVVMLVGGYLGEAGYINATLGFVIGMAGWFYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCATTACTGATGATAGAATTTTACCTAATTCTAGCAGCT---------GTA---GGAAAAGCAAATTCT---GGAATA------------------------------------TTCTGGAGA---TTGTTAATTGGAACAGTTGTGATGCTTGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGAAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILAA---V-GKANS-GI------------FWR-LLIGTVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926261 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_71d982351e221b00d6b3c962ed44ca40 gb|KJ926261| PRGD_OTU001a_71d982351e221b00d6b3c962ed44ca40, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_71d982351e221b00d6b3c962ed44ca40, putative proteorhodopsin gene, partial cds. KJ926261 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781) TTAATCACTGTACCATTACTGATGATAGAATTTTATTTAATTCTAAAAGCTGTAGGTAAAGCAAATTCTGGAATATTCTGGAGATTGTTAATTGGAACAGTTGTGATGCTTGTTGGTGGATACTTAGGAGAAGCAGGATACATTAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGAAAAGCTGCAGCAAAAAGCGGAAACAAAGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTT LITVPLLMIEFYLILKAVGKANSGIFWRLLIGTVVMLVGGYLGEAGYINATLGFVIGMAGWFYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCATTACTGATGATAGAATTTTATTTAATTCTAAAAGCT---------GTA---GGTAAAGCAAATTCT---GGAATA------------------------------------TTCTGGAGA---TTGTTAATTGGAACAGTTGTGATGCTTGTTGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGAAAAGCTGCAGCAAAA------AGC---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILKA---V-GKANS-GI------------FWR-LLIGTVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926275 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_a76280454f54b658cb02f0b623b07dd3 gb|KJ926275| PRGD_OTU001a_a76280454f54b658cb02f0b623b07dd3, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_a76280454f54b658cb02f0b623b07dd3, putative proteorhodopsin gene, partial cds. KJ926275 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781) TTAATCACTGTACCATTACTGATGATAGAATTTTACCTAATTCTAGCAGCTGTAGGAAAAGCAAATTCTGGAATATTCTGGAGATTGTTAATTGGTACTGTAGTAATGCTACTTGGTGGATACTTAGGAGAAGCAGGATACATTAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAAGCTGCAGCAAAAAGTGGAAACAAAGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTT LITVPLLMIEFYLILAAVGKANSGIFWRLLIGTVVMLLGGYLGEAGYINATLGFVIGMAGWFYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCATTACTGATGATAGAATTTTACCTAATTCTAGCAGCT---------GTA---GGAAAAGCAAATTCT---GGAATA------------------------------------TTCTGGAGA---TTGTTAATTGGTACTGTAGTAATGCTACTTGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILAA---V-GKANS-GI------------FWR-LLIGTVVMLLGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926267 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_81eade71a24f9c1d9509a1c716f4295b gb|KJ926267| PRGD_OTU001a_81eade71a24f9c1d9509a1c716f4295b, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_81eade71a24f9c1d9509a1c716f4295b, putative proteorhodopsin gene, partial cds. KJ926267 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683) TTAATCACTGTACCATTACAAATGATAGAATTTTATTTAATTCTAGCTGCTGTAGGAAAAGCAAATGCTGGAATATTCTGGAGATTGTTAATTGGTACTGTAGTAATGCTACTTGGTGGATATTTAGGAGAAGCAGGATACATTAACGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGGCTGCAGCAAAAAGTGGTAACAAAGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATTATTACAGTA LITVPLQMIEFYLILAAVGKANAGIFWRLLIGTVVMLLGGYLGEAGYINATLGFVIGMAGWFYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIITV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCATTACAAATGATAGAATTTTATTTAATTCTAGCTGCT---------GTA---GGAAAAGCAAATGCT---GGAATA------------------------------------TTCTGGAGA---TTGTTAATTGGTACTGTAGTAATGCTACTTGGTGGATATTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGGCTGCAGCAAAA------AGT---GGTAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATTATTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-GKANA-GI------------FWR-LLIGTVVMLLGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIITV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926292 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_ec57ebf9514102130ca87caa66b519e1 gb|KJ926292| PRGD_OTU001a_ec57ebf9514102130ca87caa66b519e1, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_ec57ebf9514102130ca87caa66b519e1, putative proteorhodopsin gene, partial cds. KJ926292 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781), English Channel (48.7717, -3.9683) TTAATCACTGTACCATTACAAATGATAGAATTTTATTTAATTCTAGCTGCTGTAGGAAAAGCAAATGCTGGAATATTCTGGAGATTGTTAATTGGAACAGTTGTGATGCTACTTGGTGGATATTTAGGAGAAGCAGGATACATTAACGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGGCTGCAGCAAAAAGTGGTAACAAAGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATTATTACAGTA LITVPLQMIEFYLILAAVGKANAGIFWRLLIGTVVMLLGGYLGEAGYINATLGFVIGMAGWFYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIITV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCATTACAAATGATAGAATTTTATTTAATTCTAGCTGCT---------GTA---GGAAAAGCAAATGCT---GGAATA------------------------------------TTCTGGAGA---TTGTTAATTGGAACAGTTGTGATGCTACTTGGTGGATATTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGGCTGCAGCAAAA------AGT---GGTAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATTATTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-GKANA-GI------------FWR-LLIGTVVMLLGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIITV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926285 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_d1530bcabc9567a24e6232ecff293342 gb|KJ926285| PRGD_OTU001a_d1530bcabc9567a24e6232ecff293342, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_d1530bcabc9567a24e6232ecff293342, putative proteorhodopsin gene, partial cds. KJ926285 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781) TTAATCACTGTACCACTTCAAATGATAGAATTTTATTTAATTCTAGCTGCTGTAGGTAAAGCAAATTCTGGAATGTTCTGGAGATTATTGCTTGGTACTGTTGTAATGCTTGTCGGTGGATATTTGGGAGAAGCAGAATACATTAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAATATTCTCAGGTGAAGCAGGAAAAGCTGCAGCAAAAAGTGGAAACAAAGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTA LITVPLQMIEFYLILAAVGKANSGMFWRLLLGTVVMLVGGYLGEAEYINATLGFVIGMAGWFYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCACTTCAAATGATAGAATTTTATTTAATTCTAGCTGCT---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTATTGCTTGGTACTGTTGTAATGCTTGTCGGTGGATATTTGGGAGAA---------GCA------------------GAA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCAGGAAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-GKANS-GM------------FWR-LLLGTVVMLVGGYLGE---A------E--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926256 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_4deaea3195ef4c4186cf89cbc12ae40d gb|KJ926256| PRGD_OTU001a_4deaea3195ef4c4186cf89cbc12ae40d, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_4deaea3195ef4c4186cf89cbc12ae40d, putative proteorhodopsin gene, partial cds. KJ926256 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) TTAATCACTGTACCATTATTGATGTTAGAATTCTTTTTCATTCTAGCAGCTATTAATAAAGCCAATTCTGGAATTTTCTGGAGATTATTAATTGGTTCATTGGTAATGTTAATTGGTGGATATTTAGGAGAAGCAGGTTACATCAATTCTATGCTTGGTTTCATAATCGGTATGGCTGGATGGATCTACATTCTTTATGAAATATTTTCAGGTGAAGCAGGAAAACGTGCAGCAAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTT LITVPLLMLEFFFILAAINKANSGIFWRLLIGSLVMLIGGYLGEAGYINSMLGFIIGMAGWIYILYEIFSGEAGKRAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCATTATTGATGTTAGAATTCTTTTTCATTCTAGCAGCT---------ATT---AATAAAGCCAATTCT---GGAATT------------------------------------TTCTGGAGA---TTATTAATTGGTTCATTGGTAATGTTAATTGGTGGATATTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATTCT------------------ATGCTTGGT---TTCATAATCGGTATGGCTGGATGGATCTACATTCTTTATGAAATA---------------TTT------TCA---GGTGAAGCAGGAAAACGTGCAGCAAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFFFILAA---I-NKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NS------MLG-FIIGMAGWIYILYEI-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926254 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_3e461ff5cd6e40151d91ebbdf140c3a0 gb|KJ926254| PRGD_OTU001a_3e461ff5cd6e40151d91ebbdf140c3a0, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_3e461ff5cd6e40151d91ebbdf140c3a0, putative proteorhodopsin gene, partial cds. KJ926254 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) TTAATTACTGTTCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTGTAGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATTGGAGGATATTTAGGAGAAGCAGGTTACATCAATTCTATGCTTGGTTTTATTATTGGTATGGCTGGATGGATCTATATTCTTTATGAAATATTTTCAGGAGAAGCAGGTAAAGCTGCAGCTAAAAGTGGAAGCAAGGGTCTTGTAACTGCATTTGGTGCAATGAGAATGATCGTTACAGTT LITVPLQMVEFYLILAAVGKANSGMFWRLLIGSLVMLIGGYLGEAGYINSMLGFIIGMAGWIYILYEIFSGEAGKAAAKSGSKGLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTTCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATTGGAGGATATTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATTCT------------------ATGCTTGGT---TTTATTATTGGTATGGCTGGATGGATCTATATTCTTTATGAAATA---------------TTT------TCA---GGAGAAGCAGGTAAAGCTGCAGCTAAA------AGT---GGAAGCAAGGGTCTT---GTA---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NS------MLG-FIIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GSKGL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926270 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_92f5eceb363a80abda01fea7e01ba080 gb|KJ926270| PRGD_OTU001a_92f5eceb363a80abda01fea7e01ba080, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_92f5eceb363a80abda01fea7e01ba080, putative proteorhodopsin gene, partial cds. KJ926270 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-33.28, 45.35) TTAATTACAGTTCCATTACAGATGATAGAATTTTACTTAATTCTTTCAGCTGTAGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGGTAATTGGTTCAGTAGTGATGCTAGTTGGAGGATATCTAGGAGAAGCTGGATACATCAATGAAATGCTTGGTTTTATAATCGGTATGGCTGGATGGATCTATATTCTTTATGAAATATTTTCAGGAGAAGCAGGTAAAGCTGCATCTAAAAGTGGAAACAAAGCTCTTGTGACTGCGTTTGGTGCTATGAGAATGATCGTTACAGTT LITVPLQMIEFYLILSAVGKANSGMFWRLVIGSVVMLVGGYLGEAGYINEMLGFIIGMAGWIYILYEIFSGEAGKAASKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTACAGATGATAGAATTTTACTTAATTCTTTCAGCT---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGGTAATTGGTTCAGTAGTGATGCTAGTTGGAGGATATCTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGAA------------------ATGCTTGGT---TTTATAATCGGTATGGCTGGATGGATCTATATTCTTTATGAAATA---------------TTT------TCA---GGAGAAGCAGGTAAAGCTGCATCTAAA------AGT---GGAAACAAAGCTCTT---GTG---ACT---GCG---TTT---GGT---GCTATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILSA---V-GKANS-GM------------FWR-LVIGSVVMLVGGYLGE---A------G--Y-----------I----------------------NE------MLG-FIIGMAGWIYILYEI-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926273 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_a48c1d813808fa82b39ba46d95bcba25 gb|KJ926273| PRGD_OTU001a_a48c1d813808fa82b39ba46d95bcba25, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_a48c1d813808fa82b39ba46d95bcba25, putative proteorhodopsin gene, partial cds. KJ926273 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATAACAGTTCCACTACAAATGGTAGAATTTTATTTAATTCTAGCTGCTGTAGGTAAAGCAAATTCAGGAATGTTCTGGAGATTGTTAATTGGTTCAGTTGTAATGCTAGTTGGAGGATACTTAGGAGAAGCAGGATACATCAATGAAATGCTTGGTTTTATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAGTATTTTCAGGTGAAGCAGGAAAAGCAGCAGCAAAGAGTGGAAACAAAGCTCTTGTAACTGCATTTGGTGCTATGAGAATGATCGTAACAGTA LITVPLQMVEFYLILAAVGKANSGMFWRLLIGSVVMLVGGYLGEAGYINEMLGFIIGMAGWIYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTTCCACTACAAATGGTAGAATTTTATTTAATTCTAGCTGCT---------GTA---GGTAAAGCAAATTCA---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCAGTTGTAATGCTAGTTGGAGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGAA------------------ATGCTTGGT---TTTATAATCGGTATGGCTGGATGGATTTACATTCTTTATGAAGTA---------------TTT------TCA---GGTGAAGCAGGAAAAGCAGCAGCAAAG------AGT---GGAAACAAAGCTCTT---GTA---ACT---GCA---TTT---GGT---GCTATG---AGAATGATCGTAACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GKANS-GM------------FWR-LLIGSVVMLVGGYLGE---A------G--Y-----------I----------------------NE------MLG-FIIGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926245 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_0400ca2efd08ebc9539a31a40e84e78d gb|KJ926245| PRGD_OTU001a_0400ca2efd08ebc9539a31a40e84e78d, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_0400ca2efd08ebc9539a31a40e84e78d, putative proteorhodopsin gene, partial cds. KJ926245 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) TTAATCACTGTACCATTACAGATGGTTGAATTTTATTTAATTCTATCAGCTGTAGGTAAAGCAAACTCAGGAATGTTCTGGAGATTGCTACTTGGTTCAATCGTGATGCTAGTAGGTGGATATTTAGGAGAAGCAGGATACATTAATGCTACTCTTGGATTTATCGTAGGTATGGCAGGTTGGATATACATTCTTTATGAAATATTTTCTGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGTAACAAGTCTCTTGTAACTGCTTTTGGTGCTATGAGAATGATCGTTACAGTT LITVPLQMVEFYLILSAVGKANSGMFWRLLLGSIVMLVGGYLGEAGYINATLGFIVGMAGWIYILYEIFSGEAGKAAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCATTACAGATGGTTGAATTTTATTTAATTCTATCAGCT---------GTA---GGTAAAGCAAACTCA---GGAATG------------------------------------TTCTGGAGA---TTGCTACTTGGTTCAATCGTGATGCTAGTAGGTGGATATTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACTCTTGGA---TTTATCGTAGGTATGGCAGGTTGGATATACATTCTTTATGAAATA---------------TTT------TCT---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGTAACAAGTCTCTT---GTA---ACT---GCT---TTT---GGT---GCTATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSIVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926277 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_a9a67c0949e31ba89da9967601b9b7e4 gb|KJ926277| PRGD_OTU001a_a9a67c0949e31ba89da9967601b9b7e4, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_a9a67c0949e31ba89da9967601b9b7e4, putative proteorhodopsin gene, partial cds. KJ926277 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Indian Ocean (-23.5956, 69.0419) TTAATCACTGTACCATTACAGATGGTTGAATTTTATTTAATTCTATCAGCTGTAGGTAAAGCAAATTCAGGAATGTTCTGGAGATTGCTACTTGGTTCAATCGTGATGCTAGTCGGTGGATATTTAGGAGAAGCAGGATATATTAATGCTACTCTTGGATTTATCGTAGGTATGGCAGGTTGGATATACATTCTTTATGAAATATTTTCTGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGTAACAAGTCTCTTGTGACTGCTTTTGGTGCTATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILSAVGKANSGMFWRLLLGSIVMLVGGYLGEAGYINATLGFIVGMAGWIYILYEIFSGEAGKAAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCATTACAGATGGTTGAATTTTATTTAATTCTATCAGCT---------GTA---GGTAAAGCAAATTCA---GGAATG------------------------------------TTCTGGAGA---TTGCTACTTGGTTCAATCGTGATGCTAGTCGGTGGATATTTAGGAGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACTCTTGGA---TTTATCGTAGGTATGGCAGGTTGGATATACATTCTTTATGAAATA---------------TTT------TCT---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGTAACAAGTCTCTT---GTG---ACT---GCT---TTT---GGT---GCTATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSIVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926266 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_81e0bfd39120042d7872409b0d67c5c1 gb|KJ926266| PRGD_OTU001a_81e0bfd39120042d7872409b0d67c5c1, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_81e0bfd39120042d7872409b0d67c5c1, putative proteorhodopsin gene, partial cds. KJ926266 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTAATTACTGTACCACTACAAATGGTTGAATTTTATTTAATTCTATCAGCTGTAGGTAAAGCAAATTCAGGAATGTTCTGGAGATTGCTACTTGGTTCAGTTGTGATGCTTGTCGGTGGATATTTAGGAGAAGCAGGATACATTAATGCTACTCTTGGATTTATCATTGGTATGGCAGGTTGGATATACATTCTTTATGAAGTATTTTCTGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGTAACAAGTCTCTTGTAACTGCATTTGGTGCTATGAGAATGATCGTTACAGTT LITVPLQMVEFYLILSAVGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKAAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCACTACAAATGGTTGAATTTTATTTAATTCTATCAGCT---------GTA---GGTAAAGCAAATTCA---GGAATG------------------------------------TTCTGGAGA---TTGCTACTTGGTTCAGTTGTGATGCTTGTCGGTGGATATTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACTCTTGGA---TTTATCATTGGTATGGCAGGTTGGATATACATTCTTTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGTAACAAGTCTCTT---GTA---ACT---GCA---TTT---GGT---GCTATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926281 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_b6ee2d6af02d99ae9566b71f1f877c4c gb|KJ926281| PRGD_OTU001a_b6ee2d6af02d99ae9566b71f1f877c4c, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_b6ee2d6af02d99ae9566b71f1f877c4c, putative proteorhodopsin gene, partial cds. KJ926281 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637; -33.9602, -73.3769), Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683) TTAATCACTGTGCCACTACAAATGGTTGAATTTTATTTAATTCTTTCAGCTGTAGGAAAAGCAAACTCAGGAATGTTCTGGAGATTGCTACTTGGTTCAGTTGTGATGCTAGTAGGTGGATATTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCGTTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATATTTTCAGGCGAAGCTGGTAAAGCTGCAGCAAAAAGTGGTAACAAGGCTCTTGTAACTGCTTTTGGTGCTATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILSAVGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFVIGMAGWVYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCACTACAAATGGTTGAATTTTATTTAATTCTTTCAGCT---------GTA---GGAAAAGCAAACTCA---GGAATG------------------------------------TTCTGGAGA---TTGCTACTTGGTTCAGTTGTGATGCTAGTAGGTGGATATTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCGTTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATA---------------TTT------TCA---GGCGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGTAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCTATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926251 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_2b99ad17db1256fdce72e87b872cc2a6 gb|KJ926251| PRGD_OTU001a_2b99ad17db1256fdce72e87b872cc2a6, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_2b99ad17db1256fdce72e87b872cc2a6, putative proteorhodopsin gene, partial cds. KJ926251 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATAACTGTGCCACTACAAATGGTTGAATTTTATTTAATTCTATCAGCTGTAGGAAAAGCAAAATCAGGAATGTTCTGGAGATTGCTACTTGGTTCAGTTGTGATGCTAGTAGGTGGATATTTAGGAGAGGCTGGATACATCAATGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATATTTTCAGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGAAACAAAGCTCTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTT LITVPLQMVEFYLILSAVGKAKSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACTGTGCCACTACAAATGGTTGAATTTTATTTAATTCTATCAGCT---------GTA---GGAAAAGCAAAATCA---GGAATG------------------------------------TTCTGGAGA---TTGCTACTTGGTTCAGTTGTGATGCTAGTAGGTGGATATTTAGGAGAG---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATA---------------TTT------TCA---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILSA---V-GKAKS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926278 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_a9c3221a6a6962e1ebade22232c9f851 gb|KJ926278| PRGD_OTU001a_a9c3221a6a6962e1ebade22232c9f851, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_a9c3221a6a6962e1ebade22232c9f851, putative proteorhodopsin gene, partial cds. KJ926278 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATCACTGTGCCACTACAAATGGTTGAATTTTATTTAATTCTATCAGCTGTAGGAAAAGCAAAATCAGGAATGTTCTGGAGATTGCTACTTGGTTCAGTTGTGATGCTAGTAGGTGGATATTTAGGAGAGGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATATTTTCAGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGAAACAAAGCTCTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTT LITVPLQMVEFYLILSAVGKAKSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCACTACAAATGGTTGAATTTTATTTAATTCTATCAGCT---------GTA---GGAAAAGCAAAATCA---GGAATG------------------------------------TTCTGGAGA---TTGCTACTTGGTTCAGTTGTGATGCTAGTAGGTGGATATTTAGGAGAG---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATA---------------TTT------TCA---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILSA---V-GKAKS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926263 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_795119c5ca248a5d6780b0d451ebbf2b gb|KJ926263| PRGD_OTU001a_795119c5ca248a5d6780b0d451ebbf2b, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_795119c5ca248a5d6780b0d451ebbf2b, putative proteorhodopsin gene, partial cds. KJ926263 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATCACTGTACCACTACAAATGGTTGAATTTTATTTAATTCTATCAGCTGTAGGAAAAGCAAATTCAGGAATGTTTTGGAGATTGCTATTAGGTTCAGTTGTGATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGAAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILSAVGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCACTACAAATGGTTGAATTTTATTTAATTCTATCAGCT---------GTA---GGAAAAGCAAATTCA---GGAATG------------------------------------TTTTGGAGA---TTGCTATTAGGTTCAGTTGTGATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926282 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_bb189df645d12f0fde9a49668dde2994 gb|KJ926282| PRGD_OTU001a_bb189df645d12f0fde9a49668dde2994, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_bb189df645d12f0fde9a49668dde2994, putative proteorhodopsin gene, partial cds. KJ926282 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACTGTACCACTACAAATGGTTGAATTTTATTTAATTCTATCAGCTGTAGGAAAAGCAAATTCAGGAATGTTTTGGAGATTGTTACTTGGTTCAGTTGTAATGCTAGTCGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGAAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLQMVEFYLILSAVGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCACTACAAATGGTTGAATTTTATTTAATTCTATCAGCT---------GTA---GGAAAAGCAAATTCA---GGAATG------------------------------------TTTTGGAGA---TTGTTACTTGGTTCAGTTGTAATGCTAGTCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926249 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_29159f6fd89bfa6ceedbf41463ea35f4 gb|KJ926249| PRGD_OTU001a_29159f6fd89bfa6ceedbf41463ea35f4, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_29159f6fd89bfa6ceedbf41463ea35f4, putative proteorhodopsin gene, partial cds. KJ926249 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTGCCACTTCAAATGGTAGAATTCTATTTAATTCTAGCAGCAATAAGAAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAATAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATCAATGCTACACTTGGCTTTATTGTCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGAAAAGCTGCTGCTAAAAGTGGCAACAAATCTCTAGTAACTGCCTTCAGTGCTATGAGAATGATTGTTACAGTT LITVPLQMVEFYLILAAIRKANSGMFWRLLIGSLIMLIGGYLGEAGYINATLGFIVGMAGWVYILYEIFSGEAGKAAAKSGNKSLVTAFSAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCACTTCAAATGGTAGAATTCTATTTAATTCTAGCAGCA---------ATA---AGAAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAATAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTTGGC---TTTATTGTCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCTGCTAAA------AGT---GGCAACAAATCTCTA---GTA---ACT---GCC---TTC---AGT---GCTATG---AGAATGATTGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-RKANS-GM------------FWR-LLIGSLIMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKSL-V-T-A-F-S-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926250 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_2a27fab07d377156abe58f149a4be5ae gb|KJ926250| PRGD_OTU001a_2a27fab07d377156abe58f149a4be5ae, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_2a27fab07d377156abe58f149a4be5ae, putative proteorhodopsin gene, partial cds. KJ926250 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACTGTGCCATTACAGATGATAGAATTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATTTTCTGGAGATTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTATAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATATTTTCAGGTGAAGCTGGAAAAGCTGCTTCTAAAAGTGGAAACAAAGCTCTTGTTACCGCGTTTAGTGCAATGAGAATGATTGTTACAGTA LITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAASKSGNKALVTAFSAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCATTACAGATGATAGAATTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTATAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATA---------------TTT------TCA---GGTGAAGCTGGAAAAGCTGCTTCTAAA------AGT---GGAAACAAAGCTCTT---GTT---ACC---GCG---TTT---AGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-S-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926257 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_59f7b75a792d0db63cbd5771ae7adc40 gb|KJ926257| PRGD_OTU001a_59f7b75a792d0db63cbd5771ae7adc40, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_59f7b75a792d0db63cbd5771ae7adc40, putative proteorhodopsin gene, partial cds. KJ926257 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACTGTGCCACTACAGATGATAGAATTTTATTTAATTCTAGTAGCTGTAAGAAAAGCAAATTCTGGAATATTCTGGAGATTGCTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGAAAAGCTGCTTCTAAAAGTGGAAACAAAGCTCTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACAGTA LITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEIFSGEAGKAASKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCACTACAGATGATAGAATTTTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAATTCT---GGAATA------------------------------------TTCTGGAGA---TTGCTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCTTCTAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEI-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926269 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_8fd76e5631bbd033daa5887180cad1bb gb|KJ926269| PRGD_OTU001a_8fd76e5631bbd033daa5887180cad1bb, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_8fd76e5631bbd033daa5887180cad1bb, putative proteorhodopsin gene, partial cds. KJ926269 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 01-juil-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACTGTGCCATTACAGATGATAGAATTCTACTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATTTTCTGGAGATTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGAAAAGCTGCTTCTAAAAGTGGAAACAAAGCTCTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACAGTA LITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEIFSGEAGKAASKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCATTACAGATGATAGAATTCTACTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCTTCTAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEI-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926259 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_6a07d769cbf4ca4890aaff7635aefcdf gb|KJ926259| PRGD_OTU001a_6a07d769cbf4ca4890aaff7635aefcdf, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_6a07d769cbf4ca4890aaff7635aefcdf, putative proteorhodopsin gene, partial cds. KJ926259 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -33.9602, -73.3769), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTAATTACTGTGCCATTACAGATGATAGAGTTCTATTTGATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATTTTCTGGAGATTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTGGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAGATATTCTCAGGTGAAGCTGGAAAAGCTGCTTCTAAAAGTGGAAACAAGGCTCTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACAGTA LITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEIFSGEAGKAASKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTATTTGATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTGGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAGATA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCTTCTAAA------AGT---GGAAACAAGGCTCTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEI-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926289 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_e10a63adba59b03835b84d5f27eb701a gb|KJ926289| PRGD_OTU001a_e10a63adba59b03835b84d5f27eb701a, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_e10a63adba59b03835b84d5f27eb701a, putative proteorhodopsin gene, partial cds. KJ926289 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Mediterranean Sea (33.762, 29.175), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73) TTAATTACTGTGCCATTACAGATGATAGAGTTTTATTTGATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATTTTCTGGAGATTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATATTTGGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAGGCTGGAAAAGCTGCTTCAAAAAGTGGAAACAAAGCTCTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACAGTA LITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEIFSGEAGKAASKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTTTATTTGATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATATTTGGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAGGCTGGAAAAGCTGCTTCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEI-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926279 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_ad41cfdf4582694eb7d4be047f044af8 gb|KJ926279| PRGD_OTU001a_ad41cfdf4582694eb7d4be047f044af8, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_ad41cfdf4582694eb7d4be047f044af8, putative proteorhodopsin gene, partial cds. KJ926279 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACTGTGCCATTACAGATGATAGAATTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATTTTCTGGAGATTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCAGCTTCTAAGAGTGGAAACAAAGCTCTTGTAACTGCTTTTGGTGCTATGAGAATGATAGTAACTGTA LITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEIFSGEAGKAASKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCATTACAGATGATAGAATTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCAGCTTCTAAG------AGT---GGAAACAAAGCTCTT---GTA---ACT---GCT---TTT---GGT---GCTATG---AGAATGATAGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEI-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926280 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_b298f0c50e4bf37991c3287726b86f42 gb|KJ926280| PRGD_OTU001a_b298f0c50e4bf37991c3287726b86f42, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_b298f0c50e4bf37991c3287726b86f42, putative proteorhodopsin gene, partial cds. KJ926280 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACTGTGCCATTACAGATGATAGAGTTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATTTTCTGGAGATTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCTAATAAGAGTGGAAACAAAGCTCTTGTAACTGCATTTGGTGCGATGAGAATGATCGTAACAGTA LITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEIFSGEAGKAANKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTAATAAG------AGT---GGAAACAAAGCTCTT---GTA---ACT---GCA---TTT---GGT---GCGATG---AGAATGATCGTAACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEI-----F--S-GEAGKAANK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926274 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_a6f3afdd27dd4f39bce6975eaacb4951 gb|KJ926274| PRGD_OTU001a_a6f3afdd27dd4f39bce6975eaacb4951, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_a6f3afdd27dd4f39bce6975eaacb4951, putative proteorhodopsin gene, partial cds. KJ926274 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175) TTAATTACTGTGCCATTACAGATGATAGAATTTTACTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCAGGAATATTCTGGAGATTGTTGATTGGATCATTGGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCTAATAAGAGTGGAAACAAAGCTCTTGTAACTGCTTTTGGCGCAATGAGAATGATTGTAACAGTA LITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAANKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCATTACAGATGATAGAATTTTACTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCA---GGAATA------------------------------------TTCTGGAGA---TTGTTGATTGGATCATTGGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTAATAAG------AGT---GGAAACAAAGCTCTT---GTA---ACT---GCT---TTT---GGC---GCAATG---AGAATGATTGTAACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAANK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926287 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_d70445e73ec6eb6125564e3001c61877 gb|KJ926287| PRGD_OTU001a_d70445e73ec6eb6125564e3001c61877, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_d70445e73ec6eb6125564e3001c61877, putative proteorhodopsin gene, partial cds. KJ926287 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACTGTGCCACTACAGATGATAGAATTTTATTTAATTCTAGTAGCTGTAAGAAAAGCAAATTCTGGAATTTTCTGGAGATTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCTAATAAGAGTGGAAACAAAGCTCTTGTAACTGCCTTCGGTGCAATGAGAATGATTGTAACTGTA LITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAANKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCACTACAGATGATAGAATTTTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAATTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTAATAAG------AGT---GGAAACAAAGCTCTT---GTA---ACT---GCC---TTC---GGT---GCAATG---AGAATGATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAANK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926268 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_88c95627780d993dc425577ba341d7d3 gb|KJ926268| PRGD_OTU001a_88c95627780d993dc425577ba341d7d3, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_88c95627780d993dc425577ba341d7d3, putative proteorhodopsin gene, partial cds. KJ926268 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACTGTGCCATTACAGATGATAGAATTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATTTTCTGGAGATTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCTAACAAGAGTGGAAACAAAGCTCTTGTAACTGCATTCAGTGCAATGAGAATGATTGTAACTGTA LITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAANKSGNKALVTAFSAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCATTACAGATGATAGAATTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTAACAAG------AGT---GGAAACAAAGCTCTT---GTA---ACT---GCA---TTC---AGT---GCAATG---AGAATGATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAANK--S-GNKAL-V-T-A-F-S-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926253 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_3da5d6e551ab83a0e92c840455bf5c36 gb|KJ926253| PRGD_OTU001a_3da5d6e551ab83a0e92c840455bf5c36, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_3da5d6e551ab83a0e92c840455bf5c36, putative proteorhodopsin gene, partial cds. KJ926253 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACTGTGCCACTACAGATGATAGAATTTTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATTTTCTGGAGATTGTTAATTGGTTCATTAGTAATGTTAATTGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAGTAGGTATGGCAGGTTGGTTATACATTCTTTATGAAATATTCTCAGGAGAAGCTGGTAAAGCTGCTAGTAAGAGTGGAAACAAAGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACTGTA LITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFIVGMAGWLYILYEIFSGEAGKAASKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCACTACAGATGATAGAATTTTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGTTAATTGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAGTAGGTATGGCAGGTTGGTTATACATTCTTTATGAAATA---------------TTC------TCA---GGAGAAGCTGGTAAAGCTGCTAGTAAG------AGT---GGAAACAAAGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWLYILYEI-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926291 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_e5c361e01b214cec011e624ff1c52bbe gb|KJ926291| PRGD_OTU001a_e5c361e01b214cec011e624ff1c52bbe, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_e5c361e01b214cec011e624ff1c52bbe, putative proteorhodopsin gene, partial cds. KJ926291 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) TTAATTACTGTGCCATTACAGATGATAGAATTCTACTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATTTTCTGGAGATTGTTAATTGGTTCATTAGTAATGTTAATCGGAGGATATCTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCGTTATCGGTATGGCAGGTTGGGTATACATACTCTATGAAATATTCTCAGGTGAAGCTGGAAAAGCTGCTTCAAAAAGTGGAAACAAAGCTCTTGTTACCGCGTTTGGTGCAATGAGAATGATTGTTACAGTA LITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEIFSGEAGKAASKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCATTACAGATGATAGAATTCTACTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGTTAATCGGAGGATATCTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCGTTATCGGTATGGCAGGTTGGGTATACATACTCTATGAAATA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCTTCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACC---GCG---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEI-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/IMCC9063]_KJ926264 [IV-Alpha8-SAR11/IMCC9063] PRGD_OTU001a_7f359f74a611426f546823f554a3ef44 gb|KJ926264| PRGD_OTU001a_7f359f74a611426f546823f554a3ef44, putative proteorhodopsin gene, partial cds. PRGD_OTU001a_7f359f74a611426f546823f554a3ef44, putative proteorhodopsin gene, partial cds. KJ926264 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C.Pelagibacter IMCC9063-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C.Pelagibacter IMCC9063-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683) TTAATTACTGTGCCATTACAGATGATAGAATTCTATTTGATTCTAGTAGCTGTAAGAAAAGCAAGCTCTGGAATTTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTATTATAGGTATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCTTCAAAAAGTGGAAATAAAGCTCTTGTTACCGCGTTTGGTGCAATGAGAATGATTGTTACAGTA LITVPLQMIEFYLILVAVRKASSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAASKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCATTACAGATGATAGAATTCTATTTGATTCTAGTAGCT---------GTA---AGAAAAGCAAGCTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTATTATAGGTATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTTCAAAA------AGT---GGAAATAAAGCTCTT---GTT---ACC---GCG---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILVA---V-RKASS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-EB80_69G02]_KJ926294 [IV-Alpha8-EB80_69G02] PRGD_OTU001b_otuREP_da675718380f87b8ba3f7b34e6ca02e6 gb|KJ926294| PRGD_OTU001b_otuREP_da675718380f87b8ba3f7b34e6ca02e6, putative proteorhodopsin gene, partial cds. PRGD_OTU001b_otuREP_da675718380f87b8ba3f7b34e6ca02e6, putative proteorhodopsin gene, partial cds. KJ926294 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/EB80_69G02-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 EB80_69G02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGAGAAGCTGGAAAAGCTGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTA LITVPLQMIEFYLILAAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGCAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGAGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926425 [IV-Alpha8-18B2] PRGD_OTU001c_ec7a866e783a7d1f60dea2d2c4fa1b7b gb|KJ926425| PRGD_OTU001c_ec7a866e783a7d1f60dea2d2c4fa1b7b, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_ec7a866e783a7d1f60dea2d2c4fa1b7b, putative proteorhodopsin gene, partial cds. KJ926425 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Indian Ocean (-33.28, 45.35) TTAATTACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGCTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGCTTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTATTCTCAGGTGAGGCTGGAAAAGCTGCAGCAAAAAGTGGAAGCAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIVGMAGWIYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGCTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGC---TTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAGGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAGCAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926408 [IV-Alpha8-18B2] PRGD_OTU001c_cd475137623ae73bfd96d4570331a9e9 gb|KJ926408| PRGD_OTU001c_cd475137623ae73bfd96d4570331a9e9, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_cd475137623ae73bfd96d4570331a9e9, putative proteorhodopsin gene, partial cds. KJ926408 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937) TTAATTACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATTGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGCTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATATATCAACGCTACTCTTGGCTTTATAGTCGGAATGGCTGGTTGGATATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAGCAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIVGMAGWIYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGCTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGC---TTTATAGTCGGAATGGCTGGTTGGATATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAGCAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926412 [IV-Alpha8-18B2] PRGD_OTU001c_d4e3afd8272bf995e2eab46507dcf16a gb|KJ926412| PRGD_OTU001c_d4e3afd8272bf995e2eab46507dcf16a, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_d4e3afd8272bf995e2eab46507dcf16a, putative proteorhodopsin gene, partial cds. KJ926412 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACTGTACCATTACAGATGGTGGAATTTTATTTAATTCTAGCAGCTATTGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGCTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGCTTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAGCAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACTGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIVGMAGWIYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCATTACAGATGGTGGAATTTTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGCTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGC---TTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAGCAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926329 [IV-Alpha8-18B2] PRGD_OTU001c_39f4181f7f4037d54b15d40704dfab2e gb|KJ926329| PRGD_OTU001c_39f4181f7f4037d54b15d40704dfab2e, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_39f4181f7f4037d54b15d40704dfab2e, putative proteorhodopsin gene, partial cds. KJ926329 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (33.762, 29.175), Indian Ocean (-33.28, 45.35) TTAATTACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATCGGTAAAGCAAACTCTGGAATGTTTTGGAGATTGCTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGCTTTATTGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAGCAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIVGMAGWIYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAACTCT---GGAATG------------------------------------TTTTGGAGA---TTGCTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGC---TTTATTGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAGCAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926372 [IV-Alpha8-18B2] PRGD_OTU001c_7d4e1d7b7f8959791d91eb2fa4ad6601 gb|KJ926372| PRGD_OTU001c_7d4e1d7b7f8959791d91eb2fa4ad6601, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_7d4e1d7b7f8959791d91eb2fa4ad6601, putative proteorhodopsin gene, partial cds. KJ926372 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45; -33.28, 45.35) TTAATTACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCAATCGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGCTTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAGCAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIVGMAGWIYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCA---------ATC---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGC---TTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAGCAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926360 [IV-Alpha8-18B2] PRGD_OTU001c_6be4763ed0a44bd84e3c76865b34bf59 gb|KJ926360| PRGD_OTU001c_6be4763ed0a44bd84e3c76865b34bf59, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_6be4763ed0a44bd84e3c76865b34bf59, putative proteorhodopsin gene, partial cds. KJ926360 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATTACTGTTCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATCGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGCTTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAGCAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIVGMAGWIYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTTCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGC---TTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAGCAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926313 [IV-Alpha8-18B2] PRGD_OTU001c_1a911b812e85b8ae6aa59d65ad3ca4dc gb|KJ926313| PRGD_OTU001c_1a911b812e85b8ae6aa59d65ad3ca4dc, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_1a911b812e85b8ae6aa59d65ad3ca4dc, putative proteorhodopsin gene, partial cds. KJ926313 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) TTAATTACAGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATCGGTAAGGCAAATTCTGGAATGTTCTGGAGATTGCTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGATTTATAATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAGCAAAGCTCTTGTAACCGCTTTTGGTGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATC---GGTAAGGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGCTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGA---TTTATAATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAGCAAAGCTCTT---GTA---ACC---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926316 [IV-Alpha8-18B2] PRGD_OTU001c_1f8bc889172f313a4fb176b60cfc0daa gb|KJ926316| PRGD_OTU001c_1f8bc889172f313a4fb176b60cfc0daa, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_1f8bc889172f313a4fb176b60cfc0daa, putative proteorhodopsin gene, partial cds. KJ926316 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATCGGTAAGGCAAATTCTGGAATGTTCTGGAGATTGCTAATTGGATCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGATTTATAATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAGCAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATC---GGTAAGGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGCTAATTGGATCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGA---TTTATAATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAGCAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926393 [IV-Alpha8-18B2] PRGD_OTU001c_ba84fa2c8c6b06f32cb10d37235b5fae gb|KJ926393| PRGD_OTU001c_ba84fa2c8c6b06f32cb10d37235b5fae, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_ba84fa2c8c6b06f32cb10d37235b5fae, putative proteorhodopsin gene, partial cds. KJ926393 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -33.28, 45.35) TTAATTACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTTGCAGCTATCGGTAAGGCAAATTCTGGAATGTTCTGGAGATTGCTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAATGCTACTCTTGGATTTATAATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTGTTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAGCAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTTGCAGCT---------ATC---GGTAAGGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGCTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACTCTTGGA---TTTATAATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTG---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAGCAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926419 [IV-Alpha8-18B2] PRGD_OTU001c_dfb6b909e583919b4ee9190931f0e298 gb|KJ926419| PRGD_OTU001c_dfb6b909e583919b4ee9190931f0e298, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_dfb6b909e583919b4ee9190931f0e298, putative proteorhodopsin gene, partial cds. KJ926419 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) TTAATTACAGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATCGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGCTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGTTTTATAATCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAGCAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGCTAATTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGT---TTTATAATCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAGCAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926371 [IV-Alpha8-18B2] PRGD_OTU001c_7d1238dc0684eb1505a0d140c819d7d5 gb|KJ926371| PRGD_OTU001c_7d1238dc0684eb1505a0d140c819d7d5, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_7d1238dc0684eb1505a0d140c819d7d5, putative proteorhodopsin gene, partial cds. KJ926371 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) TTAATTACAGTGCCATTACAGATGGTTGAATTCTATTTAATTCTATCAGCTGTAGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGCTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGATTTATAATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCGAAAAGTGGTAACAAATCTCTTGTAACAGCATTTGGTGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILSAVGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTACAGATGGTTGAATTCTATTTAATTCTATCAGCT---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGCTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGA---TTTATAATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCGAAA------AGT---GGTAACAAATCTCTT---GTA---ACA---GCA---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926401 [IV-Alpha8-18B2] PRGD_OTU001c_c13c720b316d0950b43f263c704b2fe9 gb|KJ926401| PRGD_OTU001c_c13c720b316d0950b43f263c704b2fe9, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_c13c720b316d0950b43f263c704b2fe9, putative proteorhodopsin gene, partial cds. KJ926401 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACAGTGCCACTACAGATGATTGAATTTTATTTAATTCTATCAGCTATAGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGCTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGATTTATAATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCTAAAAGTGGTAACAAATCTCTTGTAACAGCATTTGGTGCAATGAGAATGATTGTTACAGTA LITVPLQMIEFYLILSAIGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCACTACAGATGATTGAATTTTATTTAATTCTATCAGCT---------ATA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGCTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGA---TTTATAATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCTAAA------AGT---GGTAACAAATCTCTT---GTA---ACA---GCA---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILSA---I-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926386 [IV-Alpha8-18B2] PRGD_OTU001c_a7a1cff0398e4fe4bc0e6a2c5895da2e gb|KJ926386| PRGD_OTU001c_a7a1cff0398e4fe4bc0e6a2c5895da2e, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_a7a1cff0398e4fe4bc0e6a2c5895da2e, putative proteorhodopsin gene, partial cds. KJ926386 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCTGCTATCGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGATTTATAATCGGAATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAGCAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCTGCT---------ATC---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGA---TTTATAATCGGAATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAGCAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926374 [IV-Alpha8-18B2] PRGD_OTU001c_837f5f61bc1cbdf90a76fe83df93c59f gb|KJ926374| PRGD_OTU001c_837f5f61bc1cbdf90a76fe83df93c59f, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_837f5f61bc1cbdf90a76fe83df93c59f, putative proteorhodopsin gene, partial cds. KJ926374 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) TTAATTACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATTGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGATTTATAATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAGCAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGA---TTTATAATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAGCAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926322 [IV-Alpha8-18B2] PRGD_OTU001c_2496607f16b95270980768d961518baf gb|KJ926322| PRGD_OTU001c_2496607f16b95270980768d961518baf, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_2496607f16b95270980768d961518baf, putative proteorhodopsin gene, partial cds. KJ926322 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCCATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGATTTATAATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAGCAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACTGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCC---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGA---TTTATAATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAGCAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926434 [IV-Alpha8-18B2] PRGD_OTU001c_f7e0ff94219e8ba46588b6bd4d2058e3 gb|KJ926434| PRGD_OTU001c_f7e0ff94219e8ba46588b6bd4d2058e3, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_f7e0ff94219e8ba46588b6bd4d2058e3, putative proteorhodopsin gene, partial cds. KJ926434 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508) TTAATTACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCAATCGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTACTTGGTTCATTAGTAATGTTGATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGCTTTATAGTCGGAATGGCTGGTTGGATATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAGCAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIVGMAGWIYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCA---------ATC---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCATTAGTAATGTTGATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGC---TTTATAGTCGGAATGGCTGGTTGGATATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAGCAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926387 [IV-Alpha8-18B2] PRGD_OTU001c_a875a2ef6646f94338a57eb25e6389e9 gb|KJ926387| PRGD_OTU001c_a875a2ef6646f94338a57eb25e6389e9, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_a875a2ef6646f94338a57eb25e6389e9, putative proteorhodopsin gene, partial cds. KJ926387 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (33.762, 29.175), Indian Ocean (-14.48, 113.45) TTAATTACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATCGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGCTTTATTGTCGGAATGGCTGGTTGGATATACATTCTTTATGAAGTGTTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAGCAAAGCGCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIVGMAGWIYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGC---TTTATTGTCGGAATGGCTGGTTGGATATACATTCTTTATGAAGTG---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAGCAAAGCGCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926301 [IV-Alpha8-18B2] PRGD_OTU001c_0b20afd0923434833adde4f3ccfd386f gb|KJ926301| PRGD_OTU001c_0b20afd0923434833adde4f3ccfd386f, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_0b20afd0923434833adde4f3ccfd386f, putative proteorhodopsin gene, partial cds. KJ926301 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Arctic Ocean-Pacific side (69.5142, -133.4185) TTAATTACAGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATCGGTAAGGCAAATTCTGGAATGTTCTGGAGATTGCTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGCTTTATAGTCGGAATGGCAGGTTGGATATACATCCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAGCAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACTGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIVGMAGWIYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATC---GGTAAGGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGCTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGC---TTTATAGTCGGAATGGCAGGTTGGATATACATCCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAGCAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926420 [IV-Alpha8-18B2] PRGD_OTU001c_e343583c489a4bda0db9387b91a1c144 gb|KJ926420| PRGD_OTU001c_e343583c489a4bda0db9387b91a1c144, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_e343583c489a4bda0db9387b91a1c144, putative proteorhodopsin gene, partial cds. KJ926420 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45; -33.28, 45.35) TTAATTACAGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATCGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGCTACTTGGTTCATTGGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGCTTTATAGTTGGGATGGCAGGTTGGATATACATCCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAGCAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIVGMAGWIYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGCTACTTGGTTCATTGGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGC---TTTATAGTTGGGATGGCAGGTTGGATATACATCCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAGCAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926328 [IV-Alpha8-18B2] PRGD_OTU001c_34dac61caa5e83c6adf0329873a1d3bd gb|KJ926328| PRGD_OTU001c_34dac61caa5e83c6adf0329873a1d3bd, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_34dac61caa5e83c6adf0329873a1d3bd, putative proteorhodopsin gene, partial cds. KJ926328 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) TTAATTACAGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATCGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGCTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGCTTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAGCAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIVGMAGWIYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGCTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGC---TTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAGCAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926418 [IV-Alpha8-18B2] PRGD_OTU001c_de781268633d2bb5769d6a3f7be201ab gb|KJ926418| PRGD_OTU001c_de781268633d2bb5769d6a3f7be201ab, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_de781268633d2bb5769d6a3f7be201ab, putative proteorhodopsin gene, partial cds. KJ926418 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -33.28, 45.35) TTAATTACAGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCAATCGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTACTTGGTTCACTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGCTTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAGCAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIVGMAGWIYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCA---------ATC---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCACTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGC---TTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAGCAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926377 [IV-Alpha8-18B2] PRGD_OTU001c_8def6bc4ceb90f157ac5b9916e60affe gb|KJ926377| PRGD_OTU001c_8def6bc4ceb90f157ac5b9916e60affe, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_8def6bc4ceb90f157ac5b9916e60affe, putative proteorhodopsin gene, partial cds. KJ926377 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) TTAATTACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATCGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGCTAATTGGATCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGCTTTATTGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAGCAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIVGMAGWIYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGCTAATTGGATCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGC---TTTATTGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAGCAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926390 [IV-Alpha8-18B2] PRGD_OTU001c_a9b7e71825a1e84dd40e89b39d861eff gb|KJ926390| PRGD_OTU001c_a9b7e71825a1e84dd40e89b39d861eff, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_a9b7e71825a1e84dd40e89b39d861eff, putative proteorhodopsin gene, partial cds. KJ926390 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATTGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATATATCAATGCTACTCTTGGCTTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCGAAAAGTGGAAGCAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIVGMAGWIYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACTCTTGGC---TTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCGAAA------AGT---GGAAGCAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926428 [IV-Alpha8-18B2] PRGD_OTU001c_f19ea8fb0781d96cc9f4fe0d652c1d5b gb|KJ926428| PRGD_OTU001c_f19ea8fb0781d96cc9f4fe0d652c1d5b, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_f19ea8fb0781d96cc9f4fe0d652c1d5b, putative proteorhodopsin gene, partial cds. KJ926428 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGCTTTATAGTCGGTATGGCAGGTTGGATATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAGCAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIVGMAGWIYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGC---TTTATAGTCGGTATGGCAGGTTGGATATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAGCAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926311 [IV-Alpha8-18B2] PRGD_OTU001c_1775457fb09b2c2801a99aa5199dd24c gb|KJ926311| PRGD_OTU001c_1775457fb09b2c2801a99aa5199dd24c, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_1775457fb09b2c2801a99aa5199dd24c, putative proteorhodopsin gene, partial cds. KJ926311 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45; -33.28, 45.35) TTAATCACAGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATTGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGCTTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIVGMAGWIYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGC---TTTATAGTCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926325 [IV-Alpha8-18B2] PRGD_OTU001c_3176acc250eb5d95913ac1fc9037b383 gb|KJ926325| PRGD_OTU001c_3176acc250eb5d95913ac1fc9037b383, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_3176acc250eb5d95913ac1fc9037b383, putative proteorhodopsin gene, partial cds. KJ926325 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) TTAATTACTGTGCCACTACAAATGATAGAATTTTACTTAATTCTAGCAGCTATTGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGCTTTATAGTCGGAATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAACAAGTCTCTTGTAACCGCTTTTGGTGCAATGAGAATGATAGTTACAGTA LITVPLQMIEFYLILAAIGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIVGMAGWVYILYEVFSGEAGKAAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCACTACAAATGATAGAATTTTACTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGC---TTTATAGTCGGAATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAACAAGTCTCTT---GTA---ACC---GCT---TTT---GGT---GCAATG---AGAATGATAGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---I-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926336 [IV-Alpha8-18B2] PRGD_OTU001c_4243a944c468665ed15b8dffd0d90a71 gb|KJ926336| PRGD_OTU001c_4243a944c468665ed15b8dffd0d90a71, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_4243a944c468665ed15b8dffd0d90a71, putative proteorhodopsin gene, partial cds. KJ926336 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACTGTGCCATTACAGATGATAGAATTTTACTTAATTCTAGCAGCTATTGGTAAAGCAAATTCTGGAATGTTCTGGAGATTATTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGCTTTATAGTCGGAATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAACAAGTCACTTGTAACTGCTTTTGGTGCAATGAGAATGATAGTTACAGTA LITVPLQMIEFYLILAAIGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIVGMAGWVYILYEVFSGEAGKAAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCATTACAGATGATAGAATTTTACTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTATTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGC---TTTATAGTCGGAATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAACAAGTCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATAGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---I-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926432 [IV-Alpha8-18B2] PRGD_OTU001c_f5fd00036d281cb25799be4af4d97fa6 gb|KJ926432| PRGD_OTU001c_f5fd00036d281cb25799be4af4d97fa6, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_f5fd00036d281cb25799be4af4d97fa6, putative proteorhodopsin gene, partial cds. KJ926432 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACTGTGCCATTACAGATGATAGAATTTTACTTAATTCTAGCAGCTATTGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTCTTGGCTTTATAGTCGGAATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAACAAGTCTCTTGTAACTGCTTTTGGTGCGATGAGAATGATTGTTACAGTA LITVPLQMIEFYLILAAIGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIVGMAGWVYILYEVFSGEAGKAAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCATTACAGATGATAGAATTTTACTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTCTTGGC---TTTATAGTCGGAATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAACAAGTCTCTT---GTA---ACT---GCT---TTT---GGT---GCGATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---I-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926318 [IV-Alpha8-18B2] PRGD_OTU001c_2351d069dc2645d06f09733aa89608b6 gb|KJ926318| PRGD_OTU001c_2351d069dc2645d06f09733aa89608b6, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_2351d069dc2645d06f09733aa89608b6, putative proteorhodopsin gene, partial cds. KJ926318 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) TTAATCACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATTGGTAAAGCGAACTCTGGAATGTTCTGGAGATTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCTGGATACATCAACGCTACTTTAGGCTTTATAGTCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGAAGCAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIVGMAGWVYILYEVFSGEAGKAAAKSGSKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCGAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTTTAGGC---TTTATAGTCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGAAGCAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GSKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926332 [IV-Alpha8-18B2] PRGD_OTU001c_3c6ce189c2f8b8bf7b49041e53e42101 gb|KJ926332| PRGD_OTU001c_3c6ce189c2f8b8bf7b49041e53e42101, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_3c6ce189c2f8b8bf7b49041e53e42101, putative proteorhodopsin gene, partial cds. KJ926332 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATTAATGCAACACTTGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCATCGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCA------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCATCGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926410 [IV-Alpha8-18B2] PRGD_OTU001c_d28e0259a93806c76cf8e17749b2d566 gb|KJ926410| PRGD_OTU001c_d28e0259a93806c76cf8e17749b2d566, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_d28e0259a93806c76cf8e17749b2d566, putative proteorhodopsin gene, partial cds. KJ926410 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGTTATATTAATGCTACACTTGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCATCGAAGAGTGGTAATAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCATCGAAG------AGT---GGTAATAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926402 [IV-Alpha8-18B2] PRGD_OTU001c_c1b37af990fbe94b98b03257635846f8 gb|KJ926402| PRGD_OTU001c_c1b37af990fbe94b98b03257635846f8, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_c1b37af990fbe94b98b03257635846f8, putative proteorhodopsin gene, partial cds. KJ926402 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGCAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATTAATGCTACACTTGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCATCGAAGAGTGGTAACAAAGCTCTTGTAACTGCGTTCGGAGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGCAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCATCGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCG---TTC---GGA---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926335 [IV-Alpha8-18B2] PRGD_OTU001c_4124b24e3c862617972457f4413f3420 gb|KJ926335| PRGD_OTU001c_4124b24e3c862617972457f4413f3420, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_4124b24e3c862617972457f4413f3420, putative proteorhodopsin gene, partial cds. KJ926335 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCGGGATACATTAACGCTACACTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCGCAGAAGAGTGGTAACAAATCTCTTGTAACTGCATTTGGAGCAATGAGAATGATCGTTACTGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAQKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCG------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCGCAGAAG------AGT---GGTAACAAATCTCTT---GTA---ACT---GCA---TTT---GGA---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAQK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926295 [IV-Alpha8-18B2] PRGD_OTU001c_otuREP_b27effd782157e52792894c51803afc7 gb|KJ926295| PRGD_OTU001c_otuREP_b27effd782157e52792894c51803afc7, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_otuREP_b27effd782157e52792894c51803afc7, putative proteorhodopsin gene, partial cds. KJ926295 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATACATTAATGCTACACTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCACAGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAQKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCACAGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAQK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926350 [IV-Alpha8-18B2] PRGD_OTU001c_5aab47a125088e30d87676f281420d23 gb|KJ926350| PRGD_OTU001c_5aab47a125088e30d87676f281420d23, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_5aab47a125088e30d87676f281420d23, putative proteorhodopsin gene, partial cds. KJ926350 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTAATCACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATTAATAAAGCAAACTCTGGAATGTTCTGGAGATTATTAATTGGTTCATTAGTGATGCTTATCGGTGGATACTTAGGTGAAGCAGGTTACATTAATGCTACATTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCATCAAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATCGTTACTGTA LITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATT---AATAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTATTAATTGGTTCATTAGTGATGCTTATCGGTGGATACTTAGGTGAA---------GCA------------------GGT------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACATTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCATCAAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926389 [IV-Alpha8-18B2] PRGD_OTU001c_a92b5af48bedf3c1ac244049976ad095 gb|KJ926389| PRGD_OTU001c_a92b5af48bedf3c1ac244049976ad095, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_a92b5af48bedf3c1ac244049976ad095, putative proteorhodopsin gene, partial cds. KJ926389 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACTGTACCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTAATAAAGCAAACTCTGGAATGTTCTGGAGATTATTAATTGGTTCATTAGTGATGCTTATCGGTGGATACTTAGGTGAAGCAGGATATATAAATGCTACACTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCATCAAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATCGTTACTGTA LITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---AATAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTATTAATTGGTTCATTAGTGATGCTTATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATA------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCATCAAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926317 [IV-Alpha8-18B2] PRGD_OTU001c_2047d8fecfefada01e824e821304d4fe gb|KJ926317| PRGD_OTU001c_2047d8fecfefada01e824e821304d4fe, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_2047d8fecfefada01e824e821304d4fe, putative proteorhodopsin gene, partial cds. KJ926317 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) TTAATCACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATTAATAAAGCAAACTCTGGAATGTTCTGGAGATTATTAATTGGTTCATTAGTGATGCTTATCGGTGGATACTTAGGTGAAGCAGGATACATTAATGCTACACTAGGTTTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCATCGAAGAGTGGTAACAAAGCTCTTGTAACTGCGTTCGGAGCGATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATT---AATAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTATTAATTGGTTCATTAGTGATGCTTATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCATCGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCG---TTC---GGA---GCGATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926346 [IV-Alpha8-18B2] PRGD_OTU001c_525969dcf2636358ca41cde0de7ea9c5 gb|KJ926346| PRGD_OTU001c_525969dcf2636358ca41cde0de7ea9c5, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_525969dcf2636358ca41cde0de7ea9c5, putative proteorhodopsin gene, partial cds. KJ926346 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) TTAATCACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATTAATAAAGCAAACTCTGGAATGTTCTGGAGATTATTAATTGGTTCATTAGTGATGCTTATCGGTGGTTACTTAGGTGAAGCAGGATATATTAATGCTACACTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCATCGAAGAGTGGTAACAAAGCTCTTGTAACTGCGTTCGGAGCGATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATT---AATAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTATTAATTGGTTCATTAGTGATGCTTATCGGTGGTTACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCATCGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCG---TTC---GGA---GCGATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926324 [IV-Alpha8-18B2] PRGD_OTU001c_27300e5e8ba92fee3478f7d2ba085c35 gb|KJ926324| PRGD_OTU001c_27300e5e8ba92fee3478f7d2ba085c35, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_27300e5e8ba92fee3478f7d2ba085c35, putative proteorhodopsin gene, partial cds. KJ926324 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATTAACAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATACATTAATGCTACATTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCACAGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAQKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATT---AACAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACATTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCACAGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAQK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926383 [IV-Alpha8-18B2] PRGD_OTU001c_9d8a10877b9d53d65d08f646d7ec017e gb|KJ926383| PRGD_OTU001c_9d8a10877b9d53d65d08f646d7ec017e, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_9d8a10877b9d53d65d08f646d7ec017e, putative proteorhodopsin gene, partial cds. KJ926383 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175) TTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATCGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATCGGTTCACTAGTAATGCTTATCGGTGGATACTTAGGTGAAGCAGGATATATTAATGCTACACTAGGTTTCATTATCGGAATGGCAGGTTGGGTATATATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAGAGTGGTAACAAGGCTCTTGTAACTGCATTTGGAGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCACTAGTAATGCTTATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATTATCGGAATGGCAGGTTGGGTATATATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAG------AGT---GGTAACAAGGCTCTT---GTA---ACT---GCA---TTT---GGA---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926413 [IV-Alpha8-18B2] PRGD_OTU001c_d5003ea7accb0ed71f8eb3f3001ee718 gb|KJ926413| PRGD_OTU001c_d5003ea7accb0ed71f8eb3f3001ee718, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_d5003ea7accb0ed71f8eb3f3001ee718, putative proteorhodopsin gene, partial cds. KJ926413 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175; 33.935, 18.508), Indian Ocean (-14.48, 113.45) TTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATCGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTTATCGGTGGTTACTTAGGTGAAGCAGGATATATTAATGCTACACTAGGTTTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAGAGTGGTAACAAGGCTCTTGTAACTGCATTTGGAGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTTATCGGTGGTTACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAG------AGT---GGTAACAAGGCTCTT---GTA---ACT---GCA---TTT---GGA---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926359 [IV-Alpha8-18B2] PRGD_OTU001c_6ab47a3d21aa38edb919d0d04be8e1e3 gb|KJ926359| PRGD_OTU001c_6ab47a3d21aa38edb919d0d04be8e1e3, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_6ab47a3d21aa38edb919d0d04be8e1e3, putative proteorhodopsin gene, partial cds. KJ926359 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-14.48, 113.45) TTAATCACAGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGTTAATTGGTGGATACTTAGGTGAAGCTGGTTATATTAATGAAACACTTGGTTTCATAGTTGGAATGGCAGGTTGGATATACATTCTATATGAAATATTTTCAGGTGAAGCTGGTAAAGCTGCAGCTAAAAGTGGTAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINETLGFIVGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGTTAATTGGTGGATACTTAGGTGAA---------GCT------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------AATGAA------------------ACACTTGGT---TTCATAGTTGGAATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTT------TCA---GGTGAAGCTGGTAAAGCTGCAGCTAAA------AGT---GGTAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NE------TLG-FIVGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926323 [IV-Alpha8-18B2] PRGD_OTU001c_256e3c66103a7a288dc7ab176e615b65 gb|KJ926323| PRGD_OTU001c_256e3c66103a7a288dc7ab176e615b65, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_256e3c66103a7a288dc7ab176e615b65, putative proteorhodopsin gene, partial cds. KJ926323 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTGCCATTACAAATGGTAGAATTCTATTTAATTCTAGCAGCTATCGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCAGGATATATTAATGCTACACTTGGTTTCATCATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGTAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTACAAATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGTAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926331 [IV-Alpha8-18B2] PRGD_OTU001c_3aea4e8d8d56c123d3bc73c64bf53724 gb|KJ926331| PRGD_OTU001c_3aea4e8d8d56c123d3bc73c64bf53724, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_3aea4e8d8d56c123d3bc73c64bf53724, putative proteorhodopsin gene, partial cds. KJ926331 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937), Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATCGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCACTAGTAATGCTTATCGGTGGTTACTTAGGTGAAGCAGGATATATTAATGCTACACTTGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCACTAGTAATGCTTATCGGTGGTTACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926315 [IV-Alpha8-18B2] PRGD_OTU001c_1ebdf90ae177e3d5697a9dd038ee6dff gb|KJ926315| PRGD_OTU001c_1ebdf90ae177e3d5697a9dd038ee6dff, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_1ebdf90ae177e3d5697a9dd038ee6dff, putative proteorhodopsin gene, partial cds. KJ926315 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATCGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCACTAGTAATGCTTATCGGTGGTTACTTAGGTGAAGCAGGATATATTAATGCTACACTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCACAGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAQKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCACTAGTAATGCTTATCGGTGGTTACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCACAGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAQK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926299 [IV-Alpha8-18B2] PRGD_OTU001c_07216732083642ec9acaca57f2aab42e gb|KJ926299| PRGD_OTU001c_07216732083642ec9acaca57f2aab42e, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_07216732083642ec9acaca57f2aab42e, putative proteorhodopsin gene, partial cds. KJ926299 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATCAATGCTACACTTGGTTTCATCATTGGAATGGCAGGTTGGATATACATTCTTTATGAAGTATTTTCAGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGAAACAAAGCTCTTGTAACTGCTTTCGGTGCAATGAGAATGATCGTTACGGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATTGGAATGGCAGGTTGGATATACATTCTTTATGAAGTA---------------TTT------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGAAACAAAGCTCTT---GTA---ACT---GCT---TTC---GGT---GCAATG---AGAATGATCGTTACGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926405 [IV-Alpha8-18B2] PRGD_OTU001c_c454feeb12c7d29ec284bbfad93a5f65 gb|KJ926405| PRGD_OTU001c_c454feeb12c7d29ec284bbfad93a5f65, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_c454feeb12c7d29ec284bbfad93a5f65, putative proteorhodopsin gene, partial cds. KJ926405 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Arctic Ocean-Pacific side (72.0542, -130.8781), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATTAATGCTACACTTGGTTTCATCATCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTATTTTCAGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTA---------------TTT------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926404 [IV-Alpha8-18B2] PRGD_OTU001c_c3765492076410760cf2112e5c08640d gb|KJ926404| PRGD_OTU001c_c3765492076410760cf2112e5c08640d, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_c3765492076410760cf2112e5c08640d, putative proteorhodopsin gene, partial cds. KJ926404 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCGAACTCTGGAATGTTCTGGAGATTATTAATTGGTTCATTGGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATAAATTCTACACTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAATCTGGTAGAGCTGCGGCGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINSTLGFIIGMAGWVYILYEVFSGESGRAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCGAACTCT---GGAATG------------------------------------TTCTGGAGA---TTATTAATTGGTTCATTGGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATA------------------------------------------------------------------AATTCT------------------ACACTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAATCTGGTAGAGCTGCGGCGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NS------TLG-FIIGMAGWVYILYEV-----F--S-GESGRAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926309 [IV-Alpha8-18B2] PRGD_OTU001c_168b346a1ced2c51d2c060a93ed81a4b gb|KJ926309| PRGD_OTU001c_168b346a1ced2c51d2c060a93ed81a4b, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_168b346a1ced2c51d2c060a93ed81a4b, putative proteorhodopsin gene, partial cds. KJ926309 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-14.48, 113.45) TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATACATTAATGCTACATTAGGTTTCATCATTGGTATGGCAGGTTGGGTATACATTCTATATGAAGTATTCTCAGGTGAATCAGGTAAAGCTGCAGCAAAAAGTGGTAACAAAGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGESGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACATTAGGT---TTCATCATTGGTATGGCAGGTTGGGTATACATTCTATATGAAGTA---------------TTC------TCA---GGTGAATCAGGTAAAGCTGCAGCAAAA------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GESGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926397 [IV-Alpha8-18B2] PRGD_OTU001c_bcc510017e4f83d1fd03fdac1554234d gb|KJ926397| PRGD_OTU001c_bcc510017e4f83d1fd03fdac1554234d, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_bcc510017e4f83d1fd03fdac1554234d, putative proteorhodopsin gene, partial cds. KJ926397 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATTAATGCTACATTAGGTTTCATCATTGGTATGGCAGGTTGGGTATACATTCTATATGAAGTATTCTCAGGTGAATCAGGTAAAGCTGCAGCAAAAAGTGGTAACAAATCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGESGKAAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACATTAGGT---TTCATCATTGGTATGGCAGGTTGGGTATACATTCTATATGAAGTA---------------TTC------TCA---GGTGAATCAGGTAAAGCTGCAGCAAAA------AGT---GGTAACAAATCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GESGKAAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926365 [IV-Alpha8-18B2] PRGD_OTU001c_74e4d933a0edd68bfd4d80b07d3da7ff gb|KJ926365| PRGD_OTU001c_74e4d933a0edd68bfd4d80b07d3da7ff, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_74e4d933a0edd68bfd4d80b07d3da7ff, putative proteorhodopsin gene, partial cds. KJ926365 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTTATCGGTGGTTACTTAGGTGAAGCAGGATATATTAATGCTACACTAGGTTTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAGTCAGGAAGAGCTGCAGCGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGESGRAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTTATCGGTGGTTACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAGTCAGGAAGAGCTGCAGCGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GESGRAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926400 [IV-Alpha8-18B2] PRGD_OTU001c_c092df82a90cbb901d0ffac4e267a9ee gb|KJ926400| PRGD_OTU001c_c092df82a90cbb901d0ffac4e267a9ee, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_c092df82a90cbb901d0ffac4e267a9ee, putative proteorhodopsin gene, partial cds. KJ926400 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATACATTAATGCTACACTAGGTTTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAGTCTGGAAGAGCTGCAGCGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGESGRAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAGTCTGGAAGAGCTGCAGCGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GESGRAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926304 [IV-Alpha8-18B2] PRGD_OTU001c_10950ce22b59d73ce3b8434a8c5bcf23 gb|KJ926304| PRGD_OTU001c_10950ce22b59d73ce3b8434a8c5bcf23, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_10950ce22b59d73ce3b8434a8c5bcf23, putative proteorhodopsin gene, partial cds. KJ926304 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (72.0542, -130.8781), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) TTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGCTTATCGGTGGATACTTAGGTGAAGCAGGATATATTAATTCTACATTAGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAGTCAGGAAGAGCTGCAGCGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINSTLGFIIGMAGWVYILYEVFSGESGRAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGCTTATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATTCT------------------ACATTAGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAGTCAGGAAGAGCTGCAGCGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NS------TLG-FIIGMAGWVYILYEV-----F--S-GESGRAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926302 [IV-Alpha8-18B2] PRGD_OTU001c_0d16119506fb523a6a75b4cd2f9b3a0e gb|KJ926302| PRGD_OTU001c_0d16119506fb523a6a75b4cd2f9b3a0e, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_0d16119506fb523a6a75b4cd2f9b3a0e, putative proteorhodopsin gene, partial cds. KJ926302 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) TTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATCGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGCTTATCGGTGGTTACTTAGGTGAAGCAGGATATATTAATGCTACACTAGGTTTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAGTCTGGAAGAGCTGCAGCGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGESGRAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGCTTATCGGTGGTTACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAGTCTGGAAGAGCTGCAGCGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GESGRAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926344 [IV-Alpha8-18B2] PRGD_OTU001c_4c3a508f501e73607aa43028da98a915 gb|KJ926344| PRGD_OTU001c_4c3a508f501e73607aa43028da98a915, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_4c3a508f501e73607aa43028da98a915, putative proteorhodopsin gene, partial cds. KJ926344 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATCGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCACTAGTAATGCTTATCGGTGGTTACTTAGGTGAAGCAGGATATATTAATGCTACACTAGGTTTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAGTCTGGAAGAGCTGCAGCGAAAAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGESGRAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCACTAGTAATGCTTATCGGTGGTTACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAGTCTGGAAGAGCTGCAGCGAAA------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GESGRAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926334 [IV-Alpha8-18B2] PRGD_OTU001c_40dadd96b238d3d1b669cee7d7e37b97 gb|KJ926334| PRGD_OTU001c_40dadd96b238d3d1b669cee7d7e37b97, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_40dadd96b238d3d1b669cee7d7e37b97, putative proteorhodopsin gene, partial cds. KJ926334 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) TTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATCGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCACTAGTAATGCTTATCGGTGGTTACTTAGGTGAAGCAGGATATATTAATGCTACACTAGGTTTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAGTCAGGAAGAGCTGCAGCGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGESGRAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCACTAGTAATGCTTATCGGTGGTTACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAGTCAGGAAGAGCTGCAGCGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GESGRAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926303 [IV-Alpha8-18B2] PRGD_OTU001c_101338691400fa88e4082e53789563d9 gb|KJ926303| PRGD_OTU001c_101338691400fa88e4082e53789563d9, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_101338691400fa88e4082e53789563d9, putative proteorhodopsin gene, partial cds. KJ926303 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAATCACTGTGCCGCTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATCGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATCGGTTCACTAGTAATGCTTATCGGTGGTTACTTAGGTGAAGCAGGATATATTAATGCTACACTAGGTTTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAGCTGCAGCGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCGCTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCACTAGTAATGCTTATCGGTGGTTACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAGCTGCAGCGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926308 [IV-Alpha8-18B2] PRGD_OTU001c_149f7e56ea9593bbec5ad09ceff2973c gb|KJ926308| PRGD_OTU001c_149f7e56ea9593bbec5ad09ceff2973c, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_149f7e56ea9593bbec5ad09ceff2973c, putative proteorhodopsin gene, partial cds. KJ926308 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATCACTGTGCCTTTACAGATGGTAGAATTTTACTTAATTCTAGCAGCTATCGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGCTTATCGGAGGATACTTAGGTGAAGCAGGATATATTAATTCTACACTAGGTTTCATCATTGGAATGGCAGGTTGGATATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCAGCTAAAAGTGGTAACAAAGCTCTTGTAACAGCTTTTGGTGCTATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINSTLGFIIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCTTTACAGATGGTAGAATTTTACTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGCTTATCGGAGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATTCT------------------ACACTAGGT---TTCATCATTGGAATGGCAGGTTGGATATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCTAAA------AGT---GGTAACAAAGCTCTT---GTA---ACA---GCT---TTT---GGT---GCTATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NS------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926436 [IV-Alpha8-18B2] PRGD_OTU001c_f8d0cf423436f4fdac02f73bbdef7f35 gb|KJ926436| PRGD_OTU001c_f8d0cf423436f4fdac02f73bbdef7f35, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_f8d0cf423436f4fdac02f73bbdef7f35, putative proteorhodopsin gene, partial cds. KJ926436 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATCACTGTGCCTTTACAGATGGTGGAATTTTACTTAATTCTAGCAGCTATCGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGCTTATCGGAGGATACTTAGGTGAAGCAGGATATATTAATTCTACACTAGGTTTCATTATTGGAATGGCAGGTTGGATATATATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCAGCTAAAAGTGGTAACAAAGCTCTTGTAACAGCTTTTGGTGCTATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINSTLGFIIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCTTTACAGATGGTGGAATTTTACTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGCTTATCGGAGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATTCT------------------ACACTAGGT---TTCATTATTGGAATGGCAGGTTGGATATATATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCTAAA------AGT---GGTAACAAAGCTCTT---GTA---ACA---GCT---TTT---GGT---GCTATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NS------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926430 [IV-Alpha8-18B2] PRGD_OTU001c_f299bb2911507c46cb4f27a61edeefa2 gb|KJ926430| PRGD_OTU001c_f299bb2911507c46cb4f27a61edeefa2, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_f299bb2911507c46cb4f27a61edeefa2, putative proteorhodopsin gene, partial cds. KJ926430 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-23.5956, 69.0419) TTAATCACTGTGCCTTTACAGATGGTGGAATTTTACTTAATTCTAGCAGCTATCGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGCTTATCGGTGGATACTTAGGTGAAGCAGGATATATTAATGCTACACTAGGTTTCATTATTGGAATGGCAGGTTGGATATACATTCTATATGAAATATTCTCAGGTGAAGCAGGTAAAGCTGCAGCTAAAAGTGGCAACAAAGCTCTTGTAACAGCTTTTGGTGCTATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCTTTACAGATGGTGGAATTTTACTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGCTTATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATTATTGGAATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTC------TCA---GGTGAAGCAGGTAAAGCTGCAGCTAAA------AGT---GGCAACAAAGCTCTT---GTA---ACA---GCT---TTT---GGT---GCTATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926395 [IV-Alpha8-18B2] PRGD_OTU001c_bad2178547437839d685ceb410be4c29 gb|KJ926395| PRGD_OTU001c_bad2178547437839d685ceb410be4c29, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_bad2178547437839d685ceb410be4c29, putative proteorhodopsin gene, partial cds. KJ926395 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACAGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATTAATGCTACACTTGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCGAAAAGTGGAAACAAAGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCGAAA------AGT---GGAAACAAAGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926357 [IV-Alpha8-18B2] PRGD_OTU001c_64b9573c250b8a5ef5dddcdd9867ea73 gb|KJ926357| PRGD_OTU001c_64b9573c250b8a5ef5dddcdd9867ea73, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_64b9573c250b8a5ef5dddcdd9867ea73, putative proteorhodopsin gene, partial cds. KJ926357 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACAGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATCGGTAAAGCAAACTCAGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATAAATGCTACACTTGGTTTCATCATTGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCGAAAAGTGGTAACAAAGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAACTCA---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATA------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATTGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCGAAA------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926384 [IV-Alpha8-18B2] PRGD_OTU001c_9e9a8bcc1343d83a572f36d5acd30a01 gb|KJ926384| PRGD_OTU001c_9e9a8bcc1343d83a572f36d5acd30a01, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_9e9a8bcc1343d83a572f36d5acd30a01, putative proteorhodopsin gene, partial cds. KJ926384 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCGATCGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCACTGGTAATGCTTATCGGTGGTTACTTAGGTGAAGCAGGATATATTAATGCTACACTTGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAGGCTGGTAAAGCTGCAGCGAAAAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCG---------ATC---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCACTGGTAATGCTTATCGGTGGTTACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAGGCTGGTAAAGCTGCAGCGAAA------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926366 [IV-Alpha8-18B2] PRGD_OTU001c_79ad6172001b20ebc4aecebbcab6f052 gb|KJ926366| PRGD_OTU001c_79ad6172001b20ebc4aecebbcab6f052, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_79ad6172001b20ebc4aecebbcab6f052, putative proteorhodopsin gene, partial cds. KJ926366 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -33.28, 45.35) TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTAACAAAGCAAACTCTGGAATGTTCTGGAGACTGTTAATCGGTTCACTAGTTATGCTTATCGGTGGATACTTAGGTGAAGCAGGATATATTAATGCTACACTTGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAGAGTGGCAATAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---AACAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---CTGTTAATCGGTTCACTAGTTATGCTTATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAG------AGT---GGCAATAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926327 [IV-Alpha8-18B2] PRGD_OTU001c_32269e0355ea1f0b3765b450c574ecb4 gb|KJ926327| PRGD_OTU001c_32269e0355ea1f0b3765b450c574ecb4, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_32269e0355ea1f0b3765b450c574ecb4, putative proteorhodopsin gene, partial cds. KJ926327 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Pacific side (69.5142, -133.4185), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATCGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATTAATGCTACACTTGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAGAGCAGCGGCGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGRAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAGAGCAGCGGCGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGRAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926352 [IV-Alpha8-18B2] PRGD_OTU001c_5dd09764116279d0b98c987580b9c4b5 gb|KJ926352| PRGD_OTU001c_5dd09764116279d0b98c987580b9c4b5, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_5dd09764116279d0b98c987580b9c4b5, putative proteorhodopsin gene, partial cds. KJ926352 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATTAATGCTACACTTGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCAGCAGCCAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCAGCAGCCAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926310 [IV-Alpha8-18B2] PRGD_OTU001c_16fc83f8b5b3e20bad86d2fef9139364 gb|KJ926310| PRGD_OTU001c_16fc83f8b5b3e20bad86d2fef9139364, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_16fc83f8b5b3e20bad86d2fef9139364, putative proteorhodopsin gene, partial cds. KJ926310 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-14.48, 113.45) TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATCGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATTAATGCTACACTTGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCAGCAGCGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCAGCAGCGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926414 [IV-Alpha8-18B2] PRGD_OTU001c_d56fd059eb44f709e9099c702264a694 gb|KJ926414| PRGD_OTU001c_d56fd059eb44f709e9099c702264a694, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_d56fd059eb44f709e9099c702264a694, putative proteorhodopsin gene, partial cds. KJ926414 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATCGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTGATCGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCTGGATATATTAATGCTACACTTGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAGGCTGGTAAAGCAGCAGCGAAAAGTGGTAACAAAGCTTTAGTAACTGCATTCGGAGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATC---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTGATCGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAGGCTGGTAAAGCAGCAGCGAAA------AGT---GGTAACAAAGCTTTA---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926421 [IV-Alpha8-18B2] PRGD_OTU001c_e5ae1279e802c45432c3735046f8ecec gb|KJ926421| PRGD_OTU001c_e5ae1279e802c45432c3735046f8ecec, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_e5ae1279e802c45432c3735046f8ecec, putative proteorhodopsin gene, partial cds. KJ926421 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-14.48, 113.45) TTAATCACAGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTTATCGGTGGATACTTAGGTGAAGCAGGTTATATTAATGCTACACTTGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGTAACAAAGCACTAGTAACAGCATTCGGAGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTTATCGGTGGATACTTAGGTGAA---------GCA------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGTAACAAAGCACTA---GTA---ACA---GCA---TTC---GGA---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926361 [IV-Alpha8-18B2] PRGD_OTU001c_6de6a79e3f413f9d803204ba48c5b31f gb|KJ926361| PRGD_OTU001c_6de6a79e3f413f9d803204ba48c5b31f, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_6de6a79e3f413f9d803204ba48c5b31f, putative proteorhodopsin gene, partial cds. KJ926361 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683) TTAATCACTGTACCTTTACAGATGGTAGAATTTTACTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGTATGTTCTGGAGATTGCTATTAGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCTTTACAGATGGTAGAATTTTACTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGTATG------------------------------------TTCTGGAGA---TTGCTATTAGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926394 [IV-Alpha8-18B2] PRGD_OTU001c_bab6c1195a2c63475a4a4285ee3677f6 gb|KJ926394| PRGD_OTU001c_bab6c1195a2c63475a4a4285ee3677f6, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_bab6c1195a2c63475a4a4285ee3677f6, putative proteorhodopsin gene, partial cds. KJ926394 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATAACTGTACCATTACAGATGGTAGAATTTTACTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGTATGTTCTGGAGATTATTATTAGGTTCAGTTGTAATGCTAGTCGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACTGTACCATTACAGATGGTAGAATTTTACTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGTATG------------------------------------TTCTGGAGA---TTATTATTAGGTTCAGTTGTAATGCTAGTCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926379 [IV-Alpha8-18B2] PRGD_OTU001c_94ed28e4aaf010971d7971a55d5054c9 gb|KJ926379| PRGD_OTU001c_94ed28e4aaf010971d7971a55d5054c9, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_94ed28e4aaf010971d7971a55d5054c9, putative proteorhodopsin gene, partial cds. KJ926379 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACTGTACCTTTACAGATGGTAGAATTTTACTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGTATGTTCTGGAGATTGTTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTTTCAGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTT LITVPLQMVEFYLILAAIGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCTTTACAGATGGTAGAATTTTACTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGTATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTT------TCA---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926381 [IV-Alpha8-18B2] PRGD_OTU001c_99457714ad528b401fcc223cfc6e4b1b gb|KJ926381| PRGD_OTU001c_99457714ad528b401fcc223cfc6e4b1b, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_99457714ad528b401fcc223cfc6e4b1b, putative proteorhodopsin gene, partial cds. KJ926381 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATCACTGTACCTTTACAGATGGTAGAATTTTACTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGTATGTTCTGGAGATTGTTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACTCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTT LITVPLQMVEFYLILAAIGKANSGMFWRLLLGSVVMLVGGYLGEAGYINSTLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCTTTACAGATGGTAGAATTTTACTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGTATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACTCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NS------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926339 [IV-Alpha8-18B2] PRGD_OTU001c_48358baf55695d0a836b9c2ec6536897 gb|KJ926339| PRGD_OTU001c_48358baf55695d0a836b9c2ec6536897, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_48358baf55695d0a836b9c2ec6536897, putative proteorhodopsin gene, partial cds. KJ926339 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATCACTGTACCATTACAGATGGTAGAATTTTACTTAATTCTAGCAGCTATTGGTAAAGCAAACTCAGGTATGTTCTGGAGATTATTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAGGCTGCAGCAAAAAGTGGAAACAAAGCACTTGTTACCGCTTTTGGTGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCATTACAGATGGTAGAATTTTACTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCA---GGTATG------------------------------------TTCTGGAGA---TTATTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAGGCTGCAGCAAAA------AGT---GGAAACAAAGCACTT---GTT---ACC---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926312 [IV-Alpha8-18B2] PRGD_OTU001c_1926597bbc38d8ee0697fef9c6d9850c gb|KJ926312| PRGD_OTU001c_1926597bbc38d8ee0697fef9c6d9850c, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_1926597bbc38d8ee0697fef9c6d9850c, putative proteorhodopsin gene, partial cds. KJ926312 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), English Channel (48.7717, -3.9683) TTAATCACTGTACCTTTACAGATGGTAGAATTTTACTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGTATGTTCTGGAGATTGTTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGAAACAAAGCGCTTGTTACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCTTTACAGATGGTAGAATTTTACTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGTATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCGCTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926354 [IV-Alpha8-18B2] PRGD_OTU001c_5fc0e2008a32d709c269b2bc1eee488d gb|KJ926354| PRGD_OTU001c_5fc0e2008a32d709c269b2bc1eee488d, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_5fc0e2008a32d709c269b2bc1eee488d, putative proteorhodopsin gene, partial cds. KJ926354 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-33.28, 45.35) TTAATCACTGTACCTTTACAGATGGTAGAATTTTACTTAATTCTAGCAGCTATTGGTAAAGCAAAATCTGGAATGTTCTGGAGATTGTTAATTGGTTCAATTGTGATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACGCTTGGCTTTATAGTCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGTAACAAGGCTCTTGTAACTGCGTTTGGTGCGATGAGAATGATCGTAACAGTA LITVPLQMVEFYLILAAIGKAKSGMFWRLLIGSIVMLVGGYLGEAGYINATLGFIVGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCTTTACAGATGGTAGAATTTTACTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAAATCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCAATTGTGATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACGCTTGGC---TTTATAGTCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGTAACAAGGCTCTT---GTA---ACT---GCG---TTT---GGT---GCGATG---AGAATGATCGTAACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKAKS-GM------------FWR-LLIGSIVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926349 [IV-Alpha8-18B2] PRGD_OTU001c_591e07332ef56bf7ef206ba1c94c11f6 gb|KJ926349| PRGD_OTU001c_591e07332ef56bf7ef206ba1c94c11f6, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_591e07332ef56bf7ef206ba1c94c11f6, putative proteorhodopsin gene, partial cds. KJ926349 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), English Channel (48.7717, -3.9683) TTAATCACTGTACCTTTACAGATGGTAGAATTTTACTTAATTCTAGCAGCTATTGGTAAAGCAAAATCTGGAATGTTCTGGAGATTGTTACTTGGTTCAGTTGTGATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACGCTTGGCTTTATAGTCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGTAACAAGGCTCTTGTAACTGCGTTTGGTGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKAKSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIVGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCTTTACAGATGGTAGAATTTTACTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAAATCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCAGTTGTGATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACGCTTGGC---TTTATAGTCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGTAACAAGGCTCTT---GTA---ACT---GCG---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKAKS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIVGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926320 [IV-Alpha8-18B2] PRGD_OTU001c_244d336b010e1136323fb2d1f7c46bb0 gb|KJ926320| PRGD_OTU001c_244d336b010e1136323fb2d1f7c46bb0, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_244d336b010e1136323fb2d1f7c46bb0, putative proteorhodopsin gene, partial cds. KJ926320 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATCACTGTTCCATTACAGATGGTAGAATTTTACTTAATTCTAGCAGCTATTGGTAAAGCAAATTCAGGTATGTTCTGGAGATTGTTAATTGGTTCAGTTGTTATGCTAGTAGGTGGATACTTAGGTGAAGCAGGATATATTAATGCTACACTTGGTTTCATTATTGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTTCCATTACAGATGGTAGAATTTTACTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAATTCA---GGTATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCAGTTGTTATGCTAGTAGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATTATTGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926342 [IV-Alpha8-18B2] PRGD_OTU001c_4b9a4aaa50e4842b5252d7b15b95e629 gb|KJ926342| PRGD_OTU001c_4b9a4aaa50e4842b5252d7b15b95e629, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_4b9a4aaa50e4842b5252d7b15b95e629, putative proteorhodopsin gene, partial cds. KJ926342 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45; -33.28, 45.35) TTAATCACTGTACCTTTACAGATGGTAGAATTTTACTTAATTCTAGCAGCTATTGGTAAAGCAAACTCAGGCATGTTCTGGAGATTATTAATTGGTTCAGTTGTTATGCTAGTAGGTGGATACTTAGGTGAAGCAGGATATATTAATGCTACACTTGGTTTCATTATTGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCTTTACAGATGGTAGAATTTTACTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCA---GGCATG------------------------------------TTCTGGAGA---TTATTAATTGGTTCAGTTGTTATGCTAGTAGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATTATTGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926319 [IV-Alpha8-18B2] PRGD_OTU001c_2441231f8ffdc236aa8fb09009021ab8 gb|KJ926319| PRGD_OTU001c_2441231f8ffdc236aa8fb09009021ab8, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_2441231f8ffdc236aa8fb09009021ab8, putative proteorhodopsin gene, partial cds. KJ926319 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTAACAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATTGGTGGATACTTAGGTGAAGCAGGATATATCAATGCTACACTTGGTTTCATCATTGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCACAGAAGAGTGGTAATAAAGCTCTTGTAACTGCATTTGGAGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAQKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---AACAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATTGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATTGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCACAGAAG------AGT---GGTAATAAAGCTCTT---GTA---ACT---GCA---TTT---GGA---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAQK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926363 [IV-Alpha8-18B2] PRGD_OTU001c_724caf03fade81061f415df5b52612b2 gb|KJ926363| PRGD_OTU001c_724caf03fade81061f415df5b52612b2, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_724caf03fade81061f415df5b52612b2, putative proteorhodopsin gene, partial cds. KJ926363 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATCAATGCTACACTTGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCGGGTGAAGCTGGTAAAGCTGCACAGAAGAGTGGTAACAAATCTCTTGTAACTGCATTCGGAGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAQKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCG---GGTGAAGCTGGTAAAGCTGCACAGAAG------AGT---GGTAACAAATCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAQK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926338 [IV-Alpha8-18B2] PRGD_OTU001c_47de4afd5592ed9551477f8ab7821f4d gb|KJ926338| PRGD_OTU001c_47de4afd5592ed9551477f8ab7821f4d, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_47de4afd5592ed9551477f8ab7821f4d, putative proteorhodopsin gene, partial cds. KJ926338 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCGAATTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTGATGTTAATCGGTGGATACTTAGGTGAAGCAGGTTATATTAATGCAACACTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCATCGAAGAGTGGTAACAAATCTCTTGTAACTGCATTCGGAGCAATGAGAATGATCGTTACTGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAASKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCGAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTGATGTTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------AATGCA------------------ACACTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCATCGAAG------AGT---GGTAACAAATCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAASK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926382 [IV-Alpha8-18B2] PRGD_OTU001c_9c0a7f1cbc637366d0a4eb531d182616 gb|KJ926382| PRGD_OTU001c_9c0a7f1cbc637366d0a4eb531d182616, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_9c0a7f1cbc637366d0a4eb531d182616, putative proteorhodopsin gene, partial cds. KJ926382 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTAACAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTGATGCTAATCGGTGGATACTTAGGTGAAGCGGGATATATTAATGCTACACTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCATCGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---AACAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTGATGCTAATCGGTGGATACTTAGGTGAA---------GCG------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCATCGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926353 [IV-Alpha8-18B2] PRGD_OTU001c_5e5513b02b84f568db7d2015187101e2 gb|KJ926353| PRGD_OTU001c_5e5513b02b84f568db7d2015187101e2, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_5e5513b02b84f568db7d2015187101e2, putative proteorhodopsin gene, partial cds. KJ926353 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATAACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTAACAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTGATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATTAATGCTACACTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCATCGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---AACAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTGATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCATCGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926399 [IV-Alpha8-18B2] PRGD_OTU001c_bd9cfd9a9dd330defb2600e93255076b gb|KJ926399| PRGD_OTU001c_bd9cfd9a9dd330defb2600e93255076b, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_bd9cfd9a9dd330defb2600e93255076b, putative proteorhodopsin gene, partial cds. KJ926399 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTAACAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTGATGCTTATCGGTGGATACTTAGGTGAAGCAGGATATATTAATGCTACACTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCATCGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATCGTTACTGTA LITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---AACAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTGATGCTTATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCATCGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926411 [IV-Alpha8-18B2] PRGD_OTU001c_d386ebe040b27730556c68c172fb4c1b gb|KJ926411| PRGD_OTU001c_d386ebe040b27730556c68c172fb4c1b, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_d386ebe040b27730556c68c172fb4c1b, putative proteorhodopsin gene, partial cds. KJ926411 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTAACAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTGATGCTTATCGGTGGATACTTAGGTGAAGCAGGATATATAAATGCTACACTTGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCATCGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATCGTTACTGTA LITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---AACAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTGATGCTTATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATA------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCATCGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926362 [IV-Alpha8-18B2] PRGD_OTU001c_716b1f167f3f6752d303e52a35c918c6 gb|KJ926362| PRGD_OTU001c_716b1f167f3f6752d303e52a35c918c6, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_716b1f167f3f6752d303e52a35c918c6, putative proteorhodopsin gene, partial cds. KJ926362 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATCAACAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTGATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATCAATGCTACACTTGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCATCAAAGAGTGGTAACAAATCTCTTGTAACTGCATTCGGAGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAASKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATC---AACAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTGATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCATCAAAG------AGT---GGTAACAAATCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAASK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926427 [IV-Alpha8-18B2] PRGD_OTU001c_f0bf3b612cbe9a574378fb7314c258a1 gb|KJ926427| PRGD_OTU001c_f0bf3b612cbe9a574378fb7314c258a1, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_f0bf3b612cbe9a574378fb7314c258a1, putative proteorhodopsin gene, partial cds. KJ926427 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419) TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTGATGTTAATCGGTGGATACTTAGGTGAAGCAGGATATATTAATGCTACACTTGGTTTCATCATCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTATTTTCAGGTGAAGCTGGTAAAGCTGCACAGAAGAGTGGTAATAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKAAQKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTGATGTTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGATATACATTCTTTATGAAGTA---------------TTT------TCA---GGTGAAGCTGGTAAAGCTGCACAGAAG------AGT---GGTAATAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKAAQK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926348 [IV-Alpha8-18B2] PRGD_OTU001c_5648ba1afd7bd393c6235263a414de6f gb|KJ926348| PRGD_OTU001c_5648ba1afd7bd393c6235263a414de6f, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_5648ba1afd7bd393c6235263a414de6f, putative proteorhodopsin gene, partial cds. KJ926348 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATCAATGCTACACTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCATCGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCATCGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926370 [IV-Alpha8-18B2] PRGD_OTU001c_7ac17a82af4c118a593005333f05b917 gb|KJ926370| PRGD_OTU001c_7ac17a82af4c118a593005333f05b917, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_7ac17a82af4c118a593005333f05b917, putative proteorhodopsin gene, partial cds. KJ926370 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-35.05, 23.73) TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATACATTAATGCTACACTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCATCTAAGAGCGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCATCTAAG------AGC---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926364 [IV-Alpha8-18B2] PRGD_OTU001c_741ee1715c422aa7237814953934e8bf gb|KJ926364| PRGD_OTU001c_741ee1715c422aa7237814953934e8bf, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_741ee1715c422aa7237814953934e8bf, putative proteorhodopsin gene, partial cds. KJ926364 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCTAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATACATTAATGCTACACTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCATCGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTTGGAGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCTAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCATCGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTT---GGA---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926385 [IV-Alpha8-18B2] PRGD_OTU001c_a692aad45f5c1776446b313e84eae56b gb|KJ926385| PRGD_OTU001c_a692aad45f5c1776446b313e84eae56b, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_a692aad45f5c1776446b313e84eae56b, putative proteorhodopsin gene, partial cds. KJ926385 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTTATCGGTGGATACTTGGGTGAAGCAGGATATATAAATGCTACACTAGGTTTCATCATTGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCACAGAAGAGTGGTAACAAAGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAQKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTTATCGGTGGATACTTGGGTGAA---------GCA------------------GGA------TAT---------------------------------ATA------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATCATTGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCACAGAAG------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAQK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926307 [IV-Alpha8-18B2] PRGD_OTU001c_12b68209c424925e7c0f9099c2bcbda9 gb|KJ926307| PRGD_OTU001c_12b68209c424925e7c0f9099c2bcbda9, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_12b68209c424925e7c0f9099c2bcbda9, putative proteorhodopsin gene, partial cds. KJ926307 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACTGTGCCACTACAGATGGTAGAATTCTACTTAATTCTAGCAGCTATTAACAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTTATCGGTGGTTACTTAGGTGAAGCAGGATACATCAATGCTACACTAGGTTTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGTAACAAGGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCACTACAGATGGTAGAATTCTACTTAATTCTAGCAGCT---------ATT---AACAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTTATCGGTGGTTACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGTAACAAGGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926392 [IV-Alpha8-18B2] PRGD_OTU001c_b922d320775fee31d875872926c1ca26 gb|KJ926392| PRGD_OTU001c_b922d320775fee31d875872926c1ca26, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_b922d320775fee31d875872926c1ca26, putative proteorhodopsin gene, partial cds. KJ926392 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACTGTGCCACTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATCAATAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTTATCGGTGGTTACTTAGGTGAAGCAGGATACATCAATGCTACACTAGGTTTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGTAACAAGGCTCTTGTAACTGCATTCGGAGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCACTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATC---AATAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTTATCGGTGGTTACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGTAACAAGGCTCTT---GTA---ACT---GCA---TTC---GGA---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926367 [IV-Alpha8-18B2] PRGD_OTU001c_7a0af979c6c8b234d345faf691e400b2 gb|KJ926367| PRGD_OTU001c_7a0af979c6c8b234d345faf691e400b2, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_7a0af979c6c8b234d345faf691e400b2, putative proteorhodopsin gene, partial cds. KJ926367 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAATCACTGTGCCACTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATCAATAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTTATCGGTGGTTACTTAGGTGAAGCAGGTTACATTAATGCTACACTAGGTTTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGAAACAAGGCTCTTGTAACTGCATTCGGTGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCACTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATC---AATAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTTATCGGTGGTTACTTAGGTGAA---------GCA------------------GGT------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCA---TTC---GGT---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926380 [IV-Alpha8-18B2] PRGD_OTU001c_96c11f1fa5c8a7faadde3ab569d64be7 gb|KJ926380| PRGD_OTU001c_96c11f1fa5c8a7faadde3ab569d64be7, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_96c11f1fa5c8a7faadde3ab569d64be7, putative proteorhodopsin gene, partial cds. KJ926380 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACTGTGCCACTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATCAATAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTTATCGGTGGTTACTTAGGTGAAGCAGGATACATCAATGCTACACTAGGTTTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCACTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATC---AATAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTTATCGGTGGTTACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926347 [IV-Alpha8-18B2] PRGD_OTU001c_55d5f15db6c306ae8deedf359105a9a3 gb|KJ926347| PRGD_OTU001c_55d5f15db6c306ae8deedf359105a9a3, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_55d5f15db6c306ae8deedf359105a9a3, putative proteorhodopsin gene, partial cds. KJ926347 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACTGTGCCACTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTTATCGGTGGTTACTTAGGTGAAGCAGGATACATCAATGCTACACTAGGTTTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGTAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCACTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTTATCGGTGGTTACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGTAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926321 [IV-Alpha8-18B2] PRGD_OTU001c_2494d7c5fcd2aba042d90dcd1124b1a7 gb|KJ926321| PRGD_OTU001c_2494d7c5fcd2aba042d90dcd1124b1a7, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_2494d7c5fcd2aba042d90dcd1124b1a7, putative proteorhodopsin gene, partial cds. KJ926321 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACTGTGCCACTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTAACAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTTATCGGTGGTTACTTAGGTGAAGCAGGATACATCAATGCTACACTAGGTTTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCACTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---AACAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTTATCGGTGGTTACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926305 [IV-Alpha8-18B2] PRGD_OTU001c_117fb7536167c2f766f6b35a078664e7 gb|KJ926305| PRGD_OTU001c_117fb7536167c2f766f6b35a078664e7, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_117fb7536167c2f766f6b35a078664e7, putative proteorhodopsin gene, partial cds. KJ926305 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTAACAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTGATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATCAATGCTACACTTGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---AACAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTGATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926330 [IV-Alpha8-18B2] PRGD_OTU001c_3ad01b3eb02e2bb6c948cee32163d5f0 gb|KJ926330| PRGD_OTU001c_3ad01b3eb02e2bb6c948cee32163d5f0, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_3ad01b3eb02e2bb6c948cee32163d5f0, putative proteorhodopsin gene, partial cds. KJ926330 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCAATCAATAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGTTACTTAGGTGAAGCAGGATACATCAATGCTACACTAGGTTTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGTAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCA---------ATC---AATAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGTTACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGTAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926407 [IV-Alpha8-18B2] PRGD_OTU001c_cc291a01622b39cffd89558f112a37a8 gb|KJ926407| PRGD_OTU001c_cc291a01622b39cffd89558f112a37a8, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_cc291a01622b39cffd89558f112a37a8, putative proteorhodopsin gene, partial cds. KJ926407 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTAACAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTGGTGATGCTAATCGGTGGTTACTTAGGTGAAGCAGGATACATCAATGCTACACTAGGTTTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGTAACAAGTCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATAGTTACAGTA LITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---AACAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTGGTGATGCTAATCGGTGGTTACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGTAACAAGTCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATAGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926416 [IV-Alpha8-18B2] PRGD_OTU001c_d84a6cbaf6ae7e6d63ed66d4183c571e gb|KJ926416| PRGD_OTU001c_d84a6cbaf6ae7e6d63ed66d4183c571e, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_d84a6cbaf6ae7e6d63ed66d4183c571e, putative proteorhodopsin gene, partial cds. KJ926416 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACTGTGCCATTACAGATGGTAGAATTCTACTTAATTCTAGCAGCTATTAACAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTTATCGGTGGTTACTTAGGTGAAGCAGGATACATCAATGCTACACTAGGTTTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGTAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTACTTAATTCTAGCAGCT---------ATT---AACAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTTATCGGTGGTTACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGTAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926314 [IV-Alpha8-18B2] PRGD_OTU001c_1eba2f65b0fd170e2bf14635aa95af63 gb|KJ926314| PRGD_OTU001c_1eba2f65b0fd170e2bf14635aa95af63, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_1eba2f65b0fd170e2bf14635aa95af63, putative proteorhodopsin gene, partial cds. KJ926314 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTAACAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCACTAGTAATGCTTATCGGTGGTTACTTAGGTGAAGCAGGATATATTAATGCTACACTAGGTTTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---AACAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCACTAGTAATGCTTATCGGTGGTTACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926424 [IV-Alpha8-18B2] PRGD_OTU001c_ec49f66a2d118217eef066b0605f97e9 gb|KJ926424| PRGD_OTU001c_ec49f66a2d118217eef066b0605f97e9, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_ec49f66a2d118217eef066b0605f97e9, putative proteorhodopsin gene, partial cds. KJ926424 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTAACAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGTTACTTAGGTGAAGCAGGATATATTAATGCTACACTAGGTTTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---AACAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGTTACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926415 [IV-Alpha8-18B2] PRGD_OTU001c_d7ca4bb06baa079816526ec269ffea14 gb|KJ926415| PRGD_OTU001c_d7ca4bb06baa079816526ec269ffea14, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_d7ca4bb06baa079816526ec269ffea14, putative proteorhodopsin gene, partial cds. KJ926415 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTAACAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGTTACTTAGGTGAAGCAGGATATATCAATGCTACACTAGGTTTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAGGCTGGTAAAGCTGCAGCAAAAAGTGGTAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---AACAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGTTACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAGGCTGGTAAAGCTGCAGCAAAA------AGT---GGTAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926341 [IV-Alpha8-18B2] PRGD_OTU001c_49ff09ed85821f182c1041fd69dafe65 gb|KJ926341| PRGD_OTU001c_49ff09ed85821f182c1041fd69dafe65, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_49ff09ed85821f182c1041fd69dafe65, putative proteorhodopsin gene, partial cds. KJ926341 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATCAATAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTGATGCTAATCGGTGGTTACTTAGGTGAAGCAGGATACATCAATGCTACACTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGGAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATC---AATAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTGATGCTAATCGGTGGTTACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGGAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926356 [IV-Alpha8-18B2] PRGD_OTU001c_6447cf221ec8da98eaf60a056f76348a gb|KJ926356| PRGD_OTU001c_6447cf221ec8da98eaf60a056f76348a, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_6447cf221ec8da98eaf60a056f76348a, putative proteorhodopsin gene, partial cds. KJ926356 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTAACAAAGCAAACTCTGGAATGTTCTGGAGACTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATTAATGCTACACTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGTAACAAATCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---AACAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---CTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGTAACAAATCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926376 [IV-Alpha8-18B2] PRGD_OTU001c_8b84ce4c64550c50333fe4cc33c67f10 gb|KJ926376| PRGD_OTU001c_8b84ce4c64550c50333fe4cc33c67f10, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_8b84ce4c64550c50333fe4cc33c67f10, putative proteorhodopsin gene, partial cds. KJ926376 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTAACAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGTTATATTAATGCTACACTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGTAACAAAGCTCTTGTAACTGCTTTTGGCGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCTTTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---AACAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCT---TTT---GGC---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926406 [IV-Alpha8-18B2] PRGD_OTU001c_cbf1e1d7cc0bba44bcbab0225f9b5c4e gb|KJ926406| PRGD_OTU001c_cbf1e1d7cc0bba44bcbab0225f9b5c4e, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_cbf1e1d7cc0bba44bcbab0225f9b5c4e, putative proteorhodopsin gene, partial cds. KJ926406 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTAACAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTGATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATTAATGCTACACTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGTAACAAAGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---AACAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTGATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926435 [IV-Alpha8-18B2] PRGD_OTU001c_f86423e945e142788ac242d6717fb29e gb|KJ926435| PRGD_OTU001c_f86423e945e142788ac242d6717fb29e, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_f86423e945e142788ac242d6717fb29e, putative proteorhodopsin gene, partial cds. KJ926435 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-14.48, 113.45; -33.28, 45.35) TTAATCACAGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTAACAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTGATGCTAATTGGTGGATACTTAGGTGAAGCAGGTTATATCAATGCTACACTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGTAACAAAGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---AACAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTGATGCTAATTGGTGGATACTTAGGTGAA---------GCA------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGTAACAAAGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926345 [IV-Alpha8-18B2] PRGD_OTU001c_4da1707490f5e3760b77c8660698b690 gb|KJ926345| PRGD_OTU001c_4da1707490f5e3760b77c8660698b690, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_4da1707490f5e3760b77c8660698b690, putative proteorhodopsin gene, partial cds. KJ926345 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTAACAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCGGGATACATTAATGCTACACTAGGTTTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAGGCTGCAGCGAAAAGTGGTAACAAATCTCTTGTTACAGCATTTGGTGCAATGAGAATGATAGTTACTGTC LITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---AACAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCG------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAGGCTGCAGCGAAA------AGT---GGTAACAAATCTCTT---GTT---ACA---GCA---TTT---GGT---GCAATG---AGAATGATAGTTACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926297 [IV-Alpha8-18B2] PRGD_OTU001c_061e2410a9cbcd7a6d3d15b7992ff570 gb|KJ926297| PRGD_OTU001c_061e2410a9cbcd7a6d3d15b7992ff570, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_061e2410a9cbcd7a6d3d15b7992ff570, putative proteorhodopsin gene, partial cds. KJ926297 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATTAACAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATCAATGCTACACTTGGTTTCATCATCGGAATGGCAGGTTGGATATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGAAACAAAGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATT---AACAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGATATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGAAACAAAGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926306 [IV-Alpha8-18B2] PRGD_OTU001c_120a4ca3e7d9c1c4c2a4c199e6b38ac8 gb|KJ926306| PRGD_OTU001c_120a4ca3e7d9c1c4c2a4c199e6b38ac8, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_120a4ca3e7d9c1c4c2a4c199e6b38ac8, putative proteorhodopsin gene, partial cds. KJ926306 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTAATCACTGTGCCACTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTAACAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTGATGCTAATCGGTGGATACTTAGGTGAAGCAGGATACATTAATGCTACACTAGGTTTCATCATCGGAATGGCAGGTTGGGTATATATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCACTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---AACAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTGATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATATATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926409 [IV-Alpha8-18B2] PRGD_OTU001c_ce13525f83298a0888bc07a0d4910ff9 gb|KJ926409| PRGD_OTU001c_ce13525f83298a0888bc07a0d4910ff9, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_ce13525f83298a0888bc07a0d4910ff9, putative proteorhodopsin gene, partial cds. KJ926409 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATCAATAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATCAATGCTACACTTGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATC---AATAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926423 [IV-Alpha8-18B2] PRGD_OTU001c_ea7cdde9a910c03159ae4700ddde8cf9 gb|KJ926423| PRGD_OTU001c_ea7cdde9a910c03159ae4700ddde8cf9, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_ea7cdde9a910c03159ae4700ddde8cf9, putative proteorhodopsin gene, partial cds. KJ926423 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAATCACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATTAACAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATACATTAATGCTACACTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGTAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATT---AACAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGTAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926431 [IV-Alpha8-18B2] PRGD_OTU001c_f48ffadbd1fa29167d2022036a0815a8 gb|KJ926431| PRGD_OTU001c_f48ffadbd1fa29167d2022036a0815a8, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_f48ffadbd1fa29167d2022036a0815a8, putative proteorhodopsin gene, partial cds. KJ926431 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAATCACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCTATTAACAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATACATTAATGCTACATTAGGTTTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTTTATTTAATTCTAGCAGCT---------ATT---AACAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACATTAGGT---TTCATCATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926340 [IV-Alpha8-18B2] PRGD_OTU001c_48b9d440bb39937e34d042de0be1cafc gb|KJ926340| PRGD_OTU001c_48b9d440bb39937e34d042de0be1cafc, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_48b9d440bb39937e34d042de0be1cafc, putative proteorhodopsin gene, partial cds. KJ926340 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTAACAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATTAATGCTACACTTGGTTTCATCATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGTAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---AACAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGTAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926369 [IV-Alpha8-18B2] PRGD_OTU001c_7a51d3d7a2ad37926664ae0ba295842b gb|KJ926369| PRGD_OTU001c_7a51d3d7a2ad37926664ae0ba295842b, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_7a51d3d7a2ad37926664ae0ba295842b, putative proteorhodopsin gene, partial cds. KJ926369 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTAACAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTGATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATTAATGCTACACTTGGTTTCATCATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGTAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILAAINKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---AACAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTGATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATCATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGTAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-NKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926378 [IV-Alpha8-18B2] PRGD_OTU001c_925c777b85e442e7c00e44cd531cd9de gb|KJ926378| PRGD_OTU001c_925c777b85e442e7c00e44cd531cd9de, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_925c777b85e442e7c00e44cd531cd9de, putative proteorhodopsin gene, partial cds. KJ926378 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATACATTAATGCTACACTAGGTTTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAATCTGGTAAAGCTGCAGCAAAAAGTGGTAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGESGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAATCTGGTAAAGCTGCAGCAAAA------AGT---GGTAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GESGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926300 [IV-Alpha8-18B2] PRGD_OTU001c_0919a2d33f8b976b9ce31b1e57243aab gb|KJ926300| PRGD_OTU001c_0919a2d33f8b976b9ce31b1e57243aab, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_0919a2d33f8b976b9ce31b1e57243aab, putative proteorhodopsin gene, partial cds. KJ926300 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGCTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATCAATGCTACACTTGGTTTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAATCTGGTAAAGCTGCAGCAAAAAGTGGTAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGESGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGCTAATTGGTTCATTAGTAATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAATCTGGTAAAGCTGCAGCAAAA------AGT---GGTAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GESGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926391 [IV-Alpha8-18B2] PRGD_OTU001c_b7fecfadc859874b3b6217fddd715938 gb|KJ926391| PRGD_OTU001c_b7fecfadc859874b3b6217fddd715938, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_b7fecfadc859874b3b6217fddd715938, putative proteorhodopsin gene, partial cds. KJ926391 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCTATTGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTGATGCTAATCGGTGGATACTTAGGTGAAGCAGGATATATCAACGCTACACTTGGTTTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCGAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAGATGGTAGAATTCTATTTAATTCTAGCAGCT---------ATT---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTGATGCTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGAATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCGAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926355 [IV-Alpha8-18B2] PRGD_OTU001c_6216d5405c9b75c5ecd0fd5bf4803fc3 gb|KJ926355| PRGD_OTU001c_6216d5405c9b75c5ecd0fd5bf4803fc3, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_6216d5405c9b75c5ecd0fd5bf4803fc3, putative proteorhodopsin gene, partial cds. KJ926355 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) TTAATTACTGTGCCACTACAAATGGTTGAATTCTATTTAATTCTATCTGCTGTAGGTAAAGCAAATTCAGGAATGTTCTGGAGATTGTTACTTGGATCAGTTGTTATGCTAGTAGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAACATTCTCTGGTGAAGCAGGTAAAGCTGCAGCAAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILSAVGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYETFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCACTACAAATGGTTGAATTCTATTTAATTCTATCTGCT---------GTA---GGTAAAGCAAATTCA---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGATCAGTTGTTATGCTAGTAGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAACA---------------TTC------TCT---GGTGAAGCAGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYET-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926296 [IV-Alpha8-18B2] PRGD_OTU001c_033e60e309dca6986b8081b4e3776b7a gb|KJ926296| PRGD_OTU001c_033e60e309dca6986b8081b4e3776b7a, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_033e60e309dca6986b8081b4e3776b7a, putative proteorhodopsin gene, partial cds. KJ926296 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), English Channel (48.7717, -3.9683) TTAATTACTGTGCCACTACAAATGGTTGAATTCTATTTAATTCTATCTGCTGTAGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTACTTGGTTCAATAGTTATGCTAGTAGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTATAATCGGTATGGCAGGTTGGATCTATATTCTTTATGAAATATTTTCAGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGAAACAAAGCTCTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILSAVGKANSGMFWRLLLGSIVMLVGGYLGEAGYINATLGFIIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCACTACAAATGGTTGAATTCTATTTAATTCTATCTGCT---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCAATAGTTATGCTAGTAGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTATAATCGGTATGGCAGGTTGGATCTATATTCTTTATGAAATA---------------TTT------TCA---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSIVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926388 [IV-Alpha8-18B2] PRGD_OTU001c_a914275a78a829df280ac90b3add8261 gb|KJ926388| PRGD_OTU001c_a914275a78a829df280ac90b3add8261, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_a914275a78a829df280ac90b3add8261, putative proteorhodopsin gene, partial cds. KJ926388 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) TTAATTACTGTGCCACTACAAATGGTTGAATTCTATTTAATTCTATCTGCTGTAGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTACTTGGTTCAATAGTTATGCTAGTAGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATATTTTCAGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGAAACAAAGCTCTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILSAVGKANSGMFWRLLLGSIVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCACTACAAATGGTTGAATTCTATTTAATTCTATCTGCT---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCAATAGTTATGCTAGTAGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTT------TCA---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSIVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926398 [IV-Alpha8-18B2] PRGD_OTU001c_bd6cd223b466998365eb1d287498fffd gb|KJ926398| PRGD_OTU001c_bd6cd223b466998365eb1d287498fffd, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_bd6cd223b466998365eb1d287498fffd, putative proteorhodopsin gene, partial cds. KJ926398 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683), Indian Ocean (-33.28, 45.35) TTAATCACTGTACCACTACAAATGGTTGAATTTTATTTAATTCTATCAGCAGTAGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGCTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGTAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILSAVGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCACTACAAATGGTTGAATTTTATTTAATTCTATCAGCA---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGCTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGTAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926298 [IV-Alpha8-18B2] PRGD_OTU001c_06dc94ee236284562014c746235e4f16 gb|KJ926298| PRGD_OTU001c_06dc94ee236284562014c746235e4f16, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_06dc94ee236284562014c746235e4f16, putative proteorhodopsin gene, partial cds. KJ926298 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACAGTTCCATTACAAATGGTTGAATTCTATTTAATTCTTGCTGCCATTGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTACTTGGTTCAGTTGTAATGCTAGTAGGTGGATACTTAGGAGAAGCCGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAGCTGCTGCAAAAAGTGGAAACAAAGCACTTGTTACCGCATTTGGAGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTACAAATGGTTGAATTCTATTTAATTCTTGCTGCC---------ATT---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCAGTTGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCC------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAGCTGCTGCAAAA------AGT---GGAAACAAAGCACTT---GTT---ACC---GCA---TTT---GGA---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926326 [IV-Alpha8-18B2] PRGD_OTU001c_31c3998a8336d17a5c8cbce17c69a5c6 gb|KJ926326| PRGD_OTU001c_31c3998a8336d17a5c8cbce17c69a5c6, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_31c3998a8336d17a5c8cbce17c69a5c6, putative proteorhodopsin gene, partial cds. KJ926326 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACAGTTCCATTACAAATGGTTGAATTCTATTTAATTCTTGCGGCCATTGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTACTTGGTTCAGTTGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCTGCAAAAAGTGGAAACAAAGCACTTGTTACTGCATTTGGCGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTACAAATGGTTGAATTCTATTTAATTCTTGCGGCC---------ATT---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCAGTTGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTGCAAAA------AGT---GGAAACAAAGCACTT---GTT---ACT---GCA---TTT---GGC---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926343 [IV-Alpha8-18B2] PRGD_OTU001c_4c194ac6f9074d7afdbfc3c1b6df2884 gb|KJ926343| PRGD_OTU001c_4c194ac6f9074d7afdbfc3c1b6df2884, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_4c194ac6f9074d7afdbfc3c1b6df2884, putative proteorhodopsin gene, partial cds. KJ926343 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73) TTAATTACAGTTCCATTACAAATGGTTGAATTCTATTTAATTCTTGCTGCCATAGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTACTTGGTTCAGTTGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCTGCAAAAAGTGGAAACAAAGCACTTGTTACCGCATTTGGAGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTACAAATGGTTGAATTCTATTTAATTCTTGCTGCC---------ATA---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCAGTTGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTGCAAAA------AGT---GGAAACAAAGCACTT---GTT---ACC---GCA---TTT---GGA---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926403 [IV-Alpha8-18B2] PRGD_OTU001c_c22363de44974db0363d2794671694d9 gb|KJ926403| PRGD_OTU001c_c22363de44974db0363d2794671694d9, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_c22363de44974db0363d2794671694d9, putative proteorhodopsin gene, partial cds. KJ926403 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATTACAGTTCCACTACAAATGGTGGAATTCTACTTAATTCTTGCTGCCATAGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTACTTGGTTCAGTTGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCTGCAAAAAGTGGAAACAAAGCACTTGTTACCGCATTTGGAGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILAAIGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTTCCACTACAAATGGTGGAATTCTACTTAATTCTTGCTGCC---------ATA---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCAGTTGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTGCAAAA------AGT---GGAAACAAAGCACTT---GTT---ACC---GCA---TTT---GGA---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---I-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926337 [IV-Alpha8-18B2] PRGD_OTU001c_46fe723313363a75c014903d28924577 gb|KJ926337| PRGD_OTU001c_46fe723313363a75c014903d28924577, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_46fe723313363a75c014903d28924577, putative proteorhodopsin gene, partial cds. KJ926337 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTAATTACTGTTCCACTACAAATGGTTGAATTTTACTTAATTCTATCAGCTGTAGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTACTTGGTTCATTGGTAATGTTAATCGGTGGATATTTAGGTGAAGCTGGATACATCAACTCAACACTTGGTTTCATTATTGGAATGGCAGGTTGGATATACATTCTGTATGAAATATTTTCAGGTGAGGCTGGTAAAGCTGCAGCAAAAAGTGGAAACAAAGCACTTGTAACTGCTTTTGGCGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILSAVGKANSGMFWRLLLGSLVMLIGGYLGEAGYINSTLGFIIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTTCCACTACAAATGGTTGAATTTTACTTAATTCTATCAGCT---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCATTGGTAATGTTAATCGGTGGATATTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACTCA------------------ACACTTGGT---TTCATTATTGGAATGGCAGGTTGGATATACATTCTGTATGAAATA---------------TTT------TCA---GGTGAGGCTGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCACTT---GTA---ACT---GCT---TTT---GGC---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NS------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926422 [IV-Alpha8-18B2] PRGD_OTU001c_e88ab82a5b3adde38b165883b9a74dbe gb|KJ926422| PRGD_OTU001c_e88ab82a5b3adde38b165883b9a74dbe, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_e88ab82a5b3adde38b165883b9a74dbe, putative proteorhodopsin gene, partial cds. KJ926422 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), North Pacific Ocean (50.06, -139.53), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTAATTACTGTACCACTACAAATGGTTGAATTTTACTTAATTCTATCAGCTGTAGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTACTTGGTTCATTGGTAATGTTAATCGGTGGATATTTAGGTGAAGCTGGATACATCAACTCAACACTTGGTTTCATTATTGGAATGGCAGGTTGGATATACATTCTATATGAAATATTTTCAGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGAAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILSAVGKANSGMFWRLLLGSLVMLIGGYLGEAGYINSTLGFIIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCACTACAAATGGTTGAATTTTACTTAATTCTATCAGCT---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCATTGGTAATGTTAATCGGTGGATATTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACTCA------------------ACACTTGGT---TTCATTATTGGAATGGCAGGTTGGATATACATTCTATATGAAATA---------------TTT------TCA---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NS------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926351 [IV-Alpha8-18B2] PRGD_OTU001c_5c9ef74d346d48593a237b38e1e0169f gb|KJ926351| PRGD_OTU001c_5c9ef74d346d48593a237b38e1e0169f, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_5c9ef74d346d48593a237b38e1e0169f, putative proteorhodopsin gene, partial cds. KJ926351 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACTGTGCCACTACAAATGGTTGAATTCTATTTAATTCTATCAGCTGTAGGTAAAGCAAATTCAGGAATGTTCTGGAGATTGCTAATAGGTTCATTAGTAATGTTAATTGGTGGATACTTAGGTGAAGCAGGTTACATCAATGAAACACTTGGTTTCATAGTTGGAATGGCAGGTTGGATTTACATTCTATATGAAATATTTTCAGGTGAAGCTGGAAAAGCTGCTGCTAAAAGTGGAAACAAGTCTCTTGTTACTGCTTTTGGAGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILSAVGKANSGMFWRLLIGSLVMLIGGYLGEAGYINETLGFIVGMAGWIYILYEIFSGEAGKAAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCACTACAAATGGTTGAATTCTATTTAATTCTATCAGCT---------GTA---GGTAAAGCAAATTCA---GGAATG------------------------------------TTCTGGAGA---TTGCTAATAGGTTCATTAGTAATGTTAATTGGTGGATACTTAGGTGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGAA------------------ACACTTGGT---TTCATAGTTGGAATGGCAGGTTGGATTTACATTCTATATGAAATA---------------TTT------TCA---GGTGAAGCTGGAAAAGCTGCTGCTAAA------AGT---GGAAACAAGTCTCTT---GTT---ACT---GCT---TTT---GGA---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NE------TLG-FIVGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926375 [IV-Alpha8-18B2] PRGD_OTU001c_86fd83710adf39b8ab405c9ec2e5e31d gb|KJ926375| PRGD_OTU001c_86fd83710adf39b8ab405c9ec2e5e31d, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_86fd83710adf39b8ab405c9ec2e5e31d, putative proteorhodopsin gene, partial cds. KJ926375 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781), English Channel (48.7717, -3.9683) CTAATTACTGTGCCACTACAAATGGTTGAATTTTATTTAATTCTATCTGCTGTAGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCAGGATACATCAATGCTACACTAGGTTTTATTATCGGTATGGCTGGTTGGATATACATTCTTTATGAAGTATTTTCAGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGAAACAAAGCTCTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILSAVGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTGCCACTACAAATGGTTGAATTTTATTTAATTCTATCTGCT---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTTATTATCGGTATGGCTGGTTGGATATACATTCTTTATGAAGTA---------------TTT------TCA---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926429 [IV-Alpha8-18B2] PRGD_OTU001c_f26055860e1783f8484d9f5caea986c2 gb|KJ926429| PRGD_OTU001c_f26055860e1783f8484d9f5caea986c2, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_f26055860e1783f8484d9f5caea986c2, putative proteorhodopsin gene, partial cds. KJ926429 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683) TTAATTACTGTGCCACTACAAATGGTTGAATTTTATTTAATTCTATCTGCTGTAGGTAAAGCAAACTCTGGAATGTTCTGGAGATTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCAGGATACATCAATGCTACACTAGGTTTCATTATCGGTATGGCAGGTTGGATATACATTCTTTATGAAGTATTTTCAGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGGAACAAAGCTCTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILSAVGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCACTACAAATGGTTGAATTTTATTTAATTCTATCTGCT---------GTA---GGTAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATTATCGGTATGGCAGGTTGGATATACATTCTTTATGAAGTA---------------TTT------TCA---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGGAACAAAGCTCTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926358 [IV-Alpha8-18B2] PRGD_OTU001c_681553ad2b82d8ecc617658e26d89eb6 gb|KJ926358| PRGD_OTU001c_681553ad2b82d8ecc617658e26d89eb6, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_681553ad2b82d8ecc617658e26d89eb6, putative proteorhodopsin gene, partial cds. KJ926358 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) TTAATTACTGTGCCTCTACAAATGGTAGAATTCTATTTAATTCTATCTGCTGTAGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATTGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAAGCTGCAGCAAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILSAVGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCTCTACAAATGGTAGAATTCTATTTAATTCTATCTGCT---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATTGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926437 [IV-Alpha8-18B2] PRGD_OTU001c_f90ad43bec6070d91a56586e687aa4d1 gb|KJ926437| PRGD_OTU001c_f90ad43bec6070d91a56586e687aa4d1, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_f90ad43bec6070d91a56586e687aa4d1, putative proteorhodopsin gene, partial cds. KJ926437 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACTGTGCCTCTACAAATGGTAGAATTCTATTTAATACTATCTGCTGTAGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGTTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATTGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAAGCTGCAGCAAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTA LITVPLQMVEFYLILSAVGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCTCTACAAATGGTAGAATTCTATTTAATACTATCTGCT---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATTGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926333 [IV-Alpha8-18B2] PRGD_OTU001c_3da3783476949ca4a9f75db1b029e4cc gb|KJ926333| PRGD_OTU001c_3da3783476949ca4a9f75db1b029e4cc, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_3da3783476949ca4a9f75db1b029e4cc, putative proteorhodopsin gene, partial cds. KJ926333 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -33.28, 45.35) TTAATTACTGTGCCTCTACAAATGGTTGAATTCTATTTAATTCTATCTGCTGTAGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGCTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAAGCTGCAGCAAAAAGTGGAAACAAGGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILSAVGKANSGMFWRLLLGSVVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCTCTACAAATGGTTGAATTCTATTTAATTCTATCTGCT---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGCTACTTGGTTCAGTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAGGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926396 [IV-Alpha8-18B2] PRGD_OTU001c_bc29aa30b50b705f7c56aa89aa5cc0d5 gb|KJ926396| PRGD_OTU001c_bc29aa30b50b705f7c56aa89aa5cc0d5, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_bc29aa30b50b705f7c56aa89aa5cc0d5, putative proteorhodopsin gene, partial cds. KJ926396 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTGCCACTACAAATGGTAGAATTCTATTTAATTCTATCAGCAGTAGGTAAAGCAAATTCTGGAATGTTCTGGAGATTGCTACTTGGTTCAATAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCAGCAAAAAGTGGAAACAAAGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILSAVGKANSGMFWRLLLGSIVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCACTACAAATGGTAGAATTCTATTTAATTCTATCAGCA---------GTA---GGTAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGCTACTTGGTTCAATAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSIVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926433 [IV-Alpha8-18B2] PRGD_OTU001c_f7cc05c57dcb2d53eab8879063ae23e3 gb|KJ926433| PRGD_OTU001c_f7cc05c57dcb2d53eab8879063ae23e3, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_f7cc05c57dcb2d53eab8879063ae23e3, putative proteorhodopsin gene, partial cds. KJ926433 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683) TTAATTACAGTGCCATTACAGATGGTTGAATTTTATTTAATTCTATCAGCTGTAGGTAAAGCTAATTCTGGAATGTTCTGGAGATTATTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTAGGTTTCATTATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTATTTTCAGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGAAACAAAGCGCTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILSAVGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTACAGATGGTTGAATTTTATTTAATTCTATCAGCT---------GTA---GGTAAAGCTAATTCT---GGAATG------------------------------------TTCTGGAGA---TTATTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATCTTGTATGAAGTA---------------TTT------TCA---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCGCTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926417 [IV-Alpha8-18B2] PRGD_OTU001c_dceda93608290a057f31c3a4094274fc gb|KJ926417| PRGD_OTU001c_dceda93608290a057f31c3a4094274fc, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_dceda93608290a057f31c3a4094274fc, putative proteorhodopsin gene, partial cds. KJ926417 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTGCCATTACAGATGGTAGAATTTTATTTAATTTTATCAGCTGTAGGTAAAGCTAATTCTGGAATGTTCTGGAGATTGTTACTTGGATCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCAGGATATATCAATGCTACACTAGGTTTCATTATCGGTATGGCTGGATGGATATATATTCTTTATGAAATATTTTCAGGTGAAGCTGGTAAAGCTGCAGCAAAAAGTGGAAACAAAGCTCTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTA LITVPLQMVEFYLILSAVGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIIGMAGWIYILYEIFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTACAGATGGTAGAATTTTATTTAATTTTATCAGCT---------GTA---GGTAAAGCTAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGATCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCA------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTAGGT---TTCATTATCGGTATGGCTGGATGGATATATATTCTTTATGAAATA---------------TTT------TCA---GGTGAAGCTGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926426 [IV-Alpha8-18B2] PRGD_OTU001c_ef2f72f10d5190a211713fc58cd3eefa gb|KJ926426| PRGD_OTU001c_ef2f72f10d5190a211713fc58cd3eefa, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_ef2f72f10d5190a211713fc58cd3eefa, putative proteorhodopsin gene, partial cds. KJ926426 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACAGTGCCATTGCAGATGGTTGAATTCTATTTAATTCTATCAGCTGTAGGTAAGGCAAATTCTGGAATGTTCTGGAGATTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAAGCGGGATATATCAATGCTACACTAGGATTCATTATTGGTATGGCTGGTTGGATATACATTCTTTATGAAGTATTTTCAGGCGAGGCTGGTAAAGCTGCAGCAAAAAGTGGAAACAAAGCTCTTGTAACTGCTTTTGGTGCAATGAGAATGATAGTTACAGTA LITVPLQMVEFYLILSAVGKANSGMFWRLLLGSLVMLIGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTGCAGATGGTTGAATTCTATTTAATTCTATCAGCT---------GTA---GGTAAGGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTACTTGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGTGAA---------GCG------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTAGGA---TTCATTATTGGTATGGCTGGTTGGATATACATTCTTTATGAAGTA---------------TTT------TCA---GGCGAGGCTGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATAGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILSA---V-GKANS-GM------------FWR-LLLGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926368 [IV-Alpha8-18B2] PRGD_OTU001c_7a2bdf9d459b51d0d86058dce5b4e596 gb|KJ926368| PRGD_OTU001c_7a2bdf9d459b51d0d86058dce5b4e596, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_7a2bdf9d459b51d0d86058dce5b4e596, putative proteorhodopsin gene, partial cds. KJ926368 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATTACTGTGCCATTACAGATGGTAGAATTCTACTTAATTCTAGTAGCAGTAAGAAAAGCAAATTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGAGGATACTTAGGAGAAGCTGGATACATCAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGATTTACATTCTATATGAAATATTCTCTGGTGAAGCTGGAAGAGCTGCTGCTAAAAGCGGTAACAAAGCTCTTGTAACTGCGTTCGGTGCAATGAGAATGATTGTAACTGTA LITVPLQMVEFYLILVAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGRAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCATTACAGATGGTAGAATTCTACTTAATTCTAGTAGCA---------GTA---AGAAAAGCAAATTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGAGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGATTTACATTCTATATGAAATA---------------TTC------TCT---GGTGAAGCTGGAAGAGCTGCTGCTAAA------AGC---GGTAACAAAGCTCTT---GTA---ACT---GCG---TTC---GGT---GCAATG---AGAATGATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILVA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGRAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-18B2]_KJ926373 [IV-Alpha8-18B2] PRGD_OTU001c_81565a1bd2c96af5ec55370b7bffea9c gb|KJ926373| PRGD_OTU001c_81565a1bd2c96af5ec55370b7bffea9c, putative proteorhodopsin gene, partial cds. PRGD_OTU001c_81565a1bd2c96af5ec55370b7bffea9c, putative proteorhodopsin gene, partial cds. KJ926373 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/MedeBAC18B2-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 MedeBAC18B2-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTAATTACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATGTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAGCTGCTGCTAAGAGCGGAAACAAAGCTCTTGTAACTGCGTTCGGTGCAATGAGAATGATTGTAACTGTA LITVPLQMVEFYLILVAVRKANSGMFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCATTACAGATGGTAGAATTTTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATG------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAGCTGCTGCTAAG------AGC---GGAAACAAAGCTCTT---GTA---ACT---GCG---TTC---GGT---GCAATG---AGAATGATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILVA---V-RKANS-GM------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-b]_KJ926443 [IV-Alpha8-b] PRGD_OTU001d_978e72a04328ba534f6e2b3567e4b204 gb|KJ926443| PRGD_OTU001d_978e72a04328ba534f6e2b3567e4b204, putative proteorhodopsin gene, partial cds. PRGD_OTU001d_978e72a04328ba534f6e2b3567e4b204, putative proteorhodopsin gene, partial cds. KJ926443 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/B subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -33.28, 45.35) TTAATTACTGTGCCATTACAGATGATAGAATTCTACTTAATTCTAGTAGCTGTAAGAAAAGCAAATTCTGGAATTTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCTGCCAAAAGTGGTAACAAATCTCTAGTAACTGCTTTCAGTGCTATGAGAATGATCGTTACAGTT LITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAAAKSGNKSLVTAFSAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCATTACAGATGATAGAATTCTACTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAATTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTGCCAAA------AGT---GGTAACAAATCTCTA---GTA---ACT---GCT---TTC---AGT---GCTATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKSL-V-T-A-F-S-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-b]_KJ926445 [IV-Alpha8-b] PRGD_OTU001d_fc3723e464b31cd9a8512270cc69e8f1 gb|KJ926445| PRGD_OTU001d_fc3723e464b31cd9a8512270cc69e8f1, putative proteorhodopsin gene, partial cds. PRGD_OTU001d_fc3723e464b31cd9a8512270cc69e8f1, putative proteorhodopsin gene, partial cds. KJ926445 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/B subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175) TTAATTACTGTACCATTACAGATGATAGAATTTTACTTAATTCTAGTAGCTGTAAGAAAAGCAAGCTCTGGTATTTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCTGCCAAAAGTGGTAACAAAGCTCTAGTAACTGCTTTCAGTGCTATGAGAATGATCGTTACAGTT LITVPLQMIEFYLILVAVRKASSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAAAKSGNKALVTAFSAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCATTACAGATGATAGAATTTTACTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAGCTCT---GGTATT------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTGCCAAA------AGT---GGTAACAAAGCTCTA---GTA---ACT---GCT---TTC---AGT---GCTATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILVA---V-RKASS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-S-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-b]_KJ926438 [IV-Alpha8-b] PRGD_OTU001d_otuREP_0dec9820f2f08457445d83a205e2c3dc gb|KJ926438| PRGD_OTU001d_otuREP_0dec9820f2f08457445d83a205e2c3dc, putative proteorhodopsin gene, partial cds. PRGD_OTU001d_otuREP_0dec9820f2f08457445d83a205e2c3dc, putative proteorhodopsin gene, partial cds. KJ926438 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/B subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATTACTGTGCCGTTACAGATGATAGAATTTTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATTTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTATAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAGCTGCTGCGAAAAGCGGTAACAAAGCTCTTGTCACTGCATTCAGTGCAATGAGAATGATCGTTACAGTT LITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFSAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTGCCGTTACAGATGATAGAATTTTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTATAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTGCGAAA------AGC---GGTAACAAAGCTCTT---GTC---ACT---GCA---TTC---AGT---GCAATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-S-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-b]_KJ926441 [IV-Alpha8-b] PRGD_OTU001d_7cd6db9b1dd75dd71eecbe8288fcff43 gb|KJ926441| PRGD_OTU001d_7cd6db9b1dd75dd71eecbe8288fcff43, putative proteorhodopsin gene, partial cds. PRGD_OTU001d_7cd6db9b1dd75dd71eecbe8288fcff43, putative proteorhodopsin gene, partial cds. KJ926441 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/B subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) TTAATTACTGTGCCACTACAGATGATAGAATTTTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATTTTCTGGAGATTGTTAATTGGTTCATTGGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAGGCTGCTTCAAAAAGTGGAAACAAAGCTCTTGTTACTGCTTTTGGTGCAATGAGAATGATTGTTACAGTA LITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEVFSGEAGKAASKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCACTACAGATGATAGAATTTTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTGGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAGGCTGCTTCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-b]_KJ926442 [IV-Alpha8-b] PRGD_OTU001d_8170b4a9c214325cc224a3ac02e636d2 gb|KJ926442| PRGD_OTU001d_8170b4a9c214325cc224a3ac02e636d2, putative proteorhodopsin gene, partial cds. PRGD_OTU001d_8170b4a9c214325cc224a3ac02e636d2, putative proteorhodopsin gene, partial cds. KJ926442 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/B subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACTGTTCCATTACAGATGATAGAATTTTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATTTTCTGGAGATTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCTTCTAAAAGTGGAAACAAAGCTCTTGTCACTGCATTTAGTGCAATGAGAATGATTGTTACAGTA LITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEIFSGEAGKAASKSGNKALVTAFSAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTTCCATTACAGATGATAGAATTTTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTTCTAAA------AGT---GGAAACAAAGCTCTT---GTC---ACT---GCA---TTT---AGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEI-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-S-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-b]_KJ926440 [IV-Alpha8-b] PRGD_OTU001d_2e91ddaf640eb6b49806ad2eba777963 gb|KJ926440| PRGD_OTU001d_2e91ddaf640eb6b49806ad2eba777963, putative proteorhodopsin gene, partial cds. PRGD_OTU001d_2e91ddaf640eb6b49806ad2eba777963, putative proteorhodopsin gene, partial cds. KJ926440 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/B subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACTGTGCCTTTACAGATGATAGAATTTTATTTAATTCTAGTAGCTGTAAGAAAAGCAAATTCAGGAATTTTCTGGAGATTGCTAATTGGTTCATTGGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCTTCTAAAAGCGGAAACAAAGCTCTTGTTACTGCATTTAGTGCAATGAGAATGATTGTTACAGTA LITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAASKSGNKALVTAFSAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCTTTACAGATGATAGAATTTTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAATTCA---GGAATT------------------------------------TTCTGGAGA---TTGCTAATTGGTTCATTGGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTTCTAAA------AGC---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---AGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-S-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-b]_KJ926444 [IV-Alpha8-b] PRGD_OTU001d_da9ee8364e2351762c5e1bc7edaaea96 gb|KJ926444| PRGD_OTU001d_da9ee8364e2351762c5e1bc7edaaea96, putative proteorhodopsin gene, partial cds. PRGD_OTU001d_da9ee8364e2351762c5e1bc7edaaea96, putative proteorhodopsin gene, partial cds. KJ926444 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/B subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACTGTGCCATTACAGATGATAGAATTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGTATTTTCTGGAGATTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCTTCTAAAAGTGGAAACAAAGCTCTTGTTACCGCGTTTAGTGCAATGAGAATGATTGTTACAGTA LITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEIFSGEAGKAASKSGNKALVTAFSAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCATTACAGATGATAGAATTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGTATT------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTTCTAAA------AGT---GGAAACAAAGCTCTT---GTT---ACC---GCG---TTT---AGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEI-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-S-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-b]_KJ926439 [IV-Alpha8-b] PRGD_OTU001d_1ce2a4c22cf548d3299d3c84444d8c9d gb|KJ926439| PRGD_OTU001d_1ce2a4c22cf548d3299d3c84444d8c9d, putative proteorhodopsin gene, partial cds. PRGD_OTU001d_1ce2a4c22cf548d3299d3c84444d8c9d, putative proteorhodopsin gene, partial cds. KJ926439 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/B subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACTGTGCCATTACAGATGATAGAATTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATTTTCTGGAGATTGTTAATTGGTTCACTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGATTTATAATCGGTATGGCAGGTTGGGTATACATTCTATATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCTTCTAAAAGTGGAAACAAGGCTCTTGTTACTGCGTTTAGTGCAATGAGAATGATTGTTACAGTA LITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAASKSGNKALVTAFSAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCATTACAGATGATAGAATTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGTTCACTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGA---TTTATAATCGGTATGGCAGGTTGGGTATACATTCTATATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCTTCTAAA------AGT---GGAAACAAGGCTCTT---GTT---ACT---GCG---TTT---AGT---GCAATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-S-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-a]_KJ926452 [IV-Alpha8-a] PRGD_OTU001e_b05ddc9571670f6b0fa77134464bf1bb gb|KJ926452| PRGD_OTU001e_b05ddc9571670f6b0fa77134464bf1bb, putative proteorhodopsin gene, partial cds. PRGD_OTU001e_b05ddc9571670f6b0fa77134464bf1bb, putative proteorhodopsin gene, partial cds. KJ926452 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/A subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATTACTGTGCCACTACAGATGATAGAATTCTACTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATTTTCTGGAGATTGTTAATTGGTTCACTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCTTCAAAAAGTGGAAACAAGGCTCTTGTTACTGCTTTTGGTGCGATGAGAATGATTGTTACAGTA LITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAASKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCACTACAGATGATAGAATTCTACTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGTTCACTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTTCAAAA------AGT---GGAAACAAGGCTCTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-a]_KJ926448 [IV-Alpha8-a] PRGD_OTU001e_73abf7033855cc250745239fccaf51c0 gb|KJ926448| PRGD_OTU001e_73abf7033855cc250745239fccaf51c0, putative proteorhodopsin gene, partial cds. PRGD_OTU001e_73abf7033855cc250745239fccaf51c0, putative proteorhodopsin gene, partial cds. KJ926448 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/A subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) TTAATTACTGTGCCATTACAGATGATAGAGTTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAATTCTGGAATTTTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCTGCTAAGAGCGGAAATAAAGCTCTAGTAACTGCGTTCAGTGCAATGAGAATGATTGTAACTGTA LITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAAAKSGNKALVTAFSAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAATTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTGCTAAG------AGC---GGAAATAAAGCTCTA---GTA---ACT---GCG---TTC---AGT---GCAATG---AGAATGATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-S-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-a]_KJ926449 [IV-Alpha8-a] PRGD_OTU001e_79c174d525a7252a2d906897a82ea286 gb|KJ926449| PRGD_OTU001e_79c174d525a7252a2d906897a82ea286, putative proteorhodopsin gene, partial cds. PRGD_OTU001e_79c174d525a7252a2d906897a82ea286, putative proteorhodopsin gene, partial cds. KJ926449 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/A subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (71.501, 19.8025), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAATTACTGTGCCATTACAGATGATAGAGTTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAACTCTGGAATTTTCTGGAGATTGTTAATTGGATCATTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGAAAAGCTGCTGCTAAGAGCGGAAACAAAGCTCTAGTAACTGCGTTCGGTGCAATGAGAATGATTGTAACTGTA LITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGATCATTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCTGCTAAG------AGC---GGAAACAAAGCTCTA---GTA---ACT---GCG---TTC---GGT---GCAATG---AGAATGATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-a]_KJ926446 [IV-Alpha8-a] PRGD_OTU001e_otuREP_ff84442ec9097410402c1f366b539c43 gb|KJ926446| PRGD_OTU001e_otuREP_ff84442ec9097410402c1f366b539c43, putative proteorhodopsin gene, partial cds. PRGD_OTU001e_otuREP_ff84442ec9097410402c1f366b539c43, putative proteorhodopsin gene, partial cds. KJ926446 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/A subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) TTAATTACTGTTCCATTACAGATGATAGAGTTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAATTCTGGAATTTTCTGGAGATTGTTAATCGGATCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTGTAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGCTGCTTCTAAGAGTGGAAACAAAGCGCTTGTGACTGCTTTCAGTGCAATGAGAATGATTGTAACTGTA LITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEIFSGEAGKAASKSGNKALVTAFSAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTTCCATTACAGATGATAGAGTTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAATTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATCGGATCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGCTGCTTCTAAG------AGT---GGAAACAAAGCGCTT---GTG---ACT---GCT---TTC---AGT---GCAATG---AGAATGATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEI-----F--S-GEAGKAASK--S-GNKAL-V-T-A-F-S-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-a]_KJ926450 [IV-Alpha8-a] PRGD_OTU001e_8c6889412380053b52c1232d13434f25 gb|KJ926450| PRGD_OTU001e_8c6889412380053b52c1232d13434f25, putative proteorhodopsin gene, partial cds. PRGD_OTU001e_8c6889412380053b52c1232d13434f25, putative proteorhodopsin gene, partial cds. KJ926450 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/A subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGTAGCTGTAAGAAAAGCAAGTTCCGGAATATTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGAGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGAAAAGCTGCTGCTAAGAGTGGTAACAAAGCTCTAGTAACTGCGTTCAGTGCAATGAGAATGATTGTAACTGTA LITVPLQMIEFYLILVAVRKASSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAAAKSGNKALVTAFSAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCATTACAGATGATAGAGTTCTACTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAGTTCC---GGAATA------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGAGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGTAACAAAGCTCTA---GTA---ACT---GCG---TTC---AGT---GCAATG---AGAATGATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILVA---V-RKASS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-S-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-a]_KJ926453 [IV-Alpha8-a] PRGD_OTU001e_f9ac290ea6a73cbf5eb03e6837c4e9c8 gb|KJ926453| PRGD_OTU001e_f9ac290ea6a73cbf5eb03e6837c4e9c8, putative proteorhodopsin gene, partial cds. PRGD_OTU001e_f9ac290ea6a73cbf5eb03e6837c4e9c8, putative proteorhodopsin gene, partial cds. KJ926453 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/A subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATTACTGTACCATTACAGATGATAGAGTTTTACTTAATTCTAGTAGCTGTAAGAAAAGCAAGTTCTGGAATATTCTGGAGATTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAGGCTGCTGCTAAGAGCGGAAATAAAGCTCTAGTAACTGCGTTCAGTGCTATGAGAATGATTGTTACTGTA LITVPLQMIEFYLILVAVRKASSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAAAKSGNKALVTAFSAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTACCATTACAGATGATAGAGTTTTACTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAGTTCT---GGAATA------------------------------------TTCTGGAGA---TTGTTAATCGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAGGCTGCTGCTAAG------AGC---GGAAATAAAGCTCTA---GTA---ACT---GCG---TTC---AGT---GCTATG---AGAATGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILVA---V-RKASS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-S-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-a]_KJ926451 [IV-Alpha8-a] PRGD_OTU001e_aa7ca9bc5cba1358df963b38297b6a81 gb|KJ926451| PRGD_OTU001e_aa7ca9bc5cba1358df963b38297b6a81, putative proteorhodopsin gene, partial cds. PRGD_OTU001e_aa7ca9bc5cba1358df963b38297b6a81, putative proteorhodopsin gene, partial cds. KJ926451 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/A subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATTACTGTGCCATTACAGATGATAGAATTCTATTTAATTCTAGTAGCTGTAAGAAAAGCAAATTCTGGAATATTCTGGAGATTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATATTCTCAGGTGAAGCTGGAAAAGCTGCTGCTAAGAGTGGTAACAAAGCTCTAGTAACTGCGTTCAGTGCAATGAGAATGATTGTAACTGTA LITVPLQMIEFYLILVAVRKANSGIFWRLLIGSLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEIFSGEAGKAAAKSGNKALVTAFSAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTGCCATTACAGATGATAGAATTCTATTTAATTCTAGTAGCT---------GTA---AGAAAAGCAAATTCT---GGAATA------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAGTAATGTTAATCGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGAAAAGCTGCTGCTAAG------AGT---GGTAACAAAGCTCTA---GTA---ACT---GCG---TTC---AGT---GCAATG---AGAATGATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILVA---V-RKANS-GI------------FWR-LLIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEI-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-S-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-a]_KJ926447 [IV-Alpha8-a] PRGD_OTU001e_58d30b9bc4175104b084cd7556f07839 gb|KJ926447| PRGD_OTU001e_58d30b9bc4175104b084cd7556f07839, putative proteorhodopsin gene, partial cds. PRGD_OTU001e_58d30b9bc4175104b084cd7556f07839, putative proteorhodopsin gene, partial cds. KJ926447 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/A subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419) TTAATTACAGTTCCACTACAGATGATTGAATTCTACTTAATTCTAGTCGCTGTAAGAAAAGCAAGCTCTGGAATTTTCTGGAGATTGTTAATTGGAACACTTGTAATGTTAATCGGAGGATACTTAGGAGAAGCTGGATACATTAACGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGATCTACATTCTTTATGAAATATTCTCAGGTGAAGCTGGTAAAGTTGCTGCTAAGAGTGGAAACAAAGCTCTAGTAACTGCATTTGGTGCAATGAGAATGATTGTAACTGTA LITVPLQMIEFYLILVAVRKASSGIFWRLLIGTLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEIFSGEAGKVAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCACTACAGATGATTGAATTCTACTTAATTCTAGTCGCT---------GTA---AGAAAAGCAAGCTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGAACACTTGTAATGTTAATCGGAGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGATCTACATTCTTTATGAAATA---------------TTC------TCA---GGTGAAGCTGGTAAAGTTGCTGCTAAG------AGT---GGAAACAAAGCTCTA---GTA---ACT---GCA---TTT---GGT---GCAATG---AGAATGATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILVA---V-RKASS-GI------------FWR-LLIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--S-GEAGKVAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926543 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_cf08bcea6895b11cefa7456f2009518a gb|KJ926543| PRGD_OTU001f_cf08bcea6895b11cefa7456f2009518a, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_cf08bcea6895b11cefa7456f2009518a, putative proteorhodopsin gene, partial cds. KJ926543 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTGCCATTATTGATGTTAGAATTCTACTTTGTTCTAGCAGCAGTAAACAAATCAGACTCTGGAATTTTCTGGAGACTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAGGTATTCTCTGGTGAAGCAGGTAAGAGAGCGGCGAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCTATGAGAATGATCGTTACAGTA LITVPLLMLEFYFVLAAVNKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTACTTTGTTCTAGCAGCA---------GTA---AACAAATCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAGGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCGGCGAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCTATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926561 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_f8914ddd375c92c8e107ee9c55d42400 gb|KJ926561| PRGD_OTU001f_f8914ddd375c92c8e107ee9c55d42400, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_f8914ddd375c92c8e107ee9c55d42400, putative proteorhodopsin gene, partial cds. KJ926561 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTAATTACAGTGCCATTATTGATGCTAGAATTCTATTTTGTTTTAGCAGCAGTAAACAAATCAGACTCTGGAATTTTCTGGAGATTGATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTA LITVPLLMLEFYFVLAAVNKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTGCCATTATTGATGCTAGAATTCTATTTTGTTTTAGCAGCA---------GTA---AACAAATCAGACTCT---GGAATT------------------------------------TTCTGGAGA---TTGATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926459 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_0a5f7d9ed51073e59504857019ca6f18 gb|KJ926459| PRGD_OTU001f_0a5f7d9ed51073e59504857019ca6f18, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_0a5f7d9ed51073e59504857019ca6f18, putative proteorhodopsin gene, partial cds. KJ926459 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTTCCGTTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCAGTAAACAAAGCAGACTCAGGAATTTTCTGGAGACTGATGATCGGAACATTAGTAATGTTAATTGGTGGATACTTAGGAGAGGCTGGATACATCAACGCTACACTTGGTTTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAAAAGCTGCTAAGAGTGGAAACAAGTCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLAAVNKADSGIFWRLMIGTLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEVFSGEAGKKAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCGTTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCA---------GTA---AACAAAGCAGACTCA---GGAATT------------------------------------TTCTGGAGA---CTGATGATCGGAACATTAGTAATGTTAATTGGTGGATACTTAGGAGAG---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAAAAGCTGCTAAG------AGT---GGAAACAAGTCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEV-----F--S-GEAGKKAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926533 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_b7f1abcc9fc90a84616d16b553742048 gb|KJ926533| PRGD_OTU001f_b7f1abcc9fc90a84616d16b553742048, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_b7f1abcc9fc90a84616d16b553742048, putative proteorhodopsin gene, partial cds. KJ926533 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACTGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCAGTAAACAAAGCAGACTCAGGAATTTTCTGGAGACTGATGATTGGAACATTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGCAAAAAAGCTGCTAAGAGTGGGAACAAGTCGCTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTAACAGTA LITVPLLMLEFYFVLAAVNKADSGIFWRLMIGTLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKKAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCA---------GTA---AACAAAGCAGACTCA---GGAATT------------------------------------TTCTGGAGA---CTGATGATTGGAACATTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGCAAAAAAGCTGCTAAG------AGT---GGGAACAAGTCGCTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTAACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKKAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926473 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_312a0ccfd3c34fba3989af63422dd090 gb|KJ926473| PRGD_OTU001f_312a0ccfd3c34fba3989af63422dd090, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_312a0ccfd3c34fba3989af63422dd090, putative proteorhodopsin gene, partial cds. KJ926473 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) TTAATTACAGTTCCGTTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGACTGATGATTGGAACATTAGTAATGTTAATTGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAAAAGCTGCTAAGAGTGGAAACAAATCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLAAVNKADSGIFWRLMIGTLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEVFSGEAGKKAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCGTTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---CTGATGATTGGAACATTAGTAATGTTAATTGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAAAAGCTGCTAAG------AGT---GGAAACAAATCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEV-----F--S-GEAGKKAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926467 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_2932c1bfdfc8f9f272e6db0288fd098d gb|KJ926467| PRGD_OTU001f_2932c1bfdfc8f9f272e6db0288fd098d, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_2932c1bfdfc8f9f272e6db0288fd098d, putative proteorhodopsin gene, partial cds. KJ926467 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -33.9602, -73.3769), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACAGTTCCGTTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCAGTAAATAAAGCAGACTCAGGAATTTTCTGGAGACTGATGATCGGAACACTAGTAATGTTAATTGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAAAAGCTGCTAAGAGTGGAAACAAATCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLAAVNKADSGIFWRLMIGTLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEVFSGEAGKKAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCGTTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCA---------GTA---AATAAAGCAGACTCA---GGAATT------------------------------------TTCTGGAGA---CTGATGATCGGAACACTAGTAATGTTAATTGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAAAAGCTGCTAAG------AGT---GGAAACAAATCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEV-----F--S-GEAGKKAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926498 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_6d7f390a19b813cb141bbb7beb156e1b gb|KJ926498| PRGD_OTU001f_6d7f390a19b813cb141bbb7beb156e1b, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_6d7f390a19b813cb141bbb7beb156e1b, putative proteorhodopsin gene, partial cds. KJ926498 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) TTAATTACAGTTCCGTTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCAGTAAACAAAGCAGACTCAGGAATTTTCTGGAGACTGATGATCGGAACATTAGTAATGTTAATTGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAAAAGCTGCTAAGAGTGGAAACAAATCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLAAVNKADSGIFWRLMIGTLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEVFSGEAGKKAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCGTTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCA---------GTA---AACAAAGCAGACTCA---GGAATT------------------------------------TTCTGGAGA---CTGATGATCGGAACATTAGTAATGTTAATTGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAAAAGCTGCTAAG------AGT---GGAAACAAATCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEV-----F--S-GEAGKKAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926460 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_0a99e1fd9c1e47926413529342cb573b gb|KJ926460| PRGD_OTU001f_0a99e1fd9c1e47926413529342cb573b, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_0a99e1fd9c1e47926413529342cb573b, putative proteorhodopsin gene, partial cds. KJ926460 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTAATAACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCAGTAAACAAAGCAGACTCTGGAATTTTCTGGAGATTAATGCTTGGAACATTAGTTATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTATAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAAAAGCTGCTAAGAGTGGAAACAAATCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLAAVNKADSGIFWRLMLGTLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKKAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCA---------GTA---AACAAAGCAGACTCT---GGAATT------------------------------------TTCTGGAGA---TTAATGCTTGGAACATTAGTTATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTATAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAAAAGCTGCTAAG------AGT---GGAAACAAATCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LMLGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKKAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926534 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_b8a74991ad5eb3018e5ca8c73b1619cf gb|KJ926534| PRGD_OTU001f_b8a74991ad5eb3018e5ca8c73b1619cf, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_b8a74991ad5eb3018e5ca8c73b1619cf, putative proteorhodopsin gene, partial cds. KJ926534 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATTACAGTTCCATTACTAATGTTAGAATTCTTTTTTGTTCTAGCTGCAGTAAATAAAGCAAGCTCTGGAATTTTCTGGAGATTGATGATTGGAACATTAGTAATGTTAGTCGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTATAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAAAAGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACTGTA LITVPLLMLEFFFVLAAVNKASSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKKAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACAGTTCCATTACTAATGTTAGAATTCTTTTTTGTTCTAGCTGCA---------GTA---AATAAAGCAAGCTCT---GGAATT------------------------------------TTCTGGAGA---TTGATGATTGGAACATTAGTAATGTTAGTCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTATAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAAAAGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFFFVLAA---V-NKASS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKKAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926554 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_e744732fcaefe5fa3daed404fa101dd8 gb|KJ926554| PRGD_OTU001f_e744732fcaefe5fa3daed404fa101dd8, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_e744732fcaefe5fa3daed404fa101dd8, putative proteorhodopsin gene, partial cds. KJ926554 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTTGCAGCAGTAAACAAAGCAGACTCTGGAATTTTCTGGAGATTGTTAATTGGTTCATTAATAATGTTAATTGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACGCTTGGTTTTATAATCGGTATGGCTGGTTGGGTATACATCCTTTATGAAGTATTCTCAGGTGAAGCAGGCAAAAAAGCTGCTAAGAGTGGAAACAAGTCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLAAVNKADSGIFWRLLIGSLIMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKKAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---AACAAAGCAGACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTAATTGGTTCATTAATAATGTTAATTGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACGCTTGGT---TTTATAATCGGTATGGCTGGTTGGGTATACATCCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGCAAAAAAGCTGCTAAG------AGT---GGAAACAAGTCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LLIGSLIMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKKAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926491 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_5ed074c3d107524088d92b9215a827ae gb|KJ926491| PRGD_OTU001f_5ed074c3d107524088d92b9215a827ae, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_5ed074c3d107524088d92b9215a827ae, putative proteorhodopsin gene, partial cds. KJ926491 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAATTACAGTTCCATTACTAATGTTAGAATTCTACTTTGTTCTAGCTGCAGTAAACAAAGCAGACTCAGGAATATTCTGGAGACTGATGATCGGAACATTAGTAATGCTAATCGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAAAAGCTGCTAAGAGTGGAAACAAATCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLAAVNKADSGIFWRLMIGTLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEVFSGEAGKKAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTACTAATGTTAGAATTCTACTTTGTTCTAGCTGCA---------GTA---AACAAAGCAGACTCA---GGAATA------------------------------------TTCTGGAGA---CTGATGATCGGAACATTAGTAATGCTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAAAAGCTGCTAAG------AGT---GGAAACAAATCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEV-----F--S-GEAGKKAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926476 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_39d6b2d37ae63027f7c247c96b727040 gb|KJ926476| PRGD_OTU001f_39d6b2d37ae63027f7c247c96b727040, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_39d6b2d37ae63027f7c247c96b727040, putative proteorhodopsin gene, partial cds. KJ926476 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -33.28, 45.35) TTAATTACAGTTCCATTACTAATGTTAGAATTCTACTTTGTTCTAGCAGCAGTAAACAAAGCAGACTCTGGAATATTCTGGAGACTGATGATTGGAACATTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAAAAGCTGCTAAGAGTGGAAACAAATCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLAAVNKADSGIFWRLMIGTLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEVFSGEAGKKAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTACTAATGTTAGAATTCTACTTTGTTCTAGCAGCA---------GTA---AACAAAGCAGACTCT---GGAATA------------------------------------TTCTGGAGA---CTGATGATTGGAACATTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAAAAGCTGCTAAG------AGT---GGAAACAAATCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEV-----F--S-GEAGKKAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926456 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_086074e2dacffc51c1624e7c3de6d5bd gb|KJ926456| PRGD_OTU001f_086074e2dacffc51c1624e7c3de6d5bd, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_086074e2dacffc51c1624e7c3de6d5bd, putative proteorhodopsin gene, partial cds. KJ926456 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCAGCAGTAAACAAAGCAGACTCTGGAATCTTCTGGAGACTGATGATCGGAACATTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATCAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAAAAGCTGCTAAGAGCGGAAACAAAGCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACAGTA LITVPLLMLEFYFVLAAVNKADSGIFWRLMIGTLVMLIGGYLGEAGYINATLGFVIGMAGWIYILYEVFSGEAGKKAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCAGCA---------GTA---AACAAAGCAGACTCT---GGAATC------------------------------------TTCTGGAGA---CTGATGATCGGAACATTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAAAAGCTGCTAAG------AGC---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEV-----F--S-GEAGKKAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926521 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_978c510b27ab7f9081bc90a4ac1570b3 gb|KJ926521| PRGD_OTU001f_978c510b27ab7f9081bc90a4ac1570b3, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_978c510b27ab7f9081bc90a4ac1570b3, putative proteorhodopsin gene, partial cds. KJ926521 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACAGTTCCATTACTAATGCTAGAATTCTATTTTGTTCTTTCAGCAGTAAACAAAGCAGACTCTGGAATTTTCTGGAGACTGATGATTGGAACATTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATATATCAACGCTACACTTGGTTTTGTTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAAAAGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACAGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMIGTLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEVFSGEAGKKAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTACTAATGCTAGAATTCTATTTTGTTCTTTCAGCA---------GTA---AACAAAGCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTGATGATTGGAACATTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTTATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAAAAGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEV-----F--S-GEAGKKAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926501 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_70a8c45961b180db763dcdd75fddac5c gb|KJ926501| PRGD_OTU001f_70a8c45961b180db763dcdd75fddac5c, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_70a8c45961b180db763dcdd75fddac5c, putative proteorhodopsin gene, partial cds. KJ926501 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCGGCAGTAAACAAAGCAGACTCTGGAATATTCTGGAGACTGATGATTGGTACTTTAGTAATGCTAGTAGGTGGATACTTAGGAGAGGCTGGATACATCAACGCTACACTTGGTTTTGTTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAAAAGCTGCTAAGAGTGGAAACAAGGCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLAAVNKADSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFVIGMAGWVYILYEVFSGEAGKKAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCGGCA---------GTA---AACAAAGCAGACTCT---GGAATA------------------------------------TTCTGGAGA---CTGATGATTGGTACTTTAGTAATGCTAGTAGGTGGATACTTAGGAGAG---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAAAAGCTGCTAAG------AGT---GGAAACAAGGCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEV-----F--S-GEAGKKAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926550 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_df4eedcb2c811079e0dab00b07efffa9 gb|KJ926550| PRGD_OTU001f_df4eedcb2c811079e0dab00b07efffa9, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_df4eedcb2c811079e0dab00b07efffa9, putative proteorhodopsin gene, partial cds. KJ926550 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCGGCAGTAAACAAAGCAGACTCTGGAATATTCTGGAGACTGATGATTGGTACTTTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAAAAGCTGCTAAGAGTGGAAACAAGGCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACAGTA LITVPLLMLEFYFVLAAVNKADSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKKAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCGGCA---------GTA---AACAAAGCAGACTCT---GGAATA------------------------------------TTCTGGAGA---CTGATGATTGGTACTTTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCAGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAAAAGCTGCTAAG------AGT---GGAAACAAGGCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKKAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926468 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_2994c3081b958d346f357e1dab63cc58 gb|KJ926468| PRGD_OTU001f_2994c3081b958d346f357e1dab63cc58, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_2994c3081b958d346f357e1dab63cc58, putative proteorhodopsin gene, partial cds. KJ926468 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACAGTACCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGTATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAATGCTACGCTTGGTTTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAATAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTACCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGTATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACGCTTGGT---TTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAATAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926475 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_36cdfce9c515d40d5d452d9b22da8a96 gb|KJ926475| PRGD_OTU001f_36cdfce9c515d40d5d452d9b22da8a96, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_36cdfce9c515d40d5d452d9b22da8a96, putative proteorhodopsin gene, partial cds. KJ926475 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAATGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGATCTACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAATAAAGCACTTGTAACTGCTTTTGGTGCGATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGATCTACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAATAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926477 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_423515b1800b23db438aef09cbd86f79 gb|KJ926477| PRGD_OTU001f_423515b1800b23db438aef09cbd86f79, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_423515b1800b23db438aef09cbd86f79, putative proteorhodopsin gene, partial cds. KJ926477 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTGGGTGGATACTTAGGAGAAGCAGGATACATCAATGCTACACTTGGTTTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCGAAGAGTGGTAATAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTGGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCGAAG------AGT---GGTAATAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926509 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_8315b7da8c22a89e413d04361349dca3 gb|KJ926509| PRGD_OTU001f_8315b7da8c22a89e413d04361349dca3, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_8315b7da8c22a89e413d04361349dca3, putative proteorhodopsin gene, partial cds. KJ926509 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAAGAGCAGCGAAAAGTGGTAATAAAGCACTTGTAACTGCATTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAAGAGCAGCGAAA------AGT---GGTAATAAAGCACTT---GTA---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926545 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_d1cb591b7f562385fd4b5ec41dadbbc0 gb|KJ926545| PRGD_OTU001f_d1cb591b7f562385fd4b5ec41dadbbc0, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_d1cb591b7f562385fd4b5ec41dadbbc0, putative proteorhodopsin gene, partial cds. KJ926545 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATTGGTATGGCTGGATGGATCTACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAATAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATTGGTATGGCTGGATGGATCTACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAATAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926558 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_ee811bd26eebd82aec672357a5d1b0e7 gb|KJ926558| PRGD_OTU001f_ee811bd26eebd82aec672357a5d1b0e7, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_ee811bd26eebd82aec672357a5d1b0e7, putative proteorhodopsin gene, partial cds. KJ926558 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATTAACGCTACACTTGGTTTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCGGCGAAGAGTGGTAATAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCGGCGAAG------AGT---GGTAATAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926553 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_e6d2dd9f7f18438eadfc8892df671818 gb|KJ926553| PRGD_OTU001f_e6d2dd9f7f18438eadfc8892df671818, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_e6d2dd9f7f18438eadfc8892df671818, putative proteorhodopsin gene, partial cds. KJ926553 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATTAACGCTACACTTGGTTTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCTATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCTATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926472 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_2f233f2b06d88e9595fdf804ee956605 gb|KJ926472| PRGD_OTU001f_2f233f2b06d88e9595fdf804ee956605, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_2f233f2b06d88e9595fdf804ee956605, putative proteorhodopsin gene, partial cds. KJ926472 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACAATAGTTATGCTAGTTGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCGGCGAAGAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTIVMLVGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACAATAGTTATGCTAGTTGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCGGCGAAG------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTIVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926500 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_7036f2071f2c2720e31ad8a5153e2c3c gb|KJ926500| PRGD_OTU001f_7036f2071f2c2720e31ad8a5153e2c3c, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_7036f2071f2c2720e31ad8a5153e2c3c, putative proteorhodopsin gene, partial cds. KJ926500 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Pacific side (70.9139, -128.9264), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTTATGCTAGTTGGTGGATACTTAGGAGAGGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTTATGCTAGTTGGTGGATACTTAGGAGAG---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926542 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_ca9e02d7fbac3d642651173e18cd9fe3 gb|KJ926542| PRGD_OTU001f_ca9e02d7fbac3d642651173e18cd9fe3, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_ca9e02d7fbac3d642651173e18cd9fe3, putative proteorhodopsin gene, partial cds. KJ926542 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683) TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACACTAGTTATGCTAGTTGGTGGATACTTAGGAGAAGCAGGATACATTAACGCTACACTTGGTTTCATTATTGGTATGGCTGGATGGATCTATATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGCGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACACTAGTTATGCTAGTTGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATTGGTATGGCTGGATGGATCTATATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGC---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926512 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_8524d478fc503c10d9f8b7aa42be54b1 gb|KJ926512| PRGD_OTU001f_8524d478fc503c10d9f8b7aa42be54b1, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_8524d478fc503c10d9f8b7aa42be54b1, putative proteorhodopsin gene, partial cds. KJ926512 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTGCCATTATTGATGTTAGAGTTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTAATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATTAACGCTACACTTGGTTTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCTAAGAGTGGTAACAAATCACTTGTAACTGCTTTTGGAGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTATTGATGTTAGAGTTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTAATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCTAAG------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGA---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926524 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_9a6aa234946454d3dc75b6df6b43b57c gb|KJ926524| PRGD_OTU001f_9a6aa234946454d3dc75b6df6b43b57c, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_9a6aa234946454d3dc75b6df6b43b57c, putative proteorhodopsin gene, partial cds. KJ926524 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683) TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTAATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATTAACGCTACACTTGGTTTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAATAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTAATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAATAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926525 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_9e42a22ba514c253567ac846b62c3d1a gb|KJ926525| PRGD_OTU001f_9e42a22ba514c253567ac846b62c3d1a, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_9e42a22ba514c253567ac846b62c3d1a, putative proteorhodopsin gene, partial cds. KJ926525 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTTCCATTGTTGATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTAATGCTTGGTACAATTGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATTAACGCTACACTTGGTTTTATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTATTCTCTGGCGAAGCAGGTAAGAGAGCAGCGAAAAGTGGGAATAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTIVMLVGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTGTTGATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTAATGCTTGGTACAATTGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTA---------------TTC------TCT---GGCGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGGAATAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTIVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926511 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_83bcbea8624971a228222e98a32f8e71 gb|KJ926511| PRGD_OTU001f_83bcbea8624971a228222e98a32f8e71, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_83bcbea8624971a228222e98a32f8e71, putative proteorhodopsin gene, partial cds. KJ926511 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683) TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATATTCTGGAGATTGATGCTTGGTACTCTTGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATTAACGCTACACTTGGTTTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATA------------------------------------TTCTGGAGA---TTGATGCTTGGTACTCTTGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926526 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_a01266ef0bf46b0abdecf921cd1432ab gb|KJ926526| PRGD_OTU001f_a01266ef0bf46b0abdecf921cd1432ab, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_a01266ef0bf46b0abdecf921cd1432ab, putative proteorhodopsin gene, partial cds. KJ926526 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; ; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTAATGCTTGGTACATTAGTAATGCTTATAGGTGGATACCTAGGAGAAGCAGGTTACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLIGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTAATGCTTGGTACATTAGTAATGCTTATAGGTGGATACCTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926562 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_faf3ddc0314c74c31e24880ef857b9d2 gb|KJ926562| PRGD_OTU001f_faf3ddc0314c74c31e24880ef857b9d2, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_faf3ddc0314c74c31e24880ef857b9d2, putative proteorhodopsin gene, partial cds. KJ926562 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGACTGATGTTAGGTACAATAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTIVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---CTGATGTTAGGTACAATAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTIVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926506 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_75c4d46a4532a3fb883b0bc90ca0b21f gb|KJ926506| PRGD_OTU001f_75c4d46a4532a3fb883b0bc90ca0b21f, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_75c4d46a4532a3fb883b0bc90ca0b21f, putative proteorhodopsin gene, partial cds. KJ926506 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683) TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTTATGCTAGTTGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCGGCGAAGAGTGGCAATAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTTATGCTAGTTGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCGGCGAAG------AGT---GGCAATAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926538 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_c6a58952c18f4b9d923f636b415acfbf gb|KJ926538| PRGD_OTU001f_c6a58952c18f4b9d923f636b415acfbf, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_c6a58952c18f4b9d923f636b415acfbf, putative proteorhodopsin gene, partial cds. KJ926538 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683) TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTTATGCTAGTTGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTTGTTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCGGCGAAGAGTGGCAATAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFVIGMAGWIYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTTATGCTAGTTGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCGGCGAAG------AGT---GGCAATAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926458 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_0a5a19d9a60670c3bab21ff55493e177 gb|KJ926458| PRGD_OTU001f_0a5a19d9a60670c3bab21ff55493e177, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_0a5a19d9a60670c3bab21ff55493e177, putative proteorhodopsin gene, partial cds. KJ926458 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Mediterranean Sea (33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACACTAGTTATGCTAGTTGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCGGCGAAGAGTGGTAATAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACACTAGTTATGCTAGTTGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCGGCGAAG------AGT---GGTAATAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926462 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_11c27deb8758fc36a800d9cceb3b5c82 gb|KJ926462| PRGD_OTU001f_11c27deb8758fc36a800d9cceb3b5c82, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_11c27deb8758fc36a800d9cceb3b5c82, putative proteorhodopsin gene, partial cds. KJ926462 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTGATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACACTAGTTATGCTAGTTGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGATCTACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCGGCGAAGAGTGGTAATAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACACTAGTTATGCTAGTTGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGATCTACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCGGCGAAG------AGT---GGTAATAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926464 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_17ef90e9d2072a9c704042b49336d891 gb|KJ926464| PRGD_OTU001f_17ef90e9d2072a9c704042b49336d891, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_17ef90e9d2072a9c704042b49336d891, putative proteorhodopsin gene, partial cds. KJ926464 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTTATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAATAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTTATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAATAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926519 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_91ae05e83ea373e131bd32adec3e4538 gb|KJ926519| PRGD_OTU001f_91ae05e83ea373e131bd32adec3e4538, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_91ae05e83ea373e131bd32adec3e4538, putative proteorhodopsin gene, partial cds. KJ926519 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACACTAGTTATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGATGGATTTACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCGGCAAAGAGTGGTAATAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACACTAGTTATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGATGGATTTACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCGGCAAAG------AGT---GGTAATAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926504 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_72b66576b8f4b1c49231310ca6ffc6cd gb|KJ926504| PRGD_OTU001f_72b66576b8f4b1c49231310ca6ffc6cd, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_72b66576b8f4b1c49231310ca6ffc6cd, putative proteorhodopsin gene, partial cds. KJ926504 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACACTAGTTATGCTAGTTGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCGGCGAAGAGTGGTAATAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACACTAGTTATGCTAGTTGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCGGCGAAG------AGT---GGTAATAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926502 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_7190b0f7dedaba9b8426d3c2c2a16bd1 gb|KJ926502| PRGD_OTU001f_7190b0f7dedaba9b8426d3c2c2a16bd1, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_7190b0f7dedaba9b8426d3c2c2a16bd1, putative proteorhodopsin gene, partial cds. KJ926502 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACACTAGTTATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAATAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACACTAGTTATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAATAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926488 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_5cffdbfbb75d3f7ca8798fad4a210ee6 gb|KJ926488| PRGD_OTU001f_5cffdbfbb75d3f7ca8798fad4a210ee6, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_5cffdbfbb75d3f7ca8798fad4a210ee6, putative proteorhodopsin gene, partial cds. KJ926488 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175) TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACACTAGTTATGCTAGTTGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACGCTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACACTAGTTATGCTAGTTGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACGCTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926507 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_7abbf48a2a46439ca9894c8b0351d898 gb|KJ926507| PRGD_OTU001f_7abbf48a2a46439ca9894c8b0351d898, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_7abbf48a2a46439ca9894c8b0351d898, putative proteorhodopsin gene, partial cds. KJ926507 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACACTTGTAATGCTATTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATCCTTTATGAAGTATTTTCTGGTGAAGCAGGTAAGAGAGCAGCTAAGAGTGGTAATAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLLGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACACTTGTAATGCTATTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATCCTTTATGAAGTA---------------TTT------TCT---GGTGAAGCAGGTAAGAGAGCAGCTAAG------AGT---GGTAATAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLLGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926540 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_c7b99e8f85eba8c7fa29dca99859999f gb|KJ926540| PRGD_OTU001f_c7b99e8f85eba8c7fa29dca99859999f, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_c7b99e8f85eba8c7fa29dca99859999f, putative proteorhodopsin gene, partial cds. KJ926540 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683) TTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACACTTGTAATGCTAGTAGGTGGATACTTAGGAGAATCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCTAAGAGTGGTAATAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGESGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACACTTGTAATGCTAGTAGGTGGATACTTAGGAGAA---------TCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCTAAG------AGT---GGTAATAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---S------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926522 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_989ce9b860610e4e23f53affc368bba2 gb|KJ926522| PRGD_OTU001f_989ce9b860610e4e23f53affc368bba2, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_989ce9b860610e4e23f53affc368bba2, putative proteorhodopsin gene, partial cds. KJ926522 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCAGTAAACAAAGCGGATTCAGGAATTTTCTGGAGATTAATGCTTGGTACACTTGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCCACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAGAGTGGTAATAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCA---------GTA---AACAAAGCGGATTCA---GGAATT------------------------------------TTCTGGAGA---TTAATGCTTGGTACACTTGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCC------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAG------AGT---GGTAATAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926484 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_5638efed5814f49bed073ecdf3c7a20b gb|KJ926484| PRGD_OTU001f_5638efed5814f49bed073ecdf3c7a20b, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_5638efed5814f49bed073ecdf3c7a20b, putative proteorhodopsin gene, partial cds. KJ926484 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; ; 67.49, -168.12), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) TTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACACTTGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAGAGTGGTAATAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACACTTGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAG------AGT---GGTAATAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926520 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_93730818b360f708f42479f10c51602f gb|KJ926520| PRGD_OTU001f_93730818b360f708f42479f10c51602f, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_93730818b360f708f42479f10c51602f, putative proteorhodopsin gene, partial cds. KJ926520 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACACTTGTAATGTTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAATAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACACTTGTAATGTTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAATAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926537 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_bfaa54fd6b7c89589b98f810b3c28f3c gb|KJ926537| PRGD_OTU001f_bfaa54fd6b7c89589b98f810b3c28f3c, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_bfaa54fd6b7c89589b98f810b3c28f3c, putative proteorhodopsin gene, partial cds. KJ926537 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACACTTGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATATATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAATAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACACTTGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATATATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAATAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926455 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_01302d29118bfe5a1d241d2717432d8b gb|KJ926455| PRGD_OTU001f_01302d29118bfe5a1d241d2717432d8b, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_01302d29118bfe5a1d241d2717432d8b, putative proteorhodopsin gene, partial cds. KJ926455 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTAATGCTTGGTACACTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAATAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTAATGCTTGGTACACTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAATAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926544 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_d02879aa840a6932a24b258c5b86281a gb|KJ926544| PRGD_OTU001f_d02879aa840a6932a24b258c5b86281a, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_d02879aa840a6932a24b258c5b86281a, putative proteorhodopsin gene, partial cds. KJ926544 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACAGTACCACTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCAGTAAACAAAGCAAATTCAGGAATTTTCTGGAGATTAATGCTTGGTACACTAGTAATGTTAGTGGGTGGATATTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACTGTA LITVPLLMLEFYFVLSAVNKANSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTACCACTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCA---------GTA---AACAAAGCAAATTCA---GGAATT------------------------------------TTCTGGAGA---TTAATGCTTGGTACACTAGTAATGTTAGTGGGTGGATATTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKANS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926563 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_fafd4f9c79295e6a6692780aa4e5c335 gb|KJ926563| PRGD_OTU001f_fafd4f9c79295e6a6692780aa4e5c335, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_fafd4f9c79295e6a6692780aa4e5c335, putative proteorhodopsin gene, partial cds. KJ926563 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACAGTACCATTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCAGTAAACAAAGCAGACTCAGGAATTTTCTGGAGATTGATGCTTGGTACAATAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTIVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTACCATTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCA---------GTA---AACAAAGCAGACTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACAATAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTIVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926535 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_b939e63af28c76c0485d831b56809df3 gb|KJ926535| PRGD_OTU001f_b939e63af28c76c0485d831b56809df3, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_b939e63af28c76c0485d831b56809df3, putative proteorhodopsin gene, partial cds. KJ926535 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACAGTACCATTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACAATAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAATAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTIVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTACCATTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACAATAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAATAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTIVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926547 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_d4f2a23805b27d8425301f122c0a7d55 gb|KJ926547| PRGD_OTU001f_d4f2a23805b27d8425301f122c0a7d55, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_d4f2a23805b27d8425301f122c0a7d55, putative proteorhodopsin gene, partial cds. KJ926547 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACAGTGCCACTACTTATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATATATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCTAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCACTACTTATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCTAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926548 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_d65f27cc1008e7b210020bb8204b0e03 gb|KJ926548| PRGD_OTU001f_d65f27cc1008e7b210020bb8204b0e03, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_d65f27cc1008e7b210020bb8204b0e03, putative proteorhodopsin gene, partial cds. KJ926548 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683) TTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTAGCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACAATAGTAATGCTAGTTGGTGGATACTTAGGAGAAGCAGGATATATCAACGCTACACTTGGTTTCATTATCGGTATAGCTGGTTGGATATACATTCTTTATGAAGTATTTTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAATAAAGCACTTGTAACTGCTTTCGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLAAVNKADSGIFWRLMLGTIVMLVGGYLGEAGYINATLGFIIGIAGWIYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTAGCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACAATAGTAATGCTAGTTGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATAGCTGGTTGGATATACATTCTTTATGAAGTA---------------TTT------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAATAAAGCACTT---GTA---ACT---GCT---TTC---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LMLGTIVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGIAGWIYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926551 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_df91522c8e9f8ca230665271aec42d8a gb|KJ926551| PRGD_OTU001f_df91522c8e9f8ca230665271aec42d8a, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_df91522c8e9f8ca230665271aec42d8a, putative proteorhodopsin gene, partial cds. KJ926551 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTAATGCTTGGTACATTAGTGATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATTGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAATAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTAATGCTTGGTACATTAGTGATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATTGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAATAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926495 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_65e96752b0d11789f49bec37d0f5c902 gb|KJ926495| PRGD_OTU001f_65e96752b0d11789f49bec37d0f5c902, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_65e96752b0d11789f49bec37d0f5c902, putative proteorhodopsin gene, partial cds. KJ926495 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAATTACAGTACCTTTACTAATGCTTGAGTTCTACTTTGTATTAGCAGCAGTAAACAAATCAGATTCAGGAATTTTCTGGAGACTGATGATTGGTACATTAGTAATGCTTGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTATTCTCTGGTGAAGCAGGTAAAAGAGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLAAVNKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTACCTTTACTAATGCTTGAGTTCTACTTTGTATTAGCAGCA---------GTA---AACAAATCAGATTCA---GGAATT------------------------------------TTCTGGAGA---CTGATGATTGGTACATTAGTAATGCTTGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAAAGAGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926559 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_eecd61391737f0bebc3d5964df0e7fc8 gb|KJ926559| PRGD_OTU001f_eecd61391737f0bebc3d5964df0e7fc8, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_eecd61391737f0bebc3d5964df0e7fc8, putative proteorhodopsin gene, partial cds. KJ926559 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTACCTTTATTGATGCTTGAGTTCTACTTTGTATTATCAGCAGTAAATAAAGCAGATTCAGGAATTTTCTGGAGACTGATGATTGGTACAATAGTAATGCTTGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTATTCTCTGGTGAAGCAGGTAAAAGAGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMIGTIVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTACCTTTATTGATGCTTGAGTTCTACTTTGTATTATCAGCA---------GTA---AATAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---CTGATGATTGGTACAATAGTAATGCTTGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAAAGAGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMIGTIVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926508 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_7d6bbd8a398e5317463d63044ffa182b gb|KJ926508| PRGD_OTU001f_7d6bbd8a398e5317463d63044ffa182b, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_7d6bbd8a398e5317463d63044ffa182b, putative proteorhodopsin gene, partial cds. KJ926508 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTACCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATCTTCTGGAGACTAATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCGGCGAAAAGTGGTAATAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTACCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATC------------------------------------TTCTGGAGA---CTAATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCGGCGAAA------AGT---GGTAATAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926531 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_aac2df8688c9be7987faccd911bf0b6b gb|KJ926531| PRGD_OTU001f_aac2df8688c9be7987faccd911bf0b6b, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_aac2df8688c9be7987faccd911bf0b6b, putative proteorhodopsin gene, partial cds. KJ926531 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683) TTAATTACAGTTCCACTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGCTACTTGGATCAATTGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATAAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTCTACATTCTTTATGAAGTATTTTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATAGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLLLGSIVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCACTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGCTACTTGGATCAATTGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATA------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTCTACATTCTTTATGAAGTA---------------TTT------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATAGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LLLGSIVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926552 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_e225bc302ff0cf9e64fc1478f3e6cac5 gb|KJ926552| PRGD_OTU001f_e225bc302ff0cf9e64fc1478f3e6cac5, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_e225bc302ff0cf9e64fc1478f3e6cac5, putative proteorhodopsin gene, partial cds. KJ926552 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTGCCATTACTAATGCTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGCTACTTGGATCAATTGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLLLGSIVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTACTAATGCTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGCTACTTGGATCAATTGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LLLGSIVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926497 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_6c7976106c9d04c847e82f8a853f9899 gb|KJ926497| PRGD_OTU001f_6c7976106c9d04c847e82f8a853f9899, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_6c7976106c9d04c847e82f8a853f9899, putative proteorhodopsin gene, partial cds. KJ926497 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTACCGTTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTACCGTTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926528 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_a58834d0fef67aa2ab6fb1adb8c02628 gb|KJ926528| PRGD_OTU001f_a58834d0fef67aa2ab6fb1adb8c02628, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_a58834d0fef67aa2ab6fb1adb8c02628, putative proteorhodopsin gene, partial cds. KJ926528 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419) TTAATTACAGTACCGTTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTACCGTTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926482 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_48c1ee961ff5c48bbf9e3c6dd5acc9b0 gb|KJ926482| PRGD_OTU001f_48c1ee961ff5c48bbf9e3c6dd5acc9b0, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_48c1ee961ff5c48bbf9e3c6dd5acc9b0, putative proteorhodopsin gene, partial cds. KJ926482 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683) TTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGTTATACATCTTATATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCGGCTAAGAGTGGTAATAAATCGCTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWLYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGTTATACATCTTATATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCGGCTAAG------AGT---GGTAATAAATCGCTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWLYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926486 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_58429be204c2355761bcd4fe287a54c6 gb|KJ926486| PRGD_OTU001f_58429be204c2355761bcd4fe287a54c6, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_58429be204c2355761bcd4fe287a54c6, putative proteorhodopsin gene, partial cds. KJ926486 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) TTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCGGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCGGCTAAGAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCGATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCG---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCGGCTAAG------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926479 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_425e82a82c049ed7269f706a8833b774 gb|KJ926479| PRGD_OTU001f_425e82a82c049ed7269f706a8833b774, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_425e82a82c049ed7269f706a8833b774, putative proteorhodopsin gene, partial cds. KJ926479 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) TTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGTTATACATCTTATATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCGATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWLYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGTTATACATCTTATATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWLYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926510 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_836c22bf6568258673df96fd9bb35950 gb|KJ926510| PRGD_OTU001f_836c22bf6568258673df96fd9bb35950, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_836c22bf6568258673df96fd9bb35950, putative proteorhodopsin gene, partial cds. KJ926510 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCGGCGAAAAGTGGTAATAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCGGCGAAA------AGT---GGTAATAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926478 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_424132d17eaa64789981f3c15fa421e7 gb|KJ926478| PRGD_OTU001f_424132d17eaa64789981f3c15fa421e7, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_424132d17eaa64789981f3c15fa421e7, putative proteorhodopsin gene, partial cds. KJ926478 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) TTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACTTTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACTTTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926487 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_594bb592a0b262889ae96e3083729a02 gb|KJ926487| PRGD_OTU001f_594bb592a0b262889ae96e3083729a02, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_594bb592a0b262889ae96e3083729a02, putative proteorhodopsin gene, partial cds. KJ926487 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.935, 18.508) TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTTTGGAGATTGATGCTTGGTACTATAGTAATGCTACTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGAAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTIVMLLGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTTTGGAGA---TTGATGCTTGGTACTATAGTAATGCTACTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGAAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTIVMLLGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926560 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_f7d030228f832fa6006b219506bbbd0d gb|KJ926560| PRGD_OTU001f_f7d030228f832fa6006b219506bbbd0d, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_f7d030228f832fa6006b219506bbbd0d, putative proteorhodopsin gene, partial cds. KJ926560 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTAATGCTTGGTACATTAGTGATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCGGCGAAGAGTGGTAATAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTAATGCTTGGTACATTAGTGATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCGGCGAAG------AGT---GGTAATAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926483 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_50e4b2ba65618e61ba022dcbfb25f868 gb|KJ926483| PRGD_OTU001f_50e4b2ba65618e61ba022dcbfb25f868, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_50e4b2ba65618e61ba022dcbfb25f868, putative proteorhodopsin gene, partial cds. KJ926483 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTTGCTGCAGTAAACAAAGCAAATTCTGGAATTTTCTGGAGATTGTTACTTGGTTCTATAGTTATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACACTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAATAGATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLAAVNKANSGIFWRLLLGSIVMLVGGYLGEAGYINTTLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNRSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTTGCTGCA---------GTA---AACAAAGCAAATTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTACTTGGTTCTATAGTTATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAATAGATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LLLGSIVMLVGGYLGE---A------G--Y-----------I----------------------NT------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNRSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926499 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_6eebb1c2c25919d8feb5b4ef36f9222a gb|KJ926499| PRGD_OTU001f_6eebb1c2c25919d8feb5b4ef36f9222a, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_6eebb1c2c25919d8feb5b4ef36f9222a, putative proteorhodopsin gene, partial cds. KJ926499 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683) TTAATTACAGTACCATTACTAATGTTAGAATTCTACTTTGTTCTAGCTGCAGTAAATAAGGCAGATTCAGGAATTTTCTGGAGATTGCTAATTGGTTCAATCGTAATGCTAGGAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAGTCACTTGTAACTGCTTTTGGTGCAATGAGAATGATTGTTACTGTA LITVPLLMLEFYFVLAAVNKADSGIFWRLLIGSIVMLGGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTACCATTACTAATGTTAGAATTCTACTTTGTTCTAGCTGCA---------GTA---AATAAGGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGCTAATTGGTTCAATCGTAATGCTAGGAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAGTCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LLIGSIVMLGGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926536 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_baae94b7b0d3aa9db0d83895c253f5ef gb|KJ926536| PRGD_OTU001f_baae94b7b0d3aa9db0d83895c253f5ef, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_baae94b7b0d3aa9db0d83895c253f5ef, putative proteorhodopsin gene, partial cds. KJ926536 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419) TTAATTACAGTACCATTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCAGTAAATAAAGCAGATTCAGGAATTTTCTGGAGATTGCTAATTGGTTCAATCGTAATGCTAGGAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAATAAGTCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLAAVNKADSGIFWRLLIGSIVMLGGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTACCATTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCA---------GTA---AATAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGCTAATTGGTTCAATCGTAATGCTAGGAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAATAAGTCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LLIGSIVMLGGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926557 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_ee3337bdc0dc56a6f8b056a9a5aeb7c0 gb|KJ926557| PRGD_OTU001f_ee3337bdc0dc56a6f8b056a9a5aeb7c0, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_ee3337bdc0dc56a6f8b056a9a5aeb7c0, putative proteorhodopsin gene, partial cds. KJ926557 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683) TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCAGTAAACAAAGCAAACTCTGGAATTTTCTGGAGATTGATGATTGGAACATTAATAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGTTACATCAACGTCACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAAAGCAGCGAAAAGTGGTAATAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLAAVNKANSGIFWRLMIGTLIMLVGGYLGEAGYINVTLGFIIGMAGWVYILYEVFSGEAGKKAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCA---------GTA---AACAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGATGATTGGAACATTAATAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGTC------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAAAGCAGCGAAA------AGT---GGTAATAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LMIGTLIMLVGGYLGE---A------G--Y-----------I----------------------NV------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKKAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926485 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_57b8d2b9a023ff0db935e6f3f2faf01f gb|KJ926485| PRGD_OTU001f_57b8d2b9a023ff0db935e6f3f2faf01f, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_57b8d2b9a023ff0db935e6f3f2faf01f, putative proteorhodopsin gene, partial cds. KJ926485 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (73.9992, 19.2097), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAATCAGACTCTGGAATTTTCTGGAGACTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKSDSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTATTGATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAATCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKSDS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926481 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_436628b9180bf9b8e54a84a14a6c3165 gb|KJ926481| PRGD_OTU001f_436628b9180bf9b8e54a84a14a6c3165, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_436628b9180bf9b8e54a84a14a6c3165, putative proteorhodopsin gene, partial cds. KJ926481 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATTACAGTGCCATTACTAATGTTAGAGTTCTACTTTGTTCTAGCAGCAGTAAATAAAGCAAACTCTGGAATTTTCTGGAGACTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACCTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTA LITVPLLMLEFYFVLAAVNKANSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTACTAATGTTAGAGTTCTACTTTGTTCTAGCAGCA---------GTA---AATAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---CTAATGATTGGTACATTAGTAATGCTAGTAGGTGGATACCTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATCTTATATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926513 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_874e9dcab56bd1e29758f21314199a19 gb|KJ926513| PRGD_OTU001f_874e9dcab56bd1e29758f21314199a19, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_874e9dcab56bd1e29758f21314199a19, putative proteorhodopsin gene, partial cds. KJ926513 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) TTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926514 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_8c674cefb51fe4c5c347004ab2babb14 gb|KJ926514| PRGD_OTU001f_8c674cefb51fe4c5c347004ab2babb14, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_8c674cefb51fe4c5c347004ab2babb14, putative proteorhodopsin gene, partial cds. KJ926514 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAGAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAG------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926474 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_358d8d895e002a9229eefb84c14b2147 gb|KJ926474| PRGD_OTU001f_358d8d895e002a9229eefb84c14b2147, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_358d8d895e002a9229eefb84c14b2147, putative proteorhodopsin gene, partial cds. KJ926474 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATTAATGCTACACTTGGTTTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGAAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGAAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926541 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_c8557064d1f839816bd64cfcf5b5ef42 gb|KJ926541| PRGD_OTU001f_c8557064d1f839816bd64cfcf5b5ef42, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_c8557064d1f839816bd64cfcf5b5ef42, putative proteorhodopsin gene, partial cds. KJ926541 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45; -33.28, 45.35) TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926480 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_42e6459ab8bf34878c082f9ef3b52b57 gb|KJ926480| PRGD_OTU001f_42e6459ab8bf34878c082f9ef3b52b57, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_42e6459ab8bf34878c082f9ef3b52b57, putative proteorhodopsin gene, partial cds. KJ926480 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATTAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGATCTATATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGATCTATATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926454 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_otuREP_c3a1fd399f603e9da13560977e7f47be gb|KJ926454| PRGD_OTU001f_otuREP_c3a1fd399f603e9da13560977e7f47be, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_otuREP_c3a1fd399f603e9da13560977e7f47be, putative proteorhodopsin gene, partial cds. KJ926454 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926470 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_2f0160ec48d2a3699f8d4d78c091fa2c gb|KJ926470| PRGD_OTU001f_2f0160ec48d2a3699f8d4d78c091fa2c, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_2f0160ec48d2a3699f8d4d78c091fa2c, putative proteorhodopsin gene, partial cds. KJ926470 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -33.9602, -73.3769), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGTACACTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAGAGAGCAGCGAAAAGTGGTAACAAAGCACTTGTGACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKRAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTATCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACACTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAGAGAGCAGCGAAA------AGT---GGTAACAAAGCACTT---GTG---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926466 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_2255960bda9aa647b8c2f4601bbc029f gb|KJ926466| PRGD_OTU001f_2255960bda9aa647b8c2f4601bbc029f, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_2255960bda9aa647b8c2f4601bbc029f, putative proteorhodopsin gene, partial cds. KJ926466 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCAGTAAATAAAGCAGACTCAGGAATTTTCTGGAGACTGATGTTAGGAACAATAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAATGCTACACTTGGTTTTATTATCGGTATAGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAGAGCAGCAAAAAGTGGCAATAAATCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLAAVNKADSGIFWRLMLGTIVMLVGGYLGEAGYINATLGFIIGIAGWVYILYEVFSGEAGKRAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCA---------GTA---AATAAAGCAGACTCA---GGAATT------------------------------------TTCTGGAGA---CTGATGTTAGGAACAATAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTATTATCGGTATAGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAGAGCAGCAAAA------AGT---GGCAATAAATCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LMLGTIVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGIAGWVYILYEV-----F--S-GEAGKRAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926490 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_5ddb575ccc20809b9965eaa169e5354b gb|KJ926490| PRGD_OTU001f_5ddb575ccc20809b9965eaa169e5354b, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_5ddb575ccc20809b9965eaa169e5354b, putative proteorhodopsin gene, partial cds. KJ926490 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCAGTAAACAAAGCAGACTCTGGAATTTTCTGGAGATTGTTACTTGGATCAATCGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAAAAAGCTGCAAAAAGTGGAAACAAGTCTCTTGTTACTGCTTTCGGTGCGATGAGAATGATCGTAACAGTT LITVPLLMLEFYFVLAAVNKADSGIFWRLLLGSIVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKKAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCA---------GTA---AACAAAGCAGACTCT---GGAATT------------------------------------TTCTGGAGA---TTGTTACTTGGATCAATCGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAAAAAGCTGCAAAA------AGT---GGAAACAAGTCTCTT---GTT---ACT---GCT---TTC---GGT---GCGATG---AGAATGATCGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LLLGSIVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKKAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926492 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_5f9407be793203ce570fb4557cace7ae gb|KJ926492| PRGD_OTU001f_5f9407be793203ce570fb4557cace7ae, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_5f9407be793203ce570fb4557cace7ae, putative proteorhodopsin gene, partial cds. KJ926492 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGCTACTTGGTTCAATAGTAATGCTAGTAGGTGGATACCTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAAAAGCTGCAAAAAGTGGAAACAAATCTCTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLAAVNKADSGIFWRLLLGSIVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKKAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGCTACTTGGTTCAATAGTAATGCTAGTAGGTGGATACCTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAAAAGCTGCAAAA------AGT---GGAAACAAATCTCTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LLLGSIVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKKAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926465 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_1e87156cc8ea0ff293532c2d582bdb07 gb|KJ926465| PRGD_OTU001f_1e87156cc8ea0ff293532c2d582bdb07, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_1e87156cc8ea0ff293532c2d582bdb07, putative proteorhodopsin gene, partial cds. KJ926465 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683) TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCAGTAAACAAAGCAGACTCTGGAATATTCTGGAGATTGTTACTTGGTTCAATAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGCAAAAAAGCTGCTAAGAGTGGAAACAAATCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLAAVNKADSGIFWRLLLGSIVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKKAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCA---------GTA---AACAAAGCAGACTCT---GGAATA------------------------------------TTCTGGAGA---TTGTTACTTGGTTCAATAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGCAAAAAAGCTGCTAAG------AGT---GGAAACAAATCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LLLGSIVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKKAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926489 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_5d81689643afd8b1a166a8dfac5ce26b gb|KJ926489| PRGD_OTU001f_5d81689643afd8b1a166a8dfac5ce26b, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_5d81689643afd8b1a166a8dfac5ce26b, putative proteorhodopsin gene, partial cds. KJ926489 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACTGTTCCGTTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCAGTAAATAAAGCAGACGCTGGAATATTCTGGAGACTGTTAATTGGTTCAATAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGTTACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGATGCAGGTAAAAAAGCTGCTAAGAGTGGAAACAAATCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACAGTA LITVPLLMLEFYFVLAAVNKADAGIFWRLLIGSIVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGDAGKKAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTTCCGTTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCA---------GTA---AATAAAGCAGACGCT---GGAATA------------------------------------TTCTGGAGA---CTGTTAATTGGTTCAATAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGATGCAGGTAAAAAAGCTGCTAAG------AGT---GGAAACAAATCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKADA-GI------------FWR-LLIGSIVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GDAGKKAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926555 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_e8e5098ee7479d105228cd9cdd033b59 gb|KJ926555| PRGD_OTU001f_e8e5098ee7479d105228cd9cdd033b59, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_e8e5098ee7479d105228cd9cdd033b59, putative proteorhodopsin gene, partial cds. KJ926555 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -33.9602, -73.3769), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) TTAATTACAGTTCCATTACTAATGTTAGAATTCTACTTTGTTCTAGCAGCAGTTAACAAAGCAGACTCTGGAATATTCTGGAGATTGTTACTTGGATCTATAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTATAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAAAAGCTGCTAAGAGTGGAAACAAATCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTAACAGTA LITVPLLMLEFYFVLAAVNKADSGIFWRLLLGSIVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKKAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTACTAATGTTAGAATTCTACTTTGTTCTAGCAGCA---------GTT---AACAAAGCAGACTCT---GGAATA------------------------------------TTCTGGAGA---TTGTTACTTGGATCTATAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTATAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAAAAGCTGCTAAG------AGT---GGAAACAAATCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTAACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LLLGSIVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKKAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926496 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_67476231fb0b6603d07c491187be10a5 gb|KJ926496| PRGD_OTU001f_67476231fb0b6603d07c491187be10a5, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_67476231fb0b6603d07c491187be10a5, putative proteorhodopsin gene, partial cds. KJ926496 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683) TTAATTACAGTTCCATTACTAATGTTAGAATTCTACTTTGTTCTAGCTGCAGTAAACAAAGCAGACTCTGGAATCTTCTGGAGATTAATGCTTGGAACATTAGTAATGCTAATTGGTGGATACTTGGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAAAAGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLAAVNKADSGIFWRLMLGTLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKKAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTACTAATGTTAGAATTCTACTTTGTTCTAGCTGCA---------GTA---AACAAAGCAGACTCT---GGAATC------------------------------------TTCTGGAGA---TTAATGCTTGGAACATTAGTAATGCTAATTGGTGGATACTTGGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAAAAGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LMLGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKKAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926523 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_99adef9cf947059baa13a6541cf2adb9 gb|KJ926523| PRGD_OTU001f_99adef9cf947059baa13a6541cf2adb9, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_99adef9cf947059baa13a6541cf2adb9, putative proteorhodopsin gene, partial cds. KJ926523 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCAGTAAACAAAGCTGACTCTGGAATATTCTGGAGATTAATGCTTGGAACATTAGTTATGCTAATAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAAAAGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACAGTA LITVPLLMLEFYFVLAAVNKADSGIFWRLMLGTLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKKAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCA---------GTA---AACAAAGCTGACTCT---GGAATA------------------------------------TTCTGGAGA---TTAATGCTTGGAACATTAGTTATGCTAATAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAAAAGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LMLGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKKAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926457 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_08eccde5180278ff3264ff2354dc9f3b gb|KJ926457| PRGD_OTU001f_08eccde5180278ff3264ff2354dc9f3b, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_08eccde5180278ff3264ff2354dc9f3b, putative proteorhodopsin gene, partial cds. KJ926457 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637; -33.9602, -73.3769), Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGAACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGATATACATTCTTTATGAAGTATTCTCAGGTGAAGCTGGTAAAAAAGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLAAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWIYILYEVFSGEAGKKAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGAACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGATATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCTGGTAAAAAAGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWIYILYEV-----F--S-GEAGKKAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926461 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_0f7176e850223305dcdd743d0f66ceb0 gb|KJ926461| PRGD_OTU001f_0f7176e850223305dcdd743d0f66ceb0, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_0f7176e850223305dcdd743d0f66ceb0, putative proteorhodopsin gene, partial cds. KJ926461 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73) TTAATTACAGTTCCATTACTAATGTTAGAATTCTACTTTGTTCTAGCTGCAGTAAATAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGAACTTTAGTAATGTTAATCGGTGGGTACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAAAAGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLAAVNKADSGIFWRLMLGTLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKKAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTACTAATGTTAGAATTCTACTTTGTTCTAGCTGCA---------GTA---AATAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGAACTTTAGTAATGTTAATCGGTGGGTACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAAAAGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LMLGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKKAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926471 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_2f2272dabe4a9c46e13286508b876d2f gb|KJ926471| PRGD_OTU001f_2f2272dabe4a9c46e13286508b876d2f, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_2f2272dabe4a9c46e13286508b876d2f, putative proteorhodopsin gene, partial cds. KJ926471 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCAGTAAATAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGAACGTTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAAAAGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLAAVNKADSGIFWRLMLGTLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKKAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCA---------GTA---AATAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGAACGTTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAAAAGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LMLGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKKAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926493 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_623a949b057b997b04a2f54fa89754a8 gb|KJ926493| PRGD_OTU001f_623a949b057b997b04a2f54fa89754a8, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_623a949b057b997b04a2f54fa89754a8, putative proteorhodopsin gene, partial cds. KJ926493 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTTCCATTACTAATGTTAGAATTCTACTTTGTTCTAGCTGCAGTAAATAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGAACGTTAGTAATGTTAATTGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAGAAAGCTGCTAAGAGTGGAAACAAAGCACTTGTTACCGCTTTTGGTGCGATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLAAVNKADSGIFWRLMLGTLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKKAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTACTAATGTTAGAATTCTACTTTGTTCTAGCTGCA---------GTA---AATAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGAACGTTAGTAATGTTAATTGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAGAAAGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACC---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LMLGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKKAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926516 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_908aec22ef5326191d4ead0ac80b8d2a gb|KJ926516| PRGD_OTU001f_908aec22ef5326191d4ead0ac80b8d2a, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_908aec22ef5326191d4ead0ac80b8d2a, putative proteorhodopsin gene, partial cds. KJ926516 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGAACGTTAGTAATGTTAATTGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAAAAGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLAAVNKADSGIFWRLMLGTLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKKAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGAACGTTAGTAATGTTAATTGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAAAAGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LMLGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKKAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926503 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_719dd4337f68511d32b8c1665edf0c12 gb|KJ926503| PRGD_OTU001f_719dd4337f68511d32b8c1665edf0c12, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_719dd4337f68511d32b8c1665edf0c12, putative proteorhodopsin gene, partial cds. KJ926503 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTTCCATTATTAATGTTAGAATTCTATTTTGTTCTAGCTGCAGTAAATAAAGCAGATTCAGGAATATTCTGGAGATTGATGCTTGGAACATTAGTAATGTTAATTGGTGGATATTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGATGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGCAAAAAAGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLAAVNKADSGIFWRLMLGTLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKKAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTATTAATGTTAGAATTCTATTTTGTTCTAGCTGCA---------GTA---AATAAAGCAGATTCA---GGAATA------------------------------------TTCTGGAGA---TTGATGCTTGGAACATTAGTAATGTTAATTGGTGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGATGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGCAAAAAAGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LMLGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKKAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926463 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_1708617015f5120ad7363eca8b7ab0ad gb|KJ926463| PRGD_OTU001f_1708617015f5120ad7363eca8b7ab0ad, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_1708617015f5120ad7363eca8b7ab0ad, putative proteorhodopsin gene, partial cds. KJ926463 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45; -33.28, 45.35) TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGAACATTAGTAATGTTAATTGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAAAAGCTGCTAAGAGTGGAAACAAGGCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLAAVNKADSGIFWRLMLGTLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKKAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGAACATTAGTAATGTTAATTGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAAAAGCTGCTAAG------AGT---GGAAACAAGGCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LMLGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKKAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926494 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_63bec1b2c6865a3ee7299e42e80c6857 gb|KJ926494| PRGD_OTU001f_63bec1b2c6865a3ee7299e42e80c6857, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_63bec1b2c6865a3ee7299e42e80c6857, putative proteorhodopsin gene, partial cds. KJ926494 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCAGTAAACAAAGCAGATGCAGGAATTTTCTGGAGATTGATGCTTGGAACATTAGTAATGTTAATTGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACGCTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAAAAGCTGCTAAGAGTGGAAACAAATCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLAAVNKADAGIFWRLMLGTLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKKAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCA---------GTA---AACAAAGCAGATGCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGAACATTAGTAATGTTAATTGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACGCTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAAAAGCTGCTAAG------AGT---GGAAACAAATCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKADA-GI------------FWR-LMLGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKKAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926539 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_c79b4c6d89be8d4a6a38014bd2082d3d gb|KJ926539| PRGD_OTU001f_c79b4c6d89be8d4a6a38014bd2082d3d, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_c79b4c6d89be8d4a6a38014bd2082d3d, putative proteorhodopsin gene, partial cds. KJ926539 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCAGCAGTAAACAAAGCAGACTCTGGAATTTTCTGGAGACTGATGATTGGAACATTAGTTATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATTAATGCTACACTTGGTTTCGTAATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAAAAAGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTAACAGTA LITVPLLMLEFYFVLAAVNKADSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFVIGMAGWIYILYEVFSGEAGKKAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCAGCA---------GTA---AACAAAGCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTGATGATTGGAACATTAGTTATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCGTAATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAAAAAGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTAACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEV-----F--S-GEAGKKAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926532 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_aedcbbc399ab9814fee12bb35214b948 gb|KJ926532| PRGD_OTU001f_aedcbbc399ab9814fee12bb35214b948, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_aedcbbc399ab9814fee12bb35214b948, putative proteorhodopsin gene, partial cds. KJ926532 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTTCCATTATTAATGTTAGAATTCTATTTTGTTCTAGCAGCGGTAAACAAAGCAGACTCTGGAATTTTCTGGAGACTGATGATTGGAACATTAGTTATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATTAATGCTACACTTGGTTTCGTAATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAAAAAGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTAACAGTA LITVPLLMLEFYFVLAAVNKADSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFVIGMAGWIYILYEVFSGEAGKKAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTATTAATGTTAGAATTCTATTTTGTTCTAGCAGCG---------GTA---AACAAAGCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTGATGATTGGAACATTAGTTATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCGTAATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAAAAAGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTAACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEV-----F--S-GEAGKKAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926518 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_90dfe0165b4b87b45671e73e044460e5 gb|KJ926518| PRGD_OTU001f_90dfe0165b4b87b45671e73e044460e5, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_90dfe0165b4b87b45671e73e044460e5, putative proteorhodopsin gene, partial cds. KJ926518 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCAGTAAACAAAGCAGACTCTGGAATTTTCTGGAGACTGATGATTGGAACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATTAATGCTACACTTGGTTTCGTAATCGGTATGGCTGGATGGATATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAAAAAGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTAACAGTA LITVPLLMLEFYFVLAAVNKADSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFVIGMAGWIYILYEVFSGEAGKKAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCA---------GTA---AACAAAGCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTGATGATTGGAACATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCGTAATCGGTATGGCTGGATGGATATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAAAAAGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTAACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEV-----F--S-GEAGKKAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926549 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_de0a149bfa160bdd9db1258abf9fa9a0 gb|KJ926549| PRGD_OTU001f_de0a149bfa160bdd9db1258abf9fa9a0, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_de0a149bfa160bdd9db1258abf9fa9a0, putative proteorhodopsin gene, partial cds. KJ926549 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACAGTTCCGTTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCAGTAAACAAAGCAGACTCAGGAATTTTCTGGAGACTGATGCTTGGAACATTAGTTATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATTAACGCTACACTTGGTTTCGTAATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAAAAAGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTAACAGTA LITVPLLMLEFYFVLAAVNKADSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFVIGMAGWIYILYEVFSGEAGKKAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCGTTACTAATGTTAGAATTCTATTTTGTTCTAGCTGCA---------GTA---AACAAAGCAGACTCA---GGAATT------------------------------------TTCTGGAGA---CTGATGCTTGGAACATTAGTTATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCGTAATCGGTATGGCTGGATGGATCTACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAAAAAGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTAACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIYILYEV-----F--S-GEAGKKAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926556 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_ea9981ab2a9be8b175459c8d6daaff34 gb|KJ926556| PRGD_OTU001f_ea9981ab2a9be8b175459c8d6daaff34, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_ea9981ab2a9be8b175459c8d6daaff34, putative proteorhodopsin gene, partial cds. KJ926556 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTGATTACAGTTCCATTACTAATGTTAGAATTCTACTTTGTTCTAGCTGCAGTAAATAAAGCAGATTCAGGAATTTTCTGGAGATTGCTACTTGGTTCATTAGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTAGGTTTCATTATTGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAAAAGCTGCTAAGAGTGGAAACAAGTCACTAGTTACTGCTTTTGGTGCGATGAGAATGATCGTAACAGTA LITVPLLMLEFYFVLAAVNKADSGIFWRLLLGSLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKKAAKSGNKSLVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACAGTTCCATTACTAATGTTAGAATTCTACTTTGTTCTAGCTGCA---------GTA---AATAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGCTACTTGGTTCATTAGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTCATTATTGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAAAAGCTGCTAAG------AGT---GGAAACAAGTCACTA---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTAACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LLLGSLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKKAAK--S-GNKSL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926529 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_a6b825525f167d0f82256b328d37f38a gb|KJ926529| PRGD_OTU001f_a6b825525f167d0f82256b328d37f38a, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_a6b825525f167d0f82256b328d37f38a, putative proteorhodopsin gene, partial cds. KJ926529 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACAGTTCCATTATTGATGTTAGAATTCTACTTTGTTCTAGCAGCAGTAAACAAAGCTGATTCAGGTATATTCTGGAGATTGATGCTTGGAACATTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACGCTTGGTTTCATTATTGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAAAAGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLAAVNKADSGIFWRLMLGTLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKKAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTACTTTGTTCTAGCAGCA---------GTA---AACAAAGCTGATTCA---GGTATA------------------------------------TTCTGGAGA---TTGATGCTTGGAACATTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACGCTTGGT---TTCATTATTGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAAAAGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LMLGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKKAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926530 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_aa7902c41d12ad1e128cdbe7dafdac02 gb|KJ926530| PRGD_OTU001f_aa7902c41d12ad1e128cdbe7dafdac02, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_aa7902c41d12ad1e128cdbe7dafdac02, putative proteorhodopsin gene, partial cds. KJ926530 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683) TTAATTACAGTTCCATTACTAATGTTAGAATTCTACTTTGTTCTAGCAGCAGTAAACAAAGCTGACTCTGGAATTTTCTGGAGATTAATGCTTGGAACATTAGTGATGTTAATTGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAAAAGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLAAVNKADSGIFWRLMLGTLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKKAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTACTAATGTTAGAATTCTACTTTGTTCTAGCAGCA---------GTA---AACAAAGCTGACTCT---GGAATT------------------------------------TTCTGGAGA---TTAATGCTTGGAACATTAGTGATGTTAATTGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAAAAGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LMLGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKKAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926469 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_2d9c06dffb5074af2ed15045d0d124c0 gb|KJ926469| PRGD_OTU001f_2d9c06dffb5074af2ed15045d0d124c0, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_2d9c06dffb5074af2ed15045d0d124c0, putative proteorhodopsin gene, partial cds. KJ926469 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATAACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCAGTAAACAAAGCAGACTCTGGAATATTCTGGAGACTGATGATCGGAACATTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGCAAAAAAGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMIGTLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKKAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCA---------GTA---AACAAAGCAGACTCT---GGAATA------------------------------------TTCTGGAGA---CTGATGATCGGAACATTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGCAAAAAAGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKKAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926517 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_90c9afec34a4736b48eb4ab50b41641e gb|KJ926517| PRGD_OTU001f_90c9afec34a4736b48eb4ab50b41641e, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_90c9afec34a4736b48eb4ab50b41641e, putative proteorhodopsin gene, partial cds. KJ926517 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATAACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCAGTAAACAAAGCAGACTCTGGAATTTTCTGGAGACTGATGATTGGAACATTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAAAAGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCATTTGGTGCGATGAGAATGATCGTTACTGTT LITVPLLMLEFYFVLSAVNKADSGIFWRLMIGTLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKKAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCA---------GTA---AACAAAGCAGACTCT---GGAATT------------------------------------TTCTGGAGA---CTGATGATTGGAACATTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAAAAGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCA---TTT---GGT---GCGATG---AGAATGATCGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKKAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926505 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_7328a222c31d880562c098e53016a9ee gb|KJ926505| PRGD_OTU001f_7328a222c31d880562c098e53016a9ee, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_7328a222c31d880562c098e53016a9ee, putative proteorhodopsin gene, partial cds. KJ926505 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGACTGATGATTGGAACATTAGTAATGTTAATTGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGCAAAAAAGCTGCTAAGAGTGGAAACAAAGCTCTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACAGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMIGTLVMLIGGYLGEAGYINATLGFVIGMAGWVYILYEVFSGEAGKKAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---CTGATGATTGGAACATTAGTAATGTTAATTGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGCAAAAAAGCTGCTAAG------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEV-----F--S-GEAGKKAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926546 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_d2a0c25e046cc69d891e8d36ce11230d gb|KJ926546| PRGD_OTU001f_d2a0c25e046cc69d891e8d36ce11230d, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_d2a0c25e046cc69d891e8d36ce11230d, putative proteorhodopsin gene, partial cds. KJ926546 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683) TTAATTACGGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCAGTAAATAAAGCAGACTCAGGAATTTTCTGGAGACTGATGATAGGAACATTAGTAATGTTAATTGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAAAAGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCGATGAGAATGATCGTTACAGTT LITVPLLMLEFYFVLSAVNKADSGIFWRLMIGTLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKKAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACGGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCA---------GTA---AATAAAGCAGACTCA---GGAATT------------------------------------TTCTGGAGA---CTGATGATAGGAACATTAGTAATGTTAATTGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAAAAGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCGATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKKAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926515 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_8d8ae578b78e152caa9caf2c18758044 gb|KJ926515| PRGD_OTU001f_8d8ae578b78e152caa9caf2c18758044, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_8d8ae578b78e152caa9caf2c18758044, putative proteorhodopsin gene, partial cds. KJ926515 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833) TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCAGTAAACAAAGCAGACTCAGGAATTTTCTGGAGACTGATGATTGGAACACTAGTAATGCTACTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTTGTTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAAAAGCTGCTAAGAGTGGAAACAAAGCACTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLSAVNKADSGIFWRLMIGTLVMLLGGYLGEAGYINATLGFVIGMAGWVYILYEVFSGEAGKKAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCA---------GTA---AACAAAGCAGACTCA---GGAATT------------------------------------TTCTGGAGA---CTGATGATTGGAACACTAGTAATGCTACTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTTATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAAAAGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKADS-GI------------FWR-LMIGTLVMLLGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWVYILYEV-----F--S-GEAGKKAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11/Himb5]_KJ926527 [IV-Alpha8-SAR11/Himb5] PRGD_OTU001f_a022354455a4982ceab7157def597ced gb|KJ926527| PRGD_OTU001f_a022354455a4982ceab7157def597ced, putative proteorhodopsin gene, partial cds. PRGD_OTU001f_a022354455a4982ceab7157def597ced, putative proteorhodopsin gene, partial cds. KJ926527 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 Himb5-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 Himb5-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCTGCAGTAAACAAAGCAGATTCAGGAATTTTCTGGAGATTGATGCTTGGAACATTAGTAATGCTAATTGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTTATAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCAGGTGAAGCAGGTAAAAAAGCTGCTAAGAGTGGAAACAAAGCACTTGTAACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTA LITVPLLMLEFYFVLAAVNKADSGIFWRLMLGTLVMLIGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKKAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCTGCA---------GTA---AACAAAGCAGATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGAACATTAGTAATGCTAATTGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTATAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCA---GGTGAAGCAGGTAAAAAAGCTGCTAAG------AGT---GGAAACAAAGCACTT---GTA---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKADS-GI------------FWR-LMLGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKKAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11]_KJ926571 [IV-Alpha8-SAR11] PRGD_OTU001g_4ed16e5178b587cc484c1da94c70ec7a gb|KJ926571| PRGD_OTU001g_4ed16e5178b587cc484c1da94c70ec7a, putative proteorhodopsin gene, partial cds. PRGD_OTU001g_4ed16e5178b587cc484c1da94c70ec7a, putative proteorhodopsin gene, partial cds. KJ926571 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683) TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCTGTAAATAAAGCAAACTCTGGAATATTCTGGAGATTGATGATTGGTACAGTAGTAATGCTAGTTGGAGGATACTTAGGAGAAGCAGGATACATTAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCAGGCGAAGCAGGAAAAAATGCAGCAAAAAGCGGAAACAAAGCACTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTT LITVPLLMLEFYFVLAAVNKANSGIFWRLMIGTVVMLVGGYLGEAGYINATLGFVIGMAGWFYILYEVFSGEAGKNAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCT---------GTA---AATAAAGCAAACTCT---GGAATA------------------------------------TTCTGGAGA---TTGATGATTGGTACAGTAGTAATGCTAGTTGGAGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGCGAAGCAGGAAAAAATGCAGCAAAA------AGC---GGAAACAAAGCACTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LMIGTVVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKNAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11]_KJ926576 [IV-Alpha8-SAR11] PRGD_OTU001g_7e7f211bb64c12a1ef27d59a147db2e5 gb|KJ926576| PRGD_OTU001g_7e7f211bb64c12a1ef27d59a147db2e5, putative proteorhodopsin gene, partial cds. PRGD_OTU001g_7e7f211bb64c12a1ef27d59a147db2e5, putative proteorhodopsin gene, partial cds. KJ926576 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCAGTAAATAAAGCAAACTCTGGAATATTCTGGAGATTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACACTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCAGGCGAAGCAGGAAAAAATGCAGCAAAAAGCGGAAACAAAGCACTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTT LITVPLLMLEFYFVLAAVNKANSGIFWRLMIGTLVMLIGGYLGEAGYINTTLGFVIGMAGWFYILYEVFSGEAGKNAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---AATAAAGCAAACTCT---GGAATA------------------------------------TTCTGGAGA---TTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGCGAAGCAGGAAAAAATGCAGCAAAA------AGC---GGAAACAAAGCACTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NT------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKNAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11]_KJ926575 [IV-Alpha8-SAR11] PRGD_OTU001g_73255b5e281987f107eeb5d7e9d106b7 gb|KJ926575| PRGD_OTU001g_73255b5e281987f107eeb5d7e9d106b7, putative proteorhodopsin gene, partial cds. PRGD_OTU001g_73255b5e281987f107eeb5d7e9d106b7, putative proteorhodopsin gene, partial cds. KJ926575 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCAGTAAATAAAGCAAACTCTGGAATTTTCTGGAGATTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCAGGATACATCAACACTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTCTCAGGCGAAGCAGGAAAAAATGCAGCGAAAAGTGGAAACAAGGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTT LITVPLLMLEFYFVLAAVNKANSGIFWRLMIGTLVMLIGGYLGEAGYINTTLGFVIGMAGWFYILYEVFSGEAGKNAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---AATAAAGCAAACTCT---GGAATT------------------------------------TTCTGGAGA---TTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGCGAAGCAGGAAAAAATGCAGCGAAA------AGT---GGAAACAAGGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NT------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKNAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11]_KJ926564 [IV-Alpha8-SAR11] PRGD_OTU001g_otuREP_a5976e9c460ba8463821f97695d71282 gb|KJ926564| PRGD_OTU001g_otuREP_a5976e9c460ba8463821f97695d71282, putative proteorhodopsin gene, partial cds. PRGD_OTU001g_otuREP_a5976e9c460ba8463821f97695d71282, putative proteorhodopsin gene, partial cds. KJ926564 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCAGTAAATAAAGCAAACTCTGGAGTATTCTGGAGATTGATGATTGGTACTTTAGTAATGCTAGTTGGCGGATACTTAGGAGAAGCAGGATACATCAACACTACACTTGGTTTTGTAATCGGTATGGCTGGTTGGTTCTACATTCTTTATGAAGTATTCTCAGGCGAAGCAGGAAAACTTGCAGCGAAAAGTGGAAACAAAGCTCTTGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTT LITVPLLMLEFYFVLAAVNKANSGVFWRLMIGTLVMLVGGYLGEAGYINTTLGFVIGMAGWFYILYEVFSGEAGKLAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCA---------GTA---AATAAAGCAAACTCT---GGAGTA------------------------------------TTCTGGAGA---TTGATGATTGGTACTTTAGTAATGCTAGTTGGCGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGTTGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGCGAAGCAGGAAAACTTGCAGCGAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKANS-GV------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NT------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKLAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11]_KJ926584 [IV-Alpha8-SAR11] PRGD_OTU001g_cd985e26b8fe6bfbc1a92fc51c69cf3e gb|KJ926584| PRGD_OTU001g_cd985e26b8fe6bfbc1a92fc51c69cf3e, putative proteorhodopsin gene, partial cds. PRGD_OTU001g_cd985e26b8fe6bfbc1a92fc51c69cf3e, putative proteorhodopsin gene, partial cds. KJ926584 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683) TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCAGTAAACAAAGCAAACTCTGGAATATTCTGGAGATTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCAGGATACATTAATGCTACACTTGGTTTTGTAATCGGTATGGCAGGATGGTTCTACATTCTTTATGAAGTATTTTCAGGTGAAGCAGGAAAAAATGCAGCGAAGAGTGGAAACAAAGCTCTAGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTT LITVPLLMLEFYFVLAAVNKANSGIFWRLMIGTLVMLIGGYLGEAGYINATLGFVIGMAGWFYILYEVFSGEAGKNAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---AACAAAGCAAACTCT---GGAATA------------------------------------TTCTGGAGA---TTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGATGGTTCTACATTCTTTATGAAGTA---------------TTT------TCA---GGTGAAGCAGGAAAAAATGCAGCGAAG------AGT---GGAAACAAAGCTCTA---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKNAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11]_KJ926585 [IV-Alpha8-SAR11] PRGD_OTU001g_e3fbbd66e257274a29b6c0020dac07a1 gb|KJ926585| PRGD_OTU001g_e3fbbd66e257274a29b6c0020dac07a1, putative proteorhodopsin gene, partial cds. PRGD_OTU001g_e3fbbd66e257274a29b6c0020dac07a1, putative proteorhodopsin gene, partial cds. KJ926585 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683) TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCAGTAAACAAAGCAAACTCTGGAATATTCTGGAGATTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCAGGATACATTAATGCTACACTTGGTTTTGTAATCGGTATGGCAGGATGGTTCTACATTCTTTATGAAGTATTTTCAGGTGAAGCAGGAAAAAATGCAGCGAAGAGTGGAAACAAAGCTCTAGTTACTGCATTTGGTGCTATGAGAATGATCGTTACAGTT LITVPLLMLEFYFVLAAVNKANSGIFWRLMIGTLVMLIGGYLGEAGYINATLGFVIGMAGWFYILYEVFSGEAGKNAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCA---------GTA---AACAAAGCAAACTCT---GGAATA------------------------------------TTCTGGAGA---TTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCAGGATGGTTCTACATTCTTTATGAAGTA---------------TTT------TCA---GGTGAAGCAGGAAAAAATGCAGCGAAG------AGT---GGAAACAAAGCTCTA---GTT---ACT---GCA---TTT---GGT---GCTATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKNAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11]_KJ926565 [IV-Alpha8-SAR11] PRGD_OTU001g_11324db91cda967b11eae51b686036c4 gb|KJ926565| PRGD_OTU001g_11324db91cda967b11eae51b686036c4, putative proteorhodopsin gene, partial cds. PRGD_OTU001g_11324db91cda967b11eae51b686036c4, putative proteorhodopsin gene, partial cds. KJ926565 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCAGTAAACAAAGCAAACTCTGGAATATTCTGGAGACTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCAGGATACATTAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTTTCAGGTGAAGCAGGAAAAAATGCAGCGAAGAGTGGAAACAAAGCTCTAGTTACTGCATTTGGTGCAATGAGAATGATCGTTACAGTT LITVPLLMLEFYFVLAAVNKANSGIFWRLMIGTLVMLIGGYLGEAGYINATLGFVIGMAGWFYILYEVFSGEAGKNAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCA---------GTA---AACAAAGCAAACTCT---GGAATA------------------------------------TTCTGGAGA---CTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTT------TCA---GGTGAAGCAGGAAAAAATGCAGCGAAG------AGT---GGAAACAAAGCTCTA---GTT---ACT---GCA---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKNAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11]_KJ926580 [IV-Alpha8-SAR11] PRGD_OTU001g_9e757c7c5ee01749c8a7e04603f8be4b gb|KJ926580| PRGD_OTU001g_9e757c7c5ee01749c8a7e04603f8be4b, putative proteorhodopsin gene, partial cds. PRGD_OTU001g_9e757c7c5ee01749c8a7e04603f8be4b, putative proteorhodopsin gene, partial cds. KJ926580 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683) TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCAGTAAATAAAGCAAACTCTGGAATATTTTGGAGATTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCAGGATACATTAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTTTCAGGTGAAGCAGGTAAAAATGCAGCGAAGAGTGGAAACAAAGCTCTTGTTACTGCATTTGGTGCTATGAGAATGATCGTTACAGTT LITVPLLMLEFYFVLAAVNKANSGIFWRLMIGTLVMLIGGYLGEAGYINATLGFVIGMAGWFYILYEVFSGEAGKNAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---AATAAAGCAAACTCT---GGAATA------------------------------------TTTTGGAGA---TTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTT------TCA---GGTGAAGCAGGTAAAAATGCAGCGAAG------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCTATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKNAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11]_KJ926583 [IV-Alpha8-SAR11] PRGD_OTU001g_b41a0d1da6133750e99cf242e737cf95 gb|KJ926583| PRGD_OTU001g_b41a0d1da6133750e99cf242e737cf95, putative proteorhodopsin gene, partial cds. PRGD_OTU001g_b41a0d1da6133750e99cf242e737cf95, putative proteorhodopsin gene, partial cds. KJ926583 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCAGTAAATAAAGCAAACTCTGGAATATTCTGGAGATTGATGATTGGTACTTTAGTAATGTTAGTCGGTGGATACTTGGGAGAAGCAGGATACATTAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTGTTTTCAGGTGAAGCAGGTAAAAATGCAGCAAAGAGCGGAAACAAAGCTCTTGTTACTGCATTTGGTGCTATGAGAATGATCGTTACAGTT LITVPLLMLEFYFVLAAVNKANSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFVIGMAGWFYILYEVFSGEAGKNAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---AATAAAGCAAACTCT---GGAATA------------------------------------TTCTGGAGA---TTGATGATTGGTACTTTAGTAATGTTAGTCGGTGGATACTTGGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTG---------------TTT------TCA---GGTGAAGCAGGTAAAAATGCAGCAAAG------AGC---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCTATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKNAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11]_KJ926574 [IV-Alpha8-SAR11] PRGD_OTU001g_680f84b8a32a3f18e6f0f683887d42de gb|KJ926574| PRGD_OTU001g_680f84b8a32a3f18e6f0f683887d42de, putative proteorhodopsin gene, partial cds. PRGD_OTU001g_680f84b8a32a3f18e6f0f683887d42de, putative proteorhodopsin gene, partial cds. KJ926574 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73) TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCAGTAAATAAAGCAAACTCTGGAATATTCTGGAGATTGATGATTGGTACTTTAGTAATGTTAGTCGGTGGATACTTAGGAGAAGCAGGATACATTAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTGTTTTCAGGTGAAGCAGGTAAAAATGCAGCGAAGAGCGGAAACAAAGCTCTTGTTACTGCGTTTGGTGCTATGAGAATGATCGTTACAGTT LITVPLLMLEFYFVLAAVNKANSGIFWRLMIGTLVMLVGGYLGEAGYINATLGFVIGMAGWFYILYEVFSGEAGKNAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---AATAAAGCAAACTCT---GGAATA------------------------------------TTCTGGAGA---TTGATGATTGGTACTTTAGTAATGTTAGTCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTG---------------TTT------TCA---GGTGAAGCAGGTAAAAATGCAGCGAAG------AGC---GGAAACAAAGCTCTT---GTT---ACT---GCG---TTT---GGT---GCTATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKNAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11]_KJ926581 [IV-Alpha8-SAR11] PRGD_OTU001g_a059972251a670da1afc7761ff0bfcc0 gb|KJ926581| PRGD_OTU001g_a059972251a670da1afc7761ff0bfcc0, putative proteorhodopsin gene, partial cds. PRGD_OTU001g_a059972251a670da1afc7761ff0bfcc0, putative proteorhodopsin gene, partial cds. KJ926581 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCAGTAAATAAAGCAAACTCTGGAATATTCTGGAGATTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCAGGATACATTAATGCTACACTTGGTTTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTATTTTCAGGTGAAGCAGGTAAAATGGCAGCGAAGAGTGGAAACAAAGCTCTTGTTACTGCATTTGGTGCTATGAGAATGATCGTTACAGTT LITVPLLMLEFYFVLAAVNKANSGIFWRLMIGTLVMLIGGYLGEAGYINATLGFVIGMAGWFYILYEVFSGEAGKMAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---AATAAAGCAAACTCT---GGAATA------------------------------------TTCTGGAGA---TTGATGATTGGTACTTTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCTGGATGGTTCTACATTCTTTATGAAGTA---------------TTT------TCA---GGTGAAGCAGGTAAAATGGCAGCGAAG------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCTATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKMAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11]_KJ926569 [IV-Alpha8-SAR11] PRGD_OTU001g_4cf9706f2a59188f69fdf969f7b2dbd7 gb|KJ926569| PRGD_OTU001g_4cf9706f2a59188f69fdf969f7b2dbd7, putative proteorhodopsin gene, partial cds. PRGD_OTU001g_4cf9706f2a59188f69fdf969f7b2dbd7, putative proteorhodopsin gene, partial cds. KJ926569 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419) TTAATTACAGTTCCACTATTGATGCTAGAATTCTATTTTGTTTTAGCAGCAGTAGGTAAAGCAAACTCTGGAGTATTCTGGAGATTAATGCTTGGTACTTTAGTGATGCTAGTTGGAGGATACTTAGGAGAAGCAGGTTACATCAATTCTATGCTTGGTTTCATTATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTTTCAGGTGAAGCAGGTAAAATGGCAGCGAAAAGTGGAAACAAAGCTCTTGTTACTGCGTTTGGTGCTATGAGAATGATCGTTACAGTT LITVPLLMLEFYFVLAAVGKANSGVFWRLMLGTLVMLVGGYLGEAGYINSMLGFIIGMAGWIYILYEVFSGEAGKMAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCACTATTGATGCTAGAATTCTATTTTGTTTTAGCAGCA---------GTA---GGTAAAGCAAACTCT---GGAGTA------------------------------------TTCTGGAGA---TTAATGCTTGGTACTTTAGTGATGCTAGTTGGAGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATTCT------------------ATGCTTGGT---TTCATTATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTT------TCA---GGTGAAGCAGGTAAAATGGCAGCGAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCG---TTT---GGT---GCTATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-GKANS-GV------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NS------MLG-FIIGMAGWIYILYEV-----F--S-GEAGKMAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11]_KJ926572 [IV-Alpha8-SAR11] PRGD_OTU001g_5c4f5876a1ebf0ba1a74bbafa93a078c gb|KJ926572| PRGD_OTU001g_5c4f5876a1ebf0ba1a74bbafa93a078c, putative proteorhodopsin gene, partial cds. PRGD_OTU001g_5c4f5876a1ebf0ba1a74bbafa93a078c, putative proteorhodopsin gene, partial cds. KJ926572 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACAGTTCCACTATTGATGCTAGAATTCTATTTTGTTCTTGCAGCAGTAGGTAAAGCAAACTCTGGAGTATTCTGGAGATTAATGCTTGGTACTTTAGTAATGCTAGTTGGAGGATACTTAGGAGAAGCAGGTTACATCAATTCTATGCTTGGTTTCATTATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTTTCAGGTGAAGCAGGTAAAATGGCAGCGAAAAGTGGAAACAAAGCTCTTGTTACTGCGTTTGGTGCTATGAGAATGATCGTTACAGTT LITVPLLMLEFYFVLAAVGKANSGVFWRLMLGTLVMLVGGYLGEAGYINSMLGFIIGMAGWIYILYEVFSGEAGKMAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCACTATTGATGCTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---GGTAAAGCAAACTCT---GGAGTA------------------------------------TTCTGGAGA---TTAATGCTTGGTACTTTAGTAATGCTAGTTGGAGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATTCT------------------ATGCTTGGT---TTCATTATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTT------TCA---GGTGAAGCAGGTAAAATGGCAGCGAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCG---TTT---GGT---GCTATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-GKANS-GV------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NS------MLG-FIIGMAGWIYILYEV-----F--S-GEAGKMAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11]_KJ926579 [IV-Alpha8-SAR11] PRGD_OTU001g_9d91066218ad4b630d11b3b46461f2cc gb|KJ926579| PRGD_OTU001g_9d91066218ad4b630d11b3b46461f2cc, putative proteorhodopsin gene, partial cds. PRGD_OTU001g_9d91066218ad4b630d11b3b46461f2cc, putative proteorhodopsin gene, partial cds. KJ926579 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTTCCACTATTGATGCTAGAATTCTATTTTGTTCTTGCAGCAGTAGGTAAAGCAAACTCTGGAGTATTCTGGAGATTGATGCTTGGTACTTTAGTAATGCTAGTTGGAGGATACTTAGGAGAAGCAGGTCACATCAATTCTATGCTTGGTTTTGTTATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTATTTTCAGGTGAAGCAGGTAAAATGGCAGCGAAAAGTGGAAACAAAGCTCTTGTTACTGCGTTTGGTGCTATGAGAATGATCGTTACAGTT LITVPLLMLEFYFVLAAVGKANSGVFWRLMLGTLVMLVGGYLGEAGHINSMLGFVIGMAGWIYILYEVFSGEAGKMAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCACTATTGATGCTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---GGTAAAGCAAACTCT---GGAGTA------------------------------------TTCTGGAGA---TTGATGCTTGGTACTTTAGTAATGCTAGTTGGAGGATACTTAGGAGAA---------GCA------------------GGT------CAC---------------------------------ATC------------------------------------------------------------------AATTCT------------------ATGCTTGGT---TTTGTTATCGGTATGGCTGGATGGATCTACATCTTATATGAAGTA---------------TTT------TCA---GGTGAAGCAGGTAAAATGGCAGCGAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCG---TTT---GGT---GCTATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-GKANS-GV------------FWR-LMLGTLVMLVGGYLGE---A------G--H-----------I----------------------NS------MLG-FVIGMAGWIYILYEV-----F--S-GEAGKMAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11]_KJ926568 [IV-Alpha8-SAR11] PRGD_OTU001g_41691c6351e610fe7d7825bedc7d6eb3 gb|KJ926568| PRGD_OTU001g_41691c6351e610fe7d7825bedc7d6eb3, putative proteorhodopsin gene, partial cds. PRGD_OTU001g_41691c6351e610fe7d7825bedc7d6eb3, putative proteorhodopsin gene, partial cds. KJ926568 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTACTAGCAGCAGTAGGTAAAGCAAATTCTGGAGTATTCTGGAGATTGTTAATTGGTTCAGTAGTAATGCTAGTTGGAGGATATTTAGGAGAAGCAGGTTACATCAATTCTATGCTTGGTTTCGTTATCGGTATGGCTGGATGGATCTACATCTTATACGAAGTATTTTCTGGTGAAGCAGGAAAAATGGCATCAAAAAGTGGAAACAAAGCTCTTGTTACTGCATTCGGTGCTATGAGAATGATCGTTACAGTA LITVPLLMLEFYFVLAAVGKANSGVFWRLLIGSVVMLVGGYLGEAGYINSMLGFVIGMAGWIYILYEVFSGEAGKMASKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTACTAGCAGCA---------GTA---GGTAAAGCAAATTCT---GGAGTA------------------------------------TTCTGGAGA---TTGTTAATTGGTTCAGTAGTAATGCTAGTTGGAGGATATTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATTCT------------------ATGCTTGGT---TTCGTTATCGGTATGGCTGGATGGATCTACATCTTATACGAAGTA---------------TTT------TCT---GGTGAAGCAGGAAAAATGGCATCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTC---GGT---GCTATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-GKANS-GV------------FWR-LLIGSVVMLVGGYLGE---A------G--Y-----------I----------------------NS------MLG-FVIGMAGWIYILYEV-----F--S-GEAGKMASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11]_KJ926582 [IV-Alpha8-SAR11] PRGD_OTU001g_b1e47cd05f9f9c8a2f7bbca44aabe784 gb|KJ926582| PRGD_OTU001g_b1e47cd05f9f9c8a2f7bbca44aabe784, putative proteorhodopsin gene, partial cds. PRGD_OTU001g_b1e47cd05f9f9c8a2f7bbca44aabe784, putative proteorhodopsin gene, partial cds. KJ926582 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCAGTAAATAAAGCAAACTCTGGAATATTCTGGAGATTGCTACTTGGTTCAATAGTAATGTTAGTTGGAGGATACTTAGGAGAAGCAGGTTACATCAATTCTATGCTTGGTTTCGTTATTGGTATGGCTGGATGGATCTATATCTTGTATGAAGTATTTTCAGGTGAAGCAGGAAAAATGGCGGCAAAAAGTGGAAACAAAGCTCTTGTTACTGCATTTGGTGCTATGAGAATGATCGTTACAGTT LITVPLLMLEFYFVLAAVNKANSGIFWRLLLGSIVMLVGGYLGEAGYINSMLGFVIGMAGWIYILYEVFSGEAGKMAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---AATAAAGCAAACTCT---GGAATA------------------------------------TTCTGGAGA---TTGCTACTTGGTTCAATAGTAATGTTAGTTGGAGGATACTTAGGAGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATTCT------------------ATGCTTGGT---TTCGTTATTGGTATGGCTGGATGGATCTATATCTTGTATGAAGTA---------------TTT------TCA---GGTGAAGCAGGAAAAATGGCGGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCTATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LLLGSIVMLVGGYLGE---A------G--Y-----------I----------------------NS------MLG-FVIGMAGWIYILYEV-----F--S-GEAGKMAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11]_KJ926566 [IV-Alpha8-SAR11] PRGD_OTU001g_1d781fbb758c0c5fe65660e62b4bf7b3 gb|KJ926566| PRGD_OTU001g_1d781fbb758c0c5fe65660e62b4bf7b3, putative proteorhodopsin gene, partial cds. PRGD_OTU001g_1d781fbb758c0c5fe65660e62b4bf7b3, putative proteorhodopsin gene, partial cds. KJ926566 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCAGTAAATAAAGCAAACTCTGGAATATTCTGGAGATTGTTATTAGGATCAATAGTAATGCTAGTTGGAGGATATTTAGGAGAAGCTGGATACATCAACTCTATGCTTGGTTTCATTATCGGTATGGCAGGATGGATCTACATTCTTTATGAAGTATTTTCAGGCGAAGCAGGAAAAATGGCATCGAAAAGTGGAAACAAAGCTCTTGTTACTGCATTTGGTGCTATGAGAATGATCGTTACAGTA LITVPLLMLEFYFVLAAVNKANSGIFWRLLLGSIVMLVGGYLGEAGYINSMLGFIIGMAGWIYILYEVFSGEAGKMASKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTTGCAGCA---------GTA---AATAAAGCAAACTCT---GGAATA------------------------------------TTCTGGAGA---TTGTTATTAGGATCAATAGTAATGCTAGTTGGAGGATATTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACTCT------------------ATGCTTGGT---TTCATTATCGGTATGGCAGGATGGATCTACATTCTTTATGAAGTA---------------TTT------TCA---GGCGAAGCAGGAAAAATGGCATCGAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCTATG---AGAATGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-NKANS-GI------------FWR-LLLGSIVMLVGGYLGE---A------G--Y-----------I----------------------NS------MLG-FIIGMAGWIYILYEV-----F--S-GEAGKMASK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11]_KJ926573 [IV-Alpha8-SAR11] PRGD_OTU001g_5ce3c50cd9891abc2f2be8b0e6695e4a gb|KJ926573| PRGD_OTU001g_5ce3c50cd9891abc2f2be8b0e6695e4a, putative proteorhodopsin gene, partial cds. PRGD_OTU001g_5ce3c50cd9891abc2f2be8b0e6695e4a, putative proteorhodopsin gene, partial cds. KJ926573 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185) TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCAGTAGGTAAAGCAAATTCTGGAGTATTCTGGAGATTGTTATTAGGAACACTAGTAATGTTAATCGGTGGATACTTAGGAGAAGCAGGATATATCAACTCTACACTTGGTTTCGTAATCGGTATGGCTGGTTGGTTCTACATTCTTTATGAAGTATTCTCAGGCGAAGCAGGAAAAATGGCAGCAAAAAGTGGAAACAAAGCTCTTGTTACTGCATTTGGTGCTATGAGAATGATCGTTACAGTT LITVPLLMLEFYFVLAAVGKANSGVFWRLLLGTLVMLIGGYLGEAGYINSTLGFVIGMAGWFYILYEVFSGEAGKMAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTATTGATGTTAGAATTCTATTTTGTTCTAGCAGCA---------GTA---GGTAAAGCAAATTCT---GGAGTA------------------------------------TTCTGGAGA---TTGTTATTAGGAACACTAGTAATGTTAATCGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACTCT------------------ACACTTGGT---TTCGTAATCGGTATGGCTGGTTGGTTCTACATTCTTTATGAAGTA---------------TTC------TCA---GGCGAAGCAGGAAAAATGGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCTATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLAA---V-GKANS-GV------------FWR-LLLGTLVMLIGGYLGE---A------G--Y-----------I----------------------NS------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKMAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11]_KJ926567 [IV-Alpha8-SAR11] PRGD_OTU001g_2e63bf62950eec9ddea66039738b7d71 gb|KJ926567| PRGD_OTU001g_2e63bf62950eec9ddea66039738b7d71, putative proteorhodopsin gene, partial cds. PRGD_OTU001g_2e63bf62950eec9ddea66039738b7d71, putative proteorhodopsin gene, partial cds. KJ926567 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATCACAGTACCATTATTGATGTTAGAATTCTATTTTGTTCTAAAAGCAGTTGGTAAAGCAAATTCTGGAGTATTCTGGAGATTGTTACTTGGTACTTTGGTAATGCTAGTTGGAGGATACTTAGGAGAAGCAGGATACATCAACGCTACACTTGGTTTTGTAATCGGTATGGCCGGATGGTTCTACATTCTTTATGAAGTATTTTCAGGTGAAGCAGGAAAAATGGCAGCGAAAAGTGGAAACAAAGCTCTTGTTACTGCATTTGGTGCTATGAGAATGATCGTTACAGTT LITVPLLMLEFYFVLKAVGKANSGVFWRLLLGTLVMLVGGYLGEAGYINATLGFVIGMAGWFYILYEVFSGEAGKMAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTACCATTATTGATGTTAGAATTCTATTTTGTTCTAAAAGCA---------GTT---GGTAAAGCAAATTCT---GGAGTA------------------------------------TTCTGGAGA---TTGTTACTTGGTACTTTGGTAATGCTAGTTGGAGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTTGTAATCGGTATGGCCGGATGGTTCTACATTCTTTATGAAGTA---------------TTT------TCA---GGTGAAGCAGGAAAAATGGCAGCGAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCA---TTT---GGT---GCTATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLKA---V-GKANS-GV------------FWR-LLLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWFYILYEV-----F--S-GEAGKMAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11]_KJ926570 [IV-Alpha8-SAR11] PRGD_OTU001g_4e847445960434335b3ca6cd41724a72 gb|KJ926570| PRGD_OTU001g_4e847445960434335b3ca6cd41724a72, putative proteorhodopsin gene, partial cds. PRGD_OTU001g_4e847445960434335b3ca6cd41724a72, putative proteorhodopsin gene, partial cds. KJ926570 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) TTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCGGTAAATAAAGCTAATTCAGGAATTTTCTGGAGATTGATGCTTGGTACAATAGTAATGCTATTAGGTGGATACTTAGGAGAAGCAGGATACATCAATGCTACGCTTGGTTTTATAATCGGTATGGCTGGTTGGGTGTACATTCTTTATGAAGTATTTTCAGGTGAAGCTGGTAAAGCAGCAGCAAAAAGTGGAAACAAAGCTCTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTT LITVPLLMLEFYFVLSAVNKANSGIFWRLMLGTIVMLLGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCG---------GTA---AATAAAGCTAATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACAATAGTAATGCTATTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACGCTTGGT---TTTATAATCGGTATGGCTGGTTGGGTGTACATTCTTTATGAAGTA---------------TTT------TCA---GGTGAAGCTGGTAAAGCAGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKANS-GI------------FWR-LMLGTIVMLLGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11]_KJ926577 [IV-Alpha8-SAR11] PRGD_OTU001g_8c97aa8ef520728ca3a1a9d3046d9a45 gb|KJ926577| PRGD_OTU001g_8c97aa8ef520728ca3a1a9d3046d9a45, putative proteorhodopsin gene, partial cds. PRGD_OTU001g_8c97aa8ef520728ca3a1a9d3046d9a45, putative proteorhodopsin gene, partial cds. KJ926577 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) TTAATTACAGTACCACTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCAGTAAATAAAGCTAATTCAGGAATTTTCTGGAGATTGATGCTTGGTACAATAGTAATGCTATTAGGTGGATACTTAGGAGAAGCAGGATACATCAACGCTACGCTTGGTTTTATAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTTTCAGGTGAAGCTGGTAAAGCAGCAGCAAAAAGTGGAAACAAAGCTCTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTTACAGTT LITVPLLMLEFYFVLSAVNKANSGIFWRLMLGTIVMLLGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTACCACTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCA---------GTA---AATAAAGCTAATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACAATAGTAATGCTATTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACGCTTGGT---TTTATAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTT------TCA---GGTGAAGCTGGTAAAGCAGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKANS-GI------------FWR-LMLGTIVMLLGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11]_KJ926578 [IV-Alpha8-SAR11] PRGD_OTU001g_947002d3e8aca4c0311bfe311dd18e03 gb|KJ926578| PRGD_OTU001g_947002d3e8aca4c0311bfe311dd18e03, putative proteorhodopsin gene, partial cds. PRGD_OTU001g_947002d3e8aca4c0311bfe311dd18e03, putative proteorhodopsin gene, partial cds. KJ926578 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCAGTAAATAAAGCTAATTCAGGAATTTTCTGGAGATTGATGCTTGGTACAATAGTAATGCTATTAGGTGGATACTTAGGAGAAGCAGGATACATCAATGCTACGCTTGGTTTTATAATCGGTATGGCTGGATGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCTGGTAAAGCAGCAGCAAAAAGTGGAAACAAAGCTCTTGTTACTGCTTTTGGTGCAATGAGAATGATCGTTACTGTT LITVPLLMLEFYFVLSAVNKANSGIFWRLMLGTIVMLLGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCACTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCA---------GTA---AATAAAGCTAATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACAATAGTAATGCTATTAGGTGGATACTTAGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACGCTTGGT---TTTATAATCGGTATGGCTGGATGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCTGGTAAAGCAGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATCGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKANS-GI------------FWR-LMLGTIVMLLGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8-SAR11]_KJ926586 [IV-Alpha8-SAR11] PRGD_OTU001g_ed3f93c15061b051d7e6750bbb356c4d gb|KJ926586| PRGD_OTU001g_ed3f93c15061b051d7e6750bbb356c4d, putative proteorhodopsin gene, partial cds. PRGD_OTU001g_ed3f93c15061b051d7e6750bbb356c4d, putative proteorhodopsin gene, partial cds. KJ926586 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8/SAR11 C. Pelagibacter-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 SAR11 C. Pelagibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), English Channel (48.7717, -3.9683) CTAATTACAGTACCGCTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCAGTAAACAAAGCTAATTCAGGAATTTTCTGGAGATTGATGCTTGGTACATTGGTAATGCTAGTAGGTGGATACTTAGGAGAAGCTGGATACATCAACGCTACACTTGGTTTCATAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTATTCTCTGGTGAAGCAGGTAAAGCTGCAGCAAAAAGTGGAAACAAAGCTCTTGTTACTGCTTTTGGTGCAATGAGAATGATTGTTACTGTA LITVPLLMLEFYFVLSAVNKANSGIFWRLMLGTLVMLVGGYLGEAGYINATLGFIIGMAGWVYILYEVFSGEAGKAAAKSGNKALVTAFGAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTACCGCTACTAATGTTAGAATTCTATTTTGTTCTTTCAGCA---------GTA---AACAAAGCTAATTCA---GGAATT------------------------------------TTCTGGAGA---TTGATGCTTGGTACATTGGTAATGCTAGTAGGTGGATACTTAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTTGGT---TTCATAATCGGTATGGCTGGTTGGGTATACATTCTTTATGAAGTA---------------TTC------TCT---GGTGAAGCAGGTAAAGCTGCAGCAAAA------AGT---GGAAACAAAGCTCTT---GTT---ACT---GCT---TTT---GGT---GCAATG---AGAATGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMLEFYFVLSA---V-NKANS-GI------------FWR-LMLGTLVMLVGGYLGE---A------G--Y-----------I----------------------NA------TLG-FIIGMAGWVYILYEV-----F--S-GEAGKAAAK--S-GNKAL-V-T-A-F-G-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha8]_KJ929856 [IV-Alpha8] PRGD_OTU307_otuREP_1303470d4d5c465adcbbf7c4396bcf5b gb|KJ929856| PRGD_OTU307_otuREP_1303470d4d5c465adcbbf7c4396bcf5b, putative proteorhodopsin gene, partial cds. PRGD_OTU307_otuREP_1303470d4d5c465adcbbf7c4396bcf5b, putative proteorhodopsin gene, partial cds. KJ929856 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 8]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTATTAACTGTTCCTCTACAAATGGTAGAGTTCTACTTGATTCTTGCTGCTATCACTGCTGTAAGCGGTGGAGTATTCTGGCGTCTATTTATTGGTTCAGTTGTTATGCTTTTAGGTGGCTTCCTCGGAGAGGCGGGCTACATGAACGCAATGGCCGGATTCATCATAGGGATGGCAGGTTGGATATACATCCTTTATGAAGTATTCAAAGGTGAAGCAGCGCAAGTTAATGCAGCAAGCGCAAACGCTAGCTGTCAGAAAGCCTTTGGCGCAATGAAGATGATTGTAAGTGTT LLTVPLQMVEFYLILAAITAVSGGVFWRLFIGSVVMLLGGFLGEAGYMNAMAGFIIGMAGWIYILYEVFKGEAAQVNAASANASCQKAFGAMKMIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACTGTTCCTCTACAAATGGTAGAGTTCTACTTGATTCTTGCTGCT---------ATC---ACTGCTGTAAGCGGT---GGAGTA------------------------------------TTCTGGCGT---CTATTTATTGGTTCAGTTGTTATGCTTTTAGGTGGCTTCCTCGGAGAG---------GCG------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AACGCA------------------ATGGCCGGA---TTCATCATAGGGATGGCAGGTTGGATATACATCCTTTATGAAGTA---------------TTC------AAA---GGTGAAGCAGCGCAAGTTAATGCAGCA------AGC---GCAAACGCTAGCTGT---CAG---AAA---GCC---TTT---GGC---GCAATG---AAGATGATTGTAAGTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMVEFYLILAA---I-TAVSG-GV------------FWR-LFIGSVVMLLGGFLGE---A------G--Y-----------M----------------------NA------MAG-FIIGMAGWIYILYEV-----F--K-GEAAQVNAA--S-ANASC-Q-K-A-F-G-AM-KMIVSV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_KJ928484 [IV-Gamma5-SAR86c] PRGD_OTU038a_7fd7376d2c81baed6bc754349fb6f2c5 gb|KJ928484| PRGD_OTU038a_7fd7376d2c81baed6bc754349fb6f2c5, putative proteorhodopsin gene, partial cds. PRGD_OTU038a_7fd7376d2c81baed6bc754349fb6f2c5, putative proteorhodopsin gene, partial cds. KJ928484 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 01-juil-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683) TTACTAACTGTGCCTTTGTTAATTTGTGAATTCTATTTAATACTTGCTGCTGCAACAAATGTTGCTGCCGGATTATTTAAGAAACTACTAGGTGGTTCACTTGTTATGCTAGTTTTTGGTTACATGGGTGAAGCAGGAATTATGAACGCTTGGGGTGCATTCGTTATTGGGTGTCTAGCATGGGTATACATGATTTATGAGCTTTGGGCTGGAGAAGGAAAAGCTGCATGTAATACAGCAAGTCCTGCAGTTCAGTCAGCTTATAACACAATGATGTATATCATCATATTT LLTVPLLICEFYLILAAATNVAAGLFKKLLGGSLVMLVFGYMGEAGIMNAWGAFVIGCLAWVYMIYELWAGEGKAACNTASPAVQSAYNTMMYIIIF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTAACTGTGCCTTTGTTAATTTGTGAATTCTATTTAATACTTGCTGCT---------GCA---ACAAATGTTGCTGCC---GGATTA------------------------------------TTTAAGAAA---CTACTAGGTGGTTCACTTGTTATGCTAGTTTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------AACGCT------------------TGGGGTGCA---TTCGTTATTGGGTGTCTAGCATGGGTATACATGATTTATGAGCTT---------------TGG------GCT---GGAGAA---GGAAAAGCTGCATGTAAT------ACA---GCAAGTCCTGCAGTT---CAG---TCA---GCT---TAT---AAC---ACAATG---ATGTATATCATCATATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLICEFYLILAA---A-TNVAA-GL------------FKK-LLGGSLVMLVFGYMGE---A------G--I-----------M----------------------NA------WGA-FVIGCLAWVYMIYEL-----W--A-GE-GKAACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_KJ928489 [IV-Gamma5-SAR86c] PRGD_OTU038a_a57009fde83a1572107c4ed03099dff4 gb|KJ928489| PRGD_OTU038a_a57009fde83a1572107c4ed03099dff4, putative proteorhodopsin gene, partial cds. PRGD_OTU038a_a57009fde83a1572107c4ed03099dff4, putative proteorhodopsin gene, partial cds. KJ928489 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683) TTACTAACAGTTCCTTTATTAATATGTGAATTCTATTTAATTCTTGCTGCTGCAACTAATGTTGCTGCCGGATTATTTAAGAAACTACTAGTTGGTTCTCTTGTTATGCTAGTGTTTGGTTACATGGGTGAAGCAGGAATTATGAACGCTTGGGTTGCATTCATTATTGGGTGTCTAGCATGGGTATACATGATTTATGAGCTTTGGCTTGGAGAAGGAAAAGCTGCGTGTAATACAGCAAGTCCTGCAGTTCAGTCAGCTTACAACACAATGATGATGATCATCATCTTT LLTVPLLICEFYLILAAATNVAAGLFKKLLVGSLVMLVFGYMGEAGIMNAWVAFIIGCLAWVYMIYELWLGEGKAACNTASPAVQSAYNTMMMIIIF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTAACAGTTCCTTTATTAATATGTGAATTCTATTTAATTCTTGCTGCT---------GCA---ACTAATGTTGCTGCC---GGATTA------------------------------------TTTAAGAAA---CTACTAGTTGGTTCTCTTGTTATGCTAGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------AACGCT------------------TGGGTTGCA---TTCATTATTGGGTGTCTAGCATGGGTATACATGATTTATGAGCTT---------------TGG------CTT---GGAGAA---GGAAAAGCTGCGTGTAAT------ACA---GCAAGTCCTGCAGTT---CAG---TCA---GCT---TAC---AAC---ACAATG---ATGATGATCATCATCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLICEFYLILAA---A-TNVAA-GL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------NA------WVA-FIIGCLAWVYMIYEL-----W--L-GE-GKAACN--T-ASPAV-Q-S-A-Y-N-TM-MMIIIF-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_KJ928474 [IV-Gamma5-SAR86c] PRGD_OTU038a_otuREP_4982b329dbff830e3654f008e6884982 gb|KJ928474| PRGD_OTU038a_otuREP_4982b329dbff830e3654f008e6884982, putative proteorhodopsin gene, partial cds. PRGD_OTU038a_otuREP_4982b329dbff830e3654f008e6884982, putative proteorhodopsin gene, partial cds. KJ928474 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCTGCAACTAATGTTGCTGGATCATTATTTAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAGGCAGGAATTATGGCAGCTTGGCCTGCATTCATTGTTGGATGTTTAGCTTGGGTATACATGATTTATGAACTATGGGCTGGAGAAGGAAAATCTGCTTGTAATACTGCAAGTCCTGCTGTGCAATCAGCTTACAACACAATGATGTATATCATCATCTTT LLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIVGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTAACAGTTCCTTTATTAATATGTGAATTCTACTTAATTCTTGCTGCT---------GCA---ACTAATGTTGCTGGA---TCATTA------------------------------------TTTAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAG---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATTGTTGGATGTTTAGCTTGGGTATACATGATTTATGAACTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCTTGTAAT------ACT---GCAAGTCCTGCTGTG---CAA---TCA---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIVGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_KJ928495 [IV-Gamma5-SAR86c] PRGD_OTU038a_de6b7e84226f533cd9ce89de0cd40586 gb|KJ928495| PRGD_OTU038a_de6b7e84226f533cd9ce89de0cd40586, putative proteorhodopsin gene, partial cds. PRGD_OTU038a_de6b7e84226f533cd9ce89de0cd40586, putative proteorhodopsin gene, partial cds. KJ928495 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 01-juil-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTGCTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTAGCAGCAGCTACTAACGTTGCTGGTTCTTTATTCAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATTATGGCAGCCTGGCCTGCATTCATTATAGGATGTTTAGCATGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAGTCTGCATGTAACACTGCAAGTCCTGCAGTTCAGTCAGCTTACAACACAATGATGTATATCATCATCTTT LLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTAGCAGCA---------GCT---ACTAACGTTGCTGGT---TCTTTA------------------------------------TTCAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------GCAGCC------------------TGGCCTGCA---TTCATTATAGGATGTTTAGCATGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAGTCTGCATGTAAC------ACT---GCAAGTCCTGCAGTT---CAG---TCA---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_KJ928481 [IV-Gamma5-SAR86c] PRGD_OTU038a_69a30885ad407c44549f119375c5a61f gb|KJ928481| PRGD_OTU038a_69a30885ad407c44549f119375c5a61f, putative proteorhodopsin gene, partial cds. PRGD_OTU038a_69a30885ad407c44549f119375c5a61f, putative proteorhodopsin gene, partial cds. KJ928481 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTACTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTAGCAGCAGCTACTAACGTTGCTGGTTCTTTATTCAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCACAAATTATGGCAGCTTGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTGTACATGATTTATGAATTATGGGCTGGAGAAGGAAAGTCTGCATGTAACACTGCAAGTCCTGCAGTTCAGTCAGCTTACAACACAATGATGTATATCATCATCTTT LLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAQIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTAGCAGCA---------GCT---ACTAACGTTGCTGGT---TCTTTA------------------------------------TTCAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------CAA------ATT---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTGTACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAGTCTGCATGTAAC------ACT---GCAAGTCCTGCAGTT---CAG---TCA---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------Q--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_KJ928478 [IV-Gamma5-SAR86c] PRGD_OTU038a_45e35edb5c7afcb1feb42820ce014bee gb|KJ928478| PRGD_OTU038a_45e35edb5c7afcb1feb42820ce014bee, putative proteorhodopsin gene, partial cds. PRGD_OTU038a_45e35edb5c7afcb1feb42820ce014bee, putative proteorhodopsin gene, partial cds. KJ928478 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 01-juil-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTACTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTAGCAGCAGCTACTAACGTTGCTGGTTCTTTATTCAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATTATGGCAGCTTGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAGTCTGCATGTAACACTGCAAGTCCTGCAGTTCAGTCAGCTTACAACACAATGATGTATATCATCATCTTT LLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTAGCAGCA---------GCT---ACTAACGTTGCTGGT---TCTTTA------------------------------------TTCAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAGTCTGCATGTAAC------ACT---GCAAGTCCTGCAGTT---CAG---TCA---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_KJ928477 [IV-Gamma5-SAR86c] PRGD_OTU038a_1e4d381ab23c05fcab588dc3e0cdf7e1 gb|KJ928477| PRGD_OTU038a_1e4d381ab23c05fcab588dc3e0cdf7e1, putative proteorhodopsin gene, partial cds. PRGD_OTU038a_1e4d381ab23c05fcab588dc3e0cdf7e1, putative proteorhodopsin gene, partial cds. KJ928477 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 01-juil-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTACTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTAGCAGCAGCTACTAACGTTGCTGGTTCTTTATTCAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATTATGGCAGCCTGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAGCTTTGGGCTGGAGAAGGAAAGTCTGCATGTAATACTGCAAGTCCTGCAGTTCAGTCAGCTTACAACACAATGATGTATATCATCATCGTT LLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTAGCAGCA---------GCT---ACTAACGTTGCTGGT---TCTTTA------------------------------------TTCAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------GCAGCC------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAGCTT---------------TGG------GCT---GGAGAA---GGAAAGTCTGCATGTAAT------ACT---GCAAGTCCTGCAGTT---CAG---TCA---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_KJ928482 [IV-Gamma5-SAR86c] PRGD_OTU038a_77c932cb65d66859cbb5a8a78e8d469e gb|KJ928482| PRGD_OTU038a_77c932cb65d66859cbb5a8a78e8d469e, putative proteorhodopsin gene, partial cds. PRGD_OTU038a_77c932cb65d66859cbb5a8a78e8d469e, putative proteorhodopsin gene, partial cds. KJ928482 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 01-juil-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Mediterranean Sea (33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTACTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTAGCAGCAGCTACTAACGTTGCTGGTTCTTTATTCAAGAAATTACTAGTTGCTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCACAAATTATGGCAGCTTGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTATATGCTGGAGAAGGAAAATCTGCATGCAATACAGCAAGTCCTGCGGTTCAATCAGCTTACAACGCAATGATGATTATCATCGTCGTC LLTVPLLICEFYLILAAATNVAGSLFKKLLVASLVMLVFGYMGEAQIMAAWPAFIIGCLAWVYMIYELYAGEGKSACNTASPAVQSAYNAMMIIIVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTAGCAGCA---------GCT---ACTAACGTTGCTGGT---TCTTTA------------------------------------TTCAAGAAA---TTACTAGTTGCTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------CAA------ATT---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTA---------------TAT------GCT---GGAGAA---GGAAAATCTGCATGCAAT------ACA---GCAAGTCCTGCGGTT---CAA---TCA---GCT---TAC---AAC---GCAATG---ATGATTATCATCGTCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVASLVMLVFGYMGE---A------Q--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----Y--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-AM-MIIIVV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_KJ928494 [IV-Gamma5-SAR86c] PRGD_OTU038a_d50763ad9b2a2dc896ee6223037fd2cc gb|KJ928494| PRGD_OTU038a_d50763ad9b2a2dc896ee6223037fd2cc, putative proteorhodopsin gene, partial cds. PRGD_OTU038a_d50763ad9b2a2dc896ee6223037fd2cc, putative proteorhodopsin gene, partial cds. KJ928494 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) TTACTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTAGCAGCAGCTACTAACGTTGCTGGTTCTTTATTCAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATTATGGCAGCTTGGCCTGCATTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTATATGCTGGAGAAGGAAAATCTGCATGCAATACAGCAAGTCCTGCGGTTCAATCAGCTTACAACGCAATGATGACTATCATCGTCGTC LLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELYAGEGKSACNTASPAVQSAYNAMMTIIVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTAGCAGCA---------GCT---ACTAACGTTGCTGGT---TCTTTA------------------------------------TTCAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATTATTGGGTGTTTAGCTTGGGTATACATGATTTATGAACTA---------------TAT------GCT---GGAGAA---GGAAAATCTGCATGCAAT------ACA---GCAAGTCCTGCGGTT---CAA---TCA---GCT---TAC---AAC---GCAATG---ATGACTATCATCGTCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----Y--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-AM-MTIIVV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_KJ928490 [IV-Gamma5-SAR86c] PRGD_OTU038a_a62999521d8fc2816a7e5989b5308404 gb|KJ928490| PRGD_OTU038a_a62999521d8fc2816a7e5989b5308404, putative proteorhodopsin gene, partial cds. PRGD_OTU038a_a62999521d8fc2816a7e5989b5308404, putative proteorhodopsin gene, partial cds. KJ928490 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 01-juil-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) TTACTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTAGCAGCAGCTACTAACGTTGCTGGTTCTTTATTCAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATTATGGCAGCCTGGCCTGCATTCATTATTGGATGTTTAGCTTGGGTATACATGATTTATGAATTATATGCTGGAGAAGGAAAATCTGCATGCAATACAGCAAGTCCTGCGGTTCAATCAGCTTACAACGCAATGATGATTATCATCGTCGTC LLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELYAGEGKSACNTASPAVQSAYNAMMIIIVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTAGCAGCA---------GCT---ACTAACGTTGCTGGT---TCTTTA------------------------------------TTCAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------GCAGCC------------------TGGCCTGCA---TTCATTATTGGATGTTTAGCTTGGGTATACATGATTTATGAATTA---------------TAT------GCT---GGAGAA---GGAAAATCTGCATGCAAT------ACA---GCAAGTCCTGCGGTT---CAA---TCA---GCT---TAC---AAC---GCAATG---ATGATTATCATCGTCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----Y--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-AM-MIIIVV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_KJ928487 [IV-Gamma5-SAR86c] PRGD_OTU038a_9c4a1e406c532b5c6a6f9217eb1421ab gb|KJ928487| PRGD_OTU038a_9c4a1e406c532b5c6a6f9217eb1421ab, putative proteorhodopsin gene, partial cds. PRGD_OTU038a_9c4a1e406c532b5c6a6f9217eb1421ab, putative proteorhodopsin gene, partial cds. KJ928487 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -33.9602, -73.3769), Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) CTATTAACAGTGCCTTTACTAATATGTGAGTTCTATTTAATACTTGCCGCAGCTACTAATGTTGCTGGTTCATTATTTAAGAAATTGCTAGTTGGTTCTCTTGTTATGCTTGTGTTCGGTTACATGGGTGAAGCAGGAATAATGGCAGCTTGGCCTGCATTCATCATTGGGTGTTTAGCATGGGTATATATGATTTATGAGCTATGGGCTGGTGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCTGTACAGTCAGCTTACAACACTATGATGTATATTATCATTGTT LLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACAGTGCCTTTACTAATATGTGAGTTCTATTTAATACTTGCCGCA---------GCT---ACTAATGTTGCTGGT---TCATTA------------------------------------TTTAAGAAA---TTGCTAGTTGGTTCTCTTGTTATGCTTGTGTTCGGTTACATGGGTGAA---------GCA------------------GGA------ATA---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATCATTGGGTGTTTAGCATGGGTATATATGATTTATGAGCTA---------------TGG------GCT---GGTGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCTGTA---CAG---TCA---GCT---TAC---AAC---ACTATG---ATGTATATTATCATTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_KJ928485 [IV-Gamma5-SAR86c] PRGD_OTU038a_8278c6516cd35f5265f2c0fee1f55f25 gb|KJ928485| PRGD_OTU038a_8278c6516cd35f5265f2c0fee1f55f25, putative proteorhodopsin gene, partial cds. PRGD_OTU038a_8278c6516cd35f5265f2c0fee1f55f25, putative proteorhodopsin gene, partial cds. KJ928485 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTATTAACTGTGCCTTTACTAATATGTGAGTTCTATCTGATACTTGCTGCAGCTACTAATGTTGCTGGTTCATTATTTAAGAAATTGCTAGTTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATAATGGCAGCTTGGCCTGCATTCATCATTGGATGTTTAGCATGGGTATATATGATTTATGAACTATGGGCTGGTGAAGGAAAATCTGCATGCAATACTGCAAGTCCTGCTGTACAGTCAGCTTACAACACAATGATGTATATCATCATCGTT LLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACTGTGCCTTTACTAATATGTGAGTTCTATCTGATACTTGCTGCA---------GCT---ACTAATGTTGCTGGT---TCATTA------------------------------------TTTAAGAAA---TTGCTAGTTGGTTCTCTTGTGATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATA---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATCATTGGATGTTTAGCATGGGTATATATGATTTATGAACTA---------------TGG------GCT---GGTGAA---GGAAAATCTGCATGCAAT------ACT---GCAAGTCCTGCTGTA---CAG---TCA---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_KJ928491 [IV-Gamma5-SAR86c] PRGD_OTU038a_a9ddad4e200d6f5b2fa06b18c8191a12 gb|KJ928491| PRGD_OTU038a_a9ddad4e200d6f5b2fa06b18c8191a12, putative proteorhodopsin gene, partial cds. PRGD_OTU038a_a9ddad4e200d6f5b2fa06b18c8191a12, putative proteorhodopsin gene, partial cds. KJ928491 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTACTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTTGCAGCAGCTACTAACGTTGCTGGTTCTTTATTTAAGAAATTGCTACTTGGTTCCCTTGTAATGCTTGTGTTTGGGTACTTAGGTGAAGCTAGCCTCTTAAATGCATGGATTGCATTCTTAGTTGGTTGTGCTGCATGGGTATACATGATTTATATACTATGGGCTGGAGAAGGAAAGTCTGCATGTAATACTGCAAGTCCTGCAGTTCAGTCAGCTTACAACACAATGATGTATATCATCATCTTT LLTVPLLICEFYLILAAATNVAGSLFKKLLLGSLVMLVFGYLGEASLLNAWIAFLVGCAAWVYMIYILWAGEGKSACNTASPAVQSAYNTMMYIIIF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTTGCAGCA---------GCT---ACTAACGTTGCTGGT---TCTTTA------------------------------------TTTAAGAAA---TTGCTACTTGGTTCCCTTGTAATGCTTGTGTTTGGGTACTTAGGTGAA---------GCT------------------AGC------CTC---------------------------------TTA------------------------------------------------------------------AATGCA------------------TGGATTGCA---TTCTTAGTTGGTTGTGCTGCATGGGTATACATGATTTATATACTA---------------TGG------GCT---GGAGAA---GGAAAGTCTGCATGTAAT------ACT---GCAAGTCCTGCAGTT---CAG---TCA---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLLGSLVMLVFGYLGE---A------S--L-----------L----------------------NA------WIA-FLVGCAAWVYMIYIL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_KJ928475 [IV-Gamma5-SAR86c] PRGD_OTU038a_091bb4253b858daf12132bf14c901c4c gb|KJ928475| PRGD_OTU038a_091bb4253b858daf12132bf14c901c4c, putative proteorhodopsin gene, partial cds. PRGD_OTU038a_091bb4253b858daf12132bf14c901c4c, putative proteorhodopsin gene, partial cds. KJ928475 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45; -33.28, 45.35) TTACTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTAGCAGCAGCTACTAACGTTGCTGGTTCTTTATTTAAGAAATTGCTACTTGGTTCTCTTGTTATGCTTGTGTTTGGGTACTTAGGTGAAGCTAGCCTCTTAAATGCATGGATTGCATTCTTAGTTGGTTGTGCTGCATGGGTATACATGATTTATATACTATGGGCTGGAGAAGGAAAGTCTGCATGTAATACTGCAAGTCCTGCAGTTCAGTCAGCTTACAACACAATGATGTATATCATCATCTTT LLTVPLLICEFYLILAAATNVAGSLFKKLLLGSLVMLVFGYLGEASLLNAWIAFLVGCAAWVYMIYILWAGEGKSACNTASPAVQSAYNTMMYIIIF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTAGCAGCA---------GCT---ACTAACGTTGCTGGT---TCTTTA------------------------------------TTTAAGAAA---TTGCTACTTGGTTCTCTTGTTATGCTTGTGTTTGGGTACTTAGGTGAA---------GCT------------------AGC------CTC---------------------------------TTA------------------------------------------------------------------AATGCA------------------TGGATTGCA---TTCTTAGTTGGTTGTGCTGCATGGGTATACATGATTTATATACTA---------------TGG------GCT---GGAGAA---GGAAAGTCTGCATGTAAT------ACT---GCAAGTCCTGCAGTT---CAG---TCA---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLLGSLVMLVFGYLGE---A------S--L-----------L----------------------NA------WIA-FLVGCAAWVYMIYIL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_KJ928479 [IV-Gamma5-SAR86c] PRGD_OTU038a_658609b2d31fd15d54de40224b1b809a gb|KJ928479| PRGD_OTU038a_658609b2d31fd15d54de40224b1b809a, putative proteorhodopsin gene, partial cds. PRGD_OTU038a_658609b2d31fd15d54de40224b1b809a, putative proteorhodopsin gene, partial cds. KJ928479 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) TTACTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTAGCAGCAGCTACTAACGTTGCTGGTTCTTTATTCAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGGTACTTAGGTGAAGCTAGCCTCTTAAATGCATGGATTGCATTCTTAGTTGGTTGTGCTGCATGGGTATACATGATTTATATACTATGGGCTGGAGAAGGAAAGTCTGCATGTAACACTGCAAGTCCTGCAGTTCAGTCAGCTTACAACACAATGATGTATATCATCATCTTT LLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYLGEASLLNAWIAFLVGCAAWVYMIYILWAGEGKSACNTASPAVQSAYNTMMYIIIF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTAGCAGCA---------GCT---ACTAACGTTGCTGGT---TCTTTA------------------------------------TTCAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGGTACTTAGGTGAA---------GCT------------------AGC------CTC---------------------------------TTA------------------------------------------------------------------AATGCA------------------TGGATTGCA---TTCTTAGTTGGTTGTGCTGCATGGGTATACATGATTTATATACTA---------------TGG------GCT---GGAGAA---GGAAAGTCTGCATGTAAC------ACT---GCAAGTCCTGCAGTT---CAG---TCA---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYLGE---A------S--L-----------L----------------------NA------WIA-FLVGCAAWVYMIYIL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_KJ928496 [IV-Gamma5-SAR86c] PRGD_OTU038a_e73ee128daae51be30e32b268ef3e488 gb|KJ928496| PRGD_OTU038a_e73ee128daae51be30e32b268ef3e488, putative proteorhodopsin gene, partial cds. PRGD_OTU038a_e73ee128daae51be30e32b268ef3e488, putative proteorhodopsin gene, partial cds. KJ928496 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683) TTACTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTAGCAGCAGCTACTAACGTTGCTGGTTCTTTATTCAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACTTAGGTGAAGCTAGCCTCTTAAATGCATGGATTGCATTCTTATTTGGTTGTGCTGCATGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAGTCTGCATGTAACACTGCAAGTCCTGCAGTTCAGTCAGCTTACAACACAATGATGTATATCATCATCTTT LLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYLGEASLLNAWIAFLFGCAAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTAGCAGCA---------GCT---ACTAACGTTGCTGGT---TCTTTA------------------------------------TTCAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACTTAGGTGAA---------GCT------------------AGC------CTC---------------------------------TTA------------------------------------------------------------------AATGCA------------------TGGATTGCA---TTCTTATTTGGTTGTGCTGCATGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAGTCTGCATGTAAC------ACT---GCAAGTCCTGCAGTT---CAG---TCA---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYLGE---A------S--L-----------L----------------------NA------WIA-FLFGCAAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_KJ928483 [IV-Gamma5-SAR86c] PRGD_OTU038a_7cec8ce20a4883f4835ba21c54cb9a1e gb|KJ928483| PRGD_OTU038a_7cec8ce20a4883f4835ba21c54cb9a1e, putative proteorhodopsin gene, partial cds. PRGD_OTU038a_7cec8ce20a4883f4835ba21c54cb9a1e, putative proteorhodopsin gene, partial cds. KJ928483 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTACTAACCGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTTGCAGCAGCTACTAACGTTGCTGGTTCTTTATTTAGGAAATTACTGGTTGGCTCTCTTGTTATGCTTATTTTCGGTTACATGGGTGAAGCAAACCTCATGAATGCATGGCTTGCATTCGGAGTTGGTTGTGGAGCATGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCAGTTCAATCTGCTTACAACACAATGATGTATATCATCATCTTT LLTVPLLICEFYLILAAATNVAGSLFRKLLVGSLVMLIFGYMGEANLMNAWLAFGVGCGAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTAACCGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTTGCAGCA---------GCT---ACTAACGTTGCTGGT---TCTTTA------------------------------------TTTAGGAAA---TTACTGGTTGGCTCTCTTGTTATGCTTATTTTCGGTTACATGGGTGAA---------GCA------------------AAC------CTC---------------------------------ATG------------------------------------------------------------------AATGCA------------------TGGCTTGCA---TTCGGAGTTGGTTGTGGAGCATGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCAGTT---CAA---TCT---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FRK-LLVGSLVMLIFGYMGE---A------N--L-----------M----------------------NA------WLA-FGVGCGAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_KJ928492 [IV-Gamma5-SAR86c] PRGD_OTU038a_aff38f38d629c6022b505f2957a136d7 gb|KJ928492| PRGD_OTU038a_aff38f38d629c6022b505f2957a136d7, putative proteorhodopsin gene, partial cds. PRGD_OTU038a_aff38f38d629c6022b505f2957a136d7, putative proteorhodopsin gene, partial cds. KJ928492 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTACTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTAGCAGCAGCTACTAACGTTGCTGGTTCTTTATTCAAGAAATTACTAGTTGCTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAAGCCTCATGAATGCTTGGCTTGCATTCGGAGTTGGTTGTGCAGCATGGGTATACATGATTTATGAACTATATGCTGGAGAAGGAAAATCTGCATGCAATACAGCAAGTCCTGCGGTTCAATCAGCTTACAACGCAATGATGATTATCATCGTCGTC LLTVPLLICEFYLILAAATNVAGSLFKKLLVASLVMLVFGYMGEASLMNAWLAFGVGCAAWVYMIYELYAGEGKSACNTASPAVQSAYNAMMIIIVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTAGCAGCA---------GCT---ACTAACGTTGCTGGT---TCTTTA------------------------------------TTCAAGAAA---TTACTAGTTGCTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------AGC------CTC---------------------------------ATG------------------------------------------------------------------AATGCT------------------TGGCTTGCA---TTCGGAGTTGGTTGTGCAGCATGGGTATACATGATTTATGAACTA---------------TAT------GCT---GGAGAA---GGAAAATCTGCATGCAAT------ACA---GCAAGTCCTGCGGTT---CAA---TCA---GCT---TAC---AAC---GCAATG---ATGATTATCATCGTCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVASLVMLVFGYMGE---A------S--L-----------M----------------------NA------WLA-FGVGCAAWVYMIYEL-----Y--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-AM-MIIIVV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_KJ928493 [IV-Gamma5-SAR86c] PRGD_OTU038a_d0dedc5976a2e91bd29422c755443fe8 gb|KJ928493| PRGD_OTU038a_d0dedc5976a2e91bd29422c755443fe8, putative proteorhodopsin gene, partial cds. PRGD_OTU038a_d0dedc5976a2e91bd29422c755443fe8, putative proteorhodopsin gene, partial cds. KJ928493 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -33.28, 45.35) TTACTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTAGCAGCAGCTACTAACGTTGCTGGTTCTTTATTCAAGAAATTACTAGGTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATTATGAACGCTTGGGGTGCATTCGTTATTGGGTGTCTAGCATGGGTATACATGATTTATGAGCTTTGGGCTGGAGAAGGAAAGTCTGCATGTAACACTGCAAGTCCTGCAGTTCAGTCAGCTTACAACACAATGATGTATATCATCATCTTT LLTVPLLICEFYLILAAATNVAGSLFKKLLGGSLVMLVFGYMGEAGIMNAWGAFVIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTAGCAGCA---------GCT---ACTAACGTTGCTGGT---TCTTTA------------------------------------TTCAAGAAA---TTACTAGGTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------AACGCT------------------TGGGGTGCA---TTCGTTATTGGGTGTCTAGCATGGGTATACATGATTTATGAGCTT---------------TGG------GCT---GGAGAA---GGAAAGTCTGCATGTAAC------ACT---GCAAGTCCTGCAGTT---CAG---TCA---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLGGSLVMLVFGYMGE---A------G--I-----------M----------------------NA------WGA-FVIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_KJ928497 [IV-Gamma5-SAR86c] PRGD_OTU038a_fec5d31e985fef8034ff5cbb6d7de78d gb|KJ928497| PRGD_OTU038a_fec5d31e985fef8034ff5cbb6d7de78d, putative proteorhodopsin gene, partial cds. PRGD_OTU038a_fec5d31e985fef8034ff5cbb6d7de78d, putative proteorhodopsin gene, partial cds. KJ928497 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTACTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTAGCAGCAGCTACTAACGTTGCTGGTTCTTTATTCAAGAAATTACTAGGTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATTATGAACGCTTGGGGTGCATTCGTTATTGGGTGTCTAGCATGGGTATACATGATTTATGAGCTTTGGGCTGGAGAAGGAAAATCTGCATGTAATACTGCAAGTCCTGCAGTTCAGTCAGCTTACAACACAATGATGTATATTATCATCTTT LLTVPLLICEFYLILAAATNVAGSLFKKLLGGSLVMLVFGYMGEAGIMNAWGAFVIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTAGCAGCA---------GCT---ACTAACGTTGCTGGT---TCTTTA------------------------------------TTCAAGAAA---TTACTAGGTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------AACGCT------------------TGGGGTGCA---TTCGTTATTGGGTGTCTAGCATGGGTATACATGATTTATGAGCTT---------------TGG------GCT---GGAGAA---GGAAAATCTGCATGTAAT------ACT---GCAAGTCCTGCAGTT---CAG---TCA---GCT---TAC---AAC---ACAATG---ATGTATATTATCATCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLGGSLVMLVFGYMGE---A------G--I-----------M----------------------NA------WGA-FVIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_KJ928488 [IV-Gamma5-SAR86c] PRGD_OTU038a_a028574e5a9bf76063c6bb719c1bed61 gb|KJ928488| PRGD_OTU038a_a028574e5a9bf76063c6bb719c1bed61, putative proteorhodopsin gene, partial cds. PRGD_OTU038a_a028574e5a9bf76063c6bb719c1bed61, putative proteorhodopsin gene, partial cds. KJ928488 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTACTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTAGCAGCAGCTACTAATGTTGCTGGTTCTTTATTCAAAAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATTATGAACGCTTGGGGTGCATTCGTTATTGGGTGTCTAGCATGGGTATACATGATTTATGAGCTTTGGGCTGGAGAAGGAAAGTCTGCATGTAATACTGCAAGTCCTGCAGTTCAGTCAGCTTACAACACAATGATGTATATCATCATCTTT LLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMNAWGAFVIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTAGCAGCA---------GCT---ACTAATGTTGCTGGT---TCTTTA------------------------------------TTCAAAAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------AACGCT------------------TGGGGTGCA---TTCGTTATTGGGTGTCTAGCATGGGTATACATGATTTATGAGCTT---------------TGG------GCT---GGAGAA---GGAAAGTCTGCATGTAAT------ACT---GCAAGTCCTGCAGTT---CAG---TCA---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------NA------WGA-FVIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_KJ928486 [IV-Gamma5-SAR86c] PRGD_OTU038a_96760986ed2f086ba32d247f0bc2f2c6 gb|KJ928486| PRGD_OTU038a_96760986ed2f086ba32d247f0bc2f2c6, putative proteorhodopsin gene, partial cds. PRGD_OTU038a_96760986ed2f086ba32d247f0bc2f2c6, putative proteorhodopsin gene, partial cds. KJ928486 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-33.28, 45.35) TTACTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTAGCAGCAGCTACTAACGTTGCTGGTTCTTTATTCAAGAAATTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATTATGGCAGCCTGGCCTGCATTCATTATAGGATGTTTAGCATGGGTATACATGATTTATGAATTATGGGCTGGAGAAGGAAAGTCTGCATGTAATACTGCAAGTCCTGCAGTTCAATCTGCTTACAACACAATGATGTATATCATCATCTTT LLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTAACTGTGCCTTTACTAATTTGTGAGTTCTACTTAATACTAGCAGCA---------GCT---ACTAACGTTGCTGGT---TCTTTA------------------------------------TTCAAGAAA---TTACTAGTTGGTTCTCTTGTTATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------GCAGCC------------------TGGCCTGCA---TTCATTATAGGATGTTTAGCATGGGTATACATGATTTATGAATTA---------------TGG------GCT---GGAGAA---GGAAAGTCTGCATGTAAT------ACT---GCAAGTCCTGCAGTT---CAA---TCT---GCT---TAC---AAC---ACAATG---ATGTATATCATCATCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWVYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIIF-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_KJ928480 [IV-Gamma5-SAR86c] PRGD_OTU038a_673801f86ee53c34005a9e240100ccbc gb|KJ928480| PRGD_OTU038a_673801f86ee53c34005a9e240100ccbc, putative proteorhodopsin gene, partial cds. PRGD_OTU038a_673801f86ee53c34005a9e240100ccbc, putative proteorhodopsin gene, partial cds. KJ928480 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), Indian Ocean (-35.05, 23.73) TTACTAACAGTGCCATTATTAATAGTTGAATTTTACTTAATTCTTGCAGCTGCAACTAATGTTGCTGGTTCACTATTTAAAAAGCTCTTAATAGGTTCTATTGTTATGCTTGTATTTGGTTATATGGGTGAAGCAGGAATCATGGCAGCTTGGCCTGCATTCATTCTTGGGTGCTTAGCTTGGTTCTACATGATATATGAACTATGGGCAGGTGAAGGTAAGTCTGCATGCAATACTGCAAGTCCAGCTGTTCAATCAGCATACAACACAATGATGTATATTATTATCATT LLTVPLLIVEFYLILAAATNVAGSLFKKLLIGSIVMLVFGYMGEAGIMAAWPAFILGCLAWFYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIII ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTAACAGTGCCATTATTAATAGTTGAATTTTACTTAATTCTTGCAGCT---------GCA---ACTAATGTTGCTGGT---TCACTA------------------------------------TTTAAAAAG---CTCTTAATAGGTTCTATTGTTATGCTTGTATTTGGTTATATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCAGCT------------------TGGCCTGCA---TTCATTCTTGGGTGCTTAGCTTGGTTCTACATGATATATGAACTA---------------TGG------GCA---GGTGAA---GGTAAGTCTGCATGCAAT------ACT---GCAAGTCCAGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGTATATTATTATCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIVEFYLILAA---A-TNVAG-SL------------FKK-LLIGSIVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FILGCLAWFYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIII-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86c]_KJ928476 [IV-Gamma5-SAR86c] PRGD_OTU038a_18a5c3957d0c0b5f652cfa673af97216 gb|KJ928476| PRGD_OTU038a_18a5c3957d0c0b5f652cfa673af97216, putative proteorhodopsin gene, partial cds. PRGD_OTU038a_18a5c3957d0c0b5f652cfa673af97216, putative proteorhodopsin gene, partial cds. KJ928476 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_C-II-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_C-II-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTATTAACAGTTCCATTATTAATATGTGAATTTTACTTAATACTTGCAGCTGCTACAAACGTTGCTGGTTCTTTATTTAAAAAGCTATTAGTTGGTTCTCTTGTAATGCTTGTGTTTGGTTACATGGGTGAAGCAGGAATCATGGCGGCTTGGCCTGCATTCATTATTGGGTGCTTAGCTTGGTTCTACATGATTTATGAGCTATGGGCTGGTGAAGGAAAGTCTGCTTGTAATACTGCAAGTCCAGCTGTTCAATCAGCATACAACACAATGATGTATATTATTATCATT LLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWFYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIII ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACAGTTCCATTATTAATATGTGAATTTTACTTAATACTTGCAGCT---------GCT---ACAAACGTTGCTGGT---TCTTTA------------------------------------TTTAAAAAG---CTATTAGTTGGTTCTCTTGTAATGCTTGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------ATC---------------------------------ATG------------------------------------------------------------------GCGGCT------------------TGGCCTGCA---TTCATTATTGGGTGCTTAGCTTGGTTCTACATGATTTATGAGCTA---------------TGG------GCT---GGTGAA---GGAAAGTCTGCTTGTAAT------ACT---GCAAGTCCAGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGTATATTATTATCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLVGSLVMLVFGYMGE---A------G--I-----------M----------------------AA------WPA-FIIGCLAWFYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIII-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5]_KJ928498 [IV-Gamma5] PRGD_OTU038b_otuREP_81d6001f3725399a9285f757b808569c gb|KJ928498| PRGD_OTU038b_otuREP_81d6001f3725399a9285f757b808569c, putative proteorhodopsin gene, partial cds. PRGD_OTU038b_otuREP_81d6001f3725399a9285f757b808569c, putative proteorhodopsin gene, partial cds. KJ928498 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419) TTATTAACGGTTCCCTTATTAATATGTGAATTCTATTTAATACTTGCAGCAGCTACAAATGTTGCTGGCTCATTATTTAAGAAATTGCTTGCTGGATCTTTAGTAATGCTAATTTTTGGATACCTAGGTGAAGCAGGAATTATGGCTGCATTACCAGCATTTATCATCGGATGTCTTGCATGGGTGTATATGATTTACGAGCTATGGTTCGGCGAGGGAAAAGCGGCTAGCAATACTGCAAGCCCTGCTGTTCAATCAGCATACAACGCCATGATGTGGATTATTATCGTA LLTVPLLICEFYLILAAATNVAGSLFKKLLAGSLVMLIFGYLGEAGIMAALPAFIIGCLAWVYMIYELWFGEGKAASNTASPAVQSAYNAMMWIIIV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACGGTTCCCTTATTAATATGTGAATTCTATTTAATACTTGCAGCA---------GCT---ACAAATGTTGCTGGC---TCATTA------------------------------------TTTAAGAAA---TTGCTTGCTGGATCTTTAGTAATGCTAATTTTTGGATACCTAGGTGAA---------GCA------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TTACCAGCA---TTTATCATCGGATGTCTTGCATGGGTGTATATGATTTACGAGCTA---------------TGG------TTC---GGCGAG---GGAAAAGCGGCTAGCAAT------ACT---GCAAGCCCTGCTGTT---CAA---TCA---GCA---TAC---AAC---GCCATG---ATGTGGATTATTATCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLICEFYLILAA---A-TNVAG-SL------------FKK-LLAGSLVMLIFGYLGE---A------G--I-----------M----------------------AA------LPA-FIIGCLAWVYMIYEL-----W--F-GE-GKAASN--T-ASPAV-Q-S-A-Y-N-AM-MWIIIV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5]_KJ929682 [IV-Gamma5] PRGD_OTU193_otuREP_c7b77458cff9de36114ce54ec9efcfd9 gb|KJ929682| PRGD_OTU193_otuREP_c7b77458cff9de36114ce54ec9efcfd9, putative proteorhodopsin gene, partial cds. PRGD_OTU193_otuREP_c7b77458cff9de36114ce54ec9efcfd9, putative proteorhodopsin gene, partial cds. KJ929682 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) TTACTAACAGTACCATTATTAATAGTTGAGTTTTACTTAATTCTTGCAGCTGCTACCAATGTTGCTGGTTCTTTATTTAAGAAACTGCTAATTGGTTCAATAGTTATGTTAGTTGCAGGATACTTAGGTGAAGCTGGAGTTTGGCCAGCAATGCCAGCATTTTTACTTGGAATGGCGGCTTGGTTATATATGATCTATGAATTGTGGGCTGGAGAAGGTAAATCAGCTTGTAATACTGCGAGTCCAGCTGTTCAATCAGCATACAACACAATGATGTACATTATCATTATT LLTVPLLIVEFYLILAAATNVAGSLFKKLLIGSIVMLVAGYLGEAGVWPAMPAFLLGMAAWLYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIII ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTAACAGTACCATTATTAATAGTTGAGTTTTACTTAATTCTTGCAGCT---------GCT---ACCAATGTTGCTGGT---TCTTTA------------------------------------TTTAAGAAA---CTGCTAATTGGTTCAATAGTTATGTTAGTTGCAGGATACTTAGGTGAA---------GCT------------------GGA------GTT---------------------------------TGG------------------------------------------------------------------CCAGCA------------------ATGCCAGCA---TTTTTACTTGGAATGGCGGCTTGGTTATATATGATCTATGAATTG---------------TGG------GCT---GGAGAA---GGTAAATCAGCTTGTAAT------ACT---GCGAGTCCAGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGTACATTATCATTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIVEFYLILAA---A-TNVAG-SL------------FKK-LLIGSIVMLVAGYLGE---A------G--V-----------W----------------------PA------MPA-FLLGMAAWLYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIII-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5]_KJ929683 [IV-Gamma5] PRGD_OTU193_df8213e6fdb1a1beb0df221194a492ce gb|KJ929683| PRGD_OTU193_df8213e6fdb1a1beb0df221194a492ce, putative proteorhodopsin gene, partial cds. PRGD_OTU193_df8213e6fdb1a1beb0df221194a492ce, putative proteorhodopsin gene, partial cds. KJ929683 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTACTAACAGTACCATTATTAATAGTTGAGTTTTACTTAATTCTTGCAGCTGCTACCAATGTTGCTGGTTCTTTATTTAAGAAACTGCTAGTTGGTTCAATAGTTATGTTAGTTGCAGGATATCTAGGTGAAGCTGGAGTTTGGCCAGCAATGCCAGCATTCTTACTTGGAATGGCGGCTTGGATATATATGATCTATGAATTGTGGGCTGGAGAAGGTAAATCAGCTTGTAATACTGCGAGTCCAGCTGTTCAATCAGCATACAACACAATGATGTACATTATCATTATT LLTVPLLIVEFYLILAAATNVAGSLFKKLLVGSIVMLVAGYLGEAGVWPAMPAFLLGMAAWIYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIII ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTAACAGTACCATTATTAATAGTTGAGTTTTACTTAATTCTTGCAGCT---------GCT---ACCAATGTTGCTGGT---TCTTTA------------------------------------TTTAAGAAA---CTGCTAGTTGGTTCAATAGTTATGTTAGTTGCAGGATATCTAGGTGAA---------GCT------------------GGA------GTT---------------------------------TGG------------------------------------------------------------------CCAGCA------------------ATGCCAGCA---TTCTTACTTGGAATGGCGGCTTGGATATATATGATCTATGAATTG---------------TGG------GCT---GGAGAA---GGTAAATCAGCTTGTAAT------ACT---GCGAGTCCAGCTGTT---CAA---TCA---GCA---TAC---AAC---ACAATG---ATGTACATTATCATTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIVEFYLILAA---A-TNVAG-SL------------FKK-LLVGSIVMLVAGYLGE---A------G--V-----------W----------------------PA------MPA-FLLGMAAWIYMIYEL-----W--A-GE-GKSACN--T-ASPAV-Q-S-A-Y-N-TM-MYIIII-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86b]_KJ929270 [IV-Gamma5-SAR86b] PRGD_OTU096_4d03341e308c31f7e33daa988e3e92ee gb|KJ929270| PRGD_OTU096_4d03341e308c31f7e33daa988e3e92ee, putative proteorhodopsin gene, partial cds. PRGD_OTU096_4d03341e308c31f7e33daa988e3e92ee, putative proteorhodopsin gene, partial cds. KJ929270 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTGCTAACTGTTCCATTACTAATGGTTGAGTTCTACTTAATTCTTGCAGCTTGCACAAATGTTGCGGGCTCATTATTCAAAAAACTACTAGGTGGTTCGCTTGTAATGCTTATTGCAGGATATATGGGTGAGTCTGGAAGTCTTCCAGTATTGCCTGCATTCATTGTTGGGTGCCTAGCATGGTTCTACATGATTTATGAACTATATGCTGGTGAAGGTAAGGCTGCAGTTACTACTGCTAGTCCTGCTGTTATGTCTGCATACAATACTATGATGTTGATTATCGTAGTA LLTVPLLMVEFYLILAACTNVAGSLFKKLLGGSLVMLIAGYMGESGSLPVLPAFIVGCLAWFYMIYELYAGEGKAAVTTASPAVMSAYNTMMLIIVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTAACTGTTCCATTACTAATGGTTGAGTTCTACTTAATTCTTGCAGCT---------TGC---ACAAATGTTGCGGGC---TCATTA------------------------------------TTCAAAAAA---CTACTAGGTGGTTCGCTTGTAATGCTTATTGCAGGATATATGGGTGAG---------TCT------------------GGA------AGT---------------------------------CTT------------------------------------------------------------------CCAGTA------------------TTGCCTGCA---TTCATTGTTGGGTGCCTAGCATGGTTCTACATGATTTATGAACTA---------------TAT------GCT---GGTGAA---GGTAAGGCTGCAGTTACT------ACT---GCTAGTCCTGCTGTT---ATG---TCT---GCA---TAC---AAT---ACTATG---ATGTTGATTATCGTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLILAA---C-TNVAG-SL------------FKK-LLGGSLVMLIAGYMGE---S------G--S-----------L----------------------PV------LPA-FIVGCLAWFYMIYEL-----Y--A-GE-GKAAVT--T-ASPAV-M-S-A-Y-N-TM-MLIIVV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86b]_KJ929274 [IV-Gamma5-SAR86b] PRGD_OTU096_ecf72adaef047460e7e4f360d10c1148 gb|KJ929274| PRGD_OTU096_ecf72adaef047460e7e4f360d10c1148, putative proteorhodopsin gene, partial cds. PRGD_OTU096_ecf72adaef047460e7e4f360d10c1148, putative proteorhodopsin gene, partial cds. KJ929274 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) TTGCTAACTGTTCCATTACTAATGGTTGAGTTCTACTTAATTCTTGCAGCTTGCACAAATGTTGCGGGCTCATTATTTAAGAAACTACTAGGTGGTTCGCTTGTAATGCTTATTGCAGGATATATGGGTGAGTCTGGAAGTCTTCCAGTATTGCCTGCATTCATTGTTGGGTGCCTAGCATGGTTCTACATGATTTATGAACTATATGCTGGTGAAGGTAAGGCTGCAGTTACTACTGCTAGTCCTGCTGTTATGTCTGCATACAATACTATGATGTTGATTATCGTAGTA LLTVPLLMVEFYLILAACTNVAGSLFKKLLGGSLVMLIAGYMGESGSLPVLPAFIVGCLAWFYMIYELYAGEGKAAVTTASPAVMSAYNTMMLIIVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTAACTGTTCCATTACTAATGGTTGAGTTCTACTTAATTCTTGCAGCT---------TGC---ACAAATGTTGCGGGC---TCATTA------------------------------------TTTAAGAAA---CTACTAGGTGGTTCGCTTGTAATGCTTATTGCAGGATATATGGGTGAG---------TCT------------------GGA------AGT---------------------------------CTT------------------------------------------------------------------CCAGTA------------------TTGCCTGCA---TTCATTGTTGGGTGCCTAGCATGGTTCTACATGATTTATGAACTA---------------TAT------GCT---GGTGAA---GGTAAGGCTGCAGTTACT------ACT---GCTAGTCCTGCTGTT---ATG---TCT---GCA---TAC---AAT---ACTATG---ATGTTGATTATCGTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLILAA---C-TNVAG-SL------------FKK-LLGGSLVMLIAGYMGE---S------G--S-----------L----------------------PV------LPA-FIVGCLAWFYMIYEL-----Y--A-GE-GKAAVT--T-ASPAV-M-S-A-Y-N-TM-MLIIVV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86b]_KJ929271 [IV-Gamma5-SAR86b] PRGD_OTU096_7ef0d990e48852c74135d2a9b7630fda gb|KJ929271| PRGD_OTU096_7ef0d990e48852c74135d2a9b7630fda, putative proteorhodopsin gene, partial cds. PRGD_OTU096_7ef0d990e48852c74135d2a9b7630fda, putative proteorhodopsin gene, partial cds. KJ929271 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTGCTAACTGTTCCGTTACTAATGGTTGAGTTCTATTTAATCCTTGCAGCTTGCACAAATGTTGCGGGTTCATTATTTAAGAAACTACTTGGTGGTTCGCTTGTAATGCTTATTGCAGGATATATGGGTGAGTCTGGAAGTCTTCCAGTATTGCCTGCATTCATTGTTGGGTGCTTAGCATGGTTCTACATGATTTATGAACTATATGCTGGTGAAGGTAAGGCTGCAGTTACTACTGCTAGTCCTGCTGTTATGTCTGCATACAATACTATGATGTTGATTATCGTAGTT LLTVPLLMVEFYLILAACTNVAGSLFKKLLGGSLVMLIAGYMGESGSLPVLPAFIVGCLAWFYMIYELYAGEGKAAVTTASPAVMSAYNTMMLIIVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTAACTGTTCCGTTACTAATGGTTGAGTTCTATTTAATCCTTGCAGCT---------TGC---ACAAATGTTGCGGGT---TCATTA------------------------------------TTTAAGAAA---CTACTTGGTGGTTCGCTTGTAATGCTTATTGCAGGATATATGGGTGAG---------TCT------------------GGA------AGT---------------------------------CTT------------------------------------------------------------------CCAGTA------------------TTGCCTGCA---TTCATTGTTGGGTGCTTAGCATGGTTCTACATGATTTATGAACTA---------------TAT------GCT---GGTGAA---GGTAAGGCTGCAGTTACT------ACT---GCTAGTCCTGCTGTT---ATG---TCT---GCA---TAC---AAT---ACTATG---ATGTTGATTATCGTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLILAA---C-TNVAG-SL------------FKK-LLGGSLVMLIAGYMGE---S------G--S-----------L----------------------PV------LPA-FIVGCLAWFYMIYEL-----Y--A-GE-GKAAVT--T-ASPAV-M-S-A-Y-N-TM-MLIIVV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86b]_KJ929273 [IV-Gamma5-SAR86b] PRGD_OTU096_eaf799280c17d13b2615bfdd660f33e3 gb|KJ929273| PRGD_OTU096_eaf799280c17d13b2615bfdd660f33e3, putative proteorhodopsin gene, partial cds. PRGD_OTU096_eaf799280c17d13b2615bfdd660f33e3, putative proteorhodopsin gene, partial cds. KJ929273 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTACTAACTGTTCCTTTACTAATGGTTGAGTTCTACTTAATCCTTGCAGCTTGCACAAATGTCGCAGGTTCATTATTTAAGAAGCTACTAGGTGGTTCGCTTGTAATGCTTATTGCAGGATATATGGGTGAGTCTGGAAGTCTTCCAGTACTGCCTGCATTCATTGTTGGATGCCTAGCATGGTTCTACATGATTTATGAACTATATGCTGGTGAAGGTAAAGCTGCAGTTACTACTGCTAGTCCAGCTGTTATGTCTGCATACAATACTATGATGTTGATTATCGTAGTA LLTVPLLMVEFYLILAACTNVAGSLFKKLLGGSLVMLIAGYMGESGSLPVLPAFIVGCLAWFYMIYELYAGEGKAAVTTASPAVMSAYNTMMLIIVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTAACTGTTCCTTTACTAATGGTTGAGTTCTACTTAATCCTTGCAGCT---------TGC---ACAAATGTCGCAGGT---TCATTA------------------------------------TTTAAGAAG---CTACTAGGTGGTTCGCTTGTAATGCTTATTGCAGGATATATGGGTGAG---------TCT------------------GGA------AGT---------------------------------CTT------------------------------------------------------------------CCAGTA------------------CTGCCTGCA---TTCATTGTTGGATGCCTAGCATGGTTCTACATGATTTATGAACTA---------------TAT------GCT---GGTGAA---GGTAAAGCTGCAGTTACT------ACT---GCTAGTCCAGCTGTT---ATG---TCT---GCA---TAC---AAT---ACTATG---ATGTTGATTATCGTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLILAA---C-TNVAG-SL------------FKK-LLGGSLVMLIAGYMGE---S------G--S-----------L----------------------PV------LPA-FIVGCLAWFYMIYEL-----Y--A-GE-GKAAVT--T-ASPAV-M-S-A-Y-N-TM-MLIIVV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86b]_KJ929272 [IV-Gamma5-SAR86b] PRGD_OTU096_9b98bcf3d073ef62896b1ca393562b25 gb|KJ929272| PRGD_OTU096_9b98bcf3d073ef62896b1ca393562b25, putative proteorhodopsin gene, partial cds. PRGD_OTU096_9b98bcf3d073ef62896b1ca393562b25, putative proteorhodopsin gene, partial cds. KJ929272 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419) TTGCTAACTGTTCCGTTACTAATGGTTGAGTTCTACTTAATCCTCGCAGCTTGCACTAATGTTGCAGGTTCATTATTTAAGAAACTACTAATTGGTTCGCTTGTAATGCTTATTGCAGGATATATGGGTGAGTCTGGAAGTCTTCCAGTATTGCCTGCATTCCTTGTTGGGTGCGCAGCATGGTTATACATGATTTATGAACTATATGCTGGTGAAGGTAAGGCTGCAGTTACTACTGCTAGTCCTGCTGTTATGTCTGCATACAATACTATGATGTTGATTATCGTAGTA LLTVPLLMVEFYLILAACTNVAGSLFKKLLIGSLVMLIAGYMGESGSLPVLPAFLVGCAAWLYMIYELYAGEGKAAVTTASPAVMSAYNTMMLIIVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTAACTGTTCCGTTACTAATGGTTGAGTTCTACTTAATCCTCGCAGCT---------TGC---ACTAATGTTGCAGGT---TCATTA------------------------------------TTTAAGAAA---CTACTAATTGGTTCGCTTGTAATGCTTATTGCAGGATATATGGGTGAG---------TCT------------------GGA------AGT---------------------------------CTT------------------------------------------------------------------CCAGTA------------------TTGCCTGCA---TTCCTTGTTGGGTGCGCAGCATGGTTATACATGATTTATGAACTA---------------TAT------GCT---GGTGAA---GGTAAGGCTGCAGTTACT------ACT---GCTAGTCCTGCTGTT---ATG---TCT---GCA---TAC---AAT---ACTATG---ATGTTGATTATCGTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLILAA---C-TNVAG-SL------------FKK-LLIGSLVMLIAGYMGE---S------G--S-----------L----------------------PV------LPA-FLVGCAAWLYMIYEL-----Y--A-GE-GKAAVT--T-ASPAV-M-S-A-Y-N-TM-MLIIVV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86b]_KJ929275 [IV-Gamma5-SAR86b] PRGD_OTU096_ee063a55196c09f388950cbc9ea3a241 gb|KJ929275| PRGD_OTU096_ee063a55196c09f388950cbc9ea3a241, putative proteorhodopsin gene, partial cds. PRGD_OTU096_ee063a55196c09f388950cbc9ea3a241, putative proteorhodopsin gene, partial cds. KJ929275 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGCTAACTGTTCCGTTACTAATGGTTGAGTTCTACTTAATCCTCGCAGCTTGCACTAATGTTGCAGGTTCATTATTTAAGAAACTACTAATTGGTTCGCTTGTAATGCTTATTGCAGGATATATGGGTGAGTCTGGAAGTGTTCCAGTATTGCCTGCATTCCTTGTTGGGTGCGTAGCATGGTTATACATGATTTATCAACTATATGCTGGTGAAGGTAAGGCTGCAGTTACTACTGCTAGTCCTGCTGTTATGTCTGCATACAATACTATGTTGTTAATTATCGTAGTA LLTVPLLMVEFYLILAACTNVAGSLFKKLLIGSLVMLIAGYMGESGSVPVLPAFLVGCVAWLYMIYQLYAGEGKAAVTTASPAVMSAYNTMLLIIVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTAACTGTTCCGTTACTAATGGTTGAGTTCTACTTAATCCTCGCAGCT---------TGC---ACTAATGTTGCAGGT---TCATTA------------------------------------TTTAAGAAA---CTACTAATTGGTTCGCTTGTAATGCTTATTGCAGGATATATGGGTGAG---------TCT------------------GGA------AGT---------------------------------GTT------------------------------------------------------------------CCAGTA------------------TTGCCTGCA---TTCCTTGTTGGGTGCGTAGCATGGTTATACATGATTTATCAACTA---------------TAT------GCT---GGTGAA---GGTAAGGCTGCAGTTACT------ACT---GCTAGTCCTGCTGTT---ATG---TCT---GCA---TAC---AAT---ACTATG---TTGTTAATTATCGTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLILAA---C-TNVAG-SL------------FKK-LLIGSLVMLIAGYMGE---S------G--S-----------V----------------------PV------LPA-FLVGCVAWLYMIYQL-----Y--A-GE-GKAAVT--T-ASPAV-M-S-A-Y-N-TM-LLIIVV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86b]_KJ929269 [IV-Gamma5-SAR86b] PRGD_OTU096_otuREP_a8d875d64636cc4c47574c416d5a77a3 gb|KJ929269| PRGD_OTU096_otuREP_a8d875d64636cc4c47574c416d5a77a3, putative proteorhodopsin gene, partial cds. PRGD_OTU096_otuREP_a8d875d64636cc4c47574c416d5a77a3, putative proteorhodopsin gene, partial cds. KJ929269 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) TTGCTAACTGTTCCGTTACTAATGGTTGAGTTCTACTTAATCCTTGCAGCTTGCACAAATGTTGCGGGTTCATTATTTAAGAAACTACTTGGTGGTTCGCTTGTAATGCTTATTGCAGGATATATGGGTGAGTCTGGAAGTCTTCCAGTATTGCCTGCATTCATTGTTGGGTGCTTAGCATGGTTCTACATGATTTATGAACTATATGCTGGTGAAGGTAAGGCTGCAGTTACTACTGCTAGTCCTGCTGTTATGTCTGCATACAATACTATGATGTTGATTATCGTAGTA LLTVPLLMVEFYLILAACTNVAGSLFKKLLGGSLVMLIAGYMGESGSLPVLPAFIVGCLAWFYMIYELYAGEGKAAVTTASPAVMSAYNTMMLIIVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTAACTGTTCCGTTACTAATGGTTGAGTTCTACTTAATCCTTGCAGCT---------TGC---ACAAATGTTGCGGGT---TCATTA------------------------------------TTTAAGAAA---CTACTTGGTGGTTCGCTTGTAATGCTTATTGCAGGATATATGGGTGAG---------TCT------------------GGA------AGT---------------------------------CTT------------------------------------------------------------------CCAGTA------------------TTGCCTGCA---TTCATTGTTGGGTGCTTAGCATGGTTCTACATGATTTATGAACTA---------------TAT------GCT---GGTGAA---GGTAAGGCTGCAGTTACT------ACT---GCTAGTCCTGCTGTT---ATG---TCT---GCA---TAC---AAT---ACTATG---ATGTTGATTATCGTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLILAA---C-TNVAG-SL------------FKK-LLGGSLVMLIAGYMGE---S------G--S-----------L----------------------PV------LPA-FIVGCLAWFYMIYEL-----Y--A-GE-GKAAVT--T-ASPAV-M-S-A-Y-N-TM-MLIIVV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86b]_KJ929515 [IV-Gamma5-SAR86b] PRGD_OTU142_173097f0b629313ea3139611fc4775b2 gb|KJ929515| PRGD_OTU142_173097f0b629313ea3139611fc4775b2, putative proteorhodopsin gene, partial cds. PRGD_OTU142_173097f0b629313ea3139611fc4775b2, putative proteorhodopsin gene, partial cds. KJ929515 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; ; 67.49, -168.12) TTATTAACTGTTCCATTACTGATGGTTGAGTTCTACTTAATTCTTGCTGCATGTACTAATGTTGCAGGTTCATTATTCAAGAAATTGCTTGGCGGTTCGCTAATAATGCTTTTATTTGGATACATGGGTGAAGCTGGAATTATGGGTGCATTGCCTGCATTTGTTGTTGCAATGGCTGCATGGTTATACATGATCCACACTCTATACTTAGGTGAAGGAAAAGCTGCTGTAAGTACTGCAAGTCCTGCTGTTATGTCTGCATACAATACTATGATGTTAATTATAGTAGTT LLTVPLLMVEFYLILAACTNVAGSLFKKLLGGSLIMLLFGYMGEAGIMGALPAFVVAMAAWLYMIHTLYLGEGKAAVSTASPAVMSAYNTMMLIIVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACTGTTCCATTACTGATGGTTGAGTTCTACTTAATTCTTGCTGCA---------TGT---ACTAATGTTGCAGGT---TCATTA------------------------------------TTCAAGAAA---TTGCTTGGCGGTTCGCTAATAATGCTTTTATTTGGATACATGGGTGAA---------GCT------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------GGTGCA------------------TTGCCTGCA---TTTGTTGTTGCAATGGCTGCATGGTTATACATGATCCACACTCTA---------------TAC------TTA---GGTGAA---GGAAAAGCTGCTGTAAGT------ACT---GCAAGTCCTGCTGTT---ATG---TCT---GCA---TAC---AAT---ACTATG---ATGTTAATTATAGTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLILAA---C-TNVAG-SL------------FKK-LLGGSLIMLLFGYMGE---A------G--I-----------M----------------------GA------LPA-FVVAMAAWLYMIHTL-----Y--L-GE-GKAAVS--T-ASPAV-M-S-A-Y-N-TM-MLIIVV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86b]_KJ929516 [IV-Gamma5-SAR86b] PRGD_OTU142_34737d0564c04817efc94e0e1acfafeb gb|KJ929516| PRGD_OTU142_34737d0564c04817efc94e0e1acfafeb, putative proteorhodopsin gene, partial cds. PRGD_OTU142_34737d0564c04817efc94e0e1acfafeb, putative proteorhodopsin gene, partial cds. KJ929516 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), Mediterranean Sea (38.6308, 7.9097) TTATTAACTGTTCCATTACTGATGGTTGAGTTCTACTTAATTCTTGCTGCATGTACTAATGTTGCAGGTTCATTATTCAAGAAATTGCTTGGCGGTTCGCTAGTAATGCTTTTATTTGGATACATGGGTGAAGCTGGAATTATGGGTGCATTGCCTGCATTTGTTGTTGCAATGGCTGCATGGTTATACATGATCCACACTCTATACTTAGGTGAAGGAAAAGCTGCTGTAAGTACTGCAAGTCCTGCTGTTATGTCTGCATACAATACTATGATGCTAATTATAGTAGTT LLTVPLLMVEFYLILAACTNVAGSLFKKLLGGSLVMLLFGYMGEAGIMGALPAFVVAMAAWLYMIHTLYLGEGKAAVSTASPAVMSAYNTMMLIIVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACTGTTCCATTACTGATGGTTGAGTTCTACTTAATTCTTGCTGCA---------TGT---ACTAATGTTGCAGGT---TCATTA------------------------------------TTCAAGAAA---TTGCTTGGCGGTTCGCTAGTAATGCTTTTATTTGGATACATGGGTGAA---------GCT------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------GGTGCA------------------TTGCCTGCA---TTTGTTGTTGCAATGGCTGCATGGTTATACATGATCCACACTCTA---------------TAC------TTA---GGTGAA---GGAAAAGCTGCTGTAAGT------ACT---GCAAGTCCTGCTGTT---ATG---TCT---GCA---TAC---AAT---ACTATG---ATGCTAATTATAGTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLILAA---C-TNVAG-SL------------FKK-LLGGSLVMLLFGYMGE---A------G--I-----------M----------------------GA------LPA-FVVAMAAWLYMIHTL-----Y--L-GE-GKAAVS--T-ASPAV-M-S-A-Y-N-TM-MLIIVV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86b]_KJ929514 [IV-Gamma5-SAR86b] PRGD_OTU142_otuREP_22d411572b6de032c0a4124debe4f3d1 gb|KJ929514| PRGD_OTU142_otuREP_22d411572b6de032c0a4124debe4f3d1, putative proteorhodopsin gene, partial cds. PRGD_OTU142_otuREP_22d411572b6de032c0a4124debe4f3d1, putative proteorhodopsin gene, partial cds. KJ929514 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683) TTATTAACTGTTCCATTACTGATGGTTGAGTTCTACTTAATTCTTGCTGCATGTACTAATGTTGCAGGTTCATTATTCAAGAAATTGCTTGGCGGTTCGCTAGTAATGCTTTTATTTGGATACATGGGTGAAGCTGGAATTATGGGAGCATTACCTGCATTTGTTGTTGCAATGGCTGCATGGTTATACATGATCCACACTCTATACTTGGGTGAAGGAAAAGCTGCTGTAAGTACTGCAAGTCCTGCTGTTATGTCTGCATACAATACTATGATGCTAATTATAGTAGTT LLTVPLLMVEFYLILAACTNVAGSLFKKLLGGSLVMLLFGYMGEAGIMGALPAFVVAMAAWLYMIHTLYLGEGKAAVSTASPAVMSAYNTMMLIIVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACTGTTCCATTACTGATGGTTGAGTTCTACTTAATTCTTGCTGCA---------TGT---ACTAATGTTGCAGGT---TCATTA------------------------------------TTCAAGAAA---TTGCTTGGCGGTTCGCTAGTAATGCTTTTATTTGGATACATGGGTGAA---------GCT------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------GGAGCA------------------TTACCTGCA---TTTGTTGTTGCAATGGCTGCATGGTTATACATGATCCACACTCTA---------------TAC------TTG---GGTGAA---GGAAAAGCTGCTGTAAGT------ACT---GCAAGTCCTGCTGTT---ATG---TCT---GCA---TAC---AAT---ACTATG---ATGCTAATTATAGTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLILAA---C-TNVAG-SL------------FKK-LLGGSLVMLLFGYMGE---A------G--I-----------M----------------------GA------LPA-FVVAMAAWLYMIHTL-----Y--L-GE-GKAAVS--T-ASPAV-M-S-A-Y-N-TM-MLIIVV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86b]_KJ929517 [IV-Gamma5-SAR86b] PRGD_OTU142_a99ecba15e1a1d45111417924585648b gb|KJ929517| PRGD_OTU142_a99ecba15e1a1d45111417924585648b, putative proteorhodopsin gene, partial cds. PRGD_OTU142_a99ecba15e1a1d45111417924585648b, putative proteorhodopsin gene, partial cds. KJ929517 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12) TTGTTAACTGTTCCATTACTAATGGTTGAGTTCTACTTAATTCTTGCTGCATGTACTAATGTTGCAGGTTCATTATTCAAGAAATTGCTTGGTGGTTCACTAGTAATGCTTTTATTTGGATATATGGGTGAAGCTGGAATTATGGGAGCATTACCTGCATTTGTTGTTGCAATGGCTGCATGGTTATACATGATCCACACTCTATACTTGGGTGAAGGAAAAGCTGCTGTAAGTACTGCAAGTCCTGCTGTTATGTCTGCATACAATACTATGATGCTAATTATAGTAGTT LLTVPLLMVEFYLILAACTNVAGSLFKKLLGGSLVMLLFGYMGEAGIMGALPAFVVAMAAWLYMIHTLYLGEGKAAVSTASPAVMSAYNTMMLIIVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTAACTGTTCCATTACTAATGGTTGAGTTCTACTTAATTCTTGCTGCA---------TGT---ACTAATGTTGCAGGT---TCATTA------------------------------------TTCAAGAAA---TTGCTTGGTGGTTCACTAGTAATGCTTTTATTTGGATATATGGGTGAA---------GCT------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------GGAGCA------------------TTACCTGCA---TTTGTTGTTGCAATGGCTGCATGGTTATACATGATCCACACTCTA---------------TAC------TTG---GGTGAA---GGAAAAGCTGCTGTAAGT------ACT---GCAAGTCCTGCTGTT---ATG---TCT---GCA---TAC---AAT---ACTATG---ATGCTAATTATAGTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLILAA---C-TNVAG-SL------------FKK-LLGGSLVMLLFGYMGE---A------G--I-----------M----------------------GA------LPA-FVVAMAAWLYMIHTL-----Y--L-GE-GKAAVS--T-ASPAV-M-S-A-Y-N-TM-MLIIVV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86b]_KJ929842 [IV-Gamma5-SAR86b] PRGD_OTU293_otuREP_e216e4031af6dff12e4ceb86203e6ccf gb|KJ929842| PRGD_OTU293_otuREP_e216e4031af6dff12e4ceb86203e6ccf, putative proteorhodopsin gene, partial cds. PRGD_OTU293_otuREP_e216e4031af6dff12e4ceb86203e6ccf, putative proteorhodopsin gene, partial cds. KJ929842 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683) TTATTAACTGTTCCATTACAAATGGTTGAGTTCTATCTAATTCTTGCTGCTTGTACAAGTGTTGCTGCTTCATTATTTAAGAAGCTTCTAGCTGGTTCATTAGTAATGTTAGGTGCTGGATTTGCAGGCGAAGCTGGATTAGCTCCTGTATTACCTGCTTTCATTATTGGTATGGCTGGATGGTTATACATGATTTATGAGCTATATATGGGTGAAGGTAAGGCTGCTGTAAGTACTGCAAGTCCTGCTGTTAACTCTGCATACAACGCAATGATGATGATTATTGTTGTT LLTVPLQMVEFYLILAACTSVAASLFKKLLAGSLVMLGAGFAGEAGLAPVLPAFIIGMAGWLYMIYELYMGEGKAAVSTASPAVNSAYNAMMMIIVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACTGTTCCATTACAAATGGTTGAGTTCTATCTAATTCTTGCTGCT---------TGT---ACAAGTGTTGCTGCT---TCATTA------------------------------------TTTAAGAAG---CTTCTAGCTGGTTCATTAGTAATGTTAGGTGCTGGATTTGCAGGCGAA---------GCT------------------GGA------TTA---------------------------------GCT------------------------------------------------------------------CCTGTA------------------TTACCTGCT---TTCATTATTGGTATGGCTGGATGGTTATACATGATTTATGAGCTA---------------TAT------ATG---GGTGAA---GGTAAGGCTGCTGTAAGT------ACT---GCAAGTCCTGCTGTT---AAC---TCT---GCA---TAC---AAC---GCAATG---ATGATGATTATTGTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMVEFYLILAA---C-TSVAA-SL------------FKK-LLAGSLVMLGAGFAGE---A------G--L-----------A----------------------PV------LPA-FIIGMAGWLYMIYEL-----Y--M-GE-GKAAVS--T-ASPAV-N-S-A-Y-N-AM-MMIIVV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86b]_KJ929894 [IV-Gamma5-SAR86b] PRGD_OTU345_otuREP_c5fad31d1223d596a5c05dc21f7ed8f3 gb|KJ929894| PRGD_OTU345_otuREP_c5fad31d1223d596a5c05dc21f7ed8f3, putative proteorhodopsin gene, partial cds. PRGD_OTU345_otuREP_c5fad31d1223d596a5c05dc21f7ed8f3, putative proteorhodopsin gene, partial cds. KJ929894 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_B-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_B-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTATTAACAGTTCCATTACAAATGATTGAATTCTATTTAATCCTAGCAGCATGTACTGCTGTCGCAGGTTCATTATTTAGAAAACTATTATTTGGTTCTTTGGTTATGTTAATTGGTGGTTTCTTAGGTGAAGCAGGTGTAATGGCAGTATGGCCAGCGTTCATTATCGGAATGGCAGGATGGCTATATATGATATATGAGCTTTACTTAGGTGAAGGAAAATCCGCGGTTTCAACAGCTAGCGTGGCTGTTAATTCTGCCTATAAAGCTATGATGGCAATTATCGTATTT LLTVPLQMIEFYLILAACTAVAGSLFRKLLFGSLVMLIGGFLGEAGVMAVWPAFIIGMAGWLYMIYELYLGEGKSAVSTASVAVNSAYKAMMAIIVF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACAGTTCCATTACAAATGATTGAATTCTATTTAATCCTAGCAGCA---------TGT---ACTGCTGTCGCAGGT---TCATTA------------------------------------TTTAGAAAA---CTATTATTTGGTTCTTTGGTTATGTTAATTGGTGGTTTCTTAGGTGAA---------GCA------------------GGT------GTA---------------------------------ATG------------------------------------------------------------------GCAGTA------------------TGGCCAGCG---TTCATTATCGGAATGGCAGGATGGCTATATATGATATATGAGCTT---------------TAC------TTA---GGTGAA---GGAAAATCCGCGGTTTCA------ACA---GCTAGCGTGGCTGTT---AAT---TCT---GCC---TAT---AAA---GCTATG---ATGGCAATTATCGTATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMIEFYLILAA---C-TAVAG-SL------------FRK-LLFGSLVMLIGGFLGE---A------G--V-----------M----------------------AV------WPA-FIIGMAGWLYMIYEL-----Y--L-GE-GKSAVS--T-ASVAV-N-S-A-Y-K-AM-MAIIVF-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ929867 [IV-Gamma5-SAR86e] PRGD_OTU318_otuREP_ab7136475ee1ccb1f1f906f3d20eb7ba gb|KJ929867| PRGD_OTU318_otuREP_ab7136475ee1ccb1f1f906f3d20eb7ba, putative proteorhodopsin gene, partial cds. PRGD_OTU318_otuREP_ab7136475ee1ccb1f1f906f3d20eb7ba, putative proteorhodopsin gene, partial cds. KJ929867 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTGTTAACAGTTCCATTACTGATGATAGAGTTCTATCTAATCCTCAGAGCTGTTACTACTGTAGCTTCTTCATTATTCAATAAGTTATTTTTTGGCTCATTGATAATGCTTATATTTGGTTACTTAGGTGAATCTGGAAACTTAAACGCTACAATCGCATTTGCTATTGGTTGCGCAGCATGGATTTACATGATCTGGACCCTTTGGGGCGGAGAAGGTAAAGCTGCTGTTAGCGGAACAAGTGCTTCAGTTCAGACTGCATACAATACTATGATGTGGATTATCATCGTG LLTVPLLMIEFYLILRAVTTVASSLFNKLFFGSLIMLIFGYLGESGNLNATIAFAIGCAAWIYMIWTLWGGEGKAAVSGTSASVQTAYNTMMWIIIV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTAACAGTTCCATTACTGATGATAGAGTTCTATCTAATCCTCAGAGCT---------GTT---ACTACTGTAGCTTCT---TCATTA------------------------------------TTCAATAAG---TTATTTTTTGGCTCATTGATAATGCTTATATTTGGTTACTTAGGTGAA---------TCT------------------GGA------AAC---------------------------------TTA------------------------------------------------------------------AACGCT------------------ACAATCGCA---TTTGCTATTGGTTGCGCAGCATGGATTTACATGATCTGGACCCTT---------------TGG------GGC---GGAGAA---GGTAAAGCTGCTGTTAGC------GGA---ACAAGTGCTTCAGTT---CAG---ACT---GCA---TAC---AAT---ACTATG---ATGTGGATTATCATCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILRA---V-TTVAS-SL------------FNK-LFFGSLIMLIFGYLGE---S------G--N-----------L----------------------NA------TIA-FAIGCAAWIYMIWTL-----W--G-GE-GKAAVS--G-TSASV-Q-T-A-Y-N-TM-MWIIIV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ929712 [IV-Gamma5-SAR86e] PRGD_OTU208_otuREP_0e4d3b75cd2806ceb949ac426ca9e8d0 gb|KJ929712| PRGD_OTU208_otuREP_0e4d3b75cd2806ceb949ac426ca9e8d0, putative proteorhodopsin gene, partial cds. PRGD_OTU208_otuREP_0e4d3b75cd2806ceb949ac426ca9e8d0, putative proteorhodopsin gene, partial cds. KJ929712 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTCTTAACTGTTCCACTGCTCATGGCAGAGTTTTATCTTATTCTAAGAGCGGTAACTGAAGTTGCTGCATCTTTGTTTTATAAATTATTCGTGAGCTCTTTACTGATGCTTGTATTTGGTTATGCAGGAGAAGCAGGTCTTATGCCAGCTCTTCCAGCATTCCTTATAGGAGTGGCTTTTTGGGTTTACATGATCTACATACTATGGATGGGAGAAGGCAAAGAAGCAGCTTTAACAACCAGTCCATCAGTTCAAACTGCTTACACCACAATGATGTGGATCATTATTGTA LLTVPLLMAEFYLILRAVTEVAASLFYKLFVSSLLMLVFGYAGEAGLMPALPAFLIGVAFWVYMIYILWMGEGKEAALTTSPSVQTAYTTMMWIIIV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACTGTTCCACTGCTCATGGCAGAGTTTTATCTTATTCTAAGAGCG---------GTA---ACTGAAGTTGCTGCA---TCTTTG------------------------------------TTTTATAAA---TTATTCGTGAGCTCTTTACTGATGCTTGTATTTGGTTATGCAGGAGAA---------GCA------------------GGT------CTT---------------------------------ATG------------------------------------------------------------------CCAGCT------------------CTTCCAGCA---TTCCTTATAGGAGTGGCTTTTTGGGTTTACATGATCTACATACTA---------------TGG------ATG---GGAGAA---GGCAAAGAAGCAGCTTTA------ACA---ACCAGTCCATCAGTT---CAA---ACT---GCT---TAC---ACC---ACAATG---ATGTGGATCATTATTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMAEFYLILRA---V-TEVAA-SL------------FYK-LFVSSLLMLVFGYAGE---A------G--L-----------M----------------------PA------LPA-FLIGVAFWVYMIYIL-----W--M-GE-GKEAAL--T-TSPSV-Q-T-A-Y-T-TM-MWIIIV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ929713 [IV-Gamma5-SAR86e] PRGD_OTU208_6a58bf546424445c449bf575348c9c60 gb|KJ929713| PRGD_OTU208_6a58bf546424445c449bf575348c9c60, putative proteorhodopsin gene, partial cds. PRGD_OTU208_6a58bf546424445c449bf575348c9c60, putative proteorhodopsin gene, partial cds. KJ929713 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCTTAACCGTTCCACTACTCATGGCAGAGTTTTATCTTATTCTAAGAGCGGTAACTGAAGTTGCTGCTTCTTTGTTTTATAAATTATTCGTGAGCTCTTTACTGATGCTTGTATTTGGTTATGCAGGAGAAGCAGGCCTTATGCCAGCTCTTCCAGCGTTCCTTATAGGGGTTGCTTTTTGGGTTTACATGATCTACATACTGTGGATGGGAGAAGGTAAAGAAGCAGCTTTAACAACCAGTCCATCAGTTCAAACTGCTTACACCACAATGATGTGGATTATTATTGTA LLTVPLLMAEFYLILRAVTEVAASLFYKLFVSSLLMLVFGYAGEAGLMPALPAFLIGVAFWVYMIYILWMGEGKEAALTTSPSVQTAYTTMMWIIIV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACCGTTCCACTACTCATGGCAGAGTTTTATCTTATTCTAAGAGCG---------GTA---ACTGAAGTTGCTGCT---TCTTTG------------------------------------TTTTATAAA---TTATTCGTGAGCTCTTTACTGATGCTTGTATTTGGTTATGCAGGAGAA---------GCA------------------GGC------CTT---------------------------------ATG------------------------------------------------------------------CCAGCT------------------CTTCCAGCG---TTCCTTATAGGGGTTGCTTTTTGGGTTTACATGATCTACATACTG---------------TGG------ATG---GGAGAA---GGTAAAGAAGCAGCTTTA------ACA---ACCAGTCCATCAGTT---CAA---ACT---GCT---TAC---ACC---ACAATG---ATGTGGATTATTATTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMAEFYLILRA---V-TEVAA-SL------------FYK-LFVSSLLMLVFGYAGE---A------G--L-----------M----------------------PA------LPA-FLIGVAFWVYMIYIL-----W--M-GE-GKEAAL--T-TSPSV-Q-T-A-Y-T-TM-MWIIIV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ929182 [IV-Gamma5-SAR86e] PRGD_OTU084_d262c799a6fcc7daf091733975162db8 gb|KJ929182| PRGD_OTU084_d262c799a6fcc7daf091733975162db8, putative proteorhodopsin gene, partial cds. PRGD_OTU084_d262c799a6fcc7daf091733975162db8, putative proteorhodopsin gene, partial cds. KJ929182 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTACTGACAGTACCTCTTCAAATGGTTGAATTCTATTTGATATTAGCAGCTGTTACAGTGGTTGCAGGTTCTTTGTTCTGGCAACTACTATTAGGTTCACTAGTCATGTTGATATTTGGTTACATGGGTGAAGCTGGTGTTATGGCGGCGATGCCTGCATTCGTTATCGGAATGGCAGCTTGGTTGTACATGATTTATGTTCTATACATGGGAGCTGGTAAAGCTGCTGTGGCTTCAACAAGTGCCTCTGTGCAAACAGCTTATAATTCTATGCTTTTGATCATAGTTGTA LLTVPLQMVEFYLILAAVTVVAGSLFWQLLLGSLVMLIFGYMGEAGVMAAMPAFVIGMAAWLYMIYVLYMGAGKAAVASTSASVQTAYNSMLLIIVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTGACAGTACCTCTTCAAATGGTTGAATTCTATTTGATATTAGCAGCT---------GTT---ACAGTGGTTGCAGGT---TCTTTG------------------------------------TTCTGGCAA---CTACTATTAGGTTCACTAGTCATGTTGATATTTGGTTACATGGGTGAA---------GCT------------------GGT------GTT---------------------------------ATG------------------------------------------------------------------GCGGCG------------------ATGCCTGCA---TTCGTTATCGGAATGGCAGCTTGGTTGTACATGATTTATGTTCTA---------------TAC------ATG---GGAGCT---GGTAAAGCTGCTGTGGCT------TCA---ACAAGTGCCTCTGTG---CAA---ACA---GCT---TAT---AAT---TCTATG---CTTTTGATCATAGTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMVEFYLILAA---V-TVVAG-SL------------FWQ-LLLGSLVMLIFGYMGE---A------G--V-----------M----------------------AA------MPA-FVIGMAAWLYMIYVL-----Y--M-GA-GKAAVA--S-TSASV-Q-T-A-Y-N-SM-LLIIVV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ929180 [IV-Gamma5-SAR86e] PRGD_OTU084_87e3ff4ba4317d7311e46f5bcd02e9b0 gb|KJ929180| PRGD_OTU084_87e3ff4ba4317d7311e46f5bcd02e9b0, putative proteorhodopsin gene, partial cds. PRGD_OTU084_87e3ff4ba4317d7311e46f5bcd02e9b0, putative proteorhodopsin gene, partial cds. KJ929180 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGTTAACAGTGCCACTTCAAATGGTTGAATTCTATTTGATATTAGCAGCTGTAACGGCTGTTGCTAGTGGACTATTCTGGCAATTGCTTCTTGGTTCATTGGTAATGTTAATTTTTGGTTTCATGGGAGAAGCTGGAATAATGGCAGCTATGCCTGCATTCGTAATCGGAATGCTAGCTTGGATATATATGATTTATGTACTATATATGGGAGCAGGTAAGGCAGCTATGGCAACTACTAGTGCTTCAGTGCAAACAGCTTACAACTCAATGTTATTAATCATTGTTGTT LLTVPLQMVEFYLILAAVTAVASGLFWQLLLGSLVMLIFGFMGEAGIMAAMPAFVIGMLAWIYMIYVLYMGAGKAAMATTSASVQTAYNSMLLIIVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTAACAGTGCCACTTCAAATGGTTGAATTCTATTTGATATTAGCAGCT---------GTA---ACGGCTGTTGCTAGT---GGACTA------------------------------------TTCTGGCAA---TTGCTTCTTGGTTCATTGGTAATGTTAATTTTTGGTTTCATGGGAGAA---------GCT------------------GGA------ATA---------------------------------ATG------------------------------------------------------------------GCAGCT------------------ATGCCTGCA---TTCGTAATCGGAATGCTAGCTTGGATATATATGATTTATGTACTA---------------TAT------ATG---GGAGCA---GGTAAGGCAGCTATGGCA------ACT---ACTAGTGCTTCAGTG---CAA---ACA---GCT---TAC---AAC---TCAATG---TTATTAATCATTGTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMVEFYLILAA---V-TAVAS-GL------------FWQ-LLLGSLVMLIFGFMGE---A------G--I-----------M----------------------AA------MPA-FVIGMLAWIYMIYVL-----Y--M-GA-GKAAMA--T-TSASV-Q-T-A-Y-N-SM-LLIIVV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ929181 [IV-Gamma5-SAR86e] PRGD_OTU084_8bea3d60f874fa919def9de2c4a80943 gb|KJ929181| PRGD_OTU084_8bea3d60f874fa919def9de2c4a80943, putative proteorhodopsin gene, partial cds. PRGD_OTU084_8bea3d60f874fa919def9de2c4a80943, putative proteorhodopsin gene, partial cds. KJ929181 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683) TTGTTAACAGTGCCGCTTCAAATGGTTGAATTCTATTTGATATTAGCAGCTGTAACGGCTGTTGCTAGTGGACTATTTTGGCAATTGCTTCTTGGTTCATTGGTAATGTTAATTTTTGGTTTCATGGGAGAAGCTGGAATAATGGCAGCTATGCCTGCATTCGTAATTGGAATGCTAGCTTGGATATATATGATTTATGTACTGTATATGGGAGCAGGTAAAGCGGCTGTGGCAACTACGAGTGCTTCAGTGCAAACAGCTTACAACTCAATGTTATTAATCATTGTTGTT LLTVPLQMVEFYLILAAVTAVASGLFWQLLLGSLVMLIFGFMGEAGIMAAMPAFVIGMLAWIYMIYVLYMGAGKAAVATTSASVQTAYNSMLLIIVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTAACAGTGCCGCTTCAAATGGTTGAATTCTATTTGATATTAGCAGCT---------GTA---ACGGCTGTTGCTAGT---GGACTA------------------------------------TTTTGGCAA---TTGCTTCTTGGTTCATTGGTAATGTTAATTTTTGGTTTCATGGGAGAA---------GCT------------------GGA------ATA---------------------------------ATG------------------------------------------------------------------GCAGCT------------------ATGCCTGCA---TTCGTAATTGGAATGCTAGCTTGGATATATATGATTTATGTACTG---------------TAT------ATG---GGAGCA---GGTAAAGCGGCTGTGGCA------ACT---ACGAGTGCTTCAGTG---CAA---ACA---GCT---TAC---AAC---TCAATG---TTATTAATCATTGTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMVEFYLILAA---V-TAVAS-GL------------FWQ-LLLGSLVMLIFGFMGE---A------G--I-----------M----------------------AA------MPA-FVIGMLAWIYMIYVL-----Y--M-GA-GKAAVA--T-TSASV-Q-T-A-Y-N-SM-LLIIVV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ929174 [IV-Gamma5-SAR86e] PRGD_OTU084_otuREP_6fbab5886437e09ce00d602cf3d72b94 gb|KJ929174| PRGD_OTU084_otuREP_6fbab5886437e09ce00d602cf3d72b94, putative proteorhodopsin gene, partial cds. PRGD_OTU084_otuREP_6fbab5886437e09ce00d602cf3d72b94, putative proteorhodopsin gene, partial cds. KJ929174 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-35.05, 23.73) CTACTTACAGTTCCACTTCAAATGGTTGAATTCTATTTGATATTAGCTGCTGTAACAGTAGTTGCTGGTTCTTTATTCTGGCAACTTCTACTTGGCTCTTTAGTCATGTTAATTTTTGGTTACATGGGTGAGGCTGGTCTTATGGCTGCTATGCCTGCATTTGTAATTGGAATGCTAGCTTGGTTATATATGATCTATGTTCTTTACATGGGTGCTGGTAAAGCTGCTGTTGCTTCCACAAGCGCTTCAGTTCAGACAGCTTATAACTCAATGTTATTGATCATTGTTGTT LLTVPLQMVEFYLILAAVTVVAGSLFWQLLLGSLVMLIFGYMGEAGLMAAMPAFVIGMLAWLYMIYVLYMGAGKAAVASTSASVQTAYNSMLLIIVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTTACAGTTCCACTTCAAATGGTTGAATTCTATTTGATATTAGCTGCT---------GTA---ACAGTAGTTGCTGGT---TCTTTA------------------------------------TTCTGGCAA---CTTCTACTTGGCTCTTTAGTCATGTTAATTTTTGGTTACATGGGTGAG---------GCT------------------GGT------CTT---------------------------------ATG------------------------------------------------------------------GCTGCT------------------ATGCCTGCA---TTTGTAATTGGAATGCTAGCTTGGTTATATATGATCTATGTTCTT---------------TAC------ATG---GGTGCT---GGTAAAGCTGCTGTTGCT------TCC---ACAAGCGCTTCAGTT---CAG---ACA---GCT---TAT---AAC---TCAATG---TTATTGATCATTGTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMVEFYLILAA---V-TVVAG-SL------------FWQ-LLLGSLVMLIFGYMGE---A------G--L-----------M----------------------AA------MPA-FVIGMLAWLYMIYVL-----Y--M-GA-GKAAVA--S-TSASV-Q-T-A-Y-N-SM-LLIIVV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ929178 [IV-Gamma5-SAR86e] PRGD_OTU084_67253124368ce686790397ba88526cb5 gb|KJ929178| PRGD_OTU084_67253124368ce686790397ba88526cb5, putative proteorhodopsin gene, partial cds. PRGD_OTU084_67253124368ce686790397ba88526cb5, putative proteorhodopsin gene, partial cds. KJ929178 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTACTTACAGTTCCACTTCAAATGGTTGAATTCTATTTGATATTAGCTGCTGTAACAGTAGTTGCTGGTTCTTTATTCTGGCAACTTCTACTTGGCTCTTTAGTCATGCTAATTTTTGGTTACATGGGTGAGGCTGGTCTTATGGCTGCTATGCCTGCATTTGTAATTGGAATGCTAGCTTGGTTATATATGATCTATGTTCTTTACATGGGTGCTGGTAAAGCTGCAGTTGCTTCTACAAGTGCTTCAGTTCAGACAGCTTACAACTCAATGTTATTGATCATTGTTGTT LLTVPLQMVEFYLILAAVTVVAGSLFWQLLLGSLVMLIFGYMGEAGLMAAMPAFVIGMLAWLYMIYVLYMGAGKAAVASTSASVQTAYNSMLLIIVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTTACAGTTCCACTTCAAATGGTTGAATTCTATTTGATATTAGCTGCT---------GTA---ACAGTAGTTGCTGGT---TCTTTA------------------------------------TTCTGGCAA---CTTCTACTTGGCTCTTTAGTCATGCTAATTTTTGGTTACATGGGTGAG---------GCT------------------GGT------CTT---------------------------------ATG------------------------------------------------------------------GCTGCT------------------ATGCCTGCA---TTTGTAATTGGAATGCTAGCTTGGTTATATATGATCTATGTTCTT---------------TAC------ATG---GGTGCT---GGTAAAGCTGCAGTTGCT------TCT---ACAAGTGCTTCAGTT---CAG---ACA---GCT---TAC---AAC---TCAATG---TTATTGATCATTGTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMVEFYLILAA---V-TVVAG-SL------------FWQ-LLLGSLVMLIFGYMGE---A------G--L-----------M----------------------AA------MPA-FVIGMLAWLYMIYVL-----Y--M-GA-GKAAVA--S-TSASV-Q-T-A-Y-N-SM-LLIIVV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ929176 [IV-Gamma5-SAR86e] PRGD_OTU084_2488e959fe4db4a62be5bcc35882b5e8 gb|KJ929176| PRGD_OTU084_2488e959fe4db4a62be5bcc35882b5e8, putative proteorhodopsin gene, partial cds. PRGD_OTU084_2488e959fe4db4a62be5bcc35882b5e8, putative proteorhodopsin gene, partial cds. KJ929176 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTATTAACAGTACCACTGCAGATGGTTGAATTTTATTTGATTCTAGCAGCTGTAACTGTCGTAGCTGGTTCTTTGTTCTGGCAATTGCTATTAGGTTCTTTAGTAATGTTGATTTTCGGTTTCATGGGTGAGGCTGGACTTATGTCTGCAATGCCTGCTTTCATAATCGGAATGCTAGCTTGGCTTTACATGATCTATGTTCTATACATGGGTGCTGGTAAGGCTGCTGTATCTTCAACAAGTGCTTCAGTTCAGACTGCATATAATTCAATGTTATTGATTATTGTTGTT LLTVPLQMVEFYLILAAVTVVAGSLFWQLLLGSLVMLIFGFMGEAGLMSAMPAFIIGMLAWLYMIYVLYMGAGKAAVSSTSASVQTAYNSMLLIIVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACAGTACCACTGCAGATGGTTGAATTTTATTTGATTCTAGCAGCT---------GTA---ACTGTCGTAGCTGGT---TCTTTG------------------------------------TTCTGGCAA---TTGCTATTAGGTTCTTTAGTAATGTTGATTTTCGGTTTCATGGGTGAG---------GCT------------------GGA------CTT---------------------------------ATG------------------------------------------------------------------TCTGCA------------------ATGCCTGCT---TTCATAATCGGAATGCTAGCTTGGCTTTACATGATCTATGTTCTA---------------TAC------ATG---GGTGCT---GGTAAGGCTGCTGTATCT------TCA---ACAAGTGCTTCAGTT---CAG---ACT---GCA---TAT---AAT---TCAATG---TTATTGATTATTGTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMVEFYLILAA---V-TVVAG-SL------------FWQ-LLLGSLVMLIFGFMGE---A------G--L-----------M----------------------SA------MPA-FIIGMLAWLYMIYVL-----Y--M-GA-GKAAVS--S-TSASV-Q-T-A-Y-N-SM-LLIIVV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ929177 [IV-Gamma5-SAR86e] PRGD_OTU084_5a8388aeed6fe051b5a714222d1049f8 gb|KJ929177| PRGD_OTU084_5a8388aeed6fe051b5a714222d1049f8, putative proteorhodopsin gene, partial cds. PRGD_OTU084_5a8388aeed6fe051b5a714222d1049f8, putative proteorhodopsin gene, partial cds. KJ929177 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTATTAACAGTACCATTGCAGATGGTTGAATTTTATTTGATTCTAGCAGCTGTTACTGTAGTAGCTGGTTCTTTGTTCTGGCAATTGCTATTAGGTTCTTTAGTAATGTTGATTTTCGGTTTCATGGGTGAGGCTGGACTTATGTCTGCAATGCCTGCTTTCATAATCGGAATGCTAGCTTGGCTTTACATGATCTATGTTCTATACATGGGTGCTGGTAAGGCTGCTGTATCTTCAACAAGCGCTTCAGTTCAGACTGCATATAATTCAATGTTATTGATTATTGTTGTT LLTVPLQMVEFYLILAAVTVVAGSLFWQLLLGSLVMLIFGFMGEAGLMSAMPAFIIGMLAWLYMIYVLYMGAGKAAVSSTSASVQTAYNSMLLIIVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACAGTACCATTGCAGATGGTTGAATTTTATTTGATTCTAGCAGCT---------GTT---ACTGTAGTAGCTGGT---TCTTTG------------------------------------TTCTGGCAA---TTGCTATTAGGTTCTTTAGTAATGTTGATTTTCGGTTTCATGGGTGAG---------GCT------------------GGA------CTT---------------------------------ATG------------------------------------------------------------------TCTGCA------------------ATGCCTGCT---TTCATAATCGGAATGCTAGCTTGGCTTTACATGATCTATGTTCTA---------------TAC------ATG---GGTGCT---GGTAAGGCTGCTGTATCT------TCA---ACAAGCGCTTCAGTT---CAG---ACT---GCA---TAT---AAT---TCAATG---TTATTGATTATTGTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMVEFYLILAA---V-TVVAG-SL------------FWQ-LLLGSLVMLIFGFMGE---A------G--L-----------M----------------------SA------MPA-FIIGMLAWLYMIYVL-----Y--M-GA-GKAAVS--S-TSASV-Q-T-A-Y-N-SM-LLIIVV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ929175 [IV-Gamma5-SAR86e] PRGD_OTU084_22e300a14a57b11942fe01458b80cadd gb|KJ929175| PRGD_OTU084_22e300a14a57b11942fe01458b80cadd, putative proteorhodopsin gene, partial cds. PRGD_OTU084_22e300a14a57b11942fe01458b80cadd, putative proteorhodopsin gene, partial cds. KJ929175 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGTTAACAGTTCCTTTACAAATGGTTGAGTTCTACTTGATCCTAGCAGCTGTTACGGCTGTTGCAGGTTCATTATTCTGGAAACTTTTGGTAGGTTCTTTAGTAATGTTAATTTTTGGTTTCATGGGTGAAGCGGGAATAATGGCCGCTATGCCTGCTTTTATAATTGGAATGGCCGCTTGGTTATACATGATCTATGTTTTATATATGGGTGATGGTAAAACAGCTGTCGCTTCAACTAGTGCTTCTGTCCAAACTGCATACAACACTATGATGTTAATCATCGTGTTT LLTVPLQMVEFYLILAAVTAVAGSLFWKLLVGSLVMLIFGFMGEAGIMAAMPAFIIGMAAWLYMIYVLYMGDGKTAVASTSASVQTAYNTMMLIIVF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTAACAGTTCCTTTACAAATGGTTGAGTTCTACTTGATCCTAGCAGCT---------GTT---ACGGCTGTTGCAGGT---TCATTA------------------------------------TTCTGGAAA---CTTTTGGTAGGTTCTTTAGTAATGTTAATTTTTGGTTTCATGGGTGAA---------GCG------------------GGA------ATA---------------------------------ATG------------------------------------------------------------------GCCGCT------------------ATGCCTGCT---TTTATAATTGGAATGGCCGCTTGGTTATACATGATCTATGTTTTA---------------TAT------ATG---GGTGAT---GGTAAAACAGCTGTCGCT------TCA---ACTAGTGCTTCTGTC---CAA---ACT---GCA---TAC---AAC---ACTATG---ATGTTAATCATCGTGTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMVEFYLILAA---V-TAVAG-SL------------FWK-LLVGSLVMLIFGFMGE---A------G--I-----------M----------------------AA------MPA-FIIGMAAWLYMIYVL-----Y--M-GD-GKTAVA--S-TSASV-Q-T-A-Y-N-TM-MLIIVF-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ929179 [IV-Gamma5-SAR86e] PRGD_OTU084_844eae4626d3b4c52b5834f051dea6bb gb|KJ929179| PRGD_OTU084_844eae4626d3b4c52b5834f051dea6bb, putative proteorhodopsin gene, partial cds. PRGD_OTU084_844eae4626d3b4c52b5834f051dea6bb, putative proteorhodopsin gene, partial cds. KJ929179 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683) TTGTTGACAGTTCCTTTGCAGATGGTTGAGTTCTATTTGATCTTAGCAGCTGTTACTGCTGTCGCAGCTTCATTATTCTGGAAACTTTTGATAGGTTCTTTGGTAATGTTAATTTTTGGTTTTATGGGTGAAGCTGGAATAATGGCCGCTATGCCTGCTTTTATAATTGGAATGGCCGCTTGGTTATACATGATCTATGTTTTATATATGGGTGATGGTAAAACAGCTGTCGCTACAACTAGTGCTTCTGTCCAAACTGCATACAACACTATGATGTTAATCATCGTATTT LLTVPLQMVEFYLILAAVTAVAASLFWKLLIGSLVMLIFGFMGEAGIMAAMPAFIIGMAAWLYMIYVLYMGDGKTAVATTSASVQTAYNTMMLIIVF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTGACAGTTCCTTTGCAGATGGTTGAGTTCTATTTGATCTTAGCAGCT---------GTT---ACTGCTGTCGCAGCT---TCATTA------------------------------------TTCTGGAAA---CTTTTGATAGGTTCTTTGGTAATGTTAATTTTTGGTTTTATGGGTGAA---------GCT------------------GGA------ATA---------------------------------ATG------------------------------------------------------------------GCCGCT------------------ATGCCTGCT---TTTATAATTGGAATGGCCGCTTGGTTATACATGATCTATGTTTTA---------------TAT------ATG---GGTGAT---GGTAAAACAGCTGTCGCT------ACA---ACTAGTGCTTCTGTC---CAA---ACT---GCA---TAC---AAC---ACTATG---ATGTTAATCATCGTATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMVEFYLILAA---V-TAVAA-SL------------FWK-LLIGSLVMLIFGFMGE---A------G--I-----------M----------------------AA------MPA-FIIGMAAWLYMIYVL-----Y--M-GD-GKTAVA--T-TSASV-Q-T-A-Y-N-TM-MLIIVF-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ928362 [IV-Gamma5-SAR86e] PRGD_OTU033_60179683c5c805593796df35ac9f6ed8 gb|KJ928362| PRGD_OTU033_60179683c5c805593796df35ac9f6ed8, putative proteorhodopsin gene, partial cds. PRGD_OTU033_60179683c5c805593796df35ac9f6ed8, putative proteorhodopsin gene, partial cds. KJ928362 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683) TTGTTAACTGTGCCATTATTAATTATTGAGTTCTATCTAATCCTAAAAGCTGTGACTGACGTTGCTGCTTCACTATTCTACAAACTTTTTGTTGGTTCTATAGTGATGTTAGTGTTTGGTTACTTAGGTGAAGCTGGACTCATGAGTGCTATGCCAGCATTCATTGTCGGGATGTTAGCTTGGATATACATGATCCATACACTTTGGATGGGTGAAGGTGCGCAAGCAAGAAACGCATCAGGCAATGCTGCTGTTCAAACTGCCTACAACACTATGATGTGGATCATCATTGTT LLTVPLLIIEFYLILKAVTDVAASLFYKLFVGSIVMLVFGYLGEAGLMSAMPAFIVGMLAWIYMIHTLWMGEGAQARNASGNAAVQTAYNTMMWIIIV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTAACTGTGCCATTATTAATTATTGAGTTCTATCTAATCCTAAAAGCT---------GTG---ACTGACGTTGCTGCT---TCACTA------------------------------------TTCTACAAA---CTTTTTGTTGGTTCTATAGTGATGTTAGTGTTTGGTTACTTAGGTGAA---------GCT------------------GGA------CTC---------------------------------ATG------------------------------------------------------------------AGTGCT------------------ATGCCAGCA---TTCATTGTCGGGATGTTAGCTTGGATATACATGATCCATACACTT---------------TGG------ATG---GGTGAAGGTGCGCAAGCAAGAAACGCA------TCA---GGCAATGCTGCTGTT---CAA---ACT---GCC---TAC---AAC---ACTATG---ATGTGGATCATCATTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILKA---V-TDVAA-SL------------FYK-LFVGSIVMLVFGYLGE---A------G--L-----------M----------------------SA------MPA-FIVGMLAWIYMIHTL-----W--M-GEGAQARNA--S-GNAAV-Q-T-A-Y-N-TM-MWIIIV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ928375 [IV-Gamma5-SAR86e] PRGD_OTU033_b5a0845348e7e5591d8b4cdff1757146 gb|KJ928375| PRGD_OTU033_b5a0845348e7e5591d8b4cdff1757146, putative proteorhodopsin gene, partial cds. PRGD_OTU033_b5a0845348e7e5591d8b4cdff1757146, putative proteorhodopsin gene, partial cds. KJ928375 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGTTAACTGTGCCATTGTTGATTATTGAGTTCTACTTAATCCTAAAAGCTGTGACTGACGTTGCTGCTTCACTATTCTACAAACTTTTTGTTGGTTCTATAGTGATGTTAGTGTTTGGTTACTTAGGTGAAGCTGGACTCATGAGTGCTATGCCAGCATTTATTGTCGGGATGTTAGCTTGGATATACATGATCCATACACTTTGGATGGGTGAAGGAGCTCAAGCAAGAAACGCATCAGGCAATGCTGCTGTTCAAACTGCCTACAACACTATGATGTGGATCATCATTGTT LLTVPLLIIEFYLILKAVTDVAASLFYKLFVGSIVMLVFGYLGEAGLMSAMPAFIVGMLAWIYMIHTLWMGEGAQARNASGNAAVQTAYNTMMWIIIV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTAACTGTGCCATTGTTGATTATTGAGTTCTACTTAATCCTAAAAGCT---------GTG---ACTGACGTTGCTGCT---TCACTA------------------------------------TTCTACAAA---CTTTTTGTTGGTTCTATAGTGATGTTAGTGTTTGGTTACTTAGGTGAA---------GCT------------------GGA------CTC---------------------------------ATG------------------------------------------------------------------AGTGCT------------------ATGCCAGCA---TTTATTGTCGGGATGTTAGCTTGGATATACATGATCCATACACTT---------------TGG------ATG---GGTGAAGGAGCTCAAGCAAGAAACGCA------TCA---GGCAATGCTGCTGTT---CAA---ACT---GCC---TAC---AAC---ACTATG---ATGTGGATCATCATTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILKA---V-TDVAA-SL------------FYK-LFVGSIVMLVFGYLGE---A------G--L-----------M----------------------SA------MPA-FIVGMLAWIYMIHTL-----W--M-GEGAQARNA--S-GNAAV-Q-T-A-Y-N-TM-MWIIIV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ928356 [IV-Gamma5-SAR86e] PRGD_OTU033_1a542545a87611e0d5a306700d1355f7 gb|KJ928356| PRGD_OTU033_1a542545a87611e0d5a306700d1355f7, putative proteorhodopsin gene, partial cds. PRGD_OTU033_1a542545a87611e0d5a306700d1355f7, putative proteorhodopsin gene, partial cds. KJ928356 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683) TTGTTAACTGTGCCATTGTTGATTATTGAGTTCTACTTAATCCTAAAAGCTGTGACTGACGTTGCTGCTTCACTATTCTACAAACTTTTTGTTGGTTCTATAGTGATGTTAGTGTTTGGTTACTTAGGTGAAGCTGGACTCATGAGTGCTATGCCAGCATTTATTGTTGGGATGTTAGCTTGGATTTACATGATCCATACACTTTGGATGGGTGAAGGTGCGCAAGCAAGAAACGCATCAGGCAATGCTGCTGTTCAAACTGCCTACAACACTATGATGTGGATCATCATTGTT LLTVPLLIIEFYLILKAVTDVAASLFYKLFVGSIVMLVFGYLGEAGLMSAMPAFIVGMLAWIYMIHTLWMGEGAQARNASGNAAVQTAYNTMMWIIIV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTAACTGTGCCATTGTTGATTATTGAGTTCTACTTAATCCTAAAAGCT---------GTG---ACTGACGTTGCTGCT---TCACTA------------------------------------TTCTACAAA---CTTTTTGTTGGTTCTATAGTGATGTTAGTGTTTGGTTACTTAGGTGAA---------GCT------------------GGA------CTC---------------------------------ATG------------------------------------------------------------------AGTGCT------------------ATGCCAGCA---TTTATTGTTGGGATGTTAGCTTGGATTTACATGATCCATACACTT---------------TGG------ATG---GGTGAAGGTGCGCAAGCAAGAAACGCA------TCA---GGCAATGCTGCTGTT---CAA---ACT---GCC---TAC---AAC---ACTATG---ATGTGGATCATCATTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILKA---V-TDVAA-SL------------FYK-LFVGSIVMLVFGYLGE---A------G--L-----------M----------------------SA------MPA-FIVGMLAWIYMIHTL-----W--M-GEGAQARNA--S-GNAAV-Q-T-A-Y-N-TM-MWIIIV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ928374 [IV-Gamma5-SAR86e] PRGD_OTU033_aa48e98a8841e35df3265015f670d476 gb|KJ928374| PRGD_OTU033_aa48e98a8841e35df3265015f670d476, putative proteorhodopsin gene, partial cds. PRGD_OTU033_aa48e98a8841e35df3265015f670d476, putative proteorhodopsin gene, partial cds. KJ928374 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGTTAACTGTGCCATTGTTGATTATTGAGTTCTACTTAATCCTAAAAGCTGTGACTGATGTTGCTGCTTCACTATTCTATAAACTTTTTGTTGGTTCTATAGTGATGTTAGTGTTTGGTTACTTAGGTGAAGCTGGGCTCATGAGTGCTATGCCAGCATTTATTGTTGGGATGTTAGCTTGGATATACATGATCCATACACTTTGGATGGGTGAAGGTGCACAAGCAAGAAACGCATCAGGCAATGCTGCTGTTCAAACTGCCTACAACACTATGATGTGGATCATTATTGTT LLTVPLLIIEFYLILKAVTDVAASLFYKLFVGSIVMLVFGYLGEAGLMSAMPAFIVGMLAWIYMIHTLWMGEGAQARNASGNAAVQTAYNTMMWIIIV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTAACTGTGCCATTGTTGATTATTGAGTTCTACTTAATCCTAAAAGCT---------GTG---ACTGATGTTGCTGCT---TCACTA------------------------------------TTCTATAAA---CTTTTTGTTGGTTCTATAGTGATGTTAGTGTTTGGTTACTTAGGTGAA---------GCT------------------GGG------CTC---------------------------------ATG------------------------------------------------------------------AGTGCT------------------ATGCCAGCA---TTTATTGTTGGGATGTTAGCTTGGATATACATGATCCATACACTT---------------TGG------ATG---GGTGAAGGTGCACAAGCAAGAAACGCA------TCA---GGCAATGCTGCTGTT---CAA---ACT---GCC---TAC---AAC---ACTATG---ATGTGGATCATTATTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILKA---V-TDVAA-SL------------FYK-LFVGSIVMLVFGYLGE---A------G--L-----------M----------------------SA------MPA-FIVGMLAWIYMIHTL-----W--M-GEGAQARNA--S-GNAAV-Q-T-A-Y-N-TM-MWIIIV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ928355 [IV-Gamma5-SAR86e] PRGD_OTU033_076ac984fab7eedacd12f4973f61f735 gb|KJ928355| PRGD_OTU033_076ac984fab7eedacd12f4973f61f735, putative proteorhodopsin gene, partial cds. PRGD_OTU033_076ac984fab7eedacd12f4973f61f735, putative proteorhodopsin gene, partial cds. KJ928355 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGTTAACTGTGCCATTGTTGATTATTGAGTTCTACTTAATCCTAAAAGCTGTGACTGATGTTGCTGCTTCACTATTCTACAAACTTTTTGTTGGTTCTATAGTGATGTTAGTGTTTGGTTACTTAGGTGAAGCTGGACTCATGAGTGCTATGCCAGCATTTATTGTCGGGATGTTAGCTTGGATATACATGATCCATACACTTTGGATGGGTGAAGGTGCACAAGCAAGAAACGCATCAGGCAATGCTGCTGTTCAAACTGCCTACAACACCATGATGTGGATCATCATTGTT LLTVPLLIIEFYLILKAVTDVAASLFYKLFVGSIVMLVFGYLGEAGLMSAMPAFIVGMLAWIYMIHTLWMGEGAQARNASGNAAVQTAYNTMMWIIIV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTAACTGTGCCATTGTTGATTATTGAGTTCTACTTAATCCTAAAAGCT---------GTG---ACTGATGTTGCTGCT---TCACTA------------------------------------TTCTACAAA---CTTTTTGTTGGTTCTATAGTGATGTTAGTGTTTGGTTACTTAGGTGAA---------GCT------------------GGA------CTC---------------------------------ATG------------------------------------------------------------------AGTGCT------------------ATGCCAGCA---TTTATTGTCGGGATGTTAGCTTGGATATACATGATCCATACACTT---------------TGG------ATG---GGTGAAGGTGCACAAGCAAGAAACGCA------TCA---GGCAATGCTGCTGTT---CAA---ACT---GCC---TAC---AAC---ACCATG---ATGTGGATCATCATTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILKA---V-TDVAA-SL------------FYK-LFVGSIVMLVFGYLGE---A------G--L-----------M----------------------SA------MPA-FIVGMLAWIYMIHTL-----W--M-GEGAQARNA--S-GNAAV-Q-T-A-Y-N-TM-MWIIIV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ928352 [IV-Gamma5-SAR86e] PRGD_OTU033_otuREP_8fdf8b2aa09fe1ca0c26eb22330aa061 gb|KJ928352| PRGD_OTU033_otuREP_8fdf8b2aa09fe1ca0c26eb22330aa061, putative proteorhodopsin gene, partial cds. PRGD_OTU033_otuREP_8fdf8b2aa09fe1ca0c26eb22330aa061, putative proteorhodopsin gene, partial cds. KJ928352 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.935, 18.508), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTGTTAACTGTGCCATTGTTGATTATTGAGTTCTATTTAATCCTAAAAGCTGTGACTGATGTTGCTGCTTCACTATTCTATAAACTTTTTGTTGGTTCTATAGTAATGTTAGTGTTTGGTTACTTAGGTGAAGCTGGACTCATGAGTGCTATGCCAGCATTTATTGTCGGGATGTTAGCTTGGATATACATGATCCATACACTTTGGATGGGTGAAGGTGCACAAGCAAGAAACGCATCAGGCAATGCTGCTGTTCAAACTGCCTACAACACTATGATGTGGATCATCATTGTT LLTVPLLIIEFYLILKAVTDVAASLFYKLFVGSIVMLVFGYLGEAGLMSAMPAFIVGMLAWIYMIHTLWMGEGAQARNASGNAAVQTAYNTMMWIIIV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTAACTGTGCCATTGTTGATTATTGAGTTCTATTTAATCCTAAAAGCT---------GTG---ACTGATGTTGCTGCT---TCACTA------------------------------------TTCTATAAA---CTTTTTGTTGGTTCTATAGTAATGTTAGTGTTTGGTTACTTAGGTGAA---------GCT------------------GGA------CTC---------------------------------ATG------------------------------------------------------------------AGTGCT------------------ATGCCAGCA---TTTATTGTCGGGATGTTAGCTTGGATATACATGATCCATACACTT---------------TGG------ATG---GGTGAAGGTGCACAAGCAAGAAACGCA------TCA---GGCAATGCTGCTGTT---CAA---ACT---GCC---TAC---AAC---ACTATG---ATGTGGATCATCATTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILKA---V-TDVAA-SL------------FYK-LFVGSIVMLVFGYLGE---A------G--L-----------M----------------------SA------MPA-FIVGMLAWIYMIHTL-----W--M-GEGAQARNA--S-GNAAV-Q-T-A-Y-N-TM-MWIIIV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ928370 [IV-Gamma5-SAR86e] PRGD_OTU033_87189cfd12e744c957d6c27050d3fc5b gb|KJ928370| PRGD_OTU033_87189cfd12e744c957d6c27050d3fc5b, putative proteorhodopsin gene, partial cds. PRGD_OTU033_87189cfd12e744c957d6c27050d3fc5b, putative proteorhodopsin gene, partial cds. KJ928370 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTGCTAACAGTTCCATTGTTGATCATAGAATTCTATTTGATCCTCAAAGCTGTAACTAACGTTGCTGCCTCACTATTCTACAAACTTTTTGTAGGTTCTATAGTGATGTTAGTGTTTGGATACATGGGTGAAGCAGGACTGATGAGTGCTATGCCAGCATTTATTGTTGGAATGCTAGCTTGGATATACATGATCCACACTCTTTGGATGGGAGAAGGTGCTGAAGCAAGAAATGCATCAGGCAATGCTGCTGTTCAAACTGCATACAACACTATGATGTGGATCATCATTGTG LLTVPLLIIEFYLILKAVTNVAASLFYKLFVGSIVMLVFGYMGEAGLMSAMPAFIVGMLAWIYMIHTLWMGEGAEARNASGNAAVQTAYNTMMWIIIV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTAACAGTTCCATTGTTGATCATAGAATTCTATTTGATCCTCAAAGCT---------GTA---ACTAACGTTGCTGCC---TCACTA------------------------------------TTCTACAAA---CTTTTTGTAGGTTCTATAGTGATGTTAGTGTTTGGATACATGGGTGAA---------GCA------------------GGA------CTG---------------------------------ATG------------------------------------------------------------------AGTGCT------------------ATGCCAGCA---TTTATTGTTGGAATGCTAGCTTGGATATACATGATCCACACTCTT---------------TGG------ATG---GGAGAAGGTGCTGAAGCAAGAAATGCA------TCA---GGCAATGCTGCTGTT---CAA---ACT---GCA---TAC---AAC---ACTATG---ATGTGGATCATCATTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILKA---V-TNVAA-SL------------FYK-LFVGSIVMLVFGYMGE---A------G--L-----------M----------------------SA------MPA-FIVGMLAWIYMIHTL-----W--M-GEGAEARNA--S-GNAAV-Q-T-A-Y-N-TM-MWIIIV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ928376 [IV-Gamma5-SAR86e] PRGD_OTU033_c5f93e12ad1d304d353f13f5c086195e gb|KJ928376| PRGD_OTU033_c5f93e12ad1d304d353f13f5c086195e, putative proteorhodopsin gene, partial cds. PRGD_OTU033_c5f93e12ad1d304d353f13f5c086195e, putative proteorhodopsin gene, partial cds. KJ928376 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTGCTAACAGTTCCATTGTTGATCATAGAATTCTATTTGATCCTCAAAGCTGTAACTAATGTTGCTGCCTCACTATTCTATAAACTTTTTGTAGGTTCTATAGTGATGTTAGTGTTTGGTTACATGGGTGAAGCAGGACTGATGAGTGCTATGCCAGCATTTATTGTTGGAATGCTAGCTTGGATATACATGATCCACACCCTTTGGATGGGAGAAGGTGCTGAAGCAAGAAATGCATCAGGCAATGCTGCTGTTCAAACTGCATACAACACTATGATGTGGATTATCATTGTG LLTVPLLIIEFYLILKAVTNVAASLFYKLFVGSIVMLVFGYMGEAGLMSAMPAFIVGMLAWIYMIHTLWMGEGAEARNASGNAAVQTAYNTMMWIIIV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTAACAGTTCCATTGTTGATCATAGAATTCTATTTGATCCTCAAAGCT---------GTA---ACTAATGTTGCTGCC---TCACTA------------------------------------TTCTATAAA---CTTTTTGTAGGTTCTATAGTGATGTTAGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------CTG---------------------------------ATG------------------------------------------------------------------AGTGCT------------------ATGCCAGCA---TTTATTGTTGGAATGCTAGCTTGGATATACATGATCCACACCCTT---------------TGG------ATG---GGAGAAGGTGCTGAAGCAAGAAATGCA------TCA---GGCAATGCTGCTGTT---CAA---ACT---GCA---TAC---AAC---ACTATG---ATGTGGATTATCATTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILKA---V-TNVAA-SL------------FYK-LFVGSIVMLVFGYMGE---A------G--L-----------M----------------------SA------MPA-FIVGMLAWIYMIHTL-----W--M-GEGAEARNA--S-GNAAV-Q-T-A-Y-N-TM-MWIIIV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ928378 [IV-Gamma5-SAR86e] PRGD_OTU033_ea03119ba5556745fcce7ed4e2e1e62c gb|KJ928378| PRGD_OTU033_ea03119ba5556745fcce7ed4e2e1e62c, putative proteorhodopsin gene, partial cds. PRGD_OTU033_ea03119ba5556745fcce7ed4e2e1e62c, putative proteorhodopsin gene, partial cds. KJ928378 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) TTGCTAACAGTTCCATTGTTGATCATTGAATTCTATTTGATCCTCAAAGCTGTAACTAATGTTGCTGCCTCACTATTCTACAAACTTTTTGTAGGTTCTATAGTGATGTTGGTGTTTGGTTACATGGGTGAAGCAGGACTGATGAGCGCTATGCCAGCGTTTATTGTTGGGATGCTAGCTTGGATATACATGATCCACACCCTTTGGATGGGAGAAGGCGCTGAAGCAAGAAATGCATCAGGCAATGCTGCTGTTCAAACTGCATACAACACTATGATGTGGATCATCATTGTG LLTVPLLIIEFYLILKAVTNVAASLFYKLFVGSIVMLVFGYMGEAGLMSAMPAFIVGMLAWIYMIHTLWMGEGAEARNASGNAAVQTAYNTMMWIIIV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTAACAGTTCCATTGTTGATCATTGAATTCTATTTGATCCTCAAAGCT---------GTA---ACTAATGTTGCTGCC---TCACTA------------------------------------TTCTACAAA---CTTTTTGTAGGTTCTATAGTGATGTTGGTGTTTGGTTACATGGGTGAA---------GCA------------------GGA------CTG---------------------------------ATG------------------------------------------------------------------AGCGCT------------------ATGCCAGCG---TTTATTGTTGGGATGCTAGCTTGGATATACATGATCCACACCCTT---------------TGG------ATG---GGAGAAGGCGCTGAAGCAAGAAATGCA------TCA---GGCAATGCTGCTGTT---CAA---ACT---GCA---TAC---AAC---ACTATG---ATGTGGATCATCATTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILKA---V-TNVAA-SL------------FYK-LFVGSIVMLVFGYMGE---A------G--L-----------M----------------------SA------MPA-FIVGMLAWIYMIHTL-----W--M-GEGAEARNA--S-GNAAV-Q-T-A-Y-N-TM-MWIIIV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ928363 [IV-Gamma5-SAR86e] PRGD_OTU033_61def1efbf5a86ba10cc79fbb5d9cb48 gb|KJ928363| PRGD_OTU033_61def1efbf5a86ba10cc79fbb5d9cb48, putative proteorhodopsin gene, partial cds. PRGD_OTU033_61def1efbf5a86ba10cc79fbb5d9cb48, putative proteorhodopsin gene, partial cds. KJ928363 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTGCTCACAGTGCCATTGTTGATTATTGAATTCTATTTGATCCTTAAAGCTGTAACTAATGTTGCTGCTTCACTATTCTACAAACTTTTTGTAGGTTCTATAGTGATGCTAGTGTTTGGTTACATGGGAGAAGCAGGGCTAATGGGTGCTATGCCAGCATTTATTGTTGGGATGCTAGCTTGGATATACATGATCCATACACTTTGGATGGGTGAAGGTGCCGAAGCAAGAAACGCATCAGGCAATGCTGCTGTTCAAACTGCATACAACACTATGATGTGGATCATCATTGTG LLTVPLLIIEFYLILKAVTNVAASLFYKLFVGSIVMLVFGYMGEAGLMGAMPAFIVGMLAWIYMIHTLWMGEGAEARNASGNAAVQTAYNTMMWIIIV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTCACAGTGCCATTGTTGATTATTGAATTCTATTTGATCCTTAAAGCT---------GTA---ACTAATGTTGCTGCT---TCACTA------------------------------------TTCTACAAA---CTTTTTGTAGGTTCTATAGTGATGCTAGTGTTTGGTTACATGGGAGAA---------GCA------------------GGG------CTA---------------------------------ATG------------------------------------------------------------------GGTGCT------------------ATGCCAGCA---TTTATTGTTGGGATGCTAGCTTGGATATACATGATCCATACACTT---------------TGG------ATG---GGTGAAGGTGCCGAAGCAAGAAACGCA------TCA---GGCAATGCTGCTGTT---CAA---ACT---GCA---TAC---AAC---ACTATG---ATGTGGATCATCATTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILKA---V-TNVAA-SL------------FYK-LFVGSIVMLVFGYMGE---A------G--L-----------M----------------------GA------MPA-FIVGMLAWIYMIHTL-----W--M-GEGAEARNA--S-GNAAV-Q-T-A-Y-N-TM-MWIIIV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ928377 [IV-Gamma5-SAR86e] PRGD_OTU033_d042c87226be8cb6aff76dba3def0146 gb|KJ928377| PRGD_OTU033_d042c87226be8cb6aff76dba3def0146, putative proteorhodopsin gene, partial cds. PRGD_OTU033_d042c87226be8cb6aff76dba3def0146, putative proteorhodopsin gene, partial cds. KJ928377 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) TTACTCACAGTGCCATTGTTGATTATTGAGTTCTATTTGATCCTAAAAGCTGTAACTAATGTTGCTGCTTCATTATTCTACAAACTTTTTGTAGGTTCTATAGTGATGCTAGTGTTTGGTTACATGGGAGAATCAGGATTAATGGGTGCTATGCCAGCATTTATTGTTGGGATGCTAGCTTGGTTATACATGATCCATACACTTTGGATGGGTGAAGGTGCCGAAGCAAGAAACGCATCAGGCAATGCTGCTGTTCAAACTGCATACAACACTATGATGTGGATCATCATTGTG LLTVPLLIIEFYLILKAVTNVAASLFYKLFVGSIVMLVFGYMGESGLMGAMPAFIVGMLAWLYMIHTLWMGEGAEARNASGNAAVQTAYNTMMWIIIV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTCACAGTGCCATTGTTGATTATTGAGTTCTATTTGATCCTAAAAGCT---------GTA---ACTAATGTTGCTGCT---TCATTA------------------------------------TTCTACAAA---CTTTTTGTAGGTTCTATAGTGATGCTAGTGTTTGGTTACATGGGAGAA---------TCA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------GGTGCT------------------ATGCCAGCA---TTTATTGTTGGGATGCTAGCTTGGTTATACATGATCCATACACTT---------------TGG------ATG---GGTGAAGGTGCCGAAGCAAGAAACGCA------TCA---GGCAATGCTGCTGTT---CAA---ACT---GCA---TAC---AAC---ACTATG---ATGTGGATCATCATTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILKA---V-TNVAA-SL------------FYK-LFVGSIVMLVFGYMGE---S------G--L-----------M----------------------GA------MPA-FIVGMLAWLYMIHTL-----W--M-GEGAEARNA--S-GNAAV-Q-T-A-Y-N-TM-MWIIIV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ928361 [IV-Gamma5-SAR86e] PRGD_OTU033_5b7a432336c182c450bc29400f9ef099 gb|KJ928361| PRGD_OTU033_5b7a432336c182c450bc29400f9ef099, putative proteorhodopsin gene, partial cds. PRGD_OTU033_5b7a432336c182c450bc29400f9ef099, putative proteorhodopsin gene, partial cds. KJ928361 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTGCTAACTGTGCCATTGTTAATTATCGAGTTCTATTTAATCCTTAAAGCTGTGACTAATGTTGCTGCTTCACTATTCTACAAACTTTTTGTTGGTTCTATAGTGATGTTGGTATTTGGTTACATGGGTGAAGCAGGATTAATGGGTGCTATGCCAGCATTTATTGTTGGGATGCTAGCTTGGTTATACATGATCCATACACTATGGATGGGTGAAGGTGCCGAAGCAAGAAATGCATCAGGCAATGCTGCTGTTCAAACTGCTTACAACACTATGATGTGGATCATCATTGTG LLTVPLLIIEFYLILKAVTNVAASLFYKLFVGSIVMLVFGYMGEAGLMGAMPAFIVGMLAWLYMIHTLWMGEGAEARNASGNAAVQTAYNTMMWIIIV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTAACTGTGCCATTGTTAATTATCGAGTTCTATTTAATCCTTAAAGCT---------GTG---ACTAATGTTGCTGCT---TCACTA------------------------------------TTCTACAAA---CTTTTTGTTGGTTCTATAGTGATGTTGGTATTTGGTTACATGGGTGAA---------GCA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------GGTGCT------------------ATGCCAGCA---TTTATTGTTGGGATGCTAGCTTGGTTATACATGATCCATACACTA---------------TGG------ATG---GGTGAAGGTGCCGAAGCAAGAAATGCA------TCA---GGCAATGCTGCTGTT---CAA---ACT---GCT---TAC---AAC---ACTATG---ATGTGGATCATCATTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILKA---V-TNVAA-SL------------FYK-LFVGSIVMLVFGYMGE---A------G--L-----------M----------------------GA------MPA-FIVGMLAWLYMIHTL-----W--M-GEGAEARNA--S-GNAAV-Q-T-A-Y-N-TM-MWIIIV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ928353 [IV-Gamma5-SAR86e] PRGD_OTU033_045661dbc1e33b7a7ef0636f2d786baf gb|KJ928353| PRGD_OTU033_045661dbc1e33b7a7ef0636f2d786baf, putative proteorhodopsin gene, partial cds. PRGD_OTU033_045661dbc1e33b7a7ef0636f2d786baf, putative proteorhodopsin gene, partial cds. KJ928353 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTATTAACTGTGCCATTATTGATTATAGAGTTCTATTTAATCCTTAAAGCTGTAACTGATGTTGCTGCCTCGCTATTCTACAAACTTTTTGTAGGTTCGATAGTAATGTTGGTCTTTGGTTACATGGGTGAAGCAGGACTAATGGGTGCTATGCCAGCATTTATTGTTGGGATGCTAGCTTGGATATACATGATCCATACCCTTTGGATGGGAGAAGGTGCCGAAGCAAGAAATGCATCAGGTAACGCTGCTGTTCAAACTGCATACAACACTATGATGTGGATCATCATTGTG LLTVPLLIIEFYLILKAVTDVAASLFYKLFVGSIVMLVFGYMGEAGLMGAMPAFIVGMLAWIYMIHTLWMGEGAEARNASGNAAVQTAYNTMMWIIIV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACTGTGCCATTATTGATTATAGAGTTCTATTTAATCCTTAAAGCT---------GTA---ACTGATGTTGCTGCC---TCGCTA------------------------------------TTCTACAAA---CTTTTTGTAGGTTCGATAGTAATGTTGGTCTTTGGTTACATGGGTGAA---------GCA------------------GGA------CTA---------------------------------ATG------------------------------------------------------------------GGTGCT------------------ATGCCAGCA---TTTATTGTTGGGATGCTAGCTTGGATATACATGATCCATACCCTT---------------TGG------ATG---GGAGAAGGTGCCGAAGCAAGAAATGCA------TCA---GGTAACGCTGCTGTT---CAA---ACT---GCA---TAC---AAC---ACTATG---ATGTGGATCATCATTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILKA---V-TDVAA-SL------------FYK-LFVGSIVMLVFGYMGE---A------G--L-----------M----------------------GA------MPA-FIVGMLAWIYMIHTL-----W--M-GEGAEARNA--S-GNAAV-Q-T-A-Y-N-TM-MWIIIV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ928372 [IV-Gamma5-SAR86e] PRGD_OTU033_9f3670a793f64fd773ec52cbb3fe4689 gb|KJ928372| PRGD_OTU033_9f3670a793f64fd773ec52cbb3fe4689, putative proteorhodopsin gene, partial cds. PRGD_OTU033_9f3670a793f64fd773ec52cbb3fe4689, putative proteorhodopsin gene, partial cds. KJ928372 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTATTAACTGTGCCATTGTTGATTATAGAGTTCTATTTAATCCTTAAAGCTGTGACTGATGTTGCTGCCTCGCTATTCTACAAACTTTTTGTAGGTTCGATAGTGATGTTGGTCTTTGGTTACATGGGTGAAGCAGGACTAATGGGTGCTCTGCCAGCATTTATTATTGGGATGCTAGCTTGGATATACATGATCCATACCCTTTGGATGGGAGAAGGTGCCGAAGCAAGAAATGCATCAGGTAACGCTGCTGTTCAAACTGCATACAACACTATGATGTGGATCATCATTGTG LLTVPLLIIEFYLILKAVTDVAASLFYKLFVGSIVMLVFGYMGEAGLMGALPAFIIGMLAWIYMIHTLWMGEGAEARNASGNAAVQTAYNTMMWIIIV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACTGTGCCATTGTTGATTATAGAGTTCTATTTAATCCTTAAAGCT---------GTG---ACTGATGTTGCTGCC---TCGCTA------------------------------------TTCTACAAA---CTTTTTGTAGGTTCGATAGTGATGTTGGTCTTTGGTTACATGGGTGAA---------GCA------------------GGA------CTA---------------------------------ATG------------------------------------------------------------------GGTGCT------------------CTGCCAGCA---TTTATTATTGGGATGCTAGCTTGGATATACATGATCCATACCCTT---------------TGG------ATG---GGAGAAGGTGCCGAAGCAAGAAATGCA------TCA---GGTAACGCTGCTGTT---CAA---ACT---GCA---TAC---AAC---ACTATG---ATGTGGATCATCATTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILKA---V-TDVAA-SL------------FYK-LFVGSIVMLVFGYMGE---A------G--L-----------M----------------------GA------LPA-FIIGMLAWIYMIHTL-----W--M-GEGAEARNA--S-GNAAV-Q-T-A-Y-N-TM-MWIIIV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ928360 [IV-Gamma5-SAR86e] PRGD_OTU033_5294fd03149098246cde5418ff749a93 gb|KJ928360| PRGD_OTU033_5294fd03149098246cde5418ff749a93, putative proteorhodopsin gene, partial cds. PRGD_OTU033_5294fd03149098246cde5418ff749a93, putative proteorhodopsin gene, partial cds. KJ928360 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) TTATTAACTGTGCCATTGTTGATTATAGAGTTCTATTTAATCCTTAAAGCTGTAACTGATGTTGCTGCCTCGCTATTCTACAAACTTTTTGTAGGTTCGATAGTGATGTTGGTCTTTGGTTACATGGGTGAAGCAGGACTAATGGGTGCTATGCCAGCATTTATTGTTGGGATGCTAGCTTGGATATACATGATCCATACCCTTTGGATGGGAGAAGGTGCCGAAGCAAGAAATGCATCAGGTAACGCTGCTGTTCAAACTGCATACAACACTATGATGTGGATCATCATTGTG LLTVPLLIIEFYLILKAVTDVAASLFYKLFVGSIVMLVFGYMGEAGLMGAMPAFIVGMLAWIYMIHTLWMGEGAEARNASGNAAVQTAYNTMMWIIIV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACTGTGCCATTGTTGATTATAGAGTTCTATTTAATCCTTAAAGCT---------GTA---ACTGATGTTGCTGCC---TCGCTA------------------------------------TTCTACAAA---CTTTTTGTAGGTTCGATAGTGATGTTGGTCTTTGGTTACATGGGTGAA---------GCA------------------GGA------CTA---------------------------------ATG------------------------------------------------------------------GGTGCT------------------ATGCCAGCA---TTTATTGTTGGGATGCTAGCTTGGATATACATGATCCATACCCTT---------------TGG------ATG---GGAGAAGGTGCCGAAGCAAGAAATGCA------TCA---GGTAACGCTGCTGTT---CAA---ACT---GCA---TAC---AAC---ACTATG---ATGTGGATCATCATTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILKA---V-TDVAA-SL------------FYK-LFVGSIVMLVFGYMGE---A------G--L-----------M----------------------GA------MPA-FIVGMLAWIYMIHTL-----W--M-GEGAEARNA--S-GNAAV-Q-T-A-Y-N-TM-MWIIIV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ928358 [IV-Gamma5-SAR86e] PRGD_OTU033_26d7537523f38a22fe06b49abebc8041 gb|KJ928358| PRGD_OTU033_26d7537523f38a22fe06b49abebc8041, putative proteorhodopsin gene, partial cds. PRGD_OTU033_26d7537523f38a22fe06b49abebc8041, putative proteorhodopsin gene, partial cds. KJ928358 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) TTATTAACCGTGCCATTGTTGATTATAGAGTTCTATTTAATCCTTAAAGCTGTAACTGATGTTGCTGCCTCGCTATTCTACAAACTTTTTGTAGGTTCGATAGTGATGCTGGTCTTTGGTTACATGGGTGAAGCAGGACTAATGGGTGCTATGCCAGCATTTATTGTTGGGATGCTAGCTTGGATATACATGATCCATACCCTTTGGATGGGAGAAGGTGCCGAAGCAAGAAATGCATCAGGTAACGCTGCTGTTCAAACTGCATACAACACTATGATGTGGATCATCATTGTA LLTVPLLIIEFYLILKAVTDVAASLFYKLFVGSIVMLVFGYMGEAGLMGAMPAFIVGMLAWIYMIHTLWMGEGAEARNASGNAAVQTAYNTMMWIIIV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACCGTGCCATTGTTGATTATAGAGTTCTATTTAATCCTTAAAGCT---------GTA---ACTGATGTTGCTGCC---TCGCTA------------------------------------TTCTACAAA---CTTTTTGTAGGTTCGATAGTGATGCTGGTCTTTGGTTACATGGGTGAA---------GCA------------------GGA------CTA---------------------------------ATG------------------------------------------------------------------GGTGCT------------------ATGCCAGCA---TTTATTGTTGGGATGCTAGCTTGGATATACATGATCCATACCCTT---------------TGG------ATG---GGAGAAGGTGCCGAAGCAAGAAATGCA------TCA---GGTAACGCTGCTGTT---CAA---ACT---GCA---TAC---AAC---ACTATG---ATGTGGATCATCATTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILKA---V-TDVAA-SL------------FYK-LFVGSIVMLVFGYMGE---A------G--L-----------M----------------------GA------MPA-FIVGMLAWIYMIHTL-----W--M-GEGAEARNA--S-GNAAV-Q-T-A-Y-N-TM-MWIIIV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ928357 [IV-Gamma5-SAR86e] PRGD_OTU033_231d5f399e8e7539335d985a9063500c gb|KJ928357| PRGD_OTU033_231d5f399e8e7539335d985a9063500c, putative proteorhodopsin gene, partial cds. PRGD_OTU033_231d5f399e8e7539335d985a9063500c, putative proteorhodopsin gene, partial cds. KJ928357 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTATTAACTGTGCCATTGTTGATTATAGAGTTCTATTTAATCCTTAAAGCTGTAACTGATGTTGCTGCCTCACTATTCTACAAACTTTTTGTTGGTTCGATAGTGATGCTGGTCTTTGGTTACATGGGTGAAGCAGGACTAATGGGTGCTATGCCAGCATTTATTGTTGGGATGCTAGCTTGGATATACATGATCCATACCCTTTGGATGGGAGAAGGTGCCGAAGCAAGAAATGCATCAGGTAACGCTGCTGTTCAAACTGCATACAACACTATGATGTGGATCATCATTGTA LLTVPLLIIEFYLILKAVTDVAASLFYKLFVGSIVMLVFGYMGEAGLMGAMPAFIVGMLAWIYMIHTLWMGEGAEARNASGNAAVQTAYNTMMWIIIV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACTGTGCCATTGTTGATTATAGAGTTCTATTTAATCCTTAAAGCT---------GTA---ACTGATGTTGCTGCC---TCACTA------------------------------------TTCTACAAA---CTTTTTGTTGGTTCGATAGTGATGCTGGTCTTTGGTTACATGGGTGAA---------GCA------------------GGA------CTA---------------------------------ATG------------------------------------------------------------------GGTGCT------------------ATGCCAGCA---TTTATTGTTGGGATGCTAGCTTGGATATACATGATCCATACCCTT---------------TGG------ATG---GGAGAAGGTGCCGAAGCAAGAAATGCA------TCA---GGTAACGCTGCTGTT---CAA---ACT---GCA---TAC---AAC---ACTATG---ATGTGGATCATCATTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILKA---V-TDVAA-SL------------FYK-LFVGSIVMLVFGYMGE---A------G--L-----------M----------------------GA------MPA-FIVGMLAWIYMIHTL-----W--M-GEGAEARNA--S-GNAAV-Q-T-A-Y-N-TM-MWIIIV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ928368 [IV-Gamma5-SAR86e] PRGD_OTU033_7924f004ac4406359f5d2e054ea25d4c gb|KJ928368| PRGD_OTU033_7924f004ac4406359f5d2e054ea25d4c, putative proteorhodopsin gene, partial cds. PRGD_OTU033_7924f004ac4406359f5d2e054ea25d4c, putative proteorhodopsin gene, partial cds. KJ928368 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTACTAACAGTGCCATTGTTAATTATTGAGTTCTATTTAATCCTTAAAGCTGTAACTAATGTTGCTGCTTCACTATTCTACAAACTTTTTGTTGGTTCTATAGTGATGTTGGTATTTGGTTACATGGGTGAAGCAGGGCTAATGGGTGCTATGCCAGCATTTATTGTTGGGATGCTAGCTTGGTTATACATGATCCATACTCTTTGGATGGGTGAAGGTGCCGAAGCAAGAAATGCATCAGGCAACGCTGCTGTTCAAACTGCCTACAACACTATGATGTGGATCATCATTGTG LLTVPLLIIEFYLILKAVTNVAASLFYKLFVGSIVMLVFGYMGEAGLMGAMPAFIVGMLAWLYMIHTLWMGEGAEARNASGNAAVQTAYNTMMWIIIV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTAACAGTGCCATTGTTAATTATTGAGTTCTATTTAATCCTTAAAGCT---------GTA---ACTAATGTTGCTGCT---TCACTA------------------------------------TTCTACAAA---CTTTTTGTTGGTTCTATAGTGATGTTGGTATTTGGTTACATGGGTGAA---------GCA------------------GGG------CTA---------------------------------ATG------------------------------------------------------------------GGTGCT------------------ATGCCAGCA---TTTATTGTTGGGATGCTAGCTTGGTTATACATGATCCATACTCTT---------------TGG------ATG---GGTGAAGGTGCCGAAGCAAGAAATGCA------TCA---GGCAACGCTGCTGTT---CAA---ACT---GCC---TAC---AAC---ACTATG---ATGTGGATCATCATTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILKA---V-TNVAA-SL------------FYK-LFVGSIVMLVFGYMGE---A------G--L-----------M----------------------GA------MPA-FIVGMLAWLYMIHTL-----W--M-GEGAEARNA--S-GNAAV-Q-T-A-Y-N-TM-MWIIIV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ928354 [IV-Gamma5-SAR86e] PRGD_OTU033_05f01cef4aeb071b55a15979912aa212 gb|KJ928354| PRGD_OTU033_05f01cef4aeb071b55a15979912aa212, putative proteorhodopsin gene, partial cds. PRGD_OTU033_05f01cef4aeb071b55a15979912aa212, putative proteorhodopsin gene, partial cds. KJ928354 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683) TTGCTAACAGTACCATTGTTAATTATTGAGTTCTATTTAATCCTAAAAGCTGTGACTGATGTTGCTGCCTCACTATTCTATAAACTTTTTGTTGGTTCGATAGTGATGTTGGTATTTGGTTACATGGGTGAAGCAGGAATAATGAGTGCTATGCCAGCATTTATTGTCGGGATGTTAGCTTGGATATACATGATCCATACACTTTGGATGGGTGAAGGTGCTGAGGCTAGAAATGCTTCTGGTAACGCTGCTGTGCAAACTGCTTACAACACCATGATGTGGATCATCATAGTG LLTVPLLIIEFYLILKAVTDVAASLFYKLFVGSIVMLVFGYMGEAGIMSAMPAFIVGMLAWIYMIHTLWMGEGAEARNASGNAAVQTAYNTMMWIIIV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTAACAGTACCATTGTTAATTATTGAGTTCTATTTAATCCTAAAAGCT---------GTG---ACTGATGTTGCTGCC---TCACTA------------------------------------TTCTATAAA---CTTTTTGTTGGTTCGATAGTGATGTTGGTATTTGGTTACATGGGTGAA---------GCA------------------GGA------ATA---------------------------------ATG------------------------------------------------------------------AGTGCT------------------ATGCCAGCA---TTTATTGTCGGGATGTTAGCTTGGATATACATGATCCATACACTT---------------TGG------ATG---GGTGAAGGTGCTGAGGCTAGAAATGCT------TCT---GGTAACGCTGCTGTG---CAA---ACT---GCT---TAC---AAC---ACCATG---ATGTGGATCATCATAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILKA---V-TDVAA-SL------------FYK-LFVGSIVMLVFGYMGE---A------G--I-----------M----------------------SA------MPA-FIVGMLAWIYMIHTL-----W--M-GEGAEARNA--S-GNAAV-Q-T-A-Y-N-TM-MWIIIV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ928365 [IV-Gamma5-SAR86e] PRGD_OTU033_6da5d127e26db94cf081c13f65bbb584 gb|KJ928365| PRGD_OTU033_6da5d127e26db94cf081c13f65bbb584, putative proteorhodopsin gene, partial cds. PRGD_OTU033_6da5d127e26db94cf081c13f65bbb584, putative proteorhodopsin gene, partial cds. KJ928365 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683) CTACTAACAGTGCCATTGTTAATTATTGAGTTCTATTTAATCCTTAAAGCTGTAACTAATGTTGCTGCTTCACTATTCTACAAACTTTTTGTTGGTTCTATAGTGATGCTAGTGTTTGGTTACATGGGCGAAGCAGGAATAATGAGCGCAATGCCAGCATTTATTGTTGGAATGTTAGCTTGGTTATACATGATCCATACACTTTGGATGGGTGAAGGTGCTGAGGCTAGAAATGCTTCTGGCAACGCTGCCGTGCAAACTGCTTATAACACTATGATGTGGATCATCATC LLTVPLLIIEFYLILKAVTNVAASLFYKLFVGSIVMLVFGYMGEAGIMSAMPAFIVGMLAWLYMIHTLWMGEGAEARNASGNAAVQTAYNTMMWIII ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTAACAGTGCCATTGTTAATTATTGAGTTCTATTTAATCCTTAAAGCT---------GTA---ACTAATGTTGCTGCT---TCACTA------------------------------------TTCTACAAA---CTTTTTGTTGGTTCTATAGTGATGCTAGTGTTTGGTTACATGGGCGAA---------GCA------------------GGA------ATA---------------------------------ATG------------------------------------------------------------------AGCGCA------------------ATGCCAGCA---TTTATTGTTGGAATGTTAGCTTGGTTATACATGATCCATACACTT---------------TGG------ATG---GGTGAAGGTGCTGAGGCTAGAAATGCT------TCT---GGCAACGCTGCCGTG---CAA---ACT---GCT---TAT---AAC---ACTATG---ATGTGGATCATCATC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILKA---V-TNVAA-SL------------FYK-LFVGSIVMLVFGYMGE---A------G--I-----------M----------------------SA------MPA-FIVGMLAWLYMIHTL-----W--M-GEGAEARNA--S-GNAAV-Q-T-A-Y-N-TM-MWIII--------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ928371 [IV-Gamma5-SAR86e] PRGD_OTU033_8a60ba581a11edf6ccd460c1eb4e5970 gb|KJ928371| PRGD_OTU033_8a60ba581a11edf6ccd460c1eb4e5970, putative proteorhodopsin gene, partial cds. PRGD_OTU033_8a60ba581a11edf6ccd460c1eb4e5970, putative proteorhodopsin gene, partial cds. KJ928371 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGCTAACAGTGCCATTGTTAATTATTGAGTTCTATTTAATCCTGAAAGCTGTAACTAATGTTGCTGCTTCACTATTCTACAAACTATTTGTTGGTTCTATAGTGATGCTAGTGTTTGGTTACATGGGCGAAGCGGGAATAATGAGCGCAATGCCAGCATTTATTGTTGGAATGTTAGCTTGGTTATACATGATCCATACACTTTGGATGGGTGAAGGTGCTGAAGCTAGAAATGCTTCTGGCAACGCTGCCGTGCAAACTGCTTATAACACTATGATGTGGATCATCATTGTG LLTVPLLIIEFYLILKAVTNVAASLFYKLFVGSIVMLVFGYMGEAGIMSAMPAFIVGMLAWLYMIHTLWMGEGAEARNASGNAAVQTAYNTMMWIIIV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTAACAGTGCCATTGTTAATTATTGAGTTCTATTTAATCCTGAAAGCT---------GTA---ACTAATGTTGCTGCT---TCACTA------------------------------------TTCTACAAA---CTATTTGTTGGTTCTATAGTGATGCTAGTGTTTGGTTACATGGGCGAA---------GCG------------------GGA------ATA---------------------------------ATG------------------------------------------------------------------AGCGCA------------------ATGCCAGCA---TTTATTGTTGGAATGTTAGCTTGGTTATACATGATCCATACACTT---------------TGG------ATG---GGTGAAGGTGCTGAAGCTAGAAATGCT------TCT---GGCAACGCTGCCGTG---CAA---ACT---GCT---TAT---AAC---ACTATG---ATGTGGATCATCATTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILKA---V-TNVAA-SL------------FYK-LFVGSIVMLVFGYMGE---A------G--I-----------M----------------------SA------MPA-FIVGMLAWLYMIHTL-----W--M-GEGAEARNA--S-GNAAV-Q-T-A-Y-N-TM-MWIIIV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ928366 [IV-Gamma5-SAR86e] PRGD_OTU033_7239d094466a60b9901a5e8947b2cadf gb|KJ928366| PRGD_OTU033_7239d094466a60b9901a5e8947b2cadf, putative proteorhodopsin gene, partial cds. PRGD_OTU033_7239d094466a60b9901a5e8947b2cadf, putative proteorhodopsin gene, partial cds. KJ928366 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTGCTAACTGTGCCATTGTTAATTATCGAGTTCTACTTAATTCTTAAAGCTGTTACTAACGTTGCAGCATCTCTATTCTACAAACTGCTAATAGGTTCTTTGGTGATGCTTATATTTGGTTATTTGGGTGAAGCAAAAGAACTTCCCTATTTGCCTGCGTTTGTTGTTGGAATGCTAGCATGGATATACATGATCTATACTTTATGGATGGGTGAAGGTGCTCAGGCCAGAAATGCCTCCGGCAATGCTGCTGTAACATCTGCTTATAATACTATGATGTGGATTATCATTGTT LLTVPLLIIEFYLILKAVTNVAASLFYKLLIGSLVMLIFGYLGEAKELPYLPAFVVGMLAWIYMIYTLWMGEGAQARNASGNAAVTSAYNTMMWIIIV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTAACTGTGCCATTGTTAATTATCGAGTTCTACTTAATTCTTAAAGCT---------GTT---ACTAACGTTGCAGCA---TCTCTA------------------------------------TTCTACAAA---CTGCTAATAGGTTCTTTGGTGATGCTTATATTTGGTTATTTGGGTGAA---------GCA------------------AAA------GAA---------------------------------CTT------------------------------------------------------------------CCCTAT------------------TTGCCTGCG---TTTGTTGTTGGAATGCTAGCATGGATATACATGATCTATACTTTA---------------TGG------ATG---GGTGAAGGTGCTCAGGCCAGAAATGCC------TCC---GGCAATGCTGCTGTA---ACA---TCT---GCT---TAT---AAT---ACTATG---ATGTGGATTATCATTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILKA---V-TNVAA-SL------------FYK-LLIGSLVMLIFGYLGE---A------K--E-----------L----------------------PY------LPA-FVVGMLAWIYMIYTL-----W--M-GEGAQARNA--S-GNAAV-T-S-A-Y-N-TM-MWIIIV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ928373 [IV-Gamma5-SAR86e] PRGD_OTU033_a6b52e64bf4771edab81b6ff2d4570fa gb|KJ928373| PRGD_OTU033_a6b52e64bf4771edab81b6ff2d4570fa, putative proteorhodopsin gene, partial cds. PRGD_OTU033_a6b52e64bf4771edab81b6ff2d4570fa, putative proteorhodopsin gene, partial cds. KJ928373 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGCTAACTGTGCCATTGTTAATTATCGAGTTCTACTTGATTCTTAAAGCTGTTACTGACGTTGCAGCATCTCTATTCTACAAACTACTAGTAGGTTCTTTGGTGATGCTTGTATTTGGTTACATGGGTGAAGCAAAGATACTTCCATATATGCCTGCGTTTATTGTGGGAATGCTAGCGTGGATATACATGATCCATACTTTATGGATGGGTGAAGGTGCTCAGGCTAGAAATGCCGCCGGCAACGCTGCTGTAACATCTGCTTATAACACTATGATGTGGATTATTATTGTT LLTVPLLIIEFYLILKAVTDVAASLFYKLLVGSLVMLVFGYMGEAKILPYMPAFIVGMLAWIYMIHTLWMGEGAQARNAAGNAAVTSAYNTMMWIIIV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTAACTGTGCCATTGTTAATTATCGAGTTCTACTTGATTCTTAAAGCT---------GTT---ACTGACGTTGCAGCA---TCTCTA------------------------------------TTCTACAAA---CTACTAGTAGGTTCTTTGGTGATGCTTGTATTTGGTTACATGGGTGAA---------GCA------------------AAG------ATA---------------------------------CTT------------------------------------------------------------------CCATAT------------------ATGCCTGCG---TTTATTGTGGGAATGCTAGCGTGGATATACATGATCCATACTTTA---------------TGG------ATG---GGTGAAGGTGCTCAGGCTAGAAATGCC------GCC---GGCAACGCTGCTGTA---ACA---TCT---GCT---TAT---AAC---ACTATG---ATGTGGATTATTATTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILKA---V-TDVAA-SL------------FYK-LLVGSLVMLVFGYMGE---A------K--I-----------L----------------------PY------MPA-FIVGMLAWIYMIHTL-----W--M-GEGAQARNA--A-GNAAV-T-S-A-Y-N-TM-MWIIIV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ928369 [IV-Gamma5-SAR86e] PRGD_OTU033_7b56d98b606c2928c699a3ace432b837 gb|KJ928369| PRGD_OTU033_7b56d98b606c2928c699a3ace432b837, putative proteorhodopsin gene, partial cds. PRGD_OTU033_7b56d98b606c2928c699a3ace432b837, putative proteorhodopsin gene, partial cds. KJ928369 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTACTAACTGTGCCGTTGTTAATTATCGAGTTCTACTTAATCCTCAAAGCTGTTACTAACGTTGCAACGTCTCTATTTTACAAACTGTTAATAGGCTCTTTGGTGATGCTTGGATTTGGCTATATGGGTGAAGCAAAAATACTTCCGTATTTGCCTGCGTTTATTGTTGGAATGCTAGCTTGGTTATACATGATCCATACTTTATGGATGGGTGAAGGTGCTGAGGCTAGAAATGCCTCCGGCAATGCTGCGGTAACATCTGCTTATAACACTATGATGTGGATCATCATCGTT LLTVPLLIIEFYLILKAVTNVATSLFYKLLIGSLVMLGFGYMGEAKILPYLPAFIVGMLAWLYMIHTLWMGEGAEARNASGNAAVTSAYNTMMWIIIV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTAACTGTGCCGTTGTTAATTATCGAGTTCTACTTAATCCTCAAAGCT---------GTT---ACTAACGTTGCAACG---TCTCTA------------------------------------TTTTACAAA---CTGTTAATAGGCTCTTTGGTGATGCTTGGATTTGGCTATATGGGTGAA---------GCA------------------AAA------ATA---------------------------------CTT------------------------------------------------------------------CCGTAT------------------TTGCCTGCG---TTTATTGTTGGAATGCTAGCTTGGTTATACATGATCCATACTTTA---------------TGG------ATG---GGTGAAGGTGCTGAGGCTAGAAATGCC------TCC---GGCAATGCTGCGGTA---ACA---TCT---GCT---TAT---AAC---ACTATG---ATGTGGATCATCATCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILKA---V-TNVAT-SL------------FYK-LLIGSLVMLGFGYMGE---A------K--I-----------L----------------------PY------LPA-FIVGMLAWLYMIHTL-----W--M-GEGAEARNA--S-GNAAV-T-S-A-Y-N-TM-MWIIIV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ928359 [IV-Gamma5-SAR86e] PRGD_OTU033_3e0696cb574062149745c572251d5483 gb|KJ928359| PRGD_OTU033_3e0696cb574062149745c572251d5483, putative proteorhodopsin gene, partial cds. PRGD_OTU033_3e0696cb574062149745c572251d5483, putative proteorhodopsin gene, partial cds. KJ928359 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), Indian Ocean (-23.5956, 69.0419) TTATTAACTGTGCCGTTATTGATTATTGAATTCTATTTAATCCTAAAAGCTGTAACTAACGTTGCTGCATCATTGTTCTACAAGTTATTTGTTGGATCAATCGTGATGCTTGTGTTTGGTTACATGGGTGAATCTGGACTGATGGCTGCATTGCCTGCATTTGCTGTTGGAATGGCTGCTTGGCTTTACATTATCCATACATTATGGATGGGTGAAGGCGCCGAGGCGAGAAATGCTTCTGCTAATGCTGCTGTGTCAACCGCATACAACACTATGATGTGGATCATCATTGTT LLTVPLLIIEFYLILKAVTNVAASLFYKLFVGSIVMLVFGYMGESGLMAALPAFAVGMAAWLYIIHTLWMGEGAEARNASANAAVSTAYNTMMWIIIV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACTGTGCCGTTATTGATTATTGAATTCTATTTAATCCTAAAAGCT---------GTA---ACTAACGTTGCTGCA---TCATTG------------------------------------TTCTACAAG---TTATTTGTTGGATCAATCGTGATGCTTGTGTTTGGTTACATGGGTGAA---------TCT------------------GGA------CTG---------------------------------ATG------------------------------------------------------------------GCTGCA------------------TTGCCTGCA---TTTGCTGTTGGAATGGCTGCTTGGCTTTACATTATCCATACATTA---------------TGG------ATG---GGTGAAGGCGCCGAGGCGAGAAATGCT------TCT---GCTAATGCTGCTGTG---TCA---ACC---GCA---TAC---AAC---ACTATG---ATGTGGATCATCATTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILKA---V-TNVAA-SL------------FYK-LFVGSIVMLVFGYMGE---S------G--L-----------M----------------------AA------LPA-FAVGMAAWLYIIHTL-----W--M-GEGAEARNA--S-ANAAV-S-T-A-Y-N-TM-MWIIIV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ928367 [IV-Gamma5-SAR86e] PRGD_OTU033_78b4442773e20e4e78155a9b4a97ae96 gb|KJ928367| PRGD_OTU033_78b4442773e20e4e78155a9b4a97ae96, putative proteorhodopsin gene, partial cds. PRGD_OTU033_78b4442773e20e4e78155a9b4a97ae96, putative proteorhodopsin gene, partial cds. KJ928367 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683) TTATTAACTGTGCCGTTATTGATTATTGAATTCTATTTAATCCTAAAAGCTGTAACTAACGTTGCTGCATCATTGTTCTACAAGTTATTTGTTGGATCAATCGTGATGCTTGTGTTTGGTTACATGGGTGAATCTGGAATAATGAGTGCAATGCCTGCATTTATTGTTGGAATGCTTGCTTGGTTATACATTATCCATACATTATGGATGGGTGAAGGCGCCGAAGCTAGAAATGCTTCTGCTAATGCTGCTGTATCAACTGCATACAACACTATGATGTGGATCATCATTGTT LLTVPLLIIEFYLILKAVTNVAASLFYKLFVGSIVMLVFGYMGESGIMSAMPAFIVGMLAWLYIIHTLWMGEGAEARNASANAAVSTAYNTMMWIIIV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACTGTGCCGTTATTGATTATTGAATTCTATTTAATCCTAAAAGCT---------GTA---ACTAACGTTGCTGCA---TCATTG------------------------------------TTCTACAAG---TTATTTGTTGGATCAATCGTGATGCTTGTGTTTGGTTACATGGGTGAA---------TCT------------------GGA------ATA---------------------------------ATG------------------------------------------------------------------AGTGCA------------------ATGCCTGCA---TTTATTGTTGGAATGCTTGCTTGGTTATACATTATCCATACATTA---------------TGG------ATG---GGTGAAGGCGCCGAAGCTAGAAATGCT------TCT---GCTAATGCTGCTGTA---TCA---ACT---GCA---TAC---AAC---ACTATG---ATGTGGATCATCATTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILKA---V-TNVAA-SL------------FYK-LFVGSIVMLVFGYMGE---S------G--I-----------M----------------------SA------MPA-FIVGMLAWLYIIHTL-----W--M-GEGAEARNA--S-ANAAV-S-T-A-Y-N-TM-MWIIIV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ928379 [IV-Gamma5-SAR86e] PRGD_OTU033_f7b64abd82a93129989bcfccccbae111 gb|KJ928379| PRGD_OTU033_f7b64abd82a93129989bcfccccbae111, putative proteorhodopsin gene, partial cds. PRGD_OTU033_f7b64abd82a93129989bcfccccbae111, putative proteorhodopsin gene, partial cds. KJ928379 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185) TTATTAACTGTGCCGTTATTGATTATTGAATTCTATTTAATCCTAAAAGCTGTAACTAACGTTGCTGCATCATTGTTCTACAAGTTATTTGTTGGATCAATCGTGATGCTTGTGTTTGGTTACATGGGTGAATCTGGAATAATGAGTGCAATGCCTGCATTTATTGTTGGAATGCTTGCTTGGTTATACATTATCCATACATTATGGATGGGTGAAGGCGCCGAGGCGAGAAATGCTTCTGCTAATGCCGCTGTGTCAACTGCATACAACACTATGATGTGGATCATCATTGTT LLTVPLLIIEFYLILKAVTNVAASLFYKLFVGSIVMLVFGYMGESGIMSAMPAFIVGMLAWLYIIHTLWMGEGAEARNASANAAVSTAYNTMMWIIIV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACTGTGCCGTTATTGATTATTGAATTCTATTTAATCCTAAAAGCT---------GTA---ACTAACGTTGCTGCA---TCATTG------------------------------------TTCTACAAG---TTATTTGTTGGATCAATCGTGATGCTTGTGTTTGGTTACATGGGTGAA---------TCT------------------GGA------ATA---------------------------------ATG------------------------------------------------------------------AGTGCA------------------ATGCCTGCA---TTTATTGTTGGAATGCTTGCTTGGTTATACATTATCCATACATTA---------------TGG------ATG---GGTGAAGGCGCCGAGGCGAGAAATGCT------TCT---GCTAATGCCGCTGTG---TCA---ACT---GCA---TAC---AAC---ACTATG---ATGTGGATCATCATTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILKA---V-TNVAA-SL------------FYK-LFVGSIVMLVFGYMGE---S------G--I-----------M----------------------SA------MPA-FIVGMLAWLYIIHTL-----W--M-GEGAEARNA--S-ANAAV-S-T-A-Y-N-TM-MWIIIV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ928364 [IV-Gamma5-SAR86e] PRGD_OTU033_62624bc318cb0c9f146897f95167258a gb|KJ928364| PRGD_OTU033_62624bc318cb0c9f146897f95167258a, putative proteorhodopsin gene, partial cds. PRGD_OTU033_62624bc318cb0c9f146897f95167258a, putative proteorhodopsin gene, partial cds. KJ928364 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683) TTGTTAACTGTGCCGTTATTAATTATTGAATTCTACTTAATCCTAAAAGCTGTAACTAACGTTGCTGCATCTTTGTTCTACAAGTTATTTGTTGGATCAATCGTGATGCTTGTGTTCGGTTACATGGGTGAATCTGGAATAATGAGTGCGATGCCTGCGTTTATTATTGGGATGGCTGCTTGGCTTTACATGATCCATACATTATGGATGGGTGAAGGCGCCGAGGCTAGAAATGCTTCTGGTAATGCTGCTGTGTCAACTGCATACAACACTATGATGTGGATCATCATTGTT LLTVPLLIIEFYLILKAVTNVAASLFYKLFVGSIVMLVFGYMGESGIMSAMPAFIIGMAAWLYMIHTLWMGEGAEARNASGNAAVSTAYNTMMWIIIV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTAACTGTGCCGTTATTAATTATTGAATTCTACTTAATCCTAAAAGCT---------GTA---ACTAACGTTGCTGCA---TCTTTG------------------------------------TTCTACAAG---TTATTTGTTGGATCAATCGTGATGCTTGTGTTCGGTTACATGGGTGAA---------TCT------------------GGA------ATA---------------------------------ATG------------------------------------------------------------------AGTGCG------------------ATGCCTGCG---TTTATTATTGGGATGGCTGCTTGGCTTTACATGATCCATACATTA---------------TGG------ATG---GGTGAAGGCGCCGAGGCTAGAAATGCT------TCT---GGTAATGCTGCTGTG---TCA---ACT---GCA---TAC---AAC---ACTATG---ATGTGGATCATCATTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILKA---V-TNVAA-SL------------FYK-LFVGSIVMLVFGYMGE---S------G--I-----------M----------------------SA------MPA-FIIGMAAWLYMIHTL-----W--M-GEGAEARNA--S-GNAAV-S-T-A-Y-N-TM-MWIIIV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ929748 [IV-Gamma5-SAR86e] PRGD_OTU226_otuREP_2ceab20da32a7a9ec2898c3fd4d7d28c gb|KJ929748| PRGD_OTU226_otuREP_2ceab20da32a7a9ec2898c3fd4d7d28c, putative proteorhodopsin gene, partial cds. PRGD_OTU226_otuREP_2ceab20da32a7a9ec2898c3fd4d7d28c, putative proteorhodopsin gene, partial cds. KJ929748 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683) TTGCTAACTGTGCCATTGTTAATTATTGAGTTCTATTTAATCCTGAAAGCTGTGACTAACGTTGCTGCCTCATTATTCTATAAGCTATTTGTAGGTTCAATTGTCATGCTTGGGTTTGGTTACGCTGGAGAAGCTGAGCATATGAATCAAATGATTGCATTTGTAATCGGAGTGTCTGCTTGGCTTTACATGATCTATACATTATGGTTCGGTGAAGGCGCTGCAGCTAGAAATGCTTCAGGCAATGCTGCCGTTACAACCGCGTATAACACTATGATGTGGATCATCATTGTG LLTVPLLIIEFYLILKAVTNVAASLFYKLFVGSIVMLGFGYAGEAEHMNQMIAFVIGVSAWLYMIYTLWFGEGAAARNASGNAAVTTAYNTMMWIIIV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTAACTGTGCCATTGTTAATTATTGAGTTCTATTTAATCCTGAAAGCT---------GTG---ACTAACGTTGCTGCC---TCATTA------------------------------------TTCTATAAG---CTATTTGTAGGTTCAATTGTCATGCTTGGGTTTGGTTACGCTGGAGAA---------GCT------------------GAG------CAT---------------------------------ATG------------------------------------------------------------------AATCAA------------------ATGATTGCA---TTTGTAATCGGAGTGTCTGCTTGGCTTTACATGATCTATACATTA---------------TGG------TTC---GGTGAAGGCGCTGCAGCTAGAAATGCT------TCA---GGCAATGCTGCCGTT---ACA---ACC---GCG---TAT---AAC---ACTATG---ATGTGGATCATCATTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILKA---V-TNVAA-SL------------FYK-LFVGSIVMLGFGYAGE---A------E--H-----------M----------------------NQ------MIA-FVIGVSAWLYMIYTL-----W--F-GEGAAARNA--S-GNAAV-T-T-A-Y-N-TM-MWIIIV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86e]_KJ929749 [IV-Gamma5-SAR86e] PRGD_OTU226_9e0f9bb717425ba5cf0dd65d1bb97298 gb|KJ929749| PRGD_OTU226_9e0f9bb717425ba5cf0dd65d1bb97298, putative proteorhodopsin gene, partial cds. PRGD_OTU226_9e0f9bb717425ba5cf0dd65d1bb97298, putative proteorhodopsin gene, partial cds. KJ929749 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_E-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_E-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175) TTGCTAACTGTGCCATTGTTAATCATTGAGTTCTATTTAATCCTGAAAGCTGTTACTAACGTTGCTGCCTCATTATTCTATAAACTATTTGTAGGTTCAATTGTCATGCTTGGGTTCGGTTACGCTGGAGAAGCTGAGCATATGAATCAATGGATTGCATTTGTAATCGGAGTGTCTGCTTGGCTTTACATGATCTATACATTATGGTTCGGTGAAGGCGCTGCAGCTAGAAACGCTTCAGGCAATGCTGCCGTTACAACCGCGTATAACACTATGATGTGGATCATCATCGTG LLTVPLLIIEFYLILKAVTNVAASLFYKLFVGSIVMLGFGYAGEAEHMNQWIAFVIGVSAWLYMIYTLWFGEGAAARNASGNAAVTTAYNTMMWIIIV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTAACTGTGCCATTGTTAATCATTGAGTTCTATTTAATCCTGAAAGCT---------GTT---ACTAACGTTGCTGCC---TCATTA------------------------------------TTCTATAAA---CTATTTGTAGGTTCAATTGTCATGCTTGGGTTCGGTTACGCTGGAGAA---------GCT------------------GAG------CAT---------------------------------ATG------------------------------------------------------------------AATCAA------------------TGGATTGCA---TTTGTAATCGGAGTGTCTGCTTGGCTTTACATGATCTATACATTA---------------TGG------TTC---GGTGAAGGCGCTGCAGCTAGAAACGCT------TCA---GGCAATGCTGCCGTT---ACA---ACC---GCG---TAT---AAC---ACTATG---ATGTGGATCATCATCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILKA---V-TNVAA-SL------------FYK-LFVGSIVMLGFGYAGE---A------E--H-----------M----------------------NQ------WIA-FVIGVSAWLYMIYTL-----W--F-GEGAAARNA--S-GNAAV-T-T-A-Y-N-TM-MWIIIV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_KJ929077 [IV-Gamma5-SAR86a] PRGD_OTU073_b2a783f1c4686e954ad385f675a50628 gb|KJ929077| PRGD_OTU073_b2a783f1c4686e954ad385f675a50628, putative proteorhodopsin gene, partial cds. PRGD_OTU073_b2a783f1c4686e954ad385f675a50628, putative proteorhodopsin gene, partial cds. KJ929077 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTGTGTACGAATGTTAGTTCAGGTTTATTCTGGAGACTATTAGTAGCATCACTTGTTATGCTTGTTGGTGGTTTCATAGGAGAAACTGGCGGCAATGCGATGGTATGCGGTGTTATAGCTACTGCAGCTTGGTTATATATTATCTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCTGCAGCACAAAGTGCTTTCGGTACAATTAGATTAATTGTTACCGTT LITVPLQIIEFYLILKVCTNVSSGLFWRLLVASLVMLVGGFIGETGGNAMVCGVIATAAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTG---------TGT---ACGAATGTTAGTTCA---GGTTTA------------------------------------TTCTGGAGA---CTATTAGTAGCATCACTTGTTATGCTTGTTGGTGGTTTCATAGGAGAA---------ACT------------------GGC------GGC------------------------------------------------------------------------------------------------------AATGCG------------------ATGGTATGC---GGTGTTATAGCTACTGCAGCTTGGTTATATATTATCTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCTGCAGCA---CAA---AGT---GCT---TTC---GGT---ACAATT---AGATTAATTGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWR-LLVASLVMLVGGFIGE---T------G--G----------------------------------NA------MVC-GVIATAAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_KJ929071 [IV-Gamma5-SAR86a] PRGD_OTU073_otuREP_edd8c2b17483089943a658e7691dce07 gb|KJ929071| PRGD_OTU073_otuREP_edd8c2b17483089943a658e7691dce07, putative proteorhodopsin gene, partial cds. PRGD_OTU073_otuREP_edd8c2b17483089943a658e7691dce07, putative proteorhodopsin gene, partial cds. KJ929071 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTGTGTACGAATGTTAGTTCAGGTTTATTCTGGAGACTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATAGGAGAAACTGGTGGCAATGCGATGGTATGCGGTGTTATAGCTACTGCAGCTTGGTTATACATTATCTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCTGCAGCACAAAGTGCTTTCGGTACAATTAGATTAATTGTTACCGTT LITVPLQIIEFYLILKVCTNVSSGLFWRLLVASLVMLVGGFIGETGGNAMVCGVIATAAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTG---------TGT---ACGAATGTTAGTTCA---GGTTTA------------------------------------TTCTGGAGA---CTATTAGTAGCATCACTAGTTATGCTTGTTGGTGGTTTCATAGGAGAA---------ACT------------------GGT------GGC------------------------------------------------------------------------------------------------------AATGCG------------------ATGGTATGC---GGTGTTATAGCTACTGCAGCTTGGTTATACATTATCTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCTGCAGCA---CAA---AGT---GCT---TTC---GGT---ACAATT---AGATTAATTGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWR-LLVASLVMLVGGFIGE---T------G--G----------------------------------NA------MVC-GVIATAAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_KJ929073 [IV-Gamma5-SAR86a] PRGD_OTU073_673444fdf77428ad7ad3bc7018a13dc6 gb|KJ929073| PRGD_OTU073_673444fdf77428ad7ad3bc7018a13dc6, putative proteorhodopsin gene, partial cds. PRGD_OTU073_673444fdf77428ad7ad3bc7018a13dc6, putative proteorhodopsin gene, partial cds. KJ929073 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (73.9992, 19.2097), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACAGTCCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTGTGCACAAATGTAAGCTCTGGAGTTTTCTGGAGACTATTAGTAGCATCACTAGTAATGCTTATCTTTGGTTTCGTTGGTGAAACTGGTGGTAATGCAGCAGTGATGGGTGCTATTGCAACAGCAGCTTGGTTATACATTATCTATGAAGTGTTCTCTGGTGAAGCTGGACAACTTAATGCTTCAAGCGGTAATGCTGCAGCACAAAGCGCATTTAATACAATCAGATGGATCGTAACCGTC LITVPLQIIEFYLILKVCTNVSSGVFWRLLVASLVMLIFGFVGETGGNAAVMGAIATAAWLYIIYEVFSGEAGQLNASSGNAAAQSAFNTIRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTCCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTG---------TGC---ACAAATGTAAGCTCT---GGAGTT------------------------------------TTCTGGAGA---CTATTAGTAGCATCACTAGTAATGCTTATCTTTGGTTTCGTTGGTGAA---------ACT------------------GGT------GGT------------------------------------------------------------------------------------------------------AATGCA------------------GCAGTGATG---GGTGCTATTGCAACAGCAGCTTGGTTATACATTATCTATGAAGTG---------------TTC------TCT---GGTGAAGCTGGACAACTTAATGCTTCA------AGC---GGTAATGCTGCAGCA---CAA---AGC---GCA---TTT---AAT---ACAATC---AGATGGATCGTAACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLILKV---C-TNVSS-GV------------FWR-LLVASLVMLIFGFVGE---T------G--G----------------------------------NA------AVM-GAIATAAWLYIIYEV-----F--S-GEAGQLNAS--S-GNAAA-Q-S-A-F-N-TI-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_KJ929076 [IV-Gamma5-SAR86a] PRGD_OTU073_a21b3697a6aef3c9d5dfa61ed22bef61 gb|KJ929076| PRGD_OTU073_a21b3697a6aef3c9d5dfa61ed22bef61, putative proteorhodopsin gene, partial cds. PRGD_OTU073_a21b3697a6aef3c9d5dfa61ed22bef61, putative proteorhodopsin gene, partial cds. KJ929076 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508) TTAATCACAGTTCCACTTCAAATCATTGAGTTCTACTTAATTCTTAAAGTGTGTACTAATGTTAGCTCAAGCGTATTCTGGAAGCTCTTATTCGCTTCCTTAGTAATGCTTGTTGTTGGTTTCATGGGTGAAACTGGCTATAACGCATTAGTCTGTGGTGTTATTGCAACAATTGCATGGTTATACATTATCTGGGAAGTATTCTCTGGCGAAGCTGGACAATTAAATGCTTCAAGTGGAAATGCTGCTGCACAAAGCGCATTTGGAACAATCAGATTGATTGTTACTTTT LITVPLQIIEFYLILKVCTNVSSSVFWKLLFASLVMLVVGFMGETGYNALVCGVIATIAWLYIIWEVFSGEAGQLNASSGNAAAQSAFGTIRLIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTTCCACTTCAAATCATTGAGTTCTACTTAATTCTTAAAGTG---------TGT---ACTAATGTTAGCTCA---AGCGTA------------------------------------TTCTGGAAG---CTCTTATTCGCTTCCTTAGTAATGCTTGTTGTTGGTTTCATGGGTGAA---------ACT------------------GGC------TAT------------------------------------------------------------------------------------------------------AACGCA------------------TTAGTCTGT---GGTGTTATTGCAACAATTGCATGGTTATACATTATCTGGGAAGTA---------------TTC------TCT---GGCGAAGCTGGACAATTAAATGCTTCA------AGT---GGAAATGCTGCTGCA---CAA---AGC---GCA---TTT---GGA---ACAATC---AGATTGATTGTTACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLILKV---C-TNVSS-SV------------FWK-LLFASLVMLVVGFMGE---T------G--Y----------------------------------NA------LVC-GVIATIAWLYIIWEV-----F--S-GEAGQLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTF-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_KJ929079 [IV-Gamma5-SAR86a] PRGD_OTU073_ddf89f30667671943ddf94918122a30f gb|KJ929079| PRGD_OTU073_ddf89f30667671943ddf94918122a30f, putative proteorhodopsin gene, partial cds. PRGD_OTU073_ddf89f30667671943ddf94918122a30f, putative proteorhodopsin gene, partial cds. KJ929079 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) TTAATCACAGTTCCGCTTCAAATTATTGAGTTCTACTTAATTCTTAAAGTGTGTACTAATGTTAGTTCAAGCGTATTCTGGAAGCTCTTAGGTGCTTCTTTAGTAATGCTTGTTGTTGGTTTCATGGGTGAAACTGGCTCTAACGCATTAGTCTGTGGTGTTATTGCAACAATTGCATGGTTATACATTATCTACGAAGTATTCTCTGGCGAAGCTGGACAATTAAATGCTTCAAGTGGAAATGCTGCTGCACAAAGCGCATTTGGAACAATCAGATTGATTGTTACTTTT LITVPLQIIEFYLILKVCTNVSSSVFWKLLGASLVMLVVGFMGETGSNALVCGVIATIAWLYIIYEVFSGEAGQLNASSGNAAAQSAFGTIRLIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTTCCGCTTCAAATTATTGAGTTCTACTTAATTCTTAAAGTG---------TGT---ACTAATGTTAGTTCA---AGCGTA------------------------------------TTCTGGAAG---CTCTTAGGTGCTTCTTTAGTAATGCTTGTTGTTGGTTTCATGGGTGAA---------ACT------------------GGC------TCT------------------------------------------------------------------------------------------------------AACGCA------------------TTAGTCTGT---GGTGTTATTGCAACAATTGCATGGTTATACATTATCTACGAAGTA---------------TTC------TCT---GGCGAAGCTGGACAATTAAATGCTTCA------AGT---GGAAATGCTGCTGCA---CAA---AGC---GCA---TTT---GGA---ACAATC---AGATTGATTGTTACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLILKV---C-TNVSS-SV------------FWK-LLGASLVMLVVGFMGE---T------G--S----------------------------------NA------LVC-GVIATIAWLYIIYEV-----F--S-GEAGQLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTF-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_KJ929072 [IV-Gamma5-SAR86a] PRGD_OTU073_1113db8ed433bd0f8f7dd2a8c1ec7c55 gb|KJ929072| PRGD_OTU073_1113db8ed433bd0f8f7dd2a8c1ec7c55, putative proteorhodopsin gene, partial cds. PRGD_OTU073_1113db8ed433bd0f8f7dd2a8c1ec7c55, putative proteorhodopsin gene, partial cds. KJ929072 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATCACAGTTCCACTTCAAATTATTGAGTTCTACTTAATTCTTAAAGTGTGTACTAATGTTAGCTCAAGCGTATTCTGGAAGCTCTTAGGCGCTTCTTTAGTAATGCTTGTTGTTGGTTTCATGGGTGAAACTGGCTCTAACGCATTAGTCTGTGGTGTTATTGCAACAATTGCATGGTTATACATTATCTACGAAGTATTCTCTGGCGAAGCTGGACAATTAAATGCTTCAAGTGGAAATGCTGCTGCACAAAGCGCATTTGGAACAATCAGACTGATTGTTACTTTT LITVPLQIIEFYLILKVCTNVSSSVFWKLLGASLVMLVVGFMGETGSNALVCGVIATIAWLYIIYEVFSGEAGQLNASSGNAAAQSAFGTIRLIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTTCCACTTCAAATTATTGAGTTCTACTTAATTCTTAAAGTG---------TGT---ACTAATGTTAGCTCA---AGCGTA------------------------------------TTCTGGAAG---CTCTTAGGCGCTTCTTTAGTAATGCTTGTTGTTGGTTTCATGGGTGAA---------ACT------------------GGC------TCT------------------------------------------------------------------------------------------------------AACGCA------------------TTAGTCTGT---GGTGTTATTGCAACAATTGCATGGTTATACATTATCTACGAAGTA---------------TTC------TCT---GGCGAAGCTGGACAATTAAATGCTTCA------AGT---GGAAATGCTGCTGCA---CAA---AGC---GCA---TTT---GGA---ACAATC---AGACTGATTGTTACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLILKV---C-TNVSS-SV------------FWK-LLGASLVMLVVGFMGE---T------G--S----------------------------------NA------LVC-GVIATIAWLYIIYEV-----F--S-GEAGQLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTF-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_KJ929078 [IV-Gamma5-SAR86a] PRGD_OTU073_c3803ae2aa0871ec6dfd123135fde8a8 gb|KJ929078| PRGD_OTU073_c3803ae2aa0871ec6dfd123135fde8a8, putative proteorhodopsin gene, partial cds. PRGD_OTU073_c3803ae2aa0871ec6dfd123135fde8a8, putative proteorhodopsin gene, partial cds. KJ929078 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937), Arctic Ocean-Atlantic side (73.9992, 19.2097) TTAATCACAGTACCACTTCAAATTATTGAGTTCTACTTAATTCTTAAAGTATGTACTAACGTTAGCTCAAGCGTTTTCTGGAAGCTTCTAGGAGCTTCACTGGTTATGCTTGTTGTTGGTTTCATGGGTGAAACTGGCTCTAACGCACTAGTTTGTGGAATCGTAGCAACCGCTGCATGGTTATACATTATCTATGAAGTATTCTCTGGCGAAGCTGGACAATTAAATGCTTCTAGTGGTAATGCTGCTGCACAAAGCGCCTTTGGAACAATCAGATTGATTGTTACTTTT LITVPLQIIEFYLILKVCTNVSSSVFWKLLGASLVMLVVGFMGETGSNALVCGIVATAAWLYIIYEVFSGEAGQLNASSGNAAAQSAFGTIRLIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTACCACTTCAAATTATTGAGTTCTACTTAATTCTTAAAGTA---------TGT---ACTAACGTTAGCTCA---AGCGTT------------------------------------TTCTGGAAG---CTTCTAGGAGCTTCACTGGTTATGCTTGTTGTTGGTTTCATGGGTGAA---------ACT------------------GGC------TCT------------------------------------------------------------------------------------------------------AACGCA------------------CTAGTTTGT---GGAATCGTAGCAACCGCTGCATGGTTATACATTATCTATGAAGTA---------------TTC------TCT---GGCGAAGCTGGACAATTAAATGCTTCT------AGT---GGTAATGCTGCTGCA---CAA---AGC---GCC---TTT---GGA---ACAATC---AGATTGATTGTTACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLILKV---C-TNVSS-SV------------FWK-LLGASLVMLVVGFMGE---T------G--S----------------------------------NA------LVC-GIVATAAWLYIIYEV-----F--S-GEAGQLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTF-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_KJ929080 [IV-Gamma5-SAR86a] PRGD_OTU073_e0e92835198cf79fc176a85a7b95f2de gb|KJ929080| PRGD_OTU073_e0e92835198cf79fc176a85a7b95f2de, putative proteorhodopsin gene, partial cds. PRGD_OTU073_e0e92835198cf79fc176a85a7b95f2de, putative proteorhodopsin gene, partial cds. KJ929080 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-14.48, 113.45) TTAATCACAGTACCACTTCAAATTATTGAGTTCTACTTAATTCTTAAAGTATGTACTAACGTTAGCTCAAGCGTTTTCTGGAAGCTTCTAGGAGCTTCACTAGTTATGCTTGTTGTTGGTTTCATGGGTGAAACTGGCTCTAACGCACTAGTTTGTGGAATCGTAGCAACCGCTGCATGGTTATACATTATCTATGAAGTATTCTCTGGCGAAGCTGGACAATTAAATGCTTCAAGTGGTAATGCTGCTGCACAAAGCGCTTTTGGAACAATCAGATTGATTGTTACTTTT LITVPLQIIEFYLILKVCTNVSSSVFWKLLGASLVMLVVGFMGETGSNALVCGIVATAAWLYIIYEVFSGEAGQLNASSGNAAAQSAFGTIRLIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTACCACTTCAAATTATTGAGTTCTACTTAATTCTTAAAGTA---------TGT---ACTAACGTTAGCTCA---AGCGTT------------------------------------TTCTGGAAG---CTTCTAGGAGCTTCACTAGTTATGCTTGTTGTTGGTTTCATGGGTGAA---------ACT------------------GGC------TCT------------------------------------------------------------------------------------------------------AACGCA------------------CTAGTTTGT---GGAATCGTAGCAACCGCTGCATGGTTATACATTATCTATGAAGTA---------------TTC------TCT---GGCGAAGCTGGACAATTAAATGCTTCA------AGT---GGTAATGCTGCTGCA---CAA---AGC---GCT---TTT---GGA---ACAATC---AGATTGATTGTTACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLILKV---C-TNVSS-SV------------FWK-LLGASLVMLVVGFMGE---T------G--S----------------------------------NA------LVC-GIVATAAWLYIIYEV-----F--S-GEAGQLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTF-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_KJ929075 [IV-Gamma5-SAR86a] PRGD_OTU073_8db3e29ad130556d7d31ef18bed137bb gb|KJ929075| PRGD_OTU073_8db3e29ad130556d7d31ef18bed137bb, putative proteorhodopsin gene, partial cds. PRGD_OTU073_8db3e29ad130556d7d31ef18bed137bb, putative proteorhodopsin gene, partial cds. KJ929075 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) TTAATCACAGTACCACTTCAAATTATTGAGTTCTACTTAATTCTTAAAGTTTGTACTAACGTGGCATCAAGCGTATTTTGGAGACTTTTAGGAGCTTCATTAGTTATGCTTGTTGTTGGTTTCATGGGTGAAACTGGTTCAAATGCAATGGTATGCGGAATAGTGGCAACACTTGCATGGTTATATATCATATATGAAGTATTCTCTGGCGAAGCTGGAAAACTAAATGCTTCAAGTGGTAACGCTGCAGCACAAAGCGCATTTGGAACAATCAGATTGATTGTTACTTTT LITVPLQIIEFYLILKVCTNVASSVFWRLLGASLVMLVVGFMGETGSNAMVCGIVATLAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTACCACTTCAAATTATTGAGTTCTACTTAATTCTTAAAGTT---------TGT---ACTAACGTGGCATCA---AGCGTA------------------------------------TTTTGGAGA---CTTTTAGGAGCTTCATTAGTTATGCTTGTTGTTGGTTTCATGGGTGAA---------ACT------------------GGT------TCA------------------------------------------------------------------------------------------------------AATGCA------------------ATGGTATGC---GGAATAGTGGCAACACTTGCATGGTTATATATCATATATGAAGTA---------------TTC------TCT---GGCGAAGCTGGAAAACTAAATGCTTCA------AGT---GGTAACGCTGCAGCA---CAA---AGC---GCA---TTT---GGA---ACAATC---AGATTGATTGTTACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLILKV---C-TNVAS-SV------------FWR-LLGASLVMLVVGFMGE---T------G--S----------------------------------NA------MVC-GIVATLAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTF-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_KJ929081 [IV-Gamma5-SAR86a] PRGD_OTU073_f42b285cfb2f63cb9f8ae9e49211bcb5 gb|KJ929081| PRGD_OTU073_f42b285cfb2f63cb9f8ae9e49211bcb5, putative proteorhodopsin gene, partial cds. PRGD_OTU073_f42b285cfb2f63cb9f8ae9e49211bcb5, putative proteorhodopsin gene, partial cds. KJ929081 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATCACAGTTCCACTTCAAATTATTGAGTTCTACTTAATTCTTAAAGTGTGTACTAACGTTAGCTCAAGCGTATTTTATAAGCTTTTAGGAGCTTCATTAGTTATGCTTGTAGTTGGTTTCATGGGTGAAACTGGTTCAAACGCAATGATTTGCGGAATAGTAGCAACACTTGCATGGTTATACATTATCTATGAAGTATTTTCTGGCGAAGCTGGAAAATTAAATGCTTCAAGTGGTAATGCTGCAGCACAAAGCGCATTTGGAACAATCAGATTGATTGTTACTTTT LITVPLQIIEFYLILKVCTNVSSSVFYKLLGASLVMLVVGFMGETGSNAMICGIVATLAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTTCCACTTCAAATTATTGAGTTCTACTTAATTCTTAAAGTG---------TGT---ACTAACGTTAGCTCA---AGCGTA------------------------------------TTTTATAAG---CTTTTAGGAGCTTCATTAGTTATGCTTGTAGTTGGTTTCATGGGTGAA---------ACT------------------GGT------TCA------------------------------------------------------------------------------------------------------AACGCA------------------ATGATTTGC---GGAATAGTAGCAACACTTGCATGGTTATACATTATCTATGAAGTA---------------TTT------TCT---GGCGAAGCTGGAAAATTAAATGCTTCA------AGT---GGTAATGCTGCAGCA---CAA---AGC---GCA---TTT---GGA---ACAATC---AGATTGATTGTTACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLILKV---C-TNVSS-SV------------FYK-LLGASLVMLVVGFMGE---T------G--S----------------------------------NA------MIC-GIVATLAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTF-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_KJ929672 [IV-Gamma5-SAR86a] PRGD_OTU189_72518c6f7250035a5b492fdd165591cc gb|KJ929672| PRGD_OTU189_72518c6f7250035a5b492fdd165591cc, putative proteorhodopsin gene, partial cds. PRGD_OTU189_72518c6f7250035a5b492fdd165591cc, putative proteorhodopsin gene, partial cds. KJ929672 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) TTAATTACTGTACCGCTTCAAATTATTGAGTTCTTCTTAATACTTAAAGTTTGTACTAATGTTAAATCAAGCGTGTTCTGGAAACTATTAATAGCATCATTAGTAATGCTTGTTGGTGGTTACATGGGTGAGATGGGAATGGCAGATGCCATGATTTGTGGTGTTGTTGCTATGCTTGCATGGTTATACATCATTTATGAAGTCTTTGCAGGTGAAGCTGGTAAGCTAAATGCTTCTAGCGGTAATGCTGCAGCTCAAAGCGCATTTGGAACTATCAGACTGATAGTGACTGTG LITVPLQIIEFFLILKVCTNVKSSVFWKLLIASLVMLVGGYMGEMGMADAMICGVVAMLAWLYIIYEVFAGEAGKLNASSGNAAAQSAFGTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCGCTTCAAATTATTGAGTTCTTCTTAATACTTAAAGTT---------TGT---ACTAATGTTAAATCA---AGCGTG------------------------------------TTCTGGAAA---CTATTAATAGCATCATTAGTAATGCTTGTTGGTGGTTACATGGGTGAG---------ATG------------------GGA------ATG---------------------------------GCA------------------------------------------------------------------GATGCC------------------ATGATTTGT---GGTGTTGTTGCTATGCTTGCATGGTTATACATCATTTATGAAGTC---------------TTT------GCA---GGTGAAGCTGGTAAGCTAAATGCTTCT------AGC---GGTAATGCTGCAGCT---CAA---AGC---GCA---TTT---GGA---ACTATC---AGACTGATAGTGACTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFFLILKV---C-TNVKS-SV------------FWK-LLIASLVMLVGGYMGE---M------G--M-----------A----------------------DA------MIC-GVVAMLAWLYIIYEV-----F--A-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_KJ929671 [IV-Gamma5-SAR86a] PRGD_OTU189_otuREP_98f4dd86d7b6dd5cab22100a43565c87 gb|KJ929671| PRGD_OTU189_otuREP_98f4dd86d7b6dd5cab22100a43565c87, putative proteorhodopsin gene, partial cds. PRGD_OTU189_otuREP_98f4dd86d7b6dd5cab22100a43565c87, putative proteorhodopsin gene, partial cds. KJ929671 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACTGTACCGCTTCAAATTATTGAGTTCTTCTTAATACTTAAAGTTTGTACTAATGTTAAATCAAGCGTGTTCTGGAAACTGTTAATAGCATCATTAGTTATGCTTATTGGTGGTTACATGGGTGAGATGAAAATGGCAGATGCTATGATTTGTGGTGTTGTTGCTATGCTTGCATGGTTATACATCATTTATGAAGTCTTTGCAGGTGAAGCTGGTAAGCTAAATGCTTCTAGCGGTAATGCTGCAGCTCAAAGCGCATTTGGCACTATCAGACTGATAGTGACTGTG LITVPLQIIEFFLILKVCTNVKSSVFWKLLIASLVMLIGGYMGEMKMADAMICGVVAMLAWLYIIYEVFAGEAGKLNASSGNAAAQSAFGTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCGCTTCAAATTATTGAGTTCTTCTTAATACTTAAAGTT---------TGT---ACTAATGTTAAATCA---AGCGTG------------------------------------TTCTGGAAA---CTGTTAATAGCATCATTAGTTATGCTTATTGGTGGTTACATGGGTGAG---------ATG------------------AAA------ATG---------------------------------GCA------------------------------------------------------------------GATGCT------------------ATGATTTGT---GGTGTTGTTGCTATGCTTGCATGGTTATACATCATTTATGAAGTC---------------TTT------GCA---GGTGAAGCTGGTAAGCTAAATGCTTCT------AGC---GGTAATGCTGCAGCT---CAA---AGC---GCA---TTT---GGC---ACTATC---AGACTGATAGTGACTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFFLILKV---C-TNVKS-SV------------FWK-LLIASLVMLIGGYMGE---M------K--M-----------A----------------------DA------MIC-GVVAMLAWLYIIYEV-----F--A-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_KJ929673 [IV-Gamma5-SAR86a] PRGD_OTU189_ec4e5b848a8a4e89b310bf2cd0676f37 gb|KJ929673| PRGD_OTU189_ec4e5b848a8a4e89b310bf2cd0676f37, putative proteorhodopsin gene, partial cds. PRGD_OTU189_ec4e5b848a8a4e89b310bf2cd0676f37, putative proteorhodopsin gene, partial cds. KJ929673 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAATTACTGTACCGCTTCAAATTATTGAGTTCTACTTAATTCTTAAAGTTTGTACTAATGTTAAATCAAGCATGTTCTGGAAACTATTAATAGCATCATTAGTAATGCTTGTTGGTGGTTACATGGGTGAGATGAAAATGGCAAATGCTATGGTTTGTGGTGTTGTTGCTATGCTTGCATGGTTATACATCATTTATGAAGTCTTTGCTGGTGAAGCTGGAAAGCTTAATGCTTCTAGCGGTAATGCTGCAGCTCAAAGCGCATTTGGTACTATCAGATTGATAGTGACT LITVPLQIIEFYLILKVCTNVKSSMFWKLLIASLVMLVGGYMGEMKMANAMVCGVVAMLAWLYIIYEVFAGEAGKLNASSGNAAAQSAFGTIRLIVT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCGCTTCAAATTATTGAGTTCTACTTAATTCTTAAAGTT---------TGT---ACTAATGTTAAATCA---AGCATG------------------------------------TTCTGGAAA---CTATTAATAGCATCATTAGTAATGCTTGTTGGTGGTTACATGGGTGAG---------ATG------------------AAA------ATG---------------------------------GCA------------------------------------------------------------------AATGCT------------------ATGGTTTGT---GGTGTTGTTGCTATGCTTGCATGGTTATACATCATTTATGAAGTC---------------TTT------GCT---GGTGAAGCTGGAAAGCTTAATGCTTCT------AGC---GGTAATGCTGCAGCT---CAA---AGC---GCA---TTT---GGT---ACTATC---AGATTGATAGTGACT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLILKV---C-TNVKS-SM------------FWK-LLIASLVMLVGGYMGE---M------K--M-----------A----------------------NA------MVC-GVVAMLAWLYIIYEV-----F--A-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVT--------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_KJ929074 [IV-Gamma5-SAR86a] PRGD_OTU073_85add24ef302f70e20240eb9af199527 gb|KJ929074| PRGD_OTU073_85add24ef302f70e20240eb9af199527, putative proteorhodopsin gene, partial cds. PRGD_OTU073_85add24ef302f70e20240eb9af199527, putative proteorhodopsin gene, partial cds. KJ929074 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACTGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTGTGTACAAATGTTAGTTCAGGACTTTTCTGGAAACTACTTGGAGCATCTTTAGTTATGCTTATTGGTGGATTCTTGGGAGAGACAGGAAGTAATGCTATGGTTTGTGGTGTTATCGCAACACTTGCTTGGTTGTATATTATCTATGAAGTATTTGCTGGTGAAGCTGGCAAACTTAATGCTTCAAGTGGTAATGCGGCAGCTCAAAGCGCCTTCGGCACAATCAGATTAATTGTTACTGTG LITVPLQIIEFYLILKVCTNVSSGLFWKLLGASLVMLIGGFLGETGSNAMVCGVIATLAWLYIIYEVFAGEAGKLNASSGNAAAQSAFGTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTTCCACTTCAAATTATTGAGTTCTACTTAATACTTAAAGTG---------TGT---ACAAATGTTAGTTCA---GGACTT------------------------------------TTCTGGAAA---CTACTTGGAGCATCTTTAGTTATGCTTATTGGTGGATTCTTGGGAGAG---------ACA------------------GGA------AGT------------------------------------------------------------------------------------------------------AATGCT------------------ATGGTTTGT---GGTGTTATCGCAACACTTGCTTGGTTGTATATTATCTATGAAGTA---------------TTT------GCT---GGTGAAGCTGGCAAACTTAATGCTTCA------AGT---GGTAATGCGGCAGCT---CAA---AGC---GCC---TTC---GGC---ACAATC---AGATTAATTGTTACTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWK-LLGASLVMLIGGFLGE---T------G--S----------------------------------NA------MVC-GVIATLAWLYIIYEV-----F--A-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_KJ929196 [IV-Gamma5-SAR86a] PRGD_OTU086_7169e84adb9f522551c2860821e25c04 gb|KJ929196| PRGD_OTU086_7169e84adb9f522551c2860821e25c04, putative proteorhodopsin gene, partial cds. PRGD_OTU086_7169e84adb9f522551c2860821e25c04, putative proteorhodopsin gene, partial cds. KJ929196 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATTACAGTGCCGCTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTTTGCACTAACGTAAGCTCTGGTCTTTTCTGGAAACTACTTGGAGCATCTTTAGTAATGCTTATTGCTGGTTTCATGGGAGAAACTGGTTCTGCTCCAGCTAATGCAGCTGGTATCGTTGGAGTAATTGCTTGGTTATATATCATTTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCTGCTGCTCAAAGTGCCTTTGGAACAATTAGATTAATTGTTACTATA LITVPLQIIEFYLILKVCTNVSSGLFWKLLGASLVMLIAGFMGETGSAPANAAGIVGVIAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCGCTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTT---------TGC---ACTAACGTAAGCTCT---GGTCTT------------------------------------TTCTGGAAA---CTACTTGGAGCATCTTTAGTAATGCTTATTGCTGGTTTCATGGGAGAA---------ACT------------------GGT------TCT---------------------------------GCT------------------------------------------------------------------CCAGCT------------------AATGCAGCT---GGTATCGTTGGAGTAATTGCTTGGTTATATATCATTTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCTGCTGCT---CAA---AGT---GCC---TTT---GGA---ACAATT---AGATTAATTGTTACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWK-LLGASLVMLIAGFMGE---T------G--S-----------A----------------------PA------NAA-GIVGVIAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_KJ929192 [IV-Gamma5-SAR86a] PRGD_OTU086_otuREP_99a2a4caa5cb732605c48a3024401fc7 gb|KJ929192| PRGD_OTU086_otuREP_99a2a4caa5cb732605c48a3024401fc7, putative proteorhodopsin gene, partial cds. PRGD_OTU086_otuREP_99a2a4caa5cb732605c48a3024401fc7, putative proteorhodopsin gene, partial cds. KJ929192 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683) CTAATTACTGTGCCACTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTATGCACAAACGTAAGCTCTGGTCTATTCTGGAAACTACTTGGAGCATCATTAGTAATGCTTATCGCTGGTTTCATGGGAGAAACTGGATCTGCTCCAGCAAATGCTGCTGGTATCGTTGGAGTAATCGCTTGGTTATATATCATTTATGAAGTATTTTCTGGTGAAGCTGGAAAACTTAATGCTTCAAGTGGTAATGCCGCTGCTCAAAGTGCCTTCGGAACAATTAGATTAATTGTTACTATA LITVPLQIIEFYLILKVCTNVSSGLFWKLLGASLVMLIAGFMGETGSAPANAAGIVGVIAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTGCCACTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTA---------TGC---ACAAACGTAAGCTCT---GGTCTA------------------------------------TTCTGGAAA---CTACTTGGAGCATCATTAGTAATGCTTATCGCTGGTTTCATGGGAGAA---------ACT------------------GGA------TCT---------------------------------GCT------------------------------------------------------------------CCAGCA------------------AATGCTGCT---GGTATCGTTGGAGTAATCGCTTGGTTATATATCATTTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCTTCA------AGT---GGTAATGCCGCTGCT---CAA---AGT---GCC---TTC---GGA---ACAATT---AGATTAATTGTTACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWK-LLGASLVMLIAGFMGE---T------G--S-----------A----------------------PA------NAA-GIVGVIAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_KJ929193 [IV-Gamma5-SAR86a] PRGD_OTU086_2421e95cc21688e4f89237e26e100f12 gb|KJ929193| PRGD_OTU086_2421e95cc21688e4f89237e26e100f12, putative proteorhodopsin gene, partial cds. PRGD_OTU086_2421e95cc21688e4f89237e26e100f12, putative proteorhodopsin gene, partial cds. KJ929193 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-33.28, 45.35) CTAATTACTGTGCCACTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTATGCACTAATGTAAGTTCTGGCCTATTCTGGAAACTACTTGGAGCATCATTAGTAATGCTTATCGCTGGTTTCATGGGAGAAACTGGAGCTGCTCCAGCAAATGCTGCTGGTATCGTAGGAGTAATTGCTTGGTTATATATCATCTATGAAGTATTTTCTGGTGAAGCTGGAAAACTAAATGCTTCAAGTGGTAATGCTGCTGCTCAAAGTGCTTTCGGTACAATTAGATTAATTGTTACTGTT LITVPLQIIEFYLILKVCTNVSSGLFWKLLGASLVMLIAGFMGETGAAPANAAGIVGVIAWLYIIYEVFSGEAGKLNASSGNAAAQSAFGTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTGCCACTTCAAATTATCGAGTTCTACTTGATTCTTAAAGTA---------TGC---ACTAATGTAAGTTCT---GGCCTA------------------------------------TTCTGGAAA---CTACTTGGAGCATCATTAGTAATGCTTATCGCTGGTTTCATGGGAGAA---------ACT------------------GGA------GCT---------------------------------GCT------------------------------------------------------------------CCAGCA------------------AATGCTGCT---GGTATCGTAGGAGTAATTGCTTGGTTATATATCATCTATGAAGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTAAATGCTTCA------AGT---GGTAATGCTGCTGCT---CAA---AGT---GCT---TTC---GGT---ACAATT---AGATTAATTGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWK-LLGASLVMLIAGFMGE---T------G--A-----------A----------------------PA------NAA-GIVGVIAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-G-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_KJ929888 [IV-Gamma5-SAR86a] PRGD_OTU339_otuREP_6274b37ec42138aef31c0f9944aee0c0 gb|KJ929888| PRGD_OTU339_otuREP_6274b37ec42138aef31c0f9944aee0c0, putative proteorhodopsin gene, partial cds. PRGD_OTU339_otuREP_6274b37ec42138aef31c0f9944aee0c0, putative proteorhodopsin gene, partial cds. KJ929888 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTACCACTTCAAATAATTGAGTTTTACTTAATTCTTAGAGTTTGTACTAATGTTGGTTCTGGTCTTTTCTGGAAATTACTTGGAGCATCATTAGTAATGCTTGTATGTGGTTTCATGGGAGAAACTGGAGTTGCAAGTGCAAATGTAATGGGTATTGTTGGTGTATTAGCTTGGTTGTACATTGTTTATGAGATATTCTCAGGTGAAGCTGGACAGCTTAATGCTTCTAGTGGCAATGCAGCCGCACAACAAGCTTTCAGTACAATTAGATTAATTGTTACTGTT LITVPLQIIEFYLILRVCTNVGSGLFWKLLGASLVMLVCGFMGETGVASANVMGIVGVLAWLYIVYEIFSGEAGQLNASSGNAAAQQAFSTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTACCACTTCAAATAATTGAGTTTTACTTAATTCTTAGAGTT---------TGT---ACTAATGTTGGTTCT---GGTCTT------------------------------------TTCTGGAAA---TTACTTGGAGCATCATTAGTAATGCTTGTATGTGGTTTCATGGGAGAA---------ACT------------------GGA------GTT---------------------------------GCA------------------------------------------------------------------AGTGCA------------------AATGTAATG---GGTATTGTTGGTGTATTAGCTTGGTTGTACATTGTTTATGAGATA---------------TTC------TCA---GGTGAAGCTGGACAGCTTAATGCTTCT------AGT---GGCAATGCAGCCGCA---CAA---CAA---GCT---TTC---AGT---ACAATT---AGATTAATTGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLILRV---C-TNVGS-GL------------FWK-LLGASLVMLVCGFMGE---T------G--V-----------A----------------------SA------NVM-GIVGVLAWLYIVYEI-----F--S-GEAGQLNAS--S-GNAAA-Q-Q-A-F-S-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_KJ929839 [IV-Gamma5-SAR86a] PRGD_OTU290_otuREP_5a2c975754811e26089d2d2668e4087e gb|KJ929839| PRGD_OTU290_otuREP_5a2c975754811e26089d2d2668e4087e, putative proteorhodopsin gene, partial cds. PRGD_OTU290_otuREP_5a2c975754811e26089d2d2668e4087e, putative proteorhodopsin gene, partial cds. KJ929839 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508) TTAATTACTGTGCCACTTCAAATAATTGAGTTTTACTTGATTCTTAAAGTATGTACAAATGTAAGTTCTGGTCTATTCTGGAAACTTTTAGGAGCATCTTTAGTTATGCTTATCTTTGGTTTCATGGGAGAGACTGGTTCAATGAATGCAAATATTGCAGGTATTATTGCTCTATTAGCATGGTTTTACATTATCTATGAGATTTTCATGGGTGAAGCTGGAAAACTAAATGCTTCTAGTGGTAATGCTGCTGCTCAAAGTGCCTTTAGTACGATTAGATTAATTGTTACTGTC LITVPLQIIEFYLILKVCTNVSSGLFWKLLGASLVMLIFGFMGETGSMNANIAGIIALLAWFYIIYEIFMGEAGKLNASSGNAAAQSAFSTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCACTTCAAATAATTGAGTTTTACTTGATTCTTAAAGTA---------TGT---ACAAATGTAAGTTCT---GGTCTA------------------------------------TTCTGGAAA---CTTTTAGGAGCATCTTTAGTTATGCTTATCTTTGGTTTCATGGGAGAG---------ACT------------------GGT------TCA---------------------------------ATG------------------------------------------------------------------AATGCA------------------AATATTGCA---GGTATTATTGCTCTATTAGCATGGTTTTACATTATCTATGAGATT---------------TTC------ATG---GGTGAAGCTGGAAAACTAAATGCTTCT------AGT---GGTAATGCTGCTGCT---CAA---AGT---GCC---TTT---AGT---ACGATT---AGATTAATTGTTACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLILKV---C-TNVSS-GL------------FWK-LLGASLVMLIFGFMGE---T------G--S-----------M----------------------NA------NIA-GIIALLAWFYIIYEI-----F--M-GEAGKLNAS--S-GNAAA-Q-S-A-F-S-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_KJ929490 [IV-Gamma5-SAR86a] PRGD_OTU136_otuREP_19bbc85333ee58bd48d1d5900ae5745c gb|KJ929490| PRGD_OTU136_otuREP_19bbc85333ee58bd48d1d5900ae5745c, putative proteorhodopsin gene, partial cds. PRGD_OTU136_otuREP_19bbc85333ee58bd48d1d5900ae5745c, putative proteorhodopsin gene, partial cds. KJ929490 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419) CTAATTACCGTTCCACTTCAAATTATTGAGTTCTATTTGATCCTAAAGGTCTGTACTAATGTTGGTTCAGGCGTTTTCTGGAGACTATTAGGAGCATCACTTGTTATGCTAATAGCTGGATTTATGGGTGAAACAGGTTCTAATGCAATGATTTGTTTTGTAATTGGAATGGCGGCTTGGTTGTATATAATTTATGAGGTCTTCTCTGGAGAAGCAGGTAAGTTAAATGCATCAAGCGGTAACGTAGCTGCACAACAGGCATTTAGCACAATTCGTTTGATTGTGACTGTC LITVPLQIIEFYLILKVCTNVGSGVFWRLLGASLVMLIAGFMGETGSNAMICFVIGMAAWLYIIYEVFSGEAGKLNASSGNVAAQQAFSTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACCGTTCCACTTCAAATTATTGAGTTCTATTTGATCCTAAAGGTC---------TGT---ACTAATGTTGGTTCA---GGCGTT------------------------------------TTCTGGAGA---CTATTAGGAGCATCACTTGTTATGCTAATAGCTGGATTTATGGGTGAA---------ACA------------------GGT------TCT------------------------------------------------------------------------------------------------------AATGCA------------------ATGATTTGT---TTTGTAATTGGAATGGCGGCTTGGTTGTATATAATTTATGAGGTC---------------TTC------TCT---GGAGAAGCAGGTAAGTTAAATGCATCA------AGC---GGTAACGTAGCTGCA---CAA---CAG---GCA---TTT---AGC---ACAATT---CGTTTGATTGTGACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLILKV---C-TNVGS-GV------------FWR-LLGASLVMLIAGFMGE---T------G--S----------------------------------NA------MIC-FVIGMAAWLYIIYEV-----F--S-GEAGKLNAS--S-GNVAA-Q-Q-A-F-S-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_KJ929493 [IV-Gamma5-SAR86a] PRGD_OTU136_d7d939029ddf430b09c8b784b808f6bc gb|KJ929493| PRGD_OTU136_d7d939029ddf430b09c8b784b808f6bc, putative proteorhodopsin gene, partial cds. PRGD_OTU136_d7d939029ddf430b09c8b784b808f6bc, putative proteorhodopsin gene, partial cds. KJ929493 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATTACCGTTCCACTTCAAATTATTGAGTTCTATTTGATCCTAAAGGTCTGTACCAATGTTGGCTCAGGCGTTTTCTGGAGACTATTAGGCGCATCACTTGTTATGCTAATAGCTGGATTTATGGGTGAAACAGGTTCTAATGCAATGATTTGTTTTGTAATTGGAATGGCGGCTTGGTTGTATATAATTTATGAGGTCTTCTCTGGAGAAGCAGGTAAGTTAAATGCATCAAGCGGTAACGTAGCTGCACAACAAGCATTTAGCACAATTCGTTTGATTGTGACTGTC LITVPLQIIEFYLILKVCTNVGSGVFWRLLGASLVMLIAGFMGETGSNAMICFVIGMAAWLYIIYEVFSGEAGKLNASSGNVAAQQAFSTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACCGTTCCACTTCAAATTATTGAGTTCTATTTGATCCTAAAGGTC---------TGT---ACCAATGTTGGCTCA---GGCGTT------------------------------------TTCTGGAGA---CTATTAGGCGCATCACTTGTTATGCTAATAGCTGGATTTATGGGTGAA---------ACA------------------GGT------TCT------------------------------------------------------------------------------------------------------AATGCA------------------ATGATTTGT---TTTGTAATTGGAATGGCGGCTTGGTTGTATATAATTTATGAGGTC---------------TTC------TCT---GGAGAAGCAGGTAAGTTAAATGCATCA------AGC---GGTAACGTAGCTGCA---CAA---CAA---GCA---TTT---AGC---ACAATT---CGTTTGATTGTGACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLILKV---C-TNVGS-GV------------FWR-LLGASLVMLIAGFMGE---T------G--S----------------------------------NA------MIC-FVIGMAAWLYIIYEV-----F--S-GEAGKLNAS--S-GNVAA-Q-Q-A-F-S-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_KJ929492 [IV-Gamma5-SAR86a] PRGD_OTU136_cc69cc74126a51260738468dc4888c5c gb|KJ929492| PRGD_OTU136_cc69cc74126a51260738468dc4888c5c, putative proteorhodopsin gene, partial cds. PRGD_OTU136_cc69cc74126a51260738468dc4888c5c, putative proteorhodopsin gene, partial cds. KJ929492 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175) TTGATTACTGTACCTCTACAAATCATAGAATTTTATTTGATTTTAAGAGTCTGTACCAACGTTTCATCTGGTCTTTTTTGGAGACTTTTAGCCGCATCACTAGTCATGCTTATTGCAGGATTTATGGGTGAAACTGGTTCAAATGCAATGATTTGCTTTGTAATCGGAATGGCTGGTTGGTTGTACATCATCTATGAAGTCTTCACTGGTGAAGCTGGTAAGCTTAATGCATCTAGCGGTAATGCTGCTGCGCAACAAGCTTTTAGTACTATCAGATTAATTGTAACCGTT LITVPLQIIEFYLILRVCTNVSSGLFWRLLAASLVMLIAGFMGETGSNAMICFVIGMAGWLYIIYEVFTGEAGKLNASSGNAAAQQAFSTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTACCTCTACAAATCATAGAATTTTATTTGATTTTAAGAGTC---------TGT---ACCAACGTTTCATCT---GGTCTT------------------------------------TTTTGGAGA---CTTTTAGCCGCATCACTAGTCATGCTTATTGCAGGATTTATGGGTGAA---------ACT------------------GGT------TCA------------------------------------------------------------------------------------------------------AATGCA------------------ATGATTTGC---TTTGTAATCGGAATGGCTGGTTGGTTGTACATCATCTATGAAGTC---------------TTC------ACT---GGTGAAGCTGGTAAGCTTAATGCATCT------AGC---GGTAATGCTGCTGCG---CAA---CAA---GCT---TTT---AGT---ACTATC---AGATTAATTGTAACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLILRV---C-TNVSS-GL------------FWR-LLAASLVMLIAGFMGE---T------G--S----------------------------------NA------MIC-FVIGMAGWLYIIYEV-----F--T-GEAGKLNAS--S-GNAAA-Q-Q-A-F-S-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_KJ929491 [IV-Gamma5-SAR86a] PRGD_OTU136_3b86161f4ac3f1d90fb66e9e24d376a8 gb|KJ929491| PRGD_OTU136_3b86161f4ac3f1d90fb66e9e24d376a8, putative proteorhodopsin gene, partial cds. PRGD_OTU136_3b86161f4ac3f1d90fb66e9e24d376a8, putative proteorhodopsin gene, partial cds. KJ929491 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAATTACAGTTCCGCTTCAAGTAATTGAATTCTATTTAATTCTTAGAGTGTGTACGAATGTTTCTTCAGGTTTATTCTGGAAACTATTAGGTGCTTCTGTAGTTATGCTAGTTGCTGGTTTCATGGGTGAAACAGGCTCTAATGCAATGATTTGCTTTGTTGTAGGAATGGCGGCTTGGTTATACATCATATATGAAGTCTTTACAGGAGAAGCTGGAAAGTTAAATGCTTCTAGCGGCAATGCTGCTGCACAACAAGCATTCAGCACAATCAGACTAATTGTGACCGTT LITVPLQVIEFYLILRVCTNVSSGLFWKLLGASVVMLVAGFMGETGSNAMICFVVGMAAWLYIIYEVFTGEAGKLNASSGNAAAQQAFSTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCGCTTCAAGTAATTGAATTCTATTTAATTCTTAGAGTG---------TGT---ACGAATGTTTCTTCA---GGTTTA------------------------------------TTCTGGAAA---CTATTAGGTGCTTCTGTAGTTATGCTAGTTGCTGGTTTCATGGGTGAA---------ACA------------------GGC------TCT------------------------------------------------------------------------------------------------------AATGCA------------------ATGATTTGC---TTTGTTGTAGGAATGGCGGCTTGGTTATACATCATATATGAAGTC---------------TTT------ACA---GGAGAAGCTGGAAAGTTAAATGCTTCT------AGC---GGCAATGCTGCTGCA---CAA---CAA---GCA---TTC---AGC---ACAATC---AGACTAATTGTGACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVIEFYLILRV---C-TNVSS-GL------------FWK-LLGASVVMLVAGFMGE---T------G--S----------------------------------NA------MIC-FVVGMAAWLYIIYEV-----F--T-GEAGKLNAS--S-GNAAA-Q-Q-A-F-S-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_KJ929195 [IV-Gamma5-SAR86a] PRGD_OTU086_6d425b623de34cd5fe540b1f9aed1128 gb|KJ929195| PRGD_OTU086_6d425b623de34cd5fe540b1f9aed1128, putative proteorhodopsin gene, partial cds. PRGD_OTU086_6d425b623de34cd5fe540b1f9aed1128, putative proteorhodopsin gene, partial cds. KJ929195 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATTACAGTTCCATTACAAATAATCGAATTTTATTTGATCCTAAGAGTTTGTACTAATGTAGGTTCTGGATTGTTCTGGAAACTGCTTGGTGCATCACTTGTAATGCTTATTGCAGGTTTCTTAGGAGAAATTGGATCTGCACCAGCATGGCCAGCATTTATTGTTGGGATGGCAGCTTGGTTGTATATCATATACGAGGTATTTTCAGGTGAAGCTGGAAAACTTAATGCCTCAAGTGGTAATGCAGCCGCTCAAAGCGCTTTCAGCACAATCAGACTAATTGTGACTATT LITVPLQIIEFYLILRVCTNVGSGLFWKLLGASLVMLIAGFLGEIGSAPAWPAFIVGMAAWLYIIYEVFSGEAGKLNASSGNAAAQSAFSTIRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACAGTTCCATTACAAATAATCGAATTTTATTTGATCCTAAGAGTT---------TGT---ACTAATGTAGGTTCT---GGATTG------------------------------------TTCTGGAAA---CTGCTTGGTGCATCACTTGTAATGCTTATTGCAGGTTTCTTAGGAGAA---------ATT------------------GGA------TCT---------------------------------GCA------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTTATTGTTGGGATGGCAGCTTGGTTGTATATCATATACGAGGTA---------------TTT------TCA---GGTGAAGCTGGAAAACTTAATGCCTCA------AGT---GGTAATGCAGCCGCT---CAA---AGC---GCT---TTC---AGC---ACAATC---AGACTAATTGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLILRV---C-TNVGS-GL------------FWK-LLGASLVMLIAGFLGE---I------G--S-----------A----------------------PA------WPA-FIVGMAAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-S-TI-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_KJ929198 [IV-Gamma5-SAR86a] PRGD_OTU086_c1964d27ea145a5c5b8854a3b04c7e92 gb|KJ929198| PRGD_OTU086_c1964d27ea145a5c5b8854a3b04c7e92, putative proteorhodopsin gene, partial cds. PRGD_OTU086_c1964d27ea145a5c5b8854a3b04c7e92, putative proteorhodopsin gene, partial cds. KJ929198 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTAATTACAGTTCCATTACAAATAATTGAATTTTATTTGATCCTTAGAGTTTGTACTAATGTAGGTTCCGGATTGTTCTGGAAACTTCTTGGTGCATCACTTGTAATGCTTATTGCAGGTTTCTTAGGAGAAATTGGATCTGCACCAGCATGGCCAGCATTTATTGTTGGGATGGCAGCTTGGTTGTATATCATATACGAGGTATTTTCAGGTGAAGCTGGAAAACTTAATGCCTCAAGTGGTAATGCAGCCGCTCAAAGTGCTTTCAGCACAATCAGATTAATTGTGACTATT LITVPLQIIEFYLILRVCTNVGSGLFWKLLGASLVMLIAGFLGEIGSAPAWPAFIVGMAAWLYIIYEVFSGEAGKLNASSGNAAAQSAFSTIRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTACAAATAATTGAATTTTATTTGATCCTTAGAGTT---------TGT---ACTAATGTAGGTTCC---GGATTG------------------------------------TTCTGGAAA---CTTCTTGGTGCATCACTTGTAATGCTTATTGCAGGTTTCTTAGGAGAA---------ATT------------------GGA------TCT---------------------------------GCA------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTTATTGTTGGGATGGCAGCTTGGTTGTATATCATATACGAGGTA---------------TTT------TCA---GGTGAAGCTGGAAAACTTAATGCCTCA------AGT---GGTAATGCAGCCGCT---CAA---AGT---GCT---TTC---AGC---ACAATC---AGATTAATTGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLILRV---C-TNVGS-GL------------FWK-LLGASLVMLIAGFLGE---I------G--S-----------A----------------------PA------WPA-FIVGMAAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-S-TI-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_KJ929197 [IV-Gamma5-SAR86a] PRGD_OTU086_775a7a93774816edfc455a92c16912c1 gb|KJ929197| PRGD_OTU086_775a7a93774816edfc455a92c16912c1, putative proteorhodopsin gene, partial cds. PRGD_OTU086_775a7a93774816edfc455a92c16912c1, putative proteorhodopsin gene, partial cds. KJ929197 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Pacific side (69.5142, -133.4185), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTAATTACAGTTCCATTACAAATAATTGAATTTTATTTGATCCTAAGAGTTTGTACTAATGTAGGTTCTGGATTATTCTGGAAACTTCTTGGTGCATCACTTGTAATGCTTATTGCAGGTTTCTTAGGAGAAATTGGATCTGCACCAGCATGGCCAGCATTTATTGTTGGGATGGCGGCTTGGTTGTATATCATATACGAGGTATTTTCAGGTGAAGCTGGAAAACTTAACGCCTCAAGTGGTAATGCAGCCGCTCAAAGCGCTTTCAGCACAATCAGACTAATTGTGACTATT LITVPLQIIEFYLILRVCTNVGSGLFWKLLGASLVMLIAGFLGEIGSAPAWPAFIVGMAAWLYIIYEVFSGEAGKLNASSGNAAAQSAFSTIRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTACAAATAATTGAATTTTATTTGATCCTAAGAGTT---------TGT---ACTAATGTAGGTTCT---GGATTA------------------------------------TTCTGGAAA---CTTCTTGGTGCATCACTTGTAATGCTTATTGCAGGTTTCTTAGGAGAA---------ATT------------------GGA------TCT---------------------------------GCA------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTTATTGTTGGGATGGCGGCTTGGTTGTATATCATATACGAGGTA---------------TTT------TCA---GGTGAAGCTGGAAAACTTAACGCCTCA------AGT---GGTAATGCAGCCGCT---CAA---AGC---GCT---TTC---AGC---ACAATC---AGACTAATTGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLILRV---C-TNVGS-GL------------FWK-LLGASLVMLIAGFLGE---I------G--S-----------A----------------------PA------WPA-FIVGMAAWLYIIYEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-S-TI-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_KJ929194 [IV-Gamma5-SAR86a] PRGD_OTU086_4ccda05f71cb0aa87420e7ae24cb9566 gb|KJ929194| PRGD_OTU086_4ccda05f71cb0aa87420e7ae24cb9566, putative proteorhodopsin gene, partial cds. PRGD_OTU086_4ccda05f71cb0aa87420e7ae24cb9566, putative proteorhodopsin gene, partial cds. KJ929194 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATTACAGTTCCATTACAAATAATTGAATTTTATTTGATTCTAAGAGTTTGTACTAATGTAAGTTCCGGATTGTTCTGGAAACTTCTTGGTGCATCACTTGTAATGCTTATTGCAGGTTTCTTAGGAGAAATTGGATCTGCACCAGCATGGCCAGCATTTATTGTTGGGATGGCAGCTTGGTTGTATATCATATGGGAGGTATTTTCAGGTGAAGCTGGAAAACTTAATGCCTCTAGTGGTAATGCAGCCGCTCAAAGCGCTTTCAGCACAATCAGATTAATTGTAACTGTT LITVPLQIIEFYLILRVCTNVSSGLFWKLLGASLVMLIAGFLGEIGSAPAWPAFIVGMAAWLYIIWEVFSGEAGKLNASSGNAAAQSAFSTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACAGTTCCATTACAAATAATTGAATTTTATTTGATTCTAAGAGTT---------TGT---ACTAATGTAAGTTCC---GGATTG------------------------------------TTCTGGAAA---CTTCTTGGTGCATCACTTGTAATGCTTATTGCAGGTTTCTTAGGAGAA---------ATT------------------GGA------TCT---------------------------------GCA------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTTATTGTTGGGATGGCAGCTTGGTTGTATATCATATGGGAGGTA---------------TTT------TCA---GGTGAAGCTGGAAAACTTAATGCCTCT------AGT---GGTAATGCAGCCGCT---CAA---AGC---GCT---TTC---AGC---ACAATC---AGATTAATTGTAACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLILRV---C-TNVSS-GL------------FWK-LLGASLVMLIAGFLGE---I------G--S-----------A----------------------PA------WPA-FIVGMAAWLYIIWEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-S-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_KJ929199 [IV-Gamma5-SAR86a] PRGD_OTU086_fdd7872af14170183d7cd0d6627bff1a gb|KJ929199| PRGD_OTU086_fdd7872af14170183d7cd0d6627bff1a, putative proteorhodopsin gene, partial cds. PRGD_OTU086_fdd7872af14170183d7cd0d6627bff1a, putative proteorhodopsin gene, partial cds. KJ929199 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) TTGATTACAGTTCCATTACAAATAATTGAATTTTATTTGATTCTAAGAGTTTGTACTAATGTAAGTTCCGGATTGTTCTGGAAACTTCTTGGTGCATCACTTGTAATGCTTATTGCAGGTTTCTTAGGAGAAATTGGATCTGCACCAGCGTGGCCAGCATTTATTGTTGGGATGGCAGCTTGGTTGTATATTATATGGGAGGTATTTTCTGGTGAAGCTGGAAAACTTAATGCCTCTAGTGGTAATGCAGCCGCTCAAAGTGCTTTCAGCACTATCAGGTTAATTGTAACTGTT LITVPLQIIEFYLILRVCTNVSSGLFWKLLGASLVMLIAGFLGEIGSAPAWPAFIVGMAAWLYIIWEVFSGEAGKLNASSGNAAAQSAFSTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACAGTTCCATTACAAATAATTGAATTTTATTTGATTCTAAGAGTT---------TGT---ACTAATGTAAGTTCC---GGATTG------------------------------------TTCTGGAAA---CTTCTTGGTGCATCACTTGTAATGCTTATTGCAGGTTTCTTAGGAGAA---------ATT------------------GGA------TCT---------------------------------GCA------------------------------------------------------------------CCAGCG------------------TGGCCAGCA---TTTATTGTTGGGATGGCAGCTTGGTTGTATATTATATGGGAGGTA---------------TTT------TCT---GGTGAAGCTGGAAAACTTAATGCCTCT------AGT---GGTAATGCAGCCGCT---CAA---AGT---GCT---TTC---AGC---ACTATC---AGGTTAATTGTAACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLILRV---C-TNVSS-GL------------FWK-LLGASLVMLIAGFLGE---I------G--S-----------A----------------------PA------WPA-FIVGMAAWLYIIWEV-----F--S-GEAGKLNAS--S-GNAAA-Q-S-A-F-S-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_KJ929628 [IV-Gamma5-SAR86a] PRGD_OTU174_a1c6f930b0215fa554354a505fb59571 gb|KJ929628| PRGD_OTU174_a1c6f930b0215fa554354a505fb59571, putative proteorhodopsin gene, partial cds. PRGD_OTU174_a1c6f930b0215fa554354a505fb59571, putative proteorhodopsin gene, partial cds. KJ929628 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) TTGATAACTGTTCCACTTCAAATAGTGGAGTTCTACCTCATCCTAGCAGCTGTTACTAGCGTAAGCGCAAGCTTATTCTGGAAACTGCTTGTTGGTTCACTAGTTATGTTAATTGGTGGATATTTGGGTGAAGCTGGATACATGGCTAAAATGCCTGCATTTGCAATAGGTATGCTCGGTTGGGCTTACATTATTTACTTGATCTTCGCTGGCGAAGCTGCCAACGTTAATGCTTCAAGTGGTAATGCTGCTAGCCAATATGCCTTCAAAGCAATCAGAATGATTGTTCTTGTT LITVPLQIVEFYLILAAVTSVSASLFWKLLVGSLVMLIGGYLGEAGYMAKMPAFAIGMLGWAYIIYLIFAGEAANVNASSGNAASQYAFKAIRMIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACTGTTCCACTTCAAATAGTGGAGTTCTACCTCATCCTAGCAGCT---------GTT---ACTAGCGTAAGCGCA---AGCTTA------------------------------------TTCTGGAAA---CTGCTTGTTGGTTCACTAGTTATGTTAATTGGTGGATATTTGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------GCTAAA------------------ATGCCTGCA---TTTGCAATAGGTATGCTCGGTTGGGCTTACATTATTTACTTGATC---------------TTC------GCT---GGCGAAGCTGCCAACGTTAATGCTTCA------AGT---GGTAATGCTGCTAGC---CAA---TAT---GCC---TTC---AAA---GCAATC---AGAATGATTGTTCTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TSVSA-SL------------FWK-LLVGSLVMLIGGYLGE---A------G--Y-----------M----------------------AK------MPA-FAIGMLGWAYIIYLI-----F--A-GEAANVNAS--S-GNAAS-Q-Y-A-F-K-AI-RMIVLV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_KJ929626 [IV-Gamma5-SAR86a] PRGD_OTU174_otuREP_b5d52169f55243dcd8eac615149e38be gb|KJ929626| PRGD_OTU174_otuREP_b5d52169f55243dcd8eac615149e38be, putative proteorhodopsin gene, partial cds. PRGD_OTU174_otuREP_b5d52169f55243dcd8eac615149e38be, putative proteorhodopsin gene, partial cds. KJ929626 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTGATCACTGTTCCACTTCAAATAGTGGAGTTCTACCTCATCCTAGCAGCTGTTACTAGCGTAAGCGCAAGCTTATTCTGGAAACTGCTTGTTGGTTCATTGGTTATGTTAATCGGTGGATACATGGGTGAAGCTGGATATATGGCTAAAATGCCTGCATTTGCAATAGGTATGCTCGGTTGGGCTTACATTATTTACTTGATTTTCGCTGGCGAAGCTGCCAACGTTAATGCTTCAAGTGGTAATGCTGCTAGCCAATATGCCTTCAAAGCAATCAGAATGATTGTTCTTGTT LITVPLQIVEFYLILAAVTSVSASLFWKLLVGSLVMLIGGYMGEAGYMAKMPAFAIGMLGWAYIIYLIFAGEAANVNASSGNAASQYAFKAIRMIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTTCCACTTCAAATAGTGGAGTTCTACCTCATCCTAGCAGCT---------GTT---ACTAGCGTAAGCGCA---AGCTTA------------------------------------TTCTGGAAA---CTGCTTGTTGGTTCATTGGTTATGTTAATCGGTGGATACATGGGTGAA---------GCT------------------GGA------TAT---------------------------------ATG------------------------------------------------------------------GCTAAA------------------ATGCCTGCA---TTTGCAATAGGTATGCTCGGTTGGGCTTACATTATTTACTTGATT---------------TTC------GCT---GGCGAAGCTGCCAACGTTAATGCTTCA------AGT---GGTAATGCTGCTAGC---CAA---TAT---GCC---TTC---AAA---GCAATC---AGAATGATTGTTCTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TSVSA-SL------------FWK-LLVGSLVMLIGGYMGE---A------G--Y-----------M----------------------AK------MPA-FAIGMLGWAYIIYLI-----F--A-GEAANVNAS--S-GNAAS-Q-Y-A-F-K-AI-RMIVLV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_KJ929627 [IV-Gamma5-SAR86a] PRGD_OTU174_1eed975186e5fac48263a52f678c0ada gb|KJ929627| PRGD_OTU174_1eed975186e5fac48263a52f678c0ada, putative proteorhodopsin gene, partial cds. PRGD_OTU174_1eed975186e5fac48263a52f678c0ada, putative proteorhodopsin gene, partial cds. KJ929627 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419) TTGATTACTGTTCCACTTCAAATAGTGGAGTTCTACCTCATCCTAGCAGCTGTTACTAGCGTAAGCGCAAGTTTATTCTGGAAACTGCTTGTTGGTTCATTGGTTATGCTAATCGGTGGATACATGGGTGAAGCTGGATACATGGCTAAAATGCCTGCATTCGTAATTGGTATGGTCGGTTGGGCTTACATTATTTACTTGATCTTCGCTGGCGAAGCTGCCAACGTTAATGCATCAAGTGGAAATGCAGCCTCACAAATGGCTTTCAAATCTATCAGAATGATTGTTCTTGTA LITVPLQIVEFYLILAAVTSVSASLFWKLLVGSLVMLIGGYMGEAGYMAKMPAFVIGMVGWAYIIYLIFAGEAANVNASSGNAASQMAFKSIRMIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTTCCACTTCAAATAGTGGAGTTCTACCTCATCCTAGCAGCT---------GTT---ACTAGCGTAAGCGCA---AGTTTA------------------------------------TTCTGGAAA---CTGCTTGTTGGTTCATTGGTTATGCTAATCGGTGGATACATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------GCTAAA------------------ATGCCTGCA---TTCGTAATTGGTATGGTCGGTTGGGCTTACATTATTTACTTGATC---------------TTC------GCT---GGCGAAGCTGCCAACGTTAATGCATCA------AGT---GGAAATGCAGCCTCA---CAA---ATG---GCT---TTC---AAA---TCTATC---AGAATGATTGTTCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TSVSA-SL------------FWK-LLVGSLVMLIGGYMGE---A------G--Y-----------M----------------------AK------MPA-FVIGMVGWAYIIYLI-----F--A-GEAANVNAS--S-GNAAS-Q-M-A-F-K-SI-RMIVLV-------------------------------------------------------------------------------------------------------------------------------- [IV-Gamma5-SAR86a]_KJ929902 [IV-Gamma5-SAR86a] PRGD_OTU353_otuREP_4dde118a0e879680f4f5fddd52ca9595 gb|KJ929902| PRGD_OTU353_otuREP_4dde118a0e879680f4f5fddd52ca9595, putative proteorhodopsin gene, partial cds. PRGD_OTU353_otuREP_4dde118a0e879680f4f5fddd52ca9595, putative proteorhodopsin gene, partial cds. KJ929902 [[proteorhodopsin super-cluster IV/Gammaproteobacterial-like cluster 5/SAR86_A-I-like subcluster]] proteorhodopsin super-cluster IV Gammaproteobacterial-like cluster 5 SAR86_A-I-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATTACAGTTCCACTGCAAATAGTTGAGTTTTATCTTATTCTTGCAGCTGTTACCTCAGTAAGCGCAGGCTTATTTTGGAAGTTACTCATTGGTTCGCTAGTTATGCTAATTGGTGGATATATGGGTGAAACAGCGATGATTGATAGAACAATTGGCTTTGTTGTTGGAATGGTCGGTTGGGCTTATGTTATCTATCTAATTTTCTTCGGTGAGGCAGCAAATGTTAATGCTTCAAGTGGGAATGCAGCTAGTCAAATGGCTTTTAAAACAATAAGAATGATCGTTCTTGTT LITVPLQIVEFYLILAAVTSVSAGLFWKLLIGSLVMLIGGYMGETAMIDRTIGFVVGMVGWAYVIYLIFFGEAANVNASSGNAASQMAFKTIRMIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACAGTTCCACTGCAAATAGTTGAGTTTTATCTTATTCTTGCAGCT---------GTT---ACCTCAGTAAGCGCA---GGCTTA------------------------------------TTTTGGAAG---TTACTCATTGGTTCGCTAGTTATGCTAATTGGTGGATATATGGGTGAA---------ACA------------------GCG------ATG---------------------------------ATT------------------------------------------------------------------GATAGA------------------ACAATTGGC---TTTGTTGTTGGAATGGTCGGTTGGGCTTATGTTATCTATCTAATT---------------TTC------TTC---GGTGAGGCAGCAAATGTTAATGCTTCA------AGT---GGGAATGCAGCTAGT---CAA---ATG---GCT---TTT---AAA---ACAATA---AGAATGATCGTTCTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TSVSA-GL------------FWK-LLIGSLVMLIGGYMGE---T------A--M-----------I----------------------DR------TIG-FVVGMVGWAYVIYLI-----F--F-GEAANVNAS--S-GNAAS-Q-M-A-F-K-TI-RMIVLV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926638 [IV-Proteo4-d] PRGD_OTU002a_6d03e01b4882e666750f17b2a5602586 gb|KJ926638| PRGD_OTU002a_6d03e01b4882e666750f17b2a5602586, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_6d03e01b4882e666750f17b2a5602586, putative proteorhodopsin gene, partial cds. KJ926638 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACAGTTCCGCTACAGATGGTAGAATTCTACTTTATCCTCGCTGCTGTTATGACGGTCAGCGCTGGCATATTCTGGCGGCTTTTGATCGGGTCGCTCGTGATGTTAGGGGCAGGATACGCTGGTGAAGCTGGCTTAATTAACGCCTGGGCAGGCTTTATTGTAGGTTTGGCAGGATGGGCTTACATCTTGTACGAAATCTTTGCTGGCGAGGCAGGCAAAGCTTCTGCCGAAAAAGCCCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGAGATTAATTGTTACAGTC LITVPLQMVEFYFILAAVMTVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTACAGATGGTAGAATTCTACTTTATCCTCGCTGCT---------GTT---ATGACGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATCGGGTCGCTCGTGATGTTAGGGGCAGGATACGCTGGTGAA---------GCT------------------GGC------TTA---------------------------------ATT------------------------------------------------------------------AACGCC------------------TGGGCAGGC---TTTATTGTAGGTTTGGCAGGATGGGCTTACATCTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAAGCTTCTGCCGAA------AAA---GCCCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---AGATTAATTGTTACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MTVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926651 [IV-Proteo4-d] PRGD_OTU002a_89ecf7e18ae77eebef262c284c31e7c0 gb|KJ926651| PRGD_OTU002a_89ecf7e18ae77eebef262c284c31e7c0, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_89ecf7e18ae77eebef262c284c31e7c0, putative proteorhodopsin gene, partial cds. KJ926651 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTGATTACAGTTCCGCTTCAGATGGTAGAATTCTACTTTATCCTCGCTGCTGTTATGGCGGTCAGTGCTGGCATATTCTGGCGGCTTTTAATCGGGTCGCTCGTGATGTTAGGGGCAGGATACGCTGGTGAAGCTGGCTTAATTAACGCCTGGGCAGGCTTTATTGTAGGTATGGCAGGATGGGCATACATCTTGTACGAAATCTTTGCTGGCGAGGCAGGCAAAGCTTCTGCCGAAAAAGCTCCAGCATCGGTGCAGAGTGCTTTTGGGACCATGCGATTAATTGTTACGGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGMAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACAGTTCCGCTTCAGATGGTAGAATTCTACTTTATCCTCGCTGCT---------GTT---ATGGCGGTCAGTGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTAATCGGGTCGCTCGTGATGTTAGGGGCAGGATACGCTGGTGAA---------GCT------------------GGC------TTA---------------------------------ATT------------------------------------------------------------------AACGCC------------------TGGGCAGGC---TTTATTGTAGGTATGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAAGCTTCTGCCGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCT---TTT---GGG---ACCATG---CGATTAATTGTTACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926606 [IV-Proteo4-d] PRGD_OTU002a_29fd338552e9d30c21560594142a7c6f gb|KJ926606| PRGD_OTU002a_29fd338552e9d30c21560594142a7c6f, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_29fd338552e9d30c21560594142a7c6f, putative proteorhodopsin gene, partial cds. KJ926606 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACAGTTCCACTACAGATGGTAGAATTCTACTTTATCCTCGCTGCTGTTATGGCGGTCAGCGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTCGTGATGTTAGGGGCAGGATACGCTGGTGAGGCTGGCTTAATTAACGCCTGGGCAGGCTTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATCTTTGCTGGCGAAGCAGGCAAAGCTTCTGCCGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTTACTGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCACTACAGATGGTAGAATTCTACTTTATCCTCGCTGCT---------GTT---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTCGTGATGTTAGGGGCAGGATACGCTGGTGAG---------GCT------------------GGC------TTA---------------------------------ATT------------------------------------------------------------------AACGCC------------------TGGGCAGGC---TTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTT------GCT---GGCGAAGCAGGCAAAGCTTCTGCCGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTTACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926716 [IV-Proteo4-d] PRGD_OTU002a_ffaed922b4fe492dbaa5b0d775eb9169 gb|KJ926716| PRGD_OTU002a_ffaed922b4fe492dbaa5b0d775eb9169, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_ffaed922b4fe492dbaa5b0d775eb9169, putative proteorhodopsin gene, partial cds. KJ926716 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) CTGATCACAGTTCCGCTGCAGATGGTAGAATTCTACTTTATCCTCGCTGCTGTTATGGCGGTCAGCGCTGGCATATTCTGGCGGCTGTTGATTGGGTCGCTCGTGATGTTAGGGGCAGGATACGCTGGTGAAGCTGGCTTAATTAACGCCTGGGCAGGCTTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATCTTTGCTGGCGAGGCAGGAAAAGCTTCTGCCGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTTACAGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTTCCGCTGCAGATGGTAGAATTCTACTTTATCCTCGCTGCT---------GTT---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTGTTGATTGGGTCGCTCGTGATGTTAGGGGCAGGATACGCTGGTGAA---------GCT------------------GGC------TTA---------------------------------ATT------------------------------------------------------------------AACGCC------------------TGGGCAGGC---TTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGAAAAGCTTCTGCCGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTTACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926695 [IV-Proteo4-d] PRGD_OTU002a_d7271af78e73d03485633a7f8d1840db gb|KJ926695| PRGD_OTU002a_d7271af78e73d03485633a7f8d1840db, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_d7271af78e73d03485633a7f8d1840db, putative proteorhodopsin gene, partial cds. KJ926695 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTGATTACAGTTCCGCTGCAGATGGTAGAATTCTACTTTATCCTCGCTGCTGTTATGGCGGTCAGCGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTCGTGATGTTAGGGGCAGGATACGCTGGTGAAGCTGGCTTAATTAACGCCTGGGCAGGCTTTATTGTAGGTTTGGCAGGATGGGCATACATCCTGTACGAAATCTTTGCTGGCGAGGCAGGCAAAGCTTCTGCGGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTTACAGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACAGTTCCGCTGCAGATGGTAGAATTCTACTTTATCCTCGCTGCT---------GTT---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTCGTGATGTTAGGGGCAGGATACGCTGGTGAA---------GCT------------------GGC------TTA---------------------------------ATT------------------------------------------------------------------AACGCC------------------TGGGCAGGC---TTTATTGTAGGTTTGGCAGGATGGGCATACATCCTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAAGCTTCTGCGGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTTACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926675 [IV-Proteo4-d] PRGD_OTU002a_b68712a5d6ad99e3f4995675366cd44e gb|KJ926675| PRGD_OTU002a_b68712a5d6ad99e3f4995675366cd44e, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_b68712a5d6ad99e3f4995675366cd44e, putative proteorhodopsin gene, partial cds. KJ926675 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTGATCACAGTTCCGCTGCAGATGGTAGAATTCTACTTTATCCTCGCTGCTGTTATGGCGGTCAGCGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTTGTGATGTTAGGGGCAGGATACGCTGGTGAAGCTGGCTTAATTAACGCCTGGGCAGGCTTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATCTTTGCTGGCGAGGCCGGCAAAGCTTCTGCCGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTTACAGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTGCAGATGGTAGAATTCTACTTTATCCTCGCTGCT---------GTT---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTTGTGATGTTAGGGGCAGGATACGCTGGTGAA---------GCT------------------GGC------TTA---------------------------------ATT------------------------------------------------------------------AACGCC------------------TGGGCAGGC---TTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTT------GCT---GGCGAGGCCGGCAAAGCTTCTGCCGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTTACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926613 [IV-Proteo4-d] PRGD_OTU002a_3ad7ad89668a6c96fa6ce2bedec66505 gb|KJ926613| PRGD_OTU002a_3ad7ad89668a6c96fa6ce2bedec66505, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_3ad7ad89668a6c96fa6ce2bedec66505, putative proteorhodopsin gene, partial cds. KJ926613 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73) TTGATAACAGTTCCGCTGCAGATGGTAGAATTCTACTTTATCCTCGCTGCTGTTATGGCGGTCAGCGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTCGTGATGTTAGGGGCAGGATACGCTGGTGAAGCTGGCTTGATTAACGCTTGGGCAGGCTTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATCTTTGCTGGCGAGGCAGGCAAAGCCTCTGCCGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTGACAGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACAGTTCCGCTGCAGATGGTAGAATTCTACTTTATCCTCGCTGCT---------GTT---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTCGTGATGTTAGGGGCAGGATACGCTGGTGAA---------GCT------------------GGC------TTG---------------------------------ATT------------------------------------------------------------------AACGCT------------------TGGGCAGGC---TTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAAGCCTCTGCCGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTGACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926710 [IV-Proteo4-d] PRGD_OTU002a_eea1bea8cadc7bd2cdc3c81af7f8495c gb|KJ926710| PRGD_OTU002a_eea1bea8cadc7bd2cdc3c81af7f8495c, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_eea1bea8cadc7bd2cdc3c81af7f8495c, putative proteorhodopsin gene, partial cds. KJ926710 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACAGTTCCGCTGCAGATGGTAGAATTCTACTTTATCCTCGCTGCTGTTATGGCAGTCAGCGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTCGTGATGTTAGGGGCGGGATACGCTGGTGAAGCTGGCCTGATTAATGCCTGGGCAGGCTTTATTGTAGGTTTGGCAGGATGGGCATATATCTTGTACGAAATCTTTGCTGGCGAGGCAGGCAAAGCTTCTGCCGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTTACAGTT LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTGCAGATGGTAGAATTCTACTTTATCCTCGCTGCT---------GTT---ATGGCAGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTCGTGATGTTAGGGGCGGGATACGCTGGTGAA---------GCT------------------GGC------CTG---------------------------------ATT------------------------------------------------------------------AATGCC------------------TGGGCAGGC---TTTATTGTAGGTTTGGCAGGATGGGCATATATCTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAAGCTTCTGCCGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926634 [IV-Proteo4-d] PRGD_OTU002a_67262e4c3587d547cb0b86b95bf8923c gb|KJ926634| PRGD_OTU002a_67262e4c3587d547cb0b86b95bf8923c, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_67262e4c3587d547cb0b86b95bf8923c, putative proteorhodopsin gene, partial cds. KJ926634 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATCACAGTTCCGCTGCAGATGGTAGAATTCTACTTTATCCTCGCTGCTGTCATGGCGGTAAGCGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTCGTGATGTTAGGGGCAGGATATGCTGGTGAAGCTGGCTTGATAAACGCCTGGGCAGGCTTTATTGTAGGTTTGGCTGGATGGGCATACATCTTGTACGAAATCTTTGCTGGTGAGGCAGGCAAAGCTTCTGCCGAAAAAGCTCCGGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTTACAGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTGCAGATGGTAGAATTCTACTTTATCCTCGCTGCT---------GTC---ATGGCGGTAAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTCGTGATGTTAGGGGCAGGATATGCTGGTGAA---------GCT------------------GGC------TTG---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCAGGC---TTTATTGTAGGTTTGGCTGGATGGGCATACATCTTGTACGAAATC---------------TTT------GCT---GGTGAGGCAGGCAAAGCTTCTGCCGAA------AAA---GCTCCGGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTTACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926640 [IV-Proteo4-d] PRGD_OTU002a_713bd2558364fa0eae2178c12e98eec6 gb|KJ926640| PRGD_OTU002a_713bd2558364fa0eae2178c12e98eec6, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_713bd2558364fa0eae2178c12e98eec6, putative proteorhodopsin gene, partial cds. KJ926640 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACAGTTCCGCTGCAGATGGTAGAATTCTACTTTATCCTCGCTGCTGTTATGGCGGTCAGCGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTCGTGATGTTAGGGGCAGGATATGCTGGTGAAGCTGGTTTGATAAACGCCTGGGCAGGCTTTATTGTAGGTTTGGCTGGATGGGCATACATCTTGTACGAAATCTTTGCTGGTGAGGCAGGCAAAGCTTCTGCCGAAAAAGCTCCGGCATCGGTGCAAAGTGCGTTTGGGACTATGCGATTAATTGTTACAGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTGCAGATGGTAGAATTCTACTTTATCCTCGCTGCT---------GTT---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTCGTGATGTTAGGGGCAGGATATGCTGGTGAA---------GCT------------------GGT------TTG---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCAGGC---TTTATTGTAGGTTTGGCTGGATGGGCATACATCTTGTACGAAATC---------------TTT------GCT---GGTGAGGCAGGCAAAGCTTCTGCCGAA------AAA---GCTCCGGCATCGGTG---CAA---AGT---GCG---TTT---GGG---ACTATG---CGATTAATTGTTACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926646 [IV-Proteo4-d] PRGD_OTU002a_7e63ea6f3e247ecc932bf79b7d3bc6fa gb|KJ926646| PRGD_OTU002a_7e63ea6f3e247ecc932bf79b7d3bc6fa, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_7e63ea6f3e247ecc932bf79b7d3bc6fa, putative proteorhodopsin gene, partial cds. KJ926646 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACAGTTCCGCTGCAGATGGTAGAATTCTACTTTATCCTCGCTGCTGTTATGGCGGTCAGCGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTCGTGATGTTAGGGGCAGGATACGCCGGTGAAGCTGGCTTGATCAACGCCTGGGCAGGCTTTATTGTAGGTTTGGCTGGATGGGCATACATCTTGTACGAAATCTTTGCTGGCGAGGCAGGCAAAGCTTCTGCCGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGAACCATGCGATTAATTGTTACCGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTGCAGATGGTAGAATTCTACTTTATCCTCGCTGCT---------GTT---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTCGTGATGTTAGGGGCAGGATACGCCGGTGAA---------GCT------------------GGC------TTG---------------------------------ATC------------------------------------------------------------------AACGCC------------------TGGGCAGGC---TTTATTGTAGGTTTGGCTGGATGGGCATACATCTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAAGCTTCTGCCGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGA---ACCATG---CGATTAATTGTTACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926631 [IV-Proteo4-d] PRGD_OTU002a_5e7dff33ecfab37feec705c9ccf3d829 gb|KJ926631| PRGD_OTU002a_5e7dff33ecfab37feec705c9ccf3d829, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_5e7dff33ecfab37feec705c9ccf3d829, putative proteorhodopsin gene, partial cds. KJ926631 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACAGTTCCGCTGCAGATGGTAGAATTCTACTTCATCCTGGCTGCTGTTATGGCGGTCAGCGCTGGCATATTCTGGCGGCTTTTAATTGGGTCGCTCGTGATGTTAGGGGCAGGATACGCTGGTGAAGCTGGCTTAATCAACGCCTGGGCAGGCTTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATCTTTGCCGGAGAAGCAGGCAAAGCTTCTGCTGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGAACCATGCGATTAATTGTTACAGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTGCAGATGGTAGAATTCTACTTCATCCTGGCTGCT---------GTT---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTAATTGGGTCGCTCGTGATGTTAGGGGCAGGATACGCTGGTGAA---------GCT------------------GGC------TTA---------------------------------ATC------------------------------------------------------------------AACGCC------------------TGGGCAGGC---TTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTT------GCC---GGAGAAGCAGGCAAAGCTTCTGCTGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGA---ACCATG---CGATTAATTGTTACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926679 [IV-Proteo4-d] PRGD_OTU002a_be33447992b0dce24cb91c283593c5d6 gb|KJ926679| PRGD_OTU002a_be33447992b0dce24cb91c283593c5d6, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_be33447992b0dce24cb91c283593c5d6, putative proteorhodopsin gene, partial cds. KJ926679 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-14.48, 113.45) TTGATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCTGTCATGGCGGTCAGCGCTGGCATATTCTGGCGCCTTTTGATTGGTTCGCTCGTGATGTTAGGGGCAGGTTACGCTGGTGAAGCCGGCTTAATCAACGCCTGGGCAGGCTTTATTGTAGGATTGGCAGGATGGGCATACATCTTGTACGAAATCTTTGCTGGCGAGGCAGGCAAAGCTTCTGCTGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACGATGCGTTTAATTGTTACAGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCT---------GTC---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGC---CTTTTGATTGGTTCGCTCGTGATGTTAGGGGCAGGTTACGCTGGTGAA---------GCC------------------GGC------TTA---------------------------------ATC------------------------------------------------------------------AACGCC------------------TGGGCAGGC---TTTATTGTAGGATTGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAAGCTTCTGCTGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACGATG---CGTTTAATTGTTACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926620 [IV-Proteo4-d] PRGD_OTU002a_44d5a2178f7caacf3bcb3033329bddbc gb|KJ926620| PRGD_OTU002a_44d5a2178f7caacf3bcb3033329bddbc, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_44d5a2178f7caacf3bcb3033329bddbc, putative proteorhodopsin gene, partial cds. KJ926620 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACGGTTCCGCTGCAGATGGTGGAATTCTACTTTATCCTTGCTGCTGTTATGGCGGTCAGCGCTGGCATATTCTGGCGTCTTTTGATCGGGTCGCTCGTGATGTTAGGGGCAGGTTACGCTGGTGAAGCCGGCTTGATCAACGCCTGGGCAGGCTTCATTGTAGGTTTGGCAGGATGGGCATACATTTTGTACGAAATCTTTGCTGGCGAAGCAGGGAAAGCTTCTGCTGAGAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTTACGGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACGGTTCCGCTGCAGATGGTGGAATTCTACTTTATCCTTGCTGCT---------GTT---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGT---CTTTTGATCGGGTCGCTCGTGATGTTAGGGGCAGGTTACGCTGGTGAA---------GCC------------------GGC------TTG---------------------------------ATC------------------------------------------------------------------AACGCC------------------TGGGCAGGC---TTCATTGTAGGTTTGGCAGGATGGGCATACATTTTGTACGAAATC---------------TTT------GCT---GGCGAAGCAGGGAAAGCTTCTGCTGAG------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTTACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926653 [IV-Proteo4-d] PRGD_OTU002a_8bde6e10185286b96bdd713eb32640e8 gb|KJ926653| PRGD_OTU002a_8bde6e10185286b96bdd713eb32640e8, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_8bde6e10185286b96bdd713eb32640e8, putative proteorhodopsin gene, partial cds. KJ926653 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATCACAGTTCCGCTGCAGATGGTGGAATTCTACTTTATCCTCGCTGCTGTTATGGCGGTCAGCGCTGGCATATTCTGGCGTCTTTTGATCGGGTCGCTCGTGATGTTAGGGGCAGGTTACGCTGGTGAAGCCGGCTTGATCAACGCCTGGGCAGGCTTCATTGTAGGTCTGGCAGGATGGGCATACATTTTGTACGAAATCTTTGCTGGCGAAGCAGGGAAAGCTTCTGCTGAGAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTTACGGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTGCAGATGGTGGAATTCTACTTTATCCTCGCTGCT---------GTT---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGT---CTTTTGATCGGGTCGCTCGTGATGTTAGGGGCAGGTTACGCTGGTGAA---------GCC------------------GGC------TTG---------------------------------ATC------------------------------------------------------------------AACGCC------------------TGGGCAGGC---TTCATTGTAGGTCTGGCAGGATGGGCATACATTTTGTACGAAATC---------------TTT------GCT---GGCGAAGCAGGGAAAGCTTCTGCTGAG------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTTACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926704 [IV-Proteo4-d] PRGD_OTU002a_ea3e52f5ece283e1bcc12bed528bc5fe gb|KJ926704| PRGD_OTU002a_ea3e52f5ece283e1bcc12bed528bc5fe, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_ea3e52f5ece283e1bcc12bed528bc5fe, putative proteorhodopsin gene, partial cds. KJ926704 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACAGTTCCGCTGCAGATGGTGGAATTCTACTTTATCCTCGCTGCTGTTATGGCGGTCAGCGCTGGCATATTCTGGCGTCTTTTGATCGGGTCGCTCGTGATGTTAGGGGCAGGTTACGCTGGTGAAGCCGGCTTAATCAACGCCTGGGCAGGCTTCATTGTAGGATTGGCAGGATGGGCATACATTTTGTACGAAATCTTTGCTGGCGAAGCAGGGAAAGCTTCTGCAGAGAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTTACGGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTGCAGATGGTGGAATTCTACTTTATCCTCGCTGCT---------GTT---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGT---CTTTTGATCGGGTCGCTCGTGATGTTAGGGGCAGGTTACGCTGGTGAA---------GCC------------------GGC------TTA---------------------------------ATC------------------------------------------------------------------AACGCC------------------TGGGCAGGC---TTCATTGTAGGATTGGCAGGATGGGCATACATTTTGTACGAAATC---------------TTT------GCT---GGCGAAGCAGGGAAAGCTTCTGCAGAG------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTTACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926617 [IV-Proteo4-d] PRGD_OTU002a_4246c42e7a972b65591882ad87bca5d1 gb|KJ926617| PRGD_OTU002a_4246c42e7a972b65591882ad87bca5d1, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_4246c42e7a972b65591882ad87bca5d1, putative proteorhodopsin gene, partial cds. KJ926617 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTAATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCTGTTATGGCGGTAAGCGCTGGCATATTCTGGCGGCTTTTAATTGGGTCGCTTGTTATGTTGGGGGCAGGTTATGCTGGTGAAGCCGGCTTAATAAACGCCTGGGCCGGCTTCATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATTTTTGCTGGCGAGGCAGGTAAAGCTTCTGCTGAAAAAGCTCCAGCATCTGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTTACGGTA LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCT---------GTT---ATGGCGGTAAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTAATTGGGTCGCTTGTTATGTTGGGGGCAGGTTATGCTGGTGAA---------GCC------------------GGC------TTA---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCCGGC---TTCATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATT---------------TTT------GCT---GGCGAGGCAGGTAAAGCTTCTGCTGAA------AAA---GCTCCAGCATCTGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTTACGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926626 [IV-Proteo4-d] PRGD_OTU002a_54908bab90d1e337b6987e390413922b gb|KJ926626| PRGD_OTU002a_54908bab90d1e337b6987e390413922b, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_54908bab90d1e337b6987e390413922b, putative proteorhodopsin gene, partial cds. KJ926626 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCTGTTATGGCGGTAAGCGCTGGCATATTCTGGCGGCTTTTAATTGGGTCGCTCGTAATGTTGGGGGCAGGTTATGCTGGTGAAGCCGGCTTAATAAACGCCTGGGCCGGCTTCATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATTTTTGCTGGCGAGGCAGGTAAAGCTTCTGCTGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTTACGGTA LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCT---------GTT---ATGGCGGTAAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTAATTGGGTCGCTCGTAATGTTGGGGGCAGGTTATGCTGGTGAA---------GCC------------------GGC------TTA---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCCGGC---TTCATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATT---------------TTT------GCT---GGCGAGGCAGGTAAAGCTTCTGCTGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTTACGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926681 [IV-Proteo4-d] PRGD_OTU002a_c062a9326e4b1bc2eb65e72845c35995 gb|KJ926681| PRGD_OTU002a_c062a9326e4b1bc2eb65e72845c35995, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_c062a9326e4b1bc2eb65e72845c35995, putative proteorhodopsin gene, partial cds. KJ926681 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTAATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCTGTTATGGCGGTAAGCGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTTGTAATGTTGGGGGCAGGTTATGCTGGTGAAGCCGGCTTAATAAACGCCTGGGCCGGTTTCATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATTTTTGCTGGCGAGGCAGGTAAAGCTTCTGCTGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTTACGGTA LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCT---------GTT---ATGGCGGTAAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTTGTAATGTTGGGGGCAGGTTATGCTGGTGAA---------GCC------------------GGC------TTA---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCCGGT---TTCATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATT---------------TTT------GCT---GGCGAGGCAGGTAAAGCTTCTGCTGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTTACGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926668 [IV-Proteo4-d] PRGD_OTU002a_a72bfaee4b607de9b0b7fe5be2490f70 gb|KJ926668| PRGD_OTU002a_a72bfaee4b607de9b0b7fe5be2490f70, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_a72bfaee4b607de9b0b7fe5be2490f70, putative proteorhodopsin gene, partial cds. KJ926668 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-14.48, 113.45; -33.28, 45.35) TTAATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCTGTTATGGCGGTAAGCGCTGGCATATTCTGGCGACTTTTGATTGGGTCGCTTGTAATGTTGGGGGCAGGTTACGCTGGTGAAGCCGGCTTAATAAACGCCTGGGCCGGCTTCATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATTTTTGCTGGCGAGGCAGGTAAAGCTTCTGCTGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACAATGCGATTAATTGTTACGGTA LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCT---------GTT---ATGGCGGTAAGCGCT---GGCATA------------------------------------TTCTGGCGA---CTTTTGATTGGGTCGCTTGTAATGTTGGGGGCAGGTTACGCTGGTGAA---------GCC------------------GGC------TTA---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCCGGC---TTCATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATT---------------TTT------GCT---GGCGAGGCAGGTAAAGCTTCTGCTGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACAATG---CGATTAATTGTTACGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926683 [IV-Proteo4-d] PRGD_OTU002a_c285fb25aa43cbc0991f560ba14daceb gb|KJ926683| PRGD_OTU002a_c285fb25aa43cbc0991f560ba14daceb, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_c285fb25aa43cbc0991f560ba14daceb, putative proteorhodopsin gene, partial cds. KJ926683 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTCATCCTCGCTGCTGTTATGGCGGTAAGCGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTCGTAATGTTGGGGGCAGGTTACGCTGGTGAAGCCGGCTTAATAAATGCCTGGGCCGGCTTCATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATTTTTGCTGGCGAGGCAGGGAAAGCTTCTGCTGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTTACGGTA LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTCATCCTCGCTGCT---------GTT---ATGGCGGTAAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTCGTAATGTTGGGGGCAGGTTACGCTGGTGAA---------GCC------------------GGC------TTA---------------------------------ATA------------------------------------------------------------------AATGCC------------------TGGGCCGGC---TTCATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATT---------------TTT------GCT---GGCGAGGCAGGGAAAGCTTCTGCTGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTTACGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926700 [IV-Proteo4-d] PRGD_OTU002a_e583b065f43a883ff4e58140753014c7 gb|KJ926700| PRGD_OTU002a_e583b065f43a883ff4e58140753014c7, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_e583b065f43a883ff4e58140753014c7, putative proteorhodopsin gene, partial cds. KJ926700 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (67.49, -168.12), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATCACAGTTCCGCTGCAGATGGTCGAATTTTACTTTATCCTTGCTGCTGTTATGGCGGTCAGCGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTTGTGATGTTAGGAGCGGGTTATGCTGGTGAAGCCGGCTTAATAAACGCTTGGGCAGGCTTCATTGTAGGTATGGCAGGATGGGCATACATCTTGTATGAAATTTTTGCAGGCGAGGCAGGCAAAGCTTCTGCTGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTGATTGTTACGGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGMAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTGCAGATGGTCGAATTTTACTTTATCCTTGCTGCT---------GTT---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTTGTGATGTTAGGAGCGGGTTATGCTGGTGAA---------GCC------------------GGC------TTA---------------------------------ATA------------------------------------------------------------------AACGCT------------------TGGGCAGGC---TTCATTGTAGGTATGGCAGGATGGGCATACATCTTGTATGAAATT---------------TTT------GCA---GGCGAGGCAGGCAAAGCTTCTGCTGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTGATTGTTACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926708 [IV-Proteo4-d] PRGD_OTU002a_ed6eee2d7d835a62834a2b4f487e23bd gb|KJ926708| PRGD_OTU002a_ed6eee2d7d835a62834a2b4f487e23bd, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_ed6eee2d7d835a62834a2b4f487e23bd, putative proteorhodopsin gene, partial cds. KJ926708 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTTGCTGCTGTTATGGCGGTCAGCGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTTGTGATGTTAGGAGCGGGTTATGCTGGTGAAGCTGGCTTAATAAACGCTTGGGCAGGCTTCATTGTAGGTATGGCAGGATGGGCATACATCTTGTATGAAATTTTTGCAGGCGAGGCAGGCAAAGCTTCTGCTGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTTACGGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGMAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTTGCTGCT---------GTT---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTTGTGATGTTAGGAGCGGGTTATGCTGGTGAA---------GCT------------------GGC------TTA---------------------------------ATA------------------------------------------------------------------AACGCT------------------TGGGCAGGC---TTCATTGTAGGTATGGCAGGATGGGCATACATCTTGTATGAAATT---------------TTT------GCA---GGCGAGGCAGGCAAAGCTTCTGCTGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTTACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926662 [IV-Proteo4-d] PRGD_OTU002a_9fd0ebb66a6394c02926832a3c40b64d gb|KJ926662| PRGD_OTU002a_9fd0ebb66a6394c02926832a3c40b64d, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_9fd0ebb66a6394c02926832a3c40b64d, putative proteorhodopsin gene, partial cds. KJ926662 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTGATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTTGCTGCTGTTATGGCGGTCAGCGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTTGTGATGTTAGGAGCGGGTTATGCTGGTGAAGCCGGCTTAATAAACGCTTGGGCAGGCTTCATTGTAGGTTTGGCAGGATGGGCATACATCTTGTATGAAATTTTTGCAGGCGAGGCAGGCAAAGCTTCTGCTGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTTACGGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTTGCTGCT---------GTT---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTTGTGATGTTAGGAGCGGGTTATGCTGGTGAA---------GCC------------------GGC------TTA---------------------------------ATA------------------------------------------------------------------AACGCT------------------TGGGCAGGC---TTCATTGTAGGTTTGGCAGGATGGGCATACATCTTGTATGAAATT---------------TTT------GCA---GGCGAGGCAGGCAAAGCTTCTGCTGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTTACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926615 [IV-Proteo4-d] PRGD_OTU002a_3cf050d36912f6d2b5630d36683119d7 gb|KJ926615| PRGD_OTU002a_3cf050d36912f6d2b5630d36683119d7, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_3cf050d36912f6d2b5630d36683119d7, putative proteorhodopsin gene, partial cds. KJ926615 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73) TTGATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCTGTTATGGCGGTCAGCGCTGGCATATTCTGGCGGCTTTTGATAGGCTCGCTTGTGATGTTAGGAGCGGGTTATGCTGGTGAAGCTGGCTTGATAAACGCCTGGGCAGGCTTCATTGTAGGCTTGGCAGGATGGGCATACATCTTGTACGAAATCTTTGCTGGCGAGGCAGGCAAAGCTTCTGCTGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTTACGGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCT---------GTT---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATAGGCTCGCTTGTGATGTTAGGAGCGGGTTATGCTGGTGAA---------GCT------------------GGC------TTG---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCAGGC---TTCATTGTAGGCTTGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAAGCTTCTGCTGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTTACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926629 [IV-Proteo4-d] PRGD_OTU002a_590bca62f1debdd7dddd1caacf057e65 gb|KJ926629| PRGD_OTU002a_590bca62f1debdd7dddd1caacf057e65, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_590bca62f1debdd7dddd1caacf057e65, putative proteorhodopsin gene, partial cds. KJ926629 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTGATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCTGTTATGGCGGTCAGCGCTGGCATATTCTGGCGGCTTTTGATAGGCTCGCTTGTGATGTTAGGAGCGGGTTATGCTGGTGAAGCTGGCTTGATAAACGCCTGGGCAGGCTTCATTGTAGGTATGGCAGGATGGGCATACATCTTGTACGAAATCTTTGCTGGCGAGGCAGGCAAAGCTTCTGCTGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTTACGGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGMAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCT---------GTT---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATAGGCTCGCTTGTGATGTTAGGAGCGGGTTATGCTGGTGAA---------GCT------------------GGC------TTG---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCAGGC---TTCATTGTAGGTATGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAAGCTTCTGCTGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTTACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926714 [IV-Proteo4-d] PRGD_OTU002a_f9915b86b3d56020be9654eedb42b9b7 gb|KJ926714| PRGD_OTU002a_f9915b86b3d56020be9654eedb42b9b7, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_f9915b86b3d56020be9654eedb42b9b7, putative proteorhodopsin gene, partial cds. KJ926714 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (71.501, 19.8025), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCTGTTATGGCGGTCAGCGCTGGCATATTCTGGCGGCTTTTGATAGGCTCGCTTGTGATGTTAGGAGCGGGTTATGCTGGTGAAGCTGGCTTGATAAACGCCTGGGCAGGCTTCATTGTAGGTTTGGCAGGATGGGCATATATCTTGTACGAAATCTTTGCTGGCGAGGCAGGCAAAGCTTCTGCTGAAAAAGCTCCAGCATCAGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTTACGGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCT---------GTT---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATAGGCTCGCTTGTGATGTTAGGAGCGGGTTATGCTGGTGAA---------GCT------------------GGC------TTG---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCAGGC---TTCATTGTAGGTTTGGCAGGATGGGCATATATCTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAAGCTTCTGCTGAA------AAA---GCTCCAGCATCAGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTTACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926632 [IV-Proteo4-d] PRGD_OTU002a_635ec7c9fabb44f0bd35a01c13276574 gb|KJ926632| PRGD_OTU002a_635ec7c9fabb44f0bd35a01c13276574, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_635ec7c9fabb44f0bd35a01c13276574, putative proteorhodopsin gene, partial cds. KJ926632 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-33.28, 45.35) TTGATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCTGTTATGGCGGTCAGCGCTGGCATATTCTGGCGGCTTTTGATAGGCTCGCTTGTGATGTTAGGAGCGGGTTATGCTGGTGAAGCCGGCTTAATAAACGCCTGGGCAGGCTTCATTGTAGGTCTGGCAGGATGGGCATACATCTTGTACGAAATCTTTGCTGGCGAGGCAGGCAAAGCTTCTGCTGAAAAAGCTCCGGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTTACGGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCT---------GTT---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATAGGCTCGCTTGTGATGTTAGGAGCGGGTTATGCTGGTGAA---------GCC------------------GGC------TTA---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCAGGC---TTCATTGTAGGTCTGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAAGCTTCTGCTGAA------AAA---GCTCCGGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTTACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926701 [IV-Proteo4-d] PRGD_OTU002a_e651ad07b2d4d967ea19b1315e21f1bd gb|KJ926701| PRGD_OTU002a_e651ad07b2d4d967ea19b1315e21f1bd, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_e651ad07b2d4d967ea19b1315e21f1bd, putative proteorhodopsin gene, partial cds. KJ926701 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), North Pacific Ocean (50.06, -139.53) TTGATCACAGTTCCACTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCTGTTATGGCGGTCAGCGCTGGCATATTCTGGCGGCTTTTGATAGGCTCGCTAGTGATGTTAGGAGCGGGTTATGCTGGTGAAGCCGGTTTAATAAACGCCTGGGCAGGCTTCATTGTAGGTCTGGCAGGATGGGCATACATCTTGTACGAAATCTTTGCTGGCGAGGCAGGCAAAGCTTCTGCTGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTTACGGTG LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCACTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCT---------GTT---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATAGGCTCGCTAGTGATGTTAGGAGCGGGTTATGCTGGTGAA---------GCC------------------GGT------TTA---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCAGGC---TTCATTGTAGGTCTGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAAGCTTCTGCTGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTTACGGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926618 [IV-Proteo4-d] PRGD_OTU002a_43f630b4997698fd0827b181b886a0f0 gb|KJ926618| PRGD_OTU002a_43f630b4997698fd0827b181b886a0f0, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_43f630b4997698fd0827b181b886a0f0, putative proteorhodopsin gene, partial cds. KJ926618 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTGATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTCATCCTCGCTGCTGTTATGGCGGTCAGCGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTTGTGATGTTAGGAGCGGGCTATGCTGGTGAAGCCGGGTTAATAAACGCCTGGGCAGGCTTCATTGTAGGTCTGGCAGGATGGGCATATATCTTGTACGAAATCTTTGCTGGCGAGGCAGGCAAAGCTTCTGCTGAAAAAGCTCCAGAATCGGTGCAGAGTGCCTTTGGAACCATGCGATTAATTGTTACGGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPESVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTCATCCTCGCTGCT---------GTT---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTTGTGATGTTAGGAGCGGGCTATGCTGGTGAA---------GCC------------------GGG------TTA---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCAGGC---TTCATTGTAGGTCTGGCAGGATGGGCATATATCTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAAGCTTCTGCTGAA------AAA---GCTCCAGAATCGGTG---CAG---AGT---GCC---TTT---GGA---ACCATG---CGATTAATTGTTACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APESV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926639 [IV-Proteo4-d] PRGD_OTU002a_6dc7910ef3bf77ced55a3d76f2e8624c gb|KJ926639| PRGD_OTU002a_6dc7910ef3bf77ced55a3d76f2e8624c, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_6dc7910ef3bf77ced55a3d76f2e8624c, putative proteorhodopsin gene, partial cds. KJ926639 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTGATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCTTGGCTGCTGTTATGGCGGTCAGCGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTCGTGATGCTAGGGGCAGGTTACGCTGGTGAAGCCGGCTTAATAAACGCCTGGGCAGGCTTCATTGTAGGTTTGGCAGGATGGGCATACATTTTGTATGAAATCTTTGCTGGCGAGGCAGGCAAAGCTTCTGCTGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTTACGGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCTTGGCTGCT---------GTT---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTCGTGATGCTAGGGGCAGGTTACGCTGGTGAA---------GCC------------------GGC------TTA---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCAGGC---TTCATTGTAGGTTTGGCAGGATGGGCATACATTTTGTATGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAAGCTTCTGCTGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTTACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926597 [IV-Proteo4-d] PRGD_OTU002a_10c5e9258e083490eccea72a8e2dcaad gb|KJ926597| PRGD_OTU002a_10c5e9258e083490eccea72a8e2dcaad, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_10c5e9258e083490eccea72a8e2dcaad, putative proteorhodopsin gene, partial cds. KJ926597 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTGATCACAGTTCCGCTGCAGATGGTAGAATTCTACTTTATCCTCGCTGCTGTTATGGCGGTCAGCGCTGGCATCTTCTGGCGGCTTTTGATTGGGTCGCTTGTGATGTTAGGGGCAGGCTACGCTGGTGAAGCTGGCTTAATCAATGCCTGGGCAGGCTTCATTGTAGGTATGGCAGGATGGGCATACATCTTGTACGAAATCTTTGCTGGCGAGGCAGGTAAAGCTTCTGCCGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTTACAGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGMAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTGCAGATGGTAGAATTCTACTTTATCCTCGCTGCT---------GTT---ATGGCGGTCAGCGCT---GGCATC------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTTGTGATGTTAGGGGCAGGCTACGCTGGTGAA---------GCT------------------GGC------TTA---------------------------------ATC------------------------------------------------------------------AATGCC------------------TGGGCAGGC---TTCATTGTAGGTATGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGTAAAGCTTCTGCCGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTTACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926677 [IV-Proteo4-d] PRGD_OTU002a_ba726ec94947715ca08a631ecfb4f971 gb|KJ926677| PRGD_OTU002a_ba726ec94947715ca08a631ecfb4f971, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_ba726ec94947715ca08a631ecfb4f971, putative proteorhodopsin gene, partial cds. KJ926677 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCTGTTATGGCGGTCAGCGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTCGTGATGTTAGGGGCAGGTTACGCTGGCGAAGCCGGTTTAATAAATGCCTGGGCAGGCTTCATAGTAGGTATGGCTGGATGGGCATACATCTTGTACGAAATCTTTGCTGGCGAGGCAGGCAAAGCTTCTGCCGAAAAAGCTCCCGCATCGGTGCAGAGCGCCTTTGGGACTATGCGATTAATTGTTACAGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGMAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCT---------GTT---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTCGTGATGTTAGGGGCAGGTTACGCTGGCGAA---------GCC------------------GGT------TTA---------------------------------ATA------------------------------------------------------------------AATGCC------------------TGGGCAGGC---TTCATAGTAGGTATGGCTGGATGGGCATACATCTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAAGCTTCTGCCGAA------AAA---GCTCCCGCATCGGTG---CAG---AGC---GCC---TTT---GGG---ACTATG---CGATTAATTGTTACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926616 [IV-Proteo4-d] PRGD_OTU002a_41e08ed43002315c87bef53113ec3a31 gb|KJ926616| PRGD_OTU002a_41e08ed43002315c87bef53113ec3a31, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_41e08ed43002315c87bef53113ec3a31, putative proteorhodopsin gene, partial cds. KJ926616 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTTGCTGCTGTTATGGCGGTAAGCGCTGGCATATTCTGGCGGCTTTTGATCGGGTCGCTCGTAATGTTAGGTGCAGGTTACGCTGGTGAAGCCGGCTTAATAAACGCCTGGGCAGGCTTCATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATCTTTGCTGGCGAGGCAGGCAAAGCTTCTGCTGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTTACTGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTTGCTGCT---------GTT---ATGGCGGTAAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATCGGGTCGCTCGTAATGTTAGGTGCAGGTTACGCTGGTGAA---------GCC------------------GGC------TTA---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCAGGC---TTCATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAAGCTTCTGCTGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTTACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926664 [IV-Proteo4-d] PRGD_OTU002a_a1d3e077a29763767f5e07e6a1e8620d gb|KJ926664| PRGD_OTU002a_a1d3e077a29763767f5e07e6a1e8620d, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_a1d3e077a29763767f5e07e6a1e8620d, putative proteorhodopsin gene, partial cds. KJ926664 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTAATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCTGTTATGGCGGTAAGCGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTCGTAATGTTAGGTGCAGGTTACGCTGGTGAAGCCGGCTTAATAAACGCCTGGGCAGGTTTCATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATCTTTGCTGGCGAGGCAGGCAAAGCTTCTGCTGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTTACTGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCT---------GTT---ATGGCGGTAAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTCGTAATGTTAGGTGCAGGTTACGCTGGTGAA---------GCC------------------GGC------TTA---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCAGGT---TTCATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAAGCTTCTGCTGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTTACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926654 [IV-Proteo4-d] PRGD_OTU002a_8d490bffe5e9b812435e77952b0f7bb6 gb|KJ926654| PRGD_OTU002a_8d490bffe5e9b812435e77952b0f7bb6, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_8d490bffe5e9b812435e77952b0f7bb6, putative proteorhodopsin gene, partial cds. KJ926654 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) TTAATTACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCTGTTATGGCGGTAAGCGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTTGTAATGTTAGGTGCAGGTTACGCTGGTGAAGCCGGCTTAATAAACGCTTGGGCAGGCTTCATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATCTTTGCTGGCGAGGCAGGCAAAGCTTCTGCTGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTTACTGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCT---------GTT---ATGGCGGTAAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTTGTAATGTTAGGTGCAGGTTACGCTGGTGAA---------GCC------------------GGC------TTA---------------------------------ATA------------------------------------------------------------------AACGCT------------------TGGGCAGGC---TTCATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAAGCTTCTGCTGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTTACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926711 [IV-Proteo4-d] PRGD_OTU002a_f395fabfc5c3e2534bc5f66a7475114f gb|KJ926711| PRGD_OTU002a_f395fabfc5c3e2534bc5f66a7475114f, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_f395fabfc5c3e2534bc5f66a7475114f, putative proteorhodopsin gene, partial cds. KJ926711 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTAATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTTGCTGCTGTTATGGCTGTAAGCGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTCGTAATGTTAGGGGCAGGTTACGCTGGTGAAGCCGGCTTAATAAACGCCTGGGCCGGCTTCATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATTTTTGCTGGCGAGGCAGGCAAAGCTTCTGCTGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTTACGGTA LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTTGCTGCT---------GTT---ATGGCTGTAAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTCGTAATGTTAGGGGCAGGTTACGCTGGTGAA---------GCC------------------GGC------TTA---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCCGGC---TTCATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATT---------------TTT------GCT---GGCGAGGCAGGCAAAGCTTCTGCTGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTTACGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926648 [IV-Proteo4-d] PRGD_OTU002a_83346108b50d22fc24b3cc4ae07ed7af gb|KJ926648| PRGD_OTU002a_83346108b50d22fc24b3cc4ae07ed7af, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_83346108b50d22fc24b3cc4ae07ed7af, putative proteorhodopsin gene, partial cds. KJ926648 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTAATCACAGTGCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCGGTTATGGCGGTAAGCGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTAGTAATGTTAGGGGCTGGTTATGCCGGTGAAGCCGGCTTAATAAACGCCTGGGCAGGCTTCATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATCTTTGCTGGCGAGGCAGGCAAAGCTTCTGCTGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTTACGGTA LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTGCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCG---------GTT---ATGGCGGTAAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTAGTAATGTTAGGGGCTGGTTATGCCGGTGAA---------GCC------------------GGC------TTA---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCAGGC---TTCATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAAGCTTCTGCTGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTTACGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926663 [IV-Proteo4-d] PRGD_OTU002a_a0159c43856ce9babdc1d553e75c73c8 gb|KJ926663| PRGD_OTU002a_a0159c43856ce9babdc1d553e75c73c8, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_a0159c43856ce9babdc1d553e75c73c8, putative proteorhodopsin gene, partial cds. KJ926663 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCTGTTATGGCGGTAAGCGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTCGTAATGTTAGGGGCTGGTTACGCTGGTGAAGCCGGCTTAATAAACGCCTGGGCAGGTTTCATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATCTTTGCTGGCGAGGCAGGCAAAGCTTCTGCTGAAAAAGCTCCAGCATCGGTACAGAGTGCCTTTGGGACTATGCGATTAATTGTTACGGTA LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCT---------GTT---ATGGCGGTAAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTCGTAATGTTAGGGGCTGGTTACGCTGGTGAA---------GCC------------------GGC------TTA---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCAGGT---TTCATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAAGCTTCTGCTGAA------AAA---GCTCCAGCATCGGTA---CAG---AGT---GCC---TTT---GGG---ACTATG---CGATTAATTGTTACGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926594 [IV-Proteo4-d] PRGD_OTU002a_0ce545f9fe264d04e62f7040046dbfe1 gb|KJ926594| PRGD_OTU002a_0ce545f9fe264d04e62f7040046dbfe1, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_0ce545f9fe264d04e62f7040046dbfe1, putative proteorhodopsin gene, partial cds. KJ926594 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTAATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCTGTTATGGCGGTAAGCGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTCGTAATGTTAGGGGCAGGTTACGCTGGTGAAGCCGGCTTAATAAATGCCTGGGCAGGCTTCATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATCTTTGCTGGCGAGGCAGGCAAAGCTTCTGCTGAAAAAGCTCCAGCATCTGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTTACGGTA LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCT---------GTT---ATGGCGGTAAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTCGTAATGTTAGGGGCAGGTTACGCTGGTGAA---------GCC------------------GGC------TTA---------------------------------ATA------------------------------------------------------------------AATGCC------------------TGGGCAGGC---TTCATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAAGCTTCTGCTGAA------AAA---GCTCCAGCATCTGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTTACGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926589 [IV-Proteo4-d] PRGD_OTU002a_08f3d76d7e988a6cfc032f58df0999b7 gb|KJ926589| PRGD_OTU002a_08f3d76d7e988a6cfc032f58df0999b7, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_08f3d76d7e988a6cfc032f58df0999b7, putative proteorhodopsin gene, partial cds. KJ926589 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTAATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCTGTTATGGCGGTAAGCGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTCGTAATGTTAGGGGCAGGTTACGCTGGTGAAGCCGGCTTAATAAATGCCTGGGCAGGCTTCATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATCTTTGCTGGCGAGGCAGGTAAAGCTTCTGCTGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTTACGGTA LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCT---------GTT---ATGGCGGTAAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTCGTAATGTTAGGGGCAGGTTACGCTGGTGAA---------GCC------------------GGC------TTA---------------------------------ATA------------------------------------------------------------------AATGCC------------------TGGGCAGGC---TTCATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGTAAAGCTTCTGCTGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTTACGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926591 [IV-Proteo4-d] PRGD_OTU002a_0aaa2cd55ae6f4eb8cc3326fb4e7d784 gb|KJ926591| PRGD_OTU002a_0aaa2cd55ae6f4eb8cc3326fb4e7d784, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_0aaa2cd55ae6f4eb8cc3326fb4e7d784, putative proteorhodopsin gene, partial cds. KJ926591 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-14.48, 113.45) TTGATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCTGTCATGGCGGTCAGCGCTGGCATATTCTGGCGGCTTTTGATAGGCTCGCTCGTGATGTTAGGGGCAGGTTACGCTGGTGAAGCCGGCTTAATAAATGCCTGGGCAGGCTTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATCTTTGCTGGCGAGGCAGGCAAAGCTTCTGCTGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTCACGGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCT---------GTC---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATAGGCTCGCTCGTGATGTTAGGGGCAGGTTACGCTGGTGAA---------GCC------------------GGC------TTA---------------------------------ATA------------------------------------------------------------------AATGCC------------------TGGGCAGGC---TTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAAGCTTCTGCTGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTCACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926658 [IV-Proteo4-d] PRGD_OTU002a_97dddc04dc4e94dde6f71daaffe4b86f gb|KJ926658| PRGD_OTU002a_97dddc04dc4e94dde6f71daaffe4b86f, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_97dddc04dc4e94dde6f71daaffe4b86f, putative proteorhodopsin gene, partial cds. KJ926658 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) TTGATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCTGTTATGGCGGTCAGCGCTGGCATATTCTGGCGGCTTTTGATAGGCTCGCTCGTGATGTTAGGGGCAGGTTACGCTGGTGAAGCCGGCTTAATAAATGCTTGGGCAGGCTTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATCTTTGCTGGCGAGGCAGGCAAAGCTTCTGCTGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTGACGGTT LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCT---------GTT---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATAGGCTCGCTCGTGATGTTAGGGGCAGGTTACGCTGGTGAA---------GCC------------------GGC------TTA---------------------------------ATA------------------------------------------------------------------AATGCT------------------TGGGCAGGC---TTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAAGCTTCTGCTGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTGACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926633 [IV-Proteo4-d] PRGD_OTU002a_660ca6b3da9230a5bed92729e249fb36 gb|KJ926633| PRGD_OTU002a_660ca6b3da9230a5bed92729e249fb36, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_660ca6b3da9230a5bed92729e249fb36, putative proteorhodopsin gene, partial cds. KJ926633 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTGATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCTGTTATGGCGGTCAGCGCTGGCATATTCTGGCGGCTTTTGATAGGCTCGCTCGTGATGTTAGGGGCAGGTTACGCTGGTGAAGCTGGCTTAATAAATGCCTGGGCAGGCTTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATCTTTGCTGGCGAGGCAGGCAAAGCTTCTGCTGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTTACGGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCT---------GTT---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATAGGCTCGCTCGTGATGTTAGGGGCAGGTTACGCTGGTGAA---------GCT------------------GGC------TTA---------------------------------ATA------------------------------------------------------------------AATGCC------------------TGGGCAGGC---TTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAAGCTTCTGCTGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTTACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926686 [IV-Proteo4-d] PRGD_OTU002a_cd3ca082991ec9cc8ee48ee9dd9ac526 gb|KJ926686| PRGD_OTU002a_cd3ca082991ec9cc8ee48ee9dd9ac526, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_cd3ca082991ec9cc8ee48ee9dd9ac526, putative proteorhodopsin gene, partial cds. KJ926686 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCTGTTATGGCGGTCAGCGCTGGCATATTCTGGCGGCTTTTGATAGGCTCGCTCGTGATGTTAGGGGCAGGTTACGCCGGTGAAGCCGGCTTAATAAATGCCTGGGCAGGCTTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATCTTTGCTGGCGAGGCAGGCAAAGCTTCTGCTGAAAAAGCTCCGGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTTACGGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCT---------GTT---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATAGGCTCGCTCGTGATGTTAGGGGCAGGTTACGCCGGTGAA---------GCC------------------GGC------TTA---------------------------------ATA------------------------------------------------------------------AATGCC------------------TGGGCAGGC---TTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAAGCTTCTGCTGAA------AAA---GCTCCGGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTTACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926707 [IV-Proteo4-d] PRGD_OTU002a_ecaf4b5ce4a6f5b17e7e680fa4f92b52 gb|KJ926707| PRGD_OTU002a_ecaf4b5ce4a6f5b17e7e680fa4f92b52, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_ecaf4b5ce4a6f5b17e7e680fa4f92b52, putative proteorhodopsin gene, partial cds. KJ926707 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Mediterranean Sea (38.6308, 7.9097) TTGATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCTGTTATGGCGGTCAGTGCTGGCATATTCTGGCGGCTTTTGATAGGCTCGCTCGTGATGTTAGGGGCAGGTTACGCTGGTGAAGCCGGCTTAATAAATGCCTGGGCAGGCTTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATCTTTGCTGGTGAGGCAGGCAAGGCTTCTGCTGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACTATGCGATTAATTGTTACGGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCT---------GTT---ATGGCGGTCAGTGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATAGGCTCGCTCGTGATGTTAGGGGCAGGTTACGCTGGTGAA---------GCC------------------GGC------TTA---------------------------------ATA------------------------------------------------------------------AATGCC------------------TGGGCAGGC---TTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTT------GCT---GGTGAGGCAGGCAAGGCTTCTGCTGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACTATG---CGATTAATTGTTACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926705 [IV-Proteo4-d] PRGD_OTU002a_eb3df452f492b4f1595d52b71c31eb5e gb|KJ926705| PRGD_OTU002a_eb3df452f492b4f1595d52b71c31eb5e, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_eb3df452f492b4f1595d52b71c31eb5e, putative proteorhodopsin gene, partial cds. KJ926705 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTGATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCTGTCATGGCGGTCAGTGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTCGTGATGTTAGGGGCAGGTTACGCTGGTGAAGCTGGCTTAATAAATGCCTGGGCAGGTTTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATCTTTGCTGGCGAGGCAGGCAAAGCTTCTGCCGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTTACGGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCT---------GTC---ATGGCGGTCAGTGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTCGTGATGTTAGGGGCAGGTTACGCTGGTGAA---------GCT------------------GGC------TTA---------------------------------ATA------------------------------------------------------------------AATGCC------------------TGGGCAGGT---TTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAAGCTTCTGCCGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTTACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926709 [IV-Proteo4-d] PRGD_OTU002a_ee4be5c304f1e8d9891cf5ce9c0a7e55 gb|KJ926709| PRGD_OTU002a_ee4be5c304f1e8d9891cf5ce9c0a7e55, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_ee4be5c304f1e8d9891cf5ce9c0a7e55, putative proteorhodopsin gene, partial cds. KJ926709 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Mediterranean Sea (33.762, 29.175), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCTGTCATGGCGGTCAGTGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTCGTGATGTTAGGGGCAGGTTACGCTGGTGAAGCTGGCTTAATAAATGCCTGGGCAGGTTTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATCTTTGCTGGCGAGGCAGGCAAAGCTTCTGCCGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGAACAATGCGTTTAATTGTGACGGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCT---------GTC---ATGGCGGTCAGTGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTCGTGATGTTAGGGGCAGGTTACGCTGGTGAA---------GCT------------------GGC------TTA---------------------------------ATA------------------------------------------------------------------AATGCC------------------TGGGCAGGT---TTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAAGCTTCTGCCGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGA---ACAATG---CGTTTAATTGTGACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926703 [IV-Proteo4-d] PRGD_OTU002a_e763081c12c5b49190aa9d19692ebcc2 gb|KJ926703| PRGD_OTU002a_e763081c12c5b49190aa9d19692ebcc2, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_e763081c12c5b49190aa9d19692ebcc2, putative proteorhodopsin gene, partial cds. KJ926703 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Mediterranean Sea (33.762, 29.175) TTGATCACAGTTCCGCTTCAGATGGTCGAATTCTACTTTATCCTCGCTGCCGTCATGGCGGTCAGCGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTCGTGATGTTGGGTGCAGGTTACGCAGGTGAAGCCGGCTTAATAAATGCCTGGGCAGGCTTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATCTTCGCTGGTGAGGCGGGCAGAGCGTCTGCCGAAAAAGCTCCAGCATCGGTGCAGAGCGCCTTCGGAACTATGCGATTAATCGTTACGGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGRASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTTCAGATGGTCGAATTCTACTTTATCCTCGCTGCC---------GTC---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTCGTGATGTTGGGTGCAGGTTACGCAGGTGAA---------GCC------------------GGC------TTA---------------------------------ATA------------------------------------------------------------------AATGCC------------------TGGGCAGGC---TTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTC------GCT---GGTGAGGCGGGCAGAGCGTCTGCCGAA------AAA---GCTCCAGCATCGGTG---CAG---AGC---GCC---TTC---GGA---ACTATG---CGATTAATCGTTACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGRASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926712 [IV-Proteo4-d] PRGD_OTU002a_f63f71a31e9236c6ad05659adad6efda gb|KJ926712| PRGD_OTU002a_f63f71a31e9236c6ad05659adad6efda, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_f63f71a31e9236c6ad05659adad6efda, putative proteorhodopsin gene, partial cds. KJ926712 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) TTGATCACAGTTCCGCTTCAGATGGTCGAATTCTACTTTATCCTCGCTGCCGTCATGGCGGTCAGCGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTCGTGATGTTGGGTGCAGGTTACGCCGGTGAAGCCGGCTTAATAAATGCTTGGGCAGGCTTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATCTTCGCCGGTGAGGCGGGCAGAGCGTCTGCCGAAAAAGCTCCAGCATCTGTGCAGAGCGCCTTCGGAACTATGCGATTAATCGTTACGGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGRASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTTCAGATGGTCGAATTCTACTTTATCCTCGCTGCC---------GTC---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTCGTGATGTTGGGTGCAGGTTACGCCGGTGAA---------GCC------------------GGC------TTA---------------------------------ATA------------------------------------------------------------------AATGCT------------------TGGGCAGGC---TTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTC------GCC---GGTGAGGCGGGCAGAGCGTCTGCCGAA------AAA---GCTCCAGCATCTGTG---CAG---AGC---GCC---TTC---GGA---ACTATG---CGATTAATCGTTACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGRASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926604 [IV-Proteo4-d] PRGD_OTU002a_251e898dc3f4097160030e3af7176b8a gb|KJ926604| PRGD_OTU002a_251e898dc3f4097160030e3af7176b8a, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_251e898dc3f4097160030e3af7176b8a, putative proteorhodopsin gene, partial cds. KJ926604 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-14.48, 113.45) TTGATCACAGTTCCGCTTCAGATGGTCGAATTCTACTTTATCCTCGCTGCCGTCATGGCGGTCAGCGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTCGTGATGTTGGGCGCAGGTTACGCAGGCGAAGCCGGCTTAATAAATGCCTGGGCAGGGTTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATCTTCGCTGGTGAGGCGGGCAGAGCGTCTGCCGAAAAAGCTCCAGCATCGGTGCAGAGCGCCTTCGGAACTATGCGATTAATCGTTACGGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGRASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTTCAGATGGTCGAATTCTACTTTATCCTCGCTGCC---------GTC---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTCGTGATGTTGGGCGCAGGTTACGCAGGCGAA---------GCC------------------GGC------TTA---------------------------------ATA------------------------------------------------------------------AATGCC------------------TGGGCAGGG---TTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTC------GCT---GGTGAGGCGGGCAGAGCGTCTGCCGAA------AAA---GCTCCAGCATCGGTG---CAG---AGC---GCC---TTC---GGA---ACTATG---CGATTAATCGTTACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGRASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926596 [IV-Proteo4-d] PRGD_OTU002a_10a9d26737f3a5203fbda9a816d32bd8 gb|KJ926596| PRGD_OTU002a_10a9d26737f3a5203fbda9a816d32bd8, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_10a9d26737f3a5203fbda9a816d32bd8, putative proteorhodopsin gene, partial cds. KJ926596 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTGATCACAGTTCCGCTTCAGATGGTCGAATTCTACTTTATCCTCGCTGCCGTTATGGCAGTCAGCGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTCGTGATGTTGGGCGCAGGATACGCAGGTGAAGCCGGCTTAATAAACGCCTGGGCAGGCTTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATCTTTGCTGGTGAGGCGGGCAGAGCGTCAGCCGAAAAAGCTCCGGCATCGGTGCAGAGTGCCTTCGGAACTATGCGATTAATCGTGACGGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGRASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTTCAGATGGTCGAATTCTACTTTATCCTCGCTGCC---------GTT---ATGGCAGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTCGTGATGTTGGGCGCAGGATACGCAGGTGAA---------GCC------------------GGC------TTA---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCAGGC---TTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTT------GCT---GGTGAGGCGGGCAGAGCGTCAGCCGAA------AAA---GCTCCGGCATCGGTG---CAG---AGT---GCC---TTC---GGA---ACTATG---CGATTAATCGTGACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGRASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926671 [IV-Proteo4-d] PRGD_OTU002a_abab547d52fd85c599516694b8092cfb gb|KJ926671| PRGD_OTU002a_abab547d52fd85c599516694b8092cfb, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_abab547d52fd85c599516694b8092cfb, putative proteorhodopsin gene, partial cds. KJ926671 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Atlantic side (71.501, 19.8025), Mediterranean Sea (33.762, 29.175), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTGATCACAGTTCCGCTTCAGATGGTCGAATTCTACTTTATCCTCGCTGCCGTTATGGCAGTCAGCGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTCGTGATGTTGGGCGCAGGATACGCAGGTGAAGCCGGCTTAATAAATGCCTGGGCAGGCTTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATCTTCGCTGGTGAGGCGGGCAGAGCGTCTGCCGAAAAAGCTCCGGCATCGGTGCAGAGTGCCTTCGGAACTATGCGATTAATCGTGACGGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGRASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTTCAGATGGTCGAATTCTACTTTATCCTCGCTGCC---------GTT---ATGGCAGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTCGTGATGTTGGGCGCAGGATACGCAGGTGAA---------GCC------------------GGC------TTA---------------------------------ATA------------------------------------------------------------------AATGCC------------------TGGGCAGGC---TTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTC------GCT---GGTGAGGCGGGCAGAGCGTCTGCCGAA------AAA---GCTCCGGCATCGGTG---CAG---AGT---GCC---TTC---GGA---ACTATG---CGATTAATCGTGACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGRASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926635 [IV-Proteo4-d] PRGD_OTU002a_686c0a907ea8b073972ff4a544c103dc gb|KJ926635| PRGD_OTU002a_686c0a907ea8b073972ff4a544c103dc, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_686c0a907ea8b073972ff4a544c103dc, putative proteorhodopsin gene, partial cds. KJ926635 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTAATCACAGTTCCGCTTCAGATGGTCGAATTCTACTTTATCCTCGCTGCTGTTATGGCGGTCAGCGCTGGCATATTCTGGCGGCTGTTGATTGGGTCGCTCGTGATGTTGGGGGCAGGCTACGCAGGTGAAGCCGGCTTAATAAATGCCTGGGCAGGCTTCATTGTAGGCTTGGCAGGATGGGCATACATCTTGTACGAAATCTTCGCTGGTGAGGCGGGCAGAGCGTCTGCCGAAAAAGCTCCAGCATCGGTGCAGAGCGCCTTCGGAACTATGCGATTAATTGTTACCGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGRASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTTCCGCTTCAGATGGTCGAATTCTACTTTATCCTCGCTGCT---------GTT---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTGTTGATTGGGTCGCTCGTGATGTTGGGGGCAGGCTACGCAGGTGAA---------GCC------------------GGC------TTA---------------------------------ATA------------------------------------------------------------------AATGCC------------------TGGGCAGGC---TTCATTGTAGGCTTGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTC------GCT---GGTGAGGCGGGCAGAGCGTCTGCCGAA------AAA---GCTCCAGCATCGGTG---CAG---AGC---GCC---TTC---GGA---ACTATG---CGATTAATTGTTACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGRASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926676 [IV-Proteo4-d] PRGD_OTU002a_b8c75837966adfda10732c28324ff024 gb|KJ926676| PRGD_OTU002a_b8c75837966adfda10732c28324ff024, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_b8c75837966adfda10732c28324ff024, putative proteorhodopsin gene, partial cds. KJ926676 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTAATCACAGTTCCGCTTCAGATGGTCGAATTCTACTTTATCCTCGCTGCTGTTATGGCGGTCAGCGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTCGTGATGTTGGGGGCAGGCTACGCAGGTGAAGCCGGCTTAATAAATGCCTGGGCAGGCTTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATCTTCGCTGGTGAGGCGGGCAGAGCGTCTGCCGAAAAAGCTCCAGCATCGGTGCAGAGCGCCTTTGGAACTATGCGATTAATTGTTACCGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGRASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTTCCGCTTCAGATGGTCGAATTCTACTTTATCCTCGCTGCT---------GTT---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTCGTGATGTTGGGGGCAGGCTACGCAGGTGAA---------GCC------------------GGC------TTA---------------------------------ATA------------------------------------------------------------------AATGCC------------------TGGGCAGGC---TTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTC------GCT---GGTGAGGCGGGCAGAGCGTCTGCCGAA------AAA---GCTCCAGCATCGGTG---CAG---AGC---GCC---TTT---GGA---ACTATG---CGATTAATTGTTACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGRASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926659 [IV-Proteo4-d] PRGD_OTU002a_9974102514e17a9feb33ba9453a5ff35 gb|KJ926659| PRGD_OTU002a_9974102514e17a9feb33ba9453a5ff35, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_9974102514e17a9feb33ba9453a5ff35, putative proteorhodopsin gene, partial cds. KJ926659 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTAATCACAGTTCCGCTTCAGATGGTCGAATTCTACTTTATCCTCGCTGCTGTTATGGCGGTCAGCGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTCGTGATGTTGGGGGCAGGCTATGCAGGTGAAGCCGGCTTAATAAATGCCTGGGCAGGCTTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATCTTCGCTGGTGAGGCGGGCAGAGCGTCTGCCGAAAAAGCTCCAGCATCGGTGCAGAGCGCCTTCGGAACTATGCGATTAATTGTTACCGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGRASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTTCCGCTTCAGATGGTCGAATTCTACTTTATCCTCGCTGCT---------GTT---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTCGTGATGTTGGGGGCAGGCTATGCAGGTGAA---------GCC------------------GGC------TTA---------------------------------ATA------------------------------------------------------------------AATGCC------------------TGGGCAGGC---TTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTC------GCT---GGTGAGGCGGGCAGAGCGTCTGCCGAA------AAA---GCTCCAGCATCGGTG---CAG---AGC---GCC---TTC---GGA---ACTATG---CGATTAATTGTTACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGRASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926628 [IV-Proteo4-d] PRGD_OTU002a_580f146154ff09f202ea655bf36868f6 gb|KJ926628| PRGD_OTU002a_580f146154ff09f202ea655bf36868f6, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_580f146154ff09f202ea655bf36868f6, putative proteorhodopsin gene, partial cds. KJ926628 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-14.48, 113.45) TTGATCACAGTTCCACTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCCGTTATGGCGGTCAGTGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTCGTAATGTTAGGGGCAGGTTATGCTGGGGAAGCCGGCTTAATAAATGCCTGGGCCGGCTTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATCTTTGCTGGTGAGGCGGGCAGAGCTTCTGCCGAAAAAGCTCCAGCATCGGTGCAGAGCGCCTTTGGAACCATGCGATTAATTGTTACGGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGRASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCACTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCC---------GTT---ATGGCGGTCAGTGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTCGTAATGTTAGGGGCAGGTTATGCTGGGGAA---------GCC------------------GGC------TTA---------------------------------ATA------------------------------------------------------------------AATGCC------------------TGGGCCGGC---TTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTT------GCT---GGTGAGGCGGGCAGAGCTTCTGCCGAA------AAA---GCTCCAGCATCGGTG---CAG---AGC---GCC---TTT---GGA---ACCATG---CGATTAATTGTTACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGRASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926667 [IV-Proteo4-d] PRGD_OTU002a_a6a2e6cf12cb6de48489284986bb5629 gb|KJ926667| PRGD_OTU002a_a6a2e6cf12cb6de48489284986bb5629, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_a6a2e6cf12cb6de48489284986bb5629, putative proteorhodopsin gene, partial cds. KJ926667 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTGATCACAGTTCCGCTACAGATGGTCGAATTCTACTTTATCCTCGCTGCCGTTATGGCGGTCAGTGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTCGTAATGTTAGGGGCAGGTTATGCTGGGGAAGCCGGCTTAATAAATGCTTGGGCCGGCTTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATCTTCGCTGGTGAGGCGGGCCGAGCTTCTGCAGAAAAAGCTCCAGCATCGGTGCAGAGCGCCTTTGGAACCATGCGATTAATTGTTACGGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGRASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTACAGATGGTCGAATTCTACTTTATCCTCGCTGCC---------GTT---ATGGCGGTCAGTGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTCGTAATGTTAGGGGCAGGTTATGCTGGGGAA---------GCC------------------GGC------TTA---------------------------------ATA------------------------------------------------------------------AATGCT------------------TGGGCCGGC---TTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTC------GCT---GGTGAGGCGGGCCGAGCTTCTGCAGAA------AAA---GCTCCAGCATCGGTG---CAG---AGC---GCC---TTT---GGA---ACCATG---CGATTAATTGTTACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGRASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926607 [IV-Proteo4-d] PRGD_OTU002a_3411ec67a557942a5e762147327ba3c7 gb|KJ926607| PRGD_OTU002a_3411ec67a557942a5e762147327ba3c7, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_3411ec67a557942a5e762147327ba3c7, putative proteorhodopsin gene, partial cds. KJ926607 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683), Mediterranean Sea (33.935, 18.508) TTGATCACAGTTCCGCTTCAGATGGTCGAATTCTACTTCATCCTCGCTGCCGTTATGGCGGTCAGCGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTCGTAATGTTAGGAGCGGGTTACGCAGGTGAAGCCGGGTTAATAAATGCCTGGGCGGGCTTTATTGTAGGTTTGGCAGGATGGGCATACATTTTGTACGAAATCTTTGCTGGCGAGGCAGGCAAAGCTTCTGCCGAAAAAGCTCCAGCATCGGTGCAGAGCGCCTTTGGAACCATGCGATTAATTGTTACTGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTTCAGATGGTCGAATTCTACTTCATCCTCGCTGCC---------GTT---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTCGTAATGTTAGGAGCGGGTTACGCAGGTGAA---------GCC------------------GGG------TTA---------------------------------ATA------------------------------------------------------------------AATGCC------------------TGGGCGGGC---TTTATTGTAGGTTTGGCAGGATGGGCATACATTTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAAGCTTCTGCCGAA------AAA---GCTCCAGCATCGGTG---CAG---AGC---GCC---TTT---GGA---ACCATG---CGATTAATTGTTACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926619 [IV-Proteo4-d] PRGD_OTU002a_44212e3cc013dbf936c982d684c60e78 gb|KJ926619| PRGD_OTU002a_44212e3cc013dbf936c982d684c60e78, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_44212e3cc013dbf936c982d684c60e78, putative proteorhodopsin gene, partial cds. KJ926619 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTGATCACAGTTCCGCTGCAGATGGTTGAATTCTACTTCATCCTCGCTGCTGTGATGGCGGTCAGCGCCGGCATATTCTGGCGGCTTTTGATTGGGTCGCTCGTGATGTTAGGGGCAGGATACGCTGGTGAAGCCGGCTTAATAAACGCCTGGGTAGGCTTTGTTGTAGGTTTGGCAGGATGGGCATACATTTTGTACGAAATCTTTGCTGGCGAGGCAGGCAAAGCGTCTGCCGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTTACGGTT LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWVGFVVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTGCAGATGGTTGAATTCTACTTCATCCTCGCTGCT---------GTG---ATGGCGGTCAGCGCC---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTCGTGATGTTAGGGGCAGGATACGCTGGTGAA---------GCC------------------GGC------TTA---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGTAGGC---TTTGTTGTAGGTTTGGCAGGATGGGCATACATTTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAAGCGTCTGCCGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTTACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WVG-FVVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926694 [IV-Proteo4-d] PRGD_OTU002a_d4d94f29f6a1509c9ddd4352f9763a04 gb|KJ926694| PRGD_OTU002a_d4d94f29f6a1509c9ddd4352f9763a04, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_d4d94f29f6a1509c9ddd4352f9763a04, putative proteorhodopsin gene, partial cds. KJ926694 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTCATCCTCGCTGCTGTGATGGCGGTCAGCGCCGGCATATTCTGGCGGCTTTTGATTGGGTCGCTCGTGATGTTAGGGGCAGGATACGCTGGTGAAGCCGGCTTAATAAACGCCTGGGTAGGCTTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATCTTTGCTGGCGAGGCAGGCAAAGCGTCTGCCGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTTACGGTT LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWVGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTCATCCTCGCTGCT---------GTG---ATGGCGGTCAGCGCC---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTCGTGATGTTAGGGGCAGGATACGCTGGTGAA---------GCC------------------GGC------TTA---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGTAGGC---TTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAAGCGTCTGCCGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTTACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WVG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926696 [IV-Proteo4-d] PRGD_OTU002a_d834f17adc2a082ae388f391af9ac70d gb|KJ926696| PRGD_OTU002a_d834f17adc2a082ae388f391af9ac70d, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_d834f17adc2a082ae388f391af9ac70d, putative proteorhodopsin gene, partial cds. KJ926696 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTGATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTCATCCTCGCTGCTGTGATGGCGGTCAGCGCCGGCATATTCTGGCGGCTTTTGATTGGGTCGCTCGTGATGTTAGGGGCAGGATACGCTGGTGAAGCCGGCTTAATAAACGCCTGGGTAGGCTTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATCTTTGCTGGCGAGGCAGGCAAAGCGTCTGCCGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTT LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWVGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTCATCCTCGCTGCT---------GTG---ATGGCGGTCAGCGCC---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTCGTGATGTTAGGGGCAGGATACGCTGGTGAA---------GCC------------------GGC------TTA---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGTAGGC---TTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAAGCGTCTGCCGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WVG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIV---------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926623 [IV-Proteo4-d] PRGD_OTU002a_4a0d79a4e42e8239c70684f54a2b6dfe gb|KJ926623| PRGD_OTU002a_4a0d79a4e42e8239c70684f54a2b6dfe, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_4a0d79a4e42e8239c70684f54a2b6dfe, putative proteorhodopsin gene, partial cds. KJ926623 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (70.9139, -128.9264), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATCACTGTGCCGCTGCAGATGGTTGAATTCTATTTCATCCTAGCAGCAGTTACCGCCGTCAGCGCGGGTATCTTCTGGCGGCTTCTCATCGGATCGCTTGTTATGTTAGTGGCCGGCTACGCTGGTGAAGCCGGCTTAATAAACGCCTGGGCAGGCTTCATTGTAGGTTTGGCAGGATGGGCATACATTTTGTACGAAATCTTTGCTGGCGAGGCAGGCAAAGCTTCTGCGGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTTACCGTC LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCGCTGCAGATGGTTGAATTCTATTTCATCCTAGCAGCA---------GTT---ACCGCCGTCAGCGCG---GGTATC------------------------------------TTCTGGCGG---CTTCTCATCGGATCGCTTGTTATGTTAGTGGCCGGCTACGCTGGTGAA---------GCC------------------GGC------TTA---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCAGGC---TTCATTGTAGGTTTGGCAGGATGGGCATACATTTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAAGCTTCTGCGGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTTACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926661 [IV-Proteo4-d] PRGD_OTU002a_9cdfc381025ca090b315b8869e71cfad gb|KJ926661| PRGD_OTU002a_9cdfc381025ca090b315b8869e71cfad, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_9cdfc381025ca090b315b8869e71cfad, putative proteorhodopsin gene, partial cds. KJ926661 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTGATCACTGTGCCGCTGCAGATGGTTGAATTCTATTTCATCCTAGCAGCAGTTACCGCCGTCAGCGCGGGTATCTTCTGGCGGCTTCTCATCGGATCGCTTGTTATGTTAGTGGCTGGCTACGCTGGTGAAGCGGGCTTAATAAACGCCTGGGCAGGCTTCATTGTAGGTTTGGCAGGATGGGCATACATTTTGTACGAAATCTTTGCTGGCGAGGCAGGCAAAGCTTCTGCCGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTTACGGTC LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCGCTGCAGATGGTTGAATTCTATTTCATCCTAGCAGCA---------GTT---ACCGCCGTCAGCGCG---GGTATC------------------------------------TTCTGGCGG---CTTCTCATCGGATCGCTTGTTATGTTAGTGGCTGGCTACGCTGGTGAA---------GCG------------------GGC------TTA---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCAGGC---TTCATTGTAGGTTTGGCAGGATGGGCATACATTTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAAGCTTCTGCCGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTTACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926627 [IV-Proteo4-d] PRGD_OTU002a_559fd5c2c64da6ee30ab3fb102d11389 gb|KJ926627| PRGD_OTU002a_559fd5c2c64da6ee30ab3fb102d11389, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_559fd5c2c64da6ee30ab3fb102d11389, putative proteorhodopsin gene, partial cds. KJ926627 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) TTGATCACTGTGCCGCTGCAGATGGTTGAATTCTATTTCATCCTAGCAGCAGTTACCGCCGTCAGCGCGGGTATCTTCTGGCGGCTTCTCATCGGATCGCTTGTGATGTTAGTGGCCGGCTACGCTGGTGAAGCCGGGTTAATAAACGCCTGGGCAGGCTTCATTGTAGGTTTGGCAGGATGGGCATACATTTTGTACGAAATCTTTGCTGGCGAGGCAGGCAAAGCTTCTGCTGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTTACGGTC LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCGCTGCAGATGGTTGAATTCTATTTCATCCTAGCAGCA---------GTT---ACCGCCGTCAGCGCG---GGTATC------------------------------------TTCTGGCGG---CTTCTCATCGGATCGCTTGTGATGTTAGTGGCCGGCTACGCTGGTGAA---------GCC------------------GGG------TTA---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCAGGC---TTCATTGTAGGTTTGGCAGGATGGGCATACATTTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAAGCTTCTGCTGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTTACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926588 [IV-Proteo4-d] PRGD_OTU002a_08ead21ed2710c08613d621094f0584c gb|KJ926588| PRGD_OTU002a_08ead21ed2710c08613d621094f0584c, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_08ead21ed2710c08613d621094f0584c, putative proteorhodopsin gene, partial cds. KJ926588 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATCACAGTTCCGCTGCAGATGGTTGAATTCTACTTTATCCTCGCTGCTGTTATGGCGGTCAGCGCTGGTATATTCTGGCGGCTTTTGATTGGGTCGCTCGTGATGCTAGGGGCAGGTTACGCTGGTGAAGCCGGCTTAATAAACGCCTGGGCAGGCTTCATTGTAGGTTTGGCCGGATGGGCATACATCTTGTACGAAATCTTTGCTGGCGAGGCAGGCAAAGCTTCTGCCGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTTACGGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTGCAGATGGTTGAATTCTACTTTATCCTCGCTGCT---------GTT---ATGGCGGTCAGCGCT---GGTATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTCGTGATGCTAGGGGCAGGTTACGCTGGTGAA---------GCC------------------GGC------TTA---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCAGGC---TTCATTGTAGGTTTGGCCGGATGGGCATACATCTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAAGCTTCTGCCGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTTACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926605 [IV-Proteo4-d] PRGD_OTU002a_272881e9466883f9586800db63ba9fab gb|KJ926605| PRGD_OTU002a_272881e9466883f9586800db63ba9fab, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_272881e9466883f9586800db63ba9fab, putative proteorhodopsin gene, partial cds. KJ926605 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTGATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCTGTTATGGCGGTCAGCGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTCGTGATGTTAGGGGCAGGTTACGCTGGTGAAGCCGGCTTAATAAACGCCTGGGCAGGCTTCATTGTAGGTTTGGCAGGATGGGCATACATCTTGTATGAAATCTTTGCTGGCGAGGCAGGCAAAGCTTCTGCCGAAAAGGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTTACGGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCT---------GTT---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTCGTGATGTTAGGGGCAGGTTACGCTGGTGAA---------GCC------------------GGC------TTA---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCAGGC---TTCATTGTAGGTTTGGCAGGATGGGCATACATCTTGTATGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAAGCTTCTGCCGAA------AAG---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTTACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926611 [IV-Proteo4-d] PRGD_OTU002a_3a67a0e4cbaea84050f0f69b0b076948 gb|KJ926611| PRGD_OTU002a_3a67a0e4cbaea84050f0f69b0b076948, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_3a67a0e4cbaea84050f0f69b0b076948, putative proteorhodopsin gene, partial cds. KJ926611 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACAGTTCCGCTGCAAATGGTCGAATTCTACTTTATCCTCGCTGCTGTTATGGCGGTCAGCGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTCGTGATGCTAGGGGCAGGTTACGCTGGTGAAGCTGGCTTAATAAACGCCTGGGCAGGCTTTATTGTGGGTTTGGCAGGATGGGCATACATCTTGTACGAAATCTTTGCTGGCGAGGCAGGCAAAGCCTCTGCCGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTTACGGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTGCAAATGGTCGAATTCTACTTTATCCTCGCTGCT---------GTT---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTCGTGATGCTAGGGGCAGGTTACGCTGGTGAA---------GCT------------------GGC------TTA---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCAGGC---TTTATTGTGGGTTTGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAAGCCTCTGCCGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTTACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926644 [IV-Proteo4-d] PRGD_OTU002a_7bd7b4bc99816e6b94ef9da8a93c37f3 gb|KJ926644| PRGD_OTU002a_7bd7b4bc99816e6b94ef9da8a93c37f3, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_7bd7b4bc99816e6b94ef9da8a93c37f3, putative proteorhodopsin gene, partial cds. KJ926644 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCTGTTATGGCGGTCAGCGCTGGCATATTCTGGCGGCTTCTGATTGGGTCGCTCGTGATGCTAGGGGCAGGTTACGCTGGTGAAGCCGGCCTAATTAACGCCTGGGCAGGCTTTATTGTGGGTTTGGCAGGATGGGCATACATCTTGTACGAAATCTTTGCTGGCGAGGCAGGCAAAGCTTCTGCCGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTTACGGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCT---------GTT---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTCTGATTGGGTCGCTCGTGATGCTAGGGGCAGGTTACGCTGGTGAA---------GCC------------------GGC------CTA---------------------------------ATT------------------------------------------------------------------AACGCC------------------TGGGCAGGC---TTTATTGTGGGTTTGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAAGCTTCTGCCGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTTACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926600 [IV-Proteo4-d] PRGD_OTU002a_16ee6e4fde48fd6f09bfb82336ad6b15 gb|KJ926600| PRGD_OTU002a_16ee6e4fde48fd6f09bfb82336ad6b15, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_16ee6e4fde48fd6f09bfb82336ad6b15, putative proteorhodopsin gene, partial cds. KJ926600 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCTGTCATGGCGGTCAGCGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTTGTGATGTTAGGAGCAGGGTACGCTGGTGAAGCTGGCTTAATAAACGCCTGGGCAGGCTTTATTGTTGGTTTGGCAGGATGGGCGTACATCTTGTACGAAATCTTTGCTGGCGAGGCAGGCAAAGCTTCTGCCGAAAAAGCCCCAGCATCGGTGCAGAGTGCCTTTGGGACAATGCGTTTAATCGTTACGGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCT---------GTC---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTTGTGATGTTAGGAGCAGGGTACGCTGGTGAA---------GCT------------------GGC------TTA---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCAGGC---TTTATTGTTGGTTTGGCAGGATGGGCGTACATCTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAAGCTTCTGCCGAA------AAA---GCCCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACAATG---CGTTTAATCGTTACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926670 [IV-Proteo4-d] PRGD_OTU002a_a97e30fff74026fd60cf626ee138e89a gb|KJ926670| PRGD_OTU002a_a97e30fff74026fd60cf626ee138e89a, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_a97e30fff74026fd60cf626ee138e89a, putative proteorhodopsin gene, partial cds. KJ926670 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), English Channel (48.7717, -3.9683) TTGATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCTGTTATGACGGTCAGCGCTGGCATATTCTGGCGACTTTTGATTGGGTCTCTGGTGATGTTAGGGGCAGGTTACGCTGGTGAAGCTGGCTTGATAAACGCCTGGGCAGGCTTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATCTTTGCTGGCGAGGCAGGCAAAGCTTCTGCCGAAAAAGCTCCAGCAGCGGTGCAGAGTGCCTTTGGAACAATGCGTTTAATTGTTACGGTC LITVPLQMVEFYFILAAVMTVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPAAVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTGCAGATGGTCGAATTCTACTTTATCCTCGCTGCT---------GTT---ATGACGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGA---CTTTTGATTGGGTCTCTGGTGATGTTAGGGGCAGGTTACGCTGGTGAA---------GCT------------------GGC------TTG---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCAGGC---TTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAAGCTTCTGCCGAA------AAA---GCTCCAGCAGCGGTG---CAG---AGT---GCC---TTT---GGA---ACAATG---CGTTTAATTGTTACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MTVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APAAV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926624 [IV-Proteo4-d] PRGD_OTU002a_4a58eedf9570644992062abbed3e9aa4 gb|KJ926624| PRGD_OTU002a_4a58eedf9570644992062abbed3e9aa4, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_4a58eedf9570644992062abbed3e9aa4, putative proteorhodopsin gene, partial cds. KJ926624 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACCGTTCCGCTTCAGATGGTTGAATTCTACTTTATTCTTGCTGCTGTCATGGCGGTCAGCGCTGGCATATTCTGGCGGCTTTTGATCGGGTCGCTCGTGATGTTGGGAGCAGGTTACGCTGGTGAAGCCGGTTTGATAAACGCCTGGGCTGGTTTCATTGTCGGTTTGGCAGGATGGGCATATATCTTGTATGAAATCTTTGCTGGCGAAGCAGGAAAAGCTTCTGCCGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGAACCATGCGATTGATTGTAACGGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTTCCGCTTCAGATGGTTGAATTCTACTTTATTCTTGCTGCT---------GTC---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATCGGGTCGCTCGTGATGTTGGGAGCAGGTTACGCTGGTGAA---------GCC------------------GGT------TTG---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCTGGT---TTCATTGTCGGTTTGGCAGGATGGGCATATATCTTGTATGAAATC---------------TTT------GCT---GGCGAAGCAGGAAAAGCTTCTGCCGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGA---ACCATG---CGATTGATTGTAACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926673 [IV-Proteo4-d] PRGD_OTU002a_b2d5f8a8813f9ee28fb5d5f84f3aa419 gb|KJ926673| PRGD_OTU002a_b2d5f8a8813f9ee28fb5d5f84f3aa419, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_b2d5f8a8813f9ee28fb5d5f84f3aa419, putative proteorhodopsin gene, partial cds. KJ926673 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTGATCACCGTTCCGCTTCAGATGGTTGAATTCTACTTTATTCTTGCTGCTGTCATGGCGGTCAGCGCTGGCATTTTCTGGCGGCTTTTAATCGGGTCGCTCGTGATGTTGGGAGCAGGTTACGCTGGTGAAGCCGGTTTGATAAACGCCTGGGCTGGTTTCATTGTCGGTTTGGCAGGATGGGCATATATCTTGTACGAAATCTTTGCTGGCGAAGCAGGAAAAGCTTCTGCCGAAAAAGCTCCAGCATCTGTGCAGAGTGCCTTTGGAACCATGCGATTGATTGTAACGGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTTCCGCTTCAGATGGTTGAATTCTACTTTATTCTTGCTGCT---------GTC---ATGGCGGTCAGCGCT---GGCATT------------------------------------TTCTGGCGG---CTTTTAATCGGGTCGCTCGTGATGTTGGGAGCAGGTTACGCTGGTGAA---------GCC------------------GGT------TTG---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCTGGT---TTCATTGTCGGTTTGGCAGGATGGGCATATATCTTGTACGAAATC---------------TTT------GCT---GGCGAAGCAGGAAAAGCTTCTGCCGAA------AAA---GCTCCAGCATCTGTG---CAG---AGT---GCC---TTT---GGA---ACCATG---CGATTGATTGTAACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926697 [IV-Proteo4-d] PRGD_OTU002a_dee0fbdd608b1852b712ee04bf513d31 gb|KJ926697| PRGD_OTU002a_dee0fbdd608b1852b712ee04bf513d31, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_dee0fbdd608b1852b712ee04bf513d31, putative proteorhodopsin gene, partial cds. KJ926697 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTGATCACCGTTCCGCTTCAGATGGTTGAATTCTACTTTATTCTTGCTGCTGTCATGGCGGTCAGCGCTGGCATATTCTGGCGGCTTTTGATCGGGTCGCTCGTGATGTTGGGAGCAGGTTACGCTGGTGAAGCCGGTTTGATAAACGCCTGGGCTGGTTTCATTGTCGGTTTGGCAGGATGGGCATATATTTTGTACGAAATCTTTGCTGGCGAAGCAGGAAAAGCTTCTGCCGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGAACCATGCGATTGATTGTAACGGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTTCCGCTTCAGATGGTTGAATTCTACTTTATTCTTGCTGCT---------GTC---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATCGGGTCGCTCGTGATGTTGGGAGCAGGTTACGCTGGTGAA---------GCC------------------GGT------TTG---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCTGGT---TTCATTGTCGGTTTGGCAGGATGGGCATATATTTTGTACGAAATC---------------TTT------GCT---GGCGAAGCAGGAAAAGCTTCTGCCGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGA---ACCATG---CGATTGATTGTAACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926706 [IV-Proteo4-d] PRGD_OTU002a_ebd4ede97e44e50338415004200359a5 gb|KJ926706| PRGD_OTU002a_ebd4ede97e44e50338415004200359a5, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_ebd4ede97e44e50338415004200359a5, putative proteorhodopsin gene, partial cds. KJ926706 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTGATCACCGTTCCGCTTCAGATGGTTGAGTTCTACTTTATTCTCGCCGCTGTCATGGCGGTCAGCGCTGGCATATTCTGGCGGCTTTTGATCGGGTCGCTCGTGATGTTGGGCGCAGGTTACGCTGGTGAAGCCGGTTTGATAAACGCCTGGGCTGGTTTCATTGTCGGTTTGGCAGGATGGGCATATATCTTGTACGAAATCTTTGCTGGCGAAGCAGGAAAAGCTTCTGCCGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGAACCATGCGATTAATTGTAACGGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTTCCGCTTCAGATGGTTGAGTTCTACTTTATTCTCGCCGCT---------GTC---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATCGGGTCGCTCGTGATGTTGGGCGCAGGTTACGCTGGTGAA---------GCC------------------GGT------TTG---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCTGGT---TTCATTGTCGGTTTGGCAGGATGGGCATATATCTTGTACGAAATC---------------TTT------GCT---GGCGAAGCAGGAAAAGCTTCTGCCGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGA---ACCATG---CGATTAATTGTAACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926692 [IV-Proteo4-d] PRGD_OTU002a_d22217658c8c70d24d954d921cbe9dfd gb|KJ926692| PRGD_OTU002a_d22217658c8c70d24d954d921cbe9dfd, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_d22217658c8c70d24d954d921cbe9dfd, putative proteorhodopsin gene, partial cds. KJ926692 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACCGTTCCGCTTCAGATGGTTGAATTCTACTTTATTCTCGCTGCTGTCATGGCGGTCAGCGCTGGCATATTCTGGCGGCTTTTGATCGGGTCGCTCGTGATGTTGGGAGCAGGTTATGCTGGTGAAGCCGGTTTGATAAACGCTTGGGCTGGTTTCATTGTCGGTTTGGCCGGATGGGCATACATCTTGTACGAAATCTTTGCTGGCGAAGCAGGTAAAGCTTCTGCCGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGAACCATGCGATTAATTGTAACGGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTTCCGCTTCAGATGGTTGAATTCTACTTTATTCTCGCTGCT---------GTC---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATCGGGTCGCTCGTGATGTTGGGAGCAGGTTATGCTGGTGAA---------GCC------------------GGT------TTG---------------------------------ATA------------------------------------------------------------------AACGCT------------------TGGGCTGGT---TTCATTGTCGGTTTGGCCGGATGGGCATACATCTTGTACGAAATC---------------TTT------GCT---GGCGAAGCAGGTAAAGCTTCTGCCGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGA---ACCATG---CGATTAATTGTAACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926614 [IV-Proteo4-d] PRGD_OTU002a_3b0d6295f894b29b5cb36f97d5c28e01 gb|KJ926614| PRGD_OTU002a_3b0d6295f894b29b5cb36f97d5c28e01, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_3b0d6295f894b29b5cb36f97d5c28e01, putative proteorhodopsin gene, partial cds. KJ926614 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) TTGATAACCGTTCCACTCCAGATGGTTGAATTCTACTTTATTCTCGCTGCTGTTATGGCGGTCAGCGCTGGCATATTCTGGCGACTTTTGATCGGGTCGCTCGTAATGTTGGGAGCAGGTTACGCCGGTGAAGCTGGTTTGATAAACGCTTGGGCTGGTTTCATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATCTTTGCTGGCGAGGCAGGCAAAGCTTCTGCCGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTAACGGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACCGTTCCACTCCAGATGGTTGAATTCTACTTTATTCTCGCTGCT---------GTT---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGA---CTTTTGATCGGGTCGCTCGTAATGTTGGGAGCAGGTTACGCCGGTGAA---------GCT------------------GGT------TTG---------------------------------ATA------------------------------------------------------------------AACGCT------------------TGGGCTGGT---TTCATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAAGCTTCTGCCGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTAACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926680 [IV-Proteo4-d] PRGD_OTU002a_beee27271433eb088a57eff1d86d8593 gb|KJ926680| PRGD_OTU002a_beee27271433eb088a57eff1d86d8593, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_beee27271433eb088a57eff1d86d8593, putative proteorhodopsin gene, partial cds. KJ926680 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATCACCGTTCCACTTCAGATGGTTGAATTCTACTTCATTCTCGCTGCTGTAATGGCGGTCAGCGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTCGTGATGTTGGGAGCAGGTTACGCTGGTGAAGCTGGTTTGATCAACGCTTGGGCTGGTTTCATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATCTTTGCTGGCGAGGCAGGCAAAGCTTCTGCCGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTCGGGACCATGCGATTAATTGTAACGGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTTCCACTTCAGATGGTTGAATTCTACTTCATTCTCGCTGCT---------GTA---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTCGTGATGTTGGGAGCAGGTTACGCTGGTGAA---------GCT------------------GGT------TTG---------------------------------ATC------------------------------------------------------------------AACGCT------------------TGGGCTGGT---TTCATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAAGCTTCTGCCGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTC---GGG---ACCATG---CGATTAATTGTAACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926602 [IV-Proteo4-d] PRGD_OTU002a_242ad2618a7a0c1be4a8d930bea1347a gb|KJ926602| PRGD_OTU002a_242ad2618a7a0c1be4a8d930bea1347a, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_242ad2618a7a0c1be4a8d930bea1347a, putative proteorhodopsin gene, partial cds. KJ926602 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACCGTTCCACTTCAGATGGTCGAGTTCTACTTTATTCTCGCTGCTGTCATGGCGGTCAGCGCTGGCATATTCTGGCGGCTTCTGATTGGGTCGCTAGTGATGTTGGGAGCAGGTTACGCTGGTGAAGCGGGTTTGATAAATGCCTGGGCCGGTTTCATTGTAGGTCTGGCAGGATGGGCATACATCTTGTATGAAATCTTCGCTGGCGAGGCGGGCAAAGCGTCTGCCGAAAAAGCTCCAGCGTCGGTGCAGAGTGCCTTTGGAACCATGCGATTAATTGTAACGGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTTCCACTTCAGATGGTCGAGTTCTACTTTATTCTCGCTGCT---------GTC---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTCTGATTGGGTCGCTAGTGATGTTGGGAGCAGGTTACGCTGGTGAA---------GCG------------------GGT------TTG---------------------------------ATA------------------------------------------------------------------AATGCC------------------TGGGCCGGT---TTCATTGTAGGTCTGGCAGGATGGGCATACATCTTGTATGAAATC---------------TTC------GCT---GGCGAGGCGGGCAAAGCGTCTGCCGAA------AAA---GCTCCAGCGTCGGTG---CAG---AGT---GCC---TTT---GGA---ACCATG---CGATTAATTGTAACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926609 [IV-Proteo4-d] PRGD_OTU002a_377e2ddedea30a2f672717b3fdfc8844 gb|KJ926609| PRGD_OTU002a_377e2ddedea30a2f672717b3fdfc8844, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_377e2ddedea30a2f672717b3fdfc8844, putative proteorhodopsin gene, partial cds. KJ926609 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-33.28, 45.35) TTGATCACCGTTCCACTTCAGATGGTTGAGTTCTACTTTATCCTCGCTGCTGTCATGGCAGTCAGCGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTCGTGATGTTAGGAGCAGGTTACGCCGGTGAAGCCGGTTTGATAAACGCCTGGGCTGGTTTCATTGTAGGTTTGGCAGGATGGGCATACATTTTGTACGAAATCTTTGCTGGCGAGGCAGGCAAAGCGTCTGCCGAAAAAGCTCCAGCATCGGTTCAGAGTGCCTTTGGAACCATGCGATTAATTGTAACGGTC LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTTCCACTTCAGATGGTTGAGTTCTACTTTATCCTCGCTGCT---------GTC---ATGGCAGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTCGTGATGTTAGGAGCAGGTTACGCCGGTGAA---------GCC------------------GGT------TTG---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCTGGT---TTCATTGTAGGTTTGGCAGGATGGGCATACATTTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAAGCGTCTGCCGAA------AAA---GCTCCAGCATCGGTT---CAG---AGT---GCC---TTT---GGA---ACCATG---CGATTAATTGTAACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926693 [IV-Proteo4-d] PRGD_OTU002a_d4021b5a46729b851fa368d33a828927 gb|KJ926693| PRGD_OTU002a_d4021b5a46729b851fa368d33a828927, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_d4021b5a46729b851fa368d33a828927, putative proteorhodopsin gene, partial cds. KJ926693 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTGATCACCGTTCCACTGCAGATGGTCGAATTCTACTTTATTCTCGCTGCTGTTATGGCGGTCAGCGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTCGTGATGTTAGGGGCGGGCTATGCTGGTGAAGCCGGCTTGATAAACGCTTGGGCTGGCTTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATCTTTGCTGGCGAGGCAGGCAAAGCTTCTGCCGAAAAAGCTCCAGCATCAGTTCAGAGTGCCTTTGGGACCATGCGATTAATTGTAACGGTT LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTTCCACTGCAGATGGTCGAATTCTACTTTATTCTCGCTGCT---------GTT---ATGGCGGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTCGTGATGTTAGGGGCGGGCTATGCTGGTGAA---------GCC------------------GGC------TTG---------------------------------ATA------------------------------------------------------------------AACGCT------------------TGGGCTGGC---TTTATTGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTT------GCT---GGCGAGGCAGGCAAAGCTTCTGCCGAA------AAA---GCTCCAGCATCAGTT---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTAACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926603 [IV-Proteo4-d] PRGD_OTU002a_2451cad2eb4af09428e43e45fe6af1de gb|KJ926603| PRGD_OTU002a_2451cad2eb4af09428e43e45fe6af1de, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_2451cad2eb4af09428e43e45fe6af1de, putative proteorhodopsin gene, partial cds. KJ926603 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Mediterranean Sea (33.762, 29.175), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTGATCACAGTTCCGCTGCAAATGGTCGAATTCTACTTTATCCTCGCTGCTGTTATGGCAGTCAGCGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTTGTGATGTTAGGGGCAGGTTATGCTGGTGAAGCTGGCTTAATTAATGCCTGGGCTGGCTTTATAGTAGGTTTGGCAGGATGGGCATACATTCTTTACGAAATCTTTGCTGGCGAGGCGGGCAAAGCTTCTGCAGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTAACGGTT LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTTCCGCTGCAAATGGTCGAATTCTACTTTATCCTCGCTGCT---------GTT---ATGGCAGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTTGTGATGTTAGGGGCAGGTTATGCTGGTGAA---------GCT------------------GGC------TTA---------------------------------ATT------------------------------------------------------------------AATGCC------------------TGGGCTGGC---TTTATAGTAGGTTTGGCAGGATGGGCATACATTCTTTACGAAATC---------------TTT------GCT---GGCGAGGCGGGCAAAGCTTCTGCAGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTAACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926622 [IV-Proteo4-d] PRGD_OTU002a_45f5fbbbbb636dd21428c0bbb40d3c43 gb|KJ926622| PRGD_OTU002a_45f5fbbbbb636dd21428c0bbb40d3c43, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_45f5fbbbbb636dd21428c0bbb40d3c43, putative proteorhodopsin gene, partial cds. KJ926622 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATCACAGTTCCGCTGCAAATGGTCGAATTCTACTTTATCCTCGCTGCTGTTATGGCAGTCAGCGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTTGTAATGTTAGGGGCAGGTTATGCTGGTGAAGCTGGCTTAATTAACGCTTGGGCTGGCTTTATAGTAGGTTTGGCAGGATGGGCATACATTCTGTACGAAATCTTTGCTGGCGAGGCGGGCAAAGCTTCTGCAGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATTGTAACGGTT LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTTCCGCTGCAAATGGTCGAATTCTACTTTATCCTCGCTGCT---------GTT---ATGGCAGTCAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTTGTAATGTTAGGGGCAGGTTATGCTGGTGAA---------GCT------------------GGC------TTA---------------------------------ATT------------------------------------------------------------------AACGCT------------------TGGGCTGGC---TTTATAGTAGGTTTGGCAGGATGGGCATACATTCTGTACGAAATC---------------TTT------GCT---GGCGAGGCGGGCAAAGCTTCTGCAGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTAACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926684 [IV-Proteo4-d] PRGD_OTU002a_c6c869a04bc3a6e768968f17abe1e886 gb|KJ926684| PRGD_OTU002a_c6c869a04bc3a6e768968f17abe1e886, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_c6c869a04bc3a6e768968f17abe1e886, putative proteorhodopsin gene, partial cds. KJ926684 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) CTGATCACAGTTCCGCTGCAAATGGTCGAATTCTACTTTATCCTCGCTGCTGTTATGGCAGTTAGCGCTGGCATATTCTGGCGGCTTTTGATTGGGTCGCTTGTGATGTTAGGGGCAGGTTATGCTGGTGAAGCTGGCTTAATTAACGCCTGGGCTGGCTTTATAGTAGGTTTGGCAGGATGGGCATACATTTTGTACGAAATCTTTGCTGGCGAGGCGGGCAAAGCTTCTGCAGAGAAAGCTCCAGCATCGGTGCAAAGTGCCTTTGGGACCATGCGATTAATTGTAACGGTT LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTTCCGCTGCAAATGGTCGAATTCTACTTTATCCTCGCTGCT---------GTT---ATGGCAGTTAGCGCT---GGCATA------------------------------------TTCTGGCGG---CTTTTGATTGGGTCGCTTGTGATGTTAGGGGCAGGTTATGCTGGTGAA---------GCT------------------GGC------TTA---------------------------------ATT------------------------------------------------------------------AACGCC------------------TGGGCTGGC---TTTATAGTAGGTTTGGCAGGATGGGCATACATTTTGTACGAAATC---------------TTT------GCT---GGCGAGGCGGGCAAAGCTTCTGCAGAG------AAA---GCTCCAGCATCGGTG---CAA---AGT---GCC---TTT---GGG---ACCATG---CGATTAATTGTAACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926655 [IV-Proteo4-d] PRGD_OTU002a_8ddc00f7b267d0d5781697c892a3a200 gb|KJ926655| PRGD_OTU002a_8ddc00f7b267d0d5781697c892a3a200, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_8ddc00f7b267d0d5781697c892a3a200, putative proteorhodopsin gene, partial cds. KJ926655 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) TTGATTACAGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTTGCTGCTGTTACGGCAGTCAGTGCCGGCATATTCTGGCGACTCTTGATCGGTTCGCTCGTTATGTTAGTAGCAGGTTATGCAGGTGAAGCTGGTTTGATAAACGCTTGGGCAGGCTTTATTGTAGGAATGGCCGGCTGGGCATACATCCTGTATGAGATCTTCGCTGGCGAGGCGGGTAAAGCTTCTGCTGAGAAAGCTCCAGCATCTGTGCAGAGTGCCTTTGGAACGATGCGGTTAATCGTGACTGTG LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGMAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACAGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTTGCTGCT---------GTT---ACGGCAGTCAGTGCC---GGCATA------------------------------------TTCTGGCGA---CTCTTGATCGGTTCGCTCGTTATGTTAGTAGCAGGTTATGCAGGTGAA---------GCT------------------GGT------TTG---------------------------------ATA------------------------------------------------------------------AACGCT------------------TGGGCAGGC---TTTATTGTAGGAATGGCCGGCTGGGCATACATCCTGTATGAGATC---------------TTC------GCT---GGCGAGGCGGGTAAAGCTTCTGCTGAG------AAA---GCTCCAGCATCTGTG---CAG---AGT---GCC---TTT---GGA---ACGATG---CGGTTAATCGTGACTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926657 [IV-Proteo4-d] PRGD_OTU002a_91038995bf146f99de28d6f899f96fb4 gb|KJ926657| PRGD_OTU002a_91038995bf146f99de28d6f899f96fb4, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_91038995bf146f99de28d6f899f96fb4, putative proteorhodopsin gene, partial cds. KJ926657 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) TTGATTACAGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTTGCTGCTGTTACGGCCGTCAGTGCTGGCATATTCTGGCGACTCTTGATCGGTTCGCTCGTTATGTTAGTGGCAGGTTATGCCGGTGAAGCTGGTCTGATAAACGCCTGGGCGGGCTTTATTGTAGGAATGGCCGGCTGGGCATACATCCTGTATGAGATCTTCGCTGGCGAGGCAGGTAAAGCTTCTGCTGAGAAAGCTCCAGCATCTGTACAGAGCGCCTTTGGAACGATGCGTTTAATCGTGACTGTA LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGMAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACAGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTTGCTGCT---------GTT---ACGGCCGTCAGTGCT---GGCATA------------------------------------TTCTGGCGA---CTCTTGATCGGTTCGCTCGTTATGTTAGTGGCAGGTTATGCCGGTGAA---------GCT------------------GGT------CTG---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCGGGC---TTTATTGTAGGAATGGCCGGCTGGGCATACATCCTGTATGAGATC---------------TTC------GCT---GGCGAGGCAGGTAAAGCTTCTGCTGAG------AAA---GCTCCAGCATCTGTA---CAG---AGC---GCC---TTT---GGA---ACGATG---CGTTTAATCGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926636 [IV-Proteo4-d] PRGD_OTU002a_69ccc3f2368b483077e2411febdd43eb gb|KJ926636| PRGD_OTU002a_69ccc3f2368b483077e2411febdd43eb, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_69ccc3f2368b483077e2411febdd43eb, putative proteorhodopsin gene, partial cds. KJ926636 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATTACAGTTCCGCTGCAAATGGTTGAATTCTACTTCATCCTTGCTGCTGTTACCGCTGTCAGTGCTGGGATATTCTGGCGACTCCTGATCGGTTCGCTCGTTATGTTAGTGGCGGGTTATGCAGGTGAAGCTGGTTTAATAAACGCCTGGGCGGGCTTTATTGTAGGAATGGCCGGCTGGGCATACATCCTGTATGAGATATTTGCTGGCGAGGCGGGTAAAGCTTCTGCTGAGAAAGCTCCAGCATCTGTGCAGAGTGCCTTTGGAACGATGCGGTTAATCGTGACTGTA LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGMAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACAGTTCCGCTGCAAATGGTTGAATTCTACTTCATCCTTGCTGCT---------GTT---ACCGCTGTCAGTGCT---GGGATA------------------------------------TTCTGGCGA---CTCCTGATCGGTTCGCTCGTTATGTTAGTGGCGGGTTATGCAGGTGAA---------GCT------------------GGT------TTA---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCGGGC---TTTATTGTAGGAATGGCCGGCTGGGCATACATCCTGTATGAGATA---------------TTT------GCT---GGCGAGGCGGGTAAAGCTTCTGCTGAG------AAA---GCTCCAGCATCTGTG---CAG---AGT---GCC---TTT---GGA---ACGATG---CGGTTAATCGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926713 [IV-Proteo4-d] PRGD_OTU002a_f830d4073e3e9397033aa19ae06f8b20 gb|KJ926713| PRGD_OTU002a_f830d4073e3e9397033aa19ae06f8b20, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_f830d4073e3e9397033aa19ae06f8b20, putative proteorhodopsin gene, partial cds. KJ926713 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) TTGATTACAGTTCCGCTACAAATGGTTGAATTCTACTTCATCCTTGCTGCTGTTACGGCCGTCAGTGCTGGCATATTCTGGCGACTCTTGATCGGTTCGCTCGTTATGTTAGTGGCAGGTTATGCAGGTGAAGCTGGTCTGATAAACGCCTGGGCGGGCTTTATTGTAGGAATGGCTGGCTGGGCATACATCCTGTATGAGATCTTCGCTGGCGAGGCGGGTAAAGCTTCTGCTGAGAAAGCTCCAGCATCTGTGCAGAGTGCCTTTGGAACGATGCGGTTAATCGTGACTGTA LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGMAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACAGTTCCGCTACAAATGGTTGAATTCTACTTCATCCTTGCTGCT---------GTT---ACGGCCGTCAGTGCT---GGCATA------------------------------------TTCTGGCGA---CTCTTGATCGGTTCGCTCGTTATGTTAGTGGCAGGTTATGCAGGTGAA---------GCT------------------GGT------CTG---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCGGGC---TTTATTGTAGGAATGGCTGGCTGGGCATACATCCTGTATGAGATC---------------TTC------GCT---GGCGAGGCGGGTAAAGCTTCTGCTGAG------AAA---GCTCCAGCATCTGTG---CAG---AGT---GCC---TTT---GGA---ACGATG---CGGTTAATCGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926665 [IV-Proteo4-d] PRGD_OTU002a_a2338cd038d8cc6a8251ca511ed7a944 gb|KJ926665| PRGD_OTU002a_a2338cd038d8cc6a8251ca511ed7a944, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_a2338cd038d8cc6a8251ca511ed7a944, putative proteorhodopsin gene, partial cds. KJ926665 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATTACAGTTCCGTTGCAAATGGTTGAATTCTACTTCATCCTTGCTGCTGTTACGGCCGTCAGTGCTGGCATATTCTGGCGACTCTTGATCGGCTCGCTCGTTATGCTAGTGGCAGGTTATGCAGGTGAAGCTGGTCTGATAAACGCCTGGGCGGGCTTTATTGTAGGAATGGCTGGCTGGGCATATATCCTGTATGAGATCTTCGCTGGCGAGGCGGGTAAAGCTTCTGCTGAGAAAGCTCCAGCATCTGTGCAGAGTGCCTTTGGAACGATGCGGTTAATCGTGACTGTA LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGMAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACAGTTCCGTTGCAAATGGTTGAATTCTACTTCATCCTTGCTGCT---------GTT---ACGGCCGTCAGTGCT---GGCATA------------------------------------TTCTGGCGA---CTCTTGATCGGCTCGCTCGTTATGCTAGTGGCAGGTTATGCAGGTGAA---------GCT------------------GGT------CTG---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCGGGC---TTTATTGTAGGAATGGCTGGCTGGGCATATATCCTGTATGAGATC---------------TTC------GCT---GGCGAGGCGGGTAAAGCTTCTGCTGAG------AAA---GCTCCAGCATCTGTG---CAG---AGT---GCC---TTT---GGA---ACGATG---CGGTTAATCGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926637 [IV-Proteo4-d] PRGD_OTU002a_6bfff68b0f9790bbac344f8d89a614fe gb|KJ926637| PRGD_OTU002a_6bfff68b0f9790bbac344f8d89a614fe, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_6bfff68b0f9790bbac344f8d89a614fe, putative proteorhodopsin gene, partial cds. KJ926637 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Arctic Ocean-Atlantic side (71.501, 19.8025) TTAATTACAGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTCGCGGCTGTAACGGCCGTCAGTGCTGGCATTTTCTGGCGACTACTGATCGGTTCGCTCGTAATGTTGGTGGCAGGTTATGCAGGTGAAGCCGGCCTGATAAATGCGTGGGCAGGATTTATTGTGGGTATGGCGGGATGGGCGTACATCTTGTACGAGATTTTCGCTGGCGAGGCGGGCAAAGCTTCCGCTGAGAAAGCCCCAGCATCTGTTCAGAGTGCCTTTGGAACTATGCGGTTAATTGTGACGGTA LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGMAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTCGCGGCT---------GTA---ACGGCCGTCAGTGCT---GGCATT------------------------------------TTCTGGCGA---CTACTGATCGGTTCGCTCGTAATGTTGGTGGCAGGTTATGCAGGTGAA---------GCC------------------GGC------CTG---------------------------------ATA------------------------------------------------------------------AATGCG------------------TGGGCAGGA---TTTATTGTGGGTATGGCGGGATGGGCGTACATCTTGTACGAGATT---------------TTC------GCT---GGCGAGGCGGGCAAAGCTTCCGCTGAG------AAA---GCCCCAGCATCTGTT---CAG---AGT---GCC---TTT---GGA---ACTATG---CGGTTAATTGTGACGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926688 [IV-Proteo4-d] PRGD_OTU002a_ce8cf5cd31d17b9d2b866d38995480cd gb|KJ926688| PRGD_OTU002a_ce8cf5cd31d17b9d2b866d38995480cd, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_ce8cf5cd31d17b9d2b866d38995480cd, putative proteorhodopsin gene, partial cds. KJ926688 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTCGCGGCTGTAACGGCCGTCAGTGCTGGCATATTCTGGCGACTACTGATCGGTTCGCTCGTAATGTTGGTGGCAGGCTATGCAGGTGAAGCCGGCCTGATAAATGCGTGGGCAGGATTTATTGTAGGTATGGCGGGATGGGCGTACATCTTGTACGAGATTTTCGCTGGCGAGGCGGGCAAAGCTTCCGCTGAGAAAGCCCCAGCATCTGTTCAGAGTGCCTTTGGAACTATGCGGTTAATTGTGACGGTA LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGMAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTCGCGGCT---------GTA---ACGGCCGTCAGTGCT---GGCATA------------------------------------TTCTGGCGA---CTACTGATCGGTTCGCTCGTAATGTTGGTGGCAGGCTATGCAGGTGAA---------GCC------------------GGC------CTG---------------------------------ATA------------------------------------------------------------------AATGCG------------------TGGGCAGGA---TTTATTGTAGGTATGGCGGGATGGGCGTACATCTTGTACGAGATT---------------TTC------GCT---GGCGAGGCGGGCAAAGCTTCCGCTGAG------AAA---GCCCCAGCATCTGTT---CAG---AGT---GCC---TTT---GGA---ACTATG---CGGTTAATTGTGACGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926691 [IV-Proteo4-d] PRGD_OTU002a_d0ea08deee2905edd9d69c8e978ea06d gb|KJ926691| PRGD_OTU002a_d0ea08deee2905edd9d69c8e978ea06d, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_d0ea08deee2905edd9d69c8e978ea06d, putative proteorhodopsin gene, partial cds. KJ926691 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-33.28, 45.35) TTAATTACAGTTCCGCTGCAAATGGTTGAATTCTACTTCATCCTCGCGGCTGTTACAGCCGTCAGTGCTGGCATATTCTGGCGACTGCTGATCGGTTCGCTCGTGATGTTGGTGGCAGGTTATGCAGGTGAAGCCGGCCTAATAAATGCGTGGGCAGGATTTATTGTAGGCATGGCGGGATGGGCGTACATCTTGTACGAGATTTTCGCTGGCGAGGCGGGCAAAGCTTCCGCTGAGAAAGCCCCAGCATCTGTTCAGAGTGCCTTTGGAACTATGCGGTTAATTGTGACGGTG LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGMAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCGCTGCAAATGGTTGAATTCTACTTCATCCTCGCGGCT---------GTT---ACAGCCGTCAGTGCT---GGCATA------------------------------------TTCTGGCGA---CTGCTGATCGGTTCGCTCGTGATGTTGGTGGCAGGTTATGCAGGTGAA---------GCC------------------GGC------CTA---------------------------------ATA------------------------------------------------------------------AATGCG------------------TGGGCAGGA---TTTATTGTAGGCATGGCGGGATGGGCGTACATCTTGTACGAGATT---------------TTC------GCT---GGCGAGGCGGGCAAAGCTTCCGCTGAG------AAA---GCCCCAGCATCTGTT---CAG---AGT---GCC---TTT---GGA---ACTATG---CGGTTAATTGTGACGGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926599 [IV-Proteo4-d] PRGD_OTU002a_1596821399b35e169517833e24375467 gb|KJ926599| PRGD_OTU002a_1596821399b35e169517833e24375467, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_1596821399b35e169517833e24375467, putative proteorhodopsin gene, partial cds. KJ926599 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTGATTACTGTTCCGCTGCAAATGGTTGAGTTCTACTTCATCCTTGCTGCTGTTACGGCAGTAAGTGCTGGAATATTCTGGCGACTGTTGATCGGTTCGCTCGTAATGTTGGTAGCAGGTTATGCAGGCGAAGCCGGCCTGATAAACGCTTGGGCAGGCTTTATCGTAGGTATGGCTGGTTGGGCGTACATTCTGTACGAAATTTTCGCTGGCGAGGCGGGTAAAGCTTCCGCTGAGAAAGCACCAGCTTCCGTGCAGAGCGCCTTCGGAACGATGCGGTTAATTGTGACGGTG LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGMAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTTCCGCTGCAAATGGTTGAGTTCTACTTCATCCTTGCTGCT---------GTT---ACGGCAGTAAGTGCT---GGAATA------------------------------------TTCTGGCGA---CTGTTGATCGGTTCGCTCGTAATGTTGGTAGCAGGTTATGCAGGCGAA---------GCC------------------GGC------CTG---------------------------------ATA------------------------------------------------------------------AACGCT------------------TGGGCAGGC---TTTATCGTAGGTATGGCTGGTTGGGCGTACATTCTGTACGAAATT---------------TTC------GCT---GGCGAGGCGGGTAAAGCTTCCGCTGAG------AAA---GCACCAGCTTCCGTG---CAG---AGC---GCC---TTC---GGA---ACGATG---CGGTTAATTGTGACGGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926641 [IV-Proteo4-d] PRGD_OTU002a_7175705ec25a7e793c8a0ec0e926b39d gb|KJ926641| PRGD_OTU002a_7175705ec25a7e793c8a0ec0e926b39d, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_7175705ec25a7e793c8a0ec0e926b39d, putative proteorhodopsin gene, partial cds. KJ926641 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-14.48, 113.45) TTGATTACTGTTCCGCTGCAAATGGTAGAATTCTACTTCATCCTTGCTGCTGTTACGGCCGTTAGCGCTGGCATATTCTGGCGGTTGCTGATCGGCTCTCTCGTGATGTTGGTGGCAGGTTATGCTGGTGAAGCCGGCCTAATAAACGCCTGGGCTGGCTTTATAGTCGGACTGGCGGGCTGGGCGTACATCTTGTACGAGATTTTCGCTGGCGAGGCAGGTAAAGCTTCCGCTGAGAAAGCTCCAGCATCTGTGCAGAGTGCCTTTGGAACGATGCGGTTAATTGTGACCGTA LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTTCCGCTGCAAATGGTAGAATTCTACTTCATCCTTGCTGCT---------GTT---ACGGCCGTTAGCGCT---GGCATA------------------------------------TTCTGGCGG---TTGCTGATCGGCTCTCTCGTGATGTTGGTGGCAGGTTATGCTGGTGAA---------GCC------------------GGC------CTA---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCTGGC---TTTATAGTCGGACTGGCGGGCTGGGCGTACATCTTGTACGAGATT---------------TTC------GCT---GGCGAGGCAGGTAAAGCTTCCGCTGAG------AAA---GCTCCAGCATCTGTG---CAG---AGT---GCC---TTT---GGA---ACGATG---CGGTTAATTGTGACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926652 [IV-Proteo4-d] PRGD_OTU002a_8b9591ed6a8044559a8cc12542fcd80b gb|KJ926652| PRGD_OTU002a_8b9591ed6a8044559a8cc12542fcd80b, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_8b9591ed6a8044559a8cc12542fcd80b, putative proteorhodopsin gene, partial cds. KJ926652 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATAACAGTTCCGCTGCAGATGGTTGAATTCTACTTCATCCTTGCTGCTGTTACGGCAGTTAGTGCTGGCATATTCTGGCGGCTGCTGATCGGTTCGCTCGTAATGTTGGTGGCAGGTTATGCCGGTGAAGCTGGCCTGATAAACGCATGGGCCGGCTTTATAGTAGGAATGGCAGGCTGGGCTTATATCTTGTACGAGATCTTCGCTGGCGAGGCAGGTAAAGCTTCTGCTGAGAAAGCTCCAGCATCTGTGCAGAGTGCCTTTGGAACGATGCGGTTAATTGTGACTGTC LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGMAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACAGTTCCGCTGCAGATGGTTGAATTCTACTTCATCCTTGCTGCT---------GTT---ACGGCAGTTAGTGCT---GGCATA------------------------------------TTCTGGCGG---CTGCTGATCGGTTCGCTCGTAATGTTGGTGGCAGGTTATGCCGGTGAA---------GCT------------------GGC------CTG---------------------------------ATA------------------------------------------------------------------AACGCA------------------TGGGCCGGC---TTTATAGTAGGAATGGCAGGCTGGGCTTATATCTTGTACGAGATC---------------TTC------GCT---GGCGAGGCAGGTAAAGCTTCTGCTGAG------AAA---GCTCCAGCATCTGTG---CAG---AGT---GCC---TTT---GGA---ACGATG---CGGTTAATTGTGACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926678 [IV-Proteo4-d] PRGD_OTU002a_bba1f76e4dfa8cff2074a116155d29a7 gb|KJ926678| PRGD_OTU002a_bba1f76e4dfa8cff2074a116155d29a7, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_bba1f76e4dfa8cff2074a116155d29a7, putative proteorhodopsin gene, partial cds. KJ926678 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Atlantic side (73.9992, 19.2097) TTGATTACGGTTCCGCTGCAAATGGTTGAATTCTACTTCATTCTTGCTGCTGTTATGGCGGTCAGTGCGGGCATATTCTGGCGGCTGTTGATCGGGTCGCTCGTTATGCTGGGGGCAGGTTATGCCGGTGAAGCTGGCCTAATAAACGCCTGGGCTGGATTTATAGTAGGTTTGGCAGGATGGGCATACATTTTGTATGAAATCTTTGCCGGCGAGGCGGGTAAAGCTTCTGCCGAAAAAGCTCCAGCATCGGTGCAGAGTGCCTTTGGGACCATGCGATTAATCGTAACGGTT LITVPLQMVEFYFILAAVMAVSAGIFWRLLIGSLVMLGAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACGGTTCCGCTGCAAATGGTTGAATTCTACTTCATTCTTGCTGCT---------GTT---ATGGCGGTCAGTGCG---GGCATA------------------------------------TTCTGGCGG---CTGTTGATCGGGTCGCTCGTTATGCTGGGGGCAGGTTATGCCGGTGAA---------GCT------------------GGC------CTA---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCTGGA---TTTATAGTAGGTTTGGCAGGATGGGCATACATTTTGTATGAAATC---------------TTT------GCC---GGCGAGGCGGGTAAAGCTTCTGCCGAA------AAA---GCTCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGG---ACCATG---CGATTAATCGTAACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-MAVSA-GI------------FWR-LLIGSLVMLGAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926666 [IV-Proteo4-d] PRGD_OTU002a_a36cbd2f7f4acf0035d155ec0d9b9722 gb|KJ926666| PRGD_OTU002a_a36cbd2f7f4acf0035d155ec0d9b9722, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_a36cbd2f7f4acf0035d155ec0d9b9722, putative proteorhodopsin gene, partial cds. KJ926666 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACAGTTCCGCTTCAAATGGTTGAATTCTACTTCATCCTCGCTGCTGTCACAGCGGTAAGCGCTGGCATATTCTGGCGTTTACTGATCGGATCGCTTGTGATGTTGGTGGCAGGTTATGCTGGTGAAGCCGGACTGATAAACGCCTGGGCTGGCTTTATCGTTGGTTTGGCGGGATGGGCGTACATATTGTACGAAATCTTCGCTGGCGAGGCAGGCAAAGCTTCCGCTGAAAAAGCTCCAGCATCGGTGCAGAGCGCCTTTGGAACAATGCGTTTAATTGTAACAGTC LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTTCAAATGGTTGAATTCTACTTCATCCTCGCTGCT---------GTC---ACAGCGGTAAGCGCT---GGCATA------------------------------------TTCTGGCGT---TTACTGATCGGATCGCTTGTGATGTTGGTGGCAGGTTATGCTGGTGAA---------GCC------------------GGA------CTG---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCTGGC---TTTATCGTTGGTTTGGCGGGATGGGCGTACATATTGTACGAAATC---------------TTC------GCT---GGCGAGGCAGGCAAAGCTTCCGCTGAA------AAA---GCTCCAGCATCGGTG---CAG---AGC---GCC---TTT---GGA---ACAATG---CGTTTAATTGTAACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926645 [IV-Proteo4-d] PRGD_OTU002a_7dd93488a9aca28ea3f04948c78bfc92 gb|KJ926645| PRGD_OTU002a_7dd93488a9aca28ea3f04948c78bfc92, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_7dd93488a9aca28ea3f04948c78bfc92, putative proteorhodopsin gene, partial cds. KJ926645 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTAATCACCGTTCCACTTCAGATGGTTGAATTCTACTTCATCCTCGCTGCTGTTACGGCGGTCAGTGCTGGCATCTTCTGGCGGTTGCTGATTGGATCGCTAGTAATGCTGGTCGCAGGTTATGCGGGTGAAGCTGGCCTAATAAACGCTTGGGCTGGCTTTATCGTGGGCATGGCAGGATGGGCATACATCTTGTATGAAATCTTTGCTGGTGAGGCGGGCAAAGCTTCCGCTGAAAAGGCTCCAGCATCGGTGCAAAGCGCCTTCGGCACAATGCGGTTAATCGTAACAGTC LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGMAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACCGTTCCACTTCAGATGGTTGAATTCTACTTCATCCTCGCTGCT---------GTT---ACGGCGGTCAGTGCT---GGCATC------------------------------------TTCTGGCGG---TTGCTGATTGGATCGCTAGTAATGCTGGTCGCAGGTTATGCGGGTGAA---------GCT------------------GGC------CTA---------------------------------ATA------------------------------------------------------------------AACGCT------------------TGGGCTGGC---TTTATCGTGGGCATGGCAGGATGGGCATACATCTTGTATGAAATC---------------TTT------GCT---GGTGAGGCGGGCAAAGCTTCCGCTGAA------AAG---GCTCCAGCATCGGTG---CAA---AGC---GCC---TTC---GGC---ACAATG---CGGTTAATCGTAACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926690 [IV-Proteo4-d] PRGD_OTU002a_d09a8f34fadd2445975c2df5c5139e1c gb|KJ926690| PRGD_OTU002a_d09a8f34fadd2445975c2df5c5139e1c, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_d09a8f34fadd2445975c2df5c5139e1c, putative proteorhodopsin gene, partial cds. KJ926690 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTGATCACCGTTCCACTTCAGATGGTTGAATTTTACTTCATCCTCGCTGCTGTTACGGCGGTCAGTGCTGGCATCTTCTGGCGGTTGCTGATTGGATCGCTAGTAATGCTGGTCGCAGGTTATGCGGGTGAAGCTGGCCTAATAAACGCTTGGGCTGGCTTTATCGTGGGCATGGCAGGATGGGCATACATCTTGTATGAAATCTTTGCTGGTGAGGCGGGCAAAGCTTCCGCTGAAAAGGCTCCAGCATCGGTGCAAAGCGCCTTCGGCACAATGCGGTTAATCGTAACAGTC LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGMAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTTCCACTTCAGATGGTTGAATTTTACTTCATCCTCGCTGCT---------GTT---ACGGCGGTCAGTGCT---GGCATC------------------------------------TTCTGGCGG---TTGCTGATTGGATCGCTAGTAATGCTGGTCGCAGGTTATGCGGGTGAA---------GCT------------------GGC------CTA---------------------------------ATA------------------------------------------------------------------AACGCT------------------TGGGCTGGC---TTTATCGTGGGCATGGCAGGATGGGCATACATCTTGTATGAAATC---------------TTT------GCT---GGTGAGGCGGGCAAAGCTTCCGCTGAA------AAG---GCTCCAGCATCGGTG---CAA---AGC---GCC---TTC---GGC---ACAATG---CGGTTAATCGTAACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926630 [IV-Proteo4-d] PRGD_OTU002a_59577d8da8fedec32e1773784e08b00e gb|KJ926630| PRGD_OTU002a_59577d8da8fedec32e1773784e08b00e, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_59577d8da8fedec32e1773784e08b00e, putative proteorhodopsin gene, partial cds. KJ926630 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATCACCGTTCCACTTCAGATGGTTGAATTCTACTTCATCCTCGCTGCTGTTACCGCGGTCAGTGCTGGCATTTTCTGGCGGTTGCTGATTGGATCGCTAGTAATGCTGGTCGCAGGTTATGCGGGTGAAGCTGGCCTAATAAACGCTTGGGCTGGCTTTATCGTAGGCATGGCAGGATGGGCATACATCTTGTATGAAATCTTTGCTGGTGAGGCGGGCAAAGCTTCCGCTGAAAAGGCTCCAGCATCGGTGCAAAGCGCCTTCGGCACAATGCGGTTAATCGTAACAGTC LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGMAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTTCCACTTCAGATGGTTGAATTCTACTTCATCCTCGCTGCT---------GTT---ACCGCGGTCAGTGCT---GGCATT------------------------------------TTCTGGCGG---TTGCTGATTGGATCGCTAGTAATGCTGGTCGCAGGTTATGCGGGTGAA---------GCT------------------GGC------CTA---------------------------------ATA------------------------------------------------------------------AACGCT------------------TGGGCTGGC---TTTATCGTAGGCATGGCAGGATGGGCATACATCTTGTATGAAATC---------------TTT------GCT---GGTGAGGCGGGCAAAGCTTCCGCTGAA------AAG---GCTCCAGCATCGGTG---CAA---AGC---GCC---TTC---GGC---ACAATG---CGGTTAATCGTAACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926698 [IV-Proteo4-d] PRGD_OTU002a_df2693832d960e57af2d2adb4143d2c1 gb|KJ926698| PRGD_OTU002a_df2693832d960e57af2d2adb4143d2c1, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_df2693832d960e57af2d2adb4143d2c1, putative proteorhodopsin gene, partial cds. KJ926698 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACAGTTCCGCTTCAAATGGTTGAATTCTACTTCATCCTCGCTGCTGTCACGGCGGTCAGTGCTGGCATCTTCTGGCGGTTGCTGATTGGATCGCTTGTAATGCTGGTCGCGGGTTATGCCGGTGAAGCTGGCCTGATAAACGCCTGGGCTGGCTTTATCGTAGGCTTGGCAGGATGGGCATACATCTTGTATGAAATCTTTGCTGGTGAGGCGGGCAAAGCTTCTGCCGAAAAAGCTCCGGCATCGGTGCAAAGCGCCTTCGGCACAATGCGGTTAATCGTAACAGTG LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTTCAAATGGTTGAATTCTACTTCATCCTCGCTGCT---------GTC---ACGGCGGTCAGTGCT---GGCATC------------------------------------TTCTGGCGG---TTGCTGATTGGATCGCTTGTAATGCTGGTCGCGGGTTATGCCGGTGAA---------GCT------------------GGC------CTG---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCTGGC---TTTATCGTAGGCTTGGCAGGATGGGCATACATCTTGTATGAAATC---------------TTT------GCT---GGTGAGGCGGGCAAAGCTTCTGCCGAA------AAA---GCTCCGGCATCGGTG---CAA---AGC---GCC---TTC---GGC---ACAATG---CGGTTAATCGTAACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926612 [IV-Proteo4-d] PRGD_OTU002a_3a7922ac75a453aba65e8eeb6534e861 gb|KJ926612| PRGD_OTU002a_3a7922ac75a453aba65e8eeb6534e861, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_3a7922ac75a453aba65e8eeb6534e861, putative proteorhodopsin gene, partial cds. KJ926612 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATCACAGTTCCGCTTCAGATGGTTGAATTCTACTTCATCCTCGCTGCTGTTACGGCGGTCAGTGCAGGCATATTCTGGCGGTTGCTGATTGGTTCGCTCGTAATGCTAGTCGCAGGTTACGCGGGTGAAGCTGGCCTGATAAACGCCTGGGCTGGCTTTATCGTAGGCATGGCAGGATGGGCATACATCTTGTATGAAATCTTTGCTGGTGAGGCGGGCAAAGCTTCCGCTGAAAAAGCTCCAGCATCTGTGCAAAGCGCCTTCGGTACAATGCGGTTAATCGTGACAGTG LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGMAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTTCAGATGGTTGAATTCTACTTCATCCTCGCTGCT---------GTT---ACGGCGGTCAGTGCA---GGCATA------------------------------------TTCTGGCGG---TTGCTGATTGGTTCGCTCGTAATGCTAGTCGCAGGTTACGCGGGTGAA---------GCT------------------GGC------CTG---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCTGGC---TTTATCGTAGGCATGGCAGGATGGGCATACATCTTGTATGAAATC---------------TTT------GCT---GGTGAGGCGGGCAAAGCTTCCGCTGAA------AAA---GCTCCAGCATCTGTG---CAA---AGC---GCC---TTC---GGT---ACAATG---CGGTTAATCGTGACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926674 [IV-Proteo4-d] PRGD_OTU002a_b4e5b2864fdf19ba92c09b0a2d0a7460 gb|KJ926674| PRGD_OTU002a_b4e5b2864fdf19ba92c09b0a2d0a7460, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_b4e5b2864fdf19ba92c09b0a2d0a7460, putative proteorhodopsin gene, partial cds. KJ926674 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-14.48, 113.45; -33.28, 45.35) TTGATCACAGTTCCGCTTCAGATGGTTGAATTCTACTTCATCCTCGCTGCTGTTACGGCGGTCAGTGCCGGCATATTCTGGCGGTTGCTGATTGGTTCGCTCGTAATGCTAGTTGCAGGTTACGCGGGTGAAGCTGGCCTGATAAACGCTTGGGCTGGCTTTATCGTAGGCATGGCAGGATGGGCATACATCTTGTATGAAATCTTTGCTGGTGAGGCGGGCAAAGCTTCCGCTGAAAAAGCTCCAGCATCTGTGCAAAGCGCCTTCGGTACAATGCGGTTAATCGTGACAGTG LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGMAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTTCAGATGGTTGAATTCTACTTCATCCTCGCTGCT---------GTT---ACGGCGGTCAGTGCC---GGCATA------------------------------------TTCTGGCGG---TTGCTGATTGGTTCGCTCGTAATGCTAGTTGCAGGTTACGCGGGTGAA---------GCT------------------GGC------CTG---------------------------------ATA------------------------------------------------------------------AACGCT------------------TGGGCTGGC---TTTATCGTAGGCATGGCAGGATGGGCATACATCTTGTATGAAATC---------------TTT------GCT---GGTGAGGCGGGCAAAGCTTCCGCTGAA------AAA---GCTCCAGCATCTGTG---CAA---AGC---GCC---TTC---GGT---ACAATG---CGGTTAATCGTGACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926682 [IV-Proteo4-d] PRGD_OTU002a_c0f8478b6c19ac2d25240927c86ad396 gb|KJ926682| PRGD_OTU002a_c0f8478b6c19ac2d25240927c86ad396, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_c0f8478b6c19ac2d25240927c86ad396, putative proteorhodopsin gene, partial cds. KJ926682 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATTACAGTTCCACTACAGATGGTTGAATTCTACTTCATCCTAGCTGCTGTTACGGCAGTCAGTGCTGGCATTTTCTGGCGGCTGCTGATTGGATCGCTCGTAATGTTGGTCGCGGGTTATGCGGGTGAAGCTGGCCTGATAAACGCCTGGGCTGGTTTTATTGTAGGAATGGCAGGATGGGCTTACATCTTGTATGAAATCTTTGCTGGTGAGGCGGGCAAGGCTTCCGCTGAAAAAGCTCCGGCATCGGTGCAAAGCGCCTTCGGTACAATGCGGTTAATCGTAACAGTT LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGMAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACAGTTCCACTACAGATGGTTGAATTCTACTTCATCCTAGCTGCT---------GTT---ACGGCAGTCAGTGCT---GGCATT------------------------------------TTCTGGCGG---CTGCTGATTGGATCGCTCGTAATGTTGGTCGCGGGTTATGCGGGTGAA---------GCT------------------GGC------CTG---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCTGGT---TTTATTGTAGGAATGGCAGGATGGGCTTACATCTTGTATGAAATC---------------TTT------GCT---GGTGAGGCGGGCAAGGCTTCCGCTGAA------AAA---GCTCCGGCATCGGTG---CAA---AGC---GCC---TTC---GGT---ACAATG---CGGTTAATCGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926687 [IV-Proteo4-d] PRGD_OTU002a_cda5100a0b6d73da50d0e19f3a6f3a3e gb|KJ926687| PRGD_OTU002a_cda5100a0b6d73da50d0e19f3a6f3a3e, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_cda5100a0b6d73da50d0e19f3a6f3a3e, putative proteorhodopsin gene, partial cds. KJ926687 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTGATCACCGTTCCGCTACAGATGGTTGAATTCTACTTCATCCTCGCTGCTGTTACGGCAGTCAGTGCTGGCATCTTCTGGCGTCTGCTAATCGGATCGCTCGTGATGTTGGTCGCAGGGTATGCGGGTGAAGCAGGCCTGATAAACGCCTGGGCTGGCTTTATCGTAGGTATGGCAGGATGGGCGTACATCTTGTACGAAATCTTTGCTGGTGAGGCGGGCAAAGCTTCCGCTGAAAAAGCTCCAGCATCGGTACAAAGTGCCTTCGGAACAATGCGGTTGATCGTAACCGTC LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGMAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTTCCGCTACAGATGGTTGAATTCTACTTCATCCTCGCTGCT---------GTT---ACGGCAGTCAGTGCT---GGCATC------------------------------------TTCTGGCGT---CTGCTAATCGGATCGCTCGTGATGTTGGTCGCAGGGTATGCGGGTGAA---------GCA------------------GGC------CTG---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCTGGC---TTTATCGTAGGTATGGCAGGATGGGCGTACATCTTGTACGAAATC---------------TTT------GCT---GGTGAGGCGGGCAAAGCTTCCGCTGAA------AAA---GCTCCAGCATCGGTA---CAA---AGT---GCC---TTC---GGA---ACAATG---CGGTTGATCGTAACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926595 [IV-Proteo4-d] PRGD_OTU002a_0d7d2f3813ed9298118f1dabc005b683 gb|KJ926595| PRGD_OTU002a_0d7d2f3813ed9298118f1dabc005b683, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_0d7d2f3813ed9298118f1dabc005b683, putative proteorhodopsin gene, partial cds. KJ926595 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATCACAGTTCCGCTACAGATGGTTGAATTCTACTTCATCCTTGCCGCGGTTACGGCAGTCAGTGCAGGCATCTTCTGGCGGCTGCTGATTGGATCGCTCGTAATGTTGGTCGCAGGGTATGCAGGCGAAGCTGGCCTGATAAATGCCTGGGCTGGCTTTATCGTAGGTATGGCAGGATGGGCTTACATCTTGTACGAGATCTTTGCTGGCGAGGCGGGTAAAGCTTCTGCTGAAAAAGCTCCAGCATCGGTGCAAAGTGCCTTCGGAACAATGCGGTTGATCGTAACAGTT LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGMAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTACAGATGGTTGAATTCTACTTCATCCTTGCCGCG---------GTT---ACGGCAGTCAGTGCA---GGCATC------------------------------------TTCTGGCGG---CTGCTGATTGGATCGCTCGTAATGTTGGTCGCAGGGTATGCAGGCGAA---------GCT------------------GGC------CTG---------------------------------ATA------------------------------------------------------------------AATGCC------------------TGGGCTGGC---TTTATCGTAGGTATGGCAGGATGGGCTTACATCTTGTACGAGATC---------------TTT------GCT---GGCGAGGCGGGTAAAGCTTCTGCTGAA------AAA---GCTCCAGCATCGGTG---CAA---AGT---GCC---TTC---GGA---ACAATG---CGGTTGATCGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926593 [IV-Proteo4-d] PRGD_OTU002a_0b8c27b8720c39bde82e47f9847c1759 gb|KJ926593| PRGD_OTU002a_0b8c27b8720c39bde82e47f9847c1759, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_0b8c27b8720c39bde82e47f9847c1759, putative proteorhodopsin gene, partial cds. KJ926593 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTGATCACGGTTCCGCTGCAGATGGTTGAATTCTACTTCATCCTCGCTGCCGTTACGGCGGTTAGTGCTGGCATTTTCTGGCGGCTGCTGATTGGATCTCTCGTGATGTTGGTCGCAGGGTATGCCGGCGAGGCTGGCCTAATAAACGCCTGGGCCGGCTTTATCGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATCTTCGCTGGTGAGGCGGGCAGAGCGTCTGCTGAAAAAGCTCCAGCATCGGTGCAAAGTGCCTTTGGAACAATGCGGTTAATCGTAACGGTT LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGRASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACGGTTCCGCTGCAGATGGTTGAATTCTACTTCATCCTCGCTGCC---------GTT---ACGGCGGTTAGTGCT---GGCATT------------------------------------TTCTGGCGG---CTGCTGATTGGATCTCTCGTGATGTTGGTCGCAGGGTATGCCGGCGAG---------GCT------------------GGC------CTA---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCCGGC---TTTATCGTAGGTTTGGCAGGATGGGCATACATCTTGTACGAAATC---------------TTC------GCT---GGTGAGGCGGGCAGAGCGTCTGCTGAA------AAA---GCTCCAGCATCGGTG---CAA---AGT---GCC---TTT---GGA---ACAATG---CGGTTAATCGTAACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGRASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926647 [IV-Proteo4-d] PRGD_OTU002a_80e2e21a15c8ffc0c526d7d2228eae4a gb|KJ926647| PRGD_OTU002a_80e2e21a15c8ffc0c526d7d2228eae4a, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_80e2e21a15c8ffc0c526d7d2228eae4a, putative proteorhodopsin gene, partial cds. KJ926647 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-33.28, 45.35) CTAATTACCGTTCCGCTGCAGATGGTTGAATTCTACTTCATCCTCGCCGCTGTCACGGCGGTCAGTGCCGGCATCTTCTGGCGGTTGCTAATTGGATCGCTGGTAATGTTAGTTGCAGGTTACGCCGGTGAAGCTGGCCTGATTAATGCTTGGGCTGGCTTTATCGTTGGTTTGGCAGGATGGGCATACATTTTGTATGAAATCTTTGCTGGTGAGGCAGGCAGAGCTTCTGCTGAAAAAGCCCCAGCATCGGTGCAAAGTGCCTTCGGAACAATGCGGCTAATTGTTACAGTA LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGRASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACCGTTCCGCTGCAGATGGTTGAATTCTACTTCATCCTCGCCGCT---------GTC---ACGGCGGTCAGTGCC---GGCATC------------------------------------TTCTGGCGG---TTGCTAATTGGATCGCTGGTAATGTTAGTTGCAGGTTACGCCGGTGAA---------GCT------------------GGC------CTG---------------------------------ATT------------------------------------------------------------------AATGCT------------------TGGGCTGGC---TTTATCGTTGGTTTGGCAGGATGGGCATACATTTTGTATGAAATC---------------TTT------GCT---GGTGAGGCAGGCAGAGCTTCTGCTGAA------AAA---GCCCCAGCATCGGTG---CAA---AGT---GCC---TTC---GGA---ACAATG---CGGCTAATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGRASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926689 [IV-Proteo4-d] PRGD_OTU002a_cec4f88e760294def7ae1f182ab6a42b gb|KJ926689| PRGD_OTU002a_cec4f88e760294def7ae1f182ab6a42b, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_cec4f88e760294def7ae1f182ab6a42b, putative proteorhodopsin gene, partial cds. KJ926689 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -33.28, 45.35) CTGATTACAGTTCCGCTGCAGATGGTTGAATTCTACTTCATCCTCGCTGCTGTCACAGCTGTTAGTGCTGGCATCTTCTGGCGGCTGCTGATTGGATCGCTCGTGATGCTGGTCGCAGGTTACGCAGGTGAAGCTGGCCTGATAAACGCCTGGGCCGGATTTATCGTAGGTCTGGCAGGATGGGCGTACATATTGTACGAAATCTTTGCTGGTGAGGCGGGCAGAGCTTCCGCTGAAAAAGCCCCAGCATCGGTGCAGAGTGCCTTTGGAACAATGCGGTTAATCGTAACGGTC LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGRASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACAGTTCCGCTGCAGATGGTTGAATTCTACTTCATCCTCGCTGCT---------GTC---ACAGCTGTTAGTGCT---GGCATC------------------------------------TTCTGGCGG---CTGCTGATTGGATCGCTCGTGATGCTGGTCGCAGGTTACGCAGGTGAA---------GCT------------------GGC------CTG---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCCGGA---TTTATCGTAGGTCTGGCAGGATGGGCGTACATATTGTACGAAATC---------------TTT------GCT---GGTGAGGCGGGCAGAGCTTCCGCTGAA------AAA---GCCCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGA---ACAATG---CGGTTAATCGTAACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGRASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926621 [IV-Proteo4-d] PRGD_OTU002a_44fc13b7557a0620c272fdd6b6867044 gb|KJ926621| PRGD_OTU002a_44fc13b7557a0620c272fdd6b6867044, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_44fc13b7557a0620c272fdd6b6867044, putative proteorhodopsin gene, partial cds. KJ926621 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -33.28, 45.35) CTGATTACAGTTCCGCTGCAGATGGTTGAATTCTACTTCATCCTCGCTGCTGTTACAGCTGTTAGTGCTGGCATCTTCTGGCGGCTGCTGATTGGATCGCTCGTGATGCTGGTCGCAGGTTACGCAGGTGAAGCTGGCCTAATAAACGCCTGGGCCGGATTTATCGTAGGTCTGGCAGGATGGGCGTACATATTGTACGAAATCTTTGCCGGTGAGGCGGGCAGAGCTTCCGCTGAAAAAGCCCCAGCATCGGTGCAGAGTGCCTTTGGAACAATGCGGTTAATCGTAACGGTC LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGRASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACAGTTCCGCTGCAGATGGTTGAATTCTACTTCATCCTCGCTGCT---------GTT---ACAGCTGTTAGTGCT---GGCATC------------------------------------TTCTGGCGG---CTGCTGATTGGATCGCTCGTGATGCTGGTCGCAGGTTACGCAGGTGAA---------GCT------------------GGC------CTA---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCCGGA---TTTATCGTAGGTCTGGCAGGATGGGCGTACATATTGTACGAAATC---------------TTT------GCC---GGTGAGGCGGGCAGAGCTTCCGCTGAA------AAA---GCCCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGA---ACAATG---CGGTTAATCGTAACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGRASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926643 [IV-Proteo4-d] PRGD_OTU002a_79eefcf008f5f04320a1d74c48998ea2 gb|KJ926643| PRGD_OTU002a_79eefcf008f5f04320a1d74c48998ea2, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_79eefcf008f5f04320a1d74c48998ea2, putative proteorhodopsin gene, partial cds. KJ926643 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) CTGATTACAGTTCCGCTGCAGATGGTTGAATTCTACTTCATCCTCGCTGCTGTTACAGCTGTTAGTGCTGGCATCTTCTGGCGGCTGCTGATTGGATCGCTCGTGATGCTGGTCGCAGGTTACGCTGGTGAAGCTGGCCTAATAAACGCTTGGGCCGGATTTATCGTAGGTCTGGCAGGATGGGCATACATATTGTACGAAATCTTTGCTGGTGAGGCGGGCAGAGCTTCCGCTGAAAAAGCCCCAGCATCCGTGCAGAGTGCCTTTGGAACAATGCGGTTAATCGTAACGGTC LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGRASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACAGTTCCGCTGCAGATGGTTGAATTCTACTTCATCCTCGCTGCT---------GTT---ACAGCTGTTAGTGCT---GGCATC------------------------------------TTCTGGCGG---CTGCTGATTGGATCGCTCGTGATGCTGGTCGCAGGTTACGCTGGTGAA---------GCT------------------GGC------CTA---------------------------------ATA------------------------------------------------------------------AACGCT------------------TGGGCCGGA---TTTATCGTAGGTCTGGCAGGATGGGCATACATATTGTACGAAATC---------------TTT------GCT---GGTGAGGCGGGCAGAGCTTCCGCTGAA------AAA---GCCCCAGCATCCGTG---CAG---AGT---GCC---TTT---GGA---ACAATG---CGGTTAATCGTAACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGRASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926598 [IV-Proteo4-d] PRGD_OTU002a_14f4dacf147686daca11d021493275e7 gb|KJ926598| PRGD_OTU002a_14f4dacf147686daca11d021493275e7, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_14f4dacf147686daca11d021493275e7, putative proteorhodopsin gene, partial cds. KJ926598 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACAGTTCCGCTGCAGATGGTTGAATTCTACTTCATCCTCGCTGCTGTCACTGCTGTCAGTGCTGGCATCTTCTGGCGACTGCTTATTGGATCGCTCGTAATGTTGGTCGCAGGTTACGCCGGCGAAGCTGGCTTGATAAACGCCTGGGCCGGATTTATCGTAGGTCTGGCAGGATGGGCATACATCCTGTACGAAATCTTTGCTGGTGAGGCGGGCAGAGCTTCCGCTGAAAAAGCCCCAGCATCGGTGCAGAGTGCCTTTGGAACAATGCGGTTAATCGTAACGGTC LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGRASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTGCAGATGGTTGAATTCTACTTCATCCTCGCTGCT---------GTC---ACTGCTGTCAGTGCT---GGCATC------------------------------------TTCTGGCGA---CTGCTTATTGGATCGCTCGTAATGTTGGTCGCAGGTTACGCCGGCGAA---------GCT------------------GGC------TTG---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCCGGA---TTTATCGTAGGTCTGGCAGGATGGGCATACATCCTGTACGAAATC---------------TTT------GCT---GGTGAGGCGGGCAGAGCTTCCGCTGAA------AAA---GCCCCAGCATCGGTG---CAG---AGT---GCC---TTT---GGA---ACAATG---CGGTTAATCGTAACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGRASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926650 [IV-Proteo4-d] PRGD_OTU002a_8912b3d5cd13ad40edf4eb4c1dfe6ea5 gb|KJ926650| PRGD_OTU002a_8912b3d5cd13ad40edf4eb4c1dfe6ea5, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_8912b3d5cd13ad40edf4eb4c1dfe6ea5, putative proteorhodopsin gene, partial cds. KJ926650 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTGATCACAGTTCCGCTGCAGATGGTTGAATTCTACTTCATCCTCGCTGCTGTCACGGCTGTCAGTGCTGGCATCTTCTGGAGACTGCTTATTGGATCGCTCGTAATGTTAGTCGCAGGTTACGCCGGGGAAGCTGGGTTGATAAACGCCTGGGCCGGATTTATCGTAGGTCTGGCAGGATGGGCATACATCCTGTACGAAATCTTTGCTGGTGAGGCGGGCAGAGCTTCCGCTGAAAAAGCCCCAGCATCGGTGCAGAGTGCGTTTGGAACAATGCGGTTAATCGTAACGGTC LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGRASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCGCTGCAGATGGTTGAATTCTACTTCATCCTCGCTGCT---------GTC---ACGGCTGTCAGTGCT---GGCATC------------------------------------TTCTGGAGA---CTGCTTATTGGATCGCTCGTAATGTTAGTCGCAGGTTACGCCGGGGAA---------GCT------------------GGG------TTG---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCCGGA---TTTATCGTAGGTCTGGCAGGATGGGCATACATCCTGTACGAAATC---------------TTT------GCT---GGTGAGGCGGGCAGAGCTTCCGCTGAA------AAA---GCCCCAGCATCGGTG---CAG---AGT---GCG---TTT---GGA---ACAATG---CGGTTAATCGTAACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGRASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926608 [IV-Proteo4-d] PRGD_OTU002a_3601c8a3b661bb4d31f9ff2cdb1a00c8 gb|KJ926608| PRGD_OTU002a_3601c8a3b661bb4d31f9ff2cdb1a00c8, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_3601c8a3b661bb4d31f9ff2cdb1a00c8, putative proteorhodopsin gene, partial cds. KJ926608 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) ATAATCACAGTCCCGCTACAAATGGTTGAATTCTACTTCATCCTTGCTGCTGTTACGGCAGTTAGTGCTGGCATATTCTGGCGTTTGCTCATTGGATCGCTCGTAATGTTAGTCGCGGGCTACGCTGGCGAAGCTGGCTTGATAAACGCCTGGGCTGGTTTTATCGTTGGAATGGCTGGATGGGCATACATTTTGTACGAAATCTTTGCCGGTGAAGCGGGCAAAGCCTCCGCTGCAAATGCCCCAGCGTCTGTGCAGAGTGCCTTTGGAACGATGCGTTTAATCGTGACGGTC IITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGMAGWAYILYEIFAGEAGKASAANAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATCACAGTCCCGCTACAAATGGTTGAATTCTACTTCATCCTTGCTGCT---------GTT---ACGGCAGTTAGTGCT---GGCATA------------------------------------TTCTGGCGT---TTGCTCATTGGATCGCTCGTAATGTTAGTCGCGGGCTACGCTGGCGAA---------GCT------------------GGC------TTG---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCTGGT---TTTATCGTTGGAATGGCTGGATGGGCATACATTTTGTACGAAATC---------------TTT------GCC---GGTGAAGCGGGCAAAGCCTCCGCTGCA------AAT---GCCCCAGCGTCTGTG---CAG---AGT---GCC---TTT---GGA---ACGATG---CGTTTAATCGTGACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWAYILYEI-----F--A-GEAGKASAA--N-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926715 [IV-Proteo4-d] PRGD_OTU002a_fa74806820bd3f28263f85028f96df81 gb|KJ926715| PRGD_OTU002a_fa74806820bd3f28263f85028f96df81, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_fa74806820bd3f28263f85028f96df81, putative proteorhodopsin gene, partial cds. KJ926715 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACTGTACCGCTGCAAATGGTTGAATTCTACTTCATCCTTGCTGCTGTTACGGCGGTCAGTGCTGGCATCTTCTGGCGCTTGCTGATTGGATCGCTCGTAATGTTGGTGGCGGGTTACGCTGGTGAAGCTGGGCTGATAAACGCCTGGGCTGGCTTTATTGTAGGATTGGCTGGCTGGGCTTACATTCTGTACGAAATCTTTGCTGGTGAGGCAGGCAAAGCTTCTGCTGAAAAAGCTCCAGCATCTGTGCAGAGTGCCTTCGGAACAATGCGGTTGATCGTAACGGTT LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTACCGCTGCAAATGGTTGAATTCTACTTCATCCTTGCTGCT---------GTT---ACGGCGGTCAGTGCT---GGCATC------------------------------------TTCTGGCGC---TTGCTGATTGGATCGCTCGTAATGTTGGTGGCGGGTTACGCTGGTGAA---------GCT------------------GGG------CTG---------------------------------ATA------------------------------------------------------------------AACGCC------------------TGGGCTGGC---TTTATTGTAGGATTGGCTGGCTGGGCTTACATTCTGTACGAAATC---------------TTT------GCT---GGTGAGGCAGGCAAAGCTTCTGCTGAA------AAA---GCTCCAGCATCTGTG---CAG---AGT---GCC---TTC---GGA---ACAATG---CGGTTGATCGTAACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926660 [IV-Proteo4-d] PRGD_OTU002a_9c4d7ee5e8ac914649a5d3e42c51b13e gb|KJ926660| PRGD_OTU002a_9c4d7ee5e8ac914649a5d3e42c51b13e, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_9c4d7ee5e8ac914649a5d3e42c51b13e, putative proteorhodopsin gene, partial cds. KJ926660 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATCACCGTGCCGCTGCAAATGGTTGAATTTTACTTCATCCTCGCTGCTGTTACGGCGGTTTGCGCAGGCATCTTCTGGCGTCTGCTTATTGGGTCACTCGTCATGTTGGTCGCAGGCTACGCTGGCGAAGCTGGTCTGATAAACGCATGGGCCGGCTTTATTGTAGGAATGGCTGGATGGTTATACATCTTGTACGAAATCTTTGCCGGTGAGGCGGGCAAAGCTTCTGCTGAAAAAGCCCCAGCATCGGTGCAGAGCGCCTTTGGCACGATGCGGTTAATCGTGACTGTT LITVPLQMVEFYFILAAVTAVCAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGMAGWLYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACCGTGCCGCTGCAAATGGTTGAATTTTACTTCATCCTCGCTGCT---------GTT---ACGGCGGTTTGCGCA---GGCATC------------------------------------TTCTGGCGT---CTGCTTATTGGGTCACTCGTCATGTTGGTCGCAGGCTACGCTGGCGAA---------GCT------------------GGT------CTG---------------------------------ATA------------------------------------------------------------------AACGCA------------------TGGGCCGGC---TTTATTGTAGGAATGGCTGGATGGTTATACATCTTGTACGAAATC---------------TTT------GCC---GGTGAGGCGGGCAAAGCTTCTGCTGAA------AAA---GCCCCAGCATCGGTG---CAG---AGC---GCC---TTT---GGC---ACGATG---CGGTTAATCGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVCA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWLYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926699 [IV-Proteo4-d] PRGD_OTU002a_dfc19de107b259c6ef97259161a11db1 gb|KJ926699| PRGD_OTU002a_dfc19de107b259c6ef97259161a11db1, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_dfc19de107b259c6ef97259161a11db1, putative proteorhodopsin gene, partial cds. KJ926699 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Indian Ocean (-23.5956, 69.0419) TTAATCACCGTGCCGCTGCAAATGGTTGAATTTTACTTCATCCTTGCTGCTGTTACGGCTGTTAGCGCAGGCATCTTCTGGCGGCTGCTTATTGGGTCACTCGTCATGCTGGTCGCAGGCTACGCTGGCGAAGCTGGTCTGATAAACGCATGGGCCGGCTTTATTGTAGGAATGGCTGGATGGTTATACATCTTGTACGAAATCTTTGCCGGTGAGGCGGGCAAAGCTTCTGCTGAAAAAGCCCCAGCATCGGTGCAGAGCGCGTTTGGCACGATGCGGTTAATCGTGACTGTT LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGMAGWLYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACCGTGCCGCTGCAAATGGTTGAATTTTACTTCATCCTTGCTGCT---------GTT---ACGGCTGTTAGCGCA---GGCATC------------------------------------TTCTGGCGG---CTGCTTATTGGGTCACTCGTCATGCTGGTCGCAGGCTACGCTGGCGAA---------GCT------------------GGT------CTG---------------------------------ATA------------------------------------------------------------------AACGCA------------------TGGGCCGGC---TTTATTGTAGGAATGGCTGGATGGTTATACATCTTGTACGAAATC---------------TTT------GCC---GGTGAGGCGGGCAAAGCTTCTGCTGAA------AAA---GCCCCAGCATCGGTG---CAG---AGC---GCG---TTT---GGC---ACGATG---CGGTTAATCGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWLYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926669 [IV-Proteo4-d] PRGD_OTU002a_a8d53db0d2fdd4ad73a3729b6a284b20 gb|KJ926669| PRGD_OTU002a_a8d53db0d2fdd4ad73a3729b6a284b20, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_a8d53db0d2fdd4ad73a3729b6a284b20, putative proteorhodopsin gene, partial cds. KJ926669 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) TTAATCACCGTGCCGCTGCAAATGGTTGAATTTTACTTCATCCTCGCTGCTGTTACGGCGGTCAGCGCAGGCATCTTCTGGCGGCTGCTTATTGGCTCACTTGTAATGTTGGTCGCAGGCTATGCTGGTGAAGCTGGTCTGATAAACGCATGGGCCGGCTTTATAGTAGGAATGGCTGGATGGTTATACATCTTGTACGAAATCTTTGCCGGTGAGGCGGGCAAAGCTTCTGCTGAAAAAGCTCCAGCATCGGTGCAGAGCGCCTTTGGCACGATGCGGTTAATCGTGACTGTT LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGMAGWLYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACCGTGCCGCTGCAAATGGTTGAATTTTACTTCATCCTCGCTGCT---------GTT---ACGGCGGTCAGCGCA---GGCATC------------------------------------TTCTGGCGG---CTGCTTATTGGCTCACTTGTAATGTTGGTCGCAGGCTATGCTGGTGAA---------GCT------------------GGT------CTG---------------------------------ATA------------------------------------------------------------------AACGCA------------------TGGGCCGGC---TTTATAGTAGGAATGGCTGGATGGTTATACATCTTGTACGAAATC---------------TTT------GCC---GGTGAGGCGGGCAAAGCTTCTGCTGAA------AAA---GCTCCAGCATCGGTG---CAG---AGC---GCC---TTT---GGC---ACGATG---CGGTTAATCGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWLYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926590 [IV-Proteo4-d] PRGD_OTU002a_0994a2c2490cbdc7cdd554a9f8ad9c7c gb|KJ926590| PRGD_OTU002a_0994a2c2490cbdc7cdd554a9f8ad9c7c, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_0994a2c2490cbdc7cdd554a9f8ad9c7c, putative proteorhodopsin gene, partial cds. KJ926590 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATCACCGTGCCGCTGCAAATGGTTGAATTTTACTTCATCCTTGCTGCTGTTACGGCGGTCAGCGCAGGTATCTTCTGGCGGCTGCTTATTGGCTCACTTGTAATGTTGGTCGCAGGCTATGCTGGTGAAGCTGGTCTGATAAACGCATGGGCCGGCTTTATTGTAGGAATGGCTGGATGGTTATACATCTTGTACGAAATCTTTGCCGGTGAGGCGGGCAAAGCTTCTGCTGAAAAAGCTCCAGCATCGGTGCAGAGCGCCTTTGGCACGATGCGGTTAATCGTGACTGTT LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGMAGWLYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACCGTGCCGCTGCAAATGGTTGAATTTTACTTCATCCTTGCTGCT---------GTT---ACGGCGGTCAGCGCA---GGTATC------------------------------------TTCTGGCGG---CTGCTTATTGGCTCACTTGTAATGTTGGTCGCAGGCTATGCTGGTGAA---------GCT------------------GGT------CTG---------------------------------ATA------------------------------------------------------------------AACGCA------------------TGGGCCGGC---TTTATTGTAGGAATGGCTGGATGGTTATACATCTTGTACGAAATC---------------TTT------GCC---GGTGAGGCGGGCAAAGCTTCTGCTGAA------AAA---GCTCCAGCATCGGTG---CAG---AGC---GCC---TTT---GGC---ACGATG---CGGTTAATCGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWLYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926587 [IV-Proteo4-d] PRGD_OTU002a_otuREP_dc8985203f6bc9167026e1d21fbe1516 gb|KJ926587| PRGD_OTU002a_otuREP_dc8985203f6bc9167026e1d21fbe1516, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_otuREP_dc8985203f6bc9167026e1d21fbe1516, putative proteorhodopsin gene, partial cds. KJ926587 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTAATCACCGTGCCGCTGCAAATGGTTGAATTTTACTTCATCCTTGCTGCTGTTACGGCGGTCAGCGCAGGCATCTTCTGGCGGCTGCTTATTGGGTCACTTGTAATGTTGGTCGCAGGCTACGCTGGTGAAGCTGGTCTGATAAACGCATGGGCCGGCTTTATTGTAGGAATGGCTGGATGGTTGTACATCTTGTACGAAATCTTTGCCGGTGAGGCGGGCAAAGCTTCTGCTGAAAAAGCCCCAGCATCGGTGCAGAGCGCCTTTGGCACGATGCGGTTAATTGTGACTGTT LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGMAGWLYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACCGTGCCGCTGCAAATGGTTGAATTTTACTTCATCCTTGCTGCT---------GTT---ACGGCGGTCAGCGCA---GGCATC------------------------------------TTCTGGCGG---CTGCTTATTGGGTCACTTGTAATGTTGGTCGCAGGCTACGCTGGTGAA---------GCT------------------GGT------CTG---------------------------------ATA------------------------------------------------------------------AACGCA------------------TGGGCCGGC---TTTATTGTAGGAATGGCTGGATGGTTGTACATCTTGTACGAAATC---------------TTT------GCC---GGTGAGGCGGGCAAAGCTTCTGCTGAA------AAA---GCCCCAGCATCGGTG---CAG---AGC---GCC---TTT---GGC---ACGATG---CGGTTAATTGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWLYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926592 [IV-Proteo4-d] PRGD_OTU002a_0b784c2040e8fde83489bb7e41255160 gb|KJ926592| PRGD_OTU002a_0b784c2040e8fde83489bb7e41255160, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_0b784c2040e8fde83489bb7e41255160, putative proteorhodopsin gene, partial cds. KJ926592 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (72.0542, -130.8781), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTGATCACAGTGCCGCTGCAGATGGTTGAATTCTACTTCATCCTGGCAGCAGTTACCGCCGTCAGCGCGGGTATCTTCTGGCGGCTTCTCATCGGATCGCTCGTGATGCTAGTCGCCGGCTACGCTGGTGAGGCAGGCCTGATTAACGCCTGGGCCGGATTTATTGTAGGAATGGCCGGCTGGCTATACATCCTGTATGAGATCTTTGCAGGTGAGGCGGGCAAAGCTTCTGCTGAAAAAGCCCCAGCATCAGTGCAGAGTGCCTTTGGAACGATGCGGTTAATCGTTACGGTT LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGMAGWLYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCGCTGCAGATGGTTGAATTCTACTTCATCCTGGCAGCA---------GTT---ACCGCCGTCAGCGCG---GGTATC------------------------------------TTCTGGCGG---CTTCTCATCGGATCGCTCGTGATGCTAGTCGCCGGCTACGCTGGTGAG---------GCA------------------GGC------CTG---------------------------------ATT------------------------------------------------------------------AACGCC------------------TGGGCCGGA---TTTATTGTAGGAATGGCCGGCTGGCTATACATCCTGTATGAGATC---------------TTT------GCA---GGTGAGGCGGGCAAAGCTTCTGCTGAA------AAA---GCCCCAGCATCAGTG---CAG---AGT---GCC---TTT---GGA---ACGATG---CGGTTAATCGTTACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWLYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926642 [IV-Proteo4-d] PRGD_OTU002a_7857fa0817749b89f750cdbed1e5db7f gb|KJ926642| PRGD_OTU002a_7857fa0817749b89f750cdbed1e5db7f, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_7857fa0817749b89f750cdbed1e5db7f, putative proteorhodopsin gene, partial cds. KJ926642 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATCACTGTGCCGCTGCAGATGGTAGAATTCTACTTCATCCTGGCAGCAGTCACCGCCGTAAGCGCGGGTATCTTCTGGCGGCTTCTCATCGGATCACTCGTGATGCTGGTCGCTGGCTACGCTGGTGAGGCAGGCCTGATTAACGCTTGGGCCGGATTTATCGTCGGAATGGCCGGTTGGCTATACATCCTGTACGAGATCTTTGCAGGTGAGGCGGGCAAAGCTTCTGCTGAAAAAGCCCCAGCATCAGTGCAGAGTGCCTTTGGAACGATGCGGTTAATCGTTACGGTT LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGMAGWLYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCGCTGCAGATGGTAGAATTCTACTTCATCCTGGCAGCA---------GTC---ACCGCCGTAAGCGCG---GGTATC------------------------------------TTCTGGCGG---CTTCTCATCGGATCACTCGTGATGCTGGTCGCTGGCTACGCTGGTGAG---------GCA------------------GGC------CTG---------------------------------ATT------------------------------------------------------------------AACGCT------------------TGGGCCGGA---TTTATCGTCGGAATGGCCGGTTGGCTATACATCCTGTACGAGATC---------------TTT------GCA---GGTGAGGCGGGCAAAGCTTCTGCTGAA------AAA---GCCCCAGCATCAGTG---CAG---AGT---GCC---TTT---GGA---ACGATG---CGGTTAATCGTTACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWLYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926685 [IV-Proteo4-d] PRGD_OTU002a_c884ea6ca6fc373f87824fbda10c6686 gb|KJ926685| PRGD_OTU002a_c884ea6ca6fc373f87824fbda10c6686, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_c884ea6ca6fc373f87824fbda10c6686, putative proteorhodopsin gene, partial cds. KJ926685 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATCACTGTGCCGCTGCAGATGGTTGAATTTTATTTCATCCTGGCAGCAGTTACCGCCGTCAGCGCGGGTATCTTCTGGCGGCTTCTCATAGGATCGCTTGTTATGTTGGTGGCCGGCTACGCTGGTGAGGCAGGCTTGATTAACGCCTGGGCCGGATTTATCGTAGGTATGGCCGGTTGGATATACATCCTTTATGAGATCTTTGCAGGTGAGGCGGGCAAAGCTTCTGCTGAAAAAGCCCCAGCATCAGTGCAGAGTGCCTTTGGAACGATGCGGTTAATCGTTACGGTT LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGMAGWIYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCGCTGCAGATGGTTGAATTTTATTTCATCCTGGCAGCA---------GTT---ACCGCCGTCAGCGCG---GGTATC------------------------------------TTCTGGCGG---CTTCTCATAGGATCGCTTGTTATGTTGGTGGCCGGCTACGCTGGTGAG---------GCA------------------GGC------TTG---------------------------------ATT------------------------------------------------------------------AACGCC------------------TGGGCCGGA---TTTATCGTAGGTATGGCCGGTTGGATATACATCCTTTATGAGATC---------------TTT------GCA---GGTGAGGCGGGCAAAGCTTCTGCTGAA------AAA---GCCCCAGCATCAGTG---CAG---AGT---GCC---TTT---GGA---ACGATG---CGGTTAATCGTTACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWIYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926610 [IV-Proteo4-d] PRGD_OTU002a_384101932edfc4a80f6937385444c0f2 gb|KJ926610| PRGD_OTU002a_384101932edfc4a80f6937385444c0f2, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_384101932edfc4a80f6937385444c0f2, putative proteorhodopsin gene, partial cds. KJ926610 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATCACTGTGCCGCTGCAGATGGTTGAGTTCTACTTCATCCTGGCAGCAGTTACCGCCGTAAGTGCAGGTATATTCTGGCGGCTTCTCATCGGTTCACTTGTGATGTTGGTCGCCGGCTACGCTGGTGAGGCAGGCCTTATCAACGCCTGGGCCGGATTTATTGTGGGAATGGCTGGCTGGATATACATCCTCTATGAGATCTTTGCAGGTGAGGCGGGCAAAGCTTCTGCTGAAAAAGCCCCAGCATCAGTGCAGAGTGCCTTCGGAACGATGCGGTTAATCGTTACGGTT LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGMAGWIYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCGCTGCAGATGGTTGAGTTCTACTTCATCCTGGCAGCA---------GTT---ACCGCCGTAAGTGCA---GGTATA------------------------------------TTCTGGCGG---CTTCTCATCGGTTCACTTGTGATGTTGGTCGCCGGCTACGCTGGTGAG---------GCA------------------GGC------CTT---------------------------------ATC------------------------------------------------------------------AACGCC------------------TGGGCCGGA---TTTATTGTGGGAATGGCTGGCTGGATATACATCCTCTATGAGATC---------------TTT------GCA---GGTGAGGCGGGCAAAGCTTCTGCTGAA------AAA---GCCCCAGCATCAGTG---CAG---AGT---GCC---TTC---GGA---ACGATG---CGGTTAATCGTTACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWIYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926649 [IV-Proteo4-d] PRGD_OTU002a_86d5d63e9bae8e3f9a43f8466088dbad gb|KJ926649| PRGD_OTU002a_86d5d63e9bae8e3f9a43f8466088dbad, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_86d5d63e9bae8e3f9a43f8466088dbad, putative proteorhodopsin gene, partial cds. KJ926649 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTGATCACTGTGCCGCTGCAGATGGTTGAATTCTACTTCATCCTGGCAGCAGTTACCGCCGTCAGTGCGGGTATCTTCTGGCGGCTTCTCATCGGATCGCTTGTGATGTTAGTTGCTGGCTACGCTGGCGAGGCAGGCCTGATTAACGCCTGGGCCGGATTTATTGTGGGAATGGCTGGCTGGCTATACATCCTGTATGAAATCTTTGCGGGTGAGGCTGGCAAAGCTTCTGCTGAAAAAGCCCCAGCATCAGTACAGAGTGCCTTTGGAACGATGCGGTTAATCGTAACAGTT LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGMAGWLYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCGCTGCAGATGGTTGAATTCTACTTCATCCTGGCAGCA---------GTT---ACCGCCGTCAGTGCG---GGTATC------------------------------------TTCTGGCGG---CTTCTCATCGGATCGCTTGTGATGTTAGTTGCTGGCTACGCTGGCGAG---------GCA------------------GGC------CTG---------------------------------ATT------------------------------------------------------------------AACGCC------------------TGGGCCGGA---TTTATTGTGGGAATGGCTGGCTGGCTATACATCCTGTATGAAATC---------------TTT------GCG---GGTGAGGCTGGCAAAGCTTCTGCTGAA------AAA---GCCCCAGCATCAGTA---CAG---AGT---GCC---TTT---GGA---ACGATG---CGGTTAATCGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWLYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926702 [IV-Proteo4-d] PRGD_OTU002a_e66b3c569bb2cb494eff70aa16c6e828 gb|KJ926702| PRGD_OTU002a_e66b3c569bb2cb494eff70aa16c6e828, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_e66b3c569bb2cb494eff70aa16c6e828, putative proteorhodopsin gene, partial cds. KJ926702 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) TTGATCACTGTGCCGCTGCAGATGGTTGAATTCTACTTCATCCTGGCAGCAGTTACCGCCGTTAGTGCGGGCATCTTCTGGCGACTTCTCATCGGATCGCTTGTTATGTTAGTCGCCGGCTACGCTGGTGAGGCAGGCCTGATTAACGCCTGGGCAGGATTTATTGTAGGAATGGCTGGCTGGCTATACATCCTGTATGAGATCTTTGCAGGTGAGGCGGGCAAAGCTTCAGCTGAAAAAGCCCCGGCATCAGTGCAGAGTGCCTTTGGAACGATGCGGTTAATCGTTACGGTT LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGMAGWLYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCGCTGCAGATGGTTGAATTCTACTTCATCCTGGCAGCA---------GTT---ACCGCCGTTAGTGCG---GGCATC------------------------------------TTCTGGCGA---CTTCTCATCGGATCGCTTGTTATGTTAGTCGCCGGCTACGCTGGTGAG---------GCA------------------GGC------CTG---------------------------------ATT------------------------------------------------------------------AACGCC------------------TGGGCAGGA---TTTATTGTAGGAATGGCTGGCTGGCTATACATCCTGTATGAGATC---------------TTT------GCA---GGTGAGGCGGGCAAAGCTTCAGCTGAA------AAA---GCCCCGGCATCAGTG---CAG---AGT---GCC---TTT---GGA---ACGATG---CGGTTAATCGTTACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWLYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926601 [IV-Proteo4-d] PRGD_OTU002a_230f386bf6b832c48e5d5bc3f5e4fae4 gb|KJ926601| PRGD_OTU002a_230f386bf6b832c48e5d5bc3f5e4fae4, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_230f386bf6b832c48e5d5bc3f5e4fae4, putative proteorhodopsin gene, partial cds. KJ926601 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTGATCACTGTGCCGCTTCAAATGGTTGAATTCTACTTCATCCTGGCAGCAGTTACGGCCGTCAGCGCGGGTATTTTCTGGCGACTGCTCATCGGATCACTGGTGATGTTGGTCGCCGGCTACGCTGGTGAGGCTGGCTTGATTAACGCCTGGGCCGGATTTATTGTGGGAATGGCTGGCTGGATATACATCCTGTATGAAATCTTTGCCGGTGAGGCGGGTAAAGCGTCCGCTGAAAAAGCTCCTGCATCGGTGCAGAGCGCCTTTGGAACGATGCGTTTAATCGTGACAGTC LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGMAGWIYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCGCTTCAAATGGTTGAATTCTACTTCATCCTGGCAGCA---------GTT---ACGGCCGTCAGCGCG---GGTATT------------------------------------TTCTGGCGA---CTGCTCATCGGATCACTGGTGATGTTGGTCGCCGGCTACGCTGGTGAG---------GCT------------------GGC------TTG---------------------------------ATT------------------------------------------------------------------AACGCC------------------TGGGCCGGA---TTTATTGTGGGAATGGCTGGCTGGATATACATCCTGTATGAAATC---------------TTT------GCC---GGTGAGGCGGGTAAAGCGTCCGCTGAA------AAA---GCTCCTGCATCGGTG---CAG---AGC---GCC---TTT---GGA---ACGATG---CGTTTAATCGTGACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWIYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926625 [IV-Proteo4-d] PRGD_OTU002a_52b0be933ca3066d6ee2c1f8c585551a gb|KJ926625| PRGD_OTU002a_52b0be933ca3066d6ee2c1f8c585551a, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_52b0be933ca3066d6ee2c1f8c585551a, putative proteorhodopsin gene, partial cds. KJ926625 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACTGTGCCGCTTCAAATGGTTGAATTCTACTTCATCCTGGCAGCAGTTACGGCCGTCAGCGCGGGTATTTTCTGGCGACTGCTCATCGGATCACTGGTGATGTTGGTCGCCGGCTACGCTGGCGAGGCTGGCCTGATTAACGCTTGGGCCGGATTTATTGTGGGAATGGCTGGCTGGATATACATCCTGTATGAAATCTTTGCCGGTGAGGCGGGTAAAGCGTCCGCTGAAAAAGCTCCTGCATCGGTGCAGAGCGCCTTTGGAACGATGCGTTTAATCGTGACAGTC LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGMAGWIYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCGCTTCAAATGGTTGAATTCTACTTCATCCTGGCAGCA---------GTT---ACGGCCGTCAGCGCG---GGTATT------------------------------------TTCTGGCGA---CTGCTCATCGGATCACTGGTGATGTTGGTCGCCGGCTACGCTGGCGAG---------GCT------------------GGC------CTG---------------------------------ATT------------------------------------------------------------------AACGCT------------------TGGGCCGGA---TTTATTGTGGGAATGGCTGGCTGGATATACATCCTGTATGAAATC---------------TTT------GCC---GGTGAGGCGGGTAAAGCGTCCGCTGAA------AAA---GCTCCTGCATCGGTG---CAG---AGC---GCC---TTT---GGA---ACGATG---CGTTTAATCGTGACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWIYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926672 [IV-Proteo4-d] PRGD_OTU002a_ae802c0f1d7c03f177e26321f73ac8ae gb|KJ926672| PRGD_OTU002a_ae802c0f1d7c03f177e26321f73ac8ae, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_ae802c0f1d7c03f177e26321f73ac8ae, putative proteorhodopsin gene, partial cds. KJ926672 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATTACTGTGCCGCTGCAGATGGTTGAATTCTACTTCATCCTGGCAGCTGTTACCGCCGTCAGCGCGGGCATCTTCTGGCGGCTTCTCATCGGGTCACTTGTGATGTTGGTCGCCGGCTATGCTGGTGAGGCAGGCCTGATTAACGCCTGGGCCGGATTCATTGTAGGAATGGCTGGCTGGCTATATATCCTGTACGAGATCTTTGCAGGTGAGGCGGGTAAAGCTTCTGCTGAAAAAGCTCCAGCATCAGTGCAGAGTGCCTTTGGAACGATGCGGTTAATCGTTACTGTC LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGMAGWLYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTGCCGCTGCAGATGGTTGAATTCTACTTCATCCTGGCAGCT---------GTT---ACCGCCGTCAGCGCG---GGCATC------------------------------------TTCTGGCGG---CTTCTCATCGGGTCACTTGTGATGTTGGTCGCCGGCTATGCTGGTGAG---------GCA------------------GGC------CTG---------------------------------ATT------------------------------------------------------------------AACGCC------------------TGGGCCGGA---TTCATTGTAGGAATGGCTGGCTGGCTATATATCCTGTACGAGATC---------------TTT------GCA---GGTGAGGCGGGTAAAGCTTCTGCTGAA------AAA---GCTCCAGCATCAGTG---CAG---AGT---GCC---TTT---GGA---ACGATG---CGGTTAATCGTTACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWLYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-d]_KJ926656 [IV-Proteo4-d] PRGD_OTU002a_8eca6810ee1c24fef2814eff9f251dc0 gb|KJ926656| PRGD_OTU002a_8eca6810ee1c24fef2814eff9f251dc0, putative proteorhodopsin gene, partial cds. PRGD_OTU002a_8eca6810ee1c24fef2814eff9f251dc0, putative proteorhodopsin gene, partial cds. KJ926656 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/D subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACTGTGCCGCTCCAGATGGTTGAATTCTACTTCATCCTTGCAGCAGTTACCGCCGTCAGCGCTGGTATCTTCTGGCGACTTCTCATTGGATCACTTGTGATGTTAGTCGCCGGCTACGCTGGTGAGGCAGGCCTGATTAACGCTTGGGCCGGATTTATTGTAGGAATGGCTGGCTGGCTATACATCCTGTATGAGATCTTTGCAGGTGAGGCGGGGAAAGCTTCTGCTGAAAAAGCCCCAGCATCAGTGCAAAGCGCCTTTGGAACGATGCGGTTAATCGTAACGGTT LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYAGEAGLINAWAGFIVGMAGWLYILYEIFAGEAGKASAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCGCTCCAGATGGTTGAATTCTACTTCATCCTTGCAGCA---------GTT---ACCGCCGTCAGCGCT---GGTATC------------------------------------TTCTGGCGA---CTTCTCATTGGATCACTTGTGATGTTAGTCGCCGGCTACGCTGGTGAG---------GCA------------------GGC------CTG---------------------------------ATT------------------------------------------------------------------AACGCT------------------TGGGCCGGA---TTTATTGTAGGAATGGCTGGCTGGCTATACATCCTGTATGAGATC---------------TTT------GCA---GGTGAGGCGGGGAAAGCTTCTGCTGAA------AAA---GCCCCAGCATCAGTG---CAA---AGC---GCC---TTT---GGA---ACGATG---CGGTTAATCGTAACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------I----------------------NA------WAG-FIVGMAGWLYILYEI-----F--A-GEAGKASAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927246 [IV-Proteo4-BAC17H08] PRGD_OTU007_008bbe3f8bcecbc8c7ff5b8296641d87 gb|KJ927246| PRGD_OTU007_008bbe3f8bcecbc8c7ff5b8296641d87, putative proteorhodopsin gene, partial cds. PRGD_OTU007_008bbe3f8bcecbc8c7ff5b8296641d87, putative proteorhodopsin gene, partial cds. KJ927246 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Atlantic side (76.3333, 14.8833), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCGGTGGCTGTCGTCAGCGCTGGTATCTTCTGGCGCCTGATGATCGGTTCTCTAGTGATGCTGGTTGCTGGTTACCTCGGCGAAGCAGGCCTTGTTAATGCATGGCTCGGCTTTGTTGTTGGAATGGCTGGATGGGCATACATCCTTTATGAGATCTTCGCTGGCGAAGCCGGCAAGGTTTCAGCGGAGTCCGCTCCGGAAGCTGTCCAGAAGTCGTTCGGCACGATGCGTATGATCGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCG---------GTG---GCTGTCGTCAGCGCT---GGTATC------------------------------------TTCTGGCGC---CTGATGATCGGTTCTCTAGTGATGCTGGTTGCTGGTTACCTCGGCGAA---------GCA------------------GGC------CTT---------------------------------GTT------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTTGTTGGAATGGCTGGATGGGCATACATCCTTTATGAGATC---------------TTC------GCT---GGCGAAGCCGGCAAGGTTTCAGCGGAG------TCC---GCTCCGGAAGCTGTC---CAG---AAG---TCG---TTC---GGC---ACGATG---CGTATGATCGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927252 [IV-Proteo4-BAC17H08] PRGD_OTU007_0d6cfd1f9dfb2b07437369a667b2db02 gb|KJ927252| PRGD_OTU007_0d6cfd1f9dfb2b07437369a667b2db02, putative proteorhodopsin gene, partial cds. PRGD_OTU007_0d6cfd1f9dfb2b07437369a667b2db02, putative proteorhodopsin gene, partial cds. KJ927252 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCGGTGGCCGTCGTCAGCGCTGGTATCTTCTGGCGCCTGATGATCGGTTCTCTAGTGATGCTGGTTGCTGGTTACCTCGGCGAAGCAGGCCTTGTTAATGCATGGCTCGGCTTTGTTGTTGGAATGGCTGGATGGGCATACATCCTTTATGAGATCTTTGCTGGCGAAGCCGGCAAGGTTTCAGCGGAGTCCGCTCCGGAAGCTGTCCAGAAGTCGTTCGGCACGATGCGTATGATCGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCG---------GTG---GCCGTCGTCAGCGCT---GGTATC------------------------------------TTCTGGCGC---CTGATGATCGGTTCTCTAGTGATGCTGGTTGCTGGTTACCTCGGCGAA---------GCA------------------GGC------CTT---------------------------------GTT------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTTGTTGGAATGGCTGGATGGGCATACATCCTTTATGAGATC---------------TTT------GCT---GGCGAAGCCGGCAAGGTTTCAGCGGAG------TCC---GCTCCGGAAGCTGTC---CAG---AAG---TCG---TTC---GGC---ACGATG---CGTATGATCGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927295 [IV-Proteo4-BAC17H08] PRGD_OTU007_c1e9f5848e3683ea701d88ce75fe9f36 gb|KJ927295| PRGD_OTU007_c1e9f5848e3683ea701d88ce75fe9f36, putative proteorhodopsin gene, partial cds. PRGD_OTU007_c1e9f5848e3683ea701d88ce75fe9f36, putative proteorhodopsin gene, partial cds. KJ927295 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCGGTGGCTGTCGTCAGCGCTGGTATCTTCTGGCGGCTAATGATCGGTTCTCTAGTGATGCTGGTTGCTGGTTACCTCGGCGAAGCAGGCCTTGTTAATGCATGGCTCGGCTTTGTTGTTGGAATGGCTGGATGGGCATACATCCTTTATGAGATCTTCGCTGGCGAAGCCGGCAAGGTTTCAGCGGAGTCCGCTCCGGAAGCTGTCCAGAAGTCGTTCGGCACGATGCGTATGATCGTGACCGTT LITVPLQMVEFYFILAAVAVVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCG---------GTG---GCTGTCGTCAGCGCT---GGTATC------------------------------------TTCTGGCGG---CTAATGATCGGTTCTCTAGTGATGCTGGTTGCTGGTTACCTCGGCGAA---------GCA------------------GGC------CTT---------------------------------GTT------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTTGTTGGAATGGCTGGATGGGCATACATCCTTTATGAGATC---------------TTC------GCT---GGCGAAGCCGGCAAGGTTTCAGCGGAG------TCC---GCTCCGGAAGCTGTC---CAG---AAG---TCG---TTC---GGC---ACGATG---CGTATGATCGTGACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927253 [IV-Proteo4-BAC17H08] PRGD_OTU007_0ead392e4829ec22f9becee3bdeca456 gb|KJ927253| PRGD_OTU007_0ead392e4829ec22f9becee3bdeca456, putative proteorhodopsin gene, partial cds. PRGD_OTU007_0ead392e4829ec22f9becee3bdeca456, putative proteorhodopsin gene, partial cds. KJ927253 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTGATTACGGTTCCGCTCCAGATGGTAGAATTCTACTTTATTCTGGCGGCAGTGGCTGTCGTCAGCGCTGGTATCTTCTGGCGCCTGATGATCGGTTCTCTAGTGATGCTGGTTGCTGGATACCTCGGCGAAGCAGGCCTTGTTAATGCATGGCTCGGCTTTGTTGTTGGCATGGCTGGATGGGCATACATCCTTTATGAGATCTTCGCTGGCGAAGCCGGCAAGGTTTCAGCGGAGTCTGCTCCGGAAGCTGTCCAGAAGTCGTTCGGCACGATGCGTATGATCGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACGGTTCCGCTCCAGATGGTAGAATTCTACTTTATTCTGGCGGCA---------GTG---GCTGTCGTCAGCGCT---GGTATC------------------------------------TTCTGGCGC---CTGATGATCGGTTCTCTAGTGATGCTGGTTGCTGGATACCTCGGCGAA---------GCA------------------GGC------CTT---------------------------------GTT------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTTGTTGGCATGGCTGGATGGGCATACATCCTTTATGAGATC---------------TTC------GCT---GGCGAAGCCGGCAAGGTTTCAGCGGAG------TCT---GCTCCGGAAGCTGTC---CAG---AAG---TCG---TTC---GGC---ACGATG---CGTATGATCGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927271 [IV-Proteo4-BAC17H08] PRGD_OTU007_570223c08b0cb95ff88000f13bd637bb gb|KJ927271| PRGD_OTU007_570223c08b0cb95ff88000f13bd637bb, putative proteorhodopsin gene, partial cds. PRGD_OTU007_570223c08b0cb95ff88000f13bd637bb, putative proteorhodopsin gene, partial cds. KJ927271 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTGATTACGGTTCCGCTCCAGATGGTAGAATTCTACTTCATTCTGGCGGCAGTGGCTGTCGTCAGCGCTGGTATCTTCTGGCGCCTGATGATCGGTTCTCTAGTGATGCTGGTGGCTGGTTACCTCGGCGAAGCAGGCCTTGTTAATGCATGGCTCGGCTTTGTTGTTGGCATGGCTGGATGGGCATACATCCTTTATGAGATCTTCGCTGGCGAAGCCGGCAAGGTTTCAGCGGAGTCCGCTCCGGAAGCTGTCCAGAAGTCGTTCGGCACGATGCGTATGATCGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACGGTTCCGCTCCAGATGGTAGAATTCTACTTCATTCTGGCGGCA---------GTG---GCTGTCGTCAGCGCT---GGTATC------------------------------------TTCTGGCGC---CTGATGATCGGTTCTCTAGTGATGCTGGTGGCTGGTTACCTCGGCGAA---------GCA------------------GGC------CTT---------------------------------GTT------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTTGTTGGCATGGCTGGATGGGCATACATCCTTTATGAGATC---------------TTC------GCT---GGCGAAGCCGGCAAGGTTTCAGCGGAG------TCC---GCTCCGGAAGCTGTC---CAG---AAG---TCG---TTC---GGC---ACGATG---CGTATGATCGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927269 [IV-Proteo4-BAC17H08] PRGD_OTU007_49ceba7eb9271e3a2edab4579a96621b gb|KJ927269| PRGD_OTU007_49ceba7eb9271e3a2edab4579a96621b, putative proteorhodopsin gene, partial cds. PRGD_OTU007_49ceba7eb9271e3a2edab4579a96621b, putative proteorhodopsin gene, partial cds. KJ927269 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATTCTGGCGGCAGTGGCTGTCGTCAGCGCTGGTATCTTCTGGCGCCTGATGATCGGTTCTCTAGTGATGCTGGTTGCTGGTTATCTCGGCGAAGCAGGCCTTGTTAATGCATGGCTCGGCTTTGTTGTTGGCATGGCTGGATGGGCATACATCCTTTATGAGATCTTTGCTGGTGAAGCCGGCAAGGTTTCAGCGGAGTCCGCTCCGGAAGCTGTCCAGAAGTCATTCGGCACGATGCGTATGATCGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATTCTGGCGGCA---------GTG---GCTGTCGTCAGCGCT---GGTATC------------------------------------TTCTGGCGC---CTGATGATCGGTTCTCTAGTGATGCTGGTTGCTGGTTATCTCGGCGAA---------GCA------------------GGC------CTT---------------------------------GTT------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTTGTTGGCATGGCTGGATGGGCATACATCCTTTATGAGATC---------------TTT------GCT---GGTGAAGCCGGCAAGGTTTCAGCGGAG------TCC---GCTCCGGAAGCTGTC---CAG---AAG---TCA---TTC---GGC---ACGATG---CGTATGATCGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927282 [IV-Proteo4-BAC17H08] PRGD_OTU007_8d837054c7c9326ffdbf1b960f5b9d16 gb|KJ927282| PRGD_OTU007_8d837054c7c9326ffdbf1b960f5b9d16, putative proteorhodopsin gene, partial cds. PRGD_OTU007_8d837054c7c9326ffdbf1b960f5b9d16, putative proteorhodopsin gene, partial cds. KJ927282 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Mediterranean Sea (38.6308, 7.9097) CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCAGTGGCTGTCGTCAGCGCTGGTATCTTCTGGCGCCTGATGATCGGTTCTCTAGTGATGCTGGTTGCCGGTTACCTTGGCGAAGCAGGCCTTGTTAATGCATGGCTCGGCTTTGTTGTTGGCATGGCTGGATGGGCATACATCCTCTACGAAATCTTCGCTGGCGAAGCCGGCAAGGTTTCAGCGGAGTCTGCTCCGGAAGCTGTCCAGAAGTCGTTCGGCACGATGCGTATGATCGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCA---------GTG---GCTGTCGTCAGCGCT---GGTATC------------------------------------TTCTGGCGC---CTGATGATCGGTTCTCTAGTGATGCTGGTTGCCGGTTACCTTGGCGAA---------GCA------------------GGC------CTT---------------------------------GTT------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTTGTTGGCATGGCTGGATGGGCATACATCCTCTACGAAATC---------------TTC------GCT---GGCGAAGCCGGCAAGGTTTCAGCGGAG------TCT---GCTCCGGAAGCTGTC---CAG---AAG---TCG---TTC---GGC---ACGATG---CGTATGATCGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927292 [IV-Proteo4-BAC17H08] PRGD_OTU007_b5d82caf2cd59fa8e32365ab9a191e21 gb|KJ927292| PRGD_OTU007_b5d82caf2cd59fa8e32365ab9a191e21, putative proteorhodopsin gene, partial cds. PRGD_OTU007_b5d82caf2cd59fa8e32365ab9a191e21, putative proteorhodopsin gene, partial cds. KJ927292 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCAGTGGCTGTCGTCAGCGCTGGTATCTTCTGGCGCCTGATGATCGGTTCTCTAGTGATGCTGGTTGCCGGTTACCTCGGCGAAGCAGGCCTTGTTAATGCATGGCTCGGCTTTGTTGTTGGCATGGCTGGATGGGCATACATCCTTTACGAAATCTTCGCTGGCGAAGCCGGCAAGGTTTCAGCGGAGTCCGCTCCGGAAGCTGTCCAGAAGTCGTTTGGCACGATGCGTATGATCGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCA---------GTG---GCTGTCGTCAGCGCT---GGTATC------------------------------------TTCTGGCGC---CTGATGATCGGTTCTCTAGTGATGCTGGTTGCCGGTTACCTCGGCGAA---------GCA------------------GGC------CTT---------------------------------GTT------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTTGTTGGCATGGCTGGATGGGCATACATCCTTTACGAAATC---------------TTC------GCT---GGCGAAGCCGGCAAGGTTTCAGCGGAG------TCC---GCTCCGGAAGCTGTC---CAG---AAG---TCG---TTT---GGC---ACGATG---CGTATGATCGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927248 [IV-Proteo4-BAC17H08] PRGD_OTU007_0787087243392f62b26a69989fe474e2 gb|KJ927248| PRGD_OTU007_0787087243392f62b26a69989fe474e2, putative proteorhodopsin gene, partial cds. PRGD_OTU007_0787087243392f62b26a69989fe474e2, putative proteorhodopsin gene, partial cds. KJ927248 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCAGTGGCTGTCGTCAGCGCTGGTATTTTCTGGCGCCTGATGATCGGTTCTCTAGTGATGCTGGTTGCCGGTTACCTCGGCGAAGCAGGCCTTGTTAATGCATGGCTCGGCTTTGTTGTTGGCATGGCTGGATGGGCATACATCCTTTACGAAATCTTCGCTGGCGAAGCCGGCAAGGTTTCAGCGGAGTCCGCTCCGGAAGCTGTCCAGAAATCGTTCGGCACGATGCGCATGATCGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCA---------GTG---GCTGTCGTCAGCGCT---GGTATT------------------------------------TTCTGGCGC---CTGATGATCGGTTCTCTAGTGATGCTGGTTGCCGGTTACCTCGGCGAA---------GCA------------------GGC------CTT---------------------------------GTT------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTTGTTGGCATGGCTGGATGGGCATACATCCTTTACGAAATC---------------TTC------GCT---GGCGAAGCCGGCAAGGTTTCAGCGGAG------TCC---GCTCCGGAAGCTGTC---CAG---AAA---TCG---TTC---GGC---ACGATG---CGCATGATCGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927291 [IV-Proteo4-BAC17H08] PRGD_OTU007_b589685a0ef6c473d2050132bb254b27 gb|KJ927291| PRGD_OTU007_b589685a0ef6c473d2050132bb254b27, putative proteorhodopsin gene, partial cds. PRGD_OTU007_b589685a0ef6c473d2050132bb254b27, putative proteorhodopsin gene, partial cds. KJ927291 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATTACTGTGCCGCTCCAGATGGTAGAATTCTACTTCATCTTGGCGGCAGTGGCTGTCGTCAGCGCTGGTATCTTCTGGCGCCTGATGATCGGTTCTCTAGTGATGCTGGTTGCCGGTTACCTCGGCGAAGCAGGCCTTGTTAATGCATGGCTCGGCTTTGTTGTTGGCATGGCTGGATGGGCATACATCCTTTACGAAATCTTCGCTGGCGAAGCCGGCAAGGTTTCAGCGGAGTCCGCTCCGGAAGCTGTCCAGAAGTCGTTCGGCACGATGCGTATGATCGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCGCTCCAGATGGTAGAATTCTACTTCATCTTGGCGGCA---------GTG---GCTGTCGTCAGCGCT---GGTATC------------------------------------TTCTGGCGC---CTGATGATCGGTTCTCTAGTGATGCTGGTTGCCGGTTACCTCGGCGAA---------GCA------------------GGC------CTT---------------------------------GTT------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTTGTTGGCATGGCTGGATGGGCATACATCCTTTACGAAATC---------------TTC------GCT---GGCGAAGCCGGCAAGGTTTCAGCGGAG------TCC---GCTCCGGAAGCTGTC---CAG---AAG---TCG---TTC---GGC---ACGATG---CGTATGATCGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927267 [IV-Proteo4-BAC17H08] PRGD_OTU007_3dc78600b3c444d2f8610802f972b1c4 gb|KJ927267| PRGD_OTU007_3dc78600b3c444d2f8610802f972b1c4, putative proteorhodopsin gene, partial cds. PRGD_OTU007_3dc78600b3c444d2f8610802f972b1c4, putative proteorhodopsin gene, partial cds. KJ927267 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTAATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCAGTGGCTGTCGTCAGCGCTGGTATCTTCTGGCGCCTGATGATCGGTTCTCTAGTGATGCTGGTTGCCGGTTACCTCGGCGAAGCAGGCCTTGTTAATGCATGGCTCGGCTTTGTTGTTGGCATGGCTGGATGGGCATACATCCTTTATGAGATCTTCGCTGGCGAAGCCGGCAAGGTTTCAGCGGAGTCTGCTCCGGAAGCTGTCCAGAAGTCGTTCGGCACGATGCGTATGATCGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCA---------GTG---GCTGTCGTCAGCGCT---GGTATC------------------------------------TTCTGGCGC---CTGATGATCGGTTCTCTAGTGATGCTGGTTGCCGGTTACCTCGGCGAA---------GCA------------------GGC------CTT---------------------------------GTT------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTTGTTGGCATGGCTGGATGGGCATACATCCTTTATGAGATC---------------TTC------GCT---GGCGAAGCCGGCAAGGTTTCAGCGGAG------TCT---GCTCCGGAAGCTGTC---CAG---AAG---TCG---TTC---GGC---ACGATG---CGTATGATCGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927297 [IV-Proteo4-BAC17H08] PRGD_OTU007_d49149c6d9972a151a00b5383dda629a gb|KJ927297| PRGD_OTU007_d49149c6d9972a151a00b5383dda629a, putative proteorhodopsin gene, partial cds. PRGD_OTU007_d49149c6d9972a151a00b5383dda629a, putative proteorhodopsin gene, partial cds. KJ927297 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCAGTGGCTGTCGTCAGTGCTGGTATTTTCTGGCGCCTAATGATCGGTTCTCTAGTGATGCTGGTTGCCGGTTACCTCGGCGAAGCAGGCCTTGTTAATGCATGGCTCGGCTTTGTTGTTGGCATGGCTGGATGGGCATACATCCTTTATGAAATTTTCGCTGGCGAAGCCGGCAAAGTTTCAGCGGAGTCCGCTCCGGAAGCTGTCCAGAAGTCGTTCGGCACGATGCGTATGATCGTGACAGTC LITVPLQMVEFYFILAAVAVVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCA---------GTG---GCTGTCGTCAGTGCT---GGTATT------------------------------------TTCTGGCGC---CTAATGATCGGTTCTCTAGTGATGCTGGTTGCCGGTTACCTCGGCGAA---------GCA------------------GGC------CTT---------------------------------GTT------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTTGTTGGCATGGCTGGATGGGCATACATCCTTTATGAAATT---------------TTC------GCT---GGCGAAGCCGGCAAAGTTTCAGCGGAG------TCC---GCTCCGGAAGCTGTC---CAG---AAG---TCG---TTC---GGC---ACGATG---CGTATGATCGTGACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927312 [IV-Proteo4-BAC17H08] PRGD_OTU007_fa63068f2329a0e0c89458d8cc0575ef gb|KJ927312| PRGD_OTU007_fa63068f2329a0e0c89458d8cc0575ef, putative proteorhodopsin gene, partial cds. PRGD_OTU007_fa63068f2329a0e0c89458d8cc0575ef, putative proteorhodopsin gene, partial cds. KJ927312 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCAGTGGCTGTCGTCAGCGCTGGTATCTTCTGGCGCCTGATGATCGGTTCTCTAGTGATGCTGGTTGCCGGTTACCTCGGCGAAGCAGGGCTTGTTAATGCATGGCTCGGCTTTGTTGTTGGCATGGCTGGATGGGCATACATCCTTTATGAGATCTTCGCTGGCGAAGCCGGCAAGGTTTCAGCGGAGTCCGCTCCGGAAGCTGTCCAGAAGTCGTTCGGCACTATGCGTATGATCGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCA---------GTG---GCTGTCGTCAGCGCT---GGTATC------------------------------------TTCTGGCGC---CTGATGATCGGTTCTCTAGTGATGCTGGTTGCCGGTTACCTCGGCGAA---------GCA------------------GGG------CTT---------------------------------GTT------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTTGTTGGCATGGCTGGATGGGCATACATCCTTTATGAGATC---------------TTC------GCT---GGCGAAGCCGGCAAGGTTTCAGCGGAG------TCC---GCTCCGGAAGCTGTC---CAG---AAG---TCG---TTC---GGC---ACTATG---CGTATGATCGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927274 [IV-Proteo4-BAC17H08] PRGD_OTU007_758787f4889bc6cf832689321fb769b9 gb|KJ927274| PRGD_OTU007_758787f4889bc6cf832689321fb769b9, putative proteorhodopsin gene, partial cds. PRGD_OTU007_758787f4889bc6cf832689321fb769b9, putative proteorhodopsin gene, partial cds. KJ927274 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCAGTGGCTGTCGTCAGCGCTGGTATCTTCTGGCGCCTGATGATCGGTTCTCTAGTGATGCTGGTGGCCGGTTACCTCGGCGAAGCAGGCCTTGTTAATGCATGGCTCGGCTTTGTTGTTGGAATGGCTGGATGGGCATACATCCTTTATGAGATCTTCGCTGGCGAAGCCGGCAAGGTTTCAGCGGAGTCCGCTCCGGAAGCTGTCCAGAAGTCGTTCGGCACGATGCGTATGATCGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCA---------GTG---GCTGTCGTCAGCGCT---GGTATC------------------------------------TTCTGGCGC---CTGATGATCGGTTCTCTAGTGATGCTGGTGGCCGGTTACCTCGGCGAA---------GCA------------------GGC------CTT---------------------------------GTT------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTTGTTGGAATGGCTGGATGGGCATACATCCTTTATGAGATC---------------TTC------GCT---GGCGAAGCCGGCAAGGTTTCAGCGGAG------TCC---GCTCCGGAAGCTGTC---CAG---AAG---TCG---TTC---GGC---ACGATG---CGTATGATCGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927278 [IV-Proteo4-BAC17H08] PRGD_OTU007_8458581461a7fb4eae7bb9a4625d6a33 gb|KJ927278| PRGD_OTU007_8458581461a7fb4eae7bb9a4625d6a33, putative proteorhodopsin gene, partial cds. PRGD_OTU007_8458581461a7fb4eae7bb9a4625d6a33, putative proteorhodopsin gene, partial cds. KJ927278 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCAGTGGCTGTCGTCAGCGCTGGTATCTTCTGGCGCCTGATGATCGGTTCTCTAGTGATGCTGGTGGCCGGTTACCTCGGCGAAGCAGGTCTTGTTAATGCATGGCTCGGCTTTGTTGTTGGAATGGCTGGATGGGCATACATCCTTTACGAGATCTTCGCTGGCGAAGCCGGCAAGGTTTCAGCGGAGTCCGCTCCGGAAGCTGTCCAGAAGTCGTTCGGCACGATGCGTATGATCGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCA---------GTG---GCTGTCGTCAGCGCT---GGTATC------------------------------------TTCTGGCGC---CTGATGATCGGTTCTCTAGTGATGCTGGTGGCCGGTTACCTCGGCGAA---------GCA------------------GGT------CTT---------------------------------GTT------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTTGTTGGAATGGCTGGATGGGCATACATCCTTTACGAGATC---------------TTC------GCT---GGCGAAGCCGGCAAGGTTTCAGCGGAG------TCC---GCTCCGGAAGCTGTC---CAG---AAG---TCG---TTC---GGC---ACGATG---CGTATGATCGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927300 [IV-Proteo4-BAC17H08] PRGD_OTU007_dd41aaefb19685b44b7d5ceab4ad0b37 gb|KJ927300| PRGD_OTU007_dd41aaefb19685b44b7d5ceab4ad0b37, putative proteorhodopsin gene, partial cds. PRGD_OTU007_dd41aaefb19685b44b7d5ceab4ad0b37, putative proteorhodopsin gene, partial cds. KJ927300 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCTTGGCGGCAGTGGCTGTAGTCAGCGCTGGTATCTTCTGGCGCCTGATGATCGGTTCTCTAGTGATGCTGGTTGCCGGTTACCTCGGCGAAGCGGGCCTTGTTAATGCATGGCTCGGCTTTGTTGTTGGAATGGCTGGATGGGCATACATCCTTTATGAGATCTTCGCTGGCGAAGCCGGCAAGGTTTCAGCGGAGTCCGCTCCGGAAGCTGTCCAGAAGTCGTTCGGCACGATGCGTATGATCGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCTTGGCGGCA---------GTG---GCTGTAGTCAGCGCT---GGTATC------------------------------------TTCTGGCGC---CTGATGATCGGTTCTCTAGTGATGCTGGTTGCCGGTTACCTCGGCGAA---------GCG------------------GGC------CTT---------------------------------GTT------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTTGTTGGAATGGCTGGATGGGCATACATCCTTTATGAGATC---------------TTC------GCT---GGCGAAGCCGGCAAGGTTTCAGCGGAG------TCC---GCTCCGGAAGCTGTC---CAG---AAG---TCG---TTC---GGC---ACGATG---CGTATGATCGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927301 [IV-Proteo4-BAC17H08] PRGD_OTU007_ddfbe0d73fee02800756462248ce6e6f gb|KJ927301| PRGD_OTU007_ddfbe0d73fee02800756462248ce6e6f, putative proteorhodopsin gene, partial cds. PRGD_OTU007_ddfbe0d73fee02800756462248ce6e6f, putative proteorhodopsin gene, partial cds. KJ927301 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCAGTGGCTGTCGTCAGCGCTGGTATCTTCTGGCGCCTGATGATCGGTTCTCTAGTGATGCTGGTTGCCGGTTACCTCGGCGAAGCAGGCCTTGTTAATGCATGGCTTGGCTTTGTTGTTGGAATGGCTGGATGGGCATACATCCTTTATGAGATCTTCGCTGGCGAAGCCGGCAAGGTTTCAGCGGAGTCCGCTCCGGAAGCTGTCCAGAAGTCGTTCGGCACGATGCGTATGATCGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCA---------GTG---GCTGTCGTCAGCGCT---GGTATC------------------------------------TTCTGGCGC---CTGATGATCGGTTCTCTAGTGATGCTGGTTGCCGGTTACCTCGGCGAA---------GCA------------------GGC------CTT---------------------------------GTT------------------------------------------------------------------AATGCA------------------TGGCTTGGC---TTTGTTGTTGGAATGGCTGGATGGGCATACATCCTTTATGAGATC---------------TTC------GCT---GGCGAAGCCGGCAAGGTTTCAGCGGAG------TCC---GCTCCGGAAGCTGTC---CAG---AAG---TCG---TTC---GGC---ACGATG---CGTATGATCGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927249 [IV-Proteo4-BAC17H08] PRGD_OTU007_09148b415913e4350f056134274491c8 gb|KJ927249| PRGD_OTU007_09148b415913e4350f056134274491c8, putative proteorhodopsin gene, partial cds. PRGD_OTU007_09148b415913e4350f056134274491c8, putative proteorhodopsin gene, partial cds. KJ927249 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATTACTGTCCCGCTCCAGATGGTAGAATTCTACTTCATCTTGGCGGCAGTGGCTGTTGTCAGCGCTGGTATCTTCTGGCGCCTGATGATCGGTTCTCTAGTAATGCTGGTTGCCGGTTACCTCGGCGAAGCAGGCCTTGTTAATGCATGGCTCGGCTTTGTTGTTGGCATGGCTGGATGGGCATACATCCTTTACGAGATCTTCGCTGGCGAAGCTGGCAAGGTTTCCGCGGAGTCTGCTCCGGAGGCTGTCCAGAAGTCGTTCGGCACGATGCGTATGATTGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTCCCGCTCCAGATGGTAGAATTCTACTTCATCTTGGCGGCA---------GTG---GCTGTTGTCAGCGCT---GGTATC------------------------------------TTCTGGCGC---CTGATGATCGGTTCTCTAGTAATGCTGGTTGCCGGTTACCTCGGCGAA---------GCA------------------GGC------CTT---------------------------------GTT------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTTGTTGGCATGGCTGGATGGGCATACATCCTTTACGAGATC---------------TTC------GCT---GGCGAAGCTGGCAAGGTTTCCGCGGAG------TCT---GCTCCGGAGGCTGTC---CAG---AAG---TCG---TTC---GGC---ACGATG---CGTATGATTGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927259 [IV-Proteo4-BAC17H08] PRGD_OTU007_18d2b2fd149adfadafc88834a8755faf gb|KJ927259| PRGD_OTU007_18d2b2fd149adfadafc88834a8755faf, putative proteorhodopsin gene, partial cds. PRGD_OTU007_18d2b2fd149adfadafc88834a8755faf, putative proteorhodopsin gene, partial cds. KJ927259 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637) CTAATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCTTGGCGGCAGTGGCTGTTGTCAGCGCTGGTATCTTCTGGCGCCTGATGATCGGTTCTCTAGTGATGCTGGTTGCCGGTTACCTCGGCGAAGCAGGCCTTGTTAATGCATGGCTCGGCTTTGTTGTTGGCATGGCTGGATGGGCATACATCCTTTACGAGATCTTCGCTGGCGAAGCTGGCAAGGTTTCCGCGGAGTCCGCTCCGGAGGCTGTCCAGAAGTCGTTCGGCACGATGCGTATGATTGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCTTGGCGGCA---------GTG---GCTGTTGTCAGCGCT---GGTATC------------------------------------TTCTGGCGC---CTGATGATCGGTTCTCTAGTGATGCTGGTTGCCGGTTACCTCGGCGAA---------GCA------------------GGC------CTT---------------------------------GTT------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTTGTTGGCATGGCTGGATGGGCATACATCCTTTACGAGATC---------------TTC------GCT---GGCGAAGCTGGCAAGGTTTCCGCGGAG------TCC---GCTCCGGAGGCTGTC---CAG---AAG---TCG---TTC---GGC---ACGATG---CGTATGATTGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927257 [IV-Proteo4-BAC17H08] PRGD_OTU007_183cfaf26de40bc9c0bdbb491f78a649 gb|KJ927257| PRGD_OTU007_183cfaf26de40bc9c0bdbb491f78a649, putative proteorhodopsin gene, partial cds. PRGD_OTU007_183cfaf26de40bc9c0bdbb491f78a649, putative proteorhodopsin gene, partial cds. KJ927257 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCAGTGGCTGTTGTCAGCGCTGGTATCTTCTGGCGCCTGATGATCGGTTCTCTAGTGATGCTGGTTGCTGGTTACCTCGGCGAAGCAGGCCTTGTTAATGCATGGCTCGGCTTTGTTGTTGGCATGGCTGGATGGGCATACATCCTTTACGAGATCTTCGCTGGCGAAGCCGGCAAGGTTTCCGCGGAGTCCGCTCCGGAGGCTGTCCAGAAGTCGTTTGGCACGATGCGTATGATTGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCA---------GTG---GCTGTTGTCAGCGCT---GGTATC------------------------------------TTCTGGCGC---CTGATGATCGGTTCTCTAGTGATGCTGGTTGCTGGTTACCTCGGCGAA---------GCA------------------GGC------CTT---------------------------------GTT------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTTGTTGGCATGGCTGGATGGGCATACATCCTTTACGAGATC---------------TTC------GCT---GGCGAAGCCGGCAAGGTTTCCGCGGAG------TCC---GCTCCGGAGGCTGTC---CAG---AAG---TCG---TTT---GGC---ACGATG---CGTATGATTGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927277 [IV-Proteo4-BAC17H08] PRGD_OTU007_7ec7e2c0819280b5e6d742a4ce4bd056 gb|KJ927277| PRGD_OTU007_7ec7e2c0819280b5e6d742a4ce4bd056, putative proteorhodopsin gene, partial cds. PRGD_OTU007_7ec7e2c0819280b5e6d742a4ce4bd056, putative proteorhodopsin gene, partial cds. KJ927277 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTGATTACTGTCCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCAGTGGCTGTTGTCAGCGCTGGTATCTTCTGGCGCCTGATGATCGGTTCTCTAGTGATGCTGGTTGCCGGTTACCTCGGCGAAGCAGGCCTTGTTAATGCATGGCTCGGCTTTGTTGTTGGCATGGCTGGATGGGCATACATCCTTTACGAGATCTTCGCTGGCGAAGCTGGCAAGGTTTCAGCGGAGTCCGCTCCGGAGGCTGTGCAGAAGTCGTTTGGCACAATGCGTATGATTGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTCCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCA---------GTG---GCTGTTGTCAGCGCT---GGTATC------------------------------------TTCTGGCGC---CTGATGATCGGTTCTCTAGTGATGCTGGTTGCCGGTTACCTCGGCGAA---------GCA------------------GGC------CTT---------------------------------GTT------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTTGTTGGCATGGCTGGATGGGCATACATCCTTTACGAGATC---------------TTC------GCT---GGCGAAGCTGGCAAGGTTTCAGCGGAG------TCC---GCTCCGGAGGCTGTG---CAG---AAG---TCG---TTT---GGC---ACAATG---CGTATGATTGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927250 [IV-Proteo4-BAC17H08] PRGD_OTU007_0b644dc06a65220cf585bf73e01fd76a gb|KJ927250| PRGD_OTU007_0b644dc06a65220cf585bf73e01fd76a, putative proteorhodopsin gene, partial cds. PRGD_OTU007_0b644dc06a65220cf585bf73e01fd76a, putative proteorhodopsin gene, partial cds. KJ927250 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATTACTGTCCCGCTCCAAATGGTAGAATTCTACTTCATCTTGGCAGCAGTGGCTGTTGTCAGCGCTGGTATCTTCTGGCGCCTGATGATCGGTTCTCTAGTGATGCTGGTTGCCGGTTACCTCGGCGAAGCAGGCCTTGTTAATGCATGGCTTGGCTTTGTTGTTGGCATGGCCGGATGGGCATACATCCTTTACGAGATCTTCGCTGGCGAAGCTGGCAAGGTTTCCGCGGAGTCCGCTCCAGAGGCTGTTCAGAAGTCGTTCGGCACGATGCGTATGATTGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTCCCGCTCCAAATGGTAGAATTCTACTTCATCTTGGCAGCA---------GTG---GCTGTTGTCAGCGCT---GGTATC------------------------------------TTCTGGCGC---CTGATGATCGGTTCTCTAGTGATGCTGGTTGCCGGTTACCTCGGCGAA---------GCA------------------GGC------CTT---------------------------------GTT------------------------------------------------------------------AATGCA------------------TGGCTTGGC---TTTGTTGTTGGCATGGCCGGATGGGCATACATCCTTTACGAGATC---------------TTC------GCT---GGCGAAGCTGGCAAGGTTTCCGCGGAG------TCC---GCTCCAGAGGCTGTT---CAG---AAG---TCG---TTC---GGC---ACGATG---CGTATGATTGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927311 [IV-Proteo4-BAC17H08] PRGD_OTU007_f831907ec111ee0d52026163d5604674 gb|KJ927311| PRGD_OTU007_f831907ec111ee0d52026163d5604674, putative proteorhodopsin gene, partial cds. PRGD_OTU007_f831907ec111ee0d52026163d5604674, putative proteorhodopsin gene, partial cds. KJ927311 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATTACTGTCCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCAGTGGCTGTTGTCAGCGCTGGCATCTTCTGGCGCCTGATGATCGGTTCTCTAGTGATGCTGGTTGCCGGTTACCTCGGCGAAGCAGGCCTTGTTAATGCATGGCTCGGCTTTGTTGTTGGCATGGCCGGATGGGCATACATCCTTTACGAGATCTTCGCTGGCGAAGCTGGCAAGGTTTCCGCGGAGTCCGCTCCGGAGGCTGTTCAGAAGTCGTTCGGCACGATGCGTATGATTGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTCCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCA---------GTG---GCTGTTGTCAGCGCT---GGCATC------------------------------------TTCTGGCGC---CTGATGATCGGTTCTCTAGTGATGCTGGTTGCCGGTTACCTCGGCGAA---------GCA------------------GGC------CTT---------------------------------GTT------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTTGTTGGCATGGCCGGATGGGCATACATCCTTTACGAGATC---------------TTC------GCT---GGCGAAGCTGGCAAGGTTTCCGCGGAG------TCC---GCTCCGGAGGCTGTT---CAG---AAG---TCG---TTC---GGC---ACGATG---CGTATGATTGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927294 [IV-Proteo4-BAC17H08] PRGD_OTU007_bcff23a9e716643a0fd51a43a5bac6bd gb|KJ927294| PRGD_OTU007_bcff23a9e716643a0fd51a43a5bac6bd, putative proteorhodopsin gene, partial cds. PRGD_OTU007_bcff23a9e716643a0fd51a43a5bac6bd, putative proteorhodopsin gene, partial cds. KJ927294 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (33.935, 18.508), Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATTCTGGCGGCAGTGGCTGTTGTCAGCGCTGGTATCTTCTGGCGCCTGATGATCGGTTCTCTAGTGATGCTGGTTGCCGGTTACCTCGGCGAAGCAGGCCTTGTTAATGCATGGCTCGGCTTTGTTGTTGGCCTTGCTGGATGGGCATACATCCTTTACGAGATCTTCGCTGGCGAAGCCGGCAAGGTTTCCGCGGAGTCCGCTCCGGAGGCTGTCCAGAAGTCGTTCGGCACGATGCGTATGATTGTGACCGTG LITVPLQMVEFYFILAAVAVVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGLAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATTCTGGCGGCA---------GTG---GCTGTTGTCAGCGCT---GGTATC------------------------------------TTCTGGCGC---CTGATGATCGGTTCTCTAGTGATGCTGGTTGCCGGTTACCTCGGCGAA---------GCA------------------GGC------CTT---------------------------------GTT------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTTGTTGGCCTTGCTGGATGGGCATACATCCTTTACGAGATC---------------TTC------GCT---GGCGAAGCCGGCAAGGTTTCCGCGGAG------TCC---GCTCCGGAGGCTGTC---CAG---AAG---TCG---TTC---GGC---ACGATG---CGTATGATTGTGACCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGLAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927284 [IV-Proteo4-BAC17H08] PRGD_OTU007_9781f81f1d6172551e6ff385971d3b23 gb|KJ927284| PRGD_OTU007_9781f81f1d6172551e6ff385971d3b23, putative proteorhodopsin gene, partial cds. PRGD_OTU007_9781f81f1d6172551e6ff385971d3b23, putative proteorhodopsin gene, partial cds. KJ927284 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATTACTGTTCCGCTTCAGATGGTAGAATTCTACTTCATCCTGGCGGCAGTGGCTGTTGTCAGCGCTGGTATCTTCTGGCGCCTGATGATCGGTTCTCTGGTGATGCTGGTTGCTGGTTACCTAGGTGAAGCAGGCCTTGTTAATGCATGGCTCGGCTTTGTTGTTGGCATGGCTGGATGGGCATACATCCTTTACGAGATCTTCGCTGGCGAAGCCGGCAAGGTTTCCGCGGAATCCGCTCCGGAAGCTGTCCAGAAGTCGTTCGGCACGATGCGTATGATTGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTTCCGCTTCAGATGGTAGAATTCTACTTCATCCTGGCGGCA---------GTG---GCTGTTGTCAGCGCT---GGTATC------------------------------------TTCTGGCGC---CTGATGATCGGTTCTCTGGTGATGCTGGTTGCTGGTTACCTAGGTGAA---------GCA------------------GGC------CTT---------------------------------GTT------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTTGTTGGCATGGCTGGATGGGCATACATCCTTTACGAGATC---------------TTC------GCT---GGCGAAGCCGGCAAGGTTTCCGCGGAA------TCC---GCTCCGGAAGCTGTC---CAG---AAG---TCG---TTC---GGC---ACGATG---CGTATGATTGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927299 [IV-Proteo4-BAC17H08] PRGD_OTU007_dd3d41aa4d98998433c4df0e4fdd9428 gb|KJ927299| PRGD_OTU007_dd3d41aa4d98998433c4df0e4fdd9428, putative proteorhodopsin gene, partial cds. PRGD_OTU007_dd3d41aa4d98998433c4df0e4fdd9428, putative proteorhodopsin gene, partial cds. KJ927299 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATTACTGTTCCGCTTCAGATGGTAGAATTCTACTTCATCCTGGCGGCAGTGGCTGTTGTCAGCGCTGGTATCTTCTGGCGCTTGATGATCGGTTCACTAGTGATGCTGGTTGCTGGTTACCTAGGCGAAGCAGGCCTTGTTAATGCATGGCTCGGCTTTGTTGTTGGCATGGCTGGATGGGCATACATCCTTTACGAGATCTTCGCTGGCGAAGCCGGCAAGGTTTCAGCGGAGTCCGCTCCGGAGGCTGTCCAAAAGTCGTTCGGCACAATGCGTATGATTGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTTCCGCTTCAGATGGTAGAATTCTACTTCATCCTGGCGGCA---------GTG---GCTGTTGTCAGCGCT---GGTATC------------------------------------TTCTGGCGC---TTGATGATCGGTTCACTAGTGATGCTGGTTGCTGGTTACCTAGGCGAA---------GCA------------------GGC------CTT---------------------------------GTT------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTTGTTGGCATGGCTGGATGGGCATACATCCTTTACGAGATC---------------TTC------GCT---GGCGAAGCCGGCAAGGTTTCAGCGGAG------TCC---GCTCCGGAGGCTGTC---CAA---AAG---TCG---TTC---GGC---ACAATG---CGTATGATTGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927262 [IV-Proteo4-BAC17H08] PRGD_OTU007_1fa6b9289c2e442768bf7118646a40d1 gb|KJ927262| PRGD_OTU007_1fa6b9289c2e442768bf7118646a40d1, putative proteorhodopsin gene, partial cds. PRGD_OTU007_1fa6b9289c2e442768bf7118646a40d1, putative proteorhodopsin gene, partial cds. KJ927262 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCTTGGCGGCAGTGGCTGTTGTCAGCGCTGGTATCTTCTGGCGCCTGATGATCGGTTCTCTAGTGATGCTGGTTGCCGGTTACCTCGGCGAAGCAGGCCTTGTTAATGCATGGCTTGGCTTTGTTGTTGGCATGGCTGGATGGGCATACATCCTTTACGAGATCTTCGCTGGCGAAGCTGGCAAGGTTTCCGCGGAGTCCGCTCCGGAGGCTGTACAGAAGTCGTTCGGCACGATGCGTATGATCGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCTTGGCGGCA---------GTG---GCTGTTGTCAGCGCT---GGTATC------------------------------------TTCTGGCGC---CTGATGATCGGTTCTCTAGTGATGCTGGTTGCCGGTTACCTCGGCGAA---------GCA------------------GGC------CTT---------------------------------GTT------------------------------------------------------------------AATGCA------------------TGGCTTGGC---TTTGTTGTTGGCATGGCTGGATGGGCATACATCCTTTACGAGATC---------------TTC------GCT---GGCGAAGCTGGCAAGGTTTCCGCGGAG------TCC---GCTCCGGAGGCTGTA---CAG---AAG---TCG---TTC---GGC---ACGATG---CGTATGATCGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927260 [IV-Proteo4-BAC17H08] PRGD_OTU007_191c425ddd5b13ab4d596597a6419e67 gb|KJ927260| PRGD_OTU007_191c425ddd5b13ab4d596597a6419e67, putative proteorhodopsin gene, partial cds. PRGD_OTU007_191c425ddd5b13ab4d596597a6419e67, putative proteorhodopsin gene, partial cds. KJ927260 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), Indian Ocean (-35.05, 23.73) CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTATTTCATCCTGGCGGCAGTGGCTGTTGTCAGCGCTGGTATATTCTGGCGCTTGATGATCGGTTCTCTAGTGATGCTGGTTGCCGGTTACCTCGGCGAAGCAGGCCTTGTTAATGCATGGCTTGGCTTTGTTGTTGGCATGGCTGGATGGGCATACATCCTTTACGAGATCTTCGCTGGCGAAGCCGGCAAGGTTTCCGCGGAGTCCGCTCCGGAGGCTGTCCAGAAGTCGTTCGGCACGATGCGTATGATTGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTATTTCATCCTGGCGGCA---------GTG---GCTGTTGTCAGCGCT---GGTATA------------------------------------TTCTGGCGC---TTGATGATCGGTTCTCTAGTGATGCTGGTTGCCGGTTACCTCGGCGAA---------GCA------------------GGC------CTT---------------------------------GTT------------------------------------------------------------------AATGCA------------------TGGCTTGGC---TTTGTTGTTGGCATGGCTGGATGGGCATACATCCTTTACGAGATC---------------TTC------GCT---GGCGAAGCCGGCAAGGTTTCCGCGGAG------TCC---GCTCCGGAGGCTGTC---CAG---AAG---TCG---TTC---GGC---ACGATG---CGTATGATTGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927302 [IV-Proteo4-BAC17H08] PRGD_OTU007_e0c9ff8fec723ab878a3f64a80255f06 gb|KJ927302| PRGD_OTU007_e0c9ff8fec723ab878a3f64a80255f06, putative proteorhodopsin gene, partial cds. PRGD_OTU007_e0c9ff8fec723ab878a3f64a80255f06, putative proteorhodopsin gene, partial cds. KJ927302 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCAGTGGCTGTTGTCAGCGCTGGTATATTCTGGCGCTTGATGATCGGTTCTCTAGTGATGCTGGTTGCCGGTTACCTCGGCGAAGCAGGCCTTGTTAATGCATGGCTTGGCTTTGTTGTTGGCATGGCTGGATGGGCATACATCCTTTACGAGATCTTCGCTGGCGAAGCCGGTAAGGTTTCCGCGGAGTCCGCTCCGGAGGCTGTCCAGAAGTCGTTCGGCACGATGCGTATGATTGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCA---------GTG---GCTGTTGTCAGCGCT---GGTATA------------------------------------TTCTGGCGC---TTGATGATCGGTTCTCTAGTGATGCTGGTTGCCGGTTACCTCGGCGAA---------GCA------------------GGC------CTT---------------------------------GTT------------------------------------------------------------------AATGCA------------------TGGCTTGGC---TTTGTTGTTGGCATGGCTGGATGGGCATACATCCTTTACGAGATC---------------TTC------GCT---GGCGAAGCCGGTAAGGTTTCCGCGGAG------TCC---GCTCCGGAGGCTGTC---CAG---AAG---TCG---TTC---GGC---ACGATG---CGTATGATTGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927304 [IV-Proteo4-BAC17H08] PRGD_OTU007_e7428b0f0019645b6418b4e99a7307ff gb|KJ927304| PRGD_OTU007_e7428b0f0019645b6418b4e99a7307ff, putative proteorhodopsin gene, partial cds. PRGD_OTU007_e7428b0f0019645b6418b4e99a7307ff, putative proteorhodopsin gene, partial cds. KJ927304 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-14.48, 113.45; -33.28, 45.35) TTGATCACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCAGCGGTGGCCGTTGTTAGCGCTGGCATGTTCTGGCGCTTGATGATCGGTTCGCTGGTAATGCTGGTTGCTGGTTACCTTGGTGAAGCAGGCCTTGTGAATGCATGGCTCGGCTTTGTCGTAGGTATGGCCGGATGGGCATACATCCTCTACGAGATCTTTGCTGGTGAAGCTGGCAAGGTGTCCGCAGAGTCTGCGCCGGAGGCTGTTCAGAAGTCGTTCAGCACGATGCGTATGATCGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGMFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFSTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCAGCG---------GTG---GCCGTTGTTAGCGCT---GGCATG------------------------------------TTCTGGCGC---TTGATGATCGGTTCGCTGGTAATGCTGGTTGCTGGTTACCTTGGTGAA---------GCA------------------GGC------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTCGTAGGTATGGCCGGATGGGCATACATCCTCTACGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTGTCCGCAGAG------TCT---GCGCCGGAGGCTGTT---CAG---AAG---TCG---TTC---AGC---ACGATG---CGTATGATCGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GM------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-S-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927245 [IV-Proteo4-BAC17H08] PRGD_OTU007_otuREP_2a6ac1628a24ca68941a69147af24101 gb|KJ927245| PRGD_OTU007_otuREP_2a6ac1628a24ca68941a69147af24101, putative proteorhodopsin gene, partial cds. PRGD_OTU007_otuREP_2a6ac1628a24ca68941a69147af24101, putative proteorhodopsin gene, partial cds. KJ927245 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Pacific side (70.9139, -128.9264; ; ; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATCACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCGGTGGCCGTTGTTAGCGCTGGTATGTTCTGGCGCTTGATGATCGGTTCGCTGGTAATGCTGGTTGCTGGTTACCTTGGTGAAGCAGGCCTTGTGAATGCATGGCTCGGCTTTGTCGTAGGTATGGCCGGATGGGCATACATCCTCTACGAGATCTTTGCTGGTGAAGCTGGCAAGGTGTCCGCAGAGTCCGCGCCGGAGGCTGTTCAGAAGTCGTTCAGCACGATGCGTATGATCGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGMFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFSTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCG---------GTG---GCCGTTGTTAGCGCT---GGTATG------------------------------------TTCTGGCGC---TTGATGATCGGTTCGCTGGTAATGCTGGTTGCTGGTTACCTTGGTGAA---------GCA------------------GGC------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTCGTAGGTATGGCCGGATGGGCATACATCCTCTACGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTGTCCGCAGAG------TCC---GCGCCGGAGGCTGTT---CAG---AAG---TCG---TTC---AGC---ACGATG---CGTATGATCGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GM------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-S-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927255 [IV-Proteo4-BAC17H08] PRGD_OTU007_1566b065d78fc578bb1847826ba149e6 gb|KJ927255| PRGD_OTU007_1566b065d78fc578bb1847826ba149e6, putative proteorhodopsin gene, partial cds. PRGD_OTU007_1566b065d78fc578bb1847826ba149e6, putative proteorhodopsin gene, partial cds. KJ927255 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937), Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCGGTGGCCGTTGTTAGCGCTGGTATGTTCTGGCGCTTGATGATCGGTTCGCTGGTAATGCTGGTTGCTGGTTACCTTGGTGAAGCAGGCCTTGTGAATGCATGGCTCGGCTTTGTCGTAGGTATGGCCGGATGGGCATACATTCTCTACGAGATCTTTGCTGGTGAAGCTGGCAAGGTGTCCGCAGAGTCCGCGCCAGAGGCTGTTCAGAAGTCGTTCAGCACGATGCGTATGATCGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGMFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFSTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCG---------GTG---GCCGTTGTTAGCGCT---GGTATG------------------------------------TTCTGGCGC---TTGATGATCGGTTCGCTGGTAATGCTGGTTGCTGGTTACCTTGGTGAA---------GCA------------------GGC------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTCGTAGGTATGGCCGGATGGGCATACATTCTCTACGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTGTCCGCAGAG------TCC---GCGCCAGAGGCTGTT---CAG---AAG---TCG---TTC---AGC---ACGATG---CGTATGATCGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GM------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-S-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927264 [IV-Proteo4-BAC17H08] PRGD_OTU007_229314a952fcde19693732a21fabd7a6 gb|KJ927264| PRGD_OTU007_229314a952fcde19693732a21fabd7a6, putative proteorhodopsin gene, partial cds. PRGD_OTU007_229314a952fcde19693732a21fabd7a6, putative proteorhodopsin gene, partial cds. KJ927264 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCGGTGGCCGTTGTTAGCGCTGGTATGTTCTGGCGCTTGATGATCGGTTCGCTGGTAATGCTGGTTGCTGGTTACCTTGGTGAAGCAGGCCTTGTAAATGCATGGCTCGGCTTTGTCGTTGGTATGGCCGGATGGGCATACATCCTCTACGAGATCTTTGCTGGTGAAGCTGGCAAGGTGTCCGCAGAGTCCGCGCCAGAGGCTGTTCAGAAGTCGTTCAGCACGATGCGTATGATCGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGMFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFSTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCG---------GTG---GCCGTTGTTAGCGCT---GGTATG------------------------------------TTCTGGCGC---TTGATGATCGGTTCGCTGGTAATGCTGGTTGCTGGTTACCTTGGTGAA---------GCA------------------GGC------CTT---------------------------------GTA------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTCGTTGGTATGGCCGGATGGGCATACATCCTCTACGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTGTCCGCAGAG------TCC---GCGCCAGAGGCTGTT---CAG---AAG---TCG---TTC---AGC---ACGATG---CGTATGATCGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GM------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-S-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927287 [IV-Proteo4-BAC17H08] PRGD_OTU007_a536f8c89b86e31c6cf99b40ef5658df gb|KJ927287| PRGD_OTU007_a536f8c89b86e31c6cf99b40ef5658df, putative proteorhodopsin gene, partial cds. PRGD_OTU007_a536f8c89b86e31c6cf99b40ef5658df, putative proteorhodopsin gene, partial cds. KJ927287 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTGATCACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCGGTGGCCGTTGTAAGCGCTGGCATGTTCTGGCGCTTGATGATCGGTTCGCTGGTAATGCTGGTTGCTGGTTACCTTGGTGAAGCAGGCCTTGTGAATGCATGGCTCGGCTTTGTCGTAGGTATGGCCGGATGGGCATACATCCTCTACGAGATCTTTGCTGGTGAAGCTGGCAAGGTGTCCGCAGAGTCCGCGCCGGAGGCTGTTCAGAAGTCGTTCAGCACGATGCGTATGATCGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGMFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFSTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCG---------GTG---GCCGTTGTAAGCGCT---GGCATG------------------------------------TTCTGGCGC---TTGATGATCGGTTCGCTGGTAATGCTGGTTGCTGGTTACCTTGGTGAA---------GCA------------------GGC------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTCGTAGGTATGGCCGGATGGGCATACATCCTCTACGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTGTCCGCAGAG------TCC---GCGCCGGAGGCTGTT---CAG---AAG---TCG---TTC---AGC---ACGATG---CGTATGATCGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GM------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-S-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927251 [IV-Proteo4-BAC17H08] PRGD_OTU007_0d4aa35af1196783bfdaa56049125ca9 gb|KJ927251| PRGD_OTU007_0d4aa35af1196783bfdaa56049125ca9, putative proteorhodopsin gene, partial cds. PRGD_OTU007_0d4aa35af1196783bfdaa56049125ca9, putative proteorhodopsin gene, partial cds. KJ927251 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCGGTGGCCGTTGTTACCGCTGGTATGTTCTGGCGCTTGATGATCGGTTCGCTGGTAATGCTGGTTGCTGGTTACCTTGGTGAAGCAGGCCTTGTGAATGCATGGCTCGGCTTTGTCGTAGGTATGGCCGGTTGGGCATACATCCTCTACGAGATCTTTGCTGGTGAAGCTGGCAAGGTGTCCGCAGAGTCTGCGCCGGAGGCTGTTCAGAAGTCGTTCAGCACGATGCGTATGATCGTGACCGTC LITVPLQMVEFYFILAAVAVVTAGMFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFSTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCG---------GTG---GCCGTTGTTACCGCT---GGTATG------------------------------------TTCTGGCGC---TTGATGATCGGTTCGCTGGTAATGCTGGTTGCTGGTTACCTTGGTGAA---------GCA------------------GGC------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTCGTAGGTATGGCCGGTTGGGCATACATCCTCTACGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTGTCCGCAGAG------TCT---GCGCCGGAGGCTGTT---CAG---AAG---TCG---TTC---AGC---ACGATG---CGTATGATCGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVTA-GM------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-S-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927261 [IV-Proteo4-BAC17H08] PRGD_OTU007_1dcd7b43d00b7cd92eac15bdbd60b51d gb|KJ927261| PRGD_OTU007_1dcd7b43d00b7cd92eac15bdbd60b51d, putative proteorhodopsin gene, partial cds. PRGD_OTU007_1dcd7b43d00b7cd92eac15bdbd60b51d, putative proteorhodopsin gene, partial cds. KJ927261 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACTGTCCCGCTCCAGATGGTAGAATTCTACTTCATCTTGGCGGCAGTGGCGGTTGTTTGCGCTGGTATGTTCTGGCGCTTAATGGTCGGTTCGCTGGTAATGCTGGTCGCTGGCTACCTTGGTGAAGCAGGCCTTGTGAATGCATGGCTCGGCTTTGTCGTAGGCATGGCCGGATGGGCATACATTCTTTACGAGATCTTTGCTGGTGAAGCTGGCAAGGTTTCGGCAGAGTCTGCGCCAGAGGCTGTTCAGAAGTCGTTTAGCACGATGCGTATGATTGTGACCGTC LITVPLQMVEFYFILAAVAVVCAGMFWRLMVGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFSTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTCCCGCTCCAGATGGTAGAATTCTACTTCATCTTGGCGGCA---------GTG---GCGGTTGTTTGCGCT---GGTATG------------------------------------TTCTGGCGC---TTAATGGTCGGTTCGCTGGTAATGCTGGTCGCTGGCTACCTTGGTGAA---------GCA------------------GGC------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTCGTAGGCATGGCCGGATGGGCATACATTCTTTACGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTTTCGGCAGAG------TCT---GCGCCAGAGGCTGTT---CAG---AAG---TCG---TTT---AGC---ACGATG---CGTATGATTGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVCA-GM------------FWR-LMVGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-S-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927276 [IV-Proteo4-BAC17H08] PRGD_OTU007_79504404a70110bd4e2fe1b777b2f591 gb|KJ927276| PRGD_OTU007_79504404a70110bd4e2fe1b777b2f591, putative proteorhodopsin gene, partial cds. PRGD_OTU007_79504404a70110bd4e2fe1b777b2f591, putative proteorhodopsin gene, partial cds. KJ927276 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATAACTGTTCCGCTCCAGATGGTAGAATTCTACTTTATCCTGGCGGCGGTGGCGGTTGTTAGCGCTGGTATGTTCTGGCGCTTGATGATCGGCTCGCTGGTAATGCTGGTTGCTGGTTACCTTGGTGAAGCAGGCCTTGTGAATGCATGGCTCGGCTTTGTCGTAGGCTTGGCCGGATGGGCATACATACTTTACGAGGTCTTTGCTGGTGAAGCTGGCAAGGTGTCGGCAGAGTCCGCGCCAGAAGCTGTTCAGAAATCGTTCAGCACGATGCGTATGATCGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGMFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGLAGWAYILYEVFAGEAGKVSAESAPEAVQKSFSTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACTGTTCCGCTCCAGATGGTAGAATTCTACTTTATCCTGGCGGCG---------GTG---GCGGTTGTTAGCGCT---GGTATG------------------------------------TTCTGGCGC---TTGATGATCGGCTCGCTGGTAATGCTGGTTGCTGGTTACCTTGGTGAA---------GCA------------------GGC------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTCGTAGGCTTGGCCGGATGGGCATACATACTTTACGAGGTC---------------TTT------GCT---GGTGAAGCTGGCAAGGTGTCGGCAGAG------TCC---GCGCCAGAAGCTGTT---CAG---AAA---TCG---TTC---AGC---ACGATG---CGTATGATCGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GM------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGLAGWAYILYEV-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-S-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927309 [IV-Proteo4-BAC17H08] PRGD_OTU007_f362178d2608c77dbbb0a253d965a1e0 gb|KJ927309| PRGD_OTU007_f362178d2608c77dbbb0a253d965a1e0, putative proteorhodopsin gene, partial cds. PRGD_OTU007_f362178d2608c77dbbb0a253d965a1e0, putative proteorhodopsin gene, partial cds. KJ927309 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTGATCACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCAGTGGCGGTTGTTTGCGCTGGTATGTTCTGGCGCTTGATGATCGGTTCGCTGGTAATGCTGGTTGCTGGTTACCTTGGTGAAGCAGGCCTTGTGAATGCATGGCTCGGCTTTGTCGTAGGCCTGGCCGGATGGGCATACATCCTCTACGAGATCTTTGCTGGTGAAGCTGGCAAGGTATCGGCAGAGTCCGCGCCGGAGGCTGTTCAGAAGTCATTCAGCACGATGCGTATGATCGTGACCGTC LITVPLQMVEFYFILAAVAVVCAGMFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGLAGWAYILYEIFAGEAGKVSAESAPEAVQKSFSTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCA---------GTG---GCGGTTGTTTGCGCT---GGTATG------------------------------------TTCTGGCGC---TTGATGATCGGTTCGCTGGTAATGCTGGTTGCTGGTTACCTTGGTGAA---------GCA------------------GGC------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTCGTAGGCCTGGCCGGATGGGCATACATCCTCTACGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTATCGGCAGAG------TCC---GCGCCGGAGGCTGTT---CAG---AAG---TCA---TTC---AGC---ACGATG---CGTATGATCGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVCA-GM------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGLAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-S-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927285 [IV-Proteo4-BAC17H08] PRGD_OTU007_9a91278bde53b3dc094d68b03a004428 gb|KJ927285| PRGD_OTU007_9a91278bde53b3dc094d68b03a004428, putative proteorhodopsin gene, partial cds. PRGD_OTU007_9a91278bde53b3dc094d68b03a004428, putative proteorhodopsin gene, partial cds. KJ927285 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (76.3333, 14.8833), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTGATCACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCGGTGGCGGTTGTTAGCGCTGGTATGTTCTGGCGCTTGATGATTGGTTCGCTGGTAATGCTGGTTGCTGGTTACCTTGGTGAAGCAGGCCTTGTGAATGCATGGCTCGGCTTTGTCGTAGGTCTGGCCGGATGGGCATACATCCTCTACGAGATCTTTGCTGGTGAAGCTGGCAAGGTGTCCGCAGAGTCCGCGCCGGAGGCTGTTCAGAAGTCGTTTAGCACGATGCGTATGATCGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGMFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGLAGWAYILYEIFAGEAGKVSAESAPEAVQKSFSTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCG---------GTG---GCGGTTGTTAGCGCT---GGTATG------------------------------------TTCTGGCGC---TTGATGATTGGTTCGCTGGTAATGCTGGTTGCTGGTTACCTTGGTGAA---------GCA------------------GGC------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTCGTAGGTCTGGCCGGATGGGCATACATCCTCTACGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTGTCCGCAGAG------TCC---GCGCCGGAGGCTGTT---CAG---AAG---TCG---TTT---AGC---ACGATG---CGTATGATCGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GM------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGLAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-S-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927265 [IV-Proteo4-BAC17H08] PRGD_OTU007_344a0c03c4d9cec14bdd339dca0103fe gb|KJ927265| PRGD_OTU007_344a0c03c4d9cec14bdd339dca0103fe, putative proteorhodopsin gene, partial cds. PRGD_OTU007_344a0c03c4d9cec14bdd339dca0103fe, putative proteorhodopsin gene, partial cds. KJ927265 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), Arctic Ocean-Atlantic side (73.9992, 19.2097), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCAGCGGTGGCGGTTGTTAGCGCTGGTATGTTCTGGCGCTTGATGATCGGTTCGCTTGTAATGCTGGTTGCTGGTTACCTTGGTGAAGCAGGCCTTGTCAATGCATGGCTCGGCTTTGTTGTAGGTATGGCCGGATGGGCATACATCCTCTACGAGATCTTTGCTGGTGAAGCTGGCAAGGTGTCCGCAGAGTCCGCGCCGGAGGCTGTTCAGAAGTCGTTCAGCACGATGCGTATGATTGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGMFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFSTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCAGCG---------GTG---GCGGTTGTTAGCGCT---GGTATG------------------------------------TTCTGGCGC---TTGATGATCGGTTCGCTTGTAATGCTGGTTGCTGGTTACCTTGGTGAA---------GCA------------------GGC------CTT---------------------------------GTC------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTTGTAGGTATGGCCGGATGGGCATACATCCTCTACGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTGTCCGCAGAG------TCC---GCGCCGGAGGCTGTT---CAG---AAG---TCG---TTC---AGC---ACGATG---CGTATGATTGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GM------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-S-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927272 [IV-Proteo4-BAC17H08] PRGD_OTU007_5ba184af944db6d403c446defac32059 gb|KJ927272| PRGD_OTU007_5ba184af944db6d403c446defac32059, putative proteorhodopsin gene, partial cds. PRGD_OTU007_5ba184af944db6d403c446defac32059, putative proteorhodopsin gene, partial cds. KJ927272 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATTACTGTTCCGCTCCAAATGGTAGAATTCTACTTCATCCTGGCAGCGGTGGCGGTCGTGAGCGCGGGTATGTTCTGGCGCTTGATGATCGGTTCGCTGGTAATGCTGGTTGCTGGTTACCTTGGTGAAGCAGGCCTTGTGAATGCATGGCTCGGCTTTGTCGTAGGTATGGCCGGATGGGCATACATCCTCTACGAGATCTTTGCTGGTGAAGCTGGCAAGGTGTCTGCAGAGTCCGCGCCGGAGGCTGTTCAGAAGTCGTTCAGCACGATGCGTATGATTGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGMFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFSTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTTCCGCTCCAAATGGTAGAATTCTACTTCATCCTGGCAGCG---------GTG---GCGGTCGTGAGCGCG---GGTATG------------------------------------TTCTGGCGC---TTGATGATCGGTTCGCTGGTAATGCTGGTTGCTGGTTACCTTGGTGAA---------GCA------------------GGC------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTCGTAGGTATGGCCGGATGGGCATACATCCTCTACGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTGTCTGCAGAG------TCC---GCGCCGGAGGCTGTT---CAG---AAG---TCG---TTC---AGC---ACGATG---CGTATGATTGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GM------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-S-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927279 [IV-Proteo4-BAC17H08] PRGD_OTU007_85f53b225c3579a5514510cb2a1e3773 gb|KJ927279| PRGD_OTU007_85f53b225c3579a5514510cb2a1e3773, putative proteorhodopsin gene, partial cds. PRGD_OTU007_85f53b225c3579a5514510cb2a1e3773, putative proteorhodopsin gene, partial cds. KJ927279 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCAGCGGTGGCGGTTGTTACCGCTGGTATGTTCTGGCGCTTGATGATCGGTTCGCTGGTAATGCTGGTTGCTGGTTACCTTGGTGAAGCAGGCCTTGTGAATGCATGGCTCGGCTTTGTCGTAGGTATGGCCGGATGGGCATACATCCTCTACGAGATCTTTGCTGGTGAAGCCGGCAAAGTGTCCGCAGAGTCCGCGCCGGAAGCTGTTCAGAAGTCGTTCAGCACGATGCGTATGATTGTGACTGTC LITVPLQMVEFYFILAAVAVVTAGMFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFSTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCAGCG---------GTG---GCGGTTGTTACCGCT---GGTATG------------------------------------TTCTGGCGC---TTGATGATCGGTTCGCTGGTAATGCTGGTTGCTGGTTACCTTGGTGAA---------GCA------------------GGC------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTCGTAGGTATGGCCGGATGGGCATACATCCTCTACGAGATC---------------TTT------GCT---GGTGAAGCCGGCAAAGTGTCCGCAGAG------TCC---GCGCCGGAAGCTGTT---CAG---AAG---TCG---TTC---AGC---ACGATG---CGTATGATTGTGACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVTA-GM------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-S-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927273 [IV-Proteo4-BAC17H08] PRGD_OTU007_6061050098adff05d977bf55b68d3820 gb|KJ927273| PRGD_OTU007_6061050098adff05d977bf55b68d3820, putative proteorhodopsin gene, partial cds. PRGD_OTU007_6061050098adff05d977bf55b68d3820, putative proteorhodopsin gene, partial cds. KJ927273 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637), Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (70.9139, -128.9264), Mediterranean Sea (33.762, 29.175), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCGGTGGCGGTTGTTAGCGCTGGTATGTTCTGGCGCTTAATGATCGGTTCGCTGGTAATGCTGGTTGCTGGTTACCTTGGTGAAGCAGGCCTTGTGAATGCATGGCTCGGCTTTGTCGTAGGTATGGCCGGATGGGCATACATCCTCTACGAGATCTTTGCTGGTGAAGCTGGCAAGGTGTCCGCAGAGTCCGCGCCGGAGGCTGTTCAGAAGTCGTTTAGCACGATGCGTATGATTGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGMFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFSTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCG---------GTG---GCGGTTGTTAGCGCT---GGTATG------------------------------------TTCTGGCGC---TTAATGATCGGTTCGCTGGTAATGCTGGTTGCTGGTTACCTTGGTGAA---------GCA------------------GGC------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTCGTAGGTATGGCCGGATGGGCATACATCCTCTACGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTGTCCGCAGAG------TCC---GCGCCGGAGGCTGTT---CAG---AAG---TCG---TTT---AGC---ACGATG---CGTATGATTGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GM------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-S-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927283 [IV-Proteo4-BAC17H08] PRGD_OTU007_955c83cec4d66740867d803614ef3e7e gb|KJ927283| PRGD_OTU007_955c83cec4d66740867d803614ef3e7e, putative proteorhodopsin gene, partial cds. PRGD_OTU007_955c83cec4d66740867d803614ef3e7e, putative proteorhodopsin gene, partial cds. KJ927283 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATTACTGTTCCGCTCCAGATGGTTGAATTCTACTTCATCCTGGCGGCGGTGGCGGTTGTTAGCGCTGGTATGTTCTGGCGCTTGATGATCGGTTCGCTGGTAATGCTGGTTGCTGGTTATCTTGGTGAAGCAGGCCTTGTGAATGCATGGCTCGGCTTTGTCGTAGGTATGGCCGGATGGGCATACATCCTCTACGAGATCTTTGCTGGTGAAGCTGGCAAGGTGTCCGCAGAGTCCGCGCCGGAGGCTGTTCAGAAGTCGTTCAGCACGATGCGTATGATTGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGMFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFSTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTTCCGCTCCAGATGGTTGAATTCTACTTCATCCTGGCGGCG---------GTG---GCGGTTGTTAGCGCT---GGTATG------------------------------------TTCTGGCGC---TTGATGATCGGTTCGCTGGTAATGCTGGTTGCTGGTTATCTTGGTGAA---------GCA------------------GGC------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTCGTAGGTATGGCCGGATGGGCATACATCCTCTACGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTGTCCGCAGAG------TCC---GCGCCGGAGGCTGTT---CAG---AAG---TCG---TTC---AGC---ACGATG---CGTATGATTGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GM------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-S-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927293 [IV-Proteo4-BAC17H08] PRGD_OTU007_b75491447d9df10fd6e40c59bf7cbdf6 gb|KJ927293| PRGD_OTU007_b75491447d9df10fd6e40c59bf7cbdf6, putative proteorhodopsin gene, partial cds. PRGD_OTU007_b75491447d9df10fd6e40c59bf7cbdf6, putative proteorhodopsin gene, partial cds. KJ927293 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATCACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCGGTAGCGGTTGTTAGCGCTGGTATCTTCTGGCGCTTGATGATCGGTTCGCTGGTAATGCTGGTCGCTGGTTACCTTGGTGAAGCAGGCCTTGTGAATGCATGGCTTGGCTTTGTCGTAGGTATGGCCGGATGGGCATACATTCTCTACGAGATCTTTGCTGGTGAAGCTGGCAAGGTGTCCGCAGAGTCCGCGCCTGAGGCTGTTCAGAAGTCGTTTGGCACGATGCGTATGATCGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCG---------GTA---GCGGTTGTTAGCGCT---GGTATC------------------------------------TTCTGGCGC---TTGATGATCGGTTCGCTGGTAATGCTGGTCGCTGGTTACCTTGGTGAA---------GCA------------------GGC------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTTGGC---TTTGTCGTAGGTATGGCCGGATGGGCATACATTCTCTACGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTGTCCGCAGAG------TCC---GCGCCTGAGGCTGTT---CAG---AAG---TCG---TTT---GGC---ACGATG---CGTATGATCGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927296 [IV-Proteo4-BAC17H08] PRGD_OTU007_c6ca56841d1fff167a5ab1b836082160 gb|KJ927296| PRGD_OTU007_c6ca56841d1fff167a5ab1b836082160, putative proteorhodopsin gene, partial cds. PRGD_OTU007_c6ca56841d1fff167a5ab1b836082160, putative proteorhodopsin gene, partial cds. KJ927296 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCGGTGGCGGTTGTTAGCGCTGGAATGTTCTGGCGCTTGATGATCGGTTCGCTGGTAATGCTGGTTGCTGGTTACCTTGGTGAAGCAGGCCTTGTGAATGCATGGCTTGGCTTTGTCGTAGGTATGGCCGGATGGGCATATATTCTCTACGAGATCTTTGCTGGTGAAGCTGGCAAGGTGTCCGCAGAGTCCGCGCCGGAGGCTGTTCAGAAGTCGTTTAGCACGATGCGTATGATCGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGMFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFSTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCG---------GTG---GCGGTTGTTAGCGCT---GGAATG------------------------------------TTCTGGCGC---TTGATGATCGGTTCGCTGGTAATGCTGGTTGCTGGTTACCTTGGTGAA---------GCA------------------GGC------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTTGGC---TTTGTCGTAGGTATGGCCGGATGGGCATATATTCTCTACGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTGTCCGCAGAG------TCC---GCGCCGGAGGCTGTT---CAG---AAG---TCG---TTT---AGC---ACGATG---CGTATGATCGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GM------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-S-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927247 [IV-Proteo4-BAC17H08] PRGD_OTU007_00aebc0a6e07d0388bd0c2ce8d12c179 gb|KJ927247| PRGD_OTU007_00aebc0a6e07d0388bd0c2ce8d12c179, putative proteorhodopsin gene, partial cds. PRGD_OTU007_00aebc0a6e07d0388bd0c2ce8d12c179, putative proteorhodopsin gene, partial cds. KJ927247 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCTGCGGTGGCGGTTGTTAGTGCTGGTATGTTCTGGCGCTTGATGATCGGTTCGCTGGTAATGCTGGTTGCTGGTTACCTTGGTGAAGCAGGCCTTGTGAATGCATGGCTCGGCTTTGTCGTAGGTATGGCCGGATGGGCATACATCCTCTACGAGATCTTTGCCGGTGAAGCTGGCAAGGTGTCCGCAGAGTCCGCGCCGGAGGCTGTTCAGAAGTCGTTCAGCACGATGCGTATGATTGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGMFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFSTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCTGCG---------GTG---GCGGTTGTTAGTGCT---GGTATG------------------------------------TTCTGGCGC---TTGATGATCGGTTCGCTGGTAATGCTGGTTGCTGGTTACCTTGGTGAA---------GCA------------------GGC------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTCGTAGGTATGGCCGGATGGGCATACATCCTCTACGAGATC---------------TTT------GCC---GGTGAAGCTGGCAAGGTGTCCGCAGAG------TCC---GCGCCGGAGGCTGTT---CAG---AAG---TCG---TTC---AGC---ACGATG---CGTATGATTGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GM------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-S-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927263 [IV-Proteo4-BAC17H08] PRGD_OTU007_2243ed189ff47178d9e87090e30f7a33 gb|KJ927263| PRGD_OTU007_2243ed189ff47178d9e87090e30f7a33, putative proteorhodopsin gene, partial cds. PRGD_OTU007_2243ed189ff47178d9e87090e30f7a33, putative proteorhodopsin gene, partial cds. KJ927263 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCTGCGGTGGCGGTTGTGAGCGCCGGTATGTTCTGGCGCTTGATGATCGGCTCTCTGGTAATGCTGGTTGCTGGTTACCTTGGTGAAGCAGGCCTTGTGAATGCATGGCTCGGCTTTGTTGTAGGTATGGCCGGATGGGCATACATCCTCTACGAGATCTTTGCTGGTGAAGCTGGCAAGGTGTCTGCAGAGTCCGCGCCGGAGGCTGTTCAGAAGTCGTTTAGCACGATGCGTATGATCGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGMFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFSTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCTGCG---------GTG---GCGGTTGTGAGCGCC---GGTATG------------------------------------TTCTGGCGC---TTGATGATCGGCTCTCTGGTAATGCTGGTTGCTGGTTACCTTGGTGAA---------GCA------------------GGC------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTTGTAGGTATGGCCGGATGGGCATACATCCTCTACGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTGTCTGCAGAG------TCC---GCGCCGGAGGCTGTT---CAG---AAG---TCG---TTT---AGC---ACGATG---CGTATGATCGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GM------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-S-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927281 [IV-Proteo4-BAC17H08] PRGD_OTU007_8b5ab5ca8b6933c4ec509011f338cf7b gb|KJ927281| PRGD_OTU007_8b5ab5ca8b6933c4ec509011f338cf7b, putative proteorhodopsin gene, partial cds. PRGD_OTU007_8b5ab5ca8b6933c4ec509011f338cf7b, putative proteorhodopsin gene, partial cds. KJ927281 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCAGTGGCTGTTGTTAGCGCTGGTATGTTCTGGCGCTTGATGATCGGTTCGCTGGTAATGCTGGTTGCTGGTTACCTTGGTGAAGCAGGCCTTGTGAATGCATGGCTCGGCTTTGTCGTAGGTATGGCCGGATGGGCATACATCCTCTACGAGATCTTTGCTGGTGAAGCTGGCAAGGTGTCCGCAGAGTCCGCGCCGGAGGCTGTTCAGAAGTCGTTCAGCACGATGCGTATGATCGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGMFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFSTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTCATCCTGGCGGCA---------GTG---GCTGTTGTTAGCGCT---GGTATG------------------------------------TTCTGGCGC---TTGATGATCGGTTCGCTGGTAATGCTGGTTGCTGGTTACCTTGGTGAA---------GCA------------------GGC------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTCGTAGGTATGGCCGGATGGGCATACATCCTCTACGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTGTCCGCAGAG------TCC---GCGCCGGAGGCTGTT---CAG---AAG---TCG---TTC---AGC---ACGATG---CGTATGATCGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GM------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-S-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927280 [IV-Proteo4-BAC17H08] PRGD_OTU007_895808e4353960cefbb13421e16197fc gb|KJ927280| PRGD_OTU007_895808e4353960cefbb13421e16197fc, putative proteorhodopsin gene, partial cds. PRGD_OTU007_895808e4353960cefbb13421e16197fc, putative proteorhodopsin gene, partial cds. KJ927280 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) TTAATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTTATTCTGGCGGCAGTAGCGGTTGTTAGCGCTGGTATGTTCTGGCGCCTGATGATCGGTTCGCTGGTGATGCTGGTTGCTGGTTACCTTGGCGAAGCAGGCCTTGTTAATGCATGGCTCGGCTTTGTCGTAGGCTTGGCTGGATGGGCATACATCCTGTACGAAATCTTTGCTGGTGAAGCTGGCAAGGTGTCTGCAGAGTCCGCGCCAGAGGCTGTACAGAAGTCGTTCAGCACAATGCGTATGATTGTAACCGTC LITVPLQMVEFYFILAAVAVVSAGMFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGLAGWAYILYEIFAGEAGKVSAESAPEAVQKSFSTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTTATTCTGGCGGCA---------GTA---GCGGTTGTTAGCGCT---GGTATG------------------------------------TTCTGGCGC---CTGATGATCGGTTCGCTGGTGATGCTGGTTGCTGGTTACCTTGGCGAA---------GCA------------------GGC------CTT---------------------------------GTT------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTCGTAGGCTTGGCTGGATGGGCATACATCCTGTACGAAATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTGTCTGCAGAG------TCC---GCGCCAGAGGCTGTA---CAG---AAG---TCG---TTC---AGC---ACAATG---CGTATGATTGTAACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GM------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGLAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-S-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927266 [IV-Proteo4-BAC17H08] PRGD_OTU007_36740be20d566eae75643c846adafe13 gb|KJ927266| PRGD_OTU007_36740be20d566eae75643c846adafe13, putative proteorhodopsin gene, partial cds. PRGD_OTU007_36740be20d566eae75643c846adafe13, putative proteorhodopsin gene, partial cds. KJ927266 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937) TTGATCACTGTGCCGCTTCAGATGGTAGAATTCTACTTCATCCTGGCAGCAGTAGCGGTTGTTAGCGCTGGTATGTTCTGGCGCCTGATGATTGGTTCGCTGGTAATGCTGGTTGCTGGTTACCTGGGCGAAGCTGGCCTTGTGAATGCATGGCTTGGCTTTATCGTTGGCTTGGCTGGATGGGCATACATCCTCTACGAAATCTTTGCTGGTGAAGCTGGCAAGGTGTCGGCAGAGTCCGCGCCGGAAGCTGTTCAGAAGTCGTTCAGCACGATGCGTATGATCGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGMFWRLMIGSLVMLVAGYLGEAGLVNAWLGFIVGLAGWAYILYEIFAGEAGKVSAESAPEAVQKSFSTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCGCTTCAGATGGTAGAATTCTACTTCATCCTGGCAGCA---------GTA---GCGGTTGTTAGCGCT---GGTATG------------------------------------TTCTGGCGC---CTGATGATTGGTTCGCTGGTAATGCTGGTTGCTGGTTACCTGGGCGAA---------GCT------------------GGC------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTTGGC---TTTATCGTTGGCTTGGCTGGATGGGCATACATCCTCTACGAAATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTGTCGGCAGAG------TCC---GCGCCGGAAGCTGTT---CAG---AAG---TCG---TTC---AGC---ACGATG---CGTATGATCGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GM------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FIVGLAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-S-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927308 [IV-Proteo4-BAC17H08] PRGD_OTU007_eea4d154a0707ccc87cd934603a7b815 gb|KJ927308| PRGD_OTU007_eea4d154a0707ccc87cd934603a7b815, putative proteorhodopsin gene, partial cds. PRGD_OTU007_eea4d154a0707ccc87cd934603a7b815, putative proteorhodopsin gene, partial cds. KJ927308 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTGATCACTGTTCCGCTTCAGATGGTAGAATTCTACTTCATCCTGGCGGCAGTGGCTGTGGTCAGCGCTGGTATGTTCTGGCGCCTGATGATCGGTTCGCTGGTAATGCTGGTTGCTGGTTACCTTGGTGAGGCAGGCCTTGTGAATGCATGGCTTGGCTTTATCGTTGGCTTGGCTGGATGGGCATACATCCTGTACGAGATCTTCGCTGGTGAAGCTGGCAAGGTATCCGCGGAATCCGCGCCGGAAGCTGTTCAAAAGTCCTTCGGTACAATGCGTCTGATTGTAACCGTC LITVPLQMVEFYFILAAVAVVSAGMFWRLMIGSLVMLVAGYLGEAGLVNAWLGFIVGLAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTTCCGCTTCAGATGGTAGAATTCTACTTCATCCTGGCGGCA---------GTG---GCTGTGGTCAGCGCT---GGTATG------------------------------------TTCTGGCGC---CTGATGATCGGTTCGCTGGTAATGCTGGTTGCTGGTTACCTTGGTGAG---------GCA------------------GGC------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTTGGC---TTTATCGTTGGCTTGGCTGGATGGGCATACATCCTGTACGAGATC---------------TTC------GCT---GGTGAAGCTGGCAAGGTATCCGCGGAA------TCC---GCGCCGGAAGCTGTT---CAA---AAG---TCC---TTC---GGT---ACAATG---CGTCTGATTGTAACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GM------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FIVGLAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927288 [IV-Proteo4-BAC17H08] PRGD_OTU007_aa925dee0c0754fd111b792ad71ebb35 gb|KJ927288| PRGD_OTU007_aa925dee0c0754fd111b792ad71ebb35, putative proteorhodopsin gene, partial cds. PRGD_OTU007_aa925dee0c0754fd111b792ad71ebb35, putative proteorhodopsin gene, partial cds. KJ927288 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTAATTACTGTTCCGCTACAGATGGTAGAATTCTACTTTATCCTGGCGGCAGTAGCGGTTGTTAGCGCTGGTATGTTCTGGCGCCTTATGATCGGTTCGCTGGTAATGCTGGTTGCCGGTTACCTTGGTGAAGCAGGCCTTGTGAATGCATGGCTTGGCTTTATCGTTGGCTTGGCTGGATGGGCGTACATCCTGTACGAAATCTTCGCTGGTGAAGCTGGCAAGGTGTCGGCAGAGTCCGCTCCGGAAGCTGTCCAAAAATCCTTCGGTACAATGCGTCTGATCGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGMFWRLMIGSLVMLVAGYLGEAGLVNAWLGFIVGLAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTTCCGCTACAGATGGTAGAATTCTACTTTATCCTGGCGGCA---------GTA---GCGGTTGTTAGCGCT---GGTATG------------------------------------TTCTGGCGC---CTTATGATCGGTTCGCTGGTAATGCTGGTTGCCGGTTACCTTGGTGAA---------GCA------------------GGC------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTTGGC---TTTATCGTTGGCTTGGCTGGATGGGCGTACATCCTGTACGAAATC---------------TTC------GCT---GGTGAAGCTGGCAAGGTGTCGGCAGAG------TCC---GCTCCGGAAGCTGTC---CAA---AAA---TCC---TTC---GGT---ACAATG---CGTCTGATCGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GM------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FIVGLAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927306 [IV-Proteo4-BAC17H08] PRGD_OTU007_e8bd10b74bc6d3cb944a65c9348e8b3b gb|KJ927306| PRGD_OTU007_e8bd10b74bc6d3cb944a65c9348e8b3b, putative proteorhodopsin gene, partial cds. PRGD_OTU007_e8bd10b74bc6d3cb944a65c9348e8b3b, putative proteorhodopsin gene, partial cds. KJ927306 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTTATCCTGGCGGCAGTAGCAGTTGTTAGTGCTGGTATGTTCTGGCGCCTGATGATCGGTTCGCTGGTAATGCTGGTTGCTGGTTACCTTGGTGAAGCAGGCCTTGTGAATGCATGGCTTGGCTTTATCGTTGGCTTGGCTGGATGGGCATACATCCTTTACGAGATCTTCGCTGGTGAAGCTGGCAAGGTGTCGGCAGAGTCCGCTCCGGAAGCTGTTCAAAAGTCCTTCGGTACAATGCGTCTGATTGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGMFWRLMIGSLVMLVAGYLGEAGLVNAWLGFIVGLAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTTCCGCTCCAGATGGTAGAATTCTACTTTATCCTGGCGGCA---------GTA---GCAGTTGTTAGTGCT---GGTATG------------------------------------TTCTGGCGC---CTGATGATCGGTTCGCTGGTAATGCTGGTTGCTGGTTACCTTGGTGAA---------GCA------------------GGC------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTTGGC---TTTATCGTTGGCTTGGCTGGATGGGCATACATCCTTTACGAGATC---------------TTC------GCT---GGTGAAGCTGGCAAGGTGTCGGCAGAG------TCC---GCTCCGGAAGCTGTT---CAA---AAG---TCC---TTC---GGT---ACAATG---CGTCTGATTGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GM------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FIVGLAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927270 [IV-Proteo4-BAC17H08] PRGD_OTU007_4cf69b2cde8433ce9441563cae6f3a77 gb|KJ927270| PRGD_OTU007_4cf69b2cde8433ce9441563cae6f3a77, putative proteorhodopsin gene, partial cds. PRGD_OTU007_4cf69b2cde8433ce9441563cae6f3a77, putative proteorhodopsin gene, partial cds. KJ927270 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATCACTGTTCCGCTTCAGATGGTAGAATTCTACTTCATCCTGGCGGCTGTGGCTGTTGTCAGCGCCGGTATCTTCTGGCGTCTGATGATCGGTTCGCTGGTCATGCTGGTTGCCGGTTATCTCGGCGAGGCAGGCCTTGTGAATGCATGGCTCGGCTTTGTCGTAGGCATGGCAGGATGGGCGTACATCCTGTACGAGATCTTCGCTGGTGAAGCCGGCAAGGTGTCTGCAGAGTCCGCTCCGGAGGCTGTCCAGAAGTCGTTCGGCACGATGCGTATGATCGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTTCCGCTTCAGATGGTAGAATTCTACTTCATCCTGGCGGCT---------GTG---GCTGTTGTCAGCGCC---GGTATC------------------------------------TTCTGGCGT---CTGATGATCGGTTCGCTGGTCATGCTGGTTGCCGGTTATCTCGGCGAG---------GCA------------------GGC------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTCGTAGGCATGGCAGGATGGGCGTACATCCTGTACGAGATC---------------TTC------GCT---GGTGAAGCCGGCAAGGTGTCTGCAGAG------TCC---GCTCCGGAGGCTGTC---CAG---AAG---TCG---TTC---GGC---ACGATG---CGTATGATCGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927310 [IV-Proteo4-BAC17H08] PRGD_OTU007_f7eb0039c68b98afaeee26a6b0bb7fa2 gb|KJ927310| PRGD_OTU007_f7eb0039c68b98afaeee26a6b0bb7fa2, putative proteorhodopsin gene, partial cds. PRGD_OTU007_f7eb0039c68b98afaeee26a6b0bb7fa2, putative proteorhodopsin gene, partial cds. KJ927310 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Mediterranean Sea (33.935, 18.508), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTGATCACTGTTCCGCTTCAGATGGTAGAATTCTACTTCATCCTGGCGGCTGTGGCTGTTGTCAGCGCCGGCATCTTCTGGCGTCTGATGATCGGTTCGCTGGTCATGCTGGTTGCCGGTTATCTCGGCGAGGCAGGCCTTGTGAATGCATGGCTCGGCTTTGTGGTAGGCATGGCCGGATGGGCGTACATCCTGTACGAGATCTTCGCTGGTGAAGCCGGCAAGGTGTCTGCAGAGTCGGCTCCGGAGGCTGTCCAGAAGTCGTTCGGCACGATGCGTATGATTGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTTCCGCTTCAGATGGTAGAATTCTACTTCATCCTGGCGGCT---------GTG---GCTGTTGTCAGCGCC---GGCATC------------------------------------TTCTGGCGT---CTGATGATCGGTTCGCTGGTCATGCTGGTTGCCGGTTATCTCGGCGAG---------GCA------------------GGC------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTGGTAGGCATGGCCGGATGGGCGTACATCCTGTACGAGATC---------------TTC------GCT---GGTGAAGCCGGCAAGGTGTCTGCAGAG------TCG---GCTCCGGAGGCTGTC---CAG---AAG---TCG---TTC---GGC---ACGATG---CGTATGATTGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927307 [IV-Proteo4-BAC17H08] PRGD_OTU007_ee4ea558a5e431aa2cd251bfbaa92340 gb|KJ927307| PRGD_OTU007_ee4ea558a5e431aa2cd251bfbaa92340, putative proteorhodopsin gene, partial cds. PRGD_OTU007_ee4ea558a5e431aa2cd251bfbaa92340, putative proteorhodopsin gene, partial cds. KJ927307 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTGATCACTGTTCCGCTTCAGATGGTAGAATTCTACTTCATCCTGGCGGCTGTGGCTGTTGTCAGCGCCGGCATCTTCTGGCGTCTGATGATCGGTTCGCTGGTCATGCTGGTTGCCGGTTATCTTGGCGAGGCAGGCCTTGTGAATGCATGGCTCGGCTTTGTCGTAGGCATGGCCGGATGGGCGTACATCCTGTACGAGATCTTCGCTGGTGAAGCCGGCAAGGTGTCTGCAGAGTCCGCTCCGGAGGCTGTCCAGAAGTCTTTCGGCACGATGCGTATGATCGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTTCCGCTTCAGATGGTAGAATTCTACTTCATCCTGGCGGCT---------GTG---GCTGTTGTCAGCGCC---GGCATC------------------------------------TTCTGGCGT---CTGATGATCGGTTCGCTGGTCATGCTGGTTGCCGGTTATCTTGGCGAG---------GCA------------------GGC------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTCGTAGGCATGGCCGGATGGGCGTACATCCTGTACGAGATC---------------TTC------GCT---GGTGAAGCCGGCAAGGTGTCTGCAGAG------TCC---GCTCCGGAGGCTGTC---CAG---AAG---TCT---TTC---GGC---ACGATG---CGTATGATCGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927303 [IV-Proteo4-BAC17H08] PRGD_OTU007_e17e334f45dadc653a7074464d24795b gb|KJ927303| PRGD_OTU007_e17e334f45dadc653a7074464d24795b, putative proteorhodopsin gene, partial cds. PRGD_OTU007_e17e334f45dadc653a7074464d24795b, putative proteorhodopsin gene, partial cds. KJ927303 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) CTGATCACTGTTCCGCTTCAGATGGTAGAATTCTACTTCATCCTGGCGGCTGTGGCTGTTGTCAGCGCCGGCATCTTCTGGCGTCTGATGATCGGTTCGTTGGTCATGCTGGTTGCCGGTTATCTCGGCGAGGCAGGCCTTGTGAATGCATGGCTCGGCTTTGTCGTGGGCATGGCCGGATGGGCATACATCCTGTACGAGATCTTCGCTGGTGAAGCCGGCAAGGTGTCTGCAGAGTCCGCTCCGGAGGCTGTCCAGAAGTCGTTCGGCACGATGCGTATGATCGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTTCCGCTTCAGATGGTAGAATTCTACTTCATCCTGGCGGCT---------GTG---GCTGTTGTCAGCGCC---GGCATC------------------------------------TTCTGGCGT---CTGATGATCGGTTCGTTGGTCATGCTGGTTGCCGGTTATCTCGGCGAG---------GCA------------------GGC------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTCGTGGGCATGGCCGGATGGGCATACATCCTGTACGAGATC---------------TTC------GCT---GGTGAAGCCGGCAAGGTGTCTGCAGAG------TCC---GCTCCGGAGGCTGTC---CAG---AAG---TCG---TTC---GGC---ACGATG---CGTATGATCGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927290 [IV-Proteo4-BAC17H08] PRGD_OTU007_b216855f3d1f6d7ef00fc1fb3ed3c774 gb|KJ927290| PRGD_OTU007_b216855f3d1f6d7ef00fc1fb3ed3c774, putative proteorhodopsin gene, partial cds. PRGD_OTU007_b216855f3d1f6d7ef00fc1fb3ed3c774, putative proteorhodopsin gene, partial cds. KJ927290 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTGATCACCGTTCCGCTTCAAATGGTGGAATTCTACTTCATCCTGGCGGCAGTCGCCGCAGTCAGCGCCGGCATCTTCTGGCGTCTGATGATCGGCTCGCTGGTCATGCTTGTGGCTGGTTACCTCGGTGAGGCAGGCCTTGTGAATGCATGGCTCGGCTTCGTCGTCGGTATGGCAGGATGGGCTTACATTCTGTACGAAATCTTCGCTGGTGAAGCTGGCAAGGTATCTGCCGAATCCGCGCCCGAGGCGGTGCAAAAGTCCTTCGGTACGATGCGTATGATCGTGACCGTG LITVPLQMVEFYFILAAVAAVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTTCCGCTTCAAATGGTGGAATTCTACTTCATCCTGGCGGCA---------GTC---GCCGCAGTCAGCGCC---GGCATC------------------------------------TTCTGGCGT---CTGATGATCGGCTCGCTGGTCATGCTTGTGGCTGGTTACCTCGGTGAG---------GCA------------------GGC------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTCGTCGTCGGTATGGCAGGATGGGCTTACATTCTGTACGAAATC---------------TTC------GCT---GGTGAAGCTGGCAAGGTATCTGCCGAA------TCC---GCGCCCGAGGCGGTG---CAA---AAG---TCC---TTC---GGT---ACGATG---CGTATGATCGTGACCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AAVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927275 [IV-Proteo4-BAC17H08] PRGD_OTU007_78160bd6e8b09e995d9e047a0c867c95 gb|KJ927275| PRGD_OTU007_78160bd6e8b09e995d9e047a0c867c95, putative proteorhodopsin gene, partial cds. PRGD_OTU007_78160bd6e8b09e995d9e047a0c867c95, putative proteorhodopsin gene, partial cds. KJ927275 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTGATCACCGTTCCGCTTCAAATGGTGGAATTCTACTTCATCCTGGCGGCAGTCGCCGCAGTCAGCGCCGGCATCTTCTGGCGTCTGATGATCGGCTCGCTGGTTATGCTTGTGGCTGGTTACCTCGGTGAGGCAGGCCTTGTGAATGCATGGCTCGGCTTCGTCGTCGGTATGGCAGGTTGGGCGTACATTCTGTACGAAATCTTCGCTGGTGAAGCTGGCAAGGTATCTGCCGAATCCGCGCCCGAGGCGGTGCAGAAGTCCTTCGGTACGATGCGTATGATCGTGACCGTT LITVPLQMVEFYFILAAVAAVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTTCCGCTTCAAATGGTGGAATTCTACTTCATCCTGGCGGCA---------GTC---GCCGCAGTCAGCGCC---GGCATC------------------------------------TTCTGGCGT---CTGATGATCGGCTCGCTGGTTATGCTTGTGGCTGGTTACCTCGGTGAG---------GCA------------------GGC------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTCGTCGTCGGTATGGCAGGTTGGGCGTACATTCTGTACGAAATC---------------TTC------GCT---GGTGAAGCTGGCAAGGTATCTGCCGAA------TCC---GCGCCCGAGGCGGTG---CAG---AAG---TCC---TTC---GGT---ACGATG---CGTATGATCGTGACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AAVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927289 [IV-Proteo4-BAC17H08] PRGD_OTU007_ac8598009c4e7f276f95c06d73da8f78 gb|KJ927289| PRGD_OTU007_ac8598009c4e7f276f95c06d73da8f78, putative proteorhodopsin gene, partial cds. PRGD_OTU007_ac8598009c4e7f276f95c06d73da8f78, putative proteorhodopsin gene, partial cds. KJ927289 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATCACCGTTCCGCTTCAAATGGTGGAATTCTACTTCATCCTGGCGGCAGTCGCTGCAGTCAGCGCCGGCATCTTCTGGCGTCTGATGATCGGCTCGCTGGTCATGCTTGTGGCTGGTTACCTCGGTGAGGCAGGCCTTGTGAATGCATGGCTCGGCTTCGTCGTCGGTATGGCAGGATGGGCGTACATTCTGTACGAGATCTTCGCTGGTGAAGCCGGCAAGGTATCTGCCGAATCCGCGCCCGAGGCGGTGCAGAAGTCCTTCGGTACGATGCGTATGATCGTGACCGTT LITVPLQMVEFYFILAAVAAVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTTCCGCTTCAAATGGTGGAATTCTACTTCATCCTGGCGGCA---------GTC---GCTGCAGTCAGCGCC---GGCATC------------------------------------TTCTGGCGT---CTGATGATCGGCTCGCTGGTCATGCTTGTGGCTGGTTACCTCGGTGAG---------GCA------------------GGC------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTCGTCGTCGGTATGGCAGGATGGGCGTACATTCTGTACGAGATC---------------TTC------GCT---GGTGAAGCCGGCAAGGTATCTGCCGAA------TCC---GCGCCCGAGGCGGTG---CAG---AAG---TCC---TTC---GGT---ACGATG---CGTATGATCGTGACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AAVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927254 [IV-Proteo4-BAC17H08] PRGD_OTU007_12f6e14b31cf6be7b8a2e2bcac51a63e gb|KJ927254| PRGD_OTU007_12f6e14b31cf6be7b8a2e2bcac51a63e, putative proteorhodopsin gene, partial cds. PRGD_OTU007_12f6e14b31cf6be7b8a2e2bcac51a63e, putative proteorhodopsin gene, partial cds. KJ927254 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATAACCGTGCCTCTCCAAATGGTTGAATTCTACTTCATTCTAGCGGCAGTTGCAGTTGTCAGCGCTGGCATTTTTTGGCGCCTGATGATTGGCTCTTTGGTAATGCTTGTCGCTGGTTACCTCGGCGAAGCAGGTCTCGTGAACGCTTGGCTTGGCTTTGCCGTTGGTATGGCGGGATGGGCATACATCTTGTATGAGATTTTTGCCGGTGAAGCAGGAAGGGTATCTGCGGAGTCCGCTCCAGAGGCCGTCCAGAAGTCTTTCGGTACGATGCGGTTAATCGTTACCGTT LITVPLQMVEFYFILAAVAVVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFAVGMAGWAYILYEIFAGEAGRVSAESAPEAVQKSFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATAACCGTGCCTCTCCAAATGGTTGAATTCTACTTCATTCTAGCGGCA---------GTT---GCAGTTGTCAGCGCT---GGCATT------------------------------------TTTTGGCGC---CTGATGATTGGCTCTTTGGTAATGCTTGTCGCTGGTTACCTCGGCGAA---------GCA------------------GGT------CTC---------------------------------GTG------------------------------------------------------------------AACGCT------------------TGGCTTGGC---TTTGCCGTTGGTATGGCGGGATGGGCATACATCTTGTATGAGATT---------------TTT------GCC---GGTGAAGCAGGAAGGGTATCTGCGGAG------TCC---GCTCCAGAGGCCGTC---CAG---AAG---TCT---TTC---GGT---ACGATG---CGGTTAATCGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FAVGMAGWAYILYEI-----F--A-GEAGRVSAE--S-APEAV-Q-K-S-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927286 [IV-Proteo4-BAC17H08] PRGD_OTU007_9f2c4cc14eb62fe571ec576e1034ce3a gb|KJ927286| PRGD_OTU007_9f2c4cc14eb62fe571ec576e1034ce3a, putative proteorhodopsin gene, partial cds. PRGD_OTU007_9f2c4cc14eb62fe571ec576e1034ce3a, putative proteorhodopsin gene, partial cds. KJ927286 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) CTAATAACCGTGCCTCTCCAAATGGTTGAATTCTACTTCATTCTAGCGGCAGTCGCAGTTGTCAGCGCTGGCATTTTTTGGCGCCTGATGATTGGCTCTTTGGTAATGCTTGTCGCTGGTTACCTCGGCGAAGCAGGTCTCGTGAACGCTTGGCTTGGCTTTGTCGTTGGTATGGCGGGATGGGCATACATCTTGTATGAGATTTTTGCCGGTGAAGCAGGAAGGGTATCTGCGGAGTCCGCTCCGGAGGCCGTCCAGAAGTCTTTTGGTACGATGCGGTTAATCGTTACCGTT LITVPLQMVEFYFILAAVAVVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGRVSAESAPEAVQKSFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATAACCGTGCCTCTCCAAATGGTTGAATTCTACTTCATTCTAGCGGCA---------GTC---GCAGTTGTCAGCGCT---GGCATT------------------------------------TTTTGGCGC---CTGATGATTGGCTCTTTGGTAATGCTTGTCGCTGGTTACCTCGGCGAA---------GCA------------------GGT------CTC---------------------------------GTG------------------------------------------------------------------AACGCT------------------TGGCTTGGC---TTTGTCGTTGGTATGGCGGGATGGGCATACATCTTGTATGAGATT---------------TTT------GCC---GGTGAAGCAGGAAGGGTATCTGCGGAG------TCC---GCTCCGGAGGCCGTC---CAG---AAG---TCT---TTT---GGT---ACGATG---CGGTTAATCGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGRVSAE--S-APEAV-Q-K-S-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927298 [IV-Proteo4-BAC17H08] PRGD_OTU007_d59da2a10c705b9c9c38293ca33f758d gb|KJ927298| PRGD_OTU007_d59da2a10c705b9c9c38293ca33f758d, putative proteorhodopsin gene, partial cds. PRGD_OTU007_d59da2a10c705b9c9c38293ca33f758d, putative proteorhodopsin gene, partial cds. KJ927298 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-33.28, 45.35) CTAATAACCGTGCCTCTCCAGATGGTTGAATTCTACTTCATTCTAGCAGCAGTCGCAGTTGTCAGCGCTGGCATTTTTTGGCGCCTGATGATTGGCTCGCTGGTAATGCTTGTCGCTGGTTACCTCGGCGAAGCAGGTCTCGTGAACGCTTGGCTTGGCTTTGCCGTTGGTATGGCGGGATGGGCATACATCTTGTATGAGATTTTTGCCGGTGAAGCAGGAAGGGTATCTGCGGAGTCCGCTCCGGAGGCCGTCCAGAAGTCTTTCGGTACGATGCGGTTAATCGTTACCGTT LITVPLQMVEFYFILAAVAVVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFAVGMAGWAYILYEIFAGEAGRVSAESAPEAVQKSFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATAACCGTGCCTCTCCAGATGGTTGAATTCTACTTCATTCTAGCAGCA---------GTC---GCAGTTGTCAGCGCT---GGCATT------------------------------------TTTTGGCGC---CTGATGATTGGCTCGCTGGTAATGCTTGTCGCTGGTTACCTCGGCGAA---------GCA------------------GGT------CTC---------------------------------GTG------------------------------------------------------------------AACGCT------------------TGGCTTGGC---TTTGCCGTTGGTATGGCGGGATGGGCATACATCTTGTATGAGATT---------------TTT------GCC---GGTGAAGCAGGAAGGGTATCTGCGGAG------TCC---GCTCCGGAGGCCGTC---CAG---AAG---TCT---TTC---GGT---ACGATG---CGGTTAATCGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FAVGMAGWAYILYEI-----F--A-GEAGRVSAE--S-APEAV-Q-K-S-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927256 [IV-Proteo4-BAC17H08] PRGD_OTU007_16173ea6aaf626d3859c28ebf3de19fb gb|KJ927256| PRGD_OTU007_16173ea6aaf626d3859c28ebf3de19fb, putative proteorhodopsin gene, partial cds. PRGD_OTU007_16173ea6aaf626d3859c28ebf3de19fb, putative proteorhodopsin gene, partial cds. KJ927256 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTAATAACCGTGCCTCTCCAAATGGTTGAATTCTACTTCATTCTAGCGGCAGTCGCAGTTGTCAGCGCTGGTATTTTTTGGCGCCTGATGATTGGCTCGCTGGTAATGCTTGTCGCTGGTTACCTCGGCGAAGCAGGTCTCGTGAACGCTTGGCTTGGCTTTGTCGTTGGTATGGCGGGATGGGCATACATCTTGTATGAGATTTTTGCCGGTGAAGCAGGAAGGGTATCTGCGGAGTCCGCTCCGGAGGCCGTTCAGAAGTCTTTCGGTACGATGCGGTTAATCGTTACCGTT LITVPLQMVEFYFILAAVAVVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGRVSAESAPEAVQKSFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATAACCGTGCCTCTCCAAATGGTTGAATTCTACTTCATTCTAGCGGCA---------GTC---GCAGTTGTCAGCGCT---GGTATT------------------------------------TTTTGGCGC---CTGATGATTGGCTCGCTGGTAATGCTTGTCGCTGGTTACCTCGGCGAA---------GCA------------------GGT------CTC---------------------------------GTG------------------------------------------------------------------AACGCT------------------TGGCTTGGC---TTTGTCGTTGGTATGGCGGGATGGGCATACATCTTGTATGAGATT---------------TTT------GCC---GGTGAAGCAGGAAGGGTATCTGCGGAG------TCC---GCTCCGGAGGCCGTT---CAG---AAG---TCT---TTC---GGT---ACGATG---CGGTTAATCGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGRVSAE--S-APEAV-Q-K-S-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927305 [IV-Proteo4-BAC17H08] PRGD_OTU007_e8958b4ce26d20242a712b6a6229b7bd gb|KJ927305| PRGD_OTU007_e8958b4ce26d20242a712b6a6229b7bd, putative proteorhodopsin gene, partial cds. PRGD_OTU007_e8958b4ce26d20242a712b6a6229b7bd, putative proteorhodopsin gene, partial cds. KJ927305 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.935 18.508 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937), Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) CTAATAACCGTGCCTCTCCAAATGGTTGAATTCTACTTCATTCTAGCGGCAGTCGCAGTTGTCAGCGCTGGCATTTTTTGGCGCCTGATGATTGGGTCGCTGGTAATGCTTGTCGCTGGTTACCTCGGCGAAGCAGGTCTCGTGAACGCTTGGCTTGGCTTTGTCGTTGGCATGGCGGGATGGGCATACATCTTGTATGAGATTTTTGCCGGTGAAGCAGGAAGGGTATCTGCGGAGTCCGCTCCGGAGGCCGTCCAGAAGTCTTTCGGTACGATGCGGTTAATCGTTACCGTT LITVPLQMVEFYFILAAVAVVSAGIFWRLMIGSLVMLVAGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGRVSAESAPEAVQKSFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATAACCGTGCCTCTCCAAATGGTTGAATTCTACTTCATTCTAGCGGCA---------GTC---GCAGTTGTCAGCGCT---GGCATT------------------------------------TTTTGGCGC---CTGATGATTGGGTCGCTGGTAATGCTTGTCGCTGGTTACCTCGGCGAA---------GCA------------------GGT------CTC---------------------------------GTG------------------------------------------------------------------AACGCT------------------TGGCTTGGC---TTTGTCGTTGGCATGGCGGGATGGGCATACATCTTGTATGAGATT---------------TTT------GCC---GGTGAAGCAGGAAGGGTATCTGCGGAG------TCC---GCTCCGGAGGCCGTC---CAG---AAG---TCT---TTC---GGT---ACGATG---CGGTTAATCGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGRVSAE--S-APEAV-Q-K-S-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927258 [IV-Proteo4-BAC17H08] PRGD_OTU007_188a630d5a51870273e6a0a26d14bf8c gb|KJ927258| PRGD_OTU007_188a630d5a51870273e6a0a26d14bf8c, putative proteorhodopsin gene, partial cds. PRGD_OTU007_188a630d5a51870273e6a0a26d14bf8c, putative proteorhodopsin gene, partial cds. KJ927258 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.935 18.508 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTGATAACCGTTCCGCTCCAGATGGTTGAATTCTACTTCATCCTGGCTGCAGTGGCCGTTGTCAGCGCCGGCATCTTCTGGCGTCTGATGGTTGGTTCGCTGGTCATGCTGGTCGGCGGTTACCTTGGCGAAGCAGGTCTTGTTAACGCATGGCTTGGCTTCGTGGTCGGCATGGCAGGATGGGCATACATCCTGTACGAGATCTTTGCCGGTGAAGCAGGCAAGGTATCCGCGTCATCCGCTCCGGAGGCAGTCCAGAAGTCGTTTGGCACGATGCGTATGATCGTGACCGTC LITVPLQMVEFYFILAAVAVVSAGIFWRLMVGSLVMLVGGYLGEAGLVNAWLGFVVGMAGWAYILYEIFAGEAGKVSASSAPEAVQKSFGTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTTCCGCTCCAGATGGTTGAATTCTACTTCATCCTGGCTGCA---------GTG---GCCGTTGTCAGCGCC---GGCATC------------------------------------TTCTGGCGT---CTGATGGTTGGTTCGCTGGTCATGCTGGTCGGCGGTTACCTTGGCGAA---------GCA------------------GGT------CTT---------------------------------GTT------------------------------------------------------------------AACGCA------------------TGGCTTGGC---TTCGTGGTCGGCATGGCAGGATGGGCATACATCCTGTACGAGATC---------------TTT------GCC---GGTGAAGCAGGCAAGGTATCCGCGTCA------TCC---GCTCCGGAGGCAGTC---CAG---AAG---TCG---TTT---GGC---ACGATG---CGTATGATCGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMVGSLVMLVGGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWAYILYEI-----F--A-GEAGKVSAS--S-APEAV-Q-K-S-F-G-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ927268 [IV-Proteo4-BAC17H08] PRGD_OTU007_41b2d12ceeab9efbc64bc30b3d7b9a36 gb|KJ927268| PRGD_OTU007_41b2d12ceeab9efbc64bc30b3d7b9a36, putative proteorhodopsin gene, partial cds. PRGD_OTU007_41b2d12ceeab9efbc64bc30b3d7b9a36, putative proteorhodopsin gene, partial cds. KJ927268 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATCACCGTTCCGCTCCAGATGGTTGAATTCTACTTCATCCTGGCTGCAGTGGCCGTTGTCAGCGCCGGTATCTTCTGGCGTCTGATGGTTGGTTCGCTGGTCATGCTGGTCGCCGGTTACCTTGGCGAAGCAGGTCTTGTGAACGCATGGCTTGGCTTCGTCGTCGGGTTGGCAGGATGGGCATACATCCTGTATGAGATCTTTGCCGGTGAAGCAGGCAAGGTATCCGCGGAATCCGCTCCGGAGGCAGTCCAGAAGTCGTTTGGCACGATGCGTATGATCGTGACAGTC LITVPLQMVEFYFILAAVAVVSAGIFWRLMVGSLVMLVAGYLGEAGLVNAWLGFVVGLAGWAYILYEIFAGEAGKVSAESAPEAVQKSFGTMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACCGTTCCGCTCCAGATGGTTGAATTCTACTTCATCCTGGCTGCA---------GTG---GCCGTTGTCAGCGCC---GGTATC------------------------------------TTCTGGCGT---CTGATGGTTGGTTCGCTGGTCATGCTGGTCGCCGGTTACCTTGGCGAA---------GCA------------------GGT------CTT---------------------------------GTG------------------------------------------------------------------AACGCA------------------TGGCTTGGC---TTCGTCGTCGGGTTGGCAGGATGGGCATACATCCTGTATGAGATC---------------TTT------GCC---GGTGAAGCAGGCAAGGTATCCGCGGAA------TCC---GCTCCGGAGGCAGTC---CAG---AAG---TCG---TTT---GGC---ACGATG---CGTATGATCGTGACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LMVGSLVMLVAGYLGE---A------G--L-----------V----------------------NA------WLG-FVVGLAGWAYILYEI-----F--A-GEAGKVSAE--S-APEAV-Q-K-S-F-G-TM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ926717 [IV-Proteo4-BAC17H08] PRGD_OTU002b_otuREP_612f30974451cbf8b789ca3eaadb008f gb|KJ926717| PRGD_OTU002b_otuREP_612f30974451cbf8b789ca3eaadb008f, putative proteorhodopsin gene, partial cds. PRGD_OTU002b_otuREP_612f30974451cbf8b789ca3eaadb008f, putative proteorhodopsin gene, partial cds. KJ926717 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.935 18.508 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTTATTACTGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTTGCTGCTGTTGCAGTTGTGAGTGGTGGCATCTTCTGGCGGCTGCTTATTGGCTCGCTTGTCATGCTGGTAGCTGGTTACGCCGGTGAGGCCGGACTGGTGAATGCTTGGCTTGGTTTTGTTGTCGGAATGGCAGGCTGGTTCTACATTCTGTATGAAATCTTTGCGGGCGAAGCTGGCAAAGCATCAGCAGAGCAGGCTCCGGCGTCGGTGCAGTCAGCGTTCTCAACAATGCGCTGGATCGTGACGATC LITVPLQMVEFYFILAAVAVVSGGIFWRLLIGSLVMLVAGYAGEAGLVNAWLGFVVGMAGWFYILYEIFAGEAGKASAEQAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATTACTGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTTGCTGCT---------GTT---GCAGTTGTGAGTGGT---GGCATC------------------------------------TTCTGGCGG---CTGCTTATTGGCTCGCTTGTCATGCTGGTAGCTGGTTACGCCGGTGAG---------GCC------------------GGA------CTG---------------------------------GTG------------------------------------------------------------------AATGCT------------------TGGCTTGGT---TTTGTTGTCGGAATGGCAGGCTGGTTCTACATTCTGTATGAAATC---------------TTT------GCG---GGCGAAGCTGGCAAAGCATCAGCAGAG------CAG---GCTCCGGCGTCGGTG---CAG---TCA---GCG---TTC---TCA---ACAATG---CGCTGGATCGTGACGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSG-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWFYILYEI-----F--A-GEAGKASAE--Q-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ926728 [IV-Proteo4-BAC17H08] PRGD_OTU002b_999c632e115f4e953146035ceed888c6 gb|KJ926728| PRGD_OTU002b_999c632e115f4e953146035ceed888c6, putative proteorhodopsin gene, partial cds. PRGD_OTU002b_999c632e115f4e953146035ceed888c6, putative proteorhodopsin gene, partial cds. KJ926728 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTATCACTGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTTGCTGCTGTTGCAGTTGTGAGTGGTGGCATCTTCTGGCGGCTGCTTATTGGTTCGCTTGTCATGCTGGTAGCTGGTTACGCCGGTGAGGCTGGACTGGTGAATGCTTGGCTTGGTTTTGTTGTCGGAATGGCAGGCTGGTTCTACATTCTGTATGAGATCTTTGCGGGCGAAGCTGGCAAAGCATCAGCAGAGCAGGCTCCGGCGTCGGTGCAGTCGGCGTTCTCAACAATGCGATGGATCGTGACGATC LITVPLQMVEFYFILAAVAVVSGGIFWRLLIGSLVMLVAGYAGEAGLVNAWLGFVVGMAGWFYILYEIFAGEAGKASAEQAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATCACTGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTTGCTGCT---------GTT---GCAGTTGTGAGTGGT---GGCATC------------------------------------TTCTGGCGG---CTGCTTATTGGTTCGCTTGTCATGCTGGTAGCTGGTTACGCCGGTGAG---------GCT------------------GGA------CTG---------------------------------GTG------------------------------------------------------------------AATGCT------------------TGGCTTGGT---TTTGTTGTCGGAATGGCAGGCTGGTTCTACATTCTGTATGAGATC---------------TTT------GCG---GGCGAAGCTGGCAAAGCATCAGCAGAG------CAG---GCTCCGGCGTCGGTG---CAG---TCG---GCG---TTC---TCA---ACAATG---CGATGGATCGTGACGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSG-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWFYILYEI-----F--A-GEAGKASAE--Q-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ926731 [IV-Proteo4-BAC17H08] PRGD_OTU002b_b7f770552f14f7cb14e3e14c3b6e202c gb|KJ926731| PRGD_OTU002b_b7f770552f14f7cb14e3e14c3b6e202c, putative proteorhodopsin gene, partial cds. PRGD_OTU002b_b7f770552f14f7cb14e3e14c3b6e202c, putative proteorhodopsin gene, partial cds. KJ926731 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) CTTATCACTGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTTGCTGCTGTTGCAGTTGTGAGTGGTGGCATCTTCTGGCGGCTGCTTATTGGTTCGCTTGTCATGCTAGTAGCTGGTTACGCCGGTGAGGCCGGACTGGTGAATGCTTGGCTTGGTTTTGTTGTCGGAATGGCAGGCTGGTTCTACATTCTGTATGAAATCTTTGCGGGCGAAGCTGGTAAAGCATCAGCAGAGCAGGCTCCGGCGTCGGTGCAGGCGGCGTTCTCAACAATGCGTTGGATCGTGACGATC LITVPLQMVEFYFILAAVAVVSGGIFWRLLIGSLVMLVAGYAGEAGLVNAWLGFVVGMAGWFYILYEIFAGEAGKASAEQAPASVQAAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATCACTGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTTGCTGCT---------GTT---GCAGTTGTGAGTGGT---GGCATC------------------------------------TTCTGGCGG---CTGCTTATTGGTTCGCTTGTCATGCTAGTAGCTGGTTACGCCGGTGAG---------GCC------------------GGA------CTG---------------------------------GTG------------------------------------------------------------------AATGCT------------------TGGCTTGGT---TTTGTTGTCGGAATGGCAGGCTGGTTCTACATTCTGTATGAAATC---------------TTT------GCG---GGCGAAGCTGGTAAAGCATCAGCAGAG------CAG---GCTCCGGCGTCGGTG---CAG---GCG---GCG---TTC---TCA---ACAATG---CGTTGGATCGTGACGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSG-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWFYILYEI-----F--A-GEAGKASAE--Q-APASV-Q-A-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ926721 [IV-Proteo4-BAC17H08] PRGD_OTU002b_4fefc2408505ffb7106dd5d9374bdd61 gb|KJ926721| PRGD_OTU002b_4fefc2408505ffb7106dd5d9374bdd61, putative proteorhodopsin gene, partial cds. PRGD_OTU002b_4fefc2408505ffb7106dd5d9374bdd61, putative proteorhodopsin gene, partial cds. KJ926721 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTTATCACTGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTTGCTGCTGTTGCAGTTGTGAGTGGTGGCATCTTCTGGCGGCTGCTTATTGGTTCGCTTGTCATGCTGGTAGCTGGTTACGCCGGTGAGGCCGGACTGGTGAATGCTTGGCTTGGTTTTGTTGTCGGAATGGCAGGCTGGTTCTACATTCTGTATGAAATCTTTGCGGGCGAAGCTGGTAAAGCATCAGCAGAGCAGGCTCCGGCGTCGGTGCAGTCGGCGTTCTCAACAATGCGCTGGATCGTGACGATC LITVPLQMVEFYFILAAVAVVSGGIFWRLLIGSLVMLVAGYAGEAGLVNAWLGFVVGMAGWFYILYEIFAGEAGKASAEQAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATCACTGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTTGCTGCT---------GTT---GCAGTTGTGAGTGGT---GGCATC------------------------------------TTCTGGCGG---CTGCTTATTGGTTCGCTTGTCATGCTGGTAGCTGGTTACGCCGGTGAG---------GCC------------------GGA------CTG---------------------------------GTG------------------------------------------------------------------AATGCT------------------TGGCTTGGT---TTTGTTGTCGGAATGGCAGGCTGGTTCTACATTCTGTATGAAATC---------------TTT------GCG---GGCGAAGCTGGTAAAGCATCAGCAGAG------CAG---GCTCCGGCGTCGGTG---CAG---TCG---GCG---TTC---TCA---ACAATG---CGCTGGATCGTGACGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSG-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWFYILYEI-----F--A-GEAGKASAE--Q-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ926727 [IV-Proteo4-BAC17H08] PRGD_OTU002b_98a62e55c848726feeab3564a8e3b82b gb|KJ926727| PRGD_OTU002b_98a62e55c848726feeab3564a8e3b82b, putative proteorhodopsin gene, partial cds. PRGD_OTU002b_98a62e55c848726feeab3564a8e3b82b, putative proteorhodopsin gene, partial cds. KJ926727 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) CTTATTACTGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTGGCTGCTGTTGCAGTTGTAAGCGGTGGCATCTTCTGGCGGCTTCTTATTGGTTCGCTTGTTATGCTGGTTGCTGGTTACGCCGGTGAGGCTGGACTGGTGAATGCTTGGCTTGGTTTTGTTGTTGGAATGGCAGGCTGGTTCTACATTCTGTATGAAATCTTTGCAGGTGAAGCTGGTAAAGCATCAGCAGAGCAGGCTCCGGAGTCGGTGCAGGCGGCGTTCTCAACAATGCGCTGGATCGTGACGATC LITVPLQMVEFYFILAAVAVVSGGIFWRLLIGSLVMLVAGYAGEAGLVNAWLGFVVGMAGWFYILYEIFAGEAGKASAEQAPESVQAAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATTACTGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTGGCTGCT---------GTT---GCAGTTGTAAGCGGT---GGCATC------------------------------------TTCTGGCGG---CTTCTTATTGGTTCGCTTGTTATGCTGGTTGCTGGTTACGCCGGTGAG---------GCT------------------GGA------CTG---------------------------------GTG------------------------------------------------------------------AATGCT------------------TGGCTTGGT---TTTGTTGTTGGAATGGCAGGCTGGTTCTACATTCTGTATGAAATC---------------TTT------GCA---GGTGAAGCTGGTAAAGCATCAGCAGAG------CAG---GCTCCGGAGTCGGTG---CAG---GCG---GCG---TTC---TCA---ACAATG---CGCTGGATCGTGACGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSG-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWFYILYEI-----F--A-GEAGKASAE--Q-APESV-Q-A-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ926730 [IV-Proteo4-BAC17H08] PRGD_OTU002b_afa0a195c6e487a72dd3f771b9fc765b gb|KJ926730| PRGD_OTU002b_afa0a195c6e487a72dd3f771b9fc765b, putative proteorhodopsin gene, partial cds. PRGD_OTU002b_afa0a195c6e487a72dd3f771b9fc765b, putative proteorhodopsin gene, partial cds. KJ926730 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175) CTTATCACTGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTGGCTGCTGTTGCAGTTGTAAGTGGTGGCATCTTCTGGCGGCTGCTTATTGGTTCGCTTGTTATGCTGGTTGCTGGTTACGCCGGTGAGGCCGGACTGGTTAATGCTTGGCTTGGTTTCGTTGTTGGAATGGCAGGCTGGTTCTACATTCTCTACGAAATCTTTGCAGGTGAAGCTGGTAAAGCATCAGCAGAGCAGGCTCCGGAGTCGGTGCAGGCGGCGTTCTCAACAATGCGCTGGATCGTGACGATC LITVPLQMVEFYFILAAVAVVSGGIFWRLLIGSLVMLVAGYAGEAGLVNAWLGFVVGMAGWFYILYEIFAGEAGKASAEQAPESVQAAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATCACTGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTGGCTGCT---------GTT---GCAGTTGTAAGTGGT---GGCATC------------------------------------TTCTGGCGG---CTGCTTATTGGTTCGCTTGTTATGCTGGTTGCTGGTTACGCCGGTGAG---------GCC------------------GGA------CTG---------------------------------GTT------------------------------------------------------------------AATGCT------------------TGGCTTGGT---TTCGTTGTTGGAATGGCAGGCTGGTTCTACATTCTCTACGAAATC---------------TTT------GCA---GGTGAAGCTGGTAAAGCATCAGCAGAG------CAG---GCTCCGGAGTCGGTG---CAG---GCG---GCG---TTC---TCA---ACAATG---CGCTGGATCGTGACGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSG-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWFYILYEI-----F--A-GEAGKASAE--Q-APESV-Q-A-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ926722 [IV-Proteo4-BAC17H08] PRGD_OTU002b_5e9fa266ab568dcf94d247bb49499040 gb|KJ926722| PRGD_OTU002b_5e9fa266ab568dcf94d247bb49499040, putative proteorhodopsin gene, partial cds. PRGD_OTU002b_5e9fa266ab568dcf94d247bb49499040, putative proteorhodopsin gene, partial cds. KJ926722 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTATCACTGTTCCACTACAAATGGTTGAATTCTACTTCATCCTGGCTGCTGTTGCAGTTGTAAGTGGCGGCATCTTCTGGCGGCTGCTTATTGGTTCGCTTGTTATGCTGGTTGCTGGCTACGCGGGTGAGGCTGGACTTGTGAATGCTTGGCTCGGCTTTGTTGTCGGACTGGCAGGCTGGTTCTACATTCTGTATGAAATCTTTGCAGGCGAAGCTGGCAAGGCATCAGCAGAACAGGCTCCAGCGTCGGTGCAGTCAGCGTTCTCAACAATGCGCTGGATCGTGACGATT LITVPLQMVEFYFILAAVAVVSGGIFWRLLIGSLVMLVAGYAGEAGLVNAWLGFVVGLAGWFYILYEIFAGEAGKASAEQAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATCACTGTTCCACTACAAATGGTTGAATTCTACTTCATCCTGGCTGCT---------GTT---GCAGTTGTAAGTGGC---GGCATC------------------------------------TTCTGGCGG---CTGCTTATTGGTTCGCTTGTTATGCTGGTTGCTGGCTACGCGGGTGAG---------GCT------------------GGA------CTT---------------------------------GTG------------------------------------------------------------------AATGCT------------------TGGCTCGGC---TTTGTTGTCGGACTGGCAGGCTGGTTCTACATTCTGTATGAAATC---------------TTT------GCA---GGCGAAGCTGGCAAGGCATCAGCAGAA------CAG---GCTCCAGCGTCGGTG---CAG---TCA---GCG---TTC---TCA---ACAATG---CGCTGGATCGTGACGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSG-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------V----------------------NA------WLG-FVVGLAGWFYILYEI-----F--A-GEAGKASAE--Q-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ926725 [IV-Proteo4-BAC17H08] PRGD_OTU002b_7e4ae48f06540dea35442e440de6ca0f gb|KJ926725| PRGD_OTU002b_7e4ae48f06540dea35442e440de6ca0f, putative proteorhodopsin gene, partial cds. PRGD_OTU002b_7e4ae48f06540dea35442e440de6ca0f, putative proteorhodopsin gene, partial cds. KJ926725 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTTATCACAGTTCCACTACAAATGGTTGAATTCTACTTCATCCTGGCCGCTGTTGCAGTTGTCAGTGGTGGCATTTTCTGGCGGCTGCTTGTTGGCTCGCTTGTTATGCTGGTTGCCGGTTATGCAGGTGAGGCCGGTCTTGTAAATGCTTGGCTCGGTTTTGTTGTCGGGATGGCAGGCTGGTTCTACATCCTGTATGAAATCTTTGCAGGTGAAGCTGGCAAAGCATCAGCAGAACAGGCTCCTGAGTCGGTACAGTCAGCGTTTGCAACAATGCGCTGGATCGTAACGATT LITVPLQMVEFYFILAAVAVVSGGIFWRLLVGSLVMLVAGYAGEAGLVNAWLGFVVGMAGWFYILYEIFAGEAGKASAEQAPESVQSAFATMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATCACAGTTCCACTACAAATGGTTGAATTCTACTTCATCCTGGCCGCT---------GTT---GCAGTTGTCAGTGGT---GGCATT------------------------------------TTCTGGCGG---CTGCTTGTTGGCTCGCTTGTTATGCTGGTTGCCGGTTATGCAGGTGAG---------GCC------------------GGT------CTT---------------------------------GTA------------------------------------------------------------------AATGCT------------------TGGCTCGGT---TTTGTTGTCGGGATGGCAGGCTGGTTCTACATCCTGTATGAAATC---------------TTT------GCA---GGTGAAGCTGGCAAAGCATCAGCAGAA------CAG---GCTCCTGAGTCGGTA---CAG---TCA---GCG---TTT---GCA---ACAATG---CGCTGGATCGTAACGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSG-GI------------FWR-LLVGSLVMLVAGYAGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWFYILYEI-----F--A-GEAGKASAE--Q-APESV-Q-S-A-F-A-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ926726 [IV-Proteo4-BAC17H08] PRGD_OTU002b_7f057c400b7c7acdbe0b6b7a56cf22fe gb|KJ926726| PRGD_OTU002b_7f057c400b7c7acdbe0b6b7a56cf22fe, putative proteorhodopsin gene, partial cds. PRGD_OTU002b_7f057c400b7c7acdbe0b6b7a56cf22fe, putative proteorhodopsin gene, partial cds. KJ926726 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-33.28, 45.35) CTTATCACAGTTCCACTACAAATGGTTGAATTCTACTTCATCCTGGCCGCTGTTGCAGTTGTCAGTGGTGGCATTTTCTGGCGGCTGCTTGTTGGCTCGCTTGTTATGCTGGTTGCCGGTTATGCCGGTGAGGCCGGTCTTGTAAATGCTTGGCTCGGTTTTGTTGTCGGGATGGCAGGCTGGTTCTACATCCTGTATGAAATCTTTGCAGGTGAAGCCGGTAAAGCATCAGCAGAACAGGCTCCTGAGTCGGTACAGTCAGCGTTTGCAACAATGCGCTGGATCGTAACGATT LITVPLQMVEFYFILAAVAVVSGGIFWRLLVGSLVMLVAGYAGEAGLVNAWLGFVVGMAGWFYILYEIFAGEAGKASAEQAPESVQSAFATMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATCACAGTTCCACTACAAATGGTTGAATTCTACTTCATCCTGGCCGCT---------GTT---GCAGTTGTCAGTGGT---GGCATT------------------------------------TTCTGGCGG---CTGCTTGTTGGCTCGCTTGTTATGCTGGTTGCCGGTTATGCCGGTGAG---------GCC------------------GGT------CTT---------------------------------GTA------------------------------------------------------------------AATGCT------------------TGGCTCGGT---TTTGTTGTCGGGATGGCAGGCTGGTTCTACATCCTGTATGAAATC---------------TTT------GCA---GGTGAAGCCGGTAAAGCATCAGCAGAA------CAG---GCTCCTGAGTCGGTA---CAG---TCA---GCG---TTT---GCA---ACAATG---CGCTGGATCGTAACGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSG-GI------------FWR-LLVGSLVMLVAGYAGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWFYILYEI-----F--A-GEAGKASAE--Q-APESV-Q-S-A-F-A-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ926719 [IV-Proteo4-BAC17H08] PRGD_OTU002b_2416ff73a063b4b74a673778c2366dd2 gb|KJ926719| PRGD_OTU002b_2416ff73a063b4b74a673778c2366dd2, putative proteorhodopsin gene, partial cds. PRGD_OTU002b_2416ff73a063b4b74a673778c2366dd2, putative proteorhodopsin gene, partial cds. KJ926719 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) CTTATCACAGTTCCACTACAAATGGTTGAATTCTACTTCATCCTGGCTGCTGTTGCAGTTGTCAGTGGTGGCATTTTCTGGCGGCTGCTTGTTGGCTCGCTTGTTATGCTGGTTGCCGGTTATGCCGGTGAGGCGGGACTTGTAAATGCTTGGCTCGGCTTTGTTGTCGGGATGGCAGGCTGGTTCTACATCCTGTATGAAATCTTTGCAGGTGAAGCCGGTAAAGCATCAGCAGAACAGGCTCCTGAGTCGGTACAGTCAGCGTTTGCAACAATGCGCTGGATCGTGACGATT LITVPLQMVEFYFILAAVAVVSGGIFWRLLVGSLVMLVAGYAGEAGLVNAWLGFVVGMAGWFYILYEIFAGEAGKASAEQAPESVQSAFATMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATCACAGTTCCACTACAAATGGTTGAATTCTACTTCATCCTGGCTGCT---------GTT---GCAGTTGTCAGTGGT---GGCATT------------------------------------TTCTGGCGG---CTGCTTGTTGGCTCGCTTGTTATGCTGGTTGCCGGTTATGCCGGTGAG---------GCG------------------GGA------CTT---------------------------------GTA------------------------------------------------------------------AATGCT------------------TGGCTCGGC---TTTGTTGTCGGGATGGCAGGCTGGTTCTACATCCTGTATGAAATC---------------TTT------GCA---GGTGAAGCCGGTAAAGCATCAGCAGAA------CAG---GCTCCTGAGTCGGTA---CAG---TCA---GCG---TTT---GCA---ACAATG---CGCTGGATCGTGACGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AVVSG-GI------------FWR-LLVGSLVMLVAGYAGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWFYILYEI-----F--A-GEAGKASAE--Q-APESV-Q-S-A-F-A-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ926723 [IV-Proteo4-BAC17H08] PRGD_OTU002b_70ec4c46e548261749052337f5c3f0c5 gb|KJ926723| PRGD_OTU002b_70ec4c46e548261749052337f5c3f0c5, putative proteorhodopsin gene, partial cds. PRGD_OTU002b_70ec4c46e548261749052337f5c3f0c5, putative proteorhodopsin gene, partial cds. KJ926723 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) CTCATCACAGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTGGCTGCTGTTGCGGCTGTCAGCGGTGGTATTTTCTGGCGTCTGCTTATTGGCTCGCTCGTCATGCTGGTTGCTGGTTATGCCGGCGAAGCAGGACTTGTGAATGCATGGCTCGGCTTTGTCGTCGGGATGGCAGGCTGGTTCTACATCCTGTATGAGATCTTTGCTGGTGAAGCTGGCAAGGCCTCAGCTGAGCAGGCTCCTGAGTCAGTTCAATCAGCATTTTCAACAATGCGCTGGATCGTGACGATC LITVPLQMVEFYFILAAVAAVSGGIFWRLLIGSLVMLVAGYAGEAGLVNAWLGFVVGMAGWFYILYEIFAGEAGKASAEQAPESVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTGGCTGCT---------GTT---GCGGCTGTCAGCGGT---GGTATT------------------------------------TTCTGGCGT---CTGCTTATTGGCTCGCTCGTCATGCTGGTTGCTGGTTATGCCGGCGAA---------GCA------------------GGA------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTCGTCGGGATGGCAGGCTGGTTCTACATCCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGGCCTCAGCTGAG------CAG---GCTCCTGAGTCAGTT---CAA---TCA---GCA---TTT---TCA---ACAATG---CGCTGGATCGTGACGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AAVSG-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWFYILYEI-----F--A-GEAGKASAE--Q-APESV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ926734 [IV-Proteo4-BAC17H08] PRGD_OTU002b_eeca581f3e2cecf8bb76be4847c50028 gb|KJ926734| PRGD_OTU002b_eeca581f3e2cecf8bb76be4847c50028, putative proteorhodopsin gene, partial cds. PRGD_OTU002b_eeca581f3e2cecf8bb76be4847c50028, putative proteorhodopsin gene, partial cds. KJ926734 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) CTCATCACAGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTGGCTGCTGTTGCAGCTGTCAGCGGTGGTATTTTCTGGCGTCTGCTTATTGGTTCGCTCGTCATGCTGGTTGCTGGTTATGCCGGCGAAGCAGGGCTTGTGAATGCATGGCTCGGCTTTGTTGTCGGGATGGCAGGCTGGTTCTACATCCTGTATGAGATCTTTGCTGGTGAAGCTGGCAAGGCCTCAGCTGAGCAGGCTCCTGAGTCAGTTCAGTCAGCATTTTCAACAATGCGCTGGATCGTGACGATC LITVPLQMVEFYFILAAVAAVSGGIFWRLLIGSLVMLVAGYAGEAGLVNAWLGFVVGMAGWFYILYEIFAGEAGKASAEQAPESVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTGGCTGCT---------GTT---GCAGCTGTCAGCGGT---GGTATT------------------------------------TTCTGGCGT---CTGCTTATTGGTTCGCTCGTCATGCTGGTTGCTGGTTATGCCGGCGAA---------GCA------------------GGG------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTTGTCGGGATGGCAGGCTGGTTCTACATCCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGGCCTCAGCTGAG------CAG---GCTCCTGAGTCAGTT---CAG---TCA---GCA---TTT---TCA---ACAATG---CGCTGGATCGTGACGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AAVSG-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWFYILYEI-----F--A-GEAGKASAE--Q-APESV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ926732 [IV-Proteo4-BAC17H08] PRGD_OTU002b_bf2f56ab0383af1b5641b8d98d97d321 gb|KJ926732| PRGD_OTU002b_bf2f56ab0383af1b5641b8d98d97d321, putative proteorhodopsin gene, partial cds. PRGD_OTU002b_bf2f56ab0383af1b5641b8d98d97d321, putative proteorhodopsin gene, partial cds. KJ926732 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683) CTCATCACAGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTGGCTGCTGTTGCAGCTGTTAGCGGTGGTATTTTCTGGCGTCTGCTTATTGGTTCGCTCGTCATGCTGGTTGCTGGTTATGCCGGCGAAGCAGGGCTTGTGAATGCATGGCTGGGCTTTGTTGTCGGGATGGCAGGCTGGTTCTACATCCTGTACGAGATCTTCGCTGGTGAAGCTGGCAAGGCCTCAGCTGAGCAGGCTCCTGAGTCAGTTCAATCAGCATTTTCAACAATGCGCTGGATCGTGACGATC LITVPLQMVEFYFILAAVAAVSGGIFWRLLIGSLVMLVAGYAGEAGLVNAWLGFVVGMAGWFYILYEIFAGEAGKASAEQAPESVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTGGCTGCT---------GTT---GCAGCTGTTAGCGGT---GGTATT------------------------------------TTCTGGCGT---CTGCTTATTGGTTCGCTCGTCATGCTGGTTGCTGGTTATGCCGGCGAA---------GCA------------------GGG------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTGGGC---TTTGTTGTCGGGATGGCAGGCTGGTTCTACATCCTGTACGAGATC---------------TTC------GCT---GGTGAAGCTGGCAAGGCCTCAGCTGAG------CAG---GCTCCTGAGTCAGTT---CAA---TCA---GCA---TTT---TCA---ACAATG---CGCTGGATCGTGACGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AAVSG-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWFYILYEI-----F--A-GEAGKASAE--Q-APESV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ926724 [IV-Proteo4-BAC17H08] PRGD_OTU002b_78c7d159db5b0557d016be36c6228ff4 gb|KJ926724| PRGD_OTU002b_78c7d159db5b0557d016be36c6228ff4, putative proteorhodopsin gene, partial cds. PRGD_OTU002b_78c7d159db5b0557d016be36c6228ff4, putative proteorhodopsin gene, partial cds. KJ926724 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTGATCACAGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTGGCTGCCGTTGCAGCTGTCAGCGGTGGTATTTTCTGGCGTTTGCTTATTGGTTCGCTCGTCATGCTGGTTGCTGGTTATGCCGGCGAAGCAGGACTTGTGAATGCATGGCTCGGCTTTGTTGTCGGGATGGCAGGCTGGTTCTACATCCTGTATGAGATCTTTGCTGGTGAAGCTGGCAAAGCCTCAGCTGAGCAGGCTCCTGAGTCAGTTCAATCAGCATTTTCAACAATGCGCTGGATCGTCACGATC LITVPLQMVEFYFILAAVAAVSGGIFWRLLIGSLVMLVAGYAGEAGLVNAWLGFVVGMAGWFYILYEIFAGEAGKASAEQAPESVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTGGCTGCC---------GTT---GCAGCTGTCAGCGGT---GGTATT------------------------------------TTCTGGCGT---TTGCTTATTGGTTCGCTCGTCATGCTGGTTGCTGGTTATGCCGGCGAA---------GCA------------------GGA------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTTGTCGGGATGGCAGGCTGGTTCTACATCCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAAGCCTCAGCTGAG------CAG---GCTCCTGAGTCAGTT---CAA---TCA---GCA---TTT---TCA---ACAATG---CGCTGGATCGTCACGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AAVSG-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWFYILYEI-----F--A-GEAGKASAE--Q-APESV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ926736 [IV-Proteo4-BAC17H08] PRGD_OTU002b_fed60ff1a5adacefe6691ac259458a0d gb|KJ926736| PRGD_OTU002b_fed60ff1a5adacefe6691ac259458a0d, putative proteorhodopsin gene, partial cds. PRGD_OTU002b_fed60ff1a5adacefe6691ac259458a0d, putative proteorhodopsin gene, partial cds. KJ926736 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) CTGATCACTGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTGGCTGCCGTTGCAGCTGTCAGCGGTGGTATTTTCTGGCGTTTGCTTATTGGTTCGCTCGTCATGCTGGTTGCTGGTTATGCCGGCGAAGCAGGACTTGTGAATGCATGGCTCGGCTTTATTGTCGGGTTGGCAGGCTGGTTCTACATCCTGTATGAGATTTTTGCTGGTGAAGCTGGCAAAGCCTCAGCTGAGCAGGCTCCTGAGTCAGTTCAATCAGCATTTTCAACAATGCGCTGGATCGTCACGATC LITVPLQMVEFYFILAAVAAVSGGIFWRLLIGSLVMLVAGYAGEAGLVNAWLGFIVGLAGWFYILYEIFAGEAGKASAEQAPESVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTGGCTGCC---------GTT---GCAGCTGTCAGCGGT---GGTATT------------------------------------TTCTGGCGT---TTGCTTATTGGTTCGCTCGTCATGCTGGTTGCTGGTTATGCCGGCGAA---------GCA------------------GGA------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTATTGTCGGGTTGGCAGGCTGGTTCTACATCCTGTATGAGATT---------------TTT------GCT---GGTGAAGCTGGCAAAGCCTCAGCTGAG------CAG---GCTCCTGAGTCAGTT---CAA---TCA---GCA---TTT---TCA---ACAATG---CGCTGGATCGTCACGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AAVSG-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------V----------------------NA------WLG-FIVGLAGWFYILYEI-----F--A-GEAGKASAE--Q-APESV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ926733 [IV-Proteo4-BAC17H08] PRGD_OTU002b_d57da4025680ec03d91e0952f763e0e7 gb|KJ926733| PRGD_OTU002b_d57da4025680ec03d91e0952f763e0e7, putative proteorhodopsin gene, partial cds. PRGD_OTU002b_d57da4025680ec03d91e0952f763e0e7, putative proteorhodopsin gene, partial cds. KJ926733 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTATCACAGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTGGCTGCTGTTGCAGCTGTCAGCGGTGGTATTTTCTGGCGTCTGCTTATTGGTTCGCTCGTCATGCTGGTTGCTGGTTATGCCGGCGAAGCAGGACTGGTGAATGCATGGCTCGGCTTTGTTGTCGGGATGGCCGGTTGGTTCTACATCCTTTATGAGATCTTTGCTGGTGAAGCTGGTAAAGCTTCAGCTGAGCAGGCTCCTGAGTCAGTTCAATCAGCATTTTCAACAATGCGCTGGATCGTGACAATC LITVPLQMVEFYFILAAVAAVSGGIFWRLLIGSLVMLVAGYAGEAGLVNAWLGFVVGMAGWFYILYEIFAGEAGKASAEQAPESVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATCACAGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTGGCTGCT---------GTT---GCAGCTGTCAGCGGT---GGTATT------------------------------------TTCTGGCGT---CTGCTTATTGGTTCGCTCGTCATGCTGGTTGCTGGTTATGCCGGCGAA---------GCA------------------GGA------CTG---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTTGTCGGGATGGCCGGTTGGTTCTACATCCTTTATGAGATC---------------TTT------GCT---GGTGAAGCTGGTAAAGCTTCAGCTGAG------CAG---GCTCCTGAGTCAGTT---CAA---TCA---GCA---TTT---TCA---ACAATG---CGCTGGATCGTGACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AAVSG-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWFYILYEI-----F--A-GEAGKASAE--Q-APESV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ926718 [IV-Proteo4-BAC17H08] PRGD_OTU002b_03127d0283746c4b41dc2986b91bee2d gb|KJ926718| PRGD_OTU002b_03127d0283746c4b41dc2986b91bee2d, putative proteorhodopsin gene, partial cds. PRGD_OTU002b_03127d0283746c4b41dc2986b91bee2d, putative proteorhodopsin gene, partial cds. KJ926718 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTCATCACAGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTGGCTGCTGTTGCAGCTGTCAGCGGTGGTATTTTCTGGCGTCTGCTTATTGGTTCGCTCGTCATGCTGGTTGCTGGTTATGCCGGCGAGGCAGGACTTGTGAATGCATGGCTCGGCTTTGTTGTCGGGATGGCAGGCTGGTTCTACATCCTATATGAGATCTTTGCTGGTGAAGCTGGCAAGGCCTCAGCTGAGCAGGCTCCCGAGTCAGTTCAATCAGCATTTTCAACAATGCGCTGGATCGTGACGATC LITVPLQMVEFYFILAAVAAVSGGIFWRLLIGSLVMLVAGYAGEAGLVNAWLGFVVGMAGWFYILYEIFAGEAGKASAEQAPESVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTGGCTGCT---------GTT---GCAGCTGTCAGCGGT---GGTATT------------------------------------TTCTGGCGT---CTGCTTATTGGTTCGCTCGTCATGCTGGTTGCTGGTTATGCCGGCGAG---------GCA------------------GGA------CTT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTTGTCGGGATGGCAGGCTGGTTCTACATCCTATATGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGGCCTCAGCTGAG------CAG---GCTCCCGAGTCAGTT---CAA---TCA---GCA---TTT---TCA---ACAATG---CGCTGGATCGTGACGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AAVSG-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWFYILYEI-----F--A-GEAGKASAE--Q-APESV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ926729 [IV-Proteo4-BAC17H08] PRGD_OTU002b_af768df8954b0977478756265b52224e gb|KJ926729| PRGD_OTU002b_af768df8954b0977478756265b52224e, putative proteorhodopsin gene, partial cds. PRGD_OTU002b_af768df8954b0977478756265b52224e, putative proteorhodopsin gene, partial cds. KJ926729 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTCATCACAGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTAGCTGCTGTTGCAGCTGTCAGCGGTGGCATTTTCTGGCGTCTGCTTATTGGTTCGCTCGTCATGCTTGTTGCTGGTTATGCTGGTGAAGCAGGACTCGTGAATGCATGGCTTGGCTTTATTGTTGGGCTGGCAGGCTGGTTCTACATCCTGTATGAGATCTTTGCTGGTGAAGCTGGCAAAGCCTCAGCTGAGCAGGCTCCTGAGTCAGTTCAATCAGCATTTTCAACAATGCGCTGGATCGTGACGATT LITVPLQMVEFYFILAAVAAVSGGIFWRLLIGSLVMLVAGYAGEAGLVNAWLGFIVGLAGWFYILYEIFAGEAGKASAEQAPESVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTAGCTGCT---------GTT---GCAGCTGTCAGCGGT---GGCATT------------------------------------TTCTGGCGT---CTGCTTATTGGTTCGCTCGTCATGCTTGTTGCTGGTTATGCTGGTGAA---------GCA------------------GGA------CTC---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTTGGC---TTTATTGTTGGGCTGGCAGGCTGGTTCTACATCCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAAGCCTCAGCTGAG------CAG---GCTCCTGAGTCAGTT---CAA---TCA---GCA---TTT---TCA---ACAATG---CGCTGGATCGTGACGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AAVSG-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------V----------------------NA------WLG-FIVGLAGWFYILYEI-----F--A-GEAGKASAE--Q-APESV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ926735 [IV-Proteo4-BAC17H08] PRGD_OTU002b_f42908c37de26cdc3df25698540202ca gb|KJ926735| PRGD_OTU002b_f42908c37de26cdc3df25698540202ca, putative proteorhodopsin gene, partial cds. PRGD_OTU002b_f42908c37de26cdc3df25698540202ca, putative proteorhodopsin gene, partial cds. KJ926735 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCATCACAGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTCGCTGCTGTTGCAGCTGTCAGCGGTGGCATTTTCTGGCGGCTGCTTATTGGTTCGCTTGTCATGCTGGTTGCCGGTTATGCTGGCGAAGCAGGACTCGTGAATGCATGGCTCGGCTTTGTTGTCGGTATGGCAGGCTGGTTCTACATCCTGTATGAGATCTTTGCTGGTGAAGCTGGCAAAGCCTCAGCTGAGCAGGCTCCCGAGTCAGTTCAATCAGCATTTTCGACAATGCGCTGGATCGTGACGATT LITVPLQMVEFYFILAAVAAVSGGIFWRLLIGSLVMLVAGYAGEAGLVNAWLGFVVGMAGWFYILYEIFAGEAGKASAEQAPESVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTTCCACTGCAAATGGTTGAATTCTACTTCATCCTCGCTGCT---------GTT---GCAGCTGTCAGCGGT---GGCATT------------------------------------TTCTGGCGG---CTGCTTATTGGTTCGCTTGTCATGCTGGTTGCCGGTTATGCTGGCGAA---------GCA------------------GGA------CTC---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTTGTCGGTATGGCAGGCTGGTTCTACATCCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAAGCCTCAGCTGAG------CAG---GCTCCCGAGTCAGTT---CAA---TCA---GCA---TTT---TCG---ACAATG---CGCTGGATCGTGACGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-AAVSG-GI------------FWR-LLIGSLVMLVAGYAGE---A------G--L-----------V----------------------NA------WLG-FVVGMAGWFYILYEI-----F--A-GEAGKASAE--Q-APESV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-BAC17H08]_KJ926720 [IV-Proteo4-BAC17H08] PRGD_OTU002b_28655e46a67ab8c78bd414767a874ce0 gb|KJ926720| PRGD_OTU002b_28655e46a67ab8c78bd414767a874ce0, putative proteorhodopsin gene, partial cds. PRGD_OTU002b_28655e46a67ab8c78bd414767a874ce0, putative proteorhodopsin gene, partial cds. KJ926720 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/BAC17H08 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 BAC17H08 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Mediterranean Sea (33.762, 29.175), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATTACAGTGCCGCTTCAAATGGTTGAATTCTATTTCATCCTTGCTGCTGTAACTGCCGTCAGTGCGGGAATATTCTGGCGGCTTCTGCTTGGATCACTTGTGATGTTGGTTGCAGGTTATTTAGGCGAAGCAGGTCTGATCAATGCTTGGGCAGGCTTCATCGTCGGACTAGCGGGTTGGGCATACATCCTGTATGAGATCTTCGCTGGAGAAGCTGGTCGGGTATCAGCAGAAAAGGCACCGGCATCGGTCCAATCGGCTTTTGAGACGATGCGTTTAATCGTGACGGTC LITVPLQMVEFYFILAAVTAVSAGIFWRLLLGSLVMLVAGYLGEAGLINAWAGFIVGLAGWAYILYEIFAGEAGRVSAEKAPASVQSAFETMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACAGTGCCGCTTCAAATGGTTGAATTCTATTTCATCCTTGCTGCT---------GTA---ACTGCCGTCAGTGCG---GGAATA------------------------------------TTCTGGCGG---CTTCTGCTTGGATCACTTGTGATGTTGGTTGCAGGTTATTTAGGCGAA---------GCA------------------GGT------CTG---------------------------------ATC------------------------------------------------------------------AATGCT------------------TGGGCAGGC---TTCATCGTCGGACTAGCGGGTTGGGCATACATCCTGTATGAGATC---------------TTC------GCT---GGAGAAGCTGGTCGGGTATCAGCAGAA------AAG---GCACCGGCATCGGTC---CAA---TCG---GCT---TTT---GAG---ACGATG---CGTTTAATCGTGACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLLGSLVMLVAGYLGE---A------G--L-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGRVSAE--K-APASV-Q-S-A-F-E-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927549 [IV-Proteo4-c] PRGD_OTU011_ad6617ca06587606d45707a030c88478 gb|KJ927549| PRGD_OTU011_ad6617ca06587606d45707a030c88478, putative proteorhodopsin gene, partial cds. PRGD_OTU011_ad6617ca06587606d45707a030c88478, putative proteorhodopsin gene, partial cds. KJ927549 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCCGTAACCGTCGTAAGCGCTGGAGTTTTCTGGCGTTTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGAGAAGCAGGATTGGCTCCAGCATGGCCAGCATTTATTGTCGGCATGCTAGGTTGGGGGTACATCCTTTATGAAATCTTCGCCGGTGAAGCGGGTCGGGTATCCTCCGAATCAGCACCAGCGGGAGTTCAGTCTGCGTTCGGCACAATGCGTTTGATCGTAACTGTA LITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCC---------GTA---ACCGTCGTAAGCGCT---GGAGTT------------------------------------TTCTGGCGT---TTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGAGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTTATTGTCGGCATGCTAGGTTGGGGGTACATCCTTTATGAAATC---------------TTC------GCC---GGTGAAGCGGGTCGGGTATCCTCCGAA------TCA---GCACCAGCGGGAGTT---CAG---TCT---GCG---TTC---GGC---ACAATG---CGTTTGATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927505 [IV-Proteo4-c] PRGD_OTU011_otuREP_9e5aa498081794274a0884ecbd4d0fc4 gb|KJ927505| PRGD_OTU011_otuREP_9e5aa498081794274a0884ecbd4d0fc4, putative proteorhodopsin gene, partial cds. PRGD_OTU011_otuREP_9e5aa498081794274a0884ecbd4d0fc4, putative proteorhodopsin gene, partial cds. KJ927505 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCCGTAACCGTCGTAAGCGCTGGAGTTTTCTGGCGTTTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGAGAAGCAGGATTGGCTCCAGCATGGCCAGCATTTATTGTCGGCATGCTAGGTTGGGGTTACATCCTTTATGAAATCTTCGCCGGTGAAGCGGGTCGGGTTTCCTCCGAATCAGCACCAGCGGGAGTTCAGTCTGCGTTCGGCACAATGCGTTTGATCGTAACTGTA LITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCC---------GTA---ACCGTCGTAAGCGCT---GGAGTT------------------------------------TTCTGGCGT---TTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGAGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTTATTGTCGGCATGCTAGGTTGGGGTTACATCCTTTATGAAATC---------------TTC------GCC---GGTGAAGCGGGTCGGGTTTCCTCCGAA------TCA---GCACCAGCGGGAGTT---CAG---TCT---GCG---TTC---GGC---ACAATG---CGTTTGATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927527 [IV-Proteo4-c] PRGD_OTU011_4968130229a9069f049413ddee3629ca gb|KJ927527| PRGD_OTU011_4968130229a9069f049413ddee3629ca, putative proteorhodopsin gene, partial cds. PRGD_OTU011_4968130229a9069f049413ddee3629ca, putative proteorhodopsin gene, partial cds. KJ927527 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTCATTCTGGCTGCCGTAACGGTCGTAAGCGCTGGAGTTTTCTGGCGTTTGATGATTGGCTCACTGGTGATGTTGGTTGCAGGCTACATGGGAGAAGCAGGTTTGGCTCCAGCATGGCCAGCATTTATTGTCGGCATGCTAGGTTGGGGTTACATCCTTTATGAAATCTTCGCCGGTGAAGCGGGTCGGGTTTCCTCCGAGTCAGCACCAGCGGGAGTTCAGTCTGCGTTCGGTACAATGCGTTTGATCGTAACTGTA LITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTCATTCTGGCTGCC---------GTA---ACGGTCGTAAGCGCT---GGAGTT------------------------------------TTCTGGCGT---TTGATGATTGGCTCACTGGTGATGTTGGTTGCAGGCTACATGGGAGAA---------GCA------------------GGT------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTTATTGTCGGCATGCTAGGTTGGGGTTACATCCTTTATGAAATC---------------TTC------GCC---GGTGAAGCGGGTCGGGTTTCCTCCGAG------TCA---GCACCAGCGGGAGTT---CAG---TCT---GCG---TTC---GGT---ACAATG---CGTTTGATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927562 [IV-Proteo4-c] PRGD_OTU011_fb9bf65e7ba09828b70aa14828664e78 gb|KJ927562| PRGD_OTU011_fb9bf65e7ba09828b70aa14828664e78, putative proteorhodopsin gene, partial cds. PRGD_OTU011_fb9bf65e7ba09828b70aa14828664e78, putative proteorhodopsin gene, partial cds. KJ927562 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 01-juil-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCCGTAACGGTCGTAAGCGCTGGAGTTTTCTGGCGTTTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGAGAAGCAGGTTTGGCTCCAGCATGGCCAGCATTCATTGTCGGCATGCTAGGTTGGGGTTACATCCTTTATGAAATCTTCGCCGGTGAAGCAGGTCGGGTTTCCTCCGAATCAGCACCAGCGGGGGTTCAGTCCGCGTTCGGCACAATGCGTTTGATCGTAACTGTA LITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCC---------GTA---ACGGTCGTAAGCGCT---GGAGTT------------------------------------TTCTGGCGT---TTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGAGAA---------GCA------------------GGT------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTCATTGTCGGCATGCTAGGTTGGGGTTACATCCTTTATGAAATC---------------TTC------GCC---GGTGAAGCAGGTCGGGTTTCCTCCGAA------TCA---GCACCAGCGGGGGTT---CAG---TCC---GCG---TTC---GGC---ACAATG---CGTTTGATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927534 [IV-Proteo4-c] PRGD_OTU011_6ff24d2690b2f624ed72317fb8f21433 gb|KJ927534| PRGD_OTU011_6ff24d2690b2f624ed72317fb8f21433, putative proteorhodopsin gene, partial cds. PRGD_OTU011_6ff24d2690b2f624ed72317fb8f21433, putative proteorhodopsin gene, partial cds. KJ927534 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) CTGATAACTGTTCCACTTCAAATGGTTGAATTCTATTTCATTCTTGCTGCCGTAACCGTCGTAAGCGCTGGAGTTTTCTGGCGTTTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGAGAAGCAGGTTTGGCTCCAGCATGGCCAGCATTTATTGTCGGCATGCTAGGTTGGGGTTACATCCTTTATGAAATCTTCGCCGGTGAAGCGGGTCGGGTTTCCTCCGAATCAGCACCAGCGGGAGTTCAGTCGGCGTTCGGCACAATGCGTTTGATTGTAACTGTA LITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACTGTTCCACTTCAAATGGTTGAATTCTATTTCATTCTTGCTGCC---------GTA---ACCGTCGTAAGCGCT---GGAGTT------------------------------------TTCTGGCGT---TTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGAGAA---------GCA------------------GGT------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTTATTGTCGGCATGCTAGGTTGGGGTTACATCCTTTATGAAATC---------------TTC------GCC---GGTGAAGCGGGTCGGGTTTCCTCCGAA------TCA---GCACCAGCGGGAGTT---CAG---TCG---GCG---TTC---GGC---ACAATG---CGTTTGATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927541 [IV-Proteo4-c] PRGD_OTU011_8916ee3668d7218f5cfb7dbcd61bcd0a gb|KJ927541| PRGD_OTU011_8916ee3668d7218f5cfb7dbcd61bcd0a, putative proteorhodopsin gene, partial cds. PRGD_OTU011_8916ee3668d7218f5cfb7dbcd61bcd0a, putative proteorhodopsin gene, partial cds. KJ927541 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCCGTAACCGTCGTAAGCGCTGGAGTTTTCTGGCGTTTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGAGAAGCAGGATTGGCTCCAGTATGGCCAGCATTTATTGTCGGCATGCTAGGTTGGTTTTACATCCTTTATGAAATCTTCGCCGGTGAAGCGGGTCGGGTTTCCTCCGAATCGGCACCAGCGGGAGTTCAGTCTGCGTTCGGCACAATGCGTTTGATCGTAACTGTA LITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPVWPAFIVGMLGWFYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCC---------GTA---ACCGTCGTAAGCGCT---GGAGTT------------------------------------TTCTGGCGT---TTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGAGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGTA------------------TGGCCAGCA---TTTATTGTCGGCATGCTAGGTTGGTTTTACATCCTTTATGAAATC---------------TTC------GCC---GGTGAAGCGGGTCGGGTTTCCTCCGAA------TCG---GCACCAGCGGGAGTT---CAG---TCT---GCG---TTC---GGC---ACAATG---CGTTTGATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PV------WPA-FIVGMLGWFYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927511 [IV-Proteo4-c] PRGD_OTU011_1f3e9d45b6ec0204bb4bd85d48243469 gb|KJ927511| PRGD_OTU011_1f3e9d45b6ec0204bb4bd85d48243469, putative proteorhodopsin gene, partial cds. PRGD_OTU011_1f3e9d45b6ec0204bb4bd85d48243469, putative proteorhodopsin gene, partial cds. KJ927511 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTAATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCCGTAACCGTCGTAAGTGCTGGAGTTTTCTGGCGCTTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGAGAAGCAGGATTGGCTCCAGCATGGCCAGCATTTATTATCGGCATGCTAGGTTGGGGTTACATTCTTTATGAAATCTTCGCGGGTGAAGCCGGTCGGGTTTCCTCCGAGTCAGCCCCAGCGGGAGTTCAGTCTGCGTTCGGCACAATGCGTTTGATCGTAACTGTA LITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIIGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCC---------GTA---ACCGTCGTAAGTGCT---GGAGTT------------------------------------TTCTGGCGC---TTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGAGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTTATTATCGGCATGCTAGGTTGGGGTTACATTCTTTATGAAATC---------------TTC------GCG---GGTGAAGCCGGTCGGGTTTCCTCCGAG------TCA---GCCCCAGCGGGAGTT---CAG---TCT---GCG---TTC---GGC---ACAATG---CGTTTGATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIIGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927538 [IV-Proteo4-c] PRGD_OTU011_7fbb9d4857eda2a05aead7c8221fb2cc gb|KJ927538| PRGD_OTU011_7fbb9d4857eda2a05aead7c8221fb2cc, putative proteorhodopsin gene, partial cds. PRGD_OTU011_7fbb9d4857eda2a05aead7c8221fb2cc, putative proteorhodopsin gene, partial cds. KJ927538 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), English Channel (48.7717, -3.9683) CTAATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCCGTAACCGTCGTAAGTGCTGGAGTTTTCTGGCGCTTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTATATGGGAGAAGCAGGATTGGCTCCAGCATGGCCAGCATTTATTATCGGCATGCTAGGTTGGGGTTACATTCTTTATGAAATCTTCGCGGGCGAAGCCGGTCGGGTTTCCTCCGAGTCAGCCCCAGCGGGAGTTCAGTCTGCGTTCGGCACAATGCGTTTGATCGTAACTGTA LITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIIGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCC---------GTA---ACCGTCGTAAGTGCT---GGAGTT------------------------------------TTCTGGCGC---TTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTATATGGGAGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTTATTATCGGCATGCTAGGTTGGGGTTACATTCTTTATGAAATC---------------TTC------GCG---GGCGAAGCCGGTCGGGTTTCCTCCGAG------TCA---GCCCCAGCGGGAGTT---CAG---TCT---GCG---TTC---GGC---ACAATG---CGTTTGATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIIGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927559 [IV-Proteo4-c] PRGD_OTU011_f3d1cba4200e0ac415d783f4aba3be8f gb|KJ927559| PRGD_OTU011_f3d1cba4200e0ac415d783f4aba3be8f, putative proteorhodopsin gene, partial cds. PRGD_OTU011_f3d1cba4200e0ac415d783f4aba3be8f, putative proteorhodopsin gene, partial cds. KJ927559 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCCGTAACCGTCGTAAGTGCTGGAGTTTTCTGGCGCTTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGAGAAGCAGGATTGGCTCCAGCATGGCCAGCATTTATTGTCGGCATGCTAGGTTGGGGTTACATTCTTTATGAAATCTTCGCGGGTGAAGCCGGTCGGGTTTCCTCCGAGTCAGCCCCAGCGGGAGTTCAGTCTGCGTTCGGCACAATGCGTTTAATCGTAACTGTA LITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCC---------GTA---ACCGTCGTAAGTGCT---GGAGTT------------------------------------TTCTGGCGC---TTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGAGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTTATTGTCGGCATGCTAGGTTGGGGTTACATTCTTTATGAAATC---------------TTC------GCG---GGTGAAGCCGGTCGGGTTTCCTCCGAG------TCA---GCCCCAGCGGGAGTT---CAG---TCT---GCG---TTC---GGC---ACAATG---CGTTTAATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927514 [IV-Proteo4-c] PRGD_OTU011_277faa3e99cd7bb7dc6ac77ee85c3ed8 gb|KJ927514| PRGD_OTU011_277faa3e99cd7bb7dc6ac77ee85c3ed8, putative proteorhodopsin gene, partial cds. PRGD_OTU011_277faa3e99cd7bb7dc6ac77ee85c3ed8, putative proteorhodopsin gene, partial cds. KJ927514 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATAACCGTTCCGCTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCCGTAACCGTCGTAAGTGCTGGAGTTTTCTGGCGTTTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGGGAAGCAGGATTGGCTCCAGCATGGCCAGCATTCATTATCGGCATGTTAGGTTGGGGTTACATTCTTTATGAAATCTTTGCCGGTGAAGCGGGTCGGGTTTCCTCCGAGTCAGCCCCAGCGGGAGTTCAGTCTGCGTTCGGCACAATGCGTTTGATCGTAACTGTA LITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIIGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTTCCGCTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCC---------GTA---ACCGTCGTAAGTGCT---GGAGTT------------------------------------TTCTGGCGT---TTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGGGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTCATTATCGGCATGTTAGGTTGGGGTTACATTCTTTATGAAATC---------------TTT------GCC---GGTGAAGCGGGTCGGGTTTCCTCCGAG------TCA---GCCCCAGCGGGAGTT---CAG---TCT---GCG---TTC---GGC---ACAATG---CGTTTGATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIIGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927542 [IV-Proteo4-c] PRGD_OTU011_8a3db1dda0ad9103e7fc5825fb859d7c gb|KJ927542| PRGD_OTU011_8a3db1dda0ad9103e7fc5825fb859d7c, putative proteorhodopsin gene, partial cds. PRGD_OTU011_8a3db1dda0ad9103e7fc5825fb859d7c, putative proteorhodopsin gene, partial cds. KJ927542 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTGATAACTGTTCCGCTTCAAATGGTTGAGTTCTACTTCATTCTTGCTGCCGTAACCGTCGTAAGTGCTGGAGTTTTCTGGCGTTTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGGGAAGCAGGATTAGCTCCAGCATGGCCAGCATTTATTGTCGGCATGGCTGGTTGGGGTTACATCCTTTATGAAATCTTCGCCGGTGAAGCCGGTCGGGTTTCTTCCGAGTCAGCCCCAGCGGGAGTTCAGTCTGCGTTCGGCACAATGCGTTTGATCGTAACTGTA LITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMAGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACTGTTCCGCTTCAAATGGTTGAGTTCTACTTCATTCTTGCTGCC---------GTA---ACCGTCGTAAGTGCT---GGAGTT------------------------------------TTCTGGCGT---TTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGGGAA---------GCA------------------GGA------TTA---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTTATTGTCGGCATGGCTGGTTGGGGTTACATCCTTTATGAAATC---------------TTC------GCC---GGTGAAGCCGGTCGGGTTTCTTCCGAG------TCA---GCCCCAGCGGGAGTT---CAG---TCT---GCG---TTC---GGC---ACAATG---CGTTTGATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMAGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927540 [IV-Proteo4-c] PRGD_OTU011_879e2406c989d9c8afc55f25471c04ef gb|KJ927540| PRGD_OTU011_879e2406c989d9c8afc55f25471c04ef, putative proteorhodopsin gene, partial cds. PRGD_OTU011_879e2406c989d9c8afc55f25471c04ef, putative proteorhodopsin gene, partial cds. KJ927540 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097) CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTCATTCTTGCAGCCGTAACCGTCGTAAGTGCTGGAGTTTTCTGGCGTTTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGGGAAGCAGGATTGGCTCCAGCATGGCCAGCATTTATTGTTGGCATGGCTGGTTGGGGTTACATCCTTTATGAAATCTTCGCCGGTGAAGCCGGTCGGGTTTCTTCCGAGTCAGCCCCAGCGGGAGTTCAGTCTGCGTTCGGTACAATGCGTTTGATAGTAACTGTA LITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMAGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTCATTCTTGCAGCC---------GTA---ACCGTCGTAAGTGCT---GGAGTT------------------------------------TTCTGGCGT---TTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGGGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTTATTGTTGGCATGGCTGGTTGGGGTTACATCCTTTATGAAATC---------------TTC------GCC---GGTGAAGCCGGTCGGGTTTCTTCCGAG------TCA---GCCCCAGCGGGAGTT---CAG---TCT---GCG---TTC---GGT---ACAATG---CGTTTGATAGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMAGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927533 [IV-Proteo4-c] PRGD_OTU011_6ef3375dd3bfebc217231abfc8fa3e74 gb|KJ927533| PRGD_OTU011_6ef3375dd3bfebc217231abfc8fa3e74, putative proteorhodopsin gene, partial cds. PRGD_OTU011_6ef3375dd3bfebc217231abfc8fa3e74, putative proteorhodopsin gene, partial cds. KJ927533 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATAACTGTTCCACTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCCGTAACCGTCGTAAGTGCTGGAGTTTTCTGGCGTTTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGAGAAGCAGGTTTGGCTCCAGCATGGCCAGCATTTATTGTCGGCATGCTAGGTTGGGGTTACATACTGTATGAAATCTTCGCCGGTGAAGCAGGTCGGGTTTCCTCCGAGTCAGCCCCAGCAGGAGTTCAGTCTGCGTTCGGTACAATGCGTTTGATCGTAACTGTT LITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACTGTTCCACTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCC---------GTA---ACCGTCGTAAGTGCT---GGAGTT------------------------------------TTCTGGCGT---TTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGAGAA---------GCA------------------GGT------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTTATTGTCGGCATGCTAGGTTGGGGTTACATACTGTATGAAATC---------------TTC------GCC---GGTGAAGCAGGTCGGGTTTCCTCCGAG------TCA---GCCCCAGCAGGAGTT---CAG---TCT---GCG---TTC---GGT---ACAATG---CGTTTGATCGTAACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927548 [IV-Proteo4-c] PRGD_OTU011_aaafe2313d0c4152cdad1ec1aa349ca3 gb|KJ927548| PRGD_OTU011_aaafe2313d0c4152cdad1ec1aa349ca3, putative proteorhodopsin gene, partial cds. PRGD_OTU011_aaafe2313d0c4152cdad1ec1aa349ca3, putative proteorhodopsin gene, partial cds. KJ927548 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATAACTGTTCCACTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCCGTAACCGTCGTAAGTGCTGGAGTTTTCTGGCGTTTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGAGAAGCAGGTTTGGCTCCAGCATGGCCAGCGTTTATTGTCGGCATGCTAGGTTGGGGTTACATACTGTATGAAATCTTCGCCGGTGAAGCGGGTCGGGTTTCCTCCGAGTCAGCCCCAGCAGGAGTTCAGTCTGCGTTCGGTACAATGCGTTTGATCGTAACTGTT LITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACTGTTCCACTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCC---------GTA---ACCGTCGTAAGTGCT---GGAGTT------------------------------------TTCTGGCGT---TTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGAGAA---------GCA------------------GGT------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCG---TTTATTGTCGGCATGCTAGGTTGGGGTTACATACTGTATGAAATC---------------TTC------GCC---GGTGAAGCGGGTCGGGTTTCCTCCGAG------TCA---GCCCCAGCAGGAGTT---CAG---TCT---GCG---TTC---GGT---ACAATG---CGTTTGATCGTAACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927517 [IV-Proteo4-c] PRGD_OTU011_2aa4e810086e294daf5a3ddfa8272949 gb|KJ927517| PRGD_OTU011_2aa4e810086e294daf5a3ddfa8272949, putative proteorhodopsin gene, partial cds. PRGD_OTU011_2aa4e810086e294daf5a3ddfa8272949, putative proteorhodopsin gene, partial cds. KJ927517 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (76.3333, 14.8833), Indian Ocean (-14.48, 113.45) CTGATAACTGTTCCACTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCCGTGACCGTCGTAAGTGCTGGAGTTTTCTGGCGTCTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGAGAAGCAGGATTGGCTCCAGCATGGCCAGCATTTATTGTCGGTATGCTTGGTTGGGGTTACATCCTTTATGAAATCTTCGCCGGTGAAGCGGGTCGGGTTTCCTCCGAGTCAGCCCCAGCGGGAGTTCAGTCTGCGTTCGGTACAATGCGTTTGATAGTAACTGTA LITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACTGTTCCACTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCC---------GTG---ACCGTCGTAAGTGCT---GGAGTT------------------------------------TTCTGGCGT---CTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGAGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTTATTGTCGGTATGCTTGGTTGGGGTTACATCCTTTATGAAATC---------------TTC------GCC---GGTGAAGCGGGTCGGGTTTCCTCCGAG------TCA---GCCCCAGCGGGAGTT---CAG---TCT---GCG---TTC---GGT---ACAATG---CGTTTGATAGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927528 [IV-Proteo4-c] PRGD_OTU011_51f0928b62400b35692e9cd75462f068 gb|KJ927528| PRGD_OTU011_51f0928b62400b35692e9cd75462f068, putative proteorhodopsin gene, partial cds. PRGD_OTU011_51f0928b62400b35692e9cd75462f068, putative proteorhodopsin gene, partial cds. KJ927528 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCGGTAACCGTCGTAAGTGCTGGAGTTTTCTGGCGTTTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTATATGGGAGAAGCAGGATTGGCTCCAGCGTGGCCAGCATTTATTGTCGGCATGCTAGGTTGGGGTTACATCCTCTATGAAATCTTCGCCGGTGAAGCGGGTCGGGTTTCCTCCGAGTCAGCCCCAGCGGGAGTTCAGTCTGCGTTCGGTACAATGCGTTTGATCGTAACTGTA LITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCG---------GTA---ACCGTCGTAAGTGCT---GGAGTT------------------------------------TTCTGGCGT---TTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTATATGGGAGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCG------------------TGGCCAGCA---TTTATTGTCGGCATGCTAGGTTGGGGTTACATCCTCTATGAAATC---------------TTC------GCC---GGTGAAGCGGGTCGGGTTTCCTCCGAG------TCA---GCCCCAGCGGGAGTT---CAG---TCT---GCG---TTC---GGT---ACAATG---CGTTTGATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927532 [IV-Proteo4-c] PRGD_OTU011_68d07a056dda9b5ff4b1a2cb4b0e7fbe gb|KJ927532| PRGD_OTU011_68d07a056dda9b5ff4b1a2cb4b0e7fbe, putative proteorhodopsin gene, partial cds. PRGD_OTU011_68d07a056dda9b5ff4b1a2cb4b0e7fbe, putative proteorhodopsin gene, partial cds. KJ927532 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683) CTGATAACTGTCCCGCTTCAAATGGTTGAATTCTATTTCATTCTTGCTGCCGTAACCGTCGTAAGTGCTGGAGTTTTCTGGCGTTTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGAGAAGCAGGATTGGCTCCAGCATGGCCAGCATTTATTGTCGGCATGCTTGGTTGGGGTTACATCCTTTATGAAATCTTCGCCGGTGAAGCGGGTCGGGTTTCCTCCGAGTCAGCCCCAGCTGGAGTTCAGTCTGCGTTTGGTACAATGCGTTTGATCGTAACTGTA LITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACTGTCCCGCTTCAAATGGTTGAATTCTATTTCATTCTTGCTGCC---------GTA---ACCGTCGTAAGTGCT---GGAGTT------------------------------------TTCTGGCGT---TTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGAGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTTATTGTCGGCATGCTTGGTTGGGGTTACATCCTTTATGAAATC---------------TTC------GCC---GGTGAAGCGGGTCGGGTTTCCTCCGAG------TCA---GCCCCAGCTGGAGTT---CAG---TCT---GCG---TTT---GGT---ACAATG---CGTTTGATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927547 [IV-Proteo4-c] PRGD_OTU011_a5df1e7803fd4a87df0234192fbd210f gb|KJ927547| PRGD_OTU011_a5df1e7803fd4a87df0234192fbd210f, putative proteorhodopsin gene, partial cds. PRGD_OTU011_a5df1e7803fd4a87df0234192fbd210f, putative proteorhodopsin gene, partial cds. KJ927547 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 01-juil-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCCGTAACCGTCGTAAGTGCCGGAGTTTTCTGGCGTTTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGAGAAGCAGGATTGGCTCCAGCATGGCCAGCATTTATTGTCGGCATGCTAGGATGGGGTTACATCCTTTATGAAATCTTCGCCGGTGAAGCGGGTCGGGTTTCCTCCGAGTCAGCCCCAGCGGGAGTTCAGTCGGCGTTCGGTACAATGCGTTTGATCGTAACTGTA LITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCC---------GTA---ACCGTCGTAAGTGCC---GGAGTT------------------------------------TTCTGGCGT---TTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGAGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTTATTGTCGGCATGCTAGGATGGGGTTACATCCTTTATGAAATC---------------TTC------GCC---GGTGAAGCGGGTCGGGTTTCCTCCGAG------TCA---GCCCCAGCGGGAGTT---CAG---TCG---GCG---TTC---GGT---ACAATG---CGTTTGATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927550 [IV-Proteo4-c] PRGD_OTU011_b90684ceddf95efae3725a1c158310ef gb|KJ927550| PRGD_OTU011_b90684ceddf95efae3725a1c158310ef, putative proteorhodopsin gene, partial cds. PRGD_OTU011_b90684ceddf95efae3725a1c158310ef, putative proteorhodopsin gene, partial cds. KJ927550 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833) CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCCGTAACCGTCGTAAGCGCTGGAGTTTTCTGGCGTTTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGAGAAGCAGGATTGGCTCCAGCATGGCCAGCATTTATTGTTGGCATGTTAGGTTGGGGTTACATCCTTTATGAAATCTTCGCCGGTGAAGCGGGTCGGGTTTCCTCCGAGTCAGCCCCAGCGGGAGTTCAGTCTGCCTTCGGTACAATGCGCTTGATCGTAACGGTA LITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCC---------GTA---ACCGTCGTAAGCGCT---GGAGTT------------------------------------TTCTGGCGT---TTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGAGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTTATTGTTGGCATGTTAGGTTGGGGTTACATCCTTTATGAAATC---------------TTC------GCC---GGTGAAGCGGGTCGGGTTTCCTCCGAG------TCA---GCCCCAGCGGGAGTT---CAG---TCT---GCC---TTC---GGT---ACAATG---CGCTTGATCGTAACGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927560 [IV-Proteo4-c] PRGD_OTU011_f6949004f485293761db2702a6bcd031 gb|KJ927560| PRGD_OTU011_f6949004f485293761db2702a6bcd031, putative proteorhodopsin gene, partial cds. PRGD_OTU011_f6949004f485293761db2702a6bcd031, putative proteorhodopsin gene, partial cds. KJ927560 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683) CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCCGTAACCGTCGTAAGCGCTGGAGTTTTCTGGCGTTTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGAGAAGCAGGATTGGCTCCAGCATGGCCAGCATTTATTGTCGGCATGCTAGGTTGGGGTTACATCCTTTATGAAATCTTCGCCGGTGAAGCGGGTCGGGTTTCCTCCGAGTCAGCCCCAGCGGGAGTTCAGTCTGCCTTCGGTACAATGCGCTTGATCGTAACGGTA LITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCC---------GTA---ACCGTCGTAAGCGCT---GGAGTT------------------------------------TTCTGGCGT---TTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGAGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTTATTGTCGGCATGCTAGGTTGGGGTTACATCCTTTATGAAATC---------------TTC------GCC---GGTGAAGCGGGTCGGGTTTCCTCCGAG------TCA---GCCCCAGCGGGAGTT---CAG---TCT---GCC---TTC---GGT---ACAATG---CGCTTGATCGTAACGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927512 [IV-Proteo4-c] PRGD_OTU011_1fbec76735f2996901e8b935da486127 gb|KJ927512| PRGD_OTU011_1fbec76735f2996901e8b935da486127, putative proteorhodopsin gene, partial cds. PRGD_OTU011_1fbec76735f2996901e8b935da486127, putative proteorhodopsin gene, partial cds. KJ927512 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACTGTTCCACTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCGGTAACTGTTGTAAGCGCTGGAGTTTTCTGGCGTTTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGTGAAGCAGGATTGGCTCCAGCATGGCCAGCATTCATTGTCGGCATGCTAGGTTGGGGTTACATCCTTTATGAAATCTTCGCCGGTGAAGCGGGTCGGGTTTCTTCCGAGTCAGCCCCAGCGGGAGTTCAGTCGGCCTTCGGTACAATGCGCTTGATCGTAACGGTA LITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTTCCACTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCG---------GTA---ACTGTTGTAAGCGCT---GGAGTT------------------------------------TTCTGGCGT---TTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTACATGGGTGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTCATTGTCGGCATGCTAGGTTGGGGTTACATCCTTTATGAAATC---------------TTC------GCC---GGTGAAGCGGGTCGGGTTTCTTCCGAG------TCA---GCCCCAGCGGGAGTT---CAG---TCG---GCC---TTC---GGT---ACAATG---CGCTTGATCGTAACGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927522 [IV-Proteo4-c] PRGD_OTU011_3416132c41df91124f2efbabbf5f4b03 gb|KJ927522| PRGD_OTU011_3416132c41df91124f2efbabbf5f4b03, putative proteorhodopsin gene, partial cds. PRGD_OTU011_3416132c41df91124f2efbabbf5f4b03, putative proteorhodopsin gene, partial cds. KJ927522 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTTATCCTTGCTGCAGTCACTGTCGTAAGCGCTGGAGTTTTCTGGCGTTTGATGATTGGATCGCTTGTGATGTTGGTTGCAGGTTACATGGGAGAGGCAGGATTGGCTCCAGCATGGCCAGCATTCATTGTCGGTATGCTAGGATGGGGTTATATCTTATATGAAATCTTCGCCGGTGAAGCTGGACGGGTTTCCTCAGAGTCAGCCCCAGCGGGAGTTCAGTCAGCCTTTGGTACAATGCGCTTGATCGTAACTGTA LITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTTATCCTTGCTGCA---------GTC---ACTGTCGTAAGCGCT---GGAGTT------------------------------------TTCTGGCGT---TTGATGATTGGATCGCTTGTGATGTTGGTTGCAGGTTACATGGGAGAG---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTCATTGTCGGTATGCTAGGATGGGGTTATATCTTATATGAAATC---------------TTC------GCC---GGTGAAGCTGGACGGGTTTCCTCAGAG------TCA---GCCCCAGCGGGAGTT---CAG---TCA---GCC---TTT---GGT---ACAATG---CGCTTGATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927555 [IV-Proteo4-c] PRGD_OTU011_d92f07386b99a488986a00657f58fdb0 gb|KJ927555| PRGD_OTU011_d92f07386b99a488986a00657f58fdb0, putative proteorhodopsin gene, partial cds. PRGD_OTU011_d92f07386b99a488986a00657f58fdb0, putative proteorhodopsin gene, partial cds. KJ927555 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTTATCCTTGCTGCAGTCACTGTCGTAAGCGCTGGAGTTTTCTGGCGTTTGATGATTGGATCGCTTGTGATGTTGGTTGCAGGTTACATGGGAGAGGCAGGATTGGCTCCAGCATGGCCAGCATTCATTGTCGGCATGCTAGGATGGGGTTATATCTTATATGAAATCTTCGCCGGTGAAGCTGGCCGGGTTTCCTCAGAGTCAGCCCCAGCAGGAGTTCAGTCAGCCTTTGGTACAATGCGCCTGATCGTAACTGTA LITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTTATCCTTGCTGCA---------GTC---ACTGTCGTAAGCGCT---GGAGTT------------------------------------TTCTGGCGT---TTGATGATTGGATCGCTTGTGATGTTGGTTGCAGGTTACATGGGAGAG---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTCATTGTCGGCATGCTAGGATGGGGTTATATCTTATATGAAATC---------------TTC------GCC---GGTGAAGCTGGCCGGGTTTCCTCAGAG------TCA---GCCCCAGCAGGAGTT---CAG---TCA---GCC---TTT---GGT---ACAATG---CGCCTGATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927523 [IV-Proteo4-c] PRGD_OTU011_34220e05c37a1a5f6006ead9b50a254a gb|KJ927523| PRGD_OTU011_34220e05c37a1a5f6006ead9b50a254a, putative proteorhodopsin gene, partial cds. PRGD_OTU011_34220e05c37a1a5f6006ead9b50a254a, putative proteorhodopsin gene, partial cds. KJ927523 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTTATCCTTGCTGCAGTCACTGTCGTAAGCGCTGGAGTTTTCTGGCGTTTGATGATTGGATCGCTTGTGATGTTGGTTGCAGGTTACATGGGAGAGGCAGGATTGGCTCCAGCATGGCCAGCATTCATTGTCGGCATGCTAGGATGGGGTTACATCCTTTATGAAATCTTCGCCGGTGAAGCTGGACGGGTTTCCTCAGAGTCAGCCCCAGCGGGAGTTCAGTCAGCCTTTGGTACAATGCGCTTGATCGTAACTGTA LITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTTATCCTTGCTGCA---------GTC---ACTGTCGTAAGCGCT---GGAGTT------------------------------------TTCTGGCGT---TTGATGATTGGATCGCTTGTGATGTTGGTTGCAGGTTACATGGGAGAG---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTCATTGTCGGCATGCTAGGATGGGGTTACATCCTTTATGAAATC---------------TTC------GCC---GGTGAAGCTGGACGGGTTTCCTCAGAG------TCA---GCCCCAGCGGGAGTT---CAG---TCA---GCC---TTT---GGT---ACAATG---CGCTTGATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927506 [IV-Proteo4-c] PRGD_OTU011_0413d6e46ffa7a006ec1c18236f3bcc9 gb|KJ927506| PRGD_OTU011_0413d6e46ffa7a006ec1c18236f3bcc9, putative proteorhodopsin gene, partial cds. PRGD_OTU011_0413d6e46ffa7a006ec1c18236f3bcc9, putative proteorhodopsin gene, partial cds. KJ927506 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTTATCCTTGCTGCCGTCACTGTCGTAAGCGCTGGAGTTTTCTGGCGTTTGATGATTGGCTCGCTTGTGATGTTGGTTGCAGGTTACATGGGAGAGGCAGGATTGGCTCCAGCATGGCCAGCATTCATTGTCGGCATGCTTGGGTGGGGTTACATCCTATATGAAATCTTCGCCGGTGAAGCTGGTCGGGTTTCCTCAGAGTCAGCCCCAGCGGGAGTTCAGTCAGCCTTTGGTACAATGCGCCTGATCGTAACTGTA LITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTTATCCTTGCTGCC---------GTC---ACTGTCGTAAGCGCT---GGAGTT------------------------------------TTCTGGCGT---TTGATGATTGGCTCGCTTGTGATGTTGGTTGCAGGTTACATGGGAGAG---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTCATTGTCGGCATGCTTGGGTGGGGTTACATCCTATATGAAATC---------------TTC------GCC---GGTGAAGCTGGTCGGGTTTCCTCAGAG------TCA---GCCCCAGCGGGAGTT---CAG---TCA---GCC---TTT---GGT---ACAATG---CGCCTGATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927518 [IV-Proteo4-c] PRGD_OTU011_2c9ab81489a4d31875cb90d72bff095b gb|KJ927518| PRGD_OTU011_2c9ab81489a4d31875cb90d72bff095b, putative proteorhodopsin gene, partial cds. PRGD_OTU011_2c9ab81489a4d31875cb90d72bff095b, putative proteorhodopsin gene, partial cds. KJ927518 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTTATCCTTGCTGCCGTCACTGTCGTAAGCGCTGGAGTTTTCTGGCGGTTGATGATTGGCTCGCTTGTGATGTTGGTTGCAGGTTACATGGGAGAGGCAGGATTGGCTCCAGCATGGCCAGCATTCATTGTCGGCATGCTAGGATGGGGTTATATCCTATATGAAATCTTCGCCGGTGAAGCTGGTCGGGTTTCCTCAGAGTCAGCCCCAGCGGGAGTTCAGTCAGCCTTTGGTACAATGCGCCTGATCGTAACTGTA LITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTTATCCTTGCTGCC---------GTC---ACTGTCGTAAGCGCT---GGAGTT------------------------------------TTCTGGCGG---TTGATGATTGGCTCGCTTGTGATGTTGGTTGCAGGTTACATGGGAGAG---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTCATTGTCGGCATGCTAGGATGGGGTTATATCCTATATGAAATC---------------TTC------GCC---GGTGAAGCTGGTCGGGTTTCCTCAGAG------TCA---GCCCCAGCGGGAGTT---CAG---TCA---GCC---TTT---GGT---ACAATG---CGCCTGATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927553 [IV-Proteo4-c] PRGD_OTU011_cdb3ae58a67390c50384b1715a04c6b4 gb|KJ927553| PRGD_OTU011_cdb3ae58a67390c50384b1715a04c6b4, putative proteorhodopsin gene, partial cds. PRGD_OTU011_cdb3ae58a67390c50384b1715a04c6b4, putative proteorhodopsin gene, partial cds. KJ927553 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) CTGATCACTGTTCCGCTTCAAATGGTTGAATTCTACTTTATCCTTGCTGCCGTCACTGTCGTAAGCGCTGGAGTTTTCTGGCGTTTGATGATTGGCTCGCTTGTGATGTTGGTTGCAGGTTACATGGGAGAGGCAGGATTGGCTCCAGCATGGCCAGCATTCATTGTCGGCATGCTAGGATGGGGTTACATCCTTTATGAAATCTTCGCCGGTGAAGCTGGTCGGGTTTCCTCAGAATCAGCCCCAGCGGGAGTTCAGTCAGCCTTTGGTACAATGCGCTTGATCGTAACTGTA LITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTTCCGCTTCAAATGGTTGAATTCTACTTTATCCTTGCTGCC---------GTC---ACTGTCGTAAGCGCT---GGAGTT------------------------------------TTCTGGCGT---TTGATGATTGGCTCGCTTGTGATGTTGGTTGCAGGTTACATGGGAGAG---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTCATTGTCGGCATGCTAGGATGGGGTTACATCCTTTATGAAATC---------------TTC------GCC---GGTGAAGCTGGTCGGGTTTCCTCAGAA------TCA---GCCCCAGCGGGAGTT---CAG---TCA---GCC---TTT---GGT---ACAATG---CGCTTGATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927561 [IV-Proteo4-c] PRGD_OTU011_f9a5549ad4a8d34a9a699d45b3694511 gb|KJ927561| PRGD_OTU011_f9a5549ad4a8d34a9a699d45b3694511, putative proteorhodopsin gene, partial cds. PRGD_OTU011_f9a5549ad4a8d34a9a699d45b3694511, putative proteorhodopsin gene, partial cds. KJ927561 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTTATCCTTGCTGCCGTCACTGTCGTAAGCGCTGGAGTTTTCTGGCGTTTGATGATTGGCTCGCTTGTGATGTTGGTTGCAGGTTACATGGGAGAGGCAGGATTGGCTCCAGCATGGCCAGCATTCATTGTCGGCATGCTAGGATGGGGTTATATCCTTTATGAAATCTTCGCCGGTGAGGCTGGTCGGGTTTCATCAGAGTCAGCCCCAGCGGGAGTTCAGTCAGCCTTTGGTACAATGCGCTTGATCGTAACTGTA LITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTTATCCTTGCTGCC---------GTC---ACTGTCGTAAGCGCT---GGAGTT------------------------------------TTCTGGCGT---TTGATGATTGGCTCGCTTGTGATGTTGGTTGCAGGTTACATGGGAGAG---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTCATTGTCGGCATGCTAGGATGGGGTTATATCCTTTATGAAATC---------------TTC------GCC---GGTGAGGCTGGTCGGGTTTCATCAGAG------TCA---GCCCCAGCGGGAGTT---CAG---TCA---GCC---TTT---GGT---ACAATG---CGCTTGATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927521 [IV-Proteo4-c] PRGD_OTU011_33f5a1d0dca08e1ee21920d57559ecef gb|KJ927521| PRGD_OTU011_33f5a1d0dca08e1ee21920d57559ecef, putative proteorhodopsin gene, partial cds. PRGD_OTU011_33f5a1d0dca08e1ee21920d57559ecef, putative proteorhodopsin gene, partial cds. KJ927521 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTTATCCTTGCTGCCGTCACTGTCGTAAGCGCTGGCGTTTTCTGGCGTTTGATGATTGGCTCGCTTGTGATGTTGGTTGCAGGTTACATGGGAGAGGCAGGATTGGCTCCAGCATGGCCAGCATTCATTGTCGGCATGCTAGGATGGGGTTATATCCTTTATGAAATCTTCGCCGGTGAAGCTGGTCGGGTTTCCTCAGAGTCAGCCCCAGCGGGAGTTCAGTCAGCCTTTGGTACAATGCGCTTGATCGTAACTGTA LITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTTATCCTTGCTGCC---------GTC---ACTGTCGTAAGCGCT---GGCGTT------------------------------------TTCTGGCGT---TTGATGATTGGCTCGCTTGTGATGTTGGTTGCAGGTTACATGGGAGAG---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTCATTGTCGGCATGCTAGGATGGGGTTATATCCTTTATGAAATC---------------TTC------GCC---GGTGAAGCTGGTCGGGTTTCCTCAGAG------TCA---GCCCCAGCGGGAGTT---CAG---TCA---GCC---TTT---GGT---ACAATG---CGCTTGATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927516 [IV-Proteo4-c] PRGD_OTU011_298edfb798eadc9e84c1a32ca71c3367 gb|KJ927516| PRGD_OTU011_298edfb798eadc9e84c1a32ca71c3367, putative proteorhodopsin gene, partial cds. PRGD_OTU011_298edfb798eadc9e84c1a32ca71c3367, putative proteorhodopsin gene, partial cds. KJ927516 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTTATCCTTGCTGCCGTCACTGTCGTAAGCGCTGGAGTTTTCTGGCGTTTGATGATTGGCTCGCTAGTGATGTTGGTTGCGGGTTACATGGGAGAGGCAGGATTGGCTCCAGCATGGCCAGCATTCATTGTCGGCATGCTAGGATGGGGTTATATCCTTTATGAAATCTTCGCCGGTGAAGCTGGTCGGGTTTCATCAGAGTCAGCCCCAGCAGGAGTTCAGTCAGCCTTTGGTACAATGCGCTTGATCGTAACTGTA LITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTTATCCTTGCTGCC---------GTC---ACTGTCGTAAGCGCT---GGAGTT------------------------------------TTCTGGCGT---TTGATGATTGGCTCGCTAGTGATGTTGGTTGCGGGTTACATGGGAGAG---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTCATTGTCGGCATGCTAGGATGGGGTTATATCCTTTATGAAATC---------------TTC------GCC---GGTGAAGCTGGTCGGGTTTCATCAGAG------TCA---GCCCCAGCAGGAGTT---CAG---TCA---GCC---TTT---GGT---ACAATG---CGCTTGATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927544 [IV-Proteo4-c] PRGD_OTU011_8ea2b373a819511b999840c4746cacef gb|KJ927544| PRGD_OTU011_8ea2b373a819511b999840c4746cacef, putative proteorhodopsin gene, partial cds. PRGD_OTU011_8ea2b373a819511b999840c4746cacef, putative proteorhodopsin gene, partial cds. KJ927544 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097) CTAATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTTATCCTTGCTGCAGTCACTGTCGTAAGCGCTGGAGTTTTCTGGCGTTTGATGATTGGCTCGCTAGTGATGTTGGTTGCAGGTTACATGGGAGAAGCAGGATTAGCTCCAGCATGGCCAGCATTTATCGTCGGCATGCTAGGATGGGGTTATATCCTCTATGAAATCTTTGCCGGTGAAGCTGGTCGGGTTTCCTCTGAGTCAGCCCCAGCGGGAGTTCAGTCAGCCTTTGGTACAATGCGCTTGATCGTAACTGTA LITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTTATCCTTGCTGCA---------GTC---ACTGTCGTAAGCGCT---GGAGTT------------------------------------TTCTGGCGT---TTGATGATTGGCTCGCTAGTGATGTTGGTTGCAGGTTACATGGGAGAA---------GCA------------------GGA------TTA---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTTATCGTCGGCATGCTAGGATGGGGTTATATCCTCTATGAAATC---------------TTT------GCC---GGTGAAGCTGGTCGGGTTTCCTCTGAG------TCA---GCCCCAGCGGGAGTT---CAG---TCA---GCC---TTT---GGT---ACAATG---CGCTTGATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927509 [IV-Proteo4-c] PRGD_OTU011_14a6646106d3b03d4ac4621ab877f7bd gb|KJ927509| PRGD_OTU011_14a6646106d3b03d4ac4621ab877f7bd, putative proteorhodopsin gene, partial cds. PRGD_OTU011_14a6646106d3b03d4ac4621ab877f7bd, putative proteorhodopsin gene, partial cds. KJ927509 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATAACCGTTCCGCTTCAAATGGTTGAATTCTACTTTATCCTTGCCGCGGTTACCGTTGTAAGCGCTGGAGTGTTCTGGCGTTTGATGATTGGCTCGCTAGTGATGTTGGTTGCAGGTTACATGGGAGAAGCAGGATTGGCTCCAGCATGGCCAGCATTCATTGTCGGCATGCTAGGATGGGGTTACATCCTCTATGAAATCTTCGCTGGTGAAGCTGGTCGGGTTTCCTCAGAGTCAGCCCCAGCGGGAGTTCAGTCAGCCTTTGGTACAATGCGCTTGATCGTAACTGTA LITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTTCCGCTTCAAATGGTTGAATTCTACTTTATCCTTGCCGCG---------GTT---ACCGTTGTAAGCGCT---GGAGTG------------------------------------TTCTGGCGT---TTGATGATTGGCTCGCTAGTGATGTTGGTTGCAGGTTACATGGGAGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTCATTGTCGGCATGCTAGGATGGGGTTACATCCTCTATGAAATC---------------TTC------GCT---GGTGAAGCTGGTCGGGTTTCCTCAGAG------TCA---GCCCCAGCGGGAGTT---CAG---TCA---GCC---TTT---GGT---ACAATG---CGCTTGATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927537 [IV-Proteo4-c] PRGD_OTU011_7edfa9b5abb9a3dee5aea569680a7389 gb|KJ927537| PRGD_OTU011_7edfa9b5abb9a3dee5aea569680a7389, putative proteorhodopsin gene, partial cds. PRGD_OTU011_7edfa9b5abb9a3dee5aea569680a7389, putative proteorhodopsin gene, partial cds. KJ927537 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTGATAACCGTTCCGCTTCAAATGGTTGAATTCTACTTTATCCTTGCCGCGGTTACCGTTGTAAGCGCTGGAGTCTTCTGGCGTTTGATGATTGGCTCGCTAGTGATGTTGGTTGCAGGTTACATGGGAGAAGCAGGATTGGCTCCAGCATGGCCAGCATTCATTGTCGGCATGCTAGGATGGGGTTACATCCTCTATGAAATCTTCGCCGGTGAAGCTGGTCGGGTTTCCTCAGAGTCAGCCCCAGCGGGAGTTCAGTCAGCCTTTGGTACAATGCGCTTGATCGTGACTGTA LITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTTCCGCTTCAAATGGTTGAATTCTACTTTATCCTTGCCGCG---------GTT---ACCGTTGTAAGCGCT---GGAGTC------------------------------------TTCTGGCGT---TTGATGATTGGCTCGCTAGTGATGTTGGTTGCAGGTTACATGGGAGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTCATTGTCGGCATGCTAGGATGGGGTTACATCCTCTATGAAATC---------------TTC------GCC---GGTGAAGCTGGTCGGGTTTCCTCAGAG------TCA---GCCCCAGCGGGAGTT---CAG---TCA---GCC---TTT---GGT---ACAATG---CGCTTGATCGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927525 [IV-Proteo4-c] PRGD_OTU011_3f18c695e46eb6a92e340472217b91b4 gb|KJ927525| PRGD_OTU011_3f18c695e46eb6a92e340472217b91b4, putative proteorhodopsin gene, partial cds. PRGD_OTU011_3f18c695e46eb6a92e340472217b91b4, putative proteorhodopsin gene, partial cds. KJ927525 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), North Pacific Ocean (50.06, -139.53), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419) CTGATAACCGTTCCACTTCAAATGGTTGAATTCTACTTTATCCTTGCCGCGGTTACCGTTGTAAGCGCTGGAGTCTTCTGGCGTTTGATGATTGGCTCGCTGGTGATGTTGGTTGCAGGTTACATGGGAGAAGCAGGATTGGCTCCAGCATGGCCAGCATTCATTGTCGGCATGCTAGGATGGGGTTACATCCTCTATGAAATCTTCGCCGGTGAAGCTGGTCGGGTTTCCTCAGAGTCAGCCCCAGCGGGAGTTCAGTCAGCCTTTGGTACAATGCGCTTGATCGTAACTGTA LITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTTCCACTTCAAATGGTTGAATTCTACTTTATCCTTGCCGCG---------GTT---ACCGTTGTAAGCGCT---GGAGTC------------------------------------TTCTGGCGT---TTGATGATTGGCTCGCTGGTGATGTTGGTTGCAGGTTACATGGGAGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTCATTGTCGGCATGCTAGGATGGGGTTACATCCTCTATGAAATC---------------TTC------GCC---GGTGAAGCTGGTCGGGTTTCCTCAGAG------TCA---GCCCCAGCGGGAGTT---CAG---TCA---GCC---TTT---GGT---ACAATG---CGCTTGATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927531 [IV-Proteo4-c] PRGD_OTU011_654fa7f4ff382397f4775df320e59d5e gb|KJ927531| PRGD_OTU011_654fa7f4ff382397f4775df320e59d5e, putative proteorhodopsin gene, partial cds. PRGD_OTU011_654fa7f4ff382397f4775df320e59d5e, putative proteorhodopsin gene, partial cds. KJ927531 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Indian Ocean (-35.05, 23.73) CTGATTACCGTTCCGCTTCAAATGGTTGAATTCTACTTTATCCTTGCCGCGGTTACCGTTGTAAGCGCTGGAGTCTTCTGGCGTTTGATGATTGGCTCGCTAGTGATGTTGGTTGCAGGTTACATGGGAGAAGCAGGATTGGCTCCAGCATGGCCAGCATTCATTGTCGGCATGCTAGGATGGGGTTACATCCTCTATGAAATCTTCGCCGGTGAAGCTGGTCGGGTTTCCTCAGAGTCAGCTCCAGCGGGAGTTCAGTCAGCCTTTGGTACAATGCGCTTGATCGTAACTGTA LITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACCGTTCCGCTTCAAATGGTTGAATTCTACTTTATCCTTGCCGCG---------GTT---ACCGTTGTAAGCGCT---GGAGTC------------------------------------TTCTGGCGT---TTGATGATTGGCTCGCTAGTGATGTTGGTTGCAGGTTACATGGGAGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTCATTGTCGGCATGCTAGGATGGGGTTACATCCTCTATGAAATC---------------TTC------GCC---GGTGAAGCTGGTCGGGTTTCCTCAGAG------TCA---GCTCCAGCGGGAGTT---CAG---TCA---GCC---TTT---GGT---ACAATG---CGCTTGATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927545 [IV-Proteo4-c] PRGD_OTU011_959df2e4c30c38eb78baf55d14781b3b gb|KJ927545| PRGD_OTU011_959df2e4c30c38eb78baf55d14781b3b, putative proteorhodopsin gene, partial cds. PRGD_OTU011_959df2e4c30c38eb78baf55d14781b3b, putative proteorhodopsin gene, partial cds. KJ927545 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTTATCCTTGCTGCGGTAACCGTCGTAAGCGCTGGTGTCTTCTGGCGTTTGATGATTGGTTCACTAGTGATGTTGGTTGCAGGCTACATGGGAGAAGCAGGATTGGCTCCAGCATGGCCAGCATTTATCATCGGCATGCTAGGATGGGGTTATATCCTCTATGAAATCTTCGCCGGCGAAGCTGGTCGGGTTTCCTCAGAGTCAGCTCCAGCAGGAGTTCAGTCAGCCTTTGGAACAATGCGCTTGATCGTAACTGTT LITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIIGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTTATCCTTGCTGCG---------GTA---ACCGTCGTAAGCGCT---GGTGTC------------------------------------TTCTGGCGT---TTGATGATTGGTTCACTAGTGATGTTGGTTGCAGGCTACATGGGAGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTTATCATCGGCATGCTAGGATGGGGTTATATCCTCTATGAAATC---------------TTC------GCC---GGCGAAGCTGGTCGGGTTTCCTCAGAG------TCA---GCTCCAGCAGGAGTT---CAG---TCA---GCC---TTT---GGA---ACAATG---CGCTTGATCGTAACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIIGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927520 [IV-Proteo4-c] PRGD_OTU011_31b830288d0b4fc1dac2690829b77cbf gb|KJ927520| PRGD_OTU011_31b830288d0b4fc1dac2690829b77cbf, putative proteorhodopsin gene, partial cds. PRGD_OTU011_31b830288d0b4fc1dac2690829b77cbf, putative proteorhodopsin gene, partial cds. KJ927520 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Indian Ocean (-33.28, 45.35) CTTATAACTGTTCCACTTCAGATGGTTGAATTCTACTTTATTCTTGCTGCTGTAACCGTCGTAAGCGCTGGAGTCTTCTGGCGTTTGATGATTGGCTCACTAGTGATGCTGGTTGCAGGCTACATGGGAGAAGCAGGATTGGCTCCAGCATGGCCAGCATTTATTGTCGGCATGCTAGGTTGGGGTTACATCCTTTATGAGATCTTCGCCGGTGAAGCGGGTCGGGTTTCCTCAGAGTCAGCCCCAGCGGGAGTTCAGTCCGCCTTCGGTACAATGCGCTTGATCGTAACGGTA LITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATAACTGTTCCACTTCAGATGGTTGAATTCTACTTTATTCTTGCTGCT---------GTA---ACCGTCGTAAGCGCT---GGAGTC------------------------------------TTCTGGCGT---TTGATGATTGGCTCACTAGTGATGCTGGTTGCAGGCTACATGGGAGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTTATTGTCGGCATGCTAGGTTGGGGTTACATCCTTTATGAGATC---------------TTC------GCC---GGTGAAGCGGGTCGGGTTTCCTCAGAG------TCA---GCCCCAGCGGGAGTT---CAG---TCC---GCC---TTC---GGT---ACAATG---CGCTTGATCGTAACGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927543 [IV-Proteo4-c] PRGD_OTU011_8b564b4051e56218f8ae0d61a52bf376 gb|KJ927543| PRGD_OTU011_8b564b4051e56218f8ae0d61a52bf376, putative proteorhodopsin gene, partial cds. PRGD_OTU011_8b564b4051e56218f8ae0d61a52bf376, putative proteorhodopsin gene, partial cds. KJ927543 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Mediterranean Sea (33.762, 29.175), Indian Ocean (-14.48, 113.45; -33.28, 45.35) CTTATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTTATCCTTGCTGCGGTAACCGTCGTAAGCGCTGGGGTCTTCTGGCGTTTGATGATTGGCTCACTAGTGATGCTGGTTGCAGGCTACATGGGAGAAGCAGGATTGGCTCCAGCATGGCCAGCATTTATTGTCGGCATGCTAGGTTGGGGTTACATCCTTTATGAGATCTTCGCCGGTGAAGCAGGTCGGGTTTCCTCAGAGTCAGCCCCAGCGGGAGTTCAGTCCGCCTTCGGTACAATGCGCTTGATCGTAACGGTA LITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTTATCCTTGCTGCG---------GTA---ACCGTCGTAAGCGCT---GGGGTC------------------------------------TTCTGGCGT---TTGATGATTGGCTCACTAGTGATGCTGGTTGCAGGCTACATGGGAGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTTATTGTCGGCATGCTAGGTTGGGGTTACATCCTTTATGAGATC---------------TTC------GCC---GGTGAAGCAGGTCGGGTTTCCTCAGAG------TCA---GCCCCAGCGGGAGTT---CAG---TCC---GCC---TTC---GGT---ACAATG---CGCTTGATCGTAACGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927507 [IV-Proteo4-c] PRGD_OTU011_0df40f441061207fa53238bc8e6ed921 gb|KJ927507| PRGD_OTU011_0df40f441061207fa53238bc8e6ed921, putative proteorhodopsin gene, partial cds. PRGD_OTU011_0df40f441061207fa53238bc8e6ed921, putative proteorhodopsin gene, partial cds. KJ927507 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833) CTGATAACTGTTCCGCTCCAAATGGTTGAATTCTACTTTATCCTTGCTGCAGTCACCGTAGTAAGCTCTGGGGTCTTCTGGCGTTTGATGATTGGCTCGCTAGTGATGTTGGTTGCAGGCTACATGGGTGAAGCAGGATTGGCTCCAGCATGGCCAGCATTTATTGTTGGCATGTTAGGTTGGGGTTACATCCTTTATGAAATCTTCGCCGGTGAAGCGGGTCGGGTTTCCTCCGAATCAGCACCAGCGGGAGTTCAGTCTGCGTTCGGCACAATGCGTTTGATCGTAACTGTA LITVPLQMVEFYFILAAVTVVSSGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACTGTTCCGCTCCAAATGGTTGAATTCTACTTTATCCTTGCTGCA---------GTC---ACCGTAGTAAGCTCT---GGGGTC------------------------------------TTCTGGCGT---TTGATGATTGGCTCGCTAGTGATGTTGGTTGCAGGCTACATGGGTGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTTATTGTTGGCATGTTAGGTTGGGGTTACATCCTTTATGAAATC---------------TTC------GCC---GGTGAAGCGGGTCGGGTTTCCTCCGAA------TCA---GCACCAGCGGGAGTT---CAG---TCT---GCG---TTC---GGC---ACAATG---CGTTTGATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSS-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927519 [IV-Proteo4-c] PRGD_OTU011_2f246a48f611401331be36a9b923e13b gb|KJ927519| PRGD_OTU011_2f246a48f611401331be36a9b923e13b, putative proteorhodopsin gene, partial cds. PRGD_OTU011_2f246a48f611401331be36a9b923e13b, putative proteorhodopsin gene, partial cds. KJ927519 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175; 33.935, 18.508), Indian Ocean (-23.5956, 69.0419) CTGATAACTGTTCCACTCCAAATGGTTGAATTCTACTTTATCCTTGCTGCAGTCACCGTAGTGAGCTCTGGGGTCTTCTGGCGTTTGATGATTGGCTCGCTAGTGATGTTGGTTGCAGGCTACATGGGTGAAGCAGGATTGGCTCCAGCATGGCCAGCATTTATTGTTGGCATGTTAGGTTGGGGTTACATCCTTTATGAAATCTTCGCCGGTGAAGCGGGTCGGGTTTCATCCGAGTCAGCCCCAGCGGGAGTTCAGTCTGCCTTCGGTACAATGCGCTTGATTGTAACGGTA LITVPLQMVEFYFILAAVTVVSSGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACTGTTCCACTCCAAATGGTTGAATTCTACTTTATCCTTGCTGCA---------GTC---ACCGTAGTGAGCTCT---GGGGTC------------------------------------TTCTGGCGT---TTGATGATTGGCTCGCTAGTGATGTTGGTTGCAGGCTACATGGGTGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTTATTGTTGGCATGTTAGGTTGGGGTTACATCCTTTATGAAATC---------------TTC------GCC---GGTGAAGCGGGTCGGGTTTCATCCGAG------TCA---GCCCCAGCGGGAGTT---CAG---TCT---GCC---TTC---GGT---ACAATG---CGCTTGATTGTAACGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSS-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927530 [IV-Proteo4-c] PRGD_OTU011_5ef6dac53e713ac9e6013a1a4e7e0e1e gb|KJ927530| PRGD_OTU011_5ef6dac53e713ac9e6013a1a4e7e0e1e, putative proteorhodopsin gene, partial cds. PRGD_OTU011_5ef6dac53e713ac9e6013a1a4e7e0e1e, putative proteorhodopsin gene, partial cds. KJ927530 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) CTGATAACTGTTCCGCTCCAAATGGTTGAATTCTACTTTATCCTTGCTGCAGTCACCGTAGTAAGCTCTGGGGTCTTCTGGCGTTTGATGATTGGCTCGCTAGTGATGTTGGTTGCAGGCTACATGGGTGAAGCAGGATTGGCTCCAGCATGGCCAGCATTTATTGTTGGCATGTTAGGTTGGGGTTACATCCTTTATGAAATCTTCGCCGGTGAAGCGGGTCGGGTTTCCTCCGAGTCAGCCCCAGCGGGAGTTCAGTCTGCCTTCGGTACAATGCGCTTGATCGTAACGGTA LITVPLQMVEFYFILAAVTVVSSGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACTGTTCCGCTCCAAATGGTTGAATTCTACTTTATCCTTGCTGCA---------GTC---ACCGTAGTAAGCTCT---GGGGTC------------------------------------TTCTGGCGT---TTGATGATTGGCTCGCTAGTGATGTTGGTTGCAGGCTACATGGGTGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTTATTGTTGGCATGTTAGGTTGGGGTTACATCCTTTATGAAATC---------------TTC------GCC---GGTGAAGCGGGTCGGGTTTCCTCCGAG------TCA---GCCCCAGCGGGAGTT---CAG---TCT---GCC---TTC---GGT---ACAATG---CGCTTGATCGTAACGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSS-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927551 [IV-Proteo4-c] PRGD_OTU011_ba3bb0bccf5df5812e31febcdb24de60 gb|KJ927551| PRGD_OTU011_ba3bb0bccf5df5812e31febcdb24de60, putative proteorhodopsin gene, partial cds. PRGD_OTU011_ba3bb0bccf5df5812e31febcdb24de60, putative proteorhodopsin gene, partial cds. KJ927551 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATAACTGTTCCGCTCCAAATGGTTGAATTCTACTTTATCCTTGCTGCAGTCACCGTAGTAAGCTCTGGGGTCTTCTGGCGTTTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTATATGGGAGAAGCAGGATTGGCTCCAGCATGGCCAGCATTTATTGTTGGCATGTTAGGTTGGGGTTACATCCTTTATGAAATCTTCGCCGGTGAAGCGGGTCGGGTTTCCTCCGAGTCAGCCCCAGCGGGAGTTCAGTCTGCTTTCGGTACAATGCGCTTGATCGTAACGGTC LITVPLQMVEFYFILAAVTVVSSGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACTGTTCCGCTCCAAATGGTTGAATTCTACTTTATCCTTGCTGCA---------GTC---ACCGTAGTAAGCTCT---GGGGTC------------------------------------TTCTGGCGT---TTGATGATTGGCTCACTAGTGATGTTGGTTGCAGGCTATATGGGAGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTTATTGTTGGCATGTTAGGTTGGGGTTACATCCTTTATGAAATC---------------TTC------GCC---GGTGAAGCGGGTCGGGTTTCCTCCGAG------TCA---GCCCCAGCGGGAGTT---CAG---TCT---GCT---TTC---GGT---ACAATG---CGCTTGATCGTAACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSS-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927536 [IV-Proteo4-c] PRGD_OTU011_7d9071afe7e3180e78903ec2a523aa96 gb|KJ927536| PRGD_OTU011_7d9071afe7e3180e78903ec2a523aa96, putative proteorhodopsin gene, partial cds. PRGD_OTU011_7d9071afe7e3180e78903ec2a523aa96, putative proteorhodopsin gene, partial cds. KJ927536 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683) CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCGGTAACCGTCGTAAGTGCTGGAGTATTCTGGCGCTTGATGATTGGCTCACTGGTGATGCTGGTTGCAGGCTACATGGGAGAAGCAGGATTGGCTCCAGCATGGCCAGCATTTATTGTCGGCATGCTAGGTTGGGGTTACATCCTTTATGAAATCTTCGCCGGAGAAGCGGGTCGGGTTTCCTCTGAGTCAGCCCCAGCGGGAGTTCAATCTGCGTTCGGTACAATGCGCTTGATCGTAACTGTA LITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSSESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACTGTTCCGCTTCAAATGGTTGAATTCTACTTCATTCTTGCTGCG---------GTA---ACCGTCGTAAGTGCT---GGAGTA------------------------------------TTCTGGCGC---TTGATGATTGGCTCACTGGTGATGCTGGTTGCAGGCTACATGGGAGAA---------GCA------------------GGA------TTG---------------------------------GCT------------------------------------------------------------------CCAGCA------------------TGGCCAGCA---TTTATTGTCGGCATGCTAGGTTGGGGTTACATCCTTTATGAAATC---------------TTC------GCC---GGAGAAGCGGGTCGGGTTTCCTCTGAG------TCA---GCCCCAGCGGGAGTT---CAA---TCT---GCG---TTC---GGT---ACAATG---CGCTTGATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSSE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927558 [IV-Proteo4-c] PRGD_OTU011_ec514e341b52f15c4f64b3dd7947e473 gb|KJ927558| PRGD_OTU011_ec514e341b52f15c4f64b3dd7947e473, putative proteorhodopsin gene, partial cds. PRGD_OTU011_ec514e341b52f15c4f64b3dd7947e473, putative proteorhodopsin gene, partial cds. KJ927558 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTGATAACTGTTCCACTGCAAATGGTGGAGTTCTACTTCATTCTTGCAGCTGTAACTGTTGTAAGCTCTGGCGTCTTCTGGCGTTTGATGATTGGCTCTCTAGTAATGCTAGTAGCAGGCTACATGGGTGAAGCAGGCCTTGCCCCTGCATGGCCAGCATTCATCGTAGGCATGTTAGGATGGGGTTACATCTTGTACGAAATTTTTGCTGGTGAAGCCGGCAGAGTTTCCGCCGAGTCAGCCCCAGCTGGAGTTCAGTCAGCCTTTGGGACAATGCGCCTTATCGTCACCGTT LITVPLQMVEFYFILAAVTVVSSGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSAESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACTGTTCCACTGCAAATGGTGGAGTTCTACTTCATTCTTGCAGCT---------GTA---ACTGTTGTAAGCTCT---GGCGTC------------------------------------TTCTGGCGT---TTGATGATTGGCTCTCTAGTAATGCTAGTAGCAGGCTACATGGGTGAA---------GCA------------------GGC------CTT---------------------------------GCC------------------------------------------------------------------CCTGCA------------------TGGCCAGCA---TTCATCGTAGGCATGTTAGGATGGGGTTACATCTTGTACGAAATT---------------TTT------GCT---GGTGAAGCCGGCAGAGTTTCCGCCGAG------TCA---GCCCCAGCTGGAGTT---CAG---TCA---GCC---TTT---GGG---ACAATG---CGCCTTATCGTCACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSS-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSAE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927557 [IV-Proteo4-c] PRGD_OTU011_e4736bf348e2e317e1c88a4dbb2cd20c gb|KJ927557| PRGD_OTU011_e4736bf348e2e317e1c88a4dbb2cd20c, putative proteorhodopsin gene, partial cds. PRGD_OTU011_e4736bf348e2e317e1c88a4dbb2cd20c, putative proteorhodopsin gene, partial cds. KJ927557 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATAACTGTTCCACTACAAATGGTGGAGTTCTACTTCATTCTTGCTGCTGTCACAGTCGTCAGCTCAGGCGTCTTCTGGCGTTTGATGATTGGCTCTCTGGTGATGCTAGTAGCAGGCTATATGGGTGAAGCAGGCCTTGCCCCTGCATGGCCAGCATTCATCGTGGGCATGCTAGGATGGGGTTACATCCTGTACGAAATTTTTGCTGGTGAAGCCGGCAGAGTTTCCGCCGAGTCAGCCCCAGCTGGAGTTCAATCAGCCTTTGGGACAATGCGCCTTATCGTCACCGTA LITVPLQMVEFYFILAAVTVVSSGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSAESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACTGTTCCACTACAAATGGTGGAGTTCTACTTCATTCTTGCTGCT---------GTC---ACAGTCGTCAGCTCA---GGCGTC------------------------------------TTCTGGCGT---TTGATGATTGGCTCTCTGGTGATGCTAGTAGCAGGCTATATGGGTGAA---------GCA------------------GGC------CTT---------------------------------GCC------------------------------------------------------------------CCTGCA------------------TGGCCAGCA---TTCATCGTGGGCATGCTAGGATGGGGTTACATCCTGTACGAAATT---------------TTT------GCT---GGTGAAGCCGGCAGAGTTTCCGCCGAG------TCA---GCCCCAGCTGGAGTT---CAA---TCA---GCC---TTT---GGG---ACAATG---CGCCTTATCGTCACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSS-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSAE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927529 [IV-Proteo4-c] PRGD_OTU011_5902df89cea76f837d7120a3bfff6ce3 gb|KJ927529| PRGD_OTU011_5902df89cea76f837d7120a3bfff6ce3, putative proteorhodopsin gene, partial cds. PRGD_OTU011_5902df89cea76f837d7120a3bfff6ce3, putative proteorhodopsin gene, partial cds. KJ927529 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTGATAACTGTTCCACTACAAATGGTGGAGTTCTACTTCATTCTTGCTGCTGTCACAGTCGTCAGCTCAGGCGTCTTCTGGCGTTTGATGATTGGCTCTCTGGTAATGCTAGTAGCAGGCTACATGGGTGAAGCAGGTCTTGCCCCTGCATGGCCAGCATTCATCGTGGGCATGTTAGGATGGGGTTACATCCTGTACGAAATTTTTGCTGGTGAAGCCGGCAGAGTTTCCGCCGAGTCAGCCCCAGCTGGAGTTCAGTCAGCCTTTGGGACAATGCGCCTTATCGTCACCGTA LITVPLQMVEFYFILAAVTVVSSGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSAESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACTGTTCCACTACAAATGGTGGAGTTCTACTTCATTCTTGCTGCT---------GTC---ACAGTCGTCAGCTCA---GGCGTC------------------------------------TTCTGGCGT---TTGATGATTGGCTCTCTGGTAATGCTAGTAGCAGGCTACATGGGTGAA---------GCA------------------GGT------CTT---------------------------------GCC------------------------------------------------------------------CCTGCA------------------TGGCCAGCA---TTCATCGTGGGCATGTTAGGATGGGGTTACATCCTGTACGAAATT---------------TTT------GCT---GGTGAAGCCGGCAGAGTTTCCGCCGAG------TCA---GCCCCAGCTGGAGTT---CAG---TCA---GCC---TTT---GGG---ACAATG---CGCCTTATCGTCACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSS-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSAE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927513 [IV-Proteo4-c] PRGD_OTU011_205f5f2078dbbcd753b84ca293b6ebbb gb|KJ927513| PRGD_OTU011_205f5f2078dbbcd753b84ca293b6ebbb, putative proteorhodopsin gene, partial cds. PRGD_OTU011_205f5f2078dbbcd753b84ca293b6ebbb, putative proteorhodopsin gene, partial cds. KJ927513 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTAATAACTGTTCCACTACAAATGGTGGAGTTCTACTTCATTCTTGCTGCTGTCACAGTCGTCAGCTCAGGCGTCTTCTGGCGTTTGATGATTGGCTCTCTGGTAATGCTAGTAGCAGGCTACATGGGTGAAGCAGGCCTTGCCCCTGCATGGCCAGCATTCATCGTGGGCATGTTAGGATGGGGTTACATTCTATATGAAATTTTTGCTGGTGAAGCCGGTAGAGTTTCCGCAGAGTCAGCTCCAGCAGGTGTTCAGTCAGCCTTTGGGACAATGCGCCTTATCGTCACCGTA LITVPLQMVEFYFILAAVTVVSSGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSAESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATAACTGTTCCACTACAAATGGTGGAGTTCTACTTCATTCTTGCTGCT---------GTC---ACAGTCGTCAGCTCA---GGCGTC------------------------------------TTCTGGCGT---TTGATGATTGGCTCTCTGGTAATGCTAGTAGCAGGCTACATGGGTGAA---------GCA------------------GGC------CTT---------------------------------GCC------------------------------------------------------------------CCTGCA------------------TGGCCAGCA---TTCATCGTGGGCATGTTAGGATGGGGTTACATTCTATATGAAATT---------------TTT------GCT---GGTGAAGCCGGTAGAGTTTCCGCAGAG------TCA---GCTCCAGCAGGTGTT---CAG---TCA---GCC---TTT---GGG---ACAATG---CGCCTTATCGTCACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSS-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSAE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927539 [IV-Proteo4-c] PRGD_OTU011_8378e2d2d841ab9a916adff84bf38799 gb|KJ927539| PRGD_OTU011_8378e2d2d841ab9a916adff84bf38799, putative proteorhodopsin gene, partial cds. PRGD_OTU011_8378e2d2d841ab9a916adff84bf38799, putative proteorhodopsin gene, partial cds. KJ927539 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATCACTGTTCCTCTTCAAATGGTCGAGTTCTACTTCATTCTTGCTGCTGTCACTGTTGTAAGTTCGGGCGTCTTCTGGCGTTTGATGATTGGTTCTCTCGTGATGCTTGTAGCAGGCTACATGGGTGAAGCGGGCCTTGCTCCTGCATGGCCAGCATTCATAGTGGGCATGCTAGGATGGGGCTACATCCTTTACGAAATCTTTGCTGGTGAAGCCGGCAGAGTTTCGGCCGAGTCAGCTCCAGCTGGGGTTCAGTCAGCCTTTGGGACAATGCGCTTGATCGTCACTGTA LITVPLQMVEFYFILAAVTVVSSGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSAESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTTCCTCTTCAAATGGTCGAGTTCTACTTCATTCTTGCTGCT---------GTC---ACTGTTGTAAGTTCG---GGCGTC------------------------------------TTCTGGCGT---TTGATGATTGGTTCTCTCGTGATGCTTGTAGCAGGCTACATGGGTGAA---------GCG------------------GGC------CTT---------------------------------GCT------------------------------------------------------------------CCTGCA------------------TGGCCAGCA---TTCATAGTGGGCATGCTAGGATGGGGCTACATCCTTTACGAAATC---------------TTT------GCT---GGTGAAGCCGGCAGAGTTTCGGCCGAG------TCA---GCTCCAGCTGGGGTT---CAG---TCA---GCC---TTT---GGG---ACAATG---CGCTTGATCGTCACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSS-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSAE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927556 [IV-Proteo4-c] PRGD_OTU011_d9eea7e0fd8d124d0424d3edb9882d46 gb|KJ927556| PRGD_OTU011_d9eea7e0fd8d124d0424d3edb9882d46, putative proteorhodopsin gene, partial cds. PRGD_OTU011_d9eea7e0fd8d124d0424d3edb9882d46, putative proteorhodopsin gene, partial cds. KJ927556 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTGATAACTGTTCCGCTTCAAATGGTCGAGTTCTACTTCATTCTTGCGGCTGTCACAGTCGTCAGCTCAGGCGTTTTCTGGCGTTTGATGATTGGTTCTCTGGTGATGCTTGTAGCAGGCTACATGGGCGAAGCAGGTTTGGCTCCTGCATGGCCAGCATTCATCGTGGGCATGTTAGGATGGGGTTACATTCTATATGAAATTTTTGCCGGTGAAGCTGGCAGAGTTTCCGCAGAGTCAGCTCCAGCAGGGGTTCAGTCAGCCTTTGGCACTATGCGTTTGATCGTTACCGTC LITVPLQMVEFYFILAAVTVVSSGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSAESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACTGTTCCGCTTCAAATGGTCGAGTTCTACTTCATTCTTGCGGCT---------GTC---ACAGTCGTCAGCTCA---GGCGTT------------------------------------TTCTGGCGT---TTGATGATTGGTTCTCTGGTGATGCTTGTAGCAGGCTACATGGGCGAA---------GCA------------------GGT------TTG---------------------------------GCT------------------------------------------------------------------CCTGCA------------------TGGCCAGCA---TTCATCGTGGGCATGTTAGGATGGGGTTACATTCTATATGAAATT---------------TTT------GCC---GGTGAAGCTGGCAGAGTTTCCGCAGAG------TCA---GCTCCAGCAGGGGTT---CAG---TCA---GCC---TTT---GGC---ACTATG---CGTTTGATCGTTACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSS-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSAE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927552 [IV-Proteo4-c] PRGD_OTU011_bdaa89d89f7e26629205ac5d747f937c gb|KJ927552| PRGD_OTU011_bdaa89d89f7e26629205ac5d747f937c, putative proteorhodopsin gene, partial cds. PRGD_OTU011_bdaa89d89f7e26629205ac5d747f937c, putative proteorhodopsin gene, partial cds. KJ927552 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-33.28, 45.35) CTGATAACCGTTCCACTTCAAATGGTTGAATTCTACTTCATTCTTGCGGCTGTAACCGTCGTGAGCTCAGGCGTCTTCTGGCGGTTGATGATTGGCTCTCTAGTGATGCTAGTAGCAGGCTACATGGGAGAGGCAGGCCTGGCTCCTGCATGGCCAGCGTTCATCGTAGGCATGCTGGGATGGGGTTACATCCTATATGAAATTTTTGCTGGTGAAGCTGGCAGAGTTTCAGCCGAGTCAGCTCCAGCAGGAGTTCAGTCAGCTTTTGGGACAATGCGCTTGATCGTAACCGTG LITVPLQMVEFYFILAAVTVVSSGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSAESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTTCCACTTCAAATGGTTGAATTCTACTTCATTCTTGCGGCT---------GTA---ACCGTCGTGAGCTCA---GGCGTC------------------------------------TTCTGGCGG---TTGATGATTGGCTCTCTAGTGATGCTAGTAGCAGGCTACATGGGAGAG---------GCA------------------GGC------CTG---------------------------------GCT------------------------------------------------------------------CCTGCA------------------TGGCCAGCG---TTCATCGTAGGCATGCTGGGATGGGGTTACATCCTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGCAGAGTTTCAGCCGAG------TCA---GCTCCAGCAGGAGTT---CAG---TCA---GCT---TTT---GGG---ACAATG---CGCTTGATCGTAACCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSS-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSAE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927515 [IV-Proteo4-c] PRGD_OTU011_27cb80d09b8781616e5247638ba15304 gb|KJ927515| PRGD_OTU011_27cb80d09b8781616e5247638ba15304, putative proteorhodopsin gene, partial cds. PRGD_OTU011_27cb80d09b8781616e5247638ba15304, putative proteorhodopsin gene, partial cds. KJ927515 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTTATAACTGTTCCACTACAGATGGTTGAATTCTATTTCATCCTCGCGGCAGTCACCGTTGTTAGTGCGGGTGTATTCTGGCGTTTGATGATTGGCTCTCTAGTGATGCTAGTAGCAGGATACATGGGTGAAGCAGGCTTGGCTCCTGCATGGCCAGCCTTTATCGTGGGCATGCTTGGGTGGGGTTACATCCTATACGAAATCTTTGCCGGTGAAGCTGGCAGAGTTTCCGCCGAATCAGCTCCAGCAGGCGTCCAGTCAGCCTTTGGGACAATGCGCTTGATTGTCACTGTA LITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSAESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATAACTGTTCCACTACAGATGGTTGAATTCTATTTCATCCTCGCGGCA---------GTC---ACCGTTGTTAGTGCG---GGTGTA------------------------------------TTCTGGCGT---TTGATGATTGGCTCTCTAGTGATGCTAGTAGCAGGATACATGGGTGAA---------GCA------------------GGC------TTG---------------------------------GCT------------------------------------------------------------------CCTGCA------------------TGGCCAGCC---TTTATCGTGGGCATGCTTGGGTGGGGTTACATCCTATACGAAATC---------------TTT------GCC---GGTGAAGCTGGCAGAGTTTCCGCCGAA------TCA---GCTCCAGCAGGCGTC---CAG---TCA---GCC---TTT---GGG---ACAATG---CGCTTGATTGTCACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSAE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927508 [IV-Proteo4-c] PRGD_OTU011_103278a80571b9fc60ab3fe27a8b29a7 gb|KJ927508| PRGD_OTU011_103278a80571b9fc60ab3fe27a8b29a7, putative proteorhodopsin gene, partial cds. PRGD_OTU011_103278a80571b9fc60ab3fe27a8b29a7, putative proteorhodopsin gene, partial cds. KJ927508 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATAACTGTTCCACTGCAAATGGTGGAGTTCTACTTCATTCTTGCAGCTGTCACTGTTGTAAGCTCGGGCGTCTTTTGGCGTTTGATGATCGGCTCTCTGGTGATGCTGGTGGCGGGTTACATGGGTGAAGCTGGTCTGGCTCCTGCATGGCCAGCGTTTATCGTGGGCCTGCTAGGGTGGGGTTACATCCTTTACGAAATCTTTGCCGGTGAAGCTGGTAGAGTTTCGGCCGAGTCAGCTCCAGCTGGGGTTCAGTCAGCCTTTGGCACTATGCGCTTGATCGTCACTGTA LITVPLQMVEFYFILAAVTVVSSGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGLLGWGYILYEIFAGEAGRVSAESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACTGTTCCACTGCAAATGGTGGAGTTCTACTTCATTCTTGCAGCT---------GTC---ACTGTTGTAAGCTCG---GGCGTC------------------------------------TTTTGGCGT---TTGATGATCGGCTCTCTGGTGATGCTGGTGGCGGGTTACATGGGTGAA---------GCT------------------GGT------CTG---------------------------------GCT------------------------------------------------------------------CCTGCA------------------TGGCCAGCG---TTTATCGTGGGCCTGCTAGGGTGGGGTTACATCCTTTACGAAATC---------------TTT------GCC---GGTGAAGCTGGTAGAGTTTCGGCCGAG------TCA---GCTCCAGCTGGGGTT---CAG---TCA---GCC---TTT---GGC---ACTATG---CGCTTGATCGTCACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSS-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGLLGWGYILYEI-----F--A-GEAGRVSAE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927554 [IV-Proteo4-c] PRGD_OTU011_d879c49752f3dd016125259c10749524 gb|KJ927554| PRGD_OTU011_d879c49752f3dd016125259c10749524, putative proteorhodopsin gene, partial cds. PRGD_OTU011_d879c49752f3dd016125259c10749524, putative proteorhodopsin gene, partial cds. KJ927554 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-23.5956, 69.0419) TTGATAACTGTTCCGCTCCAGATGGTCGAATTCTACTTCATTCTTGCAGCGGTCACCGTTGTAAGCTCGGGCGTCTTCTGGCGTTTGATGATTGGCTCTCTAGTAATGCTAGTAGCGGGCTACATGGGTGAAGCAGGGTTGGCTCCTGCATGGCCAGCGTTTATCGTAGGCATGCTAGGATGGGGTTACATCCTTTACGAAATCTTTGCCGGTGAAGCCGGTAGAGTTTCTGCCGAATCAGCTCCAGCTGGGGTCCAGTCAGCCTTCGGAACAATGCGTTTGATCGTCACCGTA LITVPLQMVEFYFILAAVTVVSSGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGRVSAESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACTGTTCCGCTCCAGATGGTCGAATTCTACTTCATTCTTGCAGCG---------GTC---ACCGTTGTAAGCTCG---GGCGTC------------------------------------TTCTGGCGT---TTGATGATTGGCTCTCTAGTAATGCTAGTAGCGGGCTACATGGGTGAA---------GCA------------------GGG------TTG---------------------------------GCT------------------------------------------------------------------CCTGCA------------------TGGCCAGCG---TTTATCGTAGGCATGCTAGGATGGGGTTACATCCTTTACGAAATC---------------TTT------GCC---GGTGAAGCCGGTAGAGTTTCTGCCGAA------TCA---GCTCCAGCTGGGGTC---CAG---TCA---GCC---TTC---GGA---ACAATG---CGTTTGATCGTCACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSS-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGRVSAE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927524 [IV-Proteo4-c] PRGD_OTU011_391c53f65b1e16f29f1427cfd626cb98 gb|KJ927524| PRGD_OTU011_391c53f65b1e16f29f1427cfd626cb98, putative proteorhodopsin gene, partial cds. PRGD_OTU011_391c53f65b1e16f29f1427cfd626cb98, putative proteorhodopsin gene, partial cds. KJ927524 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTAATAACTGTGCCGCTTCAGATGGTTGAATTCTACTTTATCCTCGCTGCCGTCACCGTTGTCAGCGCAGGCGTCTTCTGGCGTTTGATGATTGGCTCTTTGGTGATGTTGGTAGCTGGCTACATGGGTGAAGCAGGTTTAGCTCCTGCATGGCCTGCTTTCATTGTAGGTATGCTAGGATGGGGTTATATTCTCTATGAGATTTTTGCTGGTGAAGCTGGTAAAGTTTCGGCCGAATCAGCCCCAGAAGGGGTTCAGTCAGCCTTTGGAACGATGCGTTTGATTGTTACTGTA LITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGKVSAESAPEGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACTGTGCCGCTTCAGATGGTTGAATTCTACTTTATCCTCGCTGCC---------GTC---ACCGTTGTCAGCGCA---GGCGTC------------------------------------TTCTGGCGT---TTGATGATTGGCTCTTTGGTGATGTTGGTAGCTGGCTACATGGGTGAA---------GCA------------------GGT------TTA---------------------------------GCT------------------------------------------------------------------CCTGCA------------------TGGCCTGCT---TTCATTGTAGGTATGCTAGGATGGGGTTATATTCTCTATGAGATT---------------TTT------GCT---GGTGAAGCTGGTAAAGTTTCGGCCGAA------TCA---GCCCCAGAAGGGGTT---CAG---TCA---GCC---TTT---GGA---ACGATG---CGTTTGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGKVSAE--S-APEGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927546 [IV-Proteo4-c] PRGD_OTU011_9f9a5bc85900effc5de74358de31cc56 gb|KJ927546| PRGD_OTU011_9f9a5bc85900effc5de74358de31cc56, putative proteorhodopsin gene, partial cds. PRGD_OTU011_9f9a5bc85900effc5de74358de31cc56, putative proteorhodopsin gene, partial cds. KJ927546 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTAATAACTGTGCCACTTCAGATGGTTGAATTCTACTTTATCCTCGCTGCTGTGACCGTTGTCAGCGCAGGCGTCTTCTGGCGTTTGATGATTGGCTCCTTGGTAATGTTGGTAGCCGGCTATATGGGTGAAGCAGGTTTAGCTCCTGCATGGCCTGCATTCATTGTAGGTATGCTAGGATGGGGTTATATTCTCTATGAGATTTTTGCTGGTGAAGCTGGCAAGGTTTCGGCCGAGTCAGCCCCAGAAGGGGTTCAGTCAGCCTTTGGAACGATGCGTTTGATTGTTACTGTA LITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGKVSAESAPEGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACTGTGCCACTTCAGATGGTTGAATTCTACTTTATCCTCGCTGCT---------GTG---ACCGTTGTCAGCGCA---GGCGTC------------------------------------TTCTGGCGT---TTGATGATTGGCTCCTTGGTAATGTTGGTAGCCGGCTATATGGGTGAA---------GCA------------------GGT------TTA---------------------------------GCT------------------------------------------------------------------CCTGCA------------------TGGCCTGCA---TTCATTGTAGGTATGCTAGGATGGGGTTATATTCTCTATGAGATT---------------TTT------GCT---GGTGAAGCTGGCAAGGTTTCGGCCGAG------TCA---GCCCCAGAAGGGGTT---CAG---TCA---GCC---TTT---GGA---ACGATG---CGTTTGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGKVSAE--S-APEGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927510 [IV-Proteo4-c] PRGD_OTU011_191139bb1b28c427bea87c553a0b9205 gb|KJ927510| PRGD_OTU011_191139bb1b28c427bea87c553a0b9205, putative proteorhodopsin gene, partial cds. PRGD_OTU011_191139bb1b28c427bea87c553a0b9205, putative proteorhodopsin gene, partial cds. KJ927510 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTAATAACTGTGCCACTTCAGATGGTTGAATTCTACTTTATCCTCGCTGCTGTGACCGTTGTCAGCGCAGGCGTCTTCTGGCGCTTGATGATTGGCTCCTTGGTGATGTTGGTAGCTGGCTACATGGGTGAAGCAGGTTTAGCTCCTGCATGGCCTGCATTTATTGTAGGTATGCTAGGATGGGGTTACATTCTCTATGAGATTTTTGCTGGTGAAGCTGGCAAAGTTTCGGCCGAGTCAGCCCCAGAAGGGGTTCAGTCAGCCTTTGGAACGATGCGTTTGATTGTTACTGTA LITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYMGEAGLAPAWPAFIVGMLGWGYILYEIFAGEAGKVSAESAPEGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACTGTGCCACTTCAGATGGTTGAATTCTACTTTATCCTCGCTGCT---------GTG---ACCGTTGTCAGCGCA---GGCGTC------------------------------------TTCTGGCGC---TTGATGATTGGCTCCTTGGTGATGTTGGTAGCTGGCTACATGGGTGAA---------GCA------------------GGT------TTA---------------------------------GCT------------------------------------------------------------------CCTGCA------------------TGGCCTGCA---TTTATTGTAGGTATGCTAGGATGGGGTTACATTCTCTATGAGATT---------------TTT------GCT---GGTGAAGCTGGCAAAGTTTCGGCCGAG------TCA---GCCCCAGAAGGGGTT---CAG---TCA---GCC---TTT---GGA---ACGATG---CGTTTGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGMLGWGYILYEI-----F--A-GEAGKVSAE--S-APEGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927535 [IV-Proteo4-c] PRGD_OTU011_76fa8679de33710cdbaab738bb3a5b7b gb|KJ927535| PRGD_OTU011_76fa8679de33710cdbaab738bb3a5b7b, putative proteorhodopsin gene, partial cds. PRGD_OTU011_76fa8679de33710cdbaab738bb3a5b7b, putative proteorhodopsin gene, partial cds. KJ927535 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATAACTGTGCCTCTACAAATGGTTGAATTTTACTTCATTCTTGCTGCTGTAACAGTCGTGAGTTCAGGCATCTTCTGGCGCTTGTTAATTGGATCGCTTGTTATGTTAGTTGCTGGATACATGGGTGAAGCTGGATTAGCTCCCGCGTGGCCAGCTTTTATCGTCGGCCTACTAGGATGGGGTTACATTTTATATGAGATCTTCGCTGGCGAGGCTGGCAAAGTTTCTGCTGAATCAGCCCCAGCCGGAGTTCAATCAGCGTTTGGAACTATGCGTTTGATTGTAACTGTT LITVPLQMVEFYFILAAVTVVSSGIFWRLLIGSLVMLVAGYMGEAGLAPAWPAFIVGLLGWGYILYEIFAGEAGKVSAESAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACTGTGCCTCTACAAATGGTTGAATTTTACTTCATTCTTGCTGCT---------GTA---ACAGTCGTGAGTTCA---GGCATC------------------------------------TTCTGGCGC---TTGTTAATTGGATCGCTTGTTATGTTAGTTGCTGGATACATGGGTGAA---------GCT------------------GGA------TTA---------------------------------GCT------------------------------------------------------------------CCCGCG------------------TGGCCAGCT---TTTATCGTCGGCCTACTAGGATGGGGTTACATTTTATATGAGATC---------------TTC------GCT---GGCGAGGCTGGCAAAGTTTCTGCTGAA------TCA---GCCCCAGCCGGAGTT---CAA---TCA---GCG---TTT---GGA---ACTATG---CGTTTGATTGTAACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSS-GI------------FWR-LLIGSLVMLVAGYMGE---A------G--L-----------A----------------------PA------WPA-FIVGLLGWGYILYEI-----F--A-GEAGKVSAE--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ926740 [IV-Proteo4-c] PRGD_OTU002c_37d221de35cf2bcda71df8dc8756ee35 gb|KJ926740| PRGD_OTU002c_37d221de35cf2bcda71df8dc8756ee35, putative proteorhodopsin gene, partial cds. PRGD_OTU002c_37d221de35cf2bcda71df8dc8756ee35, putative proteorhodopsin gene, partial cds. KJ926740 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTGATTACCGTACCGCTACAAATGGTTGAATTCTACTTCATCCTTGCAGCTGTAACTGCAGTGAGTGCCGGCATATTCTGGCGACTACTGCTTGGCTCTTTAGTGATGCTTGTAGCCGGCTACCTCGGCGAAGCTGGCATTGTAAAAGCATGGCCTGCGTTCATCGTCGGCATGGCTGGGTGGGGTTTCATACTCTACGAAATATTTGCTGGTGAAGCCGGTCGTGTCTCCGCAGAGAAAGCGCCTGCGTCAGTTCAATCTGCTTTCGGAACAATGCGTCTGATCGTGACTGTT LITVPLQMVEFYFILAAVTAVSAGIFWRLLLGSLVMLVAGYLGEAGIVKAWPAFIVGMAGWGFILYEIFAGEAGRVSAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACCGTACCGCTACAAATGGTTGAATTCTACTTCATCCTTGCAGCT---------GTA---ACTGCAGTGAGTGCC---GGCATA------------------------------------TTCTGGCGA---CTACTGCTTGGCTCTTTAGTGATGCTTGTAGCCGGCTACCTCGGCGAA---------GCT------------------GGC------ATT---------------------------------GTA------------------------------------------------------------------AAAGCA------------------TGGCCTGCG---TTCATCGTCGGCATGGCTGGGTGGGGTTTCATACTCTACGAAATA---------------TTT------GCT---GGTGAAGCCGGTCGTGTCTCCGCAGAG------AAA---GCGCCTGCGTCAGTT---CAA---TCT---GCT---TTC---GGA---ACAATG---CGTCTGATCGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLLGSLVMLVAGYLGE---A------G--I-----------V----------------------KA------WPA-FIVGMAGWGFILYEI-----F--A-GEAGRVSAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ927526 [IV-Proteo4-c] PRGD_OTU011_403c70828e1459758728a9afa1834716 gb|KJ927526| PRGD_OTU011_403c70828e1459758728a9afa1834716, putative proteorhodopsin gene, partial cds. PRGD_OTU011_403c70828e1459758728a9afa1834716, putative proteorhodopsin gene, partial cds. KJ927526 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (73.9992, 19.2097), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-33.28, 45.35) CTAATTACTGTGCCACTACAAATGGTTGAATTCTACTTCATTTTGGCGGCTGTAACCGTGGTCAGTGCTGGGGTCTTCTGGCGTTTAATGATCGGCTCATTGGTTATGCTTGTTGCCGGTTACTTAGGTGAAGCCGGCCTTGCACCAGCTTGGCCTGCATTCATCATCGGTATGGCTGGTTGGGGTTATATTCTTTATGAAATCTTTGCCGGTGAGGCTGGTCGGGTCTCTGCAGCGAGTGCTCCTGCAGGAGTTCAGTCTGCTTTTGGAACCATGCGGTTGATTGTAACTGTC LITVPLQMVEFYFILAAVTVVSAGVFWRLMIGSLVMLVAGYLGEAGLAPAWPAFIIGMAGWGYILYEIFAGEAGRVSAASAPAGVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTGCCACTACAAATGGTTGAATTCTACTTCATTTTGGCGGCT---------GTA---ACCGTGGTCAGTGCT---GGGGTC------------------------------------TTCTGGCGT---TTAATGATCGGCTCATTGGTTATGCTTGTTGCCGGTTACTTAGGTGAA---------GCC------------------GGC------CTT---------------------------------GCA------------------------------------------------------------------CCAGCT------------------TGGCCTGCA---TTCATCATCGGTATGGCTGGTTGGGGTTATATTCTTTATGAAATC---------------TTT------GCC---GGTGAGGCTGGTCGGGTCTCTGCAGCG------AGT---GCTCCTGCAGGAGTT---CAG---TCT---GCT---TTT---GGA---ACCATG---CGGTTGATTGTAACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TVVSA-GV------------FWR-LMIGSLVMLVAGYLGE---A------G--L-----------A----------------------PA------WPA-FIIGMAGWGYILYEI-----F--A-GEAGRVSAA--S-APAGV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ926750 [IV-Proteo4-c] PRGD_OTU002c_b7953c410030a5ea3808bcda3001d9b7 gb|KJ926750| PRGD_OTU002c_b7953c410030a5ea3808bcda3001d9b7, putative proteorhodopsin gene, partial cds. PRGD_OTU002c_b7953c410030a5ea3808bcda3001d9b7, putative proteorhodopsin gene, partial cds. KJ926750 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATAACAGTCCCACTTCAAATGGTTGAATTTTACTTCATTCTTGCTGCAGTAACAGCAGTGAGTGCAGGTATTTTCTGGCGCCTTATGATCGGTTCCTTGGTCATGTTGGTGGCAGGCTACATGGGTGAAGCGGGATTAATCAATGCGTGGGCTGGCTTCATAGTGGGCATGCTAGGATGGGCTTACATCCTGTATGAAATCTTTGCTGGTGAGGCAGGTCGTGTGTCTGCAGAAAAAGCTCCAGCTTCAGTGCAATCAGCTTTCGGTACTATGCGTTTGATCGTTACCATC LITVPLQMVEFYFILAAVTAVSAGIFWRLMIGSLVMLVAGYMGEAGLINAWAGFIVGMLGWAYILYEIFAGEAGRVSAEKAPASVQSAFGTMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACAGTCCCACTTCAAATGGTTGAATTTTACTTCATTCTTGCTGCA---------GTA---ACAGCAGTGAGTGCA---GGTATT------------------------------------TTCTGGCGC---CTTATGATCGGTTCCTTGGTCATGTTGGTGGCAGGCTACATGGGTGAA---------GCG------------------GGA------TTA---------------------------------ATC------------------------------------------------------------------AATGCG------------------TGGGCTGGC---TTCATAGTGGGCATGCTAGGATGGGCTTACATCCTGTATGAAATC---------------TTT------GCT---GGTGAGGCAGGTCGTGTGTCTGCAGAA------AAA---GCTCCAGCTTCAGTG---CAA---TCA---GCT---TTC---GGT---ACTATG---CGTTTGATCGTTACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LMIGSLVMLVAGYMGE---A------G--L-----------I----------------------NA------WAG-FIVGMLGWAYILYEI-----F--A-GEAGRVSAE--K-APASV-Q-S-A-F-G-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ926739 [IV-Proteo4-c] PRGD_OTU002c_2f02554303e8a4f4ce140635c5af0c42 gb|KJ926739| PRGD_OTU002c_2f02554303e8a4f4ce140635c5af0c42, putative proteorhodopsin gene, partial cds. PRGD_OTU002c_2f02554303e8a4f4ce140635c5af0c42, putative proteorhodopsin gene, partial cds. KJ926739 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAATTACAGTACCACTCCAAATGGTAGAATTCTACTTTATTCTAGCTGCTGTTACGGCCGTGAGTGCTGGCATATTCTGGCGCCTGCTGATCGGTTCTTTGGTGATGCTGGTTGCTGGATATATGGGCGAGGCAGACATGATCCACGAGTGGGCAGGTTTCATTGTAGGCTTGTTGGGATGGGCTTATATCCTATACGAAATCTTTGCAGGTGAAGCTAGTCGAGTTTCAGCTGAGAAAGCTCCAGCTTCTGTACAGTCGGCATTTGGAACGATGCGTTTGATTGTCACAGTT LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYMGEADMIHEWAGFIVGLLGWAYILYEIFAGEASRVSAEKAPASVQSAFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTACCACTCCAAATGGTAGAATTCTACTTTATTCTAGCTGCT---------GTT---ACGGCCGTGAGTGCT---GGCATA------------------------------------TTCTGGCGC---CTGCTGATCGGTTCTTTGGTGATGCTGGTTGCTGGATATATGGGCGAG---------GCA------------------GAC------ATG---------------------------------ATC------------------------------------------------------------------CACGAG------------------TGGGCAGGT---TTCATTGTAGGCTTGTTGGGATGGGCTTATATCCTATACGAAATC---------------TTT------GCA---GGTGAAGCTAGTCGAGTTTCAGCTGAG------AAA---GCTCCAGCTTCTGTA---CAG---TCG---GCA---TTT---GGA---ACGATG---CGTTTGATTGTCACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYMGE---A------D--M-----------I----------------------HE------WAG-FIVGLLGWAYILYEI-----F--A-GEASRVSAE--K-APASV-Q-S-A-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ926738 [IV-Proteo4-c] PRGD_OTU002c_161d06605f47efb1c6800b0f19fe8c82 gb|KJ926738| PRGD_OTU002c_161d06605f47efb1c6800b0f19fe8c82, putative proteorhodopsin gene, partial cds. PRGD_OTU002c_161d06605f47efb1c6800b0f19fe8c82, putative proteorhodopsin gene, partial cds. KJ926738 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATCACGGTTCCGCTTCAGATGGTTGAATTCTATTTCATCCTAGCAGCAGTTACCGCGGTAAGCGCGGGCATCTTCTGGCGCCTGCTAATCGGTTCACTCGTAATGTTGGTGGCTGGTTACATGGGTGAAGCAGGCCTGATTAATGCCTGGGCTGGTTTCATCGTCGGCATGTTGGGATGGGCGTACATCTTGTACGAAATCTTTGCGGGCGAAGCAGGCCGTGTGTCAGCGGAGAAGGCTCCGGCAGCGGTTCAGAGTGCGTTTGGGACGATGAGATTGATTGTGACCATC LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYMGEAGLINAWAGFIVGMLGWAYILYEIFAGEAGRVSAEKAPAAVQSAFGTMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACGGTTCCGCTTCAGATGGTTGAATTCTATTTCATCCTAGCAGCA---------GTT---ACCGCGGTAAGCGCG---GGCATC------------------------------------TTCTGGCGC---CTGCTAATCGGTTCACTCGTAATGTTGGTGGCTGGTTACATGGGTGAA---------GCA------------------GGC------CTG---------------------------------ATT------------------------------------------------------------------AATGCC------------------TGGGCTGGT---TTCATCGTCGGCATGTTGGGATGGGCGTACATCTTGTACGAAATC---------------TTT------GCG---GGCGAAGCAGGCCGTGTGTCAGCGGAG------AAG---GCTCCGGCAGCGGTT---CAG---AGT---GCG---TTT---GGG---ACGATG---AGATTGATTGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYMGE---A------G--L-----------I----------------------NA------WAG-FIVGMLGWAYILYEI-----F--A-GEAGRVSAE--K-APAAV-Q-S-A-F-G-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ926751 [IV-Proteo4-c] PRGD_OTU002c_ea3dce46c4b951df4d175f8ccacd2efa gb|KJ926751| PRGD_OTU002c_ea3dce46c4b951df4d175f8ccacd2efa, putative proteorhodopsin gene, partial cds. PRGD_OTU002c_ea3dce46c4b951df4d175f8ccacd2efa, putative proteorhodopsin gene, partial cds. KJ926751 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTAATCACGGTTCCGCTTCAGATGGTTGAATTCTATTTCATCCTAGCAGCAGTTACCGCGGTAAGCGCGGGCATCTTCTGGCGCCTGTTAATCGGTTCACTTGTAATGTTGGTGGCTGGTTACATGGGTGAAGCAGGCCTGATTAATGCCTGGGCTGGTTTCATCGTAGGCATGTTGGGATGGGCGTACATCTTGTACGAAATCTTTGCGGGTGAAGCAGGCCGTGTGTCAGCGGAAAAGGCTCCGGCAGCAGTTCAGAGTGCGTTTGGGACGATGAGATTGATTGTGACCATC LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYMGEAGLINAWAGFIVGMLGWAYILYEIFAGEAGRVSAEKAPAAVQSAFGTMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACGGTTCCGCTTCAGATGGTTGAATTCTATTTCATCCTAGCAGCA---------GTT---ACCGCGGTAAGCGCG---GGCATC------------------------------------TTCTGGCGC---CTGTTAATCGGTTCACTTGTAATGTTGGTGGCTGGTTACATGGGTGAA---------GCA------------------GGC------CTG---------------------------------ATT------------------------------------------------------------------AATGCC------------------TGGGCTGGT---TTCATCGTAGGCATGTTGGGATGGGCGTACATCTTGTACGAAATC---------------TTT------GCG---GGTGAAGCAGGCCGTGTGTCAGCGGAA------AAG---GCTCCGGCAGCAGTT---CAG---AGT---GCG---TTT---GGG---ACGATG---AGATTGATTGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYMGE---A------G--L-----------I----------------------NA------WAG-FIVGMLGWAYILYEI-----F--A-GEAGRVSAE--K-APAAV-Q-S-A-F-G-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ926744 [IV-Proteo4-c] PRGD_OTU002c_70432a64674a06fd74e5c13443805c60 gb|KJ926744| PRGD_OTU002c_70432a64674a06fd74e5c13443805c60, putative proteorhodopsin gene, partial cds. PRGD_OTU002c_70432a64674a06fd74e5c13443805c60, putative proteorhodopsin gene, partial cds. KJ926744 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) CTGATCACGGTTCCGCTTCAGATGGTTGAATTCTATTTCATCCTAGCAGCAGTTACCGCGGTAAGCGCCGGCATCTTCTGGCGCCTGTTAATTGGTTCACTTGTAATGTTAGTGGCTGGTTACATGGGTGAAGCAGGCCTGATAAATGCCTGGGCTGGTTTCATCGTCGGCATGTTGGGATGGGCGTACATCTTGTACGAAATCTTTGCAGGCGAAGCAGGCCGTGTGTCCGCGGAAAAGGCTCCGGCAGCAGTTCAGAGTGCGTTTGGGACGATGAGATTGATTGTGACCATC LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYMGEAGLINAWAGFIVGMLGWAYILYEIFAGEAGRVSAEKAPAAVQSAFGTMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACGGTTCCGCTTCAGATGGTTGAATTCTATTTCATCCTAGCAGCA---------GTT---ACCGCGGTAAGCGCC---GGCATC------------------------------------TTCTGGCGC---CTGTTAATTGGTTCACTTGTAATGTTAGTGGCTGGTTACATGGGTGAA---------GCA------------------GGC------CTG---------------------------------ATA------------------------------------------------------------------AATGCC------------------TGGGCTGGT---TTCATCGTCGGCATGTTGGGATGGGCGTACATCTTGTACGAAATC---------------TTT------GCA---GGCGAAGCAGGCCGTGTGTCCGCGGAA------AAG---GCTCCGGCAGCAGTT---CAG---AGT---GCG---TTT---GGG---ACGATG---AGATTGATTGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYMGE---A------G--L-----------I----------------------NA------WAG-FIVGMLGWAYILYEI-----F--A-GEAGRVSAE--K-APAAV-Q-S-A-F-G-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ926741 [IV-Proteo4-c] PRGD_OTU002c_4a1c38ab20b6e6bd41aba0a6e135917f gb|KJ926741| PRGD_OTU002c_4a1c38ab20b6e6bd41aba0a6e135917f, putative proteorhodopsin gene, partial cds. PRGD_OTU002c_4a1c38ab20b6e6bd41aba0a6e135917f, putative proteorhodopsin gene, partial cds. KJ926741 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTATCACTGTTCCGCTCCAGATGGTTGAGTTCTACTTCATCTTGGCAGCAGTAACCGCCGTAAGCGCGGGCATCTTCTGGCGCCTTTTGATTGGTTCACTGGTAATGTTAGTGGCCGGTTATATGGGTGAAGCGGGTCTTATCAACGCTTGGGCCGGTTTTATAGTCGGCATGTTGGGATGGGCATACATTTTGTACGAAATCTTCGCAGGCGAGGCGGGCCGTGTTTCCGCAGAAAAGGCTCCAGCAGCAGTTCAGAGTGCATTTGGCACGATGAGATTGATTGTAACTATC LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYMGEAGLINAWAGFIVGMLGWAYILYEIFAGEAGRVSAEKAPAAVQSAFGTMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATCACTGTTCCGCTCCAGATGGTTGAGTTCTACTTCATCTTGGCAGCA---------GTA---ACCGCCGTAAGCGCG---GGCATC------------------------------------TTCTGGCGC---CTTTTGATTGGTTCACTGGTAATGTTAGTGGCCGGTTATATGGGTGAA---------GCG------------------GGT------CTT---------------------------------ATC------------------------------------------------------------------AACGCT------------------TGGGCCGGT---TTTATAGTCGGCATGTTGGGATGGGCATACATTTTGTACGAAATC---------------TTC------GCA---GGCGAGGCGGGCCGTGTTTCCGCAGAA------AAG---GCTCCAGCAGCAGTT---CAG---AGT---GCA---TTT---GGC---ACGATG---AGATTGATTGTAACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYMGE---A------G--L-----------I----------------------NA------WAG-FIVGMLGWAYILYEI-----F--A-GEAGRVSAE--K-APAAV-Q-S-A-F-G-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ926746 [IV-Proteo4-c] PRGD_OTU002c_7c105e8ae7709f8f69d47686cb7a561e gb|KJ926746| PRGD_OTU002c_7c105e8ae7709f8f69d47686cb7a561e, putative proteorhodopsin gene, partial cds. PRGD_OTU002c_7c105e8ae7709f8f69d47686cb7a561e, putative proteorhodopsin gene, partial cds. KJ926746 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTATTACCGTTCCGCTTCAAATGGTCGAGTTCTACTTCATCCTCGCAGCAGTGACCGCCGTCAGCGCGGGTATCTTCTGGCGCCTGTTAATCGGCTCACTGGTAATGTTGGTGGCTGGTTACATGGGTGAAGCAGGTCTAATTAATGCCTGGGCTGGTTTCATCGTCGGAATGTTAGGATGGGCGTACATCTTGTACGAAATCTTCGCAGGCGAAGCAGGCCGAGTATCAGCAGAAAAGGCTCCAGCAGCAGTTCAGAGTGCATTCGGCACGATGAGACTGATTGTGACCATA LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYMGEAGLINAWAGFIVGMLGWAYILYEIFAGEAGRVSAEKAPAAVQSAFGTMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATTACCGTTCCGCTTCAAATGGTCGAGTTCTACTTCATCCTCGCAGCA---------GTG---ACCGCCGTCAGCGCG---GGTATC------------------------------------TTCTGGCGC---CTGTTAATCGGCTCACTGGTAATGTTGGTGGCTGGTTACATGGGTGAA---------GCA------------------GGT------CTA---------------------------------ATT------------------------------------------------------------------AATGCC------------------TGGGCTGGT---TTCATCGTCGGAATGTTAGGATGGGCGTACATCTTGTACGAAATC---------------TTC------GCA---GGCGAAGCAGGCCGAGTATCAGCAGAA------AAG---GCTCCAGCAGCAGTT---CAG---AGT---GCA---TTC---GGC---ACGATG---AGACTGATTGTGACCATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYMGE---A------G--L-----------I----------------------NA------WAG-FIVGMLGWAYILYEI-----F--A-GEAGRVSAE--K-APAAV-Q-S-A-F-G-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ926742 [IV-Proteo4-c] PRGD_OTU002c_4b3106135f2b91145985e9521020e130 gb|KJ926742| PRGD_OTU002c_4b3106135f2b91145985e9521020e130, putative proteorhodopsin gene, partial cds. PRGD_OTU002c_4b3106135f2b91145985e9521020e130, putative proteorhodopsin gene, partial cds. KJ926742 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTAATCACCGTTCCACTTCAGATGGTTGAATTCTATTTCATCCTGGCAGCAGTTACCGCCGTGAGCGCGGGTATCTTCTGGCGCCTGTTAATCGGCTCATTGGTAATGCTGGTGGCTGGTTACATGGGTGAAGCAGGCCTGATTAATGCTTGGGCTGGTTTCATCGTCGGCATGTTGGGATGGGCGTACATTTTGTACGAAATCTTTGCAGGCGAAGCAGGCCGTGTATCAGCGGAAAAGGCTCCGGCAGCGGTTCAGAGTGCGTTTGGTACGATGAGATTGATTGTGACCATA LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYMGEAGLINAWAGFIVGMLGWAYILYEIFAGEAGRVSAEKAPAAVQSAFGTMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACCGTTCCACTTCAGATGGTTGAATTCTATTTCATCCTGGCAGCA---------GTT---ACCGCCGTGAGCGCG---GGTATC------------------------------------TTCTGGCGC---CTGTTAATCGGCTCATTGGTAATGCTGGTGGCTGGTTACATGGGTGAA---------GCA------------------GGC------CTG---------------------------------ATT------------------------------------------------------------------AATGCT------------------TGGGCTGGT---TTCATCGTCGGCATGTTGGGATGGGCGTACATTTTGTACGAAATC---------------TTT------GCA---GGCGAAGCAGGCCGTGTATCAGCGGAA------AAG---GCTCCGGCAGCGGTT---CAG---AGT---GCG---TTT---GGT---ACGATG---AGATTGATTGTGACCATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYMGE---A------G--L-----------I----------------------NA------WAG-FIVGMLGWAYILYEI-----F--A-GEAGRVSAE--K-APAAV-Q-S-A-F-G-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ926745 [IV-Proteo4-c] PRGD_OTU002c_729003cdd62699335aeda6dcc830b150 gb|KJ926745| PRGD_OTU002c_729003cdd62699335aeda6dcc830b150, putative proteorhodopsin gene, partial cds. PRGD_OTU002c_729003cdd62699335aeda6dcc830b150, putative proteorhodopsin gene, partial cds. KJ926745 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTAATCACCGTTCCGCTGCAAATGGTTGAATTCTATTTCATCCTAGCTGCAGTGACCGCTGTCAGCGCGGGTATATTCTGGCGCCTGTTAATCGGCTCACTGGTAATGTTGGTGGCTGGCTACATGGGTGAAGCAGGCCTGATTAATGCCTGGGCTGGTTTCATCGTTGGCATGTTAGGATGGGCTTACATCTTGTACGAAATCTTTGCAGGTGAAGCGGGCCGTGTGTCAGCAGAAAAGGCTCCGGCAGCCGTTCAGAGTGCGTTTGGCACGATGAGGTTGATTGTAACCATA LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYMGEAGLINAWAGFIVGMLGWAYILYEIFAGEAGRVSAEKAPAAVQSAFGTMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACCGTTCCGCTGCAAATGGTTGAATTCTATTTCATCCTAGCTGCA---------GTG---ACCGCTGTCAGCGCG---GGTATA------------------------------------TTCTGGCGC---CTGTTAATCGGCTCACTGGTAATGTTGGTGGCTGGCTACATGGGTGAA---------GCA------------------GGC------CTG---------------------------------ATT------------------------------------------------------------------AATGCC------------------TGGGCTGGT---TTCATCGTTGGCATGTTAGGATGGGCTTACATCTTGTACGAAATC---------------TTT------GCA---GGTGAAGCGGGCCGTGTGTCAGCAGAA------AAG---GCTCCGGCAGCCGTT---CAG---AGT---GCG---TTT---GGC---ACGATG---AGGTTGATTGTAACCATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYMGE---A------G--L-----------I----------------------NA------WAG-FIVGMLGWAYILYEI-----F--A-GEAGRVSAE--K-APAAV-Q-S-A-F-G-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ926747 [IV-Proteo4-c] PRGD_OTU002c_7fbcbc97e7c4914362e565ce1835f1d9 gb|KJ926747| PRGD_OTU002c_7fbcbc97e7c4914362e565ce1835f1d9, putative proteorhodopsin gene, partial cds. PRGD_OTU002c_7fbcbc97e7c4914362e565ce1835f1d9, putative proteorhodopsin gene, partial cds. KJ926747 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTAATCACCGTTCCACTGCAAATGGTTGAATTCTATTTCATCCTAGCTGCAGTGACCGCCGTTAGCGCGGGCATCTTCTGGCGCCTCTTAATCGGCTCACTGGTAATGTTGGTGGCTGGCTACATGGGTGAAGCAGGCCTGATTAATGCCTGGGCTGGTTTCATCGTTGGCATGTTAGGATGGGCTTACATCTTGTACGAAATCTTTGCAGGTGAAGCGGGCCGGGTGTCAGCAGAAAAGGCTCCGGCAGCCGTTCAGAGTGCGTTTGGCACGATGAGGTTGATTGTGACCATA LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYMGEAGLINAWAGFIVGMLGWAYILYEIFAGEAGRVSAEKAPAAVQSAFGTMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACCGTTCCACTGCAAATGGTTGAATTCTATTTCATCCTAGCTGCA---------GTG---ACCGCCGTTAGCGCG---GGCATC------------------------------------TTCTGGCGC---CTCTTAATCGGCTCACTGGTAATGTTGGTGGCTGGCTACATGGGTGAA---------GCA------------------GGC------CTG---------------------------------ATT------------------------------------------------------------------AATGCC------------------TGGGCTGGT---TTCATCGTTGGCATGTTAGGATGGGCTTACATCTTGTACGAAATC---------------TTT------GCA---GGTGAAGCGGGCCGGGTGTCAGCAGAA------AAG---GCTCCGGCAGCCGTT---CAG---AGT---GCG---TTT---GGC---ACGATG---AGGTTGATTGTGACCATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYMGE---A------G--L-----------I----------------------NA------WAG-FIVGMLGWAYILYEI-----F--A-GEAGRVSAE--K-APAAV-Q-S-A-F-G-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ926748 [IV-Proteo4-c] PRGD_OTU002c_a3343ab90c9ad38301347419d55c535c gb|KJ926748| PRGD_OTU002c_a3343ab90c9ad38301347419d55c535c, putative proteorhodopsin gene, partial cds. PRGD_OTU002c_a3343ab90c9ad38301347419d55c535c, putative proteorhodopsin gene, partial cds. KJ926748 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTAATCACCGTCCCGCTGCAAATGGTTGAATTCTATTTCATCCTAGCTGCAGTGACCGCCGTTAGTGCGGGTATCTTCTGGCGCCTGTTAATCGGCTCACTGGTAATGTTGGTGGCTGGTTACATGGGTGAAGCAGGCCTAATTAATGCTTGGGCTGGTTTCATCGTTGGCATGTTAGGATGGGCTTACATCTTGTACGAAATCTTTGCAGGTGAAGCGGGCCGTGTGTCAGCAGAAAAGGCTCCGGCAGCCGTTCAGAGTGCGTTTGGCACGATGAGGCTGATTGTAACCATC LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYMGEAGLINAWAGFIVGMLGWAYILYEIFAGEAGRVSAEKAPAAVQSAFGTMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACCGTCCCGCTGCAAATGGTTGAATTCTATTTCATCCTAGCTGCA---------GTG---ACCGCCGTTAGTGCG---GGTATC------------------------------------TTCTGGCGC---CTGTTAATCGGCTCACTGGTAATGTTGGTGGCTGGTTACATGGGTGAA---------GCA------------------GGC------CTA---------------------------------ATT------------------------------------------------------------------AATGCT------------------TGGGCTGGT---TTCATCGTTGGCATGTTAGGATGGGCTTACATCTTGTACGAAATC---------------TTT------GCA---GGTGAAGCGGGCCGTGTGTCAGCAGAA------AAG---GCTCCGGCAGCCGTT---CAG---AGT---GCG---TTT---GGC---ACGATG---AGGCTGATTGTAACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYMGE---A------G--L-----------I----------------------NA------WAG-FIVGMLGWAYILYEI-----F--A-GEAGRVSAE--K-APAAV-Q-S-A-F-G-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ926752 [IV-Proteo4-c] PRGD_OTU002c_f89d279a7b9df82468a6a208baa4d575 gb|KJ926752| PRGD_OTU002c_f89d279a7b9df82468a6a208baa4d575, putative proteorhodopsin gene, partial cds. PRGD_OTU002c_f89d279a7b9df82468a6a208baa4d575, putative proteorhodopsin gene, partial cds. KJ926752 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATCACCGTTCCGCTTCAAATGGTTGAATTCTATTTCATCCTAGCTGCAGTGACCGCCGTTAGTGCGGGTATCTTCTGGCGCCTGTTAATTGGCTCACTGGTAATGTTGGTGGCTGGTTACATGGGCGAAGCAGGCCTGATTAATGCCTGGGCTGGTTTCATCGTTGGCATGTTAGGATGGGCGTACATCTTGTACGAAATCTTTGCAGGTGAAGCGGGCCGTGTGTCTGCCGAAAAGGCTCCGGCAGCGGTTCAGAGCGCGTTTGGCACGATGAGATTGATTGTGACGATA LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYMGEAGLINAWAGFIVGMLGWAYILYEIFAGEAGRVSAEKAPAAVQSAFGTMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACCGTTCCGCTTCAAATGGTTGAATTCTATTTCATCCTAGCTGCA---------GTG---ACCGCCGTTAGTGCG---GGTATC------------------------------------TTCTGGCGC---CTGTTAATTGGCTCACTGGTAATGTTGGTGGCTGGTTACATGGGCGAA---------GCA------------------GGC------CTG---------------------------------ATT------------------------------------------------------------------AATGCC------------------TGGGCTGGT---TTCATCGTTGGCATGTTAGGATGGGCGTACATCTTGTACGAAATC---------------TTT------GCA---GGTGAAGCGGGCCGTGTGTCTGCCGAA------AAG---GCTCCGGCAGCGGTT---CAG---AGC---GCG---TTT---GGC---ACGATG---AGATTGATTGTGACGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYMGE---A------G--L-----------I----------------------NA------WAG-FIVGMLGWAYILYEI-----F--A-GEAGRVSAE--K-APAAV-Q-S-A-F-G-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ926749 [IV-Proteo4-c] PRGD_OTU002c_abada474755bbad2d271bf075b061704 gb|KJ926749| PRGD_OTU002c_abada474755bbad2d271bf075b061704, putative proteorhodopsin gene, partial cds. PRGD_OTU002c_abada474755bbad2d271bf075b061704, putative proteorhodopsin gene, partial cds. KJ926749 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Indian Ocean (-14.48, 113.45) CTAATTACCGTTCCGCTGCAAATGGTTGAATTCTATTTCATCCTAGCTGCAGTTACCGCCGTCAGCGCGGGTATTTTCTGGCGCCTATTAATCGGCTCACTGGTAATGTTGGTGGCTGGTTACATGGGTGAAGCAGGCCTGATTAATGCCTGGGCTGGTTTCATCGTTGGAATGTTGGGATGGGCGTACATCTTGTACGAAATCTTTGCAGGTGAAGCGGGCCGTGTGTCAGCAGAGAAGGCTCCGGCAGCAGTTCAGAGTGCGTTTGGCACTATGAGATTGATTGTGACCATA LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYMGEAGLINAWAGFIVGMLGWAYILYEIFAGEAGRVSAEKAPAAVQSAFGTMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACCGTTCCGCTGCAAATGGTTGAATTCTATTTCATCCTAGCTGCA---------GTT---ACCGCCGTCAGCGCG---GGTATT------------------------------------TTCTGGCGC---CTATTAATCGGCTCACTGGTAATGTTGGTGGCTGGTTACATGGGTGAA---------GCA------------------GGC------CTG---------------------------------ATT------------------------------------------------------------------AATGCC------------------TGGGCTGGT---TTCATCGTTGGAATGTTGGGATGGGCGTACATCTTGTACGAAATC---------------TTT------GCA---GGTGAAGCGGGCCGTGTGTCAGCAGAG------AAG---GCTCCGGCAGCAGTT---CAG---AGT---GCG---TTT---GGC---ACTATG---AGATTGATTGTGACCATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYMGE---A------G--L-----------I----------------------NA------WAG-FIVGMLGWAYILYEI-----F--A-GEAGRVSAE--K-APAAV-Q-S-A-F-G-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ926743 [IV-Proteo4-c] PRGD_OTU002c_70032ed1a5e63879b14f9711ac7156a6 gb|KJ926743| PRGD_OTU002c_70032ed1a5e63879b14f9711ac7156a6, putative proteorhodopsin gene, partial cds. PRGD_OTU002c_70032ed1a5e63879b14f9711ac7156a6, putative proteorhodopsin gene, partial cds. KJ926743 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATCACCGTTCCGCTCCAGATGGTTGAATTCTATTTCATCCTAGCAGCAGTTACCGCCGTGAGCGCGGGTATCTTCTGGCGCCTGTTAATAGGCTCACTGGTAATGTTGGTGGCTGGTTACATGGGTGAAGCAGGCCTGATCAATGCCTGGGCTGGTTTCATCGTTGGCATGTTGGGATGGGCGTACATCTTGTACGAAATCTTTGCAGGTGAAGCAGGCCGCGTGTCAGCCGAAAAGGCTCCAGCAGCAGTTCAGAGTGCGTTTGGCACGATGAGATTGATTGTGACCATT LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYMGEAGLINAWAGFIVGMLGWAYILYEIFAGEAGRVSAEKAPAAVQSAFGTMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACCGTTCCGCTCCAGATGGTTGAATTCTATTTCATCCTAGCAGCA---------GTT---ACCGCCGTGAGCGCG---GGTATC------------------------------------TTCTGGCGC---CTGTTAATAGGCTCACTGGTAATGTTGGTGGCTGGTTACATGGGTGAA---------GCA------------------GGC------CTG---------------------------------ATC------------------------------------------------------------------AATGCC------------------TGGGCTGGT---TTCATCGTTGGCATGTTGGGATGGGCGTACATCTTGTACGAAATC---------------TTT------GCA---GGTGAAGCAGGCCGCGTGTCAGCCGAA------AAG---GCTCCAGCAGCAGTT---CAG---AGT---GCG---TTT---GGC---ACGATG---AGATTGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYMGE---A------G--L-----------I----------------------NA------WAG-FIVGMLGWAYILYEI-----F--A-GEAGRVSAE--K-APAAV-Q-S-A-F-G-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-c]_KJ926737 [IV-Proteo4-c] PRGD_OTU002c_otuREP_598913173bc0370962f71d16a74458c3 gb|KJ926737| PRGD_OTU002c_otuREP_598913173bc0370962f71d16a74458c3, putative proteorhodopsin gene, partial cds. PRGD_OTU002c_otuREP_598913173bc0370962f71d16a74458c3, putative proteorhodopsin gene, partial cds. KJ926737 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCATCACCGTTCCGCTTCAGATGGTTGAATTCTACTTCATCCTAGCAGCAGTTACCGCCGTCAGTGCGGGGATCTTCTGGCGCCTATTGATAGGATCACTGGTTATGCTGGTGGCCGGTTACATGGGTGAAGCAGGCCTGATTAATGCCTGGGCTGGTTTCATCGTTGGCATGTTGGGATGGGCGTACATCTTGTACGAAATCTTTGCTGGTGAAGCAGGCCGTGTGTCGGCTGAAAAGGCTCCGGCAGCAGTTCAGAGTGCTTTTGGCACAATGAGACTGATTGTGACCATA LITVPLQMVEFYFILAAVTAVSAGIFWRLLIGSLVMLVAGYMGEAGLINAWAGFIVGMLGWAYILYEIFAGEAGRVSAEKAPAAVQSAFGTMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACCGTTCCGCTTCAGATGGTTGAATTCTACTTCATCCTAGCAGCA---------GTT---ACCGCCGTCAGTGCG---GGGATC------------------------------------TTCTGGCGC---CTATTGATAGGATCACTGGTTATGCTGGTGGCCGGTTACATGGGTGAA---------GCA------------------GGC------CTG---------------------------------ATT------------------------------------------------------------------AATGCC------------------TGGGCTGGT---TTCATCGTTGGCATGTTGGGATGGGCGTACATCTTGTACGAAATC---------------TTT------GCT---GGTGAAGCAGGCCGTGTGTCGGCTGAA------AAG---GCTCCGGCAGCAGTT---CAG---AGT---GCT---TTT---GGC---ACAATG---AGACTGATTGTGACCATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYFILAA---V-TAVSA-GI------------FWR-LLIGSLVMLVAGYMGE---A------G--L-----------I----------------------NA------WAG-FIVGMLGWAYILYEI-----F--A-GEAGRVSAE--K-APAAV-Q-S-A-F-G-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4]_KJ929237 [IV-Proteo4] PRGD_OTU091_dfc11812c9a5b9fbb2bcb103190f394e gb|KJ929237| PRGD_OTU091_dfc11812c9a5b9fbb2bcb103190f394e, putative proteorhodopsin gene, partial cds. PRGD_OTU091_dfc11812c9a5b9fbb2bcb103190f394e, putative proteorhodopsin gene, partial cds. KJ929237 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATAATCACCGTTCCACTTCAAATGGTTGAATTTTATTTTATCCTAGCCGCAGTTGCCGTTGTAAGTGCTGGTATTTTTTGGCGGTTACTTATTGGGACCTTGGTTATGCTTTTAGCAGGCTACTTGGGTGAAACTGGAACTATTAATCCATGGATAGGGTTCATAGTTGGGATGGGTGGTTGGTTATACATCTTGTACGAAATTTTTGCTGGCGAGGCAGGAAGACTGTCGGCCGAAAAATCTTCTGAATCCGTGAAAACTGCCTTTAACACTATGAAGTGGATAGTAACTATC IITVPLQMVEFYFILAAVAVVSAGIFWRLLIGTLVMLLAGYLGETGTINPWIGFIVGMGGWLYILYEIFAGEAGRLSAEKSSESVKTAFNTMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATCACCGTTCCACTTCAAATGGTTGAATTTTATTTTATCCTAGCCGCA---------GTT---GCCGTTGTAAGTGCT---GGTATT------------------------------------TTTTGGCGG---TTACTTATTGGGACCTTGGTTATGCTTTTAGCAGGCTACTTGGGTGAA---------ACT------------------GGA------ACT---------------------------------ATT------------------------------------------------------------------AATCCA------------------TGGATAGGG---TTCATAGTTGGGATGGGTGGTTGGTTATACATCTTGTACGAAATT---------------TTT------GCT---GGCGAGGCAGGAAGACTGTCGGCCGAA------AAA---TCTTCTGAATCCGTG---AAA---ACT---GCC---TTT---AAC---ACTATG---AAGTGGATAGTAACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LLIGTLVMLLAGYLGE---T------G--T-----------I----------------------NP------WIG-FIVGMGGWLYILYEI-----F--A-GEAGRLSAE--K-SSESV-K-T-A-F-N-TM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4]_KJ929239 [IV-Proteo4] PRGD_OTU091_f9905c1924d5036ec0ec90ab2bb4ba6c gb|KJ929239| PRGD_OTU091_f9905c1924d5036ec0ec90ab2bb4ba6c, putative proteorhodopsin gene, partial cds. PRGD_OTU091_f9905c1924d5036ec0ec90ab2bb4ba6c, putative proteorhodopsin gene, partial cds. KJ929239 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683) ATAATCACCGTTCCACTTCAAATGGTTGAATTTTATTTTATCCTAGCCGCAGTTGCCGTTGTAAGTGCTGGTATTTTTTGGCGGTTACTTATCGGGACCTTGGTTATGCTTTTAGCAGGCTACTTGGGTGAAACTGGAACTATTAATCCATGGATAGGGTTCATAGTTGGGATGGGTGGCTGGTTATACATCTTGTACGAGATTTTTGCTGGCGAGGCAGGAAGACTGTCGGCCGAAAAATCTTCAGAATCCGTGAAAACTGCCTTTAACACTATGAAGTGGATAGTAACTATC IITVPLQMVEFYFILAAVAVVSAGIFWRLLIGTLVMLLAGYLGETGTINPWIGFIVGMGGWLYILYEIFAGEAGRLSAEKSSESVKTAFNTMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATCACCGTTCCACTTCAAATGGTTGAATTTTATTTTATCCTAGCCGCA---------GTT---GCCGTTGTAAGTGCT---GGTATT------------------------------------TTTTGGCGG---TTACTTATCGGGACCTTGGTTATGCTTTTAGCAGGCTACTTGGGTGAA---------ACT------------------GGA------ACT---------------------------------ATT------------------------------------------------------------------AATCCA------------------TGGATAGGG---TTCATAGTTGGGATGGGTGGCTGGTTATACATCTTGTACGAGATT---------------TTT------GCT---GGCGAGGCAGGAAGACTGTCGGCCGAA------AAA---TCTTCAGAATCCGTG---AAA---ACT---GCC---TTT---AAC---ACTATG---AAGTGGATAGTAACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LLIGTLVMLLAGYLGE---T------G--T-----------I----------------------NP------WIG-FIVGMGGWLYILYEI-----F--A-GEAGRLSAE--K-SSESV-K-T-A-F-N-TM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4]_KJ929236 [IV-Proteo4] PRGD_OTU091_ace9197d35e58b8a80f81b371ba5fae3 gb|KJ929236| PRGD_OTU091_ace9197d35e58b8a80f81b371ba5fae3, putative proteorhodopsin gene, partial cds. PRGD_OTU091_ace9197d35e58b8a80f81b371ba5fae3, putative proteorhodopsin gene, partial cds. KJ929236 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATAATCACCGTTCCACTTCAAATGGTTGAATTTTATTTTATCCTAGCCGCAGTTGCCGTTGTAAGTGCTGGTATTTTTTGGCGGTTACTTATCGGGACCTTGGTTATGCTTTTAGCAGGCTACTTGGGTGAAACTGGAACTATTAATCCATGGATAGGGTTCATAGTTGGGATGGGTGGTTGGTTATACATCTTGTACGAGATTTTTGCTGGCGAGGCAGGAAGACTGTCGGCCGAAAAATCTTCTGAATCCGTGAAAACTGCCTTTAATACTATGAAGTGGATAGTAACTATC IITVPLQMVEFYFILAAVAVVSAGIFWRLLIGTLVMLLAGYLGETGTINPWIGFIVGMGGWLYILYEIFAGEAGRLSAEKSSESVKTAFNTMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATCACCGTTCCACTTCAAATGGTTGAATTTTATTTTATCCTAGCCGCA---------GTT---GCCGTTGTAAGTGCT---GGTATT------------------------------------TTTTGGCGG---TTACTTATCGGGACCTTGGTTATGCTTTTAGCAGGCTACTTGGGTGAA---------ACT------------------GGA------ACT---------------------------------ATT------------------------------------------------------------------AATCCA------------------TGGATAGGG---TTCATAGTTGGGATGGGTGGTTGGTTATACATCTTGTACGAGATT---------------TTT------GCT---GGCGAGGCAGGAAGACTGTCGGCCGAA------AAA---TCTTCTGAATCCGTG---AAA---ACT---GCC---TTT---AAT---ACTATG---AAGTGGATAGTAACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LLIGTLVMLLAGYLGE---T------G--T-----------I----------------------NP------WIG-FIVGMGGWLYILYEI-----F--A-GEAGRLSAE--K-SSESV-K-T-A-F-N-TM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4]_KJ929238 [IV-Proteo4] PRGD_OTU091_f1c8b82ff76caeece7b570a3efd90d12 gb|KJ929238| PRGD_OTU091_f1c8b82ff76caeece7b570a3efd90d12, putative proteorhodopsin gene, partial cds. PRGD_OTU091_f1c8b82ff76caeece7b570a3efd90d12, putative proteorhodopsin gene, partial cds. KJ929238 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATAATCACCGTTCCACTTCAAATGGTTGAATTTTATTTTATCCTAGCCGCAGTTGCCGTTGTAAGTGCTGGTATTTTTTGGCGATTACTTATCGGGACCTTGGTTATGCTTTTAGCAGGCTACTTGGGTGAAACTGGAACTATTAATCCATGGATAGGGTTCATAGTTGGGATGGGTGGTTGGTTATACATCTTGTACGAGATTTTTGCCGGCGAGGCAGGAAAACTGTCGGCCGAAAAATCTTCTGAATCCGTGAAAACTGCCTTTAATACTATGAAGTGGATAGTAACTATC IITVPLQMVEFYFILAAVAVVSAGIFWRLLIGTLVMLLAGYLGETGTINPWIGFIVGMGGWLYILYEIFAGEAGKLSAEKSSESVKTAFNTMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATCACCGTTCCACTTCAAATGGTTGAATTTTATTTTATCCTAGCCGCA---------GTT---GCCGTTGTAAGTGCT---GGTATT------------------------------------TTTTGGCGA---TTACTTATCGGGACCTTGGTTATGCTTTTAGCAGGCTACTTGGGTGAA---------ACT------------------GGA------ACT---------------------------------ATT------------------------------------------------------------------AATCCA------------------TGGATAGGG---TTCATAGTTGGGATGGGTGGTTGGTTATACATCTTGTACGAGATT---------------TTT------GCC---GGCGAGGCAGGAAAACTGTCGGCCGAA------AAA---TCTTCTGAATCCGTG---AAA---ACT---GCC---TTT---AAT---ACTATG---AAGTGGATAGTAACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LLIGTLVMLLAGYLGE---T------G--T-----------I----------------------NP------WIG-FIVGMGGWLYILYEI-----F--A-GEAGKLSAE--K-SSESV-K-T-A-F-N-TM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4]_KJ929232 [IV-Proteo4] PRGD_OTU091_otuREP_623b2b191068f1a6e28cdc7fd9f6b02b gb|KJ929232| PRGD_OTU091_otuREP_623b2b191068f1a6e28cdc7fd9f6b02b, putative proteorhodopsin gene, partial cds. PRGD_OTU091_otuREP_623b2b191068f1a6e28cdc7fd9f6b02b, putative proteorhodopsin gene, partial cds. KJ929232 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) ATAATCACCGTTCCACTTCAAATGGTTGAATTTTATTTTATCCTAGCCGCAGTTGCCGTTGTAAGTGCTGGTATTTTTTGGCGGTTACTTATCGGGACCTTGGTTATGCTTTTAGCAGGCTACTTGGGTGAAACTGGAACTATTAATCCATGGATAGGGTTCATAGTTGGGATGGGTGGTTGGTTATACATCTTGTACGAGATTTTTGCTGGCGAGGCAGGAAAACTGTCGGCCGAAAAATCTGCTGAATCCGTGAAAACTGCCTTTAATACTATGAAGTGGATAGTAACTATC IITVPLQMVEFYFILAAVAVVSAGIFWRLLIGTLVMLLAGYLGETGTINPWIGFIVGMGGWLYILYEIFAGEAGKLSAEKSAESVKTAFNTMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATCACCGTTCCACTTCAAATGGTTGAATTTTATTTTATCCTAGCCGCA---------GTT---GCCGTTGTAAGTGCT---GGTATT------------------------------------TTTTGGCGG---TTACTTATCGGGACCTTGGTTATGCTTTTAGCAGGCTACTTGGGTGAA---------ACT------------------GGA------ACT---------------------------------ATT------------------------------------------------------------------AATCCA------------------TGGATAGGG---TTCATAGTTGGGATGGGTGGTTGGTTATACATCTTGTACGAGATT---------------TTT------GCT---GGCGAGGCAGGAAAACTGTCGGCCGAA------AAA---TCTGCTGAATCCGTG---AAA---ACT---GCC---TTT---AAT---ACTATG---AAGTGGATAGTAACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LLIGTLVMLLAGYLGE---T------G--T-----------I----------------------NP------WIG-FIVGMGGWLYILYEI-----F--A-GEAGKLSAE--K-SAESV-K-T-A-F-N-TM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4]_KJ929233 [IV-Proteo4] PRGD_OTU091_20ba5b589f3294f4b7f6db32657ebb95 gb|KJ929233| PRGD_OTU091_20ba5b589f3294f4b7f6db32657ebb95, putative proteorhodopsin gene, partial cds. PRGD_OTU091_20ba5b589f3294f4b7f6db32657ebb95, putative proteorhodopsin gene, partial cds. KJ929233 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATAATCACCGTTCCACTCCAAATGGTTGAATTTTATTTTATCCTAGCCGCAGTTGCCGTTGTTAGTGCTGGTATTTTCTGGCGGTTACTTATCGGGACCTTGGTTATGCTTTTAGCAGGCTATTTGGGTGAAACTGGAATGATTAATCCATGGGTAGGGTTCATAGTTGGGATGGGTGGTTGGCTATACATCTTGTACGAGATTTTTGCTGGCGAGGCAGGAAAACTGTCGGCCGAAAAATCTTCTGAGTCCGTGAAGACTGCCTTTAATACTATGAAATGGATAGTAACTATC IITVPLQMVEFYFILAAVAVVSAGIFWRLLIGTLVMLLAGYLGETGMINPWVGFIVGMGGWLYILYEIFAGEAGKLSAEKSSESVKTAFNTMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATCACCGTTCCACTCCAAATGGTTGAATTTTATTTTATCCTAGCCGCA---------GTT---GCCGTTGTTAGTGCT---GGTATT------------------------------------TTCTGGCGG---TTACTTATCGGGACCTTGGTTATGCTTTTAGCAGGCTATTTGGGTGAA---------ACT------------------GGA------ATG---------------------------------ATT------------------------------------------------------------------AATCCA------------------TGGGTAGGG---TTCATAGTTGGGATGGGTGGTTGGCTATACATCTTGTACGAGATT---------------TTT------GCT---GGCGAGGCAGGAAAACTGTCGGCCGAA------AAA---TCTTCTGAGTCCGTG---AAG---ACT---GCC---TTT---AAT---ACTATG---AAATGGATAGTAACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LLIGTLVMLLAGYLGE---T------G--M-----------I----------------------NP------WVG-FIVGMGGWLYILYEI-----F--A-GEAGKLSAE--K-SSESV-K-T-A-F-N-TM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4]_KJ929234 [IV-Proteo4] PRGD_OTU091_6f30935ee1f46057a35f79d45498b7dc gb|KJ929234| PRGD_OTU091_6f30935ee1f46057a35f79d45498b7dc, putative proteorhodopsin gene, partial cds. PRGD_OTU091_6f30935ee1f46057a35f79d45498b7dc, putative proteorhodopsin gene, partial cds. KJ929234 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937), Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Indian Ocean (-33.28, 45.35) ATAATCACCGTTCCACTTCAAATGGTTGAATTTTATTTTATTCTAGCCGCAGTTGCCGTTGTAAGTGCTGGTATTTTTTGGCGGTTACTTATCGGGACCTTGGTTATGCTTTTAGCAGGCTACTTGGGTGAAACTGGAATTATTAATCCATGGATAGGGTTCATAGTTGGGATGGGTGGTTGGCTATACATCTTGTACGAGATTTTTGCTGGCGAGGCAGGAAAACTGTCGGCCGAAAAATCTTCTGAATCCGTGAAAACTGCCTTTAATACTATGAAGTGGATAGTGACTATC IITVPLQMVEFYFILAAVAVVSAGIFWRLLIGTLVMLLAGYLGETGIINPWIGFIVGMGGWLYILYEIFAGEAGKLSAEKSSESVKTAFNTMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATCACCGTTCCACTTCAAATGGTTGAATTTTATTTTATTCTAGCCGCA---------GTT---GCCGTTGTAAGTGCT---GGTATT------------------------------------TTTTGGCGG---TTACTTATCGGGACCTTGGTTATGCTTTTAGCAGGCTACTTGGGTGAA---------ACT------------------GGA------ATT---------------------------------ATT------------------------------------------------------------------AATCCA------------------TGGATAGGG---TTCATAGTTGGGATGGGTGGTTGGCTATACATCTTGTACGAGATT---------------TTT------GCT---GGCGAGGCAGGAAAACTGTCGGCCGAA------AAA---TCTTCTGAATCCGTG---AAA---ACT---GCC---TTT---AAT---ACTATG---AAGTGGATAGTGACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LLIGTLVMLLAGYLGE---T------G--I-----------I----------------------NP------WIG-FIVGMGGWLYILYEI-----F--A-GEAGKLSAE--K-SSESV-K-T-A-F-N-TM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4]_KJ929235 [IV-Proteo4] PRGD_OTU091_840f6183447747156b9dec1e899afbc5 gb|KJ929235| PRGD_OTU091_840f6183447747156b9dec1e899afbc5, putative proteorhodopsin gene, partial cds. PRGD_OTU091_840f6183447747156b9dec1e899afbc5, putative proteorhodopsin gene, partial cds. KJ929235 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683) ATAATCACCGTTCCACTTCAAATGGTTGAGTTTTATTTTATCCTAGCCGCAGTTGCCGTTGTAAGTGCTGGTATTTTTTGGCGGTTACTTATCGGGACCTTGGTAATGCTTTTAGCGGGCTACTTGGGTGAAACTGGAATTATTAATCCATGGATAGGGTTCATAGTCGGGATGGGTGGTTGGTTATACATCCTGTATGAGATTTTTGCTGGCGAGGCAGGAAAACTGTCGGCCGAAAAATCTTCTGAATCAGTGAAAACTGCTTTTAATACTATGAAGTGGATAGTAACTATC IITVPLQMVEFYFILAAVAVVSAGIFWRLLIGTLVMLLAGYLGETGIINPWIGFIVGMGGWLYILYEIFAGEAGKLSAEKSSESVKTAFNTMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATCACCGTTCCACTTCAAATGGTTGAGTTTTATTTTATCCTAGCCGCA---------GTT---GCCGTTGTAAGTGCT---GGTATT------------------------------------TTTTGGCGG---TTACTTATCGGGACCTTGGTAATGCTTTTAGCGGGCTACTTGGGTGAA---------ACT------------------GGA------ATT---------------------------------ATT------------------------------------------------------------------AATCCA------------------TGGATAGGG---TTCATAGTCGGGATGGGTGGTTGGTTATACATCCTGTATGAGATT---------------TTT------GCT---GGCGAGGCAGGAAAACTGTCGGCCGAA------AAA---TCTTCTGAATCAGTG---AAA---ACT---GCT---TTT---AAT---ACTATG---AAGTGGATAGTAACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQMVEFYFILAA---V-AVVSA-GI------------FWR-LLIGTLVMLLAGYLGE---T------G--I-----------I----------------------NP------WIG-FIVGMGGWLYILYEI-----F--A-GEAGKLSAE--K-SSESV-K-T-A-F-N-TM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_KJ926755 [IV-Proteo4-b] PRGD_OTU002d_15e8aea2b0e59bbac5db519faf9b1da2 gb|KJ926755| PRGD_OTU002d_15e8aea2b0e59bbac5db519faf9b1da2, putative proteorhodopsin gene, partial cds. PRGD_OTU002d_15e8aea2b0e59bbac5db519faf9b1da2, putative proteorhodopsin gene, partial cds. KJ926755 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATCACTGTTCCTTTACAGATGATTGAATTCTACATTATCCTCGCTGCTGTTGCTGCAGTATCTGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCCGGTGAAGCAGGCTTTATCAATGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCGTACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCGGACAAATGTCCTGCTGCTGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACAGTT LITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTTCCTTTACAGATGATTGAATTCTACATTATCCTCGCTGCT---------GTT---GCTGCAGTATCTGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCCGGTGAA---------GCA------------------GGC------TTT---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCGTACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCGGAC------AAA---TGTCCTGCTGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_KJ926756 [IV-Proteo4-b] PRGD_OTU002d_20464950bf2143afde3fe3a741e21b65 gb|KJ926756| PRGD_OTU002d_20464950bf2143afde3fe3a741e21b65, putative proteorhodopsin gene, partial cds. PRGD_OTU002d_20464950bf2143afde3fe3a741e21b65, putative proteorhodopsin gene, partial cds. KJ926756 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Mediterranean Sea (33.762, 29.175) TTAATCACTGTTCCTTTACAGATGATTGAATTCTACATTATCCTTGCTGCTGTTGCTGCAGTATCAGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCAGGCTTTATCAATGCATGGGCAGGATTTATCGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCGGACAAATGTCCTGCTGCTGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACAGTT LITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTTCCTTTACAGATGATTGAATTCTACATTATCCTTGCTGCT---------GTT---GCTGCAGTATCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCA------------------GGC------TTT---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGCAGGA---TTTATCGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCGGAC------AAA---TGTCCTGCTGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_KJ926762 [IV-Proteo4-b] PRGD_OTU002d_5dcbe9c2aba230edee309cc4dd938512 gb|KJ926762| PRGD_OTU002d_5dcbe9c2aba230edee309cc4dd938512, putative proteorhodopsin gene, partial cds. PRGD_OTU002d_5dcbe9c2aba230edee309cc4dd938512, putative proteorhodopsin gene, partial cds. KJ926762 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATCACTGTTCCTTTACAGATGATTGAATTCTACATTATCCTTGCTGCTGTTGCTGCAGTATCAGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCAGGCTTCATCAATGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCAGACAAATGTCCTGCTGCTGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACAGTT LITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTTCCTTTACAGATGATTGAATTCTACATTATCCTTGCTGCT---------GTT---GCTGCAGTATCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCA------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCAGAC------AAA---TGTCCTGCTGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_KJ926763 [IV-Proteo4-b] PRGD_OTU002d_684d93f61de376d97a2fbced0d81b8be gb|KJ926763| PRGD_OTU002d_684d93f61de376d97a2fbced0d81b8be, putative proteorhodopsin gene, partial cds. PRGD_OTU002d_684d93f61de376d97a2fbced0d81b8be, putative proteorhodopsin gene, partial cds. KJ926763 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATCACTGTTCCTTTACAGATGATTGAATTCTACATTATCCTTGCTGCTGTTGCTGCAGTGTCAGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCAGGCTTCATTAATGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCAGACAAATGTCCTGCTGCTGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACAGTT LITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTTCCTTTACAGATGATTGAATTCTACATTATCCTTGCTGCT---------GTT---GCTGCAGTGTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCA------------------GGC------TTC---------------------------------ATT------------------------------------------------------------------AATGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCAGAC------AAA---TGTCCTGCTGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_KJ926760 [IV-Proteo4-b] PRGD_OTU002d_4c21ed1fd1e44557594ebf9f502ed6ae gb|KJ926760| PRGD_OTU002d_4c21ed1fd1e44557594ebf9f502ed6ae, putative proteorhodopsin gene, partial cds. PRGD_OTU002d_4c21ed1fd1e44557594ebf9f502ed6ae, putative proteorhodopsin gene, partial cds. KJ926760 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175; 33.935, 18.508), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCAGTTGCTGCAGTGTCAGCTGGTATTTTCTGGAGACTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGCTTCATCAACGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTGACAAATGTCCTGCAGCTGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACAGTT LITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTTCCATTACAGATGATTGAATTCTACATTATCCTTGCTGCA---------GTT---GCTGCAGTGTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTGTTAATCGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTGAC------AAA---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_KJ926768 [IV-Proteo4-b] PRGD_OTU002d_c8185736569dc9203b7dc469915140c9 gb|KJ926768| PRGD_OTU002d_c8185736569dc9203b7dc469915140c9, putative proteorhodopsin gene, partial cds. PRGD_OTU002d_c8185736569dc9203b7dc469915140c9, putative proteorhodopsin gene, partial cds. KJ926768 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637) TTAATCACTGTTCCATTACAGATGATTGAATTTTACATTATCCTTGCTGCAGTTGCTGCAGTGTCAGCTGGTATTTTCTGGAGGCTATTAATAGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGCTTCATCAACGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTGACAAATGTCCTGCGGCTGTTCAAACTGCTTTCAACACAATGAGATGGATCGTTACAGTT LITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTTCCATTACAGATGATTGAATTTTACATTATCCTTGCTGCA---------GTT---GCTGCAGTGTCAGCT---GGTATT------------------------------------TTCTGGAGG---CTATTAATAGGTACTTTAGTGATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTGAC------AAA---TGTCCTGCGGCTGTT---CAA---ACT---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_KJ926757 [IV-Proteo4-b] PRGD_OTU002d_279938267eb0b71247d26fa83f7be61d gb|KJ926757| PRGD_OTU002d_279938267eb0b71247d26fa83f7be61d, putative proteorhodopsin gene, partial cds. PRGD_OTU002d_279938267eb0b71247d26fa83f7be61d, putative proteorhodopsin gene, partial cds. KJ926757 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-33.28, 45.35) TTAATCACTGTTCCTTTACAGATGATTGAATTTTACATAATCCTTGCTGCTGTTGCTACAGTTTCAGCTGGTATTTTCTGGAGACTATTAATTGGTACTTTAGTTATGCTTGTAGCTGGTTATGCTGGTGAAGCAGGCTTCATCAATGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTGACAAGTGTCCTGCAGCTGTTCAAACAGCTTTCAACACAATGAGATGGATTGTTACTGTT LITVPLQMIEFYIILAAVATVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTTCCTTTACAGATGATTGAATTTTACATAATCCTTGCTGCT---------GTT---GCTACAGTTTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTATTAATTGGTACTTTAGTTATGCTTGTAGCTGGTTATGCTGGTGAA---------GCA------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTGAC------AAG---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATTGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYIILAA---V-ATVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_KJ926753 [IV-Proteo4-b] PRGD_OTU002d_otuREP_b74e5e27b047eb236a35c2a75c7838ca gb|KJ926753| PRGD_OTU002d_otuREP_b74e5e27b047eb236a35c2a75c7838ca, putative proteorhodopsin gene, partial cds. PRGD_OTU002d_otuREP_b74e5e27b047eb236a35c2a75c7838ca, putative proteorhodopsin gene, partial cds. KJ926753 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACTGTTCCTTTACAGATGATTGAATTTTACATAATCCTTGCTGCTGTTGCTACAGTTTCAGCTGGTATTTTCTGGAGACTATTAATTGGTACTTTAGTAATGCTTGTAGCTGGTTATGCTGGTGAAGCAGGCTTCATCAACGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTGACAAGTGTCCTGCAGCTGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACTGTT LITVPLQMIEFYIILAAVATVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTTCCTTTACAGATGATTGAATTTTACATAATCCTTGCTGCT---------GTT---GCTACAGTTTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTATTAATTGGTACTTTAGTAATGCTTGTAGCTGGTTATGCTGGTGAA---------GCA------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTGAC------AAG---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYIILAA---V-ATVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_KJ926754 [IV-Proteo4-b] PRGD_OTU002d_1189408039f3930ac27c0be1895877a0 gb|KJ926754| PRGD_OTU002d_1189408039f3930ac27c0be1895877a0, putative proteorhodopsin gene, partial cds. PRGD_OTU002d_1189408039f3930ac27c0be1895877a0, putative proteorhodopsin gene, partial cds. KJ926754 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATCACTGTTCCTTTACAGATGATTGAATTTTACATAATCCTTGCTGCTGTTGCTACAGTTTCAGCTGGTATTTTCTGGAGACTTTTAATTGGTACTTTAGTGATGCTAGTAGCTGGTTATGCTGGTGAAGCAGGCTTCATCAACGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTGACAAGTGTCCTGCAGCTGTTCAAACAGCTTTTAACACAATGAGATGGATTGTTACAGTT LITVPLQMIEFYIILAAVATVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTTCCTTTACAGATGATTGAATTTTACATAATCCTTGCTGCT---------GTT---GCTACAGTTTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTTTTAATTGGTACTTTAGTGATGCTAGTAGCTGGTTATGCTGGTGAA---------GCA------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTGAC------AAG---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTT---AAC---ACAATG---AGATGGATTGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYIILAA---V-ATVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_KJ926769 [IV-Proteo4-b] PRGD_OTU002d_e33891ead615fef2331efddf840949c2 gb|KJ926769| PRGD_OTU002d_e33891ead615fef2331efddf840949c2, putative proteorhodopsin gene, partial cds. PRGD_OTU002d_e33891ead615fef2331efddf840949c2, putative proteorhodopsin gene, partial cds. KJ926769 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175; 33.935, 18.508), Indian Ocean (-14.48, 113.45) TTAATCACTGTTCCTTTACAGATGATTGAATTTTACATAATCCTTGCTGCTGTTGCTACAGTTTCAGCTGGTATTTTCTGGAGACTATTAATTGGTACTTTAGTAATGCTTGTAGCTGGTTATGCTGGTGAAGCAGGTTTCATCAACGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCTGATAAATGTCCTGCAGCTGTTCAAACAGCTTTCAACACAATGAGATGGATTGTTACAGTT LITVPLQMIEFYIILAAVATVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTTCCTTTACAGATGATTGAATTTTACATAATCCTTGCTGCT---------GTT---GCTACAGTTTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTATTAATTGGTACTTTAGTAATGCTTGTAGCTGGTTATGCTGGTGAA---------GCA------------------GGT------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCTGAT------AAA---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATTGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYIILAA---V-ATVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_KJ926758 [IV-Proteo4-b] PRGD_OTU002d_2a44b5780179f9d11537544e86b79abb gb|KJ926758| PRGD_OTU002d_2a44b5780179f9d11537544e86b79abb, putative proteorhodopsin gene, partial cds. PRGD_OTU002d_2a44b5780179f9d11537544e86b79abb, putative proteorhodopsin gene, partial cds. KJ926758 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATCACTGTTCCTTTACAGATGATTGAATTTTACATAATCCTTGCTGCTGTTGCTACAGTTTCAGCTGGTATTTTCTGGAGACTATTAATTGGTACTTTAGTGATGCTTGTAGCTGGTTATGCTGGTGAAGCAGGCTTCATCAACGCATGGGCAGGATTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCCGCTGCTGATAAATGTCCTGCAGCAGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACTGTT LITVPLQMIEFYIILAAVATVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTTCCTTTACAGATGATTGAATTTTACATAATCCTTGCTGCT---------GTT---GCTACAGTTTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTATTAATTGGTACTTTAGTGATGCTTGTAGCTGGTTATGCTGGTGAA---------GCA------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGA---TTCATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCCGCTGCTGAT------AAA---TGTCCTGCAGCAGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYIILAA---V-ATVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_KJ926766 [IV-Proteo4-b] PRGD_OTU002d_a8622d351f969d130d6caed0d9809b39 gb|KJ926766| PRGD_OTU002d_a8622d351f969d130d6caed0d9809b39, putative proteorhodopsin gene, partial cds. PRGD_OTU002d_a8622d351f969d130d6caed0d9809b39, putative proteorhodopsin gene, partial cds. KJ926766 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Indian Ocean (-33.28, 45.35) TTAATCACTGTTCCTTTACAGATGATTGAATTTTATATAATCCTTGCTGCTGTTGCTACAGTTTCAGCTGGTATTTTCTGGAGACTATTAATTGGTACTTTAGTGATGCTCGTAGCTGGTTATGCTGGTGAAGCAGGCTTCATCAACGCATGGGCAGGATTTATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCAGGTAAAGCTGCTGCTGACAAATGTCCTGCAGCTGTTCAAACAGCTTTCAATACAATGAGATGGATCGTTACAGTT LITVPLQMIEFYIILAAVATVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTTCCTTTACAGATGATTGAATTTTATATAATCCTTGCTGCT---------GTT---GCTACAGTTTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTATTAATTGGTACTTTAGTGATGCTCGTAGCTGGTTATGCTGGTGAA---------GCA------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGA---TTTATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCAGGTAAAGCTGCTGCTGAC------AAA---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTC---AAT---ACAATG---AGATGGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYIILAA---V-ATVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_KJ926767 [IV-Proteo4-b] PRGD_OTU002d_bd55237142bb2f6489f7190ab5730aee gb|KJ926767| PRGD_OTU002d_bd55237142bb2f6489f7190ab5730aee, putative proteorhodopsin gene, partial cds. PRGD_OTU002d_bd55237142bb2f6489f7190ab5730aee, putative proteorhodopsin gene, partial cds. KJ926767 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATCACTGTGCCTTTACAGATGATTGAATTTTATATAATCCTTGCTGCTGTTGCTACAGTTTCAGCTGGTATTTTCTGGAGACTATTAATTGGTACTTTAGTGATGCTCGTAGCTGGTTATGCTGGTGAAGCAGGCTTTATCAACGCATGGGCAGGATTCATTGTTGGTCTAGCTGGTTGGGCATACATTTTATACGAAATTTTTGCTGGTGAAGCAGGTAAAGCTGCTGCTGACAAATGTCCTGCAGCTGTTCAAACAGCTTTTAACACAATGAGATGGATCGTTACAGTT LITVPLQMIEFYIILAAVATVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCTTTACAGATGATTGAATTTTATATAATCCTTGCTGCT---------GTT---GCTACAGTTTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTATTAATTGGTACTTTAGTGATGCTCGTAGCTGGTTATGCTGGTGAA---------GCA------------------GGC------TTT---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGCAGGA---TTCATTGTTGGTCTAGCTGGTTGGGCATACATTTTATACGAAATT---------------TTT------GCT---GGTGAAGCAGGTAAAGCTGCTGCTGAC------AAA---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTT---AAC---ACAATG---AGATGGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYIILAA---V-ATVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_KJ926765 [IV-Proteo4-b] PRGD_OTU002d_85049b6ee89a9e2545c11bab81541105 gb|KJ926765| PRGD_OTU002d_85049b6ee89a9e2545c11bab81541105, putative proteorhodopsin gene, partial cds. PRGD_OTU002d_85049b6ee89a9e2545c11bab81541105, putative proteorhodopsin gene, partial cds. KJ926765 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Mediterranean Sea (33.762, 29.175; 33.935, 18.508), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTAATCACTGTTCCTTTACAGATGATTGAATTTTACATAATCCTTGCTGCTGTTGCTACAGTTTCAGCTGGTATTTTCTGGAGACTATTAATTGGTACTTTAGTAATGCTAGTAGCTGGTTATGCCGGTGAAGCAGGCTTCATCAATGCATGGGCAGGATTCATTGTTGGTCTAGCTGGTTGGGCATACATCTTATATGAAATTTTTGCTGGTGAAGCAGGTAAAGCTGCTGCTGACAAATGTCCTGCAGCTGTTCAAACAGCTTTCAACACAATGAGATGGATCGTTACGGTT LITVPLQMIEFYIILAAVATVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTTCCTTTACAGATGATTGAATTTTACATAATCCTTGCTGCT---------GTT---GCTACAGTTTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTATTAATTGGTACTTTAGTAATGCTAGTAGCTGGTTATGCCGGTGAA---------GCA------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGCAGGA---TTCATTGTTGGTCTAGCTGGTTGGGCATACATCTTATATGAAATT---------------TTT------GCT---GGTGAAGCAGGTAAAGCTGCTGCTGAC------AAA---TGTCCTGCAGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATCGTTACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYIILAA---V-ATVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_KJ926761 [IV-Proteo4-b] PRGD_OTU002d_5ae6127961dac74db6a50101a8f4ffca gb|KJ926761| PRGD_OTU002d_5ae6127961dac74db6a50101a8f4ffca, putative proteorhodopsin gene, partial cds. PRGD_OTU002d_5ae6127961dac74db6a50101a8f4ffca, putative proteorhodopsin gene, partial cds. KJ926761 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937), Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACTGTTCCATTACAGATGATTGAATTTTACATTATCCTTGCTGCTGTTGCTACAGTATCAGCTGGTATCTTCTGGAGACTTTTAATTGGTACTCTAGTAATGCTTGTTGCTGGTTATGCTGGTGAAGCTGGCTTTATCAATGCATGGGCAGGATTTATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCCGCTGCAGACAAATGTCCTGCTGCTGTTCAAACAGCTTTCAACACAATGAGATGGATTGTTACAGTC LITVPLQMIEFYIILAAVATVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTTCCATTACAGATGATTGAATTTTACATTATCCTTGCTGCT---------GTT---GCTACAGTATCAGCT---GGTATC------------------------------------TTCTGGAGA---CTTTTAATTGGTACTCTAGTAATGCTTGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGC------TTT---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGCAGGA---TTTATTGTAGGTCTAGCTGGTTGGGCATACATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCCGCTGCAGAC------AAA---TGTCCTGCTGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATTGTTACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYIILAA---V-ATVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_KJ926770 [IV-Proteo4-b] PRGD_OTU002d_f0620ff77cb035514ffc43e958781e51 gb|KJ926770| PRGD_OTU002d_f0620ff77cb035514ffc43e958781e51, putative proteorhodopsin gene, partial cds. PRGD_OTU002d_f0620ff77cb035514ffc43e958781e51, putative proteorhodopsin gene, partial cds. KJ926770 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATCACTGTTCCTTTACAGATGATTGAATTCTACATCATCCTTGCTGCTGTTGCTACAGTATCTGCTGGTATTTTCTGGAGACTATTAATTGGTACTTTAGTAATGCTAGTTGCTGGTTATGCTGGTGAAGCTGGCTTTATCAATGCATGGGCAGGATTTATTGTAGGTCTAGCTGGTTGGGCATATATCTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGCTGCTGCGGACAAATGTCCTCCAGCTGTTCAAACAGCCTTCAACACAATGAGATGGATTGTTACAGTC LITVPLQMIEFYIILAAVATVSAGIFWRLLIGTLVMLVAGYAGEAGFINAWAGFIVGLAGWAYILYEIFAGEAGKAAADKCPPAVQTAFNTMRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTTCCTTTACAGATGATTGAATTCTACATCATCCTTGCTGCT---------GTT---GCTACAGTATCTGCT---GGTATT------------------------------------TTCTGGAGA---CTATTAATTGGTACTTTAGTAATGCTAGTTGCTGGTTATGCTGGTGAA---------GCT------------------GGC------TTT---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGCAGGA---TTTATTGTAGGTCTAGCTGGTTGGGCATATATCTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGCTGCTGCGGAC------AAA---TGTCCTCCAGCTGTT---CAA---ACA---GCC---TTC---AAC---ACAATG---AGATGGATTGTTACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYIILAA---V-ATVSA-GI------------FWR-LLIGTLVMLVAGYAGE---A------G--F-----------I----------------------NA------WAG-FIVGLAGWAYILYEI-----F--A-GEAGKAAAD--K-CPPAV-Q-T-A-F-N-TM-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_KJ926759 [IV-Proteo4-b] PRGD_OTU002d_3fa08cfb631056c4fe187204d1e57657 gb|KJ926759| PRGD_OTU002d_3fa08cfb631056c4fe187204d1e57657, putative proteorhodopsin gene, partial cds. PRGD_OTU002d_3fa08cfb631056c4fe187204d1e57657, putative proteorhodopsin gene, partial cds. KJ926759 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175; 33.935, 18.508) TTAATTACTGTTCCATTACAGATGATTGAATTTTATATAATTCTTGCTGCCGTTGCTGCGGTCTCAGCTGGTATTTTCTGGAGACTATTAATTGGTACTTTAGTGATGCTAGTTGCTGGTTACATGGGTGAAGCTGGCTTCATCAATGCATGGGCAGGATTTATAGTAGGTATGGCTGGTTGGGCATACATCTTATATGAAATCTTTGCTGGTGAAGCTGGAAAAGCTGCTGCAGATAAGTGTCCTGCTGCTGTTCAAACAGCTTTCAACACAATGAGATGGATTGTTACTATT LITVPLQMIEFYIILAAVAAVSAGIFWRLLIGTLVMLVAGYMGEAGFINAWAGFIVGMAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTTCCATTACAGATGATTGAATTTTATATAATTCTTGCTGCC---------GTT---GCTGCGGTCTCAGCT---GGTATT------------------------------------TTCTGGAGA---CTATTAATTGGTACTTTAGTGATGCTAGTTGCTGGTTACATGGGTGAA---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGCAGGA---TTTATAGTAGGTATGGCTGGTTGGGCATACATCTTATATGAAATC---------------TTT------GCT---GGTGAAGCTGGAAAAGCTGCTGCAGAT------AAG---TGTCCTGCTGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATTGTTACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYIILAA---V-AAVSA-GI------------FWR-LLIGTLVMLVAGYMGE---A------G--F-----------I----------------------NA------WAG-FIVGMAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-b]_KJ926764 [IV-Proteo4-b] PRGD_OTU002d_6d76561a32a4a9b43b60ea2e66172255 gb|KJ926764| PRGD_OTU002d_6d76561a32a4a9b43b60ea2e66172255, putative proteorhodopsin gene, partial cds. PRGD_OTU002d_6d76561a32a4a9b43b60ea2e66172255, putative proteorhodopsin gene, partial cds. KJ926764 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAATCACTGTTCCATTACAGATGATTGAATTTTATATTATCCTAGCTGCCGTTGCTACAGTATCAGCAGGTATTTTCTGGAGACTATTAATTGGTACTCTAGTAATGCTAGTTGCTGGTTACATGGGTGAAGCTGGTTTCATCAATGCATGGGCTGGATTTATTGTTGGTATGGCTGGTTGGGCATACATCTTATATGAAATCTTTGCTGGTGAGGCTGGAAAAGCTGCAGCTGACAAATGTCCTGCTGCTGTTCAAACAGCTTTCAACACAATGAGATGGATTGTAACTATT LITVPLQMIEFYIILAAVATVSAGIFWRLLIGTLVMLVAGYMGEAGFINAWAGFIVGMAGWAYILYEIFAGEAGKAAADKCPAAVQTAFNTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTTCCATTACAGATGATTGAATTTTATATTATCCTAGCTGCC---------GTT---GCTACAGTATCAGCA---GGTATT------------------------------------TTCTGGAGA---CTATTAATTGGTACTCTAGTAATGCTAGTTGCTGGTTACATGGGTGAA---------GCT------------------GGT------TTC---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGCTGGA---TTTATTGTTGGTATGGCTGGTTGGGCATACATCTTATATGAAATC---------------TTT------GCT---GGTGAGGCTGGAAAAGCTGCAGCTGAC------AAA---TGTCCTGCTGCTGTT---CAA---ACA---GCT---TTC---AAC---ACAATG---AGATGGATTGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYIILAA---V-ATVSA-GI------------FWR-LLIGTLVMLVAGYMGE---A------G--F-----------I----------------------NA------WAG-FIVGMAGWAYILYEI-----F--A-GEAGKAAAD--K-CPAAV-Q-T-A-F-N-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-a]_KJ928123 [IV-Proteo4-a] PRGD_OTU025_47f5dd00ea9b20d840d6a0538cde8ad9 gb|KJ928123| PRGD_OTU025_47f5dd00ea9b20d840d6a0538cde8ad9, putative proteorhodopsin gene, partial cds. PRGD_OTU025_47f5dd00ea9b20d840d6a0538cde8ad9, putative proteorhodopsin gene, partial cds. KJ928123 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45) ATAATCACAGTTCCATTACAAATGATCGAATTCTATTTAATCTTAGCTGCTTGTACGGCCATTGCTGGTGGAGTATTCTGGAGATTATTTGTGGGTTCACTTGTGATGTTAATTGGTGGATATCTTGGTGAGGCAGGCTTTATCAATGCCACACTAGGTTTTGTTATCGGAATGGCTGGTTGGATATTCATTCTTTATGAAATCTTTGCTGGTGAAGCAAGTAAAGTTAATGCTGCTGAAGCCCCAGATTCTGTAAAAACAGCTTATAATACTATGAAATGGATTGTTACAATT IITVPLQMIEFYLILAACTAIAGGVFWRLFVGSLVMLIGGYLGEAGFINATLGFVIGMAGWIFILYEIFAGEASKVNAAEAPDSVKTAYNTMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATCACAGTTCCATTACAAATGATCGAATTCTATTTAATCTTAGCTGCT---------TGT---ACGGCCATTGCTGGT---GGAGTA------------------------------------TTCTGGAGA---TTATTTGTGGGTTCACTTGTGATGTTAATTGGTGGATATCTTGGTGAG---------GCA------------------GGC------TTT---------------------------------ATC------------------------------------------------------------------AATGCC------------------ACACTAGGT---TTTGTTATCGGAATGGCTGGTTGGATATTCATTCTTTATGAAATC---------------TTT------GCT---GGTGAAGCAAGTAAAGTTAATGCTGCT------GAA---GCCCCAGATTCTGTA---AAA---ACA---GCT---TAT---AAT---ACTATG---AAATGGATTGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQMIEFYLILAA---C-TAIAG-GV------------FWR-LFVGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FVIGMAGWIFILYEI-----F--A-GEASKVNAA--E-APDSV-K-T-A-Y-N-TM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-a]_KJ928125 [IV-Proteo4-a] PRGD_OTU025_49bfe61569bcfd54128f7511e5cd2a25 gb|KJ928125| PRGD_OTU025_49bfe61569bcfd54128f7511e5cd2a25, putative proteorhodopsin gene, partial cds. PRGD_OTU025_49bfe61569bcfd54128f7511e5cd2a25, putative proteorhodopsin gene, partial cds. KJ928125 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) ATAATCACAGTTCCATTACAAATGATTGAATTCTATTTAATCTTAGCTGCTTGTACAGCCATTGCTGGTGGAGTATTCTGGAGATTATTTGTGGGTTCACTAGTGATGTTAATTGGTGGATATCTGGGTGAGGCAGGCTTTATCAATGCCACACTAGGTTTTGTGATAGGAATGGCTGGTTGGATATTCATTCTTTATGAAATCTTTGCTGGTGAAGCAAGTAAAGTTAATGCTGCTGAAGCCCCAGATTCTGTAAAAACAGCTTATAATACTATGAAATGGATTGTTACAATT IITVPLQMIEFYLILAACTAIAGGVFWRLFVGSLVMLIGGYLGEAGFINATLGFVIGMAGWIFILYEIFAGEASKVNAAEAPDSVKTAYNTMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATCACAGTTCCATTACAAATGATTGAATTCTATTTAATCTTAGCTGCT---------TGT---ACAGCCATTGCTGGT---GGAGTA------------------------------------TTCTGGAGA---TTATTTGTGGGTTCACTAGTGATGTTAATTGGTGGATATCTGGGTGAG---------GCA------------------GGC------TTT---------------------------------ATC------------------------------------------------------------------AATGCC------------------ACACTAGGT---TTTGTGATAGGAATGGCTGGTTGGATATTCATTCTTTATGAAATC---------------TTT------GCT---GGTGAAGCAAGTAAAGTTAATGCTGCT------GAA---GCCCCAGATTCTGTA---AAA---ACA---GCT---TAT---AAT---ACTATG---AAATGGATTGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQMIEFYLILAA---C-TAIAG-GV------------FWR-LFVGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FVIGMAGWIFILYEI-----F--A-GEASKVNAA--E-APDSV-K-T-A-Y-N-TM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-a]_KJ928132 [IV-Proteo4-a] PRGD_OTU025_e129c1b23fd7683c0d300679c02a3695 gb|KJ928132| PRGD_OTU025_e129c1b23fd7683c0d300679c02a3695, putative proteorhodopsin gene, partial cds. PRGD_OTU025_e129c1b23fd7683c0d300679c02a3695, putative proteorhodopsin gene, partial cds. KJ928132 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264), Mediterranean Sea (33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) ATAATCACAGTTCCATTACAAATGATCGAATTCTATTTAATCTTAGCTGCTTGTACAGCCATTGCTGGTGGAGTATTCTGGAGATTATTTGTGGGTTCACTTGTGATGTTAATTGGTGGATATCTTGGTGAGGCAGGTTTTATCAACGCTACACTAGGTTTTGTTATCGGAATGGCTGGTTGGATATTCATTCTTTATGAAATCTTTGCTGGTGAAGCAAGTAAAGTTAATGCTGCTGAAGCCCCAGATTCTGTGAAAACAGCTTATAATACTATGAAATGGATTGTTACAATT IITVPLQMIEFYLILAACTAIAGGVFWRLFVGSLVMLIGGYLGEAGFINATLGFVIGMAGWIFILYEIFAGEASKVNAAEAPDSVKTAYNTMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATCACAGTTCCATTACAAATGATCGAATTCTATTTAATCTTAGCTGCT---------TGT---ACAGCCATTGCTGGT---GGAGTA------------------------------------TTCTGGAGA---TTATTTGTGGGTTCACTTGTGATGTTAATTGGTGGATATCTTGGTGAG---------GCA------------------GGT------TTT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTTGTTATCGGAATGGCTGGTTGGATATTCATTCTTTATGAAATC---------------TTT------GCT---GGTGAAGCAAGTAAAGTTAATGCTGCT------GAA---GCCCCAGATTCTGTG---AAA---ACA---GCT---TAT---AAT---ACTATG---AAATGGATTGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQMIEFYLILAA---C-TAIAG-GV------------FWR-LFVGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FVIGMAGWIFILYEI-----F--A-GEASKVNAA--E-APDSV-K-T-A-Y-N-TM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-a]_KJ928129 [IV-Proteo4-a] PRGD_OTU025_8203c01239dc95acb6c3dbc868b77ff1 gb|KJ928129| PRGD_OTU025_8203c01239dc95acb6c3dbc868b77ff1, putative proteorhodopsin gene, partial cds. PRGD_OTU025_8203c01239dc95acb6c3dbc868b77ff1, putative proteorhodopsin gene, partial cds. KJ928129 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175) ATAATCACAGTTCCATTACAAATGATCGAATTCTATTTAATCTTAGCTGCTTGTACAGCCATTGCTGGTGGAGTATTCTGGAGATTATTTGTGGGTTCACTTGTGATGTTAATTGGTGGATATCTTGGTGAGGCAGGTTTTATCAACGCTACACTAGGTTTTGTTATCGGAATGGCTGGTTGGATATTCATTCTTTATGAAATCTTTGCTGGTGAAGCAAGTAAAGTTAATGCTGCTGAAGCCCCAGATTCTGTTAAAACGGCTTATAATACTATGAAATGGATTGTTACAATT IITVPLQMIEFYLILAACTAIAGGVFWRLFVGSLVMLIGGYLGEAGFINATLGFVIGMAGWIFILYEIFAGEASKVNAAEAPDSVKTAYNTMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATCACAGTTCCATTACAAATGATCGAATTCTATTTAATCTTAGCTGCT---------TGT---ACAGCCATTGCTGGT---GGAGTA------------------------------------TTCTGGAGA---TTATTTGTGGGTTCACTTGTGATGTTAATTGGTGGATATCTTGGTGAG---------GCA------------------GGT------TTT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTTGTTATCGGAATGGCTGGTTGGATATTCATTCTTTATGAAATC---------------TTT------GCT---GGTGAAGCAAGTAAAGTTAATGCTGCT------GAA---GCCCCAGATTCTGTT---AAA---ACG---GCT---TAT---AAT---ACTATG---AAATGGATTGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQMIEFYLILAA---C-TAIAG-GV------------FWR-LFVGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FVIGMAGWIFILYEI-----F--A-GEASKVNAA--E-APDSV-K-T-A-Y-N-TM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-a]_KJ928136 [IV-Proteo4-a] PRGD_OTU025_f5a76dab932ca206fad334a825752928 gb|KJ928136| PRGD_OTU025_f5a76dab932ca206fad334a825752928, putative proteorhodopsin gene, partial cds. PRGD_OTU025_f5a76dab932ca206fad334a825752928, putative proteorhodopsin gene, partial cds. KJ928136 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (33.762, 29.175), Indian Ocean (-33.28, 45.35) ATCATCACAGTTCCATTACAAATGATTGAATTCTATTTAATCTTAGCTGCTTGTACAGCCATTGCTGGCGGAGTATTCTGGAGATTATTTGTTGGTTCACTAGTAATGTTAATTGGTGGATATCTTGGTGAGGCAGGTTTTATCAACGCTACACTAGGTTTTGTTATCGGAATGGCTGGTTGGATATTCATTCTTTATGAAATCTTTGCTGGTGAAGCAAGTAAAGTTAATGCTGCTGAAGCTCCAGATTCTGTAAAAACAGCTTATAATACAATGAAATGGATCGTTACAATT IITVPLQMIEFYLILAACTAIAGGVFWRLFVGSLVMLIGGYLGEAGFINATLGFVIGMAGWIFILYEIFAGEASKVNAAEAPDSVKTAYNTMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCATCACAGTTCCATTACAAATGATTGAATTCTATTTAATCTTAGCTGCT---------TGT---ACAGCCATTGCTGGC---GGAGTA------------------------------------TTCTGGAGA---TTATTTGTTGGTTCACTAGTAATGTTAATTGGTGGATATCTTGGTGAG---------GCA------------------GGT------TTT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTTGTTATCGGAATGGCTGGTTGGATATTCATTCTTTATGAAATC---------------TTT------GCT---GGTGAAGCAAGTAAAGTTAATGCTGCT------GAA---GCTCCAGATTCTGTA---AAA---ACA---GCT---TAT---AAT---ACAATG---AAATGGATCGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQMIEFYLILAA---C-TAIAG-GV------------FWR-LFVGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FVIGMAGWIFILYEI-----F--A-GEASKVNAA--E-APDSV-K-T-A-Y-N-TM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-a]_KJ928120 [IV-Proteo4-a] PRGD_OTU025_otuREP_f465188fa27324c4502c022745666606 gb|KJ928120| PRGD_OTU025_otuREP_f465188fa27324c4502c022745666606, putative proteorhodopsin gene, partial cds. PRGD_OTU025_otuREP_f465188fa27324c4502c022745666606, putative proteorhodopsin gene, partial cds. KJ928120 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Indian Ocean (-35.05, 23.73; -14.48, 113.45) ATAATCACAGTTCCATTACAAATGATTGAATTCTATTTAATCTTAGCTGCTTGTACAGCCATTGCTGGCGGAGTATTCTGGAGATTATTTGTTGGTTCACTAGTAATGTTAATTGGTGGATATCTTGGTGAGGCAGGTTTTATCAACGCTACACTAGGTTTTGTTATTGGAATGGCTGGTTGGATATTCATTCTTTATGAAATTTTTGCTGGTGAAGCAAGTAAAGTTAATGCTGCTGAAGCGCCAGACTCTGTTAAAACAGCTTACAACACCATGAAATGGATAGTAACAATT IITVPLQMIEFYLILAACTAIAGGVFWRLFVGSLVMLIGGYLGEAGFINATLGFVIGMAGWIFILYEIFAGEASKVNAAEAPDSVKTAYNTMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATCACAGTTCCATTACAAATGATTGAATTCTATTTAATCTTAGCTGCT---------TGT---ACAGCCATTGCTGGC---GGAGTA------------------------------------TTCTGGAGA---TTATTTGTTGGTTCACTAGTAATGTTAATTGGTGGATATCTTGGTGAG---------GCA------------------GGT------TTT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTTGTTATTGGAATGGCTGGTTGGATATTCATTCTTTATGAAATT---------------TTT------GCT---GGTGAAGCAAGTAAAGTTAATGCTGCT------GAA---GCGCCAGACTCTGTT---AAA---ACA---GCT---TAC---AAC---ACCATG---AAATGGATAGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQMIEFYLILAA---C-TAIAG-GV------------FWR-LFVGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FVIGMAGWIFILYEI-----F--A-GEASKVNAA--E-APDSV-K-T-A-Y-N-TM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-a]_KJ928126 [IV-Proteo4-a] PRGD_OTU025_4a26b3a4300ccd3db8fdbaea90a4e8eb gb|KJ928126| PRGD_OTU025_4a26b3a4300ccd3db8fdbaea90a4e8eb, putative proteorhodopsin gene, partial cds. PRGD_OTU025_4a26b3a4300ccd3db8fdbaea90a4e8eb, putative proteorhodopsin gene, partial cds. KJ928126 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-33.28, 45.35) ATAATTACAGTTCCATTACAAATGATTGAATTCTATTTAATCCTAGCTGCTTGTACAGCCATTGCTGGGGGAGTATTCTGGAGATTATTTATAGGATCAATGGTTATGTTAATTGGTGGCTACCTTGGTGAAGCTGGTTTTATAAACGTAACTCTTGGCTTTGTAATAGGAATGGCTGGTTGGATATTCATTCTATATGAAATTTTTGCTGGTGAAGCTGGAAAAGTTAATGCAGCTGAAGCGCCGGACTCGGTTAAAACCGCTTTTAACACCATGAAATGGATTGTTACAATT IITVPLQMIEFYLILAACTAIAGGVFWRLFIGSMVMLIGGYLGEAGFINVTLGFVIGMAGWIFILYEIFAGEAGKVNAAEAPDSVKTAFNTMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATTACAGTTCCATTACAAATGATTGAATTCTATTTAATCCTAGCTGCT---------TGT---ACAGCCATTGCTGGG---GGAGTA------------------------------------TTCTGGAGA---TTATTTATAGGATCAATGGTTATGTTAATTGGTGGCTACCTTGGTGAA---------GCT------------------GGT------TTT---------------------------------ATA------------------------------------------------------------------AACGTA------------------ACTCTTGGC---TTTGTAATAGGAATGGCTGGTTGGATATTCATTCTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGAAAAGTTAATGCAGCT------GAA---GCGCCGGACTCGGTT---AAA---ACC---GCT---TTT---AAC---ACCATG---AAATGGATTGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQMIEFYLILAA---C-TAIAG-GV------------FWR-LFIGSMVMLIGGYLGE---A------G--F-----------I----------------------NV------TLG-FVIGMAGWIFILYEI-----F--A-GEAGKVNAA--E-APDSV-K-T-A-F-N-TM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-a]_KJ928133 [IV-Proteo4-a] PRGD_OTU025_e250f4c7cce9fc8f7838a781262e7caf gb|KJ928133| PRGD_OTU025_e250f4c7cce9fc8f7838a781262e7caf, putative proteorhodopsin gene, partial cds. PRGD_OTU025_e250f4c7cce9fc8f7838a781262e7caf, putative proteorhodopsin gene, partial cds. KJ928133 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937) ATAATTACAGTTCCATTACAAATGATTGAATTCTATTTAATCCTAGCTGCTTGTACAGCCATTGCTGGGGGAGTATTCTGGAGATTATTTATAGGATCAATGGTTATGTTAATTGGTGGATACCTTGGTGAAGCTGGTTTTATAAACGTAACTCTTGGCTTTGTTATAGGAATGGCTGGTTGGATATTCATTCTATATGAAATCTTTGCTGGTGAAGCTGGAAAAGTTAATGCAGCTGAAGCGCCAGACTCGGTTAAAACCGCTTTTAACACCATGAAATGGATTGTTACAATT IITVPLQMIEFYLILAACTAIAGGVFWRLFIGSMVMLIGGYLGEAGFINVTLGFVIGMAGWIFILYEIFAGEAGKVNAAEAPDSVKTAFNTMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATTACAGTTCCATTACAAATGATTGAATTCTATTTAATCCTAGCTGCT---------TGT---ACAGCCATTGCTGGG---GGAGTA------------------------------------TTCTGGAGA---TTATTTATAGGATCAATGGTTATGTTAATTGGTGGATACCTTGGTGAA---------GCT------------------GGT------TTT---------------------------------ATA------------------------------------------------------------------AACGTA------------------ACTCTTGGC---TTTGTTATAGGAATGGCTGGTTGGATATTCATTCTATATGAAATC---------------TTT------GCT---GGTGAAGCTGGAAAAGTTAATGCAGCT------GAA---GCGCCAGACTCGGTT---AAA---ACC---GCT---TTT---AAC---ACCATG---AAATGGATTGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQMIEFYLILAA---C-TAIAG-GV------------FWR-LFIGSMVMLIGGYLGE---A------G--F-----------I----------------------NV------TLG-FVIGMAGWIFILYEI-----F--A-GEAGKVNAA--E-APDSV-K-T-A-F-N-TM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-a]_KJ928127 [IV-Proteo4-a] PRGD_OTU025_66fe3e82bf58babef8f3c9d5011113d7 gb|KJ928127| PRGD_OTU025_66fe3e82bf58babef8f3c9d5011113d7, putative proteorhodopsin gene, partial cds. PRGD_OTU025_66fe3e82bf58babef8f3c9d5011113d7, putative proteorhodopsin gene, partial cds. KJ928127 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) ATAATTACAGTTCCATTACAAATGATTGAATTTTACTTAATCTTAGCTGCCTGTACAGCGATTGCTGGCGGAGTGTTTTGGAGATTATTTATAGGATCAATGGTTATGTTAATTGGTGGATATCTTGGTGAAGCCGGTTTTATAAATGTAACTCTTGGATTTGTAATAGGAATGGCTGGTTGGATTTTCATTTTATATGAAATTTTTGCTGGTGAAGCTGGTAAAGTTAATGCAGCTGAAGCGCCGGATTCGGTTAAGACTGCTTTTAACACCATGAAATGGATTGTTACAATT IITVPLQMIEFYLILAACTAIAGGVFWRLFIGSMVMLIGGYLGEAGFINVTLGFVIGMAGWIFILYEIFAGEAGKVNAAEAPDSVKTAFNTMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATTACAGTTCCATTACAAATGATTGAATTTTACTTAATCTTAGCTGCC---------TGT---ACAGCGATTGCTGGC---GGAGTG------------------------------------TTTTGGAGA---TTATTTATAGGATCAATGGTTATGTTAATTGGTGGATATCTTGGTGAA---------GCC------------------GGT------TTT---------------------------------ATA------------------------------------------------------------------AATGTA------------------ACTCTTGGA---TTTGTAATAGGAATGGCTGGTTGGATTTTCATTTTATATGAAATT---------------TTT------GCT---GGTGAAGCTGGTAAAGTTAATGCAGCT------GAA---GCGCCGGATTCGGTT---AAG---ACT---GCT---TTT---AAC---ACCATG---AAATGGATTGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQMIEFYLILAA---C-TAIAG-GV------------FWR-LFIGSMVMLIGGYLGE---A------G--F-----------I----------------------NV------TLG-FVIGMAGWIFILYEI-----F--A-GEAGKVNAA--E-APDSV-K-T-A-F-N-TM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-a]_KJ928130 [IV-Proteo4-a] PRGD_OTU025_d5e260c5aa46ab263618067384713413 gb|KJ928130| PRGD_OTU025_d5e260c5aa46ab263618067384713413, putative proteorhodopsin gene, partial cds. PRGD_OTU025_d5e260c5aa46ab263618067384713413, putative proteorhodopsin gene, partial cds. KJ928130 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) ATAATTACAGTTCCATTACAAATGATTGAATTTTACTTAATCTTAGCTGCTTGTACAGCTATTGCCGGTGGAGTGTTCTGGAGATTATTTATAGGATCAATGGTTATGTTAATCGGTGGATATCTAGGTGAAGCTGGTTTTATAAACGTAACTCTTGGTTTTGTGATAGGAATGGCTGGTTGGATATTCATTCTATATGAGATATTTGCTGGTGAAGCTGGAAAAGTTAATGCAGCTGAAGCTCCGGACTCGGTTAAAACCGCTTTTAACACCATGAAATGGATTGTTACAATT IITVPLQMIEFYLILAACTAIAGGVFWRLFIGSMVMLIGGYLGEAGFINVTLGFVIGMAGWIFILYEIFAGEAGKVNAAEAPDSVKTAFNTMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATTACAGTTCCATTACAAATGATTGAATTTTACTTAATCTTAGCTGCT---------TGT---ACAGCTATTGCCGGT---GGAGTG------------------------------------TTCTGGAGA---TTATTTATAGGATCAATGGTTATGTTAATCGGTGGATATCTAGGTGAA---------GCT------------------GGT------TTT---------------------------------ATA------------------------------------------------------------------AACGTA------------------ACTCTTGGT---TTTGTGATAGGAATGGCTGGTTGGATATTCATTCTATATGAGATA---------------TTT------GCT---GGTGAAGCTGGAAAAGTTAATGCAGCT------GAA---GCTCCGGACTCGGTT---AAA---ACC---GCT---TTT---AAC---ACCATG---AAATGGATTGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQMIEFYLILAA---C-TAIAG-GV------------FWR-LFIGSMVMLIGGYLGE---A------G--F-----------I----------------------NV------TLG-FVIGMAGWIFILYEI-----F--A-GEAGKVNAA--E-APDSV-K-T-A-F-N-TM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-a]_KJ928135 [IV-Proteo4-a] PRGD_OTU025_f1683b5c85aacc875432a34e025b986c gb|KJ928135| PRGD_OTU025_f1683b5c85aacc875432a34e025b986c, putative proteorhodopsin gene, partial cds. PRGD_OTU025_f1683b5c85aacc875432a34e025b986c, putative proteorhodopsin gene, partial cds. KJ928135 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) ATTATTACAGTTCCATTACAAATGATTGAATTCTATCTAATATTAGCTGCTTGTACAGCAATCGCAGGTGGAGTTTTCTGGAGATTATTTGTTGGTTCATTAGTAATGTTAATCGGTGGATATCTTGGTGAAGCTGGTTTTATTAACGCTACACTAGGTTTTGTTATTGGAATGGCTGGTTGGATATTCATTCTTTATGAAATCTTTGCAGGTGAAGCTAGTAAAGTTAATGCAGCCGAGGCTCCAGATTCAGTTAAAACAGCTTATAACACTATGAAATGGATTGTTACTATT IITVPLQMIEFYLILAACTAIAGGVFWRLFVGSLVMLIGGYLGEAGFINATLGFVIGMAGWIFILYEIFAGEASKVNAAEAPDSVKTAYNTMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTATTACAGTTCCATTACAAATGATTGAATTCTATCTAATATTAGCTGCT---------TGT---ACAGCAATCGCAGGT---GGAGTT------------------------------------TTCTGGAGA---TTATTTGTTGGTTCATTAGTAATGTTAATCGGTGGATATCTTGGTGAA---------GCT------------------GGT------TTT---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTAGGT---TTTGTTATTGGAATGGCTGGTTGGATATTCATTCTTTATGAAATC---------------TTT------GCA---GGTGAAGCTAGTAAAGTTAATGCAGCC------GAG---GCTCCAGATTCAGTT---AAA---ACA---GCT---TAT---AAC---ACTATG---AAATGGATTGTTACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQMIEFYLILAA---C-TAIAG-GV------------FWR-LFVGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FVIGMAGWIFILYEI-----F--A-GEASKVNAA--E-APDSV-K-T-A-Y-N-TM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-a]_KJ928124 [IV-Proteo4-a] PRGD_OTU025_48b77b9ab775e85527ea2099ae33c4bc gb|KJ928124| PRGD_OTU025_48b77b9ab775e85527ea2099ae33c4bc, putative proteorhodopsin gene, partial cds. PRGD_OTU025_48b77b9ab775e85527ea2099ae33c4bc, putative proteorhodopsin gene, partial cds. KJ928124 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTATTACAGTTCCATTACAAATGATTGAATTCTACCTAATTTTAGCTGCTTGTACTGCCATTGCTGGTGGTGTCTTCTGGAGATTATTCGTTGGATCATTAGTGATGTTAATTGGTGGATATCTTGGTGAAGCAGGTTTCATTAACGCAACATTAGGTTTTGTCATTGGTATGGCTGGTTGGATATTCATTCTTTATGAAATCTTTGCTGGTGAAGCAAGTAAAGTTAATGCTGCTGAAGCTCCAGACTCTGTTAAAACAGCTTACAACACCATGAAATGGATTGTAACTATT IITVPLQMIEFYLILAACTAIAGGVFWRLFVGSLVMLIGGYLGEAGFINATLGFVIGMAGWIFILYEIFAGEASKVNAAEAPDSVKTAYNTMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTATTACAGTTCCATTACAAATGATTGAATTCTACCTAATTTTAGCTGCT---------TGT---ACTGCCATTGCTGGT---GGTGTC------------------------------------TTCTGGAGA---TTATTCGTTGGATCATTAGTGATGTTAATTGGTGGATATCTTGGTGAA---------GCA------------------GGT------TTC---------------------------------ATT------------------------------------------------------------------AACGCA------------------ACATTAGGT---TTTGTCATTGGTATGGCTGGTTGGATATTCATTCTTTATGAAATC---------------TTT------GCT---GGTGAAGCAAGTAAAGTTAATGCTGCT------GAA---GCTCCAGACTCTGTT---AAA---ACA---GCT---TAC---AAC---ACCATG---AAATGGATTGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQMIEFYLILAA---C-TAIAG-GV------------FWR-LFVGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FVIGMAGWIFILYEI-----F--A-GEASKVNAA--E-APDSV-K-T-A-Y-N-TM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-a]_KJ928131 [IV-Proteo4-a] PRGD_OTU025_dccf115fc4717d61900607181807a004 gb|KJ928131| PRGD_OTU025_dccf115fc4717d61900607181807a004, putative proteorhodopsin gene, partial cds. PRGD_OTU025_dccf115fc4717d61900607181807a004, putative proteorhodopsin gene, partial cds. KJ928131 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) ATTATTACAGTTCCATTACAAATGATTGAATTCTACCTAATTTTAGCTGCTTGTACTGCCATTGCTGGTGGTGTCTTCTGGAGATTATTTGTTGGATCATTAGTGATGTTAATCGGTGGATATCTTGGTGAAGCAGGTTTCATTAACGCAACGTTAGGTTTTGTTATTGGTATGGCTGGTTGGATATTCATTCTTTATGAAATCTTTGCTGGTGAAGCAAGTAAAGTTAATGCTGCTGAAGCTCCAGACTCTGTTAAAACAGCTTACAACACCATGGAATGGATTGTGACTATT IITVPLQMIEFYLILAACTAIAGGVFWRLFVGSLVMLIGGYLGEAGFINATLGFVIGMAGWIFILYEIFAGEASKVNAAEAPDSVKTAYNTMEWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTATTACAGTTCCATTACAAATGATTGAATTCTACCTAATTTTAGCTGCT---------TGT---ACTGCCATTGCTGGT---GGTGTC------------------------------------TTCTGGAGA---TTATTTGTTGGATCATTAGTGATGTTAATCGGTGGATATCTTGGTGAA---------GCA------------------GGT------TTC---------------------------------ATT------------------------------------------------------------------AACGCA------------------ACGTTAGGT---TTTGTTATTGGTATGGCTGGTTGGATATTCATTCTTTATGAAATC---------------TTT------GCT---GGTGAAGCAAGTAAAGTTAATGCTGCT------GAA---GCTCCAGACTCTGTT---AAA---ACA---GCT---TAC---AAC---ACCATG---GAATGGATTGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQMIEFYLILAA---C-TAIAG-GV------------FWR-LFVGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FVIGMAGWIFILYEI-----F--A-GEASKVNAA--E-APDSV-K-T-A-Y-N-TM-EWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-a]_KJ928121 [IV-Proteo4-a] PRGD_OTU025_09bd67f457111c4529fa7c61353e3146 gb|KJ928121| PRGD_OTU025_09bd67f457111c4529fa7c61353e3146, putative proteorhodopsin gene, partial cds. PRGD_OTU025_09bd67f457111c4529fa7c61353e3146, putative proteorhodopsin gene, partial cds. KJ928121 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419) ATTATTACAGTTCCATTACAAATGATTGAATTTTACCTAATTTTAGCTGCTTGTACTGCCATTGCTGGTGGTGTCTTCTGGAGATTATTTGTTGGATCATTAGTGATGTTAATCGGTGGATATCTTGGTGAAGCAGGTTTCATTAACGCAACATTAGGTTTTGTTATTGGTATGGCTGGTTGGATATTCATTCTTTATGAAATCTTTGCTGGTGAAGCAAGTAAAGTTAATGCTGCTGAAGCTCCAGACTCTGTTAAAACAGCTTACAACACCATGAAATGGATTGTAACTATT IITVPLQMIEFYLILAACTAIAGGVFWRLFVGSLVMLIGGYLGEAGFINATLGFVIGMAGWIFILYEIFAGEASKVNAAEAPDSVKTAYNTMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTATTACAGTTCCATTACAAATGATTGAATTTTACCTAATTTTAGCTGCT---------TGT---ACTGCCATTGCTGGT---GGTGTC------------------------------------TTCTGGAGA---TTATTTGTTGGATCATTAGTGATGTTAATCGGTGGATATCTTGGTGAA---------GCA------------------GGT------TTC---------------------------------ATT------------------------------------------------------------------AACGCA------------------ACATTAGGT---TTTGTTATTGGTATGGCTGGTTGGATATTCATTCTTTATGAAATC---------------TTT------GCT---GGTGAAGCAAGTAAAGTTAATGCTGCT------GAA---GCTCCAGACTCTGTT---AAA---ACA---GCT---TAC---AAC---ACCATG---AAATGGATTGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQMIEFYLILAA---C-TAIAG-GV------------FWR-LFVGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FVIGMAGWIFILYEI-----F--A-GEASKVNAA--E-APDSV-K-T-A-Y-N-TM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-a]_KJ928128 [IV-Proteo4-a] PRGD_OTU025_6cbf54e541c2262f7f1b15d7293ae8c7 gb|KJ928128| PRGD_OTU025_6cbf54e541c2262f7f1b15d7293ae8c7, putative proteorhodopsin gene, partial cds. PRGD_OTU025_6cbf54e541c2262f7f1b15d7293ae8c7, putative proteorhodopsin gene, partial cds. KJ928128 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) ATTATTACAGTTCCATTACAAATGATTGAATTTTATCTAATTTTAGCTGCTTGTACTGCCATTGCTGGTGGTGTCTTCTGGAGATTATTTGTTGGTTCATTAGTAATGTTAATCGGTGGATATCTTGGTGAAGCAGGTTTCATTAACGCAACATTAGGTTTTGTTATAGGTATGGCTGGTTGGATATTCATTCTTTATGAAATTTTTGCTGGTGAAGCAAGTAAAGTTAATGCTGCTGAAGCTCCAGACTCTGTTAAAACAGCTTACAACACCATGAAATGGATTGTGACTATT IITVPLQMIEFYLILAACTAIAGGVFWRLFVGSLVMLIGGYLGEAGFINATLGFVIGMAGWIFILYEIFAGEASKVNAAEAPDSVKTAYNTMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTATTACAGTTCCATTACAAATGATTGAATTTTATCTAATTTTAGCTGCT---------TGT---ACTGCCATTGCTGGT---GGTGTC------------------------------------TTCTGGAGA---TTATTTGTTGGTTCATTAGTAATGTTAATCGGTGGATATCTTGGTGAA---------GCA------------------GGT------TTC---------------------------------ATT------------------------------------------------------------------AACGCA------------------ACATTAGGT---TTTGTTATAGGTATGGCTGGTTGGATATTCATTCTTTATGAAATT---------------TTT------GCT---GGTGAAGCAAGTAAAGTTAATGCTGCT------GAA---GCTCCAGACTCTGTT---AAA---ACA---GCT---TAC---AAC---ACCATG---AAATGGATTGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQMIEFYLILAA---C-TAIAG-GV------------FWR-LFVGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FVIGMAGWIFILYEI-----F--A-GEASKVNAA--E-APDSV-K-T-A-Y-N-TM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-a]_KJ928134 [IV-Proteo4-a] PRGD_OTU025_eb1bf943e6c3f2c31f2a8a0078d55aa8 gb|KJ928134| PRGD_OTU025_eb1bf943e6c3f2c31f2a8a0078d55aa8, putative proteorhodopsin gene, partial cds. PRGD_OTU025_eb1bf943e6c3f2c31f2a8a0078d55aa8, putative proteorhodopsin gene, partial cds. KJ928134 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), North Pacific Ocean (50.06, -139.53), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) ATTGTAACAGTTCCATTACAGATGGTTGAATTTTACTTAATCTTAGCCGCTTGTACTGTTGTTGCAGGTGGAGTTTTCTGGAGATTGTTAGTAGGAACTCTAGTAATGGTTATTGGTGGATATCTTGGAGAAGCAGGATACATCAACGCAACATTAGGTTTTGTTATAGGTATGGCTGGATGGATATTCATTTTATATGAAATCTTTGCAGGAGAAGCTAGCAAAATTAGCGCAGAAAGTGCTCCAGAATCTGTTCAGACAGCTTTTAACACAATGAGATGGATTGTAACAATC IVTVPLQMVEFYLILAACTVVAGGVFWRLLVGTLVMVIGGYLGEAGYINATLGFVIGMAGWIFILYEIFAGEASKISAESAPESVQTAFNTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGTAACAGTTCCATTACAGATGGTTGAATTTTACTTAATCTTAGCCGCT---------TGT---ACTGTTGTTGCAGGT---GGAGTT------------------------------------TTCTGGAGA---TTGTTAGTAGGAACTCTAGTAATGGTTATTGGTGGATATCTTGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCA------------------ACATTAGGT---TTTGTTATAGGTATGGCTGGATGGATATTCATTTTATATGAAATC---------------TTT------GCA---GGAGAAGCTAGCAAAATTAGCGCAGAA------AGT---GCTCCAGAATCTGTT---CAG---ACA---GCT---TTT---AAC---ACAATG---AGATGGATTGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVTVPLQMVEFYLILAA---C-TVVAG-GV------------FWR-LLVGTLVMVIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIFILYEI-----F--A-GEASKISAE--S-APESV-Q-T-A-F-N-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-a]_KJ928122 [IV-Proteo4-a] PRGD_OTU025_22beaae96866ed635e16d47d1bacd51f gb|KJ928122| PRGD_OTU025_22beaae96866ed635e16d47d1bacd51f, putative proteorhodopsin gene, partial cds. PRGD_OTU025_22beaae96866ed635e16d47d1bacd51f, putative proteorhodopsin gene, partial cds. KJ928122 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), English Channel (48.7717, -3.9683) ATTGTAACAGTTCCATTACAGATGGTTGAGTTTTACTTAATCTTAGCTGCTTGTACTGTAGTTGCAGGTGGAGTTTTCTGGAGATTGTTAGTAGGAACTTTAGTAATGGTTATTGGTGGATATCTTGGAGAAGCAGGATACATCAATGCAACATTAGGTTTTGTTATAGGTATGGCTGGATGGATATTCATTTTATATGAAATCTTTGCAGGAGAAGCTAGCAAGATTAGTGCAGAAAGCGCTCCAGCATCAGTTCAGACAGCTTTTAATACAATGCGATGGATTGTAACAATC IVTVPLQMVEFYLILAACTVVAGGVFWRLLVGTLVMVIGGYLGEAGYINATLGFVIGMAGWIFILYEIFAGEASKISAESAPASVQTAFNTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGTAACAGTTCCATTACAGATGGTTGAGTTTTACTTAATCTTAGCTGCT---------TGT---ACTGTAGTTGCAGGT---GGAGTT------------------------------------TTCTGGAGA---TTGTTAGTAGGAACTTTAGTAATGGTTATTGGTGGATATCTTGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGCA------------------ACATTAGGT---TTTGTTATAGGTATGGCTGGATGGATATTCATTTTATATGAAATC---------------TTT------GCA---GGAGAAGCTAGCAAGATTAGTGCAGAA------AGC---GCTCCAGCATCAGTT---CAG---ACA---GCT---TTT---AAT---ACAATG---CGATGGATTGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVTVPLQMVEFYLILAA---C-TVVAG-GV------------FWR-LLVGTLVMVIGGYLGE---A------G--Y-----------I----------------------NA------TLG-FVIGMAGWIFILYEI-----F--A-GEASKISAE--S-APASV-Q-T-A-F-N-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-a]_KJ929599 [IV-Proteo4-a] PRGD_OTU165_otuREP_7f039fea98e38e16da9bb21dcc1a90e1 gb|KJ929599| PRGD_OTU165_otuREP_7f039fea98e38e16da9bb21dcc1a90e1, putative proteorhodopsin gene, partial cds. PRGD_OTU165_otuREP_7f039fea98e38e16da9bb21dcc1a90e1, putative proteorhodopsin gene, partial cds. KJ929599 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) ATTGTAACTGTTCCATTACAGATGGTTGAGTTCTATCTTATTCTTGCTGCCGTTACTGCAGTTTCTATGGGAGTCTTTTGGAGACTATTAATAGGTACTGTTGTTATGGTTGTGGCAGGTTACATGGGTGAAGCTGGTTTTATAAACACAACAATTGGTTTTGTTGTAGGTATGGCTGGTTGGGCTTATATTCTGTATGAGATCTTCTCTGGAGAAGCAAGTAAAAGTGCTGCAAATGCTAAACCTTCGGTTCAGTCAGCTTTCAATACAATGAAATGGATTGTTACTATA IVTVPLQMVEFYLILAAVTAVSMGVFWRLLIGTVVMVVAGYMGEAGFINTTIGFVVGMAGWAYILYEIFSGEASKSAANAKPSVQSAFNTMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGTAACTGTTCCATTACAGATGGTTGAGTTCTATCTTATTCTTGCTGCC---------GTT---ACTGCAGTTTCTATG---GGAGTC------------------------------------TTTTGGAGA---CTATTAATAGGTACTGTTGTTATGGTTGTGGCAGGTTACATGGGTGAA---------GCT------------------GGT------TTT---------------------------------ATA------------------------------------------------------------------AACACA------------------ACAATTGGT---TTTGTTGTAGGTATGGCTGGTTGGGCTTATATTCTGTATGAGATC---------------TTC------TCT---GGAGAAGCAAGTAAAAGTGCTGCA---------AAT---GCTAAACCTTCGGTT---CAG---TCA---GCT---TTC---AAT---ACAATG---AAATGGATTGTTACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVTVPLQMVEFYLILAA---V-TAVSM-GV------------FWR-LLIGTVVMVVAGYMGE---A------G--F-----------I----------------------NT------TIG-FVVGMAGWAYILYEI-----F--S-GEASKSAA---N-AKPSV-Q-S-A-F-N-TM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-a]_KJ929600 [IV-Proteo4-a] PRGD_OTU165_2dff04a531f4db081b4643ec823df6fd gb|KJ929600| PRGD_OTU165_2dff04a531f4db081b4643ec823df6fd, putative proteorhodopsin gene, partial cds. PRGD_OTU165_2dff04a531f4db081b4643ec823df6fd, putative proteorhodopsin gene, partial cds. KJ929600 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) ATTGTAACTGTTCCATTACAGATGGTTGAGTTCTATCTTATTCTTGCTGCTGTTACTGCGGTTTCTATGGGAGTCTTTTGGAGACTATTAATAGGTACTGTTGTCATGGTTGTTGCAGGTTATATGGGTGAAGCTGGTTTTATTAATACAACAATTGGTTTTGTTGTAGGTATGGCTGGTTGGGCTTATATTCTGTATGAGATTTTCTCTGGAGAAGCAAGTAAAAGTGCTGCAAATGCTAAACCTTCAGTTCAGTCAGCTTTCAATACAATGAAATGGATTGTTACTATA IVTVPLQMVEFYLILAAVTAVSMGVFWRLLIGTVVMVVAGYMGEAGFINTTIGFVVGMAGWAYILYEIFSGEASKSAANAKPSVQSAFNTMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGTAACTGTTCCATTACAGATGGTTGAGTTCTATCTTATTCTTGCTGCT---------GTT---ACTGCGGTTTCTATG---GGAGTC------------------------------------TTTTGGAGA---CTATTAATAGGTACTGTTGTCATGGTTGTTGCAGGTTATATGGGTGAA---------GCT------------------GGT------TTT---------------------------------ATT------------------------------------------------------------------AATACA------------------ACAATTGGT---TTTGTTGTAGGTATGGCTGGTTGGGCTTATATTCTGTATGAGATT---------------TTC------TCT---GGAGAAGCAAGTAAAAGTGCTGCA---------AAT---GCTAAACCTTCAGTT---CAG---TCA---GCT---TTC---AAT---ACAATG---AAATGGATTGTTACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVTVPLQMVEFYLILAA---V-TAVSM-GV------------FWR-LLIGTVVMVVAGYMGE---A------G--F-----------I----------------------NT------TIG-FVVGMAGWAYILYEI-----F--S-GEASKSAA---N-AKPSV-Q-S-A-F-N-TM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo4-a]_KJ929601 [IV-Proteo4-a] PRGD_OTU165_77fd815df651be88ed1816fccd3f1ae5 gb|KJ929601| PRGD_OTU165_77fd815df651be88ed1816fccd3f1ae5, putative proteorhodopsin gene, partial cds. PRGD_OTU165_77fd815df651be88ed1816fccd3f1ae5, putative proteorhodopsin gene, partial cds. KJ929601 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTGTAACCGTTCCACTTCAAATGGTTGAATTCTATCTCATATTAGCTGCTGTTACAGCTGTATCACTTGGTGTCTTCTGGAGACTTCTAATCGGTACTGTTGTTATGGTTGTTGCAGGTTATTTAGGCGAAGCTGGCTTCATTGATACAACAATTGGTTTTGTTGTAGGAATGGGTGGTTGGGCTTATATCCTGTATGAGATCTTCTCAGGCGAAGCAAGTGCTAGTGCTTCTAAAGCTGCACCTGCTGTTCAATCCGCATTTAATACAATGAAATGGATTGTAACCATT IVTVPLQMVEFYLILAAVTAVSLGVFWRLLIGTVVMVVAGYLGEAGFIDTTIGFVVGMGGWAYILYEIFSGEASASASKAAPAVQSAFNTMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGTAACCGTTCCACTTCAAATGGTTGAATTCTATCTCATATTAGCTGCT---------GTT---ACAGCTGTATCACTT---GGTGTC------------------------------------TTCTGGAGA---CTTCTAATCGGTACTGTTGTTATGGTTGTTGCAGGTTATTTAGGCGAA---------GCT------------------GGC------TTC---------------------------------ATT------------------------------------------------------------------GATACA------------------ACAATTGGT---TTTGTTGTAGGAATGGGTGGTTGGGCTTATATCCTGTATGAGATC---------------TTC------TCA---GGCGAAGCAAGTGCT---AGTGCTTCT------AAA---GCTGCACCTGCTGTT---CAA---TCC---GCA---TTT---AAT---ACAATG---AAATGGATTGTAACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVTVPLQMVEFYLILAA---V-TAVSL-GV------------FWR-LLIGTVVMVVAGYLGE---A------G--F-----------I----------------------DT------TIG-FVVGMGGWAYILYEI-----F--S-GEASA-SAS--K-AAPAV-Q-S-A-F-N-TM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926782 [IV-Alpha7-HOT2C01] PRGD_OTU003_169d68b65cf4ac7b61f043af8abb3039 gb|KJ926782| PRGD_OTU003_169d68b65cf4ac7b61f043af8abb3039, putative proteorhodopsin gene, partial cds. PRGD_OTU003_169d68b65cf4ac7b61f043af8abb3039, putative proteorhodopsin gene, partial cds. KJ926782 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCAGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGATTATTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACACTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCATTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCAGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---TTATTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCATTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926795 [IV-Alpha7-HOT2C01] PRGD_OTU003_2fd110b7959e92575a89448c70faaa83 gb|KJ926795| PRGD_OTU003_2fd110b7959e92575a89448c70faaa83, putative proteorhodopsin gene, partial cds. PRGD_OTU003_2fd110b7959e92575a89448c70faaa83, putative proteorhodopsin gene, partial cds. KJ926795 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683), Indian Ocean (-33.28, 45.35) TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTTTGGAGATTATTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACACTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAATGCATTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTTTGGAGA---TTATTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAT---GCATTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926785 [IV-Alpha7-HOT2C01] PRGD_OTU003_1f5b0d56768fdde122679036e3012af4 gb|KJ926785| PRGD_OTU003_1f5b0d56768fdde122679036e3012af4, putative proteorhodopsin gene, partial cds. PRGD_OTU003_1f5b0d56768fdde122679036e3012af4, putative proteorhodopsin gene, partial cds. KJ926785 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACACTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCATTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCATTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926852 [IV-Alpha7-HOT2C01] PRGD_OTU003_9c4c6ecf68beac4798395086be33dcea gb|KJ926852| PRGD_OTU003_9c4c6ecf68beac4798395086be33dcea, putative proteorhodopsin gene, partial cds. PRGD_OTU003_9c4c6ecf68beac4798395086be33dcea, putative proteorhodopsin gene, partial cds. KJ926852 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTGGGTGAAGTCGGGGCGATGAATGTAACACTAGCCTTCGTAATTGGAATGGCTGGATGGTTATATATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCATTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTGGGTGAA---------GTC------------------GGG------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTAGCC---TTCGTAATTGGAATGGCTGGATGGTTATATATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCATTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926817 [IV-Alpha7-HOT2C01] PRGD_OTU003_5f246c056237d449a1dae8570f3640c0 gb|KJ926817| PRGD_OTU003_5f246c056237d449a1dae8570f3640c0, putative proteorhodopsin gene, partial cds. PRGD_OTU003_5f246c056237d449a1dae8570f3640c0, putative proteorhodopsin gene, partial cds. KJ926817 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-23.5956, 69.0419) TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATCGCATCAATTGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACACTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCGAGCGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCATTTAACGCGTTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATCGCATCAATTGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCGAGCGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCA---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926904 [IV-Alpha7-HOT2C01] PRGD_OTU003_df2e816aa697ee9430e92b8009eb9c14 gb|KJ926904| PRGD_OTU003_df2e816aa697ee9430e92b8009eb9c14, putative proteorhodopsin gene, partial cds. PRGD_OTU003_df2e816aa697ee9430e92b8009eb9c14, putative proteorhodopsin gene, partial cds. KJ926904 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACTGTACCTCTGCAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACACTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCATTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTACCTCTGCAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCATTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926810 [IV-Alpha7-HOT2C01] PRGD_OTU003_4aaf8a5715dfac44e3cb176286edbb3a gb|KJ926810| PRGD_OTU003_4aaf8a5715dfac44e3cb176286edbb3a, putative proteorhodopsin gene, partial cds. PRGD_OTU003_4aaf8a5715dfac44e3cb176286edbb3a, putative proteorhodopsin gene, partial cds. KJ926810 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -33.9602, -73.3769), Mediterranean Sea (38.6308, 7.9097) TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACACTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTACGAAATTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCTTTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTACGAAATT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCTTTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926836 [IV-Alpha7-HOT2C01] PRGD_OTU003_7eddef4890df5e18d768c99e76b9f459 gb|KJ926836| PRGD_OTU003_7eddef4890df5e18d768c99e76b9f459, putative proteorhodopsin gene, partial cds. PRGD_OTU003_7eddef4890df5e18d768c99e76b9f459, putative proteorhodopsin gene, partial cds. KJ926836 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Mediterranean Sea (33.935, 18.508), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTCAACGCATTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTC---AAC---GCATTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926917 [IV-Alpha7-HOT2C01] PRGD_OTU003_f190e2e90c965a2413178a043ec8a2f9 gb|KJ926917| PRGD_OTU003_f190e2e90c965a2413178a043ec8a2f9, putative proteorhodopsin gene, partial cds. PRGD_OTU003_f190e2e90c965a2413178a043ec8a2f9, putative proteorhodopsin gene, partial cds. KJ926917 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATTTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTTGTAATAGGAATGGCTGGATGGCTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCATTGAGATTAATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATTTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTTGTAATAGGAATGGCTGGATGGCTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCATTG---AGATTAATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926888 [IV-Alpha7-HOT2C01] PRGD_OTU003_c9da5fcbc07e457cb0877404e60243bf gb|KJ926888| PRGD_OTU003_c9da5fcbc07e457cb0877404e60243bf, putative proteorhodopsin gene, partial cds. PRGD_OTU003_c9da5fcbc07e457cb0877404e60243bf, putative proteorhodopsin gene, partial cds. KJ926888 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATTGTGATGTTGGTTGGTGGCTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTACGAAATTTTTGCAGGAGAAGCAAGCAAGGCGAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTGTGATGTTGGTTGGTGGCTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTACGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCGAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926894 [IV-Alpha7-HOT2C01] PRGD_OTU003_d3ff7ca1e4770a484c1d9d8d3a7be58e gb|KJ926894| PRGD_OTU003_d3ff7ca1e4770a484c1d9d8d3a7be58e, putative proteorhodopsin gene, partial cds. PRGD_OTU003_d3ff7ca1e4770a484c1d9d8d3a7be58e, putative proteorhodopsin gene, partial cds. KJ926894 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATCGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTACGAAATTTTTGCAGGAGAAGCAAGCAAGGCGAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCGTTTAACGCATTGAGATTAATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATCGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTACGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCGAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCG---TTT---AAC---GCATTG---AGATTAATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926798 [IV-Alpha7-HOT2C01] PRGD_OTU003_33ed986929bfc28fa4bd4a8a19e8a509 gb|KJ926798| PRGD_OTU003_33ed986929bfc28fa4bd4a8a19e8a509, putative proteorhodopsin gene, partial cds. PRGD_OTU003_33ed986929bfc28fa4bd4a8a19e8a509, putative proteorhodopsin gene, partial cds. KJ926798 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Indian Ocean (-33.28, 45.35) TTGATTACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATCGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTACGAAATTTTTGCAGGAGAAGCAAGCAAGGCGAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATCGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTACGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCGAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926780 [IV-Alpha7-HOT2C01] PRGD_OTU003_14e8a5801c12b73fcc3704a69b370de8 gb|KJ926780| PRGD_OTU003_14e8a5801c12b73fcc3704a69b370de8, putative proteorhodopsin gene, partial cds. PRGD_OTU003_14e8a5801c12b73fcc3704a69b370de8, putative proteorhodopsin gene, partial cds. KJ926780 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Indian Ocean (-23.5956, 69.0419) TTGATTACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTAGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAATGCTGCTGGTCAAGCTGCGTTTAACGCATTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTAGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAATGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCATTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926809 [IV-Alpha7-HOT2C01] PRGD_OTU003_46644017659e725b72d60d12540e0285 gb|KJ926809| PRGD_OTU003_46644017659e725b72d60d12540e0285, putative proteorhodopsin gene, partial cds. PRGD_OTU003_46644017659e725b72d60d12540e0285, putative proteorhodopsin gene, partial cds. KJ926809 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-33.28, 45.35) TTGATTACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTAGTTGGTGGTTATCTCGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCCGGATGGTTATATATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCATTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTAGTTGGTGGTTATCTCGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCCGGATGGTTATATATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCATTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926823 [IV-Alpha7-HOT2C01] PRGD_OTU003_66d28e391b97e0915c0476c076540de2 gb|KJ926823| PRGD_OTU003_66d28e391b97e0915c0476c076540de2, putative proteorhodopsin gene, partial cds. PRGD_OTU003_66d28e391b97e0915c0476c076540de2, putative proteorhodopsin gene, partial cds. KJ926823 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTAATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCCGGTCAAGCTGCATTTAACGCGTTGCGATTAATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTAATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCCGGT---CAA---GCT---GCA---TTT---AAC---GCGTTG---CGATTAATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926771 [IV-Alpha7-HOT2C01] PRGD_OTU003_otuREP_ee99a0127dcfdd80cb48da696d84f4da gb|KJ926771| PRGD_OTU003_otuREP_ee99a0127dcfdd80cb48da696d84f4da, putative proteorhodopsin gene, partial cds. PRGD_OTU003_otuREP_ee99a0127dcfdd80cb48da696d84f4da, putative proteorhodopsin gene, partial cds. KJ926771 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926784 [IV-Alpha7-HOT2C01] PRGD_OTU003_1f19b96380c6d2ab897729a11a7438f7 gb|KJ926784| PRGD_OTU003_1f19b96380c6d2ab897729a11a7438f7, putative proteorhodopsin gene, partial cds. PRGD_OTU003_1f19b96380c6d2ab897729a11a7438f7, putative proteorhodopsin gene, partial cds. KJ926784 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) TTAATCACTGTGCCATTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCCTCAGGCTTATTCTGGAGACTGTTAATCGCATCAATCGTGATGTTGGTTGGTGGTTATCTAGGTGAAATTGGAGCGATGAATGTAGGTCTAGCTTTCGCTATAGGAATGGCAGGATGGATATACATCATCTACGAGGTTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGCAGCGGAAATGCTGCTGGTCAAACAGCATTTAATGCATTGAGATTAATTGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEIGAMNVGLAFAIGMAGWIYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCATTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCCTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCAATCGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------ATT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------GGTCTAGCT---TTCGCTATAGGAATGGCAGGATGGATATACATCATCTACGAGGTT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGC------AGC---GGAAATGCTGCTGGT---CAA---ACA---GCA---TTT---AAT---GCATTG---AGATTAATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---I------G--A-----------M----------------------NV------GLA-FAIGMAGWIYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926912 [IV-Alpha7-HOT2C01] PRGD_OTU003_e76944b0e2c0cd3c42d9288c825081c0 gb|KJ926912| PRGD_OTU003_e76944b0e2c0cd3c42d9288c825081c0, putative proteorhodopsin gene, partial cds. PRGD_OTU003_e76944b0e2c0cd3c42d9288c825081c0, putative proteorhodopsin gene, partial cds. KJ926912 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTGATCACTGTGCCATTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCCTCAGGTTTATTCTGGAGACTATTGATCGCATCAATCGTGATGTTGGTTGGTGGTTATCTGGGTGAAATTGGAGCGATGAACGTAGGTCTAGCCTTCGCTATAGGAATGGCAGGATGGATATACATCATCTACGAGGTTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGCAGCGGAAATGCTGCTGGTCAAACAGCATTTAATGCATTGAGATTAATTGTTACAGTG LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEIGAMNVGLAFAIGMAGWIYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCATTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCCTCA---GGTTTA------------------------------------TTCTGGAGA---CTATTGATCGCATCAATCGTGATGTTGGTTGGTGGTTATCTGGGTGAA---------ATT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AACGTA------------------GGTCTAGCC---TTCGCTATAGGAATGGCAGGATGGATATACATCATCTACGAGGTT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGC------AGC---GGAAATGCTGCTGGT---CAA---ACA---GCA---TTT---AAT---GCATTG---AGATTAATTGTTACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---I------G--A-----------M----------------------NV------GLA-FAIGMAGWIYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926875 [IV-Alpha7-HOT2C01] PRGD_OTU003_ba62ceff70e1830f4348736cadb11458 gb|KJ926875| PRGD_OTU003_ba62ceff70e1830f4348736cadb11458, putative proteorhodopsin gene, partial cds. PRGD_OTU003_ba62ceff70e1830f4348736cadb11458, putative proteorhodopsin gene, partial cds. KJ926875 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) TTGATCACGGTGCCTTTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGTTTATTCTGGAGATTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTGGGTGAAATTGGAGCGATGAACGTAGGTCTAGCCTTCGCTATAGGAATGGCTGGATGGCTTTATATCATCTACGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAACAGCATTTAATGCATTGAGATTAATTGTTACAGTC LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEIGAMNVGLAFAIGMAGWLYIIYEIFAGEASKASAGSGNAAGQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACGGTGCCTTTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGTTTA------------------------------------TTCTGGAGA---TTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTGGGTGAA---------ATT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AACGTA------------------GGTCTAGCC---TTCGCTATAGGAATGGCTGGATGGCTTTATATCATCTACGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---ACA---GCA---TTT---AAT---GCATTG---AGATTAATTGTTACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---I------G--A-----------M----------------------NV------GLA-FAIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926920 [IV-Alpha7-HOT2C01] PRGD_OTU003_fae2798e19736463f50bc2faf3b79c8a gb|KJ926920| PRGD_OTU003_fae2798e19736463f50bc2faf3b79c8a, putative proteorhodopsin gene, partial cds. PRGD_OTU003_fae2798e19736463f50bc2faf3b79c8a, putative proteorhodopsin gene, partial cds. KJ926920 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) TTGATCACGGTGCCTTTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAATTGGAGCGATGAACGTAGGTCTAGCCTTTGCTATAGGAATGGCTGGATGGCTTTATATCATCTACGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAACAGCATTTAATGCATTGAGATTAATTGTTACAGTC LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEIGAMNVGLAFAIGMAGWLYIIYEIFAGEASKASAGSGNAAGQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACGGTGCCTTTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------ATT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AACGTA------------------GGTCTAGCC---TTTGCTATAGGAATGGCTGGATGGCTTTATATCATCTACGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---ACA---GCA---TTT---AAT---GCATTG---AGATTAATTGTTACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---I------G--A-----------M----------------------NV------GLA-FAIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926907 [IV-Alpha7-HOT2C01] PRGD_OTU003_e370b612c00161f655076e7aa0972072 gb|KJ926907| PRGD_OTU003_e370b612c00161f655076e7aa0972072, putative proteorhodopsin gene, partial cds. PRGD_OTU003_e370b612c00161f655076e7aa0972072, putative proteorhodopsin gene, partial cds. KJ926907 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) TTGATCACGGTGCCTTTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAATTGGAGCGATGAACGTAGGTCTAGCCTTCGCTATAGGAATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAACAGCATTTAATGCATTGAGATTAATTGTTACAGTC LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEIGAMNVGLAFAIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACGGTGCCTTTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------ATT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AACGTA------------------GGTCTAGCC---TTCGCTATAGGAATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---ACA---GCA---TTT---AAT---GCATTG---AGATTAATTGTTACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---I------G--A-----------M----------------------NV------GLA-FAIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926870 [IV-Alpha7-HOT2C01] PRGD_OTU003_b33a4c4588ad0c29cb3259e4d6c505c8 gb|KJ926870| PRGD_OTU003_b33a4c4588ad0c29cb3259e4d6c505c8, putative proteorhodopsin gene, partial cds. PRGD_OTU003_b33a4c4588ad0c29cb3259e4d6c505c8, putative proteorhodopsin gene, partial cds. KJ926870 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) TTGATCACGGTGCCATTACAAATTGTAGAGTTCTACGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAAGCTTATTCTGGAGACTGTTAATCGCATCGATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAATTGGAGCGATGAACGTAGGTCTAGCCTTCGCTATAGGAATGGCTGGATGGCTTTATATCATCTACGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAACAGCATTTAATGCATTGAGATTAATTGTTACAGTC LITVPLQIVEFYVILAAMTAVASSLFWRLLIASIVMLVGGYLGEIGAMNVGLAFAIGMAGWLYIIYEIFAGEASKASAGSGNAAGQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACGGTGCCATTACAAATTGTAGAGTTCTACGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---AGCTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCGATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------ATT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AACGTA------------------GGTCTAGCC---TTCGCTATAGGAATGGCTGGATGGCTTTATATCATCTACGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---ACA---GCA---TTT---AAT---GCATTG---AGATTAATTGTTACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIVMLVGGYLGE---I------G--A-----------M----------------------NV------GLA-FAIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926827 [IV-Alpha7-HOT2C01] PRGD_OTU003_6c1c2ee53baa07bb4893fc26c9b7ea16 gb|KJ926827| PRGD_OTU003_6c1c2ee53baa07bb4893fc26c9b7ea16, putative proteorhodopsin gene, partial cds. PRGD_OTU003_6c1c2ee53baa07bb4893fc26c9b7ea16, putative proteorhodopsin gene, partial cds. KJ926827 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-33.28, 45.35) TTGATCACGGTACCATTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCTATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTGGGTGAAATTGGAGCGATGAACGTAGGTCTAGCCTTCGCTATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGTAAGGCAAGTGCTGGCAGTGGAAACGCTGCTGGTCAAACAGCATTTAATGCATTGAGATTAATTGTTACAGTC LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEIGAMNVGLAFAIGMAGWLYIIYEIFAGEASKASAGSGNAAGQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACGGTACCATTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCT---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTGGGTGAA---------ATT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AACGTA------------------GGTCTAGCC---TTCGCTATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGTAAGGCAAGTGCTGGC------AGT---GGAAACGCTGCTGGT---CAA---ACA---GCA---TTT---AAT---GCATTG---AGATTAATTGTTACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---I------G--A-----------M----------------------NV------GLA-FAIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926837 [IV-Alpha7-HOT2C01] PRGD_OTU003_811fb919cf89e56a73748a2db5746031 gb|KJ926837| PRGD_OTU003_811fb919cf89e56a73748a2db5746031, putative proteorhodopsin gene, partial cds. PRGD_OTU003_811fb919cf89e56a73748a2db5746031, putative proteorhodopsin gene, partial cds. KJ926837 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) TTGATCACTGTGCCTCTACAAATTGTAGAATTTTATGTAATTCTTGCAGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTAATCGCATCGATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAATTGGAGCGATGAACGTAGGTCTAGCCTTCGCTATAGGAATGGCTGGATGGCTTTATATCATCTACGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAATGCTGCTGGTCAAGCTGCGTTTAACGCATTGAGATTAATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEIGAMNVGLAFAIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAATTTTATGTAATTCTTGCAGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCGATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------ATT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AACGTA------------------GGTCTAGCC---TTCGCTATAGGAATGGCTGGATGGCTTTATATCATCTACGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAATGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCATTG---AGATTAATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---I------G--A-----------M----------------------NV------GLA-FAIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926892 [IV-Alpha7-HOT2C01] PRGD_OTU003_d1254a50c0b69b09987630602da156d7 gb|KJ926892| PRGD_OTU003_d1254a50c0b69b09987630602da156d7, putative proteorhodopsin gene, partial cds. PRGD_OTU003_d1254a50c0b69b09987630602da156d7, putative proteorhodopsin gene, partial cds. KJ926892 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTGATCACTGTGCCTCTACAAATTGTAGAATTTTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTAATCGCATCGATAGTAATGTTGGTTGGTGGTTATCTAGGTGAAATTGGAGCGATGAACGTAGGTCTAGCCTTCGCTATAGGAATGGCTGGATGGCTTTATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGCAGTGGGAATGCTGCTGGTCAAGCTGCGTTTAACGCATTGAGATTAATTGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEIGAMNVGLAFAIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAATTTTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCGATAGTAATGTTGGTTGGTGGTTATCTAGGTGAA---------ATT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AACGTA------------------GGTCTAGCC---TTCGCTATAGGAATGGCTGGATGGCTTTATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGC------AGT---GGGAATGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---I------G--A-----------M----------------------NV------GLA-FAIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926779 [IV-Alpha7-HOT2C01] PRGD_OTU003_1129e992f6095a2f449dd42318c2e564 gb|KJ926779| PRGD_OTU003_1129e992f6095a2f449dd42318c2e564, putative proteorhodopsin gene, partial cds. PRGD_OTU003_1129e992f6095a2f449dd42318c2e564, putative proteorhodopsin gene, partial cds. KJ926779 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) TTGATCACTGTGCCTCTACAAATCGTAGAGTTTTATGTAATTCTTGCAGCAATCACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATCGCATCAATTGTGATGCTAGTTGGTGGTTATCTTGGTGAAATTGGAGCGATGAATGTAGGTCTAGCTTTCGCTATAGGAATGGCTGGATGGATATACATCATCTATGAAGTTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCGGCGTTTAATGCTTTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAITAVASGLFWRLLIASIVMLVGGYLGEIGAMNVGLAFAIGMAGWIYIIYEVFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATCGTAGAGTTTTATGTAATTCTTGCAGCA---------ATC---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATCGCATCAATTGTGATGCTAGTTGGTGGTTATCTTGGTGAA---------ATT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------GGTCTAGCT---TTCGCTATAGGAATGGCTGGATGGATATACATCATCTATGAAGTT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCG---GCG---TTT---AAT---GCTTTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---I-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---I------G--A-----------M----------------------NV------GLA-FAIGMAGWIYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926820 [IV-Alpha7-HOT2C01] PRGD_OTU003_652587d8c683b08274fe84c1642dd9ee gb|KJ926820| PRGD_OTU003_652587d8c683b08274fe84c1642dd9ee, putative proteorhodopsin gene, partial cds. PRGD_OTU003_652587d8c683b08274fe84c1642dd9ee, putative proteorhodopsin gene, partial cds. KJ926820 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-14.48, 113.45) TTGATCACTGTGCCTCTACAAATCGTAGAGTTCTATGTAATTCTTGCAGCAATCACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTGATCGCATCCATTGTGATGCTAGTTGGTGGTTATCTTGGTGAAATTGGAGCGATGAATGTAGGTCTAGCTTTCGCTATAGGAATGGCTGGATGGATTTACATCATCTATGAAGTTTTTGCAGGAGAAGCAAGCAAAGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCATTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAITAVASGLFWRLLIASIVMLVGGYLGEIGAMNVGLAFAIGMAGWIYIIYEVFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATCGTAGAGTTCTATGTAATTCTTGCAGCA---------ATC---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTGATCGCATCCATTGTGATGCTAGTTGGTGGTTATCTTGGTGAA---------ATT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------GGTCTAGCT---TTCGCTATAGGAATGGCTGGATGGATTTACATCATCTATGAAGTT---------------TTT------GCA---GGAGAAGCAAGCAAAGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCATTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---I-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---I------G--A-----------M----------------------NV------GLA-FAIGMAGWIYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926794 [IV-Alpha7-HOT2C01] PRGD_OTU003_2f57ee7ad4c3d1ebb1de73a333efb851 gb|KJ926794| PRGD_OTU003_2f57ee7ad4c3d1ebb1de73a333efb851, putative proteorhodopsin gene, partial cds. PRGD_OTU003_2f57ee7ad4c3d1ebb1de73a333efb851, putative proteorhodopsin gene, partial cds. KJ926794 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCAGCAATCACTGCTGTTGCTTCAGGCTTATTTTGGAGACTGTTAATTGCATCAATTGTGATGCTGGTTGGTGGTTATCTTGGTGAAATTGGAGCGATGAACGTAGGTCTAGCCTTCGCTATAGGAATGGCTGGATGGATATACATCATCTATGAAGTATTTGCAGGAGAAGCAAGCAAAGCAAGTGCTGGTAGCGGCAATGCTGCTGGTCAAGCTGCGTTTAACGCATTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAITAVASGLFWRLLIASIVMLVGGYLGEIGAMNVGLAFAIGMAGWIYIIYEVFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCAGCA---------ATC---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTTTGGAGA---CTGTTAATTGCATCAATTGTGATGCTGGTTGGTGGTTATCTTGGTGAA---------ATT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AACGTA------------------GGTCTAGCC---TTCGCTATAGGAATGGCTGGATGGATATACATCATCTATGAAGTA---------------TTT------GCA---GGAGAAGCAAGCAAAGCAAGTGCTGGT------AGC---GGCAATGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCATTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---I-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---I------G--A-----------M----------------------NV------GLA-FAIGMAGWIYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926851 [IV-Alpha7-HOT2C01] PRGD_OTU003_9be7607ccaa6ac78d0d83eb24320a944 gb|KJ926851| PRGD_OTU003_9be7607ccaa6ac78d0d83eb24320a944, putative proteorhodopsin gene, partial cds. PRGD_OTU003_9be7607ccaa6ac78d0d83eb24320a944, putative proteorhodopsin gene, partial cds. KJ926851 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) TTGATCACTGTGCCTCTACAAATCGTAGAGTTCTATGTAATTCTTGCAGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTTGGTGAAGTTGGGGCGATGAATGTTGGTCTAGCCTTCGCTATTGGGATGGCTGGATGGATATACATCATCTATGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAATGCTGCTGGTCAAACTGCGTTTAACGCATTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVGLAFAIGMAGWIYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATCGTAGAGTTCTATGTAATTCTTGCAGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTTGGTGAA---------GTT------------------GGG------GCG---------------------------------ATG------------------------------------------------------------------AATGTT------------------GGTCTAGCC---TTCGCTATTGGGATGGCTGGATGGATATACATCATCTATGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAATGCTGCTGGT---CAA---ACT---GCG---TTT---AAC---GCATTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------GLA-FAIGMAGWIYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926868 [IV-Alpha7-HOT2C01] PRGD_OTU003_b0a867d6bfe840c86527643e88ad73a2 gb|KJ926868| PRGD_OTU003_b0a867d6bfe840c86527643e88ad73a2, putative proteorhodopsin gene, partial cds. PRGD_OTU003_b0a867d6bfe840c86527643e88ad73a2, putative proteorhodopsin gene, partial cds. KJ926868 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATTACGGTGCCTCTGCAAATTGTAGAGTTCTATGTAATTCTTGCAGCAATCACTGCTGTTGCTTCAGGTTTATTCTGGAGACTGTTAATCGCATCAATAGTAATGTTGGTTGGTGGTTATCTAGGTGAAATTGGAGCGATGAATGTGGGTCTAGCCTTCGCTATAGGAATGGCTGGATGGATATACATCATCTATGAAGTTTTTGCAGGCGAAGCAAGCAAAGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTCAACGCGTTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAITAVASGLFWRLLIASIVMLVGGYLGEIGAMNVGLAFAIGMAGWIYIIYEVFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACGGTGCCTCTGCAAATTGTAGAGTTCTATGTAATTCTTGCAGCA---------ATC---ACTGCTGTTGCTTCA---GGTTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCAATAGTAATGTTGGTTGGTGGTTATCTAGGTGAA---------ATT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTG------------------GGTCTAGCC---TTCGCTATAGGAATGGCTGGATGGATATACATCATCTATGAAGTT---------------TTT------GCA---GGCGAAGCAAGCAAAGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTC---AAC---GCGTTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---I-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---I------G--A-----------M----------------------NV------GLA-FAIGMAGWIYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926881 [IV-Alpha7-HOT2C01] PRGD_OTU003_bd5921d2942a03ed77fe79b01ff1d6a1 gb|KJ926881| PRGD_OTU003_bd5921d2942a03ed77fe79b01ff1d6a1, putative proteorhodopsin gene, partial cds. PRGD_OTU003_bd5921d2942a03ed77fe79b01ff1d6a1, putative proteorhodopsin gene, partial cds. KJ926881 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) TTGATTACGGTGCCTCTGCAAATTGTAGAGTTCTATGTAATTCTTGCAGCAATCACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATCGCATCAATAGTAATGTTGGTTGGTGGTTATCTAGGTGAAATTGGAGCGATGAATGTGGGTCTAGCCTTCGCTATAGGAATGGCTGGATGGATATACATCATCTATGAAGTTTTTGCAGGCGAAGCAAGCAAAGCAAGTGCTGGTAGTGGAAACGCTGCAGGTCAAGCTGCGTTCAACGCGTTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAITAVASGLFWRLLIASIVMLVGGYLGEIGAMNVGLAFAIGMAGWIYIIYEVFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACGGTGCCTCTGCAAATTGTAGAGTTCTATGTAATTCTTGCAGCA---------ATC---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATCGCATCAATAGTAATGTTGGTTGGTGGTTATCTAGGTGAA---------ATT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTG------------------GGTCTAGCC---TTCGCTATAGGAATGGCTGGATGGATATACATCATCTATGAAGTT---------------TTT------GCA---GGCGAAGCAAGCAAAGCAAGTGCTGGT------AGT---GGAAACGCTGCAGGT---CAA---GCT---GCG---TTC---AAC---GCGTTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---I-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---I------G--A-----------M----------------------NV------GLA-FAIGMAGWIYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926893 [IV-Alpha7-HOT2C01] PRGD_OTU003_d14c76119e0b23c41a7333e4d6718c37 gb|KJ926893| PRGD_OTU003_d14c76119e0b23c41a7333e4d6718c37, putative proteorhodopsin gene, partial cds. PRGD_OTU003_d14c76119e0b23c41a7333e4d6718c37, putative proteorhodopsin gene, partial cds. KJ926893 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), North Pacific Ocean (50.06, -139.53), Mediterranean Sea (33.935, 18.508), Indian Ocean (-23.5956, 69.0419) TTGATTACGGTGCCTCTGCAAATTGTAGAGTTCTATGTAATTCTTGCAGCAATGACTGCTGTTGCCTCTGGTTTATTCTGGAGACTGTTAATCGCATCAATAGTAATGTTGGTTGGTGGTTATCTAGGTGAAATTGGAGCGATGAATGTAGGTCTAGCTTTCGCAATAGGAATGGCTGGATGGATATACATCATCTATGAAGTTTTTGCAGGCGAAGCAAGCAAAGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTCAACGCGTTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEIGAMNVGLAFAIGMAGWIYIIYEVFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACGGTGCCTCTGCAAATTGTAGAGTTCTATGTAATTCTTGCAGCA---------ATG---ACTGCTGTTGCCTCT---GGTTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCAATAGTAATGTTGGTTGGTGGTTATCTAGGTGAA---------ATT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------GGTCTAGCT---TTCGCAATAGGAATGGCTGGATGGATATACATCATCTATGAAGTT---------------TTT------GCA---GGCGAAGCAAGCAAAGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTC---AAC---GCGTTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---I------G--A-----------M----------------------NV------GLA-FAIGMAGWIYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926830 [IV-Alpha7-HOT2C01] PRGD_OTU003_7084a37d374cea59b93d93f484928f69 gb|KJ926830| PRGD_OTU003_7084a37d374cea59b93d93f484928f69, putative proteorhodopsin gene, partial cds. PRGD_OTU003_7084a37d374cea59b93d93f484928f69, putative proteorhodopsin gene, partial cds. KJ926830 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Mediterranean Sea (33.762, 29.175), Indian Ocean (-35.05, 23.73) TTGATTACAGTGCCTCTGCAAATTGTAGAGTTCTATGTAATTCTTGCAGCAATCACTGCTGTTGCTTCAGGTTTATTCTGGAGACTGTTAATCGCATCAATAGTAATGTTGGTTGGTGGTTATCTAGGTGAAATTGGAGCGATGAATGTAGGTCTAGCCTTCGCTATAGGAATGGCTGGATGGATATACATTATCTATGAAGTTTTTGCAGGCGAAGCAAGCAAAGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTCAACGCGTTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAITAVASGLFWRLLIASIVMLVGGYLGEIGAMNVGLAFAIGMAGWIYIIYEVFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACAGTGCCTCTGCAAATTGTAGAGTTCTATGTAATTCTTGCAGCA---------ATC---ACTGCTGTTGCTTCA---GGTTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCAATAGTAATGTTGGTTGGTGGTTATCTAGGTGAA---------ATT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------GGTCTAGCC---TTCGCTATAGGAATGGCTGGATGGATATACATTATCTATGAAGTT---------------TTT------GCA---GGCGAAGCAAGCAAAGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTC---AAC---GCGTTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---I-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---I------G--A-----------M----------------------NV------GLA-FAIGMAGWIYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926908 [IV-Alpha7-HOT2C01] PRGD_OTU003_e379d9269745ed87337801b9c2088416 gb|KJ926908| PRGD_OTU003_e379d9269745ed87337801b9c2088416, putative proteorhodopsin gene, partial cds. PRGD_OTU003_e379d9269745ed87337801b9c2088416, putative proteorhodopsin gene, partial cds. KJ926908 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTGATTACGGTGCCTCTGCAAATTGTAGAGTTCTATGTAATTCTTGCAGCAATCACTGCTGTTGCTTCAGGTTTATTCTGGAGACTGTTAATCGCATCAATAGTAATGTTGGTTGGTGGTTATTTAGGTGAAATTGGAGCAATGAATGTAGGTCTAGCCTTCGCTATAGGAATGGCTGGATGGATATACATCATCTATGAAGTTTTTGCAGGCGAAGCAAGCAAAGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTCAACGCGTTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAITAVASGLFWRLLIASIVMLVGGYLGEIGAMNVGLAFAIGMAGWIYIIYEVFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACGGTGCCTCTGCAAATTGTAGAGTTCTATGTAATTCTTGCAGCA---------ATC---ACTGCTGTTGCTTCA---GGTTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCAATAGTAATGTTGGTTGGTGGTTATTTAGGTGAA---------ATT------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------AATGTA------------------GGTCTAGCC---TTCGCTATAGGAATGGCTGGATGGATATACATCATCTATGAAGTT---------------TTT------GCA---GGCGAAGCAAGCAAAGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTC---AAC---GCGTTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---I-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---I------G--A-----------M----------------------NV------GLA-FAIGMAGWIYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926833 [IV-Alpha7-HOT2C01] PRGD_OTU003_7c63c8f9b0df4af69b3f4457d3eba7e5 gb|KJ926833| PRGD_OTU003_7c63c8f9b0df4af69b3f4457d3eba7e5, putative proteorhodopsin gene, partial cds. PRGD_OTU003_7c63c8f9b0df4af69b3f4457d3eba7e5, putative proteorhodopsin gene, partial cds. KJ926833 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATTACGGTGCCTCTGCAAATTGTAGAGTTCTATGTAATTCTTGCAGCAATCACTGCTGTTGCTTCAGGTTTATTCTGGAGACTGTTAATCGCATCAATAGTAATGTTGGTTGGTGGTTATCTAGGTGAAATTGGAGCGATGAATGTAGGTCTAGCCTTCGCTATAGGAATGGCTGGATGGATATACATCATCTATGAAGTTTTTGCAGGAGAAGCAAGTAAAGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCTTTCAACGCGTTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAITAVASGLFWRLLIASIVMLVGGYLGEIGAMNVGLAFAIGMAGWIYIIYEVFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACGGTGCCTCTGCAAATTGTAGAGTTCTATGTAATTCTTGCAGCA---------ATC---ACTGCTGTTGCTTCA---GGTTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCAATAGTAATGTTGGTTGGTGGTTATCTAGGTGAA---------ATT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------GGTCTAGCC---TTCGCTATAGGAATGGCTGGATGGATATACATCATCTATGAAGTT---------------TTT------GCA---GGAGAAGCAAGTAAAGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCT---TTC---AAC---GCGTTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---I-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---I------G--A-----------M----------------------NV------GLA-FAIGMAGWIYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926789 [IV-Alpha7-HOT2C01] PRGD_OTU003_2389522593588c3245b7e3cc3ffb5621 gb|KJ926789| PRGD_OTU003_2389522593588c3245b7e3cc3ffb5621, putative proteorhodopsin gene, partial cds. PRGD_OTU003_2389522593588c3245b7e3cc3ffb5621, putative proteorhodopsin gene, partial cds. KJ926789 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Atlantic side (71.501, 19.8025), Indian Ocean (-35.05, 23.73; -33.28, 45.35) TTGATTACGGTGCCTCTGCAAATTGTAGAGTTCTATGTAATTCTTGCAGCAATCACTGCTGTTGCTTCAGGCTTATTCTGGAGGCTGTTAATCGCATCAATAGTAATGTTGGTTGGTGGTTATCTAGGTGAAATTGGAGCGATGAATGTAGGTCTAGCCTTCGCTATAGGAATGGCTGGATGGATATACATCATCTATGAAGTTTTTGCAGGAGAAGCAAGCAAAGCAAGTGCTGGTAGTGGAAACGCAGCTGGTCAAGCTGCGTTCAACGCGTTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAITAVASGLFWRLLIASIVMLVGGYLGEIGAMNVGLAFAIGMAGWIYIIYEVFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACGGTGCCTCTGCAAATTGTAGAGTTCTATGTAATTCTTGCAGCA---------ATC---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGG---CTGTTAATCGCATCAATAGTAATGTTGGTTGGTGGTTATCTAGGTGAA---------ATT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------GGTCTAGCC---TTCGCTATAGGAATGGCTGGATGGATATACATCATCTATGAAGTT---------------TTT------GCA---GGAGAAGCAAGCAAAGCAAGTGCTGGT------AGT---GGAAACGCAGCTGGT---CAA---GCT---GCG---TTC---AAC---GCGTTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---I-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---I------G--A-----------M----------------------NV------GLA-FAIGMAGWIYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926811 [IV-Alpha7-HOT2C01] PRGD_OTU003_4c207ae12d05bdfbd49b9ac2e61a24e5 gb|KJ926811| PRGD_OTU003_4c207ae12d05bdfbd49b9ac2e61a24e5, putative proteorhodopsin gene, partial cds. PRGD_OTU003_4c207ae12d05bdfbd49b9ac2e61a24e5, putative proteorhodopsin gene, partial cds. KJ926811 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTGATTACGGTGCCTCTGCAAATTGTAGAGTTCTATGTAATTCTTGCAGCAATCACTGCTGTTGCTTCAGGCTTATTCTGGAGGCTGTTAATCGCATCAATAGTAATGTTGGTTGGTGGTTATCTAGGTGAAATTGGAGCGATGAATGTAGGTCTTGCCTTCGCTATAGGAATGGCTGGATGGATATACATCATCTATGAAGTTTTTGCAGGAGAAGCAAGCAAAGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTCAACGCGTTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAITAVASGLFWRLLIASIVMLVGGYLGEIGAMNVGLAFAIGMAGWIYIIYEVFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACGGTGCCTCTGCAAATTGTAGAGTTCTATGTAATTCTTGCAGCA---------ATC---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGG---CTGTTAATCGCATCAATAGTAATGTTGGTTGGTGGTTATCTAGGTGAA---------ATT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------GGTCTTGCC---TTCGCTATAGGAATGGCTGGATGGATATACATCATCTATGAAGTT---------------TTT------GCA---GGAGAAGCAAGCAAAGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTC---AAC---GCGTTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---I-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---I------G--A-----------M----------------------NV------GLA-FAIGMAGWIYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926887 [IV-Alpha7-HOT2C01] PRGD_OTU003_c93ad91ebfcf82b5b611b28563417fb4 gb|KJ926887| PRGD_OTU003_c93ad91ebfcf82b5b611b28563417fb4, putative proteorhodopsin gene, partial cds. PRGD_OTU003_c93ad91ebfcf82b5b611b28563417fb4, putative proteorhodopsin gene, partial cds. KJ926887 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTGATTACGGTGCCTCTGCAAATTGTAGAGTTCTATGTAATTCTTGCAGCAATCACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTAATCGCATCAATAGTAATGTTGGTTGGTGGTTATCTAGGTGAAATTGGAGCGATGAATGTTGGTCTAGCCTTCGCTATAGGAATGGCTGGATGGATATATATCATCTATGAAGTTTTTGCAGGAGAAGCAAGCAAAGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTCAACGCGTTGAGATTAATCGTTACAGTA LITVPLQIVEFYVILAAITAVASGLFWRLLIASIVMLVGGYLGEIGAMNVGLAFAIGMAGWIYIIYEVFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACGGTGCCTCTGCAAATTGTAGAGTTCTATGTAATTCTTGCAGCA---------ATC---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCAATAGTAATGTTGGTTGGTGGTTATCTAGGTGAA---------ATT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTT------------------GGTCTAGCC---TTCGCTATAGGAATGGCTGGATGGATATATATCATCTATGAAGTT---------------TTT------GCA---GGAGAAGCAAGCAAAGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTC---AAC---GCGTTG---AGATTAATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---I-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---I------G--A-----------M----------------------NV------GLA-FAIGMAGWIYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926853 [IV-Alpha7-HOT2C01] PRGD_OTU003_9d9a06a85d8f9c0b1dc36df47bdf5abb gb|KJ926853| PRGD_OTU003_9d9a06a85d8f9c0b1dc36df47bdf5abb, putative proteorhodopsin gene, partial cds. PRGD_OTU003_9d9a06a85d8f9c0b1dc36df47bdf5abb, putative proteorhodopsin gene, partial cds. KJ926853 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTGATCACGGTGCCTTTACAAATTGTAGAGTTCTATGTAATTCTTGCAGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAATTGGAGCGATGAACGTAGGTCTAGCCTTTGCTATAGGAATGGCTGGATGGATATACATCATCTACGAGGTTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCAGCTGGTCAAGCTGCGTTCAACGCGTTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEIGAMNVGLAFAIGMAGWIYIIYEVFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACGGTGCCTTTACAAATTGTAGAGTTCTATGTAATTCTTGCAGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------ATT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AACGTA------------------GGTCTAGCC---TTTGCTATAGGAATGGCTGGATGGATATACATCATCTACGAGGTT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCAGCTGGT---CAA---GCT---GCG---TTC---AAC---GCGTTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---I------G--A-----------M----------------------NV------GLA-FAIGMAGWIYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926891 [IV-Alpha7-HOT2C01] PRGD_OTU003_d08b774e420bbfe3cb03e115c1b5ea91 gb|KJ926891| PRGD_OTU003_d08b774e420bbfe3cb03e115c1b5ea91, putative proteorhodopsin gene, partial cds. PRGD_OTU003_d08b774e420bbfe3cb03e115c1b5ea91, putative proteorhodopsin gene, partial cds. KJ926891 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACAGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACTCTAGCGTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGCAGTGGAAATGCTGCTGGTCAAGCTGCGTTCAACGCGTTGAGATTAATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCG---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGC------AGT---GGAAATGCTGCTGGT---CAA---GCT---GCG---TTC---AAC---GCGTTG---AGATTAATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926905 [IV-Alpha7-HOT2C01] PRGD_OTU003_e05e811c5a1da91ce41c9d87f6a75729 gb|KJ926905| PRGD_OTU003_e05e811c5a1da91ce41c9d87f6a75729, putative proteorhodopsin gene, partial cds. PRGD_OTU003_e05e811c5a1da91ce41c9d87f6a75729, putative proteorhodopsin gene, partial cds. KJ926905 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGATTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTCAACGCGTTGAGATTAATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---TTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTC---AAC---GCGTTG---AGATTAATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926815 [IV-Alpha7-HOT2C01] PRGD_OTU003_5cdfec420a7f679784b5451ce8ca0f33 gb|KJ926815| PRGD_OTU003_5cdfec420a7f679784b5451ce8ca0f33, putative proteorhodopsin gene, partial cds. PRGD_OTU003_5cdfec420a7f679784b5451ce8ca0f33, putative proteorhodopsin gene, partial cds. KJ926815 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATTACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTTTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGACAAGCTGCATTTAACGCGTTGAGATTAATTGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTTTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGA---CAA---GCT---GCA---TTT---AAC---GCGTTG---AGATTAATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926872 [IV-Alpha7-HOT2C01] PRGD_OTU003_b4ead5f7f9a7afedc865f70074495025 gb|KJ926872| PRGD_OTU003_b4ead5f7f9a7afedc865f70074495025, putative proteorhodopsin gene, partial cds. PRGD_OTU003_b4ead5f7f9a7afedc865f70074495025, putative proteorhodopsin gene, partial cds. KJ926872 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACACTAGCCTTCGTTATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTAGCC---TTCGTTATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926816 [IV-Alpha7-HOT2C01] PRGD_OTU003_5d682294f8ac4c6d44637528e58d4dfd gb|KJ926816| PRGD_OTU003_5d682294f8ac4c6d44637528e58d4dfd, putative proteorhodopsin gene, partial cds. PRGD_OTU003_5d682294f8ac4c6d44637528e58d4dfd, putative proteorhodopsin gene, partial cds. KJ926816 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683) TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTAATTGCATCTATCGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACACTAGCCTTCGTTATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATTGCATCTATCGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTAGCC---TTCGTTATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926863 [IV-Alpha7-HOT2C01] PRGD_OTU003_ac02c871d7157593ef0234bac381456e gb|KJ926863| PRGD_OTU003_ac02c871d7157593ef0234bac381456e, putative proteorhodopsin gene, partial cds. PRGD_OTU003_ac02c871d7157593ef0234bac381456e, putative proteorhodopsin gene, partial cds. KJ926863 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGTTTATTCTGGAGACTGTTAATCGCATCTATCGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACACTAGCCTTCGTTATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGTTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCTATCGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTAGCC---TTCGTTATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926859 [IV-Alpha7-HOT2C01] PRGD_OTU003_a73578ebf3b16fd124a1adf5f9ed075b gb|KJ926859| PRGD_OTU003_a73578ebf3b16fd124a1adf5f9ed075b, putative proteorhodopsin gene, partial cds. PRGD_OTU003_a73578ebf3b16fd124a1adf5f9ed075b, putative proteorhodopsin gene, partial cds. KJ926859 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175) TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTAATTGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTTATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATTGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATTGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTTATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926818 [IV-Alpha7-HOT2C01] PRGD_OTU003_6135538f7ee2416390a8c5fffb8f2c38 gb|KJ926818| PRGD_OTU003_6135538f7ee2416390a8c5fffb8f2c38, putative proteorhodopsin gene, partial cds. PRGD_OTU003_6135538f7ee2416390a8c5fffb8f2c38, putative proteorhodopsin gene, partial cds. KJ926818 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), Arctic Ocean-Atlantic side (71.501, 19.8025), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACTGTGCCTCTACAAATTGTAGAGTTTTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCTGGCTTATTCTGGAGATTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACACTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCTTTGAGATTAATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTTTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCT---GGCTTA------------------------------------TTCTGGAGA---TTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCTTTG---AGATTAATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926885 [IV-Alpha7-HOT2C01] PRGD_OTU003_c69d01c8c49ca56db427f57d0a656058 gb|KJ926885| PRGD_OTU003_c69d01c8c49ca56db427f57d0a656058, putative proteorhodopsin gene, partial cds. PRGD_OTU003_c69d01c8c49ca56db427f57d0a656058, putative proteorhodopsin gene, partial cds. KJ926885 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACACTAGCCTTCGTTATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAATGCTGCTGGTCAAGCTGCTTTTAACGCGTTGAGATTAATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTAGCC---TTCGTTATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAATGCTGCTGGT---CAA---GCT---GCT---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926791 [IV-Alpha7-HOT2C01] PRGD_OTU003_24a0199bd96e82f473b09d9061accbc4 gb|KJ926791| PRGD_OTU003_24a0199bd96e82f473b09d9061accbc4, putative proteorhodopsin gene, partial cds. PRGD_OTU003_24a0199bd96e82f473b09d9061accbc4, putative proteorhodopsin gene, partial cds. KJ926791 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Pacific side (69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATCACAGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGTTTATTCTGGAGACTGTTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACTCTAGCGTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGTTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCG---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926845 [IV-Alpha7-HOT2C01] PRGD_OTU003_8ff5a6ff7b8f2a396865a5b671d2230b gb|KJ926845| PRGD_OTU003_8ff5a6ff7b8f2a396865a5b671d2230b, putative proteorhodopsin gene, partial cds. PRGD_OTU003_8ff5a6ff7b8f2a396865a5b671d2230b, putative proteorhodopsin gene, partial cds. KJ926845 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACAGTGCCTCTACAGATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTAATCGCATCTATCGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTTATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCTCTACAGATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCTATCGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTTATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926850 [IV-Alpha7-HOT2C01] PRGD_OTU003_9bae823428ff6d8f4168ce1a89284914 gb|KJ926850| PRGD_OTU003_9bae823428ff6d8f4168ce1a89284914, putative proteorhodopsin gene, partial cds. PRGD_OTU003_9bae823428ff6d8f4168ce1a89284914, putative proteorhodopsin gene, partial cds. KJ926850 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-23.5956, 69.0419) TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTAATCGCATCTATAGTAATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGAATGGCCGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCTATAGTAATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGAATGGCCGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926832 [IV-Alpha7-HOT2C01] PRGD_OTU003_7989852136b855aa260a72418e911fd2 gb|KJ926832| PRGD_OTU003_7989852136b855aa260a72418e911fd2, putative proteorhodopsin gene, partial cds. PRGD_OTU003_7989852136b855aa260a72418e911fd2, putative proteorhodopsin gene, partial cds. KJ926832 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Mediterranean Sea (33.762, 29.175), Indian Ocean (-23.5956, 69.0419) TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACTCTAGCCTTCGTCATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGTAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTCATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGTAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926805 [IV-Alpha7-HOT2C01] PRGD_OTU003_4093a0261588337d578722f2b68fb22c gb|KJ926805| PRGD_OTU003_4093a0261588337d578722f2b68fb22c, putative proteorhodopsin gene, partial cds. PRGD_OTU003_4093a0261588337d578722f2b68fb22c, putative proteorhodopsin gene, partial cds. KJ926805 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACTGTGCCTCTACAAATTGTAGAGTTTTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTACCTAGGTGAAGTTGGAGCGATGAATGTAACCCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTGACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTTTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTACCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACCCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTGACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926813 [IV-Alpha7-HOT2C01] PRGD_OTU003_4fc5b0e73d13fe453afa0bef606198ab gb|KJ926813| PRGD_OTU003_4fc5b0e73d13fe453afa0bef606198ab, putative proteorhodopsin gene, partial cds. PRGD_OTU003_4fc5b0e73d13fe453afa0bef606198ab, putative proteorhodopsin gene, partial cds. KJ926813 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-14.48, 113.45) TTGATCACTGTGCCTCTACAAATTGTAGAGTTTTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGCTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAATGCGTTGAGATTAATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTTTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGCTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAT---GCGTTG---AGATTAATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926910 [IV-Alpha7-HOT2C01] PRGD_OTU003_e6999d26716700e5d57cc04388030d91 gb|KJ926910| PRGD_OTU003_e6999d26716700e5d57cc04388030d91, putative proteorhodopsin gene, partial cds. PRGD_OTU003_e6999d26716700e5d57cc04388030d91, putative proteorhodopsin gene, partial cds. KJ926910 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Indian Ocean (-33.28, 45.35) TTGATTACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTGTTCTGGAGACTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTACGAAATTTTTGCAGGAGAAGCAAGTAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTACGAAATT---------------TTT------GCA---GGAGAAGCAAGTAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926896 [IV-Alpha7-HOT2C01] PRGD_OTU003_d497c80ea462de4667340cc5ac776933 gb|KJ926896| PRGD_OTU003_d497c80ea462de4667340cc5ac776933, putative proteorhodopsin gene, partial cds. PRGD_OTU003_d497c80ea462de4667340cc5ac776933, putative proteorhodopsin gene, partial cds. KJ926896 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Indian Ocean (-33.28, 45.35) TTGATTACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTGTTCTGGAGACTGTTAATTGCATCAATCGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTACGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATCGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTACGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926914 [IV-Alpha7-HOT2C01] PRGD_OTU003_ed588cc761a8dee39ae9a90e8318b7c4 gb|KJ926914| PRGD_OTU003_ed588cc761a8dee39ae9a90e8318b7c4, putative proteorhodopsin gene, partial cds. PRGD_OTU003_ed588cc761a8dee39ae9a90e8318b7c4, putative proteorhodopsin gene, partial cds. KJ926914 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Indian Ocean (-33.28, 45.35) TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTGTATATCATCTACGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGCGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATTGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTGTATATCATCTACGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGCGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926913 [IV-Alpha7-HOT2C01] PRGD_OTU003_eaaa992904ccd0106d366d525b3ab49a gb|KJ926913| PRGD_OTU003_eaaa992904ccd0106d366d525b3ab49a, putative proteorhodopsin gene, partial cds. PRGD_OTU003_eaaa992904ccd0106d366d525b3ab49a, putative proteorhodopsin gene, partial cds. KJ926913 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACTGTGCCTCTACAGATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTTACCCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAGATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTT------------------ACCCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926803 [IV-Alpha7-HOT2C01] PRGD_OTU003_3e281c2e018d09ec92c79a3d75f0d523 gb|KJ926803| PRGD_OTU003_3e281c2e018d09ec92c79a3d75f0d523, putative proteorhodopsin gene, partial cds. PRGD_OTU003_3e281c2e018d09ec92c79a3d75f0d523, putative proteorhodopsin gene, partial cds. KJ926803 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCAGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTAATCGCATCTATAGTAATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTACGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCATTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCAGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCTATAGTAATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTACGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCATTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926921 [IV-Alpha7-HOT2C01] PRGD_OTU003_fae7a2d641286262aadc7e7863348839 gb|KJ926921| PRGD_OTU003_fae7a2d641286262aadc7e7863348839, putative proteorhodopsin gene, partial cds. PRGD_OTU003_fae7a2d641286262aadc7e7863348839, putative proteorhodopsin gene, partial cds. KJ926921 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATTACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCAGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTAATCGCATCCATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCATTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCAGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCCATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCATTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926855 [IV-Alpha7-HOT2C01] PRGD_OTU003_a4c83c908be63f306e1dc64e40632086 gb|KJ926855| PRGD_OTU003_a4c83c908be63f306e1dc64e40632086, putative proteorhodopsin gene, partial cds. PRGD_OTU003_a4c83c908be63f306e1dc64e40632086, putative proteorhodopsin gene, partial cds. KJ926855 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACTGTGCCTTTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCATTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTTTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCATTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926814 [IV-Alpha7-HOT2C01] PRGD_OTU003_5bf9b871e07a572307d91d6d02f22ac4 gb|KJ926814| PRGD_OTU003_5bf9b871e07a572307d91d6d02f22ac4, putative proteorhodopsin gene, partial cds. PRGD_OTU003_5bf9b871e07a572307d91d6d02f22ac4, putative proteorhodopsin gene, partial cds. KJ926814 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) TTGATCACTGTGCCTTTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTGTTCTGGAGACTGTTAATCGCATCAATCGTGATGTTGGTTGGTGGTTATCTGGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCGAGCGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCATTTAACGCGTTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTTTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATCGCATCAATCGTGATGTTGGTTGGTGGTTATCTGGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCGAGCGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCA---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926856 [IV-Alpha7-HOT2C01] PRGD_OTU003_a61c1d2f6429f52cca15c451dbee3673 gb|KJ926856| PRGD_OTU003_a61c1d2f6429f52cca15c451dbee3673, putative proteorhodopsin gene, partial cds. PRGD_OTU003_a61c1d2f6429f52cca15c451dbee3673, putative proteorhodopsin gene, partial cds. KJ926856 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) TTGATTACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCATCAGGCTTGTTCTGGAGACTGTTAATCGCATCAATCGTGATGTTGGTTGGTGGTTATCTGGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGCTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCGAGCGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCATTTAACGCGTTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCATCA---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATCGCATCAATCGTGATGTTGGTTGGTGGTTATCTGGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGCTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCGAGCGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCA---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926889 [IV-Alpha7-HOT2C01] PRGD_OTU003_c9fd3fb62ed06db8db0db11d664a4982 gb|KJ926889| PRGD_OTU003_c9fd3fb62ed06db8db0db11d664a4982, putative proteorhodopsin gene, partial cds. PRGD_OTU003_c9fd3fb62ed06db8db0db11d664a4982, putative proteorhodopsin gene, partial cds. KJ926889 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -33.9602, -73.3769), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45; -33.28, 45.35) TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTGTTCTGGAGACTGTTAATCGCATCAATCGTGATGTTAGTTGGTGGTTATCTGGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTACGAAATTTTTGCAGGAGAAGCAAGCAAGGCGAGCGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGGTTAATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATCGCATCAATCGTGATGTTAGTTGGTGGTTATCTGGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTACGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCGAGCGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGGTTAATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926800 [IV-Alpha7-HOT2C01] PRGD_OTU003_39426fa4319399cfbedd3db1a49cb17a gb|KJ926800| PRGD_OTU003_39426fa4319399cfbedd3db1a49cb17a, putative proteorhodopsin gene, partial cds. PRGD_OTU003_39426fa4319399cfbedd3db1a49cb17a, putative proteorhodopsin gene, partial cds. KJ926800 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Mediterranean Sea (38.6308, 7.9097) TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTGTTCTGGAGACTGTTAATCGCATCAATCGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTACGAAATTTTTGCAGGAGAAGCAAGCAAGGCGAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCATTGAGATTAATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATCGCATCAATCGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTACGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCGAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCATTG---AGATTAATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926911 [IV-Alpha7-HOT2C01] PRGD_OTU003_e704abacf5cdededade41f0db936e744 gb|KJ926911| PRGD_OTU003_e704abacf5cdededade41f0db936e744, putative proteorhodopsin gene, partial cds. PRGD_OTU003_e704abacf5cdededade41f0db936e744, putative proteorhodopsin gene, partial cds. KJ926911 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTAATCGCATCTATCGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTTGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCATTGAGATTAATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCTATCGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTTGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCATTG---AGATTAATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926819 [IV-Alpha7-HOT2C01] PRGD_OTU003_626fd9a76d6ca127b7fa2784517df623 gb|KJ926819| PRGD_OTU003_626fd9a76d6ca127b7fa2784517df623, putative proteorhodopsin gene, partial cds. PRGD_OTU003_626fd9a76d6ca127b7fa2784517df623, putative proteorhodopsin gene, partial cds. KJ926819 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACTGTGCCTCTACAAATTGTAGAGTTTTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTAATCGCATCAATCGTGATGTTGGTTGGTGGTTATCTAGGTGAGGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTAATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTTTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCAATCGTGATGTTGGTTGGTGGTTATCTAGGTGAG---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTAATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926915 [IV-Alpha7-HOT2C01] PRGD_OTU003_edcde5bb1155799585cafab970920d7f gb|KJ926915| PRGD_OTU003_edcde5bb1155799585cafab970920d7f, putative proteorhodopsin gene, partial cds. PRGD_OTU003_edcde5bb1155799585cafab970920d7f, putative proteorhodopsin gene, partial cds. KJ926915 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTGATCACTGTGCCTCTACAAATTGTAGAGTTTTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCAGGCTTATTCTGGAGACTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCTTTGAGATTAATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTTTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCTTTG---AGATTAATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926864 [IV-Alpha7-HOT2C01] PRGD_OTU003_ac090b1cdfb23eff10d59293f4b3c813 gb|KJ926864| PRGD_OTU003_ac090b1cdfb23eff10d59293f4b3c813, putative proteorhodopsin gene, partial cds. PRGD_OTU003_ac090b1cdfb23eff10d59293f4b3c813, putative proteorhodopsin gene, partial cds. KJ926864 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTTGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGCGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCATTGAGATTAATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTTGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGC---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCATTG---AGATTAATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926918 [IV-Alpha7-HOT2C01] PRGD_OTU003_f65dcdc1f79590c0987790880d3a8d4a gb|KJ926918| PRGD_OTU003_f65dcdc1f79590c0987790880d3a8d4a, putative proteorhodopsin gene, partial cds. PRGD_OTU003_f65dcdc1f79590c0987790880d3a8d4a, putative proteorhodopsin gene, partial cds. KJ926918 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGATTGTTAATCGCATCAATAGTGATGCTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATTGGAATGGCTGGATGGTTATATATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCATTGAGATTAATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---TTGTTAATCGCATCAATAGTGATGCTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATTGGAATGGCTGGATGGTTATATATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCATTG---AGATTAATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926774 [IV-Alpha7-HOT2C01] PRGD_OTU003_0c2ccd0932c8adcec9011251507f2148 gb|KJ926774| PRGD_OTU003_0c2ccd0932c8adcec9011251507f2148, putative proteorhodopsin gene, partial cds. PRGD_OTU003_0c2ccd0932c8adcec9011251507f2148, putative proteorhodopsin gene, partial cds. KJ926774 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTGATCACTGTGCCTCTTCAAATTGTAGAGTTTTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATTGGAATGGCTGGATGGTTGTATATCATCTATGAAATTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGCGGAAACGCTGCTGGTCAAGCTGCGTTTAATGCGTTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTTCAAATTGTAGAGTTTTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATTGGAATGGCTGGATGGTTGTATATCATCTATGAAATT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGC---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAT---GCGTTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926871 [IV-Alpha7-HOT2C01] PRGD_OTU003_b498ed480b8e7dd4d83f07916604cd01 gb|KJ926871| PRGD_OTU003_b498ed480b8e7dd4d83f07916604cd01, putative proteorhodopsin gene, partial cds. PRGD_OTU003_b498ed480b8e7dd4d83f07916604cd01, putative proteorhodopsin gene, partial cds. KJ926871 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -33.28, 45.35) TTGATCACTGTGCCTCTGCAAATTGTAGAGTTTTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGGTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATTGGAATGGCTGGATGGTTGTATATCATCTATGAAATTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGCGGAAACGCTGCTGGTCAAGCTGCGTTTAATGCGTTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTGCAAATTGTAGAGTTTTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGGTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATTGGAATGGCTGGATGGTTGTATATCATCTATGAAATT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGC---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAT---GCGTTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926849 [IV-Alpha7-HOT2C01] PRGD_OTU003_9a7b55a8fcc7c586ffca18e96c491cc5 gb|KJ926849| PRGD_OTU003_9a7b55a8fcc7c586ffca18e96c491cc5, putative proteorhodopsin gene, partial cds. PRGD_OTU003_9a7b55a8fcc7c586ffca18e96c491cc5, putative proteorhodopsin gene, partial cds. KJ926849 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTGATTGGAATGGCTGGATGGTTGTATATCATCTATGAAATTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGCGGAAACGCTGCTGGTCAAGCTGCGTTTAATGCCTTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTGATTGGAATGGCTGGATGGTTGTATATCATCTATGAAATT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGC---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAT---GCCTTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926778 [IV-Alpha7-HOT2C01] PRGD_OTU003_101fe04793417dff160e936713d1bde6 gb|KJ926778| PRGD_OTU003_101fe04793417dff160e936713d1bde6, putative proteorhodopsin gene, partial cds. PRGD_OTU003_101fe04793417dff160e936713d1bde6, putative proteorhodopsin gene, partial cds. KJ926778 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAACGTAACGCTAGCCTTCGTAATTGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGTGAAGCAAGCAAGGCAAGCGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAATGCGTTGAGATTAATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AACGTA------------------ACGCTAGCC---TTCGTAATTGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGCGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAT---GCGTTG---AGATTAATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926796 [IV-Alpha7-HOT2C01] PRGD_OTU003_30d3ff8f43a7b1715641762e26908f5d gb|KJ926796| PRGD_OTU003_30d3ff8f43a7b1715641762e26908f5d, putative proteorhodopsin gene, partial cds. PRGD_OTU003_30d3ff8f43a7b1715641762e26908f5d, putative proteorhodopsin gene, partial cds. KJ926796 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-33.28, 45.35) TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATTGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAATGCTTTGAGATTAATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATTGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAT---GCTTTG---AGATTAATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926882 [IV-Alpha7-HOT2C01] PRGD_OTU003_bebcf28090269f1f14397f1c5bdaa253 gb|KJ926882| PRGD_OTU003_bebcf28090269f1f14397f1c5bdaa253, putative proteorhodopsin gene, partial cds. PRGD_OTU003_bebcf28090269f1f14397f1c5bdaa253, putative proteorhodopsin gene, partial cds. KJ926882 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTAGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATTGGAATGGCTGGATGGTTATACATCATCTATGAAATTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAATGCTGCTGGTCAGGCTGCGTTTAACGCTTTGAGATTAATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTAGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATTGGAATGGCTGGATGGTTATACATCATCTATGAAATT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAATGCTGCTGGT---CAG---GCT---GCG---TTT---AAC---GCTTTG---AGATTAATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926829 [IV-Alpha7-HOT2C01] PRGD_OTU003_703ca8ef82f8462d6a9d31bdf99ecff0 gb|KJ926829| PRGD_OTU003_703ca8ef82f8462d6a9d31bdf99ecff0, putative proteorhodopsin gene, partial cds. PRGD_OTU003_703ca8ef82f8462d6a9d31bdf99ecff0, putative proteorhodopsin gene, partial cds. KJ926829 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-23.5956, 69.0419) TTGATCACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCGGCAATAACTGCTGTTGCTTCAGGCTTATTCTGGAGGCTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTTGGTGAAGTCGGGGCGATGAATGTAACGCTAGCCTTCGTAATTGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGACAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAITAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCGGCA---------ATA---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGG---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTTGGTGAA---------GTC------------------GGG------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATTGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGA---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---I-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926906 [IV-Alpha7-HOT2C01] PRGD_OTU003_e0a93fb45d2517e92e1cc2a7c6c10b0a gb|KJ926906| PRGD_OTU003_e0a93fb45d2517e92e1cc2a7c6c10b0a, putative proteorhodopsin gene, partial cds. PRGD_OTU003_e0a93fb45d2517e92e1cc2a7c6c10b0a, putative proteorhodopsin gene, partial cds. KJ926906 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTTGGTGAAGTTGGGGCGATGAATGTAACGCTAGCCTTCGTAATTGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGACAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTTGGTGAA---------GTT------------------GGG------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATTGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGA---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926866 [IV-Alpha7-HOT2C01] PRGD_OTU003_acb0a3d40835f4c9c6ef5ebaa44c3a7d gb|KJ926866| PRGD_OTU003_acb0a3d40835f4c9c6ef5ebaa44c3a7d, putative proteorhodopsin gene, partial cds. PRGD_OTU003_acb0a3d40835f4c9c6ef5ebaa44c3a7d, putative proteorhodopsin gene, partial cds. KJ926866 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTGATTACTGTGCCTTTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGATTATTAATCGCATCAATAGTGATGTTGGTTGGTGGCTATCTAGGTGAAGTTGGAGCGATGAATGTAGTGCTAGCCTTCGTAATTGGAATGGCTGGATGGCTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGTAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCATTTAACGCTTTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVVLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCTTTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---TTATTAATCGCATCAATAGTGATGTTGGTTGGTGGCTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------GTGCTAGCC---TTCGTAATTGGAATGGCTGGATGGCTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGTAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCA---TTT---AAC---GCTTTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------VLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926847 [IV-Alpha7-HOT2C01] PRGD_OTU003_983f3e623c52e91796a5fd2deecad733 gb|KJ926847| PRGD_OTU003_983f3e623c52e91796a5fd2deecad733, putative proteorhodopsin gene, partial cds. PRGD_OTU003_983f3e623c52e91796a5fd2deecad733, putative proteorhodopsin gene, partial cds. KJ926847 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATTACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGATTATTAATCGCATCAATAGTGATGTTGGTTGGTGGCTATCTAGGTGAAGTTGGAGCGATGAATGTAGTGCTAGCCTTCGTAATTGGAATGGCTGGATGGCTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGTAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCTTTGAGATTGATCGTTACAGTT LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVVLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---TTATTAATCGCATCAATAGTGATGTTGGTTGGTGGCTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------GTGCTAGCC---TTCGTAATTGGAATGGCTGGATGGCTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGTAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCTTTG---AGATTGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------VLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926777 [IV-Alpha7-HOT2C01] PRGD_OTU003_0e56fc36546fb4ebfc9814743bb977a2 gb|KJ926777| PRGD_OTU003_0e56fc36546fb4ebfc9814743bb977a2, putative proteorhodopsin gene, partial cds. PRGD_OTU003_0e56fc36546fb4ebfc9814743bb977a2, putative proteorhodopsin gene, partial cds. KJ926777 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTGATTACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGATTATTAATCGCATCAATAGTGATGTTGGTTGGTGGCTATCTAGGTGAAGTTGGAGCGATGAATGTAGTGCTAGCCTTCGTAATTGGAATGGCTGGATGGCTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGTAAGGCAAGTGCTGGTAGTGGAAACGCTGCCGGTCAAGCTGCGTTTAACGCATTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVVLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---TTATTAATCGCATCAATAGTGATGTTGGTTGGTGGCTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------GTGCTAGCC---TTCGTAATTGGAATGGCTGGATGGCTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGTAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCCGGT---CAA---GCT---GCG---TTT---AAC---GCATTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------VLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926844 [IV-Alpha7-HOT2C01] PRGD_OTU003_8d9bf8b285208474e17333c82feefeff gb|KJ926844| PRGD_OTU003_8d9bf8b285208474e17333c82feefeff, putative proteorhodopsin gene, partial cds. PRGD_OTU003_8d9bf8b285208474e17333c82feefeff, putative proteorhodopsin gene, partial cds. KJ926844 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTGATTACTGTGCCTCTACAAATTGTAGAGTTTTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGATTATTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAGTGCTAGCCTTCGTAATTGGAATGGCTGGATGGCTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGTAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCATTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVVLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCTCTACAAATTGTAGAGTTTTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---TTATTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------GTGCTAGCC---TTCGTAATTGGAATGGCTGGATGGCTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGTAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCATTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------VLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926783 [IV-Alpha7-HOT2C01] PRGD_OTU003_1da9ecd7e5dbd48fabe9e8f01fae0d6c gb|KJ926783| PRGD_OTU003_1da9ecd7e5dbd48fabe9e8f01fae0d6c, putative proteorhodopsin gene, partial cds. PRGD_OTU003_1da9ecd7e5dbd48fabe9e8f01fae0d6c, putative proteorhodopsin gene, partial cds. KJ926783 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-33.28, 45.35) TTGATTACTGTGCCTCTACAAATTGTAGAGTTTTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGTTTATTCTGGAGACTATTAATAGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCAATGAATGTAACGCTAGCCTTCGTAATTGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAATGCTGCTGGTCAAGCTGCGTTCAACGCGTTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCTCTACAAATTGTAGAGTTTTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGTTTA------------------------------------TTCTGGAGA---CTATTAATAGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATTGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAATGCTGCTGGT---CAA---GCT---GCG---TTC---AAC---GCGTTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926878 [IV-Alpha7-HOT2C01] PRGD_OTU003_bc19cfc5370ba13a2452f1fe167f3375 gb|KJ926878| PRGD_OTU003_bc19cfc5370ba13a2452f1fe167f3375, putative proteorhodopsin gene, partial cds. PRGD_OTU003_bc19cfc5370ba13a2452f1fe167f3375, putative proteorhodopsin gene, partial cds. KJ926878 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACTGTGCCTCTACAAATCGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATAGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACACTAGCCTTCGTAATTGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTCAACGCGTTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATCGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATAGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTAGCC---TTCGTAATTGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTC---AAC---GCGTTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926869 [IV-Alpha7-HOT2C01] PRGD_OTU003_b11247f06472b2f934421ddb2b99183b gb|KJ926869| PRGD_OTU003_b11247f06472b2f934421ddb2b99183b, putative proteorhodopsin gene, partial cds. PRGD_OTU003_b11247f06472b2f934421ddb2b99183b, putative proteorhodopsin gene, partial cds. KJ926869 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Mediterranean Sea (33.762, 29.175; 33.935, 18.508), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73) CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGCTTGTTCTGGAGACTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGCTTG------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926821 [IV-Alpha7-HOT2C01] PRGD_OTU003_653aaaf845744c73d0a33d88007acfbd gb|KJ926821| PRGD_OTU003_653aaaf845744c73d0a33d88007acfbd, putative proteorhodopsin gene, partial cds. PRGD_OTU003_653aaaf845744c73d0a33d88007acfbd, putative proteorhodopsin gene, partial cds. KJ926821 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTGATCACTGTGCCTCTACAGATTGTAGAGTTTTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTAATCGCATCTATAGTGATGTTGGTTGGTGGTTACCTAGGTGAAGTTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTCAACGCGTTGAGATTGATCGTTACAGTT LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAGATTGTAGAGTTTTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCTATAGTGATGTTGGTTGGTGGTTACCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTC---AAC---GCGTTG---AGATTGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926919 [IV-Alpha7-HOT2C01] PRGD_OTU003_f711e619121ca2a54cc516cee016bb34 gb|KJ926919| PRGD_OTU003_f711e619121ca2a54cc516cee016bb34, putative proteorhodopsin gene, partial cds. PRGD_OTU003_f711e619121ca2a54cc516cee016bb34, putative proteorhodopsin gene, partial cds. KJ926919 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTGATCACTGTGCCTCTACAAATTGTAGAGTTTTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGAATGGCCGGATGGTTATACATCATCTATGAGATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTCAACGCGTTGAGATTGATCGTTACAGTT LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTTTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGAATGGCCGGATGGTTATACATCATCTATGAGATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTC---AAC---GCGTTG---AGATTGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926895 [IV-Alpha7-HOT2C01] PRGD_OTU003_d43a09752d36dc7dc1a9caf3ee3f5f5d gb|KJ926895| PRGD_OTU003_d43a09752d36dc7dc1a9caf3ee3f5f5d, putative proteorhodopsin gene, partial cds. PRGD_OTU003_d43a09752d36dc7dc1a9caf3ee3f5f5d, putative proteorhodopsin gene, partial cds. KJ926895 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACTGTGCCTCTACAAATTGTAGAGTTTTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGAATGGCCGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTCAACGCGTTGAGATTGATTGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTTTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGAATGGCCGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTC---AAC---GCGTTG---AGATTGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926916 [IV-Alpha7-HOT2C01] PRGD_OTU003_ede2940f9e4cacaf9d4ad81347365a46 gb|KJ926916| PRGD_OTU003_ede2940f9e4cacaf9d4ad81347365a46, putative proteorhodopsin gene, partial cds. PRGD_OTU003_ede2940f9e4cacaf9d4ad81347365a46, putative proteorhodopsin gene, partial cds. KJ926916 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAACTGCGTTCAATGCGTTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---ACT---GCG---TTC---AAT---GCGTTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926884 [IV-Alpha7-HOT2C01] PRGD_OTU003_c1cf3d83fa431a1b6a4d3f0b37593c93 gb|KJ926884| PRGD_OTU003_c1cf3d83fa431a1b6a4d3f0b37593c93, putative proteorhodopsin gene, partial cds. PRGD_OTU003_c1cf3d83fa431a1b6a4d3f0b37593c93, putative proteorhodopsin gene, partial cds. KJ926884 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTAATCGCATCTATAGTGATGCTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTCAACGCGTTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCTATAGTGATGCTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTC---AAC---GCGTTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926788 [IV-Alpha7-HOT2C01] PRGD_OTU003_224bf9eaf136d229bc4b0efe80bc9d98 gb|KJ926788| PRGD_OTU003_224bf9eaf136d229bc4b0efe80bc9d98, putative proteorhodopsin gene, partial cds. PRGD_OTU003_224bf9eaf136d229bc4b0efe80bc9d98, putative proteorhodopsin gene, partial cds. KJ926788 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTGATTACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACTCTGGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAGGCAAGCAAGGCAAGTGCTGGTAGTGGAAATGCTGCTGGTCAAGCTGCGTTCAACGCGTTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTGGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAGGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAATGCTGCTGGT---CAA---GCT---GCG---TTC---AAC---GCGTTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926879 [IV-Alpha7-HOT2C01] PRGD_OTU003_bc5dabd7d938af888e7dcb30ef41dd60 gb|KJ926879| PRGD_OTU003_bc5dabd7d938af888e7dcb30ef41dd60, putative proteorhodopsin gene, partial cds. PRGD_OTU003_bc5dabd7d938af888e7dcb30ef41dd60, putative proteorhodopsin gene, partial cds. KJ926879 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATTACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCCTATTCTGGAGACTGTTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTACGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAATGCTGCTGGTCAAGCTGCGTTCAATGCGTTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCCTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTACGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAATGCTGCTGGT---CAA---GCT---GCG---TTC---AAT---GCGTTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926901 [IV-Alpha7-HOT2C01] PRGD_OTU003_de3c56378fd365be31b3fc3fbee10952 gb|KJ926901| PRGD_OTU003_de3c56378fd365be31b3fc3fbee10952, putative proteorhodopsin gene, partial cds. PRGD_OTU003_de3c56378fd365be31b3fc3fbee10952, putative proteorhodopsin gene, partial cds. KJ926901 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Atlantic side (71.501, 19.8025), Indian Ocean (-23.5956, 69.0419) TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGGCTATTAATCGCATCTATAGTGATGTTGGTTGGAGGTTATCTCGGTGAAGTTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAATGCTGCTGGTCAAGCTGCGTTCAACGCGTTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGG---CTATTAATCGCATCTATAGTGATGTTGGTTGGAGGTTATCTCGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAATGCTGCTGGT---CAA---GCT---GCG---TTC---AAC---GCGTTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926781 [IV-Alpha7-HOT2C01] PRGD_OTU003_1678cf35fc132d0ea81f31b6cd05ef88 gb|KJ926781| PRGD_OTU003_1678cf35fc132d0ea81f31b6cd05ef88, putative proteorhodopsin gene, partial cds. PRGD_OTU003_1678cf35fc132d0ea81f31b6cd05ef88, putative proteorhodopsin gene, partial cds. KJ926781 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCTGGCTTATTCTGGAGACTGTTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTCAACGCGTTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCT---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTC---AAC---GCGTTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926848 [IV-Alpha7-HOT2C01] PRGD_OTU003_99a0c31f33a6034bf51e849e10fc2f84 gb|KJ926848| PRGD_OTU003_99a0c31f33a6034bf51e849e10fc2f84, putative proteorhodopsin gene, partial cds. PRGD_OTU003_99a0c31f33a6034bf51e849e10fc2f84, putative proteorhodopsin gene, partial cds. KJ926848 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTTGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTCAACGCGTTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTTGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTC---AAC---GCGTTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926865 [IV-Alpha7-HOT2C01] PRGD_OTU003_ac2064df91d9d730b4f64d0ec4184f06 gb|KJ926865| PRGD_OTU003_ac2064df91d9d730b4f64d0ec4184f06, putative proteorhodopsin gene, partial cds. PRGD_OTU003_ac2064df91d9d730b4f64d0ec4184f06, putative proteorhodopsin gene, partial cds. KJ926865 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Mediterranean Sea (33.762, 29.175) TTGATTACTGTGCCTCTGCAAATCGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGTTTATTCTGGAGGTTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCTTTCAACGCGTTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCTCTGCAAATCGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGTTTA------------------------------------TTCTGGAGG---TTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCT---TTC---AAC---GCGTTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926861 [IV-Alpha7-HOT2C01] PRGD_OTU003_aa474fbe9f6aa4b90f6d987cb4e905d0 gb|KJ926861| PRGD_OTU003_aa474fbe9f6aa4b90f6d987cb4e905d0, putative proteorhodopsin gene, partial cds. PRGD_OTU003_aa474fbe9f6aa4b90f6d987cb4e905d0, putative proteorhodopsin gene, partial cds. KJ926861 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTCTTAATCGCATCTATAGTGATGTTGGTTGGCGGTTACCTAGGTGAAGTTGGAGCGATGGATGTAATTCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCCGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMDVILAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTCTTAATCGCATCTATAGTGATGTTGGTTGGCGGTTACCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------GATGTA------------------ATTCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCCGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------DV------ILA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926899 [IV-Alpha7-HOT2C01] PRGD_OTU003_d9d1da74ed34da96c89d2d007b833df0 gb|KJ926899| PRGD_OTU003_d9d1da74ed34da96c89d2d007b833df0, putative proteorhodopsin gene, partial cds. PRGD_OTU003_d9d1da74ed34da96c89d2d007b833df0, putative proteorhodopsin gene, partial cds. KJ926899 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGTTTATTCTGGAGACTCTTAATCGCTTCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACTCTAGCCTTTGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTCACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGTTTA------------------------------------TTCTGGAGA---CTCTTAATCGCTTCTATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTTGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTCACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926860 [IV-Alpha7-HOT2C01] PRGD_OTU003_a799f24ef7dabcbd5d24d9a7d2821fe0 gb|KJ926860| PRGD_OTU003_a799f24ef7dabcbd5d24d9a7d2821fe0, putative proteorhodopsin gene, partial cds. PRGD_OTU003_a799f24ef7dabcbd5d24d9a7d2821fe0, putative proteorhodopsin gene, partial cds. KJ926860 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACAGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGTTTATTCTGGAGACTTTTAATCGCATCAATAGTGATGTTGGTTGGAGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTTATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGTTTA------------------------------------TTCTGGAGA---CTTTTAATCGCATCAATAGTGATGTTGGTTGGAGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTTATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926876 [IV-Alpha7-HOT2C01] PRGD_OTU003_babe70f298121e4d56f6cd5efc1355c6 gb|KJ926876| PRGD_OTU003_babe70f298121e4d56f6cd5efc1355c6, putative proteorhodopsin gene, partial cds. PRGD_OTU003_babe70f298121e4d56f6cd5efc1355c6, putative proteorhodopsin gene, partial cds. KJ926876 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACAGTGCCTCTACAAATTGTAGAGTTTTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATTGCATCAATAGTGATGTTAGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGTTAGCCTTCGTTATAGGAATGGCTGGATGGCTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGCGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGCTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCTCTACAAATTGTAGAGTTTTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAGTGATGTTAGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGTTAGCC---TTCGTTATAGGAATGGCTGGATGGCTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGC---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGCTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926834 [IV-Alpha7-HOT2C01] PRGD_OTU003_7d12b31544ebcef558c90c01db3c6763 gb|KJ926834| PRGD_OTU003_7d12b31544ebcef558c90c01db3c6763, putative proteorhodopsin gene, partial cds. PRGD_OTU003_7d12b31544ebcef558c90c01db3c6763, putative proteorhodopsin gene, partial cds. KJ926834 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), Indian Ocean (-33.28, 45.35) TTGATCACTGTGCCTCTACAAATTGTAGAGTTTTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTTTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATTTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATTGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTTTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTTTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATTTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926841 [IV-Alpha7-HOT2C01] PRGD_OTU003_867cda72dd4d123e5bd7f044ba26fe45 gb|KJ926841| PRGD_OTU003_867cda72dd4d123e5bd7f044ba26fe45, putative proteorhodopsin gene, partial cds. PRGD_OTU003_867cda72dd4d123e5bd7f044ba26fe45, putative proteorhodopsin gene, partial cds. KJ926841 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTGATCACAGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTATTAATCGCATCAATAGTGATGTTAGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCATTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTATTAATCGCATCAATAGTGATGTTAGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCATTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926857 [IV-Alpha7-HOT2C01] PRGD_OTU003_a6557714056df05ad34d4705f522f5d2 gb|KJ926857| PRGD_OTU003_a6557714056df05ad34d4705f522f5d2, putative proteorhodopsin gene, partial cds. PRGD_OTU003_a6557714056df05ad34d4705f522f5d2, putative proteorhodopsin gene, partial cds. KJ926857 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGAGAAGTTGGAGCGATGAATGTAACACTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCATTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGAGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCATTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926793 [IV-Alpha7-HOT2C01] PRGD_OTU003_2b8d138868dbac80dad9f112ee9dc43f gb|KJ926793| PRGD_OTU003_2b8d138868dbac80dad9f112ee9dc43f, putative proteorhodopsin gene, partial cds. PRGD_OTU003_2b8d138868dbac80dad9f112ee9dc43f, putative proteorhodopsin gene, partial cds. KJ926793 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) TTGATCACAGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCAGTTGCTTCTGGTTTATTCTGGAGACTATTAATCGCATCAATAGTGATGTTAGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAACTGCGTTTAACGCGTTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCAGTTGCTTCT---GGTTTA------------------------------------TTCTGGAGA---CTATTAATCGCATCAATAGTGATGTTAGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---ACT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926840 [IV-Alpha7-HOT2C01] PRGD_OTU003_85885609cb5bfc79bfbdcc1cbf65619f gb|KJ926840| PRGD_OTU003_85885609cb5bfc79bfbdcc1cbf65619f, putative proteorhodopsin gene, partial cds. PRGD_OTU003_85885609cb5bfc79bfbdcc1cbf65619f, putative proteorhodopsin gene, partial cds. KJ926840 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) TTGATCACGGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCTGGTTTATTCTGGAGACTATTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAAATTTTTGCAGGTGAAGCAAGTAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGACTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACGGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCT---GGTTTA------------------------------------TTCTGGAGA---CTATTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATACATCATCTATGAAATT---------------TTT------GCA---GGTGAAGCAAGTAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGACTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926883 [IV-Alpha7-HOT2C01] PRGD_OTU003_c0531816f27d31691112691b0c3b54a8 gb|KJ926883| PRGD_OTU003_c0531816f27d31691112691b0c3b54a8, putative proteorhodopsin gene, partial cds. PRGD_OTU003_c0531816f27d31691112691b0c3b54a8, putative proteorhodopsin gene, partial cds. KJ926883 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACAGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGTTTATTCTGGAGACTATTAATCGCATCAATAGTAATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACACTAGCCTTCGTAATTGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCGTTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGTTTA------------------------------------TTCTGGAGA---CTATTAATCGCATCAATAGTAATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTAGCC---TTCGTAATTGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926806 [IV-Alpha7-HOT2C01] PRGD_OTU003_41aaa97751c1b0bf92350a473ffccd5d gb|KJ926806| PRGD_OTU003_41aaa97751c1b0bf92350a473ffccd5d, putative proteorhodopsin gene, partial cds. PRGD_OTU003_41aaa97751c1b0bf92350a473ffccd5d, putative proteorhodopsin gene, partial cds. KJ926806 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACTGTGCCTCTACAAATTGTAGAGTTTTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGTTTATTTTGGAGACTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGAGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGAGAAGCTAGTAAGGCAAGTGCTGGTAGCGGAAACGCTGCTGGTCAAACTGCGTTTAACGCATTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTTTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGTTTA------------------------------------TTTTGGAGA---CTGTTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGAGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCTAGTAAGGCAAGTGCTGGT------AGC---GGAAACGCTGCTGGT---CAA---ACT---GCG---TTT---AAC---GCATTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926838 [IV-Alpha7-HOT2C01] PRGD_OTU003_81e050b5c6c030629ce7900e859e21ce gb|KJ926838| PRGD_OTU003_81e050b5c6c030629ce7900e859e21ce, putative proteorhodopsin gene, partial cds. PRGD_OTU003_81e050b5c6c030629ce7900e859e21ce, putative proteorhodopsin gene, partial cds. KJ926838 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCAGGTTTATTCTGGAGACTATTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAATGCTGCCGGTCAAACTGCGTTTAACGCATTGAGATTAATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCA---GGTTTA------------------------------------TTCTGGAGA---CTATTAATCGCATCAATAGTGATGTTGGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAATGCTGCCGGT---CAA---ACT---GCG---TTT---AAC---GCATTG---AGATTAATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926839 [IV-Alpha7-HOT2C01] PRGD_OTU003_83f0263a14029d4f7bdfa9a450fee74a gb|KJ926839| PRGD_OTU003_83f0263a14029d4f7bdfa9a450fee74a, putative proteorhodopsin gene, partial cds. PRGD_OTU003_83f0263a14029d4f7bdfa9a450fee74a, putative proteorhodopsin gene, partial cds. KJ926839 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCAGCAATGACTGCTGTTGCTTCAGGTTTATTCTGGAGACTATTAATCGCATCAATAGTGATGTTAGTTGGTGGTTATCTAGGTGAAGTCGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGGTGGTTATACATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAACTGCGTTCAACGCATTGAGATTAATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCAGCA---------ATG---ACTGCTGTTGCTTCA---GGTTTA------------------------------------TTCTGGAGA---CTATTAATCGCATCAATAGTGATGTTAGTTGGTGGTTATCTAGGTGAA---------GTC------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGGTGGTTATACATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---ACT---GCG---TTC---AAC---GCATTG---AGATTAATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926787 [IV-Alpha7-HOT2C01] PRGD_OTU003_20bbd9028fc4d701308302b629b3641b gb|KJ926787| PRGD_OTU003_20bbd9028fc4d701308302b629b3641b, putative proteorhodopsin gene, partial cds. PRGD_OTU003_20bbd9028fc4d701308302b629b3641b, putative proteorhodopsin gene, partial cds. KJ926787 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCAATGACTGCTGTTGCTTCAGGACTATTCTGGAGACTACTAATTGCATCAATCGTGATGTTGGTTGGTGGATATCTGGGTGAAGTCGGAGCAATGAATGTAACGCTAGCCTTCGTAATCGGAATGGCTGGATGGTTATATATCATCTACGAAATTTTTGCAGGTGAAGCAAGTAAGGCAAGTGCCGGTAGTGGAAACGCAGCTGGTCAAACTGCATTTAACGCCTTGAGATTAATCGTTACCGTT LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCA---------ATG---ACTGCTGTTGCTTCA---GGACTA------------------------------------TTCTGGAGA---CTACTAATTGCATCAATCGTGATGTTGGTTGGTGGATATCTGGGTGAA---------GTC------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATCGGAATGGCTGGATGGTTATATATCATCTACGAAATT---------------TTT------GCA---GGTGAAGCAAGTAAGGCAAGTGCCGGT------AGT---GGAAACGCAGCTGGT---CAA---ACT---GCA---TTT---AAC---GCCTTG---AGATTAATCGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926835 [IV-Alpha7-HOT2C01] PRGD_OTU003_7ddeef122b10a0e3e8d6658d13c5021f gb|KJ926835| PRGD_OTU003_7ddeef122b10a0e3e8d6658d13c5021f, putative proteorhodopsin gene, partial cds. PRGD_OTU003_7ddeef122b10a0e3e8d6658d13c5021f, putative proteorhodopsin gene, partial cds. KJ926835 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTGATTACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCAATGACTGCTGTTGCTTCAGGCCTATTCTGGAGACTACTAATTGCATCAATTGTGATGTTGGTTGGTGGATATCTCGGTGAAGTCGGAGCAATGAATGTAACGCTAGCCTTCGTAATCGGAATGGCTGGATGGTTATATATCATCTACGAAATTTTTGCAGGTGAAGCAAGTAAGGCAAGTGCCGGTAGTGGAAACGCAGCTGGTCAAACTGCATTTAACGCCTTGAGATTAATCGTTACCGTT LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCA---------ATG---ACTGCTGTTGCTTCA---GGCCTA------------------------------------TTCTGGAGA---CTACTAATTGCATCAATTGTGATGTTGGTTGGTGGATATCTCGGTGAA---------GTC------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATCGGAATGGCTGGATGGTTATATATCATCTACGAAATT---------------TTT------GCA---GGTGAAGCAAGTAAGGCAAGTGCCGGT------AGT---GGAAACGCAGCTGGT---CAA---ACT---GCA---TTT---AAC---GCCTTG---AGATTAATCGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926822 [IV-Alpha7-HOT2C01] PRGD_OTU003_66974fb494aedc68e30392d388a09c06 gb|KJ926822| PRGD_OTU003_66974fb494aedc68e30392d388a09c06, putative proteorhodopsin gene, partial cds. PRGD_OTU003_66974fb494aedc68e30392d388a09c06, putative proteorhodopsin gene, partial cds. KJ926822 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) TTGATTACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCAATGACCGCTGTTGCTTCAGGCTTATTCTGGAGATTACTAATTGCATCAGTAGTGATGTTGGTTGGTGGATATCTTGGTGAAGTCGGGGCAATGAATGTAACGCTAGCCTTCGTAATCGGAATGGCTGGATGGTTATATATCATCTATGAAATATTTGCAGGTGAAGCAAGTAAGGCAAGTGCAGGTAGTGGAAACGCTGCTGGTCAAACTGCGTTTAACGCCTTGAGATTAATCGTTACCGTT LITVPLQIVEFYVILAAMTAVASGLFWRLLIASVVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCA---------ATG---ACCGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---TTACTAATTGCATCAGTAGTGATGTTGGTTGGTGGATATCTTGGTGAA---------GTC------------------GGG------GCA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATCGGAATGGCTGGATGGTTATATATCATCTATGAAATA---------------TTT------GCA---GGTGAAGCAAGTAAGGCAAGTGCAGGT------AGT---GGAAACGCTGCTGGT---CAA---ACT---GCG---TTT---AAC---GCCTTG---AGATTAATCGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASVVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926909 [IV-Alpha7-HOT2C01] PRGD_OTU003_e544668aff09087612aab28dff3d79be gb|KJ926909| PRGD_OTU003_e544668aff09087612aab28dff3d79be, putative proteorhodopsin gene, partial cds. PRGD_OTU003_e544668aff09087612aab28dff3d79be, putative proteorhodopsin gene, partial cds. KJ926909 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) TTGATCACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCAATGACCGCCGTTGCTTCAGGCTTATTCTGGAGATTGCTAATTGCATCAGTAGTGATGTTGGTTGGTGGATATCTTGGTGAAGTCGGGGCAATGAATGTAACGCTAGCCTTCGTAATCGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGTGAAGCAAGTAAGGCAAGTGCAGGTAGTGGAAACGCAGCTGGTCAAACTGCGTTTAACGCCTTAAGATTAATCGTTACCGTT LITVPLQIVEFYVILAAMTAVASGLFWRLLIASVVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCA---------ATG---ACCGCCGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---TTGCTAATTGCATCAGTAGTGATGTTGGTTGGTGGATATCTTGGTGAA---------GTC------------------GGG------GCA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATCGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGTGAAGCAAGTAAGGCAAGTGCAGGT------AGT---GGAAACGCAGCTGGT---CAA---ACT---GCG---TTT---AAC---GCCTTA---AGATTAATCGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASVVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926802 [IV-Alpha7-HOT2C01] PRGD_OTU003_3c434a088b095abe5346356a66c159fe gb|KJ926802| PRGD_OTU003_3c434a088b095abe5346356a66c159fe, putative proteorhodopsin gene, partial cds. PRGD_OTU003_3c434a088b095abe5346356a66c159fe, putative proteorhodopsin gene, partial cds. KJ926802 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175; 33.935, 18.508), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGATTACTAATCGCATCAATTGTGATGTTAGTTGGTGGATATCTCGGTGAAGTCGGAGCAATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGTGAAGCAAGTAAAGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCCTTGAGATTAATCGTTACCGTT LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---TTACTAATCGCATCAATTGTGATGTTAGTTGGTGGATATCTCGGTGAA---------GTC------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGTGAAGCAAGTAAAGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCCTTG---AGATTAATCGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926877 [IV-Alpha7-HOT2C01] PRGD_OTU003_bbb207c66384619668e3da71b9abe06f gb|KJ926877| PRGD_OTU003_bbb207c66384619668e3da71b9abe06f, putative proteorhodopsin gene, partial cds. PRGD_OTU003_bbb207c66384619668e3da71b9abe06f, putative proteorhodopsin gene, partial cds. KJ926877 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) TTGATCACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTACTAATCGCATCAATTGTGATGTTAGTTGGTGGATATCTAGGTGAAGTCGGAGCAATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGTGAAGCAAGTAAAGCAAGTGCTGGTAGTGGAAACGCTGCAGGTCAAACTGCATTTAACGCCTTGAGATTAATCGTTACTGTT LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTACTAATCGCATCAATTGTGATGTTAGTTGGTGGATATCTAGGTGAA---------GTC------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGTGAAGCAAGTAAAGCAAGTGCTGGT------AGT---GGAAACGCTGCAGGT---CAA---ACT---GCA---TTT---AAC---GCCTTG---AGATTAATCGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926843 [IV-Alpha7-HOT2C01] PRGD_OTU003_8b347ac22cfa3e90dc586830205c95ae gb|KJ926843| PRGD_OTU003_8b347ac22cfa3e90dc586830205c95ae, putative proteorhodopsin gene, partial cds. PRGD_OTU003_8b347ac22cfa3e90dc586830205c95ae, putative proteorhodopsin gene, partial cds. KJ926843 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Pacific side (69.5142, -133.4185) TTGATCACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCAATGACTGCTGTTGCTTCAGGCTTATTCTGGAGACTACTAATCGCATCAATTGTGATGTTAGTTGGTGGATATCTAGGTGAAGTCGGAGCAATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATTTTTGCAGGTGAAGCAAGTAAGGCAAGTGCAGGCAGTGGAAATGCTGCTGGTCAAACTGCGTTTAACGCCTTGAGATTAATCGTTACCGTT LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTA------------------------------------TTCTGGAGA---CTACTAATCGCATCAATTGTGATGTTAGTTGGTGGATATCTAGGTGAA---------GTC------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAATT---------------TTT------GCA---GGTGAAGCAAGTAAGGCAAGTGCAGGC------AGT---GGAAATGCTGCTGGT---CAA---ACT---GCG---TTT---AAC---GCCTTG---AGATTAATCGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926826 [IV-Alpha7-HOT2C01] PRGD_OTU003_6a6bc63ce8a6dc567b9a7f73192f068d gb|KJ926826| PRGD_OTU003_6a6bc63ce8a6dc567b9a7f73192f068d, putative proteorhodopsin gene, partial cds. PRGD_OTU003_6a6bc63ce8a6dc567b9a7f73192f068d, putative proteorhodopsin gene, partial cds. KJ926826 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCAATGACTGCTGTTGCTTCAGGCTTGTTCTGGAGATTGCTAATTGCATCAATTGTGATGTTAGTTGGCGGTTATCTGGGTGAAGTCGGAGCAATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTACGAAATTTTTGCAGGTGAAGCAAGTAAAGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAACTGCGTTTAACGCCTTGAGATTAATTGTTACAGTT LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTG------------------------------------TTCTGGAGA---TTGCTAATTGCATCAATTGTGATGTTAGTTGGCGGTTATCTGGGTGAA---------GTC------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTACGAAATT---------------TTT------GCA---GGTGAAGCAAGTAAAGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---ACT---GCG---TTT---AAC---GCCTTG---AGATTAATTGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926903 [IV-Alpha7-HOT2C01] PRGD_OTU003_ded9baca49e5e55831530751c9b6cff4 gb|KJ926903| PRGD_OTU003_ded9baca49e5e55831530751c9b6cff4, putative proteorhodopsin gene, partial cds. PRGD_OTU003_ded9baca49e5e55831530751c9b6cff4, putative proteorhodopsin gene, partial cds. KJ926903 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTGATCACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCAATGACTGCTGTTGCTTCAGGCTTGTTCTGGAGATTGCTAATTGCATCAATTGTGATGTTAGTCGGCGGTTATCTAGGTGAAGTCGGAGCAATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTACGAAATTTTTGCAGGTGAAGCAAGTAAAGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAACTGCATTTAACGCCTTGAGATTAATTGTTACAGTT LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTG------------------------------------TTCTGGAGA---TTGCTAATTGCATCAATTGTGATGTTAGTCGGCGGTTATCTAGGTGAA---------GTC------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTACGAAATT---------------TTT------GCA---GGTGAAGCAAGTAAAGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---ACT---GCA---TTT---AAC---GCCTTG---AGATTAATTGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926880 [IV-Alpha7-HOT2C01] PRGD_OTU003_bc7d851424c4fd932ee17a9d38c0d516 gb|KJ926880| PRGD_OTU003_bc7d851424c4fd932ee17a9d38c0d516, putative proteorhodopsin gene, partial cds. PRGD_OTU003_bc7d851424c4fd932ee17a9d38c0d516, putative proteorhodopsin gene, partial cds. KJ926880 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCAATGACTGCTGTTGCTTCAGGCTTGTTCTGGAGATTGTTAATTGCATCAATTGTGATGTTAGTTGGCGGTTATCTAGGTGAAGTCGGAGCAATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTACGAAATTTTTGCAGGTGAAGCAAGTAAAGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTTAACGCCTTGAGATTAATCGTTACCGTT LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCA---------ATG---ACTGCTGTTGCTTCA---GGCTTG------------------------------------TTCTGGAGA---TTGTTAATTGCATCAATTGTGATGTTAGTTGGCGGTTATCTAGGTGAA---------GTC------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTACGAAATT---------------TTT------GCA---GGTGAAGCAAGTAAAGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTT---AAC---GCCTTG---AGATTAATCGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926808 [IV-Alpha7-HOT2C01] PRGD_OTU003_44e3b33d83b9d8373d84b44f91c1496b gb|KJ926808| PRGD_OTU003_44e3b33d83b9d8373d84b44f91c1496b, putative proteorhodopsin gene, partial cds. PRGD_OTU003_44e3b33d83b9d8373d84b44f91c1496b, putative proteorhodopsin gene, partial cds. KJ926808 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTGATCACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCAATGACTGCTGTTGCTTCAGGCCTATTCTGGAGACTACTAATTGCATCAATTGTGATGTTGGTTGGTGGATATCTGGGTGAAGTCGGAGCAATGAATGTAACGCTAGCCTTCGTAATAGGAATGGCTGGATGGCTATATATCATCTACGAAATTTTTGCAGGTGAAGCAAGTAAGGCAAGTGCTGGTAGTGGAAACGCAGCTGGTCAAACTGCATTTAACGCCTTGAGATTAATTGTTACCGTT LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCA---------ATG---ACTGCTGTTGCTTCA---GGCCTA------------------------------------TTCTGGAGA---CTACTAATTGCATCAATTGTGATGTTGGTTGGTGGATATCTGGGTGAA---------GTC------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGAATGGCTGGATGGCTATATATCATCTACGAAATT---------------TTT------GCA---GGTGAAGCAAGTAAGGCAAGTGCTGGT------AGT---GGAAACGCAGCTGGT---CAA---ACT---GCA---TTT---AAC---GCCTTG---AGATTAATTGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ929137 [IV-Alpha7-HOT2C01] PRGD_OTU079_4dc121d551cae6616e2ee7db073b8548 gb|KJ929137| PRGD_OTU079_4dc121d551cae6616e2ee7db073b8548, putative proteorhodopsin gene, partial cds. PRGD_OTU079_4dc121d551cae6616e2ee7db073b8548, putative proteorhodopsin gene, partial cds. KJ929137 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (76.3333, 14.8833) TTAATTACAGTTCCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCTGTTACTAATGTTTCATCTTCAGTATTCTGGAAATTACTAATCGCATCTACTATCATGCTAGTATTCGGATACCTGGGTGAGTCAGGAGAGATGAATGTAATGACTGCATTTGTTATCGGAATGGCAGCTTGGTTATACATGATCTACGAAATCTTTGCAGGTGAAGCAGGACAAGCAAGTGCAAACAGTGGCAATGGCCCAGCACAAACTGCTTTTAATGCACTAAGATTAATCGTGACTGTT LITVPILMVEFYIILKAVTNVSSSVFWKLLIASTIMLVFGYLGESGEMNVMTAFVIGMAAWLYMIYEIFAGEAGQASANSGNGPAQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCT---------GTT---ACTAATGTTTCATCT---TCAGTA------------------------------------TTCTGGAAA---TTACTAATCGCATCTACTATCATGCTAGTATTCGGATACCTGGGTGAG---------TCA------------------GGA------GAG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ATGACTGCA---TTTGTTATCGGAATGGCAGCTTGGTTATACATGATCTACGAAATC---------------TTT------GCA---GGTGAAGCAGGACAAGCAAGTGCAAAC------AGT---GGCAATGGCCCAGCA---CAA---ACT---GCT---TTT---AAT---GCACTA---AGATTAATCGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPILMVEFYIILKA---V-TNVSS-SV------------FWK-LLIASTIMLVFGYLGE---S------G--E-----------M----------------------NV------MTA-FVIGMAAWLYMIYEI-----F--A-GEAGQASAN--S-GNGPA-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ929134 [IV-Alpha7-HOT2C01] PRGD_OTU079_otuREP_35616599c5e35547bcb2ba29b89aab62 gb|KJ929134| PRGD_OTU079_otuREP_35616599c5e35547bcb2ba29b89aab62, putative proteorhodopsin gene, partial cds. PRGD_OTU079_otuREP_35616599c5e35547bcb2ba29b89aab62, putative proteorhodopsin gene, partial cds. KJ929134 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATTACAGTTCCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCTGTAACTAATGTTTCATCTTCAGTATTCTGGAAATTACTAATCGCATCTACTATCATGCTAGTATTCGGATACATGGGTGAGTCAGGAATGATGAATGTAATGACTGCATTTGTTATCGGAATGGCAGCTTGGTTATACATGATCTACGAAATCTTTGCAGGTGAAGCAGGACAAGCAAGTGCAAACAGTGGCAATGGCCCAGCACAAACTGCTTTTAATGCACTAAGATTAATCGTGACTGTT LITVPILMVEFYIILKAVTNVSSSVFWKLLIASTIMLVFGYMGESGMMNVMTAFVIGMAAWLYMIYEIFAGEAGQASANSGNGPAQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCT---------GTA---ACTAATGTTTCATCT---TCAGTA------------------------------------TTCTGGAAA---TTACTAATCGCATCTACTATCATGCTAGTATTCGGATACATGGGTGAG---------TCA------------------GGA------ATG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ATGACTGCA---TTTGTTATCGGAATGGCAGCTTGGTTATACATGATCTACGAAATC---------------TTT------GCA---GGTGAAGCAGGACAAGCAAGTGCAAAC------AGT---GGCAATGGCCCAGCA---CAA---ACT---GCT---TTT---AAT---GCACTA---AGATTAATCGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPILMVEFYIILKA---V-TNVSS-SV------------FWK-LLIASTIMLVFGYMGE---S------G--M-----------M----------------------NV------MTA-FVIGMAAWLYMIYEI-----F--A-GEAGQASAN--S-GNGPA-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ929135 [IV-Alpha7-HOT2C01] PRGD_OTU079_3d947f43a6499dbdfbcde9d5f2c51015 gb|KJ929135| PRGD_OTU079_3d947f43a6499dbdfbcde9d5f2c51015, putative proteorhodopsin gene, partial cds. PRGD_OTU079_3d947f43a6499dbdfbcde9d5f2c51015, putative proteorhodopsin gene, partial cds. KJ929135 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; ; 67.49, -168.12), Indian Ocean (-35.05, 23.73) TTAATTACAGTTCCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCTGTAACTAATGTTTCATCTTCAGTGTTCTGGAAATTACTAATCGCGTCTACTATCATGCTAGTATTTGGATACATGGGTGAGTCAGGAATGATGAATGTAATGACTGCATTTGTTGTTGGTATGGCAGCTTGGTTATATATGATCTACGAAATCTTTGCAGGTGAAGCAGGACAAGCAAGTGCAAACAGTGGCAATGGCCCAGCACAAACTGCTTTTAATGCACTAAGATTAATCGTGACTGTT LITVPILMVEFYIILKAVTNVSSSVFWKLLIASTIMLVFGYMGESGMMNVMTAFVVGMAAWLYMIYEIFAGEAGQASANSGNGPAQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCT---------GTA---ACTAATGTTTCATCT---TCAGTG------------------------------------TTCTGGAAA---TTACTAATCGCGTCTACTATCATGCTAGTATTTGGATACATGGGTGAG---------TCA------------------GGA------ATG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ATGACTGCA---TTTGTTGTTGGTATGGCAGCTTGGTTATATATGATCTACGAAATC---------------TTT------GCA---GGTGAAGCAGGACAAGCAAGTGCAAAC------AGT---GGCAATGGCCCAGCA---CAA---ACT---GCT---TTT---AAT---GCACTA---AGATTAATCGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPILMVEFYIILKA---V-TNVSS-SV------------FWK-LLIASTIMLVFGYMGE---S------G--M-----------M----------------------NV------MTA-FVVGMAAWLYMIYEI-----F--A-GEAGQASAN--S-GNGPA-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ929136 [IV-Alpha7-HOT2C01] PRGD_OTU079_46a9d0d40abc5512d0e87e9d6d73d310 gb|KJ929136| PRGD_OTU079_46a9d0d40abc5512d0e87e9d6d73d310, putative proteorhodopsin gene, partial cds. PRGD_OTU079_46a9d0d40abc5512d0e87e9d6d73d310, putative proteorhodopsin gene, partial cds. KJ929136 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683) TTGATTACAGTTCCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCTGTAACTAATGTTTCATCTGCAGTGTTCTGGAAATTACTAATTGCATCTACAATAATGCTAGTATTTGGATACATGGGTGAGTCAGGAATAATGAATGTAATGACTGCATTTGTTATCGGAATGGCAGCTTGGTTATATATGATCTACGAAATCTTTGCAGGTGAAGCAGGACAAGCAAGTGCAAACAGTGGCAATGGCCCAGCACAAACTGCTTTTAATGCACTAAGATTAATCGTGACTGTT LITVPILMVEFYIILKAVTNVSSAVFWKLLIASTIMLVFGYMGESGIMNVMTAFVIGMAAWLYMIYEIFAGEAGQASANSGNGPAQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACAGTTCCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCT---------GTA---ACTAATGTTTCATCT---GCAGTG------------------------------------TTCTGGAAA---TTACTAATTGCATCTACAATAATGCTAGTATTTGGATACATGGGTGAG---------TCA------------------GGA------ATA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ATGACTGCA---TTTGTTATCGGAATGGCAGCTTGGTTATATATGATCTACGAAATC---------------TTT------GCA---GGTGAAGCAGGACAAGCAAGTGCAAAC------AGT---GGCAATGGCCCAGCA---CAA---ACT---GCT---TTT---AAT---GCACTA---AGATTAATCGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPILMVEFYIILKA---V-TNVSS-AV------------FWK-LLIASTIMLVFGYMGE---S------G--I-----------M----------------------NV------MTA-FVIGMAAWLYMIYEI-----F--A-GEAGQASAN--S-GNGPA-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ929138 [IV-Alpha7-HOT2C01] PRGD_OTU079_5edf7da7f6bc64e6df3cc0f9e4c3c73c gb|KJ929138| PRGD_OTU079_5edf7da7f6bc64e6df3cc0f9e4c3c73c, putative proteorhodopsin gene, partial cds. PRGD_OTU079_5edf7da7f6bc64e6df3cc0f9e4c3c73c, putative proteorhodopsin gene, partial cds. KJ929138 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185) TTGATTACAGTTCCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCTGTAACTAATGTTTCATCTGCAGTGTTCTGGAAATTACTAATTGCATCTACAATAATGCTAGTATTTGGATACATGGGTGAGTCAGGGATAATGAATGTAATGACTGCATTTGTTATCGGAATGGCAGCTTGGTTATACATGATCTACGAAATCTTTGCAGGTGAAGCAGGACAAGCAAGTGCTAACAGTGGCAATGGCCCAGCACAAACTGCTTTTAATGCGCTAAGATTAATCGTGACTGTT LITVPILMVEFYIILKAVTNVSSAVFWKLLIASTIMLVFGYMGESGIMNVMTAFVIGMAAWLYMIYEIFAGEAGQASANSGNGPAQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACAGTTCCAATCTTAATGGTTGAGTTCTATATCATACTTAAAGCT---------GTA---ACTAATGTTTCATCT---GCAGTG------------------------------------TTCTGGAAA---TTACTAATTGCATCTACAATAATGCTAGTATTTGGATACATGGGTGAG---------TCA------------------GGG------ATA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ATGACTGCA---TTTGTTATCGGAATGGCAGCTTGGTTATACATGATCTACGAAATC---------------TTT------GCA---GGTGAAGCAGGACAAGCAAGTGCTAAC------AGT---GGCAATGGCCCAGCA---CAA---ACT---GCT---TTT---AAT---GCGCTA---AGATTAATCGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPILMVEFYIILKA---V-TNVSS-AV------------FWK-LLIASTIMLVFGYMGE---S------G--I-----------M----------------------NV------MTA-FVIGMAAWLYMIYEI-----F--A-GEAGQASAN--S-GNGPA-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ929139 [IV-Alpha7-HOT2C01] PRGD_OTU079_65120454db28bcc515480c9c4999669d gb|KJ929139| PRGD_OTU079_65120454db28bcc515480c9c4999669d, putative proteorhodopsin gene, partial cds. PRGD_OTU079_65120454db28bcc515480c9c4999669d, putative proteorhodopsin gene, partial cds. KJ929139 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), English Channel (48.7717, -3.9683) CTAATTACAGTTCCAATCTTAATGGTTGAATTCTATATCATACTTAAAGCTGTAACTAATGTTTCATCTTCAGTATTCTGGAAATTACTAATTGCATCTACAATTATGCTAGTATTCGGATATATGGGTGAGTCAGGAATGATGAATGTAATGACAGCATTTGTTGTTGGTATGGCAGCTTGGTTATACATGATCTACGAAATCTTTGCAGGTGAAGCAGGACAAGCAAGTGCTAACAGTGGCAATGGCCCAGCACAAACTGCTTTTAATGCACTAAGATTAATCGTGACTGTT LITVPILMVEFYIILKAVTNVSSSVFWKLLIASTIMLVFGYMGESGMMNVMTAFVVGMAAWLYMIYEIFAGEAGQASANSGNGPAQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTTCCAATCTTAATGGTTGAATTCTATATCATACTTAAAGCT---------GTA---ACTAATGTTTCATCT---TCAGTA------------------------------------TTCTGGAAA---TTACTAATTGCATCTACAATTATGCTAGTATTCGGATATATGGGTGAG---------TCA------------------GGA------ATG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ATGACAGCA---TTTGTTGTTGGTATGGCAGCTTGGTTATACATGATCTACGAAATC---------------TTT------GCA---GGTGAAGCAGGACAAGCAAGTGCTAAC------AGT---GGCAATGGCCCAGCA---CAA---ACT---GCT---TTT---AAT---GCACTA---AGATTAATCGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPILMVEFYIILKA---V-TNVSS-SV------------FWK-LLIASTIMLVFGYMGE---S------G--M-----------M----------------------NV------MTA-FVVGMAAWLYMIYEI-----F--A-GEAGQASAN--S-GNGPA-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ929140 [IV-Alpha7-HOT2C01] PRGD_OTU079_99adf0d948e9bf86e53ca11474db0708 gb|KJ929140| PRGD_OTU079_99adf0d948e9bf86e53ca11474db0708, putative proteorhodopsin gene, partial cds. PRGD_OTU079_99adf0d948e9bf86e53ca11474db0708, putative proteorhodopsin gene, partial cds. KJ929140 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACCGTTCCAATCTTAATGGTTGAGTTCTATATTATACTTAAAGCTGTTACTAACGTTTCATCTTCAGTTTTCTGGAAATTACTAATTGCATCTACAATAATGCTAGTATTCGGATATATGGGTGAAGCAGGAATGATGAATGTAATGACTGCATTTGTTATTGGAATGGCAGCTTGGTTATATATGATCTACGAAATCTTTGCAGGTGAAGCAGGACAAGCAAGTGCTAACAGTGGCAATGGCCCAGCACAAACTGCTTTTAATGCGCTTAGATTAATCGTGACTGTT LITVPILMVEFYIILKAVTNVSSSVFWKLLIASTIMLVFGYMGEAGMMNVMTAFVIGMAAWLYMIYEIFAGEAGQASANSGNGPAQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACCGTTCCAATCTTAATGGTTGAGTTCTATATTATACTTAAAGCT---------GTT---ACTAACGTTTCATCT---TCAGTT------------------------------------TTCTGGAAA---TTACTAATTGCATCTACAATAATGCTAGTATTCGGATATATGGGTGAA---------GCA------------------GGA------ATG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ATGACTGCA---TTTGTTATTGGAATGGCAGCTTGGTTATATATGATCTACGAAATC---------------TTT------GCA---GGTGAAGCAGGACAAGCAAGTGCTAAC------AGT---GGCAATGGCCCAGCA---CAA---ACT---GCT---TTT---AAT---GCGCTT---AGATTAATCGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPILMVEFYIILKA---V-TNVSS-SV------------FWK-LLIASTIMLVFGYMGE---A------G--M-----------M----------------------NV------MTA-FVIGMAAWLYMIYEI-----F--A-GEAGQASAN--S-GNGPA-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ929142 [IV-Alpha7-HOT2C01] PRGD_OTU079_fc3fc38707fa10ee1413754165c50efa gb|KJ929142| PRGD_OTU079_fc3fc38707fa10ee1413754165c50efa, putative proteorhodopsin gene, partial cds. PRGD_OTU079_fc3fc38707fa10ee1413754165c50efa, putative proteorhodopsin gene, partial cds. KJ929142 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683) TTAATTACGGTTCCAATCTTAATGGTTGAGTTCTATATTATACTTAAAGCTGTTACTAATGTTTCATCTTCAGTTTTCTGGAAATTACTAATTGCATCTACAATAATGCTAGTATTCGGATATATGGGTGAAGCTGGAATGATGAATGTAATGACTGCATTTGTTATTGGAATGGCAGCTTGGTTATACATGATCTACGAAATCTTTGCAGGTGAAGCAGGACAAGCAAGTGCTAACAGTGGCAATGGCCCAGCACAAACTGCCTTTAACGCGCTTAGATTAATCGTGACTGTT LITVPILMVEFYIILKAVTNVSSSVFWKLLIASTIMLVFGYMGEAGMMNVMTAFVIGMAAWLYMIYEIFAGEAGQASANSGNGPAQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACGGTTCCAATCTTAATGGTTGAGTTCTATATTATACTTAAAGCT---------GTT---ACTAATGTTTCATCT---TCAGTT------------------------------------TTCTGGAAA---TTACTAATTGCATCTACAATAATGCTAGTATTCGGATATATGGGTGAA---------GCT------------------GGA------ATG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ATGACTGCA---TTTGTTATTGGAATGGCAGCTTGGTTATACATGATCTACGAAATC---------------TTT------GCA---GGTGAAGCAGGACAAGCAAGTGCTAAC------AGT---GGCAATGGCCCAGCA---CAA---ACT---GCC---TTT---AAC---GCGCTT---AGATTAATCGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPILMVEFYIILKA---V-TNVSS-SV------------FWK-LLIASTIMLVFGYMGE---A------G--M-----------M----------------------NV------MTA-FVIGMAAWLYMIYEI-----F--A-GEAGQASAN--S-GNGPA-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ929141 [IV-Alpha7-HOT2C01] PRGD_OTU079_b8ff7db17cead16132c7010a81a07d75 gb|KJ929141| PRGD_OTU079_b8ff7db17cead16132c7010a81a07d75, putative proteorhodopsin gene, partial cds. PRGD_OTU079_b8ff7db17cead16132c7010a81a07d75, putative proteorhodopsin gene, partial cds. KJ929141 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185) TTAATTACCGTGCCAATCTTAATGGTTGAGTTTTATATAATTCTTAAAGCTGTAAGCAATGTTGCTTCTTCAGTATTTTGGAAATTACTAATTGCATCTCTTGTAATGTTAGTTTTCGGTTACTTAGGTGAAGCTGGAATGATGAATGTAATGACAGCCTTTGTTATTTCAATGGCGGCTTGGTTATACATCATCTATGAAATCTTTGCTGGTGAAGCAGGACAAGCAAGTGCGAGTAGTGGCAATGGCCCAGCGCAAACTGCTTTTAATGCATTAAGACTGATTGTAACTATT LITVPILMVEFYIILKAVSNVASSVFWKLLIASLVMLVFGYLGEAGMMNVMTAFVISMAAWLYIIYEIFAGEAGQASASSGNGPAQTAFNALRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACCGTGCCAATCTTAATGGTTGAGTTTTATATAATTCTTAAAGCT---------GTA---AGCAATGTTGCTTCT---TCAGTA------------------------------------TTTTGGAAA---TTACTAATTGCATCTCTTGTAATGTTAGTTTTCGGTTACTTAGGTGAA---------GCT------------------GGA------ATG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ATGACAGCC---TTTGTTATTTCAATGGCGGCTTGGTTATACATCATCTATGAAATC---------------TTT------GCT---GGTGAAGCAGGACAAGCAAGTGCGAGT------AGT---GGCAATGGCCCAGCG---CAA---ACT---GCT---TTT---AAT---GCATTA---AGACTGATTGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPILMVEFYIILKA---V-SNVAS-SV------------FWK-LLIASLVMLVFGYLGE---A------G--M-----------M----------------------NV------MTA-FVISMAAWLYIIYEI-----F--A-GEAGQASAS--S-GNGPA-Q-T-A-F-N-AL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926776 [IV-Alpha7-HOT2C01] PRGD_OTU003_0d5901f10a8fd2c1002b05f974fa9d1e gb|KJ926776| PRGD_OTU003_0d5901f10a8fd2c1002b05f974fa9d1e, putative proteorhodopsin gene, partial cds. PRGD_OTU003_0d5901f10a8fd2c1002b05f974fa9d1e, putative proteorhodopsin gene, partial cds. KJ926776 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-23.5956, 69.0419) TTGATTACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCTGCAATTACTGCAGTTGCGTCAGGTTTATTCTGGAGACTACTAATTGCATCGATTGTAATGTTAGTTGGTGGTTATCTTGGTGAAGTTGGAGCAATGAATGTTGGCCTAGCCTTCGTTATTGGTATGGCTGGATGGATATACATCATCTACGAGGTTTTTGCAGGGGAAGCTAGTAAGGCGAGTGCTGGTAGTGGAAACGCTGCTGGGCAAACTGCGTTTAATGCATTGAGATTAATCGTTACAGTT LITVPLQIVEFYVILAAITAVASGLFWRLLIASIVMLVGGYLGEVGAMNVGLAFVIGMAGWIYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCTCTACAAATTGTAGAGTTCTATGTAATTCTTGCTGCA---------ATT---ACTGCAGTTGCGTCA---GGTTTA------------------------------------TTCTGGAGA---CTACTAATTGCATCGATTGTAATGTTAGTTGGTGGTTATCTTGGTGAA---------GTT------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------AATGTT------------------GGCCTAGCC---TTCGTTATTGGTATGGCTGGATGGATATACATCATCTACGAGGTT---------------TTT------GCA---GGGGAAGCTAGTAAGGCGAGTGCTGGT------AGT---GGAAACGCTGCTGGG---CAA---ACT---GCG---TTT---AAT---GCATTG---AGATTAATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---I-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------GLA-FVIGMAGWIYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926772 [IV-Alpha7-HOT2C01] PRGD_OTU003_030c8b11cd6f80ff6a3a6ae189eb3b75 gb|KJ926772| PRGD_OTU003_030c8b11cd6f80ff6a3a6ae189eb3b75, putative proteorhodopsin gene, partial cds. PRGD_OTU003_030c8b11cd6f80ff6a3a6ae189eb3b75, putative proteorhodopsin gene, partial cds. KJ926772 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-14.48, 113.45) TTGATCACGGTGCCATTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCAATGACTGCTGTTGCTTCGGGTTTATTCTGGAGACTATTAATCGCATCAATTGTGATGTTGGTTGGTGGCTATTTAGGTGAAGTTGGAGCAATGAATGTAACGCTAGCCTTCGTTATAGGAATGGCTGGATGGCTATACATCATCTACGAAATTTTTGCAGGTGAAGCAAGTAAGGCAAGTGCAGGTAGTGGAAACGCTGCTGGTCAAACTGCATTCAATGCATTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACGGTGCCATTACAAATTGTAGAGTTCTATGTAATTCTTGCGGCA---------ATG---ACTGCTGTTGCTTCG---GGTTTA------------------------------------TTCTGGAGA---CTATTAATCGCATCAATTGTGATGTTGGTTGGTGGCTATTTAGGTGAA---------GTT------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTTATAGGAATGGCTGGATGGCTATACATCATCTACGAAATT---------------TTT------GCA---GGTGAAGCAAGTAAGGCAAGTGCAGGT------AGT---GGAAACGCTGCTGGT---CAA---ACT---GCA---TTC---AAT---GCATTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926773 [IV-Alpha7-HOT2C01] PRGD_OTU003_0bb788dd61a629fc2ecbe58d5d93cffc gb|KJ926773| PRGD_OTU003_0bb788dd61a629fc2ecbe58d5d93cffc, putative proteorhodopsin gene, partial cds. PRGD_OTU003_0bb788dd61a629fc2ecbe58d5d93cffc, putative proteorhodopsin gene, partial cds. KJ926773 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTGATCACGGTGCCATTACAAATTGTAGAGTTCTATGTAATTCTTGCAGCAATGACTGCTGTTGCTTCGGGTTTATTCTGGAGACTACTAATCGCATCAATTGTGATGTTGGTTGGTGGCTATTTAGGTGAAGTTGGAGCAATGAATGTAACGCTAGCCTTCGTTATAGGAATGGCTGGATGGCTATACATCATCTACGAAATTTTTGCAGGTGAAGCAAGTAAGGCAAGTGCAGGTAGTGGAAACGCTGCTGGTCAAACTGCATTCAATGCATTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIVMLVGGYLGEVGAMNVTLAFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACGGTGCCATTACAAATTGTAGAGTTCTATGTAATTCTTGCAGCA---------ATG---ACTGCTGTTGCTTCG---GGTTTA------------------------------------TTCTGGAGA---CTACTAATCGCATCAATTGTGATGTTGGTTGGTGGCTATTTAGGTGAA---------GTT------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTTATAGGAATGGCTGGATGGCTATACATCATCTACGAAATT---------------TTT------GCA---GGTGAAGCAAGTAAGGCAAGTGCAGGT------AGT---GGAAACGCTGCTGGT---CAA---ACT---GCA---TTC---AAT---GCATTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIVMLVGGYLGE---V------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926799 [IV-Alpha7-HOT2C01] PRGD_OTU003_345f10de0823e79bdf17f6d0666349ea gb|KJ926799| PRGD_OTU003_345f10de0823e79bdf17f6d0666349ea, putative proteorhodopsin gene, partial cds. PRGD_OTU003_345f10de0823e79bdf17f6d0666349ea, putative proteorhodopsin gene, partial cds. KJ926799 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), English Channel (48.7717, -3.9683) CTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCAATGACAGCTGTTGCTTCTGGGTTATTCTGGAGACTATTAATAGCTTCTATTATAATGCTAGTTGGCGGATATCTAGGTGAAGTTGGAGCGATGCATGTTGGTCTAGCCTTCGTAATAGGAATGGCTGGATGGTTGTATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTGATTGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIIMLVGGYLGEVGAMHVGLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCA---------ATG---ACAGCTGTTGCTTCT---GGGTTA------------------------------------TTCTGGAGA---CTATTAATAGCTTCTATTATAATGCTAGTTGGCGGATATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------CATGTT------------------GGTCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTGTATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIIMLVGGYLGE---V------G--A-----------M----------------------HV------GLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926812 [IV-Alpha7-HOT2C01] PRGD_OTU003_4f2d7587b878de500f2058c0bba5e01b gb|KJ926812| PRGD_OTU003_4f2d7587b878de500f2058c0bba5e01b, putative proteorhodopsin gene, partial cds. PRGD_OTU003_4f2d7587b878de500f2058c0bba5e01b, putative proteorhodopsin gene, partial cds. KJ926812 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), English Channel (48.7717, -3.9683) CTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCTGCAATGACAGCTGTTGCTTCTGGGTTATTCTGGAGACTATTAATAGCTTCTATTATAATGCTAGTTGGCGGTTATCTAGGTGAAGTTGGAGCGATGCATGTTGGTCTAGCCTTCGTAATAGGAATGGCTGGATGGTTGTATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTGATTGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIIMLVGGYLGEVGAMHVGLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCTGCA---------ATG---ACAGCTGTTGCTTCT---GGGTTA------------------------------------TTCTGGAGA---CTATTAATAGCTTCTATTATAATGCTAGTTGGCGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------CATGTT------------------GGTCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTGTATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIIMLVGGYLGE---V------G--A-----------M----------------------HV------GLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926790 [IV-Alpha7-HOT2C01] PRGD_OTU003_23e46b3cd402542cad18cda2d2cb1e95 gb|KJ926790| PRGD_OTU003_23e46b3cd402542cad18cda2d2cb1e95, putative proteorhodopsin gene, partial cds. PRGD_OTU003_23e46b3cd402542cad18cda2d2cb1e95, putative proteorhodopsin gene, partial cds. KJ926790 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCAATGACAGCTGTTGCTTCTGGGTTATTCTGGAGACTATTAATAGCTTCTATTATAATGCTAGTTGGTGGTTATCTAGGTGAAGTTGGAGCGATGAATGTTGGTCTAGCCTTCGTAATAGGAATGGCTGGATGGTTGTATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTGATTGTTACAGTA LITVPLQIVEFYVILAAMTAVASGLFWRLLIASIIMLVGGYLGEVGAMNVGLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCA---------ATG---ACAGCTGTTGCTTCT---GGGTTA------------------------------------TTCTGGAGA---CTATTAATAGCTTCTATTATAATGCTAGTTGGTGGTTATCTAGGTGAA---------GTT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTT------------------GGTCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTGTATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-GL------------FWR-LLIASIIMLVGGYLGE---V------G--A-----------M----------------------NV------GLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926775 [IV-Alpha7-HOT2C01] PRGD_OTU003_0d1d72f5425ee44d78ee47cf1a528c4d gb|KJ926775| PRGD_OTU003_0d1d72f5425ee44d78ee47cf1a528c4d, putative proteorhodopsin gene, partial cds. PRGD_OTU003_0d1d72f5425ee44d78ee47cf1a528c4d, putative proteorhodopsin gene, partial cds. KJ926775 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73) TTGATTACTGTGCCTCTACAAATCGTAGAATTTTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGATTATTGATTGCATCAATTATCATGCTTGTCTTCGGATATATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAGTTTTCGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTGATTGTTACAGTA LITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTTTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---TTATTGATTGCATCAATTATCATGCTTGTCTTCGGATATATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTATGAAGTT---------------TTC------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926867 [IV-Alpha7-HOT2C01] PRGD_OTU003_af2945ff50c8b0caa3fa1402286b3ac7 gb|KJ926867| PRGD_OTU003_af2945ff50c8b0caa3fa1402286b3ac7, putative proteorhodopsin gene, partial cds. PRGD_OTU003_af2945ff50c8b0caa3fa1402286b3ac7, putative proteorhodopsin gene, partial cds. KJ926867 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCAATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTGACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTGATTGTTACAGTA LITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCA---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTG------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926786 [IV-Alpha7-HOT2C01] PRGD_OTU003_209cccd52d72f5d365a269a39db83848 gb|KJ926786| PRGD_OTU003_209cccd52d72f5d365a269a39db83848, putative proteorhodopsin gene, partial cds. PRGD_OTU003_209cccd52d72f5d365a269a39db83848, putative proteorhodopsin gene, partial cds. KJ926786 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGCATGAAGGTCTAGCCTTTGCAATAGGCATGGCTGGATGGTTATACATCATCTACGAAGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTA LITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMHEGLAFAIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATAATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------CATGAA------------------GGTCTAGCC---TTTGCAATAGGCATGGCTGGATGGTTATACATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------HE------GLA-FAIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926846 [IV-Alpha7-HOT2C01] PRGD_OTU003_9232c45617e47d6ca8742230126c05f9 gb|KJ926846| PRGD_OTU003_9232c45617e47d6ca8742230126c05f9, putative proteorhodopsin gene, partial cds. PRGD_OTU003_9232c45617e47d6ca8742230126c05f9, putative proteorhodopsin gene, partial cds. KJ926846 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATTACTGTGCCTCTGCAAATTGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTGTTAATTGCATCAATTATTATGCTTGTCTTCGGTTATATGGGTGAAACTGGAGCGATGAATGTAACGCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTAGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTGATTGTTACAGTA LITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASASSGNAAGQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCTCTGCAAATTGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTGTTAATTGCATCAATTATTATGCTTGTCTTCGGTTATATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTAGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAS--S-GNAAG-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926797 [IV-Alpha7-HOT2C01] PRGD_OTU003_32cafe64d6d3ad05b68068eff42e9cc0 gb|KJ926797| PRGD_OTU003_32cafe64d6d3ad05b68068eff42e9cc0, putative proteorhodopsin gene, partial cds. PRGD_OTU003_32cafe64d6d3ad05b68068eff42e9cc0, putative proteorhodopsin gene, partial cds. KJ926797 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATTACTGTGCCTCTACAAATAGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATCATGCTTGTCTTCGGTTACATGGGCGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTC LITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCTCTACAAATAGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATCATGCTTGTCTTCGGTTACATGGGCGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTATGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926873 [IV-Alpha7-HOT2C01] PRGD_OTU003_b7309735d371694bd0550b24eff3e0b1 gb|KJ926873| PRGD_OTU003_b7309735d371694bd0550b24eff3e0b1, putative proteorhodopsin gene, partial cds. PRGD_OTU003_b7309735d371694bd0550b24eff3e0b1, putative proteorhodopsin gene, partial cds. KJ926873 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) TTGATTACTGTGCCTCTACAAATCGTAGAATTTTATGTAATTCTTGCTGCAATGACAGCAGTATCATCAAGCTTATTCTGGAGACTTCTCATCGCTTCTATCGTGATGCTTGTTTTTGGTTATATGGGTGAAACTGCAGATGCTGGTTCATCTATGGTAATGCTAGGTTTTGTCATTGGAATGGCAGCTTGGATTTACATAATTTACGAGGTATTTGCTGGTGAAGCAAGTAAAGCAAGTGCCGGCAGTGGAAATGCTGCAGGTCAAGCTGCATTTAACGCGTTGAGATTGATCGTTACAGTT LITVPLQIVEFYVILAAMTAVSSSLFWRLLIASIVMLVFGYMGETADAGSSMVMLGFVIGMAAWIYIIYEVFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTTTATGTAATTCTTGCTGCA---------ATG---ACAGCAGTATCATCA---AGCTTA------------------------------------TTCTGGAGA---CTTCTCATCGCTTCTATCGTGATGCTTGTTTTTGGTTATATGGGTGAAACTGCAGATGCT------------------GGT------TCA---------------------------------TCT------------------------------------------------------------------ATGGTA------------------ATGCTAGGT---TTTGTCATTGGAATGGCAGCTTGGATTTACATAATTTACGAGGTA---------------TTT------GCT---GGTGAAGCAAGTAAAGCAAGTGCCGGC------AGT---GGAAATGCTGCAGGT---CAA---GCT---GCA---TTT---AAC---GCGTTG---AGATTGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVSS-SL------------FWR-LLIASIVMLVFGYMGETADA------G--S-----------S----------------------MV------MLG-FVIGMAAWIYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926874 [IV-Alpha7-HOT2C01] PRGD_OTU003_b8a10fdba59f3db77c4d80a987e652e7 gb|KJ926874| PRGD_OTU003_b8a10fdba59f3db77c4d80a987e652e7, putative proteorhodopsin gene, partial cds. PRGD_OTU003_b8a10fdba59f3db77c4d80a987e652e7, putative proteorhodopsin gene, partial cds. KJ926874 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTGATTACTGTGCCTCTACAAATCGTAGAATTTTATGTAATTCTTGCTGCAATGACTGCAGTTTCATCAAGCCTATTCTGGAGACTACTTATCGCGTCAATCGTGATGCTTGTTTTCGGTTACATGGGTGAAACAGGCGCAATGAGCGCAATGCTAGGCTTTGTCATTGGAATGGCAGCTTGGATTTACATAATTTACGAGGTATTTGCAGGTGAAGCAAGTAAAGCAAGTGCTGGCAGTGGAAATGCTGCTGGACAGGCTGCATTTAACGCATTGAGATTGATCGTTACAGTT LITVPLQIVEFYVILAAMTAVSSSLFWRLLIASIVMLVFGYMGETGAMSAMLGFVIGMAAWIYIIYEVFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTTTATGTAATTCTTGCTGCA---------ATG---ACTGCAGTTTCATCA---AGCCTA------------------------------------TTCTGGAGA---CTACTTATCGCGTCAATCGTGATGCTTGTTTTCGGTTACATGGGTGAA---------ACA------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------AGCGCA------------------ATGCTAGGC---TTTGTCATTGGAATGGCAGCTTGGATTTACATAATTTACGAGGTA---------------TTT------GCA---GGTGAAGCAAGTAAAGCAAGTGCTGGC------AGT---GGAAATGCTGCTGGA---CAG---GCT---GCA---TTT---AAC---GCATTG---AGATTGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVSS-SL------------FWR-LLIASIVMLVFGYMGE---T------G--A-----------M----------------------SA------MLG-FVIGMAAWIYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926858 [IV-Alpha7-HOT2C01] PRGD_OTU003_a6d7aac5398284b5685b0498744f6e13 gb|KJ926858| PRGD_OTU003_a6d7aac5398284b5685b0498744f6e13, putative proteorhodopsin gene, partial cds. PRGD_OTU003_a6d7aac5398284b5685b0498744f6e13, putative proteorhodopsin gene, partial cds. KJ926858 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTTGTCTTCGGATATATTGGTGAAACTGCGCCTACTGGTTCATCTATGGTTATCTGGGGCTTTGTCATCGGAATGGCTGGATGGTTATACATCATCTATGAAATTTTTGCAGGAGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAGCTGCGTTCAACGCGTTGAGATTGATCGTTACAGTA LITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYIGETAPTGSSMVIWGFVIGMAGWLYIIYEIFAGEASKASAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTTGTCTTCGGATATATTGGTGAAACTGCGCCTACT------------------GGT------TCA---------------------------------TCT------------------------------------------------------------------ATGGTT------------------ATCTGGGGC---TTTGTCATCGGAATGGCTGGATGGTTATACATCATCTATGAAATT---------------TTT------GCA---GGAGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---GCT---GCG---TTC---AAC---GCGTTG---AGATTGATCGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYIGETAPT------G--S-----------S----------------------MV------IWG-FVIGMAGWLYIIYEI-----F--A-GEASKASAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926792 [IV-Alpha7-HOT2C01] PRGD_OTU003_2a91e7698e5bbe4b6b9b6700aa80a51a gb|KJ926792| PRGD_OTU003_2a91e7698e5bbe4b6b9b6700aa80a51a, putative proteorhodopsin gene, partial cds. PRGD_OTU003_2a91e7698e5bbe4b6b9b6700aa80a51a, putative proteorhodopsin gene, partial cds. KJ926792 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) TTGATTACTGTGCCTCTACAAATCGTAGAATTTTACGTAATTCTTGCGGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGCTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAAACTGCATTTAACGCATTGAGATTAATTGTTACAGTC LITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTTTACGTAATTCTTGCGGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGCTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAA---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926862 [IV-Alpha7-HOT2C01] PRGD_OTU003_ab3cb291c44830ef9540cc1985eb01a6 gb|KJ926862| PRGD_OTU003_ab3cb291c44830ef9540cc1985eb01a6, putative proteorhodopsin gene, partial cds. PRGD_OTU003_ab3cb291c44830ef9540cc1985eb01a6, putative proteorhodopsin gene, partial cds. KJ926862 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTC LITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926804 [IV-Alpha7-HOT2C01] PRGD_OTU003_3ead314d9f0415f398b2706c651d244d gb|KJ926804| PRGD_OTU003_3ead314d9f0415f398b2706c651d244d, putative proteorhodopsin gene, partial cds. PRGD_OTU003_3ead314d9f0415f398b2706c651d244d, putative proteorhodopsin gene, partial cds. KJ926804 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-35.05, 23.73) TTGATTACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTACTAATTGCATCAATTATTATGCTTGTCGGTGGTTATCTCGGTGAAACTGGAGCGATGAATGTAACACTAGCCTTTGTAATTGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCGAGCAAGGCAAGTGCTGGTAGTGGGAATGCTGCCGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTA LITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVGGYLGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTACTAATTGCATCAATTATTATGCTTGTCGGTGGTTATCTCGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTAGCC---TTTGTAATTGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCGAGCAAGGCAAGTGCTGGT------AGT---GGGAATGCTGCCGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVGGYLGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926801 [IV-Alpha7-HOT2C01] PRGD_OTU003_395aedcaa822bd7be7b044a43dccae27 gb|KJ926801| PRGD_OTU003_395aedcaa822bd7be7b044a43dccae27, putative proteorhodopsin gene, partial cds. PRGD_OTU003_395aedcaa822bd7be7b044a43dccae27, putative proteorhodopsin gene, partial cds. KJ926801 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTAATTACGGTACCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTACTAATTGCTTCAATTATTATGCTAGTTGGTGGTTATCTTGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTTGTAATTGGTATGGCTGGATGGTTATACATCATCTACGAAGTTTTTGCAGGTGAAGCGAGCAAGGCAAGTGCTGGTAGTGGAAATGCTGCCGGTCAAACTGCATTTAATGCATTAAGATTAATTGTTACAGTA LITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVGGYLGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACGGTACCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTACTAATTGCTTCAATTATTATGCTAGTTGGTGGTTATCTTGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTTGTAATTGGTATGGCTGGATGGTTATACATCATCTACGAAGTT---------------TTT------GCA---GGTGAAGCGAGCAAGGCAAGTGCTGGT------AGT---GGAAATGCTGCCGGT---CAA---ACT---GCA---TTT---AAT---GCATTA---AGATTAATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVGGYLGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926831 [IV-Alpha7-HOT2C01] PRGD_OTU003_7752c9d253fc74e28379f375cc8a84bd gb|KJ926831| PRGD_OTU003_7752c9d253fc74e28379f375cc8a84bd, putative proteorhodopsin gene, partial cds. PRGD_OTU003_7752c9d253fc74e28379f375cc8a84bd, putative proteorhodopsin gene, partial cds. KJ926831 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) TTAATTACGGTACCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTACTAATTGCTTCAATTATTATGCTAGTTGGTGGTTATCTCGGTGAAACTGGAGCGATGAATGTAACGCTAGCCTTTGTAATTGGTATGGCTGGATGGTTATACATCATCTACGAGGTTTTTGCAGGTGAAGCGAGCAAGGCAAGTGCTGGTAGTGGAAATGCTGCCGGTCAAACTGCATTTAACGCATTAAGATTAATTGTTACAGTA LITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVGGYLGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACGGTACCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTACTAATTGCTTCAATTATTATGCTAGTTGGTGGTTATCTCGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTAGCC---TTTGTAATTGGTATGGCTGGATGGTTATACATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCGAGCAAGGCAAGTGCTGGT------AGT---GGAAATGCTGCCGGT---CAA---ACT---GCA---TTT---AAC---GCATTA---AGATTAATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVGGYLGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926900 [IV-Alpha7-HOT2C01] PRGD_OTU003_da7e253d9430b39fa6eb3d19c3601a00 gb|KJ926900| PRGD_OTU003_da7e253d9430b39fa6eb3d19c3601a00, putative proteorhodopsin gene, partial cds. PRGD_OTU003_da7e253d9430b39fa6eb3d19c3601a00, putative proteorhodopsin gene, partial cds. KJ926900 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTGATTACTGTGCCTCTACAAATTGTGGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTATTCTGGAGACTATTAATTGCATCAATTATTATGCTAGTTGGTGGTTATCTTGGAGAAACTGGAGCGATGAATGTAACTCTAGCCTTTGTAATTGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAGGCGAGCAAGGCAAGTGCTGGTAGTGGTAATGCTGCTGGTCAGACTGCGTTTAATGCATTGAGATTAATTGTTACAGTA LITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVGGYLGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCTCTACAAATTGTGGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTA------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTAGTTGGTGGTTATCTTGGAGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTTGTAATTGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAGGCGAGCAAGGCAAGTGCTGGT------AGT---GGTAATGCTGCTGGT---CAG---ACT---GCG---TTT---AAT---GCATTG---AGATTAATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVGGYLGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926828 [IV-Alpha7-HOT2C01] PRGD_OTU003_6f939b6b19ec116fd3776b55bf48da1f gb|KJ926828| PRGD_OTU003_6f939b6b19ec116fd3776b55bf48da1f, putative proteorhodopsin gene, partial cds. PRGD_OTU003_6f939b6b19ec116fd3776b55bf48da1f, putative proteorhodopsin gene, partial cds. KJ926828 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTACTAATTGCATCAATTATTATGCTTGTCTTCGGTTATCTAGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTTGTAATTGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCGAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCCGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTC LITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYLGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTACTAATTGCATCAATTATTATGCTTGTCTTCGGTTATCTAGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTTGTAATTGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCGAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCCGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYLGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926886 [IV-Alpha7-HOT2C01] PRGD_OTU003_c9303b4ba67b08c199001f5df1e91a15 gb|KJ926886| PRGD_OTU003_c9303b4ba67b08c199001f5df1e91a15, putative proteorhodopsin gene, partial cds. PRGD_OTU003_c9303b4ba67b08c199001f5df1e91a15, putative proteorhodopsin gene, partial cds. KJ926886 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTACTAATTGCATCAATTATTATGCTTGTCTTCGGTTATCTCGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTTGTAATTGGTATGGCTGGATGGTTATATATCATCTACGAGGTGTTTGCAGGTGAAGCGAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTC LITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYLGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCTCTACAAATCGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTACTAATTGCATCAATTATTATGCTTGTCTTCGGTTATCTCGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTTGTAATTGGTATGGCTGGATGGTTATATATCATCTACGAGGTG---------------TTT------GCA---GGTGAAGCGAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYLGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926807 [IV-Alpha7-HOT2C01] PRGD_OTU003_43ed236c13974f8fe5acf9a951bbbec7 gb|KJ926807| PRGD_OTU003_43ed236c13974f8fe5acf9a951bbbec7, putative proteorhodopsin gene, partial cds. PRGD_OTU003_43ed236c13974f8fe5acf9a951bbbec7, putative proteorhodopsin gene, partial cds. KJ926807 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATTACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCGATGACAGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTACATGGGTGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAACGCTGCTGGTCAGACTGCATTTAACGCATTGAGATTAATTGTTACAGTA LITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVFGYMGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACAGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTTGTCTTCGGTTACATGGGTGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGTATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAACGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGATTAATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVFGYMGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926890 [IV-Alpha7-HOT2C01] PRGD_OTU003_d0887897bd714979b748236d7d1efd8f gb|KJ926890| PRGD_OTU003_d0887897bd714979b748236d7d1efd8f, putative proteorhodopsin gene, partial cds. PRGD_OTU003_d0887897bd714979b748236d7d1efd8f, putative proteorhodopsin gene, partial cds. KJ926890 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) TTAATTACCGTACCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCGATGACTGCTGTTGCTTCAAGCCTTTTCTGGAGACTATTAATTGCATCAATTATTATGCTAGTTGGTGGTTATCTCGGCGAAACTGGAGCGATGAATGTAACTCTAGCCTTCGTAATAGGAATGGCTGGATGGTTATATATCATCTACGAGGTTTTTGCAGGTGAAGCAAGCAAGGCAAGTGCTGGTAGTGGAAATGCTGCTGGTCAGACTGCATTTAACGCATTGAGACTAATTGTTACAGTC LITVPLQIVEFYVILAAMTAVASSLFWRLLIASIIMLVGGYLGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKASAGSGNAAGQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACCGTACCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCG---------ATG---ACTGCTGTTGCTTCA---AGCCTT------------------------------------TTCTGGAGA---CTATTAATTGCATCAATTATTATGCTAGTTGGTGGTTATCTCGGCGAA---------ACT------------------GGA------GCG---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGCC---TTCGTAATAGGAATGGCTGGATGGTTATATATCATCTACGAGGTT---------------TTT------GCA---GGTGAAGCAAGCAAGGCAAGTGCTGGT------AGT---GGAAATGCTGCTGGT---CAG---ACT---GCA---TTT---AAC---GCATTG---AGACTAATTGTTACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---M-TAVAS-SL------------FWR-LLIASIIMLVGGYLGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKASAG--S-GNAAG-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926842 [IV-Alpha7-HOT2C01] PRGD_OTU003_896e91bead662e11cc4d2a13010b9572 gb|KJ926842| PRGD_OTU003_896e91bead662e11cc4d2a13010b9572, putative proteorhodopsin gene, partial cds. PRGD_OTU003_896e91bead662e11cc4d2a13010b9572, putative proteorhodopsin gene, partial cds. KJ926842 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTGATAACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCGATAACTTCTGTTGCAGCAAGCCTTTTCTGGAGACTATTGATTGCATCAATTATCATGCTTGTCGGTGGTTACCTGGGTGAAACTGGAGCAATGAATGTTACTTTAGCCTTCGTTATTGGTATGGCTGGATGGTTATACATTATTTATGAAGTTTTTGCTGGTGAAGCAAGTAAGGTAAGTGCTGGTAGTGGAAACGCTGCTGGACAAGCTGCATTTAATGCATTGAGACTGATCGTTACAGTT LITVPLQIVEFYVILAAITSVAASLFWRLLIASIIMLVGGYLGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKVSAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCG---------ATA---ACTTCTGTTGCAGCA---AGCCTT------------------------------------TTCTGGAGA---CTATTGATTGCATCAATTATCATGCTTGTCGGTGGTTACCTGGGTGAA---------ACT------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------AATGTT------------------ACTTTAGCC---TTCGTTATTGGTATGGCTGGATGGTTATACATTATTTATGAAGTT---------------TTT------GCT---GGTGAAGCAAGTAAGGTAAGTGCTGGT------AGT---GGAAACGCTGCTGGA---CAA---GCT---GCA---TTT---AAT---GCATTG---AGACTGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---I-TSVAA-SL------------FWR-LLIASIIMLVGGYLGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKVSAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926902 [IV-Alpha7-HOT2C01] PRGD_OTU003_ded9aabc56db81aa1f3a73eab507a18a gb|KJ926902| PRGD_OTU003_ded9aabc56db81aa1f3a73eab507a18a, putative proteorhodopsin gene, partial cds. PRGD_OTU003_ded9aabc56db81aa1f3a73eab507a18a, putative proteorhodopsin gene, partial cds. KJ926902 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATAACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCGATAACTTCTGTTGCAGCAAGCCTTTTCTGGAGACTATTGATTGCATCAATTATCATGCTTGTCGGTGGTTACCTGGGTGAAACTGGAGCAATGAATGTTACTTTGGCCTTCGTTATTGGTATGGCTGGATGGTTATACATCATTTATGAAGTTTTTGCTGGTGAAGCAAGTAAGGTAAGTGCTGGTAGTGGAAACGCTGCTGGACAAGCTGCATTTAATGCATTGAGACTGATCGTTACAGTT LITVPLQIVEFYVILAAITSVAASLFWRLLIASIIMLVGGYLGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKVSAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCG---------ATA---ACTTCTGTTGCAGCA---AGCCTT------------------------------------TTCTGGAGA---CTATTGATTGCATCAATTATCATGCTTGTCGGTGGTTACCTGGGTGAA---------ACT------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------AATGTT------------------ACTTTGGCC---TTCGTTATTGGTATGGCTGGATGGTTATACATCATTTATGAAGTT---------------TTT------GCT---GGTGAAGCAAGTAAGGTAAGTGCTGGT------AGT---GGAAACGCTGCTGGA---CAA---GCT---GCA---TTT---AAT---GCATTG---AGACTGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---I-TSVAA-SL------------FWR-LLIASIIMLVGGYLGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKVSAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926854 [IV-Alpha7-HOT2C01] PRGD_OTU003_a07cdeeccdbe3cc5d70a7e26dedb5f4f gb|KJ926854| PRGD_OTU003_a07cdeeccdbe3cc5d70a7e26dedb5f4f, putative proteorhodopsin gene, partial cds. PRGD_OTU003_a07cdeeccdbe3cc5d70a7e26dedb5f4f, putative proteorhodopsin gene, partial cds. KJ926854 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTGATAACTGTACCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCGATAACTTCTGTTGCAGCAAGCCTTTTCTGGAGACTATTGATTGCATCAATTATCATGCTTGTCGGTGGTTACCTAGGTGAAACTGGAGCAATGAATGTTACTTTGGCCTTCGTTATTGGTATGGCTGGATGGTTATACATCATTTATGAGGTTTTTGCTGGTGAAGCAAGTAAGGTAAGTGCTGGTAGTGGAAACGCTGCTGGACAAGCCGCATTTAATGCATTGAGACTGATCGTTACAGTT LITVPLQIVEFYVILAAITSVAASLFWRLLIASIIMLVGGYLGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKVSAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACTGTACCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCG---------ATA---ACTTCTGTTGCAGCA---AGCCTT------------------------------------TTCTGGAGA---CTATTGATTGCATCAATTATCATGCTTGTCGGTGGTTACCTAGGTGAA---------ACT------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------AATGTT------------------ACTTTGGCC---TTCGTTATTGGTATGGCTGGATGGTTATACATCATTTATGAGGTT---------------TTT------GCT---GGTGAAGCAAGTAAGGTAAGTGCTGGT------AGT---GGAAACGCTGCTGGA---CAA---GCC---GCA---TTT---AAT---GCATTG---AGACTGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---I-TSVAA-SL------------FWR-LLIASIIMLVGGYLGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKVSAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926897 [IV-Alpha7-HOT2C01] PRGD_OTU003_d7c9ee7d1a681657c4dfec4ae294a425 gb|KJ926897| PRGD_OTU003_d7c9ee7d1a681657c4dfec4ae294a425, putative proteorhodopsin gene, partial cds. PRGD_OTU003_d7c9ee7d1a681657c4dfec4ae294a425, putative proteorhodopsin gene, partial cds. KJ926897 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTGATAACTGTACCTCTACAGATTGTAGAATTCTATGTAATTCTTGCAGCGATAACTTCTGTTGCAGCAAGCCTTTTCTGGAGACTATTGATTGCATCAATTATCATGCTTGTCGGTGGTTACCTGGGTGAAACTGGAGCAATGAATGTTACTTTGGCCTTCATTATTGGTATGGCTGGATGGTTATACATCATTTATGAGGTTTTTGCTGGTGAAGCAAGTAAGGTAAGCGCTGGTAGTGGAAACCCTGCCGGACAAGCTGCATTTAATGCATTGAGATTGATCGTTACAGTT LITVPLQIVEFYVILAAITSVAASLFWRLLIASIIMLVGGYLGETGAMNVTLAFIIGMAGWLYIIYEVFAGEASKVSAGSGNPAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACTGTACCTCTACAGATTGTAGAATTCTATGTAATTCTTGCAGCG---------ATA---ACTTCTGTTGCAGCA---AGCCTT------------------------------------TTCTGGAGA---CTATTGATTGCATCAATTATCATGCTTGTCGGTGGTTACCTGGGTGAA---------ACT------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------AATGTT------------------ACTTTGGCC---TTCATTATTGGTATGGCTGGATGGTTATACATCATTTATGAGGTT---------------TTT------GCT---GGTGAAGCAAGTAAGGTAAGCGCTGGT------AGT---GGAAACCCTGCCGGA---CAA---GCT---GCA---TTT---AAT---GCATTG---AGATTGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---I-TSVAA-SL------------FWR-LLIASIIMLVGGYLGE---T------G--A-----------M----------------------NV------TLA-FIIGMAGWLYIIYEV-----F--A-GEASKVSAG--S-GNPAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926824 [IV-Alpha7-HOT2C01] PRGD_OTU003_67767579ec6efc39b5e40a441e518d91 gb|KJ926824| PRGD_OTU003_67767579ec6efc39b5e40a441e518d91, putative proteorhodopsin gene, partial cds. PRGD_OTU003_67767579ec6efc39b5e40a441e518d91, putative proteorhodopsin gene, partial cds. KJ926824 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) TTGATAACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCGATAACTTCTGTTGCAGCAAGCCTTTTCTGGAGACTATTGATTGCATCAATTATCATGCTTGTCGGTGGTTACCTTGGTGAAACTGGAGCAATGAATGTTACTTTGGCCTTCGTTATTGGTATGGCTGGATGGTTATACATCATTTATGAGGTTTTTGCTGGTGAAGCAAGTAAGGTAAGTGCTGGTAGTGGAAACGCTGCTGGACAAGCTGCATTTAATGCATTGAGACTGATCGTTACAGTT LITVPLQIVEFYVILAAITSVAASLFWRLLIASIIMLVGGYLGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKVSAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCG---------ATA---ACTTCTGTTGCAGCA---AGCCTT------------------------------------TTCTGGAGA---CTATTGATTGCATCAATTATCATGCTTGTCGGTGGTTACCTTGGTGAA---------ACT------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------AATGTT------------------ACTTTGGCC---TTCGTTATTGGTATGGCTGGATGGTTATACATCATTTATGAGGTT---------------TTT------GCT---GGTGAAGCAAGTAAGGTAAGTGCTGGT------AGT---GGAAACGCTGCTGGA---CAA---GCT---GCA---TTT---AAT---GCATTG---AGACTGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---I-TSVAA-SL------------FWR-LLIASIIMLVGGYLGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKVSAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926825 [IV-Alpha7-HOT2C01] PRGD_OTU003_67a189c9ceba4b99cd3f2d48ebd03328 gb|KJ926825| PRGD_OTU003_67a189c9ceba4b99cd3f2d48ebd03328, putative proteorhodopsin gene, partial cds. PRGD_OTU003_67a189c9ceba4b99cd3f2d48ebd03328, putative proteorhodopsin gene, partial cds. KJ926825 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTGATAACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCGATAACTTCTGTTGCAGCAAGCCTTTTCTGGAGACTATTGATTGCATCAATTATCATGCTTGTCGGTGGTTATCTGGGAGAGACTGGAGCAATGAATGTTACTTTGGCCTTCGTTATTGGTATGGCTGGATGGTTATACATCATTTATGAGGTTTTTGCTGGTGAAGCAAGTAAGGTAAGTGCTGGTAGTGGAAACGCTGCTGGACAAGCTGCATTTAATGCATTGAGACTGATCGTTACAGTT LITVPLQIVEFYVILAAITSVAASLFWRLLIASIIMLVGGYLGETGAMNVTLAFVIGMAGWLYIIYEVFAGEASKVSAGSGNAAGQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACTGTGCCTCTACAAATTGTAGAATTCTATGTAATTCTTGCAGCG---------ATA---ACTTCTGTTGCAGCA---AGCCTT------------------------------------TTCTGGAGA---CTATTGATTGCATCAATTATCATGCTTGTCGGTGGTTATCTGGGAGAG---------ACT------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------AATGTT------------------ACTTTGGCC---TTCGTTATTGGTATGGCTGGATGGTTATACATCATTTATGAGGTT---------------TTT------GCT---GGTGAAGCAAGTAAGGTAAGTGCTGGT------AGT---GGAAACGCTGCTGGA---CAA---GCT---GCA---TTT---AAT---GCATTG---AGACTGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---I-TSVAA-SL------------FWR-LLIASIIMLVGGYLGE---T------G--A-----------M----------------------NV------TLA-FVIGMAGWLYIIYEV-----F--A-GEASKVSAG--S-GNAAG-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Alpha7-HOT2C01]_KJ926898 [IV-Alpha7-HOT2C01] PRGD_OTU003_d868fa80d3acc40611c56a4dbf706302 gb|KJ926898| PRGD_OTU003_d868fa80d3acc40611c56a4dbf706302, putative proteorhodopsin gene, partial cds. PRGD_OTU003_d868fa80d3acc40611c56a4dbf706302, putative proteorhodopsin gene, partial cds. KJ926898 [[proteorhodopsin super-cluster IV/Alphaproteobacterial-like cluster 7/HOT2C01-like subcluster]] proteorhodopsin super-cluster IV Alphaproteobacterial-like cluster 7 HOT2C01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAATTACAGTACCTCTTCAAATTGTTGAGTTTTATGTAATTCTTGCTGCTGTCACAACTGTAGCTGTCGGGTTATTCTGGAGATTGCTAGTTGCATCTCTAGTAATGCTTGTTTTCGGTTATGTGGGTGAAACAGGAGCGTTAAATGCAACTTTAGCATTTGTCATTGGAATGGCAGCTTGGTTGTATATCGTTTACGAAATATTTGCAGGTGAAGCTAGTAAGGCGAATGCTGGAAGTGGAAATGCTGCTGGACAAGCAGCGTTTAACGCTTTGAGATGGATTGTTACAGTT LITVPLQIVEFYVILAAVTTVAVGLFWRLLVASLVMLVFGYVGETGALNATLAFVIGMAAWLYIVYEIFAGEASKANAGSGNAAGQAAFNALRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTACCTCTTCAAATTGTTGAGTTTTATGTAATTCTTGCTGCT---------GTC---ACAACTGTAGCTGTC---GGGTTA------------------------------------TTCTGGAGA---TTGCTAGTTGCATCTCTAGTAATGCTTGTTTTCGGTTATGTGGGTGAA---------ACA------------------GGA------GCG---------------------------------TTA------------------------------------------------------------------AATGCA------------------ACTTTAGCA---TTTGTCATTGGAATGGCAGCTTGGTTGTATATCGTTTACGAAATA---------------TTT------GCA---GGTGAAGCTAGTAAGGCGAATGCTGGA------AGT---GGAAATGCTGCTGGA---CAA---GCA---GCG---TTT---AAC---GCTTTG---AGATGGATTGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---V-TTVAV-GL------------FWR-LLVASLVMLVFGYVGE---T------G--A-----------L----------------------NA------TLA-FVIGMAAWLYIVYEI-----F--A-GEASKANAG--S-GNAAG-Q-A-A-F-N-AL-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927887 [IV-Proteo3-HF10_19P19] PRGD_OTU019_1aecb3a12fbab9e38a9452cc8c1f5683 gb|KJ927887| PRGD_OTU019_1aecb3a12fbab9e38a9452cc8c1f5683, putative proteorhodopsin gene, partial cds. PRGD_OTU019_1aecb3a12fbab9e38a9452cc8c1f5683, putative proteorhodopsin gene, partial cds. KJ927887 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTAATCACGGTGCCTCTGCAGATGATTGAATTCTACCTTATTCTAGCTGCCTGCACTGCCATTGCTGTTGGTGTCTTCTGGCGCCTCATGATCGGTACGATGGTGATGTTAATTGGCGGATATTTAGGTGAGGCTGGTTTCATCAACTCTACGGTTGGTTTTGTGATCGGAATGGCCGGTTGGGGATATATATTGTATGAAATCTTTGCTGGTGAAGCTGGCAAGGTTGCTGCAGAAGGTGCACCCCCATCTGTGCAATCAGCTTTCAACACAATGCGTCTGATCGTGACTATT LITVPLQMIEFYLILAACTAIAVGVFWRLMIGTMVMLIGGYLGEAGFINSTVGFVIGMAGWGYILYEIFAGEAGKVAAEGAPPSVQSAFNTMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACGGTGCCTCTGCAGATGATTGAATTCTACCTTATTCTAGCTGCC---------TGC---ACTGCCATTGCTGTT---GGTGTC------------------------------------TTCTGGCGC---CTCATGATCGGTACGATGGTGATGTTAATTGGCGGATATTTAGGTGAG---------GCT------------------GGT------TTC---------------------------------ATC------------------------------------------------------------------AACTCT------------------ACGGTTGGT---TTTGTGATCGGAATGGCCGGTTGGGGATATATATTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTTGCTGCAGAA------GGT---GCACCCCCATCTGTG---CAA---TCA---GCT---TTC---AAC---ACAATG---CGTCTGATCGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAIAV-GV------------FWR-LMIGTMVMLIGGYLGE---A------G--F-----------I----------------------NS------TVG-FVIGMAGWGYILYEI-----F--A-GEAGKVAAE--G-APPSV-Q-S-A-F-N-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927897 [IV-Proteo3-HF10_19P19] PRGD_OTU019_5500d693597185a3a153be6101c620b7 gb|KJ927897| PRGD_OTU019_5500d693597185a3a153be6101c620b7, putative proteorhodopsin gene, partial cds. PRGD_OTU019_5500d693597185a3a153be6101c620b7, putative proteorhodopsin gene, partial cds. KJ927897 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-14.48, 113.45) CTAATCACAGTGCCTCTGCAGATGATTGAATTCTACCTTATTCTAGCTGCCTGTACTGCCATTGCTGTTGGCGTCTTCTGGCGCCTCATGATCGGTACTATGGTAATGTTAATTGGCGGATATTTAGGTGAGGCTGGTTTCATTAACTCTACGGTTGGTTTCGTGATCGGAATGGCCGGTTGGGGATACATTCTGTATGAAATCTTTGCTGGTGAAGCTGGCAAAGTTGCCGCAGAAGGAGCACCCCCATCTGTGCAATCAGCTTTCAACACAATGCGTCTGATTGTGACTATT LITVPLQMIEFYLILAACTAIAVGVFWRLMIGTMVMLIGGYLGEAGFINSTVGFVIGMAGWGYILYEIFAGEAGKVAAEGAPPSVQSAFNTMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACAGTGCCTCTGCAGATGATTGAATTCTACCTTATTCTAGCTGCC---------TGT---ACTGCCATTGCTGTT---GGCGTC------------------------------------TTCTGGCGC---CTCATGATCGGTACTATGGTAATGTTAATTGGCGGATATTTAGGTGAG---------GCT------------------GGT------TTC---------------------------------ATT------------------------------------------------------------------AACTCT------------------ACGGTTGGT---TTCGTGATCGGAATGGCCGGTTGGGGATACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCAAAGTTGCCGCAGAA------GGA---GCACCCCCATCTGTG---CAA---TCA---GCT---TTC---AAC---ACAATG---CGTCTGATTGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAIAV-GV------------FWR-LMIGTMVMLIGGYLGE---A------G--F-----------I----------------------NS------TVG-FVIGMAGWGYILYEI-----F--A-GEAGKVAAE--G-APPSV-Q-S-A-F-N-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927886 [IV-Proteo3-HF10_19P19] PRGD_OTU019_153c5a403c1195f5870dc43bb61f6e0e gb|KJ927886| PRGD_OTU019_153c5a403c1195f5870dc43bb61f6e0e, putative proteorhodopsin gene, partial cds. PRGD_OTU019_153c5a403c1195f5870dc43bb61f6e0e, putative proteorhodopsin gene, partial cds. KJ927886 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTAATCACAGTACCTTTGCAGATGATTGAATTCTACCTTATTCTAGCTGCCTGTACTGCCATTGCTGTTGGCGTCTTCTGGCGCCTCATGATCGGCACAATGGTAATGTTAATTGGCGGATATTTAGGTGAGGCTGGTTTCATCAACGCTACGGTTGGTTTTGTGATCGGAATGGCCGGTTGGGGATACATATTGTATGAAATCTTTGCTGGTGAAGCTGGAAAGGTTGCTGCAGAAGGTGCACCCGCATCTGTGCAATCAGCTTTCAACACAATGCGTCTGATTGTGACTATT LITVPLQMIEFYLILAACTAIAVGVFWRLMIGTMVMLIGGYLGEAGFINATVGFVIGMAGWGYILYEIFAGEAGKVAAEGAPASVQSAFNTMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACAGTACCTTTGCAGATGATTGAATTCTACCTTATTCTAGCTGCC---------TGT---ACTGCCATTGCTGTT---GGCGTC------------------------------------TTCTGGCGC---CTCATGATCGGCACAATGGTAATGTTAATTGGCGGATATTTAGGTGAG---------GCT------------------GGT------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACGGTTGGT---TTTGTGATCGGAATGGCCGGTTGGGGATACATATTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGAAAGGTTGCTGCAGAA------GGT---GCACCCGCATCTGTG---CAA---TCA---GCT---TTC---AAC---ACAATG---CGTCTGATTGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAIAV-GV------------FWR-LMIGTMVMLIGGYLGE---A------G--F-----------I----------------------NA------TVG-FVIGMAGWGYILYEI-----F--A-GEAGKVAAE--G-APASV-Q-S-A-F-N-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927903 [IV-Proteo3-HF10_19P19] PRGD_OTU019_908ad992242fea00bdd2af04548f97d3 gb|KJ927903| PRGD_OTU019_908ad992242fea00bdd2af04548f97d3, putative proteorhodopsin gene, partial cds. PRGD_OTU019_908ad992242fea00bdd2af04548f97d3, putative proteorhodopsin gene, partial cds. KJ927903 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTAATCACAGTGCCTCTGCAGATGATTGAATTCTACCTTATTCTAGCTGCCTGTACTGCTATTGCTGTTGGCGTCTTCTGGCGCCTCATGATCGGCACAATGGTAATGTTAATCGGCGGATATTTAGGTGAGGCTGGCTTCATCAACGCTACGGTTGGTTTCGTGATCGGAATGGCCGGTTGGGGATATATATTGTATGAAATCTTTGCTGGCGAAGCTGGCAAGGTTGCTGCAGAAGGTGCACCCCCATCTGTGCAATCAGCTTTCAATACAATGCGTCTGATTGTGACTATT LITVPLQMIEFYLILAACTAIAVGVFWRLMIGTMVMLIGGYLGEAGFINATVGFVIGMAGWGYILYEIFAGEAGKVAAEGAPPSVQSAFNTMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACAGTGCCTCTGCAGATGATTGAATTCTACCTTATTCTAGCTGCC---------TGT---ACTGCTATTGCTGTT---GGCGTC------------------------------------TTCTGGCGC---CTCATGATCGGCACAATGGTAATGTTAATCGGCGGATATTTAGGTGAG---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACGGTTGGT---TTCGTGATCGGAATGGCCGGTTGGGGATATATATTGTATGAAATC---------------TTT------GCT---GGCGAAGCTGGCAAGGTTGCTGCAGAA------GGT---GCACCCCCATCTGTG---CAA---TCA---GCT---TTC---AAT---ACAATG---CGTCTGATTGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAIAV-GV------------FWR-LMIGTMVMLIGGYLGE---A------G--F-----------I----------------------NA------TVG-FVIGMAGWGYILYEI-----F--A-GEAGKVAAE--G-APPSV-Q-S-A-F-N-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927913 [IV-Proteo3-HF10_19P19] PRGD_OTU019_ad473f0457de782447df5d06387f3a3d gb|KJ927913| PRGD_OTU019_ad473f0457de782447df5d06387f3a3d, putative proteorhodopsin gene, partial cds. PRGD_OTU019_ad473f0457de782447df5d06387f3a3d, putative proteorhodopsin gene, partial cds. KJ927913 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTAATCACAGTGCCTCTGCAGATGATTGAATTCTACCTTATTCTAGCTGCCTGTACTGCTATTGCTGTTGGCGTCTTCTGGCGCCTCATGATCGGCACAATGGTAATGTTAGTCGGCGGATATTTAGGTGAGGCTGGCTTCATCAACGCCACGGTTGGTTTCGTGATCGGAATGGCCGGTTGGGGATATATATTGTATGAAATCTTTGCTGGCGAAGCTGGCAAGGTTGCCGCAGAAGGTGCACCCCCATCTGTGCAATCAGCTTTCAATACAATGCGTCTGATTGTGACTATT LITVPLQMIEFYLILAACTAIAVGVFWRLMIGTMVMLVGGYLGEAGFINATVGFVIGMAGWGYILYEIFAGEAGKVAAEGAPPSVQSAFNTMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACAGTGCCTCTGCAGATGATTGAATTCTACCTTATTCTAGCTGCC---------TGT---ACTGCTATTGCTGTT---GGCGTC------------------------------------TTCTGGCGC---CTCATGATCGGCACAATGGTAATGTTAGTCGGCGGATATTTAGGTGAG---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCC------------------ACGGTTGGT---TTCGTGATCGGAATGGCCGGTTGGGGATATATATTGTATGAAATC---------------TTT------GCT---GGCGAAGCTGGCAAGGTTGCCGCAGAA------GGT---GCACCCCCATCTGTG---CAA---TCA---GCT---TTC---AAT---ACAATG---CGTCTGATTGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAIAV-GV------------FWR-LMIGTMVMLVGGYLGE---A------G--F-----------I----------------------NA------TVG-FVIGMAGWGYILYEI-----F--A-GEAGKVAAE--G-APPSV-Q-S-A-F-N-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927908 [IV-Proteo3-HF10_19P19] PRGD_OTU019_9e268e7792950bfe38179dddae076333 gb|KJ927908| PRGD_OTU019_9e268e7792950bfe38179dddae076333, putative proteorhodopsin gene, partial cds. PRGD_OTU019_9e268e7792950bfe38179dddae076333, putative proteorhodopsin gene, partial cds. KJ927908 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) CTAATCACAGTGCCTCTGCAGATGATTGAATTCTACCTTATTCTAGCTGCCTGTACTGCCATTGCTGTTGGCGTCTTCTGGCGCCTCATGATCGGTACAATGGTCATGTTAATCGGCGGATATTTAGGTGAGGCTGGCTTCATCAACGCTACGGTTGGTTTCGTAATCGGAATGGCCGGTTGGGGATATATATTGTATGAAATCTTTGCTGGTGAAGCCGGCAAGGTTGCTGCAGAAGGTGCACCGCCATCTGTGCAATCAGCTTTCAATACAATGCGTCTGATTGTGACTATT LITVPLQMIEFYLILAACTAIAVGVFWRLMIGTMVMLIGGYLGEAGFINATVGFVIGMAGWGYILYEIFAGEAGKVAAEGAPPSVQSAFNTMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACAGTGCCTCTGCAGATGATTGAATTCTACCTTATTCTAGCTGCC---------TGT---ACTGCCATTGCTGTT---GGCGTC------------------------------------TTCTGGCGC---CTCATGATCGGTACAATGGTCATGTTAATCGGCGGATATTTAGGTGAG---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACGGTTGGT---TTCGTAATCGGAATGGCCGGTTGGGGATATATATTGTATGAAATC---------------TTT------GCT---GGTGAAGCCGGCAAGGTTGCTGCAGAA------GGT---GCACCGCCATCTGTG---CAA---TCA---GCT---TTC---AAT---ACAATG---CGTCTGATTGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAIAV-GV------------FWR-LMIGTMVMLIGGYLGE---A------G--F-----------I----------------------NA------TVG-FVIGMAGWGYILYEI-----F--A-GEAGKVAAE--G-APPSV-Q-S-A-F-N-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927890 [IV-Proteo3-HF10_19P19] PRGD_OTU019_2587be2b92f79775643ed7d09d579d3e gb|KJ927890| PRGD_OTU019_2587be2b92f79775643ed7d09d579d3e, putative proteorhodopsin gene, partial cds. PRGD_OTU019_2587be2b92f79775643ed7d09d579d3e, putative proteorhodopsin gene, partial cds. KJ927890 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATAACAGTGCCTTTGCAGATGATTGAATTCTACCTTATTCTAGCTGCCTGTACTGCGATTGCTGTTGGCGTCTTCTGGCGTCTCATGGTCGGTACGATGGTAATGTTAGTTGGAGGATATTTAGGTGAGGCTGGCTTCATAAACGCTACGGTTGGTTTCGTGATCGGAATGGCCGGTTGGGGTTATATATTGTATGAAATCTTTGCCGGTGAAGCTGGAAAGGTTGCTGCAGAAGGTGCACCCCCATCTGTGCAATCAGCTTTCAACACAATGCGTCTAATTGTGACCATT LITVPLQMIEFYLILAACTAIAVGVFWRLMVGTMVMLVGGYLGEAGFINATVGFVIGMAGWGYILYEIFAGEAGKVAAEGAPPSVQSAFNTMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATAACAGTGCCTTTGCAGATGATTGAATTCTACCTTATTCTAGCTGCC---------TGT---ACTGCGATTGCTGTT---GGCGTC------------------------------------TTCTGGCGT---CTCATGGTCGGTACGATGGTAATGTTAGTTGGAGGATATTTAGGTGAG---------GCT------------------GGC------TTC---------------------------------ATA------------------------------------------------------------------AACGCT------------------ACGGTTGGT---TTCGTGATCGGAATGGCCGGTTGGGGTTATATATTGTATGAAATC---------------TTT------GCC---GGTGAAGCTGGAAAGGTTGCTGCAGAA------GGT---GCACCCCCATCTGTG---CAA---TCA---GCT---TTC---AAC---ACAATG---CGTCTAATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAIAV-GV------------FWR-LMVGTMVMLVGGYLGE---A------G--F-----------I----------------------NA------TVG-FVIGMAGWGYILYEI-----F--A-GEAGKVAAE--G-APPSV-Q-S-A-F-N-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927894 [IV-Proteo3-HF10_19P19] PRGD_OTU019_3d21bc96ec8c8d30166d1e1150c31cda gb|KJ927894| PRGD_OTU019_3d21bc96ec8c8d30166d1e1150c31cda, putative proteorhodopsin gene, partial cds. PRGD_OTU019_3d21bc96ec8c8d30166d1e1150c31cda, putative proteorhodopsin gene, partial cds. KJ927894 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATAACAGTGCCGTTGCAGATGATTGAATTCTACCTTATTCTAGCTGCCTGTACTGCCATTGCTGTTGGCGTCTTCTGGCGCCTTATGGTCGGTACGATGGTAATGTTAGTTGGCGGCTATTTAGGTGAGGCTGGCTTCATTAATGCTACGGTTGGTTTCGTGATCGGAATGGCCGGTTGGGGTTATATATTGTATGAAATCTTTGCCGGTGAAGCTGGTAAGGTTGCTGCAGAAGGTGCACCCCCATCTGTGCAATCAGCTTTCAACACAATGCGTCTAATCGTGACCATC LITVPLQMIEFYLILAACTAIAVGVFWRLMVGTMVMLVGGYLGEAGFINATVGFVIGMAGWGYILYEIFAGEAGKVAAEGAPPSVQSAFNTMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATAACAGTGCCGTTGCAGATGATTGAATTCTACCTTATTCTAGCTGCC---------TGT---ACTGCCATTGCTGTT---GGCGTC------------------------------------TTCTGGCGC---CTTATGGTCGGTACGATGGTAATGTTAGTTGGCGGCTATTTAGGTGAG---------GCT------------------GGC------TTC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACGGTTGGT---TTCGTGATCGGAATGGCCGGTTGGGGTTATATATTGTATGAAATC---------------TTT------GCC---GGTGAAGCTGGTAAGGTTGCTGCAGAA------GGT---GCACCCCCATCTGTG---CAA---TCA---GCT---TTC---AAC---ACAATG---CGTCTAATCGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAIAV-GV------------FWR-LMVGTMVMLVGGYLGE---A------G--F-----------I----------------------NA------TVG-FVIGMAGWGYILYEI-----F--A-GEAGKVAAE--G-APPSV-Q-S-A-F-N-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927899 [IV-Proteo3-HF10_19P19] PRGD_OTU019_60075a1efc5728dcb4a325f3abea6d50 gb|KJ927899| PRGD_OTU019_60075a1efc5728dcb4a325f3abea6d50, putative proteorhodopsin gene, partial cds. PRGD_OTU019_60075a1efc5728dcb4a325f3abea6d50, putative proteorhodopsin gene, partial cds. KJ927899 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683) CTAATCACAGTGCCATTGCAGATGATTGAATTCTACCTTATTCTAGCTGCCTGTACTGCCATTGCTGTTGGCGTCTTCTGGCGCCTCATGGTTGGAACGATGGTAATGTTAGTTGGCGGATATTTAGGTGAGGCTGGCTTCATCAACGCTACGGTTGGTTTCGTGATCGGAATGGCCGGTTGGGGTTATATATTGTATGAAATCTTTGCCGGTGAAGCTGGTAAGGTTGCAGCAGAAGGTGCACCCCCATCTGTGCAATCAGCTTTTAACACAATGCGTCTAATTGTGACCATT LITVPLQMIEFYLILAACTAIAVGVFWRLMVGTMVMLVGGYLGEAGFINATVGFVIGMAGWGYILYEIFAGEAGKVAAEGAPPSVQSAFNTMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACAGTGCCATTGCAGATGATTGAATTCTACCTTATTCTAGCTGCC---------TGT---ACTGCCATTGCTGTT---GGCGTC------------------------------------TTCTGGCGC---CTCATGGTTGGAACGATGGTAATGTTAGTTGGCGGATATTTAGGTGAG---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACGGTTGGT---TTCGTGATCGGAATGGCCGGTTGGGGTTATATATTGTATGAAATC---------------TTT------GCC---GGTGAAGCTGGTAAGGTTGCAGCAGAA------GGT---GCACCCCCATCTGTG---CAA---TCA---GCT---TTT---AAC---ACAATG---CGTCTAATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAIAV-GV------------FWR-LMVGTMVMLVGGYLGE---A------G--F-----------I----------------------NA------TVG-FVIGMAGWGYILYEI-----F--A-GEAGKVAAE--G-APPSV-Q-S-A-F-N-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927912 [IV-Proteo3-HF10_19P19] PRGD_OTU019_a616493d53339af0869262399c7543fc gb|KJ927912| PRGD_OTU019_a616493d53339af0869262399c7543fc, putative proteorhodopsin gene, partial cds. PRGD_OTU019_a616493d53339af0869262399c7543fc, putative proteorhodopsin gene, partial cds. KJ927912 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATTACAGTGCCTCTGCAGATGATTGAATTCTACCTTATTCTAGCTGCTTGTACTGCCATTGCTGTTGGCGTCTTCTGGCGCCTCATGATCGGTACAATGATAATGTTAATTGGCGGTTATTTAGGTGAGGCTGGCTTCATCAACTCTACAGTTGGTTTCGTGATCGGAATGGCCGGATGGGGATATATATTGTATGAAATCTTTGCCGGTGAAGCTGGCAAGGTTGCTGCAGAAGGGGCACCCCCGTCTGTGCAATCAGCTTTCAATACAATGCGTCTAATTGTGACCATT LITVPLQMIEFYLILAACTAIAVGVFWRLMIGTMIMLIGGYLGEAGFINSTVGFVIGMAGWGYILYEIFAGEAGKVAAEGAPPSVQSAFNTMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTGCCTCTGCAGATGATTGAATTCTACCTTATTCTAGCTGCT---------TGT---ACTGCCATTGCTGTT---GGCGTC------------------------------------TTCTGGCGC---CTCATGATCGGTACAATGATAATGTTAATTGGCGGTTATTTAGGTGAG---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACTCT------------------ACAGTTGGT---TTCGTGATCGGAATGGCCGGATGGGGATATATATTGTATGAAATC---------------TTT------GCC---GGTGAAGCTGGCAAGGTTGCTGCAGAA------GGG---GCACCCCCGTCTGTG---CAA---TCA---GCT---TTC---AAT---ACAATG---CGTCTAATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAIAV-GV------------FWR-LMIGTMIMLIGGYLGE---A------G--F-----------I----------------------NS------TVG-FVIGMAGWGYILYEI-----F--A-GEAGKVAAE--G-APPSV-Q-S-A-F-N-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927884 [IV-Proteo3-HF10_19P19] PRGD_OTU019_0adf332ddd46c2f8c81b31f400b0b1dc gb|KJ927884| PRGD_OTU019_0adf332ddd46c2f8c81b31f400b0b1dc, putative proteorhodopsin gene, partial cds. PRGD_OTU019_0adf332ddd46c2f8c81b31f400b0b1dc, putative proteorhodopsin gene, partial cds. KJ927884 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATCACAGTGCCTCTGCAGATGATTGAATTCTACCTTATTCTAGCCGCCTGTACTGCCATTGCTGTTGGCGTCTTCTGGCGCCTCATGATCGGCACAATGGTCATGTTAATTGGCGGATATCTAGGTGAGGCTGGCTTCATCAACGCTACGGTTGGTTTCGTGATCGGAATGGCCGGTTGGGGATATATATTGTATGAAATCTTCGCTGGTGAAGCTGGCAAGGTTGCTGCAGAAGGAGCACCCCCATCTGTGCAATCAGCTTTCAATACAATGCGTCTGATTGTGACTATT LITVPLQMIEFYLILAACTAIAVGVFWRLMIGTMVMLIGGYLGEAGFINATVGFVIGMAGWGYILYEIFAGEAGKVAAEGAPPSVQSAFNTMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACAGTGCCTCTGCAGATGATTGAATTCTACCTTATTCTAGCCGCC---------TGT---ACTGCCATTGCTGTT---GGCGTC------------------------------------TTCTGGCGC---CTCATGATCGGCACAATGGTCATGTTAATTGGCGGATATCTAGGTGAG---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACGGTTGGT---TTCGTGATCGGAATGGCCGGTTGGGGATATATATTGTATGAAATC---------------TTC------GCT---GGTGAAGCTGGCAAGGTTGCTGCAGAA------GGA---GCACCCCCATCTGTG---CAA---TCA---GCT---TTC---AAT---ACAATG---CGTCTGATTGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAIAV-GV------------FWR-LMIGTMVMLIGGYLGE---A------G--F-----------I----------------------NA------TVG-FVIGMAGWGYILYEI-----F--A-GEAGKVAAE--G-APPSV-Q-S-A-F-N-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927902 [IV-Proteo3-HF10_19P19] PRGD_OTU019_8e625900c695a20a2f3a6feb3a76d0da gb|KJ927902| PRGD_OTU019_8e625900c695a20a2f3a6feb3a76d0da, putative proteorhodopsin gene, partial cds. PRGD_OTU019_8e625900c695a20a2f3a6feb3a76d0da, putative proteorhodopsin gene, partial cds. KJ927902 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45; -33.28, 45.35) CTGATCACAGTGCCTCTGCAGATGATTGAATTCTACCTTATTCTAGCCGCCTGTACTGCCATTGCTGTTGGCGTCTTCTGGCGCCTCATGGTCGGTACAATGGTCATGTTAATTGGCGGATATCTAGGTGAGGCTGGCTTCATCAACGCTACGGTTGGTTTCGTGATCGGAATGGCAGGTTGGGGATATATATTGTATGAAATCTTCGCTGGTGAAGCTGGCAAGGTTGCTGCAGAAGGAGCACCCCCATCTGTGCAATCAGCTTTCAATACAATGCGTCTAATTGTGACTATT LITVPLQMIEFYLILAACTAIAVGVFWRLMVGTMVMLIGGYLGEAGFINATVGFVIGMAGWGYILYEIFAGEAGKVAAEGAPPSVQSAFNTMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTGCCTCTGCAGATGATTGAATTCTACCTTATTCTAGCCGCC---------TGT---ACTGCCATTGCTGTT---GGCGTC------------------------------------TTCTGGCGC---CTCATGGTCGGTACAATGGTCATGTTAATTGGCGGATATCTAGGTGAG---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACGGTTGGT---TTCGTGATCGGAATGGCAGGTTGGGGATATATATTGTATGAAATC---------------TTC------GCT---GGTGAAGCTGGCAAGGTTGCTGCAGAA------GGA---GCACCCCCATCTGTG---CAA---TCA---GCT---TTC---AAT---ACAATG---CGTCTAATTGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAIAV-GV------------FWR-LMVGTMVMLIGGYLGE---A------G--F-----------I----------------------NA------TVG-FVIGMAGWGYILYEI-----F--A-GEAGKVAAE--G-APPSV-Q-S-A-F-N-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927923 [IV-Proteo3-HF10_19P19] PRGD_OTU019_dcbec97ed6eae0bd7bd15baeedbe3f98 gb|KJ927923| PRGD_OTU019_dcbec97ed6eae0bd7bd15baeedbe3f98, putative proteorhodopsin gene, partial cds. PRGD_OTU019_dcbec97ed6eae0bd7bd15baeedbe3f98, putative proteorhodopsin gene, partial cds. KJ927923 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683), Mediterranean Sea (33.935, 18.508) CTAATCACAGTGCCTCTGCAGATGATTGAATTTTACCTTATTCTAGCTGCCTGTACTGCCATCGCTGTTGGCGTCTTCTGGCGCCTCATGGTCGGTACAATGGTCATGTTAATTGGCGGATATTTAGGCGAGGCTGGCTTCATCAACGCTACGGTTGGTTTCGTGATCGGAATGGCCGGTTGGGGATATATATTGTATGAAATCTTCGCTGGTGAAGCTGGCAAGGTTGCTGCAGAAGGTGCACCCCCATCTGTGCAATCAGCTTTCAATACAATGCGTCTGATTGTGACTATT LITVPLQMIEFYLILAACTAIAVGVFWRLMVGTMVMLIGGYLGEAGFINATVGFVIGMAGWGYILYEIFAGEAGKVAAEGAPPSVQSAFNTMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACAGTGCCTCTGCAGATGATTGAATTTTACCTTATTCTAGCTGCC---------TGT---ACTGCCATCGCTGTT---GGCGTC------------------------------------TTCTGGCGC---CTCATGGTCGGTACAATGGTCATGTTAATTGGCGGATATTTAGGCGAG---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACGGTTGGT---TTCGTGATCGGAATGGCCGGTTGGGGATATATATTGTATGAAATC---------------TTC------GCT---GGTGAAGCTGGCAAGGTTGCTGCAGAA------GGT---GCACCCCCATCTGTG---CAA---TCA---GCT---TTC---AAT---ACAATG---CGTCTGATTGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAIAV-GV------------FWR-LMVGTMVMLIGGYLGE---A------G--F-----------I----------------------NA------TVG-FVIGMAGWGYILYEI-----F--A-GEAGKVAAE--G-APPSV-Q-S-A-F-N-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927904 [IV-Proteo3-HF10_19P19] PRGD_OTU019_91c4dbe816837dbd624429e135847f29 gb|KJ927904| PRGD_OTU019_91c4dbe816837dbd624429e135847f29, putative proteorhodopsin gene, partial cds. PRGD_OTU019_91c4dbe816837dbd624429e135847f29, putative proteorhodopsin gene, partial cds. KJ927904 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTAATCACAGTGCCTCTGCAGATGATTGAATTCTACCTTATTCTAGCTGCCTGTACTGCTATTGCTGTTGGCGTCTTCTGGCGCCTCATGATCGGTACAATGGTAATGTTAATTGGCGGATATTTAGGTGAGGCTGGTTTCATCAACGCTACGGTTGGTTTCGTGATCGGAATGGCCGGTTGGGGATATATATTGTATGAAATCTTTGCCGGTGAAGCTGGCAAAGTTGCTGCAGAAGGTGCACCTCCATCTGTGCAATCAGCTTTCAATACAATGCGTCTAATTGTGACTATT LITVPLQMIEFYLILAACTAIAVGVFWRLMIGTMVMLIGGYLGEAGFINATVGFVIGMAGWGYILYEIFAGEAGKVAAEGAPPSVQSAFNTMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACAGTGCCTCTGCAGATGATTGAATTCTACCTTATTCTAGCTGCC---------TGT---ACTGCTATTGCTGTT---GGCGTC------------------------------------TTCTGGCGC---CTCATGATCGGTACAATGGTAATGTTAATTGGCGGATATTTAGGTGAG---------GCT------------------GGT------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACGGTTGGT---TTCGTGATCGGAATGGCCGGTTGGGGATATATATTGTATGAAATC---------------TTT------GCC---GGTGAAGCTGGCAAAGTTGCTGCAGAA------GGT---GCACCTCCATCTGTG---CAA---TCA---GCT---TTC---AAT---ACAATG---CGTCTAATTGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAIAV-GV------------FWR-LMIGTMVMLIGGYLGE---A------G--F-----------I----------------------NA------TVG-FVIGMAGWGYILYEI-----F--A-GEAGKVAAE--G-APPSV-Q-S-A-F-N-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927924 [IV-Proteo3-HF10_19P19] PRGD_OTU019_e799e3461eff5f5efc07f5d91e8e81b0 gb|KJ927924| PRGD_OTU019_e799e3461eff5f5efc07f5d91e8e81b0, putative proteorhodopsin gene, partial cds. PRGD_OTU019_e799e3461eff5f5efc07f5d91e8e81b0, putative proteorhodopsin gene, partial cds. KJ927924 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) CTAATCACAGTGCCTCTGCAGATGATTGAATTCTACCTTATTCTAGCTGCCTGTACTGCCATTGCGGTTGGCGTCTTCTGGCGCCTTATGATCGGTACAATGGTAATGTTAATTGGCGGATATTTAGGTGAGGCTGGCTTCATCAACGCTACGGTTGGTTTTGTGATTGGAATGGCCGGTTGGGGATATATATTGTATGAAATCTTTGCTGGTGAAGCTGGCAAGGTTGCTGCAGAAGGCGCACCCCCATCTGTACAATCAGCTTTCAACACAATGCGTCTAATTGTGACTATT LITVPLQMIEFYLILAACTAIAVGVFWRLMIGTMVMLIGGYLGEAGFINATVGFVIGMAGWGYILYEIFAGEAGKVAAEGAPPSVQSAFNTMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACAGTGCCTCTGCAGATGATTGAATTCTACCTTATTCTAGCTGCC---------TGT---ACTGCCATTGCGGTT---GGCGTC------------------------------------TTCTGGCGC---CTTATGATCGGTACAATGGTAATGTTAATTGGCGGATATTTAGGTGAG---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACGGTTGGT---TTTGTGATTGGAATGGCCGGTTGGGGATATATATTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTTGCTGCAGAA------GGC---GCACCCCCATCTGTA---CAA---TCA---GCT---TTC---AAC---ACAATG---CGTCTAATTGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAIAV-GV------------FWR-LMIGTMVMLIGGYLGE---A------G--F-----------I----------------------NA------TVG-FVIGMAGWGYILYEI-----F--A-GEAGKVAAE--G-APPSV-Q-S-A-F-N-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927892 [IV-Proteo3-HF10_19P19] PRGD_OTU019_37f3a28707f1eba303812fe71a72c0a6 gb|KJ927892| PRGD_OTU019_37f3a28707f1eba303812fe71a72c0a6, putative proteorhodopsin gene, partial cds. PRGD_OTU019_37f3a28707f1eba303812fe71a72c0a6, putative proteorhodopsin gene, partial cds. KJ927892 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683) CTAATTACAGTGCCTCTGCAGATGATTGAGTTCTACCTAATCTTAGCTGCCTGTACTGCGATTGCAGTTGGTGTCTTCTGGCGCCTAATGGTCGGTACAATGGTAATGCTTGTTGGCGGTTATTTAGGTGAGGCTGGCTTCATCAACGCTACCGTTGGTTTCGTGATCGGTATGGCCGGTTGGGGATATATCTTGTATGAAATTTTTGCTGGTGAAGCTGGCAAGGTTGCTGCTGATAGTGCACCCCCGTCCGTGCAATCAGCCTTCAACACAATGCGTCTGATTGTGACTGTT LITVPLQMIEFYLILAACTAIAVGVFWRLMVGTMVMLVGGYLGEAGFINATVGFVIGMAGWGYILYEIFAGEAGKVAADSAPPSVQSAFNTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTGCCTCTGCAGATGATTGAGTTCTACCTAATCTTAGCTGCC---------TGT---ACTGCGATTGCAGTT---GGTGTC------------------------------------TTCTGGCGC---CTAATGGTCGGTACAATGGTAATGCTTGTTGGCGGTTATTTAGGTGAG---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACCGTTGGT---TTCGTGATCGGTATGGCCGGTTGGGGATATATCTTGTATGAAATT---------------TTT------GCT---GGTGAAGCTGGCAAGGTTGCTGCTGAT------AGT---GCACCCCCGTCCGTG---CAA---TCA---GCC---TTC---AAC---ACAATG---CGTCTGATTGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAIAV-GV------------FWR-LMVGTMVMLVGGYLGE---A------G--F-----------I----------------------NA------TVG-FVIGMAGWGYILYEI-----F--A-GEAGKVAAD--S-APPSV-Q-S-A-F-N-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927918 [IV-Proteo3-HF10_19P19] PRGD_OTU019_c68aaca7cca5b317aded327f1901f0f7 gb|KJ927918| PRGD_OTU019_c68aaca7cca5b317aded327f1901f0f7, putative proteorhodopsin gene, partial cds. PRGD_OTU019_c68aaca7cca5b317aded327f1901f0f7, putative proteorhodopsin gene, partial cds. KJ927918 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATTACAGTGCCTCTGCAGATGATTGAGTTCTACCTCATCTTAGCTGCCTGTACTGCGATTGCGGTTGGTGTCTTCTGGCGCCTAATGGTCGGTACAATGGTAATGCTAGTTGGCGGTTATTTAGGTGAGGCTGGCTTCATCAACGCGACCGTTGGTTTCGTTATCGGTATGGCCGGTTGGGGATATATCTTGTATGAAATTTTTGCTGGTGAAGCTGGCAAAGTTGCTGCTGATAGTGCACCCCCGTCCGTGCAATCAGCCTTCAACACAATGCGTCTGATTGTGACTGTT LITVPLQMIEFYLILAACTAIAVGVFWRLMVGTMVMLVGGYLGEAGFINATVGFVIGMAGWGYILYEIFAGEAGKVAADSAPPSVQSAFNTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTGCCTCTGCAGATGATTGAGTTCTACCTCATCTTAGCTGCC---------TGT---ACTGCGATTGCGGTT---GGTGTC------------------------------------TTCTGGCGC---CTAATGGTCGGTACAATGGTAATGCTAGTTGGCGGTTATTTAGGTGAG---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCG------------------ACCGTTGGT---TTCGTTATCGGTATGGCCGGTTGGGGATATATCTTGTATGAAATT---------------TTT------GCT---GGTGAAGCTGGCAAAGTTGCTGCTGAT------AGT---GCACCCCCGTCCGTG---CAA---TCA---GCC---TTC---AAC---ACAATG---CGTCTGATTGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAIAV-GV------------FWR-LMVGTMVMLVGGYLGE---A------G--F-----------I----------------------NA------TVG-FVIGMAGWGYILYEI-----F--A-GEAGKVAAD--S-APPSV-Q-S-A-F-N-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927891 [IV-Proteo3-HF10_19P19] PRGD_OTU019_2e3e9eaa5d41aaae373c6b310828a365 gb|KJ927891| PRGD_OTU019_2e3e9eaa5d41aaae373c6b310828a365, putative proteorhodopsin gene, partial cds. PRGD_OTU019_2e3e9eaa5d41aaae373c6b310828a365, putative proteorhodopsin gene, partial cds. KJ927891 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-23.5956, 69.0419) CTAATCACTGTGCCTCTGCAGATGATTGAGTTTTACCTCATCTTAGCTGCTTGTACAGCGATTGCAGTTGGTGTCTTCTGGCGCCTAATGGTCGGTACAATGGTAATGTTAGTTGGCGGATATTTAGGTGAGGCTGGCTTCATCAACGCTACAGTTGGCTTCGTGATCGGCCTGGCCGGTTGGGGATATATCTTGTATGAGATTTTTGCTGGTGAAGCCGGCAAGGTGGCTGCAGATAGCGCACCCCCGTCCGTGCAATCAGCCTTCAATACAATGCGGTTAATTGTGACTGTT LITVPLQMIEFYLILAACTAIAVGVFWRLMVGTMVMLVGGYLGEAGFINATVGFVIGLAGWGYILYEIFAGEAGKVAADSAPPSVQSAFNTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACTGTGCCTCTGCAGATGATTGAGTTTTACCTCATCTTAGCTGCT---------TGT---ACAGCGATTGCAGTT---GGTGTC------------------------------------TTCTGGCGC---CTAATGGTCGGTACAATGGTAATGTTAGTTGGCGGATATTTAGGTGAG---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACAGTTGGC---TTCGTGATCGGCCTGGCCGGTTGGGGATATATCTTGTATGAGATT---------------TTT------GCT---GGTGAAGCCGGCAAGGTGGCTGCAGAT------AGC---GCACCCCCGTCCGTG---CAA---TCA---GCC---TTC---AAT---ACAATG---CGGTTAATTGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAIAV-GV------------FWR-LMVGTMVMLVGGYLGE---A------G--F-----------I----------------------NA------TVG-FVIGLAGWGYILYEI-----F--A-GEAGKVAAD--S-APPSV-Q-S-A-F-N-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927905 [IV-Proteo3-HF10_19P19] PRGD_OTU019_91e05adc034ed712dd1636644fff673a gb|KJ927905| PRGD_OTU019_91e05adc034ed712dd1636644fff673a, putative proteorhodopsin gene, partial cds. PRGD_OTU019_91e05adc034ed712dd1636644fff673a, putative proteorhodopsin gene, partial cds. KJ927905 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (33.762, 29.175), Indian Ocean (-14.48, 113.45) TTAATTACAGTGCCTCTGCAGATGATTGAGTTCTACCTCATCTTAGCTGCCTGTACTGCGATTGCAGTTGGTGTCTTCTGGCGCCTAATGATCGGTACAATGGTAATGTTAGTTGGTGGATATTTAGGTGAGGCCGGCTTTATCAATGCTACAGTTGGTTTTGTGATCGGTATGGCCGGTTGGGGATATATCTTGTATGAAATTTTTGCTGGGGAAGCTGGCAAAGTTGCTGCAGATAGCGCACCTCCGTCCGTGCAATCAGCCTTCAACACAATGCGTCTAATTGTGACTGTC LITVPLQMIEFYLILAACTAIAVGVFWRLMIGTMVMLVGGYLGEAGFINATVGFVIGMAGWGYILYEIFAGEAGKVAADSAPPSVQSAFNTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCTCTGCAGATGATTGAGTTCTACCTCATCTTAGCTGCC---------TGT---ACTGCGATTGCAGTT---GGTGTC------------------------------------TTCTGGCGC---CTAATGATCGGTACAATGGTAATGTTAGTTGGTGGATATTTAGGTGAG---------GCC------------------GGC------TTT---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACAGTTGGT---TTTGTGATCGGTATGGCCGGTTGGGGATATATCTTGTATGAAATT---------------TTT------GCT---GGGGAAGCTGGCAAAGTTGCTGCAGAT------AGC---GCACCTCCGTCCGTG---CAA---TCA---GCC---TTC---AAC---ACAATG---CGTCTAATTGTGACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAIAV-GV------------FWR-LMIGTMVMLVGGYLGE---A------G--F-----------I----------------------NA------TVG-FVIGMAGWGYILYEI-----F--A-GEAGKVAAD--S-APPSV-Q-S-A-F-N-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927921 [IV-Proteo3-HF10_19P19] PRGD_OTU019_cfcaf8fcbbcdb50b6954d5f792dcf7c8 gb|KJ927921| PRGD_OTU019_cfcaf8fcbbcdb50b6954d5f792dcf7c8, putative proteorhodopsin gene, partial cds. PRGD_OTU019_cfcaf8fcbbcdb50b6954d5f792dcf7c8, putative proteorhodopsin gene, partial cds. KJ927921 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTGCCTCTGCAGATGATTGAGTTCTACCTCATCTTAGCTGCCTGTACTGCGATTGCAGTTGGTGTCTTCTGGCGCCTGATGATCGGTACAATGGTAATGTTAGTTGGTGGATATTTAGGTGAGGCCGGCTTTATCAATGCTACAGTTGGTTTCGTGATCGGTATGGCCGGTTGGGGATATATCTTGTACGAAATTTTCGCTGGGGAAGCTGGCAAAGTTGCTGCAGATAGCGCACCTCCGTCCGTGCAATCAGCCTTCAACACAATGCGTCTAATTGTGACTGTT LITVPLQMIEFYLILAACTAIAVGVFWRLMIGTMVMLVGGYLGEAGFINATVGFVIGMAGWGYILYEIFAGEAGKVAADSAPPSVQSAFNTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCTCTGCAGATGATTGAGTTCTACCTCATCTTAGCTGCC---------TGT---ACTGCGATTGCAGTT---GGTGTC------------------------------------TTCTGGCGC---CTGATGATCGGTACAATGGTAATGTTAGTTGGTGGATATTTAGGTGAG---------GCC------------------GGC------TTT---------------------------------ATC------------------------------------------------------------------AATGCT------------------ACAGTTGGT---TTCGTGATCGGTATGGCCGGTTGGGGATATATCTTGTACGAAATT---------------TTC------GCT---GGGGAAGCTGGCAAAGTTGCTGCAGAT------AGC---GCACCTCCGTCCGTG---CAA---TCA---GCC---TTC---AAC---ACAATG---CGTCTAATTGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAIAV-GV------------FWR-LMIGTMVMLVGGYLGE---A------G--F-----------I----------------------NA------TVG-FVIGMAGWGYILYEI-----F--A-GEAGKVAAD--S-APPSV-Q-S-A-F-N-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927883 [IV-Proteo3-HF10_19P19] PRGD_OTU019_09eb5690ed514dc1632289cc5a0ec24c gb|KJ927883| PRGD_OTU019_09eb5690ed514dc1632289cc5a0ec24c, putative proteorhodopsin gene, partial cds. PRGD_OTU019_09eb5690ed514dc1632289cc5a0ec24c, putative proteorhodopsin gene, partial cds. KJ927883 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (33.762, 29.175), Indian Ocean (-14.48, 113.45) CTAATTACAGTGCCTCTGCAGATGATTGAATTCTACCTCATTCTAGCTGCCTGTACTGCAATTGCAGTGGGTGTCTTCTGGCGCCTAATGATCGGTACAATGGTAATGCTAGTTGGCGGATATTTAGGTGAGGCTGGCTTCATCAACGCTACAGTTGGATTCGTGATTGGTATGGCCGGTTGGGGATATATCTTGTATGAAATTTTTGCTGGCGAAGCCGGCAAGGTTGCTGCGGATAGTGCACCTCCATCTGTGCAATCAGCCTTTAACACTATGCGTCTGATTGTGACCGTT LITVPLQMIEFYLILAACTAIAVGVFWRLMIGTMVMLVGGYLGEAGFINATVGFVIGMAGWGYILYEIFAGEAGKVAADSAPPSVQSAFNTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTGCCTCTGCAGATGATTGAATTCTACCTCATTCTAGCTGCC---------TGT---ACTGCAATTGCAGTG---GGTGTC------------------------------------TTCTGGCGC---CTAATGATCGGTACAATGGTAATGCTAGTTGGCGGATATTTAGGTGAG---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACAGTTGGA---TTCGTGATTGGTATGGCCGGTTGGGGATATATCTTGTATGAAATT---------------TTT------GCT---GGCGAAGCCGGCAAGGTTGCTGCGGAT------AGT---GCACCTCCATCTGTG---CAA---TCA---GCC---TTT---AAC---ACTATG---CGTCTGATTGTGACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAIAV-GV------------FWR-LMIGTMVMLVGGYLGE---A------G--F-----------I----------------------NA------TVG-FVIGMAGWGYILYEI-----F--A-GEAGKVAAD--S-APPSV-Q-S-A-F-N-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927920 [IV-Proteo3-HF10_19P19] PRGD_OTU019_c8b749963712b3341ed5c656b64e9239 gb|KJ927920| PRGD_OTU019_c8b749963712b3341ed5c656b64e9239, putative proteorhodopsin gene, partial cds. PRGD_OTU019_c8b749963712b3341ed5c656b64e9239, putative proteorhodopsin gene, partial cds. KJ927920 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTAATCACAGTGCCTCTGCAGATGATTGAATTCTACCTCATCTTAGCTGCCTGTACTGCGATTGCTGTTGGTGTCTTCTGGCGCCTAATGATCGGTACAATGGTGATGTTAGTTGGCGGATATTTAGGTGAGGCTGGCTTTATCAACTCCACAGTTGGTTTCGTGATCGGTATGGCCGGTTGGGGATATATCTTGTATGAAATTTTTGCTGGTGAAGCTGGCAAAGTTGCTGCAGATAGCGCACCTCCATCCGTGCAATCAGCCTTCAACACAATGCGCCTAATTGTGACTGTT LITVPLQMIEFYLILAACTAIAVGVFWRLMIGTMVMLVGGYLGEAGFINSTVGFVIGMAGWGYILYEIFAGEAGKVAADSAPPSVQSAFNTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACAGTGCCTCTGCAGATGATTGAATTCTACCTCATCTTAGCTGCC---------TGT---ACTGCGATTGCTGTT---GGTGTC------------------------------------TTCTGGCGC---CTAATGATCGGTACAATGGTGATGTTAGTTGGCGGATATTTAGGTGAG---------GCT------------------GGC------TTT---------------------------------ATC------------------------------------------------------------------AACTCC------------------ACAGTTGGT---TTCGTGATCGGTATGGCCGGTTGGGGATATATCTTGTATGAAATT---------------TTT------GCT---GGTGAAGCTGGCAAAGTTGCTGCAGAT------AGC---GCACCTCCATCCGTG---CAA---TCA---GCC---TTC---AAC---ACAATG---CGCCTAATTGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAIAV-GV------------FWR-LMIGTMVMLVGGYLGE---A------G--F-----------I----------------------NS------TVG-FVIGMAGWGYILYEI-----F--A-GEAGKVAAD--S-APPSV-Q-S-A-F-N-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927907 [IV-Proteo3-HF10_19P19] PRGD_OTU019_97210a7ba7aa5e109568c13f828a841c gb|KJ927907| PRGD_OTU019_97210a7ba7aa5e109568c13f828a841c, putative proteorhodopsin gene, partial cds. PRGD_OTU019_97210a7ba7aa5e109568c13f828a841c, putative proteorhodopsin gene, partial cds. KJ927907 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTAATTACAGTGCCGCTGCAAATGATTGAATTCTACCTTATCCTAGCCGCCTGCACTGCGATTGCGGTTGGTGTCTTCTGGCGCCTAATGATCGGCACGATGGTAATGTTGGTTGGCGGATATCTGGGTGAGGCTGGCTTCATCAACGCTACTGTTGGTTTTGTGATCGGTATGGCCGGTTGGGGATATATTTTGTATGAAATCTTTGCTGGAGAAGCTGGCAAGGTTGCTGCAGATAGCGCACCACCCTCCGTGCAATCAGCCTTCAACACAATGCGTCTAATTGTGACTGTT LITVPLQMIEFYLILAACTAIAVGVFWRLMIGTMVMLVGGYLGEAGFINATVGFVIGMAGWGYILYEIFAGEAGKVAADSAPPSVQSAFNTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTGCCGCTGCAAATGATTGAATTCTACCTTATCCTAGCCGCC---------TGC---ACTGCGATTGCGGTT---GGTGTC------------------------------------TTCTGGCGC---CTAATGATCGGCACGATGGTAATGTTGGTTGGCGGATATCTGGGTGAG---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACTGTTGGT---TTTGTGATCGGTATGGCCGGTTGGGGATATATTTTGTATGAAATC---------------TTT------GCT---GGAGAAGCTGGCAAGGTTGCTGCAGAT------AGC---GCACCACCCTCCGTG---CAA---TCA---GCC---TTC---AAC---ACAATG---CGTCTAATTGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAIAV-GV------------FWR-LMIGTMVMLVGGYLGE---A------G--F-----------I----------------------NA------TVG-FVIGMAGWGYILYEI-----F--A-GEAGKVAAD--S-APPSV-Q-S-A-F-N-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927909 [IV-Proteo3-HF10_19P19] PRGD_OTU019_9fd189a5636d2b766ff8b360dac7fe49 gb|KJ927909| PRGD_OTU019_9fd189a5636d2b766ff8b360dac7fe49, putative proteorhodopsin gene, partial cds. PRGD_OTU019_9fd189a5636d2b766ff8b360dac7fe49, putative proteorhodopsin gene, partial cds. KJ927909 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCATAACAGTGCCTCTACAAATGATTGAATTCTACCTCATCCTTGCTGCCTGCACTGCAATTGCAGTTGGCGTATTCTGGCGCCTGATGGTTGGCACAATGGTTATGCTGGTTGGAGGCTATCTAGGTGAAGCCGGCTTCATCAACGCTACGGTTGGTTTTGTAATCGGCATGGCCGGTTGGGGATATATTCTGTATGAAATCTTTGCTGGTGAAGCTGGTAAAGTTGCTGCAGATAGTGCGCCCCCTTCCGTGCAATCGGCGTTCAACACAATGCGCTTGATTGTGACTGTA LITVPLQMIEFYLILAACTAIAVGVFWRLMVGTMVMLVGGYLGEAGFINATVGFVIGMAGWGYILYEIFAGEAGKVAADSAPPSVQSAFNTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATAACAGTGCCTCTACAAATGATTGAATTCTACCTCATCCTTGCTGCC---------TGC---ACTGCAATTGCAGTT---GGCGTA------------------------------------TTCTGGCGC---CTGATGGTTGGCACAATGGTTATGCTGGTTGGAGGCTATCTAGGTGAA---------GCC------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACGGTTGGT---TTTGTAATCGGCATGGCCGGTTGGGGATATATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGTAAAGTTGCTGCAGAT------AGT---GCGCCCCCTTCCGTG---CAA---TCG---GCG---TTC---AAC---ACAATG---CGCTTGATTGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAIAV-GV------------FWR-LMVGTMVMLVGGYLGE---A------G--F-----------I----------------------NA------TVG-FVIGMAGWGYILYEI-----F--A-GEAGKVAAD--S-APPSV-Q-S-A-F-N-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927919 [IV-Proteo3-HF10_19P19] PRGD_OTU019_c8740cdc3d24887723526b6a7fd5e225 gb|KJ927919| PRGD_OTU019_c8740cdc3d24887723526b6a7fd5e225, putative proteorhodopsin gene, partial cds. PRGD_OTU019_c8740cdc3d24887723526b6a7fd5e225, putative proteorhodopsin gene, partial cds. KJ927919 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) CTCATAACAGTGCCTCTACAAATGATTGAATTCTACCTCATCCTTGCTGCCTGCACTGCAATTGCAGTCGGCGTATTCTGGCGCCTGATGGTTGGCACAATGGTTATGCTGGTTGGAGGCTATCTAGGTGAAGCCGGCTTCATCAACGCTACGGTTGGTTTTGTAATCGGCATGGCCGGTTGGGGATATATTCTGTATGAAATCTTTGCTGGTGAAGCTGGTAAAGTTGCTGCAGATAGTGCGCCCCCCTCCGTGCAATCGGCGTTCAACACAATGCGCTTGATTGTGACTGTG LITVPLQMIEFYLILAACTAIAVGVFWRLMVGTMVMLVGGYLGEAGFINATVGFVIGMAGWGYILYEIFAGEAGKVAADSAPPSVQSAFNTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATAACAGTGCCTCTACAAATGATTGAATTCTACCTCATCCTTGCTGCC---------TGC---ACTGCAATTGCAGTC---GGCGTA------------------------------------TTCTGGCGC---CTGATGGTTGGCACAATGGTTATGCTGGTTGGAGGCTATCTAGGTGAA---------GCC------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACGGTTGGT---TTTGTAATCGGCATGGCCGGTTGGGGATATATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGTAAAGTTGCTGCAGAT------AGT---GCGCCCCCCTCCGTG---CAA---TCG---GCG---TTC---AAC---ACAATG---CGCTTGATTGTGACTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAIAV-GV------------FWR-LMVGTMVMLVGGYLGE---A------G--F-----------I----------------------NA------TVG-FVIGMAGWGYILYEI-----F--A-GEAGKVAAD--S-APPSV-Q-S-A-F-N-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927895 [IV-Proteo3-HF10_19P19] PRGD_OTU019_3fc461d949cb64e614ffaf24fa3fa8c5 gb|KJ927895| PRGD_OTU019_3fc461d949cb64e614ffaf24fa3fa8c5, putative proteorhodopsin gene, partial cds. PRGD_OTU019_3fc461d949cb64e614ffaf24fa3fa8c5, putative proteorhodopsin gene, partial cds. KJ927895 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATCACAGTGCCTCTGCAGATGATCGAATTCTACCTGATCCTGGCAGCTTGCACAGCGATCGCTGTTGGCGTCTTCTGGCGTCTGATGATCGGTACCATGGTCATGCTGGTCGGTGGTTATTTAGGTGAAGCTGGCTTCATCAACGCTACCGTTGGTTTTGTCATTGGTATGGCTGGTTGGGGTTACATTCTGTATGAGATCTTTGCTGGTGAAGCCGGTAAAGTTGCTGCAGACAGCGCCCCTGCATCTGTTCAGTCAGCTTTCAACACAATGCGTCTAATCGTGACGATC LITVPLQMIEFYLILAACTAIAVGVFWRLMIGTMVMLVGGYLGEAGFINATVGFVIGMAGWGYILYEIFAGEAGKVAADSAPASVQSAFNTMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTGCCTCTGCAGATGATCGAATTCTACCTGATCCTGGCAGCT---------TGC---ACAGCGATCGCTGTT---GGCGTC------------------------------------TTCTGGCGT---CTGATGATCGGTACCATGGTCATGCTGGTCGGTGGTTATTTAGGTGAA---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCT------------------ACCGTTGGT---TTTGTCATTGGTATGGCTGGTTGGGGTTACATTCTGTATGAGATC---------------TTT------GCT---GGTGAAGCCGGTAAAGTTGCTGCAGAC------AGC---GCCCCTGCATCTGTT---CAG---TCA---GCT---TTC---AAC---ACAATG---CGTCTAATCGTGACGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAIAV-GV------------FWR-LMIGTMVMLVGGYLGE---A------G--F-----------I----------------------NA------TVG-FVIGMAGWGYILYEI-----F--A-GEAGKVAAD--S-APASV-Q-S-A-F-N-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927893 [IV-Proteo3-HF10_19P19] PRGD_OTU019_39b3e05566c264a643e928879f0320c3 gb|KJ927893| PRGD_OTU019_39b3e05566c264a643e928879f0320c3, putative proteorhodopsin gene, partial cds. PRGD_OTU019_39b3e05566c264a643e928879f0320c3, putative proteorhodopsin gene, partial cds. KJ927893 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175) TTGATTACAGTTCCACTCCAAATGATTGAATTTTATCTAATCCTTGCTGCATGTACTGCTGTAGCGATTGGAGTATTCTGGAGGCTGCTAGTCGGCACCATGGTAATGTTGATTGGTGGGTATCTTGGCGAAGCCGGTTTCATAAACGCTACTGTCGGATTTGTTATCGGTATGGCCGGTTGGGCGTACATTCTTTATGAAATCTTTGCTGGTGAAGCTGGTAAAGTTGCCGCTGGAGAAGCGCCAGCATCAGTTCAATCATCATTCAACACAATGCGTTGGATTGTAACTATC LITVPLQMIEFYLILAACTAVAIGVFWRLLVGTMVMLIGGYLGEAGFINATVGFVIGMAGWAYILYEIFAGEAGKVAAGEAPASVQSSFNTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACAGTTCCACTCCAAATGATTGAATTTTATCTAATCCTTGCTGCA---------TGT---ACTGCTGTAGCGATT---GGAGTA------------------------------------TTCTGGAGG---CTGCTAGTCGGCACCATGGTAATGTTGATTGGTGGGTATCTTGGCGAA---------GCC------------------GGT------TTC---------------------------------ATA------------------------------------------------------------------AACGCT------------------ACTGTCGGA---TTTGTTATCGGTATGGCCGGTTGGGCGTACATTCTTTATGAAATC---------------TTT------GCT---GGTGAAGCTGGTAAAGTTGCCGCTGGA------GAA---GCGCCAGCATCAGTT---CAA---TCA---TCA---TTC---AAC---ACAATG---CGTTGGATTGTAACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAVAI-GV------------FWR-LLVGTMVMLIGGYLGE---A------G--F-----------I----------------------NA------TVG-FVIGMAGWAYILYEI-----F--A-GEAGKVAAG--E-APASV-Q-S-S-F-N-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927916 [IV-Proteo3-HF10_19P19] PRGD_OTU019_c0fe97cfd070747160d885558d65a04c gb|KJ927916| PRGD_OTU019_c0fe97cfd070747160d885558d65a04c, putative proteorhodopsin gene, partial cds. PRGD_OTU019_c0fe97cfd070747160d885558d65a04c, putative proteorhodopsin gene, partial cds. KJ927916 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.935 18.508 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (33.762, 29.175; 33.935, 18.508), Indian Ocean (-23.5956, 69.0419) TTGATTACAGTTCCACTCCAAATGATTGAATTTTATCTAATCCTCGCTGCGTGTACTGCTGTAGCGATTGGAGTATTCTGGAGGCTGCTAGTCGGAACCATGGTAATGTTGATCGGTGGGTATCTTGGCGAAGCCGGTTTCATAAACGCTACTGTCGGATTTGTTATCGGTATGGCCGGTTGGGCGTACATTCTGTATGAGATCTTTGCTGGTGAAGCTGGTAAAGTTGCTGCTGGAGAAGCTCCAGCATCAGTTCAATCATCATTCAATACAATGCGTTGGATTGTAACTATC LITVPLQMIEFYLILAACTAVAIGVFWRLLVGTMVMLIGGYLGEAGFINATVGFVIGMAGWAYILYEIFAGEAGKVAAGEAPASVQSSFNTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACAGTTCCACTCCAAATGATTGAATTTTATCTAATCCTCGCTGCG---------TGT---ACTGCTGTAGCGATT---GGAGTA------------------------------------TTCTGGAGG---CTGCTAGTCGGAACCATGGTAATGTTGATCGGTGGGTATCTTGGCGAA---------GCC------------------GGT------TTC---------------------------------ATA------------------------------------------------------------------AACGCT------------------ACTGTCGGA---TTTGTTATCGGTATGGCCGGTTGGGCGTACATTCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTGGTAAAGTTGCTGCTGGA------GAA---GCTCCAGCATCAGTT---CAA---TCA---TCA---TTC---AAT---ACAATG---CGTTGGATTGTAACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAVAI-GV------------FWR-LLVGTMVMLIGGYLGE---A------G--F-----------I----------------------NA------TVG-FVIGMAGWAYILYEI-----F--A-GEAGKVAAG--E-APASV-Q-S-S-F-N-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927885 [IV-Proteo3-HF10_19P19] PRGD_OTU019_0c9f022d667f9a72136721ef9f58a3af gb|KJ927885| PRGD_OTU019_0c9f022d667f9a72136721ef9f58a3af, putative proteorhodopsin gene, partial cds. PRGD_OTU019_0c9f022d667f9a72136721ef9f58a3af, putative proteorhodopsin gene, partial cds. KJ927885 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATTACAGTTCCACTCCAAATGATTGAATTTTATCTAATCCTCGCTGCATGTACTGCTGTAGCGATTGGAGTATTCTGGAGACTGCTAGTCGGTACCATGGTAATGTTGATCGGTGGGTATCTTGGCGAAGCTGGATTCATAAACGCTACTGTCGGCTTTGTTATCGGTATGGCCGGTTGGGCGTATATTCTTTATGAAATCTTTGCCGGTGAAGCCGGTAAAGTTGCAGCTGGAGAAGCTCCCGCATCAGTTCAATCATCGTTCAACACAATGCGTTGGATTGTAACTATC LITVPLQMIEFYLILAACTAVAIGVFWRLLVGTMVMLIGGYLGEAGFINATVGFVIGMAGWAYILYEIFAGEAGKVAAGEAPASVQSSFNTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACAGTTCCACTCCAAATGATTGAATTTTATCTAATCCTCGCTGCA---------TGT---ACTGCTGTAGCGATT---GGAGTA------------------------------------TTCTGGAGA---CTGCTAGTCGGTACCATGGTAATGTTGATCGGTGGGTATCTTGGCGAA---------GCT------------------GGA------TTC---------------------------------ATA------------------------------------------------------------------AACGCT------------------ACTGTCGGC---TTTGTTATCGGTATGGCCGGTTGGGCGTATATTCTTTATGAAATC---------------TTT------GCC---GGTGAAGCCGGTAAAGTTGCAGCTGGA------GAA---GCTCCCGCATCAGTT---CAA---TCA---TCG---TTC---AAC---ACAATG---CGTTGGATTGTAACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAVAI-GV------------FWR-LLVGTMVMLIGGYLGE---A------G--F-----------I----------------------NA------TVG-FVIGMAGWAYILYEI-----F--A-GEAGKVAAG--E-APASV-Q-S-S-F-N-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927901 [IV-Proteo3-HF10_19P19] PRGD_OTU019_8700803393169f238a775d4230a41289 gb|KJ927901| PRGD_OTU019_8700803393169f238a775d4230a41289, putative proteorhodopsin gene, partial cds. PRGD_OTU019_8700803393169f238a775d4230a41289, putative proteorhodopsin gene, partial cds. KJ927901 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), Mediterranean Sea (33.762, 29.175) CTAATCACCGTTCCACTTCAGATGATTGAATTCTACCTAATCTTGGCTGCGTGCACAGCGGTTGCGATGGGGGTGTTCTGGAGACTTTTAGTTGGAACTATAATTATGTTAGTTGGCGGATATCTGGGGGAAGCAGGGTTCATCAACGCCACACTTGGTTTCGTCATCGGCATGGCTGGTTGGGCATACATTCTGTATGAAATCTTTGTGGGTGAAGCCGGAAAGGTTGCTGCAGATGAGGCACCAGATTCTGTAAAGTCTGCGTTTAGCATGATGCGCTGGATTGTAACGATC LITVPLQMIEFYLILAACTAVAMGVFWRLLVGTIIMLVGGYLGEAGFINATLGFVIGMAGWAYILYEIFVGEAGKVAADEAPDSVKSAFSMMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACCGTTCCACTTCAGATGATTGAATTCTACCTAATCTTGGCTGCG---------TGC---ACAGCGGTTGCGATG---GGGGTG------------------------------------TTCTGGAGA---CTTTTAGTTGGAACTATAATTATGTTAGTTGGCGGATATCTGGGGGAA---------GCA------------------GGG------TTC---------------------------------ATC------------------------------------------------------------------AACGCC------------------ACACTTGGT---TTCGTCATCGGCATGGCTGGTTGGGCATACATTCTGTATGAAATC---------------TTT------GTG---GGTGAAGCCGGAAAGGTTGCTGCAGAT------GAG---GCACCAGATTCTGTA---AAG---TCT---GCG---TTT---AGC---ATGATG---CGCTGGATTGTAACGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAVAM-GV------------FWR-LLVGTIIMLVGGYLGE---A------G--F-----------I----------------------NA------TLG-FVIGMAGWAYILYEI-----F--V-GEAGKVAAD--E-APDSV-K-S-A-F-S-MM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927882 [IV-Proteo3-HF10_19P19] PRGD_OTU019_otuREP_bff3a9cec49cbb00e369e3c8426b698b gb|KJ927882| PRGD_OTU019_otuREP_bff3a9cec49cbb00e369e3c8426b698b, putative proteorhodopsin gene, partial cds. PRGD_OTU019_otuREP_bff3a9cec49cbb00e369e3c8426b698b, putative proteorhodopsin gene, partial cds. KJ927882 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) CTAATCACCGTTCCACTTCAGATGATTGAATTCTACCTAATCTTGGCTGCGTGCACAGCGGTTGCGATGGGTGTTTTCTGGAGACTTTTAGTTGGAACTATAATTATGTTAGTTGGCGGATATCTGGGGGAAGCAGGCTTCATCAACGCCACACTCGGTTTCGTCATCGGCATGGCTGGTTGGGCATACATTCTGTATGAAATTTTTGCAGGTGAAGCCGGAAAGGTTGCTGCAGATGAGGCACCAGATTCTGTAAAGTCTGCGTTTAGCATGATGCGCTGGATTGTGACGATC LITVPLQMIEFYLILAACTAVAMGVFWRLLVGTIIMLVGGYLGEAGFINATLGFVIGMAGWAYILYEIFAGEAGKVAADEAPDSVKSAFSMMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACCGTTCCACTTCAGATGATTGAATTCTACCTAATCTTGGCTGCG---------TGC---ACAGCGGTTGCGATG---GGTGTT------------------------------------TTCTGGAGA---CTTTTAGTTGGAACTATAATTATGTTAGTTGGCGGATATCTGGGGGAA---------GCA------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCC------------------ACACTCGGT---TTCGTCATCGGCATGGCTGGTTGGGCATACATTCTGTATGAAATT---------------TTT------GCA---GGTGAAGCCGGAAAGGTTGCTGCAGAT------GAG---GCACCAGATTCTGTA---AAG---TCT---GCG---TTT---AGC---ATGATG---CGCTGGATTGTGACGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAVAM-GV------------FWR-LLVGTIIMLVGGYLGE---A------G--F-----------I----------------------NA------TLG-FVIGMAGWAYILYEI-----F--A-GEAGKVAAD--E-APDSV-K-S-A-F-S-MM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927917 [IV-Proteo3-HF10_19P19] PRGD_OTU019_c61acb31dfce1b40e66de174e0334b6f gb|KJ927917| PRGD_OTU019_c61acb31dfce1b40e66de174e0334b6f, putative proteorhodopsin gene, partial cds. PRGD_OTU019_c61acb31dfce1b40e66de174e0334b6f, putative proteorhodopsin gene, partial cds. KJ927917 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508) CTAATCACCGTTCCACTTCAGATGATTGAATTCTACCTAATCTTGGCTGCGTGCACAGCGGTTGCGATGGGTGTTTTCTGGAGACTTTTAGTTGGAACTATAATTATGTTAGTTGGCGGATATCTGGGGGAAGCAGGCTTCATCAACGCCACACTCGGTTTCGTCATCGGCATGGCTGGTTGGGCATACATCTTGTATGAAATTTTTGCAGGTGAAGCCGGAAAGGTTGCTGCAGATGAGGCACCAGATTCTGTAAAGTCTGCGTTTAGCATGATGCGCTGGATTGTGACGATC LITVPLQMIEFYLILAACTAVAMGVFWRLLVGTIIMLVGGYLGEAGFINATLGFVIGMAGWAYILYEIFAGEAGKVAADEAPDSVKSAFSMMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACCGTTCCACTTCAGATGATTGAATTCTACCTAATCTTGGCTGCG---------TGC---ACAGCGGTTGCGATG---GGTGTT------------------------------------TTCTGGAGA---CTTTTAGTTGGAACTATAATTATGTTAGTTGGCGGATATCTGGGGGAA---------GCA------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACGCC------------------ACACTCGGT---TTCGTCATCGGCATGGCTGGTTGGGCATACATCTTGTATGAAATT---------------TTT------GCA---GGTGAAGCCGGAAAGGTTGCTGCAGAT------GAG---GCACCAGATTCTGTA---AAG---TCT---GCG---TTT---AGC---ATGATG---CGCTGGATTGTGACGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAVAM-GV------------FWR-LLVGTIIMLVGGYLGE---A------G--F-----------I----------------------NA------TLG-FVIGMAGWAYILYEI-----F--A-GEAGKVAAD--E-APDSV-K-S-A-F-S-MM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927910 [IV-Proteo3-HF10_19P19] PRGD_OTU019_a284bb3b348f12bd36c2c6b897050e51 gb|KJ927910| PRGD_OTU019_a284bb3b348f12bd36c2c6b897050e51, putative proteorhodopsin gene, partial cds. PRGD_OTU019_a284bb3b348f12bd36c2c6b897050e51, putative proteorhodopsin gene, partial cds. KJ927910 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175) CTAATAACCGTTCCACTTCAGATGATTGAATTCTACCTAATCTTGGCTGCGTGCACAGCAGTTGCGATGGGTGTATTCTGGAGACTTTTAGTTGGAACTACAATTATGTTAGTTGGCGGATATCTGGGGGAAGCAGGCTTCATCAACACCACACTCGGTTTCGTCATTGGCATGGCTGGTTGGGCATACATTTTGTATGAAATTTTTGCAGGTGAAGCAGGAAAGGTTGCTGCAGACGAGGCACCAGATTCTGTAAAGTCTGCGTTTAGCATGATGCGTTGGATTGTGACGATC LITVPLQMIEFYLILAACTAVAMGVFWRLLVGTTIMLVGGYLGEAGFINTTLGFVIGMAGWAYILYEIFAGEAGKVAADEAPDSVKSAFSMMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATAACCGTTCCACTTCAGATGATTGAATTCTACCTAATCTTGGCTGCG---------TGC---ACAGCAGTTGCGATG---GGTGTA------------------------------------TTCTGGAGA---CTTTTAGTTGGAACTACAATTATGTTAGTTGGCGGATATCTGGGGGAA---------GCA------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AACACC------------------ACACTCGGT---TTCGTCATTGGCATGGCTGGTTGGGCATACATTTTGTATGAAATT---------------TTT------GCA---GGTGAAGCAGGAAAGGTTGCTGCAGAC------GAG---GCACCAGATTCTGTA---AAG---TCT---GCG---TTT---AGC---ATGATG---CGTTGGATTGTGACGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAVAM-GV------------FWR-LLVGTTIMLVGGYLGE---A------G--F-----------I----------------------NT------TLG-FVIGMAGWAYILYEI-----F--A-GEAGKVAAD--E-APDSV-K-S-A-F-S-MM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927889 [IV-Proteo3-HF10_19P19] PRGD_OTU019_1f1bfe98f08c4a339d014c2bd5b8fbef gb|KJ927889| PRGD_OTU019_1f1bfe98f08c4a339d014c2bd5b8fbef, putative proteorhodopsin gene, partial cds. PRGD_OTU019_1f1bfe98f08c4a339d014c2bd5b8fbef, putative proteorhodopsin gene, partial cds. KJ927889 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTAATCACTGTTCCACTTCAGATGATTGAATTCTATTTGATCTTGGCTGCGTGCACTGCAGTTGCGATGGGTGTATTCTGGAGACTTTTAGTCGGAACTGTAATTATGCTTCTTGGCGGCTATCTCGGAGAAGCTGGATTCATTAACGCTACACTCGCGTTCGTTATTGGCATGGCTGGATGGGCGTACATCTTATATGAGATCTTTGCAGGAGAAGCTGGAAAGGTTGCTGCAGATGAGGCCCCAGATTCGGTTAAGTCTGCATTTAGCATGATGCGATGGATTGTCACAATT LITVPLQMIEFYLILAACTAVAMGVFWRLLVGTVIMLLGGYLGEAGFINATLAFVIGMAGWAYILYEIFAGEAGKVAADEAPDSVKSAFSMMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACTGTTCCACTTCAGATGATTGAATTCTATTTGATCTTGGCTGCG---------TGC---ACTGCAGTTGCGATG---GGTGTA------------------------------------TTCTGGAGA---CTTTTAGTCGGAACTGTAATTATGCTTCTTGGCGGCTATCTCGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTCGCG---TTCGTTATTGGCATGGCTGGATGGGCGTACATCTTATATGAGATC---------------TTT------GCA---GGAGAAGCTGGAAAGGTTGCTGCAGAT------GAG---GCCCCAGATTCGGTT---AAG---TCT---GCA---TTT---AGC---ATGATG---CGATGGATTGTCACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAVAM-GV------------FWR-LLVGTVIMLLGGYLGE---A------G--F-----------I----------------------NA------TLA-FVIGMAGWAYILYEI-----F--A-GEAGKVAAD--E-APDSV-K-S-A-F-S-MM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927911 [IV-Proteo3-HF10_19P19] PRGD_OTU019_a31aeff32ed74e0a858006c0b871b89b gb|KJ927911| PRGD_OTU019_a31aeff32ed74e0a858006c0b871b89b, putative proteorhodopsin gene, partial cds. PRGD_OTU019_a31aeff32ed74e0a858006c0b871b89b, putative proteorhodopsin gene, partial cds. KJ927911 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) CTAATCACTGTTCCACTTCAGATGATTGAATTCTATTTGATCTTGGCTGCGTGCACTGCAGTTGCGATGGGTGTATTCTGGAGACTTTTAGTTGGAACTGTAATTATGCTTCTTGGCGGGTATCTCGGAGAAGCTGGATTCATTAACGCTACACTCGCGTTCGTTATTGGCATGGCTGGATGGGCGTACATCTTATATGAAATCTTTGCAGGAGAAGCTGGAAAGGTTGCTGCAGATGAGGCCCCAGATTCGGTTAAGTCTGCATTTAGCATGATGCGATGGATTGTCACAATT LITVPLQMIEFYLILAACTAVAMGVFWRLLVGTVIMLLGGYLGEAGFINATLAFVIGMAGWAYILYEIFAGEAGKVAADEAPDSVKSAFSMMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACTGTTCCACTTCAGATGATTGAATTCTATTTGATCTTGGCTGCG---------TGC---ACTGCAGTTGCGATG---GGTGTA------------------------------------TTCTGGAGA---CTTTTAGTTGGAACTGTAATTATGCTTCTTGGCGGGTATCTCGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTCGCG---TTCGTTATTGGCATGGCTGGATGGGCGTACATCTTATATGAAATC---------------TTT------GCA---GGAGAAGCTGGAAAGGTTGCTGCAGAT------GAG---GCCCCAGATTCGGTT---AAG---TCT---GCA---TTT---AGC---ATGATG---CGATGGATTGTCACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAVAM-GV------------FWR-LLVGTVIMLLGGYLGE---A------G--F-----------I----------------------NA------TLA-FVIGMAGWAYILYEI-----F--A-GEAGKVAAD--E-APDSV-K-S-A-F-S-MM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927922 [IV-Proteo3-HF10_19P19] PRGD_OTU019_d2803907efb9990a126f48b4fc719220 gb|KJ927922| PRGD_OTU019_d2803907efb9990a126f48b4fc719220, putative proteorhodopsin gene, partial cds. PRGD_OTU019_d2803907efb9990a126f48b4fc719220, putative proteorhodopsin gene, partial cds. KJ927922 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATCACTGTTCCACTTCAGATGATTGAATTCTATTTGATCTTGGCTGCGTGCACTGCAGTTGCGATGGGTGTATTCTGGAGACTTTTAGTCGGAACTGTAATTATGCTTCTTGGCGGCTATCTCGGAGAAGCTGGATTCATTAACGCTACACTCGGGTTCGTTATTGGCATGGCTGGATGGGCGTACATCTTATATGAAATCTTTGCAGGAGAAGCTGGAAAGGTTGCTGCAGATGAGGCTCCAGATTCGGTTAAGTCTGCATTTAGCATGATGCGTTGGATTGTCACAATT LITVPLQMIEFYLILAACTAVAMGVFWRLLVGTVIMLLGGYLGEAGFINATLGFVIGMAGWAYILYEIFAGEAGKVAADEAPDSVKSAFSMMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACTGTTCCACTTCAGATGATTGAATTCTATTTGATCTTGGCTGCG---------TGC---ACTGCAGTTGCGATG---GGTGTA------------------------------------TTCTGGAGA---CTTTTAGTCGGAACTGTAATTATGCTTCTTGGCGGCTATCTCGGAGAA---------GCT------------------GGA------TTC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACACTCGGG---TTCGTTATTGGCATGGCTGGATGGGCGTACATCTTATATGAAATC---------------TTT------GCA---GGAGAAGCTGGAAAGGTTGCTGCAGAT------GAG---GCTCCAGATTCGGTT---AAG---TCT---GCA---TTT---AGC---ATGATG---CGTTGGATTGTCACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAVAM-GV------------FWR-LLVGTVIMLLGGYLGE---A------G--F-----------I----------------------NA------TLG-FVIGMAGWAYILYEI-----F--A-GEAGKVAAD--E-APDSV-K-S-A-F-S-MM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927900 [IV-Proteo3-HF10_19P19] PRGD_OTU019_68d9fa8f893370030b04df969e32ddc3 gb|KJ927900| PRGD_OTU019_68d9fa8f893370030b04df969e32ddc3, putative proteorhodopsin gene, partial cds. PRGD_OTU019_68d9fa8f893370030b04df969e32ddc3, putative proteorhodopsin gene, partial cds. KJ927900 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45; -33.28, 45.35) CTAATCACTGTTCCACTTCAGATGATTGAATTCTATTTAATCTTAGCTGCGTGCACTGCAGTTGCGATGGGTGTATTCTGGAGACTTTTAGTCGGAACTGTAATTATGCTTCTTGGCGGTTATCTCGGAGAAGCAGGCTTCATTAACGCTACGCTCGGGTTCGTTATTGGCTTGGCTGGATGGGCGTACATCTTATATGAAATCTTTGCAGGAGAAGCTGGAAAGGTTGCTGCAGATGAGGCTCCAGATTCGGTTAAGTCTGCATTTAGCATGATGCGATGGATTGTCACAATT LITVPLQMIEFYLILAACTAVAMGVFWRLLVGTVIMLLGGYLGEAGFINATLGFVIGLAGWAYILYEIFAGEAGKVAADEAPDSVKSAFSMMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACTGTTCCACTTCAGATGATTGAATTCTATTTAATCTTAGCTGCG---------TGC---ACTGCAGTTGCGATG---GGTGTA------------------------------------TTCTGGAGA---CTTTTAGTCGGAACTGTAATTATGCTTCTTGGCGGTTATCTCGGAGAA---------GCA------------------GGC------TTC---------------------------------ATT------------------------------------------------------------------AACGCT------------------ACGCTCGGG---TTCGTTATTGGCTTGGCTGGATGGGCGTACATCTTATATGAAATC---------------TTT------GCA---GGAGAAGCTGGAAAGGTTGCTGCAGAT------GAG---GCTCCAGATTCGGTT---AAG---TCT---GCA---TTT---AGC---ATGATG---CGATGGATTGTCACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAVAM-GV------------FWR-LLVGTVIMLLGGYLGE---A------G--F-----------I----------------------NA------TLG-FVIGLAGWAYILYEI-----F--A-GEAGKVAAD--E-APDSV-K-S-A-F-S-MM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927906 [IV-Proteo3-HF10_19P19] PRGD_OTU019_92ce6982da88c34e15c966a822622a1e gb|KJ927906| PRGD_OTU019_92ce6982da88c34e15c966a822622a1e, putative proteorhodopsin gene, partial cds. PRGD_OTU019_92ce6982da88c34e15c966a822622a1e, putative proteorhodopsin gene, partial cds. KJ927906 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTGATCACTGTACCACTTCAGATGATCGAATTCTACTTAATCCTAGCAGCATGTACTGCAGTCGCCCTTGGGGTTTTCTGGAGACTTTTGATAGGCACCATGGTTATGCTTGTCGGAGGATATCTAGGCGAAGCAGGGTTCATTAATGCTACACTTGGTTTCGTCATTGGATTAGCTGGATGGGCATACATTCTGTACGAGATATTTGCCGGTGAAGCTGGAAAGGTCGCTGCAGATGAAGCACCTGAGTCAGTTAAGTCAGCATTTAGTTTAATGCGTTGGATTGTGACAATT LITVPLQMIEFYLILAACTAVALGVFWRLLIGTMVMLVGGYLGEAGFINATLGFVIGLAGWAYILYEIFAGEAGKVAADEAPESVKSAFSLMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTACCACTTCAGATGATCGAATTCTACTTAATCCTAGCAGCA---------TGT---ACTGCAGTCGCCCTT---GGGGTT------------------------------------TTCTGGAGA---CTTTTGATAGGCACCATGGTTATGCTTGTCGGAGGATATCTAGGCGAA---------GCA------------------GGG------TTC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCGTCATTGGATTAGCTGGATGGGCATACATTCTGTACGAGATA---------------TTT------GCC---GGTGAAGCTGGAAAGGTCGCTGCAGAT------GAA---GCACCTGAGTCAGTT---AAG---TCA---GCA---TTT---AGT---TTAATG---CGTTGGATTGTGACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAVAL-GV------------FWR-LLIGTMVMLVGGYLGE---A------G--F-----------I----------------------NA------TLG-FVIGLAGWAYILYEI-----F--A-GEAGKVAAD--E-APESV-K-S-A-F-S-LM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927915 [IV-Proteo3-HF10_19P19] PRGD_OTU019_ba970374a42aca6f47e71403278ecf95 gb|KJ927915| PRGD_OTU019_ba970374a42aca6f47e71403278ecf95, putative proteorhodopsin gene, partial cds. PRGD_OTU019_ba970374a42aca6f47e71403278ecf95, putative proteorhodopsin gene, partial cds. KJ927915 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175; 33.935, 18.508), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACTGTACCACTTCAGATGATCGAATTCTACTTAATCCTAGCAGCATGTACTGCGGTCGCCCTTGGGGTTTTCTGGAGACTTTTGATAGGCACCATGGTTATGCTTGTCGGAGGATATCTAGGCGAAGCAGGGTTCATTAATGCTACACTTGGTTTCGTCATTGGATTGGCTGGATGGGCATACATTCTGTACGAAATATTTGCAGGTGAAGCTGGAAAGGTCGCTGCTGATGAAGCACCTGAGTCGGTTAAGTCAGCATTTAGCTTAATGCGTTGGATTGTGACAATT LITVPLQMIEFYLILAACTAVALGVFWRLLIGTMVMLVGGYLGEAGFINATLGFVIGLAGWAYILYEIFAGEAGKVAADEAPESVKSAFSLMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTACCACTTCAGATGATCGAATTCTACTTAATCCTAGCAGCA---------TGT---ACTGCGGTCGCCCTT---GGGGTT------------------------------------TTCTGGAGA---CTTTTGATAGGCACCATGGTTATGCTTGTCGGAGGATATCTAGGCGAA---------GCA------------------GGG------TTC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACACTTGGT---TTCGTCATTGGATTGGCTGGATGGGCATACATTCTGTACGAAATA---------------TTT------GCA---GGTGAAGCTGGAAAGGTCGCTGCTGAT------GAA---GCACCTGAGTCGGTT---AAG---TCA---GCA---TTT---AGC---TTAATG---CGTTGGATTGTGACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAVAL-GV------------FWR-LLIGTMVMLVGGYLGE---A------G--F-----------I----------------------NA------TLG-FVIGLAGWAYILYEI-----F--A-GEAGKVAAD--E-APESV-K-S-A-F-S-LM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927898 [IV-Proteo3-HF10_19P19] PRGD_OTU019_5f0cb66c910cf116522dface45a7108e gb|KJ927898| PRGD_OTU019_5f0cb66c910cf116522dface45a7108e, putative proteorhodopsin gene, partial cds. PRGD_OTU019_5f0cb66c910cf116522dface45a7108e, putative proteorhodopsin gene, partial cds. KJ927898 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-14.48, 113.45) TTGATCACTGTACCACTTCAGATGATCGAATTCTACTTAATCCTAGCAGCATGTACTGCAGTGGCCCTTGGGGTTTTCTGGAGACTTTTGATAGGCACCATGGTTATGCTTATCGGAGGATATCTAGGTGAAGCAGGGTTCATTAATGCTACGCTTGGTTTCGTTATTGGATTGGCTGGATGGGCATACATTCTGTATGAGATATTTGCAGGTGAAGCTGGAAAGGTCGCTGCAGATGAAGCACCTGAGTCAGTTAAGTCGGCATTTAGCTTAATGCGTTGGATTGTAACAATT LITVPLQMIEFYLILAACTAVALGVFWRLLIGTMVMLIGGYLGEAGFINATLGFVIGLAGWAYILYEIFAGEAGKVAADEAPESVKSAFSLMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTACCACTTCAGATGATCGAATTCTACTTAATCCTAGCAGCA---------TGT---ACTGCAGTGGCCCTT---GGGGTT------------------------------------TTCTGGAGA---CTTTTGATAGGCACCATGGTTATGCTTATCGGAGGATATCTAGGTGAA---------GCA------------------GGG------TTC---------------------------------ATT------------------------------------------------------------------AATGCT------------------ACGCTTGGT---TTCGTTATTGGATTGGCTGGATGGGCATACATTCTGTATGAGATA---------------TTT------GCA---GGTGAAGCTGGAAAGGTCGCTGCAGAT------GAA---GCACCTGAGTCAGTT---AAG---TCG---GCA---TTT---AGC---TTAATG---CGTTGGATTGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAVAL-GV------------FWR-LLIGTMVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FVIGLAGWAYILYEI-----F--A-GEAGKVAAD--E-APESV-K-S-A-F-S-LM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927888 [IV-Proteo3-HF10_19P19] PRGD_OTU019_1dcfef5355d446455cfc66f44bfda1b9 gb|KJ927888| PRGD_OTU019_1dcfef5355d446455cfc66f44bfda1b9, putative proteorhodopsin gene, partial cds. PRGD_OTU019_1dcfef5355d446455cfc66f44bfda1b9, putative proteorhodopsin gene, partial cds. KJ927888 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTAATTACTGTTCCGCTTCAGATGATTGAATTTTACCTAATTCTTGCCGCATGTACAGCAGTGGCTTTGGGCGTTTTCTGGCGTCTTTTAATAGGAACTGCTGTTATGTTGATCGCCGGTTATCTTGGCGAGGCAGGCTTCATAAATCCATGGCTAGGATTCATCGTTGGTTTAGCTGGATGGGCTTATATTCTCTATGAAATCTTTGCTGGTGAAGCAGGGAAAGTTGCGGCTGATGAGGCCCCAGCTTCAGTCCAATCAGCTTTTAGTTTGATGCGTTGGATTGTGACAATT LITVPLQMIEFYLILAACTAVALGVFWRLLIGTAVMLIAGYLGEAGFINPWLGFIVGLAGWAYILYEIFAGEAGKVAADEAPASVQSAFSLMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTTCCGCTTCAGATGATTGAATTTTACCTAATTCTTGCCGCA---------TGT---ACAGCAGTGGCTTTG---GGCGTT------------------------------------TTCTGGCGT---CTTTTAATAGGAACTGCTGTTATGTTGATCGCCGGTTATCTTGGCGAG---------GCA------------------GGC------TTC---------------------------------ATA------------------------------------------------------------------AATCCA------------------TGGCTAGGA---TTCATCGTTGGTTTAGCTGGATGGGCTTATATTCTCTATGAAATC---------------TTT------GCT---GGTGAAGCAGGGAAAGTTGCGGCTGAT------GAG---GCCCCAGCTTCAGTC---CAA---TCA---GCT---TTT---AGT---TTGATG---CGTTGGATTGTGACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAVAL-GV------------FWR-LLIGTAVMLIAGYLGE---A------G--F-----------I----------------------NP------WLG-FIVGLAGWAYILYEI-----F--A-GEAGKVAAD--E-APASV-Q-S-A-F-S-LM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927926 [IV-Proteo3-HF10_19P19] PRGD_OTU019_fb6bb484f05f90f276698f80c484cc83 gb|KJ927926| PRGD_OTU019_fb6bb484f05f90f276698f80c484cc83, putative proteorhodopsin gene, partial cds. PRGD_OTU019_fb6bb484f05f90f276698f80c484cc83, putative proteorhodopsin gene, partial cds. KJ927926 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTAATTACTGTTCCGCTTCAGATGATTGAATTTTACCTAATTCTTGCCGCATGTACAGCAGTGGCTTTGGGCGTTTTCTGGCGTCTTTTAATAGGAACTGCTGTTATGTTGATCGCTGGTTATCTTGGTGAGGCAGGCTTCATAAATGCATGGCTAGGATTTATCGTTGGTTTAGCTGGATGGGCTTATATTCTTTATGAAATCTTTGCTGGTGAAGCAGGGAAAGTTGCGGCTGATGAGGCCCCAGCTTCAGTCCAATCAGCTTTTAGTTTGATGCGTTGGATTGTAACAATT LITVPLQMIEFYLILAACTAVALGVFWRLLIGTAVMLIAGYLGEAGFINAWLGFIVGLAGWAYILYEIFAGEAGKVAADEAPASVQSAFSLMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTTCCGCTTCAGATGATTGAATTTTACCTAATTCTTGCCGCA---------TGT---ACAGCAGTGGCTTTG---GGCGTT------------------------------------TTCTGGCGT---CTTTTAATAGGAACTGCTGTTATGTTGATCGCTGGTTATCTTGGTGAG---------GCA------------------GGC------TTC---------------------------------ATA------------------------------------------------------------------AATGCA------------------TGGCTAGGA---TTTATCGTTGGTTTAGCTGGATGGGCTTATATTCTTTATGAAATC---------------TTT------GCT---GGTGAAGCAGGGAAAGTTGCGGCTGAT------GAG---GCCCCAGCTTCAGTC---CAA---TCA---GCT---TTT---AGT---TTGATG---CGTTGGATTGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAVAL-GV------------FWR-LLIGTAVMLIAGYLGE---A------G--F-----------I----------------------NA------WLG-FIVGLAGWAYILYEI-----F--A-GEAGKVAAD--E-APASV-Q-S-A-F-S-LM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927914 [IV-Proteo3-HF10_19P19] PRGD_OTU019_afba09e30fe78c65c0ded3dc9f65e125 gb|KJ927914| PRGD_OTU019_afba09e30fe78c65c0ded3dc9f65e125, putative proteorhodopsin gene, partial cds. PRGD_OTU019_afba09e30fe78c65c0ded3dc9f65e125, putative proteorhodopsin gene, partial cds. KJ927914 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) CTAATTACTGTTCCGCTTCAGATGATTGAATTTTACCTAATTCTTGCCGCATGTACAGCAGTGGCTTTGGGCGTTTTCTGGCGTCTTTTGATAGGAACTGCTGTTATGTTGATCGCCGGTTATCTTGGTGAAGCAGGCTTCATAAATGCATGGCTAGGATTCATCGTTGGTTTAGCTGGATGGGCTTATATTCTGTATGAAATCTTTGCTGGTGAAGCAGGGAAGGTTGCGGCTGATGAGGCCCCAGCTTCAGTCCAATCAGCTTTTAGTTTGATGCGTTGGATTGTAACAATT LITVPLQMIEFYLILAACTAVALGVFWRLLIGTAVMLIAGYLGEAGFINAWLGFIVGLAGWAYILYEIFAGEAGKVAADEAPASVQSAFSLMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTTCCGCTTCAGATGATTGAATTTTACCTAATTCTTGCCGCA---------TGT---ACAGCAGTGGCTTTG---GGCGTT------------------------------------TTCTGGCGT---CTTTTGATAGGAACTGCTGTTATGTTGATCGCCGGTTATCTTGGTGAA---------GCA------------------GGC------TTC---------------------------------ATA------------------------------------------------------------------AATGCA------------------TGGCTAGGA---TTCATCGTTGGTTTAGCTGGATGGGCTTATATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCAGGGAAGGTTGCGGCTGAT------GAG---GCCCCAGCTTCAGTC---CAA---TCA---GCT---TTT---AGT---TTGATG---CGTTGGATTGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAVAL-GV------------FWR-LLIGTAVMLIAGYLGE---A------G--F-----------I----------------------NA------WLG-FIVGLAGWAYILYEI-----F--A-GEAGKVAAD--E-APASV-Q-S-A-F-S-LM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927896 [IV-Proteo3-HF10_19P19] PRGD_OTU019_41aeb5685be1d9424314c4b61c762601 gb|KJ927896| PRGD_OTU019_41aeb5685be1d9424314c4b61c762601, putative proteorhodopsin gene, partial cds. PRGD_OTU019_41aeb5685be1d9424314c4b61c762601, putative proteorhodopsin gene, partial cds. KJ927896 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATTACAGTGCCACTTCAAATGATCGAATTTTACCTAATTCTAGCCGCATGTACTGCCGTTGCAATGGGAGTATTCTGGCGACTTCTAGTGGGTACAGTAATAATGTTACTCGGCGGTTACCTAGGAGAGGCTGGCTTTATAAATGCTACAGTTGGTTTCGTAATTGGAATGGCAGGATGGGCATACATTTTGTATGAAATTTTTGCAGGTGAAGCTGGCAAAGTTGCTGCAGACGAGGCTCCTGAGTCCGTGAAGTCTGCATTTAGCTTAATGCGTTGGATTGTGACAATT LITVPLQMIEFYLILAACTAVAMGVFWRLLVGTVIMLLGGYLGEAGFINATVGFVIGMAGWAYILYEIFAGEAGKVAADEAPESVKSAFSLMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCACTTCAAATGATCGAATTTTACCTAATTCTAGCCGCA---------TGT---ACTGCCGTTGCAATG---GGAGTA------------------------------------TTCTGGCGA---CTTCTAGTGGGTACAGTAATAATGTTACTCGGCGGTTACCTAGGAGAG---------GCT------------------GGC------TTT---------------------------------ATA------------------------------------------------------------------AATGCT------------------ACAGTTGGT---TTCGTAATTGGAATGGCAGGATGGGCATACATTTTGTATGAAATT---------------TTT------GCA---GGTGAAGCTGGCAAAGTTGCTGCAGAC------GAG---GCTCCTGAGTCCGTG---AAG---TCT---GCA---TTT---AGC---TTAATG---CGTTGGATTGTGACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAVAM-GV------------FWR-LLVGTVIMLLGGYLGE---A------G--F-----------I----------------------NA------TVG-FVIGMAGWAYILYEI-----F--A-GEAGKVAAD--E-APESV-K-S-A-F-S-LM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ927925 [IV-Proteo3-HF10_19P19] PRGD_OTU019_f7df27633991e42ea51dd0c5a263dba5 gb|KJ927925| PRGD_OTU019_f7df27633991e42ea51dd0c5a263dba5, putative proteorhodopsin gene, partial cds. PRGD_OTU019_f7df27633991e42ea51dd0c5a263dba5, putative proteorhodopsin gene, partial cds. KJ927925 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-14.48, 113.45; -33.28, 45.35) TTAATTACAGTGCCACTTCAAATGATAGAGTTTTACTTGATTCTGGCCGCATGTACTGCTGTTGCAATGGGAGTATTCTGGCGACTTTTAGTTGGTACAGTAATCATGTTACTTGGTGGTTATCTGGGAGAGGCAGGCTTTATAAACGCCACACTTGGTTTCGTAATTGGAATGGCAGGATGGGCATACATACTGTATGAAATTTTTGCTGGTGAAGCTGGAAAAGTGGCTGCAGACGAGGCTCCAGAGTCCGTAAAATCTGCATTTAGCTTAATGCGTTGGATTGTGACAATT LITVPLQMIEFYLILAACTAVAMGVFWRLLVGTVIMLLGGYLGEAGFINATLGFVIGMAGWAYILYEIFAGEAGKVAADEAPESVKSAFSLMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCACTTCAAATGATAGAGTTTTACTTGATTCTGGCCGCA---------TGT---ACTGCTGTTGCAATG---GGAGTA------------------------------------TTCTGGCGA---CTTTTAGTTGGTACAGTAATCATGTTACTTGGTGGTTATCTGGGAGAG---------GCA------------------GGC------TTT---------------------------------ATA------------------------------------------------------------------AACGCC------------------ACACTTGGT---TTCGTAATTGGAATGGCAGGATGGGCATACATACTGTATGAAATT---------------TTT------GCT---GGTGAAGCTGGAAAAGTGGCTGCAGAC------GAG---GCTCCAGAGTCCGTA---AAA---TCT---GCA---TTT---AGC---TTAATG---CGTTGGATTGTGACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAVAM-GV------------FWR-LLVGTVIMLLGGYLGE---A------G--F-----------I----------------------NA------TLG-FVIGMAGWAYILYEI-----F--A-GEAGKVAAD--E-APESV-K-S-A-F-S-LM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ929903 [IV-Proteo3-HF10_19P19] PRGD_OTU354_otuREP_4690f0e0d68240264d8ba9c77d1c8111 gb|KJ929903| PRGD_OTU354_otuREP_4690f0e0d68240264d8ba9c77d1c8111, putative proteorhodopsin gene, partial cds. PRGD_OTU354_otuREP_4690f0e0d68240264d8ba9c77d1c8111, putative proteorhodopsin gene, partial cds. KJ929903 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) ATCATTACAGTTCCATTGCAGATGATAGAGTTTTATATAATTCTTGCAGCATGTACTTCAATTGCAATGGGAGTATTCTGGAGGCTATTTATAGGTTCTGTTATAATGCTTGTAGGCGGATACTTAGGTGAAGCAGGATTTATTAATGCAACACTTGGTTTCGTTATTGGAATGGCAGGTTGGATTTACATTCTGTATGAAATCTTTGCTGGAGAAGCTGGTAAAGTTAGTGCATCTGATGCACCTGAAGCGGTTCAATCTGGTTTTGCTACAATGAGATGGATTGTCACAATT IITVPLQMIEFYIILAACTSIAMGVFWRLFIGSVIMLVGGYLGEAGFINATLGFVIGMAGWIYILYEIFAGEAGKVSASDAPEAVQSGFATMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCATTACAGTTCCATTGCAGATGATAGAGTTTTATATAATTCTTGCAGCA---------TGT---ACTTCAATTGCAATG---GGAGTA------------------------------------TTCTGGAGG---CTATTTATAGGTTCTGTTATAATGCTTGTAGGCGGATACTTAGGTGAA---------GCA------------------GGA------TTT---------------------------------ATT------------------------------------------------------------------AATGCA------------------ACACTTGGT---TTCGTTATTGGAATGGCAGGTTGGATTTACATTCTGTATGAAATC---------------TTT------GCT---GGAGAAGCTGGTAAAGTTAGTGCATCT------GAT---GCACCTGAAGCGGTT---CAA---TCT---GGT---TTT---GCT---ACAATG---AGATGGATTGTCACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQMIEFYIILAA---C-TSIAM-GV------------FWR-LFIGSVIMLVGGYLGE---A------G--F-----------I----------------------NA------TLG-FVIGMAGWIYILYEI-----F--A-GEAGKVSAS--D-APEAV-Q-S-G-F-A-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ929934 [IV-Proteo3-HF10_19P19] PRGD_OTU379_38f75aac1afd8baef2b732b5fe5d08bb gb|KJ929934| PRGD_OTU379_38f75aac1afd8baef2b732b5fe5d08bb, putative proteorhodopsin gene, partial cds. PRGD_OTU379_38f75aac1afd8baef2b732b5fe5d08bb, putative proteorhodopsin gene, partial cds. KJ929934 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) ATAATTACAGTTCCACTACAAATGATTGAATTCTATTTGATCCTTGCTGCATGTACTGCAATCGCTGGTGGTGTTTTCTGGAGATTATTCCTTGGATCTTTAGTGATGTTAATCGGTGGATATTTAGGTGAAGCTGGTTTTATAAATGCAACACTTGGATTTGTAATCGGAATGGCTGGATGGATATTCATCCTTTATGAAATCTTTGCTGGTGAAGCTGGTAAGGTAAGTGCAGAAAGTGCACCTGAATCCGTACAAACAGCCTTTAACACAATGAAATGGATTGTCACAATT IITVPLQMIEFYLILAACTAIAGGVFWRLFLGSLVMLIGGYLGEAGFINATLGFVIGMAGWIFILYEIFAGEAGKVSAESAPESVQTAFNTMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATTACAGTTCCACTACAAATGATTGAATTCTATTTGATCCTTGCTGCA---------TGT---ACTGCAATCGCTGGT---GGTGTT------------------------------------TTCTGGAGA---TTATTCCTTGGATCTTTAGTGATGTTAATCGGTGGATATTTAGGTGAA---------GCT------------------GGT------TTT---------------------------------ATA------------------------------------------------------------------AATGCA------------------ACACTTGGA---TTTGTAATCGGAATGGCTGGATGGATATTCATCCTTTATGAAATC---------------TTT------GCT---GGTGAAGCTGGTAAGGTAAGTGCAGAA------AGT---GCACCTGAATCCGTA---CAA---ACA---GCC---TTT---AAC---ACAATG---AAATGGATTGTCACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQMIEFYLILAA---C-TAIAG-GV------------FWR-LFLGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FVIGMAGWIFILYEI-----F--A-GEAGKVSAE--S-APESV-Q-T-A-F-N-TM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ929941 [IV-Proteo3-HF10_19P19] PRGD_OTU379_b637ab512e9cc985663e20c96b1b1d12 gb|KJ929941| PRGD_OTU379_b637ab512e9cc985663e20c96b1b1d12, putative proteorhodopsin gene, partial cds. PRGD_OTU379_b637ab512e9cc985663e20c96b1b1d12, putative proteorhodopsin gene, partial cds. KJ929941 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) ATAATTACAGTTCCACTACAAATGATTGAATTCTATTTGATCCTTGCTGCATGTACCGCAATCGCTGGTGGTGTTTTCTGGAGATTATTCCTTGGATCTTTAGTAATGTTAATCGGTGGATATTTAGGTGAAGCTGGTTTTATTAATGCAACACTTGGATTTGTAATCGGAATGGCTGGATGGATATTCATCCTTTATGAAATCTTTGCTGGTGAAGCTGGTAAGGTTAGTGCAGAAAGTGCACCTGAATCCGTGCAATCAGCCTTTAACACAATGAAATGGATTGTCACAATT IITVPLQMIEFYLILAACTAIAGGVFWRLFLGSLVMLIGGYLGEAGFINATLGFVIGMAGWIFILYEIFAGEAGKVSAESAPESVQSAFNTMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATTACAGTTCCACTACAAATGATTGAATTCTATTTGATCCTTGCTGCA---------TGT---ACCGCAATCGCTGGT---GGTGTT------------------------------------TTCTGGAGA---TTATTCCTTGGATCTTTAGTAATGTTAATCGGTGGATATTTAGGTGAA---------GCT------------------GGT------TTT---------------------------------ATT------------------------------------------------------------------AATGCA------------------ACACTTGGA---TTTGTAATCGGAATGGCTGGATGGATATTCATCCTTTATGAAATC---------------TTT------GCT---GGTGAAGCTGGTAAGGTTAGTGCAGAA------AGT---GCACCTGAATCCGTG---CAA---TCA---GCC---TTT---AAC---ACAATG---AAATGGATTGTCACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQMIEFYLILAA---C-TAIAG-GV------------FWR-LFLGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FVIGMAGWIFILYEI-----F--A-GEAGKVSAE--S-APESV-Q-S-A-F-N-TM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ929933 [IV-Proteo3-HF10_19P19] PRGD_OTU379_2ea9540637fcf6abf696e76123e8b1a4 gb|KJ929933| PRGD_OTU379_2ea9540637fcf6abf696e76123e8b1a4, putative proteorhodopsin gene, partial cds. PRGD_OTU379_2ea9540637fcf6abf696e76123e8b1a4, putative proteorhodopsin gene, partial cds. KJ929933 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATAATTACAGTTCCACTACAAATGATTGAATTCTATTTAATCCTTGCTGCATGTACCGCAATCGCTGGTGGTGTTTTCTGGAGATTATTCCTTGGATCTTTAGTAATGTTAATCGGTGGATATTTAGGTGAAGCTGGTTTTATAAATGCAACACTTGGATTTGTAATCGGAATGGCTGGATGGATATTCATCCTTTATGAAATCTTTGCTGGTGAAGCTGGTAAGGTTAGTGCAGAAAGTGCACCTGAATCCGTACAAACAGCCTTTAATACAATGAAATGGATTGTCACAATT IITVPLQMIEFYLILAACTAIAGGVFWRLFLGSLVMLIGGYLGEAGFINATLGFVIGMAGWIFILYEIFAGEAGKVSAESAPESVQTAFNTMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATTACAGTTCCACTACAAATGATTGAATTCTATTTAATCCTTGCTGCA---------TGT---ACCGCAATCGCTGGT---GGTGTT------------------------------------TTCTGGAGA---TTATTCCTTGGATCTTTAGTAATGTTAATCGGTGGATATTTAGGTGAA---------GCT------------------GGT------TTT---------------------------------ATA------------------------------------------------------------------AATGCA------------------ACACTTGGA---TTTGTAATCGGAATGGCTGGATGGATATTCATCCTTTATGAAATC---------------TTT------GCT---GGTGAAGCTGGTAAGGTTAGTGCAGAA------AGT---GCACCTGAATCCGTA---CAA---ACA---GCC---TTT---AAT---ACAATG---AAATGGATTGTCACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQMIEFYLILAA---C-TAIAG-GV------------FWR-LFLGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FVIGMAGWIFILYEI-----F--A-GEAGKVSAE--S-APESV-Q-T-A-F-N-TM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ929945 [IV-Proteo3-HF10_19P19] PRGD_OTU379_f494a4adf80afb41fa1c4d27dfd66da0 gb|KJ929945| PRGD_OTU379_f494a4adf80afb41fa1c4d27dfd66da0, putative proteorhodopsin gene, partial cds. PRGD_OTU379_f494a4adf80afb41fa1c4d27dfd66da0, putative proteorhodopsin gene, partial cds. KJ929945 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) ATAATTACAGTTCCACTACAAATGATTGAATTCTATTTAATTCTTGCCGCATGTACTGCAATCGCTGGTGGTGTTTTCTGGAGATTATTTCTTGGATCTTTAGTAATGTTAATTGGTGGATATTTAGGTGAAGCTGGTTTTATAAATGCAACACTTGGATTTGTAATCGGAATGGCTGGATGGATATTCATCCTGTATGAAATCTTTGCTGGTGAAGCGGGTAAGGTTAGTGCAGAAAGTGCACCTGAATCCGTACAAACAGCCTTTAATACAATGAAATGGATTGTAACAATT IITVPLQMIEFYLILAACTAIAGGVFWRLFLGSLVMLIGGYLGEAGFINATLGFVIGMAGWIFILYEIFAGEAGKVSAESAPESVQTAFNTMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATTACAGTTCCACTACAAATGATTGAATTCTATTTAATTCTTGCCGCA---------TGT---ACTGCAATCGCTGGT---GGTGTT------------------------------------TTCTGGAGA---TTATTTCTTGGATCTTTAGTAATGTTAATTGGTGGATATTTAGGTGAA---------GCT------------------GGT------TTT---------------------------------ATA------------------------------------------------------------------AATGCA------------------ACACTTGGA---TTTGTAATCGGAATGGCTGGATGGATATTCATCCTGTATGAAATC---------------TTT------GCT---GGTGAAGCGGGTAAGGTTAGTGCAGAA------AGT---GCACCTGAATCCGTA---CAA---ACA---GCC---TTT---AAT---ACAATG---AAATGGATTGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQMIEFYLILAA---C-TAIAG-GV------------FWR-LFLGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FVIGMAGWIFILYEI-----F--A-GEAGKVSAE--S-APESV-Q-T-A-F-N-TM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ929931 [IV-Proteo3-HF10_19P19] PRGD_OTU379_1105d18329aab2e9e23a5423b5f3bddd gb|KJ929931| PRGD_OTU379_1105d18329aab2e9e23a5423b5f3bddd, putative proteorhodopsin gene, partial cds. PRGD_OTU379_1105d18329aab2e9e23a5423b5f3bddd, putative proteorhodopsin gene, partial cds. KJ929931 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) ATAATTACAGTTCCACTACAAATGATTGAATTCTATTTAATCCTTGCTGCATGTACCGCGATCGCTGGTGGTGTTTTCTGGAGATTGTTTCTTGGATCTTTAGTAATGTTGATTGGTGGATACTTAGGTGAAGCTGGCTTTATAAATGCAACACTTGGATTTGTAATCGGAATGGCTGGTTGGATATTCATTCTGTATGAAATCTTTGCTGGTGAAGCTGGTAAGGTTAGTGCAGAAAGTGCACCTGAATCTGTACAGTCAGCCTTCAACACAATGAAATGGATTGTAACAATT IITVPLQMIEFYLILAACTAIAGGVFWRLFLGSLVMLIGGYLGEAGFINATLGFVIGMAGWIFILYEIFAGEAGKVSAESAPESVQSAFNTMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATTACAGTTCCACTACAAATGATTGAATTCTATTTAATCCTTGCTGCA---------TGT---ACCGCGATCGCTGGT---GGTGTT------------------------------------TTCTGGAGA---TTGTTTCTTGGATCTTTAGTAATGTTGATTGGTGGATACTTAGGTGAA---------GCT------------------GGC------TTT---------------------------------ATA------------------------------------------------------------------AATGCA------------------ACACTTGGA---TTTGTAATCGGAATGGCTGGTTGGATATTCATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGTAAGGTTAGTGCAGAA------AGT---GCACCTGAATCTGTA---CAG---TCA---GCC---TTC---AAC---ACAATG---AAATGGATTGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQMIEFYLILAA---C-TAIAG-GV------------FWR-LFLGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FVIGMAGWIFILYEI-----F--A-GEAGKVSAE--S-APESV-Q-S-A-F-N-TM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ929938 [IV-Proteo3-HF10_19P19] PRGD_OTU379_68c43e7669030c82a4f5ed09ddf77482 gb|KJ929938| PRGD_OTU379_68c43e7669030c82a4f5ed09ddf77482, putative proteorhodopsin gene, partial cds. PRGD_OTU379_68c43e7669030c82a4f5ed09ddf77482, putative proteorhodopsin gene, partial cds. KJ929938 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-35.05, 23.73) ATAATTACAGTTCCACTACAAATGATTGAATTCTATTTAATCCTTGCTGCATGTACCGCAATCGCTGGTGGTGTTTTCTGGAGATTATTTCTTGGATCTTTAGTAATGTTAGTCGGTGGATACTTAGGTGAAGCTGGTTTTATAAATGCGACACTAGGATTTGTAATTGGAATGGCTGGATGGATATTCATCTTGTATGAAATCTTTGCTGGTGAGGCTGGTAAGGTTAGTGCAGAAAGCGCACCTGAGTCCGTACAGACAGCCTTTAACACAATGAAATGGATTGTAACAATT IITVPLQMIEFYLILAACTAIAGGVFWRLFLGSLVMLVGGYLGEAGFINATLGFVIGMAGWIFILYEIFAGEAGKVSAESAPESVQTAFNTMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATTACAGTTCCACTACAAATGATTGAATTCTATTTAATCCTTGCTGCA---------TGT---ACCGCAATCGCTGGT---GGTGTT------------------------------------TTCTGGAGA---TTATTTCTTGGATCTTTAGTAATGTTAGTCGGTGGATACTTAGGTGAA---------GCT------------------GGT------TTT---------------------------------ATA------------------------------------------------------------------AATGCG------------------ACACTAGGA---TTTGTAATTGGAATGGCTGGATGGATATTCATCTTGTATGAAATC---------------TTT------GCT---GGTGAGGCTGGTAAGGTTAGTGCAGAA------AGC---GCACCTGAGTCCGTA---CAG---ACA---GCC---TTT---AAC---ACAATG---AAATGGATTGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQMIEFYLILAA---C-TAIAG-GV------------FWR-LFLGSLVMLVGGYLGE---A------G--F-----------I----------------------NA------TLG-FVIGMAGWIFILYEI-----F--A-GEAGKVSAE--S-APESV-Q-T-A-F-N-TM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ929936 [IV-Proteo3-HF10_19P19] PRGD_OTU379_49ef9691989ebc2eb4fc1d21f2060701 gb|KJ929936| PRGD_OTU379_49ef9691989ebc2eb4fc1d21f2060701, putative proteorhodopsin gene, partial cds. PRGD_OTU379_49ef9691989ebc2eb4fc1d21f2060701, putative proteorhodopsin gene, partial cds. KJ929936 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-14.48, 113.45) ATTATTACAGTTCCACTACAAATGATTGAATTCTATTTAATCCTTGCAGCATGTACCGCAATAGCCGGTGGTGTTTTCTGGAGATTATTCCTTGGATCTTTAGTAATGTTAATCGGTGGATATTTAGGTGAAGCTGGTTTCATAAATGCAACTGTTGGTTTTGTAATCGGAATGGCTGGATGGATATTCATCCTGTATGAAATCTTTGCTGGTGAAGCGGGTAAGGTTAGTGCAGAAAGTGCACCAGAGTCCGTACAGACAGCTTTTAACACTATGAAATGGATTGTGACAATT IITVPLQMIEFYLILAACTAIAGGVFWRLFLGSLVMLIGGYLGEAGFINATVGFVIGMAGWIFILYEIFAGEAGKVSAESAPESVQTAFNTMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTATTACAGTTCCACTACAAATGATTGAATTCTATTTAATCCTTGCAGCA---------TGT---ACCGCAATAGCCGGT---GGTGTT------------------------------------TTCTGGAGA---TTATTCCTTGGATCTTTAGTAATGTTAATCGGTGGATATTTAGGTGAA---------GCT------------------GGT------TTC---------------------------------ATA------------------------------------------------------------------AATGCA------------------ACTGTTGGT---TTTGTAATCGGAATGGCTGGATGGATATTCATCCTGTATGAAATC---------------TTT------GCT---GGTGAAGCGGGTAAGGTTAGTGCAGAA------AGT---GCACCAGAGTCCGTA---CAG---ACA---GCT---TTT---AAC---ACTATG---AAATGGATTGTGACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQMIEFYLILAA---C-TAIAG-GV------------FWR-LFLGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TVG-FVIGMAGWIFILYEI-----F--A-GEAGKVSAE--S-APESV-Q-T-A-F-N-TM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ929935 [IV-Proteo3-HF10_19P19] PRGD_OTU379_4747186e77b86b2505cd676a9933b5c1 gb|KJ929935| PRGD_OTU379_4747186e77b86b2505cd676a9933b5c1, putative proteorhodopsin gene, partial cds. PRGD_OTU379_4747186e77b86b2505cd676a9933b5c1, putative proteorhodopsin gene, partial cds. KJ929935 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) ATAATAACAGTACCACTTCAGATGATTGAATTCTATTTAATTCTAGCAGCATGTACTGCAATAGCTGGCGGAGTTTTCTGGAGATTATTTCTTGGATCTTTAGTAATGTTAATTGGTGGATATTTAGGTGAAGCTGGTTTTATTAACGCAACTCTTGGTTTTGTTATTGGAATGGCTGGATGGATATTCATTCTATATGAAATCTTCGCAGGTGAAGCTGGTAAAGTTAGTGCAGAAAGTGCACCTGAATCCGTACAGACAGCCTTTAACACAATGAAATGGATTGTCACAATT IITVPLQMIEFYLILAACTAIAGGVFWRLFLGSLVMLIGGYLGEAGFINATLGFVIGMAGWIFILYEIFAGEAGKVSAESAPESVQTAFNTMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATAACAGTACCACTTCAGATGATTGAATTCTATTTAATTCTAGCAGCA---------TGT---ACTGCAATAGCTGGC---GGAGTT------------------------------------TTCTGGAGA---TTATTTCTTGGATCTTTAGTAATGTTAATTGGTGGATATTTAGGTGAA---------GCT------------------GGT------TTT---------------------------------ATT------------------------------------------------------------------AACGCA------------------ACTCTTGGT---TTTGTTATTGGAATGGCTGGATGGATATTCATTCTATATGAAATC---------------TTC------GCA---GGTGAAGCTGGTAAAGTTAGTGCAGAA------AGT---GCACCTGAATCCGTA---CAG---ACA---GCC---TTT---AAC---ACAATG---AAATGGATTGTCACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQMIEFYLILAA---C-TAIAG-GV------------FWR-LFLGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FVIGMAGWIFILYEI-----F--A-GEAGKVSAE--S-APESV-Q-T-A-F-N-TM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ929944 [IV-Proteo3-HF10_19P19] PRGD_OTU379_eae821fb19afc76b82b6c752dac21d7f gb|KJ929944| PRGD_OTU379_eae821fb19afc76b82b6c752dac21d7f, putative proteorhodopsin gene, partial cds. PRGD_OTU379_eae821fb19afc76b82b6c752dac21d7f, putative proteorhodopsin gene, partial cds. KJ929944 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) ATAATAACAGTTCCACTTCAAATGATTGAATTCTATTTAATTCTAGCAGCATGTACTGCAATAGCTGGTGGAGTTTTCTGGAGATTATTTCTTGGGTCTTTAGTAATGTTAATTGGTGGATATTTAGGTGAAGCTGGTTTTATTAACGCAACTCTTGGTTTTGTTATTGGAATGGCTGGATGGATATTCATTCTATATGAAATCTTTGCAGGTGAAGCTGGTAAAGTTAGCGCAGAAAGTGCACCTGAATCCGTACAGACAGCCTTTAACACAATGAAATGGATTGTCACAATT IITVPLQMIEFYLILAACTAIAGGVFWRLFLGSLVMLIGGYLGEAGFINATLGFVIGMAGWIFILYEIFAGEAGKVSAESAPESVQTAFNTMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATAACAGTTCCACTTCAAATGATTGAATTCTATTTAATTCTAGCAGCA---------TGT---ACTGCAATAGCTGGT---GGAGTT------------------------------------TTCTGGAGA---TTATTTCTTGGGTCTTTAGTAATGTTAATTGGTGGATATTTAGGTGAA---------GCT------------------GGT------TTT---------------------------------ATT------------------------------------------------------------------AACGCA------------------ACTCTTGGT---TTTGTTATTGGAATGGCTGGATGGATATTCATTCTATATGAAATC---------------TTT------GCA---GGTGAAGCTGGTAAAGTTAGCGCAGAA------AGT---GCACCTGAATCCGTA---CAG---ACA---GCC---TTT---AAC---ACAATG---AAATGGATTGTCACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQMIEFYLILAA---C-TAIAG-GV------------FWR-LFLGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FVIGMAGWIFILYEI-----F--A-GEAGKVSAE--S-APESV-Q-T-A-F-N-TM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ929932 [IV-Proteo3-HF10_19P19] PRGD_OTU379_24b19335fa5cd9f4563f979011866708 gb|KJ929932| PRGD_OTU379_24b19335fa5cd9f4563f979011866708, putative proteorhodopsin gene, partial cds. PRGD_OTU379_24b19335fa5cd9f4563f979011866708, putative proteorhodopsin gene, partial cds. KJ929932 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) ATAATAACAGTTCCACTTCAAATGATTGAATTCTATTTAATTCTAGCAGCATGTACTGCAATAGCTGGTGGAGTTTTCTGGAGATTATTTCTTGGATCTTTGGTAATGTTAATTGGTGGATATTTAGGTGAAGCTGGTTTTATTAATGCAACTCTCGGTTTTGTAATCGGAATGGCTGGATGGATATTCATTCTATATGAAATCTTTGCAGGTGAAGCTGGTAAAGTTAGTGCAGAAAGTGCACCTGAATCCGTACAGACAGCCTTTAACACAATGAAATGGATTGTCACAATT IITVPLQMIEFYLILAACTAIAGGVFWRLFLGSLVMLIGGYLGEAGFINATLGFVIGMAGWIFILYEIFAGEAGKVSAESAPESVQTAFNTMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATAACAGTTCCACTTCAAATGATTGAATTCTATTTAATTCTAGCAGCA---------TGT---ACTGCAATAGCTGGT---GGAGTT------------------------------------TTCTGGAGA---TTATTTCTTGGATCTTTGGTAATGTTAATTGGTGGATATTTAGGTGAA---------GCT------------------GGT------TTT---------------------------------ATT------------------------------------------------------------------AATGCA------------------ACTCTCGGT---TTTGTAATCGGAATGGCTGGATGGATATTCATTCTATATGAAATC---------------TTT------GCA---GGTGAAGCTGGTAAAGTTAGTGCAGAA------AGT---GCACCTGAATCCGTA---CAG---ACA---GCC---TTT---AAC---ACAATG---AAATGGATTGTCACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQMIEFYLILAA---C-TAIAG-GV------------FWR-LFLGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TLG-FVIGMAGWIFILYEI-----F--A-GEAGKVSAE--S-APESV-Q-T-A-F-N-TM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ929930 [IV-Proteo3-HF10_19P19] PRGD_OTU379_0d8a0a490b67afbc1b1229d83ddeb0f6 gb|KJ929930| PRGD_OTU379_0d8a0a490b67afbc1b1229d83ddeb0f6, putative proteorhodopsin gene, partial cds. PRGD_OTU379_0d8a0a490b67afbc1b1229d83ddeb0f6, putative proteorhodopsin gene, partial cds. KJ929930 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) ATAATTACAGTTCCACTTCAAATGATTGAATTCTATTTAATCCTTGCAGCATGTACTGCTGTTGCTGGTGGAGTTTTCTGGAGATTATTCCTTGGATCTTTAGTGATGTTAATCGGTGGATATTTAGGTGAAGCTGGTTTTATAAACGCAACTATTGGTTTTGTAGTTGGAATGGCTGGATGGATATTCATTCTATATGAAATTTTTGCTGGTGAAGCAAGTAAAGTCAGTGCAGATAGTGCACCTGAATCTGTTCAATCAGCTTTTAATACAATGAAATGGATTGTGACAATT IITVPLQMIEFYLILAACTAVAGGVFWRLFLGSLVMLIGGYLGEAGFINATIGFVVGMAGWIFILYEIFAGEASKVSADSAPESVQSAFNTMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATTACAGTTCCACTTCAAATGATTGAATTCTATTTAATCCTTGCAGCA---------TGT---ACTGCTGTTGCTGGT---GGAGTT------------------------------------TTCTGGAGA---TTATTCCTTGGATCTTTAGTGATGTTAATCGGTGGATATTTAGGTGAA---------GCT------------------GGT------TTT---------------------------------ATA------------------------------------------------------------------AACGCA------------------ACTATTGGT---TTTGTAGTTGGAATGGCTGGATGGATATTCATTCTATATGAAATT---------------TTT------GCT---GGTGAAGCAAGTAAAGTCAGTGCAGAT------AGT---GCACCTGAATCTGTT---CAA---TCA---GCT---TTT---AAT---ACAATG---AAATGGATTGTGACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQMIEFYLILAA---C-TAVAG-GV------------FWR-LFLGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TIG-FVVGMAGWIFILYEI-----F--A-GEASKVSAD--S-APESV-Q-S-A-F-N-TM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ929946 [IV-Proteo3-HF10_19P19] PRGD_OTU379_f6dc65edb0384eb34d5e1bb839ad6e2c gb|KJ929946| PRGD_OTU379_f6dc65edb0384eb34d5e1bb839ad6e2c, putative proteorhodopsin gene, partial cds. PRGD_OTU379_f6dc65edb0384eb34d5e1bb839ad6e2c, putative proteorhodopsin gene, partial cds. KJ929946 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) ATTATTACAGTTCCACTTCAAATGATTGAATTCTATTTAATCCTTGCTGCATGTACTGCTGTTGCTGGTGGAGTTTTCTGGAGATTATTTCTTGGATCTTTAGTGATGTTAATCGGTGGATATTTAGGTGAAGCTGGTTTTATAAACGCAACTATTGGTTTTGTAGTTGGAATGGCTGGATGGATTTTCATTCTATATGAAATATTTGCTGGTGAAGCAAGTAAAGTCAGTGCAGATAGTGCACCTGAATCCGTTCAATCAGCTTTTAATACAATGAAATGGATAGTAACAATT IITVPLQMIEFYLILAACTAVAGGVFWRLFLGSLVMLIGGYLGEAGFINATIGFVVGMAGWIFILYEIFAGEASKVSADSAPESVQSAFNTMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTATTACAGTTCCACTTCAAATGATTGAATTCTATTTAATCCTTGCTGCA---------TGT---ACTGCTGTTGCTGGT---GGAGTT------------------------------------TTCTGGAGA---TTATTTCTTGGATCTTTAGTGATGTTAATCGGTGGATATTTAGGTGAA---------GCT------------------GGT------TTT---------------------------------ATA------------------------------------------------------------------AACGCA------------------ACTATTGGT---TTTGTAGTTGGAATGGCTGGATGGATTTTCATTCTATATGAAATA---------------TTT------GCT---GGTGAAGCAAGTAAAGTCAGTGCAGAT------AGT---GCACCTGAATCCGTT---CAA---TCA---GCT---TTT---AAT---ACAATG---AAATGGATAGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQMIEFYLILAA---C-TAVAG-GV------------FWR-LFLGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TIG-FVVGMAGWIFILYEI-----F--A-GEASKVSAD--S-APESV-Q-S-A-F-N-TM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ929929 [IV-Proteo3-HF10_19P19] PRGD_OTU379_0c36be485ac5277fac683736892101bb gb|KJ929929| PRGD_OTU379_0c36be485ac5277fac683736892101bb, putative proteorhodopsin gene, partial cds. PRGD_OTU379_0c36be485ac5277fac683736892101bb, putative proteorhodopsin gene, partial cds. KJ929929 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) ATAATTACAGTTCCACTTCAAATGATTGAATTCTATTTAATCCTTGCGGCATGTACTGCTGTTGCTGGTGGAGTTTTCTGGAGATTATTCCTTGGATCTTTAGTGATGTTAATCGGTGGATATTTAGGTGAAGCTGGTTTTATAAACGCAACTATTGGTTTTGTAGTTGGAATGGCTGGATGGATATTCATTCTATATGAAATATTTGCTGGTGAAGCAAGTAAAGTTAGTGCAGATAGTGCACCTGAATCCGTTCAATCAGCTTTTAATACAATGAAATGGATTGTGACAATT IITVPLQMIEFYLILAACTAVAGGVFWRLFLGSLVMLIGGYLGEAGFINATIGFVVGMAGWIFILYEIFAGEASKVSADSAPESVQSAFNTMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATTACAGTTCCACTTCAAATGATTGAATTCTATTTAATCCTTGCGGCA---------TGT---ACTGCTGTTGCTGGT---GGAGTT------------------------------------TTCTGGAGA---TTATTCCTTGGATCTTTAGTGATGTTAATCGGTGGATATTTAGGTGAA---------GCT------------------GGT------TTT---------------------------------ATA------------------------------------------------------------------AACGCA------------------ACTATTGGT---TTTGTAGTTGGAATGGCTGGATGGATATTCATTCTATATGAAATA---------------TTT------GCT---GGTGAAGCAAGTAAAGTTAGTGCAGAT------AGT---GCACCTGAATCCGTT---CAA---TCA---GCT---TTT---AAT---ACAATG---AAATGGATTGTGACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQMIEFYLILAA---C-TAVAG-GV------------FWR-LFLGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TIG-FVVGMAGWIFILYEI-----F--A-GEASKVSAD--S-APESV-Q-S-A-F-N-TM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ929942 [IV-Proteo3-HF10_19P19] PRGD_OTU379_bb5456d32b099cbca6ad2642d0d3eb77 gb|KJ929942| PRGD_OTU379_bb5456d32b099cbca6ad2642d0d3eb77, putative proteorhodopsin gene, partial cds. PRGD_OTU379_bb5456d32b099cbca6ad2642d0d3eb77, putative proteorhodopsin gene, partial cds. KJ929942 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) ATAATTACAGTTCCACTTCAAATGATTGAATTCTATTTAATCCTTGCAGCATGTACTGCAGTTGCTGGTGGAGTTTTCTGGAGATTATTCCTTGGATCTTTAGTAATGTTAATCGGTGGATATTTAGGTGAAGCTGGTTTTATAAACGCAACTATTGGTTTTGTAGTTGGAATGGCTGGATGGATATTCATTCTATATGAAATATTTGCTGGTGAAGCAAGTAAAGTTAGTGCAGATAGTGCGCCGGAATCTGTTCAATCAGCTTTTAATACAATGAAATGGATTGTGACAATT IITVPLQMIEFYLILAACTAVAGGVFWRLFLGSLVMLIGGYLGEAGFINATIGFVVGMAGWIFILYEIFAGEASKVSADSAPESVQSAFNTMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATTACAGTTCCACTTCAAATGATTGAATTCTATTTAATCCTTGCAGCA---------TGT---ACTGCAGTTGCTGGT---GGAGTT------------------------------------TTCTGGAGA---TTATTCCTTGGATCTTTAGTAATGTTAATCGGTGGATATTTAGGTGAA---------GCT------------------GGT------TTT---------------------------------ATA------------------------------------------------------------------AACGCA------------------ACTATTGGT---TTTGTAGTTGGAATGGCTGGATGGATATTCATTCTATATGAAATA---------------TTT------GCT---GGTGAAGCAAGTAAAGTTAGTGCAGAT------AGT---GCGCCGGAATCTGTT---CAA---TCA---GCT---TTT---AAT---ACAATG---AAATGGATTGTGACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQMIEFYLILAA---C-TAVAG-GV------------FWR-LFLGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TIG-FVVGMAGWIFILYEI-----F--A-GEASKVSAD--S-APESV-Q-S-A-F-N-TM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ929928 [IV-Proteo3-HF10_19P19] PRGD_OTU379_otuREP_566e64350d632576b82b333e365ea847 gb|KJ929928| PRGD_OTU379_otuREP_566e64350d632576b82b333e365ea847, putative proteorhodopsin gene, partial cds. PRGD_OTU379_otuREP_566e64350d632576b82b333e365ea847, putative proteorhodopsin gene, partial cds. KJ929928 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) ATAATTACAGTTCCACTACAAATGATTGAATTCTATTTAATCCTCGCAGCATGTACTGCGGTTGCTGGTGGAGTTTTCTGGAGATTATTTCTTGGATCTTTAGTAATGTTAATTGGTGGATATTTGGGTGAAGCTGGTTTTATAAACGCAACTATTGGGTTTGTAATTGGTATGGTTGGATGGATATTCATCCTATACGAAATATTTGCTGGTGAAGCTAGTAAAGTTAGTGCAGAAAGTGCACCTGAATCTGTACAATCAGCCTTTAATACAATGAAATGGATTGTGACAATT IITVPLQMIEFYLILAACTAVAGGVFWRLFLGSLVMLIGGYLGEAGFINATIGFVIGMVGWIFILYEIFAGEASKVSAESAPESVQSAFNTMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATTACAGTTCCACTACAAATGATTGAATTCTATTTAATCCTCGCAGCA---------TGT---ACTGCGGTTGCTGGT---GGAGTT------------------------------------TTCTGGAGA---TTATTTCTTGGATCTTTAGTAATGTTAATTGGTGGATATTTGGGTGAA---------GCT------------------GGT------TTT---------------------------------ATA------------------------------------------------------------------AACGCA------------------ACTATTGGG---TTTGTAATTGGTATGGTTGGATGGATATTCATCCTATACGAAATA---------------TTT------GCT---GGTGAAGCTAGTAAAGTTAGTGCAGAA------AGT---GCACCTGAATCTGTA---CAA---TCA---GCC---TTT---AAT---ACAATG---AAATGGATTGTGACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQMIEFYLILAA---C-TAVAG-GV------------FWR-LFLGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TIG-FVIGMVGWIFILYEI-----F--A-GEASKVSAE--S-APESV-Q-S-A-F-N-TM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ929940 [IV-Proteo3-HF10_19P19] PRGD_OTU379_ac23d6b9f77bc8754a46241f9a5a87a5 gb|KJ929940| PRGD_OTU379_ac23d6b9f77bc8754a46241f9a5a87a5, putative proteorhodopsin gene, partial cds. PRGD_OTU379_ac23d6b9f77bc8754a46241f9a5a87a5, putative proteorhodopsin gene, partial cds. KJ929940 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Indian Ocean (-14.48, 113.45) ATAATTACAGTTCCACTACAAATGATTGAATTCTATTTAATCCTCGCAGCATGTACTGCGGTTGCTGGTGGAGTTTTCTGGAGATTATTCCTTGGATCTTTAGTAATGTTAATTGGTGGATATTTGGGTGAAGCTGGTTTTATAAATGTAACTATTGGCTTTGTAATTGGTATGGTTGGATGGATATTCATCCTATACGAAATATTTGCCGGTGAAGCTAGTAAAATTAGTGCAGAGAGTGCACCTGAATCCGTTCAATCTGCCTTTAATACAATGAAATGGATTGTGACAATT IITVPLQMIEFYLILAACTAVAGGVFWRLFLGSLVMLIGGYLGEAGFINVTIGFVIGMVGWIFILYEIFAGEASKISAESAPESVQSAFNTMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATTACAGTTCCACTACAAATGATTGAATTCTATTTAATCCTCGCAGCA---------TGT---ACTGCGGTTGCTGGT---GGAGTT------------------------------------TTCTGGAGA---TTATTCCTTGGATCTTTAGTAATGTTAATTGGTGGATATTTGGGTGAA---------GCT------------------GGT------TTT---------------------------------ATA------------------------------------------------------------------AATGTA------------------ACTATTGGC---TTTGTAATTGGTATGGTTGGATGGATATTCATCCTATACGAAATA---------------TTT------GCC---GGTGAAGCTAGTAAAATTAGTGCAGAG------AGT---GCACCTGAATCCGTT---CAA---TCT---GCC---TTT---AAT---ACAATG---AAATGGATTGTGACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQMIEFYLILAA---C-TAVAG-GV------------FWR-LFLGSLVMLIGGYLGE---A------G--F-----------I----------------------NV------TIG-FVIGMVGWIFILYEI-----F--A-GEASKISAE--S-APESV-Q-S-A-F-N-TM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ929939 [IV-Proteo3-HF10_19P19] PRGD_OTU379_a2cce854ad6e339c7d834dd782ae3ada gb|KJ929939| PRGD_OTU379_a2cce854ad6e339c7d834dd782ae3ada, putative proteorhodopsin gene, partial cds. PRGD_OTU379_a2cce854ad6e339c7d834dd782ae3ada, putative proteorhodopsin gene, partial cds. KJ929939 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) ATAATTACAGTTCCACTACAAATGATTGAATTCTATTTAATCCTTGCAGCATGTACTGCAATTGCTGGTGGAGTTTTCTGGAGATTATTCCTTGGATCTCTAGTGATGTTAATTGGTGGATACTTAGGTGAAGCTGGTTTTATAAATTCAACTGTTGGTTTTGTAATTGGAATGGCTGGTTGGATATTCATCTTATATGAAATTTTTGCTGGTGAAGCTAGCAAAGTTAGTGCAGATAGTGCACCTGAATCCGTACAAACAGCCTTTAACACAATGAGATGGATTGTGACAATT IITVPLQMIEFYLILAACTAIAGGVFWRLFLGSLVMLIGGYLGEAGFINSTVGFVIGMAGWIFILYEIFAGEASKVSADSAPESVQTAFNTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATTACAGTTCCACTACAAATGATTGAATTCTATTTAATCCTTGCAGCA---------TGT---ACTGCAATTGCTGGT---GGAGTT------------------------------------TTCTGGAGA---TTATTCCTTGGATCTCTAGTGATGTTAATTGGTGGATACTTAGGTGAA---------GCT------------------GGT------TTT---------------------------------ATA------------------------------------------------------------------AATTCA------------------ACTGTTGGT---TTTGTAATTGGAATGGCTGGTTGGATATTCATCTTATATGAAATT---------------TTT------GCT---GGTGAAGCTAGCAAAGTTAGTGCAGAT------AGT---GCACCTGAATCCGTA---CAA---ACA---GCC---TTT---AAC---ACAATG---AGATGGATTGTGACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQMIEFYLILAA---C-TAIAG-GV------------FWR-LFLGSLVMLIGGYLGE---A------G--F-----------I----------------------NS------TVG-FVIGMAGWIFILYEI-----F--A-GEASKVSAD--S-APESV-Q-T-A-F-N-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ929943 [IV-Proteo3-HF10_19P19] PRGD_OTU379_e3cb2efb1cfccc46f7a9a8097b6f6fb3 gb|KJ929943| PRGD_OTU379_e3cb2efb1cfccc46f7a9a8097b6f6fb3, putative proteorhodopsin gene, partial cds. PRGD_OTU379_e3cb2efb1cfccc46f7a9a8097b6f6fb3, putative proteorhodopsin gene, partial cds. KJ929943 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) ATAATTACAGTTCCACTACAAATGATTGAATTCTATTTAATTCTTGCAGCATGTACTGCAATTGCTGGTGGAGTTTTCTGGAGACTATTCCTTGGATCTCTAGTGATGTTAATTGGTGGATACTTAGGTGAAGCTGGTTTTATAAATTCAACTATTGGTTTTGTAATCGGAATGGCTGGATGGATATTCATCTTATATGAAATTTTTGCTGGTGAAGCTAGCAAAGTTAGTGCAGATAGTGCACCTGAATCCGTACAAACAGCCTTTAACACAATGAGATGGATTGTGACAATT IITVPLQMIEFYLILAACTAIAGGVFWRLFLGSLVMLIGGYLGEAGFINSTIGFVIGMAGWIFILYEIFAGEASKVSADSAPESVQTAFNTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATTACAGTTCCACTACAAATGATTGAATTCTATTTAATTCTTGCAGCA---------TGT---ACTGCAATTGCTGGT---GGAGTT------------------------------------TTCTGGAGA---CTATTCCTTGGATCTCTAGTGATGTTAATTGGTGGATACTTAGGTGAA---------GCT------------------GGT------TTT---------------------------------ATA------------------------------------------------------------------AATTCA------------------ACTATTGGT---TTTGTAATCGGAATGGCTGGATGGATATTCATCTTATATGAAATT---------------TTT------GCT---GGTGAAGCTAGCAAAGTTAGTGCAGAT------AGT---GCACCTGAATCCGTA---CAA---ACA---GCC---TTT---AAC---ACAATG---AGATGGATTGTGACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQMIEFYLILAA---C-TAIAG-GV------------FWR-LFLGSLVMLIGGYLGE---A------G--F-----------I----------------------NS------TIG-FVIGMAGWIFILYEI-----F--A-GEASKVSAD--S-APESV-Q-T-A-F-N-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ929937 [IV-Proteo3-HF10_19P19] PRGD_OTU379_6580b58dcf2760e913228ce2c78f7ce4 gb|KJ929937| PRGD_OTU379_6580b58dcf2760e913228ce2c78f7ce4, putative proteorhodopsin gene, partial cds. PRGD_OTU379_6580b58dcf2760e913228ce2c78f7ce4, putative proteorhodopsin gene, partial cds. KJ929937 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (76.3333, 14.8833), Indian Ocean (-14.48, 113.45) ATAATTACAGTTCCACTTCAAATGATTGAATTCTATTTAATCTTAGCTGCGTGTACTGCAATTGCTGGTGGTGTGTTCTGGAGGCTGTTTATCGGATCTCTAGTAATGTTAATTGGTGGATATTTAGGTGAGGCTGGATTTATAAATGCAACAGTTGGATTTGTAATCGGTATGGCTGGATGGATATTCATCCTATATGAAATTTTTGCAGGTGAAGCGAGTAAAGTTAATGCTGCCGAAGCTCCAGAATCAGTAAAAACTGCATATAATACTATGAAATGGATTGTTACAATT IITVPLQMIEFYLILAACTAIAGGVFWRLFIGSLVMLIGGYLGEAGFINATVGFVIGMAGWIFILYEIFAGEASKVNAAEAPESVKTAYNTMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATTACAGTTCCACTTCAAATGATTGAATTCTATTTAATCTTAGCTGCG---------TGT---ACTGCAATTGCTGGT---GGTGTG------------------------------------TTCTGGAGG---CTGTTTATCGGATCTCTAGTAATGTTAATTGGTGGATATTTAGGTGAG---------GCT------------------GGA------TTT---------------------------------ATA------------------------------------------------------------------AATGCA------------------ACAGTTGGA---TTTGTAATCGGTATGGCTGGATGGATATTCATCCTATATGAAATT---------------TTT------GCA---GGTGAAGCGAGTAAAGTTAATGCTGCC------GAA---GCTCCAGAATCAGTA---AAA---ACT---GCA---TAT---AAT---ACTATG---AAATGGATTGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQMIEFYLILAA---C-TAIAG-GV------------FWR-LFIGSLVMLIGGYLGE---A------G--F-----------I----------------------NA------TVG-FVIGMAGWIFILYEI-----F--A-GEASKVNAA--E-APESV-K-T-A-Y-N-TM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ929321 [IV-Proteo3-HF10_19P19] PRGD_OTU104_550fd8781b169f021149d277d7fe0d53 gb|KJ929321| PRGD_OTU104_550fd8781b169f021149d277d7fe0d53, putative proteorhodopsin gene, partial cds. PRGD_OTU104_550fd8781b169f021149d277d7fe0d53, putative proteorhodopsin gene, partial cds. KJ929321 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (72.0542, -130.8781), Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATTACAGTTCCATTACAAATGATCGAGTTCTACTTGATACTTGCAGCTTGCACTACCGTGGCTTTAGGAGTTTTTTGGAGGCTACTAGTAGGTACAGTTGTCATGCTAATGGGGGGTTACTTAGGTGAAGCTGGTTTCATCAACGTAACAACCGGATTTGTGATAGGGATGTTGGGCTGGCTATTTATCCTTTATGAAATTTTTATGGGTGAAGCTGGCAAAGTCTCTTCAGAAAATGCACCTGAGTCTGTAAAAGCCTCTTTCAATATAATGAGGTTAATCGTTACTATT LITVPLQMIEFYLILAACTTVALGVFWRLLVGTVVMLMGGYLGEAGFINVTTGFVIGMLGWLFILYEIFMGEAGKVSSENAPESVKASFNIMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACAGTTCCATTACAAATGATCGAGTTCTACTTGATACTTGCAGCT---------TGC---ACTACCGTGGCTTTA---GGAGTT------------------------------------TTTTGGAGG---CTACTAGTAGGTACAGTTGTCATGCTAATGGGGGGTTACTTAGGTGAA---------GCT------------------GGT------TTC---------------------------------ATC------------------------------------------------------------------AACGTA------------------ACAACCGGA---TTTGTGATAGGGATGTTGGGCTGGCTATTTATCCTTTATGAAATT---------------TTT------ATG---GGTGAAGCTGGCAAAGTCTCTTCAGAA------AAT---GCACCTGAGTCTGTA---AAA---GCC---TCT---TTC---AAT---ATAATG---AGGTTAATCGTTACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TTVAL-GV------------FWR-LLVGTVVMLMGGYLGE---A------G--F-----------I----------------------NV------TTG-FVIGMLGWLFILYEI-----F--M-GEAGKVSSE--N-APESV-K-A-S-F-N-IM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ929325 [IV-Proteo3-HF10_19P19] PRGD_OTU104_b241234632509d171f49cbb7b90379da gb|KJ929325| PRGD_OTU104_b241234632509d171f49cbb7b90379da, putative proteorhodopsin gene, partial cds. PRGD_OTU104_b241234632509d171f49cbb7b90379da, putative proteorhodopsin gene, partial cds. KJ929325 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTGATTACGGTTCCATTACAAATGATCGAGTTCTACTTGATTCTTGCAGCTTGCACTACCGTTGCTCTGGGAGTTTTTTGGAGGCTACTAGTAGGTACAGTCGTCATGCTGATGGGAGGTTATTTAGGTGAAGCTGGTTTCATCAACGTAACAACCGGATTTGTGATAGGAATGTTGGGCTGGCTATTTATCCTCTACGAAATATTCATGGGTGAAGCTGGCAAAGTCTCATCAGAAAATGCACCTGAGTCTGTAAAAGCTTCTTTCAATATAATGAGGTTAATCGTTACTATT LITVPLQMIEFYLILAACTTVALGVFWRLLVGTVVMLMGGYLGEAGFINVTTGFVIGMLGWLFILYEIFMGEAGKVSSENAPESVKASFNIMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACGGTTCCATTACAAATGATCGAGTTCTACTTGATTCTTGCAGCT---------TGC---ACTACCGTTGCTCTG---GGAGTT------------------------------------TTTTGGAGG---CTACTAGTAGGTACAGTCGTCATGCTGATGGGAGGTTATTTAGGTGAA---------GCT------------------GGT------TTC---------------------------------ATC------------------------------------------------------------------AACGTA------------------ACAACCGGA---TTTGTGATAGGAATGTTGGGCTGGCTATTTATCCTCTACGAAATA---------------TTC------ATG---GGTGAAGCTGGCAAAGTCTCATCAGAA------AAT---GCACCTGAGTCTGTA---AAA---GCT---TCT---TTC---AAT---ATAATG---AGGTTAATCGTTACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TTVAL-GV------------FWR-LLVGTVVMLMGGYLGE---A------G--F-----------I----------------------NV------TTG-FVIGMLGWLFILYEI-----F--M-GEAGKVSSE--N-APESV-K-A-S-F-N-IM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ929322 [IV-Proteo3-HF10_19P19] PRGD_OTU104_58bd03651fc02ba2abf3b49b5a7393bb gb|KJ929322| PRGD_OTU104_58bd03651fc02ba2abf3b49b5a7393bb, putative proteorhodopsin gene, partial cds. PRGD_OTU104_58bd03651fc02ba2abf3b49b5a7393bb, putative proteorhodopsin gene, partial cds. KJ929322 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTAATTACGGTCCCATTACAAATGATCGAGTTCTACCTGATACTTGCAGCTTGTACGGCGATTTCTTTGGGAGTTTTTTGGAGACTACTAGTAGGTACAGTTGTAATGCTAATGGGTGGTTACTTAGGTGAAGCTGGCTTCATCAATGTGACAACTGGATTTGTAATAGGGATGCTGGGTTGGCTATTCATTCTTTATGAAATATTCATGGGTGAAGCCGGGAAAGTCTCATCAGAGAACGCACCAGAGTCTGTAAAAGCCTCTTTCAATATAATGAGATTAATCGTTACTATT LITVPLQMIEFYLILAACTAISLGVFWRLLVGTVVMLMGGYLGEAGFINVTTGFVIGMLGWLFILYEIFMGEAGKVSSENAPESVKASFNIMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACGGTCCCATTACAAATGATCGAGTTCTACCTGATACTTGCAGCT---------TGT---ACGGCGATTTCTTTG---GGAGTT------------------------------------TTTTGGAGA---CTACTAGTAGGTACAGTTGTAATGCTAATGGGTGGTTACTTAGGTGAA---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AATGTG------------------ACAACTGGA---TTTGTAATAGGGATGCTGGGTTGGCTATTCATTCTTTATGAAATA---------------TTC------ATG---GGTGAAGCCGGGAAAGTCTCATCAGAG------AAC---GCACCAGAGTCTGTA---AAA---GCC---TCT---TTC---AAT---ATAATG---AGATTAATCGTTACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAISL-GV------------FWR-LLVGTVVMLMGGYLGE---A------G--F-----------I----------------------NV------TTG-FVIGMLGWLFILYEI-----F--M-GEAGKVSSE--N-APESV-K-A-S-F-N-IM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ929323 [IV-Proteo3-HF10_19P19] PRGD_OTU104_8d2c16165ca4ce8724a270e4e79ce9ec gb|KJ929323| PRGD_OTU104_8d2c16165ca4ce8724a270e4e79ce9ec, putative proteorhodopsin gene, partial cds. PRGD_OTU104_8d2c16165ca4ce8724a270e4e79ce9ec, putative proteorhodopsin gene, partial cds. KJ929323 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATTACAGTTCCATTACAAATGATCGAGTTCTACCTGATACTTGCAGCTTGTACGGCGATTTCTTTGGGAGTTTTTTGGAGACTACTCGTAGGTACAGTTGTAATGCTAATGGGTGGTTACTTAGGTGAAGCTGGCTTCATCAATGTGACAACTGGATTTGTAATAGGGATGCTGGGTTGGCTATTCATTCTTTATGAAATATTCATGGGTGAAGCTGGGAAGGTCTCATCAGAGAACGCACCAGAGTCTGTAAAAGCTTCTTTCAATATAATGAGGTTAATCGTTACTATT LITVPLQMIEFYLILAACTAISLGVFWRLLVGTVVMLMGGYLGEAGFINVTTGFVIGMLGWLFILYEIFMGEAGKVSSENAPESVKASFNIMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACAGTTCCATTACAAATGATCGAGTTCTACCTGATACTTGCAGCT---------TGT---ACGGCGATTTCTTTG---GGAGTT------------------------------------TTTTGGAGA---CTACTCGTAGGTACAGTTGTAATGCTAATGGGTGGTTACTTAGGTGAA---------GCT------------------GGC------TTC---------------------------------ATC------------------------------------------------------------------AATGTG------------------ACAACTGGA---TTTGTAATAGGGATGCTGGGTTGGCTATTCATTCTTTATGAAATA---------------TTC------ATG---GGTGAAGCTGGGAAGGTCTCATCAGAG------AAC---GCACCAGAGTCTGTA---AAA---GCT---TCT---TTC---AAT---ATAATG---AGGTTAATCGTTACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAISL-GV------------FWR-LLVGTVVMLMGGYLGE---A------G--F-----------I----------------------NV------TTG-FVIGMLGWLFILYEI-----F--M-GEAGKVSSE--N-APESV-K-A-S-F-N-IM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ929324 [IV-Proteo3-HF10_19P19] PRGD_OTU104_a54321cdbedbbed9b0c9b705e6eda4da gb|KJ929324| PRGD_OTU104_a54321cdbedbbed9b0c9b705e6eda4da, putative proteorhodopsin gene, partial cds. PRGD_OTU104_a54321cdbedbbed9b0c9b705e6eda4da, putative proteorhodopsin gene, partial cds. KJ929324 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTAATCACAGTTCCACTACAAATGATCGAGTTCTACCTGATTCTGGCAGCTTGTACTACAGTGGCTCTTGGAGTTTTTTGGAGGCTATTAGTAGGTACAGTCGTCATGCTAATGGGTGGTTATTTAGGTGAAGCTGGTTTCATCAATGTAACAACCGGATTTGTAATAGGGATGCTAGGCTGGCTATTTATTCTTTATGAAATTTTTATGGGTGAAGCTGGTAAAGTCTCATCTGAAAATGCACCTGAGTCTGTAAAAGCCTCTTTCAATATAATGAGATTAATCGTTACTATT LITVPLQMIEFYLILAACTTVALGVFWRLLVGTVVMLMGGYLGEAGFINVTTGFVIGMLGWLFILYEIFMGEAGKVSSENAPESVKASFNIMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACAGTTCCACTACAAATGATCGAGTTCTACCTGATTCTGGCAGCT---------TGT---ACTACAGTGGCTCTT---GGAGTT------------------------------------TTTTGGAGG---CTATTAGTAGGTACAGTCGTCATGCTAATGGGTGGTTATTTAGGTGAA---------GCT------------------GGT------TTC---------------------------------ATC------------------------------------------------------------------AATGTA------------------ACAACCGGA---TTTGTAATAGGGATGCTAGGCTGGCTATTTATTCTTTATGAAATT---------------TTT------ATG---GGTGAAGCTGGTAAAGTCTCATCTGAA------AAT---GCACCTGAGTCTGTA---AAA---GCC---TCT---TTC---AAT---ATAATG---AGATTAATCGTTACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TTVAL-GV------------FWR-LLVGTVVMLMGGYLGE---A------G--F-----------I----------------------NV------TTG-FVIGMLGWLFILYEI-----F--M-GEAGKVSSE--N-APESV-K-A-S-F-N-IM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-HF10_19P19]_KJ929320 [IV-Proteo3-HF10_19P19] PRGD_OTU104_otuREP_ae71c37ecdf6af84c87ae90a8318ed18 gb|KJ929320| PRGD_OTU104_otuREP_ae71c37ecdf6af84c87ae90a8318ed18, putative proteorhodopsin gene, partial cds. PRGD_OTU104_otuREP_ae71c37ecdf6af84c87ae90a8318ed18, putative proteorhodopsin gene, partial cds. KJ929320 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/HF10_19P19-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 HF10_19P19-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTAATCACTGTTCCACTTCAAATGATTGAATTTTACTTAATACTCGCAGCATGTACAGCGATCAGTCTCGGGGTTTTCTGGAGATTGTTAATCGGAACTGTTGTAATGCTAATGGGCGGATATTTAGGTGAAGCCGGTTTTATCAATGTAACAACTGGTTTTGTTATAGGGATGCTCGGCTGGCTATTTATTCTTTATGAAATTTTCATGGGCGAAGCTGGTAAAGTTTCTTCAGAAAATGCACCTGAGTCCGTTAAGTCTTCTTTCAATATCATGAGATTGATCGTAACTATT LITVPLQMIEFYLILAACTAISLGVFWRLLIGTVVMLMGGYLGEAGFINVTTGFVIGMLGWLFILYEIFMGEAGKVSSENAPESVKSSFNIMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACTGTTCCACTTCAAATGATTGAATTTTACTTAATACTCGCAGCA---------TGT---ACAGCGATCAGTCTC---GGGGTT------------------------------------TTCTGGAGA---TTGTTAATCGGAACTGTTGTAATGCTAATGGGCGGATATTTAGGTGAA---------GCC------------------GGT------TTT---------------------------------ATC------------------------------------------------------------------AATGTA------------------ACAACTGGT---TTTGTTATAGGGATGCTCGGCTGGCTATTTATTCTTTATGAAATT---------------TTC------ATG---GGCGAAGCTGGTAAAGTTTCTTCAGAA------AAT---GCACCTGAGTCCGTT---AAG---TCT---TCT---TTC---AAT---ATCATG---AGATTGATCGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---C-TAISL-GV------------FWR-LLIGTVVMLMGGYLGE---A------G--F-----------I----------------------NV------TTG-FVIGMLGWLFILYEI-----F--M-GEAGKVSSE--N-APESV-K-S-S-F-N-IM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-ARCTIC20C09]_KJ929770 [IV-Proteo3-ARCTIC20C09] PRGD_OTU237_otuREP_921caca855f69cc1dfe7a4645abde954 gb|KJ929770| PRGD_OTU237_otuREP_921caca855f69cc1dfe7a4645abde954, putative proteorhodopsin gene, partial cds. PRGD_OTU237_otuREP_921caca855f69cc1dfe7a4645abde954, putative proteorhodopsin gene, partial cds. KJ929770 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/ARCTIC20C09 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 ARCTIC20C09 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) CTGATTACTGTTCCACTTCAAATGATCGAATTCTATTTGATACTCGCTGCAGTAGGGGCAGCCACCAGCCGAATTTTCTGGCATTTGCTAGTTGGCACGCTGGTCATGTTACTGGGTGGTTATTTCGGCGAGATTGGAGTAATCGACGCGACCCTCGGCTTTATTATTGGCATGGCTGGCTGGGTATATATCCTTTACTTTATCTTTGCCGGCGAAGCTGGTCAAAACGTAAAGAGCACTTCGCCTGCTGTACAAAGTGCCTTTAGCGCCATGCGTCTCATTGTATTGGTA LITVPLQMIEFYLILAAVGAATSRIFWHLLVGTLVMLLGGYFGEIGVIDATLGFIIGMAGWVYILYFIFAGEAGQNVKSTSPAVQSAFSAMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTTCCACTTCAAATGATCGAATTCTATTTGATACTCGCTGCA---------GTA---GGGGCAGCCACCAGC---CGAATT------------------------------------TTCTGGCAT---TTGCTAGTTGGCACGCTGGTCATGTTACTGGGTGGTTATTTCGGCGAG---------ATT------------------GGA------GTA---------------------------------ATC------------------------------------------------------------------GACGCG------------------ACCCTCGGC---TTTATTATTGGCATGGCTGGCTGGGTATATATCCTTTACTTTATC---------------TTT------GCC---GGCGAAGCTGGTCAA---AACGTAAAG------AGC---ACTTCGCCTGCTGTA---CAA---AGT---GCC---TTT---AGC---GCCATG---CGTCTCATTGTATTGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-GAATS-RI------------FWH-LLVGTLVMLLGGYFGE---I------G--V-----------I----------------------DA------TLG-FIIGMAGWVYILYFI-----F--A-GEAGQ-NVK--S-TSPAV-Q-S-A-F-S-AM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-ARCTIC20C09]_KJ929771 [IV-Proteo3-ARCTIC20C09] PRGD_OTU237_c060725245335352d3424f97aecc609e gb|KJ929771| PRGD_OTU237_c060725245335352d3424f97aecc609e, putative proteorhodopsin gene, partial cds. PRGD_OTU237_c060725245335352d3424f97aecc609e, putative proteorhodopsin gene, partial cds. KJ929771 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/ARCTIC20C09 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 ARCTIC20C09 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTAATTACTGTGCCTCTTCAAATGGTAGAATTCTATTTGATACTTTTTGCTGTGGGTGCAGCTACCAGCCGGATTTTCTGGCACTTGCTCGTCGGCACACTTGTAATGCTGCTCGGCGGATACTTCGGTGAAATCGGTGTAGTAGATGCAACACTGGGCTTCATCGTCGGAATGGTGGGCTGGGTATATATCCTGTACTTCATTTTTGCTGGCGAAGCTGGCCAAAAAGCTGCCGCCGCAGGCGGAGCCGTGGCAAGTGCATTCAGCACCATGCGCTTGATTGTCCTAGTT LITVPLQMVEFYLILFAVGAATSRIFWHLLVGTLVMLLGGYFGEIGVVDATLGFIVGMVGWVYILYFIFAGEAGQKAAAAGGAVASAFSTMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTGCCTCTTCAAATGGTAGAATTCTATTTGATACTTTTTGCT---------GTG---GGTGCAGCTACCAGC---CGGATT------------------------------------TTCTGGCAC---TTGCTCGTCGGCACACTTGTAATGCTGCTCGGCGGATACTTCGGTGAA---------ATC------------------GGT------GTA---------------------------------GTA------------------------------------------------------------------GATGCA------------------ACACTGGGC---TTCATCGTCGGAATGGTGGGCTGGGTATATATCCTGTACTTCATT---------------TTT------GCT---GGCGAAGCTGGCCAA---AAAGCTGCC------GCC---GCAGGCGGAGCCGTG---GCA---AGT---GCA---TTC---AGC---ACCATG---CGCTTGATTGTCCTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILFA---V-GAATS-RI------------FWH-LLVGTLVMLLGGYFGE---I------G--V-----------V----------------------DA------TLG-FIVGMVGWVYILYFI-----F--A-GEAGQ-KAA--A-AGGAV-A-S-A-F-S-TM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-ARCTIC20C09]_KJ929871 [IV-Proteo3-ARCTIC20C09] PRGD_OTU322_otuREP_19b23fa168274400401f60f1a832e386 gb|KJ929871| PRGD_OTU322_otuREP_19b23fa168274400401f60f1a832e386, putative proteorhodopsin gene, partial cds. PRGD_OTU322_otuREP_19b23fa168274400401f60f1a832e386, putative proteorhodopsin gene, partial cds. KJ929871 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/ARCTIC20C09 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 ARCTIC20C09 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTGATCACCGTGCCACTGCAGATGATCGAATTCTACCTGATTTTGGCTGCCGTTGGCGTAGCTGCAGGACGCATTTTCTGGCACCTGCTTATCGGTACGCTGGTCATGCTGTTGGGTGGCTACTTCGGCGAAGTCGGCCTGATCGACGCAACGCTGGGCTTCATCATCGGGATGCTGGGCTGGGTATATATCCTGTACTACATCTTCTCGGGCGAAGCTGCTCAGAGCGCGAAAAACGCTCCGGCAAGCGTACAATCTGCCTTCAGCACAATGCGTCTTATCGTGCTCGTT LITVPLQMIEFYLILAAVGVAAGRIFWHLLIGTLVMLLGGYFGEVGLIDATLGFIIGMLGWVYILYYIFSGEAAQSAKNAPASVQSAFSTMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTGCCACTGCAGATGATCGAATTCTACCTGATTTTGGCTGCC---------GTT---GGCGTAGCTGCAGGA---CGCATT------------------------------------TTCTGGCAC---CTGCTTATCGGTACGCTGGTCATGCTGTTGGGTGGCTACTTCGGCGAA---------GTC------------------GGC------CTG---------------------------------ATC------------------------------------------------------------------GACGCA------------------ACGCTGGGC---TTCATCATCGGGATGCTGGGCTGGGTATATATCCTGTACTACATC---------------TTC------TCG---GGCGAAGCTGCTCAG---AGCGCGAAA------AAC---GCTCCGGCAAGCGTA---CAA---TCT---GCC---TTC---AGC---ACAATG---CGTCTTATCGTGCTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-GVAAG-RI------------FWH-LLIGTLVMLLGGYFGE---V------G--L-----------I----------------------DA------TLG-FIIGMLGWVYILYYI-----F--S-GEAAQ-SAK--N-APASV-Q-S-A-F-S-TM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-ARCTIC20C09]_KJ929167 [IV-Proteo3-ARCTIC20C09] PRGD_OTU083_1beef0fa0aa8534a5e51a92330c59251 gb|KJ929167| PRGD_OTU083_1beef0fa0aa8534a5e51a92330c59251, putative proteorhodopsin gene, partial cds. PRGD_OTU083_1beef0fa0aa8534a5e51a92330c59251, putative proteorhodopsin gene, partial cds. KJ929167 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/ARCTIC20C09 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 ARCTIC20C09 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (72.0542, -130.8781), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) ATTCTTACAGTGCCACTACAAATGGTTGAGTTTTACTTGATCTTGGCTGCTGTTGGCGTCGTTGCTGGAAGAGTATTCTGGCATCTTCTAATTGGTACCCTAATAATGCTTCTTGGTGGTTACTTCGGCGAAACAGGTGTACTTACTCCTGTAGTTGGTTTTGTTGTTGGTATGGCAGGTTGGATATACATCCTGTATTACATCTTCTCTGGTGAAGCTGCTAAATCTGCCGAAAATGCTCCTGCAGCTGTTCAATCCGCCTTTAATACTATGAGACTTATTGTACTAGTA ILTVPLQMVEFYLILAAVGVVAGRVFWHLLIGTLIMLLGGYFGETGVLTPVVGFVVGMAGWIYILYYIFSGEAAKSAENAPAAVQSAFNTMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTACAGTGCCACTACAAATGGTTGAGTTTTACTTGATCTTGGCTGCT---------GTT---GGCGTCGTTGCTGGA---AGAGTA------------------------------------TTCTGGCAT---CTTCTAATTGGTACCCTAATAATGCTTCTTGGTGGTTACTTCGGCGAA---------ACA------------------GGT------GTA---------------------------------CTT------------------------------------------------------------------ACTCCT------------------GTAGTTGGT---TTTGTTGTTGGTATGGCAGGTTGGATATACATCCTGTATTACATC---------------TTC------TCT---GGTGAAGCTGCTAAA---TCTGCCGAA------AAT---GCTCCTGCAGCTGTT---CAA---TCC---GCC---TTT---AAT---ACTATG---AGACTTATTGTACTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLQMVEFYLILAA---V-GVVAG-RV------------FWH-LLIGTLIMLLGGYFGE---T------G--V-----------L----------------------TP------VVG-FVVGMAGWIYILYYI-----F--S-GEAAK-SAE--N-APAAV-Q-S-A-F-N-TM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-ARCTIC20C09]_KJ929166 [IV-Proteo3-ARCTIC20C09] PRGD_OTU083_1ace998c67e837df8bd914fb5e5afddc gb|KJ929166| PRGD_OTU083_1ace998c67e837df8bd914fb5e5afddc, putative proteorhodopsin gene, partial cds. PRGD_OTU083_1ace998c67e837df8bd914fb5e5afddc, putative proteorhodopsin gene, partial cds. KJ929166 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/ARCTIC20C09 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 ARCTIC20C09 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) ATTCTTACAGTGCCACTACAAATGGTTGAGTTTTACTTGATCTTGGCTGCTGTTGGCGTCGTTGCTGGAAGAGTATTCTGGCATCTTCTTATTGGTACCCTAATAATGCTTCTTGGTGGTTACTTCGGCGAAACAGGTGTACTTACTCCTGTAGTTGGTTTTGTTGTTGGTATGGCAGGTTGGATATACATCCTGTATTACATCTTCTCTGGTGAAGCTGCAAAATCTGCCGAAAATGCTCCTGCAGCTGTTCAATCCGCCTTTAATACTATGAGACTTATTGTACTTGTA ILTVPLQMVEFYLILAAVGVVAGRVFWHLLIGTLIMLLGGYFGETGVLTPVVGFVVGMAGWIYILYYIFSGEAAKSAENAPAAVQSAFNTMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTACAGTGCCACTACAAATGGTTGAGTTTTACTTGATCTTGGCTGCT---------GTT---GGCGTCGTTGCTGGA---AGAGTA------------------------------------TTCTGGCAT---CTTCTTATTGGTACCCTAATAATGCTTCTTGGTGGTTACTTCGGCGAA---------ACA------------------GGT------GTA---------------------------------CTT------------------------------------------------------------------ACTCCT------------------GTAGTTGGT---TTTGTTGTTGGTATGGCAGGTTGGATATACATCCTGTATTACATC---------------TTC------TCT---GGTGAAGCTGCAAAA---TCTGCCGAA------AAT---GCTCCTGCAGCTGTT---CAA---TCC---GCC---TTT---AAT---ACTATG---AGACTTATTGTACTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLQMVEFYLILAA---V-GVVAG-RV------------FWH-LLIGTLIMLLGGYFGE---T------G--V-----------L----------------------TP------VVG-FVVGMAGWIYILYYI-----F--S-GEAAK-SAE--N-APAAV-Q-S-A-F-N-TM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-ARCTIC20C09]_KJ929172 [IV-Proteo3-ARCTIC20C09] PRGD_OTU083_92f3c252b8f8ef8e5fcc54d6b7c933d9 gb|KJ929172| PRGD_OTU083_92f3c252b8f8ef8e5fcc54d6b7c933d9, putative proteorhodopsin gene, partial cds. PRGD_OTU083_92f3c252b8f8ef8e5fcc54d6b7c933d9, putative proteorhodopsin gene, partial cds. KJ929172 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/ARCTIC20C09 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 ARCTIC20C09 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-14.48, 113.45; -33.28, 45.35) ATTCTTACAGTGCCACTACAAATGGTTGAATTTTACTTGATCTTGGCTGCTGTTGGCGTCGTTGCAGGAAGAGTATTCTGGCATCTTCTAATTGGTACCCTAATAATGCTTCTCGGTGGTTATTTCGGCGAAACAGGTGTTCTTACTCCTGTAGTTGGTTTTGTTGTTGGTATGGCAGGTTGGATATACATCCTGTATTACATCTTCTCTGGTGAAGCTGCTAAATCTGCTGAGAATGCTCCTGCAGCTGTTCAATCAGCCTTTAATACTATGAGACTAATTGTACTTGTA ILTVPLQMVEFYLILAAVGVVAGRVFWHLLIGTLIMLLGGYFGETGVLTPVVGFVVGMAGWIYILYYIFSGEAAKSAENAPAAVQSAFNTMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTACAGTGCCACTACAAATGGTTGAATTTTACTTGATCTTGGCTGCT---------GTT---GGCGTCGTTGCAGGA---AGAGTA------------------------------------TTCTGGCAT---CTTCTAATTGGTACCCTAATAATGCTTCTCGGTGGTTATTTCGGCGAA---------ACA------------------GGT------GTT---------------------------------CTT------------------------------------------------------------------ACTCCT------------------GTAGTTGGT---TTTGTTGTTGGTATGGCAGGTTGGATATACATCCTGTATTACATC---------------TTC------TCT---GGTGAAGCTGCTAAA---TCTGCTGAG------AAT---GCTCCTGCAGCTGTT---CAA---TCA---GCC---TTT---AAT---ACTATG---AGACTAATTGTACTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLQMVEFYLILAA---V-GVVAG-RV------------FWH-LLIGTLIMLLGGYFGE---T------G--V-----------L----------------------TP------VVG-FVVGMAGWIYILYYI-----F--S-GEAAK-SAE--N-APAAV-Q-S-A-F-N-TM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-ARCTIC20C09]_KJ929168 [IV-Proteo3-ARCTIC20C09] PRGD_OTU083_3c1aeff1764c336151d49c6c69d94c23 gb|KJ929168| PRGD_OTU083_3c1aeff1764c336151d49c6c69d94c23, putative proteorhodopsin gene, partial cds. PRGD_OTU083_3c1aeff1764c336151d49c6c69d94c23, putative proteorhodopsin gene, partial cds. KJ929168 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/ARCTIC20C09 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 ARCTIC20C09 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATACTCACAGTACCGCTTCAGATGGTTGAGTTTTATTTGATCTTAGCTGCTGTTGGCGTTGTTGCAGGAAGAGTATTCTGGCATCTTCTTATTGGTACACTAATCATGCTTCTTGGCGGTTACTTCGGTGAAACAGGTGTGCTTACCCCTGTGGTAGGTTTTGTTATCGGTATGGCCGGTTGGATATACATCCTATACTACATCTTCTCAGGTGAAGCAGCTAAATCTGCTGAAAGTGCACCTGCAGCTGTTCAATCTGCATTTAACACCATGAGACTAATTGTCCTCGTA ILTVPLQMVEFYLILAAVGVVAGRVFWHLLIGTLIMLLGGYFGETGVLTPVVGFVIGMAGWIYILYYIFSGEAAKSAESAPAAVQSAFNTMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTCACAGTACCGCTTCAGATGGTTGAGTTTTATTTGATCTTAGCTGCT---------GTT---GGCGTTGTTGCAGGA---AGAGTA------------------------------------TTCTGGCAT---CTTCTTATTGGTACACTAATCATGCTTCTTGGCGGTTACTTCGGTGAA---------ACA------------------GGT------GTG---------------------------------CTT------------------------------------------------------------------ACCCCT------------------GTGGTAGGT---TTTGTTATCGGTATGGCCGGTTGGATATACATCCTATACTACATC---------------TTC------TCA---GGTGAAGCAGCTAAA---TCTGCTGAA------AGT---GCACCTGCAGCTGTT---CAA---TCT---GCA---TTT---AAC---ACCATG---AGACTAATTGTCCTCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLQMVEFYLILAA---V-GVVAG-RV------------FWH-LLIGTLIMLLGGYFGE---T------G--V-----------L----------------------TP------VVG-FVIGMAGWIYILYYI-----F--S-GEAAK-SAE--S-APAAV-Q-S-A-F-N-TM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-ARCTIC20C09]_KJ929171 [IV-Proteo3-ARCTIC20C09] PRGD_OTU083_7ec4e01b8e36a8d05a006912b73ff0f3 gb|KJ929171| PRGD_OTU083_7ec4e01b8e36a8d05a006912b73ff0f3, putative proteorhodopsin gene, partial cds. PRGD_OTU083_7ec4e01b8e36a8d05a006912b73ff0f3, putative proteorhodopsin gene, partial cds. KJ929171 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/ARCTIC20C09 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 ARCTIC20C09 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) ATACTCACAGTACCGCTTCAGATGGTTGAGTTTTATTTGATCTTAGCTGCTGTTGGCGTTGTTGCAGGAAGAGTATTCTGGCATCTTCTTATTGGTACACTAATCATGCTTCTTGGTGGTTACTTCGGTGAAACAGGTGTGCTTACTCCTGTGGTCGGTTTTGTTATCGGTATGGCCGGTTGGATATACATCTTATACTACATCTTCTCAGGTGAAGCAGCTAAATCTGCTGAAAGTGCACCTGCAGCTGTTCAATCTGCATTTAACACCATGAGACTCATTGTCCTCGTA ILTVPLQMVEFYLILAAVGVVAGRVFWHLLIGTLIMLLGGYFGETGVLTPVVGFVIGMAGWIYILYYIFSGEAAKSAESAPAAVQSAFNTMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTCACAGTACCGCTTCAGATGGTTGAGTTTTATTTGATCTTAGCTGCT---------GTT---GGCGTTGTTGCAGGA---AGAGTA------------------------------------TTCTGGCAT---CTTCTTATTGGTACACTAATCATGCTTCTTGGTGGTTACTTCGGTGAA---------ACA------------------GGT------GTG---------------------------------CTT------------------------------------------------------------------ACTCCT------------------GTGGTCGGT---TTTGTTATCGGTATGGCCGGTTGGATATACATCTTATACTACATC---------------TTC------TCA---GGTGAAGCAGCTAAA---TCTGCTGAA------AGT---GCACCTGCAGCTGTT---CAA---TCT---GCA---TTT---AAC---ACCATG---AGACTCATTGTCCTCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLQMVEFYLILAA---V-GVVAG-RV------------FWH-LLIGTLIMLLGGYFGE---T------G--V-----------L----------------------TP------VVG-FVIGMAGWIYILYYI-----F--S-GEAAK-SAE--S-APAAV-Q-S-A-F-N-TM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-ARCTIC20C09]_KJ929170 [IV-Proteo3-ARCTIC20C09] PRGD_OTU083_6fc7725c961964a9fc492d85bb203d8f gb|KJ929170| PRGD_OTU083_6fc7725c961964a9fc492d85bb203d8f, putative proteorhodopsin gene, partial cds. PRGD_OTU083_6fc7725c961964a9fc492d85bb203d8f, putative proteorhodopsin gene, partial cds. KJ929170 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/ARCTIC20C09 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 ARCTIC20C09 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTCTTACAGTGCCACTACAGATGGTTGAGTTTTATTTGATCTTGGCTGCTGTTGGAGTTGTTGCAGGAAGAGTATTCTGGCATCTTCTTATTGGTACACTAATCATGCTTCTTGGTGGTTACTTCGGTGAAACAGGTGTGCTTACTCCTGTGGTCGGTTTTGTTATCGGTATGGCCGGTTGGATATACATCCTGTATTACATCTTCTCTGGTGAAGCTGCTAAATCTGCTCAGAATGCTCCTGCAGCTGTTCAATCAGCCTTTAATACTATGAGACTAATTGTACTTGTA ILTVPLQMVEFYLILAAVGVVAGRVFWHLLIGTLIMLLGGYFGETGVLTPVVGFVIGMAGWIYILYYIFSGEAAKSAQNAPAAVQSAFNTMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTACAGTGCCACTACAGATGGTTGAGTTTTATTTGATCTTGGCTGCT---------GTT---GGAGTTGTTGCAGGA---AGAGTA------------------------------------TTCTGGCAT---CTTCTTATTGGTACACTAATCATGCTTCTTGGTGGTTACTTCGGTGAA---------ACA------------------GGT------GTG---------------------------------CTT------------------------------------------------------------------ACTCCT------------------GTGGTCGGT---TTTGTTATCGGTATGGCCGGTTGGATATACATCCTGTATTACATC---------------TTC------TCT---GGTGAAGCTGCTAAA---TCTGCTCAG------AAT---GCTCCTGCAGCTGTT---CAA---TCA---GCC---TTT---AAT---ACTATG---AGACTAATTGTACTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLQMVEFYLILAA---V-GVVAG-RV------------FWH-LLIGTLIMLLGGYFGE---T------G--V-----------L----------------------TP------VVG-FVIGMAGWIYILYYI-----F--S-GEAAK-SAQ--N-APAAV-Q-S-A-F-N-TM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-ARCTIC20C09]_KJ929169 [IV-Proteo3-ARCTIC20C09] PRGD_OTU083_524b8072db342af3c2d3c5f2fa055ec8 gb|KJ929169| PRGD_OTU083_524b8072db342af3c2d3c5f2fa055ec8, putative proteorhodopsin gene, partial cds. PRGD_OTU083_524b8072db342af3c2d3c5f2fa055ec8, putative proteorhodopsin gene, partial cds. KJ929169 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/ARCTIC20C09 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 ARCTIC20C09 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) ATTCTCACAGTGCCATTACAAATGGTTGAATTTTACTTGATCTTGGCTGCTGTTGGCGTCGTTGCAGGAAGAGTATTCTGGCATCTACTTATTGGTACCCTAATAATGCTTCTTGGTGGTTACTTCGGTGAAACAGGTGTACTTACTCCTGTAGTTGGTTTTGTTATTGGTATGGCAGGTTGGATATACATCCTGTATTACATCTTCTCTGGTGAAGCTGCTAAATCTGCTGAAAATGCTCCTGCAGCTGTTCAATCAGCCTTTAATACTATGAGACTTATTGTACTTGTA ILTVPLQMVEFYLILAAVGVVAGRVFWHLLIGTLIMLLGGYFGETGVLTPVVGFVIGMAGWIYILYYIFSGEAAKSAENAPAAVQSAFNTMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTCACAGTGCCATTACAAATGGTTGAATTTTACTTGATCTTGGCTGCT---------GTT---GGCGTCGTTGCAGGA---AGAGTA------------------------------------TTCTGGCAT---CTACTTATTGGTACCCTAATAATGCTTCTTGGTGGTTACTTCGGTGAA---------ACA------------------GGT------GTA---------------------------------CTT------------------------------------------------------------------ACTCCT------------------GTAGTTGGT---TTTGTTATTGGTATGGCAGGTTGGATATACATCCTGTATTACATC---------------TTC------TCT---GGTGAAGCTGCTAAA---TCTGCTGAA------AAT---GCTCCTGCAGCTGTT---CAA---TCA---GCC---TTT---AAT---ACTATG---AGACTTATTGTACTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLQMVEFYLILAA---V-GVVAG-RV------------FWH-LLIGTLIMLLGGYFGE---T------G--V-----------L----------------------TP------VVG-FVIGMAGWIYILYYI-----F--S-GEAAK-SAE--N-APAAV-Q-S-A-F-N-TM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-ARCTIC20C09]_KJ929165 [IV-Proteo3-ARCTIC20C09] PRGD_OTU083_otuREP_b9b66a9de21f324949bdd019a4a64999 gb|KJ929165| PRGD_OTU083_otuREP_b9b66a9de21f324949bdd019a4a64999, putative proteorhodopsin gene, partial cds. PRGD_OTU083_otuREP_b9b66a9de21f324949bdd019a4a64999, putative proteorhodopsin gene, partial cds. KJ929165 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/ARCTIC20C09 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 ARCTIC20C09 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) GTTCTCACTGTACCTCTTCAAATGGTAGAGTTTTACTTAATCCTTGCGGCAGTCGGTATGGTTGCTGGTCGAGTGTTCTGGCATCTACTTATTGGTACCCTTATAATGCTTCTAGGTGGTTACTTTGGTGAAATAGGTGTACTTGCCCCTGTTGTCGGTTTTGTAATCGGCATGGCAGGTTGGTTATACATTCTTTATTACATCTTCTCTGGTGAAGCAGCTAAATCGGCTGAAAGTGCGCCGGCAGCTGTGCAGTCAGCCTTCAAAGCTATGCGACTAATTGTTCTTGTA VLTVPLQMVEFYLILAAVGMVAGRVFWHLLIGTLIMLLGGYFGEIGVLAPVVGFVIGMAGWLYILYYIFSGEAAKSAESAPAAVQSAFKAMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTCTCACTGTACCTCTTCAAATGGTAGAGTTTTACTTAATCCTTGCGGCA---------GTC---GGTATGGTTGCTGGT---CGAGTG------------------------------------TTCTGGCAT---CTACTTATTGGTACCCTTATAATGCTTCTAGGTGGTTACTTTGGTGAA---------ATA------------------GGT------GTA---------------------------------CTT------------------------------------------------------------------GCCCCT------------------GTTGTCGGT---TTTGTAATCGGCATGGCAGGTTGGTTATACATTCTTTATTACATC---------------TTC------TCT---GGTGAAGCAGCTAAA---TCGGCTGAA------AGT---GCGCCGGCAGCTGTG---CAG---TCA---GCC---TTC---AAA---GCTATG---CGACTAATTGTTCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLQMVEFYLILAA---V-GMVAG-RV------------FWH-LLIGTLIMLLGGYFGE---I------G--V-----------L----------------------AP------VVG-FVIGMAGWLYILYYI-----F--S-GEAAK-SAE--S-APAAV-Q-S-A-F-K-AM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-ARCTIC20C09]_KJ929173 [IV-Proteo3-ARCTIC20C09] PRGD_OTU083_c49c728d4526e850ef40d7752492a78e gb|KJ929173| PRGD_OTU083_c49c728d4526e850ef40d7752492a78e, putative proteorhodopsin gene, partial cds. PRGD_OTU083_c49c728d4526e850ef40d7752492a78e, putative proteorhodopsin gene, partial cds. KJ929173 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/ARCTIC20C09 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 ARCTIC20C09 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Indian Ocean (-14.48, 113.45; -33.28, 45.35) GTTCTCACTGTACCTCTTCAAATGGTAGAGTTTTACTTAATCCTTGCGGCAGTCGGTATGGTTGCTGGTCGAGTGTTCTGGCATCTACTTATTGGTACCCTTATAATGCTTCTAGGTGGTTACTTTGGTGAAATAGGTGTACTTACCCCTGTTGTCGGTTTTGTAATCGGCATGGCAGGTTGGTTATACATTCTTTATTACATCTTCTCTGGTGAAGCAGCTAAATCGGCTGAAAGTGCGCCGGCAGCTGTGCAGTCAGCCTTCAATGCTATGCGACTAATTGTTCTTGTA VLTVPLQMVEFYLILAAVGMVAGRVFWHLLIGTLIMLLGGYFGEIGVLTPVVGFVIGMAGWLYILYYIFSGEAAKSAESAPAAVQSAFNAMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTCTCACTGTACCTCTTCAAATGGTAGAGTTTTACTTAATCCTTGCGGCA---------GTC---GGTATGGTTGCTGGT---CGAGTG------------------------------------TTCTGGCAT---CTACTTATTGGTACCCTTATAATGCTTCTAGGTGGTTACTTTGGTGAA---------ATA------------------GGT------GTA---------------------------------CTT------------------------------------------------------------------ACCCCT------------------GTTGTCGGT---TTTGTAATCGGCATGGCAGGTTGGTTATACATTCTTTATTACATC---------------TTC------TCT---GGTGAAGCAGCTAAA---TCGGCTGAA------AGT---GCGCCGGCAGCTGTG---CAG---TCA---GCC---TTC---AAT---GCTATG---CGACTAATTGTTCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLQMVEFYLILAA---V-GMVAG-RV------------FWH-LLIGTLIMLLGGYFGE---I------G--V-----------L----------------------TP------VVG-FVIGMAGWLYILYYI-----F--S-GEAAK-SAE--S-APAAV-Q-S-A-F-N-AM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-ARCTIC20C09]_KJ929900 [IV-Proteo3-ARCTIC20C09] PRGD_OTU351_otuREP_5d05c818a11d8a959438eed8b5b96bfc gb|KJ929900| PRGD_OTU351_otuREP_5d05c818a11d8a959438eed8b5b96bfc, putative proteorhodopsin gene, partial cds. PRGD_OTU351_otuREP_5d05c818a11d8a959438eed8b5b96bfc, putative proteorhodopsin gene, partial cds. KJ929900 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/ARCTIC20C09 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 ARCTIC20C09 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTGATAACTGTCCCTCTTTTAATGGTCGAATTTTACTTCATACTAGCCGCTGTCGGTTTAGCTACGATGAAAGTCTTTTGGAATCTCCTAATTGGAACATTGGTCATGTTATTGGGAGGTTACTGTGGTGAAGTTGGTATTATCAATCCTAGCGCTGGTTTCATAATCGGAATGGCCGGTTGGTTCTATATTCTTTATTATATTTTTGCAGGCGATGCAGGAAAAGCGATGGCTAATGCGTCCGAAGCTGTTCAGACTGCGTTTAAAACAATGCGTATGATTGTTCTCATT LITVPLLMVEFYFILAAVGLATMKVFWNLLIGTLVMLLGGYCGEVGIINPSAGFIIGMAGWFYILYYIFAGDAGKAMANASEAVQTAFKTMRMIVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACTGTCCCTCTTTTAATGGTCGAATTTTACTTCATACTAGCCGCT---------GTC---GGTTTAGCTACGATG---AAAGTC------------------------------------TTTTGGAAT---CTCCTAATTGGAACATTGGTCATGTTATTGGGAGGTTACTGTGGTGAA---------GTT------------------GGT------ATT---------------------------------ATC------------------------------------------------------------------AATCCT------------------AGCGCTGGT---TTCATAATCGGAATGGCCGGTTGGTTCTATATTCTTTATTATATT---------------TTT------GCA---GGCGATGCAGGAAAA---GCGATGGCT------AAT---GCGTCCGAAGCTGTT---CAG---ACT---GCG---TTT---AAA---ACAATG---CGTATGATTGTTCTCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYFILAA---V-GLATM-KV------------FWN-LLIGTLVMLLGGYCGE---V------G--I-----------I----------------------NP------SAG-FIIGMAGWFYILYYI-----F--A-GDAGK-AMA--N-ASEAV-Q-T-A-F-K-TM-RMIVLI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-ARCTIC20C09]_KJ929880 [IV-Proteo3-ARCTIC20C09] PRGD_OTU331_otuREP_88fbf42beb14085a2ad021ab5ad879cc gb|KJ929880| PRGD_OTU331_otuREP_88fbf42beb14085a2ad021ab5ad879cc, putative proteorhodopsin gene, partial cds. PRGD_OTU331_otuREP_88fbf42beb14085a2ad021ab5ad879cc, putative proteorhodopsin gene, partial cds. KJ929880 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/ARCTIC20C09 Alphaproteobacterial-like subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 ARCTIC20C09 Alphaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (33.935, 18.508), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTGATTACTGTTCCACTTTTGATGGTTGAATTTTATTTTATCCTTGCCGCCGTTGGTCTAGCGACAATTAAGGTTTTTTGGAACCTCTTAATTGGCACTTTAGTAATGTTAGTTGGTGGTTACCTTGGAGAAGTTGGAGCAATTGATTCGACAGTTGGCTTTGTAATTGGAATGATTGGTTGGTTGTATATCCTTTATTATATCTTTGCTGGTGACGCAGGGACGGCAATGGGTAATGCATCTGAAGGCGTTCAGTCAGCGTTTAAGGCTATGCGCTTAATCGTTTTAATT LITVPLLMVEFYFILAAVGLATIKVFWNLLIGTLVMLVGGYLGEVGAIDSTVGFVIGMIGWLYILYYIFAGDAGTAMGNASEGVQSAFKAMRLIVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTTCCACTTTTGATGGTTGAATTTTATTTTATCCTTGCCGCC---------GTT---GGTCTAGCGACAATT---AAGGTT------------------------------------TTTTGGAAC---CTCTTAATTGGCACTTTAGTAATGTTAGTTGGTGGTTACCTTGGAGAA---------GTT------------------GGA------GCA---------------------------------ATT------------------------------------------------------------------GATTCG------------------ACAGTTGGC---TTTGTAATTGGAATGATTGGTTGGTTGTATATCCTTTATTATATC---------------TTT------GCT---GGTGACGCAGGGACG---GCAATGGGT------AAT---GCATCTGAAGGCGTT---CAG---TCA---GCG---TTT---AAG---GCTATG---CGCTTAATCGTTTTAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYFILAA---V-GLATI-KV------------FWN-LLIGTLVMLVGGYLGE---V------G--A-----------I----------------------DS------TVG-FVIGMIGWLYILYYI-----F--A-GDAGT-AMG--N-ASEGV-Q-S-A-F-K-AM-RLIVLI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927623 [IV-Proteo3-b] PRGD_OTU013_0b975f35b2171cf3e4b47588e9f0ea0b gb|KJ927623| PRGD_OTU013_0b975f35b2171cf3e4b47588e9f0ea0b, putative proteorhodopsin gene, partial cds. PRGD_OTU013_0b975f35b2171cf3e4b47588e9f0ea0b, putative proteorhodopsin gene, partial cds. KJ927623 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Arctic Ocean-Atlantic side (73.9992, 19.2097), Indian Ocean (-23.5956, 69.0419) TTGATCACAGTGCCACTGCAAATGGTTGAGTTTTATCTCATCCTTGCTGCTGTCGGTGTTGCATCTGCCGGGATATTCTGGCGTCTGTTGGTAGGTTCAATCGTCATGCTTCTTGGCGGCTATGCTGGGGAAGTTGGGGCTATAAATGCCTGGGTTGGATTTATTATCGGAATGGCGGGCTGGTTATACATCCTGTACGAGATTTTTGCAGGGGAGGCAGGCAAAGCTTCCGCTGAAAAAGCGCCAGAATCAGTAAAATCCGCATTCAGTGCAATGCGCTTAATCGTAACAGTC LITVPLQMVEFYLILAAVGVASAGIFWRLLVGSIVMLLGGYAGEVGAINAWVGFIIGMAGWLYILYEIFAGEAGKASAEKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCACTGCAAATGGTTGAGTTTTATCTCATCCTTGCTGCT---------GTC---GGTGTTGCATCTGCC---GGGATA------------------------------------TTCTGGCGT---CTGTTGGTAGGTTCAATCGTCATGCTTCTTGGCGGCTATGCTGGGGAA---------GTT------------------GGG------GCT---------------------------------ATA------------------------------------------------------------------AATGCC------------------TGGGTTGGA---TTTATTATCGGAATGGCGGGCTGGTTATACATCCTGTACGAGATT---------------TTT------GCA---GGGGAGGCAGGCAAAGCTTCCGCTGAA------AAA---GCGCCAGAATCAGTA---AAA---TCC---GCA---TTC---AGT---GCAATG---CGCTTAATCGTAACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GVASA-GI------------FWR-LLVGSIVMLLGGYAGE---V------G--A-----------I----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAE--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927643 [IV-Proteo3-b] PRGD_OTU013_684193094e7fa32bc4fd3625854368ae gb|KJ927643| PRGD_OTU013_684193094e7fa32bc4fd3625854368ae, putative proteorhodopsin gene, partial cds. PRGD_OTU013_684193094e7fa32bc4fd3625854368ae, putative proteorhodopsin gene, partial cds. KJ927643 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATTACAGTGCCACTGCAAATGGTTGAGTTTTATCTCATCCTTGCTGCTGTTGGTGTTGCATCTGCTGGGATATTCTGGCGTCTGTTGCTAGGTTCAATCGTGATGCTTCTCGGCGGCTATGCTGGGGAAGTCGGGGCTCTAAATGCCTGGGTTGGATTTATTATCGGAATGGCAGGCTGGTTATACATCCTGTACGAGATTTTTGCAGGGGAGGCAGGTAAAGCTTCCGCTGAAAAAGCGCCAGAGTCAGTAAAATCCGCATTCAGTGCAATGCGTTTAATCGTAACAGTC LITVPLQMVEFYLILAAVGVASAGIFWRLLLGSIVMLLGGYAGEVGALNAWVGFIIGMAGWLYILYEIFAGEAGKASAEKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACAGTGCCACTGCAAATGGTTGAGTTTTATCTCATCCTTGCTGCT---------GTT---GGTGTTGCATCTGCT---GGGATA------------------------------------TTCTGGCGT---CTGTTGCTAGGTTCAATCGTGATGCTTCTCGGCGGCTATGCTGGGGAA---------GTC------------------GGG------GCT---------------------------------CTA------------------------------------------------------------------AATGCC------------------TGGGTTGGA---TTTATTATCGGAATGGCAGGCTGGTTATACATCCTGTACGAGATT---------------TTT------GCA---GGGGAGGCAGGTAAAGCTTCCGCTGAA------AAA---GCGCCAGAGTCAGTA---AAA---TCC---GCA---TTC---AGT---GCAATG---CGTTTAATCGTAACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GVASA-GI------------FWR-LLLGSIVMLLGGYAGE---V------G--A-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAE--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927635 [IV-Proteo3-b] PRGD_OTU013_3b7d5fcae783b7a1749609b01d9079f7 gb|KJ927635| PRGD_OTU013_3b7d5fcae783b7a1749609b01d9079f7, putative proteorhodopsin gene, partial cds. PRGD_OTU013_3b7d5fcae783b7a1749609b01d9079f7, putative proteorhodopsin gene, partial cds. KJ927635 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACAGTGCCACTGCAAATGGTAGAATTCTACCTTATCCTTGCTGCTGTCGGCGTTGCATCTGCCGGAATATTCTGGCGTCTGTTGGTAGGTTCAATTGTCATGCTTCTCGGCGGCTATGCTGGGGAAGTTGGGGCTCTAAATGCCTGGGTTGGATTTATTATCGGAATGGCTGGCTGGTTGTACATCCTGTACGAGATTTTTGCAGGGGAGGCAGGCAAAGCTTCCGCTGAAAAAGCGCCAGAGTCAGTAAAATCCGCATTCAGTGCGATGCGCTTAATCGTAACAGTT LITVPLQMVEFYLILAAVGVASAGIFWRLLVGSIVMLLGGYAGEVGALNAWVGFIIGMAGWLYILYEIFAGEAGKASAEKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCACTGCAAATGGTAGAATTCTACCTTATCCTTGCTGCT---------GTC---GGCGTTGCATCTGCC---GGAATA------------------------------------TTCTGGCGT---CTGTTGGTAGGTTCAATTGTCATGCTTCTCGGCGGCTATGCTGGGGAA---------GTT------------------GGG------GCT---------------------------------CTA------------------------------------------------------------------AATGCC------------------TGGGTTGGA---TTTATTATCGGAATGGCTGGCTGGTTGTACATCCTGTACGAGATT---------------TTT------GCA---GGGGAGGCAGGCAAAGCTTCCGCTGAA------AAA---GCGCCAGAGTCAGTA---AAA---TCC---GCA---TTC---AGT---GCGATG---CGCTTAATCGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GVASA-GI------------FWR-LLVGSIVMLLGGYAGE---V------G--A-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAE--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927645 [IV-Proteo3-b] PRGD_OTU013_692bd96041ce760b4ebf4eb75f4cea8f gb|KJ927645| PRGD_OTU013_692bd96041ce760b4ebf4eb75f4cea8f, putative proteorhodopsin gene, partial cds. PRGD_OTU013_692bd96041ce760b4ebf4eb75f4cea8f, putative proteorhodopsin gene, partial cds. KJ927645 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) TTGATCACAGTGCCACTGCAAATGGTAGAATTCTACCTTATCCTTGCTGCTGTCGGTGTTGCATCTGCCGGAATATTCTGGCGTCTGTTGGTAGGTTCAATTGTCATGCTTCTCGGTGGCTATGCTGGGGAAGTTGGGGCTCTAAATGCCTGGGTTGGATTTATTATCGGGATGGCTGGCTGGTTGTACATCCTGTACGAGATTTTTGCAGGGGAGGCAGGCAAAGCTTCCGCTGAAAAAGCGCCAGAGTCAGTAAAATCCGCATTCAGTGCAATGCGCTTAATCGTAACAGTT LITVPLQMVEFYLILAAVGVASAGIFWRLLVGSIVMLLGGYAGEVGALNAWVGFIIGMAGWLYILYEIFAGEAGKASAEKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCACTGCAAATGGTAGAATTCTACCTTATCCTTGCTGCT---------GTC---GGTGTTGCATCTGCC---GGAATA------------------------------------TTCTGGCGT---CTGTTGGTAGGTTCAATTGTCATGCTTCTCGGTGGCTATGCTGGGGAA---------GTT------------------GGG------GCT---------------------------------CTA------------------------------------------------------------------AATGCC------------------TGGGTTGGA---TTTATTATCGGGATGGCTGGCTGGTTGTACATCCTGTACGAGATT---------------TTT------GCA---GGGGAGGCAGGCAAAGCTTCCGCTGAA------AAA---GCGCCAGAGTCAGTA---AAA---TCC---GCA---TTC---AGT---GCAATG---CGCTTAATCGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GVASA-GI------------FWR-LLVGSIVMLLGGYAGE---V------G--A-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAE--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927639 [IV-Proteo3-b] PRGD_OTU013_594d3a7922c4c770ef9900e7d71ef393 gb|KJ927639| PRGD_OTU013_594d3a7922c4c770ef9900e7d71ef393, putative proteorhodopsin gene, partial cds. PRGD_OTU013_594d3a7922c4c770ef9900e7d71ef393, putative proteorhodopsin gene, partial cds. KJ927639 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACAGTGCCACTGCAAATGGTAGAATTCTACCTTATCCTTGCTGCTGTCGGTGTTGCATCTGCCGGAATATTCTGGCGTCTGTTGTTAGGTTCAATTGTCATGCTTCTCGGCGGCTATGCTGGGGAAGTTGGGGCTCTAAATGCCTGGGTTGGATTTATTATCGGAATGGCTGGCTGGTTGTACATCCTGTACGAGATTTTTGCAGGGGAGGCGGGCAAAGCTTCCGCTGAAAAAGCGCCAGAGTCAGTAAAATCTGCTTTCAGTGCAATGCGCTTAATCGTAACAGTT LITVPLQMVEFYLILAAVGVASAGIFWRLLLGSIVMLLGGYAGEVGALNAWVGFIIGMAGWLYILYEIFAGEAGKASAEKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCACTGCAAATGGTAGAATTCTACCTTATCCTTGCTGCT---------GTC---GGTGTTGCATCTGCC---GGAATA------------------------------------TTCTGGCGT---CTGTTGTTAGGTTCAATTGTCATGCTTCTCGGCGGCTATGCTGGGGAA---------GTT------------------GGG------GCT---------------------------------CTA------------------------------------------------------------------AATGCC------------------TGGGTTGGA---TTTATTATCGGAATGGCTGGCTGGTTGTACATCCTGTACGAGATT---------------TTT------GCA---GGGGAGGCGGGCAAAGCTTCCGCTGAA------AAA---GCGCCAGAGTCAGTA---AAA---TCT---GCT---TTC---AGT---GCAATG---CGCTTAATCGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GVASA-GI------------FWR-LLLGSIVMLLGGYAGE---V------G--A-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAE--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927660 [IV-Proteo3-b] PRGD_OTU013_cb019dc3ec222bc413c379811a65a83c gb|KJ927660| PRGD_OTU013_cb019dc3ec222bc413c379811a65a83c, putative proteorhodopsin gene, partial cds. PRGD_OTU013_cb019dc3ec222bc413c379811a65a83c, putative proteorhodopsin gene, partial cds. KJ927660 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTGATCACAGTGCCACTGCAAATGGTAGAATTCTACCTGATCCTTGCTGCTGTCGGTGTTGCATCTGCCGGAATATTCTGGCGTCTGTTGTTAGGTTCAATTGTCATGCTTCTCGGCGGCTATGCTGGGGAAGTGGGGGCTTTAAATGCCTGGGTTGGATTTATTATCGGAATGGCTGGCTGGTTGTACATCCTGTACGAGATTTTTGCAGGGGAGGCAGGGAAAGCTTCCGCTGAAAAAGCGCCAGAGTCAGTGAAATCCGCCTTCAGTGCAATGCGATTAATCGTAACGGTT LITVPLQMVEFYLILAAVGVASAGIFWRLLLGSIVMLLGGYAGEVGALNAWVGFIIGMAGWLYILYEIFAGEAGKASAEKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCACTGCAAATGGTAGAATTCTACCTGATCCTTGCTGCT---------GTC---GGTGTTGCATCTGCC---GGAATA------------------------------------TTCTGGCGT---CTGTTGTTAGGTTCAATTGTCATGCTTCTCGGCGGCTATGCTGGGGAA---------GTG------------------GGG------GCT---------------------------------TTA------------------------------------------------------------------AATGCC------------------TGGGTTGGA---TTTATTATCGGAATGGCTGGCTGGTTGTACATCCTGTACGAGATT---------------TTT------GCA---GGGGAGGCAGGGAAAGCTTCCGCTGAA------AAA---GCGCCAGAGTCAGTG---AAA---TCC---GCC---TTC---AGT---GCAATG---CGATTAATCGTAACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GVASA-GI------------FWR-LLLGSIVMLLGGYAGE---V------G--A-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAE--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927646 [IV-Proteo3-b] PRGD_OTU013_6947503faaf6578c8237a83239d8c9ac gb|KJ927646| PRGD_OTU013_6947503faaf6578c8237a83239d8c9ac, putative proteorhodopsin gene, partial cds. PRGD_OTU013_6947503faaf6578c8237a83239d8c9ac, putative proteorhodopsin gene, partial cds. KJ927646 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) TTGATCACAGTGCCACTGCAAATGGTAGAGTTCTACCTTATCCTGGCTGCTGTCGGTGTTGCATCTGCCGGAATATTCTGGCGTCTGTTGGTAGGTTCAGTTGTCATGCTTCTCGGCGGCTATGCCGGGGAAGTTGGGGCTCTAAATGCCTGGGTTGGATTTATTATCGGAATGGCTGGCTGGTTGTACATCCTGTACGAGATCTTTGCAGGAGAGGCGGGCAAAGCTTCCGCTGAAAAAGCGCCAGAGTCAGTAAAATCCGCTTTCAGTGCAATGCGCTTAATCGTAACAATT LITVPLQMVEFYLILAAVGVASAGIFWRLLVGSVVMLLGGYAGEVGALNAWVGFIIGMAGWLYILYEIFAGEAGKASAEKAPESVKSAFSAMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCACTGCAAATGGTAGAGTTCTACCTTATCCTGGCTGCT---------GTC---GGTGTTGCATCTGCC---GGAATA------------------------------------TTCTGGCGT---CTGTTGGTAGGTTCAGTTGTCATGCTTCTCGGCGGCTATGCCGGGGAA---------GTT------------------GGG------GCT---------------------------------CTA------------------------------------------------------------------AATGCC------------------TGGGTTGGA---TTTATTATCGGAATGGCTGGCTGGTTGTACATCCTGTACGAGATC---------------TTT------GCA---GGAGAGGCGGGCAAAGCTTCCGCTGAA------AAA---GCGCCAGAGTCAGTA---AAA---TCC---GCT---TTC---AGT---GCAATG---CGCTTAATCGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GVASA-GI------------FWR-LLVGSVVMLLGGYAGE---V------G--A-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAE--K-APESV-K-S-A-F-S-AM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927649 [IV-Proteo3-b] PRGD_OTU013_7cb201345ba9994f9bf56ffe26fc74d0 gb|KJ927649| PRGD_OTU013_7cb201345ba9994f9bf56ffe26fc74d0, putative proteorhodopsin gene, partial cds. PRGD_OTU013_7cb201345ba9994f9bf56ffe26fc74d0, putative proteorhodopsin gene, partial cds. KJ927649 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACAGTGCCACTGCAAATGGTAGAGTTCTACCTTATCCTGGCTGCTGTCGGTGTTGCATCTGCCGGAATATTCTGGCGTCTGTTGGTAGGTTCAGTTGTCATGCTTCTCGGCGGCTATGCCGGGGAAGTTGGGGCTCTAAATGCCTGGGTTGGATTTATTATCGGAATGGCTGGCTGGTTGTACATCCTGTACGAGATCTTTGCAGGTGAGGCGGGCAAAGCTTCCGCTGAAAAAGCGCCAGAGTCAGTCAAATCCGCTTTCAGTGCAATGCGCTTAATCGTAACAATT LITVPLQMVEFYLILAAVGVASAGIFWRLLVGSVVMLLGGYAGEVGALNAWVGFIIGMAGWLYILYEIFAGEAGKASAEKAPESVKSAFSAMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCACTGCAAATGGTAGAGTTCTACCTTATCCTGGCTGCT---------GTC---GGTGTTGCATCTGCC---GGAATA------------------------------------TTCTGGCGT---CTGTTGGTAGGTTCAGTTGTCATGCTTCTCGGCGGCTATGCCGGGGAA---------GTT------------------GGG------GCT---------------------------------CTA------------------------------------------------------------------AATGCC------------------TGGGTTGGA---TTTATTATCGGAATGGCTGGCTGGTTGTACATCCTGTACGAGATC---------------TTT------GCA---GGTGAGGCGGGCAAAGCTTCCGCTGAA------AAA---GCGCCAGAGTCAGTC---AAA---TCC---GCT---TTC---AGT---GCAATG---CGCTTAATCGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GVASA-GI------------FWR-LLVGSVVMLLGGYAGE---V------G--A-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAE--K-APESV-K-S-A-F-S-AM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927665 [IV-Proteo3-b] PRGD_OTU013_e132bfead809e6f4fde840e83537ebe6 gb|KJ927665| PRGD_OTU013_e132bfead809e6f4fde840e83537ebe6, putative proteorhodopsin gene, partial cds. PRGD_OTU013_e132bfead809e6f4fde840e83537ebe6, putative proteorhodopsin gene, partial cds. KJ927665 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACAGTGCCACTGCAAATGGTAGAATTCTACCTTATCCTTGCTGCTGTCGGTGTTGCATCTGCCGGAATATTCTGGCGTCTGTTGGTAGGTTCAATTGTCATGCTTCTCGGGGGCTATGCTGGGGAAGTTGGGGCTCTAAATGCCTGGGTTGGATTTATTATCGGAATGGCTGGTTGGTTGTACATCCTGTACGAGATCTTTGCAGGGGAGGCAGGCAAAGCTTCCGCTGAGAAAGCGCCGGAGTCAGTAAAATCCGCATTCAGTGCAATGCGCTTAATCGTAACAATT LITVPLQMVEFYLILAAVGVASAGIFWRLLVGSIVMLLGGYAGEVGALNAWVGFIIGMAGWLYILYEIFAGEAGKASAEKAPESVKSAFSAMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCACTGCAAATGGTAGAATTCTACCTTATCCTTGCTGCT---------GTC---GGTGTTGCATCTGCC---GGAATA------------------------------------TTCTGGCGT---CTGTTGGTAGGTTCAATTGTCATGCTTCTCGGGGGCTATGCTGGGGAA---------GTT------------------GGG------GCT---------------------------------CTA------------------------------------------------------------------AATGCC------------------TGGGTTGGA---TTTATTATCGGAATGGCTGGTTGGTTGTACATCCTGTACGAGATC---------------TTT------GCA---GGGGAGGCAGGCAAAGCTTCCGCTGAG------AAA---GCGCCGGAGTCAGTA---AAA---TCC---GCA---TTC---AGT---GCAATG---CGCTTAATCGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GVASA-GI------------FWR-LLVGSIVMLLGGYAGE---V------G--A-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAE--K-APESV-K-S-A-F-S-AM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927629 [IV-Proteo3-b] PRGD_OTU013_2dca5a5c9ae5e9d585fb3049fdea7a34 gb|KJ927629| PRGD_OTU013_2dca5a5c9ae5e9d585fb3049fdea7a34, putative proteorhodopsin gene, partial cds. PRGD_OTU013_2dca5a5c9ae5e9d585fb3049fdea7a34, putative proteorhodopsin gene, partial cds. KJ927629 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACAGTGCCACTGCAAATGGTAGAATTCTACCTAATCCTTGCTGCTGTCGGTGTTGCATCTGCCGGAATATTCTGGCGTCTGTTGGTAGGTTCAATTGTCATGCTTCTCGGCGGCTATGCCGGGGAAGTTGGGGCTATAAATGCCTGGGTTGGATTTATTATCGGAATGGCTGGCTGGTTGTACATTCTGTACGAGATTTTTGCAGGGGAGGCAGGCAAAGCTTCCGCTGACAAAGCGCCAGAGTCAGTAAAATCCGCATTCAGTGCAATGCGCTTAATCGTAACAGTT LITVPLQMVEFYLILAAVGVASAGIFWRLLVGSIVMLLGGYAGEVGAINAWVGFIIGMAGWLYILYEIFAGEAGKASADKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCACTGCAAATGGTAGAATTCTACCTAATCCTTGCTGCT---------GTC---GGTGTTGCATCTGCC---GGAATA------------------------------------TTCTGGCGT---CTGTTGGTAGGTTCAATTGTCATGCTTCTCGGCGGCTATGCCGGGGAA---------GTT------------------GGG------GCT---------------------------------ATA------------------------------------------------------------------AATGCC------------------TGGGTTGGA---TTTATTATCGGAATGGCTGGCTGGTTGTACATTCTGTACGAGATT---------------TTT------GCA---GGGGAGGCAGGCAAAGCTTCCGCTGAC------AAA---GCGCCAGAGTCAGTA---AAA---TCC---GCA---TTC---AGT---GCAATG---CGCTTAATCGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GVASA-GI------------FWR-LLVGSIVMLLGGYAGE---V------G--A-----------I----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAD--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927659 [IV-Proteo3-b] PRGD_OTU013_c93a983a27ed11e3766bb74861cb3a5e gb|KJ927659| PRGD_OTU013_c93a983a27ed11e3766bb74861cb3a5e, putative proteorhodopsin gene, partial cds. PRGD_OTU013_c93a983a27ed11e3766bb74861cb3a5e, putative proteorhodopsin gene, partial cds. KJ927659 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACAGTGCCACTGCAAATGGTAGAATTCTACCTAATCCTTGCTGCTGTCGGTGTTGCATCTGCCGGAATATTCTGGCGTCTGTTGGTAGGTTCAATTGTCATGCTTCTCGGCGGCTATGCCGGGGAAGTTGGGGCCATAAATGCCTGGGTTGGATTTATTATCGGAATGGCTGGCTGGTTGTACATTCTGTACGAGATTTTTGCAGGAGAGGCAGGCAAAGCTTCCGCTGAAAAAGCGCCAGAGTCAGTAAAATCCGCATTCAGTGCAATGCGCTTAATCGTAACAGTT LITVPLQMVEFYLILAAVGVASAGIFWRLLVGSIVMLLGGYAGEVGAINAWVGFIIGMAGWLYILYEIFAGEAGKASAEKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCACTGCAAATGGTAGAATTCTACCTAATCCTTGCTGCT---------GTC---GGTGTTGCATCTGCC---GGAATA------------------------------------TTCTGGCGT---CTGTTGGTAGGTTCAATTGTCATGCTTCTCGGCGGCTATGCCGGGGAA---------GTT------------------GGG------GCC---------------------------------ATA------------------------------------------------------------------AATGCC------------------TGGGTTGGA---TTTATTATCGGAATGGCTGGCTGGTTGTACATTCTGTACGAGATT---------------TTT------GCA---GGAGAGGCAGGCAAAGCTTCCGCTGAA------AAA---GCGCCAGAGTCAGTA---AAA---TCC---GCA---TTC---AGT---GCAATG---CGCTTAATCGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GVASA-GI------------FWR-LLVGSIVMLLGGYAGE---V------G--A-----------I----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAE--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927619 [IV-Proteo3-b] PRGD_OTU013_0022a23ca0c4936e0fe8dce2dabe600d gb|KJ927619| PRGD_OTU013_0022a23ca0c4936e0fe8dce2dabe600d, putative proteorhodopsin gene, partial cds. PRGD_OTU013_0022a23ca0c4936e0fe8dce2dabe600d, putative proteorhodopsin gene, partial cds. KJ927619 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTGATCACAGTGCCACTGCAAATGGTAGAATTCTACCTAATCCTTGCTGCTGTCGGTGTTGCATCTGGCGGAATATTCTGGCGTCTGTTGGTAGGTTCAATTGTCATGCTTCTCGGCGGCTATGCTGGGGAAGTTGGGGCTATTAATGCCTGGGTTGGATTTATTATCGGAATGGCTGGCTGGTTGTACATTCTGTACGAGATTTTTGCAGGAGAGGCGGGCAAAGCTTCCGCTGAAAAAGCGCCAGAGTCAGTAAAATCCGCATTCAGCGCAATGCGCTTAATCGTAACAGTT LITVPLQMVEFYLILAAVGVASGGIFWRLLVGSIVMLLGGYAGEVGAINAWVGFIIGMAGWLYILYEIFAGEAGKASAEKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCACTGCAAATGGTAGAATTCTACCTAATCCTTGCTGCT---------GTC---GGTGTTGCATCTGGC---GGAATA------------------------------------TTCTGGCGT---CTGTTGGTAGGTTCAATTGTCATGCTTCTCGGCGGCTATGCTGGGGAA---------GTT------------------GGG------GCT---------------------------------ATT------------------------------------------------------------------AATGCC------------------TGGGTTGGA---TTTATTATCGGAATGGCTGGCTGGTTGTACATTCTGTACGAGATT---------------TTT------GCA---GGAGAGGCGGGCAAAGCTTCCGCTGAA------AAA---GCGCCAGAGTCAGTA---AAA---TCC---GCA---TTC---AGC---GCAATG---CGCTTAATCGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GVASG-GI------------FWR-LLVGSIVMLLGGYAGE---V------G--A-----------I----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAE--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927627 [IV-Proteo3-b] PRGD_OTU013_2455861b60a4dfa0a7a1e327d990a8a0 gb|KJ927627| PRGD_OTU013_2455861b60a4dfa0a7a1e327d990a8a0, putative proteorhodopsin gene, partial cds. PRGD_OTU013_2455861b60a4dfa0a7a1e327d990a8a0, putative proteorhodopsin gene, partial cds. KJ927627 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTGATCACAGTGCCACTGCAAATGGTAGAATTCTACCTTATCCTTGCTGCTGTCGGTGTTGCATCTGCCGGAATATTCTGGCGTCTGCTGGTAGGTTCAATTGTCATGCTTCTCGGCGGCTATGCTGGGGAAGTTGGGGCTCTAAATGCCTGGGTTGGATTTATTATCGGAATGGCTGGCTGGTTGTACATCCTGTACGAGATTTTTGCAGGAGAGGCGGGCAAAGCTTCCGCTGAAAAAGCGCCAGAGTCAGTAAAATCCGCTTTCAGTGCAATGCGCTTAATCGTGACAGTT LITVPLQMVEFYLILAAVGVASAGIFWRLLVGSIVMLLGGYAGEVGALNAWVGFIIGMAGWLYILYEIFAGEAGKASAEKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCACTGCAAATGGTAGAATTCTACCTTATCCTTGCTGCT---------GTC---GGTGTTGCATCTGCC---GGAATA------------------------------------TTCTGGCGT---CTGCTGGTAGGTTCAATTGTCATGCTTCTCGGCGGCTATGCTGGGGAA---------GTT------------------GGG------GCT---------------------------------CTA------------------------------------------------------------------AATGCC------------------TGGGTTGGA---TTTATTATCGGAATGGCTGGCTGGTTGTACATCCTGTACGAGATT---------------TTT------GCA---GGAGAGGCGGGCAAAGCTTCCGCTGAA------AAA---GCGCCAGAGTCAGTA---AAA---TCC---GCT---TTC---AGT---GCAATG---CGCTTAATCGTGACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GVASA-GI------------FWR-LLVGSIVMLLGGYAGE---V------G--A-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAE--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927632 [IV-Proteo3-b] PRGD_OTU013_37a2dd24c1b59cb01e5d99df2ec7d3fb gb|KJ927632| PRGD_OTU013_37a2dd24c1b59cb01e5d99df2ec7d3fb, putative proteorhodopsin gene, partial cds. PRGD_OTU013_37a2dd24c1b59cb01e5d99df2ec7d3fb, putative proteorhodopsin gene, partial cds. KJ927632 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACAGTGCCACTGCAAATGGTAGAATTCTACCTTATCCTGGCTGCTGTCGGTGTTGCATCTGCCGGAATATTCTGGCGTCTGTTGGTAGGTTCAGTTGTCATGCTTCTCGGCGGCTATGCTGGGGAAGTTGGGGCTCTAAATGCCTGGGTTGGATTTATTATCGGAATGGCTGGCTGGTTATACATCCTGTACGAGATTTTTGCAGGAGAGGCGGGCAAAGCCTCCGCTGAAAAAGCTCCAGAGTCAGTAAAATCCGCTTTCAGTGCAATGCGCTTAATCGTAACAGTT LITVPLQMVEFYLILAAVGVASAGIFWRLLVGSVVMLLGGYAGEVGALNAWVGFIIGMAGWLYILYEIFAGEAGKASAEKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCACTGCAAATGGTAGAATTCTACCTTATCCTGGCTGCT---------GTC---GGTGTTGCATCTGCC---GGAATA------------------------------------TTCTGGCGT---CTGTTGGTAGGTTCAGTTGTCATGCTTCTCGGCGGCTATGCTGGGGAA---------GTT------------------GGG------GCT---------------------------------CTA------------------------------------------------------------------AATGCC------------------TGGGTTGGA---TTTATTATCGGAATGGCTGGCTGGTTATACATCCTGTACGAGATT---------------TTT------GCA---GGAGAGGCGGGCAAAGCCTCCGCTGAA------AAA---GCTCCAGAGTCAGTA---AAA---TCC---GCT---TTC---AGT---GCAATG---CGCTTAATCGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GVASA-GI------------FWR-LLVGSVVMLLGGYAGE---V------G--A-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAE--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927641 [IV-Proteo3-b] PRGD_OTU013_62c2513c1e56940f5af57daa1ed01e0a gb|KJ927641| PRGD_OTU013_62c2513c1e56940f5af57daa1ed01e0a, putative proteorhodopsin gene, partial cds. PRGD_OTU013_62c2513c1e56940f5af57daa1ed01e0a, putative proteorhodopsin gene, partial cds. KJ927641 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) TTGATCACAGTGCCACTGCAAATGGTAGAATTCTACCTTATCCTTGCTGCTGTCGGTGTTGCATCTGCCGGAATATTCTGGCGTCTGTTGTTAGGTTCAATTGTCATGCTTCTCGGCGGCTATGCTGGGGAAGTTGGGGCTCTAAATGCCTGGGTTGGATTTATTATCGGAATGGCTGGCTGGTTGTACATCCTGTACGAGATTTTTGCAGGAGAGGCGGGCAAAGCTTCCGCTGAAAAAGCGCCAGAGTCAGTAAAATCCGCTTTCAGTGCAATGCGCTTAATCGTAACAGTT LITVPLQMVEFYLILAAVGVASAGIFWRLLLGSIVMLLGGYAGEVGALNAWVGFIIGMAGWLYILYEIFAGEAGKASAEKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCACTGCAAATGGTAGAATTCTACCTTATCCTTGCTGCT---------GTC---GGTGTTGCATCTGCC---GGAATA------------------------------------TTCTGGCGT---CTGTTGTTAGGTTCAATTGTCATGCTTCTCGGCGGCTATGCTGGGGAA---------GTT------------------GGG------GCT---------------------------------CTA------------------------------------------------------------------AATGCC------------------TGGGTTGGA---TTTATTATCGGAATGGCTGGCTGGTTGTACATCCTGTACGAGATT---------------TTT------GCA---GGAGAGGCGGGCAAAGCTTCCGCTGAA------AAA---GCGCCAGAGTCAGTA---AAA---TCC---GCT---TTC---AGT---GCAATG---CGCTTAATCGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GVASA-GI------------FWR-LLLGSIVMLLGGYAGE---V------G--A-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAE--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927620 [IV-Proteo3-b] PRGD_OTU013_04eea259e311018861d14fbc00169ea2 gb|KJ927620| PRGD_OTU013_04eea259e311018861d14fbc00169ea2, putative proteorhodopsin gene, partial cds. PRGD_OTU013_04eea259e311018861d14fbc00169ea2, putative proteorhodopsin gene, partial cds. KJ927620 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTGATCACAGTGCCACTGCAAATGGTAGAATTCTACCTTATCCTTGCTGCTGTCGGTGTTGCATCTGCCGGAATATTCTGGCGTCTGTTGGTAGGTTCAATTGTGATGCTTCTCGGCGGCTATGCTGGGGAAGTTGGGGCTCTAAATGCCTGGGTTGGATTTATTATCGGAATGGCTGGCTGGTTGTACATCCTGTACGAGATTTTTGCAGGGGAGGCGGGCAAAGCTTCCGCTGAAAAAGCGCCAGAATCAGTAAAATCCGCATTCAGTGCAATGCGCTTAATCGTAACAGTT LITVPLQMVEFYLILAAVGVASAGIFWRLLVGSIVMLLGGYAGEVGALNAWVGFIIGMAGWLYILYEIFAGEAGKASAEKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCACTGCAAATGGTAGAATTCTACCTTATCCTTGCTGCT---------GTC---GGTGTTGCATCTGCC---GGAATA------------------------------------TTCTGGCGT---CTGTTGGTAGGTTCAATTGTGATGCTTCTCGGCGGCTATGCTGGGGAA---------GTT------------------GGG------GCT---------------------------------CTA------------------------------------------------------------------AATGCC------------------TGGGTTGGA---TTTATTATCGGAATGGCTGGCTGGTTGTACATCCTGTACGAGATT---------------TTT------GCA---GGGGAGGCGGGCAAAGCTTCCGCTGAA------AAA---GCGCCAGAATCAGTA---AAA---TCC---GCA---TTC---AGT---GCAATG---CGCTTAATCGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GVASA-GI------------FWR-LLVGSIVMLLGGYAGE---V------G--A-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAE--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927653 [IV-Proteo3-b] PRGD_OTU013_8879e9c1a2688ee127ae2257b89c88bc gb|KJ927653| PRGD_OTU013_8879e9c1a2688ee127ae2257b89c88bc, putative proteorhodopsin gene, partial cds. PRGD_OTU013_8879e9c1a2688ee127ae2257b89c88bc, putative proteorhodopsin gene, partial cds. KJ927653 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACAGTGCCACTGCAAATGGTAGAATTCTACCTTATCCTTGCTGCTGTCGGTGTTGCATCTGCCGGAATATTCTGGCGTCTGTTGGTAGGTTCAATTGTCATGCTTCTCGGCGGCTATGCTGGGGAAGTTGGGGCTCTAAATGCCTGGGTTGGATTTATTATCGGAATGGCTGGCTGGTTGTACATCCTGTACGAGATTTTTGCAGGAGAGGCAGGCAAAGCTTCTGCTGAAAAAGCGCCAGAGTCAGTAAAATCCGCATTCAGTGCAATGCGCTTAATCGTAACAGTT LITVPLQMVEFYLILAAVGVASAGIFWRLLVGSIVMLLGGYAGEVGALNAWVGFIIGMAGWLYILYEIFAGEAGKASAEKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCACTGCAAATGGTAGAATTCTACCTTATCCTTGCTGCT---------GTC---GGTGTTGCATCTGCC---GGAATA------------------------------------TTCTGGCGT---CTGTTGGTAGGTTCAATTGTCATGCTTCTCGGCGGCTATGCTGGGGAA---------GTT------------------GGG------GCT---------------------------------CTA------------------------------------------------------------------AATGCC------------------TGGGTTGGA---TTTATTATCGGAATGGCTGGCTGGTTGTACATCCTGTACGAGATT---------------TTT------GCA---GGAGAGGCAGGCAAAGCTTCTGCTGAA------AAA---GCGCCAGAGTCAGTA---AAA---TCC---GCA---TTC---AGT---GCAATG---CGCTTAATCGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GVASA-GI------------FWR-LLVGSIVMLLGGYAGE---V------G--A-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAE--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927624 [IV-Proteo3-b] PRGD_OTU013_0fb16d6f7adfe5dae8e68189c4f4f47a gb|KJ927624| PRGD_OTU013_0fb16d6f7adfe5dae8e68189c4f4f47a, putative proteorhodopsin gene, partial cds. PRGD_OTU013_0fb16d6f7adfe5dae8e68189c4f4f47a, putative proteorhodopsin gene, partial cds. KJ927624 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Arctic Ocean-Pacific side (69.5142, -133.4185), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACAGTGCCACTGCAAATGGTAGAATTCTACCTTATCCTTGCTGCTGTCGGTGTTGCATCTGCCGGAATATTCTGGCGTCTGTTGTTAGGTTCAATTGTCATGCTACTCGGCGGCTATGCTGGGGAAGTTGGGGCTCTAAATGCCTGGGTTGGATTTATTATTGGAATGGCTGGCTGGTTGTACATCTTGTACGAGATTTTTGCAGGAGAGGCAGGCAAAGCTTCCGCTGAAAAAGCGCCAGAGTCAGTAAAATCCGCATTCAGTGCAATGCGCTTAATCGTAACAGTT LITVPLQMVEFYLILAAVGVASAGIFWRLLLGSIVMLLGGYAGEVGALNAWVGFIIGMAGWLYILYEIFAGEAGKASAEKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCACTGCAAATGGTAGAATTCTACCTTATCCTTGCTGCT---------GTC---GGTGTTGCATCTGCC---GGAATA------------------------------------TTCTGGCGT---CTGTTGTTAGGTTCAATTGTCATGCTACTCGGCGGCTATGCTGGGGAA---------GTT------------------GGG------GCT---------------------------------CTA------------------------------------------------------------------AATGCC------------------TGGGTTGGA---TTTATTATTGGAATGGCTGGCTGGTTGTACATCTTGTACGAGATT---------------TTT------GCA---GGAGAGGCAGGCAAAGCTTCCGCTGAA------AAA---GCGCCAGAGTCAGTA---AAA---TCC---GCA---TTC---AGT---GCAATG---CGCTTAATCGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GVASA-GI------------FWR-LLLGSIVMLLGGYAGE---V------G--A-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAE--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927666 [IV-Proteo3-b] PRGD_OTU013_e951ddd4bb19813453d9c2c8596ab1b5 gb|KJ927666| PRGD_OTU013_e951ddd4bb19813453d9c2c8596ab1b5, putative proteorhodopsin gene, partial cds. PRGD_OTU013_e951ddd4bb19813453d9c2c8596ab1b5, putative proteorhodopsin gene, partial cds. KJ927666 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACAGTGCCACTGCAAATGGTAGAATTCTACCTTATCCTTGCTGCTGTCGGTGTTGCATCTGCCGGAATATTCTGGCGTCTGTTGTTAGGTTCAATTGTCATGCTTCTCGGCGGCTATGCTGGGGAAGTAGGGGCTCTACCTGTCTGGGTTGGATTTATTATCGGAATGGCTGGCTGGTTGTACATCCTGTACGAGATTTTTGCAGGAGAGGCAGGCAAAGCTTCCGCTGAAAAAGCGCCAGAGTCAGTAAAATCCGCTTTCAGTGCAATGCGTTTAATCGTTACAGTT LITVPLQMVEFYLILAAVGVASAGIFWRLLLGSIVMLLGGYAGEVGALPVWVGFIIGMAGWLYILYEIFAGEAGKASAEKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCACTGCAAATGGTAGAATTCTACCTTATCCTTGCTGCT---------GTC---GGTGTTGCATCTGCC---GGAATA------------------------------------TTCTGGCGT---CTGTTGTTAGGTTCAATTGTCATGCTTCTCGGCGGCTATGCTGGGGAA---------GTA------------------GGG------GCT---------------------------------CTA------------------------------------------------------------------CCTGTC------------------TGGGTTGGA---TTTATTATCGGAATGGCTGGCTGGTTGTACATCCTGTACGAGATT---------------TTT------GCA---GGAGAGGCAGGCAAAGCTTCCGCTGAA------AAA---GCGCCAGAGTCAGTA---AAA---TCC---GCT---TTC---AGT---GCAATG---CGTTTAATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GVASA-GI------------FWR-LLLGSIVMLLGGYAGE---V------G--A-----------L----------------------PV------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAE--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927622 [IV-Proteo3-b] PRGD_OTU013_097b6786408dc9d0976187ef7e675c31 gb|KJ927622| PRGD_OTU013_097b6786408dc9d0976187ef7e675c31, putative proteorhodopsin gene, partial cds. PRGD_OTU013_097b6786408dc9d0976187ef7e675c31, putative proteorhodopsin gene, partial cds. KJ927622 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Arctic Ocean-Atlantic side (73.9992, 19.2097), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACAGTGCCACTGCAAATGGTAGAGTTCTACCTAATACTTGCGGCTGTCGGTGTTGCATCTGGCGGAATATTCTGGCGTTTGTTGATAGGTTCAATTGTCATGCTTCTCGGCGGCTATGCTGGAGAAGTTGGGGCTATCAATGCCTGGGTTGGATTTATTATCGGAATGGCTGGCTGGTTGTACATCCTGTACGAGATTTTTGCAGGGGAGGCAGGCAAAGCTTCTGCTGAAAAAGCACCCGAGTCAGTAAAATCCGCATTCAGTGCAATGCGATTAATCGTAACAGTC LITVPLQMVEFYLILAAVGVASGGIFWRLLIGSIVMLLGGYAGEVGAINAWVGFIIGMAGWLYILYEIFAGEAGKASAEKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCACTGCAAATGGTAGAGTTCTACCTAATACTTGCGGCT---------GTC---GGTGTTGCATCTGGC---GGAATA------------------------------------TTCTGGCGT---TTGTTGATAGGTTCAATTGTCATGCTTCTCGGCGGCTATGCTGGAGAA---------GTT------------------GGG------GCT---------------------------------ATC------------------------------------------------------------------AATGCC------------------TGGGTTGGA---TTTATTATCGGAATGGCTGGCTGGTTGTACATCCTGTACGAGATT---------------TTT------GCA---GGGGAGGCAGGCAAAGCTTCTGCTGAA------AAA---GCACCCGAGTCAGTA---AAA---TCC---GCA---TTC---AGT---GCAATG---CGATTAATCGTAACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GVASG-GI------------FWR-LLIGSIVMLLGGYAGE---V------G--A-----------I----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAE--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927625 [IV-Proteo3-b] PRGD_OTU013_13af09a11651ac4d213643ce65b3dfb5 gb|KJ927625| PRGD_OTU013_13af09a11651ac4d213643ce65b3dfb5, putative proteorhodopsin gene, partial cds. PRGD_OTU013_13af09a11651ac4d213643ce65b3dfb5, putative proteorhodopsin gene, partial cds. KJ927625 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) CTAATTACCGTTCCGCTGCAAATGGTAGAATTCTACCTTATACTTGCAGCAGTGGGGGCAGCTTCGGCTGGTATCTTCTGGCGCCTTTTGATTGGCTCTTTGGTAATGCTCCTCGGAGGTTACGCTGGTGAAGTTGGTGCCCTTGCAGTTTGGCCTGCGTTTATCATTGGAATGGCTGGGTGGCTGTTCATCTTGTGGGAAATCTTTGCAGGAGAAGCAGGTAAAGCTTCAGCTGAAAAAGCACCAGAGTCGGTCAAATCTGCCTTTAGCGCTATGCGTTTAATTGTTACTGTT LITVPLQMVEFYLILAAVGAASAGIFWRLLIGSLVMLLGGYAGEVGALAVWPAFIIGMAGWLFILWEIFAGEAGKASAEKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACCGTTCCGCTGCAAATGGTAGAATTCTACCTTATACTTGCAGCA---------GTG---GGGGCAGCTTCGGCT---GGTATC------------------------------------TTCTGGCGC---CTTTTGATTGGCTCTTTGGTAATGCTCCTCGGAGGTTACGCTGGTGAA---------GTT------------------GGT------GCC---------------------------------CTT------------------------------------------------------------------GCAGTT------------------TGGCCTGCG---TTTATCATTGGAATGGCTGGGTGGCTGTTCATCTTGTGGGAAATC---------------TTT------GCA---GGAGAAGCAGGTAAAGCTTCAGCTGAA------AAA---GCACCAGAGTCGGTC---AAA---TCT---GCC---TTT---AGC---GCTATG---CGTTTAATTGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GAASA-GI------------FWR-LLIGSLVMLLGGYAGE---V------G--A-----------L----------------------AV------WPA-FIIGMAGWLFILWEI-----F--A-GEAGKASAE--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927633 [IV-Proteo3-b] PRGD_OTU013_37f72b1b47603f544bb4d7e4f7ea95fd gb|KJ927633| PRGD_OTU013_37f72b1b47603f544bb4d7e4f7ea95fd, putative proteorhodopsin gene, partial cds. PRGD_OTU013_37f72b1b47603f544bb4d7e4f7ea95fd, putative proteorhodopsin gene, partial cds. KJ927633 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTGATTACCGTTCCGCTTCAAATGATAGAGTTCTATCTTATACTTGCAGCAGTGGGGGCAGCATCGGCTGGTATCTTCTGGCGTCTTTTGATTGGCTCATTGGTAATGCTTCTCGGAGGGTACGCTGGTGAGGTTGGTGCTCTTGCAGTTTGGCCTGCCTTTATTATCGGAATGGCTGGATGGCTGTTTATCTTGTGGGAGATCTTTGCTGGAGAAGCAGGCAAAGCTTCAGCAGAAAAAGCACCAGAGTCGGTCAAATCTGCTTTTAGCGCAATGCGTTTAATCGTTACCGTC LITVPLQMIEFYLILAAVGAASAGIFWRLLIGSLVMLLGGYAGEVGALAVWPAFIIGMAGWLFILWEIFAGEAGKASAEKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACCGTTCCGCTTCAAATGATAGAGTTCTATCTTATACTTGCAGCA---------GTG---GGGGCAGCATCGGCT---GGTATC------------------------------------TTCTGGCGT---CTTTTGATTGGCTCATTGGTAATGCTTCTCGGAGGGTACGCTGGTGAG---------GTT------------------GGT------GCT---------------------------------CTT------------------------------------------------------------------GCAGTT------------------TGGCCTGCC---TTTATTATCGGAATGGCTGGATGGCTGTTTATCTTGTGGGAGATC---------------TTT------GCT---GGAGAAGCAGGCAAAGCTTCAGCAGAA------AAA---GCACCAGAGTCGGTC---AAA---TCT---GCT---TTT---AGC---GCAATG---CGTTTAATCGTTACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---V-GAASA-GI------------FWR-LLIGSLVMLLGGYAGE---V------G--A-----------L----------------------AV------WPA-FIIGMAGWLFILWEI-----F--A-GEAGKASAE--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927631 [IV-Proteo3-b] PRGD_OTU013_32ccbce7a353526a805ebfe9bf9d6971 gb|KJ927631| PRGD_OTU013_32ccbce7a353526a805ebfe9bf9d6971, putative proteorhodopsin gene, partial cds. PRGD_OTU013_32ccbce7a353526a805ebfe9bf9d6971, putative proteorhodopsin gene, partial cds. KJ927631 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATTACTGTTCCACTGCAAATGGTAGAGTTCTACCTTATACTTGCAGCTGTAGGGGCAGCTTCGGCTGGCATTTTCTGGCGCCTTTTGATTGGAACATTGGTAATGCTCCTCGGAGGTTACGCTGGTGAAGTGGGTGCTCTTGCAGTTTGGCCTGCATTTATTATTGGAATGGCTGGGTGGCTATTCATTTTGTGGGAGATTTTTGCAGGAGAAGCAGGCAAAGCTTCAGCAGAAAAAGCACCAGAGTCGGTCAAATCTGCATTTAGCGCCATGCGTTTAATCGTTACCGTC LITVPLQMVEFYLILAAVGAASAGIFWRLLIGTLVMLLGGYAGEVGALAVWPAFIIGMAGWLFILWEIFAGEAGKASAEKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTTCCACTGCAAATGGTAGAGTTCTACCTTATACTTGCAGCT---------GTA---GGGGCAGCTTCGGCT---GGCATT------------------------------------TTCTGGCGC---CTTTTGATTGGAACATTGGTAATGCTCCTCGGAGGTTACGCTGGTGAA---------GTG------------------GGT------GCT---------------------------------CTT------------------------------------------------------------------GCAGTT------------------TGGCCTGCA---TTTATTATTGGAATGGCTGGGTGGCTATTCATTTTGTGGGAGATT---------------TTT------GCA---GGAGAAGCAGGCAAAGCTTCAGCAGAA------AAA---GCACCAGAGTCGGTC---AAA---TCT---GCA---TTT---AGC---GCCATG---CGTTTAATCGTTACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GAASA-GI------------FWR-LLIGTLVMLLGGYAGE---V------G--A-----------L----------------------AV------WPA-FIIGMAGWLFILWEI-----F--A-GEAGKASAE--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927670 [IV-Proteo3-b] PRGD_OTU013_fd40f56e42b5b3a6820daa32c8d2898d gb|KJ927670| PRGD_OTU013_fd40f56e42b5b3a6820daa32c8d2898d, putative proteorhodopsin gene, partial cds. PRGD_OTU013_fd40f56e42b5b3a6820daa32c8d2898d, putative proteorhodopsin gene, partial cds. KJ927670 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATTACTGTTCCACTGCAAATGGTAGAGTTCTACCTTATACTTGCGGCTGTAGGGGCAGCTTCGGCTGGTATTTTCTGGCGCCTTTTGATTGGCACATTAGTAATGCTCCTCGGAGGTTACGCTGGTGAAGTTGGTGCCCTTGCTGTGTGGCCTGCATTTATTATTGGAATGGCTGGATGGCTGTTTATTTTGTGGGAGATTTTTGCTGGAGAAGCTGGCAAAGCTTCAGCAGAAAAAGCACCAGAGTCGGTCAAATCTGCGTTTAGCGCTATGCGTTTAATTGTTACCGTC LITVPLQMVEFYLILAAVGAASAGIFWRLLIGTLVMLLGGYAGEVGALAVWPAFIIGMAGWLFILWEIFAGEAGKASAEKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTTCCACTGCAAATGGTAGAGTTCTACCTTATACTTGCGGCT---------GTA---GGGGCAGCTTCGGCT---GGTATT------------------------------------TTCTGGCGC---CTTTTGATTGGCACATTAGTAATGCTCCTCGGAGGTTACGCTGGTGAA---------GTT------------------GGT------GCC---------------------------------CTT------------------------------------------------------------------GCTGTG------------------TGGCCTGCA---TTTATTATTGGAATGGCTGGATGGCTGTTTATTTTGTGGGAGATT---------------TTT------GCT---GGAGAAGCTGGCAAAGCTTCAGCAGAA------AAA---GCACCAGAGTCGGTC---AAA---TCT---GCG---TTT---AGC---GCTATG---CGTTTAATTGTTACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GAASA-GI------------FWR-LLIGTLVMLLGGYAGE---V------G--A-----------L----------------------AV------WPA-FIIGMAGWLFILWEI-----F--A-GEAGKASAE--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927634 [IV-Proteo3-b] PRGD_OTU013_38623d22e735ec53ad3def3010b4988f gb|KJ927634| PRGD_OTU013_38623d22e735ec53ad3def3010b4988f, putative proteorhodopsin gene, partial cds. PRGD_OTU013_38623d22e735ec53ad3def3010b4988f, putative proteorhodopsin gene, partial cds. KJ927634 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACAGTCCCACTACAAATGGTAGAATTCTACCTCATACTTGCTGCTGTAGGCGCAGCTTCGGCGGGCATTTTCTGGCGTCTTTTCATCGGCTCACTGGTTATGCTGCTCGGAGGATATGCTGGTGAAGTTGGTGCCCTTGCAGTTTGGCCAGCGTTCATTATTGGAATGGCTGGATGGCTGTTCATCTTGTGGGAAATTTTTGCAGGAGAAGCAGGCAAGGCCTCAGCAGAAAAAGCGCCAGAATCGGTCAAATCAGCTTTTAGCACAATGCGTTTGATCGTTACAATT LITVPLQMVEFYLILAAVGAASAGIFWRLFIGSLVMLLGGYAGEVGALAVWPAFIIGMAGWLFILWEIFAGEAGKASAEKAPESVKSAFSTMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTCCCACTACAAATGGTAGAATTCTACCTCATACTTGCTGCT---------GTA---GGCGCAGCTTCGGCG---GGCATT------------------------------------TTCTGGCGT---CTTTTCATCGGCTCACTGGTTATGCTGCTCGGAGGATATGCTGGTGAA---------GTT------------------GGT------GCC---------------------------------CTT------------------------------------------------------------------GCAGTT------------------TGGCCAGCG---TTCATTATTGGAATGGCTGGATGGCTGTTCATCTTGTGGGAAATT---------------TTT------GCA---GGAGAAGCAGGCAAGGCCTCAGCAGAA------AAA---GCGCCAGAATCGGTC---AAA---TCA---GCT---TTT---AGC---ACAATG---CGTTTGATCGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GAASA-GI------------FWR-LFIGSLVMLLGGYAGE---V------G--A-----------L----------------------AV------WPA-FIIGMAGWLFILWEI-----F--A-GEAGKASAE--K-APESV-K-S-A-F-S-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927640 [IV-Proteo3-b] PRGD_OTU013_5bd0211be258226d0182b6aa604e3dde gb|KJ927640| PRGD_OTU013_5bd0211be258226d0182b6aa604e3dde, putative proteorhodopsin gene, partial cds. PRGD_OTU013_5bd0211be258226d0182b6aa604e3dde, putative proteorhodopsin gene, partial cds. KJ927640 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-33.28, 45.35) CTGATCACAGTCCCACTACAAATGGTAGAATTTTACCTCATACTTGCTGCTGTAGGCGCAGCTTCGGCGGGCATTTTCTGGCGTCTTTTCATTGGCTCACTGGTTATGCTGCTCGGAGGATATGCTGGTGAAGTTGGTGCCCTTGCAGTTTGGCCAGCGTTCATTATTGGAATGGCTGGATGGCTGTTCATCTTGTGGGAAATTTTTGCAGGAGAAGCAGGCAAGGCCTCAGCAGAAAAAGCGCCAGAATCGGTCAAATCAGCTTTTAGCACAATGCGTTTGATCGTTACAATT LITVPLQMVEFYLILAAVGAASAGIFWRLFIGSLVMLLGGYAGEVGALAVWPAFIIGMAGWLFILWEIFAGEAGKASAEKAPESVKSAFSTMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTCCCACTACAAATGGTAGAATTTTACCTCATACTTGCTGCT---------GTA---GGCGCAGCTTCGGCG---GGCATT------------------------------------TTCTGGCGT---CTTTTCATTGGCTCACTGGTTATGCTGCTCGGAGGATATGCTGGTGAA---------GTT------------------GGT------GCC---------------------------------CTT------------------------------------------------------------------GCAGTT------------------TGGCCAGCG---TTCATTATTGGAATGGCTGGATGGCTGTTCATCTTGTGGGAAATT---------------TTT------GCA---GGAGAAGCAGGCAAGGCCTCAGCAGAA------AAA---GCGCCAGAATCGGTC---AAA---TCA---GCT---TTT---AGC---ACAATG---CGTTTGATCGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GAASA-GI------------FWR-LFIGSLVMLLGGYAGE---V------G--A-----------L----------------------AV------WPA-FIIGMAGWLFILWEI-----F--A-GEAGKASAE--K-APESV-K-S-A-F-S-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927667 [IV-Proteo3-b] PRGD_OTU013_eb310eea84c6f1d5fb0600e7585fb5bf gb|KJ927667| PRGD_OTU013_eb310eea84c6f1d5fb0600e7585fb5bf, putative proteorhodopsin gene, partial cds. PRGD_OTU013_eb310eea84c6f1d5fb0600e7585fb5bf, putative proteorhodopsin gene, partial cds. KJ927667 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) CTGATCACCGTCCCACTTCAAATGGTAGAGTTCTATCTCATACTTGCTGCCGTGGGCGCAGCTTCGGCTGGCATTTTCTGGCGCCTTTTAGTTGGCTCACTGGTTATGCTGCTTGGAGGTTACGCTGGTGAAGTTGGTGCCCTGGCAGTTTGGCCTGCGTTTATTATCGGAATGGCAGGGTGGCTGTTCATTTTGTGGGAAATCTTCGCAGGAGAAGCAGGCAAGGCCTCAGCTGAAAGAGCACCAGAGTCTGTTAAATCAGCATTTAGCACAATGCGTTTGATCGTTACTATC LITVPLQMVEFYLILAAVGAASAGIFWRLLVGSLVMLLGGYAGEVGALAVWPAFIIGMAGWLFILWEIFAGEAGKASAERAPESVKSAFSTMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTCCCACTTCAAATGGTAGAGTTCTATCTCATACTTGCTGCC---------GTG---GGCGCAGCTTCGGCT---GGCATT------------------------------------TTCTGGCGC---CTTTTAGTTGGCTCACTGGTTATGCTGCTTGGAGGTTACGCTGGTGAA---------GTT------------------GGT------GCC---------------------------------CTG------------------------------------------------------------------GCAGTT------------------TGGCCTGCG---TTTATTATCGGAATGGCAGGGTGGCTGTTCATTTTGTGGGAAATC---------------TTC------GCA---GGAGAAGCAGGCAAGGCCTCAGCTGAA------AGA---GCACCAGAGTCTGTT---AAA---TCA---GCA---TTT---AGC---ACAATG---CGTTTGATCGTTACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GAASA-GI------------FWR-LLVGSLVMLLGGYAGE---V------G--A-----------L----------------------AV------WPA-FIIGMAGWLFILWEI-----F--A-GEAGKASAE--R-APESV-K-S-A-F-S-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927618 [IV-Proteo3-b] PRGD_OTU013_otuREP_4b8f75201871e805c0a5d8436b3b8cc2 gb|KJ927618| PRGD_OTU013_otuREP_4b8f75201871e805c0a5d8436b3b8cc2, putative proteorhodopsin gene, partial cds. PRGD_OTU013_otuREP_4b8f75201871e805c0a5d8436b3b8cc2, putative proteorhodopsin gene, partial cds. KJ927618 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTAATTACCGTTCCACTTCAAATGGTAGAGTTTTACCTAATACTTGCAGCTGTAGGTGCAGCTTCGGCTGGTATTTTCTGGCGCCTTTTGATTGGCTCACTAGTTATGCTACTTGGTGGCTATGCTGGTGAAGTAGGTGCCCTCGCAGTTTGGCCTGCGTTTATAATTGGAATGGCTGGCTGGTTGTTCATTTTGTGGGAGATCTTTGCAGGAGAAGCAGGTAAGGCTTCTGCAGAAAAAGCACCAGAGTCGGTCAAATCAGCGTTTAGCACAATGCGCTTAATTGTTACAATC LITVPLQMVEFYLILAAVGAASAGIFWRLLIGSLVMLLGGYAGEVGALAVWPAFIIGMAGWLFILWEIFAGEAGKASAEKAPESVKSAFSTMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACCGTTCCACTTCAAATGGTAGAGTTTTACCTAATACTTGCAGCT---------GTA---GGTGCAGCTTCGGCT---GGTATT------------------------------------TTCTGGCGC---CTTTTGATTGGCTCACTAGTTATGCTACTTGGTGGCTATGCTGGTGAA---------GTA------------------GGT------GCC---------------------------------CTC------------------------------------------------------------------GCAGTT------------------TGGCCTGCG---TTTATAATTGGAATGGCTGGCTGGTTGTTCATTTTGTGGGAGATC---------------TTT------GCA---GGAGAAGCAGGTAAGGCTTCTGCAGAA------AAA---GCACCAGAGTCGGTC---AAA---TCA---GCG---TTT---AGC---ACAATG---CGCTTAATTGTTACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GAASA-GI------------FWR-LLIGSLVMLLGGYAGE---V------G--A-----------L----------------------AV------WPA-FIIGMAGWLFILWEI-----F--A-GEAGKASAE--K-APESV-K-S-A-F-S-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927647 [IV-Proteo3-b] PRGD_OTU013_69df57c76b0510fd3be6ed6984a086b1 gb|KJ927647| PRGD_OTU013_69df57c76b0510fd3be6ed6984a086b1, putative proteorhodopsin gene, partial cds. PRGD_OTU013_69df57c76b0510fd3be6ed6984a086b1, putative proteorhodopsin gene, partial cds. KJ927647 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637), Arctic Ocean-Atlantic side (76.3333, 14.8833), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTCATTACCGTGCCTCTGCAAATGGTAGAGTTCTACCTCATCCTTGCAGCGGTTGGTGCAGCTTCGTCTGGGATATTCTGGCGCCTTTTGGTTGGCTCAGTTGTGATGCTCCTCGGCGGATATTGTGGTGAAGTTGGATACCTAAATGCTTGGGTGGGCTTCATCATCGGAATGGCCGGTTGGTTGTATATCTTGTATGAGATTTTTGCAGGAGAAGCGGGCAAAGCCTCAGCAGATAAGGCACCGGAGTCTGTCAAATCAGCGTTTAGTGCAATGCGTCTGATCGTCACCGTT LITVPLQMVEFYLILAAVGAASSGIFWRLLVGSVVMLLGGYCGEVGYLNAWVGFIIGMAGWLYILYEIFAGEAGKASADKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATTACCGTGCCTCTGCAAATGGTAGAGTTCTACCTCATCCTTGCAGCG---------GTT---GGTGCAGCTTCGTCT---GGGATA------------------------------------TTCTGGCGC---CTTTTGGTTGGCTCAGTTGTGATGCTCCTCGGCGGATATTGTGGTGAA---------GTT------------------GGA------TAC---------------------------------CTA------------------------------------------------------------------AATGCT------------------TGGGTGGGC---TTCATCATCGGAATGGCCGGTTGGTTGTATATCTTGTATGAGATT---------------TTT------GCA---GGAGAAGCGGGCAAAGCCTCAGCAGAT------AAG---GCACCGGAGTCTGTC---AAA---TCA---GCG---TTT---AGT---GCAATG---CGTCTGATCGTCACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GAASS-GI------------FWR-LLVGSVVMLLGGYCGE---V------G--Y-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAD--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927642 [IV-Proteo3-b] PRGD_OTU013_65d059fdd491fc5bf23c4fcc684eee45 gb|KJ927642| PRGD_OTU013_65d059fdd491fc5bf23c4fcc684eee45, putative proteorhodopsin gene, partial cds. PRGD_OTU013_65d059fdd491fc5bf23c4fcc684eee45, putative proteorhodopsin gene, partial cds. KJ927642 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATTACCGTGCCGCTGCAAATGGTAGAATTTTACCTTATCCTTGCGGCTGTTGGCGCAGCTTCCGCTGGAATATTTTGGCGTCTCTTGATTGGTACAGTTGTGATGCTCCTTGGCGGCTACTGTGGTGAAGTTGGTTACCTAAACGCTTGGGTAGGTTTCATCATTGGAATGGCTGGCTGGCTTTATATCCTGTACGAAATCTTTGCAGGGGAAGCGGGCAAAGCATCTGCAGACAAGGCCCCAGAGTCGGTCAAGTCAGCCTTTAGCGCTATGCGTTTGATCGTTACTGTA LITVPLQMVEFYLILAAVGAASAGIFWRLLIGTVVMLLGGYCGEVGYLNAWVGFIIGMAGWLYILYEIFAGEAGKASADKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACCGTGCCGCTGCAAATGGTAGAATTTTACCTTATCCTTGCGGCT---------GTT---GGCGCAGCTTCCGCT---GGAATA------------------------------------TTTTGGCGT---CTCTTGATTGGTACAGTTGTGATGCTCCTTGGCGGCTACTGTGGTGAA---------GTT------------------GGT------TAC---------------------------------CTA------------------------------------------------------------------AACGCT------------------TGGGTAGGT---TTCATCATTGGAATGGCTGGCTGGCTTTATATCCTGTACGAAATC---------------TTT------GCA---GGGGAAGCGGGCAAAGCATCTGCAGAC------AAG---GCCCCAGAGTCGGTC---AAG---TCA---GCC---TTT---AGC---GCTATG---CGTTTGATCGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GAASA-GI------------FWR-LLIGTVVMLLGGYCGE---V------G--Y-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAD--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927661 [IV-Proteo3-b] PRGD_OTU013_cf8b9b0a4c2604445d45ec07d2fbe129 gb|KJ927661| PRGD_OTU013_cf8b9b0a4c2604445d45ec07d2fbe129, putative proteorhodopsin gene, partial cds. PRGD_OTU013_cf8b9b0a4c2604445d45ec07d2fbe129, putative proteorhodopsin gene, partial cds. KJ927661 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATTACCGTGCCACTGCAAATGGTAGAATTTTACCTTATCCTTGCGGCTGTTGGCGCAGCTAGCGCTGGAATATTTTGGCGGCTCTTGATTGGTACAGTTGTGATGCTCCTTGGCGGCTACTGTGGTGAAGTTGGTTACCTAAACGCCTGGGTCGGTTTCATTATTGGAATGGCTGGCTGGCTTTATATCCTTTACGAAATCTTCGCAGGGGAAGCTGGCAAAGCATCTGCAGACAAGGCCCCAGAGTCGGTCAAGTCGGCCTTCAGCGCTATGCGTTTGATCGTTACTGTG LITVPLQMVEFYLILAAVGAASAGIFWRLLIGTVVMLLGGYCGEVGYLNAWVGFIIGMAGWLYILYEIFAGEAGKASADKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACCGTGCCACTGCAAATGGTAGAATTTTACCTTATCCTTGCGGCT---------GTT---GGCGCAGCTAGCGCT---GGAATA------------------------------------TTTTGGCGG---CTCTTGATTGGTACAGTTGTGATGCTCCTTGGCGGCTACTGTGGTGAA---------GTT------------------GGT------TAC---------------------------------CTA------------------------------------------------------------------AACGCC------------------TGGGTCGGT---TTCATTATTGGAATGGCTGGCTGGCTTTATATCCTTTACGAAATC---------------TTC------GCA---GGGGAAGCTGGCAAAGCATCTGCAGAC------AAG---GCCCCAGAGTCGGTC---AAG---TCG---GCC---TTC---AGC---GCTATG---CGTTTGATCGTTACTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GAASA-GI------------FWR-LLIGTVVMLLGGYCGE---V------G--Y-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAD--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927658 [IV-Proteo3-b] PRGD_OTU013_c2faa8686e2e236d983610648829c794 gb|KJ927658| PRGD_OTU013_c2faa8686e2e236d983610648829c794, putative proteorhodopsin gene, partial cds. PRGD_OTU013_c2faa8686e2e236d983610648829c794, putative proteorhodopsin gene, partial cds. KJ927658 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTAATCACTGTTCCACTGCAAATGGTAGAATTTTACCTTATCCTAGCAGCCGTTGGTGCAGCTTCGTCTGGAATATTCTGGCGCCTCTTGATTGGCTCAGTTGTGATGCTCCTTGGCGGCTACTGTGGTGAGGTTGGATACCTAAATGCTTGGGTCGGCTTCATTATTGGAATGGCTGGTTGGTTGTATATATTGTATGAGATTTTTGCAGGAGAAGCAGGCAAAGCCTCAGCTGAAAAGGCCCCAGAGTCAGTCAAATCAGCTTTTAGCGCGATGCGATTGATTGTTACCGTA LITVPLQMVEFYLILAAVGAASSGIFWRLLIGSVVMLLGGYCGEVGYLNAWVGFIIGMAGWLYILYEIFAGEAGKASAEKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTTCCACTGCAAATGGTAGAATTTTACCTTATCCTAGCAGCC---------GTT---GGTGCAGCTTCGTCT---GGAATA------------------------------------TTCTGGCGC---CTCTTGATTGGCTCAGTTGTGATGCTCCTTGGCGGCTACTGTGGTGAG---------GTT------------------GGA------TAC---------------------------------CTA------------------------------------------------------------------AATGCT------------------TGGGTCGGC---TTCATTATTGGAATGGCTGGTTGGTTGTATATATTGTATGAGATT---------------TTT------GCA---GGAGAAGCAGGCAAAGCCTCAGCTGAA------AAG---GCCCCAGAGTCAGTC---AAA---TCA---GCT---TTT---AGC---GCGATG---CGATTGATTGTTACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GAASS-GI------------FWR-LLIGSVVMLLGGYCGE---V------G--Y-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAE--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927657 [IV-Proteo3-b] PRGD_OTU013_b7cd0e54ac8c1721e0b61de18a363aa3 gb|KJ927657| PRGD_OTU013_b7cd0e54ac8c1721e0b61de18a363aa3, putative proteorhodopsin gene, partial cds. PRGD_OTU013_b7cd0e54ac8c1721e0b61de18a363aa3, putative proteorhodopsin gene, partial cds. KJ927657 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATTACTGTGCCGCTGCAAATGGTAGAATTCTACCTTATCCTTGCAGCAGTTGGTGTAGCTTCGGCTGGAATATTCTGGCGCCTTTTAATTGGTTCAGTTGTGATGCTCCTTGGCGGCTACTGTGGTGAAGTCGGGTACCTGAACGCCTGGGTCGGTTTCATCATCGGAATGGCTGGCTGGCTATATATCCTGTATGAGATTTTTGCGGGAGAAGCGGGCAAAGCTTCAGCAGAGAAGGCCCCAGAGTCGGTCAAATCAGCTTTCAGCGCGATGCGTCTGATTGTTACCGTA LITVPLQMVEFYLILAAVGVASAGIFWRLLIGSVVMLLGGYCGEVGYLNAWVGFIIGMAGWLYILYEIFAGEAGKASAEKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTGCCGCTGCAAATGGTAGAATTCTACCTTATCCTTGCAGCA---------GTT---GGTGTAGCTTCGGCT---GGAATA------------------------------------TTCTGGCGC---CTTTTAATTGGTTCAGTTGTGATGCTCCTTGGCGGCTACTGTGGTGAA---------GTC------------------GGG------TAC---------------------------------CTG------------------------------------------------------------------AACGCC------------------TGGGTCGGT---TTCATCATCGGAATGGCTGGCTGGCTATATATCCTGTATGAGATT---------------TTT------GCG---GGAGAAGCGGGCAAAGCTTCAGCAGAG------AAG---GCCCCAGAGTCGGTC---AAA---TCA---GCT---TTC---AGC---GCGATG---CGTCTGATTGTTACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GVASA-GI------------FWR-LLIGSVVMLLGGYCGE---V------G--Y-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAE--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927630 [IV-Proteo3-b] PRGD_OTU013_2ee4f9822cb864a2ea17c680d2fd7ac3 gb|KJ927630| PRGD_OTU013_2ee4f9822cb864a2ea17c680d2fd7ac3, putative proteorhodopsin gene, partial cds. PRGD_OTU013_2ee4f9822cb864a2ea17c680d2fd7ac3, putative proteorhodopsin gene, partial cds. KJ927630 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) CTAATTACTGTGCCGCTGCAAATGGTAGAATTCTACCTCATCCTTGCAGCAGTTGGTGTAGCTTCGGCAGGAATATTCTGGCGCCTTTTAATTGGTTCAGTTGTGATGCTCCTTGGCGGCTACTGTGGTGAAGTCGGTTACCTGAACGCCTGGGTTGGTTTCATCATCGGAATGGCTGGCTGGCTGTATATCCTGTATGAGATTTTTGCGGGAGAAGCGGGCAAAGCTTCAGCAGAGAAGGCCCCAGAGTCGGTCAAATCAGCTTTCAGCGCGATGCGTCTGATTGTTACCGTA LITVPLQMVEFYLILAAVGVASAGIFWRLLIGSVVMLLGGYCGEVGYLNAWVGFIIGMAGWLYILYEIFAGEAGKASAEKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTGCCGCTGCAAATGGTAGAATTCTACCTCATCCTTGCAGCA---------GTT---GGTGTAGCTTCGGCA---GGAATA------------------------------------TTCTGGCGC---CTTTTAATTGGTTCAGTTGTGATGCTCCTTGGCGGCTACTGTGGTGAA---------GTC------------------GGT------TAC---------------------------------CTG------------------------------------------------------------------AACGCC------------------TGGGTTGGT---TTCATCATCGGAATGGCTGGCTGGCTGTATATCCTGTATGAGATT---------------TTT------GCG---GGAGAAGCGGGCAAAGCTTCAGCAGAG------AAG---GCCCCAGAGTCGGTC---AAA---TCA---GCT---TTC---AGC---GCGATG---CGTCTGATTGTTACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GVASA-GI------------FWR-LLIGSVVMLLGGYCGE---V------G--Y-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAE--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927662 [IV-Proteo3-b] PRGD_OTU013_d1021ca293f754a4c715ba28de47425b gb|KJ927662| PRGD_OTU013_d1021ca293f754a4c715ba28de47425b, putative proteorhodopsin gene, partial cds. PRGD_OTU013_d1021ca293f754a4c715ba28de47425b, putative proteorhodopsin gene, partial cds. KJ927662 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Indian Ocean (-33.28, 45.35) CTAATTACTGTGCCGCTGCAAATGGTAGAATTCTACCTCATCCTTGCAGCAGTTGGTGTAGCTTCGGCTGGAATATTCTGGCGCCTTTTAATTGGCTCAGTTGTGATGCTTCTTGGCGGCTACTGTGGTGAAGTCGGGTACCTGAACGCCTGGGTTGGTTTCATCATCGGAATGGCTGGCTGGCTGTATATCCTGTATGAGATTTTTGCGGGAGAAGCGGGCAAAGCTTCAGCAGAGAAGGCCCCAGAGTCGGTCAAATCAGCTTTCAGCGCGATGCGTCTGATTGTTACCGTA LITVPLQMVEFYLILAAVGVASAGIFWRLLIGSVVMLLGGYCGEVGYLNAWVGFIIGMAGWLYILYEIFAGEAGKASAEKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTGCCGCTGCAAATGGTAGAATTCTACCTCATCCTTGCAGCA---------GTT---GGTGTAGCTTCGGCT---GGAATA------------------------------------TTCTGGCGC---CTTTTAATTGGCTCAGTTGTGATGCTTCTTGGCGGCTACTGTGGTGAA---------GTC------------------GGG------TAC---------------------------------CTG------------------------------------------------------------------AACGCC------------------TGGGTTGGT---TTCATCATCGGAATGGCTGGCTGGCTGTATATCCTGTATGAGATT---------------TTT------GCG---GGAGAAGCGGGCAAAGCTTCAGCAGAG------AAG---GCCCCAGAGTCGGTC---AAA---TCA---GCT---TTC---AGC---GCGATG---CGTCTGATTGTTACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GVASA-GI------------FWR-LLIGSVVMLLGGYCGE---V------G--Y-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAE--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927644 [IV-Proteo3-b] PRGD_OTU013_68eb221a6d26031734c9a74a43158583 gb|KJ927644| PRGD_OTU013_68eb221a6d26031734c9a74a43158583, putative proteorhodopsin gene, partial cds. PRGD_OTU013_68eb221a6d26031734c9a74a43158583, putative proteorhodopsin gene, partial cds. KJ927644 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTAATTACTGTGCCGCTGCAAATGGTAGAATTCTACCTTATCCTCGCAGCGGTTGGTGTAGCTTCGGCTGGAATATTCTGGCGCCTTTTGATTGGCTCAGTTGTGATGCTCCTTGGCGGCTACTGTGGTGAAGTCGGGTACCTGAACGCCTGGGTTGGTTTCATCATCGGAATGGCTGGTTGGTTGTATATTCTGTATGAGATTTTTGCAGGAGAAGCAGGCAAAGCCTCAGCCGAAAAGGCCCCAGAGTCGGTCAAATCAGCTTTCAGCGCGATGCGTCTGATTGTTACCGTA LITVPLQMVEFYLILAAVGVASAGIFWRLLIGSVVMLLGGYCGEVGYLNAWVGFIIGMAGWLYILYEIFAGEAGKASAEKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCGCTGCAAATGGTAGAATTCTACCTTATCCTCGCAGCG---------GTT---GGTGTAGCTTCGGCT---GGAATA------------------------------------TTCTGGCGC---CTTTTGATTGGCTCAGTTGTGATGCTCCTTGGCGGCTACTGTGGTGAA---------GTC------------------GGG------TAC---------------------------------CTG------------------------------------------------------------------AACGCC------------------TGGGTTGGT---TTCATCATCGGAATGGCTGGTTGGTTGTATATTCTGTATGAGATT---------------TTT------GCA---GGAGAAGCAGGCAAAGCCTCAGCCGAA------AAG---GCCCCAGAGTCGGTC---AAA---TCA---GCT---TTC---AGC---GCGATG---CGTCTGATTGTTACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GVASA-GI------------FWR-LLIGSVVMLLGGYCGE---V------G--Y-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAE--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927654 [IV-Proteo3-b] PRGD_OTU013_9f8134c94a73d2dc9a445f62d38c8c1d gb|KJ927654| PRGD_OTU013_9f8134c94a73d2dc9a445f62d38c8c1d, putative proteorhodopsin gene, partial cds. PRGD_OTU013_9f8134c94a73d2dc9a445f62d38c8c1d, putative proteorhodopsin gene, partial cds. KJ927654 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATCACTGTGCCGCTGCAAATGGTAGAATTCTACCTTATCCTTGCAGCAGTTGGTGTAGCTTCGGCTGGTATATTCTGGCGCCTTTTGATTGGCTCAGTCGTAATGCTCCTTGGCGGCTACTGTGGTGAAGTTGGGTACCTGAACGCCTGGGTTGGTTTCATTATCGGAATGGCTGGTTGGTTATATATTCTGTATGAAATTTTTGCAGGAGAAGCAGGCAAAGCCTCAGCAGAGAAGGCCCCAGAGTCGGTCAAATCAGCTTTCAGCGCGATGCGTCTGATTGTTACCGTA LITVPLQMVEFYLILAAVGVASAGIFWRLLIGSVVMLLGGYCGEVGYLNAWVGFIIGMAGWLYILYEIFAGEAGKASAEKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACTGTGCCGCTGCAAATGGTAGAATTCTACCTTATCCTTGCAGCA---------GTT---GGTGTAGCTTCGGCT---GGTATA------------------------------------TTCTGGCGC---CTTTTGATTGGCTCAGTCGTAATGCTCCTTGGCGGCTACTGTGGTGAA---------GTT------------------GGG------TAC---------------------------------CTG------------------------------------------------------------------AACGCC------------------TGGGTTGGT---TTCATTATCGGAATGGCTGGTTGGTTATATATTCTGTATGAAATT---------------TTT------GCA---GGAGAAGCAGGCAAAGCCTCAGCAGAG------AAG---GCCCCAGAGTCGGTC---AAA---TCA---GCT---TTC---AGC---GCGATG---CGTCTGATTGTTACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GVASA-GI------------FWR-LLIGSVVMLLGGYCGE---V------G--Y-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAE--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927651 [IV-Proteo3-b] PRGD_OTU013_83aa342dc25c64d2279434c9ad1efda8 gb|KJ927651| PRGD_OTU013_83aa342dc25c64d2279434c9ad1efda8, putative proteorhodopsin gene, partial cds. PRGD_OTU013_83aa342dc25c64d2279434c9ad1efda8, putative proteorhodopsin gene, partial cds. KJ927651 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTGATTACTGTGCCGCTGCAAATGGTAGAATTCTACCTTATCCTTGCAGCAGTTGGTGTAGCTTCGGCCGGTATATTCTGGCGCCTTTTGATTGGCTCAGTTGTGATGCTCCTTGGCGGTTACTGTGGTGAAGTCGGGTACCTGAACGCCTGGGTTGGTTTCATCATCGGGATGGCTGGCTGGCTGTATATCCTGTATGAGATTTTTGCGGGAGAAGCGGGCAAAGCCTCAGCAGAGAAGGCCCCAGAGTCGGTTAAATCAGCTTTCAGCGCGATGCGTCTGATTGTTACCGTG LITVPLQMVEFYLILAAVGVASAGIFWRLLIGSVVMLLGGYCGEVGYLNAWVGFIIGMAGWLYILYEIFAGEAGKASAEKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTGCCGCTGCAAATGGTAGAATTCTACCTTATCCTTGCAGCA---------GTT---GGTGTAGCTTCGGCC---GGTATA------------------------------------TTCTGGCGC---CTTTTGATTGGCTCAGTTGTGATGCTCCTTGGCGGTTACTGTGGTGAA---------GTC------------------GGG------TAC---------------------------------CTG------------------------------------------------------------------AACGCC------------------TGGGTTGGT---TTCATCATCGGGATGGCTGGCTGGCTGTATATCCTGTATGAGATT---------------TTT------GCG---GGAGAAGCGGGCAAAGCCTCAGCAGAG------AAG---GCCCCAGAGTCGGTT---AAA---TCA---GCT---TTC---AGC---GCGATG---CGTCTGATTGTTACCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GVASA-GI------------FWR-LLIGSVVMLLGGYCGE---V------G--Y-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAE--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927638 [IV-Proteo3-b] PRGD_OTU013_553d8568c39f0193dcd6138b4eafb953 gb|KJ927638| PRGD_OTU013_553d8568c39f0193dcd6138b4eafb953, putative proteorhodopsin gene, partial cds. PRGD_OTU013_553d8568c39f0193dcd6138b4eafb953, putative proteorhodopsin gene, partial cds. KJ927638 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTCATCACTGTGCCGCTGCAAATGGTCGAATTCTACCTTATCCTTGCAGCAGTTGGTGTAGCTTCGGCTGGAATATTCTGGCGCCTTTTGATTGGCTCTGTTGTAATGCTCCTTGGCGGCTACTGTGGTGAAGTCGGGTACCTGAACGCCTGGGTTGGTTTCATCATCGGAATGGCTGGCTGGCTGTATATCCTGTACGAGATTTTTGCGGGAGAAGCGGGCAAAGCCTCAGCAGAGAAGGCCCCAGAGTCGGTCAAATCAGCTTTCAGCGCGATGCGCTTGATTGTTACCGTA LITVPLQMVEFYLILAAVGVASAGIFWRLLIGSVVMLLGGYCGEVGYLNAWVGFIIGMAGWLYILYEIFAGEAGKASAEKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACTGTGCCGCTGCAAATGGTCGAATTCTACCTTATCCTTGCAGCA---------GTT---GGTGTAGCTTCGGCT---GGAATA------------------------------------TTCTGGCGC---CTTTTGATTGGCTCTGTTGTAATGCTCCTTGGCGGCTACTGTGGTGAA---------GTC------------------GGG------TAC---------------------------------CTG------------------------------------------------------------------AACGCC------------------TGGGTTGGT---TTCATCATCGGAATGGCTGGCTGGCTGTATATCCTGTACGAGATT---------------TTT------GCG---GGAGAAGCGGGCAAAGCCTCAGCAGAG------AAG---GCCCCAGAGTCGGTC---AAA---TCA---GCT---TTC---AGC---GCGATG---CGCTTGATTGTTACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GVASA-GI------------FWR-LLIGSVVMLLGGYCGE---V------G--Y-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAE--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927650 [IV-Proteo3-b] PRGD_OTU013_8384d21edd84ce68523ba81e546b7bd5 gb|KJ927650| PRGD_OTU013_8384d21edd84ce68523ba81e546b7bd5, putative proteorhodopsin gene, partial cds. PRGD_OTU013_8384d21edd84ce68523ba81e546b7bd5, putative proteorhodopsin gene, partial cds. KJ927650 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -33.28, 45.35) CTAATCACCGTTCCACTCCAAATGGTAGAATTTTACCTTATCCTTGCAGCAGTTGGTGTAGCTTCGGCTGGGATATTCTGGCGCCTTTTAATTGGCTCAGTCGTAATGCTACTTGGCGGCTACTGTGGTGAAGTCGGGTACCTGAACGCCTGGGTTGGTTTCATCATCGGGATGGCCGGCTGGCTGTATATCCTGTACGAGATTTTTGCGGGAGAAGCGGGCAAAGCCTCAGCAGAGAAGGCCCCAGAGTCGGTCAAATCAGCTTTCAGCGCGATGCGCTTGATTGTTACCGTA LITVPLQMVEFYLILAAVGVASAGIFWRLLIGSVVMLLGGYCGEVGYLNAWVGFIIGMAGWLYILYEIFAGEAGKASAEKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACCGTTCCACTCCAAATGGTAGAATTTTACCTTATCCTTGCAGCA---------GTT---GGTGTAGCTTCGGCT---GGGATA------------------------------------TTCTGGCGC---CTTTTAATTGGCTCAGTCGTAATGCTACTTGGCGGCTACTGTGGTGAA---------GTC------------------GGG------TAC---------------------------------CTG------------------------------------------------------------------AACGCC------------------TGGGTTGGT---TTCATCATCGGGATGGCCGGCTGGCTGTATATCCTGTACGAGATT---------------TTT------GCG---GGAGAAGCGGGCAAAGCCTCAGCAGAG------AAG---GCCCCAGAGTCGGTC---AAA---TCA---GCT---TTC---AGC---GCGATG---CGCTTGATTGTTACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GVASA-GI------------FWR-LLIGSVVMLLGGYCGE---V------G--Y-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAE--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927652 [IV-Proteo3-b] PRGD_OTU013_8833efd3c50a97c1374fff6ad0123f4e gb|KJ927652| PRGD_OTU013_8833efd3c50a97c1374fff6ad0123f4e, putative proteorhodopsin gene, partial cds. PRGD_OTU013_8833efd3c50a97c1374fff6ad0123f4e, putative proteorhodopsin gene, partial cds. KJ927652 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTAATTACCGTGCCACTCCAAATGGTAGAATTCTACCTTATCCTTGCAGCAGTTGGTGTAGCTTCGGCTGGGATATTCTGGCGCCTTTTAATTGGCTCAGTCGTAATGCTCCTTGGCGGCTACTGTGGTGAAGTCGGGTACCTGAACGCCTGGGTTGGTTTCATCATCGGGATGGCCGGCTGGCTGTATATCCTGTACGAGATTTTTGCGGGAGAAGCGGGCAAAGCCTCGGCAGAGAAGGCCCCAGAGTCGGTCAAATCAGCTTTCAGCGCGATGCGCTTGATTGTTACCGTA LITVPLQMVEFYLILAAVGVASAGIFWRLLIGSVVMLLGGYCGEVGYLNAWVGFIIGMAGWLYILYEIFAGEAGKASAEKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACCGTGCCACTCCAAATGGTAGAATTCTACCTTATCCTTGCAGCA---------GTT---GGTGTAGCTTCGGCT---GGGATA------------------------------------TTCTGGCGC---CTTTTAATTGGCTCAGTCGTAATGCTCCTTGGCGGCTACTGTGGTGAA---------GTC------------------GGG------TAC---------------------------------CTG------------------------------------------------------------------AACGCC------------------TGGGTTGGT---TTCATCATCGGGATGGCCGGCTGGCTGTATATCCTGTACGAGATT---------------TTT------GCG---GGAGAAGCGGGCAAAGCCTCGGCAGAG------AAG---GCCCCAGAGTCGGTC---AAA---TCA---GCT---TTC---AGC---GCGATG---CGCTTGATTGTTACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GVASA-GI------------FWR-LLIGSVVMLLGGYCGE---V------G--Y-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAE--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927655 [IV-Proteo3-b] PRGD_OTU013_b48c993931798cf228fb23a379a89ce0 gb|KJ927655| PRGD_OTU013_b48c993931798cf228fb23a379a89ce0, putative proteorhodopsin gene, partial cds. PRGD_OTU013_b48c993931798cf228fb23a379a89ce0, putative proteorhodopsin gene, partial cds. KJ927655 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATTACCGTGCCACTCCAAATGGTAGAATTCTACCTGATCCTTGCGGCTGTCGGCGCAGCCTCCTCCGGAATATTCTGGCGCCTTTTGATTGGCACAGTCGTAATGCTCCTTGGCGGCTACTGTGGTGAAGTCGGCTACCTGAACGCCTGGGTAGGTTTCATCATCGGAATGGCTGGCTGGCTGTATATCCTGTATGAGATTTTTGCAGGAGAAGCGGGCAAAGCATCAGCAGACAAAGCTCCAGAGTCGGTCAAATCAGCTTTTAGTGCGATGCGCTTGATCGTTACCGTA LITVPLQMVEFYLILAAVGAASSGIFWRLLIGTVVMLLGGYCGEVGYLNAWVGFIIGMAGWLYILYEIFAGEAGKASADKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACCGTGCCACTCCAAATGGTAGAATTCTACCTGATCCTTGCGGCT---------GTC---GGCGCAGCCTCCTCC---GGAATA------------------------------------TTCTGGCGC---CTTTTGATTGGCACAGTCGTAATGCTCCTTGGCGGCTACTGTGGTGAA---------GTC------------------GGC------TAC---------------------------------CTG------------------------------------------------------------------AACGCC------------------TGGGTAGGT---TTCATCATCGGAATGGCTGGCTGGCTGTATATCCTGTATGAGATT---------------TTT------GCA---GGAGAAGCGGGCAAAGCATCAGCAGAC------AAA---GCTCCAGAGTCGGTC---AAA---TCA---GCT---TTT---AGT---GCGATG---CGCTTGATCGTTACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GAASS-GI------------FWR-LLIGTVVMLLGGYCGE---V------G--Y-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAD--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927668 [IV-Proteo3-b] PRGD_OTU013_fad5d0bec7570b6ca5c08a6eebf5149d gb|KJ927668| PRGD_OTU013_fad5d0bec7570b6ca5c08a6eebf5149d, putative proteorhodopsin gene, partial cds. PRGD_OTU013_fad5d0bec7570b6ca5c08a6eebf5149d, putative proteorhodopsin gene, partial cds. KJ927668 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Indian Ocean (-14.48, 113.45) CTAATTACTGTGCCGCTGCAAATGGTAGAATTCTACCTGATCCTTGCGGCTGTCGGCGCAGCCTCCTCCGGAATATTCTGGCGCCTTTTGATTGGCACAGTCGTAATGCTCCTTGGCGGCTACTGTGGTGAAGTCGGCTACCTGAACGCCTGGGTAGGTTTCATCATCGGAATGGCTGGCTGGCTGTATATCCTGTATGAGATTTTTGCAGGAGAAGCGGGCAAAGCATCAGCAGACAAAGCTCCAGAGTCGGTCAAATCAGCTTTTAGTGCGATGCGCTTGATCGTTACCGTA LITVPLQMVEFYLILAAVGAASSGIFWRLLIGTVVMLLGGYCGEVGYLNAWVGFIIGMAGWLYILYEIFAGEAGKASADKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTGCCGCTGCAAATGGTAGAATTCTACCTGATCCTTGCGGCT---------GTC---GGCGCAGCCTCCTCC---GGAATA------------------------------------TTCTGGCGC---CTTTTGATTGGCACAGTCGTAATGCTCCTTGGCGGCTACTGTGGTGAA---------GTC------------------GGC------TAC---------------------------------CTG------------------------------------------------------------------AACGCC------------------TGGGTAGGT---TTCATCATCGGAATGGCTGGCTGGCTGTATATCCTGTATGAGATT---------------TTT------GCA---GGAGAAGCGGGCAAAGCATCAGCAGAC------AAA---GCTCCAGAGTCGGTC---AAA---TCA---GCT---TTT---AGT---GCGATG---CGCTTGATCGTTACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GAASS-GI------------FWR-LLIGTVVMLLGGYCGE---V------G--Y-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAD--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927628 [IV-Proteo3-b] PRGD_OTU013_278b20fdae27733f005f3c9c07b0d96f gb|KJ927628| PRGD_OTU013_278b20fdae27733f005f3c9c07b0d96f, putative proteorhodopsin gene, partial cds. PRGD_OTU013_278b20fdae27733f005f3c9c07b0d96f, putative proteorhodopsin gene, partial cds. KJ927628 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATTACCGTGCCACTCCAAATGGTAGAATTCTACCTGATCCTTGCGGCTGTCGGCGCAGCTTCCTCCGGAATATTCTGGCGCCTTTTAATTGGCACAGTCGTAATGCTCCTTGGCGGCTACTGTGGTGAAGTCGGCTACTTGAACGCCTGGGTAGGTTTCATCATCGGAATGGCTGGCTGGCTCTATATCCTGTATGAGATTTTTGCAGGAGAAGCGGGCAAAGCATCAGCAGACAAAGCTCCAGAGTCGGTCAAATCAGCTTTTAGTGCGATGCGCTTGATCGTTACCGTA LITVPLQMVEFYLILAAVGAASSGIFWRLLIGTVVMLLGGYCGEVGYLNAWVGFIIGMAGWLYILYEIFAGEAGKASADKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACCGTGCCACTCCAAATGGTAGAATTCTACCTGATCCTTGCGGCT---------GTC---GGCGCAGCTTCCTCC---GGAATA------------------------------------TTCTGGCGC---CTTTTAATTGGCACAGTCGTAATGCTCCTTGGCGGCTACTGTGGTGAA---------GTC------------------GGC------TAC---------------------------------TTG------------------------------------------------------------------AACGCC------------------TGGGTAGGT---TTCATCATCGGAATGGCTGGCTGGCTCTATATCCTGTATGAGATT---------------TTT------GCA---GGAGAAGCGGGCAAAGCATCAGCAGAC------AAA---GCTCCAGAGTCGGTC---AAA---TCA---GCT---TTT---AGT---GCGATG---CGCTTGATCGTTACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GAASS-GI------------FWR-LLIGTVVMLLGGYCGE---V------G--Y-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAD--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927664 [IV-Proteo3-b] PRGD_OTU013_dec8502c19240d154a66d7f3bc26edf7 gb|KJ927664| PRGD_OTU013_dec8502c19240d154a66d7f3bc26edf7, putative proteorhodopsin gene, partial cds. PRGD_OTU013_dec8502c19240d154a66d7f3bc26edf7, putative proteorhodopsin gene, partial cds. KJ927664 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATTACTGTGCCACTCCAAATGGTAGAATTCTACCTAATCCTTGCGGCTGTCGGCGCAGCTTCCTCAGGAATTTTCTGGCGCCTTTTAATTGGCACAGTCGTAATGCTCCTTGGCGGCTACTGTGGTGAAGTCGGCTACCTGAACGCCTGGGTAGGTTTCATAATCGGAATGGCTGGCTGGCTGTATATCCTGTATGAGATTTTTGCAGGAGAAGCGGGCAAAGCATCAGCGGACAAAGCCCCAGAGTCGGTCAAGTCAGCTTTTAGTGCGATGCGCTTGATCGTTACCGTA LITVPLQMVEFYLILAAVGAASSGIFWRLLIGTVVMLLGGYCGEVGYLNAWVGFIIGMAGWLYILYEIFAGEAGKASADKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTGCCACTCCAAATGGTAGAATTCTACCTAATCCTTGCGGCT---------GTC---GGCGCAGCTTCCTCA---GGAATT------------------------------------TTCTGGCGC---CTTTTAATTGGCACAGTCGTAATGCTCCTTGGCGGCTACTGTGGTGAA---------GTC------------------GGC------TAC---------------------------------CTG------------------------------------------------------------------AACGCC------------------TGGGTAGGT---TTCATAATCGGAATGGCTGGCTGGCTGTATATCCTGTATGAGATT---------------TTT------GCA---GGAGAAGCGGGCAAAGCATCAGCGGAC------AAA---GCCCCAGAGTCGGTC---AAG---TCA---GCT---TTT---AGT---GCGATG---CGCTTGATCGTTACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GAASS-GI------------FWR-LLIGTVVMLLGGYCGE---V------G--Y-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAD--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927669 [IV-Proteo3-b] PRGD_OTU013_fc744832ba2b06af10a1f15648a208ed gb|KJ927669| PRGD_OTU013_fc744832ba2b06af10a1f15648a208ed, putative proteorhodopsin gene, partial cds. PRGD_OTU013_fc744832ba2b06af10a1f15648a208ed, putative proteorhodopsin gene, partial cds. KJ927669 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTAATTACTGTGCCACTCCAAATGGTAGAATTCTACCTGATCCTTGCGGCTGTCGGCGCAGCTTCCTCCGGAATTTTCTGGCGCCTTTTAATTGGCACAGTCGTAATGCTCCTTGGCGGCTACTGTGGTGAAGTCGGCTACCTGAACGCCTGGGTAGGTTTCATCATCGGAATGGCTGGCTGGCTGTATATCCTGTATGAGATTTTTGCAGGAGAAGCGGGCAAAGCATCAGCAGACAAAGCCCCAGAGTCGGTCAAGTCAGCTTTTAGTGCGATGCGCTTGATCGTTACCGTA LITVPLQMVEFYLILAAVGAASSGIFWRLLIGTVVMLLGGYCGEVGYLNAWVGFIIGMAGWLYILYEIFAGEAGKASADKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTGCCACTCCAAATGGTAGAATTCTACCTGATCCTTGCGGCT---------GTC---GGCGCAGCTTCCTCC---GGAATT------------------------------------TTCTGGCGC---CTTTTAATTGGCACAGTCGTAATGCTCCTTGGCGGCTACTGTGGTGAA---------GTC------------------GGC------TAC---------------------------------CTG------------------------------------------------------------------AACGCC------------------TGGGTAGGT---TTCATCATCGGAATGGCTGGCTGGCTGTATATCCTGTATGAGATT---------------TTT------GCA---GGAGAAGCGGGCAAAGCATCAGCAGAC------AAA---GCCCCAGAGTCGGTC---AAG---TCA---GCT---TTT---AGT---GCGATG---CGCTTGATCGTTACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GAASS-GI------------FWR-LLIGTVVMLLGGYCGE---V------G--Y-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAD--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927663 [IV-Proteo3-b] PRGD_OTU013_d4078424e438d9e4c97c2f8c88931ccb gb|KJ927663| PRGD_OTU013_d4078424e438d9e4c97c2f8c88931ccb, putative proteorhodopsin gene, partial cds. PRGD_OTU013_d4078424e438d9e4c97c2f8c88931ccb, putative proteorhodopsin gene, partial cds. KJ927663 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATTACCGTGCCACTTCAAATGGTAGAATTCTACCTGATCCTTGCGGCTGTTGGCGCAGCTTCCTCAGGAATATTCTGGCGCCTTTTAATTGGCACAGTTGTAATGCTCCTAGGCGGATACTGTGGTGAAGTCGGCTACCTGAACGCCTGGGTAGGTTTCATCATCGGAATGGCTGGCTGGCTTTATATCCTGTATGAGATTTTTGCGGGAGAAGCGGGCAAAGCATCAGCAGACAAAGCCCCCGAGTCGGTCAAATCAGCTTTTAGCGCGATGCGCTTGATCGTTACCGTA LITVPLQMVEFYLILAAVGAASSGIFWRLLIGTVVMLLGGYCGEVGYLNAWVGFIIGMAGWLYILYEIFAGEAGKASADKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACCGTGCCACTTCAAATGGTAGAATTCTACCTGATCCTTGCGGCT---------GTT---GGCGCAGCTTCCTCA---GGAATA------------------------------------TTCTGGCGC---CTTTTAATTGGCACAGTTGTAATGCTCCTAGGCGGATACTGTGGTGAA---------GTC------------------GGC------TAC---------------------------------CTG------------------------------------------------------------------AACGCC------------------TGGGTAGGT---TTCATCATCGGAATGGCTGGCTGGCTTTATATCCTGTATGAGATT---------------TTT------GCG---GGAGAAGCGGGCAAAGCATCAGCAGAC------AAA---GCCCCCGAGTCGGTC---AAA---TCA---GCT---TTT---AGC---GCGATG---CGCTTGATCGTTACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GAASS-GI------------FWR-LLIGTVVMLLGGYCGE---V------G--Y-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAD--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927626 [IV-Proteo3-b] PRGD_OTU013_19eb4674ac6ff90ff27c27dbbe99d91c gb|KJ927626| PRGD_OTU013_19eb4674ac6ff90ff27c27dbbe99d91c, putative proteorhodopsin gene, partial cds. PRGD_OTU013_19eb4674ac6ff90ff27c27dbbe99d91c, putative proteorhodopsin gene, partial cds. KJ927626 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTAATTACCGTGCCACTCCAAATGGTAGAATTCTACCTGATCCTTGCGGCTGTTGGCGCAGCTTCCTCTGGAATATTCTGGCGCCTTTTGATTGGCACAGTTGTAATGCTCCTTGGCGGCTACTGTGGTGAGGTCGGCTACCTGAACGCGTGGGTAGGTTTCATCATCGGAATGGCCGGCTGGCTATATATCCTGTATGAGATTTTTGCGGGAGAAGCGGGCAAAGCATCAGCAGACAAAGCCCCAGAGTCGGTCAAATCCGCTTTTAGCGCGATGCGCTTGATCGTTACCGTA LITVPLQMVEFYLILAAVGAASSGIFWRLLIGTVVMLLGGYCGEVGYLNAWVGFIIGMAGWLYILYEIFAGEAGKASADKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACCGTGCCACTCCAAATGGTAGAATTCTACCTGATCCTTGCGGCT---------GTT---GGCGCAGCTTCCTCT---GGAATA------------------------------------TTCTGGCGC---CTTTTGATTGGCACAGTTGTAATGCTCCTTGGCGGCTACTGTGGTGAG---------GTC------------------GGC------TAC---------------------------------CTG------------------------------------------------------------------AACGCG------------------TGGGTAGGT---TTCATCATCGGAATGGCCGGCTGGCTATATATCCTGTATGAGATT---------------TTT------GCG---GGAGAAGCGGGCAAAGCATCAGCAGAC------AAA---GCCCCAGAGTCGGTC---AAA---TCC---GCT---TTT---AGC---GCGATG---CGCTTGATCGTTACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GAASS-GI------------FWR-LLIGTVVMLLGGYCGE---V------G--Y-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAD--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927636 [IV-Proteo3-b] PRGD_OTU013_470616aed3420feeaa07e8d5c37a1b4e gb|KJ927636| PRGD_OTU013_470616aed3420feeaa07e8d5c37a1b4e, putative proteorhodopsin gene, partial cds. PRGD_OTU013_470616aed3420feeaa07e8d5c37a1b4e, putative proteorhodopsin gene, partial cds. KJ927636 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATTACCGTGCCACTCCAAATGGTAGAATTCTACCTGATCCTTGCGGCCGTTGGTGCAGCTTCCTCCGGAATATTCTGGCGCCTTTTGATTGGCACAGTTGTAATGCTCCTTGGTGGCTACTGTGGTGAGGTCGGCTACCTGAACGCCTGGGTAGGTTTCATCATCGGAATGGCCGGCTGGCTGTATATCCTGTACGAGATTTTTGCGGGAGAAGCAGGCAAAGCATCAGCAGACAAAGCCCCAGAATCGGTCAAATCAGCTTTTAGTGCGATGCGCTTGATCGTTACCGTA LITVPLQMVEFYLILAAVGAASSGIFWRLLIGTVVMLLGGYCGEVGYLNAWVGFIIGMAGWLYILYEIFAGEAGKASADKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACCGTGCCACTCCAAATGGTAGAATTCTACCTGATCCTTGCGGCC---------GTT---GGTGCAGCTTCCTCC---GGAATA------------------------------------TTCTGGCGC---CTTTTGATTGGCACAGTTGTAATGCTCCTTGGTGGCTACTGTGGTGAG---------GTC------------------GGC------TAC---------------------------------CTG------------------------------------------------------------------AACGCC------------------TGGGTAGGT---TTCATCATCGGAATGGCCGGCTGGCTGTATATCCTGTACGAGATT---------------TTT------GCG---GGAGAAGCAGGCAAAGCATCAGCAGAC------AAA---GCCCCAGAATCGGTC---AAA---TCA---GCT---TTT---AGT---GCGATG---CGCTTGATCGTTACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GAASS-GI------------FWR-LLIGTVVMLLGGYCGE---V------G--Y-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAD--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927637 [IV-Proteo3-b] PRGD_OTU013_51bb760ae31d8c1dc2780d5afe282007 gb|KJ927637| PRGD_OTU013_51bb760ae31d8c1dc2780d5afe282007, putative proteorhodopsin gene, partial cds. PRGD_OTU013_51bb760ae31d8c1dc2780d5afe282007, putative proteorhodopsin gene, partial cds. KJ927637 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTAATCACCGTTCCACTCCAAATGGTAGAATTTTACCTGATCCTTGCGGCTGTTGGCGCAGCTTCCTCAGGAATATTCTGGCGCCTTTTAATTGGCACAGTTGTGATGCTCCTTGGCGGCTACTGTGGTGAAGTCGGGTACCTGAATGCCTGGGTAGGTTTCATCATCGGAATGGCTGGCTGGCTGTACATCCTGTATGAGATTTTTGCGGGGGAAGCAGGCAAAGCATCAGCAGACAAGGCCCCAGAGTCGGTCAAATCAGCTTTTAGTGCGATGCGCTTGATTGTTACCGTA LITVPLQMVEFYLILAAVGAASSGIFWRLLIGTVVMLLGGYCGEVGYLNAWVGFIIGMAGWLYILYEIFAGEAGKASADKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACCGTTCCACTCCAAATGGTAGAATTTTACCTGATCCTTGCGGCT---------GTT---GGCGCAGCTTCCTCA---GGAATA------------------------------------TTCTGGCGC---CTTTTAATTGGCACAGTTGTGATGCTCCTTGGCGGCTACTGTGGTGAA---------GTC------------------GGG------TAC---------------------------------CTG------------------------------------------------------------------AATGCC------------------TGGGTAGGT---TTCATCATCGGAATGGCTGGCTGGCTGTACATCCTGTATGAGATT---------------TTT------GCG---GGGGAAGCAGGCAAAGCATCAGCAGAC------AAG---GCCCCAGAGTCGGTC---AAA---TCA---GCT---TTT---AGT---GCGATG---CGCTTGATTGTTACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GAASS-GI------------FWR-LLIGTVVMLLGGYCGE---V------G--Y-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAD--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927621 [IV-Proteo3-b] PRGD_OTU013_070aaac6a351d87c34dd447aab048531 gb|KJ927621| PRGD_OTU013_070aaac6a351d87c34dd447aab048531, putative proteorhodopsin gene, partial cds. PRGD_OTU013_070aaac6a351d87c34dd447aab048531, putative proteorhodopsin gene, partial cds. KJ927621 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTAATCACCGTGCCACTCCAAATGGTAGAATTTTACCTGATCCTAGCGGCTGTTGGCGCAGCTTCCTCCGGAATATTCTGGCGCCTTTTGATCGGCACAGTTGTGATGCTCCTTGGGGGCTACTGTGGTGAAGTCGGGTACTTGAACGCCTGGGTTGGTTTCATCATCGGAATGGCTGGCTGGCTGTATATCCTGTATGAGATTTTTGCGGGAGAAGCGGGCAAAGCATCAGCAGACAAGGCCCCAGAGTCGGTCAAATCAGCTTTCAGTGCCATGCGCTTGATTGTTACCGTA LITVPLQMVEFYLILAAVGAASSGIFWRLLIGTVVMLLGGYCGEVGYLNAWVGFIIGMAGWLYILYEIFAGEAGKASADKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACCGTGCCACTCCAAATGGTAGAATTTTACCTGATCCTAGCGGCT---------GTT---GGCGCAGCTTCCTCC---GGAATA------------------------------------TTCTGGCGC---CTTTTGATCGGCACAGTTGTGATGCTCCTTGGGGGCTACTGTGGTGAA---------GTC------------------GGG------TAC---------------------------------TTG------------------------------------------------------------------AACGCC------------------TGGGTTGGT---TTCATCATCGGAATGGCTGGCTGGCTGTATATCCTGTATGAGATT---------------TTT------GCG---GGAGAAGCGGGCAAAGCATCAGCAGAC------AAG---GCCCCAGAGTCGGTC---AAA---TCA---GCT---TTC---AGT---GCCATG---CGCTTGATTGTTACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GAASS-GI------------FWR-LLIGTVVMLLGGYCGE---V------G--Y-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAD--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927648 [IV-Proteo3-b] PRGD_OTU013_7967e64334790edd1c1a43294da39974 gb|KJ927648| PRGD_OTU013_7967e64334790edd1c1a43294da39974, putative proteorhodopsin gene, partial cds. PRGD_OTU013_7967e64334790edd1c1a43294da39974, putative proteorhodopsin gene, partial cds. KJ927648 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTAATCACCGTTCCACTGCAAATGGTAGAATTCTACCTTATCCTTGCGGCCGTTGGTGCAGCTTCCTCTGGAATATTCTGGCGCCTTTTGATCGGCTCAGTTGTGATGCTACTCGGTGGCTACTGCGGTGAAGTTGGATACCTCAATGCCTGGGTTGGATTCATTATCGGAATGGCCGGTTGGTTGTATATCCTGTACGAGATTTTCGCGGGAGAAGCGGGCAAAGCCTCCGCAGAGAAAGCACCGGAGTCAGTAAAATCAGCTTTCAGCGCGATGCGTTTGATTGTTACCGTA LITVPLQMVEFYLILAAVGAASSGIFWRLLIGSVVMLLGGYCGEVGYLNAWVGFIIGMAGWLYILYEIFAGEAGKASAEKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACCGTTCCACTGCAAATGGTAGAATTCTACCTTATCCTTGCGGCC---------GTT---GGTGCAGCTTCCTCT---GGAATA------------------------------------TTCTGGCGC---CTTTTGATCGGCTCAGTTGTGATGCTACTCGGTGGCTACTGCGGTGAA---------GTT------------------GGA------TAC---------------------------------CTC------------------------------------------------------------------AATGCC------------------TGGGTTGGA---TTCATTATCGGAATGGCCGGTTGGTTGTATATCCTGTACGAGATT---------------TTC------GCG---GGAGAAGCGGGCAAAGCCTCCGCAGAG------AAA---GCACCGGAGTCAGTA---AAA---TCA---GCT---TTC---AGC---GCGATG---CGTTTGATTGTTACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GAASS-GI------------FWR-LLIGSVVMLLGGYCGE---V------G--Y-----------L----------------------NA------WVG-FIIGMAGWLYILYEI-----F--A-GEAGKASAE--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ927656 [IV-Proteo3-b] PRGD_OTU013_b59e5bd55828d7314ae0774835c68c4d gb|KJ927656| PRGD_OTU013_b59e5bd55828d7314ae0774835c68c4d, putative proteorhodopsin gene, partial cds. PRGD_OTU013_b59e5bd55828d7314ae0774835c68c4d, putative proteorhodopsin gene, partial cds. KJ927656 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45; -33.28, 45.35) CTAATCACTGTGCCACTGCAAATGGTAGAATTCTACCTGATATTGGCAGCAGTGGGTGTTGCCTCGGCTGGTATATTCTGGCGCCTCTTAATCGGGTCGGTAGTAATGCTACTTGGCGGTTATGCTGGAGAAGTCGGCTACGTCAATGCCTGGTTAGGTTTCATCATCGGAATGGCTGGGTGGCTCTACATCCTTTACGAGATCTTTGCCGGAGAAGCAGGTAAAGCGTCTGCAGAGAAGGCACCAGAGTCGGTCAAATCTGCGTTTAGCGCCATGCGCTTAATCGTCACCGTT LITVPLQMVEFYLILAAVGVASAGIFWRLLIGSVVMLLGGYAGEVGYVNAWLGFIIGMAGWLYILYEIFAGEAGKASAEKAPESVKSAFSAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACTGTGCCACTGCAAATGGTAGAATTCTACCTGATATTGGCAGCA---------GTG---GGTGTTGCCTCGGCT---GGTATA------------------------------------TTCTGGCGC---CTCTTAATCGGGTCGGTAGTAATGCTACTTGGCGGTTATGCTGGAGAA---------GTC------------------GGC------TAC---------------------------------GTC------------------------------------------------------------------AATGCC------------------TGGTTAGGT---TTCATCATCGGAATGGCTGGGTGGCTCTACATCCTTTACGAGATC---------------TTT------GCC---GGAGAAGCAGGTAAAGCGTCTGCAGAG------AAG---GCACCAGAGTCGGTC---AAA---TCT---GCG---TTT---AGC---GCCATG---CGCTTAATCGTCACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLILAA---V-GVASA-GI------------FWR-LLIGSVVMLLGGYAGE---V------G--Y-----------V----------------------NA------WLG-FIIGMAGWLYILYEI-----F--A-GEAGKASAE--K-APESV-K-S-A-F-S-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [IV-Proteo3-b]_KJ929817 [IV-Proteo3-b] PRGD_OTU268_otuREP_748f485f6fea6bb939963071862f7953 gb|KJ929817| PRGD_OTU268_otuREP_748f485f6fea6bb939963071862f7953, putative proteorhodopsin gene, partial cds. PRGD_OTU268_otuREP_748f485f6fea6bb939963071862f7953, putative proteorhodopsin gene, partial cds. KJ929817 [[proteorhodopsin super-cluster IV/Proteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster IV Proteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTACTCACTGTGCCACTGCAAATGATTGAGTTCTATCTTATTTTGGCGGCTATTGGTGTGGCCAGCATTGGTATATTCTGGCGCTTATTAGTCGGAACACTCATCATGCTAGTGGCTGGATACATGGGTGAAGCCGGTATTCTAATCAGCCCAACGGTTGGTTTCGTCATTGGTATGGCTGGATGGTTCTACATCCTGTACGAAATATTCGCGGGTGAAGCGGGTAAAGCGGCTGCCAATGAGGCGTCTGCTGCCGTGCAGAGCTCATTCAATGCGATGCGCTTGATCGTTACAGTT LLTVPLQMIEFYLILAAIGVASIGIFWRLLVGTLIMLVAGYMGEAGILISPTVGFVIGMAGWFYILYEIFAGEAGKAAANEASAAVQSSFNAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTCACTGTGCCACTGCAAATGATTGAGTTCTATCTTATTTTGGCGGCT---------ATT---GGTGTGGCCAGCATT---GGTATA------------------------------------TTCTGGCGC---TTATTAGTCGGAACACTCATCATGCTAGTGGCTGGATACATGGGTGAA---------GCC------------------GGTATT---CTA---------------------------------ATC------------------------------------------------------------------AGCCCA------------------ACGGTTGGT---TTCGTCATTGGTATGGCTGGATGGTTCTACATCCTGTACGAAATA---------------TTC------GCG---GGTGAAGCGGGTAAAGCGGCTGCCAAT------GAG---GCGTCTGCTGCCGTG---CAG---AGC---TCA---TTC---AAT---GCGATG---CGCTTGATCGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMIEFYLILAA---I-GVASI-GI------------FWR-LLVGTLIMLVAGYMGE---A------GI-L-----------I----------------------SP------TVG-FVIGMAGWFYILYEI-----F--A-GEAGKAAAN--E-ASAAV-Q-S-S-F-N-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_KJ929579 [III-Beta3-a] PRGD_OTU158_554a8cc858e3d1530ea79daea25ed94a gb|KJ929579| PRGD_OTU158_554a8cc858e3d1530ea79daea25ed94a, putative proteorhodopsin gene, partial cds. PRGD_OTU158_554a8cc858e3d1530ea79daea25ed94a, putative proteorhodopsin gene, partial cds. KJ929579 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATCACGGTACCCCTCCTGATGGTTGAGTTCTACCTCATCCTCTCCGCTGTCACCAAGGTCTCGGGCGGCGTGTTTTGGCGCCTCATGATCGGTACCCTGGTCATGCTCATCGCCGGTTACCTCGGCGAAGCCGGCACCGTCGGCGCTTGGCCGGCCTTCATCGTCAGCATGGCTGGTTGGTTCTACATCATCTACGAGATCTACGCCGGTGAAGCCAGCAAGGTCAGCGCTGAGTCCGCTCCGCCTGCCGTCCAGTCTGCCTTCAAGCTGATGCGCGCCATCGTCGTCTTC LITVPLLMVEFYLILSAVTKVSGGVFWRLMIGTLVMLIAGYLGEAGTVGAWPAFIVSMAGWFYIIYEIYAGEASKVSAESAPPAVQSAFKLMRAIVVF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACGGTACCCCTCCTGATGGTTGAGTTCTACCTCATCCTCTCCGCT---------GTC---ACCAAGGTCTCGGGC---GGCGTG------------------------------------TTTTGGCGC---CTCATGATCGGTACCCTGGTCATGCTCATCGCCGGTTACCTCGGCGAA---------GCC------------------GGC------ACC---------------------------------GTC------------------------------------------------------------------GGCGCT------------------TGGCCGGCC---TTCATCGTCAGCATGGCTGGTTGGTTCTACATCATCTACGAGATC---------------TAC------GCC---GGTGAAGCCAGCAAGGTCAGCGCTGAG------TCC---GCTCCGCCTGCCGTC---CAG---TCT---GCC---TTC---AAG---CTGATG---CGCGCCATCGTCGTCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILSA---V-TKVSG-GV------------FWR-LMIGTLVMLIAGYLGE---A------G--T-----------V----------------------GA------WPA-FIVSMAGWFYIIYEI-----Y--A-GEASKVSAE--S-APPAV-Q-S-A-F-K-LM-RAIVVF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_KJ929581 [III-Beta3-a] PRGD_OTU158_eb757ded9e76484437c74fc3328dafb6 gb|KJ929581| PRGD_OTU158_eb757ded9e76484437c74fc3328dafb6, putative proteorhodopsin gene, partial cds. PRGD_OTU158_eb757ded9e76484437c74fc3328dafb6, putative proteorhodopsin gene, partial cds. KJ929581 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), Mediterranean Sea (38.6308, 7.9097) CTGATCACGGTACCCCTCCTGATGGTTGAGTTCTACCTCATCCTCTCCGCTGTCACCAAGGTCTCGGGCGGCGTGTTCTGGCGCCTCATGATCGGTACCCTGGTCATGCTCATCGCCGGTTACCTCGGCGAAGCCGGCACCGTCGGCGCTTGGCCGGCCTTCATCGTCAGCATGGCTGGTTGGTTCTACATCATCTACGAGATCTACGCCGGTGAAGCCAGCAAGGTCAGCGCTGAGTCCGCTCCGCCTGCTGTGCAGTCCGCCTTCAAGCTGATGCGCGCCATCGTCGTCTTC LITVPLLMVEFYLILSAVTKVSGGVFWRLMIGTLVMLIAGYLGEAGTVGAWPAFIVSMAGWFYIIYEIYAGEASKVSAESAPPAVQSAFKLMRAIVVF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACGGTACCCCTCCTGATGGTTGAGTTCTACCTCATCCTCTCCGCT---------GTC---ACCAAGGTCTCGGGC---GGCGTG------------------------------------TTCTGGCGC---CTCATGATCGGTACCCTGGTCATGCTCATCGCCGGTTACCTCGGCGAA---------GCC------------------GGC------ACC---------------------------------GTC------------------------------------------------------------------GGCGCT------------------TGGCCGGCC---TTCATCGTCAGCATGGCTGGTTGGTTCTACATCATCTACGAGATC---------------TAC------GCC---GGTGAAGCCAGCAAGGTCAGCGCTGAG------TCC---GCTCCGCCTGCTGTG---CAG---TCC---GCC---TTC---AAG---CTGATG---CGCGCCATCGTCGTCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILSA---V-TKVSG-GV------------FWR-LMIGTLVMLIAGYLGE---A------G--T-----------V----------------------GA------WPA-FIVSMAGWFYIIYEI-----Y--A-GEASKVSAE--S-APPAV-Q-S-A-F-K-LM-RAIVVF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_KJ929578 [III-Beta3-a] PRGD_OTU158_otuREP_eced2cdf890d255e604be0263a42eaae gb|KJ929578| PRGD_OTU158_otuREP_eced2cdf890d255e604be0263a42eaae, putative proteorhodopsin gene, partial cds. PRGD_OTU158_otuREP_eced2cdf890d255e604be0263a42eaae, putative proteorhodopsin gene, partial cds. KJ929578 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATCACGGTACCCCTCCTGATGGTTGAGTTCTACCTCATCCTCTCCGCGGTCACCAAGGTCTCGGGCGGCGTGTTTTGGCGCCTCATGATCGGTACCCTGGTCATGCTCATCGCCGGTTACCTCGGCGAAGCCGGCACCGTCGGCGCTTGGCCGGCCTTCATCGTCAGCATGGCTGGTTGGTTCTACATCATCTACGAGATCTACGCTGGTGAAGCCAGCAAGGTCAGCGCTGAGTCCGCTCCGCCTGCTGTGCAGTCCGCCTTCAAGCTGATGCGCGGCATCGTCGTCTTC LITVPLLMVEFYLILSAVTKVSGGVFWRLMIGTLVMLIAGYLGEAGTVGAWPAFIVSMAGWFYIIYEIYAGEASKVSAESAPPAVQSAFKLMRGIVVF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACGGTACCCCTCCTGATGGTTGAGTTCTACCTCATCCTCTCCGCG---------GTC---ACCAAGGTCTCGGGC---GGCGTG------------------------------------TTTTGGCGC---CTCATGATCGGTACCCTGGTCATGCTCATCGCCGGTTACCTCGGCGAA---------GCC------------------GGC------ACC---------------------------------GTC------------------------------------------------------------------GGCGCT------------------TGGCCGGCC---TTCATCGTCAGCATGGCTGGTTGGTTCTACATCATCTACGAGATC---------------TAC------GCT---GGTGAAGCCAGCAAGGTCAGCGCTGAG------TCC---GCTCCGCCTGCTGTG---CAG---TCC---GCC---TTC---AAG---CTGATG---CGCGGCATCGTCGTCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILSA---V-TKVSG-GV------------FWR-LMIGTLVMLIAGYLGE---A------G--T-----------V----------------------GA------WPA-FIVSMAGWFYIIYEI-----Y--A-GEASKVSAE--S-APPAV-Q-S-A-F-K-LM-RGIVVF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_KJ929580 [III-Beta3-a] PRGD_OTU158_d6404eecb4f4dfd6a0d50ace8bc0ba75 gb|KJ929580| PRGD_OTU158_d6404eecb4f4dfd6a0d50ace8bc0ba75, putative proteorhodopsin gene, partial cds. PRGD_OTU158_d6404eecb4f4dfd6a0d50ace8bc0ba75, putative proteorhodopsin gene, partial cds. KJ929580 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683) CTCATCACCGTGCCCCTCCTGATGGTTGAGTTCTTCCTCATCCTCTCCGCGGTCACCAAGGTCTCGGGCGGCGTTTTCTGGCGCCTCATGATCGGTACCCTGGTCATGCTCATCGCCGGTTACCTCGGCGAAGCCGGCACCGTCGGCGCCTGGCCGGCCTTCATCGTCAGCATGGCTGGTTGGTTCTACATCATCTACGAGATCTACGCCGGTGAAGCCAGCAAGGTCAGCGCTGAGTCCGCTCCGCCTGCCGTCCAGTCTGCCTTCAATCTCATGCGCGGCATCGTGGTCTTC LITVPLLMVEFFLILSAVTKVSGGVFWRLMIGTLVMLIAGYLGEAGTVGAWPAFIVSMAGWFYIIYEIYAGEASKVSAESAPPAVQSAFNLMRGIVVF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACCGTGCCCCTCCTGATGGTTGAGTTCTTCCTCATCCTCTCCGCG---------GTC---ACCAAGGTCTCGGGC---GGCGTT------------------------------------TTCTGGCGC---CTCATGATCGGTACCCTGGTCATGCTCATCGCCGGTTACCTCGGCGAA---------GCC------------------GGC------ACC---------------------------------GTC------------------------------------------------------------------GGCGCC------------------TGGCCGGCC---TTCATCGTCAGCATGGCTGGTTGGTTCTACATCATCTACGAGATC---------------TAC------GCC---GGTGAAGCCAGCAAGGTCAGCGCTGAG------TCC---GCTCCGCCTGCCGTC---CAG---TCT---GCC---TTC---AAT---CTCATG---CGCGGCATCGTGGTCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFFLILSA---V-TKVSG-GV------------FWR-LMIGTLVMLIAGYLGE---A------G--T-----------V----------------------GA------WPA-FIVSMAGWFYIIYEI-----Y--A-GEASKVSAE--S-APPAV-Q-S-A-F-N-LM-RGIVVF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_KJ929813 [III-Beta3-a] PRGD_OTU264_otuREP_4cd54bf4cf1b49ea9794dd585e7f1084 gb|KJ929813| PRGD_OTU264_otuREP_4cd54bf4cf1b49ea9794dd585e7f1084, putative proteorhodopsin gene, partial cds. PRGD_OTU264_otuREP_4cd54bf4cf1b49ea9794dd585e7f1084, putative proteorhodopsin gene, partial cds. KJ929813 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175) TTGATCACGGTTCCTTTGCTGATGGTCGAATTTTACTTAATTCTCTCAGCGATCACCAAGGTTCCTGGTGGCGTGTTTTGGCGCTTGATGATCGGAACGATCGTGATGCTTGTCGGTGGATATCTCGGCGAGGCCGGGTATATGGACACTTGGGTTGCATTCATCATCGGAATGGCCGGCTGGGCATTTATCCTTTGGGAAATCTTTTTCGGCGAGGCTGGAAAAATCAATGCTAACTCAGCACCCCCAGCAGTGCAGTCTGCTTTCAACGTCATGCGTTGGATTGTGGTGATT LITVPLLMVEFYLILSAITKVPGGVFWRLMIGTIVMLVGGYLGEAGYMDTWVAFIIGMAGWAFILWEIFFGEAGKINANSAPPAVQSAFNVMRWIVVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACGGTTCCTTTGCTGATGGTCGAATTTTACTTAATTCTCTCAGCG---------ATC---ACCAAGGTTCCTGGT---GGCGTG------------------------------------TTTTGGCGC---TTGATGATCGGAACGATCGTGATGCTTGTCGGTGGATATCTCGGCGAG---------GCC------------------GGG------TAT---------------------------------ATG------------------------------------------------------------------GACACT------------------TGGGTTGCA---TTCATCATCGGAATGGCCGGCTGGGCATTTATCCTTTGGGAAATC---------------TTT------TTC---GGCGAGGCTGGAAAAATCAATGCTAAC------TCA---GCACCCCCAGCAGTG---CAG---TCT---GCT---TTC---AAC---GTCATG---CGTTGGATTGTGGTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILSA---I-TKVPG-GV------------FWR-LMIGTIVMLVGGYLGE---A------G--Y-----------M----------------------DT------WVA-FIIGMAGWAFILWEI-----F--F-GEAGKINAN--S-APPAV-Q-S-A-F-N-VM-RWIVVI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_KJ929924 [III-Beta3-a] PRGD_OTU375_otuREP_c932887dead6c54177d7a39d101a7308 gb|KJ929924| PRGD_OTU375_otuREP_c932887dead6c54177d7a39d101a7308, putative proteorhodopsin gene, partial cds. PRGD_OTU375_otuREP_c932887dead6c54177d7a39d101a7308, putative proteorhodopsin gene, partial cds. KJ929924 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) CTCATCACCGTGCCGCTGTTGATGATCGAGTTTTTCCTGATCCTAGCAGCGATCACCAAAGTGCCCACCGGTGTCTTCTGGCGCCTGCTGCTCGGCTCGATCGTCATGCTGGTTGGCGGTTACCTCGGTGAGGCTGGCTACGTGAACGTCTGGCTTGGTTTCCTGGTCGGCATGGGCGGCTGGGCGGTCATCATCTACGAGATCTATGGCGGTCAAGCTAGCAAGATCAACGCAGACTCGGCGCCGGCATCGGTGCAAAGTGCTTTCCGCCTGATGCGCAATATCGTGCTGATT LITVPLLMIEFFLILAAITKVPTGVFWRLLLGSIVMLVGGYLGEAGYVNVWLGFLVGMGGWAVIIYEIYGGQASKINADSAPASVQSAFRLMRNIVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACCGTGCCGCTGTTGATGATCGAGTTTTTCCTGATCCTAGCAGCG---------ATC---ACCAAAGTGCCCACC---GGTGTC------------------------------------TTCTGGCGC---CTGCTGCTCGGCTCGATCGTCATGCTGGTTGGCGGTTACCTCGGTGAG---------GCT------------------GGC------TAC---------------------------------GTG------------------------------------------------------------------AACGTC------------------TGGCTTGGT---TTCCTGGTCGGCATGGGCGGCTGGGCGGTCATCATCTACGAGATC---------------TAT------GGC---GGTCAAGCTAGCAAGATCAACGCAGAC------TCG---GCGCCGGCATCGGTG---CAA---AGT---GCT---TTC---CGC---CTGATG---CGCAATATCGTGCTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFLILAA---I-TKVPT-GV------------FWR-LLLGSIVMLVGGYLGE---A------G--Y-----------V----------------------NV------WLG-FLVGMGGWAVIIYEI-----Y--G-GQASKINAD--S-APASV-Q-S-A-F-R-LM-RNIVLI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_KJ929593 [III-Beta3-a] PRGD_OTU163_otuREP_8f9264961b0ea021e0d31e6b9223b22b gb|KJ929593| PRGD_OTU163_otuREP_8f9264961b0ea021e0d31e6b9223b22b, putative proteorhodopsin gene, partial cds. PRGD_OTU163_otuREP_8f9264961b0ea021e0d31e6b9223b22b, putative proteorhodopsin gene, partial cds. KJ929593 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683) CTCATCACCGTGCCGCTGCTGATGGTTGAGTTCTATCTCATCCTCGCGGCGATCACGAAGGTTCCCGGCGGCGTCTTCTGGCGCCTGATGATCGGCACCCTGGTGATGCTCATCGGCGGCTATCTCGGCGAAGCTGGTGTCATCGGCGCCTGGCCCGGCTTCATCGTCGGGATGCTCGGCTGGGTGTACATCCTCAGGGAAATCTTCGCTGGCGAGGCCAGCAAGATCAGCGCAGAGAGCGCCCCGGAGTCGGTCCAGTCCGCCTTCAAGCTCATGCGGACGATCGTCACCATT LITVPLLMVEFYLILAAITKVPGGVFWRLMIGTLVMLIGGYLGEAGVIGAWPGFIVGMLGWVYILREIFAGEASKISAESAPESVQSAFKLMRTIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACCGTGCCGCTGCTGATGGTTGAGTTCTATCTCATCCTCGCGGCG---------ATC---ACGAAGGTTCCCGGC---GGCGTC------------------------------------TTCTGGCGC---CTGATGATCGGCACCCTGGTGATGCTCATCGGCGGCTATCTCGGCGAA---------GCT------------------GGT------GTC---------------------------------ATC------------------------------------------------------------------GGCGCC------------------TGGCCCGGC---TTCATCGTCGGGATGCTCGGCTGGGTGTACATCCTCAGGGAAATC---------------TTC------GCT---GGCGAGGCCAGCAAGATCAGCGCAGAG------AGC---GCCCCGGAGTCGGTC---CAG---TCC---GCC---TTC---AAG---CTCATG---CGGACGATCGTCACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILAA---I-TKVPG-GV------------FWR-LMIGTLVMLIGGYLGE---A------G--V-----------I----------------------GA------WPG-FIVGMLGWVYILREI-----F--A-GEASKISAE--S-APESV-Q-S-A-F-K-LM-RTIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_KJ929595 [III-Beta3-a] PRGD_OTU163_ffa3b79813fa3732f79f32918d238f21 gb|KJ929595| PRGD_OTU163_ffa3b79813fa3732f79f32918d238f21, putative proteorhodopsin gene, partial cds. PRGD_OTU163_ffa3b79813fa3732f79f32918d238f21, putative proteorhodopsin gene, partial cds. KJ929595 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCATCACCGTGCCGCTGCTCATGGTTGAGTTCTATCTCATCCTCGCGGCGATCACGAAGGTCCCGGGCGGCGTCTTTTGGCGCCTGATGATCGGCACCCTGGTGATGCTCATCGGCGGCTACCTCGGCGAGGCCGTCAACGCCGAAGGCAACTCCGTGATCGGGGTCTGGCCCGGCTTCATCGTCGGCATGCTCGGCTGGGTTTACATCCTGAGGGAAATCTTCGTCGGCGAGGCCAGCAAGATCAGCGCCGAGAGCGCCCCCGCCTCGGTGCAGTCCGCTTTCAAGCTGATGCGTAACATCGTCACCATC LITVPLLMVEFYLILAAITKVPGGVFWRLMIGTLVMLIGGYLGEAVNAEGNSVIGVWPGFIVGMLGWVYILREIFVGEASKISAESAPASVQSAFKLMRNIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACCGTGCCGCTGCTCATGGTTGAGTTCTATCTCATCCTCGCGGCG---------ATC---ACGAAGGTCCCGGGC---GGCGTC------------------------------------TTTTGGCGC---CTGATGATCGGCACCCTGGTGATGCTCATCGGCGGCTACCTCGGCGAG---------GCCGTCAACGCCGAAGGCAACTCC------GTG---------------------------------ATC------------------------------------------------------------------GGGGTC------------------TGGCCCGGC---TTCATCGTCGGCATGCTCGGCTGGGTTTACATCCTGAGGGAAATC---------------TTC------GTC---GGCGAGGCCAGCAAGATCAGCGCCGAG------AGC---GCCCCCGCCTCGGTG---CAG---TCC---GCT---TTC---AAG---CTGATG---CGTAACATCGTCACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILAA---I-TKVPG-GV------------FWR-LMIGTLVMLIGGYLGE---AVNAEGNS--V-----------I----------------------GV------WPG-FIVGMLGWVYILREI-----F--V-GEASKISAE--S-APASV-Q-S-A-F-K-LM-RNIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_KJ929594 [III-Beta3-a] PRGD_OTU163_a1fa078fd1c0d0268d4899d09a957d16 gb|KJ929594| PRGD_OTU163_a1fa078fd1c0d0268d4899d09a957d16, putative proteorhodopsin gene, partial cds. PRGD_OTU163_a1fa078fd1c0d0268d4899d09a957d16, putative proteorhodopsin gene, partial cds. KJ929594 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCATCACTGTGCCGCTGCTGATGGTTGAGTTCTATCTCATCCTGGCCGCCATCACGAAGGTCCCGGGGGGCGTCTTCTGGCGCCTCATGATCGGCACGCTCGTGATGCTGATCGGTGGCTACCTCGGCGAGGCCGGGGTGATCGCCGCCTGGCCGGGATTCATTGTCGGCATGCTCGGTTGGGCGTACATCCTCAAGGAGATCTTCGCCGGCGAGGCGAGCAAGATCAGCGCCGAGAGCGCCCCGGCTTCGGTGCAATCAGCGTTCAAGCTGATGCGCAACATCGTCACCATC LITVPLLMVEFYLILAAITKVPGGVFWRLMIGTLVMLIGGYLGEAGVIAAWPGFIVGMLGWAYILKEIFAGEASKISAESAPASVQSAFKLMRNIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACTGTGCCGCTGCTGATGGTTGAGTTCTATCTCATCCTGGCCGCC---------ATC---ACGAAGGTCCCGGGG---GGCGTC------------------------------------TTCTGGCGC---CTCATGATCGGCACGCTCGTGATGCTGATCGGTGGCTACCTCGGCGAG---------GCC------------------GGG------GTG---------------------------------ATC------------------------------------------------------------------GCCGCC------------------TGGCCGGGA---TTCATTGTCGGCATGCTCGGTTGGGCGTACATCCTCAAGGAGATC---------------TTC------GCC---GGCGAGGCGAGCAAGATCAGCGCCGAG------AGC---GCCCCGGCTTCGGTG---CAA---TCA---GCG---TTC---AAG---CTGATG---CGCAACATCGTCACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILAA---I-TKVPG-GV------------FWR-LMIGTLVMLIGGYLGE---A------G--V-----------I----------------------AA------WPG-FIVGMLGWAYILKEI-----F--A-GEASKISAE--S-APASV-Q-S-A-F-K-LM-RNIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-a]_KJ929927 [III-Beta3-a] PRGD_OTU378_otuREP_cbfe194454740a1db499d154a2f18bc8 gb|KJ929927| PRGD_OTU378_otuREP_cbfe194454740a1db499d154a2f18bc8, putative proteorhodopsin gene, partial cds. PRGD_OTU378_otuREP_cbfe194454740a1db499d154a2f18bc8, putative proteorhodopsin gene, partial cds. KJ929927 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATGATTACAGTGCCACTGTTGATGATCGAGTTCTATTTGATCTTGTCGGCAATCACCAAGGTTCCCGTTGGCGTCTTCTGGCGCTTGATGGTCGGAACTCTGATCATGCTGTTGGGTGGCTACCTGGGTGAAGCGGGATACATGCCCGTTTGGCCTGCGTTCATCATCGGTATGGCAGGTTGGGCTTATATCCTTTACGAGATTTATTTGGGTCAAGCCGGAAAGATCAACGCAGCCAGTGCACCGCCTGCAGTGCAGTCAGCTTTCGCGGCAATGCGCTTTATTGTGGTATTC MITVPLLMIEFYLILSAITKVPVGVFWRLMVGTLIMLLGGYLGEAGYMPVWPAFIIGMAGWAYILYEIYLGQAGKINAASAPPAVQSAFAAMRFIVVF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGATTACAGTGCCACTGTTGATGATCGAGTTCTATTTGATCTTGTCGGCA---------ATC---ACCAAGGTTCCCGTT---GGCGTC------------------------------------TTCTGGCGC---TTGATGGTCGGAACTCTGATCATGCTGTTGGGTGGCTACCTGGGTGAA---------GCG------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------CCCGTT------------------TGGCCTGCG---TTCATCATCGGTATGGCAGGTTGGGCTTATATCCTTTACGAGATT---------------TAT------TTG---GGTCAAGCCGGAAAGATCAACGCAGCC------AGT---GCACCGCCTGCAGTG---CAG---TCA---GCT---TTC---GCG---GCAATG---CGCTTTATTGTGGTATTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MITVPLLMIEFYLILSA---I-TKVPV-GV------------FWR-LMVGTLIMLLGGYLGE---A------G--Y-----------M----------------------PV------WPA-FIIGMAGWAYILYEI-----Y--L-GQAGKINAA--S-APPAV-Q-S-A-F-A-AM-RFIVVF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-AAA024O16]_KJ929570 [III-Beta3-AAA024O16] PRGD_OTU156_otuREP_675bd993575d8a989f9c6f09db4a2c9f gb|KJ929570| PRGD_OTU156_otuREP_675bd993575d8a989f9c6f09db4a2c9f, putative proteorhodopsin gene, partial cds. PRGD_OTU156_otuREP_675bd993575d8a989f9c6f09db4a2c9f, putative proteorhodopsin gene, partial cds. KJ929570 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/SCGC_AAA024O16-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 SCGC_AAA024O16-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175) TTAATTACAGTCCCGTTACTAATGGTTGAGTTCTACCTTATTTTGGCTGCTATTGCTAAAGTACCAAGTGGTGTATTTTGGCGACTAATGGTTGGTTCGTTAGTTATGTTGACAGGTGGCTATTTAGGCGAAGCTGGTTACCTAGCTGTATTACCTGCATTCATTATTGGGATGGTAGGTTGGGCATATATTTTATGGGAAATTTTTGGTGGTGAAGCGAGCAAAATTAATGCAACCCAAGCACCGGCTAATGTGCAATCAGCATTCAATTTAATGCGCTGGATTGTCACCATT LITVPLLMVEFYLILAAIAKVPSGVFWRLMVGSLVMLTGGYLGEAGYLAVLPAFIIGMVGWAYILWEIFGGEASKINATQAPANVQSAFNLMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTCCCGTTACTAATGGTTGAGTTCTACCTTATTTTGGCTGCT---------ATT---GCTAAAGTACCAAGT---GGTGTA------------------------------------TTTTGGCGA---CTAATGGTTGGTTCGTTAGTTATGTTGACAGGTGGCTATTTAGGCGAA---------GCT------------------GGT------TAC---------------------------------CTA------------------------------------------------------------------GCTGTA------------------TTACCTGCA---TTCATTATTGGGATGGTAGGTTGGGCATATATTTTATGGGAAATT---------------TTT------GGT---GGTGAAGCGAGCAAAATTAATGCAACC------CAA---GCACCGGCTAATGTG---CAA---TCA---GCA---TTC---AAT---TTAATG---CGCTGGATTGTCACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILAA---I-AKVPS-GV------------FWR-LMVGSLVMLTGGYLGE---A------G--Y-----------L----------------------AV------LPA-FIIGMVGWAYILWEI-----F--G-GEASKINAT--Q-APANV-Q-S-A-F-N-LM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-AAA024O16]_KJ929573 [III-Beta3-AAA024O16] PRGD_OTU156_f124c7f2909e5fae5386e72512dafab6 gb|KJ929573| PRGD_OTU156_f124c7f2909e5fae5386e72512dafab6, putative proteorhodopsin gene, partial cds. PRGD_OTU156_f124c7f2909e5fae5386e72512dafab6, putative proteorhodopsin gene, partial cds. KJ929573 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/SCGC_AAA024O16-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 SCGC_AAA024O16-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185) TTAATTACTGTGCCATTGCTGATGATTGAGTTTTACCTAATCTTAGCAGCAATTGCCAAAGTACCAACAGGCGTGTTTTGGCGCTTAATGGTTGGTACTTTAGTGATGCTTGTAGGTGGCTTCTTGGGTGAAGCTGGTTATATAGGCCTTATACCTGGGTTCGTAATTGGAATGGTGGGTTGGGCATATATTTTGTGGGAAATTTTTGGCGGCGAAGCTAGTAAAATCAATGCGAATCAAGCACCTGCAAACGTTCAATCAGCTTTTAATCTCATGCGCTGGATTGTGACTATT LITVPLLMIEFYLILAAIAKVPTGVFWRLMVGTLVMLVGGFLGEAGYIGLIPGFVIGMVGWAYILWEIFGGEASKINANQAPANVQSAFNLMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCATTGCTGATGATTGAGTTTTACCTAATCTTAGCAGCA---------ATT---GCCAAAGTACCAACA---GGCGTG------------------------------------TTTTGGCGC---TTAATGGTTGGTACTTTAGTGATGCTTGTAGGTGGCTTCTTGGGTGAA---------GCT------------------GGT------TAT---------------------------------ATA------------------------------------------------------------------GGCCTT------------------ATACCTGGG---TTCGTAATTGGAATGGTGGGTTGGGCATATATTTTGTGGGAAATT---------------TTT------GGC---GGCGAAGCTAGTAAAATCAATGCGAAT------CAA---GCACCTGCAAACGTT---CAA---TCA---GCT---TTT---AAT---CTCATG---CGCTGGATTGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILAA---I-AKVPT-GV------------FWR-LMVGTLVMLVGGFLGE---A------G--Y-----------I----------------------GL------IPG-FVIGMVGWAYILWEI-----F--G-GEASKINAN--Q-APANV-Q-S-A-F-N-LM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-AAA024O16]_KJ929910 [III-Beta3-AAA024O16] PRGD_OTU361_otuREP_dd18a0c1a49e4c2160a9ca8486a09ec9 gb|KJ929910| PRGD_OTU361_otuREP_dd18a0c1a49e4c2160a9ca8486a09ec9, putative proteorhodopsin gene, partial cds. PRGD_OTU361_otuREP_dd18a0c1a49e4c2160a9ca8486a09ec9, putative proteorhodopsin gene, partial cds. KJ929910 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/SCGC_AAA024O16-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 SCGC_AAA024O16-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097), Arctic Ocean-Pacific side (72.0542, -130.8781; 69.5142, -133.4185) CTGATTACCGTTCCCTTGTTAATGATCGAATTTTATTTGATCTTATCTGCAATCACCAAAGTGCCAGCAGGTATCTTCTGGCGCCTGTTGATTGGTACCATGGTGATGTTAGTTGGTGGTTATTTGGGTGAAGCAGGCTATATGTCTGTCTGGCCAGCATTCATTATCGGTATGGTCGGTTGGGCTTACATTCTGTGGGAAATCTTTGGCGGTGAAGCTGGCAAGTTGAATGCCTCTTCGGCACCTCCTTCGGTTCAGTCAGCCTTCAATACGATGCGCTGGATTGTTACCATT LITVPLLMIEFYLILSAITKVPAGIFWRLLIGTMVMLVGGYLGEAGYMSVWPAFIIGMVGWAYILWEIFGGEAGKLNASSAPPSVQSAFNTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACCGTTCCCTTGTTAATGATCGAATTTTATTTGATCTTATCTGCA---------ATC---ACCAAAGTGCCAGCA---GGTATC------------------------------------TTCTGGCGC---CTGTTGATTGGTACCATGGTGATGTTAGTTGGTGGTTATTTGGGTGAA---------GCA------------------GGC------TAT---------------------------------ATG------------------------------------------------------------------TCTGTC------------------TGGCCAGCA---TTCATTATCGGTATGGTCGGTTGGGCTTACATTCTGTGGGAAATC---------------TTT------GGC---GGTGAAGCTGGCAAGTTGAATGCCTCT------TCG---GCACCTCCTTCGGTT---CAG---TCA---GCC---TTC---AAT---ACGATG---CGCTGGATTGTTACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILSA---I-TKVPA-GI------------FWR-LLIGTMVMLVGGYLGE---A------G--Y-----------M----------------------SV------WPA-FIIGMVGWAYILWEI-----F--G-GEAGKLNAS--S-APPSV-Q-S-A-F-N-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-AAA024O16]_KJ929571 [III-Beta3-AAA024O16] PRGD_OTU156_042bd2d92fe33fd9432a51e36a56bee7 gb|KJ929571| PRGD_OTU156_042bd2d92fe33fd9432a51e36a56bee7, putative proteorhodopsin gene, partial cds. PRGD_OTU156_042bd2d92fe33fd9432a51e36a56bee7, putative proteorhodopsin gene, partial cds. KJ929571 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/SCGC_AAA024O16-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 SCGC_AAA024O16-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTGCCACTATTGATGATTGAGTTCTACTTGATTCTTTCAGCAATTGCAAAAGTTCCAACAGGCGTGTTTTGGCGCTTGATGATTGGTACATTGGTAATGTTGATCGGTGGATACTTAGGCGAAGCTGGATACATGGCTGTATGGCCTGCATTCATCATCGGTATGATCGGTTGGATTTACATCCTTTGGGAAATCTTCGCAGGCGAAGCCAGCAAGATCAATGCACAACAAGCTCCAGCAAATGTACAGTCAGCATTTAATTTAATGCGTTGGATTGTTACTATC LITVPLLMIEFYLILSAIAKVPTGVFWRLMIGTLVMLIGGYLGEAGYMAVWPAFIIGMIGWIYILWEIFAGEASKINAQQAPANVQSAFNLMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCACTATTGATGATTGAGTTCTACTTGATTCTTTCAGCA---------ATT---GCAAAAGTTCCAACA---GGCGTG------------------------------------TTTTGGCGC---TTGATGATTGGTACATTGGTAATGTTGATCGGTGGATACTTAGGCGAA---------GCT------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------GCTGTA------------------TGGCCTGCA---TTCATCATCGGTATGATCGGTTGGATTTACATCCTTTGGGAAATC---------------TTC------GCA---GGCGAAGCCAGCAAGATCAATGCACAA------CAA---GCTCCAGCAAATGTA---CAG---TCA---GCA---TTT---AAT---TTAATG---CGTTGGATTGTTACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILSA---I-AKVPT-GV------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------M----------------------AV------WPA-FIIGMIGWIYILWEI-----F--A-GEASKINAQ--Q-APANV-Q-S-A-F-N-LM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3-AAA024O16]_KJ929572 [III-Beta3-AAA024O16] PRGD_OTU156_8e9b204def50d815a570151f7bcff4bd gb|KJ929572| PRGD_OTU156_8e9b204def50d815a570151f7bcff4bd, putative proteorhodopsin gene, partial cds. PRGD_OTU156_8e9b204def50d815a570151f7bcff4bd, putative proteorhodopsin gene, partial cds. KJ929572 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3/SCGC_AAA024O16-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 SCGC_AAA024O16-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTACCACTATTGATGATTGAGTTCTACTTGATCCTTCAAGCAATTGCAAAAGTACCAGTAGGCGTATTTTGGCGTTTGATGATCGGTACATTGGTCATGTTGGTTGGTGGATACTTAGGCGAAGCTGGATACATGGCTGTATGGCCTGCATTCATCATCGGTATGGTTGGTTGGGCATACATTCTTTACGAAATCTTCGCTGGCGAAGCTAGCAAGATCAATGCACAACAAGCACCAGCGAATGTACAGTCAGCATTTAACTTAATGCGTTGGATTGTGACAATC LITVPLLMIEFYLILQAIAKVPVGVFWRLMIGTLVMLVGGYLGEAGYMAVWPAFIIGMVGWAYILYEIFAGEASKINAQQAPANVQSAFNLMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTACCACTATTGATGATTGAGTTCTACTTGATCCTTCAAGCA---------ATT---GCAAAAGTACCAGTA---GGCGTA------------------------------------TTTTGGCGT---TTGATGATCGGTACATTGGTCATGTTGGTTGGTGGATACTTAGGCGAA---------GCT------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------GCTGTA------------------TGGCCTGCA---TTCATCATCGGTATGGTTGGTTGGGCATACATTCTTTACGAAATC---------------TTC------GCT---GGCGAAGCTAGCAAGATCAATGCACAA------CAA---GCACCAGCGAATGTA---CAG---TCA---GCA---TTT---AAC---TTAATG---CGTTGGATTGTGACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILQA---I-AKVPV-GV------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------M----------------------AV------WPA-FIIGMVGWAYILYEI-----F--A-GEASKINAQ--Q-APANV-Q-S-A-F-N-LM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3]_KJ929651 [III-Beta3] PRGD_OTU182_393eb76988b673edcb28d82285806c43 gb|KJ929651| PRGD_OTU182_393eb76988b673edcb28d82285806c43, putative proteorhodopsin gene, partial cds. PRGD_OTU182_393eb76988b673edcb28d82285806c43, putative proteorhodopsin gene, partial cds. KJ929651 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACCGTGCCACTGCTCATGATCGAGTTCTTCTTGATCTTGTCGGCGGTCACCAAAGTCCCTGCAGGCGTTTTCTGGCGTCTCATGATTGGCACCTTGGTCATGCTGGTGGGCGGCTACGTGGGCGAAGCAGGTTACATGGCGGCGTTGCCAGCATTCGTCATTGGCATGGTTGGCTGGGCTTACATCCTCTATGAAATCTTCATGGGGCAAGCAAGCAAGATCAACGCCGAAAAAGCACCCCAGTCTGTTCAATCTGCTTTCAAAACCATGCGTTTGATCGTGACCTTC LITVPLLMIEFFLILSAVTKVPAGVFWRLMIGTLVMLVGGYVGEAGYMAALPAFVIGMVGWAYILYEIFMGQASKINAEKAPQSVQSAFKTMRLIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTGCCACTGCTCATGATCGAGTTCTTCTTGATCTTGTCGGCG---------GTC---ACCAAAGTCCCTGCA---GGCGTT------------------------------------TTCTGGCGT---CTCATGATTGGCACCTTGGTCATGCTGGTGGGCGGCTACGTGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GCGGCG------------------TTGCCAGCA---TTCGTCATTGGCATGGTTGGCTGGGCTTACATCCTCTATGAAATC---------------TTC------ATG---GGGCAAGCAAGCAAGATCAACGCCGAA------AAA---GCACCCCAGTCTGTT---CAA---TCT---GCT---TTC---AAA---ACCATG---CGTTTGATCGTGACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFLILSA---V-TKVPA-GV------------FWR-LMIGTLVMLVGGYVGE---A------G--Y-----------M----------------------AA------LPA-FVIGMVGWAYILYEI-----F--M-GQASKINAE--K-APQSV-Q-S-A-F-K-TM-RLIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3]_KJ929650 [III-Beta3] PRGD_OTU182_otuREP_5d11fe5e6f5cc6592a2d53f000e0deda gb|KJ929650| PRGD_OTU182_otuREP_5d11fe5e6f5cc6592a2d53f000e0deda, putative proteorhodopsin gene, partial cds. PRGD_OTU182_otuREP_5d11fe5e6f5cc6592a2d53f000e0deda, putative proteorhodopsin gene, partial cds. KJ929650 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185) TTGATCACCGTGCCACTGCTCATGATCGAGTTCTTCTTGATCTTGTCGGCGGTCACCAAAGTCCCTGCAGGCGTTTTCTGGCGTCTCATGATTGGCACCTTGGTCATGCTGGTGGGCGGCTACGTGGGCGAAGCAGGTTACATGGCGGCGTTGCCAGCATTCGTCATCGGTATGGTTGGCTGGGCTTACATCCTCTATGAAATCTTCATGGGGCAAGCAAGCAAGATCAACGCCGAAAAAGCACCCCAGTCTGTTCAATCTGCTTTCAAAACCATGCGTTTGATCGTGACCTTC LITVPLLMIEFFLILSAVTKVPAGVFWRLMIGTLVMLVGGYVGEAGYMAALPAFVIGMVGWAYILYEIFMGQASKINAEKAPQSVQSAFKTMRLIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTGCCACTGCTCATGATCGAGTTCTTCTTGATCTTGTCGGCG---------GTC---ACCAAAGTCCCTGCA---GGCGTT------------------------------------TTCTGGCGT---CTCATGATTGGCACCTTGGTCATGCTGGTGGGCGGCTACGTGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GCGGCG------------------TTGCCAGCA---TTCGTCATCGGTATGGTTGGCTGGGCTTACATCCTCTATGAAATC---------------TTC------ATG---GGGCAAGCAAGCAAGATCAACGCCGAA------AAA---GCACCCCAGTCTGTT---CAA---TCT---GCT---TTC---AAA---ACCATG---CGTTTGATCGTGACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFLILSA---V-TKVPA-GV------------FWR-LMIGTLVMLVGGYVGE---A------G--Y-----------M----------------------AA------LPA-FVIGMVGWAYILYEI-----F--M-GQASKINAE--K-APQSV-Q-S-A-F-K-TM-RLIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Beta3]_KJ929652 [III-Beta3] PRGD_OTU182_5de33cdde456fd8ec02278e76071ed9c gb|KJ929652| PRGD_OTU182_5de33cdde456fd8ec02278e76071ed9c, putative proteorhodopsin gene, partial cds. PRGD_OTU182_5de33cdde456fd8ec02278e76071ed9c, putative proteorhodopsin gene, partial cds. KJ929652 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 3]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 3 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) CTGATCACCGTACCGTTGCTGATGATTGAGTTCTACCTGATTCTGTCCGCTATCACCAAGGTTCCTGTTGGCGTTTTCTGGCGCCTCATGATCGGTACGTTGGTGATGTTGATCGGTGGTTACTTGGGCGAAGCCGGCTACATGCCTGTGTTGCCTGCATTCATCATTGGCATGCTGGGCTGGGCTTACATCTTGTATGAAATTTTCATGGGCCAGGCCAGCAAGATCAACGCCGAAAAAGCTCCAGCTTCAGTCCAGTCGGCCTTCAATACAATGCGTTTGATTGTGACCATC LITVPLLMIEFYLILSAITKVPVGVFWRLMIGTLVMLIGGYLGEAGYMPVLPAFIIGMLGWAYILYEIFMGQASKINAEKAPASVQSAFNTMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTACCGTTGCTGATGATTGAGTTCTACCTGATTCTGTCCGCT---------ATC---ACCAAGGTTCCTGTT---GGCGTT------------------------------------TTCTGGCGC---CTCATGATCGGTACGTTGGTGATGTTGATCGGTGGTTACTTGGGCGAA---------GCC------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------CCTGTG------------------TTGCCTGCA---TTCATCATTGGCATGCTGGGCTGGGCTTACATCTTGTATGAAATT---------------TTC------ATG---GGCCAGGCCAGCAAGATCAACGCCGAA------AAA---GCTCCAGCTTCAGTC---CAG---TCG---GCC---TTC---AAT---ACAATG---CGTTTGATTGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILSA---I-TKVPV-GV------------FWR-LMIGTLVMLIGGYLGE---A------G--Y-----------M----------------------PV------LPA-FIIGMLGWAYILYEI-----F--M-GQASKINAE--K-APASV-Q-S-A-F-N-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-a]_KJ927971 [III-Alpha6-a] PRGD_OTU021a_0a255538753a2f74e1416d3561a6fa79 gb|KJ927971| PRGD_OTU021a_0a255538753a2f74e1416d3561a6fa79, putative proteorhodopsin gene, partial cds. PRGD_OTU021a_0a255538753a2f74e1416d3561a6fa79, putative proteorhodopsin gene, partial cds. KJ927971 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) CTGATCACAGTGCCATTGCTGATGGTTGAGTTCTATCTCATCCTGCGGGCCATTGGCAACGTGTCCGGTGGTATCTTCTGGCGTCTGATGATCGGTACACTGGTCATGCTTGTCGGCGGATATGCCGGTGAAATCGGCTATATCAACGTATGGCTTGGTTTCATCATCGGAATGGCCGGCTGGGCCTACATTCTGTATGAGATCTTTGCTGGTGAAGCTGGCAAGATGTCAGCAGATCAGGCTCCGGAGTCCGTCAAGTCTGCATTCTCGACAATGCGCTGGATTGTGACAATC LITVPLLMVEFYLILRAIGNVSGGIFWRLMIGTLVMLVGGYAGEIGYINVWLGFIIGMAGWAYILYEIFAGEAGKMSADQAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTGCCATTGCTGATGGTTGAGTTCTATCTCATCCTGCGGGCC---------ATT---GGCAACGTGTCCGGT---GGTATC------------------------------------TTCTGGCGT---CTGATGATCGGTACACTGGTCATGCTTGTCGGCGGATATGCCGGTGAA---------ATC------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AACGTA------------------TGGCTTGGT---TTCATCATCGGAATGGCCGGCTGGGCCTACATTCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGATGTCAGCAGAT------CAG---GCTCCGGAGTCCGTC---AAG---TCT---GCA---TTC---TCG---ACAATG---CGCTGGATTGTGACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-GNVSG-GI------------FWR-LMIGTLVMLVGGYAGE---I------G--Y-----------I----------------------NV------WLG-FIIGMAGWAYILYEI-----F--A-GEAGKMSAD--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-a]_KJ927989 [III-Alpha6-a] PRGD_OTU021a_76e2ea356c4dcef4de8b50f12dd118a7 gb|KJ927989| PRGD_OTU021a_76e2ea356c4dcef4de8b50f12dd118a7, putative proteorhodopsin gene, partial cds. PRGD_OTU021a_76e2ea356c4dcef4de8b50f12dd118a7, putative proteorhodopsin gene, partial cds. KJ927989 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTGATCACAGTGCCATTGCTGATGGTTGAGTTCTATCTCATCCTGCGGGCCATCGGCAACGTGTCCGGTGGTATCTTCTGGCGTCTGATGATCGGTACACTGGTCATGCTTGTTGGCGGATATGCCGGTGAAATCGGCTATATCAACGAATGGCTTGGTTTCATCATTGGAATGGCCGGTTGGGCCTACATTCTGTATGAGATCTTTGCTGGTGAAGCTGGCAAGATGTCAGCAGATCAGGCTCCGGAGTCTGTCAAGTCTGCATTCTCCACAATGCGCTGGATTGTGACAATC LITVPLLMVEFYLILRAIGNVSGGIFWRLMIGTLVMLVGGYAGEIGYINEWLGFIIGMAGWAYILYEIFAGEAGKMSADQAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTGCCATTGCTGATGGTTGAGTTCTATCTCATCCTGCGGGCC---------ATC---GGCAACGTGTCCGGT---GGTATC------------------------------------TTCTGGCGT---CTGATGATCGGTACACTGGTCATGCTTGTTGGCGGATATGCCGGTGAA---------ATC------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AACGAA------------------TGGCTTGGT---TTCATCATTGGAATGGCCGGTTGGGCCTACATTCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGATGTCAGCAGAT------CAG---GCTCCGGAGTCTGTC---AAG---TCT---GCA---TTC---TCC---ACAATG---CGCTGGATTGTGACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-GNVSG-GI------------FWR-LMIGTLVMLVGGYAGE---I------G--Y-----------I----------------------NE------WLG-FIIGMAGWAYILYEI-----F--A-GEAGKMSAD--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-a]_KJ927990 [III-Alpha6-a] PRGD_OTU021a_813bef850b7297f98284afc41356f9a8 gb|KJ927990| PRGD_OTU021a_813bef850b7297f98284afc41356f9a8, putative proteorhodopsin gene, partial cds. PRGD_OTU021a_813bef850b7297f98284afc41356f9a8, putative proteorhodopsin gene, partial cds. KJ927990 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATCACAGTGCCATTGCTCATGGTTGAGTTCTACCTCATCCTGCGGGCCATTGGCAACGTGTCCGGTGGTATCTTCTGGCGTCTGATGATCGGTACACTGGTCATGCTTGTTGGCGGATATGCCGGTGAAATTGGCTATATCAACGAATGGCTTGGTTTCATCATTGGAATGGCCGGTTGGGCCTACATTCTGTATGAGATCTTTGCTGGTGAAGCTGGCAAGATGTCAGCAGATCAGGCTCCGGAGTCCGTCAAATCTGCATTCTCGACAATGCGTTGGATTGTGACAATC LITVPLLMVEFYLILRAIGNVSGGIFWRLMIGTLVMLVGGYAGEIGYINEWLGFIIGMAGWAYILYEIFAGEAGKMSADQAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTGCCATTGCTCATGGTTGAGTTCTACCTCATCCTGCGGGCC---------ATT---GGCAACGTGTCCGGT---GGTATC------------------------------------TTCTGGCGT---CTGATGATCGGTACACTGGTCATGCTTGTTGGCGGATATGCCGGTGAA---------ATT------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AACGAA------------------TGGCTTGGT---TTCATCATTGGAATGGCCGGTTGGGCCTACATTCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGATGTCAGCAGAT------CAG---GCTCCGGAGTCCGTC---AAA---TCT---GCA---TTC---TCG---ACAATG---CGTTGGATTGTGACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-GNVSG-GI------------FWR-LMIGTLVMLVGGYAGE---I------G--Y-----------I----------------------NE------WLG-FIIGMAGWAYILYEI-----F--A-GEAGKMSAD--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-a]_KJ927983 [III-Alpha6-a] PRGD_OTU021a_4922c2550b65ec630af4b7d4e5928982 gb|KJ927983| PRGD_OTU021a_4922c2550b65ec630af4b7d4e5928982, putative proteorhodopsin gene, partial cds. PRGD_OTU021a_4922c2550b65ec630af4b7d4e5928982, putative proteorhodopsin gene, partial cds. KJ927983 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTGATCACAGTGCCATTGCTGATGGTTGAGTTCTATCTCATCCTGCGGGCCATTGGTAACGTGTCCGGTGGTATATTCTGGCGTCTGATGATCGGTACACTGGTCATGCTTGTTGGCGGATATGCCGGTGAAATCGGCTATATCAACGAATGGCTTGGTTTCATTATCGGAATGGCCGGTTGGGCCTATATTCTGTATGAGATCTTTGCTGGTGAAGCTGGCAAGATGTCAGCAGATCAGGCTCCGGAGTCCGTTAAGTCTGCATTCTCGACGATGCGCTGGATTGTGACAATC LITVPLLMVEFYLILRAIGNVSGGIFWRLMIGTLVMLVGGYAGEIGYINEWLGFIIGMAGWAYILYEIFAGEAGKMSADQAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTGCCATTGCTGATGGTTGAGTTCTATCTCATCCTGCGGGCC---------ATT---GGTAACGTGTCCGGT---GGTATA------------------------------------TTCTGGCGT---CTGATGATCGGTACACTGGTCATGCTTGTTGGCGGATATGCCGGTGAA---------ATC------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AACGAA------------------TGGCTTGGT---TTCATTATCGGAATGGCCGGTTGGGCCTATATTCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGATGTCAGCAGAT------CAG---GCTCCGGAGTCCGTT---AAG---TCT---GCA---TTC---TCG---ACGATG---CGCTGGATTGTGACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-GNVSG-GI------------FWR-LMIGTLVMLVGGYAGE---I------G--Y-----------I----------------------NE------WLG-FIIGMAGWAYILYEI-----F--A-GEAGKMSAD--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-a]_KJ927978 [III-Alpha6-a] PRGD_OTU021a_296e7c12eeab04dec9ebdde9fb6d1062 gb|KJ927978| PRGD_OTU021a_296e7c12eeab04dec9ebdde9fb6d1062, putative proteorhodopsin gene, partial cds. PRGD_OTU021a_296e7c12eeab04dec9ebdde9fb6d1062, putative proteorhodopsin gene, partial cds. KJ927978 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -33.9602, -73.3769), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) CTGATCACAGTGCCATTGCTGATGGTTGAGTTCTATCTCATCCTGCGGGCTATTGGCAACGTGTCCGGTGGTATCTTTTGGCGTCTGATGATCGGTACACTGGTCATGCTTGTTGGCGGATATGCCGGTGAAATCGGCTATATCAACGAATGGCTTGGTTTTATCATCGGAATGGCCGGTTGGGCCTACATTCTTTATGAGATCTTTGCTGGTGAAGCTGGCAAGATGTCAGCAGATCAGGCTCCGGAGTCCGTCAAGTCTGCATTCTCGACAATGCGCTGGATTGTGACAATC LITVPLLMVEFYLILRAIGNVSGGIFWRLMIGTLVMLVGGYAGEIGYINEWLGFIIGMAGWAYILYEIFAGEAGKMSADQAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTGCCATTGCTGATGGTTGAGTTCTATCTCATCCTGCGGGCT---------ATT---GGCAACGTGTCCGGT---GGTATC------------------------------------TTTTGGCGT---CTGATGATCGGTACACTGGTCATGCTTGTTGGCGGATATGCCGGTGAA---------ATC------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AACGAA------------------TGGCTTGGT---TTTATCATCGGAATGGCCGGTTGGGCCTACATTCTTTATGAGATC---------------TTT------GCT---GGTGAAGCTGGCAAGATGTCAGCAGAT------CAG---GCTCCGGAGTCCGTC---AAG---TCT---GCA---TTC---TCG---ACAATG---CGCTGGATTGTGACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-GNVSG-GI------------FWR-LMIGTLVMLVGGYAGE---I------G--Y-----------I----------------------NE------WLG-FIIGMAGWAYILYEI-----F--A-GEAGKMSAD--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-a]_KJ927987 [III-Alpha6-a] PRGD_OTU021a_66cad4708fd25ec7e821b3fb500438e6 gb|KJ927987| PRGD_OTU021a_66cad4708fd25ec7e821b3fb500438e6, putative proteorhodopsin gene, partial cds. PRGD_OTU021a_66cad4708fd25ec7e821b3fb500438e6, putative proteorhodopsin gene, partial cds. KJ927987 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45; -33.28, 45.35) CTGATCACAGTGCCATTGTTGATGGTTGAGTTCTATCTCATCCTGCGGGCCATTGGAGAAGTATCTGGCGGCATTTTCTGGCGCTTGATGATTGGTACATTGATCATGCTGGTCGGCGGATATGCTGGTGAGGTTGGCTACATTAATGAGTGGCTCGGCTTCATCATCGGAATGGCCGGTTGGGCCTACATCCTTTATGAGGTCTTTGCTGGTGAAGCTGGCAAGATGTCAGCGGATCAGGCTCCCGAGTCTGTCAAGTCTGCATTCTCAACAATGCGCTGGATTGTAACAATC LITVPLLMVEFYLILRAIGEVSGGIFWRLMIGTLIMLVGGYAGEVGYINEWLGFIIGMAGWAYILYEVFAGEAGKMSADQAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTGCCATTGTTGATGGTTGAGTTCTATCTCATCCTGCGGGCC---------ATT---GGAGAAGTATCTGGC---GGCATT------------------------------------TTCTGGCGC---TTGATGATTGGTACATTGATCATGCTGGTCGGCGGATATGCTGGTGAG---------GTT------------------GGC------TAC---------------------------------ATT------------------------------------------------------------------AATGAG------------------TGGCTCGGC---TTCATCATCGGAATGGCCGGTTGGGCCTACATCCTTTATGAGGTC---------------TTT------GCT---GGTGAAGCTGGCAAGATGTCAGCGGAT------CAG---GCTCCCGAGTCTGTC---AAG---TCT---GCA---TTC---TCA---ACAATG---CGCTGGATTGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-GEVSG-GI------------FWR-LMIGTLIMLVGGYAGE---V------G--Y-----------I----------------------NE------WLG-FIIGMAGWAYILYEV-----F--A-GEAGKMSAD--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-a]_KJ927973 [III-Alpha6-a] PRGD_OTU021a_157156e9a79ea2abdb443ab5a5a5d80e gb|KJ927973| PRGD_OTU021a_157156e9a79ea2abdb443ab5a5a5d80e, putative proteorhodopsin gene, partial cds. PRGD_OTU021a_157156e9a79ea2abdb443ab5a5a5d80e, putative proteorhodopsin gene, partial cds. KJ927973 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTGATCACAGTGCCATTGTTGATGGTTGAGTTCTATCTCATCCTGCGGGCCATTGGAGAAGTATCTGGCGGCATTTTCTGGCGCTTGATGATTGGTACATTGGTCATGCTGGTCGGCGGATATGCTGGTGAGGTTGGCTACATCAATGAGTGGCTCGGCTTCATCATCGGAATGGCCGGTTGGGCCTACATCCTGTATGAGGTCTTTGCTGGTGAAGCTGGCAAGATGTCAGCGGATCAGGCTCCTGAGTCCGTCAAGTCTGCATTCTCAACAATGCGCTGGATTGTAACAATC LITVPLLMVEFYLILRAIGEVSGGIFWRLMIGTLVMLVGGYAGEVGYINEWLGFIIGMAGWAYILYEVFAGEAGKMSADQAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTGCCATTGTTGATGGTTGAGTTCTATCTCATCCTGCGGGCC---------ATT---GGAGAAGTATCTGGC---GGCATT------------------------------------TTCTGGCGC---TTGATGATTGGTACATTGGTCATGCTGGTCGGCGGATATGCTGGTGAG---------GTT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGAG------------------TGGCTCGGC---TTCATCATCGGAATGGCCGGTTGGGCCTACATCCTGTATGAGGTC---------------TTT------GCT---GGTGAAGCTGGCAAGATGTCAGCGGAT------CAG---GCTCCTGAGTCCGTC---AAG---TCT---GCA---TTC---TCA---ACAATG---CGCTGGATTGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-GEVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------NE------WLG-FIIGMAGWAYILYEV-----F--A-GEAGKMSAD--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-a]_KJ927980 [III-Alpha6-a] PRGD_OTU021a_34fbc3c6cc843a87beee42a083401fb7 gb|KJ927980| PRGD_OTU021a_34fbc3c6cc843a87beee42a083401fb7, putative proteorhodopsin gene, partial cds. PRGD_OTU021a_34fbc3c6cc843a87beee42a083401fb7, putative proteorhodopsin gene, partial cds. KJ927980 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683) TTGATCACAGTGCCGCTTCTCATGGTTGAGTTCTATTTGATCCTAAGAGCCATTGGCAATGTATCTGGTGGTATCTTCTGGCGTCTGATGATTGGTACGCTCGTCATGTTGGTCGGTGGTTATGCTGGCGAGGTTGGCTACATCAATGCGTGGCTCGGCTTCATCATCGGTATGGCTGGTTGGGCATACATCCTGTATGAAGTCTTCGCCGGTGAAGCTGGCAAGATGTCTGCTGAGCAGGCCCCTGAGTCAGTGAAGTCTGCATTCTCGACAATGCGCTGGATTGTAACCATC LITVPLLMVEFYLILRAIGNVSGGIFWRLMIGTLVMLVGGYAGEVGYINAWLGFIIGMAGWAYILYEVFAGEAGKMSAEQAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCGCTTCTCATGGTTGAGTTCTATTTGATCCTAAGAGCC---------ATT---GGCAATGTATCTGGT---GGTATC------------------------------------TTCTGGCGT---CTGATGATTGGTACGCTCGTCATGTTGGTCGGTGGTTATGCTGGCGAG---------GTT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCG------------------TGGCTCGGC---TTCATCATCGGTATGGCTGGTTGGGCATACATCCTGTATGAAGTC---------------TTC------GCC---GGTGAAGCTGGCAAGATGTCTGCTGAG------CAG---GCCCCTGAGTCAGTG---AAG---TCT---GCA---TTC---TCG---ACAATG---CGCTGGATTGTAACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-GNVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------NA------WLG-FIIGMAGWAYILYEV-----F--A-GEAGKMSAE--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-a]_KJ927975 [III-Alpha6-a] PRGD_OTU021a_1a4963ab55e310e5904b27eb2630e64d gb|KJ927975| PRGD_OTU021a_1a4963ab55e310e5904b27eb2630e64d, putative proteorhodopsin gene, partial cds. PRGD_OTU021a_1a4963ab55e310e5904b27eb2630e64d, putative proteorhodopsin gene, partial cds. KJ927975 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; ; 67.49, -168.12), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) TTGATTACCGTGCCGTTGCTGATGGTGGAATTCTATCTGATCCTTCGTGCCGTTGGCAGCGCGTCGGGCGGTATCTTCTGGAAGTTGATGATTGGTACATTGGTCATGCTCATAGGCGGTTACGCCGGTGAAGTTGGTTACATCAATGCGACGCTCGGCTTTGTTATTGGTATGGCTGGTTGGGCGTACATCCTTTATGAGATCTTCCTAGGTGAAGCTGGCAAGATGTCAGCCGAGAAGGCACCAGCATCAGTTAAGTCCGCGTTCTCTCTGATGCGTTGGATCGTAACTATT LITVPLLMVEFYLILRAVGSASGGIFWKLMIGTLVMLIGGYAGEVGYINATLGFVIGMAGWAYILYEIFLGEAGKMSAEKAPASVKSAFSLMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACCGTGCCGTTGCTGATGGTGGAATTCTATCTGATCCTTCGTGCC---------GTT---GGCAGCGCGTCGGGC---GGTATC------------------------------------TTCTGGAAG---TTGATGATTGGTACATTGGTCATGCTCATAGGCGGTTACGCCGGTGAA---------GTT------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCG------------------ACGCTCGGC---TTTGTTATTGGTATGGCTGGTTGGGCGTACATCCTTTATGAGATC---------------TTC------CTA---GGTGAAGCTGGCAAGATGTCAGCCGAG------AAG---GCACCAGCATCAGTT---AAG---TCC---GCG---TTC---TCT---CTGATG---CGTTGGATCGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-GSASG-GI------------FWK-LMIGTLVMLIGGYAGE---V------G--Y-----------I----------------------NA------TLG-FVIGMAGWAYILYEI-----F--L-GEAGKMSAE--K-APASV-K-S-A-F-S-LM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-a]_KJ927985 [III-Alpha6-a] PRGD_OTU021a_5d145a279675be11774b040f7781f96b gb|KJ927985| PRGD_OTU021a_5d145a279675be11774b040f7781f96b, putative proteorhodopsin gene, partial cds. PRGD_OTU021a_5d145a279675be11774b040f7781f96b, putative proteorhodopsin gene, partial cds. KJ927985 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683) TTGATTACCGTGCCGTTGCTGATGGTGGAATTCTATCTGATCCTTCGTGCCGTTGGCAGCGCGTCGGGCGGTATCTTCTGGAAGTTGATGATTGGTACATTGGTCATGCTCGTAGGCGGTTACGCCGGTGAAGTTGGTTACATCAATGCGACGCTCGGCTTTGTTATTGGTATGGTTGGTTGGGCGTACATCCTTTATGAGATCTTCCTAGGTGAAGCTGGCAAAATGTCAGCCGAGAAGGCACCAGCATCAGTTAAGTCCGCGTTCTCTCTGATGCGTTGGATCGTAACTATT LITVPLLMVEFYLILRAVGSASGGIFWKLMIGTLVMLVGGYAGEVGYINATLGFVIGMVGWAYILYEIFLGEAGKMSAEKAPASVKSAFSLMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACCGTGCCGTTGCTGATGGTGGAATTCTATCTGATCCTTCGTGCC---------GTT---GGCAGCGCGTCGGGC---GGTATC------------------------------------TTCTGGAAG---TTGATGATTGGTACATTGGTCATGCTCGTAGGCGGTTACGCCGGTGAA---------GTT------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCG------------------ACGCTCGGC---TTTGTTATTGGTATGGTTGGTTGGGCGTACATCCTTTATGAGATC---------------TTC------CTA---GGTGAAGCTGGCAAAATGTCAGCCGAG------AAG---GCACCAGCATCAGTT---AAG---TCC---GCG---TTC---TCT---CTGATG---CGTTGGATCGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-GSASG-GI------------FWK-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------NA------TLG-FVIGMVGWAYILYEI-----F--L-GEAGKMSAE--K-APASV-K-S-A-F-S-LM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-a]_KJ927996 [III-Alpha6-a] PRGD_OTU021a_f01756ce0d4e7e64076b24c11d2b094a gb|KJ927996| PRGD_OTU021a_f01756ce0d4e7e64076b24c11d2b094a, putative proteorhodopsin gene, partial cds. PRGD_OTU021a_f01756ce0d4e7e64076b24c11d2b094a, putative proteorhodopsin gene, partial cds. KJ927996 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATTACCGTGCCGTTGCTGATGGTGGAATTCTATCTGATCCTTCGTGCCGTTGGCAGCGCGTCGGGCGGTATCTTCTGGAAGTTGATGATTGGTACATTGGTCATGCTCATAGGCGGTTACGCCGGTGAAGTTGGTTACATCAATGCGACGCTCGGCTTTGTTATTGGTATGGTTGGTTGGGCGTACATCCTTTATGAGATCTTCCTAGGTGAAGCTGGTAAGATGTCAGCCGAGAAGGCACCAGCATCAGTTAAGTCCGCGTTCTCTCTGATGCGTTGGATCGTAACTATT LITVPLLMVEFYLILRAVGSASGGIFWKLMIGTLVMLIGGYAGEVGYINATLGFVIGMVGWAYILYEIFLGEAGKMSAEKAPASVKSAFSLMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACCGTGCCGTTGCTGATGGTGGAATTCTATCTGATCCTTCGTGCC---------GTT---GGCAGCGCGTCGGGC---GGTATC------------------------------------TTCTGGAAG---TTGATGATTGGTACATTGGTCATGCTCATAGGCGGTTACGCCGGTGAA---------GTT------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCG------------------ACGCTCGGC---TTTGTTATTGGTATGGTTGGTTGGGCGTACATCCTTTATGAGATC---------------TTC------CTA---GGTGAAGCTGGTAAGATGTCAGCCGAG------AAG---GCACCAGCATCAGTT---AAG---TCC---GCG---TTC---TCT---CTGATG---CGTTGGATCGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-GSASG-GI------------FWK-LMIGTLVMLIGGYAGE---V------G--Y-----------I----------------------NA------TLG-FVIGMVGWAYILYEI-----F--L-GEAGKMSAE--K-APASV-K-S-A-F-S-LM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-a]_KJ927982 [III-Alpha6-a] PRGD_OTU021a_400673e10a75b5a80d4ffcbf9b346a4c gb|KJ927982| PRGD_OTU021a_400673e10a75b5a80d4ffcbf9b346a4c, putative proteorhodopsin gene, partial cds. PRGD_OTU021a_400673e10a75b5a80d4ffcbf9b346a4c, putative proteorhodopsin gene, partial cds. KJ927982 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATTACCGTGCCGTTGCTGATGGTGGAATTCTATCTGATTCTTCGTGCCGTTGGCAGCGCGTCGGGCGGTATCTTCTGGAAGTTGATGATTGGTACATTGGTCATGCTCATAGGCGGTTACGCCGGTGAAGTTGGTTACATCAATGCGACGCTCGGCTTTGTTATTGGTATGGTCGGTTGGGCGTACATCCTTTATGAGATCTTCCTAGGTGAAGCTGGCAAGATGTCAGCCGAGAAGGCACCAGCATCAGTTAAGTCCGCGTTCTCTCTGATGCGTTGGATCGTAACTATT LITVPLLMVEFYLILRAVGSASGGIFWKLMIGTLVMLIGGYAGEVGYINATLGFVIGMVGWAYILYEIFLGEAGKMSAEKAPASVKSAFSLMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACCGTGCCGTTGCTGATGGTGGAATTCTATCTGATTCTTCGTGCC---------GTT---GGCAGCGCGTCGGGC---GGTATC------------------------------------TTCTGGAAG---TTGATGATTGGTACATTGGTCATGCTCATAGGCGGTTACGCCGGTGAA---------GTT------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCG------------------ACGCTCGGC---TTTGTTATTGGTATGGTCGGTTGGGCGTACATCCTTTATGAGATC---------------TTC------CTA---GGTGAAGCTGGCAAGATGTCAGCCGAG------AAG---GCACCAGCATCAGTT---AAG---TCC---GCG---TTC---TCT---CTGATG---CGTTGGATCGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-GSASG-GI------------FWK-LMIGTLVMLIGGYAGE---V------G--Y-----------I----------------------NA------TLG-FVIGMVGWAYILYEI-----F--L-GEAGKMSAE--K-APASV-K-S-A-F-S-LM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-a]_KJ927984 [III-Alpha6-a] PRGD_OTU021a_50a0e781e3c78bd17f7909f663c7b12e gb|KJ927984| PRGD_OTU021a_50a0e781e3c78bd17f7909f663c7b12e, putative proteorhodopsin gene, partial cds. PRGD_OTU021a_50a0e781e3c78bd17f7909f663c7b12e, putative proteorhodopsin gene, partial cds. KJ927984 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) TTGATTACCGTGCCGTTGCTGATGGTGGAATTTTATCTGATCCTTCGTGCTGTTGGCAGCGCGTCGGGGGGTATCTTCTGGAAGTTGATGATTGGTACATTGGTCATGCTCATCGGCGGTTACGCCGGTGAAGTTGGCTACATCAATGCGACGCTCGGCTTTGTTATTGGTATGGTTGGTTGGGCGTACATCCTTTATGAGATCTTCCTAGGTGAAGCTGGCAAGATGTCAGCCGAGAAGGCACCAGCATCCGTTAAGTCCGCGTTCTCTCTGATGCGTTGGATCGTAACTATT LITVPLLMVEFYLILRAVGSASGGIFWKLMIGTLVMLIGGYAGEVGYINATLGFVIGMVGWAYILYEIFLGEAGKMSAEKAPASVKSAFSLMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACCGTGCCGTTGCTGATGGTGGAATTTTATCTGATCCTTCGTGCT---------GTT---GGCAGCGCGTCGGGG---GGTATC------------------------------------TTCTGGAAG---TTGATGATTGGTACATTGGTCATGCTCATCGGCGGTTACGCCGGTGAA---------GTT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCG------------------ACGCTCGGC---TTTGTTATTGGTATGGTTGGTTGGGCGTACATCCTTTATGAGATC---------------TTC------CTA---GGTGAAGCTGGCAAGATGTCAGCCGAG------AAG---GCACCAGCATCCGTT---AAG---TCC---GCG---TTC---TCT---CTGATG---CGTTGGATCGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-GSASG-GI------------FWK-LMIGTLVMLIGGYAGE---V------G--Y-----------I----------------------NA------TLG-FVIGMVGWAYILYEI-----F--L-GEAGKMSAE--K-APASV-K-S-A-F-S-LM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-a]_KJ927972 [III-Alpha6-a] PRGD_OTU021a_1157494e1724dafd3b6abc2e50da156b gb|KJ927972| PRGD_OTU021a_1157494e1724dafd3b6abc2e50da156b, putative proteorhodopsin gene, partial cds. PRGD_OTU021a_1157494e1724dafd3b6abc2e50da156b, putative proteorhodopsin gene, partial cds. KJ927972 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATTACTGTGCCGTTGCTGATGGTGGAATTTTATCTGATCCTTCGTGCCGTTGGCAGCGCGTCAGGCGGTATCTTCTGGAAGCTGATGATCGGTACGTTGGTCATGCTCATAGGCGGTTACGCCGGTGAAGTTGGTTACATCAATGCGTTGCTCGGCTTTGTGATTGGTATGGTTGGCTGGGCGTACATCCTATATGAGATCTTCCTAGGGGAAGCTGGCAAGATGTCGGCCGAGAAGGCGCCAGCATCGGTGAAATCTGCGTTTTCTTTAATGCGTTGGATCGTGACCATT LITVPLLMVEFYLILRAVGSASGGIFWKLMIGTLVMLIGGYAGEVGYINALLGFVIGMVGWAYILYEIFLGEAGKMSAEKAPASVKSAFSLMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCGTTGCTGATGGTGGAATTTTATCTGATCCTTCGTGCC---------GTT---GGCAGCGCGTCAGGC---GGTATC------------------------------------TTCTGGAAG---CTGATGATCGGTACGTTGGTCATGCTCATAGGCGGTTACGCCGGTGAA---------GTT------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCG------------------TTGCTCGGC---TTTGTGATTGGTATGGTTGGCTGGGCGTACATCCTATATGAGATC---------------TTC------CTA---GGGGAAGCTGGCAAGATGTCGGCCGAG------AAG---GCGCCAGCATCGGTG---AAA---TCT---GCG---TTT---TCT---TTAATG---CGTTGGATCGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-GSASG-GI------------FWK-LMIGTLVMLIGGYAGE---V------G--Y-----------I----------------------NA------LLG-FVIGMVGWAYILYEI-----F--L-GEAGKMSAE--K-APASV-K-S-A-F-S-LM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-a]_KJ927995 [III-Alpha6-a] PRGD_OTU021a_d1bb290ab595c071bcb49c2dfe7952c6 gb|KJ927995| PRGD_OTU021a_d1bb290ab595c071bcb49c2dfe7952c6, putative proteorhodopsin gene, partial cds. PRGD_OTU021a_d1bb290ab595c071bcb49c2dfe7952c6, putative proteorhodopsin gene, partial cds. KJ927995 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATTACCGTGCCGTTGCTGATGGTGGAATTTTATCTGATCCTTCGTGCCGTTGGCAGCGCGTCAGGCGGTATCTTCTGGAAGCTGATGATCGGTACATTGGTCATGCTCATAGGCGGTTACGCCGGTGAAGTTGGTTACATCAATGCGTTGCTCGGCTTTGTGATTGGTATGGTTGGCTGGGCGTACATCCTATATGAGATCTTCCTAGGTGAAGCTGGCAAGATGTCGGCCGAGAAGGCGCCAGCATCGGTGAAATCCGCGTTTTCTTTAATGCGTTGGATCGTGACCATT LITVPLLMVEFYLILRAVGSASGGIFWKLMIGTLVMLIGGYAGEVGYINALLGFVIGMVGWAYILYEIFLGEAGKMSAEKAPASVKSAFSLMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACCGTGCCGTTGCTGATGGTGGAATTTTATCTGATCCTTCGTGCC---------GTT---GGCAGCGCGTCAGGC---GGTATC------------------------------------TTCTGGAAG---CTGATGATCGGTACATTGGTCATGCTCATAGGCGGTTACGCCGGTGAA---------GTT------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCG------------------TTGCTCGGC---TTTGTGATTGGTATGGTTGGCTGGGCGTACATCCTATATGAGATC---------------TTC------CTA---GGTGAAGCTGGCAAGATGTCGGCCGAG------AAG---GCGCCAGCATCGGTG---AAA---TCC---GCG---TTT---TCT---TTAATG---CGTTGGATCGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-GSASG-GI------------FWK-LMIGTLVMLIGGYAGE---V------G--Y-----------I----------------------NA------LLG-FVIGMVGWAYILYEI-----F--L-GEAGKMSAE--K-APASV-K-S-A-F-S-LM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-a]_KJ927974 [III-Alpha6-a] PRGD_OTU021a_182d413a18f7bc87fad64a5ef5385b79 gb|KJ927974| PRGD_OTU021a_182d413a18f7bc87fad64a5ef5385b79, putative proteorhodopsin gene, partial cds. PRGD_OTU021a_182d413a18f7bc87fad64a5ef5385b79, putative proteorhodopsin gene, partial cds. KJ927974 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-35.05, 23.73) CTCATTACTGTTCCGTTGCTGATGATTGAATTTTATTTAATTCTTCGTGCCATTGGCAGCGCTTCAGGAGGAATATTCTGGCGGCTGATGATCGGCACATTGGTCATGCTCGTAGGCGGTTACGCCGGTGAAATTGGCTACGTCAATGTTTGGCTTGGCTTTGGCATTGGCATGGCAGGCTGGGCATTCATTCTCTATGAGATCTTCCTGGGTGAAGCAGGCAAGATGTCAGCAGAGCATGCACCACCATCGGTCAAGTCAGCGTTTTCGACAATGCGTTGGATCGTGACCATT LITVPLLMIEFYLILRAIGSASGGIFWRLMIGTLVMLVGGYAGEIGYVNVWLGFGIGMAGWAFILYEIFLGEAGKMSAEHAPPSVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATTACTGTTCCGTTGCTGATGATTGAATTTTATTTAATTCTTCGTGCC---------ATT---GGCAGCGCTTCAGGA---GGAATA------------------------------------TTCTGGCGG---CTGATGATCGGCACATTGGTCATGCTCGTAGGCGGTTACGCCGGTGAA---------ATT------------------GGC------TAC---------------------------------GTC------------------------------------------------------------------AATGTT------------------TGGCTTGGC---TTTGGCATTGGCATGGCAGGCTGGGCATTCATTCTCTATGAGATC---------------TTC------CTG---GGTGAAGCAGGCAAGATGTCAGCAGAG------CAT---GCACCACCATCGGTC---AAG---TCA---GCG---TTT---TCG---ACAATG---CGTTGGATCGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-GSASG-GI------------FWR-LMIGTLVMLVGGYAGE---I------G--Y-----------V----------------------NV------WLG-FGIGMAGWAFILYEI-----F--L-GEAGKMSAE--H-APPSV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-a]_KJ927993 [III-Alpha6-a] PRGD_OTU021a_ba88f6eb46afa7a73d119561f98a8678 gb|KJ927993| PRGD_OTU021a_ba88f6eb46afa7a73d119561f98a8678, putative proteorhodopsin gene, partial cds. PRGD_OTU021a_ba88f6eb46afa7a73d119561f98a8678, putative proteorhodopsin gene, partial cds. KJ927993 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683) TTGATCACAGTGCCATTGCTGATGGTCGAATTCTATTTGATCCTGCGTGCCATTGGCAGCGCATCTGGCGGCATCTTCTGGCGTCTGATGATCGGTACATTGGTCATGCTCGTAGGCGGTTATGCCGGTGAAGTTGGCTACATCAATGCGTGGCTTGGCTTTATCATTGGTATGGCTGGTTGGGCGTACATCCTATATGAGATCTTTGCAGGTGAAGCCGGCAAGATGTCAGCCGATCAGGCGCCAGCCTCGGTTAAGTCTGCGTTTTCTACAATGCGTTGGATTGTAACCATT LITVPLLMVEFYLILRAIGSASGGIFWRLMIGTLVMLVGGYAGEVGYINAWLGFIIGMAGWAYILYEIFAGEAGKMSADQAPASVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCATTGCTGATGGTCGAATTCTATTTGATCCTGCGTGCC---------ATT---GGCAGCGCATCTGGC---GGCATC------------------------------------TTCTGGCGT---CTGATGATCGGTACATTGGTCATGCTCGTAGGCGGTTATGCCGGTGAA---------GTT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCG------------------TGGCTTGGC---TTTATCATTGGTATGGCTGGTTGGGCGTACATCCTATATGAGATC---------------TTT------GCA---GGTGAAGCCGGCAAGATGTCAGCCGAT------CAG---GCGCCAGCCTCGGTT---AAG---TCT---GCG---TTT---TCT---ACAATG---CGTTGGATTGTAACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-GSASG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------NA------WLG-FIIGMAGWAYILYEI-----F--A-GEAGKMSAD--Q-APASV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-a]_KJ927988 [III-Alpha6-a] PRGD_OTU021a_76c145402405adb6095fa70cb76655fb gb|KJ927988| PRGD_OTU021a_76c145402405adb6095fa70cb76655fb, putative proteorhodopsin gene, partial cds. PRGD_OTU021a_76c145402405adb6095fa70cb76655fb, putative proteorhodopsin gene, partial cds. KJ927988 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-35.05, 23.73) TTAATTACTGTACCCCTACTGATGGTTGAGTTCTATCTTATCCTGCGTGCAGTGGGTAGTGCTTCTGCAGGCATCTTCTGGCGCATCATGATAGGAACGTTGGTCATGCTAGTTGGCGGATATGCCGGCGAAGTCGGTTATATCAACCAGTGGCTTGGTTTCATCATTGGAATGGCAGGTTGGGCATACATTCTGTATGAAATCTTCCTCGGTGAAGCCGGCAAAATGTCTGCCGACCAGGCACCGGCTTCAGTTAAATCAGCATTCTCGACAATGCGGTGGATTGTGACCGTT LITVPLLMVEFYLILRAVGSASAGIFWRIMIGTLVMLVGGYAGEVGYINQWLGFIIGMAGWAYILYEIFLGEAGKMSADQAPASVKSAFSTMRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCCCTACTGATGGTTGAGTTCTATCTTATCCTGCGTGCA---------GTG---GGTAGTGCTTCTGCA---GGCATC------------------------------------TTCTGGCGC---ATCATGATAGGAACGTTGGTCATGCTAGTTGGCGGATATGCCGGCGAA---------GTC------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------AACCAG------------------TGGCTTGGT---TTCATCATTGGAATGGCAGGTTGGGCATACATTCTGTATGAAATC---------------TTC------CTC---GGTGAAGCCGGCAAAATGTCTGCCGAC------CAG---GCACCGGCTTCAGTT---AAA---TCA---GCA---TTC---TCG---ACAATG---CGGTGGATTGTGACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-GSASA-GI------------FWR-IMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------NQ------WLG-FIIGMAGWAYILYEI-----F--L-GEAGKMSAD--Q-APASV-K-S-A-F-S-TM-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-a]_KJ927994 [III-Alpha6-a] PRGD_OTU021a_ca7cebee1aca5e6d054884e9af3d2898 gb|KJ927994| PRGD_OTU021a_ca7cebee1aca5e6d054884e9af3d2898, putative proteorhodopsin gene, partial cds. PRGD_OTU021a_ca7cebee1aca5e6d054884e9af3d2898, putative proteorhodopsin gene, partial cds. KJ927994 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAATTACTGTACCCCTACTGATGGTTGAGTTCTATCTTATCCTGCGTGCAGTGGGTAGTGCTTCTGCAGGCATCTTCTGGCGCATCATGATAGGAACGTTGGTCATGCTAGTTGGCGGATATGCCGGCGAAGTCGGTTATATCAACCAGTGGCTTGGTTTCATCATTGGAATTGCTGGTTGGGCATACATTCTGTATGAAATCTTCCTCGGTGAAGCCGGCAAAATGTCTGCCGACCAGGCACCGGCTTCAGTTAAATCAGCATTCTCGACAATGCGGTGGATTGTGACCGTT LITVPLLMVEFYLILRAVGSASAGIFWRIMIGTLVMLVGGYAGEVGYINQWLGFIIGIAGWAYILYEIFLGEAGKMSADQAPASVKSAFSTMRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCCCTACTGATGGTTGAGTTCTATCTTATCCTGCGTGCA---------GTG---GGTAGTGCTTCTGCA---GGCATC------------------------------------TTCTGGCGC---ATCATGATAGGAACGTTGGTCATGCTAGTTGGCGGATATGCCGGCGAA---------GTC------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------AACCAG------------------TGGCTTGGT---TTCATCATTGGAATTGCTGGTTGGGCATACATTCTGTATGAAATC---------------TTC------CTC---GGTGAAGCCGGCAAAATGTCTGCCGAC------CAG---GCACCGGCTTCAGTT---AAA---TCA---GCA---TTC---TCG---ACAATG---CGGTGGATTGTGACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-GSASA-GI------------FWR-IMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------NQ------WLG-FIIGIAGWAYILYEI-----F--L-GEAGKMSAD--Q-APASV-K-S-A-F-S-TM-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-a]_KJ927991 [III-Alpha6-a] PRGD_OTU021a_93b7cb23926e24621ab01d5907f9f49a gb|KJ927991| PRGD_OTU021a_93b7cb23926e24621ab01d5907f9f49a, putative proteorhodopsin gene, partial cds. PRGD_OTU021a_93b7cb23926e24621ab01d5907f9f49a, putative proteorhodopsin gene, partial cds. KJ927991 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) TTGATTACTGTACCCCTATTGATGGTTGAGTTCTATCTTATCCTACGTGCAGTGGGCAGTGCTTCTGCAGGCATCTTCTGGCGCATCATGATAGGAACGTTGGTCATGCTAGTTGGCGGATATGCCGGCGAAGTCGGTTATATCGACCAGTGGCTTGGTTTCTTCATTGGAATGGCAGGTTGGGCATTCATTCTGTATGAAATCTTCCTCGGTGAAGCCGGCAAAATGTCTGCCGACCAGGCACCGGCTTCAGTTAAATCAGCATTCTCAACAATGCGGTGGATTGTGACCATT LITVPLLMVEFYLILRAVGSASAGIFWRIMIGTLVMLVGGYAGEVGYIDQWLGFFIGMAGWAFILYEIFLGEAGKMSADQAPASVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTACCCCTATTGATGGTTGAGTTCTATCTTATCCTACGTGCA---------GTG---GGCAGTGCTTCTGCA---GGCATC------------------------------------TTCTGGCGC---ATCATGATAGGAACGTTGGTCATGCTAGTTGGCGGATATGCCGGCGAA---------GTC------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------GACCAG------------------TGGCTTGGT---TTCTTCATTGGAATGGCAGGTTGGGCATTCATTCTGTATGAAATC---------------TTC------CTC---GGTGAAGCCGGCAAAATGTCTGCCGAC------CAG---GCACCGGCTTCAGTT---AAA---TCA---GCA---TTC---TCA---ACAATG---CGGTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-GSASA-GI------------FWR-IMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------DQ------WLG-FFIGMAGWAFILYEI-----F--L-GEAGKMSAD--Q-APASV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-a]_KJ927992 [III-Alpha6-a] PRGD_OTU021a_aca3f35baaeb27e71449cf39570d3145 gb|KJ927992| PRGD_OTU021a_aca3f35baaeb27e71449cf39570d3145, putative proteorhodopsin gene, partial cds. PRGD_OTU021a_aca3f35baaeb27e71449cf39570d3145, putative proteorhodopsin gene, partial cds. KJ927992 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) TTGATTACTGTACCCCTATTGATGGTTGAGTTCTATCTTATCCTACGTGCAGTGGGCAGTGCTTCTGCAGGCATCTTCTGGCGCATCATGATAGGAACGTTGGTCATGCTAGTTGGCGGATATGCCGGCGAAGTCGGTTATATCAACCAGTGGCTTGGTTTCATCATTGGAATGGCAGGTTGGGCATACATTCTGTATGAAATCTTCCTCGGTGAAGCCGGCAAAATGTCTGCCGACCAGGCACCGGCTTCAGTTAAATCAGCATTCTCAACAATGCGGTGGATTGTGACCGTT LITVPLLMVEFYLILRAVGSASAGIFWRIMIGTLVMLVGGYAGEVGYINQWLGFIIGMAGWAYILYEIFLGEAGKMSADQAPASVKSAFSTMRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTACCCCTATTGATGGTTGAGTTCTATCTTATCCTACGTGCA---------GTG---GGCAGTGCTTCTGCA---GGCATC------------------------------------TTCTGGCGC---ATCATGATAGGAACGTTGGTCATGCTAGTTGGCGGATATGCCGGCGAA---------GTC------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------AACCAG------------------TGGCTTGGT---TTCATCATTGGAATGGCAGGTTGGGCATACATTCTGTATGAAATC---------------TTC------CTC---GGTGAAGCCGGCAAAATGTCTGCCGAC------CAG---GCACCGGCTTCAGTT---AAA---TCA---GCA---TTC---TCA---ACAATG---CGGTGGATTGTGACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-GSASA-GI------------FWR-IMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------NQ------WLG-FIIGMAGWAYILYEI-----F--L-GEAGKMSAD--Q-APASV-K-S-A-F-S-TM-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-a]_KJ927976 [III-Alpha6-a] PRGD_OTU021a_1dc7e6dd6260b0d3c96398615f74b5cf gb|KJ927976| PRGD_OTU021a_1dc7e6dd6260b0d3c96398615f74b5cf, putative proteorhodopsin gene, partial cds. PRGD_OTU021a_1dc7e6dd6260b0d3c96398615f74b5cf, putative proteorhodopsin gene, partial cds. KJ927976 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683) TTGATTACTGTTCCTCTACTGATGGTTGAGTTCTATCTTATCCTGCGTGCAGTGGGCAGTGCTTCTGCAGGCATCTTCTGGCGCATCATGATAGGAACGTTGGTCATGCTAGTTGGCGGATATGCCGGCGAAGTCGGTTATATTAACCAGTGGCTTGGTTTCATCATTGGAATTGCTGGTTGGGCATACATCCTGTATGAAATCTTCCTCGGTGAAGCCGGCAAAATGTCTGCCGACCAGGCACCGGCTTCAGTTAAATCAGCATTCTCAACAATGCGGTGGATTGTGACCGTT LITVPLLMVEFYLILRAVGSASAGIFWRIMIGTLVMLVGGYAGEVGYINQWLGFIIGIAGWAYILYEIFLGEAGKMSADQAPASVKSAFSTMRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTTCCTCTACTGATGGTTGAGTTCTATCTTATCCTGCGTGCA---------GTG---GGCAGTGCTTCTGCA---GGCATC------------------------------------TTCTGGCGC---ATCATGATAGGAACGTTGGTCATGCTAGTTGGCGGATATGCCGGCGAA---------GTC------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------AACCAG------------------TGGCTTGGT---TTCATCATTGGAATTGCTGGTTGGGCATACATCCTGTATGAAATC---------------TTC------CTC---GGTGAAGCCGGCAAAATGTCTGCCGAC------CAG---GCACCGGCTTCAGTT---AAA---TCA---GCA---TTC---TCA---ACAATG---CGGTGGATTGTGACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-GSASA-GI------------FWR-IMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------NQ------WLG-FIIGIAGWAYILYEI-----F--L-GEAGKMSAD--Q-APASV-K-S-A-F-S-TM-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-a]_KJ927977 [III-Alpha6-a] PRGD_OTU021a_265c55cb902d2f136a877014c529399c gb|KJ927977| PRGD_OTU021a_265c55cb902d2f136a877014c529399c, putative proteorhodopsin gene, partial cds. PRGD_OTU021a_265c55cb902d2f136a877014c529399c, putative proteorhodopsin gene, partial cds. KJ927977 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTGATTACTGTTCCTCTACTGATGGTTGAGTTCTATCTTATCCTGCGTGCAGTGGGCAGTGCTTCTGCAGGCATCTTCTGGCGCATCATGATAGGAACGTTGGTCATGCTAGTTGGCGGATATGCCGGCGAAGTCGGTTATATTAACCAGTGGCTTGGTTTCATCATTGGAATGGCAGGTTGGGCATACATCCTGTATGAAATCTTCCTCGGTGAAGCCGGCAAAATGTCTGCCGACCAGGCACCGGCTTCAGTTAAATCAGCATTCTCAACAATGCGGTGGATTGTGACCGTT LITVPLLMVEFYLILRAVGSASAGIFWRIMIGTLVMLVGGYAGEVGYINQWLGFIIGMAGWAYILYEIFLGEAGKMSADQAPASVKSAFSTMRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTTCCTCTACTGATGGTTGAGTTCTATCTTATCCTGCGTGCA---------GTG---GGCAGTGCTTCTGCA---GGCATC------------------------------------TTCTGGCGC---ATCATGATAGGAACGTTGGTCATGCTAGTTGGCGGATATGCCGGCGAA---------GTC------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------AACCAG------------------TGGCTTGGT---TTCATCATTGGAATGGCAGGTTGGGCATACATCCTGTATGAAATC---------------TTC------CTC---GGTGAAGCCGGCAAAATGTCTGCCGAC------CAG---GCACCGGCTTCAGTT---AAA---TCA---GCA---TTC---TCA---ACAATG---CGGTGGATTGTGACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-GSASA-GI------------FWR-IMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------NQ------WLG-FIIGMAGWAYILYEI-----F--L-GEAGKMSAD--Q-APASV-K-S-A-F-S-TM-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-a]_KJ927970 [III-Alpha6-a] PRGD_OTU021a_otuREP_2c6b1945ac52c79b835d3a08e11d9239 gb|KJ927970| PRGD_OTU021a_otuREP_2c6b1945ac52c79b835d3a08e11d9239, putative proteorhodopsin gene, partial cds. PRGD_OTU021a_otuREP_2c6b1945ac52c79b835d3a08e11d9239, putative proteorhodopsin gene, partial cds. KJ927970 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTTATCACAGTTCCATTGTTGATGGTTGAGTTCTACTTGATCCTACGTGCCATTGGCAACGTATCAGGTGGCATCTTCTGGCGTCTAATGATCGGTACTTTGGTCATGCTCGTCGGTGGTTATGCTGGTGAAGTTGGTTACATCAACGCTTGGGTTGGTTTCATCATCGGTATGGCTGGTTGGGCATACATTCTGTATGAAATCTTTGCTGGTGAAGCTGGCAAGATGTCAGCAGAGAAGGCACCTGAGTCAGTGCGTTCAGCATTCTCAACAATGCGTTGGATTGTAACAATC LITVPLLMVEFYLILRAIGNVSGGIFWRLMIGTLVMLVGGYAGEVGYINAWVGFIIGMAGWAYILYEIFAGEAGKMSAEKAPESVRSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATCACAGTTCCATTGTTGATGGTTGAGTTCTACTTGATCCTACGTGCC---------ATT---GGCAACGTATCAGGT---GGCATC------------------------------------TTCTGGCGT---CTAATGATCGGTACTTTGGTCATGCTCGTCGGTGGTTATGCTGGTGAA---------GTT------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------TGGGTTGGT---TTCATCATCGGTATGGCTGGTTGGGCATACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCAAGATGTCAGCAGAG------AAG---GCACCTGAGTCAGTG---CGT---TCA---GCA---TTC---TCA---ACAATG---CGTTGGATTGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-GNVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------NA------WVG-FIIGMAGWAYILYEI-----F--A-GEAGKMSAE--K-APESV-R-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-a]_KJ927981 [III-Alpha6-a] PRGD_OTU021a_3b4d1af8fd8a57f11278974ed8711a82 gb|KJ927981| PRGD_OTU021a_3b4d1af8fd8a57f11278974ed8711a82, putative proteorhodopsin gene, partial cds. PRGD_OTU021a_3b4d1af8fd8a57f11278974ed8711a82, putative proteorhodopsin gene, partial cds. KJ927981 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Pacific side (72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683) CTTATCACAGTTCCATTGTTGATGGTTGAGTTCTACTTGATCCTACGTGCCATTGGCAACGTATCAGGTGGCATCTTCTGGCGTCTAATGATCGGTACTTTGGTCATGCTCGTCGGTGGTTATGCTGGTGAAGTTGGTTACATCAACGCGTGGTTTGGTTTCATCATCGGTATGGCAGGTTGGGCATACATTCTGTATGAAATCTTTGCTGGTGAAGCTGGCAAGATGTCAGCAGAGAAGGCACCTGAGTCAGTGCGTTCAGCATTCTCAACAATGCGTTGGATTGTAACAATC LITVPLLMVEFYLILRAIGNVSGGIFWRLMIGTLVMLVGGYAGEVGYINAWFGFIIGMAGWAYILYEIFAGEAGKMSAEKAPESVRSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATCACAGTTCCATTGTTGATGGTTGAGTTCTACTTGATCCTACGTGCC---------ATT---GGCAACGTATCAGGT---GGCATC------------------------------------TTCTGGCGT---CTAATGATCGGTACTTTGGTCATGCTCGTCGGTGGTTATGCTGGTGAA---------GTT------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGCG------------------TGGTTTGGT---TTCATCATCGGTATGGCAGGTTGGGCATACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCAAGATGTCAGCAGAG------AAG---GCACCTGAGTCAGTG---CGT---TCA---GCA---TTC---TCA---ACAATG---CGTTGGATTGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-GNVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------NA------WFG-FIIGMAGWAYILYEI-----F--A-GEAGKMSAE--K-APESV-R-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-a]_KJ927986 [III-Alpha6-a] PRGD_OTU021a_63e6ef15db5ee6c8dfa5c5f7ecf41eb5 gb|KJ927986| PRGD_OTU021a_63e6ef15db5ee6c8dfa5c5f7ecf41eb5, putative proteorhodopsin gene, partial cds. PRGD_OTU021a_63e6ef15db5ee6c8dfa5c5f7ecf41eb5, putative proteorhodopsin gene, partial cds. KJ927986 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) CTTATCACAGTTCCATTGTTGATGGTTGAGTTCTACCTGATCCTACGTGCCATTGGCAACGTGTCAGGTGGCATCTTCTGGCGTTTAATGATCGGTACTTTGGTTATGCTTGTCGGTGGTTATGCTGGTGAAGTTGGTTACATCAACGCTTGGGTTGGTTTTATCATTGGTATGGCTGGTTGGGCATACATTCTGTATGAAATCTTTGCTGGTGAAGCTGGCAAGATGTCAGCAGAGAAGGCACCTGAGTCAGTGCGTTCAGCATTCTCAACAATGCGTTGGATTGTAACAATC LITVPLLMVEFYLILRAIGNVSGGIFWRLMIGTLVMLVGGYAGEVGYINAWVGFIIGMAGWAYILYEIFAGEAGKMSAEKAPESVRSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATCACAGTTCCATTGTTGATGGTTGAGTTCTACCTGATCCTACGTGCC---------ATT---GGCAACGTGTCAGGT---GGCATC------------------------------------TTCTGGCGT---TTAATGATCGGTACTTTGGTTATGCTTGTCGGTGGTTATGCTGGTGAA---------GTT------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGCT------------------TGGGTTGGT---TTTATCATTGGTATGGCTGGTTGGGCATACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCAAGATGTCAGCAGAG------AAG---GCACCTGAGTCAGTG---CGT---TCA---GCA---TTC---TCA---ACAATG---CGTTGGATTGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-GNVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------NA------WVG-FIIGMAGWAYILYEI-----F--A-GEAGKMSAE--K-APESV-R-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-a]_KJ927979 [III-Alpha6-a] PRGD_OTU021a_2a530feff5bb1babb4a046dd88768e2f gb|KJ927979| PRGD_OTU021a_2a530feff5bb1babb4a046dd88768e2f, putative proteorhodopsin gene, partial cds. PRGD_OTU021a_2a530feff5bb1babb4a046dd88768e2f, putative proteorhodopsin gene, partial cds. KJ927979 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTAATCACAGTGCCGCTGTTGATGGTAGAATTCTACCTGATCCTTCGCGCCATTGGTAAAGTATCAGGTGGCATTTTCTGGCGTCTGATGATTGGTACATTGGTAATGCTCGTCGGTGGTTATGCTGGTGAGGCTGGTTACGTTAATCTGTGGCTTGCCTTTATCGTTGGTATGGCTGGTTGGGCATACATTCTGTATGAAATCTTTGCTGGTGAAGCTGGCAAAATGTCAGCAGAAAAGGCACCTGAGTCAGTCCGCTCTGCATTTTCAACAATGCGCTGGATTGTAACAATC LITVPLLMVEFYLILRAIGKVSGGIFWRLMIGTLVMLVGGYAGEAGYVNLWLAFIVGMAGWAYILYEIFAGEAGKMSAEKAPESVRSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACAGTGCCGCTGTTGATGGTAGAATTCTACCTGATCCTTCGCGCC---------ATT---GGTAAAGTATCAGGT---GGCATT------------------------------------TTCTGGCGT---CTGATGATTGGTACATTGGTAATGCTCGTCGGTGGTTATGCTGGTGAG---------GCT------------------GGT------TAC---------------------------------GTT------------------------------------------------------------------AATCTG------------------TGGCTTGCC---TTTATCGTTGGTATGGCTGGTTGGGCATACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCAAAATGTCAGCAGAA------AAG---GCACCTGAGTCAGTC---CGC---TCT---GCA---TTT---TCA---ACAATG---CGCTGGATTGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-GKVSG-GI------------FWR-LMIGTLVMLVGGYAGE---A------G--Y-----------V----------------------NL------WLA-FIVGMAGWAYILYEI-----F--A-GEAGKMSAE--K-APESV-R-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-MEDPR46A6]_KJ928244 [III-Alpha6-MEDPR46A6] PRGD_OTU029_2ece511f5bc737dc14ad73ca5045b411 gb|KJ928244| PRGD_OTU029_2ece511f5bc737dc14ad73ca5045b411, putative proteorhodopsin gene, partial cds. PRGD_OTU029_2ece511f5bc737dc14ad73ca5045b411, putative proteorhodopsin gene, partial cds. KJ928244 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/MEDPR46A6-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 MEDPR46A6-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.935, 18.508), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTCATCACTGTTCCGCTTCTGATGATCGAGTTCTACCTGATCCTGCGCGCTATCGCGAATGTCTCATCAGGCATTTTCTGGCGTCTGACGATCGGTACACTGATCATGTTGGTTGGCGGTTATGCGGGTGAAGCTGGCTACATGAACGTGTGGCTCGGGTTTGTCATCGGCATGGTCGGTTGGTTCTACATCCTGTACGAAATCTTCGCTGGTGAGGCCGGCAAGCTTTCGGCAGAGCAGGCACCAGAGTCGGTCAAGTCGGCGTTTTCCACCATGCGTTGGATTGTAACCATC LITVPLLMIEFYLILRAIANVSSGIFWRLTIGTLIMLVGGYAGEAGYMNVWLGFVIGMVGWFYILYEIFAGEAGKLSAEQAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACTGTTCCGCTTCTGATGATCGAGTTCTACCTGATCCTGCGCGCT---------ATC---GCGAATGTCTCATCA---GGCATT------------------------------------TTCTGGCGT---CTGACGATCGGTACACTGATCATGTTGGTTGGCGGTTATGCGGGTGAA---------GCT------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AACGTG------------------TGGCTCGGG---TTTGTCATCGGCATGGTCGGTTGGTTCTACATCCTGTACGAAATC---------------TTC------GCT---GGTGAGGCCGGCAAGCTTTCGGCAGAG------CAG---GCACCAGAGTCGGTC---AAG---TCG---GCG---TTT---TCC---ACCATG---CGTTGGATTGTAACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-ANVSS-GI------------FWR-LTIGTLIMLVGGYAGE---A------G--Y-----------M----------------------NV------WLG-FVIGMVGWFYILYEI-----F--A-GEAGKLSAE--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-MEDPR46A6]_KJ928263 [III-Alpha6-MEDPR46A6] PRGD_OTU029_bb5659dfa7966d81a9e1183cae229373 gb|KJ928263| PRGD_OTU029_bb5659dfa7966d81a9e1183cae229373, putative proteorhodopsin gene, partial cds. PRGD_OTU029_bb5659dfa7966d81a9e1183cae229373, putative proteorhodopsin gene, partial cds. KJ928263 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/MEDPR46A6-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 MEDPR46A6-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTCATCACTGTTCCGCTTCTGATGATCGAGTTCTACCTGATCCTGCGCGCTATCGCGAATGTCTCATCAGGCATTTTCTGGCGTCTGACGATCGGTACACTGATCATGTTGGTTGGCGGTTATGCGGGTGAAGCTGGCTACATGAACGTGTGGCTCGGGTTTGTCATCGGCATGGTCGGTTGGTTCTACATTCTGTACGAAATCTTCGCTGGTGAGGCCGGCAAGCTTTCGGCGGAGCAGGCACCAGAATCGGTCAAGTCGGCGTTTTCCACCATGCGTTGGATTGTAACCATC LITVPLLMIEFYLILRAIANVSSGIFWRLTIGTLIMLVGGYAGEAGYMNVWLGFVIGMVGWFYILYEIFAGEAGKLSAEQAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACTGTTCCGCTTCTGATGATCGAGTTCTACCTGATCCTGCGCGCT---------ATC---GCGAATGTCTCATCA---GGCATT------------------------------------TTCTGGCGT---CTGACGATCGGTACACTGATCATGTTGGTTGGCGGTTATGCGGGTGAA---------GCT------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AACGTG------------------TGGCTCGGG---TTTGTCATCGGCATGGTCGGTTGGTTCTACATTCTGTACGAAATC---------------TTC------GCT---GGTGAGGCCGGCAAGCTTTCGGCGGAG------CAG---GCACCAGAATCGGTC---AAG---TCG---GCG---TTT---TCC---ACCATG---CGTTGGATTGTAACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-ANVSS-GI------------FWR-LTIGTLIMLVGGYAGE---A------G--Y-----------M----------------------NV------WLG-FVIGMVGWFYILYEI-----F--A-GEAGKLSAE--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-MEDPR46A6]_KJ928248 [III-Alpha6-MEDPR46A6] PRGD_OTU029_465dcd1c998c04e573c755d1ac8cd12d gb|KJ928248| PRGD_OTU029_465dcd1c998c04e573c755d1ac8cd12d, putative proteorhodopsin gene, partial cds. PRGD_OTU029_465dcd1c998c04e573c755d1ac8cd12d, putative proteorhodopsin gene, partial cds. KJ928248 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/MEDPR46A6-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 MEDPR46A6-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTCATCACTGTTCCGCTTCTGATGATCGAGTTCTACCTGATCCTGCGCGCTATCGCGAATGTCTCATCAGGCATTTTCTGGCGTCTGACGATCGGTACACTGATCATGTTGGTTGGCGGTTATGCGGGTGAAGCTGGCTACATGAATGTGTGGCTCGGGTTTGTCATCGGCATGGTAGGTTGGTTCTACATCCTGTACGAAATCTTCGCTGGTGAGGCCGGCAAGCTTTCGGCAGAGCAGGCACCAGAGTCGGTCAAGTCGGCGTTTTCCACCATGCGTTGGATTGTAACCATC LITVPLLMIEFYLILRAIANVSSGIFWRLTIGTLIMLVGGYAGEAGYMNVWLGFVIGMVGWFYILYEIFAGEAGKLSAEQAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACTGTTCCGCTTCTGATGATCGAGTTCTACCTGATCCTGCGCGCT---------ATC---GCGAATGTCTCATCA---GGCATT------------------------------------TTCTGGCGT---CTGACGATCGGTACACTGATCATGTTGGTTGGCGGTTATGCGGGTGAA---------GCT------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AATGTG------------------TGGCTCGGG---TTTGTCATCGGCATGGTAGGTTGGTTCTACATCCTGTACGAAATC---------------TTC------GCT---GGTGAGGCCGGCAAGCTTTCGGCAGAG------CAG---GCACCAGAGTCGGTC---AAG---TCG---GCG---TTT---TCC---ACCATG---CGTTGGATTGTAACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-ANVSS-GI------------FWR-LTIGTLIMLVGGYAGE---A------G--Y-----------M----------------------NV------WLG-FVIGMVGWFYILYEI-----F--A-GEAGKLSAE--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-MEDPR46A6]_KJ928262 [III-Alpha6-MEDPR46A6] PRGD_OTU029_b1c776d7f3c74f6ae1d875a29ad3cb8c gb|KJ928262| PRGD_OTU029_b1c776d7f3c74f6ae1d875a29ad3cb8c, putative proteorhodopsin gene, partial cds. PRGD_OTU029_b1c776d7f3c74f6ae1d875a29ad3cb8c, putative proteorhodopsin gene, partial cds. KJ928262 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/MEDPR46A6-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 MEDPR46A6-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) CTGATCACCGTGCCACTTCTCATGATCGAGTTCTATCTGATCCTGCGCGCCATCGCGAATGTCTCATCGGGCATTTTCTGGCGTCTGACGATCGGTACGCTGATCATGCTGGTTGGCGGTTATGCGGGTGAAGCGGGCTACATGAATGTGTGGCTTGGTTTCGTCATCGGCATGGTCGGCTGGTTCTACATCCTGTACGAAATCTTCGCTGGTGAAGCCGGCAAGCTTTCGGCAGAGCAGGCACCAGAGTCGGTCAAGTCGGCATTTTCCACCATGCGTTGGATCGTAACCATC LITVPLLMIEFYLILRAIANVSSGIFWRLTIGTLIMLVGGYAGEAGYMNVWLGFVIGMVGWFYILYEIFAGEAGKLSAEQAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTGCCACTTCTCATGATCGAGTTCTATCTGATCCTGCGCGCC---------ATC---GCGAATGTCTCATCG---GGCATT------------------------------------TTCTGGCGT---CTGACGATCGGTACGCTGATCATGCTGGTTGGCGGTTATGCGGGTGAA---------GCG------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AATGTG------------------TGGCTTGGT---TTCGTCATCGGCATGGTCGGCTGGTTCTACATCCTGTACGAAATC---------------TTC------GCT---GGTGAAGCCGGCAAGCTTTCGGCAGAG------CAG---GCACCAGAGTCGGTC---AAG---TCG---GCA---TTT---TCC---ACCATG---CGTTGGATCGTAACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-ANVSS-GI------------FWR-LTIGTLIMLVGGYAGE---A------G--Y-----------M----------------------NV------WLG-FVIGMVGWFYILYEI-----F--A-GEAGKLSAE--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-MEDPR46A6]_KJ928265 [III-Alpha6-MEDPR46A6] PRGD_OTU029_f71a617ac8ff526e16d14cd82e73953c gb|KJ928265| PRGD_OTU029_f71a617ac8ff526e16d14cd82e73953c, putative proteorhodopsin gene, partial cds. PRGD_OTU029_f71a617ac8ff526e16d14cd82e73953c, putative proteorhodopsin gene, partial cds. KJ928265 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/MEDPR46A6-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 MEDPR46A6-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; ; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTTATCACTGTTCCGCTTCTCATGATCGAATTCTATCTGATCCTGCGCGCCATCGCGAATGTCTCTTCGGGCATTTTCTGGCGTCTGACGATCGGTACTCTGATCATGCTGGTCGGCGGTTATGCTGGTGAAGCAGGCTACATGAATGTGTGGCTTGGTTTCGTCATCGGCATGGTCGGTTGGTTCTACATCCTGTACGAAATCTTCGCTGGTGAAGCCGGCAAGCTTTCGGCAGAGCAGGCACCAGAGTCGGTCAAGTCGGCATTCTCCACCATGCGTTGGATCGTAACCATC LITVPLLMIEFYLILRAIANVSSGIFWRLTIGTLIMLVGGYAGEAGYMNVWLGFVIGMVGWFYILYEIFAGEAGKLSAEQAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATCACTGTTCCGCTTCTCATGATCGAATTCTATCTGATCCTGCGCGCC---------ATC---GCGAATGTCTCTTCG---GGCATT------------------------------------TTCTGGCGT---CTGACGATCGGTACTCTGATCATGCTGGTCGGCGGTTATGCTGGTGAA---------GCA------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AATGTG------------------TGGCTTGGT---TTCGTCATCGGCATGGTCGGTTGGTTCTACATCCTGTACGAAATC---------------TTC------GCT---GGTGAAGCCGGCAAGCTTTCGGCAGAG------CAG---GCACCAGAGTCGGTC---AAG---TCG---GCA---TTC---TCC---ACCATG---CGTTGGATCGTAACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-ANVSS-GI------------FWR-LTIGTLIMLVGGYAGE---A------G--Y-----------M----------------------NV------WLG-FVIGMVGWFYILYEI-----F--A-GEAGKLSAE--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-MEDPR46A6]_KJ928247 [III-Alpha6-MEDPR46A6] PRGD_OTU029_41dd26efd79012d844598bc5d6221e70 gb|KJ928247| PRGD_OTU029_41dd26efd79012d844598bc5d6221e70, putative proteorhodopsin gene, partial cds. PRGD_OTU029_41dd26efd79012d844598bc5d6221e70, putative proteorhodopsin gene, partial cds. KJ928247 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/MEDPR46A6-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 MEDPR46A6-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637; -33.9602, -73.3769), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTGATCACCGTTCCGCTCCTCATGATCGAATTCTACCTGATCCTGCGCGCCATCGCGAATGTCTCTTCTGGCATTTTCTGGCGTCTGACGATCGGTACCCTGATCATGCTGGTCGGTGGCTATGCTGGTGAAGCAGGTTACATGAACGTGTGGCTTGGTTTCGTCATCGGCATGGTTGGCTGGTTCTACATCCTGTACGAAATCTTTGCTGGTGAAGCCGGCAAGCTTTCGGCGGAGCAGGCACCAGAGTCAGTGAAGTCGGCATTCTCCACCATGCGTTGGATCGTAACCATC LITVPLLMIEFYLILRAIANVSSGIFWRLTIGTLIMLVGGYAGEAGYMNVWLGFVIGMVGWFYILYEIFAGEAGKLSAEQAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTTCCGCTCCTCATGATCGAATTCTACCTGATCCTGCGCGCC---------ATC---GCGAATGTCTCTTCT---GGCATT------------------------------------TTCTGGCGT---CTGACGATCGGTACCCTGATCATGCTGGTCGGTGGCTATGCTGGTGAA---------GCA------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACGTG------------------TGGCTTGGT---TTCGTCATCGGCATGGTTGGCTGGTTCTACATCCTGTACGAAATC---------------TTT------GCT---GGTGAAGCCGGCAAGCTTTCGGCGGAG------CAG---GCACCAGAGTCAGTG---AAG---TCG---GCA---TTC---TCC---ACCATG---CGTTGGATCGTAACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-ANVSS-GI------------FWR-LTIGTLIMLVGGYAGE---A------G--Y-----------M----------------------NV------WLG-FVIGMVGWFYILYEI-----F--A-GEAGKLSAE--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-MEDPR46A6]_KJ928250 [III-Alpha6-MEDPR46A6] PRGD_OTU029_4ccb3553407dfcde09a5fe5592edc1a5 gb|KJ928250| PRGD_OTU029_4ccb3553407dfcde09a5fe5592edc1a5, putative proteorhodopsin gene, partial cds. PRGD_OTU029_4ccb3553407dfcde09a5fe5592edc1a5, putative proteorhodopsin gene, partial cds. KJ928250 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/MEDPR46A6-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 MEDPR46A6-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -33.9602, -73.3769), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) CTGATCACCGTTCCGCTTCTCATGATCGAATTCTACCTGATCCTGCGCGCCATCGCGAATGTCTCTTCGGGCATTTTCTGGCGTCTGACGATCGGTACTCTGATCATGCTGGTCGGTGGCTATGCTGGTGAAGCAGGTTACATGAACGTGTGGCTTGGTTTCGTCATCGGCATGGTTGGCTGGTTCTACATCCTGTATGAAATCTTTGCTGGTGAAGCCGGCAAGCTTTCGGCGGAGCAGGCACCAGAGTCCGTGAAGTCGGCATTCTCCACCATGCGTTGGATCGTAACCATC LITVPLLMIEFYLILRAIANVSSGIFWRLTIGTLIMLVGGYAGEAGYMNVWLGFVIGMVGWFYILYEIFAGEAGKLSAEQAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTTCCGCTTCTCATGATCGAATTCTACCTGATCCTGCGCGCC---------ATC---GCGAATGTCTCTTCG---GGCATT------------------------------------TTCTGGCGT---CTGACGATCGGTACTCTGATCATGCTGGTCGGTGGCTATGCTGGTGAA---------GCA------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACGTG------------------TGGCTTGGT---TTCGTCATCGGCATGGTTGGCTGGTTCTACATCCTGTATGAAATC---------------TTT------GCT---GGTGAAGCCGGCAAGCTTTCGGCGGAG------CAG---GCACCAGAGTCCGTG---AAG---TCG---GCA---TTC---TCC---ACCATG---CGTTGGATCGTAACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-ANVSS-GI------------FWR-LTIGTLIMLVGGYAGE---A------G--Y-----------M----------------------NV------WLG-FVIGMVGWFYILYEI-----F--A-GEAGKLSAE--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-MEDPR46A6]_KJ928259 [III-Alpha6-MEDPR46A6] PRGD_OTU029_9b09468fda36fa33203394abc4dc77eb gb|KJ928259| PRGD_OTU029_9b09468fda36fa33203394abc4dc77eb, putative proteorhodopsin gene, partial cds. PRGD_OTU029_9b09468fda36fa33203394abc4dc77eb, putative proteorhodopsin gene, partial cds. KJ928259 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/MEDPR46A6-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 MEDPR46A6-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTGATCACCGTCCCGCTTCTCATGATCGAATTCTACCTGATCCTGCGCGCCATTGCGAATGTCTCTTCGGGCATTTTCTGGCGTCTGACGATCGGTACTCTGATCATGCTGGTCGGTGGTTATGCTGGTGAAGCAGGTTACATGAACGTGTGGCTTGGTTTCGTCATCGGCATGGTTGGCTGGTTCTACATCCTGTACGAAATCTTTGCTGGTGAAGCCGGCAAGCTTTCGGCGGAGCAGGCACCAGAGTCCGTGAAGTCGGCATTCTCCACCATGCGTTGGATCGTAACCATC LITVPLLMIEFYLILRAIANVSSGIFWRLTIGTLIMLVGGYAGEAGYMNVWLGFVIGMVGWFYILYEIFAGEAGKLSAEQAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTCCCGCTTCTCATGATCGAATTCTACCTGATCCTGCGCGCC---------ATT---GCGAATGTCTCTTCG---GGCATT------------------------------------TTCTGGCGT---CTGACGATCGGTACTCTGATCATGCTGGTCGGTGGTTATGCTGGTGAA---------GCA------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACGTG------------------TGGCTTGGT---TTCGTCATCGGCATGGTTGGCTGGTTCTACATCCTGTACGAAATC---------------TTT------GCT---GGTGAAGCCGGCAAGCTTTCGGCGGAG------CAG---GCACCAGAGTCCGTG---AAG---TCG---GCA---TTC---TCC---ACCATG---CGTTGGATCGTAACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-ANVSS-GI------------FWR-LTIGTLIMLVGGYAGE---A------G--Y-----------M----------------------NV------WLG-FVIGMVGWFYILYEI-----F--A-GEAGKLSAE--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-MEDPR46A6]_KJ928249 [III-Alpha6-MEDPR46A6] PRGD_OTU029_4b296f43057a9447c9688d8c497d528c gb|KJ928249| PRGD_OTU029_4b296f43057a9447c9688d8c497d528c, putative proteorhodopsin gene, partial cds. PRGD_OTU029_4b296f43057a9447c9688d8c497d528c, putative proteorhodopsin gene, partial cds. KJ928249 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/MEDPR46A6-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 MEDPR46A6-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Pacific side (70.9139, -128.9264), Mediterranean Sea (33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) CTGATCACCGTTCCGCTTCTCATGATTGAATTCTACCTGATCCTGCGCGCCATCGCGAATGTCTCTTCGGGCATTTTCTGGCGTCTGACGATCGGTACTCTGATCATGCTGGTCGGCGGTTACGCTGGTGAAGCAGGCTACATGAACGTATGGCTTGGTTTCGTCATCGGTATGGTTGGCTGGTTCTACATCCTGTACGAAATCTTCGCTGGTGAAGCCGGCAAGCTTTCGGCGGAGCAGGCACCAGAGTCCGTCAAGTCGGCATTCTCCACCATGCGTTGGATCGTAACCATT LITVPLLMIEFYLILRAIANVSSGIFWRLTIGTLIMLVGGYAGEAGYMNVWLGFVIGMVGWFYILYEIFAGEAGKLSAEQAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTTCCGCTTCTCATGATTGAATTCTACCTGATCCTGCGCGCC---------ATC---GCGAATGTCTCTTCG---GGCATT------------------------------------TTCTGGCGT---CTGACGATCGGTACTCTGATCATGCTGGTCGGCGGTTACGCTGGTGAA---------GCA------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AACGTA------------------TGGCTTGGT---TTCGTCATCGGTATGGTTGGCTGGTTCTACATCCTGTACGAAATC---------------TTC------GCT---GGTGAAGCCGGCAAGCTTTCGGCGGAG------CAG---GCACCAGAGTCCGTC---AAG---TCG---GCA---TTC---TCC---ACCATG---CGTTGGATCGTAACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-ANVSS-GI------------FWR-LTIGTLIMLVGGYAGE---A------G--Y-----------M----------------------NV------WLG-FVIGMVGWFYILYEI-----F--A-GEAGKLSAE--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-MEDPR46A6]_KJ928253 [III-Alpha6-MEDPR46A6] PRGD_OTU029_52305a41be7ec7fe429822dccea7ea40 gb|KJ928253| PRGD_OTU029_52305a41be7ec7fe429822dccea7ea40, putative proteorhodopsin gene, partial cds. PRGD_OTU029_52305a41be7ec7fe429822dccea7ea40, putative proteorhodopsin gene, partial cds. KJ928253 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/MEDPR46A6-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 MEDPR46A6-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.935 18.508 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTCATCACCGTGCCGCTTCTCATGATCGAATTCTATCTGATCCTGCGCGCCATCGCGAATGTCTCTTCGGGCATTTTCTGGCGTCTGACGATCGGTACTCTGATCATGCTGGTCGGCGGTTATGCTGGTGAAGCAGGCTACATGAATGTGTGGCTCGGTTTCGTCATCGGCATGGTCGGTTGGTTCTACATCCTGTACGAAATCTTCGCTGGTGAAGCCGGCAAGCTTTCGGCAGAGCAGGCACCAGAGTCGGTCAAGTCGGCTTTCTCCACCATGCGTTGGATCGTAACCATC LITVPLLMIEFYLILRAIANVSSGIFWRLTIGTLIMLVGGYAGEAGYMNVWLGFVIGMVGWFYILYEIFAGEAGKLSAEQAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACCGTGCCGCTTCTCATGATCGAATTCTATCTGATCCTGCGCGCC---------ATC---GCGAATGTCTCTTCG---GGCATT------------------------------------TTCTGGCGT---CTGACGATCGGTACTCTGATCATGCTGGTCGGCGGTTATGCTGGTGAA---------GCA------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AATGTG------------------TGGCTCGGT---TTCGTCATCGGCATGGTCGGTTGGTTCTACATCCTGTACGAAATC---------------TTC------GCT---GGTGAAGCCGGCAAGCTTTCGGCAGAG------CAG---GCACCAGAGTCGGTC---AAG---TCG---GCT---TTC---TCC---ACCATG---CGTTGGATCGTAACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-ANVSS-GI------------FWR-LTIGTLIMLVGGYAGE---A------G--Y-----------M----------------------NV------WLG-FVIGMVGWFYILYEI-----F--A-GEAGKLSAE--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-MEDPR46A6]_KJ928238 [III-Alpha6-MEDPR46A6] PRGD_OTU029_otuREP_20165c600151058a60027da1a82d1208 gb|KJ928238| PRGD_OTU029_otuREP_20165c600151058a60027da1a82d1208, putative proteorhodopsin gene, partial cds. PRGD_OTU029_otuREP_20165c600151058a60027da1a82d1208, putative proteorhodopsin gene, partial cds. KJ928238 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/MEDPR46A6-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 MEDPR46A6-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTGATCACTGTTCCGCTTCTCATGATCGAGTTCTATCTGATCCTGCGCGCCATTGCCAACGTCTCGTCTGGCATTTTCTGGCGTCTGACGGTCGGTACTCTGATCATGCTTGTCGGCGGTTACGCCGGCGAAGTGGGCTACATGAATGTGTGGCTCGGCTTTGTAATCGGTATGGCCGGTTGGTTCTACATCCTGTACGAGATCTTTGCTGGTGAAGCCGGCAAGCTTTCTGCAGAGCAGGCACCAGAGTCGGTCAAGTCGGCATTCTCCACCATGCGTTGGATTGTAACCATC LITVPLLMIEFYLILRAIANVSSGIFWRLTVGTLIMLVGGYAGEVGYMNVWLGFVIGMAGWFYILYEIFAGEAGKLSAEQAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTTCCGCTTCTCATGATCGAGTTCTATCTGATCCTGCGCGCC---------ATT---GCCAACGTCTCGTCT---GGCATT------------------------------------TTCTGGCGT---CTGACGGTCGGTACTCTGATCATGCTTGTCGGCGGTTACGCCGGCGAA---------GTG------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AATGTG------------------TGGCTCGGC---TTTGTAATCGGTATGGCCGGTTGGTTCTACATCCTGTACGAGATC---------------TTT------GCT---GGTGAAGCCGGCAAGCTTTCTGCAGAG------CAG---GCACCAGAGTCGGTC---AAG---TCG---GCA---TTC---TCC---ACCATG---CGTTGGATTGTAACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-ANVSS-GI------------FWR-LTVGTLIMLVGGYAGE---V------G--Y-----------M----------------------NV------WLG-FVIGMAGWFYILYEI-----F--A-GEAGKLSAE--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-MEDPR46A6]_KJ928245 [III-Alpha6-MEDPR46A6] PRGD_OTU029_33e8ed7515747e43d73ee750b1bebb22 gb|KJ928245| PRGD_OTU029_33e8ed7515747e43d73ee750b1bebb22, putative proteorhodopsin gene, partial cds. PRGD_OTU029_33e8ed7515747e43d73ee750b1bebb22, putative proteorhodopsin gene, partial cds. KJ928245 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/MEDPR46A6-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 MEDPR46A6-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.935 18.508 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTGATCACTGTTCCGCTTCTCATGATCGAGTTCTATCTGATCCTGCGCGCCATCGCCAACGTTTCGTCTGGCATTTTCTGGCGTCTGACGGTCGGTACTCTGATCATGCTTGTCGGCGGTTACGCCGGTGAAGTGGGCTACATGAATGTGTGGCTCGGCTTTGTAATCGGCATGGCCGGTTGGTTCTACATCCTGTACGAGATCTTTGCTGGTGAAGCCGGCAAGCTTTCTGCAGAGCAGGCACCAGAGTCGGTCAAGTCGGCATTCTCCACCATGCGTTGGATTGTAACCATC LITVPLLMIEFYLILRAIANVSSGIFWRLTVGTLIMLVGGYAGEVGYMNVWLGFVIGMAGWFYILYEIFAGEAGKLSAEQAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTTCCGCTTCTCATGATCGAGTTCTATCTGATCCTGCGCGCC---------ATC---GCCAACGTTTCGTCT---GGCATT------------------------------------TTCTGGCGT---CTGACGGTCGGTACTCTGATCATGCTTGTCGGCGGTTACGCCGGTGAA---------GTG------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AATGTG------------------TGGCTCGGC---TTTGTAATCGGCATGGCCGGTTGGTTCTACATCCTGTACGAGATC---------------TTT------GCT---GGTGAAGCCGGCAAGCTTTCTGCAGAG------CAG---GCACCAGAGTCGGTC---AAG---TCG---GCA---TTC---TCC---ACCATG---CGTTGGATTGTAACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-ANVSS-GI------------FWR-LTVGTLIMLVGGYAGE---V------G--Y-----------M----------------------NV------WLG-FVIGMAGWFYILYEI-----F--A-GEAGKLSAE--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-MEDPR46A6]_KJ928243 [III-Alpha6-MEDPR46A6] PRGD_OTU029_21c29b51f6b0e63d60b136734486b725 gb|KJ928243| PRGD_OTU029_21c29b51f6b0e63d60b136734486b725, putative proteorhodopsin gene, partial cds. PRGD_OTU029_21c29b51f6b0e63d60b136734486b725, putative proteorhodopsin gene, partial cds. KJ928243 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/MEDPR46A6-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 MEDPR46A6-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTCATCACTGTTCCGCTTCTCATGATCGAATTCTATCTGATCCTGCGCGCGATCGCCAACGTATCGTCTGGCATCTTCTGGCGCCTGACAGTTGGTACACTGATCATGCTGGTCGGCGGTTATGCCGGTGAAGTTGGCTACATGAATGTGTGGCTCGGCTTTGTCATCGGTATGGCTGGTTGGTTCTACATCCTGTACGAAATCTTTGCTGGTGAAGCCGGCAAGCTTTCCGCAGAGCAGGCACCAGAGTCGGTCAAGTCGGCCTTCTCCACCATGCGCTGGATTGTAACCATC LITVPLLMIEFYLILRAIANVSSGIFWRLTVGTLIMLVGGYAGEVGYMNVWLGFVIGMAGWFYILYEIFAGEAGKLSAEQAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACTGTTCCGCTTCTCATGATCGAATTCTATCTGATCCTGCGCGCG---------ATC---GCCAACGTATCGTCT---GGCATC------------------------------------TTCTGGCGC---CTGACAGTTGGTACACTGATCATGCTGGTCGGCGGTTATGCCGGTGAA---------GTT------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AATGTG------------------TGGCTCGGC---TTTGTCATCGGTATGGCTGGTTGGTTCTACATCCTGTACGAAATC---------------TTT------GCT---GGTGAAGCCGGCAAGCTTTCCGCAGAG------CAG---GCACCAGAGTCGGTC---AAG---TCG---GCC---TTC---TCC---ACCATG---CGCTGGATTGTAACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-ANVSS-GI------------FWR-LTVGTLIMLVGGYAGE---V------G--Y-----------M----------------------NV------WLG-FVIGMAGWFYILYEI-----F--A-GEAGKLSAE--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-MEDPR46A6]_KJ928254 [III-Alpha6-MEDPR46A6] PRGD_OTU029_5523f43de8f8b75b956d7c309f327072 gb|KJ928254| PRGD_OTU029_5523f43de8f8b75b956d7c309f327072, putative proteorhodopsin gene, partial cds. PRGD_OTU029_5523f43de8f8b75b956d7c309f327072, putative proteorhodopsin gene, partial cds. KJ928254 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/MEDPR46A6-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 MEDPR46A6-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), English Channel (48.7717, -3.9683) CTCATCACTGTTCCGCTTCTCATGATCGAATTCTATCTGATCCTGCGCGCGATCGCCAACGTATCGTCTGGCATCTTCTGGCGTCTGACAGTTGGTACACTGATCATGCTGGTCGGCGGTTATGCCGGCGAAGTTGGCTACATGAATGTGTGGCTCGGCTTTGTCATCGGTATGGCTGGTTGGTTCTACATCCTGTACGAAATCTTTGCTGGTGAAGCCGGCAAGCTTTCCGCAGAGCAGGCACCAGAGTCGGTCAAGTCGGCCTTCTCCACCATGCGCTGGATTGTAACCATC LITVPLLMIEFYLILRAIANVSSGIFWRLTVGTLIMLVGGYAGEVGYMNVWLGFVIGMAGWFYILYEIFAGEAGKLSAEQAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACTGTTCCGCTTCTCATGATCGAATTCTATCTGATCCTGCGCGCG---------ATC---GCCAACGTATCGTCT---GGCATC------------------------------------TTCTGGCGT---CTGACAGTTGGTACACTGATCATGCTGGTCGGCGGTTATGCCGGCGAA---------GTT------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AATGTG------------------TGGCTCGGC---TTTGTCATCGGTATGGCTGGTTGGTTCTACATCCTGTACGAAATC---------------TTT------GCT---GGTGAAGCCGGCAAGCTTTCCGCAGAG------CAG---GCACCAGAGTCGGTC---AAG---TCG---GCC---TTC---TCC---ACCATG---CGCTGGATTGTAACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-ANVSS-GI------------FWR-LTVGTLIMLVGGYAGE---V------G--Y-----------M----------------------NV------WLG-FVIGMAGWFYILYEI-----F--A-GEAGKLSAE--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-MEDPR46A6]_KJ928252 [III-Alpha6-MEDPR46A6] PRGD_OTU029_4e5727b588209a6323c6146073320a4a gb|KJ928252| PRGD_OTU029_4e5727b588209a6323c6146073320a4a, putative proteorhodopsin gene, partial cds. PRGD_OTU029_4e5727b588209a6323c6146073320a4a, putative proteorhodopsin gene, partial cds. KJ928252 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/MEDPR46A6-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 MEDPR46A6-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) CTCATCACTGTTCCGCTTCTGATGATCGAGTTCTACCTGATCCTGCGCGCGATCGCCAACGTATCGTCTGGCATCTTCTGGCGCCTGACAGTAGGTACGCTCATCATGCTGGTCGGTGGTTATGCCGGCGAGGTTGGCTACATGAATGCGTGGCTCGGCTTTGTCATCGGTATGGCCGGTTGGTTCTACATTCTGTACGAGATCTTCGCTGGTGAAGCCGGCAAGCTCTCCGCAGAGCAGGCACCTGAGTCGGTCAAGTCGGCCTTCTCGACCATGCGCTGGATTGTAACCATC LITVPLLMIEFYLILRAIANVSSGIFWRLTVGTLIMLVGGYAGEVGYMNAWLGFVIGMAGWFYILYEIFAGEAGKLSAEQAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACTGTTCCGCTTCTGATGATCGAGTTCTACCTGATCCTGCGCGCG---------ATC---GCCAACGTATCGTCT---GGCATC------------------------------------TTCTGGCGC---CTGACAGTAGGTACGCTCATCATGCTGGTCGGTGGTTATGCCGGCGAG---------GTT------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AATGCG------------------TGGCTCGGC---TTTGTCATCGGTATGGCCGGTTGGTTCTACATTCTGTACGAGATC---------------TTC------GCT---GGTGAAGCCGGCAAGCTCTCCGCAGAG------CAG---GCACCTGAGTCGGTC---AAG---TCG---GCC---TTC---TCG---ACCATG---CGCTGGATTGTAACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-ANVSS-GI------------FWR-LTVGTLIMLVGGYAGE---V------G--Y-----------M----------------------NA------WLG-FVIGMAGWFYILYEI-----F--A-GEAGKLSAE--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-MEDPR46A6]_KJ928264 [III-Alpha6-MEDPR46A6] PRGD_OTU029_c2aacfc3a500584834cb7dd96658c7e2 gb|KJ928264| PRGD_OTU029_c2aacfc3a500584834cb7dd96658c7e2, putative proteorhodopsin gene, partial cds. PRGD_OTU029_c2aacfc3a500584834cb7dd96658c7e2, putative proteorhodopsin gene, partial cds. KJ928264 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/MEDPR46A6-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 MEDPR46A6-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175; 33.935, 18.508), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTCATCACTGTTCCGCTTCTGATGATCGAGTTCTACCTGATCCTGCGCGCGATCGCCAACGTATCGTCTGGCATCTTCTGGCGCCTGACCGTAGGTACGCTCATCATGCTGGTCGGTGGTTATGCCGGCGAGGTTGGCTACATGAACGTGTGGCTCGGCTTTGTCATCGGTATGGCCGGTTGGTTCTACATCCTGTACGAGATCTTCGCTGGTGAAGCCGGCAAGCTCTCCGCAGAGCAGGCGCCCGAGTCGGTCAAGTCGGCCTTCTCGACCATGCGCTGGATTGTAACCATC LITVPLLMIEFYLILRAIANVSSGIFWRLTVGTLIMLVGGYAGEVGYMNVWLGFVIGMAGWFYILYEIFAGEAGKLSAEQAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACTGTTCCGCTTCTGATGATCGAGTTCTACCTGATCCTGCGCGCG---------ATC---GCCAACGTATCGTCT---GGCATC------------------------------------TTCTGGCGC---CTGACCGTAGGTACGCTCATCATGCTGGTCGGTGGTTATGCCGGCGAG---------GTT------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AACGTG------------------TGGCTCGGC---TTTGTCATCGGTATGGCCGGTTGGTTCTACATCCTGTACGAGATC---------------TTC------GCT---GGTGAAGCCGGCAAGCTCTCCGCAGAG------CAG---GCGCCCGAGTCGGTC---AAG---TCG---GCC---TTC---TCG---ACCATG---CGCTGGATTGTAACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-ANVSS-GI------------FWR-LTVGTLIMLVGGYAGE---V------G--Y-----------M----------------------NV------WLG-FVIGMAGWFYILYEI-----F--A-GEAGKLSAE--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-MEDPR46A6]_KJ928258 [III-Alpha6-MEDPR46A6] PRGD_OTU029_8c04d615a25a56d3c0523cf19e3dd4fe gb|KJ928258| PRGD_OTU029_8c04d615a25a56d3c0523cf19e3dd4fe, putative proteorhodopsin gene, partial cds. PRGD_OTU029_8c04d615a25a56d3c0523cf19e3dd4fe, putative proteorhodopsin gene, partial cds. KJ928258 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/MEDPR46A6-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 MEDPR46A6-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -33.9602, -73.3769), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTCATCACAGTTCCGCTGCTGATGATTGAATTCTATCTGATCCTGCGCGCCATCGCGAACGTGTCATCAGGCATTTTCTGGCGTCTCACCATCGGTTCACTCATCATGCTGGTGGGTGGTTACGCTGGTGAAGTTGGTTATGTGAATGCATGGCTCGGCTTTGTGATTGGTATGGCAGGCTGGTTCTACATCCTGTACGAAATCTTTGCTGGCGAAGCCGGCAAGCTTTCTGCAGAGCAGGCTCCTGAGTCAGTCAAGTCAGCTTTCTCGACCATGCGCTGGATTGTAACCATT LITVPLLMIEFYLILRAIANVSSGIFWRLTIGSLIMLVGGYAGEVGYVNAWLGFVIGMAGWFYILYEIFAGEAGKLSAEQAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTTCCGCTGCTGATGATTGAATTCTATCTGATCCTGCGCGCC---------ATC---GCGAACGTGTCATCA---GGCATT------------------------------------TTCTGGCGT---CTCACCATCGGTTCACTCATCATGCTGGTGGGTGGTTACGCTGGTGAA---------GTT------------------GGT------TAT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTGATTGGTATGGCAGGCTGGTTCTACATCCTGTACGAAATC---------------TTT------GCT---GGCGAAGCCGGCAAGCTTTCTGCAGAG------CAG---GCTCCTGAGTCAGTC---AAG---TCA---GCT---TTC---TCG---ACCATG---CGCTGGATTGTAACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-ANVSS-GI------------FWR-LTIGSLIMLVGGYAGE---V------G--Y-----------V----------------------NA------WLG-FVIGMAGWFYILYEI-----F--A-GEAGKLSAE--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-MEDPR46A6]_KJ928255 [III-Alpha6-MEDPR46A6] PRGD_OTU029_69b5e774d671d2345935a8782435b99e gb|KJ928255| PRGD_OTU029_69b5e774d671d2345935a8782435b99e, putative proteorhodopsin gene, partial cds. PRGD_OTU029_69b5e774d671d2345935a8782435b99e, putative proteorhodopsin gene, partial cds. KJ928255 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/MEDPR46A6-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 MEDPR46A6-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCATCACAGTTCCGCTGCTGATGATCGAATTCTATCTGATCCTGCGCGCCATCGCGAACGTGTCATCAGGCATTTTCTGGCGTCTCACCATCGGTTCACTCATCATGCTGGTGGGTGGTTACGCTGGTGAAGTTGGTTATGTGAATGCATGGCTCGGCTTTGTGATTGGTATGGCAGGCTGGTTCTATATTCTGTACGAAATCTTTGCTGGTGAAGCCGGCAAGCTTTCTGCAGAGCAGGCCCCTGAGTCGGTCAAGTCAGCTTTCTCGACAATGCGCTGGATTGTGACCATT LITVPLLMIEFYLILRAIANVSSGIFWRLTIGSLIMLVGGYAGEVGYVNAWLGFVIGMAGWFYILYEIFAGEAGKLSAEQAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTTCCGCTGCTGATGATCGAATTCTATCTGATCCTGCGCGCC---------ATC---GCGAACGTGTCATCA---GGCATT------------------------------------TTCTGGCGT---CTCACCATCGGTTCACTCATCATGCTGGTGGGTGGTTACGCTGGTGAA---------GTT------------------GGT------TAT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTGATTGGTATGGCAGGCTGGTTCTATATTCTGTACGAAATC---------------TTT------GCT---GGTGAAGCCGGCAAGCTTTCTGCAGAG------CAG---GCCCCTGAGTCGGTC---AAG---TCA---GCT---TTC---TCG---ACAATG---CGCTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-ANVSS-GI------------FWR-LTIGSLIMLVGGYAGE---V------G--Y-----------V----------------------NA------WLG-FVIGMAGWFYILYEI-----F--A-GEAGKLSAE--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-MEDPR46A6]_KJ928246 [III-Alpha6-MEDPR46A6] PRGD_OTU029_3680fb3661d8477d4a65ef4bfd8ff7c4 gb|KJ928246| PRGD_OTU029_3680fb3661d8477d4a65ef4bfd8ff7c4, putative proteorhodopsin gene, partial cds. PRGD_OTU029_3680fb3661d8477d4a65ef4bfd8ff7c4, putative proteorhodopsin gene, partial cds. KJ928246 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/MEDPR46A6-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 MEDPR46A6-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCATCACAGTTCCGCTGCTGATGATCGAATTCTATCTGATCCTGCGCGCCATCGCGAATGTGTCATCAGGCATTTTCTGGCGTCTCACCATCGGTTCACTCATCATGCTGGTGGGTGGTTACGCTGGTGAAGTTGGTTATGTGAATGCATGGCTCGGCTTTGTGATTGGTATGGCAGGCTGGTTCTATATCCTCTATGAAATCTTTGCTGGTGAAGCAGGCAAGCTTTCTGCAGAGCAGGCCCCTGAGTCGGTCAAGTCAGCTTTCTCGACCATGCGCTGGATTGTAACCATT LITVPLLMIEFYLILRAIANVSSGIFWRLTIGSLIMLVGGYAGEVGYVNAWLGFVIGMAGWFYILYEIFAGEAGKLSAEQAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTTCCGCTGCTGATGATCGAATTCTATCTGATCCTGCGCGCC---------ATC---GCGAATGTGTCATCA---GGCATT------------------------------------TTCTGGCGT---CTCACCATCGGTTCACTCATCATGCTGGTGGGTGGTTACGCTGGTGAA---------GTT------------------GGT------TAT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTGATTGGTATGGCAGGCTGGTTCTATATCCTCTATGAAATC---------------TTT------GCT---GGTGAAGCAGGCAAGCTTTCTGCAGAG------CAG---GCCCCTGAGTCGGTC---AAG---TCA---GCT---TTC---TCG---ACCATG---CGCTGGATTGTAACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-ANVSS-GI------------FWR-LTIGSLIMLVGGYAGE---V------G--Y-----------V----------------------NA------WLG-FVIGMAGWFYILYEI-----F--A-GEAGKLSAE--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-MEDPR46A6]_KJ928251 [III-Alpha6-MEDPR46A6] PRGD_OTU029_4d7f3a24805c53d8d49c6b26f58fe7b6 gb|KJ928251| PRGD_OTU029_4d7f3a24805c53d8d49c6b26f58fe7b6, putative proteorhodopsin gene, partial cds. PRGD_OTU029_4d7f3a24805c53d8d49c6b26f58fe7b6, putative proteorhodopsin gene, partial cds. KJ928251 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/MEDPR46A6-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 MEDPR46A6-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTCATCACAGTTCCACTGCTGATGATCGAATTCTACCTGATCCTGCGCGCCATTGCGAACGTGTCGTCTGGCATTTTCTGGCGTCTCACCATCGGTTCACTCATCATGCTGGTGGGTGGTTACGCTGGTGAGGTTGGCTATGTAAATGCATGGCTCGGCTTTGTGATCGGTATGGCAGGCTGGTTCTACATCCTGTATGAAATCTTTGCTGGTGAAGCTGGCAAGCTTTCTGCAGAGCAAGCCCCTGAATCAGTCAAGTCGGCTTTCTCAACCATGCGCTGGATTGTGACCATT LITVPLLMIEFYLILRAIANVSSGIFWRLTIGSLIMLVGGYAGEVGYVNAWLGFVIGMAGWFYILYEIFAGEAGKLSAEQAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTTCCACTGCTGATGATCGAATTCTACCTGATCCTGCGCGCC---------ATT---GCGAACGTGTCGTCT---GGCATT------------------------------------TTCTGGCGT---CTCACCATCGGTTCACTCATCATGCTGGTGGGTGGTTACGCTGGTGAG---------GTT------------------GGC------TAT---------------------------------GTA------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTGATCGGTATGGCAGGCTGGTTCTACATCCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCAAGCTTTCTGCAGAG------CAA---GCCCCTGAATCAGTC---AAG---TCG---GCT---TTC---TCA---ACCATG---CGCTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-ANVSS-GI------------FWR-LTIGSLIMLVGGYAGE---V------G--Y-----------V----------------------NA------WLG-FVIGMAGWFYILYEI-----F--A-GEAGKLSAE--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-MEDPR46A6]_KJ928256 [III-Alpha6-MEDPR46A6] PRGD_OTU029_709768494bb7a67f33aefea3520c3e73 gb|KJ928256| PRGD_OTU029_709768494bb7a67f33aefea3520c3e73, putative proteorhodopsin gene, partial cds. PRGD_OTU029_709768494bb7a67f33aefea3520c3e73, putative proteorhodopsin gene, partial cds. KJ928256 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/MEDPR46A6-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 MEDPR46A6-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTCATCACAGTTCCGCTGCTGATGATTGAATTCTATCTGATCCTGCGCGCCATCGCGAACGTGTCATCAGGCATTTTCTGGCGTCTCACCATCGGTTCACTCATCATGCTGGTGGGTGGTTACGCTGGTGAGGTTGGCTATGTAAATGCATGGCTCGGCTTTGTGATCGGTATGGCAGGCTGGTTCTACATCCTGTATGAAATCTTTGCTGGTGAAGCTGGCAAGCTTTCTGCAGAGCAAGCCCCTGAATCAGTCAAGTCGGCTTTCTCAACCATGCGCTGGATTGTGACCATT LITVPLLMIEFYLILRAIANVSSGIFWRLTIGSLIMLVGGYAGEVGYVNAWLGFVIGMAGWFYILYEIFAGEAGKLSAEQAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTTCCGCTGCTGATGATTGAATTCTATCTGATCCTGCGCGCC---------ATC---GCGAACGTGTCATCA---GGCATT------------------------------------TTCTGGCGT---CTCACCATCGGTTCACTCATCATGCTGGTGGGTGGTTACGCTGGTGAG---------GTT------------------GGC------TAT---------------------------------GTA------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTGATCGGTATGGCAGGCTGGTTCTACATCCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCAAGCTTTCTGCAGAG------CAA---GCCCCTGAATCAGTC---AAG---TCG---GCT---TTC---TCA---ACCATG---CGCTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-ANVSS-GI------------FWR-LTIGSLIMLVGGYAGE---V------G--Y-----------V----------------------NA------WLG-FVIGMAGWFYILYEI-----F--A-GEAGKLSAE--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-MEDPR46A6]_KJ928239 [III-Alpha6-MEDPR46A6] PRGD_OTU029_04fb20ed94a538e4fc015531004d292e gb|KJ928239| PRGD_OTU029_04fb20ed94a538e4fc015531004d292e, putative proteorhodopsin gene, partial cds. PRGD_OTU029_04fb20ed94a538e4fc015531004d292e, putative proteorhodopsin gene, partial cds. KJ928239 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/MEDPR46A6-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 MEDPR46A6-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTCATCACAGTTCCGCTGCTGATGATCGAATTCTATCTGATCCTGCGCGCCATCGCGAACGTGTCATCAGGCATTTTCTGGCGTCTGACCATCGGTTCACTCATCATGCTGGTGGGTGGTTACGCTGGTGAGGTCGGCTATGTAAATGCATGGCTCGGCTTTGTGATTGGTATGGCAGGCTGGTTCTACATTCTGTATGAAATCTTTGCTGGTGAAGCCGGCAAGCTTTCTGCAGAGCAGGCCCCTGAGTCGGTCAAGTCAGCTTTCTCGACCATGCGCTGGATTGTAACCATC LITVPLLMIEFYLILRAIANVSSGIFWRLTIGSLIMLVGGYAGEVGYVNAWLGFVIGMAGWFYILYEIFAGEAGKLSAEQAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTTCCGCTGCTGATGATCGAATTCTATCTGATCCTGCGCGCC---------ATC---GCGAACGTGTCATCA---GGCATT------------------------------------TTCTGGCGT---CTGACCATCGGTTCACTCATCATGCTGGTGGGTGGTTACGCTGGTGAG---------GTC------------------GGC------TAT---------------------------------GTA------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTGATTGGTATGGCAGGCTGGTTCTACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCCGGCAAGCTTTCTGCAGAG------CAG---GCCCCTGAGTCGGTC---AAG---TCA---GCT---TTC---TCG---ACCATG---CGCTGGATTGTAACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-ANVSS-GI------------FWR-LTIGSLIMLVGGYAGE---V------G--Y-----------V----------------------NA------WLG-FVIGMAGWFYILYEI-----F--A-GEAGKLSAE--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-MEDPR46A6]_KJ928242 [III-Alpha6-MEDPR46A6] PRGD_OTU029_1ef6c3527a1f464829fcf5ec1bf830cb gb|KJ928242| PRGD_OTU029_1ef6c3527a1f464829fcf5ec1bf830cb, putative proteorhodopsin gene, partial cds. PRGD_OTU029_1ef6c3527a1f464829fcf5ec1bf830cb, putative proteorhodopsin gene, partial cds. KJ928242 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/MEDPR46A6-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 MEDPR46A6-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -33.9602, -73.3769), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73) CTCATCACAGTTCCGCTGCTGATGATCGAATTCTATCTGATCCTGCGCGCCATCGCGAACGTGTCATCAGGCATTTTCTGGCGTCTGACCATCGGTTCACTCATCATGCTGGTGGGTGGTTACGCTGGTGAGGTTGGCTATGTAAATGCATGGCTCGGCTTTGTGATCGGTATGGCAGGCTGGTTCTACATTCTGTATGAAATCTTTGCTGGTGAAGCCGGCAAGCTTTCTGCAGAGCAGGCCCCTGAGTCGGTCAAGTCAGCTTTCTCGACCATGCGCTGGATTGTAACCATC LITVPLLMIEFYLILRAIANVSSGIFWRLTIGSLIMLVGGYAGEVGYVNAWLGFVIGMAGWFYILYEIFAGEAGKLSAEQAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTTCCGCTGCTGATGATCGAATTCTATCTGATCCTGCGCGCC---------ATC---GCGAACGTGTCATCA---GGCATT------------------------------------TTCTGGCGT---CTGACCATCGGTTCACTCATCATGCTGGTGGGTGGTTACGCTGGTGAG---------GTT------------------GGC------TAT---------------------------------GTA------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTGATCGGTATGGCAGGCTGGTTCTACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCCGGCAAGCTTTCTGCAGAG------CAG---GCCCCTGAGTCGGTC---AAG---TCA---GCT---TTC---TCG---ACCATG---CGCTGGATTGTAACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-ANVSS-GI------------FWR-LTIGSLIMLVGGYAGE---V------G--Y-----------V----------------------NA------WLG-FVIGMAGWFYILYEI-----F--A-GEAGKLSAE--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-MEDPR46A6]_KJ928241 [III-Alpha6-MEDPR46A6] PRGD_OTU029_1c10cdd2786dc90fd503e4132a89f80f gb|KJ928241| PRGD_OTU029_1c10cdd2786dc90fd503e4132a89f80f, putative proteorhodopsin gene, partial cds. PRGD_OTU029_1c10cdd2786dc90fd503e4132a89f80f, putative proteorhodopsin gene, partial cds. KJ928241 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/MEDPR46A6-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 MEDPR46A6-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -33.9602, -73.3769), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73) CTCATCACAGTTCCGCTGCTGATGATCGAATTCTATCTGATCCTGCGCGCCATCGCGAACGTGTCATCAGGCATTTTCTGGCGTCTGACCATCGGTACACTCATCATGCTGGTGGGTGGTTACGCTGGTGAAGTTGGCTATGTAAATGCATGGCTCGGCTTTGTGATCGGTATGGCAGGCTGGTTCTACATCCTGTACGAAATCTTTGCTGGTGAAGCCGGCAAGCTTTCTGCAGAGCAGGCCCCTGAGTCGGTCAAGTCAGCTTTCTCGACCATGCGCTGGATTGTAACCATC LITVPLLMIEFYLILRAIANVSSGIFWRLTIGTLIMLVGGYAGEVGYVNAWLGFVIGMAGWFYILYEIFAGEAGKLSAEQAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTTCCGCTGCTGATGATCGAATTCTATCTGATCCTGCGCGCC---------ATC---GCGAACGTGTCATCA---GGCATT------------------------------------TTCTGGCGT---CTGACCATCGGTACACTCATCATGCTGGTGGGTGGTTACGCTGGTGAA---------GTT------------------GGC------TAT---------------------------------GTA------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTGATCGGTATGGCAGGCTGGTTCTACATCCTGTACGAAATC---------------TTT------GCT---GGTGAAGCCGGCAAGCTTTCTGCAGAG------CAG---GCCCCTGAGTCGGTC---AAG---TCA---GCT---TTC---TCG---ACCATG---CGCTGGATTGTAACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-ANVSS-GI------------FWR-LTIGTLIMLVGGYAGE---V------G--Y-----------V----------------------NA------WLG-FVIGMAGWFYILYEI-----F--A-GEAGKLSAE--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-MEDPR46A6]_KJ928260 [III-Alpha6-MEDPR46A6] PRGD_OTU029_a55c2d3408b3e06b7ca037baa3241033 gb|KJ928260| PRGD_OTU029_a55c2d3408b3e06b7ca037baa3241033, putative proteorhodopsin gene, partial cds. PRGD_OTU029_a55c2d3408b3e06b7ca037baa3241033, putative proteorhodopsin gene, partial cds. KJ928260 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/MEDPR46A6-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 MEDPR46A6-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) CTCATCACAGTTCCGCTGCTGATGATTGAATTCTATCTGATCCTGCGCGCCATCGCGAACGTGTCGTCAGGCATTTTCTGGCGTCTGACCATCGGTTCACTCATCATGCTGGTGGGTGGTTATGCTGGTGAGGTTGGCTATGTAAATGCATGGCTCGGCTTTGTGATCGGTATGGCAGGCTGGTTCTACATTCTGTATGAAATCTTTGCTGGTGAAGCCGGCAAGCTTTCTGCAGAGCAGGCCCCTGAGTCGGTCAAGTCAGCTTTCTCGACCATGCGCTGGATTGTAACCATC LITVPLLMIEFYLILRAIANVSSGIFWRLTIGSLIMLVGGYAGEVGYVNAWLGFVIGMAGWFYILYEIFAGEAGKLSAEQAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTTCCGCTGCTGATGATTGAATTCTATCTGATCCTGCGCGCC---------ATC---GCGAACGTGTCGTCA---GGCATT------------------------------------TTCTGGCGT---CTGACCATCGGTTCACTCATCATGCTGGTGGGTGGTTATGCTGGTGAG---------GTT------------------GGC------TAT---------------------------------GTA------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTTGTGATCGGTATGGCAGGCTGGTTCTACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCCGGCAAGCTTTCTGCAGAG------CAG---GCCCCTGAGTCGGTC---AAG---TCA---GCT---TTC---TCG---ACCATG---CGCTGGATTGTAACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-ANVSS-GI------------FWR-LTIGSLIMLVGGYAGE---V------G--Y-----------V----------------------NA------WLG-FVIGMAGWFYILYEI-----F--A-GEAGKLSAE--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-MEDPR46A6]_KJ928266 [III-Alpha6-MEDPR46A6] PRGD_OTU029_f92530ae58a22cb4eca2238f8de8cc31 gb|KJ928266| PRGD_OTU029_f92530ae58a22cb4eca2238f8de8cc31, putative proteorhodopsin gene, partial cds. PRGD_OTU029_f92530ae58a22cb4eca2238f8de8cc31, putative proteorhodopsin gene, partial cds. KJ928266 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/MEDPR46A6-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 MEDPR46A6-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) CTCATCACAGTTCCACTGCTGATGATCGAATTCTATCTGATCCTGCGCGCCATCGCGAACGTGTCATCTGGCATTTTCTGGCGTCTGACCATCGGTACGATGATCATGCTGGTGGGTGGTTATGCTGGTGAAGTCGGCTATCTGAATGTATGGCTCGGCTTTGTGATCGGTATGGCTGGTTGGTTCTACATCCTGTATGAAATCTTCGCTGGTGAAGCCGGCAAGCTTTCTGCAGAGCAGGCCCCAGAGTCGGTCAAGTCGGCCTTCTCGACCATGCGCTGGATTGTAACCATC LITVPLLMIEFYLILRAIANVSSGIFWRLTIGTMIMLVGGYAGEVGYLNVWLGFVIGMAGWFYILYEIFAGEAGKLSAEQAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTTCCACTGCTGATGATCGAATTCTATCTGATCCTGCGCGCC---------ATC---GCGAACGTGTCATCT---GGCATT------------------------------------TTCTGGCGT---CTGACCATCGGTACGATGATCATGCTGGTGGGTGGTTATGCTGGTGAA---------GTC------------------GGC------TAT---------------------------------CTG------------------------------------------------------------------AATGTA------------------TGGCTCGGC---TTTGTGATCGGTATGGCTGGTTGGTTCTACATCCTGTATGAAATC---------------TTC------GCT---GGTGAAGCCGGCAAGCTTTCTGCAGAG------CAG---GCCCCAGAGTCGGTC---AAG---TCG---GCC---TTC---TCG---ACCATG---CGCTGGATTGTAACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-ANVSS-GI------------FWR-LTIGTMIMLVGGYAGE---V------G--Y-----------L----------------------NV------WLG-FVIGMAGWFYILYEI-----F--A-GEAGKLSAE--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-MEDPR46A6]_KJ928240 [III-Alpha6-MEDPR46A6] PRGD_OTU029_153cfac75649f7af56c87a15c4222dbf gb|KJ928240| PRGD_OTU029_153cfac75649f7af56c87a15c4222dbf, putative proteorhodopsin gene, partial cds. PRGD_OTU029_153cfac75649f7af56c87a15c4222dbf, putative proteorhodopsin gene, partial cds. KJ928240 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/MEDPR46A6-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 MEDPR46A6-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTCATCACAGTTCCGCTGCTGATGATCGAGTTCTATCTGATCCTGCGCGCCATCGCCAACGTATCGTCTGGCATTTTCTGGCGTCTGACTATCGGTACGCTGATCATGCTGGTCGGCGGTTATGCCGGTGAGGTGGGCTATGTTAATGCATGGCTCGGCTTCGTCATCGGGATGGCAGGCTGGTTCTATATCCTGTATGAAATCTTTGCAGGTGAGGCCGGTAAGCTTTCTGCAGAGCAGGCTCCTGAGTCGGTCAAGTCGGCCTTCTCAACCATGCGCTGGATTGTGACCATC LITVPLLMIEFYLILRAIANVSSGIFWRLTIGTLIMLVGGYAGEVGYVNAWLGFVIGMAGWFYILYEIFAGEAGKLSAEQAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTTCCGCTGCTGATGATCGAGTTCTATCTGATCCTGCGCGCC---------ATC---GCCAACGTATCGTCT---GGCATT------------------------------------TTCTGGCGT---CTGACTATCGGTACGCTGATCATGCTGGTCGGCGGTTATGCCGGTGAG---------GTG------------------GGC------TAT---------------------------------GTT------------------------------------------------------------------AATGCA------------------TGGCTCGGC---TTCGTCATCGGGATGGCAGGCTGGTTCTATATCCTGTATGAAATC---------------TTT------GCA---GGTGAGGCCGGTAAGCTTTCTGCAGAG------CAG---GCTCCTGAGTCGGTC---AAG---TCG---GCC---TTC---TCA---ACCATG---CGCTGGATTGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-ANVSS-GI------------FWR-LTIGTLIMLVGGYAGE---V------G--Y-----------V----------------------NA------WLG-FVIGMAGWFYILYEI-----F--A-GEAGKLSAE--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-MEDPR46A6]_KJ928257 [III-Alpha6-MEDPR46A6] PRGD_OTU029_75c2487a77c8194f58afd9579ee55178 gb|KJ928257| PRGD_OTU029_75c2487a77c8194f58afd9579ee55178, putative proteorhodopsin gene, partial cds. PRGD_OTU029_75c2487a77c8194f58afd9579ee55178, putative proteorhodopsin gene, partial cds. KJ928257 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/MEDPR46A6-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 MEDPR46A6-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.935, 18.508), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTGATCACTGTTCCACTGCTGATGATCGAGTTCTACTTGATCCTGCGTGCGATCGCCAATGTCTCGTCTGGCATCTTCTGGCGCCTGACCGTCGGTACACTGATCATGCTGGTTGGTGGTTATGCCGGTGAGGTTGGCTATGTGAATGCATGGCTTGGCTTCGTCATTGGTATGGCAGGTTGGTTCTACATCCTGTACGAGATCTTTGCTGGTGAAGCAGGCAAAGTCTCAGCAGAGCAGGCACCTGAGTCAGTCAAGTCAGCCTTCTCAACCATGCGTTGGATCGTAACCATT LITVPLLMIEFYLILRAIANVSSGIFWRLTVGTLIMLVGGYAGEVGYVNAWLGFVIGMAGWFYILYEIFAGEAGKVSAEQAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTTCCACTGCTGATGATCGAGTTCTACTTGATCCTGCGTGCG---------ATC---GCCAATGTCTCGTCT---GGCATC------------------------------------TTCTGGCGC---CTGACCGTCGGTACACTGATCATGCTGGTTGGTGGTTATGCCGGTGAG---------GTT------------------GGC------TAT---------------------------------GTG------------------------------------------------------------------AATGCA------------------TGGCTTGGC---TTCGTCATTGGTATGGCAGGTTGGTTCTACATCCTGTACGAGATC---------------TTT------GCT---GGTGAAGCAGGCAAAGTCTCAGCAGAG------CAG---GCACCTGAGTCAGTC---AAG---TCA---GCC---TTC---TCA---ACCATG---CGTTGGATCGTAACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-ANVSS-GI------------FWR-LTVGTLIMLVGGYAGE---V------G--Y-----------V----------------------NA------WLG-FVIGMAGWFYILYEI-----F--A-GEAGKVSAE--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-MEDPR46A6]_KJ928261 [III-Alpha6-MEDPR46A6] PRGD_OTU029_a5615f595ba7fcd3d1b6ea4b0485ff18 gb|KJ928261| PRGD_OTU029_a5615f595ba7fcd3d1b6ea4b0485ff18, putative proteorhodopsin gene, partial cds. PRGD_OTU029_a5615f595ba7fcd3d1b6ea4b0485ff18, putative proteorhodopsin gene, partial cds. KJ928261 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/MEDPR46A6-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 MEDPR46A6-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683) CTGATCACTGTTCCACTCCTGATGATTGAGTTCTATCTGATCCTGCGCGCCATCGGCAACGCTTCTGCCGGCATTTTCTGGCGTCTGACAATCGGTACTCTGATCATGCTCGTCGGCGGTTACGCTGGTGAAGCTGGCTACATGAATGTGTGGCTTGGCTTTATTATCGGTATGGTTGGTTGGTTCTACATTCTGTATGAAATCTTTGCTGGTGAAGCTGGCAAGATGTCTGCAGAGCAGGCACCAGACTCAGTCAAGTCCGCTTTCTCAACTATGCGTTGGATCGTAACAATC LITVPLLMIEFYLILRAIGNASAGIFWRLTIGTLIMLVGGYAGEAGYMNVWLGFIIGMVGWFYILYEIFAGEAGKMSAEQAPDSVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTTCCACTCCTGATGATTGAGTTCTATCTGATCCTGCGCGCC---------ATC---GGCAACGCTTCTGCC---GGCATT------------------------------------TTCTGGCGT---CTGACAATCGGTACTCTGATCATGCTCGTCGGCGGTTACGCTGGTGAA---------GCT------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AATGTG------------------TGGCTTGGC---TTTATTATCGGTATGGTTGGTTGGTTCTACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCAAGATGTCTGCAGAG------CAG---GCACCAGACTCAGTC---AAG---TCC---GCT---TTC---TCA---ACTATG---CGTTGGATCGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-GNASA-GI------------FWR-LTIGTLIMLVGGYAGE---A------G--Y-----------M----------------------NV------WLG-FIIGMVGWFYILYEI-----F--A-GEAGKMSAE--Q-APDSV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-SAR116]_KJ928000 [III-Alpha6-SAR116] PRGD_OTU021b_9a0dda11dbc942831cd552c7440c5ed8 gb|KJ928000| PRGD_OTU021b_9a0dda11dbc942831cd552c7440c5ed8, putative proteorhodopsin gene, partial cds. PRGD_OTU021b_9a0dda11dbc942831cd552c7440c5ed8, putative proteorhodopsin gene, partial cds. KJ928000 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/SAR116 C. Puniceispirillum-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 SAR116 C. Puniceispirillum-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTATCACAGTGCCGCTTCTCATGGTTGAGTTCTACTTGATCCTGCGGGCGATCACAAATGTATCAGGTGGCGTTTTCTGGCGTCTGATGATTGGTACGCTTGTCATGCTTGTTGGCGGTTATGCCGGCGAAGTCGGTTATATGGGCGCATGGCTTGGTTTCATCATTGGTATGGCCGGTTGGGCGTACATTCTGTATGAAATCTTTGTTGGTGAAGCCAGCCGGATTTCGGCAGAGCAGGCTCCTGAGTCTGTTAAGTCAGCCTTTTCAACAATGCGTTGGATTGTGACTATT LITVPLLMVEFYLILRAITNVSGGVFWRLMIGTLVMLVGGYAGEVGYMGAWLGFIIGMAGWAYILYEIFVGEASRISAEQAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATCACAGTGCCGCTTCTCATGGTTGAGTTCTACTTGATCCTGCGGGCG---------ATC---ACAAATGTATCAGGT---GGCGTT------------------------------------TTCTGGCGT---CTGATGATTGGTACGCTTGTCATGCTTGTTGGCGGTTATGCCGGCGAA---------GTC------------------GGT------TAT---------------------------------ATG------------------------------------------------------------------GGCGCA------------------TGGCTTGGT---TTCATCATTGGTATGGCCGGTTGGGCGTACATTCTGTATGAAATC---------------TTT------GTT---GGTGAAGCCAGCCGGATTTCGGCAGAG------CAG---GCTCCTGAGTCTGTT---AAG---TCA---GCC---TTT---TCA---ACAATG---CGTTGGATTGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GV------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------M----------------------GA------WLG-FIIGMAGWAYILYEI-----F--V-GEASRISAE--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-SAR116]_KJ928002 [III-Alpha6-SAR116] PRGD_OTU021b_c8126fac85e3359edef15ec2cd6800be gb|KJ928002| PRGD_OTU021b_c8126fac85e3359edef15ec2cd6800be, putative proteorhodopsin gene, partial cds. PRGD_OTU021b_c8126fac85e3359edef15ec2cd6800be, putative proteorhodopsin gene, partial cds. KJ928002 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/SAR116 C. Puniceispirillum-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 SAR116 C. Puniceispirillum-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683) CTTATCACAGTGCCGCTTCTTATGGTTGAGTTCTACTTGATCCTGCGGGCGATCACAAATGTATCAGGTGGCGTTTTCTGGCGTCTGATGATTGGTACGATTGTCATGCTTGTTGGCGGTTATGCTGGCGAAGTCGGTTACATGAGCGCATGGCTTGGTTTCATCATTGGTATGGCCGGTTGGGCCTACATTCTGTATGAAATCTTCGTTGGTGAGGCCAGCCGGATTTCGGCAGAGCAGGCTCCTGAGTCTGTTAAGTCAGCCTTTTCAACAATGCGTTGGATTGTGACTATT LITVPLLMVEFYLILRAITNVSGGVFWRLMIGTIVMLVGGYAGEVGYMSAWLGFIIGMAGWAYILYEIFVGEASRISAEQAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATCACAGTGCCGCTTCTTATGGTTGAGTTCTACTTGATCCTGCGGGCG---------ATC---ACAAATGTATCAGGT---GGCGTT------------------------------------TTCTGGCGT---CTGATGATTGGTACGATTGTCATGCTTGTTGGCGGTTATGCTGGCGAA---------GTC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AGCGCA------------------TGGCTTGGT---TTCATCATTGGTATGGCCGGTTGGGCCTACATTCTGTATGAAATC---------------TTC------GTT---GGTGAGGCCAGCCGGATTTCGGCAGAG------CAG---GCTCCTGAGTCTGTT---AAG---TCA---GCC---TTT---TCA---ACAATG---CGTTGGATTGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GV------------FWR-LMIGTIVMLVGGYAGE---V------G--Y-----------M----------------------SA------WLG-FIIGMAGWAYILYEI-----F--V-GEASRISAE--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-SAR116]_KJ928001 [III-Alpha6-SAR116] PRGD_OTU021b_9b29638c6d79bd7c93ca4900597f591f gb|KJ928001| PRGD_OTU021b_9b29638c6d79bd7c93ca4900597f591f, putative proteorhodopsin gene, partial cds. PRGD_OTU021b_9b29638c6d79bd7c93ca4900597f591f, putative proteorhodopsin gene, partial cds. KJ928001 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/SAR116 C. Puniceispirillum-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 SAR116 C. Puniceispirillum-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) CTTATCACAGTGCCGCTTCTCATGGTTGAGTTCTACTTGATTCTGCGGGCGATCACAAATGTGTCTGGTGGCGTATTCTGGCGTCTGATGATTGGTACTCTTGTCATGCTTGTCGGCGGTTACGCAGGCGAAGTCGGTTATGTCGGCGCATGGCTTGGTTTCATCATTGGTATGGCTGGTTGGGCATACATTCTGTACGAGATTTTCGCTGGCGAAGCTGGCCGTATTTCGTCGGAGCAGGCACCTGAGTCTGTTAAGTCAGCCTTTTCAACAATGCGTTGGATTGTGACCATT LITVPLLMVEFYLILRAITNVSGGVFWRLMIGTLVMLVGGYAGEVGYVGAWLGFIIGMAGWAYILYEIFAGEAGRISSEQAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATCACAGTGCCGCTTCTCATGGTTGAGTTCTACTTGATTCTGCGGGCG---------ATC---ACAAATGTGTCTGGT---GGCGTA------------------------------------TTCTGGCGT---CTGATGATTGGTACTCTTGTCATGCTTGTCGGCGGTTACGCAGGCGAA---------GTC------------------GGT------TAT---------------------------------GTC------------------------------------------------------------------GGCGCA------------------TGGCTTGGT---TTCATCATTGGTATGGCTGGTTGGGCATACATTCTGTACGAGATT---------------TTC------GCT---GGCGAAGCTGGCCGTATTTCGTCGGAG------CAG---GCACCTGAGTCTGTT---AAG---TCA---GCC---TTT---TCA---ACAATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GV------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------V----------------------GA------WLG-FIIGMAGWAYILYEI-----F--A-GEAGRISSE--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-SAR116]_KJ928003 [III-Alpha6-SAR116] PRGD_OTU021b_e9b09d0e4e09ebcff9fe53e8475ce887 gb|KJ928003| PRGD_OTU021b_e9b09d0e4e09ebcff9fe53e8475ce887, putative proteorhodopsin gene, partial cds. PRGD_OTU021b_e9b09d0e4e09ebcff9fe53e8475ce887, putative proteorhodopsin gene, partial cds. KJ928003 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/SAR116 C. Puniceispirillum-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 SAR116 C. Puniceispirillum-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTAATCACAGTACCGCTTCTCATGGTTGAGTTCTACTTGATCCTGCGGGCAATCACAAATGTGTCTGGTGGCGTTTTCTGGCGTCTGATGATTGGTACTATAGTCATGCTTGTCGGCGGTTACGCAGGCGAAGTCGGTTATATCGGTGCATGGCTTGGTTTCATCATTGGTATGGCTGGTTGGGCATACATTCTGTACGAGATTTTCGCTGGCGAAGCTGGCCGTATTTCGTCGGAGCAGGCACCTGAGTCTGTTAAGTCAGCCTTTTCAACTATGCGTTGGATTGTGACCATT LITVPLLMVEFYLILRAITNVSGGVFWRLMIGTIVMLVGGYAGEVGYIGAWLGFIIGMAGWAYILYEIFAGEAGRISSEQAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACAGTACCGCTTCTCATGGTTGAGTTCTACTTGATCCTGCGGGCA---------ATC---ACAAATGTGTCTGGT---GGCGTT------------------------------------TTCTGGCGT---CTGATGATTGGTACTATAGTCATGCTTGTCGGCGGTTACGCAGGCGAA---------GTC------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------GGTGCA------------------TGGCTTGGT---TTCATCATTGGTATGGCTGGTTGGGCATACATTCTGTACGAGATT---------------TTC------GCT---GGCGAAGCTGGCCGTATTTCGTCGGAG------CAG---GCACCTGAGTCTGTT---AAG---TCA---GCC---TTT---TCA---ACTATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GV------------FWR-LMIGTIVMLVGGYAGE---V------G--Y-----------I----------------------GA------WLG-FIIGMAGWAYILYEI-----F--A-GEAGRISSE--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-SAR116]_KJ927999 [III-Alpha6-SAR116] PRGD_OTU021b_96577facb9e64f5d1d372080fd6e763f gb|KJ927999| PRGD_OTU021b_96577facb9e64f5d1d372080fd6e763f, putative proteorhodopsin gene, partial cds. PRGD_OTU021b_96577facb9e64f5d1d372080fd6e763f, putative proteorhodopsin gene, partial cds. KJ927999 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/SAR116 C. Puniceispirillum-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 SAR116 C. Puniceispirillum-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419) CTTATCACAGTGCCGCTTCTCATGGTTGAGTTCTACTTGATCCTGCGGGCTATCACAAATGTATCGGGTGGCGTTTTCTGGCGTCTGATGGTTGGTACTTTGATCATGCTTGTCGGTGGTTATGCTGGCGAAGTCGGTTACGTTGGCGCATGGCTTGGTTTCATCATTGGTATGGCTGGTTGGGCATACATTCTGTATGAGATCTTTGCTGGTGAAGCTAGCCGGATTTCGGCAGAGCAGGCTCCTGAGTCTGTCAAGTCAGCCTTTTCAACCATGCGTTGGATTGTGACCATT LITVPLLMVEFYLILRAITNVSGGVFWRLMVGTLIMLVGGYAGEVGYVGAWLGFIIGMAGWAYILYEIFAGEASRISAEQAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATCACAGTGCCGCTTCTCATGGTTGAGTTCTACTTGATCCTGCGGGCT---------ATC---ACAAATGTATCGGGT---GGCGTT------------------------------------TTCTGGCGT---CTGATGGTTGGTACTTTGATCATGCTTGTCGGTGGTTATGCTGGCGAA---------GTC------------------GGT------TAC---------------------------------GTT------------------------------------------------------------------GGCGCA------------------TGGCTTGGT---TTCATCATTGGTATGGCTGGTTGGGCATACATTCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTAGCCGGATTTCGGCAGAG------CAG---GCTCCTGAGTCTGTC---AAG---TCA---GCC---TTT---TCA---ACCATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GV------------FWR-LMVGTLIMLVGGYAGE---V------G--Y-----------V----------------------GA------WLG-FIIGMAGWAYILYEI-----F--A-GEASRISAE--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-SAR116]_KJ927998 [III-Alpha6-SAR116] PRGD_OTU021b_898751a49e03ebbf6c3384c272536a36 gb|KJ927998| PRGD_OTU021b_898751a49e03ebbf6c3384c272536a36, putative proteorhodopsin gene, partial cds. PRGD_OTU021b_898751a49e03ebbf6c3384c272536a36, putative proteorhodopsin gene, partial cds. KJ927998 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/SAR116 C. Puniceispirillum-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 SAR116 C. Puniceispirillum-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683) CTGATCACAGTGCCGCTTCTAATGGTCGAGTTTTACTTGATCCTGCGGGCTATCACGAATGTATCAGGTGGCGTTTTCTGGCGTCTGATGGTTGGTACTTTGGTCATGCTTGTCGGTGGTTACGCTGGCGAAGTCGGTTACATGGGTGCATGGCTTGGTTTCATCATCGGTATGGCTGGTTGGGCTTACATCTTGTATGAGATCTTTGCTGGTGAAGCTAGCCGGATTTCGGCAGAGCAGGCTCCTGAGTCTGTTAAGTCAGCCTTTTCAACTATGCGTTGGATTGTGACTATT LITVPLLMVEFYLILRAITNVSGGVFWRLMVGTLVMLVGGYAGEVGYMGAWLGFIIGMAGWAYILYEIFAGEASRISAEQAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTGCCGCTTCTAATGGTCGAGTTTTACTTGATCCTGCGGGCT---------ATC---ACGAATGTATCAGGT---GGCGTT------------------------------------TTCTGGCGT---CTGATGGTTGGTACTTTGGTCATGCTTGTCGGTGGTTACGCTGGCGAA---------GTC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GGTGCA------------------TGGCTTGGT---TTCATCATCGGTATGGCTGGTTGGGCTTACATCTTGTATGAGATC---------------TTT------GCT---GGTGAAGCTAGCCGGATTTCGGCAGAG------CAG---GCTCCTGAGTCTGTT---AAG---TCA---GCC---TTT---TCA---ACTATG---CGTTGGATTGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GV------------FWR-LMVGTLVMLVGGYAGE---V------G--Y-----------M----------------------GA------WLG-FIIGMAGWAYILYEI-----F--A-GEASRISAE--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha6-SAR116]_KJ927997 [III-Alpha6-SAR116] PRGD_OTU021b_otuREP_d6d7578ca18555f36016749de9bf9b79 gb|KJ927997| PRGD_OTU021b_otuREP_d6d7578ca18555f36016749de9bf9b79, putative proteorhodopsin gene, partial cds. PRGD_OTU021b_otuREP_d6d7578ca18555f36016749de9bf9b79, putative proteorhodopsin gene, partial cds. KJ927997 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 6/SAR116 C. Puniceispirillum-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 6 SAR116 C. Puniceispirillum-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) CTAATCACAGTGCCGTTGCTGATGGTAGAATTCTACCTGATCCTTCGCGCTATCGGTTCAGTTTCAGGCGGCATTTTCTGGCGTCTGATGATTGGTACACTAGTCATGCTTATCGGTGGTTATGCCGGTGAAGCAGGTTACCTAAATCTAACAGTTGGTTTCGTCATCGGGATGGCAGGCTGGGCCTACATTCTGTATGAAATCTTCGCTGGTGAAGCCGGCAAGATGAACGCAGACCATGCTCCAGATTCAGTAAAGTCAGCTTTCTCAACAATGCGTTGGATTGTGACAATC LITVPLLMVEFYLILRAIGSVSGGIFWRLMIGTLVMLIGGYAGEAGYLNLTVGFVIGMAGWAYILYEIFAGEAGKMNADHAPDSVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACAGTGCCGTTGCTGATGGTAGAATTCTACCTGATCCTTCGCGCT---------ATC---GGTTCAGTTTCAGGC---GGCATT------------------------------------TTCTGGCGT---CTGATGATTGGTACACTAGTCATGCTTATCGGTGGTTATGCCGGTGAA---------GCA------------------GGT------TAC---------------------------------CTA------------------------------------------------------------------AATCTA------------------ACAGTTGGT---TTCGTCATCGGGATGGCAGGCTGGGCCTACATTCTGTATGAAATC---------------TTC------GCT---GGTGAAGCCGGCAAGATGAACGCAGAC------CAT---GCTCCAGATTCAGTA---AAG---TCA---GCT---TTC---TCA---ACAATG---CGTTGGATTGTGACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-GSVSG-GI------------FWR-LMIGTLVMLIGGYAGE---A------G--Y-----------L----------------------NL------TVG-FVIGMAGWAYILYEI-----F--A-GEAGKMNAD--H-APDSV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta2-a]_KJ928808 [III-Beta2-a] PRGD_OTU054_214c198b98f2fd5af0cf5e6b32cd1cb9 gb|KJ928808| PRGD_OTU054_214c198b98f2fd5af0cf5e6b32cd1cb9, putative proteorhodopsin gene, partial cds. PRGD_OTU054_214c198b98f2fd5af0cf5e6b32cd1cb9, putative proteorhodopsin gene, partial cds. KJ928808 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 2/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTGATTACTGTCCCGCTGTTGATGATCGAGTTCTACCTGATCCTCAGGGCTATTACGAATGTCTCTAGCGGTATCTTTTGGCGACTGCTGATTGGGACAACCGTCATGCTGGTTGGCGGGTATCTAGGTGAAGCTAACTACATGAACTCCTATTTGGCTTTCGCCATCGGTATGGCTGGCTGGGCTTATATCCTTTACGAAATATTTTTTGGCGAGGCGAGTAAGGTCAATAAGCAGTCCGCACCTCCTCAGGTCCAATCAGCTTTCTCGACAATGCGTTGGATCGTTACTATT LITVPLLMIEFYLILRAITNVSSGIFWRLLIGTTVMLVGGYLGEANYMNSYLAFAIGMAGWAYILYEIFFGEASKVNKQSAPPQVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTCCCGCTGTTGATGATCGAGTTCTACCTGATCCTCAGGGCT---------ATT---ACGAATGTCTCTAGC---GGTATC------------------------------------TTTTGGCGA---CTGCTGATTGGGACAACCGTCATGCTGGTTGGCGGGTATCTAGGTGAA---------GCT------------------AAC------TAC---------------------------------ATG------------------------------------------------------------------AACTCC------------------TATTTGGCT---TTCGCCATCGGTATGGCTGGCTGGGCTTATATCCTTTACGAAATA---------------TTT------TTT---GGCGAGGCGAGTAAGGTCAATAAGCAG------TCC---GCACCTCCTCAGGTC---CAA---TCA---GCT---TTC---TCG---ACAATG---CGTTGGATCGTTACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSS-GI------------FWR-LLIGTTVMLVGGYLGE---A------N--Y-----------M----------------------NS------YLA-FAIGMAGWAYILYEI-----F--F-GEASKVNKQ--S-APPQV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta2-a]_KJ928818 [III-Beta2-a] PRGD_OTU054_edb7563b8e2ba9e86ecefdc972a9aaca gb|KJ928818| PRGD_OTU054_edb7563b8e2ba9e86ecefdc972a9aaca, putative proteorhodopsin gene, partial cds. PRGD_OTU054_edb7563b8e2ba9e86ecefdc972a9aaca, putative proteorhodopsin gene, partial cds. KJ928818 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 2/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATTACTGTCCCGCTGTTGATGATCGAGTTCTACCTAATTCTCAGGGCTATTACGAATGTCTCTAGCGGTATCTTTTGGCGACTGCTGATTGGGACAACCGTCATGCTGGTTGGCGGGTATCTAGGTGAAGCTAACTACATGAACTCCTATTTGGCTTTCGCCATCGGTATGGCTGGCTGGGCTTATATCCTTTACGAAATATTTTTTGGCGAGGCGAGTAAGGTCAATAAGCAGTCCGCACCTCCTCAGGTCCAATCAGCTTTCTCGACAATGCGTTGGATCGTTACTATT LITVPLLMIEFYLILRAITNVSSGIFWRLLIGTTVMLVGGYLGEANYMNSYLAFAIGMAGWAYILYEIFFGEASKVNKQSAPPQVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTCCCGCTGTTGATGATCGAGTTCTACCTAATTCTCAGGGCT---------ATT---ACGAATGTCTCTAGC---GGTATC------------------------------------TTTTGGCGA---CTGCTGATTGGGACAACCGTCATGCTGGTTGGCGGGTATCTAGGTGAA---------GCT------------------AAC------TAC---------------------------------ATG------------------------------------------------------------------AACTCC------------------TATTTGGCT---TTCGCCATCGGTATGGCTGGCTGGGCTTATATCCTTTACGAAATA---------------TTT------TTT---GGCGAGGCGAGTAAGGTCAATAAGCAG------TCC---GCACCTCCTCAGGTC---CAA---TCA---GCT---TTC---TCG---ACAATG---CGTTGGATCGTTACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSS-GI------------FWR-LLIGTTVMLVGGYLGE---A------N--Y-----------M----------------------NS------YLA-FAIGMAGWAYILYEI-----F--F-GEASKVNKQ--S-APPQV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta2-a]_KJ928810 [III-Beta2-a] PRGD_OTU054_2edf83eaa38418780009656a9e101f5b gb|KJ928810| PRGD_OTU054_2edf83eaa38418780009656a9e101f5b, putative proteorhodopsin gene, partial cds. PRGD_OTU054_2edf83eaa38418780009656a9e101f5b, putative proteorhodopsin gene, partial cds. KJ928810 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 2/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) TTGATTACCGTCCCGCTGTTGATGATCGAGTTCTACCTGATTCTCAGAGCTATTACGAATGTCTCTAGCGGTATCTTTTGGCGACTGCTGATTGGGACAACCGTCATGCTGGTTGGCGGGTATCTAGGTGAAGCTAACTACATGAACTCCTATTTGGCTTTCGCCATCGGTATGGCTGGCTGGGCTTATATCCTTTACGAAATATTTTTTGGCGAGGCGAGTAAGGTCAATAAGCAGTCCGCACCTCCTCAGGTCCAATCAGCTTTCTCGACAATGCGTTGGATCGTTACTATT LITVPLLMIEFYLILRAITNVSSGIFWRLLIGTTVMLVGGYLGEANYMNSYLAFAIGMAGWAYILYEIFFGEASKVNKQSAPPQVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACCGTCCCGCTGTTGATGATCGAGTTCTACCTGATTCTCAGAGCT---------ATT---ACGAATGTCTCTAGC---GGTATC------------------------------------TTTTGGCGA---CTGCTGATTGGGACAACCGTCATGCTGGTTGGCGGGTATCTAGGTGAA---------GCT------------------AAC------TAC---------------------------------ATG------------------------------------------------------------------AACTCC------------------TATTTGGCT---TTCGCCATCGGTATGGCTGGCTGGGCTTATATCCTTTACGAAATA---------------TTT------TTT---GGCGAGGCGAGTAAGGTCAATAAGCAG------TCC---GCACCTCCTCAGGTC---CAA---TCA---GCT---TTC---TCG---ACAATG---CGTTGGATCGTTACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSS-GI------------FWR-LLIGTTVMLVGGYLGE---A------N--Y-----------M----------------------NS------YLA-FAIGMAGWAYILYEI-----F--F-GEASKVNKQ--S-APPQV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta2-a]_KJ928814 [III-Beta2-a] PRGD_OTU054_858c2a03a701bda55e4e9651c9a734aa gb|KJ928814| PRGD_OTU054_858c2a03a701bda55e4e9651c9a734aa, putative proteorhodopsin gene, partial cds. PRGD_OTU054_858c2a03a701bda55e4e9651c9a734aa, putative proteorhodopsin gene, partial cds. KJ928814 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 2/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419) TTGATTACTGTCCCGCTGTTGATGATCGAGTTCTACCTGATCCTCAAAGCTATTACGAATGTCTCTAGCGGTATCTTTTGGCGACTACTGATTGGGACAACCGTCATGCTGGTTGGCGGGTATCTAGGTGAAGCTAACTACATGAACTCCTATTTGGCTTTCGCCATCGGTATGGCTGGCTGGGCTTATATCCTTTACGAAATATTTTTTGGCGAGGCGAGTAAGGTCAATAAGCAGTCCGCACCTCCTCAGGTCCAATCAGCTTTCTCGACAATGCGTTGGATCGTTACTATT LITVPLLMIEFYLILKAITNVSSGIFWRLLIGTTVMLVGGYLGEANYMNSYLAFAIGMAGWAYILYEIFFGEASKVNKQSAPPQVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTCCCGCTGTTGATGATCGAGTTCTACCTGATCCTCAAAGCT---------ATT---ACGAATGTCTCTAGC---GGTATC------------------------------------TTTTGGCGA---CTACTGATTGGGACAACCGTCATGCTGGTTGGCGGGTATCTAGGTGAA---------GCT------------------AAC------TAC---------------------------------ATG------------------------------------------------------------------AACTCC------------------TATTTGGCT---TTCGCCATCGGTATGGCTGGCTGGGCTTATATCCTTTACGAAATA---------------TTT------TTT---GGCGAGGCGAGTAAGGTCAATAAGCAG------TCC---GCACCTCCTCAGGTC---CAA---TCA---GCT---TTC---TCG---ACAATG---CGTTGGATCGTTACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILKA---I-TNVSS-GI------------FWR-LLIGTTVMLVGGYLGE---A------N--Y-----------M----------------------NS------YLA-FAIGMAGWAYILYEI-----F--F-GEASKVNKQ--S-APPQV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta2-a]_KJ928815 [III-Beta2-a] PRGD_OTU054_91e0901f34230768dcd29ab9ac4c60df gb|KJ928815| PRGD_OTU054_91e0901f34230768dcd29ab9ac4c60df, putative proteorhodopsin gene, partial cds. PRGD_OTU054_91e0901f34230768dcd29ab9ac4c60df, putative proteorhodopsin gene, partial cds. KJ928815 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 2/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) TTGATTACTGTCCCGCTGTTGATGATCGAGTTCTACCTGATCCTCAGAGCTATTACGAATGTTTCTAGCGGTATCTTTTGGCGACTGCTGATTGGGACAACCGTCATGCTAGTTGGCGGATATCTAGGTGAAGCTAACTACATGAACTCCTATTTGGCTTTCGCCATCGGTATGGCTGGCTGGGCTTATATCCTTTACGAAATATTTTTTGGCGAGGCGAGTAAGGTCAATAAGCAGTCCGCACCTCCTCAGGTCCAATCAGCTTTCTCGACAATGCGTTGGATCGTTACTATT LITVPLLMIEFYLILRAITNVSSGIFWRLLIGTTVMLVGGYLGEANYMNSYLAFAIGMAGWAYILYEIFFGEASKVNKQSAPPQVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTCCCGCTGTTGATGATCGAGTTCTACCTGATCCTCAGAGCT---------ATT---ACGAATGTTTCTAGC---GGTATC------------------------------------TTTTGGCGA---CTGCTGATTGGGACAACCGTCATGCTAGTTGGCGGATATCTAGGTGAA---------GCT------------------AAC------TAC---------------------------------ATG------------------------------------------------------------------AACTCC------------------TATTTGGCT---TTCGCCATCGGTATGGCTGGCTGGGCTTATATCCTTTACGAAATA---------------TTT------TTT---GGCGAGGCGAGTAAGGTCAATAAGCAG------TCC---GCACCTCCTCAGGTC---CAA---TCA---GCT---TTC---TCG---ACAATG---CGTTGGATCGTTACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSS-GI------------FWR-LLIGTTVMLVGGYLGE---A------N--Y-----------M----------------------NS------YLA-FAIGMAGWAYILYEI-----F--F-GEASKVNKQ--S-APPQV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta2-a]_KJ928806 [III-Beta2-a] PRGD_OTU054_otuREP_f2c2a3b4cef2b1749889fe50bb3b3b24 gb|KJ928806| PRGD_OTU054_otuREP_f2c2a3b4cef2b1749889fe50bb3b3b24, putative proteorhodopsin gene, partial cds. PRGD_OTU054_otuREP_f2c2a3b4cef2b1749889fe50bb3b3b24, putative proteorhodopsin gene, partial cds. KJ928806 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 2/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Indian Ocean (-35.05, 23.73; -33.28, 45.35) CTAATTACTGTTCCGCTGTTGATGATCGAGTTTTACCTGATCCTCAGAGCGATTACGAATGTCTCTAGCGGTATCTTTTGGCGACTATTGATCGGGACAACGGTCATGTTAGTTGGCGGGTATCTAGGTGAAGCTAACTACATGAATTCGTATTTGGCTTTCGCCATCGGTATGGCTGGCTGGGCTTACATCCTTTACGAAATATTTTTTGGCGAGGCGAGTAAGGTCAACAAGCAGTCCGCACCTCCTCAGGTCCAATCAGCTTTCTCGACCATGCGTTGGATCGTTACTATT LITVPLLMIEFYLILRAITNVSSGIFWRLLIGTTVMLVGGYLGEANYMNSYLAFAIGMAGWAYILYEIFFGEASKVNKQSAPPQVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTTCCGCTGTTGATGATCGAGTTTTACCTGATCCTCAGAGCG---------ATT---ACGAATGTCTCTAGC---GGTATC------------------------------------TTTTGGCGA---CTATTGATCGGGACAACGGTCATGTTAGTTGGCGGGTATCTAGGTGAA---------GCT------------------AAC------TAC---------------------------------ATG------------------------------------------------------------------AATTCG------------------TATTTGGCT---TTCGCCATCGGTATGGCTGGCTGGGCTTACATCCTTTACGAAATA---------------TTT------TTT---GGCGAGGCGAGTAAGGTCAACAAGCAG------TCC---GCACCTCCTCAGGTC---CAA---TCA---GCT---TTC---TCG---ACCATG---CGTTGGATCGTTACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSS-GI------------FWR-LLIGTTVMLVGGYLGE---A------N--Y-----------M----------------------NS------YLA-FAIGMAGWAYILYEI-----F--F-GEASKVNKQ--S-APPQV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta2-a]_KJ928820 [III-Beta2-a] PRGD_OTU054_f133020dfa01c51bd115720e60e85417 gb|KJ928820| PRGD_OTU054_f133020dfa01c51bd115720e60e85417, putative proteorhodopsin gene, partial cds. PRGD_OTU054_f133020dfa01c51bd115720e60e85417, putative proteorhodopsin gene, partial cds. KJ928820 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 2/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419) CTGATTACTGTTCCGCTGTTGATGATCGAGTTCTATCTCATTCTCAGAGCTATTACGAATGTCTCTAGCGGTATCTTTTGGCGACTATTGATCGGGACAACCGTCATGCTGGTTGGCGGATATCTAGGTGAAACTAACTACATGAATTCCTATTTGGCCTTCGCGATTGGTATGGCTGGCTGGGCATATATCCTGTACGAGATATTCTTCGGCGAGGCGAGTAAGGTTAATAAGCAGTCTGCACCTCCTCAGGTCCAATCAGCTTTTTCGACCATGCGTTGGATCGTTACTATT LITVPLLMIEFYLILRAITNVSSGIFWRLLIGTTVMLVGGYLGETNYMNSYLAFAIGMAGWAYILYEIFFGEASKVNKQSAPPQVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTTCCGCTGTTGATGATCGAGTTCTATCTCATTCTCAGAGCT---------ATT---ACGAATGTCTCTAGC---GGTATC------------------------------------TTTTGGCGA---CTATTGATCGGGACAACCGTCATGCTGGTTGGCGGATATCTAGGTGAA---------ACT------------------AAC------TAC---------------------------------ATG------------------------------------------------------------------AATTCC------------------TATTTGGCC---TTCGCGATTGGTATGGCTGGCTGGGCATATATCCTGTACGAGATA---------------TTC------TTC---GGCGAGGCGAGTAAGGTTAATAAGCAG------TCT---GCACCTCCTCAGGTC---CAA---TCA---GCT---TTT---TCG---ACCATG---CGTTGGATCGTTACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSS-GI------------FWR-LLIGTTVMLVGGYLGE---T------N--Y-----------M----------------------NS------YLA-FAIGMAGWAYILYEI-----F--F-GEASKVNKQ--S-APPQV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta2-a]_KJ928813 [III-Beta2-a] PRGD_OTU054_564992595f6ea8677722eed423fae8b9 gb|KJ928813| PRGD_OTU054_564992595f6ea8677722eed423fae8b9, putative proteorhodopsin gene, partial cds. PRGD_OTU054_564992595f6ea8677722eed423fae8b9, putative proteorhodopsin gene, partial cds. KJ928813 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 2/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -33.9602, -73.3769), English Channel (48.7717, -3.9683) CTGATTACTGTTCCGCTGTTGATGATCGAATTCTACCTGATCCTTAGAGCTATTACGAATGTCTCTAGCGGTATCTTTTGGCGACTATTGATTGGGACAACCGTTATGCTGGTTGGCGGTTATTTAGGTGAAGCTAACTACATGAATTCCTATTTGGCCTTCGCGATCGGCATGGCTGGCTGGGCTTATATCCTTTACGAAATATTTTTTGGCGAGGCCAGTAAAGTCAACAAGCAGTCCGCACCTCCCCAGGTCCAATCAGCTTTCTCGACCATGCGTTGGATCGTTACTATT LITVPLLMIEFYLILRAITNVSSGIFWRLLIGTTVMLVGGYLGEANYMNSYLAFAIGMAGWAYILYEIFFGEASKVNKQSAPPQVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTTCCGCTGTTGATGATCGAATTCTACCTGATCCTTAGAGCT---------ATT---ACGAATGTCTCTAGC---GGTATC------------------------------------TTTTGGCGA---CTATTGATTGGGACAACCGTTATGCTGGTTGGCGGTTATTTAGGTGAA---------GCT------------------AAC------TAC---------------------------------ATG------------------------------------------------------------------AATTCC------------------TATTTGGCC---TTCGCGATCGGCATGGCTGGCTGGGCTTATATCCTTTACGAAATA---------------TTT------TTT---GGCGAGGCCAGTAAAGTCAACAAGCAG------TCC---GCACCTCCCCAGGTC---CAA---TCA---GCT---TTC---TCG---ACCATG---CGTTGGATCGTTACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSS-GI------------FWR-LLIGTTVMLVGGYLGE---A------N--Y-----------M----------------------NS------YLA-FAIGMAGWAYILYEI-----F--F-GEASKVNKQ--S-APPQV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta2-a]_KJ928817 [III-Beta2-a] PRGD_OTU054_c8bdafadbb4ae984a0bfa62cd90b33ba gb|KJ928817| PRGD_OTU054_c8bdafadbb4ae984a0bfa62cd90b33ba, putative proteorhodopsin gene, partial cds. PRGD_OTU054_c8bdafadbb4ae984a0bfa62cd90b33ba, putative proteorhodopsin gene, partial cds. KJ928817 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 2/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATTACTGTTCCACTGTTGATGATCGAATTCTACTTGATTCTTAGAGCTATTACGAATGTCTCTAGCGGTATCTTTTGGCGACTATTGATTGGCACGACTGTCATGCTGGTTGGCGGATATCTAGGTGAAGCTAACTACATGAATACCTATTTGGCCTTCGCGATCGGCATGGCTGGCTGGGCTTATATTCTTTACGAGATATTTTTTGGCGAGGCGAGTAAAGTCAATAAGCAATCCGCACCGCCTCAGGTTCAATCAGCTTTCTCTACCATGCGTTGGATCGTCACTATT LITVPLLMIEFYLILRAITNVSSGIFWRLLIGTTVMLVGGYLGEANYMNTYLAFAIGMAGWAYILYEIFFGEASKVNKQSAPPQVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTTCCACTGTTGATGATCGAATTCTACTTGATTCTTAGAGCT---------ATT---ACGAATGTCTCTAGC---GGTATC------------------------------------TTTTGGCGA---CTATTGATTGGCACGACTGTCATGCTGGTTGGCGGATATCTAGGTGAA---------GCT------------------AAC------TAC---------------------------------ATG------------------------------------------------------------------AATACC------------------TATTTGGCC---TTCGCGATCGGCATGGCTGGCTGGGCTTATATTCTTTACGAGATA---------------TTT------TTT---GGCGAGGCGAGTAAAGTCAATAAGCAA------TCC---GCACCGCCTCAGGTT---CAA---TCA---GCT---TTC---TCT---ACCATG---CGTTGGATCGTCACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSS-GI------------FWR-LLIGTTVMLVGGYLGE---A------N--Y-----------M----------------------NT------YLA-FAIGMAGWAYILYEI-----F--F-GEASKVNKQ--S-APPQV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta2-a]_KJ928819 [III-Beta2-a] PRGD_OTU054_f0b8c5fee2c4ceae5e61a9a41d1b9a6d gb|KJ928819| PRGD_OTU054_f0b8c5fee2c4ceae5e61a9a41d1b9a6d, putative proteorhodopsin gene, partial cds. PRGD_OTU054_f0b8c5fee2c4ceae5e61a9a41d1b9a6d, putative proteorhodopsin gene, partial cds. KJ928819 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 2/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCATCACCGTCCCATTGCTGATGATTGAGTTCTATCTGATCCTCAGGGCGATTACGAATGTTTCCAGCGGCATTTTTTGGCGACTGTTGATTGGGACAGTCGTTATGCTTGTTGGCGGATATCTGGGTGAAGCCAACTATATGAACTCGTACTTAGCTTTCGGGATCGGTATGGTCGGCTGGGCTTATATCCTCTACGAAATATTTTTTGGCGAGGCTAGTAAGGTCAACAAGCAGTCCGCGCCTCCTCAGGTTCAATCCGCTTTCGCTACGATGCGCTGGATCGTCACTATT LITVPLLMIEFYLILRAITNVSSGIFWRLLIGTVVMLVGGYLGEANYMNSYLAFGIGMVGWAYILYEIFFGEASKVNKQSAPPQVQSAFATMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACCGTCCCATTGCTGATGATTGAGTTCTATCTGATCCTCAGGGCG---------ATT---ACGAATGTTTCCAGC---GGCATT------------------------------------TTTTGGCGA---CTGTTGATTGGGACAGTCGTTATGCTTGTTGGCGGATATCTGGGTGAA---------GCC------------------AAC------TAT---------------------------------ATG------------------------------------------------------------------AACTCG------------------TACTTAGCT---TTCGGGATCGGTATGGTCGGCTGGGCTTATATCCTCTACGAAATA---------------TTT------TTT---GGCGAGGCTAGTAAGGTCAACAAGCAG------TCC---GCGCCTCCTCAGGTT---CAA---TCC---GCT---TTC---GCT---ACGATG---CGCTGGATCGTCACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSS-GI------------FWR-LLIGTVVMLVGGYLGE---A------N--Y-----------M----------------------NS------YLA-FGIGMVGWAYILYEI-----F--F-GEASKVNKQ--S-APPQV-Q-S-A-F-A-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta2-a]_KJ928812 [III-Beta2-a] PRGD_OTU054_4f88e3fd734a4a7a8af026427bd34ae7 gb|KJ928812| PRGD_OTU054_4f88e3fd734a4a7a8af026427bd34ae7, putative proteorhodopsin gene, partial cds. PRGD_OTU054_4f88e3fd734a4a7a8af026427bd34ae7, putative proteorhodopsin gene, partial cds. KJ928812 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 2/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781), Mediterranean Sea (38.6308, 7.9097) TTGATTACTGTCCCGCTGTTGATGATTGAGTTCTATCTGATTCTCAGAGCGATTACGAAGGTCTCTGGCGGCATTTTTTGGCGACTGTTGATTGGTACAGTTGTGATGCTTGTTGGCGGATACTTAGGTGAAGCTGGCTACATGAATTCGTATTTAGCATTCACGATCGGGATCGTGGGATGGGCTTACATTCTTTACGAAGTATTTTTCGGCGAGGCGAGTAAAGTTAATAAACAGTCCGCACCGCCTCAGGTCCAGTCAGCCTTCGTGACTATGCGTTGGATCGTCACTATT LITVPLLMIEFYLILRAITKVSGGIFWRLLIGTVVMLVGGYLGEAGYMNSYLAFTIGIVGWAYILYEVFFGEASKVNKQSAPPQVQSAFVTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTCCCGCTGTTGATGATTGAGTTCTATCTGATTCTCAGAGCG---------ATT---ACGAAGGTCTCTGGC---GGCATT------------------------------------TTTTGGCGA---CTGTTGATTGGTACAGTTGTGATGCTTGTTGGCGGATACTTAGGTGAA---------GCT------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AATTCG------------------TATTTAGCA---TTCACGATCGGGATCGTGGGATGGGCTTACATTCTTTACGAAGTA---------------TTT------TTC---GGCGAGGCGAGTAAAGTTAATAAACAG------TCC---GCACCGCCTCAGGTC---CAG---TCA---GCC---TTC---GTG---ACTATG---CGTTGGATCGTCACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TKVSG-GI------------FWR-LLIGTVVMLVGGYLGE---A------G--Y-----------M----------------------NS------YLA-FTIGIVGWAYILYEV-----F--F-GEASKVNKQ--S-APPQV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta2-a]_KJ928816 [III-Beta2-a] PRGD_OTU054_96069328745020e163e6d16bd15fae68 gb|KJ928816| PRGD_OTU054_96069328745020e163e6d16bd15fae68, putative proteorhodopsin gene, partial cds. PRGD_OTU054_96069328745020e163e6d16bd15fae68, putative proteorhodopsin gene, partial cds. KJ928816 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 2/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; ; 67.49, -168.12), English Channel (48.7717, -3.9683) TTGATTACTGTCCCGCTGTTGATGATTGAGTTCTATCTGATTCTTAGAGCGATTACGAAGGTCTCTGGCGGCATCTTTTGGCGACTGTTGATCGGCACAGTTGTGATGCTTGTTGGTGGGTACTTAGGTGAAGCTGGCTACATGAACTTGTATTTAGCATTCACGATCGGGATCGTGGGCTGGGCTTACATTCTTTACGAAGTATTTTTCGGCGAGGCGAGTAAAGTTAATAAACAGTCTGCACCGCCTCAGGTCCAGTCAGCCTTCGTGACTATGCGTTGGATCGTCACTATT LITVPLLMIEFYLILRAITKVSGGIFWRLLIGTVVMLVGGYLGEAGYMNLYLAFTIGIVGWAYILYEVFFGEASKVNKQSAPPQVQSAFVTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTCCCGCTGTTGATGATTGAGTTCTATCTGATTCTTAGAGCG---------ATT---ACGAAGGTCTCTGGC---GGCATC------------------------------------TTTTGGCGA---CTGTTGATCGGCACAGTTGTGATGCTTGTTGGTGGGTACTTAGGTGAA---------GCT------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AACTTG------------------TATTTAGCA---TTCACGATCGGGATCGTGGGCTGGGCTTACATTCTTTACGAAGTA---------------TTT------TTC---GGCGAGGCGAGTAAAGTTAATAAACAG------TCT---GCACCGCCTCAGGTC---CAG---TCA---GCC---TTC---GTG---ACTATG---CGTTGGATCGTCACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TKVSG-GI------------FWR-LLIGTVVMLVGGYLGE---A------G--Y-----------M----------------------NL------YLA-FTIGIVGWAYILYEV-----F--F-GEASKVNKQ--S-APPQV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta2-a]_KJ928807 [III-Beta2-a] PRGD_OTU054_0bc658773a53fc2feae6a4e98aaac430 gb|KJ928807| PRGD_OTU054_0bc658773a53fc2feae6a4e98aaac430, putative proteorhodopsin gene, partial cds. PRGD_OTU054_0bc658773a53fc2feae6a4e98aaac430, putative proteorhodopsin gene, partial cds. KJ928807 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 2/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781) TTGATTACTGTCCCGCTGTTGATGATTGAGTTCTATCTGATTCTCAGAGCGATTACGAAGGTCTCTGGCGGCATCTTTTGGCGACTGTTGATTGGTACAGTTGTGATGCTTGTTGGCGGATACTTAGGTGAAGCTGGCTACATGAATTCGTATTTAGCATTCACGATCGGGATCGTGGGCTGGGCGTACATCCTTTACGAAGTATTTTTCGGCGAGGCGAGTAAAGTTAATAAACAGTCCGCACCGCCTCAGGTCCAGTCAGCCTTCGTGACTATGCGTTGGATCGTTACTATT LITVPLLMIEFYLILRAITKVSGGIFWRLLIGTVVMLVGGYLGEAGYMNSYLAFTIGIVGWAYILYEVFFGEASKVNKQSAPPQVQSAFVTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTCCCGCTGTTGATGATTGAGTTCTATCTGATTCTCAGAGCG---------ATT---ACGAAGGTCTCTGGC---GGCATC------------------------------------TTTTGGCGA---CTGTTGATTGGTACAGTTGTGATGCTTGTTGGCGGATACTTAGGTGAA---------GCT------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AATTCG------------------TATTTAGCA---TTCACGATCGGGATCGTGGGCTGGGCGTACATCCTTTACGAAGTA---------------TTT------TTC---GGCGAGGCGAGTAAAGTTAATAAACAG------TCC---GCACCGCCTCAGGTC---CAG---TCA---GCC---TTC---GTG---ACTATG---CGTTGGATCGTTACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TKVSG-GI------------FWR-LLIGTVVMLVGGYLGE---A------G--Y-----------M----------------------NS------YLA-FTIGIVGWAYILYEV-----F--F-GEASKVNKQ--S-APPQV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta2-a]_KJ928811 [III-Beta2-a] PRGD_OTU054_442a2b7c746a785f7db0c9881690bd0e gb|KJ928811| PRGD_OTU054_442a2b7c746a785f7db0c9881690bd0e, putative proteorhodopsin gene, partial cds. PRGD_OTU054_442a2b7c746a785f7db0c9881690bd0e, putative proteorhodopsin gene, partial cds. KJ928811 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 2/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175) CTGATCACTGTACCGCTGCTGATGATTGAGTTTTATCTAATCCTCAGAGCGATTACGAATGTATCTGGTGGCATCTTTTGGCGACTGTTGATTGGCACAGTTGTGATGCTTGTTGGCGGATACCTAGGTGAAGCGAACTACATGAATGCGTACTTGGCATTCGCAATCGGCATCGCAGGCTGGGCCTACATCCTTTACGAAATATTCTTCGGCGAAGCGAGTAGGGTAAATAAGCAGTCTGCGCCGCCTCAGGTCCAGTCGGCGTTCTCTACTATGCGTTGGATCGTTACTATT LITVPLLMIEFYLILRAITNVSGGIFWRLLIGTVVMLVGGYLGEANYMNAYLAFAIGIAGWAYILYEIFFGEASRVNKQSAPPQVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTACCGCTGCTGATGATTGAGTTTTATCTAATCCTCAGAGCG---------ATT---ACGAATGTATCTGGT---GGCATC------------------------------------TTTTGGCGA---CTGTTGATTGGCACAGTTGTGATGCTTGTTGGCGGATACCTAGGTGAA---------GCG------------------AAC------TAC---------------------------------ATG------------------------------------------------------------------AATGCG------------------TACTTGGCA---TTCGCAATCGGCATCGCAGGCTGGGCCTACATCCTTTACGAAATA---------------TTC------TTC---GGCGAAGCGAGTAGGGTAAATAAGCAG------TCT---GCGCCGCCTCAGGTC---CAG---TCG---GCG---TTC---TCT---ACTATG---CGTTGGATCGTTACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GI------------FWR-LLIGTVVMLVGGYLGE---A------N--Y-----------M----------------------NA------YLA-FAIGIAGWAYILYEI-----F--F-GEASRVNKQ--S-APPQV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta2-a]_KJ928809 [III-Beta2-a] PRGD_OTU054_2cd317a5075406273ecee18f1fc79a86 gb|KJ928809| PRGD_OTU054_2cd317a5075406273ecee18f1fc79a86, putative proteorhodopsin gene, partial cds. PRGD_OTU054_2cd317a5075406273ecee18f1fc79a86, putative proteorhodopsin gene, partial cds. KJ928809 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 2/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683) CTGATCACTGTCCCGCTGCTGATGATTGAGTTCTACCTGATCCTCAAAGCAATTACGAATGTCTCTGGTGGCATCTTTTGGCGACTATTGATCGGTACAGTCGTAATGCTTGTTGGTGGATACCTGGGTGAAGCTAACTACATTAATTCGTACTTGGGATTTGCGATCGGCATGGCCGGCTGGGCTTACATCCTCTACGAGATATTTTTCGGTGAGGCGAGTAGAGTTAACAAGGAGTCTGCGCCGCCTCAGGTCCAATCAGCGTTCGCTACTATGCGATGGATCGTGACTATT LITVPLLMIEFYLILKAITNVSGGIFWRLLIGTVVMLVGGYLGEANYINSYLGFAIGMAGWAYILYEIFFGEASRVNKESAPPQVQSAFATMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTCCCGCTGCTGATGATTGAGTTCTACCTGATCCTCAAAGCA---------ATT---ACGAATGTCTCTGGT---GGCATC------------------------------------TTTTGGCGA---CTATTGATCGGTACAGTCGTAATGCTTGTTGGTGGATACCTGGGTGAA---------GCT------------------AAC------TAC---------------------------------ATT------------------------------------------------------------------AATTCG------------------TACTTGGGA---TTTGCGATCGGCATGGCCGGCTGGGCTTACATCCTCTACGAGATA---------------TTT------TTC---GGTGAGGCGAGTAGAGTTAACAAGGAG------TCT---GCGCCGCCTCAGGTC---CAA---TCA---GCG---TTC---GCT---ACTATG---CGATGGATCGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILKA---I-TNVSG-GI------------FWR-LLIGTVVMLVGGYLGE---A------N--Y-----------I----------------------NS------YLG-FAIGMAGWAYILYEI-----F--F-GEASRVNKE--S-APPQV-Q-S-A-F-A-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta2-a]_KJ928821 [III-Beta2-a] PRGD_OTU054_fff3693de3c645ddec693643b9992677 gb|KJ928821| PRGD_OTU054_fff3693de3c645ddec693643b9992677, putative proteorhodopsin gene, partial cds. PRGD_OTU054_fff3693de3c645ddec693643b9992677, putative proteorhodopsin gene, partial cds. KJ928821 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 2/A subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683) CTGATCACTGTCCCGCTGCTGATGATTGAGTTCTATCTGATCCTCAAAGCAATTACGAATGTCTCTGGTGGTATCTTTTGGCGACTATTGATCGGTACAGTCGTAATGCTTGTTGGTGGATACCTGGGTGAAGCTAACTACATTAATTCGTACTTGGGATTTGCGATCGGCATGGCCGGCTGGGCTTACATCCTCTACGAGATATTTTTCGGTGAGGCGAGTAGAGTTAACAAGGAGTCTGCGCCGCCTCAGGTCCAATCAGCGTTCGCTACTATGCGATGGATCGTGACTATT LITVPLLMIEFYLILKAITNVSGGIFWRLLIGTVVMLVGGYLGEANYINSYLGFAIGMAGWAYILYEIFFGEASRVNKESAPPQVQSAFATMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTCCCGCTGCTGATGATTGAGTTCTATCTGATCCTCAAAGCA---------ATT---ACGAATGTCTCTGGT---GGTATC------------------------------------TTTTGGCGA---CTATTGATCGGTACAGTCGTAATGCTTGTTGGTGGATACCTGGGTGAA---------GCT------------------AAC------TAC---------------------------------ATT------------------------------------------------------------------AATTCG------------------TACTTGGGA---TTTGCGATCGGCATGGCCGGCTGGGCTTACATCCTCTACGAGATA---------------TTT------TTC---GGTGAGGCGAGTAGAGTTAACAAGGAG------TCT---GCGCCGCCTCAGGTC---CAA---TCA---GCG---TTC---GCT---ACTATG---CGATGGATCGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILKA---I-TNVSG-GI------------FWR-LLIGTVVMLVGGYLGE---A------N--Y-----------I----------------------NS------YLG-FAIGMAGWAYILYEI-----F--F-GEASRVNKE--S-APPQV-Q-S-A-F-A-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta2-MOLA814]_KJ929582 [III-Beta2-MOLA814] PRGD_OTU159_otuREP_367df1fdf778b62c26b72b8bcb291d77 gb|KJ929582| PRGD_OTU159_otuREP_367df1fdf778b62c26b72b8bcb291d77, putative proteorhodopsin gene, partial cds. PRGD_OTU159_otuREP_367df1fdf778b62c26b72b8bcb291d77, putative proteorhodopsin gene, partial cds. KJ929582 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 2/MOLA814-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 2 MOLA814-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTCATTACGGTCCCACTGTTGATGATTGAGTTCTACTTGATCTTGTCAGCTATTACCAAAGTATCAGTCGGCATCTTTTGGCGCCTAATGGTAGGTACCTTGGTGATGTTGGTTGGCGGCTATCTGGGTGAGGCTGGCTACATGGACGTTACCGTGGCCTTCATCATTGGTATGGCTGGCTGGGCATACATTTTGTACGAAATCTTTGCAGGCGAAGCCAGCAAAGTCAGTGCACAAAGCGCACCCCCATCAGTTCAGTCTGCATTCAACACCATGCGTTGGATTGTGACCATC LITVPLLMIEFYLILSAITKVSVGIFWRLMVGTLVMLVGGYLGEAGYMDVTVAFIIGMAGWAYILYEIFAGEASKVSAQSAPPSVQSAFNTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATTACGGTCCCACTGTTGATGATTGAGTTCTACTTGATCTTGTCAGCT---------ATT---ACCAAAGTATCAGTC---GGCATC------------------------------------TTTTGGCGC---CTAATGGTAGGTACCTTGGTGATGTTGGTTGGCGGCTATCTGGGTGAG---------GCT------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GACGTT------------------ACCGTGGCC---TTCATCATTGGTATGGCTGGCTGGGCATACATTTTGTACGAAATC---------------TTT------GCA---GGCGAAGCCAGCAAAGTCAGTGCACAA------AGC---GCACCCCCATCAGTT---CAG---TCT---GCA---TTC---AAC---ACCATG---CGTTGGATTGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILSA---I-TKVSV-GI------------FWR-LMVGTLVMLVGGYLGE---A------G--Y-----------M----------------------DV------TVA-FIIGMAGWAYILYEI-----F--A-GEASKVSAQ--S-APPSV-Q-S-A-F-N-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta2-MOLA814]_KJ929766 [III-Beta2-MOLA814] PRGD_OTU235a_otuREP_6b10beccc08999c3fb1c361ce4ca46f8 gb|KJ929766| PRGD_OTU235a_otuREP_6b10beccc08999c3fb1c361ce4ca46f8, putative proteorhodopsin gene, partial cds. PRGD_OTU235a_otuREP_6b10beccc08999c3fb1c361ce4ca46f8, putative proteorhodopsin gene, partial cds. KJ929766 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 2/MOLA814-like subcluster]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 2 MOLA814-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATCACTGTTCCGCTTCTGATGATCGAGTTCTACTTGATCTTGCGTGCGATTACCAAAGTATCAGCTGGCATTTTCTGGCGTCTATTAATTGGTTCACTTGTGATGCTGGTTGGTGGCTATCTTGGTGAAGCCGGATATCTGGGCGACGGTTCTGGTGGCCTTTGGTTCGGTTTCATCATCGGGATGGCGGGCTGGGCCTATATTCTGTATGAAATTTTCGCTGGCGAAGCTGGCAAAGTCTCAGCAGAACAGGCACCCGAGTCAGTCAAGTCTGCATTCTCTACAATGCGCTGGATTGTAACCATT LITVPLLMIEFYLILRAITKVSAGIFWRLLIGSLVMLVGGYLGEAGYLGDGSGGLWFGFIIGMAGWAYILYEIFAGEAGKVSAEQAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTTCCGCTTCTGATGATCGAGTTCTACTTGATCTTGCGTGCG---------ATT---ACCAAAGTATCAGCT---GGCATT------------------------------------TTCTGGCGT---CTATTAATTGGTTCACTTGTGATGCTGGTTGGTGGCTATCTTGGTGAA---------GCC------------------GGA------TAT---------------------------------CTG------------GGC---GACGGT---------TCT---------------------------GGTGGCCTT------------------TGGTTCGGT---TTCATCATCGGGATGGCGGGCTGGGCCTATATTCTGTATGAAATT---------------TTC------GCT---GGCGAAGCTGGCAAAGTCTCAGCAGAA------CAG---GCACCCGAGTCAGTC---AAG---TCT---GCA---TTC---TCT---ACAATG---CGCTGGATTGTAACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TKVSA-GI------------FWR-LLIGSLVMLVGGYLGE---A------G--Y-----------L----G-DG---S---------GGL------WFG-FIIGMAGWAYILYEI-----F--A-GEAGKVSAE--Q-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Beta2]_KJ929767 [III-Beta2] PRGD_OTU235b_otuREP_182d482113e4f0481b962a5c9247ceb2 gb|KJ929767| PRGD_OTU235b_otuREP_182d482113e4f0481b962a5c9247ceb2, putative proteorhodopsin gene, partial cds. PRGD_OTU235b_otuREP_182d482113e4f0481b962a5c9247ceb2, putative proteorhodopsin gene, partial cds. KJ929767 [[proteorhodopsin super-cluster III/Betaproteobacterial-like cluster 2]] proteorhodopsin super-cluster III Betaproteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACAGTGCCACTACTGATGGTTGAATTCTACTTGATCCTTCGTGCGATCACCAAAGTATCTGGCGGCATTTTCTGGCGCTTGATGATTGGTACATTGGTCATGTTGGTCGGTGGTTATCTTGGTGAAGCTGGTTACATTGGTGTTACTCTTGCTTTCATCATTGGTATGGCTGGTTGGGCATACATTCTCTATGAAATCTTTGCTGGTGAAGCCGGCAAGTTGAATGCCAACGAAGCCCCAGAATCAGTCAAGTCTGCGTTCTCAACCATGCGTTGGATCGTGACCATT LITVPLLMVEFYLILRAITKVSGGIFWRLMIGTLVMLVGGYLGEAGYIGVTLAFIIGMAGWAYILYEIFAGEAGKLNANEAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCACTACTGATGGTTGAATTCTACTTGATCCTTCGTGCG---------ATC---ACCAAAGTATCTGGC---GGCATT------------------------------------TTCTGGCGC---TTGATGATTGGTACATTGGTCATGTTGGTCGGTGGTTATCTTGGTGAA---------GCT------------------GGT------TAC---------------------------------ATT------------------------------------------------------------------GGTGTT------------------ACTCTTGCT---TTCATCATTGGTATGGCTGGTTGGGCATACATTCTCTATGAAATC---------------TTT------GCT---GGTGAAGCCGGCAAGTTGAATGCCAAC------GAA---GCCCCAGAATCAGTC---AAG---TCT---GCG---TTC---TCA---ACCATG---CGTTGGATCGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TKVSG-GI------------FWR-LMIGTLVMLVGGYLGE---A------G--Y-----------I----------------------GV------TLA-FIIGMAGWAYILYEI-----F--A-GEAGKLNAN--E-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha5-IMCC14465]_KJ929112 [III-Alpha5-IMCC14465] PRGD_OTU076_f0ab583198de67957ac8af79bd7506f1 gb|KJ929112| PRGD_OTU076_f0ab583198de67957ac8af79bd7506f1, putative proteorhodopsin gene, partial cds. PRGD_OTU076_f0ab583198de67957ac8af79bd7506f1, putative proteorhodopsin gene, partial cds. KJ929112 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 5/IMCC14465-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 5 IMCC14465-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -33.9602, -73.3769), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTGATTACTGTGCCGCTCTTGATGGTGGAATTCTTCCTCATCTTGTCGGCCATCACCGCTGTTCCGGCGCGCGTCTTCTGGCGTCTGCTTATCGGTACAACGCTGATGCTGGTATTCGGTTATCTGGGCGAAGCCGGTTACATGGATGTGACCGCAGGCTTTGTGCTGGGCACCGCGGCTTGGTTGTATGTTCTTTATGAAATCTTCCGTGGTGAAGCCGGTCAGTTGAATGCCGAGAATGCCAGCCCTGCTGTGCAATCCGCTTTCAGCCTGATGCGCTACATTGTGACTTTC LITVPLLMVEFFLILSAITAVPARVFWRLLIGTTLMLVFGYLGEAGYMDVTAGFVLGTAAWLYVLYEIFRGEAGQLNAENASPAVQSAFSLMRYIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTGCCGCTCTTGATGGTGGAATTCTTCCTCATCTTGTCGGCC---------ATC---ACCGCTGTTCCGGCG---CGCGTC------------------------------------TTCTGGCGT---CTGCTTATCGGTACAACGCTGATGCTGGTATTCGGTTATCTGGGCGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GATGTG------------------ACCGCAGGC---TTTGTGCTGGGCACCGCGGCTTGGTTGTATGTTCTTTATGAAATC---------------TTC------CGT---GGTGAAGCCGGTCAGTTGAATGCCGAG------AAT---GCCAGCCCTGCTGTG---CAA---TCC---GCT---TTC---AGC---CTGATG---CGCTACATTGTGACTTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFFLILSA---I-TAVPA-RV------------FWR-LLIGTTLMLVFGYLGE---A------G--Y-----------M----------------------DV------TAG-FVLGTAAWLYVLYEI-----F--R-GEAGQLNAE--N-ASPAV-Q-S-A-F-S-LM-RYIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha5-IMCC14465]_KJ929107 [III-Alpha5-IMCC14465] PRGD_OTU076_6796cbdff983460e532c989f8afd3f25 gb|KJ929107| PRGD_OTU076_6796cbdff983460e532c989f8afd3f25, putative proteorhodopsin gene, partial cds. PRGD_OTU076_6796cbdff983460e532c989f8afd3f25, putative proteorhodopsin gene, partial cds. KJ929107 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 5/IMCC14465-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 5 IMCC14465-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683) CTGATTACCGTGCCGTTGCTTATGGTGGAATTCTTCCTCATCTTGTCGGCCATCACCGCTGTTCCGGCGCGCGTCTTCTGGCGTCTGCTTATCGGTACAACACTGATGCTGGTTTTCGGTTATCTGGGCGAAGCCGGTTACATGGATGTGACCGCGGGCTTTGTTTTGGGAACCGCAGCTTGGTTGTATGTTCTTTATGAAATCTTCCGTGGTGAAGCCGGTCAGTTGAATGCTGAGAATGCCAGCCCTGCTGTGCAGTCCGCTTTCAGCCTGATGCGCTACATTGTGACATTC LITVPLLMVEFFLILSAITAVPARVFWRLLIGTTLMLVFGYLGEAGYMDVTAGFVLGTAAWLYVLYEIFRGEAGQLNAENASPAVQSAFSLMRYIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACCGTGCCGTTGCTTATGGTGGAATTCTTCCTCATCTTGTCGGCC---------ATC---ACCGCTGTTCCGGCG---CGCGTC------------------------------------TTCTGGCGT---CTGCTTATCGGTACAACACTGATGCTGGTTTTCGGTTATCTGGGCGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GATGTG------------------ACCGCGGGC---TTTGTTTTGGGAACCGCAGCTTGGTTGTATGTTCTTTATGAAATC---------------TTC------CGT---GGTGAAGCCGGTCAGTTGAATGCTGAG------AAT---GCCAGCCCTGCTGTG---CAG---TCC---GCT---TTC---AGC---CTGATG---CGCTACATTGTGACATTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFFLILSA---I-TAVPA-RV------------FWR-LLIGTTLMLVFGYLGE---A------G--Y-----------M----------------------DV------TAG-FVLGTAAWLYVLYEI-----F--R-GEAGQLNAE--N-ASPAV-Q-S-A-F-S-LM-RYIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha5-IMCC14465]_KJ929105 [III-Alpha5-IMCC14465] PRGD_OTU076_164915aeb9f4b2b2a9a3797bcd580d1c gb|KJ929105| PRGD_OTU076_164915aeb9f4b2b2a9a3797bcd580d1c, putative proteorhodopsin gene, partial cds. PRGD_OTU076_164915aeb9f4b2b2a9a3797bcd580d1c, putative proteorhodopsin gene, partial cds. KJ929105 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 5/IMCC14465-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 5 IMCC14465-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATTACGGTGCCGCTGCTGATGGTTGAGTTTTTCCTCATCTTGTCAGCCATCACCTCCGTTCCGGCGCGTGTTTTCTGGCGCCTGCTGATTGGTACGACGCTGATGCTGGTCTTCGGTTATCTGGGTGAAGCCGGTTACATGGATGTAACTGCTGGCTTTGTTCTGGGTACCGCAGCTTGGATATACGTGTTGTATGAAATCTTCCGTGGCGAGGCCGGTCAGCTCAATGCTGAAAATGCCAGCCCTGCCGTGCAGTCAGCCTTTAGCCTGATGCGGTATATTGTGACTTTC LITVPLLMVEFFLILSAITSVPARVFWRLLIGTTLMLVFGYLGEAGYMDVTAGFVLGTAAWIYVLYEIFRGEAGQLNAENASPAVQSAFSLMRYIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACGGTGCCGCTGCTGATGGTTGAGTTTTTCCTCATCTTGTCAGCC---------ATC---ACCTCCGTTCCGGCG---CGTGTT------------------------------------TTCTGGCGC---CTGCTGATTGGTACGACGCTGATGCTGGTCTTCGGTTATCTGGGTGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GATGTA------------------ACTGCTGGC---TTTGTTCTGGGTACCGCAGCTTGGATATACGTGTTGTATGAAATC---------------TTC------CGT---GGCGAGGCCGGTCAGCTCAATGCTGAA------AAT---GCCAGCCCTGCCGTG---CAG---TCA---GCC---TTT---AGC---CTGATG---CGGTATATTGTGACTTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFFLILSA---I-TSVPA-RV------------FWR-LLIGTTLMLVFGYLGE---A------G--Y-----------M----------------------DV------TAG-FVLGTAAWIYVLYEI-----F--R-GEAGQLNAE--N-ASPAV-Q-S-A-F-S-LM-RYIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha5-IMCC14465]_KJ929109 [III-Alpha5-IMCC14465] PRGD_OTU076_a116d69564b7255e4fb4506d94fe9d43 gb|KJ929109| PRGD_OTU076_a116d69564b7255e4fb4506d94fe9d43, putative proteorhodopsin gene, partial cds. PRGD_OTU076_a116d69564b7255e4fb4506d94fe9d43, putative proteorhodopsin gene, partial cds. KJ929109 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 5/IMCC14465-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 5 IMCC14465-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683) CTGATTACTGTGCCGCTGCTGATGGTTGAGTTTTTCCTCATCTTGTCAGCCATCACCGCCGTTCCGGCGCGTGTGTTCTGGAAGCTGCTCATCGGTACAACGCTGATGCTGGTTTTCGGTTATCTCGGCGAAGCAGGCTACATGGATGTAACCGCAGGCTTCATTCTGGGCACGGCGGCTTGGTTCTATGTGCTGTATGAAATCTTCCGTGGCGAGGCCGGTCAGCTAAATGCTGAGAATGCCAGCCCGGCAGTGAAATCAGCATTTAACCTGATGCGGAACATTGTGACCTTT LITVPLLMVEFFLILSAITAVPARVFWKLLIGTTLMLVFGYLGEAGYMDVTAGFILGTAAWFYVLYEIFRGEAGQLNAENASPAVKSAFNLMRNIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTGCCGCTGCTGATGGTTGAGTTTTTCCTCATCTTGTCAGCC---------ATC---ACCGCCGTTCCGGCG---CGTGTG------------------------------------TTCTGGAAG---CTGCTCATCGGTACAACGCTGATGCTGGTTTTCGGTTATCTCGGCGAA---------GCA------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GATGTA------------------ACCGCAGGC---TTCATTCTGGGCACGGCGGCTTGGTTCTATGTGCTGTATGAAATC---------------TTC------CGT---GGCGAGGCCGGTCAGCTAAATGCTGAG------AAT---GCCAGCCCGGCAGTG---AAA---TCA---GCA---TTT---AAC---CTGATG---CGGAACATTGTGACCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFFLILSA---I-TAVPA-RV------------FWK-LLIGTTLMLVFGYLGE---A------G--Y-----------M----------------------DV------TAG-FILGTAAWFYVLYEI-----F--R-GEAGQLNAE--N-ASPAV-K-S-A-F-N-LM-RNIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha5-IMCC14465]_KJ929111 [III-Alpha5-IMCC14465] PRGD_OTU076_d41f4c6ab71c0176c59cac9ce14e0100 gb|KJ929111| PRGD_OTU076_d41f4c6ab71c0176c59cac9ce14e0100, putative proteorhodopsin gene, partial cds. PRGD_OTU076_d41f4c6ab71c0176c59cac9ce14e0100, putative proteorhodopsin gene, partial cds. KJ929111 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 5/IMCC14465-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 5 IMCC14465-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATCACAGTACCGCTTTTGATGGTGGAATTCTTCCTCATCTTGTCAGCGATCACAGCTGTTCCGGCACGTGTTTTCTGGAAACTGCTCATTGGTACTACGGCAATGTTGGTATTCGGTTATCTTGGCGAAGCAGGCTATATGGACGTAACTGCCGGTTTCGTTCTTGGGACCGCGGCCTGGATATATGTACTGTATGAAATCTTCAAAGGGGAAGCAGGACAGCTTAATGCTGAAAATGCAAGCCCTGCAGTACAATCCGCTTTCAACCTGATGCGTAACATTGTGACCTTC LITVPLLMVEFFLILSAITAVPARVFWKLLIGTTAMLVFGYLGEAGYMDVTAGFVLGTAAWIYVLYEIFKGEAGQLNAENASPAVQSAFNLMRNIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACAGTACCGCTTTTGATGGTGGAATTCTTCCTCATCTTGTCAGCG---------ATC---ACAGCTGTTCCGGCA---CGTGTT------------------------------------TTCTGGAAA---CTGCTCATTGGTACTACGGCAATGTTGGTATTCGGTTATCTTGGCGAA---------GCA------------------GGC------TAT---------------------------------ATG------------------------------------------------------------------GACGTA------------------ACTGCCGGT---TTCGTTCTTGGGACCGCGGCCTGGATATATGTACTGTATGAAATC---------------TTC------AAA---GGGGAAGCAGGACAGCTTAATGCTGAA------AAT---GCAAGCCCTGCAGTA---CAA---TCC---GCT---TTC---AAC---CTGATG---CGTAACATTGTGACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFFLILSA---I-TAVPA-RV------------FWK-LLIGTTAMLVFGYLGE---A------G--Y-----------M----------------------DV------TAG-FVLGTAAWIYVLYEI-----F--K-GEAGQLNAE--N-ASPAV-Q-S-A-F-N-LM-RNIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha5-IMCC14465]_KJ929106 [III-Alpha5-IMCC14465] PRGD_OTU076_56fb97089dc1c0b48793a672a5b717ab gb|KJ929106| PRGD_OTU076_56fb97089dc1c0b48793a672a5b717ab, putative proteorhodopsin gene, partial cds. PRGD_OTU076_56fb97089dc1c0b48793a672a5b717ab, putative proteorhodopsin gene, partial cds. KJ929106 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 5/IMCC14465-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 5 IMCC14465-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) CTCATCACAGTGCCACTGCTGATGGTGGAATTCTTCCTCATCTTGTCAGCGATCACAGCCGTTCCAGCACGTATTTTCTGGAAGCTGCTTATCGGTACAACGCTGATGCTGGTTTTCGGGTATCTCGGCGAGGCAGGTTACATGGACGTTACTGCTGGTTTCGTTCTTGGAATGGCAGCTTGGATATACGTACTGTATGAAATCTTCAAAGGCGAAGCGGGGCAACTTAGCGCCGAAAATGCCAGTCCAGCGGTCCAATCTGCTTTCAACCTGATGCGTAACATTGTTACTTTC LITVPLLMVEFFLILSAITAVPARIFWKLLIGTTLMLVFGYLGEAGYMDVTAGFVLGMAAWIYVLYEIFKGEAGQLSAENASPAVQSAFNLMRNIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTGCCACTGCTGATGGTGGAATTCTTCCTCATCTTGTCAGCG---------ATC---ACAGCCGTTCCAGCA---CGTATT------------------------------------TTCTGGAAG---CTGCTTATCGGTACAACGCTGATGCTGGTTTTCGGGTATCTCGGCGAG---------GCA------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GACGTT------------------ACTGCTGGT---TTCGTTCTTGGAATGGCAGCTTGGATATACGTACTGTATGAAATC---------------TTC------AAA---GGCGAAGCGGGGCAACTTAGCGCCGAA------AAT---GCCAGTCCAGCGGTC---CAA---TCT---GCT---TTC---AAC---CTGATG---CGTAACATTGTTACTTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFFLILSA---I-TAVPA-RI------------FWK-LLIGTTLMLVFGYLGE---A------G--Y-----------M----------------------DV------TAG-FVLGMAAWIYVLYEI-----F--K-GEAGQLSAE--N-ASPAV-Q-S-A-F-N-LM-RNIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha5-IMCC14465]_KJ929110 [III-Alpha5-IMCC14465] PRGD_OTU076_aebaf38959cec2da5064191cf8defb8e gb|KJ929110| PRGD_OTU076_aebaf38959cec2da5064191cf8defb8e, putative proteorhodopsin gene, partial cds. PRGD_OTU076_aebaf38959cec2da5064191cf8defb8e, putative proteorhodopsin gene, partial cds. KJ929110 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 5/IMCC14465-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 5 IMCC14465-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Indian Ocean (-33.28, 45.35) CTCATCACCGTGCCGCTGCTTATGGTTGAGTTCTTCCTCATCCTGTCAGCCATCACCAAAGTGCCGGTCGGCGTCTTCTGGCGTCTGCTCGTCGGCACCACGCTGATGCTGGTCTTCGGTTACCTCGGTGAAGCCGGTTACATGAATGTAACTGCCGGTTTCGTTCTGGGTACGGCCGCATGGTTGTATGTGCTGTATGAAATCTTCCGTGGCGAAGCCAGCAAGCTGAGCGCGGAAAATGCCAGCCCGGCCGTACAGTCCGCCTTCAACCTGATGCGTAACATTGTTACCTTC LITVPLLMVEFFLILSAITKVPVGVFWRLLVGTTLMLVFGYLGEAGYMNVTAGFVLGTAAWLYVLYEIFRGEASKLSAENASPAVQSAFNLMRNIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACCGTGCCGCTGCTTATGGTTGAGTTCTTCCTCATCCTGTCAGCC---------ATC---ACCAAAGTGCCGGTC---GGCGTC------------------------------------TTCTGGCGT---CTGCTCGTCGGCACCACGCTGATGCTGGTCTTCGGTTACCTCGGTGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTGCCGGT---TTCGTTCTGGGTACGGCCGCATGGTTGTATGTGCTGTATGAAATC---------------TTC------CGT---GGCGAAGCCAGCAAGCTGAGCGCGGAA------AAT---GCCAGCCCGGCCGTA---CAG---TCC---GCC---TTC---AAC---CTGATG---CGTAACATTGTTACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFFLILSA---I-TKVPV-GV------------FWR-LLVGTTLMLVFGYLGE---A------G--Y-----------M----------------------NV------TAG-FVLGTAAWLYVLYEI-----F--R-GEASKLSAE--N-ASPAV-Q-S-A-F-N-LM-RNIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha5-IMCC14465]_KJ929113 [III-Alpha5-IMCC14465] PRGD_OTU076_f18fc7f5d595b60e5945cbc4bb985c89 gb|KJ929113| PRGD_OTU076_f18fc7f5d595b60e5945cbc4bb985c89, putative proteorhodopsin gene, partial cds. PRGD_OTU076_f18fc7f5d595b60e5945cbc4bb985c89, putative proteorhodopsin gene, partial cds. KJ929113 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 5/IMCC14465-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 5 IMCC14465-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.935, 18.508), Indian Ocean (-35.05, 23.73) CTCATCACCGTGCCGCTGCTGATGGTTGAGTTCTTCCTCATCCTGTCAGCCATCACGAAAGTGCCGGCCGGCGTCTTCTGGCGTCTGCTCGTCGGTACAACGCTGATGCTGGTATTCGGTTACCTCGGCGAAGCAGGTTACATGAATGTAACTGCCGGTTTCGTTCTGGGTACGATTGCTTGGCTGTATGTCCTTTGGGAAATCTTCAAAGGCGAAGCCGGTCAACTGAATGCTGAAAATGCCAGCCCGGCTGTGCAGTCAGCATTTAACCTGATGCGTAACATTGTGACCTTC LITVPLLMVEFFLILSAITKVPAGVFWRLLVGTTLMLVFGYLGEAGYMNVTAGFVLGTIAWLYVLWEIFKGEAGQLNAENASPAVQSAFNLMRNIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACCGTGCCGCTGCTGATGGTTGAGTTCTTCCTCATCCTGTCAGCC---------ATC---ACGAAAGTGCCGGCC---GGCGTC------------------------------------TTCTGGCGT---CTGCTCGTCGGTACAACGCTGATGCTGGTATTCGGTTACCTCGGCGAA---------GCA------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTGCCGGT---TTCGTTCTGGGTACGATTGCTTGGCTGTATGTCCTTTGGGAAATC---------------TTC------AAA---GGCGAAGCCGGTCAACTGAATGCTGAA------AAT---GCCAGCCCGGCTGTG---CAG---TCA---GCA---TTT---AAC---CTGATG---CGTAACATTGTGACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFFLILSA---I-TKVPA-GV------------FWR-LLVGTTLMLVFGYLGE---A------G--Y-----------M----------------------NV------TAG-FVLGTIAWLYVLWEI-----F--K-GEAGQLNAE--N-ASPAV-Q-S-A-F-N-LM-RNIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha5-IMCC14465]_KJ929108 [III-Alpha5-IMCC14465] PRGD_OTU076_9f9e914474e05f29ad902b550a15f00b gb|KJ929108| PRGD_OTU076_9f9e914474e05f29ad902b550a15f00b, putative proteorhodopsin gene, partial cds. PRGD_OTU076_9f9e914474e05f29ad902b550a15f00b, putative proteorhodopsin gene, partial cds. KJ929108 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 5/IMCC14465-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 5 IMCC14465-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTGATTACCGTGCCATTGCTGATGGTTGAGTTCTTCCTCATCTTGTCGGCCATCACGAAAGTTCCGGCTGGCGTGTTCTGGCGTCTGCTGGTGGGTACAACTGTCATGCTGGTTTTCGGCTACCTCGGCGAAGCAGGTTACATGAATGTAACGCTTGGTTTCGTTATCGGTACCCTGGCTTGGTTCTATGTCCTTTATGAAATTTTCCTCGGCGAAGCCGGCCGTATCAATGCAGAAAATGCCAGCCCAGCTGTGCAGTCTGCCTTTAAAATGATGCGTAACATTGTGACCTTC LITVPLLMVEFFLILSAITKVPAGVFWRLLVGTTVMLVFGYLGEAGYMNVTLGFVIGTLAWFYVLYEIFLGEAGRINAENASPAVQSAFKMMRNIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACCGTGCCATTGCTGATGGTTGAGTTCTTCCTCATCTTGTCGGCC---------ATC---ACGAAAGTTCCGGCT---GGCGTG------------------------------------TTCTGGCGT---CTGCTGGTGGGTACAACTGTCATGCTGGTTTTCGGCTACCTCGGCGAA---------GCA------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTTGGT---TTCGTTATCGGTACCCTGGCTTGGTTCTATGTCCTTTATGAAATT---------------TTC------CTC---GGCGAAGCCGGCCGTATCAATGCAGAA------AAT---GCCAGCCCAGCTGTG---CAG---TCT---GCC---TTT---AAA---ATGATG---CGTAACATTGTGACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFFLILSA---I-TKVPA-GV------------FWR-LLVGTTVMLVFGYLGE---A------G--Y-----------M----------------------NV------TLG-FVIGTLAWFYVLYEI-----F--L-GEAGRINAE--N-ASPAV-Q-S-A-F-K-MM-RNIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha5-IMCC14465]_KJ929104 [III-Alpha5-IMCC14465] PRGD_OTU076_otuREP_e1f5177560ed1a4ba0e61f867c5e6c27 gb|KJ929104| PRGD_OTU076_otuREP_e1f5177560ed1a4ba0e61f867c5e6c27, putative proteorhodopsin gene, partial cds. PRGD_OTU076_otuREP_e1f5177560ed1a4ba0e61f867c5e6c27, putative proteorhodopsin gene, partial cds. KJ929104 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 5/IMCC14465-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 5 IMCC14465-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTGATTACGGTGCCATTGCTGATGGTTGAGTTTTTCCTCATCCTATCGGCCATCACCAAAGTTCCGGCTGGCGTGTTCTGGCGTCTCTTGGTCGGCACCACGGCCATGCTGGTATTCGGCTATCTCGGCGAAGCGGGTTACATGAATGTAACGCTTGGTTTTGTAATCGGTACAGCCGCTTGGTTCTATGTGTTGTATGAGATTTTCCTCGGCGAAGCCGGACGTATCAATGCAGAAAATGCCAGCCCTGCTGTGCAGTCTGCCTTTAAAATGATGCGCAACATTGTAACCTTC LITVPLLMVEFFLILSAITKVPAGVFWRLLVGTTAMLVFGYLGEAGYMNVTLGFVIGTAAWFYVLYEIFLGEAGRINAENASPAVQSAFKMMRNIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACGGTGCCATTGCTGATGGTTGAGTTTTTCCTCATCCTATCGGCC---------ATC---ACCAAAGTTCCGGCT---GGCGTG------------------------------------TTCTGGCGT---CTCTTGGTCGGCACCACGGCCATGCTGGTATTCGGCTATCTCGGCGAA---------GCG------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTTGGT---TTTGTAATCGGTACAGCCGCTTGGTTCTATGTGTTGTATGAGATT---------------TTC------CTC---GGCGAAGCCGGACGTATCAATGCAGAA------AAT---GCCAGCCCTGCTGTG---CAG---TCT---GCC---TTT---AAA---ATGATG---CGCAACATTGTAACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFFLILSA---I-TKVPA-GV------------FWR-LLVGTTAMLVFGYLGE---A------G--Y-----------M----------------------NV------TLG-FVIGTAAWFYVLYEI-----F--L-GEAGRINAE--N-ASPAV-Q-S-A-F-K-MM-RNIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha5-IMCC14465]_KJ929874 [III-Alpha5-IMCC14465] PRGD_OTU325_otuREP_55c2bb39807850dc7bd3680f2608e8c4 gb|KJ929874| PRGD_OTU325_otuREP_55c2bb39807850dc7bd3680f2608e8c4, putative proteorhodopsin gene, partial cds. PRGD_OTU325_otuREP_55c2bb39807850dc7bd3680f2608e8c4, putative proteorhodopsin gene, partial cds. KJ929874 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 5/IMCC14465-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 5 IMCC14465-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATTACTGTGCCGCTTCTGATGGTTGAGTTCTACCTCATCCTGGCTGCGATCACCAAAGTGCCAGCTGGCGTTTTCTGGCGCCTGATTATCGGCACCACTTTGATGCTGCTGTTCGGCTATCTCGGTGAAGCTAAATATATCTCATACACTGCAGGTTTTGTAATTGGTACCTTCTTCTGGTTGGTTGTGCTTTATGAAATCTTCAAAGGTGAAGCAAGCCGTATCAGTTCGAACGACGCCAGCCCTGCTGTGCAGTCCGCCTTTAAATTGATGCGTCTGATTGTAACCTTT LITVPLLMVEFYLILAAITKVPAGVFWRLIIGTTLMLLFGYLGEAKYISYTAGFVIGTFFWLVVLYEIFKGEASRISSNDASPAVQSAFKLMRLIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCGCTTCTGATGGTTGAGTTCTACCTCATCCTGGCTGCG---------ATC---ACCAAAGTGCCAGCT---GGCGTT------------------------------------TTCTGGCGC---CTGATTATCGGCACCACTTTGATGCTGCTGTTCGGCTATCTCGGTGAA---------GCT------------------AAA------TAT---------------------------------ATC------------------------------------------------------------------TCATAC------------------ACTGCAGGT---TTTGTAATTGGTACCTTCTTCTGGTTGGTTGTGCTTTATGAAATC---------------TTC------AAA---GGTGAAGCAAGCCGTATCAGTTCGAAC------GAC---GCCAGCCCTGCTGTG---CAG---TCC---GCC---TTT---AAA---TTGATG---CGTCTGATTGTAACCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILAA---I-TKVPA-GV------------FWR-LIIGTTLMLLFGYLGE---A------K--Y-----------I----------------------SY------TAG-FVIGTFFWLVVLYEI-----F--K-GEASRISSN--D-ASPAV-Q-S-A-F-K-LM-RLIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha5-IMCC14465]_KJ929875 [III-Alpha5-IMCC14465] PRGD_OTU326_otuREP_5d5bb27d596f66f0e3bd027a497fdaaf gb|KJ929875| PRGD_OTU326_otuREP_5d5bb27d596f66f0e3bd027a497fdaaf, putative proteorhodopsin gene, partial cds. PRGD_OTU326_otuREP_5d5bb27d596f66f0e3bd027a497fdaaf, putative proteorhodopsin gene, partial cds. KJ929875 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 5/IMCC14465-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 5 IMCC14465-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175) CTCATCACAGTTCCGCTGCTGATGGTCGAGTTCTTCCTGATCCTGTCTGCCATCACTGCGGTGCCGGCACGCATTTTCTGGAAACTCATTGGCGGTACAACAATTATGCTGGTATTCGGTTACCTCGGTGAAGCTGGCTACATGTCAGCCACTGTCGGTTTCGCTATCGGTATGGTCGCTTGGTTCTACGTCCTGTACGAAATCTTCTTGGGTGAAACCGGGAAAATCAGTGCAGAACAAGCCAGCCCGGCTGTGCAACAAGCTTTCAACCTGATGCGTTACATTGTGACCTTC LITVPLLMVEFFLILSAITAVPARIFWKLIGGTTIMLVFGYLGEAGYMSATVGFAIGMVAWFYVLYEIFLGETGKISAEQASPAVQQAFNLMRYIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTTCCGCTGCTGATGGTCGAGTTCTTCCTGATCCTGTCTGCC---------ATC---ACTGCGGTGCCGGCA---CGCATT------------------------------------TTCTGGAAA---CTCATTGGCGGTACAACAATTATGCTGGTATTCGGTTACCTCGGTGAA---------GCT------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------TCAGCC------------------ACTGTCGGT---TTCGCTATCGGTATGGTCGCTTGGTTCTACGTCCTGTACGAAATC---------------TTC------TTG---GGTGAAACCGGGAAAATCAGTGCAGAA------CAA---GCCAGCCCGGCTGTG---CAA---CAA---GCT---TTC---AAC---CTGATG---CGTTACATTGTGACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFFLILSA---I-TAVPA-RI------------FWK-LIGGTTIMLVFGYLGE---A------G--Y-----------M----------------------SA------TVG-FAIGMVAWFYVLYEI-----F--L-GETGKISAE--Q-ASPAV-Q-Q-A-F-N-LM-RYIVTF-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha5-IMCC14465]_KJ929746 [III-Alpha5-IMCC14465] PRGD_OTU225_otuREP_472940ebb757ed160be90cf03d38ca86 gb|KJ929746| PRGD_OTU225_otuREP_472940ebb757ed160be90cf03d38ca86, putative proteorhodopsin gene, partial cds. PRGD_OTU225_otuREP_472940ebb757ed160be90cf03d38ca86, putative proteorhodopsin gene, partial cds. KJ929746 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 5/IMCC14465-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 5 IMCC14465-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937), Arctic Ocean-Pacific side (72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTGCTGACTGTGCCGCTTCTGATGGTTGAGTTTTTCCTCATCCTCTCAGCGATCGCAAAAGTGCCTGCAGGTGTATTCTGGAGACTGCTTATCTTCACAACCTTGATGCTGGTCTTCGGTTATCTCGGAGAGTCCGGCAAAATGAATGTCATGGCCGGTTTTGTCCTTGGTATGATTGCATGGTTTGTGGTTCTGTATGAAATCTTCGCAGGTGAGGCCAGCAAAATTAGTGCTGAACAAGCCAGTGAAACTGTACAGAAAGCTTTCAACCTAATGCGTTGGATTGTGACAATC LLTVPLLMVEFFLILSAIAKVPAGVFWRLLIFTTLMLVFGYLGESGKMNVMAGFVLGMIAWFVVLYEIFAGEASKISAEQASETVQKAFNLMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTGACTGTGCCGCTTCTGATGGTTGAGTTTTTCCTCATCCTCTCAGCG---------ATC---GCAAAAGTGCCTGCA---GGTGTA------------------------------------TTCTGGAGA---CTGCTTATCTTCACAACCTTGATGCTGGTCTTCGGTTATCTCGGAGAG---------TCC------------------GGC------AAA---------------------------------ATG------------------------------------------------------------------AATGTC------------------ATGGCCGGT---TTTGTCCTTGGTATGATTGCATGGTTTGTGGTTCTGTATGAAATC---------------TTC------GCA---GGTGAGGCCAGCAAAATTAGTGCTGAA------CAA---GCCAGTGAAACTGTA---CAG---AAA---GCT---TTC---AAC---CTAATG---CGTTGGATTGTGACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFFLILSA---I-AKVPA-GV------------FWR-LLIFTTLMLVFGYLGE---S------G--K-----------M----------------------NV------MAG-FVLGMIAWFVVLYEI-----F--A-GEASKISAE--Q-ASETV-Q-K-A-F-N-LM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha5-IMCC14465]_KJ929747 [III-Alpha5-IMCC14465] PRGD_OTU225_6118a0739b012e00f1f85f224d13c2e4 gb|KJ929747| PRGD_OTU225_6118a0739b012e00f1f85f224d13c2e4, putative proteorhodopsin gene, partial cds. PRGD_OTU225_6118a0739b012e00f1f85f224d13c2e4, putative proteorhodopsin gene, partial cds. KJ929747 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 5/IMCC14465-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 5 IMCC14465-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683) TTGCTGACTGTGCCGCTTCTGATGGTTGAGTTTTTCCTCATCCTCTCAGCGATTGCAAAAGTGCCTGCAGGTGTATTCTGGAGACTGCTTATCTTCACAACCTTGATGTTGGTCTTCGGTTATCTCGGCGAGTCCGGCAAAATGAATGTCATGGCCGGTTTTGTCCTTGGTATGATTGCATGGTTTGTTGTTCTGTATGAAATCTTCGCAGGTGAGGCCAGCAAAATTAGTGCTGAACAAGCCAGTGAAACTGTGCAGAAAGCTTTCAACCTAATGCGTTGGATTGTGACAATC LLTVPLLMVEFFLILSAIAKVPAGVFWRLLIFTTLMLVFGYLGESGKMNVMAGFVLGMIAWFVVLYEIFAGEASKISAEQASETVQKAFNLMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTGACTGTGCCGCTTCTGATGGTTGAGTTTTTCCTCATCCTCTCAGCG---------ATT---GCAAAAGTGCCTGCA---GGTGTA------------------------------------TTCTGGAGA---CTGCTTATCTTCACAACCTTGATGTTGGTCTTCGGTTATCTCGGCGAG---------TCC------------------GGC------AAA---------------------------------ATG------------------------------------------------------------------AATGTC------------------ATGGCCGGT---TTTGTCCTTGGTATGATTGCATGGTTTGTTGTTCTGTATGAAATC---------------TTC------GCA---GGTGAGGCCAGCAAAATTAGTGCTGAA------CAA---GCCAGTGAAACTGTG---CAG---AAA---GCT---TTC---AAC---CTAATG---CGTTGGATTGTGACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFFLILSA---I-AKVPA-GV------------FWR-LLIFTTLMLVFGYLGE---S------G--K-----------M----------------------NV------MAG-FVLGMIAWFVVLYEI-----F--A-GEASKISAE--Q-ASETV-Q-K-A-F-N-LM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha5-a]_KJ929483 [III-Alpha5-a] PRGD_OTU134_6d134af92f4d49efa3102a282d747712 gb|KJ929483| PRGD_OTU134_6d134af92f4d49efa3102a282d747712, putative proteorhodopsin gene, partial cds. PRGD_OTU134_6d134af92f4d49efa3102a282d747712, putative proteorhodopsin gene, partial cds. KJ929483 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 5/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 5 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACTGTTCCACTTCTGATGATTGAATTCTACCTTATACTCAGCGCTATTACTAAAGTGTCTTCTGGCATTTTCTGGCGTCTGATGATTGGTACACTCGTCATGCTTATCGGTGGATATATTGGTGAAACTGCTTATACCGAAGAAAGCGCTCGTATTTTTGGTGATTCCACCATTACTATTGGCTTTGTTATTGGTATGCTC LITVPLLMIEFYLILSAITKVSSGIFWRLMIGTLVMLIGGYIGETAYTEESARIFGDSTITIGFVIGML ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTTCCACTTCTGATGATTGAATTCTACCTTATACTCAGCGCT---------ATT---ACTAAAGTGTCTTCT---GGCATT------------------------------------TTCTGGCGT---CTGATGATTGGTACACTCGTCATGCTTATCGGTGGATATATTGGTGAA---------ACT------------------GCT------TAT---------------------------------ACC------------------------------------GAAGAAAGCGCTCGTATTTTTGGTGATTCCACCATT------------------ACTATTGGC---TTTGTTATTGGTATGCTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILSA---I-TKVSS-GI------------FWR-LMIGTLVMLIGGYIGE---T------A--Y-----------T------------EESARIFGDSTI------TIG-FVIGML----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [III-Alpha5-a]_KJ929485 [III-Alpha5-a] PRGD_OTU134_b6482f13acb5bc9fd2f792755dc00efa gb|KJ929485| PRGD_OTU134_b6482f13acb5bc9fd2f792755dc00efa, putative proteorhodopsin gene, partial cds. PRGD_OTU134_b6482f13acb5bc9fd2f792755dc00efa, putative proteorhodopsin gene, partial cds. KJ929485 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 5/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 5 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACTGTTCCACTTCTGATGATTGAATTCTACCTTATACTCAGCGCTATTACTAAAGTGTCTTCTGGCATTTTCTGGCGTCTGATGATTGGTACACTCGTCATGCTTATCGGTGGATATATTGGTGAAACTGCTTATACCGAAGAAAGCGCTCGTATTTTTGGTGATTCCACCATTACTATTGGCTTTGTTATTGGTATGCTCGGTTGGGCCTATATCCTGTATGAAATCTTCGCTGGTGAAGCAGGACAACTTAGTGCTGAAAAAGCACCTGAATCTGTTCAGTCTGCTTTCTCACTAATGCGGTGGATTGTAACCATC LITVPLLMIEFYLILSAITKVSSGIFWRLMIGTLVMLIGGYIGETAYTEESARIFGDSTITIGFVIGMLGWAYILYEIFAGEAGQLSAEKAPESVQSAFSLMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTTCCACTTCTGATGATTGAATTCTACCTTATACTCAGCGCT---------ATT---ACTAAAGTGTCTTCT---GGCATT------------------------------------TTCTGGCGT---CTGATGATTGGTACACTCGTCATGCTTATCGGTGGATATATTGGTGAA---------ACT------------------GCT------TAT---------------------------------ACC------------------------------------GAAGAAAGCGCTCGTATTTTTGGTGATTCCACCATT------------------ACTATTGGC---TTTGTTATTGGTATGCTCGGTTGGGCCTATATCCTGTATGAAATC---------------TTC------GCT---GGTGAAGCAGGACAACTTAGTGCTGAA------AAA---GCACCTGAATCTGTT---CAG---TCT---GCT---TTC---TCA---CTAATG---CGGTGGATTGTAACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILSA---I-TKVSS-GI------------FWR-LMIGTLVMLIGGYIGE---T------A--Y-----------T------------EESARIFGDSTI------TIG-FVIGMLGWAYILYEI-----F--A-GEAGQLSAE--K-APESV-Q-S-A-F-S-LM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha5-a]_KJ929484 [III-Alpha5-a] PRGD_OTU134_86d9274563dbfddff177a49d0d05f6f3 gb|KJ929484| PRGD_OTU134_86d9274563dbfddff177a49d0d05f6f3, putative proteorhodopsin gene, partial cds. PRGD_OTU134_86d9274563dbfddff177a49d0d05f6f3, putative proteorhodopsin gene, partial cds. KJ929484 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 5/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 5 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) TTGATTACTGTGCCACTTCTGATGATTGAGTTCTACCTCATCCTCAGCGCGATTACGAAAGTGTCTTCTGGCATCTTCTGGCGTTTGATGATTGGTACACTAGTCATGCTAATCGGTGGATATATCGGTGAATCCAGCTTTACTGATGAAAACGCTCGTATCTTTGGTGATGCCACCATTACGATCGGTTTCGTTATTGGTATGCTCGGGTGGGCCTATATTCTTTATGAAATCTTTGCTGGTGAAGCAGGACAGCTGAGTGCTGAAAAAGCACCCGAGTCTGTGCAATCTGCTTTCTCAACAATGCGGTGGATTGTTACCATC LITVPLLMIEFYLILSAITKVSSGIFWRLMIGTLVMLIGGYIGESSFTDENARIFGDATITIGFVIGMLGWAYILYEIFAGEAGQLSAEKAPESVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCACTTCTGATGATTGAGTTCTACCTCATCCTCAGCGCG---------ATT---ACGAAAGTGTCTTCT---GGCATC------------------------------------TTCTGGCGT---TTGATGATTGGTACACTAGTCATGCTAATCGGTGGATATATCGGTGAA---------TCC------------------AGC------TTT---------------------------------ACT------------------------------------GATGAAAACGCTCGTATCTTTGGTGATGCCACCATT------------------ACGATCGGT---TTCGTTATTGGTATGCTCGGGTGGGCCTATATTCTTTATGAAATC---------------TTT------GCT---GGTGAAGCAGGACAGCTGAGTGCTGAA------AAA---GCACCCGAGTCTGTG---CAA---TCT---GCT---TTC---TCA---ACAATG---CGGTGGATTGTTACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILSA---I-TKVSS-GI------------FWR-LMIGTLVMLIGGYIGE---S------S--F-----------T------------DENARIFGDATI------TIG-FVIGMLGWAYILYEI-----F--A-GEAGQLSAE--K-APESV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha5-a]_KJ929482 [III-Alpha5-a] PRGD_OTU134_otuREP_964d6fae5467fe00b7c2cd3e9ed47754 gb|KJ929482| PRGD_OTU134_otuREP_964d6fae5467fe00b7c2cd3e9ed47754, putative proteorhodopsin gene, partial cds. PRGD_OTU134_otuREP_964d6fae5467fe00b7c2cd3e9ed47754, putative proteorhodopsin gene, partial cds. KJ929482 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 5/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 5 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) TTGATTACTGTGCCACTTCTGATGATTGAGTTCTACCTCATCCTCAGCGCGATTACGAAAGTGTCTTCTGGCATCTTCTGGCGTTTGATGATTGGTACACTAGTCATGCTAATCGGTGGATATATCGGTGAATCCAGCTTTACTGATGAAAACGCTCGTATCTTTGGTGATGCCACCATTACGATCGGTTTCGTTATTGGTATGCTC LITVPLLMIEFYLILSAITKVSSGIFWRLMIGTLVMLIGGYIGESSFTDENARIFGDATITIGFVIGML ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCACTTCTGATGATTGAGTTCTACCTCATCCTCAGCGCG---------ATT---ACGAAAGTGTCTTCT---GGCATC------------------------------------TTCTGGCGT---TTGATGATTGGTACACTAGTCATGCTAATCGGTGGATATATCGGTGAA---------TCC------------------AGC------TTT---------------------------------ACT------------------------------------GATGAAAACGCTCGTATCTTTGGTGATGCCACCATT------------------ACGATCGGT---TTCGTTATTGGTATGCTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILSA---I-TKVSS-GI------------FWR-LMIGTLVMLIGGYIGE---S------S--F-----------T------------DENARIFGDATI------TIG-FVIGML----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927067 [III-Alpha4-c] PRGD_OTU005a_4a6e51caf6ad2f6ce7425262b3c38e92 gb|KJ927067| PRGD_OTU005a_4a6e51caf6ad2f6ce7425262b3c38e92, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_4a6e51caf6ad2f6ce7425262b3c38e92, putative proteorhodopsin gene, partial cds. KJ927067 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185) CTCATCACAGTTCCACTGCTGATGGTTGAATTCTATCTCATTCTACGGGCAATTACTAACGTCTCAGGTGGTATTTTCTGGCGCTTAATGATCGGTTCACTTGTTATGTTAGCCGCGGGCTACATGGGCGAAGCTGGCTACATCAATGCTATGCTTGGTTTCATTATTGGGATGGCCGGTTGGGCATATATTCTGTATGAAATCTTTATGGGTGAAGCGAGCCAAGTAGCTGCGGAGCAGGCTCCAGAATCGGTTCAATCTGCATTTACGACAATGCGTTGGATCGTATCAATC LITVPLLMVEFYLILRAITNVSGGIFWRLMIGSLVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFMGEASQVAAEQAPESVQSAFTTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTTCCACTGCTGATGGTTGAATTCTATCTCATTCTACGGGCA---------ATT---ACTAACGTCTCAGGT---GGTATT------------------------------------TTCTGGCGC---TTAATGATCGGTTCACTTGTTATGTTAGCCGCGGGCTACATGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ATGCTTGGT---TTCATTATTGGGATGGCCGGTTGGGCATATATTCTGTATGAAATC---------------TTT------ATG---GGTGAAGCGAGCCAAGTAGCTGCGGAG------CAG---GCTCCAGAATCGGTT---CAA---TCT---GCA---TTT---ACG---ACAATG---CGTTGGATCGTATCAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGSLVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--M-GEASQVAAE--Q-APESV-Q-S-A-F-T-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927098 [III-Alpha4-c] PRGD_OTU005a_f4a91351046fd167a8c2dc5506c50afd gb|KJ927098| PRGD_OTU005a_f4a91351046fd167a8c2dc5506c50afd, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_f4a91351046fd167a8c2dc5506c50afd, putative proteorhodopsin gene, partial cds. KJ927098 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTCATCACAGTCCCTCTGTTGATGGTTGAATTCTATCTCATTCTACGGGCAATTACTAACGTCTCAGGTGGTATTTTCTGGCGCTTAATGATCGGTTCACTTGTTATGTTAGCCGCGGGCTACATGGGCGAAGCTGGCTACATCAATGCTATGCTTGGTTTCATTATTGGGATGGCCGGTTGGGCATATATTCTGTATGAAATCTTTATGGGTGAAGCGAGCCAAGTAGCTGCGGAGCAGGCTCCAGAATCGGTTCAATCTGCATTTACGACAATGCGTTGGATCGTATCAATC LITVPLLMVEFYLILRAITNVSGGIFWRLMIGSLVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFMGEASQVAAEQAPESVQSAFTTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTCCCTCTGTTGATGGTTGAATTCTATCTCATTCTACGGGCA---------ATT---ACTAACGTCTCAGGT---GGTATT------------------------------------TTCTGGCGC---TTAATGATCGGTTCACTTGTTATGTTAGCCGCGGGCTACATGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ATGCTTGGT---TTCATTATTGGGATGGCCGGTTGGGCATATATTCTGTATGAAATC---------------TTT------ATG---GGTGAAGCGAGCCAAGTAGCTGCGGAG------CAG---GCTCCAGAATCGGTT---CAA---TCT---GCA---TTT---ACG---ACAATG---CGTTGGATCGTATCAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGSLVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--M-GEASQVAAE--Q-APESV-Q-S-A-F-T-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927063 [III-Alpha4-c] PRGD_OTU005a_3b92cd12af588887112267ba9b83807e gb|KJ927063| PRGD_OTU005a_3b92cd12af588887112267ba9b83807e, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_3b92cd12af588887112267ba9b83807e, putative proteorhodopsin gene, partial cds. KJ927063 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683) CTCATCACAGTCCCTCTGTTGATGGTTGAATTCTATCTCATTCTACGGGCAATTACTAACGTCTCAGGTGGTATTTTCTGGCGCTTAATGATCGGTTCACTTGTTATGTTAGCCGCGGGCTACATGGGCGAAGCTGGCTACATCAATGCTATGCTTGGTTTCATTATTGGGATGGCCGGTTGGGCATATATTCTATATGAAATCTTCCTTGGTGAAGCAGGGCAGGTTGCATCCGAACAGGCGCCTGAGTCAGTTCAAAGCGCATTTAGCACAATGCGGTGGATCGTATCAATT LITVPLLMVEFYLILRAITNVSGGIFWRLMIGSLVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFLGEAGQVASEQAPESVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTCCCTCTGTTGATGGTTGAATTCTATCTCATTCTACGGGCA---------ATT---ACTAACGTCTCAGGT---GGTATT------------------------------------TTCTGGCGC---TTAATGATCGGTTCACTTGTTATGTTAGCCGCGGGCTACATGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ATGCTTGGT---TTCATTATTGGGATGGCCGGTTGGGCATATATTCTATATGAAATC---------------TTC------CTT---GGTGAAGCAGGGCAGGTTGCATCCGAA------CAG---GCGCCTGAGTCAGTT---CAA---AGC---GCA---TTT---AGC---ACAATG---CGGTGGATCGTATCAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGSLVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--L-GEAGQVASE--Q-APESV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927050 [III-Alpha4-c] PRGD_OTU005a_otuREP_c00f88e7059ba6c5cc3ddbb620083abe gb|KJ927050| PRGD_OTU005a_otuREP_c00f88e7059ba6c5cc3ddbb620083abe, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_otuREP_c00f88e7059ba6c5cc3ddbb620083abe, putative proteorhodopsin gene, partial cds. KJ927050 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTCATCACAGTTCCACTGCTGATGGTTGAATTCTACCTCATTTTACGGGCGATTACTAACGTCTCCGGTGGCATTTTTTGGCGCTTAATGATCGGTACGATTGTTATGTTGGCTGCAGGTTACATGGGCGAAGCCGGCTACATCAATGCGATGCTTGGTTTCATTATTGGGATGGCCGGTTGGGCATATATTCTATATGAAATCTTCCTTGGTGAAGCAGGGCAGGTTGCATCCGAACAGGCGCCTGAGTCAGTTCAAAGCGCATTTAGCACAATGCGGTGGATCGTATCAATT LITVPLLMVEFYLILRAITNVSGGIFWRLMIGTIVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFLGEAGQVASEQAPESVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTTCCACTGCTGATGGTTGAATTCTACCTCATTTTACGGGCG---------ATT---ACTAACGTCTCCGGT---GGCATT------------------------------------TTTTGGCGC---TTAATGATCGGTACGATTGTTATGTTGGCTGCAGGTTACATGGGCGAA---------GCC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCG------------------ATGCTTGGT---TTCATTATTGGGATGGCCGGTTGGGCATATATTCTATATGAAATC---------------TTC------CTT---GGTGAAGCAGGGCAGGTTGCATCCGAA------CAG---GCGCCTGAGTCAGTT---CAA---AGC---GCA---TTT---AGC---ACAATG---CGGTGGATCGTATCAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGTIVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--L-GEAGQVASE--Q-APESV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927072 [III-Alpha4-c] PRGD_OTU005a_6de6149205fb3233ea9bc19b5bfba5ce gb|KJ927072| PRGD_OTU005a_6de6149205fb3233ea9bc19b5bfba5ce, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_6de6149205fb3233ea9bc19b5bfba5ce, putative proteorhodopsin gene, partial cds. KJ927072 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683) CTCATCACAGTTCCACTGCTCATGGTTGAATTCTACCTCATTTTACGGGCGATTACTAACGTCTCCGGTGGCATTTTTTGGCGCTTAATGATCGGTTCGATTGTTATGTTGGCTGCAGGTTACATGGGCGAAGCCGGCTACATCAATGCGATGCTTGGTTTCATTATTGGGATGGCCGGTTGGGCATATATTCTATATGAAATCTTCATGGGCGAAGCGAGCCAAGTAGCTGCAGAAGAAGCGCCAGAATCAGTGCAATCTGCGTTTACAACAATGCGGTGGATCGTATCAATT LITVPLLMVEFYLILRAITNVSGGIFWRLMIGSIVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFMGEASQVAAEEAPESVQSAFTTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTTCCACTGCTCATGGTTGAATTCTACCTCATTTTACGGGCG---------ATT---ACTAACGTCTCCGGT---GGCATT------------------------------------TTTTGGCGC---TTAATGATCGGTTCGATTGTTATGTTGGCTGCAGGTTACATGGGCGAA---------GCC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCG------------------ATGCTTGGT---TTCATTATTGGGATGGCCGGTTGGGCATATATTCTATATGAAATC---------------TTC------ATG---GGCGAAGCGAGCCAAGTAGCTGCAGAA------GAA---GCGCCAGAATCAGTG---CAA---TCT---GCG---TTT---ACA---ACAATG---CGGTGGATCGTATCAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGSIVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--M-GEASQVAAE--E-APESV-Q-S-A-F-T-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927079 [III-Alpha4-c] PRGD_OTU005a_a0372a8a3f5b7cd31398a262405925cb gb|KJ927079| PRGD_OTU005a_a0372a8a3f5b7cd31398a262405925cb, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_a0372a8a3f5b7cd31398a262405925cb, putative proteorhodopsin gene, partial cds. KJ927079 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTCATCACAGTTCCACTGCTGATGGTTGAATTCTACCTCATTTTACGGGCGATTACTAACGTCTCCGGTGGCATTTTTTGGCGCTTAATGATCGGTTCGATTGTTATGTTGGCTGCAGGTTACATGGGCGAAGCCGGCTACATCAATGCGATGCTTGGTTTCATTATTGGGATGGCCGGTTGGGCATATATTCTATATGAAATCTTCATGGGCGAAGCGAGCCAAGTAGCTGCGGAAGAAGCGCCAGAATCAGTGCAATCTGCGTTTACAACAATGCGGTGGATCGTATCAATC LITVPLLMVEFYLILRAITNVSGGIFWRLMIGSIVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFMGEASQVAAEEAPESVQSAFTTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTTCCACTGCTGATGGTTGAATTCTACCTCATTTTACGGGCG---------ATT---ACTAACGTCTCCGGT---GGCATT------------------------------------TTTTGGCGC---TTAATGATCGGTTCGATTGTTATGTTGGCTGCAGGTTACATGGGCGAA---------GCC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCG------------------ATGCTTGGT---TTCATTATTGGGATGGCCGGTTGGGCATATATTCTATATGAAATC---------------TTC------ATG---GGCGAAGCGAGCCAAGTAGCTGCGGAA------GAA---GCGCCAGAATCAGTG---CAA---TCT---GCG---TTT---ACA---ACAATG---CGGTGGATCGTATCAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGSIVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--M-GEASQVAAE--E-APESV-Q-S-A-F-T-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927082 [III-Alpha4-c] PRGD_OTU005a_bfbd7770d2149fb82bb712ace9ee6075 gb|KJ927082| PRGD_OTU005a_bfbd7770d2149fb82bb712ace9ee6075, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_bfbd7770d2149fb82bb712ace9ee6075, putative proteorhodopsin gene, partial cds. KJ927082 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-23.5956, 69.0419) CTCATCACAGTTCCACTGCTGATGGTTGAATTCTACCTCATTTTACGGGCGATTACTAACGTCTCAGGCGGCATTTTTTGGCGCTTAATGATCGGTTCGATTGTTATGTTGGCTGCAGGTTACATGGGCGAAGCCGGCTACATCAATGCGATGCTTGGTTTCATTATTGGGATGGCCGGTTGGGCATATATTCTATATGAAATCTTCATGGGCGAAGCTAGCCAAGTAGCTGCGGAGGAAGCACCAGAATCAGTGCAATCTGCGTTTACAACAATGCGGTGGATCGTATCAATC LITVPLLMVEFYLILRAITNVSGGIFWRLMIGSIVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFMGEASQVAAEEAPESVQSAFTTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTTCCACTGCTGATGGTTGAATTCTACCTCATTTTACGGGCG---------ATT---ACTAACGTCTCAGGC---GGCATT------------------------------------TTTTGGCGC---TTAATGATCGGTTCGATTGTTATGTTGGCTGCAGGTTACATGGGCGAA---------GCC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCG------------------ATGCTTGGT---TTCATTATTGGGATGGCCGGTTGGGCATATATTCTATATGAAATC---------------TTC------ATG---GGCGAAGCTAGCCAAGTAGCTGCGGAG------GAA---GCACCAGAATCAGTG---CAA---TCT---GCG---TTT---ACA---ACAATG---CGGTGGATCGTATCAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGSIVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--M-GEASQVAAE--E-APESV-Q-S-A-F-T-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927094 [III-Alpha4-c] PRGD_OTU005a_ec026ede58943a419bc74b9b767274ab gb|KJ927094| PRGD_OTU005a_ec026ede58943a419bc74b9b767274ab, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_ec026ede58943a419bc74b9b767274ab, putative proteorhodopsin gene, partial cds. KJ927094 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCATCACAGTTCCGCTGTTGATGGTTGAATTCTACCTCATTTTACGGGCGATTACTAACGTCTCCGGCGGCATTTTTTGGCGCTTAATGATCGGTTCGATTGTTATGTTGGCTGCAGGTTACATGGGCGAAGCCGGCTACATCAATGCGATGCTTGGTTTCATTATTGGGATGGCCGGTTGGGCATATATTCTATATGAAATCTTCATGGGCGAAGCTAGCCAAGTAGCTGCGGAGGAAGCACCAGAATCAGTGCAATCTGCGTTTACAACAATGCGGTGGATCGTATCAATC LITVPLLMVEFYLILRAITNVSGGIFWRLMIGSIVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFMGEASQVAAEEAPESVQSAFTTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTTCCGCTGTTGATGGTTGAATTCTACCTCATTTTACGGGCG---------ATT---ACTAACGTCTCCGGC---GGCATT------------------------------------TTTTGGCGC---TTAATGATCGGTTCGATTGTTATGTTGGCTGCAGGTTACATGGGCGAA---------GCC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCG------------------ATGCTTGGT---TTCATTATTGGGATGGCCGGTTGGGCATATATTCTATATGAAATC---------------TTC------ATG---GGCGAAGCTAGCCAAGTAGCTGCGGAG------GAA---GCACCAGAATCAGTG---CAA---TCT---GCG---TTT---ACA---ACAATG---CGGTGGATCGTATCAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGSIVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--M-GEASQVAAE--E-APESV-Q-S-A-F-T-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927061 [III-Alpha4-c] PRGD_OTU005a_3314410c4428bf27e7bdcf28250f8565 gb|KJ927061| PRGD_OTU005a_3314410c4428bf27e7bdcf28250f8565, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_3314410c4428bf27e7bdcf28250f8565, putative proteorhodopsin gene, partial cds. KJ927061 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCATCACAGTTCCATTGCTGATGGTTGAATTCTATCTCATTCTACGGGCGATCACTAACGTCTCAGGTGGTATTTTTTGGCGCTTAATGATTGGTTCGATTGTTATGTTGGCCGCAGGATACATGGGCGAAGCTGGCTACATCAATGCTATGCTTGGTTTCATCATTGGGATGGCCGGCTGGGCATACATTCTGTATGAAATCTTCATGGGCGAGGCGAGTCAAGTAGCTGCGGAGCAAGCACCAGAATCAGTGCAATCTGCGTTCACAACAATGCGTTGGATCGTATCAATC LITVPLLMVEFYLILRAITNVSGGIFWRLMIGSIVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFMGEASQVAAEQAPESVQSAFTTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTTCCATTGCTGATGGTTGAATTCTATCTCATTCTACGGGCG---------ATC---ACTAACGTCTCAGGT---GGTATT------------------------------------TTTTGGCGC---TTAATGATTGGTTCGATTGTTATGTTGGCCGCAGGATACATGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------ATGCTTGGT---TTCATCATTGGGATGGCCGGCTGGGCATACATTCTGTATGAAATC---------------TTC------ATG---GGCGAGGCGAGTCAAGTAGCTGCGGAG------CAA---GCACCAGAATCAGTG---CAA---TCT---GCG---TTC---ACA---ACAATG---CGTTGGATCGTATCAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGSIVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--M-GEASQVAAE--Q-APESV-Q-S-A-F-T-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927057 [III-Alpha4-c] PRGD_OTU005a_1cd60cc9f494d4151463f9493441d7b8 gb|KJ927057| PRGD_OTU005a_1cd60cc9f494d4151463f9493441d7b8, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_1cd60cc9f494d4151463f9493441d7b8, putative proteorhodopsin gene, partial cds. KJ927057 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (72.0542, -130.8781; 69.5142, -133.4185) CTCATCACAGTTCCACTGCTGATGGTTGAATTCTACCTCATTTTACGGGCGATTACTAACGTCTCCGGTGGCATTTTTTGGCGCTTAATGATCGGTACGATTGTTATGTTGGCTGCAGGTTACATGGGCGAAGCCGGCTACATCAATGCGATGCTTGGTTTCATTATTGGGATGGCCGGTTGGGCATATATTCTGTATGAAATCTTTATGGGTGAAGCGAGCCAAGTAGCTGCGGAGCAGGCTCCAGAATCGGTTCAATCTGCATTTACGACAATGCGTTGGATCGTATCAATC LITVPLLMVEFYLILRAITNVSGGIFWRLMIGTIVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFMGEASQVAAEQAPESVQSAFTTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTTCCACTGCTGATGGTTGAATTCTACCTCATTTTACGGGCG---------ATT---ACTAACGTCTCCGGT---GGCATT------------------------------------TTTTGGCGC---TTAATGATCGGTACGATTGTTATGTTGGCTGCAGGTTACATGGGCGAA---------GCC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCG------------------ATGCTTGGT---TTCATTATTGGGATGGCCGGTTGGGCATATATTCTGTATGAAATC---------------TTT------ATG---GGTGAAGCGAGCCAAGTAGCTGCGGAG------CAG---GCTCCAGAATCGGTT---CAA---TCT---GCA---TTT---ACG---ACAATG---CGTTGGATCGTATCAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGTIVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--M-GEASQVAAE--Q-APESV-Q-S-A-F-T-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927051 [III-Alpha4-c] PRGD_OTU005a_0b06e928f63146d3f411213d5207cb6c gb|KJ927051| PRGD_OTU005a_0b06e928f63146d3f411213d5207cb6c, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_0b06e928f63146d3f411213d5207cb6c, putative proteorhodopsin gene, partial cds. KJ927051 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185) CTCATCACAGTTCCACTGCTGATGGTTGAATTCTACCTCATTTTACGGGCGATTACTAACGTCTCCGGTGGCATTTTTTGGCGCTTAATGATCGGTACGATTGTTATGTTGGCTGCAGGTTACATGGGCGAAGCCGGCTACATCAATGCGATGCTTGGTTTCATTATTGGGATGGCCGGTTGGGCATATATTCTATATGAAATCTTCTTGGGTGAAGCTGGTCAAGTGGCCTCCGAGCAAGCTCCGGAATCAGTTCAGTCTGCTTTTGTGACCATGCGTTGGATTGTGACCATT LITVPLLMVEFYLILRAITNVSGGIFWRLMIGTIVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFLGEAGQVASEQAPESVQSAFVTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTTCCACTGCTGATGGTTGAATTCTACCTCATTTTACGGGCG---------ATT---ACTAACGTCTCCGGT---GGCATT------------------------------------TTTTGGCGC---TTAATGATCGGTACGATTGTTATGTTGGCTGCAGGTTACATGGGCGAA---------GCC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCG------------------ATGCTTGGT---TTCATTATTGGGATGGCCGGTTGGGCATATATTCTATATGAAATC---------------TTC------TTG---GGTGAAGCTGGTCAAGTGGCCTCCGAG------CAA---GCTCCGGAATCAGTT---CAG---TCT---GCT---TTT---GTG---ACCATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGTIVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--L-GEAGQVASE--Q-APESV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927064 [III-Alpha4-c] PRGD_OTU005a_3e2677882d1e03c637418805c626a573 gb|KJ927064| PRGD_OTU005a_3e2677882d1e03c637418805c626a573, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_3e2677882d1e03c637418805c626a573, putative proteorhodopsin gene, partial cds. KJ927064 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) CTGATCACCGTGCCGCTGTTGATGATTGAGTTCTATCTCATTCTAAGAGCAATCACGAATGTCTCTGGGGGCGTGTTTTGGCGCTTGATGATCGGTACGTTGGTGATGCTTGCGGCAGGATATGCTGGTGAAGCCGGCTATATCAGCCCGCTGATCGGATTTGTTGTGGGAATGGCCGGTTGGGCGTACATTCTTTATGAAATCTTCTTTGGGGAAGCTGGACAGGTGGCTTCAGATCAAGCACCTGAATCAGTGCAAAGCGCGTTTTCAACGATGCGCTGGATCGTGACCATT LITVPLLMIEFYLILRAITNVSGGVFWRLMIGTLVMLAAGYAGEAGYISPLIGFVVGMAGWAYILYEIFFGEAGQVASDQAPESVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTGCCGCTGTTGATGATTGAGTTCTATCTCATTCTAAGAGCA---------ATC---ACGAATGTCTCTGGG---GGCGTG------------------------------------TTTTGGCGC---TTGATGATCGGTACGTTGGTGATGCTTGCGGCAGGATATGCTGGTGAA---------GCC------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AGCCCG------------------CTGATCGGA---TTTGTTGTGGGAATGGCCGGTTGGGCGTACATTCTTTATGAAATC---------------TTC------TTT---GGGGAAGCTGGACAGGTGGCTTCAGAT------CAA---GCACCTGAATCAGTG---CAA---AGC---GCG---TTT---TCA---ACGATG---CGCTGGATCGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LMIGTLVMLAAGYAGE---A------G--Y-----------I----------------------SP------LIG-FVVGMAGWAYILYEI-----F--F-GEAGQVASD--Q-APESV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927083 [III-Alpha4-c] PRGD_OTU005a_c64c6a4e574e6ae2469d7ebd13d5917e gb|KJ927083| PRGD_OTU005a_c64c6a4e574e6ae2469d7ebd13d5917e, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_c64c6a4e574e6ae2469d7ebd13d5917e, putative proteorhodopsin gene, partial cds. KJ927083 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATCACCGTGCCGCTGTTGATGATTGAGTTCTATCTCATTCTAAGAGCAATCACGAATGTCTCTGGGGGCGTGTTTTGGCGCTTGATGATCGGTACTTTGGTGATGCTTGCGGCAGGATATGCTGGTGAAGCCGGCTATATCAGCCCGCTGATCGGATTTGTTGTGGGAATGGCCGGTTGGGCGTACATTCTTTATGAAATCTTTTTTGGGGAAGCTGGACAGGTGGCTTCAGATCAAGCACCTGAATCAGTGCAAAGCGCGTTTTCAACAATGCGCTGGATCGTGACCATT LITVPLLMIEFYLILRAITNVSGGVFWRLMIGTLVMLAAGYAGEAGYISPLIGFVVGMAGWAYILYEIFFGEAGQVASDQAPESVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTGCCGCTGTTGATGATTGAGTTCTATCTCATTCTAAGAGCA---------ATC---ACGAATGTCTCTGGG---GGCGTG------------------------------------TTTTGGCGC---TTGATGATCGGTACTTTGGTGATGCTTGCGGCAGGATATGCTGGTGAA---------GCC------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AGCCCG------------------CTGATCGGA---TTTGTTGTGGGAATGGCCGGTTGGGCGTACATTCTTTATGAAATC---------------TTT------TTT---GGGGAAGCTGGACAGGTGGCTTCAGAT------CAA---GCACCTGAATCAGTG---CAA---AGC---GCG---TTT---TCA---ACAATG---CGCTGGATCGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LMIGTLVMLAAGYAGE---A------G--Y-----------I----------------------SP------LIG-FVVGMAGWAYILYEI-----F--F-GEAGQVASD--Q-APESV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927090 [III-Alpha4-c] PRGD_OTU005a_e1699785906743922e4b3849f1bc6336 gb|KJ927090| PRGD_OTU005a_e1699785906743922e4b3849f1bc6336, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_e1699785906743922e4b3849f1bc6336, putative proteorhodopsin gene, partial cds. KJ927090 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097), Indian Ocean (-35.05, 23.73) CTGATCACCGTGCCGCTGTTGATGATTGAGTTCTATCTCATTTTAAGAGCAATCACAAATGTCTCGGGGGGCGTGTTTTGGCGCTTGATGATCGGTACGTTGGTCATGCTTGCGGCAGGATATGCTGGTGAAGCCGGCTATATCAGCCCACTGATCGGATTTGTCGTGGGAATGGCCGGTTGGGCGTACATTCTTTATGAAATCTTCTTTGGTGAAGCTGGACAGGTGGCCTCAGATCAAGCACCTGAATCAGTGCAAAGCGCGTTTTCAACGATGCGCTGGATCGTGACCATT LITVPLLMIEFYLILRAITNVSGGVFWRLMIGTLVMLAAGYAGEAGYISPLIGFVVGMAGWAYILYEIFFGEAGQVASDQAPESVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTGCCGCTGTTGATGATTGAGTTCTATCTCATTTTAAGAGCA---------ATC---ACAAATGTCTCGGGG---GGCGTG------------------------------------TTTTGGCGC---TTGATGATCGGTACGTTGGTCATGCTTGCGGCAGGATATGCTGGTGAA---------GCC------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AGCCCA------------------CTGATCGGA---TTTGTCGTGGGAATGGCCGGTTGGGCGTACATTCTTTATGAAATC---------------TTC------TTT---GGTGAAGCTGGACAGGTGGCCTCAGAT------CAA---GCACCTGAATCAGTG---CAA---AGC---GCG---TTT---TCA---ACGATG---CGCTGGATCGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LMIGTLVMLAAGYAGE---A------G--Y-----------I----------------------SP------LIG-FVVGMAGWAYILYEI-----F--F-GEAGQVASD--Q-APESV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927089 [III-Alpha4-c] PRGD_OTU005a_e115d6fc3e730b16b517e6132718e206 gb|KJ927089| PRGD_OTU005a_e115d6fc3e730b16b517e6132718e206, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_e115d6fc3e730b16b517e6132718e206, putative proteorhodopsin gene, partial cds. KJ927089 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTGATCACCGTGCCGCTGTTGATGATTGAGTTCTATCTCATTCTAAGAGCAATCACGAATGTCTCGGGGGGCGTGTTTTGGCGCTTGATGATCGGTACGTTGGTCATGCTTGCGGCAGGATATGCCGGTGAAGCCGGCTATATCAGCCCGCTGATCGGATTTGTCGTGGGAATGGCCGGTTGGGCGTACATTCTTTATGAAATCTTCTTTGGTGAAGCTGGACAGGTGGCTTCAGATCAAGCACCTGAATCAGTGCAAAGCGCGTTTTCAACGATGCGCTGGATCGTGACCATT LITVPLLMIEFYLILRAITNVSGGVFWRLMIGTLVMLAAGYAGEAGYISPLIGFVVGMAGWAYILYEIFFGEAGQVASDQAPESVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTGCCGCTGTTGATGATTGAGTTCTATCTCATTCTAAGAGCA---------ATC---ACGAATGTCTCGGGG---GGCGTG------------------------------------TTTTGGCGC---TTGATGATCGGTACGTTGGTCATGCTTGCGGCAGGATATGCCGGTGAA---------GCC------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AGCCCG------------------CTGATCGGA---TTTGTCGTGGGAATGGCCGGTTGGGCGTACATTCTTTATGAAATC---------------TTC------TTT---GGTGAAGCTGGACAGGTGGCTTCAGAT------CAA---GCACCTGAATCAGTG---CAA---AGC---GCG---TTT---TCA---ACGATG---CGCTGGATCGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LMIGTLVMLAAGYAGE---A------G--Y-----------I----------------------SP------LIG-FVVGMAGWAYILYEI-----F--F-GEAGQVASD--Q-APESV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927053 [III-Alpha4-c] PRGD_OTU005a_1151e06bea8ad005e0cf9fb300fbd9bb gb|KJ927053| PRGD_OTU005a_1151e06bea8ad005e0cf9fb300fbd9bb, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_1151e06bea8ad005e0cf9fb300fbd9bb, putative proteorhodopsin gene, partial cds. KJ927053 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATCACCGTGCCGCTCTTGATGATTGAGTTCTATCTCATTCTAAGAGCAATCACGAATGTCTCTGGGGGTGTGTTTTGGCGCTTGATGATCGGTACTTTGGTCATGCTTGCGGCCGGATATGCCGGTGAAGCCGGCTACATCAGCCCGCTGATCGGATTTGTCGTGGGAATGGCCGGCTGGGCGTACATTCTTTATGAAATCTTCTTTGGTGAAGCTGGACAGGTGGCTTCAGATCAAGCACCTGAATCAGTGCAAAGCGCGTTTTCAACGATGCGCTGGATCGTGACCATT LITVPLLMIEFYLILRAITNVSGGVFWRLMIGTLVMLAAGYAGEAGYISPLIGFVVGMAGWAYILYEIFFGEAGQVASDQAPESVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTGCCGCTCTTGATGATTGAGTTCTATCTCATTCTAAGAGCA---------ATC---ACGAATGTCTCTGGG---GGTGTG------------------------------------TTTTGGCGC---TTGATGATCGGTACTTTGGTCATGCTTGCGGCCGGATATGCCGGTGAA---------GCC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGCCCG------------------CTGATCGGA---TTTGTCGTGGGAATGGCCGGCTGGGCGTACATTCTTTATGAAATC---------------TTC------TTT---GGTGAAGCTGGACAGGTGGCTTCAGAT------CAA---GCACCTGAATCAGTG---CAA---AGC---GCG---TTT---TCA---ACGATG---CGCTGGATCGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LMIGTLVMLAAGYAGE---A------G--Y-----------I----------------------SP------LIG-FVVGMAGWAYILYEI-----F--F-GEAGQVASD--Q-APESV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927068 [III-Alpha4-c] PRGD_OTU005a_4ebef65bf6323ac317dd7fcae912ef29 gb|KJ927068| PRGD_OTU005a_4ebef65bf6323ac317dd7fcae912ef29, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_4ebef65bf6323ac317dd7fcae912ef29, putative proteorhodopsin gene, partial cds. KJ927068 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATCACCGTGCCGCTGTTGATGATTGAGTTCTATCTCATTCTAAGAGCAATCACGAATGTCTCGGGGGGCGTGTTTTGGCGCTTGATGATCGGTACTTTGGTCATGCTTGCGGCAGGATATGCCGGTGAAGCAGGCTACATCAGCCCGCTGATCGGATTTGTCGTGGGAATGGCCGGTTGGGCGTACATTCTTTATGAAATCTTCTTTGGTGAAGCTGGGCAGGTGGCTTCAGATCAAGCACCTGAATCAGTGCAAAGCGCGTTTTCAACGATGCGCTGGATCGTGACCATT LITVPLLMIEFYLILRAITNVSGGVFWRLMIGTLVMLAAGYAGEAGYISPLIGFVVGMAGWAYILYEIFFGEAGQVASDQAPESVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTGCCGCTGTTGATGATTGAGTTCTATCTCATTCTAAGAGCA---------ATC---ACGAATGTCTCGGGG---GGCGTG------------------------------------TTTTGGCGC---TTGATGATCGGTACTTTGGTCATGCTTGCGGCAGGATATGCCGGTGAA---------GCA------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGCCCG------------------CTGATCGGA---TTTGTCGTGGGAATGGCCGGTTGGGCGTACATTCTTTATGAAATC---------------TTC------TTT---GGTGAAGCTGGGCAGGTGGCTTCAGAT------CAA---GCACCTGAATCAGTG---CAA---AGC---GCG---TTT---TCA---ACGATG---CGCTGGATCGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LMIGTLVMLAAGYAGE---A------G--Y-----------I----------------------SP------LIG-FVVGMAGWAYILYEI-----F--F-GEAGQVASD--Q-APESV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927096 [III-Alpha4-c] PRGD_OTU005a_f08268686c9bac054dfcf3aed3b25904 gb|KJ927096| PRGD_OTU005a_f08268686c9bac054dfcf3aed3b25904, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_f08268686c9bac054dfcf3aed3b25904, putative proteorhodopsin gene, partial cds. KJ927096 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683) CTGATCACGGTGCCCCTATTGATGATTGAGTTTTATCTCATTCTAAGGGCAATCACGAATGTCTCTGGCGGCGTGTTCTGGCGCTTGATGATTGGTACTTTGGTTATGCTCGCGGCAGGATATGCCGGTGAAGCCGGCTACATCAGCCCGCTGATCGGATTTGTCGTGGGAATGGCCGGTTGGGGATATATCCTTTATGAAATCTTCTTCGGTGAAGCTGGACAGGTGGCTTCGGATCAAGCGCCTGAATCAGTGCAAAGCGCGTTTTCGACAATGCGCTGGATCGTGACCATT LITVPLLMIEFYLILRAITNVSGGVFWRLMIGTLVMLAAGYAGEAGYISPLIGFVVGMAGWGYILYEIFFGEAGQVASDQAPESVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACGGTGCCCCTATTGATGATTGAGTTTTATCTCATTCTAAGGGCA---------ATC---ACGAATGTCTCTGGC---GGCGTG------------------------------------TTCTGGCGC---TTGATGATTGGTACTTTGGTTATGCTCGCGGCAGGATATGCCGGTGAA---------GCC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGCCCG------------------CTGATCGGA---TTTGTCGTGGGAATGGCCGGTTGGGGATATATCCTTTATGAAATC---------------TTC------TTC---GGTGAAGCTGGACAGGTGGCTTCGGAT------CAA---GCGCCTGAATCAGTG---CAA---AGC---GCG---TTT---TCG---ACAATG---CGCTGGATCGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LMIGTLVMLAAGYAGE---A------G--Y-----------I----------------------SP------LIG-FVVGMAGWGYILYEI-----F--F-GEAGQVASD--Q-APESV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927062 [III-Alpha4-c] PRGD_OTU005a_35b4f896463796be400bc9d20689c94f gb|KJ927062| PRGD_OTU005a_35b4f896463796be400bc9d20689c94f, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_35b4f896463796be400bc9d20689c94f, putative proteorhodopsin gene, partial cds. KJ927062 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) CTGATCACAGTGCCCCTATTGATGATCGAATTCTATCTCATCTTAAGGGCGATCACGAATGTCTCTGGCGGCGTGTTCTGGCGCTTAATGGTCGGCACTTTGGTCATGCTTGCAGCAGGCTATGCAGGTGAAGCTGGCTACATCAGCCCATTGATTGGATTTGTCGTGGGCATGGCCGGTTGGGCATATATTCTCTATGAAATCTTTTATGGAGAAGCTGGGAAGGTGGCCTCAGATCAAGCGCCTGAATCAGTACAAAGCGCATTTTCAACAATGCGTTGGATCGTGACCATT LITVPLLMIEFYLILRAITNVSGGVFWRLMVGTLVMLAAGYAGEAGYISPLIGFVVGMAGWAYILYEIFYGEAGKVASDQAPESVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTGCCCCTATTGATGATCGAATTCTATCTCATCTTAAGGGCG---------ATC---ACGAATGTCTCTGGC---GGCGTG------------------------------------TTCTGGCGC---TTAATGGTCGGCACTTTGGTCATGCTTGCAGCAGGCTATGCAGGTGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGCCCA------------------TTGATTGGA---TTTGTCGTGGGCATGGCCGGTTGGGCATATATTCTCTATGAAATC---------------TTT------TAT---GGAGAAGCTGGGAAGGTGGCCTCAGAT------CAA---GCGCCTGAATCAGTA---CAA---AGC---GCA---TTT---TCA---ACAATG---CGTTGGATCGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LMVGTLVMLAAGYAGE---A------G--Y-----------I----------------------SP------LIG-FVVGMAGWAYILYEI-----F--Y-GEAGKVASD--Q-APESV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927084 [III-Alpha4-c] PRGD_OTU005a_c7b52c6302fddc5e487100dec3004eef gb|KJ927084| PRGD_OTU005a_c7b52c6302fddc5e487100dec3004eef, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_c7b52c6302fddc5e487100dec3004eef, putative proteorhodopsin gene, partial cds. KJ927084 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683) CTGATCACAGTGCCTCTGTTGATGATCGAATTCTATCTCATCTTAAGGGCGATCACAAATGTCTCTGGTGGCGTGTTCTGGCGCTTAATGGTCGGCACTTTGGTCATGCTTGCAGCAGGATATGCAGGTGAAGCTGGCTACATCAGCCCATTGATCGGATTTGTCGTGGGCATGGCCGGTTGGGCTTATATTCTTTATGAAATCTTTTATGGAGAAGCTGGGAAGGTGGCCTCAGATCAAGCGCCTGAATCAGTACAAAGCGCATTTTCAACAATGCGTTGGATCGTGACCATT LITVPLLMIEFYLILRAITNVSGGVFWRLMVGTLVMLAAGYAGEAGYISPLIGFVVGMAGWAYILYEIFYGEAGKVASDQAPESVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTGCCTCTGTTGATGATCGAATTCTATCTCATCTTAAGGGCG---------ATC---ACAAATGTCTCTGGT---GGCGTG------------------------------------TTCTGGCGC---TTAATGGTCGGCACTTTGGTCATGCTTGCAGCAGGATATGCAGGTGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGCCCA------------------TTGATCGGA---TTTGTCGTGGGCATGGCCGGTTGGGCTTATATTCTTTATGAAATC---------------TTT------TAT---GGAGAAGCTGGGAAGGTGGCCTCAGAT------CAA---GCGCCTGAATCAGTA---CAA---AGC---GCA---TTT---TCA---ACAATG---CGTTGGATCGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LMVGTLVMLAAGYAGE---A------G--Y-----------I----------------------SP------LIG-FVVGMAGWAYILYEI-----F--Y-GEAGKVASD--Q-APESV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927059 [III-Alpha4-c] PRGD_OTU005a_281ae44032fb584d2696c6386d7beb14 gb|KJ927059| PRGD_OTU005a_281ae44032fb584d2696c6386d7beb14, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_281ae44032fb584d2696c6386d7beb14, putative proteorhodopsin gene, partial cds. KJ927059 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683) CTGATCACAGTGCCCCTGTTGATGATCGAATTCTATCTCATCTTAAGGGCGATCACAAATGTCTCTGGTGGCGTGTTTTGGCGCTTAATGGTCGGCACTTTGGTCATGCTTGCAGCAGGATATGCAGGTGAAGCTGGCTACATCAGCCCATTGATCGGATTTGTCGTGGGCATGGCCGGTTGGGCATATATTCTTTATGAAATTTTTTATGGAGAAGCTGGGAAGGTGGCCTCAGATCAAGCGCCTGAATCAGTACAAAGTGCATTTTCAACAATGCGTTGGATCGTGACCATT LITVPLLMIEFYLILRAITNVSGGVFWRLMVGTLVMLAAGYAGEAGYISPLIGFVVGMAGWAYILYEIFYGEAGKVASDQAPESVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTGCCCCTGTTGATGATCGAATTCTATCTCATCTTAAGGGCG---------ATC---ACAAATGTCTCTGGT---GGCGTG------------------------------------TTTTGGCGC---TTAATGGTCGGCACTTTGGTCATGCTTGCAGCAGGATATGCAGGTGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGCCCA------------------TTGATCGGA---TTTGTCGTGGGCATGGCCGGTTGGGCATATATTCTTTATGAAATT---------------TTT------TAT---GGAGAAGCTGGGAAGGTGGCCTCAGAT------CAA---GCGCCTGAATCAGTA---CAA---AGT---GCA---TTT---TCA---ACAATG---CGTTGGATCGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LMVGTLVMLAAGYAGE---A------G--Y-----------I----------------------SP------LIG-FVVGMAGWAYILYEI-----F--Y-GEAGKVASD--Q-APESV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927070 [III-Alpha4-c] PRGD_OTU005a_545d9673a833f130e30a97577d40d2cb gb|KJ927070| PRGD_OTU005a_545d9673a833f130e30a97577d40d2cb, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_545d9673a833f130e30a97577d40d2cb, putative proteorhodopsin gene, partial cds. KJ927070 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419) CTGATCACAGTTCCGTTGTTGATGATAGAATTCTATCTCATCTTGAGAGCGATCACGAATGTCTCTGGCGGTGTGTTCTGGCGCTTAATGGTCGGCACATTGGTCATGCTTGCAGCAGGATATGCAGGTGAAGCCGGCTACATCAGCCCGCTGATCGGATTTGTAGTGGGAATGGCCGGTTGGGCATACATTCTTTATGAAATCTTCTTTGGCGAAGCTGGTCAGGTGGCATCAGATCAAGCACCTGAATCAGTACAAAGCGCATTTTCAACAATGCGTTGGATTGTGACCATT LITVPLLMIEFYLILRAITNVSGGVFWRLMVGTLVMLAAGYAGEAGYISPLIGFVVGMAGWAYILYEIFFGEAGQVASDQAPESVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTTCCGTTGTTGATGATAGAATTCTATCTCATCTTGAGAGCG---------ATC---ACGAATGTCTCTGGC---GGTGTG------------------------------------TTCTGGCGC---TTAATGGTCGGCACATTGGTCATGCTTGCAGCAGGATATGCAGGTGAA---------GCC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGCCCG------------------CTGATCGGA---TTTGTAGTGGGAATGGCCGGTTGGGCATACATTCTTTATGAAATC---------------TTC------TTT---GGCGAAGCTGGTCAGGTGGCATCAGAT------CAA---GCACCTGAATCAGTA---CAA---AGC---GCA---TTT---TCA---ACAATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LMVGTLVMLAAGYAGE---A------G--Y-----------I----------------------SP------LIG-FVVGMAGWAYILYEI-----F--F-GEAGQVASD--Q-APESV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927073 [III-Alpha4-c] PRGD_OTU005a_7d5791e58ab050c159cf47c2ae42613a gb|KJ927073| PRGD_OTU005a_7d5791e58ab050c159cf47c2ae42613a, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_7d5791e58ab050c159cf47c2ae42613a, putative proteorhodopsin gene, partial cds. KJ927073 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTGATCACGGTGCCACTTCTGATGATTGAGTTCTACTTGATCCTGAGAGCCATCACTGCTGTATCCGGTGGTGTTTTCTGGCGCTTGATGATCGGTACTTTGGTTATGCTTGCAGCAGGTTATGCAGGTGAAGCTGGCTACATCAGTCCGCTGATTGGATTTATAGTTGGAATGGCCGGCTGGGCATATATCCTCTATGAAATCTTCTTCGGTGAAGCTGGGCAGGTGGCGTCAGATCAAGCTCCTGAGTCAGTGCAAAGTGCGTTTTCAACCATGCGCTGGATCGTAACCATT LITVPLLMIEFYLILRAITAVSGGVFWRLMIGTLVMLAAGYAGEAGYISPLIGFIVGMAGWAYILYEIFFGEAGQVASDQAPESVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACGGTGCCACTTCTGATGATTGAGTTCTACTTGATCCTGAGAGCC---------ATC---ACTGCTGTATCCGGT---GGTGTT------------------------------------TTCTGGCGC---TTGATGATCGGTACTTTGGTTATGCTTGCAGCAGGTTATGCAGGTGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGTCCG------------------CTGATTGGA---TTTATAGTTGGAATGGCCGGCTGGGCATATATCCTCTATGAAATC---------------TTC------TTC---GGTGAAGCTGGGCAGGTGGCGTCAGAT------CAA---GCTCCTGAGTCAGTG---CAA---AGT---GCG---TTT---TCA---ACCATG---CGCTGGATCGTAACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GV------------FWR-LMIGTLVMLAAGYAGE---A------G--Y-----------I----------------------SP------LIG-FIVGMAGWAYILYEI-----F--F-GEAGQVASD--Q-APESV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927077 [III-Alpha4-c] PRGD_OTU005a_852650eb8b95b62e0482f572652a00b1 gb|KJ927077| PRGD_OTU005a_852650eb8b95b62e0482f572652a00b1, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_852650eb8b95b62e0482f572652a00b1, putative proteorhodopsin gene, partial cds. KJ927077 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185), Mediterranean Sea (33.762, 29.175), Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTGATCACGGTGCCACTTCTGATGATTGAGTTCTACTTGATCCTGAGAGCCATCACTGCAGTATCCGGTGGTGTTTTCTGGCGCTTGATGATCGGTACTTTGGTTATGCTTGCAGCAGGTTATGCAGGTGAAGCTGGCTACATCAGCCCGCTGATTGGATTTATAGTTGGAATGGCCGGCTGGGCATATATCCTTTATGAAATCTTCTTCGGTGAAGCTGGGCAGGTGGCGTCAGATCAAGCTCCTGAGTCAGTGCAAAGTGCGTTTTCAACCATGCGCTGGATCGTAACCATT LITVPLLMIEFYLILRAITAVSGGVFWRLMIGTLVMLAAGYAGEAGYISPLIGFIVGMAGWAYILYEIFFGEAGQVASDQAPESVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACGGTGCCACTTCTGATGATTGAGTTCTACTTGATCCTGAGAGCC---------ATC---ACTGCAGTATCCGGT---GGTGTT------------------------------------TTCTGGCGC---TTGATGATCGGTACTTTGGTTATGCTTGCAGCAGGTTATGCAGGTGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGCCCG------------------CTGATTGGA---TTTATAGTTGGAATGGCCGGCTGGGCATATATCCTTTATGAAATC---------------TTC------TTC---GGTGAAGCTGGGCAGGTGGCGTCAGAT------CAA---GCTCCTGAGTCAGTG---CAA---AGT---GCG---TTT---TCA---ACCATG---CGCTGGATCGTAACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GV------------FWR-LMIGTLVMLAAGYAGE---A------G--Y-----------I----------------------SP------LIG-FIVGMAGWAYILYEI-----F--F-GEAGQVASD--Q-APESV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927060 [III-Alpha4-c] PRGD_OTU005a_2e0d8e27fff7435a78a5f21fb71358b7 gb|KJ927060| PRGD_OTU005a_2e0d8e27fff7435a78a5f21fb71358b7, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_2e0d8e27fff7435a78a5f21fb71358b7, putative proteorhodopsin gene, partial cds. KJ927060 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTCATCACAGTTCCATTGTTGATGGTTGAGTTCTATCTTATCCTGCGGGCTATCACAAATGTGTCCGGTGGCGTTTTCTGGCGCTTGATGATCGGGACATTGGTAATGTTGTCGGCCGGTTATGCCGGTGAAGCAGGATACATCAGCCCGCTAATTGGTTTTATAGTTGGAATGGCCGGATGGGCCTATATCCTTTATGAAATCTTCTTTGGCGAAGCTGGTCAGGTGGCGTCAGATCAGGCCCCAGAATCAGTCCAAAACGCTTTCTCAACAATGCGTTGGATTGTGACCATT LITVPLLMVEFYLILRAITNVSGGVFWRLMIGTLVMLSAGYAGEAGYISPLIGFIVGMAGWAYILYEIFFGEAGQVASDQAPESVQNAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTTCCATTGTTGATGGTTGAGTTCTATCTTATCCTGCGGGCT---------ATC---ACAAATGTGTCCGGT---GGCGTT------------------------------------TTCTGGCGC---TTGATGATCGGGACATTGGTAATGTTGTCGGCCGGTTATGCCGGTGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AGCCCG------------------CTAATTGGT---TTTATAGTTGGAATGGCCGGATGGGCCTATATCCTTTATGAAATC---------------TTC------TTT---GGCGAAGCTGGTCAGGTGGCGTCAGAT------CAG---GCCCCAGAATCAGTC---CAA---AAC---GCT---TTC---TCA---ACAATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GV------------FWR-LMIGTLVMLSAGYAGE---A------G--Y-----------I----------------------SP------LIG-FIVGMAGWAYILYEI-----F--F-GEAGQVASD--Q-APESV-Q-N-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927086 [III-Alpha4-c] PRGD_OTU005a_dc6581cfdfbaa8ef2549dfa37b4ee581 gb|KJ927086| PRGD_OTU005a_dc6581cfdfbaa8ef2549dfa37b4ee581, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_dc6581cfdfbaa8ef2549dfa37b4ee581, putative proteorhodopsin gene, partial cds. KJ927086 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) CTCATCACAGTTCCATTGTTGATGGTTGAGTTCTATCTTATCCTGCGGGCTATCACAAATGTATCCGGTGGCGTTTTCTGGCGCTTGATGATCGGGACATTGGTAATGCTGTCGGCCGGTTATGCCGGTGAAGCAGGATACATCAGCCCGCTAATTGGTTTTATAGTTGGAATGGCCGGATGGGCCTATATCCTTTATGAAATCTTCTTTGGCGAAGCTGGTCAGGTGGCGTCAGATCAGGCCCCAGAATCAGTCCAAAACGCTTTCTCAACAATGCGTTGGATTGTGACCATT LITVPLLMVEFYLILRAITNVSGGVFWRLMIGTLVMLSAGYAGEAGYISPLIGFIVGMAGWAYILYEIFFGEAGQVASDQAPESVQNAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTTCCATTGTTGATGGTTGAGTTCTATCTTATCCTGCGGGCT---------ATC---ACAAATGTATCCGGT---GGCGTT------------------------------------TTCTGGCGC---TTGATGATCGGGACATTGGTAATGCTGTCGGCCGGTTATGCCGGTGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AGCCCG------------------CTAATTGGT---TTTATAGTTGGAATGGCCGGATGGGCCTATATCCTTTATGAAATC---------------TTC------TTT---GGCGAAGCTGGTCAGGTGGCGTCAGAT------CAG---GCCCCAGAATCAGTC---CAA---AAC---GCT---TTC---TCA---ACAATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GV------------FWR-LMIGTLVMLSAGYAGE---A------G--Y-----------I----------------------SP------LIG-FIVGMAGWAYILYEI-----F--F-GEAGQVASD--Q-APESV-Q-N-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927099 [III-Alpha4-c] PRGD_OTU005a_f9040e85aff9c1eec633675b23af8be1 gb|KJ927099| PRGD_OTU005a_f9040e85aff9c1eec633675b23af8be1, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_f9040e85aff9c1eec633675b23af8be1, putative proteorhodopsin gene, partial cds. KJ927099 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCATCACAGTTCCATTGTTGATGGTTGAGTTCTATCTTATCCTGCGGGCTATCACAAATGTATCCGGTGGCGTTTTCTGGCGCTTGATGATCGGGACGTTGGTAATGCTGTCGGCCGGTTATGCCGGTGAAGCAGGATACATCAGCCCGCTAATTGGTTTTGTAGTTGGAATGGCTGGGTGGGCCTATATCCTTTATGAAATCTTCTTTGGCGAAGCTGGTCAGGTGGCGTCAGATCAGGCCCCAGAATCAGTCCAAAACGCTTTCTCAACAATGCGTTGGATTGTGACCATT LITVPLLMVEFYLILRAITNVSGGVFWRLMIGTLVMLSAGYAGEAGYISPLIGFVVGMAGWAYILYEIFFGEAGQVASDQAPESVQNAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTTCCATTGTTGATGGTTGAGTTCTATCTTATCCTGCGGGCT---------ATC---ACAAATGTATCCGGT---GGCGTT------------------------------------TTCTGGCGC---TTGATGATCGGGACGTTGGTAATGCTGTCGGCCGGTTATGCCGGTGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AGCCCG------------------CTAATTGGT---TTTGTAGTTGGAATGGCTGGGTGGGCCTATATCCTTTATGAAATC---------------TTC------TTT---GGCGAAGCTGGTCAGGTGGCGTCAGAT------CAG---GCCCCAGAATCAGTC---CAA---AAC---GCT---TTC---TCA---ACAATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GV------------FWR-LMIGTLVMLSAGYAGE---A------G--Y-----------I----------------------SP------LIG-FVVGMAGWAYILYEI-----F--F-GEAGQVASD--Q-APESV-Q-N-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ929868 [III-Alpha4-c] PRGD_OTU319_otuREP_a1a132e8cf499f7145ebcd6a29ba23dc gb|KJ929868| PRGD_OTU319_otuREP_a1a132e8cf499f7145ebcd6a29ba23dc, putative proteorhodopsin gene, partial cds. PRGD_OTU319_otuREP_a1a132e8cf499f7145ebcd6a29ba23dc, putative proteorhodopsin gene, partial cds. KJ929868 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-33.28, 45.35) CTCATTACGGTGCCGCTACAGATGATCGAATTCTATCTGATCCTCACCGCGGTCGCAGTGATTTCGGGCGGCATATTCTGGCGCTTGCTGATCGGTACCATGATAATGCTTGCCGGTGGCTACGCCGGTGAGGCCGGATACATTGACCCGACTATTGGTTTCGTTATTGGGATGGCAGGCTGGGCCTACATTCTGTATGAAATTTTCTTTGGCGAAGCTGGTCAAGTTGCTTCGGATCAAGCACCGGAATCCGTTCAGACTGCATTCTCTTTGATGCGCTGGATTGTGACTGTT LITVPLQMIEFYLILTAVAVISGGIFWRLLIGTMIMLAGGYAGEAGYIDPTIGFVIGMAGWAYILYEIFFGEAGQVASDQAPESVQTAFSLMRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATTACGGTGCCGCTACAGATGATCGAATTCTATCTGATCCTCACCGCG---------GTC---GCAGTGATTTCGGGC---GGCATA------------------------------------TTCTGGCGC---TTGCTGATCGGTACCATGATAATGCTTGCCGGTGGCTACGCCGGTGAG---------GCC------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------GACCCG------------------ACTATTGGT---TTCGTTATTGGGATGGCAGGCTGGGCCTACATTCTGTATGAAATT---------------TTC------TTT---GGCGAAGCTGGTCAAGTTGCTTCGGAT------CAA---GCACCGGAATCCGTT---CAG---ACT---GCA---TTC---TCT---TTGATG---CGCTGGATTGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILTA---V-AVISG-GI------------FWR-LLIGTMIMLAGGYAGE---A------G--Y-----------I----------------------DP------TIG-FVIGMAGWAYILYEI-----F--F-GEAGQVASD--Q-APESV-Q-T-A-F-S-LM-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927058 [III-Alpha4-c] PRGD_OTU005a_1cf966b2d2aebd4f1c77f0b6bac6199b gb|KJ927058| PRGD_OTU005a_1cf966b2d2aebd4f1c77f0b6bac6199b, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_1cf966b2d2aebd4f1c77f0b6bac6199b, putative proteorhodopsin gene, partial cds. KJ927058 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683) CTGATCACAGTGCCACTGCTGATGGTAGAGTTCTATCTTATTCTGCGCGCGATCACCAATGTCTCTGGTGGCGTGTTCTGGCGTTTAATGATTGGTACGATGGTCATGTTGGCCGCAGGTTACATGGGCGAGGCCGGGTATATCAATGCGATGCTTGGTTTCATCATTGGAATGGCTGGTTGGGCTTATATTCTGTATGAAATCTTCTTGGGTGAAGCTGGTCAAGTGGCCTCCGAGCAAGCTCCGGAATCAGTTCAGTCTGCTTTTGTGACCATGCGTTGGATTGTGACCATT LITVPLLMVEFYLILRAITNVSGGVFWRLMIGTMVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFLGEAGQVASEQAPESVQSAFVTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTGCCACTGCTGATGGTAGAGTTCTATCTTATTCTGCGCGCG---------ATC---ACCAATGTCTCTGGT---GGCGTG------------------------------------TTCTGGCGT---TTAATGATTGGTACGATGGTCATGTTGGCCGCAGGTTACATGGGCGAG---------GCC------------------GGG------TAT---------------------------------ATC------------------------------------------------------------------AATGCG------------------ATGCTTGGT---TTCATCATTGGAATGGCTGGTTGGGCTTATATTCTGTATGAAATC---------------TTC------TTG---GGTGAAGCTGGTCAAGTGGCCTCCGAG------CAA---GCTCCGGAATCAGTT---CAG---TCT---GCT---TTT---GTG---ACCATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--L-GEAGQVASE--Q-APESV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927081 [III-Alpha4-c] PRGD_OTU005a_ac4b5ca18c46338d134983a06697aa5f gb|KJ927081| PRGD_OTU005a_ac4b5ca18c46338d134983a06697aa5f, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_ac4b5ca18c46338d134983a06697aa5f, putative proteorhodopsin gene, partial cds. KJ927081 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683) CTGATCACAGTGCCACTGCTGATGGTAGAGTTCTATCTTATTCTGCGCGCAATCACCAATGTCTCTGGTGGCGTGTTCTGGCGTTTGATGATCGGTACGATGGTCATGTTGGCCGCAGGTTACATGGGCGAGGCCGGGTATATCAATGCGATGCTTGGTTTCATCATTGGAATGGCTGGTTGGGCTTACATTCTGTATGAAATCTTCTTGGGTGAAGCTGGTCAAGTGGCCTCCGAGCAAGCTCCGGAATCAGTTCAGTCTGCTTTTGTGACCATGCGTTGGATTGTGACCATT LITVPLLMVEFYLILRAITNVSGGVFWRLMIGTMVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFLGEAGQVASEQAPESVQSAFVTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTGCCACTGCTGATGGTAGAGTTCTATCTTATTCTGCGCGCA---------ATC---ACCAATGTCTCTGGT---GGCGTG------------------------------------TTCTGGCGT---TTGATGATCGGTACGATGGTCATGTTGGCCGCAGGTTACATGGGCGAG---------GCC------------------GGG------TAT---------------------------------ATC------------------------------------------------------------------AATGCG------------------ATGCTTGGT---TTCATCATTGGAATGGCTGGTTGGGCTTACATTCTGTATGAAATC---------------TTC------TTG---GGTGAAGCTGGTCAAGTGGCCTCCGAG------CAA---GCTCCGGAATCAGTT---CAG---TCT---GCT---TTT---GTG---ACCATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--L-GEAGQVASE--Q-APESV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927092 [III-Alpha4-c] PRGD_OTU005a_e7566be413bb36283c77e94380e3a332 gb|KJ927092| PRGD_OTU005a_e7566be413bb36283c77e94380e3a332, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_e7566be413bb36283c77e94380e3a332, putative proteorhodopsin gene, partial cds. KJ927092 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) CTGATCACAGTGCCACTGCTGATGGTAGAGTTCTATCTCATCCTGCGCGCGATCACCAATGTCTCTGGTGGCGTGTTCTGGCGTTTGATGATCGGTACGATGGTCATGTTGGCCGCAGGTTACATGGGCGAGGCCGGGTATATCAATGCGATGCTTGGTTTCATCATCGGAATGGCTGGTTGGGCTTACATTCTGTATGAAATCTTCTTGGGTGAAGCTGGTCAAGTGGCCTCCGAGCAAGCGCCGGAATCAGTTCAGTCTGCTTTTGTGACCATGCGATGGATCGTGACCATT LITVPLLMVEFYLILRAITNVSGGVFWRLMIGTMVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFLGEAGQVASEQAPESVQSAFVTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTGCCACTGCTGATGGTAGAGTTCTATCTCATCCTGCGCGCG---------ATC---ACCAATGTCTCTGGT---GGCGTG------------------------------------TTCTGGCGT---TTGATGATCGGTACGATGGTCATGTTGGCCGCAGGTTACATGGGCGAG---------GCC------------------GGG------TAT---------------------------------ATC------------------------------------------------------------------AATGCG------------------ATGCTTGGT---TTCATCATCGGAATGGCTGGTTGGGCTTACATTCTGTATGAAATC---------------TTC------TTG---GGTGAAGCTGGTCAAGTGGCCTCCGAG------CAA---GCGCCGGAATCAGTT---CAG---TCT---GCT---TTT---GTG---ACCATG---CGATGGATCGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--L-GEAGQVASE--Q-APESV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927066 [III-Alpha4-c] PRGD_OTU005a_49ef6d0cd9b9d23b3c9255757f11b6f5 gb|KJ927066| PRGD_OTU005a_49ef6d0cd9b9d23b3c9255757f11b6f5, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_49ef6d0cd9b9d23b3c9255757f11b6f5, putative proteorhodopsin gene, partial cds. KJ927066 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683) CTGATCACAGTGCCACTGTTGATGGTAGAATTCTATCTCATCCTGCGCGCGATCACCAATGTCTCTGGTGGCGTGTTCTGGCGTTTGATGATCGGTACGATGGTCATGTTGGCCGCAGGTTACATGGGCGAGGCCGGGTATATCAATGCGATGCTTGGTTTCATCATCGGAATGGCTGGTTGGGCTTACATTCTGTATGAAATCTTCTTGGGTGAAGCTGGTCAAGTGGCCTCCGAGCAAGCTCCGGAATCAGTTCAGTCTGCTTTTGTGACCATGCGCTGGATTGTGACCATT LITVPLLMVEFYLILRAITNVSGGVFWRLMIGTMVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFLGEAGQVASEQAPESVQSAFVTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTGCCACTGTTGATGGTAGAATTCTATCTCATCCTGCGCGCG---------ATC---ACCAATGTCTCTGGT---GGCGTG------------------------------------TTCTGGCGT---TTGATGATCGGTACGATGGTCATGTTGGCCGCAGGTTACATGGGCGAG---------GCC------------------GGG------TAT---------------------------------ATC------------------------------------------------------------------AATGCG------------------ATGCTTGGT---TTCATCATCGGAATGGCTGGTTGGGCTTACATTCTGTATGAAATC---------------TTC------TTG---GGTGAAGCTGGTCAAGTGGCCTCCGAG------CAA---GCTCCGGAATCAGTT---CAG---TCT---GCT---TTT---GTG---ACCATG---CGCTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--L-GEAGQVASE--Q-APESV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927055 [III-Alpha4-c] PRGD_OTU005a_1615adcb3e5685d449c5456583b111b1 gb|KJ927055| PRGD_OTU005a_1615adcb3e5685d449c5456583b111b1, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_1615adcb3e5685d449c5456583b111b1, putative proteorhodopsin gene, partial cds. KJ927055 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175; 33.935, 18.508), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) CTGATCACAGTGCCACTGCTGATGGTAGAGTTCTATCTCATCCTGCGCGCGATCACCAATGTCTCTGGTGGCGTGTTCTGGCGTTTGATGATCGGTACGATGGTCATGTTGGCCGCAGGTTACATGGGCGAGGCCGGGTATATCAATGCGATGCTTGGTTTCATCATCGGAATGGCTGGTTGGGCTTACATTCTGTATGAAATCTTCTTGGGTGAAGCTGGTCAAGTGGCCTCCGAGCAAGCTCCGGAATCAGTTCAGTCTGCTTTTGTGACCATGCGTTGGATTGTGACCATT LITVPLLMVEFYLILRAITNVSGGVFWRLMIGTMVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFLGEAGQVASEQAPESVQSAFVTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTGCCACTGCTGATGGTAGAGTTCTATCTCATCCTGCGCGCG---------ATC---ACCAATGTCTCTGGT---GGCGTG------------------------------------TTCTGGCGT---TTGATGATCGGTACGATGGTCATGTTGGCCGCAGGTTACATGGGCGAG---------GCC------------------GGG------TAT---------------------------------ATC------------------------------------------------------------------AATGCG------------------ATGCTTGGT---TTCATCATCGGAATGGCTGGTTGGGCTTACATTCTGTATGAAATC---------------TTC------TTG---GGTGAAGCTGGTCAAGTGGCCTCCGAG------CAA---GCTCCGGAATCAGTT---CAG---TCT---GCT---TTT---GTG---ACCATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--L-GEAGQVASE--Q-APESV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927088 [III-Alpha4-c] PRGD_OTU005a_df4a1c4a03ebef16e83f27a306a0297a gb|KJ927088| PRGD_OTU005a_df4a1c4a03ebef16e83f27a306a0297a, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_df4a1c4a03ebef16e83f27a306a0297a, putative proteorhodopsin gene, partial cds. KJ927088 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; ; 67.49, -168.12), Mediterranean Sea (38.6308, 7.9097) CTGATCACAGTGCCACTGCTGATGGTAGAGTTCTATCTCATCCTACGCGCGATCACCAACGTCTCTGGTGGCGTGTTCTGGCGTTTGATGATCGGTACGATGGTCATGTTGGCCGCAGGTTACATGGGCGAAGCCGGGTATATCAATGCGATGCTTGGTTTCATCATCGGAATGGCTGGCTGGGCTTACATTCTGTATGAAATCTTCTTGGGTGAAGCTGGCCAAGTGGCCTCCGAGCAAGCTCCGGAATCAGTTCAGTCTGCTTTTGTGACCATGCGTTGGATTGTGACTATT LITVPLLMVEFYLILRAITNVSGGVFWRLMIGTMVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFLGEAGQVASEQAPESVQSAFVTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTGCCACTGCTGATGGTAGAGTTCTATCTCATCCTACGCGCG---------ATC---ACCAACGTCTCTGGT---GGCGTG------------------------------------TTCTGGCGT---TTGATGATCGGTACGATGGTCATGTTGGCCGCAGGTTACATGGGCGAA---------GCC------------------GGG------TAT---------------------------------ATC------------------------------------------------------------------AATGCG------------------ATGCTTGGT---TTCATCATCGGAATGGCTGGCTGGGCTTACATTCTGTATGAAATC---------------TTC------TTG---GGTGAAGCTGGCCAAGTGGCCTCCGAG------CAA---GCTCCGGAATCAGTT---CAG---TCT---GCT---TTT---GTG---ACCATG---CGTTGGATTGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--L-GEAGQVASE--Q-APESV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927056 [III-Alpha4-c] PRGD_OTU005a_17280c1dbf094b463c4d23ad553b8607 gb|KJ927056| PRGD_OTU005a_17280c1dbf094b463c4d23ad553b8607, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_17280c1dbf094b463c4d23ad553b8607, putative proteorhodopsin gene, partial cds. KJ927056 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (72.0542, -130.8781; ; 67.49, -168.12), English Channel (48.7717, -3.9683) CTGATCACAGTGCCACTGTTGATGGTAGAGTTCTATCTCATCCTACGCGCGATCACCAATGTCTCTGGTGGCGTGTTCTGGCGTTTGATGATCGGTACGATGGTCATGTTGGCCGCAGGTTACATGGGCGAAGCCGGGTATATCAATGCGATGCTCGGTTTCATCATCGGAATGGCTGGCTGGGCTTACATTCTGTATGAAATCTTCTTGGGTGAAGCTGGTCAAGTCGCTTCCGAGCAAGCTCCGGAATCAGTTCAGTCTGCTTTTGTGACCATGCGTTGGATTGTGACCATT LITVPLLMVEFYLILRAITNVSGGVFWRLMIGTMVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFLGEAGQVASEQAPESVQSAFVTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTGCCACTGTTGATGGTAGAGTTCTATCTCATCCTACGCGCG---------ATC---ACCAATGTCTCTGGT---GGCGTG------------------------------------TTCTGGCGT---TTGATGATCGGTACGATGGTCATGTTGGCCGCAGGTTACATGGGCGAA---------GCC------------------GGG------TAT---------------------------------ATC------------------------------------------------------------------AATGCG------------------ATGCTCGGT---TTCATCATCGGAATGGCTGGCTGGGCTTACATTCTGTATGAAATC---------------TTC------TTG---GGTGAAGCTGGTCAAGTCGCTTCCGAG------CAA---GCTCCGGAATCAGTT---CAG---TCT---GCT---TTT---GTG---ACCATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--L-GEAGQVASE--Q-APESV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927091 [III-Alpha4-c] PRGD_OTU005a_e2738b4c6246661cbb5c48adfd3fb207 gb|KJ927091| PRGD_OTU005a_e2738b4c6246661cbb5c48adfd3fb207, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_e2738b4c6246661cbb5c48adfd3fb207, putative proteorhodopsin gene, partial cds. KJ927091 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -33.28, 45.35) CTGATCACAGTGCCACTGCTGATGGTAGAGTTCTATCTCATCCTACGTGCGATCACCAATGTCTCTGGTGGCGTGTTCTGGCGTTTGATGATCGGTACGATGGTCATGTTGGCCGCAGGTTACATGGGCGAGGCCGGGTATATCAATGCGATGCTTGGTTTCATCATCGGAATGGCTGGTTGGGCTTACATCCTGTATGAAATCTTCTTGGGTGAAGCTGGTCAAGTGGCCTCCGAGCAGGCTCCGGAATCAGTTCAGTCTGCTTTTGTGACCATGCGTTGGATTGTGACTATT LITVPLLMVEFYLILRAITNVSGGVFWRLMIGTMVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFLGEAGQVASEQAPESVQSAFVTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTGCCACTGCTGATGGTAGAGTTCTATCTCATCCTACGTGCG---------ATC---ACCAATGTCTCTGGT---GGCGTG------------------------------------TTCTGGCGT---TTGATGATCGGTACGATGGTCATGTTGGCCGCAGGTTACATGGGCGAG---------GCC------------------GGG------TAT---------------------------------ATC------------------------------------------------------------------AATGCG------------------ATGCTTGGT---TTCATCATCGGAATGGCTGGTTGGGCTTACATCCTGTATGAAATC---------------TTC------TTG---GGTGAAGCTGGTCAAGTGGCCTCCGAG------CAG---GCTCCGGAATCAGTT---CAG---TCT---GCT---TTT---GTG---ACCATG---CGTTGGATTGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--L-GEAGQVASE--Q-APESV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927078 [III-Alpha4-c] PRGD_OTU005a_88afbbffe2ff24206bfbdc813a56c7bc gb|KJ927078| PRGD_OTU005a_88afbbffe2ff24206bfbdc813a56c7bc, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_88afbbffe2ff24206bfbdc813a56c7bc, putative proteorhodopsin gene, partial cds. KJ927078 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) CTGATCACAGTGCCACTGCTGATGGTAGAGTTCTATCTCATCCTACGCGCGATCACCAATGTCTCTGGTGGCGTGTTCTGGCGTTTGATGATCGGTACGATGGTCATGTTGGCCGCAGGTTACATGGGCGAGGCCGGGTATATCAATGCGATGCTTGGTTTCATCATTGGAATGGCCGGTTGGGCTTACATCCTGTATGAAATCTTCTTGGGTGAAGCTGGTCAAGTGGCCTCCGAGCAGGCTCCGGAATCAGTTCAGTCTGCTTTTGTGACCATGCGTTGGATTGTGACTATT LITVPLLMVEFYLILRAITNVSGGVFWRLMIGTMVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFLGEAGQVASEQAPESVQSAFVTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTGCCACTGCTGATGGTAGAGTTCTATCTCATCCTACGCGCG---------ATC---ACCAATGTCTCTGGT---GGCGTG------------------------------------TTCTGGCGT---TTGATGATCGGTACGATGGTCATGTTGGCCGCAGGTTACATGGGCGAG---------GCC------------------GGG------TAT---------------------------------ATC------------------------------------------------------------------AATGCG------------------ATGCTTGGT---TTCATCATTGGAATGGCCGGTTGGGCTTACATCCTGTATGAAATC---------------TTC------TTG---GGTGAAGCTGGTCAAGTGGCCTCCGAG------CAG---GCTCCGGAATCAGTT---CAG---TCT---GCT---TTT---GTG---ACCATG---CGTTGGATTGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--L-GEAGQVASE--Q-APESV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927093 [III-Alpha4-c] PRGD_OTU005a_ea8474ff627f6e87e028f48a57c4826e gb|KJ927093| PRGD_OTU005a_ea8474ff627f6e87e028f48a57c4826e, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_ea8474ff627f6e87e028f48a57c4826e, putative proteorhodopsin gene, partial cds. KJ927093 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683) CTGATCACAGTGCCACTGCTGATGGTAGAGTTCTATCTTATCCTACGCGCGATCACCAATGTCTCTGGTGGCGTGTTCTGGCGTTTGATGATCGGTACGATGGTCATGTTGGCTGCAGGTTACATGGGCGAGGCCGGGTATATCAATGCGATGCTTGGTTTCATCATCGGAATGGCTGGTTGGGCTTACATTCTGTATGAAATCTTCTTGGGCGAAGCTGGTCAAGTGGCCTCCGAGCAAGCTCCGGAATCAGTTCAGTCTGCTTTTGTGACCATGCGTTGGATTGTGACCATT LITVPLLMVEFYLILRAITNVSGGVFWRLMIGTMVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFLGEAGQVASEQAPESVQSAFVTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTGCCACTGCTGATGGTAGAGTTCTATCTTATCCTACGCGCG---------ATC---ACCAATGTCTCTGGT---GGCGTG------------------------------------TTCTGGCGT---TTGATGATCGGTACGATGGTCATGTTGGCTGCAGGTTACATGGGCGAG---------GCC------------------GGG------TAT---------------------------------ATC------------------------------------------------------------------AATGCG------------------ATGCTTGGT---TTCATCATCGGAATGGCTGGTTGGGCTTACATTCTGTATGAAATC---------------TTC------TTG---GGCGAAGCTGGTCAAGTGGCCTCCGAG------CAA---GCTCCGGAATCAGTT---CAG---TCT---GCT---TTT---GTG---ACCATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--L-GEAGQVASE--Q-APESV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927065 [III-Alpha4-c] PRGD_OTU005a_42c4ccd9ef64877945186b856e97c947 gb|KJ927065| PRGD_OTU005a_42c4ccd9ef64877945186b856e97c947, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_42c4ccd9ef64877945186b856e97c947, putative proteorhodopsin gene, partial cds. KJ927065 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (67.49, -168.12) CTGATCACCGTGCCACTGCTGATGGTAGAATTCTATCTTATCCTACGCGCGATCACCAATGTCTCTGGTGGTGTGTTCTGGCGTTTGATGATCGGTACGATGGTCATGTTGGCCGCAGGTTACATGGGCGAGGCCGGTTATATCAATGCGATGCTTGGTTTCATCATCGGAATGGCTGGTTGGGCTTACATTCTGTATGAAATCTTCTTGGGTGAAGCTGGTCAAGTGGCCTCCGAGCAAGCTCCGGAATCAGTTCAGTCTGCTTTTGTGACCATGCGTTGGATTGTGACCATT LITVPLLMVEFYLILRAITNVSGGVFWRLMIGTMVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFLGEAGQVASEQAPESVQSAFVTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTGCCACTGCTGATGGTAGAATTCTATCTTATCCTACGCGCG---------ATC---ACCAATGTCTCTGGT---GGTGTG------------------------------------TTCTGGCGT---TTGATGATCGGTACGATGGTCATGTTGGCCGCAGGTTACATGGGCGAG---------GCC------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------AATGCG------------------ATGCTTGGT---TTCATCATCGGAATGGCTGGTTGGGCTTACATTCTGTATGAAATC---------------TTC------TTG---GGTGAAGCTGGTCAAGTGGCCTCCGAG------CAA---GCTCCGGAATCAGTT---CAG---TCT---GCT---TTT---GTG---ACCATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--L-GEAGQVASE--Q-APESV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927071 [III-Alpha4-c] PRGD_OTU005a_59d5fa925b35b0be9c99b942d487e40e gb|KJ927071| PRGD_OTU005a_59d5fa925b35b0be9c99b942d487e40e, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_59d5fa925b35b0be9c99b942d487e40e, putative proteorhodopsin gene, partial cds. KJ927071 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12) CTGATCACAGTGCCTCTGCTGATGGTAGAGTTCTATCTTATCCTGCGCGCGATCACCAATGTTTCTGGTGGCGTGTTCTGGCGTTTGATGATCGGTACGATGGTCATGTTGGCCGCAGGTTACATGGGCGAGGCCGGGTATATCAATGCGATGCTTGGTTTCATCATCGGAATGGCTGGTTGGGCTTACATTCTGTATGAAATCTTCTTGGGTGAAGCTGGTCAAGTGGCCTCCGAGCAAGCTCCAGAATCAGTTCAGTCTGCTTTTGTGACCATGCGTTGGATTGTGACCATT LITVPLLMVEFYLILRAITNVSGGVFWRLMIGTMVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFLGEAGQVASEQAPESVQSAFVTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTGCCTCTGCTGATGGTAGAGTTCTATCTTATCCTGCGCGCG---------ATC---ACCAATGTTTCTGGT---GGCGTG------------------------------------TTCTGGCGT---TTGATGATCGGTACGATGGTCATGTTGGCCGCAGGTTACATGGGCGAG---------GCC------------------GGG------TAT---------------------------------ATC------------------------------------------------------------------AATGCG------------------ATGCTTGGT---TTCATCATCGGAATGGCTGGTTGGGCTTACATTCTGTATGAAATC---------------TTC------TTG---GGTGAAGCTGGTCAAGTGGCCTCCGAG------CAA---GCTCCAGAATCAGTT---CAG---TCT---GCT---TTT---GTG---ACCATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--L-GEAGQVASE--Q-APESV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927054 [III-Alpha4-c] PRGD_OTU005a_1605f35c5b875a8bc3c3b9c8348d84af gb|KJ927054| PRGD_OTU005a_1605f35c5b875a8bc3c3b9c8348d84af, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_1605f35c5b875a8bc3c3b9c8348d84af, putative proteorhodopsin gene, partial cds. KJ927054 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTGATCACAGTGCCGCTGTTGATGGTAGAATTCTATCTGATCTTGCGTGCGATCACCACCGTCTCTGGTGGCGTTTTCTGGCGCTTGATGATCGGTACGATGGTCATGTTGGCCGCAGGTTACATGGGCGAGGCAGGGTACATCAACGCAATGCTTGGCTTTATCATCGGGATGGCTGGTTGGGCCTATATTCTGTATGAAATCTTCATGGGTGAAGCGGGTCAAGTTGCGTCCGAACAGGCACCTGAATCTGTACAGTCAGCCTTTGTGACAATGCGTTGGATTGTGACCATT LITVPLLMVEFYLILRAITTVSGGVFWRLMIGTMVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFMGEAGQVASEQAPESVQSAFVTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCGCTGTTGATGGTAGAATTCTATCTGATCTTGCGTGCG---------ATC---ACCACCGTCTCTGGT---GGCGTT------------------------------------TTCTGGCGC---TTGATGATCGGTACGATGGTCATGTTGGCCGCAGGTTACATGGGCGAG---------GCA------------------GGG------TAC---------------------------------ATC------------------------------------------------------------------AACGCA------------------ATGCTTGGC---TTTATCATCGGGATGGCTGGTTGGGCCTATATTCTGTATGAAATC---------------TTC------ATG---GGTGAAGCGGGTCAAGTTGCGTCCGAA------CAG---GCACCTGAATCTGTA---CAG---TCA---GCC---TTT---GTG---ACAATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TTVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--M-GEAGQVASE--Q-APESV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927052 [III-Alpha4-c] PRGD_OTU005a_100b912f5b5a5b3d36a8e0b6fe70bd99 gb|KJ927052| PRGD_OTU005a_100b912f5b5a5b3d36a8e0b6fe70bd99, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_100b912f5b5a5b3d36a8e0b6fe70bd99, putative proteorhodopsin gene, partial cds. KJ927052 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) TTGATCACAGTGCCGCTGTTGATGGTAGAATTCTATCTGATCTTGCGTGCGATCACCACGGTCTCTGGCGGCGTTTTCTGGCGCTTGATGATCGGTACGATGGTCATGCTGGCCGCAGGTTACATGGGCGAGGCAGGGTACATCAACGCAATGCTTGGCTTTATCATCGGGATGGCTGGTTGGGCCTATATTCTGTATGAAATCTTCATGGGTGAAGCGGGTCAAGTTGCGTCCGAACAGGCACCTGAATCTGTACAGTCAGCCTTTGTGACAATGCGTTGGATTGTGACCATT LITVPLLMVEFYLILRAITTVSGGVFWRLMIGTMVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFMGEAGQVASEQAPESVQSAFVTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCGCTGTTGATGGTAGAATTCTATCTGATCTTGCGTGCG---------ATC---ACCACGGTCTCTGGC---GGCGTT------------------------------------TTCTGGCGC---TTGATGATCGGTACGATGGTCATGCTGGCCGCAGGTTACATGGGCGAG---------GCA------------------GGG------TAC---------------------------------ATC------------------------------------------------------------------AACGCA------------------ATGCTTGGC---TTTATCATCGGGATGGCTGGTTGGGCCTATATTCTGTATGAAATC---------------TTC------ATG---GGTGAAGCGGGTCAAGTTGCGTCCGAA------CAG---GCACCTGAATCTGTA---CAG---TCA---GCC---TTT---GTG---ACAATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TTVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--M-GEAGQVASE--Q-APESV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927097 [III-Alpha4-c] PRGD_OTU005a_f41efc6eeb3bd7470d4c43a73b969ee3 gb|KJ927097| PRGD_OTU005a_f41efc6eeb3bd7470d4c43a73b969ee3, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_f41efc6eeb3bd7470d4c43a73b969ee3, putative proteorhodopsin gene, partial cds. KJ927097 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 01-juil-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683) TTGATCACAGTGCCGCTGTTGATGGTAGAATTCTATCTGATCTTGCGCGCGATCACCACGGTCTCTGGTGGCGTTTTCTGGCGCTTGATGATTGGTACGATGGTCATGTTGGCCGCAGGTTACATGGGCGAGGCACGGTACATCAACGCAATGCTTGGTTTTATCATCGGGATGGCTGGTTGGGCCTATATTCTGTATGAAATCTTCATGGGTGAAGCGGGTCAAGTTGCGTCCGAACAGGCACCTGAATCTGTACAGTCAGCCTTTGTGACAATGCGTTGGATTGTAACCATT LITVPLLMVEFYLILRAITTVSGGVFWRLMIGTMVMLAAGYMGEARYINAMLGFIIGMAGWAYILYEIFMGEAGQVASEQAPESVQSAFVTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCGCTGTTGATGGTAGAATTCTATCTGATCTTGCGCGCG---------ATC---ACCACGGTCTCTGGT---GGCGTT------------------------------------TTCTGGCGC---TTGATGATTGGTACGATGGTCATGTTGGCCGCAGGTTACATGGGCGAG---------GCA------------------CGG------TAC---------------------------------ATC------------------------------------------------------------------AACGCA------------------ATGCTTGGT---TTTATCATCGGGATGGCTGGTTGGGCCTATATTCTGTATGAAATC---------------TTC------ATG---GGTGAAGCGGGTCAAGTTGCGTCCGAA------CAG---GCACCTGAATCTGTA---CAG---TCA---GCC---TTT---GTG---ACAATG---CGTTGGATTGTAACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TTVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------R--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--M-GEAGQVASE--Q-APESV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927087 [III-Alpha4-c] PRGD_OTU005a_def970aba49df8164fbe640c0e053597 gb|KJ927087| PRGD_OTU005a_def970aba49df8164fbe640c0e053597, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_def970aba49df8164fbe640c0e053597, putative proteorhodopsin gene, partial cds. KJ927087 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683) CTGATCACAGTGCCGCTGTTGATGGTAGAATTCTATCTGATCTTGCGCGCGATCACTACCGTCTCTGGTGGCGTTTTCTGGCGCTTGATGATCGGTACGATGGTCATGTTGGCAGCAGGTTACATGGGCGAGGCAGGGTACATCAACGCAATGCTTGGCTTTATCATCGGGATGGCCGGTTGGGCCTATATTCTGTATGAAATCTTCATGGGTGAAGCGGGTCAAGTTGCGTCCGAACAGGCACCTGAATCTGTACAGTCAGCCTTTGTGACAATGCGTTGGATTGTGACCATT LITVPLLMVEFYLILRAITTVSGGVFWRLMIGTMVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFMGEAGQVASEQAPESVQSAFVTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTGCCGCTGTTGATGGTAGAATTCTATCTGATCTTGCGCGCG---------ATC---ACTACCGTCTCTGGT---GGCGTT------------------------------------TTCTGGCGC---TTGATGATCGGTACGATGGTCATGTTGGCAGCAGGTTACATGGGCGAG---------GCA------------------GGG------TAC---------------------------------ATC------------------------------------------------------------------AACGCA------------------ATGCTTGGC---TTTATCATCGGGATGGCCGGTTGGGCCTATATTCTGTATGAAATC---------------TTC------ATG---GGTGAAGCGGGTCAAGTTGCGTCCGAA------CAG---GCACCTGAATCTGTA---CAG---TCA---GCC---TTT---GTG---ACAATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TTVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--M-GEAGQVASE--Q-APESV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927085 [III-Alpha4-c] PRGD_OTU005a_d5ade7669cd31fe73f913a6e71a4c330 gb|KJ927085| PRGD_OTU005a_d5ade7669cd31fe73f913a6e71a4c330, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_d5ade7669cd31fe73f913a6e71a4c330, putative proteorhodopsin gene, partial cds. KJ927085 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTGATCACAGTGCCGCTGTTGATGGTAGAATTCTATCTGATCTTGCGCGCGATCACCGCCGTCTCTGGTGGCGTTTTCTGGCGCTTGATGATCGGTACGACGGTCATGTTGGCCGCAGGTTACATGGGCGAGGCTGGGTACATCAACGCAATGCTTGGCTTTATCATCGGGATGGCTGGTTGGGCCTATATTCTGTATGAAATCTTCATGGGTGAAGCTGGTCAAGTTGCGTCCGAACAGGCACCTGAATCTGTACAGTCAGCCTTTGTGACAATGCGTTGGATTGTGACCATT LITVPLLMVEFYLILRAITAVSGGVFWRLMIGTTVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFMGEAGQVASEQAPESVQSAFVTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCGCTGTTGATGGTAGAATTCTATCTGATCTTGCGCGCG---------ATC---ACCGCCGTCTCTGGT---GGCGTT------------------------------------TTCTGGCGC---TTGATGATCGGTACGACGGTCATGTTGGCCGCAGGTTACATGGGCGAG---------GCT------------------GGG------TAC---------------------------------ATC------------------------------------------------------------------AACGCA------------------ATGCTTGGC---TTTATCATCGGGATGGCTGGTTGGGCCTATATTCTGTATGAAATC---------------TTC------ATG---GGTGAAGCTGGTCAAGTTGCGTCCGAA------CAG---GCACCTGAATCTGTA---CAG---TCA---GCC---TTT---GTG---ACAATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTTVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--M-GEAGQVASE--Q-APESV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927095 [III-Alpha4-c] PRGD_OTU005a_edaa73094080feb650fc1370fa0bd222 gb|KJ927095| PRGD_OTU005a_edaa73094080feb650fc1370fa0bd222, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_edaa73094080feb650fc1370fa0bd222, putative proteorhodopsin gene, partial cds. KJ927095 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) TTAATCACAGTGCCGTTATTGATGGTAGAATTCTATCTTATCTTGCGCGCGATCACCACCGTCTCTGGTGGCGTTTTCTGGCGCTTGATGATCGGTACGATGGTCATGTTGGCCGCAGGTTACATGGGCGAGGCCGGGTACATCAACGCAATGCTTGGCTTTATCATCGGGATGGCTGGTTGGGCCTATATTCTGTATGAAATCTTCATGGGTGAAGCGGGTCAAGTTGCGTCAGAGCAGGCGCCTGAGTCTGTACAGTCAGCCTTTGTGACCATGCGTTGGATTGTGACCATT LITVPLLMVEFYLILRAITTVSGGVFWRLMIGTMVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFMGEAGQVASEQAPESVQSAFVTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTGCCGTTATTGATGGTAGAATTCTATCTTATCTTGCGCGCG---------ATC---ACCACCGTCTCTGGT---GGCGTT------------------------------------TTCTGGCGC---TTGATGATCGGTACGATGGTCATGTTGGCCGCAGGTTACATGGGCGAG---------GCC------------------GGG------TAC---------------------------------ATC------------------------------------------------------------------AACGCA------------------ATGCTTGGC---TTTATCATCGGGATGGCTGGTTGGGCCTATATTCTGTATGAAATC---------------TTC------ATG---GGTGAAGCGGGTCAAGTTGCGTCAGAG------CAG---GCGCCTGAGTCTGTA---CAG---TCA---GCC---TTT---GTG---ACCATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TTVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--M-GEAGQVASE--Q-APESV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927075 [III-Alpha4-c] PRGD_OTU005a_8023d9f18dcacd1e4df2b5c25f49da1b gb|KJ927075| PRGD_OTU005a_8023d9f18dcacd1e4df2b5c25f49da1b, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_8023d9f18dcacd1e4df2b5c25f49da1b, putative proteorhodopsin gene, partial cds. KJ927075 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) TTGATCACAGTGCCGCTGTTGATGGTAGAATTCTATCTTATCTTGCGCGCGATCACCAACGTCTCTGGTGGCGTTTTCTGGCGCTTGATGATCGGTACAATGGTCATGCTGGCCGCAGGTTACATGGGCGAGGCAGGGTACATCAATGCAATGCTCGGCTTTATCATTGGGATGGCTGGTTGGGCCTATATTCTATATGAAATCTTCATGGGTGAAGCGGGTCAAGTTGCGTCAGAGCAGGCACCTGAGTCTGTACAGTCAGCCTTTGTGACCATGCGTTGGATTGTGACCATT LITVPLLMVEFYLILRAITNVSGGVFWRLMIGTMVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFMGEAGQVASEQAPESVQSAFVTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCGCTGTTGATGGTAGAATTCTATCTTATCTTGCGCGCG---------ATC---ACCAACGTCTCTGGT---GGCGTT------------------------------------TTCTGGCGC---TTGATGATCGGTACAATGGTCATGCTGGCCGCAGGTTACATGGGCGAG---------GCA------------------GGG------TAC---------------------------------ATC------------------------------------------------------------------AATGCA------------------ATGCTCGGC---TTTATCATTGGGATGGCTGGTTGGGCCTATATTCTATATGAAATC---------------TTC------ATG---GGTGAAGCGGGTCAAGTTGCGTCAGAG------CAG---GCACCTGAGTCTGTA---CAG---TCA---GCC---TTT---GTG---ACCATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--M-GEAGQVASE--Q-APESV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927076 [III-Alpha4-c] PRGD_OTU005a_84b04fece49e51bc40b6db36e80ad220 gb|KJ927076| PRGD_OTU005a_84b04fece49e51bc40b6db36e80ad220, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_84b04fece49e51bc40b6db36e80ad220, putative proteorhodopsin gene, partial cds. KJ927076 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACAGTGCCGCTGTTGATGGTAGAATTCTATCTTATCTTGCGCGCGATCACCAACGTCTCTGGTGGCGTTTTCTGGCGCTTGATGATCGGTACAATGGTCATGCTGGCCGCGGGTTACATGGGCGAGGCAGGGTACATCAATGCAATGCTCGGCTTTATCATTGGGATGGCTGGTTGGGCCTATATCCTATATGAAATCTTCATGGGTGAAGCGGGTCAAGTTGCGTCTGAACAGGCACCTGAATCTGTACAGTCAGCCTTTGTGACCATGCGTTGGATTGTGACCATT LITVPLLMVEFYLILRAITNVSGGVFWRLMIGTMVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFMGEAGQVASEQAPESVQSAFVTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCGCTGTTGATGGTAGAATTCTATCTTATCTTGCGCGCG---------ATC---ACCAACGTCTCTGGT---GGCGTT------------------------------------TTCTGGCGC---TTGATGATCGGTACAATGGTCATGCTGGCCGCGGGTTACATGGGCGAG---------GCA------------------GGG------TAC---------------------------------ATC------------------------------------------------------------------AATGCA------------------ATGCTCGGC---TTTATCATTGGGATGGCTGGTTGGGCCTATATCCTATATGAAATC---------------TTC------ATG---GGTGAAGCGGGTCAAGTTGCGTCTGAA------CAG---GCACCTGAATCTGTA---CAG---TCA---GCC---TTT---GTG---ACCATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--M-GEAGQVASE--Q-APESV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927100 [III-Alpha4-c] PRGD_OTU005a_fd0a689d59a6d358abc46a92c4ca03c2 gb|KJ927100| PRGD_OTU005a_fd0a689d59a6d358abc46a92c4ca03c2, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_fd0a689d59a6d358abc46a92c4ca03c2, putative proteorhodopsin gene, partial cds. KJ927100 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833) TTGATCACAGTGCCGCTGTTGATGGTAGAATTCTATCTTATCTTGCGCGCGATCACCAACGTCTCTGGTGGCGTTTTCTGGCGCTTGATGATCGGTACGATGGTCATGTTGGCCGCAGGTTACATGGGCGAGGCAGGGTACATCAATGCAATGCTCGGCTTTATCATTGGGATGGCTGGTTGGGCCTATATTCTATATGAAATCTTCATGGGTGAAGCGGGTCAAGTTGCGTCAGAGCAGGCGCCTGAGTCTGTACAGTCAGCCTTTGTGACCATGCGTTGGATTGTGACCATT LITVPLLMVEFYLILRAITNVSGGVFWRLMIGTMVMLAAGYMGEAGYINAMLGFIIGMAGWAYILYEIFMGEAGQVASEQAPESVQSAFVTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCGCTGTTGATGGTAGAATTCTATCTTATCTTGCGCGCG---------ATC---ACCAACGTCTCTGGT---GGCGTT------------------------------------TTCTGGCGC---TTGATGATCGGTACGATGGTCATGTTGGCCGCAGGTTACATGGGCGAG---------GCA------------------GGG------TAC---------------------------------ATC------------------------------------------------------------------AATGCA------------------ATGCTCGGC---TTTATCATTGGGATGGCTGGTTGGGCCTATATTCTATATGAAATC---------------TTC------ATG---GGTGAAGCGGGTCAAGTTGCGTCAGAG------CAG---GCGCCTGAGTCTGTA---CAG---TCA---GCC---TTT---GTG---ACCATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--M-GEAGQVASE--Q-APESV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ928609 [III-Alpha4-c] PRGD_OTU043_b03daaf1ccacc52260e469fd13b2866a gb|KJ928609| PRGD_OTU043_b03daaf1ccacc52260e469fd13b2866a, putative proteorhodopsin gene, partial cds. PRGD_OTU043_b03daaf1ccacc52260e469fd13b2866a, putative proteorhodopsin gene, partial cds. KJ928609 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), English Channel (48.7717, -3.9683) TTGATCACCGTTCCGTTGCAAATGGTGGAGTTCTACTTGGTTCTTGCTGCTATCACGGTAGTATCGGGCGGGATATTCTGGCGTTTGTTGATCGGATCATTTGTGATGTTGGTCGCAGGCTATTGTGGCGAAGCTGGCTACGTCAATCCTATGCTCGGTTTCATCATTGGGATGGCCGGTTGGGCATACATCCTGTATGAAATTTTCATGGGCGAAGCAAGTCAAGTTGCTTCGGAACAGGGCAGCGATGGAGTTCAATCAGCATATTCAACCATGCGTTGGATTGTGAGTATT LITVPLQMVEFYLVLAAITVVSGGIFWRLLIGSFVMLVAGYCGEAGYVNPMLGFIIGMAGWAYILYEIFMGEASQVASEQGSDGVQSAYSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTTCCGTTGCAAATGGTGGAGTTCTACTTGGTTCTTGCTGCT---------ATC---ACGGTAGTATCGGGC---GGGATA------------------------------------TTCTGGCGT---TTGTTGATCGGATCATTTGTGATGTTGGTCGCAGGCTATTGTGGCGAA---------GCT------------------GGC------TAC---------------------------------GTC------------------------------------------------------------------AATCCT------------------ATGCTCGGT---TTCATCATTGGGATGGCCGGTTGGGCATACATCCTGTATGAAATT---------------TTC------ATG---GGCGAAGCAAGTCAAGTTGCTTCGGAA------CAG---GGCAGCGATGGAGTT---CAA---TCA---GCA---TAT---TCA---ACCATG---CGTTGGATTGTGAGTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLVLAA---I-TVVSG-GI------------FWR-LLIGSFVMLVAGYCGE---A------G--Y-----------V----------------------NP------MLG-FIIGMAGWAYILYEI-----F--M-GEASQVASE--Q-GSDGV-Q-S-A-Y-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ928612 [III-Alpha4-c] PRGD_OTU043_c75fb01289673444f220e722d000990a gb|KJ928612| PRGD_OTU043_c75fb01289673444f220e722d000990a, putative proteorhodopsin gene, partial cds. PRGD_OTU043_c75fb01289673444f220e722d000990a, putative proteorhodopsin gene, partial cds. KJ928612 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) TTGATCACCGTTCCGTTGCAAATGGTGGAGTTCTACTTGGTTCTTGCTGCTATCACGGTAGTATCGGGCGGGATATTCTGGCGTTTGTTGATCGGATCATTTGTGATGTTGGTCGCAGGCTATTGTGGCGAAGCTGGCTACGTCAATCCTATGCTCGGTTTCATTATTGGGATGGCCGGTTGGGCATACATCCTGTATGAAATTTTCATGGGCGAAGCAAGTCAAGTTGCTTCGGAACAGGGTAGCGATGGAGTTCAATCAGCATATTCAACCATGCGTTGGATTGTGAGTATT LITVPLQMVEFYLVLAAITVVSGGIFWRLLIGSFVMLVAGYCGEAGYVNPMLGFIIGMAGWAYILYEIFMGEASQVASEQGSDGVQSAYSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTTCCGTTGCAAATGGTGGAGTTCTACTTGGTTCTTGCTGCT---------ATC---ACGGTAGTATCGGGC---GGGATA------------------------------------TTCTGGCGT---TTGTTGATCGGATCATTTGTGATGTTGGTCGCAGGCTATTGTGGCGAA---------GCT------------------GGC------TAC---------------------------------GTC------------------------------------------------------------------AATCCT------------------ATGCTCGGT---TTCATTATTGGGATGGCCGGTTGGGCATACATCCTGTATGAAATT---------------TTC------ATG---GGCGAAGCAAGTCAAGTTGCTTCGGAA------CAG---GGTAGCGATGGAGTT---CAA---TCA---GCA---TAT---TCA---ACCATG---CGTTGGATTGTGAGTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLVLAA---I-TVVSG-GI------------FWR-LLIGSFVMLVAGYCGE---A------G--Y-----------V----------------------NP------MLG-FIIGMAGWAYILYEI-----F--M-GEASQVASE--Q-GSDGV-Q-S-A-Y-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ928606 [III-Alpha4-c] PRGD_OTU043_9acc546e61517bb21167d75784484953 gb|KJ928606| PRGD_OTU043_9acc546e61517bb21167d75784484953, putative proteorhodopsin gene, partial cds. PRGD_OTU043_9acc546e61517bb21167d75784484953, putative proteorhodopsin gene, partial cds. KJ928606 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTGATCACCGTTCCGTTGCAAATGGTGGAGTTCTACTTGGTTCTTGCTGCTATCACGGTAGTATCGGGCGGGATATTCTGGCGTTTGTTGATCGGGTCATTTGTGATGTTGGTCGCAGGCTATTGTGGCGAAGCTGGCTACGTCAATCCTATGCTTGGTTTCATCGTTGGGATGGCCGGTTGGGCATACATTTTGTATGAAATTTTCATGGGCGAAGCAAGTCAAGTTGCTGCGGAACAGGGAAGCGATGGAGTTCAATCAGCATATTCAACAATGCGTTGGATTGTGAGTATT LITVPLQMVEFYLVLAAITVVSGGIFWRLLIGSFVMLVAGYCGEAGYVNPMLGFIVGMAGWAYILYEIFMGEASQVAAEQGSDGVQSAYSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTTCCGTTGCAAATGGTGGAGTTCTACTTGGTTCTTGCTGCT---------ATC---ACGGTAGTATCGGGC---GGGATA------------------------------------TTCTGGCGT---TTGTTGATCGGGTCATTTGTGATGTTGGTCGCAGGCTATTGTGGCGAA---------GCT------------------GGC------TAC---------------------------------GTC------------------------------------------------------------------AATCCT------------------ATGCTTGGT---TTCATCGTTGGGATGGCCGGTTGGGCATACATTTTGTATGAAATT---------------TTC------ATG---GGCGAAGCAAGTCAAGTTGCTGCGGAA------CAG---GGAAGCGATGGAGTT---CAA---TCA---GCA---TAT---TCA---ACAATG---CGTTGGATTGTGAGTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLVLAA---I-TVVSG-GI------------FWR-LLIGSFVMLVAGYCGE---A------G--Y-----------V----------------------NP------MLG-FIVGMAGWAYILYEI-----F--M-GEASQVAAE--Q-GSDGV-Q-S-A-Y-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ928602 [III-Alpha4-c] PRGD_OTU043_5b9a892efedb66392937f2bde14fe8ef gb|KJ928602| PRGD_OTU043_5b9a892efedb66392937f2bde14fe8ef, putative proteorhodopsin gene, partial cds. PRGD_OTU043_5b9a892efedb66392937f2bde14fe8ef, putative proteorhodopsin gene, partial cds. KJ928602 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), North Pacific Ocean (50.06, -139.53), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) TTGATCACCGTTCCATTGCAAATGGTTGAGTTCTACCTGGTCCTTGCTGCCATCACGGTAGTATCAGGCGGGATATTCTGGCGTTTGTTGATCGGGTCATTTGTGATGTTGGTCGCAGGCTATTGTGGCGAAGCTGGCTACGTCAATCCTATGCTCGGTTTCATCGTTGGGATGGCCGGTTGGGCATACATCCTTTATGAAATTTTCATGGGCGAAGCAAGTCAAGTCGCCGCGGAACAGGGAAGCGAAGGAGTTCAGTCAGCGTATTCAACGATGCGTTGGATTGTGAGTATT LITVPLQMVEFYLVLAAITVVSGGIFWRLLIGSFVMLVAGYCGEAGYVNPMLGFIVGMAGWAYILYEIFMGEASQVAAEQGSEGVQSAYSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTTCCATTGCAAATGGTTGAGTTCTACCTGGTCCTTGCTGCC---------ATC---ACGGTAGTATCAGGC---GGGATA------------------------------------TTCTGGCGT---TTGTTGATCGGGTCATTTGTGATGTTGGTCGCAGGCTATTGTGGCGAA---------GCT------------------GGC------TAC---------------------------------GTC------------------------------------------------------------------AATCCT------------------ATGCTCGGT---TTCATCGTTGGGATGGCCGGTTGGGCATACATCCTTTATGAAATT---------------TTC------ATG---GGCGAAGCAAGTCAAGTCGCCGCGGAA------CAG---GGAAGCGAAGGAGTT---CAG---TCA---GCG---TAT---TCA---ACGATG---CGTTGGATTGTGAGTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLVLAA---I-TVVSG-GI------------FWR-LLIGSFVMLVAGYCGE---A------G--Y-----------V----------------------NP------MLG-FIVGMAGWAYILYEI-----F--M-GEASQVAAE--Q-GSEGV-Q-S-A-Y-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ928601 [III-Alpha4-c] PRGD_OTU043_51f0459984834ea2284fd49213b7f133 gb|KJ928601| PRGD_OTU043_51f0459984834ea2284fd49213b7f133, putative proteorhodopsin gene, partial cds. PRGD_OTU043_51f0459984834ea2284fd49213b7f133, putative proteorhodopsin gene, partial cds. KJ928601 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Indian Ocean (-14.48, 113.45; -33.28, 45.35) TTGATCACCGTTCCATTGCAAATGGTTGAATTCTACCTGGTTCTTGCTGCCATCACGGTGGTATCAGGTGGGATATTCTGGCGTTTGTTGATCGGGTCAGTTGTGATGTTAGTCGCAGGCTATTGTGGCGAAGCTGGCTACGTCAATCCTATGCTCGGTTTCATCGTTGGGATGGCCGGTTGGGCATACATCCTTTATGAAATTTTCATGGGCGAAGCAAGTCAAGTCGCCGCGGAACAGGGAAGCGATGGAGTTCAATCCGCGTATTCAACGATGCGTTGGATCGTGAGTATT LITVPLQMVEFYLVLAAITVVSGGIFWRLLIGSVVMLVAGYCGEAGYVNPMLGFIVGMAGWAYILYEIFMGEASQVAAEQGSDGVQSAYSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTTCCATTGCAAATGGTTGAATTCTACCTGGTTCTTGCTGCC---------ATC---ACGGTGGTATCAGGT---GGGATA------------------------------------TTCTGGCGT---TTGTTGATCGGGTCAGTTGTGATGTTAGTCGCAGGCTATTGTGGCGAA---------GCT------------------GGC------TAC---------------------------------GTC------------------------------------------------------------------AATCCT------------------ATGCTCGGT---TTCATCGTTGGGATGGCCGGTTGGGCATACATCCTTTATGAAATT---------------TTC------ATG---GGCGAAGCAAGTCAAGTCGCCGCGGAA------CAG---GGAAGCGATGGAGTT---CAA---TCC---GCG---TAT---TCA---ACGATG---CGTTGGATCGTGAGTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLVLAA---I-TVVSG-GI------------FWR-LLIGSVVMLVAGYCGE---A------G--Y-----------V----------------------NP------MLG-FIVGMAGWAYILYEI-----F--M-GEASQVAAE--Q-GSDGV-Q-S-A-Y-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ928597 [III-Alpha4-c] PRGD_OTU043_2a342854d68455985f91170e68763ebe gb|KJ928597| PRGD_OTU043_2a342854d68455985f91170e68763ebe, putative proteorhodopsin gene, partial cds. PRGD_OTU043_2a342854d68455985f91170e68763ebe, putative proteorhodopsin gene, partial cds. KJ928597 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Indian Ocean (-23.5956, 69.0419) TTGATCACCGTTCCGTTGCAAATGGTTGAATTCTACCTAGTGCTTGCTGCTATCACGGTAGTATCAGGCGGGATATTCTGGCGTTTGTTGATCGGGTCAGTTGTGATGTTAGTCGCAGGCTATTGTGGCGAAGCTGGCTACGTCAACCCTATGCTCGGTTTCATCGTTGGGATGGCCGGTTGGGCATACATCCTTTATGAAATTTTCATGGGCGAAGCAAGTCAAGTCGCCGCGGAAAAGGGCAGCGATGGAGTTCAATCCGCATATTCAACGATGCGTTGGATTGTAAGTATT LITVPLQMVEFYLVLAAITVVSGGIFWRLLIGSVVMLVAGYCGEAGYVNPMLGFIVGMAGWAYILYEIFMGEASQVAAEKGSDGVQSAYSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTTCCGTTGCAAATGGTTGAATTCTACCTAGTGCTTGCTGCT---------ATC---ACGGTAGTATCAGGC---GGGATA------------------------------------TTCTGGCGT---TTGTTGATCGGGTCAGTTGTGATGTTAGTCGCAGGCTATTGTGGCGAA---------GCT------------------GGC------TAC---------------------------------GTC------------------------------------------------------------------AACCCT------------------ATGCTCGGT---TTCATCGTTGGGATGGCCGGTTGGGCATACATCCTTTATGAAATT---------------TTC------ATG---GGCGAAGCAAGTCAAGTCGCCGCGGAA------AAG---GGCAGCGATGGAGTT---CAA---TCC---GCA---TAT---TCA---ACGATG---CGTTGGATTGTAAGTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLVLAA---I-TVVSG-GI------------FWR-LLIGSVVMLVAGYCGE---A------G--Y-----------V----------------------NP------MLG-FIVGMAGWAYILYEI-----F--M-GEASQVAAE--K-GSDGV-Q-S-A-Y-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ928595 [III-Alpha4-c] PRGD_OTU043_055586eda4a4f28abbcea61928145163 gb|KJ928595| PRGD_OTU043_055586eda4a4f28abbcea61928145163, putative proteorhodopsin gene, partial cds. PRGD_OTU043_055586eda4a4f28abbcea61928145163, putative proteorhodopsin gene, partial cds. KJ928595 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175) TTGATCACCGTCCCGTTGCAAATGGTTGAATTCTATCTAGTGCTTGCTGCCATCACGGTAGTATCAGGCGGGATATTCTGGCGTTTGTTGATCGGGTCATTTGTGATGTTAATCGCAGGCTATTGTGGCGAAGCTGGCTACGTCAATCCTATGCTCGGTTTCATCGTTGGGATGGCTGGTTGGGCATACATCCTTTATGAAATTTTCATGGGCGAAGCAAGTCAAGTCGCCGCAGAACAGGGAAGCGATGGAGTTCAATCAGCGTATTCAACGATGCGTTGGATTGTGAGTATT LITVPLQMVEFYLVLAAITVVSGGIFWRLLIGSFVMLIAGYCGEAGYVNPMLGFIVGMAGWAYILYEIFMGEASQVAAEQGSDGVQSAYSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTCCCGTTGCAAATGGTTGAATTCTATCTAGTGCTTGCTGCC---------ATC---ACGGTAGTATCAGGC---GGGATA------------------------------------TTCTGGCGT---TTGTTGATCGGGTCATTTGTGATGTTAATCGCAGGCTATTGTGGCGAA---------GCT------------------GGC------TAC---------------------------------GTC------------------------------------------------------------------AATCCT------------------ATGCTCGGT---TTCATCGTTGGGATGGCTGGTTGGGCATACATCCTTTATGAAATT---------------TTC------ATG---GGCGAAGCAAGTCAAGTCGCCGCAGAA------CAG---GGAAGCGATGGAGTT---CAA---TCA---GCG---TAT---TCA---ACGATG---CGTTGGATTGTGAGTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLVLAA---I-TVVSG-GI------------FWR-LLIGSFVMLIAGYCGE---A------G--Y-----------V----------------------NP------MLG-FIVGMAGWAYILYEI-----F--M-GEASQVAAE--Q-GSDGV-Q-S-A-Y-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ928608 [III-Alpha4-c] PRGD_OTU043_a656affc9aaac74c8038014522c8a1a1 gb|KJ928608| PRGD_OTU043_a656affc9aaac74c8038014522c8a1a1, putative proteorhodopsin gene, partial cds. PRGD_OTU043_a656affc9aaac74c8038014522c8a1a1, putative proteorhodopsin gene, partial cds. KJ928608 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-33.28, 45.35) TTGATCACCGTTCCATTGCAAATGGTTGAATTCTACCTAGTGCTTGCTGCCATCACGGTAGTGTCAGGCGGGATATTCTGGCGTTTGTTGATCGGGTCCTTGGTGATGTTGATCGCAGGCTATTGTGGCGAAGCTGGCTACGTCAATCCTATGCTTGGTTTCATCGTTGGGATGGCCGGTTGGGCATACATCCTCTATGAAATTTTCATGGGCGAAGCAAGTCAAGTCGCCGCAGAACAGGGAAGCGATGGAGTTCAATCAGCGTATTCTACGATGCGTTGGATTGTGAGTATT LITVPLQMVEFYLVLAAITVVSGGIFWRLLIGSLVMLIAGYCGEAGYVNPMLGFIVGMAGWAYILYEIFMGEASQVAAEQGSDGVQSAYSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTTCCATTGCAAATGGTTGAATTCTACCTAGTGCTTGCTGCC---------ATC---ACGGTAGTGTCAGGC---GGGATA------------------------------------TTCTGGCGT---TTGTTGATCGGGTCCTTGGTGATGTTGATCGCAGGCTATTGTGGCGAA---------GCT------------------GGC------TAC---------------------------------GTC------------------------------------------------------------------AATCCT------------------ATGCTTGGT---TTCATCGTTGGGATGGCCGGTTGGGCATACATCCTCTATGAAATT---------------TTC------ATG---GGCGAAGCAAGTCAAGTCGCCGCAGAA------CAG---GGAAGCGATGGAGTT---CAA---TCA---GCG---TAT---TCT---ACGATG---CGTTGGATTGTGAGTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLVLAA---I-TVVSG-GI------------FWR-LLIGSLVMLIAGYCGE---A------G--Y-----------V----------------------NP------MLG-FIVGMAGWAYILYEI-----F--M-GEASQVAAE--Q-GSDGV-Q-S-A-Y-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ928596 [III-Alpha4-c] PRGD_OTU043_0a7a115347edcf24db4faac331be8771 gb|KJ928596| PRGD_OTU043_0a7a115347edcf24db4faac331be8771, putative proteorhodopsin gene, partial cds. PRGD_OTU043_0a7a115347edcf24db4faac331be8771, putative proteorhodopsin gene, partial cds. KJ928596 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTGATAACCGTTCCATTGCAAATGGTTGAATTCTACCTAGTGCTTGCTGCCATCACGGTAGTATCAGGCGGGATATTCTGGCGTTTGTTGATCGGGTCCTTGGTGATGTTGATCGCAGGCTATTGTGGCGAAGCTGGCTACGTCAATCCTATGCTTGGTTTCATCGTTGGGATGGCCGGTTGGGCATACATCCTTTATGAAATCTTCATGGGCGAAGCAAGTCAAGTCGCCGCAGAAAAGGGAAGCGATGGAGTCCAATCAGCCTATTCAACGATGCGTTGGATTGTGAGTATT LITVPLQMVEFYLVLAAITVVSGGIFWRLLIGSLVMLIAGYCGEAGYVNPMLGFIVGMAGWAYILYEIFMGEASQVAAEKGSDGVQSAYSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACCGTTCCATTGCAAATGGTTGAATTCTACCTAGTGCTTGCTGCC---------ATC---ACGGTAGTATCAGGC---GGGATA------------------------------------TTCTGGCGT---TTGTTGATCGGGTCCTTGGTGATGTTGATCGCAGGCTATTGTGGCGAA---------GCT------------------GGC------TAC---------------------------------GTC------------------------------------------------------------------AATCCT------------------ATGCTTGGT---TTCATCGTTGGGATGGCCGGTTGGGCATACATCCTTTATGAAATC---------------TTC------ATG---GGCGAAGCAAGTCAAGTCGCCGCAGAA------AAG---GGAAGCGATGGAGTC---CAA---TCA---GCC---TAT---TCA---ACGATG---CGTTGGATTGTGAGTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLVLAA---I-TVVSG-GI------------FWR-LLIGSLVMLIAGYCGE---A------G--Y-----------V----------------------NP------MLG-FIVGMAGWAYILYEI-----F--M-GEASQVAAE--K-GSDGV-Q-S-A-Y-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ928604 [III-Alpha4-c] PRGD_OTU043_64ff0f92657d77fb82eecec8c71e988c gb|KJ928604| PRGD_OTU043_64ff0f92657d77fb82eecec8c71e988c, putative proteorhodopsin gene, partial cds. PRGD_OTU043_64ff0f92657d77fb82eecec8c71e988c, putative proteorhodopsin gene, partial cds. KJ928604 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACCGTTCCATTGCAAATGGTTGAATTCTACCTAGTGCTTGCTGCCATCACGGTAGTATCAGGCGGGATATTCTGGCGTTTGTTGATCGGGTCCTTGGTGATGTTGATCGCAGGCTATTGTGGCGAAGCTGGCTACGTCAATCCTATGCTTGGTTTCATCGTTGGGATAGCCGGTTGGGCATACATCCTTTATGAAGTCTTCATGGGCGAAGCAAGTCAAGTCGCCGCAGAAAAGGGAAGCGATGGAGTTCAATCAGCGTATTCAACGATGCGTTGGATTGTGAGTATT LITVPLQMVEFYLVLAAITVVSGGIFWRLLIGSLVMLIAGYCGEAGYVNPMLGFIVGIAGWAYILYEVFMGEASQVAAEKGSDGVQSAYSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTTCCATTGCAAATGGTTGAATTCTACCTAGTGCTTGCTGCC---------ATC---ACGGTAGTATCAGGC---GGGATA------------------------------------TTCTGGCGT---TTGTTGATCGGGTCCTTGGTGATGTTGATCGCAGGCTATTGTGGCGAA---------GCT------------------GGC------TAC---------------------------------GTC------------------------------------------------------------------AATCCT------------------ATGCTTGGT---TTCATCGTTGGGATAGCCGGTTGGGCATACATCCTTTATGAAGTC---------------TTC------ATG---GGCGAAGCAAGTCAAGTCGCCGCAGAA------AAG---GGAAGCGATGGAGTT---CAA---TCA---GCG---TAT---TCA---ACGATG---CGTTGGATTGTGAGTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLVLAA---I-TVVSG-GI------------FWR-LLIGSLVMLIAGYCGE---A------G--Y-----------V----------------------NP------MLG-FIVGIAGWAYILYEV-----F--M-GEASQVAAE--K-GSDGV-Q-S-A-Y-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ928607 [III-Alpha4-c] PRGD_OTU043_a0167e5c3142e880c67859565e5fbd95 gb|KJ928607| PRGD_OTU043_a0167e5c3142e880c67859565e5fbd95, putative proteorhodopsin gene, partial cds. PRGD_OTU043_a0167e5c3142e880c67859565e5fbd95, putative proteorhodopsin gene, partial cds. KJ928607 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), Arctic Ocean-Atlantic side (73.9992, 19.2097), Arctic Ocean-Pacific side (69.5142, -133.4185), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Indian Ocean (-33.28, 45.35) TTGATCACCGTTCCATTGCAAATGGTTGAATTCTACCTAGTGCTTGCTGCCATCACGGTAGTATCAGGCGGGATATTCTGGCGTTTGTTGATCGGGTCCTTGGTGATGTTGATCGCAGGCTATTGTGGCGAAGCTGGCTACGTCAATCCTATGCTTGGTTTCATCGTTGGGATGGCCGGTTGGGCATACATCCTTTATGAAATCTTCATGGGCGAAGCAAGTCAAGTCGCCGCAGAACAGGGAAGCGATGGAGTTCAATCAGCGTATTCAACGATGCGTTGGATTGTGAGTATT LITVPLQMVEFYLVLAAITVVSGGIFWRLLIGSLVMLIAGYCGEAGYVNPMLGFIVGMAGWAYILYEIFMGEASQVAAEQGSDGVQSAYSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTTCCATTGCAAATGGTTGAATTCTACCTAGTGCTTGCTGCC---------ATC---ACGGTAGTATCAGGC---GGGATA------------------------------------TTCTGGCGT---TTGTTGATCGGGTCCTTGGTGATGTTGATCGCAGGCTATTGTGGCGAA---------GCT------------------GGC------TAC---------------------------------GTC------------------------------------------------------------------AATCCT------------------ATGCTTGGT---TTCATCGTTGGGATGGCCGGTTGGGCATACATCCTTTATGAAATC---------------TTC------ATG---GGCGAAGCAAGTCAAGTCGCCGCAGAA------CAG---GGAAGCGATGGAGTT---CAA---TCA---GCG---TAT---TCA---ACGATG---CGTTGGATTGTGAGTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLVLAA---I-TVVSG-GI------------FWR-LLIGSLVMLIAGYCGE---A------G--Y-----------V----------------------NP------MLG-FIVGMAGWAYILYEI-----F--M-GEASQVAAE--Q-GSDGV-Q-S-A-Y-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ928613 [III-Alpha4-c] PRGD_OTU043_d9957a8db1ef953792fb0fb66360f831 gb|KJ928613| PRGD_OTU043_d9957a8db1ef953792fb0fb66360f831, putative proteorhodopsin gene, partial cds. PRGD_OTU043_d9957a8db1ef953792fb0fb66360f831, putative proteorhodopsin gene, partial cds. KJ928613 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (72.0542, -130.8781), Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-33.28, 45.35) TTGATCACTGTTCCATTGCAAATGGTTGAATTCTACCTAGTGCTTGCTGCCATCACGGTAGTATCAGGCGGGATATTCTGGCGTTTGTTGATCGGGTCATTTGTGATGTTGATTGCAGGCTATTGTGGCGAAGCTGGATACGTCAATCCTATGCTGGGCTTTATCATCGGGATGGCCGGTTGGGCCTATATTCTGTATGAAATCTTCATGGGTGAAGCAAGTCAAGTCGCCGCAGAACAGGGAAGCGATGGAGTCCAATCAGCGTATTCAACGATGCGTTGGATTGTGAGTATT LITVPLQMVEFYLVLAAITVVSGGIFWRLLIGSFVMLIAGYCGEAGYVNPMLGFIIGMAGWAYILYEIFMGEASQVAAEQGSDGVQSAYSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTTCCATTGCAAATGGTTGAATTCTACCTAGTGCTTGCTGCC---------ATC---ACGGTAGTATCAGGC---GGGATA------------------------------------TTCTGGCGT---TTGTTGATCGGGTCATTTGTGATGTTGATTGCAGGCTATTGTGGCGAA---------GCT------------------GGA------TAC---------------------------------GTC------------------------------------------------------------------AATCCT------------------ATGCTGGGC---TTTATCATCGGGATGGCCGGTTGGGCCTATATTCTGTATGAAATC---------------TTC------ATG---GGTGAAGCAAGTCAAGTCGCCGCAGAA------CAG---GGAAGCGATGGAGTC---CAA---TCA---GCG---TAT---TCA---ACGATG---CGTTGGATTGTGAGTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLVLAA---I-TVVSG-GI------------FWR-LLIGSFVMLIAGYCGE---A------G--Y-----------V----------------------NP------MLG-FIIGMAGWAYILYEI-----F--M-GEASQVAAE--Q-GSDGV-Q-S-A-Y-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ928594 [III-Alpha4-c] PRGD_OTU043_otuREP_310274a22cae794c63ed0e845a8a2bc8 gb|KJ928594| PRGD_OTU043_otuREP_310274a22cae794c63ed0e845a8a2bc8, putative proteorhodopsin gene, partial cds. PRGD_OTU043_otuREP_310274a22cae794c63ed0e845a8a2bc8, putative proteorhodopsin gene, partial cds. KJ928594 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) TTGATCACTGTTCCATTGCAAATGGTTGAATTCTACCTAGTGCTTGCTGCCATCACGGTAGTATCAGGCGGGATATTCTGGCGTTTGTTGATCGGGTCATTTGTGATGTTGATCGCAGGCTATTGTGGCGAAGCTGGATACGTCAATCCTATGCTTGGCTTTATCATCGGGATGGCCGGTTGGGCCTATATTCTGTATGAAATCTTCATGGGTGAAGCAAGTCAAGTCGCCGCAGAACAGGGAAGCGATGGAGTCCAATCAGCGTATTCAACGATGCGTTGGATTGTGAGTATT LITVPLQMVEFYLVLAAITVVSGGIFWRLLIGSFVMLIAGYCGEAGYVNPMLGFIIGMAGWAYILYEIFMGEASQVAAEQGSDGVQSAYSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTTCCATTGCAAATGGTTGAATTCTACCTAGTGCTTGCTGCC---------ATC---ACGGTAGTATCAGGC---GGGATA------------------------------------TTCTGGCGT---TTGTTGATCGGGTCATTTGTGATGTTGATCGCAGGCTATTGTGGCGAA---------GCT------------------GGA------TAC---------------------------------GTC------------------------------------------------------------------AATCCT------------------ATGCTTGGC---TTTATCATCGGGATGGCCGGTTGGGCCTATATTCTGTATGAAATC---------------TTC------ATG---GGTGAAGCAAGTCAAGTCGCCGCAGAA------CAG---GGAAGCGATGGAGTC---CAA---TCA---GCG---TAT---TCA---ACGATG---CGTTGGATTGTGAGTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLVLAA---I-TVVSG-GI------------FWR-LLIGSFVMLIAGYCGE---A------G--Y-----------V----------------------NP------MLG-FIIGMAGWAYILYEI-----F--M-GEASQVAAE--Q-GSDGV-Q-S-A-Y-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ928598 [III-Alpha4-c] PRGD_OTU043_453c5dcc9772fca1f0feb4fe743ed596 gb|KJ928598| PRGD_OTU043_453c5dcc9772fca1f0feb4fe743ed596, putative proteorhodopsin gene, partial cds. PRGD_OTU043_453c5dcc9772fca1f0feb4fe743ed596, putative proteorhodopsin gene, partial cds. KJ928598 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTGATCACCGTTCCATTGCAAATGGTTGAATTCTACCTAGTGCTAGCTGCCATCACGGTAGTATCAGGCGGGATATTCTGGCGTTTGTTGATCGGGTCATTTGTGATGTTAATCGCAGGCTATTGTGGCGAAGCTGGCTACGTCAATCCTATGCTTGGCTTTATCATCGGGATGGCCGGTTGGGCGTATATTCTGTATGAAATCTTCATGGGTGAAGCAAGTCAAGTCGCCGCAGAACAGGGAAGCGATGGAGTCCAATCAGCGTATTCAACGATGCGTTGGATTGTGAGTATT LITVPLQMVEFYLVLAAITVVSGGIFWRLLIGSFVMLIAGYCGEAGYVNPMLGFIIGMAGWAYILYEIFMGEASQVAAEQGSDGVQSAYSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTTCCATTGCAAATGGTTGAATTCTACCTAGTGCTAGCTGCC---------ATC---ACGGTAGTATCAGGC---GGGATA------------------------------------TTCTGGCGT---TTGTTGATCGGGTCATTTGTGATGTTAATCGCAGGCTATTGTGGCGAA---------GCT------------------GGC------TAC---------------------------------GTC------------------------------------------------------------------AATCCT------------------ATGCTTGGC---TTTATCATCGGGATGGCCGGTTGGGCGTATATTCTGTATGAAATC---------------TTC------ATG---GGTGAAGCAAGTCAAGTCGCCGCAGAA------CAG---GGAAGCGATGGAGTC---CAA---TCA---GCG---TAT---TCA---ACGATG---CGTTGGATTGTGAGTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLVLAA---I-TVVSG-GI------------FWR-LLIGSFVMLIAGYCGE---A------G--Y-----------V----------------------NP------MLG-FIIGMAGWAYILYEI-----F--M-GEASQVAAE--Q-GSDGV-Q-S-A-Y-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ928615 [III-Alpha4-c] PRGD_OTU043_ed0abbb103a32cb3f30828a9b02c1dcf gb|KJ928615| PRGD_OTU043_ed0abbb103a32cb3f30828a9b02c1dcf, putative proteorhodopsin gene, partial cds. PRGD_OTU043_ed0abbb103a32cb3f30828a9b02c1dcf, putative proteorhodopsin gene, partial cds. KJ928615 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175) TTGATCACCGTTCCATTGCAAATGGTTGAATTCTACCTAGTGCTTGCTGCCATCACGGTAGTATCAGGCGGGATATTCTGGCGTTTGTTGATCGGGTCATTTGTGATGTTGATCGCAGGCTATTGTGGCGAAGCTGGCTACGTCAATCCTATGCTTGGCTTTATCATCGGGATGGCCGGTTGGGCGTATATTCTGTATGAAATCTTCATGGGCGAAGCAAGTCAAGTCGCCGCAGAACAGGGAAGCGATGGAGTTCAATCAGCGTATTCAACGATGCGTTGGATTGTGAGTATT LITVPLQMVEFYLVLAAITVVSGGIFWRLLIGSFVMLIAGYCGEAGYVNPMLGFIIGMAGWAYILYEIFMGEASQVAAEQGSDGVQSAYSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTTCCATTGCAAATGGTTGAATTCTACCTAGTGCTTGCTGCC---------ATC---ACGGTAGTATCAGGC---GGGATA------------------------------------TTCTGGCGT---TTGTTGATCGGGTCATTTGTGATGTTGATCGCAGGCTATTGTGGCGAA---------GCT------------------GGC------TAC---------------------------------GTC------------------------------------------------------------------AATCCT------------------ATGCTTGGC---TTTATCATCGGGATGGCCGGTTGGGCGTATATTCTGTATGAAATC---------------TTC------ATG---GGCGAAGCAAGTCAAGTCGCCGCAGAA------CAG---GGAAGCGATGGAGTT---CAA---TCA---GCG---TAT---TCA---ACGATG---CGTTGGATTGTGAGTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLVLAA---I-TVVSG-GI------------FWR-LLIGSFVMLIAGYCGE---A------G--Y-----------V----------------------NP------MLG-FIIGMAGWAYILYEI-----F--M-GEASQVAAE--Q-GSDGV-Q-S-A-Y-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ928600 [III-Alpha4-c] PRGD_OTU043_49938b6b80d1e920515ccbf1376b5bda gb|KJ928600| PRGD_OTU043_49938b6b80d1e920515ccbf1376b5bda, putative proteorhodopsin gene, partial cds. PRGD_OTU043_49938b6b80d1e920515ccbf1376b5bda, putative proteorhodopsin gene, partial cds. KJ928600 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097) TTGATCACCGTTCCATTGCAAATGGTTGAATTCTACCTAGTGCTTGCTGCCATCACGGTAGTATCAGGCGGGATATTCTGGCGTTTGTTGATCGGTTCATTTGTGATGTTGATCGCAGGCTATTGTGGCGAAGCTGGCTACGTTAATCCTATGCTTGGCTTTATCATCGGGATGGCCGGTTGGGCGTATATTCTGTATGAAATCTTCATGGGCGAAGCAAGTCAAGTCGCCGCAGAACAGGGAAGCGATGGAGTTCAATCAGCGTATTCAACGATGCGTTGGATTGTGAGTATT LITVPLQMVEFYLVLAAITVVSGGIFWRLLIGSFVMLIAGYCGEAGYVNPMLGFIIGMAGWAYILYEIFMGEASQVAAEQGSDGVQSAYSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTTCCATTGCAAATGGTTGAATTCTACCTAGTGCTTGCTGCC---------ATC---ACGGTAGTATCAGGC---GGGATA------------------------------------TTCTGGCGT---TTGTTGATCGGTTCATTTGTGATGTTGATCGCAGGCTATTGTGGCGAA---------GCT------------------GGC------TAC---------------------------------GTT------------------------------------------------------------------AATCCT------------------ATGCTTGGC---TTTATCATCGGGATGGCCGGTTGGGCGTATATTCTGTATGAAATC---------------TTC------ATG---GGCGAAGCAAGTCAAGTCGCCGCAGAA------CAG---GGAAGCGATGGAGTT---CAA---TCA---GCG---TAT---TCA---ACGATG---CGTTGGATTGTGAGTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLVLAA---I-TVVSG-GI------------FWR-LLIGSFVMLIAGYCGE---A------G--Y-----------V----------------------NP------MLG-FIIGMAGWAYILYEI-----F--M-GEASQVAAE--Q-GSDGV-Q-S-A-Y-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ928603 [III-Alpha4-c] PRGD_OTU043_60c4a69cdf64f30b9d042240c5f3d19c gb|KJ928603| PRGD_OTU043_60c4a69cdf64f30b9d042240c5f3d19c, putative proteorhodopsin gene, partial cds. PRGD_OTU043_60c4a69cdf64f30b9d042240c5f3d19c, putative proteorhodopsin gene, partial cds. KJ928603 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175) TTGATCACCGTTCCATTGCAAATGGTTGAGTTCTACCTAGTGCTTGCTGCCATCACGGTAGTATCAGGCGGGATATTCTGGCGTTTGTTGATCGGGTCATTTGTGATGTTGATCGCAGGCTATTGTGGCGAAGCTGGCTACGTCAATCCTATGCTTGGCTTTATCATCGGGATGGCCGGTTGGGCCTATATTCTGTATGAAATCTTCATGGGCGAAGCAAGTCAAGTCGCCGCAGAACAGGGAAGCGATGGAGTTCAATCAGCGTATTCAACGATGCGTTGGATTGTGAGTATT LITVPLQMVEFYLVLAAITVVSGGIFWRLLIGSFVMLIAGYCGEAGYVNPMLGFIIGMAGWAYILYEIFMGEASQVAAEQGSDGVQSAYSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTTCCATTGCAAATGGTTGAGTTCTACCTAGTGCTTGCTGCC---------ATC---ACGGTAGTATCAGGC---GGGATA------------------------------------TTCTGGCGT---TTGTTGATCGGGTCATTTGTGATGTTGATCGCAGGCTATTGTGGCGAA---------GCT------------------GGC------TAC---------------------------------GTC------------------------------------------------------------------AATCCT------------------ATGCTTGGC---TTTATCATCGGGATGGCCGGTTGGGCCTATATTCTGTATGAAATC---------------TTC------ATG---GGCGAAGCAAGTCAAGTCGCCGCAGAA------CAG---GGAAGCGATGGAGTT---CAA---TCA---GCG---TAT---TCA---ACGATG---CGTTGGATTGTGAGTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLVLAA---I-TVVSG-GI------------FWR-LLIGSFVMLIAGYCGE---A------G--Y-----------V----------------------NP------MLG-FIIGMAGWAYILYEI-----F--M-GEASQVAAE--Q-GSDGV-Q-S-A-Y-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ928611 [III-Alpha4-c] PRGD_OTU043_c1ad9e928e8d5665f07670a475590ddc gb|KJ928611| PRGD_OTU043_c1ad9e928e8d5665f07670a475590ddc, putative proteorhodopsin gene, partial cds. PRGD_OTU043_c1ad9e928e8d5665f07670a475590ddc, putative proteorhodopsin gene, partial cds. KJ928611 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) TTGATCACCGTTCCATTGCAAATGGTTGAATTCTACCTAGTGCTTGCTGCCATCACGGTAGTATCAGGCGGGATATTCTGGCGTTTGTTAATCGGGTCCTTGGTGATGTTAATCGCAGGCTATTGTGGCGAAGCTGGCTACGTCAATCCTATGCTTGGCTTTATCATCGGGATGGCCGGTTGGGCCTATATTCTGTACGAAATCTTCATGGGCGAAGCAAGTCAAGTCGCCGCAGAACAGGGAAGCGATGGAGTTCAATCAGCGTATTCAACGATGCGTTGGATTGTGAGTATT LITVPLQMVEFYLVLAAITVVSGGIFWRLLIGSLVMLIAGYCGEAGYVNPMLGFIIGMAGWAYILYEIFMGEASQVAAEQGSDGVQSAYSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTTCCATTGCAAATGGTTGAATTCTACCTAGTGCTTGCTGCC---------ATC---ACGGTAGTATCAGGC---GGGATA------------------------------------TTCTGGCGT---TTGTTAATCGGGTCCTTGGTGATGTTAATCGCAGGCTATTGTGGCGAA---------GCT------------------GGC------TAC---------------------------------GTC------------------------------------------------------------------AATCCT------------------ATGCTTGGC---TTTATCATCGGGATGGCCGGTTGGGCCTATATTCTGTACGAAATC---------------TTC------ATG---GGCGAAGCAAGTCAAGTCGCCGCAGAA------CAG---GGAAGCGATGGAGTT---CAA---TCA---GCG---TAT---TCA---ACGATG---CGTTGGATTGTGAGTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLVLAA---I-TVVSG-GI------------FWR-LLIGSLVMLIAGYCGE---A------G--Y-----------V----------------------NP------MLG-FIIGMAGWAYILYEI-----F--M-GEASQVAAE--Q-GSDGV-Q-S-A-Y-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ928599 [III-Alpha4-c] PRGD_OTU043_473cc5c540d3ed41d951d041df4e1778 gb|KJ928599| PRGD_OTU043_473cc5c540d3ed41d951d041df4e1778, putative proteorhodopsin gene, partial cds. PRGD_OTU043_473cc5c540d3ed41d951d041df4e1778, putative proteorhodopsin gene, partial cds. KJ928599 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Indian Ocean (-33.28, 45.35) TTGATCACCGTTCCGTTGCAAATGGTTGAATTCTACCTAGTGCTTGCTGCCATCACGGCAGTATCAGGCGGGATATTCTGGCGTTTGTTGATCGGGTCCTTGGTGATGTTGATCGCAGGCTATTGTGGCGAAGCTGGCTACGTCAATCCTATGCTTGGCTTTATCGTCGGGATGGCCGGTTGGGCCTATATTCTTTATGAAATCTTCATGGGCGAAGCAAGTCAAGTCGCCGCAGAACAGGGAAGCGATGGAGTTCAATCAGCGTATTCAACGATGCGTTGGATTGTGAGTATT LITVPLQMVEFYLVLAAITAVSGGIFWRLLIGSLVMLIAGYCGEAGYVNPMLGFIVGMAGWAYILYEIFMGEASQVAAEQGSDGVQSAYSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTTCCGTTGCAAATGGTTGAATTCTACCTAGTGCTTGCTGCC---------ATC---ACGGCAGTATCAGGC---GGGATA------------------------------------TTCTGGCGT---TTGTTGATCGGGTCCTTGGTGATGTTGATCGCAGGCTATTGTGGCGAA---------GCT------------------GGC------TAC---------------------------------GTC------------------------------------------------------------------AATCCT------------------ATGCTTGGC---TTTATCGTCGGGATGGCCGGTTGGGCCTATATTCTTTATGAAATC---------------TTC------ATG---GGCGAAGCAAGTCAAGTCGCCGCAGAA------CAG---GGAAGCGATGGAGTT---CAA---TCA---GCG---TAT---TCA---ACGATG---CGTTGGATTGTGAGTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLVLAA---I-TAVSG-GI------------FWR-LLIGSLVMLIAGYCGE---A------G--Y-----------V----------------------NP------MLG-FIVGMAGWAYILYEI-----F--M-GEASQVAAE--Q-GSDGV-Q-S-A-Y-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ928605 [III-Alpha4-c] PRGD_OTU043_85dcfdbd7bbc5d63b14e5ab7c2c850e6 gb|KJ928605| PRGD_OTU043_85dcfdbd7bbc5d63b14e5ab7c2c850e6, putative proteorhodopsin gene, partial cds. PRGD_OTU043_85dcfdbd7bbc5d63b14e5ab7c2c850e6, putative proteorhodopsin gene, partial cds. KJ928605 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683) TTGATTACCGTCCCATTGCAAATGGTTGAATTCTACCTAGTGCTTGCTGCCATCACGGCAGTATCAGGTGGGATATTCTGGCGTTTATTGATCGGGTCCTTGGTGATGTTGATCGCAGGCTATTGTGGCGAAGCTGGCTACGTCAATCCTATGCTTGGCTTTATCGTCGGGATGGCCGGTTGGGCCTATATTCTGTATGAAATCTTCATGGGCGAAGCAAGTCAAGTCGCCGCAGAACAGGGAAGCGATGGAGTTCAATCAGCGTATTCAACGATGCGTTGGATTGTGAGTATT LITVPLQMVEFYLVLAAITAVSGGIFWRLLIGSLVMLIAGYCGEAGYVNPMLGFIVGMAGWAYILYEIFMGEASQVAAEQGSDGVQSAYSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACCGTCCCATTGCAAATGGTTGAATTCTACCTAGTGCTTGCTGCC---------ATC---ACGGCAGTATCAGGT---GGGATA------------------------------------TTCTGGCGT---TTATTGATCGGGTCCTTGGTGATGTTGATCGCAGGCTATTGTGGCGAA---------GCT------------------GGC------TAC---------------------------------GTC------------------------------------------------------------------AATCCT------------------ATGCTTGGC---TTTATCGTCGGGATGGCCGGTTGGGCCTATATTCTGTATGAAATC---------------TTC------ATG---GGCGAAGCAAGTCAAGTCGCCGCAGAA------CAG---GGAAGCGATGGAGTT---CAA---TCA---GCG---TAT---TCA---ACGATG---CGTTGGATTGTGAGTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLVLAA---I-TAVSG-GI------------FWR-LLIGSLVMLIAGYCGE---A------G--Y-----------V----------------------NP------MLG-FIVGMAGWAYILYEI-----F--M-GEASQVAAE--Q-GSDGV-Q-S-A-Y-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ928610 [III-Alpha4-c] PRGD_OTU043_b371374c7295bddb7a7fc15f9eca2efc gb|KJ928610| PRGD_OTU043_b371374c7295bddb7a7fc15f9eca2efc, putative proteorhodopsin gene, partial cds. PRGD_OTU043_b371374c7295bddb7a7fc15f9eca2efc, putative proteorhodopsin gene, partial cds. KJ928610 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTAATTACCGTTCCATTACAAATGGTCGAATTTTACCTGGTTCTTGCTGCTATCACGGCGGTATCGGGTGGAATATTCTGGCGTCTTCTAATTGGTTCGGTGGTTATGCTGGCAGCAGGATATTGCGGAGAAGCTGGATACGTCAATGCAATGCTCGGTTTCATTATCGGGATGGCTGGTTGGGCCTATATTCTTTATGAGATTTTCTTTGGCGAAGCAAGTCAGGTTGCTGCAGAACAAGGAAGTGAAGGCGTTCAATCTGCTTACTCAACGATGCGTTGGATTGTGAGTATT LITVPLQMVEFYLVLAAITAVSGGIFWRLLIGSVVMLAAGYCGEAGYVNAMLGFIIGMAGWAYILYEIFFGEASQVAAEQGSEGVQSAYSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACCGTTCCATTACAAATGGTCGAATTTTACCTGGTTCTTGCTGCT---------ATC---ACGGCGGTATCGGGT---GGAATA------------------------------------TTCTGGCGT---CTTCTAATTGGTTCGGTGGTTATGCTGGCAGCAGGATATTGCGGAGAA---------GCT------------------GGA------TAC---------------------------------GTC------------------------------------------------------------------AATGCA------------------ATGCTCGGT---TTCATTATCGGGATGGCTGGTTGGGCCTATATTCTTTATGAGATT---------------TTC------TTT---GGCGAAGCAAGTCAGGTTGCTGCAGAA------CAA---GGAAGTGAAGGCGTT---CAA---TCT---GCT---TAC---TCA---ACGATG---CGTTGGATTGTGAGTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLVLAA---I-TAVSG-GI------------FWR-LLIGSVVMLAAGYCGE---A------G--Y-----------V----------------------NA------MLG-FIIGMAGWAYILYEI-----F--F-GEASQVAAE--Q-GSEGV-Q-S-A-Y-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ928614 [III-Alpha4-c] PRGD_OTU043_dc8162c985cdb9bf4a255d14db0382d2 gb|KJ928614| PRGD_OTU043_dc8162c985cdb9bf4a255d14db0382d2, putative proteorhodopsin gene, partial cds. PRGD_OTU043_dc8162c985cdb9bf4a255d14db0382d2, putative proteorhodopsin gene, partial cds. KJ928614 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAATTACCGTACCGTTACAAATGGTTGAGTTCTACTTGGTCCTTGCTGCTATTACTGTTGTATCCGGGGGCATCTTCTGGCGCCTAATGATCGGTTCGGTCGTTATGTTGGCAGCGGGTTATCTGGGTGAAGCTGGAATGATCAATGCACAACTAGGGTTCGTCGTTGGGATGGCCGGTTGGGCATACATTCTCTATGAGATCTTCATGGGCGAAGCTAGTCAAGTTGCTTCAGAGCAGGGAAGCGAAGGCGTTCAATCAGCATATTCAACAATGCGTTGGATTGTGAGCATC LITVPLQMVEFYLVLAAITVVSGGIFWRLMIGSVVMLAAGYLGEAGMINAQLGFVVGMAGWAYILYEIFMGEASQVASEQGSEGVQSAYSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACCGTACCGTTACAAATGGTTGAGTTCTACTTGGTCCTTGCTGCT---------ATT---ACTGTTGTATCCGGG---GGCATC------------------------------------TTCTGGCGC---CTAATGATCGGTTCGGTCGTTATGTTGGCAGCGGGTTATCTGGGTGAA---------GCT------------------GGA------ATG---------------------------------ATC------------------------------------------------------------------AATGCA------------------CAACTAGGG---TTCGTCGTTGGGATGGCCGGTTGGGCATACATTCTCTATGAGATC---------------TTC------ATG---GGCGAAGCTAGTCAAGTTGCTTCAGAG------CAG---GGAAGCGAAGGCGTT---CAA---TCA---GCA---TAT---TCA---ACAATG---CGTTGGATTGTGAGCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLVLAA---I-TVVSG-GI------------FWR-LMIGSVVMLAAGYLGE---A------G--M-----------I----------------------NA------QLG-FVVGMAGWAYILYEI-----F--M-GEASQVASE--Q-GSEGV-Q-S-A-Y-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927074 [III-Alpha4-c] PRGD_OTU005a_7db075f5ffafc5ce4bec0b365d43283d gb|KJ927074| PRGD_OTU005a_7db075f5ffafc5ce4bec0b365d43283d, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_7db075f5ffafc5ce4bec0b365d43283d, putative proteorhodopsin gene, partial cds. KJ927074 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637; -33.9602, -73.3769), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTGATTACTGTGCCGCTATTGATGGTAGAGTTTTACTTGATCCTTCGTGCGATCACAAAAGTTTCGGGCGGTGTGTTCTGGCGCCTAATGATTGGTACTTTTGTTATGCTTGCAGCTGGTTACATGGGTGAAGCTGGTTACATTAATGCGTGGCTTGGGTTCATCGTTGGTATGGCTGGTTGGGCATACATTTTGTATGAAATCTTCTTTGGTGAAGCTGGCAAAGTTGCTGCAAATGAAGCTTCAGAGTCAGTTAAATCAGCGTTTTCATCAATGCGCTGGATTGTTACAATC LITVPLLMVEFYLILRAITKVSGGVFWRLMIGTFVMLAAGYMGEAGYINAWLGFIVGMAGWAYILYEIFFGEAGKVAANEASESVKSAFSSMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTGCCGCTATTGATGGTAGAGTTTTACTTGATCCTTCGTGCG---------ATC---ACAAAAGTTTCGGGC---GGTGTG------------------------------------TTCTGGCGC---CTAATGATTGGTACTTTTGTTATGCTTGCAGCTGGTTACATGGGTGAA---------GCT------------------GGT------TAC---------------------------------ATT------------------------------------------------------------------AATGCG------------------TGGCTTGGG---TTCATCGTTGGTATGGCTGGTTGGGCATACATTTTGTATGAAATC---------------TTC------TTT---GGTGAAGCTGGCAAAGTTGCTGCAAAT------GAA---GCTTCAGAGTCAGTT---AAA---TCA---GCG---TTT---TCA---TCAATG---CGCTGGATTGTTACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TKVSG-GV------------FWR-LMIGTFVMLAAGYMGE---A------G--Y-----------I----------------------NA------WLG-FIVGMAGWAYILYEI-----F--F-GEAGKVAAN--E-ASESV-K-S-A-F-S-SM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927080 [III-Alpha4-c] PRGD_OTU005a_ab85f89ce3cbe85f84a80cf3a6e28ccc gb|KJ927080| PRGD_OTU005a_ab85f89ce3cbe85f84a80cf3a6e28ccc, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_ab85f89ce3cbe85f84a80cf3a6e28ccc, putative proteorhodopsin gene, partial cds. KJ927080 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12) CTGATCACAGTTCCTCTCCTTATGGTCGAATTCTATCTCATCCTTCGTGCGATCACAGCCGTTTCTGGTGGTGTTTTCTGGAGACTGATGATTGGTACGTTTGTCATGTTGGCCGCCGGTTATATGGGTGAAGCTGGTTACATCAGCGCAGCCATCGGTTTCTTCATCGGTATAGTCGGATGGGCATATATCCTTTATGAAATCTTCTTTGGTGAAGCAGGCAAAGTAGCGTCTGAAAAAGCGCCAGCCTCTGTTCAATCAGCGTTTTCAACGATGCGTTGGATTGTTACAATT LITVPLLMVEFYLILRAITAVSGGVFWRLMIGTFVMLAAGYMGEAGYISAAIGFFIGIVGWAYILYEIFFGEAGKVASEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTTCCTCTCCTTATGGTCGAATTCTATCTCATCCTTCGTGCG---------ATC---ACAGCCGTTTCTGGT---GGTGTT------------------------------------TTCTGGAGA---CTGATGATTGGTACGTTTGTCATGTTGGCCGCCGGTTATATGGGTGAA---------GCT------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AGCGCA------------------GCCATCGGT---TTCTTCATCGGTATAGTCGGATGGGCATATATCCTTTATGAAATC---------------TTC------TTT---GGTGAAGCAGGCAAAGTAGCGTCTGAA------AAA---GCGCCAGCCTCTGTT---CAA---TCA---GCG---TTT---TCA---ACGATG---CGTTGGATTGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTFVMLAAGYMGE---A------G--Y-----------I----------------------SA------AIG-FFIGIVGWAYILYEI-----F--F-GEAGKVASE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927101 [III-Alpha4-c] PRGD_OTU005a_fe4bba510831cf78ac791dc00936b107 gb|KJ927101| PRGD_OTU005a_fe4bba510831cf78ac791dc00936b107, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_fe4bba510831cf78ac791dc00936b107, putative proteorhodopsin gene, partial cds. KJ927101 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175) CTGATCACAGTTCCTCTCCTTATGGTCGAATTCTATCTCATCCTTCGTGCGATCACAGCCGTTTCTGGTGGTGTTTTCTGGAGACTGATGATTGGTACGTTTGTCATGTTGGCCGCCGGTTACATGGGTGAAGCTGGTTACATCAGCGCAGCCATCGGTTTCTTCATCGGTATAGTCGGATGGGCATATATCCTTTATGAAATCTTCTTTGGTGAAGCAGGCAAAGTAGCGTCTGAAAAAGCGCCGGCCTCTGTTCAGTCAGCGTTTTCAACAATGCGTTGGATTGTTACAATT LITVPLLMVEFYLILRAITAVSGGVFWRLMIGTFVMLAAGYMGEAGYISAAIGFFIGIVGWAYILYEIFFGEAGKVASEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTTCCTCTCCTTATGGTCGAATTCTATCTCATCCTTCGTGCG---------ATC---ACAGCCGTTTCTGGT---GGTGTT------------------------------------TTCTGGAGA---CTGATGATTGGTACGTTTGTCATGTTGGCCGCCGGTTACATGGGTGAA---------GCT------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AGCGCA------------------GCCATCGGT---TTCTTCATCGGTATAGTCGGATGGGCATATATCCTTTATGAAATC---------------TTC------TTT---GGTGAAGCAGGCAAAGTAGCGTCTGAA------AAA---GCGCCGGCCTCTGTT---CAG---TCA---GCG---TTT---TCA---ACAATG---CGTTGGATTGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTFVMLAAGYMGE---A------G--Y-----------I----------------------SA------AIG-FFIGIVGWAYILYEI-----F--F-GEAGKVASE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-c]_KJ927069 [III-Alpha4-c] PRGD_OTU005a_4ed269b204f3039e89ba0a532367f2ab gb|KJ927069| PRGD_OTU005a_4ed269b204f3039e89ba0a532367f2ab, putative proteorhodopsin gene, partial cds. PRGD_OTU005a_4ed269b204f3039e89ba0a532367f2ab, putative proteorhodopsin gene, partial cds. KJ927069 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/C subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; ; 67.49, -168.12) CTGATCACAGTTCCTCTCCTAATGGTCGAGTTCTATCTCATCCTTCGTGCGATCACAGCCGTTTCTGGTGGTGTTTTCTGGAGACTGATGATTGGTACGTTTGTCATGCTGGCCGCCGGTTATTTGGGTGAAGCTGGTACCATACCCGCATCCGTCGGTTTCGTCATCGGTATGCTCGGATGGGCATATATCCTTTATGAAATCTTCTTTGGTGAAGCAGGCAAAGTAGCGTCTGAAAAAGCGCCAGCCTCTGTTCAATCAGCGTTTTCAACGATGCGTTGGATTGTTACAATT LITVPLLMVEFYLILRAITAVSGGVFWRLMIGTFVMLAAGYLGEAGTIPASVGFVIGMLGWAYILYEIFFGEAGKVASEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTTCCTCTCCTAATGGTCGAGTTCTATCTCATCCTTCGTGCG---------ATC---ACAGCCGTTTCTGGT---GGTGTT------------------------------------TTCTGGAGA---CTGATGATTGGTACGTTTGTCATGCTGGCCGCCGGTTATTTGGGTGAA---------GCT------------------GGT------ACC---------------------------------ATA------------------------------------------------------------------CCCGCA------------------TCCGTCGGT---TTCGTCATCGGTATGCTCGGATGGGCATATATCCTTTATGAAATC---------------TTC------TTT---GGTGAAGCAGGCAAAGTAGCGTCTGAA------AAA---GCGCCAGCCTCTGTT---CAA---TCA---GCG---TTT---TCA---ACGATG---CGTTGGATTGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTFVMLAAGYLGE---A------G--T-----------I----------------------PA------SVG-FVIGMLGWAYILYEI-----F--F-GEAGKVASE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_KJ927104 [III-Alpha4-ARCTIC42C05] PRGD_OTU005b_08766dd2ccd0454a99386fb299d7ae53 gb|KJ927104| PRGD_OTU005b_08766dd2ccd0454a99386fb299d7ae53, putative proteorhodopsin gene, partial cds. PRGD_OTU005b_08766dd2ccd0454a99386fb299d7ae53, putative proteorhodopsin gene, partial cds. KJ927104 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781) CTCATCACAGTGCCACTTTTGATGGTTGAATTCTACCTCATCCTTCGTGCGATCACTGCTGTTTCAGGTGGCGTATTTTGGCGCCTTATGATTGGCACCTTGGTGATGTTGGCAGCAGGTTACATGGGCGAAGCTGGCTACATCAGCGCTTGGCTCGGGTTTATTGTTGGTATCGTAGGTTGGGCATACATTTTGTATGAAATCTTCTTTGGCGAAGCAGGCAAGGTTGCAGCAGAGAAAGCCCCAGCATCTGTTCAATCTGCATTCTCAACAATGCGTTGGATTGTTACAATT LITVPLLMVEFYLILRAITAVSGGVFWRLMIGTLVMLAAGYMGEAGYISAWLGFIVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTGCCACTTTTGATGGTTGAATTCTACCTCATCCTTCGTGCG---------ATC---ACTGCTGTTTCAGGT---GGCGTA------------------------------------TTTTGGCGC---CTTATGATTGGCACCTTGGTGATGTTGGCAGCAGGTTACATGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGCGCT------------------TGGCTCGGG---TTTATTGTTGGTATCGTAGGTTGGGCATACATTTTGTATGAAATC---------------TTC------TTT---GGCGAAGCAGGCAAGGTTGCAGCAGAG------AAA---GCCCCAGCATCTGTT---CAA---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTLVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_KJ927138 [III-Alpha4-ARCTIC42C05] PRGD_OTU005b_e66c23672211129987f2ac49aa916004 gb|KJ927138| PRGD_OTU005b_e66c23672211129987f2ac49aa916004, putative proteorhodopsin gene, partial cds. PRGD_OTU005b_e66c23672211129987f2ac49aa916004, putative proteorhodopsin gene, partial cds. KJ927138 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683) CTCATCACAGTGCCACTTTTGATGGTTGAATTCTACCTCATCCTTCGTGCGATCACTGCTGTTTCAGGTGGCGTATTTTGGCGCCTTATGATTGGCACCTTGGTAATGTTGGCAGCAGGTTACATGGGCGAAGCTGGCTACATCAGCGCTTGGCTCGGGTTCATTGTTGGTATCGTAGGTTGGGCATACATTTTGTATGAAATCTTCTTTGGCGAAGCAGGCAAGGTTGCAGCAGAGAAAGCCCCAGCATCTGTTCAATCTGCATTCTCAACAATGCGTTGGATTGTTACAATT LITVPLLMVEFYLILRAITAVSGGVFWRLMIGTLVMLAAGYMGEAGYISAWLGFIVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTGCCACTTTTGATGGTTGAATTCTACCTCATCCTTCGTGCG---------ATC---ACTGCTGTTTCAGGT---GGCGTA------------------------------------TTTTGGCGC---CTTATGATTGGCACCTTGGTAATGTTGGCAGCAGGTTACATGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGCGCT------------------TGGCTCGGG---TTCATTGTTGGTATCGTAGGTTGGGCATACATTTTGTATGAAATC---------------TTC------TTT---GGCGAAGCAGGCAAGGTTGCAGCAGAG------AAA---GCCCCAGCATCTGTT---CAA---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTLVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_KJ927119 [III-Alpha4-ARCTIC42C05] PRGD_OTU005b_657a84035f8d33eefc22808b241a6ea3 gb|KJ927119| PRGD_OTU005b_657a84035f8d33eefc22808b241a6ea3, putative proteorhodopsin gene, partial cds. PRGD_OTU005b_657a84035f8d33eefc22808b241a6ea3, putative proteorhodopsin gene, partial cds. KJ927119 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Bering strait marine 67.49 -168.12 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (67.49, -168.12) CTCATCACAGTACCACTTTTGATGGTTGAATTCTACCTCATCCTTCGTGCGATCACTGCTGTTTCAGGTGGCGTATTTTGGCGCCTTATGATTGGCACCTTGGTGATGTTGGCAGCAGGTTACATGGGCGAAGCTGGCTACATCAGCGCTTGGCTCGGGTTCATTGTTGGTATCGTAGGTTGGGCATACATTTTGTATGAAATCTTCTTTGGCGAAGCAGGCAAGGTTGCAGCAGAGAAAGCTCCAGCATCTGTTCAATCTGCATTCTCAACAATGCGTTGGATTGTTACAATT LITVPLLMVEFYLILRAITAVSGGVFWRLMIGTLVMLAAGYMGEAGYISAWLGFIVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTACCACTTTTGATGGTTGAATTCTACCTCATCCTTCGTGCG---------ATC---ACTGCTGTTTCAGGT---GGCGTA------------------------------------TTTTGGCGC---CTTATGATTGGCACCTTGGTGATGTTGGCAGCAGGTTACATGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGCGCT------------------TGGCTCGGG---TTCATTGTTGGTATCGTAGGTTGGGCATACATTTTGTATGAAATC---------------TTC------TTT---GGCGAAGCAGGCAAGGTTGCAGCAGAG------AAA---GCTCCAGCATCTGTT---CAA---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTLVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_KJ927112 [III-Alpha4-ARCTIC42C05] PRGD_OTU005b_287044802380bbdbc9917fa6de39fd4c gb|KJ927112| PRGD_OTU005b_287044802380bbdbc9917fa6de39fd4c, putative proteorhodopsin gene, partial cds. PRGD_OTU005b_287044802380bbdbc9917fa6de39fd4c, putative proteorhodopsin gene, partial cds. KJ927112 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683) CTCATCACAGTGCCACTTTTGATGGTTGAATTCTACCTCATCCTTCGTGCGATCACTGCTGTTTCAGGTGGCGTATTTTGGCGCCTTATGATTGGCACCTTGGTAATGTTGGCAGCAGGTTACATGGGCGAAGCTGGCTATATCAGCGCTTGGCTCGGGTTCATTGTTGGTATCGTAGGTTGGGCATACATTTTGTATGAAATCTTCTTTGGTGAAGCAGGCAAGGTTGCAGCAGAGAAAGCTCCAGCATCTGTTCAATCTGCATTCTCAACAATGCGTTGGATTGTTACAATT LITVPLLMVEFYLILRAITAVSGGVFWRLMIGTLVMLAAGYMGEAGYISAWLGFIVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTGCCACTTTTGATGGTTGAATTCTACCTCATCCTTCGTGCG---------ATC---ACTGCTGTTTCAGGT---GGCGTA------------------------------------TTTTGGCGC---CTTATGATTGGCACCTTGGTAATGTTGGCAGCAGGTTACATGGGCGAA---------GCT------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AGCGCT------------------TGGCTCGGG---TTCATTGTTGGTATCGTAGGTTGGGCATACATTTTGTATGAAATC---------------TTC------TTT---GGTGAAGCAGGCAAGGTTGCAGCAGAG------AAA---GCTCCAGCATCTGTT---CAA---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTLVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_KJ927134 [III-Alpha4-ARCTIC42C05] PRGD_OTU005b_b57216bc5a6dfa9558d20d08478a2e7c gb|KJ927134| PRGD_OTU005b_b57216bc5a6dfa9558d20d08478a2e7c, putative proteorhodopsin gene, partial cds. PRGD_OTU005b_b57216bc5a6dfa9558d20d08478a2e7c, putative proteorhodopsin gene, partial cds. KJ927134 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833) CTCATCACAGTGCCACTTTTGATGGTTGAATTCTACCTCATCCTTCGTGCGATCACTGCTGTGTCAGGTGGCGTATTTTGGCGCCTTATGATTGGCACCTTGGTAATGTTGGCAGCAGGTTACATGGGCGAAGCTGGCTACATCAGCGCTTGGCTCGGGTTCATTGTTGGTATCGTAGGTTGGGCATACATATTGTATGAAATCTTCTTTGGCGAAGCAGGCAAGGTTGCAGCAGAGAAGGCTCCAGCATCTGTTCAATCTGCATTCTCAACAATGCGTTGGATAGTTACAATT LITVPLLMVEFYLILRAITAVSGGVFWRLMIGTLVMLAAGYMGEAGYISAWLGFIVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTGCCACTTTTGATGGTTGAATTCTACCTCATCCTTCGTGCG---------ATC---ACTGCTGTGTCAGGT---GGCGTA------------------------------------TTTTGGCGC---CTTATGATTGGCACCTTGGTAATGTTGGCAGCAGGTTACATGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGCGCT------------------TGGCTCGGG---TTCATTGTTGGTATCGTAGGTTGGGCATACATATTGTATGAAATC---------------TTC------TTT---GGCGAAGCAGGCAAGGTTGCAGCAGAG------AAG---GCTCCAGCATCTGTT---CAA---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATAGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTLVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_KJ927121 [III-Alpha4-ARCTIC42C05] PRGD_OTU005b_77ac11336b655df731c035eb5fe6e845 gb|KJ927121| PRGD_OTU005b_77ac11336b655df731c035eb5fe6e845, putative proteorhodopsin gene, partial cds. PRGD_OTU005b_77ac11336b655df731c035eb5fe6e845, putative proteorhodopsin gene, partial cds. KJ927121 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637; -33.9602, -73.3769), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73) CTCATCACAGTGCCACTTTTGATGGTTGAATTCTACCTCATCCTTCGTGCGATCACTGCTGTGTCAGGTGGCGTATTTTGGCGCCTTATGATTGGCACCCTGGTAATGTTAGCAGCAGGTTACATGGGCGAAGCTGGCTACATCAGCGCTTGGCTCGGGTTCATTGTTGGTATCGTAGGTTGGGCATACATTTTGTATGAAATCTTCTTTGGCGAAGCAGGCAAAGTTGCAGCAGAAAAAGCTCCGGCATCTGTTCAATCTGCATTCTCAACAATGCGTTGGATTGTTACAATT LITVPLLMVEFYLILRAITAVSGGVFWRLMIGTLVMLAAGYMGEAGYISAWLGFIVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTGCCACTTTTGATGGTTGAATTCTACCTCATCCTTCGTGCG---------ATC---ACTGCTGTGTCAGGT---GGCGTA------------------------------------TTTTGGCGC---CTTATGATTGGCACCCTGGTAATGTTAGCAGCAGGTTACATGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGCGCT------------------TGGCTCGGG---TTCATTGTTGGTATCGTAGGTTGGGCATACATTTTGTATGAAATC---------------TTC------TTT---GGCGAAGCAGGCAAAGTTGCAGCAGAA------AAA---GCTCCGGCATCTGTT---CAA---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTLVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_KJ927120 [III-Alpha4-ARCTIC42C05] PRGD_OTU005b_6a4d48e8256d4becf41c4a988b454750 gb|KJ927120| PRGD_OTU005b_6a4d48e8256d4becf41c4a988b454750, putative proteorhodopsin gene, partial cds. PRGD_OTU005b_6a4d48e8256d4becf41c4a988b454750, putative proteorhodopsin gene, partial cds. KJ927120 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), Indian Ocean (-33.28, 45.35) CTCATCACAGTGCCACTTTTGATGGTTGAATTCTACCTCATCCTTCGTGCGATCACTGCTGTGTCAGGTGGCGTATTTTGGCGCCTTATGATTGGCACCCTGGTAATGTTGGCAGCGGGTTACATGGGCGAAGCTGGCTACATCAGCGCTTGGCTCGGATTCATTGTTGGTATCGTAGGTTGGGCATACATTCTGTATGAAATCTTCTTTGGCGAAGCAGGCAAGGTTGCAGCAGAAAAAGCTCCAGCATCTGTTCAATCTGCATTCTCAACAATGCGTTGGATTGTTACAATT LITVPLLMVEFYLILRAITAVSGGVFWRLMIGTLVMLAAGYMGEAGYISAWLGFIVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTGCCACTTTTGATGGTTGAATTCTACCTCATCCTTCGTGCG---------ATC---ACTGCTGTGTCAGGT---GGCGTA------------------------------------TTTTGGCGC---CTTATGATTGGCACCCTGGTAATGTTGGCAGCGGGTTACATGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGCGCT------------------TGGCTCGGA---TTCATTGTTGGTATCGTAGGTTGGGCATACATTCTGTATGAAATC---------------TTC------TTT---GGCGAAGCAGGCAAGGTTGCAGCAGAA------AAA---GCTCCAGCATCTGTT---CAA---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTLVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_KJ927136 [III-Alpha4-ARCTIC42C05] PRGD_OTU005b_c9de6f1781b3d59eac6142ec63d4ef0d gb|KJ927136| PRGD_OTU005b_c9de6f1781b3d59eac6142ec63d4ef0d, putative proteorhodopsin gene, partial cds. PRGD_OTU005b_c9de6f1781b3d59eac6142ec63d4ef0d, putative proteorhodopsin gene, partial cds. KJ927136 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTCATCACAGTGCCACTTTTGATGGTTGAATTCTACCTCATCCTTCGTGCGATCACTGCTGTGTCAGGTGGCGTATTTTGGCGCCTTATGATTGGCACCCTGGTAATGTTGGCAGCAGGTTACATGGGCGAAGCTGGCTACATCAGCGCTTGGCTCGGGTTCATTGTTGGTATCGTAGGTTGGGCATACATTTTGTATGAAATCTTCTTTGGCGAAGCAGGCAAGGTTGCAGCAGAAAAAGCTCCAGCATCTGTTCAATCTGCATTCTCAACAATGCGTTGGATTGTTACAATT LITVPLLMVEFYLILRAITAVSGGVFWRLMIGTLVMLAAGYMGEAGYISAWLGFIVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTGCCACTTTTGATGGTTGAATTCTACCTCATCCTTCGTGCG---------ATC---ACTGCTGTGTCAGGT---GGCGTA------------------------------------TTTTGGCGC---CTTATGATTGGCACCCTGGTAATGTTGGCAGCAGGTTACATGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGCGCT------------------TGGCTCGGG---TTCATTGTTGGTATCGTAGGTTGGGCATACATTTTGTATGAAATC---------------TTC------TTT---GGCGAAGCAGGCAAGGTTGCAGCAGAA------AAA---GCTCCAGCATCTGTT---CAA---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTLVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_KJ927124 [III-Alpha4-ARCTIC42C05] PRGD_OTU005b_7b2937b600f0281bfb44e042f028477f gb|KJ927124| PRGD_OTU005b_7b2937b600f0281bfb44e042f028477f, putative proteorhodopsin gene, partial cds. PRGD_OTU005b_7b2937b600f0281bfb44e042f028477f, putative proteorhodopsin gene, partial cds. KJ927124 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683) CTCATCACAGTGCCACTTTTAATGGTTGAATTCTACCTCATCCTTCGTGCGATCACTGCTGTGTCAGGTGGCGTATTTTGGCGCCTTATGATTGGCACCCTGGTAATGTTGGCAGCAGGTTACATGGGCGAAGCTGGTTACATCAGCGCTTGGCTCGGGTTCATTGTTGGTATCGTAGGTTGGGCATACATTTTGTATGAAATCTTCTTTGGCGAAGCAGGCAAGGTTGCAGCAGAAAAAGCTCCAGCATCTGTTCAATCTGCATTCTCAACGATGCGTTGGATTGTTACAATT LITVPLLMVEFYLILRAITAVSGGVFWRLMIGTLVMLAAGYMGEAGYISAWLGFIVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTGCCACTTTTAATGGTTGAATTCTACCTCATCCTTCGTGCG---------ATC---ACTGCTGTGTCAGGT---GGCGTA------------------------------------TTTTGGCGC---CTTATGATTGGCACCCTGGTAATGTTGGCAGCAGGTTACATGGGCGAA---------GCT------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AGCGCT------------------TGGCTCGGG---TTCATTGTTGGTATCGTAGGTTGGGCATACATTTTGTATGAAATC---------------TTC------TTT---GGCGAAGCAGGCAAGGTTGCAGCAGAA------AAA---GCTCCAGCATCTGTT---CAA---TCT---GCA---TTC---TCA---ACGATG---CGTTGGATTGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTLVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_KJ927133 [III-Alpha4-ARCTIC42C05] PRGD_OTU005b_b524cc3d7c93deab9cbac7981e31a2f9 gb|KJ927133| PRGD_OTU005b_b524cc3d7c93deab9cbac7981e31a2f9, putative proteorhodopsin gene, partial cds. PRGD_OTU005b_b524cc3d7c93deab9cbac7981e31a2f9, putative proteorhodopsin gene, partial cds. KJ927133 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) CTCATCACAGTGCCACTTTTGATGGTTGAATTCTACCTCATCCTTCGTGCGATCACTGCTGTGTCAGGTGGCGTATTTTGGCGCCTTATGATTGGCACCCTGGTAATGTTGGCAGCAGGTTACATGGGCGAAGCTGGCTACATCAGCGCTTGGCTCGGGTTCATTGTTGGTATCGTAGGTTGGGCATACATTTTGTATGAAATCTTCTTTGGTGAAGCAGGCAAGGTTGCAGCAGAGAAAGCTCCAGCATCAGTTCAATCTGCATTCTCAACAATGCGTTGGATTGTTACAATT LITVPLLMVEFYLILRAITAVSGGVFWRLMIGTLVMLAAGYMGEAGYISAWLGFIVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTGCCACTTTTGATGGTTGAATTCTACCTCATCCTTCGTGCG---------ATC---ACTGCTGTGTCAGGT---GGCGTA------------------------------------TTTTGGCGC---CTTATGATTGGCACCCTGGTAATGTTGGCAGCAGGTTACATGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGCGCT------------------TGGCTCGGG---TTCATTGTTGGTATCGTAGGTTGGGCATACATTTTGTATGAAATC---------------TTC------TTT---GGTGAAGCAGGCAAGGTTGCAGCAGAG------AAA---GCTCCAGCATCAGTT---CAA---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTLVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_KJ927135 [III-Alpha4-ARCTIC42C05] PRGD_OTU005b_be0870032aecb6366c535cb8851a45b5 gb|KJ927135| PRGD_OTU005b_be0870032aecb6366c535cb8851a45b5, putative proteorhodopsin gene, partial cds. PRGD_OTU005b_be0870032aecb6366c535cb8851a45b5, putative proteorhodopsin gene, partial cds. KJ927135 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781) CTCATCACAGTGCCACTTTTGATGGTTGAATTCTACCTCATCCTTCGTGCGATCACTGCTGTGTCAGGTGGCGTATTTTGGCGCCTTATGATTGGCACCCTGGTAATGTTGGCAGCAGGTTACATGGGCGAAGCTGGCTACATCAGCGCTTGGCTCGGGTTCATTGTTGGTATCGTAGGTTGGGCATACATTTTGTATGAAATCTTCTTTGGTGAAGCCGGTAAGGTTGCTGCAGAGAAAGCTCCAGCATCAGTTCAATCTGCATTCTCAACGATGCGTTGGATTGTTACAATC LITVPLLMVEFYLILRAITAVSGGVFWRLMIGTLVMLAAGYMGEAGYISAWLGFIVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTGCCACTTTTGATGGTTGAATTCTACCTCATCCTTCGTGCG---------ATC---ACTGCTGTGTCAGGT---GGCGTA------------------------------------TTTTGGCGC---CTTATGATTGGCACCCTGGTAATGTTGGCAGCAGGTTACATGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGCGCT------------------TGGCTCGGG---TTCATTGTTGGTATCGTAGGTTGGGCATACATTTTGTATGAAATC---------------TTC------TTT---GGTGAAGCCGGTAAGGTTGCTGCAGAG------AAA---GCTCCAGCATCAGTT---CAA---TCT---GCA---TTC---TCA---ACGATG---CGTTGGATTGTTACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTLVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_KJ927117 [III-Alpha4-ARCTIC42C05] PRGD_OTU005b_580b6294a9263c3fbc381557d0acf03f gb|KJ927117| PRGD_OTU005b_580b6294a9263c3fbc381557d0acf03f, putative proteorhodopsin gene, partial cds. PRGD_OTU005b_580b6294a9263c3fbc381557d0acf03f, putative proteorhodopsin gene, partial cds. KJ927117 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (33.935, 18.508), Indian Ocean (-14.48, 113.45) CTCATCACAGTGCCGCTTTTGATGGTTGAATTTTACCTCATCCTTCGTGCAATCACTGCTGTTTCAGGTGGTGTATTTTGGCGCCTTATGATCGGCACCATGGTAATGTTGGCGGCAGGTTACATGGGCGAAGCTGGCTACATCAGTGCTTGGCTTGGCTTCATAGTTGGCATAGTGGGTTGGGCATACATTTTGTATGAAATCTTCTTTGGCGAAGCAGGCAAGGTTGCCGCAGAGAAAGCTCCAGCATCGGTACAATCTGCATTCTCAACAATGCGTTGGATCGTTACAATT LITVPLLMVEFYLILRAITAVSGGVFWRLMIGTMVMLAAGYMGEAGYISAWLGFIVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTGCCGCTTTTGATGGTTGAATTTTACCTCATCCTTCGTGCA---------ATC---ACTGCTGTTTCAGGT---GGTGTA------------------------------------TTTTGGCGC---CTTATGATCGGCACCATGGTAATGTTGGCGGCAGGTTACATGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGTGCT------------------TGGCTTGGC---TTCATAGTTGGCATAGTGGGTTGGGCATACATTTTGTATGAAATC---------------TTC------TTT---GGCGAAGCAGGCAAGGTTGCCGCAGAG------AAA---GCTCCAGCATCGGTA---CAA---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATCGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_KJ927137 [III-Alpha4-ARCTIC42C05] PRGD_OTU005b_e2b8dc8ee1b3572733acb74e671f4795 gb|KJ927137| PRGD_OTU005b_e2b8dc8ee1b3572733acb74e671f4795, putative proteorhodopsin gene, partial cds. PRGD_OTU005b_e2b8dc8ee1b3572733acb74e671f4795, putative proteorhodopsin gene, partial cds. KJ927137 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTCATCACAGTGCCGCTTTTGATGGTTGAATTTTACCTCATCCTTCGTGCAATCACTGCTGTTTCAGGTGGTGTATTTTGGCGCCTTATGATCGGCACCATGGTAATGTTGGCGGCAGGTTACATGGGCGAAGCTGGCTACATCAGTGCTTGGCTTGGCTTCATAGTTGGCATAGTGGGTTGGGCATACATTTTGTATGAAATCTTCTTTGGCGAAGCAGGTAAGGTTGCCGCAGAGAAAGCTCCAGCATCGGTACAATCTGCATTCTCAACAATGCGTTGGATTGTTACAATT LITVPLLMVEFYLILRAITAVSGGVFWRLMIGTMVMLAAGYMGEAGYISAWLGFIVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTGCCGCTTTTGATGGTTGAATTTTACCTCATCCTTCGTGCA---------ATC---ACTGCTGTTTCAGGT---GGTGTA------------------------------------TTTTGGCGC---CTTATGATCGGCACCATGGTAATGTTGGCGGCAGGTTACATGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGTGCT------------------TGGCTTGGC---TTCATAGTTGGCATAGTGGGTTGGGCATACATTTTGTATGAAATC---------------TTC------TTT---GGCGAAGCAGGTAAGGTTGCCGCAGAG------AAA---GCTCCAGCATCGGTA---CAA---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_KJ927115 [III-Alpha4-ARCTIC42C05] PRGD_OTU005b_3b31f8222dc05f932b3bf331f3d906bc gb|KJ927115| PRGD_OTU005b_3b31f8222dc05f932b3bf331f3d906bc, putative proteorhodopsin gene, partial cds. PRGD_OTU005b_3b31f8222dc05f932b3bf331f3d906bc, putative proteorhodopsin gene, partial cds. KJ927115 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781) CTCATCACAGTGCCGCTTTTGATGGTTGAATTTTACCTCATCCTTCGTGCAATCACTGCTGTTTCAGGTGGTGTATTTTGGCGCCTTATGATCGGCACCATGGTAATGTTGGCGGCAGGTTACATGGGCGAAGCTGGCTACATCAGTGCTTGGCTTGGCTTCATAGTTGGCATAGTGGGTTGGGCATACATTTTGTATGAAATCTTCTTTGGCGAAGCAGGTAAGGTTGCCGCAGAGAAAGCTCCAGCATCAGTTCAATCTGCATTCTCAACGATGCGTTGGATTGTTACAATC LITVPLLMVEFYLILRAITAVSGGVFWRLMIGTMVMLAAGYMGEAGYISAWLGFIVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTGCCGCTTTTGATGGTTGAATTTTACCTCATCCTTCGTGCA---------ATC---ACTGCTGTTTCAGGT---GGTGTA------------------------------------TTTTGGCGC---CTTATGATCGGCACCATGGTAATGTTGGCGGCAGGTTACATGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGTGCT------------------TGGCTTGGC---TTCATAGTTGGCATAGTGGGTTGGGCATACATTTTGTATGAAATC---------------TTC------TTT---GGCGAAGCAGGTAAGGTTGCCGCAGAG------AAA---GCTCCAGCATCAGTT---CAA---TCT---GCA---TTC---TCA---ACGATG---CGTTGGATTGTTACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_KJ927127 [III-Alpha4-ARCTIC42C05] PRGD_OTU005b_8c8e3ab82cd6e88c73de380e174925a7 gb|KJ927127| PRGD_OTU005b_8c8e3ab82cd6e88c73de380e174925a7, putative proteorhodopsin gene, partial cds. PRGD_OTU005b_8c8e3ab82cd6e88c73de380e174925a7, putative proteorhodopsin gene, partial cds. KJ927127 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781) CTCATCACAGTGCCGCTTTTGATGGTTGAATTTTACCTCATCCTTCGTGCAATCACTGCTGTTTCAGGTGGTGTATTTTGGCGCCTTATGATCGGCACCATGGTAATGTTGGCGGCAGGTTACATGGGCGAAGCTGGCTACATCAGTGCTTGGCTTGGCTTCATAGTTGGCATAGTGGGTTGGGCATACATTTTGTATGAAATCTTCTTTGGTGAAGCCGGTAAGGTTGCTGCAGAGAAAGCTCCAGCATCAGTTCAATCTGCATTCTCAACGATGCGTTGGATTGTTACAATC LITVPLLMVEFYLILRAITAVSGGVFWRLMIGTMVMLAAGYMGEAGYISAWLGFIVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTGCCGCTTTTGATGGTTGAATTTTACCTCATCCTTCGTGCA---------ATC---ACTGCTGTTTCAGGT---GGTGTA------------------------------------TTTTGGCGC---CTTATGATCGGCACCATGGTAATGTTGGCGGCAGGTTACATGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGTGCT------------------TGGCTTGGC---TTCATAGTTGGCATAGTGGGTTGGGCATACATTTTGTATGAAATC---------------TTC------TTT---GGTGAAGCCGGTAAGGTTGCTGCAGAG------AAA---GCTCCAGCATCAGTT---CAA---TCT---GCA---TTC---TCA---ACGATG---CGTTGGATTGTTACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_KJ927109 [III-Alpha4-ARCTIC42C05] PRGD_OTU005b_1d03706b1e18c897bf7f70c4bef17571 gb|KJ927109| PRGD_OTU005b_1d03706b1e18c897bf7f70c4bef17571, putative proteorhodopsin gene, partial cds. PRGD_OTU005b_1d03706b1e18c897bf7f70c4bef17571, putative proteorhodopsin gene, partial cds. KJ927109 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Bering strait marine 67.49 -168.12 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; ; 67.49, -168.12) CTCATCACAGTGCCGCTTCTAATGGTTGAATTCTACCTCATCCTTCGTGCGATTACAGCGGTTTCAGGTGGTGTGTTTTGGCGCCTTATGATCGGTAGCATAGTTATGCTGGCGGCTGGTTACTTGGGCGAAGCTGGCTACATCAGCGCTTGGCTTGGGTTCATCGTCGGCATAGTGGGTTGGGCATACATCTTGTATGAAATCTTCTTTGGAGAAGCGGGCAAAGTTGCTGCTGAAAAAGCTCCAGCGTCAGTGCAATCTGCATTTTCAACAATGCGTTGGATTGTTACAATT LITVPLLMVEFYLILRAITAVSGGVFWRLMIGSIVMLAAGYLGEAGYISAWLGFIVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTGCCGCTTCTAATGGTTGAATTCTACCTCATCCTTCGTGCG---------ATT---ACAGCGGTTTCAGGT---GGTGTG------------------------------------TTTTGGCGC---CTTATGATCGGTAGCATAGTTATGCTGGCGGCTGGTTACTTGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGCGCT------------------TGGCTTGGG---TTCATCGTCGGCATAGTGGGTTGGGCATACATCTTGTATGAAATC---------------TTC------TTT---GGAGAAGCGGGCAAAGTTGCTGCTGAA------AAA---GCTCCAGCGTCAGTG---CAA---TCT---GCA---TTT---TCA---ACAATG---CGTTGGATTGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGSIVMLAAGYLGE---A------G--Y-----------I----------------------SA------WLG-FIVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_KJ927116 [III-Alpha4-ARCTIC42C05] PRGD_OTU005b_537b0e115d92d1df4cb78606b1ffceb9 gb|KJ927116| PRGD_OTU005b_537b0e115d92d1df4cb78606b1ffceb9, putative proteorhodopsin gene, partial cds. PRGD_OTU005b_537b0e115d92d1df4cb78606b1ffceb9, putative proteorhodopsin gene, partial cds. KJ927116 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683) CTCATCACAGTGCCGCTTCTAATGGTTGAATTCTACCTCATCCTTCGTGCGATTACAGCGGTTTCAGGTGGTGTATTTTGGCGCCTTATGATCGGTAGCATAGTTATGCTGGCGGCTGGTTACTTGGGCGAAGCTGGCTACATCAGCGCTTGGCTTGGGTTCATCGTCGGCATAGTGGGTTGGGCATACATCTTGTATGAAATCTTCTTTGGAGAAGCGGGCAAAGTTGCTGCTGAAAAAGCTCCAGCGTCAGTGCAATCTGCATTCTCAACAATGCGTTGGATTGTTACAATT LITVPLLMVEFYLILRAITAVSGGVFWRLMIGSIVMLAAGYLGEAGYISAWLGFIVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTGCCGCTTCTAATGGTTGAATTCTACCTCATCCTTCGTGCG---------ATT---ACAGCGGTTTCAGGT---GGTGTA------------------------------------TTTTGGCGC---CTTATGATCGGTAGCATAGTTATGCTGGCGGCTGGTTACTTGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGCGCT------------------TGGCTTGGG---TTCATCGTCGGCATAGTGGGTTGGGCATACATCTTGTATGAAATC---------------TTC------TTT---GGAGAAGCGGGCAAAGTTGCTGCTGAA------AAA---GCTCCAGCGTCAGTG---CAA---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGSIVMLAAGYLGE---A------G--Y-----------I----------------------SA------WLG-FIVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_KJ927110 [III-Alpha4-ARCTIC42C05] PRGD_OTU005b_1d8246ed2b30f0463bf83e9addfe0701 gb|KJ927110| PRGD_OTU005b_1d8246ed2b30f0463bf83e9addfe0701, putative proteorhodopsin gene, partial cds. PRGD_OTU005b_1d8246ed2b30f0463bf83e9addfe0701, putative proteorhodopsin gene, partial cds. KJ927110 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (67.49, -168.12) CTCATCACAGTGCCGCTTCTAATGGTTGAATTCTACCTCATCCTTCGTGCGATTACAGCCGTTTCAGGTGGTGTATTTTGGCGCCTTATGATCGGTAGCATAGTAATGCTGGCGGCTGGTTACTTGGGCGAAGCTGGCTATATCAGCGCTTGGCTTGGATTCATCGTCGGCATAGTGGGTTGGGCATACATCTTGTATGAAATCTTCTTCGGAGAAGCGGGCAAAGTTGCTGCTGAAAAAGCTCCAGCGTCAGTGCAATCTGCATTCTCAACAATGCGTTGGATTGTTACAATT LITVPLLMVEFYLILRAITAVSGGVFWRLMIGSIVMLAAGYLGEAGYISAWLGFIVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTGCCGCTTCTAATGGTTGAATTCTACCTCATCCTTCGTGCG---------ATT---ACAGCCGTTTCAGGT---GGTGTA------------------------------------TTTTGGCGC---CTTATGATCGGTAGCATAGTAATGCTGGCGGCTGGTTACTTGGGCGAA---------GCT------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AGCGCT------------------TGGCTTGGA---TTCATCGTCGGCATAGTGGGTTGGGCATACATCTTGTATGAAATC---------------TTC------TTC---GGAGAAGCGGGCAAAGTTGCTGCTGAA------AAA---GCTCCAGCGTCAGTG---CAA---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGSIVMLAAGYLGE---A------G--Y-----------I----------------------SA------WLG-FIVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_KJ927126 [III-Alpha4-ARCTIC42C05] PRGD_OTU005b_89e0ec0314574edb2d2d6639d90328c6 gb|KJ927126| PRGD_OTU005b_89e0ec0314574edb2d2d6639d90328c6, putative proteorhodopsin gene, partial cds. PRGD_OTU005b_89e0ec0314574edb2d2d6639d90328c6, putative proteorhodopsin gene, partial cds. KJ927126 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683) CTCATCACAGTGCCGCTTCTAATGGTTGAATTCTACCTCATCCTTCGTGCGATTACAGCCGTTTCAGGTGGTGTATTTTGGCGCCTTATGATCGGTAGCATAGTAATGCTGGCGGCTGGTTACTTGGGCGAAGCTGGCTACATCAGCGCTTGGCTTGGGTTCATCGTCGGCATAGTGGGTTGGGCATACATCTTGTATGAAATCTTTTTTGGAGAAGCGGGCAAAGTTGCTGCTGAAAAAGCTCCAGAGTCAGTGCAATCTGCATTCTCAACAATGCGTTGGATTGTTACAATT LITVPLLMVEFYLILRAITAVSGGVFWRLMIGSIVMLAAGYLGEAGYISAWLGFIVGIVGWAYILYEIFFGEAGKVAAEKAPESVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTGCCGCTTCTAATGGTTGAATTCTACCTCATCCTTCGTGCG---------ATT---ACAGCCGTTTCAGGT---GGTGTA------------------------------------TTTTGGCGC---CTTATGATCGGTAGCATAGTAATGCTGGCGGCTGGTTACTTGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGCGCT------------------TGGCTTGGG---TTCATCGTCGGCATAGTGGGTTGGGCATACATCTTGTATGAAATC---------------TTT------TTT---GGAGAAGCGGGCAAAGTTGCTGCTGAA------AAA---GCTCCAGAGTCAGTG---CAA---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGSIVMLAAGYLGE---A------G--Y-----------I----------------------SA------WLG-FIVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APESV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_KJ927130 [III-Alpha4-ARCTIC42C05] PRGD_OTU005b_94bfeb5e4845e68763e834307d04f125 gb|KJ927130| PRGD_OTU005b_94bfeb5e4845e68763e834307d04f125, putative proteorhodopsin gene, partial cds. PRGD_OTU005b_94bfeb5e4845e68763e834307d04f125, putative proteorhodopsin gene, partial cds. KJ927130 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781) CTCATCACAGTGCCGCTTTTGATGGTTGAATTTTACCTCATCCTTCGTGCAATCACTGCTGTTTCAGGTGGTGTATTTTGGCGCCTTATGATCGGCACCATGGTAATGTTGGCGGCAGGTTACATGGGCGAAGCTGGCTACATCAGTGCTTGGCTTGGCTTTATCGTCGGCATAGTCGGCTGGGCATACATCTTGTATGAAATCTTCTTTGGTGAAGCCGGTAAGGTTGCTGCAGAGAAAGCTCCAGCATCAGTTCAATCTGCATTCTCAACGATGCGTTGGATTGTTACAATC LITVPLLMVEFYLILRAITAVSGGVFWRLMIGTMVMLAAGYMGEAGYISAWLGFIVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTGCCGCTTTTGATGGTTGAATTTTACCTCATCCTTCGTGCA---------ATC---ACTGCTGTTTCAGGT---GGTGTA------------------------------------TTTTGGCGC---CTTATGATCGGCACCATGGTAATGTTGGCGGCAGGTTACATGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGTGCT------------------TGGCTTGGC---TTTATCGTCGGCATAGTCGGCTGGGCATACATCTTGTATGAAATC---------------TTC------TTT---GGTGAAGCCGGTAAGGTTGCTGCAGAG------AAA---GCTCCAGCATCAGTT---CAA---TCT---GCA---TTC---TCA---ACGATG---CGTTGGATTGTTACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_KJ927107 [III-Alpha4-ARCTIC42C05] PRGD_OTU005b_17ead414f56eae2316ad5c371aa53fe7 gb|KJ927107| PRGD_OTU005b_17ead414f56eae2316ad5c371aa53fe7, putative proteorhodopsin gene, partial cds. PRGD_OTU005b_17ead414f56eae2316ad5c371aa53fe7, putative proteorhodopsin gene, partial cds. KJ927107 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781), English Channel (48.7717, -3.9683) CTCATCACAGTGCCACTTTTGATGGTTGAATTCTACCTCATCCTTCGTGCGATCACTGCTGTGTCAGGTGGCGTATTTTGGCGCCTTATGATTGGCACCCTGGTAATGTTGGCAGCAGGTTACATGGGCGAAGCTGGCTACATCAGCGCTTGGCTCGGCTTTATCGTCGGCATAGTCGGCTGGGCATACATCTTGTATGAAATCTTCTTTGGTGAAGCCGGTAAGGTTGCTGCAGAGAAAGCTCCAGCATCAGTTCAATCTGCATTCTCAACGATGCGTTGGATTGTTACAATC LITVPLLMVEFYLILRAITAVSGGVFWRLMIGTLVMLAAGYMGEAGYISAWLGFIVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTGCCACTTTTGATGGTTGAATTCTACCTCATCCTTCGTGCG---------ATC---ACTGCTGTGTCAGGT---GGCGTA------------------------------------TTTTGGCGC---CTTATGATTGGCACCCTGGTAATGTTGGCAGCAGGTTACATGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGCGCT------------------TGGCTCGGC---TTTATCGTCGGCATAGTCGGCTGGGCATACATCTTGTATGAAATC---------------TTC------TTT---GGTGAAGCCGGTAAGGTTGCTGCAGAG------AAA---GCTCCAGCATCAGTT---CAA---TCT---GCA---TTC---TCA---ACGATG---CGTTGGATTGTTACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTLVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_KJ927113 [III-Alpha4-ARCTIC42C05] PRGD_OTU005b_38d58a364e3d98f467ed3cb63f2b07b9 gb|KJ927113| PRGD_OTU005b_38d58a364e3d98f467ed3cb63f2b07b9, putative proteorhodopsin gene, partial cds. PRGD_OTU005b_38d58a364e3d98f467ed3cb63f2b07b9, putative proteorhodopsin gene, partial cds. KJ927113 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781) CTCATCACAGTGCCACTTTTGATGGTTGAATTCTACCTCATCCTTCGTGCGATCACTGCTGTGTCAGGTGGCGTATTTTGGCGCCTTATGATCGGTACCTTGGTTATGCTCGCTGCCGGCTACATGGGCGAAGCTGGCTACATCAGCGCTTGGCTCGGCTTTATCGTCGGCATAGTCGGCTGGGCATACATCTTGTATGAAATCTTCTTTGGTGAAGCCGGTAAGGTTGCTGCAGAGAAAGCTCCAGCATCAGTTCAATCTGCATTCTCAACGATGCGTTGGATTGTTACAATC LITVPLLMVEFYLILRAITAVSGGVFWRLMIGTLVMLAAGYMGEAGYISAWLGFIVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTGCCACTTTTGATGGTTGAATTCTACCTCATCCTTCGTGCG---------ATC---ACTGCTGTGTCAGGT---GGCGTA------------------------------------TTTTGGCGC---CTTATGATCGGTACCTTGGTTATGCTCGCTGCCGGCTACATGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGCGCT------------------TGGCTCGGC---TTTATCGTCGGCATAGTCGGCTGGGCATACATCTTGTATGAAATC---------------TTC------TTT---GGTGAAGCCGGTAAGGTTGCTGCAGAG------AAA---GCTCCAGCATCAGTT---CAA---TCT---GCA---TTC---TCA---ACGATG---CGTTGGATTGTTACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTLVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_KJ927105 [III-Alpha4-ARCTIC42C05] PRGD_OTU005b_0b19ce2931877afeb1f219400d2be18a gb|KJ927105| PRGD_OTU005b_0b19ce2931877afeb1f219400d2be18a, putative proteorhodopsin gene, partial cds. PRGD_OTU005b_0b19ce2931877afeb1f219400d2be18a, putative proteorhodopsin gene, partial cds. KJ927105 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781) CTGATCACAGTGCCGCTTTTGATGGTTGAGTTCTACCTCATCCTTCGTGCGATTACTGCTGTTTCAGGCGGCGTATTCTGGCGCCTTATGATCGGTACCTTGGTTATGCTCGCTGCCGGCTACATGGGCGAAGCTGGCTACATCAGCGCTTGGCTTGGCTTTATCGTCGGCATAGTCGGCTGGGCATACATCTTGTATGAAATCTTCTTTGGCGAAGCAGGTAAGGTTGCCGCAGAGAAAGCTCCAGCATCGGTACAATCTGCATTCTCAACAATGCGTTGGATTGTTACAATT LITVPLLMVEFYLILRAITAVSGGVFWRLMIGTLVMLAAGYMGEAGYISAWLGFIVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTGCCGCTTTTGATGGTTGAGTTCTACCTCATCCTTCGTGCG---------ATT---ACTGCTGTTTCAGGC---GGCGTA------------------------------------TTCTGGCGC---CTTATGATCGGTACCTTGGTTATGCTCGCTGCCGGCTACATGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGCGCT------------------TGGCTTGGC---TTTATCGTCGGCATAGTCGGCTGGGCATACATCTTGTATGAAATC---------------TTC------TTT---GGCGAAGCAGGTAAGGTTGCCGCAGAG------AAA---GCTCCAGCATCGGTA---CAA---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTLVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_KJ927108 [III-Alpha4-ARCTIC42C05] PRGD_OTU005b_19d07e3f6c862ca3a78099545e24d91a gb|KJ927108| PRGD_OTU005b_19d07e3f6c862ca3a78099545e24d91a, putative proteorhodopsin gene, partial cds. PRGD_OTU005b_19d07e3f6c862ca3a78099545e24d91a, putative proteorhodopsin gene, partial cds. KJ927108 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781) CTGATCACAGTGCCGCTTTTGATGGTTGAGTTCTACCTCATCCTTCGTGCGATTACTGCTGTTTCAGGCGGCGTATTCTGGCGCCTTATGATCGGTACCTTGGTTATGCTCGCTGCCGGCTACATGGGCGAAGCTGGCTACATCAGCGCTTGGCTTGGCTTCATAGTTGGCATAGTGGGTTGGGCATACATTTTGTATGAAATCTTCTTTGGCGAAGCAGGTAAGGTTGCCGCAGAGAAAGCTCCAGCATCGGTACAATCTGCATTCTCAACAATGCGTTGGATTGTTACAATT LITVPLLMVEFYLILRAITAVSGGVFWRLMIGTLVMLAAGYMGEAGYISAWLGFIVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTGCCGCTTTTGATGGTTGAGTTCTACCTCATCCTTCGTGCG---------ATT---ACTGCTGTTTCAGGC---GGCGTA------------------------------------TTCTGGCGC---CTTATGATCGGTACCTTGGTTATGCTCGCTGCCGGCTACATGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGCGCT------------------TGGCTTGGC---TTCATAGTTGGCATAGTGGGTTGGGCATACATTTTGTATGAAATC---------------TTC------TTT---GGCGAAGCAGGTAAGGTTGCCGCAGAG------AAA---GCTCCAGCATCGGTA---CAA---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTLVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_KJ927123 [III-Alpha4-ARCTIC42C05] PRGD_OTU005b_7ad2f013ce24e8b7668231fa048f9e22 gb|KJ927123| PRGD_OTU005b_7ad2f013ce24e8b7668231fa048f9e22, putative proteorhodopsin gene, partial cds. PRGD_OTU005b_7ad2f013ce24e8b7668231fa048f9e22, putative proteorhodopsin gene, partial cds. KJ927123 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; ; 67.49, -168.12) CTGATCACAGTGCCGCTTTTGATGGTTGAGTTCTACCTCATCCTTCGTGCGATTACTGCTGTTTCAGGCGGCGTATTTTGGCGCCTTATGATCGGTACCTTGGTTATGCTCGCTGCCGGCTACATGGGCGAAGCTGGCTACATCAGCGCTTGGCTCGGCTTTATCGTCGGCATAGTCGGCTGGGCATACATCTTGTATGAAATCTTCTTTGGCGAAGCAGGCAAGGTTGCAGCAGAAAAAGCTCCAGCATCTGTTCAATCTGCATTCTCAACAATGCGTTGGATTGTTACAATT LITVPLLMVEFYLILRAITAVSGGVFWRLMIGTLVMLAAGYMGEAGYISAWLGFIVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTGCCGCTTTTGATGGTTGAGTTCTACCTCATCCTTCGTGCG---------ATT---ACTGCTGTTTCAGGC---GGCGTA------------------------------------TTTTGGCGC---CTTATGATCGGTACCTTGGTTATGCTCGCTGCCGGCTACATGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGCGCT------------------TGGCTCGGC---TTTATCGTCGGCATAGTCGGCTGGGCATACATCTTGTATGAAATC---------------TTC------TTT---GGCGAAGCAGGCAAGGTTGCAGCAGAA------AAA---GCTCCAGCATCTGTT---CAA---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTLVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_KJ927128 [III-Alpha4-ARCTIC42C05] PRGD_OTU005b_900ca72b7fec4a54cfb7d04d09a59c0c gb|KJ927128| PRGD_OTU005b_900ca72b7fec4a54cfb7d04d09a59c0c, putative proteorhodopsin gene, partial cds. PRGD_OTU005b_900ca72b7fec4a54cfb7d04d09a59c0c, putative proteorhodopsin gene, partial cds. KJ927128 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; ; 67.49, -168.12) CTGATCACAGTGCCGCTTTTGATGGTTGAGTTCTACCTCATCCTTCGTGCGATTACTGCTGTTTCAGGCGGCGTATTCTGGCGCCTTATGATCGGTACCTTGGTTATGCTCGCTGCCGGCTACATGGGCGAAGCTGGCTACATCAGCGCTTGGCTCGGGTTCATTGTTGGTATCGTAGGTTGGGCATACATTTTGTATGAAATCTTCTTTGGCGAAGCAGGCAAGGTTGCAGCAGAAAAAGCTCCAGCATCTGTTCAATCTGCATTCTCAACAATGCGTTGGATTGTTACAATT LITVPLLMVEFYLILRAITAVSGGVFWRLMIGTLVMLAAGYMGEAGYISAWLGFIVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTGCCGCTTTTGATGGTTGAGTTCTACCTCATCCTTCGTGCG---------ATT---ACTGCTGTTTCAGGC---GGCGTA------------------------------------TTCTGGCGC---CTTATGATCGGTACCTTGGTTATGCTCGCTGCCGGCTACATGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGCGCT------------------TGGCTCGGG---TTCATTGTTGGTATCGTAGGTTGGGCATACATTTTGTATGAAATC---------------TTC------TTT---GGCGAAGCAGGCAAGGTTGCAGCAGAA------AAA---GCTCCAGCATCTGTT---CAA---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTLVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_KJ927140 [III-Alpha4-ARCTIC42C05] PRGD_OTU005b_f32811cb9eff5fc3d168c3b5fcd74616 gb|KJ927140| PRGD_OTU005b_f32811cb9eff5fc3d168c3b5fcd74616, putative proteorhodopsin gene, partial cds. PRGD_OTU005b_f32811cb9eff5fc3d168c3b5fcd74616, putative proteorhodopsin gene, partial cds. KJ927140 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTGATCACAGTGCCGCTTTTGATGGTTGAGTTCTACCTCATCCTTCGTGCGATTACTGCTGTTTCAGGCGGCGTATTTTGGCGCCTTATGATCGGTACCTTGGTTATGCTCGCTGCCGGCTACATGGGCGAAGCTGGCTACATCAGCGCTTGGCTCGGCTTTATCGTCGGCATAGTCGGCTGGGCATACATCTTGTATGAAATCTTCTTTGGTGAAGCCGGTAAGGTTGCTGCAGAGAAAGCTCCAGCATCAGTTCAATCTGCATTCTCAACGATGCGTTGGATTGTTACAATC LITVPLLMVEFYLILRAITAVSGGVFWRLMIGTLVMLAAGYMGEAGYISAWLGFIVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTGCCGCTTTTGATGGTTGAGTTCTACCTCATCCTTCGTGCG---------ATT---ACTGCTGTTTCAGGC---GGCGTA------------------------------------TTTTGGCGC---CTTATGATCGGTACCTTGGTTATGCTCGCTGCCGGCTACATGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGCGCT------------------TGGCTCGGC---TTTATCGTCGGCATAGTCGGCTGGGCATACATCTTGTATGAAATC---------------TTC------TTT---GGTGAAGCCGGTAAGGTTGCTGCAGAG------AAA---GCTCCAGCATCAGTT---CAA---TCT---GCA---TTC---TCA---ACGATG---CGTTGGATTGTTACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTLVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_KJ927118 [III-Alpha4-ARCTIC42C05] PRGD_OTU005b_6462abd4b4a481aea21c155b0d1865f7 gb|KJ927118| PRGD_OTU005b_6462abd4b4a481aea21c155b0d1865f7, putative proteorhodopsin gene, partial cds. PRGD_OTU005b_6462abd4b4a481aea21c155b0d1865f7, putative proteorhodopsin gene, partial cds. KJ927118 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833) CTGATCACAGTGCCGCTTTTGATGGTTGAGTTCTACCTCATCCTTCGTGCGATTACTGCTGTTTCAGGCGGCGTATTCTGGCGCCTTATGATCGGCACCTTGGTTATGCTCGCTGCCGGCTACATGGGCGAAGCTGGCTACATCAGCGCTTGGCTCGGCTTTATCGTCGGCATAGTCGGCTGGGCATACATCTTGTATGAAATCTTCTTTGGTGAAGCCGGTAAGGTTGCGGCAGAGAAAGCTCCAGCATCAGTTCAATCTGCATTCTCAACGATGCGTTGGATTGTTACAATT LITVPLLMVEFYLILRAITAVSGGVFWRLMIGTLVMLAAGYMGEAGYISAWLGFIVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTGCCGCTTTTGATGGTTGAGTTCTACCTCATCCTTCGTGCG---------ATT---ACTGCTGTTTCAGGC---GGCGTA------------------------------------TTCTGGCGC---CTTATGATCGGCACCTTGGTTATGCTCGCTGCCGGCTACATGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGCGCT------------------TGGCTCGGC---TTTATCGTCGGCATAGTCGGCTGGGCATACATCTTGTATGAAATC---------------TTC------TTT---GGTGAAGCCGGTAAGGTTGCGGCAGAG------AAA---GCTCCAGCATCAGTT---CAA---TCT---GCA---TTC---TCA---ACGATG---CGTTGGATTGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTLVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_KJ927125 [III-Alpha4-ARCTIC42C05] PRGD_OTU005b_85c9d14239bcda821fb0ef71f346e27b gb|KJ927125| PRGD_OTU005b_85c9d14239bcda821fb0ef71f346e27b, putative proteorhodopsin gene, partial cds. PRGD_OTU005b_85c9d14239bcda821fb0ef71f346e27b, putative proteorhodopsin gene, partial cds. KJ927125 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; ; 67.49, -168.12) TTAATCACTGTACCACTTCTGATGGTAGAATTTTACCTTATTTTACGTGCCATCACAAAAGTATCTGGCGGAGTATTCTGGCGTCTCATGATTGGCACCATGGTGATGCTCGCTGCGGGTTACATGGGCGAAGCAGGTTACATCAGCGCATGGCTTGGGTTTATCGTAGGCATGGTAGGCTGGGCATACATCTTGTATGAAATCTTCTTTGGTGAAGCCGGTAAGGTTGCTGCAGAGAAAGCTCCAGCATCAGTTCAATCTGCATTCTCAACGATGCGTTGGATTGTTACAATC LITVPLLMVEFYLILRAITKVSGGVFWRLMIGTMVMLAAGYMGEAGYISAWLGFIVGMVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCACTTCTGATGGTAGAATTTTACCTTATTTTACGTGCC---------ATC---ACAAAAGTATCTGGC---GGAGTA------------------------------------TTCTGGCGT---CTCATGATTGGCACCATGGTGATGCTCGCTGCGGGTTACATGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AGCGCA------------------TGGCTTGGG---TTTATCGTAGGCATGGTAGGCTGGGCATACATCTTGTATGAAATC---------------TTC------TTT---GGTGAAGCCGGTAAGGTTGCTGCAGAG------AAA---GCTCCAGCATCAGTT---CAA---TCT---GCA---TTC---TCA---ACGATG---CGTTGGATTGTTACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TKVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGMVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_KJ927129 [III-Alpha4-ARCTIC42C05] PRGD_OTU005b_90aa9c9c3a8aff17f30e34ac2c485d65 gb|KJ927129| PRGD_OTU005b_90aa9c9c3a8aff17f30e34ac2c485d65, putative proteorhodopsin gene, partial cds. PRGD_OTU005b_90aa9c9c3a8aff17f30e34ac2c485d65, putative proteorhodopsin gene, partial cds. KJ927129 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; ; 67.49, -168.12) TTAATCACTGTACCACTTCTGATGGTAGAATTTTACCTTATTTTACGTGCCATCACAAAAGTATCTGGCGGAGTATTCTGGCGTCTCATGATTGGCACCATGGTGATGCTCGCTGCGGGTTACATGGGCGAAGCTGGCTACATCAGCGCTTGGCTCGGCTTTATCGTCGGCATAGTCGGCTGGGCATACATCTTGTATGAAATCTTCTTTGGTGAAGCCGGTAAGGTTGCTGCAGAGAAAGCTCCAGCATCAGTTCAATCTGCATTCTCAACGATGCGTTGGATTGTTACAATC LITVPLLMVEFYLILRAITKVSGGVFWRLMIGTMVMLAAGYMGEAGYISAWLGFIVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCACTTCTGATGGTAGAATTTTACCTTATTTTACGTGCC---------ATC---ACAAAAGTATCTGGC---GGAGTA------------------------------------TTCTGGCGT---CTCATGATTGGCACCATGGTGATGCTCGCTGCGGGTTACATGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGCGCT------------------TGGCTCGGC---TTTATCGTCGGCATAGTCGGCTGGGCATACATCTTGTATGAAATC---------------TTC------TTT---GGTGAAGCCGGTAAGGTTGCTGCAGAG------AAA---GCTCCAGCATCAGTT---CAA---TCT---GCA---TTC---TCA---ACGATG---CGTTGGATTGTTACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TKVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_KJ927122 [III-Alpha4-ARCTIC42C05] PRGD_OTU005b_7860f67a28ffbd8641fb5dccd9335eb5 gb|KJ927122| PRGD_OTU005b_7860f67a28ffbd8641fb5dccd9335eb5, putative proteorhodopsin gene, partial cds. PRGD_OTU005b_7860f67a28ffbd8641fb5dccd9335eb5, putative proteorhodopsin gene, partial cds. KJ927122 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; ; 67.49, -168.12) TTAATCACTGTACCACTTCTGATGGTAGAATTTTACCTTATTTTACGTGCCATCACAAAAGTATCTGGCGGAGTATTCTGGCGTCTCATGATTGGCACCATGGTGATGCTCGCTGCCGGCTACATGGGCGAAGCTGGCTACATCAGCGCTTGGCTCGGCTTTATCGTCGGCATAGTCGGCTGGGCATACATCTTGTATGAAATCTTCTTTGGTGAAGCCGGTAAGGTTGCTGCAGAGAAAGCTCCAGCATCAGTTCAATCTGCATTCTCAACGATGCGTTGGATTGTTACAATC LITVPLLMVEFYLILRAITKVSGGVFWRLMIGTMVMLAAGYMGEAGYISAWLGFIVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCACTTCTGATGGTAGAATTTTACCTTATTTTACGTGCC---------ATC---ACAAAAGTATCTGGC---GGAGTA------------------------------------TTCTGGCGT---CTCATGATTGGCACCATGGTGATGCTCGCTGCCGGCTACATGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGCGCT------------------TGGCTCGGC---TTTATCGTCGGCATAGTCGGCTGGGCATACATCTTGTATGAAATC---------------TTC------TTT---GGTGAAGCCGGTAAGGTTGCTGCAGAG------AAA---GCTCCAGCATCAGTT---CAA---TCT---GCA---TTC---TCA---ACGATG---CGTTGGATTGTTACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TKVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_KJ927103 [III-Alpha4-ARCTIC42C05] PRGD_OTU005b_0387a25c842c63a75f4744b385992525 gb|KJ927103| PRGD_OTU005b_0387a25c842c63a75f4744b385992525, putative proteorhodopsin gene, partial cds. PRGD_OTU005b_0387a25c842c63a75f4744b385992525, putative proteorhodopsin gene, partial cds. KJ927103 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Bering strait marine 67.49 -168.12 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (67.49, -168.12) TTAATCACTGTGCCACTTTTGATGGTAGAATTTTACCTCATTTTACGTGCAATCACAAAAGTATCTGGCGGAGTATTCTGGCGTCTTATGATTGGCACCATGGTGATGCTCGCTGCGGGTTACATGGGCGAAGCAGGTTACATCAGCGCATGGCTTGGGTTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATTTTTCTTGGCGAAGCAGGTCAAGTTGCTGCCAACGAAGCTCCAGAATCTGTCAAATCAGCATTCTCAACAATGCGTTGGATTGTTACAATC LITVPLLMVEFYLILRAITKVSGGVFWRLMIGTMVMLAAGYMGEAGYISAWLGFIVGMVGWAYILYEIFLGEAGQVAANEAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCACTTTTGATGGTAGAATTTTACCTCATTTTACGTGCA---------ATC---ACAAAAGTATCTGGC---GGAGTA------------------------------------TTCTGGCGT---CTTATGATTGGCACCATGGTGATGCTCGCTGCGGGTTACATGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AGCGCA------------------TGGCTTGGG---TTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATT---------------TTT------CTT---GGCGAAGCAGGTCAAGTTGCTGCCAAC------GAA---GCTCCAGAATCTGTC---AAA---TCA---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TKVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGMVGWAYILYEI-----F--L-GEAGQVAAN--E-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_KJ927111 [III-Alpha4-ARCTIC42C05] PRGD_OTU005b_232845f81a6bc4f2e60c2ededc3367cf gb|KJ927111| PRGD_OTU005b_232845f81a6bc4f2e60c2ededc3367cf, putative proteorhodopsin gene, partial cds. PRGD_OTU005b_232845f81a6bc4f2e60c2ededc3367cf, putative proteorhodopsin gene, partial cds. KJ927111 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097), Arctic Ocean-Pacific side (72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) TTAATCACCGTACCACTTCTGATGGTAGAGTTTTACCTCATCTTACGTGCCATCACAAAAGTATCTGGCGGAGTATTCTGGCGTCTCATGATTGGCACCATGGTTATGCTTGCTGCAGGTTACATGGGCGAAGCAGGTTACATCAGCGCATGGCTTGGGTTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATTTTTCTTGGAGAAGCAGGTCAAGTTGCTGCCAACGAAGCTCCCGAATCTGTCAAGTCAGCATTCTCAACAATGCGTTGGATTGTTACAATC LITVPLLMVEFYLILRAITKVSGGVFWRLMIGTMVMLAAGYMGEAGYISAWLGFIVGMVGWAYILYEIFLGEAGQVAANEAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACCGTACCACTTCTGATGGTAGAGTTTTACCTCATCTTACGTGCC---------ATC---ACAAAAGTATCTGGC---GGAGTA------------------------------------TTCTGGCGT---CTCATGATTGGCACCATGGTTATGCTTGCTGCAGGTTACATGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AGCGCA------------------TGGCTTGGG---TTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATT---------------TTT------CTT---GGAGAAGCAGGTCAAGTTGCTGCCAAC------GAA---GCTCCCGAATCTGTC---AAG---TCA---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TKVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGMVGWAYILYEI-----F--L-GEAGQVAAN--E-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_KJ927139 [III-Alpha4-ARCTIC42C05] PRGD_OTU005b_f0996be6f5ac074658d04568ed1839f6 gb|KJ927139| PRGD_OTU005b_f0996be6f5ac074658d04568ed1839f6, putative proteorhodopsin gene, partial cds. PRGD_OTU005b_f0996be6f5ac074658d04568ed1839f6, putative proteorhodopsin gene, partial cds. KJ927139 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683) TTAATCACTGTACCACTTCTGATGATAGAATTTTACCTCATTTTACGTGCCATCACAAAAGTATCTGGCGGAGTATTCTGGCGTCTCATGATTGGCACCTTGGTGATGCTCGCTGGGGGTTACATGGGCGAAGCAGGTTACATCAGCGCATGGCTAGGGTTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATTTTTCTTGGCGAAGCAGGTCAAGTTGCTGCCAACGAAGCTCCAGAATCTGTCAAGTCAGCATTCTCAACAATGCGTTGGATTGTTACAATC LITVPLLMIEFYLILRAITKVSGGVFWRLMIGTLVMLAGGYMGEAGYISAWLGFIVGMVGWAYILYEIFLGEAGQVAANEAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCACTTCTGATGATAGAATTTTACCTCATTTTACGTGCC---------ATC---ACAAAAGTATCTGGC---GGAGTA------------------------------------TTCTGGCGT---CTCATGATTGGCACCTTGGTGATGCTCGCTGGGGGTTACATGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AGCGCA------------------TGGCTAGGG---TTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATT---------------TTT------CTT---GGCGAAGCAGGTCAAGTTGCTGCCAAC------GAA---GCTCCAGAATCTGTC---AAG---TCA---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TKVSG-GV------------FWR-LMIGTLVMLAGGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGMVGWAYILYEI-----F--L-GEAGQVAAN--E-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_KJ927102 [III-Alpha4-ARCTIC42C05] PRGD_OTU005b_otuREP_ea9418ba62c8aa318a5e2e3ac6c1c8d7 gb|KJ927102| PRGD_OTU005b_otuREP_ea9418ba62c8aa318a5e2e3ac6c1c8d7, putative proteorhodopsin gene, partial cds. PRGD_OTU005b_otuREP_ea9418ba62c8aa318a5e2e3ac6c1c8d7, putative proteorhodopsin gene, partial cds. KJ927102 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Bering strait marine 67.49 -168.12 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACTGTACCACTTCTGATGGTAGAATTTTACCTTATTTTACGTGCCATCACAAAAGTATCTGGCGGAGTATTCTGGCGTCTCATGATTGGCACCATGGTGATGCTCGCTGCGGGTTACATGGGCGAAGCAGGTTACATCAGCGCATGGCTTGGGTTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATTTTTCTTGGCGAAGCAGGTCAAGTTGCTGCCAACGAAGCTCCAGAATCTGTCAAGTCAGCATTCTCAACAATGCGTTGGATTGTTACAATC LITVPLLMVEFYLILRAITKVSGGVFWRLMIGTMVMLAAGYMGEAGYISAWLGFIVGMVGWAYILYEIFLGEAGQVAANEAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCACTTCTGATGGTAGAATTTTACCTTATTTTACGTGCC---------ATC---ACAAAAGTATCTGGC---GGAGTA------------------------------------TTCTGGCGT---CTCATGATTGGCACCATGGTGATGCTCGCTGCGGGTTACATGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AGCGCA------------------TGGCTTGGG---TTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATT---------------TTT------CTT---GGCGAAGCAGGTCAAGTTGCTGCCAAC------GAA---GCTCCAGAATCTGTC---AAG---TCA---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TKVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGMVGWAYILYEI-----F--L-GEAGQVAAN--E-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_KJ927106 [III-Alpha4-ARCTIC42C05] PRGD_OTU005b_1041334ec21068e7a5320055eac2c912 gb|KJ927106| PRGD_OTU005b_1041334ec21068e7a5320055eac2c912, putative proteorhodopsin gene, partial cds. PRGD_OTU005b_1041334ec21068e7a5320055eac2c912, putative proteorhodopsin gene, partial cds. KJ927106 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12) CTGATCACGGTTCCACTCTTGATGGTAGAATTTTACCTTATTTTACGTGCCATCACAAAAGTATCTGGCGGAGTATTCTGGCGTCTCATGATTGGCACCATGGTGATGCTCGCTGCGGGTTACATGGGCGAAGCAGGTTACATCAGCGCATGGCTTGGGTTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATTTTTCTTGGCGAAGCAGGTCAAGTTGCTGCCAACGAAGCTCCAGAATCTGTCAAGTCAGCATTCTCAACAATGCGTTGGATTGTTACAATC LITVPLLMVEFYLILRAITKVSGGVFWRLMIGTMVMLAAGYMGEAGYISAWLGFIVGMVGWAYILYEIFLGEAGQVAANEAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACGGTTCCACTCTTGATGGTAGAATTTTACCTTATTTTACGTGCC---------ATC---ACAAAAGTATCTGGC---GGAGTA------------------------------------TTCTGGCGT---CTCATGATTGGCACCATGGTGATGCTCGCTGCGGGTTACATGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AGCGCA------------------TGGCTTGGG---TTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATT---------------TTT------CTT---GGCGAAGCAGGTCAAGTTGCTGCCAAC------GAA---GCTCCAGAATCTGTC---AAG---TCA---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TKVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGMVGWAYILYEI-----F--L-GEAGQVAAN--E-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_KJ927131 [III-Alpha4-ARCTIC42C05] PRGD_OTU005b_a3d410618174236e457afc66c7cb47cf gb|KJ927131| PRGD_OTU005b_a3d410618174236e457afc66c7cb47cf, putative proteorhodopsin gene, partial cds. PRGD_OTU005b_a3d410618174236e457afc66c7cb47cf, putative proteorhodopsin gene, partial cds. KJ927131 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683) CTAATTACTGTGCCACTCCTAATGATAGAATTTTACCTTATTCTGCGTGCGGTCACAAAGGTCTCTGGTGGCGTATTTTGGCGTCTAATGATTGGTACGATGGTTATGCTCGCAGCGGGCTACATGGGTGAAGCTGGTTACATAAGTGCATGGATCGGGTTTATTGTTGGCATGGTCGGCTGGGCATATATTTTGTATGAGATTTTTCTCGGAGAAGCAGGTAAAATTGCTACTAATGAAGCTCCAGAATCAGTCAAGTCAGCATTTTCAGCAATGCGTTGGATTGTTACAATC LITVPLLMIEFYLILRAVTKVSGGVFWRLMIGTMVMLAAGYMGEAGYISAWIGFIVGMVGWAYILYEIFLGEAGKIATNEAPESVKSAFSAMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTGCCACTCCTAATGATAGAATTTTACCTTATTCTGCGTGCG---------GTC---ACAAAGGTCTCTGGT---GGCGTA------------------------------------TTTTGGCGT---CTAATGATTGGTACGATGGTTATGCTCGCAGCGGGCTACATGGGTGAA---------GCT------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AGTGCA------------------TGGATCGGG---TTTATTGTTGGCATGGTCGGCTGGGCATATATTTTGTATGAGATT---------------TTT------CTC---GGAGAAGCAGGTAAAATTGCTACTAAT------GAA---GCTCCAGAATCAGTC---AAG---TCA---GCA---TTT---TCA---GCAATG---CGTTGGATTGTTACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---V-TKVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------SA------WIG-FIVGMVGWAYILYEI-----F--L-GEAGKIATN--E-APESV-K-S-A-F-S-AM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_KJ927132 [III-Alpha4-ARCTIC42C05] PRGD_OTU005b_afe49c7008b6d711e0e24a9ffc16e2a0 gb|KJ927132| PRGD_OTU005b_afe49c7008b6d711e0e24a9ffc16e2a0, putative proteorhodopsin gene, partial cds. PRGD_OTU005b_afe49c7008b6d711e0e24a9ffc16e2a0, putative proteorhodopsin gene, partial cds. KJ927132 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683) CTAATCACTGTGCCACTCCTAATGATAGAATTTTACCTTATTCTGCGTGCGATCACAAAGGTCTCTGGTGGCGTATTTTGGCGTCTAATGATTGGTACGATGGTTATGCTCGCAGCGGGCTACATGGGTGAAGCTGGTTACATAAGTGCATGGATCGGGTTTATTGTAGGCATGGTCGGCTGGGCATATATTTTGTATGAGATTTTTCTCGGAGAAGCAGGCAAAATTGCTGCTAATGAAGCTCCAGAATCAGTCAAGTCAGCATTTTCAGCAATGCGTTGGATTGTTACAATC LITVPLLMIEFYLILRAITKVSGGVFWRLMIGTMVMLAAGYMGEAGYISAWIGFIVGMVGWAYILYEIFLGEAGKIAANEAPESVKSAFSAMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACTGTGCCACTCCTAATGATAGAATTTTACCTTATTCTGCGTGCG---------ATC---ACAAAGGTCTCTGGT---GGCGTA------------------------------------TTTTGGCGT---CTAATGATTGGTACGATGGTTATGCTCGCAGCGGGCTACATGGGTGAA---------GCT------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AGTGCA------------------TGGATCGGG---TTTATTGTAGGCATGGTCGGCTGGGCATATATTTTGTATGAGATT---------------TTT------CTC---GGAGAAGCAGGCAAAATTGCTGCTAAT------GAA---GCTCCAGAATCAGTC---AAG---TCA---GCA---TTT---TCA---GCAATG---CGTTGGATTGTTACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TKVSG-GV------------FWR-LMIGTMVMLAAGYMGE---A------G--Y-----------I----------------------SA------WIG-FIVGMVGWAYILYEI-----F--L-GEAGKIAAN--E-APESV-K-S-A-F-S-AM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC42C05]_KJ927114 [III-Alpha4-ARCTIC42C05] PRGD_OTU005b_3a50b72171caae24e585760040063058 gb|KJ927114| PRGD_OTU005b_3a50b72171caae24e585760040063058, putative proteorhodopsin gene, partial cds. PRGD_OTU005b_3a50b72171caae24e585760040063058, putative proteorhodopsin gene, partial cds. KJ927114 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC42C05 22G02 37F02-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC42C05 22G02 37F02-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781) CTGATCACAGTGCCGCTTTTGATGGTTGAGTTCTACCTCATCCTTCGTGCGATTACTGCTGTTTCAGGCGGCGTATTCTGGCGCCTTATGATCGGTACCTTGGTTATGCTCGCTGCCGGCTACATGGGCGAAGCTGGCTACATCAGCGCATGGCTTGGGTTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATTTTTCTTGGCGAAGCAGGTCAAGTTGCTGCCAACGAAGCTCCAGAATCTGTCAAGTCAGCATTCTCAACAATGCGTTGGATTGTTACAATC LITVPLLMVEFYLILRAITAVSGGVFWRLMIGTLVMLAAGYMGEAGYISAWLGFIVGMVGWAYILYEIFLGEAGQVAANEAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTGCCGCTTTTGATGGTTGAGTTCTACCTCATCCTTCGTGCG---------ATT---ACTGCTGTTTCAGGC---GGCGTA------------------------------------TTCTGGCGC---CTTATGATCGGTACCTTGGTTATGCTCGCTGCCGGCTACATGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGCGCA------------------TGGCTTGGG---TTTATCGTAGGCATGGTAGGCTGGGCATACATTTTGTATGAGATT---------------TTT------CTT---GGCGAAGCAGGTCAAGTTGCTGCCAAC------GAA---GCTCCAGAATCTGTC---AAG---TCA---GCA---TTC---TCA---ACAATG---CGTTGGATTGTTACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTLVMLAAGYMGE---A------G--Y-----------I----------------------SA------WLG-FIVGMVGWAYILYEI-----F--L-GEAGQVAAN--E-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-b]_KJ927148 [III-Alpha4-b] PRGD_OTU005c_aee3750721aca53422b51c46d2cff44e gb|KJ927148| PRGD_OTU005c_aee3750721aca53422b51c46d2cff44e, putative proteorhodopsin gene, partial cds. PRGD_OTU005c_aee3750721aca53422b51c46d2cff44e, putative proteorhodopsin gene, partial cds. KJ927148 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) CTAATTACAGTGCCACTCTTGATGGTTGAGTTCTACTTAATTCTGCGCGCGATCACCGCAGTTTCTGGTGGAGTATTTTGGCGTCTAATGATTGGTACAGTTGTAATGCTAGCAGCTGGCTACATGGGCGAAGCTGGATACATCAACGTAATGTTAGGTTTCGTAGTAGGTATAGTCGGTTGGGCATACATTCTTTATGAGATCTTCTTTGGTGAAGCTGGAAAAGTTGCGGCAGAAAAAGCCCCAGCATCGGTACAATCTGCATTCTCAACAATGCGTTGGATCGTAACAATT LITVPLLMVEFYLILRAITAVSGGVFWRLMIGTVVMLAAGYMGEAGYINVMLGFVVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTGCCACTCTTGATGGTTGAGTTCTACTTAATTCTGCGCGCG---------ATC---ACCGCAGTTTCTGGT---GGAGTA------------------------------------TTTTGGCGT---CTAATGATTGGTACAGTTGTAATGCTAGCAGCTGGCTACATGGGCGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGTA------------------ATGTTAGGT---TTCGTAGTAGGTATAGTCGGTTGGGCATACATTCTTTATGAGATC---------------TTC------TTT---GGTGAAGCTGGAAAAGTTGCGGCAGAA------AAA---GCCCCAGCATCGGTA---CAA---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATCGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTVVMLAAGYMGE---A------G--Y-----------I----------------------NV------MLG-FVVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-b]_KJ927141 [III-Alpha4-b] PRGD_OTU005c_otuREP_3c095756d1a6b425f31f07cd854a4db9 gb|KJ927141| PRGD_OTU005c_otuREP_3c095756d1a6b425f31f07cd854a4db9, putative proteorhodopsin gene, partial cds. PRGD_OTU005c_otuREP_3c095756d1a6b425f31f07cd854a4db9, putative proteorhodopsin gene, partial cds. KJ927141 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTAATTACAGTGCCACTCTTGATGGTTGAGTTCTACTTAATTCTGCGCGCGATTACCGCAGTTTCTGGTGGAGTATTCTGGCGTCTAATGATTGGTACAGTTGTAATGCTAGCAGCTGGCTATATGGGCGAAGCTGGATACATCAACGTAATGTTAGGTTTCGTAGTAGGTATAGTCGGTTGGGCATACATCCTTTATGAGATCTTCTTTGGTGAAGCTGGAAAAGTTGCGGCAGAAAAAGCCCCAGCATCGGTACAATCTGCATTCTCAACAATGCGTTGGATCGTAACAATT LITVPLLMVEFYLILRAITAVSGGVFWRLMIGTVVMLAAGYMGEAGYINVMLGFVVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTGCCACTCTTGATGGTTGAGTTCTACTTAATTCTGCGCGCG---------ATT---ACCGCAGTTTCTGGT---GGAGTA------------------------------------TTCTGGCGT---CTAATGATTGGTACAGTTGTAATGCTAGCAGCTGGCTATATGGGCGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGTA------------------ATGTTAGGT---TTCGTAGTAGGTATAGTCGGTTGGGCATACATCCTTTATGAGATC---------------TTC------TTT---GGTGAAGCTGGAAAAGTTGCGGCAGAA------AAA---GCCCCAGCATCGGTA---CAA---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATCGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTVVMLAAGYMGE---A------G--Y-----------I----------------------NV------MLG-FVVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-b]_KJ927142 [III-Alpha4-b] PRGD_OTU005c_0b09ec1fab5ed32e23ec3f7f2aff815b gb|KJ927142| PRGD_OTU005c_0b09ec1fab5ed32e23ec3f7f2aff815b, putative proteorhodopsin gene, partial cds. PRGD_OTU005c_0b09ec1fab5ed32e23ec3f7f2aff815b, putative proteorhodopsin gene, partial cds. KJ927142 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (67.49, -168.12) CTAATTACAGTGCCACTCTTGATGGTTGAGTTCTACTTAATTCTGCGCGCGATTACCGCAGTTTCTGGTGGAGTATTCTGGCGTCTAATGATTGGTACAGTTGTAATGCTAGCAGCTGGCTATATGGGCGAAGCTGGATACATCAATACAATGTTAGGTTTCGTGGTAGGTATGGTCGGTTGGGCATACATCCTTTATGAGATTTTCCTTGGTGAAGCTGGAAAAGTTGCGGCGGAAAAAGCCCCGGCATCGGTACAGTCCGCGTTTTCAACAATGCGTTGGATCGTAACAATT LITVPLLMVEFYLILRAITAVSGGVFWRLMIGTVVMLAAGYMGEAGYINTMLGFVVGMVGWAYILYEIFLGEAGKVAAEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTGCCACTCTTGATGGTTGAGTTCTACTTAATTCTGCGCGCG---------ATT---ACCGCAGTTTCTGGT---GGAGTA------------------------------------TTCTGGCGT---CTAATGATTGGTACAGTTGTAATGCTAGCAGCTGGCTATATGGGCGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATACA------------------ATGTTAGGT---TTCGTGGTAGGTATGGTCGGTTGGGCATACATCCTTTATGAGATT---------------TTC------CTT---GGTGAAGCTGGAAAAGTTGCGGCGGAA------AAA---GCCCCGGCATCGGTA---CAG---TCC---GCG---TTT---TCA---ACAATG---CGTTGGATCGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTVVMLAAGYMGE---A------G--Y-----------I----------------------NT------MLG-FVVGMVGWAYILYEI-----F--L-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-b]_KJ927143 [III-Alpha4-b] PRGD_OTU005c_303b7b1651fa74d5f607cf536215b2e6 gb|KJ927143| PRGD_OTU005c_303b7b1651fa74d5f607cf536215b2e6, putative proteorhodopsin gene, partial cds. PRGD_OTU005c_303b7b1651fa74d5f607cf536215b2e6, putative proteorhodopsin gene, partial cds. KJ927143 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATTACGGTGCCACTCTTGATGGTCGAGTTCTACTTAATTCTGCGCGCTATCACCGCAGTTTCCGGTGGAGTATTCTGGCGTCTAATGATCGGTACAGTTGTGATGCTAGCCGCTGGCTACATGGGCGAAGCTGGATACATCAATACAATGTTAGGTTTCGTGGTAGGTATGGTCGGTTGGGCATACATCCTTTATGAGATCTTCCTTGGTGAAGCTGGAAAAGTTGCGGCGGAAAAAGCCCCGGCATCGGTACAGTCCGCGTTTTCAACAATGCGTTGGATCGTAACAATT LITVPLLMVEFYLILRAITAVSGGVFWRLMIGTVVMLAAGYMGEAGYINTMLGFVVGMVGWAYILYEIFLGEAGKVAAEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACGGTGCCACTCTTGATGGTCGAGTTCTACTTAATTCTGCGCGCT---------ATC---ACCGCAGTTTCCGGT---GGAGTA------------------------------------TTCTGGCGT---CTAATGATCGGTACAGTTGTGATGCTAGCCGCTGGCTACATGGGCGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATACA------------------ATGTTAGGT---TTCGTGGTAGGTATGGTCGGTTGGGCATACATCCTTTATGAGATC---------------TTC------CTT---GGTGAAGCTGGAAAAGTTGCGGCGGAA------AAA---GCCCCGGCATCGGTA---CAG---TCC---GCG---TTT---TCA---ACAATG---CGTTGGATCGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTVVMLAAGYMGE---A------G--Y-----------I----------------------NT------MLG-FVVGMVGWAYILYEI-----F--L-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-b]_KJ927149 [III-Alpha4-b] PRGD_OTU005c_df6bd6748e3ada6afe3ba740146fec2b gb|KJ927149| PRGD_OTU005c_df6bd6748e3ada6afe3ba740146fec2b, putative proteorhodopsin gene, partial cds. PRGD_OTU005c_df6bd6748e3ada6afe3ba740146fec2b, putative proteorhodopsin gene, partial cds. KJ927149 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833) CTAATTACAGTGCCACTCTTGATGGTTGAGTTCTACTTAATTCTGCGCGCGATTACCGCAGTTTCTGGTGGAGTATTCTGGCGTCTAATGATTGGTACAGTTGTAATGCTAGCAGCTGGCTATATGGGCGAAGCTGGATACATCAATACAATGTTAGGTTTCGTGGTAGGTATGGTCGGTTGGGCATACATCCTTTATGAGATTTTCCTTGGTGAAGCTGGAAAAGTTGCGGCGGAAAAAGCCCCGGCATCGGTACAATCTGCATTCTCAACAATGCGTTGGATCGTAACAATT LITVPLLMVEFYLILRAITAVSGGVFWRLMIGTVVMLAAGYMGEAGYINTMLGFVVGMVGWAYILYEIFLGEAGKVAAEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTGCCACTCTTGATGGTTGAGTTCTACTTAATTCTGCGCGCG---------ATT---ACCGCAGTTTCTGGT---GGAGTA------------------------------------TTCTGGCGT---CTAATGATTGGTACAGTTGTAATGCTAGCAGCTGGCTATATGGGCGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATACA------------------ATGTTAGGT---TTCGTGGTAGGTATGGTCGGTTGGGCATACATCCTTTATGAGATT---------------TTC------CTT---GGTGAAGCTGGAAAAGTTGCGGCGGAA------AAA---GCCCCGGCATCGGTA---CAA---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATCGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTVVMLAAGYMGE---A------G--Y-----------I----------------------NT------MLG-FVVGMVGWAYILYEI-----F--L-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-b]_KJ927144 [III-Alpha4-b] PRGD_OTU005c_3aabb40f54e7d38e09eea5bb499fb9e3 gb|KJ927144| PRGD_OTU005c_3aabb40f54e7d38e09eea5bb499fb9e3, putative proteorhodopsin gene, partial cds. PRGD_OTU005c_3aabb40f54e7d38e09eea5bb499fb9e3, putative proteorhodopsin gene, partial cds. KJ927144 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATTACCGTGCCGCTCTTGATGGTTGAGTTCTACTTAATTCTTCGTGCGATCACCGCAGTTTCTGGTGGAGTATTCTGGCGTCTAATGATTGGTACAGTTGTAATGTTAGCAGCTGGCTACATGGGCGAAGCTGGATACATCAACGCAATGTTAGGTTTCATAGTAGGTATAGTCGGTTGGGCATACATCCTTTATGAGATTTTCTTTGGTGAAGCTGGAAAAGTTGCGGCAGAAAAAGCCCCGGCATCGGTACAGTCTGCATTTTCAACAATGCGTTGGATCGTTACAATT LITVPLLMVEFYLILRAITAVSGGVFWRLMIGTVVMLAAGYMGEAGYINAMLGFIVGIVGWAYILYEIFFGEAGKVAAEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACCGTGCCGCTCTTGATGGTTGAGTTCTACTTAATTCTTCGTGCG---------ATC---ACCGCAGTTTCTGGT---GGAGTA------------------------------------TTCTGGCGT---CTAATGATTGGTACAGTTGTAATGTTAGCAGCTGGCTACATGGGCGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGCA------------------ATGTTAGGT---TTCATAGTAGGTATAGTCGGTTGGGCATACATCCTTTATGAGATT---------------TTC------TTT---GGTGAAGCTGGAAAAGTTGCGGCAGAA------AAA---GCCCCGGCATCGGTA---CAG---TCT---GCA---TTT---TCA---ACAATG---CGTTGGATCGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGTVVMLAAGYMGE---A------G--Y-----------I----------------------NA------MLG-FIVGIVGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-b]_KJ927150 [III-Alpha4-b] PRGD_OTU005c_f82fa5fa98c8b0056ee5ad3975ca2412 gb|KJ927150| PRGD_OTU005c_f82fa5fa98c8b0056ee5ad3975ca2412, putative proteorhodopsin gene, partial cds. PRGD_OTU005c_f82fa5fa98c8b0056ee5ad3975ca2412, putative proteorhodopsin gene, partial cds. KJ927150 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175) TTAATCACAGTGCCACTGTTGATGGTGGAGTTCTATCTTATACTTCGCGCTATCACAGCAGTATCTGGCGGCGTGTTCTGGCGTCTGATGGTCGGCACATTAGTAATGCTGGCAGCGGGCTATATGGGCGAAGCAGGCTATATCAATCCGATGTTAGGTTTTGTTGTCGGTATAGTTGGATGGGCATATATTTTATATGAGATCTTCTTTGGTGAAGCCGGACAGGTCGCATCGGAAAAAGCTCCAGCTTCTGTACAGTCAGCCTTTTCAACTATGCGTTGGATTGTGACAATT LITVPLLMVEFYLILRAITAVSGGVFWRLMVGTLVMLAAGYMGEAGYINPMLGFVVGIVGWAYILYEIFFGEAGQVASEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTGCCACTGTTGATGGTGGAGTTCTATCTTATACTTCGCGCT---------ATC---ACAGCAGTATCTGGC---GGCGTG------------------------------------TTCTGGCGT---CTGATGGTCGGCACATTAGTAATGCTGGCAGCGGGCTATATGGGCGAA---------GCA------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AATCCG------------------ATGTTAGGT---TTTGTTGTCGGTATAGTTGGATGGGCATATATTTTATATGAGATC---------------TTC------TTT---GGTGAAGCCGGACAGGTCGCATCGGAA------AAA---GCTCCAGCTTCTGTA---CAG---TCA---GCC---TTT---TCA---ACTATG---CGTTGGATTGTGACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMVGTLVMLAAGYMGE---A------G--Y-----------I----------------------NP------MLG-FVVGIVGWAYILYEI-----F--F-GEAGQVASE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-b]_KJ927146 [III-Alpha4-b] PRGD_OTU005c_6413d99f732e0526e5811dfee3f7e0eb gb|KJ927146| PRGD_OTU005c_6413d99f732e0526e5811dfee3f7e0eb, putative proteorhodopsin gene, partial cds. PRGD_OTU005c_6413d99f732e0526e5811dfee3f7e0eb, putative proteorhodopsin gene, partial cds. KJ927146 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-33.28, 45.35) TTAATCACAGTGCCACTGTTGATGGTGGAGTTCTATCTTATACTACGCGCTATCACAGCAGTATCTGGCGGCGTGTTCTGGCGTCTGATGGTCGGCACAGTGGTAATGCTGGCAGCGGGCTATATGGGCGAAGCAGGCTATATCAATCCGATGTTAGGTTTTGTTGTCGGTATAGTTGGATGGGCTTATATTTTATATGAGATCTTCTTTGGTGAAGCCGGGCAGGTCGCATCGGAAAAAGCTCCAGCTTCTGTACAGTCAGCCTTTTCAACTATGCGTTGGATTGTGACAATT LITVPLLMVEFYLILRAITAVSGGVFWRLMVGTVVMLAAGYMGEAGYINPMLGFVVGIVGWAYILYEIFFGEAGQVASEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTGCCACTGTTGATGGTGGAGTTCTATCTTATACTACGCGCT---------ATC---ACAGCAGTATCTGGC---GGCGTG------------------------------------TTCTGGCGT---CTGATGGTCGGCACAGTGGTAATGCTGGCAGCGGGCTATATGGGCGAA---------GCA------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AATCCG------------------ATGTTAGGT---TTTGTTGTCGGTATAGTTGGATGGGCTTATATTTTATATGAGATC---------------TTC------TTT---GGTGAAGCCGGGCAGGTCGCATCGGAA------AAA---GCTCCAGCTTCTGTA---CAG---TCA---GCC---TTT---TCA---ACTATG---CGTTGGATTGTGACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMVGTVVMLAAGYMGE---A------G--Y-----------I----------------------NP------MLG-FVVGIVGWAYILYEI-----F--F-GEAGQVASE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-b]_KJ927145 [III-Alpha4-b] PRGD_OTU005c_43c5fe3e9b55d76ff34796b45daa7748 gb|KJ927145| PRGD_OTU005c_43c5fe3e9b55d76ff34796b45daa7748, putative proteorhodopsin gene, partial cds. PRGD_OTU005c_43c5fe3e9b55d76ff34796b45daa7748, putative proteorhodopsin gene, partial cds. KJ927145 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTGCCATTATTGATGGTGGAGTTCTATCTCATACTTCGCGCTATCACAGCGGTGTCTGGCGGCGTATTCTGGCGTCTGATGGTCGGCACACTTGTAATGCTGGCAGCGGGCTACATGGGCGAAGCAGGCTACATTAATCCGATGTTAGGTTTTGTTGTCGGTATAGTCGGATGGGCTTATATTTTATATGAGATCTTCTTTGGCGAAGCCGGGCAGGTCGCATCGGAAAAAGCTCCAGCCTCTGTACAGTCAGCCTTTTCAACCATGCGTTGGATTGTGACAATT LITVPLLMVEFYLILRAITAVSGGVFWRLMVGTLVMLAAGYMGEAGYINPMLGFVVGIVGWAYILYEIFFGEAGQVASEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTATTGATGGTGGAGTTCTATCTCATACTTCGCGCT---------ATC---ACAGCGGTGTCTGGC---GGCGTA------------------------------------TTCTGGCGT---CTGATGGTCGGCACACTTGTAATGCTGGCAGCGGGCTACATGGGCGAA---------GCA------------------GGC------TAC---------------------------------ATT------------------------------------------------------------------AATCCG------------------ATGTTAGGT---TTTGTTGTCGGTATAGTCGGATGGGCTTATATTTTATATGAGATC---------------TTC------TTT---GGCGAAGCCGGGCAGGTCGCATCGGAA------AAA---GCTCCAGCCTCTGTA---CAG---TCA---GCC---TTT---TCA---ACCATG---CGTTGGATTGTGACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMVGTLVMLAAGYMGE---A------G--Y-----------I----------------------NP------MLG-FVVGIVGWAYILYEI-----F--F-GEAGQVASE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-b]_KJ927147 [III-Alpha4-b] PRGD_OTU005c_88e8ec684a369b73129284cbb6a15427 gb|KJ927147| PRGD_OTU005c_88e8ec684a369b73129284cbb6a15427, putative proteorhodopsin gene, partial cds. PRGD_OTU005c_88e8ec684a369b73129284cbb6a15427, putative proteorhodopsin gene, partial cds. KJ927147 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683) CTAATCACAGTGCCACTCTTGATGGTAGAGTTTTACCTAATTCTACGTGCGATTACGGCAGTATCTGGCGGCGTGTTCTGGCGTTTGATGATTGGTTCAATTGTCATGCTGGCAGCTGGTTACATGGGCGAAGCTGGAATAATTAGTCCAATACTAGGTTTCGTAGTAGGTATTGTCGGTTGGGCATATATCTTATATGAGATCTTCTATGGTGAGGCTGGGAAAGTCGCTGCTGAGAAGGCTCCAGCATCGGTACAGTCAGCATTTTCAACAATGCGTTGGATCGTAACAATC LITVPLLMVEFYLILRAITAVSGGVFWRLMIGSIVMLAAGYMGEAGIISPILGFVVGIVGWAYILYEIFYGEAGKVAAEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACAGTGCCACTCTTGATGGTAGAGTTTTACCTAATTCTACGTGCG---------ATT---ACGGCAGTATCTGGC---GGCGTG------------------------------------TTCTGGCGT---TTGATGATTGGTTCAATTGTCATGCTGGCAGCTGGTTACATGGGCGAA---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------AGTCCA------------------ATACTAGGT---TTCGTAGTAGGTATTGTCGGTTGGGCATATATCTTATATGAGATC---------------TTC------TAT---GGTGAGGCTGGGAAAGTCGCTGCTGAG------AAG---GCTCCAGCATCGGTA---CAG---TCA---GCA---TTT---TCA---ACAATG---CGTTGGATCGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GV------------FWR-LMIGSIVMLAAGYMGE---A------G--I-----------I----------------------SP------ILG-FVVGIVGWAYILYEI-----F--Y-GEAGKVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC10A01]_KJ927152 [III-Alpha4-ARCTIC10A01] PRGD_OTU005d_02556595d252f0cda82eeac5a66295f4 gb|KJ927152| PRGD_OTU005d_02556595d252f0cda82eeac5a66295f4, putative proteorhodopsin gene, partial cds. PRGD_OTU005d_02556595d252f0cda82eeac5a66295f4, putative proteorhodopsin gene, partial cds. KJ927152 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC10A01-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC10A01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781) CTAATCACGGTTCCACTCTTGATGGTAGAATTTTACCTCATCTTGCGGGCAATCACAAATGTTTCTGGCGGAATTTTCTGGCGCTTGATGATCGGTACGATGGTAATGTTGGTCGGCGGCTACATGGGTGAAGCTGGTTACATAAATGCAGTGTTGGGATTTATCGTCGGTATGGCCGGCTGGGCATACATCCTATATGAAATTTTCTTTGGTGAAGCAGGGAAAGTTGCAGCTGAAAAAGCTCCTCCATCAGTGCAATCTGCATTCGTAACAATGCGTTGGATCGTGACCATC LITVPLLMVEFYLILRAITNVSGGIFWRLMIGTMVMLVGGYMGEAGYINAVLGFIVGMAGWAYILYEIFFGEAGKVAAEKAPPSVQSAFVTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACGGTTCCACTCTTGATGGTAGAATTTTACCTCATCTTGCGGGCA---------ATC---ACAAATGTTTCTGGC---GGAATT------------------------------------TTCTGGCGC---TTGATGATCGGTACGATGGTAATGTTGGTCGGCGGCTACATGGGTGAA---------GCT------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGCA------------------GTGTTGGGA---TTTATCGTCGGTATGGCCGGCTGGGCATACATCCTATATGAAATT---------------TTC------TTT---GGTGAAGCAGGGAAAGTTGCAGCTGAA------AAA---GCTCCTCCATCAGTG---CAA---TCT---GCA---TTC---GTA---ACAATG---CGTTGGATCGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGTMVMLVGGYMGE---A------G--Y-----------I----------------------NA------VLG-FIVGMAGWAYILYEI-----F--F-GEAGKVAAE--K-APPSV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC10A01]_KJ927165 [III-Alpha4-ARCTIC10A01] PRGD_OTU005d_df112c19b10414e23440fab25bb91539 gb|KJ927165| PRGD_OTU005d_df112c19b10414e23440fab25bb91539, putative proteorhodopsin gene, partial cds. PRGD_OTU005d_df112c19b10414e23440fab25bb91539, putative proteorhodopsin gene, partial cds. KJ927165 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC10A01-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC10A01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833) CTAATCACGGTTCCACTCTTGATGGTAGAATTTTACCTTATTTTGCGGGCAATCACAAATGTTTCTGGCGGAATTTTCTGGCGCTTGATGATCGGTACGATGGTAATGTTGGTCGGCGGCTACATGGGCGAAGCTGGTTACATAAATGCAATGTTGGGATTTATCGTCGGTATGGCCGGCTGGGCATACATTCTATATGAAATTTTCTTTGGTGAAGCAGGGAAAGTTGCAGCTGAAAAAGCTCCTCCATCAGTGCAATCTGCATTCGTAACAATGCGTTGGATCGTGACCATC LITVPLLMVEFYLILRAITNVSGGIFWRLMIGTMVMLVGGYMGEAGYINAMLGFIVGMAGWAYILYEIFFGEAGKVAAEKAPPSVQSAFVTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACGGTTCCACTCTTGATGGTAGAATTTTACCTTATTTTGCGGGCA---------ATC---ACAAATGTTTCTGGC---GGAATT------------------------------------TTCTGGCGC---TTGATGATCGGTACGATGGTAATGTTGGTCGGCGGCTACATGGGCGAA---------GCT------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGCA------------------ATGTTGGGA---TTTATCGTCGGTATGGCCGGCTGGGCATACATTCTATATGAAATT---------------TTC------TTT---GGTGAAGCAGGGAAAGTTGCAGCTGAA------AAA---GCTCCTCCATCAGTG---CAA---TCT---GCA---TTC---GTA---ACAATG---CGTTGGATCGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGTMVMLVGGYMGE---A------G--Y-----------I----------------------NA------MLG-FIVGMAGWAYILYEI-----F--F-GEAGKVAAE--K-APPSV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC10A01]_KJ927157 [III-Alpha4-ARCTIC10A01] PRGD_OTU005d_6447e4341da228c1e671439667dddfbb gb|KJ927157| PRGD_OTU005d_6447e4341da228c1e671439667dddfbb, putative proteorhodopsin gene, partial cds. PRGD_OTU005d_6447e4341da228c1e671439667dddfbb, putative proteorhodopsin gene, partial cds. KJ927157 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC10A01-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC10A01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (69.5142, -133.4185) CTAATCACGGTTCCACTCTTGATGGTAGAATTTTACCTTATCTTGCGGGCAATCACAAATGTTTCTGGTGGAATTTTCTGGCGCTTGATGATCGGTACGATGGTAATGTTGGTCGGCGGCTACATGGGCGAAGCTGGTTACATAAATGCAATGTTGGGATTTATCGTCGGTATGGCCGGCTGGGCATACATCCTATATGAAATTTTCTTTGGTGAAGCAGGGAAAGTTGCAGCTGAAAAAGCTCCTCCATCAGTGCAATCCGCTTTTGTAACAATGCGTTGGATCGTGAGCATC LITVPLLMVEFYLILRAITNVSGGIFWRLMIGTMVMLVGGYMGEAGYINAMLGFIVGMAGWAYILYEIFFGEAGKVAAEKAPPSVQSAFVTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACGGTTCCACTCTTGATGGTAGAATTTTACCTTATCTTGCGGGCA---------ATC---ACAAATGTTTCTGGT---GGAATT------------------------------------TTCTGGCGC---TTGATGATCGGTACGATGGTAATGTTGGTCGGCGGCTACATGGGCGAA---------GCT------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGCA------------------ATGTTGGGA---TTTATCGTCGGTATGGCCGGCTGGGCATACATCCTATATGAAATT---------------TTC------TTT---GGTGAAGCAGGGAAAGTTGCAGCTGAA------AAA---GCTCCTCCATCAGTG---CAA---TCC---GCT---TTT---GTA---ACAATG---CGTTGGATCGTGAGCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGTMVMLVGGYMGE---A------G--Y-----------I----------------------NA------MLG-FIVGMAGWAYILYEI-----F--F-GEAGKVAAE--K-APPSV-Q-S-A-F-V-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC10A01]_KJ927168 [III-Alpha4-ARCTIC10A01] PRGD_OTU005d_f684e3c41ea8427b2906ce3e59092bcb gb|KJ927168| PRGD_OTU005d_f684e3c41ea8427b2906ce3e59092bcb, putative proteorhodopsin gene, partial cds. PRGD_OTU005d_f684e3c41ea8427b2906ce3e59092bcb, putative proteorhodopsin gene, partial cds. KJ927168 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC10A01-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC10A01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (67.49, -168.12) CTAATCACGGTTCCACTCTTGATGGTAGAATTTTACCTTATCTTGCGGGCAATCACAAATGTTTCGGGTGGAATTTTCTGGCGCTTGATGATCGGTACGATGGTAATGTTGGTCGGCGGCTACATGGGCGAAGCTGGTTATATAAATGCAATGTTGGGATTTATCGTCGGTATGGCCGGCTGGGCATACATCCTGTATGAAATTTTCTTTGGTGAAGCAGGGAAAGTTGCAGCTGAAAAAGCTCCTCCATCAGTGCAATCTGCTTTCGTAACAATGCGTTGGATCGTGACCATC LITVPLLMVEFYLILRAITNVSGGIFWRLMIGTMVMLVGGYMGEAGYINAMLGFIVGMAGWAYILYEIFFGEAGKVAAEKAPPSVQSAFVTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACGGTTCCACTCTTGATGGTAGAATTTTACCTTATCTTGCGGGCA---------ATC---ACAAATGTTTCGGGT---GGAATT------------------------------------TTCTGGCGC---TTGATGATCGGTACGATGGTAATGTTGGTCGGCGGCTACATGGGCGAA---------GCT------------------GGT------TAT---------------------------------ATA------------------------------------------------------------------AATGCA------------------ATGTTGGGA---TTTATCGTCGGTATGGCCGGCTGGGCATACATCCTGTATGAAATT---------------TTC------TTT---GGTGAAGCAGGGAAAGTTGCAGCTGAA------AAA---GCTCCTCCATCAGTG---CAA---TCT---GCT---TTC---GTA---ACAATG---CGTTGGATCGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGTMVMLVGGYMGE---A------G--Y-----------I----------------------NA------MLG-FIVGMAGWAYILYEI-----F--F-GEAGKVAAE--K-APPSV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC10A01]_KJ927164 [III-Alpha4-ARCTIC10A01] PRGD_OTU005d_d9230e8e309d2448af52917fd6e046ff gb|KJ927164| PRGD_OTU005d_d9230e8e309d2448af52917fd6e046ff, putative proteorhodopsin gene, partial cds. PRGD_OTU005d_d9230e8e309d2448af52917fd6e046ff, putative proteorhodopsin gene, partial cds. KJ927164 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC10A01-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC10A01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTAATCACGGTTCCACTCTTGATGGTAGAATTTTACCTTATCTTGCGTGCAATCACAAATGTTTCTGGTGGAATTTTCTGGCGCTTGATGATCGGTACGATGGTAATGTTGGTCGGCGGCTACATGGGCGAAGCTGGTTACATAAATGCAATGTTGGGATTTATCGTCGGTATGGCCGGCTGGGCATACATCCTATATGAAATTTTCTTTGGTGAAGCAGGGAAAGTTGCAGCTGAAAAAGCTCCTCCATCGGTGCAATCTGCTTTCGTAACAATGCGTTGGATCGTGACCATC LITVPLLMVEFYLILRAITNVSGGIFWRLMIGTMVMLVGGYMGEAGYINAMLGFIVGMAGWAYILYEIFFGEAGKVAAEKAPPSVQSAFVTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACGGTTCCACTCTTGATGGTAGAATTTTACCTTATCTTGCGTGCA---------ATC---ACAAATGTTTCTGGT---GGAATT------------------------------------TTCTGGCGC---TTGATGATCGGTACGATGGTAATGTTGGTCGGCGGCTACATGGGCGAA---------GCT------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGCA------------------ATGTTGGGA---TTTATCGTCGGTATGGCCGGCTGGGCATACATCCTATATGAAATT---------------TTC------TTT---GGTGAAGCAGGGAAAGTTGCAGCTGAA------AAA---GCTCCTCCATCGGTG---CAA---TCT---GCT---TTC---GTA---ACAATG---CGTTGGATCGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGTMVMLVGGYMGE---A------G--Y-----------I----------------------NA------MLG-FIVGMAGWAYILYEI-----F--F-GEAGKVAAE--K-APPSV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC10A01]_KJ927163 [III-Alpha4-ARCTIC10A01] PRGD_OTU005d_c374d2fa120dcd08ff864789b60eeb5c gb|KJ927163| PRGD_OTU005d_c374d2fa120dcd08ff864789b60eeb5c, putative proteorhodopsin gene, partial cds. PRGD_OTU005d_c374d2fa120dcd08ff864789b60eeb5c, putative proteorhodopsin gene, partial cds. KJ927163 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC10A01-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC10A01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (67.49, -168.12) CTAATCACGGTTCCACTCTTGATGGTAGAATTTTACCTTATCCTGCGTGCAATCACAAATGTTTCTGGCGGAATTTTCTGGCGCTTGATGATCGGTACGATGGTAATGTTGGTCGGCGGCTATATGGGCGAAGCTGGTTACATAAATGCAATGTTGGGATTTATTATCGGTATGGCCGGCTGGGCATACATCCTATATGAAATTTTCTTTGGTGAAGCAGGGAAAGTTGCAGCTGAAAAAGCTCCTCCATCGGTGCAATCTGCTTTCGTAACAATGCGTTGGATCGTGACCATC LITVPLLMVEFYLILRAITNVSGGIFWRLMIGTMVMLVGGYMGEAGYINAMLGFIIGMAGWAYILYEIFFGEAGKVAAEKAPPSVQSAFVTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACGGTTCCACTCTTGATGGTAGAATTTTACCTTATCCTGCGTGCA---------ATC---ACAAATGTTTCTGGC---GGAATT------------------------------------TTCTGGCGC---TTGATGATCGGTACGATGGTAATGTTGGTCGGCGGCTATATGGGCGAA---------GCT------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGCA------------------ATGTTGGGA---TTTATTATCGGTATGGCCGGCTGGGCATACATCCTATATGAAATT---------------TTC------TTT---GGTGAAGCAGGGAAAGTTGCAGCTGAA------AAA---GCTCCTCCATCGGTG---CAA---TCT---GCT---TTC---GTA---ACAATG---CGTTGGATCGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGTMVMLVGGYMGE---A------G--Y-----------I----------------------NA------MLG-FIIGMAGWAYILYEI-----F--F-GEAGKVAAE--K-APPSV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC10A01]_KJ927159 [III-Alpha4-ARCTIC10A01] PRGD_OTU005d_7d080ed990a75b5b508edc393ed2cb2e gb|KJ927159| PRGD_OTU005d_7d080ed990a75b5b508edc393ed2cb2e, putative proteorhodopsin gene, partial cds. PRGD_OTU005d_7d080ed990a75b5b508edc393ed2cb2e, putative proteorhodopsin gene, partial cds. KJ927159 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC10A01-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC10A01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (67.49, -168.12) CTAATCACGGTTCCACTCTTGATGATAGAATTTTACCTTATCTTGCGGGCAATCACAAATGTTTCTGGCGGAATTTTCTGGCGCTTGATGATCGGTACGATGGTAATGTTGGTCGGCGGCTACATGGGCGAGGCTGGTTACATAAATGCAATGTTGGGATTTATCGTCGGTATGGTCGGCTGGGCATACATCCTATATGAAATTTTCTTTGGTGAAGCAGGGAAAGTTGCAGCTGAAAAAGCTCCTCCATCGGTGCAATCTGCTTTCGTAACAATGCGTTGGATCGTGACCATC LITVPLLMIEFYLILRAITNVSGGIFWRLMIGTMVMLVGGYMGEAGYINAMLGFIVGMVGWAYILYEIFFGEAGKVAAEKAPPSVQSAFVTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACGGTTCCACTCTTGATGATAGAATTTTACCTTATCTTGCGGGCA---------ATC---ACAAATGTTTCTGGC---GGAATT------------------------------------TTCTGGCGC---TTGATGATCGGTACGATGGTAATGTTGGTCGGCGGCTACATGGGCGAG---------GCT------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGCA------------------ATGTTGGGA---TTTATCGTCGGTATGGTCGGCTGGGCATACATCCTATATGAAATT---------------TTC------TTT---GGTGAAGCAGGGAAAGTTGCAGCTGAA------AAA---GCTCCTCCATCGGTG---CAA---TCT---GCT---TTC---GTA---ACAATG---CGTTGGATCGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GI------------FWR-LMIGTMVMLVGGYMGE---A------G--Y-----------I----------------------NA------MLG-FIVGMVGWAYILYEI-----F--F-GEAGKVAAE--K-APPSV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC10A01]_KJ927162 [III-Alpha4-ARCTIC10A01] PRGD_OTU005d_b9205eb53315039c60ed2dd4cee99708 gb|KJ927162| PRGD_OTU005d_b9205eb53315039c60ed2dd4cee99708, putative proteorhodopsin gene, partial cds. PRGD_OTU005d_b9205eb53315039c60ed2dd4cee99708, putative proteorhodopsin gene, partial cds. KJ927162 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC10A01-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC10A01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683) CTAATCACGGTTCCACTCTTGATGGTTGAATTTTACCTTATCTTGCGTGCAATCACAAATGTTTCTGGCGGAATTTTCTGGCGCTTGATGATCGGTACGATGGTAATGTTGGTCGGCGGCTATCTGGGCGAAGCTGGTTACATAAATGCAATGTTGGGATTTATCGTCGGTATGGTCGGCTGGGCCTACATCCTATATGAAATCTTCTTTGGTGAAGCAGGGAAAGTTGCAGCTGAGAAAGCTCCTCCATCGGTGCAATCTGCTTTTGTAACAATGCGTTGGATCGTGACCATC LITVPLLMVEFYLILRAITNVSGGIFWRLMIGTMVMLVGGYLGEAGYINAMLGFIVGMVGWAYILYEIFFGEAGKVAAEKAPPSVQSAFVTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACGGTTCCACTCTTGATGGTTGAATTTTACCTTATCTTGCGTGCA---------ATC---ACAAATGTTTCTGGC---GGAATT------------------------------------TTCTGGCGC---TTGATGATCGGTACGATGGTAATGTTGGTCGGCGGCTATCTGGGCGAA---------GCT------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGCA------------------ATGTTGGGA---TTTATCGTCGGTATGGTCGGCTGGGCCTACATCCTATATGAAATC---------------TTC------TTT---GGTGAAGCAGGGAAAGTTGCAGCTGAG------AAA---GCTCCTCCATCGGTG---CAA---TCT---GCT---TTT---GTA---ACAATG---CGTTGGATCGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGTMVMLVGGYLGE---A------G--Y-----------I----------------------NA------MLG-FIVGMVGWAYILYEI-----F--F-GEAGKVAAE--K-APPSV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC10A01]_KJ927154 [III-Alpha4-ARCTIC10A01] PRGD_OTU005d_3abe17d0d4e34f9714b69fc6f5892c41 gb|KJ927154| PRGD_OTU005d_3abe17d0d4e34f9714b69fc6f5892c41, putative proteorhodopsin gene, partial cds. PRGD_OTU005d_3abe17d0d4e34f9714b69fc6f5892c41, putative proteorhodopsin gene, partial cds. KJ927154 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC10A01-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC10A01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683) CTGATCACGGTTCCACTCTTGATGGTGGAATTTTACCTTATCTTGCGTGCAATCACAAATGTTTCTGGCGGAATTTTCTGGCGCTTGATGATCGGTACGATGGTAATGTTGGTCGGCGGCTATATGGGCGAAGCTGGTTACATAAATGCAATGTTGGGATTTATCGTGGGTATGGTCGGCTGGGCCTACATCCTATATGAAATCTTCTTTGGTGAAGCAGGGAAAGTTGCAGCTGAAAAAGCTCCTCCATCGGTGCAATCTGCTTTTGTAACAATGCGTTGGATCGTGACCATC LITVPLLMVEFYLILRAITNVSGGIFWRLMIGTMVMLVGGYMGEAGYINAMLGFIVGMVGWAYILYEIFFGEAGKVAAEKAPPSVQSAFVTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACGGTTCCACTCTTGATGGTGGAATTTTACCTTATCTTGCGTGCA---------ATC---ACAAATGTTTCTGGC---GGAATT------------------------------------TTCTGGCGC---TTGATGATCGGTACGATGGTAATGTTGGTCGGCGGCTATATGGGCGAA---------GCT------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGCA------------------ATGTTGGGA---TTTATCGTGGGTATGGTCGGCTGGGCCTACATCCTATATGAAATC---------------TTC------TTT---GGTGAAGCAGGGAAAGTTGCAGCTGAA------AAA---GCTCCTCCATCGGTG---CAA---TCT---GCT---TTT---GTA---ACAATG---CGTTGGATCGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGTMVMLVGGYMGE---A------G--Y-----------I----------------------NA------MLG-FIVGMVGWAYILYEI-----F--F-GEAGKVAAE--K-APPSV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC10A01]_KJ927158 [III-Alpha4-ARCTIC10A01] PRGD_OTU005d_6e7a4bd8de332bd885f7fed674337a9a gb|KJ927158| PRGD_OTU005d_6e7a4bd8de332bd885f7fed674337a9a, putative proteorhodopsin gene, partial cds. PRGD_OTU005d_6e7a4bd8de332bd885f7fed674337a9a, putative proteorhodopsin gene, partial cds. KJ927158 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC10A01-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC10A01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; ; 67.49, -168.12) CTGATCACGGTTCCACTCTTGATGGTGGAATTTTACCTTATCTTGCGTGCAATCACAAATGTTTCTGGCGGAATTTTCTGGCGCTTGATGATCGGTACGATGGTAATGTTGGTCGGCGGCTATATGGGCGAAGCTGGTTACATAAATGCAATGTTGGGATTTATCGTGGGTATGGTCGGCTGGGCCTACATCCTATATGAAATCTTCTTTGGTGAAGCAGGGAAAGTTGCAGCTGAAAAAGCTCCTCCATCGGTGCAATCTGCTTTCGTAACGATGCGTTGGATCGTGACCATC LITVPLLMVEFYLILRAITNVSGGIFWRLMIGTMVMLVGGYMGEAGYINAMLGFIVGMVGWAYILYEIFFGEAGKVAAEKAPPSVQSAFVTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACGGTTCCACTCTTGATGGTGGAATTTTACCTTATCTTGCGTGCA---------ATC---ACAAATGTTTCTGGC---GGAATT------------------------------------TTCTGGCGC---TTGATGATCGGTACGATGGTAATGTTGGTCGGCGGCTATATGGGCGAA---------GCT------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGCA------------------ATGTTGGGA---TTTATCGTGGGTATGGTCGGCTGGGCCTACATCCTATATGAAATC---------------TTC------TTT---GGTGAAGCAGGGAAAGTTGCAGCTGAA------AAA---GCTCCTCCATCGGTG---CAA---TCT---GCT---TTC---GTA---ACGATG---CGTTGGATCGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGTMVMLVGGYMGE---A------G--Y-----------I----------------------NA------MLG-FIVGMVGWAYILYEI-----F--F-GEAGKVAAE--K-APPSV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC10A01]_KJ927155 [III-Alpha4-ARCTIC10A01] PRGD_OTU005d_52053bfdcf4b9dadc4ebb198543049c3 gb|KJ927155| PRGD_OTU005d_52053bfdcf4b9dadc4ebb198543049c3, putative proteorhodopsin gene, partial cds. PRGD_OTU005d_52053bfdcf4b9dadc4ebb198543049c3, putative proteorhodopsin gene, partial cds. KJ927155 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC10A01-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC10A01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTGATCACGGTTCCACTCTTGATGGTAGAATTTTATCTCATATTGCGTGCAATCACAAATGTTTCTGGCGGAATTTTCTGGCGCTTGATGATCGGTACGATGGTAATGTTGGTCGGCGGCTACATGGGCGAAGCTGGTTACATAAATGCAATGTTGGGATTTATCGTCGGTATGGTCGGCTGGGCCTACATCCTATATGAAATCTTCTTTGGTGAAGCAGGGAAAGTTGCAGCTGAAAAAGCTCCTCCATCGGTGCAATCTGCTTTCGTAACGATGCGTTGGATCGTGACCATC LITVPLLMVEFYLILRAITNVSGGIFWRLMIGTMVMLVGGYMGEAGYINAMLGFIVGMVGWAYILYEIFFGEAGKVAAEKAPPSVQSAFVTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACGGTTCCACTCTTGATGGTAGAATTTTATCTCATATTGCGTGCA---------ATC---ACAAATGTTTCTGGC---GGAATT------------------------------------TTCTGGCGC---TTGATGATCGGTACGATGGTAATGTTGGTCGGCGGCTACATGGGCGAA---------GCT------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGCA------------------ATGTTGGGA---TTTATCGTCGGTATGGTCGGCTGGGCCTACATCCTATATGAAATC---------------TTC------TTT---GGTGAAGCAGGGAAAGTTGCAGCTGAA------AAA---GCTCCTCCATCGGTG---CAA---TCT---GCT---TTC---GTA---ACGATG---CGTTGGATCGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGTMVMLVGGYMGE---A------G--Y-----------I----------------------NA------MLG-FIVGMVGWAYILYEI-----F--F-GEAGKVAAE--K-APPSV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC10A01]_KJ927160 [III-Alpha4-ARCTIC10A01] PRGD_OTU005d_ac0bd6359212e294c52295202bbf59fb gb|KJ927160| PRGD_OTU005d_ac0bd6359212e294c52295202bbf59fb, putative proteorhodopsin gene, partial cds. PRGD_OTU005d_ac0bd6359212e294c52295202bbf59fb, putative proteorhodopsin gene, partial cds. KJ927160 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC10A01-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC10A01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683) CTGATCACGGTTCCACTCTTGATGGTAGAATTTTATCTTATCTTGCGTGCAATCACAAATGTTTCTGGCGGAATTTTCTGGCGCTTGATGATTGGTACGATGGTAATGTTGGTCGGCGGCTATCTGGGCGAAGCAGGTTACATAAATGCAATGTTTGGATTTATCGTCGGTATGGTTGGCTGGGCCTACATCCTATATGAAATCTTCTTCGGAGAAGCAGGGAAAGTTGCGGCTGAAAAAGCTCCACCATCGGTGCAATCTGCTTTCGTAACAATGCGTTGGATCGTGACCATC LITVPLLMVEFYLILRAITNVSGGIFWRLMIGTMVMLVGGYLGEAGYINAMFGFIVGMVGWAYILYEIFFGEAGKVAAEKAPPSVQSAFVTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACGGTTCCACTCTTGATGGTAGAATTTTATCTTATCTTGCGTGCA---------ATC---ACAAATGTTTCTGGC---GGAATT------------------------------------TTCTGGCGC---TTGATGATTGGTACGATGGTAATGTTGGTCGGCGGCTATCTGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGCA------------------ATGTTTGGA---TTTATCGTCGGTATGGTTGGCTGGGCCTACATCCTATATGAAATC---------------TTC------TTC---GGAGAAGCAGGGAAAGTTGCGGCTGAA------AAA---GCTCCACCATCGGTG---CAA---TCT---GCT---TTC---GTA---ACAATG---CGTTGGATCGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGTMVMLVGGYLGE---A------G--Y-----------I----------------------NA------MFG-FIVGMVGWAYILYEI-----F--F-GEAGKVAAE--K-APPSV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC10A01]_KJ927167 [III-Alpha4-ARCTIC10A01] PRGD_OTU005d_e7bc94f30f817de0ba56de83dc7aaf2a gb|KJ927167| PRGD_OTU005d_e7bc94f30f817de0ba56de83dc7aaf2a, putative proteorhodopsin gene, partial cds. PRGD_OTU005d_e7bc94f30f817de0ba56de83dc7aaf2a, putative proteorhodopsin gene, partial cds. KJ927167 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC10A01-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC10A01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -33.28, 45.35) CTGATCACGGTGCCACTCTTGATGGTAGAATTTTATCTTATCTTGCGTGCAATCACAAATGTTTCTGGCGGAATTTTCTGGCGCTTGATGATTGGTACGATGGTAATGTTGGTTGGCGGCTATATGGGCGAAGCAGGTTACATAAATGCAATGTTTGGATTTATCGTCGGTATGGTTGGCTGGGCGTACATCCTATATGAAATCTTCTTTGGAGAAGCAGGGAAAGTTGCGGCTGAAAAAGCTCCACCATCGGTGCAATCTGCTTTCGTAACAATGCGTTGGATCGTGACCATC LITVPLLMVEFYLILRAITNVSGGIFWRLMIGTMVMLVGGYMGEAGYINAMFGFIVGMVGWAYILYEIFFGEAGKVAAEKAPPSVQSAFVTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACGGTGCCACTCTTGATGGTAGAATTTTATCTTATCTTGCGTGCA---------ATC---ACAAATGTTTCTGGC---GGAATT------------------------------------TTCTGGCGC---TTGATGATTGGTACGATGGTAATGTTGGTTGGCGGCTATATGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGCA------------------ATGTTTGGA---TTTATCGTCGGTATGGTTGGCTGGGCGTACATCCTATATGAAATC---------------TTC------TTT---GGAGAAGCAGGGAAAGTTGCGGCTGAA------AAA---GCTCCACCATCGGTG---CAA---TCT---GCT---TTC---GTA---ACAATG---CGTTGGATCGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGTMVMLVGGYMGE---A------G--Y-----------I----------------------NA------MFG-FIVGMVGWAYILYEI-----F--F-GEAGKVAAE--K-APPSV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC10A01]_KJ927156 [III-Alpha4-ARCTIC10A01] PRGD_OTU005d_62c37422af6d9d7dee0b8e61b3648af9 gb|KJ927156| PRGD_OTU005d_62c37422af6d9d7dee0b8e61b3648af9, putative proteorhodopsin gene, partial cds. PRGD_OTU005d_62c37422af6d9d7dee0b8e61b3648af9, putative proteorhodopsin gene, partial cds. KJ927156 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC10A01-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC10A01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Bering strait marine 67.49 -168.12 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185; 67.49, -168.12) CTGATCACGGTGCCACTCTTGATGGTAGAATTTTATCTTATCTTGCGTGCAATCACAAATGTTTCTGGTGGAATTTTCTGGCGCTTGATGATTGGTACGATGGTAATGTTGGTTGGCGGCTATATGGGCGAAGCCGGTTACATAAATGCAATGTTTGGATTTATCGTCGGTATGGTCGGCTGGGCCTACATTCTATATGAAATCTTCTTTGGTGAAGCAGGGAAAGTTGCAGCTGAAAAAGCTCCTCCATCGGTGCAATCTGCTTTTGTAACAATGCGTTGGATCGTGACCATC LITVPLLMVEFYLILRAITNVSGGIFWRLMIGTMVMLVGGYMGEAGYINAMFGFIVGMVGWAYILYEIFFGEAGKVAAEKAPPSVQSAFVTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACGGTGCCACTCTTGATGGTAGAATTTTATCTTATCTTGCGTGCA---------ATC---ACAAATGTTTCTGGT---GGAATT------------------------------------TTCTGGCGC---TTGATGATTGGTACGATGGTAATGTTGGTTGGCGGCTATATGGGCGAA---------GCC------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGCA------------------ATGTTTGGA---TTTATCGTCGGTATGGTCGGCTGGGCCTACATTCTATATGAAATC---------------TTC------TTT---GGTGAAGCAGGGAAAGTTGCAGCTGAA------AAA---GCTCCTCCATCGGTG---CAA---TCT---GCT---TTT---GTA---ACAATG---CGTTGGATCGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGTMVMLVGGYMGE---A------G--Y-----------I----------------------NA------MFG-FIVGMVGWAYILYEI-----F--F-GEAGKVAAE--K-APPSV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC10A01]_KJ927166 [III-Alpha4-ARCTIC10A01] PRGD_OTU005d_e53637356fa9b1cb643fbd1abfd5cbb8 gb|KJ927166| PRGD_OTU005d_e53637356fa9b1cb643fbd1abfd5cbb8, putative proteorhodopsin gene, partial cds. PRGD_OTU005d_e53637356fa9b1cb643fbd1abfd5cbb8, putative proteorhodopsin gene, partial cds. KJ927166 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC10A01-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC10A01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (33.935, 18.508) CTGATCACGGTGCCACTCTTGATGGTAGAATTTTATCTTATCTTGCGTGCAATCACAAATGTTTCTGGCGGAATTTTCTGGCGCTTGATGATTGGTACGATGGTAATGTTGGTTGGCGGCTATATGGGCGAAGCCGGTTACATAAATGCAATGTTTGGATTTATCGTCGGTATGGTCGGCTGGGCCTACATTCTATATGAAATCTTCTTTGGAGAAGCAGGGAAAGTTGCAGCTGAAAAAGCTCCTCCATCGGTGCAATCGGCCTTCGTAACAATGCGTTGGATCGTGACCATC LITVPLLMVEFYLILRAITNVSGGIFWRLMIGTMVMLVGGYMGEAGYINAMFGFIVGMVGWAYILYEIFFGEAGKVAAEKAPPSVQSAFVTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACGGTGCCACTCTTGATGGTAGAATTTTATCTTATCTTGCGTGCA---------ATC---ACAAATGTTTCTGGC---GGAATT------------------------------------TTCTGGCGC---TTGATGATTGGTACGATGGTAATGTTGGTTGGCGGCTATATGGGCGAA---------GCC------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGCA------------------ATGTTTGGA---TTTATCGTCGGTATGGTCGGCTGGGCCTACATTCTATATGAAATC---------------TTC------TTT---GGAGAAGCAGGGAAAGTTGCAGCTGAA------AAA---GCTCCTCCATCGGTG---CAA---TCG---GCC---TTC---GTA---ACAATG---CGTTGGATCGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGTMVMLVGGYMGE---A------G--Y-----------I----------------------NA------MFG-FIVGMVGWAYILYEI-----F--F-GEAGKVAAE--K-APPSV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC10A01]_KJ927151 [III-Alpha4-ARCTIC10A01] PRGD_OTU005d_otuREP_f724e32e2ecce27247a031aa3bd736f7 gb|KJ927151| PRGD_OTU005d_otuREP_f724e32e2ecce27247a031aa3bd736f7, putative proteorhodopsin gene, partial cds. PRGD_OTU005d_otuREP_f724e32e2ecce27247a031aa3bd736f7, putative proteorhodopsin gene, partial cds. KJ927151 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC10A01-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC10A01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTGATCACGGTTCCACTCTTGATGGTAGAATTTTATCTTATCTTGCGTGCAATCACAAATGTTTCTGGCGGAATTTTCTGGCGCTTGATGATCGGTACGATGGTAATGTTGGTCGGCGGCTATATGGGCGAAGCCGGTTACATAAATGCAATGTTTGGATTTATCGTCGGTATGGTCGGCTGGGCCTACATCCTATATGAAATCTTCTTTGGAGAAGCAGGGAAAGTTGCAGCTGAAAAAGCTCCTCCATCGGTGCAATCGGCCTTCGTAACAATGCGTTGGATCGTGACCATC LITVPLLMVEFYLILRAITNVSGGIFWRLMIGTMVMLVGGYMGEAGYINAMFGFIVGMVGWAYILYEIFFGEAGKVAAEKAPPSVQSAFVTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACGGTTCCACTCTTGATGGTAGAATTTTATCTTATCTTGCGTGCA---------ATC---ACAAATGTTTCTGGC---GGAATT------------------------------------TTCTGGCGC---TTGATGATCGGTACGATGGTAATGTTGGTCGGCGGCTATATGGGCGAA---------GCC------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGCA------------------ATGTTTGGA---TTTATCGTCGGTATGGTCGGCTGGGCCTACATCCTATATGAAATC---------------TTC------TTT---GGAGAAGCAGGGAAAGTTGCAGCTGAA------AAA---GCTCCTCCATCGGTG---CAA---TCG---GCC---TTC---GTA---ACAATG---CGTTGGATCGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGTMVMLVGGYMGE---A------G--Y-----------I----------------------NA------MFG-FIVGMVGWAYILYEI-----F--F-GEAGKVAAE--K-APPSV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC10A01]_KJ927153 [III-Alpha4-ARCTIC10A01] PRGD_OTU005d_1accbda5c2796b35637e037db8128882 gb|KJ927153| PRGD_OTU005d_1accbda5c2796b35637e037db8128882, putative proteorhodopsin gene, partial cds. PRGD_OTU005d_1accbda5c2796b35637e037db8128882, putative proteorhodopsin gene, partial cds. KJ927153 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC10A01-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC10A01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) CTGATCACTGTTCCACTCTTGATGGTAGAATTTTATCTTATTTTGCGTGCAATCACAAATGTTTCTGGTGGAATTTTCTGGCGCTTGATGATCGGTACGATGGTAATGTTGGTCGGCGGCTATATGGGTGAAGCCGGTTACATAAACGCAATGCTTGGATTTATCGTCGGCATGGTCGGCTGGGCCTACATCCTATATGAAATCTTCTTTGGTGAAGCAGGGAAAGTTGCAGCCGAAAAAGCTCCGCCATCGGTGCAATCTGCCTTCGTAACAATGCGTTGGATTGTGACCATC LITVPLLMVEFYLILRAITNVSGGIFWRLMIGTMVMLVGGYMGEAGYINAMLGFIVGMVGWAYILYEIFFGEAGKVAAEKAPPSVQSAFVTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTTCCACTCTTGATGGTAGAATTTTATCTTATTTTGCGTGCA---------ATC---ACAAATGTTTCTGGT---GGAATT------------------------------------TTCTGGCGC---TTGATGATCGGTACGATGGTAATGTTGGTCGGCGGCTATATGGGTGAA---------GCC------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AACGCA------------------ATGCTTGGA---TTTATCGTCGGCATGGTCGGCTGGGCCTACATCCTATATGAAATC---------------TTC------TTT---GGTGAAGCAGGGAAAGTTGCAGCCGAA------AAA---GCTCCGCCATCGGTG---CAA---TCT---GCC---TTC---GTA---ACAATG---CGTTGGATTGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGTMVMLVGGYMGE---A------G--Y-----------I----------------------NA------MLG-FIVGMVGWAYILYEI-----F--F-GEAGKVAAE--K-APPSV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-ARCTIC10A01]_KJ927161 [III-Alpha4-ARCTIC10A01] PRGD_OTU005d_b40b5fcbe72783d12e599c7db3244f33 gb|KJ927161| PRGD_OTU005d_b40b5fcbe72783d12e599c7db3244f33, putative proteorhodopsin gene, partial cds. PRGD_OTU005d_b40b5fcbe72783d12e599c7db3244f33, putative proteorhodopsin gene, partial cds. KJ927161 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/ARCTIC10A01-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 ARCTIC10A01-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; ; 67.49, -168.12), English Channel (48.7717, -3.9683) TTGATTACTGTTCCACTCTTGATGGTGGAATTTTATCTTATCTTGCGTGCGATCACAAATGTTTCTGGCGGAATTTTCTGGCGCTTGATGATCGGTACGATGGTAATGTTAGTCGGCGGCTATATGGGCGAAGCCGGCTACATAAATGCAATGGTTGGATTTATTATTGGTATGCTCGGCTGGGCCTACATACTATATGAAATCTTCTTTGGAGAAGCAGGGAAAGTTGCGGCTGAAAAAGCTCCGGCATCGGTACAATCTGCCTTCGTAACAATGCGTTGGATTGTGACCATC LITVPLLMVEFYLILRAITNVSGGIFWRLMIGTMVMLVGGYMGEAGYINAMVGFIIGMLGWAYILYEIFFGEAGKVAAEKAPASVQSAFVTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTTCCACTCTTGATGGTGGAATTTTATCTTATCTTGCGTGCG---------ATC---ACAAATGTTTCTGGC---GGAATT------------------------------------TTCTGGCGC---TTGATGATCGGTACGATGGTAATGTTAGTCGGCGGCTATATGGGCGAA---------GCC------------------GGC------TAC---------------------------------ATA------------------------------------------------------------------AATGCA------------------ATGGTTGGA---TTTATTATTGGTATGCTCGGCTGGGCCTACATACTATATGAAATC---------------TTC------TTT---GGAGAAGCAGGGAAAGTTGCGGCTGAA------AAA---GCTCCGGCATCGGTA---CAA---TCT---GCC---TTC---GTA---ACAATG---CGTTGGATTGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGTMVMLVGGYMGE---A------G--Y-----------I----------------------NA------MVG-FIIGMLGWAYILYEI-----F--F-GEAGKVAAE--K-APASV-Q-S-A-F-V-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-a]_KJ927173 [III-Alpha4-a] PRGD_OTU005e_d066d2c1ee336a006513c2d2aef22286 gb|KJ927173| PRGD_OTU005e_d066d2c1ee336a006513c2d2aef22286, putative proteorhodopsin gene, partial cds. PRGD_OTU005e_d066d2c1ee336a006513c2d2aef22286, putative proteorhodopsin gene, partial cds. KJ927173 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185), English Channel (48.7717, -3.9683) TTGATTACTGTACCTCTGCTGATGGTAGAGTTTTATTTGATCCTACGTGCAATAACCAATGTATCAGGCGGCGTTTTCTGGCGCCTAATGATTGGGACGATGGTTATGTTGGTAGGCGGCTATATGGGCGAAGCTGGGTATATAAGTGCAATGCTCGGTTTCATCGTAGGTATGGCTGGATGGGCATATATACTTTATGAGATTTTCTTCGGCGAAGCTAGTAAAGTTGCTGCAACGGAAGCGCCCGCATCTGTTCAATCAGCGTTTAGCACGATGCGTCTAATCGTAACTATT LITVPLLMVEFYLILRAITNVSGGVFWRLMIGTMVMLVGGYMGEAGYISAMLGFIVGMAGWAYILYEIFFGEASKVAATEAPASVQSAFSTMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTACCTCTGCTGATGGTAGAGTTTTATTTGATCCTACGTGCA---------ATA---ACCAATGTATCAGGC---GGCGTT------------------------------------TTCTGGCGC---CTAATGATTGGGACGATGGTTATGTTGGTAGGCGGCTATATGGGCGAA---------GCT------------------GGG------TAT---------------------------------ATA------------------------------------------------------------------AGTGCA------------------ATGCTCGGT---TTCATCGTAGGTATGGCTGGATGGGCATATATACTTTATGAGATT---------------TTC------TTC---GGCGAAGCTAGTAAAGTTGCTGCAACG------GAA---GCGCCCGCATCTGTT---CAA---TCA---GCG---TTT---AGC---ACGATG---CGTCTAATCGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GV------------FWR-LMIGTMVMLVGGYMGE---A------G--Y-----------I----------------------SA------MLG-FIVGMAGWAYILYEI-----F--F-GEASKVAAT--E-APASV-Q-S-A-F-S-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-a]_KJ927169 [III-Alpha4-a] PRGD_OTU005e_otuREP_72221a120d59b0d030def5a9dfa8179f gb|KJ927169| PRGD_OTU005e_otuREP_72221a120d59b0d030def5a9dfa8179f, putative proteorhodopsin gene, partial cds. PRGD_OTU005e_otuREP_72221a120d59b0d030def5a9dfa8179f, putative proteorhodopsin gene, partial cds. KJ927169 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATTACTGTACCTCTGCTGATGGTAGAGTTTTATTTGATCCTACGTGCAATAACCAATGTATCAGGCGGCGTTTTCTGGCGCCTAATGATTGGGACGATGGTTATGTTGGTAGGCGGCTATATGGGCGAAGCTGGGTATATAAGTGCAATGCTCGGTTTCATCGTAGGTATGGCTGGATGGGCATATATACTTTATGAGATTTTCTTCGGCGAAGCTAGTAAAGTTGCTGCACAGGAAGCGCCCGCATCTGTTCAATCAGCGTTTAGCACGATGCGTCTAATCGTAACTATC LITVPLLMVEFYLILRAITNVSGGVFWRLMIGTMVMLVGGYMGEAGYISAMLGFIVGMAGWAYILYEIFFGEASKVAAQEAPASVQSAFSTMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTACCTCTGCTGATGGTAGAGTTTTATTTGATCCTACGTGCA---------ATA---ACCAATGTATCAGGC---GGCGTT------------------------------------TTCTGGCGC---CTAATGATTGGGACGATGGTTATGTTGGTAGGCGGCTATATGGGCGAA---------GCT------------------GGG------TAT---------------------------------ATA------------------------------------------------------------------AGTGCA------------------ATGCTCGGT---TTCATCGTAGGTATGGCTGGATGGGCATATATACTTTATGAGATT---------------TTC------TTC---GGCGAAGCTAGTAAAGTTGCTGCACAG------GAA---GCGCCCGCATCTGTT---CAA---TCA---GCG---TTT---AGC---ACGATG---CGTCTAATCGTAACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GV------------FWR-LMIGTMVMLVGGYMGE---A------G--Y-----------I----------------------SA------MLG-FIVGMAGWAYILYEI-----F--F-GEASKVAAQ--E-APASV-Q-S-A-F-S-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-a]_KJ927171 [III-Alpha4-a] PRGD_OTU005e_593f4ce21bbfcfc73f81f8fb14456d46 gb|KJ927171| PRGD_OTU005e_593f4ce21bbfcfc73f81f8fb14456d46, putative proteorhodopsin gene, partial cds. PRGD_OTU005e_593f4ce21bbfcfc73f81f8fb14456d46, putative proteorhodopsin gene, partial cds. KJ927171 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185) TTGATTACTGTACCTCTGCTGATGGTAGAGTTTTATTTGATCCTACGTGCAATAACCACTGTATCAGGCGGCGTTTTCTGGCGCCTAATGATTGGGACGATGGTTATGTTGATAGGCGGCTATATGGGCGAAGCTGGGTATATAAGTGCAATGCTCGGTTTCATCGTAGGTATGGCTGGATGGGCATTTATACTTTATGAGATTTTCTTCGGCGAAGCTAGTAAAGTTGCGGCACAGGAAGCGCCTGCATCTGTTCAATCAGCGTTTAGCACGATGCGTCTAATCGTGACTATT LITVPLLMVEFYLILRAITTVSGGVFWRLMIGTMVMLIGGYMGEAGYISAMLGFIVGMAGWAFILYEIFFGEASKVAAQEAPASVQSAFSTMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTACCTCTGCTGATGGTAGAGTTTTATTTGATCCTACGTGCA---------ATA---ACCACTGTATCAGGC---GGCGTT------------------------------------TTCTGGCGC---CTAATGATTGGGACGATGGTTATGTTGATAGGCGGCTATATGGGCGAA---------GCT------------------GGG------TAT---------------------------------ATA------------------------------------------------------------------AGTGCA------------------ATGCTCGGT---TTCATCGTAGGTATGGCTGGATGGGCATTTATACTTTATGAGATT---------------TTC------TTC---GGCGAAGCTAGTAAAGTTGCGGCACAG------GAA---GCGCCTGCATCTGTT---CAA---TCA---GCG---TTT---AGC---ACGATG---CGTCTAATCGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TTVSG-GV------------FWR-LMIGTMVMLIGGYMGE---A------G--Y-----------I----------------------SA------MLG-FIVGMAGWAFILYEI-----F--F-GEASKVAAQ--E-APASV-Q-S-A-F-S-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-a]_KJ927172 [III-Alpha4-a] PRGD_OTU005e_5bc2c5b2639b3b119282d1fb70452a8b gb|KJ927172| PRGD_OTU005e_5bc2c5b2639b3b119282d1fb70452a8b, putative proteorhodopsin gene, partial cds. PRGD_OTU005e_5bc2c5b2639b3b119282d1fb70452a8b, putative proteorhodopsin gene, partial cds. KJ927172 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185) CTAATCACTGTTCCGCTGTTGATGGTGGAATTCTACTTGATCCTGCGCGCGATCACTAACGTGTCAGGCGGCATTTTCTGGCGCCTGATGATTGGTACGATGGTTATGTTGGTTGGCGGTTATATGGGCGAAGCTGGCTATATAAATGCAATGCTTGGATTCATCGTGGGTATGGCCGGCTGGGCATTTATCCTCTATGAGATTTTCCTCGGTGAAGCCAGTAAAGTTGCTGCTGAGCAAGCTCCAGAATCAGTACAATCTGCTTTTAAAACGATGCGGTGGATCGTGACTATC LITVPLLMVEFYLILRAITNVSGGIFWRLMIGTMVMLVGGYMGEAGYINAMLGFIVGMAGWAFILYEIFLGEASKVAAEQAPESVQSAFKTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACTGTTCCGCTGTTGATGGTGGAATTCTACTTGATCCTGCGCGCG---------ATC---ACTAACGTGTCAGGC---GGCATT------------------------------------TTCTGGCGC---CTGATGATTGGTACGATGGTTATGTTGGTTGGCGGTTATATGGGCGAA---------GCT------------------GGC------TAT---------------------------------ATA------------------------------------------------------------------AATGCA------------------ATGCTTGGA---TTCATCGTGGGTATGGCCGGCTGGGCATTTATCCTCTATGAGATT---------------TTC------CTC---GGTGAAGCCAGTAAAGTTGCTGCTGAG------CAA---GCTCCAGAATCAGTA---CAA---TCT---GCT---TTT---AAA---ACGATG---CGGTGGATCGTGACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGTMVMLVGGYMGE---A------G--Y-----------I----------------------NA------MLG-FIVGMAGWAFILYEI-----F--L-GEASKVAAE--Q-APESV-Q-S-A-F-K-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-a]_KJ929680 [III-Alpha4-a] PRGD_OTU192_otuREP_622f38b07a8bf0f4605ba2a446344da4 gb|KJ929680| PRGD_OTU192_otuREP_622f38b07a8bf0f4605ba2a446344da4, putative proteorhodopsin gene, partial cds. PRGD_OTU192_otuREP_622f38b07a8bf0f4605ba2a446344da4, putative proteorhodopsin gene, partial cds. KJ929680 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) CTTATAACTGTTCCACTTTTGATGGTAGAATTTTACCTGATCCTGCGCGCAATCACCAACGTTTCTAGCGGTATTTTTTGGAAGCTAATGCTCGGTTCAATCGCCATGTTGGCTTTTGGTTACCTGGGCGAAGCTGGCTACATGAACGCAAAGCTCGCCTTCATCTTGGGGATGGCAGGTTGGGCGTTCATTCTCTATGAAATTTTCATGGGTGAAGCAAGCCAAGTTGCTGCCGAGCAAGCACCAGAATCTGTGCAATCCGCTTTCACAACAATGCGTTGGATCGTGTCAATC LITVPLLMVEFYLILRAITNVSSGIFWKLMLGSIAMLAFGYLGEAGYMNAKLAFILGMAGWAFILYEIFMGEASQVAAEQAPESVQSAFTTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATAACTGTTCCACTTTTGATGGTAGAATTTTACCTGATCCTGCGCGCA---------ATC---ACCAACGTTTCTAGC---GGTATT------------------------------------TTTTGGAAG---CTAATGCTCGGTTCAATCGCCATGTTGGCTTTTGGTTACCTGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AACGCA------------------AAGCTCGCC---TTCATCTTGGGGATGGCAGGTTGGGCGTTCATTCTCTATGAAATT---------------TTC------ATG---GGTGAAGCAAGCCAAGTTGCTGCCGAG------CAA---GCACCAGAATCTGTG---CAA---TCC---GCT---TTC---ACA---ACAATG---CGTTGGATCGTGTCAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSS-GI------------FWK-LMLGSIAMLAFGYLGE---A------G--Y-----------M----------------------NA------KLA-FILGMAGWAFILYEI-----F--M-GEASQVAAE--Q-APESV-Q-S-A-F-T-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-a]_KJ929681 [III-Alpha4-a] PRGD_OTU192_afcca6cae2764bea6af8488fadb04a3d gb|KJ929681| PRGD_OTU192_afcca6cae2764bea6af8488fadb04a3d, putative proteorhodopsin gene, partial cds. PRGD_OTU192_afcca6cae2764bea6af8488fadb04a3d, putative proteorhodopsin gene, partial cds. KJ929681 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) CTTATAACTGTTCCACTTTTGATGGTAGAATTTTACCTGATCCTGCGCGCAATCACCAACGTTTCTAGCGGTATTTTTTGGAAGCTAATGCTCGGTTCAATCGCCATGTTAGCTTTTGGTTACCTGGGCGAAGCTGGATACATGAACGCAAAGCTCGCCTTCATCTTGGGGATGGCAGGTTGGGCGTTCATTCTCTATGAAATCTTCATGGGTGAAGCAAGCCAAGTTGCCGCCGAGCAAGCACCAGAGTCTGTGCAATCCGCTTTCACAACAATGCGTTGGATCGTGTCAATC LITVPLLMVEFYLILRAITNVSSGIFWKLMLGSIAMLAFGYLGEAGYMNAKLAFILGMAGWAFILYEIFMGEASQVAAEQAPESVQSAFTTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATAACTGTTCCACTTTTGATGGTAGAATTTTACCTGATCCTGCGCGCA---------ATC---ACCAACGTTTCTAGC---GGTATT------------------------------------TTTTGGAAG---CTAATGCTCGGTTCAATCGCCATGTTAGCTTTTGGTTACCTGGGCGAA---------GCT------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------AACGCA------------------AAGCTCGCC---TTCATCTTGGGGATGGCAGGTTGGGCGTTCATTCTCTATGAAATC---------------TTC------ATG---GGTGAAGCAAGCCAAGTTGCCGCCGAG------CAA---GCACCAGAGTCTGTG---CAA---TCC---GCT---TTC---ACA---ACAATG---CGTTGGATCGTGTCAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSS-GI------------FWK-LMLGSIAMLAFGYLGE---A------G--Y-----------M----------------------NA------KLA-FILGMAGWAFILYEI-----F--M-GEASQVAAE--Q-APESV-Q-S-A-F-T-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-a]_KJ927170 [III-Alpha4-a] PRGD_OTU005e_3594d3368808feafb1193009c402bede gb|KJ927170| PRGD_OTU005e_3594d3368808feafb1193009c402bede, putative proteorhodopsin gene, partial cds. PRGD_OTU005e_3594d3368808feafb1193009c402bede, putative proteorhodopsin gene, partial cds. KJ927170 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATAACTGTTCCGCTCCTGATGGTAGAATTTTACTTGATCCTGCGCGCAATCACCAATGTTTCTGGTGGTATCTTTTGGCGTCTGATGATTGGGTCAATTATCATGTTGGCAGCAGGTTATATGGGCGAAGCTGGATACATCAATGCAAAGCTTGGCTTCATCATCGGGATGGCAGGTTGGGCATACATTTTGTATGAAATCTTCATGGGAGAGGCAAGCCAAGTTGCTGCTGAGCAAGCACCAGAATCTGTACAATCCGCTTTCACAACAATGCGTTGGATCGTATCAATC LITVPLLMVEFYLILRAITNVSGGIFWRLMIGSIIMLAAGYMGEAGYINAKLGFIIGMAGWAYILYEIFMGEASQVAAEQAPESVQSAFTTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACTGTTCCGCTCCTGATGGTAGAATTTTACTTGATCCTGCGCGCA---------ATC---ACCAATGTTTCTGGT---GGTATC------------------------------------TTTTGGCGT---CTGATGATTGGGTCAATTATCATGTTGGCAGCAGGTTATATGGGCGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATGCA------------------AAGCTTGGC---TTCATCATCGGGATGGCAGGTTGGGCATACATTTTGTATGAAATC---------------TTC------ATG---GGAGAGGCAAGCCAAGTTGCTGCTGAG------CAA---GCACCAGAATCTGTA---CAA---TCC---GCT---TTC---ACA---ACAATG---CGTTGGATCGTATCAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGSIIMLAAGYMGE---A------G--Y-----------I----------------------NA------KLG-FIIGMAGWAYILYEI-----F--M-GEASQVAAE--Q-APESV-Q-S-A-F-T-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha4-a]_KJ927174 [III-Alpha4-a] PRGD_OTU005e_d563ab9321d9a3e7cd52a1e353afaef8 gb|KJ927174| PRGD_OTU005e_d563ab9321d9a3e7cd52a1e353afaef8, putative proteorhodopsin gene, partial cds. PRGD_OTU005e_d563ab9321d9a3e7cd52a1e353afaef8, putative proteorhodopsin gene, partial cds. KJ927174 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185) CTTATCACTGTACCACTGCTGATGGTAGAATTCTACCTCATCCTGCGGGCAATCACCAATGTGTCCGGTGGTATCTTCTGGCGTCTGATGATCGGTTCGATCATCATGCTGGCAGCAGGCTACATGGGCGAAGCTGGCTACATCAATGCAAAGCTGGGTTTCATCATCGGGATGGCCGGTTGGGCATACATCCTCTATGAAATCTTCATGGGCGAAGCCAGCCAAGTTGCTTCCGAGCAAGCACCAGAATCTGTACAATCCGCTTTCAAAACAATGCGTTGGATTGTATCAATC LITVPLLMVEFYLILRAITNVSGGIFWRLMIGSIIMLAAGYMGEAGYINAKLGFIIGMAGWAYILYEIFMGEASQVASEQAPESVQSAFKTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATCACTGTACCACTGCTGATGGTAGAATTCTACCTCATCCTGCGGGCA---------ATC---ACCAATGTGTCCGGT---GGTATC------------------------------------TTCTGGCGT---CTGATGATCGGTTCGATCATCATGCTGGCAGCAGGCTACATGGGCGAA---------GCT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCA------------------AAGCTGGGT---TTCATCATCGGGATGGCCGGTTGGGCATACATCCTCTATGAAATC---------------TTC------ATG---GGCGAAGCCAGCCAAGTTGCTTCCGAG------CAA---GCACCAGAATCTGTA---CAA---TCC---GCT---TTC---AAA---ACAATG---CGTTGGATTGTATCAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSG-GI------------FWR-LMIGSIIMLAAGYMGE---A------G--Y-----------I----------------------NA------KLG-FIIGMAGWAYILYEI-----F--M-GEASQVASE--Q-APESV-Q-S-A-F-K-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926949 [III-Alpha3-a] PRGD_OTU004a_33ef30b7674636cf3c1c6a608fe3510c gb|KJ926949| PRGD_OTU004a_33ef30b7674636cf3c1c6a608fe3510c, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_33ef30b7674636cf3c1c6a608fe3510c, putative proteorhodopsin gene, partial cds. KJ926949 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTGATTACAGTACCGCTGCTAATGGTTGAATTCTACTTAATTCTTCGGGCAGTCACAGCTGTATCAGGTGGCATTTTCTGGCGTCTAATGATCGGAACACTGGTTATGCTTGTCGGCGGCTACGCTGGTGAGGTCGGCTATATCGGTGCATGGCCAGGCTTTATTATCGGCATGGTCGGTTGGGCGTACATCCTGTATGAAATCTTTGCAGGTGAAGCTAGCCGTGTTGCATCTGAAAAAGCATCCCCAGCAGTTCAGTCAGCTTTTTCAACAATGCGCTGGATTGTATCTATT LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWPGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACAGTACCGCTGCTAATGGTTGAATTCTACTTAATTCTTCGGGCA---------GTC---ACAGCTGTATCAGGT---GGCATT------------------------------------TTCTGGCGT---CTAATGATCGGAACACTGGTTATGCTTGTCGGCGGCTACGCTGGTGAG---------GTC------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------GGTGCA------------------TGGCCAGGC---TTTATTATCGGCATGGTCGGTTGGGCGTACATCCTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGCCGTGTTGCATCTGAA------AAA---GCATCCCCAGCAGTT---CAG---TCA---GCT---TTT---TCA---ACAATG---CGCTGGATTGTATCTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WPG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926934 [III-Alpha3-a] PRGD_OTU004a_1cfef23799f7b62a48ab84d23af32a25 gb|KJ926934| PRGD_OTU004a_1cfef23799f7b62a48ab84d23af32a25, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_1cfef23799f7b62a48ab84d23af32a25, putative proteorhodopsin gene, partial cds. KJ926934 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATTACAGTCCCGCTGCTAATGGTTGAATTCTACTTAATTCTTCGGGCAGTCACAGCTGTATCAGGTGGCATTTTCTGGCGTCTAATGATCGGAACACTGGTTATGCTTGTCGGCGGCTACGCTGGTGAGGTCGGCTATATCGGTGCATGGCCAGGCTTTATTATCGGCATGGTCGGTTGGGCGTACATCCTGTATGAAATCTTTGCGGGTGAAGCTAGCCGTGTCGCATCTGAAAAAGCATCCCCAGCAGTTCAGTCAGCTTTTTCAACAATGCGCTGGATTGTATCTATT LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWPGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACAGTCCCGCTGCTAATGGTTGAATTCTACTTAATTCTTCGGGCA---------GTC---ACAGCTGTATCAGGT---GGCATT------------------------------------TTCTGGCGT---CTAATGATCGGAACACTGGTTATGCTTGTCGGCGGCTACGCTGGTGAG---------GTC------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------GGTGCA------------------TGGCCAGGC---TTTATTATCGGCATGGTCGGTTGGGCGTACATCCTGTATGAAATC---------------TTT------GCG---GGTGAAGCTAGCCGTGTCGCATCTGAA------AAA---GCATCCCCAGCAGTT---CAG---TCA---GCT---TTT---TCA---ACAATG---CGCTGGATTGTATCTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WPG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926937 [III-Alpha3-a] PRGD_OTU004a_1f3af90d78733e885212704a450e5306 gb|KJ926937| PRGD_OTU004a_1f3af90d78733e885212704a450e5306, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_1f3af90d78733e885212704a450e5306, putative proteorhodopsin gene, partial cds. KJ926937 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -33.9602, -73.3769), English Channel (48.7717, -3.9683) CTGATTACTGTACCGCTGCTAATGGTTGAATTCTACCTGATTCTTCGGGCAGTCACAGCTGTATCAGGTGGCATTTTCTGGCGTCTAATGATCGGAACACTGGTTATGCTTGTCGGCGGCTACGCTGGTGAGGTCGGCTATATCGGTGCATGGCCAGGCTTTATTATCGGCATGGTCGGTTGGGCGTACATCCTGTATGAAATCTTTGCAGGTGAAGCTAGCCGTGTTGCATCTGAAAAAGCATCCCCAGCAGTTCAGTCAGCTTTTTCAACAATGCGCTGGATTGTATCTATT LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWPGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTACCGCTGCTAATGGTTGAATTCTACCTGATTCTTCGGGCA---------GTC---ACAGCTGTATCAGGT---GGCATT------------------------------------TTCTGGCGT---CTAATGATCGGAACACTGGTTATGCTTGTCGGCGGCTACGCTGGTGAG---------GTC------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------GGTGCA------------------TGGCCAGGC---TTTATTATCGGCATGGTCGGTTGGGCGTACATCCTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGCCGTGTTGCATCTGAA------AAA---GCATCCCCAGCAGTT---CAG---TCA---GCT---TTT---TCA---ACAATG---CGCTGGATTGTATCTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WPG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926960 [III-Alpha3-a] PRGD_OTU004a_50656cff50e31fcba850d074a99651dc gb|KJ926960| PRGD_OTU004a_50656cff50e31fcba850d074a99651dc, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_50656cff50e31fcba850d074a99651dc, putative proteorhodopsin gene, partial cds. KJ926960 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATTACTGTACCGCTGCTAATGGTTGAATTCTACCTAATTCTCCGGGCAGTCACAGCTGTATCAGGTGGCATTTTCTGGCGTCTAATGATCGGAACACTGGTTATGCTTGTCGGCGGCTACGCTGGTGAGGTGGGCTATATCGGTGCATGGCCAGGCTTTATTATCGGCATGGTCGGTTGGGCGTACATCCTGTATGAAATCTTTGCAGGTGAAGCTAGCCGTGTTGCATCTGAAAAAGCATCCCCGGCAGTTCAATCAGCTTTTTCAACAATGCGTTGGATTGTATCTATT LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWPGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTACCGCTGCTAATGGTTGAATTCTACCTAATTCTCCGGGCA---------GTC---ACAGCTGTATCAGGT---GGCATT------------------------------------TTCTGGCGT---CTAATGATCGGAACACTGGTTATGCTTGTCGGCGGCTACGCTGGTGAG---------GTG------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------GGTGCA------------------TGGCCAGGC---TTTATTATCGGCATGGTCGGTTGGGCGTACATCCTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGCCGTGTTGCATCTGAA------AAA---GCATCCCCGGCAGTT---CAA---TCA---GCT---TTT---TCA---ACAATG---CGTTGGATTGTATCTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WPG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926985 [III-Alpha3-a] PRGD_OTU004a_82c5facd7d2647caaee027a3a422a33b gb|KJ926985| PRGD_OTU004a_82c5facd7d2647caaee027a3a422a33b, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_82c5facd7d2647caaee027a3a422a33b, putative proteorhodopsin gene, partial cds. KJ926985 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATTACAGTACCGCTGCTAATGGTTGAATTCTACCTAATTCTTCGGGCAGTCACAGCTGTATCAGGTGGCATTTTCTGGCGTCTAATGATCGGAACACTGGTTATGCTTGTCGGCGGCTACGCTGGTGAGGTCGGCTATATCGGTGCATGGCCAGGCTTTATTATCGGCATGGTCGGTTGGGCGTACATCCTGTATGAAATCTTTGCAGGTGAAGCTAGCCGTGTTGCATCTGAAAAAGCATCCCCGGCAGTTCAATCAGCTTTTTCAACAATGCGTTGGATTGTATCTATT LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWPGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACAGTACCGCTGCTAATGGTTGAATTCTACCTAATTCTTCGGGCA---------GTC---ACAGCTGTATCAGGT---GGCATT------------------------------------TTCTGGCGT---CTAATGATCGGAACACTGGTTATGCTTGTCGGCGGCTACGCTGGTGAG---------GTC------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------GGTGCA------------------TGGCCAGGC---TTTATTATCGGCATGGTCGGTTGGGCGTACATCCTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGCCGTGTTGCATCTGAA------AAA---GCATCCCCGGCAGTT---CAA---TCA---GCT---TTT---TCA---ACAATG---CGTTGGATTGTATCTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WPG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ927004 [III-Alpha3-a] PRGD_OTU004a_b9cde181d2e8b0f7140feabe5724965a gb|KJ927004| PRGD_OTU004a_b9cde181d2e8b0f7140feabe5724965a, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_b9cde181d2e8b0f7140feabe5724965a, putative proteorhodopsin gene, partial cds. KJ927004 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683) CTGATTACTGTACCGCTGCTAATGGTTGAATTCTACCTAATCCTTCGGGCAGTCACAGCTGTATCAGGTGGCATTTTCTGGCGTCTAATGATCGGAACACTGGTTATGCTTGTCGGCGGCTACGCTGGTGAGGTCGGCTATATCGGTGCATGGCCAGGCTTTATTATCGGCATGGTCGGTTGGGCGTACATCCTGTATGAAATCTTTGCAGGTGAAGCTAGCCGTGTTGCATCTGAAAAAGCATCTCCAGCAGTTCAATCAGCTTTTTCAACAATGCGTTGGATTGTATCTATT LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWPGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTACCGCTGCTAATGGTTGAATTCTACCTAATCCTTCGGGCA---------GTC---ACAGCTGTATCAGGT---GGCATT------------------------------------TTCTGGCGT---CTAATGATCGGAACACTGGTTATGCTTGTCGGCGGCTACGCTGGTGAG---------GTC------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------GGTGCA------------------TGGCCAGGC---TTTATTATCGGCATGGTCGGTTGGGCGTACATCCTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGCCGTGTTGCATCTGAA------AAA---GCATCTCCAGCAGTT---CAA---TCA---GCT---TTT---TCA---ACAATG---CGTTGGATTGTATCTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WPG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926947 [III-Alpha3-a] PRGD_OTU004a_2f58d4d30a8826566b1ec58fe19a13c6 gb|KJ926947| PRGD_OTU004a_2f58d4d30a8826566b1ec58fe19a13c6, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_2f58d4d30a8826566b1ec58fe19a13c6, putative proteorhodopsin gene, partial cds. KJ926947 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTGATTACTGTACCGCTGCTAATGGTTGAATTCTACCTAATCCTTCGGGCAGTCACAGCTGTATCAGGTGGCATTTTCTGGCGTCTAATGATCGGAACACTGGTTATGCTTGTCGGCGGCTACGCTGGTGAGGTCGGCTATATCGGCGCATGGCCAGGCTTTATTATCGGCATGGTCGGTTGGGCATACATCCTGTATGAAATCTTTGCAGGTGAAGCTAGCCGTGTTGCATCTGAAAAAGCATCTCCAGCAGTTCAGTCAGCTTTTTCAACAATGCGTTGGATTGTATCTATT LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWPGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTACCGCTGCTAATGGTTGAATTCTACCTAATCCTTCGGGCA---------GTC---ACAGCTGTATCAGGT---GGCATT------------------------------------TTCTGGCGT---CTAATGATCGGAACACTGGTTATGCTTGTCGGCGGCTACGCTGGTGAG---------GTC------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------GGCGCA------------------TGGCCAGGC---TTTATTATCGGCATGGTCGGTTGGGCATACATCCTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGCCGTGTTGCATCTGAA------AAA---GCATCTCCAGCAGTT---CAG---TCA---GCT---TTT---TCA---ACAATG---CGTTGGATTGTATCTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WPG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ927027 [III-Alpha3-a] PRGD_OTU004a_e5e0bc6be159b9254b0914aa6b905d2b gb|KJ927027| PRGD_OTU004a_e5e0bc6be159b9254b0914aa6b905d2b, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_e5e0bc6be159b9254b0914aa6b905d2b, putative proteorhodopsin gene, partial cds. KJ927027 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATTACTGTTCCGCTACTCATGGTTGAATTCTACCTAATCCTTCGGGCAGTCACAGCTGTATCAGGCGGCATTTTTTGGCGTTTAATGATCGGCACAATGGTAATGCTTGTCGGCGGCTACGCTGGTGAGGTCGGCTATATTGGTGCATGGGCAGGCTTTATTATCGGCATGGTCGGCTGGGCATACATTCTGTACGAAATCTTTGCAGGTGAAGCTAGCCGTGTTGCATCTGAAAAAGCATCCCCAGCAGTTCAGTCAGCTTTTTCAACAATGCGTTGGATTGTATCTATT LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTMVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTTCCGCTACTCATGGTTGAATTCTACCTAATCCTTCGGGCA---------GTC---ACAGCTGTATCAGGC---GGCATT------------------------------------TTTTGGCGT---TTAATGATCGGCACAATGGTAATGCTTGTCGGCGGCTACGCTGGTGAG---------GTC------------------GGC------TAT---------------------------------ATT------------------------------------------------------------------GGTGCA------------------TGGGCAGGC---TTTATTATCGGCATGGTCGGCTGGGCATACATTCTGTACGAAATC---------------TTT------GCA---GGTGAAGCTAGCCGTGTTGCATCTGAA------AAA---GCATCCCCAGCAGTT---CAG---TCA---GCT---TTT---TCA---ACAATG---CGTTGGATTGTATCTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTMVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926997 [III-Alpha3-a] PRGD_OTU004a_aed0be141f4a59a83e5c62eda4a1f696 gb|KJ926997| PRGD_OTU004a_aed0be141f4a59a83e5c62eda4a1f696, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_aed0be141f4a59a83e5c62eda4a1f696, putative proteorhodopsin gene, partial cds. KJ926997 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACCTAATTCTTCGGGCAGTCACAGCTGTGTCAGGCGGCATTTTTTGGCGTCTGATGATTGGCACACTGGTCATGCTTGTCGGCGGCTACGCTGGCGAGGTCGGCTATATCGGTGCATGGGCCGGATTCATCATCGGCATGGTCGGTTGGGCGTACATTCTGTATGAAATCTTTGCAGGTGAAGCTAGCCGTGTTGCATCTGAAAAAGCATCCCCAGCAGTTCAGTCAGCTTTTTCAACAATGCGTTGGATTGTGTCTATT LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACCTAATTCTTCGGGCA---------GTC---ACAGCTGTGTCAGGC---GGCATT------------------------------------TTTTGGCGT---CTGATGATTGGCACACTGGTCATGCTTGTCGGCGGCTACGCTGGCGAG---------GTC------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------GGTGCA------------------TGGGCCGGA---TTCATCATCGGCATGGTCGGTTGGGCGTACATTCTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGCCGTGTTGCATCTGAA------AAA---GCATCCCCAGCAGTT---CAG---TCA---GCT---TTT---TCA---ACAATG---CGTTGGATTGTGTCTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926969 [III-Alpha3-a] PRGD_OTU004a_5dc4bd27ebc23ab84a9c12bb2159c69d gb|KJ926969| PRGD_OTU004a_5dc4bd27ebc23ab84a9c12bb2159c69d, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_5dc4bd27ebc23ab84a9c12bb2159c69d, putative proteorhodopsin gene, partial cds. KJ926969 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACCTAATCCTTCGGGCAGTCACAGCTGTGTCAGGCGGCATTTTTTGGCGTCTGATGATTGGTACATTGGTCATGCTTGTCGGCGGCTACGCTGGCGAGGTCGGCTATATCGGCGCATGGGCGGGCTTTATCATCGGCATGGTTGGTTGGGCTTACATCCTGTATGAAATCTTTGCAGGTGAAGCTAGCCGCGTCGCATCTGAAAAGGCATCTCCAGCAGTGCAGTCAGCTTTTTCAACTATGCGTTGGATTGTATCTATT LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACCTAATCCTTCGGGCA---------GTC---ACAGCTGTGTCAGGC---GGCATT------------------------------------TTTTGGCGT---CTGATGATTGGTACATTGGTCATGCTTGTCGGCGGCTACGCTGGCGAG---------GTC------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------GGCGCA------------------TGGGCGGGC---TTTATCATCGGCATGGTTGGTTGGGCTTACATCCTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGCCGCGTCGCATCTGAA------AAG---GCATCTCCAGCAGTG---CAG---TCA---GCT---TTT---TCA---ACTATG---CGTTGGATTGTATCTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ927001 [III-Alpha3-a] PRGD_OTU004a_b5f61231152efd99ef3e98cf12ea2e79 gb|KJ927001| PRGD_OTU004a_b5f61231152efd99ef3e98cf12ea2e79, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_b5f61231152efd99ef3e98cf12ea2e79, putative proteorhodopsin gene, partial cds. KJ927001 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACCTAATCCTTCGGGCAGTCACAGCTGTGTCAGGCGGCATTTTTTGGCGCCTGATGATTGGTACACTGGTCATGCTTGTCGGCGGCTACGCTGGTGAGGTCGGCTATATCGGCGCATGGGCGGGCTTTATTATCGGCATGGTCGGTTGGGCTTACATCCTGTATGAAATCTTTGCAGGCGAAGCTAGCCGCGTCGCATCTGAAAAAGCATCTCCAGCAGTGCAGTCAGCTTTTTCAACTATGCGTTGGATTGTATCTATT LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACCTAATCCTTCGGGCA---------GTC---ACAGCTGTGTCAGGC---GGCATT------------------------------------TTTTGGCGC---CTGATGATTGGTACACTGGTCATGCTTGTCGGCGGCTACGCTGGTGAG---------GTC------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------GGCGCA------------------TGGGCGGGC---TTTATTATCGGCATGGTCGGTTGGGCTTACATCCTGTATGAAATC---------------TTT------GCA---GGCGAAGCTAGCCGCGTCGCATCTGAA------AAA---GCATCTCCAGCAGTG---CAG---TCA---GCT---TTT---TCA---ACTATG---CGTTGGATTGTATCTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ927014 [III-Alpha3-a] PRGD_OTU004a_ca9365c40b0b042f8ffa307343347390 gb|KJ927014| PRGD_OTU004a_ca9365c40b0b042f8ffa307343347390, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_ca9365c40b0b042f8ffa307343347390, putative proteorhodopsin gene, partial cds. KJ927014 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACCTAATCCTTCGGGCAGTCACAGCTGTGTCAGGCGGCATTTTTTGGCGTCTGATGATTGGCACACTGGTCATGCTTGTCGGCGGCTACGCTGGTGAGGTCGGCTATATCGGCGCATGGGCGGGCTTTATTATCGGCATGGTCGGTTGGGCTTACATCCTGTATGAAATCTTTGCAGGCGAAGCTAGCCGCGTCGCATCTGAAAAGGCATCTCCAGCAGTGCAGTCAGCTTTTTCGACTATGCGTTGGATTGTATCTATC LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACCTAATCCTTCGGGCA---------GTC---ACAGCTGTGTCAGGC---GGCATT------------------------------------TTTTGGCGT---CTGATGATTGGCACACTGGTCATGCTTGTCGGCGGCTACGCTGGTGAG---------GTC------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------GGCGCA------------------TGGGCGGGC---TTTATTATCGGCATGGTCGGTTGGGCTTACATCCTGTATGAAATC---------------TTT------GCA---GGCGAAGCTAGCCGCGTCGCATCTGAA------AAG---GCATCTCCAGCAGTG---CAG---TCA---GCT---TTT---TCG---ACTATG---CGTTGGATTGTATCTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926953 [III-Alpha3-a] PRGD_OTU004a_40a7e35017127441afb97d2e4dbb9818 gb|KJ926953| PRGD_OTU004a_40a7e35017127441afb97d2e4dbb9818, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_40a7e35017127441afb97d2e4dbb9818, putative proteorhodopsin gene, partial cds. KJ926953 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683) CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACCTAATCCTTCGGGCAGTTACAGCCGTGTCAGGCGGCATTTTTTGGCGTCTGATGATTGGTACACTGGTCATGCTTGTCGGCGGCTACGCTGGTGAGGTCGGCTACATCGGCGCATGGGCGGGCTTTATTATCGGCATGGTCGGTTGGGCTTACATCCTGTATGAAATCTTTGCAGGCGAAGCTAGCCGCGTCGCATCTGAAAAAGCATCTCCAGCAGTGCAGTCAGCTTTTTCAACTATGCGTTGGATTGTATCTATT LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACCTAATCCTTCGGGCA---------GTT---ACAGCCGTGTCAGGC---GGCATT------------------------------------TTTTGGCGT---CTGATGATTGGTACACTGGTCATGCTTGTCGGCGGCTACGCTGGTGAG---------GTC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------GGCGCA------------------TGGGCGGGC---TTTATTATCGGCATGGTCGGTTGGGCTTACATCCTGTATGAAATC---------------TTT------GCA---GGCGAAGCTAGCCGCGTCGCATCTGAA------AAA---GCATCTCCAGCAGTG---CAG---TCA---GCT---TTT---TCA---ACTATG---CGTTGGATTGTATCTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926996 [III-Alpha3-a] PRGD_OTU004a_a747c5007fa07e0a5622c9ad5396fa20 gb|KJ926996| PRGD_OTU004a_a747c5007fa07e0a5622c9ad5396fa20, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_a747c5007fa07e0a5622c9ad5396fa20, putative proteorhodopsin gene, partial cds. KJ926996 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-35.05, 23.73) CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACCTAATCCTTCGGGCAGTCACAGCTGTTTCAGGCGGCATTTTTTGGCGTCTGATGATTGGTACACTGGTCATGCTTGTCGGCGGCTACGCTGGTGAGGTCGGCTACATCGGCGCATGGGCAGGCTTTATTATCGGCATGGTCGGTTGGGCTTACATCCTGTATGAAATCTTTGCAGGCGAAGCTAGCCGCGTCGCATCTGAAAAGGCATCTCCAGCAGTGCAATCAGCTTTTTCAACTATGCGTTGGATTGTATCTATT LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACCTAATCCTTCGGGCA---------GTC---ACAGCTGTTTCAGGC---GGCATT------------------------------------TTTTGGCGT---CTGATGATTGGTACACTGGTCATGCTTGTCGGCGGCTACGCTGGTGAG---------GTC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------GGCGCA------------------TGGGCAGGC---TTTATTATCGGCATGGTCGGTTGGGCTTACATCCTGTATGAAATC---------------TTT------GCA---GGCGAAGCTAGCCGCGTCGCATCTGAA------AAG---GCATCTCCAGCAGTG---CAA---TCA---GCT---TTT---TCA---ACTATG---CGTTGGATTGTATCTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926973 [III-Alpha3-a] PRGD_OTU004a_68c6ef3b6a22f3cf31fc03a81976e445 gb|KJ926973| PRGD_OTU004a_68c6ef3b6a22f3cf31fc03a81976e445, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_68c6ef3b6a22f3cf31fc03a81976e445, putative proteorhodopsin gene, partial cds. KJ926973 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACCTAATCCTTCGGGCAGTCACAGCTGTGTCAGGCGGCATTTTTTGGCGTCTGATGATTGGCACACTGGTCATGCTTGTCGGCGGCTACGCTGGTGAGGTCGGCTACATCGGCGCATGGGCAGGCTTTATTATCGGCATGGTCGGTTGGGCTTACATCCTGTATGAAATCTTTGCAGGCGAAGCTAGCCGCGTCGCATCTGAAAAGGCATCTCCAGCAGTGCAGTCAGCTTTTTCCACTATGCGTTGGATTGTATCTATT LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACCTAATCCTTCGGGCA---------GTC---ACAGCTGTGTCAGGC---GGCATT------------------------------------TTTTGGCGT---CTGATGATTGGCACACTGGTCATGCTTGTCGGCGGCTACGCTGGTGAG---------GTC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------GGCGCA------------------TGGGCAGGC---TTTATTATCGGCATGGTCGGTTGGGCTTACATCCTGTATGAAATC---------------TTT------GCA---GGCGAAGCTAGCCGCGTCGCATCTGAA------AAG---GCATCTCCAGCAGTG---CAG---TCA---GCT---TTT---TCC---ACTATG---CGTTGGATTGTATCTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ927029 [III-Alpha3-a] PRGD_OTU004a_e89082229414310299423078d24e5fa7 gb|KJ927029| PRGD_OTU004a_e89082229414310299423078d24e5fa7, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_e89082229414310299423078d24e5fa7, putative proteorhodopsin gene, partial cds. KJ927029 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTGATTACTGTTCCGCTACTCATGGTTGAATTCTACCTAATCCTTCGGGCAGTCACAGCTGTGTCAGGCGGCATTTTTTGGCGTTTGATGATTGGTACACTGGTCATGCTTGTCGGCGGCTACGCTGGTGAGGTCGGCTACATCGGTGCATGGGCGGGCTTTATTATCGGCATGGTCGGTTGGGCTTACATCCTGTATGAAATCTTTGCAGGCGAAGCTAGCCGCGTTGCATCTGAAAAGGCATCTCCAGCAGTGCAGTCAGCTTTTTCAACTATGCGTTGGATTGTATCTATT LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTTCCGCTACTCATGGTTGAATTCTACCTAATCCTTCGGGCA---------GTC---ACAGCTGTGTCAGGC---GGCATT------------------------------------TTTTGGCGT---TTGATGATTGGTACACTGGTCATGCTTGTCGGCGGCTACGCTGGTGAG---------GTC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------GGTGCA------------------TGGGCGGGC---TTTATTATCGGCATGGTCGGTTGGGCTTACATCCTGTATGAAATC---------------TTT------GCA---GGCGAAGCTAGCCGCGTTGCATCTGAA------AAG---GCATCTCCAGCAGTG---CAG---TCA---GCT---TTT---TCA---ACTATG---CGTTGGATTGTATCTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ927010 [III-Alpha3-a] PRGD_OTU004a_c6d7cdb93a2c3e6aec609269060ee6cf gb|KJ927010| PRGD_OTU004a_c6d7cdb93a2c3e6aec609269060ee6cf, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_c6d7cdb93a2c3e6aec609269060ee6cf, putative proteorhodopsin gene, partial cds. KJ927010 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACCTAATCCTTCGGGCAGTCACAGCTGTGTCAGGCGGCATTTTTTGGCGTTTGATGATCGGTACACTGGTCATGCTTGTCGGCGGCTACGCTGGTGAGGTCGGCTACATCGGTGCATGGCCTGGCTTTATTATTGGCATGGTCGGTTGGGCTTACATCCTGTACGAAATCTTTGCAGGCGAAGCTAGCCGCGTCGCATCTGAAAAGGCATCTCCAGCAGTGCAGTCAGCTTTTTCAACTATGCGTTGGATTGTATCTATT LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWPGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACCTAATCCTTCGGGCA---------GTC---ACAGCTGTGTCAGGC---GGCATT------------------------------------TTTTGGCGT---TTGATGATCGGTACACTGGTCATGCTTGTCGGCGGCTACGCTGGTGAG---------GTC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------GGTGCA------------------TGGCCTGGC---TTTATTATTGGCATGGTCGGTTGGGCTTACATCCTGTACGAAATC---------------TTT------GCA---GGCGAAGCTAGCCGCGTCGCATCTGAA------AAG---GCATCTCCAGCAGTG---CAG---TCA---GCT---TTT---TCA---ACTATG---CGTTGGATTGTATCTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WPG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926935 [III-Alpha3-a] PRGD_OTU004a_1dce58a4d355b50bba3b2c7bcda984d6 gb|KJ926935| PRGD_OTU004a_1dce58a4d355b50bba3b2c7bcda984d6, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_1dce58a4d355b50bba3b2c7bcda984d6, putative proteorhodopsin gene, partial cds. KJ926935 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATCACTGTGCCGCTACTCATGGTTGAATTCTACCTAATCCTTCGGGCAGTCACAGCTGTGTCAGGCGGCATCTTTTGGCGTCTGATGATCGGCACACTGGTCATGCTTGTCGGCGGCTACGCTGGTGAGGTCGGCTACATCGGTGCATGGGCAGGCTTTATTATCGGCATGGTCGGTTGGGCGTACATTCTGTATGAAATCTTTGCAGGCGAAGCTAGCCGTGTTGCATCTGAAAAGGCATCTCCAGCAGTGCAGTCAGCTTTTTCAACTATGCGTTGGATTGTATCTATT LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTGCCGCTACTCATGGTTGAATTCTACCTAATCCTTCGGGCA---------GTC---ACAGCTGTGTCAGGC---GGCATC------------------------------------TTTTGGCGT---CTGATGATCGGCACACTGGTCATGCTTGTCGGCGGCTACGCTGGTGAG---------GTC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------GGTGCA------------------TGGGCAGGC---TTTATTATCGGCATGGTCGGTTGGGCGTACATTCTGTATGAAATC---------------TTT------GCA---GGCGAAGCTAGCCGTGTTGCATCTGAA------AAG---GCATCTCCAGCAGTG---CAG---TCA---GCT---TTT---TCA---ACTATG---CGTTGGATTGTATCTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926959 [III-Alpha3-a] PRGD_OTU004a_4fe0313d9555e8351f923bacff325e13 gb|KJ926959| PRGD_OTU004a_4fe0313d9555e8351f923bacff325e13, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_4fe0313d9555e8351f923bacff325e13, putative proteorhodopsin gene, partial cds. KJ926959 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683) CTTATTACTGTGCCGCTACTCATGGTTGAATTCTACCTAATCCTTCGGGCAGTCACAGCTGTGTCAGGCGGCATTTTTTGGCGTCTGATGATTGGCACACTGGTCATGCTTGTCGGCGGCTACGCTGGTGAGGTCGGCTACATCGGTGCTTGGGCAGGCTTTATTATTGGTATGGTCGGTTGGGCGTACATTCTGTATGAAATCTTTGCAGGCGAAGCTAGCCGTGTTGCATCTGAAAAGGCATCTCCAGCAGTGCAGTCAGCTTTTTCAACTATGCGTTGGATTGTATCTATT LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATTACTGTGCCGCTACTCATGGTTGAATTCTACCTAATCCTTCGGGCA---------GTC---ACAGCTGTGTCAGGC---GGCATT------------------------------------TTTTGGCGT---CTGATGATTGGCACACTGGTCATGCTTGTCGGCGGCTACGCTGGTGAG---------GTC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------GGTGCT------------------TGGGCAGGC---TTTATTATTGGTATGGTCGGTTGGGCGTACATTCTGTATGAAATC---------------TTT------GCA---GGCGAAGCTAGCCGTGTTGCATCTGAA------AAG---GCATCTCCAGCAGTG---CAG---TCA---GCT---TTT---TCA---ACTATG---CGTTGGATTGTATCTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926967 [III-Alpha3-a] PRGD_OTU004a_59e6b6a5cf73c090318db5e36abb1889 gb|KJ926967| PRGD_OTU004a_59e6b6a5cf73c090318db5e36abb1889, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_59e6b6a5cf73c090318db5e36abb1889, putative proteorhodopsin gene, partial cds. KJ926967 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTAATTACTGTGCCGCTACTCATGGTTGAATTCTACCTAATCCTTCGGGCAGTTACGGCTGTATCAGGCGGCATTTTTTGGCGTCTGATGATCGGCACTCTAGTCATGCTTGTCGGCGGATACGCTGGTGAGGTTGGCTATATTGGTGCATGGGCAGGCTTTATTATCGGTATGGTCGGTTGGGCGTATATCCTGTATGAAATCTTTGCAGGCGAAGCTAGCCGTGTTGCATCTGAAAAGGCATCTCCAGCAGTACAGTCGGCCTTTTCAACTATGCGTTGGATTGTATCTATT LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTGCCGCTACTCATGGTTGAATTCTACCTAATCCTTCGGGCA---------GTT---ACGGCTGTATCAGGC---GGCATT------------------------------------TTTTGGCGT---CTGATGATCGGCACTCTAGTCATGCTTGTCGGCGGATACGCTGGTGAG---------GTT------------------GGC------TAT---------------------------------ATT------------------------------------------------------------------GGTGCA------------------TGGGCAGGC---TTTATTATCGGTATGGTCGGTTGGGCGTATATCCTGTATGAAATC---------------TTT------GCA---GGCGAAGCTAGCCGTGTTGCATCTGAA------AAG---GCATCTCCAGCAGTA---CAG---TCG---GCC---TTT---TCA---ACTATG---CGTTGGATTGTATCTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926991 [III-Alpha3-a] PRGD_OTU004a_94f9eb1690de4266fdcec2ccc12742c6 gb|KJ926991| PRGD_OTU004a_94f9eb1690de4266fdcec2ccc12742c6, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_94f9eb1690de4266fdcec2ccc12742c6, putative proteorhodopsin gene, partial cds. KJ926991 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACCTAATCCTTCGGGCAGTCACGGCTGTATCAGGCGGCATTTTTTGGCGTCTGATGATCGGCACTCTAGTCATGCTTGTCGGCGGCTACGCTGGTGAGGTTGGCTATATTGGCGCATGGGCAGGCTTTATTATCGGCATGGTCGGTTGGGCTTATATTCTGTATGAAATCTTTGCAGGCGAAGCAAGCCGTGTTGCATCTGAAAAGGCATCTCCAGCAGTACAGTCAGCCTTTTCAACTATGCGTTGGATTGTATCTATC LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACCTAATCCTTCGGGCA---------GTC---ACGGCTGTATCAGGC---GGCATT------------------------------------TTTTGGCGT---CTGATGATCGGCACTCTAGTCATGCTTGTCGGCGGCTACGCTGGTGAG---------GTT------------------GGC------TAT---------------------------------ATT------------------------------------------------------------------GGCGCA------------------TGGGCAGGC---TTTATTATCGGCATGGTCGGTTGGGCTTATATTCTGTATGAAATC---------------TTT------GCA---GGCGAAGCAAGCCGTGTTGCATCTGAA------AAG---GCATCTCCAGCAGTA---CAG---TCA---GCC---TTT---TCA---ACTATG---CGTTGGATTGTATCTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ927031 [III-Alpha3-a] PRGD_OTU004a_efd8a1c3619599c09e9ee38a3492a02c gb|KJ927031| PRGD_OTU004a_efd8a1c3619599c09e9ee38a3492a02c, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_efd8a1c3619599c09e9ee38a3492a02c, putative proteorhodopsin gene, partial cds. KJ927031 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTGATTACTGTGCCGCTACTTATGGTTGAATTCTACCTAATCCTTCGGGCAGTCACGGCTGTATCAGGCGGCATTTTTTGGCGTCTGATGATCGGCACTCTAGTCATGCTTGTCGGCGGCTACGCTGGTGAGGTTGGCTATATTGGTGCATGGGCAGGCTTTATTATCGGCATGGTCGGTTGGGCTTATATTCTGTATGAAATCTTTGCAGGCGAAGCAAGCCGTGTTGCATCTGAAAAGGCATCTCCAGCAGTACAGTCAGCCTTTTCAACCATGCGCTGGATTGTATCTATC LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTGCCGCTACTTATGGTTGAATTCTACCTAATCCTTCGGGCA---------GTC---ACGGCTGTATCAGGC---GGCATT------------------------------------TTTTGGCGT---CTGATGATCGGCACTCTAGTCATGCTTGTCGGCGGCTACGCTGGTGAG---------GTT------------------GGC------TAT---------------------------------ATT------------------------------------------------------------------GGTGCA------------------TGGGCAGGC---TTTATTATCGGCATGGTCGGTTGGGCTTATATTCTGTATGAAATC---------------TTT------GCA---GGCGAAGCAAGCCGTGTTGCATCTGAA------AAG---GCATCTCCAGCAGTA---CAG---TCA---GCC---TTT---TCA---ACCATG---CGCTGGATTGTATCTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926944 [III-Alpha3-a] PRGD_OTU004a_2b2d506242487809f50c6b0a7582b326 gb|KJ926944| PRGD_OTU004a_2b2d506242487809f50c6b0a7582b326, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_2b2d506242487809f50c6b0a7582b326, putative proteorhodopsin gene, partial cds. KJ926944 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) CTGATTACTGTGCCGCTACTTATGGTTGAATTCTACCTAATCCTTCGGGCAGTCACGGCTGTATCGGGCGGCATTTTTTGGCGTCTGATGATCGGCACACTAGTTATGCTTGTCGGCGGCTACGCCGGTGAGGTTGGCTATATCGGTGCATGGGCAGGCTTTATTATCGGCATGGTCGGTTGGGCTTACATTCTGTATGAAATCTTTGCGGGCGAAGCAAGCCGCGTTGCGTCTGAAAAGGCTTCTCCAGCGGTGCAGTCAGCCTTTTCGACTATGCGTTGGATTGTATCTATC LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTGCCGCTACTTATGGTTGAATTCTACCTAATCCTTCGGGCA---------GTC---ACGGCTGTATCGGGC---GGCATT------------------------------------TTTTGGCGT---CTGATGATCGGCACACTAGTTATGCTTGTCGGCGGCTACGCCGGTGAG---------GTT------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------GGTGCA------------------TGGGCAGGC---TTTATTATCGGCATGGTCGGTTGGGCTTACATTCTGTATGAAATC---------------TTT------GCG---GGCGAAGCAAGCCGCGTTGCGTCTGAA------AAG---GCTTCTCCAGCGGTG---CAG---TCA---GCC---TTT---TCG---ACTATG---CGTTGGATTGTATCTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926972 [III-Alpha3-a] PRGD_OTU004a_6478f7620927a9f29f0a670febe0cdf8 gb|KJ926972| PRGD_OTU004a_6478f7620927a9f29f0a670febe0cdf8, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_6478f7620927a9f29f0a670febe0cdf8, putative proteorhodopsin gene, partial cds. KJ926972 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) CTGATCACTGTGCCGCTACTCATGGTTGAATTCTACCTAATCCTTCGGGCAGTCACGGCTGTCTCAGGCGGTATTTTTTGGCGTTTGATGATTGGTACACTAGTCATGCTTGTTGGCGGTTACGCTGGTGAGGTCAAATATATTGATCCATGGATAGGCTTTGCTATCGGCATGGCCGGTTGGGCTTACATTCTGTATGAAATCTTTGCAGGTGAAGCTAGCCGTGTTGCATCTGAAAAAGCATCCCCAGCAGTTCAGTCAGCTTTTTCAACAATGCGTTGGATTGTATCTATT LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVKYIDPWIGFAIGMAGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTGCCGCTACTCATGGTTGAATTCTACCTAATCCTTCGGGCA---------GTC---ACGGCTGTCTCAGGC---GGTATT------------------------------------TTTTGGCGT---TTGATGATTGGTACACTAGTCATGCTTGTTGGCGGTTACGCTGGTGAG---------GTC------------------AAA------TAT---------------------------------ATT------------------------------------------------------------------GATCCA------------------TGGATAGGC---TTTGCTATCGGCATGGCCGGTTGGGCTTACATTCTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGCCGTGTTGCATCTGAA------AAA---GCATCCCCAGCAGTT---CAG---TCA---GCT---TTT---TCA---ACAATG---CGTTGGATTGTATCTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------K--Y-----------I----------------------DP------WIG-FAIGMAGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ927025 [III-Alpha3-a] PRGD_OTU004a_e05b3b377ff00b518aaa6b62e110d428 gb|KJ927025| PRGD_OTU004a_e05b3b377ff00b518aaa6b62e110d428, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_e05b3b377ff00b518aaa6b62e110d428, putative proteorhodopsin gene, partial cds. KJ927025 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683) CTGATCACTGTGCCGCTACTCATGGTTGAATTCTACCTAATCCTTCGGGCAGTCACGGCTGTCTCAGGCGGTATTTTTTGGCGTTTGATGATTGGTACACTAGTCATGCTTGTTGGCGGTTACGCTGGTGAGGTCAAATATATTGATCCATGGATAGGCTTTGCTATCGGCATGGCCGGTTGGGCTTACATTCTGTATGAAATCTTTGCAGGTGAAGCTAGCCGTGTTGCATCTGAAAAGGCATCTCCGGCAGTACAGTCAGCCTTTTCAACCATGCGTTGGATTGTATCCATC LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVKYIDPWIGFAIGMAGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTGCCGCTACTCATGGTTGAATTCTACCTAATCCTTCGGGCA---------GTC---ACGGCTGTCTCAGGC---GGTATT------------------------------------TTTTGGCGT---TTGATGATTGGTACACTAGTCATGCTTGTTGGCGGTTACGCTGGTGAG---------GTC------------------AAA------TAT---------------------------------ATT------------------------------------------------------------------GATCCA------------------TGGATAGGC---TTTGCTATCGGCATGGCCGGTTGGGCTTACATTCTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGCCGTGTTGCATCTGAA------AAG---GCATCTCCGGCAGTA---CAG---TCA---GCC---TTT---TCA---ACCATG---CGTTGGATTGTATCCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------K--Y-----------I----------------------DP------WIG-FAIGMAGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926990 [III-Alpha3-a] PRGD_OTU004a_943ace391fd5503c5a62cecd636cd118 gb|KJ926990| PRGD_OTU004a_943ace391fd5503c5a62cecd636cd118, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_943ace391fd5503c5a62cecd636cd118, putative proteorhodopsin gene, partial cds. KJ926990 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683) CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACCTGATCCTTCGGGCAGTCACAGCTGTATCAGGCGGCATTTTTTGGCGTCTGATGATTGGCACTCTAGTCATGCTTGTTGGCGGTTACGCTGGTGAGGTCGGCTACATCGGTGCATGGGCAGGCTTTATTATCGGCATGGTCGGTTGGGCGTACATTCTGTATGAAATCTTTGCAGGCGAAGCAAGCCGTGTTGCATCTGAAAAGGCATCTCCAGCAGTACAGTCAGCCTTTTCAACCATGCGTTGGATTGTATCTATC LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACCTGATCCTTCGGGCA---------GTC---ACAGCTGTATCAGGC---GGCATT------------------------------------TTTTGGCGT---CTGATGATTGGCACTCTAGTCATGCTTGTTGGCGGTTACGCTGGTGAG---------GTC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------GGTGCA------------------TGGGCAGGC---TTTATTATCGGCATGGTCGGTTGGGCGTACATTCTGTATGAAATC---------------TTT------GCA---GGCGAAGCAAGCCGTGTTGCATCTGAA------AAG---GCATCTCCAGCAGTA---CAG---TCA---GCC---TTT---TCA---ACCATG---CGTTGGATTGTATCTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926926 [III-Alpha3-a] PRGD_OTU004a_103d597edf4b0dd5b20ea86c585459c2 gb|KJ926926| PRGD_OTU004a_103d597edf4b0dd5b20ea86c585459c2, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_103d597edf4b0dd5b20ea86c585459c2, putative proteorhodopsin gene, partial cds. KJ926926 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACCTAATCCTTCGGGCAGTCACGGCTGTATCAGGCGGCATTTTTTGGCGTCTAATGATCGGTACACTAGTCATGCTTTTCGGCGGTTATGCTGGCGAGGTCGGCTACATCAGTGCTTGGGCAGGCTTTATTATCGGCATGGTCGGTTGGGCTTACATTCTGTATGAAATCTTTGCAGGCGAAGCTAGCCGTGTTGCATCTGAAAAGGCATCTCCAGCAGTACAGTCAGCCTTTTCAACTATGCGTTGGATTGTATCTATC LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLFGGYAGEVGYISAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACCTAATCCTTCGGGCA---------GTC---ACGGCTGTATCAGGC---GGCATT------------------------------------TTTTGGCGT---CTAATGATCGGTACACTAGTCATGCTTTTCGGCGGTTATGCTGGCGAG---------GTC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGTGCT------------------TGGGCAGGC---TTTATTATCGGCATGGTCGGTTGGGCTTACATTCTGTATGAAATC---------------TTT------GCA---GGCGAAGCTAGCCGTGTTGCATCTGAA------AAG---GCATCTCCAGCAGTA---CAG---TCA---GCC---TTT---TCA---ACTATG---CGTTGGATTGTATCTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLFGGYAGE---V------G--Y-----------I----------------------SA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926946 [III-Alpha3-a] PRGD_OTU004a_2f3dfed6a90a876d31ffca7e93796288 gb|KJ926946| PRGD_OTU004a_2f3dfed6a90a876d31ffca7e93796288, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_2f3dfed6a90a876d31ffca7e93796288, putative proteorhodopsin gene, partial cds. KJ926946 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACCTAATCCTTCGGGCAGTCACGGCTGTATCAGGCGGCATTTTTTGGCGTCTAATGATCGGTACACTAGTAATGCTTTTCGGCGGTTACGCTGGCGAGGTCGGCTACATCAGTGCTTGGGCAGGCTTTATTATCGGCATGGTCGGTTGGGCTTACATTTTGTATGAAATCTTTGCAGGCGAAGCTAGCCGTGTTGCATCTGAAAAGGCATCTCCAGCAGTACAGTCAGCCTTTTCAACTATGCGTTGGATTGTATCTATC LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLFGGYAGEVGYISAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACCTAATCCTTCGGGCA---------GTC---ACGGCTGTATCAGGC---GGCATT------------------------------------TTTTGGCGT---CTAATGATCGGTACACTAGTAATGCTTTTCGGCGGTTACGCTGGCGAG---------GTC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGTGCT------------------TGGGCAGGC---TTTATTATCGGCATGGTCGGTTGGGCTTACATTTTGTATGAAATC---------------TTT------GCA---GGCGAAGCTAGCCGTGTTGCATCTGAA------AAG---GCATCTCCAGCAGTA---CAG---TCA---GCC---TTT---TCA---ACTATG---CGTTGGATTGTATCTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLFGGYAGE---V------G--Y-----------I----------------------SA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ927036 [III-Alpha3-a] PRGD_OTU004a_fac7f64d2ec0eaec05bafcd64de7425c gb|KJ927036| PRGD_OTU004a_fac7f64d2ec0eaec05bafcd64de7425c, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_fac7f64d2ec0eaec05bafcd64de7425c, putative proteorhodopsin gene, partial cds. KJ927036 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833) CTGATTACTGTGCCGCTGCTCATGGTTGAGTTCTACCTGATCCTTCGGGCAGTCACAGCTGTATCAGGCGGCATTTTTTGGCGTCTAATGATTGGCACACTAGTCATGCTTGTTGGCGGTTACGCTGGTGAGGTCGGCTACATCAGTGCATGGGCAGGCTTTATTATCGGCATGGTCGGTTGGGCTTACATTCTGTATGAAATCTTTGCAGGCGAAGCTAGCCGTGTTGCATCTGAAAAGGCATCTCCAGCAGTACAGTCAGCCTTTTCAACTATGCGATGGATTGTATCTATC LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYISAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTGCCGCTGCTCATGGTTGAGTTCTACCTGATCCTTCGGGCA---------GTC---ACAGCTGTATCAGGC---GGCATT------------------------------------TTTTGGCGT---CTAATGATTGGCACACTAGTCATGCTTGTTGGCGGTTACGCTGGTGAG---------GTC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGTGCA------------------TGGGCAGGC---TTTATTATCGGCATGGTCGGTTGGGCTTACATTCTGTATGAAATC---------------TTT------GCA---GGCGAAGCTAGCCGTGTTGCATCTGAA------AAG---GCATCTCCAGCAGTA---CAG---TCA---GCC---TTT---TCA---ACTATG---CGATGGATTGTATCTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------SA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926938 [III-Alpha3-a] PRGD_OTU004a_20d1b316dc80dbd3970ecc91b1d9cab8 gb|KJ926938| PRGD_OTU004a_20d1b316dc80dbd3970ecc91b1d9cab8, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_20d1b316dc80dbd3970ecc91b1d9cab8, putative proteorhodopsin gene, partial cds. KJ926938 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833) CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACCTGATCCTTCGGGCAGTCACAGCTGTATCAGGCGGCATTTTTTGGCGTCTGATGATTGGCACACTAGTCATGCTTGTTGGCGGTTATGCTGGTGAGGTCGGCTACATCAGTGCATGGGCAGGCTTTATTATCGGCATGGTCGGTTGGGCTTACATTCTGTATGAAATCTTTGCAGGCGAAGCTAGCCGTGTTGCATCTGAAAAGGCATCTCCAGCAGTACAGTCAGCCTTTTCAACTATGCGATGGATTGTATCTATT LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYISAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACCTGATCCTTCGGGCA---------GTC---ACAGCTGTATCAGGC---GGCATT------------------------------------TTTTGGCGT---CTGATGATTGGCACACTAGTCATGCTTGTTGGCGGTTATGCTGGTGAG---------GTC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGTGCA------------------TGGGCAGGC---TTTATTATCGGCATGGTCGGTTGGGCTTACATTCTGTATGAAATC---------------TTT------GCA---GGCGAAGCTAGCCGTGTTGCATCTGAA------AAG---GCATCTCCAGCAGTA---CAG---TCA---GCC---TTT---TCA---ACTATG---CGATGGATTGTATCTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------SA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926957 [III-Alpha3-a] PRGD_OTU004a_4b78caf78ae742176bb3d8f5fd787352 gb|KJ926957| PRGD_OTU004a_4b78caf78ae742176bb3d8f5fd787352, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_4b78caf78ae742176bb3d8f5fd787352, putative proteorhodopsin gene, partial cds. KJ926957 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACTTGATCCTTCGGGCGGTCACAGCTGTATCAGGCGGCATTTTTTGGCGTCTGATGATTGGCACACTAGTCATGCTTGTTGGCGGCTACGCTGGTGAGGTCGGCTACATCGGTGCATGGGCGGGCTTTATTATCGGCATGGTCGGTTGGGCATACATTCTGTATGAAATCTTTGCCGGCGAAGCTAGCCGTGTTGCATCTGAAAAGGCATCCCCAGCAGTACAGTCAGCCTTTTCAACTATGCGTTGGATTGTATCTATC LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACTTGATCCTTCGGGCG---------GTC---ACAGCTGTATCAGGC---GGCATT------------------------------------TTTTGGCGT---CTGATGATTGGCACACTAGTCATGCTTGTTGGCGGCTACGCTGGTGAG---------GTC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------GGTGCA------------------TGGGCGGGC---TTTATTATCGGCATGGTCGGTTGGGCATACATTCTGTATGAAATC---------------TTT------GCC---GGCGAAGCTAGCCGTGTTGCATCTGAA------AAG---GCATCCCCAGCAGTA---CAG---TCA---GCC---TTT---TCA---ACTATG---CGTTGGATTGTATCTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ927015 [III-Alpha3-a] PRGD_OTU004a_cbc8a7839c3ed23239a083cce1908b91 gb|KJ927015| PRGD_OTU004a_cbc8a7839c3ed23239a083cce1908b91, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_cbc8a7839c3ed23239a083cce1908b91, putative proteorhodopsin gene, partial cds. KJ927015 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683) CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACCTGATCCTTCGGGCGGTCACAGCTGTATCAGGCGGCATTTTTTGGCGTCTGATGATTGGCACTCTGGTCATGCTTGTTGGCGGTTACGCTGGTGAGGTCGGTTACATCGGCGCATGGGCAGGCTTTATTATCGGCATGGTCGGCTGGGCATACATTCTGTATGAAATCTTTGCAGGCGAAGCTAGCCGTGTTGCATCTGAAAAGGCATCTCCAGCAGTACAGTCAGCCTTTTCAACTATGCGTTGGATCGTATCTATC LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACCTGATCCTTCGGGCG---------GTC---ACAGCTGTATCAGGC---GGCATT------------------------------------TTTTGGCGT---CTGATGATTGGCACTCTGGTCATGCTTGTTGGCGGTTACGCTGGTGAG---------GTC------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------GGCGCA------------------TGGGCAGGC---TTTATTATCGGCATGGTCGGCTGGGCATACATTCTGTATGAAATC---------------TTT------GCA---GGCGAAGCTAGCCGTGTTGCATCTGAA------AAG---GCATCTCCAGCAGTA---CAG---TCA---GCC---TTT---TCA---ACTATG---CGTTGGATCGTATCTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926978 [III-Alpha3-a] PRGD_OTU004a_747d37bbb46595f534f1703561f7427d gb|KJ926978| PRGD_OTU004a_747d37bbb46595f534f1703561f7427d, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_747d37bbb46595f534f1703561f7427d, putative proteorhodopsin gene, partial cds. KJ926978 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATTACTGTGCCGCTACTCATGGTTGAGTTTTACCTGATCCTTCGGGCGGTCACAGCTGTATCAGGCGGCATTTTTTGGCGGCTGATGATTGGCACACTAGTCATGCTTGTCGGCGGTTACGCTGGTGAGGTCGGCTACATCGGTGCATGGGCAGGATTTATTATCGGCATGGTCGGTTGGGCATACATTCTGTATGAAATCTTTGCAGGCGAAGCTAGCCGTGTTGCATCTGAAAAGGCATCTCCAGCAGTACAGTCAGCCTTTTCAACTATGCGTTGGATTGTATCTATC LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTGCCGCTACTCATGGTTGAGTTTTACCTGATCCTTCGGGCG---------GTC---ACAGCTGTATCAGGC---GGCATT------------------------------------TTTTGGCGG---CTGATGATTGGCACACTAGTCATGCTTGTCGGCGGTTACGCTGGTGAG---------GTC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------GGTGCA------------------TGGGCAGGA---TTTATTATCGGCATGGTCGGTTGGGCATACATTCTGTATGAAATC---------------TTT------GCA---GGCGAAGCTAGCCGTGTTGCATCTGAA------AAG---GCATCTCCAGCAGTA---CAG---TCA---GCC---TTT---TCA---ACTATG---CGTTGGATTGTATCTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926958 [III-Alpha3-a] PRGD_OTU004a_4eb3e68556287b6245424d1b677ef951 gb|KJ926958| PRGD_OTU004a_4eb3e68556287b6245424d1b677ef951, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_4eb3e68556287b6245424d1b677ef951, putative proteorhodopsin gene, partial cds. KJ926958 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683) CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACCTGATCCTTCGGGCGGTCACAGCTGTATCAGGCGGCATTTTTTGGCGTCTGATGATTGGCACGCTAGTCATGCTTGTTGGCGGTTACGCTGGTGAGGTCGGCTACATCGGTGCATGGGCAGGCTTTATTATCGGCATGGTCGGTTGGGCATACATTCTGTATGAAATCTTTGCAGGTGAAGCTAGCCGTGTTGCATCTGAAAAGGCATCTCCAGCAGTACAGTCAGCCTTTTCAACTATGCGTTGGATTGTATCTATC LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACCTGATCCTTCGGGCG---------GTC---ACAGCTGTATCAGGC---GGCATT------------------------------------TTTTGGCGT---CTGATGATTGGCACGCTAGTCATGCTTGTTGGCGGTTACGCTGGTGAG---------GTC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------GGTGCA------------------TGGGCAGGC---TTTATTATCGGCATGGTCGGTTGGGCATACATTCTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGCCGTGTTGCATCTGAA------AAG---GCATCTCCAGCAGTA---CAG---TCA---GCC---TTT---TCA---ACTATG---CGTTGGATTGTATCTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926951 [III-Alpha3-a] PRGD_OTU004a_3e3cef51d0a3881990c1c9ff4ba5376a gb|KJ926951| PRGD_OTU004a_3e3cef51d0a3881990c1c9ff4ba5376a, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_3e3cef51d0a3881990c1c9ff4ba5376a, putative proteorhodopsin gene, partial cds. KJ926951 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683) CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACCTGATCCTTCGGGCGGTCACAGCTGTATCAGGCGGCATTTTTTGGCGCCTGATGATTGGCACACTAGTCATGCTTGTTGGTGGTTACGCTGGTGAAGTTGGCTACATCGGTGCATGGGCAGGCTTTATTATCGGCATGGTCGGTTGGGCATACATTCTGTATGAAATCTTTGCAGGTGAAGCTAGCCGTGTTGCATCTGAAAAGGCATCTCCAGCAGTACAGTCAGCCTTTTCAACCATGCGTTGGATTGTATCTATC LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACCTGATCCTTCGGGCG---------GTC---ACAGCTGTATCAGGC---GGCATT------------------------------------TTTTGGCGC---CTGATGATTGGCACACTAGTCATGCTTGTTGGTGGTTACGCTGGTGAA---------GTT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------GGTGCA------------------TGGGCAGGC---TTTATTATCGGCATGGTCGGTTGGGCATACATTCTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGCCGTGTTGCATCTGAA------AAG---GCATCTCCAGCAGTA---CAG---TCA---GCC---TTT---TCA---ACCATG---CGTTGGATTGTATCTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926989 [III-Alpha3-a] PRGD_OTU004a_8d36ccff5457192151b20f6b9e9a313d gb|KJ926989| PRGD_OTU004a_8d36ccff5457192151b20f6b9e9a313d, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_8d36ccff5457192151b20f6b9e9a313d, putative proteorhodopsin gene, partial cds. KJ926989 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) CTGATTACTGTGCCGCTTCTCATGGTTGAATTCTACCTGATCCTTCGGGCAGTCACAGCAGTATCAGGCGGCATTTTTTGGCGTCTGATGATTGGCACACTAGTCATGCTTGTTGGCGGTTACGCTGGCGAGGTCGGCTACATCGGAGCATGGGCAGGCTTTATTATCGGCATGGTCGGTTGGGCATACATTCTGTATGAAATCTTTGCAGGTGAAGCTAGCCGTGTTGCATCTGAAAAGGCATCTCCAGCAGTACAGTCAGCCTTTTCAACTATGCGTTGGATTGTATCTATC LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTGCCGCTTCTCATGGTTGAATTCTACCTGATCCTTCGGGCA---------GTC---ACAGCAGTATCAGGC---GGCATT------------------------------------TTTTGGCGT---CTGATGATTGGCACACTAGTCATGCTTGTTGGCGGTTACGCTGGCGAG---------GTC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------GGAGCA------------------TGGGCAGGC---TTTATTATCGGCATGGTCGGTTGGGCATACATTCTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGCCGTGTTGCATCTGAA------AAG---GCATCTCCAGCAGTA---CAG---TCA---GCC---TTT---TCA---ACTATG---CGTTGGATTGTATCTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926924 [III-Alpha3-a] PRGD_OTU004a_06202c11fa4b8bb225a38c3dfb8ebc0f gb|KJ926924| PRGD_OTU004a_06202c11fa4b8bb225a38c3dfb8ebc0f, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_06202c11fa4b8bb225a38c3dfb8ebc0f, putative proteorhodopsin gene, partial cds. KJ926924 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACCTGATTCTTCGGGCAGTCACAGCTGTATCAGGCGGCATTTTTTGGCGTCTGATGATTGGCACATTAGTCATGCTTGTTGGCGGTTACGCTGGTGAGGTCGGCTACATCGGTGCATGGGCAGGCTTTATCATCGGCATGGTCGGTTGGGCTTACATTCTGTATGAAATCTTTGCAGGTGAAGCTAGTCGTGTTGCCTCTGAAAAGGCATCGCCAGCCGTGCAGTCAGCCTTTTCGACTATGCGTTGGATTGTATCTATA LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACCTGATTCTTCGGGCA---------GTC---ACAGCTGTATCAGGC---GGCATT------------------------------------TTTTGGCGT---CTGATGATTGGCACATTAGTCATGCTTGTTGGCGGTTACGCTGGTGAG---------GTC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------GGTGCA------------------TGGGCAGGC---TTTATCATCGGCATGGTCGGTTGGGCTTACATTCTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGTCGTGTTGCCTCTGAA------AAG---GCATCGCCAGCCGTG---CAG---TCA---GCC---TTT---TCG---ACTATG---CGTTGGATTGTATCTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ927021 [III-Alpha3-a] PRGD_OTU004a_d1e32f0ebcd24a3da04188938e3119df gb|KJ927021| PRGD_OTU004a_d1e32f0ebcd24a3da04188938e3119df, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_d1e32f0ebcd24a3da04188938e3119df, putative proteorhodopsin gene, partial cds. KJ927021 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACCTGATTCTTCGGGCAGTCACAGCTGTATCAGGCGGCATTTTTTGGCGTCTGATGATTGGCACACTAGTCATGCTTGTTGGCGGTTACGCTGGTGAAGTCGGCTACATCGGTGCATGGGCAGGCTTTATCATCGGCATGGTCGGTTGGGCTTACATTCTGTATGAAATCTTTGCAGGTGAAGCTAGTCGTGTTGCATCTGAAAAGGCATCTCCAGCCGTGCAGTCAGCCTTTTCGACTATGCGTTGGATTGTATCTATC LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACCTGATTCTTCGGGCA---------GTC---ACAGCTGTATCAGGC---GGCATT------------------------------------TTTTGGCGT---CTGATGATTGGCACACTAGTCATGCTTGTTGGCGGTTACGCTGGTGAA---------GTC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------GGTGCA------------------TGGGCAGGC---TTTATCATCGGCATGGTCGGTTGGGCTTACATTCTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGTCGTGTTGCATCTGAA------AAG---GCATCTCCAGCCGTG---CAG---TCA---GCC---TTT---TCG---ACTATG---CGTTGGATTGTATCTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ927018 [III-Alpha3-a] PRGD_OTU004a_ce357ce067995ef863a01c8010353db2 gb|KJ927018| PRGD_OTU004a_ce357ce067995ef863a01c8010353db2, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_ce357ce067995ef863a01c8010353db2, putative proteorhodopsin gene, partial cds. KJ927018 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACCTAATCCTTCGGGCAGTCACAGCTGTGTCAGGCGGCATTTTCTGGCGCCTGATGATTGGCACACTGGTCATGCTTGTCGGCGGTTACGCTGGTGAGGTCGGCTACATCAGTGCATGGGCAGGCTTTATTATCGGCATGGTCGGTTGGGCGTACATTCTGTATGAAATCTTTGCAGGTGAAGCTAGCCGTGTTGCATCTGAAAAGGCATCTCCAGCAGTGCAGTCAGCTTTTTCAACTATGCGTTGGATTGTGTCTATT LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYISAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACCTAATCCTTCGGGCA---------GTC---ACAGCTGTGTCAGGC---GGCATT------------------------------------TTCTGGCGC---CTGATGATTGGCACACTGGTCATGCTTGTCGGCGGTTACGCTGGTGAG---------GTC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGTGCA------------------TGGGCAGGC---TTTATTATCGGCATGGTCGGTTGGGCGTACATTCTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGCCGTGTTGCATCTGAA------AAG---GCATCTCCAGCAGTG---CAG---TCA---GCT---TTT---TCA---ACTATG---CGTTGGATTGTGTCTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------SA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ927026 [III-Alpha3-a] PRGD_OTU004a_e07150819fb3b9264d69aa0976425c9e gb|KJ927026| PRGD_OTU004a_e07150819fb3b9264d69aa0976425c9e, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_e07150819fb3b9264d69aa0976425c9e, putative proteorhodopsin gene, partial cds. KJ927026 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097), English Channel (48.7717, -3.9683) CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACCTAATCCTTCGGGCAGTCACAGCTGTGTCAGGCGGCATTTTCTGGCGCCTGATGATTGGCACACTGGTCATGCTTGTTGGCGGTTACGCTGGTGAGGTCGGCTACATCGGTGCATGGGCAGGCTTTATTATCGGCATGGTCGGTTGGGCGTACATTCTGTATGAAATCTTTGCAGGTGAAGCTAGCCGTGTTGCATCTGAAAAGGCATCTCCAGCAGTGCAGTCAGCTTTTTCAACTATGCGTTGGATTGTGTCTATT LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACCTAATCCTTCGGGCA---------GTC---ACAGCTGTGTCAGGC---GGCATT------------------------------------TTCTGGCGC---CTGATGATTGGCACACTGGTCATGCTTGTTGGCGGTTACGCTGGTGAG---------GTC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------GGTGCA------------------TGGGCAGGC---TTTATTATCGGCATGGTCGGTTGGGCGTACATTCTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGCCGTGTTGCATCTGAA------AAG---GCATCTCCAGCAGTG---CAG---TCA---GCT---TTT---TCA---ACTATG---CGTTGGATTGTGTCTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926962 [III-Alpha3-a] PRGD_OTU004a_53dfa5269d08dfb0d9b505efe8591a78 gb|KJ926962| PRGD_OTU004a_53dfa5269d08dfb0d9b505efe8591a78, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_53dfa5269d08dfb0d9b505efe8591a78, putative proteorhodopsin gene, partial cds. KJ926962 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (72.0542, -130.8781; ; 67.49, -168.12), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACCTAATCCTTCGGGCAGTCACAGCTGTGTCAGGCGGCATTTTCTGGCGTCTGATGATTGGCACACTGGTCATGCTTGTCGGCGGTTACGCTGGTGAGGTCGGCTACATCGGTGTATGGGCAGGCTTTATTATCGGCATGGTCGGTTGGGCGTACATTCTGTATGAAATCTTTGCAGGCGAAGCTAGCCGTGTTGCATCTGAAAAGGCATCTCCAGCAGTGCAGTCAGCTTTTTCAACTATGCGTTGGATTGTGTCTGTT LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGVWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTGCCGCTACTCATGGTTGAATTCTACCTAATCCTTCGGGCA---------GTC---ACAGCTGTGTCAGGC---GGCATT------------------------------------TTCTGGCGT---CTGATGATTGGCACACTGGTCATGCTTGTCGGCGGTTACGCTGGTGAG---------GTC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------GGTGTA------------------TGGGCAGGC---TTTATTATCGGCATGGTCGGTTGGGCGTACATTCTGTATGAAATC---------------TTT------GCA---GGCGAAGCTAGCCGTGTTGCATCTGAA------AAG---GCATCTCCAGCAGTG---CAG---TCA---GCT---TTT---TCA---ACTATG---CGTTGGATTGTGTCTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GV------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSV-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926984 [III-Alpha3-a] PRGD_OTU004a_8028fe5c822b001f4dabf021f7d3f0b2 gb|KJ926984| PRGD_OTU004a_8028fe5c822b001f4dabf021f7d3f0b2, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_8028fe5c822b001f4dabf021f7d3f0b2, putative proteorhodopsin gene, partial cds. KJ926984 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833) CTGATCACTGTGCCACTACTCATGGTTGAATTCTATCTAATCCTACGGGCAGTCACAGCTGTATCAGGCGGCATTTTCTGGCGGCTGATGATCGGGACACTGGTCATGCTGGTCGGCGGTTACGCCGGTGAAGTTGGTTATATCAGTGCATGGGCCGGCTTCATTATTGGTATGGTCGGTTGGGCGTACATTCTGTACGAAATCTTTGCAGGCGAAGCCAGCCGTGTTGCATCTGAAAAGGCATCTCCAGCAGTACAGTCAGCTTTTTCAACTATGCGCTGGATTGTATCTATT LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYISAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTGCCACTACTCATGGTTGAATTCTATCTAATCCTACGGGCA---------GTC---ACAGCTGTATCAGGC---GGCATT------------------------------------TTCTGGCGG---CTGATGATCGGGACACTGGTCATGCTGGTCGGCGGTTACGCCGGTGAA---------GTT------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------AGTGCA------------------TGGGCCGGC---TTCATTATTGGTATGGTCGGTTGGGCGTACATTCTGTACGAAATC---------------TTT------GCA---GGCGAAGCCAGCCGTGTTGCATCTGAA------AAG---GCATCTCCAGCAGTA---CAG---TCA---GCT---TTT---TCA---ACTATG---CGCTGGATTGTATCTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------SA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ927007 [III-Alpha3-a] PRGD_OTU004a_c39b3dada1646d668a4a13a0b6665171 gb|KJ927007| PRGD_OTU004a_c39b3dada1646d668a4a13a0b6665171, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_c39b3dada1646d668a4a13a0b6665171, putative proteorhodopsin gene, partial cds. KJ927007 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTGATCACTGTGCCGCTACTCATGGTTGAATTTTACCTCATCCTGAGGGCAGTCACAGCTGTCTCAGGCGGCATTTTCTGGCGCCTGATGATAGGTACACTAGTCATGCTTGTCGGTGGTTATGCTGGTGAAGTCGGCTATATCGGTGCATGGGCAGGCTTTATTATTGGTATGGTCGGTTGGGCTTACATTCTGTACGAAATCTTTGCAGGCGAAGCCAGCCGTGTTGCCTCTGAAAAGGCATCTCCAGCAGTGCAGTCAGCCTTTTCAACCATGCGTTGGATTGTATCCATT LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTGCCGCTACTCATGGTTGAATTTTACCTCATCCTGAGGGCA---------GTC---ACAGCTGTCTCAGGC---GGCATT------------------------------------TTCTGGCGC---CTGATGATAGGTACACTAGTCATGCTTGTCGGTGGTTATGCTGGTGAA---------GTC------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------GGTGCA------------------TGGGCAGGC---TTTATTATTGGTATGGTCGGTTGGGCTTACATTCTGTACGAAATC---------------TTT------GCA---GGCGAAGCCAGCCGTGTTGCCTCTGAA------AAG---GCATCTCCAGCAGTG---CAG---TCA---GCC---TTT---TCA---ACCATG---CGTTGGATTGTATCCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ927035 [III-Alpha3-a] PRGD_OTU004a_f94056ade9395159702b8c1a3a6404a8 gb|KJ927035| PRGD_OTU004a_f94056ade9395159702b8c1a3a6404a8, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_f94056ade9395159702b8c1a3a6404a8, putative proteorhodopsin gene, partial cds. KJ927035 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATCACTGTACCGCTACTCATGGTTGAATTTTACCTAATCCTGAGGGCAGTCACAGCTGTCTCAGGCGGCATTTTCTGGCGCCTGATGATAGGTACACTAGTCATGCTTGTTGGTGGTTATGCTGGTGAAGTCGGCTATATCGGTGCATGGGCAGGCTTTATTATTGGTATGGTCGGTTGGGCTTACATTCTGTACGAAATCTTTGCAGGCGAAGCCAGCCGTGTTGCCTCTGAAAAGGCATCTCCGGCAGTACAGTCAGCCTTTTCAACCATGCGTTGGATTGTATCCATT LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTACCGCTACTCATGGTTGAATTTTACCTAATCCTGAGGGCA---------GTC---ACAGCTGTCTCAGGC---GGCATT------------------------------------TTCTGGCGC---CTGATGATAGGTACACTAGTCATGCTTGTTGGTGGTTATGCTGGTGAA---------GTC------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------GGTGCA------------------TGGGCAGGC---TTTATTATTGGTATGGTCGGTTGGGCTTACATTCTGTACGAAATC---------------TTT------GCA---GGCGAAGCCAGCCGTGTTGCCTCTGAA------AAG---GCATCTCCGGCAGTA---CAG---TCA---GCC---TTT---TCA---ACCATG---CGTTGGATTGTATCCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926939 [III-Alpha3-a] PRGD_OTU004a_23a45eb752959d5799fd35745b414a0f gb|KJ926939| PRGD_OTU004a_23a45eb752959d5799fd35745b414a0f, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_23a45eb752959d5799fd35745b414a0f, putative proteorhodopsin gene, partial cds. KJ926939 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATCACTGTGCCGCTACTCATGGTTGAATTTTACCTAATCCTGAGGGCAGTCACTGCTGTCTCAGGCGGCATTTTCTGGCGCCTGATGATAGGTACACTAGTCATGCTTGTTGGTGGTTATGCTGGTGAAGTCGGCTATATCGGTGCATGGGCAGGCTTTATTATTGGTATGGTCGGTTGGGCTTATATTCTGTACGAAATCTTTGCAGGCGAAGCCAGCCGTGTTGCCTCTGAAAAGGCATCTCCGGCAGTACAGTCAGCCTTTTCAACCATGCGTTGGATTGTATCCATT LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTGCCGCTACTCATGGTTGAATTTTACCTAATCCTGAGGGCA---------GTC---ACTGCTGTCTCAGGC---GGCATT------------------------------------TTCTGGCGC---CTGATGATAGGTACACTAGTCATGCTTGTTGGTGGTTATGCTGGTGAA---------GTC------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------GGTGCA------------------TGGGCAGGC---TTTATTATTGGTATGGTCGGTTGGGCTTATATTCTGTACGAAATC---------------TTT------GCA---GGCGAAGCCAGCCGTGTTGCCTCTGAA------AAG---GCATCTCCGGCAGTA---CAG---TCA---GCC---TTT---TCA---ACCATG---CGTTGGATTGTATCCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ927013 [III-Alpha3-a] PRGD_OTU004a_ca09b935ff52611d578ea9a0a5f5162d gb|KJ927013| PRGD_OTU004a_ca09b935ff52611d578ea9a0a5f5162d, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_ca09b935ff52611d578ea9a0a5f5162d, putative proteorhodopsin gene, partial cds. KJ927013 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTGATCACTGTGCCGCTACTCATGGTTGAATTTTACCTAATCCTGAGGGCAGTCACAGCTGTCTCAGGCGGCATTTTCTGGCGCCTGATGATAGGTACACTAGTCATGCTTGTTGGCGGTTATGCTGGTGAAGTCGGCTATATCGGTGCATGGGCAGGCTTTATTATTGGTATGGTCGGTTGGGCTTACATTCTGTACGAAATCTTTGCAGGCGAAGCCAGCCGTGTTGCCTCTGAAAAGGCATCTCCGGCAGTACAGTCAGCCTTTTCAACCATGCGTTGGATTGTATCCATT LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTGCCGCTACTCATGGTTGAATTTTACCTAATCCTGAGGGCA---------GTC---ACAGCTGTCTCAGGC---GGCATT------------------------------------TTCTGGCGC---CTGATGATAGGTACACTAGTCATGCTTGTTGGCGGTTATGCTGGTGAA---------GTC------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------GGTGCA------------------TGGGCAGGC---TTTATTATTGGTATGGTCGGTTGGGCTTACATTCTGTACGAAATC---------------TTT------GCA---GGCGAAGCCAGCCGTGTTGCCTCTGAA------AAG---GCATCTCCGGCAGTA---CAG---TCA---GCC---TTT---TCA---ACCATG---CGTTGGATTGTATCCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926976 [III-Alpha3-a] PRGD_OTU004a_6bad3293d33dc6f55b89198c7fa260f5 gb|KJ926976| PRGD_OTU004a_6bad3293d33dc6f55b89198c7fa260f5, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_6bad3293d33dc6f55b89198c7fa260f5, putative proteorhodopsin gene, partial cds. KJ926976 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATCACTGTGCCGCTACTCATGGTTGAATTTTACCTAATCCTAAGAGCAGTCACGGCTGTCTCGGGCGGCATATTCTGGCGTCTGATGATAGGTACACTAGTCATGCTTGTTGGCGGTTATGCTGGTGAAGTCGGCTATATCGGTGCCTGGGCAGGCTTTATTATTGGTATGGTCGGTTGGGCTTATATTCTGTACGAAATCTTTGCAGGAGAGGCCAGCCGTGTTGCATCTGAAAAGGCATCTCCGGCAGTACAGTCAGCCTTTTCAACTATGCGTTGGATTGTATCCATT LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTGCCGCTACTCATGGTTGAATTTTACCTAATCCTAAGAGCA---------GTC---ACGGCTGTCTCGGGC---GGCATA------------------------------------TTCTGGCGT---CTGATGATAGGTACACTAGTCATGCTTGTTGGCGGTTATGCTGGTGAA---------GTC------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------GGTGCC------------------TGGGCAGGC---TTTATTATTGGTATGGTCGGTTGGGCTTATATTCTGTACGAAATC---------------TTT------GCA---GGAGAGGCCAGCCGTGTTGCATCTGAA------AAG---GCATCTCCGGCAGTA---CAG---TCA---GCC---TTT---TCA---ACTATG---CGTTGGATTGTATCCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926943 [III-Alpha3-a] PRGD_OTU004a_297cd671f37178bccfc24f4ea18f1503 gb|KJ926943| PRGD_OTU004a_297cd671f37178bccfc24f4ea18f1503, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_297cd671f37178bccfc24f4ea18f1503, putative proteorhodopsin gene, partial cds. KJ926943 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 01-juil-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683) CTGATCACTGTGCCGCTACTCATGGTTGAATTTTACCTAATCCTAAGAGCAGTCACGGCTGTCTCAGGCGGCATTTTCTGGCGTCTAATGATAGGTACACTAGTCATGCTTGTTGGTGGTTATGCTGGTGAAGTCGGCTACATCGGTGCGTGGGCAGGCTTTATTATTGGTATGGTCGGTTGGGCTTACATTCTGTACGAAATCTTTGCAGGTGAAGCCAGCCGTGTTGCATCTGAAAAGGCATCTCCGGCAGTACAGTCAGCCTTTTCAACTATGCGTTGGATTGTATCCATT LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTGCCGCTACTCATGGTTGAATTTTACCTAATCCTAAGAGCA---------GTC---ACGGCTGTCTCAGGC---GGCATT------------------------------------TTCTGGCGT---CTAATGATAGGTACACTAGTCATGCTTGTTGGTGGTTATGCTGGTGAA---------GTC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------GGTGCG------------------TGGGCAGGC---TTTATTATTGGTATGGTCGGTTGGGCTTACATTCTGTACGAAATC---------------TTT------GCA---GGTGAAGCCAGCCGTGTTGCATCTGAA------AAG---GCATCTCCGGCAGTA---CAG---TCA---GCC---TTT---TCA---ACTATG---CGTTGGATTGTATCCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926948 [III-Alpha3-a] PRGD_OTU004a_33df6014962be2c6f1e905ddb24cf6b3 gb|KJ926948| PRGD_OTU004a_33df6014962be2c6f1e905ddb24cf6b3, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_33df6014962be2c6f1e905ddb24cf6b3, putative proteorhodopsin gene, partial cds. KJ926948 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) CTGATCACTGTGCCGCTACTCATGGTTGAATTTTACCTAATCCTAAGGGCAGTCACAGCTGTCTCAGGTGGCATTTTCTGGCGTCTGATGATAGGTACACTAGTCATGCTTGTTGGTGGCTATGCTGGTGAAGTCGGCTACATCGGTGCCTGGGCAGGCTTTATTATTGGTATGGTCGGTTGGGCTTACATTCTGTACGAAATCTTTGCAGGCGAAGCCAGCCGTGTTGCTTCTGAAAAGGCATCCCCGGCAGTACAGTCAGCCTTTTCAACTATGCGTTGGATTGTATCCATT LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTGCCGCTACTCATGGTTGAATTTTACCTAATCCTAAGGGCA---------GTC---ACAGCTGTCTCAGGT---GGCATT------------------------------------TTCTGGCGT---CTGATGATAGGTACACTAGTCATGCTTGTTGGTGGCTATGCTGGTGAA---------GTC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------GGTGCC------------------TGGGCAGGC---TTTATTATTGGTATGGTCGGTTGGGCTTACATTCTGTACGAAATC---------------TTT------GCA---GGCGAAGCCAGCCGTGTTGCTTCTGAA------AAG---GCATCCCCGGCAGTA---CAG---TCA---GCC---TTT---TCA---ACTATG---CGTTGGATTGTATCCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926927 [III-Alpha3-a] PRGD_OTU004a_125ad104dd934bf3e1bd1864d7b2b81a gb|KJ926927| PRGD_OTU004a_125ad104dd934bf3e1bd1864d7b2b81a, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_125ad104dd934bf3e1bd1864d7b2b81a, putative proteorhodopsin gene, partial cds. KJ926927 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683) CTGATCACTGTGCCGCTACTCATGGTTGAATTTTACCTAATCCTTAGGGCAGTCACGGCTGTCTCAGGCGGCATTTTCTGGCGTCTGATGATAGGTACACTAGTCATGCTTGTTGGTGGTTATGCTGGTGAAGTCGGCTATATCGGTGCATGGGCAGGCTTTATTATTGGTATGGTCGGTTGGGCTTACATTCTGTACGAAATCTTCGCAGGCGAAGCCAGCCGTGTTGCATCTGAAAAGGCATCCCCGGCCGTACAGTCAGCCTTTTCAACTATGCGTTGGATTGTATCCATT LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTGCCGCTACTCATGGTTGAATTTTACCTAATCCTTAGGGCA---------GTC---ACGGCTGTCTCAGGC---GGCATT------------------------------------TTCTGGCGT---CTGATGATAGGTACACTAGTCATGCTTGTTGGTGGTTATGCTGGTGAA---------GTC------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------GGTGCA------------------TGGGCAGGC---TTTATTATTGGTATGGTCGGTTGGGCTTACATTCTGTACGAAATC---------------TTC------GCA---GGCGAAGCCAGCCGTGTTGCATCTGAA------AAG---GCATCCCCGGCCGTA---CAG---TCA---GCC---TTT---TCA---ACTATG---CGTTGGATTGTATCCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926979 [III-Alpha3-a] PRGD_OTU004a_75bda757b718af2e38fde12fca54ad70 gb|KJ926979| PRGD_OTU004a_75bda757b718af2e38fde12fca54ad70, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_75bda757b718af2e38fde12fca54ad70, putative proteorhodopsin gene, partial cds. KJ926979 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTGATCACTGTGCCGCTACTCATGGTTGAATTTTACCTAATCCTAAGGGCAGTCACGGCTGTCTCAGGCGGCATTTTCTGGCGTCTGATGATAGGTACACTAGTCATGCTTGTTGGTGGTTATGCTGGTGAAGTCGGCTACATCGGTGCATGGGCAGGCTTTATTATTGGTATGGTCGGTTGGGCTTACATTCTGTACGAAATCTTCGCAGGCGAAGCCAGCCGTGTTGCATCTGAAAAGGCATCTCCGGCAGTACAGTCAGCCTTTTCAACTATGCGTTGGATTGTATCCATT LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTGCCGCTACTCATGGTTGAATTTTACCTAATCCTAAGGGCA---------GTC---ACGGCTGTCTCAGGC---GGCATT------------------------------------TTCTGGCGT---CTGATGATAGGTACACTAGTCATGCTTGTTGGTGGTTATGCTGGTGAA---------GTC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------GGTGCA------------------TGGGCAGGC---TTTATTATTGGTATGGTCGGTTGGGCTTACATTCTGTACGAAATC---------------TTC------GCA---GGCGAAGCCAGCCGTGTTGCATCTGAA------AAG---GCATCTCCGGCAGTA---CAG---TCA---GCC---TTT---TCA---ACTATG---CGTTGGATTGTATCCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926925 [III-Alpha3-a] PRGD_OTU004a_0e41ee5fd6b9ff60d165479c0906e793 gb|KJ926925| PRGD_OTU004a_0e41ee5fd6b9ff60d165479c0906e793, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_0e41ee5fd6b9ff60d165479c0906e793, putative proteorhodopsin gene, partial cds. KJ926925 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (73.9992, 19.2097), English Channel (48.7717, -3.9683) CTGATCACTGTGCCGCTACTCATGGTTGAATTTTACCTAATCCTAAGGGCAGTCACAGCTGTCTCAGGCGGCATTTTCTGGCGTCTGATGATAGGTACACTAGTCATGCTTGTTGGCGGTTATGCTGGTGAAGTCGGCTATATCGGTGCATGGGCAGGCTTTATTATTGGTATGGTCGGTTGGGCTTACATTCTGTACGAAATCTTCGCAGGCGAAGCCAGCCGTGTTGCATCGGAAAAGGCATCTCCGGCAGTACAGTCAGCCTTTTCAACTATGCGTTGGATTGTATCCATC LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTGCCGCTACTCATGGTTGAATTTTACCTAATCCTAAGGGCA---------GTC---ACAGCTGTCTCAGGC---GGCATT------------------------------------TTCTGGCGT---CTGATGATAGGTACACTAGTCATGCTTGTTGGCGGTTATGCTGGTGAA---------GTC------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------GGTGCA------------------TGGGCAGGC---TTTATTATTGGTATGGTCGGTTGGGCTTACATTCTGTACGAAATC---------------TTC------GCA---GGCGAAGCCAGCCGTGTTGCATCGGAA------AAG---GCATCTCCGGCAGTA---CAG---TCA---GCC---TTT---TCA---ACTATG---CGTTGGATTGTATCCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ927032 [III-Alpha3-a] PRGD_OTU004a_f170c5ec1d812e8003746b8c1f2ec0dd gb|KJ927032| PRGD_OTU004a_f170c5ec1d812e8003746b8c1f2ec0dd, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_f170c5ec1d812e8003746b8c1f2ec0dd, putative proteorhodopsin gene, partial cds. KJ927032 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) CTGATCACCGTGCCGCTACTTATGGTTGAATTTTACCTAATCCTGCGAGCAGTCACAGCTGTCTCAGGCGGCATTTTCTGGCGTCTGATGATAGGTACGTTAGTCATGCTTGTTGGTGGTTATGCTGGTGAAGTCGGTTATATCGGCGCATGGGCAGGCTTTATTATTGGTATGGTCGGTTGGGCCTACATTCTGTACGAAATCTTTGCAGGTGAAGCCAGTCGCGTTGCATCTGAGAAGGCATCTCCAGCAGTACAGTCAGCCTTTTCAACTATGCGTTGGATTGTATCTATT LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTGCCGCTACTTATGGTTGAATTTTACCTAATCCTGCGAGCA---------GTC---ACAGCTGTCTCAGGC---GGCATT------------------------------------TTCTGGCGT---CTGATGATAGGTACGTTAGTCATGCTTGTTGGTGGTTATGCTGGTGAA---------GTC------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------GGCGCA------------------TGGGCAGGC---TTTATTATTGGTATGGTCGGTTGGGCCTACATTCTGTACGAAATC---------------TTT------GCA---GGTGAAGCCAGTCGCGTTGCATCTGAG------AAG---GCATCTCCAGCAGTA---CAG---TCA---GCC---TTT---TCA---ACTATG---CGTTGGATTGTATCTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926964 [III-Alpha3-a] PRGD_OTU004a_56ef0191664f31dfe2688e93a26ef62e gb|KJ926964| PRGD_OTU004a_56ef0191664f31dfe2688e93a26ef62e, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_56ef0191664f31dfe2688e93a26ef62e, putative proteorhodopsin gene, partial cds. KJ926964 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATCACTGTTCCGCTACTCATGGTTGAATTTTACCTAATCCTACGGGCAGTCACGGCTGTTTCAGGCGGCATTTTCTGGCGCCTGATGATAGGTACACTAGTCATGCTTGTTGGCGGTTATGCTGGTGAAGTCGGCTATATCGGCGCATGGGCAGGCTTTATTATTGGCATGATTGGTTGGGCTTACATTCTGTACGAAATCTTTGCAGGCGAAGCCAGCCGTGTTGCATCTGAAAAGGCATCTCCAGCAGTACAGTCAGCTTTTTCAACTATGCGTTGGATTGTATCGATT LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMIGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTTCCGCTACTCATGGTTGAATTTTACCTAATCCTACGGGCA---------GTC---ACGGCTGTTTCAGGC---GGCATT------------------------------------TTCTGGCGC---CTGATGATAGGTACACTAGTCATGCTTGTTGGCGGTTATGCTGGTGAA---------GTC------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------GGCGCA------------------TGGGCAGGC---TTTATTATTGGCATGATTGGTTGGGCTTACATTCTGTACGAAATC---------------TTT------GCA---GGCGAAGCCAGCCGTGTTGCATCTGAA------AAG---GCATCTCCAGCAGTA---CAG---TCA---GCT---TTT---TCA---ACTATG---CGTTGGATTGTATCGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMIGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926995 [III-Alpha3-a] PRGD_OTU004a_a683733fa6d2bec972f43767dba9a3fe gb|KJ926995| PRGD_OTU004a_a683733fa6d2bec972f43767dba9a3fe, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_a683733fa6d2bec972f43767dba9a3fe, putative proteorhodopsin gene, partial cds. KJ926995 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-33.28, 45.35) CTGATCACTGTTCCGCTACTCATGGTTGAATTTTACCTAATCCTACGGGCAGTCACGGCTGTTTCAGGCGGCATTTTCTGGCGCCTGATGATAGGTACACTAGTCATGCTTGTTGGTGGCTATGCTGGTGAAGTCGGCTATATCGGTGCATGGGCAGGCTTTATTATTGGTATGGTCGGTTGGGCTTACATTCTGTACGAAATCTTTGCAGGCGAAGCCAGCCGTGTTGCATCTGAAAAGGCATCTCCAGCAGTACAGTCAGCCTTTTCAACTATGCGTTGGATTGTATCGATC LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTTCCGCTACTCATGGTTGAATTTTACCTAATCCTACGGGCA---------GTC---ACGGCTGTTTCAGGC---GGCATT------------------------------------TTCTGGCGC---CTGATGATAGGTACACTAGTCATGCTTGTTGGTGGCTATGCTGGTGAA---------GTC------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------GGTGCA------------------TGGGCAGGC---TTTATTATTGGTATGGTCGGTTGGGCTTACATTCTGTACGAAATC---------------TTT------GCA---GGCGAAGCCAGCCGTGTTGCATCTGAA------AAG---GCATCTCCAGCAGTA---CAG---TCA---GCC---TTT---TCA---ACTATG---CGTTGGATTGTATCGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926971 [III-Alpha3-a] PRGD_OTU004a_6112f72c2545485ff7e6d5b570801cee gb|KJ926971| PRGD_OTU004a_6112f72c2545485ff7e6d5b570801cee, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_6112f72c2545485ff7e6d5b570801cee, putative proteorhodopsin gene, partial cds. KJ926971 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) CTGATCACTGTGCCGCTACTCATGGTTGAATTTTACCTAATCCTTCGGGCAGTCACGGCTGTCTCAGGCGGCATTTTCTGGCGCCTGATGATAGGTACACTAGTTATGCTTGTTGGTGGTTATGCTGGTGAGGTTGGCTATATCGGTGCATGGGCAGGCTTCATTATTGGTATGGTCGGTTGGGCTTATATTCTGTACGAAATCTTTGCAGGCGAAGCCAGCCGTGTTGCATCTGAAAAGGCATCTCCGGCAGTACAGTCAGCCTTTTCAACTATGCGCTGGATTGTATCCATT LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTGCCGCTACTCATGGTTGAATTTTACCTAATCCTTCGGGCA---------GTC---ACGGCTGTCTCAGGC---GGCATT------------------------------------TTCTGGCGC---CTGATGATAGGTACACTAGTTATGCTTGTTGGTGGTTATGCTGGTGAG---------GTT------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------GGTGCA------------------TGGGCAGGC---TTCATTATTGGTATGGTCGGTTGGGCTTATATTCTGTACGAAATC---------------TTT------GCA---GGCGAAGCCAGCCGTGTTGCATCTGAA------AAG---GCATCTCCGGCAGTA---CAG---TCA---GCC---TTT---TCA---ACTATG---CGCTGGATTGTATCCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926923 [III-Alpha3-a] PRGD_OTU004a_05964d7cd6801fd27e62f3b5360a87be gb|KJ926923| PRGD_OTU004a_05964d7cd6801fd27e62f3b5360a87be, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_05964d7cd6801fd27e62f3b5360a87be, putative proteorhodopsin gene, partial cds. KJ926923 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATCACTGTGCCGCTACTCATGGTTGAATTTTACCTGATCCTACGGGCAGTCACGGCTGTTTCAGGCGGCATTTTCTGGCGTCTGATGATCGGCACACTAGTCATGCTTGTCGGCGGTTATGCTGGTGAGGTTGGCTATATCGGTGCATGGGCAGGCTTTATTATTGGTATGGTCGGTTGGGCCTACATTCTGTACGAAATTTTTGCAGGCGAAGCCAGCCGTGTTGCATCTGAAAAGGCATCTCCGGCAGTCCAGTCAGCCTTTTCAACTATGCGTTGGATTGTATCCATT LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTGCCGCTACTCATGGTTGAATTTTACCTGATCCTACGGGCA---------GTC---ACGGCTGTTTCAGGC---GGCATT------------------------------------TTCTGGCGT---CTGATGATCGGCACACTAGTCATGCTTGTCGGCGGTTATGCTGGTGAG---------GTT------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------GGTGCA------------------TGGGCAGGC---TTTATTATTGGTATGGTCGGTTGGGCCTACATTCTGTACGAAATT---------------TTT------GCA---GGCGAAGCCAGCCGTGTTGCATCTGAA------AAG---GCATCTCCGGCAGTC---CAG---TCA---GCC---TTT---TCA---ACTATG---CGTTGGATTGTATCCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926931 [III-Alpha3-a] PRGD_OTU004a_150b6689ee0b9f41d391ec4f9d8d1daa gb|KJ926931| PRGD_OTU004a_150b6689ee0b9f41d391ec4f9d8d1daa, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_150b6689ee0b9f41d391ec4f9d8d1daa, putative proteorhodopsin gene, partial cds. KJ926931 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419) CTGATCACTGTGCCGCTGCTTATGGTTGAGTTCTACCTAATTCTACGGGCAGTTACGGCTGTATCAGCCGGCATTTTCTGGCGTCTGATGATCGGCACACTAGTCATGCTTGTCGGCGGTTATGCTGGTGAGGTTGGGTATATCAGTGCTTGGGCAGGCTTTATTATTGGTATGGTCGGTTGGGCCTACATTCTTTACGAAATCTTTGCAGGCGAAGCCAGCCGTGTTGCATCTGAAAAGGCATCTCCAGCAGTGCAGTCTGCCTTTTCAACTATGCGTTGGATTGTATCTATC LITVPLLMVEFYLILRAVTAVSAGIFWRLMIGTLVMLVGGYAGEVGYISAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTGCCGCTGCTTATGGTTGAGTTCTACCTAATTCTACGGGCA---------GTT---ACGGCTGTATCAGCC---GGCATT------------------------------------TTCTGGCGT---CTGATGATCGGCACACTAGTCATGCTTGTCGGCGGTTATGCTGGTGAG---------GTT------------------GGG------TAT---------------------------------ATC------------------------------------------------------------------AGTGCT------------------TGGGCAGGC---TTTATTATTGGTATGGTCGGTTGGGCCTACATTCTTTACGAAATC---------------TTT------GCA---GGCGAAGCCAGCCGTGTTGCATCTGAA------AAG---GCATCTCCAGCAGTG---CAG---TCT---GCC---TTT---TCA---ACTATG---CGTTGGATTGTATCTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSA-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------SA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ927012 [III-Alpha3-a] PRGD_OTU004a_c835f2990c80c9eb2dfbf236d40858c9 gb|KJ927012| PRGD_OTU004a_c835f2990c80c9eb2dfbf236d40858c9, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_c835f2990c80c9eb2dfbf236d40858c9, putative proteorhodopsin gene, partial cds. KJ927012 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833) CTGATCACTGTGCCGCTACTCATGGTTGAATTCTACCTAATCCTGAGGGCAGTCACGGCTGTATCAGGCGGTATTTTCTGGCGTCTGATGATCGGCACACTGGTAATGCTTGTCGGCGGTTATGCTGGTGAAGTTGGCTATATTGGTGCATGGGCAGGCTTTATTATTGGTATGGTCGGGTGGGCATACATTCTTTACGAAATCTTTGCAGGTGAAGCCAGCCGGGTTGCGTCTGAAAAGGCATCTCCAGCAGTGCAGTCAGCCTTTTCAACCATGCGTTGGATTGTATCTATC LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTGCCGCTACTCATGGTTGAATTCTACCTAATCCTGAGGGCA---------GTC---ACGGCTGTATCAGGC---GGTATT------------------------------------TTCTGGCGT---CTGATGATCGGCACACTGGTAATGCTTGTCGGCGGTTATGCTGGTGAA---------GTT------------------GGC------TAT---------------------------------ATT------------------------------------------------------------------GGTGCA------------------TGGGCAGGC---TTTATTATTGGTATGGTCGGGTGGGCATACATTCTTTACGAAATC---------------TTT------GCA---GGTGAAGCCAGCCGGGTTGCGTCTGAA------AAG---GCATCTCCAGCAGTG---CAG---TCA---GCC---TTT---TCA---ACCATG---CGTTGGATTGTATCTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926936 [III-Alpha3-a] PRGD_OTU004a_1ef4ccf9322eac08a14a28a6351e78ef gb|KJ926936| PRGD_OTU004a_1ef4ccf9322eac08a14a28a6351e78ef, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_1ef4ccf9322eac08a14a28a6351e78ef, putative proteorhodopsin gene, partial cds. KJ926936 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683) CTGATCACGGTTCCGCTGCTTATGATTGAATTCTACCTAATCCTTCGGGCAGTCACGGCTGTATCAGGCGGCATTTTCTGGCGCTTGATGATTGGTACAGTTGTCATGCTGGCTGGCGGTTATGCTGGTGAGGTTGGTTACATTGACCCGTGGGTTGGTTTCATCATCGGCATGCTCGGTTGGGCATACATTCTGTACGAAATCTTTGCAGGCGAAGCCAGCCGTGTTGCATCTGAAAAGGCATCTCCAGCAGTACAGTCAGCCTTTTCAACTATGCGTTGGATTGTATCTATT LITVPLLMIEFYLILRAVTAVSGGIFWRLMIGTVVMLAGGYAGEVGYIDPWVGFIIGMLGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACGGTTCCGCTGCTTATGATTGAATTCTACCTAATCCTTCGGGCA---------GTC---ACGGCTGTATCAGGC---GGCATT------------------------------------TTCTGGCGC---TTGATGATTGGTACAGTTGTCATGCTGGCTGGCGGTTATGCTGGTGAG---------GTT------------------GGT------TAC---------------------------------ATT------------------------------------------------------------------GACCCG------------------TGGGTTGGT---TTCATCATCGGCATGCTCGGTTGGGCATACATTCTGTACGAAATC---------------TTT------GCA---GGCGAAGCCAGCCGTGTTGCATCTGAA------AAG---GCATCTCCAGCAGTA---CAG---TCA---GCC---TTT---TCA---ACTATG---CGTTGGATTGTATCTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---V-TAVSG-GI------------FWR-LMIGTVVMLAGGYAGE---V------G--Y-----------I----------------------DP------WVG-FIIGMLGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926956 [III-Alpha3-a] PRGD_OTU004a_474436297560fff7fead6b49fdc5cc8f gb|KJ926956| PRGD_OTU004a_474436297560fff7fead6b49fdc5cc8f, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_474436297560fff7fead6b49fdc5cc8f, putative proteorhodopsin gene, partial cds. KJ926956 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683) CTGATCACGGTTCCGCTACTTATGATTGAATTCTACCTAATCCTTCGGGCAGTCACGGCTGTATCAGGCGGCATTTTCTGGCGCTTGATGATTGGTACAATTGTCATGCTGGCTGGTGGTTATGCTGGTGAGGTTGGTTACATTGACCCGTGGGTTGGTTTCATCATCGGCATGCTCGGTTGGGCATACATTCTGTACGAAATCTTTGCAGGCGAAGCCAGCCGTGTTGCATCTGAAAAGGCATCTCCAGCAGTACAGTCAGCCTTTTCAACTATGCGTTGGATTGTATCTATT LITVPLLMIEFYLILRAVTAVSGGIFWRLMIGTIVMLAGGYAGEVGYIDPWVGFIIGMLGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACGGTTCCGCTACTTATGATTGAATTCTACCTAATCCTTCGGGCA---------GTC---ACGGCTGTATCAGGC---GGCATT------------------------------------TTCTGGCGC---TTGATGATTGGTACAATTGTCATGCTGGCTGGTGGTTATGCTGGTGAG---------GTT------------------GGT------TAC---------------------------------ATT------------------------------------------------------------------GACCCG------------------TGGGTTGGT---TTCATCATCGGCATGCTCGGTTGGGCATACATTCTGTACGAAATC---------------TTT------GCA---GGCGAAGCCAGCCGTGTTGCATCTGAA------AAG---GCATCTCCAGCAGTA---CAG---TCA---GCC---TTT---TCA---ACTATG---CGTTGGATTGTATCTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---V-TAVSG-GI------------FWR-LMIGTIVMLAGGYAGE---V------G--Y-----------I----------------------DP------WVG-FIIGMLGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926968 [III-Alpha3-a] PRGD_OTU004a_5b7b0d602eb0c3f3cbad4c88f46d829f gb|KJ926968| PRGD_OTU004a_5b7b0d602eb0c3f3cbad4c88f46d829f, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_5b7b0d602eb0c3f3cbad4c88f46d829f, putative proteorhodopsin gene, partial cds. KJ926968 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTGATCACGGTTCCGCTGCTTATGATTGAATTCTACCTAATCCTTCGGGCAGTCACGGCTGTATCAGGCGGCATTTTCTGGCGCCTGATGATTGGTACAGTTGTCATGCTGGCTGGCGGTTATGCTGGTGAGGTTGGCTACATTGACCCATGGGTTGGTTTCATCATCGGCATGCTCGGTTGGGCATACATTCTGTACGAAATCTTTGCAGGCGAAGCCAGCCGTGTTGCATCTGAAAAGGCATCTCCAGCAGTACAGTCAGCCTTTTCAACTATGCGTTGGATTGTATCTATC LITVPLLMIEFYLILRAVTAVSGGIFWRLMIGTVVMLAGGYAGEVGYIDPWVGFIIGMLGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACGGTTCCGCTGCTTATGATTGAATTCTACCTAATCCTTCGGGCA---------GTC---ACGGCTGTATCAGGC---GGCATT------------------------------------TTCTGGCGC---CTGATGATTGGTACAGTTGTCATGCTGGCTGGCGGTTATGCTGGTGAG---------GTT------------------GGC------TAC---------------------------------ATT------------------------------------------------------------------GACCCA------------------TGGGTTGGT---TTCATCATCGGCATGCTCGGTTGGGCATACATTCTGTACGAAATC---------------TTT------GCA---GGCGAAGCCAGCCGTGTTGCATCTGAA------AAG---GCATCTCCAGCAGTA---CAG---TCA---GCC---TTT---TCA---ACTATG---CGTTGGATTGTATCTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---V-TAVSG-GI------------FWR-LMIGTVVMLAGGYAGE---V------G--Y-----------I----------------------DP------WVG-FIIGMLGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926930 [III-Alpha3-a] PRGD_OTU004a_13212a2c9fb20d6fc42b723c6f604966 gb|KJ926930| PRGD_OTU004a_13212a2c9fb20d6fc42b723c6f604966, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_13212a2c9fb20d6fc42b723c6f604966, putative proteorhodopsin gene, partial cds. KJ926930 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185) TTGATCACGGTTCCGCTGCTTATGGTTGAATTCTACCTAATCCTTCGAGCAGTCACGACTGTATCAGGCGGCATTTTCTGGCGTCTGATGATTGGTACAGTTGTCATGCTGGCTGGCGGTTACGCCGGCGAGGTTGGCTACATCGACCCGTGGGTCGGTTTCATCATTGGCATGCTCGGTTGGGCATACATTCTGTACGAAATCTTTGCAGGCGAAGCCAGTCGTGTTGCATCTGAAAAGGCATCTCCAGCAGTGCAGTCAGCCTTTTCAACTATGCGTTGGATTGTATCCATT LITVPLLMVEFYLILRAVTTVSGGIFWRLMIGTVVMLAGGYAGEVGYIDPWVGFIIGMLGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACGGTTCCGCTGCTTATGGTTGAATTCTACCTAATCCTTCGAGCA---------GTC---ACGACTGTATCAGGC---GGCATT------------------------------------TTCTGGCGT---CTGATGATTGGTACAGTTGTCATGCTGGCTGGCGGTTACGCCGGCGAG---------GTT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------GACCCG------------------TGGGTCGGT---TTCATCATTGGCATGCTCGGTTGGGCATACATTCTGTACGAAATC---------------TTT------GCA---GGCGAAGCCAGTCGTGTTGCATCTGAA------AAG---GCATCTCCAGCAGTG---CAG---TCA---GCC---TTT---TCA---ACTATG---CGTTGGATTGTATCCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TTVSG-GI------------FWR-LMIGTVVMLAGGYAGE---V------G--Y-----------I----------------------DP------WVG-FIIGMLGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926941 [III-Alpha3-a] PRGD_OTU004a_2459ac5f90b4962a7ce79d5100ddc463 gb|KJ926941| PRGD_OTU004a_2459ac5f90b4962a7ce79d5100ddc463, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_2459ac5f90b4962a7ce79d5100ddc463, putative proteorhodopsin gene, partial cds. KJ926941 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683) TTGATCACAGTGCCGTTGCTTATGGTTGAATTCTACCTAATCCTTAGAGCTGTCACGGCTGTATCAGGCGGCATTTTCTGGCGTTTGATGATCGGCACACTGGTCATGCTTGTCGGCGGTTATGCTGGTGAGGTTGGTTACATCAGCGCATGGGCCGGTTTCATTATCGGTATGGTTGGTTGGGCCTACATCCTTTACGAAATCTTTGCAGGTGAAGCCAGCCGTGTTGCATCTGAAAAGGCGTCACCGGCAGTTCAATCAGCTTTTTCAACAATGCGTTGGATTGTATCTATT LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYISAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCGTTGCTTATGGTTGAATTCTACCTAATCCTTAGAGCT---------GTC---ACGGCTGTATCAGGC---GGCATT------------------------------------TTCTGGCGT---TTGATGATCGGCACACTGGTCATGCTTGTCGGCGGTTATGCTGGTGAG---------GTT------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AGCGCA------------------TGGGCCGGT---TTCATTATCGGTATGGTTGGTTGGGCCTACATCCTTTACGAAATC---------------TTT------GCA---GGTGAAGCCAGCCGTGTTGCATCTGAA------AAG---GCGTCACCGGCAGTT---CAA---TCA---GCT---TTT---TCA---ACAATG---CGTTGGATTGTATCTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------SA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926992 [III-Alpha3-a] PRGD_OTU004a_9513d7562cb0cfca8411b27618911963 gb|KJ926992| PRGD_OTU004a_9513d7562cb0cfca8411b27618911963, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_9513d7562cb0cfca8411b27618911963, putative proteorhodopsin gene, partial cds. KJ926992 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTGATCACAGTGCCGTTGCTTATGGTTGAATTCTACCTAATCCTCAGAGCTGTCACGGCTGTATCAGGCGGCATTTTCTGGCGTTTGATGATCGGCACACTAGTCATGCTTGTCGGCGGTTATGCTGGTGAAGTTGGTTACATCAGCGCATGGGCCGGTTTCATTATCGGTATGGTTGGTTGGGCCTACATCCTTTACGAAATCTTTGCAGGTGAAGCCAGCCGTGTTGCATCTGAAAAGGCATCACCGGCAGTTCAGTCAGCTTTTTCAACAATGCGTTGGATTGTATCTATT LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYISAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCGTTGCTTATGGTTGAATTCTACCTAATCCTCAGAGCT---------GTC---ACGGCTGTATCAGGC---GGCATT------------------------------------TTCTGGCGT---TTGATGATCGGCACACTAGTCATGCTTGTCGGCGGTTATGCTGGTGAA---------GTT------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AGCGCA------------------TGGGCCGGT---TTCATTATCGGTATGGTTGGTTGGGCCTACATCCTTTACGAAATC---------------TTT------GCA---GGTGAAGCCAGCCGTGTTGCATCTGAA------AAG---GCATCACCGGCAGTT---CAG---TCA---GCT---TTT---TCA---ACAATG---CGTTGGATTGTATCTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------SA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ927000 [III-Alpha3-a] PRGD_OTU004a_b16c82e21bbfa40a73ee77bcae3c3007 gb|KJ927000| PRGD_OTU004a_b16c82e21bbfa40a73ee77bcae3c3007, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_b16c82e21bbfa40a73ee77bcae3c3007, putative proteorhodopsin gene, partial cds. KJ927000 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097), English Channel (48.7717, -3.9683) TTGATCACTGTGCCGTTGCTTATGGTTGAATTTTACCTAATCCTTAGAGCTGTCACGGCTGTATCAGGCGGCATTTTCTGGCGGTTGATGATCGGCACACTGGTCATGCTTGTCGGCGGTTATGCTGGTGAGGTTGGCTACATCAGCGCATGGGCCGGTTTCATTATCGGTATGGTTGGTTGGGCCTACATCCTTTACGAAATCTTTGCAGGTGAAGCCAGCCGTGTTGCATCTGAAAAGGCATCACCGGCAGTTCAGTCAGCTTTTTCAACAATGCGTTGGATTGTGTCTATT LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYISAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCGTTGCTTATGGTTGAATTTTACCTAATCCTTAGAGCT---------GTC---ACGGCTGTATCAGGC---GGCATT------------------------------------TTCTGGCGG---TTGATGATCGGCACACTGGTCATGCTTGTCGGCGGTTATGCTGGTGAG---------GTT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGCGCA------------------TGGGCCGGT---TTCATTATCGGTATGGTTGGTTGGGCCTACATCCTTTACGAAATC---------------TTT------GCA---GGTGAAGCCAGCCGTGTTGCATCTGAA------AAG---GCATCACCGGCAGTT---CAG---TCA---GCT---TTT---TCA---ACAATG---CGTTGGATTGTGTCTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------SA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926952 [III-Alpha3-a] PRGD_OTU004a_3f127664cceae2586612fc13c26eed68 gb|KJ926952| PRGD_OTU004a_3f127664cceae2586612fc13c26eed68, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_3f127664cceae2586612fc13c26eed68, putative proteorhodopsin gene, partial cds. KJ926952 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 01-juil-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683) CTGATCACTGTGCCGCTGCTTATGGTTGAATTTTACCTAATCCTACGGGCAGTCACGGCTGTATCAGGCGGCATTTTTTGGCGTTTGATGATAGGCACACTGGTTATGCTAGTTGGTGGTTATGCTGGCGAGGTTGGTTACATCAGCGCATGGGCCGGTTTCATCATCGGTATGGTTGGTTGGGCCTACATCCTGTACGAAATCTTTGCAGGTGAAGCTAGCCGCGTTGCATCTGAAAAGGCATCACCGGCTGTTCAGTCAGCTTTTTCAACAATGCGTTGGATTGTATCTATA LITVPLLMVEFYLILRAVTAVSGGIFWRLMIGTLVMLVGGYAGEVGYISAWAGFIIGMVGWAYILYEIFAGEASRVASEKASPAVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTGCCGCTGCTTATGGTTGAATTTTACCTAATCCTACGGGCA---------GTC---ACGGCTGTATCAGGC---GGCATT------------------------------------TTTTGGCGT---TTGATGATAGGCACACTGGTTATGCTAGTTGGTGGTTATGCTGGCGAG---------GTT------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AGCGCA------------------TGGGCCGGT---TTCATCATCGGTATGGTTGGTTGGGCCTACATCCTGTACGAAATC---------------TTT------GCA---GGTGAAGCTAGCCGCGTTGCATCTGAA------AAG---GCATCACCGGCTGTT---CAG---TCA---GCT---TTT---TCA---ACAATG---CGTTGGATTGTATCTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---V-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------SA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVASE--K-ASPAV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ927016 [III-Alpha3-a] PRGD_OTU004a_ccad5583152ca5ea2b407b65a1fed5c4 gb|KJ927016| PRGD_OTU004a_ccad5583152ca5ea2b407b65a1fed5c4, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_ccad5583152ca5ea2b407b65a1fed5c4, putative proteorhodopsin gene, partial cds. KJ927016 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419) CTGATCACTGTGCCACTTCTGATGATTGAATTCTACCTGATCCTACGGGCAATCACCGTTGTATCTGGCGGCATTTTCTGGCGTCTGATGATCGGTACTTTTGTCATGCTCGTTGGTGGTTATGCTGGCGAAGTTGGTTACATCAGTGCTTGGGCAGGTTTCATCATCGGTATGCTCGGTTGGGCATATATCCTGTGGGAGATCTTTGCAGGTGAAGCCAGCCGTATTGCTGCTGAAAAAGCGCCTGCTTCTGTGCAGTCAGCCTTTTCAACAATGCGTTGGATTGTCACAATT LITVPLLMIEFYLILRAITVVSGGIFWRLMIGTFVMLVGGYAGEVGYISAWAGFIIGMLGWAYILWEIFAGEASRIAAEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTGCCACTTCTGATGATTGAATTCTACCTGATCCTACGGGCA---------ATC---ACCGTTGTATCTGGC---GGCATT------------------------------------TTCTGGCGT---CTGATGATCGGTACTTTTGTCATGCTCGTTGGTGGTTATGCTGGCGAA---------GTT------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AGTGCT------------------TGGGCAGGT---TTCATCATCGGTATGCTCGGTTGGGCATATATCCTGTGGGAGATC---------------TTT------GCA---GGTGAAGCCAGCCGTATTGCTGCTGAA------AAA---GCGCCTGCTTCTGTG---CAG---TCA---GCC---TTT---TCA---ACAATG---CGTTGGATTGTCACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TVVSG-GI------------FWR-LMIGTFVMLVGGYAGE---V------G--Y-----------I----------------------SA------WAG-FIIGMLGWAYILWEI-----F--A-GEASRIAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926950 [III-Alpha3-a] PRGD_OTU004a_3b18858aa4ce3b44c37bfb671b3ae331 gb|KJ926950| PRGD_OTU004a_3b18858aa4ce3b44c37bfb671b3ae331, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_3b18858aa4ce3b44c37bfb671b3ae331, putative proteorhodopsin gene, partial cds. KJ926950 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) CTAATCACTGTGCCATTGCTGATGATCGAATTCTATTTGATCTTGCGGGCCATTACAGCCGTCTCCGGAGGTATCTTCTGGCGTCTGATGATTGGTACAATGGTTATGTTGGTCGGTGGTTATGCTGGCGAGGTGGGTTACATCGGCGCATGGGCCGGATTCATCATCGGTATGGTCGGTTGGGCGTACATCCTGTATGAGATCTTTGCAGGTGAAGCCAGCCGGGTTGCGGCCGAACAGGCACCCCCATCAGTTCAGTCAGCCTTTTCAACAATGCGTTGGATCGTAACCATT LITVPLLMIEFYLILRAITAVSGGIFWRLMIGTMVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVAAEQAPPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACTGTGCCATTGCTGATGATCGAATTCTATTTGATCTTGCGGGCC---------ATT---ACAGCCGTCTCCGGA---GGTATC------------------------------------TTCTGGCGT---CTGATGATTGGTACAATGGTTATGTTGGTCGGTGGTTATGCTGGCGAG---------GTG------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------GGCGCA------------------TGGGCCGGA---TTCATCATCGGTATGGTCGGTTGGGCGTACATCCTGTATGAGATC---------------TTT------GCA---GGTGAAGCCAGCCGGGTTGCGGCCGAA------CAG---GCACCCCCATCAGTT---CAG---TCA---GCC---TTT---TCA---ACAATG---CGTTGGATCGTAACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTMVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVAAE--Q-APPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ927033 [III-Alpha3-a] PRGD_OTU004a_f449c6c82da9ea40eb7e1453fd59f590 gb|KJ927033| PRGD_OTU004a_f449c6c82da9ea40eb7e1453fd59f590, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_f449c6c82da9ea40eb7e1453fd59f590, putative proteorhodopsin gene, partial cds. KJ927033 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATCACCGTGCCATTGTTGATGATCGAATTCTATTTGATCTTGCGGGCCATTACAGCCGTCTCCGGAGGTATCTTCTGGCGTCTGATGATTGGTACAATGGTTATGTTGATCGGTGGTTATGCTGGCGAGGTGGGTTACATCGGCGCATGGGCCGGATTCATCATCGGCATGGTCGGTTGGGCGTACATCCTGTACGAGATCTTTGCCGGCGAAGCAAGCCGGGTTGCGGCCGAACAGGCACCCCCATCAGTTCAGTCAGCCTTTTCAACAATGCGTTGGATCGTGACCATT LITVPLLMIEFYLILRAITAVSGGIFWRLMIGTMVMLIGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVAAEQAPPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACCGTGCCATTGTTGATGATCGAATTCTATTTGATCTTGCGGGCC---------ATT---ACAGCCGTCTCCGGA---GGTATC------------------------------------TTCTGGCGT---CTGATGATTGGTACAATGGTTATGTTGATCGGTGGTTATGCTGGCGAG---------GTG------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------GGCGCA------------------TGGGCCGGA---TTCATCATCGGCATGGTCGGTTGGGCGTACATCCTGTACGAGATC---------------TTT------GCC---GGCGAAGCAAGCCGGGTTGCGGCCGAA------CAG---GCACCCCCATCAGTT---CAG---TCA---GCC---TTT---TCA---ACAATG---CGTTGGATCGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTMVMLIGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVAAE--Q-APPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926988 [III-Alpha3-a] PRGD_OTU004a_8c73c3fc77aa0a5b9c968668e4d5249b gb|KJ926988| PRGD_OTU004a_8c73c3fc77aa0a5b9c968668e4d5249b, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_8c73c3fc77aa0a5b9c968668e4d5249b, putative proteorhodopsin gene, partial cds. KJ926988 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419) CTAATCACCGTGCCGTTGCTAATGATCGAATTCTATCTGATCTTGCGGGCCATTACAGCCGTCTCCGGCGGTATTTTCTGGCGTCTGATGATTGGTACAATGGTTATGTTGGTCGGTGGTTATGCTGGCGAGGTGGGTTACATCGGCGCATGGGCCGGATTCATCATCGGCATGGTCGGTTGGGCGTACATCTTGTATGAAATCTTTGCAGGTGAAGCCAGCCGGGTTGCGGCCGAACAGGCACCGCCATCGGTTCAGTCAGCCTTTTCAACAATGCGTTGGATCGTGACCATT LITVPLLMIEFYLILRAITAVSGGIFWRLMIGTMVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVAAEQAPPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACCGTGCCGTTGCTAATGATCGAATTCTATCTGATCTTGCGGGCC---------ATT---ACAGCCGTCTCCGGC---GGTATT------------------------------------TTCTGGCGT---CTGATGATTGGTACAATGGTTATGTTGGTCGGTGGTTATGCTGGCGAG---------GTG------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------GGCGCA------------------TGGGCCGGA---TTCATCATCGGCATGGTCGGTTGGGCGTACATCTTGTATGAAATC---------------TTT------GCA---GGTGAAGCCAGCCGGGTTGCGGCCGAA------CAG---GCACCGCCATCGGTT---CAG---TCA---GCC---TTT---TCA---ACAATG---CGTTGGATCGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTMVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVAAE--Q-APPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926955 [III-Alpha3-a] PRGD_OTU004a_470cc81535e1de2ed88803ddad23e648 gb|KJ926955| PRGD_OTU004a_470cc81535e1de2ed88803ddad23e648, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_470cc81535e1de2ed88803ddad23e648, putative proteorhodopsin gene, partial cds. KJ926955 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATCACCGTGCCATTGCTGATGATCGAATTCTACTTGATCTTGCGGGCCATTACAGCCGTCTCTGGCGGTATCTTTTGGCGTTTGATGATTGGTACAATGGTCATGCTGGTTGGTGGTTACGCTGGCGAGGTGGGTTACATCGGCGCGTGGGCCGGATTCATCATCGGTATGGTCGGTTGGGCGTACATCCTGTATGAGATCTTTGCAGGTGAAGCCAGCCGGGTTGCGGCCGAACAGGCACCGCCATCAGTGCAGTCAGCCTTTTCAACAATGCGTTGGATTGTGACCATT LITVPLLMIEFYLILRAITAVSGGIFWRLMIGTMVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVAAEQAPPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACCGTGCCATTGCTGATGATCGAATTCTACTTGATCTTGCGGGCC---------ATT---ACAGCCGTCTCTGGC---GGTATC------------------------------------TTTTGGCGT---TTGATGATTGGTACAATGGTCATGCTGGTTGGTGGTTACGCTGGCGAG---------GTG------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------GGCGCG------------------TGGGCCGGA---TTCATCATCGGTATGGTCGGTTGGGCGTACATCCTGTATGAGATC---------------TTT------GCA---GGTGAAGCCAGCCGGGTTGCGGCCGAA------CAG---GCACCGCCATCAGTG---CAG---TCA---GCC---TTT---TCA---ACAATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTMVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVAAE--Q-APPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926970 [III-Alpha3-a] PRGD_OTU004a_5e540a0e00c8a5bb1c01e43d426c8ff2 gb|KJ926970| PRGD_OTU004a_5e540a0e00c8a5bb1c01e43d426c8ff2, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_5e540a0e00c8a5bb1c01e43d426c8ff2, putative proteorhodopsin gene, partial cds. KJ926970 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATCACCGTGCCATTGCTGATGATCGAATTCTACTTAATCTTGCGGGCCATTACAGCCGTCTCTGGCGGTATCTTCTGGCGTCTGATGATTGGTACAATGGTCATGCTGGTTGGTGGTTATGCTGGCGAAGTGGGTTACATCGGCGCGTGGGCCGGATTCATCATCGGTATGGTCGGTTGGGCGTACATCCTGTATGAGATCTTTGCAGGTGAAGCCAGCCGGGTTGCGGCCGAACAGGCACCGCCATCAGTGCAGTCAGCCTTTTCAACAATGCGTTGGATCGTGACCATT LITVPLLMIEFYLILRAITAVSGGIFWRLMIGTMVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVAAEQAPPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACCGTGCCATTGCTGATGATCGAATTCTACTTAATCTTGCGGGCC---------ATT---ACAGCCGTCTCTGGC---GGTATC------------------------------------TTCTGGCGT---CTGATGATTGGTACAATGGTCATGCTGGTTGGTGGTTATGCTGGCGAA---------GTG------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------GGCGCG------------------TGGGCCGGA---TTCATCATCGGTATGGTCGGTTGGGCGTACATCCTGTATGAGATC---------------TTT------GCA---GGTGAAGCCAGCCGGGTTGCGGCCGAA------CAG---GCACCGCCATCAGTG---CAG---TCA---GCC---TTT---TCA---ACAATG---CGTTGGATCGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTMVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVAAE--Q-APPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926986 [III-Alpha3-a] PRGD_OTU004a_8a90e23fc5facd69f96aeff2eb5842fe gb|KJ926986| PRGD_OTU004a_8a90e23fc5facd69f96aeff2eb5842fe, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_8a90e23fc5facd69f96aeff2eb5842fe, putative proteorhodopsin gene, partial cds. KJ926986 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTAATCACCGTGCCATTGCTGATGATCGAATTCTACTTGATCTTGCGGGCCATTACAGCCGTCTCTGGCGGTATCTTCTGGCGGCTGATGATTGGTACAATGGTCATGCTGGTTGGTGGTTATGCTGGCGAGGTGGGTTATATCGGCGCGTGGGCCGGATTCATCATCGGTATGGTCGGTTGGGCGTACATCCTGTATGAGATCTTTGCAGGTGAAGCCAGCCGGGTTGCGGCCGAACAGGCACCGCCATCAGTGCAGTCAGCCTTTTCAACAATGCGTTGGATCGTGACCATT LITVPLLMIEFYLILRAITAVSGGIFWRLMIGTMVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVAAEQAPPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACCGTGCCATTGCTGATGATCGAATTCTACTTGATCTTGCGGGCC---------ATT---ACAGCCGTCTCTGGC---GGTATC------------------------------------TTCTGGCGG---CTGATGATTGGTACAATGGTCATGCTGGTTGGTGGTTATGCTGGCGAG---------GTG------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------GGCGCG------------------TGGGCCGGA---TTCATCATCGGTATGGTCGGTTGGGCGTACATCCTGTATGAGATC---------------TTT------GCA---GGTGAAGCCAGCCGGGTTGCGGCCGAA------CAG---GCACCGCCATCAGTG---CAG---TCA---GCC---TTT---TCA---ACAATG---CGTTGGATCGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTMVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVAAE--Q-APPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926966 [III-Alpha3-a] PRGD_OTU004a_59ad26628413a7dd71968a0b9ab660f6 gb|KJ926966| PRGD_OTU004a_59ad26628413a7dd71968a0b9ab660f6, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_59ad26628413a7dd71968a0b9ab660f6, putative proteorhodopsin gene, partial cds. KJ926966 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTAATCACCGTGCCATTGCTGATGATCGAATTCTACTTGATCTTGAGGGCCATTACAGCCGTCTCTGGCGGTATCTTCTGGCGTCTGATGATTGGTACAATGGTCATGCTGGTCGGTGGTTATGCTGGCGAGGTGGGTTATATCGGCGCATGGGCCGGATTCATCATCGGTATGGTCGGTTGGGCGTACATCCTGTATGAGATCTTTGCGGGTGAAGCCAGTCGGGTCGCTGCCGAACAGGCGCCGCCATCAGTGCAGTCTGCCTTTTCAACAATGCGCTGGATTGTGACCATT LITVPLLMIEFYLILRAITAVSGGIFWRLMIGTMVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVAAEQAPPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACCGTGCCATTGCTGATGATCGAATTCTACTTGATCTTGAGGGCC---------ATT---ACAGCCGTCTCTGGC---GGTATC------------------------------------TTCTGGCGT---CTGATGATTGGTACAATGGTCATGCTGGTCGGTGGTTATGCTGGCGAG---------GTG------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------GGCGCA------------------TGGGCCGGA---TTCATCATCGGTATGGTCGGTTGGGCGTACATCCTGTATGAGATC---------------TTT------GCG---GGTGAAGCCAGTCGGGTCGCTGCCGAA------CAG---GCGCCGCCATCAGTG---CAG---TCT---GCC---TTT---TCA---ACAATG---CGCTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTMVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVAAE--Q-APPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ927002 [III-Alpha3-a] PRGD_OTU004a_b770af773b65440ac49f4715c56c9fa0 gb|KJ927002| PRGD_OTU004a_b770af773b65440ac49f4715c56c9fa0, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_b770af773b65440ac49f4715c56c9fa0, putative proteorhodopsin gene, partial cds. KJ927002 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTAATCACCGTGCCATTGCTGATGATCGAATTCTACTTGATCTTGAGGGCCATTACAGCCGTCTCTGGCGGAATTTTCTGGCGCCTGATGATTGGTACAATGGTCATGCTGGTCGGTGGGTATGCTGGCGAAGTGGGTTACATCGGCGCATGGGCCGGATTCATCATCGGTATGGTCGGTTGGGCGTACATCCTGTATGAGATCTTTGCAGGTGAAGCCAGCCGGGTTGCGGCCGAACAGGCACCGCCATCAGTGCAGTCAGCCTTTTCAACAATGCGCTGGATTGTGACTATT LITVPLLMIEFYLILRAITAVSGGIFWRLMIGTMVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVAAEQAPPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACCGTGCCATTGCTGATGATCGAATTCTACTTGATCTTGAGGGCC---------ATT---ACAGCCGTCTCTGGC---GGAATT------------------------------------TTCTGGCGC---CTGATGATTGGTACAATGGTCATGCTGGTCGGTGGGTATGCTGGCGAA---------GTG------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------GGCGCA------------------TGGGCCGGA---TTCATCATCGGTATGGTCGGTTGGGCGTACATCCTGTATGAGATC---------------TTT------GCA---GGTGAAGCCAGCCGGGTTGCGGCCGAA------CAG---GCACCGCCATCAGTG---CAG---TCA---GCC---TTT---TCA---ACAATG---CGCTGGATTGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTMVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVAAE--Q-APPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926998 [III-Alpha3-a] PRGD_OTU004a_b07c045e8420764c82cb1a7b0c5cd9bd gb|KJ926998| PRGD_OTU004a_b07c045e8420764c82cb1a7b0c5cd9bd, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_b07c045e8420764c82cb1a7b0c5cd9bd, putative proteorhodopsin gene, partial cds. KJ926998 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419) CTAATCACCGTGCCATTGCTGATGATCGAATTCTACTTGATCTTGCGGGCCATTACAGCCGTCTCTGGCGGTATCTTCTGGCGTCTGATGATTGGTACAATGGTCATGCTGGTCGGTGGTTATGCTGGCGAGGTGGGTTACATCGGCGCATGGGCCGGATTCATCATCGGTATGGTCGGTTGGGCGTACATCCTGTATGAAATCTTTGCAGGTGAAGCCAGCCGGGTTGCGGCCGAACAGGCACCGCCATCAGTGCAGTCAGCCTTTTCAACAATGCGTTGGATTGTGACCATT LITVPLLMIEFYLILRAITAVSGGIFWRLMIGTMVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVAAEQAPPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACCGTGCCATTGCTGATGATCGAATTCTACTTGATCTTGCGGGCC---------ATT---ACAGCCGTCTCTGGC---GGTATC------------------------------------TTCTGGCGT---CTGATGATTGGTACAATGGTCATGCTGGTCGGTGGTTATGCTGGCGAG---------GTG------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------GGCGCA------------------TGGGCCGGA---TTCATCATCGGTATGGTCGGTTGGGCGTACATCCTGTATGAAATC---------------TTT------GCA---GGTGAAGCCAGCCGGGTTGCGGCCGAA------CAG---GCACCGCCATCAGTG---CAG---TCA---GCC---TTT---TCA---ACAATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTMVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVAAE--Q-APPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ927006 [III-Alpha3-a] PRGD_OTU004a_bf8675f1781b70adc3f24a66bcd4f126 gb|KJ927006| PRGD_OTU004a_bf8675f1781b70adc3f24a66bcd4f126, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_bf8675f1781b70adc3f24a66bcd4f126, putative proteorhodopsin gene, partial cds. KJ927006 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATCACCGTGCCATTGCTGATGATCGAATTCTACTTGATCTTGCGGGCCATTACAGCCGTCTCTGGCGGTATCTTCTGGCGTCTGATGATTGGTACAATGGTCATGCTGGTTGGTGGCTATGCTGGCGAGGTGGGTTACATCGGCGCGTGGGCCGGTTTCATCATCGGTATGGTCGGTTGGGCGTACATCCTGTATGAGATCTTTGCAGGTGAAGCCAGCCGGGTTGCGGCAGAAAAGGCACCACCATCAGTGCAGTCAGCCTTTTCAACAATGCGTTGGATTGTGACCATT LITVPLLMIEFYLILRAITAVSGGIFWRLMIGTMVMLVGGYAGEVGYIGAWAGFIIGMVGWAYILYEIFAGEASRVAAEKAPPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACCGTGCCATTGCTGATGATCGAATTCTACTTGATCTTGCGGGCC---------ATT---ACAGCCGTCTCTGGC---GGTATC------------------------------------TTCTGGCGT---CTGATGATTGGTACAATGGTCATGCTGGTTGGTGGCTATGCTGGCGAG---------GTG------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------GGCGCG------------------TGGGCCGGT---TTCATCATCGGTATGGTCGGTTGGGCGTACATCCTGTATGAGATC---------------TTT------GCA---GGTGAAGCCAGCCGGGTTGCGGCAGAA------AAG---GCACCACCATCAGTG---CAG---TCA---GCC---TTT---TCA---ACAATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTMVMLVGGYAGE---V------G--Y-----------I----------------------GA------WAG-FIIGMVGWAYILYEI-----F--A-GEASRVAAE--K-APPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ927008 [III-Alpha3-a] PRGD_OTU004a_c45a733eb141db9325d55288522533bd gb|KJ927008| PRGD_OTU004a_c45a733eb141db9325d55288522533bd, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_c45a733eb141db9325d55288522533bd, putative proteorhodopsin gene, partial cds. KJ927008 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTGATCACGGTGCCATTATTGATGATCGAATTTTACTTGATCTTGCGGGCTATTACTGCCGTTTCTGGCGGAATATTCTGGCGTCTAATGATTGGTACTTTTGTGATGCTCGTCGGTGGTTATGCTGGCGAAATTGGCTATATCAGTGCATGGGCCGGTTTCATTATCGGCATGCTTGGTTGGGCCTACATTCTGTATGAAATCTTTGCAGGTGAAGCCAGCCGAGTAGCCGCGGAAAAAGCACCGCCATCAGTGCAATCAGCCTTTTCAACAATGCGTTGGATTGTTACCATT LITVPLLMIEFYLILRAITAVSGGIFWRLMIGTFVMLVGGYAGEIGYISAWAGFIIGMLGWAYILYEIFAGEASRVAAEKAPPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACGGTGCCATTATTGATGATCGAATTTTACTTGATCTTGCGGGCT---------ATT---ACTGCCGTTTCTGGC---GGAATA------------------------------------TTCTGGCGT---CTAATGATTGGTACTTTTGTGATGCTCGTCGGTGGTTATGCTGGCGAA---------ATT------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AGTGCA------------------TGGGCCGGT---TTCATTATCGGCATGCTTGGTTGGGCCTACATTCTGTATGAAATC---------------TTT------GCA---GGTGAAGCCAGCCGAGTAGCCGCGGAA------AAA---GCACCGCCATCAGTG---CAA---TCA---GCC---TTT---TCA---ACAATG---CGTTGGATTGTTACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTFVMLVGGYAGE---I------G--Y-----------I----------------------SA------WAG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--K-APPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ927023 [III-Alpha3-a] PRGD_OTU004a_d9eb87148218882c5d66f0790d461b34 gb|KJ927023| PRGD_OTU004a_d9eb87148218882c5d66f0790d461b34, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_d9eb87148218882c5d66f0790d461b34, putative proteorhodopsin gene, partial cds. KJ927023 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATCACGGTGCCATTACTGATGATCGAGTTTTACTTAATCTTGCGGGCTATTACTGCCGTTTCTGGCGGAATATTCTGGCGTCTGATGATTGGTACATTTGTGATGCTCGTCGGTGGTTATGCTGGCGAAATTGGCTATATCAGTGCATGGGCCGGTTTCATTATCGGCATGCTTGGTTGGGCCTACATTCTGTATGAAATCTTTGCAGGTGAAGCCAGCCGAGTAGCCGCGGAAAAAGCACCGCCATCAGTGCAATCAGCCTTTTCAACAATGCGTTGGATTGTTACCATT LITVPLLMIEFYLILRAITAVSGGIFWRLMIGTFVMLVGGYAGEIGYISAWAGFIIGMLGWAYILYEIFAGEASRVAAEKAPPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACGGTGCCATTACTGATGATCGAGTTTTACTTAATCTTGCGGGCT---------ATT---ACTGCCGTTTCTGGC---GGAATA------------------------------------TTCTGGCGT---CTGATGATTGGTACATTTGTGATGCTCGTCGGTGGTTATGCTGGCGAA---------ATT------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AGTGCA------------------TGGGCCGGT---TTCATTATCGGCATGCTTGGTTGGGCCTACATTCTGTATGAAATC---------------TTT------GCA---GGTGAAGCCAGCCGAGTAGCCGCGGAA------AAA---GCACCGCCATCAGTG---CAA---TCA---GCC---TTT---TCA---ACAATG---CGTTGGATTGTTACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTFVMLVGGYAGE---I------G--Y-----------I----------------------SA------WAG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--K-APPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ927022 [III-Alpha3-a] PRGD_OTU004a_d459845e60ec12fe955b3b857a969d3e gb|KJ927022| PRGD_OTU004a_d459845e60ec12fe955b3b857a969d3e, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_d459845e60ec12fe955b3b857a969d3e, putative proteorhodopsin gene, partial cds. KJ927022 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTGATCACGGTGCCATTACTGATGATCGAGTTTTACTTAATCTTGCGGGCTATTACTGCCGTTTCTGGCGGAATATTCTGGCGTCTGATGATTGGTACATTTGTGATGCTCGTCGGTGGTTATGCTGGTGAGATTGGTTATATCAGTGCATGGGCCGGTTTCATCATCGGCATGCTTGGTTGGGCCTATATTCTGTATGAAATCTTTGCAGGTGAAGCCAGCCGAGTAGCCGCGGAAAAAGCACCGCCATCAGTGCAATCAGCCTTTTCAACAATGCGTTGGATTGTTACGATT LITVPLLMIEFYLILRAITAVSGGIFWRLMIGTFVMLVGGYAGEIGYISAWAGFIIGMLGWAYILYEIFAGEASRVAAEKAPPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACGGTGCCATTACTGATGATCGAGTTTTACTTAATCTTGCGGGCT---------ATT---ACTGCCGTTTCTGGC---GGAATA------------------------------------TTCTGGCGT---CTGATGATTGGTACATTTGTGATGCTCGTCGGTGGTTATGCTGGTGAG---------ATT------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------AGTGCA------------------TGGGCCGGT---TTCATCATCGGCATGCTTGGTTGGGCCTATATTCTGTATGAAATC---------------TTT------GCA---GGTGAAGCCAGCCGAGTAGCCGCGGAA------AAA---GCACCGCCATCAGTG---CAA---TCA---GCC---TTT---TCA---ACAATG---CGTTGGATTGTTACGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTFVMLVGGYAGE---I------G--Y-----------I----------------------SA------WAG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--K-APPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926961 [III-Alpha3-a] PRGD_OTU004a_53c123918d671794148a2c4f2a0ec68d gb|KJ926961| PRGD_OTU004a_53c123918d671794148a2c4f2a0ec68d, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_53c123918d671794148a2c4f2a0ec68d, putative proteorhodopsin gene, partial cds. KJ926961 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -33.28, 45.35) CTGATCACGGTGCCATTACTGATGATCGAATTTTACTTGATCTTGCGGGCTATTACTGCCGTTTCTGGCGGAATATTCTGGCGTCTGATGATTGGTACATTTGTGATGCTCGTCGGTGGTTATGCTGGCGAAATTGGCTATATCAGTGCATGGGCCGGTTTCATCATCGGCATGCTTGGTTGGGCCTACATTCTGTATGAAATCTTTGCAGGTGAAGCCAGCCGAGTAGCCGCGGAAAAAGCACCGCCATCAGTGCAATCAGCCTTTTCAACAATGCGTTGGATTGTTACCATT LITVPLLMIEFYLILRAITAVSGGIFWRLMIGTFVMLVGGYAGEIGYISAWAGFIIGMLGWAYILYEIFAGEASRVAAEKAPPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACGGTGCCATTACTGATGATCGAATTTTACTTGATCTTGCGGGCT---------ATT---ACTGCCGTTTCTGGC---GGAATA------------------------------------TTCTGGCGT---CTGATGATTGGTACATTTGTGATGCTCGTCGGTGGTTATGCTGGCGAA---------ATT------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AGTGCA------------------TGGGCCGGT---TTCATCATCGGCATGCTTGGTTGGGCCTACATTCTGTATGAAATC---------------TTT------GCA---GGTGAAGCCAGCCGAGTAGCCGCGGAA------AAA---GCACCGCCATCAGTG---CAA---TCA---GCC---TTT---TCA---ACAATG---CGTTGGATTGTTACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTFVMLVGGYAGE---I------G--Y-----------I----------------------SA------WAG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--K-APPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926975 [III-Alpha3-a] PRGD_OTU004a_6a326242a1f76c7d3b72bde4a74c96fc gb|KJ926975| PRGD_OTU004a_6a326242a1f76c7d3b72bde4a74c96fc, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_6a326242a1f76c7d3b72bde4a74c96fc, putative proteorhodopsin gene, partial cds. KJ926975 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), Arctic Ocean-Atlantic side (73.9992, 19.2097), Arctic Ocean-Pacific side (69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) CTGATCACGGTGCCATTGCTGATGATCGAATTTTACTTGATCTTGCGGGCTATTACCGCCGTTTCTGGCGGAATATTCTGGCGTCTGATGATTGGTACGTTTGTGATGCTCGTCGGTGGTTATGCTGGTGAAATTGGCTACATCAGTGCATGGGCCGGTTTCATCATCGGAATGCTTGGCTGGGCCTACATTCTGTATGAAATCTTTGCAGGTGAAGCCAGCCGTGTTGCGGCAGAGCAAGCACCACCATCAGTGCAGTCAGCCTTTTCAACAATGCGTTGGATTGTGACCATT LITVPLLMIEFYLILRAITAVSGGIFWRLMIGTFVMLVGGYAGEIGYISAWAGFIIGMLGWAYILYEIFAGEASRVAAEQAPPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACGGTGCCATTGCTGATGATCGAATTTTACTTGATCTTGCGGGCT---------ATT---ACCGCCGTTTCTGGC---GGAATA------------------------------------TTCTGGCGT---CTGATGATTGGTACGTTTGTGATGCTCGTCGGTGGTTATGCTGGTGAA---------ATT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGTGCA------------------TGGGCCGGT---TTCATCATCGGAATGCTTGGCTGGGCCTACATTCTGTATGAAATC---------------TTT------GCA---GGTGAAGCCAGCCGTGTTGCGGCAGAG------CAA---GCACCACCATCAGTG---CAG---TCA---GCC---TTT---TCA---ACAATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTFVMLVGGYAGE---I------G--Y-----------I----------------------SA------WAG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--Q-APPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926940 [III-Alpha3-a] PRGD_OTU004a_23ed1ceee07b61d282401c08545e238f gb|KJ926940| PRGD_OTU004a_23ed1ceee07b61d282401c08545e238f, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_23ed1ceee07b61d282401c08545e238f, putative proteorhodopsin gene, partial cds. KJ926940 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683) CTGATCACCGTGCCATTGCTGATGATCGAATTCTACCTGATCTTGCGGGCCATTACAGCCGTTTCCGGCGGTATCTTCTGGCGTCTGATGATTGGTACATTTGTCATGCTGGTCGGTGGTTACGCTGGCGAGATTGGCTATATCAGTGCATGGGCCGGTTTCATCATCGGTATGCTTGGTTGGGCCTACATCTTGTATGAAATCTTTGCAGGTGAAGCCAGCCGTGTTGCGGCAGAGCAAGCACCACCATCAGTGCAGTCAGCCTTTTCAACAATGCGTTGGATTGTGACCATT LITVPLLMIEFYLILRAITAVSGGIFWRLMIGTFVMLVGGYAGEIGYISAWAGFIIGMLGWAYILYEIFAGEASRVAAEQAPPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTGCCATTGCTGATGATCGAATTCTACCTGATCTTGCGGGCC---------ATT---ACAGCCGTTTCCGGC---GGTATC------------------------------------TTCTGGCGT---CTGATGATTGGTACATTTGTCATGCTGGTCGGTGGTTACGCTGGCGAG---------ATT------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AGTGCA------------------TGGGCCGGT---TTCATCATCGGTATGCTTGGTTGGGCCTACATCTTGTATGAAATC---------------TTT------GCA---GGTGAAGCCAGCCGTGTTGCGGCAGAG------CAA---GCACCACCATCAGTG---CAG---TCA---GCC---TTT---TCA---ACAATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTFVMLVGGYAGE---I------G--Y-----------I----------------------SA------WAG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--Q-APPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926981 [III-Alpha3-a] PRGD_OTU004a_7c07cdd2857f89176f43593588f30958 gb|KJ926981| PRGD_OTU004a_7c07cdd2857f89176f43593588f30958, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_7c07cdd2857f89176f43593588f30958, putative proteorhodopsin gene, partial cds. KJ926981 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATCACCGTTCCATTGCTAATGATCGAATTCTACCTGATCTTGCGGGCCATTACAGCCGTCTCTGGCGGTATCTTCTGGCGTCTAATGATTGGTACATTTGTCATGCTGGTCGGTGGCTACGCTGGCGAGATTGGCTACATCAGCGCATGGGCCGGTTTCATTATCGGTATGCTTGGTTGGGCCTACATCTTGTATGAAATCTTTGCAGGTGAAGCCAGCCGTGTTGCGGCAGAGCAAGCACCACCATCAGTGCAGTCAGCCTTTTCAACAATGCGTTGGATTGTGACCATT LITVPLLMIEFYLILRAITAVSGGIFWRLMIGTFVMLVGGYAGEIGYISAWAGFIIGMLGWAYILYEIFAGEASRVAAEQAPPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTTCCATTGCTAATGATCGAATTCTACCTGATCTTGCGGGCC---------ATT---ACAGCCGTCTCTGGC---GGTATC------------------------------------TTCTGGCGT---CTAATGATTGGTACATTTGTCATGCTGGTCGGTGGCTACGCTGGCGAG---------ATT------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AGCGCA------------------TGGGCCGGT---TTCATTATCGGTATGCTTGGTTGGGCCTACATCTTGTATGAAATC---------------TTT------GCA---GGTGAAGCCAGCCGTGTTGCGGCAGAG------CAA---GCACCACCATCAGTG---CAG---TCA---GCC---TTT---TCA---ACAATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTFVMLVGGYAGE---I------G--Y-----------I----------------------SA------WAG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--Q-APPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ927019 [III-Alpha3-a] PRGD_OTU004a_d037a62a3d12e346bc1873da70e5f4e4 gb|KJ927019| PRGD_OTU004a_d037a62a3d12e346bc1873da70e5f4e4, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_d037a62a3d12e346bc1873da70e5f4e4, putative proteorhodopsin gene, partial cds. KJ927019 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (33.935, 18.508), Indian Ocean (-35.05, 23.73) CTGATCACCGTTCCATTGCTAATGATCGAATTCTACCTGATCTTGCGGGCCATTACAGCCGTCTCTGGCGGTATCTTTTGGCGTCTAATGATTGGTACATTTGTCATGCTGGTCGGTGGCTACGCTGGCGAGATTGGCTATATTAGCGCATGGGCCGGTTTCATTATCGGTATGCTTGGTTGGGCCTACATCTTGTATGAAATCTTCGCAGGTGAAGCCAGCCGTGTTGCGGCAGAGCAAGCACCACCATCAGTGCAGTCAGCCTTTTCAACAATGCGTTGGATTGTAACCATT LITVPLLMIEFYLILRAITAVSGGIFWRLMIGTFVMLVGGYAGEIGYISAWAGFIIGMLGWAYILYEIFAGEASRVAAEQAPPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTTCCATTGCTAATGATCGAATTCTACCTGATCTTGCGGGCC---------ATT---ACAGCCGTCTCTGGC---GGTATC------------------------------------TTTTGGCGT---CTAATGATTGGTACATTTGTCATGCTGGTCGGTGGCTACGCTGGCGAG---------ATT------------------GGC------TAT---------------------------------ATT------------------------------------------------------------------AGCGCA------------------TGGGCCGGT---TTCATTATCGGTATGCTTGGTTGGGCCTACATCTTGTATGAAATC---------------TTC------GCA---GGTGAAGCCAGCCGTGTTGCGGCAGAG------CAA---GCACCACCATCAGTG---CAG---TCA---GCC---TTT---TCA---ACAATG---CGTTGGATTGTAACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTFVMLVGGYAGE---I------G--Y-----------I----------------------SA------WAG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--Q-APPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926932 [III-Alpha3-a] PRGD_OTU004a_151829365c13085b3ff13e622dc5ef36 gb|KJ926932| PRGD_OTU004a_151829365c13085b3ff13e622dc5ef36, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_151829365c13085b3ff13e622dc5ef36, putative proteorhodopsin gene, partial cds. KJ926932 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) TTGATCACAGTGCCATTGCTGATGGTGGAATTCTATCTGATCCTGCGGGCGATTACCGCTGTATCAGGTGGCATTTTCTGGCGTTTGATGATCGGTACATTGGTCATGCTTATCGGCGGTTACGCTGGTGAGGTGGGCTACATCAATGCCTGGGTCGGTTTCATCATCGGAATGCTCGGTTGGGCTTACATCCTGTATGAAATCTTTGCCGGTGAAGCGAGCCGCGTGGCTGCTGAAAAAGCATCACCATCGGTTCAGTCTGCATTCTCAACAATGCGTTGGATTGTGACCATC LITVPLLMVEFYLILRAITAVSGGIFWRLMIGTLVMLIGGYAGEVGYINAWVGFIIGMLGWAYILYEIFAGEASRVAAEKASPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCATTGCTGATGGTGGAATTCTATCTGATCCTGCGGGCG---------ATT---ACCGCTGTATCAGGT---GGCATT------------------------------------TTCTGGCGT---TTGATGATCGGTACATTGGTCATGCTTATCGGCGGTTACGCTGGTGAG---------GTG------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCC------------------TGGGTCGGT---TTCATCATCGGAATGCTCGGTTGGGCTTACATCCTGTATGAAATC---------------TTT------GCC---GGTGAAGCGAGCCGCGTGGCTGCTGAA------AAA---GCATCACCATCGGTT---CAG---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GI------------FWR-LMIGTLVMLIGGYAGE---V------G--Y-----------I----------------------NA------WVG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--K-ASPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926965 [III-Alpha3-a] PRGD_OTU004a_5898a4533e5563eb784462c0b58f1a5d gb|KJ926965| PRGD_OTU004a_5898a4533e5563eb784462c0b58f1a5d, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_5898a4533e5563eb784462c0b58f1a5d, putative proteorhodopsin gene, partial cds. KJ926965 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683) TTGATCACAGTGCCATTGCTGATGGTTGAATTCTATCTGATCCTGCGGGCGATTACCGCTGTATCAGGTGGCATTTTCTGGCGTTTGATGATCGGTACATTGGTCATGCTTATCGGCGGTTACGCTGGTGAGGTGGGCTACATCAATGCCTGGGTCGGTTTCATCATCGGTATGCTCGGTTGGGCTTACATCCTGTATGAAATCTTTGCCGGTGAAGCGAGCCGCGTGGCTGCTGAAAAAGCATCACCATCGGTTCAGTCTGCATTCTCAACAATGCGTTGGATTGTGACCATC LITVPLLMVEFYLILRAITAVSGGIFWRLMIGTLVMLIGGYAGEVGYINAWVGFIIGMLGWAYILYEIFAGEASRVAAEKASPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCATTGCTGATGGTTGAATTCTATCTGATCCTGCGGGCG---------ATT---ACCGCTGTATCAGGT---GGCATT------------------------------------TTCTGGCGT---TTGATGATCGGTACATTGGTCATGCTTATCGGCGGTTACGCTGGTGAG---------GTG------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCC------------------TGGGTCGGT---TTCATCATCGGTATGCTCGGTTGGGCTTACATCCTGTATGAAATC---------------TTT------GCC---GGTGAAGCGAGCCGCGTGGCTGCTGAA------AAA---GCATCACCATCGGTT---CAG---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GI------------FWR-LMIGTLVMLIGGYAGE---V------G--Y-----------I----------------------NA------WVG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--K-ASPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926974 [III-Alpha3-a] PRGD_OTU004a_6914c01a608b7392275a2bfdac1bf9c7 gb|KJ926974| PRGD_OTU004a_6914c01a608b7392275a2bfdac1bf9c7, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_6914c01a608b7392275a2bfdac1bf9c7, putative proteorhodopsin gene, partial cds. KJ926974 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -33.9602, -73.3769), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45; -33.28, 45.35) TTGATCACAGTGCCATTGCTGATGGTTGAATTCTATCTGATCCTGCGGGCGATTACCGCTGTATCAGGTGGCATTTTCTGGCGTTTGATGATTGGTACATTGGTCATGCTTATCGGCGGTTACGCTGGTGAGGTGGGCTACATCAATGCCTGGGTCGGTTTCATCATCGGTATGCTCGGTTGGGCCTACATCCTGTATGAAATCTTTGCCGGTGAAGCGAGCCGTGTGGCTGCTGAAAAAGCATCACCATCGGTTCAGTCTGCATTCTCAACAATGCGTTGGATTGTGACCATC LITVPLLMVEFYLILRAITAVSGGIFWRLMIGTLVMLIGGYAGEVGYINAWVGFIIGMLGWAYILYEIFAGEASRVAAEKASPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCATTGCTGATGGTTGAATTCTATCTGATCCTGCGGGCG---------ATT---ACCGCTGTATCAGGT---GGCATT------------------------------------TTCTGGCGT---TTGATGATTGGTACATTGGTCATGCTTATCGGCGGTTACGCTGGTGAG---------GTG------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCC------------------TGGGTCGGT---TTCATCATCGGTATGCTCGGTTGGGCCTACATCCTGTATGAAATC---------------TTT------GCC---GGTGAAGCGAGCCGTGTGGCTGCTGAA------AAA---GCATCACCATCGGTT---CAG---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GI------------FWR-LMIGTLVMLIGGYAGE---V------G--Y-----------I----------------------NA------WVG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--K-ASPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ927030 [III-Alpha3-a] PRGD_OTU004a_ed99587a2bc4a2ad57160b879ebceef5 gb|KJ927030| PRGD_OTU004a_ed99587a2bc4a2ad57160b879ebceef5, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_ed99587a2bc4a2ad57160b879ebceef5, putative proteorhodopsin gene, partial cds. KJ927030 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACAGTGCCATTGCTGATGGTCGAATTCTATCTGATCTTGCGCGCAATTACCGCTGTATCAGGTGGCATTTTCTGGCGTTTGATGATCGGTACATTGGTCATGCTTATCGGCGGTTACGCTGGTGAGGTGGGCTACATCAATGCCTGGGTCGGTTTCATCATCGGTATGCTCGGTTGGGCCTACATCCTGTATGAAATCTTTGCCGGTGAAGCGAGCCGTGTGGCCGCTGAAAAAGCATCACCATCGGTTCAGTCTGCATTCTCAACAATGCGTTGGATTGTGACCATC LITVPLLMVEFYLILRAITAVSGGIFWRLMIGTLVMLIGGYAGEVGYINAWVGFIIGMLGWAYILYEIFAGEASRVAAEKASPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCATTGCTGATGGTCGAATTCTATCTGATCTTGCGCGCA---------ATT---ACCGCTGTATCAGGT---GGCATT------------------------------------TTCTGGCGT---TTGATGATCGGTACATTGGTCATGCTTATCGGCGGTTACGCTGGTGAG---------GTG------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCC------------------TGGGTCGGT---TTCATCATCGGTATGCTCGGTTGGGCCTACATCCTGTATGAAATC---------------TTT------GCC---GGTGAAGCGAGCCGTGTGGCCGCTGAA------AAA---GCATCACCATCGGTT---CAG---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GI------------FWR-LMIGTLVMLIGGYAGE---V------G--Y-----------I----------------------NA------WVG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--K-ASPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926922 [III-Alpha3-a] PRGD_OTU004a_otuREP_fdfe2d85a1865b5e8498bb54ccfa3a26 gb|KJ926922| PRGD_OTU004a_otuREP_fdfe2d85a1865b5e8498bb54ccfa3a26, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_otuREP_fdfe2d85a1865b5e8498bb54ccfa3a26, putative proteorhodopsin gene, partial cds. KJ926922 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATCACAGTGCCATTGCTGATGGTCGAATTCTATCTGATCCTGCGGGCAATTACCGCTGTATCAGGTGGCATTTTCTGGCGTTTGATGATCGGTACATTGGTCATGCTTATCGGCGGTTACGCTGGTGAGGTGGGCTACATCAATGCCTGGGTCGGTTTCATCATCGGTATGCTCGGTTGGGCCTACATCCTGTATGAAATTTTTGCCGGTGAAGCGAGCCGTGTGGCTGCTGAAAAAGCATCACCATCGGTTCAGTCTGCATTCTCAACAATGCGTTGGATCGTGACCATC LITVPLLMVEFYLILRAITAVSGGIFWRLMIGTLVMLIGGYAGEVGYINAWVGFIIGMLGWAYILYEIFAGEASRVAAEKASPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCATTGCTGATGGTCGAATTCTATCTGATCCTGCGGGCA---------ATT---ACCGCTGTATCAGGT---GGCATT------------------------------------TTCTGGCGT---TTGATGATCGGTACATTGGTCATGCTTATCGGCGGTTACGCTGGTGAG---------GTG------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCC------------------TGGGTCGGT---TTCATCATCGGTATGCTCGGTTGGGCCTACATCCTGTATGAAATT---------------TTT------GCC---GGTGAAGCGAGCCGTGTGGCTGCTGAA------AAA---GCATCACCATCGGTT---CAG---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATCGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GI------------FWR-LMIGTLVMLIGGYAGE---V------G--Y-----------I----------------------NA------WVG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--K-ASPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ927034 [III-Alpha3-a] PRGD_OTU004a_f57dd7cf000855905bcd01612b302566 gb|KJ927034| PRGD_OTU004a_f57dd7cf000855905bcd01612b302566, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_f57dd7cf000855905bcd01612b302566, putative proteorhodopsin gene, partial cds. KJ927034 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATCACAGTGCCATTGCTGATGGTTGAATTCTATCTGATTCTGAGGGCGATTACGGCTGTATCAGGTGGCATTTTCTGGCGTTTGATGATCGGTACATTGGTCATGCTCATCGGCGGTTACGCTGGTGAGGTGGGCTACATCAATGCCTGGGTCGGTTTCATCATCGGTATGCTCGGTTGGGCCTACATCCTATATGAAATCTTTGCCGGTGAAGCGAGCCGTGTTGCTGCTGAAAAAGCATCACCATCGGTTCAGTCTGCATTCTCAACAATGCGTTGGATTGTGACCATC LITVPLLMVEFYLILRAITAVSGGIFWRLMIGTLVMLIGGYAGEVGYINAWVGFIIGMLGWAYILYEIFAGEASRVAAEKASPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTGCCATTGCTGATGGTTGAATTCTATCTGATTCTGAGGGCG---------ATT---ACGGCTGTATCAGGT---GGCATT------------------------------------TTCTGGCGT---TTGATGATCGGTACATTGGTCATGCTCATCGGCGGTTACGCTGGTGAG---------GTG------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCC------------------TGGGTCGGT---TTCATCATCGGTATGCTCGGTTGGGCCTACATCCTATATGAAATC---------------TTT------GCC---GGTGAAGCGAGCCGTGTTGCTGCTGAA------AAA---GCATCACCATCGGTT---CAG---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GI------------FWR-LMIGTLVMLIGGYAGE---V------G--Y-----------I----------------------NA------WVG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--K-ASPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926994 [III-Alpha3-a] PRGD_OTU004a_9dab4ef79dc2316a8906cb257d69d021 gb|KJ926994| PRGD_OTU004a_9dab4ef79dc2316a8906cb257d69d021, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_9dab4ef79dc2316a8906cb257d69d021, putative proteorhodopsin gene, partial cds. KJ926994 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683) TTGATCACTGTGCCATTGCTGATGGTTGAATTCTATCTGATCCTGCGGGCGATTACCTCTGTATCAGGTGGCATTTTCTGGCGTTTGATGATTGGTACATTGGTCATGCTTATCGGCGGTTACGCTGGTGAGGTGGGCTATATCAATGCTTGGGTCGGTTTCATCATCGGTATGCTCGGTTGGGCCTACATCCTGTATGAAATCTTTGCCGGTGAAGCGAGCCGTGTGGCTGCTGAAAAAGCATCACCATCGGTTCAGTCTGCATTCTCAACAATGCGTTGGATTGTGACCATC LITVPLLMVEFYLILRAITSVSGGIFWRLMIGTLVMLIGGYAGEVGYINAWVGFIIGMLGWAYILYEIFAGEASRVAAEKASPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCATTGCTGATGGTTGAATTCTATCTGATCCTGCGGGCG---------ATT---ACCTCTGTATCAGGT---GGCATT------------------------------------TTCTGGCGT---TTGATGATTGGTACATTGGTCATGCTTATCGGCGGTTACGCTGGTGAG---------GTG------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AATGCT------------------TGGGTCGGT---TTCATCATCGGTATGCTCGGTTGGGCCTACATCCTGTATGAAATC---------------TTT------GCC---GGTGAAGCGAGCCGTGTGGCTGCTGAA------AAA---GCATCACCATCGGTT---CAG---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TSVSG-GI------------FWR-LMIGTLVMLIGGYAGE---V------G--Y-----------I----------------------NA------WVG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--K-ASPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926928 [III-Alpha3-a] PRGD_OTU004a_131885595c6c78fce4838720f3004a87 gb|KJ926928| PRGD_OTU004a_131885595c6c78fce4838720f3004a87, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_131885595c6c78fce4838720f3004a87, putative proteorhodopsin gene, partial cds. KJ926928 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTGATCACAGTGCCATTGCTGATGATTGAGTTTTATCTGATCCTGCGGGCGATTACCGCTGTGTCAGGTGGCATTTTCTGGCGTTTGATGGTCGGTACTCTGGTCATGCTTATCGGCGGTTACGCTGGTGAGGTAGGCTATATCAACGCATGGGTCGGTTTCATCATCGGTATGCTCGGTTGGGCCTACATCCTGTATGAAATCTTTGCCGGTGAAGCGAGCCGTGTGGCTGCTGAAAAAGCATCACCATCGGTTCAGTCTGCATTCTCAACAATGCGTTGGATTGTGACCATT LITVPLLMIEFYLILRAITAVSGGIFWRLMVGTLVMLIGGYAGEVGYINAWVGFIIGMLGWAYILYEIFAGEASRVAAEKASPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCATTGCTGATGATTGAGTTTTATCTGATCCTGCGGGCG---------ATT---ACCGCTGTGTCAGGT---GGCATT------------------------------------TTCTGGCGT---TTGATGGTCGGTACTCTGGTCATGCTTATCGGCGGTTACGCTGGTGAG---------GTA------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGTCGGT---TTCATCATCGGTATGCTCGGTTGGGCCTACATCCTGTATGAAATC---------------TTT------GCC---GGTGAAGCGAGCCGTGTGGCTGCTGAA------AAA---GCATCACCATCGGTT---CAG---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMVGTLVMLIGGYAGE---V------G--Y-----------I----------------------NA------WVG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--K-ASPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ927028 [III-Alpha3-a] PRGD_OTU004a_e63ddcfd57161f0f39e536c4652b9490 gb|KJ927028| PRGD_OTU004a_e63ddcfd57161f0f39e536c4652b9490, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_e63ddcfd57161f0f39e536c4652b9490, putative proteorhodopsin gene, partial cds. KJ927028 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTGATCACAGTGCCATTGCTGATGATTGAATTTTATCTGATTCTGCGGGCGATTACCGCTGTGTCAGGTGGCATTTTCTGGCGGTTGATGATAGGTACTCTGGTCATGCTTGTTGGCGGTTACGCTGGTGAGGTAGGCTACATCAATGCATGGGTCGGTTTCATCATCGGTATGCTCGGTTGGGCCTACATTCTGTATGAAATCTTTGCCGGTGAAGCGAGCCGTGTGGCTGCTGAAAAAGCATCACCATCGGTTCAGTCTGCATTCTCAACAATGCGTTGGATTGTGACCATC LITVPLLMIEFYLILRAITAVSGGIFWRLMIGTLVMLVGGYAGEVGYINAWVGFIIGMLGWAYILYEIFAGEASRVAAEKASPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCATTGCTGATGATTGAATTTTATCTGATTCTGCGGGCG---------ATT---ACCGCTGTGTCAGGT---GGCATT------------------------------------TTCTGGCGG---TTGATGATAGGTACTCTGGTCATGCTTGTTGGCGGTTACGCTGGTGAG---------GTA------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGTCGGT---TTCATCATCGGTATGCTCGGTTGGGCCTACATTCTGTATGAAATC---------------TTT------GCC---GGTGAAGCGAGCCGTGTGGCTGCTGAA------AAA---GCATCACCATCGGTT---CAG---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------NA------WVG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--K-ASPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926933 [III-Alpha3-a] PRGD_OTU004a_195ff6b5f3fbe55c2a7554f4f1503a86 gb|KJ926933| PRGD_OTU004a_195ff6b5f3fbe55c2a7554f4f1503a86, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_195ff6b5f3fbe55c2a7554f4f1503a86, putative proteorhodopsin gene, partial cds. KJ926933 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACAGTGCCATTGCTGATGATTGAATTTTATCTGATCCTGCGGGCGATTACCGCTGTGTCAGGCGGCATTTTCTGGCGTTTGATGATAGGTACTTTGGTCATGCTAATCGGCGGTTACGCTGGTGAGGTAGGCTATATCAACGCATGGGTTGGTTTCATCATCGGTATGCTCGGTTGGGCTTACATCCTTTATGAAATCTTTGCCGGTGAAGCGAGCCGTGTGGCTGCTGAAAAAGCATCACCATCGGTTCAGTCTGCATTCTCAACAATGCGTTGGATTGTGACCATC LITVPLLMIEFYLILRAITAVSGGIFWRLMIGTLVMLIGGYAGEVGYINAWVGFIIGMLGWAYILYEIFAGEASRVAAEKASPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCATTGCTGATGATTGAATTTTATCTGATCCTGCGGGCG---------ATT---ACCGCTGTGTCAGGC---GGCATT------------------------------------TTCTGGCGT---TTGATGATAGGTACTTTGGTCATGCTAATCGGCGGTTACGCTGGTGAG---------GTA------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGTTGGT---TTCATCATCGGTATGCTCGGTTGGGCTTACATCCTTTATGAAATC---------------TTT------GCC---GGTGAAGCGAGCCGTGTGGCTGCTGAA------AAA---GCATCACCATCGGTT---CAG---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTLVMLIGGYAGE---V------G--Y-----------I----------------------NA------WVG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--K-ASPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926929 [III-Alpha3-a] PRGD_OTU004a_13203baf6077da6c1d74825c1e3cc5d5 gb|KJ926929| PRGD_OTU004a_13203baf6077da6c1d74825c1e3cc5d5, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_13203baf6077da6c1d74825c1e3cc5d5, putative proteorhodopsin gene, partial cds. KJ926929 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) CTGATCACAGTGCCATTGCTGATGATCGAATTCTATCTGATCCTGCGGGCGATCACCGCTGTGTCAGGTGGCATTTTCTGGCGTTTGATGATCGGTACTCTGGTCATGCTTATCGGCGGTTACGCTGGTGAGGTAGGCTATATCAATGCATGGGTTGGTTTCATCATCGGTATGCTCGGTTGGGCCTACATCTTGTATGAAATCTTTGCCGGTGAAGCGAGCCGTGTTGCTGCTGAAAAAGCATCACCATCAGTGCAGTCTGCATTCTCAACAATGCGTTGGATCGTGACCATC LITVPLLMIEFYLILRAITAVSGGIFWRLMIGTLVMLIGGYAGEVGYINAWVGFIIGMLGWAYILYEIFAGEASRVAAEKASPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTGCCATTGCTGATGATCGAATTCTATCTGATCCTGCGGGCG---------ATC---ACCGCTGTGTCAGGT---GGCATT------------------------------------TTCTGGCGT---TTGATGATCGGTACTCTGGTCATGCTTATCGGCGGTTACGCTGGTGAG---------GTA------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGTTGGT---TTCATCATCGGTATGCTCGGTTGGGCCTACATCTTGTATGAAATC---------------TTT------GCC---GGTGAAGCGAGCCGTGTTGCTGCTGAA------AAA---GCATCACCATCAGTG---CAG---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATCGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTLVMLIGGYAGE---V------G--Y-----------I----------------------NA------WVG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--K-ASPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ927017 [III-Alpha3-a] PRGD_OTU004a_cdee82d5b76ee71e562e5abdcc089fd7 gb|KJ927017| PRGD_OTU004a_cdee82d5b76ee71e562e5abdcc089fd7, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_cdee82d5b76ee71e562e5abdcc089fd7, putative proteorhodopsin gene, partial cds. KJ927017 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTGATCACAGTGCCATTGCTGATGATCGAATTCTATCTGATTCTGCGGGCGATCACCGCTGTGTCAGGTGGCATTTTCTGGCGTTTGATGATCGGTACTCTGGTCATGCTTATCGGCGGTTACGCTGGTGAGGTAGGCTATATCAATGCATGGGTTGGTTTCATCATCGGTATGCTCGGTTGGGCCTACATCCTGTATGAAATCTTTGCCGGTGAAGCGAGCCGTGTTGCTGCTGAAAAAGCATCACCATCAGTGCAGTCTGCATTCTCAACAATGCGTTGGATCGTGACCATC LITVPLLMIEFYLILRAITAVSGGIFWRLMIGTLVMLIGGYAGEVGYINAWVGFIIGMLGWAYILYEIFAGEASRVAAEKASPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCATTGCTGATGATCGAATTCTATCTGATTCTGCGGGCG---------ATC---ACCGCTGTGTCAGGT---GGCATT------------------------------------TTCTGGCGT---TTGATGATCGGTACTCTGGTCATGCTTATCGGCGGTTACGCTGGTGAG---------GTA------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGTTGGT---TTCATCATCGGTATGCTCGGTTGGGCCTACATCCTGTATGAAATC---------------TTT------GCC---GGTGAAGCGAGCCGTGTTGCTGCTGAA------AAA---GCATCACCATCAGTG---CAG---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATCGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTLVMLIGGYAGE---V------G--Y-----------I----------------------NA------WVG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--K-ASPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ927009 [III-Alpha3-a] PRGD_OTU004a_c47b892bb588dcc8b6b24d453abbd88b gb|KJ927009| PRGD_OTU004a_c47b892bb588dcc8b6b24d453abbd88b, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_c47b892bb588dcc8b6b24d453abbd88b, putative proteorhodopsin gene, partial cds. KJ927009 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) TTGATCACAGTGCCATTGCTGATGATCGAATTCTATCTGATCCTGCGGGCGATTACCGCTGTGTCAGGTGGCATTTTCTGGCGTTTGATGATTGGTACTTTGGTCATGCTTATCGGCGGTTACGCTGGTGAGGTAGGCTATATCAATGCATGGGTTGGTTTCATCATCGGTATGCTCGGTTGGGCCTACATCCTATATGAAATTTTTGCAGGTGAAGCGAGCCGTGTTGCTGCTGAAAAGGCATCACCATCAGTGCAGTCTGCATTCTCAACAATGCGTTGGATTGTGACCATC LITVPLLMIEFYLILRAITAVSGGIFWRLMIGTLVMLIGGYAGEVGYINAWVGFIIGMLGWAYILYEIFAGEASRVAAEKASPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCATTGCTGATGATCGAATTCTATCTGATCCTGCGGGCG---------ATT---ACCGCTGTGTCAGGT---GGCATT------------------------------------TTCTGGCGT---TTGATGATTGGTACTTTGGTCATGCTTATCGGCGGTTACGCTGGTGAG---------GTA------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGTTGGT---TTCATCATCGGTATGCTCGGTTGGGCCTACATCCTATATGAAATT---------------TTT------GCA---GGTGAAGCGAGCCGTGTTGCTGCTGAA------AAG---GCATCACCATCAGTG---CAG---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTLVMLIGGYAGE---V------G--Y-----------I----------------------NA------WVG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--K-ASPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ927037 [III-Alpha3-a] PRGD_OTU004a_fc8dfb3df0ed67ef11b04030aab26124 gb|KJ927037| PRGD_OTU004a_fc8dfb3df0ed67ef11b04030aab26124, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_fc8dfb3df0ed67ef11b04030aab26124, putative proteorhodopsin gene, partial cds. KJ927037 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419) TTGATCACAGTGCCATTGCTGATGATCGAATTCTATCTGATCCTGCGGGCGATTACCGCTGTGTCAGGTGGCATTTTCTGGCGTTTGATGATTGGTACTCTGGTCATGCTTATCGGCGGTTACGCTGGTGAGGTAGGCTATATCAATGCATGGGTTGGTTTCATCATCGGTATGCTCGGTTGGGCCTACATCCTGTATGAAATTTTTGCTGGTGAAGCGAGCCGTGTTGCTGCTGAAAAGGCATCACCATCAGTGCAGTCTGCATTCTCAACAATGCGTTGGATTGTGACCATC LITVPLLMIEFYLILRAITAVSGGIFWRLMIGTLVMLIGGYAGEVGYINAWVGFIIGMLGWAYILYEIFAGEASRVAAEKASPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCATTGCTGATGATCGAATTCTATCTGATCCTGCGGGCG---------ATT---ACCGCTGTGTCAGGT---GGCATT------------------------------------TTCTGGCGT---TTGATGATTGGTACTCTGGTCATGCTTATCGGCGGTTACGCTGGTGAG---------GTA------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGTTGGT---TTCATCATCGGTATGCTCGGTTGGGCCTACATCCTGTATGAAATT---------------TTT------GCT---GGTGAAGCGAGCCGTGTTGCTGCTGAA------AAG---GCATCACCATCAGTG---CAG---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTLVMLIGGYAGE---V------G--Y-----------I----------------------NA------WVG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--K-ASPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ927024 [III-Alpha3-a] PRGD_OTU004a_dc121ef9057ecc0227ab097b80b7eaf3 gb|KJ927024| PRGD_OTU004a_dc121ef9057ecc0227ab097b80b7eaf3, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_dc121ef9057ecc0227ab097b80b7eaf3, putative proteorhodopsin gene, partial cds. KJ927024 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTGATCACAGTGCCATTGCTGATGATCGAATTCTATCTGATCCTGCGGGCGATCACCGCTGTGTCAGGTGGCATTTTCTGGCGTTTGATGATTGGTACATTGGTCATGCTTATCGGCGGTTACGCTGGTGAGGTAGGCTATATCAATGCATGGGTTGGTTTCATCATCGGTATGCTCGGTTGGGCCTACATCCTGTATGAAATCTTTGCTGGTGAAGCGAGCCGTGTTGCTGCTGAAAAAGCATCACCATCAGTGCAGTCAGCATTCTCAACAATGCGTTGGATTGTGACGATC LITVPLLMIEFYLILRAITAVSGGIFWRLMIGTLVMLIGGYAGEVGYINAWVGFIIGMLGWAYILYEIFAGEASRVAAEKASPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCATTGCTGATGATCGAATTCTATCTGATCCTGCGGGCG---------ATC---ACCGCTGTGTCAGGT---GGCATT------------------------------------TTCTGGCGT---TTGATGATTGGTACATTGGTCATGCTTATCGGCGGTTACGCTGGTGAG---------GTA------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGTTGGT---TTCATCATCGGTATGCTCGGTTGGGCCTACATCCTGTATGAAATC---------------TTT------GCT---GGTGAAGCGAGCCGTGTTGCTGCTGAA------AAA---GCATCACCATCAGTG---CAG---TCA---GCA---TTC---TCA---ACAATG---CGTTGGATTGTGACGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTLVMLIGGYAGE---V------G--Y-----------I----------------------NA------WVG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--K-ASPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926942 [III-Alpha3-a] PRGD_OTU004a_28d56c594f3081cd6b0d09f9e8045305 gb|KJ926942| PRGD_OTU004a_28d56c594f3081cd6b0d09f9e8045305, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_28d56c594f3081cd6b0d09f9e8045305, putative proteorhodopsin gene, partial cds. KJ926942 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACAGTGCCATTGCTGATGATCGAATTCTATCTGATCCTGCGGGCAATCACCGCTGTGTCAGGTGGCATTTTCTGGCGTCTGATGATTGGTACATTGGTCATGCTTGTCGGTGGTTACGCTGGCGAGGTGGGCTATATCAATGCATGGGTCGGTTTCATCATCGGTATGCTCGGTTGGGCCTACATCCTGTATGAAATCTTTGCCGGTGAAGCGAGCCGTGTTGCTGCTGAAAAAGCATCACCATCAGTGCAGTCTGCATTCTCAACAATGCGTTGGATTGTGACCATC LITVPLLMIEFYLILRAITAVSGGIFWRLMIGTLVMLVGGYAGEVGYINAWVGFIIGMLGWAYILYEIFAGEASRVAAEKASPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCATTGCTGATGATCGAATTCTATCTGATCCTGCGGGCA---------ATC---ACCGCTGTGTCAGGT---GGCATT------------------------------------TTCTGGCGT---CTGATGATTGGTACATTGGTCATGCTTGTCGGTGGTTACGCTGGCGAG---------GTG------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGTCGGT---TTCATCATCGGTATGCTCGGTTGGGCCTACATCCTGTATGAAATC---------------TTT------GCC---GGTGAAGCGAGCCGTGTTGCTGCTGAA------AAA---GCATCACCATCAGTG---CAG---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------NA------WVG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--K-ASPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926980 [III-Alpha3-a] PRGD_OTU004a_7aae462837304a9099d2b5371006b41e gb|KJ926980| PRGD_OTU004a_7aae462837304a9099d2b5371006b41e, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_7aae462837304a9099d2b5371006b41e, putative proteorhodopsin gene, partial cds. KJ926980 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACAGTGCCATTGCTGATGATCGAATTCTATCTGATCCTGCGGGCAATCACCGCTGTGTCAGGTGGCATTTTCTGGCGTTTGATGATTGGTACATTGGTCATGCTGGTCGGCGGTTACGCTGGCGAGGTGGGCTATATCAATGCATGGGTCGGTTTCATCATCGGTATGCTCGGTTGGGCCTACATCCTGTATGAAATCTTTGCCGGTGAAGCGAGCCGTGTTGCTGCTGAAAAAGCATCACCATCAGTGCAGTCTGCATTCTCAACAATGCGTTGGATTGTGACCATC LITVPLLMIEFYLILRAITAVSGGIFWRLMIGTLVMLVGGYAGEVGYINAWVGFIIGMLGWAYILYEIFAGEASRVAAEKASPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCATTGCTGATGATCGAATTCTATCTGATCCTGCGGGCA---------ATC---ACCGCTGTGTCAGGT---GGCATT------------------------------------TTCTGGCGT---TTGATGATTGGTACATTGGTCATGCTGGTCGGCGGTTACGCTGGCGAG---------GTG------------------GGC------TAT---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGTCGGT---TTCATCATCGGTATGCTCGGTTGGGCCTACATCCTGTATGAAATC---------------TTT------GCC---GGTGAAGCGAGCCGTGTTGCTGCTGAA------AAA---GCATCACCATCAGTG---CAG---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------NA------WVG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--K-ASPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926963 [III-Alpha3-a] PRGD_OTU004a_561ec4bfffd29933a73fb4c3c9a34cea gb|KJ926963| PRGD_OTU004a_561ec4bfffd29933a73fb4c3c9a34cea, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_561ec4bfffd29933a73fb4c3c9a34cea, putative proteorhodopsin gene, partial cds. KJ926963 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACAGTGCCATTGCTGATGATCGAATTCTATCTGATCCTGCGGGCAATCACCGCTGTGTCAGGTGGCATTTTCTGGCGTTTGATGATTGGTACATTGGTTATGCTTGTCGGCGGTTACGCTGGCGAGGTGGGCTACATCAATGCATGGGTCGGTTTCATCATCGGTATGCTCGGTTGGGCCTACATCCTTTATGAAATCTTTGCCGGTGAAGCGAGCCGTGTTGCTGCTGAAAAAGCATCACCATCAGTGCAGTCTGCATTCTCAACAATGCGGTGGATTGTGACCATC LITVPLLMIEFYLILRAITAVSGGIFWRLMIGTLVMLVGGYAGEVGYINAWVGFIIGMLGWAYILYEIFAGEASRVAAEKASPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCATTGCTGATGATCGAATTCTATCTGATCCTGCGGGCA---------ATC---ACCGCTGTGTCAGGT---GGCATT------------------------------------TTCTGGCGT---TTGATGATTGGTACATTGGTTATGCTTGTCGGCGGTTACGCTGGCGAG---------GTG------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGTCGGT---TTCATCATCGGTATGCTCGGTTGGGCCTACATCCTTTATGAAATC---------------TTT------GCC---GGTGAAGCGAGCCGTGTTGCTGCTGAA------AAA---GCATCACCATCAGTG---CAG---TCT---GCA---TTC---TCA---ACAATG---CGGTGGATTGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------NA------WVG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--K-ASPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926993 [III-Alpha3-a] PRGD_OTU004a_9b94970a94583f649b78dc581e6f2b00 gb|KJ926993| PRGD_OTU004a_9b94970a94583f649b78dc581e6f2b00, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_9b94970a94583f649b78dc581e6f2b00, putative proteorhodopsin gene, partial cds. KJ926993 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTGATCACGGTGCCATTGCTAATGATCGAATTCTATCTGATCCTGCGGGCAATCACCGCTGTGTCAGGTGGCATTTTCTGGCGTTTGATGATTGGTACATTGGTTATGCTTGTCGGCGGTTACGCTGGCGAGGTGGGCTACATCAATGCATGGGTCGGTTTCATCATCGGTATGCTCGGTTGGGCCTACATCCTTTATGAAATCTTTGCCGGTGAAGCGAGCCGTGTTGCTGCTGAAAAAGCATCACCATCAGTGCAGTCTGCATTCTCAACAATGCGTTGGATTGTGACCATC LITVPLLMIEFYLILRAITAVSGGIFWRLMIGTLVMLVGGYAGEVGYINAWVGFIIGMLGWAYILYEIFAGEASRVAAEKASPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACGGTGCCATTGCTAATGATCGAATTCTATCTGATCCTGCGGGCA---------ATC---ACCGCTGTGTCAGGT---GGCATT------------------------------------TTCTGGCGT---TTGATGATTGGTACATTGGTTATGCTTGTCGGCGGTTACGCTGGCGAG---------GTG------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGTCGGT---TTCATCATCGGTATGCTCGGTTGGGCCTACATCCTTTATGAAATC---------------TTT------GCC---GGTGAAGCGAGCCGTGTTGCTGCTGAA------AAA---GCATCACCATCAGTG---CAG---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------NA------WVG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--K-ASPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ927003 [III-Alpha3-a] PRGD_OTU004a_b9874eb58e4f9d9f8e30a69644a78752 gb|KJ927003| PRGD_OTU004a_b9874eb58e4f9d9f8e30a69644a78752, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_b9874eb58e4f9d9f8e30a69644a78752, putative proteorhodopsin gene, partial cds. KJ927003 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -33.28, 45.35) TTGATCACAGTGCCATTGCTGATGATCGAATTCTATCTGATCCTGCGGGCAATCACCGCTGTGTCAGGTGGCATTTTTTGGCGTTTAATGATTGGTACATTGGTCATGCTTGTCGGCGGTTACGCTGGCGAGGTGGGCTACATCAATGCATGGGTCGGTTTCATCATCGGTATGCTCGGTTGGGCCTACATTTTGTATGAAATCTTTGCCGGTGAAGCGAGCCGTGTTGCTGCTGAGAAAGCATCGCCATCAGTACAGTCTGCATTCTCAACAATGCGTTGGATTGTGACCATC LITVPLLMIEFYLILRAITAVSGGIFWRLMIGTLVMLVGGYAGEVGYINAWVGFIIGMLGWAYILYEIFAGEASRVAAEKASPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCATTGCTGATGATCGAATTCTATCTGATCCTGCGGGCA---------ATC---ACCGCTGTGTCAGGT---GGCATT------------------------------------TTTTGGCGT---TTAATGATTGGTACATTGGTCATGCTTGTCGGCGGTTACGCTGGCGAG---------GTG------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGTCGGT---TTCATCATCGGTATGCTCGGTTGGGCCTACATTTTGTATGAAATC---------------TTT------GCC---GGTGAAGCGAGCCGTGTTGCTGCTGAG------AAA---GCATCGCCATCAGTA---CAG---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------NA------WVG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--K-ASPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ927011 [III-Alpha3-a] PRGD_OTU004a_c6dd4e0315405b613f3fbaebd2ae9133 gb|KJ927011| PRGD_OTU004a_c6dd4e0315405b613f3fbaebd2ae9133, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_c6dd4e0315405b613f3fbaebd2ae9133, putative proteorhodopsin gene, partial cds. KJ927011 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTGATCACAGTGCCATTGCTGATGATCGAATTCTATCTGATACTGCGGGCAATCACCGCTGTGTCAGGTGGCATTTTCTGGCGTCTGATGATTGGTACATTGGTCATGCTTGTCGGCGGTTACGCTGGCGAGGTGGGCTACATCAATGCATGGGTCGGTTTCATCATTGGTATGCTCGGTTGGGCCTACATCCTGTATGAAATCTTTGCCGGTGAAGCGAGCCGTGTTGCTGCTGAAAAGGCATCACCATCAGTACAGTCTGCATTCTCAACAATGCGTTGGATTGTGACCATC LITVPLLMIEFYLILRAITAVSGGIFWRLMIGTLVMLVGGYAGEVGYINAWVGFIIGMLGWAYILYEIFAGEASRVAAEKASPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCATTGCTGATGATCGAATTCTATCTGATACTGCGGGCA---------ATC---ACCGCTGTGTCAGGT---GGCATT------------------------------------TTCTGGCGT---CTGATGATTGGTACATTGGTCATGCTTGTCGGCGGTTACGCTGGCGAG---------GTG------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGTCGGT---TTCATCATTGGTATGCTCGGTTGGGCCTACATCCTGTATGAAATC---------------TTT------GCC---GGTGAAGCGAGCCGTGTTGCTGCTGAA------AAG---GCATCACCATCAGTA---CAG---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------NA------WVG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--K-ASPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926945 [III-Alpha3-a] PRGD_OTU004a_2e614e01778b35781f084b327a862caa gb|KJ926945| PRGD_OTU004a_2e614e01778b35781f084b327a862caa, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_2e614e01778b35781f084b327a862caa, putative proteorhodopsin gene, partial cds. KJ926945 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACAGTGCCATTGCTGATGATCGAATTCTATCTGATCCTGCGGGCAATCACCGCTGTGTCAGGTGGCATTTTCTGGCGTTTGATGATCGGTACATTGGTCATGCTTGTCGGCGGTTACGCTGGCGAGGTGGGCTACATTAATGCATGGGTTGGTTTCATCATCGGTATGCTCGGCTGGGCCTACATCCTGTACGAAATCTTTGCCGGTGAAGCGAGCCGTGTTGCTGCGGAAAAAGCATCACCATCAGTGCAGTCTGCATTCTCAACAATGCGTTGGATTGTAACCATC LITVPLLMIEFYLILRAITAVSGGIFWRLMIGTLVMLVGGYAGEVGYINAWVGFIIGMLGWAYILYEIFAGEASRVAAEKASPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCATTGCTGATGATCGAATTCTATCTGATCCTGCGGGCA---------ATC---ACCGCTGTGTCAGGT---GGCATT------------------------------------TTCTGGCGT---TTGATGATCGGTACATTGGTCATGCTTGTCGGCGGTTACGCTGGCGAG---------GTG------------------GGC------TAC---------------------------------ATT------------------------------------------------------------------AATGCA------------------TGGGTTGGT---TTCATCATCGGTATGCTCGGCTGGGCCTACATCCTGTACGAAATC---------------TTT------GCC---GGTGAAGCGAGCCGTGTTGCTGCGGAA------AAA---GCATCACCATCAGTG---CAG---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTAACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------NA------WVG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--K-ASPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926954 [III-Alpha3-a] PRGD_OTU004a_467606c6a37a464c851f2f50f79d5f72 gb|KJ926954| PRGD_OTU004a_467606c6a37a464c851f2f50f79d5f72, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_467606c6a37a464c851f2f50f79d5f72, putative proteorhodopsin gene, partial cds. KJ926954 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097), English Channel (48.7717, -3.9683) TTGATCACAGTGCCATTGCTGATGATCGAATTCTATCTGATCCTGCGGGCAATCACCGCTGTGTCAGGTGGCATTTTCTGGCGTTTGATGATCGGTACATTGGTCATGCTTGTCGGCGGTTACGCTGGCGAGGTGGGCTACATTAATGCATGGGTTGGTTTCATCATCGGTATGCTCGGTTGGGCCTACATCCTGTACGAAATCTTTGCCGGTGAAGCGAGCCGTGTTGCTGCGGAAAAAGCATCACCATCAGTGCAGTCTGCATTCTCAACAATGCGTTGGATTGTGACCATC LITVPLLMIEFYLILRAITAVSGGIFWRLMIGTLVMLVGGYAGEVGYINAWVGFIIGMLGWAYILYEIFAGEASRVAAEKASPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCATTGCTGATGATCGAATTCTATCTGATCCTGCGGGCA---------ATC---ACCGCTGTGTCAGGT---GGCATT------------------------------------TTCTGGCGT---TTGATGATCGGTACATTGGTCATGCTTGTCGGCGGTTACGCTGGCGAG---------GTG------------------GGC------TAC---------------------------------ATT------------------------------------------------------------------AATGCA------------------TGGGTTGGT---TTCATCATCGGTATGCTCGGTTGGGCCTACATCCTGTACGAAATC---------------TTT------GCC---GGTGAAGCGAGCCGTGTTGCTGCGGAA------AAA---GCATCACCATCAGTG---CAG---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------NA------WVG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--K-ASPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ927005 [III-Alpha3-a] PRGD_OTU004a_bc93fb5045bb9aa025837fb3651149b9 gb|KJ927005| PRGD_OTU004a_bc93fb5045bb9aa025837fb3651149b9, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_bc93fb5045bb9aa025837fb3651149b9, putative proteorhodopsin gene, partial cds. KJ927005 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACAGTGCCATTGCTGATGATCGAATTCTATCTGATCCTGCGGGCAATCACCGCTGTGTCAGGTGGCATTTTCTGGCGTTTGATGATTGGTACATTGGTCATGCTTATCGGCGGTTACGCTGGCGAGGTGGGCTACATCAATGCATGGGTTGGTTTCATCATCGGTATGCTCGGTTGGGCCTACATCCTGTACGAAATCTTTGCCGGTGAAGCGAGCCGTGTTGCTGCTGAAAAAGCATCACCATCAGTGCAGTCTGCATTCTCAACAATGCGTTGGATTGTGACCATC LITVPLLMIEFYLILRAITAVSGGIFWRLMIGTLVMLIGGYAGEVGYINAWVGFIIGMLGWAYILYEIFAGEASRVAAEKASPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCATTGCTGATGATCGAATTCTATCTGATCCTGCGGGCA---------ATC---ACCGCTGTGTCAGGT---GGCATT------------------------------------TTCTGGCGT---TTGATGATTGGTACATTGGTCATGCTTATCGGCGGTTACGCTGGCGAG---------GTG------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGTTGGT---TTCATCATCGGTATGCTCGGTTGGGCCTACATCCTGTACGAAATC---------------TTT------GCC---GGTGAAGCGAGCCGTGTTGCTGCTGAA------AAA---GCATCACCATCAGTG---CAG---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTLVMLIGGYAGE---V------G--Y-----------I----------------------NA------WVG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--K-ASPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926987 [III-Alpha3-a] PRGD_OTU004a_8b5fc9a86e37d148c001de37c1e52e04 gb|KJ926987| PRGD_OTU004a_8b5fc9a86e37d148c001de37c1e52e04, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_8b5fc9a86e37d148c001de37c1e52e04, putative proteorhodopsin gene, partial cds. KJ926987 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) TTGATCACAGTGCCATTGCTGATGATCGAATTCTATCTGATCCTGCGGGCAATCACCGCTGTGTCAGGTGGCATTTTCTGGCGTTTGATGATTGGTACATTGGTCATGCTTGTCGGCGGTTACGCTGGCGAGGTGGGCTACATCAACGCATGGGTCGGTTTCATCATCGGTATGCTCGGTTGGGCCTACATCCTGTATGAAATCTTTGCCGGTGAAGCGAGCCGTGTTGCTGCTGAAAAAGCATCACCATCAGTGCAGTCTGCATTCTCAACAATGCGTTGGATTGTGACCATC LITVPLLMIEFYLILRAITAVSGGIFWRLMIGTLVMLVGGYAGEVGYINAWVGFIIGMLGWAYILYEIFAGEASRVAAEKASPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCATTGCTGATGATCGAATTCTATCTGATCCTGCGGGCA---------ATC---ACCGCTGTGTCAGGT---GGCATT------------------------------------TTCTGGCGT---TTGATGATTGGTACATTGGTCATGCTTGTCGGCGGTTACGCTGGCGAG---------GTG------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AACGCA------------------TGGGTCGGT---TTCATCATCGGTATGCTCGGTTGGGCCTACATCCTGTATGAAATC---------------TTT------GCC---GGTGAAGCGAGCCGTGTTGCTGCTGAA------AAA---GCATCACCATCAGTG---CAG---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------NA------WVG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--K-ASPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926982 [III-Alpha3-a] PRGD_OTU004a_7cdbe6ac6ef826e19f1c1a97d14a7101 gb|KJ926982| PRGD_OTU004a_7cdbe6ac6ef826e19f1c1a97d14a7101, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_7cdbe6ac6ef826e19f1c1a97d14a7101, putative proteorhodopsin gene, partial cds. KJ926982 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACAGTACCATTGCTGATGATCGAATTCTATCTGATCCTGCGGGCGATTACCGCTGTGTCAGGCGGCATTTTCTGGCGTTTGATGATCGGTACTCTGGTCATGCTTGTCGGCGGTTATGCTGGTGAGGTCGGCTACATCAATGCATGGGTTGGTTTCATCATCGGTATGCTCGGTTGGGCCTACATCCTGTATGAAATCTTTGCCGGTGAAGCGAGCCGTGTGGCTGCTGAAAAAGCATCTCCATCGGTTCAGTCTGCATTCTCAACAATGCGCTGGATTGTGACCATC LITVPLLMIEFYLILRAITAVSGGIFWRLMIGTLVMLVGGYAGEVGYINAWVGFIIGMLGWAYILYEIFAGEASRVAAEKASPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTACCATTGCTGATGATCGAATTCTATCTGATCCTGCGGGCG---------ATT---ACCGCTGTGTCAGGC---GGCATT------------------------------------TTCTGGCGT---TTGATGATCGGTACTCTGGTCATGCTTGTCGGCGGTTATGCTGGTGAG---------GTC------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGTTGGT---TTCATCATCGGTATGCTCGGTTGGGCCTACATCCTGTATGAAATC---------------TTT------GCC---GGTGAAGCGAGCCGTGTGGCTGCTGAA------AAA---GCATCTCCATCGGTT---CAG---TCT---GCA---TTC---TCA---ACAATG---CGCTGGATTGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------NA------WVG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--K-ASPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926983 [III-Alpha3-a] PRGD_OTU004a_7efcf9678748134bb2ab8e109506bc06 gb|KJ926983| PRGD_OTU004a_7efcf9678748134bb2ab8e109506bc06, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_7efcf9678748134bb2ab8e109506bc06, putative proteorhodopsin gene, partial cds. KJ926983 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACAGTGCCATTGCTTATGATCGAATTCTATCTGATCTTGCGGGCGATTACCGCTGTGTCAGGCGGCATTTTCTGGCGTTTGATGATTGGTACTCTGGTCATGCTTGTCGGCGGTTACGCCGGCGAGGTGGGCTACATCAATGCATGGGTTGGTTTTATCATCGGCATGCTCGGTTGGGCCTACATTCTGTACGAGATCTTTGCCGGTGAAGCGAGCCGTGTTGCTGCTGAAAAAGCATCACCATCGGTTCAGTCTGCATTCTCAACAATGCGGTGGATTGTGACCATC LITVPLLMIEFYLILRAITAVSGGIFWRLMIGTLVMLVGGYAGEVGYINAWVGFIIGMLGWAYILYEIFAGEASRVAAEKASPSVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCATTGCTTATGATCGAATTCTATCTGATCTTGCGGGCG---------ATT---ACCGCTGTGTCAGGC---GGCATT------------------------------------TTCTGGCGT---TTGATGATTGGTACTCTGGTCATGCTTGTCGGCGGTTACGCCGGCGAG---------GTG------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGTTGGT---TTTATCATCGGCATGCTCGGTTGGGCCTACATTCTGTACGAGATC---------------TTT------GCC---GGTGAAGCGAGCCGTGTTGCTGCTGAA------AAA---GCATCACCATCGGTT---CAG---TCT---GCA---TTC---TCA---ACAATG---CGGTGGATTGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------NA------WVG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--K-ASPSV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926977 [III-Alpha3-a] PRGD_OTU004a_72ccdc9948d60579a4383c3a976fd69e gb|KJ926977| PRGD_OTU004a_72ccdc9948d60579a4383c3a976fd69e, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_72ccdc9948d60579a4383c3a976fd69e, putative proteorhodopsin gene, partial cds. KJ926977 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683) CTGATCACCGTGCCATTGCTGATGGTTGAGTTCTACTTGATTCTGCGGGCTATTACAGCCGTATCTGGTGGAATTTTCTGGCGCTTGATGATTGGTACAGTGGTTATGCTTGTTGGCGGTTATGCCGGCGAAATTGGTTACATTAGTGCCTGGGCTGGATTCATAATTGGAATGCTCGGTTGGGCATATATCCTCTATGAAATCTTTGCCGGTGAAGCTAGCCGTGTAGCGGCAGAACAAGCACCTGCTTCAGTTCAGTCAGCGTTCTCAACAATGCGCTGGATTGTAACCATC LITVPLLMVEFYLILRAITAVSGGIFWRLMIGTVVMLVGGYAGEIGYISAWAGFIIGMLGWAYILYEIFAGEASRVAAEQAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTGCCATTGCTGATGGTTGAGTTCTACTTGATTCTGCGGGCT---------ATT---ACAGCCGTATCTGGT---GGAATT------------------------------------TTCTGGCGC---TTGATGATTGGTACAGTGGTTATGCTTGTTGGCGGTTATGCCGGCGAA---------ATT------------------GGT------TAC---------------------------------ATT------------------------------------------------------------------AGTGCC------------------TGGGCTGGA---TTCATAATTGGAATGCTCGGTTGGGCATATATCCTCTATGAAATC---------------TTT------GCC---GGTGAAGCTAGCCGTGTAGCGGCAGAA------CAA---GCACCTGCTTCAGTT---CAG---TCA---GCG---TTC---TCA---ACAATG---CGCTGGATTGTAACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GI------------FWR-LMIGTVVMLVGGYAGE---I------G--Y-----------I----------------------SA------WAG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--Q-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ927038 [III-Alpha3-a] PRGD_OTU004a_ffc14610cb530e9b0a43639b8170f922 gb|KJ927038| PRGD_OTU004a_ffc14610cb530e9b0a43639b8170f922, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_ffc14610cb530e9b0a43639b8170f922, putative proteorhodopsin gene, partial cds. KJ927038 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683) CTGATCACCGTGCCTTTACTTATGGTTGAGTTCTACTTGATTTTGCGGGCTATCACCGCCGTATCTGGTGGAATTTTCTGGCGCTTAATGGTTGGTACAGTGGTTATGCTTGTTGGCGGTTATGCTGGTGAAATTGGTTACATCAGTGCCTGGGCTGGTTTCATAATCGGGATGCTAGGTTGGGCATATATTCTCTATGAAATCTTTGCTGGTGAAGCTAGCCGTGTGGCGGCAGAAAAAGCACCTGCTTCAGTTCAGTCAGCATTTTCAACAATGCGCTGGATTGTAACCATC LITVPLLMVEFYLILRAITAVSGGIFWRLMVGTVVMLVGGYAGEIGYISAWAGFIIGMLGWAYILYEIFAGEASRVAAEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTGCCTTTACTTATGGTTGAGTTCTACTTGATTTTGCGGGCT---------ATC---ACCGCCGTATCTGGT---GGAATT------------------------------------TTCTGGCGC---TTAATGGTTGGTACAGTGGTTATGCTTGTTGGCGGTTATGCTGGTGAA---------ATT------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AGTGCC------------------TGGGCTGGT---TTCATAATCGGGATGCTAGGTTGGGCATATATTCTCTATGAAATC---------------TTT------GCT---GGTGAAGCTAGCCGTGTGGCGGCAGAA------AAA---GCACCTGCTTCAGTT---CAG---TCA---GCA---TTT---TCA---ACAATG---CGCTGGATTGTAACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TAVSG-GI------------FWR-LMVGTVVMLVGGYAGE---I------G--Y-----------I----------------------SA------WAG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ927020 [III-Alpha3-a] PRGD_OTU004a_d082f3f74c5628ce46c522a96ffaebe6 gb|KJ927020| PRGD_OTU004a_d082f3f74c5628ce46c522a96ffaebe6, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_d082f3f74c5628ce46c522a96ffaebe6, putative proteorhodopsin gene, partial cds. KJ927020 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683) CTGATCACAGTTCCATTGCTGATGATTGAATTCTACTTAATTTTGCGAGCGATTACCGCAGTGTCTGGAGGTATTTTCTGGCGCTTGATGATCGGCACTTTGGTTATGCTTCTTGGTGGTTACGCTGGCGAAATTGGTTACATCAATGCATGGGCAGGTTTCATCATTGGCATGCTTGGTTGGGCTTACATCCTGTATGAAATTTTCGCAGGTGAAGCTAGTCGAGTTGCGGCTGAAAAGGCTTCGGCATCAGTCCAGTCCGCATTCTCAACAATGCGCTGGATCGTCACAATT LITVPLLMIEFYLILRAITAVSGGIFWRLMIGTLVMLLGGYAGEIGYINAWAGFIIGMLGWAYILYEIFAGEASRVAAEKASASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTTCCATTGCTGATGATTGAATTCTACTTAATTTTGCGAGCG---------ATT---ACCGCAGTGTCTGGA---GGTATT------------------------------------TTCTGGCGC---TTGATGATCGGCACTTTGGTTATGCTTCTTGGTGGTTACGCTGGCGAA---------ATT------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGCAGGT---TTCATCATTGGCATGCTTGGTTGGGCTTACATCCTGTATGAAATT---------------TTC------GCA---GGTGAAGCTAGTCGAGTTGCGGCTGAA------AAG---GCTTCGGCATCAGTC---CAG---TCC---GCA---TTC---TCA---ACAATG---CGCTGGATCGTCACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LMIGTLVMLLGGYAGE---I------G--Y-----------I----------------------NA------WAG-FIIGMLGWAYILYEI-----F--A-GEASRVAAE--K-ASASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-a]_KJ926999 [III-Alpha3-a] PRGD_OTU004a_b0bd1244b345315fc91999cac1cbf92e gb|KJ926999| PRGD_OTU004a_b0bd1244b345315fc91999cac1cbf92e, putative proteorhodopsin gene, partial cds. PRGD_OTU004a_b0bd1244b345315fc91999cac1cbf92e, putative proteorhodopsin gene, partial cds. KJ926999 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683) TTGATCACTGTTCCATTGCTAATGATCGAATTCTACCTAATCCTTCGTGCAATTGCGAACGTATCAGGCGGTATTTTCTGGCGCCTAATGATTGGTACATTCGTAATGCTAGTCGGTGGTTATGCTGGCGAAATCGGTTACATCAATGCATGGGTCGGCTTCATCATCGGTATGGCAGGTTGGGCATACATCCTGTATGAAATCTTTGCTGGTGAAGCAAGCCGCGTTGCCGCTGAAAAAGCTCCTGCATCAGTTCAGTCAGCTTTCTCAACCATGCGTTGGATTGTGACAATT LITVPLLMIEFYLILRAIANVSGGIFWRLMIGTFVMLVGGYAGEIGYINAWVGFIIGMAGWAYILYEIFAGEASRVAAEKAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTTCCATTGCTAATGATCGAATTCTACCTAATCCTTCGTGCA---------ATT---GCGAACGTATCAGGC---GGTATT------------------------------------TTCTGGCGC---CTAATGATTGGTACATTCGTAATGCTAGTCGGTGGTTATGCTGGCGAA---------ATC------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGTCGGC---TTCATCATCGGTATGGCAGGTTGGGCATACATCCTGTATGAAATC---------------TTT------GCT---GGTGAAGCAAGCCGCGTTGCCGCTGAA------AAA---GCTCCTGCATCAGTT---CAG---TCA---GCT---TTC---TCA---ACCATG---CGTTGGATTGTGACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-ANVSG-GI------------FWR-LMIGTFVMLVGGYAGE---I------G--Y-----------I----------------------NA------WVG-FIIGMAGWAYILYEI-----F--A-GEASRVAAE--K-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-HTCC2255]_KJ927046 [III-Alpha3-HTCC2255] PRGD_OTU004b_95a515e950bacc3267ed64bda14e62f9 gb|KJ927046| PRGD_OTU004b_95a515e950bacc3267ed64bda14e62f9, putative proteorhodopsin gene, partial cds. PRGD_OTU004b_95a515e950bacc3267ed64bda14e62f9, putative proteorhodopsin gene, partial cds. KJ927046 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/HTCC2255 Rhodobacterales-like]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 HTCC2255 Rhodobacterales-like proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTTTACGCGCAATTACTAACGTATCGCAAGGTATCTTCTGGCGCTTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAGATCGGTTATATCAGTGCAACTTTAGGATTCATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATCTTTGCAGGTGAAGCTAGTAAGGTTGCTGCAGATGAGGCCCCAGCTTCTGTTCAATCAGCTTTCTCAACAATGCGTTGGATTGTGACGATT LITVPLLMVEFYLILRAITNVSQGIFWRLMIGTVVMLVGGYAGEIGYISATLGFIIGMLGWAYILYEIFAGEASKVAADEAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTTTACGCGCA---------ATT---ACTAACGTATCGCAA---GGTATC------------------------------------TTCTGGCGC---TTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAG---------ATC------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------AGTGCA------------------ACTTTAGGA---TTCATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGTAAGGTTGCTGCAGAT------GAG---GCCCCAGCTTCTGTT---CAA---TCA---GCT---TTC---TCA---ACAATG---CGTTGGATTGTGACGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSQ-GI------------FWR-LMIGTVVMLVGGYAGE---I------G--Y-----------I----------------------SA------TLG-FIIGMLGWAYILYEI-----F--A-GEASKVAAD--E-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-HTCC2255]_KJ927039 [III-Alpha3-HTCC2255] PRGD_OTU004b_otuREP_4792ffe33cfdea1178ba6b2616689e82 gb|KJ927039| PRGD_OTU004b_otuREP_4792ffe33cfdea1178ba6b2616689e82, putative proteorhodopsin gene, partial cds. PRGD_OTU004b_otuREP_4792ffe33cfdea1178ba6b2616689e82, putative proteorhodopsin gene, partial cds. KJ927039 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/HTCC2255 Rhodobacterales-like]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 HTCC2255 Rhodobacterales-like proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATTACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTTTACGCGCAATTACTAACGTATCGCAAGGTATCTTCTGGCGCTTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAGATTGGTTATATCAGTGCAACTTTAGGATTCATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATCTTTGCAGGTGAAGCTAGTAAAGTTGCTGCAGATGAGGCCCCGGCTTCTGTTCAATCAGCTTTCTCAACAATGCGTTGGATTGTGACGATT LITVPLLMVEFYLILRAITNVSQGIFWRLMIGTVVMLVGGYAGEIGYISATLGFIIGMLGWAYILYEIFAGEASKVAADEAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTTTACGCGCA---------ATT---ACTAACGTATCGCAA---GGTATC------------------------------------TTCTGGCGC---TTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAG---------ATT------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------AGTGCA------------------ACTTTAGGA---TTCATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGTAAAGTTGCTGCAGAT------GAG---GCCCCGGCTTCTGTT---CAA---TCA---GCT---TTC---TCA---ACAATG---CGTTGGATTGTGACGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSQ-GI------------FWR-LMIGTVVMLVGGYAGE---I------G--Y-----------I----------------------SA------TLG-FIIGMLGWAYILYEI-----F--A-GEASKVAAD--E-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-HTCC2255]_KJ927048 [III-Alpha3-HTCC2255] PRGD_OTU004b_d90bed10dda762be6c4356082bf207f6 gb|KJ927048| PRGD_OTU004b_d90bed10dda762be6c4356082bf207f6, putative proteorhodopsin gene, partial cds. PRGD_OTU004b_d90bed10dda762be6c4356082bf207f6, putative proteorhodopsin gene, partial cds. KJ927048 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/HTCC2255 Rhodobacterales-like]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 HTCC2255 Rhodobacterales-like proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) TTAATTACTGTTCCATTGTTGATGGTAGAGTTTTATTTAATTTTACGCGCAATTACCAACGTATCGCAAGGTATCTTCTGGCGCTTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAAATCGGTTATATTAGTGCAACTTTAGGATTTATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATCTTTGCAGGTGAAGCTAGTAAAGTTGCTGCAGATGAGGCTCCGGCTTCTGTTCAATCAGCTTTCTCAACAATGCGTTGGATTGTGACGATT LITVPLLMVEFYLILRAITNVSQGIFWRLMIGTVVMLVGGYAGEIGYISATLGFIIGMLGWAYILYEIFAGEASKVAADEAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTTCCATTGTTGATGGTAGAGTTTTATTTAATTTTACGCGCA---------ATT---ACCAACGTATCGCAA---GGTATC------------------------------------TTCTGGCGC---TTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAA---------ATC------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------AGTGCA------------------ACTTTAGGA---TTTATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGTAAAGTTGCTGCAGAT------GAG---GCTCCGGCTTCTGTT---CAA---TCA---GCT---TTC---TCA---ACAATG---CGTTGGATTGTGACGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSQ-GI------------FWR-LMIGTVVMLVGGYAGE---I------G--Y-----------I----------------------SA------TLG-FIIGMLGWAYILYEI-----F--A-GEASKVAAD--E-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-HTCC2255]_KJ927043 [III-Alpha3-HTCC2255] PRGD_OTU004b_498a2ff8ca3e4a99a6af31d0dd2236ff gb|KJ927043| PRGD_OTU004b_498a2ff8ca3e4a99a6af31d0dd2236ff, putative proteorhodopsin gene, partial cds. PRGD_OTU004b_498a2ff8ca3e4a99a6af31d0dd2236ff, putative proteorhodopsin gene, partial cds. KJ927043 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/HTCC2255 Rhodobacterales-like]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 HTCC2255 Rhodobacterales-like proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTTTACGCGCAATTACTAACGTATCGCAAGGTATCTTCTGGCGTTTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAGATCGGTTATATTAGTGCAACTTTAGGATTTATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATCTTTGCAGGTGAAGCTAGTAAAGTTGCTGCAGATGAGGCTCCGGCTTCTGTTCAATCGGCTTTCTCAACAATGCGTTGGATTGTGACGATT LITVPLLMVEFYLILRAITNVSQGIFWRLMIGTVVMLVGGYAGEIGYISATLGFIIGMLGWAYILYEIFAGEASKVAADEAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTTTACGCGCA---------ATT---ACTAACGTATCGCAA---GGTATC------------------------------------TTCTGGCGT---TTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAG---------ATC------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------AGTGCA------------------ACTTTAGGA---TTTATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGTAAAGTTGCTGCAGAT------GAG---GCTCCGGCTTCTGTT---CAA---TCG---GCT---TTC---TCA---ACAATG---CGTTGGATTGTGACGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSQ-GI------------FWR-LMIGTVVMLVGGYAGE---I------G--Y-----------I----------------------SA------TLG-FIIGMLGWAYILYEI-----F--A-GEASKVAAD--E-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-HTCC2255]_KJ927044 [III-Alpha3-HTCC2255] PRGD_OTU004b_69ad4ed46dd8ec0385df84f9c99846b6 gb|KJ927044| PRGD_OTU004b_69ad4ed46dd8ec0385df84f9c99846b6, putative proteorhodopsin gene, partial cds. PRGD_OTU004b_69ad4ed46dd8ec0385df84f9c99846b6, putative proteorhodopsin gene, partial cds. KJ927044 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/HTCC2255 Rhodobacterales-like]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 HTCC2255 Rhodobacterales-like proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) TTAATTACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTTTACGCGCAATTACTAACGTATCGCAAGGTATTTTCTGGCGTTTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAAATCGGTTATATTAGTGCAACTTTAGGATTTATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATCTTTGCAGGTGAAGCTAGTAAAGTTGCTGCAGATGAGGCTCCGGCTTCTGTTCAATCAGCTTTCTCAACAATGCGTTGGATTGTGACGATT LITVPLLMVEFYLILRAITNVSQGIFWRLMIGTVVMLVGGYAGEIGYISATLGFIIGMLGWAYILYEIFAGEASKVAADEAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTTCCATTATTGATGGTAGAGTTTTATTTAATTTTACGCGCA---------ATT---ACTAACGTATCGCAA---GGTATT------------------------------------TTCTGGCGT---TTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAA---------ATC------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------AGTGCA------------------ACTTTAGGA---TTTATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGTAAAGTTGCTGCAGAT------GAG---GCTCCGGCTTCTGTT---CAA---TCA---GCT---TTC---TCA---ACAATG---CGTTGGATTGTGACGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSQ-GI------------FWR-LMIGTVVMLVGGYAGE---I------G--Y-----------I----------------------SA------TLG-FIIGMLGWAYILYEI-----F--A-GEASKVAAD--E-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-HTCC2255]_KJ927040 [III-Alpha3-HTCC2255] PRGD_OTU004b_00696c8a08fc4f6c0310250af678d202 gb|KJ927040| PRGD_OTU004b_00696c8a08fc4f6c0310250af678d202, putative proteorhodopsin gene, partial cds. PRGD_OTU004b_00696c8a08fc4f6c0310250af678d202, putative proteorhodopsin gene, partial cds. KJ927040 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/HTCC2255 Rhodobacterales-like]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 HTCC2255 Rhodobacterales-like proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTGATTACTGTTCCGTTATTGATGGTAGAATTTTATTTAATTTTACGTGCAATTACTAACGTATCGCAAGGTATCTTCTGGCGCTTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAGATCGGTTATATTAGTGCAACTTTAGGATTTATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATCTTTGCAGGTGAAGCTAGTAAAGTTGCTGCAGATGAGGCCCCGGCTTCTGTTCAATCAGCTTTCTCAACAATGCGTTGGATTGTGACGATT LITVPLLMVEFYLILRAITNVSQGIFWRLMIGTVVMLVGGYAGEIGYISATLGFIIGMLGWAYILYEIFAGEASKVAADEAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTTCCGTTATTGATGGTAGAATTTTATTTAATTTTACGTGCA---------ATT---ACTAACGTATCGCAA---GGTATC------------------------------------TTCTGGCGC---TTAATGATTGGTACAGTGGTAATGCTCGTAGGTGGGTATGCTGGTGAG---------ATC------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------AGTGCA------------------ACTTTAGGA---TTTATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGTAAAGTTGCTGCAGAT------GAG---GCCCCGGCTTCTGTT---CAA---TCA---GCT---TTC---TCA---ACAATG---CGTTGGATTGTGACGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSQ-GI------------FWR-LMIGTVVMLVGGYAGE---I------G--Y-----------I----------------------SA------TLG-FIIGMLGWAYILYEI-----F--A-GEASKVAAD--E-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-HTCC2255]_KJ927042 [III-Alpha3-HTCC2255] PRGD_OTU004b_0e840a99d9f000ec0f332e073c86ca07 gb|KJ927042| PRGD_OTU004b_0e840a99d9f000ec0f332e073c86ca07, putative proteorhodopsin gene, partial cds. PRGD_OTU004b_0e840a99d9f000ec0f332e073c86ca07, putative proteorhodopsin gene, partial cds. KJ927042 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/HTCC2255 Rhodobacterales-like]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 HTCC2255 Rhodobacterales-like proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACTGTTCCATTGCTAATGGTAGAATTTTATTTAATTTTACGCGCAATTACTAACGTATCGCAAGGTATATTCTGGCGCTTAATGATTGGTACAGTGGTGATGCTCGTAGGTGGGTATGCTGGTGAAATCGGTTATATTAGTGCAACTTTAGGATTTATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATCTTTGCAGGTGAAGCTAGTAAAGTTGCTGCAGATGAGGCTCCGGCTTCTGTTCAATCAGCTTTCTCAACAATGCGTTGGATTGTGACGATT LITVPLLMVEFYLILRAITNVSQGIFWRLMIGTVVMLVGGYAGEIGYISATLGFIIGMLGWAYILYEIFAGEASKVAADEAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTTCCATTGCTAATGGTAGAATTTTATTTAATTTTACGCGCA---------ATT---ACTAACGTATCGCAA---GGTATA------------------------------------TTCTGGCGC---TTAATGATTGGTACAGTGGTGATGCTCGTAGGTGGGTATGCTGGTGAA---------ATC------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------AGTGCA------------------ACTTTAGGA---TTTATTATCGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGTAAAGTTGCTGCAGAT------GAG---GCTCCGGCTTCTGTT---CAA---TCA---GCT---TTC---TCA---ACAATG---CGTTGGATTGTGACGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TNVSQ-GI------------FWR-LMIGTVVMLVGGYAGE---I------G--Y-----------I----------------------SA------TLG-FIIGMLGWAYILYEI-----F--A-GEASKVAAD--E-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-HTCC2255]_KJ927045 [III-Alpha3-HTCC2255] PRGD_OTU004b_886db64b91593c571d77832a0336d39a gb|KJ927045| PRGD_OTU004b_886db64b91593c571d77832a0336d39a, putative proteorhodopsin gene, partial cds. PRGD_OTU004b_886db64b91593c571d77832a0336d39a, putative proteorhodopsin gene, partial cds. KJ927045 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/HTCC2255 Rhodobacterales-like]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 HTCC2255 Rhodobacterales-like proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833) CTAATTACTGTTCCATTATTAATGGTTGAGTTTTATTTGATCCTTCGTGCAATCACTAAGGTATCAATTGGCATCTTCTGGCGCCTAATGATTGGTACTGTAGTCATGCTCGTTGGCGGGTATGCTGGTGAAATTGGTTATATTAGTGCTACTTTAGGATTTATCATTGGTATGCTTGGTTGGGCATACATATTATATGAAATCTTTGCAGGTGAAGCTAGTAAAGTTGCTGCAGATGAAGCTCCTGCTTCAGTACAATCTGCATTCTCAACAATGCGTTGGATTGTGACGATT LITVPLLMVEFYLILRAITKVSIGIFWRLMIGTVVMLVGGYAGEIGYISATLGFIIGMLGWAYILYEIFAGEASKVAADEAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTTCCATTATTAATGGTTGAGTTTTATTTGATCCTTCGTGCA---------ATC---ACTAAGGTATCAATT---GGCATC------------------------------------TTCTGGCGC---CTAATGATTGGTACTGTAGTCATGCTCGTTGGCGGGTATGCTGGTGAA---------ATT------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------AGTGCT------------------ACTTTAGGA---TTTATCATTGGTATGCTTGGTTGGGCATACATATTATATGAAATC---------------TTT------GCA---GGTGAAGCTAGTAAAGTTGCTGCAGAT------GAA---GCTCCTGCTTCAGTA---CAA---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTGACGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TKVSI-GI------------FWR-LMIGTVVMLVGGYAGE---I------G--Y-----------I----------------------SA------TLG-FIIGMLGWAYILYEI-----F--A-GEASKVAAD--E-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-HTCC2255]_KJ927041 [III-Alpha3-HTCC2255] PRGD_OTU004b_04223ce063e0b17c6760408ee14d5f31 gb|KJ927041| PRGD_OTU004b_04223ce063e0b17c6760408ee14d5f31, putative proteorhodopsin gene, partial cds. PRGD_OTU004b_04223ce063e0b17c6760408ee14d5f31, putative proteorhodopsin gene, partial cds. KJ927041 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/HTCC2255 Rhodobacterales-like]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 HTCC2255 Rhodobacterales-like proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45; -33.28, 45.35) CTAATTACTGTTCCATTATTAATGGTTGAGTTTTATTTGATCCTTCGTGCAATCACTAAGGTATCAATTGGCATCTTCTGGCGCCTAATGATTGGTACTGTAGTCATGCTCGTTGGTGGGTATGCTGGTGAAATCGGTTATATTAGTGCTACTTTAGGATTTATTATTGGTATGCTTGGTTGGGCATACATATTATATGAAATCTTTGCAGGTGAAGCTAGTAAAGTTGCTGCAGATGAAGCTCCTGCTTCAGTACAATCTGCATTCTCAACAATGCGTTGGATTGTGACGATT LITVPLLMVEFYLILRAITKVSIGIFWRLMIGTVVMLVGGYAGEIGYISATLGFIIGMLGWAYILYEIFAGEASKVAADEAPASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTTCCATTATTAATGGTTGAGTTTTATTTGATCCTTCGTGCA---------ATC---ACTAAGGTATCAATT---GGCATC------------------------------------TTCTGGCGC---CTAATGATTGGTACTGTAGTCATGCTCGTTGGTGGGTATGCTGGTGAA---------ATC------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------AGTGCT------------------ACTTTAGGA---TTTATTATTGGTATGCTTGGTTGGGCATACATATTATATGAAATC---------------TTT------GCA---GGTGAAGCTAGTAAAGTTGCTGCAGAT------GAA---GCTCCTGCTTCAGTA---CAA---TCT---GCA---TTC---TCA---ACAATG---CGTTGGATTGTGACGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TKVSI-GI------------FWR-LMIGTVVMLVGGYAGE---I------G--Y-----------I----------------------SA------TLG-FIIGMLGWAYILYEI-----F--A-GEASKVAAD--E-APASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-HTCC2255]_KJ927047 [III-Alpha3-HTCC2255] PRGD_OTU004b_d4be6b00fac97504018bd6a151badbdb gb|KJ927047| PRGD_OTU004b_d4be6b00fac97504018bd6a151badbdb, putative proteorhodopsin gene, partial cds. PRGD_OTU004b_d4be6b00fac97504018bd6a151badbdb, putative proteorhodopsin gene, partial cds. KJ927047 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/HTCC2255 Rhodobacterales-like]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 HTCC2255 Rhodobacterales-like proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683) TTAATTACTGTACCATTATTAATGGTTGAGTTTTACCTAATCTTACGCGCAATAACTAAGGTATCAATTGGTATCTTCTGGCGTTTAATGATCGGTACAGTAGTAATGCTTGTAGGTGGTTATGCTGGTGAAATTGGTTACATTAGTGCAACTCTTGGATTCATTATTGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATCTTTGCAGGTGAAGCTAGTAAAGTTGCTGCAAATGAAGCTCCGGCTTCAGTACAATCTGCGTTCTCTACAATGCGTTGGGTCGTATCAATC LITVPLLMVEFYLILRAITKVSIGIFWRLMIGTVVMLVGGYAGEIGYISATLGFIIGMLGWAYILYEIFAGEASKVAANEAPASVQSAFSTMRWVVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCATTATTAATGGTTGAGTTTTACCTAATCTTACGCGCA---------ATA---ACTAAGGTATCAATT---GGTATC------------------------------------TTCTGGCGT---TTAATGATCGGTACAGTAGTAATGCTTGTAGGTGGTTATGCTGGTGAA---------ATT------------------GGT------TAC---------------------------------ATT------------------------------------------------------------------AGTGCA------------------ACTCTTGGA---TTCATTATTGGTATGCTTGGTTGGGCTTACATCTTGTATGAAATC---------------TTT------GCA---GGTGAAGCTAGTAAAGTTGCTGCAAAT------GAA---GCTCCGGCTTCAGTA---CAA---TCT---GCG---TTC---TCT---ACAATG---CGTTGGGTCGTATCAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TKVSI-GI------------FWR-LMIGTVVMLVGGYAGE---I------G--Y-----------I----------------------SA------TLG-FIIGMLGWAYILYEI-----F--A-GEASKVAAN--E-APASV-Q-S-A-F-S-TM-RWVVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha3-HTCC2255]_KJ927049 [III-Alpha3-HTCC2255] PRGD_OTU004b_e5faa9da29b003785a7303b3a1905b63 gb|KJ927049| PRGD_OTU004b_e5faa9da29b003785a7303b3a1905b63, putative proteorhodopsin gene, partial cds. PRGD_OTU004b_e5faa9da29b003785a7303b3a1905b63, putative proteorhodopsin gene, partial cds. KJ927049 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 3/HTCC2255 Rhodobacterales-like]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 3 HTCC2255 Rhodobacterales-like proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-33.28, 45.35) TTGATTACTGTTCCATTATTGATGGTTGAATTTTACCTTATCTTGCGTGCGATCACTAAAGTTTCAATCGGCATTTTCTGGCGTTTGATGATTGGTACACTTGTAATGCTTGTTGGCGGTTACGCTGGTGAAGTTGGTTACATTAATGCCACGCTTGGTTTCATCATTGGTATGCTCGGTTGGGCGTACATCTTATATGAAATCTTTGCTGGTGAAGCAAGTAAAGTTGCTGCAACAAAAGCTTCAGCTTCTGTACAATCTGCTTTCTCAACAATGCGTTGGATTGTAACAATT LITVPLLMVEFYLILRAITKVSIGIFWRLMIGTLVMLVGGYAGEVGYINATLGFIIGMLGWAYILYEIFAGEASKVAATKASASVQSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTTCCATTATTGATGGTTGAATTTTACCTTATCTTGCGTGCG---------ATC---ACTAAAGTTTCAATC---GGCATT------------------------------------TTCTGGCGT---TTGATGATTGGTACACTTGTAATGCTTGTTGGCGGTTACGCTGGTGAA---------GTT------------------GGT------TAC---------------------------------ATT------------------------------------------------------------------AATGCC------------------ACGCTTGGT---TTCATCATTGGTATGCTCGGTTGGGCGTACATCTTATATGAAATC---------------TTT------GCT---GGTGAAGCAAGTAAAGTTGCTGCAACA------AAA---GCTTCAGCTTCTGTA---CAA---TCT---GCT---TTC---TCA---ACAATG---CGTTGGATTGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-TKVSI-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------NA------TLG-FIIGMLGWAYILYEI-----F--A-GEASKVAAT--K-ASASV-Q-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_KJ929458 [III-Alpha2-SAR11/Himb59] PRGD_OTU129a_00e183e28860152318873de60f8dafbc gb|KJ929458| PRGD_OTU129a_00e183e28860152318873de60f8dafbc, putative proteorhodopsin gene, partial cds. PRGD_OTU129a_00e183e28860152318873de60f8dafbc, putative proteorhodopsin gene, partial cds. KJ929458 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACTGTGCCTCTATTGATGGTTGAATTCTACATCATCCTAAGAGCTGTTGGAAATGCTTCTGGCGGTATCTTCTGGAGACTAATGATCGGTACTTTGGTCATGTTAGTTGCTGGATACATGGGTGAAGCTGGTTACATCAATGCTTGGGCAGGCTTCATCGTTGGTATGGCTGGTTGGGCATACATCTTGTATGAAGTATTCGCTGGTGAGGCTGGAAAAATGGCTGCTGATAAGGCACCTGCTTCAGTTCAACAAGCATTCTCAACAATGAGATGGATCGTAACAATT LITVPLLMVEFYIILRAVGNASGGIFWRLMIGTLVMLVAGYMGEAGYINAWAGFIVGMAGWAYILYEVFAGEAGKMAADKAPASVQQAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCTCTATTGATGGTTGAATTCTACATCATCCTAAGAGCT---------GTT---GGAAATGCTTCTGGC---GGTATC------------------------------------TTCTGGAGA---CTAATGATCGGTACTTTGGTCATGTTAGTTGCTGGATACATGGGTGAA---------GCT------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCT------------------TGGGCAGGC---TTCATCGTTGGTATGGCTGGTTGGGCATACATCTTGTATGAAGTA---------------TTC------GCT---GGTGAGGCTGGAAAAATGGCTGCTGAT------AAG---GCACCTGCTTCAGTT---CAA---CAA---GCA---TTC---TCA---ACAATG---AGATGGATCGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYIILRA---V-GNASG-GI------------FWR-LMIGTLVMLVAGYMGE---A------G--Y-----------I----------------------NA------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKMAAD--K-APASV-Q-Q-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha2-SAR11/Himb59]_KJ929457 [III-Alpha2-SAR11/Himb59] PRGD_OTU129a_otuREP_f87524ffb5774ccbc2f390805883aa52 gb|KJ929457| PRGD_OTU129a_otuREP_f87524ffb5774ccbc2f390805883aa52, putative proteorhodopsin gene, partial cds. PRGD_OTU129a_otuREP_f87524ffb5774ccbc2f390805883aa52, putative proteorhodopsin gene, partial cds. KJ929457 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/SAR11 Himb59 subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 SAR11 Himb59 subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATTACTGTGCCTCTATTGATGGTTGAATTCTACATCATCCTAAGAGCTGTTGGAAATGCTTCCGGCGGTATCTTCTGGAGACTAATGATCGGTTCTTTGGTCATGTTAGTTGCTGGATACATGGGTGAAGCTGGTTACATCAATGCATGGGCAGGTTTCATCGTTGGTATGGCTGGTTGGGCATATATTTTGTATGAAGTATTTGCTGGTGAAGCTGGAAAATTGGCTGCTGATAAGGCGCCTGCTTCAGTTCAACAAGCATTCTCAACTATGAGATGGATTGTAACAATT LITVPLLMVEFYIILRAVGNASGGIFWRLMIGSLVMLVAGYMGEAGYINAWAGFIVGMAGWAYILYEVFAGEAGKLAADKAPASVQQAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCTCTATTGATGGTTGAATTCTACATCATCCTAAGAGCT---------GTT---GGAAATGCTTCCGGC---GGTATC------------------------------------TTCTGGAGA---CTAATGATCGGTTCTTTGGTCATGTTAGTTGCTGGATACATGGGTGAA---------GCT------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGCAGGT---TTCATCGTTGGTATGGCTGGTTGGGCATATATTTTGTATGAAGTA---------------TTT------GCT---GGTGAAGCTGGAAAATTGGCTGCTGAT------AAG---GCGCCTGCTTCAGTT---CAA---CAA---GCA---TTC---TCA---ACTATG---AGATGGATTGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYIILRA---V-GNASG-GI------------FWR-LMIGSLVMLVAGYMGE---A------G--Y-----------I----------------------NA------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKLAAD--K-APASV-Q-Q-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha2-a]_KJ929460 [III-Alpha2-a] PRGD_OTU129b_37e41b4235ba28395453441a769c3dbb gb|KJ929460| PRGD_OTU129b_37e41b4235ba28395453441a769c3dbb, putative proteorhodopsin gene, partial cds. PRGD_OTU129b_37e41b4235ba28395453441a769c3dbb, putative proteorhodopsin gene, partial cds. KJ929460 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833) TTAATTACAGTTCCTCTTTTAATGGTTGAATTCTACATTATCCTAAGAGCTATCGGAGCAGTTTCTGCAGGTATCTTCTGGAGATTAATGATTGGTTCAATGGTTATGTTAATCGCAGGCTATATGGGTGAAGCTGGTTACATCAATGCATGGGCTGGATTTATCGTAGGTATGGCTGGTTGGGCTTACATCTTGTATGAAGTTTTTGCTGGTGAAGCTGGTAAACTTGCTGCAGATAAAGCTCCTGCATCAGTTCAATCTGCTTTTAGCACAATGAGATGGATCGTTTCAATT LITVPLLMVEFYIILRAIGAVSAGIFWRLMIGSMVMLIAGYMGEAGYINAWAGFIVGMAGWAYILYEVFAGEAGKLAADKAPASVQSAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCTCTTTTAATGGTTGAATTCTACATTATCCTAAGAGCT---------ATC---GGAGCAGTTTCTGCA---GGTATC------------------------------------TTCTGGAGA---TTAATGATTGGTTCAATGGTTATGTTAATCGCAGGCTATATGGGTGAA---------GCT------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGCTGGA---TTTATCGTAGGTATGGCTGGTTGGGCTTACATCTTGTATGAAGTT---------------TTT------GCT---GGTGAAGCTGGTAAACTTGCTGCAGAT------AAA---GCTCCTGCATCAGTT---CAA---TCT---GCT---TTT---AGC---ACAATG---AGATGGATCGTTTCAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYIILRA---I-GAVSA-GI------------FWR-LMIGSMVMLIAGYMGE---A------G--Y-----------I----------------------NA------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKLAAD--K-APASV-Q-S-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha2-a]_KJ929461 [III-Alpha2-a] PRGD_OTU129b_b040548898f56bfda6d74cea18940709 gb|KJ929461| PRGD_OTU129b_b040548898f56bfda6d74cea18940709, putative proteorhodopsin gene, partial cds. PRGD_OTU129b_b040548898f56bfda6d74cea18940709, putative proteorhodopsin gene, partial cds. KJ929461 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (69.5142, -133.4185) TTAATTACCGTTCCACTTCTTATGGTTGAATTTTACATTATCCTTAGAGCTGTCGGCGCTGTTTCAATTGGTATCTTCTGGAGATTAATGATTGGTACATTAGTAATGCTAGTTGCTGGTTATCTTGGCGAAGTCGGTGCTATCAATGCATGGGCTGGATTTATCGTTGGTATGGCTGGTTGGGCTTACATCTTGTATGAAGTTTTTGCTGGTGAAGCTGGTAAACTTGCTGCAGATAAAGCTCCTGCATCAGTACAATCTGCTTTCTCATCAATGAGATGGATTGTATCAATT LITVPLLMVEFYIILRAVGAVSIGIFWRLMIGTLVMLVAGYLGEVGAINAWAGFIVGMAGWAYILYEVFAGEAGKLAADKAPASVQSAFSSMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACCGTTCCACTTCTTATGGTTGAATTTTACATTATCCTTAGAGCT---------GTC---GGCGCTGTTTCAATT---GGTATC------------------------------------TTCTGGAGA---TTAATGATTGGTACATTAGTAATGCTAGTTGCTGGTTATCTTGGCGAA---------GTC------------------GGT------GCT---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGCTGGA---TTTATCGTTGGTATGGCTGGTTGGGCTTACATCTTGTATGAAGTT---------------TTT------GCT---GGTGAAGCTGGTAAACTTGCTGCAGAT------AAA---GCTCCTGCATCAGTA---CAA---TCT---GCT---TTC---TCA---TCAATG---AGATGGATTGTATCAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYIILRA---V-GAVSI-GI------------FWR-LMIGTLVMLVAGYLGE---V------G--A-----------I----------------------NA------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKLAAD--K-APASV-Q-S-A-F-S-SM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha2-a]_KJ929459 [III-Alpha2-a] PRGD_OTU129b_otuREP_e396c0444b19903fb68d7ae34a0ca72d gb|KJ929459| PRGD_OTU129b_otuREP_e396c0444b19903fb68d7ae34a0ca72d, putative proteorhodopsin gene, partial cds. PRGD_OTU129b_otuREP_e396c0444b19903fb68d7ae34a0ca72d, putative proteorhodopsin gene, partial cds. KJ929459 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 2/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), Indian Ocean (-14.48, 113.45) TTAATTACTGTTCCACTTCTTATGGTTGAATTTTACATTATTCTTAGAGCTGTCGGCGCTGTTTCAGTTGGTATCTTCTGGAGATTAATGATTGGTACAGTAGTAATGCTAGTTGCTGGTTATCTTGGCGAAGTCGGTGCTATCAATGCATGGGCTGGATTTATTGTTGGTATGGCTGGTTGGGCTTACATCTTGTATGAAGTTTTTGCTGGTGAAGCTGGTAAACTTGCTGCAGAAAAAGCTCCTGCATCAGTACAATCTGCTTTCTCATCAATGAGATGGATTGTATCAATT LITVPLLMVEFYIILRAVGAVSVGIFWRLMIGTVVMLVAGYLGEVGAINAWAGFIVGMAGWAYILYEVFAGEAGKLAAEKAPASVQSAFSSMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTTCCACTTCTTATGGTTGAATTTTACATTATTCTTAGAGCT---------GTC---GGCGCTGTTTCAGTT---GGTATC------------------------------------TTCTGGAGA---TTAATGATTGGTACAGTAGTAATGCTAGTTGCTGGTTATCTTGGCGAA---------GTC------------------GGT------GCT---------------------------------ATC------------------------------------------------------------------AATGCA------------------TGGGCTGGA---TTTATTGTTGGTATGGCTGGTTGGGCTTACATCTTGTATGAAGTT---------------TTT------GCT---GGTGAAGCTGGTAAACTTGCTGCAGAA------AAA---GCTCCTGCATCAGTA---CAA---TCT---GCT---TTC---TCA---TCAATG---AGATGGATTGTATCAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYIILRA---V-GAVSV-GI------------FWR-LMIGTVVMLVAGYLGE---V------G--A-----------I----------------------NA------WAG-FIVGMAGWAYILYEV-----F--A-GEAGKLAAE--K-APASV-Q-S-A-F-S-SM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928056 [III-Gamma4-OM60] PRGD_OTU023_6e07a8f24e869d2b753a0fce9c0abeda gb|KJ928056| PRGD_OTU023_6e07a8f24e869d2b753a0fce9c0abeda, putative proteorhodopsin gene, partial cds. PRGD_OTU023_6e07a8f24e869d2b753a0fce9c0abeda, putative proteorhodopsin gene, partial cds. KJ928056 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTTTTGACAGTTCCACTGCAACTCGTCGAGTTCTATCTAATACTTGCGGCAGTTGCTGCGGTGTCCGGCGGCATTTTCTGGAGGATCTTTATCGGATCTTTGGTAATGTTGGTGCCCGGTTACATGGGTGAGGCTGGATATTTGAATTCCACTGTAGGCTTTGTAATCGGAATGCTCGGATGGGCTTTCATCCTTTACGAAATCCATGCTGGCGAAGCGAGCAAAGTCAGCGCCGCATCAGCTTCCGCGGCCACACAAAGCTCGTTCACTATGATGAAGTGGGTTGTTACGGTC LLTVPLQLVEFYLILAAVAAVSGGIFWRIFIGSLVMLVPGYMGEAGYLNSTVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTGACAGTTCCACTGCAACTCGTCGAGTTCTATCTAATACTTGCGGCA---------GTT---GCTGCGGTGTCCGGC---GGCATT------------------------------------TTCTGGAGG---ATCTTTATCGGATCTTTGGTAATGTTGGTGCCCGGTTACATGGGTGAG---------GCT------------------GGA------TAT---------------------------------TTG------------------------------------------------------------------AATTCC------------------ACTGTAGGC---TTTGTAATCGGAATGCTCGGATGGGCTTTCATCCTTTACGAAATC---------------CAT------GCT---GGCGAAGCGAGCAAAGTCAGCGCCGCA------TCA---GCTTCCGCGGCCACA---CAA---AGC---TCG---TTC---ACT---ATGATG---AAGTGGGTTGTTACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFIGSLVMLVPGYMGE---A------G--Y-----------L----------------------NS------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928078 [III-Gamma4-OM60] PRGD_OTU023_e4a946995dcac4c9eae3c8495a2ad0cd gb|KJ928078| PRGD_OTU023_e4a946995dcac4c9eae3c8495a2ad0cd, putative proteorhodopsin gene, partial cds. PRGD_OTU023_e4a946995dcac4c9eae3c8495a2ad0cd, putative proteorhodopsin gene, partial cds. KJ928078 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTTTTGACAGTTCCACTGCAACTCGTCGAGTTCTATCTAATACTTGCGGCAGTTGCTGCGGTGTCCGGCGGCATTTTCTGGAGGATCTTTATCGGATCTTTGGTAATGTTGGTGCCAGGTTACATGGGTGAGGCTGGATACTTGAATTCCACTGTAGGATTTGTCATCGGAATGCTCGGATGGGCTTTCATCCTTTACGAAATCCATGCTGGCGAAGCGAGCAAAGTCAGCGCCGCATCAGCTTCCGCGGCCACACAAAGCTCATTCACTATGATGAAGTGGGTTGTTACGGTC LLTVPLQLVEFYLILAAVAAVSGGIFWRIFIGSLVMLVPGYMGEAGYLNSTVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTGACAGTTCCACTGCAACTCGTCGAGTTCTATCTAATACTTGCGGCA---------GTT---GCTGCGGTGTCCGGC---GGCATT------------------------------------TTCTGGAGG---ATCTTTATCGGATCTTTGGTAATGTTGGTGCCAGGTTACATGGGTGAG---------GCT------------------GGA------TAC---------------------------------TTG------------------------------------------------------------------AATTCC------------------ACTGTAGGA---TTTGTCATCGGAATGCTCGGATGGGCTTTCATCCTTTACGAAATC---------------CAT------GCT---GGCGAAGCGAGCAAAGTCAGCGCCGCA------TCA---GCTTCCGCGGCCACA---CAA---AGC---TCA---TTC---ACT---ATGATG---AAGTGGGTTGTTACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFIGSLVMLVPGYMGE---A------G--Y-----------L----------------------NS------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928044 [III-Gamma4-OM60] PRGD_OTU023_otuREP_8cb6f1dfdc8b0ee5a3082b4caec18d03 gb|KJ928044| PRGD_OTU023_otuREP_8cb6f1dfdc8b0ee5a3082b4caec18d03, putative proteorhodopsin gene, partial cds. PRGD_OTU023_otuREP_8cb6f1dfdc8b0ee5a3082b4caec18d03, putative proteorhodopsin gene, partial cds. KJ928044 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937), Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTTTTGACAGTTCCACTGCAACTCGTCGAGTTCTATCTAATACTTGCGGCAGTTGCTGCGGTGTCCGGCGGCATTTTCTGGAGGATCTTTATCGGATCTTTGGTAATGCTGGTGCCCGGTTACATGGGTGAGGCTGGATACTTAAATTCCACTGTAGGATTTGTAATCGGAATGCTCGGATGGGCTTTCATCCTTTACGAAATCCATGCTGGCGAAGCGAGCAAAGTCAGCGCCGCATCAGCTTCCGCGGCCACACAAAGCTCGTTCACTATGATGAAGTGGGTTGTTACGGTC LLTVPLQLVEFYLILAAVAAVSGGIFWRIFIGSLVMLVPGYMGEAGYLNSTVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTGACAGTTCCACTGCAACTCGTCGAGTTCTATCTAATACTTGCGGCA---------GTT---GCTGCGGTGTCCGGC---GGCATT------------------------------------TTCTGGAGG---ATCTTTATCGGATCTTTGGTAATGCTGGTGCCCGGTTACATGGGTGAG---------GCT------------------GGA------TAC---------------------------------TTA------------------------------------------------------------------AATTCC------------------ACTGTAGGA---TTTGTAATCGGAATGCTCGGATGGGCTTTCATCCTTTACGAAATC---------------CAT------GCT---GGCGAAGCGAGCAAAGTCAGCGCCGCA------TCA---GCTTCCGCGGCCACA---CAA---AGC---TCG---TTC---ACT---ATGATG---AAGTGGGTTGTTACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFIGSLVMLVPGYMGE---A------G--Y-----------L----------------------NS------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928067 [III-Gamma4-OM60] PRGD_OTU023_9db37a865b45233e66e72667899bce43 gb|KJ928067| PRGD_OTU023_9db37a865b45233e66e72667899bce43, putative proteorhodopsin gene, partial cds. PRGD_OTU023_9db37a865b45233e66e72667899bce43, putative proteorhodopsin gene, partial cds. KJ928067 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTTTTGACAGTTCCACTGCAACTCGTCGAGTTCTATCTAATACTTGCGGCAGTTGCTGCGGTGTCCGGCGGCATTTTCTGGAGGATCTTTATCGGATCTTTGGTAATGTTGGTGCCCGGTTACATGGGTGAGGCTGGATACTTAAATTCCACTGTAGGATTCGTAATCGGAATGCTCGGATGGGCTTTCATTCTCTACGAAATCCATGCTGGCGAAGCGAGCAAAGTCAGCGCCGCATCAGCTTCCGCGGCCACACAAAGCTCGTTCACTATGATGAAGTGGGTTGTTACGGTC LLTVPLQLVEFYLILAAVAAVSGGIFWRIFIGSLVMLVPGYMGEAGYLNSTVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTGACAGTTCCACTGCAACTCGTCGAGTTCTATCTAATACTTGCGGCA---------GTT---GCTGCGGTGTCCGGC---GGCATT------------------------------------TTCTGGAGG---ATCTTTATCGGATCTTTGGTAATGTTGGTGCCCGGTTACATGGGTGAG---------GCT------------------GGA------TAC---------------------------------TTA------------------------------------------------------------------AATTCC------------------ACTGTAGGA---TTCGTAATCGGAATGCTCGGATGGGCTTTCATTCTCTACGAAATC---------------CAT------GCT---GGCGAAGCGAGCAAAGTCAGCGCCGCA------TCA---GCTTCCGCGGCCACA---CAA---AGC---TCG---TTC---ACT---ATGATG---AAGTGGGTTGTTACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFIGSLVMLVPGYMGE---A------G--Y-----------L----------------------NS------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928074 [III-Gamma4-OM60] PRGD_OTU023_c13f2afde72461cef5d1324858b10444 gb|KJ928074| PRGD_OTU023_c13f2afde72461cef5d1324858b10444, putative proteorhodopsin gene, partial cds. PRGD_OTU023_c13f2afde72461cef5d1324858b10444, putative proteorhodopsin gene, partial cds. KJ928074 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTTTGACAGTTCCACTGCAACTCGTCGAGTTCTATCTAATACTTGCGGCAGTTGCTGCGGTGTCCGGCGGCATTTTCTGGAGGATCTTTATCGGATCTTTGGTAATGTTGGTGCCCGGTTACATGGGTGAGGCTGGATACTTAAATTCCACTGTAGGTTTTGTAATCGGAATGCTCGGATGGGCGTTCATCCTTTACGAAATCCATGCTGGCGAAGCGAGCAAAGTCAGCGCCGCATCGGCTTCAGCGGCCACGCAGAGCTCGTTTACCATGATGAAGTGGGTTGTTACGGTC LLTVPLQLVEFYLILAAVAAVSGGIFWRIFIGSLVMLVPGYMGEAGYLNSTVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTGACAGTTCCACTGCAACTCGTCGAGTTCTATCTAATACTTGCGGCA---------GTT---GCTGCGGTGTCCGGC---GGCATT------------------------------------TTCTGGAGG---ATCTTTATCGGATCTTTGGTAATGTTGGTGCCCGGTTACATGGGTGAG---------GCT------------------GGA------TAC---------------------------------TTA------------------------------------------------------------------AATTCC------------------ACTGTAGGT---TTTGTAATCGGAATGCTCGGATGGGCGTTCATCCTTTACGAAATC---------------CAT------GCT---GGCGAAGCGAGCAAAGTCAGCGCCGCA------TCG---GCTTCAGCGGCCACG---CAG---AGC---TCG---TTT---ACC---ATGATG---AAGTGGGTTGTTACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFIGSLVMLVPGYMGE---A------G--Y-----------L----------------------NS------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928066 [III-Gamma4-OM60] PRGD_OTU023_9c5a5392c7fb4039d1cf88c6b2c4c06f gb|KJ928066| PRGD_OTU023_9c5a5392c7fb4039d1cf88c6b2c4c06f, putative proteorhodopsin gene, partial cds. PRGD_OTU023_9c5a5392c7fb4039d1cf88c6b2c4c06f, putative proteorhodopsin gene, partial cds. KJ928066 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTTCTGACAGTTCCTCTACAACTTGTCGAGTTCTACTTAATACTTGCGGCAGTTGCTGCGGTGTCCGGCGGCATTTTCTGGAGGATCTTTATCGGATCTTTGGTTATGTTGGTGCCCGGCTATATGGGTGAGGCTGGATACTTAAATTCCACTGTAGGTTTTGTAATCGGAATGCTCGGATGGGCCTTCATCCTTTACGAAATCCATGCTGGCGAAGCGAGCAAAGTCAGCGCCGCATCAGCTTCCGCGGCCACGCAGAGCTCGTTTACCATGATGAAGTGGGTTGTTACGGTC LLTVPLQLVEFYLILAAVAAVSGGIFWRIFIGSLVMLVPGYMGEAGYLNSTVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTGACAGTTCCTCTACAACTTGTCGAGTTCTACTTAATACTTGCGGCA---------GTT---GCTGCGGTGTCCGGC---GGCATT------------------------------------TTCTGGAGG---ATCTTTATCGGATCTTTGGTTATGTTGGTGCCCGGCTATATGGGTGAG---------GCT------------------GGA------TAC---------------------------------TTA------------------------------------------------------------------AATTCC------------------ACTGTAGGT---TTTGTAATCGGAATGCTCGGATGGGCCTTCATCCTTTACGAAATC---------------CAT------GCT---GGCGAAGCGAGCAAAGTCAGCGCCGCA------TCA---GCTTCCGCGGCCACG---CAG---AGC---TCG---TTT---ACC---ATGATG---AAGTGGGTTGTTACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFIGSLVMLVPGYMGE---A------G--Y-----------L----------------------NS------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928075 [III-Gamma4-OM60] PRGD_OTU023_c663b991f25d377ee188c167e0f83ba8 gb|KJ928075| PRGD_OTU023_c663b991f25d377ee188c167e0f83ba8, putative proteorhodopsin gene, partial cds. PRGD_OTU023_c663b991f25d377ee188c167e0f83ba8, putative proteorhodopsin gene, partial cds. KJ928075 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTCTGACAGTTCCTCTACAGCTTGTCGAGTTCTACTTAATACTTGCGGCAGTTGCTGCGGTGTCCGGCGGCATTTTCTGGAGGATCTTTATCGGATCTTTGGTTATGTTGGTGCCCGGCTACATGGGTGAGGCTGGATACTTAAATTCCACTGTAGGTTTTGTAATCGGAATGCTCGGATGGGCGTTCATCCTTTACGAAATCCATGCTGGCGAAGCGAGCAAAGTCAGCGCCGCATCAGCTTCCGCGGCCACGCAGAGCTCGTTTACCATGATGAAGTGGGTTGTTACGGTC LLTVPLQLVEFYLILAAVAAVSGGIFWRIFIGSLVMLVPGYMGEAGYLNSTVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTGACAGTTCCTCTACAGCTTGTCGAGTTCTACTTAATACTTGCGGCA---------GTT---GCTGCGGTGTCCGGC---GGCATT------------------------------------TTCTGGAGG---ATCTTTATCGGATCTTTGGTTATGTTGGTGCCCGGCTACATGGGTGAG---------GCT------------------GGA------TAC---------------------------------TTA------------------------------------------------------------------AATTCC------------------ACTGTAGGT---TTTGTAATCGGAATGCTCGGATGGGCGTTCATCCTTTACGAAATC---------------CAT------GCT---GGCGAAGCGAGCAAAGTCAGCGCCGCA------TCA---GCTTCCGCGGCCACG---CAG---AGC---TCG---TTT---ACC---ATGATG---AAGTGGGTTGTTACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFIGSLVMLVPGYMGE---A------G--Y-----------L----------------------NS------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928062 [III-Gamma4-OM60] PRGD_OTU023_8ea04408218970266fc097b6c15ef804 gb|KJ928062| PRGD_OTU023_8ea04408218970266fc097b6c15ef804, putative proteorhodopsin gene, partial cds. PRGD_OTU023_8ea04408218970266fc097b6c15ef804, putative proteorhodopsin gene, partial cds. KJ928062 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTCTGACAGTTCCCCTACAACTTGTCGAGTTCTACTTAATACTTGCGGCAGTTGCTGCGGTGTCCGGCGGCATTTTCTGGAGGATCTTTATCGGGTCTTTGGTTATGTTGGTGCCCGGCTATATGGGTGAGGCTGGATACTTAAATTCCACTGTAGGTTTTGTAATCGGAATGCTCGGATGGGCGTTCATCCTTTATGAAATCCATGCTGGCGAAGCGAGCAAAGTCAGCGCCGCATCAGCTTCCGCGGCCACGCAGAGCTCGTTTACCATGATGAAGTGGGTTGTTACGGTC LLTVPLQLVEFYLILAAVAAVSGGIFWRIFIGSLVMLVPGYMGEAGYLNSTVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTGACAGTTCCCCTACAACTTGTCGAGTTCTACTTAATACTTGCGGCA---------GTT---GCTGCGGTGTCCGGC---GGCATT------------------------------------TTCTGGAGG---ATCTTTATCGGGTCTTTGGTTATGTTGGTGCCCGGCTATATGGGTGAG---------GCT------------------GGA------TAC---------------------------------TTA------------------------------------------------------------------AATTCC------------------ACTGTAGGT---TTTGTAATCGGAATGCTCGGATGGGCGTTCATCCTTTATGAAATC---------------CAT------GCT---GGCGAAGCGAGCAAAGTCAGCGCCGCA------TCA---GCTTCCGCGGCCACG---CAG---AGC---TCG---TTT---ACC---ATGATG---AAGTGGGTTGTTACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFIGSLVMLVPGYMGE---A------G--Y-----------L----------------------NS------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928059 [III-Gamma4-OM60] PRGD_OTU023_74252bd47a016c9edf856f510967e250 gb|KJ928059| PRGD_OTU023_74252bd47a016c9edf856f510967e250, putative proteorhodopsin gene, partial cds. PRGD_OTU023_74252bd47a016c9edf856f510967e250, putative proteorhodopsin gene, partial cds. KJ928059 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTTCTGACAGTTCCCCTACAACTTGTCGAGTTCTACTTAATACTTGCGGCAGTTGCTGCGGTGTCCGGCGGCATTTTCTGGAGGATCTTTATCGGATCTTTGGTTATGTTGGTGCCCGGCTATATGGGTGAGGCTGGATACTTAAATTCCACTGTAGGATTCGTAATCGGAATGCTCGGATGGGCTTTCATCCTTTACGAAATCCATGCTGGCGAAGCGAGCAAAGTCAGCGCCGCATCAGCTTCCGCGGCCACACAAAGCTCGTTCACTATGATGAAGTGGGTTGTTACGGTC LLTVPLQLVEFYLILAAVAAVSGGIFWRIFIGSLVMLVPGYMGEAGYLNSTVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTGACAGTTCCCCTACAACTTGTCGAGTTCTACTTAATACTTGCGGCA---------GTT---GCTGCGGTGTCCGGC---GGCATT------------------------------------TTCTGGAGG---ATCTTTATCGGATCTTTGGTTATGTTGGTGCCCGGCTATATGGGTGAG---------GCT------------------GGA------TAC---------------------------------TTA------------------------------------------------------------------AATTCC------------------ACTGTAGGA---TTCGTAATCGGAATGCTCGGATGGGCTTTCATCCTTTACGAAATC---------------CAT------GCT---GGCGAAGCGAGCAAAGTCAGCGCCGCA------TCA---GCTTCCGCGGCCACA---CAA---AGC---TCG---TTC---ACT---ATGATG---AAGTGGGTTGTTACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFIGSLVMLVPGYMGE---A------G--Y-----------L----------------------NS------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928072 [III-Gamma4-OM60] PRGD_OTU023_bd17e2a457d534a57e5f27545443d422 gb|KJ928072| PRGD_OTU023_bd17e2a457d534a57e5f27545443d422, putative proteorhodopsin gene, partial cds. PRGD_OTU023_bd17e2a457d534a57e5f27545443d422, putative proteorhodopsin gene, partial cds. KJ928072 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTCTGACAGTTCCACTGCAACTCGTCGAGTTCTATCTAATACTTGCGGCAGTTGCTGCGGTGTCCGGCGGCATTTTCTGGAGGATCTTTATCGGATCTTTGGTAATGTTGGTGCCCGGCTATATGGGTGAGGCTGGATACTTAAATTCCACTGTAGGCTTTGTAATCGGAATGCTCGGATGGGCTTTCATCCTTTACGAAATCCACGCTGGCGAAGCGAGCAAAGTCAGCGCCGCATCAGCTTCCGCGGCCACACAAAGCTCGTTCACTATGATGAAGTGGGTTGTTACGGTC LLTVPLQLVEFYLILAAVAAVSGGIFWRIFIGSLVMLVPGYMGEAGYLNSTVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTGACAGTTCCACTGCAACTCGTCGAGTTCTATCTAATACTTGCGGCA---------GTT---GCTGCGGTGTCCGGC---GGCATT------------------------------------TTCTGGAGG---ATCTTTATCGGATCTTTGGTAATGTTGGTGCCCGGCTATATGGGTGAG---------GCT------------------GGA------TAC---------------------------------TTA------------------------------------------------------------------AATTCC------------------ACTGTAGGC---TTTGTAATCGGAATGCTCGGATGGGCTTTCATCCTTTACGAAATC---------------CAC------GCT---GGCGAAGCGAGCAAAGTCAGCGCCGCA------TCA---GCTTCCGCGGCCACA---CAA---AGC---TCG---TTC---ACT---ATGATG---AAGTGGGTTGTTACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFIGSLVMLVPGYMGE---A------G--Y-----------L----------------------NS------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928077 [III-Gamma4-OM60] PRGD_OTU023_ddcb70244f8287a4ea31c1269061dd51 gb|KJ928077| PRGD_OTU023_ddcb70244f8287a4ea31c1269061dd51, putative proteorhodopsin gene, partial cds. PRGD_OTU023_ddcb70244f8287a4ea31c1269061dd51, putative proteorhodopsin gene, partial cds. KJ928077 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTCTGACGGTTCCTCTGCAATTAGTCGAGTTTTATCTAATACTCGCGGCAGTTGCTGCGGTGTCCGGCGGCATTTTCTGGAGGATATTTGTCGGCTCTTTGGTAATGTTAATTCCCGGTTATATGGGTGAGGCTGGTTACTTAAATTCCACTGTAGGATTTGTAATCGGAATGCTTGGGTGGGGGTTCATCCTTTACGAAATCCACGCAGGCGAAGCGAGCAAAGTCAGCGCCGCGTCAGCTTCCGCGGCAACACAAAGCTCGTTCACTATGATGAAGTGGGTTGTTACGGTC LLTVPLQLVEFYLILAAVAAVSGGIFWRIFVGSLVMLIPGYMGEAGYLNSTVGFVIGMLGWGFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTGACGGTTCCTCTGCAATTAGTCGAGTTTTATCTAATACTCGCGGCA---------GTT---GCTGCGGTGTCCGGC---GGCATT------------------------------------TTCTGGAGG---ATATTTGTCGGCTCTTTGGTAATGTTAATTCCCGGTTATATGGGTGAG---------GCT------------------GGT------TAC---------------------------------TTA------------------------------------------------------------------AATTCC------------------ACTGTAGGA---TTTGTAATCGGAATGCTTGGGTGGGGGTTCATCCTTTACGAAATC---------------CAC------GCA---GGCGAAGCGAGCAAAGTCAGCGCCGCG------TCA---GCTTCCGCGGCAACA---CAA---AGC---TCG---TTC---ACT---ATGATG---AAGTGGGTTGTTACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFVGSLVMLIPGYMGE---A------G--Y-----------L----------------------NS------TVG-FVIGMLGWGFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928045 [III-Gamma4-OM60] PRGD_OTU023_14e3fc3312532754c820dfab369ee50d gb|KJ928045| PRGD_OTU023_14e3fc3312532754c820dfab369ee50d, putative proteorhodopsin gene, partial cds. PRGD_OTU023_14e3fc3312532754c820dfab369ee50d, putative proteorhodopsin gene, partial cds. KJ928045 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTTCTGACAGTTCCTCTGCAACTAGTCGAGTTCTACTTAATACTTGCGGCAGTCGCTGCGGTGTCCGGCGGGATTTTCTGGAGGATCTTCATCGGGTCTTTAGTAATGTTGGTGCCCGGCTACATGGGTGAGGCTGGATATTTGAATTCCACTGTAGGTTTTGTAATCGGAATGCTCGGATGGGCGTTCATCCTTTACGAGATCCATGCTGGCGAAGCGAGCAAAGTCAGCGCCGCATCAGCTTCCGCGGCCACACAGAGCTCGTTTACTATGATGAAGTGGGTTGTTACGGTC LLTVPLQLVEFYLILAAVAAVSGGIFWRIFIGSLVMLVPGYMGEAGYLNSTVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTGACAGTTCCTCTGCAACTAGTCGAGTTCTACTTAATACTTGCGGCA---------GTC---GCTGCGGTGTCCGGC---GGGATT------------------------------------TTCTGGAGG---ATCTTCATCGGGTCTTTAGTAATGTTGGTGCCCGGCTACATGGGTGAG---------GCT------------------GGA------TAT---------------------------------TTG------------------------------------------------------------------AATTCC------------------ACTGTAGGT---TTTGTAATCGGAATGCTCGGATGGGCGTTCATCCTTTACGAGATC---------------CAT------GCT---GGCGAAGCGAGCAAAGTCAGCGCCGCA------TCA---GCTTCCGCGGCCACA---CAG---AGC---TCG---TTT---ACT---ATGATG---AAGTGGGTTGTTACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFIGSLVMLVPGYMGE---A------G--Y-----------L----------------------NS------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928054 [III-Gamma4-OM60] PRGD_OTU023_683889be49161c92ee0a92a2a0c7d8fd gb|KJ928054| PRGD_OTU023_683889be49161c92ee0a92a2a0c7d8fd, putative proteorhodopsin gene, partial cds. PRGD_OTU023_683889be49161c92ee0a92a2a0c7d8fd, putative proteorhodopsin gene, partial cds. KJ928054 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTCTGACAGTTCCTCTGCAACTCGTCGAGTTCTACTTGATACTTGCGGCAGTTGCTGCAGTGTCCGGCGGCATTTTCTGGAGGATCTTCATCGGATCTTTGGTAATGTTGGTGCCCGGCTATATGGGTGAGGCTGGATACTTAAATTCCACTGTAGGTTTTGTAATCGGAATGCTCGGATGGGCGTTCATCCTTTACGAAATCCATGCTGGCGAAGCGAGCAAAGTCAGCGCCGCATCAGCTTCCGCGGCCACACAGAGTTCGTTTACTATGATGAAGTGGGTTGTTACGGTC LLTVPLQLVEFYLILAAVAAVSGGIFWRIFIGSLVMLVPGYMGEAGYLNSTVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTGACAGTTCCTCTGCAACTCGTCGAGTTCTACTTGATACTTGCGGCA---------GTT---GCTGCAGTGTCCGGC---GGCATT------------------------------------TTCTGGAGG---ATCTTCATCGGATCTTTGGTAATGTTGGTGCCCGGCTATATGGGTGAG---------GCT------------------GGA------TAC---------------------------------TTA------------------------------------------------------------------AATTCC------------------ACTGTAGGT---TTTGTAATCGGAATGCTCGGATGGGCGTTCATCCTTTACGAAATC---------------CAT------GCT---GGCGAAGCGAGCAAAGTCAGCGCCGCA------TCA---GCTTCCGCGGCCACA---CAG---AGT---TCG---TTT---ACT---ATGATG---AAGTGGGTTGTTACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFIGSLVMLVPGYMGE---A------G--Y-----------L----------------------NS------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928046 [III-Gamma4-OM60] PRGD_OTU023_14e8982b93f0902568b3191ac2361c03 gb|KJ928046| PRGD_OTU023_14e8982b93f0902568b3191ac2361c03, putative proteorhodopsin gene, partial cds. PRGD_OTU023_14e8982b93f0902568b3191ac2361c03, putative proteorhodopsin gene, partial cds. KJ928046 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTCTGACAGTTCCACTGCAACTCGTCGAGTTCTACTTAATACTTGCGGCAGTTGCTGCGGTGTCCGGCGGCATTTTCTGGAGGATCTTTATCGGATCCCTTGTAATGTTGGTACCCGGCTATATGGGTGAGGCTGGATACTTAAACTCCACTGTAGGGTTTGTAATCGGAATGCTCGGATGGGCGTTCATCCTTTACGAAATCCATGCTGGCGAAGCGAGCAAAGTCAGCGCCGCATCAGCTTCCGCGGCCACTCAGAGCTCGTTTACTATGATGAAGTGGGTTGTCACGGTC LLTVPLQLVEFYLILAAVAAVSGGIFWRIFIGSLVMLVPGYMGEAGYLNSTVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTGACAGTTCCACTGCAACTCGTCGAGTTCTACTTAATACTTGCGGCA---------GTT---GCTGCGGTGTCCGGC---GGCATT------------------------------------TTCTGGAGG---ATCTTTATCGGATCCCTTGTAATGTTGGTACCCGGCTATATGGGTGAG---------GCT------------------GGA------TAC---------------------------------TTA------------------------------------------------------------------AACTCC------------------ACTGTAGGG---TTTGTAATCGGAATGCTCGGATGGGCGTTCATCCTTTACGAAATC---------------CAT------GCT---GGCGAAGCGAGCAAAGTCAGCGCCGCA------TCA---GCTTCCGCGGCCACT---CAG---AGC---TCG---TTT---ACT---ATGATG---AAGTGGGTTGTCACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFIGSLVMLVPGYMGE---A------G--Y-----------L----------------------NS------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928064 [III-Gamma4-OM60] PRGD_OTU023_90563d59a180b8725004ea4e0c991540 gb|KJ928064| PRGD_OTU023_90563d59a180b8725004ea4e0c991540, putative proteorhodopsin gene, partial cds. PRGD_OTU023_90563d59a180b8725004ea4e0c991540, putative proteorhodopsin gene, partial cds. KJ928064 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTCCTGACAGTTCCACTGCAGCTCGTCGAGTTCTACCTAATACTTGCGGCAGTTGCTGCAGTGTCCGGCGGCATTTTCTGGAGGATTTTTATCGGGTCTTTGGTAATGTTAGTGCCCGGATATATGGGTGAGGCTGGTTACCTAAACTCCACAGTTGGTTTTGTAATTGGAATGCTCGGATGGGCGTTCATACTTTACGAAATTCATGCTGGCGAAGCGAGCAAAGTCAGCGCCGCGTCAGCTTCCGCGGCCACACAGAGCTCATTCACCATGATGAAGTGGGTTGTGACAGTC LLTVPLQLVEFYLILAAVAAVSGGIFWRIFIGSLVMLVPGYMGEAGYLNSTVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTGACAGTTCCACTGCAGCTCGTCGAGTTCTACCTAATACTTGCGGCA---------GTT---GCTGCAGTGTCCGGC---GGCATT------------------------------------TTCTGGAGG---ATTTTTATCGGGTCTTTGGTAATGTTAGTGCCCGGATATATGGGTGAG---------GCT------------------GGT------TAC---------------------------------CTA------------------------------------------------------------------AACTCC------------------ACAGTTGGT---TTTGTAATTGGAATGCTCGGATGGGCGTTCATACTTTACGAAATT---------------CAT------GCT---GGCGAAGCGAGCAAAGTCAGCGCCGCG------TCA---GCTTCCGCGGCCACA---CAG---AGC---TCA---TTC---ACC---ATGATG---AAGTGGGTTGTGACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFIGSLVMLVPGYMGE---A------G--Y-----------L----------------------NS------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928050 [III-Gamma4-OM60] PRGD_OTU023_4ad8254b6701b42a440fad0e5ba841fe gb|KJ928050| PRGD_OTU023_4ad8254b6701b42a440fad0e5ba841fe, putative proteorhodopsin gene, partial cds. PRGD_OTU023_4ad8254b6701b42a440fad0e5ba841fe, putative proteorhodopsin gene, partial cds. KJ928050 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTCTGACAGTGCCACTGCAACTCGTCGAGTTCTATCTAATACTGGCGGCAGTTGCTGCGGTGTCCGGCGGCATTTTCTGGAGGATTTTCGTCGGATCCTTGGTAATGTTGGTGCCCGGCTATATGGGTGAGGCTGGATACTTAAATTCCACTGTAGGTTTTGTAATCGGTATGCTCGGATGGGCGTTCATCCTTTACGAAATCCATGCTGGCGAAGCGAGCAAGGTCAGCGCCGCATCAGCTTCCGCGGCCACACAGAGCTCGTTTACCATGATGAAGTGGGTTGTCACGGTC LLTVPLQLVEFYLILAAVAAVSGGIFWRIFVGSLVMLVPGYMGEAGYLNSTVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTGACAGTGCCACTGCAACTCGTCGAGTTCTATCTAATACTGGCGGCA---------GTT---GCTGCGGTGTCCGGC---GGCATT------------------------------------TTCTGGAGG---ATTTTCGTCGGATCCTTGGTAATGTTGGTGCCCGGCTATATGGGTGAG---------GCT------------------GGA------TAC---------------------------------TTA------------------------------------------------------------------AATTCC------------------ACTGTAGGT---TTTGTAATCGGTATGCTCGGATGGGCGTTCATCCTTTACGAAATC---------------CAT------GCT---GGCGAAGCGAGCAAGGTCAGCGCCGCA------TCA---GCTTCCGCGGCCACA---CAG---AGC---TCG---TTT---ACC---ATGATG---AAGTGGGTTGTCACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFVGSLVMLVPGYMGE---A------G--Y-----------L----------------------NS------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928069 [III-Gamma4-OM60] PRGD_OTU023_a53f0b6127182ec231472a057e6d9ed4 gb|KJ928069| PRGD_OTU023_a53f0b6127182ec231472a057e6d9ed4, putative proteorhodopsin gene, partial cds. PRGD_OTU023_a53f0b6127182ec231472a057e6d9ed4, putative proteorhodopsin gene, partial cds. KJ928069 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTACTAACAGTGCCACTGCAGCTTGTCGAGTTCTATCTGATACTGGCGGCAGTTGCTGCGGTGTCCGGCGGCATTTTCTGGAGGATCTTTATCGGATCCTTGGTAATGTTGGTGCCCGGCTACATGGGTGAGGCTGGATACTTAAATTCCACTGTTGGTTTTGTAATCGGAATGCTCGGTTGGGCATTCATCCTTTACGAAATCCATGCTGGCGAAGCGAGCAAAGTCAGCGCTGCATCAGCTTCCGCGGCCACACAGAGTTCGTTCACTATGATGAAGTGGGTTGTCACGGTC LLTVPLQLVEFYLILAAVAAVSGGIFWRIFIGSLVMLVPGYMGEAGYLNSTVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTAACAGTGCCACTGCAGCTTGTCGAGTTCTATCTGATACTGGCGGCA---------GTT---GCTGCGGTGTCCGGC---GGCATT------------------------------------TTCTGGAGG---ATCTTTATCGGATCCTTGGTAATGTTGGTGCCCGGCTACATGGGTGAG---------GCT------------------GGA------TAC---------------------------------TTA------------------------------------------------------------------AATTCC------------------ACTGTTGGT---TTTGTAATCGGAATGCTCGGTTGGGCATTCATCCTTTACGAAATC---------------CAT------GCT---GGCGAAGCGAGCAAAGTCAGCGCTGCA------TCA---GCTTCCGCGGCCACA---CAG---AGT---TCG---TTC---ACT---ATGATG---AAGTGGGTTGTCACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFIGSLVMLVPGYMGE---A------G--Y-----------L----------------------NS------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928070 [III-Gamma4-OM60] PRGD_OTU023_a946b8e597843eb8daf6c21853d3f35f gb|KJ928070| PRGD_OTU023_a946b8e597843eb8daf6c21853d3f35f, putative proteorhodopsin gene, partial cds. PRGD_OTU023_a946b8e597843eb8daf6c21853d3f35f, putative proteorhodopsin gene, partial cds. KJ928070 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTTCTGACAGTTCCACTGCAGCTCGTCGAGTTCTATCTAATACTTGCGGCAGTTGCCGCGGTGTCCGGCGGCATTTTCTGGAGGATCTTTATCGGATCTTTGGTAATGTTGGTGCCCGGCTACATGGGTGAGGCTGGATACTTAAATTCCACTGTAGGATTTGTAATCGGAATGCTCGGATGGGCGTTCATCCTTTACGAAATCCATGCTGGCGAAGCGAGCAAAGTCAGCGCCGCATCAGCTTCCGCGGCCACACAGAGCTCGTTTACTATGATGAAGTGGGTTGTTACGGTC LLTVPLQLVEFYLILAAVAAVSGGIFWRIFIGSLVMLVPGYMGEAGYLNSTVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTGACAGTTCCACTGCAGCTCGTCGAGTTCTATCTAATACTTGCGGCA---------GTT---GCCGCGGTGTCCGGC---GGCATT------------------------------------TTCTGGAGG---ATCTTTATCGGATCTTTGGTAATGTTGGTGCCCGGCTACATGGGTGAG---------GCT------------------GGA------TAC---------------------------------TTA------------------------------------------------------------------AATTCC------------------ACTGTAGGA---TTTGTAATCGGAATGCTCGGATGGGCGTTCATCCTTTACGAAATC---------------CAT------GCT---GGCGAAGCGAGCAAAGTCAGCGCCGCA------TCA---GCTTCCGCGGCCACA---CAG---AGC---TCG---TTT---ACT---ATGATG---AAGTGGGTTGTTACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFIGSLVMLVPGYMGE---A------G--Y-----------L----------------------NS------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928048 [III-Gamma4-OM60] PRGD_OTU023_3991e025cdb74a3230010ed552a41534 gb|KJ928048| PRGD_OTU023_3991e025cdb74a3230010ed552a41534, putative proteorhodopsin gene, partial cds. PRGD_OTU023_3991e025cdb74a3230010ed552a41534, putative proteorhodopsin gene, partial cds. KJ928048 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTACTGACCGTTCCACTGCAGCTCGTCGAGTTCTATCTGATACTCGCGGCAGTTGCTGCGGTGTCCGGCGGCATCTTCTGGAGGATCTTTATCGGGTCTTTGGTGATGTTGGTACCAGGCTATATGGGTGAGGCTGGCTACTTAAATTCAACAGTAGGGTTTGTAATCGGAATGCTCGGATGGGGTTTCATCCTCTACGAAATCCATGCTGGCGAAGCAAGCAAAGTCAGCGCCGCATCAGCTTCCGCGGCCACACAGAGCTCTTTCACTATGATGAAGTGGGTTGTCACGGTA LLTVPLQLVEFYLILAAVAAVSGGIFWRIFIGSLVMLVPGYMGEAGYLNSTVGFVIGMLGWGFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTGACCGTTCCACTGCAGCTCGTCGAGTTCTATCTGATACTCGCGGCA---------GTT---GCTGCGGTGTCCGGC---GGCATC------------------------------------TTCTGGAGG---ATCTTTATCGGGTCTTTGGTGATGTTGGTACCAGGCTATATGGGTGAG---------GCT------------------GGC------TAC---------------------------------TTA------------------------------------------------------------------AATTCA------------------ACAGTAGGG---TTTGTAATCGGAATGCTCGGATGGGGTTTCATCCTCTACGAAATC---------------CAT------GCT---GGCGAAGCAAGCAAAGTCAGCGCCGCA------TCA---GCTTCCGCGGCCACA---CAG---AGC---TCT---TTC---ACT---ATGATG---AAGTGGGTTGTCACGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFIGSLVMLVPGYMGE---A------G--Y-----------L----------------------NS------TVG-FVIGMLGWGFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928063 [III-Gamma4-OM60] PRGD_OTU023_904f89af5c73337e0cbb6b5a07dde9f4 gb|KJ928063| PRGD_OTU023_904f89af5c73337e0cbb6b5a07dde9f4, putative proteorhodopsin gene, partial cds. PRGD_OTU023_904f89af5c73337e0cbb6b5a07dde9f4, putative proteorhodopsin gene, partial cds. KJ928063 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTACTGACAGTTCCACTTCAGCTTGTGGAGTTCTATCTGATACTTGCGGCAGTTGCTGCGGTTTCTGGTGGCATTTTCTGGAGGATCTTTATCGGATCTTTGGTAATGTTGGTGCCCGGCTATATGGGTGAGGCTGGTTACTTAAATTCTACAGTAGGATTTGTAATCGGAATGCTCGGATGGGGATTCATTCTTTACGAAATCCATGCTGGCGAAGCGAGCAAAGTCAGCGCCGCATCAGCTTCCGCGGCTACACAGAGCTCGTTTACTATGATGAAGTGGGTTGTTACTGTT LLTVPLQLVEFYLILAAVAAVSGGIFWRIFIGSLVMLVPGYMGEAGYLNSTVGFVIGMLGWGFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTGACAGTTCCACTTCAGCTTGTGGAGTTCTATCTGATACTTGCGGCA---------GTT---GCTGCGGTTTCTGGT---GGCATT------------------------------------TTCTGGAGG---ATCTTTATCGGATCTTTGGTAATGTTGGTGCCCGGCTATATGGGTGAG---------GCT------------------GGT------TAC---------------------------------TTA------------------------------------------------------------------AATTCT------------------ACAGTAGGA---TTTGTAATCGGAATGCTCGGATGGGGATTCATTCTTTACGAAATC---------------CAT------GCT---GGCGAAGCGAGCAAAGTCAGCGCCGCA------TCA---GCTTCCGCGGCTACA---CAG---AGC---TCG---TTT---ACT---ATGATG---AAGTGGGTTGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFIGSLVMLVPGYMGE---A------G--Y-----------L----------------------NS------TVG-FVIGMLGWGFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928052 [III-Gamma4-OM60] PRGD_OTU023_62bfed2c5393e3b7b7751c2429e80ec9 gb|KJ928052| PRGD_OTU023_62bfed2c5393e3b7b7751c2429e80ec9, putative proteorhodopsin gene, partial cds. PRGD_OTU023_62bfed2c5393e3b7b7751c2429e80ec9, putative proteorhodopsin gene, partial cds. KJ928052 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTCTGACAGTTCCTCTGCAGCTAGTCGAGTTCTATCTGATACTTGCGGCAGTTGCTGCGGTTTCCGGCGGCATTTTCTGGAGGATCTTTGTCGGGTCTTTGGTAATGTTAGTTCCCGGCTATATGGGTGAGGCTGGTTACTTAAATTCCACAGTAGGATTCGTTATCGGAATGCTCGGATGGGCTTTTATTCTTTACGAGATCCATGCTGGCGAAGCGAGCAAAGTCAGCGCCGCATCAGCGTCCGCGGCCACACAGAGCTCGTTCACGATGATGAAGTGGGTTGTTACGGTT LLTVPLQLVEFYLILAAVAAVSGGIFWRIFVGSLVMLVPGYMGEAGYLNSTVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTGACAGTTCCTCTGCAGCTAGTCGAGTTCTATCTGATACTTGCGGCA---------GTT---GCTGCGGTTTCCGGC---GGCATT------------------------------------TTCTGGAGG---ATCTTTGTCGGGTCTTTGGTAATGTTAGTTCCCGGCTATATGGGTGAG---------GCT------------------GGT------TAC---------------------------------TTA------------------------------------------------------------------AATTCC------------------ACAGTAGGA---TTCGTTATCGGAATGCTCGGATGGGCTTTTATTCTTTACGAGATC---------------CAT------GCT---GGCGAAGCGAGCAAAGTCAGCGCCGCA------TCA---GCGTCCGCGGCCACA---CAG---AGC---TCG---TTC---ACG---ATGATG---AAGTGGGTTGTTACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFVGSLVMLVPGYMGE---A------G--Y-----------L----------------------NS------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928053 [III-Gamma4-OM60] PRGD_OTU023_65d016896d109587f72d07283519033d gb|KJ928053| PRGD_OTU023_65d016896d109587f72d07283519033d, putative proteorhodopsin gene, partial cds. PRGD_OTU023_65d016896d109587f72d07283519033d, putative proteorhodopsin gene, partial cds. KJ928053 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTTCTGACAGTCCCTCTGCAGCTAGTCGAGTTCTATCTGATACTTGCGGCAGTTGCTGCGGTTTCCGGCGGCATTTTCTGGAGGATCTTTGTCGGGTCTTTGGTAATGTTAGTTCCCGGCTATATGGGTGAGGCTGGTTACTTAAATTCCACAGTAGGATTCGTTATCGGAATGCTCGGATGGGCTTTTATCCTTTACGAGATCCATGCTGGCGAAGCGAGCAAAGTCAGCGCCGCATCAGCGTCCGCGGCCACACAGAGCTCGTTCACGATGATGAAGTGGGTTGTTACGGTT LLTVPLQLVEFYLILAAVAAVSGGIFWRIFVGSLVMLVPGYMGEAGYLNSTVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTGACAGTCCCTCTGCAGCTAGTCGAGTTCTATCTGATACTTGCGGCA---------GTT---GCTGCGGTTTCCGGC---GGCATT------------------------------------TTCTGGAGG---ATCTTTGTCGGGTCTTTGGTAATGTTAGTTCCCGGCTATATGGGTGAG---------GCT------------------GGT------TAC---------------------------------TTA------------------------------------------------------------------AATTCC------------------ACAGTAGGA---TTCGTTATCGGAATGCTCGGATGGGCTTTTATCCTTTACGAGATC---------------CAT------GCT---GGCGAAGCGAGCAAAGTCAGCGCCGCA------TCA---GCGTCCGCGGCCACA---CAG---AGC---TCG---TTC---ACG---ATGATG---AAGTGGGTTGTTACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFVGSLVMLVPGYMGE---A------G--Y-----------L----------------------NS------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928079 [III-Gamma4-OM60] PRGD_OTU023_f1d21d7735b3aca5912512f59e737bbb gb|KJ928079| PRGD_OTU023_f1d21d7735b3aca5912512f59e737bbb, putative proteorhodopsin gene, partial cds. PRGD_OTU023_f1d21d7735b3aca5912512f59e737bbb, putative proteorhodopsin gene, partial cds. KJ928079 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTCTGACAGTTCCTCTACAGCTAGTCGAGTTCTACCTGATACTTGCGGCAGTTGCTGCGGTATCCGGCGGCATTTTCTGGAGAATCTTTGTCGGGTCTTTGGTAATGTTAGTGCCCGGCTATATGGGTGAGGCTGGCTACTTAAATGCCACAGTAGGATTTGTTATCGGAATGCTCGGATGGGCTTTTATCCTTTACGAGATCCATGCTGGCGAAGCGAGCAAAGTCAGCGCCGCATCAGCGTCCGCGGCCACACAGAGCTCGTTCACGATGATGAAGTGGGTTGTTACGGTT LLTVPLQLVEFYLILAAVAAVSGGIFWRIFVGSLVMLVPGYMGEAGYLNATVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTGACAGTTCCTCTACAGCTAGTCGAGTTCTACCTGATACTTGCGGCA---------GTT---GCTGCGGTATCCGGC---GGCATT------------------------------------TTCTGGAGA---ATCTTTGTCGGGTCTTTGGTAATGTTAGTGCCCGGCTATATGGGTGAG---------GCT------------------GGC------TAC---------------------------------TTA------------------------------------------------------------------AATGCC------------------ACAGTAGGA---TTTGTTATCGGAATGCTCGGATGGGCTTTTATCCTTTACGAGATC---------------CAT------GCT---GGCGAAGCGAGCAAAGTCAGCGCCGCA------TCA---GCGTCCGCGGCCACA---CAG---AGC---TCG---TTC---ACG---ATGATG---AAGTGGGTTGTTACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFVGSLVMLVPGYMGE---A------G--Y-----------L----------------------NA------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928057 [III-Gamma4-OM60] PRGD_OTU023_71148d674b066df8d3e79372c1ee7ace gb|KJ928057| PRGD_OTU023_71148d674b066df8d3e79372c1ee7ace, putative proteorhodopsin gene, partial cds. PRGD_OTU023_71148d674b066df8d3e79372c1ee7ace, putative proteorhodopsin gene, partial cds. KJ928057 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTACTCACAGTTCCACTGCAGCTAGTCGAGTTCTACCTGATACTTGCGGCAGTTGCTGCGGTGTCCGGCGGCATTTTCTGGAGGATCTTTGTCGGATCTCTGGTAATGTTAGTGCCCGGCTATATGGGTGAGGCTGGATATTTAAACTCCACGGTTGGATTTGTAATTGGAATGCTCGGATGGGCGTTCATCCTCTACGAAATCCATGCTGGCGAAGCGAGCAAAGTTAGCGCCGCATCAGCTTCCGCGGCCACACAAAGCTCATTCACTATGATGAAGTGGGTTGTTACGGTT LLTVPLQLVEFYLILAAVAAVSGGIFWRIFVGSLVMLVPGYMGEAGYLNSTVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTCACAGTTCCACTGCAGCTAGTCGAGTTCTACCTGATACTTGCGGCA---------GTT---GCTGCGGTGTCCGGC---GGCATT------------------------------------TTCTGGAGG---ATCTTTGTCGGATCTCTGGTAATGTTAGTGCCCGGCTATATGGGTGAG---------GCT------------------GGA------TAT---------------------------------TTA------------------------------------------------------------------AACTCC------------------ACGGTTGGA---TTTGTAATTGGAATGCTCGGATGGGCGTTCATCCTCTACGAAATC---------------CAT------GCT---GGCGAAGCGAGCAAAGTTAGCGCCGCA------TCA---GCTTCCGCGGCCACA---CAA---AGC---TCA---TTC---ACT---ATGATG---AAGTGGGTTGTTACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFVGSLVMLVPGYMGE---A------G--Y-----------L----------------------NS------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928065 [III-Gamma4-OM60] PRGD_OTU023_907020495644349a88cafed133ce2029 gb|KJ928065| PRGD_OTU023_907020495644349a88cafed133ce2029, putative proteorhodopsin gene, partial cds. PRGD_OTU023_907020495644349a88cafed133ce2029, putative proteorhodopsin gene, partial cds. KJ928065 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) CTACTCACAGTTCCACTGCAGCTAGTCGAGTTCTACCTGATACTTGCGGCAGTTGCTGCGGTGTCCGGCGGCATTTTCTGGAGGATCTTTGTCGGATCTCTGGTAATGTTAGTGCCCGGCTATATGGGTGAGGCTGGATATTTGAATTCCACGGTTGGATTTGTAATTGGAATGCTCGGATGGGCGTTCATCCTCTACGAGATCCATGCTGGCGAAGCGAGCAAAGTTAGCGCCGCATCAGCTTCCGCGGCCACACAAAGCTCATTCACTATGATGAAGTGGGTTGTTACGGTT LLTVPLQLVEFYLILAAVAAVSGGIFWRIFVGSLVMLVPGYMGEAGYLNSTVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTCACAGTTCCACTGCAGCTAGTCGAGTTCTACCTGATACTTGCGGCA---------GTT---GCTGCGGTGTCCGGC---GGCATT------------------------------------TTCTGGAGG---ATCTTTGTCGGATCTCTGGTAATGTTAGTGCCCGGCTATATGGGTGAG---------GCT------------------GGA------TAT---------------------------------TTG------------------------------------------------------------------AATTCC------------------ACGGTTGGA---TTTGTAATTGGAATGCTCGGATGGGCGTTCATCCTCTACGAGATC---------------CAT------GCT---GGCGAAGCGAGCAAAGTTAGCGCCGCA------TCA---GCTTCCGCGGCCACA---CAA---AGC---TCA---TTC---ACT---ATGATG---AAGTGGGTTGTTACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFVGSLVMLVPGYMGE---A------G--Y-----------L----------------------NS------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928061 [III-Gamma4-OM60] PRGD_OTU023_77a63dce8a622ad547587dabe6ab19f0 gb|KJ928061| PRGD_OTU023_77a63dce8a622ad547587dabe6ab19f0, putative proteorhodopsin gene, partial cds. PRGD_OTU023_77a63dce8a622ad547587dabe6ab19f0, putative proteorhodopsin gene, partial cds. KJ928061 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTTTTGACGGTTCCACTGCAACTAGTCGAATTCTATTTGATACTCGCGGCAGTTGCTGCGGTGTCCGGCGGCATTTTCTGGAGGATCTTTATCGGATCTTTGGTAATGCTGGTGCCCGGCTATATGGGTGAGGCTGGATACCTAAATTCCACAGTAGGATTTGTAATCGGAATGCTCGGATGGGCGTTCATCCTTTACGAAATCCATGCTGGCGAAGCGAGTAAAGTAAGCGCCGCATCAGCTTCCGCGGCAACACAGAGCTCGTTCACTATGATGAAATGGGTTGTTACGGTT LLTVPLQLVEFYLILAAVAAVSGGIFWRIFIGSLVMLVPGYMGEAGYLNSTVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTGACGGTTCCACTGCAACTAGTCGAATTCTATTTGATACTCGCGGCA---------GTT---GCTGCGGTGTCCGGC---GGCATT------------------------------------TTCTGGAGG---ATCTTTATCGGATCTTTGGTAATGCTGGTGCCCGGCTATATGGGTGAG---------GCT------------------GGA------TAC---------------------------------CTA------------------------------------------------------------------AATTCC------------------ACAGTAGGA---TTTGTAATCGGAATGCTCGGATGGGCGTTCATCCTTTACGAAATC---------------CAT------GCT---GGCGAAGCGAGTAAAGTAAGCGCCGCA------TCA---GCTTCCGCGGCAACA---CAG---AGC---TCG---TTC---ACT---ATGATG---AAATGGGTTGTTACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFIGSLVMLVPGYMGE---A------G--Y-----------L----------------------NS------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928073 [III-Gamma4-OM60] PRGD_OTU023_c06e02e3a320cdd766c7b29fd83bf8fb gb|KJ928073| PRGD_OTU023_c06e02e3a320cdd766c7b29fd83bf8fb, putative proteorhodopsin gene, partial cds. PRGD_OTU023_c06e02e3a320cdd766c7b29fd83bf8fb, putative proteorhodopsin gene, partial cds. KJ928073 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTTTTGACGGTTCCACTGCAACTCGTCGAGTTCTATCTAATACTTGCGGCAGTTGCTGCGGTGTCCGGCGGCATTTTCTGGAGGATCTTCATCGGATCTTTGGTGATGTTGGTGCCCGGCTATATGGGTGAGGCTGGATACCTAAATTCCACAGTAGGGTTTGTAATCGGAATGCTCGGATGGGCGTTCATCCTTTACGAAATCCATGCTGGCGAAGCGAGCAAAGTAAGCGCCGCATCAGCTTCCGCGGCAACACAGAGCTCGTTCACTATGATGAAATGGGTTGTTACGGTT LLTVPLQLVEFYLILAAVAAVSGGIFWRIFIGSLVMLVPGYMGEAGYLNSTVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTGACGGTTCCACTGCAACTCGTCGAGTTCTATCTAATACTTGCGGCA---------GTT---GCTGCGGTGTCCGGC---GGCATT------------------------------------TTCTGGAGG---ATCTTCATCGGATCTTTGGTGATGTTGGTGCCCGGCTATATGGGTGAG---------GCT------------------GGA------TAC---------------------------------CTA------------------------------------------------------------------AATTCC------------------ACAGTAGGG---TTTGTAATCGGAATGCTCGGATGGGCGTTCATCCTTTACGAAATC---------------CAT------GCT---GGCGAAGCGAGCAAAGTAAGCGCCGCA------TCA---GCTTCCGCGGCAACA---CAG---AGC---TCG---TTC---ACT---ATGATG---AAATGGGTTGTTACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFIGSLVMLVPGYMGE---A------G--Y-----------L----------------------NS------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928051 [III-Gamma4-OM60] PRGD_OTU023_4f39ffd4323f575c6f135386bc683f06 gb|KJ928051| PRGD_OTU023_4f39ffd4323f575c6f135386bc683f06, putative proteorhodopsin gene, partial cds. PRGD_OTU023_4f39ffd4323f575c6f135386bc683f06, putative proteorhodopsin gene, partial cds. KJ928051 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) CTCTTAACAGTCCCACTGCAGCTCGTCGAGTTCTATCTGATACTTGCGGCAGTTGCCGCGGTGTCCGGCGGCATTTTCTGGAGGATCTTTATCGGATCTTTGGTAATGTTAGTGCCCGGCTATATGGGTGAGGCTGGATACTTGAATGCCACAGTAGGGTTTGTAATTGGAATGCTCGGATGGGCATTCATCCTTTACGAAATCCATGCTGGCGAAGCGAGCAAAGTAAGCGCAGCATCAGCATCCGCGGCCACACAGAGCTCATTCACTATGATGAAGTGGGTTGTTACGGTT LLTVPLQLVEFYLILAAVAAVSGGIFWRIFIGSLVMLVPGYMGEAGYLNATVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACAGTCCCACTGCAGCTCGTCGAGTTCTATCTGATACTTGCGGCA---------GTT---GCCGCGGTGTCCGGC---GGCATT------------------------------------TTCTGGAGG---ATCTTTATCGGATCTTTGGTAATGTTAGTGCCCGGCTATATGGGTGAG---------GCT------------------GGA------TAC---------------------------------TTG------------------------------------------------------------------AATGCC------------------ACAGTAGGG---TTTGTAATTGGAATGCTCGGATGGGCATTCATCCTTTACGAAATC---------------CAT------GCT---GGCGAAGCGAGCAAAGTAAGCGCAGCA------TCA---GCATCCGCGGCCACA---CAG---AGC---TCA---TTC---ACT---ATGATG---AAGTGGGTTGTTACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFIGSLVMLVPGYMGE---A------G--Y-----------L----------------------NA------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928055 [III-Gamma4-OM60] PRGD_OTU023_6c9bfab57cca7e2eca9604026625266a gb|KJ928055| PRGD_OTU023_6c9bfab57cca7e2eca9604026625266a, putative proteorhodopsin gene, partial cds. PRGD_OTU023_6c9bfab57cca7e2eca9604026625266a, putative proteorhodopsin gene, partial cds. KJ928055 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTCTGACAGTTCCTCTGCAACTCGTCGAGTTCTATCTAATACTTGCGGCAGTTGCTGCGGTGTCCGGCGGCATTTTCTGGAGGATCTTCATCGGATCTTTGGTAATGTTGGTGCCCGGCTATATGGGTGAGGCTGGCTACCTAAATGCCACAGTGGGCTTTGTAATCGGAATGCTCGGATGGGCGTTCATCCTTTACGAAATCCACGCTGGTGAAGCGAGCAAAGTCAGCGCCGCATCAGCTTCCGCGGCCACGCAGAGCTCGTTCACTATGATGAAGTGGGTAGTTACAGTT LLTVPLQLVEFYLILAAVAAVSGGIFWRIFIGSLVMLVPGYMGEAGYLNATVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTGACAGTTCCTCTGCAACTCGTCGAGTTCTATCTAATACTTGCGGCA---------GTT---GCTGCGGTGTCCGGC---GGCATT------------------------------------TTCTGGAGG---ATCTTCATCGGATCTTTGGTAATGTTGGTGCCCGGCTATATGGGTGAG---------GCT------------------GGC------TAC---------------------------------CTA------------------------------------------------------------------AATGCC------------------ACAGTGGGC---TTTGTAATCGGAATGCTCGGATGGGCGTTCATCCTTTACGAAATC---------------CAC------GCT---GGTGAAGCGAGCAAAGTCAGCGCCGCA------TCA---GCTTCCGCGGCCACG---CAG---AGC---TCG---TTC---ACT---ATGATG---AAGTGGGTAGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFIGSLVMLVPGYMGE---A------G--Y-----------L----------------------NA------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928080 [III-Gamma4-OM60] PRGD_OTU023_f7548da729d4d814c0c1863ddc1c2df8 gb|KJ928080| PRGD_OTU023_f7548da729d4d814c0c1863ddc1c2df8, putative proteorhodopsin gene, partial cds. PRGD_OTU023_f7548da729d4d814c0c1863ddc1c2df8, putative proteorhodopsin gene, partial cds. KJ928080 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) CTTCTGACAGTTCCTCTGCAACTCGTCGAGTTCTATCTAATACTTGCGGCAGTTGCTGCGGTGTCCGGCGGCATTTTCTGGAGGATCTTCATCGGATCTTTGGTAATGTTGGTGCCCGGCTATATGGGTGAGGCTGGCTACTTAAATTCCACAGTGGGCTTTGTAATCGGAATGCTCGGATGGGCGTTCATCCTTTACGAAATCCATGCTGGTGAAGCGAGCAAAGTCAGCGCCGCATCAGCTTCCGCGGCCACGCAGAGCTCGTTCACTATGATGAAGTGGGTAGTTACGGTT LLTVPLQLVEFYLILAAVAAVSGGIFWRIFIGSLVMLVPGYMGEAGYLNSTVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTGACAGTTCCTCTGCAACTCGTCGAGTTCTATCTAATACTTGCGGCA---------GTT---GCTGCGGTGTCCGGC---GGCATT------------------------------------TTCTGGAGG---ATCTTCATCGGATCTTTGGTAATGTTGGTGCCCGGCTATATGGGTGAG---------GCT------------------GGC------TAC---------------------------------TTA------------------------------------------------------------------AATTCC------------------ACAGTGGGC---TTTGTAATCGGAATGCTCGGATGGGCGTTCATCCTTTACGAAATC---------------CAT------GCT---GGTGAAGCGAGCAAAGTCAGCGCCGCA------TCA---GCTTCCGCGGCCACG---CAG---AGC---TCG---TTC---ACT---ATGATG---AAGTGGGTAGTTACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFIGSLVMLVPGYMGE---A------G--Y-----------L----------------------NS------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928047 [III-Gamma4-OM60] PRGD_OTU023_362c281b9300cc7d6e60805df3730d26 gb|KJ928047| PRGD_OTU023_362c281b9300cc7d6e60805df3730d26, putative proteorhodopsin gene, partial cds. PRGD_OTU023_362c281b9300cc7d6e60805df3730d26, putative proteorhodopsin gene, partial cds. KJ928047 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTACTGACGGTTCCACTGCAGCTCGTCGAGTTCTATCTAATACTGGCGGCAGTCGCTGCGGTGTCTGGCGGCATTTTCTGGAGGATCTTTATCGGATCCTTGGTAATGTTGGTGCCTGGCTACATGGGTGAGGCTGGATACTTAAATTCCACAGTAGGATTTGTTATCGGAATGCTCGGATGGGCGTTCATCCTTTACGAAATCCATGCTGGTGAAGCGAGCAAAGTCAGCGCCGCATCAGCTTCCGCGGCCACACAGAGCTCGTTCACTATGATGAAGTGGGTTGTTACGGTT LLTVPLQLVEFYLILAAVAAVSGGIFWRIFIGSLVMLVPGYMGEAGYLNSTVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTGACGGTTCCACTGCAGCTCGTCGAGTTCTATCTAATACTGGCGGCA---------GTC---GCTGCGGTGTCTGGC---GGCATT------------------------------------TTCTGGAGG---ATCTTTATCGGATCCTTGGTAATGTTGGTGCCTGGCTACATGGGTGAG---------GCT------------------GGA------TAC---------------------------------TTA------------------------------------------------------------------AATTCC------------------ACAGTAGGA---TTTGTTATCGGAATGCTCGGATGGGCGTTCATCCTTTACGAAATC---------------CAT------GCT---GGTGAAGCGAGCAAAGTCAGCGCCGCA------TCA---GCTTCCGCGGCCACA---CAG---AGC---TCG---TTC---ACT---ATGATG---AAGTGGGTTGTTACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFIGSLVMLVPGYMGE---A------G--Y-----------L----------------------NS------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928071 [III-Gamma4-OM60] PRGD_OTU023_b1040f38c5b0e55f072b64c0ad9e08ca gb|KJ928071| PRGD_OTU023_b1040f38c5b0e55f072b64c0ad9e08ca, putative proteorhodopsin gene, partial cds. PRGD_OTU023_b1040f38c5b0e55f072b64c0ad9e08ca, putative proteorhodopsin gene, partial cds. KJ928071 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTACTGACGGTTCCACTGCAGCTAGTCGAGTTCTATCTGATACTGGCGGCAGTCGCTGCGGTGTCTGGCGGCATTTTCTGGAGGATCTTTATCGGATCCTTGGTAATGTTGGTGCCTGGCTACATGGGTGAGGCTGGATACTTAAATTCCACAGTAGGATTTGTTATCGGAATGCTCGGATGGGCGTTCATCCTTTACGAAATCCATGCTGGTGAAGCGAGCAAAGTCAGCGCCGCATCAGCTTCCGCGGCCACACAGAGCTCGTTCACTATGATGAAGTGGGTTGTTACGGTT LLTVPLQLVEFYLILAAVAAVSGGIFWRIFIGSLVMLVPGYMGEAGYLNSTVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTGACGGTTCCACTGCAGCTAGTCGAGTTCTATCTGATACTGGCGGCA---------GTC---GCTGCGGTGTCTGGC---GGCATT------------------------------------TTCTGGAGG---ATCTTTATCGGATCCTTGGTAATGTTGGTGCCTGGCTACATGGGTGAG---------GCT------------------GGA------TAC---------------------------------TTA------------------------------------------------------------------AATTCC------------------ACAGTAGGA---TTTGTTATCGGAATGCTCGGATGGGCGTTCATCCTTTACGAAATC---------------CAT------GCT---GGTGAAGCGAGCAAAGTCAGCGCCGCA------TCA---GCTTCCGCGGCCACA---CAG---AGC---TCG---TTC---ACT---ATGATG---AAGTGGGTTGTTACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFIGSLVMLVPGYMGE---A------G--Y-----------L----------------------NS------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928081 [III-Gamma4-OM60] PRGD_OTU023_f8328d913ecf07e72642cb16c5e73522 gb|KJ928081| PRGD_OTU023_f8328d913ecf07e72642cb16c5e73522, putative proteorhodopsin gene, partial cds. PRGD_OTU023_f8328d913ecf07e72642cb16c5e73522, putative proteorhodopsin gene, partial cds. KJ928081 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) CTACTGACGGTTCCACTGCAGCTCGTCGAGTTTTATCTGATACTAGCGGCAGTTGCTGCGGTGTCTGGCGGCATTTTCTGGAGGATCTTTATCGGATCCTTGGTAATGTTGGTGCCTGGCTACATGGGTGAGGCTGGATACTTAAATTCCACAGTAGGATTTGTAATCGGAATGCTCGGATGGGCGTTCATCCTCTACGAAATCCATGCTGGTGAAGCGAGCAAAGTCAGCGCCGCATCAGCTTCCGCGGCCACACAGAGCTCGTTCACTATGATGAAGTGGGTTGTTACGGTT LLTVPLQLVEFYLILAAVAAVSGGIFWRIFIGSLVMLVPGYMGEAGYLNSTVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTGACGGTTCCACTGCAGCTCGTCGAGTTTTATCTGATACTAGCGGCA---------GTT---GCTGCGGTGTCTGGC---GGCATT------------------------------------TTCTGGAGG---ATCTTTATCGGATCCTTGGTAATGTTGGTGCCTGGCTACATGGGTGAG---------GCT------------------GGA------TAC---------------------------------TTA------------------------------------------------------------------AATTCC------------------ACAGTAGGA---TTTGTAATCGGAATGCTCGGATGGGCGTTCATCCTCTACGAAATC---------------CAT------GCT---GGTGAAGCGAGCAAAGTCAGCGCCGCA------TCA---GCTTCCGCGGCCACA---CAG---AGC---TCG---TTC---ACT---ATGATG---AAGTGGGTTGTTACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFIGSLVMLVPGYMGE---A------G--Y-----------L----------------------NS------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928058 [III-Gamma4-OM60] PRGD_OTU023_7238e1920bdd8ee80deac823cb583862 gb|KJ928058| PRGD_OTU023_7238e1920bdd8ee80deac823cb583862, putative proteorhodopsin gene, partial cds. PRGD_OTU023_7238e1920bdd8ee80deac823cb583862, putative proteorhodopsin gene, partial cds. KJ928058 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTACTGACAGTGCCACTGCAGCTCGTCGAGTTCTATTTGATACTGGCGGCAGTTGCTGCGGTGTCTGGCGGCATTTTCTGGAGGATCTTTATAGGGTCCTTGGTAATGTTGGTGCCCGGTTACATGGGTGAGGCTGGATACCTAAACTCCACAGTAGGATTTGTAATCGGAATGCTCGGATGGGCGTTCATCCTATACGAAATCCATGCTGGTGAAGCGAGCAAAGTCAGCGCCGCATCAGCTTCCGCTGCCACACAGAGCTCGTTCACTATGATGAAGTGGGTTGTTACAGTT LLTVPLQLVEFYLILAAVAAVSGGIFWRIFIGSLVMLVPGYMGEAGYLNSTVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTGACAGTGCCACTGCAGCTCGTCGAGTTCTATTTGATACTGGCGGCA---------GTT---GCTGCGGTGTCTGGC---GGCATT------------------------------------TTCTGGAGG---ATCTTTATAGGGTCCTTGGTAATGTTGGTGCCCGGTTACATGGGTGAG---------GCT------------------GGA------TAC---------------------------------CTA------------------------------------------------------------------AACTCC------------------ACAGTAGGA---TTTGTAATCGGAATGCTCGGATGGGCGTTCATCCTATACGAAATC---------------CAT------GCT---GGTGAAGCGAGCAAAGTCAGCGCCGCA------TCA---GCTTCCGCTGCCACA---CAG---AGC---TCG---TTC---ACT---ATGATG---AAGTGGGTTGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFIGSLVMLVPGYMGE---A------G--Y-----------L----------------------NS------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928060 [III-Gamma4-OM60] PRGD_OTU023_742f30f0bfd02bcf229f510e0965e464 gb|KJ928060| PRGD_OTU023_742f30f0bfd02bcf229f510e0965e464, putative proteorhodopsin gene, partial cds. PRGD_OTU023_742f30f0bfd02bcf229f510e0965e464, putative proteorhodopsin gene, partial cds. KJ928060 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTACTGACAGTTCCACTGCAGCTCGTCGAGTTCTATTTGATACTGGCGGCAGTTGCTGCGGTGTCTGGCGGCATTTTCTGGAGGATCTTTATCGGATCCTTGGTAATGTTGGTGCCCGGTTACATGGGTGAGGCTGGATACCTAAACTCCACAGTAGGGTTTGTAATCGGAATGCTCGGATGGGCGTTCATCCTGTACGAAATCCATGCTGGTGAAGCGAGCAAAGTCAGCGCCGCATCAGCTTCCGCGGCCACACAGAGCTCGTTCACTATGATGAAGTGGGTTGTTACGGTT LLTVPLQLVEFYLILAAVAAVSGGIFWRIFIGSLVMLVPGYMGEAGYLNSTVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTGACAGTTCCACTGCAGCTCGTCGAGTTCTATTTGATACTGGCGGCA---------GTT---GCTGCGGTGTCTGGC---GGCATT------------------------------------TTCTGGAGG---ATCTTTATCGGATCCTTGGTAATGTTGGTGCCCGGTTACATGGGTGAG---------GCT------------------GGA------TAC---------------------------------CTA------------------------------------------------------------------AACTCC------------------ACAGTAGGG---TTTGTAATCGGAATGCTCGGATGGGCGTTCATCCTGTACGAAATC---------------CAT------GCT---GGTGAAGCGAGCAAAGTCAGCGCCGCA------TCA---GCTTCCGCGGCCACA---CAG---AGC---TCG---TTC---ACT---ATGATG---AAGTGGGTTGTTACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFIGSLVMLVPGYMGE---A------G--Y-----------L----------------------NS------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928049 [III-Gamma4-OM60] PRGD_OTU023_4221e36703b328b49cda3aac282ddedd gb|KJ928049| PRGD_OTU023_4221e36703b328b49cda3aac282ddedd, putative proteorhodopsin gene, partial cds. PRGD_OTU023_4221e36703b328b49cda3aac282ddedd, putative proteorhodopsin gene, partial cds. KJ928049 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (33.762, 29.175; 33.935, 18.508), Indian Ocean (-33.28, 45.35) CTCCTGACTGTTCCACTGCAGCTCGTCGAATTTTATCTAATACTCGCAGCAGTTGCTGCGGTGTCCGGCGGCATCTTCTGGAGGATATTTGTCGGGTCTCTAGTGATGTTGGTTCCAGGTTACATGGGCGAGGCTGGTTACTTAAACGCCACCGTCGGATTTGTAATCGGAATGCTCGGATGGGCATTTATCCTCTACGAGATTCATGCGGGCGAAGCGAGTAAAGTCAGCGCGGCTTCCGCTTCCGCTGCTACGCAAAGCTCGTTCACCATGATGAAGTGGGTTGTAACGGTC LLTVPLQLVEFYLILAAVAAVSGGIFWRIFVGSLVMLVPGYMGEAGYLNATVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTGACTGTTCCACTGCAGCTCGTCGAATTTTATCTAATACTCGCAGCA---------GTT---GCTGCGGTGTCCGGC---GGCATC------------------------------------TTCTGGAGG---ATATTTGTCGGGTCTCTAGTGATGTTGGTTCCAGGTTACATGGGCGAG---------GCT------------------GGT------TAC---------------------------------TTA------------------------------------------------------------------AACGCC------------------ACCGTCGGA---TTTGTAATCGGAATGCTCGGATGGGCATTTATCCTCTACGAGATT---------------CAT------GCG---GGCGAAGCGAGTAAAGTCAGCGCGGCT------TCC---GCTTCCGCTGCTACG---CAA---AGC---TCG---TTC---ACC---ATGATG---AAGTGGGTTGTAACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFVGSLVMLVPGYMGE---A------G--Y-----------L----------------------NA------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928076 [III-Gamma4-OM60] PRGD_OTU023_d828b47d2d8931f73bcca7d59a367ef3 gb|KJ928076| PRGD_OTU023_d828b47d2d8931f73bcca7d59a367ef3, putative proteorhodopsin gene, partial cds. PRGD_OTU023_d828b47d2d8931f73bcca7d59a367ef3, putative proteorhodopsin gene, partial cds. KJ928076 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCCTAACGGTTCCACTGCAGCTCGTCGAGTTCTATCTGATCCTGGCAGCAGTTGCTGCGGTGTCCGGCGGCATCTTCTGGAGGATATTTGTCGGTTCTTTAGTAATGCTAGTTCCAGGTTACATGGGCGAAGCTGGTTACTTAAACGCCACGGTCGGCTTTGTAATCGGAATGCTCGGATGGGCATTTATCCTGTACGAGATTCATGCGGGCGAAGCGAGTAAAGTCAGCGCTGCTTCCGCTTCCGCTGCTACGCAAAGCTCGTTCACCATGATGAAGTGGGTTGTAACGGTC LLTVPLQLVEFYLILAAVAAVSGGIFWRIFVGSLVMLVPGYMGEAGYLNATVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTAACGGTTCCACTGCAGCTCGTCGAGTTCTATCTGATCCTGGCAGCA---------GTT---GCTGCGGTGTCCGGC---GGCATC------------------------------------TTCTGGAGG---ATATTTGTCGGTTCTTTAGTAATGCTAGTTCCAGGTTACATGGGCGAA---------GCT------------------GGT------TAC---------------------------------TTA------------------------------------------------------------------AACGCC------------------ACGGTCGGC---TTTGTAATCGGAATGCTCGGATGGGCATTTATCCTGTACGAGATT---------------CAT------GCG---GGCGAAGCGAGTAAAGTCAGCGCTGCT------TCC---GCTTCCGCTGCTACG---CAA---AGC---TCG---TTC---ACC---ATGATG---AAGTGGGTTGTAACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFVGSLVMLVPGYMGE---A------G--Y-----------L----------------------NA------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928068 [III-Gamma4-OM60] PRGD_OTU023_a4eada1b0d8406a865dea6691339963a gb|KJ928068| PRGD_OTU023_a4eada1b0d8406a865dea6691339963a, putative proteorhodopsin gene, partial cds. PRGD_OTU023_a4eada1b0d8406a865dea6691339963a, putative proteorhodopsin gene, partial cds. KJ928068 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTTCTTACGGTTCCACTTCAACTCGTGGAGTTCTATCTAATACTCGCGGCAGTCGCTGCTGTTTCCGGCGGCATTTTCTGGAGAATCTTCATCGGTTCCTTGGTAATGCTAGTGCCCGGCTACATGGGCGAGGCTGGTTACTTGAACGCCACAGTGGGTTTTGTGATCGGCATGCTTGGATGGGCGTTCATCCTCTACGAAATCCATGCAGGCGAAGCGAGCAAAGTCAGCGCTGCCTCAGCTTCCGCTGCCACACAAAGCTCGTTCACCATGATGAAGTGGGTTGTTACAGTT LLTVPLQLVEFYLILAAVAAVSGGIFWRIFIGSLVMLVPGYMGEAGYLNATVGFVIGMLGWAFILYEIHAGEASKVSAASASAATQSSFTMMKWVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTTACGGTTCCACTTCAACTCGTGGAGTTCTATCTAATACTCGCGGCA---------GTC---GCTGCTGTTTCCGGC---GGCATT------------------------------------TTCTGGAGA---ATCTTCATCGGTTCCTTGGTAATGCTAGTGCCCGGCTACATGGGCGAG---------GCT------------------GGT------TAC---------------------------------TTG------------------------------------------------------------------AACGCC------------------ACAGTGGGT---TTTGTGATCGGCATGCTTGGATGGGCGTTCATCCTCTACGAAATC---------------CAT------GCA---GGCGAAGCGAGCAAAGTCAGCGCTGCC------TCA---GCTTCCGCTGCCACA---CAA---AGC---TCG---TTC---ACC---ATGATG---AAGTGGGTTGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQLVEFYLILAA---V-AAVSG-GI------------FWR-IFIGSLVMLVPGYMGE---A------G--Y-----------L----------------------NA------TVG-FVIGMLGWAFILYEI-----H--A-GEASKVSAA--S-ASAAT-Q-S-S-F-T-MM-KWVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928224 [III-Gamma4-OM60] PRGD_OTU028_bca193cf2affd2cac4d92dfa79adfe29 gb|KJ928224| PRGD_OTU028_bca193cf2affd2cac4d92dfa79adfe29, putative proteorhodopsin gene, partial cds. PRGD_OTU028_bca193cf2affd2cac4d92dfa79adfe29, putative proteorhodopsin gene, partial cds. KJ928224 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTTCTCACAGTGCCGCTGTTGATGATCGAGTTCTACCTCATCCTGTCAGCAATCACTAAAGTTTCTGGTGGTATCTTCTGGCGCTTGCTGATCGGAACCCTTGTAATGTTGATTCCAGGGTACATGGGTGAGGCCGGTTACCTGAATCCCACAGTTGGCTTCGTCATCGGAATAATCGGTTGGGCATACATCTTGTTCGAAATCTTTGCCGGAGAAGCGAGTAAAGTCGCTGCTACCCAAGCGACGGCAGCCGTGCAGAAATCGTACACTCTTATGAAGTGGACTGTGTCAGTC LLTVPLLMIEFYLILSAITKVSGGIFWRLLIGTLVMLIPGYMGEAGYLNPTVGFVIGIIGWAYILFEIFAGEASKVAATQATAAVQKSYTLMKWTVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTCACAGTGCCGCTGTTGATGATCGAGTTCTACCTCATCCTGTCAGCA---------ATC---ACTAAAGTTTCTGGT---GGTATC------------------------------------TTCTGGCGC---TTGCTGATCGGAACCCTTGTAATGTTGATTCCAGGGTACATGGGTGAG---------GCC------------------GGT------TAC---------------------------------CTG------------------------------------------------------------------AATCCC------------------ACAGTTGGC---TTCGTCATCGGAATAATCGGTTGGGCATACATCTTGTTCGAAATC---------------TTT------GCC---GGAGAAGCGAGTAAAGTCGCTGCTACC------CAA---GCGACGGCAGCCGTG---CAG---AAA---TCG---TAC---ACT---CTTATG---AAGTGGACTGTGTCAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILSA---I-TKVSG-GI------------FWR-LLIGTLVMLIPGYMGE---A------G--Y-----------L----------------------NP------TVG-FVIGIIGWAYILFEI-----F--A-GEASKVAAT--Q-ATAAV-Q-K-S-Y-T-LM-KWTVSV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928228 [III-Gamma4-OM60] PRGD_OTU028_cefdaa2596c2958bc384d95b1c2c3633 gb|KJ928228| PRGD_OTU028_cefdaa2596c2958bc384d95b1c2c3633, putative proteorhodopsin gene, partial cds. PRGD_OTU028_cefdaa2596c2958bc384d95b1c2c3633, putative proteorhodopsin gene, partial cds. KJ928228 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTCTCACAGTGCCGCTGTTGATGATCGAGTTCTACCTCATCCTATCAGCAATCACTAAAGTGTCTGGTGGTATCTTCTGGCGCTTGCTGATCGGAACCCTTGTGATGTTGATTCCAGGGTACATGGGTGAAGCCGGTTACCTGAATCCCACAGTTGGCTTCGTCATCGGAATAATCGGTTGGGCATACATCTTGTTCGAAATCTTTGCCGGAGAAGCGAGTAAAGTCGCTGCCACCCAAGCGACGGCAGCCGTGCAGAAATCGTACACTCTTATGAAGTGGACTGTGTCAGTT LLTVPLLMIEFYLILSAITKVSGGIFWRLLIGTLVMLIPGYMGEAGYLNPTVGFVIGIIGWAYILFEIFAGEASKVAATQATAAVQKSYTLMKWTVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTCACAGTGCCGCTGTTGATGATCGAGTTCTACCTCATCCTATCAGCA---------ATC---ACTAAAGTGTCTGGT---GGTATC------------------------------------TTCTGGCGC---TTGCTGATCGGAACCCTTGTGATGTTGATTCCAGGGTACATGGGTGAA---------GCC------------------GGT------TAC---------------------------------CTG------------------------------------------------------------------AATCCC------------------ACAGTTGGC---TTCGTCATCGGAATAATCGGTTGGGCATACATCTTGTTCGAAATC---------------TTT------GCC---GGAGAAGCGAGTAAAGTCGCTGCCACC------CAA---GCGACGGCAGCCGTG---CAG---AAA---TCG---TAC---ACT---CTTATG---AAGTGGACTGTGTCAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILSA---I-TKVSG-GI------------FWR-LLIGTLVMLIPGYMGE---A------G--Y-----------L----------------------NP------TVG-FVIGIIGWAYILFEI-----F--A-GEASKVAAT--Q-ATAAV-Q-K-S-Y-T-LM-KWTVSV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928217 [III-Gamma4-OM60] PRGD_OTU028_6a111155fc674fc90bfe9831803cab7d gb|KJ928217| PRGD_OTU028_6a111155fc674fc90bfe9831803cab7d, putative proteorhodopsin gene, partial cds. PRGD_OTU028_6a111155fc674fc90bfe9831803cab7d, putative proteorhodopsin gene, partial cds. KJ928217 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185) CTTCTAACTGTTCCTTTATTAATGGTCGAGTTTTATCTTATATTATCCGCAATTACTAAAGTTTCCGGTGGTATATTCTGGAGATTGCTAATTGGTACCCTGGTAATGCTGATACCCGGCTACATGGGTGAGGCTGGATACCTAAATGCCACCATTGGTTTTGTAATAGGTATGGCAGGTTGGGCATACATCTTATTTGAAATCTTTGCAGGTGAAGCTAGCCGAGTTGCTGCAAGCCAAGCTACTCAAGCGGTACAAAAGTCATACAACTTGATGAAGTGGACAGTAACCATA LLTVPLLMVEFYLILSAITKVSGGIFWRLLIGTLVMLIPGYMGEAGYLNATIGFVIGMAGWAYILFEIFAGEASRVAASQATQAVQKSYNLMKWTVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTAACTGTTCCTTTATTAATGGTCGAGTTTTATCTTATATTATCCGCA---------ATT---ACTAAAGTTTCCGGT---GGTATA------------------------------------TTCTGGAGA---TTGCTAATTGGTACCCTGGTAATGCTGATACCCGGCTACATGGGTGAG---------GCT------------------GGA------TAC---------------------------------CTA------------------------------------------------------------------AATGCC------------------ACCATTGGT---TTTGTAATAGGTATGGCAGGTTGGGCATACATCTTATTTGAAATC---------------TTT------GCA---GGTGAAGCTAGCCGAGTTGCTGCAAGC------CAA---GCTACTCAAGCGGTA---CAA---AAG---TCA---TAC---AAC---TTGATG---AAGTGGACAGTAACCATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLILSA---I-TKVSG-GI------------FWR-LLIGTLVMLIPGYMGE---A------G--Y-----------L----------------------NA------TIG-FVIGMAGWAYILFEI-----F--A-GEASRVAAS--Q-ATQAV-Q-K-S-Y-N-LM-KWTVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928214 [III-Gamma4-OM60] PRGD_OTU028_48d13ae96f3248eecc27e49a982a60e1 gb|KJ928214| PRGD_OTU028_48d13ae96f3248eecc27e49a982a60e1, putative proteorhodopsin gene, partial cds. PRGD_OTU028_48d13ae96f3248eecc27e49a982a60e1, putative proteorhodopsin gene, partial cds. KJ928214 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683) CTACTAACAGTTCCATTACTGATGATTGAGTTTTACCTCATTCTTTCAGCCATCACAAAAGTTGCGGGAAGCGTTTTCTGGAAACTTTTAATCGGTACTCTCGTGATGTTAGTTCCAGGCTACATGGGTGAGGCTGGCTACTTAAATTCAACGGTTGGTTTCGTTATTGGAATGATTGGTTGGGTCTATATTCTATTCGAAATATTTGCCGGTGAGGCAAGTCGCGTTGCAGCCAACGAAGCAACCCCGGCTGTACAGAAATCGTACAACCTGATGAAATGGACAGTTACAATA LLTVPLLMIEFYLILSAITKVAGSVFWKLLIGTLVMLVPGYMGEAGYLNSTVGFVIGMIGWVYILFEIFAGEASRVAANEATPAVQKSYNLMKWTVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTAACAGTTCCATTACTGATGATTGAGTTTTACCTCATTCTTTCAGCC---------ATC---ACAAAAGTTGCGGGA---AGCGTT------------------------------------TTCTGGAAA---CTTTTAATCGGTACTCTCGTGATGTTAGTTCCAGGCTACATGGGTGAG---------GCT------------------GGC------TAC---------------------------------TTA------------------------------------------------------------------AATTCA------------------ACGGTTGGT---TTCGTTATTGGAATGATTGGTTGGGTCTATATTCTATTCGAAATA---------------TTT------GCC---GGTGAGGCAAGTCGCGTTGCAGCCAAC------GAA---GCAACCCCGGCTGTA---CAG---AAA---TCG---TAC---AAC---CTGATG---AAATGGACAGTTACAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILSA---I-TKVAG-SV------------FWK-LLIGTLVMLVPGYMGE---A------G--Y-----------L----------------------NS------TVG-FVIGMIGWVYILFEI-----F--A-GEASRVAAN--E-ATPAV-Q-K-S-Y-N-LM-KWTVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ929786 [III-Gamma4-OM60] PRGD_OTU245_otuREP_5afe05f0d6e8cb6d57a8e522739d57f6 gb|KJ929786| PRGD_OTU245_otuREP_5afe05f0d6e8cb6d57a8e522739d57f6, putative proteorhodopsin gene, partial cds. PRGD_OTU245_otuREP_5afe05f0d6e8cb6d57a8e522739d57f6, putative proteorhodopsin gene, partial cds. KJ929786 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097), English Channel (48.7717, -3.9683) CTCCTAACGGTTCCACTACTGATGATCGAGTTCTATTTGATCCTCGCAGCAATCACCAAAGTTTCTGGTGGTATCTTCTGGAGACTTTTAGTCGGAACTTTGGTTATGCTCGTTCCTGGTTACATGGGCGAGGCCGGTTACATGGATGTGACCGTAGGCTTTGTCATTGGAATGATTGGTTGGGCTTATATTCTCTACGAGATCTTCGCAGGTGAAGCAAGCAAGGTTGCTGCAGCTCAAGCGTCTGCCGCTGTTAAAAAGGCTTATGGCCTGATGAAGTGGACGGTTACATTG LLTVPLLMIEFYLILAAITKVSGGIFWRLLVGTLVMLVPGYMGEAGYMDVTVGFVIGMIGWAYILYEIFAGEASKVAAAQASAAVKKAYGLMKWTVTL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTAACGGTTCCACTACTGATGATCGAGTTCTATTTGATCCTCGCAGCA---------ATC---ACCAAAGTTTCTGGT---GGTATC------------------------------------TTCTGGAGA---CTTTTAGTCGGAACTTTGGTTATGCTCGTTCCTGGTTACATGGGCGAG---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GATGTG------------------ACCGTAGGC---TTTGTCATTGGAATGATTGGTTGGGCTTATATTCTCTACGAGATC---------------TTC------GCA---GGTGAAGCAAGCAAGGTTGCTGCAGCT------CAA---GCGTCTGCCGCTGTT---AAA---AAG---GCT---TAT---GGC---CTGATG---AAGTGGACGGTTACATTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILAA---I-TKVSG-GI------------FWR-LLVGTLVMLVPGYMGE---A------G--Y-----------M----------------------DV------TVG-FVIGMIGWAYILYEI-----F--A-GEASKVAAA--Q-ASAAV-K-K-A-Y-G-LM-KWTVTL-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ929787 [III-Gamma4-OM60] PRGD_OTU245_24e4aebf7dc6ea60e273e81e6db00e72 gb|KJ929787| PRGD_OTU245_24e4aebf7dc6ea60e273e81e6db00e72, putative proteorhodopsin gene, partial cds. PRGD_OTU245_24e4aebf7dc6ea60e273e81e6db00e72, putative proteorhodopsin gene, partial cds. KJ929787 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683) CTCCTAACGGTTCCATTATTGATGATCGAGTTCTATTTGATCCTCGCAGCGATCACCAAAGTATCTGGTGGAATTTTCTGGCGTTTGCTAATTGGAACACTGGTCATGTTAGTTCCAGGGTACATGGGCGAAGCTGGATATATGCCTGTAATGTGGGGCTTTATCATTGGAATGATCGGTTGGATTTACATCCTGTACGAGATCTTCGCTGGTGAGGCAAGTAAGGTCGCAGCCGCTCAGGCTTCAGGTGCGGTTAAGAAAGCATACGGCTTAATGAAATGGACTGTTACTCTA LLTVPLLMIEFYLILAAITKVSGGIFWRLLIGTLVMLVPGYMGEAGYMPVMWGFIIGMIGWIYILYEIFAGEASKVAAAQASGAVKKAYGLMKWTVTL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTAACGGTTCCATTATTGATGATCGAGTTCTATTTGATCCTCGCAGCG---------ATC---ACCAAAGTATCTGGT---GGAATT------------------------------------TTCTGGCGT---TTGCTAATTGGAACACTGGTCATGTTAGTTCCAGGGTACATGGGCGAA---------GCT------------------GGA------TAT---------------------------------ATG------------------------------------------------------------------CCTGTA------------------ATGTGGGGC---TTTATCATTGGAATGATCGGTTGGATTTACATCCTGTACGAGATC---------------TTC------GCT---GGTGAGGCAAGTAAGGTCGCAGCCGCT------CAG---GCTTCAGGTGCGGTT---AAG---AAA---GCA---TAC---GGC---TTAATG---AAATGGACTGTTACTCTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILAA---I-TKVSG-GI------------FWR-LLIGTLVMLVPGYMGE---A------G--Y-----------M----------------------PV------MWG-FIIGMIGWIYILYEI-----F--A-GEASKVAAA--Q-ASGAV-K-K-A-Y-G-LM-KWTVTL-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928209 [III-Gamma4-OM60] PRGD_OTU028_287c19ada385eb3af5cc9d4ea5ccdb89 gb|KJ928209| PRGD_OTU028_287c19ada385eb3af5cc9d4ea5ccdb89, putative proteorhodopsin gene, partial cds. PRGD_OTU028_287c19ada385eb3af5cc9d4ea5ccdb89, putative proteorhodopsin gene, partial cds. KJ928209 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTCCTTACTGTGCCACTTCTGATGATTGAGTTTTACTTGATCCTTGCTGCAATCGCTAATGTATCCGGTGGTATCTTTTGGCGTCTCCTCGTTGGTACACTTGTGATGCTGGTTCCTGGCTATATGGGCGAGGCGGGCATGTTGAATACAACGGTTGGCTTCGTAATTGGAATGCTTGGATGGGCCTACATCTTGTACGAAATCTTCGCTGGCGAGGCAAGCAAAGTTGCGGCTAGCCAAGCTCCCGCAGCAGTCCAAAAGTCATATACTCTTATGAAATGGACGGTCTCTGTT LLTVPLLMIEFYLILAAIANVSGGIFWRLLVGTLVMLVPGYMGEAGMLNTTVGFVIGMLGWAYILYEIFAGEASKVAASQAPAAVQKSYTLMKWTVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTTACTGTGCCACTTCTGATGATTGAGTTTTACTTGATCCTTGCTGCA---------ATC---GCTAATGTATCCGGT---GGTATC------------------------------------TTTTGGCGT---CTCCTCGTTGGTACACTTGTGATGCTGGTTCCTGGCTATATGGGCGAG---------GCG------------------GGC------ATG---------------------------------TTG------------------------------------------------------------------AATACA------------------ACGGTTGGC---TTCGTAATTGGAATGCTTGGATGGGCCTACATCTTGTACGAAATC---------------TTC------GCT---GGCGAGGCAAGCAAAGTTGCGGCTAGC------CAA---GCTCCCGCAGCAGTC---CAA---AAG---TCA---TAT---ACT---CTTATG---AAATGGACGGTCTCTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILAA---I-ANVSG-GI------------FWR-LLVGTLVMLVPGYMGE---A------G--M-----------L----------------------NT------TVG-FVIGMLGWAYILYEI-----F--A-GEASKVAAS--Q-APAAV-Q-K-S-Y-T-LM-KWTVSV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928232 [III-Gamma4-OM60] PRGD_OTU028_e69ef7f4eb6449168f9271258ea23514 gb|KJ928232| PRGD_OTU028_e69ef7f4eb6449168f9271258ea23514, putative proteorhodopsin gene, partial cds. PRGD_OTU028_e69ef7f4eb6449168f9271258ea23514, putative proteorhodopsin gene, partial cds. KJ928232 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) CTCCTTACTGTGCCACTTCTGATGATTGAGTTTTACTTGATCCTTGCTGCAATCGCTAATGTATCCGGTGGTATCTTTTGGCGTCTCCTCGTTGGTACACTTGTGATGCTGGTTCCTGGCTATATGGGCGAGGCGGGCATGTTGAATACAACGGTTGGCTTCGTAATTGGAATGCTTGGTTGGGCCTACATCTTGTACGAAATCTTCGCGGGCGAGGCAAGCAAAGTTGCGGCTAGCCAAGCTCCTGCAGCAGTCCAAAAGTCATATACTCTTATGAAATGGACGGTCTCTGTT LLTVPLLMIEFYLILAAIANVSGGIFWRLLVGTLVMLVPGYMGEAGMLNTTVGFVIGMLGWAYILYEIFAGEASKVAASQAPAAVQKSYTLMKWTVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTTACTGTGCCACTTCTGATGATTGAGTTTTACTTGATCCTTGCTGCA---------ATC---GCTAATGTATCCGGT---GGTATC------------------------------------TTTTGGCGT---CTCCTCGTTGGTACACTTGTGATGCTGGTTCCTGGCTATATGGGCGAG---------GCG------------------GGC------ATG---------------------------------TTG------------------------------------------------------------------AATACA------------------ACGGTTGGC---TTCGTAATTGGAATGCTTGGTTGGGCCTACATCTTGTACGAAATC---------------TTC------GCG---GGCGAGGCAAGCAAAGTTGCGGCTAGC------CAA---GCTCCTGCAGCAGTC---CAA---AAG---TCA---TAT---ACT---CTTATG---AAATGGACGGTCTCTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILAA---I-ANVSG-GI------------FWR-LLVGTLVMLVPGYMGE---A------G--M-----------L----------------------NT------TVG-FVIGMLGWAYILYEI-----F--A-GEASKVAAS--Q-APAAV-Q-K-S-Y-T-LM-KWTVSV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928222 [III-Gamma4-OM60] PRGD_OTU028_9955e003d88a785e9d27b2f75c350ab7 gb|KJ928222| PRGD_OTU028_9955e003d88a785e9d27b2f75c350ab7, putative proteorhodopsin gene, partial cds. PRGD_OTU028_9955e003d88a785e9d27b2f75c350ab7, putative proteorhodopsin gene, partial cds. KJ928222 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683) CTCCTAACTGTGCCACTTCTTATGATTGAGTTTTACTTAATCCTTGCGGCGATCGCTACTGTATCCGGTGGTATTTTTTGGCGCCTTCTGGTCGGTACGCTTGTCATGCTAGTCCCCGGTTATATGGGCGAGGCGGGCATGATAAATTCAACAGTTGGTTTCGTAATCGGAATGCTTGGTTGGGCTTACATCCTTTATGAAATCTTTGCTGGTGAAGCGAGCAAAGTTGCGGCTAGTCAAGCGCCTGCGGCAGTCCAAAAATCATATACTCTTATGAAGTGGACGGTCTCTGTC LLTVPLLMIEFYLILAAIATVSGGIFWRLLVGTLVMLVPGYMGEAGMINSTVGFVIGMLGWAYILYEIFAGEASKVAASQAPAAVQKSYTLMKWTVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTAACTGTGCCACTTCTTATGATTGAGTTTTACTTAATCCTTGCGGCG---------ATC---GCTACTGTATCCGGT---GGTATT------------------------------------TTTTGGCGC---CTTCTGGTCGGTACGCTTGTCATGCTAGTCCCCGGTTATATGGGCGAG---------GCG------------------GGC------ATG---------------------------------ATA------------------------------------------------------------------AATTCA------------------ACAGTTGGT---TTCGTAATCGGAATGCTTGGTTGGGCTTACATCCTTTATGAAATC---------------TTT------GCT---GGTGAAGCGAGCAAAGTTGCGGCTAGT------CAA---GCGCCTGCGGCAGTC---CAA---AAA---TCA---TAT---ACT---CTTATG---AAGTGGACGGTCTCTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILAA---I-ATVSG-GI------------FWR-LLVGTLVMLVPGYMGE---A------G--M-----------I----------------------NS------TVG-FVIGMLGWAYILYEI-----F--A-GEASKVAAS--Q-APAAV-Q-K-S-Y-T-LM-KWTVSV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928237 [III-Gamma4-OM60] PRGD_OTU028_fcc4ee59e2acb9ca8ffe19be341aecbb gb|KJ928237| PRGD_OTU028_fcc4ee59e2acb9ca8ffe19be341aecbb, putative proteorhodopsin gene, partial cds. PRGD_OTU028_fcc4ee59e2acb9ca8ffe19be341aecbb, putative proteorhodopsin gene, partial cds. KJ928237 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 01-juil-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683) CTCCTAACTGTGCCACTTCTTATGATTGAGTTTTACTTAATCCTTGCGGCGATCGCTACTGTATCCGGTGGTATTTTTTGGCGCCTTCTGGTAGGTACGCTTGTCATGCTAGTCCCCGGTTATATGGGTGAGGCGGGCATGATAAATTCAACAGTTGGTTTCGTAATCGGAATGCTTGGTTGGGCTTACATTCTTTATGAAATCTTTGCTGGTGAAGCGAGTAAAGTTGCGGCTAGTCAAGCGCCTGCGGCAGTCCAAAAATCATATACTCTTATGAAGTGGACGGTCTCTGTC LLTVPLLMIEFYLILAAIATVSGGIFWRLLVGTLVMLVPGYMGEAGMINSTVGFVIGMLGWAYILYEIFAGEASKVAASQAPAAVQKSYTLMKWTVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTAACTGTGCCACTTCTTATGATTGAGTTTTACTTAATCCTTGCGGCG---------ATC---GCTACTGTATCCGGT---GGTATT------------------------------------TTTTGGCGC---CTTCTGGTAGGTACGCTTGTCATGCTAGTCCCCGGTTATATGGGTGAG---------GCG------------------GGC------ATG---------------------------------ATA------------------------------------------------------------------AATTCA------------------ACAGTTGGT---TTCGTAATCGGAATGCTTGGTTGGGCTTACATTCTTTATGAAATC---------------TTT------GCT---GGTGAAGCGAGTAAAGTTGCGGCTAGT------CAA---GCGCCTGCGGCAGTC---CAA---AAA---TCA---TAT---ACT---CTTATG---AAGTGGACGGTCTCTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILAA---I-ATVSG-GI------------FWR-LLVGTLVMLVPGYMGE---A------G--M-----------I----------------------NS------TVG-FVIGMLGWAYILYEI-----F--A-GEASKVAAS--Q-APAAV-Q-K-S-Y-T-LM-KWTVSV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928208 [III-Gamma4-OM60] PRGD_OTU028_162e8a3724fae0308e5179cd2a07bf1a gb|KJ928208| PRGD_OTU028_162e8a3724fae0308e5179cd2a07bf1a, putative proteorhodopsin gene, partial cds. PRGD_OTU028_162e8a3724fae0308e5179cd2a07bf1a, putative proteorhodopsin gene, partial cds. KJ928208 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCCTAACTGTGCCACTTCTTATGATTGAGTTTTACTTAATCCTTGCGGCGATCGCTACTGTATCCGGTGGTATTTTTTGGCGCCTTCTGGTCGGTACGCTTGTCATGCTAGTCCCCGGTTATATGGGCGAGGCGGGCATGATAAATTCAACAGTTGGTTTCGTAATCGGAATGCTTGGTTGGGCTTACATCCTTTATGAAATCTTTGCTGGTGAAGCGAGTAAAGTTGCGGCTAGTCAAGCGCCTGCGGCGGTCCAAAAATCATATACTCTTATGAAGTGGACGGTCTCTGTC LLTVPLLMIEFYLILAAIATVSGGIFWRLLVGTLVMLVPGYMGEAGMINSTVGFVIGMLGWAYILYEIFAGEASKVAASQAPAAVQKSYTLMKWTVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTAACTGTGCCACTTCTTATGATTGAGTTTTACTTAATCCTTGCGGCG---------ATC---GCTACTGTATCCGGT---GGTATT------------------------------------TTTTGGCGC---CTTCTGGTCGGTACGCTTGTCATGCTAGTCCCCGGTTATATGGGCGAG---------GCG------------------GGC------ATG---------------------------------ATA------------------------------------------------------------------AATTCA------------------ACAGTTGGT---TTCGTAATCGGAATGCTTGGTTGGGCTTACATCCTTTATGAAATC---------------TTT------GCT---GGTGAAGCGAGTAAAGTTGCGGCTAGT------CAA---GCGCCTGCGGCGGTC---CAA---AAA---TCA---TAT---ACT---CTTATG---AAGTGGACGGTCTCTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILAA---I-ATVSG-GI------------FWR-LLVGTLVMLVPGYMGE---A------G--M-----------I----------------------NS------TVG-FVIGMLGWAYILYEI-----F--A-GEASKVAAS--Q-APAAV-Q-K-S-Y-T-LM-KWTVSV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928236 [III-Gamma4-OM60] PRGD_OTU028_fc4737e6895dbd3e2728da959bd4cc1d gb|KJ928236| PRGD_OTU028_fc4737e6895dbd3e2728da959bd4cc1d, putative proteorhodopsin gene, partial cds. PRGD_OTU028_fc4737e6895dbd3e2728da959bd4cc1d, putative proteorhodopsin gene, partial cds. KJ928236 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), North Pacific Ocean (50.06, -139.53), English Channel (48.7717, -3.9683) CTGCTTACTGTGCCGTTGCTAATGATTGAGTTCTACTTGATCCTTGCCGCGATCACCAGTGTTTCTGGTGGAATTTTTTGGCGCCTTCTAGTAGGCACCCTTGTAATGCTTATCCCAGGTTACATGGGCGAAGTGGGCATGCTAAATTCAACGGTCGGTTTCGTAATTGGTCTGCTTGGTTGGGCATACATTCTTTATGAAATCTTCGCCGGAGAAGCAAGTAAAGTGGCGGCAAGCCAAGCGCCTGCAGCTGTCCAAAAAGCATATACGCTGATGAAGTGGACGGTCTCGGTC LLTVPLLMIEFYLILAAITSVSGGIFWRLLVGTLVMLIPGYMGEVGMLNSTVGFVIGLLGWAYILYEIFAGEASKVAASQAPAAVQKAYTLMKWTVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTTACTGTGCCGTTGCTAATGATTGAGTTCTACTTGATCCTTGCCGCG---------ATC---ACCAGTGTTTCTGGT---GGAATT------------------------------------TTTTGGCGC---CTTCTAGTAGGCACCCTTGTAATGCTTATCCCAGGTTACATGGGCGAA---------GTG------------------GGC------ATG---------------------------------CTA------------------------------------------------------------------AATTCA------------------ACGGTCGGT---TTCGTAATTGGTCTGCTTGGTTGGGCATACATTCTTTATGAAATC---------------TTC------GCC---GGAGAAGCAAGTAAAGTGGCGGCAAGC------CAA---GCGCCTGCAGCTGTC---CAA---AAA---GCA---TAT---ACG---CTGATG---AAGTGGACGGTCTCGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILAA---I-TSVSG-GI------------FWR-LLVGTLVMLIPGYMGE---V------G--M-----------L----------------------NS------TVG-FVIGLLGWAYILYEI-----F--A-GEASKVAAS--Q-APAAV-Q-K-A-Y-T-LM-KWTVSV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ929798 [III-Gamma4-OM60] PRGD_OTU251_otuREP_b0a9151ccd1eb35d12657905fbdb1b46 gb|KJ929798| PRGD_OTU251_otuREP_b0a9151ccd1eb35d12657905fbdb1b46, putative proteorhodopsin gene, partial cds. PRGD_OTU251_otuREP_b0a9151ccd1eb35d12657905fbdb1b46, putative proteorhodopsin gene, partial cds. KJ929798 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), English Channel (48.7717, -3.9683) CTTCTTACTGTGCCACTACTGATGATTGAGTTCTACTTGATTCTCGCTGCCATCGCAAAAGTACCTGGCGGCGTGTTCTGGCGGCTTCTCATTGGAACCCTTGTTATGCTAATCCCCGGCTTTTTGGGCGAGGCGGGTTACATAAATATTACTGTCGGCTTCGTGATTGGAATGCTGGGTTGGTTGTTTATTCTCTACGAAATATTTGCCGGAAGTGCGAGCAAGATTGCCGCTGAGGAGGCCAGCGAAGCGGTGCAATATTCATACCGGATGATGCGCTGGATAGTGACTATT LLTVPLLMIEFYLILAAIAKVPGGVFWRLLIGTLVMLIPGFLGEAGYINITVGFVIGMLGWLFILYEIFAGSASKIAAEEASEAVQYSYRMMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTTACTGTGCCACTACTGATGATTGAGTTCTACTTGATTCTCGCTGCC---------ATC---GCAAAAGTACCTGGC---GGCGTG------------------------------------TTCTGGCGG---CTTCTCATTGGAACCCTTGTTATGCTAATCCCCGGCTTTTTGGGCGAG---------GCG------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATATT------------------ACTGTCGGC---TTCGTGATTGGAATGCTGGGTTGGTTGTTTATTCTCTACGAAATA---------------TTT------GCC---GGAAGTGCGAGCAAGATTGCCGCTGAG------GAG---GCCAGCGAAGCGGTG---CAA---TAT---TCA---TAC---CGG---ATGATG---CGCTGGATAGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILAA---I-AKVPG-GV------------FWR-LLIGTLVMLIPGFLGE---A------G--Y-----------I----------------------NI------TVG-FVIGMLGWLFILYEI-----F--A-GSASKIAAE--E-ASEAV-Q-Y-S-Y-R-MM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ929799 [III-Gamma4-OM60] PRGD_OTU251_d8c73fd5e4da3e8c44d849f866055fcc gb|KJ929799| PRGD_OTU251_d8c73fd5e4da3e8c44d849f866055fcc, putative proteorhodopsin gene, partial cds. PRGD_OTU251_d8c73fd5e4da3e8c44d849f866055fcc, putative proteorhodopsin gene, partial cds. KJ929799 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) CTTCTTACTGTGCCACTACTGATGATTGAGTTCTACTTGATTCTCGCTGCCATCGCAAAAGTACCTGGCGGCGTGTTCTGGCGTCTTCTCATTGGGACCCTTGTTATGCTAATCCCCGGCTTTTTGGGCGAGGCAGGTTACATAAATATTACCGTCGGCTTCGTGATTGGAATGCTGGGCTGGTTATTTATTCTCTACGAAATATTTGCCGGAAGGGCGAGCAAGATTGCCGCTGAGGAGGCCAGTGAAGCGGTGCAATATTCATACCGGATGATGCGCTGGATAGTGACTGTT LLTVPLLMIEFYLILAAIAKVPGGVFWRLLIGTLVMLIPGFLGEAGYINITVGFVIGMLGWLFILYEIFAGRASKIAAEEASEAVQYSYRMMRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTTACTGTGCCACTACTGATGATTGAGTTCTACTTGATTCTCGCTGCC---------ATC---GCAAAAGTACCTGGC---GGCGTG------------------------------------TTCTGGCGT---CTTCTCATTGGGACCCTTGTTATGCTAATCCCCGGCTTTTTGGGCGAG---------GCA------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATATT------------------ACCGTCGGC---TTCGTGATTGGAATGCTGGGCTGGTTATTTATTCTCTACGAAATA---------------TTT------GCC---GGAAGGGCGAGCAAGATTGCCGCTGAG------GAG---GCCAGTGAAGCGGTG---CAA---TAT---TCA---TAC---CGG---ATGATG---CGCTGGATAGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILAA---I-AKVPG-GV------------FWR-LLIGTLVMLIPGFLGE---A------G--Y-----------I----------------------NI------TVG-FVIGMLGWLFILYEI-----F--A-GRASKIAAE--E-ASEAV-Q-Y-S-Y-R-MM-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928213 [III-Gamma4-OM60] PRGD_OTU028_47543b995c012097bef481e89072c3a2 gb|KJ928213| PRGD_OTU028_47543b995c012097bef481e89072c3a2, putative proteorhodopsin gene, partial cds. PRGD_OTU028_47543b995c012097bef481e89072c3a2, putative proteorhodopsin gene, partial cds. KJ928213 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175) CTCTTAACTGTTCCGCTGCTAATGATCGAGTTCTACCTGATCTTGTCAGCCATCACCAAAGTTGCGGGTGGGGTCTTCTGGAGGCTTCTTATCGGCACCCTGGTAATGTTAGTGCCGGGATACATGGGCGAGGCCGGCTACATGAACGCGACCCTCGGGTTCGTGATTGGCATACTCGGTTGGGCGTTCATTCTCTACGAAATTTTCGCGGGTGAAGCAAGTAAAGTCGCTGCCAGTCAGGCGCCTGCGGCGGTGCAGAAGTCTTATAACCTTATGAAGTGGACTGTCACTATT LLTVPLLMIEFYLILSAITKVAGGVFWRLLIGTLVMLVPGYMGEAGYMNATLGFVIGILGWAFILYEIFAGEASKVAASQAPAAVQKSYNLMKWTVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACTGTTCCGCTGCTAATGATCGAGTTCTACCTGATCTTGTCAGCC---------ATC---ACCAAAGTTGCGGGT---GGGGTC------------------------------------TTCTGGAGG---CTTCTTATCGGCACCCTGGTAATGTTAGTGCCGGGATACATGGGCGAG---------GCC------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AACGCG------------------ACCCTCGGG---TTCGTGATTGGCATACTCGGTTGGGCGTTCATTCTCTACGAAATT---------------TTC------GCG---GGTGAAGCAAGTAAAGTCGCTGCCAGT------CAG---GCGCCTGCGGCGGTG---CAG---AAG---TCT---TAT---AAC---CTTATG---AAGTGGACTGTCACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILSA---I-TKVAG-GV------------FWR-LLIGTLVMLVPGYMGE---A------G--Y-----------M----------------------NA------TLG-FVIGILGWAFILYEI-----F--A-GEASKVAAS--Q-APAAV-Q-K-S-Y-N-LM-KWTVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928215 [III-Gamma4-OM60] PRGD_OTU028_519c63ca0f63d082816b1a4107def863 gb|KJ928215| PRGD_OTU028_519c63ca0f63d082816b1a4107def863, putative proteorhodopsin gene, partial cds. PRGD_OTU028_519c63ca0f63d082816b1a4107def863, putative proteorhodopsin gene, partial cds. KJ928215 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (73.9992, 19.2097), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTTTTAACTGTTCCGCTGCTAATGATCGAGTTCTACCTGATCTTGTCAGCCATCACCAAAGTTGCGGGTGGGGTCTTCTGGAGGCTTCTTATTGGCACCCTGGTAATGTTAGTGCCGGGATACATGGGCGAGGCCGGCTACATGAACGCGACCTACGGTTTCGTGATTGGCATGCTCGGTTGGGCCTTCATTCTTTACGAAATTTTCGCGGGTGAAGCAAGTAAAGTCGCTGCCAGTCAGGCGCCTGCGGCGGTGCAGAAGTCTTACAACCTTATGAAGTGGACTGTCACTATT LLTVPLLMIEFYLILSAITKVAGGVFWRLLIGTLVMLVPGYMGEAGYMNATYGFVIGMLGWAFILYEIFAGEASKVAASQAPAAVQKSYNLMKWTVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTAACTGTTCCGCTGCTAATGATCGAGTTCTACCTGATCTTGTCAGCC---------ATC---ACCAAAGTTGCGGGT---GGGGTC------------------------------------TTCTGGAGG---CTTCTTATTGGCACCCTGGTAATGTTAGTGCCGGGATACATGGGCGAG---------GCC------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AACGCG------------------ACCTACGGT---TTCGTGATTGGCATGCTCGGTTGGGCCTTCATTCTTTACGAAATT---------------TTC------GCG---GGTGAAGCAAGTAAAGTCGCTGCCAGT------CAG---GCGCCTGCGGCGGTG---CAG---AAG---TCT---TAC---AAC---CTTATG---AAGTGGACTGTCACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILSA---I-TKVAG-GV------------FWR-LLIGTLVMLVPGYMGE---A------G--Y-----------M----------------------NA------TYG-FVIGMLGWAFILYEI-----F--A-GEASKVAAS--Q-APAAV-Q-K-S-Y-N-LM-KWTVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928211 [III-Gamma4-OM60] PRGD_OTU028_3179eb3ebaef0d1c2c1d537092b16fc7 gb|KJ928211| PRGD_OTU028_3179eb3ebaef0d1c2c1d537092b16fc7, putative proteorhodopsin gene, partial cds. PRGD_OTU028_3179eb3ebaef0d1c2c1d537092b16fc7, putative proteorhodopsin gene, partial cds. KJ928211 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683) CTTTTAACTGTCCCGCTGCTAATGATCGAGTTCTACTTGATCTTGTCAGCCATCACCAAAGTTGCGGGTGGGGTCTTCTGGAGGCTTCTTATCGGCACCCTGGTAATGTTAGTGCCGGGATACATGGGCGAGGCCGGCTACTTGAACGCGACTATCGGGTTCGCGATTGGCATGCTCGGTTGGGCGTTCATTCTCTACGAAATTTTCGCGGGTGAAGCAAGTAAAGTCGCTGCCAGTCAGGCGCCTGCGGCGGTGCAGAAGTCTTATAACCTTATGAAGTGGACTGTCACTATT LLTVPLLMIEFYLILSAITKVAGGVFWRLLIGTLVMLVPGYMGEAGYLNATIGFAIGMLGWAFILYEIFAGEASKVAASQAPAAVQKSYNLMKWTVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTAACTGTCCCGCTGCTAATGATCGAGTTCTACTTGATCTTGTCAGCC---------ATC---ACCAAAGTTGCGGGT---GGGGTC------------------------------------TTCTGGAGG---CTTCTTATCGGCACCCTGGTAATGTTAGTGCCGGGATACATGGGCGAG---------GCC------------------GGC------TAC---------------------------------TTG------------------------------------------------------------------AACGCG------------------ACTATCGGG---TTCGCGATTGGCATGCTCGGTTGGGCGTTCATTCTCTACGAAATT---------------TTC------GCG---GGTGAAGCAAGTAAAGTCGCTGCCAGT------CAG---GCGCCTGCGGCGGTG---CAG---AAG---TCT---TAT---AAC---CTTATG---AAGTGGACTGTCACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILSA---I-TKVAG-GV------------FWR-LLIGTLVMLVPGYMGE---A------G--Y-----------L----------------------NA------TIG-FAIGMLGWAFILYEI-----F--A-GEASKVAAS--Q-APAAV-Q-K-S-Y-N-LM-KWTVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928229 [III-Gamma4-OM60] PRGD_OTU028_d263c2a5928c358af31e77a97b0f0294 gb|KJ928229| PRGD_OTU028_d263c2a5928c358af31e77a97b0f0294, putative proteorhodopsin gene, partial cds. PRGD_OTU028_d263c2a5928c358af31e77a97b0f0294, putative proteorhodopsin gene, partial cds. KJ928229 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTTTAACTGTCCCGCTGCTAATGATCGAGTTCTACCTGATCTTGTCAGCCATCACTAAAGTTGCGGGTGGGGTGTTCTGGAGGCTTCTCATCGGCACCTTGGTAATGTTAGTACCAGGATACATGGGTGAGGCCGGCTACATGAACGCGACCCTCGGGTTCGTGATTGGCATGCTCGGTTGGGCATTCATTCTCTACGAAATTTTCGCGGGTGAAGCAAGTAAAGTCGCTGCCAGTCAGGCGCCTGCGGCGGTGCAAAAGTCTTATAACCTTATGAAGTGGACTGTCACTATT LLTVPLLMIEFYLILSAITKVAGGVFWRLLIGTLVMLVPGYMGEAGYMNATLGFVIGMLGWAFILYEIFAGEASKVAASQAPAAVQKSYNLMKWTVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTAACTGTCCCGCTGCTAATGATCGAGTTCTACCTGATCTTGTCAGCC---------ATC---ACTAAAGTTGCGGGT---GGGGTG------------------------------------TTCTGGAGG---CTTCTCATCGGCACCTTGGTAATGTTAGTACCAGGATACATGGGTGAG---------GCC------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AACGCG------------------ACCCTCGGG---TTCGTGATTGGCATGCTCGGTTGGGCATTCATTCTCTACGAAATT---------------TTC------GCG---GGTGAAGCAAGTAAAGTCGCTGCCAGT------CAG---GCGCCTGCGGCGGTG---CAA---AAG---TCT---TAT---AAC---CTTATG---AAGTGGACTGTCACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILSA---I-TKVAG-GV------------FWR-LLIGTLVMLVPGYMGE---A------G--Y-----------M----------------------NA------TLG-FVIGMLGWAFILYEI-----F--A-GEASKVAAS--Q-APAAV-Q-K-S-Y-N-LM-KWTVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928210 [III-Gamma4-OM60] PRGD_OTU028_2fa6a4ccfedc40f1b62f665ec09dd874 gb|KJ928210| PRGD_OTU028_2fa6a4ccfedc40f1b62f665ec09dd874, putative proteorhodopsin gene, partial cds. PRGD_OTU028_2fa6a4ccfedc40f1b62f665ec09dd874, putative proteorhodopsin gene, partial cds. KJ928210 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) CTTTTAACTGTTCCGCTGCTAATGATCGAGTTCTACCTGATCCTGTCAGCCATCACCAAGGTTGCAGGTGGGGTCTTCTGGAGGCTTCTTATCGGCACCCTGGTAATGTTAGTGCCGGGATACATGGGCGAGGCCGGCTACATGAATGCGACCCTCGGGTTCGTGATCGGCATGCTCGGCTGGGCGTTCATTCTCTACGAAATTTTCGCGGGTGAAGCAAGTAAAGTCGCTGCCAGTCAGGCGCCTGCGGCGGTGCAGAAGTCTTATAACCTTATGAAGTGGACTGTCACTATT LLTVPLLMIEFYLILSAITKVAGGVFWRLLIGTLVMLVPGYMGEAGYMNATLGFVIGMLGWAFILYEIFAGEASKVAASQAPAAVQKSYNLMKWTVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTAACTGTTCCGCTGCTAATGATCGAGTTCTACCTGATCCTGTCAGCC---------ATC---ACCAAGGTTGCAGGT---GGGGTC------------------------------------TTCTGGAGG---CTTCTTATCGGCACCCTGGTAATGTTAGTGCCGGGATACATGGGCGAG---------GCC------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AATGCG------------------ACCCTCGGG---TTCGTGATCGGCATGCTCGGCTGGGCGTTCATTCTCTACGAAATT---------------TTC------GCG---GGTGAAGCAAGTAAAGTCGCTGCCAGT------CAG---GCGCCTGCGGCGGTG---CAG---AAG---TCT---TAT---AAC---CTTATG---AAGTGGACTGTCACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILSA---I-TKVAG-GV------------FWR-LLIGTLVMLVPGYMGE---A------G--Y-----------M----------------------NA------TLG-FVIGMLGWAFILYEI-----F--A-GEASKVAAS--Q-APAAV-Q-K-S-Y-N-LM-KWTVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928216 [III-Gamma4-OM60] PRGD_OTU028_658a7beef099751166a6cd6d9dabd50d gb|KJ928216| PRGD_OTU028_658a7beef099751166a6cd6d9dabd50d, putative proteorhodopsin gene, partial cds. PRGD_OTU028_658a7beef099751166a6cd6d9dabd50d, putative proteorhodopsin gene, partial cds. KJ928216 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73) CTTTTGACTGTTCCGCTGCTAATGATCGAGTTCTACCTGATCTTATCAGCCATCACCAAAGTTGCGGGCGGGGTCTTCTGGAGGCTTCTTATCGGCACACTGGTAATGTTAGTGCCGGGATACATGGGTGAAGCCGGCTACATGAACGCAACCTTCGGGTTCGTAATTGGCATGCTGGGTTGGGCATTTATTCTTTACGAAATTTTCGCGGGTGAAGCAAGTAAAGTCGCTGCCAGTCAGGCGCCAGCAGCGGTTCAGAAGTCTTACAACCTGATGAAGTGGACTGTCACTATC LLTVPLLMIEFYLILSAITKVAGGVFWRLLIGTLVMLVPGYMGEAGYMNATFGFVIGMLGWAFILYEIFAGEASKVAASQAPAAVQKSYNLMKWTVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTGACTGTTCCGCTGCTAATGATCGAGTTCTACCTGATCTTATCAGCC---------ATC---ACCAAAGTTGCGGGC---GGGGTC------------------------------------TTCTGGAGG---CTTCTTATCGGCACACTGGTAATGTTAGTGCCGGGATACATGGGTGAA---------GCC------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AACGCA------------------ACCTTCGGG---TTCGTAATTGGCATGCTGGGTTGGGCATTTATTCTTTACGAAATT---------------TTC------GCG---GGTGAAGCAAGTAAAGTCGCTGCCAGT------CAG---GCGCCAGCAGCGGTT---CAG---AAG---TCT---TAC---AAC---CTGATG---AAGTGGACTGTCACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILSA---I-TKVAG-GV------------FWR-LLIGTLVMLVPGYMGE---A------G--Y-----------M----------------------NA------TFG-FVIGMLGWAFILYEI-----F--A-GEASKVAAS--Q-APAAV-Q-K-S-Y-N-LM-KWTVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928220 [III-Gamma4-OM60] PRGD_OTU028_872ff8a3deca3816bb95e68860afd190 gb|KJ928220| PRGD_OTU028_872ff8a3deca3816bb95e68860afd190, putative proteorhodopsin gene, partial cds. PRGD_OTU028_872ff8a3deca3816bb95e68860afd190, putative proteorhodopsin gene, partial cds. KJ928220 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTTTGACTGTTCCGCTGCTAATGATCGAGTTCTACCTGATCTTGTCAGCCATCACCAAAGTTGCGGGCGGGGTCTTCTGGAGGCTTCTTATCGGCACACTGGTAATGTTAGTGCCGGGATACATGGGTGAAGCCGGCTACATGAACGCAACCTTCGGTTTCGTAATTGGCATGCTGGGTTGGGCATTTATTCTTTACGAAATTTTCGCGGGTGAAGCAAGTAAAGTCGCTGCCAGTCAGGCGCCAGCAGCGGTTCAGAAGTCTTATAACCTGATGAAGTGGACTGTCACTATT LLTVPLLMIEFYLILSAITKVAGGVFWRLLIGTLVMLVPGYMGEAGYMNATFGFVIGMLGWAFILYEIFAGEASKVAASQAPAAVQKSYNLMKWTVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTGACTGTTCCGCTGCTAATGATCGAGTTCTACCTGATCTTGTCAGCC---------ATC---ACCAAAGTTGCGGGC---GGGGTC------------------------------------TTCTGGAGG---CTTCTTATCGGCACACTGGTAATGTTAGTGCCGGGATACATGGGTGAA---------GCC------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AACGCA------------------ACCTTCGGT---TTCGTAATTGGCATGCTGGGTTGGGCATTTATTCTTTACGAAATT---------------TTC------GCG---GGTGAAGCAAGTAAAGTCGCTGCCAGT------CAG---GCGCCAGCAGCGGTT---CAG---AAG---TCT---TAT---AAC---CTGATG---AAGTGGACTGTCACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILSA---I-TKVAG-GV------------FWR-LLIGTLVMLVPGYMGE---A------G--Y-----------M----------------------NA------TFG-FVIGMLGWAFILYEI-----F--A-GEASKVAAS--Q-APAAV-Q-K-S-Y-N-LM-KWTVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928221 [III-Gamma4-OM60] PRGD_OTU028_8f20bd8830b698ccfea2f7440d2b6619 gb|KJ928221| PRGD_OTU028_8f20bd8830b698ccfea2f7440d2b6619, putative proteorhodopsin gene, partial cds. PRGD_OTU028_8f20bd8830b698ccfea2f7440d2b6619, putative proteorhodopsin gene, partial cds. KJ928221 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTTTGACTGTTCCGCTGTTAATGATCGAGTTCTACCTGATCTTGTCAGCCATCACCAAAGTTGCGGGCGGGGTCTTCTGGAGGCTTCTTGTCGGCACACTGGTAATGTTAGTGCCGGGATACATGGGCGAAGCCGGCTACATGAATGCAACCTTCGGGTTCGTAATTGGCATGCTGGGTTGGGCGTTTATTCTTTATGAAATTTTCGCGGGTGAAGCAAGTAGAGTCGCTGCCAGTCAGGCGCCAGCAGCGGTGCAAAAGTCTTATAACCTGATGAAGTGGACTGTGACTATA LLTVPLLMIEFYLILSAITKVAGGVFWRLLVGTLVMLVPGYMGEAGYMNATFGFVIGMLGWAFILYEIFAGEASRVAASQAPAAVQKSYNLMKWTVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTGACTGTTCCGCTGTTAATGATCGAGTTCTACCTGATCTTGTCAGCC---------ATC---ACCAAAGTTGCGGGC---GGGGTC------------------------------------TTCTGGAGG---CTTCTTGTCGGCACACTGGTAATGTTAGTGCCGGGATACATGGGCGAA---------GCC------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AATGCA------------------ACCTTCGGG---TTCGTAATTGGCATGCTGGGTTGGGCGTTTATTCTTTATGAAATT---------------TTC------GCG---GGTGAAGCAAGTAGAGTCGCTGCCAGT------CAG---GCGCCAGCAGCGGTG---CAA---AAG---TCT---TAT---AAC---CTGATG---AAGTGGACTGTGACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILSA---I-TKVAG-GV------------FWR-LLVGTLVMLVPGYMGE---A------G--Y-----------M----------------------NA------TFG-FVIGMLGWAFILYEI-----F--A-GEASRVAAS--Q-APAAV-Q-K-S-Y-N-LM-KWTVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928223 [III-Gamma4-OM60] PRGD_OTU028_acb3be8934de8ff2f0921980fae28aba gb|KJ928223| PRGD_OTU028_acb3be8934de8ff2f0921980fae28aba, putative proteorhodopsin gene, partial cds. PRGD_OTU028_acb3be8934de8ff2f0921980fae28aba, putative proteorhodopsin gene, partial cds. KJ928223 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTTTTAACTGTACCGCTGCTAATGATTGAGTTCTACCTGATCTTGTCAGCCATCACCAAAGTTGCAGGTGGGGTCTTCTGGAGGCTTCTTATCGGCACACTGGTAATGCTAGTGCCGGGATACATGGGCGAAGCCGGCTACATGAATGCAACCCTCGGATTCGTGATTGGCATGCTCGGTTGGGCGTTCATTCTGTACGAAATTTTCGCGGGTGAAGCGAGCAAAGTCGCTGCCAGTCAGGCGCCTGCGGCGGTGCAGAAGTCGTACAATCTGATGAAGTGGACTGTCACTATT LLTVPLLMIEFYLILSAITKVAGGVFWRLLIGTLVMLVPGYMGEAGYMNATLGFVIGMLGWAFILYEIFAGEASKVAASQAPAAVQKSYNLMKWTVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTAACTGTACCGCTGCTAATGATTGAGTTCTACCTGATCTTGTCAGCC---------ATC---ACCAAAGTTGCAGGT---GGGGTC------------------------------------TTCTGGAGG---CTTCTTATCGGCACACTGGTAATGCTAGTGCCGGGATACATGGGCGAA---------GCC------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AATGCA------------------ACCCTCGGA---TTCGTGATTGGCATGCTCGGTTGGGCGTTCATTCTGTACGAAATT---------------TTC------GCG---GGTGAAGCGAGCAAAGTCGCTGCCAGT------CAG---GCGCCTGCGGCGGTG---CAG---AAG---TCG---TAC---AAT---CTGATG---AAGTGGACTGTCACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILSA---I-TKVAG-GV------------FWR-LLIGTLVMLVPGYMGE---A------G--Y-----------M----------------------NA------TLG-FVIGMLGWAFILYEI-----F--A-GEASKVAAS--Q-APAAV-Q-K-S-Y-N-LM-KWTVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928218 [III-Gamma4-OM60] PRGD_OTU028_6fcc1f3644640d3c0913d7e44772b216 gb|KJ928218| PRGD_OTU028_6fcc1f3644640d3c0913d7e44772b216, putative proteorhodopsin gene, partial cds. PRGD_OTU028_6fcc1f3644640d3c0913d7e44772b216, putative proteorhodopsin gene, partial cds. KJ928218 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) TTGCTGACTGTGCCCCTGCTAATGATAGAGTTCTATCTCATACTCTCTGCCATCACAAAGGTGGCTGGTGGAGTGTTCTGGCGTCTACTGATTGGCACGCTGGTTATGCTGATCCCCGGATACATGGGCGAAGCGGGCTACATGAACGCGACACTCGGCTTTGCAATAGGCATGTTAGGGTGGGCCTTCATTCTCTATGAAATTTTTGCCGGCGAAGCGAGCCGGGTCGCGGCCAGCGCAGCTCCGCCTGCTGTTCAGAAATCTTACAATCTGATGAAGTGGACTGTTACGATC LLTVPLLMIEFYLILSAITKVAGGVFWRLLIGTLVMLIPGYMGEAGYMNATLGFAIGMLGWAFILYEIFAGEASRVAASAAPPAVQKSYNLMKWTVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTGACTGTGCCCCTGCTAATGATAGAGTTCTATCTCATACTCTCTGCC---------ATC---ACAAAGGTGGCTGGT---GGAGTG------------------------------------TTCTGGCGT---CTACTGATTGGCACGCTGGTTATGCTGATCCCCGGATACATGGGCGAA---------GCG------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AACGCG------------------ACACTCGGC---TTTGCAATAGGCATGTTAGGGTGGGCCTTCATTCTCTATGAAATT---------------TTT------GCC---GGCGAAGCGAGCCGGGTCGCGGCCAGC------GCA---GCTCCGCCTGCTGTT---CAG---AAA---TCT---TAC---AAT---CTGATG---AAGTGGACTGTTACGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILSA---I-TKVAG-GV------------FWR-LLIGTLVMLIPGYMGE---A------G--Y-----------M----------------------NA------TLG-FAIGMLGWAFILYEI-----F--A-GEASRVAAS--A-APPAV-Q-K-S-Y-N-LM-KWTVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928235 [III-Gamma4-OM60] PRGD_OTU028_f85ab62b6b34d476929593bda3eb2132 gb|KJ928235| PRGD_OTU028_f85ab62b6b34d476929593bda3eb2132, putative proteorhodopsin gene, partial cds. PRGD_OTU028_f85ab62b6b34d476929593bda3eb2132, putative proteorhodopsin gene, partial cds. KJ928235 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGCTGACTGTGCCCCTTCTAATGATAGAGTTCTATCTCATACTCTCTGCTATTACAAAGGTAGCTGGCGGAGTGTTCTGGCGTCTGCTGATTGGCACGCTGGTTATGCTGATCCCCGGATACATGGGCGAAGCGGGCTACATGAACGCGACACTCGGCTTCGCAATAGGCATGTTGGGGTGGGCCTTCATTCTCTATGAGATCTTTGCCGGCGAAGCGAGCCGGGTCGCGGCCAGCGCAGCTCCGCCTGCTGTTCAGAAATCTTACAATCTGATGAAGTGGACTGTTACGATC LLTVPLLMIEFYLILSAITKVAGGVFWRLLIGTLVMLIPGYMGEAGYMNATLGFAIGMLGWAFILYEIFAGEASRVAASAAPPAVQKSYNLMKWTVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTGACTGTGCCCCTTCTAATGATAGAGTTCTATCTCATACTCTCTGCT---------ATT---ACAAAGGTAGCTGGC---GGAGTG------------------------------------TTCTGGCGT---CTGCTGATTGGCACGCTGGTTATGCTGATCCCCGGATACATGGGCGAA---------GCG------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AACGCG------------------ACACTCGGC---TTCGCAATAGGCATGTTGGGGTGGGCCTTCATTCTCTATGAGATC---------------TTT------GCC---GGCGAAGCGAGCCGGGTCGCGGCCAGC------GCA---GCTCCGCCTGCTGTT---CAG---AAA---TCT---TAC---AAT---CTGATG---AAGTGGACTGTTACGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILSA---I-TKVAG-GV------------FWR-LLIGTLVMLIPGYMGE---A------G--Y-----------M----------------------NA------TLG-FAIGMLGWAFILYEI-----F--A-GEASRVAAS--A-APPAV-Q-K-S-Y-N-LM-KWTVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928233 [III-Gamma4-OM60] PRGD_OTU028_e6a9e725ea3596f632491d8db2f7b824 gb|KJ928233| PRGD_OTU028_e6a9e725ea3596f632491d8db2f7b824, putative proteorhodopsin gene, partial cds. PRGD_OTU028_e6a9e725ea3596f632491d8db2f7b824, putative proteorhodopsin gene, partial cds. KJ928233 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) CTTCTGACTGTGCCGCTGCTGATGATTGAGTTCTACCTCATTCTGTCAGCTATCACAAAAGTCTCTGGTGGTGTGTTTTGGCGCCTGCTGATTGGTACTTTAGTCATGCTGATACCTGGATACATGGGTGAGGCTGGCTACTTAAACGCTACCGTCGGTTTTGTCATCGGCATGATCGGATGGGCTTATATCCTTTACGAGATCTTTGCTGGCGAAGCGAGCCAAGTTGCTGCAAACCAAGCAACCGCGGCTGTGCAAAAGTCATACGGACTCATGAAGTGGACGGTAACAATT LLTVPLLMIEFYLILSAITKVSGGVFWRLLIGTLVMLIPGYMGEAGYLNATVGFVIGMIGWAYILYEIFAGEASQVAANQATAAVQKSYGLMKWTVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTGACTGTGCCGCTGCTGATGATTGAGTTCTACCTCATTCTGTCAGCT---------ATC---ACAAAAGTCTCTGGT---GGTGTG------------------------------------TTTTGGCGC---CTGCTGATTGGTACTTTAGTCATGCTGATACCTGGATACATGGGTGAG---------GCT------------------GGC------TAC---------------------------------TTA------------------------------------------------------------------AACGCT------------------ACCGTCGGT---TTTGTCATCGGCATGATCGGATGGGCTTATATCCTTTACGAGATC---------------TTT------GCT---GGCGAAGCGAGCCAAGTTGCTGCAAAC------CAA---GCAACCGCGGCTGTG---CAA---AAG---TCA---TAC---GGA---CTCATG---AAGTGGACGGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILSA---I-TKVSG-GV------------FWR-LLIGTLVMLIPGYMGE---A------G--Y-----------L----------------------NA------TVG-FVIGMIGWAYILYEI-----F--A-GEASQVAAN--Q-ATAAV-Q-K-S-Y-G-LM-KWTVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928234 [III-Gamma4-OM60] PRGD_OTU028_f19e99bfcd1a8074dc63009301cfe2c3 gb|KJ928234| PRGD_OTU028_f19e99bfcd1a8074dc63009301cfe2c3, putative proteorhodopsin gene, partial cds. PRGD_OTU028_f19e99bfcd1a8074dc63009301cfe2c3, putative proteorhodopsin gene, partial cds. KJ928234 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) CTTCTCACCGTGCCACTGCTGATGATCGAGTTCTATCTAATTCTTGCAGCGATCACTGCGGTTTCAGGCGGCATCTTCTGGCGTCTGTTGATTGGTACGCTAGTGATGTTGATCCCAGGCTACATGGGCGAAGCGGGCTATCTCAATGCTACCGTCGGATTCGTCATAGGTATGATCGGTTGGGCCTACATCCTATATGAAATCTTCGCTGGTGAAGCAAGCAAAGTTGCGGCTGGACAAGCACCTGCGGCAGTGCAAAAGGCCTACGGCTTAATGAAATGGACAGTGACAATC LLTVPLLMIEFYLILAAITAVSGGIFWRLLIGTLVMLIPGYMGEAGYLNATVGFVIGMIGWAYILYEIFAGEASKVAAGQAPAAVQKAYGLMKWTVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTCACCGTGCCACTGCTGATGATCGAGTTCTATCTAATTCTTGCAGCG---------ATC---ACTGCGGTTTCAGGC---GGCATC------------------------------------TTCTGGCGT---CTGTTGATTGGTACGCTAGTGATGTTGATCCCAGGCTACATGGGCGAA---------GCG------------------GGC------TAT---------------------------------CTC------------------------------------------------------------------AATGCT------------------ACCGTCGGA---TTCGTCATAGGTATGATCGGTTGGGCCTACATCCTATATGAAATC---------------TTC------GCT---GGTGAAGCAAGCAAAGTTGCGGCTGGA------CAA---GCACCTGCGGCAGTG---CAA---AAG---GCC---TAC---GGC---TTAATG---AAATGGACAGTGACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILAA---I-TAVSG-GI------------FWR-LLIGTLVMLIPGYMGE---A------G--Y-----------L----------------------NA------TVG-FVIGMIGWAYILYEI-----F--A-GEASKVAAG--Q-APAAV-Q-K-A-Y-G-LM-KWTVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928212 [III-Gamma4-OM60] PRGD_OTU028_4320aa195dbf258624bfa4e4bc1f0f44 gb|KJ928212| PRGD_OTU028_4320aa195dbf258624bfa4e4bc1f0f44, putative proteorhodopsin gene, partial cds. PRGD_OTU028_4320aa195dbf258624bfa4e4bc1f0f44, putative proteorhodopsin gene, partial cds. KJ928212 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTTCTCACCGTGCCACTGCTGATGATCGAGTTCTATCTAATTCTTGCAGCGATCACTGCGGTTTCAGGCGGCATCTTCTGGCGTCTGTTGATTGGTACGCTAGTGATGTTGATCCCAGGCTACATGGGCGAAGCGGGCTATCTCAATGCTACCGTCGGATTCGTCATAGGTATGATCGGTTGGGCCTACATCCTGTATGAAATCTTCGCTGGTGAAGCAAGCAAAGTTGCGGCTGGACAAGCACCTGCGGCAGTACAAAAGGCCTACGGCTTAATGAAATGGACAGTGACAATC LLTVPLLMIEFYLILAAITAVSGGIFWRLLIGTLVMLIPGYMGEAGYLNATVGFVIGMIGWAYILYEIFAGEASKVAAGQAPAAVQKAYGLMKWTVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTCACCGTGCCACTGCTGATGATCGAGTTCTATCTAATTCTTGCAGCG---------ATC---ACTGCGGTTTCAGGC---GGCATC------------------------------------TTCTGGCGT---CTGTTGATTGGTACGCTAGTGATGTTGATCCCAGGCTACATGGGCGAA---------GCG------------------GGC------TAT---------------------------------CTC------------------------------------------------------------------AATGCT------------------ACCGTCGGA---TTCGTCATAGGTATGATCGGTTGGGCCTACATCCTGTATGAAATC---------------TTC------GCT---GGTGAAGCAAGCAAAGTTGCGGCTGGA------CAA---GCACCTGCGGCAGTA---CAA---AAG---GCC---TAC---GGC---TTAATG---AAATGGACAGTGACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILAA---I-TAVSG-GI------------FWR-LLIGTLVMLIPGYMGE---A------G--Y-----------L----------------------NA------TVG-FVIGMIGWAYILYEI-----F--A-GEASKVAAG--Q-APAAV-Q-K-A-Y-G-LM-KWTVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928227 [III-Gamma4-OM60] PRGD_OTU028_ce96f44aa3e0b0ddb2ce1a4da0775087 gb|KJ928227| PRGD_OTU028_ce96f44aa3e0b0ddb2ce1a4da0775087, putative proteorhodopsin gene, partial cds. PRGD_OTU028_ce96f44aa3e0b0ddb2ce1a4da0775087, putative proteorhodopsin gene, partial cds. KJ928227 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGCTGACTGTACCGCTTCTGATGATAGAGTTTTATCTCATACTGGCTGCTATCACAAAGGTTTCAGGCGGCATTTTCTGGCGATTGCTGATTGGAACGCTGGTCATGCTGATCCCAGGCTACATGGGGGAAGCTGGCTACCTCAACGCCACCGTAGGATTCGCCATTGGCATGGTCGGCTGGTTCTTCATCCTGTATGAAATCTTCTTTGGCGAGGCAAGTAAGGTCGCTGCAACACAAGCACCACCAGCGGTGCAAATGTCTTACACGCTCATGAAATGGACGGTCACGGTG LLTVPLLMIEFYLILAAITKVSGGIFWRLLIGTLVMLIPGYMGEAGYLNATVGFAIGMVGWFFILYEIFFGEASKVAATQAPPAVQMSYTLMKWTVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTGACTGTACCGCTTCTGATGATAGAGTTTTATCTCATACTGGCTGCT---------ATC---ACAAAGGTTTCAGGC---GGCATT------------------------------------TTCTGGCGA---TTGCTGATTGGAACGCTGGTCATGCTGATCCCAGGCTACATGGGGGAA---------GCT------------------GGC------TAC---------------------------------CTC------------------------------------------------------------------AACGCC------------------ACCGTAGGA---TTCGCCATTGGCATGGTCGGCTGGTTCTTCATCCTGTATGAAATC---------------TTC------TTT---GGCGAGGCAAGTAAGGTCGCTGCAACA------CAA---GCACCACCAGCGGTG---CAA---ATG---TCT---TAC---ACG---CTCATG---AAATGGACGGTCACGGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILAA---I-TKVSG-GI------------FWR-LLIGTLVMLIPGYMGE---A------G--Y-----------L----------------------NA------TVG-FAIGMVGWFFILYEI-----F--F-GEASKVAAT--Q-APPAV-Q-M-S-Y-T-LM-KWTVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928231 [III-Gamma4-OM60] PRGD_OTU028_dc319195e22a247f5937b24db7e7f1d1 gb|KJ928231| PRGD_OTU028_dc319195e22a247f5937b24db7e7f1d1, putative proteorhodopsin gene, partial cds. PRGD_OTU028_dc319195e22a247f5937b24db7e7f1d1, putative proteorhodopsin gene, partial cds. KJ928231 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Indian Ocean (-33.28, 45.35) CTGCTGACTGTACCGCTTCTGATGATAGAGTTTTATCTCATACTGGCTGCTATCACAAAGGTTTCAGGCGGCATTTTCTGGCGATTGCTGATTGGAACGCTGGTCATGCTGATCCCAGGCTACATGGGGGAAGCTGGCTACCTCAACGCCACCGTAGGATTCGCCATTGGCATGGTCGGCTGGTTCTTCATCCTGTATGAAATCTTCTTTGGCGAGGCAAGTAAGGTTGCTGCAACACAAGCACCACCAGCGGTGCAAATGTCTTACACGCTCATGAAATGGACGGTAACGGTG LLTVPLLMIEFYLILAAITKVSGGIFWRLLIGTLVMLIPGYMGEAGYLNATVGFAIGMVGWFFILYEIFFGEASKVAATQAPPAVQMSYTLMKWTVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTGACTGTACCGCTTCTGATGATAGAGTTTTATCTCATACTGGCTGCT---------ATC---ACAAAGGTTTCAGGC---GGCATT------------------------------------TTCTGGCGA---TTGCTGATTGGAACGCTGGTCATGCTGATCCCAGGCTACATGGGGGAA---------GCT------------------GGC------TAC---------------------------------CTC------------------------------------------------------------------AACGCC------------------ACCGTAGGA---TTCGCCATTGGCATGGTCGGCTGGTTCTTCATCCTGTATGAAATC---------------TTC------TTT---GGCGAGGCAAGTAAGGTTGCTGCAACA------CAA---GCACCACCAGCGGTG---CAA---ATG---TCT---TAC---ACG---CTCATG---AAATGGACGGTAACGGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILAA---I-TKVSG-GI------------FWR-LLIGTLVMLIPGYMGE---A------G--Y-----------L----------------------NA------TVG-FAIGMVGWFFILYEI-----F--F-GEASKVAAT--Q-APPAV-Q-M-S-Y-T-LM-KWTVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928207 [III-Gamma4-OM60] PRGD_OTU028_05fd071b5ccc07530cab011b5defb10d gb|KJ928207| PRGD_OTU028_05fd071b5ccc07530cab011b5defb10d, putative proteorhodopsin gene, partial cds. PRGD_OTU028_05fd071b5ccc07530cab011b5defb10d, putative proteorhodopsin gene, partial cds. KJ928207 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGCTGACCGTACCGCTCCTGATGATAGAGTTTTATCTCATACTGGCTGCTATCACAAAAGTATCAGGCGGCATTTTCTGGCGCTTGCTGATTGGAACGCTGGTCATGCTGGTTCCAGGCTACATGGGGGAAGCTGGCTACCTCAACGCTACCGTAGGATTCGCCATTGGCATGGTCGGCTGGTTCTACATCCTGTATGAAATCTTCTTTGGCGAGGCAAGTAAGGTCGCTGCAACACAGGCACCACCAGCGGTGCAAATGTCTTACACGCTCATGAAATGGACGGTAACGGTG LLTVPLLMIEFYLILAAITKVSGGIFWRLLIGTLVMLVPGYMGEAGYLNATVGFAIGMVGWFYILYEIFFGEASKVAATQAPPAVQMSYTLMKWTVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTGACCGTACCGCTCCTGATGATAGAGTTTTATCTCATACTGGCTGCT---------ATC---ACAAAAGTATCAGGC---GGCATT------------------------------------TTCTGGCGC---TTGCTGATTGGAACGCTGGTCATGCTGGTTCCAGGCTACATGGGGGAA---------GCT------------------GGC------TAC---------------------------------CTC------------------------------------------------------------------AACGCT------------------ACCGTAGGA---TTCGCCATTGGCATGGTCGGCTGGTTCTACATCCTGTATGAAATC---------------TTC------TTT---GGCGAGGCAAGTAAGGTCGCTGCAACA------CAG---GCACCACCAGCGGTG---CAA---ATG---TCT---TAC---ACG---CTCATG---AAATGGACGGTAACGGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILAA---I-TKVSG-GI------------FWR-LLIGTLVMLVPGYMGE---A------G--Y-----------L----------------------NA------TVG-FAIGMVGWFYILYEI-----F--F-GEASKVAAT--Q-APPAV-Q-M-S-Y-T-LM-KWTVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928206 [III-Gamma4-OM60] PRGD_OTU028_otuREP_fa8ed65cf4ed8780b3c7d4e145051c87 gb|KJ928206| PRGD_OTU028_otuREP_fa8ed65cf4ed8780b3c7d4e145051c87, putative proteorhodopsin gene, partial cds. PRGD_OTU028_otuREP_fa8ed65cf4ed8780b3c7d4e145051c87, putative proteorhodopsin gene, partial cds. KJ928206 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGCTGACCGTACCGCTCCTGATGATAGAGTTTTATCTCATACTGGCTGCTATCACAAAGGTGTCAGGCGGCATTTTCTGGCGATTGCTGATTGGAACGCTGGTAATGCTGGTCCCGGGCTACATGGGGGAAGCTGGCTACCTCAACGCCACCGTAGGATTCGCCATTGGCATGGTCGGCTGGTTCTTCATCCTCTATGAAATCTTCTTCGGCGAGGCAAGCAAAGTCGCTGCAACACAGGCACCACCAGCGGTGCAAATGTCTTACACACTCATGAAATGGACGGTAACGGTG LLTVPLLMIEFYLILAAITKVSGGIFWRLLIGTLVMLVPGYMGEAGYLNATVGFAIGMVGWFFILYEIFFGEASKVAATQAPPAVQMSYTLMKWTVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTGACCGTACCGCTCCTGATGATAGAGTTTTATCTCATACTGGCTGCT---------ATC---ACAAAGGTGTCAGGC---GGCATT------------------------------------TTCTGGCGA---TTGCTGATTGGAACGCTGGTAATGCTGGTCCCGGGCTACATGGGGGAA---------GCT------------------GGC------TAC---------------------------------CTC------------------------------------------------------------------AACGCC------------------ACCGTAGGA---TTCGCCATTGGCATGGTCGGCTGGTTCTTCATCCTCTATGAAATC---------------TTC------TTC---GGCGAGGCAAGCAAAGTCGCTGCAACA------CAG---GCACCACCAGCGGTG---CAA---ATG---TCT---TAC---ACA---CTCATG---AAATGGACGGTAACGGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILAA---I-TKVSG-GI------------FWR-LLIGTLVMLVPGYMGE---A------G--Y-----------L----------------------NA------TVG-FAIGMVGWFFILYEI-----F--F-GEASKVAAT--Q-APPAV-Q-M-S-Y-T-LM-KWTVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928226 [III-Gamma4-OM60] PRGD_OTU028_c46def0e013c9779810a54d32884cab5 gb|KJ928226| PRGD_OTU028_c46def0e013c9779810a54d32884cab5, putative proteorhodopsin gene, partial cds. PRGD_OTU028_c46def0e013c9779810a54d32884cab5, putative proteorhodopsin gene, partial cds. KJ928226 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73) CTTCTAACCGTGCCGCTGCTGATGATCGAGTTTTATCTGATACTCGCGGCGATCACGAAAGTATCAGGCGGAATTTTTTGGAGACTGCTCATTGGTACGCTGGTCATGCTCGTACCTGGCTACATGGGAGAGGCAGGTTATCTAAACGCCACTGTCGGATTTGTAATTGGCATGGTTGGCTGGCTCTTCATTTTGTATGAAATCTTTTTCGGCGAAGCCAGTAAAGTGGCAGCAACGAAGGCGCCGCCCGCTGTCCAGATGTCTTATACACTCATGAAGTGGACGGTGACTGTC LLTVPLLMIEFYLILAAITKVSGGIFWRLLIGTLVMLVPGYMGEAGYLNATVGFVIGMVGWLFILYEIFFGEASKVAATKAPPAVQMSYTLMKWTVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTAACCGTGCCGCTGCTGATGATCGAGTTTTATCTGATACTCGCGGCG---------ATC---ACGAAAGTATCAGGC---GGAATT------------------------------------TTTTGGAGA---CTGCTCATTGGTACGCTGGTCATGCTCGTACCTGGCTACATGGGAGAG---------GCA------------------GGT------TAT---------------------------------CTA------------------------------------------------------------------AACGCC------------------ACTGTCGGA---TTTGTAATTGGCATGGTTGGCTGGCTCTTCATTTTGTATGAAATC---------------TTT------TTC---GGCGAAGCCAGTAAAGTGGCAGCAACG------AAG---GCGCCGCCCGCTGTC---CAG---ATG---TCT---TAT---ACA---CTCATG---AAGTGGACGGTGACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILAA---I-TKVSG-GI------------FWR-LLIGTLVMLVPGYMGE---A------G--Y-----------L----------------------NA------TVG-FVIGMVGWLFILYEI-----F--F-GEASKVAAT--K-APPAV-Q-M-S-Y-T-LM-KWTVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928230 [III-Gamma4-OM60] PRGD_OTU028_d5c81f4be6cac65b4e0960afad54cdeb gb|KJ928230| PRGD_OTU028_d5c81f4be6cac65b4e0960afad54cdeb, putative proteorhodopsin gene, partial cds. PRGD_OTU028_d5c81f4be6cac65b4e0960afad54cdeb, putative proteorhodopsin gene, partial cds. KJ928230 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683) CTTCTAACCGTGCCGCTGCTGATGATCGAGTTTTATCTGATACTCGCGGCGATCACGAAAGTATCAGGCGGAATTTTTTGGAGACTGCTCATTGGTACGCTGGTCATGCTCGTACCTGGCTACATGGGAGAGGCAGGTTATCTAAACGCCACTGTCGGATTTGTAATTGGCATGGTTGGCTGGCTCTACATTTTGTATGAAATCTTTTTCGGCGAAGCCAGTAAAGTAGCAGCAACGAAAGCGCCGCCCGCTGTCCAGATGTCTTATACACTCATGAAGTGGACGGTGACTGTC LLTVPLLMIEFYLILAAITKVSGGIFWRLLIGTLVMLVPGYMGEAGYLNATVGFVIGMVGWLYILYEIFFGEASKVAATKAPPAVQMSYTLMKWTVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTAACCGTGCCGCTGCTGATGATCGAGTTTTATCTGATACTCGCGGCG---------ATC---ACGAAAGTATCAGGC---GGAATT------------------------------------TTTTGGAGA---CTGCTCATTGGTACGCTGGTCATGCTCGTACCTGGCTACATGGGAGAG---------GCA------------------GGT------TAT---------------------------------CTA------------------------------------------------------------------AACGCC------------------ACTGTCGGA---TTTGTAATTGGCATGGTTGGCTGGCTCTACATTTTGTATGAAATC---------------TTT------TTC---GGCGAAGCCAGTAAAGTAGCAGCAACG------AAA---GCGCCGCCCGCTGTC---CAG---ATG---TCT---TAT---ACA---CTCATG---AAGTGGACGGTGACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILAA---I-TKVSG-GI------------FWR-LLIGTLVMLVPGYMGE---A------G--Y-----------L----------------------NA------TVG-FVIGMVGWLYILYEI-----F--F-GEASKVAAT--K-APPAV-Q-M-S-Y-T-LM-KWTVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928225 [III-Gamma4-OM60] PRGD_OTU028_c3010af598cbae99ff3583a409cf61da gb|KJ928225| PRGD_OTU028_c3010af598cbae99ff3583a409cf61da, putative proteorhodopsin gene, partial cds. PRGD_OTU028_c3010af598cbae99ff3583a409cf61da, putative proteorhodopsin gene, partial cds. KJ928225 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCCTGACCGTCCCGCTTTTGATGATCGAGTTCTATCTGATACTCGCTGCCATCACTAAAGTCTCCGGCGGCATTTTTTGGAGACTGCTCATCGGAACGCTGGTGATGCTTGTACCGGGTTACATGGGGGAAGCTGGCTACCTCAACGCTACCGTAGGATTTGCTGTTGGCATGATCGGCTGGTTCTTCATCCTGTATGAGATCTTCTTCGGCGAAGCAAGTAAAGTCGCAGCCACACAGGCACCACCGGCGGTACAGATGTCTTACACACTGATGAAGTGGACCGTCACAGTG LLTVPLLMIEFYLILAAITKVSGGIFWRLLIGTLVMLVPGYMGEAGYLNATVGFAVGMIGWFFILYEIFFGEASKVAATQAPPAVQMSYTLMKWTVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTGACCGTCCCGCTTTTGATGATCGAGTTCTATCTGATACTCGCTGCC---------ATC---ACTAAAGTCTCCGGC---GGCATT------------------------------------TTTTGGAGA---CTGCTCATCGGAACGCTGGTGATGCTTGTACCGGGTTACATGGGGGAA---------GCT------------------GGC------TAC---------------------------------CTC------------------------------------------------------------------AACGCT------------------ACCGTAGGA---TTTGCTGTTGGCATGATCGGCTGGTTCTTCATCCTGTATGAGATC---------------TTC------TTC---GGCGAAGCAAGTAAAGTCGCAGCCACA------CAG---GCACCACCGGCGGTA---CAG---ATG---TCT---TAC---ACA---CTGATG---AAGTGGACCGTCACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILAA---I-TKVSG-GI------------FWR-LLIGTLVMLVPGYMGE---A------G--Y-----------L----------------------NA------TVG-FAVGMIGWFFILYEI-----F--F-GEASKVAAT--Q-APPAV-Q-M-S-Y-T-LM-KWTVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-OM60]_KJ928219 [III-Gamma4-OM60] PRGD_OTU028_763070d09bc34a47856d372d7c12e57a gb|KJ928219| PRGD_OTU028_763070d09bc34a47856d372d7c12e57a, putative proteorhodopsin gene, partial cds. PRGD_OTU028_763070d09bc34a47856d372d7c12e57a, putative proteorhodopsin gene, partial cds. KJ928219 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/OM60 IMCC3088-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 OM60 IMCC3088-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (72.0542, -130.8781; 69.5142, -133.4185), Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-33.28, 45.35) TTGTTGACTGTACCTTTACTGATGATCGAGTTCTATCTGATCCTGTCAGCGATCACGAAAGTGTCAGGTGGCATTTTCTGGCGTCTGCTGATCGGTACGTTGGTCATGCTGGTTCCAGGATACATGGGAGAAGCGGGCTACCTGAACGTTACCGTTGGTTTCACGATCGGTATGTTGGGATGGTTCTACATCCTTTATGAAATCTTTGCCGGTGAAGCAAGTAAAGTTGCAGCCTCACTAGCATCGCCAGCAGTACAGAAGTCATTCAGTCTGATGAAGTGGACTGTCACCATT LLTVPLLMIEFYLILSAITKVSGGIFWRLLIGTLVMLVPGYMGEAGYLNVTVGFTIGMLGWFYILYEIFAGEASKVAASLASPAVQKSFSLMKWTVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTGACTGTACCTTTACTGATGATCGAGTTCTATCTGATCCTGTCAGCG---------ATC---ACGAAAGTGTCAGGT---GGCATT------------------------------------TTCTGGCGT---CTGCTGATCGGTACGTTGGTCATGCTGGTTCCAGGATACATGGGAGAA---------GCG------------------GGC------TAC---------------------------------CTG------------------------------------------------------------------AACGTT------------------ACCGTTGGT---TTCACGATCGGTATGTTGGGATGGTTCTACATCCTTTATGAAATC---------------TTT------GCC---GGTGAAGCAAGTAAAGTTGCAGCCTCA------CTA---GCATCGCCAGCAGTA---CAG---AAG---TCA---TTC---AGT---CTGATG---AAGTGGACTGTCACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILSA---I-TKVSG-GI------------FWR-LLIGTLVMLVPGYMGE---A------G--Y-----------L----------------------NV------TVG-FTIGMLGWFYILYEI-----F--A-GEASKVAAS--L-ASPAV-Q-K-S-F-S-LM-KWTVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-Himb30]_KJ928405 [III-Gamma4-Himb30] PRGD_OTU035a_6de4ad3654862f82ca02aa512c7cb887 gb|KJ928405| PRGD_OTU035a_6de4ad3654862f82ca02aa512c7cb887, putative proteorhodopsin gene, partial cds. PRGD_OTU035a_6de4ad3654862f82ca02aa512c7cb887, putative proteorhodopsin gene, partial cds. KJ928405 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Himb30-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Himb30-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) TTATTGACGGTCCCACTCTTGATGATTGAGTTCTTCTTGATCTTGAGAGCGATTGGTAACGCATCAGGTGGCATCTTCTGGCGCCTCCTCATCGGTACACTCGTCATGCTCGTCCCGGGCTACATGGGTGAAGCCGGTTACATCAACGTCACCGTTGGCTTCGTCATTGGTATGCTTGGATGGTTCTACATTCTGTATGAAATCTTCGCAGGTGAAGCAGCACAAATGGCTGCAGAACAAGCGCCTGAAGCAGTTCAGAGTGCATACGGCACAATGCGTTGGGTTGTGACAATC LLTVPLLMIEFFLILRAIGNASGGIFWRLLIGTLVMLVPGYMGEAGYINVTVGFVIGMLGWFYILYEIFAGEAAQMAAEQAPEAVQSAYGTMRWVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTGACGGTCCCACTCTTGATGATTGAGTTCTTCTTGATCTTGAGAGCG---------ATT---GGTAACGCATCAGGT---GGCATC------------------------------------TTCTGGCGC---CTCCTCATCGGTACACTCGTCATGCTCGTCCCGGGCTACATGGGTGAA---------GCC------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGTC------------------ACCGTTGGC---TTCGTCATTGGTATGCTTGGATGGTTCTACATTCTGTATGAAATC---------------TTC------GCA---GGTGAAGCAGCACAAATGGCTGCAGAA------CAA---GCGCCTGAAGCAGTT---CAG---AGT---GCA---TAC---GGC---ACAATG---CGTTGGGTTGTGACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFFLILRA---I-GNASG-GI------------FWR-LLIGTLVMLVPGYMGE---A------G--Y-----------I----------------------NV------TVG-FVIGMLGWFYILYEI-----F--A-GEAAQMAAE--Q-APEAV-Q-S-A-Y-G-TM-RWVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-Himb30]_KJ928414 [III-Gamma4-Himb30] PRGD_OTU035a_e19d223771665b5f4d5e53741cf14e8b gb|KJ928414| PRGD_OTU035a_e19d223771665b5f4d5e53741cf14e8b, putative proteorhodopsin gene, partial cds. PRGD_OTU035a_e19d223771665b5f4d5e53741cf14e8b, putative proteorhodopsin gene, partial cds. KJ928414 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Himb30-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Himb30-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTATTGACGGTCCCACTCTTGATGATTGAGTTCTTCTTGATCTTGAGAGCGATTGGTAACGCATCAGGTGGCATCTTCTGGCGCCTCCTCATCGGTACGCTCGTCATGCTCGTCCCGGGCTACATGGGTGAAGCCGGTTACATCAACGTCACCGTTGGCTTTGTCATTGGTATGCTTGGATGGTTCTACATTCTGTATGAAATCTTCGCAGGTGAAGCGGCGCAAATGGCTGCAGAACAAGCACCTGAAGCAGTTCAGAGTGCATACGGCACAATGCGTTGGGTCGTGACAATC LLTVPLLMIEFFLILRAIGNASGGIFWRLLIGTLVMLVPGYMGEAGYINVTVGFVIGMLGWFYILYEIFAGEAAQMAAEQAPEAVQSAYGTMRWVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTGACGGTCCCACTCTTGATGATTGAGTTCTTCTTGATCTTGAGAGCG---------ATT---GGTAACGCATCAGGT---GGCATC------------------------------------TTCTGGCGC---CTCCTCATCGGTACGCTCGTCATGCTCGTCCCGGGCTACATGGGTGAA---------GCC------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGTC------------------ACCGTTGGC---TTTGTCATTGGTATGCTTGGATGGTTCTACATTCTGTATGAAATC---------------TTC------GCA---GGTGAAGCGGCGCAAATGGCTGCAGAA------CAA---GCACCTGAAGCAGTT---CAG---AGT---GCA---TAC---GGC---ACAATG---CGTTGGGTCGTGACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFFLILRA---I-GNASG-GI------------FWR-LLIGTLVMLVPGYMGE---A------G--Y-----------I----------------------NV------TVG-FVIGMLGWFYILYEI-----F--A-GEAAQMAAE--Q-APEAV-Q-S-A-Y-G-TM-RWVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-Himb30]_KJ928396 [III-Gamma4-Himb30] PRGD_OTU035a_otuREP_1c79b088e0739f621c81687d375a1c26 gb|KJ928396| PRGD_OTU035a_otuREP_1c79b088e0739f621c81687d375a1c26, putative proteorhodopsin gene, partial cds. PRGD_OTU035a_otuREP_1c79b088e0739f621c81687d375a1c26, putative proteorhodopsin gene, partial cds. KJ928396 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Himb30-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Himb30-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) TTATTGACGGTCCCACTCTTGATGATTGAGTTCTTCTTGATCTTGAGAGCGATTGGTAACGCATCAGGTGGCATCTTCTGGCGCCTCCTCATCGGTACGCTCGTCATGCTCGTCCCGGGCTACATGGGTGAAGCCGGTTACATCAACGTCACCGTTGGCTTCGTCATTGGTATGCTTGGATGGTTCTACATTCTGTATGAAATCTTCGCAGGTGAAGCAGCACAAATGGCTGCAGAACAAGCGCCTGAAGCAGTTCAGAGTGCATACGGCACAATGCGTTGGGTCGTGACAATC LLTVPLLMIEFFLILRAIGNASGGIFWRLLIGTLVMLVPGYMGEAGYINVTVGFVIGMLGWFYILYEIFAGEAAQMAAEQAPEAVQSAYGTMRWVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTGACGGTCCCACTCTTGATGATTGAGTTCTTCTTGATCTTGAGAGCG---------ATT---GGTAACGCATCAGGT---GGCATC------------------------------------TTCTGGCGC---CTCCTCATCGGTACGCTCGTCATGCTCGTCCCGGGCTACATGGGTGAA---------GCC------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGTC------------------ACCGTTGGC---TTCGTCATTGGTATGCTTGGATGGTTCTACATTCTGTATGAAATC---------------TTC------GCA---GGTGAAGCAGCACAAATGGCTGCAGAA------CAA---GCGCCTGAAGCAGTT---CAG---AGT---GCA---TAC---GGC---ACAATG---CGTTGGGTCGTGACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFFLILRA---I-GNASG-GI------------FWR-LLIGTLVMLVPGYMGE---A------G--Y-----------I----------------------NV------TVG-FVIGMLGWFYILYEI-----F--A-GEAAQMAAE--Q-APEAV-Q-S-A-Y-G-TM-RWVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-Himb30]_KJ928398 [III-Gamma4-Himb30] PRGD_OTU035a_08c689d98abc3f4fa0587bdd7bb3ff7b gb|KJ928398| PRGD_OTU035a_08c689d98abc3f4fa0587bdd7bb3ff7b, putative proteorhodopsin gene, partial cds. PRGD_OTU035a_08c689d98abc3f4fa0587bdd7bb3ff7b, putative proteorhodopsin gene, partial cds. KJ928398 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Himb30-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Himb30-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTATTGACGGTCCCACTCTTGATGATTGAGTTCTTCTTGATCTTGAGAGCGATTGGTAACGCATCAGGTGGCATCTTCTGGCGCCTCCTCATCGGTACGCTCGTCATGCTCGTCCCGGGCTTCCTGGGTGAAGCCGGTTACATCAACGTCACCGTTGGCTTCGTCATTGGTATGCTTGGATGGTTCTACATTCTGTATGAAATCTTCGCAGGTGAAGCAGCACAAATGGCTGCAGAACAAGCGCCTGAAGCAGTTCAGAGTGCATACGGCACAATGCGTTGGGTCGTGACAATC LLTVPLLMIEFFLILRAIGNASGGIFWRLLIGTLVMLVPGFLGEAGYINVTVGFVIGMLGWFYILYEIFAGEAAQMAAEQAPEAVQSAYGTMRWVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTGACGGTCCCACTCTTGATGATTGAGTTCTTCTTGATCTTGAGAGCG---------ATT---GGTAACGCATCAGGT---GGCATC------------------------------------TTCTGGCGC---CTCCTCATCGGTACGCTCGTCATGCTCGTCCCGGGCTTCCTGGGTGAA---------GCC------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGTC------------------ACCGTTGGC---TTCGTCATTGGTATGCTTGGATGGTTCTACATTCTGTATGAAATC---------------TTC------GCA---GGTGAAGCAGCACAAATGGCTGCAGAA------CAA---GCGCCTGAAGCAGTT---CAG---AGT---GCA---TAC---GGC---ACAATG---CGTTGGGTCGTGACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFFLILRA---I-GNASG-GI------------FWR-LLIGTLVMLVPGFLGE---A------G--Y-----------I----------------------NV------TVG-FVIGMLGWFYILYEI-----F--A-GEAAQMAAE--Q-APEAV-Q-S-A-Y-G-TM-RWVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-Himb30]_KJ928402 [III-Gamma4-Himb30] PRGD_OTU035a_3a8dcb3bc1855202cbff68fb06a8d542 gb|KJ928402| PRGD_OTU035a_3a8dcb3bc1855202cbff68fb06a8d542, putative proteorhodopsin gene, partial cds. PRGD_OTU035a_3a8dcb3bc1855202cbff68fb06a8d542, putative proteorhodopsin gene, partial cds. KJ928402 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Himb30-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Himb30-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508) TTATTGACGGTCCCACTCTTAATGATTGAGTTCTTCTTGATCTTGAGAGCGATTGGCAACGCATCAGGTGGCATCTTCTGGCGCCTCCTCATCGGTACGCTCGTCATGCTCGTCCCGGGCTACATGGGTGAAGCCGGTTACATCAACGTCACCGTTGGCTTCGTCATTGGTATGCTTGGATGGTTCTACATTCTGTATGAAATCTTCGCAGGTGAAGCAGCACAAATGGCTGCAGAACAAGCGCCTGAAGCAGTCCAGAGTGCATACGGCACAATGCGTTGGGTCGTAACAATC LLTVPLLMIEFFLILRAIGNASGGIFWRLLIGTLVMLVPGYMGEAGYINVTVGFVIGMLGWFYILYEIFAGEAAQMAAEQAPEAVQSAYGTMRWVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTGACGGTCCCACTCTTAATGATTGAGTTCTTCTTGATCTTGAGAGCG---------ATT---GGCAACGCATCAGGT---GGCATC------------------------------------TTCTGGCGC---CTCCTCATCGGTACGCTCGTCATGCTCGTCCCGGGCTACATGGGTGAA---------GCC------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGTC------------------ACCGTTGGC---TTCGTCATTGGTATGCTTGGATGGTTCTACATTCTGTATGAAATC---------------TTC------GCA---GGTGAAGCAGCACAAATGGCTGCAGAA------CAA---GCGCCTGAAGCAGTC---CAG---AGT---GCA---TAC---GGC---ACAATG---CGTTGGGTCGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFFLILRA---I-GNASG-GI------------FWR-LLIGTLVMLVPGYMGE---A------G--Y-----------I----------------------NV------TVG-FVIGMLGWFYILYEI-----F--A-GEAAQMAAE--Q-APEAV-Q-S-A-Y-G-TM-RWVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-Himb30]_KJ928411 [III-Gamma4-Himb30] PRGD_OTU035a_bd11f83d11204d71b571a02cfdbe5883 gb|KJ928411| PRGD_OTU035a_bd11f83d11204d71b571a02cfdbe5883, putative proteorhodopsin gene, partial cds. PRGD_OTU035a_bd11f83d11204d71b571a02cfdbe5883, putative proteorhodopsin gene, partial cds. KJ928411 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Himb30-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Himb30-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Indian Ocean (-35.05, 23.73) TTATTGACGGTCCCACTCTTGATGATTGAGTTCTTCTTGATCTTGAGAGCGATTGGTAACGCATCAGGCGGCATCTTCTGGCGCCTCCTCATCGGCACGCTCGTTATGCTCGTCCCGGGCTATATGGGTGAAGCCGGTTACATCAACGTCACCGTTGGTTTCGTCATCGGTATGCTTGGATGGTTCTATATTCTGTATGAAATCTTCGCAGGTGAAGCAGCGCAAATGGCTGCAGAACAAGCGCCTGAAGCAGTCCAGAGTGCATATGGCACAATGCGTTGGGTCGTCACAATC LLTVPLLMIEFFLILRAIGNASGGIFWRLLIGTLVMLVPGYMGEAGYINVTVGFVIGMLGWFYILYEIFAGEAAQMAAEQAPEAVQSAYGTMRWVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTGACGGTCCCACTCTTGATGATTGAGTTCTTCTTGATCTTGAGAGCG---------ATT---GGTAACGCATCAGGC---GGCATC------------------------------------TTCTGGCGC---CTCCTCATCGGCACGCTCGTTATGCTCGTCCCGGGCTATATGGGTGAA---------GCC------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGTC------------------ACCGTTGGT---TTCGTCATCGGTATGCTTGGATGGTTCTATATTCTGTATGAAATC---------------TTC------GCA---GGTGAAGCAGCGCAAATGGCTGCAGAA------CAA---GCGCCTGAAGCAGTC---CAG---AGT---GCA---TAT---GGC---ACAATG---CGTTGGGTCGTCACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFFLILRA---I-GNASG-GI------------FWR-LLIGTLVMLVPGYMGE---A------G--Y-----------I----------------------NV------TVG-FVIGMLGWFYILYEI-----F--A-GEAAQMAAE--Q-APEAV-Q-S-A-Y-G-TM-RWVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-Himb30]_KJ928404 [III-Gamma4-Himb30] PRGD_OTU035a_4ea0ef5bcddedc18f54250423248a859 gb|KJ928404| PRGD_OTU035a_4ea0ef5bcddedc18f54250423248a859, putative proteorhodopsin gene, partial cds. PRGD_OTU035a_4ea0ef5bcddedc18f54250423248a859, putative proteorhodopsin gene, partial cds. KJ928404 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Himb30-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Himb30-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTATTGACGGTCCCACTCTTGATGATTGAGTTCTTCTTGATCTTGAGAGCGATTGGTAACGCATCAGGCGGCATCTTCTGGCGCCTCCTCATCGGTACGCTCGTTATGCTCGTCCCGGGCTACATGGGTGAAGCCGGTTACATCAACGTCACCGTTGGTTTCGTCATCGGTATACTTGGATGGTTCTATATTCTGTATGAAATCTTCGCAGGTGAAGCAGCGCAAATGGCTGCAGAACAAGCGCCTGAAGCAGTCCAGAGTGCATATGGCACAATGCGTTGGGTCGTCACAATC LLTVPLLMIEFFLILRAIGNASGGIFWRLLIGTLVMLVPGYMGEAGYINVTVGFVIGILGWFYILYEIFAGEAAQMAAEQAPEAVQSAYGTMRWVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTGACGGTCCCACTCTTGATGATTGAGTTCTTCTTGATCTTGAGAGCG---------ATT---GGTAACGCATCAGGC---GGCATC------------------------------------TTCTGGCGC---CTCCTCATCGGTACGCTCGTTATGCTCGTCCCGGGCTACATGGGTGAA---------GCC------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGTC------------------ACCGTTGGT---TTCGTCATCGGTATACTTGGATGGTTCTATATTCTGTATGAAATC---------------TTC------GCA---GGTGAAGCAGCGCAAATGGCTGCAGAA------CAA---GCGCCTGAAGCAGTC---CAG---AGT---GCA---TAT---GGC---ACAATG---CGTTGGGTCGTCACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFFLILRA---I-GNASG-GI------------FWR-LLIGTLVMLVPGYMGE---A------G--Y-----------I----------------------NV------TVG-FVIGILGWFYILYEI-----F--A-GEAAQMAAE--Q-APEAV-Q-S-A-Y-G-TM-RWVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-Himb30]_KJ928399 [III-Gamma4-Himb30] PRGD_OTU035a_10cd6d50f155cd532ac3d2a489b8bd66 gb|KJ928399| PRGD_OTU035a_10cd6d50f155cd532ac3d2a489b8bd66, putative proteorhodopsin gene, partial cds. PRGD_OTU035a_10cd6d50f155cd532ac3d2a489b8bd66, putative proteorhodopsin gene, partial cds. KJ928399 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Himb30-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Himb30-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -33.28, 45.35) TTATTGACGGTCCCACTCTTGATGATTGAGTTCTTCTTGATCTTGAGAGCGATTGGCAACGCATCAGGTGGCATCTTCTGGCGCCTCCTCATCGGTACGCTCGTTATGCTCGTCCCGGGCTACATGGGTGAAGCCGGTTACATCAACGTCACCGTTGGCTTCGTCATCGGTATGCTTGGATGGTTCTATATTCTGTATGAAATCTTCGCAGGTGAAGCAGCGCAAATGGCTGCAGAACAAGCGCCTGAAGCAGTCCAGAGTGCATACGGCACAATGCGTTGGGTCGTCACAATC LLTVPLLMIEFFLILRAIGNASGGIFWRLLIGTLVMLVPGYMGEAGYINVTVGFVIGMLGWFYILYEIFAGEAAQMAAEQAPEAVQSAYGTMRWVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTGACGGTCCCACTCTTGATGATTGAGTTCTTCTTGATCTTGAGAGCG---------ATT---GGCAACGCATCAGGT---GGCATC------------------------------------TTCTGGCGC---CTCCTCATCGGTACGCTCGTTATGCTCGTCCCGGGCTACATGGGTGAA---------GCC------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGTC------------------ACCGTTGGC---TTCGTCATCGGTATGCTTGGATGGTTCTATATTCTGTATGAAATC---------------TTC------GCA---GGTGAAGCAGCGCAAATGGCTGCAGAA------CAA---GCGCCTGAAGCAGTC---CAG---AGT---GCA---TAC---GGC---ACAATG---CGTTGGGTCGTCACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFFLILRA---I-GNASG-GI------------FWR-LLIGTLVMLVPGYMGE---A------G--Y-----------I----------------------NV------TVG-FVIGMLGWFYILYEI-----F--A-GEAAQMAAE--Q-APEAV-Q-S-A-Y-G-TM-RWVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-Himb30]_KJ928412 [III-Gamma4-Himb30] PRGD_OTU035a_c1fccf2e8f56b43dc8b5e8342bd883d3 gb|KJ928412| PRGD_OTU035a_c1fccf2e8f56b43dc8b5e8342bd883d3, putative proteorhodopsin gene, partial cds. PRGD_OTU035a_c1fccf2e8f56b43dc8b5e8342bd883d3, putative proteorhodopsin gene, partial cds. KJ928412 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Himb30-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Himb30-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTATTGACGGTCCCACTCTTGATGATTGAGTTCTTCTTGATCTTGAGAGCGATTGGTAACGCATCAGGTGGCATCTTCTGGCGCCTCCTCATCGGTACGCTCGTTATGCTCGTCCCGGGCTACATGGGTGAAGCCGGTTACATCAACGTCACCGTTGGCTTCGTCATTGGTATGCTTGGATGGTTCTACATTCTGTATGAAATCTTCGCAGGTGAAGCAGCGCAAATGGCTGCAGAACAAGCGCCTGAAGCAGTCCAGAGTGCATACGGCACAATGCGTTGGGTCGTCACAATC LLTVPLLMIEFFLILRAIGNASGGIFWRLLIGTLVMLVPGYMGEAGYINVTVGFVIGMLGWFYILYEIFAGEAAQMAAEQAPEAVQSAYGTMRWVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTGACGGTCCCACTCTTGATGATTGAGTTCTTCTTGATCTTGAGAGCG---------ATT---GGTAACGCATCAGGT---GGCATC------------------------------------TTCTGGCGC---CTCCTCATCGGTACGCTCGTTATGCTCGTCCCGGGCTACATGGGTGAA---------GCC------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGTC------------------ACCGTTGGC---TTCGTCATTGGTATGCTTGGATGGTTCTACATTCTGTATGAAATC---------------TTC------GCA---GGTGAAGCAGCGCAAATGGCTGCAGAA------CAA---GCGCCTGAAGCAGTC---CAG---AGT---GCA---TAC---GGC---ACAATG---CGTTGGGTCGTCACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFFLILRA---I-GNASG-GI------------FWR-LLIGTLVMLVPGYMGE---A------G--Y-----------I----------------------NV------TVG-FVIGMLGWFYILYEI-----F--A-GEAAQMAAE--Q-APEAV-Q-S-A-Y-G-TM-RWVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-Himb30]_KJ928406 [III-Gamma4-Himb30] PRGD_OTU035a_7fa9b8b17f5cf89143663dfb46f49d0c gb|KJ928406| PRGD_OTU035a_7fa9b8b17f5cf89143663dfb46f49d0c, putative proteorhodopsin gene, partial cds. PRGD_OTU035a_7fa9b8b17f5cf89143663dfb46f49d0c, putative proteorhodopsin gene, partial cds. KJ928406 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Himb30-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Himb30-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-23.5956, 69.0419) TTATTGACGGTCCCACTCTTGATGATTGAGTTCTTCTTGATCTTGAGAGCGATTGGTAACGCATCAGGTGGCATCTTCTGGCGCCTCCTCATCGGTACGCTCGTCATGCTCGTCCCGGGCTACATGGGTGAAGCCGGTTACATCAACGTCACCGTTGGCTTCGTTATCGGTATGCTTGGATGGTTCTACATTCTGTATGAAATCTTCGCAGGTGAAGCAGCTCAAATGGCTGCAGAACAAGCCCCTGAAGCAGTCCAGAGCGCCTACGGCACAATGCGTTGGGTCGTGACAGTC LLTVPLLMIEFFLILRAIGNASGGIFWRLLIGTLVMLVPGYMGEAGYINVTVGFVIGMLGWFYILYEIFAGEAAQMAAEQAPEAVQSAYGTMRWVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTGACGGTCCCACTCTTGATGATTGAGTTCTTCTTGATCTTGAGAGCG---------ATT---GGTAACGCATCAGGT---GGCATC------------------------------------TTCTGGCGC---CTCCTCATCGGTACGCTCGTCATGCTCGTCCCGGGCTACATGGGTGAA---------GCC------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGTC------------------ACCGTTGGC---TTCGTTATCGGTATGCTTGGATGGTTCTACATTCTGTATGAAATC---------------TTC------GCA---GGTGAAGCAGCTCAAATGGCTGCAGAA------CAA---GCCCCTGAAGCAGTC---CAG---AGC---GCC---TAC---GGC---ACAATG---CGTTGGGTCGTGACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFFLILRA---I-GNASG-GI------------FWR-LLIGTLVMLVPGYMGE---A------G--Y-----------I----------------------NV------TVG-FVIGMLGWFYILYEI-----F--A-GEAAQMAAE--Q-APEAV-Q-S-A-Y-G-TM-RWVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-Himb30]_KJ928400 [III-Gamma4-Himb30] PRGD_OTU035a_1f55a2b2ed9cfd0d1aad8dbb03f72ed0 gb|KJ928400| PRGD_OTU035a_1f55a2b2ed9cfd0d1aad8dbb03f72ed0, putative proteorhodopsin gene, partial cds. PRGD_OTU035a_1f55a2b2ed9cfd0d1aad8dbb03f72ed0, putative proteorhodopsin gene, partial cds. KJ928400 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Himb30-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Himb30-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTATTGACGGTCCCACTCTTGATGATCGAGTTCTTCTTGATTTTGAGAGCGATTGGTAACGCATCAGGTGGCATCTTCTGGCGCCTCCTCATCGGTACGCTAGTCATGCTCGTCCCAGGCTTCATGGGCGAAGCCGGTTACATCAACGTCACCGTTGGATTCGTGATTGGTATGCTCGGATGGTTCTATATCCTGTATGAAATCTTCGCAGGGGAAGCAGCGCAAATGGCTTCAGAACAAGCTCCTGAAGCAGTGCAAAGTGCCTACGGAACAATGCGCTGGGTCGTCACAATC LLTVPLLMIEFFLILRAIGNASGGIFWRLLIGTLVMLVPGFMGEAGYINVTVGFVIGMLGWFYILYEIFAGEAAQMASEQAPEAVQSAYGTMRWVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTGACGGTCCCACTCTTGATGATCGAGTTCTTCTTGATTTTGAGAGCG---------ATT---GGTAACGCATCAGGT---GGCATC------------------------------------TTCTGGCGC---CTCCTCATCGGTACGCTAGTCATGCTCGTCCCAGGCTTCATGGGCGAA---------GCC------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGTC------------------ACCGTTGGA---TTCGTGATTGGTATGCTCGGATGGTTCTATATCCTGTATGAAATC---------------TTC------GCA---GGGGAAGCAGCGCAAATGGCTTCAGAA------CAA---GCTCCTGAAGCAGTG---CAA---AGT---GCC---TAC---GGA---ACAATG---CGCTGGGTCGTCACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFFLILRA---I-GNASG-GI------------FWR-LLIGTLVMLVPGFMGE---A------G--Y-----------I----------------------NV------TVG-FVIGMLGWFYILYEI-----F--A-GEAAQMASE--Q-APEAV-Q-S-A-Y-G-TM-RWVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-Himb30]_KJ928408 [III-Gamma4-Himb30] PRGD_OTU035a_90554e57a755a31e0c31c8f55cdeb72d gb|KJ928408| PRGD_OTU035a_90554e57a755a31e0c31c8f55cdeb72d, putative proteorhodopsin gene, partial cds. PRGD_OTU035a_90554e57a755a31e0c31c8f55cdeb72d, putative proteorhodopsin gene, partial cds. KJ928408 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Himb30-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Himb30-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) TTATTGACGGTCCCACTCTTGATGATTGAGTTTTTCTTGATCTTGAGAGCGATTGGTAACGCATCAGGTGGCATCTTTTGGCGCCTCCTCATCGGTACGCTAGTCATGCTGGTCCCAGGCTTTTTGGGTGAAGCCGGTTACATCAACGTTACCGTTGGTTTCGTAATTGGTATGCTCGGATGGTTCTATATCTTATATGAAATCTTCGCAGGCGAGGCCGCGCAGATGGCTGCAGAACAAGCTCCCGAAGCAGTTCAAAGCGCTTACAGCACAATGCGTTGGGTCGTCACAATC LLTVPLLMIEFFLILRAIGNASGGIFWRLLIGTLVMLVPGFLGEAGYINVTVGFVIGMLGWFYILYEIFAGEAAQMAAEQAPEAVQSAYSTMRWVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTGACGGTCCCACTCTTGATGATTGAGTTTTTCTTGATCTTGAGAGCG---------ATT---GGTAACGCATCAGGT---GGCATC------------------------------------TTTTGGCGC---CTCCTCATCGGTACGCTAGTCATGCTGGTCCCAGGCTTTTTGGGTGAA---------GCC------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AACGTT------------------ACCGTTGGT---TTCGTAATTGGTATGCTCGGATGGTTCTATATCTTATATGAAATC---------------TTC------GCA---GGCGAGGCCGCGCAGATGGCTGCAGAA------CAA---GCTCCCGAAGCAGTT---CAA---AGC---GCT---TAC---AGC---ACAATG---CGTTGGGTCGTCACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFFLILRA---I-GNASG-GI------------FWR-LLIGTLVMLVPGFLGE---A------G--Y-----------I----------------------NV------TVG-FVIGMLGWFYILYEI-----F--A-GEAAQMAAE--Q-APEAV-Q-S-A-Y-S-TM-RWVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-Himb30]_KJ928403 [III-Gamma4-Himb30] PRGD_OTU035a_3c3f7a89362b7b29aadc36c3257898fc gb|KJ928403| PRGD_OTU035a_3c3f7a89362b7b29aadc36c3257898fc, putative proteorhodopsin gene, partial cds. PRGD_OTU035a_3c3f7a89362b7b29aadc36c3257898fc, putative proteorhodopsin gene, partial cds. KJ928403 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Himb30-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Himb30-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTGTTGACCGTCCCACTCTTGATGATTGAGTTCTTCTTGATCCTAAGAGCGATTGGCAATGCGTCGGGCGGCATCTTCTGGCGACTCCTGATTGGTACCCTCGTAATGTTGGTTCCAGGCTACATGGGTGAGGCTGGTTACATTAACGTAACTGTCGGATTCGTCATTGGTCTGGCCGGATGGTTCTACATCTTGTACGAAATTTTTGCGGGCGAAGCCGCCAAAATGGCTGCTGACGAGGCTCCAGAAGCGGTTCAAAGCGCATACGGTACGATGCGTATGGTTGTTACCGTT LLTVPLLMIEFFLILRAIGNASGGIFWRLLIGTLVMLVPGYMGEAGYINVTVGFVIGLAGWFYILYEIFAGEAAKMAADEAPEAVQSAYGTMRMVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTGACCGTCCCACTCTTGATGATTGAGTTCTTCTTGATCCTAAGAGCG---------ATT---GGCAATGCGTCGGGC---GGCATC------------------------------------TTCTGGCGA---CTCCTGATTGGTACCCTCGTAATGTTGGTTCCAGGCTACATGGGTGAG---------GCT------------------GGT------TAC---------------------------------ATT------------------------------------------------------------------AACGTA------------------ACTGTCGGA---TTCGTCATTGGTCTGGCCGGATGGTTCTACATCTTGTACGAAATT---------------TTT------GCG---GGCGAAGCCGCCAAAATGGCTGCTGAC------GAG---GCTCCAGAAGCGGTT---CAA---AGC---GCA---TAC---GGT---ACGATG---CGTATGGTTGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFFLILRA---I-GNASG-GI------------FWR-LLIGTLVMLVPGYMGE---A------G--Y-----------I----------------------NV------TVG-FVIGLAGWFYILYEI-----F--A-GEAAKMAAD--E-APEAV-Q-S-A-Y-G-TM-RMVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-Himb30]_KJ928407 [III-Gamma4-Himb30] PRGD_OTU035a_8c27fefe9ce6c6b685745578d60a6bbf gb|KJ928407| PRGD_OTU035a_8c27fefe9ce6c6b685745578d60a6bbf, putative proteorhodopsin gene, partial cds. PRGD_OTU035a_8c27fefe9ce6c6b685745578d60a6bbf, putative proteorhodopsin gene, partial cds. KJ928407 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Himb30-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Himb30-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTGTTGACCGTCCCACTCTTGATGATTGAGTTCTTCTTGATCCTAAGAGCGATTGGTAATGCGTCGGGCGGTATCTTCTGGCGACTCCTTATTGGTACCCTCGTAATGTTGGTTCCGGGCTATATGGGTGAGGCTGGTTACATTAACGTAACTGTCGGATTCGTCATTGGTCTGGCCGGATGGTTCTACATCTTGTACGAAATTTTTGCGGGCGAAGCCGCCAAAATGGCTGCTGATGAGGCTCCAGAAGCGGTTCAAAGCGCATACGGTACGATGCGTATGGTTGTTACCGTT LLTVPLLMIEFFLILRAIGNASGGIFWRLLIGTLVMLVPGYMGEAGYINVTVGFVIGLAGWFYILYEIFAGEAAKMAADEAPEAVQSAYGTMRMVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTGACCGTCCCACTCTTGATGATTGAGTTCTTCTTGATCCTAAGAGCG---------ATT---GGTAATGCGTCGGGC---GGTATC------------------------------------TTCTGGCGA---CTCCTTATTGGTACCCTCGTAATGTTGGTTCCGGGCTATATGGGTGAG---------GCT------------------GGT------TAC---------------------------------ATT------------------------------------------------------------------AACGTA------------------ACTGTCGGA---TTCGTCATTGGTCTGGCCGGATGGTTCTACATCTTGTACGAAATT---------------TTT------GCG---GGCGAAGCCGCCAAAATGGCTGCTGAT------GAG---GCTCCAGAAGCGGTT---CAA---AGC---GCA---TAC---GGT---ACGATG---CGTATGGTTGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFFLILRA---I-GNASG-GI------------FWR-LLIGTLVMLVPGYMGE---A------G--Y-----------I----------------------NV------TVG-FVIGLAGWFYILYEI-----F--A-GEAAKMAAD--E-APEAV-Q-S-A-Y-G-TM-RMVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-Himb30]_KJ928413 [III-Gamma4-Himb30] PRGD_OTU035a_c8483d7d4a78aecff3df8c9e878f014d gb|KJ928413| PRGD_OTU035a_c8483d7d4a78aecff3df8c9e878f014d, putative proteorhodopsin gene, partial cds. PRGD_OTU035a_c8483d7d4a78aecff3df8c9e878f014d, putative proteorhodopsin gene, partial cds. KJ928413 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Himb30-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Himb30-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTGTTGACCGTCCCACTCTTGATGATTGAGTTCTTCTTGATCCTAAGAGCGATTGGCAATGCGTCGGGCGGCATCTTCTGGCGTCTATTGATTGGTACCCTCGTAATGTTGGTTCCAGGCTACATGGGTGAGGCTGGTTACATTAACGTAACTGTCGGATTCGTCATCGGTCTGGCCGGATGGTTCTACATCTTGTACGAAATTTTTGCCGGCGAAGCTGCCAAAATGGCTGCCGACGAGGCTCCAGAGGCGGTTCAAAGCGCATACGGTACGATGCGTATGGTTGTTACCGTT LLTVPLLMIEFFLILRAIGNASGGIFWRLLIGTLVMLVPGYMGEAGYINVTVGFVIGLAGWFYILYEIFAGEAAKMAADEAPEAVQSAYGTMRMVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTGACCGTCCCACTCTTGATGATTGAGTTCTTCTTGATCCTAAGAGCG---------ATT---GGCAATGCGTCGGGC---GGCATC------------------------------------TTCTGGCGT---CTATTGATTGGTACCCTCGTAATGTTGGTTCCAGGCTACATGGGTGAG---------GCT------------------GGT------TAC---------------------------------ATT------------------------------------------------------------------AACGTA------------------ACTGTCGGA---TTCGTCATCGGTCTGGCCGGATGGTTCTACATCTTGTACGAAATT---------------TTT------GCC---GGCGAAGCTGCCAAAATGGCTGCCGAC------GAG---GCTCCAGAGGCGGTT---CAA---AGC---GCA---TAC---GGT---ACGATG---CGTATGGTTGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFFLILRA---I-GNASG-GI------------FWR-LLIGTLVMLVPGYMGE---A------G--Y-----------I----------------------NV------TVG-FVIGLAGWFYILYEI-----F--A-GEAAKMAAD--E-APEAV-Q-S-A-Y-G-TM-RMVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-Himb30]_KJ928415 [III-Gamma4-Himb30] PRGD_OTU035a_f4778a1e9efea08151f26e13544eba2d gb|KJ928415| PRGD_OTU035a_f4778a1e9efea08151f26e13544eba2d, putative proteorhodopsin gene, partial cds. PRGD_OTU035a_f4778a1e9efea08151f26e13544eba2d, putative proteorhodopsin gene, partial cds. KJ928415 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Himb30-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Himb30-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTGTTGACCGTCCCACTCTTGATGATCGAGTTCTTCTTGATTCTACGAGCGATTGGCAATGCATCGGGCGGCATCTTCTGGCGACTCTTGATTGGTACCCTCGTAATGTTGGTTCCAGGCTACATGGGCGAGGCTGGTTACATTAACGTAACTGTCGGATTCGTCATTGGTATGGCCGGATGGTTCTACATCTTGTACGAAATTTTTGCGGGCGAAGCCGCCAAAATGGCTGCCGACGAGGCTCCAGAAGCGGTTCAAAGTGCATACGGTACGATGCGTATGGTTGTTACCGTT LLTVPLLMIEFFLILRAIGNASGGIFWRLLIGTLVMLVPGYMGEAGYINVTVGFVIGMAGWFYILYEIFAGEAAKMAADEAPEAVQSAYGTMRMVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTGACCGTCCCACTCTTGATGATCGAGTTCTTCTTGATTCTACGAGCG---------ATT---GGCAATGCATCGGGC---GGCATC------------------------------------TTCTGGCGA---CTCTTGATTGGTACCCTCGTAATGTTGGTTCCAGGCTACATGGGCGAG---------GCT------------------GGT------TAC---------------------------------ATT------------------------------------------------------------------AACGTA------------------ACTGTCGGA---TTCGTCATTGGTATGGCCGGATGGTTCTACATCTTGTACGAAATT---------------TTT------GCG---GGCGAAGCCGCCAAAATGGCTGCCGAC------GAG---GCTCCAGAAGCGGTT---CAA---AGT---GCA---TAC---GGT---ACGATG---CGTATGGTTGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFFLILRA---I-GNASG-GI------------FWR-LLIGTLVMLVPGYMGE---A------G--Y-----------I----------------------NV------TVG-FVIGMAGWFYILYEI-----F--A-GEAAKMAAD--E-APEAV-Q-S-A-Y-G-TM-RMVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-Himb30]_KJ928409 [III-Gamma4-Himb30] PRGD_OTU035a_a188c6e21e2c2f3f5a6c80a3ccbfd88c gb|KJ928409| PRGD_OTU035a_a188c6e21e2c2f3f5a6c80a3ccbfd88c, putative proteorhodopsin gene, partial cds. PRGD_OTU035a_a188c6e21e2c2f3f5a6c80a3ccbfd88c, putative proteorhodopsin gene, partial cds. KJ928409 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Himb30-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Himb30-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTGTTGACCGTGCCGCTGCTGATGATCGAGTTCTTCTTGATTCTCAGAGCAATAGGTAACGCGTCTGGTGGCATCTTCTGGCGCCTCCTCATTGGTACTCTTGTAATGCTTGTTCCCGGATACATGGGTGAAGCAGGCTACATCAACGTGACTGTTGGTTTCGTGATCGGGATGCTGGGCTGGTTCTACATCCTGTATGAAATCTTCGCCGGTGAAGCTGCGCAGATGGCCGCAGAGCAGGCACCCGAAGCAGTCCAGAGTGCCTACGGGACCATGCGTCTGGTTGTTACCGTG LLTVPLLMIEFFLILRAIGNASGGIFWRLLIGTLVMLVPGYMGEAGYINVTVGFVIGMLGWFYILYEIFAGEAAQMAAEQAPEAVQSAYGTMRLVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTGACCGTGCCGCTGCTGATGATCGAGTTCTTCTTGATTCTCAGAGCA---------ATA---GGTAACGCGTCTGGT---GGCATC------------------------------------TTCTGGCGC---CTCCTCATTGGTACTCTTGTAATGCTTGTTCCCGGATACATGGGTGAA---------GCA------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AACGTG------------------ACTGTTGGT---TTCGTGATCGGGATGCTGGGCTGGTTCTACATCCTGTATGAAATC---------------TTC------GCC---GGTGAAGCTGCGCAGATGGCCGCAGAG------CAG---GCACCCGAAGCAGTC---CAG---AGT---GCC---TAC---GGG---ACCATG---CGTCTGGTTGTTACCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFFLILRA---I-GNASG-GI------------FWR-LLIGTLVMLVPGYMGE---A------G--Y-----------I----------------------NV------TVG-FVIGMLGWFYILYEI-----F--A-GEAAQMAAE--Q-APEAV-Q-S-A-Y-G-TM-RLVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-Himb30]_KJ928410 [III-Gamma4-Himb30] PRGD_OTU035a_a49148d061790ac3483ac028d0a8af2b gb|KJ928410| PRGD_OTU035a_a49148d061790ac3483ac028d0a8af2b, putative proteorhodopsin gene, partial cds. PRGD_OTU035a_a49148d061790ac3483ac028d0a8af2b, putative proteorhodopsin gene, partial cds. KJ928410 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Himb30-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Himb30-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTGTTGACCGTACCGCTGCTGATGATCGAGTTCTTCTTGATTCTCAGAGCAATAGGTAACGCGTCTGGTGGCATCTTCTGGCGCCTCCTCATTGGTACTCTTGTAATGCTTGTTCCCGGATACATGGGTGAGGCAGGCTACATCAACGTGACTGTTGGTTTCGTGATCGGGATGCTGGGCTGGTTCTATATCTTGTATGAAATCTTCGCCGGTGAAGCTGCGCAGATGGCCGCAGAGCAGGCACCTGAAGCAGTCCAGAGTGCCTACGGGACCATGCGTCTGGTTGTTACCGTG LLTVPLLMIEFFLILRAIGNASGGIFWRLLIGTLVMLVPGYMGEAGYINVTVGFVIGMLGWFYILYEIFAGEAAQMAAEQAPEAVQSAYGTMRLVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTGACCGTACCGCTGCTGATGATCGAGTTCTTCTTGATTCTCAGAGCA---------ATA---GGTAACGCGTCTGGT---GGCATC------------------------------------TTCTGGCGC---CTCCTCATTGGTACTCTTGTAATGCTTGTTCCCGGATACATGGGTGAG---------GCA------------------GGC------TAC---------------------------------ATC------------------------------------------------------------------AACGTG------------------ACTGTTGGT---TTCGTGATCGGGATGCTGGGCTGGTTCTATATCTTGTATGAAATC---------------TTC------GCC---GGTGAAGCTGCGCAGATGGCCGCAGAG------CAG---GCACCTGAAGCAGTC---CAG---AGT---GCC---TAC---GGG---ACCATG---CGTCTGGTTGTTACCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFFLILRA---I-GNASG-GI------------FWR-LLIGTLVMLVPGYMGE---A------G--Y-----------I----------------------NV------TVG-FVIGMLGWFYILYEI-----F--A-GEAAQMAAE--Q-APEAV-Q-S-A-Y-G-TM-RLVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-Himb30]_KJ929342 [III-Gamma4-Himb30] PRGD_OTU107_819fff25d726ab07028d06c2bd8ecf4f gb|KJ929342| PRGD_OTU107_819fff25d726ab07028d06c2bd8ecf4f, putative proteorhodopsin gene, partial cds. PRGD_OTU107_819fff25d726ab07028d06c2bd8ecf4f, putative proteorhodopsin gene, partial cds. KJ929342 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Himb30-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Himb30-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTTTTGACTGTCCCTCTCCAAATGATCGAATTCTATTTGATCCTAAGGGCCATCGGGGCTGCGCCGGCTGGAATATTCTGGCGTTTGTTCCTTGGTACCTTGGTAATGATCATTCCAGGGTTCCTGGGCGAGGCTGGTTACATTGATGTGACCGTTGGTTTTGTAATTGGGATGCTCGGTTGGGCCTTCATATTGTATGAGTTGTTCGCTGGTGAGGCCTCGAAAAAGGCTGCCGATCAGGCTCCTGCAGCAGTCCAAACTGCCTTCAATACCATGAGATGGATTGTGACTATC LLTVPLQMIEFYLILRAIGAAPAGIFWRLFLGTLVMIIPGFLGEAGYIDVTVGFVIGMLGWAFILYELFAGEASKKAADQAPAAVQTAFNTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTGACTGTCCCTCTCCAAATGATCGAATTCTATTTGATCCTAAGGGCC---------ATC---GGGGCTGCGCCGGCT---GGAATA------------------------------------TTCTGGCGT---TTGTTCCTTGGTACCTTGGTAATGATCATTCCAGGGTTCCTGGGCGAG---------GCT------------------GGT------TAC---------------------------------ATT------------------------------------------------------------------GATGTG------------------ACCGTTGGT---TTTGTAATTGGGATGCTCGGTTGGGCCTTCATATTGTATGAGTTG---------------TTC------GCT---GGTGAGGCCTCGAAAAAGGCTGCCGAT------CAG---GCTCCTGCAGCAGTC---CAA---ACT---GCC---TTC---AAT---ACCATG---AGATGGATTGTGACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMIEFYLILRA---I-GAAPA-GI------------FWR-LFLGTLVMIIPGFLGE---A------G--Y-----------I----------------------DV------TVG-FVIGMLGWAFILYEL-----F--A-GEASKKAAD--Q-APAAV-Q-T-A-F-N-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-Himb30]_KJ929338 [III-Gamma4-Himb30] PRGD_OTU107_otuREP_8d86bfbe87783b56ea0dc88fe997e2f9 gb|KJ929338| PRGD_OTU107_otuREP_8d86bfbe87783b56ea0dc88fe997e2f9, putative proteorhodopsin gene, partial cds. PRGD_OTU107_otuREP_8d86bfbe87783b56ea0dc88fe997e2f9, putative proteorhodopsin gene, partial cds. KJ929338 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Himb30-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Himb30-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTTTTGACTGTTCCTCTCCAAATGATCGAATTCTATTTGATCCTGAGGGCCATCGGGGCTGCGCCGGCTGGAATATTCTGGCGTTTGTTCCTCGGCACCTTGGTAATGATCATTCCAGGGTTCCTGGGCGAGGCTGGTTACATTGATGTGACCGTTGGTTTTGTAATTGGTATGCTCGGTTGGGCCTTCATATTGTATGAGTTGTTCGCTGGTGAGGCCTCGAAAAAGGCCGCCGATCAGGCTCCTGCAGCAGTCCAAACTGCCTTCAATACCATGAGATGGATTGTGACTATC LLTVPLQMIEFYLILRAIGAAPAGIFWRLFLGTLVMIIPGFLGEAGYIDVTVGFVIGMLGWAFILYELFAGEASKKAADQAPAAVQTAFNTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTGACTGTTCCTCTCCAAATGATCGAATTCTATTTGATCCTGAGGGCC---------ATC---GGGGCTGCGCCGGCT---GGAATA------------------------------------TTCTGGCGT---TTGTTCCTCGGCACCTTGGTAATGATCATTCCAGGGTTCCTGGGCGAG---------GCT------------------GGT------TAC---------------------------------ATT------------------------------------------------------------------GATGTG------------------ACCGTTGGT---TTTGTAATTGGTATGCTCGGTTGGGCCTTCATATTGTATGAGTTG---------------TTC------GCT---GGTGAGGCCTCGAAAAAGGCCGCCGAT------CAG---GCTCCTGCAGCAGTC---CAA---ACT---GCC---TTC---AAT---ACCATG---AGATGGATTGTGACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMIEFYLILRA---I-GAAPA-GI------------FWR-LFLGTLVMIIPGFLGE---A------G--Y-----------I----------------------DV------TVG-FVIGMLGWAFILYEL-----F--A-GEASKKAAD--Q-APAAV-Q-T-A-F-N-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-Himb30]_KJ929339 [III-Gamma4-Himb30] PRGD_OTU107_10d290c12ef99ec1ce6ec160e1d92ab5 gb|KJ929339| PRGD_OTU107_10d290c12ef99ec1ce6ec160e1d92ab5, putative proteorhodopsin gene, partial cds. PRGD_OTU107_10d290c12ef99ec1ce6ec160e1d92ab5, putative proteorhodopsin gene, partial cds. KJ929339 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Himb30-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Himb30-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTTTTGACTGTTCCTCTTCAAATGATCGAATTCTATTTGATCCTGAGGGCCATCGGGGCTGCGCCTGCCGGGATATTCTGGCGTTTGTTCCTTGGCACCTTGGTAATGATCATTCCTGGGTTCTTGGGCGAGGCTGGTTACATTGATGTGACCGTTGGTTTTATAATTGGTATGCTTGGTTGGGCCTTCATATTGTATGAGTTGTTCGCTGGTGAGGCCTCGAAAAAGGCCGCCGATCAGGCTCCTGCAGCAGTCCAAACTGCCTTCAATACCATGAGATGGATTGTGACTATC LLTVPLQMIEFYLILRAIGAAPAGIFWRLFLGTLVMIIPGFLGEAGYIDVTVGFIIGMLGWAFILYELFAGEASKKAADQAPAAVQTAFNTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTGACTGTTCCTCTTCAAATGATCGAATTCTATTTGATCCTGAGGGCC---------ATC---GGGGCTGCGCCTGCC---GGGATA------------------------------------TTCTGGCGT---TTGTTCCTTGGCACCTTGGTAATGATCATTCCTGGGTTCTTGGGCGAG---------GCT------------------GGT------TAC---------------------------------ATT------------------------------------------------------------------GATGTG------------------ACCGTTGGT---TTTATAATTGGTATGCTTGGTTGGGCCTTCATATTGTATGAGTTG---------------TTC------GCT---GGTGAGGCCTCGAAAAAGGCCGCCGAT------CAG---GCTCCTGCAGCAGTC---CAA---ACT---GCC---TTC---AAT---ACCATG---AGATGGATTGTGACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMIEFYLILRA---I-GAAPA-GI------------FWR-LFLGTLVMIIPGFLGE---A------G--Y-----------I----------------------DV------TVG-FIIGMLGWAFILYEL-----F--A-GEASKKAAD--Q-APAAV-Q-T-A-F-N-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-Himb30]_KJ929341 [III-Gamma4-Himb30] PRGD_OTU107_5a402d0a725af5facd3f319aa286f3b1 gb|KJ929341| PRGD_OTU107_5a402d0a725af5facd3f319aa286f3b1, putative proteorhodopsin gene, partial cds. PRGD_OTU107_5a402d0a725af5facd3f319aa286f3b1, putative proteorhodopsin gene, partial cds. KJ929341 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Himb30-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Himb30-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTTTTGACTGTTCCTCTTCAAATGATCGAATTCTATTTGATCCTGAGGGCCATCGGGGCTGCGCCGGCTGGGATATTCTGGCGTCTGTTCCTCGGCACCTTGGTAATGATCATTCCAGGGTTCATGGGCGAGGCTGGTTACATTGATGTGACCGTTGGTTTTGTAATTGGTATGCTCGGTTGGTTCTTTATATTGTATGAGTTGTTCGCTGGTGAGGCCTCGAAAAAGGCCGCCGATCAGGCTCCTGCAGCAGTTCAAACAGCCTTCAATACCATGAGATGGATTGTGACTATC LLTVPLQMIEFYLILRAIGAAPAGIFWRLFLGTLVMIIPGFMGEAGYIDVTVGFVIGMLGWFFILYELFAGEASKKAADQAPAAVQTAFNTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTGACTGTTCCTCTTCAAATGATCGAATTCTATTTGATCCTGAGGGCC---------ATC---GGGGCTGCGCCGGCT---GGGATA------------------------------------TTCTGGCGT---CTGTTCCTCGGCACCTTGGTAATGATCATTCCAGGGTTCATGGGCGAG---------GCT------------------GGT------TAC---------------------------------ATT------------------------------------------------------------------GATGTG------------------ACCGTTGGT---TTTGTAATTGGTATGCTCGGTTGGTTCTTTATATTGTATGAGTTG---------------TTC------GCT---GGTGAGGCCTCGAAAAAGGCCGCCGAT------CAG---GCTCCTGCAGCAGTT---CAA---ACA---GCC---TTC---AAT---ACCATG---AGATGGATTGTGACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMIEFYLILRA---I-GAAPA-GI------------FWR-LFLGTLVMIIPGFMGE---A------G--Y-----------I----------------------DV------TVG-FVIGMLGWFFILYEL-----F--A-GEASKKAAD--Q-APAAV-Q-T-A-F-N-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-Himb30]_KJ929343 [III-Gamma4-Himb30] PRGD_OTU107_e0b9539a866e3f5308721650e53008e1 gb|KJ929343| PRGD_OTU107_e0b9539a866e3f5308721650e53008e1, putative proteorhodopsin gene, partial cds. PRGD_OTU107_e0b9539a866e3f5308721650e53008e1, putative proteorhodopsin gene, partial cds. KJ929343 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Himb30-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Himb30-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Arctic Ocean-Atlantic side (73.9992, 19.2097), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTTTTGACTGTTCCTCTCCAAATGATTGAATTCTATTTGATCCTGAGGGCCATCGGGGCTGCGCCGGCTGGGATATTCTGGCGTCTGTTCCTCGGCACCTTGGTAATGATCATTCCAGGGTTCATGGGCGAGGCTGGTTACATTGATGTGACCGTTGGTTTTGTAATTGGTATGCTCGGTTGGTTCTTTATATTGTATGAGTTGTTCGCTGGTGAGGCCTCGAAAAAGGCCGCCGATCAGGCTCCTGCAGCAGTTCAAACAGCCTTCAATACCATGAGATGGATTGTGACTATC LLTVPLQMIEFYLILRAIGAAPAGIFWRLFLGTLVMIIPGFMGEAGYIDVTVGFVIGMLGWFFILYELFAGEASKKAADQAPAAVQTAFNTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTGACTGTTCCTCTCCAAATGATTGAATTCTATTTGATCCTGAGGGCC---------ATC---GGGGCTGCGCCGGCT---GGGATA------------------------------------TTCTGGCGT---CTGTTCCTCGGCACCTTGGTAATGATCATTCCAGGGTTCATGGGCGAG---------GCT------------------GGT------TAC---------------------------------ATT------------------------------------------------------------------GATGTG------------------ACCGTTGGT---TTTGTAATTGGTATGCTCGGTTGGTTCTTTATATTGTATGAGTTG---------------TTC------GCT---GGTGAGGCCTCGAAAAAGGCCGCCGAT------CAG---GCTCCTGCAGCAGTT---CAA---ACA---GCC---TTC---AAT---ACCATG---AGATGGATTGTGACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMIEFYLILRA---I-GAAPA-GI------------FWR-LFLGTLVMIIPGFMGE---A------G--Y-----------I----------------------DV------TVG-FVIGMLGWFFILYEL-----F--A-GEASKKAAD--Q-APAAV-Q-T-A-F-N-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-Himb30]_KJ929340 [III-Gamma4-Himb30] PRGD_OTU107_1753fe4b17b84d30dd45558358acad28 gb|KJ929340| PRGD_OTU107_1753fe4b17b84d30dd45558358acad28, putative proteorhodopsin gene, partial cds. PRGD_OTU107_1753fe4b17b84d30dd45558358acad28, putative proteorhodopsin gene, partial cds. KJ929340 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Himb30-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Himb30-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683) CTTTTAACCGTTCCCCTTCAAATGATCGAATTCTACTTGATATTGAGAGCCATTGGTGCGGCACCGGCTGGTATTTTCTGGCGGTTGTTCCTTGGTACACTAGTAATGATTATTCCAGGGTTCCTGGGCGAGGCTGGTTACATTGATGTGACCGTTGGTTTTGTAATTGGTATGCTCGGTTGGTTCTTTATATTGTATGAGTTGTTCGCTGGTGAGGCCTCGAAAAAGGCCGCCGATCAGGCTCCTGCAGCAGTTCAAACAGCCTTCAATACCATGAGATGGATTGTGACTATC LLTVPLQMIEFYLILRAIGAAPAGIFWRLFLGTLVMIIPGFLGEAGYIDVTVGFVIGMLGWFFILYELFAGEASKKAADQAPAAVQTAFNTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTAACCGTTCCCCTTCAAATGATCGAATTCTACTTGATATTGAGAGCC---------ATT---GGTGCGGCACCGGCT---GGTATT------------------------------------TTCTGGCGG---TTGTTCCTTGGTACACTAGTAATGATTATTCCAGGGTTCCTGGGCGAG---------GCT------------------GGT------TAC---------------------------------ATT------------------------------------------------------------------GATGTG------------------ACCGTTGGT---TTTGTAATTGGTATGCTCGGTTGGTTCTTTATATTGTATGAGTTG---------------TTC------GCT---GGTGAGGCCTCGAAAAAGGCCGCCGAT------CAG---GCTCCTGCAGCAGTT---CAA---ACA---GCC---TTC---AAT---ACCATG---AGATGGATTGTGACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMIEFYLILRA---I-GAAPA-GI------------FWR-LFLGTLVMIIPGFLGE---A------G--Y-----------I----------------------DV------TVG-FVIGMLGWFFILYEL-----F--A-GEASKKAAD--Q-APAAV-Q-T-A-F-N-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-Himb30]_KJ928401 [III-Gamma4-Himb30] PRGD_OTU035a_20b81809e8644a65c028136639bddbfb gb|KJ928401| PRGD_OTU035a_20b81809e8644a65c028136639bddbfb, putative proteorhodopsin gene, partial cds. PRGD_OTU035a_20b81809e8644a65c028136639bddbfb, putative proteorhodopsin gene, partial cds. KJ928401 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Himb30-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Himb30-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) CTGTTAACCGTGCCACTCTTAATGATTGAATTCTTTTTGATTTTAAGAGCTATTGGCGCAGCCTCCGGCGGCATTTTCTGGCGCCTTCTTATTGGTACTCTTGTAATGCTTGTACCTGGTTTCTTGGGCGAAGCCGGATATATGGACAAAACTATTGGATTCGTAATTGGAATGCTCGGTTGGTTCTACATCCTTTACGAGATATTTGCAGGTGAAGCTGGCCAGATGGCGTCGGAAAAGGCGTCGCCAGCTGTTCAAAGTGCATACAACACAATGCGCTGGGTCGTAACGGTG LLTVPLLMIEFFLILRAIGAASGGIFWRLLIGTLVMLVPGFLGEAGYMDKTIGFVIGMLGWFYILYEIFAGEAGQMASEKASPAVQSAYNTMRWVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACCGTGCCACTCTTAATGATTGAATTCTTTTTGATTTTAAGAGCT---------ATT---GGCGCAGCCTCCGGC---GGCATT------------------------------------TTCTGGCGC---CTTCTTATTGGTACTCTTGTAATGCTTGTACCTGGTTTCTTGGGCGAA---------GCC------------------GGA------TAT---------------------------------ATG------------------------------------------------------------------GACAAA------------------ACTATTGGA---TTCGTAATTGGAATGCTCGGTTGGTTCTACATCCTTTACGAGATA---------------TTT------GCA---GGTGAAGCTGGCCAGATGGCGTCGGAA------AAG---GCGTCGCCAGCTGTT---CAA---AGT---GCA---TAC---AAC---ACAATG---CGCTGGGTCGTAACGGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFFLILRA---I-GAASG-GI------------FWR-LLIGTLVMLVPGFLGE---A------G--Y-----------M----------------------DK------TIG-FVIGMLGWFYILYEI-----F--A-GEAGQMASE--K-ASPAV-Q-S-A-Y-N-TM-RWVVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-Himb30]_KJ928397 [III-Gamma4-Himb30] PRGD_OTU035a_002db86c3b7ca74de21148127108ab6e gb|KJ928397| PRGD_OTU035a_002db86c3b7ca74de21148127108ab6e, putative proteorhodopsin gene, partial cds. PRGD_OTU035a_002db86c3b7ca74de21148127108ab6e, putative proteorhodopsin gene, partial cds. KJ928397 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Himb30-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Himb30-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTGTTGACCGTTCCACTCCTGATGATTGAGTTCTTCTTGATTCTCAGAGCGATTGGCAATGCGTCCGGCGGCATTTTCTGGCGCCTCCTCATCGGTACTCTCGTAATGCTAGTACCTGGCTACATGGGTGAAGCGGGTTATATCAACGTAACCGTTGGCTTCGTGATCGGTATGCTCGGATGGTTCTACATCCTGTACGAAATCTTTGCTGGTGAGGCTGCGAAGATGGCGGCAGATCAGGCACCAGAAGCGGTACAAAGCGCCTACGGCACAATGCGGATGGTTGTTACTATC LLTVPLLMIEFFLILRAIGNASGGIFWRLLIGTLVMLVPGYMGEAGYINVTVGFVIGMLGWFYILYEIFAGEAAKMAADQAPEAVQSAYGTMRMVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTGACCGTTCCACTCCTGATGATTGAGTTCTTCTTGATTCTCAGAGCG---------ATT---GGCAATGCGTCCGGC---GGCATT------------------------------------TTCTGGCGC---CTCCTCATCGGTACTCTCGTAATGCTAGTACCTGGCTACATGGGTGAA---------GCG------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------AACGTA------------------ACCGTTGGC---TTCGTGATCGGTATGCTCGGATGGTTCTACATCCTGTACGAAATC---------------TTT------GCT---GGTGAGGCTGCGAAGATGGCGGCAGAT------CAG---GCACCAGAAGCGGTA---CAA---AGC---GCC---TAC---GGC---ACAATG---CGGATGGTTGTTACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFFLILRA---I-GNASG-GI------------FWR-LLIGTLVMLVPGYMGE---A------G--Y-----------I----------------------NV------TVG-FVIGMLGWFYILYEI-----F--A-GEAAKMAAD--Q-APEAV-Q-S-A-Y-G-TM-RMVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-b]_KJ929684 [III-Gamma4-b] PRGD_OTU194_otuREP_09e56ccdef122ebaf9a0e5af7b6ebe4f gb|KJ929684| PRGD_OTU194_otuREP_09e56ccdef122ebaf9a0e5af7b6ebe4f, putative proteorhodopsin gene, partial cds. PRGD_OTU194_otuREP_09e56ccdef122ebaf9a0e5af7b6ebe4f, putative proteorhodopsin gene, partial cds. KJ929684 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419) CTACTCACAGTACCTTTACTCATGATCGAATTCTTCTTGATTCTGCGTGCCATTGGTAACGCATCAGGTGGAATCTTCTGGCGCCTCCTAATCGGCACCTTGGTCATGTTGGTTCCTGGGTATCTCGCTGAAGCCGGTTATATTAGTACAACCCTTGGATTTATTGTTGGTATGCTGGGTTGGTTCTATATCTTGTATGAAATCTTCGCTGGTGAAGCAGGTCAAATGGCTGCCAAAGAAGCATCTCAAGCAGTACAGAGCTCGTATAACTCAATGCGTTGGATTGTGACTATT LLTVPLLMIEFFLILRAIGNASGGIFWRLLIGTLVMLVPGYLAEAGYISTTLGFIVGMLGWFYILYEIFAGEAGQMAAKEASQAVQSSYNSMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTCACAGTACCTTTACTCATGATCGAATTCTTCTTGATTCTGCGTGCC---------ATT---GGTAACGCATCAGGT---GGAATC------------------------------------TTCTGGCGC---CTCCTAATCGGCACCTTGGTCATGTTGGTTCCTGGGTATCTCGCTGAA---------GCC------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------AGTACA------------------ACCCTTGGA---TTTATTGTTGGTATGCTGGGTTGGTTCTATATCTTGTATGAAATC---------------TTC------GCT---GGTGAAGCAGGTCAAATGGCTGCCAAA------GAA---GCATCTCAAGCAGTA---CAG---AGC---TCG---TAT---AAC---TCAATG---CGTTGGATTGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFFLILRA---I-GNASG-GI------------FWR-LLIGTLVMLVPGYLAE---A------G--Y-----------I----------------------ST------TLG-FIVGMLGWFYILYEI-----F--A-GEAGQMAAK--E-ASQAV-Q-S-S-Y-N-SM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-b]_KJ929685 [III-Gamma4-b] PRGD_OTU194_71807ba08a88a646fc7fe188076de4d9 gb|KJ929685| PRGD_OTU194_71807ba08a88a646fc7fe188076de4d9, putative proteorhodopsin gene, partial cds. PRGD_OTU194_71807ba08a88a646fc7fe188076de4d9, putative proteorhodopsin gene, partial cds. KJ929685 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) CTACTTACAGTACCTTTACTCATGATCGAATTCTTCTTGATTCTGCGTGCCATTGGTAACGCGTCAGGTGGAATTTTCTGGCGCCTCCTAATCGGCACCTTGGTCATGTTGATTCCTGGGTATCTGGCTGAAGCCGGTTATATTAGTACAACTCTTGGATTTATTGTTGGTATGTTGGGTTGGTTCTATATCTTGTATGAAATCTTCGCTGGTGAAGCTGGTCAAATGGCTGCCAAAGAAGCATCTCAAGCAGTACAGAGCTCATATAACTCAATGCGTTGGATTGTGACTATT LLTVPLLMIEFFLILRAIGNASGGIFWRLLIGTLVMLIPGYLAEAGYISTTLGFIVGMLGWFYILYEIFAGEAGQMAAKEASQAVQSSYNSMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTTACAGTACCTTTACTCATGATCGAATTCTTCTTGATTCTGCGTGCC---------ATT---GGTAACGCGTCAGGT---GGAATT------------------------------------TTCTGGCGC---CTCCTAATCGGCACCTTGGTCATGTTGATTCCTGGGTATCTGGCTGAA---------GCC------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------AGTACA------------------ACTCTTGGA---TTTATTGTTGGTATGTTGGGTTGGTTCTATATCTTGTATGAAATC---------------TTC------GCT---GGTGAAGCTGGTCAAATGGCTGCCAAA------GAA---GCATCTCAAGCAGTA---CAG---AGC---TCA---TAT---AAC---TCAATG---CGTTGGATTGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFFLILRA---I-GNASG-GI------------FWR-LLIGTLVMLIPGYLAE---A------G--Y-----------I----------------------ST------TLG-FIVGMLGWFYILYEI-----F--A-GEAGQMAAK--E-ASQAV-Q-S-S-Y-N-SM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-b]_KJ928416 [III-Gamma4-b] PRGD_OTU035b_otuREP_5391326a38408f54de09e34e08f9e88e gb|KJ928416| PRGD_OTU035b_otuREP_5391326a38408f54de09e34e08f9e88e, putative proteorhodopsin gene, partial cds. PRGD_OTU035b_otuREP_5391326a38408f54de09e34e08f9e88e, putative proteorhodopsin gene, partial cds. KJ928416 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781), English Channel (48.7717, -3.9683), Mediterranean Sea (33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTGTTAACTGTGCCGCTGTTGATGATCGAGTTCTTCTTGATTCTGCGTGCGATTGGTAATGCGTCTGGCGGTATCTTCTGGCGTCTGTTGATCGGTACCTTCGTAATGCTGGTGCCCGGATACTTGGGTGAGGCGGGATACATCAACGTAACGCTAGGCTTCGTAATCGGGATGTTGGGCTGGTTCTACATTCTGTACGAGATCTTTGCGGGCGAAGCAGCCAAAATGGCGGCAAACGAAGCGCCGGCAGCTGTACAAAGTTCGTACAACACCATGCGTTGGGTCGTCACCATC LLTVPLLMIEFFLILRAIGNASGGIFWRLLIGTFVMLVPGYLGEAGYINVTLGFVIGMLGWFYILYEIFAGEAAKMAANEAPAAVQSSYNTMRWVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACTGTGCCGCTGTTGATGATCGAGTTCTTCTTGATTCTGCGTGCG---------ATT---GGTAATGCGTCTGGC---GGTATC------------------------------------TTCTGGCGT---CTGTTGATCGGTACCTTCGTAATGCTGGTGCCCGGATACTTGGGTGAG---------GCG------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGTA------------------ACGCTAGGC---TTCGTAATCGGGATGTTGGGCTGGTTCTACATTCTGTACGAGATC---------------TTT------GCG---GGCGAAGCAGCCAAAATGGCGGCAAAC------GAA---GCGCCGGCAGCTGTA---CAA---AGT---TCG---TAC---AAC---ACCATG---CGTTGGGTCGTCACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFFLILRA---I-GNASG-GI------------FWR-LLIGTFVMLVPGYLGE---A------G--Y-----------I----------------------NV------TLG-FVIGMLGWFYILYEI-----F--A-GEAAKMAAN--E-APAAV-Q-S-S-Y-N-TM-RWVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-b]_KJ928418 [III-Gamma4-b] PRGD_OTU035b_8ba09330dc1179308c7633a586765d1f gb|KJ928418| PRGD_OTU035b_8ba09330dc1179308c7633a586765d1f, putative proteorhodopsin gene, partial cds. PRGD_OTU035b_8ba09330dc1179308c7633a586765d1f, putative proteorhodopsin gene, partial cds. KJ928418 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGTTAACTGTGCCGCTGTTGATGATCGAGTTCTTCTTGATTCTGCGTGCGATTGGTAATGCTTCTGGCGGTATCTTCTGGCGTCTGTTGATCGGTACCTTCGTAATGCTGGTGCCCGGATACTTGGGTGAAGCGGGATACATCAACGTAACGCTAGGCTTCGTAATCGGGATGTTGGGCTGGTTCTACATTCTGTACGAGATCTTTGCGGGCGAAGCAGCCAAAATGGCGGCAAACGAAGCGCCGGCAGCTGTACAAAGTTCGTACAACACCATGCGTTGGGTCGTCACCATC LLTVPLLMIEFFLILRAIGNASGGIFWRLLIGTFVMLVPGYLGEAGYINVTLGFVIGMLGWFYILYEIFAGEAAKMAANEAPAAVQSSYNTMRWVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACTGTGCCGCTGTTGATGATCGAGTTCTTCTTGATTCTGCGTGCG---------ATT---GGTAATGCTTCTGGC---GGTATC------------------------------------TTCTGGCGT---CTGTTGATCGGTACCTTCGTAATGCTGGTGCCCGGATACTTGGGTGAA---------GCG------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGTA------------------ACGCTAGGC---TTCGTAATCGGGATGTTGGGCTGGTTCTACATTCTGTACGAGATC---------------TTT------GCG---GGCGAAGCAGCCAAAATGGCGGCAAAC------GAA---GCGCCGGCAGCTGTA---CAA---AGT---TCG---TAC---AAC---ACCATG---CGTTGGGTCGTCACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFFLILRA---I-GNASG-GI------------FWR-LLIGTFVMLVPGYLGE---A------G--Y-----------I----------------------NV------TLG-FVIGMLGWFYILYEI-----F--A-GEAAKMAAN--E-APAAV-Q-S-S-Y-N-TM-RWVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-b]_KJ928421 [III-Gamma4-b] PRGD_OTU035b_ec2104aea24878e0cb4815b5e70fabce gb|KJ928421| PRGD_OTU035b_ec2104aea24878e0cb4815b5e70fabce, putative proteorhodopsin gene, partial cds. PRGD_OTU035b_ec2104aea24878e0cb4815b5e70fabce, putative proteorhodopsin gene, partial cds. KJ928421 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; ; ; 67.49, -168.12), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -33.28, 45.35) CTGTTAACTGTGCCGCTGTTGATGATCGAGTTCTTCTTGATTCTGCGTGCGATCGGCAATGCGTCTGGCGGTATCTTCTGGCGTCTGTTGATCGGTACCTTCGTAATGCTGGTGCCCGGATACTTGGGTGAGGCGGGATACATCAACGTAACGCTAGGCTTCGTAATCGGGATGTTGGGCTGGTTCTACATTCTGTACGAGATCTTTGCGGGCGAAGCAGCCAAAATGGCGGCAAACGAAGCGCCGGCAGCTGTACAAAGTTCGTACAACACCATGCGTTGGGTCGTCACCATC LLTVPLLMIEFFLILRAIGNASGGIFWRLLIGTFVMLVPGYLGEAGYINVTLGFVIGMLGWFYILYEIFAGEAAKMAANEAPAAVQSSYNTMRWVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACTGTGCCGCTGTTGATGATCGAGTTCTTCTTGATTCTGCGTGCG---------ATC---GGCAATGCGTCTGGC---GGTATC------------------------------------TTCTGGCGT---CTGTTGATCGGTACCTTCGTAATGCTGGTGCCCGGATACTTGGGTGAG---------GCG------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGTA------------------ACGCTAGGC---TTCGTAATCGGGATGTTGGGCTGGTTCTACATTCTGTACGAGATC---------------TTT------GCG---GGCGAAGCAGCCAAAATGGCGGCAAAC------GAA---GCGCCGGCAGCTGTA---CAA---AGT---TCG---TAC---AAC---ACCATG---CGTTGGGTCGTCACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFFLILRA---I-GNASG-GI------------FWR-LLIGTFVMLVPGYLGE---A------G--Y-----------I----------------------NV------TLG-FVIGMLGWFYILYEI-----F--A-GEAAKMAAN--E-APAAV-Q-S-S-Y-N-TM-RWVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-b]_KJ928419 [III-Gamma4-b] PRGD_OTU035b_9610eb08a1fc748d0e0239a0fdd69da8 gb|KJ928419| PRGD_OTU035b_9610eb08a1fc748d0e0239a0fdd69da8, putative proteorhodopsin gene, partial cds. PRGD_OTU035b_9610eb08a1fc748d0e0239a0fdd69da8, putative proteorhodopsin gene, partial cds. KJ928419 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; ; 67.49, -168.12), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) CTGCTTACTGTTCCGCTGTTGATGATTGAGTTCTTCTTGATCTTGCGAGCTATCGGCAATGCGCCTGGCGGCATTTTCTGGCGTCTCCTCATTGGTTCACTGGTCATGCTAGTTCCAGGATTTCTTGGAGAAGCTGGATACATCAACGTAACGTTAGGCTTTGTAATTGGTATGCTCGGATGGTTCTACATATTGTATGAAATATTTGCCGGTGAAGCTGGTCAGATGGCAGCCGAACAAGCGCCTCCTGCTGTACAAAGTGCGTATGGAACGATGCGATGGGTAGTGACGATC LLTVPLLMIEFFLILRAIGNAPGGIFWRLLIGSLVMLVPGFLGEAGYINVTLGFVIGMLGWFYILYEIFAGEAGQMAAEQAPPAVQSAYGTMRWVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTTACTGTTCCGCTGTTGATGATTGAGTTCTTCTTGATCTTGCGAGCT---------ATC---GGCAATGCGCCTGGC---GGCATT------------------------------------TTCTGGCGT---CTCCTCATTGGTTCACTGGTCATGCTAGTTCCAGGATTTCTTGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGTA------------------ACGTTAGGC---TTTGTAATTGGTATGCTCGGATGGTTCTACATATTGTATGAAATA---------------TTT------GCC---GGTGAAGCTGGTCAGATGGCAGCCGAA------CAA---GCGCCTCCTGCTGTA---CAA---AGT---GCG---TAT---GGA---ACGATG---CGATGGGTAGTGACGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFFLILRA---I-GNAPG-GI------------FWR-LLIGSLVMLVPGFLGE---A------G--Y-----------I----------------------NV------TLG-FVIGMLGWFYILYEI-----F--A-GEAGQMAAE--Q-APPAV-Q-S-A-Y-G-TM-RWVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-b]_KJ928420 [III-Gamma4-b] PRGD_OTU035b_973f39776b37efc4a3312eee70b5a761 gb|KJ928420| PRGD_OTU035b_973f39776b37efc4a3312eee70b5a761, putative proteorhodopsin gene, partial cds. PRGD_OTU035b_973f39776b37efc4a3312eee70b5a761, putative proteorhodopsin gene, partial cds. KJ928420 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833) CTGCTTACTGTTCCGTTGTTGATGATTGAGTTCTTCTTGATCTTGCGAGCTATCGGCAATGCGCCTGGCGGCATTTTCTGGCGTCTCCTCATTGGTTCACTGGTCATGCTAGTTCCAGGATTTCTCGGAGAAGCTGGATACATCAACGTAACGTTAGGCTTTGTAATTGGTATGCTCGGATGGTTCTACATATTGTATGAAATATTTGCCGGTGAAGCTGGTCAGATGGCAGCCGAACAAGCGCCGCCTGCTGTACAAAGCGCGTATGGAACGATGCGATGGGTAGTGACGATC LLTVPLLMIEFFLILRAIGNAPGGIFWRLLIGSLVMLVPGFLGEAGYINVTLGFVIGMLGWFYILYEIFAGEAGQMAAEQAPPAVQSAYGTMRWVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTTACTGTTCCGTTGTTGATGATTGAGTTCTTCTTGATCTTGCGAGCT---------ATC---GGCAATGCGCCTGGC---GGCATT------------------------------------TTCTGGCGT---CTCCTCATTGGTTCACTGGTCATGCTAGTTCCAGGATTTCTCGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGTA------------------ACGTTAGGC---TTTGTAATTGGTATGCTCGGATGGTTCTACATATTGTATGAAATA---------------TTT------GCC---GGTGAAGCTGGTCAGATGGCAGCCGAA------CAA---GCGCCGCCTGCTGTA---CAA---AGC---GCG---TAT---GGA---ACGATG---CGATGGGTAGTGACGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFFLILRA---I-GNAPG-GI------------FWR-LLIGSLVMLVPGFLGE---A------G--Y-----------I----------------------NV------TLG-FVIGMLGWFYILYEI-----F--A-GEAGQMAAE--Q-APPAV-Q-S-A-Y-G-TM-RWVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-b]_KJ928417 [III-Gamma4-b] PRGD_OTU035b_806e62190ef5b9f05c592f1020993c51 gb|KJ928417| PRGD_OTU035b_806e62190ef5b9f05c592f1020993c51, putative proteorhodopsin gene, partial cds. PRGD_OTU035b_806e62190ef5b9f05c592f1020993c51, putative proteorhodopsin gene, partial cds. KJ928417 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/B subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; ; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) CTGCTTACTGTTCCGTTACTGATGATTGAGTTCTTCTTGATTTTGCGAGCTATCGGCAATGCGCCTGGCGGCATTTTCTGGCGTCTCCTCATTGGTTCACTAGTCATGCTAGTTCCAGGATTTCTCGGAGAAGCTGGATACATCAACGTAACGTTAGGTTTTGTAATTGGCATGCTCGGATGGTTCTACATATTGTATGAAATATTTGCCGGTGAAGCTGGTCAGATGGCAGCCGAACAAGCGCCGCCTGCTGTACAAAGCGCGTATGGAACGATGCGATGGGTAGTAACGATC LLTVPLLMIEFFLILRAIGNAPGGIFWRLLIGSLVMLVPGFLGEAGYINVTLGFVIGMLGWFYILYEIFAGEAGQMAAEQAPPAVQSAYGTMRWVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTTACTGTTCCGTTACTGATGATTGAGTTCTTCTTGATTTTGCGAGCT---------ATC---GGCAATGCGCCTGGC---GGCATT------------------------------------TTCTGGCGT---CTCCTCATTGGTTCACTAGTCATGCTAGTTCCAGGATTTCTCGGAGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACGTA------------------ACGTTAGGT---TTTGTAATTGGCATGCTCGGATGGTTCTACATATTGTATGAAATA---------------TTT------GCC---GGTGAAGCTGGTCAGATGGCAGCCGAA------CAA---GCGCCGCCTGCTGTA---CAA---AGC---GCG---TAT---GGA---ACGATG---CGATGGGTAGTAACGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFFLILRA---I-GNAPG-GI------------FWR-LLIGSLVMLVPGFLGE---A------G--Y-----------I----------------------NV------TLG-FVIGMLGWFYILYEI-----F--A-GEAGQMAAE--Q-APPAV-Q-S-A-Y-G-TM-RWVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-a]_KJ928440 [III-Gamma4-a] PRGD_OTU036_d66beefa0cb24d4700c612211e5f5592 gb|KJ928440| PRGD_OTU036_d66beefa0cb24d4700c612211e5f5592, putative proteorhodopsin gene, partial cds. PRGD_OTU036_d66beefa0cb24d4700c612211e5f5592, putative proteorhodopsin gene, partial cds. KJ928440 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175; 33.935, 18.508) CTGTTGACCGTTCCACTTCAAATGATTGAGTTCTATCTGATACTTGCTGCCATCGGTTTGGCATCAGCTGGAATGTTCTGGAGATTATTGATCGGCACAATGATCATGTTGGTTGCTGGTTTTATGGGCGAAGCTAAGTATATCGATACTACAGTCGGATTTATCATAGGAATGCTGGGATGGTTCTACATTCTGTATGAAATTTTTGCTGGCGATGCGGGAAAACAGGCGGGACAAGCCTCAGCTGCAGTCCAGAGTGCATTTGGAAATATGCGCTTAGTGGTCACTATC LLTVPLQMIEFYLILAAIGLASAGMFWRLLIGTMIMLVAGFMGEAKYIDTTVGFIIGMLGWFYILYEIFAGDAGKQAGQASAAVQSAFGNMRLVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTGACCGTTCCACTTCAAATGATTGAGTTCTATCTGATACTTGCTGCC---------ATC---GGTTTGGCATCAGCT---GGAATG------------------------------------TTCTGGAGA---TTATTGATCGGCACAATGATCATGTTGGTTGCTGGTTTTATGGGCGAA---------GCT------------------AAG------TAT---------------------------------ATC------------------------------------------------------------------GATACT------------------ACAGTCGGA---TTTATCATAGGAATGCTGGGATGGTTCTACATTCTGTATGAAATT---------------TTT------GCT---GGCGATGCGGGAAAA---CAGGCGGGA------CAA---GCCTCAGCTGCAGTC---CAG---AGT---GCA---TTT---GGA---AATATG---CGCTTAGTGGTCACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMIEFYLILAA---I-GLASA-GM------------FWR-LLIGTMIMLVAGFMGE---A------K--Y-----------I----------------------DT------TVG-FIIGMLGWFYILYEI-----F--A-GDAGK-QAG--Q-ASAAV-Q-S-A-F-G-NM-RLVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-a]_KJ928426 [III-Gamma4-a] PRGD_OTU036_506aedf3f0538b538ca8422ab19ed41c gb|KJ928426| PRGD_OTU036_506aedf3f0538b538ca8422ab19ed41c, putative proteorhodopsin gene, partial cds. PRGD_OTU036_506aedf3f0538b538ca8422ab19ed41c, putative proteorhodopsin gene, partial cds. KJ928426 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTGTTGACCGTTCCACTTCAAATGATTGAGTTCTATCTGATACTTGCTGCCATCGGTTTGGCATCAGCTGGAATGTTCTGGAGACTATTGATCGGCACAATGATCATGTTGGTTGCTGGTTTTATGGGCGAAGCTGGTTATATCGATGCTACAGTCGGATTTATCATAGGAATGCTGGGATGGTTCTACATTCTGTATGAAATTTTTGCTGGCGATGCGGGAAAACAGGCGGGACAAGCCTCAGCTGCAGTCCAGAGTGCATTTGGAAATATGCGCTTAGTGGTCACTATC LLTVPLQMIEFYLILAAIGLASAGMFWRLLIGTMIMLVAGFMGEAGYIDATVGFIIGMLGWFYILYEIFAGDAGKQAGQASAAVQSAFGNMRLVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTGACCGTTCCACTTCAAATGATTGAGTTCTATCTGATACTTGCTGCC---------ATC---GGTTTGGCATCAGCT---GGAATG------------------------------------TTCTGGAGA---CTATTGATCGGCACAATGATCATGTTGGTTGCTGGTTTTATGGGCGAA---------GCT------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------GATGCT------------------ACAGTCGGA---TTTATCATAGGAATGCTGGGATGGTTCTACATTCTGTATGAAATT---------------TTT------GCT---GGCGATGCGGGAAAA---CAGGCGGGA------CAA---GCCTCAGCTGCAGTC---CAG---AGT---GCA---TTT---GGA---AATATG---CGCTTAGTGGTCACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMIEFYLILAA---I-GLASA-GM------------FWR-LLIGTMIMLVAGFMGE---A------G--Y-----------I----------------------DA------TVG-FIIGMLGWFYILYEI-----F--A-GDAGK-QAG--Q-ASAAV-Q-S-A-F-G-NM-RLVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-a]_KJ928428 [III-Gamma4-a] PRGD_OTU036_5fa3e23745212c10da4cba9eb96f340a gb|KJ928428| PRGD_OTU036_5fa3e23745212c10da4cba9eb96f340a, putative proteorhodopsin gene, partial cds. PRGD_OTU036_5fa3e23745212c10da4cba9eb96f340a, putative proteorhodopsin gene, partial cds. KJ928428 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.935 18.508 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTGTTGACCGTTCCACTTCAAATGATTGAGTTCTATCTGATACTTGCTGCCATCGGTTTGGCATCAGCTGGAATGTTCTGGAGACTATTGATCGGCACAATGATCATGTTGGTTGCTGGTTTTATGGGCGAAGCTGGTTATATCGATGCTACCGTCGGATTTGTCATAGGAATGCTGGGATGGTTCTACATTCTGTATGAAATTTTTGCTGGCGATGCGGGAAAACAGGCGGGACAAGCCTCGGCTGCAGTCCAGAGTGCATTTGGAAACATGCGCTTAGTGGTCACTATC LLTVPLQMIEFYLILAAIGLASAGMFWRLLIGTMIMLVAGFMGEAGYIDATVGFVIGMLGWFYILYEIFAGDAGKQAGQASAAVQSAFGNMRLVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTGACCGTTCCACTTCAAATGATTGAGTTCTATCTGATACTTGCTGCC---------ATC---GGTTTGGCATCAGCT---GGAATG------------------------------------TTCTGGAGA---CTATTGATCGGCACAATGATCATGTTGGTTGCTGGTTTTATGGGCGAA---------GCT------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------GATGCT------------------ACCGTCGGA---TTTGTCATAGGAATGCTGGGATGGTTCTACATTCTGTATGAAATT---------------TTT------GCT---GGCGATGCGGGAAAA---CAGGCGGGA------CAA---GCCTCGGCTGCAGTC---CAG---AGT---GCA---TTT---GGA---AACATG---CGCTTAGTGGTCACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMIEFYLILAA---I-GLASA-GM------------FWR-LLIGTMIMLVAGFMGE---A------G--Y-----------I----------------------DA------TVG-FVIGMLGWFYILYEI-----F--A-GDAGK-QAG--Q-ASAAV-Q-S-A-F-G-NM-RLVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-a]_KJ928436 [III-Gamma4-a] PRGD_OTU036_a7a15b2275177f648a13d74f33c87223 gb|KJ928436| PRGD_OTU036_a7a15b2275177f648a13d74f33c87223, putative proteorhodopsin gene, partial cds. PRGD_OTU036_a7a15b2275177f648a13d74f33c87223, putative proteorhodopsin gene, partial cds. KJ928436 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.935 18.508 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) CTGTTGACCGTTCCACTTCAAATGATTGAGTTCTATCTGATACTTGCTGCCATCGGTTTGGCATCAGCTGGAATGTTCTGGAGACTATTGATCGGCACAATGATCATGTTGGTTGCTGGTTTTATGGGCGAAGCTGGTTATATTGATGCTACAGTCGGATTTGTCATTGGAATGCTGGGATGGTTCTACATTCTGTATGAAATTTTTGCTGGCGATGCGGGAAAACAGGCGGGACAAGCCTCGGCTGCAGTCCAGAGTGCATTTGGAAACATGCGCTTAGTGGTCACTATC LLTVPLQMIEFYLILAAIGLASAGMFWRLLIGTMIMLVAGFMGEAGYIDATVGFVIGMLGWFYILYEIFAGDAGKQAGQASAAVQSAFGNMRLVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTGACCGTTCCACTTCAAATGATTGAGTTCTATCTGATACTTGCTGCC---------ATC---GGTTTGGCATCAGCT---GGAATG------------------------------------TTCTGGAGA---CTATTGATCGGCACAATGATCATGTTGGTTGCTGGTTTTATGGGCGAA---------GCT------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------GATGCT------------------ACAGTCGGA---TTTGTCATTGGAATGCTGGGATGGTTCTACATTCTGTATGAAATT---------------TTT------GCT---GGCGATGCGGGAAAA---CAGGCGGGA------CAA---GCCTCGGCTGCAGTC---CAG---AGT---GCA---TTT---GGA---AACATG---CGCTTAGTGGTCACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMIEFYLILAA---I-GLASA-GM------------FWR-LLIGTMIMLVAGFMGE---A------G--Y-----------I----------------------DA------TVG-FVIGMLGWFYILYEI-----F--A-GDAGK-QAG--Q-ASAAV-Q-S-A-F-G-NM-RLVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-a]_KJ928423 [III-Gamma4-a] PRGD_OTU036_040f3f2daf5732b9db0466282d9c8dc3 gb|KJ928423| PRGD_OTU036_040f3f2daf5732b9db0466282d9c8dc3, putative proteorhodopsin gene, partial cds. PRGD_OTU036_040f3f2daf5732b9db0466282d9c8dc3, putative proteorhodopsin gene, partial cds. KJ928423 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637; -33.9602, -73.3769), Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGTTGACCGTTCCACTTCAGATGATTGAGTTCTATCTGATACTTGCTGCCATCGGTTTGGCGTCAGCTGGAATGTTCTGGAGACTATTGATCGGCACAATGATCATGTTGGTTGCTGGTTTTATGGGCGAAGCTGGTTATATCGACGCTACAGTCGGATTTGTCATAGGAATTCTGGGATGGTTCTACATTCTGTATGAAATTTTTGCTGGCGACGCCGGAAAACAGGCGGGACAAGCCTCAGATGCAATCCAGAGTGCATTTGGAAATATGCGCTTAGTGGTCACTATT LLTVPLQMIEFYLILAAIGLASAGMFWRLLIGTMIMLVAGFMGEAGYIDATVGFVIGILGWFYILYEIFAGDAGKQAGQASDAIQSAFGNMRLVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTGACCGTTCCACTTCAGATGATTGAGTTCTATCTGATACTTGCTGCC---------ATC---GGTTTGGCGTCAGCT---GGAATG------------------------------------TTCTGGAGA---CTATTGATCGGCACAATGATCATGTTGGTTGCTGGTTTTATGGGCGAA---------GCT------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------GACGCT------------------ACAGTCGGA---TTTGTCATAGGAATTCTGGGATGGTTCTACATTCTGTATGAAATT---------------TTT------GCT---GGCGACGCCGGAAAA---CAGGCGGGA------CAA---GCCTCAGATGCAATC---CAG---AGT---GCA---TTT---GGA---AATATG---CGCTTAGTGGTCACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMIEFYLILAA---I-GLASA-GM------------FWR-LLIGTMIMLVAGFMGE---A------G--Y-----------I----------------------DA------TVG-FVIGILGWFYILYEI-----F--A-GDAGK-QAG--Q-ASDAI-Q-S-A-F-G-NM-RLVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-a]_KJ928438 [III-Gamma4-a] PRGD_OTU036_b322f1465b636dd90f04dcc383dc1dd9 gb|KJ928438| PRGD_OTU036_b322f1465b636dd90f04dcc383dc1dd9, putative proteorhodopsin gene, partial cds. PRGD_OTU036_b322f1465b636dd90f04dcc383dc1dd9, putative proteorhodopsin gene, partial cds. KJ928438 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGTTGACCGTTCCGCTTCAGATGATTGAGTTCTATCTGATACTTGCTGCCATCGGTTTGGCGTCAGCTGGAATGTTCTGGAGACTATTGATCGGAACAATGATCATGTTGGTTGCTGGTTTTATGGGCGAAGCTGGTTATATCGACGCTACAGTCGGATTTGTCATAGGAATTCTGGGATGGTTCTACATTCTGTATGAAATTTTTGCTGGCGACGCCGGAAAACAGGCGGGACAAGCCTCAGAGGCAATCCAGAGTGCATTTGGAAATATGCGCTTAGTGGTCACTATT LLTVPLQMIEFYLILAAIGLASAGMFWRLLIGTMIMLVAGFMGEAGYIDATVGFVIGILGWFYILYEIFAGDAGKQAGQASEAIQSAFGNMRLVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTGACCGTTCCGCTTCAGATGATTGAGTTCTATCTGATACTTGCTGCC---------ATC---GGTTTGGCGTCAGCT---GGAATG------------------------------------TTCTGGAGA---CTATTGATCGGAACAATGATCATGTTGGTTGCTGGTTTTATGGGCGAA---------GCT------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------GACGCT------------------ACAGTCGGA---TTTGTCATAGGAATTCTGGGATGGTTCTACATTCTGTATGAAATT---------------TTT------GCT---GGCGACGCCGGAAAA---CAGGCGGGA------CAA---GCCTCAGAGGCAATC---CAG---AGT---GCA---TTT---GGA---AATATG---CGCTTAGTGGTCACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMIEFYLILAA---I-GLASA-GM------------FWR-LLIGTMIMLVAGFMGE---A------G--Y-----------I----------------------DA------TVG-FVIGILGWFYILYEI-----F--A-GDAGK-QAG--Q-ASEAI-Q-S-A-F-G-NM-RLVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-a]_KJ928432 [III-Gamma4-a] PRGD_OTU036_756ec7b25d7c0c8c9279c58049248c40 gb|KJ928432| PRGD_OTU036_756ec7b25d7c0c8c9279c58049248c40, putative proteorhodopsin gene, partial cds. PRGD_OTU036_756ec7b25d7c0c8c9279c58049248c40, putative proteorhodopsin gene, partial cds. KJ928432 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-33.28, 45.35) TTGTTGACCGTTCCACTTCAGATGATTGAGTTCTATCTGATACTTGCTGCCATCGGTTTGGCGTCAGCTGGAATGTTCTGGAGACTATTGATCGGCACAATGATCATGTTGGTTGCTGGTTTTATGGGCGAAGCTGGTTATATCGACGCTACAGTCGGATTTGTCATCGGAATTCTGGGATGGTTCTACATTCTGTACGAAATTTTTGCTGGCGACGCCGGAAAACAGGCGGGACAAGCCTCAGACGCAATCCAGAGTGCATTTGGAAATATGCGCCTAGTGGTCACTATT LLTVPLQMIEFYLILAAIGLASAGMFWRLLIGTMIMLVAGFMGEAGYIDATVGFVIGILGWFYILYEIFAGDAGKQAGQASDAIQSAFGNMRLVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTGACCGTTCCACTTCAGATGATTGAGTTCTATCTGATACTTGCTGCC---------ATC---GGTTTGGCGTCAGCT---GGAATG------------------------------------TTCTGGAGA---CTATTGATCGGCACAATGATCATGTTGGTTGCTGGTTTTATGGGCGAA---------GCT------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------GACGCT------------------ACAGTCGGA---TTTGTCATCGGAATTCTGGGATGGTTCTACATTCTGTACGAAATT---------------TTT------GCT---GGCGACGCCGGAAAA---CAGGCGGGA------CAA---GCCTCAGACGCAATC---CAG---AGT---GCA---TTT---GGA---AATATG---CGCCTAGTGGTCACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMIEFYLILAA---I-GLASA-GM------------FWR-LLIGTMIMLVAGFMGE---A------G--Y-----------I----------------------DA------TVG-FVIGILGWFYILYEI-----F--A-GDAGK-QAG--Q-ASDAI-Q-S-A-F-G-NM-RLVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-a]_KJ928433 [III-Gamma4-a] PRGD_OTU036_81d67f665f9e475bd0d4ab77afa80c8d gb|KJ928433| PRGD_OTU036_81d67f665f9e475bd0d4ab77afa80c8d, putative proteorhodopsin gene, partial cds. PRGD_OTU036_81d67f665f9e475bd0d4ab77afa80c8d, putative proteorhodopsin gene, partial cds. KJ928433 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTGTTGACCGTTCCACTTCAGATGATTGAGTTCTATCTGATACTTGCTGCCATCGGTTTGGCGTCAGCTGGAATGTTCTGGAGACTATTGATCGGCACAATGATCATGTTGGTTGCTGGTTTTATGGGCGAAGCTGGTTATATCGACGCTACAGTCGGATTTGTTATAGGAATTCTGGGATGGTTCTACATTCTGTATGAAATTTTTGCTGGCGACGCTGGAAAACAGGCGGGACAAGCCTCAGCTGCAATCCAGAGTGCATTTGGAAATATGCGCTTAGTGGTGACTATT LLTVPLQMIEFYLILAAIGLASAGMFWRLLIGTMIMLVAGFMGEAGYIDATVGFVIGILGWFYILYEIFAGDAGKQAGQASAAIQSAFGNMRLVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTGACCGTTCCACTTCAGATGATTGAGTTCTATCTGATACTTGCTGCC---------ATC---GGTTTGGCGTCAGCT---GGAATG------------------------------------TTCTGGAGA---CTATTGATCGGCACAATGATCATGTTGGTTGCTGGTTTTATGGGCGAA---------GCT------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------GACGCT------------------ACAGTCGGA---TTTGTTATAGGAATTCTGGGATGGTTCTACATTCTGTATGAAATT---------------TTT------GCT---GGCGACGCTGGAAAA---CAGGCGGGA------CAA---GCCTCAGCTGCAATC---CAG---AGT---GCA---TTT---GGA---AATATG---CGCTTAGTGGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMIEFYLILAA---I-GLASA-GM------------FWR-LLIGTMIMLVAGFMGE---A------G--Y-----------I----------------------DA------TVG-FVIGILGWFYILYEI-----F--A-GDAGK-QAG--Q-ASAAI-Q-S-A-F-G-NM-RLVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-a]_KJ928441 [III-Gamma4-a] PRGD_OTU036_d84286197de46b34ef0c09b285ed70e3 gb|KJ928441| PRGD_OTU036_d84286197de46b34ef0c09b285ed70e3, putative proteorhodopsin gene, partial cds. PRGD_OTU036_d84286197de46b34ef0c09b285ed70e3, putative proteorhodopsin gene, partial cds. KJ928441 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -33.28, 45.35) TTGTTGACCGTTCCACTTCAGATGATTGAGTTTTATCTGATACTTGCCGCCATCGGTTTGGCGTCAGCTGGAATGTTCTGGAGACTATTGATCGGCACGATGATCATGTTGGTTGCTGGTTTTATGGGCGAAGCTGGTTATATCGACGCTACAGTCGGATTTGTCATAGGAATTCTGGGATGGTTCTACATTCTGTATGAAATTTTTGCTGGCGACGCCGGAAAACAAGCGGGACAAGCCTCAGCTGCAATCCAGAGTGCGTTTGGGAATATGCGCTTAGTGGTCACCATT LLTVPLQMIEFYLILAAIGLASAGMFWRLLIGTMIMLVAGFMGEAGYIDATVGFVIGILGWFYILYEIFAGDAGKQAGQASAAIQSAFGNMRLVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTGACCGTTCCACTTCAGATGATTGAGTTTTATCTGATACTTGCCGCC---------ATC---GGTTTGGCGTCAGCT---GGAATG------------------------------------TTCTGGAGA---CTATTGATCGGCACGATGATCATGTTGGTTGCTGGTTTTATGGGCGAA---------GCT------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------GACGCT------------------ACAGTCGGA---TTTGTCATAGGAATTCTGGGATGGTTCTACATTCTGTATGAAATT---------------TTT------GCT---GGCGACGCCGGAAAA---CAAGCGGGA------CAA---GCCTCAGCTGCAATC---CAG---AGT---GCG---TTT---GGG---AATATG---CGCTTAGTGGTCACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMIEFYLILAA---I-GLASA-GM------------FWR-LLIGTMIMLVAGFMGE---A------G--Y-----------I----------------------DA------TVG-FVIGILGWFYILYEI-----F--A-GDAGK-QAG--Q-ASAAI-Q-S-A-F-G-NM-RLVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-a]_KJ928427 [III-Gamma4-a] PRGD_OTU036_525e36d076cf1058c897d12615d683f6 gb|KJ928427| PRGD_OTU036_525e36d076cf1058c897d12615d683f6, putative proteorhodopsin gene, partial cds. PRGD_OTU036_525e36d076cf1058c897d12615d683f6, putative proteorhodopsin gene, partial cds. KJ928427 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) TTGTTGACCGTTCCACTTCAGATGATTGAGTTCTATCTGATACTTGCCGCCATCGGTTTGGCATCAGCTGGAATGTTCTGGAGACTATTGATCGGCACAATGATCATGTTGGTTGCTGGTTTTATGGGCGAAGCTGGTTATATCGACGCTACGGTCGGATTTGTCATAGGAATTCTGGGATGGTTCTACATTCTGTATGAGATTTTTGCTGGCGACGCCGGAAAACAGGCGGGACAAGCCTCAGCTGCAATCCAGAGTGCATTTGGAAATATGCGCTTAGTGGTCACTATT LLTVPLQMIEFYLILAAIGLASAGMFWRLLIGTMIMLVAGFMGEAGYIDATVGFVIGILGWFYILYEIFAGDAGKQAGQASAAIQSAFGNMRLVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTGACCGTTCCACTTCAGATGATTGAGTTCTATCTGATACTTGCCGCC---------ATC---GGTTTGGCATCAGCT---GGAATG------------------------------------TTCTGGAGA---CTATTGATCGGCACAATGATCATGTTGGTTGCTGGTTTTATGGGCGAA---------GCT------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------GACGCT------------------ACGGTCGGA---TTTGTCATAGGAATTCTGGGATGGTTCTACATTCTGTATGAGATT---------------TTT------GCT---GGCGACGCCGGAAAA---CAGGCGGGA------CAA---GCCTCAGCTGCAATC---CAG---AGT---GCA---TTT---GGA---AATATG---CGCTTAGTGGTCACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMIEFYLILAA---I-GLASA-GM------------FWR-LLIGTMIMLVAGFMGE---A------G--Y-----------I----------------------DA------TVG-FVIGILGWFYILYEI-----F--A-GDAGK-QAG--Q-ASAAI-Q-S-A-F-G-NM-RLVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-a]_KJ928437 [III-Gamma4-a] PRGD_OTU036_a977e0670e0a421358ebe5faa8e8630e gb|KJ928437| PRGD_OTU036_a977e0670e0a421358ebe5faa8e8630e, putative proteorhodopsin gene, partial cds. PRGD_OTU036_a977e0670e0a421358ebe5faa8e8630e, putative proteorhodopsin gene, partial cds. KJ928437 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-14.48, 113.45; -33.28, 45.35) TTGTTGACCGTTCCACTTCAGATGATTGAGTTCTATCTGATACTTGCCGCCATCGGTTTGGCATCAGCTGGAATGTTCTGGAGACTATTGATCGGCACAATGATCATGTTGGTTGCTGGTTTTATGGGCGAAGCTGGTTATATCGATGCTACAGTCGGATTTGTAATTGGAATGCTAGGATGGTTCTACATTCTGTATGAAATTTTTGCTGGCGATGCGGGCAAACAGGCGGGACAAGCCTCAGCTGCAGTCCAGAGTGCATTCGGCAATATGCGCTTAGTGGTCACCATC LLTVPLQMIEFYLILAAIGLASAGMFWRLLIGTMIMLVAGFMGEAGYIDATVGFVIGMLGWFYILYEIFAGDAGKQAGQASAAVQSAFGNMRLVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTGACCGTTCCACTTCAGATGATTGAGTTCTATCTGATACTTGCCGCC---------ATC---GGTTTGGCATCAGCT---GGAATG------------------------------------TTCTGGAGA---CTATTGATCGGCACAATGATCATGTTGGTTGCTGGTTTTATGGGCGAA---------GCT------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------GATGCT------------------ACAGTCGGA---TTTGTAATTGGAATGCTAGGATGGTTCTACATTCTGTATGAAATT---------------TTT------GCT---GGCGATGCGGGCAAA---CAGGCGGGA------CAA---GCCTCAGCTGCAGTC---CAG---AGT---GCA---TTC---GGC---AATATG---CGCTTAGTGGTCACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMIEFYLILAA---I-GLASA-GM------------FWR-LLIGTMIMLVAGFMGE---A------G--Y-----------I----------------------DA------TVG-FVIGMLGWFYILYEI-----F--A-GDAGK-QAG--Q-ASAAV-Q-S-A-F-G-NM-RLVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-a]_KJ928444 [III-Gamma4-a] PRGD_OTU036_f3255bcc945dfd2436dc552bf7bf8738 gb|KJ928444| PRGD_OTU036_f3255bcc945dfd2436dc552bf7bf8738, putative proteorhodopsin gene, partial cds. PRGD_OTU036_f3255bcc945dfd2436dc552bf7bf8738, putative proteorhodopsin gene, partial cds. KJ928444 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.935 18.508 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175; 33.935, 18.508), Indian Ocean (-14.48, 113.45) CTGTTGACCGTTCCTCTTCAGATGATTGAGTTCTATCTAATACTTGCTGCCATCGGTTTGGCATCAGCTGGAATGTTCTGGAGACTATTGATCGGCACAATGATCATGTTGGTTGCTGGTTTTATGGGCGAAGCTGGTTATATCGATGCTACAGTCGGATTTGTCATAGGAATGCTGGGATGGTTCTACATTCTGTATGAAATTTTTGCTGGCGATGCGGGAAAACAGGCGGGACAAGCCTCAGCTGCAGTCCAGAGTGCATTTGGAAATATGCGCTTAGTGGTCACTATC LLTVPLQMIEFYLILAAIGLASAGMFWRLLIGTMIMLVAGFMGEAGYIDATVGFVIGMLGWFYILYEIFAGDAGKQAGQASAAVQSAFGNMRLVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTGACCGTTCCTCTTCAGATGATTGAGTTCTATCTAATACTTGCTGCC---------ATC---GGTTTGGCATCAGCT---GGAATG------------------------------------TTCTGGAGA---CTATTGATCGGCACAATGATCATGTTGGTTGCTGGTTTTATGGGCGAA---------GCT------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------GATGCT------------------ACAGTCGGA---TTTGTCATAGGAATGCTGGGATGGTTCTACATTCTGTATGAAATT---------------TTT------GCT---GGCGATGCGGGAAAA---CAGGCGGGA------CAA---GCCTCAGCTGCAGTC---CAG---AGT---GCA---TTT---GGA---AATATG---CGCTTAGTGGTCACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMIEFYLILAA---I-GLASA-GM------------FWR-LLIGTMIMLVAGFMGE---A------G--Y-----------I----------------------DA------TVG-FVIGMLGWFYILYEI-----F--A-GDAGK-QAG--Q-ASAAV-Q-S-A-F-G-NM-RLVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-a]_KJ928425 [III-Gamma4-a] PRGD_OTU036_218ab9ff0c993f27bf18bcf2cc77aeb3 gb|KJ928425| PRGD_OTU036_218ab9ff0c993f27bf18bcf2cc77aeb3, putative proteorhodopsin gene, partial cds. PRGD_OTU036_218ab9ff0c993f27bf18bcf2cc77aeb3, putative proteorhodopsin gene, partial cds. KJ928425 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.935 18.508 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTGTTGACCGTTCCACTTCAGATGATTGAGTTCTATCTGATACTTGCTGCCATCGGTTTGGCATCAGCTGGAATGTTCTGGAGACTATTAATCGGCACAATGATCATGTTGGTTGCTGGTTTTATGGGCGAAGCTGGTTATATCGATGCTACAGTCGGATTTGTCATAGGAATGCTGGGATGGTTCTACATTCTGTATGAAATTTTTGCTGGCGATGCGGGAAAACAGGCGGGACAAGCCTCAGCTGCAGTCCAGAGTGCATTTGGAAATATGCGCTTAGTGGTCACTATC LLTVPLQMIEFYLILAAIGLASAGMFWRLLIGTMIMLVAGFMGEAGYIDATVGFVIGMLGWFYILYEIFAGDAGKQAGQASAAVQSAFGNMRLVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTGACCGTTCCACTTCAGATGATTGAGTTCTATCTGATACTTGCTGCC---------ATC---GGTTTGGCATCAGCT---GGAATG------------------------------------TTCTGGAGA---CTATTAATCGGCACAATGATCATGTTGGTTGCTGGTTTTATGGGCGAA---------GCT------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------GATGCT------------------ACAGTCGGA---TTTGTCATAGGAATGCTGGGATGGTTCTACATTCTGTATGAAATT---------------TTT------GCT---GGCGATGCGGGAAAA---CAGGCGGGA------CAA---GCCTCAGCTGCAGTC---CAG---AGT---GCA---TTT---GGA---AATATG---CGCTTAGTGGTCACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMIEFYLILAA---I-GLASA-GM------------FWR-LLIGTMIMLVAGFMGE---A------G--Y-----------I----------------------DA------TVG-FVIGMLGWFYILYEI-----F--A-GDAGK-QAG--Q-ASAAV-Q-S-A-F-G-NM-RLVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-a]_KJ928431 [III-Gamma4-a] PRGD_OTU036_70306ebc743b4ad052d3357d6d74c342 gb|KJ928431| PRGD_OTU036_70306ebc743b4ad052d3357d6d74c342, putative proteorhodopsin gene, partial cds. PRGD_OTU036_70306ebc743b4ad052d3357d6d74c342, putative proteorhodopsin gene, partial cds. KJ928431 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.935 18.508 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508) CTGTTGACCGTTCCACTTCAAATGATTGAGTTCTATCTGATACTTGCTGCCATCGGTTTGGCATCAGCTGGAATGTTCTGGAGACTATTGATCGGCACAATGATCATGTTGGTTGCTGGTTTTATGGGCGAAGCTGGTTATATCGATGCCACAGTCGGATTTGTCATAGGAATGCTGGGATGGTTCTACATTCTGTATGAAATTTTTGCTGGCGATGCGGGAAAACAGGCGGGACAAGCCTCAGCTGCAGTCCAGAGTGCATTTGGAAATATGCGCTTGGTAGTCACTATC LLTVPLQMIEFYLILAAIGLASAGMFWRLLIGTMIMLVAGFMGEAGYIDATVGFVIGMLGWFYILYEIFAGDAGKQAGQASAAVQSAFGNMRLVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTGACCGTTCCACTTCAAATGATTGAGTTCTATCTGATACTTGCTGCC---------ATC---GGTTTGGCATCAGCT---GGAATG------------------------------------TTCTGGAGA---CTATTGATCGGCACAATGATCATGTTGGTTGCTGGTTTTATGGGCGAA---------GCT------------------GGT------TAT---------------------------------ATC------------------------------------------------------------------GATGCC------------------ACAGTCGGA---TTTGTCATAGGAATGCTGGGATGGTTCTACATTCTGTATGAAATT---------------TTT------GCT---GGCGATGCGGGAAAA---CAGGCGGGA------CAA---GCCTCAGCTGCAGTC---CAG---AGT---GCA---TTT---GGA---AATATG---CGCTTGGTAGTCACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMIEFYLILAA---I-GLASA-GM------------FWR-LLIGTMIMLVAGFMGE---A------G--Y-----------I----------------------DA------TVG-FVIGMLGWFYILYEI-----F--A-GDAGK-QAG--Q-ASAAV-Q-S-A-F-G-NM-RLVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-a]_KJ928422 [III-Gamma4-a] PRGD_OTU036_otuREP_b0ab8ea2a5e548ca3f3bc3b6d44bd57d gb|KJ928422| PRGD_OTU036_otuREP_b0ab8ea2a5e548ca3f3bc3b6d44bd57d, putative proteorhodopsin gene, partial cds. PRGD_OTU036_otuREP_b0ab8ea2a5e548ca3f3bc3b6d44bd57d, putative proteorhodopsin gene, partial cds. KJ928422 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTACTCACTGTTCCTCTTCAGATGATTGAGTTTTATCTGATATTGGCGGCTATCGGTTTGGCTTCAGCTGGAATGTTCTGGAGACTACTAGTCGGTACAATGATTATGTTAATTGCTGGTTTCATGGGCGAAGCTGGATATATCGATGCTACGGTCGGATTCGTTATAGGTATGTTGGGATGGTTTTATATCCTATACGAAATTTTCGCCGGCGATGCTGGCAAACAAGCCGGACAAGCGTCACCTGCAGTGCAAAGCGCATTTGGAAATATGCGGTTAGTCGTAACAATT LLTVPLQMIEFYLILAAIGLASAGMFWRLLVGTMIMLIAGFMGEAGYIDATVGFVIGMLGWFYILYEIFAGDAGKQAGQASPAVQSAFGNMRLVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTCACTGTTCCTCTTCAGATGATTGAGTTTTATCTGATATTGGCGGCT---------ATC---GGTTTGGCTTCAGCT---GGAATG------------------------------------TTCTGGAGA---CTACTAGTCGGTACAATGATTATGTTAATTGCTGGTTTCATGGGCGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------GATGCT------------------ACGGTCGGA---TTCGTTATAGGTATGTTGGGATGGTTTTATATCCTATACGAAATT---------------TTC------GCC---GGCGATGCTGGCAAA---CAAGCCGGA------CAA---GCGTCACCTGCAGTG---CAA---AGC---GCA---TTT---GGA---AATATG---CGGTTAGTCGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMIEFYLILAA---I-GLASA-GM------------FWR-LLVGTMIMLIAGFMGE---A------G--Y-----------I----------------------DA------TVG-FVIGMLGWFYILYEI-----F--A-GDAGK-QAG--Q-ASPAV-Q-S-A-F-G-NM-RLVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-a]_KJ928430 [III-Gamma4-a] PRGD_OTU036_6789dd753e233909b276e1a5a565ca79 gb|KJ928430| PRGD_OTU036_6789dd753e233909b276e1a5a565ca79, putative proteorhodopsin gene, partial cds. PRGD_OTU036_6789dd753e233909b276e1a5a565ca79, putative proteorhodopsin gene, partial cds. KJ928430 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508) TTACTCACTGTTCCTCTTCAGATGATTGAGTTTTATCTGATATTGGCGGCTATCGGGTTGGCTTCAGCTGGAATGTTCTGGAGACTACTAGTTGGTACAATGATTATGTTAGTTGCTGGTTTCATGGGCGAAGCTGGATATATCGATGCTATGGTCGGATTCGTTATAGGTATGTTGGGATGGTTTTATATCCTATACGAAATTTTCGCCGGCGATGCTGGCAAACAAGCCGGACAAGCGTCACCTGCAGTGCAAAGCGCATTTGGAAATATGCGTTTAGTCGTCACAATT LLTVPLQMIEFYLILAAIGLASAGMFWRLLVGTMIMLVAGFMGEAGYIDAMVGFVIGMLGWFYILYEIFAGDAGKQAGQASPAVQSAFGNMRLVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTCACTGTTCCTCTTCAGATGATTGAGTTTTATCTGATATTGGCGGCT---------ATC---GGGTTGGCTTCAGCT---GGAATG------------------------------------TTCTGGAGA---CTACTAGTTGGTACAATGATTATGTTAGTTGCTGGTTTCATGGGCGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------GATGCT------------------ATGGTCGGA---TTCGTTATAGGTATGTTGGGATGGTTTTATATCCTATACGAAATT---------------TTC------GCC---GGCGATGCTGGCAAA---CAAGCCGGA------CAA---GCGTCACCTGCAGTG---CAA---AGC---GCA---TTT---GGA---AATATG---CGTTTAGTCGTCACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMIEFYLILAA---I-GLASA-GM------------FWR-LLVGTMIMLVAGFMGE---A------G--Y-----------I----------------------DA------MVG-FVIGMLGWFYILYEI-----F--A-GDAGK-QAG--Q-ASPAV-Q-S-A-F-G-NM-RLVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-a]_KJ928435 [III-Gamma4-a] PRGD_OTU036_9bac1b206142f691f1a3b8b43cda3cbb gb|KJ928435| PRGD_OTU036_9bac1b206142f691f1a3b8b43cda3cbb, putative proteorhodopsin gene, partial cds. PRGD_OTU036_9bac1b206142f691f1a3b8b43cda3cbb, putative proteorhodopsin gene, partial cds. KJ928435 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Indian Ocean (-33.28, 45.35) TTACTCACTGTTCCTCTTCAGATGATTGAGTTTTATCTGATACTGGCGGCTATCGGTTTGGCTTCAGCTGGAATGTTCTGGAGACTACTAGTCGGTACAATGATTATGTTAATTGCTGGTTTCATGGGCGAAGCTGGATATATCGATGCTATGGTCGGATTCGTTGTGGGTATGTTGGGATGGTTTTATATTCTATACGAAATTTTCGCCGGCGATGCTGGCAAACAAGCCGGACAAGCGTCACCTGCAGTGCAAAGCGCATTTGGAAATATGCGTTTAGTCGTCACAATT LLTVPLQMIEFYLILAAIGLASAGMFWRLLVGTMIMLIAGFMGEAGYIDAMVGFVVGMLGWFYILYEIFAGDAGKQAGQASPAVQSAFGNMRLVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTCACTGTTCCTCTTCAGATGATTGAGTTTTATCTGATACTGGCGGCT---------ATC---GGTTTGGCTTCAGCT---GGAATG------------------------------------TTCTGGAGA---CTACTAGTCGGTACAATGATTATGTTAATTGCTGGTTTCATGGGCGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------GATGCT------------------ATGGTCGGA---TTCGTTGTGGGTATGTTGGGATGGTTTTATATTCTATACGAAATT---------------TTC------GCC---GGCGATGCTGGCAAA---CAAGCCGGA------CAA---GCGTCACCTGCAGTG---CAA---AGC---GCA---TTT---GGA---AATATG---CGTTTAGTCGTCACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMIEFYLILAA---I-GLASA-GM------------FWR-LLVGTMIMLIAGFMGE---A------G--Y-----------I----------------------DA------MVG-FVVGMLGWFYILYEI-----F--A-GDAGK-QAG--Q-ASPAV-Q-S-A-F-G-NM-RLVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-a]_KJ928442 [III-Gamma4-a] PRGD_OTU036_e8c5989a2827c23a2e3f4df711703d3b gb|KJ928442| PRGD_OTU036_e8c5989a2827c23a2e3f4df711703d3b, putative proteorhodopsin gene, partial cds. PRGD_OTU036_e8c5989a2827c23a2e3f4df711703d3b, putative proteorhodopsin gene, partial cds. KJ928442 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508) TTACTCACTGTTCCTCTTCAGATGATTGAGTTTTATCTGATACTGGCAGCTATCGGGTTGGCTTCAGCTGGAATGTTCTGGAGACTACTAGTCGGTACAATGATTATGTTAATTGCTGGTTTCATGGGCGAAGCTGGATATATCGATGCTATGGTCGGATTTGTTATAGGTATGTTGGGATGGTTTTATATCCTATACGAAATTTTCGCCGGCGATGCTGGCAAACAAGCCGGACAAGCGTCACCTGCAGTGCAAAGCGCATTTGGAAATATGCGTTTAGTCGTCACAATC LLTVPLQMIEFYLILAAIGLASAGMFWRLLVGTMIMLIAGFMGEAGYIDAMVGFVIGMLGWFYILYEIFAGDAGKQAGQASPAVQSAFGNMRLVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTCACTGTTCCTCTTCAGATGATTGAGTTTTATCTGATACTGGCAGCT---------ATC---GGGTTGGCTTCAGCT---GGAATG------------------------------------TTCTGGAGA---CTACTAGTCGGTACAATGATTATGTTAATTGCTGGTTTCATGGGCGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------GATGCT------------------ATGGTCGGA---TTTGTTATAGGTATGTTGGGATGGTTTTATATCCTATACGAAATT---------------TTC------GCC---GGCGATGCTGGCAAA---CAAGCCGGA------CAA---GCGTCACCTGCAGTG---CAA---AGC---GCA---TTT---GGA---AATATG---CGTTTAGTCGTCACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMIEFYLILAA---I-GLASA-GM------------FWR-LLVGTMIMLIAGFMGE---A------G--Y-----------I----------------------DA------MVG-FVIGMLGWFYILYEI-----F--A-GDAGK-QAG--Q-ASPAV-Q-S-A-F-G-NM-RLVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-a]_KJ928447 [III-Gamma4-a] PRGD_OTU036_ff942f2023f57619dbdcdf274c5ebce4 gb|KJ928447| PRGD_OTU036_ff942f2023f57619dbdcdf274c5ebce4, putative proteorhodopsin gene, partial cds. PRGD_OTU036_ff942f2023f57619dbdcdf274c5ebce4, putative proteorhodopsin gene, partial cds. KJ928447 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (73.9992, 19.2097), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Indian Ocean (-14.48, 113.45) TTACTCACTGTTCCTCTTCAGATGATTGAGTTTTATCTGATACTGGCAGCTATCGGTTTGGCTTCAGCTGGAATGTTCTGGAGACTACTAGTCGGTACAATGATAATGTTAATTGCTGGTTTCATGGGCGAAGCTGGATATATCGATGCTATGGTCGGATTCGTTATCGGTATGTTGGGATGGTTTTATATTCTATACGAAATTTTCGCCGGCGATGCTGGCAAACAAGCCGGACAAGCGTCACCTGCAGTGCAAAGCGCATTTGGAAATATGCGTTTAGTCGTTACAATT LLTVPLQMIEFYLILAAIGLASAGMFWRLLVGTMIMLIAGFMGEAGYIDAMVGFVIGMLGWFYILYEIFAGDAGKQAGQASPAVQSAFGNMRLVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTCACTGTTCCTCTTCAGATGATTGAGTTTTATCTGATACTGGCAGCT---------ATC---GGTTTGGCTTCAGCT---GGAATG------------------------------------TTCTGGAGA---CTACTAGTCGGTACAATGATAATGTTAATTGCTGGTTTCATGGGCGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------GATGCT------------------ATGGTCGGA---TTCGTTATCGGTATGTTGGGATGGTTTTATATTCTATACGAAATT---------------TTC------GCC---GGCGATGCTGGCAAA---CAAGCCGGA------CAA---GCGTCACCTGCAGTG---CAA---AGC---GCA---TTT---GGA---AATATG---CGTTTAGTCGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMIEFYLILAA---I-GLASA-GM------------FWR-LLVGTMIMLIAGFMGE---A------G--Y-----------I----------------------DA------MVG-FVIGMLGWFYILYEI-----F--A-GDAGK-QAG--Q-ASPAV-Q-S-A-F-G-NM-RLVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-a]_KJ928424 [III-Gamma4-a] PRGD_OTU036_0ccc929d864166dfb890a51257d4fdb0 gb|KJ928424| PRGD_OTU036_0ccc929d864166dfb890a51257d4fdb0, putative proteorhodopsin gene, partial cds. PRGD_OTU036_0ccc929d864166dfb890a51257d4fdb0, putative proteorhodopsin gene, partial cds. KJ928424 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.935, 18.508), Indian Ocean (-33.28, 45.35) TTACTCACTGTTCCTCTTCAGATGATTGAGTTTTATCTGATACTGGCGGCTATCGGTTTGGCTTCAGCGGGAATGTTCTGGAGACTACTAGTCGGTACAATGATTATGTTAATTGCTGGTTTCATGGGCGAAGCTGGATATATCGATGCTATGGTCGGATTCGTTATAGGTATGCTGGGATGGTTTTATATTCTATACGAAATTTTCGCCGGCGATGCTGGCAAACAAGCCGGACAAGCGTCACCTGCGGTGCAAAGCGCATTTGGAAATATGCGTTTAGTCGTCACAATT LLTVPLQMIEFYLILAAIGLASAGMFWRLLVGTMIMLIAGFMGEAGYIDAMVGFVIGMLGWFYILYEIFAGDAGKQAGQASPAVQSAFGNMRLVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTCACTGTTCCTCTTCAGATGATTGAGTTTTATCTGATACTGGCGGCT---------ATC---GGTTTGGCTTCAGCG---GGAATG------------------------------------TTCTGGAGA---CTACTAGTCGGTACAATGATTATGTTAATTGCTGGTTTCATGGGCGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------GATGCT------------------ATGGTCGGA---TTCGTTATAGGTATGCTGGGATGGTTTTATATTCTATACGAAATT---------------TTC------GCC---GGCGATGCTGGCAAA---CAAGCCGGA------CAA---GCGTCACCTGCGGTG---CAA---AGC---GCA---TTT---GGA---AATATG---CGTTTAGTCGTCACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMIEFYLILAA---I-GLASA-GM------------FWR-LLVGTMIMLIAGFMGE---A------G--Y-----------I----------------------DA------MVG-FVIGMLGWFYILYEI-----F--A-GDAGK-QAG--Q-ASPAV-Q-S-A-F-G-NM-RLVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-a]_KJ928443 [III-Gamma4-a] PRGD_OTU036_f06893c19f2641484ff26fd5c319cca3 gb|KJ928443| PRGD_OTU036_f06893c19f2641484ff26fd5c319cca3, putative proteorhodopsin gene, partial cds. PRGD_OTU036_f06893c19f2641484ff26fd5c319cca3, putative proteorhodopsin gene, partial cds. KJ928443 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508) TTACTCACTGTTCCTCTTCAGATGATTGAGTTTTATCTGATACTGGCGGCTATCGGTTTGGCTTCAGCTGGAATGTTCTGGAGACTACTAGTCGGCACAATGATTATGTTAGTTGCTGGTTTCATGGGCGAAGCTGGATATATCGATGCTATGGTCGGATTCGTTATAGGTATGTTGGGATGGTTTTATATTCTATACGAAATTTTTGCCGGCGATGCTGGCAAACAAGCCGGACAAGCGTCACCTGCAGTGCAAAGCGCATTTGGAAATATGCGTTTAGTCGTCACAATT LLTVPLQMIEFYLILAAIGLASAGMFWRLLVGTMIMLVAGFMGEAGYIDAMVGFVIGMLGWFYILYEIFAGDAGKQAGQASPAVQSAFGNMRLVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTCACTGTTCCTCTTCAGATGATTGAGTTTTATCTGATACTGGCGGCT---------ATC---GGTTTGGCTTCAGCT---GGAATG------------------------------------TTCTGGAGA---CTACTAGTCGGCACAATGATTATGTTAGTTGCTGGTTTCATGGGCGAA---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------GATGCT------------------ATGGTCGGA---TTCGTTATAGGTATGTTGGGATGGTTTTATATTCTATACGAAATT---------------TTT------GCC---GGCGATGCTGGCAAA---CAAGCCGGA------CAA---GCGTCACCTGCAGTG---CAA---AGC---GCA---TTT---GGA---AATATG---CGTTTAGTCGTCACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMIEFYLILAA---I-GLASA-GM------------FWR-LLVGTMIMLVAGFMGE---A------G--Y-----------I----------------------DA------MVG-FVIGMLGWFYILYEI-----F--A-GDAGK-QAG--Q-ASPAV-Q-S-A-F-G-NM-RLVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-a]_KJ928429 [III-Gamma4-a] PRGD_OTU036_66b7ecab35c9c319f0739f83250b609e gb|KJ928429| PRGD_OTU036_66b7ecab35c9c319f0739f83250b609e, putative proteorhodopsin gene, partial cds. PRGD_OTU036_66b7ecab35c9c319f0739f83250b609e, putative proteorhodopsin gene, partial cds. KJ928429 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175) TTGCTAACCGTCCCGCTTCAGATGATTGAGTTTTACCTGATACTCGCAGCCATTGGCCTCGCGTCGGCTGGAATGTTCTGGAGACTGCTGATCGGCACCATGGTGATGTTAGTGGCTGGTTTTATGGGTGAGGCTGGATATATCAACGCTATGGTTGGGTTCGTTATAGGTATATTGGGATGGTTCTATATCTTATACGAAATTTTCGCCGGTGATGCTGGGAAGCAAGCAGGGCAAGCGTCGCCCGCTGTTCAAAGTGCATTTGGGAATATGCGTCTGGTTGTTACTATA LLTVPLQMIEFYLILAAIGLASAGMFWRLLIGTMVMLVAGFMGEAGYINAMVGFVIGILGWFYILYEIFAGDAGKQAGQASPAVQSAFGNMRLVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTAACCGTCCCGCTTCAGATGATTGAGTTTTACCTGATACTCGCAGCC---------ATT---GGCCTCGCGTCGGCT---GGAATG------------------------------------TTCTGGAGA---CTGCTGATCGGCACCATGGTGATGTTAGTGGCTGGTTTTATGGGTGAG---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ATGGTTGGG---TTCGTTATAGGTATATTGGGATGGTTCTATATCTTATACGAAATT---------------TTC------GCC---GGTGATGCTGGGAAG---CAAGCAGGG------CAA---GCGTCGCCCGCTGTT---CAA---AGT---GCA---TTT---GGG---AATATG---CGTCTGGTTGTTACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMIEFYLILAA---I-GLASA-GM------------FWR-LLIGTMVMLVAGFMGE---A------G--Y-----------I----------------------NA------MVG-FVIGILGWFYILYEI-----F--A-GDAGK-QAG--Q-ASPAV-Q-S-A-F-G-NM-RLVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-a]_KJ928434 [III-Gamma4-a] PRGD_OTU036_895cdb3abb5d70c26fbe5f9ebe51ff6f gb|KJ928434| PRGD_OTU036_895cdb3abb5d70c26fbe5f9ebe51ff6f, putative proteorhodopsin gene, partial cds. PRGD_OTU036_895cdb3abb5d70c26fbe5f9ebe51ff6f, putative proteorhodopsin gene, partial cds. KJ928434 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (72.0542, -130.8781), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTGCTAACCGTCCCACTTCAGATGATCGAGTTTTACCTGATACTCGCAGCCATTGGCCTCGCGTCGGCTGGAATGTTCTGGAGACTGCTGATCGGCACCATGGTGATGTTAGTGGCTGGTTTTATGGGCGAGGCTGGATATATCAACGCTATGGTCGGGTTCGTTATAGGTATATTGGGATGGTTCTATATCTTATACGAAATTTTTGCCGGTGATGCTGGGAAGCAAGCAGGGCAAGCGTCGCCCGCTGTTCAAAGTGCATTTGGGAATATGCGTCTAGTTGTTACTATA LLTVPLQMIEFYLILAAIGLASAGMFWRLLIGTMVMLVAGFMGEAGYINAMVGFVIGILGWFYILYEIFAGDAGKQAGQASPAVQSAFGNMRLVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTAACCGTCCCACTTCAGATGATCGAGTTTTACCTGATACTCGCAGCC---------ATT---GGCCTCGCGTCGGCT---GGAATG------------------------------------TTCTGGAGA---CTGCTGATCGGCACCATGGTGATGTTAGTGGCTGGTTTTATGGGCGAG---------GCT------------------GGA------TAT---------------------------------ATC------------------------------------------------------------------AACGCT------------------ATGGTCGGG---TTCGTTATAGGTATATTGGGATGGTTCTATATCTTATACGAAATT---------------TTT------GCC---GGTGATGCTGGGAAG---CAAGCAGGG------CAA---GCGTCGCCCGCTGTT---CAA---AGT---GCA---TTT---GGG---AATATG---CGTCTAGTTGTTACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMIEFYLILAA---I-GLASA-GM------------FWR-LLIGTMVMLVAGFMGE---A------G--Y-----------I----------------------NA------MVG-FVIGILGWFYILYEI-----F--A-GDAGK-QAG--Q-ASPAV-Q-S-A-F-G-NM-RLVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-a]_KJ928445 [III-Gamma4-a] PRGD_OTU036_f6d6cf7cabbe5d76587e6d05f0e9bb04 gb|KJ928445| PRGD_OTU036_f6d6cf7cabbe5d76587e6d05f0e9bb04, putative proteorhodopsin gene, partial cds. PRGD_OTU036_f6d6cf7cabbe5d76587e6d05f0e9bb04, putative proteorhodopsin gene, partial cds. KJ928445 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTGCTAACCGTCCCACTTCAGATGATCGAGTTTTACCTGATACTCGCAGCCATTGGCCTCGCGTCGGCTGGAATGTTCTGGAGACTGCTGATCGGCACCATGGTCATGTTAGTGGCTGGTTTCATGGGCGAGGCTGGATATATGAACGCTATGGTTGGGTTTGTTATAGGTATATTGGGATGGTTCTATATCTTATACGAAATTTTTGCCGGTGATGCTGGGAAGCAAGCAGGGCAAGCGTCACCCGCTGTTCAAAGTGCATTTGGGAATATGCGTCTAGTTGTTACTATA LLTVPLQMIEFYLILAAIGLASAGMFWRLLIGTMVMLVAGFMGEAGYMNAMVGFVIGILGWFYILYEIFAGDAGKQAGQASPAVQSAFGNMRLVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTAACCGTCCCACTTCAGATGATCGAGTTTTACCTGATACTCGCAGCC---------ATT---GGCCTCGCGTCGGCT---GGAATG------------------------------------TTCTGGAGA---CTGCTGATCGGCACCATGGTCATGTTAGTGGCTGGTTTCATGGGCGAG---------GCT------------------GGA------TAT---------------------------------ATG------------------------------------------------------------------AACGCT------------------ATGGTTGGG---TTTGTTATAGGTATATTGGGATGGTTCTATATCTTATACGAAATT---------------TTT------GCC---GGTGATGCTGGGAAG---CAAGCAGGG------CAA---GCGTCACCCGCTGTT---CAA---AGT---GCA---TTT---GGG---AATATG---CGTCTAGTTGTTACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMIEFYLILAA---I-GLASA-GM------------FWR-LLIGTMVMLVAGFMGE---A------G--Y-----------M----------------------NA------MVG-FVIGILGWFYILYEI-----F--A-GDAGK-QAG--Q-ASPAV-Q-S-A-F-G-NM-RLVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-a]_KJ928439 [III-Gamma4-a] PRGD_OTU036_c70848f73defa89e54bf30cbca23df94 gb|KJ928439| PRGD_OTU036_c70848f73defa89e54bf30cbca23df94, putative proteorhodopsin gene, partial cds. PRGD_OTU036_c70848f73defa89e54bf30cbca23df94, putative proteorhodopsin gene, partial cds. KJ928439 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGCTAACCGTCCCACTTCAGATGATTGAGTTTTACCTGATACTCGCGGCCATTGGCCTAGCATCGGCTGGAATGTTCTGGAGACTCCTCATCGGTACCATGGTGATGTTGGTGGCTGGTTTCATGGGCGAGGCTGGGTATATCAACTCTATGGTCGGATTTGTTATAGGTATGTTGGGATGGTTCTACATCTTGTACGAAATTTTTGCCGGTGATGCTGGGAAGCAAGCGGGACAAGCTTCCCCTGCCGTCCAAAGCGCATTTGGGAACATGCGTCTAGTCGTTACTATC LLTVPLQMIEFYLILAAIGLASAGMFWRLLIGTMVMLVAGFMGEAGYINSMVGFVIGMLGWFYILYEIFAGDAGKQAGQASPAVQSAFGNMRLVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTAACCGTCCCACTTCAGATGATTGAGTTTTACCTGATACTCGCGGCC---------ATT---GGCCTAGCATCGGCT---GGAATG------------------------------------TTCTGGAGA---CTCCTCATCGGTACCATGGTGATGTTGGTGGCTGGTTTCATGGGCGAG---------GCT------------------GGG------TAT---------------------------------ATC------------------------------------------------------------------AACTCT------------------ATGGTCGGA---TTTGTTATAGGTATGTTGGGATGGTTCTACATCTTGTACGAAATT---------------TTT------GCC---GGTGATGCTGGGAAG---CAAGCGGGA------CAA---GCTTCCCCTGCCGTC---CAA---AGC---GCA---TTT---GGG---AACATG---CGTCTAGTCGTTACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMIEFYLILAA---I-GLASA-GM------------FWR-LLIGTMVMLVAGFMGE---A------G--Y-----------I----------------------NS------MVG-FVIGMLGWFYILYEI-----F--A-GDAGK-QAG--Q-ASPAV-Q-S-A-F-G-NM-RLVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-a]_KJ928446 [III-Gamma4-a] PRGD_OTU036_fa83bfdd32a9c1e7ee6645ba836adc2b gb|KJ928446| PRGD_OTU036_fa83bfdd32a9c1e7ee6645ba836adc2b, putative proteorhodopsin gene, partial cds. PRGD_OTU036_fa83bfdd32a9c1e7ee6645ba836adc2b, putative proteorhodopsin gene, partial cds. KJ928446 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/A subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTGCTAACCGTCCCACTTCAGATGATTGAGTTTTACCTGATACTCGCGGCCATTGGCCTAGCATCAGCTGGAATGTTCTGGAGACTCCTCATCGGTACCATGGTGATGTTGGTGGCTGGTTTCATGGGCGAGGCTGGGTATATCAACTCTATGGTCGGATTTGTTATAGGTATGTTGGGATGGTTCTACATCTTGTACGAAATTTTTGCCGGTGATGCTGGGAAGCAAGCGGGACAAGCTTCCGCTGCCGTTCAAAGCGCATTTGGGAACATGCGTCTAGTCGTTACGATC LLTVPLQMIEFYLILAAIGLASAGMFWRLLIGTMVMLVAGFMGEAGYINSMVGFVIGMLGWFYILYEIFAGDAGKQAGQASAAVQSAFGNMRLVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTAACCGTCCCACTTCAGATGATTGAGTTTTACCTGATACTCGCGGCC---------ATT---GGCCTAGCATCAGCT---GGAATG------------------------------------TTCTGGAGA---CTCCTCATCGGTACCATGGTGATGTTGGTGGCTGGTTTCATGGGCGAG---------GCT------------------GGG------TAT---------------------------------ATC------------------------------------------------------------------AACTCT------------------ATGGTCGGA---TTTGTTATAGGTATGTTGGGATGGTTCTACATCTTGTACGAAATT---------------TTT------GCC---GGTGATGCTGGGAAG---CAAGCGGGA------CAA---GCTTCCGCTGCCGTT---CAA---AGC---GCA---TTT---GGG---AACATG---CGTCTAGTCGTTACGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMIEFYLILAA---I-GLASA-GM------------FWR-LLIGTMVMLVAGFMGE---A------G--Y-----------I----------------------NS------MVG-FVIGMLGWFYILYEI-----F--A-GDAGK-QAG--Q-ASAAV-Q-S-A-F-G-NM-RLVVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Gamma4-Vibrio]_KJ929857 [III-Gamma4-Vibrio] PRGD_OTU308_otuREP_ac0c18c347d0ba771f5b0e6e5de00cbd gb|KJ929857| PRGD_OTU308_otuREP_ac0c18c347d0ba771f5b0e6e5de00cbd, putative proteorhodopsin gene, partial cds. PRGD_OTU308_otuREP_ac0c18c347d0ba771f5b0e6e5de00cbd, putative proteorhodopsin gene, partial cds. KJ929857 [[proteorhodopsin super-cluster III/Gammaproteobacterial-like cluster 4/Glaciecola-like Vibrio-like subcluster]] proteorhodopsin super-cluster III Gammaproteobacterial-like cluster 4 Glaciecola-like Vibrio-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) TTGTTGACTGTACCATTGCTGATGATTGAATTTTATCTGATATTACGTGCTATTGGCGTTGCATCTCCTGGTATATTCTGGCGTCTGTTGATCGGTACATTGGTTATGTTGATTCCAGGGTATCTGGCAGAAGCGGGTTACATGAATATCACTATAGGTTTCGTTATCGGTATGCTAGGTTGGTTCTACATTCTTTATGAAATCTTTTTTGGTGCAGCTGGTAAAGCCGCAGAAACCGCAACTAGTCCTGCTGTAAAGTATACATACAACGCTATGCGCTGGATCGTAACTGTT LLTVPLLMIEFYLILRAIGVASPGIFWRLLIGTLVMLIPGYLAEAGYMNITIGFVIGMLGWFYILYEIFFGAAGKAAETATSPAVKYTYNAMRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTGACTGTACCATTGCTGATGATTGAATTTTATCTGATATTACGTGCT---------ATT---GGCGTTGCATCTCCT---GGTATA------------------------------------TTCTGGCGT---CTGTTGATCGGTACATTGGTTATGTTGATTCCAGGGTATCTGGCAGAA---------GCG------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATATC------------------ACTATAGGT---TTCGTTATCGGTATGCTAGGTTGGTTCTACATTCTTTATGAAATC---------------TTT------TTT---GGTGCAGCTGGTAAAGCCGCAGAAACC------GCA---ACTAGTCCTGCTGTA---AAG---TAT---ACA---TAC---AAC---GCTATG---CGCTGGATCGTAACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILRA---I-GVASP-GI------------FWR-LLIGTLVMLIPGYLAE---A------G--Y-----------M----------------------NI------TIG-FVIGMLGWFYILYEI-----F--F-GAAGKAAET--A-TSPAV-K-Y-T-Y-N-AM-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-SAR116/Himb100]_KJ927313 [III-Alpha1-SAR116/Himb100] PRGD_OTU008a_otuREP_dcafe3e2900e1f6cc730eebe62099fc0 gb|KJ927313| PRGD_OTU008a_otuREP_dcafe3e2900e1f6cc730eebe62099fc0, putative proteorhodopsin gene, partial cds. PRGD_OTU008a_otuREP_dcafe3e2900e1f6cc730eebe62099fc0, putative proteorhodopsin gene, partial cds. KJ927313 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/SAR116 Himb100-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 SAR116 Himb100-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATCACAGTTCCATTGCTGATGATCGAGTTTTATCTGATTTTGCGTGCGATTACCAACGTTTCAGGCGGCATATTTTGGCGCTTGACCATCGGTACATTGGTAATGCTAATCGGTGGTTACTTGGGCGAAGCTGGTTACATGAACGTAACAGTAGCGTTCGTCATTGGCATGGTAGGTTGGGCCTACATTCTGTATGAAATCTTTGCTGGTGAAGCCGGTAAAGTTGCTGCAGAAAAAGCCTCACCTGCTGTAGCATCAGCCTATTCAACAATGCGTTGGATTGTAACAATT LITVPLLMIEFYLILRAITNVSGGIFWRLTIGTLVMLIGGYLGEAGYMNVTVAFVIGMVGWAYILYEIFAGEAGKVAAEKASPAVASAYSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCATTGCTGATGATCGAGTTTTATCTGATTTTGCGTGCG---------ATT---ACCAACGTTTCAGGC---GGCATA------------------------------------TTTTGGCGC---TTGACCATCGGTACATTGGTAATGCTAATCGGTGGTTACTTGGGCGAA---------GCT------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACGTA------------------ACAGTAGCG---TTCGTCATTGGCATGGTAGGTTGGGCCTACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCCGGTAAAGTTGCTGCAGAA------AAA---GCCTCACCTGCTGTA---GCA---TCA---GCC---TAT---TCA---ACAATG---CGTTGGATTGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GI------------FWR-LTIGTLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TVA-FVIGMVGWAYILYEI-----F--A-GEAGKVAAE--K-ASPAV-A-S-A-Y-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-SAR116/Himb100]_KJ927337 [III-Alpha1-SAR116/Himb100] PRGD_OTU008a_e3d0c60e69afdd915e3be08099ece688 gb|KJ927337| PRGD_OTU008a_e3d0c60e69afdd915e3be08099ece688, putative proteorhodopsin gene, partial cds. PRGD_OTU008a_e3d0c60e69afdd915e3be08099ece688, putative proteorhodopsin gene, partial cds. KJ927337 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/SAR116 Himb100-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 SAR116 Himb100-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (73.9992, 19.2097), English Channel (48.7717, -3.9683) TTGATCACAGTTCCATTGCTGATGATTGAATTTTATCTGATTTTGCGTGCGATTACCAACGTTTCAGGCGGCATATTTTGGCGCTTGACCATTGGTACATTGGTAATGCTAATCGGTGGTTACTTGGGCGAAGCTGGTTACATGAACGTAACACTAGCGTTCGTCATTGGTATGGTAGGTTGGGCCTACATTCTGTATGAAATCTTTGCTGGTGAAGCCGGTAAAGTTGCTGCAGAAAAAGCCTCACCTGCTGTAGCATCAGCCTATTCAACAATGCGTTGGATTGTGACAATT LITVPLLMIEFYLILRAITNVSGGIFWRLTIGTLVMLIGGYLGEAGYMNVTLAFVIGMVGWAYILYEIFAGEAGKVAAEKASPAVASAYSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCATTGCTGATGATTGAATTTTATCTGATTTTGCGTGCG---------ATT---ACCAACGTTTCAGGC---GGCATA------------------------------------TTTTGGCGC---TTGACCATTGGTACATTGGTAATGCTAATCGGTGGTTACTTGGGCGAA---------GCT------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACGTA------------------ACACTAGCG---TTCGTCATTGGTATGGTAGGTTGGGCCTACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCCGGTAAAGTTGCTGCAGAA------AAA---GCCTCACCTGCTGTA---GCA---TCA---GCC---TAT---TCA---ACAATG---CGTTGGATTGTGACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GI------------FWR-LTIGTLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TLA-FVIGMVGWAYILYEI-----F--A-GEAGKVAAE--K-ASPAV-A-S-A-Y-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-SAR116/Himb100]_KJ927321 [III-Alpha1-SAR116/Himb100] PRGD_OTU008a_25132a51b5bdcc79251416d8fac110e9 gb|KJ927321| PRGD_OTU008a_25132a51b5bdcc79251416d8fac110e9, putative proteorhodopsin gene, partial cds. PRGD_OTU008a_25132a51b5bdcc79251416d8fac110e9, putative proteorhodopsin gene, partial cds. KJ927321 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/SAR116 Himb100-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 SAR116 Himb100-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATCACAGTTCCATTGCTGATGATTGAGTTTTATCTGATTTTGCGTGCGATTACCAACGTTTCAGGCGGCATATTTTGGCGCTTGACCATCGGTACATTGGTAATGCTAATCGGTGGTTATTTGGGCGAAGCTGGTTACATGAACGTAACAGTAGCGTTCGTCATTGGTATGGTAGGTTGGGCCTACATTCTGTATGAAATCTTTGCTGGTGAAGCTGGTAAAGTTGCTGCAGAAAAAGCCTCACCTGCTGTAGCATCAGCCTATTCAACAATGCGTTGGATCGTGACCATT LITVPLLMIEFYLILRAITNVSGGIFWRLTIGTLVMLIGGYLGEAGYMNVTVAFVIGMVGWAYILYEIFAGEAGKVAAEKASPAVASAYSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTTCCATTGCTGATGATTGAGTTTTATCTGATTTTGCGTGCG---------ATT---ACCAACGTTTCAGGC---GGCATA------------------------------------TTTTGGCGC---TTGACCATCGGTACATTGGTAATGCTAATCGGTGGTTATTTGGGCGAA---------GCT------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACGTA------------------ACAGTAGCG---TTCGTCATTGGTATGGTAGGTTGGGCCTACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGTAAAGTTGCTGCAGAA------AAA---GCCTCACCTGCTGTA---GCA---TCA---GCC---TAT---TCA---ACAATG---CGTTGGATCGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GI------------FWR-LTIGTLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TVA-FVIGMVGWAYILYEI-----F--A-GEAGKVAAE--K-ASPAV-A-S-A-Y-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-SAR116/Himb100]_KJ927328 [III-Alpha1-SAR116/Himb100] PRGD_OTU008a_81c4acecdb22025b2587b4d05d9916a0 gb|KJ927328| PRGD_OTU008a_81c4acecdb22025b2587b4d05d9916a0, putative proteorhodopsin gene, partial cds. PRGD_OTU008a_81c4acecdb22025b2587b4d05d9916a0, putative proteorhodopsin gene, partial cds. KJ927328 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/SAR116 Himb100-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 SAR116 Himb100-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 01-juil-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) TTGATCACAGTGCCATTGCTGATGATCGAGTTCTATCTGATTTTGCGTGCGATTACCAACGTTTCAGGCGGCATTTTCTGGCGCTTGACCATCGGTACATTGGTAATGCTAATCGGTGGTTACTTGGGCGAAGCTGGTTACATGAACGTAACAGTAGCGTTCGTTATTGGTATGGTAGGTTGGGCCTACATTCTGTATGAAATCTTTGCTGGTGAAGCTGGTAAAGTTGCTGCAGAAAAAGCCTCACCTGCTGTGGCATCAGCCTATTCAACAATGCGTTGGATTGTGACCATT LITVPLLMIEFYLILRAITNVSGGIFWRLTIGTLVMLIGGYLGEAGYMNVTVAFVIGMVGWAYILYEIFAGEAGKVAAEKASPAVASAYSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCATTGCTGATGATCGAGTTCTATCTGATTTTGCGTGCG---------ATT---ACCAACGTTTCAGGC---GGCATT------------------------------------TTCTGGCGC---TTGACCATCGGTACATTGGTAATGCTAATCGGTGGTTACTTGGGCGAA---------GCT------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACGTA------------------ACAGTAGCG---TTCGTTATTGGTATGGTAGGTTGGGCCTACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGTAAAGTTGCTGCAGAA------AAA---GCCTCACCTGCTGTG---GCA---TCA---GCC---TAT---TCA---ACAATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GI------------FWR-LTIGTLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TVA-FVIGMVGWAYILYEI-----F--A-GEAGKVAAE--K-ASPAV-A-S-A-Y-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-SAR116/Himb100]_KJ927335 [III-Alpha1-SAR116/Himb100] PRGD_OTU008a_d2af0638dd247279166f9ede27bb89e4 gb|KJ927335| PRGD_OTU008a_d2af0638dd247279166f9ede27bb89e4, putative proteorhodopsin gene, partial cds. PRGD_OTU008a_d2af0638dd247279166f9ede27bb89e4, putative proteorhodopsin gene, partial cds. KJ927335 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/SAR116 Himb100-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 SAR116 Himb100-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTGATCACAGTTCCATTGCTGATGATCGAATTCTATCTGATTTTGCGTGCGATTACCAACGTTTCAGGCGGCATATTCTGGCGCTTGACCATTGGTACATTGGTAATGCTAATCGGTGGTTACTTGGGCGAAGCTGGTTACATGAACGTAACTGTAGCGTTCGTTATTGGTATGGTAGGTTGGGCCTACATTCTGTATGAAATCTTTGCTGGTGAAGCTGGTAAAGTTGCTGCAGAAAAAGCCTCACCTGCTGTAGCATCAGCCTATTCAACAATGCGTTGGATTGTGACCATT LITVPLLMIEFYLILRAITNVSGGIFWRLTIGTLVMLIGGYLGEAGYMNVTVAFVIGMVGWAYILYEIFAGEAGKVAAEKASPAVASAYSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCATTGCTGATGATCGAATTCTATCTGATTTTGCGTGCG---------ATT---ACCAACGTTTCAGGC---GGCATA------------------------------------TTCTGGCGC---TTGACCATTGGTACATTGGTAATGCTAATCGGTGGTTACTTGGGCGAA---------GCT------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACGTA------------------ACTGTAGCG---TTCGTTATTGGTATGGTAGGTTGGGCCTACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGTAAAGTTGCTGCAGAA------AAA---GCCTCACCTGCTGTA---GCA---TCA---GCC---TAT---TCA---ACAATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GI------------FWR-LTIGTLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TVA-FVIGMVGWAYILYEI-----F--A-GEAGKVAAE--K-ASPAV-A-S-A-Y-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-SAR116/Himb100]_KJ927314 [III-Alpha1-SAR116/Himb100] PRGD_OTU008a_0001a96d8405454d68d6748e5fcb34eb gb|KJ927314| PRGD_OTU008a_0001a96d8405454d68d6748e5fcb34eb, putative proteorhodopsin gene, partial cds. PRGD_OTU008a_0001a96d8405454d68d6748e5fcb34eb, putative proteorhodopsin gene, partial cds. KJ927314 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/SAR116 Himb100-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 SAR116 Himb100-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419) TTGATCACAGTTCCATTGCTGATGATCGAATTCTATCTGATTTTGCGTGCGATTACCAACGTTTCAGGCGGCATATTCTGGCGCTTGACGATCGGTACATTGGTAATGCTAATCGGTGGTTACTTGGGCGAAGCTGGTTACATGAACGTAACTGTAGCGTTCGTTATTGGTATGGTAGGTTGGGCCTATATTCTGTACGAAATCTTTGCTGGTGAAGCTGGTAAAGTTGCTGCAGAAAAAGCCTCACCTGCTGTAGCATCAGCCTATTCAACAATGCGTTGGATTGTGACCATT LITVPLLMIEFYLILRAITNVSGGIFWRLTIGTLVMLIGGYLGEAGYMNVTVAFVIGMVGWAYILYEIFAGEAGKVAAEKASPAVASAYSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCATTGCTGATGATCGAATTCTATCTGATTTTGCGTGCG---------ATT---ACCAACGTTTCAGGC---GGCATA------------------------------------TTCTGGCGC---TTGACGATCGGTACATTGGTAATGCTAATCGGTGGTTACTTGGGCGAA---------GCT------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACGTA------------------ACTGTAGCG---TTCGTTATTGGTATGGTAGGTTGGGCCTATATTCTGTACGAAATC---------------TTT------GCT---GGTGAAGCTGGTAAAGTTGCTGCAGAA------AAA---GCCTCACCTGCTGTA---GCA---TCA---GCC---TAT---TCA---ACAATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GI------------FWR-LTIGTLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TVA-FVIGMVGWAYILYEI-----F--A-GEAGKVAAE--K-ASPAV-A-S-A-Y-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-SAR116/Himb100]_KJ927320 [III-Alpha1-SAR116/Himb100] PRGD_OTU008a_23950e547154c8a0847893072507f90b gb|KJ927320| PRGD_OTU008a_23950e547154c8a0847893072507f90b, putative proteorhodopsin gene, partial cds. PRGD_OTU008a_23950e547154c8a0847893072507f90b, putative proteorhodopsin gene, partial cds. KJ927320 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/SAR116 Himb100-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 SAR116 Himb100-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) TTGATCACAGTTCCATTGCTGATGATCGAATTCTATCTGATTTTGCGTGCGATTACCAACGTATCAGGCGGCATATTCTGGCGCTTGACCATCGGTACATTAGTAATGCTAATCGGTGGTTACTTGGGCGAAGCGGGTTACATGAACGTAACTGTAGCGTTTGTTATTGGTATGGTAGGTTGGGCCTACATTCTGTATGAAATCTTTGCTGGTGAAGCTGGTAAAGTTGCTGCAGAAAAAGCCTCACCTGCTGTAGCATCAGCCTATTCAACAATGCGTTGGATTGTGACCATT LITVPLLMIEFYLILRAITNVSGGIFWRLTIGTLVMLIGGYLGEAGYMNVTVAFVIGMVGWAYILYEIFAGEAGKVAAEKASPAVASAYSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTTCCATTGCTGATGATCGAATTCTATCTGATTTTGCGTGCG---------ATT---ACCAACGTATCAGGC---GGCATA------------------------------------TTCTGGCGC---TTGACCATCGGTACATTAGTAATGCTAATCGGTGGTTACTTGGGCGAA---------GCG------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACGTA------------------ACTGTAGCG---TTTGTTATTGGTATGGTAGGTTGGGCCTACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGTAAAGTTGCTGCAGAA------AAA---GCCTCACCTGCTGTA---GCA---TCA---GCC---TAT---TCA---ACAATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GI------------FWR-LTIGTLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TVA-FVIGMVGWAYILYEI-----F--A-GEAGKVAAE--K-ASPAV-A-S-A-Y-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-SAR116/Himb100]_KJ927319 [III-Alpha1-SAR116/Himb100] PRGD_OTU008a_1f254f7f99dd6abfd06a876966422c50 gb|KJ927319| PRGD_OTU008a_1f254f7f99dd6abfd06a876966422c50, putative proteorhodopsin gene, partial cds. PRGD_OTU008a_1f254f7f99dd6abfd06a876966422c50, putative proteorhodopsin gene, partial cds. KJ927319 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/SAR116 Himb100-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 SAR116 Himb100-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACAGTGCCATTGCTGATGATCGAGTTCTACTTGATTTTGCGTGCGATTACCAACGTATCAGGCGGCGTTTTCTGGCGTTTGACTATCGGTTCGCTGGTAATGCTTATCGGTGGTTACTTGGGTGAAGCGGGTTACATGAATGTAACTTTAGCCTTTGCTATCGGTATGGTAGGTTGGGCCTACATTCTGTATGAAATCTTTGCTGGCGAAGCTGGTAAAGTTGCAGCAGAAAAAGCAGCACCTGCAGTAGCTTCAGCTTATTCAACAATGCGTTGGATTGTAACCATT LITVPLLMIEFYLILRAITNVSGGVFWRLTIGSLVMLIGGYLGEAGYMNVTLAFAIGMVGWAYILYEIFAGEAGKVAAEKAAPAVASAYSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCATTGCTGATGATCGAGTTCTACTTGATTTTGCGTGCG---------ATT---ACCAACGTATCAGGC---GGCGTT------------------------------------TTCTGGCGT---TTGACTATCGGTTCGCTGGTAATGCTTATCGGTGGTTACTTGGGTGAA---------GCG------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTTTAGCC---TTTGCTATCGGTATGGTAGGTTGGGCCTACATTCTGTATGAAATC---------------TTT------GCT---GGCGAAGCTGGTAAAGTTGCAGCAGAA------AAA---GCAGCACCTGCAGTA---GCT---TCA---GCT---TAT---TCA---ACAATG---CGTTGGATTGTAACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LTIGSLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TLA-FAIGMVGWAYILYEI-----F--A-GEAGKVAAE--K-AAPAV-A-S-A-Y-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-SAR116/Himb100]_KJ927327 [III-Alpha1-SAR116/Himb100] PRGD_OTU008a_6bf8979105ffa1a9af89a2858c9331bf gb|KJ927327| PRGD_OTU008a_6bf8979105ffa1a9af89a2858c9331bf, putative proteorhodopsin gene, partial cds. PRGD_OTU008a_6bf8979105ffa1a9af89a2858c9331bf, putative proteorhodopsin gene, partial cds. KJ927327 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/SAR116 Himb100-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 SAR116 Himb100-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACAGTGCCATTGCTGATGATCGAGTTCTATCTGATTTTGCGTGCGATTACCAACGTATCAGGCGGCGTTTTCTGGCGTTTGACTATCGGTTCGCTGGTAATGCTTATCGGTGGTTACTTGGGTGAAGCGGGTTACATGAATGTAACTTTAGCCTTTGCTATCGGTATGGTAGGTTGGGCCTACATTCTGTATGAAATCTTTGCTGGCGAAGCTGGTAAAGTTGCAGCAGAAAAAGCAGCACCTGCAGTAGCTTCAGCTTATTCAACAATGCGTTGGATTGTAACCATT LITVPLLMIEFYLILRAITNVSGGVFWRLTIGSLVMLIGGYLGEAGYMNVTLAFAIGMVGWAYILYEIFAGEAGKVAAEKAAPAVASAYSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCATTGCTGATGATCGAGTTCTATCTGATTTTGCGTGCG---------ATT---ACCAACGTATCAGGC---GGCGTT------------------------------------TTCTGGCGT---TTGACTATCGGTTCGCTGGTAATGCTTATCGGTGGTTACTTGGGTGAA---------GCG------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTTTAGCC---TTTGCTATCGGTATGGTAGGTTGGGCCTACATTCTGTATGAAATC---------------TTT------GCT---GGCGAAGCTGGTAAAGTTGCAGCAGAA------AAA---GCAGCACCTGCAGTA---GCT---TCA---GCT---TAT---TCA---ACAATG---CGTTGGATTGTAACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LTIGSLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TLA-FAIGMVGWAYILYEI-----F--A-GEAGKVAAE--K-AAPAV-A-S-A-Y-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-SAR116/Himb100]_KJ927324 [III-Alpha1-SAR116/Himb100] PRGD_OTU008a_3c7ca75caff05bcb35ac37563ffb2398 gb|KJ927324| PRGD_OTU008a_3c7ca75caff05bcb35ac37563ffb2398, putative proteorhodopsin gene, partial cds. PRGD_OTU008a_3c7ca75caff05bcb35ac37563ffb2398, putative proteorhodopsin gene, partial cds. KJ927324 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/SAR116 Himb100-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 SAR116 Himb100-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACAGTGCCATTGCTGATGATTGAGTTCTATCTGATTTTGCGTGCGATTACCAACGTATCAGGTGGCGTTTTCTGGCGTTTGACTATCGGTTCGCTGGTAATGCTTATCGGTGGTTACTTGGGTGAAGCGGGTTACATGAATGTAACTTTAGCCTTTGCTATCGGTATGGTAGGTTGGGCCTACATTCTGTATGAAATCTTTGCTGGCGAAGCTGGTAAAGTTGCAGCAGAAAAAGCAGCACCTGCAGTAGCTTCAGCTTATTCAACAATGCGTTGGATTGTAACCATT LITVPLLMIEFYLILRAITNVSGGVFWRLTIGSLVMLIGGYLGEAGYMNVTLAFAIGMVGWAYILYEIFAGEAGKVAAEKAAPAVASAYSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCATTGCTGATGATTGAGTTCTATCTGATTTTGCGTGCG---------ATT---ACCAACGTATCAGGT---GGCGTT------------------------------------TTCTGGCGT---TTGACTATCGGTTCGCTGGTAATGCTTATCGGTGGTTACTTGGGTGAA---------GCG------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTTTAGCC---TTTGCTATCGGTATGGTAGGTTGGGCCTACATTCTGTATGAAATC---------------TTT------GCT---GGCGAAGCTGGTAAAGTTGCAGCAGAA------AAA---GCAGCACCTGCAGTA---GCT---TCA---GCT---TAT---TCA---ACAATG---CGTTGGATTGTAACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LTIGSLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TLA-FAIGMVGWAYILYEI-----F--A-GEAGKVAAE--K-AAPAV-A-S-A-Y-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-SAR116/Himb100]_KJ927333 [III-Alpha1-SAR116/Himb100] PRGD_OTU008a_9b4822ab560a4771d5b95f3a28465663 gb|KJ927333| PRGD_OTU008a_9b4822ab560a4771d5b95f3a28465663, putative proteorhodopsin gene, partial cds. PRGD_OTU008a_9b4822ab560a4771d5b95f3a28465663, putative proteorhodopsin gene, partial cds. KJ927333 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/SAR116 Himb100-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 SAR116 Himb100-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) TTGATCACAGTGCCATTGCTGATGATCGAGTTCTATCTGATTTTGCGTGCGATTACCAACGTGTCAGGCGGCGTTTTCTGGCGTTTGACTATTGGTTCGCTGGTAATGCTTATCGGTGGTTACTTGGGCGAAGCGGGTTACATGAATGTAACTTTAGCCTTTGCTATCGGTATGGTAGGTTGGGCCTACATTCTGTATGAAATCTTTGCTGGCGAAGCTGGTAAAGTTGCAGCAGAAAAAGCAGCACCTGCAGTAGCTTCAGCCTATTCAACAATGCGTTGGATTGTAACCATT LITVPLLMIEFYLILRAITNVSGGVFWRLTIGSLVMLIGGYLGEAGYMNVTLAFAIGMVGWAYILYEIFAGEAGKVAAEKAAPAVASAYSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCATTGCTGATGATCGAGTTCTATCTGATTTTGCGTGCG---------ATT---ACCAACGTGTCAGGC---GGCGTT------------------------------------TTCTGGCGT---TTGACTATTGGTTCGCTGGTAATGCTTATCGGTGGTTACTTGGGCGAA---------GCG------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTTTAGCC---TTTGCTATCGGTATGGTAGGTTGGGCCTACATTCTGTATGAAATC---------------TTT------GCT---GGCGAAGCTGGTAAAGTTGCAGCAGAA------AAA---GCAGCACCTGCAGTA---GCT---TCA---GCC---TAT---TCA---ACAATG---CGTTGGATTGTAACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LTIGSLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TLA-FAIGMVGWAYILYEI-----F--A-GEAGKVAAE--K-AAPAV-A-S-A-Y-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-SAR116/Himb100]_KJ927331 [III-Alpha1-SAR116/Himb100] PRGD_OTU008a_8ae07d3fc991ab379631a2dcebba8aab gb|KJ927331| PRGD_OTU008a_8ae07d3fc991ab379631a2dcebba8aab, putative proteorhodopsin gene, partial cds. PRGD_OTU008a_8ae07d3fc991ab379631a2dcebba8aab, putative proteorhodopsin gene, partial cds. KJ927331 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/SAR116 Himb100-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 SAR116 Himb100-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTGATCACAGTGCCATTGCTGATGATCGAATTCTATCTGATTTTGCGTGCGATTACCAACGTATCAGGCGGCGTTTTCTGGCGTTTGACTATCGGTTCGCTGGTAATGCTTATCGGTGGTTACTTGGGTGAAGCGGGTTACATGAATGTAACTTTAGCCTTTGCTATCGGTATGGTAGGTTGGGCCTACATTCTGTATGAAATCTTTGCTGGCGAAGCTGGTAAAGTTGCAGCAGAAAAAGCAGCACCTGCAGTAGCTTCAGCCTATTCAACAATGCGTTGGATTGTAACCATT LITVPLLMIEFYLILRAITNVSGGVFWRLTIGSLVMLIGGYLGEAGYMNVTLAFAIGMVGWAYILYEIFAGEAGKVAAEKAAPAVASAYSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCATTGCTGATGATCGAATTCTATCTGATTTTGCGTGCG---------ATT---ACCAACGTATCAGGC---GGCGTT------------------------------------TTCTGGCGT---TTGACTATCGGTTCGCTGGTAATGCTTATCGGTGGTTACTTGGGTGAA---------GCG------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTTTAGCC---TTTGCTATCGGTATGGTAGGTTGGGCCTACATTCTGTATGAAATC---------------TTT------GCT---GGCGAAGCTGGTAAAGTTGCAGCAGAA------AAA---GCAGCACCTGCAGTA---GCT---TCA---GCC---TAT---TCA---ACAATG---CGTTGGATTGTAACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LTIGSLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TLA-FAIGMVGWAYILYEI-----F--A-GEAGKVAAE--K-AAPAV-A-S-A-Y-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-SAR116/Himb100]_KJ927332 [III-Alpha1-SAR116/Himb100] PRGD_OTU008a_924835e31f1a6109bfa80c9eed1baa5f gb|KJ927332| PRGD_OTU008a_924835e31f1a6109bfa80c9eed1baa5f, putative proteorhodopsin gene, partial cds. PRGD_OTU008a_924835e31f1a6109bfa80c9eed1baa5f, putative proteorhodopsin gene, partial cds. KJ927332 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/SAR116 Himb100-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 SAR116 Himb100-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATCACAGTGCCATTGCTGATGATCGAATTCTATCTGATTTTGCGTGCGATTACCAACGTTTCAGGTGGTATCTTTTGGCGTTTGACCATCGGTACACTGGTAATGCTAATCGGTGGTTATCTGGGCGAAGCTGGTTACATGAATGTAACACTGGCATTCGTTATCGGCATGGTAGGTTGGGCCTACATTCTGTATGAAATCTTTGCTGGTGAAGCTGGCAAAGTTGCTGCAGAAAAAGCGTCACCTGCTGTGGCATCAGCCTATTCAACAATGCGTTGGATTGTGACCATT LITVPLLMIEFYLILRAITNVSGGIFWRLTIGTLVMLIGGYLGEAGYMNVTLAFVIGMVGWAYILYEIFAGEAGKVAAEKASPAVASAYSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTGCCATTGCTGATGATCGAATTCTATCTGATTTTGCGTGCG---------ATT---ACCAACGTTTCAGGT---GGTATC------------------------------------TTTTGGCGT---TTGACCATCGGTACACTGGTAATGCTAATCGGTGGTTATCTGGGCGAA---------GCT------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTGGCA---TTCGTTATCGGCATGGTAGGTTGGGCCTACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCAAAGTTGCTGCAGAA------AAA---GCGTCACCTGCTGTG---GCA---TCA---GCC---TAT---TCA---ACAATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GI------------FWR-LTIGTLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TLA-FVIGMVGWAYILYEI-----F--A-GEAGKVAAE--K-ASPAV-A-S-A-Y-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-SAR116/Himb100]_KJ927325 [III-Alpha1-SAR116/Himb100] PRGD_OTU008a_41944cfd0122ec8ed703642e06c13379 gb|KJ927325| PRGD_OTU008a_41944cfd0122ec8ed703642e06c13379, putative proteorhodopsin gene, partial cds. PRGD_OTU008a_41944cfd0122ec8ed703642e06c13379, putative proteorhodopsin gene, partial cds. KJ927325 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/SAR116 Himb100-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 SAR116 Himb100-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTGATTACTGTGCCACTGCTGATGATTGAGTTTTATCTGGTACTGCGGGCGATTACAAATGTATCAGGCGGCGTCTTCTGGCGTCTGACCATCGGTACTCTGGTCATGCTGATCGGTGGTTACCTTGGTGAAGCCGGTTACATGAACGTAACTCTGGGCTTTGTCATTGGTATGGTCGGTTGGGCCTACATTCTGTATGAAATCTTTGCTGGTGAAGCTGGCAAGGTGGCTGCAGAACATGCAAAGCCATCAGTACAGTCTGCCTATTCAACCATGCGCTGGATTGTAACCATC LITVPLLMIEFYLVLRAITNVSGGVFWRLTIGTLVMLIGGYLGEAGYMNVTLGFVIGMVGWAYILYEIFAGEAGKVAAEHAKPSVQSAYSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTGCCACTGCTGATGATTGAGTTTTATCTGGTACTGCGGGCG---------ATT---ACAAATGTATCAGGC---GGCGTC------------------------------------TTCTGGCGT---CTGACCATCGGTACTCTGGTCATGCTGATCGGTGGTTACCTTGGTGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACGTA------------------ACTCTGGGC---TTTGTCATTGGTATGGTCGGTTGGGCCTACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTGGCTGCAGAA------CAT---GCAAAGCCATCAGTA---CAG---TCT---GCC---TAT---TCA---ACCATG---CGCTGGATTGTAACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLVLRA---I-TNVSG-GV------------FWR-LTIGTLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TLG-FVIGMVGWAYILYEI-----F--A-GEAGKVAAE--H-AKPSV-Q-S-A-Y-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-SAR116/Himb100]_KJ927317 [III-Alpha1-SAR116/Himb100] PRGD_OTU008a_16c057d00e8dbaa1709ea3245956bd42 gb|KJ927317| PRGD_OTU008a_16c057d00e8dbaa1709ea3245956bd42, putative proteorhodopsin gene, partial cds. PRGD_OTU008a_16c057d00e8dbaa1709ea3245956bd42, putative proteorhodopsin gene, partial cds. KJ927317 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/SAR116 Himb100-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 SAR116 Himb100-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (33.935, 18.508), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATCACAGTGCCATTGCTGATGATCGAGTTCTATCTGATTTTGCGTGCTATTACCAACGTATCAGGCGGCGTTTTCTGGCGCTTGACCATCGGTACATTGGTCATGCTGATCGGTGGTTACTTGGGCGAAGCAGGTTACATTAATGTAACTCTAGGCTTTGTTATCGGTATGGTAGGTTGGGCATACATCCTCTATGAAATCTTTGCTGGTGAAGCTGGCAAGATCGCAGCAGAGAAAGCCTCACCTGCAGTGGCTTCAGCCTATTCAACAATGCGTTGGATTGTGACCATT LITVPLLMIEFYLILRAITNVSGGVFWRLTIGTLVMLIGGYLGEAGYINVTLGFVIGMVGWAYILYEIFAGEAGKIAAEKASPAVASAYSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCATTGCTGATGATCGAGTTCTATCTGATTTTGCGTGCT---------ATT---ACCAACGTATCAGGC---GGCGTT------------------------------------TTCTGGCGC---TTGACCATCGGTACATTGGTCATGCTGATCGGTGGTTACTTGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATT------------------------------------------------------------------AATGTA------------------ACTCTAGGC---TTTGTTATCGGTATGGTAGGTTGGGCATACATCCTCTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCAAGATCGCAGCAGAG------AAA---GCCTCACCTGCAGTG---GCT---TCA---GCC---TAT---TCA---ACAATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LTIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NV------TLG-FVIGMVGWAYILYEI-----F--A-GEAGKIAAE--K-ASPAV-A-S-A-Y-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-SAR116/Himb100]_KJ927330 [III-Alpha1-SAR116/Himb100] PRGD_OTU008a_852fb95f944a8ab819a00c7af88f863d gb|KJ927330| PRGD_OTU008a_852fb95f944a8ab819a00c7af88f863d, putative proteorhodopsin gene, partial cds. PRGD_OTU008a_852fb95f944a8ab819a00c7af88f863d, putative proteorhodopsin gene, partial cds. KJ927330 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/SAR116 Himb100-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 SAR116 Himb100-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683) TTGATCACAGTGCCATTGCTGATGATCGAGTTCTATCTGATTTTGCGTGCTATTACCAACGTATCAGGCGGCGTTTTCTGGCGCTTGACCATCGGTACATTGGTCATGCTGATCGGAGGTTACTTGGGCGAAGCAGGTTACATCAATGTAACTCTAGGCTTTGTTATCGGTATGGTAGGTTGGGCATACATCCTGTATGAAATCTTTGCTGGTGAAGCTGGCAAGATCGCAGCAGAGAAAGCCTCACCTGCAGTGGCTTCAGCCTATTCGACAATGCGTTGGATTGTGACCATT LITVPLLMIEFYLILRAITNVSGGVFWRLTIGTLVMLIGGYLGEAGYINVTLGFVIGMVGWAYILYEIFAGEAGKIAAEKASPAVASAYSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCATTGCTGATGATCGAGTTCTATCTGATTTTGCGTGCT---------ATT---ACCAACGTATCAGGC---GGCGTT------------------------------------TTCTGGCGC---TTGACCATCGGTACATTGGTCATGCTGATCGGAGGTTACTTGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATC------------------------------------------------------------------AATGTA------------------ACTCTAGGC---TTTGTTATCGGTATGGTAGGTTGGGCATACATCCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCAAGATCGCAGCAGAG------AAA---GCCTCACCTGCAGTG---GCT---TCA---GCC---TAT---TCG---ACAATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LTIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NV------TLG-FVIGMVGWAYILYEI-----F--A-GEAGKIAAE--K-ASPAV-A-S-A-Y-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-SAR116/Himb100]_KJ927338 [III-Alpha1-SAR116/Himb100] PRGD_OTU008a_fb324cc044717ef418d933c6dafa24c5 gb|KJ927338| PRGD_OTU008a_fb324cc044717ef418d933c6dafa24c5, putative proteorhodopsin gene, partial cds. PRGD_OTU008a_fb324cc044717ef418d933c6dafa24c5, putative proteorhodopsin gene, partial cds. KJ927338 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/SAR116 Himb100-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 SAR116 Himb100-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTGATCACAGTGCCATTGCTGATGATAGAGTTCTATCTGATTCTGCGTGCGATTACCAACGTATCAGGCGGCGTTTTCTGGCGCTTGACCATCGGTACATTGGTCATGCTGATCGGTGGTTACTTGGGCGAAGCAGGTTACATGAATGTAACTCTAGGCTTTGTTATCGGTATGGTAGGTTGGGCATACATCCTGTATGAAATCTTTGCTGGTGAAGCTGGCAAGATCGCAGCAGAGAAAGCCTCACCTGCAGTGGCTTCAGCCTATTCAACAATGCGTTGGATTGTGACCATT LITVPLLMIEFYLILRAITNVSGGVFWRLTIGTLVMLIGGYLGEAGYMNVTLGFVIGMVGWAYILYEIFAGEAGKIAAEKASPAVASAYSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCATTGCTGATGATAGAGTTCTATCTGATTCTGCGTGCG---------ATT---ACCAACGTATCAGGC---GGCGTT------------------------------------TTCTGGCGC---TTGACCATCGGTACATTGGTCATGCTGATCGGTGGTTACTTGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGGC---TTTGTTATCGGTATGGTAGGTTGGGCATACATCCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCAAGATCGCAGCAGAG------AAA---GCCTCACCTGCAGTG---GCT---TCA---GCC---TAT---TCA---ACAATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LTIGTLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TLG-FVIGMVGWAYILYEI-----F--A-GEAGKIAAE--K-ASPAV-A-S-A-Y-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-SAR116/Himb100]_KJ927322 [III-Alpha1-SAR116/Himb100] PRGD_OTU008a_2dfa0e0eabd9afce45ec803bc2f9eef5 gb|KJ927322| PRGD_OTU008a_2dfa0e0eabd9afce45ec803bc2f9eef5, putative proteorhodopsin gene, partial cds. PRGD_OTU008a_2dfa0e0eabd9afce45ec803bc2f9eef5, putative proteorhodopsin gene, partial cds. KJ927322 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/SAR116 Himb100-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 SAR116 Himb100-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175) TTGATCACAGTGCCATTGCTGATGATCGAGTTCTATCTGATTTTGCGTGCGATTACCAACGTATCAGGCGGCGTTTTCTGGCGCTTGACCATCGGTACATTGGTCATGCTGATCGGTGGTTACTTGGGCGAAGCAGGTTACATAAACGTAACTCTAGGCTTTGTTATCGGTATGGTAGGTTGGGCATACATCCTGTATGAAATCTTTGCTGGTGAAGCTGGCAAGATTGCAGCAGAGAATGCCTCACCTGCAGTGGCTTCAGCCTATTCAACAATGCGTTGGATCGTGACCATC LITVPLLMIEFYLILRAITNVSGGVFWRLTIGTLVMLIGGYLGEAGYINVTLGFVIGMVGWAYILYEIFAGEAGKIAAENASPAVASAYSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCATTGCTGATGATCGAGTTCTATCTGATTTTGCGTGCG---------ATT---ACCAACGTATCAGGC---GGCGTT------------------------------------TTCTGGCGC---TTGACCATCGGTACATTGGTCATGCTGATCGGTGGTTACTTGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AACGTA------------------ACTCTAGGC---TTTGTTATCGGTATGGTAGGTTGGGCATACATCCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCAAGATTGCAGCAGAG------AAT---GCCTCACCTGCAGTG---GCT---TCA---GCC---TAT---TCA---ACAATG---CGTTGGATCGTGACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LTIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NV------TLG-FVIGMVGWAYILYEI-----F--A-GEAGKIAAE--N-ASPAV-A-S-A-Y-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-SAR116/Himb100]_KJ927336 [III-Alpha1-SAR116/Himb100] PRGD_OTU008a_e14285ec2b0a44ececb132b7e670705c gb|KJ927336| PRGD_OTU008a_e14285ec2b0a44ececb132b7e670705c, putative proteorhodopsin gene, partial cds. PRGD_OTU008a_e14285ec2b0a44ececb132b7e670705c, putative proteorhodopsin gene, partial cds. KJ927336 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/SAR116 Himb100-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 SAR116 Himb100-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683) TTGATCACAGTGCCATTGCTGATGATCGAATTCTATCTGATTTTGCGTGCGATTACCAACGTATCAGGCGGCGTTTTCTGGCGCTTGACCATCGGTACATTGGTCATGCTGATCGGTGGTTACTTGGGCGAAGCAGGTTACATAAACGTAACTTTAGGCTTTGTTATCGGTATGGTAGGTTGGGCATACATCCTGTATGAAATCTTTGCTGGTGAAGCTGGCAAGATTGCAGCAGAGAAAGCCTCACCTGCAGTGGCTTCAGCCTATTCAACAATGCGTTGGATTGTGACCATT LITVPLLMIEFYLILRAITNVSGGVFWRLTIGTLVMLIGGYLGEAGYINVTLGFVIGMVGWAYILYEIFAGEAGKIAAEKASPAVASAYSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCATTGCTGATGATCGAATTCTATCTGATTTTGCGTGCG---------ATT---ACCAACGTATCAGGC---GGCGTT------------------------------------TTCTGGCGC---TTGACCATCGGTACATTGGTCATGCTGATCGGTGGTTACTTGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AACGTA------------------ACTTTAGGC---TTTGTTATCGGTATGGTAGGTTGGGCATACATCCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCAAGATTGCAGCAGAG------AAA---GCCTCACCTGCAGTG---GCT---TCA---GCC---TAT---TCA---ACAATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LTIGTLVMLIGGYLGE---A------G--Y-----------I----------------------NV------TLG-FVIGMVGWAYILYEI-----F--A-GEAGKIAAE--K-ASPAV-A-S-A-Y-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-SAR116/Himb100]_KJ927326 [III-Alpha1-SAR116/Himb100] PRGD_OTU008a_57ecb8d1d964ec10737a0d0852a6c223 gb|KJ927326| PRGD_OTU008a_57ecb8d1d964ec10737a0d0852a6c223, putative proteorhodopsin gene, partial cds. PRGD_OTU008a_57ecb8d1d964ec10737a0d0852a6c223, putative proteorhodopsin gene, partial cds. KJ927326 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/SAR116 Himb100-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 SAR116 Himb100-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (72.0542, -130.8781; ; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) TTGATCACAGTGCCATTGCTGATGATCGAGTTTTATCTGATTCTGCGTGCGATTACCAACGTATCAGGCGGCGTTTTCTGGCGCTTGACCATCGGTACATTGGTCATGCTGATCGGTGGTTACTTGGGCGAAGCAGGTTACATGAATGTAACTCTAGGCTTTGTTATCGGTATGGTAGGTTGGGCATACATCCTGTATGAAATCTTTGCTGGTGAAGCTGGCAAGATTGCAGCAGAGAAAGCCTCACCTGCAGTGGCTTCAGCCTATTCAACAATGCGTTGGATTGTGACCATT LITVPLLMIEFYLILRAITNVSGGVFWRLTIGTLVMLIGGYLGEAGYMNVTLGFVIGMVGWAYILYEIFAGEAGKIAAEKASPAVASAYSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCATTGCTGATGATCGAGTTTTATCTGATTCTGCGTGCG---------ATT---ACCAACGTATCAGGC---GGCGTT------------------------------------TTCTGGCGC---TTGACCATCGGTACATTGGTCATGCTGATCGGTGGTTACTTGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGGC---TTTGTTATCGGTATGGTAGGTTGGGCATACATCCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCAAGATTGCAGCAGAG------AAA---GCCTCACCTGCAGTG---GCT---TCA---GCC---TAT---TCA---ACAATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LTIGTLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TLG-FVIGMVGWAYILYEI-----F--A-GEAGKIAAE--K-ASPAV-A-S-A-Y-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-SAR116/Himb100]_KJ927334 [III-Alpha1-SAR116/Himb100] PRGD_OTU008a_c9c224f71c18507056a5e396d99291c2 gb|KJ927334| PRGD_OTU008a_c9c224f71c18507056a5e396d99291c2, putative proteorhodopsin gene, partial cds. PRGD_OTU008a_c9c224f71c18507056a5e396d99291c2, putative proteorhodopsin gene, partial cds. KJ927334 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/SAR116 Himb100-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 SAR116 Himb100-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -33.28, 45.35) TTGATAACAGTGCCATTGCTGATGATCGAGTTTTATCTGATTCTGCGTGCGATTACCAACGTATCAGGCGGCGTTTTCTGGCGCTTGACCATCGGTACATTGGTCATGCTGATCGGTGGTTACTTGGGCGAAGCAGGTTACATGAATGTAACTCTAGGCTTTGTAATCGGTATGGTAGGTTGGGCATACATCCTGTATGAAATCTTTGCTGGTGAAGCTGGCAAGATTGCAGCAGAGAAAGCCTCACCTGCAGTGGCTTCAGCCTATTCAACAATGCGTTGGATCGTGACCATT LITVPLLMIEFYLILRAITNVSGGVFWRLTIGTLVMLIGGYLGEAGYMNVTLGFVIGMVGWAYILYEIFAGEAGKIAAEKASPAVASAYSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACAGTGCCATTGCTGATGATCGAGTTTTATCTGATTCTGCGTGCG---------ATT---ACCAACGTATCAGGC---GGCGTT------------------------------------TTCTGGCGC---TTGACCATCGGTACATTGGTCATGCTGATCGGTGGTTACTTGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTCTAGGC---TTTGTAATCGGTATGGTAGGTTGGGCATACATCCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCAAGATTGCAGCAGAG------AAA---GCCTCACCTGCAGTG---GCT---TCA---GCC---TAT---TCA---ACAATG---CGTTGGATCGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LTIGTLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TLG-FVIGMVGWAYILYEI-----F--A-GEAGKIAAE--K-ASPAV-A-S-A-Y-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-SAR116/Himb100]_KJ927315 [III-Alpha1-SAR116/Himb100] PRGD_OTU008a_0d983c8a1384002fe92c5bab6f38062b gb|KJ927315| PRGD_OTU008a_0d983c8a1384002fe92c5bab6f38062b, putative proteorhodopsin gene, partial cds. PRGD_OTU008a_0d983c8a1384002fe92c5bab6f38062b, putative proteorhodopsin gene, partial cds. KJ927315 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/SAR116 Himb100-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 SAR116 Himb100-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Mediterranean Sea (33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTGATCACAGTGCCATTGCTGATGATCGAGTTCTATCTGATTCTGCGTGCGATCACGAATGTATCAGGCGGCATTTTCTGGCGCTTGACCATTGGTACTCTGGTCATGCTGATCGGTGGTTACTTGGGCGAAGCCGGTTACATGAACGTAACACTGGGCTTCGTTATCGGTATGGTCGGTTGGGCATATATCCTGTATGAAATCTTTGCTGGTGAAGCTGGCAAGGTTGCAGCAGAGAAAGCCTCACCTGCAGTGGCATCAGCATATTCAACAATGCGTTGGATTGTGACCATT LITVPLLMIEFYLILRAITNVSGGIFWRLTIGTLVMLIGGYLGEAGYMNVTLGFVIGMVGWAYILYEIFAGEAGKVAAEKASPAVASAYSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCATTGCTGATGATCGAGTTCTATCTGATTCTGCGTGCG---------ATC---ACGAATGTATCAGGC---GGCATT------------------------------------TTCTGGCGC---TTGACCATTGGTACTCTGGTCATGCTGATCGGTGGTTACTTGGGCGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACGTA------------------ACACTGGGC---TTCGTTATCGGTATGGTCGGTTGGGCATATATCCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTTGCAGCAGAG------AAA---GCCTCACCTGCAGTG---GCA---TCA---GCA---TAT---TCA---ACAATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GI------------FWR-LTIGTLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TLG-FVIGMVGWAYILYEI-----F--A-GEAGKVAAE--K-ASPAV-A-S-A-Y-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-SAR116/Himb100]_KJ927329 [III-Alpha1-SAR116/Himb100] PRGD_OTU008a_844e523b24dd4859025e82b32e434989 gb|KJ927329| PRGD_OTU008a_844e523b24dd4859025e82b32e434989, putative proteorhodopsin gene, partial cds. PRGD_OTU008a_844e523b24dd4859025e82b32e434989, putative proteorhodopsin gene, partial cds. KJ927329 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/SAR116 Himb100-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 SAR116 Himb100-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATTACAGTGCCATTGTTGATGATCGAGTTCTATCTAATTCTGCGTGCGATTACGAATGTATCAGGCGGAATTTTCTGGCGCTTGACCATTGGTACTCTGGTCATGCTGATCGGTGGTTACCTCGGCGAAGCCGGTTACATGAACGTAACACTCGGCTTTGTTATCGGTATGGTCGGTTGGGCATACATTCTGTATGAAATCTTTGCTGGTGAAGCTGGCAAGGTTGCAGCAGAGAAAGCCTCACCTGCAGTGGCGTCAGCATATTCGACGATGCGTTGGATTGTGACCATT LITVPLLMIEFYLILRAITNVSGGIFWRLTIGTLVMLIGGYLGEAGYMNVTLGFVIGMVGWAYILYEIFAGEAGKVAAEKASPAVASAYSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACAGTGCCATTGTTGATGATCGAGTTCTATCTAATTCTGCGTGCG---------ATT---ACGAATGTATCAGGC---GGAATT------------------------------------TTCTGGCGC---TTGACCATTGGTACTCTGGTCATGCTGATCGGTGGTTACCTCGGCGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACGTA------------------ACACTCGGC---TTTGTTATCGGTATGGTCGGTTGGGCATACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTTGCAGCAGAG------AAA---GCCTCACCTGCAGTG---GCG---TCA---GCA---TAT---TCG---ACGATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GI------------FWR-LTIGTLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TLG-FVIGMVGWAYILYEI-----F--A-GEAGKVAAE--K-ASPAV-A-S-A-Y-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-SAR116/Himb100]_KJ927316 [III-Alpha1-SAR116/Himb100] PRGD_OTU008a_1253f3c7b4c6e290b5a71126515c8952 gb|KJ927316| PRGD_OTU008a_1253f3c7b4c6e290b5a71126515c8952, putative proteorhodopsin gene, partial cds. PRGD_OTU008a_1253f3c7b4c6e290b5a71126515c8952, putative proteorhodopsin gene, partial cds. KJ927316 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/SAR116 Himb100-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 SAR116 Himb100-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) TTGATCACAGTGCCATTGCTGATGATCGAGTTCTATCTGATTCTGCGTGCGATTACAAATGTATCAGGCGGCATTTTCTGGCGCTTGACCATTGGTACTCTGGTCATGCTGATCGGTGGTTACTTGGGCGAAGCCGGTTACATGAACGTAACACTGGGCTTTGTTATCGGTATGGTCGGTTGGGCATACATCCTGTATGAAATCTTTGCTGGTGAAGCTGGCAAGGTTGCAGCAGAGAAAGCCTCACCTGCAGTGGCATCAGCATATTCAACAATGCGTTGGATTGTGACCATT LITVPLLMIEFYLILRAITNVSGGIFWRLTIGTLVMLIGGYLGEAGYMNVTLGFVIGMVGWAYILYEIFAGEAGKVAAEKASPAVASAYSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCATTGCTGATGATCGAGTTCTATCTGATTCTGCGTGCG---------ATT---ACAAATGTATCAGGC---GGCATT------------------------------------TTCTGGCGC---TTGACCATTGGTACTCTGGTCATGCTGATCGGTGGTTACTTGGGCGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACGTA------------------ACACTGGGC---TTTGTTATCGGTATGGTCGGTTGGGCATACATCCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTTGCAGCAGAG------AAA---GCCTCACCTGCAGTG---GCA---TCA---GCA---TAT---TCA---ACAATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GI------------FWR-LTIGTLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TLG-FVIGMVGWAYILYEI-----F--A-GEAGKVAAE--K-ASPAV-A-S-A-Y-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-SAR116/Himb100]_KJ927323 [III-Alpha1-SAR116/Himb100] PRGD_OTU008a_3107ad1dacbf1886733f77390f2f691e gb|KJ927323| PRGD_OTU008a_3107ad1dacbf1886733f77390f2f691e, putative proteorhodopsin gene, partial cds. PRGD_OTU008a_3107ad1dacbf1886733f77390f2f691e, putative proteorhodopsin gene, partial cds. KJ927323 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/SAR116 Himb100-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 SAR116 Himb100-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTGATCACAGTGCCATTGCTGATGATCGAGTTCTATCTGATTCTGCGTGCGATCACGAATGTATCAGGCGGCATTTTCTGGCGCTTGACCATTGGTACACTGGTCATGCTGATCGGTGGTTACTTGGGCGAAGCCGGTTACATGAACGTAACACTGGGCTTTGTTATCGGTATGGTCGGTTGGGCATACATCCTGTATGAAATCTTTGCTGGTGAAGCTGGCAAGGTTGCAGCAGAGAAAGCCTCACCTGCAGTGGCATCAGCATATTCAACAATGCGTTGGATTGTGACCATT LITVPLLMIEFYLILRAITNVSGGIFWRLTIGTLVMLIGGYLGEAGYMNVTLGFVIGMVGWAYILYEIFAGEAGKVAAEKASPAVASAYSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCATTGCTGATGATCGAGTTCTATCTGATTCTGCGTGCG---------ATC---ACGAATGTATCAGGC---GGCATT------------------------------------TTCTGGCGC---TTGACCATTGGTACACTGGTCATGCTGATCGGTGGTTACTTGGGCGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACGTA------------------ACACTGGGC---TTTGTTATCGGTATGGTCGGTTGGGCATACATCCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTTGCAGCAGAG------AAA---GCCTCACCTGCAGTG---GCA---TCA---GCA---TAT---TCA---ACAATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GI------------FWR-LTIGTLVMLIGGYLGE---A------G--Y-----------M----------------------NV------TLG-FVIGMVGWAYILYEI-----F--A-GEAGKVAAE--K-ASPAV-A-S-A-Y-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-SAR116/Himb100]_KJ927318 [III-Alpha1-SAR116/Himb100] PRGD_OTU008a_18e85e420c287b1434fbc5d7d5c5ce25 gb|KJ927318| PRGD_OTU008a_18e85e420c287b1434fbc5d7d5c5ce25, putative proteorhodopsin gene, partial cds. PRGD_OTU008a_18e85e420c287b1434fbc5d7d5c5ce25, putative proteorhodopsin gene, partial cds. KJ927318 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/SAR116 Himb100-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 SAR116 Himb100-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATTACAGTGCCGCTACTTATGATCGAATTCTATTTGGTCCTGCGGGCTATTACCAATGTTTCCGGCGGCGTATTCTGGCGTCTGACCATTGGTACACTGGTCATGCTAATCGGTGGTTACATGGGCGAAGCAGGTTACATGAATGTAACGCTTGGCTTTGTAATCGGTATGGTTGGTTGGGCCTACATCCTGTATGAAATCTTCGCAGGTGAAGCAGGCAAGGTAGCAGCAAATGATGCCCCTGCTTCAGTACAATCGGCCTATTCAACAATGCGCTGGATTGTGACAATT LITVPLLMIEFYLVLRAITNVSGGVFWRLTIGTLVMLIGGYMGEAGYMNVTLGFVIGMVGWAYILYEIFAGEAGKVAANDAPASVQSAYSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTGCCGCTACTTATGATCGAATTCTATTTGGTCCTGCGGGCT---------ATT---ACCAATGTTTCCGGC---GGCGTA------------------------------------TTCTGGCGT---CTGACCATTGGTACACTGGTCATGCTAATCGGTGGTTACATGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACGCTTGGC---TTTGTAATCGGTATGGTTGGTTGGGCCTACATCCTGTATGAAATC---------------TTC------GCA---GGTGAAGCAGGCAAGGTAGCAGCAAAT------GAT---GCCCCTGCTTCAGTA---CAA---TCG---GCC---TAT---TCA---ACAATG---CGCTGGATTGTGACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLVLRA---I-TNVSG-GV------------FWR-LTIGTLVMLIGGYMGE---A------G--Y-----------M----------------------NV------TLG-FVIGMVGWAYILYEI-----F--A-GEAGKVAAN--D-APASV-Q-S-A-Y-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-b]_KJ927344 [III-Alpha1-b] PRGD_OTU008b_43fa738d2fe2924b624cf7028c9bad43 gb|KJ927344| PRGD_OTU008b_43fa738d2fe2924b624cf7028c9bad43, putative proteorhodopsin gene, partial cds. PRGD_OTU008b_43fa738d2fe2924b624cf7028c9bad43, putative proteorhodopsin gene, partial cds. KJ927344 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTGATCACGGTGCCACTGCTGATGATTGAGTTCTACCTCATCCTACGGGCTATTACGAACGTATCTGGCGGCGTCTTCTGGCGTTTGTCCATCGGTACATTAGTAATGTTGGTTGGTGGTTATCTTGGCGAAGCCGGTTACATGAATGTCACTGTTGGTTTTATCATCGGTATGGCTGGTTGGGCATACATCCTGTATGAAATCTTTGCTGGTGAAGCTGGCCGGGTTGCATCAGAGCAAGCGTCTGAGTCAGTTAAGTCTGCCTTTTCAACAATGCGTTGGATTGTAACAATC LITVPLLMIEFYLILRAITNVSGGVFWRLSIGTLVMLVGGYLGEAGYMNVTVGFIIGMAGWAYILYEIFAGEAGRVASEQASESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACGGTGCCACTGCTGATGATTGAGTTCTACCTCATCCTACGGGCT---------ATT---ACGAACGTATCTGGC---GGCGTC------------------------------------TTCTGGCGT---TTGTCCATCGGTACATTAGTAATGTTGGTTGGTGGTTATCTTGGCGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTGTTGGT---TTTATCATCGGTATGGCTGGTTGGGCATACATCCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCCGGGTTGCATCAGAG------CAA---GCGTCTGAGTCAGTT---AAG---TCT---GCC---TTT---TCA---ACAATG---CGTTGGATTGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LSIGTLVMLVGGYLGE---A------G--Y-----------M----------------------NV------TVG-FIIGMAGWAYILYEI-----F--A-GEAGRVASE--Q-ASESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-b]_KJ927356 [III-Alpha1-b] PRGD_OTU008b_c70778d3492fb22233eacc0917abec12 gb|KJ927356| PRGD_OTU008b_c70778d3492fb22233eacc0917abec12, putative proteorhodopsin gene, partial cds. PRGD_OTU008b_c70778d3492fb22233eacc0917abec12, putative proteorhodopsin gene, partial cds. KJ927356 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATCACAGTGCCACTGCTGATGATTGAGTTCTACCTCATCCTACGGGCTATTACGAACGTATCTGGCGGCGTCTTCTGGCGTTTGTCCATCGGTACATTAGTAATGCTGGTTGGTGGTTATCTTGGCGAAGCCGGTTACATGAATGTCACTGTTGGTTTTATCATCGGTATGGCTGGTTGGGCATACATCCTGTATGAAATCTTTGCTGGTGAAGCTGGCCGGGTTGCATCAGAGCAAGCGTCTGAGTCAGTTAAGTCTGCCTTTTCAACAATGCGTTGGATTGTAACAATC LITVPLLMIEFYLILRAITNVSGGVFWRLSIGTLVMLVGGYLGEAGYMNVTVGFIIGMAGWAYILYEIFAGEAGRVASEQASESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTGCCACTGCTGATGATTGAGTTCTACCTCATCCTACGGGCT---------ATT---ACGAACGTATCTGGC---GGCGTC------------------------------------TTCTGGCGT---TTGTCCATCGGTACATTAGTAATGCTGGTTGGTGGTTATCTTGGCGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTGTTGGT---TTTATCATCGGTATGGCTGGTTGGGCATACATCCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCCGGGTTGCATCAGAG------CAA---GCGTCTGAGTCAGTT---AAG---TCT---GCC---TTT---TCA---ACAATG---CGTTGGATTGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LSIGTLVMLVGGYLGE---A------G--Y-----------M----------------------NV------TVG-FIIGMAGWAYILYEI-----F--A-GEAGRVASE--Q-ASESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-b]_KJ927341 [III-Alpha1-b] PRGD_OTU008b_29aadf7e747a7415a8d9952206ae5493 gb|KJ927341| PRGD_OTU008b_29aadf7e747a7415a8d9952206ae5493, putative proteorhodopsin gene, partial cds. PRGD_OTU008b_29aadf7e747a7415a8d9952206ae5493, putative proteorhodopsin gene, partial cds. KJ927341 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -33.9602, -73.3769), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) TTGATCACAGTGCCACTGCTGATGATTGAGTTCTACCTCATCCTACGGGCTATTACGAACGTATCTGGCGGCGTCTTCTGGCGTTTGTCCATCGGTACATTAGTAATGCTGGTTGGTGGTTATCTTGGCGAAGCCGGTTACATGAATGTCACTGTTGGTTTTATCATCGGTATGGCTGGTTGGGCATACATTCTGTATGAAATCTTTGCTGGTGAAGCTGGCCGGGTTGCATCAGAGCAAGCGTCTGAGTCAGTTAAGTCTGCCTTTTCAACAATGCGTTGGATTGTAACAATC LITVPLLMIEFYLILRAITNVSGGVFWRLSIGTLVMLVGGYLGEAGYMNVTVGFIIGMAGWAYILYEIFAGEAGRVASEQASESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCACTGCTGATGATTGAGTTCTACCTCATCCTACGGGCT---------ATT---ACGAACGTATCTGGC---GGCGTC------------------------------------TTCTGGCGT---TTGTCCATCGGTACATTAGTAATGCTGGTTGGTGGTTATCTTGGCGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTGTTGGT---TTTATCATCGGTATGGCTGGTTGGGCATACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCCGGGTTGCATCAGAG------CAA---GCGTCTGAGTCAGTT---AAG---TCT---GCC---TTT---TCA---ACAATG---CGTTGGATTGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LSIGTLVMLVGGYLGE---A------G--Y-----------M----------------------NV------TVG-FIIGMAGWAYILYEI-----F--A-GEAGRVASE--Q-ASESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-b]_KJ927358 [III-Alpha1-b] PRGD_OTU008b_d31508d5f22b12b425f581e7093a2684 gb|KJ927358| PRGD_OTU008b_d31508d5f22b12b425f581e7093a2684, putative proteorhodopsin gene, partial cds. PRGD_OTU008b_d31508d5f22b12b425f581e7093a2684, putative proteorhodopsin gene, partial cds. KJ927358 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) TTGATCACAGTACCACTGCTGATGATTGAGTTCTACCTCATCCTACGGGCTATTACGAACGTATCCGGCGGCGTCTTCTGGCGTTTGTCCATCGGTACATTAGTAATGCTGGTTGGTGGTTATCTTGGCGAAGCCGGTTACATGAATGTCACTGTTGGTTTTATCATCGGTATGGCTGGTTGGGCATACATTCTGTATGAAATCTTTGCTGGTGAAGCTGGCCGGGTTGCATCGGAGCAAGCGTCTGAGTCAGTTAAGTCTGCCTTTTCAACAATGCGTTGGATTGTAACAATC LITVPLLMIEFYLILRAITNVSGGVFWRLSIGTLVMLVGGYLGEAGYMNVTVGFIIGMAGWAYILYEIFAGEAGRVASEQASESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTACCACTGCTGATGATTGAGTTCTACCTCATCCTACGGGCT---------ATT---ACGAACGTATCCGGC---GGCGTC------------------------------------TTCTGGCGT---TTGTCCATCGGTACATTAGTAATGCTGGTTGGTGGTTATCTTGGCGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTGTTGGT---TTTATCATCGGTATGGCTGGTTGGGCATACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCCGGGTTGCATCGGAG------CAA---GCGTCTGAGTCAGTT---AAG---TCT---GCC---TTT---TCA---ACAATG---CGTTGGATTGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LSIGTLVMLVGGYLGE---A------G--Y-----------M----------------------NV------TVG-FIIGMAGWAYILYEI-----F--A-GEAGRVASE--Q-ASESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-b]_KJ927352 [III-Alpha1-b] PRGD_OTU008b_9ff74030150c33333c429359595fa1bc gb|KJ927352| PRGD_OTU008b_9ff74030150c33333c429359595fa1bc, putative proteorhodopsin gene, partial cds. PRGD_OTU008b_9ff74030150c33333c429359595fa1bc, putative proteorhodopsin gene, partial cds. KJ927352 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) TTGATCACAGTGCCACTGCTGATGATTGAGTTCTACCTCATCCTACGGGCTATTACGAACGTATCTGGCGGCGTCTTCTGGCGTTTGTCCATCGGTACATTAGTTATGCTGGTTGGTGGTTATCTTGGCGAAGCCGGTTACATGAATGTCACTGTTGGTTTTATCATCGGCATGGCTGGTTGGGCATACATTCTTTATGAAATCTTTGCTGGTGAAGCTGGCCGGGTTGCATCGGAGCAAGCGTCTGAATCAGTTAAGTCTGCCTTTTCAACAATGCGTTGGATTGTAACAATC LITVPLLMIEFYLILRAITNVSGGVFWRLSIGTLVMLVGGYLGEAGYMNVTVGFIIGMAGWAYILYEIFAGEAGRVASEQASESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCACTGCTGATGATTGAGTTCTACCTCATCCTACGGGCT---------ATT---ACGAACGTATCTGGC---GGCGTC------------------------------------TTCTGGCGT---TTGTCCATCGGTACATTAGTTATGCTGGTTGGTGGTTATCTTGGCGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTGTTGGT---TTTATCATCGGCATGGCTGGTTGGGCATACATTCTTTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCCGGGTTGCATCGGAG------CAA---GCGTCTGAATCAGTT---AAG---TCT---GCC---TTT---TCA---ACAATG---CGTTGGATTGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LSIGTLVMLVGGYLGE---A------G--Y-----------M----------------------NV------TVG-FIIGMAGWAYILYEI-----F--A-GEAGRVASE--Q-ASESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-b]_KJ927347 [III-Alpha1-b] PRGD_OTU008b_86aaa0175f0d8f9d9b0aff850091c763 gb|KJ927347| PRGD_OTU008b_86aaa0175f0d8f9d9b0aff850091c763, putative proteorhodopsin gene, partial cds. PRGD_OTU008b_86aaa0175f0d8f9d9b0aff850091c763, putative proteorhodopsin gene, partial cds. KJ927347 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTGATCACAGTGCCACTGCTAATGATCGAGTTCTACCTCATCCTTCGGGCTATCACGAATGTATCTGGAGGCGTCTTCTGGCGCCTGTCCATCGGTACATTAGTAATGCTGGTTGGTGGTTATCTTGGCGAAGCCGGTTACATGAATGCCACCGTTGGTTTTATCATCGGTATGGCTGGTTGGGCATACATTCTGTATGAAATCTTTGCTGGTGAAGCTGGCCGGGTTGCATCGGAGCAAGCGTCTGACTCAGTTAAGTCTGCCTTTTCAACAATGCGTTGGATTGTAACAATT LITVPLLMIEFYLILRAITNVSGGVFWRLSIGTLVMLVGGYLGEAGYMNATVGFIIGMAGWAYILYEIFAGEAGRVASEQASDSVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCACTGCTAATGATCGAGTTCTACCTCATCCTTCGGGCT---------ATC---ACGAATGTATCTGGA---GGCGTC------------------------------------TTCTGGCGC---CTGTCCATCGGTACATTAGTAATGCTGGTTGGTGGTTATCTTGGCGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGCC------------------ACCGTTGGT---TTTATCATCGGTATGGCTGGTTGGGCATACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCCGGGTTGCATCGGAG------CAA---GCGTCTGACTCAGTT---AAG---TCT---GCC---TTT---TCA---ACAATG---CGTTGGATTGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LSIGTLVMLVGGYLGE---A------G--Y-----------M----------------------NA------TVG-FIIGMAGWAYILYEI-----F--A-GEAGRVASE--Q-ASDSV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-b]_KJ927348 [III-Alpha1-b] PRGD_OTU008b_8b1348fd393c15fcd71febcdc4b502f5 gb|KJ927348| PRGD_OTU008b_8b1348fd393c15fcd71febcdc4b502f5, putative proteorhodopsin gene, partial cds. PRGD_OTU008b_8b1348fd393c15fcd71febcdc4b502f5, putative proteorhodopsin gene, partial cds. KJ927348 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACAGTGCCACTGCTAATGATCGAGTTCTACCTCATCCTTCGGGCTATTACGAATGTATCTGGAGGCGTCTTCTGGCGCCTGTCCATCGGTTCATTAGTAATGCTGGTTGGTGGTTATCTTGGCGAAGCCGGTTACATGAATGCCACCGTTGGTTTTATCATCGGTATGGCTGGTTGGGCATACATTCTGTATGAAATCTTTGCTGGTGAAGCTGGCCGGGTTGCATCGGAGCAAGCGTCTGACTCAGTTAAGTCTGCCTTTTCAACAATGCGTTGGATTGTAACAATC LITVPLLMIEFYLILRAITNVSGGVFWRLSIGSLVMLVGGYLGEAGYMNATVGFIIGMAGWAYILYEIFAGEAGRVASEQASDSVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCACTGCTAATGATCGAGTTCTACCTCATCCTTCGGGCT---------ATT---ACGAATGTATCTGGA---GGCGTC------------------------------------TTCTGGCGC---CTGTCCATCGGTTCATTAGTAATGCTGGTTGGTGGTTATCTTGGCGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGCC------------------ACCGTTGGT---TTTATCATCGGTATGGCTGGTTGGGCATACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCCGGGTTGCATCGGAG------CAA---GCGTCTGACTCAGTT---AAG---TCT---GCC---TTT---TCA---ACAATG---CGTTGGATTGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LSIGSLVMLVGGYLGE---A------G--Y-----------M----------------------NA------TVG-FIIGMAGWAYILYEI-----F--A-GEAGRVASE--Q-ASDSV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-b]_KJ927346 [III-Alpha1-b] PRGD_OTU008b_86735256a216b1f26ea5a9aeea5ab98a gb|KJ927346| PRGD_OTU008b_86735256a216b1f26ea5a9aeea5ab98a, putative proteorhodopsin gene, partial cds. PRGD_OTU008b_86735256a216b1f26ea5a9aeea5ab98a, putative proteorhodopsin gene, partial cds. KJ927346 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACAGTGCCACTGCTGATGATCGAGTTCTACCTCATCCTTCGGGCTATTACGAACGTATCTGGCGGCGTCTTCTGGCGCCTGTCCATCGGTACATTAGTAATGCTGGTTGGTGGTTATCTTGGCGAAGCCGGTTACATGAATGTTACTGTTGGTTTTATCATTGGTATGGCTGGTTGGGCATACATTCTGTATGAAATCTTTGCTGGTGAAGCTGGCCGAGTTGCATCGGAGCAAGCGTCTGACTCAGTTAAGTCTGCCTTTTCAACAATGCGTTGGATTGTAACAATC LITVPLLMIEFYLILRAITNVSGGVFWRLSIGTLVMLVGGYLGEAGYMNVTVGFIIGMAGWAYILYEIFAGEAGRVASEQASDSVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCACTGCTGATGATCGAGTTCTACCTCATCCTTCGGGCT---------ATT---ACGAACGTATCTGGC---GGCGTC------------------------------------TTCTGGCGC---CTGTCCATCGGTACATTAGTAATGCTGGTTGGTGGTTATCTTGGCGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTT------------------ACTGTTGGT---TTTATCATTGGTATGGCTGGTTGGGCATACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCCGAGTTGCATCGGAG------CAA---GCGTCTGACTCAGTT---AAG---TCT---GCC---TTT---TCA---ACAATG---CGTTGGATTGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LSIGTLVMLVGGYLGE---A------G--Y-----------M----------------------NV------TVG-FIIGMAGWAYILYEI-----F--A-GEAGRVASE--Q-ASDSV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-b]_KJ927340 [III-Alpha1-b] PRGD_OTU008b_002cc4670a7235b94a880787e53274e3 gb|KJ927340| PRGD_OTU008b_002cc4670a7235b94a880787e53274e3, putative proteorhodopsin gene, partial cds. PRGD_OTU008b_002cc4670a7235b94a880787e53274e3, putative proteorhodopsin gene, partial cds. KJ927340 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTGATCACAGTGCCACTGCTGATGATTGAATTCTACCTTATCCTACGGGCTATTACGAACGTATCTGGCGGCGTCTTCTGGCGCCTGTCCATCGGTACATTAGTAATGCTGGTTGGTGGTTATCTTGGCGAAGCCGGTTACATGAATGTCACTGTTGGCTTTATCATCGGTATGGCTGGTTGGGCATACATTCTGTATGAAATCTTTGCTGGTGAAGCTGGCCGGGTTGCATCGGAGCAAGCGTCTGACTCAGTTAAGTCTGCCTTTTCAACAATGCGTTGGATTGTAACAATC LITVPLLMIEFYLILRAITNVSGGVFWRLSIGTLVMLVGGYLGEAGYMNVTVGFIIGMAGWAYILYEIFAGEAGRVASEQASDSVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCACTGCTGATGATTGAATTCTACCTTATCCTACGGGCT---------ATT---ACGAACGTATCTGGC---GGCGTC------------------------------------TTCTGGCGC---CTGTCCATCGGTACATTAGTAATGCTGGTTGGTGGTTATCTTGGCGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTGTTGGC---TTTATCATCGGTATGGCTGGTTGGGCATACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCCGGGTTGCATCGGAG------CAA---GCGTCTGACTCAGTT---AAG---TCT---GCC---TTT---TCA---ACAATG---CGTTGGATTGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LSIGTLVMLVGGYLGE---A------G--Y-----------M----------------------NV------TVG-FIIGMAGWAYILYEI-----F--A-GEAGRVASE--Q-ASDSV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-b]_KJ927350 [III-Alpha1-b] PRGD_OTU008b_931af6b6151e2933f55caa0d31d9dcec gb|KJ927350| PRGD_OTU008b_931af6b6151e2933f55caa0d31d9dcec, putative proteorhodopsin gene, partial cds. PRGD_OTU008b_931af6b6151e2933f55caa0d31d9dcec, putative proteorhodopsin gene, partial cds. KJ927350 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTGATCACAGTGCCACTGCTGATGATAGAGTTCTACCTCATCCTGCGGGCTATTACGAACGTATCTGGCGGCGTCTTCTGGCGCCTGTCCATCGGTACATTAGTAATGCTGGTTGGTGGTTATCTTGGCGAAGCCGGTTACATGAATGTCACTGTTGGTTTTATCATCGGTATGGCTGGTTGGGCATACATTCTGTATGAAATCTTTGCTGGTGAAGCTGGCCGGGTTGCATCAGAACAAGCGTCTGAATCAGTTAAGTCTGCCTTTTCAACAATGCGTTGGATTGTAACAATC LITVPLLMIEFYLILRAITNVSGGVFWRLSIGTLVMLVGGYLGEAGYMNVTVGFIIGMAGWAYILYEIFAGEAGRVASEQASESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCACTGCTGATGATAGAGTTCTACCTCATCCTGCGGGCT---------ATT---ACGAACGTATCTGGC---GGCGTC------------------------------------TTCTGGCGC---CTGTCCATCGGTACATTAGTAATGCTGGTTGGTGGTTATCTTGGCGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTGTTGGT---TTTATCATCGGTATGGCTGGTTGGGCATACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCCGGGTTGCATCAGAA------CAA---GCGTCTGAATCAGTT---AAG---TCT---GCC---TTT---TCA---ACAATG---CGTTGGATTGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LSIGTLVMLVGGYLGE---A------G--Y-----------M----------------------NV------TVG-FIIGMAGWAYILYEI-----F--A-GEAGRVASE--Q-ASESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-b]_KJ927351 [III-Alpha1-b] PRGD_OTU008b_9626d43b1dd5c7978996f64e58b0d0c0 gb|KJ927351| PRGD_OTU008b_9626d43b1dd5c7978996f64e58b0d0c0, putative proteorhodopsin gene, partial cds. PRGD_OTU008b_9626d43b1dd5c7978996f64e58b0d0c0, putative proteorhodopsin gene, partial cds. KJ927351 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) TTGATCACAGTGCCACTGCTGATGATTGAGTTCTACCTCATCCTACGGGCAATTACGAACGTATCTGGCGGCATCTTCTGGCGCCTGTCTATCGGTACATTAGTAATGCTGGTTGGGGGTTACCTCGGCGAAGCCGGTTACATGAATGTAACTGTTGGTTTCATTATCGGTATGGCTGGTTGGGCATACATTCTGTATGAAATCTTTGCTGGTGAAGCTGGCCGGGTCGCATCAGAGCAAGCGTCTGACGCAGTTAAGTCTGCCTATTCAACAATGCGTTGGATTGTAACAATC LITVPLLMIEFYLILRAITNVSGGIFWRLSIGTLVMLVGGYLGEAGYMNVTVGFIIGMAGWAYILYEIFAGEAGRVASEQASDAVKSAYSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCACTGCTGATGATTGAGTTCTACCTCATCCTACGGGCA---------ATT---ACGAACGTATCTGGC---GGCATC------------------------------------TTCTGGCGC---CTGTCTATCGGTACATTAGTAATGCTGGTTGGGGGTTACCTCGGCGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTGTTGGT---TTCATTATCGGTATGGCTGGTTGGGCATACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCCGGGTCGCATCAGAG------CAA---GCGTCTGACGCAGTT---AAG---TCT---GCC---TAT---TCA---ACAATG---CGTTGGATTGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GI------------FWR-LSIGTLVMLVGGYLGE---A------G--Y-----------M----------------------NV------TVG-FIIGMAGWAYILYEI-----F--A-GEAGRVASE--Q-ASDAV-K-S-A-Y-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-b]_KJ927355 [III-Alpha1-b] PRGD_OTU008b_be6f88f17e3a1e0c13dcf7b07c739600 gb|KJ927355| PRGD_OTU008b_be6f88f17e3a1e0c13dcf7b07c739600, putative proteorhodopsin gene, partial cds. PRGD_OTU008b_be6f88f17e3a1e0c13dcf7b07c739600, putative proteorhodopsin gene, partial cds. KJ927355 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCATCACAGTGCCACTGCTGATGATTGAATTCTACCTTATCCTACGGGCAATTACGAACGTATCTGGCGGCGTCTTCTGGCGCCTGTCTATCGGTACATTAGTCATGCTGGTTGGTGGTTATCTTGGCGAAGCCGGTTACATGAATGTAACTGTCGGTTTTGTTATCGGTATGGCTGGTTGGGCATACATTCTGTATGAAATCTTTGCTGGTGAAGCCGGCCGGGTTGCATCAGAGCAAGCGTCTGACTCAGTTAAGTCTGCCTTTTCAACAATGCGTTGGATTGTAACAATC LITVPLLMIEFYLILRAITNVSGGVFWRLSIGTLVMLVGGYLGEAGYMNVTVGFVIGMAGWAYILYEIFAGEAGRVASEQASDSVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTGCCACTGCTGATGATTGAATTCTACCTTATCCTACGGGCA---------ATT---ACGAACGTATCTGGC---GGCGTC------------------------------------TTCTGGCGC---CTGTCTATCGGTACATTAGTCATGCTGGTTGGTGGTTATCTTGGCGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTGTCGGT---TTTGTTATCGGTATGGCTGGTTGGGCATACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCCGGCCGGGTTGCATCAGAG------CAA---GCGTCTGACTCAGTT---AAG---TCT---GCC---TTT---TCA---ACAATG---CGTTGGATTGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LSIGTLVMLVGGYLGE---A------G--Y-----------M----------------------NV------TVG-FVIGMAGWAYILYEI-----F--A-GEAGRVASE--Q-ASDSV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-b]_KJ927357 [III-Alpha1-b] PRGD_OTU008b_d22fcee18963683b8a55c78d2d6d7161 gb|KJ927357| PRGD_OTU008b_d22fcee18963683b8a55c78d2d6d7161, putative proteorhodopsin gene, partial cds. PRGD_OTU008b_d22fcee18963683b8a55c78d2d6d7161, putative proteorhodopsin gene, partial cds. KJ927357 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45; -33.28, 45.35) CTGATCACAGTACCACTACTGATGATCGAGTTCTACCTTATCCTACGGGCAATTACAGCTGTATCAGGCGGCATCTTCTGGCGCCTGTCTATCGGTACATTAGTAATGCTGGTTGGTGGTTACCTTGGCGAAGCCGGTTACATGAATGTAACTGTTGGTTTTGTTATCGGTATGGCTGGTTGGGCGTACATTCTGTATGAAATCTTTGCTGGTGAAGCTGGCCGGGTTGCATCAGAGCAAGCGTCTGAATCAGTTAAGTCTGCCTTTTCAACAATGCGTTGGATTGTAACAATC LITVPLLMIEFYLILRAITAVSGGIFWRLSIGTLVMLVGGYLGEAGYMNVTVGFVIGMAGWAYILYEIFAGEAGRVASEQASESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTACCACTACTGATGATCGAGTTCTACCTTATCCTACGGGCA---------ATT---ACAGCTGTATCAGGC---GGCATC------------------------------------TTCTGGCGC---CTGTCTATCGGTACATTAGTAATGCTGGTTGGTGGTTACCTTGGCGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTGTTGGT---TTTGTTATCGGTATGGCTGGTTGGGCGTACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCCGGGTTGCATCAGAG------CAA---GCGTCTGAATCAGTT---AAG---TCT---GCC---TTT---TCA---ACAATG---CGTTGGATTGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LSIGTLVMLVGGYLGE---A------G--Y-----------M----------------------NV------TVG-FVIGMAGWAYILYEI-----F--A-GEAGRVASE--Q-ASESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-b]_KJ927354 [III-Alpha1-b] PRGD_OTU008b_b3a2156d9a29297ae715ecd231d1be57 gb|KJ927354| PRGD_OTU008b_b3a2156d9a29297ae715ecd231d1be57, putative proteorhodopsin gene, partial cds. PRGD_OTU008b_b3a2156d9a29297ae715ecd231d1be57, putative proteorhodopsin gene, partial cds. KJ927354 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683), Indian Ocean (-33.28, 45.35) CTGATCACAGTGCCACTACTGATGATCGAGTTCTACCTTATCCTACGGGCAATTACAGCTGTATCAGGCGGCATCTTCTGGCGCCTGTCTATCGGTACATTAGTAATGCTTGTTGGTGGTTACCTTGGCGAAGCCGGTTACATGAATGTAACAGTTGGTTTTGTTATCGGTATGGCTGGTTGGGCATACATTCTGTATGAAATTTTTGCTGGTGAAGCTGGCCGGGTTGCATCAGAGCAAGCGTCTGAATCAGTTAAGTCTGCCTTTTCAACAATGCGTTGGATTGTAACAATC LITVPLLMIEFYLILRAITAVSGGIFWRLSIGTLVMLVGGYLGEAGYMNVTVGFVIGMAGWAYILYEIFAGEAGRVASEQASESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTGCCACTACTGATGATCGAGTTCTACCTTATCCTACGGGCA---------ATT---ACAGCTGTATCAGGC---GGCATC------------------------------------TTCTGGCGC---CTGTCTATCGGTACATTAGTAATGCTTGTTGGTGGTTACCTTGGCGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTTATCGGTATGGCTGGTTGGGCATACATTCTGTATGAAATT---------------TTT------GCT---GGTGAAGCTGGCCGGGTTGCATCAGAG------CAA---GCGTCTGAATCAGTT---AAG---TCT---GCC---TTT---TCA---ACAATG---CGTTGGATTGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LSIGTLVMLVGGYLGE---A------G--Y-----------M----------------------NV------TVG-FVIGMAGWAYILYEI-----F--A-GEAGRVASE--Q-ASESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-b]_KJ927345 [III-Alpha1-b] PRGD_OTU008b_68ce2208fc291f1a45c214aa7c54dd56 gb|KJ927345| PRGD_OTU008b_68ce2208fc291f1a45c214aa7c54dd56, putative proteorhodopsin gene, partial cds. PRGD_OTU008b_68ce2208fc291f1a45c214aa7c54dd56, putative proteorhodopsin gene, partial cds. KJ927345 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATCACAGTGCCTCTACTGATGATCGAATTCTACCTTATCCTACGGGCAATTACGGCTGTATCAGGCGGCATCTTCTGGCGTCTGTCTATCGGTACATTAGTAATGCTGGTTGGTGGTTACCTTGGCGAAGCCGGTTACATGAATGTAACTGTTGGTTTTGTTATCGGTATGGCTGGTTGGGCATACATTCTGTATGAAATCTTTGCTGGTGAAGCTGGCCGGGTTGCATCAGAGCAAGCATCTGAATCAGTTAAGTCTGCCTTTTCAACAATGCGTTGGATTGTAACAATC LITVPLLMIEFYLILRAITAVSGGIFWRLSIGTLVMLVGGYLGEAGYMNVTVGFVIGMAGWAYILYEIFAGEAGRVASEQASESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTGCCTCTACTGATGATCGAATTCTACCTTATCCTACGGGCA---------ATT---ACGGCTGTATCAGGC---GGCATC------------------------------------TTCTGGCGT---CTGTCTATCGGTACATTAGTAATGCTGGTTGGTGGTTACCTTGGCGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTGTTGGT---TTTGTTATCGGTATGGCTGGTTGGGCATACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCCGGGTTGCATCAGAG------CAA---GCATCTGAATCAGTT---AAG---TCT---GCC---TTT---TCA---ACAATG---CGTTGGATTGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LSIGTLVMLVGGYLGE---A------G--Y-----------M----------------------NV------TVG-FVIGMAGWAYILYEI-----F--A-GEAGRVASE--Q-ASESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-b]_KJ927353 [III-Alpha1-b] PRGD_OTU008b_a8d01286ab20abd47b4396f1d814df3b gb|KJ927353| PRGD_OTU008b_a8d01286ab20abd47b4396f1d814df3b, putative proteorhodopsin gene, partial cds. PRGD_OTU008b_a8d01286ab20abd47b4396f1d814df3b, putative proteorhodopsin gene, partial cds. KJ927353 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) CTGATCACAGTGCCACTACTGATGATCGAATTCTACCTTATCCTACGGGCAATTACGGCTGTATCAGGCGGCATCTTCTGGCGTCTATCTATCGGTTCGTTAGTAATGCTGGTTGGTGGTTACCTTGGCGAAGCCGGTTACATGAATGTAACTGTTGCTTTTGTTATCGGTATGGCTGGTTGGGCATACATTCTGTATGAAATCTTTGCTGGTGAAGCTGGCCGGGTTGCATCAGAGCAAGCGTCTGACGCAGTTAAGTCTGCCTTTTCAACAATGCGTTGGATTGTAACAATC LITVPLLMIEFYLILRAITAVSGGIFWRLSIGSLVMLVGGYLGEAGYMNVTVAFVIGMAGWAYILYEIFAGEAGRVASEQASDAVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTGCCACTACTGATGATCGAATTCTACCTTATCCTACGGGCA---------ATT---ACGGCTGTATCAGGC---GGCATC------------------------------------TTCTGGCGT---CTATCTATCGGTTCGTTAGTAATGCTGGTTGGTGGTTACCTTGGCGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTGTTGCT---TTTGTTATCGGTATGGCTGGTTGGGCATACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCCGGGTTGCATCAGAG------CAA---GCGTCTGACGCAGTT---AAG---TCT---GCC---TTT---TCA---ACAATG---CGTTGGATTGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LSIGSLVMLVGGYLGE---A------G--Y-----------M----------------------NV------TVA-FVIGMAGWAYILYEI-----F--A-GEAGRVASE--Q-ASDAV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-b]_KJ927359 [III-Alpha1-b] PRGD_OTU008b_e6e36ad96c982aa674bf388e39c023b5 gb|KJ927359| PRGD_OTU008b_e6e36ad96c982aa674bf388e39c023b5, putative proteorhodopsin gene, partial cds. PRGD_OTU008b_e6e36ad96c982aa674bf388e39c023b5, putative proteorhodopsin gene, partial cds. KJ927359 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683) CTGATCACAGTACCATTACTGATGATCGAATTCTACCTTATCCTACGGGCAATTACTGCTGTATCAGGCGGCATTTTCTGGCGTCTATCTATCGGTTCATTAGTAATGCTGGTTGGTGGTTACCTCGGCGAAGCCGGTTACATGAATGTAACTGTTGCTTTTGTTGTCGGTATGGCTGGTTGGGCATACATTCTGTATGAAATCTTTGCTGGTGAAGCCGGCCGGGTTGCATCAGAGCAAGCGTCTGACGCAGTTAAGTCTGCCTTTTCAACAATGCGTTGGATTGTAACAATC LITVPLLMIEFYLILRAITAVSGGIFWRLSIGSLVMLVGGYLGEAGYMNVTVAFVVGMAGWAYILYEIFAGEAGRVASEQASDAVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTACCATTACTGATGATCGAATTCTACCTTATCCTACGGGCA---------ATT---ACTGCTGTATCAGGC---GGCATT------------------------------------TTCTGGCGT---CTATCTATCGGTTCATTAGTAATGCTGGTTGGTGGTTACCTCGGCGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTGTTGCT---TTTGTTGTCGGTATGGCTGGTTGGGCATACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCCGGCCGGGTTGCATCAGAG------CAA---GCGTCTGACGCAGTT---AAG---TCT---GCC---TTT---TCA---ACAATG---CGTTGGATTGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LSIGSLVMLVGGYLGE---A------G--Y-----------M----------------------NV------TVA-FVVGMAGWAYILYEI-----F--A-GEAGRVASE--Q-ASDAV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-b]_KJ927342 [III-Alpha1-b] PRGD_OTU008b_35bd9f3cbff5afdd0d70c388dacac036 gb|KJ927342| PRGD_OTU008b_35bd9f3cbff5afdd0d70c388dacac036, putative proteorhodopsin gene, partial cds. PRGD_OTU008b_35bd9f3cbff5afdd0d70c388dacac036, putative proteorhodopsin gene, partial cds. KJ927342 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683) CTGATCACAGTGCCACTACTGATGATCGAATTCTACCTTATCCTACGGGCAATTACGGCTGTATCAGGCGGCATCTTCTGGCGCCTATCTATTGGTACATTAGTGATGCTGGTTGGTGGTTACCTTGGCGAAGCCGGTTACATGAATGTAACAGTTGGTTTTGTTATCGGTATGGCTGGTTGGGCATACATTTTGTATGAAATCTTTGCTGGTGAAGCTGGCCGGGTTGCAGCAGAGCAAGCGTCTGACTCGGTTAAGTCTGCCTTTTCAACAATGCGTTGGATTGTAACAATC LITVPLLMIEFYLILRAITAVSGGIFWRLSIGTLVMLVGGYLGEAGYMNVTVGFVIGMAGWAYILYEIFAGEAGRVAAEQASDSVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTGCCACTACTGATGATCGAATTCTACCTTATCCTACGGGCA---------ATT---ACGGCTGTATCAGGC---GGCATC------------------------------------TTCTGGCGC---CTATCTATTGGTACATTAGTGATGCTGGTTGGTGGTTACCTTGGCGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTTATCGGTATGGCTGGTTGGGCATACATTTTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCCGGGTTGCAGCAGAG------CAA---GCGTCTGACTCGGTT---AAG---TCT---GCC---TTT---TCA---ACAATG---CGTTGGATTGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GI------------FWR-LSIGTLVMLVGGYLGE---A------G--Y-----------M----------------------NV------TVG-FVIGMAGWAYILYEI-----F--A-GEAGRVAAE--Q-ASDSV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-b]_KJ927349 [III-Alpha1-b] PRGD_OTU008b_8e294757b6311af4ef0a74f19b8ccfcd gb|KJ927349| PRGD_OTU008b_8e294757b6311af4ef0a74f19b8ccfcd, putative proteorhodopsin gene, partial cds. PRGD_OTU008b_8e294757b6311af4ef0a74f19b8ccfcd, putative proteorhodopsin gene, partial cds. KJ927349 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683) CTCATCACAGTGCCACTACTGATGATCGAATTCTACCTTATCCTACGGGCAATCACGAACGTATCCGGCGGCATCTTCTGGCGCCTGTCTATCGGTACATTAGTCATGCTGGTTGGTGGTTACCTTGGCGAAGCCGGTTACATGAATGTAACTGTTGGTTTTGTTATAGGTATGGCTGGTTGGGCATACATTCTGTATGAAATCTTTGCTGGTGAAGCCGGCCGGGTTGCATCAGAGCAAGCGTCTGACTCAGTTAAGTCTGCGTTTTCAACAATGCGTTGGATTGTAACAATC LITVPLLMIEFYLILRAITNVSGGIFWRLSIGTLVMLVGGYLGEAGYMNVTVGFVIGMAGWAYILYEIFAGEAGRVASEQASDSVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTGCCACTACTGATGATCGAATTCTACCTTATCCTACGGGCA---------ATC---ACGAACGTATCCGGC---GGCATC------------------------------------TTCTGGCGC---CTGTCTATCGGTACATTAGTCATGCTGGTTGGTGGTTACCTTGGCGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTGTTGGT---TTTGTTATAGGTATGGCTGGTTGGGCATACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCCGGCCGGGTTGCATCAGAG------CAA---GCGTCTGACTCAGTT---AAG---TCT---GCG---TTT---TCA---ACAATG---CGTTGGATTGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GI------------FWR-LSIGTLVMLVGGYLGE---A------G--Y-----------M----------------------NV------TVG-FVIGMAGWAYILYEI-----F--A-GEAGRVASE--Q-ASDSV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-b]_KJ927339 [III-Alpha1-b] PRGD_OTU008b_otuREP_1f44efe613c300769a7b78ef53f58256 gb|KJ927339| PRGD_OTU008b_otuREP_1f44efe613c300769a7b78ef53f58256, putative proteorhodopsin gene, partial cds. PRGD_OTU008b_otuREP_1f44efe613c300769a7b78ef53f58256, putative proteorhodopsin gene, partial cds. KJ927339 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTCATCACAGTGCCACTACTGATGATCGAATTCTACCTTATCCTACGGGCAATTACGAACGTATCTGGCGGCATCTTCTGGCGCCTGTCTATCGGTACATTAGTCATGCTGGTTGGTGGTTACCTTGGCGAAGCCGGTTACATGAATGTAACTGTTGGTTTTGTTATCGGTATGGCTGGTTGGGCATACATTCTGTATGAAATCTTTGCTGGTGAAGCCGGCCGGGTTGCATCAGAGCAAGCGTCTGACTCAGTTAAGTCTGCGTTTTCAACAATGCGTTGGATTGTAACAATC LITVPLLMIEFYLILRAITNVSGGIFWRLSIGTLVMLVGGYLGEAGYMNVTVGFVIGMAGWAYILYEIFAGEAGRVASEQASDSVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTGCCACTACTGATGATCGAATTCTACCTTATCCTACGGGCA---------ATT---ACGAACGTATCTGGC---GGCATC------------------------------------TTCTGGCGC---CTGTCTATCGGTACATTAGTCATGCTGGTTGGTGGTTACCTTGGCGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTGTTGGT---TTTGTTATCGGTATGGCTGGTTGGGCATACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCCGGCCGGGTTGCATCAGAG------CAA---GCGTCTGACTCAGTT---AAG---TCT---GCG---TTT---TCA---ACAATG---CGTTGGATTGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GI------------FWR-LSIGTLVMLVGGYLGE---A------G--Y-----------M----------------------NV------TVG-FVIGMAGWAYILYEI-----F--A-GEAGRVASE--Q-ASDSV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-b]_KJ927343 [III-Alpha1-b] PRGD_OTU008b_38d24f8e5eeccb959d076f09a859e747 gb|KJ927343| PRGD_OTU008b_38d24f8e5eeccb959d076f09a859e747, putative proteorhodopsin gene, partial cds. PRGD_OTU008b_38d24f8e5eeccb959d076f09a859e747, putative proteorhodopsin gene, partial cds. KJ927343 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/B subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 01-juil-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683) CTCATCACAGTGCCACTACTGATGATCGAATTCTACCTTATCCTACGGGCAATTACGAACGTATCTGGCGGCATCTTCTGGCGCCTGTCTATTGGTACATTAGTCATGCTGGTTGGTGGTTACCTCGGCGAAGCCGGTTACATGAATGTAACTGTCGGTTTTGTTATCGGTATGGCTGGTTGGGCATACATTCTGTATGAAATCTTTGCTGGCGAAGCCGGCCGGGTTGCATCAGAGCAAGCGTCTGACTCAGTTAAGTCTGCCTTTTCAACAATGCGTTGGATTGTAACAATC LITVPLLMIEFYLILRAITNVSGGIFWRLSIGTLVMLVGGYLGEAGYMNVTVGFVIGMAGWAYILYEIFAGEAGRVASEQASDSVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTGCCACTACTGATGATCGAATTCTACCTTATCCTACGGGCA---------ATT---ACGAACGTATCTGGC---GGCATC------------------------------------TTCTGGCGC---CTGTCTATTGGTACATTAGTCATGCTGGTTGGTGGTTACCTCGGCGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTGTCGGT---TTTGTTATCGGTATGGCTGGTTGGGCATACATTCTGTATGAAATC---------------TTT------GCT---GGCGAAGCCGGCCGGGTTGCATCAGAG------CAA---GCGTCTGACTCAGTT---AAG---TCT---GCC---TTT---TCA---ACAATG---CGTTGGATTGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GI------------FWR-LSIGTLVMLVGGYLGE---A------G--Y-----------M----------------------NV------TVG-FVIGMAGWAYILYEI-----F--A-GEAGRVASE--Q-ASDSV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1]_KJ927360 [III-Alpha1] PRGD_OTU008c_otuREP_94641abb6003817b5d4a04d4b43166c6 gb|KJ927360| PRGD_OTU008c_otuREP_94641abb6003817b5d4a04d4b43166c6, putative proteorhodopsin gene, partial cds. PRGD_OTU008c_otuREP_94641abb6003817b5d4a04d4b43166c6, putative proteorhodopsin gene, partial cds. KJ927360 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTCATCACTGTGCCACTACTAATGATCGAATTCTACTTGATTCTACGTGCTATCACAGCCGTATCAGGTGGTGTTTTCTGGCGCCTAACAATCGGTACAATGGTCATGTTGGTCGGTGGTTACCTAGGTGAAGCAGGTTACATGAACGTAACTGTTGGTTTCATCATTGGTATGGCTGGTTGGGCATATATTTTGTATGAAATCTTTGCTGGTGAAGCTGGCAAGGTTGCTGCAAATGATGCGCCTGCATCAGTTAAATCTGCTTACTCAACAATGCGTTGGATTGTAACAATC LITVPLLMIEFYLILRAITAVSGGVFWRLTIGTMVMLVGGYLGEAGYMNVTVGFIIGMAGWAYILYEIFAGEAGKVAANDAPASVKSAYSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACTGTGCCACTACTAATGATCGAATTCTACTTGATTCTACGTGCT---------ATC---ACAGCCGTATCAGGT---GGTGTT------------------------------------TTCTGGCGC---CTAACAATCGGTACAATGGTCATGTTGGTCGGTGGTTACCTAGGTGAA---------GCA------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACGTA------------------ACTGTTGGT---TTCATCATTGGTATGGCTGGTTGGGCATATATTTTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTTGCTGCAAAT------GAT---GCGCCTGCATCAGTT---AAA---TCT---GCT---TAC---TCA---ACAATG---CGTTGGATTGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GV------------FWR-LTIGTMVMLVGGYLGE---A------G--Y-----------M----------------------NV------TVG-FIIGMAGWAYILYEI-----F--A-GEAGKVAAN--D-APASV-K-S-A-Y-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1]_KJ927361 [III-Alpha1] PRGD_OTU008c_b5b29c6daeac0d453e838176cb842b1d gb|KJ927361| PRGD_OTU008c_b5b29c6daeac0d453e838176cb842b1d, putative proteorhodopsin gene, partial cds. PRGD_OTU008c_b5b29c6daeac0d453e838176cb842b1d, putative proteorhodopsin gene, partial cds. KJ927361 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCATCACTGTGCCACTACTAATGATCGAATTCTACTTGATTCTACGTGCTATCACAGCCGTATCAGGTGGTGTTTTCTGGCGCCTAACAATCGGTACAATGGTCATGTTGGTCGGTGGTTACCTAGGTGAAGCAGGTTACATGAACGTAACTGTTGGTTTCATCATTGGTATGGCAGGCTGGGCATACATTTTGTATGAAATCTTTGCTGGTGAAGCTGGCAAGGTTGCTGCAAATGATGCGCCTGCATCAGTTAAATCTGCTTACTCAACAATGCGTTGGATTGTAACAATC LITVPLLMIEFYLILRAITAVSGGVFWRLTIGTMVMLVGGYLGEAGYMNVTVGFIIGMAGWAYILYEIFAGEAGKVAANDAPASVKSAYSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACTGTGCCACTACTAATGATCGAATTCTACTTGATTCTACGTGCT---------ATC---ACAGCCGTATCAGGT---GGTGTT------------------------------------TTCTGGCGC---CTAACAATCGGTACAATGGTCATGTTGGTCGGTGGTTACCTAGGTGAA---------GCA------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACGTA------------------ACTGTTGGT---TTCATCATTGGTATGGCAGGCTGGGCATACATTTTGTATGAAATC---------------TTT------GCT---GGTGAAGCTGGCAAGGTTGCTGCAAAT------GAT---GCGCCTGCATCAGTT---AAA---TCT---GCT---TAC---TCA---ACAATG---CGTTGGATTGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TAVSG-GV------------FWR-LTIGTMVMLVGGYLGE---A------G--Y-----------M----------------------NV------TVG-FIIGMAGWAYILYEI-----F--A-GEAGKVAAN--D-APASV-K-S-A-Y-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-a]_KJ927372 [III-Alpha1-a] PRGD_OTU008d_c0f61e6dfda0dd2dd50462116ae90f09 gb|KJ927372| PRGD_OTU008d_c0f61e6dfda0dd2dd50462116ae90f09, putative proteorhodopsin gene, partial cds. PRGD_OTU008d_c0f61e6dfda0dd2dd50462116ae90f09, putative proteorhodopsin gene, partial cds. KJ927372 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATCACAGTTCCACTATTGATGATCGAGTTCTACTTAATCCTACGAGCTATTACAAATGTATCTGGCGGCGTTTTCTGGCGTCTTACAGTTGGTACATTGATTATGCTTATCGGTGGTTACCTAGGTGAAGCTGGTTACATGAACGTAACAGTTGCTTTCATCATTGGAATGGCTGGTTGGGCATACATCTTGTATGAAATCTTCGCGGGTGAAGCTGGACGTGTTGCAGCAGACGAAGCACCAGAGTCAGTTAAATCAGCTTACTCAACAATGCGTTGGATTGTAACAATC LITVPLLMIEFYLILRAITNVSGGVFWRLTVGTLIMLIGGYLGEAGYMNVTVAFIIGMAGWAYILYEIFAGEAGRVAADEAPESVKSAYSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTTCCACTATTGATGATCGAGTTCTACTTAATCCTACGAGCT---------ATT---ACAAATGTATCTGGC---GGCGTT------------------------------------TTCTGGCGT---CTTACAGTTGGTACATTGATTATGCTTATCGGTGGTTACCTAGGTGAA---------GCT------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACGTA------------------ACAGTTGCT---TTCATCATTGGAATGGCTGGTTGGGCATACATCTTGTATGAAATC---------------TTC------GCG---GGTGAAGCTGGACGTGTTGCAGCAGAC------GAA---GCACCAGAGTCAGTT---AAA---TCA---GCT---TAC---TCA---ACAATG---CGTTGGATTGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LTVGTLIMLIGGYLGE---A------G--Y-----------M----------------------NV------TVA-FIIGMAGWAYILYEI-----F--A-GEAGRVAAD--E-APESV-K-S-A-Y-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-a]_KJ927362 [III-Alpha1-a] PRGD_OTU008d_otuREP_f5e8cd3d89436d60bdbac845a5f3e611 gb|KJ927362| PRGD_OTU008d_otuREP_f5e8cd3d89436d60bdbac845a5f3e611, putative proteorhodopsin gene, partial cds. PRGD_OTU008d_otuREP_f5e8cd3d89436d60bdbac845a5f3e611, putative proteorhodopsin gene, partial cds. KJ927362 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937), Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) TTAATCACAGTTCCACTATTGATGATCGAGTTCTACTTAATCCTACGAGCTATTACAAATGTATCTGGCGGCGTTTTCTGGCGTCTTACAGTTGGTACATTGATTATGCTTATCGGTGGTTACCTAGGTGAAGCTGGTTACATGAATGTAACAGTTGCTTTCATCATTGGAATGGCTGGTTGGGCATACATCTTGTATGAAATCTTCGCAGGTGAAGCTGGACGTGTTGCAGCAGACGAAGCACCAGAGTCAGTTAAATCAGCTTACTCAACAATGCGTTGGATTGTAACAATC LITVPLLMIEFYLILRAITNVSGGVFWRLTVGTLIMLIGGYLGEAGYMNVTVAFIIGMAGWAYILYEIFAGEAGRVAADEAPESVKSAYSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTTCCACTATTGATGATCGAGTTCTACTTAATCCTACGAGCT---------ATT---ACAAATGTATCTGGC---GGCGTT------------------------------------TTCTGGCGT---CTTACAGTTGGTACATTGATTATGCTTATCGGTGGTTACCTAGGTGAA---------GCT------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGCT---TTCATCATTGGAATGGCTGGTTGGGCATACATCTTGTATGAAATC---------------TTC------GCA---GGTGAAGCTGGACGTGTTGCAGCAGAC------GAA---GCACCAGAGTCAGTT---AAA---TCA---GCT---TAC---TCA---ACAATG---CGTTGGATTGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LTVGTLIMLIGGYLGE---A------G--Y-----------M----------------------NV------TVA-FIIGMAGWAYILYEI-----F--A-GEAGRVAAD--E-APESV-K-S-A-Y-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-a]_KJ927363 [III-Alpha1-a] PRGD_OTU008d_3be95e79b6ce15671e1210d1a61cf511 gb|KJ927363| PRGD_OTU008d_3be95e79b6ce15671e1210d1a61cf511, putative proteorhodopsin gene, partial cds. PRGD_OTU008d_3be95e79b6ce15671e1210d1a61cf511, putative proteorhodopsin gene, partial cds. KJ927363 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACAGTTCCACTATTGATGATCGAGTTCTACTTAATCCTACGAGCTATTACAAATGTATCTGGCGGCGTTTTCTGGCGTCTTACAGTTGGTACATTAATTATGCTTATCGGTGGTTACCTAGGTGAAGCTGGTTACATGAATGTAACAGTTGCTTTCATCATTGGAATGGCTGGTTGGGCATACATCTTGTATGAAATCTTCGCAGGTGAAGCTGGACGTGTTGCAGCAGACGAAGCACCAGAGTCAGTTAAAGCAGCTTACTCAACAATGCGTTGGATTGTAACAATC LITVPLLMIEFYLILRAITNVSGGVFWRLTVGTLIMLIGGYLGEAGYMNVTVAFIIGMAGWAYILYEIFAGEAGRVAADEAPESVKAAYSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTTCCACTATTGATGATCGAGTTCTACTTAATCCTACGAGCT---------ATT---ACAAATGTATCTGGC---GGCGTT------------------------------------TTCTGGCGT---CTTACAGTTGGTACATTAATTATGCTTATCGGTGGTTACCTAGGTGAA---------GCT------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGCT---TTCATCATTGGAATGGCTGGTTGGGCATACATCTTGTATGAAATC---------------TTC------GCA---GGTGAAGCTGGACGTGTTGCAGCAGAC------GAA---GCACCAGAGTCAGTT---AAA---GCA---GCT---TAC---TCA---ACAATG---CGTTGGATTGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LTVGTLIMLIGGYLGE---A------G--Y-----------M----------------------NV------TVA-FIIGMAGWAYILYEI-----F--A-GEAGRVAAD--E-APESV-K-A-A-Y-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-a]_KJ927365 [III-Alpha1-a] PRGD_OTU008d_53d797d0dc15f87aa5edf507822ac0aa gb|KJ927365| PRGD_OTU008d_53d797d0dc15f87aa5edf507822ac0aa, putative proteorhodopsin gene, partial cds. PRGD_OTU008d_53d797d0dc15f87aa5edf507822ac0aa, putative proteorhodopsin gene, partial cds. KJ927365 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATCACAGTTCCACTATTGATGATCGAGTTCTATTTAATCCTACGAGCTATTACAAATGTATCTGGCGGCGTTTTCTGGCGTCTTACAGTTGGTACATTGATTATGCTTATCGGTGGTTACCTAGGTGAAGCTGGTTACATGAATGTAACAGTTGCTTTCATCATCGGAATGGCAGGTTGGGCATACATCTTGTATGAAATCTTCGCAGGTGAAGCTGGACGTGTTGCATCAGACGAAGCACCAGAGTCAGTTAAAGCAGCTTACTCAACAATGCGTTGGATTGTAACAATC LITVPLLMIEFYLILRAITNVSGGVFWRLTVGTLIMLIGGYLGEAGYMNVTVAFIIGMAGWAYILYEIFAGEAGRVASDEAPESVKAAYSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTTCCACTATTGATGATCGAGTTCTATTTAATCCTACGAGCT---------ATT---ACAAATGTATCTGGC---GGCGTT------------------------------------TTCTGGCGT---CTTACAGTTGGTACATTGATTATGCTTATCGGTGGTTACCTAGGTGAA---------GCT------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGCT---TTCATCATCGGAATGGCAGGTTGGGCATACATCTTGTATGAAATC---------------TTC------GCA---GGTGAAGCTGGACGTGTTGCATCAGAC------GAA---GCACCAGAGTCAGTT---AAA---GCA---GCT---TAC---TCA---ACAATG---CGTTGGATTGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LTVGTLIMLIGGYLGE---A------G--Y-----------M----------------------NV------TVA-FIIGMAGWAYILYEI-----F--A-GEAGRVASD--E-APESV-K-A-A-Y-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-a]_KJ927364 [III-Alpha1-a] PRGD_OTU008d_44eafbca667bef5d55d65239538261eb gb|KJ927364| PRGD_OTU008d_44eafbca667bef5d55d65239538261eb, putative proteorhodopsin gene, partial cds. PRGD_OTU008d_44eafbca667bef5d55d65239538261eb, putative proteorhodopsin gene, partial cds. KJ927364 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) TTAATCACAGTTCCACTATTGATGATCGAGTTCTACTTAATCCTACGAGCTATTACAAATGTATCTGGCGGCGTTTTCTGGCGTCTTACAGTTGGTACATTGATTATGCTTATCGGTGGTTACCTAGGTGAAGCTGGTTACATGAATGTAACAGTTGCTTTCATCATTGGAATGGCTGGTTGGGCATACATCTTGTATGAGATCTTCGCAGGTGAAGCTGGACGTGTTGCAGCAGACGAAGCGCCTGAGTCAGTTAAAGCAGCTTTCTCAACAATGCGTTGGATTGTAACAATC LITVPLLMIEFYLILRAITNVSGGVFWRLTVGTLIMLIGGYLGEAGYMNVTVAFIIGMAGWAYILYEIFAGEAGRVAADEAPESVKAAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTTCCACTATTGATGATCGAGTTCTACTTAATCCTACGAGCT---------ATT---ACAAATGTATCTGGC---GGCGTT------------------------------------TTCTGGCGT---CTTACAGTTGGTACATTGATTATGCTTATCGGTGGTTACCTAGGTGAA---------GCT------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGCT---TTCATCATTGGAATGGCTGGTTGGGCATACATCTTGTATGAGATC---------------TTC------GCA---GGTGAAGCTGGACGTGTTGCAGCAGAC------GAA---GCGCCTGAGTCAGTT---AAA---GCA---GCT---TTC---TCA---ACAATG---CGTTGGATTGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LTVGTLIMLIGGYLGE---A------G--Y-----------M----------------------NV------TVA-FIIGMAGWAYILYEI-----F--A-GEAGRVAAD--E-APESV-K-A-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-a]_KJ927367 [III-Alpha1-a] PRGD_OTU008d_7cf5c21298b7659a8db2648933f9c0cb gb|KJ927367| PRGD_OTU008d_7cf5c21298b7659a8db2648933f9c0cb, putative proteorhodopsin gene, partial cds. PRGD_OTU008d_7cf5c21298b7659a8db2648933f9c0cb, putative proteorhodopsin gene, partial cds. KJ927367 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508) TTAATCACAGTTCCATTATTGATGATCGAGTTCTACTTAATCCTGCGAGCTATTACAAATGTATCTGGCGGCGTTTTCTGGCGTCTTACAGTCGGTACATTGATTATGCTTATCGGTGGTTACCTAGGTGAAGCTGGTTACATGAATGTAACAGTTGCTTTCATCATTGGAATGGCTGGTTGGGCATACATCTTGTATGAAATCTTCGCAGGTGAAGCTGGACGTGTTGCAGCAGACGAAGCACCAGAGTCAGTTAAAGCAGCTTACTCAACAATGCGTTGGATTGTAACAATC LITVPLLMIEFYLILRAITNVSGGVFWRLTVGTLIMLIGGYLGEAGYMNVTVAFIIGMAGWAYILYEIFAGEAGRVAADEAPESVKAAYSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTTCCATTATTGATGATCGAGTTCTACTTAATCCTGCGAGCT---------ATT---ACAAATGTATCTGGC---GGCGTT------------------------------------TTCTGGCGT---CTTACAGTCGGTACATTGATTATGCTTATCGGTGGTTACCTAGGTGAA---------GCT------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGCT---TTCATCATTGGAATGGCTGGTTGGGCATACATCTTGTATGAAATC---------------TTC------GCA---GGTGAAGCTGGACGTGTTGCAGCAGAC------GAA---GCACCAGAGTCAGTT---AAA---GCA---GCT---TAC---TCA---ACAATG---CGTTGGATTGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LTVGTLIMLIGGYLGE---A------G--Y-----------M----------------------NV------TVA-FIIGMAGWAYILYEI-----F--A-GEAGRVAAD--E-APESV-K-A-A-Y-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-a]_KJ927371 [III-Alpha1-a] PRGD_OTU008d_bf1975c67dd685c4876ddc441c7eb155 gb|KJ927371| PRGD_OTU008d_bf1975c67dd685c4876ddc441c7eb155, putative proteorhodopsin gene, partial cds. PRGD_OTU008d_bf1975c67dd685c4876ddc441c7eb155, putative proteorhodopsin gene, partial cds. KJ927371 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATCACAGTTCCACTATTGATGATCGAGTTCTACTTAATCCTACGAGCTATTACAAATGTATCTAGCGGCGTTTTCTGGCGTCTCACAATCGGTACATTAATTATGCTTATCGGTGGTTACCTAGGTGAAGCTAATTACTTACCCGCAACAGTTGCTTTCATCATTGGAATGGCTGGTTGGGCATACATATTGTATGAAATCTTCGCAGGTGAAGCTGGACGTGTTGCAGCAGACGAAGCACCAGAGTCAGTTAAAGCAGCTTACTCAACAATGCGTTGGATTGTAACAATC LITVPLLMIEFYLILRAITNVSSGVFWRLTIGTLIMLIGGYLGEANYLPATVAFIIGMAGWAYILYEIFAGEAGRVAADEAPESVKAAYSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTTCCACTATTGATGATCGAGTTCTACTTAATCCTACGAGCT---------ATT---ACAAATGTATCTAGC---GGCGTT------------------------------------TTCTGGCGT---CTCACAATCGGTACATTAATTATGCTTATCGGTGGTTACCTAGGTGAA---------GCT------------------AAT------TAC---------------------------------TTA------------------------------------------------------------------CCCGCA------------------ACAGTTGCT---TTCATCATTGGAATGGCTGGTTGGGCATACATATTGTATGAAATC---------------TTC------GCA---GGTGAAGCTGGACGTGTTGCAGCAGAC------GAA---GCACCAGAGTCAGTT---AAA---GCA---GCT---TAC---TCA---ACAATG---CGTTGGATTGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSS-GV------------FWR-LTIGTLIMLIGGYLGE---A------N--Y-----------L----------------------PA------TVA-FIIGMAGWAYILYEI-----F--A-GEAGRVAAD--E-APESV-K-A-A-Y-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-a]_KJ927374 [III-Alpha1-a] PRGD_OTU008d_e40c3ee4ddc3ee7f26adb9f4f5f93a81 gb|KJ927374| PRGD_OTU008d_e40c3ee4ddc3ee7f26adb9f4f5f93a81, putative proteorhodopsin gene, partial cds. PRGD_OTU008d_e40c3ee4ddc3ee7f26adb9f4f5f93a81, putative proteorhodopsin gene, partial cds. KJ927374 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; ; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) TTAATCACAGTTCCACTATTGATGATCGAGTTCTACTTAATCCTACGAGCTATTACAAATGTATCTGGCGGCGTTTTCTGGCGTCTCACAATCGGTACATTAATTATGCTTATCGGTGGTTACCTAGGTGAAGCTGGTTACTTAAACGTAACAGTTGCTTTCATCATTGGAATGGCTGGTTGGGCATACATATTGTATGAAATCTTCGCAGGTGAAGCTGGACGTGTTGCAGCAGACGAAGCACCAGAGTCAGTTAAAGCAGCTTACTCAACAATGCGTTGGATTGTAACAATC LITVPLLMIEFYLILRAITNVSGGVFWRLTIGTLIMLIGGYLGEAGYLNVTVAFIIGMAGWAYILYEIFAGEAGRVAADEAPESVKAAYSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTTCCACTATTGATGATCGAGTTCTACTTAATCCTACGAGCT---------ATT---ACAAATGTATCTGGC---GGCGTT------------------------------------TTCTGGCGT---CTCACAATCGGTACATTAATTATGCTTATCGGTGGTTACCTAGGTGAA---------GCT------------------GGT------TAC---------------------------------TTA------------------------------------------------------------------AACGTA------------------ACAGTTGCT---TTCATCATTGGAATGGCTGGTTGGGCATACATATTGTATGAAATC---------------TTC------GCA---GGTGAAGCTGGACGTGTTGCAGCAGAC------GAA---GCACCAGAGTCAGTT---AAA---GCA---GCT---TAC---TCA---ACAATG---CGTTGGATTGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LTIGTLIMLIGGYLGE---A------G--Y-----------L----------------------NV------TVA-FIIGMAGWAYILYEI-----F--A-GEAGRVAAD--E-APESV-K-A-A-Y-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-a]_KJ927366 [III-Alpha1-a] PRGD_OTU008d_6463b24d0a5c90f5665554fdc103b97e gb|KJ927366| PRGD_OTU008d_6463b24d0a5c90f5665554fdc103b97e, putative proteorhodopsin gene, partial cds. PRGD_OTU008d_6463b24d0a5c90f5665554fdc103b97e, putative proteorhodopsin gene, partial cds. KJ927366 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATCACAGTTCCACTATTGATGATCGAGTTCTACTTAATCCTACGAGCTATTACAAATGTATCTGGCGGCGTTTTCTGGCGTCTCACAATCGGTACATTGATTATGCTTATCGGCGGTTACCTAGGTGAAGCTGGTTATTTAAACGTATTAGTTGCATTCATCATTGGAATGGCTGGTTGGGCATACATATTGTATGAAATCTTCGCAGGTGAAGCTGGACGTGTTGCAGCAGACGAAGCACCAGAGTCAGTTAAAGCAGCTTACTCAACAATGCGTTGGATTGTAACAATC LITVPLLMIEFYLILRAITNVSGGVFWRLTIGTLIMLIGGYLGEAGYLNVLVAFIIGMAGWAYILYEIFAGEAGRVAADEAPESVKAAYSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTTCCACTATTGATGATCGAGTTCTACTTAATCCTACGAGCT---------ATT---ACAAATGTATCTGGC---GGCGTT------------------------------------TTCTGGCGT---CTCACAATCGGTACATTGATTATGCTTATCGGCGGTTACCTAGGTGAA---------GCT------------------GGT------TAT---------------------------------TTA------------------------------------------------------------------AACGTA------------------TTAGTTGCA---TTCATCATTGGAATGGCTGGTTGGGCATACATATTGTATGAAATC---------------TTC------GCA---GGTGAAGCTGGACGTGTTGCAGCAGAC------GAA---GCACCAGAGTCAGTT---AAA---GCA---GCT---TAC---TCA---ACAATG---CGTTGGATTGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LTIGTLIMLIGGYLGE---A------G--Y-----------L----------------------NV------LVA-FIIGMAGWAYILYEI-----F--A-GEAGRVAAD--E-APESV-K-A-A-Y-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-a]_KJ927370 [III-Alpha1-a] PRGD_OTU008d_b5b32dc1671ed8b9e36d0ce22208c752 gb|KJ927370| PRGD_OTU008d_b5b32dc1671ed8b9e36d0ce22208c752, putative proteorhodopsin gene, partial cds. PRGD_OTU008d_b5b32dc1671ed8b9e36d0ce22208c752, putative proteorhodopsin gene, partial cds. KJ927370 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAATCACAGTTCCACTATTGATGATCGAGTTCTACTTAATCCTACGAGCTATTACAAATGTATCTGGCGGCGTTTTCTGGCGTCTCACAATCGGTACATTGATTATGCTTATCGGCGGTTACCTAGGTGAAGCTGGTTATTTAAACGTAACAGTTGCATTCATCATTGGAATGGCTGGTTGGGCATACATATTGTATGAAATCTTCGCAGGTGAAGCTGGACGTGTTGCAGCAGACGAAGCACCAGAGTCAGTTAAAGCAGCTTACTCAACAATGCGTTGGATTGTAACAATC LITVPLLMIEFYLILRAITNVSGGVFWRLTIGTLIMLIGGYLGEAGYLNVTVAFIIGMAGWAYILYEIFAGEAGRVAADEAPESVKAAYSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTTCCACTATTGATGATCGAGTTCTACTTAATCCTACGAGCT---------ATT---ACAAATGTATCTGGC---GGCGTT------------------------------------TTCTGGCGT---CTCACAATCGGTACATTGATTATGCTTATCGGCGGTTACCTAGGTGAA---------GCT------------------GGT------TAT---------------------------------TTA------------------------------------------------------------------AACGTA------------------ACAGTTGCA---TTCATCATTGGAATGGCTGGTTGGGCATACATATTGTATGAAATC---------------TTC------GCA---GGTGAAGCTGGACGTGTTGCAGCAGAC------GAA---GCACCAGAGTCAGTT---AAA---GCA---GCT---TAC---TCA---ACAATG---CGTTGGATTGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LTIGTLIMLIGGYLGE---A------G--Y-----------L----------------------NV------TVA-FIIGMAGWAYILYEI-----F--A-GEAGRVAAD--E-APESV-K-A-A-Y-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-a]_KJ927368 [III-Alpha1-a] PRGD_OTU008d_811dde32c4a2a827ab4974a5930d90c2 gb|KJ927368| PRGD_OTU008d_811dde32c4a2a827ab4974a5930d90c2, putative proteorhodopsin gene, partial cds. PRGD_OTU008d_811dde32c4a2a827ab4974a5930d90c2, putative proteorhodopsin gene, partial cds. KJ927368 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATCACAGTCCCACTATTGATGATCGAGTTCTACTTAATCCTACGAGCTATTACAAATGTATCTGGCGGCGTTTTCTGGCGTCTTACAATCGGTACATTGATTATGCTTATCGGTGGTTACCTAGGTGAAGCTGGTTACTTGAACGTAACAGTTGCTTTCATCATTGGAATGGCTGGTTGGGCATACATCTTGTATGAAATCTTCGCAGGTGAAGCTGGACGTGTTGCAGCAGACGAAGCACCAGAGTCAGTTAAAGCAGCTTACTCAACAATGCGTTGGATTGTAACAATC LITVPLLMIEFYLILRAITNVSGGVFWRLTIGTLIMLIGGYLGEAGYLNVTVAFIIGMAGWAYILYEIFAGEAGRVAADEAPESVKAAYSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTCCCACTATTGATGATCGAGTTCTACTTAATCCTACGAGCT---------ATT---ACAAATGTATCTGGC---GGCGTT------------------------------------TTCTGGCGT---CTTACAATCGGTACATTGATTATGCTTATCGGTGGTTACCTAGGTGAA---------GCT------------------GGT------TAC---------------------------------TTG------------------------------------------------------------------AACGTA------------------ACAGTTGCT---TTCATCATTGGAATGGCTGGTTGGGCATACATCTTGTATGAAATC---------------TTC------GCA---GGTGAAGCTGGACGTGTTGCAGCAGAC------GAA---GCACCAGAGTCAGTT---AAA---GCA---GCT---TAC---TCA---ACAATG---CGTTGGATTGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNVSG-GV------------FWR-LTIGTLIMLIGGYLGE---A------G--Y-----------L----------------------NV------TVA-FIIGMAGWAYILYEI-----F--A-GEAGRVAAD--E-APESV-K-A-A-Y-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-a]_KJ927369 [III-Alpha1-a] PRGD_OTU008d_a1cc6142e3c8ef3bae83161c30875ff0 gb|KJ927369| PRGD_OTU008d_a1cc6142e3c8ef3bae83161c30875ff0, putative proteorhodopsin gene, partial cds. PRGD_OTU008d_a1cc6142e3c8ef3bae83161c30875ff0, putative proteorhodopsin gene, partial cds. KJ927369 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATAACAGTTCCACTATTGATGATCGAGTTCTACATAATTTTACGAGCTATTACAAATGTATCCGGCGGCGTTTTCTGGCGCCTTACAATCGGATCGTTGATAATGCTTATCGGTGGTTACCTAGGGGAAGCTGGTTACATAAATGTAACTGTTGCTTTCATCATTGGAATCGCTGGTTGGGCGTACATTTTGTATGAAATCTTCGCAGGTGAAGCTGGACGTGTTGCAGCAGACGAAGCACCTGAGTCAGTTAAAGCAGCTTTCTCAACTATGCGTTGGATTGTAACAATT LITVPLLMIEFYIILRAITNVSGGVFWRLTIGSLIMLIGGYLGEAGYINVTVAFIIGIAGWAYILYEIFAGEAGRVAADEAPESVKAAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTTCCACTATTGATGATCGAGTTCTACATAATTTTACGAGCT---------ATT---ACAAATGTATCCGGC---GGCGTT------------------------------------TTCTGGCGC---CTTACAATCGGATCGTTGATAATGCTTATCGGTGGTTACCTAGGGGAA---------GCT------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGTA------------------ACTGTTGCT---TTCATCATTGGAATCGCTGGTTGGGCGTACATTTTGTATGAAATC---------------TTC------GCA---GGTGAAGCTGGACGTGTTGCAGCAGAC------GAA---GCACCTGAGTCAGTT---AAA---GCA---GCT---TTC---TCA---ACTATG---CGTTGGATTGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYIILRA---I-TNVSG-GV------------FWR-LTIGSLIMLIGGYLGE---A------G--Y-----------I----------------------NV------TVA-FIIGIAGWAYILYEI-----F--A-GEAGRVAAD--E-APESV-K-A-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-a]_KJ927373 [III-Alpha1-a] PRGD_OTU008d_cfc6d1356e03562ab9111fdc2c2ea658 gb|KJ927373| PRGD_OTU008d_cfc6d1356e03562ab9111fdc2c2ea658, putative proteorhodopsin gene, partial cds. PRGD_OTU008d_cfc6d1356e03562ab9111fdc2c2ea658, putative proteorhodopsin gene, partial cds. KJ927373 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/A subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73) TTAATAACAGTTCCACTATTGATGATAGAGTTCTACATAATCCTACGAGCTATTACCAATGTATCTGGCGGCGTTTTTTGGCGCCTTACAATCGGATCGTTGATAATGCTAATCGGTGGTTACCTAGGTGAGGCTGGTTACATAAATGTAACTGTTGCTTTCATCATTGGGTTGGCTGGTTGGGCGTACATTTTGTATGAGATTTTTGCAGGTGAAGCTGGACGTGTTGCAGCAGACGAAGCACCTGAGTCAGTTAAAGCAGCTTTCTCAACTATGCGTTGGATTGTATCAATT LITVPLLMIEFYIILRAITNVSGGVFWRLTIGSLIMLIGGYLGEAGYINVTVAFIIGLAGWAYILYEIFAGEAGRVAADEAPESVKAAFSTMRWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTTCCACTATTGATGATAGAGTTCTACATAATCCTACGAGCT---------ATT---ACCAATGTATCTGGC---GGCGTT------------------------------------TTTTGGCGC---CTTACAATCGGATCGTTGATAATGCTAATCGGTGGTTACCTAGGTGAG---------GCT------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------AATGTA------------------ACTGTTGCT---TTCATCATTGGGTTGGCTGGTTGGGCGTACATTTTGTATGAGATT---------------TTT------GCA---GGTGAAGCTGGACGTGTTGCAGCAGAC------GAA---GCACCTGAGTCAGTT---AAA---GCA---GCT---TTC---TCA---ACTATG---CGTTGGATTGTATCAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYIILRA---I-TNVSG-GV------------FWR-LTIGSLIMLIGGYLGE---A------G--Y-----------I----------------------NV------TVA-FIIGLAGWAYILYEI-----F--A-GEAGRVAAD--E-APESV-K-A-A-F-S-TM-RWIVSI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-MEDPR66A3]_KJ927376 [III-Alpha1-MEDPR66A3] PRGD_OTU008e_389cea23e969859ce8d4f3cabe7d8962 gb|KJ927376| PRGD_OTU008e_389cea23e969859ce8d4f3cabe7d8962, putative proteorhodopsin gene, partial cds. PRGD_OTU008e_389cea23e969859ce8d4f3cabe7d8962, putative proteorhodopsin gene, partial cds. KJ927376 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/MEDPR66A3-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 MEDPR66A3-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-14.48, 113.45; -33.28, 45.35) CTAATCACAGTGCCGCTATTGATGATTGAGTTTTACTTAATCCTGCGTGCGATTACTAATATCTCGGGTGGTGTTTTCTGGCGTCTAACTATTGGTACGCTAATCATGCTTGTAGGCGGTTATCTAGGTGAAGCAGGTTACATGAATGTAACTGTGGCATTTATCATCGGAATGGCTGGCTGGGCATACATCCTGTATGAAATTTTTGCCGGTGAAGCAGGACGTGTTGCTGCCGATGAGGCTCCAGAGTCAGTTAAATCCGCTTACTCAACAATGCGCTGGATTGTGACTATT LITVPLLMIEFYLILRAITNISGGVFWRLTIGTLIMLVGGYLGEAGYMNVTVAFIIGMAGWAYILYEIFAGEAGRVAADEAPESVKSAYSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACAGTGCCGCTATTGATGATTGAGTTTTACTTAATCCTGCGTGCG---------ATT---ACTAATATCTCGGGT---GGTGTT------------------------------------TTCTGGCGT---CTAACTATTGGTACGCTAATCATGCTTGTAGGCGGTTATCTAGGTGAA---------GCA------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTGTGGCA---TTTATCATCGGAATGGCTGGCTGGGCATACATCCTGTATGAAATT---------------TTT------GCC---GGTGAAGCAGGACGTGTTGCTGCCGAT------GAG---GCTCCAGAGTCAGTT---AAA---TCC---GCT---TAC---TCA---ACAATG---CGCTGGATTGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNISG-GV------------FWR-LTIGTLIMLVGGYLGE---A------G--Y-----------M----------------------NV------TVA-FIIGMAGWAYILYEI-----F--A-GEAGRVAAD--E-APESV-K-S-A-Y-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-Alpha1-MEDPR66A3]_KJ927375 [III-Alpha1-MEDPR66A3] PRGD_OTU008e_otuREP_7f49754f8494bbc2b35e3f337ee7fd27 gb|KJ927375| PRGD_OTU008e_otuREP_7f49754f8494bbc2b35e3f337ee7fd27, putative proteorhodopsin gene, partial cds. PRGD_OTU008e_otuREP_7f49754f8494bbc2b35e3f337ee7fd27, putative proteorhodopsin gene, partial cds. KJ927375 [[proteorhodopsin super-cluster III/Alphaproteobacterial-like cluster 1/MEDPR66A3-like subcluster]] proteorhodopsin super-cluster III Alphaproteobacterial-like cluster 1 MEDPR66A3-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATCACAGTGCCGCTATTGATGATTGAGTTTTACTTAATCCTGCGTGCGATTACTAATATCTCAGGTGGTGTTTTCTGGCGTCTAACTATCGGTACGCTAATCATGCTTGTAGGCGGTTATTTAGGTGAAGCAGGTTACATGAATGTAACTGTGGCATTTATCATCGGAATGGCTGGCTGGGCATACATCCTGTATGAAATTTTTGCAGGTGAAGCAGGACGTGTTGCTGCCGATGAGGCTCCAGAGTCAGTTAAATCCGCTTACTCAACAATGCGTTGGATTGTGACTATT LITVPLLMIEFYLILRAITNISGGVFWRLTIGTLIMLVGGYLGEAGYMNVTVAFIIGMAGWAYILYEIFAGEAGRVAADEAPESVKSAYSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACAGTGCCGCTATTGATGATTGAGTTTTACTTAATCCTGCGTGCG---------ATT---ACTAATATCTCAGGT---GGTGTT------------------------------------TTCTGGCGT---CTAACTATCGGTACGCTAATCATGCTTGTAGGCGGTTATTTAGGTGAA---------GCA------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTGTGGCA---TTTATCATCGGAATGGCTGGCTGGGCATACATCCTGTATGAAATT---------------TTT------GCA---GGTGAAGCAGGACGTGTTGCTGCCGAT------GAG---GCTCCAGAGTCAGTT---AAA---TCC---GCT---TAC---TCA---ACAATG---CGTTGGATTGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---I-TNISG-GV------------FWR-LTIGTLIMLVGGYLGE---A------G--Y-----------M----------------------NV------TVA-FIIGMAGWAYILYEI-----F--A-GEAGRVAAD--E-APESV-K-S-A-Y-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III]_KJ929926 [III] PRGD_OTU377_otuREP_36918dffec06d68cee0fea388fd9e4a8 gb|KJ929926| PRGD_OTU377_otuREP_36918dffec06d68cee0fea388fd9e4a8, putative proteorhodopsin gene, partial cds. PRGD_OTU377_otuREP_36918dffec06d68cee0fea388fd9e4a8, putative proteorhodopsin gene, partial cds. KJ929926 [[proteorhodopsin super-cluster III]] proteorhodopsin super-cluster III proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCATAACCGTGCCCCTACAACTTATCGAATTCTATCTTATTTTAGCTGCATGTACTGCCATCACTATAGGTGTTTTTTGGCGCTTATTCATAGGTTCTCTCGTAATGCTCATCAGTGGTTTTCTGGGAGAAACATCAACGATTAATGCAGGACTAGGCCTACTCATTGGCATGCTAGCTTGGCTTTATATTCTGTATCAATTATTTTATGGGTCAGCAGCATCTTTTGCCCAAAGTAATGCTCCTAAAAATGTATTAACCTCTTACTCAATCATGAAATGGATTGTTACTGTT LITVPLQLIEFYLILAACTAITIGVFWRLFIGSLVMLISGFLGETSTINAGLGLLIGMLAWLYILYQLFYGSAASFAQSNAPKNVLTSYSIMKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATAACCGTGCCCCTACAACTTATCGAATTCTATCTTATTTTAGCTGCA---------TGT---ACTGCCATCACTATA---GGTGTT------------------------------------TTTTGGCGC---TTATTCATAGGTTCTCTCGTAATGCTCATCAGTGGTTTTCTGGGAGAA---------ACA------------------TCA------ACG---------------------------------ATT------------------------------------------------------------------AATGCA------------------GGACTAGGC---CTACTCATTGGCATGCTAGCTTGGCTTTATATTCTGTATCAATTA---------------TTT------TAT---GGGTCAGCAGCATCTTTTGCCCAAAGT------AAT---GCTCCTAAAAATGTA---TTA---ACC---TCT---TAC---TCA---ATCATG---AAATGGATTGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQLIEFYLILAA---C-TAITI-GV------------FWR-LFIGSLVMLISGFLGE---T------S--T-----------I----------------------NA------GLG-LLIGMLAWLYILYQL-----F--Y-GSAASFAQS--N-APKNV-L-T-S-Y-S-IM-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [III]_KJ929823 [III] PRGD_OTU274_otuREP_5842f9e415bf3c8966750cc35ddcc736 gb|KJ929823| PRGD_OTU274_otuREP_5842f9e415bf3c8966750cc35ddcc736, putative proteorhodopsin gene, partial cds. PRGD_OTU274_otuREP_5842f9e415bf3c8966750cc35ddcc736, putative proteorhodopsin gene, partial cds. KJ929823 [[proteorhodopsin super-cluster III]] proteorhodopsin super-cluster III proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATCACAGTTCCATTACAAATGATTGAGTTTTATCTGATTTTATCCGCTGTAACCGCCGTCGCTTTTGGTGTCTTTTGGAGATTGTTAATTGGTACATTGGTCATGCTCCTTGGTGGGTATTTAGGAGAAGCTGGTTTCATTAACAGCACTACGGGTTTCGTTATTGGAATGCTCGGTTGGTTTTTCATTCTATATGAAATCTTTTTTGGAGAGGCATCCAAGATATCTGCAAATAGCGCACCTCCATCGGTTCAATCAGCATTTTCAGCTATGAAATGGATTGTCACGATT LITVPLQMIEFYLILSAVTAVAFGVFWRLLIGTLVMLLGGYLGEAGFINSTTGFVIGMLGWFFILYEIFFGEASKISANSAPPSVQSAFSAMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTTCCATTACAAATGATTGAGTTTTATCTGATTTTATCCGCT---------GTA---ACCGCCGTCGCTTTT---GGTGTC------------------------------------TTTTGGAGA---TTGTTAATTGGTACATTGGTCATGCTCCTTGGTGGGTATTTAGGAGAA---------GCT------------------GGT------TTC---------------------------------ATT------------------------------------------------------------------AACAGC------------------ACTACGGGT---TTCGTTATTGGAATGCTCGGTTGGTTTTTCATTCTATATGAAATC---------------TTT------TTT---GGAGAGGCATCCAAGATATCTGCAAAT------AGC---GCACCTCCATCGGTT---CAA---TCA---GCA---TTT---TCA---GCTATG---AAATGGATTGTCACGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILSA---V-TAVAF-GV------------FWR-LLIGTLVMLLGGYLGE---A------G--F-----------I----------------------NS------TTG-FVIGMLGWFFILYEI-----F--F-GEASKISAN--S-APPSV-Q-S-A-F-S-AM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-env9]_KJ929383 [III-env9] PRGD_OTU114_3e77e85027c248e56f05157bb896ac0f gb|KJ929383| PRGD_OTU114_3e77e85027c248e56f05157bb896ac0f, putative proteorhodopsin gene, partial cds. PRGD_OTU114_3e77e85027c248e56f05157bb896ac0f, putative proteorhodopsin gene, partial cds. KJ929383 [[proteorhodopsin super-cluster III/env cluster 9]] proteorhodopsin super-cluster III env cluster 9 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACCGTTCCATTATTAATGGTAGAATTTTATATAATTCTTAGAGCATGTACAGCTGTTGCTGGTGGTGTTTTTTGGAAATTAATGATTGGTTCATTGGTTATGCTTGTCGGTGGATATTTAGGTGAAGCTGGATACATGAACGTAACACTAGGTTTTGTTATAGGAATGGTTGGTTGGATATACATTCTATATGAAGTTTTTGCTGGTGAAGCAAGCAAAGCTAGTGAAGAAGCTCCAGAGTCAGTTAGATCAGCTTTCTCTACAATGAGATGGATTGTTACAATT LITVPLLMVEFYIILRACTAVAGGVFWKLMIGSLVMLVGGYLGEAGYMNVTLGFVIGMVGWIYILYEVFAGEASKASEEAPESVRSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACCGTTCCATTATTAATGGTAGAATTTTATATAATTCTTAGAGCA---------TGT---ACAGCTGTTGCTGGT---GGTGTT------------------------------------TTTTGGAAA---TTAATGATTGGTTCATTGGTTATGCTTGTCGGTGGATATTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------AACGTA------------------ACACTAGGT---TTTGTTATAGGAATGGTTGGTTGGATATACATTCTATATGAAGTT---------------TTT------GCT---GGTGAAGCAAGCAAAGCT---AGTGAA------GAA---GCTCCAGAGTCAGTT---AGA---TCA---GCT---TTC---TCT---ACAATG---AGATGGATTGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYIILRA---C-TAVAG-GV------------FWK-LMIGSLVMLVGGYLGE---A------G--Y-----------M----------------------NV------TLG-FVIGMVGWIYILYEV-----F--A-GEASKA-SE--E-APESV-R-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-env9]_KJ929385 [III-env9] PRGD_OTU114_d7ba9451efa8f208d22d237f3c0029e3 gb|KJ929385| PRGD_OTU114_d7ba9451efa8f208d22d237f3c0029e3, putative proteorhodopsin gene, partial cds. PRGD_OTU114_d7ba9451efa8f208d22d237f3c0029e3, putative proteorhodopsin gene, partial cds. KJ929385 [[proteorhodopsin super-cluster III/env cluster 9]] proteorhodopsin super-cluster III env cluster 9 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185), English Channel (48.7717, -3.9683) TTAATTACAGTTCCATTATTAATGATTGAATTTTATATCATTTTAAGAGCGTGTACTAAGGTTTCTGGTGGAGTTTTCTGGAAATTAATGATTGGTTCTTTAGTAATGTTGGTAGGTGGATATCTTGGAGAAGCAGGATACATCAACACAACATTAGGTTTTGTAATCGGAATGGTTGGTTGGATCTATATCTTATATGAAATCTTTGCTGGTGAAGCAAGTAAGGCTAGTGAAGAAGCTCCAGAATCAGTTCGTTCAGCATTTAATACAATGCGATGGATTGTAACTATT LITVPLLMIEFYIILRACTKVSGGVFWKLMIGSLVMLVGGYLGEAGYINTTLGFVIGMVGWIYILYEIFAGEASKASEEAPESVRSAFNTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCATTATTAATGATTGAATTTTATATCATTTTAAGAGCG---------TGT---ACTAAGGTTTCTGGT---GGAGTT------------------------------------TTCTGGAAA---TTAATGATTGGTTCTTTAGTAATGTTGGTAGGTGGATATCTTGGAGAA---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AACACA------------------ACATTAGGT---TTTGTAATCGGAATGGTTGGTTGGATCTATATCTTATATGAAATC---------------TTT------GCT---GGTGAAGCAAGTAAGGCT---AGTGAA------GAA---GCTCCAGAATCAGTT---CGT---TCA---GCA---TTT---AAT---ACAATG---CGATGGATTGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYIILRA---C-TKVSG-GV------------FWK-LMIGSLVMLVGGYLGE---A------G--Y-----------I----------------------NT------TLG-FVIGMVGWIYILYEI-----F--A-GEASKA-SE--E-APESV-R-S-A-F-N-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-env9]_KJ929380 [III-env9] PRGD_OTU114_otuREP_9cc3183a43befbc14848d1503863886c gb|KJ929380| PRGD_OTU114_otuREP_9cc3183a43befbc14848d1503863886c, putative proteorhodopsin gene, partial cds. PRGD_OTU114_otuREP_9cc3183a43befbc14848d1503863886c, putative proteorhodopsin gene, partial cds. KJ929380 [[proteorhodopsin super-cluster III/env cluster 9]] proteorhodopsin super-cluster III env cluster 9 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) TTAATTACTGTTCCGTTATTAATGGTAGAATTCTATATTATTCTAAGAGCTTGTACAGCTGTAGCTGGAGGCGTGTTCTGGAAGTTAATGATAGGTTCATTAGTAATGTTAGTTGGTGGATATTTAGGTGAAGCTGGATACATGAATGCTACACTTGGATTTGTTATAGGAATGGTTGGTTGGATATACATCTTATATGAAATCTTTGCAGGTGAAGCTAGTAAAGCAAGTGAAGAGGCTCCAGAGTCTGTCAGATCAGCTTTCTCAACAATGAGATGGATTGTTACAATC LITVPLLMVEFYIILRACTAVAGGVFWKLMIGSLVMLVGGYLGEAGYMNATLGFVIGMVGWIYILYEIFAGEASKASEEAPESVRSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTTCCGTTATTAATGGTAGAATTCTATATTATTCTAAGAGCT---------TGT---ACAGCTGTAGCTGGA---GGCGTG------------------------------------TTCTGGAAG---TTAATGATAGGTTCATTAGTAATGTTAGTTGGTGGATATTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------AATGCT------------------ACACTTGGA---TTTGTTATAGGAATGGTTGGTTGGATATACATCTTATATGAAATC---------------TTT------GCA---GGTGAAGCTAGTAAAGCA---AGTGAA------GAG---GCTCCAGAGTCTGTC---AGA---TCA---GCT---TTC---TCA---ACAATG---AGATGGATTGTTACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYIILRA---C-TAVAG-GV------------FWK-LMIGSLVMLVGGYLGE---A------G--Y-----------M----------------------NA------TLG-FVIGMVGWIYILYEI-----F--A-GEASKA-SE--E-APESV-R-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-env9]_KJ929384 [III-env9] PRGD_OTU114_c8daf7d88532264f25bca81884d87fd6 gb|KJ929384| PRGD_OTU114_c8daf7d88532264f25bca81884d87fd6, putative proteorhodopsin gene, partial cds. PRGD_OTU114_c8daf7d88532264f25bca81884d87fd6, putative proteorhodopsin gene, partial cds. KJ929384 [[proteorhodopsin super-cluster III/env cluster 9]] proteorhodopsin super-cluster III env cluster 9 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAATTACTGTTCCGTTATTAATGGTAGAATTCTATATTATTCTAAGAGCTTGTACAGCTGTAGCTGGAGGCGTGTTCTGGAAGTTAATGATAGGTTCACTAGTAATGTTAGTTGGTGGATACTTAGGTGAAGCTGGATACATGAATGCTACACTTGGATTTGTTATAGGAATGGTTGGTTGGATATACATCTTATATGAAATCTTTGCAGGTGAAGCTAGTAAAGCAAGTGAAGAGGCTCCAGAGTCTGTAAGATCAGCTTTCTCAACAATGAGATGGATTGTTACAATC LITVPLLMVEFYIILRACTAVAGGVFWKLMIGSLVMLVGGYLGEAGYMNATLGFVIGMVGWIYILYEIFAGEASKASEEAPESVRSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTTCCGTTATTAATGGTAGAATTCTATATTATTCTAAGAGCT---------TGT---ACAGCTGTAGCTGGA---GGCGTG------------------------------------TTCTGGAAG---TTAATGATAGGTTCACTAGTAATGTTAGTTGGTGGATACTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------AATGCT------------------ACACTTGGA---TTTGTTATAGGAATGGTTGGTTGGATATACATCTTATATGAAATC---------------TTT------GCA---GGTGAAGCTAGTAAAGCA---AGTGAA------GAG---GCTCCAGAGTCTGTA---AGA---TCA---GCT---TTC---TCA---ACAATG---AGATGGATTGTTACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYIILRA---C-TAVAG-GV------------FWK-LMIGSLVMLVGGYLGE---A------G--Y-----------M----------------------NA------TLG-FVIGMVGWIYILYEI-----F--A-GEASKA-SE--E-APESV-R-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-env9]_KJ929381 [III-env9] PRGD_OTU114_1559cb674523f74f78c49ef268931ada gb|KJ929381| PRGD_OTU114_1559cb674523f74f78c49ef268931ada, putative proteorhodopsin gene, partial cds. PRGD_OTU114_1559cb674523f74f78c49ef268931ada, putative proteorhodopsin gene, partial cds. KJ929381 [[proteorhodopsin super-cluster III/env cluster 9]] proteorhodopsin super-cluster III env cluster 9 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683) TTAATTACTGTTCCATTATTAATGGTAGAATTCTATATTATTCTAAGAGCTTGTACAGCTGTAGCTGGAGGCGTGTTCTGGAAGTTAATGATAGGTTCATTAGTAATGTTAATTGGTGGATATTTAGGTGAAGCTGGATACATCAATACTACACTTGGATTTGTTATAGGAATGGTTGGTTGGATATACATCTTATATGAAATCTTTGCTGGTGAAGCAAGCAAAGCAAGTGAAGAAGCTCCAGAATCAGTTAGATCTGCTTTCTCAACAATGAGATGGATTGTAACAATC LITVPLLMVEFYIILRACTAVAGGVFWKLMIGSLVMLIGGYLGEAGYINTTLGFVIGMVGWIYILYEIFAGEASKASEEAPESVRSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTTCCATTATTAATGGTAGAATTCTATATTATTCTAAGAGCT---------TGT---ACAGCTGTAGCTGGA---GGCGTG------------------------------------TTCTGGAAG---TTAATGATAGGTTCATTAGTAATGTTAATTGGTGGATATTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------AATACT------------------ACACTTGGA---TTTGTTATAGGAATGGTTGGTTGGATATACATCTTATATGAAATC---------------TTT------GCT---GGTGAAGCAAGCAAAGCA---AGTGAA------GAA---GCTCCAGAATCAGTT---AGA---TCT---GCT---TTC---TCA---ACAATG---AGATGGATTGTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYIILRA---C-TAVAG-GV------------FWK-LMIGSLVMLIGGYLGE---A------G--Y-----------I----------------------NT------TLG-FVIGMVGWIYILYEI-----F--A-GEASKA-SE--E-APESV-R-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-env9]_KJ929382 [III-env9] PRGD_OTU114_2e52d8691f3e37ce0ee8e7f9fe51a2f4 gb|KJ929382| PRGD_OTU114_2e52d8691f3e37ce0ee8e7f9fe51a2f4, putative proteorhodopsin gene, partial cds. PRGD_OTU114_2e52d8691f3e37ce0ee8e7f9fe51a2f4, putative proteorhodopsin gene, partial cds. KJ929382 [[proteorhodopsin super-cluster III/env cluster 9]] proteorhodopsin super-cluster III env cluster 9 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833) TTAATTACTGTTCCATTATTAATGGTAGAATTCTATATTATTCTAAGAGCTTGTACAGCTGTAGCTGGAGGCGTGTTCTGGAAGTTAATGATAGGTTCATTAGTAATGTTAATCGGTGGATATATGGGTGAAGCCGGATACATGAATGCAACACTTGGTTTTGTTATCGGAATGGTTGGATGGATTTATATCTTGTATGAAATATTTGCTGGTGAAGCAAGTAAAGCAAGTGAAGAAGCTCCAGAATCAGTTAGATCTGCTTTCTCAACAATGAGATGGATTGTTACAATT LITVPLLMVEFYIILRACTAVAGGVFWKLMIGSLVMLIGGYMGEAGYMNATLGFVIGMVGWIYILYEIFAGEASKASEEAPESVRSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTTCCATTATTAATGGTAGAATTCTATATTATTCTAAGAGCT---------TGT---ACAGCTGTAGCTGGA---GGCGTG------------------------------------TTCTGGAAG---TTAATGATAGGTTCATTAGTAATGTTAATCGGTGGATATATGGGTGAA---------GCC------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------AATGCA------------------ACACTTGGT---TTTGTTATCGGAATGGTTGGATGGATTTATATCTTGTATGAAATA---------------TTT------GCT---GGTGAAGCAAGTAAAGCA---AGTGAA------GAA---GCTCCAGAATCAGTT---AGA---TCT---GCT---TTC---TCA---ACAATG---AGATGGATTGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYIILRA---C-TAVAG-GV------------FWK-LMIGSLVMLIGGYMGE---A------G--Y-----------M----------------------NA------TLG-FVIGMVGWIYILYEI-----F--A-GEASKA-SE--E-APESV-R-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-env9]_KJ929950 [III-env9] PRGD_OTU381_otuREP_00872cc2d3cfa6cdb49b12c9cc24df19 gb|KJ929950| PRGD_OTU381_otuREP_00872cc2d3cfa6cdb49b12c9cc24df19, putative proteorhodopsin gene, partial cds. PRGD_OTU381_otuREP_00872cc2d3cfa6cdb49b12c9cc24df19, putative proteorhodopsin gene, partial cds. KJ929950 [[proteorhodopsin super-cluster III/env cluster 9]] proteorhodopsin super-cluster III env cluster 9 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683) TTGATTACTGTACCACTTCTCATGGTTGAGTTTTACTTAATACTTCGTGCGATTGGTCAAGCATCAGCGGGCATATTCTGGCGTTTAATGATAGGCACTTTAGTAATGCTTGTCGGAGGTTATGCCGGTGAAGTTGGTTATATAGATGTTTGGCCTGCATTTATTATTGGAATGGCTGGTTGGGCATTCATTCTTTATGAAATCTTTCTTGGTGAAGCTGGTAAAATGTCTGCCAATCATGCCCCAGAATCTGTTAAATCTGCATTCTCTACAATGCGATGGATTGTGACTATT LITVPLLMVEFYLILRAIGQASAGIFWRLMIGTLVMLVGGYAGEVGYIDVWPAFIIGMAGWAFILYEIFLGEAGKMSANHAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTACCACTTCTCATGGTTGAGTTTTACTTAATACTTCGTGCG---------ATT---GGTCAAGCATCAGCG---GGCATA------------------------------------TTCTGGCGT---TTAATGATAGGCACTTTAGTAATGCTTGTCGGAGGTTATGCCGGTGAA---------GTT------------------GGT------TAT---------------------------------ATA------------------------------------------------------------------GATGTT------------------TGGCCTGCA---TTTATTATTGGAATGGCTGGTTGGGCATTCATTCTTTATGAAATC---------------TTT------CTT---GGTGAAGCTGGTAAAATGTCTGCCAAT------CAT---GCCCCAGAATCTGTT---AAA---TCT---GCA---TTC---TCT---ACAATG---CGATGGATTGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-GQASA-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------DV------WPA-FIIGMAGWAFILYEI-----F--L-GEAGKMSAN--H-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-env9]_KJ929955 [III-env9] PRGD_OTU381_c428132bb74d662553b09d8982008689 gb|KJ929955| PRGD_OTU381_c428132bb74d662553b09d8982008689, putative proteorhodopsin gene, partial cds. PRGD_OTU381_c428132bb74d662553b09d8982008689, putative proteorhodopsin gene, partial cds. KJ929955 [[proteorhodopsin super-cluster III/env cluster 9]] proteorhodopsin super-cluster III env cluster 9 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12) TTGATTACTGTACCACTTCTTATGGTTGAGTTTTACTTAATACTTCGTGCGATTGGTCAAGCATCAGCGGGCATATTCTGGCGTTTAATGATAGGCACTTTAGTAATGCTAGTCGGAGGTTATGCTGGTGAAGTTGGTTATATTGATGTATGGCCTGCATTTATTATTGGAATGGCTGGTTGGGCATTCATTCTTTATGAAATCTTTGCTGGCGAAGCTGGTAAAATGTCTGCCAATCATGCCCCAGAATCTGTTAAATCTGCATTCTCTACAATGCGATGGATTGTGACTATT LITVPLLMVEFYLILRAIGQASAGIFWRLMIGTLVMLVGGYAGEVGYIDVWPAFIIGMAGWAFILYEIFAGEAGKMSANHAPESVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTACCACTTCTTATGGTTGAGTTTTACTTAATACTTCGTGCG---------ATT---GGTCAAGCATCAGCG---GGCATA------------------------------------TTCTGGCGT---TTAATGATAGGCACTTTAGTAATGCTAGTCGGAGGTTATGCTGGTGAA---------GTT------------------GGT------TAT---------------------------------ATT------------------------------------------------------------------GATGTA------------------TGGCCTGCA---TTTATTATTGGAATGGCTGGTTGGGCATTCATTCTTTATGAAATC---------------TTT------GCT---GGCGAAGCTGGTAAAATGTCTGCCAAT------CAT---GCCCCAGAATCTGTT---AAA---TCT---GCA---TTC---TCT---ACAATG---CGATGGATTGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-GQASA-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------DV------WPA-FIIGMAGWAFILYEI-----F--A-GEAGKMSAN--H-APESV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-env9]_KJ929953 [III-env9] PRGD_OTU381_5d64b9d2cb557dbb4759319d51f1a0e9 gb|KJ929953| PRGD_OTU381_5d64b9d2cb557dbb4759319d51f1a0e9, putative proteorhodopsin gene, partial cds. PRGD_OTU381_5d64b9d2cb557dbb4759319d51f1a0e9, putative proteorhodopsin gene, partial cds. KJ929953 [[proteorhodopsin super-cluster III/env cluster 9]] proteorhodopsin super-cluster III env cluster 9 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264) TTGATTACTGTACCACTTCTTATGGTTGAGTTTTACTTAATTCTTCGTGCGATTGGTCAAGCATCAGCAGGCATATTTTGGCGTTTAATGATAGGCACTTTAGTAATGCTAGTCGGAGGTTATGCTGGTGAAGTTGGTTACATAGATGTTTGGCCTGCATTTATTATTGGAATGGCTGGTTGGGCATTCATTCTTTATGAAATTTTTGCTGGCGAAGCTGGTAAAATGTCCGCAAATCATGCCCCCGAATCTGTTAAATCTGCATTCTCTACAATGCGATTGATTGTGACTATT LITVPLLMVEFYLILRAIGQASAGIFWRLMIGTLVMLVGGYAGEVGYIDVWPAFIIGMAGWAFILYEIFAGEAGKMSANHAPESVKSAFSTMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTACCACTTCTTATGGTTGAGTTTTACTTAATTCTTCGTGCG---------ATT---GGTCAAGCATCAGCA---GGCATA------------------------------------TTTTGGCGT---TTAATGATAGGCACTTTAGTAATGCTAGTCGGAGGTTATGCTGGTGAA---------GTT------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------GATGTT------------------TGGCCTGCA---TTTATTATTGGAATGGCTGGTTGGGCATTCATTCTTTATGAAATT---------------TTT------GCT---GGCGAAGCTGGTAAAATGTCCGCAAAT------CAT---GCCCCCGAATCTGTT---AAA---TCT---GCA---TTC---TCT---ACAATG---CGATTGATTGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-GQASA-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------DV------WPA-FIIGMAGWAFILYEI-----F--A-GEAGKMSAN--H-APESV-K-S-A-F-S-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-env9]_KJ929954 [III-env9] PRGD_OTU381_a24ced3d354ad1da9cb4bef81eb9f6a1 gb|KJ929954| PRGD_OTU381_a24ced3d354ad1da9cb4bef81eb9f6a1, putative proteorhodopsin gene, partial cds. PRGD_OTU381_a24ced3d354ad1da9cb4bef81eb9f6a1, putative proteorhodopsin gene, partial cds. KJ929954 [[proteorhodopsin super-cluster III/env cluster 9]] proteorhodopsin super-cluster III env cluster 9 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264), Indian Ocean (-14.48, 113.45) TTGATTACTGTACCACTTCTCATGGTTGAGTTTTACTTAATTCTTCGTGCGATTGGTCAAGCATCAGCAGGCATATTCTGGCGTTTAATGATAGGCACTTTAGTAATGCTAGTTGGAGGTTATGCTGGTGAAGTTGGTTATATAGATGTTTGGCCTGCATTTATTATTGGAATGGCTGGTTGGGCATTCATTCTTTATGAAATTTTTGCTGGCGAAGCTGGTAAAATGTCCGCAAATCATGCCCCAGAATCTGTTAAATCTGCATTCTCTACAATGCGATTGATTGTGACTATT LITVPLLMVEFYLILRAIGQASAGIFWRLMIGTLVMLVGGYAGEVGYIDVWPAFIIGMAGWAFILYEIFAGEAGKMSANHAPESVKSAFSTMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTACCACTTCTCATGGTTGAGTTTTACTTAATTCTTCGTGCG---------ATT---GGTCAAGCATCAGCA---GGCATA------------------------------------TTCTGGCGT---TTAATGATAGGCACTTTAGTAATGCTAGTTGGAGGTTATGCTGGTGAA---------GTT------------------GGT------TAT---------------------------------ATA------------------------------------------------------------------GATGTT------------------TGGCCTGCA---TTTATTATTGGAATGGCTGGTTGGGCATTCATTCTTTATGAAATT---------------TTT------GCT---GGCGAAGCTGGTAAAATGTCCGCAAAT------CAT---GCCCCAGAATCTGTT---AAA---TCT---GCA---TTC---TCT---ACAATG---CGATTGATTGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-GQASA-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------DV------WPA-FIIGMAGWAFILYEI-----F--A-GEAGKMSAN--H-APESV-K-S-A-F-S-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-env9]_KJ929951 [III-env9] PRGD_OTU381_3812fabf788f5825db3b6ea898b4f5f5 gb|KJ929951| PRGD_OTU381_3812fabf788f5825db3b6ea898b4f5f5, putative proteorhodopsin gene, partial cds. PRGD_OTU381_3812fabf788f5825db3b6ea898b4f5f5, putative proteorhodopsin gene, partial cds. KJ929951 [[proteorhodopsin super-cluster III/env cluster 9]] proteorhodopsin super-cluster III env cluster 9 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12) TTGATTACTGTACCACTTCTCATGGTTGAGTTTTACTTAATTCTTCGTGCGATTGGTCAAGCATCAGCGGGCATATTCTGGCGTTTAATGATAGGCACTTTAGTAATGCTAGTCGGAGGTTATGCTGGTGAAGTTGGTTATATAGATGTTTGGCCTGCATTTATTATTGGAATGGCTGGTTGGGCATTCATTCTTTATGAAATTTTTGCTGGCGAAGCTGGTAAAATGTCCGCAAATCATGCTCCAGAATCTGTTAAATCTGCATTCTCTACAATGCGCTTGATTGTGACTATT LITVPLLMVEFYLILRAIGQASAGIFWRLMIGTLVMLVGGYAGEVGYIDVWPAFIIGMAGWAFILYEIFAGEAGKMSANHAPESVKSAFSTMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTACCACTTCTCATGGTTGAGTTTTACTTAATTCTTCGTGCG---------ATT---GGTCAAGCATCAGCG---GGCATA------------------------------------TTCTGGCGT---TTAATGATAGGCACTTTAGTAATGCTAGTCGGAGGTTATGCTGGTGAA---------GTT------------------GGT------TAT---------------------------------ATA------------------------------------------------------------------GATGTT------------------TGGCCTGCA---TTTATTATTGGAATGGCTGGTTGGGCATTCATTCTTTATGAAATT---------------TTT------GCT---GGCGAAGCTGGTAAAATGTCCGCAAAT------CAT---GCTCCAGAATCTGTT---AAA---TCT---GCA---TTC---TCT---ACAATG---CGCTTGATTGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-GQASA-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------DV------WPA-FIIGMAGWAFILYEI-----F--A-GEAGKMSAN--H-APESV-K-S-A-F-S-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-env9]_KJ929952 [III-env9] PRGD_OTU381_3c56e6dae05c555ea5dbe01bb91b2a02 gb|KJ929952| PRGD_OTU381_3c56e6dae05c555ea5dbe01bb91b2a02, putative proteorhodopsin gene, partial cds. PRGD_OTU381_3c56e6dae05c555ea5dbe01bb91b2a02, putative proteorhodopsin gene, partial cds. KJ929952 [[proteorhodopsin super-cluster III/env cluster 9]] proteorhodopsin super-cluster III env cluster 9 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; ; 67.49, -168.12) TTAATTACTGTTCCACTTCTCATGGTTGAGTTTTACTTAATTCTTCGTGCGATCGGTCAAGCATCAGCGGGCATATTCTGGCGTTTAATGATAGGCACTTTAGTAATGCTAGTCGGAGGTTATGCTGGTGAAGTTGGTTACATAGATGTTTGGCCTGCATTTATTATTGGAATGGCTGGTTGGGCATTCATTCTTTATGAAATTTTTGCTGGCGAAGCTGGTAAAATGTCCGCAAATCATGCTCCAGAATCTGTTAAATCTGCATTCTCTACAATGCGCTTGATTGTAACTATT LITVPLLMVEFYLILRAIGQASAGIFWRLMIGTLVMLVGGYAGEVGYIDVWPAFIIGMAGWAFILYEIFAGEAGKMSANHAPESVKSAFSTMRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTTCCACTTCTCATGGTTGAGTTTTACTTAATTCTTCGTGCG---------ATC---GGTCAAGCATCAGCG---GGCATA------------------------------------TTCTGGCGT---TTAATGATAGGCACTTTAGTAATGCTAGTCGGAGGTTATGCTGGTGAA---------GTT------------------GGT------TAC---------------------------------ATA------------------------------------------------------------------GATGTT------------------TGGCCTGCA---TTTATTATTGGAATGGCTGGTTGGGCATTCATTCTTTATGAAATT---------------TTT------GCT---GGCGAAGCTGGTAAAATGTCCGCAAAT------CAT---GCTCCAGAATCTGTT---AAA---TCT---GCA---TTC---TCT---ACAATG---CGCTTGATTGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYLILRA---I-GQASA-GI------------FWR-LMIGTLVMLVGGYAGE---V------G--Y-----------I----------------------DV------WPA-FIIGMAGWAFILYEI-----F--A-GEAGKMSAN--H-APESV-K-S-A-F-S-TM-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-env9]_KJ929560 [III-env9] PRGD_OTU153_4f27781a110f649d81a241fc8fc3fe58 gb|KJ929560| PRGD_OTU153_4f27781a110f649d81a241fc8fc3fe58, putative proteorhodopsin gene, partial cds. PRGD_OTU153_4f27781a110f649d81a241fc8fc3fe58, putative proteorhodopsin gene, partial cds. KJ929560 [[proteorhodopsin super-cluster III/env cluster 9]] proteorhodopsin super-cluster III env cluster 9 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; ; 67.49, -168.12) TTAATTACTGTTCCACTTCTTATGGTCGAGTTTTACATAATTCTGCGTGCAGTTGGTGCAGCATCATCGATGATCTTCTGGAAGTTGATGATTGGTACTTTGGTTATGTTGGCTGGCGGTTACGCTGGTGAAGCAGGATATCTGCCAGTTTGGCCAGCATTCATTATCGGAATGGCGGGTTGGGCGTTCATTCTGTATGAAATCTTTCTTGGTGAAGCAGGGAAGGCGTCTTCAGAACAGTCTTCTGCCTCTGTGAAGTCCGCATTTTCAAGTATGCGTTGGATTGTGACCATT LITVPLLMVEFYIILRAVGAASSMIFWKLMIGTLVMLAGGYAGEAGYLPVWPAFIIGMAGWAFILYEIFLGEAGKASSEQSSASVKSAFSSMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTTCCACTTCTTATGGTCGAGTTTTACATAATTCTGCGTGCA---------GTT---GGTGCAGCATCATCG---ATGATC------------------------------------TTCTGGAAG---TTGATGATTGGTACTTTGGTTATGTTGGCTGGCGGTTACGCTGGTGAA---------GCA------------------GGA------TAT---------------------------------CTG------------------------------------------------------------------CCAGTT------------------TGGCCAGCA---TTCATTATCGGAATGGCGGGTTGGGCGTTCATTCTGTATGAAATC---------------TTT------CTT---GGTGAAGCAGGGAAGGCGTCTTCAGAA------CAG---TCTTCTGCCTCTGTG---AAG---TCC---GCA---TTT---TCA---AGTATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYIILRA---V-GAASS-MI------------FWK-LMIGTLVMLAGGYAGE---A------G--Y-----------L----------------------PV------WPA-FIIGMAGWAFILYEI-----F--L-GEAGKASSE--Q-SSASV-K-S-A-F-S-SM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-env9]_KJ929558 [III-env9] PRGD_OTU153_otuREP_99b4b7d9f6ad52ed0084f46cdfaf289d gb|KJ929558| PRGD_OTU153_otuREP_99b4b7d9f6ad52ed0084f46cdfaf289d, putative proteorhodopsin gene, partial cds. PRGD_OTU153_otuREP_99b4b7d9f6ad52ed0084f46cdfaf289d, putative proteorhodopsin gene, partial cds. KJ929558 [[proteorhodopsin super-cluster III/env cluster 9]] proteorhodopsin super-cluster III env cluster 9 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12) TTAATTACTGTTCCACTTCTCATGGTAGAGTTCTACATAATTCTCCGTGCAGTTGGTGCAGCATCAGGAATGATCTTCTGGAAGTTGATGATTGGCACTTTGGTTATGTTGGCTGGCGGTTACGCTGGTGAAGCTGGATATCTTGCAGTTTGGCCAGCATTTATTATCGGAATGGCAGGTTGGGCGTTCATTCTTTATGAAATCTTTCTTGGTGAAGCAGGGAAGGCGTCTGCAGAACAATCTTCTGTCGCTGTGAAGTCCGCATTTTCAACTATGCGTTGGATTGTGACCATT LITVPLLMVEFYIILRAVGAASGMIFWKLMIGTLVMLAGGYAGEAGYLAVWPAFIIGMAGWAFILYEIFLGEAGKASAEQSSVAVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTTCCACTTCTCATGGTAGAGTTCTACATAATTCTCCGTGCA---------GTT---GGTGCAGCATCAGGA---ATGATC------------------------------------TTCTGGAAG---TTGATGATTGGCACTTTGGTTATGTTGGCTGGCGGTTACGCTGGTGAA---------GCT------------------GGA------TAT---------------------------------CTT------------------------------------------------------------------GCAGTT------------------TGGCCAGCA---TTTATTATCGGAATGGCAGGTTGGGCGTTCATTCTTTATGAAATC---------------TTT------CTT---GGTGAAGCAGGGAAGGCGTCTGCAGAA------CAA---TCTTCTGTCGCTGTG---AAG---TCC---GCA---TTT---TCA---ACTATG---CGTTGGATTGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYIILRA---V-GAASG-MI------------FWK-LMIGTLVMLAGGYAGE---A------G--Y-----------L----------------------AV------WPA-FIIGMAGWAFILYEI-----F--L-GEAGKASAE--Q-SSVAV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-env9]_KJ929561 [III-env9] PRGD_OTU153_e0dd6ce41eb4b64449a18df5d3d9a6b3 gb|KJ929561| PRGD_OTU153_e0dd6ce41eb4b64449a18df5d3d9a6b3, putative proteorhodopsin gene, partial cds. PRGD_OTU153_e0dd6ce41eb4b64449a18df5d3d9a6b3, putative proteorhodopsin gene, partial cds. KJ929561 [[proteorhodopsin super-cluster III/env cluster 9]] proteorhodopsin super-cluster III env cluster 9 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACTGTTCCGCTTCTAATGGTTGAATTCTACATAATTCTTCGTGCAGTAGGTGCGGCATCCTCGATGATCTTCTGGAAGTTGATGATTGGTACTCTGGTTATGTTGGCTGGCGGTTATGCTGGTGAAGCCGGATATCTTGCAGTTTGGCCAGCATTCATCATCGGAATGGCTGGTTGGGCGTACATTCTGTATGAAATTTTTCTTGGTGAAGCAGGGAAGGCGTCTGCAGAACAATCTTCTGCCGCTGTGAAGTCAGCATTTTCAACCATGCGTTGGATTGTAACTATT LITVPLLMVEFYIILRAVGAASSMIFWKLMIGTLVMLAGGYAGEAGYLAVWPAFIIGMAGWAYILYEIFLGEAGKASAEQSSAAVKSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTTCCGCTTCTAATGGTTGAATTCTACATAATTCTTCGTGCA---------GTA---GGTGCGGCATCCTCG---ATGATC------------------------------------TTCTGGAAG---TTGATGATTGGTACTCTGGTTATGTTGGCTGGCGGTTATGCTGGTGAA---------GCC------------------GGA------TAT---------------------------------CTT------------------------------------------------------------------GCAGTT------------------TGGCCAGCA---TTCATCATCGGAATGGCTGGTTGGGCGTACATTCTGTATGAAATT---------------TTT------CTT---GGTGAAGCAGGGAAGGCGTCTGCAGAA------CAA---TCTTCTGCCGCTGTG---AAG---TCA---GCA---TTT---TCA---ACCATG---CGTTGGATTGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYIILRA---V-GAASS-MI------------FWK-LMIGTLVMLAGGYAGE---A------G--Y-----------L----------------------AV------WPA-FIIGMAGWAYILYEI-----F--L-GEAGKASAE--Q-SSAAV-K-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-env9]_KJ929559 [III-env9] PRGD_OTU153_2bfa00aabee58e1e52175fb1e0ee4a6a gb|KJ929559| PRGD_OTU153_2bfa00aabee58e1e52175fb1e0ee4a6a, putative proteorhodopsin gene, partial cds. PRGD_OTU153_2bfa00aabee58e1e52175fb1e0ee4a6a, putative proteorhodopsin gene, partial cds. KJ929559 [[proteorhodopsin super-cluster III/env cluster 9]] proteorhodopsin super-cluster III env cluster 9 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTAATTACTGTTCCACTTCTCATGGTTGAATTTTACATAATTCTACGTGCAGCTGGGGCAGCTTCAGCCAGCATCTTCTGGAAGTTGATGATTGGTACTTTGGTAATGTTGGGTGGCGGTTACGCTGGTGAAGCTGGATACATTGCAGTTTGGCCGGCTTTCATTATCGGAATGGCGGGCTGGCTTTACATTCTATATGAAATCTTTGCTGGTGAAGCAGGGAAGGCGTCTGCAGAACAATCGTCTGCAGCTGTGAGGTCCGCATTTTCAACAATGCGTTGGATTGTAACTATT LITVPLLMVEFYIILRAAGAASASIFWKLMIGTLVMLGGGYAGEAGYIAVWPAFIIGMAGWLYILYEIFAGEAGKASAEQSSAAVRSAFSTMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTTCCACTTCTCATGGTTGAATTTTACATAATTCTACGTGCA---------GCT---GGGGCAGCTTCAGCC---AGCATC------------------------------------TTCTGGAAG---TTGATGATTGGTACTTTGGTAATGTTGGGTGGCGGTTACGCTGGTGAA---------GCT------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------GCAGTT------------------TGGCCGGCT---TTCATTATCGGAATGGCGGGCTGGCTTTACATTCTATATGAAATC---------------TTT------GCT---GGTGAAGCAGGGAAGGCGTCTGCAGAA------CAA---TCGTCTGCAGCTGTG---AGG---TCC---GCA---TTT---TCA---ACAATG---CGTTGGATTGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYIILRA---A-GAASA-SI------------FWK-LMIGTLVMLGGGYAGE---A------G--Y-----------I----------------------AV------WPA-FIIGMAGWLYILYEI-----F--A-GEAGKASAE--Q-SSAAV-R-S-A-F-S-TM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [III-env9]_KJ929711 [III-env9] PRGD_OTU207_20682a086bb2bdf37dc228c09e39d8c7 gb|KJ929711| PRGD_OTU207_20682a086bb2bdf37dc228c09e39d8c7, putative proteorhodopsin gene, partial cds. PRGD_OTU207_20682a086bb2bdf37dc228c09e39d8c7, putative proteorhodopsin gene, partial cds. KJ929711 [[proteorhodopsin super-cluster III/env cluster 9]] proteorhodopsin super-cluster III env cluster 9 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATTACTGTTCCACTTCTTATGATCGAGTTCTACATTATCCTTCGTGCTGTAGGTGCAGCATCCTCAGGTATATTTTGGCGCTTGCTAATTGGTTCCGTTGTTATGTTAGTTGGTGGTTACGCCGGCGAAGCTGGCTACATTGACGTATGGCCAGCATTTATTATTGGAATGGCTGGTTGGGCGTTTATTTTATATGAAATATTCCTTGGTGAAGCTGGAAGGATGTCTGCAGAACAAGCTTCTGCCTCTGTGAAATCAGCCTTCTCAACAATGCGTTTGATTGTGATTATT LITVPLLMIEFYIILRAVGAASSGIFWRLLIGSVVMLVGGYAGEAGYIDVWPAFIIGMAGWAFILYEIFLGEAGRMSAEQASASVKSAFSTMRLIVII ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTTCCACTTCTTATGATCGAGTTCTACATTATCCTTCGTGCT---------GTA---GGTGCAGCATCCTCA---GGTATA------------------------------------TTTTGGCGC---TTGCTAATTGGTTCCGTTGTTATGTTAGTTGGTGGTTACGCCGGCGAA---------GCT------------------GGC------TAC---------------------------------ATT------------------------------------------------------------------GACGTA------------------TGGCCAGCA---TTTATTATTGGAATGGCTGGTTGGGCGTTTATTTTATATGAAATA---------------TTC------CTT---GGTGAAGCTGGAAGGATGTCTGCAGAA------CAA---GCTTCTGCCTCTGTG---AAA---TCA---GCC---TTC---TCA---ACAATG---CGTTTGATTGTGATTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYIILRA---V-GAASS-GI------------FWR-LLIGSVVMLVGGYAGE---A------G--Y-----------I----------------------DV------WPA-FIIGMAGWAFILYEI-----F--L-GEAGRMSAE--Q-ASASV-K-S-A-F-S-TM-RLIVII-------------------------------------------------------------------------------------------------------------------------------- [III-env9]_KJ929710 [III-env9] PRGD_OTU207_otuREP_8d693d117828f5e3ade422776ef1e5f5 gb|KJ929710| PRGD_OTU207_otuREP_8d693d117828f5e3ade422776ef1e5f5, putative proteorhodopsin gene, partial cds. PRGD_OTU207_otuREP_8d693d117828f5e3ade422776ef1e5f5, putative proteorhodopsin gene, partial cds. KJ929710 [[proteorhodopsin super-cluster III/env cluster 9]] proteorhodopsin super-cluster III env cluster 9 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683) TTGATTACTGTTCCACTTCTTATGATTGAATTCTACATCATCCTTCGAGCAGTTGGTGCAGCATCAGCTGGAATTTTCTGGCGTTTACTGATTGGCTCTGTAGTTATGTTGGCTGGTGGTTACGCGGGAGAAGCTGGCTATCTTGATGTTTGGCCCGCATTTATTATTGGGATGGCAGGTTGGGCATTTATTTTATATGAGATCTTCCTTGGTGAAGCAGGAAAGATGTCTGCAGATCGAGCCCCTGCATCTGTGAAGTCAGCATTTTCAACGATGCGTTTGATAGTAATTATT LITVPLLMIEFYIILRAVGAASAGIFWRLLIGSVVMLAGGYAGEAGYLDVWPAFIIGMAGWAFILYEIFLGEAGKMSADRAPASVKSAFSTMRLIVII ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTTCCACTTCTTATGATTGAATTCTACATCATCCTTCGAGCA---------GTT---GGTGCAGCATCAGCT---GGAATT------------------------------------TTCTGGCGT---TTACTGATTGGCTCTGTAGTTATGTTGGCTGGTGGTTACGCGGGAGAA---------GCT------------------GGC------TAT---------------------------------CTT------------------------------------------------------------------GATGTT------------------TGGCCCGCA---TTTATTATTGGGATGGCAGGTTGGGCATTTATTTTATATGAGATC---------------TTC------CTT---GGTGAAGCAGGAAAGATGTCTGCAGAT------CGA---GCCCCTGCATCTGTG---AAG---TCA---GCA---TTT---TCA---ACGATG---CGTTTGATAGTAATTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYIILRA---V-GAASA-GI------------FWR-LLIGSVVMLAGGYAGE---A------G--Y-----------L----------------------DV------WPA-FIIGMAGWAFILYEI-----F--L-GEAGKMSAD--R-APASV-K-S-A-F-S-TM-RLIVII-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928645 [unk-env8] PRGD_OTU045_6976e5e0196b17c987a9f556d04ca74f gb|KJ928645| PRGD_OTU045_6976e5e0196b17c987a9f556d04ca74f, putative proteorhodopsin gene, partial cds. PRGD_OTU045_6976e5e0196b17c987a9f556d04ca74f, putative proteorhodopsin gene, partial cds. KJ928645 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATCACCGTCCCACTGCAGGTTGCTGAGTTCTACCTCATACTCGCAGCTGTCGGGGCCGCCACCGCAATGCTGTTCTGGCGCCTCTTCGGCGCTTCCCTTGTGATGCTCATCTCCGGTTTCCTCGGCGAGTCGGGCCAAGGTCCAGAGATGCCCATGCTCATCATTGGATGTCTTGCTTGGTTCTACATCATCTACGAGATCTGGGCTGGTGACGCCAAGAAGAGCGCCGACACAACCTCGGAAGGTACAAAATTTGCCTTCAAGGCTATGGCCCTTATCCTCACCGTG LITVPLQVAEFYLILAAVGAATAMLFWRLFGASLVMLISGFLGESGQGPEMPMLIIGCLAWFYIIYEIWAGDAKKSADTTSEGTKFAFKAMALILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACCGTCCCACTGCAGGTTGCTGAGTTCTACCTCATACTCGCAGCT---------GTC---GGGGCCGCCACCGCA---ATGCTG------------------------------------TTCTGGCGC---CTCTTCGGCGCTTCCCTTGTGATGCTCATCTCCGGTTTCCTCGGCGAG---------TCG------------------GGC------------------------------------------------------------------------------CAA---------------------------GGTCCAGAG------------------ATGCCCATG---CTCATCATTGGATGTCTTGCTTGGTTCTACATCATCTACGAGATC---------------TGG------GCT---GGTGACGCCAAGAAG---AGCGCCGAC------ACA---ACCTCGGAAGGTACA---AAA---TTT---GCC---TTC---AAG---GCTATG---GCCCTTATCCTCACCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVAEFYLILAA---V-GAATA-ML------------FWR-LFGASLVMLISGFLGE---S------G--------------------------Q---------GPE------MPM-LIIGCLAWFYIIYEI-----W--A-GDAKK-SAD--T-TSEGT-K-F-A-F-K-AM-ALILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928650 [unk-env8] PRGD_OTU045_951f1d904e01659808742ca34f3a99c1 gb|KJ928650| PRGD_OTU045_951f1d904e01659808742ca34f3a99c1, putative proteorhodopsin gene, partial cds. PRGD_OTU045_951f1d904e01659808742ca34f3a99c1, putative proteorhodopsin gene, partial cds. KJ928650 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTGATCACCGTCCCACTGCAGGTTGCTGAGTTCTACCTCATACTCGCAGCCGTCGGGGCCGCCACCGCAATGCTGTTCTGGCGCCTCTTCGGCGCTTCCCTTGTGATGCTCATCTCCGGTTTCCTCGGCGAGTCGGGCCAAGGTCCAGAGATGCCCATGCTCATCATTGGATGTCTTGCTTGGTTCTACATCATCTACGAGATCTGGGCTGGTGACGCCAAGAAGAGCGCCGACACAACCTCGGAAGGTACAAAATTTGCCTTCAAGGCTATGGCCCTTATCCTCACCGTG LITVPLQVAEFYLILAAVGAATAMLFWRLFGASLVMLISGFLGESGQGPEMPMLIIGCLAWFYIIYEIWAGDAKKSADTTSEGTKFAFKAMALILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTCCCACTGCAGGTTGCTGAGTTCTACCTCATACTCGCAGCC---------GTC---GGGGCCGCCACCGCA---ATGCTG------------------------------------TTCTGGCGC---CTCTTCGGCGCTTCCCTTGTGATGCTCATCTCCGGTTTCCTCGGCGAG---------TCG------------------GGC------------------------------------------------------------------------------CAA---------------------------GGTCCAGAG------------------ATGCCCATG---CTCATCATTGGATGTCTTGCTTGGTTCTACATCATCTACGAGATC---------------TGG------GCT---GGTGACGCCAAGAAG---AGCGCCGAC------ACA---ACCTCGGAAGGTACA---AAA---TTT---GCC---TTC---AAG---GCTATG---GCCCTTATCCTCACCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVAEFYLILAA---V-GAATA-ML------------FWR-LFGASLVMLISGFLGE---S------G--------------------------Q---------GPE------MPM-LIIGCLAWFYIIYEI-----W--A-GDAKK-SAD--T-TSEGT-K-F-A-F-K-AM-ALILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928643 [unk-env8] PRGD_OTU045_4d286c8d8b2583a3f12f42882a6c9bcf gb|KJ928643| PRGD_OTU045_4d286c8d8b2583a3f12f42882a6c9bcf, putative proteorhodopsin gene, partial cds. PRGD_OTU045_4d286c8d8b2583a3f12f42882a6c9bcf, putative proteorhodopsin gene, partial cds. KJ928643 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTGATCACCGTCCCACTGCAGGTTGCTGAGTTCTACCTCATACTCGCAGCCGTCGGGGCCGCCACCGCAATGCTGTTCTGGCGCCTCTTCGGCGCTTCCCTTGTGATGCTCATCTCCGGTTTCCTCGGCGAGTCGGGCCAAGGTCCAGAGATACCCATGCTCGTCATTGGATGTATTGCTTGGTTCTACATCATCTACGAGATCTGGGCTGGTGACGCCAAGAAGAGCGCCGACACAACCTCGGAAGGTACAAAATTTGCCTTCAAGGCTATGGCCCTTATCCTCACCGTG LITVPLQVAEFYLILAAVGAATAMLFWRLFGASLVMLISGFLGESGQGPEIPMLVIGCIAWFYIIYEIWAGDAKKSADTTSEGTKFAFKAMALILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTCCCACTGCAGGTTGCTGAGTTCTACCTCATACTCGCAGCC---------GTC---GGGGCCGCCACCGCA---ATGCTG------------------------------------TTCTGGCGC---CTCTTCGGCGCTTCCCTTGTGATGCTCATCTCCGGTTTCCTCGGCGAG---------TCG------------------GGC------------------------------------------------------------------------------CAA---------------------------GGTCCAGAG------------------ATACCCATG---CTCGTCATTGGATGTATTGCTTGGTTCTACATCATCTACGAGATC---------------TGG------GCT---GGTGACGCCAAGAAG---AGCGCCGAC------ACA---ACCTCGGAAGGTACA---AAA---TTT---GCC---TTC---AAG---GCTATG---GCCCTTATCCTCACCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVAEFYLILAA---V-GAATA-ML------------FWR-LFGASLVMLISGFLGE---S------G--------------------------Q---------GPE------IPM-LVIGCIAWFYIIYEI-----W--A-GDAKK-SAD--T-TSEGT-K-F-A-F-K-AM-ALILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928658 [unk-env8] PRGD_OTU045_f85b6df733cfb765c234e863fc8f5e56 gb|KJ928658| PRGD_OTU045_f85b6df733cfb765c234e863fc8f5e56, putative proteorhodopsin gene, partial cds. PRGD_OTU045_f85b6df733cfb765c234e863fc8f5e56, putative proteorhodopsin gene, partial cds. KJ928658 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -33.28, 45.35) CTAATCACCGTCCCACTGCAGGTTGCTGAGTTCTACCTAATACTCGCAGCTGTCGGTGCCGCCACAGCAATGCTGTTTTGGCGCCTCTTCGGCGCTTCCCTCGTGATGCTCATCGCCGGTTTCCTCGGCGAGTCGGGCCAAGGTCCAGAGATGCCCATGTTCATCATTGGGGTTCTCGCCTGGTTCTACATCATCTACGAGATCTGGGCTGGCGACGCCAAGAAAAGCGCTGACACAACTTCGGAGGGCACAAAGTTCGCCTTCAGGGCTATGGCACTCATCCTCACCGTG LITVPLQVAEFYLILAAVGAATAMLFWRLFGASLVMLIAGFLGESGQGPEMPMFIIGVLAWFYIIYEIWAGDAKKSADTTSEGTKFAFRAMALILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACCGTCCCACTGCAGGTTGCTGAGTTCTACCTAATACTCGCAGCT---------GTC---GGTGCCGCCACAGCA---ATGCTG------------------------------------TTTTGGCGC---CTCTTCGGCGCTTCCCTCGTGATGCTCATCGCCGGTTTCCTCGGCGAG---------TCG------------------GGC------------------------------------------------------------------------------CAA---------------------------GGTCCAGAG------------------ATGCCCATG---TTCATCATTGGGGTTCTCGCCTGGTTCTACATCATCTACGAGATC---------------TGG------GCT---GGCGACGCCAAGAAA---AGCGCTGAC------ACA---ACTTCGGAGGGCACA---AAG---TTC---GCC---TTC---AGG---GCTATG---GCACTCATCCTCACCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVAEFYLILAA---V-GAATA-ML------------FWR-LFGASLVMLIAGFLGE---S------G--------------------------Q---------GPE------MPM-FIIGVLAWFYIIYEI-----W--A-GDAKK-SAD--T-TSEGT-K-F-A-F-R-AM-ALILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928648 [unk-env8] PRGD_OTU045_91d1232879ffefd16aef668144c5d7b0 gb|KJ928648| PRGD_OTU045_91d1232879ffefd16aef668144c5d7b0, putative proteorhodopsin gene, partial cds. PRGD_OTU045_91d1232879ffefd16aef668144c5d7b0, putative proteorhodopsin gene, partial cds. KJ928648 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (33.762, 29.175), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTGATCACCGTCCCACTGCAGGTTGCTGAGTTCTACCTCATCCTCGCAGCCGTCGGAGCCGCCACCGCCATGCTGTTCTGGCGCCTCTTCGGCGCTTCCCTCGTGATGCTCATCGCCGGTTTCCTCGGCGAGTCGGGCCAAGCCCCAGAGATGCCAATGCTCATCATTGGCTGCCTCGCTTGGTTCTACATCATCTACGAGGTTTGGGCTGGCGACGCCAAGAAAGGCGCCGACACCACCTCCGAAGGCACCCAGTTTGCCTTCAAGGCCATGGCCATCATCCTCACCGTG LITVPLQVAEFYLILAAVGAATAMLFWRLFGASLVMLIAGFLGESGQAPEMPMLIIGCLAWFYIIYEVWAGDAKKGADTTSEGTQFAFKAMAIILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTCCCACTGCAGGTTGCTGAGTTCTACCTCATCCTCGCAGCC---------GTC---GGAGCCGCCACCGCC---ATGCTG------------------------------------TTCTGGCGC---CTCTTCGGCGCTTCCCTCGTGATGCTCATCGCCGGTTTCCTCGGCGAG---------TCG------------------GGC------------------------------------------------------------------------------CAA---------------------------GCCCCAGAG------------------ATGCCAATG---CTCATCATTGGCTGCCTCGCTTGGTTCTACATCATCTACGAGGTT---------------TGG------GCT---GGCGACGCCAAGAAA---GGCGCCGAC------ACC---ACCTCCGAAGGCACC---CAG---TTT---GCC---TTC---AAG---GCCATG---GCCATCATCCTCACCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVAEFYLILAA---V-GAATA-ML------------FWR-LFGASLVMLIAGFLGE---S------G--------------------------Q---------APE------MPM-LIIGCLAWFYIIYEV-----W--A-GDAKK-GAD--T-TSEGT-Q-F-A-F-K-AM-AIILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928651 [unk-env8] PRGD_OTU045_a19078c3a525ae5ef0c6560c2f85346b gb|KJ928651| PRGD_OTU045_a19078c3a525ae5ef0c6560c2f85346b, putative proteorhodopsin gene, partial cds. PRGD_OTU045_a19078c3a525ae5ef0c6560c2f85346b, putative proteorhodopsin gene, partial cds. KJ928651 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATCACCGTCCCACTGCAGGTTGCTGAGTTCTACCTCATCCTCGCAGCCGTCGGAGCCGCTACCGCTGTGCTGTTCTGGCGCCTCTTCGGCGCTTCCCTCGTGATGCTCATCGCCGGTTTCCTCGGCGAGTCGGGCCAAGCCCCAGAAATGCCAATGCTCATCGTTGGCTGCCTCGCCTGGTTCTACATCATCTACGAGGTTTGGGCTGGCGACGCCAAGAAAGGCGCCGACACCACCTCCGAAGGCACCCAGTTTGCCTTCAAGGCCATGGCCATCATCCTCACCGTG LITVPLQVAEFYLILAAVGAATAVLFWRLFGASLVMLIAGFLGESGQAPEMPMLIVGCLAWFYIIYEVWAGDAKKGADTTSEGTQFAFKAMAIILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTCCCACTGCAGGTTGCTGAGTTCTACCTCATCCTCGCAGCC---------GTC---GGAGCCGCTACCGCT---GTGCTG------------------------------------TTCTGGCGC---CTCTTCGGCGCTTCCCTCGTGATGCTCATCGCCGGTTTCCTCGGCGAG---------TCG------------------GGC------------------------------------------------------------------------------CAA---------------------------GCCCCAGAA------------------ATGCCAATG---CTCATCGTTGGCTGCCTCGCCTGGTTCTACATCATCTACGAGGTT---------------TGG------GCT---GGCGACGCCAAGAAA---GGCGCCGAC------ACC---ACCTCCGAAGGCACC---CAG---TTT---GCC---TTC---AAG---GCCATG---GCCATCATCCTCACCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVAEFYLILAA---V-GAATA-VL------------FWR-LFGASLVMLIAGFLGE---S------G--------------------------Q---------APE------MPM-LIVGCLAWFYIIYEV-----W--A-GDAKK-GAD--T-TSEGT-Q-F-A-F-K-AM-AIILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928655 [unk-env8] PRGD_OTU045_da243b668b2be00d4fe023a531f6e107 gb|KJ928655| PRGD_OTU045_da243b668b2be00d4fe023a531f6e107, putative proteorhodopsin gene, partial cds. PRGD_OTU045_da243b668b2be00d4fe023a531f6e107, putative proteorhodopsin gene, partial cds. KJ928655 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTGATCACCGTCCCACTGCAGGTTGCTGAATTCTACCTCATCCTCGCAGCTGTCGGAGCCGCCACCGCCATGCTGTTCTGGCGCCTCTTCGGTGCTTCCCTCGTGATGCTCATCGCCGGTTTCCTCGGCGAGTCGGGTCAAGCTCCAGAGATGCCAATGCTCGCCATTGGTGTCGCTGCTTGGCTATACATCATCTACGAGGTTTGGGCTGGCGACGCCAAGAAAGGCGCTGACACCACCTCCGAGGGCACCCAGTTTGCCTTCAAGGCCATGGCCATCATCCTCACCGTG LITVPLQVAEFYLILAAVGAATAMLFWRLFGASLVMLIAGFLGESGQAPEMPMLAIGVAAWLYIIYEVWAGDAKKGADTTSEGTQFAFKAMAIILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTCCCACTGCAGGTTGCTGAATTCTACCTCATCCTCGCAGCT---------GTC---GGAGCCGCCACCGCC---ATGCTG------------------------------------TTCTGGCGC---CTCTTCGGTGCTTCCCTCGTGATGCTCATCGCCGGTTTCCTCGGCGAG---------TCG------------------GGT------------------------------------------------------------------------------CAA---------------------------GCTCCAGAG------------------ATGCCAATG---CTCGCCATTGGTGTCGCTGCTTGGCTATACATCATCTACGAGGTT---------------TGG------GCT---GGCGACGCCAAGAAA---GGCGCTGAC------ACC---ACCTCCGAGGGCACC---CAG---TTT---GCC---TTC---AAG---GCCATG---GCCATCATCCTCACCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVAEFYLILAA---V-GAATA-ML------------FWR-LFGASLVMLIAGFLGE---S------G--------------------------Q---------APE------MPM-LAIGVAAWLYIIYEV-----W--A-GDAKK-GAD--T-TSEGT-Q-F-A-F-K-AM-AIILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928659 [unk-env8] PRGD_OTU045_fb5248c9787f86e831ae2f3b07df8e9d gb|KJ928659| PRGD_OTU045_fb5248c9787f86e831ae2f3b07df8e9d, putative proteorhodopsin gene, partial cds. PRGD_OTU045_fb5248c9787f86e831ae2f3b07df8e9d, putative proteorhodopsin gene, partial cds. KJ928659 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACCGTCCCACTGCAGGTTGCTGAGTTCTACCTCATCCTCGCAGCTGTCGGAGCCGCCACCGCCATGCTGTTCTGGCGCCTCTTCGGCGCTTCCCTCGTGATGCTCATCGCCGGTTTCCTCGGCGAGTCGGGCCAAGCTCCAGAGATGCCAATGCTCGCCATTGGTGTCGCTGCTTGGGCATACATCATCTACGAGGTTTGGGCTGGCGACGCCAAGAAAGGCGCTGACACCACCTCCGAGGGCACCCAGTTTGCCTTCAAGGCCATGGCCATCATCCTCACCGTG LITVPLQVAEFYLILAAVGAATAMLFWRLFGASLVMLIAGFLGESGQAPEMPMLAIGVAAWAYIIYEVWAGDAKKGADTTSEGTQFAFKAMAIILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTCCCACTGCAGGTTGCTGAGTTCTACCTCATCCTCGCAGCT---------GTC---GGAGCCGCCACCGCC---ATGCTG------------------------------------TTCTGGCGC---CTCTTCGGCGCTTCCCTCGTGATGCTCATCGCCGGTTTCCTCGGCGAG---------TCG------------------GGC------------------------------------------------------------------------------CAA---------------------------GCTCCAGAG------------------ATGCCAATG---CTCGCCATTGGTGTCGCTGCTTGGGCATACATCATCTACGAGGTT---------------TGG------GCT---GGCGACGCCAAGAAA---GGCGCTGAC------ACC---ACCTCCGAGGGCACC---CAG---TTT---GCC---TTC---AAG---GCCATG---GCCATCATCCTCACCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVAEFYLILAA---V-GAATA-ML------------FWR-LFGASLVMLIAGFLGE---S------G--------------------------Q---------APE------MPM-LAIGVAAWAYIIYEV-----W--A-GDAKK-GAD--T-TSEGT-Q-F-A-F-K-AM-AIILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928646 [unk-env8] PRGD_OTU045_78d0e9a073450a06f89cd37d4e3f83b7 gb|KJ928646| PRGD_OTU045_78d0e9a073450a06f89cd37d4e3f83b7, putative proteorhodopsin gene, partial cds. PRGD_OTU045_78d0e9a073450a06f89cd37d4e3f83b7, putative proteorhodopsin gene, partial cds. KJ928646 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACCGTTCCACTGCAGGTTGCTGAGTTCTACCTCATCCTCGCAGCCGTCGGAGCCGCTACCGCCATGCTGTTCTGGCGCCTCTTCGGCGCTTCCCTCGTGATGCTCATCGCCGGTTTCCTCGGCGAGTCGGGCCAAGCTCCAGAGATGCCAATGCTCGCCATTGGTGTCGCTGCTTGGGCATACATCATCTACGAGGTTTGGGCTGGCGACGCCAAGAAAGGCGCCGACACCACCTCCGAGGGCACCCAGTTTGCCTTCAAGGCCATGGCCATCATCCTCACCGTG LITVPLQVAEFYLILAAVGAATAMLFWRLFGASLVMLIAGFLGESGQAPEMPMLAIGVAAWAYIIYEVWAGDAKKGADTTSEGTQFAFKAMAIILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTTCCACTGCAGGTTGCTGAGTTCTACCTCATCCTCGCAGCC---------GTC---GGAGCCGCTACCGCC---ATGCTG------------------------------------TTCTGGCGC---CTCTTCGGCGCTTCCCTCGTGATGCTCATCGCCGGTTTCCTCGGCGAG---------TCG------------------GGC------------------------------------------------------------------------------CAA---------------------------GCTCCAGAG------------------ATGCCAATG---CTCGCCATTGGTGTCGCTGCTTGGGCATACATCATCTACGAGGTT---------------TGG------GCT---GGCGACGCCAAGAAA---GGCGCCGAC------ACC---ACCTCCGAGGGCACC---CAG---TTT---GCC---TTC---AAG---GCCATG---GCCATCATCCTCACCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVAEFYLILAA---V-GAATA-ML------------FWR-LFGASLVMLIAGFLGE---S------G--------------------------Q---------APE------MPM-LAIGVAAWAYIIYEV-----W--A-GDAKK-GAD--T-TSEGT-Q-F-A-F-K-AM-AIILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928639 [unk-env8] PRGD_OTU045_0d4e126bc8116aa5a9e2a7529df87390 gb|KJ928639| PRGD_OTU045_0d4e126bc8116aa5a9e2a7529df87390, putative proteorhodopsin gene, partial cds. PRGD_OTU045_0d4e126bc8116aa5a9e2a7529df87390, putative proteorhodopsin gene, partial cds. KJ928639 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATCACCGTTCCACTGCAGGTTGCTGAGTTCTACCTCATCCTCGCTGCTGTTGGTGCCGCTACCGCCATGCTCTTCTGGCGCCTCTTCGGTGCTTCGTTGGTCATGCTCATCGCCGGTTTCCTCGGCGAGTCGGGCCAAGCTCCAGAGATGCCAATGCTCGCCATTGGTGTCGCTGCTTGGGCATACATCATCTACGAAGTTTGGGCTGGCGACGCCAAGAAAGGCGCCGACACCACCTCCGAGGGCACACAATTTGCCTTCAAGGCCATGGCCATCATCCTCACCGTG LITVPLQVAEFYLILAAVGAATAMLFWRLFGASLVMLIAGFLGESGQAPEMPMLAIGVAAWAYIIYEVWAGDAKKGADTTSEGTQFAFKAMAIILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTTCCACTGCAGGTTGCTGAGTTCTACCTCATCCTCGCTGCT---------GTT---GGTGCCGCTACCGCC---ATGCTC------------------------------------TTCTGGCGC---CTCTTCGGTGCTTCGTTGGTCATGCTCATCGCCGGTTTCCTCGGCGAG---------TCG------------------GGC------------------------------------------------------------------------------CAA---------------------------GCTCCAGAG------------------ATGCCAATG---CTCGCCATTGGTGTCGCTGCTTGGGCATACATCATCTACGAAGTT---------------TGG------GCT---GGCGACGCCAAGAAA---GGCGCCGAC------ACC---ACCTCCGAGGGCACA---CAA---TTT---GCC---TTC---AAG---GCCATG---GCCATCATCCTCACCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVAEFYLILAA---V-GAATA-ML------------FWR-LFGASLVMLIAGFLGE---S------G--------------------------Q---------APE------MPM-LAIGVAAWAYIIYEV-----W--A-GDAKK-GAD--T-TSEGT-Q-F-A-F-K-AM-AIILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928642 [unk-env8] PRGD_OTU045_40d167a7f3cd3f413d7bced25d36981c gb|KJ928642| PRGD_OTU045_40d167a7f3cd3f413d7bced25d36981c, putative proteorhodopsin gene, partial cds. PRGD_OTU045_40d167a7f3cd3f413d7bced25d36981c, putative proteorhodopsin gene, partial cds. KJ928642 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATCACCGTCCCGTTGCAGGTTGCTGAGTTCTACCTCATCCTGGCTGCCGTTGGTGCCGCTACCGCCGTGCTCTTCTGGCGCCTCTTTGGTGCTTCGTTGGTCATGCTCATCGCAGGTTTCCTCGGTGAAGCTGGACACGCCCCAGAGATGCCAATGCTCGCCGTTGGTATCGCTGCTTGGGCATACATCATCTACGAAGTTTGGGCTGGCGACGCCAAGAAAGGCGCCGACACCACCTCCGAAGGCACACAATTTGCCTTCAAGGCCATGGCCATCATCCTCACCGTG LITVPLQVAEFYLILAAVGAATAVLFWRLFGASLVMLIAGFLGEAGHAPEMPMLAVGIAAWAYIIYEVWAGDAKKGADTTSEGTQFAFKAMAIILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTCCCGTTGCAGGTTGCTGAGTTCTACCTCATCCTGGCTGCC---------GTT---GGTGCCGCTACCGCC---GTGCTC------------------------------------TTCTGGCGC---CTCTTTGGTGCTTCGTTGGTCATGCTCATCGCAGGTTTCCTCGGTGAA---------GCT------------------GGA------------------------------------------------------------------------------CAC---------------------------GCCCCAGAG------------------ATGCCAATG---CTCGCCGTTGGTATCGCTGCTTGGGCATACATCATCTACGAAGTT---------------TGG------GCT---GGCGACGCCAAGAAA---GGCGCCGAC------ACC---ACCTCCGAAGGCACA---CAA---TTT---GCC---TTC---AAG---GCCATG---GCCATCATCCTCACCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVAEFYLILAA---V-GAATA-VL------------FWR-LFGASLVMLIAGFLGE---A------G--------------------------H---------APE------MPM-LAVGIAAWAYIIYEV-----W--A-GDAKK-GAD--T-TSEGT-Q-F-A-F-K-AM-AIILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928641 [unk-env8] PRGD_OTU045_3e31aa63ed1f2878355e90010d7fe419 gb|KJ928641| PRGD_OTU045_3e31aa63ed1f2878355e90010d7fe419, putative proteorhodopsin gene, partial cds. PRGD_OTU045_3e31aa63ed1f2878355e90010d7fe419, putative proteorhodopsin gene, partial cds. KJ928641 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACCGTCCCACTGCAGGTTGCTGAGTTCTACCTCATCCTCGCTGCTGTCGGTGCCGCCACCGCCATGCTCTTCTGGCGCCTCTTCGGTGCTTCCCTGGTCATGCTCATCTGTGGTTTCCTCGGTGAGGCTGAACTGGCCCCACAAATGCCAATGCTCGTCGTTGGTGTGGCTGCTTGGGGATACATCATCTACGAAGTGTGGGCTGGCGACGCCAAGAAAGGTGCCGAAACCACCTCCGAGGGTACCCAATTCGCCTTCAAGGCCATGGCCCTCATCCTCACCTTT LITVPLQVAEFYLILAAVGAATAMLFWRLFGASLVMLICGFLGEAELAPQMPMLVVGVAAWGYIIYEVWAGDAKKGAETTSEGTQFAFKAMALILTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTCCCACTGCAGGTTGCTGAGTTCTACCTCATCCTCGCTGCT---------GTC---GGTGCCGCCACCGCC---ATGCTC------------------------------------TTCTGGCGC---CTCTTCGGTGCTTCCCTGGTCATGCTCATCTGTGGTTTCCTCGGTGAG---------GCT------------------GAA------------------------------------------------------------------------------CTG---------------------------GCCCCACAA------------------ATGCCAATG---CTCGTCGTTGGTGTGGCTGCTTGGGGATACATCATCTACGAAGTG---------------TGG------GCT---GGCGACGCCAAGAAA---GGTGCCGAA------ACC---ACCTCCGAGGGTACC---CAA---TTC---GCC---TTC---AAG---GCCATG---GCCCTCATCCTCACCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVAEFYLILAA---V-GAATA-ML------------FWR-LFGASLVMLICGFLGE---A------E--------------------------L---------APQ------MPM-LVVGVAAWGYIIYEV-----W--A-GDAKK-GAE--T-TSEGT-Q-F-A-F-K-AM-ALILTF-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928638 [unk-env8] PRGD_OTU045_otuREP_8f8162888b4cac61d0503d4a6f34f4d7 gb|KJ928638| PRGD_OTU045_otuREP_8f8162888b4cac61d0503d4a6f34f4d7, putative proteorhodopsin gene, partial cds. PRGD_OTU045_otuREP_8f8162888b4cac61d0503d4a6f34f4d7, putative proteorhodopsin gene, partial cds. KJ928638 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), North Pacific Ocean (50.06, -139.53), English Channel (48.7717, -3.9683) TTGATCACCGTCCCACTGCAGGTTGCTGAGTTCTACCTCATCCTCGCTGCTGTCGGTGCCGCCACCGCCATGCTCTTCTGGCGCCTCTTCGGTGCTTCCCTGGTCATGCTCATCTGTGGTTTCCTCGGTGAGGCCGAACTGGCCCCACAAATACCAATGCTCATCGTTGGTGTGGCTGCTTGGGGTTACATCATCTACGAAGTGTGGGCCGGCGACGCCAAGAAAGGTGCCGACACCACCTCGGAAGGTACCCAGTTCGCTTTCAAGGCCATGGCCCTTATCCTCACCTTT LITVPLQVAEFYLILAAVGAATAMLFWRLFGASLVMLICGFLGEAELAPQIPMLIVGVAAWGYIIYEVWAGDAKKGADTTSEGTQFAFKAMALILTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTCCCACTGCAGGTTGCTGAGTTCTACCTCATCCTCGCTGCT---------GTC---GGTGCCGCCACCGCC---ATGCTC------------------------------------TTCTGGCGC---CTCTTCGGTGCTTCCCTGGTCATGCTCATCTGTGGTTTCCTCGGTGAG---------GCC------------------GAA------------------------------------------------------------------------------CTG---------------------------GCCCCACAA------------------ATACCAATG---CTCATCGTTGGTGTGGCTGCTTGGGGTTACATCATCTACGAAGTG---------------TGG------GCC---GGCGACGCCAAGAAA---GGTGCCGAC------ACC---ACCTCGGAAGGTACC---CAG---TTC---GCT---TTC---AAG---GCCATG---GCCCTTATCCTCACCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVAEFYLILAA---V-GAATA-ML------------FWR-LFGASLVMLICGFLGE---A------E--------------------------L---------APQ------IPM-LIVGVAAWGYIIYEV-----W--A-GDAKK-GAD--T-TSEGT-Q-F-A-F-K-AM-ALILTF-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928652 [unk-env8] PRGD_OTU045_b085f3d2b9ae0e9d2ec101b9d19a1692 gb|KJ928652| PRGD_OTU045_b085f3d2b9ae0e9d2ec101b9d19a1692, putative proteorhodopsin gene, partial cds. PRGD_OTU045_b085f3d2b9ae0e9d2ec101b9d19a1692, putative proteorhodopsin gene, partial cds. KJ928652 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637), Indian Ocean (-14.48, 113.45) TTGATCACCGTCCCACTGCAAGTTGCTGAGTTCTACCTCATCCTCGCCGCTGTCGGTGCCGCCACCGCCATGCTCTTCTGGCGCCTCTTCGGTGCTTCCCTGGTCATGCTCATCGCTGGTTTCCTCGGCGAGTCGGGCCAAGCCCCAGAATTGCCAATGCTCATCGTTGGTGTGGCTGCTTGGGGATACATCATCTACGAAGTGTGGGCCGGCGACGCCAAGAAAGGTGCCGACACCACCTCGGAAGGTACCCAGTTCGCTTTCAAGGCCATGGCCCTTATCCTCACCTTT LITVPLQVAEFYLILAAVGAATAMLFWRLFGASLVMLIAGFLGESGQAPELPMLIVGVAAWGYIIYEVWAGDAKKGADTTSEGTQFAFKAMALILTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTCCCACTGCAAGTTGCTGAGTTCTACCTCATCCTCGCCGCT---------GTC---GGTGCCGCCACCGCC---ATGCTC------------------------------------TTCTGGCGC---CTCTTCGGTGCTTCCCTGGTCATGCTCATCGCTGGTTTCCTCGGCGAG---------TCG------------------GGC------------------------------------------------------------------------------CAA---------------------------GCCCCAGAA------------------TTGCCAATG---CTCATCGTTGGTGTGGCTGCTTGGGGATACATCATCTACGAAGTG---------------TGG------GCC---GGCGACGCCAAGAAA---GGTGCCGAC------ACC---ACCTCGGAAGGTACC---CAG---TTC---GCT---TTC---AAG---GCCATG---GCCCTTATCCTCACCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVAEFYLILAA---V-GAATA-ML------------FWR-LFGASLVMLIAGFLGE---S------G--------------------------Q---------APE------LPM-LIVGVAAWGYIIYEV-----W--A-GDAKK-GAD--T-TSEGT-Q-F-A-F-K-AM-ALILTF-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928656 [unk-env8] PRGD_OTU045_dd75ed72e155b9cb9c36a2453467c78f gb|KJ928656| PRGD_OTU045_dd75ed72e155b9cb9c36a2453467c78f, putative proteorhodopsin gene, partial cds. PRGD_OTU045_dd75ed72e155b9cb9c36a2453467c78f, putative proteorhodopsin gene, partial cds. KJ928656 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACCGTCCCACTGCAAGTTGCTGAGTTCTACCTCATCCTCGCCGCTGTCGGTGCCGCCACCGCCATGCTCTTCTGGCGCCTCTTCGGTGCTTCCCTGGTCATGCTCATCGCTGGTTTCCTCGGCGAGTCGGGCCAAGCCCCAGAATTGCCAATGCTCGTCGTTGGTGTTGTTGCTTGGGGTTACATCATTTACGAAGTGTGGGCCGGCGACGCCAAGAAAGGTGCCGACACCACCTCGGAAGGTACCCAGTTCGCTTTCAAGGCCATGGCCCTTATCCTCACCTTT LITVPLQVAEFYLILAAVGAATAMLFWRLFGASLVMLIAGFLGESGQAPELPMLVVGVVAWGYIIYEVWAGDAKKGADTTSEGTQFAFKAMALILTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTCCCACTGCAAGTTGCTGAGTTCTACCTCATCCTCGCCGCT---------GTC---GGTGCCGCCACCGCC---ATGCTC------------------------------------TTCTGGCGC---CTCTTCGGTGCTTCCCTGGTCATGCTCATCGCTGGTTTCCTCGGCGAG---------TCG------------------GGC------------------------------------------------------------------------------CAA---------------------------GCCCCAGAA------------------TTGCCAATG---CTCGTCGTTGGTGTTGTTGCTTGGGGTTACATCATTTACGAAGTG---------------TGG------GCC---GGCGACGCCAAGAAA---GGTGCCGAC------ACC---ACCTCGGAAGGTACC---CAG---TTC---GCT---TTC---AAG---GCCATG---GCCCTTATCCTCACCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVAEFYLILAA---V-GAATA-ML------------FWR-LFGASLVMLIAGFLGE---S------G--------------------------Q---------APE------LPM-LVVGVVAWGYIIYEV-----W--A-GDAKK-GAD--T-TSEGT-Q-F-A-F-K-AM-ALILTF-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928653 [unk-env8] PRGD_OTU045_be16c92b73f959269a573f2a614046dc gb|KJ928653| PRGD_OTU045_be16c92b73f959269a573f2a614046dc, putative proteorhodopsin gene, partial cds. PRGD_OTU045_be16c92b73f959269a573f2a614046dc, putative proteorhodopsin gene, partial cds. KJ928653 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACCGTCCCACTGCAGGTTGCTGAGTTCTACCTCATCCTCGCTGCCGTCGGTGCCGCCACCGCCATGCTCTTCTGGCGCCTCTTCGGTGCTTCCCTGGTCATGCTCATCGCTGGTTTCCTCGGCGAGTCGGGCCAAGCCCCAGAATTGCCAATGCTCGTCGTTGGTGTTGTTGCTTGGGGTTACATCATTTACGAAGTGTGGGCCGGCGACGCCAAGAAAGGTGCCGACACCACCTCGGAAGGTACCCAGTTCGCTTTCAAGGCCATGGCCCTTATCCTCACCTTT LITVPLQVAEFYLILAAVGAATAMLFWRLFGASLVMLIAGFLGESGQAPELPMLVVGVVAWGYIIYEVWAGDAKKGADTTSEGTQFAFKAMALILTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTCCCACTGCAGGTTGCTGAGTTCTACCTCATCCTCGCTGCC---------GTC---GGTGCCGCCACCGCC---ATGCTC------------------------------------TTCTGGCGC---CTCTTCGGTGCTTCCCTGGTCATGCTCATCGCTGGTTTCCTCGGCGAG---------TCG------------------GGC------------------------------------------------------------------------------CAA---------------------------GCCCCAGAA------------------TTGCCAATG---CTCGTCGTTGGTGTTGTTGCTTGGGGTTACATCATTTACGAAGTG---------------TGG------GCC---GGCGACGCCAAGAAA---GGTGCCGAC------ACC---ACCTCGGAAGGTACC---CAG---TTC---GCT---TTC---AAG---GCCATG---GCCCTTATCCTCACCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVAEFYLILAA---V-GAATA-ML------------FWR-LFGASLVMLIAGFLGE---S------G--------------------------Q---------APE------LPM-LVVGVVAWGYIIYEV-----W--A-GDAKK-GAD--T-TSEGT-Q-F-A-F-K-AM-ALILTF-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928654 [unk-env8] PRGD_OTU045_d0cbd47af763c20af8a19636e4a50411 gb|KJ928654| PRGD_OTU045_d0cbd47af763c20af8a19636e4a50411, putative proteorhodopsin gene, partial cds. PRGD_OTU045_d0cbd47af763c20af8a19636e4a50411, putative proteorhodopsin gene, partial cds. KJ928654 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACCGTCCCACTGCAGGTTGCTGAGTTCTACCTCATCCTCGCAGCCGTCGGAGCCGCTACCGCCGTGCTCTTCTGGCGCCTCTTCGGTGCTTCTTTGGTCATGCTCATCGCTGGTTTCCTCGGCGAGTCGGGCCAAGCCCCAGAATTGCCAATGCTCGTCGTTGGTGTTGTTGCTTGGGGTTACATCATTTACGAAGTGTGGGCCGGCGACGCCAAGAAAGGTGCCGACACCACCTCGGAAGGTACCCAGTTCGCTTTCAAGGCCATGGCCCTTATCCTCACCTTT LITVPLQVAEFYLILAAVGAATAVLFWRLFGASLVMLIAGFLGESGQAPELPMLVVGVVAWGYIIYEVWAGDAKKGADTTSEGTQFAFKAMALILTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTCCCACTGCAGGTTGCTGAGTTCTACCTCATCCTCGCAGCC---------GTC---GGAGCCGCTACCGCC---GTGCTC------------------------------------TTCTGGCGC---CTCTTCGGTGCTTCTTTGGTCATGCTCATCGCTGGTTTCCTCGGCGAG---------TCG------------------GGC------------------------------------------------------------------------------CAA---------------------------GCCCCAGAA------------------TTGCCAATG---CTCGTCGTTGGTGTTGTTGCTTGGGGTTACATCATTTACGAAGTG---------------TGG------GCC---GGCGACGCCAAGAAA---GGTGCCGAC------ACC---ACCTCGGAAGGTACC---CAG---TTC---GCT---TTC---AAG---GCCATG---GCCCTTATCCTCACCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVAEFYLILAA---V-GAATA-VL------------FWR-LFGASLVMLIAGFLGE---S------G--------------------------Q---------APE------LPM-LVVGVVAWGYIIYEV-----W--A-GDAKK-GAD--T-TSEGT-Q-F-A-F-K-AM-ALILTF-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928647 [unk-env8] PRGD_OTU045_843bc6236d6e77b78e4558e860d1d796 gb|KJ928647| PRGD_OTU045_843bc6236d6e77b78e4558e860d1d796, putative proteorhodopsin gene, partial cds. PRGD_OTU045_843bc6236d6e77b78e4558e860d1d796, putative proteorhodopsin gene, partial cds. KJ928647 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683) TTGATCACCGTCCCACTGCAGGTTGCTGAGTTCTACCTCATCCTCGCAGCCGTCGGAGCCGCTACCGCCGTGCTCTTCTGGCGCCTCTTCGGTGCTTCCCTGGTCATGCTCATCGCTGGTTTCCTCGGCGAGTCGGGCCAAGCCCCAGAATTGCCAATGCTCGTCGTTGGTGTTGTTGCTTGGGGTTACATCATTTACGAAGTGTGGGCCGGCGACGCCAAGAAAGGTGCCGACACCACCTCGGAAGGTACCCAGTTTGCCTTCAAGGCCATGGCCCTTATCCTCACCTTT LITVPLQVAEFYLILAAVGAATAVLFWRLFGASLVMLIAGFLGESGQAPELPMLVVGVVAWGYIIYEVWAGDAKKGADTTSEGTQFAFKAMALILTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTCCCACTGCAGGTTGCTGAGTTCTACCTCATCCTCGCAGCC---------GTC---GGAGCCGCTACCGCC---GTGCTC------------------------------------TTCTGGCGC---CTCTTCGGTGCTTCCCTGGTCATGCTCATCGCTGGTTTCCTCGGCGAG---------TCG------------------GGC------------------------------------------------------------------------------CAA---------------------------GCCCCAGAA------------------TTGCCAATG---CTCGTCGTTGGTGTTGTTGCTTGGGGTTACATCATTTACGAAGTG---------------TGG------GCC---GGCGACGCCAAGAAA---GGTGCCGAC------ACC---ACCTCGGAAGGTACC---CAG---TTT---GCC---TTC---AAG---GCCATG---GCCCTTATCCTCACCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVAEFYLILAA---V-GAATA-VL------------FWR-LFGASLVMLIAGFLGE---S------G--------------------------Q---------APE------LPM-LVVGVVAWGYIIYEV-----W--A-GDAKK-GAD--T-TSEGT-Q-F-A-F-K-AM-ALILTF-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928644 [unk-env8] PRGD_OTU045_53abb7c22d124277e94a6e2eb799aed3 gb|KJ928644| PRGD_OTU045_53abb7c22d124277e94a6e2eb799aed3, putative proteorhodopsin gene, partial cds. PRGD_OTU045_53abb7c22d124277e94a6e2eb799aed3, putative proteorhodopsin gene, partial cds. KJ928644 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (73.9992, 19.2097) TTGATCACCGTCCCACTGCAGGTTGCTGAGTTCTACCTCATCCTCGCAGCCGTCGGAGCTGCCACCGCCGTGCTCTTCTGGCGCCTCTTCGGTGCTTCTTTGGTCATGCTCATCGCTGGTTTCCTCGGCGAGTCGGGCCAAGCCCCAGAATTGCCAATGCTCGTCGTTGGTGTTGTTGCTTGGGGTTACATCATCTACGAAGTGTGGGCCGGCGACGCCAAGAAAGGCGCCGAGACCACCTCGGAAGGTACCCAGTTTGCCTTCAAGGCCATGGCCCTTATCCTCACCTTT LITVPLQVAEFYLILAAVGAATAVLFWRLFGASLVMLIAGFLGESGQAPELPMLVVGVVAWGYIIYEVWAGDAKKGAETTSEGTQFAFKAMALILTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTCCCACTGCAGGTTGCTGAGTTCTACCTCATCCTCGCAGCC---------GTC---GGAGCTGCCACCGCC---GTGCTC------------------------------------TTCTGGCGC---CTCTTCGGTGCTTCTTTGGTCATGCTCATCGCTGGTTTCCTCGGCGAG---------TCG------------------GGC------------------------------------------------------------------------------CAA---------------------------GCCCCAGAA------------------TTGCCAATG---CTCGTCGTTGGTGTTGTTGCTTGGGGTTACATCATCTACGAAGTG---------------TGG------GCC---GGCGACGCCAAGAAA---GGCGCCGAG------ACC---ACCTCGGAAGGTACC---CAG---TTT---GCC---TTC---AAG---GCCATG---GCCCTTATCCTCACCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVAEFYLILAA---V-GAATA-VL------------FWR-LFGASLVMLIAGFLGE---S------G--------------------------Q---------APE------LPM-LVVGVVAWGYIIYEV-----W--A-GDAKK-GAE--T-TSEGT-Q-F-A-F-K-AM-ALILTF-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928640 [unk-env8] PRGD_OTU045_0f3173064f54579c334da6dca59a3aa9 gb|KJ928640| PRGD_OTU045_0f3173064f54579c334da6dca59a3aa9, putative proteorhodopsin gene, partial cds. PRGD_OTU045_0f3173064f54579c334da6dca59a3aa9, putative proteorhodopsin gene, partial cds. KJ928640 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-14.48, 113.45) TTGATCACCGTCCCACTGCAGGTGGCTGAGTTCTACCTCATCCTCGCTGCCGTCGGTGCCGCCACCGCCATGCTCTTCTGGCGCCTCTTCGGTGCTTCCTTGGTCATGCTCATCGCTGGTTTCCTCGGCGAGTCGGGCCAAGCCCCAGAAATGCCAATGCTCATTGTCGGCTGTGTCGCCTGGGCTTACATCATCTACGAAGTGTGGGCTGGCGACGCCAAGAAAGGCGCCGACACCACCTCCGAAGGAACCCAATTCGCCTTCAAGGCCATGGCCCTCATCCTCACCTTT LITVPLQVAEFYLILAAVGAATAMLFWRLFGASLVMLIAGFLGESGQAPEMPMLIVGCVAWAYIIYEVWAGDAKKGADTTSEGTQFAFKAMALILTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTCCCACTGCAGGTGGCTGAGTTCTACCTCATCCTCGCTGCC---------GTC---GGTGCCGCCACCGCC---ATGCTC------------------------------------TTCTGGCGC---CTCTTCGGTGCTTCCTTGGTCATGCTCATCGCTGGTTTCCTCGGCGAG---------TCG------------------GGC------------------------------------------------------------------------------CAA---------------------------GCCCCAGAA------------------ATGCCAATG---CTCATTGTCGGCTGTGTCGCCTGGGCTTACATCATCTACGAAGTG---------------TGG------GCT---GGCGACGCCAAGAAA---GGCGCCGAC------ACC---ACCTCCGAAGGAACC---CAA---TTC---GCC---TTC---AAG---GCCATG---GCCCTCATCCTCACCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVAEFYLILAA---V-GAATA-ML------------FWR-LFGASLVMLIAGFLGE---S------G--------------------------Q---------APE------MPM-LIVGCVAWAYIIYEV-----W--A-GDAKK-GAD--T-TSEGT-Q-F-A-F-K-AM-ALILTF-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ929727 [unk-env8] PRGD_OTU215_7e0b0020bfbe844f7e32f0d2fac879ad gb|KJ929727| PRGD_OTU215_7e0b0020bfbe844f7e32f0d2fac879ad, putative proteorhodopsin gene, partial cds. PRGD_OTU215_7e0b0020bfbe844f7e32f0d2fac879ad, putative proteorhodopsin gene, partial cds. KJ929727 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACCGTACCATTGCAAGTTTCTGAGTTCTACCTCATTCTTGCTGCCGTCGGCGTTGTCTCAGCCGCTCTCTTCTGGAAGCTCTTTGGCGCATCCATCATCATGCTCGTTGCTGGCTTCCTCGGCGAGGCTGGCCAAGCCAACGCGGAGCTAATGCTCGCTATCGGCGTAGCCGCTTGGCTTTACATCATCTACGAAATTTGGGCTGGTGAAGCAAAGAAGAGTGCAGAAAGTGCTTCCGAAGGAACCAAGTTCGCTTTCAAAGCCATGGCGCTTATCCTCACTGTA LITVPLQVSEFYLILAAVGVVSAALFWKLFGASIIMLVAGFLGEAGQANAELMLAIGVAAWLYIIYEIWAGEAKKSAESASEGTKFAFKAMALILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTACCATTGCAAGTTTCTGAGTTCTACCTCATTCTTGCTGCC---------GTC---GGCGTTGTCTCAGCC---GCTCTC------------------------------------TTCTGGAAG---CTCTTTGGCGCATCCATCATCATGCTCGTTGCTGGCTTCCTCGGCGAG---------GCT------------------GGC------------------------------------------------------------------------------CAA---------------------------GCCAACGCG------------------GAGCTAATG---CTCGCTATCGGCGTAGCCGCTTGGCTTTACATCATCTACGAAATT---------------TGG------GCT---GGTGAAGCAAAGAAG---AGTGCAGAA------AGT---GCTTCCGAAGGAACC---AAG---TTC---GCT---TTC---AAA---GCCATG---GCGCTTATCCTCACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---V-GVVSA-AL------------FWK-LFGASIIMLVAGFLGE---A------G--------------------------Q---------ANA------ELM-LAIGVAAWLYIIYEI-----W--A-GEAKK-SAE--S-ASEGT-K-F-A-F-K-AM-ALILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ929726 [unk-env8] PRGD_OTU215_otuREP_938c41ab303031c40c67e9c5e527d2be gb|KJ929726| PRGD_OTU215_otuREP_938c41ab303031c40c67e9c5e527d2be, putative proteorhodopsin gene, partial cds. PRGD_OTU215_otuREP_938c41ab303031c40c67e9c5e527d2be, putative proteorhodopsin gene, partial cds. KJ929726 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-35.05, 23.73) TTGATCACCGTACCATTGCAAGTTTCTGAGTTCTACCTCATTCTTGCTGCTGTTGGTGTTGTCTCAGCCGCTCTCTTCTGGAAGCTCTTTGGCGCATCCATCATCATGCTCGTTGCTGGCTTCCTCGGCGAGGCTGGCCACGCCAACGAAGAGCTAATGCTCGCTATCGGTGTAGCCGCTTGGGGTTACATCATCTACGAAATTTGGGTTGGTGACGCAAAGAAGAGTGCAGAAACTGCTTCCGAAGGAACCCAGTTCGCTTTCAAAGCCATGGCGCTTATCCTCACTGCA LITVPLQVSEFYLILAAVGVVSAALFWKLFGASIIMLVAGFLGEAGHANEELMLAIGVAAWGYIIYEIWVGDAKKSAETASEGTQFAFKAMALILTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTACCATTGCAAGTTTCTGAGTTCTACCTCATTCTTGCTGCT---------GTT---GGTGTTGTCTCAGCC---GCTCTC------------------------------------TTCTGGAAG---CTCTTTGGCGCATCCATCATCATGCTCGTTGCTGGCTTCCTCGGCGAG---------GCT------------------GGC------------------------------------------------------------------------------CAC---------------------------GCCAACGAA------------------GAGCTAATG---CTCGCTATCGGTGTAGCCGCTTGGGGTTACATCATCTACGAAATT---------------TGG------GTT---GGTGACGCAAAGAAG---AGTGCAGAA------ACT---GCTTCCGAAGGAACC---CAG---TTC---GCT---TTC---AAA---GCCATG---GCGCTTATCCTCACTGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---V-GVVSA-AL------------FWK-LFGASIIMLVAGFLGE---A------G--------------------------H---------ANE------ELM-LAIGVAAWGYIIYEI-----W--V-GDAKK-SAE--T-ASEGT-Q-F-A-F-K-AM-ALILTA-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ929669 [unk-env8] PRGD_OTU188_825a4178f52245de9b918478b5989f04 gb|KJ929669| PRGD_OTU188_825a4178f52245de9b918478b5989f04, putative proteorhodopsin gene, partial cds. PRGD_OTU188_825a4178f52245de9b918478b5989f04, putative proteorhodopsin gene, partial cds. KJ929669 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683) CTGATCACCGTTCCACTGCAGGTTTCTGAGTTCTACCTCATCCTCGCTGCCGTTGGTGTTGCTACCGCTGCACTCTTCTGGAAGCTCTTCGGTGCCTCCCTCGTCATGCTCATCGCTGGTTTCCTCGGCGAGGCCGAGATCCTCGGTGAAAGCACACGCATGCCAATGTTCATCGTCGGTATGCTCGCCTGGATTTACATCATCTACGAACTCTGGGCTGGTGAAGCCAAGGAGAAAGTCGGTGGTGCCAGCGAAGGTACGCAATTTGCTTTCAAGGCCATGACCCTCATCCTCACCTTC LITVPLQVSEFYLILAAVGVATAALFWKLFGASLVMLIAGFLGEAEILGESTRMPMFIVGMLAWIYIIYELWAGEAKEKVGGASEGTQFAFKAMTLILTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTTCCACTGCAGGTTTCTGAGTTCTACCTCATCCTCGCTGCC---------GTT---GGTGTTGCTACCGCT---GCACTC------------------------------------TTCTGGAAG---CTCTTCGGTGCCTCCCTCGTCATGCTCATCGCTGGTTTCCTCGGCGAG---------GCC------------------GAG------------------------------------------------------ATC------CTCGGT---------GAA---------------------------AGCACACGC------------------ATGCCAATG---TTCATCGTCGGTATGCTCGCCTGGATTTACATCATCTACGAACTC---------------TGG------GCT---GGTGAAGCCAAGGAG---AAAGTCGGT------GGT---GCCAGCGAAGGTACG---CAA---TTT---GCT---TTC---AAG---GCCATG---ACCCTCATCCTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---V-GVATA-AL------------FWK-LFGASLVMLIAGFLGE---A------E------------------I--LG---E---------STR------MPM-FIVGMLAWIYIIYEL-----W--A-GEAKE-KVG--G-ASEGT-Q-F-A-F-K-AM-TLILTF-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ929668 [unk-env8] PRGD_OTU188_otuREP_e14e6777c21a4f39bc9f07711ef4df86 gb|KJ929668| PRGD_OTU188_otuREP_e14e6777c21a4f39bc9f07711ef4df86, putative proteorhodopsin gene, partial cds. PRGD_OTU188_otuREP_e14e6777c21a4f39bc9f07711ef4df86, putative proteorhodopsin gene, partial cds. KJ929668 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) CTGATCACCGTTCCACTGCAGGTTTCTGAGTTCTACCTCATCCTCGCTGCTGTTGGTGTTGCTACCGCTGCGCTCTTCTGGAAGCTCTTCGGTGCCTCCCTGGTCATGCTCATCGCTGGTTTCCTCGGCGAGGCCGAGATTCTCGGCGAGAGCACACGCATGCCAATGTTCATCGTCGGTATGCTCGCCTGGATTTACATCATCTACGAACTCTGGGCTGGTGAAGCCAAGGAGAAAGTCGGTGGTGCCAGCGAAGGTACGCAATTTGCTTTCAAGGCCATGACCCTCATCCTCACCTTC LITVPLQVSEFYLILAAVGVATAALFWKLFGASLVMLIAGFLGEAEILGESTRMPMFIVGMLAWIYIIYELWAGEAKEKVGGASEGTQFAFKAMTLILTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTTCCACTGCAGGTTTCTGAGTTCTACCTCATCCTCGCTGCT---------GTT---GGTGTTGCTACCGCT---GCGCTC------------------------------------TTCTGGAAG---CTCTTCGGTGCCTCCCTGGTCATGCTCATCGCTGGTTTCCTCGGCGAG---------GCC------------------GAG------------------------------------------------------ATT------CTCGGC---------GAG---------------------------AGCACACGC------------------ATGCCAATG---TTCATCGTCGGTATGCTCGCCTGGATTTACATCATCTACGAACTC---------------TGG------GCT---GGTGAAGCCAAGGAG---AAAGTCGGT------GGT---GCCAGCGAAGGTACG---CAA---TTT---GCT---TTC---AAG---GCCATG---ACCCTCATCCTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---V-GVATA-AL------------FWK-LFGASLVMLIAGFLGE---A------E------------------I--LG---E---------STR------MPM-FIVGMLAWIYIIYEL-----W--A-GEAKE-KVG--G-ASEGT-Q-F-A-F-K-AM-TLILTF-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ929670 [unk-env8] PRGD_OTU188_b0d2f4150a36819c0ec16b018d908f52 gb|KJ929670| PRGD_OTU188_b0d2f4150a36819c0ec16b018d908f52, putative proteorhodopsin gene, partial cds. PRGD_OTU188_b0d2f4150a36819c0ec16b018d908f52, putative proteorhodopsin gene, partial cds. KJ929670 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683) CTGATCACCGTTCCACTGCAGGTTTCTGAGTTCTACCTCATCCTCGCTGCCGTTGGTGTTGCTACCGCCGCACTCTTCTGGAAGCTCTTCGGTGCCTCCCTGGTCATGCTCATCGCTGGTTTCCTCGGCGAAGCCGAGATCCTCGGTGAAAGCACACGCATGCCAATGTTCATCGTCGGTATGCTCGCCTGGATCTACATCATCTACGAACTCTGGGCTGGTGAAGCCAAGGAGAAGGTCGGTGGTGCCAGCGAAGGTACGCAATTTGCTTTCAAGGCCATGACCCTCATCCTCACCTTC LITVPLQVSEFYLILAAVGVATAALFWKLFGASLVMLIAGFLGEAEILGESTRMPMFIVGMLAWIYIIYELWAGEAKEKVGGASEGTQFAFKAMTLILTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTTCCACTGCAGGTTTCTGAGTTCTACCTCATCCTCGCTGCC---------GTT---GGTGTTGCTACCGCC---GCACTC------------------------------------TTCTGGAAG---CTCTTCGGTGCCTCCCTGGTCATGCTCATCGCTGGTTTCCTCGGCGAA---------GCC------------------GAG------------------------------------------------------ATC------CTCGGT---------GAA---------------------------AGCACACGC------------------ATGCCAATG---TTCATCGTCGGTATGCTCGCCTGGATCTACATCATCTACGAACTC---------------TGG------GCT---GGTGAAGCCAAGGAG---AAGGTCGGT------GGT---GCCAGCGAAGGTACG---CAA---TTT---GCT---TTC---AAG---GCCATG---ACCCTCATCCTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---V-GVATA-AL------------FWK-LFGASLVMLIAGFLGE---A------E------------------I--LG---E---------STR------MPM-FIVGMLAWIYIIYEL-----W--A-GEAKE-KVG--G-ASEGT-Q-F-A-F-K-AM-TLILTF-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ929768 [unk-env8] PRGD_OTU236_otuREP_2ad7c80d9e03de31add4a58077d88d0d gb|KJ929768| PRGD_OTU236_otuREP_2ad7c80d9e03de31add4a58077d88d0d, putative proteorhodopsin gene, partial cds. PRGD_OTU236_otuREP_2ad7c80d9e03de31add4a58077d88d0d, putative proteorhodopsin gene, partial cds. KJ929768 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATTACCGTTCCATTGCAAGTTTCTGAGTTCTACTTGATTCTTGCAGCCGTTGGTGTCGCAACAGCAGCTCTCTTCTGGAGACTCTTGGGCGCTTCCCTTGTCATGCTCATCGCTGGTTTCCTCGGTGAAGCCGAAAAGGCTCCTGAGATGCCAATGCTCGTCATTGGCGTCATCGCTTGGGTCTACATCATCTACGAAATCTGGGCTGGTGAAGCAAAGGAAAAGGTCAGCGAAACCAGCGAAGGTACGCAATTTGCATTCAAGGCAATGGCACTGATCCTAACTTTT LITVPLQVSEFYLILAAVGVATAALFWRLLGASLVMLIAGFLGEAEKAPEMPMLVIGVIAWVYIIYEIWAGEAKEKVSETSEGTQFAFKAMALILTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACCGTTCCATTGCAAGTTTCTGAGTTCTACTTGATTCTTGCAGCC---------GTT---GGTGTCGCAACAGCA---GCTCTC------------------------------------TTCTGGAGA---CTCTTGGGCGCTTCCCTTGTCATGCTCATCGCTGGTTTCCTCGGTGAA---------GCC------------------GAA------------------------------------------------------------------------------AAG---------------------------GCTCCTGAG------------------ATGCCAATG---CTCGTCATTGGCGTCATCGCTTGGGTCTACATCATCTACGAAATC---------------TGG------GCT---GGTGAAGCAAAGGAA---AAGGTCAGC------GAA---ACCAGCGAAGGTACG---CAA---TTT---GCA---TTC---AAG---GCAATG---GCACTGATCCTAACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---V-GVATA-AL------------FWR-LLGASLVMLIAGFLGE---A------E--------------------------K---------APE------MPM-LVIGVIAWVYIIYEI-----W--A-GEAKE-KVS--E-TSEGT-Q-F-A-F-K-AM-ALILTF-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ929769 [unk-env8] PRGD_OTU236_f5d11392ee5f587d81b5c75c68f5c597 gb|KJ929769| PRGD_OTU236_f5d11392ee5f587d81b5c75c68f5c597, putative proteorhodopsin gene, partial cds. PRGD_OTU236_f5d11392ee5f587d81b5c75c68f5c597, putative proteorhodopsin gene, partial cds. KJ929769 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-14.48, 113.45) TTGATTACCGTTCCATTGCAAGTTTCTGAGTTCTACTTGATTCTTGCAGCCGTTGGTGTCGCAACAGCAGCTCTCTTCTGGAGACTCTTGGGCGCTTCCCTTGTCATGCTCATCGCTGGTTTCCTCGGTGAAGCCGAAAAGGCTCCTGAGATGCCAATGCTCGTCATTGGAGTCATCGCTTGGCTCTACATCATCTACGAAATCTGGGCTGGTGAAGCAAAGGAAAAGGTCAGCGAAACCAGCGAAGGTACGCAATTTGCATTCAAGGCAATGGCACTGATCCTAACTTTT LITVPLQVSEFYLILAAVGVATAALFWRLLGASLVMLIAGFLGEAEKAPEMPMLVIGVIAWLYIIYEIWAGEAKEKVSETSEGTQFAFKAMALILTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACCGTTCCATTGCAAGTTTCTGAGTTCTACTTGATTCTTGCAGCC---------GTT---GGTGTCGCAACAGCA---GCTCTC------------------------------------TTCTGGAGA---CTCTTGGGCGCTTCCCTTGTCATGCTCATCGCTGGTTTCCTCGGTGAA---------GCC------------------GAA------------------------------------------------------------------------------AAG---------------------------GCTCCTGAG------------------ATGCCAATG---CTCGTCATTGGAGTCATCGCTTGGCTCTACATCATCTACGAAATC---------------TGG------GCT---GGTGAAGCAAAGGAA---AAGGTCAGC------GAA---ACCAGCGAAGGTACG---CAA---TTT---GCA---TTC---AAG---GCAATG---GCACTGATCCTAACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---V-GVATA-AL------------FWR-LLGASLVMLIAGFLGE---A------E--------------------------K---------APE------MPM-LVIGVIAWLYIIYEI-----W--A-GEAKE-KVS--E-TSEGT-Q-F-A-F-K-AM-ALILTF-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928874 [unk-env8] PRGD_OTU058_83fc9b774b513df8284d37d77c104970 gb|KJ928874| PRGD_OTU058_83fc9b774b513df8284d37d77c104970, putative proteorhodopsin gene, partial cds. PRGD_OTU058_83fc9b774b513df8284d37d77c104970, putative proteorhodopsin gene, partial cds. KJ928874 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACCGTACCATTGCAAGTCTCTGAGTTCTACCTCATTCTTGCTGCTATCGGTGTCGCTAGCGCCGCTCTCTTTTGGAGACTCTTTGGTGCATCGATCGTTATGCTCGTTGCTGGTTTCCTTGCAGAAGCTAACGAAGACATCAGTGCAATCAGTGACGGCATGGTATGGCCATTGTTCGCCGTTGGTATGCTCGCTTGGATTTACATCATCTACGAGATCTGGGCTGGTGAAGCAAAGGAAAGTGTTTCCGGCGCAAGCGAAGGCACACAATTTGCATTCAAGGCTATGGCTCTCATCCTCACTGTA LITVPLQVSEFYLILAAIGVASAALFWRLFGASIVMLVAGFLAEANEDISAISDGMVWPLFAVGMLAWIYIIYEIWAGEAKESVSGASEGTQFAFKAMALILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTACCATTGCAAGTCTCTGAGTTCTACCTCATTCTTGCTGCT---------ATC---GGTGTCGCTAGCGCC---GCTCTC------------------------------------TTTTGGAGA---CTCTTTGGTGCATCGATCGTTATGCTCGTTGCTGGTTTCCTTGCAGAA---------GCT------------------AAC------GAA---------------------------------GACATC---AGTGCA------ATCAGT---------GAC---------------------------GGCATGGTA------------------TGGCCATTG---TTCGCCGTTGGTATGCTCGCTTGGATTTACATCATCTACGAGATC---------------TGG------GCT---GGTGAAGCAAAGGAA---AGTGTTTCC------GGC---GCAAGCGAAGGCACA---CAA---TTT---GCA---TTC---AAG---GCTATG---GCTCTCATCCTCACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GVASA-AL------------FWR-LFGASIVMLVAGFLAE---A------N--E-----------DI-SA--IS---D---------GMV------WPL-FAVGMLAWIYIIYEI-----W--A-GEAKE-SVS--G-ASEGT-Q-F-A-F-K-AM-ALILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928871 [unk-env8] PRGD_OTU058_01c0da261256dd2d3d1757cf74ac3303 gb|KJ928871| PRGD_OTU058_01c0da261256dd2d3d1757cf74ac3303, putative proteorhodopsin gene, partial cds. PRGD_OTU058_01c0da261256dd2d3d1757cf74ac3303, putative proteorhodopsin gene, partial cds. KJ928871 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-23.5956, 69.0419) TTGATCACCGTACCATTGCAAGTCTCTGAGTTCTACCTCATTCTTGCTGCTATCGGTGTCGCTAGCGCCGCTCTCTTTTGGAGACTCTTTGGTGCATCCATCGTTATGCTCGTTGCTGGTTTCCTTGCAGAAGCTAACGAAGACATCAGTGCAATCAGTGACGGCATGGTATGGCCATTGTTCGCCGTTGGTATGCTCGCTTGGATTTACATCATCTACGAGATCTGGGCTGGTGAAGCAAAGGAAAGTGTTTCTGGAGCAAGCGAAGGCACACAATTTGCATTCAAGGCTATGGCTCTTATCCTCACAGTA LITVPLQVSEFYLILAAIGVASAALFWRLFGASIVMLVAGFLAEANEDISAISDGMVWPLFAVGMLAWIYIIYEIWAGEAKESVSGASEGTQFAFKAMALILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTACCATTGCAAGTCTCTGAGTTCTACCTCATTCTTGCTGCT---------ATC---GGTGTCGCTAGCGCC---GCTCTC------------------------------------TTTTGGAGA---CTCTTTGGTGCATCCATCGTTATGCTCGTTGCTGGTTTCCTTGCAGAA---------GCT------------------AAC------GAA---------------------------------GACATC---AGTGCA------ATCAGT---------GAC---------------------------GGCATGGTA------------------TGGCCATTG---TTCGCCGTTGGTATGCTCGCTTGGATTTACATCATCTACGAGATC---------------TGG------GCT---GGTGAAGCAAAGGAA---AGTGTTTCT------GGA---GCAAGCGAAGGCACA---CAA---TTT---GCA---TTC---AAG---GCTATG---GCTCTTATCCTCACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GVASA-AL------------FWR-LFGASIVMLVAGFLAE---A------N--E-----------DI-SA--IS---D---------GMV------WPL-FAVGMLAWIYIIYEI-----W--A-GEAKE-SVS--G-ASEGT-Q-F-A-F-K-AM-ALILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928872 [unk-env8] PRGD_OTU058_47c401f18217789efafe5a3b982f5a34 gb|KJ928872| PRGD_OTU058_47c401f18217789efafe5a3b982f5a34, putative proteorhodopsin gene, partial cds. PRGD_OTU058_47c401f18217789efafe5a3b982f5a34, putative proteorhodopsin gene, partial cds. KJ928872 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACCGTACCATTGCAAGTTTCTGAGTTCTACCTCATCCTTGCTGCTATCGGTGTCGCTAGCGCGGCTCTCTTTTGGAGACTCTTTGGTGCATCCATCGTTATGCTCGTTGCTGGTTTCCTTGCAGAAGCTAACGAAGACATCAGTGCAATCAGCGAAGGCATGGTATGGCCATTGTTCGCCGTTGGTGTGCTCGCTTGGATTTACATCATCTACGAGATCTGGGCTGGTGAAGCAAAGGAAAGTGTTTCCGGCGCAAGCGAAGGCACACAATTTGCATTCAAGGCTATGGCTCTTATCCTCACTGTA LITVPLQVSEFYLILAAIGVASAALFWRLFGASIVMLVAGFLAEANEDISAISEGMVWPLFAVGVLAWIYIIYEIWAGEAKESVSGASEGTQFAFKAMALILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTACCATTGCAAGTTTCTGAGTTCTACCTCATCCTTGCTGCT---------ATC---GGTGTCGCTAGCGCG---GCTCTC------------------------------------TTTTGGAGA---CTCTTTGGTGCATCCATCGTTATGCTCGTTGCTGGTTTCCTTGCAGAA---------GCT------------------AAC------GAA---------------------------------GACATC---AGTGCA------ATCAGC---------GAA---------------------------GGCATGGTA------------------TGGCCATTG---TTCGCCGTTGGTGTGCTCGCTTGGATTTACATCATCTACGAGATC---------------TGG------GCT---GGTGAAGCAAAGGAA---AGTGTTTCC------GGC---GCAAGCGAAGGCACA---CAA---TTT---GCA---TTC---AAG---GCTATG---GCTCTTATCCTCACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GVASA-AL------------FWR-LFGASIVMLVAGFLAE---A------N--E-----------DI-SA--IS---E---------GMV------WPL-FAVGVLAWIYIIYEI-----W--A-GEAKE-SVS--G-ASEGT-Q-F-A-F-K-AM-ALILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928873 [unk-env8] PRGD_OTU058_5a13cc32892d6cee6f7c0d72f5741852 gb|KJ928873| PRGD_OTU058_5a13cc32892d6cee6f7c0d72f5741852, putative proteorhodopsin gene, partial cds. PRGD_OTU058_5a13cc32892d6cee6f7c0d72f5741852, putative proteorhodopsin gene, partial cds. KJ928873 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTGATCACTGTACCATTGCAAGTGTCTGAGTTCTACCTCATTCTTGCTGCTATCGGTGTCGCTAGCGCCGCTCTCTTTTGGAGACTCTTTGGTGCATCCATCGTTATGCTCGTTGCTGGTTTCCTTGCAGAAGCTAATGCAGACATCAGCGCAATCAGTGAAGGCATGGTATGGCCATTGTTCGCTGTTGGTTTGCTCGCTTGGATTTACATCATCTACGAAATCTGGGCTGGTGAGGCAAAGGAAAGTGTTTCCGACGCAAGCGAAGGTACACAATTTGCATTCAAGGCTATGGCTCTCATCCTCACTGTA LITVPLQVSEFYLILAAIGVASAALFWRLFGASIVMLVAGFLAEANADISAISEGMVWPLFAVGLLAWIYIIYEIWAGEAKESVSDASEGTQFAFKAMALILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTACCATTGCAAGTGTCTGAGTTCTACCTCATTCTTGCTGCT---------ATC---GGTGTCGCTAGCGCC---GCTCTC------------------------------------TTTTGGAGA---CTCTTTGGTGCATCCATCGTTATGCTCGTTGCTGGTTTCCTTGCAGAA---------GCT------------------AAT------GCA---------------------------------GACATC---AGCGCA------ATCAGT---------GAA---------------------------GGCATGGTA------------------TGGCCATTG---TTCGCTGTTGGTTTGCTCGCTTGGATTTACATCATCTACGAAATC---------------TGG------GCT---GGTGAGGCAAAGGAA---AGTGTTTCC------GAC---GCAAGCGAAGGTACA---CAA---TTT---GCA---TTC---AAG---GCTATG---GCTCTCATCCTCACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GVASA-AL------------FWR-LFGASIVMLVAGFLAE---A------N--A-----------DI-SA--IS---E---------GMV------WPL-FAVGLLAWIYIIYEI-----W--A-GEAKE-SVS--D-ASEGT-Q-F-A-F-K-AM-ALILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928878 [unk-env8] PRGD_OTU058_a8b947afea48f73d6f0f2dcf3a9f332a gb|KJ928878| PRGD_OTU058_a8b947afea48f73d6f0f2dcf3a9f332a, putative proteorhodopsin gene, partial cds. PRGD_OTU058_a8b947afea48f73d6f0f2dcf3a9f332a, putative proteorhodopsin gene, partial cds. KJ928878 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTGATCACTGTACCATTGCAAGTGTCTGAGTTCTACCTCATTCTTGCTGCTATCGGTGTCGCTAGCGCCGCTCTATTTTGGAGACTCTTTGGTGCATCCATCGTTATGCTCGTTGCTGGTTTCCTTGCAGAAGCTAATGCAGACATCAGTGCAATCAGTGAAGGCATGGTATGGCCATTGTTCGCTGTTGGTTTGCTCGCTTGGATCTACATCATCTACGAGATCTGGGCTGGTGAGGCAAAGGAAAGTGTTTCCGACGCAAGCGAAGGTACACAATTTGCATTCAAGGCTATGGCTCTCATCCTCACTGTA LITVPLQVSEFYLILAAIGVASAALFWRLFGASIVMLVAGFLAEANADISAISEGMVWPLFAVGLLAWIYIIYEIWAGEAKESVSDASEGTQFAFKAMALILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTACCATTGCAAGTGTCTGAGTTCTACCTCATTCTTGCTGCT---------ATC---GGTGTCGCTAGCGCC---GCTCTA------------------------------------TTTTGGAGA---CTCTTTGGTGCATCCATCGTTATGCTCGTTGCTGGTTTCCTTGCAGAA---------GCT------------------AAT------GCA---------------------------------GACATC---AGTGCA------ATCAGT---------GAA---------------------------GGCATGGTA------------------TGGCCATTG---TTCGCTGTTGGTTTGCTCGCTTGGATCTACATCATCTACGAGATC---------------TGG------GCT---GGTGAGGCAAAGGAA---AGTGTTTCC------GAC---GCAAGCGAAGGTACA---CAA---TTT---GCA---TTC---AAG---GCTATG---GCTCTCATCCTCACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GVASA-AL------------FWR-LFGASIVMLVAGFLAE---A------N--A-----------DI-SA--IS---E---------GMV------WPL-FAVGLLAWIYIIYEI-----W--A-GEAKE-SVS--D-ASEGT-Q-F-A-F-K-AM-ALILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928875 [unk-env8] PRGD_OTU058_8cb329fa1deac88919e61ddc4d2ea85a gb|KJ928875| PRGD_OTU058_8cb329fa1deac88919e61ddc4d2ea85a, putative proteorhodopsin gene, partial cds. PRGD_OTU058_8cb329fa1deac88919e61ddc4d2ea85a, putative proteorhodopsin gene, partial cds. KJ928875 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATCACTGTACCATTGCAAGTCTCTGAGTTCTACCTCATTCTTGCTGCTATCGGTGTCGCTAGCGCCGCTCTCTTCTGGAGACTCTTTGGTGCATCCATCGTTATGCTCGTTGCTGGTTTCCTTGCAGAAGCTAATGCAGACATCAGTGCAATCAGTGAAGGCATGGTATGGCCATTGTTCGCCGTTGGTTTGCTCGCTTGGATTTACATCATCTACGAAATCTGGGCTGGTGAAGCAAAGGAAAGTGTTTCCGACGCAAGCGAAGGCACACAATTTGCATTCAAGGCGATGGCTCTTATCCTCACTGTA LITVPLQVSEFYLILAAIGVASAALFWRLFGASIVMLVAGFLAEANADISAISEGMVWPLFAVGLLAWIYIIYEIWAGEAKESVSDASEGTQFAFKAMALILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTACCATTGCAAGTCTCTGAGTTCTACCTCATTCTTGCTGCT---------ATC---GGTGTCGCTAGCGCC---GCTCTC------------------------------------TTCTGGAGA---CTCTTTGGTGCATCCATCGTTATGCTCGTTGCTGGTTTCCTTGCAGAA---------GCT------------------AAT------GCA---------------------------------GACATC---AGTGCA------ATCAGT---------GAA---------------------------GGCATGGTA------------------TGGCCATTG---TTCGCCGTTGGTTTGCTCGCTTGGATTTACATCATCTACGAAATC---------------TGG------GCT---GGTGAAGCAAAGGAA---AGTGTTTCC------GAC---GCAAGCGAAGGCACA---CAA---TTT---GCA---TTC---AAG---GCGATG---GCTCTTATCCTCACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GVASA-AL------------FWR-LFGASIVMLVAGFLAE---A------N--A-----------DI-SA--IS---E---------GMV------WPL-FAVGLLAWIYIIYEI-----W--A-GEAKE-SVS--D-ASEGT-Q-F-A-F-K-AM-ALILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928881 [unk-env8] PRGD_OTU058_d2c0a43148d6fad44bbcabc2a1fbf893 gb|KJ928881| PRGD_OTU058_d2c0a43148d6fad44bbcabc2a1fbf893, putative proteorhodopsin gene, partial cds. PRGD_OTU058_d2c0a43148d6fad44bbcabc2a1fbf893, putative proteorhodopsin gene, partial cds. KJ928881 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACCGTACCATTGCAAGTCTCTGAGTTCTATCTCATTCTTGCTGCTATCGGTGTCGCTAGTGCCGCTCTCTTTTGGAGACTCTTTGGTGCATCCATCGTTATGCTCGTTGCTGGTTTCCTTGCAGAAGCTAACGCAGACATCAGTGCAATCAGTGAAGGCATGGTATGGCCATTGTTCGCCGTTGGTATGCTCGCTTGGATTTACATCATCTACGAGATCTGGGCTGGTGAAGCAAAGGAAAGTGTTTCTGGCGCAAGCGAAGGCACACAATTTGCATTCAAGGCTATGGCGCTTATCCTCACTGTA LITVPLQVSEFYLILAAIGVASAALFWRLFGASIVMLVAGFLAEANADISAISEGMVWPLFAVGMLAWIYIIYEIWAGEAKESVSGASEGTQFAFKAMALILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTACCATTGCAAGTCTCTGAGTTCTATCTCATTCTTGCTGCT---------ATC---GGTGTCGCTAGTGCC---GCTCTC------------------------------------TTTTGGAGA---CTCTTTGGTGCATCCATCGTTATGCTCGTTGCTGGTTTCCTTGCAGAA---------GCT------------------AAC------GCA---------------------------------GACATC---AGTGCA------ATCAGT---------GAA---------------------------GGCATGGTA------------------TGGCCATTG---TTCGCCGTTGGTATGCTCGCTTGGATTTACATCATCTACGAGATC---------------TGG------GCT---GGTGAAGCAAAGGAA---AGTGTTTCT------GGC---GCAAGCGAAGGCACA---CAA---TTT---GCA---TTC---AAG---GCTATG---GCGCTTATCCTCACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GVASA-AL------------FWR-LFGASIVMLVAGFLAE---A------N--A-----------DI-SA--IS---E---------GMV------WPL-FAVGMLAWIYIIYEI-----W--A-GEAKE-SVS--G-ASEGT-Q-F-A-F-K-AM-ALILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928879 [unk-env8] PRGD_OTU058_aa2f92a9e4a849bb0b1a590faffb4eeb gb|KJ928879| PRGD_OTU058_aa2f92a9e4a849bb0b1a590faffb4eeb, putative proteorhodopsin gene, partial cds. PRGD_OTU058_aa2f92a9e4a849bb0b1a590faffb4eeb, putative proteorhodopsin gene, partial cds. KJ928879 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -33.28, 45.35) TTGATCACCGTACCATTGCAAGTGTCTGAGTTCTACCTCATTCTTGCTGCTATCGGTGTCGCTAGCGCCGCTCTCTTCTGGAGACTCTTCGGTGCATCCATCGTTATGCTCGTTGCTGGTTTCCTCGCAGAGGCAAACGAAAGCATCGATGCAATCAGCGACGGCATGGTATGGCCATTGTTCATCGTCGGTATGCTCGCTTGGATCTACATCATCTACGAGATCTGGGCTGGTGAAGCAAAGGAAAGTGTTTCTGACGCAAGCGAAGGTACACAATTTGCATTCAAGGCTATGGCTCTCATCCTCACTGTA LITVPLQVSEFYLILAAIGVASAALFWRLFGASIVMLVAGFLAEANESIDAISDGMVWPLFIVGMLAWIYIIYEIWAGEAKESVSDASEGTQFAFKAMALILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTACCATTGCAAGTGTCTGAGTTCTACCTCATTCTTGCTGCT---------ATC---GGTGTCGCTAGCGCC---GCTCTC------------------------------------TTCTGGAGA---CTCTTCGGTGCATCCATCGTTATGCTCGTTGCTGGTTTCCTCGCAGAG---------GCA------------------AAC------GAA---------------------------------AGCATC---GATGCA------ATCAGC---------GAC---------------------------GGCATGGTA------------------TGGCCATTG---TTCATCGTCGGTATGCTCGCTTGGATCTACATCATCTACGAGATC---------------TGG------GCT---GGTGAAGCAAAGGAA---AGTGTTTCT------GAC---GCAAGCGAAGGTACA---CAA---TTT---GCA---TTC---AAG---GCTATG---GCTCTCATCCTCACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GVASA-AL------------FWR-LFGASIVMLVAGFLAE---A------N--E-----------SI-DA--IS---D---------GMV------WPL-FIVGMLAWIYIIYEI-----W--A-GEAKE-SVS--D-ASEGT-Q-F-A-F-K-AM-ALILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928870 [unk-env8] PRGD_OTU058_otuREP_c85d1d5d3ffeb3834ae23cd118dcef3a gb|KJ928870| PRGD_OTU058_otuREP_c85d1d5d3ffeb3834ae23cd118dcef3a, putative proteorhodopsin gene, partial cds. PRGD_OTU058_otuREP_c85d1d5d3ffeb3834ae23cd118dcef3a, putative proteorhodopsin gene, partial cds. KJ928870 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) TTGATCACTGTGCCATTGCAAGTCTCTGAGTTCTACCTCATTCTTGCTGCTATCGGTGTCGCTAGTGCTGCTCTCTTCTGGAGACTCTTTGGTGCATCCATCGTTATGCTCGTTGCTGGTTTCCTCGCTGAAGCCGAGGCAAGTATCGATGCAGTCAGCGAAAGCATGGTATGGCCATTGTTCATCGTTGGTATGCTCGCTTGGATCTACATCATCTATGAGATTTGGGCTGGTGAAGCAAAGGAAAGTGTTTCCGACGCAAGCGAAGGTACACAATTTGCATTCAAGGCTATGGCTCTCATCCTCACTGTA LITVPLQVSEFYLILAAIGVASAALFWRLFGASIVMLVAGFLAEAEASIDAVSESMVWPLFIVGMLAWIYIIYEIWAGEAKESVSDASEGTQFAFKAMALILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCATTGCAAGTCTCTGAGTTCTACCTCATTCTTGCTGCT---------ATC---GGTGTCGCTAGTGCT---GCTCTC------------------------------------TTCTGGAGA---CTCTTTGGTGCATCCATCGTTATGCTCGTTGCTGGTTTCCTCGCTGAA---------GCC------------------GAG------GCA---------------------------------AGTATC---GATGCA------GTCAGC---------GAA---------------------------AGCATGGTA------------------TGGCCATTG---TTCATCGTTGGTATGCTCGCTTGGATCTACATCATCTATGAGATT---------------TGG------GCT---GGTGAAGCAAAGGAA---AGTGTTTCC------GAC---GCAAGCGAAGGTACA---CAA---TTT---GCA---TTC---AAG---GCTATG---GCTCTCATCCTCACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GVASA-AL------------FWR-LFGASIVMLVAGFLAE---A------E--A-----------SI-DA--VS---E---------SMV------WPL-FIVGMLAWIYIIYEI-----W--A-GEAKE-SVS--D-ASEGT-Q-F-A-F-K-AM-ALILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928885 [unk-env8] PRGD_OTU058_e6224aa1076b8633b87667f5cecedd42 gb|KJ928885| PRGD_OTU058_e6224aa1076b8633b87667f5cecedd42, putative proteorhodopsin gene, partial cds. PRGD_OTU058_e6224aa1076b8633b87667f5cecedd42, putative proteorhodopsin gene, partial cds. KJ928885 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTGATCACCGTGCCATTGCAAGTTTCTGAGTTCTACCTCATCCTTGCTGCTATCGGTGTCGCTAGCGCCGCTCTCTTCTGGAGACTCTTCGGTGCATCCATCGTTATGCTCGTTGCTGGTTTCCTCGCAGAGGCAAACGAAAGCATCGAAGCGATCAGCGACGGCATGGTATGGCCATTGTTCATCGTTGGTATGCTCGCTTGGATCTACATCATCTACGAGATCTGGGCTGGTGAAGCAAAGGAAAGTGTTTCCGACGCAAGCGAAGGCACACAATTTGCATTCAAGGCTATGGCTCTCATCCTCACTGTA LITVPLQVSEFYLILAAIGVASAALFWRLFGASIVMLVAGFLAEANESIEAISDGMVWPLFIVGMLAWIYIIYEIWAGEAKESVSDASEGTQFAFKAMALILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTGCCATTGCAAGTTTCTGAGTTCTACCTCATCCTTGCTGCT---------ATC---GGTGTCGCTAGCGCC---GCTCTC------------------------------------TTCTGGAGA---CTCTTCGGTGCATCCATCGTTATGCTCGTTGCTGGTTTCCTCGCAGAG---------GCA------------------AAC------GAA---------------------------------AGCATC---GAAGCG------ATCAGC---------GAC---------------------------GGCATGGTA------------------TGGCCATTG---TTCATCGTTGGTATGCTCGCTTGGATCTACATCATCTACGAGATC---------------TGG------GCT---GGTGAAGCAAAGGAA---AGTGTTTCC------GAC---GCAAGCGAAGGCACA---CAA---TTT---GCA---TTC---AAG---GCTATG---GCTCTCATCCTCACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GVASA-AL------------FWR-LFGASIVMLVAGFLAE---A------N--E-----------SI-EA--IS---D---------GMV------WPL-FIVGMLAWIYIIYEI-----W--A-GEAKE-SVS--D-ASEGT-Q-F-A-F-K-AM-ALILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928877 [unk-env8] PRGD_OTU058_936935e562418160fd7433d28b9df825 gb|KJ928877| PRGD_OTU058_936935e562418160fd7433d28b9df825, putative proteorhodopsin gene, partial cds. PRGD_OTU058_936935e562418160fd7433d28b9df825, putative proteorhodopsin gene, partial cds. KJ928877 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACCGTACCATTGCAAGTTTCTGAGTTCTACCTCATCCTCGCTGCTATCGGTGTCGCTAGCGCCGCTCTCTTCTGGAGACTCTTCGGTGCGTCCATTGTTATGCTCGTTGCTGGTTTCCTCGCAGAGGCAAACGAAAGCATCGATGCAGTCAGTGACGGCATGGTATGGCCATTGTTCGCCGTTGGTATGCTCGCTTGGATCTACATCATCTACGAGATCTGGGCTGGTGAAGCAAAGGAAAGTGTTTCCGACGCAAGCGAAGGTACCCAATTTGCATTCAAGGCTATGGCTCTTATCCTCACTGTA LITVPLQVSEFYLILAAIGVASAALFWRLFGASIVMLVAGFLAEANESIDAVSDGMVWPLFAVGMLAWIYIIYEIWAGEAKESVSDASEGTQFAFKAMALILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTACCATTGCAAGTTTCTGAGTTCTACCTCATCCTCGCTGCT---------ATC---GGTGTCGCTAGCGCC---GCTCTC------------------------------------TTCTGGAGA---CTCTTCGGTGCGTCCATTGTTATGCTCGTTGCTGGTTTCCTCGCAGAG---------GCA------------------AAC------GAA---------------------------------AGCATC---GATGCA------GTCAGT---------GAC---------------------------GGCATGGTA------------------TGGCCATTG---TTCGCCGTTGGTATGCTCGCTTGGATCTACATCATCTACGAGATC---------------TGG------GCT---GGTGAAGCAAAGGAA---AGTGTTTCC------GAC---GCAAGCGAAGGTACC---CAA---TTT---GCA---TTC---AAG---GCTATG---GCTCTTATCCTCACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GVASA-AL------------FWR-LFGASIVMLVAGFLAE---A------N--E-----------SI-DA--VS---D---------GMV------WPL-FAVGMLAWIYIIYEI-----W--A-GEAKE-SVS--D-ASEGT-Q-F-A-F-K-AM-ALILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928880 [unk-env8] PRGD_OTU058_b0661de2b655836c8bca610f99a7715a gb|KJ928880| PRGD_OTU058_b0661de2b655836c8bca610f99a7715a, putative proteorhodopsin gene, partial cds. PRGD_OTU058_b0661de2b655836c8bca610f99a7715a, putative proteorhodopsin gene, partial cds. KJ928880 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACCGTACCATTGCAAGTCTCTGAGTTCTACCTCATTCTTGCTGCTATCGGTGTCGCTAGCGCCGCTCTCTTCTGGAGACTCTTCGGTGCATCCATCGTTATGCTCGTTGCTGGTTTCCTCGCAGAGGCAAACGAAAGCATCGAAGCAATCAGCGACGGCATGGTATGGCCATTGTTCGCCGTTGGTATGCTCGCTTGGATTTACATCATCTACGAGATCTGGGCTGGTGAAGCAAAGGAAAGTGTTTCCGACGCAAGCGAAGGTACCCAATTTGCATTCAAGGCTATGGCTCTTATCCTAACTGTA LITVPLQVSEFYLILAAIGVASAALFWRLFGASIVMLVAGFLAEANESIEAISDGMVWPLFAVGMLAWIYIIYEIWAGEAKESVSDASEGTQFAFKAMALILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTACCATTGCAAGTCTCTGAGTTCTACCTCATTCTTGCTGCT---------ATC---GGTGTCGCTAGCGCC---GCTCTC------------------------------------TTCTGGAGA---CTCTTCGGTGCATCCATCGTTATGCTCGTTGCTGGTTTCCTCGCAGAG---------GCA------------------AAC------GAA---------------------------------AGCATC---GAAGCA------ATCAGC---------GAC---------------------------GGCATGGTA------------------TGGCCATTG---TTCGCCGTTGGTATGCTCGCTTGGATTTACATCATCTACGAGATC---------------TGG------GCT---GGTGAAGCAAAGGAA---AGTGTTTCC------GAC---GCAAGCGAAGGTACC---CAA---TTT---GCA---TTC---AAG---GCTATG---GCTCTTATCCTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GVASA-AL------------FWR-LFGASIVMLVAGFLAE---A------N--E-----------SI-EA--IS---D---------GMV------WPL-FAVGMLAWIYIIYEI-----W--A-GEAKE-SVS--D-ASEGT-Q-F-A-F-K-AM-ALILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928876 [unk-env8] PRGD_OTU058_9005f8d70eb3da8537c73f73fd7c4e57 gb|KJ928876| PRGD_OTU058_9005f8d70eb3da8537c73f73fd7c4e57, putative proteorhodopsin gene, partial cds. PRGD_OTU058_9005f8d70eb3da8537c73f73fd7c4e57, putative proteorhodopsin gene, partial cds. KJ928876 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-33.28, 45.35) TTGATCACCGTACCATTGCAAGTCTCTGAGTTCTACCTCATTCTTGCTGCTATCGGTGTCGCTAGCGCCGCTCTCTTCTGGAGACTCTTCGGTGCATCCATCGTTATGCTCATTGCTGGTTTCCTTGCGGAAGCTGAAGCAGACATTAGTGCAATCAGTGAAGGCATGGTATGGCCATTGTTCGCTGTTGGTTTGCTCGCTTGGATCTACATCATCTACGAGATCTGGGCTGGTGAAGCAAAGGAAAGTGTTTCCGACGCAAGCGAAGGTACACAATTTGCATTCAAGGCTATGGCTCTCATCCTCACTGTA LITVPLQVSEFYLILAAIGVASAALFWRLFGASIVMLIAGFLAEAEADISAISEGMVWPLFAVGLLAWIYIIYEIWAGEAKESVSDASEGTQFAFKAMALILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTACCATTGCAAGTCTCTGAGTTCTACCTCATTCTTGCTGCT---------ATC---GGTGTCGCTAGCGCC---GCTCTC------------------------------------TTCTGGAGA---CTCTTCGGTGCATCCATCGTTATGCTCATTGCTGGTTTCCTTGCGGAA---------GCT------------------GAA------GCA---------------------------------GACATT---AGTGCA------ATCAGT---------GAA---------------------------GGCATGGTA------------------TGGCCATTG---TTCGCTGTTGGTTTGCTCGCTTGGATCTACATCATCTACGAGATC---------------TGG------GCT---GGTGAAGCAAAGGAA---AGTGTTTCC------GAC---GCAAGCGAAGGTACA---CAA---TTT---GCA---TTC---AAG---GCTATG---GCTCTCATCCTCACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GVASA-AL------------FWR-LFGASIVMLIAGFLAE---A------E--A-----------DI-SA--IS---E---------GMV------WPL-FAVGLLAWIYIIYEI-----W--A-GEAKE-SVS--D-ASEGT-Q-F-A-F-K-AM-ALILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928884 [unk-env8] PRGD_OTU058_e48a4c56e8750689d52e89a648cbed94 gb|KJ928884| PRGD_OTU058_e48a4c56e8750689d52e89a648cbed94, putative proteorhodopsin gene, partial cds. PRGD_OTU058_e48a4c56e8750689d52e89a648cbed94, putative proteorhodopsin gene, partial cds. KJ928884 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTGATCACCGTACCATTGCAAGTCTCTGAGTTCTACCTCATTCTTGCTGCTATCGGTGTCGCTAGCGCCGCTCTCTTCTGGAGACTCTTCGGTGCATCCATCGTCATGCTCGTCGCTGGTTTCCTTGCGGAAGCTGAAGCAGACATCAGTGCAATCTCTGAAGGCATGGTATGGCCATTGTTCGCTGTTGGTATGCTCGCTTGGATTTACATCATTTACGAGATCTGGGCTGGCGAAGCAAAGGAAAGTGTTTCCGATGCAAGCGAAGGTACACAATTCGCATTCAAGGCTATGGCTCTCATCCTCACTGTA LITVPLQVSEFYLILAAIGVASAALFWRLFGASIVMLVAGFLAEAEADISAISEGMVWPLFAVGMLAWIYIIYEIWAGEAKESVSDASEGTQFAFKAMALILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTACCATTGCAAGTCTCTGAGTTCTACCTCATTCTTGCTGCT---------ATC---GGTGTCGCTAGCGCC---GCTCTC------------------------------------TTCTGGAGA---CTCTTCGGTGCATCCATCGTCATGCTCGTCGCTGGTTTCCTTGCGGAA---------GCT------------------GAA------GCA---------------------------------GACATC---AGTGCA------ATCTCT---------GAA---------------------------GGCATGGTA------------------TGGCCATTG---TTCGCTGTTGGTATGCTCGCTTGGATTTACATCATTTACGAGATC---------------TGG------GCT---GGCGAAGCAAAGGAA---AGTGTTTCC------GAT---GCAAGCGAAGGTACA---CAA---TTC---GCA---TTC---AAG---GCTATG---GCTCTCATCCTCACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GVASA-AL------------FWR-LFGASIVMLVAGFLAE---A------E--A-----------DI-SA--IS---E---------GMV------WPL-FAVGMLAWIYIIYEI-----W--A-GEAKE-SVS--D-ASEGT-Q-F-A-F-K-AM-ALILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928882 [unk-env8] PRGD_OTU058_dc563ed7f1f14e7658ffaf4aa6c6e450 gb|KJ928882| PRGD_OTU058_dc563ed7f1f14e7658ffaf4aa6c6e450, putative proteorhodopsin gene, partial cds. PRGD_OTU058_dc563ed7f1f14e7658ffaf4aa6c6e450, putative proteorhodopsin gene, partial cds. KJ928882 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACCGTACCATTGCAAGTTTCTGAGTTCTATCTCATTCTTGCTGCTATCGGTGTCGCTAGCGCCGCTCTCTTCTGGAGACTCTTCGGTGCATCCATTGTTATGCTCGTTGCTGGTTTCCTCGCAGAAGCTCACGAAGACATTGGTGCAGTCAGCGACGGTATGGTTTGGCCATTGTTCATCGTTGGAATGCTCGCTTGGATCTACATCATCTACGAGATTTGGGCTGGTGAAGCAAAGGAGAATGTTTCCGGTGCAAGCGAAGGTACACAATTCGCATTCAAGGCTATGGCTCTCATCCTCACTGTA LITVPLQVSEFYLILAAIGVASAALFWRLFGASIVMLVAGFLAEAHEDIGAVSDGMVWPLFIVGMLAWIYIIYEIWAGEAKENVSGASEGTQFAFKAMALILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTACCATTGCAAGTTTCTGAGTTCTATCTCATTCTTGCTGCT---------ATC---GGTGTCGCTAGCGCC---GCTCTC------------------------------------TTCTGGAGA---CTCTTCGGTGCATCCATTGTTATGCTCGTTGCTGGTTTCCTCGCAGAA---------GCT------------------CAC------GAA---------------------------------GACATT---GGTGCA------GTCAGC---------GAC---------------------------GGTATGGTT------------------TGGCCATTG---TTCATCGTTGGAATGCTCGCTTGGATCTACATCATCTACGAGATT---------------TGG------GCT---GGTGAAGCAAAGGAG---AATGTTTCC------GGT---GCAAGCGAAGGTACA---CAA---TTC---GCA---TTC---AAG---GCTATG---GCTCTCATCCTCACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GVASA-AL------------FWR-LFGASIVMLVAGFLAE---A------H--E-----------DI-GA--VS---D---------GMV------WPL-FIVGMLAWIYIIYEI-----W--A-GEAKE-NVS--G-ASEGT-Q-F-A-F-K-AM-ALILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928883 [unk-env8] PRGD_OTU058_e0f3fb73769c1d5b82cd38e42fa5ba9b gb|KJ928883| PRGD_OTU058_e0f3fb73769c1d5b82cd38e42fa5ba9b, putative proteorhodopsin gene, partial cds. PRGD_OTU058_e0f3fb73769c1d5b82cd38e42fa5ba9b, putative proteorhodopsin gene, partial cds. KJ928883 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATCACCGTACCATTGCAAGTTTCTGAGTTCTATCTCATTCTTGCTGCTATCGGTGTCGCTAGCGCCGCTCTCTTCTGGAGACTCTTCGGTGCATCCATTGTTATGCTCGTTGCTGGTTTCCTCGCAGAAGCTCACGAAGACATTGGTGCAGTCAGCGACGGTATGGTTTGGCCATTGTTCATCGTTGGAATGCTCGCTTGGATCTACATCATCTACGAGATTTGGGCTGGTGAAGCAAAGGACAATGTTTCCGGTGCAAGCGAAGGTACACAATTCGCATTCAAGGCTATGGCTCTCATCCTCACTGTA LITVPLQVSEFYLILAAIGVASAALFWRLFGASIVMLVAGFLAEAHEDIGAVSDGMVWPLFIVGMLAWIYIIYEIWAGEAKDNVSGASEGTQFAFKAMALILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACCGTACCATTGCAAGTTTCTGAGTTCTATCTCATTCTTGCTGCT---------ATC---GGTGTCGCTAGCGCC---GCTCTC------------------------------------TTCTGGAGA---CTCTTCGGTGCATCCATTGTTATGCTCGTTGCTGGTTTCCTCGCAGAA---------GCT------------------CAC------GAA---------------------------------GACATT---GGTGCA------GTCAGC---------GAC---------------------------GGTATGGTT------------------TGGCCATTG---TTCATCGTTGGAATGCTCGCTTGGATCTACATCATCTACGAGATT---------------TGG------GCT---GGTGAAGCAAAGGAC---AATGTTTCC------GGT---GCAAGCGAAGGTACA---CAA---TTC---GCA---TTC---AAG---GCTATG---GCTCTCATCCTCACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GVASA-AL------------FWR-LFGASIVMLVAGFLAE---A------H--E-----------DI-GA--VS---D---------GMV------WPL-FIVGMLAWIYIIYEI-----W--A-GEAKD-NVS--G-ASEGT-Q-F-A-F-K-AM-ALILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928274 [unk-env8] PRGD_OTU030_4f8085b149e46cc71638bd2c11dcfa12 gb|KJ928274| PRGD_OTU030_4f8085b149e46cc71638bd2c11dcfa12, putative proteorhodopsin gene, partial cds. PRGD_OTU030_4f8085b149e46cc71638bd2c11dcfa12, putative proteorhodopsin gene, partial cds. KJ928274 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) TTGATCACAGTGCCGCTACAGGTATCTGAATTCTACCTAATTCTAGCAGCAATTGGTGCAGCATCCGCTGTATTGTTCTGGAAGCTATTCGGAGCATCTCTAGTAATGCTAATCGCTGGATTCTTGTCCGAAGCAGAGATTGACAGCATTGGAGATGGAGCAGACAAAGTTCTATTCGCAGTCGGTGTACTAGCATGGCTATACATCATCTACGAGCTATGGGCTGGAGAAGCAAAGGAGAAAGTCAGCGATGCAAGCGAAGGTACACAATTCGCTTTCAAAGCAATGGCACTTATCCTAACCGTC LITVPLQVSEFYLILAAIGAASAVLFWKLFGASLVMLIAGFLSEAEIDSIGDGADKVLFAVGVLAWLYIIYELWAGEAKEKVSDASEGTQFAFKAMALILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCGCTACAGGTATCTGAATTCTACCTAATTCTAGCAGCA---------ATT---GGTGCAGCATCCGCT---GTATTG------------------------------------TTCTGGAAG---CTATTCGGAGCATCTCTAGTAATGCTAATCGCTGGATTCTTGTCCGAA---------GCA------------------GAG---------------------------------------------ATT---GACAGC------ATTGGA---------GAT---------------------------GGAGCAGAC------------------AAAGTTCTA---TTCGCAGTCGGTGTACTAGCATGGCTATACATCATCTACGAGCTA---------------TGG------GCT---GGAGAAGCAAAGGAG---AAAGTCAGC------GAT---GCAAGCGAAGGTACA---CAA---TTC---GCT---TTC---AAA---GCAATG---GCACTTATCCTAACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GAASA-VL------------FWK-LFGASLVMLIAGFLSE---A------E---------------I-DS--IG---D---------GAD------KVL-FAVGVLAWLYIIYEL-----W--A-GEAKE-KVS--D-ASEGT-Q-F-A-F-K-AM-ALILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928290 [unk-env8] PRGD_OTU030_d95a31d328b2f06a03c0cde12a5cdfd8 gb|KJ928290| PRGD_OTU030_d95a31d328b2f06a03c0cde12a5cdfd8, putative proteorhodopsin gene, partial cds. PRGD_OTU030_d95a31d328b2f06a03c0cde12a5cdfd8, putative proteorhodopsin gene, partial cds. KJ928290 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACAGTGCCGCTACAGGTATCTGAATTCTACCTAATTCTAGCAGCAATTGGTGCAGCATCCGCTGTATTGTTCTGGAAGCTATTCGGAGCATCTCTAGTAATGCTAATCGCTGGATTCTTGTCCGAAGCAGAGATTGACAGCATTGGAGATGGAGCAGACAAAGTTCTATTCGCAGTCGGTGTACTAGCATGGCTATACATCATCTACGAGCTATGGGCTGGAGAAGCAAAGGAGAAAGTCAGCGATGCAAGCGAAGGTACACAATTCGCTTTCAAAGCAATGGCAGGTATCCTAACAGTC LITVPLQVSEFYLILAAIGAASAVLFWKLFGASLVMLIAGFLSEAEIDSIGDGADKVLFAVGVLAWLYIIYELWAGEAKEKVSDASEGTQFAFKAMAGILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCGCTACAGGTATCTGAATTCTACCTAATTCTAGCAGCA---------ATT---GGTGCAGCATCCGCT---GTATTG------------------------------------TTCTGGAAG---CTATTCGGAGCATCTCTAGTAATGCTAATCGCTGGATTCTTGTCCGAA---------GCA------------------GAG---------------------------------------------ATT---GACAGC------ATTGGA---------GAT---------------------------GGAGCAGAC------------------AAAGTTCTA---TTCGCAGTCGGTGTACTAGCATGGCTATACATCATCTACGAGCTA---------------TGG------GCT---GGAGAAGCAAAGGAG---AAAGTCAGC------GAT---GCAAGCGAAGGTACA---CAA---TTC---GCT---TTC---AAA---GCAATG---GCAGGTATCCTAACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GAASA-VL------------FWK-LFGASLVMLIAGFLSE---A------E---------------I-DS--IG---D---------GAD------KVL-FAVGVLAWLYIIYEL-----W--A-GEAKE-KVS--D-ASEGT-Q-F-A-F-K-AM-AGILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928282 [unk-env8] PRGD_OTU030_9860ddfb062f4f3d00ffcac0b4447ee7 gb|KJ928282| PRGD_OTU030_9860ddfb062f4f3d00ffcac0b4447ee7, putative proteorhodopsin gene, partial cds. PRGD_OTU030_9860ddfb062f4f3d00ffcac0b4447ee7, putative proteorhodopsin gene, partial cds. KJ928282 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACAGTGCCGCTACAGGTATCTGAATTCTACCTAATTCTAGCAGCAATCGGAGCAGCATCCGCTGTATTGTTCTGGAAGCTATTCGGAGCATCTCTAGTAATGCTAATCGCTGGATTCTTGTCCGAAGCGGACATTGACTCCATCGGAGATGGCGCAGACAAAGCTCTATTCGCAGTCGGTGTACTAGCATGGCTATACATCATCTACGAGCTATGGGCTGGAGAAGCAAAGGAGAAAGTCAGCGATGCAAGCGAAGGTACACAATTCGCTTTCAAAGCAATGGCACTTATCCTAACCGTC LITVPLQVSEFYLILAAIGAASAVLFWKLFGASLVMLIAGFLSEADIDSIGDGADKALFAVGVLAWLYIIYELWAGEAKEKVSDASEGTQFAFKAMALILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCGCTACAGGTATCTGAATTCTACCTAATTCTAGCAGCA---------ATC---GGAGCAGCATCCGCT---GTATTG------------------------------------TTCTGGAAG---CTATTCGGAGCATCTCTAGTAATGCTAATCGCTGGATTCTTGTCCGAA---------GCG------------------GAC---------------------------------------------ATT---GACTCC------ATCGGA---------GAT---------------------------GGCGCAGAC------------------AAAGCTCTA---TTCGCAGTCGGTGTACTAGCATGGCTATACATCATCTACGAGCTA---------------TGG------GCT---GGAGAAGCAAAGGAG---AAAGTCAGC------GAT---GCAAGCGAAGGTACA---CAA---TTC---GCT---TTC---AAA---GCAATG---GCACTTATCCTAACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GAASA-VL------------FWK-LFGASLVMLIAGFLSE---A------D---------------I-DS--IG---D---------GAD------KAL-FAVGVLAWLYIIYEL-----W--A-GEAKE-KVS--D-ASEGT-Q-F-A-F-K-AM-ALILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928283 [unk-env8] PRGD_OTU030_a2390c9327e084e37e1c54cb41fe1bb2 gb|KJ928283| PRGD_OTU030_a2390c9327e084e37e1c54cb41fe1bb2, putative proteorhodopsin gene, partial cds. PRGD_OTU030_a2390c9327e084e37e1c54cb41fe1bb2, putative proteorhodopsin gene, partial cds. KJ928283 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACAGTGCCGCTACAGGTATCTGAATTCTACCTAATTCTAGCAGCAATCGGAGCAGCATCCGCTGTATTGTTCTGGAAGCTATTCGGAGCATCTCTAGTAATGCTAATCGCTGGATTCTTGTCCGAAGCAGACATCGACAGCATTGGAGATGGCGCAGACAAAGCTCTATTCGCAGTCGGTGTACTAGCATGGCTATACATCATCTACGAGCTATGGGCTGGAGAAGCAAAGGAGAAAGTCAGCGATGCAAGCGAAGGTACACAATTCGCTTTCAAAGCAATGGCACTTATCCTAACCGTC LITVPLQVSEFYLILAAIGAASAVLFWKLFGASLVMLIAGFLSEADIDSIGDGADKALFAVGVLAWLYIIYELWAGEAKEKVSDASEGTQFAFKAMALILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCGCTACAGGTATCTGAATTCTACCTAATTCTAGCAGCA---------ATC---GGAGCAGCATCCGCT---GTATTG------------------------------------TTCTGGAAG---CTATTCGGAGCATCTCTAGTAATGCTAATCGCTGGATTCTTGTCCGAA---------GCA------------------GAC---------------------------------------------ATC---GACAGC------ATTGGA---------GAT---------------------------GGCGCAGAC------------------AAAGCTCTA---TTCGCAGTCGGTGTACTAGCATGGCTATACATCATCTACGAGCTA---------------TGG------GCT---GGAGAAGCAAAGGAG---AAAGTCAGC------GAT---GCAAGCGAAGGTACA---CAA---TTC---GCT---TTC---AAA---GCAATG---GCACTTATCCTAACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GAASA-VL------------FWK-LFGASLVMLIAGFLSE---A------D---------------I-DS--IG---D---------GAD------KAL-FAVGVLAWLYIIYEL-----W--A-GEAKE-KVS--D-ASEGT-Q-F-A-F-K-AM-ALILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928275 [unk-env8] PRGD_OTU030_585846bc3f2fe93a0340a5e8daade2ff gb|KJ928275| PRGD_OTU030_585846bc3f2fe93a0340a5e8daade2ff, putative proteorhodopsin gene, partial cds. PRGD_OTU030_585846bc3f2fe93a0340a5e8daade2ff, putative proteorhodopsin gene, partial cds. KJ928275 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) TTGATCACAGTGCCGCTACAGGTATCTGAATTCTACCTAATTCTAGCAGCAATTGGAGCAGCATCTGCTGTATTGTTCTGGAAGCTATTCGGAGCATCTCTAGTAATGCTAATCGCTGGCTTCTTGTCCGAAGCAGACATCGAGAGCATTGGAGATGGAGCTGACAAGGTTCTATTCGCAGTTGGTGTATTAGCATGGCTATACATCATCTACGAGCTATGGGCTGGAGAAGCAAAGGAGAAAGTCAGCGATGCAAGCGAAGGAACACAATTCGCTTTCAAAGCAATGGCAATTATCCTAACCGTC LITVPLQVSEFYLILAAIGAASAVLFWKLFGASLVMLIAGFLSEADIESIGDGADKVLFAVGVLAWLYIIYELWAGEAKEKVSDASEGTQFAFKAMAIILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCGCTACAGGTATCTGAATTCTACCTAATTCTAGCAGCA---------ATT---GGAGCAGCATCTGCT---GTATTG------------------------------------TTCTGGAAG---CTATTCGGAGCATCTCTAGTAATGCTAATCGCTGGCTTCTTGTCCGAA---------GCA------------------GAC---------------------------------------------ATC---GAGAGC------ATTGGA---------GAT---------------------------GGAGCTGAC------------------AAGGTTCTA---TTCGCAGTTGGTGTATTAGCATGGCTATACATCATCTACGAGCTA---------------TGG------GCT---GGAGAAGCAAAGGAG---AAAGTCAGC------GAT---GCAAGCGAAGGAACA---CAA---TTC---GCT---TTC---AAA---GCAATG---GCAATTATCCTAACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GAASA-VL------------FWK-LFGASLVMLIAGFLSE---A------D---------------I-ES--IG---D---------GAD------KVL-FAVGVLAWLYIIYEL-----W--A-GEAKE-KVS--D-ASEGT-Q-F-A-F-K-AM-AIILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928270 [unk-env8] PRGD_OTU030_361016201638d078ec8b8f7d28e51ccf gb|KJ928270| PRGD_OTU030_361016201638d078ec8b8f7d28e51ccf, putative proteorhodopsin gene, partial cds. PRGD_OTU030_361016201638d078ec8b8f7d28e51ccf, putative proteorhodopsin gene, partial cds. KJ928270 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACAGTGCCTCTACAGGTTTCTGAGTTCTACCTAATTCTAGCAGCAATTGGAGCAGCATCTGCTGTATTGTTCTGGAAGCTATTCGGAGCATCTCTGGTAATGCTAGTTGCCGGATTCTTGTCCGAAGCAGACATCGACAGCATTGGAGATGGAGCAGACAAGGCTCTATTCGCAGTTGGTGTATTAGCATGGCTATACATCATCTACGAGCTATGGGCTGGAGAAGCAAAGGAGAAAGTCGGCGATGCAAGCGAAGGAACGCAATTCGCTTTCAAGGCAATGGCAGGTATCCTAACAGTC LITVPLQVSEFYLILAAIGAASAVLFWKLFGASLVMLVAGFLSEADIDSIGDGADKALFAVGVLAWLYIIYELWAGEAKEKVGDASEGTQFAFKAMAGILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCTCTACAGGTTTCTGAGTTCTACCTAATTCTAGCAGCA---------ATT---GGAGCAGCATCTGCT---GTATTG------------------------------------TTCTGGAAG---CTATTCGGAGCATCTCTGGTAATGCTAGTTGCCGGATTCTTGTCCGAA---------GCA------------------GAC---------------------------------------------ATC---GACAGC------ATTGGA---------GAT---------------------------GGAGCAGAC------------------AAGGCTCTA---TTCGCAGTTGGTGTATTAGCATGGCTATACATCATCTACGAGCTA---------------TGG------GCT---GGAGAAGCAAAGGAG---AAAGTCGGC------GAT---GCAAGCGAAGGAACG---CAA---TTC---GCT---TTC---AAG---GCAATG---GCAGGTATCCTAACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GAASA-VL------------FWK-LFGASLVMLVAGFLSE---A------D---------------I-DS--IG---D---------GAD------KAL-FAVGVLAWLYIIYEL-----W--A-GEAKE-KVG--D-ASEGT-Q-F-A-F-K-AM-AGILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928284 [unk-env8] PRGD_OTU030_a63fa722a447809e9a6ce5ca271433e1 gb|KJ928284| PRGD_OTU030_a63fa722a447809e9a6ce5ca271433e1, putative proteorhodopsin gene, partial cds. PRGD_OTU030_a63fa722a447809e9a6ce5ca271433e1, putative proteorhodopsin gene, partial cds. KJ928284 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACAGTGCCTCTACAGGTTTCTGAGTTCTACCTAATTCTAGCAGCAATTGGAGCAGCATCCGCTGTATTGTTCTGGAAGCTATTCGGAGCATCTCTGGTAATGCTAGTTGCCGGATTCTTGTCCGAAGCAGAAATCGATGCTGTTGAAGGAATGGAATACCCATTGTTCGCAATCGGTGTCCTAGCATGGCTATACATCATCTACGAGCTGTGGGCTGGAGAAGCAAAGGAGAAGGTCAGCGATGCAAGCGAAGGAACACAATTCGCTTTCAAAGCAATGGCACTTATCCTAACCGTC LITVPLQVSEFYLILAAIGAASAVLFWKLFGASLVMLVAGFLSEAEIDAVEGMEYPLFAIGVLAWLYIIYELWAGEAKEKVSDASEGTQFAFKAMALILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCTCTACAGGTTTCTGAGTTCTACCTAATTCTAGCAGCA---------ATT---GGAGCAGCATCCGCT---GTATTG------------------------------------TTCTGGAAG---CTATTCGGAGCATCTCTGGTAATGCTAGTTGCCGGATTCTTGTCCGAA---------GCA------------------GAA---------------------------------------------ATC---GATGCT------GTT------------GAA---------------------------GGAATGGAA------------------TACCCATTG---TTCGCAATCGGTGTCCTAGCATGGCTATACATCATCTACGAGCTG---------------TGG------GCT---GGAGAAGCAAAGGAG---AAGGTCAGC------GAT---GCAAGCGAAGGAACA---CAA---TTC---GCT---TTC---AAA---GCAATG---GCACTTATCCTAACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GAASA-VL------------FWK-LFGASLVMLVAGFLSE---A------E---------------I-DA--V----E---------GME------YPL-FAIGVLAWLYIIYEL-----W--A-GEAKE-KVS--D-ASEGT-Q-F-A-F-K-AM-ALILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928287 [unk-env8] PRGD_OTU030_ac234a630b1d3469e8539ba17cf5e6dc gb|KJ928287| PRGD_OTU030_ac234a630b1d3469e8539ba17cf5e6dc, putative proteorhodopsin gene, partial cds. PRGD_OTU030_ac234a630b1d3469e8539ba17cf5e6dc, putative proteorhodopsin gene, partial cds. KJ928287 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), North Pacific Ocean (50.06, -139.53), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) TTGATCACAGTGCCTCTACAGGTTTCTGAGTTCTACCTAATTCTAGCAGCAATTGGAGCAGCATCCGCTGTATTGTTCTGGAAGCTATTCGGAGCATCTCTGGTAATGCTAGTTGCCGGATTCTTGTCCGAAGCAGAAATCGATGCTGTTGAAGGAATGGAATACCCATTGTTCGCAATCGGTGTCCTAGCATGGCTATACATCATCTACGAGCTGTGGGCTGGAGAAGCAAAGGAGAAGGTCAGCGATGCAAGCGAAGGAACACAATTCGCTTTCAAAGCAATGGCAGGTATCCTAACAGTC LITVPLQVSEFYLILAAIGAASAVLFWKLFGASLVMLVAGFLSEAEIDAVEGMEYPLFAIGVLAWLYIIYELWAGEAKEKVSDASEGTQFAFKAMAGILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCTCTACAGGTTTCTGAGTTCTACCTAATTCTAGCAGCA---------ATT---GGAGCAGCATCCGCT---GTATTG------------------------------------TTCTGGAAG---CTATTCGGAGCATCTCTGGTAATGCTAGTTGCCGGATTCTTGTCCGAA---------GCA------------------GAA---------------------------------------------ATC---GATGCT------GTT------------GAA---------------------------GGAATGGAA------------------TACCCATTG---TTCGCAATCGGTGTCCTAGCATGGCTATACATCATCTACGAGCTG---------------TGG------GCT---GGAGAAGCAAAGGAG---AAGGTCAGC------GAT---GCAAGCGAAGGAACA---CAA---TTC---GCT---TTC---AAA---GCAATG---GCAGGTATCCTAACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GAASA-VL------------FWK-LFGASLVMLVAGFLSE---A------E---------------I-DA--V----E---------GME------YPL-FAIGVLAWLYIIYEL-----W--A-GEAKE-KVS--D-ASEGT-Q-F-A-F-K-AM-AGILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928271 [unk-env8] PRGD_OTU030_36a55550e93abdb6095a55fbef87ca6f gb|KJ928271| PRGD_OTU030_36a55550e93abdb6095a55fbef87ca6f, putative proteorhodopsin gene, partial cds. PRGD_OTU030_36a55550e93abdb6095a55fbef87ca6f, putative proteorhodopsin gene, partial cds. KJ928271 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Mediterranean Sea (33.935, 18.508), Indian Ocean (-14.48, 113.45) TTGATCACTGTGCCGCTACAGGTATCTGAGTTCTACCTAATTCTAGCAGCAATTGGTGCAGCATCTGCTGTATTGTTCTGGAAATTGTTCGGAGCATCCATCGTAATGCTCGTTGCTGGATTCTTAGCAGAGTCCAAGGAACTTGATGACGGTTTAACCTACCCGCTATTCGCAATTGGTGTCTTAGCATGGCTATACATCATTTACGAGCTATGGGCTGGTGAAGCAAAGGAAAAGGTCAGCGATGCAAGCGAAGGAACACAATTCGCTTTCAAAGCAATGGCAATTATCCTAACCGTT LITVPLQVSEFYLILAAIGAASAVLFWKLFGASIVMLVAGFLAESKELDDGLTYPLFAIGVLAWLYIIYELWAGEAKEKVSDASEGTQFAFKAMAIILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCGCTACAGGTATCTGAGTTCTACCTAATTCTAGCAGCA---------ATT---GGTGCAGCATCTGCT---GTATTG------------------------------------TTCTGGAAA---TTGTTCGGAGCATCCATCGTAATGCTCGTTGCTGGATTCTTAGCAGAG---------TCC------------------AAG---------------------------------------------------GAACTT------GAT------------GAC---------------------------GGTTTAACC------------------TACCCGCTA---TTCGCAATTGGTGTCTTAGCATGGCTATACATCATTTACGAGCTA---------------TGG------GCT---GGTGAAGCAAAGGAA---AAGGTCAGC------GAT---GCAAGCGAAGGAACA---CAA---TTC---GCT---TTC---AAA---GCAATG---GCAATTATCCTAACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GAASA-VL------------FWK-LFGASIVMLVAGFLAE---S------K-----------------EL--D----D---------GLT------YPL-FAIGVLAWLYIIYEL-----W--A-GEAKE-KVS--D-ASEGT-Q-F-A-F-K-AM-AIILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928286 [unk-env8] PRGD_OTU030_ac0c064ecd025c8be77c61587deabd06 gb|KJ928286| PRGD_OTU030_ac0c064ecd025c8be77c61587deabd06, putative proteorhodopsin gene, partial cds. PRGD_OTU030_ac0c064ecd025c8be77c61587deabd06, putative proteorhodopsin gene, partial cds. KJ928286 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), Indian Ocean (-14.48, 113.45) TTGATCACTGTGCCGCTACAGGTATCTGAGTTCTACCTAATTCTAGCAGCAATTGGTGCAGCATCTGCTGTATTGTTCTGGAAGTTGTTCGGAGCATCCATTGTAATGCTCGTTGCTGGATTCTTAGCAGAGTCCAAGGAACTTGATGACGGTTTAACCTACCCGCTATTCGCAATTGGTGTCTTAGCATGGCTATACATCATTTACGAGCTATGGGCTGGTGAAGCAAAGGAAAAGGTCAGCGATGCAAGCGAAGGAACACAATTCGCTTTCAAAGCAATGGCAATTATCCTAACCGTT LITVPLQVSEFYLILAAIGAASAVLFWKLFGASIVMLVAGFLAESKELDDGLTYPLFAIGVLAWLYIIYELWAGEAKEKVSDASEGTQFAFKAMAIILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCGCTACAGGTATCTGAGTTCTACCTAATTCTAGCAGCA---------ATT---GGTGCAGCATCTGCT---GTATTG------------------------------------TTCTGGAAG---TTGTTCGGAGCATCCATTGTAATGCTCGTTGCTGGATTCTTAGCAGAG---------TCC------------------AAG---------------------------------------------------GAACTT------GAT------------GAC---------------------------GGTTTAACC------------------TACCCGCTA---TTCGCAATTGGTGTCTTAGCATGGCTATACATCATTTACGAGCTA---------------TGG------GCT---GGTGAAGCAAAGGAA---AAGGTCAGC------GAT---GCAAGCGAAGGAACA---CAA---TTC---GCT---TTC---AAA---GCAATG---GCAATTATCCTAACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GAASA-VL------------FWK-LFGASIVMLVAGFLAE---S------K-----------------EL--D----D---------GLT------YPL-FAIGVLAWLYIIYEL-----W--A-GEAKE-KVS--D-ASEGT-Q-F-A-F-K-AM-AIILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928288 [unk-env8] PRGD_OTU030_b50c51a92bfa1ac48a18c5068dc7258a gb|KJ928288| PRGD_OTU030_b50c51a92bfa1ac48a18c5068dc7258a, putative proteorhodopsin gene, partial cds. PRGD_OTU030_b50c51a92bfa1ac48a18c5068dc7258a, putative proteorhodopsin gene, partial cds. KJ928288 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637) TTGATCACTGTGCCGCTACAGGTATCTGAGTTCTACCTAATTCTAGCAGCAATTGGTGCAGCATCTGCTGTATTGTTCTGGAAATTGTTCGGAGCATCCATCGTAATGCTCGTTGCTGGATTCTTAGCAGAGTCCAAGGAACTTGATGACAGTTTAACCTACCCGCTATTCGCAATTGGTGTCTTAGCATGGCTATACATCATTTACGAGCTATGGGCTGGTGAAGCAAAAGAAAAGGTCAGCGATGCAAGCGAAGGAACACAATTCGCTTTCAAAGCAATGGCAGGTATCCTAACAGTC LITVPLQVSEFYLILAAIGAASAVLFWKLFGASIVMLVAGFLAESKELDDSLTYPLFAIGVLAWLYIIYELWAGEAKEKVSDASEGTQFAFKAMAGILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCGCTACAGGTATCTGAGTTCTACCTAATTCTAGCAGCA---------ATT---GGTGCAGCATCTGCT---GTATTG------------------------------------TTCTGGAAA---TTGTTCGGAGCATCCATCGTAATGCTCGTTGCTGGATTCTTAGCAGAG---------TCC------------------AAG---------------------------------------------------GAACTT------GAT------------GAC---------------------------AGTTTAACC------------------TACCCGCTA---TTCGCAATTGGTGTCTTAGCATGGCTATACATCATTTACGAGCTA---------------TGG------GCT---GGTGAAGCAAAAGAA---AAGGTCAGC------GAT---GCAAGCGAAGGAACA---CAA---TTC---GCT---TTC---AAA---GCAATG---GCAGGTATCCTAACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GAASA-VL------------FWK-LFGASIVMLVAGFLAE---S------K-----------------EL--D----D---------SLT------YPL-FAIGVLAWLYIIYEL-----W--A-GEAKE-KVS--D-ASEGT-Q-F-A-F-K-AM-AGILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928267 [unk-env8] PRGD_OTU030_otuREP_f576f06ad21b5b0b26e9b832a72e5f6e gb|KJ928267| PRGD_OTU030_otuREP_f576f06ad21b5b0b26e9b832a72e5f6e, putative proteorhodopsin gene, partial cds. PRGD_OTU030_otuREP_f576f06ad21b5b0b26e9b832a72e5f6e, putative proteorhodopsin gene, partial cds. KJ928267 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) TTGATCACTGTGCCGCTACAGGTATCTGAGTTCTACCTAATTCTAGCAGCAATTGGTGCAGCATCTGCTGTATTGTTCTGGAAATTGTTCGGAGCATCCATCGTAATGCTCGTTGCTGGATTCTTAGCAGAGTCCAAGGAACTTGATGACAGTTTAACCTACCCGCTATTCGCAATTGGTGTCTTAGCATGGCTATACATCATTTACGAGCTATGGGCTGGTGAAGCAAAAGAAAAGGTCAGCGATGCAAGCGAAGGAACACAATTCGCTTTCAAAGCAATGGCAATTATCCTAACCGTT LITVPLQVSEFYLILAAIGAASAVLFWKLFGASIVMLVAGFLAESKELDDSLTYPLFAIGVLAWLYIIYELWAGEAKEKVSDASEGTQFAFKAMAIILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCGCTACAGGTATCTGAGTTCTACCTAATTCTAGCAGCA---------ATT---GGTGCAGCATCTGCT---GTATTG------------------------------------TTCTGGAAA---TTGTTCGGAGCATCCATCGTAATGCTCGTTGCTGGATTCTTAGCAGAG---------TCC------------------AAG---------------------------------------------------GAACTT------GAT------------GAC---------------------------AGTTTAACC------------------TACCCGCTA---TTCGCAATTGGTGTCTTAGCATGGCTATACATCATTTACGAGCTA---------------TGG------GCT---GGTGAAGCAAAAGAA---AAGGTCAGC------GAT---GCAAGCGAAGGAACA---CAA---TTC---GCT---TTC---AAA---GCAATG---GCAATTATCCTAACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GAASA-VL------------FWK-LFGASIVMLVAGFLAE---S------K-----------------EL--D----D---------SLT------YPL-FAIGVLAWLYIIYEL-----W--A-GEAKE-KVS--D-ASEGT-Q-F-A-F-K-AM-AIILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928269 [unk-env8] PRGD_OTU030_35d13a260c05584fd46baf1154bc2d57 gb|KJ928269| PRGD_OTU030_35d13a260c05584fd46baf1154bc2d57, putative proteorhodopsin gene, partial cds. PRGD_OTU030_35d13a260c05584fd46baf1154bc2d57, putative proteorhodopsin gene, partial cds. KJ928269 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), Arctic Ocean-Atlantic side (76.3333, 14.8833) TTGATCACTGTGCCACTTCAGGTATCTGAGTTCTACCTAATTCTAGCAGCAATTGGTGCAGCGTCTGCTGTATTGTTCTGGAAGTTGTTCGGAGCGTCCATCGTTATGCTAGTTGCTGGATTCCTAGCAGAATCTGGAGAACTTGATGACGGTTTAACCTACCCGCTATTCGCAGTTGGTGTCTTAGCATGGCTATACATCATTTACGAGCTATGGGCTGGTGAAGCAAAGGAAAAGGTCAGCGATGCAAGCGAAGGAACACAATTCGCTTTCAAAGCAATGGCAATTATCCTAACCGTT LITVPLQVSEFYLILAAIGAASAVLFWKLFGASIVMLVAGFLAESGELDDGLTYPLFAVGVLAWLYIIYELWAGEAKEKVSDASEGTQFAFKAMAIILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCACTTCAGGTATCTGAGTTCTACCTAATTCTAGCAGCA---------ATT---GGTGCAGCGTCTGCT---GTATTG------------------------------------TTCTGGAAG---TTGTTCGGAGCGTCCATCGTTATGCTAGTTGCTGGATTCCTAGCAGAA---------TCT------------------GGA---------------------------------------------------GAACTT------GAT------------GAC---------------------------GGTTTAACC------------------TACCCGCTA---TTCGCAGTTGGTGTCTTAGCATGGCTATACATCATTTACGAGCTA---------------TGG------GCT---GGTGAAGCAAAGGAA---AAGGTCAGC------GAT---GCAAGCGAAGGAACA---CAA---TTC---GCT---TTC---AAA---GCAATG---GCAATTATCCTAACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GAASA-VL------------FWK-LFGASIVMLVAGFLAE---S------G-----------------EL--D----D---------GLT------YPL-FAVGVLAWLYIIYEL-----W--A-GEAKE-KVS--D-ASEGT-Q-F-A-F-K-AM-AIILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928278 [unk-env8] PRGD_OTU030_7a6033a00817057715873eec0d53456d gb|KJ928278| PRGD_OTU030_7a6033a00817057715873eec0d53456d, putative proteorhodopsin gene, partial cds. PRGD_OTU030_7a6033a00817057715873eec0d53456d, putative proteorhodopsin gene, partial cds. KJ928278 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACAGTACCTCTACAGGTATCTGAGTTCTACCTAATCCTAGCAGCAATCGGCGCAGCATCTGCTGTACTGTTCTGGAAGCTTTTCGGAGCATCCATCGTTATGCTAGTTGCTGGATTCTTGTCTGAAGCAGACATCGATGCAGTCGATGGAATGGAGTGGCCTCTGTTCATCGTTGGATGTCTAGCATGGGCATACATCATCTACGAACTATGGATTGGAGAAGCAAAGGAGAAGGTCGGAGAAGCAAGCGAAGGTACACAATTCGCTTTCAAAGCAATGGCTGTTATCCTAACAATC LITVPLQVSEFYLILAAIGAASAVLFWKLFGASIVMLVAGFLSEADIDAVDGMEWPLFIVGCLAWAYIIYELWIGEAKEKVGEASEGTQFAFKAMAVILTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTACCTCTACAGGTATCTGAGTTCTACCTAATCCTAGCAGCA---------ATC---GGCGCAGCATCTGCT---GTACTG------------------------------------TTCTGGAAG---CTTTTCGGAGCATCCATCGTTATGCTAGTTGCTGGATTCTTGTCTGAA---------GCA------------------GAC---------------------------------------------ATC---GATGCA------GTC------------GAT---------------------------GGAATGGAG------------------TGGCCTCTG---TTCATCGTTGGATGTCTAGCATGGGCATACATCATCTACGAACTA---------------TGG------ATT---GGAGAAGCAAAGGAG---AAGGTCGGA------GAA---GCAAGCGAAGGTACA---CAA---TTC---GCT---TTC---AAA---GCAATG---GCTGTTATCCTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GAASA-VL------------FWK-LFGASIVMLVAGFLSE---A------D---------------I-DA--V----D---------GME------WPL-FIVGCLAWAYIIYEL-----W--I-GEAKE-KVG--E-ASEGT-Q-F-A-F-K-AM-AVILTI-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928295 [unk-env8] PRGD_OTU030_fda1383d1d6dd8e123f5905a97d8152c gb|KJ928295| PRGD_OTU030_fda1383d1d6dd8e123f5905a97d8152c, putative proteorhodopsin gene, partial cds. PRGD_OTU030_fda1383d1d6dd8e123f5905a97d8152c, putative proteorhodopsin gene, partial cds. KJ928295 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTGATCACAGTACCTCTACAGGTATCTGAGTTCTACCTAATTCTAGCAGCAATCGGTGCAGCATCTGCTGTACTGTTCTGGAAGCTTTTCGGAGCATCCATCGTTATGCTAGTTGCTGGATTCTTGTCTGAAGCAGACATCGATGCAGTCGATGGAATGGAGTGGCCTCTGTTCATCGTAGGATGTCTAGCATGGGCTTACATCATCTACGAACTATGGATTGGAGAAGCAAAGGAGAAGGTCGGAGAAGCAAGCGAAGGTACACAATTCGCTTTCAAAGCAATGGCTGTTATCCTAACAATC LITVPLQVSEFYLILAAIGAASAVLFWKLFGASIVMLVAGFLSEADIDAVDGMEWPLFIVGCLAWAYIIYELWIGEAKEKVGEASEGTQFAFKAMAVILTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTACCTCTACAGGTATCTGAGTTCTACCTAATTCTAGCAGCA---------ATC---GGTGCAGCATCTGCT---GTACTG------------------------------------TTCTGGAAG---CTTTTCGGAGCATCCATCGTTATGCTAGTTGCTGGATTCTTGTCTGAA---------GCA------------------GAC---------------------------------------------ATC---GATGCA------GTC------------GAT---------------------------GGAATGGAG------------------TGGCCTCTG---TTCATCGTAGGATGTCTAGCATGGGCTTACATCATCTACGAACTA---------------TGG------ATT---GGAGAAGCAAAGGAG---AAGGTCGGA------GAA---GCAAGCGAAGGTACA---CAA---TTC---GCT---TTC---AAA---GCAATG---GCTGTTATCCTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GAASA-VL------------FWK-LFGASIVMLVAGFLSE---A------D---------------I-DA--V----D---------GME------WPL-FIVGCLAWAYIIYEL-----W--I-GEAKE-KVG--E-ASEGT-Q-F-A-F-K-AM-AVILTI-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928280 [unk-env8] PRGD_OTU030_918dc003075d90ce6c792eb11b549b8c gb|KJ928280| PRGD_OTU030_918dc003075d90ce6c792eb11b549b8c, putative proteorhodopsin gene, partial cds. PRGD_OTU030_918dc003075d90ce6c792eb11b549b8c, putative proteorhodopsin gene, partial cds. KJ928280 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (33.935, 18.508), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) TTGATCACAGTACCTCTACAGGTATCTGAGTTCTACCTAATTCTAGCAGCAATCGGTGCAGCATCTGCTGTACTATTCTGGAAGCTTTTCGGAGCATCCATCGTTATGCTAGTTGCTGGATTCTTGTCTGAAGCAGACATCGATGCAGTCGATGGAATGGAGTGGCCTCTGTTCATCGTTGGATGTCTAGCATGGGCATACATCATCTACGAACTATGGATCGGAGAAGCAAAGGAGAAGGTCGGAGAAGCAAGCGAAGGTACACAGTTCGCTTTCAAGGCAATGGCTGTTATCCTAACAATC LITVPLQVSEFYLILAAIGAASAVLFWKLFGASIVMLVAGFLSEADIDAVDGMEWPLFIVGCLAWAYIIYELWIGEAKEKVGEASEGTQFAFKAMAVILTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTACCTCTACAGGTATCTGAGTTCTACCTAATTCTAGCAGCA---------ATC---GGTGCAGCATCTGCT---GTACTA------------------------------------TTCTGGAAG---CTTTTCGGAGCATCCATCGTTATGCTAGTTGCTGGATTCTTGTCTGAA---------GCA------------------GAC---------------------------------------------ATC---GATGCA------GTC------------GAT---------------------------GGAATGGAG------------------TGGCCTCTG---TTCATCGTTGGATGTCTAGCATGGGCATACATCATCTACGAACTA---------------TGG------ATC---GGAGAAGCAAAGGAG---AAGGTCGGA------GAA---GCAAGCGAAGGTACA---CAG---TTC---GCT---TTC---AAG---GCAATG---GCTGTTATCCTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GAASA-VL------------FWK-LFGASIVMLVAGFLSE---A------D---------------I-DA--V----D---------GME------WPL-FIVGCLAWAYIIYEL-----W--I-GEAKE-KVG--E-ASEGT-Q-F-A-F-K-AM-AVILTI-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928281 [unk-env8] PRGD_OTU030_9649bfe7d7bd7c731ee94d5205d1a6db gb|KJ928281| PRGD_OTU030_9649bfe7d7bd7c731ee94d5205d1a6db, putative proteorhodopsin gene, partial cds. PRGD_OTU030_9649bfe7d7bd7c731ee94d5205d1a6db, putative proteorhodopsin gene, partial cds. KJ928281 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTGATCACAGTACCTCTACAGGTATCTGAGTTCTACCTAATTCTAGCAGCAATCGGTGCAGCATCTGCTGTACTATTCTGGAAGCTTTTCGGAGCATCCATCGTTATGCTAGTTGCTGGATTCTTGTCTGAATCAGAAATCGATGCAGTTGATGGAATGGAGTGGCCTCTGTTTATCGTAGGAGTCCTAGCATGGGCTTACATCATCTACGAACTATGGATCGGAGAAGCAAAGGAGAAGGTCGGAGAAGCAAGCGAAGGTACACAGTTCGCTTTCAAGGCAATGGCTGTTATCCTAACAATC LITVPLQVSEFYLILAAIGAASAVLFWKLFGASIVMLVAGFLSESEIDAVDGMEWPLFIVGVLAWAYIIYELWIGEAKEKVGEASEGTQFAFKAMAVILTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTACCTCTACAGGTATCTGAGTTCTACCTAATTCTAGCAGCA---------ATC---GGTGCAGCATCTGCT---GTACTA------------------------------------TTCTGGAAG---CTTTTCGGAGCATCCATCGTTATGCTAGTTGCTGGATTCTTGTCTGAA---------TCA------------------GAA---------------------------------------------ATC---GATGCA------GTT------------GAT---------------------------GGAATGGAG------------------TGGCCTCTG---TTTATCGTAGGAGTCCTAGCATGGGCTTACATCATCTACGAACTA---------------TGG------ATC---GGAGAAGCAAAGGAG---AAGGTCGGA------GAA---GCAAGCGAAGGTACA---CAG---TTC---GCT---TTC---AAG---GCAATG---GCTGTTATCCTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GAASA-VL------------FWK-LFGASIVMLVAGFLSE---S------E---------------I-DA--V----D---------GME------WPL-FIVGVLAWAYIIYEL-----W--I-GEAKE-KVG--E-ASEGT-Q-F-A-F-K-AM-AVILTI-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928273 [unk-env8] PRGD_OTU030_4ccd086b1f3fddf15fdc1fbc17693b49 gb|KJ928273| PRGD_OTU030_4ccd086b1f3fddf15fdc1fbc17693b49, putative proteorhodopsin gene, partial cds. PRGD_OTU030_4ccd086b1f3fddf15fdc1fbc17693b49, putative proteorhodopsin gene, partial cds. KJ928273 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTGATCACAGTACCTCTACAGGTATCTGAGTTCTACCTAATTCTAGCAGCAATCGGTGCAGCGTCTGCTGTGCTATTCTGGAAGCTTTTCGGAGCATCCATTGTTATGCTAGTTGCTGGATTCTTGTCTGAGTCCAGTATCGACGCAGTTGAAGGAATGGAAACACCACTGTTCGCAATCGGTGTACTAGCATGGCTATACATCATCTACGAACTGTGGGCTGGAGAAGCAAAGGAGAAGGTCAGCGACGCAAGCGAAGGTACACAATTCGCTTTCAAGGCTATGGCTGGAATCCTAACAGTC LITVPLQVSEFYLILAAIGAASAVLFWKLFGASIVMLVAGFLSESSIDAVEGMETPLFAIGVLAWLYIIYELWAGEAKEKVSDASEGTQFAFKAMAGILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTACCTCTACAGGTATCTGAGTTCTACCTAATTCTAGCAGCA---------ATC---GGTGCAGCGTCTGCT---GTGCTA------------------------------------TTCTGGAAG---CTTTTCGGAGCATCCATTGTTATGCTAGTTGCTGGATTCTTGTCTGAG---------TCC------------------AGT---------------------------------------------ATC---GACGCA------GTT------------GAA---------------------------GGAATGGAA------------------ACACCACTG---TTCGCAATCGGTGTACTAGCATGGCTATACATCATCTACGAACTG---------------TGG------GCT---GGAGAAGCAAAGGAG---AAGGTCAGC------GAC---GCAAGCGAAGGTACA---CAA---TTC---GCT---TTC---AAG---GCTATG---GCTGGAATCCTAACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GAASA-VL------------FWK-LFGASIVMLVAGFLSE---S------S---------------I-DA--V----E---------GME------TPL-FAIGVLAWLYIIYEL-----W--A-GEAKE-KVS--D-ASEGT-Q-F-A-F-K-AM-AGILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928276 [unk-env8] PRGD_OTU030_620e633089be1647d045cfd90773a917 gb|KJ928276| PRGD_OTU030_620e633089be1647d045cfd90773a917, putative proteorhodopsin gene, partial cds. PRGD_OTU030_620e633089be1647d045cfd90773a917, putative proteorhodopsin gene, partial cds. KJ928276 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATCACAGTACCTCTACAGGTATCTGAGTTCTACCTAATTCTAGCAGCAATTGGTGCAGCATCTGCTGTGCTATTCTGGAAGCTTTTCGGAGCATCCATTGTTATGCTAGTTGCTGGATTCTTGTCTGAGTCCAGTATCGAGGCAGTTGATGGAATGGAAACACCACTGTTCGCAATCGGTGTACTAGCATGGCTATACATCATCTACGAACTGTGGGCTGGAGAAGCAAAGGAAAAGGTCAGCGACGCAAGCGAAGGTACACAATTCGCTTTCAAGGCTATGGCTGGAATCCTAACAGTC LITVPLQVSEFYLILAAIGAASAVLFWKLFGASIVMLVAGFLSESSIEAVDGMETPLFAIGVLAWLYIIYELWAGEAKEKVSDASEGTQFAFKAMAGILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTACCTCTACAGGTATCTGAGTTCTACCTAATTCTAGCAGCA---------ATT---GGTGCAGCATCTGCT---GTGCTA------------------------------------TTCTGGAAG---CTTTTCGGAGCATCCATTGTTATGCTAGTTGCTGGATTCTTGTCTGAG---------TCC------------------AGT---------------------------------------------ATC---GAGGCA------GTT------------GAT---------------------------GGAATGGAA------------------ACACCACTG---TTCGCAATCGGTGTACTAGCATGGCTATACATCATCTACGAACTG---------------TGG------GCT---GGAGAAGCAAAGGAA---AAGGTCAGC------GAC---GCAAGCGAAGGTACA---CAA---TTC---GCT---TTC---AAG---GCTATG---GCTGGAATCCTAACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GAASA-VL------------FWK-LFGASIVMLVAGFLSE---S------S---------------I-EA--V----D---------GME------TPL-FAIGVLAWLYIIYEL-----W--A-GEAKE-KVS--D-ASEGT-Q-F-A-F-K-AM-AGILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928291 [unk-env8] PRGD_OTU030_da7d2628395d1d35234c50577143a8f0 gb|KJ928291| PRGD_OTU030_da7d2628395d1d35234c50577143a8f0, putative proteorhodopsin gene, partial cds. PRGD_OTU030_da7d2628395d1d35234c50577143a8f0, putative proteorhodopsin gene, partial cds. KJ928291 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTGATCACAGTACCTCTACAGGTATCTGAGTTCTACCTAATTCTAGCAGCAATTGGTGCAGCTTCTGCTGTGCTGTTCTGGAAGCTTTTCGGAGCATCCATTGTTATGCTAGTTGCTGGATTCTTGTCTGAGTCCAGTATCGAGGCAGTTGATGGAATGGAAACACCACTGTTCGCAATCGGTGTACTAGCATGGCTATACATCATCTACGAACTATGGGCTGGAGAAGCAAAGGAAAAGGTCAGCGACGCAAGCGAAGGTACACAATTCGCTTTCAAGGCTATGGCTGGAATCCTAACAGTC LITVPLQVSEFYLILAAIGAASAVLFWKLFGASIVMLVAGFLSESSIEAVDGMETPLFAIGVLAWLYIIYELWAGEAKEKVSDASEGTQFAFKAMAGILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTACCTCTACAGGTATCTGAGTTCTACCTAATTCTAGCAGCA---------ATT---GGTGCAGCTTCTGCT---GTGCTG------------------------------------TTCTGGAAG---CTTTTCGGAGCATCCATTGTTATGCTAGTTGCTGGATTCTTGTCTGAG---------TCC------------------AGT---------------------------------------------ATC---GAGGCA------GTT------------GAT---------------------------GGAATGGAA------------------ACACCACTG---TTCGCAATCGGTGTACTAGCATGGCTATACATCATCTACGAACTA---------------TGG------GCT---GGAGAAGCAAAGGAA---AAGGTCAGC------GAC---GCAAGCGAAGGTACA---CAA---TTC---GCT---TTC---AAG---GCTATG---GCTGGAATCCTAACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GAASA-VL------------FWK-LFGASIVMLVAGFLSE---S------S---------------I-EA--V----D---------GME------TPL-FAIGVLAWLYIIYEL-----W--A-GEAKE-KVS--D-ASEGT-Q-F-A-F-K-AM-AGILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928289 [unk-env8] PRGD_OTU030_d25dc64f42f384c4c4c9cb969286dc5f gb|KJ928289| PRGD_OTU030_d25dc64f42f384c4c4c9cb969286dc5f, putative proteorhodopsin gene, partial cds. PRGD_OTU030_d25dc64f42f384c4c4c9cb969286dc5f, putative proteorhodopsin gene, partial cds. KJ928289 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACTGTGCCACTACAGGTATCTGAGTTCTACCTAATCCTTGCAGCAATCGGTGCAGCATCCGCTGTACTATTCTGGAAGCTATTCGGTGCATCCATTGTTATGCTAGTAGCAGGTTTCCTATCCGAAGCAGATATCGATGCTGTTAAGGATATGGAGTACCCACTATTCGCAATCGGTGTACTAGCTTGGCTATACATCATCTACGAACTATGGGCTGGAGAAGCAAAGGAAAAAGTCGGAGACGCAAGCGAAGGTACACAATTTGCTTTCAAGGCAATGGCTGGTATCCTAACAGTC LITVPLQVSEFYLILAAIGAASAVLFWKLFGASIVMLVAGFLSEADIDAVKDMEYPLFAIGVLAWLYIIYELWAGEAKEKVGDASEGTQFAFKAMAGILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCACTACAGGTATCTGAGTTCTACCTAATCCTTGCAGCA---------ATC---GGTGCAGCATCCGCT---GTACTA------------------------------------TTCTGGAAG---CTATTCGGTGCATCCATTGTTATGCTAGTAGCAGGTTTCCTATCCGAA---------GCA------------------GAT---------------------------------------------ATC---GATGCT------GTT------------AAG---------------------------GATATGGAG------------------TACCCACTA---TTCGCAATCGGTGTACTAGCTTGGCTATACATCATCTACGAACTA---------------TGG------GCT---GGAGAAGCAAAGGAA---AAAGTCGGA------GAC---GCAAGCGAAGGTACA---CAA---TTT---GCT---TTC---AAG---GCAATG---GCTGGTATCCTAACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GAASA-VL------------FWK-LFGASIVMLVAGFLSE---A------D---------------I-DA--V----K---------DME------YPL-FAIGVLAWLYIIYEL-----W--A-GEAKE-KVG--D-ASEGT-Q-F-A-F-K-AM-AGILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928294 [unk-env8] PRGD_OTU030_efe7ffd4f41ee388c017df41d9597ed8 gb|KJ928294| PRGD_OTU030_efe7ffd4f41ee388c017df41d9597ed8, putative proteorhodopsin gene, partial cds. PRGD_OTU030_efe7ffd4f41ee388c017df41d9597ed8, putative proteorhodopsin gene, partial cds. KJ928294 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTGATCACAGTACCTCTACAGGTATCTGAGTTCTACCTAATCCTTGCAGCAATCGGTGCAGCATCCGCTGTACTATTCTGGAAGCTATTCGGTGCATCCATTGTTATGCTAGTAGCTGGTTTCCTATCCGAAGCAGAAATCGATGCTGTTGAAGGAATGGAGTACCCACTATTCGCAATCGGTGTACTAGCTTGGCTATACATCATCTACGAACTATGGGCTGGAGAAGCAAAGGAAAAAGTCGGCGACGCAAGCGAAGGTACACAATTCGCTTTCAAAGCAATGGCTGGTATCCTAACAGTC LITVPLQVSEFYLILAAIGAASAVLFWKLFGASIVMLVAGFLSEAEIDAVEGMEYPLFAIGVLAWLYIIYELWAGEAKEKVGDASEGTQFAFKAMAGILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTACCTCTACAGGTATCTGAGTTCTACCTAATCCTTGCAGCA---------ATC---GGTGCAGCATCCGCT---GTACTA------------------------------------TTCTGGAAG---CTATTCGGTGCATCCATTGTTATGCTAGTAGCTGGTTTCCTATCCGAA---------GCA------------------GAA---------------------------------------------ATC---GATGCT------GTT------------GAA---------------------------GGAATGGAG------------------TACCCACTA---TTCGCAATCGGTGTACTAGCTTGGCTATACATCATCTACGAACTA---------------TGG------GCT---GGAGAAGCAAAGGAA---AAAGTCGGC------GAC---GCAAGCGAAGGTACA---CAA---TTC---GCT---TTC---AAA---GCAATG---GCTGGTATCCTAACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GAASA-VL------------FWK-LFGASIVMLVAGFLSE---A------E---------------I-DA--V----E---------GME------YPL-FAIGVLAWLYIIYEL-----W--A-GEAKE-KVG--D-ASEGT-Q-F-A-F-K-AM-AGILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928292 [unk-env8] PRGD_OTU030_e73631727fa338dffc3345d21ee4d99e gb|KJ928292| PRGD_OTU030_e73631727fa338dffc3345d21ee4d99e, putative proteorhodopsin gene, partial cds. PRGD_OTU030_e73631727fa338dffc3345d21ee4d99e, putative proteorhodopsin gene, partial cds. KJ928292 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683) TTGATCACAGTACCTCTGCAGGTATCTGAGTTCTACCTAATCCTTGCAGCAATCGGCGCAGCATCCGCTGTACTATTCTGGAAGCTATTCGGTGCATCCATTATCATGCTAGTAGCAGGTTTCCTATCCGAAGCAGACATCGAAGCTGTTGAGGGGGCGGAGTACCCACTATTCGCAATCGGTGTACTAGCATGGCTATACATCATCTACGAGCTATGGGCTGGAGAAGCAAAGGAAAAGGTCGGAGACGCAAGCGAAGGTACACAATTCGCTTTCAAGTCGATGGCAATCATCCTAACAGTC LITVPLQVSEFYLILAAIGAASAVLFWKLFGASIIMLVAGFLSEADIEAVEGAEYPLFAIGVLAWLYIIYELWAGEAKEKVGDASEGTQFAFKSMAIILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTACCTCTGCAGGTATCTGAGTTCTACCTAATCCTTGCAGCA---------ATC---GGCGCAGCATCCGCT---GTACTA------------------------------------TTCTGGAAG---CTATTCGGTGCATCCATTATCATGCTAGTAGCAGGTTTCCTATCCGAA---------GCA------------------GAC---------------------------------------------ATC---GAAGCT------GTT------------GAG---------------------------GGGGCGGAG------------------TACCCACTA---TTCGCAATCGGTGTACTAGCATGGCTATACATCATCTACGAGCTA---------------TGG------GCT---GGAGAAGCAAAGGAA---AAGGTCGGA------GAC---GCAAGCGAAGGTACA---CAA---TTC---GCT---TTC---AAG---TCGATG---GCAATCATCCTAACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GAASA-VL------------FWK-LFGASIIMLVAGFLSE---A------D---------------I-EA--V----E---------GAE------YPL-FAIGVLAWLYIIYEL-----W--A-GEAKE-KVG--D-ASEGT-Q-F-A-F-K-SM-AIILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928268 [unk-env8] PRGD_OTU030_2ab833604b0b8df06bb049815930ca97 gb|KJ928268| PRGD_OTU030_2ab833604b0b8df06bb049815930ca97, putative proteorhodopsin gene, partial cds. PRGD_OTU030_2ab833604b0b8df06bb049815930ca97, putative proteorhodopsin gene, partial cds. KJ928268 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACAGTGCCGCTACAGGTATCTGAATTCTACCTAATCCTTGCAGCAATTGGTGCAGCATCTGCTGTATTGTTCTGGAAGTTATTCGGTGCATCAATCATCATGCTAGTTGCCGGATTCCTATCGGAATCAAGCATTGACGCTGTTGATAAAATGGAATACCCATTGTTCGCAATCGGTGTTCTAGCATGGCTATACATCATCTACGAGCTATGGGCTGGAGAAGCAAAGGAGAAAGTCGGCGATGCAAGCGAAGGAACACAATTCGCTTTCAAGGCAATGGCTGGTATCCTAACAGTC LITVPLQVSEFYLILAAIGAASAVLFWKLFGASIIMLVAGFLSESSIDAVDKMEYPLFAIGVLAWLYIIYELWAGEAKEKVGDASEGTQFAFKAMAGILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCGCTACAGGTATCTGAATTCTACCTAATCCTTGCAGCA---------ATT---GGTGCAGCATCTGCT---GTATTG------------------------------------TTCTGGAAG---TTATTCGGTGCATCAATCATCATGCTAGTTGCCGGATTCCTATCGGAA---------TCA------------------AGC---------------------------------------------ATT---GACGCT------GTT------------GAT---------------------------AAAATGGAA------------------TACCCATTG---TTCGCAATCGGTGTTCTAGCATGGCTATACATCATCTACGAGCTA---------------TGG------GCT---GGAGAAGCAAAGGAG---AAAGTCGGC------GAT---GCAAGCGAAGGAACA---CAA---TTC---GCT---TTC---AAG---GCAATG---GCTGGTATCCTAACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GAASA-VL------------FWK-LFGASIIMLVAGFLSE---S------S---------------I-DA--V----D---------KME------YPL-FAIGVLAWLYIIYEL-----W--A-GEAKE-KVG--D-ASEGT-Q-F-A-F-K-AM-AGILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928293 [unk-env8] PRGD_OTU030_e824d6aee4876284d85064ad4a1efb63 gb|KJ928293| PRGD_OTU030_e824d6aee4876284d85064ad4a1efb63, putative proteorhodopsin gene, partial cds. PRGD_OTU030_e824d6aee4876284d85064ad4a1efb63, putative proteorhodopsin gene, partial cds. KJ928293 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097) TTGATCACAGTGCCATTGCAGGTTTCTGAATTCTACCTAATCCTTGCAGCAATTGGTGCAGCATCTGCTGTATTGTTCTGGAAGTTATTCGGTGCATCAATCATCATGCTAGTTGCCGGATTCCTATCGGAATCAAGCATTGACGCTGTTGATAAAATGGAATACCCATTGTTCGCAATCGGTGTTCTAGCATGGCTATACATCATCTACGAGCTATGGGCTGGAGAAGCAAAGGAGAAAGTCGGCGATGCAAGCGAAGGAACACAATTCGCTTTCAAGGCAATGGCTGGTATCCTAACAGTC LITVPLQVSEFYLILAAIGAASAVLFWKLFGASIIMLVAGFLSESSIDAVDKMEYPLFAIGVLAWLYIIYELWAGEAKEKVGDASEGTQFAFKAMAGILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCATTGCAGGTTTCTGAATTCTACCTAATCCTTGCAGCA---------ATT---GGTGCAGCATCTGCT---GTATTG------------------------------------TTCTGGAAG---TTATTCGGTGCATCAATCATCATGCTAGTTGCCGGATTCCTATCGGAA---------TCA------------------AGC---------------------------------------------ATT---GACGCT------GTT------------GAT---------------------------AAAATGGAA------------------TACCCATTG---TTCGCAATCGGTGTTCTAGCATGGCTATACATCATCTACGAGCTA---------------TGG------GCT---GGAGAAGCAAAGGAG---AAAGTCGGC------GAT---GCAAGCGAAGGAACA---CAA---TTC---GCT---TTC---AAG---GCAATG---GCTGGTATCCTAACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GAASA-VL------------FWK-LFGASIIMLVAGFLSE---S------S---------------I-DA--V----D---------KME------YPL-FAIGVLAWLYIIYEL-----W--A-GEAKE-KVG--D-ASEGT-Q-F-A-F-K-AM-AGILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928285 [unk-env8] PRGD_OTU030_a811641099040938504c62d38a4ebc2d gb|KJ928285| PRGD_OTU030_a811641099040938504c62d38a4ebc2d, putative proteorhodopsin gene, partial cds. PRGD_OTU030_a811641099040938504c62d38a4ebc2d, putative proteorhodopsin gene, partial cds. KJ928285 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACAGTGCCATTGCAGGTTTCTGAATTCTACCTAATCCTTGCAGCAATTGGTGCAGCATCTGCTGTATTGTTCTGGAAGTTATTCGGTGCATCAATCATCATGCTAGTTGCCGGATTCCTATCGGAATCAAGCATTGACGCTGTTGATAAAATGGAATACCCATTGTTCGCAATCGGTGTTCTAGCATGGCTATACATCATCTACGAGCTATGGGCTGGAGAAGCAAAGGAGAAAGTCAGCGATGCAAGCGAAGGTACACAATTCGCTTTCAAAGCAATGGCACTTATCCTAACCGTC LITVPLQVSEFYLILAAIGAASAVLFWKLFGASIIMLVAGFLSESSIDAVDKMEYPLFAIGVLAWLYIIYELWAGEAKEKVSDASEGTQFAFKAMALILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCATTGCAGGTTTCTGAATTCTACCTAATCCTTGCAGCA---------ATT---GGTGCAGCATCTGCT---GTATTG------------------------------------TTCTGGAAG---TTATTCGGTGCATCAATCATCATGCTAGTTGCCGGATTCCTATCGGAA---------TCA------------------AGC---------------------------------------------ATT---GACGCT------GTT------------GAT---------------------------AAAATGGAA------------------TACCCATTG---TTCGCAATCGGTGTTCTAGCATGGCTATACATCATCTACGAGCTA---------------TGG------GCT---GGAGAAGCAAAGGAG---AAAGTCAGC------GAT---GCAAGCGAAGGTACA---CAA---TTC---GCT---TTC---AAA---GCAATG---GCACTTATCCTAACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GAASA-VL------------FWK-LFGASIIMLVAGFLSE---S------S---------------I-DA--V----D---------KME------YPL-FAIGVLAWLYIIYEL-----W--A-GEAKE-KVS--D-ASEGT-Q-F-A-F-K-AM-ALILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928272 [unk-env8] PRGD_OTU030_3afd02715d8540056c2f070eca461da0 gb|KJ928272| PRGD_OTU030_3afd02715d8540056c2f070eca461da0, putative proteorhodopsin gene, partial cds. PRGD_OTU030_3afd02715d8540056c2f070eca461da0, putative proteorhodopsin gene, partial cds. KJ928272 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACAGTGCCATTGCAGGTTTCTGAATTCTACCTAATCCTTGCAGCAATTGGTGCAGCATCTGCTGTATTGTTCTGGAAGTTATTCGGTGCATCAATCATCATGCTAGTTGCTGGATTCCTATCGGAATCAAGCATTGACGCTGTTGAAGGAATGGAATACCCATTGTTCGCAATCGGTGTTCTAGCATGGCTATACATCATCTACGAACTATGGGCTGGAGAAGCAAAGGAAAAGGTCAGCGATGCAAGCGAAGGAACACAATTCGCTTTCAAAGCAATGGCAGGTATCCTAACCGTC LITVPLQVSEFYLILAAIGAASAVLFWKLFGASIIMLVAGFLSESSIDAVEGMEYPLFAIGVLAWLYIIYELWAGEAKEKVSDASEGTQFAFKAMAGILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCATTGCAGGTTTCTGAATTCTACCTAATCCTTGCAGCA---------ATT---GGTGCAGCATCTGCT---GTATTG------------------------------------TTCTGGAAG---TTATTCGGTGCATCAATCATCATGCTAGTTGCTGGATTCCTATCGGAA---------TCA------------------AGC---------------------------------------------ATT---GACGCT------GTT------------GAA---------------------------GGAATGGAA------------------TACCCATTG---TTCGCAATCGGTGTTCTAGCATGGCTATACATCATCTACGAACTA---------------TGG------GCT---GGAGAAGCAAAGGAA---AAGGTCAGC------GAT---GCAAGCGAAGGAACA---CAA---TTC---GCT---TTC---AAA---GCAATG---GCAGGTATCCTAACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GAASA-VL------------FWK-LFGASIIMLVAGFLSE---S------S---------------I-DA--V----E---------GME------YPL-FAIGVLAWLYIIYEL-----W--A-GEAKE-KVS--D-ASEGT-Q-F-A-F-K-AM-AGILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928279 [unk-env8] PRGD_OTU030_7da62c7399a865fd3d522ded727b82fd gb|KJ928279| PRGD_OTU030_7da62c7399a865fd3d522ded727b82fd, putative proteorhodopsin gene, partial cds. PRGD_OTU030_7da62c7399a865fd3d522ded727b82fd, putative proteorhodopsin gene, partial cds. KJ928279 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACAGTGCCGCTACAGGTATCTGAATTCTACCTAATCCTTGCAGCAATTGGTGCAGCATCTGCTGTATTGTTCTGGAAGTTATTCGGTGCATCAATCATCATGCTAGTTGCTGGATTCCTATCGGAATCAAGCATTGACGCTGTTGAGGGAATGGAATACCCATTGTTCGCAATCGGTGTTCTAGCATGGCTATACATCATCTACGAACTATGGGCTGGAGAAGCAAAAGAAAAGGTCAGCGATGCAAGCGAAGGAACACAATTCGCTTTCAAAGCAATGGCACTTATCCTAACCGTC LITVPLQVSEFYLILAAIGAASAVLFWKLFGASIIMLVAGFLSESSIDAVEGMEYPLFAIGVLAWLYIIYELWAGEAKEKVSDASEGTQFAFKAMALILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCGCTACAGGTATCTGAATTCTACCTAATCCTTGCAGCA---------ATT---GGTGCAGCATCTGCT---GTATTG------------------------------------TTCTGGAAG---TTATTCGGTGCATCAATCATCATGCTAGTTGCTGGATTCCTATCGGAA---------TCA------------------AGC---------------------------------------------ATT---GACGCT------GTT------------GAG---------------------------GGAATGGAA------------------TACCCATTG---TTCGCAATCGGTGTTCTAGCATGGCTATACATCATCTACGAACTA---------------TGG------GCT---GGAGAAGCAAAAGAA---AAGGTCAGC------GAT---GCAAGCGAAGGAACA---CAA---TTC---GCT---TTC---AAA---GCAATG---GCACTTATCCTAACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GAASA-VL------------FWK-LFGASIIMLVAGFLSE---S------S---------------I-DA--V----E---------GME------YPL-FAIGVLAWLYIIYEL-----W--A-GEAKE-KVS--D-ASEGT-Q-F-A-F-K-AM-ALILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928277 [unk-env8] PRGD_OTU030_770db674d73eba05c665fb5aff8a2815 gb|KJ928277| PRGD_OTU030_770db674d73eba05c665fb5aff8a2815, putative proteorhodopsin gene, partial cds. PRGD_OTU030_770db674d73eba05c665fb5aff8a2815, putative proteorhodopsin gene, partial cds. KJ928277 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTGATCACAGTGCCTTTGCAGGTATCTGAGTTCTACCTAATACTAGCAGCAATTGGTGCAGCGTCTGCTGTATTGTTCTGGAAGTTGTTCGGTGCATCCATAATCATGCTAGTTGCTGGATTCCTATCTGAATCAAGCATAGATGCTGTTGATGGAATGGAATACCCATTGTTCGCAATCGGTGTTCTAGCATGGCTATACATCATCTACGAGCTGTGGGCTGGAGAAGCAAAGGAGAAAGTCAGCGATGCAAGCGAAGGAACACAATTCGCTTTCAAAGCAATGGCAATTATCCTAACCGTC LITVPLQVSEFYLILAAIGAASAVLFWKLFGASIIMLVAGFLSESSIDAVDGMEYPLFAIGVLAWLYIIYELWAGEAKEKVSDASEGTQFAFKAMAIILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCTTTGCAGGTATCTGAGTTCTACCTAATACTAGCAGCA---------ATT---GGTGCAGCGTCTGCT---GTATTG------------------------------------TTCTGGAAG---TTGTTCGGTGCATCCATAATCATGCTAGTTGCTGGATTCCTATCTGAA---------TCA------------------AGC---------------------------------------------ATA---GATGCT------GTT------------GAT---------------------------GGAATGGAA------------------TACCCATTG---TTCGCAATCGGTGTTCTAGCATGGCTATACATCATCTACGAGCTG---------------TGG------GCT---GGAGAAGCAAAGGAG---AAAGTCAGC------GAT---GCAAGCGAAGGAACA---CAA---TTC---GCT---TTC---AAA---GCAATG---GCAATTATCCTAACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GAASA-VL------------FWK-LFGASIIMLVAGFLSE---S------S---------------I-DA--V----D---------GME------YPL-FAIGVLAWLYIIYEL-----W--A-GEAKE-KVS--D-ASEGT-Q-F-A-F-K-AM-AIILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ929852 [unk-env8] PRGD_OTU303_otuREP_081f2becac6ce6c8fe378e73ce8dd209 gb|KJ929852| PRGD_OTU303_otuREP_081f2becac6ce6c8fe378e73ce8dd209, putative proteorhodopsin gene, partial cds. PRGD_OTU303_otuREP_081f2becac6ce6c8fe378e73ce8dd209, putative proteorhodopsin gene, partial cds. KJ929852 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATTACCGTCCCATTGCAAGTTTCTGAATTCTATCTAATCCTTGCTGCAGTCGGTGTCGCTACAGCGGCTCTATTCTGGAGACTTCTAGTTGCTTCACTTGTTATGCTAATCACTGGATTCTTAGCTGAGTCCGGAGAGATGGCTGACAGTTTAACTTGGCCTTTGTTCATCGTAGGTATGCTAGCATGGATCTACATCATGTACGAAATCTGGGCTGGAGAAGCAAAAGAAAAAGTTGGACAAACCAGTGAAGGTACACAATTTGCTTTCAAAGCAATGGCACTTATCTTGACCTTT LITVPLQVSEFYLILAAVGVATAALFWRLLVASLVMLITGFLAESGEMADSLTWPLFIVGMLAWIYIMYEIWAGEAKEKVGQTSEGTQFAFKAMALILTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACCGTCCCATTGCAAGTTTCTGAATTCTATCTAATCCTTGCTGCA---------GTC---GGTGTCGCTACAGCG---GCTCTA------------------------------------TTCTGGAGA---CTTCTAGTTGCTTCACTTGTTATGCTAATCACTGGATTCTTAGCTGAG---------TCC------------------GGA---------------------------------------------------GAGATG------GCT------------GAC---------------------------AGTTTAACT------------------TGGCCTTTG---TTCATCGTAGGTATGCTAGCATGGATCTACATCATGTACGAAATC---------------TGG------GCT---GGAGAAGCAAAAGAA---AAAGTTGGA------CAA---ACCAGTGAAGGTACA---CAA---TTT---GCT---TTC---AAA---GCAATG---GCACTTATCTTGACCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---V-GVATA-AL------------FWR-LLVASLVMLITGFLAE---S------G-----------------EM--A----D---------SLT------WPL-FIVGMLAWIYIMYEI-----W--A-GEAKE-KVG--Q-TSEGT-Q-F-A-F-K-AM-ALILTF-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ929921 [unk-env8] PRGD_OTU372_otuREP_3a53df4925a198abc70d7e533074ee0f gb|KJ929921| PRGD_OTU372_otuREP_3a53df4925a198abc70d7e533074ee0f, putative proteorhodopsin gene, partial cds. PRGD_OTU372_otuREP_3a53df4925a198abc70d7e533074ee0f, putative proteorhodopsin gene, partial cds. KJ929921 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATTACAGTTCCATTACAGGTGTCAGAGTTTTACTTGATCCTTGCAGCAGTTGGAGCCGCATCTGCTATGCTATTCTGGAGGCTATTCGGTGCATCAATCGTTATGCTTGTAACTGGATTCTTGGCTGAATCGGGAGAGATGTCCTCTAGTTTGACTTGGCCTCTATTCGCAGTGGGTATGTTAGCCTGGCTATACATCATCTACGAGATTTGGGCTGGAGAGGCTAAGGAGAAAGTTGGTGAAGCAAGCGAAGGCACACAATTTGCTTTCAAGGCCATGGCTGTGATTTTAACCGTT LITVPLQVSEFYLILAAVGAASAMLFWRLFGASIVMLVTGFLAESGEMSSSLTWPLFAVGMLAWLYIIYEIWAGEAKEKVGEASEGTQFAFKAMAVILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACAGTTCCATTACAGGTGTCAGAGTTTTACTTGATCCTTGCAGCA---------GTT---GGAGCCGCATCTGCT---ATGCTA------------------------------------TTCTGGAGG---CTATTCGGTGCATCAATCGTTATGCTTGTAACTGGATTCTTGGCTGAA---------TCG------------------GGA---------------------------------------------------GAGATG------TCC------------TCT---------------------------AGTTTGACT------------------TGGCCTCTA---TTCGCAGTGGGTATGTTAGCCTGGCTATACATCATCTACGAGATT---------------TGG------GCT---GGAGAGGCTAAGGAG---AAAGTTGGT------GAA---GCAAGCGAAGGCACA---CAA---TTT---GCT---TTC---AAG---GCCATG---GCTGTGATTTTAACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---V-GAASA-ML------------FWR-LFGASIVMLVTGFLAE---S------G-----------------EM--S----S---------SLT------WPL-FAVGMLAWLYIIYEI-----W--A-GEAKE-KVG--E-ASEGT-Q-F-A-F-K-AM-AVILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ929776 [unk-env8] PRGD_OTU240_otuREP_060b8533fa7590b3d09ea06ed1b3e261 gb|KJ929776| PRGD_OTU240_otuREP_060b8533fa7590b3d09ea06ed1b3e261, putative proteorhodopsin gene, partial cds. PRGD_OTU240_otuREP_060b8533fa7590b3d09ea06ed1b3e261, putative proteorhodopsin gene, partial cds. KJ929776 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) TTGATCACCGTCCCATTGCAAGTATCCGAGTTCTACCTCATCCTTGCTGCAATCGGAGTCGCAAGCGCAGCTCTCTTCTGGAGACTCTTCGGAGCCTCCCTTGTTATGCTCGTCGCTGGATTCCTCTCAGAATCCGCCGATAGTATCGATGCTATTACGTCTTCAATGGAATGGCCATTGTTCATCGTTGGTGTCCTCGCATGGGCATACATCATCTACGAGCTCTGGGCTGGTGAAGCAAAGGAGAAGGTCAGTGGAGCAAGTGAAGGTACACAATTCGCCTTCAAGGCAATGGCTATCATCCTAACAGTC LITVPLQVSEFYLILAAIGVASAALFWRLFGASLVMLVAGFLSESADSIDAITSSMEWPLFIVGVLAWAYIIYELWAGEAKEKVSGASEGTQFAFKAMAIILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTCCCATTGCAAGTATCCGAGTTCTACCTCATCCTTGCTGCA---------ATC---GGAGTCGCAAGCGCA---GCTCTC------------------------------------TTCTGGAGA---CTCTTCGGAGCCTCCCTTGTTATGCTCGTCGCTGGATTCCTCTCAGAA---------TCC------------------GCC------GAT---------------------------------AGTATC---GATGCT------ATTACG---------TCT---------------------------TCAATGGAA------------------TGGCCATTG---TTCATCGTTGGTGTCCTCGCATGGGCATACATCATCTACGAGCTC---------------TGG------GCT---GGTGAAGCAAAGGAG---AAGGTCAGT------GGA---GCAAGTGAAGGTACA---CAA---TTC---GCC---TTC---AAG---GCAATG---GCTATCATCCTAACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GVASA-AL------------FWR-LFGASLVMLVAGFLSE---S------A--D-----------SI-DA--IT---S---------SME------WPL-FIVGVLAWAYIIYEL-----W--A-GEAKE-KVS--G-ASEGT-Q-F-A-F-K-AM-AIILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ929777 [unk-env8] PRGD_OTU240_d73e7e43b5f14368bdb0837a80ab8542 gb|KJ929777| PRGD_OTU240_d73e7e43b5f14368bdb0837a80ab8542, putative proteorhodopsin gene, partial cds. PRGD_OTU240_d73e7e43b5f14368bdb0837a80ab8542, putative proteorhodopsin gene, partial cds. KJ929777 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATTACCGTCCCATTGCAAGTATCGGAGTTCTACCTCATCCTTGCTGCAATCGGAGTCGCAAGCGCAGCTCTCTTCTGGAGACTCTTCGGAGCCTCCCTTGTTATGCTCGTCGCTGGATTCCTCTCAGAATCCTCTGATTCGATCGATGCTATTTCATCTTCAATGGAATGGCCATTGTTCATCGTTGGTGTCCTCGCATGGGTGTACATCATCTACGAGCTCTGGGCTGGTGAAGCAAAAGAGAAGGTCAGTGAAGCAAGCGAAGGTACACAATTTGCCTTCAAGGCAATGGCTATCATCCTAACAGTC LITVPLQVSEFYLILAAIGVASAALFWRLFGASLVMLVAGFLSESSDSIDAISSSMEWPLFIVGVLAWVYIIYELWAGEAKEKVSEASEGTQFAFKAMAIILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACCGTCCCATTGCAAGTATCGGAGTTCTACCTCATCCTTGCTGCA---------ATC---GGAGTCGCAAGCGCA---GCTCTC------------------------------------TTCTGGAGA---CTCTTCGGAGCCTCCCTTGTTATGCTCGTCGCTGGATTCCTCTCAGAA---------TCC------------------TCT------GAT---------------------------------TCGATC---GATGCT------ATTTCA---------TCT---------------------------TCAATGGAA------------------TGGCCATTG---TTCATCGTTGGTGTCCTCGCATGGGTGTACATCATCTACGAGCTC---------------TGG------GCT---GGTGAAGCAAAAGAG---AAGGTCAGT------GAA---GCAAGCGAAGGTACA---CAA---TTT---GCC---TTC---AAG---GCAATG---GCTATCATCCTAACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVSEFYLILAA---I-GVASA-AL------------FWR-LFGASLVMLVAGFLSE---S------S--D-----------SI-DA--IS---S---------SME------WPL-FIVGVLAWVYIIYEL-----W--A-GEAKE-KVS--E-ASEGT-Q-F-A-F-K-AM-AIILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928934 [unk-env8] PRGD_OTU062_419ae1d9a7275360d10a833b3fbd5b1a gb|KJ928934| PRGD_OTU062_419ae1d9a7275360d10a833b3fbd5b1a, putative proteorhodopsin gene, partial cds. PRGD_OTU062_419ae1d9a7275360d10a833b3fbd5b1a, putative proteorhodopsin gene, partial cds. KJ928934 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATTACTGTCCCCCTACAAGTTGCTGAATTCTACCTAATTCTAGCTGCTATTGGTGCTGCAACTGCTGCACTATTCTGGAGACTATTCGGTGCTTCCATTGTCATGCTAGTTGCTGGATTCCTAGCTGAGTCTGGAGAAATGTCTGATGGACTAACCTGGCCATTGTTCGCTGTTGGTGTAGCCGCATGGATTTACATCATCTACGAGGTCTGGGCTGGTGAAGCAAAAGAAAATGTCAGTGGTGCAAGCGAAGGAACACAATTCGCTTTCAAGGCCATGGCAATTATTCTAACAGTC LITVPLQVAEFYLILAAIGAATAALFWRLFGASIVMLVAGFLAESGEMSDGLTWPLFAVGVAAWIYIIYEVWAGEAKENVSGASEGTQFAFKAMAIILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTCCCCCTACAAGTTGCTGAATTCTACCTAATTCTAGCTGCT---------ATT---GGTGCTGCAACTGCT---GCACTA------------------------------------TTCTGGAGA---CTATTCGGTGCTTCCATTGTCATGCTAGTTGCTGGATTCCTAGCTGAG---------TCT------------------GGA---------------------------------------------------GAAATG------TCT------------GAT---------------------------GGACTAACC------------------TGGCCATTG---TTCGCTGTTGGTGTAGCCGCATGGATTTACATCATCTACGAGGTC---------------TGG------GCT---GGTGAAGCAAAAGAA---AATGTCAGT------GGT---GCAAGCGAAGGAACA---CAA---TTC---GCT---TTC---AAG---GCCATG---GCAATTATTCTAACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVAEFYLILAA---I-GAATA-AL------------FWR-LFGASIVMLVAGFLAE---S------G-----------------EM--S----D---------GLT------WPL-FAVGVAAWIYIIYEV-----W--A-GEAKE-NVS--G-ASEGT-Q-F-A-F-K-AM-AIILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928935 [unk-env8] PRGD_OTU062_51965ad5a15645297b41dae500e7161d gb|KJ928935| PRGD_OTU062_51965ad5a15645297b41dae500e7161d, putative proteorhodopsin gene, partial cds. PRGD_OTU062_51965ad5a15645297b41dae500e7161d, putative proteorhodopsin gene, partial cds. KJ928935 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATTACTGTCCCTCTACAAGTTGCTGAATTCTACCTAATTCTAGCTGCTATCGGTGCTGCAACTGCTGCACTATTCTGGAGACTCTTCGGTGCCTCCATTGTTATGCTAGTTGCTGGTTTCCTAGCAGAGTCTGGTGAAATGGACTCCGGACTAACCTGGCCATTGTTCGCTATTGGTGTAGCCGCATGGATTTACATCATCTACGAGGTCTGGGCTGGTGAAGCAAAAGAAAATGTCAGCGGTGCAAGCGAAGGTACACAATTCGCTTTCAAGGCAATGGCAATCATTCTAACAGTT LITVPLQVAEFYLILAAIGAATAALFWRLFGASIVMLVAGFLAESGEMDSGLTWPLFAIGVAAWIYIIYEVWAGEAKENVSGASEGTQFAFKAMAIILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTCCCTCTACAAGTTGCTGAATTCTACCTAATTCTAGCTGCT---------ATC---GGTGCTGCAACTGCT---GCACTA------------------------------------TTCTGGAGA---CTCTTCGGTGCCTCCATTGTTATGCTAGTTGCTGGTTTCCTAGCAGAG---------TCT------------------GGT---------------------------------------------------GAAATG------GAC------------TCC---------------------------GGACTAACC------------------TGGCCATTG---TTCGCTATTGGTGTAGCCGCATGGATTTACATCATCTACGAGGTC---------------TGG------GCT---GGTGAAGCAAAAGAA---AATGTCAGC------GGT---GCAAGCGAAGGTACA---CAA---TTC---GCT---TTC---AAG---GCAATG---GCAATCATTCTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVAEFYLILAA---I-GAATA-AL------------FWR-LFGASIVMLVAGFLAE---S------G-----------------EM--D----S---------GLT------WPL-FAIGVAAWIYIIYEV-----W--A-GEAKE-NVS--G-ASEGT-Q-F-A-F-K-AM-AIILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928936 [unk-env8] PRGD_OTU062_52f1199dfe09a37b2159f876e1191cef gb|KJ928936| PRGD_OTU062_52f1199dfe09a37b2159f876e1191cef, putative proteorhodopsin gene, partial cds. PRGD_OTU062_52f1199dfe09a37b2159f876e1191cef, putative proteorhodopsin gene, partial cds. KJ928936 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Mediterranean Sea (38.6308, 7.9097) TTGATTACTGTCCCACTACAAGTTGCTGAATTCTACTTGATTCTGGCTGCTATTGGTGCTGCTACTGCTGCACTATTCTGGAGACTTTTCGGAGCATCTCTCGTTATGCTAGTTGCTGGTTTCCTAGCAGAGTCTGGAGAAATGTCTGACGGACTCACCTGGCCACTGTTCGCAGTTGGTGTAGCCGCATGGATTTACATCATCTACGAGATTTGGGCTGGTGAAGCAAAGGAGAACGTTAGCGGCGCAAGCGAAGGTACACAATTCGCTTTCAAGGCAATGGCAATCATTCTAACAGTT LITVPLQVAEFYLILAAIGAATAALFWRLFGASLVMLVAGFLAESGEMSDGLTWPLFAVGVAAWIYIIYEIWAGEAKENVSGASEGTQFAFKAMAIILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTCCCACTACAAGTTGCTGAATTCTACTTGATTCTGGCTGCT---------ATT---GGTGCTGCTACTGCT---GCACTA------------------------------------TTCTGGAGA---CTTTTCGGAGCATCTCTCGTTATGCTAGTTGCTGGTTTCCTAGCAGAG---------TCT------------------GGA---------------------------------------------------GAAATG------TCT------------GAC---------------------------GGACTCACC------------------TGGCCACTG---TTCGCAGTTGGTGTAGCCGCATGGATTTACATCATCTACGAGATT---------------TGG------GCT---GGTGAAGCAAAGGAG---AACGTTAGC------GGC---GCAAGCGAAGGTACA---CAA---TTC---GCT---TTC---AAG---GCAATG---GCAATCATTCTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVAEFYLILAA---I-GAATA-AL------------FWR-LFGASLVMLVAGFLAE---S------G-----------------EM--S----D---------GLT------WPL-FAVGVAAWIYIIYEI-----W--A-GEAKE-NVS--G-ASEGT-Q-F-A-F-K-AM-AIILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928940 [unk-env8] PRGD_OTU062_8203bf189e6b840fbac8a00275db99e9 gb|KJ928940| PRGD_OTU062_8203bf189e6b840fbac8a00275db99e9, putative proteorhodopsin gene, partial cds. PRGD_OTU062_8203bf189e6b840fbac8a00275db99e9, putative proteorhodopsin gene, partial cds. KJ928940 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATTACTGTCCCACTACAAGTTGCTGAATTCTACTTGATTCTAGCTGCTATTGGTGCTGCTACTGCTGCACTATTCTGGAGACTTTTCGGAGCATCTCTTGTTATGCTAGTTGCTGGTTTCCTAGCAGAGTCTGGAGAAATGTCTGACGGACTAACCTGGCCACTGTTCGCAGTTGGTGTAGCCGCATGGATTTACATCATCTACGAGATTTGGGCTGGTGAAGCAAAGGAGAACGTTAGCGGCGCAAGCGAAGGTACACAATTCGCTTTCAAGGCAATGGCAATCATTCTGACAGTT LITVPLQVAEFYLILAAIGAATAALFWRLFGASLVMLVAGFLAESGEMSDGLTWPLFAVGVAAWIYIIYEIWAGEAKENVSGASEGTQFAFKAMAIILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTCCCACTACAAGTTGCTGAATTCTACTTGATTCTAGCTGCT---------ATT---GGTGCTGCTACTGCT---GCACTA------------------------------------TTCTGGAGA---CTTTTCGGAGCATCTCTTGTTATGCTAGTTGCTGGTTTCCTAGCAGAG---------TCT------------------GGA---------------------------------------------------GAAATG------TCT------------GAC---------------------------GGACTAACC------------------TGGCCACTG---TTCGCAGTTGGTGTAGCCGCATGGATTTACATCATCTACGAGATT---------------TGG------GCT---GGTGAAGCAAAGGAG---AACGTTAGC------GGC---GCAAGCGAAGGTACA---CAA---TTC---GCT---TTC---AAG---GCAATG---GCAATCATTCTGACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVAEFYLILAA---I-GAATA-AL------------FWR-LFGASLVMLVAGFLAE---S------G-----------------EM--S----D---------GLT------WPL-FAVGVAAWIYIIYEI-----W--A-GEAKE-NVS--G-ASEGT-Q-F-A-F-K-AM-AIILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928939 [unk-env8] PRGD_OTU062_786c47e7b622f6f36c1338c69c856f51 gb|KJ928939| PRGD_OTU062_786c47e7b622f6f36c1338c69c856f51, putative proteorhodopsin gene, partial cds. PRGD_OTU062_786c47e7b622f6f36c1338c69c856f51, putative proteorhodopsin gene, partial cds. KJ928939 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATTACTGTCCCACTACAAGTTGCTGAATTCTACCTAATTCTAGCTGCTATTGGTGCTGCTACTGCTGCACTATTCTGGAGACTCTTCGGAGCATCTCTAGTTATGCTAGTTGCTGGTTTCCTAGCAGAGTCCGGAGAAATGGACGACGGTCTAACCTGGCCATTGTTCGCTATCGGTGTCGCTGCATGGATTTACATCATCTACGAGATCTGGGCTGGCGAAGCAAAGGAGAACGTTAGCGGTGCAAGCGAAGGAACACAATTCGCTTTCAAGGCTATGGCAATCATCCTAACCGTT LITVPLQVAEFYLILAAIGAATAALFWRLFGASLVMLVAGFLAESGEMDDGLTWPLFAIGVAAWIYIIYEIWAGEAKENVSGASEGTQFAFKAMAIILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTCCCACTACAAGTTGCTGAATTCTACCTAATTCTAGCTGCT---------ATT---GGTGCTGCTACTGCT---GCACTA------------------------------------TTCTGGAGA---CTCTTCGGAGCATCTCTAGTTATGCTAGTTGCTGGTTTCCTAGCAGAG---------TCC------------------GGA---------------------------------------------------GAAATG------GAC------------GAC---------------------------GGTCTAACC------------------TGGCCATTG---TTCGCTATCGGTGTCGCTGCATGGATTTACATCATCTACGAGATC---------------TGG------GCT---GGCGAAGCAAAGGAG---AACGTTAGC------GGT---GCAAGCGAAGGAACA---CAA---TTC---GCT---TTC---AAG---GCTATG---GCAATCATCCTAACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVAEFYLILAA---I-GAATA-AL------------FWR-LFGASLVMLVAGFLAE---S------G-----------------EM--D----D---------GLT------WPL-FAIGVAAWIYIIYEI-----W--A-GEAKE-NVS--G-ASEGT-Q-F-A-F-K-AM-AIILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928941 [unk-env8] PRGD_OTU062_a630831c11a7cc335126b6c7f68558db gb|KJ928941| PRGD_OTU062_a630831c11a7cc335126b6c7f68558db, putative proteorhodopsin gene, partial cds. PRGD_OTU062_a630831c11a7cc335126b6c7f68558db, putative proteorhodopsin gene, partial cds. KJ928941 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATTACTGTCCCACTACAAGTTGCTGAATTCTACCTAATTCTAGCTGCTATTGGTGCTGCTACTGCTGCACTATTCTGGAGACTCTTTGGAGCATCTCTAGTTATGCTAGTTGCTGGTTTCCTAGCAGAGTCCGGAGAAATGGACGACGGTCTAACCTGGCCATTGTTCGCTATCGGTGTCGCTGCATGGATTTACATCATCTACGAGATCTGGGCTGGCGAAGCAAAGGAGAACGTTAGCGGTGCAAGCGAAGGAACTCAATTCGCTTTCAAAGCAATGGCTTTAATTCTAACATTT LITVPLQVAEFYLILAAIGAATAALFWRLFGASLVMLVAGFLAESGEMDDGLTWPLFAIGVAAWIYIIYEIWAGEAKENVSGASEGTQFAFKAMALILTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTCCCACTACAAGTTGCTGAATTCTACCTAATTCTAGCTGCT---------ATT---GGTGCTGCTACTGCT---GCACTA------------------------------------TTCTGGAGA---CTCTTTGGAGCATCTCTAGTTATGCTAGTTGCTGGTTTCCTAGCAGAG---------TCC------------------GGA---------------------------------------------------GAAATG------GAC------------GAC---------------------------GGTCTAACC------------------TGGCCATTG---TTCGCTATCGGTGTCGCTGCATGGATTTACATCATCTACGAGATC---------------TGG------GCT---GGCGAAGCAAAGGAG---AACGTTAGC------GGT---GCAAGCGAAGGAACT---CAA---TTC---GCT---TTC---AAA---GCAATG---GCTTTAATTCTAACATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVAEFYLILAA---I-GAATA-AL------------FWR-LFGASLVMLVAGFLAE---S------G-----------------EM--D----D---------GLT------WPL-FAIGVAAWIYIIYEI-----W--A-GEAKE-NVS--G-ASEGT-Q-F-A-F-K-AM-ALILTF-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928942 [unk-env8] PRGD_OTU062_d60a539022b92bd5192514a4adcd60ba gb|KJ928942| PRGD_OTU062_d60a539022b92bd5192514a4adcd60ba, putative proteorhodopsin gene, partial cds. PRGD_OTU062_d60a539022b92bd5192514a4adcd60ba, putative proteorhodopsin gene, partial cds. KJ928942 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATTACTGTCCCACTACAAGTTGCTGAATTCTACCTAATTCTAGCTGCTATTGGTGCTGCTACTGCTGCACTATTCTGGAGACTCTTTGGAGCATCTCTAGTTATGCTAGTTGCTGGTTTCCTAGCAGAGTCCGGAGAAATGGACGACGGTCTAACCTGGCCATTGTTCGCTATCGGTGTCGCTGCATGGATTTACATCATCTACGAGATCTGGGCTGGCGAAGCAAAGGAGAATGTAAGCGGTGCAAGCGAAGGAACACAATTCGCTTTCAAGGCTATGGCAATCATCCTAACCGTT LITVPLQVAEFYLILAAIGAATAALFWRLFGASLVMLVAGFLAESGEMDDGLTWPLFAIGVAAWIYIIYEIWAGEAKENVSGASEGTQFAFKAMAIILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTCCCACTACAAGTTGCTGAATTCTACCTAATTCTAGCTGCT---------ATT---GGTGCTGCTACTGCT---GCACTA------------------------------------TTCTGGAGA---CTCTTTGGAGCATCTCTAGTTATGCTAGTTGCTGGTTTCCTAGCAGAG---------TCC------------------GGA---------------------------------------------------GAAATG------GAC------------GAC---------------------------GGTCTAACC------------------TGGCCATTG---TTCGCTATCGGTGTCGCTGCATGGATTTACATCATCTACGAGATC---------------TGG------GCT---GGCGAAGCAAAGGAG---AATGTAAGC------GGT---GCAAGCGAAGGAACA---CAA---TTC---GCT---TTC---AAG---GCTATG---GCAATCATCCTAACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVAEFYLILAA---I-GAATA-AL------------FWR-LFGASLVMLVAGFLAE---S------G-----------------EM--D----D---------GLT------WPL-FAIGVAAWIYIIYEI-----W--A-GEAKE-NVS--G-ASEGT-Q-F-A-F-K-AM-AIILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928931 [unk-env8] PRGD_OTU062_1c8f433fdda73a6138e21365b3a1cad7 gb|KJ928931| PRGD_OTU062_1c8f433fdda73a6138e21365b3a1cad7, putative proteorhodopsin gene, partial cds. PRGD_OTU062_1c8f433fdda73a6138e21365b3a1cad7, putative proteorhodopsin gene, partial cds. KJ928931 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATTACTGTCCCACTACAAGTTGCTGAATTCTACCTAATTCTAGCTGCTATTGGTGCTGCAACCGCTGCACTATTCTGGAGACTCTTCGGAGCATCTCTAGTAATGCTAGTTGCTGGTTTCCTAGCAGAGTCCGGAGAGATGAGCGACGGCCTAACATGGCCATTGTTCGCTATCGGTGTCGCTGCATGGATTTACATCATCTACGAGATCTGGGCTGGTGAAGCAAAGGAGAATGTTAGCGGTGCAAGCGAAGGAACACAATTCGCTTTCAAGGCTATGGCAATTATCCTAACCGTT LITVPLQVAEFYLILAAIGAATAALFWRLFGASLVMLVAGFLAESGEMSDGLTWPLFAIGVAAWIYIIYEIWAGEAKENVSGASEGTQFAFKAMAIILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTCCCACTACAAGTTGCTGAATTCTACCTAATTCTAGCTGCT---------ATT---GGTGCTGCAACCGCT---GCACTA------------------------------------TTCTGGAGA---CTCTTCGGAGCATCTCTAGTAATGCTAGTTGCTGGTTTCCTAGCAGAG---------TCC------------------GGA---------------------------------------------------GAGATG------AGC------------GAC---------------------------GGCCTAACA------------------TGGCCATTG---TTCGCTATCGGTGTCGCTGCATGGATTTACATCATCTACGAGATC---------------TGG------GCT---GGTGAAGCAAAGGAG---AATGTTAGC------GGT---GCAAGCGAAGGAACA---CAA---TTC---GCT---TTC---AAG---GCTATG---GCAATTATCCTAACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVAEFYLILAA---I-GAATA-AL------------FWR-LFGASLVMLVAGFLAE---S------G-----------------EM--S----D---------GLT------WPL-FAIGVAAWIYIIYEI-----W--A-GEAKE-NVS--G-ASEGT-Q-F-A-F-K-AM-AIILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928943 [unk-env8] PRGD_OTU062_ed59b0b4da461ebdae93aae70eaa1301 gb|KJ928943| PRGD_OTU062_ed59b0b4da461ebdae93aae70eaa1301, putative proteorhodopsin gene, partial cds. PRGD_OTU062_ed59b0b4da461ebdae93aae70eaa1301, putative proteorhodopsin gene, partial cds. KJ928943 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTGATTACTGTCCCACTACAAGTTGCTGAATTCTACCTAATTCTAGCAGCTATTGGTGCTGCAACCGCTGCACTATTCTGGAGACTCTTCGGAGCATCCCTAGTAATGCTAGTTGCTGGTTTCCTAGCAGAGTCCGGAGAGATGAGCGACGGCCTAACATGGCCATTGTTCGCTATCGGTGTAGCTGCATGGATTTACATCATCTACGAGATCTGGGCTGGTGAAGCAAAGGAGAATGTTAGCGGTGCAAGCGAAGGAACACAATTCGCTTTCAAGGCTATGGCAATTATCCTAACCATT LITVPLQVAEFYLILAAIGAATAALFWRLFGASLVMLVAGFLAESGEMSDGLTWPLFAIGVAAWIYIIYEIWAGEAKENVSGASEGTQFAFKAMAIILTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTCCCACTACAAGTTGCTGAATTCTACCTAATTCTAGCAGCT---------ATT---GGTGCTGCAACCGCT---GCACTA------------------------------------TTCTGGAGA---CTCTTCGGAGCATCCCTAGTAATGCTAGTTGCTGGTTTCCTAGCAGAG---------TCC------------------GGA---------------------------------------------------GAGATG------AGC------------GAC---------------------------GGCCTAACA------------------TGGCCATTG---TTCGCTATCGGTGTAGCTGCATGGATTTACATCATCTACGAGATC---------------TGG------GCT---GGTGAAGCAAAGGAG---AATGTTAGC------GGT---GCAAGCGAAGGAACA---CAA---TTC---GCT---TTC---AAG---GCTATG---GCAATTATCCTAACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVAEFYLILAA---I-GAATA-AL------------FWR-LFGASLVMLVAGFLAE---S------G-----------------EM--S----D---------GLT------WPL-FAIGVAAWIYIIYEI-----W--A-GEAKE-NVS--G-ASEGT-Q-F-A-F-K-AM-AIILTI-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928937 [unk-env8] PRGD_OTU062_5eef4a998b1186550d592d4aa73c00d7 gb|KJ928937| PRGD_OTU062_5eef4a998b1186550d592d4aa73c00d7, putative proteorhodopsin gene, partial cds. PRGD_OTU062_5eef4a998b1186550d592d4aa73c00d7, putative proteorhodopsin gene, partial cds. KJ928937 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTGATTACCGTGCCACTACAAGTTGCTGAATTCTACCTAATTCTAGCTGCTATCGGTGCTGCTACTGCTGCACTGTTCTGGAGACTCTTCGGAGCATCTCTAGTAATGCTAGTTGCTGGTTTCCTAGCAGAGTCCGGAGAGATGGACGACGGTCTAACCTGGCCATTGTTCGCCATCGGTGTTGCTGCATGGATTTACATCATCTACGAGATTTGGGCTGGTGAAGCAAAGGAGAACGTTAGCGGTGCAAGCGAAGGAACACAATTCGCTTTCAAGGCTATGGCAATCATCCTAACCGTT LITVPLQVAEFYLILAAIGAATAALFWRLFGASLVMLVAGFLAESGEMDDGLTWPLFAIGVAAWIYIIYEIWAGEAKENVSGASEGTQFAFKAMAIILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACCGTGCCACTACAAGTTGCTGAATTCTACCTAATTCTAGCTGCT---------ATC---GGTGCTGCTACTGCT---GCACTG------------------------------------TTCTGGAGA---CTCTTCGGAGCATCTCTAGTAATGCTAGTTGCTGGTTTCCTAGCAGAG---------TCC------------------GGA---------------------------------------------------GAGATG------GAC------------GAC---------------------------GGTCTAACC------------------TGGCCATTG---TTCGCCATCGGTGTTGCTGCATGGATTTACATCATCTACGAGATT---------------TGG------GCT---GGTGAAGCAAAGGAG---AACGTTAGC------GGT---GCAAGCGAAGGAACA---CAA---TTC---GCT---TTC---AAG---GCTATG---GCAATCATCCTAACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVAEFYLILAA---I-GAATA-AL------------FWR-LFGASLVMLVAGFLAE---S------G-----------------EM--D----D---------GLT------WPL-FAIGVAAWIYIIYEI-----W--A-GEAKE-NVS--G-ASEGT-Q-F-A-F-K-AM-AIILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928930 [unk-env8] PRGD_OTU062_otuREP_a8ce371bc3908410d0c6ac2bffe4f54c gb|KJ928930| PRGD_OTU062_otuREP_a8ce371bc3908410d0c6ac2bffe4f54c, putative proteorhodopsin gene, partial cds. PRGD_OTU062_otuREP_a8ce371bc3908410d0c6ac2bffe4f54c, putative proteorhodopsin gene, partial cds. KJ928930 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097), English Channel (48.7717, -3.9683), Mediterranean Sea (33.935, 18.508), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTGATTACTGTGCCACTACAAGTTGCTGAATTCTACCTAATTCTAGCTGCTATCGGTGCTGCTACCGCTGCACTGTTCTGGAGACTCTTCGGAGCATCTCTAGTAATGCTAGTTGCTGGTTTCCTCGCAGAGTCCGGAGAAATGGACGACGGTCTAACCTGGCCATTGTTCGCTATCGGAGTTGCTGCATGGATTTACATCATCTACGAAATCTGGGCTGGTGAAGCAAAGGAGAACGTTAGCGGTGCAAGCGAAGGAACACAATTTGCTTTCAAGGCTATGGCAATCATCCTAACCGTT LITVPLQVAEFYLILAAIGAATAALFWRLFGASLVMLVAGFLAESGEMDDGLTWPLFAIGVAAWIYIIYEIWAGEAKENVSGASEGTQFAFKAMAIILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCACTACAAGTTGCTGAATTCTACCTAATTCTAGCTGCT---------ATC---GGTGCTGCTACCGCT---GCACTG------------------------------------TTCTGGAGA---CTCTTCGGAGCATCTCTAGTAATGCTAGTTGCTGGTTTCCTCGCAGAG---------TCC------------------GGA---------------------------------------------------GAAATG------GAC------------GAC---------------------------GGTCTAACC------------------TGGCCATTG---TTCGCTATCGGAGTTGCTGCATGGATTTACATCATCTACGAAATC---------------TGG------GCT---GGTGAAGCAAAGGAG---AACGTTAGC------GGT---GCAAGCGAAGGAACA---CAA---TTT---GCT---TTC---AAG---GCTATG---GCAATCATCCTAACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVAEFYLILAA---I-GAATA-AL------------FWR-LFGASLVMLVAGFLAE---S------G-----------------EM--D----D---------GLT------WPL-FAIGVAAWIYIIYEI-----W--A-GEAKE-NVS--G-ASEGT-Q-F-A-F-K-AM-AIILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928932 [unk-env8] PRGD_OTU062_29f04b3d888bd4b48067f5c6a9345715 gb|KJ928932| PRGD_OTU062_29f04b3d888bd4b48067f5c6a9345715, putative proteorhodopsin gene, partial cds. PRGD_OTU062_29f04b3d888bd4b48067f5c6a9345715, putative proteorhodopsin gene, partial cds. KJ928932 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637), Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45; -33.28, 45.35) TTGATTACTGTGCCACTACAAGTTGCTGAATTCTACCTAATTCTGGCTGCTATCGGTGCTGCTACTGCTGCACTGTTCTGGAGACTCTTCGGAGCATCCCTAGTCATGCTAATTGCTGGTTTCCTAGCGGAATCTGGAGAAATGGACGACGGTCTAACCTGGCCATTGTTCGCTATCGGTGTAGCTGCATGGATTTACATCATCTACGAGATTTGGGCTGGTGAAGCAAAGGAGAATGTTAGCGGTGCAAGCGAAGGAACACAATTCGCTTTCAAGGCTATGGCAATCATCCTAACCGTT LITVPLQVAEFYLILAAIGAATAALFWRLFGASLVMLIAGFLAESGEMDDGLTWPLFAIGVAAWIYIIYEIWAGEAKENVSGASEGTQFAFKAMAIILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCACTACAAGTTGCTGAATTCTACCTAATTCTGGCTGCT---------ATC---GGTGCTGCTACTGCT---GCACTG------------------------------------TTCTGGAGA---CTCTTCGGAGCATCCCTAGTCATGCTAATTGCTGGTTTCCTAGCGGAA---------TCT------------------GGA---------------------------------------------------GAAATG------GAC------------GAC---------------------------GGTCTAACC------------------TGGCCATTG---TTCGCTATCGGTGTAGCTGCATGGATTTACATCATCTACGAGATT---------------TGG------GCT---GGTGAAGCAAAGGAG---AATGTTAGC------GGT---GCAAGCGAAGGAACA---CAA---TTC---GCT---TTC---AAG---GCTATG---GCAATCATCCTAACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVAEFYLILAA---I-GAATA-AL------------FWR-LFGASLVMLIAGFLAE---S------G-----------------EM--D----D---------GLT------WPL-FAIGVAAWIYIIYEI-----W--A-GEAKE-NVS--G-ASEGT-Q-F-A-F-K-AM-AIILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928938 [unk-env8] PRGD_OTU062_732b638bf74ffcb7b5784ecb94e9f5f0 gb|KJ928938| PRGD_OTU062_732b638bf74ffcb7b5784ecb94e9f5f0, putative proteorhodopsin gene, partial cds. PRGD_OTU062_732b638bf74ffcb7b5784ecb94e9f5f0, putative proteorhodopsin gene, partial cds. KJ928938 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATTACTGTGCCACTACAAGTTGCTGAATTCTACCTAATTCTGGCTGCTATCGGTGCTGCTACTGCTGCACTGTTCTGGAGACTCTTCGGAGCATCTTTAGTCATGCTAATTGCTGGTTTCCTAGCGGAATCTGGAGAAATGGACGACGGTCTAACCTGGCCATTGTTCGCTATCGGTGTAGCTGCATGGATTTACATCATCTACGAGATTTGGGCTGGTGAAGCAAAGGAGAATGTTAGCGGTGCAAGCGAAGGAACACAATTCGCTTTCAAGGCTATGGCAATCATCCTAACCGTT LITVPLQVAEFYLILAAIGAATAALFWRLFGASLVMLIAGFLAESGEMDDGLTWPLFAIGVAAWIYIIYEIWAGEAKENVSGASEGTQFAFKAMAIILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCACTACAAGTTGCTGAATTCTACCTAATTCTGGCTGCT---------ATC---GGTGCTGCTACTGCT---GCACTG------------------------------------TTCTGGAGA---CTCTTCGGAGCATCTTTAGTCATGCTAATTGCTGGTTTCCTAGCGGAA---------TCT------------------GGA---------------------------------------------------GAAATG------GAC------------GAC---------------------------GGTCTAACC------------------TGGCCATTG---TTCGCTATCGGTGTAGCTGCATGGATTTACATCATCTACGAGATT---------------TGG------GCT---GGTGAAGCAAAGGAG---AATGTTAGC------GGT---GCAAGCGAAGGAACA---CAA---TTC---GCT---TTC---AAG---GCTATG---GCAATCATCCTAACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVAEFYLILAA---I-GAATA-AL------------FWR-LFGASLVMLIAGFLAE---S------G-----------------EM--D----D---------GLT------WPL-FAIGVAAWIYIIYEI-----W--A-GEAKE-NVS--G-ASEGT-Q-F-A-F-K-AM-AIILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928933 [unk-env8] PRGD_OTU062_3be596428a74c42255ea37b2076a1051 gb|KJ928933| PRGD_OTU062_3be596428a74c42255ea37b2076a1051, putative proteorhodopsin gene, partial cds. PRGD_OTU062_3be596428a74c42255ea37b2076a1051, putative proteorhodopsin gene, partial cds. KJ928933 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATTACTGTGCCACTACAAGTTGCTGAATTCTACCTAATTCTGGCTGCTATCGGTGCTGCTACTGCTGCACTGTTCTGGAGACTCTTCGGAGCATCTCTAGTAATGCTAGTTGCTGGTTTCCTAGCGGAATCTGGAGAAATGGACGACGGTCTAACCTGGCCATTGTTCGCGATCGGTGTCGCTGCATGGATTTACATCATCTACGAGATTTGGGCTGGTGAAGCAAAGGAGAATGTTAGCGGTGCAAGCGAAGGAACACAATTCGCTTTCAAGGCTATGGCAATCATCCTAACCGTT LITVPLQVAEFYLILAAIGAATAALFWRLFGASLVMLVAGFLAESGEMDDGLTWPLFAIGVAAWIYIIYEIWAGEAKENVSGASEGTQFAFKAMAIILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCACTACAAGTTGCTGAATTCTACCTAATTCTGGCTGCT---------ATC---GGTGCTGCTACTGCT---GCACTG------------------------------------TTCTGGAGA---CTCTTCGGAGCATCTCTAGTAATGCTAGTTGCTGGTTTCCTAGCGGAA---------TCT------------------GGA---------------------------------------------------GAAATG------GAC------------GAC---------------------------GGTCTAACC------------------TGGCCATTG---TTCGCGATCGGTGTCGCTGCATGGATTTACATCATCTACGAGATT---------------TGG------GCT---GGTGAAGCAAAGGAG---AATGTTAGC------GGT---GCAAGCGAAGGAACA---CAA---TTC---GCT---TTC---AAG---GCTATG---GCAATCATCCTAACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVAEFYLILAA---I-GAATA-AL------------FWR-LFGASLVMLVAGFLAE---S------G-----------------EM--D----D---------GLT------WPL-FAIGVAAWIYIIYEI-----W--A-GEAKE-NVS--G-ASEGT-Q-F-A-F-K-AM-AIILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928649 [unk-env8] PRGD_OTU045_93fc4db66c0243bb5ce19977a9d3d972 gb|KJ928649| PRGD_OTU045_93fc4db66c0243bb5ce19977a9d3d972, putative proteorhodopsin gene, partial cds. PRGD_OTU045_93fc4db66c0243bb5ce19977a9d3d972, putative proteorhodopsin gene, partial cds. KJ928649 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCATCACTGTCCCACTACAAGTAGCTGAATTTTACCTAATATTGGCTGCAGTCGGTGCGGCTACTGCCATGCTATTCTGGCGCCTCTTTGGCGCATCTCTAATCATGCTAATCAGCGGATTCCTTGGAGAGGCTGGCCACGCACCCGAGATGCCAATGCTGATCATCGGATGTCTTGCTTGGTTCTACATCATGTATGAGGTGTGGGCAGGTGATGCAAAGAAAGGAGCAGATACCGCTTCTGAAGGAACCCAGTTCGCTTTCCGAGCCATGGCAATCATCCTAACTGTT LITVPLQVAEFYLILAAVGAATAMLFWRLFGASLIMLISGFLGEAGHAPEMPMLIIGCLAWFYIMYEVWAGDAKKGADTASEGTQFAFRAMAIILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACTGTCCCACTACAAGTAGCTGAATTTTACCTAATATTGGCTGCA---------GTC---GGTGCGGCTACTGCC---ATGCTA------------------------------------TTCTGGCGC---CTCTTTGGCGCATCTCTAATCATGCTAATCAGCGGATTCCTTGGAGAG---------GCT------------------GGC------CAC---------------------------------GCACCC------------------------------------------------------------------GAG------------------ATGCCAATG---CTGATCATCGGATGTCTTGCTTGGTTCTACATCATGTATGAGGTG---------------TGG------GCA---GGTGATGCAAAGAAA---GGAGCAGAT------ACC---GCTTCTGAAGGAACC---CAG---TTC---GCT---TTC---CGA---GCCATG---GCAATCATCCTAACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVAEFYLILAA---V-GAATA-ML------------FWR-LFGASLIMLISGFLGE---A------G--H-----------AP----------------------E------MPM-LIIGCLAWFYIMYEV-----W--A-GDAKK-GAD--T-ASEGT-Q-F-A-F-R-AM-AIILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ928657 [unk-env8] PRGD_OTU045_f5bf08ec77977eb43b4c3ae6fa9006f9 gb|KJ928657| PRGD_OTU045_f5bf08ec77977eb43b4c3ae6fa9006f9, putative proteorhodopsin gene, partial cds. PRGD_OTU045_f5bf08ec77977eb43b4c3ae6fa9006f9, putative proteorhodopsin gene, partial cds. KJ928657 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) CTAATTACGGTGCCACTCCAAGTTGCTGAGTTCTACCTAATTCTAGCTGCAGTAGGAGCAGCCACTGCTATGCTGTTCTGGCGCCTCTTTGGCGCATCTCTAATCATGCTAATCAGCGGATACCTCGGAGAAGCGGGTCATGCGCCTGAAATGCCAATGTTGGTGATCGGATGTATCGCTTGGTTCTACATCATGTATGAGGTGTGGGCTGGAGACGCTAAGAAAGGGGCAGACACTGCCTCCGAAGGAACTCAGTTTGCTTTCCGTGCCATGGCAATTATCCTAACAGTT LITVPLQVAEFYLILAAVGAATAMLFWRLFGASLIMLISGYLGEAGHAPEMPMLVIGCIAWFYIMYEVWAGDAKKGADTASEGTQFAFRAMAIILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACGGTGCCACTCCAAGTTGCTGAGTTCTACCTAATTCTAGCTGCA---------GTA---GGAGCAGCCACTGCT---ATGCTG------------------------------------TTCTGGCGC---CTCTTTGGCGCATCTCTAATCATGCTAATCAGCGGATACCTCGGAGAA---------GCG------------------GGT------CAT---------------------------------GCGCCT------------------------------------------------------------------GAA------------------ATGCCAATG---TTGGTGATCGGATGTATCGCTTGGTTCTACATCATGTATGAGGTG---------------TGG------GCT---GGAGACGCTAAGAAA---GGGGCAGAC------ACT---GCCTCCGAAGGAACT---CAG---TTT---GCT---TTC---CGT---GCCATG---GCAATTATCCTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVAEFYLILAA---V-GAATA-ML------------FWR-LFGASLIMLISGYLGE---A------G--H-----------AP----------------------E------MPM-LVIGCIAWFYIMYEV-----W--A-GDAKK-GAD--T-ASEGT-Q-F-A-F-R-AM-AIILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ929814 [unk-env8] PRGD_OTU265_otuREP_f39f14159731238a73683f3ba7803494 gb|KJ929814| PRGD_OTU265_otuREP_f39f14159731238a73683f3ba7803494, putative proteorhodopsin gene, partial cds. PRGD_OTU265_otuREP_f39f14159731238a73683f3ba7803494, putative proteorhodopsin gene, partial cds. KJ929814 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTGATCACAGTACCTCTGCAGGTTACTGAATTCTACCTTATCCTAGCAGCAGTAGGAGTCGCAACTGCAGCTCTTTTCTGGCGCTTGTTCGGAGCATCTTTGTTGATGTTAATCACCGGATACCTGGGAGAAGCAGAATCTGGAACAGGCGGTCTTGTTGAAGGAATGGAAATGGTCATGTTCTTCATCGGTTGTGCTGCTTGGTTCTACATCATGTACGAAGTATGGGGTGGAGAAGCTCAGAAGAGTGCTGCTACAGCATCTGAATCAACTCAGTTTGCTTTCAAGGCAATGGCTGGAATCTTAACAGTT LITVPLQVTEFYLILAAVGVATAALFWRLFGASLLMLITGYLGEAESGTGGLVEGMEMVMFFIGCAAWFYIMYEVWGGEAQKSAATASESTQFAFKAMAGILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTACCTCTGCAGGTTACTGAATTCTACCTTATCCTAGCAGCA---------GTA---GGAGTCGCAACTGCA---GCTCTT------------------------------------TTCTGGCGC---TTGTTCGGAGCATCTTTGTTGATGTTAATCACCGGATACCTGGGAGAA---------GCA------------------GAA------TCT---------------------------------GGAACA---GGCGGT------CTTGTT---------GAA---------------------------GGAATGGAA------------------ATGGTCATG---TTCTTCATCGGTTGTGCTGCTTGGTTCTACATCATGTACGAAGTA---------------TGG------GGT---GGAGAAGCTCAGAAG---AGTGCTGCT------ACA---GCATCTGAATCAACT---CAG---TTT---GCT---TTC---AAG---GCAATG---GCTGGAATCTTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVTEFYLILAA---V-GVATA-AL------------FWR-LFGASLLMLITGYLGE---A------E--S-----------GT-GG--LV---E---------GME------MVM-FFIGCAAWFYIMYEV-----W--G-GEAQK-SAA--T-ASEST-Q-F-A-F-K-AM-AGILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ929254 [unk-env8] PRGD_OTU093_b3f0c348c563b7fd69e876593b1c7b33 gb|KJ929254| PRGD_OTU093_b3f0c348c563b7fd69e876593b1c7b33, putative proteorhodopsin gene, partial cds. PRGD_OTU093_b3f0c348c563b7fd69e876593b1c7b33, putative proteorhodopsin gene, partial cds. KJ929254 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) ATATTAACTGTTCCACTTCAAATTGTAGAATTCTATTTAATACTTGCAGCTGTAGGAGCTGTTGCTGGTAGAGTTTTCTGGAACTTACTAGTTGCTTCACTTGTTATGCTTATTGCAGGTTACGTAGGTGAAGTTGGGTATGTAAATGTTTGGCTCGCCTTCATCGTTGGTATGCTAGGATGGATTTACATTCTTTATGCAATTTTTGCTGGGGACGCTCAGGAAAATCTATCAAGTGCACCTGAAGGAGTTCAGTCAGCTTTTAAAACAATGAGATTAATTGTTTTAGTA ILTVPLQIVEFYLILAAVGAVAGRVFWNLLVASLVMLIAGYVGEVGYVNVWLAFIVGMLGWIYILYAIFAGDAQENLSSAPEGVQSAFKTMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTAACTGTTCCACTTCAAATTGTAGAATTCTATTTAATACTTGCAGCT---------GTA---GGAGCTGTTGCTGGT---AGAGTT------------------------------------TTCTGGAAC---TTACTAGTTGCTTCACTTGTTATGCTTATTGCAGGTTACGTAGGTGAA---------GTT------------------GGG------TAT---------------------------------GTA------------------------------------------------------------------AATGTT------------------TGGCTCGCC---TTCATCGTTGGTATGCTAGGATGGATTTACATTCTTTATGCAATT---------------TTT------GCT---GGGGACGCTCAGGAA---AATCTATCA------AGT---GCACCTGAAGGAGTT---CAG---TCA---GCT---TTT---AAA---ACAATG---AGATTAATTGTTTTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLQIVEFYLILAA---V-GAVAG-RV------------FWN-LLVASLVMLIAGYVGE---V------G--Y-----------V----------------------NV------WLA-FIVGMLGWIYILYAI-----F--A-GDAQE-NLS--S-APEGV-Q-S-A-F-K-TM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ929253 [unk-env8] PRGD_OTU093_97037492b9d8550c3d8685ed6acebe76 gb|KJ929253| PRGD_OTU093_97037492b9d8550c3d8685ed6acebe76, putative proteorhodopsin gene, partial cds. PRGD_OTU093_97037492b9d8550c3d8685ed6acebe76, putative proteorhodopsin gene, partial cds. KJ929253 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) ATCTTAACTGTACCATTACAAATCGTAGAATTCTATTTAATTCTTGCAGCAGTTGGAGCTGTTGCTGGCAGAGTATTCTGGAACTTACTAATAGCATCACTAGTTATGTTAATAGCAGGCTATGTTGGTGAAGTTGGCTATGTAAATGTATGGTTAGCATTCATTGTTGGTATGCTAGGATGGGTTTACATTCTATGGGCAATCTTTGCAGGTGACGCACAAGAGAATTTATCAAGTGCTCCTGAAGGTGTTCAGTCCGCATTTAGAACAATGAGATTGATCGTTTTAGTT ILTVPLQIVEFYLILAAVGAVAGRVFWNLLIASLVMLIAGYVGEVGYVNVWLAFIVGMLGWVYILWAIFAGDAQENLSSAPEGVQSAFRTMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAACTGTACCATTACAAATCGTAGAATTCTATTTAATTCTTGCAGCA---------GTT---GGAGCTGTTGCTGGC---AGAGTA------------------------------------TTCTGGAAC---TTACTAATAGCATCACTAGTTATGTTAATAGCAGGCTATGTTGGTGAA---------GTT------------------GGC------TAT---------------------------------GTA------------------------------------------------------------------AATGTA------------------TGGTTAGCA---TTCATTGTTGGTATGCTAGGATGGGTTTACATTCTATGGGCAATC---------------TTT------GCA---GGTGACGCACAAGAG---AATTTATCA------AGT---GCTCCTGAAGGTGTT---CAG---TCC---GCA---TTT---AGA---ACAATG---AGATTGATCGTTTTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLQIVEFYLILAA---V-GAVAG-RV------------FWN-LLIASLVMLIAGYVGE---V------G--Y-----------V----------------------NV------WLA-FIVGMLGWVYILWAI-----F--A-GDAQE-NLS--S-APEGV-Q-S-A-F-R-TM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ929250 [unk-env8] PRGD_OTU093_2aa1e8cd3cb6b6128acc28a754a2e7ce gb|KJ929250| PRGD_OTU093_2aa1e8cd3cb6b6128acc28a754a2e7ce, putative proteorhodopsin gene, partial cds. PRGD_OTU093_2aa1e8cd3cb6b6128acc28a754a2e7ce, putative proteorhodopsin gene, partial cds. KJ929250 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) ATTATAACTGTTCCACTCCAAATCGTTGAATTTTACCTAATTTTAGCTGCAGTAGGAGCAGTCGCTGGTAGAGTTTTTTGGAACCTGCTAATTGCTTCTTTAGTCATGCTTATCGCAGGATATTGTGGTGAAGTTGGATATGTAAACGTTTGGGTAGGCTTTATAATTGGAATGCTCGGTTGGATTTACATTCTTTATGCTATCTTTGCTGGAGATGCTCAAGAAAGATTGTCTGAAGCTCCAGAAGGTGTTCAAAATGCTTTTAAAACAATGAGATTGATTGTTTTAGTT IITVPLQIVEFYLILAAVGAVAGRVFWNLLIASLVMLIAGYCGEVGYVNVWVGFIIGMLGWIYILYAIFAGDAQERLSEAPEGVQNAFKTMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTATAACTGTTCCACTCCAAATCGTTGAATTTTACCTAATTTTAGCTGCA---------GTA---GGAGCAGTCGCTGGT---AGAGTT------------------------------------TTTTGGAAC---CTGCTAATTGCTTCTTTAGTCATGCTTATCGCAGGATATTGTGGTGAA---------GTT------------------GGA------TAT---------------------------------GTA------------------------------------------------------------------AACGTT------------------TGGGTAGGC---TTTATAATTGGAATGCTCGGTTGGATTTACATTCTTTATGCTATC---------------TTT------GCT---GGAGATGCTCAAGAA---AGATTGTCT------GAA---GCTCCAGAAGGTGTT---CAA---AAT---GCT---TTT---AAA---ACAATG---AGATTGATTGTTTTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQIVEFYLILAA---V-GAVAG-RV------------FWN-LLIASLVMLIAGYCGE---V------G--Y-----------V----------------------NV------WVG-FIIGMLGWIYILYAI-----F--A-GDAQE-RLS--E-APEGV-Q-N-A-F-K-TM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ929248 [unk-env8] PRGD_OTU093_otuREP_763a51a6de10bda35cbcae8477dd7a85 gb|KJ929248| PRGD_OTU093_otuREP_763a51a6de10bda35cbcae8477dd7a85, putative proteorhodopsin gene, partial cds. PRGD_OTU093_otuREP_763a51a6de10bda35cbcae8477dd7a85, putative proteorhodopsin gene, partial cds. KJ929248 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (33.762, 29.175), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) ATTATAACTGTTCCACTCCAAATAGTTGAATTTTACCTAATTTTAGCTGCAGTAGGAGCAGTCGCTGGTAGAGTTTTTTGGAACTTGCTAATTGCTTCTTTAGTCATGCTAATCGCAGGATATTGTGGTGAAGTTGGATATGTAAACGTTTGGGTAGGCTTTATAATTGGAATGCTCGGTTGGATTTACATTCTTTATGCTATCTTTGCTGGAGATGCTCAAGAAAGATTATCTGAAGCTCCAGAAGGTGTCCAAAATGCTTTTAAAACAATGAGATTGATTGTTTTAGTT IITVPLQIVEFYLILAAVGAVAGRVFWNLLIASLVMLIAGYCGEVGYVNVWVGFIIGMLGWIYILYAIFAGDAQERLSEAPEGVQNAFKTMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTATAACTGTTCCACTCCAAATAGTTGAATTTTACCTAATTTTAGCTGCA---------GTA---GGAGCAGTCGCTGGT---AGAGTT------------------------------------TTTTGGAAC---TTGCTAATTGCTTCTTTAGTCATGCTAATCGCAGGATATTGTGGTGAA---------GTT------------------GGA------TAT---------------------------------GTA------------------------------------------------------------------AACGTT------------------TGGGTAGGC---TTTATAATTGGAATGCTCGGTTGGATTTACATTCTTTATGCTATC---------------TTT------GCT---GGAGATGCTCAAGAA---AGATTATCT------GAA---GCTCCAGAAGGTGTC---CAA---AAT---GCT---TTT---AAA---ACAATG---AGATTGATTGTTTTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQIVEFYLILAA---V-GAVAG-RV------------FWN-LLIASLVMLIAGYCGE---V------G--Y-----------V----------------------NV------WVG-FIIGMLGWIYILYAI-----F--A-GDAQE-RLS--E-APEGV-Q-N-A-F-K-TM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ929249 [unk-env8] PRGD_OTU093_226319610c34b2aa9eed72f3af87b6c7 gb|KJ929249| PRGD_OTU093_226319610c34b2aa9eed72f3af87b6c7, putative proteorhodopsin gene, partial cds. PRGD_OTU093_226319610c34b2aa9eed72f3af87b6c7, putative proteorhodopsin gene, partial cds. KJ929249 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) ATTATAACTGTTCCACTCCAAATCGTTGAATTTTACCTAATTTTAGCTGCAGTAGGTGCAGTCGCTGGTAGAGTTTTTTGGAACCTGCTAATTGCTTCTTTAGTCATGCTCATAGCTGGATATTGTGGTGAAGTTGGATATGTAAACGTTTGGGTAGGCTTTATAATTGGAATGCTCGGTTGGATTTACATTCTTTATGCTATCTTTGCTGGAGATGCTCAAGAAAGATTATCTGAAGCACCAGAAGGTGTTCAAAATGCTTTTAAAACAATGAGATTGATTGTTTTAGTT IITVPLQIVEFYLILAAVGAVAGRVFWNLLIASLVMLIAGYCGEVGYVNVWVGFIIGMLGWIYILYAIFAGDAQERLSEAPEGVQNAFKTMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTATAACTGTTCCACTCCAAATCGTTGAATTTTACCTAATTTTAGCTGCA---------GTA---GGTGCAGTCGCTGGT---AGAGTT------------------------------------TTTTGGAAC---CTGCTAATTGCTTCTTTAGTCATGCTCATAGCTGGATATTGTGGTGAA---------GTT------------------GGA------TAT---------------------------------GTA------------------------------------------------------------------AACGTT------------------TGGGTAGGC---TTTATAATTGGAATGCTCGGTTGGATTTACATTCTTTATGCTATC---------------TTT------GCT---GGAGATGCTCAAGAA---AGATTATCT------GAA---GCACCAGAAGGTGTT---CAA---AAT---GCT---TTT---AAA---ACAATG---AGATTGATTGTTTTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQIVEFYLILAA---V-GAVAG-RV------------FWN-LLIASLVMLIAGYCGE---V------G--Y-----------V----------------------NV------WVG-FIIGMLGWIYILYAI-----F--A-GDAQE-RLS--E-APEGV-Q-N-A-F-K-TM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ929252 [unk-env8] PRGD_OTU093_7e0c0f8ac0669de3f668509b01d5da85 gb|KJ929252| PRGD_OTU093_7e0c0f8ac0669de3f668509b01d5da85, putative proteorhodopsin gene, partial cds. PRGD_OTU093_7e0c0f8ac0669de3f668509b01d5da85, putative proteorhodopsin gene, partial cds. KJ929252 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) ATTATAACTGTTCCACTTCAAATCGTTGAATTTTATCTAATTTTAGCTGCAGTGGGAGCAGTTGCTGGTAGAGTTTTTTGGAATCTACTAATTGCATCTTTAGTTATGCTTATCGCAGGATATTGTGGTGAAGTTGGATATGTAAACGTCTGGGTAGGCTTTATAATTGGAATGCTCGGTTGGATTTACATTCTTTATGCTATATTTGCTGGTGATGCTCAAGAAAGATTATCTGAAGCTCCAGAAGGTGTTCAAAATGCTTTTAAAACAATGAGATTGATTGTTTTAGTT IITVPLQIVEFYLILAAVGAVAGRVFWNLLIASLVMLIAGYCGEVGYVNVWVGFIIGMLGWIYILYAIFAGDAQERLSEAPEGVQNAFKTMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTATAACTGTTCCACTTCAAATCGTTGAATTTTATCTAATTTTAGCTGCA---------GTG---GGAGCAGTTGCTGGT---AGAGTT------------------------------------TTTTGGAAT---CTACTAATTGCATCTTTAGTTATGCTTATCGCAGGATATTGTGGTGAA---------GTT------------------GGA------TAT---------------------------------GTA------------------------------------------------------------------AACGTC------------------TGGGTAGGC---TTTATAATTGGAATGCTCGGTTGGATTTACATTCTTTATGCTATA---------------TTT------GCT---GGTGATGCTCAAGAA---AGATTATCT------GAA---GCTCCAGAAGGTGTT---CAA---AAT---GCT---TTT---AAA---ACAATG---AGATTGATTGTTTTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQIVEFYLILAA---V-GAVAG-RV------------FWN-LLIASLVMLIAGYCGE---V------G--Y-----------V----------------------NV------WVG-FIIGMLGWIYILYAI-----F--A-GDAQE-RLS--E-APEGV-Q-N-A-F-K-TM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ929251 [unk-env8] PRGD_OTU093_354942670c392f984548f26890ee3acb gb|KJ929251| PRGD_OTU093_354942670c392f984548f26890ee3acb, putative proteorhodopsin gene, partial cds. PRGD_OTU093_354942670c392f984548f26890ee3acb, putative proteorhodopsin gene, partial cds. KJ929251 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (33.762, 29.175), Indian Ocean (-33.28, 45.35) ATTATAACTGTTCCACTCCAAATCGTTGAATTTTATCTAATTTTAGCTGCTGTAGGAGCAGTGGCTGGTAGAGTTTTTTGGAATCTACTAATTGCTTCTTTAGTTATGCTTATCGCAGGATATTGTGGTGAAGTTGGATATGTAAATGTTTGGGTAGGCTTTATAATTGGAATGCTCGGTTGGATTTACATTCTTTATGCTATATTTGCTGGTGATGCTCAAGAAAGATTATCTGAAGCTCCAGAAGGTGTTCAAAATGCTTTTAAAACAATGAGATTGATTGTTTTAGTT IITVPLQIVEFYLILAAVGAVAGRVFWNLLIASLVMLIAGYCGEVGYVNVWVGFIIGMLGWIYILYAIFAGDAQERLSEAPEGVQNAFKTMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTATAACTGTTCCACTCCAAATCGTTGAATTTTATCTAATTTTAGCTGCT---------GTA---GGAGCAGTGGCTGGT---AGAGTT------------------------------------TTTTGGAAT---CTACTAATTGCTTCTTTAGTTATGCTTATCGCAGGATATTGTGGTGAA---------GTT------------------GGA------TAT---------------------------------GTA------------------------------------------------------------------AATGTT------------------TGGGTAGGC---TTTATAATTGGAATGCTCGGTTGGATTTACATTCTTTATGCTATA---------------TTT------GCT---GGTGATGCTCAAGAA---AGATTATCT------GAA---GCTCCAGAAGGTGTT---CAA---AAT---GCT---TTT---AAA---ACAATG---AGATTGATTGTTTTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQIVEFYLILAA---V-GAVAG-RV------------FWN-LLIASLVMLIAGYCGE---V------G--Y-----------V----------------------NV------WVG-FIIGMLGWIYILYAI-----F--A-GDAQE-RLS--E-APEGV-Q-N-A-F-K-TM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ929468 [unk-env8] PRGD_OTU131_06c8cf2cf6a26b5d879332bf1e76cb94 gb|KJ929468| PRGD_OTU131_06c8cf2cf6a26b5d879332bf1e76cb94, putative proteorhodopsin gene, partial cds. PRGD_OTU131_06c8cf2cf6a26b5d879332bf1e76cb94, putative proteorhodopsin gene, partial cds. KJ929468 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) ATAATAACAGTTCCTCTTCAGATTATCGAATTTTATTTGATTTTAGCCGCCGTGGGAGCCGTAGCAGGCCGAGTTTTCTGGAACCTTCTAGTGGCATCTTTGGTGATGTTGATATTTGGTTACTTAGGAGAAGTCGGTTATATGAATGTTTGGTTAGCGTTTGTAATCGGAATGGCAGGATGGCTCTATATCATATGGGCGATTTTTGCAGGAGACGCACAAGCAAACTTAGCAGATGCGCCTGAAGGTGTACAATCAGCGTTTAAAACGATGAGGCTGATAGTCTTAGTA IITVPLQIIEFYLILAAVGAVAGRVFWNLLVASLVMLIFGYLGEVGYMNVWLAFVIGMAGWLYIIWAIFAGDAQANLADAPEGVQSAFKTMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATAACAGTTCCTCTTCAGATTATCGAATTTTATTTGATTTTAGCCGCC---------GTG---GGAGCCGTAGCAGGC---CGAGTT------------------------------------TTCTGGAAC---CTTCTAGTGGCATCTTTGGTGATGTTGATATTTGGTTACTTAGGAGAA---------GTC------------------GGT------TAT---------------------------------ATG------------------------------------------------------------------AATGTT------------------TGGTTAGCG---TTTGTAATCGGAATGGCAGGATGGCTCTATATCATATGGGCGATT---------------TTT------GCA---GGAGACGCACAAGCA---AACTTAGCA------GAT---GCGCCTGAAGGTGTA---CAA---TCA---GCG---TTT---AAA---ACGATG---AGGCTGATAGTCTTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQIIEFYLILAA---V-GAVAG-RV------------FWN-LLVASLVMLIFGYLGE---V------G--Y-----------M----------------------NV------WLA-FVIGMAGWLYIIWAI-----F--A-GDAQA-NLA--D-APEGV-Q-S-A-F-K-TM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ929467 [unk-env8] PRGD_OTU131_otuREP_7676b8ae68639949535f769c2d0fb74e gb|KJ929467| PRGD_OTU131_otuREP_7676b8ae68639949535f769c2d0fb74e, putative proteorhodopsin gene, partial cds. PRGD_OTU131_otuREP_7676b8ae68639949535f769c2d0fb74e, putative proteorhodopsin gene, partial cds. KJ929467 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) ATAATAACAGTTCCTCTTCAGATTATCGAATTTTATTTGATTTTAGCCGCCGTGGGAGCCGTAGCAGGCCGAGTTTTCTGGAACCTTCTAGTGGCATCTTTGGTGATGTTGATATTTGGTTACTTAGGAGAAGTCGGTTATATGAATGTTTGGTTAGCGTTTGTAATCGGAATGGCAGGATGGCTCTATATCATATGGGCAATTTTTGCAGGAGATGCTCAAGCAAACTTAGCAGATGCGCCTGAAGGCGTACAATCAGCGTTTAAAACGATGAGGCTGATAGTCTTAGTT IITVPLQIIEFYLILAAVGAVAGRVFWNLLVASLVMLIFGYLGEVGYMNVWLAFVIGMAGWLYIIWAIFAGDAQANLADAPEGVQSAFKTMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATAACAGTTCCTCTTCAGATTATCGAATTTTATTTGATTTTAGCCGCC---------GTG---GGAGCCGTAGCAGGC---CGAGTT------------------------------------TTCTGGAAC---CTTCTAGTGGCATCTTTGGTGATGTTGATATTTGGTTACTTAGGAGAA---------GTC------------------GGT------TAT---------------------------------ATG------------------------------------------------------------------AATGTT------------------TGGTTAGCG---TTTGTAATCGGAATGGCAGGATGGCTCTATATCATATGGGCAATT---------------TTT------GCA---GGAGATGCTCAAGCA---AACTTAGCA------GAT---GCGCCTGAAGGCGTA---CAA---TCA---GCG---TTT---AAA---ACGATG---AGGCTGATAGTCTTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQIIEFYLILAA---V-GAVAG-RV------------FWN-LLVASLVMLIFGYLGE---V------G--Y-----------M----------------------NV------WLA-FVIGMAGWLYIIWAI-----F--A-GDAQA-NLA--D-APEGV-Q-S-A-F-K-TM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ929469 [unk-env8] PRGD_OTU131_49fd0063764da7d9e6dbb18500b26492 gb|KJ929469| PRGD_OTU131_49fd0063764da7d9e6dbb18500b26492, putative proteorhodopsin gene, partial cds. PRGD_OTU131_49fd0063764da7d9e6dbb18500b26492, putative proteorhodopsin gene, partial cds. KJ929469 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) ATAATAACAGTTCCTCTTCAGATTATCGAATTTTATCTGATTTTAGCCGCTGTGGGAGCAGTAGCAGGTCGGGTTTTCTGGAACCTTTTAGTGGCATCTTTGGTGATGTTGATATTTGGTTACTTGGGAGAAGTCGGTTATATGAATGTTTGGTTAGCATTTGTAATCGGAATGGCAGGATGGCTCTATATCATATGGGCGATTTTTGCAGGAGATGCACAAGCAAACTTAGCAGATGCGCCCGAAGGTGTACAATCAGCGTTTAAAACGATGAGGCTGATAGTCTTAGTT IITVPLQIIEFYLILAAVGAVAGRVFWNLLVASLVMLIFGYLGEVGYMNVWLAFVIGMAGWLYIIWAIFAGDAQANLADAPEGVQSAFKTMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATAACAGTTCCTCTTCAGATTATCGAATTTTATCTGATTTTAGCCGCT---------GTG---GGAGCAGTAGCAGGT---CGGGTT------------------------------------TTCTGGAAC---CTTTTAGTGGCATCTTTGGTGATGTTGATATTTGGTTACTTGGGAGAA---------GTC------------------GGT------TAT---------------------------------ATG------------------------------------------------------------------AATGTT------------------TGGTTAGCA---TTTGTAATCGGAATGGCAGGATGGCTCTATATCATATGGGCGATT---------------TTT------GCA---GGAGATGCACAAGCA---AACTTAGCA------GAT---GCGCCCGAAGGTGTA---CAA---TCA---GCG---TTT---AAA---ACGATG---AGGCTGATAGTCTTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQIIEFYLILAA---V-GAVAG-RV------------FWN-LLVASLVMLIFGYLGE---V------G--Y-----------M----------------------NV------WLA-FVIGMAGWLYIIWAI-----F--A-GDAQA-NLA--D-APEGV-Q-S-A-F-K-TM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ929470 [unk-env8] PRGD_OTU131_60fc0a4e00b89ca1455a50eba3ec6e47 gb|KJ929470| PRGD_OTU131_60fc0a4e00b89ca1455a50eba3ec6e47, putative proteorhodopsin gene, partial cds. PRGD_OTU131_60fc0a4e00b89ca1455a50eba3ec6e47, putative proteorhodopsin gene, partial cds. KJ929470 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), Indian Ocean (-35.05, 23.73) ATTATAACAGTTCCTCTTCAAATTATAGAATTTTACTTAATTCTAGCAGCAGTTGGCGCCGTCGCGGGCCGTGTATTCTGGAATCTTTTAATAGCTTCATTAGTAATGTTGATTTTTGGTTATTTAGGAGAAGTTGGATATATGAATGTTTGGTTAGCATTTATCATCGGAATGGCAGGTTGGGTCTATATTATATGGGCAATTTTTGCTGGAGATGCACAGGCCAATCTATCGGAAGCTCCGGAAGGGGTACAATCAGCCTTTAAGACGATGCGGCTCATAGTTTTAGTT IITVPLQIIEFYLILAAVGAVAGRVFWNLLIASLVMLIFGYLGEVGYMNVWLAFIIGMAGWVYIIWAIFAGDAQANLSEAPEGVQSAFKTMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTATAACAGTTCCTCTTCAAATTATAGAATTTTACTTAATTCTAGCAGCA---------GTT---GGCGCCGTCGCGGGC---CGTGTA------------------------------------TTCTGGAAT---CTTTTAATAGCTTCATTAGTAATGTTGATTTTTGGTTATTTAGGAGAA---------GTT------------------GGA------TAT---------------------------------ATG------------------------------------------------------------------AATGTT------------------TGGTTAGCA---TTTATCATCGGAATGGCAGGTTGGGTCTATATTATATGGGCAATT---------------TTT------GCT---GGAGATGCACAGGCC---AATCTATCG------GAA---GCTCCGGAAGGGGTA---CAA---TCA---GCC---TTT---AAG---ACGATG---CGGCTCATAGTTTTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQIIEFYLILAA---V-GAVAG-RV------------FWN-LLIASLVMLIFGYLGE---V------G--Y-----------M----------------------NV------WLA-FIIGMAGWVYIIWAI-----F--A-GDAQA-NLS--E-APEGV-Q-S-A-F-K-TM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ929471 [unk-env8] PRGD_OTU131_7ac7b5b0e68bddddaa2f5f9b4cc4fd72 gb|KJ929471| PRGD_OTU131_7ac7b5b0e68bddddaa2f5f9b4cc4fd72, putative proteorhodopsin gene, partial cds. PRGD_OTU131_7ac7b5b0e68bddddaa2f5f9b4cc4fd72, putative proteorhodopsin gene, partial cds. KJ929471 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (72.0542, -130.8781) ATTATCACAGTTCCCCTACAAATCATAGAGTTTTACTTGATTTTAGCAGCAGTTGGAGCGGTAGCTGGACGTGTTTTCTGGAATTTATTAGCAGCATCACTTGTTATGTTGGTGTTTGGATATCTGGGAGAAGTTGGTTATATGAATGTTTGGTTGGCGTTTGCTATTGGCATGGCTGGCTGGCTATATATCCTTTGGGCAATTTTTGCAGGGGATGCACAAGCAAATCTAGCAGATGCCCCTGAGGGTGTTCAATCAGCATTTAAAACTATGAGACTTATAGTTTTAGTT IITVPLQIIEFYLILAAVGAVAGRVFWNLLAASLVMLVFGYLGEVGYMNVWLAFAIGMAGWLYILWAIFAGDAQANLADAPEGVQSAFKTMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTATCACAGTTCCCCTACAAATCATAGAGTTTTACTTGATTTTAGCAGCA---------GTT---GGAGCGGTAGCTGGA---CGTGTT------------------------------------TTCTGGAAT---TTATTAGCAGCATCACTTGTTATGTTGGTGTTTGGATATCTGGGAGAA---------GTT------------------GGT------TAT---------------------------------ATG------------------------------------------------------------------AATGTT------------------TGGTTGGCG---TTTGCTATTGGCATGGCTGGCTGGCTATATATCCTTTGGGCAATT---------------TTT------GCA---GGGGATGCACAAGCA---AATCTAGCA------GAT---GCCCCTGAGGGTGTT---CAA---TCA---GCA---TTT---AAA---ACTATG---AGACTTATAGTTTTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQIIEFYLILAA---V-GAVAG-RV------------FWN-LLAASLVMLVFGYLGE---V------G--Y-----------M----------------------NV------WLA-FAIGMAGWLYILWAI-----F--A-GDAQA-NLA--D-APEGV-Q-S-A-F-K-TM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env8]_KJ929806 [unk-env8] PRGD_OTU257_otuREP_027c4cb126c312e196cdd362acc16d17 gb|KJ929806| PRGD_OTU257_otuREP_027c4cb126c312e196cdd362acc16d17, putative proteorhodopsin gene, partial cds. PRGD_OTU257_otuREP_027c4cb126c312e196cdd362acc16d17, putative proteorhodopsin gene, partial cds. KJ929806 [[proteorhodopsin/env cluster 8]] proteorhodopsin env cluster 8 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) ATTATCACGGTACCACTTCAAATAATTGAGTTCTACCTAATATTGGCAGCGGTTGGAGCTGTTGCTGGCGGCGTCTTCATGAGGCTAATGCTTGCCTCCCTCATCATGTTGATTGCAGGCTATCTTGGCGAAGCTGGTTACGTTAATGTTTGGTTGGGATTCGTTATAGGCATGGCGGCTTGGATATATATCATTTTCCAAATCTTTGCAGGGGATGCGCAGTCTCGTCTCGCCGAAGCGCCGGAGGGTGTTCAATCAGCCTATAAAACAATGCGCCTAATTGTTTTAGTG IITVPLQIIEFYLILAAVGAVAGGVFMRLMLASLIMLIAGYLGEAGYVNVWLGFVIGMAAWIYIIFQIFAGDAQSRLAEAPEGVQSAYKTMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTATCACGGTACCACTTCAAATAATTGAGTTCTACCTAATATTGGCAGCG---------GTT---GGAGCTGTTGCTGGC---GGCGTC------------------------------------TTCATGAGG---CTAATGCTTGCCTCCCTCATCATGTTGATTGCAGGCTATCTTGGCGAA---------GCT------------------GGT------TAC---------------------------------GTT------------------------------------------------------------------AATGTT------------------TGGTTGGGA---TTCGTTATAGGCATGGCGGCTTGGATATATATCATTTTCCAAATC---------------TTT------GCA---GGGGATGCGCAGTCT---CGTCTCGCC------GAA---GCGCCGGAGGGTGTT---CAA---TCA---GCC---TAT---AAA---ACAATG---CGCCTAATTGTTTTAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IITVPLQIIEFYLILAA---V-GAVAG-GV------------FMR-LMLASLIMLIAGYLGE---A------G--Y-----------V----------------------NV------WLG-FVIGMAAWIYIIFQI-----F--A-GDAQS-RLA--E-APEGV-Q-S-A-Y-K-TM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928382 [unk-Proteo2-Glaciecola] PRGD_OTU034_123c8d982344e9a1d7a73b2452be8be8 gb|KJ928382| PRGD_OTU034_123c8d982344e9a1d7a73b2452be8be8, putative proteorhodopsin gene, partial cds. PRGD_OTU034_123c8d982344e9a1d7a73b2452be8be8, putative proteorhodopsin gene, partial cds. KJ928382 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTCCTTACAGTACCACTTCAATTCGTTGAGTTTTACTTGATTCTAGCCGCCATAACTGTCGTTAGCGCTGGCCTTTTCTGGAAACTGATGATTGCATCCATTGCTATGCTCGTTTTCGGCTTTATCGGAGAAATGGGCACTATGCCAATGCCGATGGGTATTCTAGGAATGCTGGCTTGGATCTATATCCTCTACGAGATCTTTGCCGGTGAAGCGAGCAAGGTCAACGCGGCAAGTGGAAACGCTGCCAGCCAGCGCGCTTACAATGCCTTAAAATGGATTGTTTCAGTA LLTVPLQFVEFYLILAAITVVSAGLFWKLMIASIAMLVFGFIGEMGTMPMPMGILGMLAWIYILYEIFAGEASKVNAASGNAASQRAYNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTTACAGTACCACTTCAATTCGTTGAGTTTTACTTGATTCTAGCCGCC---------ATA---ACTGTCGTTAGCGCT---GGCCTT------------------------------------TTCTGGAAA---CTGATGATTGCATCCATTGCTATGCTCGTTTTCGGCTTTATCGGAGAA---------ATG------------------GGC------ACT---------------------------------ATG------------------------------------------------------------------CCAATG------------------CCGATGGGT------ATTCTAGGAATGCTGGCTTGGATCTATATCCTCTACGAGATC---------------TTT------GCC---GGTGAAGCGAGCAAGGTCAACGCGGCA------AGT---GGAAACGCTGCCAGC---CAG---CGC---GCT---TAC---AAT---GCCTTA---AAATGGATTGTTTCAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQFVEFYLILAA---I-TVVSA-GL------------FWK-LMIASIAMLVFGFIGE---M------G--T-----------M----------------------PM------PMG--ILGMLAWIYILYEI-----F--A-GEASKVNAA--S-GNAAS-Q-R-A-Y-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928388 [unk-Proteo2-Glaciecola] PRGD_OTU034_8c9bfaed9fc0fdcfbd6c4720217d338e gb|KJ928388| PRGD_OTU034_8c9bfaed9fc0fdcfbd6c4720217d338e, putative proteorhodopsin gene, partial cds. PRGD_OTU034_8c9bfaed9fc0fdcfbd6c4720217d338e, putative proteorhodopsin gene, partial cds. KJ928388 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTCCTTACAGTACCACTTCAATTCGTTGAGTTTTACTTGATTCTAGCCGCCATAACTGTTGTTAGCGCTGGCCTGTTCTGGAAACTGATGATTGCATCCATTGCTATGCTCGTTTTCGGCTTTATCGGAGAAATGGGCACTATGCCAATGCCAATGGGTATTCTAGGAATGCTGGCTTGGATCTATATCCTCTACGAGATCTTTGCCGGTGAAGCGAGCAAGGTCAACGCGGCAAGTGGAAACGCTGCCAGCCAGCGCGCTTACAATGCCTTAAAATGGATTGTTTCTGTA LLTVPLQFVEFYLILAAITVVSAGLFWKLMIASIAMLVFGFIGEMGTMPMPMGILGMLAWIYILYEIFAGEASKVNAASGNAASQRAYNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTTACAGTACCACTTCAATTCGTTGAGTTTTACTTGATTCTAGCCGCC---------ATA---ACTGTTGTTAGCGCT---GGCCTG------------------------------------TTCTGGAAA---CTGATGATTGCATCCATTGCTATGCTCGTTTTCGGCTTTATCGGAGAA---------ATG------------------GGC------ACT---------------------------------ATG------------------------------------------------------------------CCAATG------------------CCAATGGGT------ATTCTAGGAATGCTGGCTTGGATCTATATCCTCTACGAGATC---------------TTT------GCC---GGTGAAGCGAGCAAGGTCAACGCGGCA------AGT---GGAAACGCTGCCAGC---CAG---CGC---GCT---TAC---AAT---GCCTTA---AAATGGATTGTTTCTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQFVEFYLILAA---I-TVVSA-GL------------FWK-LMIASIAMLVFGFIGE---M------G--T-----------M----------------------PM------PMG--ILGMLAWIYILYEI-----F--A-GEASKVNAA--S-GNAAS-Q-R-A-Y-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928391 [unk-Proteo2-Glaciecola] PRGD_OTU034_b836083c8900694d7280e13a2265a611 gb|KJ928391| PRGD_OTU034_b836083c8900694d7280e13a2265a611, putative proteorhodopsin gene, partial cds. PRGD_OTU034_b836083c8900694d7280e13a2265a611, putative proteorhodopsin gene, partial cds. KJ928391 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTCCTTACAGTACCACTTCAATTTGTTGAGTTTTACTTGATTCTAGCCGCCATAACTGTCGTTAGCGCTGGCCTTTTCTGGAAACTGATGATTGCATCCATTGCTATGCTTGTTTTCGGCTTTATCGGAGAAATGGGCACTATGCCAATGCCGATGGGTATTCTAGGAATGCTGGCTTGGATCTATATCCTCTACGAGATCTTTGCCGGTGAAGCGAGCAAGGTCAACGCGGCAAGTGGAAACGCTGCCAGCCAGCGGGCTTACAATGCCTTAAAATGGATTGTTTCTGTA LLTVPLQFVEFYLILAAITVVSAGLFWKLMIASIAMLVFGFIGEMGTMPMPMGILGMLAWIYILYEIFAGEASKVNAASGNAASQRAYNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTTACAGTACCACTTCAATTTGTTGAGTTTTACTTGATTCTAGCCGCC---------ATA---ACTGTCGTTAGCGCT---GGCCTT------------------------------------TTCTGGAAA---CTGATGATTGCATCCATTGCTATGCTTGTTTTCGGCTTTATCGGAGAA---------ATG------------------GGC------ACT---------------------------------ATG------------------------------------------------------------------CCAATG------------------CCGATGGGT------ATTCTAGGAATGCTGGCTTGGATCTATATCCTCTACGAGATC---------------TTT------GCC---GGTGAAGCGAGCAAGGTCAACGCGGCA------AGT---GGAAACGCTGCCAGC---CAG---CGG---GCT---TAC---AAT---GCCTTA---AAATGGATTGTTTCTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQFVEFYLILAA---I-TVVSA-GL------------FWK-LMIASIAMLVFGFIGE---M------G--T-----------M----------------------PM------PMG--ILGMLAWIYILYEI-----F--A-GEASKVNAA--S-GNAAS-Q-R-A-Y-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928386 [unk-Proteo2-Glaciecola] PRGD_OTU034_529241c924b3dc9a953c3adfd7f8361f gb|KJ928386| PRGD_OTU034_529241c924b3dc9a953c3adfd7f8361f, putative proteorhodopsin gene, partial cds. PRGD_OTU034_529241c924b3dc9a953c3adfd7f8361f, putative proteorhodopsin gene, partial cds. KJ928386 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) CTCCTTACAGTACCACTTCAATTCGTTGAGTTTTACTTGATTCTAGCCGCCATAACTGTCGTTAGCGCTGGCCTTTTCTGGAAACTGATGATTGCATCCATTGCTATGCTCGTTTTCGGCTTTATCGGAGAAATGGGCACTATGCCAATGCCGATGGGTATTCTAGGAATGCTGGCTTGGATCTACATCCTCTACGAGATCTTTGCCGGTGAAGCGAGCAAGGTCAACGCTGCAAGTGGAAACGCAGCCAGCCAGCGCGCTTACAATGCCCTTAAATGGATTGTTTCTGTA LLTVPLQFVEFYLILAAITVVSAGLFWKLMIASIAMLVFGFIGEMGTMPMPMGILGMLAWIYILYEIFAGEASKVNAASGNAASQRAYNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTTACAGTACCACTTCAATTCGTTGAGTTTTACTTGATTCTAGCCGCC---------ATA---ACTGTCGTTAGCGCT---GGCCTT------------------------------------TTCTGGAAA---CTGATGATTGCATCCATTGCTATGCTCGTTTTCGGCTTTATCGGAGAA---------ATG------------------GGC------ACT---------------------------------ATG------------------------------------------------------------------CCAATG------------------CCGATGGGT------ATTCTAGGAATGCTGGCTTGGATCTACATCCTCTACGAGATC---------------TTT------GCC---GGTGAAGCGAGCAAGGTCAACGCTGCA------AGT---GGAAACGCAGCCAGC---CAG---CGC---GCT---TAC---AAT---GCCCTT---AAATGGATTGTTTCTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQFVEFYLILAA---I-TVVSA-GL------------FWK-LMIASIAMLVFGFIGE---M------G--T-----------M----------------------PM------PMG--ILGMLAWIYILYEI-----F--A-GEASKVNAA--S-GNAAS-Q-R-A-Y-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928392 [unk-Proteo2-Glaciecola] PRGD_OTU034_b8a8cd82cb078c002780f9bb3590f9ff gb|KJ928392| PRGD_OTU034_b8a8cd82cb078c002780f9bb3590f9ff, putative proteorhodopsin gene, partial cds. PRGD_OTU034_b8a8cd82cb078c002780f9bb3590f9ff, putative proteorhodopsin gene, partial cds. KJ928392 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTTCTTACAGTACCACTTCAATTCGTTGAGTTTTACTTGATTCTAGCCGCCATAACTGTCGTTAGCGCTGGCCTTTTCTGGAAACTGATGATTGCATCCATTGCTATGCTCGTTTTCGGCTTTATCGGAGAAATGGGCACTATGCCAATGCCGATGGGAATTCTAGGAATGCTGGCTTGGATCTATATCCTCTACGAGATCTTTGCCGGTGAAGCGAGCAAGGTCAACGCTGCAAGTGGAAACGCTGCCAGCCAGCGCGCTTACAATGCCCTAAAATGGATTGTTTCTGTA LLTVPLQFVEFYLILAAITVVSAGLFWKLMIASIAMLVFGFIGEMGTMPMPMGILGMLAWIYILYEIFAGEASKVNAASGNAASQRAYNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTTACAGTACCACTTCAATTCGTTGAGTTTTACTTGATTCTAGCCGCC---------ATA---ACTGTCGTTAGCGCT---GGCCTT------------------------------------TTCTGGAAA---CTGATGATTGCATCCATTGCTATGCTCGTTTTCGGCTTTATCGGAGAA---------ATG------------------GGC------ACT---------------------------------ATG------------------------------------------------------------------CCAATG------------------CCGATGGGA------ATTCTAGGAATGCTGGCTTGGATCTATATCCTCTACGAGATC---------------TTT------GCC---GGTGAAGCGAGCAAGGTCAACGCTGCA------AGT---GGAAACGCTGCCAGC---CAG---CGC---GCT---TAC---AAT---GCCCTA---AAATGGATTGTTTCTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQFVEFYLILAA---I-TVVSA-GL------------FWK-LMIASIAMLVFGFIGE---M------G--T-----------M----------------------PM------PMG--ILGMLAWIYILYEI-----F--A-GEASKVNAA--S-GNAAS-Q-R-A-Y-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928395 [unk-Proteo2-Glaciecola] PRGD_OTU034_f8359b62030fa1903921044cb5d2116f gb|KJ928395| PRGD_OTU034_f8359b62030fa1903921044cb5d2116f, putative proteorhodopsin gene, partial cds. PRGD_OTU034_f8359b62030fa1903921044cb5d2116f, putative proteorhodopsin gene, partial cds. KJ928395 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTCCTTACGGTACCACTTCAATTCGTTGAATTTTACTTGATTCTGGCCGCCATAACTGTCGTGAGCGCTGGCCTTTTCTGGAAACTAATGATTGCATCCATTGCTATGCTCGTTTTCGGCTTTATCGGAGAAATGGGCACTATGCCAATGCCGATGGGTATTCTAGGAATGCTGGCTTGGATCTATATCCTCTACGAGATCTTCGCCGGTGAAGCCAGCAAGGTCAACGCTGCAAGTGGAAACGCTGCCAGCCAGCGCGCTTACAATGCCTTAAAATGGATTGTTTCTGTA LLTVPLQFVEFYLILAAITVVSAGLFWKLMIASIAMLVFGFIGEMGTMPMPMGILGMLAWIYILYEIFAGEASKVNAASGNAASQRAYNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTTACGGTACCACTTCAATTCGTTGAATTTTACTTGATTCTGGCCGCC---------ATA---ACTGTCGTGAGCGCT---GGCCTT------------------------------------TTCTGGAAA---CTAATGATTGCATCCATTGCTATGCTCGTTTTCGGCTTTATCGGAGAA---------ATG------------------GGC------ACT---------------------------------ATG------------------------------------------------------------------CCAATG------------------CCGATGGGT------ATTCTAGGAATGCTGGCTTGGATCTATATCCTCTACGAGATC---------------TTC------GCC---GGTGAAGCCAGCAAGGTCAACGCTGCA------AGT---GGAAACGCTGCCAGC---CAG---CGC---GCT---TAC---AAT---GCCTTA---AAATGGATTGTTTCTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQFVEFYLILAA---I-TVVSA-GL------------FWK-LMIASIAMLVFGFIGE---M------G--T-----------M----------------------PM------PMG--ILGMLAWIYILYEI-----F--A-GEASKVNAA--S-GNAAS-Q-R-A-Y-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928390 [unk-Proteo2-Glaciecola] PRGD_OTU034_a929ef3f1992327832b92de1c378b4a3 gb|KJ928390| PRGD_OTU034_a929ef3f1992327832b92de1c378b4a3, putative proteorhodopsin gene, partial cds. PRGD_OTU034_a929ef3f1992327832b92de1c378b4a3, putative proteorhodopsin gene, partial cds. KJ928390 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTCCTTACAGTGCCACTTCAATTCGTCGAATTTTACTTGATTCTAGCCGCCATAACTGTCGTTAGCGCTGGCCTTTTCTGGAAACTAATGATTGCATCCATTGCTATGCTCGTTTTCGGCTTTATCGGAGAAATGGGCACCATGCCAATGCCGATGGGTATTCTAGGTATGCTGGCTTGGATCTATATCCTTTACGAGATCTTTGCCGGTGAAGCGAGCAAGGTCAACGCTGCAAGTGGAAACGCTGCCAGCCAGCGAGCTTACAATGCCTTAAAATGGATCGTTTCTGTA LLTVPLQFVEFYLILAAITVVSAGLFWKLMIASIAMLVFGFIGEMGTMPMPMGILGMLAWIYILYEIFAGEASKVNAASGNAASQRAYNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTTACAGTGCCACTTCAATTCGTCGAATTTTACTTGATTCTAGCCGCC---------ATA---ACTGTCGTTAGCGCT---GGCCTT------------------------------------TTCTGGAAA---CTAATGATTGCATCCATTGCTATGCTCGTTTTCGGCTTTATCGGAGAA---------ATG------------------GGC------ACC---------------------------------ATG------------------------------------------------------------------CCAATG------------------CCGATGGGT------ATTCTAGGTATGCTGGCTTGGATCTATATCCTTTACGAGATC---------------TTT------GCC---GGTGAAGCGAGCAAGGTCAACGCTGCA------AGT---GGAAACGCTGCCAGC---CAG---CGA---GCT---TAC---AAT---GCCTTA---AAATGGATCGTTTCTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQFVEFYLILAA---I-TVVSA-GL------------FWK-LMIASIAMLVFGFIGE---M------G--T-----------M----------------------PM------PMG--ILGMLAWIYILYEI-----F--A-GEASKVNAA--S-GNAAS-Q-R-A-Y-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928393 [unk-Proteo2-Glaciecola] PRGD_OTU034_def19353efc05df71af5176a0aaf12e4 gb|KJ928393| PRGD_OTU034_def19353efc05df71af5176a0aaf12e4, putative proteorhodopsin gene, partial cds. PRGD_OTU034_def19353efc05df71af5176a0aaf12e4, putative proteorhodopsin gene, partial cds. KJ928393 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTCCTTACAGTGCCACTTCAATTCGTCGAATTTTACTTGATTCTAGCCGCCATTACTGTTGTTAGCGCTGGCCTTTTCTGGAAACTAATGATTGCATCCATTGCGATGCTCGTTTTCGGCTTTATCGGAGAAATGGGCACCATGCCAATGCCGATGGGTATTCTAGGAATGCTGGCTTGGATCTATATCCTTTACGAGATCTTTGCCGGTGAAGCGAGCAAGGTCAACGCTGCAAGTGGAAACGCTGCCAGCCAGCGAGCTTACAATGCCTTAAAATGGATCGTTTCTGTA LLTVPLQFVEFYLILAAITVVSAGLFWKLMIASIAMLVFGFIGEMGTMPMPMGILGMLAWIYILYEIFAGEASKVNAASGNAASQRAYNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTTACAGTGCCACTTCAATTCGTCGAATTTTACTTGATTCTAGCCGCC---------ATT---ACTGTTGTTAGCGCT---GGCCTT------------------------------------TTCTGGAAA---CTAATGATTGCATCCATTGCGATGCTCGTTTTCGGCTTTATCGGAGAA---------ATG------------------GGC------ACC---------------------------------ATG------------------------------------------------------------------CCAATG------------------CCGATGGGT------ATTCTAGGAATGCTGGCTTGGATCTATATCCTTTACGAGATC---------------TTT------GCC---GGTGAAGCGAGCAAGGTCAACGCTGCA------AGT---GGAAACGCTGCCAGC---CAG---CGA---GCT---TAC---AAT---GCCTTA---AAATGGATCGTTTCTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQFVEFYLILAA---I-TVVSA-GL------------FWK-LMIASIAMLVFGFIGE---M------G--T-----------M----------------------PM------PMG--ILGMLAWIYILYEI-----F--A-GEASKVNAA--S-GNAAS-Q-R-A-Y-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928384 [unk-Proteo2-Glaciecola] PRGD_OTU034_262882719f6c0694d0a1663c2acb7f28 gb|KJ928384| PRGD_OTU034_262882719f6c0694d0a1663c2acb7f28, putative proteorhodopsin gene, partial cds. PRGD_OTU034_262882719f6c0694d0a1663c2acb7f28, putative proteorhodopsin gene, partial cds. KJ928384 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-14.48, 113.45; -33.28, 45.35) CTCCTTACAGTGCCACTTCAATTCGTCGAATTTTACTTGATTCTAGCCGCCATAACTGTCGTTAGCGCTGGCCTTTTCTGGAAACTAATGATTGCGTCCATTGCTATGCTCGTTTTCGGCTTTATCGGAGAAATGGGCACCATGCCAATGCCGATGGGTATTCTAGGAATGTTGGCTTGGATCTATATCCTCTACGAGATCTTTGCCGGTGAAGCGAGCAAGGTCAACGCTGCAAGTGGAAACGCTGCCAGCCAGCGAGCTTACAACGCCTTAAAATGGATCGTTTCTGTA LLTVPLQFVEFYLILAAITVVSAGLFWKLMIASIAMLVFGFIGEMGTMPMPMGILGMLAWIYILYEIFAGEASKVNAASGNAASQRAYNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTTACAGTGCCACTTCAATTCGTCGAATTTTACTTGATTCTAGCCGCC---------ATA---ACTGTCGTTAGCGCT---GGCCTT------------------------------------TTCTGGAAA---CTAATGATTGCGTCCATTGCTATGCTCGTTTTCGGCTTTATCGGAGAA---------ATG------------------GGC------ACC---------------------------------ATG------------------------------------------------------------------CCAATG------------------CCGATGGGT------ATTCTAGGAATGTTGGCTTGGATCTATATCCTCTACGAGATC---------------TTT------GCC---GGTGAAGCGAGCAAGGTCAACGCTGCA------AGT---GGAAACGCTGCCAGC---CAG---CGA---GCT---TAC---AAC---GCCTTA---AAATGGATCGTTTCTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQFVEFYLILAA---I-TVVSA-GL------------FWK-LMIASIAMLVFGFIGE---M------G--T-----------M----------------------PM------PMG--ILGMLAWIYILYEI-----F--A-GEASKVNAA--S-GNAAS-Q-R-A-Y-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928385 [unk-Proteo2-Glaciecola] PRGD_OTU034_339a6f167413f4f7c64a76fcb4e5f470 gb|KJ928385| PRGD_OTU034_339a6f167413f4f7c64a76fcb4e5f470, putative proteorhodopsin gene, partial cds. PRGD_OTU034_339a6f167413f4f7c64a76fcb4e5f470, putative proteorhodopsin gene, partial cds. KJ928385 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTCCTTACTGTGCCACTTCAATTCGTCGAATTTTACTTGATTCTAGCCGCCATAACTGTCGTTAGCGCTGGCCTTTTCTGGAAACTAATGATTGCATCCATTGCTATGCTCGTTTTCGGCTTTATCGGAGAAATGGGCACCATGCCAATGCCGATGGGTATTCTAGGAATGCTGGCTTGGATCTATATCCTCTACGAGATCTTTGCCGGTGAAGCGAGCAAGGTCAACGCTGCGAGTGGAAACGCTGCCAGCCAGCGAGCTTACAATGCCTTAAAATGGATCGTTTCTGTA LLTVPLQFVEFYLILAAITVVSAGLFWKLMIASIAMLVFGFIGEMGTMPMPMGILGMLAWIYILYEIFAGEASKVNAASGNAASQRAYNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTTACTGTGCCACTTCAATTCGTCGAATTTTACTTGATTCTAGCCGCC---------ATA---ACTGTCGTTAGCGCT---GGCCTT------------------------------------TTCTGGAAA---CTAATGATTGCATCCATTGCTATGCTCGTTTTCGGCTTTATCGGAGAA---------ATG------------------GGC------ACC---------------------------------ATG------------------------------------------------------------------CCAATG------------------CCGATGGGT------ATTCTAGGAATGCTGGCTTGGATCTATATCCTCTACGAGATC---------------TTT------GCC---GGTGAAGCGAGCAAGGTCAACGCTGCG------AGT---GGAAACGCTGCCAGC---CAG---CGA---GCT---TAC---AAT---GCCTTA---AAATGGATCGTTTCTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQFVEFYLILAA---I-TVVSA-GL------------FWK-LMIASIAMLVFGFIGE---M------G--T-----------M----------------------PM------PMG--ILGMLAWIYILYEI-----F--A-GEASKVNAA--S-GNAAS-Q-R-A-Y-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928381 [unk-Proteo2-Glaciecola] PRGD_OTU034_088f72e5ce528c2f74c7b92058980f72 gb|KJ928381| PRGD_OTU034_088f72e5ce528c2f74c7b92058980f72, putative proteorhodopsin gene, partial cds. PRGD_OTU034_088f72e5ce528c2f74c7b92058980f72, putative proteorhodopsin gene, partial cds. KJ928381 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTCCTTACAGTGCCACTTCAATTCGTTGAATTTTACTTGATTCTAGCGGCCATAACTGTCGTTAGCGCTGGCCTTTTCTGGAAACTAATGATTGCATCCATTGCTATGCTCGTTTTCGGCTTTATCGGAGAAATGGGCACCATGCCAATGCCGATGGGTATTCTAGGAATGCTGGCTTGGATCTATATCCTCTACGAGATCTTTGCCGGTGAAGCGAGCAAGGTCAACGCTGCAAGTGGAAACGCTGCCAGCCAGCGAGCTTACAATGCCTTAAAATGGATCGTTTCTGTA LLTVPLQFVEFYLILAAITVVSAGLFWKLMIASIAMLVFGFIGEMGTMPMPMGILGMLAWIYILYEIFAGEASKVNAASGNAASQRAYNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTTACAGTGCCACTTCAATTCGTTGAATTTTACTTGATTCTAGCGGCC---------ATA---ACTGTCGTTAGCGCT---GGCCTT------------------------------------TTCTGGAAA---CTAATGATTGCATCCATTGCTATGCTCGTTTTCGGCTTTATCGGAGAA---------ATG------------------GGC------ACC---------------------------------ATG------------------------------------------------------------------CCAATG------------------CCGATGGGT------ATTCTAGGAATGCTGGCTTGGATCTATATCCTCTACGAGATC---------------TTT------GCC---GGTGAAGCGAGCAAGGTCAACGCTGCA------AGT---GGAAACGCTGCCAGC---CAG---CGA---GCT---TAC---AAT---GCCTTA---AAATGGATCGTTTCTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQFVEFYLILAA---I-TVVSA-GL------------FWK-LMIASIAMLVFGFIGE---M------G--T-----------M----------------------PM------PMG--ILGMLAWIYILYEI-----F--A-GEASKVNAA--S-GNAAS-Q-R-A-Y-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928380 [unk-Proteo2-Glaciecola] PRGD_OTU034_otuREP_f00f1767014c34eeaa6e64ff4031bdc3 gb|KJ928380| PRGD_OTU034_otuREP_f00f1767014c34eeaa6e64ff4031bdc3, putative proteorhodopsin gene, partial cds. PRGD_OTU034_otuREP_f00f1767014c34eeaa6e64ff4031bdc3, putative proteorhodopsin gene, partial cds. KJ928380 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTCCTTACAGTACCACTTCAATTCGTTGAATTTTACTTAATTCTAGCCGCCATAACTGTCGTAAGCGCTGGCCTTTTCTGGAAACTAATGATTGCATCCATTGCCATGCTCGTTTTCGGCTTTATCGGAGAAATGGGCACCATGCCAATGCCGATGGGTATTCTAGGAATGCTGGCTTGGATCTATATCCTCTACGAGATCTTTGCTGGTGAAGCGAGTAAGGTCAACGCTGCAAGCGGAAACGCTGCCAGCCAGCGAGCTTACAATGCCTTAAAATGGATCGTTTCTGTA LLTVPLQFVEFYLILAAITVVSAGLFWKLMIASIAMLVFGFIGEMGTMPMPMGILGMLAWIYILYEIFAGEASKVNAASGNAASQRAYNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTTACAGTACCACTTCAATTCGTTGAATTTTACTTAATTCTAGCCGCC---------ATA---ACTGTCGTAAGCGCT---GGCCTT------------------------------------TTCTGGAAA---CTAATGATTGCATCCATTGCCATGCTCGTTTTCGGCTTTATCGGAGAA---------ATG------------------GGC------ACC---------------------------------ATG------------------------------------------------------------------CCAATG------------------CCGATGGGT------ATTCTAGGAATGCTGGCTTGGATCTATATCCTCTACGAGATC---------------TTT------GCT---GGTGAAGCGAGTAAGGTCAACGCTGCA------AGC---GGAAACGCTGCCAGC---CAG---CGA---GCT---TAC---AAT---GCCTTA---AAATGGATCGTTTCTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQFVEFYLILAA---I-TVVSA-GL------------FWK-LMIASIAMLVFGFIGE---M------G--T-----------M----------------------PM------PMG--ILGMLAWIYILYEI-----F--A-GEASKVNAA--S-GNAAS-Q-R-A-Y-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928394 [unk-Proteo2-Glaciecola] PRGD_OTU034_f2b0ff52607053d51bc2bd7fad8df9a3 gb|KJ928394| PRGD_OTU034_f2b0ff52607053d51bc2bd7fad8df9a3, putative proteorhodopsin gene, partial cds. PRGD_OTU034_f2b0ff52607053d51bc2bd7fad8df9a3, putative proteorhodopsin gene, partial cds. KJ928394 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) CTCCTTACAGTACCACTTCAATTCGTTGAATTTTACTTGATTCTAGCCGCCATAACTGTCGTTAGCGCTGGCCTTTTTTGGAAACTAATGATTGCATCCATAGCTATGCTCGTTTTCGGCTTTATCGGAGAAATGGGCACCATGCCAATGCCGATGGGTATTCTAGGAATGCTGGCTTGGATCTATATTCTCTACGAGATCTTTGCCGGTGAAGCGAGCAAGGTCAACGCTGCAAGTGGAAACGCTGCCAGTCAGCGAGCTTACAATGCTTTAAAATGGATCGTTTCTGTA LLTVPLQFVEFYLILAAITVVSAGLFWKLMIASIAMLVFGFIGEMGTMPMPMGILGMLAWIYILYEIFAGEASKVNAASGNAASQRAYNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTTACAGTACCACTTCAATTCGTTGAATTTTACTTGATTCTAGCCGCC---------ATA---ACTGTCGTTAGCGCT---GGCCTT------------------------------------TTTTGGAAA---CTAATGATTGCATCCATAGCTATGCTCGTTTTCGGCTTTATCGGAGAA---------ATG------------------GGC------ACC---------------------------------ATG------------------------------------------------------------------CCAATG------------------CCGATGGGT------ATTCTAGGAATGCTGGCTTGGATCTATATTCTCTACGAGATC---------------TTT------GCC---GGTGAAGCGAGCAAGGTCAACGCTGCA------AGT---GGAAACGCTGCCAGT---CAG---CGA---GCT---TAC---AAT---GCTTTA---AAATGGATCGTTTCTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQFVEFYLILAA---I-TVVSA-GL------------FWK-LMIASIAMLVFGFIGE---M------G--T-----------M----------------------PM------PMG--ILGMLAWIYILYEI-----F--A-GEASKVNAA--S-GNAAS-Q-R-A-Y-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928383 [unk-Proteo2-Glaciecola] PRGD_OTU034_1caec9ec6d89bdece053983688f7dbac gb|KJ928383| PRGD_OTU034_1caec9ec6d89bdece053983688f7dbac, putative proteorhodopsin gene, partial cds. PRGD_OTU034_1caec9ec6d89bdece053983688f7dbac, putative proteorhodopsin gene, partial cds. KJ928383 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTGCTTACAGTACCACTTCAATTCGTTGAATTTTACTTGATTCTAGCCGCCATAACTGTCGTTAGCGCTGGCCTTTTCTGGAAACTAATGATTGCATCCATTGCTATGCTCGTTTTCGGCTTTATCGGAGAAATGGGCACCATGCCGATGCCAATGGGTATTCTAGGAATGTTGGCTTGGATCTATATTCTCTATGAGATCTTTGCCGGTGAAGCGAGCAAGGTCAACGCTGCAAGTGGAAACGCTGCCAGCCAGCGAGCTTACAATGCCCTAAAATGGATCGTTTCTGTT LLTVPLQFVEFYLILAAITVVSAGLFWKLMIASIAMLVFGFIGEMGTMPMPMGILGMLAWIYILYEIFAGEASKVNAASGNAASQRAYNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTTACAGTACCACTTCAATTCGTTGAATTTTACTTGATTCTAGCCGCC---------ATA---ACTGTCGTTAGCGCT---GGCCTT------------------------------------TTCTGGAAA---CTAATGATTGCATCCATTGCTATGCTCGTTTTCGGCTTTATCGGAGAA---------ATG------------------GGC------ACC---------------------------------ATG------------------------------------------------------------------CCGATG------------------CCAATGGGT------ATTCTAGGAATGTTGGCTTGGATCTATATTCTCTATGAGATC---------------TTT------GCC---GGTGAAGCGAGCAAGGTCAACGCTGCA------AGT---GGAAACGCTGCCAGC---CAG---CGA---GCT---TAC---AAT---GCCCTA---AAATGGATCGTTTCTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQFVEFYLILAA---I-TVVSA-GL------------FWK-LMIASIAMLVFGFIGE---M------G--T-----------M----------------------PM------PMG--ILGMLAWIYILYEI-----F--A-GEASKVNAA--S-GNAAS-Q-R-A-Y-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928387 [unk-Proteo2-Glaciecola] PRGD_OTU034_53c98589a48d2ae9ff9563c0ad6b88df gb|KJ928387| PRGD_OTU034_53c98589a48d2ae9ff9563c0ad6b88df, putative proteorhodopsin gene, partial cds. PRGD_OTU034_53c98589a48d2ae9ff9563c0ad6b88df, putative proteorhodopsin gene, partial cds. KJ928387 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGCTTACAGTACCACTTCAATTCGTTGAATTTTACTTGATTCTAGCCGCCATAACTGTCGTTAGCGCTGGCCTTTTCTGGAAACTAATGATTGCATCCATTGCTATGCTCGTTTTCGGCTTTATCGGAGAAATGGGCACCATGCCAATGCCAATGGGTATTTTAGGAATGTTGGCTTGGATCTATATTCTCTATGAGATCTTTGCCGGTGAAGCGAGCAAGGTCAACGCTGCAAGTGGAAATGCTGCCAGCCAGCGAGCTTACAATGCCCTAAAATGGATCGTTTCTGTT LLTVPLQFVEFYLILAAITVVSAGLFWKLMIASIAMLVFGFIGEMGTMPMPMGILGMLAWIYILYEIFAGEASKVNAASGNAASQRAYNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTTACAGTACCACTTCAATTCGTTGAATTTTACTTGATTCTAGCCGCC---------ATA---ACTGTCGTTAGCGCT---GGCCTT------------------------------------TTCTGGAAA---CTAATGATTGCATCCATTGCTATGCTCGTTTTCGGCTTTATCGGAGAA---------ATG------------------GGC------ACC---------------------------------ATG------------------------------------------------------------------CCAATG------------------CCAATGGGT------ATTTTAGGAATGTTGGCTTGGATCTATATTCTCTATGAGATC---------------TTT------GCC---GGTGAAGCGAGCAAGGTCAACGCTGCA------AGT---GGAAATGCTGCCAGC---CAG---CGA---GCT---TAC---AAT---GCCCTA---AAATGGATCGTTTCTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQFVEFYLILAA---I-TVVSA-GL------------FWK-LMIASIAMLVFGFIGE---M------G--T-----------M----------------------PM------PMG--ILGMLAWIYILYEI-----F--A-GEASKVNAA--S-GNAAS-Q-R-A-Y-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928389 [unk-Proteo2-Glaciecola] PRGD_OTU034_9d6e082513f15aeb091f3c5b297af69c gb|KJ928389| PRGD_OTU034_9d6e082513f15aeb091f3c5b297af69c, putative proteorhodopsin gene, partial cds. PRGD_OTU034_9d6e082513f15aeb091f3c5b297af69c, putative proteorhodopsin gene, partial cds. KJ928389 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGCTTACAGTACCACTTCAATTCGTTGAATTTTACTTGATCCTAGCCGCCATAACTGTCGTTAGCGCTGGCCTTTTCTGGAAACTAATGATTGCATCCATTGCTATGCTCGTTTTCGGCTTTATCGGAGAAATGGGCACCATGCCAATGCCAATGGGCATTCTAGGAATGTTGGCTTGGATCTATATTCTCTATGAGATCTTTGCTGGTGAAGCGAGCAAGGTCAACGCTGCAAGTGGAAACGCTGCCAGCCAGCGAGCTTACAATGCCCTAAAATGGATCGTTTCTGTT LLTVPLQFVEFYLILAAITVVSAGLFWKLMIASIAMLVFGFIGEMGTMPMPMGILGMLAWIYILYEIFAGEASKVNAASGNAASQRAYNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTTACAGTACCACTTCAATTCGTTGAATTTTACTTGATCCTAGCCGCC---------ATA---ACTGTCGTTAGCGCT---GGCCTT------------------------------------TTCTGGAAA---CTAATGATTGCATCCATTGCTATGCTCGTTTTCGGCTTTATCGGAGAA---------ATG------------------GGC------ACC---------------------------------ATG------------------------------------------------------------------CCAATG------------------CCAATGGGC------ATTCTAGGAATGTTGGCTTGGATCTATATTCTCTATGAGATC---------------TTT------GCT---GGTGAAGCGAGCAAGGTCAACGCTGCA------AGT---GGAAACGCTGCCAGC---CAG---CGA---GCT---TAC---AAT---GCCCTA---AAATGGATCGTTTCTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQFVEFYLILAA---I-TVVSA-GL------------FWK-LMIASIAMLVFGFIGE---M------G--T-----------M----------------------PM------PMG--ILGMLAWIYILYEI-----F--A-GEASKVNAA--S-GNAAS-Q-R-A-Y-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ929584 [unk-Proteo2-Glaciecola] PRGD_OTU160_9a3eb1bf876c9c22be21ceaf5880c3fe gb|KJ929584| PRGD_OTU160_9a3eb1bf876c9c22be21ceaf5880c3fe, putative proteorhodopsin gene, partial cds. PRGD_OTU160_9a3eb1bf876c9c22be21ceaf5880c3fe, putative proteorhodopsin gene, partial cds. KJ929584 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTTTGACGGTACCACTGCAGATTATAGAATTTTACCTCATCCTCGCAGCAATCGCTGTTGTCAGAGCCGCACTATTTTGGAAGTTAATGGTCGCATCTGTGGCAATGCTCGTCTTTGGATTTTTTGGCGAACTAGGCGTCTATCCTCTGCTCTTAGGTCTTCTTGGCGTAGCAGCGTGGGGCTACATCATCTACGAAATTTTCCTGGGTGAGGCCAGCAAAATCAGTGCAGAAAGTGGAACAGCTGCGAGCCAGATGGCTTTCAATGCTCTTCGACTAATTGTCACCATT LLTVPLQIIEFYLILAAIAVVRAALFWKLMVASVAMLVFGFFGELGVYPLLLGLLGVAAWGYIIYEIFLGEASKISAESGTAASQMAFNALRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTGACGGTACCACTGCAGATTATAGAATTTTACCTCATCCTCGCAGCA---------ATC---GCTGTTGTCAGAGCC---GCACTA------------------------------------TTTTGGAAG---TTAATGGTCGCATCTGTGGCAATGCTCGTCTTTGGATTTTTTGGCGAA---------CTA------------------GGC------GTC---------------------------------TAT------------------------------------------------------------------CCTCTG------------------CTCTTAGGT------CTTCTTGGCGTAGCAGCGTGGGGCTACATCATCTACGAAATT---------------TTC------CTG---GGTGAGGCCAGCAAAATCAGTGCAGAA------AGT---GGAACAGCTGCGAGC---CAG---ATG---GCT---TTC---AAT---GCTCTT---CGACTAATTGTCACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMVASVAMLVFGFFGE---L------G--V-----------Y----------------------PL------LLG--LLGVAAWGYIIYEI-----F--L-GEASKISAE--S-GTAAS-Q-M-A-F-N-AL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ929585 [unk-Proteo2-Glaciecola] PRGD_OTU160_a56ca44d5d8e98991d634ce40a61894f gb|KJ929585| PRGD_OTU160_a56ca44d5d8e98991d634ce40a61894f, putative proteorhodopsin gene, partial cds. PRGD_OTU160_a56ca44d5d8e98991d634ce40a61894f, putative proteorhodopsin gene, partial cds. KJ929585 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTTTGACGGTACCACTGCAGATTATAGAATTTTACCTAATCCTCGCAGCAATCGCTGTTGTCAGAGCGGCTCTATTTTGGAAGTTAATGGTCGCGTCTGTGGCAATGCTCGTTTTTGGATTTTTTGGCGAACTAGGCGTCTATCCTCTGCTCTTAGGCCTTCTTGGCGTAGCAGCGTGGGGCTACATCATCTACGAAATTTTCCTGGGTGAGGCCAGCAAAATCAGTGCAGAAAGCGGAACAGCTGCGAGCCAGATGGCTTTCAATGCTCTTCGACTAATTGTCACGATT LLTVPLQIIEFYLILAAIAVVRAALFWKLMVASVAMLVFGFFGELGVYPLLLGLLGVAAWGYIIYEIFLGEASKISAESGTAASQMAFNALRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTGACGGTACCACTGCAGATTATAGAATTTTACCTAATCCTCGCAGCA---------ATC---GCTGTTGTCAGAGCG---GCTCTA------------------------------------TTTTGGAAG---TTAATGGTCGCGTCTGTGGCAATGCTCGTTTTTGGATTTTTTGGCGAA---------CTA------------------GGC------GTC---------------------------------TAT------------------------------------------------------------------CCTCTG------------------CTCTTAGGC------CTTCTTGGCGTAGCAGCGTGGGGCTACATCATCTACGAAATT---------------TTC------CTG---GGTGAGGCCAGCAAAATCAGTGCAGAA------AGC---GGAACAGCTGCGAGC---CAG---ATG---GCT---TTC---AAT---GCTCTT---CGACTAATTGTCACGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMVASVAMLVFGFFGE---L------G--V-----------Y----------------------PL------LLG--LLGVAAWGYIIYEI-----F--L-GEASKISAE--S-GTAAS-Q-M-A-F-N-AL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ929586 [unk-Proteo2-Glaciecola] PRGD_OTU160_d13cc7b394e2c43ecc83de8236138828 gb|KJ929586| PRGD_OTU160_d13cc7b394e2c43ecc83de8236138828, putative proteorhodopsin gene, partial cds. PRGD_OTU160_d13cc7b394e2c43ecc83de8236138828, putative proteorhodopsin gene, partial cds. KJ929586 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTTTTGACGGTACCACTGCAGATTATCGAATTTTACCTAATCCTGGCAGCAATCGCTGTTGTCAGAGCCGCGCTATTTTGGAAGTTAATGGTCGCGTCTGTGGCAATGCTAGTTTTTGGATTTTTTGGCGAACTAGGCGTCTATCCTCTGATCTTAGGCCTTCTTGGCGTAGCAGCGTGGGGCTACATCATCTACGAAATTTTCCTGGGTGAGGCCAGCAAAATCAGTGCAGAAAGTGGAACGGCTGCGAGCCAGATGGCTTTCAATGCTCTTCGGCTAATTGTCACGATT LLTVPLQIIEFYLILAAIAVVRAALFWKLMVASVAMLVFGFFGELGVYPLILGLLGVAAWGYIIYEIFLGEASKISAESGTAASQMAFNALRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTGACGGTACCACTGCAGATTATCGAATTTTACCTAATCCTGGCAGCA---------ATC---GCTGTTGTCAGAGCC---GCGCTA------------------------------------TTTTGGAAG---TTAATGGTCGCGTCTGTGGCAATGCTAGTTTTTGGATTTTTTGGCGAA---------CTA------------------GGC------GTC---------------------------------TAT------------------------------------------------------------------CCTCTG------------------ATCTTAGGC------CTTCTTGGCGTAGCAGCGTGGGGCTACATCATCTACGAAATT---------------TTC------CTG---GGTGAGGCCAGCAAAATCAGTGCAGAA------AGT---GGAACGGCTGCGAGC---CAG---ATG---GCT---TTC---AAT---GCTCTT---CGGCTAATTGTCACGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMVASVAMLVFGFFGE---L------G--V-----------Y----------------------PL------ILG--LLGVAAWGYIIYEI-----F--L-GEASKISAE--S-GTAAS-Q-M-A-F-N-AL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ929583 [unk-Proteo2-Glaciecola] PRGD_OTU160_otuREP_df1092024f3357b3d1b44c91bbf13fd7 gb|KJ929583| PRGD_OTU160_otuREP_df1092024f3357b3d1b44c91bbf13fd7, putative proteorhodopsin gene, partial cds. PRGD_OTU160_otuREP_df1092024f3357b3d1b44c91bbf13fd7, putative proteorhodopsin gene, partial cds. KJ929583 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTTTTGACGGTACCACTGCAGATTATCGAATTTTACCTAATCCTCGCAGCAATCGCTGTTGTCAGAGCGGCGCTATTTTGGAAGTTAATGGTCGCGTCTGTGGCAATGCTCGTTTTTGGATTTTTTGGCGAACTAGGCGTCTATCCTCTGGTCTTAGGCCTTCTTGGCGTAGCAGCGTGGGGCTACATCATCTACGAAATTTTCCTGGGTGAGGCCAGTAAAATCAGTGCAGAAAGTGGAACAGCTGCGAGCCAGATGGCTTTCAATGCTCTTCGACTAATTGTCACGATT LLTVPLQIIEFYLILAAIAVVRAALFWKLMVASVAMLVFGFFGELGVYPLVLGLLGVAAWGYIIYEIFLGEASKISAESGTAASQMAFNALRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTGACGGTACCACTGCAGATTATCGAATTTTACCTAATCCTCGCAGCA---------ATC---GCTGTTGTCAGAGCG---GCGCTA------------------------------------TTTTGGAAG---TTAATGGTCGCGTCTGTGGCAATGCTCGTTTTTGGATTTTTTGGCGAA---------CTA------------------GGC------GTC---------------------------------TAT------------------------------------------------------------------CCTCTG------------------GTCTTAGGC------CTTCTTGGCGTAGCAGCGTGGGGCTACATCATCTACGAAATT---------------TTC------CTG---GGTGAGGCCAGTAAAATCAGTGCAGAA------AGT---GGAACAGCTGCGAGC---CAG---ATG---GCT---TTC---AAT---GCTCTT---CGACTAATTGTCACGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMVASVAMLVFGFFGE---L------G--V-----------Y----------------------PL------VLG--LLGVAAWGYIIYEI-----F--L-GEASKISAE--S-GTAAS-Q-M-A-F-N-AL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ929686 [unk-Proteo2-Glaciecola] PRGD_OTU195_otuREP_0a4baf8de5b190dd5034d6c9c9d067fd gb|KJ929686| PRGD_OTU195_otuREP_0a4baf8de5b190dd5034d6c9c9d067fd, putative proteorhodopsin gene, partial cds. PRGD_OTU195_otuREP_0a4baf8de5b190dd5034d6c9c9d067fd, putative proteorhodopsin gene, partial cds. KJ929686 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCTTGACGGTCCCTCTACAGATTGTGGAGTTCTACTTGATTTTAGCGGCGATTACTGTCGTTAAGACTGCATTGTTCTGGCGCCTCCTTGGAGCATCTCTGGTCATGCTGATCTTTGGTTTTTTAGGCGAGCAAGGATCGATGGAATACTGGACCGGATTTGCTATCGGGATGGCCGGATGGATTTACATTTTGTTTGAAATCTTCTTTGGAGAGGCGAGCAAAGTTAGTGCAGCTAGCGGATCGGCCGCCGGACAAAAAGCCTTTAATTCGCTGAAATGGATCGTATCGGTT LLTVPLQIVEFYLILAAITVVKTALFWRLLGASLVMLIFGFLGEQGSMEYWTGFAIGMAGWIYILFEIFFGEASKVSAASGSAAGQKAFNSLKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTGACGGTCCCTCTACAGATTGTGGAGTTCTACTTGATTTTAGCGGCG---------ATT---ACTGTCGTTAAGACT---GCATTG------------------------------------TTCTGGCGC---CTCCTTGGAGCATCTCTGGTCATGCTGATCTTTGGTTTTTTAGGCGAG---------CAA------------------GGA------TCG---------------------------------ATG------------------------------------------------------------------GAATAC------------------TGGACCGGA---TTTGCTATCGGGATGGCCGGATGGATTTACATTTTGTTTGAAATC---------------TTC------TTT---GGAGAGGCGAGCAAAGTTAGTGCAGCT------AGC---GGATCGGCCGCCGGA---CAA---AAA---GCC---TTT---AAT---TCGCTG---AAATGGATCGTATCGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-TVVKT-AL------------FWR-LLGASLVMLIFGFLGE---Q------G--S-----------M----------------------EY------WTG-FAIGMAGWIYILFEI-----F--F-GEASKVSAA--S-GSAAG-Q-K-A-F-N-SL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ929687 [unk-Proteo2-Glaciecola] PRGD_OTU195_f85dfb5aa8d89e8d644e2e1dc2c2cb04 gb|KJ929687| PRGD_OTU195_f85dfb5aa8d89e8d644e2e1dc2c2cb04, putative proteorhodopsin gene, partial cds. PRGD_OTU195_f85dfb5aa8d89e8d644e2e1dc2c2cb04, putative proteorhodopsin gene, partial cds. KJ929687 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTCTTACAGTCCCACTCCAGATTGTGGAGTTCTACTTGATCTTAGCAGCGATCACTGTGGTCAGAACTGCCTTGTTCTGGCGACTCCTGGGAGCGTCCTTAGTGATGCTAGTCTTCGGCTTTTTAGGGGAGCAAGGGTCCATGGAATACTGGACAGGTTTCGCCATCGGAATGGTCGGATGGATTTACATCTTGTTTGAAATATTTTTCGGTGAGGCAAGCAAAGTAAGTGCAGCAAGCGGTTCGGCCGCCGGGCAAAAGGCTTTCAATTCCCTAAAATGGATCGTGTCCGTC LLTVPLQIVEFYLILAAITVVRTALFWRLLGASLVMLVFGFLGEQGSMEYWTGFAIGMVGWIYILFEIFFGEASKVSAASGSAAGQKAFNSLKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTTACAGTCCCACTCCAGATTGTGGAGTTCTACTTGATCTTAGCAGCG---------ATC---ACTGTGGTCAGAACT---GCCTTG------------------------------------TTCTGGCGA---CTCCTGGGAGCGTCCTTAGTGATGCTAGTCTTCGGCTTTTTAGGGGAG---------CAA------------------GGG------TCC---------------------------------ATG------------------------------------------------------------------GAATAC------------------TGGACAGGT---TTCGCCATCGGAATGGTCGGATGGATTTACATCTTGTTTGAAATA---------------TTT------TTC---GGTGAGGCAAGCAAAGTAAGTGCAGCA------AGC---GGTTCGGCCGCCGGG---CAA---AAG---GCT---TTC---AAT---TCCCTA---AAATGGATCGTGTCCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-TVVRT-AL------------FWR-LLGASLVMLVFGFLGE---Q------G--S-----------M----------------------EY------WTG-FAIGMVGWIYILFEI-----F--F-GEASKVSAA--S-GSAAG-Q-K-A-F-N-SL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ929504 [unk-Proteo2-Glaciecola] PRGD_OTU139_762bcecc30f74445df47dcc0fc21fec5 gb|KJ929504| PRGD_OTU139_762bcecc30f74445df47dcc0fc21fec5, putative proteorhodopsin gene, partial cds. PRGD_OTU139_762bcecc30f74445df47dcc0fc21fec5, putative proteorhodopsin gene, partial cds. KJ929504 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCCTAACGGTTCCGCTGCAAATTGTTGAGTTCTACCTCATCCTAGCGGCCATCACGCAAGTGCGCTCAGCGCTGTTTTGGAAGCTCCTCATCGCATCTGTTGTGATGCTCGTATTCGGGTTCGTGGGCGAGCTCGGCGTGATGCAGTATTGGGTCGCTTTTGCCATTGGCATGGCGGGCTGGCTTTACATTCTCTATGAAATCTTTGTGGGCGAGGCGAGTCAGATCAGCGCCTCAAGTGGCAACGCGGCAGGCCAGCAGGCCTTCAACGCGCTCAAGTGGATCGTGTCGGTT LLTVPLQIVEFYLILAAITQVRSALFWKLLIASVVMLVFGFVGELGVMQYWVAFAIGMAGWLYILYEIFVGEASQISASSGNAAGQQAFNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTAACGGTTCCGCTGCAAATTGTTGAGTTCTACCTCATCCTAGCGGCC---------ATC---ACGCAAGTGCGCTCA---GCGCTG------------------------------------TTTTGGAAG---CTCCTCATCGCATCTGTTGTGATGCTCGTATTCGGGTTCGTGGGCGAG---------CTC------------------GGC------GTG---------------------------------ATG------------------------------------------------------------------CAGTAT------------------TGGGTCGCT---TTTGCCATTGGCATGGCGGGCTGGCTTTACATTCTCTATGAAATC---------------TTT------GTG---GGCGAGGCGAGTCAGATCAGCGCCTCA------AGT---GGCAACGCGGCAGGC---CAG---CAG---GCC---TTC---AAC---GCGCTC---AAGTGGATCGTGTCGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-TQVRS-AL------------FWK-LLIASVVMLVFGFVGE---L------G--V-----------M----------------------QY------WVA-FAIGMAGWLYILYEI-----F--V-GEASQISAS--S-GNAAG-Q-Q-A-F-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ929502 [unk-Proteo2-Glaciecola] PRGD_OTU139_otuREP_da9c509e965840e4a2f2c7da27521ec7 gb|KJ929502| PRGD_OTU139_otuREP_da9c509e965840e4a2f2c7da27521ec7, putative proteorhodopsin gene, partial cds. PRGD_OTU139_otuREP_da9c509e965840e4a2f2c7da27521ec7, putative proteorhodopsin gene, partial cds. KJ929502 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTCTAACGGTTCCGCTGCAAATTGTTGAGTTCTACCTCATCCTAGCGGCCATCACGCAAGTGCGCTCAGCGCTGTTTTGGAAGCTCCTCATCGCATCTGTTGTGATGCTCGTATTCGGGTTCGTGGGCGAGCTCGGCGTGATGCAGTATTGGGTCGCTTTTGCCATTGGTATGGCGGGCTGGCTCTACATTCTCTATGAAATCTTTGTGGGCGAGGCGAGTCAGATCAGCGCCTCAAGTGGCAACGCGGCAGGCCAGCAGGCCTTCAACGCGCTCAAGTGGATCGTGTCGGTT LLTVPLQIVEFYLILAAITQVRSALFWKLLIASVVMLVFGFVGELGVMQYWVAFAIGMAGWLYILYEIFVGEASQISASSGNAAGQQAFNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTAACGGTTCCGCTGCAAATTGTTGAGTTCTACCTCATCCTAGCGGCC---------ATC---ACGCAAGTGCGCTCA---GCGCTG------------------------------------TTTTGGAAG---CTCCTCATCGCATCTGTTGTGATGCTCGTATTCGGGTTCGTGGGCGAG---------CTC------------------GGC------GTG---------------------------------ATG------------------------------------------------------------------CAGTAT------------------TGGGTCGCT---TTTGCCATTGGTATGGCGGGCTGGCTCTACATTCTCTATGAAATC---------------TTT------GTG---GGCGAGGCGAGTCAGATCAGCGCCTCA------AGT---GGCAACGCGGCAGGC---CAG---CAG---GCC---TTC---AAC---GCGCTC---AAGTGGATCGTGTCGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-TQVRS-AL------------FWK-LLIASVVMLVFGFVGE---L------G--V-----------M----------------------QY------WVA-FAIGMAGWLYILYEI-----F--V-GEASQISAS--S-GNAAG-Q-Q-A-F-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ929503 [unk-Proteo2-Glaciecola] PRGD_OTU139_2c6d6eb7ee6837d4b0623bc51fc88f30 gb|KJ929503| PRGD_OTU139_2c6d6eb7ee6837d4b0623bc51fc88f30, putative proteorhodopsin gene, partial cds. PRGD_OTU139_2c6d6eb7ee6837d4b0623bc51fc88f30, putative proteorhodopsin gene, partial cds. KJ929503 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTCCTAACGGTTCCGCTGCAAATTGTTGAGTTCTACCTCATCCTAGCTGCCATCACGCAAGTGCGCTCCGCGCTGTTCTGGAAGCTCCTCATCGCATCTGTTGTGATGCTCGTATTCGGGTTCGTGGGCGAGCTCGGCGTGATGCAGTATTGGGTCGCTTTTGCCATTGGTATGGCGGGCTGGCTCTACATTCTCTATGAAATCTTTGTGGGCGAGGCGAGTCAGATCAGCGCCTCAAGTGGCAACGCGGCAGGCCAGCAGGCCTTCAACGCGCTCAAGTGGATCGTGTCGGTT LLTVPLQIVEFYLILAAITQVRSALFWKLLIASVVMLVFGFVGELGVMQYWVAFAIGMAGWLYILYEIFVGEASQISASSGNAAGQQAFNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTAACGGTTCCGCTGCAAATTGTTGAGTTCTACCTCATCCTAGCTGCC---------ATC---ACGCAAGTGCGCTCC---GCGCTG------------------------------------TTCTGGAAG---CTCCTCATCGCATCTGTTGTGATGCTCGTATTCGGGTTCGTGGGCGAG---------CTC------------------GGC------GTG---------------------------------ATG------------------------------------------------------------------CAGTAT------------------TGGGTCGCT---TTTGCCATTGGTATGGCGGGCTGGCTCTACATTCTCTATGAAATC---------------TTT------GTG---GGCGAGGCGAGTCAGATCAGCGCCTCA------AGT---GGCAACGCGGCAGGC---CAG---CAG---GCC---TTC---AAC---GCGCTC---AAGTGGATCGTGTCGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-TQVRS-AL------------FWK-LLIASVVMLVFGFVGE---L------G--V-----------M----------------------QY------WVA-FAIGMAGWLYILYEI-----F--V-GEASQISAS--S-GNAAG-Q-Q-A-F-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ929505 [unk-Proteo2-Glaciecola] PRGD_OTU139_c58dc5cd25c0a78318b1d57192927025 gb|KJ929505| PRGD_OTU139_c58dc5cd25c0a78318b1d57192927025, putative proteorhodopsin gene, partial cds. PRGD_OTU139_c58dc5cd25c0a78318b1d57192927025, putative proteorhodopsin gene, partial cds. KJ929505 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCCTAACGGTTCCGCTGCAAATTGTTGAGTTCTACCTCATTCTAGCGGCCATCACGCAAGTGCGTTCAGCGCTGTTTTGGAAGCTCCTCATCGCCTCTGTCGTGATGCTCGTATTCGGGTTCGTGGGCGAGCTCGGCGTCATGCAGTATTGGGTCGCCTTTGCCATTGGTATGGCGGGCTGGCTCTACATTCTCTACGAAATCTTTGTGGGCGAGGCGAGTCAGATCAGCGCCTCAAGTGGCAACGCGGCAGGCCAGCAGGCCTTCAACGCGCTCAAGTGGATCGTGTCGGTT LLTVPLQIVEFYLILAAITQVRSALFWKLLIASVVMLVFGFVGELGVMQYWVAFAIGMAGWLYILYEIFVGEASQISASSGNAAGQQAFNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTAACGGTTCCGCTGCAAATTGTTGAGTTCTACCTCATTCTAGCGGCC---------ATC---ACGCAAGTGCGTTCA---GCGCTG------------------------------------TTTTGGAAG---CTCCTCATCGCCTCTGTCGTGATGCTCGTATTCGGGTTCGTGGGCGAG---------CTC------------------GGC------GTC---------------------------------ATG------------------------------------------------------------------CAGTAT------------------TGGGTCGCC---TTTGCCATTGGTATGGCGGGCTGGCTCTACATTCTCTACGAAATC---------------TTT------GTG---GGCGAGGCGAGTCAGATCAGCGCCTCA------AGT---GGCAACGCGGCAGGC---CAG---CAG---GCC---TTC---AAC---GCGCTC---AAGTGGATCGTGTCGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-TQVRS-AL------------FWK-LLIASVVMLVFGFVGE---L------G--V-----------M----------------------QY------WVA-FAIGMAGWLYILYEI-----F--V-GEASQISAS--S-GNAAG-Q-Q-A-F-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ929792 [unk-Proteo2-Glaciecola] PRGD_OTU248_otuREP_603b492f1f9bf979cfa4535d70b0ab83 gb|KJ929792| PRGD_OTU248_otuREP_603b492f1f9bf979cfa4535d70b0ab83, putative proteorhodopsin gene, partial cds. PRGD_OTU248_otuREP_603b492f1f9bf979cfa4535d70b0ab83, putative proteorhodopsin gene, partial cds. KJ929792 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATAACGGTACCGCTTCAGATAGTCGAGTTTTACCTGATTCTTGCGGCGATCACCGCAGTCAGCGCAGCCCTGTTTTGGCGCCTCATGATTGCCTCGGTGCTGATGCTGGTTTTTGGATTTTTGGGTGAAGTCGGCGCAATGGCCGGAACCATCGCTGGGGTGATTGGGGTTGTGGCGTGGCTTTACATTATTTACGAAGTGTTCGCGGGTGAAGCGAGCAAGATCAACGCTGAGAGTGGAAGTCCGGCCAGCCAAACCGCGTTTGTGGCGCTACGGTGGATTGTATCCGTG LITVPLQIVEFYLILAAITAVSAALFWRLMIASVLMLVFGFLGEVGAMAGTIAGVIGVVAWLYIIYEVFAGEASKINAESGSPASQTAFVALRWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACGGTACCGCTTCAGATAGTCGAGTTTTACCTGATTCTTGCGGCG---------ATC---ACCGCAGTCAGCGCA---GCCCTG------------------------------------TTTTGGCGC---CTCATGATTGCCTCGGTGCTGATGCTGGTTTTTGGATTTTTGGGTGAA---------GTC------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------GCCGGA------------------ACCATCGCT---GGGGTGATTGGGGTTGTGGCGTGGCTTTACATTATTTACGAAGTG---------------TTC------GCG---GGTGAAGCGAGCAAGATCAACGCTGAG------AGT---GGAAGTCCGGCCAGC---CAA---ACC---GCG---TTT---GTG---GCGCTA---CGGTGGATTGTATCCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---I-TAVSA-AL------------FWR-LMIASVLMLVFGFLGE---V------G--A-----------M----------------------AG------TIA-GVIGVVAWLYIIYEV-----F--A-GEASKINAE--S-GSPAS-Q-T-A-F-V-AL-RWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ929793 [unk-Proteo2-Glaciecola] PRGD_OTU248_ad221eee4c93b8b632a08c15a1b453a9 gb|KJ929793| PRGD_OTU248_ad221eee4c93b8b632a08c15a1b453a9, putative proteorhodopsin gene, partial cds. PRGD_OTU248_ad221eee4c93b8b632a08c15a1b453a9, putative proteorhodopsin gene, partial cds. KJ929793 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) CTAATCACCGTGCCGTTGCAGATTGTCGAGTTTTACCTCATCCTAGCAGCCATCACAGCTGTTAGCGCCGCTCTCTTTTGGCGACTTCTCATCGCTTCAGTCCTGATGCTCGTTTTCGGTTTCCTTGGCGAAGTAGGTGCAATGGCCGGTGTCATCGCCGGTGTGATTGGCGTCGTTGCATGGCTTTACATCATCTACGAAGTCTTTGCGGGCGAGGCCAGCAAGATTAACGCAGCCAGCGGTAGCCCCGCCAGCCAGACAGCTTTCAGTGCCTTGAGGTGGATCGTATCCGTG LITVPLQIVEFYLILAAITAVSAALFWRLLIASVLMLVFGFLGEVGAMAGVIAGVIGVVAWLYIIYEVFAGEASKINAASGSPASQTAFSALRWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACCGTGCCGTTGCAGATTGTCGAGTTTTACCTCATCCTAGCAGCC---------ATC---ACAGCTGTTAGCGCC---GCTCTC------------------------------------TTTTGGCGA---CTTCTCATCGCTTCAGTCCTGATGCTCGTTTTCGGTTTCCTTGGCGAA---------GTA------------------GGT------GCA---------------------------------ATG------------------------------------------------------------------GCCGGT------------------GTCATCGCC---GGTGTGATTGGCGTCGTTGCATGGCTTTACATCATCTACGAAGTC---------------TTT------GCG---GGCGAGGCCAGCAAGATTAACGCAGCC------AGC---GGTAGCCCCGCCAGC---CAG---ACA---GCT---TTC---AGT---GCCTTG---AGGTGGATCGTATCCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---I-TAVSA-AL------------FWR-LLIASVLMLVFGFLGE---V------G--A-----------M----------------------AG------VIA-GVIGVVAWLYIIYEV-----F--A-GEASKINAA--S-GSPAS-Q-T-A-F-S-AL-RWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ929812 [unk-Proteo2-Glaciecola] PRGD_OTU263_otuREP_14222bd27a68af28d7a26c924382d6d5 gb|KJ929812| PRGD_OTU263_otuREP_14222bd27a68af28d7a26c924382d6d5, putative proteorhodopsin gene, partial cds. PRGD_OTU263_otuREP_14222bd27a68af28d7a26c924382d6d5, putative proteorhodopsin gene, partial cds. KJ929812 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGCTGACCGTCCCCCTCCAGATTGTTGAGTTTTTCCTCATTCTGGCGGCCATCACAGTTGTCCCAGCCGCTTTGTTCTGGCGCCTGCTCATTGCTTCCATCGTGATGCTCGTTGGCGGCTACCTGGGTGAAGCGGGCTTCATGAACGTCACCCTCGCCTTCGCGATTGGCATGGCGGGCTGGCTGTGGATTCTGTACGAGATCTTCATCGGCGAGGCCAGCAAGATTAACGCTGCCAGTTCGAATGAAGCCTGCCAGACAGCGTTCAAAACCCTGAGACTGATCGTCTCGGTG LLTVPLQIVEFFLILAAITVVPAALFWRLLIASIVMLVGGYLGEAGFMNVTLAFAIGMAGWLWILYEIFIGEASKINAASSNEACQTAFKTLRLIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTGACCGTCCCCCTCCAGATTGTTGAGTTTTTCCTCATTCTGGCGGCC---------ATC---ACAGTTGTCCCAGCC---GCTTTG------------------------------------TTCTGGCGC---CTGCTCATTGCTTCCATCGTGATGCTCGTTGGCGGCTACCTGGGTGAA---------GCG------------------GGC------TTC---------------------------------ATG------------------------------------------------------------------AACGTC------------------ACCCTCGCC---TTCGCGATTGGCATGGCGGGCTGGCTGTGGATTCTGTACGAGATC---------------TTC------ATC---GGCGAGGCCAGCAAGATTAACGCTGCC------AGT---TCGAATGAAGCCTGC---CAG---ACA---GCG---TTC---AAA---ACCCTG---AGACTGATCGTCTCGGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFFLILAA---I-TVVPA-AL------------FWR-LLIASIVMLVGGYLGE---A------G--F-----------M----------------------NV------TLA-FAIGMAGWLWILYEI-----F--I-GEASKINAA--S-SNEAC-Q-T-A-F-K-TL-RLIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ929831 [unk-Proteo2-Glaciecola] PRGD_OTU282_otuREP_a3e1625da1d312ad19e71d8a7b205491 gb|KJ929831| PRGD_OTU282_otuREP_a3e1625da1d312ad19e71d8a7b205491, putative proteorhodopsin gene, partial cds. PRGD_OTU282_otuREP_a3e1625da1d312ad19e71d8a7b205491, putative proteorhodopsin gene, partial cds. KJ929831 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGCTCACCGTACCTCTACAAATCGTGGAGTTCTATCTCATATTGGCCGCGATCACAGCCGTCGGGGTCGGATTATTTTGGCGGTTACTCGTGGCCTCTGTGGTGATGTTGGTGTTTGGCTTCTTGGGGGAAGTGGGTACCATGCAATATTGGATCGCGTTCGCCATCGGTATGGGGGGATGGCTCTACATACTCTTCGAGATATTTGCCGGCGAAGCGAGCAAGATTAACGCGGCCAATGGTACGCCGGCCAGTCAGTCCGCCTTCAACGCGCTCAAGTGGATCGTATCGGTA LLTVPLQIVEFYLILAAITAVGVGLFWRLLVASVVMLVFGFLGEVGTMQYWIAFAIGMGGWLYILFEIFAGEASKINAANGTPASQSAFNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTCACCGTACCTCTACAAATCGTGGAGTTCTATCTCATATTGGCCGCG---------ATC---ACAGCCGTCGGGGTC---GGATTA------------------------------------TTTTGGCGG---TTACTCGTGGCCTCTGTGGTGATGTTGGTGTTTGGCTTCTTGGGGGAA---------GTG------------------GGT------ACC---------------------------------ATG------------------------------------------------------------------CAATAT------------------TGGATCGCG---TTCGCCATCGGTATGGGGGGATGGCTCTACATACTCTTCGAGATA---------------TTT------GCC---GGCGAAGCGAGCAAGATTAACGCGGCC------AAT---GGTACGCCGGCCAGT---CAG---TCC---GCC---TTC---AAC---GCGCTC---AAGTGGATCGTATCGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-TAVGV-GL------------FWR-LLVASVVMLVFGFLGE---V------G--T-----------M----------------------QY------WIA-FAIGMGGWLYILFEI-----F--A-GEASKINAA--N-GTPAS-Q-S-A-F-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ929816 [unk-Proteo2-Glaciecola] PRGD_OTU267_otuREP_11d1183439d5a9dbbed469e5d97dc342 gb|KJ929816| PRGD_OTU267_otuREP_11d1183439d5a9dbbed469e5d97dc342, putative proteorhodopsin gene, partial cds. PRGD_OTU267_otuREP_11d1183439d5a9dbbed469e5d97dc342, putative proteorhodopsin gene, partial cds. KJ929816 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCCTCACGGTGCCCCTTCAGATCGTAGAGTTCTATCTTATCCTGGCCGCGATTACAGTGGTAAGCGCGTCTCTCTTTTGGCGTCTATTCGTCGCTTCGATCGTCATGTTGGTCTTCGGCTTCTTAGGTGAGGTCGGCACGATGGACTACTGGGTTGGCTTCGGTATCGGCATGGCCGGTTGGTTGTACATCCTCTATGAGATCTTCGCAGGCGAGGCCAGCAAGATTAACGCGGAGAGCGGCTCCGCTGCGAGCCAGCGAGCGTTCAACGCGCTTCGCATCATCGTGAGTGTT LLTVPLQIVEFYLILAAITVVSASLFWRLFVASIVMLVFGFLGEVGTMDYWVGFGIGMAGWLYILYEIFAGEASKINAESGSAASQRAFNALRIIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTCACGGTGCCCCTTCAGATCGTAGAGTTCTATCTTATCCTGGCCGCG---------ATT---ACAGTGGTAAGCGCG---TCTCTC------------------------------------TTTTGGCGT---CTATTCGTCGCTTCGATCGTCATGTTGGTCTTCGGCTTCTTAGGTGAG---------GTC------------------GGC------ACG---------------------------------ATG------------------------------------------------------------------GACTAC------------------TGGGTTGGC---TTCGGTATCGGCATGGCCGGTTGGTTGTACATCCTCTATGAGATC---------------TTC------GCA---GGCGAGGCCAGCAAGATTAACGCGGAG------AGC---GGCTCCGCTGCGAGC---CAG---CGA---GCG---TTC---AAC---GCGCTT---CGCATCATCGTGAGTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-TVVSA-SL------------FWR-LFVASIVMLVFGFLGE---V------G--T-----------M----------------------DY------WVG-FGIGMAGWLYILYEI-----F--A-GEASKINAE--S-GSAAS-Q-R-A-F-N-AL-RIIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928827 [unk-Proteo2-Glaciecola] PRGD_OTU055_6c9627bbabfa1d5aacbd223cfe3cbd7f gb|KJ928827| PRGD_OTU055_6c9627bbabfa1d5aacbd223cfe3cbd7f, putative proteorhodopsin gene, partial cds. PRGD_OTU055_6c9627bbabfa1d5aacbd223cfe3cbd7f, putative proteorhodopsin gene, partial cds. KJ928827 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTACTGACCGTACCGCTGCAGATCATTGAGTTTTATTTGATCCTCGCAGCGATCACGACGGTACGGGCAGCGTTGTTTTGGAAGCTTCTCATCGCCTCGCTGGTGATGCTCGTCTTCGGCTACGTCGGAGAGGTTGGCACCATGGCGTACTGGCCGGCATTCATTATCGGCATGGCTGGATGGCTGTACATTCTCTATGAGATCTTTGCCGGTGAGGCGAGTCGGATCAATGCCGAGAGCGGAACGCCTGCAAGTCAACGAGCCTTCAATGCGCTAAGGTGGATCGTTTCTGTT LLTVPLQIIEFYLILAAITTVRAALFWKLLIASLVMLVFGYVGEVGTMAYWPAFIIGMAGWLYILYEIFAGEASRINAESGTPASQRAFNALRWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTGACCGTACCGCTGCAGATCATTGAGTTTTATTTGATCCTCGCAGCG---------ATC---ACGACGGTACGGGCA---GCGTTG------------------------------------TTTTGGAAG---CTTCTCATCGCCTCGCTGGTGATGCTCGTCTTCGGCTACGTCGGAGAG---------GTT------------------GGC------ACC---------------------------------ATG------------------------------------------------------------------GCGTAC------------------TGGCCGGCA---TTCATTATCGGCATGGCTGGATGGCTGTACATTCTCTATGAGATC---------------TTT------GCC---GGTGAGGCGAGTCGGATCAATGCCGAG------AGC---GGAACGCCTGCAAGT---CAA---CGA---GCC---TTC---AAT---GCGCTA---AGGTGGATCGTTTCTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-TTVRA-AL------------FWK-LLIASLVMLVFGYVGE---V------G--T-----------M----------------------AY------WPA-FIIGMAGWLYILYEI-----F--A-GEASRINAE--S-GTPAS-Q-R-A-F-N-AL-RWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928837 [unk-Proteo2-Glaciecola] PRGD_OTU055_e6e5b59cabae50f90b8f9196e552ff65 gb|KJ928837| PRGD_OTU055_e6e5b59cabae50f90b8f9196e552ff65, putative proteorhodopsin gene, partial cds. PRGD_OTU055_e6e5b59cabae50f90b8f9196e552ff65, putative proteorhodopsin gene, partial cds. KJ928837 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-33.28, 45.35) CTGCTTACGGTTCCGCTGCAAATTGTAGAGTTCTACCTTATCCTCGCCGCCATCACAGCAGTTCGGGCGGCGTTGTTTTGGAAGCTTCTCATCGCCTCGCTCGTGATGCTCATCTTCGGCTTTGTCGGAGAAGTGGGAACGATGGCATACTGGCCGGCATTCGCCATCGGCATGGCAGGCTGGTTGTACATCCTGTACGAAATCTTCGTTGGAGAGGCGAGCCGGATCAATGCTGAGAGCGGCAGTGTAGCAAGCCAGCGAGCGTTTAACGCGTTGAAATGGATCGTTTCCGTC LLTVPLQIVEFYLILAAITAVRAALFWKLLIASLVMLIFGFVGEVGTMAYWPAFAIGMAGWLYILYEIFVGEASRINAESGSVASQRAFNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTTACGGTTCCGCTGCAAATTGTAGAGTTCTACCTTATCCTCGCCGCC---------ATC---ACAGCAGTTCGGGCG---GCGTTG------------------------------------TTTTGGAAG---CTTCTCATCGCCTCGCTCGTGATGCTCATCTTCGGCTTTGTCGGAGAA---------GTG------------------GGA------ACG---------------------------------ATG------------------------------------------------------------------GCATAC------------------TGGCCGGCA---TTCGCCATCGGCATGGCAGGCTGGTTGTACATCCTGTACGAAATC---------------TTC------GTT---GGAGAGGCGAGCCGGATCAATGCTGAG------AGC---GGCAGTGTAGCAAGC---CAG---CGA---GCG---TTT---AAC---GCGTTG---AAATGGATCGTTTCCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-TAVRA-AL------------FWK-LLIASLVMLIFGFVGE---V------G--T-----------M----------------------AY------WPA-FAIGMAGWLYILYEI-----F--V-GEASRINAE--S-GSVAS-Q-R-A-F-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928826 [unk-Proteo2-Glaciecola] PRGD_OTU055_4b8902caf5f465110f95679994c8de1a gb|KJ928826| PRGD_OTU055_4b8902caf5f465110f95679994c8de1a, putative proteorhodopsin gene, partial cds. PRGD_OTU055_4b8902caf5f465110f95679994c8de1a, putative proteorhodopsin gene, partial cds. KJ928826 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTACTGACGGTGCCTCTACAAATCGTCGAGTTCTACCTGATCTTGGCAGCGATCACCGCTGTTCGAGCCGCCTTGTTCTGGAAGCTTTTGGTCGCATCGCTTGTCATGCTCATCTTCGGATTTGTCGGCGAAGTCGGTACGATGGCTTACTGGCCTGCATTTGCTATCGGCATGGCTGGTTGGTTGTATATTCTGTATGAGATCTTCGCAGGTGAAGCGAGCAGGATTAATGCGGAGAACGGTACTGCAGCGAGTAAAAGCGCCTTCAACGCCTTGAAGTGGATTGTTTCCGTG LLTVPLQIVEFYLILAAITAVRAALFWKLLVASLVMLIFGFVGEVGTMAYWPAFAIGMAGWLYILYEIFAGEASRINAENGTAASKSAFNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTGACGGTGCCTCTACAAATCGTCGAGTTCTACCTGATCTTGGCAGCG---------ATC---ACCGCTGTTCGAGCC---GCCTTG------------------------------------TTCTGGAAG---CTTTTGGTCGCATCGCTTGTCATGCTCATCTTCGGATTTGTCGGCGAA---------GTC------------------GGT------ACG---------------------------------ATG------------------------------------------------------------------GCTTAC------------------TGGCCTGCA---TTTGCTATCGGCATGGCTGGTTGGTTGTATATTCTGTATGAGATC---------------TTC------GCA---GGTGAAGCGAGCAGGATTAATGCGGAG------AAC---GGTACTGCAGCGAGT---AAA---AGC---GCC---TTC---AAC---GCCTTG---AAGTGGATTGTTTCCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-TAVRA-AL------------FWK-LLVASLVMLIFGFVGE---V------G--T-----------M----------------------AY------WPA-FAIGMAGWLYILYEI-----F--A-GEASRINAE--N-GTAAS-K-S-A-F-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928833 [unk-Proteo2-Glaciecola] PRGD_OTU055_a53feda933cb70803220da8e4c4377c8 gb|KJ928833| PRGD_OTU055_a53feda933cb70803220da8e4c4377c8, putative proteorhodopsin gene, partial cds. PRGD_OTU055_a53feda933cb70803220da8e4c4377c8, putative proteorhodopsin gene, partial cds. KJ928833 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) CTACTGACGGTGCCTCTACAAATCGTCGAATTCTACCTGATCTTGGCAGCGATCACCGCTGTTCGAGCCGCCTTGTTCTGGAAGCTTTTGGTCGCATCGCTTGTCATGCTCATCTTCGGATTTGTCGGCGAAGTCGGTACGATGGCTTACTGGCCTGCATTCGCTATCGGCATGGCTGGTTGGTTGTATATTCTGTATGAGATCTTCGCAGGTGAAGCGAGCAGGATTAATGCGGAGAACGGTACTGCAGCGAGTAAAAGCGCCTTCAACGCCTTGAAGTGGATTGTTTCCGTG LLTVPLQIVEFYLILAAITAVRAALFWKLLVASLVMLIFGFVGEVGTMAYWPAFAIGMAGWLYILYEIFAGEASRINAENGTAASKSAFNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTGACGGTGCCTCTACAAATCGTCGAATTCTACCTGATCTTGGCAGCG---------ATC---ACCGCTGTTCGAGCC---GCCTTG------------------------------------TTCTGGAAG---CTTTTGGTCGCATCGCTTGTCATGCTCATCTTCGGATTTGTCGGCGAA---------GTC------------------GGT------ACG---------------------------------ATG------------------------------------------------------------------GCTTAC------------------TGGCCTGCA---TTCGCTATCGGCATGGCTGGTTGGTTGTATATTCTGTATGAGATC---------------TTC------GCA---GGTGAAGCGAGCAGGATTAATGCGGAG------AAC---GGTACTGCAGCGAGT---AAA---AGC---GCC---TTC---AAC---GCCTTG---AAGTGGATTGTTTCCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-TAVRA-AL------------FWK-LLVASLVMLIFGFVGE---V------G--T-----------M----------------------AY------WPA-FAIGMAGWLYILYEI-----F--A-GEASRINAE--N-GTAAS-K-S-A-F-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928824 [unk-Proteo2-Glaciecola] PRGD_OTU055_32a9ceba98c8250738f8904365b42ca0 gb|KJ928824| PRGD_OTU055_32a9ceba98c8250738f8904365b42ca0, putative proteorhodopsin gene, partial cds. PRGD_OTU055_32a9ceba98c8250738f8904365b42ca0, putative proteorhodopsin gene, partial cds. KJ928824 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-23.5956, 69.0419) CTACTGACGGTGCCTCTACAAATCGTCGAATTCTATCTGATCTTGGCAGCGATCACCGCTGTTCGAGCCGCCTTGTTCTGGAAGCTTTTGGTTGCATCGCTTGTCATGCTCATCTTCGGTTTTGTCGGCGAAGTCGGTACGATGGCTTACTGGCCGGCATTCGCTATCGGCATGGCTGGTTGGTTGTATATTCTGTATGAGATCTTCGCAGGTGAAGCGAGCAGGATTAATGCGGAGAACGGCACTGCGGCGAGTAAGAGCGCCTTCAATGCGTTGAAGTGGATTGTTTCCGTG LLTVPLQIVEFYLILAAITAVRAALFWKLLVASLVMLIFGFVGEVGTMAYWPAFAIGMAGWLYILYEIFAGEASRINAENGTAASKSAFNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTGACGGTGCCTCTACAAATCGTCGAATTCTATCTGATCTTGGCAGCG---------ATC---ACCGCTGTTCGAGCC---GCCTTG------------------------------------TTCTGGAAG---CTTTTGGTTGCATCGCTTGTCATGCTCATCTTCGGTTTTGTCGGCGAA---------GTC------------------GGT------ACG---------------------------------ATG------------------------------------------------------------------GCTTAC------------------TGGCCGGCA---TTCGCTATCGGCATGGCTGGTTGGTTGTATATTCTGTATGAGATC---------------TTC------GCA---GGTGAAGCGAGCAGGATTAATGCGGAG------AAC---GGCACTGCGGCGAGT---AAG---AGC---GCC---TTC---AAT---GCGTTG---AAGTGGATTGTTTCCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-TAVRA-AL------------FWK-LLVASLVMLIFGFVGE---V------G--T-----------M----------------------AY------WPA-FAIGMAGWLYILYEI-----F--A-GEASRINAE--N-GTAAS-K-S-A-F-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928829 [unk-Proteo2-Glaciecola] PRGD_OTU055_87828389bfa1c65be3ba9efbd8bfc745 gb|KJ928829| PRGD_OTU055_87828389bfa1c65be3ba9efbd8bfc745, putative proteorhodopsin gene, partial cds. PRGD_OTU055_87828389bfa1c65be3ba9efbd8bfc745, putative proteorhodopsin gene, partial cds. KJ928829 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTACTGACGGTGCCTCTGCAAATCGTCGAGTTCTACCTGATCTTGGCAGCGATCACCGCTGTTCGCGCCGCCTTGTTCTGGAAGCTTTTGGTCGCATCGCTTGTCATGCTCATCTTCGGATTTGTCGGCGAAGTCGGTACGATGGCTTACTGGCCTGCATTCGCTATCGGCATGGCTGGTTGGTTGTATATTCTGTATGAAATCTTCGCAGGTGAAGCGAGCAAGATCAATGCGGAGAATGGTACTGCGGCGAGTAAAAGCGCCTTCAACGCCTTGAAGTGGATTGTTTCTGTG LLTVPLQIVEFYLILAAITAVRAALFWKLLVASLVMLIFGFVGEVGTMAYWPAFAIGMAGWLYILYEIFAGEASKINAENGTAASKSAFNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTGACGGTGCCTCTGCAAATCGTCGAGTTCTACCTGATCTTGGCAGCG---------ATC---ACCGCTGTTCGCGCC---GCCTTG------------------------------------TTCTGGAAG---CTTTTGGTCGCATCGCTTGTCATGCTCATCTTCGGATTTGTCGGCGAA---------GTC------------------GGT------ACG---------------------------------ATG------------------------------------------------------------------GCTTAC------------------TGGCCTGCA---TTCGCTATCGGCATGGCTGGTTGGTTGTATATTCTGTATGAAATC---------------TTC------GCA---GGTGAAGCGAGCAAGATCAATGCGGAG------AAT---GGTACTGCGGCGAGT---AAA---AGC---GCC---TTC---AAC---GCCTTG---AAGTGGATTGTTTCTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-TAVRA-AL------------FWK-LLVASLVMLIFGFVGE---V------G--T-----------M----------------------AY------WPA-FAIGMAGWLYILYEI-----F--A-GEASKINAE--N-GTAAS-K-S-A-F-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928834 [unk-Proteo2-Glaciecola] PRGD_OTU055_a7cc9c0b05334f3435cf33243b751e16 gb|KJ928834| PRGD_OTU055_a7cc9c0b05334f3435cf33243b751e16, putative proteorhodopsin gene, partial cds. PRGD_OTU055_a7cc9c0b05334f3435cf33243b751e16, putative proteorhodopsin gene, partial cds. KJ928834 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTACTGACGGTGCCTCTACAAATCGTCGAATTCTATCTGATCTTGGCAGCGATCACCGCTGTTCGAGCCGCCTTGTTCTGGAAGCTTTTGGTTGCATCGCTTGTCATGCTCATCTTCGGTTTTGTCGGCGAAGTCGGTACGATGGCTTACTGGCCGGCATTCGCTATCGGCATGGCTGGTTGGTTGTATATTCTGTATGAAATCTTCGTGGGTGAAGCGAGCAAGATCAACGCGGAGAACGGTACTGCGGCAAGTAAAAGCGCCTTCAATGCCTTGAAGTGGATTGTTTCCGTG LLTVPLQIVEFYLILAAITAVRAALFWKLLVASLVMLIFGFVGEVGTMAYWPAFAIGMAGWLYILYEIFVGEASKINAENGTAASKSAFNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTGACGGTGCCTCTACAAATCGTCGAATTCTATCTGATCTTGGCAGCG---------ATC---ACCGCTGTTCGAGCC---GCCTTG------------------------------------TTCTGGAAG---CTTTTGGTTGCATCGCTTGTCATGCTCATCTTCGGTTTTGTCGGCGAA---------GTC------------------GGT------ACG---------------------------------ATG------------------------------------------------------------------GCTTAC------------------TGGCCGGCA---TTCGCTATCGGCATGGCTGGTTGGTTGTATATTCTGTATGAAATC---------------TTC------GTG---GGTGAAGCGAGCAAGATCAACGCGGAG------AAC---GGTACTGCGGCAAGT---AAA---AGC---GCC---TTC---AAT---GCCTTG---AAGTGGATTGTTTCCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-TAVRA-AL------------FWK-LLVASLVMLIFGFVGE---V------G--T-----------M----------------------AY------WPA-FAIGMAGWLYILYEI-----F--V-GEASKINAE--N-GTAAS-K-S-A-F-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928828 [unk-Proteo2-Glaciecola] PRGD_OTU055_7c831f3a01638cd852c84846c97bc4f2 gb|KJ928828| PRGD_OTU055_7c831f3a01638cd852c84846c97bc4f2, putative proteorhodopsin gene, partial cds. PRGD_OTU055_7c831f3a01638cd852c84846c97bc4f2, putative proteorhodopsin gene, partial cds. KJ928828 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTGCTGACGGTACCTCTACAGATCGTCGAGTTCTATCTGATTTTGGCAGCGATCACCGCTGTGCGAGCCGCATTGTTTTGGAAGCTTCTGGTCGCATCGCTTGTCATGCTCATCTTCGGATTTGTCGGCGAAGTCGGTACGATGGCTTACTGGCCGGCATTCGCTATCGGCATGGCTGGTTGGCTGTACATTCTGTATGAAATCTTCGTGGGTGAAGCGAGCAAGATCAATGCGGAAAATGGCACTGCTGCAAGTAAAAGCGCCTTCAATGCCTTGAAGTGGATTGTTTCCGTG LLTVPLQIVEFYLILAAITAVRAALFWKLLVASLVMLIFGFVGEVGTMAYWPAFAIGMAGWLYILYEIFVGEASKINAENGTAASKSAFNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTGACGGTACCTCTACAGATCGTCGAGTTCTATCTGATTTTGGCAGCG---------ATC---ACCGCTGTGCGAGCC---GCATTG------------------------------------TTTTGGAAG---CTTCTGGTCGCATCGCTTGTCATGCTCATCTTCGGATTTGTCGGCGAA---------GTC------------------GGT------ACG---------------------------------ATG------------------------------------------------------------------GCTTAC------------------TGGCCGGCA---TTCGCTATCGGCATGGCTGGTTGGCTGTACATTCTGTATGAAATC---------------TTC------GTG---GGTGAAGCGAGCAAGATCAATGCGGAA------AAT---GGCACTGCTGCAAGT---AAA---AGC---GCC---TTC---AAT---GCCTTG---AAGTGGATTGTTTCCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-TAVRA-AL------------FWK-LLVASLVMLIFGFVGE---V------G--T-----------M----------------------AY------WPA-FAIGMAGWLYILYEI-----F--V-GEASKINAE--N-GTAAS-K-S-A-F-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928830 [unk-Proteo2-Glaciecola] PRGD_OTU055_8b0485340dc8020ed5cc6457411b192e gb|KJ928830| PRGD_OTU055_8b0485340dc8020ed5cc6457411b192e, putative proteorhodopsin gene, partial cds. PRGD_OTU055_8b0485340dc8020ed5cc6457411b192e, putative proteorhodopsin gene, partial cds. KJ928830 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTGCTTACGGTGCCTCTACAAATCGTCGAGTTCTATCTGATCTTGGCAGCGATCACCGCTGTGCGAGCCGCATTGTTTTGGAAGCTTCTGGTCGCATCGCTTGTCATGCTTATCTTCGGATTTGTCGGCGAAGTCGGTACGATGGCTTACTGGCCGGCATTCGCTATCGGCATGGCTGGTTGGTTGTACATTCTGTATGAAATCTTCGTGGGTGAAGCGAGCAAGATCAATGCGGAAAATGGCACTGCTGCAAGTAAAAGCGCCTTCAATGCGTTGAAGTGGATTGTTTCCGTT LLTVPLQIVEFYLILAAITAVRAALFWKLLVASLVMLIFGFVGEVGTMAYWPAFAIGMAGWLYILYEIFVGEASKINAENGTAASKSAFNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTTACGGTGCCTCTACAAATCGTCGAGTTCTATCTGATCTTGGCAGCG---------ATC---ACCGCTGTGCGAGCC---GCATTG------------------------------------TTTTGGAAG---CTTCTGGTCGCATCGCTTGTCATGCTTATCTTCGGATTTGTCGGCGAA---------GTC------------------GGT------ACG---------------------------------ATG------------------------------------------------------------------GCTTAC------------------TGGCCGGCA---TTCGCTATCGGCATGGCTGGTTGGTTGTACATTCTGTATGAAATC---------------TTC------GTG---GGTGAAGCGAGCAAGATCAATGCGGAA------AAT---GGCACTGCTGCAAGT---AAA---AGC---GCC---TTC---AAT---GCGTTG---AAGTGGATTGTTTCCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-TAVRA-AL------------FWK-LLVASLVMLIFGFVGE---V------G--T-----------M----------------------AY------WPA-FAIGMAGWLYILYEI-----F--V-GEASKINAE--N-GTAAS-K-S-A-F-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928836 [unk-Proteo2-Glaciecola] PRGD_OTU055_d8d827c22c40a63ab0c2588e734a8306 gb|KJ928836| PRGD_OTU055_d8d827c22c40a63ab0c2588e734a8306, putative proteorhodopsin gene, partial cds. PRGD_OTU055_d8d827c22c40a63ab0c2588e734a8306, putative proteorhodopsin gene, partial cds. KJ928836 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTGCTGACGGTGCCTCTACAAATTGTCGAGTTCTATCTGATCTTGGCAGCGATCACCGCTGTGCGAGCCGCATTGTTTTGGAAGCTTCTGGTCGCATCGCTTGTCATGCTCATCTTCGGATTTGTCGGCGAAGTCGGTACGATGGCTTACTGGCCGGCATTCGCTATCGGCATGGCTGGTTGGTTGTACATTCTGTATGAAATCTTCGTGGGTGAAGCGAGCAAGATCAATGCGGAAAATGGCACTGCTGCAAGTAAAAGCGCCTTCAATGCCTTGAAGTGGATTGTTTCCGTG LLTVPLQIVEFYLILAAITAVRAALFWKLLVASLVMLIFGFVGEVGTMAYWPAFAIGMAGWLYILYEIFVGEASKINAENGTAASKSAFNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTGACGGTGCCTCTACAAATTGTCGAGTTCTATCTGATCTTGGCAGCG---------ATC---ACCGCTGTGCGAGCC---GCATTG------------------------------------TTTTGGAAG---CTTCTGGTCGCATCGCTTGTCATGCTCATCTTCGGATTTGTCGGCGAA---------GTC------------------GGT------ACG---------------------------------ATG------------------------------------------------------------------GCTTAC------------------TGGCCGGCA---TTCGCTATCGGCATGGCTGGTTGGTTGTACATTCTGTATGAAATC---------------TTC------GTG---GGTGAAGCGAGCAAGATCAATGCGGAA------AAT---GGCACTGCTGCAAGT---AAA---AGC---GCC---TTC---AAT---GCCTTG---AAGTGGATTGTTTCCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-TAVRA-AL------------FWK-LLVASLVMLIFGFVGE---V------G--T-----------M----------------------AY------WPA-FAIGMAGWLYILYEI-----F--V-GEASKINAE--N-GTAAS-K-S-A-F-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928822 [unk-Proteo2-Glaciecola] PRGD_OTU055_otuREP_75b8512174aab57eefd225d07758ca09 gb|KJ928822| PRGD_OTU055_otuREP_75b8512174aab57eefd225d07758ca09, putative proteorhodopsin gene, partial cds. PRGD_OTU055_otuREP_75b8512174aab57eefd225d07758ca09, putative proteorhodopsin gene, partial cds. KJ928822 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTGCTGACGGTGCCTCTACAAATCGTTGAGTTCTATCTGATCTTGGCAGCGATCACCGCTGTGCGAGCCGCACTGTTTTGGAAGCTTCTGGTCGCATCGCTTGTCATGCTCATCTTCGGATTTGTCGGTGAAGTCGGTACGATGGCTTACTGGCCGGCATTCGCTATCGGCATGGCTGGTTGGTTGTACATTCTGTATGAAATCTTCGTGGGTGAAGCGAGCAAGATCAACGCGGAGAACGGTACTGCGGCAAGTAAAAGCGCCTTCAATGCCTTGAAGTGGATTGTTTCCGTG LLTVPLQIVEFYLILAAITAVRAALFWKLLVASLVMLIFGFVGEVGTMAYWPAFAIGMAGWLYILYEIFVGEASKINAENGTAASKSAFNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTGACGGTGCCTCTACAAATCGTTGAGTTCTATCTGATCTTGGCAGCG---------ATC---ACCGCTGTGCGAGCC---GCACTG------------------------------------TTTTGGAAG---CTTCTGGTCGCATCGCTTGTCATGCTCATCTTCGGATTTGTCGGTGAA---------GTC------------------GGT------ACG---------------------------------ATG------------------------------------------------------------------GCTTAC------------------TGGCCGGCA---TTCGCTATCGGCATGGCTGGTTGGTTGTACATTCTGTATGAAATC---------------TTC------GTG---GGTGAAGCGAGCAAGATCAACGCGGAG------AAC---GGTACTGCGGCAAGT---AAA---AGC---GCC---TTC---AAT---GCCTTG---AAGTGGATTGTTTCCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-TAVRA-AL------------FWK-LLVASLVMLIFGFVGE---V------G--T-----------M----------------------AY------WPA-FAIGMAGWLYILYEI-----F--V-GEASKINAE--N-GTAAS-K-S-A-F-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928823 [unk-Proteo2-Glaciecola] PRGD_OTU055_2dae4f93b96b31bb90a7510764d72295 gb|KJ928823| PRGD_OTU055_2dae4f93b96b31bb90a7510764d72295, putative proteorhodopsin gene, partial cds. PRGD_OTU055_2dae4f93b96b31bb90a7510764d72295, putative proteorhodopsin gene, partial cds. KJ928823 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Mediterranean Sea (33.762, 29.175), Indian Ocean (-23.5956, 69.0419) CTTTTGACAGTCCCCCTTCAAATCGTTGAGTTCTACCTCATTTTGGCCGCTATCACGAAAGTCAGAACCGCATTGTTCTGGAAGTTGATGATCGCATCACTGGTCATGCTCATCTTTGGATATGTTGGTGAAGTCGGTGCCATGAGCTATTGGATTGCCTTCGGTATCGGTATGGCTGGCTGGCTCTACATCCTCTATGAAATCTTTGCTGGTGAAGCCAGTCAAATCAATGCTGCCAATGGAACCGCTGCAAGTAAAGCTGCTTTCAATGCATTGAAATGGATTGTCTCCGTT LLTVPLQIVEFYLILAAITKVRTALFWKLMIASLVMLIFGYVGEVGAMSYWIAFGIGMAGWLYILYEIFAGEASQINAANGTAASKAAFNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTGACAGTCCCCCTTCAAATCGTTGAGTTCTACCTCATTTTGGCCGCT---------ATC---ACGAAAGTCAGAACC---GCATTG------------------------------------TTCTGGAAG---TTGATGATCGCATCACTGGTCATGCTCATCTTTGGATATGTTGGTGAA---------GTC------------------GGT------GCC---------------------------------ATG------------------------------------------------------------------AGCTAT------------------TGGATTGCC---TTCGGTATCGGTATGGCTGGCTGGCTCTACATCCTCTATGAAATC---------------TTT------GCT---GGTGAAGCCAGTCAAATCAATGCTGCC------AAT---GGAACCGCTGCAAGT---AAA---GCT---GCT---TTC---AAT---GCATTG---AAATGGATTGTCTCCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-TKVRT-AL------------FWK-LMIASLVMLIFGYVGE---V------G--A-----------M----------------------SY------WIA-FGIGMAGWLYILYEI-----F--A-GEASQINAA--N-GTAAS-K-A-A-F-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928825 [unk-Proteo2-Glaciecola] PRGD_OTU055_3558be76b6c928424a6dfd22dfdccf7d gb|KJ928825| PRGD_OTU055_3558be76b6c928424a6dfd22dfdccf7d, putative proteorhodopsin gene, partial cds. PRGD_OTU055_3558be76b6c928424a6dfd22dfdccf7d, putative proteorhodopsin gene, partial cds. KJ928825 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTTTGACAGTCCCCCTTCAAATCGTTGAGTTTTACCTTATTTTGGCCGCTATCACGAAAGTCCGAACCGCATTGTTCTGGAAGCTGATGATCGCATCACTGGTCATGCTCATTTTTGGATATGTCGGTGAAGTCGGAGCCATGAGCTACTGGATTGCTTTCGGTATCGGTATGGCTGGCTGGCTCTACATTCTCTATGAAATCTTTGCTGGTGAAGCCAGTCAAATCAATGCTGCCAATGGAACCGCTGCAAGTAAAGCTGCTTTCAATGCACTGAAGTGGATTGTATCCGTT LLTVPLQIVEFYLILAAITKVRTALFWKLMIASLVMLIFGYVGEVGAMSYWIAFGIGMAGWLYILYEIFAGEASQINAANGTAASKAAFNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTGACAGTCCCCCTTCAAATCGTTGAGTTTTACCTTATTTTGGCCGCT---------ATC---ACGAAAGTCCGAACC---GCATTG------------------------------------TTCTGGAAG---CTGATGATCGCATCACTGGTCATGCTCATTTTTGGATATGTCGGTGAA---------GTC------------------GGA------GCC---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGATTGCT---TTCGGTATCGGTATGGCTGGCTGGCTCTACATTCTCTATGAAATC---------------TTT------GCT---GGTGAAGCCAGTCAAATCAATGCTGCC------AAT---GGAACCGCTGCAAGT---AAA---GCT---GCT---TTC---AAT---GCACTG---AAGTGGATTGTATCCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-TKVRT-AL------------FWK-LMIASLVMLIFGYVGE---V------G--A-----------M----------------------SY------WIA-FGIGMAGWLYILYEI-----F--A-GEASQINAA--N-GTAAS-K-A-A-F-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928831 [unk-Proteo2-Glaciecola] PRGD_OTU055_947d3282d60b709cfad612b7769b7151 gb|KJ928831| PRGD_OTU055_947d3282d60b709cfad612b7769b7151, putative proteorhodopsin gene, partial cds. PRGD_OTU055_947d3282d60b709cfad612b7769b7151, putative proteorhodopsin gene, partial cds. KJ928831 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTCTTACGGTTCCGTTGCAGATCGTTGAGTTCTACTTGATCTTAGCAGCGATAACGAAAGTGAGAACGGCTCTCTTCTGGAAACTCTTGGTTGCATCATTGGTCATGCTCATCTTTGGCTATGTTGGTGAAGTTGGTGCAATGAGCTACTGGATTGCCTTTGCCATCGGAATGGCTGGCTGGATTTACATTCTCTATGAAATCTTTGCGGGTGAAGCCAGTCAAATCAATGCTTCTAATGGAACAGCTGCCAGTAAAGCTGCTTTCAATGCGCTGAAGTGGATTGTCTCTGTT LLTVPLQIVEFYLILAAITKVRTALFWKLLVASLVMLIFGYVGEVGAMSYWIAFAIGMAGWIYILYEIFAGEASQINASNGTAASKAAFNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTTACGGTTCCGTTGCAGATCGTTGAGTTCTACTTGATCTTAGCAGCG---------ATA---ACGAAAGTGAGAACG---GCTCTC------------------------------------TTCTGGAAA---CTCTTGGTTGCATCATTGGTCATGCTCATCTTTGGCTATGTTGGTGAA---------GTT------------------GGT------GCA---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGATTGCC---TTTGCCATCGGAATGGCTGGCTGGATTTACATTCTCTATGAAATC---------------TTT------GCG---GGTGAAGCCAGTCAAATCAATGCTTCT------AAT---GGAACAGCTGCCAGT---AAA---GCT---GCT---TTC---AAT---GCGCTG---AAGTGGATTGTCTCTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-TKVRT-AL------------FWK-LLVASLVMLIFGYVGE---V------G--A-----------M----------------------SY------WIA-FAIGMAGWIYILYEI-----F--A-GEASQINAS--N-GTAAS-K-A-A-F-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928832 [unk-Proteo2-Glaciecola] PRGD_OTU055_9e881b62a651b6f8efd057b9992c149a gb|KJ928832| PRGD_OTU055_9e881b62a651b6f8efd057b9992c149a, putative proteorhodopsin gene, partial cds. PRGD_OTU055_9e881b62a651b6f8efd057b9992c149a, putative proteorhodopsin gene, partial cds. KJ928832 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTTCTTACGGTTCCGTTGCAGATCGTTGAGTTCTACTTGATCTTAGCAGCGATAACGAAAGTGAGAACGGCTCTCTTCTGGAAACTCTTGGTTGCATCATTGGTCATGCTCATCTTTGGCTATGTTGGTGAAGTTGGTGCAATGAGCTACTGGATTGCCTTTGCCATCGGAATGGCTGGCTGGATTTACATTCTCTATGAAATCTTTGCAGGTGAAGCCAGTCAAATCAATGCTTCAAATGGAACAGCTGCCAGTAAAGCTGCTTTCAATGCGCTGAAGTGGATTGTCTCTGTT LLTVPLQIVEFYLILAAITKVRTALFWKLLVASLVMLIFGYVGEVGAMSYWIAFAIGMAGWIYILYEIFAGEASQINASNGTAASKAAFNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTTACGGTTCCGTTGCAGATCGTTGAGTTCTACTTGATCTTAGCAGCG---------ATA---ACGAAAGTGAGAACG---GCTCTC------------------------------------TTCTGGAAA---CTCTTGGTTGCATCATTGGTCATGCTCATCTTTGGCTATGTTGGTGAA---------GTT------------------GGT------GCA---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGATTGCC---TTTGCCATCGGAATGGCTGGCTGGATTTACATTCTCTATGAAATC---------------TTT------GCA---GGTGAAGCCAGTCAAATCAATGCTTCA------AAT---GGAACAGCTGCCAGT---AAA---GCT---GCT---TTC---AAT---GCGCTG---AAGTGGATTGTCTCTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-TKVRT-AL------------FWK-LLVASLVMLIFGYVGE---V------G--A-----------M----------------------SY------WIA-FAIGMAGWIYILYEI-----F--A-GEASQINAS--N-GTAAS-K-A-A-F-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928835 [unk-Proteo2-Glaciecola] PRGD_OTU055_cbebd36eb79ca6b3bb02f90cd0660343 gb|KJ928835| PRGD_OTU055_cbebd36eb79ca6b3bb02f90cd0660343, putative proteorhodopsin gene, partial cds. PRGD_OTU055_cbebd36eb79ca6b3bb02f90cd0660343, putative proteorhodopsin gene, partial cds. KJ928835 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTATTAACGGTCCCATTGCAGATAGTAGAGTTTTACCTCATATTGGCTGCAATCACGAAGGTCAGAACAGCATTGTTCTGGAAATTGCTTACCGCATCACTTGTGATGCTCATTTTCGGCTATGTCGGTGAAGTTAATGCCATGAACTATTGGGCAGCCTTTGCTATTGGTATGGCCGGATGGATCTACATTTTGTATGAAATCTTTGTTGGTGAAGCCAGCCAAATTAATGCAGCCAATGGTACTGCTGCAAGTAAAGCTGCATTCAATGCACTCAAGTGGATTGTATCGGTT LLTVPLQIVEFYLILAAITKVRTALFWKLLTASLVMLIFGYVGEVNAMNYWAAFAIGMAGWIYILYEIFVGEASQINAANGTAASKAAFNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACGGTCCCATTGCAGATAGTAGAGTTTTACCTCATATTGGCTGCA---------ATC---ACGAAGGTCAGAACA---GCATTG------------------------------------TTCTGGAAA---TTGCTTACCGCATCACTTGTGATGCTCATTTTCGGCTATGTCGGTGAA---------GTT------------------AAT------GCC---------------------------------ATG------------------------------------------------------------------AACTAT------------------TGGGCAGCC---TTTGCTATTGGTATGGCCGGATGGATCTACATTTTGTATGAAATC---------------TTT------GTT---GGTGAAGCCAGCCAAATTAATGCAGCC------AAT---GGTACTGCTGCAAGT---AAA---GCT---GCA---TTC---AAT---GCACTC---AAGTGGATTGTATCGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-TKVRT-AL------------FWK-LLTASLVMLIFGYVGE---V------N--A-----------M----------------------NY------WAA-FAIGMAGWIYILYEI-----F--V-GEASQINAA--N-GTAAS-K-A-A-F-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928895 [unk-Proteo2-Glaciecola] PRGD_OTU059_a85bf67a9ccb401a03a8e8fccd61d6be gb|KJ928895| PRGD_OTU059_a85bf67a9ccb401a03a8e8fccd61d6be, putative proteorhodopsin gene, partial cds. PRGD_OTU059_a85bf67a9ccb401a03a8e8fccd61d6be, putative proteorhodopsin gene, partial cds. KJ928895 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTATTAACCGTGCCTCTGCAGATAGTCGAGTTTTACTTGATCCTTGCTGCAATAGCCATAGTTCGAGCTGCGTTGTTCTGGAAGTTGATGATCGCCTCACTAGTGATGCTGATCTTCGGATTCTTGGGTGAAGCTAACCTAATGAACTACTGGTTAGGATTTGCTATTGGTATGGCTGGGTGGGGATATATCCTCTATGAAATTTTCCTCGGCGAAGCAAGCCAGATCAGTGCTGCTCAAGGCACTGAGGCAAGTAAAACCGCCTTCAACGCCCTCAGGCTGATTGTATCTATT LLTVPLQIVEFYLILAAIAIVRAALFWKLMIASLVMLIFGFLGEANLMNYWLGFAIGMAGWGYILYEIFLGEASQISAAQGTEASKTAFNALRLIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACCGTGCCTCTGCAGATAGTCGAGTTTTACTTGATCCTTGCTGCA---------ATA---GCCATAGTTCGAGCT---GCGTTG------------------------------------TTCTGGAAG---TTGATGATCGCCTCACTAGTGATGCTGATCTTCGGATTCTTGGGTGAA---------GCT------------------AAC------CTA---------------------------------ATG------------------------------------------------------------------AACTAC------------------TGGTTAGGA---TTTGCTATTGGTATGGCTGGGTGGGGATATATCCTCTATGAAATT---------------TTC------CTC---GGCGAAGCAAGCCAGATCAGTGCTGCT------CAA---GGCACTGAGGCAAGT---AAA---ACC---GCC---TTC---AAC---GCCCTC---AGGCTGATTGTATCTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AIVRA-AL------------FWK-LMIASLVMLIFGFLGE---A------N--L-----------M----------------------NY------WLG-FAIGMAGWGYILYEI-----F--L-GEASQISAA--Q-GTEAS-K-T-A-F-N-AL-RLIVSI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928892 [unk-Proteo2-Glaciecola] PRGD_OTU059_8678344d046c5f1b2408eeda355646be gb|KJ928892| PRGD_OTU059_8678344d046c5f1b2408eeda355646be, putative proteorhodopsin gene, partial cds. PRGD_OTU059_8678344d046c5f1b2408eeda355646be, putative proteorhodopsin gene, partial cds. KJ928892 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (33.762, 29.175), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTATTAACCGTGCCTCTGCAGATCGTCGAGTTTTACTTGATCCTTGCTGCAATAGCCATAGTTCGAGCTGCGTTGTTCTGGAAGCTGATGATCGCCTCACTAGTGATGCTGATCTTCGGATTCTTGGGTGAAGCTAACCTAATGAACTACTGGTTAGGATTTGCTATTGGTATGGCTGGGTGGGGATATATCCTCTATGAAATTTTCCTCGGCGAAGCAAGCCAGATCAGTGCTGCTCAAGGCACTGAGGCAAGTAAAACCGCCTTCAACGCCCTCAGACTGATTGTATCTATT LLTVPLQIVEFYLILAAIAIVRAALFWKLMIASLVMLIFGFLGEANLMNYWLGFAIGMAGWGYILYEIFLGEASQISAAQGTEASKTAFNALRLIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACCGTGCCTCTGCAGATCGTCGAGTTTTACTTGATCCTTGCTGCA---------ATA---GCCATAGTTCGAGCT---GCGTTG------------------------------------TTCTGGAAG---CTGATGATCGCCTCACTAGTGATGCTGATCTTCGGATTCTTGGGTGAA---------GCT------------------AAC------CTA---------------------------------ATG------------------------------------------------------------------AACTAC------------------TGGTTAGGA---TTTGCTATTGGTATGGCTGGGTGGGGATATATCCTCTATGAAATT---------------TTC------CTC---GGCGAAGCAAGCCAGATCAGTGCTGCT------CAA---GGCACTGAGGCAAGT---AAA---ACC---GCC---TTC---AAC---GCCCTC---AGACTGATTGTATCTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AIVRA-AL------------FWK-LMIASLVMLIFGFLGE---A------N--L-----------M----------------------NY------WLG-FAIGMAGWGYILYEI-----F--L-GEASQISAA--Q-GTEAS-K-T-A-F-N-AL-RLIVSI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928889 [unk-Proteo2-Glaciecola] PRGD_OTU059_5c4215b4044c957400e07dbfffdccdc7 gb|KJ928889| PRGD_OTU059_5c4215b4044c957400e07dbfffdccdc7, putative proteorhodopsin gene, partial cds. PRGD_OTU059_5c4215b4044c957400e07dbfffdccdc7, putative proteorhodopsin gene, partial cds. KJ928889 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) CTATTAACCGTGCCTCTGCAGATAGTCGAGTTCTACTTGATCCTTGCTGCAATAGCCATAGTTCGAGCTGCGTTGTTCTGGAAGCTGATGATCGCCTCACTAGTGATGCTGATCTTCGGATTCTTGGGTGAAGCTGGCCTAATGAACTACTGGTTAGGATTTGCTATTGGTATGGCCGGGTGGGGATATATCCTCTATGAAATTTTCCTCGGCGAAGCAAGCCAGATCAGTGCTGCTCAGGGCACTGAGGCAAGTAAAACCGCCTTCAACGCCCTCAGGCTGATTGTATCTATT LLTVPLQIVEFYLILAAIAIVRAALFWKLMIASLVMLIFGFLGEAGLMNYWLGFAIGMAGWGYILYEIFLGEASQISAAQGTEASKTAFNALRLIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACCGTGCCTCTGCAGATAGTCGAGTTCTACTTGATCCTTGCTGCA---------ATA---GCCATAGTTCGAGCT---GCGTTG------------------------------------TTCTGGAAG---CTGATGATCGCCTCACTAGTGATGCTGATCTTCGGATTCTTGGGTGAA---------GCT------------------GGC------CTA---------------------------------ATG------------------------------------------------------------------AACTAC------------------TGGTTAGGA---TTTGCTATTGGTATGGCCGGGTGGGGATATATCCTCTATGAAATT---------------TTC------CTC---GGCGAAGCAAGCCAGATCAGTGCTGCT------CAG---GGCACTGAGGCAAGT---AAA---ACC---GCC---TTC---AAC---GCCCTC---AGGCTGATTGTATCTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AIVRA-AL------------FWK-LMIASLVMLIFGFLGE---A------G--L-----------M----------------------NY------WLG-FAIGMAGWGYILYEI-----F--L-GEASQISAA--Q-GTEAS-K-T-A-F-N-AL-RLIVSI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928888 [unk-Proteo2-Glaciecola] PRGD_OTU059_26061abfec0b761237155abc872e3a20 gb|KJ928888| PRGD_OTU059_26061abfec0b761237155abc872e3a20, putative proteorhodopsin gene, partial cds. PRGD_OTU059_26061abfec0b761237155abc872e3a20, putative proteorhodopsin gene, partial cds. KJ928888 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGTTAACGGTGCCTTTGCAGATCGTTGAGTTCTATTTGATTCTGGCTGCAATTGCCATAGTTCGAGCTGCCTTATTCTGGAAGCTGATGATTGCCTCACTAGTGATGTTGATCTTTGGATTCTTGGGTGAAGCTGGCCTAATGAATTACTGGCTAGGATTTGCTGTTGGTATGGCTGGATGGCTATACATCCTCTATGAAATCTTTGCCGGAGAAGCAAGTCAGATAAGTGCAGCTCAGGGCACCGAGGCAAGTAAAACCGCCTTCAATGCTCTTCGTCTGATTGTATCTATT LLTVPLQIVEFYLILAAIAIVRAALFWKLMIASLVMLIFGFLGEAGLMNYWLGFAVGMAGWLYILYEIFAGEASQISAAQGTEASKTAFNALRLIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACGGTGCCTTTGCAGATCGTTGAGTTCTATTTGATTCTGGCTGCA---------ATT---GCCATAGTTCGAGCT---GCCTTA------------------------------------TTCTGGAAG---CTGATGATTGCCTCACTAGTGATGTTGATCTTTGGATTCTTGGGTGAA---------GCT------------------GGC------CTA---------------------------------ATG------------------------------------------------------------------AATTAC------------------TGGCTAGGA---TTTGCTGTTGGTATGGCTGGATGGCTATACATCCTCTATGAAATC---------------TTT------GCC---GGAGAAGCAAGTCAGATAAGTGCAGCT------CAG---GGCACCGAGGCAAGT---AAA---ACC---GCC---TTC---AAT---GCTCTT---CGTCTGATTGTATCTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AIVRA-AL------------FWK-LMIASLVMLIFGFLGE---A------G--L-----------M----------------------NY------WLG-FAVGMAGWLYILYEI-----F--A-GEASQISAA--Q-GTEAS-K-T-A-F-N-AL-RLIVSI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928886 [unk-Proteo2-Glaciecola] PRGD_OTU059_otuREP_4b0e21b681b581ea94690949df57a00f gb|KJ928886| PRGD_OTU059_otuREP_4b0e21b681b581ea94690949df57a00f, putative proteorhodopsin gene, partial cds. PRGD_OTU059_otuREP_4b0e21b681b581ea94690949df57a00f, putative proteorhodopsin gene, partial cds. KJ928886 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; ; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTGTTAACGGTGCCTTTGCAGATCGTTGAGTTCTATTTGATTCTGGCTGCAATTGCTATAGTTCGAGCTGCCTTGTTCTGGAAGCTGATGATTGCCTCACTAGTGATGTTGATCTTTGGATTCTTGGGTGAAGCTGGCCTAATGAATTACTGGCTAGGATTTGCTGTTGGTATGGCTGGATGGCTATATATCCTCTATGAAATCTTTGCCGGAGAAGCAAGCCAGATAAGTGCAGCTCAGGGCACCGAGGCAAGTAAAACCGCCTTCAATGCTCTTCGTCTGATTGTATCTATT LLTVPLQIVEFYLILAAIAIVRAALFWKLMIASLVMLIFGFLGEAGLMNYWLGFAVGMAGWLYILYEIFAGEASQISAAQGTEASKTAFNALRLIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACGGTGCCTTTGCAGATCGTTGAGTTCTATTTGATTCTGGCTGCA---------ATT---GCTATAGTTCGAGCT---GCCTTG------------------------------------TTCTGGAAG---CTGATGATTGCCTCACTAGTGATGTTGATCTTTGGATTCTTGGGTGAA---------GCT------------------GGC------CTA---------------------------------ATG------------------------------------------------------------------AATTAC------------------TGGCTAGGA---TTTGCTGTTGGTATGGCTGGATGGCTATATATCCTCTATGAAATC---------------TTT------GCC---GGAGAAGCAAGCCAGATAAGTGCAGCT------CAG---GGCACCGAGGCAAGT---AAA---ACC---GCC---TTC---AAT---GCTCTT---CGTCTGATTGTATCTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AIVRA-AL------------FWK-LMIASLVMLIFGFLGE---A------G--L-----------M----------------------NY------WLG-FAVGMAGWLYILYEI-----F--A-GEASQISAA--Q-GTEAS-K-T-A-F-N-AL-RLIVSI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928896 [unk-Proteo2-Glaciecola] PRGD_OTU059_c03a71fe0b86020e785793bd89c2571d gb|KJ928896| PRGD_OTU059_c03a71fe0b86020e785793bd89c2571d, putative proteorhodopsin gene, partial cds. PRGD_OTU059_c03a71fe0b86020e785793bd89c2571d, putative proteorhodopsin gene, partial cds. KJ928896 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGTTAACGGTGCCTTTGCAGATCGTTGAGTTCTATTTGATTCTGGCTGCAATTGCCATAGTTCGAGCTGCCTTGTTCTGGAAGCTGATGATTGCCTCACTAGTGATGTTGATCTTTGGATTCTTGGGTGAAGCTGGCCTAATGAATTACTGGCTAGGATTTGCTGTTGGTATGGCTGGATGGCTATATATCCTCTATGAGATCTTTGCCGGAGAAGCAAGCCAGATAAGTGCAGCTCAGGGCACCGAGGCAAGTAAAACCGCCTTCAACGCTCTTCGTCTAATTGTATCTATT LLTVPLQIVEFYLILAAIAIVRAALFWKLMIASLVMLIFGFLGEAGLMNYWLGFAVGMAGWLYILYEIFAGEASQISAAQGTEASKTAFNALRLIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACGGTGCCTTTGCAGATCGTTGAGTTCTATTTGATTCTGGCTGCA---------ATT---GCCATAGTTCGAGCT---GCCTTG------------------------------------TTCTGGAAG---CTGATGATTGCCTCACTAGTGATGTTGATCTTTGGATTCTTGGGTGAA---------GCT------------------GGC------CTA---------------------------------ATG------------------------------------------------------------------AATTAC------------------TGGCTAGGA---TTTGCTGTTGGTATGGCTGGATGGCTATATATCCTCTATGAGATC---------------TTT------GCC---GGAGAAGCAAGCCAGATAAGTGCAGCT------CAG---GGCACCGAGGCAAGT---AAA---ACC---GCC---TTC---AAC---GCTCTT---CGTCTAATTGTATCTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AIVRA-AL------------FWK-LMIASLVMLIFGFLGE---A------G--L-----------M----------------------NY------WLG-FAVGMAGWLYILYEI-----F--A-GEASQISAA--Q-GTEAS-K-T-A-F-N-AL-RLIVSI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928898 [unk-Proteo2-Glaciecola] PRGD_OTU059_cd805493ea384b2123a5f1dff442f1a4 gb|KJ928898| PRGD_OTU059_cd805493ea384b2123a5f1dff442f1a4, putative proteorhodopsin gene, partial cds. PRGD_OTU059_cd805493ea384b2123a5f1dff442f1a4, putative proteorhodopsin gene, partial cds. KJ928898 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-33.28, 45.35) CTATTAACCGTGCCTCTGCAGATCGTTGAGTTCTACTTGATCCTTGCTGCAATAGCCATAGTTCGAGCTGCTTTGTTCTGGAAGTTGATGATTGCATCTTTGGTGATGCTGATCTTTGGGTTTCTGGGCGAAGCTGGCCTAATGAACTACTGGGTAGGATTCATCATCGGCATGGCTGGGTGGTTATATATCCTTTATGAAATCTTTCTTGGCGAAGCAAGTCAGATCAGTGCTGCTCAGGGCACAGAGGCAAGTAAAACCGCATTCAACGCTTTGAGGCTGATTGTATCTATT LLTVPLQIVEFYLILAAIAIVRAALFWKLMIASLVMLIFGFLGEAGLMNYWVGFIIGMAGWLYILYEIFLGEASQISAAQGTEASKTAFNALRLIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACCGTGCCTCTGCAGATCGTTGAGTTCTACTTGATCCTTGCTGCA---------ATA---GCCATAGTTCGAGCT---GCTTTG------------------------------------TTCTGGAAG---TTGATGATTGCATCTTTGGTGATGCTGATCTTTGGGTTTCTGGGCGAA---------GCT------------------GGC------CTA---------------------------------ATG------------------------------------------------------------------AACTAC------------------TGGGTAGGA---TTCATCATCGGCATGGCTGGGTGGTTATATATCCTTTATGAAATC---------------TTT------CTT---GGCGAAGCAAGTCAGATCAGTGCTGCT------CAG---GGCACAGAGGCAAGT---AAA---ACC---GCA---TTC---AAC---GCTTTG---AGGCTGATTGTATCTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AIVRA-AL------------FWK-LMIASLVMLIFGFLGE---A------G--L-----------M----------------------NY------WVG-FIIGMAGWLYILYEI-----F--L-GEASQISAA--Q-GTEAS-K-T-A-F-N-AL-RLIVSI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928887 [unk-Proteo2-Glaciecola] PRGD_OTU059_22bd0572b4856ff323818ab956d606a8 gb|KJ928887| PRGD_OTU059_22bd0572b4856ff323818ab956d606a8, putative proteorhodopsin gene, partial cds. PRGD_OTU059_22bd0572b4856ff323818ab956d606a8, putative proteorhodopsin gene, partial cds. KJ928887 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTATTAACCGTGCCTCTGCAGATCGTTGAGTTCTACTTGATTTTGGCGGCGATAGCCGTAGTCCGAGCTGCTTTATTCTGGAAGCTGATGATCGCCTCACTTGTGATGCTGATCTTTGGATTCCTAGGCGAAGCTGGCTTAATGAACTACTGGGTAGGTTTCATCATCGGCATGGCGGGATGGTTATACATCCTCTATGAAATTTTCCTCGGCGAAGCAAGCCAGATCAGTGCTGCTCAGGGCACTGAGGCAAGTAAAACGGCCTTCAACGCCCTCAGGCTGATTGTATCTATT LLTVPLQIVEFYLILAAIAVVRAALFWKLMIASLVMLIFGFLGEAGLMNYWVGFIIGMAGWLYILYEIFLGEASQISAAQGTEASKTAFNALRLIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACCGTGCCTCTGCAGATCGTTGAGTTCTACTTGATTTTGGCGGCG---------ATA---GCCGTAGTCCGAGCT---GCTTTA------------------------------------TTCTGGAAG---CTGATGATCGCCTCACTTGTGATGCTGATCTTTGGATTCCTAGGCGAA---------GCT------------------GGC------TTA---------------------------------ATG------------------------------------------------------------------AACTAC------------------TGGGTAGGT---TTCATCATCGGCATGGCGGGATGGTTATACATCCTCTATGAAATT---------------TTC------CTC---GGCGAAGCAAGCCAGATCAGTGCTGCT------CAG---GGCACTGAGGCAAGT---AAA---ACG---GCC---TTC---AAC---GCCCTC---AGGCTGATTGTATCTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLIFGFLGE---A------G--L-----------M----------------------NY------WVG-FIIGMAGWLYILYEI-----F--L-GEASQISAA--Q-GTEAS-K-T-A-F-N-AL-RLIVSI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928891 [unk-Proteo2-Glaciecola] PRGD_OTU059_6f68c77614297e7b3b5ab88791a6eaff gb|KJ928891| PRGD_OTU059_6f68c77614297e7b3b5ab88791a6eaff, putative proteorhodopsin gene, partial cds. PRGD_OTU059_6f68c77614297e7b3b5ab88791a6eaff, putative proteorhodopsin gene, partial cds. KJ928891 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTATTAACCGTGCCTCTGCAGATCGTTGAGTTCTACTTGATTTTGGCGGCGATAGCCGTAGTCCGAGCTGCTTTATTCTGGAAGCTGATGATCGCCTCACTTGTGATGCTGATCTTTGGATTCCTAGGCGAAGCTGGCTTAATGAACTACTGGGTAGGTTTCATCATCGGCATGGCTGGATGGTTATACATCCTCTATGAAATTTTCCTCGGCGAAGCAAGCCAGATCAGTGCTGCTCAGGGCACTGAGGCAAGTAAAACGGCCTTCAACGCCCTCAGGTTGATTGTATCTATT LLTVPLQIVEFYLILAAIAVVRAALFWKLMIASLVMLIFGFLGEAGLMNYWVGFIIGMAGWLYILYEIFLGEASQISAAQGTEASKTAFNALRLIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACCGTGCCTCTGCAGATCGTTGAGTTCTACTTGATTTTGGCGGCG---------ATA---GCCGTAGTCCGAGCT---GCTTTA------------------------------------TTCTGGAAG---CTGATGATCGCCTCACTTGTGATGCTGATCTTTGGATTCCTAGGCGAA---------GCT------------------GGC------TTA---------------------------------ATG------------------------------------------------------------------AACTAC------------------TGGGTAGGT---TTCATCATCGGCATGGCTGGATGGTTATACATCCTCTATGAAATT---------------TTC------CTC---GGCGAAGCAAGCCAGATCAGTGCTGCT------CAG---GGCACTGAGGCAAGT---AAA---ACG---GCC---TTC---AAC---GCCCTC---AGGTTGATTGTATCTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLIFGFLGE---A------G--L-----------M----------------------NY------WVG-FIIGMAGWLYILYEI-----F--L-GEASQISAA--Q-GTEAS-K-T-A-F-N-AL-RLIVSI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928890 [unk-Proteo2-Glaciecola] PRGD_OTU059_5c84f5974015ad5a405e41e13f9e85b0 gb|KJ928890| PRGD_OTU059_5c84f5974015ad5a405e41e13f9e85b0, putative proteorhodopsin gene, partial cds. PRGD_OTU059_5c84f5974015ad5a405e41e13f9e85b0, putative proteorhodopsin gene, partial cds. KJ928890 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683) CTATTAACCGTGCCTCTGCAGATCGTTGAGTTCTACTTGATTTTGGCGGCGATAGCCGTAGTCCGAGCTGCTTTATTCTGGAAGCTGATGATCGCCTCACTTGTGATGCTGATCTTTGGATTCCTTGGCGAAGCTGGCTTAATGAACTACTGGGTAGGTTTCATCATCGGCATGGCTGGATGGTTATACATCCTCTATGAAATTTTCCTCGGCGAAGCAAGCCAGATTAGTGCTGCTCAGGGCACTGAGGCAAGTAAAACGGCCTTCAACGCCCTTAGGTTGATTGTATCTATT LLTVPLQIVEFYLILAAIAVVRAALFWKLMIASLVMLIFGFLGEAGLMNYWVGFIIGMAGWLYILYEIFLGEASQISAAQGTEASKTAFNALRLIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACCGTGCCTCTGCAGATCGTTGAGTTCTACTTGATTTTGGCGGCG---------ATA---GCCGTAGTCCGAGCT---GCTTTA------------------------------------TTCTGGAAG---CTGATGATCGCCTCACTTGTGATGCTGATCTTTGGATTCCTTGGCGAA---------GCT------------------GGC------TTA---------------------------------ATG------------------------------------------------------------------AACTAC------------------TGGGTAGGT---TTCATCATCGGCATGGCTGGATGGTTATACATCCTCTATGAAATT---------------TTC------CTC---GGCGAAGCAAGCCAGATTAGTGCTGCT------CAG---GGCACTGAGGCAAGT---AAA---ACG---GCC---TTC---AAC---GCCCTT---AGGTTGATTGTATCTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLIFGFLGE---A------G--L-----------M----------------------NY------WVG-FIIGMAGWLYILYEI-----F--L-GEASQISAA--Q-GTEAS-K-T-A-F-N-AL-RLIVSI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928893 [unk-Proteo2-Glaciecola] PRGD_OTU059_869d4699d0df04b33c1485f7c83fd50c gb|KJ928893| PRGD_OTU059_869d4699d0df04b33c1485f7c83fd50c, putative proteorhodopsin gene, partial cds. PRGD_OTU059_869d4699d0df04b33c1485f7c83fd50c, putative proteorhodopsin gene, partial cds. KJ928893 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTATTAACCGTGCCTCTGCAGATCGTTGAGTTCTACTTGATCTTGGCGGCGATAGCCGTAGTCCGAGCTGCTTTGTTCTGGAAGCTGATGATCGCCTCGCTTGTGATGCTGATCTTCGGATTCTTGGGCGAAGCTGGCTTAATGAACTACTGGGTAGGTTTCATCATCGGTATGCTCGGATGGTTATACATCCTCTATGAAATTTTCCTCGGCGAAGCAAGCCAGATCAGTGCTGCTCAGGGCACTGAGGCAAGTAAAACGGCCTTCAACGCCCTCAGGTTGATTGTATCCATT LLTVPLQIVEFYLILAAIAVVRAALFWKLMIASLVMLIFGFLGEAGLMNYWVGFIIGMLGWLYILYEIFLGEASQISAAQGTEASKTAFNALRLIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACCGTGCCTCTGCAGATCGTTGAGTTCTACTTGATCTTGGCGGCG---------ATA---GCCGTAGTCCGAGCT---GCTTTG------------------------------------TTCTGGAAG---CTGATGATCGCCTCGCTTGTGATGCTGATCTTCGGATTCTTGGGCGAA---------GCT------------------GGC------TTA---------------------------------ATG------------------------------------------------------------------AACTAC------------------TGGGTAGGT---TTCATCATCGGTATGCTCGGATGGTTATACATCCTCTATGAAATT---------------TTC------CTC---GGCGAAGCAAGCCAGATCAGTGCTGCT------CAG---GGCACTGAGGCAAGT---AAA---ACG---GCC---TTC---AAC---GCCCTC---AGGTTGATTGTATCCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLIFGFLGE---A------G--L-----------M----------------------NY------WVG-FIIGMLGWLYILYEI-----F--L-GEASQISAA--Q-GTEAS-K-T-A-F-N-AL-RLIVSI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928900 [unk-Proteo2-Glaciecola] PRGD_OTU059_e4e88aaece241fd14d96eff305a4c47a gb|KJ928900| PRGD_OTU059_e4e88aaece241fd14d96eff305a4c47a, putative proteorhodopsin gene, partial cds. PRGD_OTU059_e4e88aaece241fd14d96eff305a4c47a, putative proteorhodopsin gene, partial cds. KJ928900 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTATTAACCGTGCCTCTGCAGATCGTTGAGTTCTACCTGATCTTGGCGGCGATAGCCGTAGTCCGAGCTGCTTTGTTCTGGAAGCTGATGATCGCCTCGCTTGTGATGCTGATCTTCGGATTCTTGGGCGAAGCTGGCTTAATGAACTACTGGGTAGGTTTCATCATCGGTATGCTCGGATGGTTATACATCCTCTATGAAATTTTCCTCGGCGAAGCAAGCCAGATCAGTGCTGCTCAGGGCACTGAGGCAAGTAAAACGGCCTTCAACGCCCTCAGGTTGATTGTATCTATT LLTVPLQIVEFYLILAAIAVVRAALFWKLMIASLVMLIFGFLGEAGLMNYWVGFIIGMLGWLYILYEIFLGEASQISAAQGTEASKTAFNALRLIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACCGTGCCTCTGCAGATCGTTGAGTTCTACCTGATCTTGGCGGCG---------ATA---GCCGTAGTCCGAGCT---GCTTTG------------------------------------TTCTGGAAG---CTGATGATCGCCTCGCTTGTGATGCTGATCTTCGGATTCTTGGGCGAA---------GCT------------------GGC------TTA---------------------------------ATG------------------------------------------------------------------AACTAC------------------TGGGTAGGT---TTCATCATCGGTATGCTCGGATGGTTATACATCCTCTATGAAATT---------------TTC------CTC---GGCGAAGCAAGCCAGATCAGTGCTGCT------CAG---GGCACTGAGGCAAGT---AAA---ACG---GCC---TTC---AAC---GCCCTC---AGGTTGATTGTATCTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLIFGFLGE---A------G--L-----------M----------------------NY------WVG-FIIGMLGWLYILYEI-----F--L-GEASQISAA--Q-GTEAS-K-T-A-F-N-AL-RLIVSI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928897 [unk-Proteo2-Glaciecola] PRGD_OTU059_c56820f49b705aa48e09365b011804ac gb|KJ928897| PRGD_OTU059_c56820f49b705aa48e09365b011804ac, putative proteorhodopsin gene, partial cds. PRGD_OTU059_c56820f49b705aa48e09365b011804ac, putative proteorhodopsin gene, partial cds. KJ928897 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTATTAACCGTGCCTCTGCAGATCGTTGAGTTCTACTTGATTTTGGCGGCGATAGCCGTAGTCCGAGCTGCTTTGTTCTGGAAGCTAATGATCGCTTCACTTGTGATGCTGATCTTTGGATTCCTTGGCGAAGCTGGCTTAATGAACTATTGGGTAGGTTTCATCATCGGCATGGCTGGATGGTTATATATCATCTACGAAATTTTTGCCGGCGAAGCAAGTCAGATCAGTGCTGCTCAGGGCACAGAGGCAAGTAAAACCGCCTTCAACGCTCTGAGATTGATTGTGACCGTT LLTVPLQIVEFYLILAAIAVVRAALFWKLMIASLVMLIFGFLGEAGLMNYWVGFIIGMAGWLYIIYEIFAGEASQISAAQGTEASKTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACCGTGCCTCTGCAGATCGTTGAGTTCTACTTGATTTTGGCGGCG---------ATA---GCCGTAGTCCGAGCT---GCTTTG------------------------------------TTCTGGAAG---CTAATGATCGCTTCACTTGTGATGCTGATCTTTGGATTCCTTGGCGAA---------GCT------------------GGC------TTA---------------------------------ATG------------------------------------------------------------------AACTAT------------------TGGGTAGGT---TTCATCATCGGCATGGCTGGATGGTTATATATCATCTACGAAATT---------------TTT------GCC---GGCGAAGCAAGTCAGATCAGTGCTGCT------CAG---GGCACAGAGGCAAGT---AAA---ACC---GCC---TTC---AAC---GCTCTG---AGATTGATTGTGACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLIFGFLGE---A------G--L-----------M----------------------NY------WVG-FIIGMAGWLYIIYEI-----F--A-GEASQISAA--Q-GTEAS-K-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928899 [unk-Proteo2-Glaciecola] PRGD_OTU059_db81649005ae11f4fce3859bb496875e gb|KJ928899| PRGD_OTU059_db81649005ae11f4fce3859bb496875e, putative proteorhodopsin gene, partial cds. PRGD_OTU059_db81649005ae11f4fce3859bb496875e, putative proteorhodopsin gene, partial cds. KJ928899 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTATTAACCGTGCCGCTGCAGATCGTTGAGTTCTACTTGATCCTTGCTGCGATAGCCGTAGTTCGAGCTGCTTTGTTCTGGAAGCTGATGATCGCTTCACTTGTGATGCTGATCTTCGGATTTCTGGGCGAAGCTGGCCTAATGAACTACTGGGTAGGATTCATCATCGGCATGGCTGGGTGGTTATATATCATCTACGAAATATTTTTCGGCGAAGCGAGCCAGATCAGTGCTGCTCAGGGCACAGAGGCAAGCAAAACCGCCTTCAACGCTCTCAGACTGATTGTGACTGTT LLTVPLQIVEFYLILAAIAVVRAALFWKLMIASLVMLIFGFLGEAGLMNYWVGFIIGMAGWLYIIYEIFFGEASQISAAQGTEASKTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACCGTGCCGCTGCAGATCGTTGAGTTCTACTTGATCCTTGCTGCG---------ATA---GCCGTAGTTCGAGCT---GCTTTG------------------------------------TTCTGGAAG---CTGATGATCGCTTCACTTGTGATGCTGATCTTCGGATTTCTGGGCGAA---------GCT------------------GGC------CTA---------------------------------ATG------------------------------------------------------------------AACTAC------------------TGGGTAGGA---TTCATCATCGGCATGGCTGGGTGGTTATATATCATCTACGAAATA---------------TTT------TTC---GGCGAAGCGAGCCAGATCAGTGCTGCT------CAG---GGCACAGAGGCAAGC---AAA---ACC---GCC---TTC---AAC---GCTCTC---AGACTGATTGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLIFGFLGE---A------G--L-----------M----------------------NY------WVG-FIIGMAGWLYIIYEI-----F--F-GEASQISAA--Q-GTEAS-K-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ928894 [unk-Proteo2-Glaciecola] PRGD_OTU059_a19ee00bd540dc2da6901f5d17e40264 gb|KJ928894| PRGD_OTU059_a19ee00bd540dc2da6901f5d17e40264, putative proteorhodopsin gene, partial cds. PRGD_OTU059_a19ee00bd540dc2da6901f5d17e40264, putative proteorhodopsin gene, partial cds. KJ928894 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTATTAACCGTGCCTTTGCAGATCGTTGAGTTCTACTTGATCTTGGCGGCGATAGCCGTAGTCCGAGCTGCGTTGTTCTGGAAGCTGATGATCGCCTCACTTGTGATGCTGATCTTCGGATTCTTGGGCGAAGCTAACCTAATGAACTACTACGTAGGATTCGTCATTGGTATGCTCGGATGGCTATACATCCTCTACGAAATCTTCTTCGGTGAAGCGAGTCAGATCAATGCGGCTCAGGGCACAGAAGCTAGTAAAACAGCTTTCAATGCACTGAAGTGGATTGTGACGGTT LLTVPLQIVEFYLILAAIAVVRAALFWKLMIASLVMLIFGFLGEANLMNYYVGFVIGMLGWLYILYEIFFGEASQINAAQGTEASKTAFNALKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACCGTGCCTTTGCAGATCGTTGAGTTCTACTTGATCTTGGCGGCG---------ATA---GCCGTAGTCCGAGCT---GCGTTG------------------------------------TTCTGGAAG---CTGATGATCGCCTCACTTGTGATGCTGATCTTCGGATTCTTGGGCGAA---------GCT------------------AAC------CTA---------------------------------ATG------------------------------------------------------------------AACTAC------------------TACGTAGGA---TTCGTCATTGGTATGCTCGGATGGCTATACATCCTCTACGAAATC---------------TTC------TTC---GGTGAAGCGAGTCAGATCAATGCGGCT------CAG---GGCACAGAAGCTAGT---AAA---ACA---GCT---TTC---AAT---GCACTG---AAGTGGATTGTGACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLIFGFLGE---A------N--L-----------M----------------------NY------YVG-FVIGMLGWLYILYEI-----F--F-GEASQINAA--Q-GTEAS-K-T-A-F-N-AL-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927189 [unk-Proteo2-Glaciecola] PRGD_OTU006_2864349ee4f7d3aae2875e461ec32bf6 gb|KJ927189| PRGD_OTU006_2864349ee4f7d3aae2875e461ec32bf6, putative proteorhodopsin gene, partial cds. PRGD_OTU006_2864349ee4f7d3aae2875e461ec32bf6, putative proteorhodopsin gene, partial cds. KJ927189 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGCTAACTGTTCCGCTACAGATCGTAGAATTCTATCTGATCTTGGCAGCCATCGCGGTAGTTCGCGCAGCGCTGTTCTGGAAACTGATGATCGCGTCACTGGTGATGCTGATCTTTGGTTATCTCGGTGAGCTGGGCGCCATGAACTACTGGTTAGCCTTCGTCATCGGTATGGCGGGATGGATCTATATTATCTACGAGATCTTCGCCGGCGAAGCAAGTCAGATCAACGCGAGCCAGGGTACCGAAGCGAGTAAAACAGCTTTCAACGCCCTGCGCATCATTGTGACCTTT LLTVPLQIVEFYLILAAIAVVRAALFWKLMIASLVMLIFGYLGELGAMNYWLAFVIGMAGWIYIIYEIFAGEASQINASQGTEASKTAFNALRIIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTAACTGTTCCGCTACAGATCGTAGAATTCTATCTGATCTTGGCAGCC---------ATC---GCGGTAGTTCGCGCA---GCGCTG------------------------------------TTCTGGAAA---CTGATGATCGCGTCACTGGTGATGCTGATCTTTGGTTATCTCGGTGAG---------CTG------------------GGC------GCC---------------------------------ATG------------------------------------------------------------------AACTAC------------------TGGTTAGCC---TTCGTCATCGGTATGGCGGGATGGATCTATATTATCTACGAGATC---------------TTC------GCC---GGCGAAGCAAGTCAGATCAACGCGAGC------CAG---GGTACCGAAGCGAGT---AAA---ACA---GCT---TTC---AAC---GCCCTG---CGCATCATTGTGACCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLIFGYLGE---L------G--A-----------M----------------------NY------WLA-FVIGMAGWIYIIYEI-----F--A-GEASQINAS--Q-GTEAS-K-T-A-F-N-AL-RIIVTF-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927196 [unk-Proteo2-Glaciecola] PRGD_OTU006_409bc90ecd2bb92da7270e4073310cb4 gb|KJ927196| PRGD_OTU006_409bc90ecd2bb92da7270e4073310cb4, putative proteorhodopsin gene, partial cds. PRGD_OTU006_409bc90ecd2bb92da7270e4073310cb4, putative proteorhodopsin gene, partial cds. KJ927196 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGCTAACTGTTCCGCTACAGATCGTAGAATTCTATCTGATCTTGGCAGCCATCGCGGTAGTACGCGCAGCGCTGTTCTGGAAACTGATGATCGCGTCACTGGTGATGCTGATCTTTGGTTATCTCGGTGAGCTGGGCGCCATGAACTACTGGTTAGCCTTCTTCATCGGTATGGCGGGATGGATCTATATTATCTACGAGATCTTCGCCGGCGAAGCCAGTAAGATCAACGCGAGCCAGGGTACCGAAGCGAGTAAAACAGCTTTCAACGCCCTGCGCATCATTGTGACCTTT LLTVPLQIVEFYLILAAIAVVRAALFWKLMIASLVMLIFGYLGELGAMNYWLAFFIGMAGWIYIIYEIFAGEASKINASQGTEASKTAFNALRIIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTAACTGTTCCGCTACAGATCGTAGAATTCTATCTGATCTTGGCAGCC---------ATC---GCGGTAGTACGCGCA---GCGCTG------------------------------------TTCTGGAAA---CTGATGATCGCGTCACTGGTGATGCTGATCTTTGGTTATCTCGGTGAG---------CTG------------------GGC------GCC---------------------------------ATG------------------------------------------------------------------AACTAC------------------TGGTTAGCC---TTCTTCATCGGTATGGCGGGATGGATCTATATTATCTACGAGATC---------------TTC------GCC---GGCGAAGCCAGTAAGATCAACGCGAGC------CAG---GGTACCGAAGCGAGT---AAA---ACA---GCT---TTC---AAC---GCCCTG---CGCATCATTGTGACCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLIFGYLGE---L------G--A-----------M----------------------NY------WLA-FFIGMAGWIYIIYEI-----F--A-GEASKINAS--Q-GTEAS-K-T-A-F-N-AL-RIIVTF-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927232 [unk-Proteo2-Glaciecola] PRGD_OTU006_c54a7e1de391d6c4d53a019d1f8771cb gb|KJ927232| PRGD_OTU006_c54a7e1de391d6c4d53a019d1f8771cb, putative proteorhodopsin gene, partial cds. PRGD_OTU006_c54a7e1de391d6c4d53a019d1f8771cb, putative proteorhodopsin gene, partial cds. KJ927232 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) TTGCTAACTGTTCCGCTACAGATCGTAGAATTCTATCTGATCTTGGCAGCCATCGCGGTAGTGCGCGCAGCGCTGTTCTGGAAACTGATGATCGCGTCACTGGTGATGCTGATCTTTGGTTACCTCGGCGAGCTGGGCGCTATGAACTACTGGTTAGCCTTCTTCATCGGTATGGCGGGATGGATCTATATTATCTATGAGATCTTCTTCGGCGAAGCCAGTCAGATCAACGCGAGCCAGGGTACCGAAGCGAGTAAAACAGCTTTCAACGCCCTGCGCATCATTGTGACCTTT LLTVPLQIVEFYLILAAIAVVRAALFWKLMIASLVMLIFGYLGELGAMNYWLAFFIGMAGWIYIIYEIFFGEASQINASQGTEASKTAFNALRIIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTAACTGTTCCGCTACAGATCGTAGAATTCTATCTGATCTTGGCAGCC---------ATC---GCGGTAGTGCGCGCA---GCGCTG------------------------------------TTCTGGAAA---CTGATGATCGCGTCACTGGTGATGCTGATCTTTGGTTACCTCGGCGAG---------CTG------------------GGC------GCT---------------------------------ATG------------------------------------------------------------------AACTAC------------------TGGTTAGCC---TTCTTCATCGGTATGGCGGGATGGATCTATATTATCTATGAGATC---------------TTC------TTC---GGCGAAGCCAGTCAGATCAACGCGAGC------CAG---GGTACCGAAGCGAGT---AAA---ACA---GCT---TTC---AAC---GCCCTG---CGCATCATTGTGACCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLIFGYLGE---L------G--A-----------M----------------------NY------WLA-FFIGMAGWIYIIYEI-----F--F-GEASQINAS--Q-GTEAS-K-T-A-F-N-AL-RIIVTF-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927185 [unk-Proteo2-Glaciecola] PRGD_OTU006_1cde71aabca98afb9783170103290b18 gb|KJ927185| PRGD_OTU006_1cde71aabca98afb9783170103290b18, putative proteorhodopsin gene, partial cds. PRGD_OTU006_1cde71aabca98afb9783170103290b18, putative proteorhodopsin gene, partial cds. KJ927185 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGCTAACTGTTCCGCTACAGATCGTAGAATTCTATCTGATCTTGGCAGCCATCGCGGTAGTACGCGCAGCGCTGTTCTGGAAACTGATGATCGCGTCATTGGTGATGCTGATCTTTGGTTATCTCGGTGAGCTGGGCGCTATGAACTACTGGTTAGCCTTCATCATCGGTATGGCGGGATGGATCTATATTATCTACGAGATCTTCGCCGGCGAAGCCAGTCAGATCAACGCGAGCCAGGGTACCGAAGCGAGTAAAACAGCTTTCAACGCCCTGCGCATCATTGTGACCTTT LLTVPLQIVEFYLILAAIAVVRAALFWKLMIASLVMLIFGYLGELGAMNYWLAFIIGMAGWIYIIYEIFAGEASQINASQGTEASKTAFNALRIIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTAACTGTTCCGCTACAGATCGTAGAATTCTATCTGATCTTGGCAGCC---------ATC---GCGGTAGTACGCGCA---GCGCTG------------------------------------TTCTGGAAA---CTGATGATCGCGTCATTGGTGATGCTGATCTTTGGTTATCTCGGTGAG---------CTG------------------GGC------GCT---------------------------------ATG------------------------------------------------------------------AACTAC------------------TGGTTAGCC---TTCATCATCGGTATGGCGGGATGGATCTATATTATCTACGAGATC---------------TTC------GCC---GGCGAAGCCAGTCAGATCAACGCGAGC------CAG---GGTACCGAAGCGAGT---AAA---ACA---GCT---TTC---AAC---GCCCTG---CGCATCATTGTGACCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLIFGYLGE---L------G--A-----------M----------------------NY------WLA-FIIGMAGWIYIIYEI-----F--A-GEASQINAS--Q-GTEAS-K-T-A-F-N-AL-RIIVTF-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927236 [unk-Proteo2-Glaciecola] PRGD_OTU006_d244fbfbb77f120e538842a1bf4651ae gb|KJ927236| PRGD_OTU006_d244fbfbb77f120e538842a1bf4651ae, putative proteorhodopsin gene, partial cds. PRGD_OTU006_d244fbfbb77f120e538842a1bf4651ae, putative proteorhodopsin gene, partial cds. KJ927236 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTGCTAACTGTTCCGCTACAGATCGTAGAATTCTATCTGATCTTGGCAGCCATCGCGGTAGTACGCGCAGCGCTGTTCTGGAAACTGATGATCGCGTCACTTGTGATGCTGATCTTTGGTTATCTCGGTGAGCTGGGCGCTATGAACTACTGGTTAGCCTTCATCATCGGTATGGCGGGCTGGATCTATATTATCTACGAGATCTTCGCCGGCGAAGCCAGTCAGATCAACGCAAGCCAGGGTACCGAAGCGAGTAAAACAGCGTTCAACGCCCTGCGCATCATCGTGACCTTT LLTVPLQIVEFYLILAAIAVVRAALFWKLMIASLVMLIFGYLGELGAMNYWLAFIIGMAGWIYIIYEIFAGEASQINASQGTEASKTAFNALRIIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTAACTGTTCCGCTACAGATCGTAGAATTCTATCTGATCTTGGCAGCC---------ATC---GCGGTAGTACGCGCA---GCGCTG------------------------------------TTCTGGAAA---CTGATGATCGCGTCACTTGTGATGCTGATCTTTGGTTATCTCGGTGAG---------CTG------------------GGC------GCT---------------------------------ATG------------------------------------------------------------------AACTAC------------------TGGTTAGCC---TTCATCATCGGTATGGCGGGCTGGATCTATATTATCTACGAGATC---------------TTC------GCC---GGCGAAGCCAGTCAGATCAACGCAAGC------CAG---GGTACCGAAGCGAGT---AAA---ACA---GCG---TTC---AAC---GCCCTG---CGCATCATCGTGACCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLIFGYLGE---L------G--A-----------M----------------------NY------WLA-FIIGMAGWIYIIYEI-----F--A-GEASQINAS--Q-GTEAS-K-T-A-F-N-AL-RIIVTF-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927219 [unk-Proteo2-Glaciecola] PRGD_OTU006_97b12b7a7095aa8166bac813dfe64b62 gb|KJ927219| PRGD_OTU006_97b12b7a7095aa8166bac813dfe64b62, putative proteorhodopsin gene, partial cds. PRGD_OTU006_97b12b7a7095aa8166bac813dfe64b62, putative proteorhodopsin gene, partial cds. KJ927219 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTGCTAACTGTTCCGCTACAGATCGTAGAATTCTATCTGATCTTGGCAGCCATCGCGGTAGTACGCGCAGCGCTGTTCTGGAAACTGATGATCGCGTCACTGGTGATGCTGATCTTTGGTTATCTCGGTGAGCTGGGCGCTATGAACTACTGGTTAGCCTTCATCATCGGTATGGCAGGATGGATCTATATTATCTACGAGATCTTCGCCGGCGAAGCCAGTCAGATCAACGCGAGCCAGGGTACCGAAGCGAGTAAAACAGCTTTCAACGCCCTGCGCATCATTGTGACCTTT LLTVPLQIVEFYLILAAIAVVRAALFWKLMIASLVMLIFGYLGELGAMNYWLAFIIGMAGWIYIIYEIFAGEASQINASQGTEASKTAFNALRIIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTAACTGTTCCGCTACAGATCGTAGAATTCTATCTGATCTTGGCAGCC---------ATC---GCGGTAGTACGCGCA---GCGCTG------------------------------------TTCTGGAAA---CTGATGATCGCGTCACTGGTGATGCTGATCTTTGGTTATCTCGGTGAG---------CTG------------------GGC------GCT---------------------------------ATG------------------------------------------------------------------AACTAC------------------TGGTTAGCC---TTCATCATCGGTATGGCAGGATGGATCTATATTATCTACGAGATC---------------TTC------GCC---GGCGAAGCCAGTCAGATCAACGCGAGC------CAG---GGTACCGAAGCGAGT---AAA---ACA---GCT---TTC---AAC---GCCCTG---CGCATCATTGTGACCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLIFGYLGE---L------G--A-----------M----------------------NY------WLA-FIIGMAGWIYIIYEI-----F--A-GEASQINAS--Q-GTEAS-K-T-A-F-N-AL-RIIVTF-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927215 [unk-Proteo2-Glaciecola] PRGD_OTU006_93bd3ea332607dc8c47ba82299f3585e gb|KJ927215| PRGD_OTU006_93bd3ea332607dc8c47ba82299f3585e, putative proteorhodopsin gene, partial cds. PRGD_OTU006_93bd3ea332607dc8c47ba82299f3585e, putative proteorhodopsin gene, partial cds. KJ927215 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) TTGCTGACTGTTCCGCTACAGATCGTTGAATTTTATCTGATCTTGGCAGCCATCGCCGTAGTACGCGCAGCGCTGTTCTGGAAACTGATGATCGCGTCGCTCGTGATGCTGATCTTTGGTTATCTTGGTGAGCTGGGCGCTATGAACTACTGGCTGGCCTTCATCATCGGTATGCTGGGATGGATCTATATTATCTACGAGATCTTCTTCGGCGAAGCCAGTCAGATCAACGCGAGTCAAGGTACCGAAGCGAGTAAAACAGCTTTCAGCGCCTTGCGCATCATCGTGACCTTT LLTVPLQIVEFYLILAAIAVVRAALFWKLMIASLVMLIFGYLGELGAMNYWLAFIIGMLGWIYIIYEIFFGEASQINASQGTEASKTAFSALRIIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTGACTGTTCCGCTACAGATCGTTGAATTTTATCTGATCTTGGCAGCC---------ATC---GCCGTAGTACGCGCA---GCGCTG------------------------------------TTCTGGAAA---CTGATGATCGCGTCGCTCGTGATGCTGATCTTTGGTTATCTTGGTGAG---------CTG------------------GGC------GCT---------------------------------ATG------------------------------------------------------------------AACTAC------------------TGGCTGGCC---TTCATCATCGGTATGCTGGGATGGATCTATATTATCTACGAGATC---------------TTC------TTC---GGCGAAGCCAGTCAGATCAACGCGAGT------CAA---GGTACCGAAGCGAGT---AAA---ACA---GCT---TTC---AGC---GCCTTG---CGCATCATCGTGACCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLIFGYLGE---L------G--A-----------M----------------------NY------WLA-FIIGMLGWIYIIYEI-----F--F-GEASQINAS--Q-GTEAS-K-T-A-F-S-AL-RIIVTF-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927235 [unk-Proteo2-Glaciecola] PRGD_OTU006_cff893e9ccfed02b0eeac0de0038312e gb|KJ927235| PRGD_OTU006_cff893e9ccfed02b0eeac0de0038312e, putative proteorhodopsin gene, partial cds. PRGD_OTU006_cff893e9ccfed02b0eeac0de0038312e, putative proteorhodopsin gene, partial cds. KJ927235 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTGCTGACTGTTCCGCTACAGATCGTTGAATTTTATCTGATCTTGGCAGCAATCGCGGTAGTACGCGCAGCGCTGTTCTGGAAACTGATGATCGCATCGCTCGTGATGCTGATCTTTGGTTATCTTGGTGAACTGGGCGCTATGAACTACTGGCTTGCCTTCATCATCGGTATGCTGGGATGGATCTATATTATCTACGAGATCTTCTTCGGCGAAGCCAGTCAGATCAACGCGAGTCAGGGTACCGAAGCGAGTAAAACAGCTTTCAGCGCCTTGCGCATCATCGTGACCTTT LLTVPLQIVEFYLILAAIAVVRAALFWKLMIASLVMLIFGYLGELGAMNYWLAFIIGMLGWIYIIYEIFFGEASQINASQGTEASKTAFSALRIIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTGACTGTTCCGCTACAGATCGTTGAATTTTATCTGATCTTGGCAGCA---------ATC---GCGGTAGTACGCGCA---GCGCTG------------------------------------TTCTGGAAA---CTGATGATCGCATCGCTCGTGATGCTGATCTTTGGTTATCTTGGTGAA---------CTG------------------GGC------GCT---------------------------------ATG------------------------------------------------------------------AACTAC------------------TGGCTTGCC---TTCATCATCGGTATGCTGGGATGGATCTATATTATCTACGAGATC---------------TTC------TTC---GGCGAAGCCAGTCAGATCAACGCGAGT------CAG---GGTACCGAAGCGAGT---AAA---ACA---GCT---TTC---AGC---GCCTTG---CGCATCATCGTGACCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLIFGYLGE---L------G--A-----------M----------------------NY------WLA-FIIGMLGWIYIIYEI-----F--F-GEASQINAS--Q-GTEAS-K-T-A-F-S-AL-RIIVTF-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927186 [unk-Proteo2-Glaciecola] PRGD_OTU006_20f6f7c726ece4d1c718e8c981a94f33 gb|KJ927186| PRGD_OTU006_20f6f7c726ece4d1c718e8c981a94f33, putative proteorhodopsin gene, partial cds. PRGD_OTU006_20f6f7c726ece4d1c718e8c981a94f33, putative proteorhodopsin gene, partial cds. KJ927186 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-35.05, 23.73) TTGTTGACTGTTCCGCTACAGATCGTTGAGTTTTATCTGATCTTGGCGGCCATTGCGGTGGTGCGTGCAGCACTGTTCTGGAAACTGTTGATCGCGTCCTTGGTGATGCTGGTCTTTGGTTACCTCGGTGAGCTGGGTGCTATGAACTACTGGTTAGCATTCTTCATCGGCATGGCCGGTTGGGGATACATCATCTACGAGATTTTCGCAGGTGAAGCCAGTCAGATCAGTGCCAGTCAGGGTACCGAAGCGAGTAAAACCGCTTTTAATGCCTTGCGCATCATTGTGACCTTC LLTVPLQIVEFYLILAAIAVVRAALFWKLLIASLVMLVFGYLGELGAMNYWLAFFIGMAGWGYIIYEIFAGEASQISASQGTEASKTAFNALRIIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTGACTGTTCCGCTACAGATCGTTGAGTTTTATCTGATCTTGGCGGCC---------ATT---GCGGTGGTGCGTGCA---GCACTG------------------------------------TTCTGGAAA---CTGTTGATCGCGTCCTTGGTGATGCTGGTCTTTGGTTACCTCGGTGAG---------CTG------------------GGT------GCT---------------------------------ATG------------------------------------------------------------------AACTAC------------------TGGTTAGCA---TTCTTCATCGGCATGGCCGGTTGGGGATACATCATCTACGAGATT---------------TTC------GCA---GGTGAAGCCAGTCAGATCAGTGCCAGT------CAG---GGTACCGAAGCGAGT---AAA---ACC---GCT---TTT---AAT---GCCTTG---CGCATCATTGTGACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LLIASLVMLVFGYLGE---L------G--A-----------M----------------------NY------WLA-FFIGMAGWGYIIYEI-----F--A-GEASQISAS--Q-GTEAS-K-T-A-F-N-AL-RIIVTF-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927199 [unk-Proteo2-Glaciecola] PRGD_OTU006_4906a999f49ff6d4d95ba6d1fcc9e2f2 gb|KJ927199| PRGD_OTU006_4906a999f49ff6d4d95ba6d1fcc9e2f2, putative proteorhodopsin gene, partial cds. PRGD_OTU006_4906a999f49ff6d4d95ba6d1fcc9e2f2, putative proteorhodopsin gene, partial cds. KJ927199 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTGCTGACCGTTCCATTACAGATTGTTGAGTTCTATCTGATCTTAGCGGCCATCGCGGTGGTTCGCGCAGCGCTGTTCTGGAAGCTCATGATCGCATCATTAGTGATGCTGGTGTTTGGCTACCTAGGTGAGCTTGGTGCAATGAACTACTGGCTCGCGTTCTTAATCGGCATGGCGGGATGGTTGTACATCATCTACGAAATCTTTGCCGGTGAAGCCAGCCAAATAAGCGCCAGCCAAGGTACCGAGGCCAGTAAAACAGCCTTTAATGCCCTGCGCATCATTGTCACCGTC LLTVPLQIVEFYLILAAIAVVRAALFWKLMIASLVMLVFGYLGELGAMNYWLAFLIGMAGWLYIIYEIFAGEASQISASQGTEASKTAFNALRIIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTGACCGTTCCATTACAGATTGTTGAGTTCTATCTGATCTTAGCGGCC---------ATC---GCGGTGGTTCGCGCA---GCGCTG------------------------------------TTCTGGAAG---CTCATGATCGCATCATTAGTGATGCTGGTGTTTGGCTACCTAGGTGAG---------CTT------------------GGT------GCA---------------------------------ATG------------------------------------------------------------------AACTAC------------------TGGCTCGCG---TTCTTAATCGGCATGGCGGGATGGTTGTACATCATCTACGAAATC---------------TTT------GCC---GGTGAAGCCAGCCAAATAAGCGCCAGC------CAA---GGTACCGAGGCCAGT---AAA---ACA---GCC---TTT---AAT---GCCCTG---CGCATCATTGTCACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLVFGYLGE---L------G--A-----------M----------------------NY------WLA-FLIGMAGWLYIIYEI-----F--A-GEASQISAS--Q-GTEAS-K-T-A-F-N-AL-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927213 [unk-Proteo2-Glaciecola] PRGD_OTU006_8972f3695c709cbb24e98b4238516f2f gb|KJ927213| PRGD_OTU006_8972f3695c709cbb24e98b4238516f2f, putative proteorhodopsin gene, partial cds. PRGD_OTU006_8972f3695c709cbb24e98b4238516f2f, putative proteorhodopsin gene, partial cds. KJ927213 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) TTGCTGACCGTTCCATTACAGATTGTTGAGTTCTATCTGATCTTAGCGGCCATCGCGGTGGTTCGCGCAGCGCTGTTTTGGAAGCTGATGATCGCATCATTAGTGATGCTGGTGTTTGGCTATCTAGGTGAGCTTGGTGCAATGAACTACTGGCTCGCGTTCTTAATCGGCATGGCGGGATGGTTGTACATCATCTACGAAATCTTTGCCGGTGAAGCCAGCCAAATAAGCGCCAGCCAAGGTACCGAGGCCAGTAAAACAGCCTTTAATGCCCTGCGCATCATTGTCACCGTC LLTVPLQIVEFYLILAAIAVVRAALFWKLMIASLVMLVFGYLGELGAMNYWLAFLIGMAGWLYIIYEIFAGEASQISASQGTEASKTAFNALRIIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTGACCGTTCCATTACAGATTGTTGAGTTCTATCTGATCTTAGCGGCC---------ATC---GCGGTGGTTCGCGCA---GCGCTG------------------------------------TTTTGGAAG---CTGATGATCGCATCATTAGTGATGCTGGTGTTTGGCTATCTAGGTGAG---------CTT------------------GGT------GCA---------------------------------ATG------------------------------------------------------------------AACTAC------------------TGGCTCGCG---TTCTTAATCGGCATGGCGGGATGGTTGTACATCATCTACGAAATC---------------TTT------GCC---GGTGAAGCCAGCCAAATAAGCGCCAGC------CAA---GGTACCGAGGCCAGT---AAA---ACA---GCC---TTT---AAT---GCCCTG---CGCATCATTGTCACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLVFGYLGE---L------G--A-----------M----------------------NY------WLA-FLIGMAGWLYIIYEI-----F--A-GEASQISAS--Q-GTEAS-K-T-A-F-N-AL-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927198 [unk-Proteo2-Glaciecola] PRGD_OTU006_42f06fe5b1dc5b6bb72e0e081c7943b2 gb|KJ927198| PRGD_OTU006_42f06fe5b1dc5b6bb72e0e081c7943b2, putative proteorhodopsin gene, partial cds. PRGD_OTU006_42f06fe5b1dc5b6bb72e0e081c7943b2, putative proteorhodopsin gene, partial cds. KJ927198 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (72.0542, -130.8781; ; 67.49, -168.12), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) CTGCTGACGGTGCCATTGCAAATCGTTGAGTTCTATCTGATCTTGGCGGCTATTGCTGTAGTTCGCGCAGCGCTATTCTGGAAGTTGTTGATCGCATCGTTAGTGATGCTGATATTCGGCTATCTTGGAGAGCTTGGCGCCATGAACTATTGGCTAGCATTTGCCATTGGGATGGCCGGATGGATATACATTATCTATGAGATCTTCGCTGGTGAAGCCAGTCAGATCAGCGCCAGTCAGGGGACTCAGGCGAGTCAGACAGCGTTCAACGCTTTGCGAATCATTGTGACTGTC LLTVPLQIVEFYLILAAIAVVRAALFWKLLIASLVMLIFGYLGELGAMNYWLAFAIGMAGWIYIIYEIFAGEASQISASQGTQASQTAFNALRIIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTGACGGTGCCATTGCAAATCGTTGAGTTCTATCTGATCTTGGCGGCT---------ATT---GCTGTAGTTCGCGCA---GCGCTA------------------------------------TTCTGGAAG---TTGTTGATCGCATCGTTAGTGATGCTGATATTCGGCTATCTTGGAGAG---------CTT------------------GGC------GCC---------------------------------ATG------------------------------------------------------------------AACTAT------------------TGGCTAGCA---TTTGCCATTGGGATGGCCGGATGGATATACATTATCTATGAGATC---------------TTC------GCT---GGTGAAGCCAGTCAGATCAGCGCCAGT------CAG---GGGACTCAGGCGAGT---CAG---ACA---GCG---TTC---AAC---GCTTTG---CGAATCATTGTGACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LLIASLVMLIFGYLGE---L------G--A-----------M----------------------NY------WLA-FAIGMAGWIYIIYEI-----F--A-GEASQISAS--Q-GTQAS-Q-T-A-F-N-AL-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927191 [unk-Proteo2-Glaciecola] PRGD_OTU006_2cb6f38070f032f7d0748b1a8c6e2cb1 gb|KJ927191| PRGD_OTU006_2cb6f38070f032f7d0748b1a8c6e2cb1, putative proteorhodopsin gene, partial cds. PRGD_OTU006_2cb6f38070f032f7d0748b1a8c6e2cb1, putative proteorhodopsin gene, partial cds. KJ927191 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.935 18.508 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTGTTAACAGTTCCGCTGCAGATTATCGAGTTTTACTTGATTCTTGCGGCCATCGCGGTAGTTCGCGCGGCTCTATTCTGGAAGCTAATGATCGCGTCCATCGTGATGCTGGTCTTCGGTTTCTTGGGCGAGCTTGGCGCGATGAGCTACTGGCCTGCGTTCGCTATCGGAATGGCTGGCTGGCTTTACATTATCTACGAGATCTTCGCAGGTGAAGCAAGCCAGATCAGCGCAGCGAGCGGTACGCCAGCGAGCCAATACGCGTTCAACGCATTGCGCTTGATTGTGACCGTA LLTVPLQIIEFYLILAAIAVVRAALFWKLMIASIVMLVFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAASGTPASQYAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACAGTTCCGCTGCAGATTATCGAGTTTTACTTGATTCTTGCGGCC---------ATC---GCGGTAGTTCGCGCG---GCTCTA------------------------------------TTCTGGAAG---CTAATGATCGCGTCCATCGTGATGCTGGTCTTCGGTTTCTTGGGCGAG---------CTT------------------GGC------GCG---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCG---TTCGCTATCGGAATGGCTGGCTGGCTTTACATTATCTACGAGATC---------------TTC------GCA---GGTGAAGCAAGCCAGATCAGCGCAGCG------AGC---GGTACGCCAGCGAGC---CAA---TAC---GCG---TTC---AAC---GCATTG---CGCTTGATTGTGACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASIVMLVFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--S-GTPAS-Q-Y-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927244 [unk-Proteo2-Glaciecola] PRGD_OTU006_fd9d0cd4d3bc02c3691184e873a2186f gb|KJ927244| PRGD_OTU006_fd9d0cd4d3bc02c3691184e873a2186f, putative proteorhodopsin gene, partial cds. PRGD_OTU006_fd9d0cd4d3bc02c3691184e873a2186f, putative proteorhodopsin gene, partial cds. KJ927244 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTGTTAACGGTTCCGCTTCAGATTATCGAGTTTTACTTGATTCTTGCGGCCATCGCGGTAGTTCGCGCGGCTCTATTCTGGAAGCTAATGATCGCATCCATCGTGATGCTGGTCTTCGGTTTCTTGGGTGAGCTTGGCGCGATGAGCTACTGGCCTGCATTCGCTATCGGAATGGCTGGCTGGCTTTACATTATCTACGAGATCTTCGCGGGTGAAGCAAGCCAGATCAGCGCAGCGAGTGGTACGCCTGCGAGCCAATACGCGTTCAACGCGTTGCGCTTGATTGTGACCGTA LLTVPLQIIEFYLILAAIAVVRAALFWKLMIASIVMLVFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAASGTPASQYAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACGGTTCCGCTTCAGATTATCGAGTTTTACTTGATTCTTGCGGCC---------ATC---GCGGTAGTTCGCGCG---GCTCTA------------------------------------TTCTGGAAG---CTAATGATCGCATCCATCGTGATGCTGGTCTTCGGTTTCTTGGGTGAG---------CTT------------------GGC------GCG---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCA---TTCGCTATCGGAATGGCTGGCTGGCTTTACATTATCTACGAGATC---------------TTC------GCG---GGTGAAGCAAGCCAGATCAGCGCAGCG------AGT---GGTACGCCTGCGAGC---CAA---TAC---GCG---TTC---AAC---GCGTTG---CGCTTGATTGTGACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASIVMLVFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--S-GTPAS-Q-Y-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927206 [unk-Proteo2-Glaciecola] PRGD_OTU006_7495c534dc625f7d7c9fcefc8104a70f gb|KJ927206| PRGD_OTU006_7495c534dc625f7d7c9fcefc8104a70f, putative proteorhodopsin gene, partial cds. PRGD_OTU006_7495c534dc625f7d7c9fcefc8104a70f, putative proteorhodopsin gene, partial cds. KJ927206 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) CTATTAACGGTTCCGCTGCAGATTATCGAGTTTTACTTGATTCTTGCGGCCATCGCGGTAGTTCGCGCGGCTCTATTCTGGAAGCTTATGATTGCATCCATTGTGATGTTGGTCTTCGGTTTCTTGGGCGAGCTTGGCGCGATGAGCTACTGGCCAGCGTTCGCTATCGGAATGGCTGGCTGGCTTTACATCATCTACGAGATCTTCGCGGGTGAAGCAAGCCAGATCAGCGCAGCGAGTGGTACGCCAGCGAGCCAATACGCGTTCAACGCATTGCGCTTGATTGTGACCGTA LLTVPLQIIEFYLILAAIAVVRAALFWKLMIASIVMLVFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAASGTPASQYAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACGGTTCCGCTGCAGATTATCGAGTTTTACTTGATTCTTGCGGCC---------ATC---GCGGTAGTTCGCGCG---GCTCTA------------------------------------TTCTGGAAG---CTTATGATTGCATCCATTGTGATGTTGGTCTTCGGTTTCTTGGGCGAG---------CTT------------------GGC------GCG---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCAGCG---TTCGCTATCGGAATGGCTGGCTGGCTTTACATCATCTACGAGATC---------------TTC------GCG---GGTGAAGCAAGCCAGATCAGCGCAGCG------AGT---GGTACGCCAGCGAGC---CAA---TAC---GCG---TTC---AAC---GCATTG---CGCTTGATTGTGACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASIVMLVFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--S-GTPAS-Q-Y-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927210 [unk-Proteo2-Glaciecola] PRGD_OTU006_828933e59dfdc8c9e44e219e0c0050d7 gb|KJ927210| PRGD_OTU006_828933e59dfdc8c9e44e219e0c0050d7, putative proteorhodopsin gene, partial cds. PRGD_OTU006_828933e59dfdc8c9e44e219e0c0050d7, putative proteorhodopsin gene, partial cds. KJ927210 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) CTATTAACGGTTCCGCTGCAGATTATCGAGTTTTACTTGATTCTTGCGGCCATCGCGGTAGTTCGCGCGGCTCTATTCTGGAAGCTTATGATCGCATCCATTGTGATGTTGGTCTTCGGTTTCTTGGGCGAGCTTGGCGCGATGAGCTACTGGCCTGCGTTCGCTATCGGAATGGCTGGCTGGCTTTACATCATCTACGAGATCTTCGCGGGTGAAGCAAGCCAGATCAGCGCAGCCAGTGGTACGCCAGCGAGCCAATACGCGTTCAACGCATTGCGCTTGATTGTGACTGTA LLTVPLQIIEFYLILAAIAVVRAALFWKLMIASIVMLVFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAASGTPASQYAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACGGTTCCGCTGCAGATTATCGAGTTTTACTTGATTCTTGCGGCC---------ATC---GCGGTAGTTCGCGCG---GCTCTA------------------------------------TTCTGGAAG---CTTATGATCGCATCCATTGTGATGTTGGTCTTCGGTTTCTTGGGCGAG---------CTT------------------GGC------GCG---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCG---TTCGCTATCGGAATGGCTGGCTGGCTTTACATCATCTACGAGATC---------------TTC------GCG---GGTGAAGCAAGCCAGATCAGCGCAGCC------AGT---GGTACGCCAGCGAGC---CAA---TAC---GCG---TTC---AAC---GCATTG---CGCTTGATTGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASIVMLVFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--S-GTPAS-Q-Y-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927188 [unk-Proteo2-Glaciecola] PRGD_OTU006_2740b50cf9505fca6b871ee06503a6df gb|KJ927188| PRGD_OTU006_2740b50cf9505fca6b871ee06503a6df, putative proteorhodopsin gene, partial cds. PRGD_OTU006_2740b50cf9505fca6b871ee06503a6df, putative proteorhodopsin gene, partial cds. KJ927188 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGTTAACAGTTCCGCTGCAGATTATCGAGTTTTACTTGATTCTTGCGGCCATCGCGGTAGTTCGCGCGGCTCTATTCTGGAAGCTCATGATCGCCTCCATCGTGATGTTGGTCTTCGGTTTCTTGGGCGAGCTTGGCGCGATGAGCTACTGGCCTGCGTTCGCTATCGGAATGGCTGGCTGGCTTTACATCATCTATGAGATCTTCGCGGGTGAAGCAAGCCAAATCAGCGCGGCGAGTGGTACGCCAGCGAGCCAATACGCGTTTAACGCATTGCGCTTGATTGTGACCGTA LLTVPLQIIEFYLILAAIAVVRAALFWKLMIASIVMLVFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAASGTPASQYAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACAGTTCCGCTGCAGATTATCGAGTTTTACTTGATTCTTGCGGCC---------ATC---GCGGTAGTTCGCGCG---GCTCTA------------------------------------TTCTGGAAG---CTCATGATCGCCTCCATCGTGATGTTGGTCTTCGGTTTCTTGGGCGAG---------CTT------------------GGC------GCG---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCG---TTCGCTATCGGAATGGCTGGCTGGCTTTACATCATCTATGAGATC---------------TTC------GCG---GGTGAAGCAAGCCAAATCAGCGCGGCG------AGT---GGTACGCCAGCGAGC---CAA---TAC---GCG---TTT---AAC---GCATTG---CGCTTGATTGTGACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASIVMLVFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--S-GTPAS-Q-Y-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927222 [unk-Proteo2-Glaciecola] PRGD_OTU006_a2d0be9981131d8ea835813c647f3c2d gb|KJ927222| PRGD_OTU006_a2d0be9981131d8ea835813c647f3c2d, putative proteorhodopsin gene, partial cds. PRGD_OTU006_a2d0be9981131d8ea835813c647f3c2d, putative proteorhodopsin gene, partial cds. KJ927222 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTATTAACAGTTCCGCTGCAGATTATCGAGTTTTACTTGATTCTTGCGGCCATCGCGGTAGTTCGCGCGGCTCTATTCTGGAAGCTCATGATCGCCTCCATCGTGATGTTGGTCTTCGGTTTCTTGGGCGAGCTTGGCGCGATGAGCTACTGGCCTGCGTTCGCTATCGGAATGGCTGGCTGGCTTTACATCATCTACGAGATCTTCGCGGGTGAAGCAAGCCAAATCAGCGCGGCGAGTGGTACGCCAGCGAGCCAATACGCGTTTAACGCATTGCGCTTGATTGTGACCGTA LLTVPLQIIEFYLILAAIAVVRAALFWKLMIASIVMLVFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAASGTPASQYAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACAGTTCCGCTGCAGATTATCGAGTTTTACTTGATTCTTGCGGCC---------ATC---GCGGTAGTTCGCGCG---GCTCTA------------------------------------TTCTGGAAG---CTCATGATCGCCTCCATCGTGATGTTGGTCTTCGGTTTCTTGGGCGAG---------CTT------------------GGC------GCG---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCG---TTCGCTATCGGAATGGCTGGCTGGCTTTACATCATCTACGAGATC---------------TTC------GCG---GGTGAAGCAAGCCAAATCAGCGCGGCG------AGT---GGTACGCCAGCGAGC---CAA---TAC---GCG---TTT---AAC---GCATTG---CGCTTGATTGTGACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASIVMLVFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--S-GTPAS-Q-Y-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927193 [unk-Proteo2-Glaciecola] PRGD_OTU006_2eccee0f4f6a1ad81e6705d99d576dff gb|KJ927193| PRGD_OTU006_2eccee0f4f6a1ad81e6705d99d576dff, putative proteorhodopsin gene, partial cds. PRGD_OTU006_2eccee0f4f6a1ad81e6705d99d576dff, putative proteorhodopsin gene, partial cds. KJ927193 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTATTAACGGTTCCGCTGCAGATTATCGAGTTTTACTTGATTCTTGCGGCTATCGCGGTAGTTCGCGCGGCTCTATTCTGGAAGCTTATGATCGCCTCCATCGTGATGTTGGTCTTCGGTTTCTTGGGCGAGCTTGGCGCGATGAGCTACTGGCCTGCGTTCGCTATCGGAATGGCTGGCTGGCTTTACATTATCTACGAGATCTTCGCGGGTGAAGCAAGCCAGATCAGCGCGGCGAGTGGTACGCCAGCGAGCCAATACGCGTTCAACGCATTGCGCTTGATTGTGACAGTA LLTVPLQIIEFYLILAAIAVVRAALFWKLMIASIVMLVFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAASGTPASQYAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACGGTTCCGCTGCAGATTATCGAGTTTTACTTGATTCTTGCGGCT---------ATC---GCGGTAGTTCGCGCG---GCTCTA------------------------------------TTCTGGAAG---CTTATGATCGCCTCCATCGTGATGTTGGTCTTCGGTTTCTTGGGCGAG---------CTT------------------GGC------GCG---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCG---TTCGCTATCGGAATGGCTGGCTGGCTTTACATTATCTACGAGATC---------------TTC------GCG---GGTGAAGCAAGCCAGATCAGCGCGGCG------AGT---GGTACGCCAGCGAGC---CAA---TAC---GCG---TTC---AAC---GCATTG---CGCTTGATTGTGACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASIVMLVFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--S-GTPAS-Q-Y-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927229 [unk-Proteo2-Glaciecola] PRGD_OTU006_b6fae6022eba231e71d25a61c62d5129 gb|KJ927229| PRGD_OTU006_b6fae6022eba231e71d25a61c62d5129, putative proteorhodopsin gene, partial cds. PRGD_OTU006_b6fae6022eba231e71d25a61c62d5129, putative proteorhodopsin gene, partial cds. KJ927229 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTATTAACGGTTCCGCTGCAGATTATCGAGTTTTACTTGATTCTTGCGGCCATCGCGGTAGTTCGCGCGGCTCTATTCTGGAAGCTTATGATCGCCTCCATCGTGATGTTGGTCTTCGGTTTCTTAGGCGAGCTTGGCGCGATGAGCTACTGGCCTGCGTTCGCTATCGGAATGGCTGGCTGGCTTTACATCATCTACGAGATCTTCGCGGGTGAAGCAAGCCAGATTAGCGCGGCGAGTGGTACGCCAGCGAGCCAATACGCGTTCAACGCATTGCGCTTGATTGTTACCGTA LLTVPLQIIEFYLILAAIAVVRAALFWKLMIASIVMLVFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAASGTPASQYAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACGGTTCCGCTGCAGATTATCGAGTTTTACTTGATTCTTGCGGCC---------ATC---GCGGTAGTTCGCGCG---GCTCTA------------------------------------TTCTGGAAG---CTTATGATCGCCTCCATCGTGATGTTGGTCTTCGGTTTCTTAGGCGAG---------CTT------------------GGC------GCG---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCG---TTCGCTATCGGAATGGCTGGCTGGCTTTACATCATCTACGAGATC---------------TTC------GCG---GGTGAAGCAAGCCAGATTAGCGCGGCG------AGT---GGTACGCCAGCGAGC---CAA---TAC---GCG---TTC---AAC---GCATTG---CGCTTGATTGTTACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASIVMLVFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--S-GTPAS-Q-Y-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927180 [unk-Proteo2-Glaciecola] PRGD_OTU006_06e5ad0e0d8637166ab27fda85cb39f9 gb|KJ927180| PRGD_OTU006_06e5ad0e0d8637166ab27fda85cb39f9, putative proteorhodopsin gene, partial cds. PRGD_OTU006_06e5ad0e0d8637166ab27fda85cb39f9, putative proteorhodopsin gene, partial cds. KJ927180 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTATTAACGGTTCCGCTGCAGATTATCGAGTTTTACTTGATTCTTGCGGCCATCGCGGTAGTTCGCGCGGCTCTATTCTGGAAGCTTATGATCGCATCCATCGTGATGTTGGTCTTCGGTTTCTTGGGCGAGCTTGGCGCGATGAGCTACTGGCCTGCGTTCGCTATTGGAATGGCTGGCTGGCTTTACATCATCTACGAGATCTTCGCGGGTGAAGCAAGCCAAATCAGCGCAGCGAGTGGTACGCCGGCGAGCCAATACGCGTTCAACGCATTGCGCTTGATTGTGACCGTA LLTVPLQIIEFYLILAAIAVVRAALFWKLMIASIVMLVFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAASGTPASQYAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACGGTTCCGCTGCAGATTATCGAGTTTTACTTGATTCTTGCGGCC---------ATC---GCGGTAGTTCGCGCG---GCTCTA------------------------------------TTCTGGAAG---CTTATGATCGCATCCATCGTGATGTTGGTCTTCGGTTTCTTGGGCGAG---------CTT------------------GGC------GCG---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCG---TTCGCTATTGGAATGGCTGGCTGGCTTTACATCATCTACGAGATC---------------TTC------GCG---GGTGAAGCAAGCCAAATCAGCGCAGCG------AGT---GGTACGCCGGCGAGC---CAA---TAC---GCG---TTC---AAC---GCATTG---CGCTTGATTGTGACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASIVMLVFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--S-GTPAS-Q-Y-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927178 [unk-Proteo2-Glaciecola] PRGD_OTU006_040c3ef4936944fa9cb25834d11e06aa gb|KJ927178| PRGD_OTU006_040c3ef4936944fa9cb25834d11e06aa, putative proteorhodopsin gene, partial cds. PRGD_OTU006_040c3ef4936944fa9cb25834d11e06aa, putative proteorhodopsin gene, partial cds. KJ927178 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTATTAACGGTTCCGCTGCAGATTATCGAGTTTTACTTGATTCTTGCGGCCATCGCGGTAGTTCGCGCGGCTCTATTCTGGAAGCTTATGATCGCATCCATCGTGATGTTGGTCTTCGGTTTCTTGGGCGAGCTTGGCGCGATGAGCTACTGGCCTGCGTTTGCTATCGGAATGGCTGGCTGGCTTTACATCATCTACGAGATCTTCGCGGGTGAAGCGAGCCAGATCAGCGCAGAGAGTGGTACGCCAGCTAGCCAATACGCGTTCAACGCATTGCGCTTGATTGTGACCGTA LLTVPLQIIEFYLILAAIAVVRAALFWKLMIASIVMLVFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAESGTPASQYAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACGGTTCCGCTGCAGATTATCGAGTTTTACTTGATTCTTGCGGCC---------ATC---GCGGTAGTTCGCGCG---GCTCTA------------------------------------TTCTGGAAG---CTTATGATCGCATCCATCGTGATGTTGGTCTTCGGTTTCTTGGGCGAG---------CTT------------------GGC------GCG---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCG---TTTGCTATCGGAATGGCTGGCTGGCTTTACATCATCTACGAGATC---------------TTC------GCG---GGTGAAGCGAGCCAGATCAGCGCAGAG------AGT---GGTACGCCAGCTAGC---CAA---TAC---GCG---TTC---AAC---GCATTG---CGCTTGATTGTGACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASIVMLVFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAE--S-GTPAS-Q-Y-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927217 [unk-Proteo2-Glaciecola] PRGD_OTU006_970650419f5582528e08875604fbc250 gb|KJ927217| PRGD_OTU006_970650419f5582528e08875604fbc250, putative proteorhodopsin gene, partial cds. PRGD_OTU006_970650419f5582528e08875604fbc250, putative proteorhodopsin gene, partial cds. KJ927217 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Mediterranean Sea (33.762, 29.175), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTATTAACGGTTCCGCTGCAGATTATCGAGTTTTACTTGATTCTTGCGGCCATCGCGGTAGTTCGCGCGGCTCTATTCTGGAAGCTTATGATCGCATCCATCGTGATGTTGGTCTTCGGTTTCTTGGGCGAGCTTGGCGCGATGAGCTACTGGCCTGCGTTCGCTATCGGAATGGCTGGCTGGCTTTACATCATCTACGAGATCTTCGCGGGTGAAGCAAGCCAGATCAGCGCTGCGAGTGGTACGCCAGCGAGCCAATACGCGTTCAACGCATTGCGCTTGATTGTGACCGTA LLTVPLQIIEFYLILAAIAVVRAALFWKLMIASIVMLVFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAASGTPASQYAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACGGTTCCGCTGCAGATTATCGAGTTTTACTTGATTCTTGCGGCC---------ATC---GCGGTAGTTCGCGCG---GCTCTA------------------------------------TTCTGGAAG---CTTATGATCGCATCCATCGTGATGTTGGTCTTCGGTTTCTTGGGCGAG---------CTT------------------GGC------GCG---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCG---TTCGCTATCGGAATGGCTGGCTGGCTTTACATCATCTACGAGATC---------------TTC------GCG---GGTGAAGCAAGCCAGATCAGCGCTGCG------AGT---GGTACGCCAGCGAGC---CAA---TAC---GCG---TTC---AAC---GCATTG---CGCTTGATTGTGACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASIVMLVFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--S-GTPAS-Q-Y-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927195 [unk-Proteo2-Glaciecola] PRGD_OTU006_3dab54fabc66a4d2650e464d4c2d576c gb|KJ927195| PRGD_OTU006_3dab54fabc66a4d2650e464d4c2d576c, putative proteorhodopsin gene, partial cds. PRGD_OTU006_3dab54fabc66a4d2650e464d4c2d576c, putative proteorhodopsin gene, partial cds. KJ927195 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683) CTACTAACGGTTCCGCTGCAGATTATTGAGTTTTACTTGATTCTTGCGGCCATCGCAGTAGTTCGCGCGGCTCTGTTTTGGAAGCTCATGATCGCATCCATCGTGATGTTGGTCTTCGGTTTCTTGGGCGAGCTGGGCGCAATGAGCTACTGGCCTGCGTTCGCTATCGGATTGGCTGGGTGGTTTTACATCATCTACGAGATCTTCATTGGTGAGGCGAGTCAAATCAGCGCCGCCAGCGGTACTGCTGCGAGCCAGTACGCGTTCAACGCATTGCGGTTGATTGTGACAGTA LLTVPLQIIEFYLILAAIAVVRAALFWKLMIASIVMLVFGFLGELGAMSYWPAFAIGLAGWFYIIYEIFIGEASQISAASGTAASQYAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTAACGGTTCCGCTGCAGATTATTGAGTTTTACTTGATTCTTGCGGCC---------ATC---GCAGTAGTTCGCGCG---GCTCTG------------------------------------TTTTGGAAG---CTCATGATCGCATCCATCGTGATGTTGGTCTTCGGTTTCTTGGGCGAG---------CTG------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCG---TTCGCTATCGGATTGGCTGGGTGGTTTTACATCATCTACGAGATC---------------TTC------ATT---GGTGAGGCGAGTCAAATCAGCGCCGCC------AGC---GGTACTGCTGCGAGC---CAG---TAC---GCG---TTC---AAC---GCATTG---CGGTTGATTGTGACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASIVMLVFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGLAGWFYIIYEI-----F--I-GEASQISAA--S-GTAAS-Q-Y-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927203 [unk-Proteo2-Glaciecola] PRGD_OTU006_5de732a8fee386c83e0dd65653c88014 gb|KJ927203| PRGD_OTU006_5de732a8fee386c83e0dd65653c88014, putative proteorhodopsin gene, partial cds. PRGD_OTU006_5de732a8fee386c83e0dd65653c88014, putative proteorhodopsin gene, partial cds. KJ927203 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) CTACTAACGGTTCCGCTGCAGATTATTGAGTTTTACTTGATTCTTGCGGCCATAGCAGTAGTTCGCGCGGCTCTATTCTGGAAGCTCATGATCGCATCCATCGTGATGTTGGTCTTCGGTTTCTTGGGCGAGCTGGGCGCAATGAGCTACTGGCCTGCGTTCGCTATCGGATTGGCTGGGTGGTTTTACATCATCTACGAGATCTTCGTTGGTGAGGCGAGTCAAATCAGCGCCGCCAGCGGTACTGCTGCGAGCCAGTACGCGTTCAACGCATTGCGGTTGATTGTGACAGTA LLTVPLQIIEFYLILAAIAVVRAALFWKLMIASIVMLVFGFLGELGAMSYWPAFAIGLAGWFYIIYEIFVGEASQISAASGTAASQYAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTAACGGTTCCGCTGCAGATTATTGAGTTTTACTTGATTCTTGCGGCC---------ATA---GCAGTAGTTCGCGCG---GCTCTA------------------------------------TTCTGGAAG---CTCATGATCGCATCCATCGTGATGTTGGTCTTCGGTTTCTTGGGCGAG---------CTG------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCG---TTCGCTATCGGATTGGCTGGGTGGTTTTACATCATCTACGAGATC---------------TTC------GTT---GGTGAGGCGAGTCAAATCAGCGCCGCC------AGC---GGTACTGCTGCGAGC---CAG---TAC---GCG---TTC---AAC---GCATTG---CGGTTGATTGTGACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASIVMLVFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGLAGWFYIIYEI-----F--V-GEASQISAA--S-GTAAS-Q-Y-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927241 [unk-Proteo2-Glaciecola] PRGD_OTU006_e23196f1f1508e6d6ddfddc1e6f707f2 gb|KJ927241| PRGD_OTU006_e23196f1f1508e6d6ddfddc1e6f707f2, putative proteorhodopsin gene, partial cds. PRGD_OTU006_e23196f1f1508e6d6ddfddc1e6f707f2, putative proteorhodopsin gene, partial cds. KJ927241 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTATTAACAGTTCCGCTGCAGATTATTGAGTTTTACTTGATTCTTGCCGCCATCGCGGTAGTTCGCGCGGCTCTATTCTGGAAGCTTATGATCGCATCCATCGTGATGTTGGTCTTCGGTTTCTTGGGCGAGCTTGGCGCAATGAGCTACTGGCCCGCATTCGCTATCGGAATGGCTGGCTGGCTATACATCATCTACGAGATCTTCGCAGGCGAAGCTAGTCAGATCAGTGCGGCCAATGGTACGGCCGCGAGCCAGTACGCATTCAACGCATTGCGCTTGATTGTGACCGTA LLTVPLQIIEFYLILAAIAVVRAALFWKLMIASIVMLVFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAANGTAASQYAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACAGTTCCGCTGCAGATTATTGAGTTTTACTTGATTCTTGCCGCC---------ATC---GCGGTAGTTCGCGCG---GCTCTA------------------------------------TTCTGGAAG---CTTATGATCGCATCCATCGTGATGTTGGTCTTCGGTTTCTTGGGCGAG---------CTT------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCCGCA---TTCGCTATCGGAATGGCTGGCTGGCTATACATCATCTACGAGATC---------------TTC------GCA---GGCGAAGCTAGTCAGATCAGTGCGGCC------AAT---GGTACGGCCGCGAGC---CAG---TAC---GCA---TTC---AAC---GCATTG---CGCTTGATTGTGACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASIVMLVFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--N-GTAAS-Q-Y-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927200 [unk-Proteo2-Glaciecola] PRGD_OTU006_4d9cfd33ae9617b0cdc3b70d6d02dc63 gb|KJ927200| PRGD_OTU006_4d9cfd33ae9617b0cdc3b70d6d02dc63, putative proteorhodopsin gene, partial cds. PRGD_OTU006_4d9cfd33ae9617b0cdc3b70d6d02dc63, putative proteorhodopsin gene, partial cds. KJ927200 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTATTAACAGTTCCGCTGCAGATTATTGAGTTTTACTTGATTCTTGCCGCCATCGCGGTAGTTCGCGCGGCTCTATTCTGGAAGCTTATGATCGCATCCATCGTGATGTTGGTTTTCGGTTTCTTGGGCGAGCTCGGCGCAATGAGCTACTGGCCTGCGTTCGCTATCGGAATGGCTGGCTGGCTATACATCATCTACGAGATTTTCGCAGGCGAGGCAAGTCAAATCAGTGCTGCCAATGGTACGGCCGCAAGTCAAACCGCGTTCAACGCATTGCGGTTAATTGTAACTGTA LLTVPLQIIEFYLILAAIAVVRAALFWKLMIASIVMLVFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAANGTAASQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACAGTTCCGCTGCAGATTATTGAGTTTTACTTGATTCTTGCCGCC---------ATC---GCGGTAGTTCGCGCG---GCTCTA------------------------------------TTCTGGAAG---CTTATGATCGCATCCATCGTGATGTTGGTTTTCGGTTTCTTGGGCGAG---------CTC------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCG---TTCGCTATCGGAATGGCTGGCTGGCTATACATCATCTACGAGATT---------------TTC------GCA---GGCGAGGCAAGTCAAATCAGTGCTGCC------AAT---GGTACGGCCGCAAGT---CAA---ACC---GCG---TTC---AAC---GCATTG---CGGTTAATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASIVMLVFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--N-GTAAS-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927177 [unk-Proteo2-Glaciecola] PRGD_OTU006_03df3a41d86733a2dd04d377c84d50b1 gb|KJ927177| PRGD_OTU006_03df3a41d86733a2dd04d377c84d50b1, putative proteorhodopsin gene, partial cds. PRGD_OTU006_03df3a41d86733a2dd04d377c84d50b1, putative proteorhodopsin gene, partial cds. KJ927177 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTGTTAACGGTTCCGCTGCAAATTATTGAGTTTTACTTAATTCTTGCGGCTATAGCTGTGGTCCGCGCGGCTCTATTCTGGAAGCTTATGATCGCATCCCTCGTGATGCTGATCTTTGGTTTCTTGGGAGAGCTTGGCGCAATGAGCTACTGGCCTGCATTCGCTATCGGAATGGCTGGCTGGCTTTACATCATCTACGAGATCTTCGCAGGCGAAGCAAGTCAGATCAGTGCTGCCAATGGTACGGCCGCAAGTCAAACCGCGTTCAACGCCTTGCGCTTGATTGTAACCGTG LLTVPLQIIEFYLILAAIAVVRAALFWKLMIASLVMLIFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAANGTAASQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACGGTTCCGCTGCAAATTATTGAGTTTTACTTAATTCTTGCGGCT---------ATA---GCTGTGGTCCGCGCG---GCTCTA------------------------------------TTCTGGAAG---CTTATGATCGCATCCCTCGTGATGCTGATCTTTGGTTTCTTGGGAGAG---------CTT------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCA---TTCGCTATCGGAATGGCTGGCTGGCTTTACATCATCTACGAGATC---------------TTC------GCA---GGCGAAGCAAGTCAGATCAGTGCTGCC------AAT---GGTACGGCCGCAAGT---CAA---ACC---GCG---TTC---AAC---GCCTTG---CGCTTGATTGTAACCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLIFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--N-GTAAS-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927237 [unk-Proteo2-Glaciecola] PRGD_OTU006_d350700338b33b6312a894116172ec6c gb|KJ927237| PRGD_OTU006_d350700338b33b6312a894116172ec6c, putative proteorhodopsin gene, partial cds. PRGD_OTU006_d350700338b33b6312a894116172ec6c, putative proteorhodopsin gene, partial cds. KJ927237 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGTTAACGGTTCCGCTGCAAATTATTGAGTTTTACTTGATTCTTGCGGCTATAGCTGTGGTCCGCGCGGCCCTATTCTGGAAGCTCATGATCGCATCCCTCGTGATGCTGATCTTTGGTTTCTTGGGAGAGCTTGGCGCAATGAGCTACTGGCCTGCATTCGCTATCGGAATGGCTGGCTGGCTTTACATCATCTACGAGATCTTCGCAGGCGAAGCAAGTCAGATCAGTGCTGCCAATGGTACGGCCGCAAGTCAAACCGCGTTCAACGCCTTGCGCTTGATTGTAACCGTG LLTVPLQIIEFYLILAAIAVVRAALFWKLMIASLVMLIFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAANGTAASQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACGGTTCCGCTGCAAATTATTGAGTTTTACTTGATTCTTGCGGCT---------ATA---GCTGTGGTCCGCGCG---GCCCTA------------------------------------TTCTGGAAG---CTCATGATCGCATCCCTCGTGATGCTGATCTTTGGTTTCTTGGGAGAG---------CTT------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCA---TTCGCTATCGGAATGGCTGGCTGGCTTTACATCATCTACGAGATC---------------TTC------GCA---GGCGAAGCAAGTCAGATCAGTGCTGCC------AAT---GGTACGGCCGCAAGT---CAA---ACC---GCG---TTC---AAC---GCCTTG---CGCTTGATTGTAACCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLIFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--N-GTAAS-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927216 [unk-Proteo2-Glaciecola] PRGD_OTU006_96ee29d2830e229cfc8b985dc930ca47 gb|KJ927216| PRGD_OTU006_96ee29d2830e229cfc8b985dc930ca47, putative proteorhodopsin gene, partial cds. PRGD_OTU006_96ee29d2830e229cfc8b985dc930ca47, putative proteorhodopsin gene, partial cds. KJ927216 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), Indian Ocean (-23.5956, 69.0419) CTGTTAACGGTTCCGCTGCAAATTATTGAGTTTTACTTGATTCTTGCGGCTATAGCTGTAGTCCGCGCGGCTCTATTCTGGAAGCTTATGATCGCATCCCTCGTGATGCTGATCTTTGGTTTCTTGGGTGAGCTTGGCGCAATGAGCTACTGGCCTGCGTTCGCTATCGGGATGGCTGGCTGGCTTTACATCATCTACGAGATCTTCGCAGGCGAAGCAAGTCAGATCAGTGCAGCCAATGGTACGGCCGCAAGTCAAACCGCGTTCAACGCATTGCGCTTGATTGTAACCGTA LLTVPLQIIEFYLILAAIAVVRAALFWKLMIASLVMLIFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAANGTAASQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACGGTTCCGCTGCAAATTATTGAGTTTTACTTGATTCTTGCGGCT---------ATA---GCTGTAGTCCGCGCG---GCTCTA------------------------------------TTCTGGAAG---CTTATGATCGCATCCCTCGTGATGCTGATCTTTGGTTTCTTGGGTGAG---------CTT------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCG---TTCGCTATCGGGATGGCTGGCTGGCTTTACATCATCTACGAGATC---------------TTC------GCA---GGCGAAGCAAGTCAGATCAGTGCAGCC------AAT---GGTACGGCCGCAAGT---CAA---ACC---GCG---TTC---AAC---GCATTG---CGCTTGATTGTAACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLIFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--N-GTAAS-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927214 [unk-Proteo2-Glaciecola] PRGD_OTU006_9330c8ecc05b60084ee0e67e110da843 gb|KJ927214| PRGD_OTU006_9330c8ecc05b60084ee0e67e110da843, putative proteorhodopsin gene, partial cds. PRGD_OTU006_9330c8ecc05b60084ee0e67e110da843, putative proteorhodopsin gene, partial cds. KJ927214 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175; 33.935, 18.508) CTGTTAACGGTTCCACTGCAAATTATTGAGTTTTACTTGATTCTTGCGGCTATAGCTGTAGTCCGCGCGGCTCTTTTCTGGAAGCTTATGATCGCGTCCCTCGTGATGCTGATCTTTGGTTTCTTGGGTGAGCTTGGCGCAATGAGCTACTGGCCTGCGTTCGCTATCGGAATGGCTGGCTGGCTTTACATCATCTACGAGATCTTCGCAGGCGAAGCAAGTCAGATCAGTGCTGCCAATGGTACGGCCGCAAGTCAAACCGCGTTCAACGCATTGCGCTTGATTGTAACCGTA LLTVPLQIIEFYLILAAIAVVRAALFWKLMIASLVMLIFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAANGTAASQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACGGTTCCACTGCAAATTATTGAGTTTTACTTGATTCTTGCGGCT---------ATA---GCTGTAGTCCGCGCG---GCTCTT------------------------------------TTCTGGAAG---CTTATGATCGCGTCCCTCGTGATGCTGATCTTTGGTTTCTTGGGTGAG---------CTT------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCG---TTCGCTATCGGAATGGCTGGCTGGCTTTACATCATCTACGAGATC---------------TTC------GCA---GGCGAAGCAAGTCAGATCAGTGCTGCC------AAT---GGTACGGCCGCAAGT---CAA---ACC---GCG---TTC---AAC---GCATTG---CGCTTGATTGTAACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLIFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--N-GTAAS-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927175 [unk-Proteo2-Glaciecola] PRGD_OTU006_otuREP_054cb74b18435827080ffc38f91c2073 gb|KJ927175| PRGD_OTU006_otuREP_054cb74b18435827080ffc38f91c2073, putative proteorhodopsin gene, partial cds. PRGD_OTU006_otuREP_054cb74b18435827080ffc38f91c2073, putative proteorhodopsin gene, partial cds. KJ927175 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTGCTAACGGTACCGCTGCAAATTATCGAGTTCTATCTGATTCTTGCGGCTATCGCTGTAGTTCGCGCGGCTTTGTTCTGGAAGCTCATGATCGCCTCCATCGTGATGCTGGTCTTCGGCTTCTTGGGCGAACTTGGCGCGATGAGCTACTGGCCTGCGTTCGCAATCGGGATGGCTGGCTGGTTGTACATCATCTACGAGATCTTCGCAGGTGAAGCAAGCCAGATCAGTGCTGCCAATGGTACGGCTGCAAGCCAAGCTGCGTTTAACGCATTGCGCTTGATTGTGACCGTA LLTVPLQIIEFYLILAAIAVVRAALFWKLMIASIVMLVFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAANGTAASQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTAACGGTACCGCTGCAAATTATCGAGTTCTATCTGATTCTTGCGGCT---------ATC---GCTGTAGTTCGCGCG---GCTTTG------------------------------------TTCTGGAAG---CTCATGATCGCCTCCATCGTGATGCTGGTCTTCGGCTTCTTGGGCGAA---------CTT------------------GGC------GCG---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCG---TTCGCAATCGGGATGGCTGGCTGGTTGTACATCATCTACGAGATC---------------TTC------GCA---GGTGAAGCAAGCCAGATCAGTGCTGCC------AAT---GGTACGGCTGCAAGC---CAA---GCT---GCG---TTT---AAC---GCATTG---CGCTTGATTGTGACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASIVMLVFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--N-GTAAS-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927202 [unk-Proteo2-Glaciecola] PRGD_OTU006_500bfaf2ffd53a1087daefe9a61b05d3 gb|KJ927202| PRGD_OTU006_500bfaf2ffd53a1087daefe9a61b05d3, putative proteorhodopsin gene, partial cds. PRGD_OTU006_500bfaf2ffd53a1087daefe9a61b05d3, putative proteorhodopsin gene, partial cds. KJ927202 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.935 18.508 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) CTGCTAACGGTACCGCTGCAAATTATCGAGTTCTATCTGATTCTTGCAGCTATCGCTGTAGTTCGCGCGGCTTTGTTCTGGAAGCTCATGATCGCCTCCATCGTGATGCTGGTCTTCGGCTTCGTGGGCGAACTTGAAGCGATGAACTACTGGCTTGCATTCGCAATCGGGATGGCTGGCTGGTTCTACATCATCTATGAGATCTTCATTGGTGAAGCGAGCCAGGTCAGTGCTGCCAATGGTACGGCTGCAAGCCAAGCTGCGTTTAACGCATTGCGCTTGATTGTGACCGTA LLTVPLQIIEFYLILAAIAVVRAALFWKLMIASIVMLVFGFVGELEAMNYWLAFAIGMAGWFYIIYEIFIGEASQVSAANGTAASQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTAACGGTACCGCTGCAAATTATCGAGTTCTATCTGATTCTTGCAGCT---------ATC---GCTGTAGTTCGCGCG---GCTTTG------------------------------------TTCTGGAAG---CTCATGATCGCCTCCATCGTGATGCTGGTCTTCGGCTTCGTGGGCGAA---------CTT------------------GAA------GCG---------------------------------ATG------------------------------------------------------------------AACTAC------------------TGGCTTGCA---TTCGCAATCGGGATGGCTGGCTGGTTCTACATCATCTATGAGATC---------------TTC------ATT---GGTGAAGCGAGCCAGGTCAGTGCTGCC------AAT---GGTACGGCTGCAAGC---CAA---GCT---GCG---TTT---AAC---GCATTG---CGCTTGATTGTGACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASIVMLVFGFVGE---L------E--A-----------M----------------------NY------WLA-FAIGMAGWFYIIYEI-----F--I-GEASQVSAA--N-GTAAS-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927231 [unk-Proteo2-Glaciecola] PRGD_OTU006_c0e21942d1cabc8c84315ba03e2303f4 gb|KJ927231| PRGD_OTU006_c0e21942d1cabc8c84315ba03e2303f4, putative proteorhodopsin gene, partial cds. PRGD_OTU006_c0e21942d1cabc8c84315ba03e2303f4, putative proteorhodopsin gene, partial cds. KJ927231 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419) CTGCTAACGGTACCGCTGCAAATTATCGAGTTCTATCTGATTCTTGCGGCTATCGCTGTAGTTCGCGCGGCTTTGTTCTGGAAGCTAATGATCGCCTCCATCGTGATGCTGGTCTTCGGCTTCGTGGGCGAACTTGGCGCGATGAGCTACTGGCCTGCATTCGCAATCGGGATGGCTGGCTGGTTTTACATCATCTATGAGATCTTCTTTGGTGAGGCGAGCCAGATCAGTGCTGCCAGTGGTACGGCTGCAAGCCAAGCTGCGTTTAACGCATTGCGCTTGATTGTAACCGTA LLTVPLQIIEFYLILAAIAVVRAALFWKLMIASIVMLVFGFVGELGAMSYWPAFAIGMAGWFYIIYEIFFGEASQISAASGTAASQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTAACGGTACCGCTGCAAATTATCGAGTTCTATCTGATTCTTGCGGCT---------ATC---GCTGTAGTTCGCGCG---GCTTTG------------------------------------TTCTGGAAG---CTAATGATCGCCTCCATCGTGATGCTGGTCTTCGGCTTCGTGGGCGAA---------CTT------------------GGC------GCG---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCA---TTCGCAATCGGGATGGCTGGCTGGTTTTACATCATCTATGAGATC---------------TTC------TTT---GGTGAGGCGAGCCAGATCAGTGCTGCC------AGT---GGTACGGCTGCAAGC---CAA---GCT---GCG---TTT---AAC---GCATTG---CGCTTGATTGTAACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASIVMLVFGFVGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWFYIIYEI-----F--F-GEASQISAA--S-GTAAS-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927183 [unk-Proteo2-Glaciecola] PRGD_OTU006_1a77edc45ddea483c162008651ae1699 gb|KJ927183| PRGD_OTU006_1a77edc45ddea483c162008651ae1699, putative proteorhodopsin gene, partial cds. PRGD_OTU006_1a77edc45ddea483c162008651ae1699, putative proteorhodopsin gene, partial cds. KJ927183 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGTTAACGGTACCGCTGCAAATTATCGAGTTCTATCTGATTCTTGCGGCTATCGCTGTAGTCCGCGCGGCTCTGTTTTGGAAGCTTATGATCGCGTCCCTGGTGATGTTGATCTTCGGCTTCTTGGGCGAGCTTGGCGCAATGAGCTACTGGCCTGCGTTCGCAATCGGGATGGCTGGATGGTTGTACATCATCTACGAGATCTTCGCAGGTGAAGCAAGCCAGATCAGTGCTGCCAATGGTACGGCTGCAAGCCAGACCGCGTTCAACGCATTGCGCTTGATTGTGACCGTC LLTVPLQIIEFYLILAAIAVVRAALFWKLMIASLVMLIFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAANGTAASQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACGGTACCGCTGCAAATTATCGAGTTCTATCTGATTCTTGCGGCT---------ATC---GCTGTAGTCCGCGCG---GCTCTG------------------------------------TTTTGGAAG---CTTATGATCGCGTCCCTGGTGATGTTGATCTTCGGCTTCTTGGGCGAG---------CTT------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCG---TTCGCAATCGGGATGGCTGGATGGTTGTACATCATCTACGAGATC---------------TTC------GCA---GGTGAAGCAAGCCAGATCAGTGCTGCC------AAT---GGTACGGCTGCAAGC---CAG---ACC---GCG---TTC---AAC---GCATTG---CGCTTGATTGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLIFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--N-GTAAS-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927224 [unk-Proteo2-Glaciecola] PRGD_OTU006_ae6896c69cc934abde3b4093bdaa2685 gb|KJ927224| PRGD_OTU006_ae6896c69cc934abde3b4093bdaa2685, putative proteorhodopsin gene, partial cds. PRGD_OTU006_ae6896c69cc934abde3b4093bdaa2685, putative proteorhodopsin gene, partial cds. KJ927224 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-33.28, 45.35) CTGTTAACGGTACCGCTGCAAATTATCGAGTTCTATCTGATTCTTGCGGCTATCGCTGTAGTCCGCGCGGCTCTGTTTTGGAAGCTTATGATCGCGTCCCTGGTGATGTTGATCTTCGGTTTCTTAGGCGAGCTTGGCGCAATGAGCTACTGGCCTGCGTTCGCAATCGGGATGGCTGGCTGGTTATACATCATCTACGAGATCTTCGCAGGTGAAGCAAGCCAGATCAGTGCTGCCAATGGTACGGCTGCAAGCCAGACCGCATTCAATGCGTTGCGCTTGATTGTGACCGTC LLTVPLQIIEFYLILAAIAVVRAALFWKLMIASLVMLIFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAANGTAASQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACGGTACCGCTGCAAATTATCGAGTTCTATCTGATTCTTGCGGCT---------ATC---GCTGTAGTCCGCGCG---GCTCTG------------------------------------TTTTGGAAG---CTTATGATCGCGTCCCTGGTGATGTTGATCTTCGGTTTCTTAGGCGAG---------CTT------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCG---TTCGCAATCGGGATGGCTGGCTGGTTATACATCATCTACGAGATC---------------TTC------GCA---GGTGAAGCAAGCCAGATCAGTGCTGCC------AAT---GGTACGGCTGCAAGC---CAG---ACC---GCA---TTC---AAT---GCGTTG---CGCTTGATTGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLIFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--N-GTAAS-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927223 [unk-Proteo2-Glaciecola] PRGD_OTU006_a397d638424a8a6b50b56596f6da0ad9 gb|KJ927223| PRGD_OTU006_a397d638424a8a6b50b56596f6da0ad9, putative proteorhodopsin gene, partial cds. PRGD_OTU006_a397d638424a8a6b50b56596f6da0ad9, putative proteorhodopsin gene, partial cds. KJ927223 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTGTTAACGGTACCGCTGCAAATTATCGAGTTCTATCTGATTCTTGCGGCTATCGCTGTAGTCCGCGCTGCTCTGTTTTGGAAGCTTATGATCGCGTCCCTGGTGATGTTGATCTTCGGTTTCTTGGGCGAGCTTGGCGCAATGAGCTACTGGCCTGCGTTCGCAATCGGGATGGCTGGCTGGTTTTACATTATCTACGAGATCTTCGCAGGTGAAGCAAGCCAGATCAGTGCTGCCAATGGTACGGCTGCAAGCCAGACCGCGTTCAACGCATTGCGCTTGATTGTGACCGTC LLTVPLQIIEFYLILAAIAVVRAALFWKLMIASLVMLIFGFLGELGAMSYWPAFAIGMAGWFYIIYEIFAGEASQISAANGTAASQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACGGTACCGCTGCAAATTATCGAGTTCTATCTGATTCTTGCGGCT---------ATC---GCTGTAGTCCGCGCT---GCTCTG------------------------------------TTTTGGAAG---CTTATGATCGCGTCCCTGGTGATGTTGATCTTCGGTTTCTTGGGCGAG---------CTT------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCG---TTCGCAATCGGGATGGCTGGCTGGTTTTACATTATCTACGAGATC---------------TTC------GCA---GGTGAAGCAAGCCAGATCAGTGCTGCC------AAT---GGTACGGCTGCAAGC---CAG---ACC---GCG---TTC---AAC---GCATTG---CGCTTGATTGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLIFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWFYIIYEI-----F--A-GEASQISAA--N-GTAAS-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927228 [unk-Proteo2-Glaciecola] PRGD_OTU006_b6a07ed14e4e410fa82973769ddf0579 gb|KJ927228| PRGD_OTU006_b6a07ed14e4e410fa82973769ddf0579, putative proteorhodopsin gene, partial cds. PRGD_OTU006_b6a07ed14e4e410fa82973769ddf0579, putative proteorhodopsin gene, partial cds. KJ927228 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-23.5956, 69.0419) CTGTTAACGGTACCGCTGCAAATTATCGAGTTCTATCTGATTCTTGCGGCTATCGCTGTAGTCCGCGCGGCTCTGTTTTGGAAGCTTATGATCGCGTCCTTGGTGATGTTGATCTTCGGTTTCTTGGGCGAGCTTGGCGCAATGAGCTACTGGCCTGCGTTCGCAATCGGGATGGCTGGCTGGATTTACATCATCTACGAGATCTTCGCAGGTGAAGCAAGCCAGATCAGTGCTGCCAATGGTACGGCTGCAAGCCAGACCGCGTTCAACGCATTGCGCTTGATTGTGACCGTC LLTVPLQIIEFYLILAAIAVVRAALFWKLMIASLVMLIFGFLGELGAMSYWPAFAIGMAGWIYIIYEIFAGEASQISAANGTAASQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACGGTACCGCTGCAAATTATCGAGTTCTATCTGATTCTTGCGGCT---------ATC---GCTGTAGTCCGCGCG---GCTCTG------------------------------------TTTTGGAAG---CTTATGATCGCGTCCTTGGTGATGTTGATCTTCGGTTTCTTGGGCGAG---------CTT------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCG---TTCGCAATCGGGATGGCTGGCTGGATTTACATCATCTACGAGATC---------------TTC------GCA---GGTGAAGCAAGCCAGATCAGTGCTGCC------AAT---GGTACGGCTGCAAGC---CAG---ACC---GCG---TTC---AAC---GCATTG---CGCTTGATTGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLIFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWIYIIYEI-----F--A-GEASQISAA--N-GTAAS-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927225 [unk-Proteo2-Glaciecola] PRGD_OTU006_afa9e09588a5996d62d5b3d81bdbb44e gb|KJ927225| PRGD_OTU006_afa9e09588a5996d62d5b3d81bdbb44e, putative proteorhodopsin gene, partial cds. PRGD_OTU006_afa9e09588a5996d62d5b3d81bdbb44e, putative proteorhodopsin gene, partial cds. KJ927225 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-33.28, 45.35) CTGTTAACGGTACCGCTGCAAATTATCGAGTTTTACTTGATTCTTGCGGCTATCGCTGTAGTCCGCGCGGCTCTGTTTTGGAAGCTTATGATCGCGTCCCTAGTGATGTTGATCTTCGGTTTCTTGGGCGAGCTTGGCGCAATGAGCTACTGGCCTGCGTTCGCAATCGGGATGGCTGGCTGGTTGTACATCATCTACGAGATCTTCGCAGGTGAAGCAAGCCAGATCAGTGCTGCCAATGGTACGGCTGCAAGCCAGACCGCGTTCAACGCATTGCGCTTGATTGTGACCGTC LLTVPLQIIEFYLILAAIAVVRAALFWKLMIASLVMLIFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAANGTAASQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACGGTACCGCTGCAAATTATCGAGTTTTACTTGATTCTTGCGGCT---------ATC---GCTGTAGTCCGCGCG---GCTCTG------------------------------------TTTTGGAAG---CTTATGATCGCGTCCCTAGTGATGTTGATCTTCGGTTTCTTGGGCGAG---------CTT------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCG---TTCGCAATCGGGATGGCTGGCTGGTTGTACATCATCTACGAGATC---------------TTC------GCA---GGTGAAGCAAGCCAGATCAGTGCTGCC------AAT---GGTACGGCTGCAAGC---CAG---ACC---GCG---TTC---AAC---GCATTG---CGCTTGATTGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLIFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--N-GTAAS-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927209 [unk-Proteo2-Glaciecola] PRGD_OTU006_80b2804cac7509c7806aee06a4a56d49 gb|KJ927209| PRGD_OTU006_80b2804cac7509c7806aee06a4a56d49, putative proteorhodopsin gene, partial cds. PRGD_OTU006_80b2804cac7509c7806aee06a4a56d49, putative proteorhodopsin gene, partial cds. KJ927209 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) CTGTTAACGGTGCCGCTGCAAATTATCGAGTTCTATCTGATTCTTGCGGCTATCGCTGTAGTCCGCGCGGCTCTGTTTTGGAAGCTTATGATCGCGTCCCTGGTGATGTTGGTCTTCGGTTTCTTGGGCGAGCTTGGCGCAATGAGCTACTGGCCTGCGTTCGCAATCGGGATGGCTGGCTGGTTGTACATCATCTACGAGATCTTCGCAGGTGAAGCAAGCCAGATCAGTGCTGCCAATGGAACGGCTGCAAGCCAAACCGCGTTCAACGCATTGCGCTTGATTGTGACCGTC LLTVPLQIIEFYLILAAIAVVRAALFWKLMIASLVMLVFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAANGTAASQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACGGTGCCGCTGCAAATTATCGAGTTCTATCTGATTCTTGCGGCT---------ATC---GCTGTAGTCCGCGCG---GCTCTG------------------------------------TTTTGGAAG---CTTATGATCGCGTCCCTGGTGATGTTGGTCTTCGGTTTCTTGGGCGAG---------CTT------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCG---TTCGCAATCGGGATGGCTGGCTGGTTGTACATCATCTACGAGATC---------------TTC------GCA---GGTGAAGCAAGCCAGATCAGTGCTGCC------AAT---GGAACGGCTGCAAGC---CAA---ACC---GCG---TTC---AAC---GCATTG---CGCTTGATTGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLVFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--N-GTAAS-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927187 [unk-Proteo2-Glaciecola] PRGD_OTU006_26fcae97c31755a25094c69d5f4afa04 gb|KJ927187| PRGD_OTU006_26fcae97c31755a25094c69d5f4afa04, putative proteorhodopsin gene, partial cds. PRGD_OTU006_26fcae97c31755a25094c69d5f4afa04, putative proteorhodopsin gene, partial cds. KJ927187 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Mediterranean Sea (33.935, 18.508), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTGTTAACGGTACCGCTGCAAATTATCGAGTTCTATCTGATTCTTGCGGCTATTGCTGTAGTCCGCGCGGCTTTGTTTTGGAAGCTTATGATCGCGTCCCTGGTGATGTTGGTCTTCGGTTTCTTGGGAGAGCTCGGCGCAATGAGCTACTGGCCTGCGTTCGCAATCGGGATGGCTGGCTGGTTGTACATTATCTACGAGATCTTCGCAGGTGAAGCAAGCCAGATCAGTGCTGCCAGTGGTACGGCTGCAAGCCAAACCGCGTTCAATGCATTGCGCTTGATTGTGACCGTC LLTVPLQIIEFYLILAAIAVVRAALFWKLMIASLVMLVFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAASGTAASQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACGGTACCGCTGCAAATTATCGAGTTCTATCTGATTCTTGCGGCT---------ATT---GCTGTAGTCCGCGCG---GCTTTG------------------------------------TTTTGGAAG---CTTATGATCGCGTCCCTGGTGATGTTGGTCTTCGGTTTCTTGGGAGAG---------CTC------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCG---TTCGCAATCGGGATGGCTGGCTGGTTGTACATTATCTACGAGATC---------------TTC------GCA---GGTGAAGCAAGCCAGATCAGTGCTGCC------AGT---GGTACGGCTGCAAGC---CAA---ACC---GCG---TTC---AAT---GCATTG---CGCTTGATTGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLVFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--S-GTAAS-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927192 [unk-Proteo2-Glaciecola] PRGD_OTU006_2e6a49b1584fad6e68dc309a1670fbee gb|KJ927192| PRGD_OTU006_2e6a49b1584fad6e68dc309a1670fbee, putative proteorhodopsin gene, partial cds. PRGD_OTU006_2e6a49b1584fad6e68dc309a1670fbee, putative proteorhodopsin gene, partial cds. KJ927192 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGTTAACGGTACCGCTGCAAATTATCGAGTTCTATCTGATTCTTGCGGCTATCGCTGTAGTCCGCGCGGCTTTGTTCTGGAAACTCATGGTCGCATCTATTGTGATGTTGGTCTTCGGTTTCTTGGGCGAGCTTGGCGCAATGAGCTACTGGCCTGCGTTCGCAATCGGGATGGCCGGCTGGTCGTACATCATCTACGAGATCTTCGCAGGTGAAGCAAGCCAGATCAGTGCTGCCAATGGTACGGCTGCAAGCCAAACCGCGTTCAACGCATTGCGCTTGATTGTGACCGTC LLTVPLQIIEFYLILAAIAVVRAALFWKLMVASIVMLVFGFLGELGAMSYWPAFAIGMAGWSYIIYEIFAGEASQISAANGTAASQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACGGTACCGCTGCAAATTATCGAGTTCTATCTGATTCTTGCGGCT---------ATC---GCTGTAGTCCGCGCG---GCTTTG------------------------------------TTCTGGAAA---CTCATGGTCGCATCTATTGTGATGTTGGTCTTCGGTTTCTTGGGCGAG---------CTT------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCG---TTCGCAATCGGGATGGCCGGCTGGTCGTACATCATCTACGAGATC---------------TTC------GCA---GGTGAAGCAAGCCAGATCAGTGCTGCC------AAT---GGTACGGCTGCAAGC---CAA---ACC---GCG---TTC---AAC---GCATTG---CGCTTGATTGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMVASIVMLVFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWSYIIYEI-----F--A-GEASQISAA--N-GTAAS-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927226 [unk-Proteo2-Glaciecola] PRGD_OTU006_afe73f506b23dcdb446a220ffae4248e gb|KJ927226| PRGD_OTU006_afe73f506b23dcdb446a220ffae4248e, putative proteorhodopsin gene, partial cds. PRGD_OTU006_afe73f506b23dcdb446a220ffae4248e, putative proteorhodopsin gene, partial cds. KJ927226 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGTTAACGGTTCCGCTGCAGATTATTGAGTTTTACTTGATTCTTGCGGCAATCGCAGTCGTTCGCGCGGCTTTGTTCTGGAAACTCATGGTCGCATCTATTGTGATGTTGGTCTTCGGTTTCTTGGGCGAACTTGGCGCAATGAGCTACTGGCCTGCATTCGCAATCGGGATGGCTGGCTGGTTGTACATCATCTATGAGATCTTCGCAGGTGAAGCAAGCCAGATCAGTGCTGCCAATGGAACGGCTGCAAGTCAAACCGCGTTCAACGCATTGCGCCTGATTGTGACCGTT LLTVPLQIIEFYLILAAIAVVRAALFWKLMVASIVMLVFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAANGTAASQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACGGTTCCGCTGCAGATTATTGAGTTTTACTTGATTCTTGCGGCA---------ATC---GCAGTCGTTCGCGCG---GCTTTG------------------------------------TTCTGGAAA---CTCATGGTCGCATCTATTGTGATGTTGGTCTTCGGTTTCTTGGGCGAA---------CTT------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCA---TTCGCAATCGGGATGGCTGGCTGGTTGTACATCATCTATGAGATC---------------TTC------GCA---GGTGAAGCAAGCCAGATCAGTGCTGCC------AAT---GGAACGGCTGCAAGT---CAA---ACC---GCG---TTC---AAC---GCATTG---CGCCTGATTGTGACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMVASIVMLVFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--N-GTAAS-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927243 [unk-Proteo2-Glaciecola] PRGD_OTU006_f93c85fbf185e35327500456bc83a8a3 gb|KJ927243| PRGD_OTU006_f93c85fbf185e35327500456bc83a8a3, putative proteorhodopsin gene, partial cds. PRGD_OTU006_f93c85fbf185e35327500456bc83a8a3, putative proteorhodopsin gene, partial cds. KJ927243 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-33.28, 45.35) CTGTTAACGGTTCCGCTGCAGATTATTGAGTTTTACTTGATTCTTGCGGCAATCGCAGTTGTTCGCGCGGCTTTGTTCTGGAAACTCATGGTCGCATCTATTGTGATGTTGGTCTTCGGTTTCTTGGGCGAACTTGGCGCAATGAGCTACTGGCCTGCATTCGCAATCGGGATGGCTGGCTGGTTGTACATCATCTATGAGATCTTCGCAGGTGAAGCAAGCCAGATCAGTGCTGCCAACGGTACGGCAGCAAGTCAAACCGCGTTCAACGCATTGCGCCTGATTGTGACCGTG LLTVPLQIIEFYLILAAIAVVRAALFWKLMVASIVMLVFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAANGTAASQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACGGTTCCGCTGCAGATTATTGAGTTTTACTTGATTCTTGCGGCA---------ATC---GCAGTTGTTCGCGCG---GCTTTG------------------------------------TTCTGGAAA---CTCATGGTCGCATCTATTGTGATGTTGGTCTTCGGTTTCTTGGGCGAA---------CTT------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCA---TTCGCAATCGGGATGGCTGGCTGGTTGTACATCATCTATGAGATC---------------TTC------GCA---GGTGAAGCAAGCCAGATCAGTGCTGCC------AAC---GGTACGGCAGCAAGT---CAA---ACC---GCG---TTC---AAC---GCATTG---CGCCTGATTGTGACCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMVASIVMLVFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--N-GTAAS-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927176 [unk-Proteo2-Glaciecola] PRGD_OTU006_017daa271676648797485ffc83150029 gb|KJ927176| PRGD_OTU006_017daa271676648797485ffc83150029, putative proteorhodopsin gene, partial cds. PRGD_OTU006_017daa271676648797485ffc83150029, putative proteorhodopsin gene, partial cds. KJ927176 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683), Indian Ocean (-33.28, 45.35) CTGTTAACGGTTCCGCTGCAGATTATTGAGTTCTACTTGATTCTTGCGGCAATCGCTGTTGTTCGCGCGGCTTTGTTCTGGAAACTCATGGTCGCATCTATTGTGATGTTGGTCTTCGGTTTCTTGGGCGAGCTTGGCGCAATGAGCTACTGGCCTGCATTCGCAATCGGGATGGCTGGCTGGTTGTACATCATCTACGAGATCTTCGCAGGTGAAGCTAGCCAGATCAGTGCTGCCAACGGTACGGCAGCAAGTCAAACCGCGTTCAACGCATTGCGCTTGATTGTGACCGTT LLTVPLQIIEFYLILAAIAVVRAALFWKLMVASIVMLVFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAANGTAASQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACGGTTCCGCTGCAGATTATTGAGTTCTACTTGATTCTTGCGGCA---------ATC---GCTGTTGTTCGCGCG---GCTTTG------------------------------------TTCTGGAAA---CTCATGGTCGCATCTATTGTGATGTTGGTCTTCGGTTTCTTGGGCGAG---------CTT------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCA---TTCGCAATCGGGATGGCTGGCTGGTTGTACATCATCTACGAGATC---------------TTC------GCA---GGTGAAGCTAGCCAGATCAGTGCTGCC------AAC---GGTACGGCAGCAAGT---CAA---ACC---GCG---TTC---AAC---GCATTG---CGCTTGATTGTGACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMVASIVMLVFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--N-GTAAS-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927182 [unk-Proteo2-Glaciecola] PRGD_OTU006_10a5862ba1f495854d5bb195da89b5e8 gb|KJ927182| PRGD_OTU006_10a5862ba1f495854d5bb195da89b5e8, putative proteorhodopsin gene, partial cds. PRGD_OTU006_10a5862ba1f495854d5bb195da89b5e8, putative proteorhodopsin gene, partial cds. KJ927182 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Indian Ocean (-14.48, 113.45) CTATTAACAGTGCCGCTACAAATTATCGAGTTTTACTTGATTCTCGCGGCCATCGCGGTAGTTCGCGCAGCTTTGTTCTGGAAACTCATGATTGCGTCTCTTGTGATGTTGATCTTCGGCTTCTTGGGCGAGCTTGGTGCAATGAGCTACTGGCCTGCATTCGCCATCGGGATGGCTGGCTGGTTGTACATCATCTACGAAATTTTCGCGGGTGAAGCGAGCCAGATCAGTGCCGCTAACGGTACGGCGGCAAGCCAAACTGCCTTTAACGCATTGCGTTTGATCGTGACTGTC LLTVPLQIIEFYLILAAIAVVRAALFWKLMIASLVMLIFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAANGTAASQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACAGTGCCGCTACAAATTATCGAGTTTTACTTGATTCTCGCGGCC---------ATC---GCGGTAGTTCGCGCA---GCTTTG------------------------------------TTCTGGAAA---CTCATGATTGCGTCTCTTGTGATGTTGATCTTCGGCTTCTTGGGCGAG---------CTT------------------GGT------GCA---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCA---TTCGCCATCGGGATGGCTGGCTGGTTGTACATCATCTACGAAATT---------------TTC------GCG---GGTGAAGCGAGCCAGATCAGTGCCGCT------AAC---GGTACGGCGGCAAGC---CAA---ACT---GCC---TTT---AAC---GCATTG---CGTTTGATCGTGACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLIFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--N-GTAAS-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927190 [unk-Proteo2-Glaciecola] PRGD_OTU006_2b4e9a441f938e4e5d5b4f2b945ccbe6 gb|KJ927190| PRGD_OTU006_2b4e9a441f938e4e5d5b4f2b945ccbe6, putative proteorhodopsin gene, partial cds. PRGD_OTU006_2b4e9a441f938e4e5d5b4f2b945ccbe6, putative proteorhodopsin gene, partial cds. KJ927190 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTATTAACAGTGCCGCTACAAATTATCGAGTTTTACTTGATTCTCGCGGCCATCGCGGTAGTTCGCGCGGCTTTATTCTGGAAACTCATGATTGCGTCTCTTGTGATGTTAATCTTCGGTTTCTTGGGCGAGCTTGGTGCGATGAGCTACTGGCCTGCATTCGCCATCGGGATGGCTGGCTGGTTGTACATCATCTACGAAATTTTCGCGGGTGAAGCGAGCCAGATTAGTGCCGCTAACGGAACGGCGGCAAGCCAAACTGCGTTTAACGCATTGCGTTTGATTGTGACCGTC LLTVPLQIIEFYLILAAIAVVRAALFWKLMIASLVMLIFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAANGTAASQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACAGTGCCGCTACAAATTATCGAGTTTTACTTGATTCTCGCGGCC---------ATC---GCGGTAGTTCGCGCG---GCTTTA------------------------------------TTCTGGAAA---CTCATGATTGCGTCTCTTGTGATGTTAATCTTCGGTTTCTTGGGCGAG---------CTT------------------GGT------GCG---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCA---TTCGCCATCGGGATGGCTGGCTGGTTGTACATCATCTACGAAATT---------------TTC------GCG---GGTGAAGCGAGCCAGATTAGTGCCGCT------AAC---GGAACGGCGGCAAGC---CAA---ACT---GCG---TTT---AAC---GCATTG---CGTTTGATTGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLIFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--N-GTAAS-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927221 [unk-Proteo2-Glaciecola] PRGD_OTU006_a10acee28644023b431a004f32a14407 gb|KJ927221| PRGD_OTU006_a10acee28644023b431a004f32a14407, putative proteorhodopsin gene, partial cds. PRGD_OTU006_a10acee28644023b431a004f32a14407, putative proteorhodopsin gene, partial cds. KJ927221 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTATTAACAGTGCCGCTACAAATTATCGAGTTTTACTTGATTCTCGCGGCTATCGCGGTAGTTCGCGCAGCTTTGTTCTGGAAACTCATGATTGCGTCTCTTGTGATGTTGATCTTCGGTTTCTTGGGCGAGCTTGGTGCAATGAGCTACTGGCCCGCATTCGCCATCGGGATGGCTGGCTGGTTGTACATCATCTACGAAATTTTCGCGGGTGAAGCGAGCCAGATCAGTGCCGCTAACGGTACGGCGGCAAGCCAAACTGCGTTTAACGCATTGCGTTTGATCGTGACTGTT LLTVPLQIIEFYLILAAIAVVRAALFWKLMIASLVMLIFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAANGTAASQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACAGTGCCGCTACAAATTATCGAGTTTTACTTGATTCTCGCGGCT---------ATC---GCGGTAGTTCGCGCA---GCTTTG------------------------------------TTCTGGAAA---CTCATGATTGCGTCTCTTGTGATGTTGATCTTCGGTTTCTTGGGCGAG---------CTT------------------GGT------GCA---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCCGCA---TTCGCCATCGGGATGGCTGGCTGGTTGTACATCATCTACGAAATT---------------TTC------GCG---GGTGAAGCGAGCCAGATCAGTGCCGCT------AAC---GGTACGGCGGCAAGC---CAA---ACT---GCG---TTT---AAC---GCATTG---CGTTTGATCGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLIFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--N-GTAAS-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927197 [unk-Proteo2-Glaciecola] PRGD_OTU006_417b6c056d190d6832cfacb8a876f3d8 gb|KJ927197| PRGD_OTU006_417b6c056d190d6832cfacb8a876f3d8, putative proteorhodopsin gene, partial cds. PRGD_OTU006_417b6c056d190d6832cfacb8a876f3d8, putative proteorhodopsin gene, partial cds. KJ927197 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTCTTAACAGTGCCGCTACAAATAATCGAGTTTTACTTGATTCTCGCGGCTATCGCGGTAGTTCGCGCAGCTTTGTTCTGGAAACTCATGATTGCGTCTCTTGTGATGTTGATCTTCGGTTTCTTGGGCGAGCTTGGTGCAATGAGCTACTGGCCGGCATTCGCCATCGGGATGGCTGGCTGGTTGTATATCATCTACGAGATTTTCGCGGGTGAAGCGAGCCAGATCAGTGCCGCTAACGGAACGGCGGCAAGCCAAACTGCGTTTAACGCATTGCGTTTGATCGTGACTGTT LLTVPLQIIEFYLILAAIAVVRAALFWKLMIASLVMLIFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAANGTAASQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACAGTGCCGCTACAAATAATCGAGTTTTACTTGATTCTCGCGGCT---------ATC---GCGGTAGTTCGCGCA---GCTTTG------------------------------------TTCTGGAAA---CTCATGATTGCGTCTCTTGTGATGTTGATCTTCGGTTTCTTGGGCGAG---------CTT------------------GGT------GCA---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCGGCA---TTCGCCATCGGGATGGCTGGCTGGTTGTATATCATCTACGAGATT---------------TTC------GCG---GGTGAAGCGAGCCAGATCAGTGCCGCT------AAC---GGAACGGCGGCAAGC---CAA---ACT---GCG---TTT---AAC---GCATTG---CGTTTGATCGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLIFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--N-GTAAS-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927201 [unk-Proteo2-Glaciecola] PRGD_OTU006_4e541e81398a686f72c19b5a28ecbbee gb|KJ927201| PRGD_OTU006_4e541e81398a686f72c19b5a28ecbbee, putative proteorhodopsin gene, partial cds. PRGD_OTU006_4e541e81398a686f72c19b5a28ecbbee, putative proteorhodopsin gene, partial cds. KJ927201 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTCTTAACAGTGCCGTTACAAATTATCGAGTTTTACTTGATTCTAGCGGCTATCGCGGTAGTTCGCGCAGCTTTGTTCTGGAAACTCATGATTGCGTCTCTTGTGATGTTGATCTTCGGTTTCTTGGGCGAACTTGGTGCAATGAGCTACTGGCCTGCATTCGCCATCGGGATGGCTGGCTGGTTGTATATCATCTACGAGATTTTCGCGGGTGAAGCGAGCCAGATCAGTGCCGCTAACGGAACGGCGGCAAGCCAAACTGCGTTTAACGCATTGCGTTTGATTGTGACCGTT LLTVPLQIIEFYLILAAIAVVRAALFWKLMIASLVMLIFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAANGTAASQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACAGTGCCGTTACAAATTATCGAGTTTTACTTGATTCTAGCGGCT---------ATC---GCGGTAGTTCGCGCA---GCTTTG------------------------------------TTCTGGAAA---CTCATGATTGCGTCTCTTGTGATGTTGATCTTCGGTTTCTTGGGCGAA---------CTT------------------GGT------GCA---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCA---TTCGCCATCGGGATGGCTGGCTGGTTGTATATCATCTACGAGATT---------------TTC------GCG---GGTGAAGCGAGCCAGATCAGTGCCGCT------AAC---GGAACGGCGGCAAGC---CAA---ACT---GCG---TTT---AAC---GCATTG---CGTTTGATTGTGACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLIFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--N-GTAAS-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927230 [unk-Proteo2-Glaciecola] PRGD_OTU006_bc213f827b6e79c01b129375a6f13237 gb|KJ927230| PRGD_OTU006_bc213f827b6e79c01b129375a6f13237, putative proteorhodopsin gene, partial cds. PRGD_OTU006_bc213f827b6e79c01b129375a6f13237, putative proteorhodopsin gene, partial cds. KJ927230 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTCTTAACAGTGCCGCTACAAATTATCGAGTTTTACTTGATTCTCGCGGCCATCGCGGTAGTTCGCGCTGCTTTGTTCTGGAAGCTCATGATCGCCTCAATTGTGATGCTGGTCTTCGGTTTCTTGGGCGAACTTGGTGCTATGAGCTATTGGCCTGCATTCGCCATCGGGATGGCTGGCTGGTTGTACATCATCTACGAGATTTTCGCAGGTGAGGCAAGCCAGATCAGTGCTGCCAGCGGCACTGCTGCAAGTCAAACAGCGTTTAACGCATTGCGTTTGATAGTGACCGTC LLTVPLQIIEFYLILAAIAVVRAALFWKLMIASIVMLVFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAASGTAASQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACAGTGCCGCTACAAATTATCGAGTTTTACTTGATTCTCGCGGCC---------ATC---GCGGTAGTTCGCGCT---GCTTTG------------------------------------TTCTGGAAG---CTCATGATCGCCTCAATTGTGATGCTGGTCTTCGGTTTCTTGGGCGAA---------CTT------------------GGT------GCT---------------------------------ATG------------------------------------------------------------------AGCTAT------------------TGGCCTGCA---TTCGCCATCGGGATGGCTGGCTGGTTGTACATCATCTACGAGATT---------------TTC------GCA---GGTGAGGCAAGCCAGATCAGTGCTGCC------AGC---GGCACTGCTGCAAGT---CAA---ACA---GCG---TTT---AAC---GCATTG---CGTTTGATAGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASIVMLVFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--S-GTAAS-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927238 [unk-Proteo2-Glaciecola] PRGD_OTU006_d67bb2ea8ac0f5c01275a94d1446356b gb|KJ927238| PRGD_OTU006_d67bb2ea8ac0f5c01275a94d1446356b, putative proteorhodopsin gene, partial cds. PRGD_OTU006_d67bb2ea8ac0f5c01275a94d1446356b, putative proteorhodopsin gene, partial cds. KJ927238 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTCTTAACAGTGCCGCTACAAATTATCGAGTTTTACTTGATTCTCGCGGCCATCGCGGTAGTTCGCGCTGCTTTGTTCTGGAAGCTCATGATCGCCTCAATTGTGATGCTGGTCTTCGGTTTCTTGGGCGAACTTGGTGCTATGAGCTATTGGCCTGCATTCGCCATCGGGATGGCTGGCTGGCTGTACATCATCTACGAGATTTTCGCGGGTGAAGCGAGCCAGATCAGTGCTGCCAGCGGCACTGCTGCAAGCCAAACAGCGTTTAACGCATTGCGTTTGATAGTGACCGTC LLTVPLQIIEFYLILAAIAVVRAALFWKLMIASIVMLVFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAASGTAASQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACAGTGCCGCTACAAATTATCGAGTTTTACTTGATTCTCGCGGCC---------ATC---GCGGTAGTTCGCGCT---GCTTTG------------------------------------TTCTGGAAG---CTCATGATCGCCTCAATTGTGATGCTGGTCTTCGGTTTCTTGGGCGAA---------CTT------------------GGT------GCT---------------------------------ATG------------------------------------------------------------------AGCTAT------------------TGGCCTGCA---TTCGCCATCGGGATGGCTGGCTGGCTGTACATCATCTACGAGATT---------------TTC------GCG---GGTGAAGCGAGCCAGATCAGTGCTGCC------AGC---GGCACTGCTGCAAGC---CAA---ACA---GCG---TTT---AAC---GCATTG---CGTTTGATAGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASIVMLVFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--S-GTAAS-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927204 [unk-Proteo2-Glaciecola] PRGD_OTU006_6f34ecb8a2aa73aa9227f637151d5667 gb|KJ927204| PRGD_OTU006_6f34ecb8a2aa73aa9227f637151d5667, putative proteorhodopsin gene, partial cds. PRGD_OTU006_6f34ecb8a2aa73aa9227f637151d5667, putative proteorhodopsin gene, partial cds. KJ927204 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTATTAACAGTGCCGCTACAAATTATCGAGTTTTACTTGATTCTCGCGGCCATCGCGGTAGTTCGCGCGGCTTTGTTCTGGAAGCTCATGATCGCCTCAATTGTGATGCTGGTCTTCGGTTTCTTGGGCGAGCTTGGCGCTATGAGCTATTGGCCTGCATTCGCTATAGGGATGGCTGGCTGGTTGTATATTATCTACGAAATCTTCGCAGGTGAGGCAAGCCAGATCAGTGCTGCCAGCGGCACTGCTGCTAGTCAGACAGCGTTTAACGCATTGCGTTTGATCGTAACCGTC LLTVPLQIIEFYLILAAIAVVRAALFWKLMIASIVMLVFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAASGTAASQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACAGTGCCGCTACAAATTATCGAGTTTTACTTGATTCTCGCGGCC---------ATC---GCGGTAGTTCGCGCG---GCTTTG------------------------------------TTCTGGAAG---CTCATGATCGCCTCAATTGTGATGCTGGTCTTCGGTTTCTTGGGCGAG---------CTT------------------GGC------GCT---------------------------------ATG------------------------------------------------------------------AGCTAT------------------TGGCCTGCA---TTCGCTATAGGGATGGCTGGCTGGTTGTATATTATCTACGAAATC---------------TTC------GCA---GGTGAGGCAAGCCAGATCAGTGCTGCC------AGC---GGCACTGCTGCTAGT---CAG---ACA---GCG---TTT---AAC---GCATTG---CGTTTGATCGTAACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASIVMLVFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--S-GTAAS-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927220 [unk-Proteo2-Glaciecola] PRGD_OTU006_a0fe7ec46056c090b50b6a42eaecfd8a gb|KJ927220| PRGD_OTU006_a0fe7ec46056c090b50b6a42eaecfd8a, putative proteorhodopsin gene, partial cds. PRGD_OTU006_a0fe7ec46056c090b50b6a42eaecfd8a, putative proteorhodopsin gene, partial cds. KJ927220 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCTTAACAGTGCCGCTACAAATTATCGAGTTTTACTTGATTCTCGCGGCCATCGCGGTAGTTCGCGCTGCTTTGTTCTGGAAGCTCATGATCGCCTCAATTGTGATGCTGGTCTTCGGTTTCTTGGGCGAACTTGGTGCTATGAGCTATTGGCCTGCATTCGCCATCGGGATGGCTGGCTGGTTGTACATCATCTACGAGATTTTCGCAGGTGAGGCAAGCCAGATCAGTGCTGCCAGCGGTACGGCGGCAAGCCAAACTGCGTTTAACGCATTGCGTTTGATCGTGACTGTC LLTVPLQIIEFYLILAAIAVVRAALFWKLMIASIVMLVFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAASGTAASQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACAGTGCCGCTACAAATTATCGAGTTTTACTTGATTCTCGCGGCC---------ATC---GCGGTAGTTCGCGCT---GCTTTG------------------------------------TTCTGGAAG---CTCATGATCGCCTCAATTGTGATGCTGGTCTTCGGTTTCTTGGGCGAA---------CTT------------------GGT------GCT---------------------------------ATG------------------------------------------------------------------AGCTAT------------------TGGCCTGCA---TTCGCCATCGGGATGGCTGGCTGGTTGTACATCATCTACGAGATT---------------TTC------GCA---GGTGAGGCAAGCCAGATCAGTGCTGCC------AGC---GGTACGGCGGCAAGC---CAA---ACT---GCG---TTT---AAC---GCATTG---CGTTTGATCGTGACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASIVMLVFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--S-GTAAS-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927211 [unk-Proteo2-Glaciecola] PRGD_OTU006_83aac513abd90ee1524aafc228a68ed2 gb|KJ927211| PRGD_OTU006_83aac513abd90ee1524aafc228a68ed2, putative proteorhodopsin gene, partial cds. PRGD_OTU006_83aac513abd90ee1524aafc228a68ed2, putative proteorhodopsin gene, partial cds. KJ927211 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGTTAACGGTTCCGCTGCAGATTATCGAGTTTTACTTGATTCTTGCGGCTATCGCTGTCGTTCGCGCGGCTTTGTTTTGGAAGCTCATGATTGCATCTCTTGTGATGTTGATTTTCGGTTTCTTGGGCGAACTTGGCGCAATGAGCTACTGGCCTGCATTCATAATCGGAATGCTGGCTTGGATCTACATTATCTACGAGATTTTTGCCGGAGAAGCTAGCCAAATTAGCGCTGCAAATGGCACGGCTGCGAGCCAGACTGCGTTTAACGCGCTACGCTGGATTGTAAGTGTT LLTVPLQIIEFYLILAAIAVVRAALFWKLMIASLVMLIFGFLGELGAMSYWPAFIIGMLAWIYIIYEIFAGEASQISAANGTAASQTAFNALRWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACGGTTCCGCTGCAGATTATCGAGTTTTACTTGATTCTTGCGGCT---------ATC---GCTGTCGTTCGCGCG---GCTTTG------------------------------------TTTTGGAAG---CTCATGATTGCATCTCTTGTGATGTTGATTTTCGGTTTCTTGGGCGAA---------CTT------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCA---TTCATAATCGGAATGCTGGCTTGGATCTACATTATCTACGAGATT---------------TTT------GCC---GGAGAAGCTAGCCAAATTAGCGCTGCA------AAT---GGCACGGCTGCGAGC---CAG---ACT---GCG---TTT---AAC---GCGCTA---CGCTGGATTGTAAGTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLIFGFLGE---L------G--A-----------M----------------------SY------WPA-FIIGMLAWIYIIYEI-----F--A-GEASQISAA--N-GTAAS-Q-T-A-F-N-AL-RWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927240 [unk-Proteo2-Glaciecola] PRGD_OTU006_e083659f1a8649aa567509b28ecd05d8 gb|KJ927240| PRGD_OTU006_e083659f1a8649aa567509b28ecd05d8, putative proteorhodopsin gene, partial cds. PRGD_OTU006_e083659f1a8649aa567509b28ecd05d8, putative proteorhodopsin gene, partial cds. KJ927240 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTGTTAACGGTTCCGCTGCAGATTATCGAGTTTTACTTGATTCTTGCGGCTATCGCTGTCGTTCGCGCGGCTTTGTTTTGGAAGCTCATGATTGCATCTCTTGTGATGTTGATTTTCGGTTTCTTGGGCGAACTCGGCGCAATGAGCTACTGGCCTGCATTCATAATCGGAATGCTGGCTTGGATCTACATTATCTACGAGATTTTTGCCGGCGAAGCCAGCCAAATTAGCGCTGCAAATGGCACGGCTGCGAGCCAGACTGCGTTTAACGCGCTACGCTGGATTGTAAGTGTT LLTVPLQIIEFYLILAAIAVVRAALFWKLMIASLVMLIFGFLGELGAMSYWPAFIIGMLAWIYIIYEIFAGEASQISAANGTAASQTAFNALRWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACGGTTCCGCTGCAGATTATCGAGTTTTACTTGATTCTTGCGGCT---------ATC---GCTGTCGTTCGCGCG---GCTTTG------------------------------------TTTTGGAAG---CTCATGATTGCATCTCTTGTGATGTTGATTTTCGGTTTCTTGGGCGAA---------CTC------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCA---TTCATAATCGGAATGCTGGCTTGGATCTACATTATCTACGAGATT---------------TTT------GCC---GGCGAAGCCAGCCAAATTAGCGCTGCA------AAT---GGCACGGCTGCGAGC---CAG---ACT---GCG---TTT---AAC---GCGCTA---CGCTGGATTGTAAGTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLIFGFLGE---L------G--A-----------M----------------------SY------WPA-FIIGMLAWIYIIYEI-----F--A-GEASQISAA--N-GTAAS-Q-T-A-F-N-AL-RWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927227 [unk-Proteo2-Glaciecola] PRGD_OTU006_b531834d62ba2d127b985864fb2d3315 gb|KJ927227| PRGD_OTU006_b531834d62ba2d127b985864fb2d3315, putative proteorhodopsin gene, partial cds. PRGD_OTU006_b531834d62ba2d127b985864fb2d3315, putative proteorhodopsin gene, partial cds. KJ927227 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) CTGCTAACGGTTCCGCTACAAATTATCGAGTTTTACTTGATTCTCGCGGCTATCGCTGTAGTTCGCGCTGCTTTGTTCTGGAAACTCATGATTGCATCTATTGTGATGTTGATCTTCGGTTTCTTGGGCGAGCTTGGCGCAATGAGCTACTGGCCTGCGTTCATAATCGGCATGCTGGCTTGGATCTACATTATCTACGAGATTTTTTTTGGCGAAGCCAGCCAAATTAGCGCTGCCAATGGTACGCCTGCGAGCCAGACCGCGTTTAACGCGCTACGCTGGATCGTAAGTGTT LLTVPLQIIEFYLILAAIAVVRAALFWKLMIASIVMLIFGFLGELGAMSYWPAFIIGMLAWIYIIYEIFFGEASQISAANGTPASQTAFNALRWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTAACGGTTCCGCTACAAATTATCGAGTTTTACTTGATTCTCGCGGCT---------ATC---GCTGTAGTTCGCGCT---GCTTTG------------------------------------TTCTGGAAA---CTCATGATTGCATCTATTGTGATGTTGATCTTCGGTTTCTTGGGCGAG---------CTT------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCG---TTCATAATCGGCATGCTGGCTTGGATCTACATTATCTACGAGATT---------------TTT------TTT---GGCGAAGCCAGCCAAATTAGCGCTGCC------AAT---GGTACGCCTGCGAGC---CAG---ACC---GCG---TTT---AAC---GCGCTA---CGCTGGATCGTAAGTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASIVMLIFGFLGE---L------G--A-----------M----------------------SY------WPA-FIIGMLAWIYIIYEI-----F--F-GEASQISAA--N-GTPAS-Q-T-A-F-N-AL-RWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927205 [unk-Proteo2-Glaciecola] PRGD_OTU006_72ed91fd97044d33c4ef379f76bacc7a gb|KJ927205| PRGD_OTU006_72ed91fd97044d33c4ef379f76bacc7a, putative proteorhodopsin gene, partial cds. PRGD_OTU006_72ed91fd97044d33c4ef379f76bacc7a, putative proteorhodopsin gene, partial cds. KJ927205 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGTTGACCGTTCCATTGCAGATTATCGAGTTCTACTTGATTCTCGCTGCAATCGCGGTAGTTCGGGCTGCTTTGTTCTGGAAGCTTATGATCGCATCACTTGTGATGTTGGTATTTGGCTTCTTGGGCGAACTCGGTGCGATGAGCTACTGGCCTGCATTTGCCATCGGGATGGCCGGCTGGTTGTACATCATCTACGAAATCTTCGCAGGTGAGGCAAGCCAAATCAGTGCTGCAAACGGCACAGCCGCGAGTCAAACCGCATTCAACGCGTTGCGACTTATTGTAACCGTT LLTVPLQIIEFYLILAAIAVVRAALFWKLMIASLVMLVFGFLGELGAMSYWPAFAIGMAGWLYIIYEIFAGEASQISAANGTAASQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTGACCGTTCCATTGCAGATTATCGAGTTCTACTTGATTCTCGCTGCA---------ATC---GCGGTAGTTCGGGCT---GCTTTG------------------------------------TTCTGGAAG---CTTATGATCGCATCACTTGTGATGTTGGTATTTGGCTTCTTGGGCGAA---------CTC------------------GGT------GCG---------------------------------ATG------------------------------------------------------------------AGCTAC------------------TGGCCTGCA---TTTGCCATCGGGATGGCCGGCTGGTTGTACATCATCTACGAAATC---------------TTC------GCA---GGTGAGGCAAGCCAAATCAGTGCTGCA------AAC---GGCACAGCCGCGAGT---CAA---ACC---GCA---TTC---AAC---GCGTTG---CGACTTATTGTAACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLVFGFLGE---L------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEI-----F--A-GEASQISAA--N-GTAAS-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927194 [unk-Proteo2-Glaciecola] PRGD_OTU006_32936219dbea6887225c92763e2719f2 gb|KJ927194| PRGD_OTU006_32936219dbea6887225c92763e2719f2, putative proteorhodopsin gene, partial cds. PRGD_OTU006_32936219dbea6887225c92763e2719f2, putative proteorhodopsin gene, partial cds. KJ927194 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.935 18.508 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (72.0542, -130.8781; ; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTGTTAACGGTGCCGCTGCAAATTGTAGAGTTCTACTTGATTCTTGCAGCAATCGCAGTGGTTCGCGCTGCTTTGTTCTGGAAGCTATTGATTGCATCCCTCGTGATGTTGATCTTCGGCTACCTGGGCGAACTGGGCGTAATGGACTACTGGTTGGCATTCGTTATCAGTATGGCTGGCTGGATCTACATCATCTACGAAATCTTCGCAGGTGAAGCGAGCCAGATCAGTGCTGCTAACGGAACAGCTGCAAGCCAAACCGCATTCAATGCTTTGCGCTTAATCGTAACCGTT LLTVPLQIVEFYLILAAIAVVRAALFWKLLIASLVMLIFGYLGELGVMDYWLAFVISMAGWIYIIYEIFAGEASQISAANGTAASQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACGGTGCCGCTGCAAATTGTAGAGTTCTACTTGATTCTTGCAGCA---------ATC---GCAGTGGTTCGCGCT---GCTTTG------------------------------------TTCTGGAAG---CTATTGATTGCATCCCTCGTGATGTTGATCTTCGGCTACCTGGGCGAA---------CTG------------------GGC------GTA---------------------------------ATG------------------------------------------------------------------GACTAC------------------TGGTTGGCA---TTCGTTATCAGTATGGCTGGCTGGATCTACATCATCTACGAAATC---------------TTC------GCA---GGTGAAGCGAGCCAGATCAGTGCTGCT------AAC---GGAACAGCTGCAAGC---CAA---ACC---GCA---TTC---AAT---GCTTTG---CGCTTAATCGTAACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LLIASLVMLIFGYLGE---L------G--V-----------M----------------------DY------WLA-FVISMAGWIYIIYEI-----F--A-GEASQISAA--N-GTAAS-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ929773 [unk-Proteo2-Glaciecola] PRGD_OTU238_c36d2334fa21dbeaa30c4dce7db3613e gb|KJ929773| PRGD_OTU238_c36d2334fa21dbeaa30c4dce7db3613e, putative proteorhodopsin gene, partial cds. PRGD_OTU238_c36d2334fa21dbeaa30c4dce7db3613e, putative proteorhodopsin gene, partial cds. KJ929773 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGCTTACCGTGCCCCTCCAAATTATCGAGTTCTACCTGATCCTCGCCGCGATTGCCGTGGTGCGCGTTGCGCTGTTCTGGCGCCTCCTTAGCGCTTCCCTTGTCATGCTGGTGTTCGGCTACGCCGGAGAGATCGACGCTATGAACGTCTGGCTCGCATTCGTCGTGGGAACCGCGGCATGGCTTTACATTATCTACGAGATCTTCGCTGGTGAGGCGAGTCGCATTAACGCCAACAATGGGTCGGCCGCAAGTCAGCGGGCCTTCTCCGCTCTGCGCATTATCGTCACGTTC LLTVPLQIIEFYLILAAIAVVRVALFWRLLSASLVMLVFGYAGEIDAMNVWLAFVVGTAAWLYIIYEIFAGEASRINANNGSAASQRAFSALRIIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTTACCGTGCCCCTCCAAATTATCGAGTTCTACCTGATCCTCGCCGCG---------ATT---GCCGTGGTGCGCGTT---GCGCTG------------------------------------TTCTGGCGC---CTCCTTAGCGCTTCCCTTGTCATGCTGGTGTTCGGCTACGCCGGAGAG---------ATC------------------GAC------GCT---------------------------------ATG------------------------------------------------------------------AACGTC------------------TGGCTCGCA---TTCGTCGTGGGAACCGCGGCATGGCTTTACATTATCTACGAGATC---------------TTC------GCT---GGTGAGGCGAGTCGCATTAACGCCAAC------AAT---GGGTCGGCCGCAAGT---CAG---CGG---GCC---TTC---TCC---GCTCTG---CGCATTATCGTCACGTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRV-AL------------FWR-LLSASLVMLVFGYAGE---I------D--A-----------M----------------------NV------WLA-FVVGTAAWLYIIYEI-----F--A-GEASRINAN--N-GSAAS-Q-R-A-F-S-AL-RIIVTF-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ929772 [unk-Proteo2-Glaciecola] PRGD_OTU238_otuREP_c5f908928c7c5e34f6a12f537734f51f gb|KJ929772| PRGD_OTU238_otuREP_c5f908928c7c5e34f6a12f537734f51f, putative proteorhodopsin gene, partial cds. PRGD_OTU238_otuREP_c5f908928c7c5e34f6a12f537734f51f, putative proteorhodopsin gene, partial cds. KJ929772 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) CTGCTTACCGTGCCCCTCCAAATCATCGAGTTCTACCTGATCCTCGCCGCAATTGCCGTGGTACGCGTTGCGCTGTTCTGGCGCCTCCTTAGCGCTTCACTTGTCATGCTGGTGTTCGGCTACGCCGGAGAAATCGACGCTATGAACGTCTGGCTCGCCTTCGTCGTGGGCACCGCGGCATGGCTTTACATCATCTACGAGATCTTCGCTGGTGAGGCGAGTCGCATTAACGCCACCAATGGGTCGGCCGCTAGTCAGCGGGCCTTCTCCGCTCTGCGCATTATCGTCACGTTC LLTVPLQIIEFYLILAAIAVVRVALFWRLLSASLVMLVFGYAGEIDAMNVWLAFVVGTAAWLYIIYEIFAGEASRINATNGSAASQRAFSALRIIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTTACCGTGCCCCTCCAAATCATCGAGTTCTACCTGATCCTCGCCGCA---------ATT---GCCGTGGTACGCGTT---GCGCTG------------------------------------TTCTGGCGC---CTCCTTAGCGCTTCACTTGTCATGCTGGTGTTCGGCTACGCCGGAGAA---------ATC------------------GAC------GCT---------------------------------ATG------------------------------------------------------------------AACGTC------------------TGGCTCGCC---TTCGTCGTGGGCACCGCGGCATGGCTTTACATCATCTACGAGATC---------------TTC------GCT---GGTGAGGCGAGTCGCATTAACGCCACC------AAT---GGGTCGGCCGCTAGT---CAG---CGG---GCC---TTC---TCC---GCTCTG---CGCATTATCGTCACGTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVRV-AL------------FWR-LLSASLVMLVFGYAGE---I------D--A-----------M----------------------NV------WLA-FVVGTAAWLYIIYEI-----F--A-GEASRINAT--N-GSAAS-Q-R-A-F-S-AL-RIIVTF-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ929861 [unk-Proteo2-Glaciecola] PRGD_OTU312_otuREP_c0b11f98fb77b7162d251952bd3d580e gb|KJ929861| PRGD_OTU312_otuREP_c0b11f98fb77b7162d251952bd3d580e, putative proteorhodopsin gene, partial cds. PRGD_OTU312_otuREP_c0b11f98fb77b7162d251952bd3d580e, putative proteorhodopsin gene, partial cds. KJ929861 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATACTTACTGTGCCACTCCAGATTGTCGAATTCTATCTTGTCCTGGCGGCCATAACCGTAGTGAGGATATCTTTATTCTGGCGTTTGCTGTCTGCTTCACTGGTAATGCTAGTCTTTGGCTATCTAGGGGAAACACAGGTACTAGGGTACTGGACCGCTTTCGGAATTGGCACTGCGGCCTGGCTATACATTATCTACGAGATTTTCGCGGGTGAAGCCAGTCGTATAAACCAGCAGCATGGGACACCTGCAAGCCAGCGGGCCTTTTCAGCTCTGCGAATCATTGTGACTTTT ILTVPLQIVEFYLVLAAITVVRISLFWRLLSASLVMLVFGYLGETQVLGYWTAFGIGTAAWLYIIYEIFAGEASRINQQHGTPASQRAFSALRIIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTTACTGTGCCACTCCAGATTGTCGAATTCTATCTTGTCCTGGCGGCC---------ATA---ACCGTAGTGAGGATA---TCTTTA------------------------------------TTCTGGCGT---TTGCTGTCTGCTTCACTGGTAATGCTAGTCTTTGGCTATCTAGGGGAA---------ACA------------------CAG------GTA---------------------------------------------------------------------------------------------------------------------CTAGGGTACTGGACCGCT---TTCGGAATTGGCACTGCGGCCTGGCTATACATTATCTACGAGATT---------------TTC------GCG---GGTGAAGCCAGTCGTATAAACCAGCAG------CAT---GGGACACCTGCAAGC---CAG---CGG---GCC---TTT---TCA---GCTCTG---CGAATCATTGTGACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLQIVEFYLVLAA---I-TVVRI-SL------------FWR-LLSASLVMLVFGYLGE---T------Q--V---------------------------------------LGYWTA-FGIGTAAWLYIIYEI-----F--A-GEASRINQQ--H-GTPAS-Q-R-A-F-S-AL-RIIVTF-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ929923 [unk-Proteo2-Glaciecola] PRGD_OTU374_otuREP_d3436c311976b2859a34f30f31e6ba85 gb|KJ929923| PRGD_OTU374_otuREP_d3436c311976b2859a34f30f31e6ba85, putative proteorhodopsin gene, partial cds. PRGD_OTU374_otuREP_d3436c311976b2859a34f30f31e6ba85, putative proteorhodopsin gene, partial cds. KJ929923 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTTTTAACCGTACCGCTGCAAATCATCGAGTTTTATTTGATTTTGACTGCCATCGCTGTGGTTAGAGCGGCGTTGTTCTGGAAGCTGCTGGTCGCCTCGATCGTGATGCTGGTCTTCGGTTACCTCGGCGAAATTGGCCAAATGAGTGCCTGGCCTGCCTTCATTATCGGCACCCTTGCTTGGTTATACATCATTTACGAAATATTCTTTGGTGAGGCGAGTAAAATCAATGCCGAGCATGGTACGGCGGCAAGTCAAACAGCGTTTAATGCACTTCGTTGGATCGTAACGATA LLTVPLQIIEFYLILTAIAVVRAALFWKLLVASIVMLVFGYLGEIGQMSAWPAFIIGTLAWLYIIYEIFFGEASKINAEHGTAASQTAFNALRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTAACCGTACCGCTGCAAATCATCGAGTTTTATTTGATTTTGACTGCC---------ATC---GCTGTGGTTAGAGCG---GCGTTG------------------------------------TTCTGGAAG---CTGCTGGTCGCCTCGATCGTGATGCTGGTCTTCGGTTACCTCGGCGAA---------ATT------------------GGC------CAA---------------------------------ATG------------------------------------------------------------------AGTGCC------------------TGGCCTGCC---TTCATTATCGGCACCCTTGCTTGGTTATACATCATTTACGAAATA---------------TTC------TTT---GGTGAGGCGAGTAAAATCAATGCCGAG------CAT---GGTACGGCGGCAAGT---CAA---ACA---GCG---TTT---AAT---GCACTT---CGTTGGATCGTAACGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILTA---I-AVVRA-AL------------FWK-LLVASIVMLVFGYLGE---I------G--Q-----------M----------------------SA------WPA-FIIGTLAWLYIIYEI-----F--F-GEASKINAE--H-GTAAS-Q-T-A-F-N-AL-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ929588 [unk-Proteo2-Glaciecola] PRGD_OTU161_0b61ef7892c3b8a49cf11c77f52c5e42 gb|KJ929588| PRGD_OTU161_0b61ef7892c3b8a49cf11c77f52c5e42, putative proteorhodopsin gene, partial cds. PRGD_OTU161_0b61ef7892c3b8a49cf11c77f52c5e42, putative proteorhodopsin gene, partial cds. KJ929588 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTCTGACAGTGCCGCTCCAAATTGTTGAGTTTTATCTCATTCTTGCGGCCATAGCCACGGTTCGGTCCGCCTTATTTTGGAAGCTTCTCATCGCATCAATTGTGATGTTGGTATTCGGCTACGTCGGAGAGGTGAAGACTCTCAATTACTGGGCTGCGTTCGCGGTCGGAATGGCAGGCTGGATTTACATTATCTATGAAATCTTTGCAGGCGAAGCGAGCAAAATCAGTGCAGAGCAAGGTACAGAGGCGAGCAAGAAAGCTTTCAATGCGCTCCGAATTATCGTGTCCGTC LLTVPLQIVEFYLILAAIATVRSALFWKLLIASIVMLVFGYVGEVKTLNYWAAFAVGMAGWIYIIYEIFAGEASKISAEQGTEASKKAFNALRIIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTGACAGTGCCGCTCCAAATTGTTGAGTTTTATCTCATTCTTGCGGCC---------ATA---GCCACGGTTCGGTCC---GCCTTA------------------------------------TTTTGGAAG---CTTCTCATCGCATCAATTGTGATGTTGGTATTCGGCTACGTCGGAGAG---------GTG------------------AAG------ACT---------------------------------CTC------------------------------------------------------------------AATTAC------------------TGGGCTGCG---TTCGCGGTCGGAATGGCAGGCTGGATTTACATTATCTATGAAATC---------------TTT------GCA---GGCGAAGCGAGCAAAATCAGTGCAGAG------CAA---GGTACAGAGGCGAGC---AAG---AAA---GCT---TTC---AAT---GCGCTC---CGAATTATCGTGTCCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-ATVRS-AL------------FWK-LLIASIVMLVFGYVGE---V------K--T-----------L----------------------NY------WAA-FAVGMAGWIYIIYEI-----F--A-GEASKISAE--Q-GTEAS-K-K-A-F-N-AL-RIIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ929589 [unk-Proteo2-Glaciecola] PRGD_OTU161_d6b0c77bdae2a1b1c7a4e26d1cf5d7bb gb|KJ929589| PRGD_OTU161_d6b0c77bdae2a1b1c7a4e26d1cf5d7bb, putative proteorhodopsin gene, partial cds. PRGD_OTU161_d6b0c77bdae2a1b1c7a4e26d1cf5d7bb, putative proteorhodopsin gene, partial cds. KJ929589 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTCTTACGGTACCGCTACAGATCGTTGAGTTTTATCTCATCCTCGCCGCTATCGCCACAGTTCGCTCGGCACTATTTTGGAAGCTTCTGATTGCGTCGATAGTCATGCTCGTATTCGGTTACGTCGGAGAAGTTAAGACGCTGAATTACTGGGCTGCATTTGCGGTCGGTATGGCGGGCTGGATTTACATCATTTATGAAATCTTCGCTGGCGAGGCGAGCAAAATCAGTGCGGAACAAGGTACCGAAGCGAGCAAAAAGGCTTTCAACGCGCTTCGAATCATAGTTTCAGTC LLTVPLQIVEFYLILAAIATVRSALFWKLLIASIVMLVFGYVGEVKTLNYWAAFAVGMAGWIYIIYEIFAGEASKISAEQGTEASKKAFNALRIIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTTACGGTACCGCTACAGATCGTTGAGTTTTATCTCATCCTCGCCGCT---------ATC---GCCACAGTTCGCTCG---GCACTA------------------------------------TTTTGGAAG---CTTCTGATTGCGTCGATAGTCATGCTCGTATTCGGTTACGTCGGAGAA---------GTT------------------AAG------ACG---------------------------------CTG------------------------------------------------------------------AATTAC------------------TGGGCTGCA---TTTGCGGTCGGTATGGCGGGCTGGATTTACATCATTTATGAAATC---------------TTC------GCT---GGCGAGGCGAGCAAAATCAGTGCGGAA------CAA---GGTACCGAAGCGAGC---AAA---AAG---GCT---TTC---AAC---GCGCTT---CGAATCATAGTTTCAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-ATVRS-AL------------FWK-LLIASIVMLVFGYVGE---V------K--T-----------L----------------------NY------WAA-FAVGMAGWIYIIYEI-----F--A-GEASKISAE--Q-GTEAS-K-K-A-F-N-AL-RIIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ929587 [unk-Proteo2-Glaciecola] PRGD_OTU161_otuREP_8793b1196d22694efded661140f1897b gb|KJ929587| PRGD_OTU161_otuREP_8793b1196d22694efded661140f1897b, putative proteorhodopsin gene, partial cds. PRGD_OTU161_otuREP_8793b1196d22694efded661140f1897b, putative proteorhodopsin gene, partial cds. KJ929587 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTGCTGACCGTACCGCTGCAGATTGTTGAGTTTTATCTAATCCTTGCGGCAATTGCTACGGTTCGTTCCGCGCTATTTTGGAAGCTCCTTATCGCTTCGATTGTGATGCTTGTATTCGGTTATGTCGGCGAAGTGAAGACACTCAACTACTGGGCTGCATTCGCGGTCGGTATGGCAGGCTGGATTTACATCATCTATGAAATCTTCGCTGGTGAGGCGAGCAAAATCAGTGCTGAGCAAGGTACCGAAGCGAGCAAAAAAGCATTCAACGCACTGCGTATCATCGTATCGGTC LLTVPLQIVEFYLILAAIATVRSALFWKLLIASIVMLVFGYVGEVKTLNYWAAFAVGMAGWIYIIYEIFAGEASKISAEQGTEASKKAFNALRIIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTGACCGTACCGCTGCAGATTGTTGAGTTTTATCTAATCCTTGCGGCA---------ATT---GCTACGGTTCGTTCC---GCGCTA------------------------------------TTTTGGAAG---CTCCTTATCGCTTCGATTGTGATGCTTGTATTCGGTTATGTCGGCGAA---------GTG------------------AAG------ACA---------------------------------CTC------------------------------------------------------------------AACTAC------------------TGGGCTGCA---TTCGCGGTCGGTATGGCAGGCTGGATTTACATCATCTATGAAATC---------------TTC------GCT---GGTGAGGCGAGCAAAATCAGTGCTGAG------CAA---GGTACCGAAGCGAGC---AAA---AAA---GCA---TTC---AAC---GCACTG---CGTATCATCGTATCGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-ATVRS-AL------------FWK-LLIASIVMLVFGYVGE---V------K--T-----------L----------------------NY------WAA-FAVGMAGWIYIIYEI-----F--A-GEASKISAE--Q-GTEAS-K-K-A-F-N-AL-RIIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927181 [unk-Proteo2-Glaciecola] PRGD_OTU006_08dfa8528bd714ab11269663e5baf992 gb|KJ927181| PRGD_OTU006_08dfa8528bd714ab11269663e5baf992, putative proteorhodopsin gene, partial cds. PRGD_OTU006_08dfa8528bd714ab11269663e5baf992, putative proteorhodopsin gene, partial cds. KJ927181 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTGCTGACGGTTCCACTTCAGATCGTTGAGTTCTATCTGATTCTTGCGGCTATCGCCGTGGTCAGGGCCGCACTCTTCTGGAAGCTTATGGTTGCTTCCATCGTGATGCTGGTCTTCGGCTACTTCGGTGAACTCGGCGCTATGGACTACTGGATTGCCTTCATCATCGGGATGGCAGGCTGGCTATACATCATCTACGAAATCTTCTTTGGTGAAGCAAGCCAGATCAATGCTGAAAGTGGTACCGCCGCGAGCCAAACGGCTTTCAACGCACTGCGTTGGATTGTGACCGTC LLTVPLQIVEFYLILAAIAVVRAALFWKLMVASIVMLVFGYFGELGAMDYWIAFIIGMAGWLYIIYEIFFGEASQINAESGTAASQTAFNALRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTGACGGTTCCACTTCAGATCGTTGAGTTCTATCTGATTCTTGCGGCT---------ATC---GCCGTGGTCAGGGCC---GCACTC------------------------------------TTCTGGAAG---CTTATGGTTGCTTCCATCGTGATGCTGGTCTTCGGCTACTTCGGTGAA---------CTC------------------GGC------GCT---------------------------------ATG------------------------------------------------------------------GACTAC------------------TGGATTGCC---TTCATCATCGGGATGGCAGGCTGGCTATACATCATCTACGAAATC---------------TTC------TTT---GGTGAAGCAAGCCAGATCAATGCTGAA------AGT---GGTACCGCCGCGAGC---CAA---ACG---GCT---TTC---AAC---GCACTG---CGTTGGATTGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LMVASIVMLVFGYFGE---L------G--A-----------M----------------------DY------WIA-FIIGMAGWLYIIYEI-----F--F-GEASQINAE--S-GTAAS-Q-T-A-F-N-AL-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927184 [unk-Proteo2-Glaciecola] PRGD_OTU006_1b8eedb900328a50fe168a30e2a61049 gb|KJ927184| PRGD_OTU006_1b8eedb900328a50fe168a30e2a61049, putative proteorhodopsin gene, partial cds. PRGD_OTU006_1b8eedb900328a50fe168a30e2a61049, putative proteorhodopsin gene, partial cds. KJ927184 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGCTCACAGTGCCACTGCAAATCGTCGAGTTTTACTTGATTCTTGCAGCTATCGCTGTTGTTCGTGCTGCCTTGTTCTGGAAGCTATTGATCGCGTCACTTGTGATGTTGGTCTTTGGTTATCTGGGTGAAGTCGGTGCCATGGATTACTGGATTGCGTTCATCATCGGCATGGCCGGATGGTTGTACATCATCTATGAAATCTTCATGGGTGAAGCCAGTCAGATCAGTGCCGCTCACGGTACTGCTGCAAGCCAAAGCGCATTCAACGCTTTGCGTCTGATCGTAACCGTT LLTVPLQIVEFYLILAAIAVVRAALFWKLLIASLVMLVFGYLGEVGAMDYWIAFIIGMAGWLYIIYEIFMGEASQISAAHGTAASQSAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTCACAGTGCCACTGCAAATCGTCGAGTTTTACTTGATTCTTGCAGCT---------ATC---GCTGTTGTTCGTGCT---GCCTTG------------------------------------TTCTGGAAG---CTATTGATCGCGTCACTTGTGATGTTGGTCTTTGGTTATCTGGGTGAA---------GTC------------------GGT------GCC---------------------------------ATG------------------------------------------------------------------GATTAC------------------TGGATTGCG---TTCATCATCGGCATGGCCGGATGGTTGTACATCATCTATGAAATC---------------TTC------ATG---GGTGAAGCCAGTCAGATCAGTGCCGCT------CAC---GGTACTGCTGCAAGC---CAA---AGC---GCA---TTC---AAC---GCTTTG---CGTCTGATCGTAACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LLIASLVMLVFGYLGE---V------G--A-----------M----------------------DY------WIA-FIIGMAGWLYIIYEI-----F--M-GEASQISAA--H-GTAAS-Q-S-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927239 [unk-Proteo2-Glaciecola] PRGD_OTU006_dd497a1e743f30b00d73ed000aa7df35 gb|KJ927239| PRGD_OTU006_dd497a1e743f30b00d73ed000aa7df35, putative proteorhodopsin gene, partial cds. PRGD_OTU006_dd497a1e743f30b00d73ed000aa7df35, putative proteorhodopsin gene, partial cds. KJ927239 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683) TTGCTCACAGTGCCACTGCAAATCGTCGAGTTTTACTTGATTCTTGCAGCCATCGCTGTTGTTCGCGCTGCCTTGTTCTGGAAGCTATTGATTGCGTCACTCGTGATGTTGGTCTTTGGCTATCTAGGTGAAGTCGGTGCCATGGATTACTGGATTGCGTTCATCATCGGCATGGCCGGATGGTTGTACATCATCTATGAAATCTTCATGGGTGAAGCGAGCCAGATCAGTGCCGCCCACGGTACTGCTGCAAGCCAAAGCGCATTCAACGCTTTGCGCCTGATCGTAACCGTT LLTVPLQIVEFYLILAAIAVVRAALFWKLLIASLVMLVFGYLGEVGAMDYWIAFIIGMAGWLYIIYEIFMGEASQISAAHGTAASQSAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTCACAGTGCCACTGCAAATCGTCGAGTTTTACTTGATTCTTGCAGCC---------ATC---GCTGTTGTTCGCGCT---GCCTTG------------------------------------TTCTGGAAG---CTATTGATTGCGTCACTCGTGATGTTGGTCTTTGGCTATCTAGGTGAA---------GTC------------------GGT------GCC---------------------------------ATG------------------------------------------------------------------GATTAC------------------TGGATTGCG---TTCATCATCGGCATGGCCGGATGGTTGTACATCATCTATGAAATC---------------TTC------ATG---GGTGAAGCGAGCCAGATCAGTGCCGCC------CAC---GGTACTGCTGCAAGC---CAA---AGC---GCA---TTC---AAC---GCTTTG---CGCCTGATCGTAACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LLIASLVMLVFGYLGE---V------G--A-----------M----------------------DY------WIA-FIIGMAGWLYIIYEI-----F--M-GEASQISAA--H-GTAAS-Q-S-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927208 [unk-Proteo2-Glaciecola] PRGD_OTU006_7c103d5d7ccf51e7f8df6474273cf369 gb|KJ927208| PRGD_OTU006_7c103d5d7ccf51e7f8df6474273cf369, putative proteorhodopsin gene, partial cds. PRGD_OTU006_7c103d5d7ccf51e7f8df6474273cf369, putative proteorhodopsin gene, partial cds. KJ927208 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -33.9602, -73.3769), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) CTGTTAACCGTACCCCTGCAGATCGTCGAGTTTTACTTGATTCTCGCAGCCATCGCCGTGGTTCGCGCCGCGTTGTTCTGGAAGCTTATGATCGGCTCACTCGTGATGCTGATATTTGGCTACCTGGGTGAAGTTGGTGCCATGGACTACTGGATTGCCTTCATCATCGGGATGGCAGGCTGGTTGTATATCATCTATGAGATCTTCATCGGTGAAGCTAGCCAAATCAGTGCCTCTCAAGGTACTGCCGCAAGCCAAGCTGCGTTCAACGCACTACGCATCATCGTAACCGTT LLTVPLQIVEFYLILAAIAVVRAALFWKLMIGSLVMLIFGYLGEVGAMDYWIAFIIGMAGWLYIIYEIFIGEASQISASQGTAASQAAFNALRIIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACCGTACCCCTGCAGATCGTCGAGTTTTACTTGATTCTCGCAGCC---------ATC---GCCGTGGTTCGCGCC---GCGTTG------------------------------------TTCTGGAAG---CTTATGATCGGCTCACTCGTGATGCTGATATTTGGCTACCTGGGTGAA---------GTT------------------GGT------GCC---------------------------------ATG------------------------------------------------------------------GACTAC------------------TGGATTGCC---TTCATCATCGGGATGGCAGGCTGGTTGTATATCATCTATGAGATC---------------TTC------ATC---GGTGAAGCTAGCCAAATCAGTGCCTCT------CAA---GGTACTGCCGCAAGC---CAA---GCT---GCG---TTC---AAC---GCACTA---CGCATCATCGTAACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LMIGSLVMLIFGYLGE---V------G--A-----------M----------------------DY------WIA-FIIGMAGWLYIIYEI-----F--I-GEASQISAS--Q-GTAAS-Q-A-A-F-N-AL-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927233 [unk-Proteo2-Glaciecola] PRGD_OTU006_c81ae3a225b006199447967e17743ab9 gb|KJ927233| PRGD_OTU006_c81ae3a225b006199447967e17743ab9, putative proteorhodopsin gene, partial cds. PRGD_OTU006_c81ae3a225b006199447967e17743ab9, putative proteorhodopsin gene, partial cds. KJ927233 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTATTAACCGTACCCCTGCAGATCGTCGAGTTTTACTTGATTCTTGCAGCCATCGCCGTGGTTCGCGCCGCGTTGTTCTGGAAGCTTTTGATCGGCTCACTCGTGATGCTGGTATTTGGCTACCTTGGTGAAGTCGGTGCCATGGACTACTGGATTGCCTTCATCATCGGGATGGCAGGCTGGTTGTATATCATCTATGAGATCTTCATCGGTGAAGCTAGTCAGATCAGTGCCTCTCAAGGCACTGCCGCAAGCCAAGCTGCGTTCAACGCACTACGTATCATCGTAACCGTT LLTVPLQIVEFYLILAAIAVVRAALFWKLLIGSLVMLVFGYLGEVGAMDYWIAFIIGMAGWLYIIYEIFIGEASQISASQGTAASQAAFNALRIIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACCGTACCCCTGCAGATCGTCGAGTTTTACTTGATTCTTGCAGCC---------ATC---GCCGTGGTTCGCGCC---GCGTTG------------------------------------TTCTGGAAG---CTTTTGATCGGCTCACTCGTGATGCTGGTATTTGGCTACCTTGGTGAA---------GTC------------------GGT------GCC---------------------------------ATG------------------------------------------------------------------GACTAC------------------TGGATTGCC---TTCATCATCGGGATGGCAGGCTGGTTGTATATCATCTATGAGATC---------------TTC------ATC---GGTGAAGCTAGTCAGATCAGTGCCTCT------CAA---GGCACTGCCGCAAGC---CAA---GCT---GCG---TTC---AAC---GCACTA---CGTATCATCGTAACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LLIGSLVMLVFGYLGE---V------G--A-----------M----------------------DY------WIA-FIIGMAGWLYIIYEI-----F--I-GEASQISAS--Q-GTAAS-Q-A-A-F-N-AL-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927179 [unk-Proteo2-Glaciecola] PRGD_OTU006_04bfa7d15a4a389fa8c6a8a7c65b5b70 gb|KJ927179| PRGD_OTU006_04bfa7d15a4a389fa8c6a8a7c65b5b70, putative proteorhodopsin gene, partial cds. PRGD_OTU006_04bfa7d15a4a389fa8c6a8a7c65b5b70, putative proteorhodopsin gene, partial cds. KJ927179 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) TTGTTGACCGTACCGCTGCAGATCGTCGAGTTTTACTTGATTCTCGCGGCCATTGCAGTTGTTCGCGCAGCCTTGTTCTGGAAGCTTTTGATCGCATCACTTGTGATGTTGGTTTTTGGCTACTTGGGCGAAGTAGGCGCAATGGACTACTGGATTGCATTCATCATCGGCATGGCCGGATGGTTGTACATCATCTATGAAATTTTCATGGGTGAAGCCAGCCAGATCAGTGCATCTCAGGGTACCGCTGCTAGCCAAGCTGCATTCAACGCACTGCGTTTGATCGTTACCGTT LLTVPLQIVEFYLILAAIAVVRAALFWKLLIASLVMLVFGYLGEVGAMDYWIAFIIGMAGWLYIIYEIFMGEASQISASQGTAASQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTGACCGTACCGCTGCAGATCGTCGAGTTTTACTTGATTCTCGCGGCC---------ATT---GCAGTTGTTCGCGCA---GCCTTG------------------------------------TTCTGGAAG---CTTTTGATCGCATCACTTGTGATGTTGGTTTTTGGCTACTTGGGCGAA---------GTA------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------GACTAC------------------TGGATTGCA---TTCATCATCGGCATGGCCGGATGGTTGTACATCATCTATGAAATT---------------TTC------ATG---GGTGAAGCCAGCCAGATCAGTGCATCT------CAG---GGTACCGCTGCTAGC---CAA---GCT---GCA---TTC---AAC---GCACTG---CGTTTGATCGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LLIASLVMLVFGYLGE---V------G--A-----------M----------------------DY------WIA-FIIGMAGWLYIIYEI-----F--M-GEASQISAS--Q-GTAAS-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927242 [unk-Proteo2-Glaciecola] PRGD_OTU006_e6b9675cb99f38ca02fb27c465892127 gb|KJ927242| PRGD_OTU006_e6b9675cb99f38ca02fb27c465892127, putative proteorhodopsin gene, partial cds. PRGD_OTU006_e6b9675cb99f38ca02fb27c465892127, putative proteorhodopsin gene, partial cds. KJ927242 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-33.28, 45.35) TTGTTGACCGTGCCGCTGCAGATCGTCGAGTTTTACTTGATTCTCGCGGCCATTGCAGTTGTTCGTGCAGCCTTGTTCTGGAAGCTTCTGATCGCATCACTTGTGATGTTGATTTTTGGTTACATGGGCGAAATAGGCGCGATGGACTACTGGATTGCATTCATCATCGGCATGGCCGGATGGTTGTACATCATCTATGAGATCTTCATGGGTGAAGCCAGCCAGATCAGTGCATCTCAGGGTACAGCCGCAAGCCAAGCTGCATTCAACGCCCTGCGTTTGATCGTTACCGTT LLTVPLQIVEFYLILAAIAVVRAALFWKLLIASLVMLIFGYMGEIGAMDYWIAFIIGMAGWLYIIYEIFMGEASQISASQGTAASQAAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTGACCGTGCCGCTGCAGATCGTCGAGTTTTACTTGATTCTCGCGGCC---------ATT---GCAGTTGTTCGTGCA---GCCTTG------------------------------------TTCTGGAAG---CTTCTGATCGCATCACTTGTGATGTTGATTTTTGGTTACATGGGCGAA---------ATA------------------GGC------GCG---------------------------------ATG------------------------------------------------------------------GACTAC------------------TGGATTGCA---TTCATCATCGGCATGGCCGGATGGTTGTACATCATCTATGAGATC---------------TTC------ATG---GGTGAAGCCAGCCAGATCAGTGCATCT------CAG---GGTACAGCCGCAAGC---CAA---GCT---GCA---TTC---AAC---GCCCTG---CGTTTGATCGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LLIASLVMLIFGYMGE---I------G--A-----------M----------------------DY------WIA-FIIGMAGWLYIIYEI-----F--M-GEASQISAS--Q-GTAAS-Q-A-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927234 [unk-Proteo2-Glaciecola] PRGD_OTU006_cf90c11cc60c349e597d939535d9158d gb|KJ927234| PRGD_OTU006_cf90c11cc60c349e597d939535d9158d, putative proteorhodopsin gene, partial cds. PRGD_OTU006_cf90c11cc60c349e597d939535d9158d, putative proteorhodopsin gene, partial cds. KJ927234 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTACTGACCGTGCCACTGCAGATTGTGGAGTTCTACCTGATTCTTGCGGCAATCGCAGTAGTGCGCGCAGCACTTTTCTGGAAGCTAATGATAGCGTCACTTGTGATGCTGATCTTTGGCTATTTGGGAGAAGTGGGCGCAATGGACTACTGGATAGCGTTCATAATCGGTATGGCTGGTTGGTTGTACATCATCTATGAAATATTCATTGGTGAAGCTAGCCAAATCAGCGCGTCCCAAGGAACAGTAGCAAGCCAAACAGCTTTCAACGCATTGCGTTTGATTGTGACTGTA LLTVPLQIVEFYLILAAIAVVRAALFWKLMIASLVMLIFGYLGEVGAMDYWIAFIIGMAGWLYIIYEIFIGEASQISASQGTVASQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTGACCGTGCCACTGCAGATTGTGGAGTTCTACCTGATTCTTGCGGCA---------ATC---GCAGTAGTGCGCGCA---GCACTT------------------------------------TTCTGGAAG---CTAATGATAGCGTCACTTGTGATGCTGATCTTTGGCTATTTGGGAGAA---------GTG------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------GACTAC------------------TGGATAGCG---TTCATAATCGGTATGGCTGGTTGGTTGTACATCATCTATGAAATA---------------TTC------ATT---GGTGAAGCTAGCCAAATCAGCGCGTCC------CAA---GGAACAGTAGCAAGC---CAA---ACA---GCT---TTC---AAC---GCATTG---CGTTTGATTGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLIFGYLGE---V------G--A-----------M----------------------DY------WIA-FIIGMAGWLYIIYEI-----F--I-GEASQISAS--Q-GTVAS-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927212 [unk-Proteo2-Glaciecola] PRGD_OTU006_86765d6f3220dea444318da6c0b01638 gb|KJ927212| PRGD_OTU006_86765d6f3220dea444318da6c0b01638, putative proteorhodopsin gene, partial cds. PRGD_OTU006_86765d6f3220dea444318da6c0b01638, putative proteorhodopsin gene, partial cds. KJ927212 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTACTCACCGTGCCACTGCAGATTGTGGAGTTCTACTTGATTCTTGCAGCTATTGCTGTCGTTCGCGCGGCGCTATTTTGGAAGCTCATGATCGCGTCACTCGTGATGTTGATCTTTGGCTATCTTGGCGAAGTGGGCGCAATGGACTACTGGATCGCGTTCATCATCGGTATGGCAGGTTGGTTGTACATCATCTATGAAATATTCATTGGTGAAGCTAGCCAAATCAGCGCGTCTCAAGGCACCGCTGCGAGCCAAAGTGCATTCAACGCATTGCGTTTGATTGTGACTGTA LLTVPLQIVEFYLILAAIAVVRAALFWKLMIASLVMLIFGYLGEVGAMDYWIAFIIGMAGWLYIIYEIFIGEASQISASQGTAASQSAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTCACCGTGCCACTGCAGATTGTGGAGTTCTACTTGATTCTTGCAGCT---------ATT---GCTGTCGTTCGCGCG---GCGCTA------------------------------------TTTTGGAAG---CTCATGATCGCGTCACTCGTGATGTTGATCTTTGGCTATCTTGGCGAA---------GTG------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------GACTAC------------------TGGATCGCG---TTCATCATCGGTATGGCAGGTTGGTTGTACATCATCTATGAAATA---------------TTC------ATT---GGTGAAGCTAGCCAAATCAGCGCGTCT------CAA---GGCACCGCTGCGAGC---CAA---AGT---GCA---TTC---AAC---GCATTG---CGTTTGATTGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LMIASLVMLIFGYLGE---V------G--A-----------M----------------------DY------WIA-FIIGMAGWLYIIYEI-----F--I-GEASQISAS--Q-GTAAS-Q-S-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927207 [unk-Proteo2-Glaciecola] PRGD_OTU006_75f80fe66fc575d49416b160eceb9f15 gb|KJ927207| PRGD_OTU006_75f80fe66fc575d49416b160eceb9f15, putative proteorhodopsin gene, partial cds. PRGD_OTU006_75f80fe66fc575d49416b160eceb9f15, putative proteorhodopsin gene, partial cds. KJ927207 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) CTACTGACTGTGCCACTGCAGATTGTCGAGTTCTACTTGATTCTTGCAGCGATCGCTGTGGTTCGGGCTGCTCTTTTCTGGAAGCTACTGATTGCGTCTCTCGTGATGCTAATCTTTGGTTATCTTGGAGAAGTCGGTGCGATGGACTATTGGGTAGCGTTCATCATAGGTATGGCCGGTTGGTTGTATATCATCTATGAGATCTTCATTGGTGAAGCAAGCCAAATAAGCGCATCCCAAGGCACTGCTGCTAGCCAAACCGCTTTTAACGCACTAAGAATAATCGTAACTGTA LLTVPLQIVEFYLILAAIAVVRAALFWKLLIASLVMLIFGYLGEVGAMDYWVAFIIGMAGWLYIIYEIFIGEASQISASQGTAASQTAFNALRIIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTGACTGTGCCACTGCAGATTGTCGAGTTCTACTTGATTCTTGCAGCG---------ATC---GCTGTGGTTCGGGCT---GCTCTT------------------------------------TTCTGGAAG---CTACTGATTGCGTCTCTCGTGATGCTAATCTTTGGTTATCTTGGAGAA---------GTC------------------GGT------GCG---------------------------------ATG------------------------------------------------------------------GACTAT------------------TGGGTAGCG---TTCATCATAGGTATGGCCGGTTGGTTGTATATCATCTATGAGATC---------------TTC------ATT---GGTGAAGCAAGCCAAATAAGCGCATCC------CAA---GGCACTGCTGCTAGC---CAA---ACC---GCT---TTT---AAC---GCACTA---AGAATAATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LLIASLVMLIFGYLGE---V------G--A-----------M----------------------DY------WVA-FIIGMAGWLYIIYEI-----F--I-GEASQISAS--Q-GTAAS-Q-T-A-F-N-AL-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ927218 [unk-Proteo2-Glaciecola] PRGD_OTU006_970e79205a7f7c44f7ca55016cd43cae gb|KJ927218| PRGD_OTU006_970e79205a7f7c44f7ca55016cd43cae, putative proteorhodopsin gene, partial cds. PRGD_OTU006_970e79205a7f7c44f7ca55016cd43cae, putative proteorhodopsin gene, partial cds. KJ927218 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -33.9602, -73.3769), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) CTACTGACTGTGCCACTGCAGATTGTCGAGTTCTACTTGATTCTTGCAGCTATCGCTGTGGTTCGGGCTGCTCTTTTCTGGAAGCTACTGATTGCGTCTCTCGTGATGCTAATCTTCGGTTATCTTGGAGAAGTCGGTGCGATGGACTACTGGGTCGCGTTCATCATAGGTATGGCCGGTTGGTTGTATATCATCTATGAGATCTTCATTGGTGAAGCAAGCCAAATAAGCGCATCCCAAGGCACTGCTGCCAGCCAAACGGCTTTTAACGCACTAAGAATAATCGTAACTGTA LLTVPLQIVEFYLILAAIAVVRAALFWKLLIASLVMLIFGYLGEVGAMDYWVAFIIGMAGWLYIIYEIFIGEASQISASQGTAASQTAFNALRIIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTGACTGTGCCACTGCAGATTGTCGAGTTCTACTTGATTCTTGCAGCT---------ATC---GCTGTGGTTCGGGCT---GCTCTT------------------------------------TTCTGGAAG---CTACTGATTGCGTCTCTCGTGATGCTAATCTTCGGTTATCTTGGAGAA---------GTC------------------GGT------GCG---------------------------------ATG------------------------------------------------------------------GACTAC------------------TGGGTCGCG---TTCATCATAGGTATGGCCGGTTGGTTGTATATCATCTATGAGATC---------------TTC------ATT---GGTGAAGCAAGCCAAATAAGCGCATCC------CAA---GGCACTGCTGCCAGC---CAA---ACG---GCT---TTT---AAC---GCACTA---AGAATAATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LLIASLVMLIFGYLGE---V------G--A-----------M----------------------DY------WVA-FIIGMAGWLYIIYEI-----F--I-GEASQISAS--Q-GTAAS-Q-T-A-F-N-AL-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ929265 [unk-Proteo2-Glaciecola] PRGD_OTU095_1315c3e65c43993fb70fad6daf3d7991 gb|KJ929265| PRGD_OTU095_1315c3e65c43993fb70fad6daf3d7991, putative proteorhodopsin gene, partial cds. PRGD_OTU095_1315c3e65c43993fb70fad6daf3d7991, putative proteorhodopsin gene, partial cds. KJ929265 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185; 67.49, -168.12), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTATTGACTGTGCCGCTGCAGATTGTCGAGTTCTACTTGATTCTTGCTGCTATAGCTGTGGTTCGTGCTGCTTTGTTCTGGAAGCTACTGATTGCATCGGTTGTAATGCTAGTCGGCGGATATCTTGGAGAAATCGAAGCTATGCCTTACTGGACAGCATTCGGGATCGGTATGGCTGGTTGGTTGTACATCATCTATGAAGTATTCGTCGGTGAAGCTAGCCAAATCAGCGCATCTCAGGGTACTGAGGCCAGCAAAATCGCCTTCAACGCACTACGCTTGATTGTGACCGTT LLTVPLQIVEFYLILAAIAVVRAALFWKLLIASVVMLVGGYLGEIEAMPYWTAFGIGMAGWLYIIYEVFVGEASQISASQGTEASKIAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTGACTGTGCCGCTGCAGATTGTCGAGTTCTACTTGATTCTTGCTGCT---------ATA---GCTGTGGTTCGTGCT---GCTTTG------------------------------------TTCTGGAAG---CTACTGATTGCATCGGTTGTAATGCTAGTCGGCGGATATCTTGGAGAA---------ATC------------------GAA------GCT---------------------------------ATG------------------------------------------------------------------CCTTAC------------------TGGACAGCA---TTCGGGATCGGTATGGCTGGTTGGTTGTACATCATCTATGAAGTA---------------TTC------GTC---GGTGAAGCTAGCCAAATCAGCGCATCT------CAG---GGTACTGAGGCCAGC---AAA---ATC---GCC---TTC---AAC---GCACTA---CGCTTGATTGTGACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LLIASVVMLVGGYLGE---I------E--A-----------M----------------------PY------WTA-FGIGMAGWLYIIYEV-----F--V-GEASQISAS--Q-GTEAS-K-I-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ929266 [unk-Proteo2-Glaciecola] PRGD_OTU095_2b3136de32c4e636d2b68ef3ba38251a gb|KJ929266| PRGD_OTU095_2b3136de32c4e636d2b68ef3ba38251a, putative proteorhodopsin gene, partial cds. PRGD_OTU095_2b3136de32c4e636d2b68ef3ba38251a, putative proteorhodopsin gene, partial cds. KJ929266 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12) TTATTGACTGTGCCACTGCAGATTGTCGAGTTCTACTTGATTCTTGCTGCTATAGCCGTAGTTCGTGCTGCTTTGTTCTGGAAGCTGCTGGTTGCATCAGTTGTGATGCTAGTCGGCGGATATCTTGGAGAAATCAGCGCTCTGCCTTACTGGATAGCATTCGCGATCGGTATGGCTGGATGGTTGTACATCATCTATGAAATATTCATCGGTGAAGCTAGTCAAATCAGCGCATCTCAGGGTACTGAGGCCAGCAAAATCGCCTTCAACGCACTACGCTTGATTGTGACCGTT LLTVPLQIVEFYLILAAIAVVRAALFWKLLVASVVMLVGGYLGEISALPYWIAFAIGMAGWLYIIYEIFIGEASQISASQGTEASKIAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTGACTGTGCCACTGCAGATTGTCGAGTTCTACTTGATTCTTGCTGCT---------ATA---GCCGTAGTTCGTGCT---GCTTTG------------------------------------TTCTGGAAG---CTGCTGGTTGCATCAGTTGTGATGCTAGTCGGCGGATATCTTGGAGAA---------ATC------------------AGC------GCT---------------------------------CTG------------------------------------------------------------------CCTTAC------------------TGGATAGCA---TTCGCGATCGGTATGGCTGGATGGTTGTACATCATCTATGAAATA---------------TTC------ATC---GGTGAAGCTAGTCAAATCAGCGCATCT------CAG---GGTACTGAGGCCAGC---AAA---ATC---GCC---TTC---AAC---GCACTA---CGCTTGATTGTGACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LLVASVVMLVGGYLGE---I------S--A-----------L----------------------PY------WIA-FAIGMAGWLYIIYEI-----F--I-GEASQISAS--Q-GTEAS-K-I-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ929262 [unk-Proteo2-Glaciecola] PRGD_OTU095_otuREP_7ab61e7c8511880b2e9814ff7d883940 gb|KJ929262| PRGD_OTU095_otuREP_7ab61e7c8511880b2e9814ff7d883940, putative proteorhodopsin gene, partial cds. PRGD_OTU095_otuREP_7ab61e7c8511880b2e9814ff7d883940, putative proteorhodopsin gene, partial cds. KJ929262 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (67.49, -168.12), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73) TTGTTAACTGTACCACTGCAAATTGTCGAGTTCTACTTGATTCTTGCTGCTATAGCTGTAGTTCGTGCTGCTTTGTTCTGGAAACTGTTGATTGCATCAGTTGTGATGCTAGTCGGCGGATATCTTGGAGAAATCGGAGCTATGTCTTACTGGCCTGCATTCGCTATCGGTATGGCTGGATGGCTATATATCATCTACGAAGTATTCGTTGGTGAAGCAAGTCAAATCAGCGCATCTCAGGGTACTGAGGCCAGCAAAATCGCCTTCAACGCATTACGTTTGATTGTGACTGTT LLTVPLQIVEFYLILAAIAVVRAALFWKLLIASVVMLVGGYLGEIGAMSYWPAFAIGMAGWLYIIYEVFVGEASQISASQGTEASKIAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTAACTGTACCACTGCAAATTGTCGAGTTCTACTTGATTCTTGCTGCT---------ATA---GCTGTAGTTCGTGCT---GCTTTG------------------------------------TTCTGGAAA---CTGTTGATTGCATCAGTTGTGATGCTAGTCGGCGGATATCTTGGAGAA---------ATC------------------GGA------GCT---------------------------------ATG------------------------------------------------------------------TCTTAC------------------TGGCCTGCA---TTCGCTATCGGTATGGCTGGATGGCTATATATCATCTACGAAGTA---------------TTC------GTT---GGTGAAGCAAGTCAAATCAGCGCATCT------CAG---GGTACTGAGGCCAGC---AAA---ATC---GCC---TTC---AAC---GCATTA---CGTTTGATTGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LLIASVVMLVGGYLGE---I------G--A-----------M----------------------SY------WPA-FAIGMAGWLYIIYEV-----F--V-GEASQISAS--Q-GTEAS-K-I-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ929268 [unk-Proteo2-Glaciecola] PRGD_OTU095_e56bd80183c0f7c49a304e70454f4966 gb|KJ929268| PRGD_OTU095_e56bd80183c0f7c49a304e70454f4966, putative proteorhodopsin gene, partial cds. PRGD_OTU095_e56bd80183c0f7c49a304e70454f4966, putative proteorhodopsin gene, partial cds. KJ929268 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12) TTATTGACTGTGCCACTGCAGATTGTCGAGTTCTTCTTGATTCTTTCTGCTATAGCTGTAGTTCGTGCTGCTTTGTTCTGGAAGCTACTGGTTGCATCGGTTGTGATGCTAGTCGGTGGGTATCTTGGAGAAGTTGGAGCAATGAATATCTGGCTTGGATTCGCCATCGGTATGGCTGGTTGGATCTATATCATCTACGAGATATTCCTAGGTGAAGCTAGCGAAATCAGCGCGTCTCAAGGTACTGAAGCAAGTAAAACTGCCTTCAACGCACTACGCTTGATTGTGACTGTT LLTVPLQIVEFFLILSAIAVVRAALFWKLLVASVVMLVGGYLGEVGAMNIWLGFAIGMAGWIYIIYEIFLGEASEISASQGTEASKTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTGACTGTGCCACTGCAGATTGTCGAGTTCTTCTTGATTCTTTCTGCT---------ATA---GCTGTAGTTCGTGCT---GCTTTG------------------------------------TTCTGGAAG---CTACTGGTTGCATCGGTTGTGATGCTAGTCGGTGGGTATCTTGGAGAA---------GTT------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------AATATC------------------TGGCTTGGA---TTCGCCATCGGTATGGCTGGTTGGATCTATATCATCTACGAGATA---------------TTC------CTA---GGTGAAGCTAGCGAAATCAGCGCGTCT------CAA---GGTACTGAAGCAAGT---AAA---ACT---GCC---TTC---AAC---GCACTA---CGCTTGATTGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFFLILSA---I-AVVRA-AL------------FWK-LLVASVVMLVGGYLGE---V------G--A-----------M----------------------NI------WLG-FAIGMAGWIYIIYEI-----F--L-GEASEISAS--Q-GTEAS-K-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ929267 [unk-Proteo2-Glaciecola] PRGD_OTU095_62959b63e176d195204f71a5cdaf0ccb gb|KJ929267| PRGD_OTU095_62959b63e176d195204f71a5cdaf0ccb, putative proteorhodopsin gene, partial cds. PRGD_OTU095_62959b63e176d195204f71a5cdaf0ccb, putative proteorhodopsin gene, partial cds. KJ929267 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185; 67.49, -168.12) TTATTAACTGTGCCACTGCAGATTGTTGAGTTCTTCTTGATCCTCACTGCGGTAGCTGTAGTTCGTGCTGCTTTGTTCTGGAAGTTACTGGTTGCATCAGTTGTGATGCTTGTCGGTGGTTACCTTGGTGAAATTGGCGCTATGGATTATAATCTTGGATTTGCTATTGGTATGGCTGGTTGGTTATATATCATCTATGAGATTTTCGTTGGTGAAGCTAGTAAAATCAGTGCATCTCAGGGAACTGAAGCCAGTAAAATAGCCTTCAATGCACTTCGCTTAATTGTAACTATT LLTVPLQIVEFFLILTAVAVVRAALFWKLLVASVVMLVGGYLGEIGAMDYNLGFAIGMAGWLYIIYEIFVGEASKISASQGTEASKIAFNALRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACTGTGCCACTGCAGATTGTTGAGTTCTTCTTGATCCTCACTGCG---------GTA---GCTGTAGTTCGTGCT---GCTTTG------------------------------------TTCTGGAAG---TTACTGGTTGCATCAGTTGTGATGCTTGTCGGTGGTTACCTTGGTGAA---------ATT------------------GGC------GCT---------------------------------ATG------------------------------------------------------------------GATTAT------------------AATCTTGGA---TTTGCTATTGGTATGGCTGGTTGGTTATATATCATCTATGAGATT---------------TTC------GTT---GGTGAAGCTAGTAAAATCAGTGCATCT------CAG---GGAACTGAAGCCAGT---AAA---ATA---GCC---TTC---AAT---GCACTT---CGCTTAATTGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFFLILTA---V-AVVRA-AL------------FWK-LLVASVVMLVGGYLGE---I------G--A-----------M----------------------DY------NLG-FAIGMAGWLYIIYEI-----F--V-GEASKISAS--Q-GTEAS-K-I-A-F-N-AL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ929263 [unk-Proteo2-Glaciecola] PRGD_OTU095_05cab4d024bf2825f0d0553e6178e2c4 gb|KJ929263| PRGD_OTU095_05cab4d024bf2825f0d0553e6178e2c4, putative proteorhodopsin gene, partial cds. PRGD_OTU095_05cab4d024bf2825f0d0553e6178e2c4, putative proteorhodopsin gene, partial cds. KJ929263 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTATTAACTGTTCCACTGCAGATTGTCGAGTTTTTCTTGATTCTTTCTGCTATAGCTGTGGTTCGTGCTGCTTTGTTCTGGAAGCTGTTAATTGCATCCGTTGTGATGTTAGTTGGCGGATATCTCGGGGAAGTTGGAGCTATGTCTTATTGGCCAGCATTCGCAATTGGTATGGCTGGGTGGATATACATTATCTACGAAATCTTCGTTGGTGTAGCTAGTCAAATCAGTGCAGCCCAGGGTACTGAAGCGAGTAAAACTGCCTTCAATGCACTACGTTTGATTGTAACTGTT LLTVPLQIVEFFLILSAIAVVRAALFWKLLIASVVMLVGGYLGEVGAMSYWPAFAIGMAGWIYIIYEIFVGVASQISAAQGTEASKTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACTGTTCCACTGCAGATTGTCGAGTTTTTCTTGATTCTTTCTGCT---------ATA---GCTGTGGTTCGTGCT---GCTTTG------------------------------------TTCTGGAAG---CTGTTAATTGCATCCGTTGTGATGTTAGTTGGCGGATATCTCGGGGAA---------GTT------------------GGA------GCT---------------------------------ATG------------------------------------------------------------------TCTTAT------------------TGGCCAGCA---TTCGCAATTGGTATGGCTGGGTGGATATACATTATCTACGAAATC---------------TTC------GTT---GGTGTAGCTAGTCAAATCAGTGCAGCC------CAG---GGTACTGAAGCGAGT---AAA---ACT---GCC---TTC---AAT---GCACTA---CGTTTGATTGTAACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFFLILSA---I-AVVRA-AL------------FWK-LLIASVVMLVGGYLGE---V------G--A-----------M----------------------SY------WPA-FAIGMAGWIYIIYEI-----F--V-GVASQISAA--Q-GTEAS-K-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Glaciecola]_KJ929264 [unk-Proteo2-Glaciecola] PRGD_OTU095_125c34ec8634d560b968eb514cd28046 gb|KJ929264| PRGD_OTU095_125c34ec8634d560b968eb514cd28046, putative proteorhodopsin gene, partial cds. PRGD_OTU095_125c34ec8634d560b968eb514cd28046, putative proteorhodopsin gene, partial cds. KJ929264 [[proteorhodopsin/Proteobacterial-like cluster 2/Glaciecola Gammapreoteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Glaciecola Gammapreoteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTGTTAACTGTGCCACTGCAGATTGTCGAGTTTTTCTTGATTCTTTCTGCTATAGCTGTAGTTCGTGCTGCTTTGTTCTGGAAGCTGTTAATTGCATCCGTTGTGATGCTAGTTGGCGGTTATCTCGGGGAAGTTGGAGCTATGTCCTATTGGCCAGCGTTCGCAATTGGTATGGCTGGGTGGATATACATTATCTACGAAATCTTCGTTGGTGAAGCTAGTCAAATCAGCGCGGCCCAGGGTACTGAAGCAAGTAAAACTGCCTTCAATGCACTACGTTTGATTGTAACTGTT LLTVPLQIVEFFLILSAIAVVRAALFWKLLIASVVMLVGGYLGEVGAMSYWPAFAIGMAGWIYIIYEIFVGEASQISAAQGTEASKTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTAACTGTGCCACTGCAGATTGTCGAGTTTTTCTTGATTCTTTCTGCT---------ATA---GCTGTAGTTCGTGCT---GCTTTG------------------------------------TTCTGGAAG---CTGTTAATTGCATCCGTTGTGATGCTAGTTGGCGGTTATCTCGGGGAA---------GTT------------------GGA------GCT---------------------------------ATG------------------------------------------------------------------TCCTAT------------------TGGCCAGCG---TTCGCAATTGGTATGGCTGGGTGGATATACATTATCTACGAAATC---------------TTC------GTT---GGTGAAGCTAGTCAAATCAGCGCGGCC------CAG---GGTACTGAAGCAAGT---AAA---ACT---GCC---TTC---AAT---GCACTA---CGTTTGATTGTAACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFFLILSA---I-AVVRA-AL------------FWK-LLIASVVMLVGGYLGE---V------G--A-----------M----------------------SY------WPA-FAIGMAGWIYIIYEI-----F--V-GEASQISAA--Q-GTEAS-K-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ928856 [unk-Proteo2] PRGD_OTU057_29233c1c8388cbcfa463dc8ba5758095 gb|KJ928856| PRGD_OTU057_29233c1c8388cbcfa463dc8ba5758095, putative proteorhodopsin gene, partial cds. PRGD_OTU057_29233c1c8388cbcfa463dc8ba5758095, putative proteorhodopsin gene, partial cds. KJ928856 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) CTATTAACAGTGCCTCTTCAAATAATTGAATTCTACTTGATTCTAGCAGCCATTGCTGTTGTTGGAGCAGCGTTATTCTGGAGGTTGATGATTGCTTCAGTGGTAATGCTTGTTGCTGGTTATCTGGGTGAAATTGATGCAGTAAATGTATGGGGAGCTTTCATAGTCGGTATGGCCGCATGGATTTACATAATTTATGAAATCTTTGTGGGTGAAGCTAGCAAGATAAGTGCTGAAAATGGTACTGCTGCAAGTAAGACTGCGTTTAATGCTTTAAGAATTATTGTTACAGTT LLTVPLQIIEFYLILAAIAVVGAALFWRLMIASVVMLVAGYLGEIDAVNVWGAFIVGMAAWIYIIYEIFVGEASKISAENGTAASKTAFNALRIIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACAGTGCCTCTTCAAATAATTGAATTCTACTTGATTCTAGCAGCC---------ATT---GCTGTTGTTGGAGCA---GCGTTA------------------------------------TTCTGGAGG---TTGATGATTGCTTCAGTGGTAATGCTTGTTGCTGGTTATCTGGGTGAA---------ATT------------------GAT------GCA---------------------------------GTA------------------------------------------------------------------AATGTA------------------TGGGGAGCT---TTCATAGTCGGTATGGCCGCATGGATTTACATAATTTATGAAATC---------------TTT------GTG---GGTGAAGCTAGCAAGATAAGTGCTGAA------AAT---GGTACTGCTGCAAGT---AAG---ACT---GCG---TTT---AAT---GCTTTA---AGAATTATTGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVGA-AL------------FWR-LMIASVVMLVAGYLGE---I------D--A-----------V----------------------NV------WGA-FIVGMAAWIYIIYEI-----F--V-GEASKISAE--N-GTAAS-K-T-A-F-N-AL-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ928857 [unk-Proteo2] PRGD_OTU057_2ef230c0808bd24bc584473988007e7e gb|KJ928857| PRGD_OTU057_2ef230c0808bd24bc584473988007e7e, putative proteorhodopsin gene, partial cds. PRGD_OTU057_2ef230c0808bd24bc584473988007e7e, putative proteorhodopsin gene, partial cds. KJ928857 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), English Channel (48.7717, -3.9683) CTATTAACAGTGCCTCTTCAAATAATTGAATTCTACTTGATTCTAGCAGCCATTGCTGTTGTTGGAGCAGCGTTATTCTGGAGGTTGATGATTGCTTCAGTAGTAATGCTTGTTGCGGGTTATCTGGGTGAAATTGATGCAGTAAATGTATGGGGAGCTTTCATAGTCGGTATGGCCGCATGGATTTACATAATTTATGAGATCTTTGTGGGTGAAGCTAGCAAGATAAGTGCTGAAAACGGTACGGCTGCAAGTAAGACTGCGTTTAATGCTTTAAGAATTATTGTTACAGTT LLTVPLQIIEFYLILAAIAVVGAALFWRLMIASVVMLVAGYLGEIDAVNVWGAFIVGMAAWIYIIYEIFVGEASKISAENGTAASKTAFNALRIIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACAGTGCCTCTTCAAATAATTGAATTCTACTTGATTCTAGCAGCC---------ATT---GCTGTTGTTGGAGCA---GCGTTA------------------------------------TTCTGGAGG---TTGATGATTGCTTCAGTAGTAATGCTTGTTGCGGGTTATCTGGGTGAA---------ATT------------------GAT------GCA---------------------------------GTA------------------------------------------------------------------AATGTA------------------TGGGGAGCT---TTCATAGTCGGTATGGCCGCATGGATTTACATAATTTATGAGATC---------------TTT------GTG---GGTGAAGCTAGCAAGATAAGTGCTGAA------AAC---GGTACGGCTGCAAGT---AAG---ACT---GCG---TTT---AAT---GCTTTA---AGAATTATTGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVGA-AL------------FWR-LMIASVVMLVAGYLGE---I------D--A-----------V----------------------NV------WGA-FIVGMAAWIYIIYEI-----F--V-GEASKISAE--N-GTAAS-K-T-A-F-N-AL-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ928854 [unk-Proteo2] PRGD_OTU057_otuREP_c50f7a50562e6a1549d40bfaec64e30c gb|KJ928854| PRGD_OTU057_otuREP_c50f7a50562e6a1549d40bfaec64e30c, putative proteorhodopsin gene, partial cds. PRGD_OTU057_otuREP_c50f7a50562e6a1549d40bfaec64e30c, putative proteorhodopsin gene, partial cds. KJ928854 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTATTAACAGTGCCTCTTCAAATAATTGAATTCTACTTGATTCTAGCAGCCATTGCTGTTGTTGGAGCAGCGTTATTCTGGAGGTTGATGATTGCTTCAGTAGTAATGCTTGTTGCTGGTTATCTGGGCGAAATTGATGCAGTAAACGTATGGGGAGCTTTCATAGTCGGTATGGCCGCATGGATTTACATAATTTATGAGATCTTTGTAGGTGAAGCTAGCAAGATAAGTGCTGAAAACGGTACGGCTGCAAGTAAGACTGCGTTTAATGCTTTAAGAATTATTGTTACAGTT LLTVPLQIIEFYLILAAIAVVGAALFWRLMIASVVMLVAGYLGEIDAVNVWGAFIVGMAAWIYIIYEIFVGEASKISAENGTAASKTAFNALRIIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACAGTGCCTCTTCAAATAATTGAATTCTACTTGATTCTAGCAGCC---------ATT---GCTGTTGTTGGAGCA---GCGTTA------------------------------------TTCTGGAGG---TTGATGATTGCTTCAGTAGTAATGCTTGTTGCTGGTTATCTGGGCGAA---------ATT------------------GAT------GCA---------------------------------GTA------------------------------------------------------------------AACGTA------------------TGGGGAGCT---TTCATAGTCGGTATGGCCGCATGGATTTACATAATTTATGAGATC---------------TTT------GTA---GGTGAAGCTAGCAAGATAAGTGCTGAA------AAC---GGTACGGCTGCAAGT---AAG---ACT---GCG---TTT---AAT---GCTTTA---AGAATTATTGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVGA-AL------------FWR-LMIASVVMLVAGYLGE---I------D--A-----------V----------------------NV------WGA-FIVGMAAWIYIIYEI-----F--V-GEASKISAE--N-GTAAS-K-T-A-F-N-AL-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ928865 [unk-Proteo2] PRGD_OTU057_a3f03195ece7188904e262b46f2f5ce3 gb|KJ928865| PRGD_OTU057_a3f03195ece7188904e262b46f2f5ce3, putative proteorhodopsin gene, partial cds. PRGD_OTU057_a3f03195ece7188904e262b46f2f5ce3, putative proteorhodopsin gene, partial cds. KJ928865 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTATTAACAGTGCCTCTTCAAATAATTGAATTCTACTTGATTCTAGCAGCTATTGCTGTTGTTGGAGCAGCGTTATTCTGGAGGTTGATGATTGCTTCAGTAGTAATGCTTGTTGCTGGTTATTTGGGTGAAATTGATGCAGTAAATGTATGGGGAGCTTTCATAGTCGGTATGGCCGCATGGATTTACATAATTTATGAGATCTTTGTGGGTGAAGCTAGCAAGATAAGTGCTGAAAACGGTACGGCTGCGAGTAAGACTGCGTTTAATGCTTTAAGAATTATTGTTACAGTT LLTVPLQIIEFYLILAAIAVVGAALFWRLMIASVVMLVAGYLGEIDAVNVWGAFIVGMAAWIYIIYEIFVGEASKISAENGTAASKTAFNALRIIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACAGTGCCTCTTCAAATAATTGAATTCTACTTGATTCTAGCAGCT---------ATT---GCTGTTGTTGGAGCA---GCGTTA------------------------------------TTCTGGAGG---TTGATGATTGCTTCAGTAGTAATGCTTGTTGCTGGTTATTTGGGTGAA---------ATT------------------GAT------GCA---------------------------------GTA------------------------------------------------------------------AATGTA------------------TGGGGAGCT---TTCATAGTCGGTATGGCCGCATGGATTTACATAATTTATGAGATC---------------TTT------GTG---GGTGAAGCTAGCAAGATAAGTGCTGAA------AAC---GGTACGGCTGCGAGT---AAG---ACT---GCG---TTT---AAT---GCTTTA---AGAATTATTGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVGA-AL------------FWR-LMIASVVMLVAGYLGE---I------D--A-----------V----------------------NV------WGA-FIVGMAAWIYIIYEI-----F--V-GEASKISAE--N-GTAAS-K-T-A-F-N-AL-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ928862 [unk-Proteo2] PRGD_OTU057_6485f621c4adbccfb6c2a971f8f09a3e gb|KJ928862| PRGD_OTU057_6485f621c4adbccfb6c2a971f8f09a3e, putative proteorhodopsin gene, partial cds. PRGD_OTU057_6485f621c4adbccfb6c2a971f8f09a3e, putative proteorhodopsin gene, partial cds. KJ928862 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12) CTATTAACAGTGCCTCTCCAAATCATTGAATTCTATCTAATTCTAGCAGCTATTGCTGTTGTTGGAGCATCACTATTCTGGAGATTGATGATTGCTTCGGTTGTAATGCTTGTAGCAGGATACTTAGGTGAAGTTGGTTCAGTAAATGTGTGGGGAGCCTTTGTAGTAGGTATGGCCGCATGGATTTATATAATCTACGAGATTTTTGTGGGTGAAGCGAGCAAGATAAGTGCTGAAAATGGTACAGCCGCGAGTAAGACAGCGTTTAATGCTCTAAGAATAATTGTTACATTT LLTVPLQIIEFYLILAAIAVVGASLFWRLMIASVVMLVAGYLGEVGSVNVWGAFVVGMAAWIYIIYEIFVGEASKISAENGTAASKTAFNALRIIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACAGTGCCTCTCCAAATCATTGAATTCTATCTAATTCTAGCAGCT---------ATT---GCTGTTGTTGGAGCA---TCACTA------------------------------------TTCTGGAGA---TTGATGATTGCTTCGGTTGTAATGCTTGTAGCAGGATACTTAGGTGAA---------GTT------------------GGT------TCA---------------------------------GTA------------------------------------------------------------------AATGTG------------------TGGGGAGCC---TTTGTAGTAGGTATGGCCGCATGGATTTATATAATCTACGAGATT---------------TTT------GTG---GGTGAAGCGAGCAAGATAAGTGCTGAA------AAT---GGTACAGCCGCGAGT---AAG---ACA---GCG---TTT---AAT---GCTCTA---AGAATAATTGTTACATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVGA-SL------------FWR-LMIASVVMLVAGYLGE---V------G--S-----------V----------------------NV------WGA-FVVGMAAWIYIIYEI-----F--V-GEASKISAE--N-GTAAS-K-T-A-F-N-AL-RIIVTF-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ928863 [unk-Proteo2] PRGD_OTU057_77c4ed69c7368fb087d7cd7e7b06c184 gb|KJ928863| PRGD_OTU057_77c4ed69c7368fb087d7cd7e7b06c184, putative proteorhodopsin gene, partial cds. PRGD_OTU057_77c4ed69c7368fb087d7cd7e7b06c184, putative proteorhodopsin gene, partial cds. KJ928863 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185) CTATTAACAGTGCCTCTCCAAATCATTGAATTCTATCTAATTCTAGCAGCTATTGCTATTGTTGGAGCAGCGTTATTCTGGAGATTGATGATTGCTTCAGTCGTAATGCTTGTAGCAGGATACTTAGGTGAAGTTGGTTCAGTAAATGTGTGGGGAGCCTTTGTAGTAGGTATGGCCGCATGGATTTACATAATCTACGAGATTTTTGTAGGTGAAGCGAGCAAGATAAGCGCTGAAAATGGTACAGCCGCGAGTAAGACAGCGTTTAATGCTCTAAGAATAATTGTTACATTT LLTVPLQIIEFYLILAAIAIVGAALFWRLMIASVVMLVAGYLGEVGSVNVWGAFVVGMAAWIYIIYEIFVGEASKISAENGTAASKTAFNALRIIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACAGTGCCTCTCCAAATCATTGAATTCTATCTAATTCTAGCAGCT---------ATT---GCTATTGTTGGAGCA---GCGTTA------------------------------------TTCTGGAGA---TTGATGATTGCTTCAGTCGTAATGCTTGTAGCAGGATACTTAGGTGAA---------GTT------------------GGT------TCA---------------------------------GTA------------------------------------------------------------------AATGTG------------------TGGGGAGCC---TTTGTAGTAGGTATGGCCGCATGGATTTACATAATCTACGAGATT---------------TTT------GTA---GGTGAAGCGAGCAAGATAAGCGCTGAA------AAT---GGTACAGCCGCGAGT---AAG---ACA---GCG---TTT---AAT---GCTCTA---AGAATAATTGTTACATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AIVGA-AL------------FWR-LMIASVVMLVAGYLGE---V------G--S-----------V----------------------NV------WGA-FVVGMAAWIYIIYEI-----F--V-GEASKISAE--N-GTAAS-K-T-A-F-N-AL-RIIVTF-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ928867 [unk-Proteo2] PRGD_OTU057_b8fe38de6ec75b5bf3eab4122a325e46 gb|KJ928867| PRGD_OTU057_b8fe38de6ec75b5bf3eab4122a325e46, putative proteorhodopsin gene, partial cds. PRGD_OTU057_b8fe38de6ec75b5bf3eab4122a325e46, putative proteorhodopsin gene, partial cds. KJ928867 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) CTATTAACAGTGCCTCTTCAAATAATTGAATTCTACTTGATTCTAGCAGCTATTGCTGTTGTTGGAGCAGCGTTATTCTGGAGGTTGATGATTGCCTCAGTCGTAATGCTTGTTGCTGGTTACCTGGGTGAAGTTGGTTCAGTGAATGTATGGGGAGCTTTCGTAGTAGGTATGGCCGCATGGATTTATATAATTTATGAGATCTTTATAGGTGAAGCTAGCAAGATAAGTGCTGAAAGTGGAACTGCAGCAAGTAAGACTGCGTTTAATGCTTTAAGACTTATTGTTACAGTT LLTVPLQIIEFYLILAAIAVVGAALFWRLMIASVVMLVAGYLGEVGSVNVWGAFVVGMAAWIYIIYEIFIGEASKISAESGTAASKTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACAGTGCCTCTTCAAATAATTGAATTCTACTTGATTCTAGCAGCT---------ATT---GCTGTTGTTGGAGCA---GCGTTA------------------------------------TTCTGGAGG---TTGATGATTGCCTCAGTCGTAATGCTTGTTGCTGGTTACCTGGGTGAA---------GTT------------------GGT------TCA---------------------------------GTG------------------------------------------------------------------AATGTA------------------TGGGGAGCT---TTCGTAGTAGGTATGGCCGCATGGATTTATATAATTTATGAGATC---------------TTT------ATA---GGTGAAGCTAGCAAGATAAGTGCTGAA------AGT---GGAACTGCAGCAAGT---AAG---ACT---GCG---TTT---AAT---GCTTTA---AGACTTATTGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVGA-AL------------FWR-LMIASVVMLVAGYLGE---V------G--S-----------V----------------------NV------WGA-FVVGMAAWIYIIYEI-----F--I-GEASKISAE--S-GTAAS-K-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ928859 [unk-Proteo2] PRGD_OTU057_37b631fd91449cc108a44fafd2f9ea1e gb|KJ928859| PRGD_OTU057_37b631fd91449cc108a44fafd2f9ea1e, putative proteorhodopsin gene, partial cds. PRGD_OTU057_37b631fd91449cc108a44fafd2f9ea1e, putative proteorhodopsin gene, partial cds. KJ928859 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) CTCTTAACAGTACCCCTTCAAATTGTAGAGTTTTACTTGATACTTGCTGCTATTGCTGTTGTAGGTGCATCACTCTTCTGGAGACTGATGATTGCTTCTGTAGTCATGCTTGTTGCAGGTTATCTAGGCGAAGTAGGAACGTTTAATGTGTGGGGAGCTTTCATAGTTGGAATGGCTGCTTGGATTTATATAATTTACGAAATCTTCGTCGGAGAAGCTAGTAAGATAAATGCAGAAAATGGAACAGAGGCGAGTAAATCAGCATTTAATGCGCTTAGACTTATTGTTACCGTT LLTVPLQIVEFYLILAAIAVVGASLFWRLMIASVVMLVAGYLGEVGTFNVWGAFIVGMAAWIYIIYEIFVGEASKINAENGTEASKSAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACAGTACCCCTTCAAATTGTAGAGTTTTACTTGATACTTGCTGCT---------ATT---GCTGTTGTAGGTGCA---TCACTC------------------------------------TTCTGGAGA---CTGATGATTGCTTCTGTAGTCATGCTTGTTGCAGGTTATCTAGGCGAA---------GTA------------------GGA------ACG---------------------------------TTT------------------------------------------------------------------AATGTG------------------TGGGGAGCT---TTCATAGTTGGAATGGCTGCTTGGATTTATATAATTTACGAAATC---------------TTC------GTC---GGAGAAGCTAGTAAGATAAATGCAGAA------AAT---GGAACAGAGGCGAGT---AAA---TCA---GCA---TTT---AAT---GCGCTT---AGACTTATTGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVGA-SL------------FWR-LMIASVVMLVAGYLGE---V------G--T-----------F----------------------NV------WGA-FIVGMAAWIYIIYEI-----F--V-GEASKINAE--N-GTEAS-K-S-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ928864 [unk-Proteo2] PRGD_OTU057_8aa137b4865c528839af0fdac7027483 gb|KJ928864| PRGD_OTU057_8aa137b4865c528839af0fdac7027483, putative proteorhodopsin gene, partial cds. PRGD_OTU057_8aa137b4865c528839af0fdac7027483, putative proteorhodopsin gene, partial cds. KJ928864 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCTTAACAGTACCCCTTCAAATTGTAGAGTTTTACTTGATACTTGCTGCTATTGCTGTTGTAGGTGCATCACTCTTCTGGAGACTGATGATTGCTTCTGTAGTCATGCTTGTCGCAGGTTATCTAGGCGAAGTGGGAACATTTAATGTGTGGGGAGCGTTCATAGTTGGAATGGCTGCCTGGATTTATATAATTTACGAAATCTTCGTCGGAGAAGCTAGTAAGATAAATGCAGAAAATGGAACAGAGGCGAGTAAAAAAGCATTTAATGCGCTTAGACTTATTGTTACCGTT LLTVPLQIVEFYLILAAIAVVGASLFWRLMIASVVMLVAGYLGEVGTFNVWGAFIVGMAAWIYIIYEIFVGEASKINAENGTEASKKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACAGTACCCCTTCAAATTGTAGAGTTTTACTTGATACTTGCTGCT---------ATT---GCTGTTGTAGGTGCA---TCACTC------------------------------------TTCTGGAGA---CTGATGATTGCTTCTGTAGTCATGCTTGTCGCAGGTTATCTAGGCGAA---------GTG------------------GGA------ACA---------------------------------TTT------------------------------------------------------------------AATGTG------------------TGGGGAGCG---TTCATAGTTGGAATGGCTGCCTGGATTTATATAATTTACGAAATC---------------TTC------GTC---GGAGAAGCTAGTAAGATAAATGCAGAA------AAT---GGAACAGAGGCGAGT---AAA---AAA---GCA---TTT---AAT---GCGCTT---AGACTTATTGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVGA-SL------------FWR-LMIASVVMLVAGYLGE---V------G--T-----------F----------------------NV------WGA-FIVGMAAWIYIIYEI-----F--V-GEASKINAE--N-GTEAS-K-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ928866 [unk-Proteo2] PRGD_OTU057_b4fe7872ef7b01b19ee2050d52653321 gb|KJ928866| PRGD_OTU057_b4fe7872ef7b01b19ee2050d52653321, putative proteorhodopsin gene, partial cds. PRGD_OTU057_b4fe7872ef7b01b19ee2050d52653321, putative proteorhodopsin gene, partial cds. KJ928866 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097) CTCTTAACAGTACCCCTTCAAATTGTAGAGTTTTACTTGATACTTGCTGCTATTGCTGTTGTAGGTGCATCACTCTTCTGGAGACTGATGATTGCTTCTGTAGTCATGCTTGTTGCAGGTTATCTAGGCGAAGTGGGAACATTTAATGTGTGGGGAGCGTTCATAGTTGGAATGGCTGCTTGGATTTATATAATTTACGAAATCTTCGTTGGAGAAGCTAGTAAAATAAATGCAGAAAATGGAACAGAGGCGAGTAAAACAGCATTTAGTGCACTTAGACTTATTGTTACCGTT LLTVPLQIVEFYLILAAIAVVGASLFWRLMIASVVMLVAGYLGEVGTFNVWGAFIVGMAAWIYIIYEIFVGEASKINAENGTEASKTAFSALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACAGTACCCCTTCAAATTGTAGAGTTTTACTTGATACTTGCTGCT---------ATT---GCTGTTGTAGGTGCA---TCACTC------------------------------------TTCTGGAGA---CTGATGATTGCTTCTGTAGTCATGCTTGTTGCAGGTTATCTAGGCGAA---------GTG------------------GGA------ACA---------------------------------TTT------------------------------------------------------------------AATGTG------------------TGGGGAGCG---TTCATAGTTGGAATGGCTGCTTGGATTTATATAATTTACGAAATC---------------TTC------GTT---GGAGAAGCTAGTAAAATAAATGCAGAA------AAT---GGAACAGAGGCGAGT---AAA---ACA---GCA---TTT---AGT---GCACTT---AGACTTATTGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVGA-SL------------FWR-LMIASVVMLVAGYLGE---V------G--T-----------F----------------------NV------WGA-FIVGMAAWIYIIYEI-----F--V-GEASKINAE--N-GTEAS-K-T-A-F-S-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ928860 [unk-Proteo2] PRGD_OTU057_382655102d860916953a6bbe35b68474 gb|KJ928860| PRGD_OTU057_382655102d860916953a6bbe35b68474, putative proteorhodopsin gene, partial cds. PRGD_OTU057_382655102d860916953a6bbe35b68474, putative proteorhodopsin gene, partial cds. KJ928860 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCTTAACAGTACCCCTTCAAATTGTAGAGTTTTACTTGATACTTGCTGCTATTGCTGTTGTAGGTGCATCACTCTTCTGGAGACTGATGATTGCTTCTGTAGTCATGCTTGTTGCAGGTTATCTAGGTGAAGTGGGAACATTTAATGTCTGGGGAGCTTTCGTAGTTGGAATGGCTGCTTGGATTTATATAATCTACGAAATCTTTATCGGAGAAGCCAGCCAGATAAATGCAGAAAATGGAACAGAGGCGAGTAAAACGGCGTTTAATGCGCTCAGACTTATTGTTACCGTT LLTVPLQIVEFYLILAAIAVVGASLFWRLMIASVVMLVAGYLGEVGTFNVWGAFVVGMAAWIYIIYEIFIGEASQINAENGTEASKTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACAGTACCCCTTCAAATTGTAGAGTTTTACTTGATACTTGCTGCT---------ATT---GCTGTTGTAGGTGCA---TCACTC------------------------------------TTCTGGAGA---CTGATGATTGCTTCTGTAGTCATGCTTGTTGCAGGTTATCTAGGTGAA---------GTG------------------GGA------ACA---------------------------------TTT------------------------------------------------------------------AATGTC------------------TGGGGAGCT---TTCGTAGTTGGAATGGCTGCTTGGATTTATATAATCTACGAAATC---------------TTT------ATC---GGAGAAGCCAGCCAGATAAATGCAGAA------AAT---GGAACAGAGGCGAGT---AAA---ACG---GCG---TTT---AAT---GCGCTC---AGACTTATTGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVGA-SL------------FWR-LMIASVVMLVAGYLGE---V------G--T-----------F----------------------NV------WGA-FVVGMAAWIYIIYEI-----F--I-GEASQINAE--N-GTEAS-K-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ928861 [unk-Proteo2] PRGD_OTU057_5e57b247825f231b753d2fa5770649a5 gb|KJ928861| PRGD_OTU057_5e57b247825f231b753d2fa5770649a5, putative proteorhodopsin gene, partial cds. PRGD_OTU057_5e57b247825f231b753d2fa5770649a5, putative proteorhodopsin gene, partial cds. KJ928861 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -33.9602, -73.3769), Arctic Ocean-Pacific side (72.0542, -130.8781; 69.5142, -133.4185), Indian Ocean (-33.28, 45.35) CTTTTAACTGTACCCCTTCAAATTGTAGAGTTTTACCTGATACTTGCGGCTATTGCTGTGGTAGGCGCATCACTTTTCTGGAGACTGATGATTGCTTCTGTAGTAATGCTCGTTGCAGGTTATCTAGGTGAAGTCGGAACATTTAATGTGTGGGGAGCTTTCGTAGTTGGAATGGCTGCATGGATATATATCATTTATGAAATATTTATCGGAGAAGCTAGTAAAATAAGTGCAGAAAACGGAACAGAAGCTAGCAAAACAGCATTTAATGCTCTTAGGCTTATTGTCACAGTT LLTVPLQIVEFYLILAAIAVVGASLFWRLMIASVVMLVAGYLGEVGTFNVWGAFVVGMAAWIYIIYEIFIGEASKISAENGTEASKTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTAACTGTACCCCTTCAAATTGTAGAGTTTTACCTGATACTTGCGGCT---------ATT---GCTGTGGTAGGCGCA---TCACTT------------------------------------TTCTGGAGA---CTGATGATTGCTTCTGTAGTAATGCTCGTTGCAGGTTATCTAGGTGAA---------GTC------------------GGA------ACA---------------------------------TTT------------------------------------------------------------------AATGTG------------------TGGGGAGCT---TTCGTAGTTGGAATGGCTGCATGGATATATATCATTTATGAAATA---------------TTT------ATC---GGAGAAGCTAGTAAAATAAGTGCAGAA------AAC---GGAACAGAAGCTAGC---AAA---ACA---GCA---TTT---AAT---GCTCTT---AGGCTTATTGTCACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVGA-SL------------FWR-LMIASVVMLVAGYLGE---V------G--T-----------F----------------------NV------WGA-FVVGMAAWIYIIYEI-----F--I-GEASKISAE--N-GTEAS-K-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ928868 [unk-Proteo2] PRGD_OTU057_c4311f930217d80ba2938c2e39a1b33a gb|KJ928868| PRGD_OTU057_c4311f930217d80ba2938c2e39a1b33a, putative proteorhodopsin gene, partial cds. PRGD_OTU057_c4311f930217d80ba2938c2e39a1b33a, putative proteorhodopsin gene, partial cds. KJ928868 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) CTTTTAACGGTACCGCTTCAAATTATAGAGTTTTACCTGATACTTGCTGCTATCGCTGTTGTAGGCGCATCAATCTTCTGGAGACTGATGATTGCTTCTGTAGTAATGCTCGTTGCAGGTTATCTAGGTGAAGTCGGAACATTTAATGTGTGGGGAGCTTTCGTAGTTGGAATGGCTGCATGGATATATATCATTTATGAAATATTTATCGGAGAAGCTAGTAAAATAAGTGCAGAAAACGGAACAGAAGCTAGCAAAACAGCATTTAATGCTCTTAGGCTTATTGTCACAGTT LLTVPLQIIEFYLILAAIAVVGASIFWRLMIASVVMLVAGYLGEVGTFNVWGAFVVGMAAWIYIIYEIFIGEASKISAENGTEASKTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTAACGGTACCGCTTCAAATTATAGAGTTTTACCTGATACTTGCTGCT---------ATC---GCTGTTGTAGGCGCA---TCAATC------------------------------------TTCTGGAGA---CTGATGATTGCTTCTGTAGTAATGCTCGTTGCAGGTTATCTAGGTGAA---------GTC------------------GGA------ACA---------------------------------TTT------------------------------------------------------------------AATGTG------------------TGGGGAGCT---TTCGTAGTTGGAATGGCTGCATGGATATATATCATTTATGAAATA---------------TTT------ATC---GGAGAAGCTAGTAAAATAAGTGCAGAA------AAC---GGAACAGAAGCTAGC---AAA---ACA---GCA---TTT---AAT---GCTCTT---AGGCTTATTGTCACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVGA-SI------------FWR-LMIASVVMLVAGYLGE---V------G--T-----------F----------------------NV------WGA-FVVGMAAWIYIIYEI-----F--I-GEASKISAE--N-GTEAS-K-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ928855 [unk-Proteo2] PRGD_OTU057_1a14bcc00557fa20dc1fc92cf6f3351f gb|KJ928855| PRGD_OTU057_1a14bcc00557fa20dc1fc92cf6f3351f, putative proteorhodopsin gene, partial cds. PRGD_OTU057_1a14bcc00557fa20dc1fc92cf6f3351f, putative proteorhodopsin gene, partial cds. KJ928855 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTATTAACAGTGCCTCTTCAAATTATAGAATTTTACTTGATACTTGCTGCTATTGCTGTCGTAGGTGCAGCTCTATTCTGGCGTTTGATGATTGCATCAGTAGTTATGCTTGTAGCCGGGTATCTCGGTGAAGTTGGTACTATGGAAGAAGCGACATTTTCTGTAAACGTATGGGGAGCATTCATAGTAGGTATGGCGGCTTGGATCTATATAATTTATGAGATTTTTGTCGGCGAAGCCAGTAAGATAAGTGCAGAAAATGGAACAGAGGCTAGTAAAAAAGCATTTAATGCGCTTAGGCTTATTGTGACCGTA LLTVPLQIIEFYLILAAIAVVGAALFWRLMIASVVMLVAGYLGEVGTMEEATFSVNVWGAFIVGMAAWIYIIYEIFVGEASKISAENGTEASKKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACAGTGCCTCTTCAAATTATAGAATTTTACTTGATACTTGCTGCT---------ATT---GCTGTCGTAGGTGCA---GCTCTA------------------------------------TTCTGGCGT---TTGATGATTGCATCAGTAGTTATGCTTGTAGCCGGGTATCTCGGTGAA---------GTT------------------GGT------ACT---------------------------------ATGGAA---GAAGCG------ACATTT---------TCT---------------------------GTAAACGTA------------------TGGGGAGCA---TTCATAGTAGGTATGGCGGCTTGGATCTATATAATTTATGAGATT---------------TTT------GTC---GGCGAAGCCAGTAAGATAAGTGCAGAA------AAT---GGAACAGAGGCTAGT---AAA---AAA---GCA---TTT---AAT---GCGCTT---AGGCTTATTGTGACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVGA-AL------------FWR-LMIASVVMLVAGYLGE---V------G--T-----------ME-EA--TF---S---------VNV------WGA-FIVGMAAWIYIIYEI-----F--V-GEASKISAE--N-GTEAS-K-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ928869 [unk-Proteo2] PRGD_OTU057_d568d164f040d29c80d6cacfca987262 gb|KJ928869| PRGD_OTU057_d568d164f040d29c80d6cacfca987262, putative proteorhodopsin gene, partial cds. PRGD_OTU057_d568d164f040d29c80d6cacfca987262, putative proteorhodopsin gene, partial cds. KJ928869 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) CTATTAACAGTGCCTCTTCAAATTATAGAATTTTACTTGATACTTGCTGCTATTGCTGTCGTAGGTGCAGCTCTATTCTGGCGTTTGATGATTGCATCAGTAGTTATGCTTGTAGCTGGGTATCTCGGTGAAGTTGGTACTATGGAAGGAGCGACATTTTCTGTAAACGTATGGGGAGCATTCATAGTAGGTATGGCGGCTTGGATCTATATAATTTATGAGATTTTTGTCGGCGAAGCCAGTAAGATAAGTGCAGAAAATGGAACAGAGGCTAGTAAAACAGCATTTAATGCGCTTAGGCTTATTGTGACCGTT LLTVPLQIIEFYLILAAIAVVGAALFWRLMIASVVMLVAGYLGEVGTMEGATFSVNVWGAFIVGMAAWIYIIYEIFVGEASKISAENGTEASKTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACAGTGCCTCTTCAAATTATAGAATTTTACTTGATACTTGCTGCT---------ATT---GCTGTCGTAGGTGCA---GCTCTA------------------------------------TTCTGGCGT---TTGATGATTGCATCAGTAGTTATGCTTGTAGCTGGGTATCTCGGTGAA---------GTT------------------GGT------ACT---------------------------------ATGGAA---GGAGCG------ACATTT---------TCT---------------------------GTAAACGTA------------------TGGGGAGCA---TTCATAGTAGGTATGGCGGCTTGGATCTATATAATTTATGAGATT---------------TTT------GTC---GGCGAAGCCAGTAAGATAAGTGCAGAA------AAT---GGAACAGAGGCTAGT---AAA---ACA---GCA---TTT---AAT---GCGCTT---AGGCTTATTGTGACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVGA-AL------------FWR-LMIASVVMLVAGYLGE---V------G--T-----------ME-GA--TF---S---------VNV------WGA-FIVGMAAWIYIIYEI-----F--V-GEASKISAE--N-GTEAS-K-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ928858 [unk-Proteo2] PRGD_OTU057_31e3e4f6c2232f656aea513a126f745b gb|KJ928858| PRGD_OTU057_31e3e4f6c2232f656aea513a126f745b, putative proteorhodopsin gene, partial cds. PRGD_OTU057_31e3e4f6c2232f656aea513a126f745b, putative proteorhodopsin gene, partial cds. KJ928858 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-35.05, 23.73) CTGCTCACTGTACCGCTTCAAATTATCGAGTTTTATTTGATACTTGCTGCGATTGCAGTTGTAGGTGCCTCACTCTTTTGGAGGTTAATGATAGCCTCCGTTGTGATGCTTGTAGCAGGTTACCTGGGTGAAGTAGGTTCAGTTAACGTCTGGGGAGCATTCATAGTTGGCATGGCAGCATGGATCTATATAATTTATGAAATCTTTATTGGCGAGGCCAGTAAAATAAGTGCAGAAAGCGGAACCGTAGCAAGTCAAACAGCATTTAATGCTCTGAGACTTATTGTTACCGTC LLTVPLQIIEFYLILAAIAVVGASLFWRLMIASVVMLVAGYLGEVGSVNVWGAFIVGMAAWIYIIYEIFIGEASKISAESGTVASQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTCACTGTACCGCTTCAAATTATCGAGTTTTATTTGATACTTGCTGCG---------ATT---GCAGTTGTAGGTGCC---TCACTC------------------------------------TTTTGGAGG---TTAATGATAGCCTCCGTTGTGATGCTTGTAGCAGGTTACCTGGGTGAA---------GTA------------------GGT------TCA---------------------------------GTT------------------------------------------------------------------AACGTC------------------TGGGGAGCA---TTCATAGTTGGCATGGCAGCATGGATCTATATAATTTATGAAATC---------------TTT------ATT---GGCGAGGCCAGTAAAATAAGTGCAGAA------AGC---GGAACCGTAGCAAGT---CAA---ACA---GCA---TTT---AAT---GCTCTG---AGACTTATTGTTACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVGA-SL------------FWR-LMIASVVMLVAGYLGE---V------G--S-----------V----------------------NV------WGA-FIVGMAAWIYIIYEI-----F--I-GEASKISAE--S-GTVAS-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ928902 [unk-Proteo2] PRGD_OTU060_24fefceaddfaadf84fa703632887eb15 gb|KJ928902| PRGD_OTU060_24fefceaddfaadf84fa703632887eb15, putative proteorhodopsin gene, partial cds. PRGD_OTU060_24fefceaddfaadf84fa703632887eb15, putative proteorhodopsin gene, partial cds. KJ928902 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45; -33.28, 45.35) CTTTTAACAGTACCACTACAGATAGTTGAGTTTTATCTAATACTAGCTGCAATTGCTGTAGTTAAATCATCATTATTTTGGAGATTATTGATAGCTTCAGTAATTATGCTTGTAGCAGGATATTTAGGTGAAGTTGGTTCTGTAAATGTTTGGGCTGGTTTTGTAGTTGGAATGCTTGGATGGCTTTACATCATATATGAAGTATTTGCAGGAGAAGCTAGTCAAATAAATGCCAGCAAGGGAACAGCAGCAAGTCAAAAAGCATTTAATGCACTGAGACTTATAGTTACTATA LLTVPLQIVEFYLILAAIAVVKSSLFWRLLIASVIMLVAGYLGEVGSVNVWAGFVVGMLGWLYIIYEVFAGEASQINASKGTAASQKAFNALRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTAACAGTACCACTACAGATAGTTGAGTTTTATCTAATACTAGCTGCA---------ATT---GCTGTAGTTAAATCA---TCATTA------------------------------------TTTTGGAGA---TTATTGATAGCTTCAGTAATTATGCTTGTAGCAGGATATTTAGGTGAA---------GTT------------------GGT------TCT---------------------------------GTA------------------------------------------------------------------AATGTT------------------TGGGCTGGT---TTTGTAGTTGGAATGCTTGGATGGCTTTACATCATATATGAAGTA---------------TTT------GCA---GGAGAAGCTAGTCAAATAAATGCCAGC------AAG---GGAACAGCAGCAAGT---CAA---AAA---GCA---TTT---AAT---GCACTG---AGACTTATAGTTACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVKS-SL------------FWR-LLIASVIMLVAGYLGE---V------G--S-----------V----------------------NV------WAG-FVVGMLGWLYIIYEV-----F--A-GEASQINAS--K-GTAAS-Q-K-A-F-N-AL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ928912 [unk-Proteo2] PRGD_OTU060_cb1c7510598d5cc5bd48cbdc79f0023c gb|KJ928912| PRGD_OTU060_cb1c7510598d5cc5bd48cbdc79f0023c, putative proteorhodopsin gene, partial cds. PRGD_OTU060_cb1c7510598d5cc5bd48cbdc79f0023c, putative proteorhodopsin gene, partial cds. KJ928912 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTTTTAACAGTACCACTACAAATAGTTGAGTTTTATCTAATACTAGCTGCAATTGCTGTAGTTAAATCATCATTATTTTGGAGATTATTGATAGCTTCTGTAATTATGCTTGTAGCAGGATATCTAGGTGAAGTTGGTTCTGTAAATGTTTGGGCTGGTTTTGTAGTTGGAATGCTTGGATGGCTTTACATCATATATGAAGTATTTGCAGGAGAAGCTAGTCAAATAAATGCCAGCAAAGGAACAGCAGCAAGTCAAAGAGCATTTAATGCACTGAGACTTATAGTTACTATA LLTVPLQIVEFYLILAAIAVVKSSLFWRLLIASVIMLVAGYLGEVGSVNVWAGFVVGMLGWLYIIYEVFAGEASQINASKGTAASQRAFNALRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTAACAGTACCACTACAAATAGTTGAGTTTTATCTAATACTAGCTGCA---------ATT---GCTGTAGTTAAATCA---TCATTA------------------------------------TTTTGGAGA---TTATTGATAGCTTCTGTAATTATGCTTGTAGCAGGATATCTAGGTGAA---------GTT------------------GGT------TCT---------------------------------GTA------------------------------------------------------------------AATGTT------------------TGGGCTGGT---TTTGTAGTTGGAATGCTTGGATGGCTTTACATCATATATGAAGTA---------------TTT------GCA---GGAGAAGCTAGTCAAATAAATGCCAGC------AAA---GGAACAGCAGCAAGT---CAA---AGA---GCA---TTT---AAT---GCACTG---AGACTTATAGTTACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVKS-SL------------FWR-LLIASVIMLVAGYLGE---V------G--S-----------V----------------------NV------WAG-FVVGMLGWLYIIYEV-----F--A-GEASQINAS--K-GTAAS-Q-R-A-F-N-AL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ928906 [unk-Proteo2] PRGD_OTU060_8d860ee06f7109df4a8a0bde703d6763 gb|KJ928906| PRGD_OTU060_8d860ee06f7109df4a8a0bde703d6763, putative proteorhodopsin gene, partial cds. PRGD_OTU060_8d860ee06f7109df4a8a0bde703d6763, putative proteorhodopsin gene, partial cds. KJ928906 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTTTTAACAGTACCACTGCAGATAGTTGAGTTTTATCTAATACTAGCTGCAATTGCTGTAGTTAAATCTTCATTATTTTGGAGATTATTGATAGCTTCAGTAATTATGCTTGTAGCAGGATATTTGGGTGAAGTTGGATCTGTAAATGTTTGGGCTGGTTTTGTAGTAGGAATGCTTGGATGGCTTTACATCATATATGAGGTATTTGCTGGAGAAGCTAGTCAAATAAATGCCAGCAAAGGAACGGCAGCAAGTCAAAGAGCATTTAATGCACTTAGGCTTATAGTTACTATA LLTVPLQIVEFYLILAAIAVVKSSLFWRLLIASVIMLVAGYLGEVGSVNVWAGFVVGMLGWLYIIYEVFAGEASQINASKGTAASQRAFNALRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTAACAGTACCACTGCAGATAGTTGAGTTTTATCTAATACTAGCTGCA---------ATT---GCTGTAGTTAAATCT---TCATTA------------------------------------TTTTGGAGA---TTATTGATAGCTTCAGTAATTATGCTTGTAGCAGGATATTTGGGTGAA---------GTT------------------GGA------TCT---------------------------------GTA------------------------------------------------------------------AATGTT------------------TGGGCTGGT---TTTGTAGTAGGAATGCTTGGATGGCTTTACATCATATATGAGGTA---------------TTT------GCT---GGAGAAGCTAGTCAAATAAATGCCAGC------AAA---GGAACGGCAGCAAGT---CAA---AGA---GCA---TTT---AAT---GCACTT---AGGCTTATAGTTACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVKS-SL------------FWR-LLIASVIMLVAGYLGE---V------G--S-----------V----------------------NV------WAG-FVVGMLGWLYIIYEV-----F--A-GEASQINAS--K-GTAAS-Q-R-A-F-N-AL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ928909 [unk-Proteo2] PRGD_OTU060_a81b0160d31a397ca1b59379b234c3ab gb|KJ928909| PRGD_OTU060_a81b0160d31a397ca1b59379b234c3ab, putative proteorhodopsin gene, partial cds. PRGD_OTU060_a81b0160d31a397ca1b59379b234c3ab, putative proteorhodopsin gene, partial cds. KJ928909 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTTTAACAGTACCACTACAAATAGTTGAGTTTTATCTAATACTAGCTGCAATTGCTGTAGTTAAATCATCATTATTTTGGAGATTATTGATAGCTTCAGTAATTATGCTTGTAGCAGGGTATTTAGGTGAAGTTGGATCTGTTAATGTTTGGGCTGGTTTTGTAGTTGGAATGCTTGGATGGCTTTACATCATATATGAAGTATTTGCAGGAGAAGCTAGTCAAATAAATGCCAGCAAAGGAACAGCAGCGAGTCAAAGAGCCTTTAATGCACTTAGACTTATAGTTACTATA LLTVPLQIVEFYLILAAIAVVKSSLFWRLLIASVIMLVAGYLGEVGSVNVWAGFVVGMLGWLYIIYEVFAGEASQINASKGTAASQRAFNALRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTAACAGTACCACTACAAATAGTTGAGTTTTATCTAATACTAGCTGCA---------ATT---GCTGTAGTTAAATCA---TCATTA------------------------------------TTTTGGAGA---TTATTGATAGCTTCAGTAATTATGCTTGTAGCAGGGTATTTAGGTGAA---------GTT------------------GGA------TCT---------------------------------GTT------------------------------------------------------------------AATGTT------------------TGGGCTGGT---TTTGTAGTTGGAATGCTTGGATGGCTTTACATCATATATGAAGTA---------------TTT------GCA---GGAGAAGCTAGTCAAATAAATGCCAGC------AAA---GGAACAGCAGCGAGT---CAA---AGA---GCC---TTT---AAT---GCACTT---AGACTTATAGTTACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVKS-SL------------FWR-LLIASVIMLVAGYLGE---V------G--S-----------V----------------------NV------WAG-FVVGMLGWLYIIYEV-----F--A-GEASQINAS--K-GTAAS-Q-R-A-F-N-AL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ928907 [unk-Proteo2] PRGD_OTU060_94d94abbed2e281346871ae00021b210 gb|KJ928907| PRGD_OTU060_94d94abbed2e281346871ae00021b210, putative proteorhodopsin gene, partial cds. PRGD_OTU060_94d94abbed2e281346871ae00021b210, putative proteorhodopsin gene, partial cds. KJ928907 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTTTTAACAGTACCACTACAAATAGTTGAGTTTTATCTGATACTAGCTGCAATTGCTGTAGTTAAATCATCATTATTTTGGAGATTATTGATAGCTTCAGTAATTATGCTTGTAGCAGGATATTTAGGTGAAGTTGGATCTGTAAATGTTTGGGCTGGTTTCGTAGTTGGAATGCTTGGATGGCTTTACATCATATATGAAGTATTTGCAGGAGAAGCTAGTCAGATAAATGCCAGTAAAGGAACAGCAGCAAGTCAAAGAGCCTTTAATGCACTAAGACTTATAGTTACTATT LLTVPLQIVEFYLILAAIAVVKSSLFWRLLIASVIMLVAGYLGEVGSVNVWAGFVVGMLGWLYIIYEVFAGEASQINASKGTAASQRAFNALRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTAACAGTACCACTACAAATAGTTGAGTTTTATCTGATACTAGCTGCA---------ATT---GCTGTAGTTAAATCA---TCATTA------------------------------------TTTTGGAGA---TTATTGATAGCTTCAGTAATTATGCTTGTAGCAGGATATTTAGGTGAA---------GTT------------------GGA------TCT---------------------------------GTA------------------------------------------------------------------AATGTT------------------TGGGCTGGT---TTCGTAGTTGGAATGCTTGGATGGCTTTACATCATATATGAAGTA---------------TTT------GCA---GGAGAAGCTAGTCAGATAAATGCCAGT------AAA---GGAACAGCAGCAAGT---CAA---AGA---GCC---TTT---AAT---GCACTA---AGACTTATAGTTACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVKS-SL------------FWR-LLIASVIMLVAGYLGE---V------G--S-----------V----------------------NV------WAG-FVVGMLGWLYIIYEV-----F--A-GEASQINAS--K-GTAAS-Q-R-A-F-N-AL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ928901 [unk-Proteo2] PRGD_OTU060_otuREP_8faa90d1385c0860a24b350a3b9ffecf gb|KJ928901| PRGD_OTU060_otuREP_8faa90d1385c0860a24b350a3b9ffecf, putative proteorhodopsin gene, partial cds. PRGD_OTU060_otuREP_8faa90d1385c0860a24b350a3b9ffecf, putative proteorhodopsin gene, partial cds. KJ928901 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTTTTAACAGTGCCACTACAAATAGTTGAGTTTTATCTAATACTAGCTGCAATTGCTGTAGTTAAATCATCATTATTTTGGAGATTATTGATAGCTTCAGTAATTATGCTTGTAGCAGGATATTTAGGTGAAGTTGGATCTGTAAATGTTTGGGCTGGTTTTGTAGTTGGAATGCTTGGATGGCTTTACATCATATATGAAGTATTTGCAGGAGAAGCTAGTCAGATAAATGCCAGCAAAGGAACAGCAGCAAGTCAAAGAGCCTTTAATGCACTTAGACTTATAGTTACTATA LLTVPLQIVEFYLILAAIAVVKSSLFWRLLIASVIMLVAGYLGEVGSVNVWAGFVVGMLGWLYIIYEVFAGEASQINASKGTAASQRAFNALRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTAACAGTGCCACTACAAATAGTTGAGTTTTATCTAATACTAGCTGCA---------ATT---GCTGTAGTTAAATCA---TCATTA------------------------------------TTTTGGAGA---TTATTGATAGCTTCAGTAATTATGCTTGTAGCAGGATATTTAGGTGAA---------GTT------------------GGA------TCT---------------------------------GTA------------------------------------------------------------------AATGTT------------------TGGGCTGGT---TTTGTAGTTGGAATGCTTGGATGGCTTTACATCATATATGAAGTA---------------TTT------GCA---GGAGAAGCTAGTCAGATAAATGCCAGC------AAA---GGAACAGCAGCAAGT---CAA---AGA---GCC---TTT---AAT---GCACTT---AGACTTATAGTTACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVKS-SL------------FWR-LLIASVIMLVAGYLGE---V------G--S-----------V----------------------NV------WAG-FVVGMLGWLYIIYEV-----F--A-GEASQINAS--K-GTAAS-Q-R-A-F-N-AL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ928913 [unk-Proteo2] PRGD_OTU060_d23b84b71e526c1d4cb271ae5cd5c718 gb|KJ928913| PRGD_OTU060_d23b84b71e526c1d4cb271ae5cd5c718, putative proteorhodopsin gene, partial cds. PRGD_OTU060_d23b84b71e526c1d4cb271ae5cd5c718, putative proteorhodopsin gene, partial cds. KJ928913 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTTTAACAGTGCCACTACAGATAGTTGAATTTTGCCTAATACTAGCCGCTATTGCTGTAGTTAAATCATCATTATTTTGGAGATTATTGATAGCTTCAGTAATTATGCTTGTAGCAGGATATTTAGGTGAAGTTGGATCTGTAAATGTTTGGGCTGGCTTTGTAGTTGGAATGCTTGGATGGCTTTATATCATATATGAAGTATTTGCAGGAGAAGCTAGTCAGATTAATGCCAGTAAAGGAACAGCAGCGAGTCAAAGAGCCTTTAATGCACTTAGACTTATAGTTACTATA LLTVPLQIVEFCLILAAIAVVKSSLFWRLLIASVIMLVAGYLGEVGSVNVWAGFVVGMLGWLYIIYEVFAGEASQINASKGTAASQRAFNALRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTAACAGTGCCACTACAGATAGTTGAATTTTGCCTAATACTAGCCGCT---------ATT---GCTGTAGTTAAATCA---TCATTA------------------------------------TTTTGGAGA---TTATTGATAGCTTCAGTAATTATGCTTGTAGCAGGATATTTAGGTGAA---------GTT------------------GGA------TCT---------------------------------GTA------------------------------------------------------------------AATGTT------------------TGGGCTGGC---TTTGTAGTTGGAATGCTTGGATGGCTTTATATCATATATGAAGTA---------------TTT------GCA---GGAGAAGCTAGTCAGATTAATGCCAGT------AAA---GGAACAGCAGCGAGT---CAA---AGA---GCC---TTT---AAT---GCACTT---AGACTTATAGTTACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFCLILAA---I-AVVKS-SL------------FWR-LLIASVIMLVAGYLGE---V------G--S-----------V----------------------NV------WAG-FVVGMLGWLYIIYEV-----F--A-GEASQINAS--K-GTAAS-Q-R-A-F-N-AL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ928904 [unk-Proteo2] PRGD_OTU060_32c3d00dc03c5d12e3afc43ce5e8200e gb|KJ928904| PRGD_OTU060_32c3d00dc03c5d12e3afc43ce5e8200e, putative proteorhodopsin gene, partial cds. PRGD_OTU060_32c3d00dc03c5d12e3afc43ce5e8200e, putative proteorhodopsin gene, partial cds. KJ928904 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTTTTAACAGTTCCACTGCAAATAGTTGAGTTTTATTTAATACTAGCTGCAATTGCTGTAGTTAAATCATCATTATTTTGGAGATTATTGATAGCTTCAGTTATTATGCTTGTAGCAGGATATTTAGGTGAAGTTGGATCTGTAAATGTTTGGGCTGGGTTTGTAGTTGGAATGCTTGGATGGCTTTACATCATATATGAAGTATTTGCAGGCGAAGCTAGTCAAATAAATGCCAGCAAAGGAACAGCAGCTAGCCAAAGAGCCTTTAATGCTCTTAGGCTTATAGTAACTATA LLTVPLQIVEFYLILAAIAVVKSSLFWRLLIASVIMLVAGYLGEVGSVNVWAGFVVGMLGWLYIIYEVFAGEASQINASKGTAASQRAFNALRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTAACAGTTCCACTGCAAATAGTTGAGTTTTATTTAATACTAGCTGCA---------ATT---GCTGTAGTTAAATCA---TCATTA------------------------------------TTTTGGAGA---TTATTGATAGCTTCAGTTATTATGCTTGTAGCAGGATATTTAGGTGAA---------GTT------------------GGA------TCT---------------------------------GTA------------------------------------------------------------------AATGTT------------------TGGGCTGGG---TTTGTAGTTGGAATGCTTGGATGGCTTTACATCATATATGAAGTA---------------TTT------GCA---GGCGAAGCTAGTCAAATAAATGCCAGC------AAA---GGAACAGCAGCTAGC---CAA---AGA---GCC---TTT---AAT---GCTCTT---AGGCTTATAGTAACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVKS-SL------------FWR-LLIASVIMLVAGYLGE---V------G--S-----------V----------------------NV------WAG-FVVGMLGWLYIIYEV-----F--A-GEASQINAS--K-GTAAS-Q-R-A-F-N-AL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ928911 [unk-Proteo2] PRGD_OTU060_c625a6d200b996e3976112f004c40431 gb|KJ928911| PRGD_OTU060_c625a6d200b996e3976112f004c40431, putative proteorhodopsin gene, partial cds. PRGD_OTU060_c625a6d200b996e3976112f004c40431, putative proteorhodopsin gene, partial cds. KJ928911 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTTTTAACAGTGCCTTTACAAATAGTTGAGTTTTATTTAATACTAGCTGCAATTGCTGTAGTTAAATCATCATTATTTTGGAGATTATTGATAGCTTCAGTAATTATGCTCGTAGCAGGATATTTAGGTGAAGTTGGATCTGTAAATGTTTGGGCTGGCTTTGTAGTTGGAATGCTTGGATGGCTTTATATCATATATGAAGTATTTGCAGGAGAAGCTAGTCAAATAAATGCCAGCAAAGGAACAGCAGCAAGTCAAAAAGCGTTTAATGCTCTTAGGCTTATAGTGACTATA LLTVPLQIVEFYLILAAIAVVKSSLFWRLLIASVIMLVAGYLGEVGSVNVWAGFVVGMLGWLYIIYEVFAGEASQINASKGTAASQKAFNALRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTAACAGTGCCTTTACAAATAGTTGAGTTTTATTTAATACTAGCTGCA---------ATT---GCTGTAGTTAAATCA---TCATTA------------------------------------TTTTGGAGA---TTATTGATAGCTTCAGTAATTATGCTCGTAGCAGGATATTTAGGTGAA---------GTT------------------GGA------TCT---------------------------------GTA------------------------------------------------------------------AATGTT------------------TGGGCTGGC---TTTGTAGTTGGAATGCTTGGATGGCTTTATATCATATATGAAGTA---------------TTT------GCA---GGAGAAGCTAGTCAAATAAATGCCAGC------AAA---GGAACAGCAGCAAGT---CAA---AAA---GCG---TTT---AAT---GCTCTT---AGGCTTATAGTGACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVKS-SL------------FWR-LLIASVIMLVAGYLGE---V------G--S-----------V----------------------NV------WAG-FVVGMLGWLYIIYEV-----F--A-GEASQINAS--K-GTAAS-Q-K-A-F-N-AL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ928903 [unk-Proteo2] PRGD_OTU060_2b0d9938134582f59776fd7a68329c7c gb|KJ928903| PRGD_OTU060_2b0d9938134582f59776fd7a68329c7c, putative proteorhodopsin gene, partial cds. PRGD_OTU060_2b0d9938134582f59776fd7a68329c7c, putative proteorhodopsin gene, partial cds. KJ928903 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175; 33.935, 18.508) CTTTTAACAGTGCCACTACAAATAGTAGAGTTTTATTTAATACTAGCTGCAATTGCTGTAGTTAAATCATCATTATTTTGGAGATTATTGATAGCTTCAGTAATTATGCTTGTTGCAGGTTATTTAGGTGAAGTTGGATCTGTGAATGTTTGGGCTGGTTTTGTAGTTGGAATGCTTGGATGGCTTTACATCATATATGAAGTATTTGCAGGAGAAGCTAGTCAAATAAATGCCAGCAAAGGGACAGCAGCAAGTCAAAGAGCCTTTAATGCTCTTAGGCTTATAGTCACCATA LLTVPLQIVEFYLILAAIAVVKSSLFWRLLIASVIMLVAGYLGEVGSVNVWAGFVVGMLGWLYIIYEVFAGEASQINASKGTAASQRAFNALRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTAACAGTGCCACTACAAATAGTAGAGTTTTATTTAATACTAGCTGCA---------ATT---GCTGTAGTTAAATCA---TCATTA------------------------------------TTTTGGAGA---TTATTGATAGCTTCAGTAATTATGCTTGTTGCAGGTTATTTAGGTGAA---------GTT------------------GGA------TCT---------------------------------GTG------------------------------------------------------------------AATGTT------------------TGGGCTGGT---TTTGTAGTTGGAATGCTTGGATGGCTTTACATCATATATGAAGTA---------------TTT------GCA---GGAGAAGCTAGTCAAATAAATGCCAGC------AAA---GGGACAGCAGCAAGT---CAA---AGA---GCC---TTT---AAT---GCTCTT---AGGCTTATAGTCACCATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVKS-SL------------FWR-LLIASVIMLVAGYLGE---V------G--S-----------V----------------------NV------WAG-FVVGMLGWLYIIYEV-----F--A-GEASQINAS--K-GTAAS-Q-R-A-F-N-AL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ928915 [unk-Proteo2] PRGD_OTU060_e493ab3f9d66efaa8cd114aad826b87a gb|KJ928915| PRGD_OTU060_e493ab3f9d66efaa8cd114aad826b87a, putative proteorhodopsin gene, partial cds. PRGD_OTU060_e493ab3f9d66efaa8cd114aad826b87a, putative proteorhodopsin gene, partial cds. KJ928915 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTTTAACAGTGCCACTACAAATAGTAGAGTTTTATTTAATACTAGCTGCAATTGCTGTAGTTAAATCATCATTATTTTGGAGATTATTGATAGCTTCAGTAATTATGCTTGTTGCAGGTTATTTAGGTGAAGTTGGATCTGTGAATGTTTGGGCTGGTTTTGTAGTTGGAATGCTTGGATGGCTTTACATCATATATGAAGTATTTGCAGGAGAAGCTAGTCAAATAAATGCCAGCAAAGGAACAGCAGCAAGTCAAAAAGCCTTTAATGCTCTTAGGCTTATAGTCACCATA LLTVPLQIVEFYLILAAIAVVKSSLFWRLLIASVIMLVAGYLGEVGSVNVWAGFVVGMLGWLYIIYEVFAGEASQINASKGTAASQKAFNALRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTAACAGTGCCACTACAAATAGTAGAGTTTTATTTAATACTAGCTGCA---------ATT---GCTGTAGTTAAATCA---TCATTA------------------------------------TTTTGGAGA---TTATTGATAGCTTCAGTAATTATGCTTGTTGCAGGTTATTTAGGTGAA---------GTT------------------GGA------TCT---------------------------------GTG------------------------------------------------------------------AATGTT------------------TGGGCTGGT---TTTGTAGTTGGAATGCTTGGATGGCTTTACATCATATATGAAGTA---------------TTT------GCA---GGAGAAGCTAGTCAAATAAATGCCAGC------AAA---GGAACAGCAGCAAGT---CAA---AAA---GCC---TTT---AAT---GCTCTT---AGGCTTATAGTCACCATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVKS-SL------------FWR-LLIASVIMLVAGYLGE---V------G--S-----------V----------------------NV------WAG-FVVGMLGWLYIIYEV-----F--A-GEASQINAS--K-GTAAS-Q-K-A-F-N-AL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ928905 [unk-Proteo2] PRGD_OTU060_43411fb3ec32004e99798a26947a2893 gb|KJ928905| PRGD_OTU060_43411fb3ec32004e99798a26947a2893, putative proteorhodopsin gene, partial cds. PRGD_OTU060_43411fb3ec32004e99798a26947a2893, putative proteorhodopsin gene, partial cds. KJ928905 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Indian Ocean (-33.28, 45.35) CTACTAACAGTACCTTTACAAATAGTTGAATTCTATCTTATATTAGCAGCTATTGCCGTTGTAAAATCATCATTATTCTGGAGACTACTAATAGCTTCAGTAATAATGTTAGTTGCAGGTTATTTAGGAGAAGTAGGATCAGTTAATGTATGGGCTGGTTTTGTAGTTGGAATGCTTGGATGGATTTATATTATCTATGAAGTATTTGCAGGAGAAGCAAGCCAAATAAATGCTAGTAAAGGAACAGCAGCAAGTCAAAAAGCTTTTAACGCTTTAAGACTTATAGTAACTGTT LLTVPLQIVEFYLILAAIAVVKSSLFWRLLIASVIMLVAGYLGEVGSVNVWAGFVVGMLGWIYIIYEVFAGEASQINASKGTAASQKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTAACAGTACCTTTACAAATAGTTGAATTCTATCTTATATTAGCAGCT---------ATT---GCCGTTGTAAAATCA---TCATTA------------------------------------TTCTGGAGA---CTACTAATAGCTTCAGTAATAATGTTAGTTGCAGGTTATTTAGGAGAA---------GTA------------------GGA------TCA---------------------------------GTT------------------------------------------------------------------AATGTA------------------TGGGCTGGT---TTTGTAGTTGGAATGCTTGGATGGATTTATATTATCTATGAAGTA---------------TTT------GCA---GGAGAAGCAAGCCAAATAAATGCTAGT------AAA---GGAACAGCAGCAAGT---CAA---AAA---GCT---TTT---AAC---GCTTTA---AGACTTATAGTAACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVKS-SL------------FWR-LLIASVIMLVAGYLGE---V------G--S-----------V----------------------NV------WAG-FVVGMLGWIYIIYEV-----F--A-GEASQINAS--K-GTAAS-Q-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ928910 [unk-Proteo2] PRGD_OTU060_c01d20aa8081fdc0ee4900065f292e32 gb|KJ928910| PRGD_OTU060_c01d20aa8081fdc0ee4900065f292e32, putative proteorhodopsin gene, partial cds. PRGD_OTU060_c01d20aa8081fdc0ee4900065f292e32, putative proteorhodopsin gene, partial cds. KJ928910 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTTCTTACCGTACCTCTACAAATAGTTGAGTTTTACCTAATACTAGCTGCGATAGCTGTAGTTAAATCATCTTTATTCTGGAGATTGCTAATTGCATCTGTGATTATGTTAGTTGCAGGCTATTTAGGAGAAGTTGGTTCAGTTAACGTTTGGGCCGGTTTTATAGTAGGTATGTTAGGATGGCTTTACATTATCTATGAAGTGTTTGCTGGAGAAGCCAGTCAAATAAACGCTAGTAAAGGAACTGCAGCTAGTCAAAGAGCATTTAACGCTTTAAGACTAATTGTTACAATT LLTVPLQIVEFYLILAAIAVVKSSLFWRLLIASVIMLVAGYLGEVGSVNVWAGFIVGMLGWLYIIYEVFAGEASQINASKGTAASQRAFNALRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTTACCGTACCTCTACAAATAGTTGAGTTTTACCTAATACTAGCTGCG---------ATA---GCTGTAGTTAAATCA---TCTTTA------------------------------------TTCTGGAGA---TTGCTAATTGCATCTGTGATTATGTTAGTTGCAGGCTATTTAGGAGAA---------GTT------------------GGT------TCA---------------------------------GTT------------------------------------------------------------------AACGTT------------------TGGGCCGGT---TTTATAGTAGGTATGTTAGGATGGCTTTACATTATCTATGAAGTG---------------TTT------GCT---GGAGAAGCCAGTCAAATAAACGCTAGT------AAA---GGAACTGCAGCTAGT---CAA---AGA---GCA---TTT---AAC---GCTTTA---AGACTAATTGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVKS-SL------------FWR-LLIASVIMLVAGYLGE---V------G--S-----------V----------------------NV------WAG-FIVGMLGWLYIIYEV-----F--A-GEASQINAS--K-GTAAS-Q-R-A-F-N-AL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ928908 [unk-Proteo2] PRGD_OTU060_a67cb476a5b603d0321a98cea7561ba9 gb|KJ928908| PRGD_OTU060_a67cb476a5b603d0321a98cea7561ba9, putative proteorhodopsin gene, partial cds. PRGD_OTU060_a67cb476a5b603d0321a98cea7561ba9, putative proteorhodopsin gene, partial cds. KJ928908 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTATTAACAGTGCCTCTACAAATTATAGAGTTTTACTTAATCTTAGCGGCTATTGCTGTAGTTAAGTCTTCATTGTTCTGGAGGCTATTAATTGCATCAGTGATTATGCTTGTTGCAGGATATTTAGGAGAGATAGGTTCTGTTAACGTATGGGTAGGTTTCATAGTAGGTATGCTAGGATGGTTATACATTATTTATGAAATATTTGCTGGTGAAGCAAGCCAAATTAACGCTAGTAAAGGAACAGCTGCAAGTCAAAGAGCTTTTAATGCCCTTAGATTAGTTGTTACTATT LLTVPLQIIEFYLILAAIAVVKSSLFWRLLIASVIMLVAGYLGEIGSVNVWVGFIVGMLGWLYIIYEIFAGEASQINASKGTAASQRAFNALRLVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACAGTGCCTCTACAAATTATAGAGTTTTACTTAATCTTAGCGGCT---------ATT---GCTGTAGTTAAGTCT---TCATTG------------------------------------TTCTGGAGG---CTATTAATTGCATCAGTGATTATGCTTGTTGCAGGATATTTAGGAGAG---------ATA------------------GGT------TCT---------------------------------GTT------------------------------------------------------------------AACGTA------------------TGGGTAGGT---TTCATAGTAGGTATGCTAGGATGGTTATACATTATTTATGAAATA---------------TTT------GCT---GGTGAAGCAAGCCAAATTAACGCTAGT------AAA---GGAACAGCTGCAAGT---CAA---AGA---GCT---TTT---AAT---GCCCTT---AGATTAGTTGTTACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVKS-SL------------FWR-LLIASVIMLVAGYLGE---I------G--S-----------V----------------------NV------WVG-FIVGMLGWLYIIYEI-----F--A-GEASQINAS--K-GTAAS-Q-R-A-F-N-AL-RLVVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ928914 [unk-Proteo2] PRGD_OTU060_d6c2f95b8d277717425f63daca87d451 gb|KJ928914| PRGD_OTU060_d6c2f95b8d277717425f63daca87d451, putative proteorhodopsin gene, partial cds. PRGD_OTU060_d6c2f95b8d277717425f63daca87d451, putative proteorhodopsin gene, partial cds. KJ928914 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGTTAACAGTACCATTACAAATTATAGAATTTTACTTAATTCTAGCTGCAATAGCGGTTGTAAAGTCATCATTATTCTGGAGGCTGCTAATTGCTTCTGTAATAATGCTGGTAGCTGGTTATTTAGGTGAAGTAGGTTCTGTTAATGTCTGGGCTGGCTTTGTAGTTGGAATGCTAGCATGGTTATACATTATCTATGAAATATTTGCTGGTGAAGCTAGCCAAATTAATGCAAGCAAAGGTACTGCTGCTAGCCAAAAAGCCTTTAATGCATTAAGACTGATTGTTACAATT LLTVPLQIIEFYLILAAIAVVKSSLFWRLLIASVIMLVAGYLGEVGSVNVWAGFVVGMLAWLYIIYEIFAGEASQINASKGTAASQKAFNALRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTAACAGTACCATTACAAATTATAGAATTTTACTTAATTCTAGCTGCA---------ATA---GCGGTTGTAAAGTCA---TCATTA------------------------------------TTCTGGAGG---CTGCTAATTGCTTCTGTAATAATGCTGGTAGCTGGTTATTTAGGTGAA---------GTA------------------GGT------TCT---------------------------------GTT------------------------------------------------------------------AATGTC------------------TGGGCTGGC---TTTGTAGTTGGAATGCTAGCATGGTTATACATTATCTATGAAATA---------------TTT------GCT---GGTGAAGCTAGCCAAATTAATGCAAGC------AAA---GGTACTGCTGCTAGC---CAA---AAA---GCC---TTT---AAT---GCATTA---AGACTGATTGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVKS-SL------------FWR-LLIASVIMLVAGYLGE---V------G--S-----------V----------------------NV------WAG-FVVGMLAWLYIIYEI-----F--A-GEASQINAS--K-GTAAS-Q-K-A-F-N-AL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ929209 [unk-Proteo2] PRGD_OTU088_25da006f999293ae036e72caee3607c3 gb|KJ929209| PRGD_OTU088_25da006f999293ae036e72caee3607c3, putative proteorhodopsin gene, partial cds. PRGD_OTU088_25da006f999293ae036e72caee3607c3, putative proteorhodopsin gene, partial cds. KJ929209 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683) CTGTTAACTGTACCGCTACAAATCGTAGAATTTTACTTAATCTTGGCAGCTATCACTGTTGTCCGTGCAGCATTATTTTGGAAGTTATTAGTCGCTTCTATTGTGATGTTAGTCTTCGGCTACTTTGGTGAAGTTGGTGCAATGAGCGTTTGGCCTGCATTTGCGATCGGTATGGCGGGTTGGTTATACATCATCTACGAGATTTTCGTTGGAGAAGCCAGTCAAGTTAATGCTGCATCAGGCTCTGAAGCCAGCCAAACAGCATTCAACGCCTTGCGTTTGATTGTTACTATT LLTVPLQIVEFYLILAAITVVRAALFWKLLVASIVMLVFGYFGEVGAMSVWPAFAIGMAGWLYIIYEIFVGEASQVNAASGSEASQTAFNALRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACTGTACCGCTACAAATCGTAGAATTTTACTTAATCTTGGCAGCT---------ATC---ACTGTTGTCCGTGCA---GCATTA------------------------------------TTTTGGAAG---TTATTAGTCGCTTCTATTGTGATGTTAGTCTTCGGCTACTTTGGTGAA---------GTT------------------GGT------GCA---------------------------------ATG------------------------------------------------------------------AGCGTT------------------TGGCCTGCA---TTTGCGATCGGTATGGCGGGTTGGTTATACATCATCTACGAGATT---------------TTC------GTT---GGAGAAGCCAGTCAAGTTAATGCTGCA------TCA---GGCTCTGAAGCCAGC---CAA---ACA---GCA---TTC---AAC---GCCTTG---CGTTTGATTGTTACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-TVVRA-AL------------FWK-LLVASIVMLVFGYFGE---V------G--A-----------M----------------------SV------WPA-FAIGMAGWLYIIYEI-----F--V-GEASQVNAA--S-GSEAS-Q-T-A-F-N-AL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ929212 [unk-Proteo2] PRGD_OTU088_98787c436b5f1e92bf0d701a3bbca91f gb|KJ929212| PRGD_OTU088_98787c436b5f1e92bf0d701a3bbca91f, putative proteorhodopsin gene, partial cds. PRGD_OTU088_98787c436b5f1e92bf0d701a3bbca91f, putative proteorhodopsin gene, partial cds. KJ929212 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGTTAACTGTACCTCTACAAATTGTTGAATTTTACTTAATCTTGGCAGCTATCACTGTTGTCCGTGCAGCATTATTTTGGAAGTTATTAGTCGCTTCTATTGTGATGTTAGTCTTCGGCTACTTTGGTGAAGTTGGTGCAATGAGCGTTTGGCCTGCATTTGCAATCGGTATGGCGGGATGGTTATACATCATCTACGAGATCTTCGTTGGAGAAGCCAGTCAAGTTAATGCGGCGTCAGGTTCAGAGGCTAGCCAAACAGCTTTCAACGCTTTGCGTTTGATTGTTACTGTT LLTVPLQIVEFYLILAAITVVRAALFWKLLVASIVMLVFGYFGEVGAMSVWPAFAIGMAGWLYIIYEIFVGEASQVNAASGSEASQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACTGTACCTCTACAAATTGTTGAATTTTACTTAATCTTGGCAGCT---------ATC---ACTGTTGTCCGTGCA---GCATTA------------------------------------TTTTGGAAG---TTATTAGTCGCTTCTATTGTGATGTTAGTCTTCGGCTACTTTGGTGAA---------GTT------------------GGT------GCA---------------------------------ATG------------------------------------------------------------------AGCGTT------------------TGGCCTGCA---TTTGCAATCGGTATGGCGGGATGGTTATACATCATCTACGAGATC---------------TTC------GTT---GGAGAAGCCAGTCAAGTTAATGCGGCG------TCA---GGTTCAGAGGCTAGC---CAA---ACA---GCT---TTC---AAC---GCTTTG---CGTTTGATTGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-TVVRA-AL------------FWK-LLVASIVMLVFGYFGE---V------G--A-----------M----------------------SV------WPA-FAIGMAGWLYIIYEI-----F--V-GEASQVNAA--S-GSEAS-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ929208 [unk-Proteo2] PRGD_OTU088_otuREP_eb8b95ee315515f8c2baa83e17cd220e gb|KJ929208| PRGD_OTU088_otuREP_eb8b95ee315515f8c2baa83e17cd220e, putative proteorhodopsin gene, partial cds. PRGD_OTU088_otuREP_eb8b95ee315515f8c2baa83e17cd220e, putative proteorhodopsin gene, partial cds. KJ929208 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) CTGTTAACTGTACCGCTACAAATCGTAGAATTTTACTTAATCTTGGCAGCTATCACTGTTGTCCGTGCAGCATTATTTTGGAAGTTATTAATCGCTTCTATTGTGATGTTAGTATTCGGCTACTTTGGTGAAGTTGGTGCAATGAGCGTTTGGCCTGCATTTGCGATCGGTATGGCGGGCTGGTTATACATCATCTACGAGATTTTCGTTGGAGAAGCCAGTCAAGTGAATGCGGCATCAGGCTCTGAGGCCAGCCAAACAGCATTCAACGCTTTGCGTTTGATTGTTACTATT LLTVPLQIVEFYLILAAITVVRAALFWKLLIASIVMLVFGYFGEVGAMSVWPAFAIGMAGWLYIIYEIFVGEASQVNAASGSEASQTAFNALRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACTGTACCGCTACAAATCGTAGAATTTTACTTAATCTTGGCAGCT---------ATC---ACTGTTGTCCGTGCA---GCATTA------------------------------------TTTTGGAAG---TTATTAATCGCTTCTATTGTGATGTTAGTATTCGGCTACTTTGGTGAA---------GTT------------------GGT------GCA---------------------------------ATG------------------------------------------------------------------AGCGTT------------------TGGCCTGCA---TTTGCGATCGGTATGGCGGGCTGGTTATACATCATCTACGAGATT---------------TTC------GTT---GGAGAAGCCAGTCAAGTGAATGCGGCA------TCA---GGCTCTGAGGCCAGC---CAA---ACA---GCA---TTC---AAC---GCTTTG---CGTTTGATTGTTACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-TVVRA-AL------------FWK-LLIASIVMLVFGYFGE---V------G--A-----------M----------------------SV------WPA-FAIGMAGWLYIIYEI-----F--V-GEASQVNAA--S-GSEAS-Q-T-A-F-N-AL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ929213 [unk-Proteo2] PRGD_OTU088_9cf7707bf9db14cfbbeddbaafbbf6cbd gb|KJ929213| PRGD_OTU088_9cf7707bf9db14cfbbeddbaafbbf6cbd, putative proteorhodopsin gene, partial cds. PRGD_OTU088_9cf7707bf9db14cfbbeddbaafbbf6cbd, putative proteorhodopsin gene, partial cds. KJ929213 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025) CTGTTAACTGTACCGCTACAAATCGTAGAATTTTACTTAATCTTGGCAGCTATTACCGTCGTTCGTGCAGCATTATTTTGGAAGTTATTAGTCGCTTCTATTGTGATGTTAGTCTTCGGCTACTTTGGTGAAGTTGGTGCAATGAGCGTTTGGCCTGCATTTGCGATCGGTATGGCGGGTTGGTTATACATCATCTACGAGATTTTCGTTGGAGAAGCCAGTCAAGTCAATGCGGCATCAGGCTCTGAGGCCAGCCAAACAGCATTCAACGCTTTGCGTTTGATTGTTACTATT LLTVPLQIVEFYLILAAITVVRAALFWKLLVASIVMLVFGYFGEVGAMSVWPAFAIGMAGWLYIIYEIFVGEASQVNAASGSEASQTAFNALRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACTGTACCGCTACAAATCGTAGAATTTTACTTAATCTTGGCAGCT---------ATT---ACCGTCGTTCGTGCA---GCATTA------------------------------------TTTTGGAAG---TTATTAGTCGCTTCTATTGTGATGTTAGTCTTCGGCTACTTTGGTGAA---------GTT------------------GGT------GCA---------------------------------ATG------------------------------------------------------------------AGCGTT------------------TGGCCTGCA---TTTGCGATCGGTATGGCGGGTTGGTTATACATCATCTACGAGATT---------------TTC------GTT---GGAGAAGCCAGTCAAGTCAATGCGGCA------TCA---GGCTCTGAGGCCAGC---CAA---ACA---GCA---TTC---AAC---GCTTTG---CGTTTGATTGTTACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-TVVRA-AL------------FWK-LLVASIVMLVFGYFGE---V------G--A-----------M----------------------SV------WPA-FAIGMAGWLYIIYEI-----F--V-GEASQVNAA--S-GSEAS-Q-T-A-F-N-AL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ929211 [unk-Proteo2] PRGD_OTU088_77fb32cbd21c0bbc8ea79d2b4ffbc000 gb|KJ929211| PRGD_OTU088_77fb32cbd21c0bbc8ea79d2b4ffbc000, putative proteorhodopsin gene, partial cds. PRGD_OTU088_77fb32cbd21c0bbc8ea79d2b4ffbc000, putative proteorhodopsin gene, partial cds. KJ929211 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683) TTGTTAACTGTACCGCTACAAATTGTAGAATTTTACTTAATCTTGGCAGCTATTACCGTCGTTCGTGCAGCATTATTCTGGAAGTTATTAGTAGCTTCTTTGGTTATGTTGATCTTCGGCTACTTTGGTGAAGTCGGTCTTATGAGCGTTTGGCCTGCATTTGCAATTGGTATGGCGGGTTGGTTATACATCATCTATGAAATTTTCGTTGGTGAAGCCAGTCAAGTGAATGCGGCATCAGGCTCTGAAGCCAGCCAAACAGCATTCAACGCATTGCGTTTGATTGTTACTGTT LLTVPLQIVEFYLILAAITVVRAALFWKLLVASLVMLIFGYFGEVGLMSVWPAFAIGMAGWLYIIYEIFVGEASQVNAASGSEASQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTAACTGTACCGCTACAAATTGTAGAATTTTACTTAATCTTGGCAGCT---------ATT---ACCGTCGTTCGTGCA---GCATTA------------------------------------TTCTGGAAG---TTATTAGTAGCTTCTTTGGTTATGTTGATCTTCGGCTACTTTGGTGAA---------GTC------------------GGT------CTT---------------------------------ATG------------------------------------------------------------------AGCGTT------------------TGGCCTGCA---TTTGCAATTGGTATGGCGGGTTGGTTATACATCATCTATGAAATT---------------TTC------GTT---GGTGAAGCCAGTCAAGTGAATGCGGCA------TCA---GGCTCTGAAGCCAGC---CAA---ACA---GCA---TTC---AAC---GCATTG---CGTTTGATTGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-TVVRA-AL------------FWK-LLVASLVMLIFGYFGE---V------G--L-----------M----------------------SV------WPA-FAIGMAGWLYIIYEI-----F--V-GEASQVNAA--S-GSEAS-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ929214 [unk-Proteo2] PRGD_OTU088_a4288aa0ba063d17ccc41433b4c4ac0a gb|KJ929214| PRGD_OTU088_a4288aa0ba063d17ccc41433b4c4ac0a, putative proteorhodopsin gene, partial cds. PRGD_OTU088_a4288aa0ba063d17ccc41433b4c4ac0a, putative proteorhodopsin gene, partial cds. KJ929214 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097) CTGTTAACTGTACCTTTACAAATCGTTGAATTTTACTTAATTCTTGCTGCTATTACCGTCGTTCGTGCTGCATTATTCTGGAAGCTGTTAATTGCTTCTATTGTCATGCTAGTGTTCGGTTATCTCGGTGAAATCGAAGTGATGAGCGTTTGGCCTGCATTTGCAATTGGTATGGCGGGTTGGTTATACATTATTTATGAAATCTTTGTTGGTGAAGCCAGTCAAGTTAACGCGGCATCAGGCTCTGAAGCTAGCCAAACTGCATTCAACGCCTTGCGTTTGATTGTAACTATC LLTVPLQIVEFYLILAAITVVRAALFWKLLIASIVMLVFGYLGEIEVMSVWPAFAIGMAGWLYIIYEIFVGEASQVNAASGSEASQTAFNALRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACTGTACCTTTACAAATCGTTGAATTTTACTTAATTCTTGCTGCT---------ATT---ACCGTCGTTCGTGCT---GCATTA------------------------------------TTCTGGAAG---CTGTTAATTGCTTCTATTGTCATGCTAGTGTTCGGTTATCTCGGTGAA---------ATC------------------GAA------GTG---------------------------------ATG------------------------------------------------------------------AGCGTT------------------TGGCCTGCA---TTTGCAATTGGTATGGCGGGTTGGTTATACATTATTTATGAAATC---------------TTT------GTT---GGTGAAGCCAGTCAAGTTAACGCGGCA------TCA---GGCTCTGAAGCTAGC---CAA---ACT---GCA---TTC---AAC---GCCTTG---CGTTTGATTGTAACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-TVVRA-AL------------FWK-LLIASIVMLVFGYLGE---I------E--V-----------M----------------------SV------WPA-FAIGMAGWLYIIYEI-----F--V-GEASQVNAA--S-GSEAS-Q-T-A-F-N-AL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ929210 [unk-Proteo2] PRGD_OTU088_281cefda50bf06170cee0c835ae9eff3 gb|KJ929210| PRGD_OTU088_281cefda50bf06170cee0c835ae9eff3, putative proteorhodopsin gene, partial cds. PRGD_OTU088_281cefda50bf06170cee0c835ae9eff3, putative proteorhodopsin gene, partial cds. KJ929210 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), English Channel (48.7717, -3.9683) TTGCTAACTGTACCACTACAAATCGTAGAGTTTTACTTAATACTTGCGGCAATTACCGTAGTACGTGCAGCATTATTTTGGAAGTTATTAATAGCTTCTTTGGTTATGTTGATCTTCGGCTACTTTGGAGAAGTCGGTCTTATGGGTGTTTGGCCTGCATTTATCATTGGCATGGCAGGTTGGTTATACATCATTTACGAAATCTTCGTGGGTGAAGCCAGTCAGGTTAATGCTGCGTCAGGTTCTGCTGCTAGCCAAACTGCATTCAATGCTTTGCGTTTAATTGTGACTATT LLTVPLQIVEFYLILAAITVVRAALFWKLLIASLVMLIFGYFGEVGLMGVWPAFIIGMAGWLYIIYEIFVGEASQVNAASGSAASQTAFNALRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTAACTGTACCACTACAAATCGTAGAGTTTTACTTAATACTTGCGGCA---------ATT---ACCGTAGTACGTGCA---GCATTA------------------------------------TTTTGGAAG---TTATTAATAGCTTCTTTGGTTATGTTGATCTTCGGCTACTTTGGAGAA---------GTC------------------GGT------CTT---------------------------------ATG------------------------------------------------------------------GGTGTT------------------TGGCCTGCA---TTTATCATTGGCATGGCAGGTTGGTTATACATCATTTACGAAATC---------------TTC------GTG---GGTGAAGCCAGTCAGGTTAATGCTGCG------TCA---GGTTCTGCTGCTAGC---CAA---ACT---GCA---TTC---AAT---GCTTTG---CGTTTAATTGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-TVVRA-AL------------FWK-LLIASLVMLIFGYFGE---V------G--L-----------M----------------------GV------WPA-FIIGMAGWLYIIYEI-----F--V-GEASQVNAA--S-GSAAS-Q-T-A-F-N-AL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ929215 [unk-Proteo2] PRGD_OTU088_de2c3e37d5555730b6ab44507326d9ed gb|KJ929215| PRGD_OTU088_de2c3e37d5555730b6ab44507326d9ed, putative proteorhodopsin gene, partial cds. PRGD_OTU088_de2c3e37d5555730b6ab44507326d9ed, putative proteorhodopsin gene, partial cds. KJ929215 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGTTAACTGTACCACTGCAAATTGTAGAGTTTTATTTAATCCTTGCGGCGATTACTGTTGTCCGAGCAGCATTATTTTGGAAGCTATTGGTTGCTTCAATTGTGATGTTAGTCTTTGGTTACTTTGGGGAAGTTGGCGCAATGAGCGTTTGGCCTGCATTTGCAATCGGTATGGCAGGTTGGTTATACATTATCTACGAGATCTTCGTTGGAGAAGCCAGTCAAGTAAATGCGGCATCAGGTTCAGAGGCTAGCCAAACAGCTTTCAACGCTTTGCGTTTGATTGTTACTGTT LLTVPLQIVEFYLILAAITVVRAALFWKLLVASIVMLVFGYFGEVGAMSVWPAFAIGMAGWLYIIYEIFVGEASQVNAASGSEASQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTAACTGTACCACTGCAAATTGTAGAGTTTTATTTAATCCTTGCGGCG---------ATT---ACTGTTGTCCGAGCA---GCATTA------------------------------------TTTTGGAAG---CTATTGGTTGCTTCAATTGTGATGTTAGTCTTTGGTTACTTTGGGGAA---------GTT------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------AGCGTT------------------TGGCCTGCA---TTTGCAATCGGTATGGCAGGTTGGTTATACATTATCTACGAGATC---------------TTC------GTT---GGAGAAGCCAGTCAAGTAAATGCGGCA------TCA---GGTTCAGAGGCTAGC---CAA---ACA---GCT---TTC---AAC---GCTTTG---CGTTTGATTGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-TVVRA-AL------------FWK-LLVASIVMLVFGYFGE---V------G--A-----------M----------------------SV------WPA-FAIGMAGWLYIIYEI-----F--V-GEASQVNAA--S-GSEAS-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ929602 [unk-Proteo2] PRGD_OTU166_otuREP_779bdd72c156ee5355a90bf04e0b338e gb|KJ929602| PRGD_OTU166_otuREP_779bdd72c156ee5355a90bf04e0b338e, putative proteorhodopsin gene, partial cds. PRGD_OTU166_otuREP_779bdd72c156ee5355a90bf04e0b338e, putative proteorhodopsin gene, partial cds. KJ929602 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTATTAACCGTTCCACTTCAAATTGTTGAGTTTTACTTGATTCTGGCCGCTATTGCTGTTGTCAGAGCTGCTTTGTTCTGGAAGTTACTAATAGCATCATTGGTTATGCTACTTGGTGGATTCTGGGGAGAAGCTGGATTAACTGATTCAGTATGGCTTGCCTTTGCAATTGGTATGTTGGGTTGGTTATACATCATTTATGAGATTTTTGTTGGTGAGGCTAGCCAAATCAATGCTTCATCTGGTACCGAGGCCAGCCAAACAGCATTTAATGCTTTGAAATGGATTGTTACAGTC LLTVPLQIVEFYLILAAIAVVRAALFWKLLIASLVMLLGGFWGEAGLTDSVWLAFAIGMLGWLYIIYEIFVGEASQINASSGTEASQTAFNALKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACCGTTCCACTTCAAATTGTTGAGTTTTACTTGATTCTGGCCGCT---------ATT---GCTGTTGTCAGAGCT---GCTTTG------------------------------------TTCTGGAAG---TTACTAATAGCATCATTGGTTATGCTACTTGGTGGATTCTGGGGAGAA---------GCT------------------GGA------TTA---------------------------------ACT------------------------------------------------------------------GATTCA---------------GTATGGCTTGCC---TTTGCAATTGGTATGTTGGGTTGGTTATACATCATTTATGAGATT---------------TTT------GTT---GGTGAGGCTAGCCAAATCAATGCTTCA------TCT---GGTACCGAGGCCAGC---CAA---ACA---GCA---TTT---AAT---GCTTTG---AAATGGATTGTTACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LLIASLVMLLGGFWGE---A------G--L-----------T----------------------DS-----VWLA-FAIGMLGWLYIIYEI-----F--V-GEASQINAS--S-GTEAS-Q-T-A-F-N-AL-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ929603 [unk-Proteo2] PRGD_OTU166_b52e69e16b53fec0da253fa6c5e9fefb gb|KJ929603| PRGD_OTU166_b52e69e16b53fec0da253fa6c5e9fefb, putative proteorhodopsin gene, partial cds. PRGD_OTU166_b52e69e16b53fec0da253fa6c5e9fefb, putative proteorhodopsin gene, partial cds. KJ929603 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTATTAACCGTTCCACTTCAAATTGTTGAGTTTTACTTGATACTCGCTGCTATTGCTGTTGTCAGAGCTGCTTTGTTCTGGAAGTTACTTGTAGCTTCATTGGTTATGCTACTTGGTGGTTTCTGGGGAGAAGCTGGATTAACTGATTCAGTATGGCTTGCCTTTGCAATTGGTATGTTGGGTTGGTTATACATCATTTATGAGATTTTCGTTGGTGAGGCTAGCCAAATCAATGCTTCATCTGGTACCGAGGCTAGCCAAACAGCATTTAATGCTTTGAAATGGATTGTTACTGTT LLTVPLQIVEFYLILAAIAVVRAALFWKLLVASLVMLLGGFWGEAGLTDSVWLAFAIGMLGWLYIIYEIFVGEASQINASSGTEASQTAFNALKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACCGTTCCACTTCAAATTGTTGAGTTTTACTTGATACTCGCTGCT---------ATT---GCTGTTGTCAGAGCT---GCTTTG------------------------------------TTCTGGAAG---TTACTTGTAGCTTCATTGGTTATGCTACTTGGTGGTTTCTGGGGAGAA---------GCT------------------GGA------TTA---------------------------------ACT------------------------------------------------------------------GATTCA---------------GTATGGCTTGCC---TTTGCAATTGGTATGTTGGGTTGGTTATACATCATTTATGAGATT---------------TTC------GTT---GGTGAGGCTAGCCAAATCAATGCTTCA------TCT---GGTACCGAGGCTAGC---CAA---ACA---GCA---TTT---AAT---GCTTTG---AAATGGATTGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LLVASLVMLLGGFWGE---A------G--L-----------T----------------------DS-----VWLA-FAIGMLGWLYIIYEI-----F--V-GEASQINAS--S-GTEAS-Q-T-A-F-N-AL-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ929604 [unk-Proteo2] PRGD_OTU166_fc29f1aafbdc5d282e3f0478b6085c4c gb|KJ929604| PRGD_OTU166_fc29f1aafbdc5d282e3f0478b6085c4c, putative proteorhodopsin gene, partial cds. PRGD_OTU166_fc29f1aafbdc5d282e3f0478b6085c4c, putative proteorhodopsin gene, partial cds. KJ929604 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGTTAACTGTTCCTCTTCAAATTGTTGAGTTTTATTTAATCTTGGCTGCAATTGCTGTTGTCCGAGCTGCATTATTTTGGAAGTTACTTGTAGCATCATTGGTTATGCTACTTGGCGGATTCTGGGGTGAGGCAGGCCTAACTGATTCTGTGTGGCTTGCCTTCGCGATCGGCATGTTGGGTTGGTTATACATCATCTACGAAATTTTCGTTGGTGAGGCCAGCCAAATAAATGCTTCATCTGGTACTGAAGCTAGCCAAACTGCTTTTAATGCCTTGAAATGGATTGTTACAGTT LLTVPLQIVEFYLILAAIAVVRAALFWKLLVASLVMLLGGFWGEAGLTDSVWLAFAIGMLGWLYIIYEIFVGEASQINASSGTEASQTAFNALKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACTGTTCCTCTTCAAATTGTTGAGTTTTATTTAATCTTGGCTGCA---------ATT---GCTGTTGTCCGAGCT---GCATTA------------------------------------TTTTGGAAG---TTACTTGTAGCATCATTGGTTATGCTACTTGGCGGATTCTGGGGTGAG---------GCA------------------GGC------CTA---------------------------------ACT------------------------------------------------------------------GATTCT---------------GTGTGGCTTGCC---TTCGCGATCGGCATGTTGGGTTGGTTATACATCATCTACGAAATT---------------TTC------GTT---GGTGAGGCCAGCCAAATAAATGCTTCA------TCT---GGTACTGAAGCTAGC---CAA---ACT---GCT---TTT---AAT---GCCTTG---AAATGGATTGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVRA-AL------------FWK-LLVASLVMLLGGFWGE---A------G--L-----------T----------------------DS-----VWLA-FAIGMLGWLYIIYEI-----F--V-GEASQINAS--S-GTEAS-Q-T-A-F-N-AL-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-ARCTIC32A02]_KJ928713 [unk-Proteo2-ARCTIC32A02] PRGD_OTU048_c09a8ac36538e52e4274b511b87417a9 gb|KJ928713| PRGD_OTU048_c09a8ac36538e52e4274b511b87417a9, putative proteorhodopsin gene, partial cds. PRGD_OTU048_c09a8ac36538e52e4274b511b87417a9, putative proteorhodopsin gene, partial cds. KJ928713 [[proteorhodopsin/Proteobacterial-like cluster 2/EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTATTAACAGTACCACTACAAATTGTTGAATTTTATTTGATACTTGCAGCTATTGCAGTTGTAGCTGTTTCTGTATTCTGGAGACTTTTAGTAGCATCCATTGTGATGTTAGTTGGTGGTTACCTTGGTGAAGTCGGAACAATAGGTTATTGGGCTGGTTTCATAATAGGGATGGCGGGTTGGATATATATTATCTATGAAGTATTCGCCGGTGAAGCAAGTCAAATTAGTGCAAGTAAAGGTACAGCAGCAAGTAAGAAGGCCTTTAATGCATTACGACTTATTGTGACTGTT LLTVPLQIVEFYLILAAIAVVAVSVFWRLLVASIVMLVGGYLGEVGTIGYWAGFIIGMAGWIYIIYEVFAGEASQISASKGTAASKKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACAGTACCACTACAAATTGTTGAATTTTATTTGATACTTGCAGCT---------ATT---GCAGTTGTAGCTGTT---TCTGTA------------------------------------TTCTGGAGA---CTTTTAGTAGCATCCATTGTGATGTTAGTTGGTGGTTACCTTGGTGAA---------GTC------------------GGA------ACA---------------------------------ATA------------------------------------------------------------------GGTTAT------------------TGGGCTGGT---TTCATAATAGGGATGGCGGGTTGGATATATATTATCTATGAAGTA---------------TTC------GCC---GGTGAAGCAAGTCAAATTAGTGCAAGT------AAA---GGTACAGCAGCAAGT---AAG---AAG---GCC---TTT---AAT---GCATTA---CGACTTATTGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVAV-SV------------FWR-LLVASIVMLVGGYLGE---V------G--T-----------I----------------------GY------WAG-FIIGMAGWIYIIYEV-----F--A-GEASQISAS--K-GTAAS-K-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-ARCTIC32A02]_KJ928718 [unk-Proteo2-ARCTIC32A02] PRGD_OTU048_e873162fb146d6ace65013f4e45b00e4 gb|KJ928718| PRGD_OTU048_e873162fb146d6ace65013f4e45b00e4, putative proteorhodopsin gene, partial cds. PRGD_OTU048_e873162fb146d6ace65013f4e45b00e4, putative proteorhodopsin gene, partial cds. KJ928718 [[proteorhodopsin/Proteobacterial-like cluster 2/EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) TTATTAACAGTACCACTACAAATTGTTGAATTTTATTTGATACTTGCAGCTATTGCAGTTGTAGCTGTCTCTGTATTTTGGAGACTTTTAGTAGCATCCATTGTGATGTTAGTTGGTGGTTACCTTGGTGAAGTTGGAACAATAGGTTATTGGGCTGGTTTCATAATAGGGATGGCGGGTTGGATATATATTATCTATGAAGTATTCGCCGGTGAAGCAAGTCAAATTAGTGCAAGCAAAGGTACAGCAGCAAGTAAGAAAGCCTTTAATGCATTACGACTTATTGTGACTGTT LLTVPLQIVEFYLILAAIAVVAVSVFWRLLVASIVMLVGGYLGEVGTIGYWAGFIIGMAGWIYIIYEVFAGEASQISASKGTAASKKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACAGTACCACTACAAATTGTTGAATTTTATTTGATACTTGCAGCT---------ATT---GCAGTTGTAGCTGTC---TCTGTA------------------------------------TTTTGGAGA---CTTTTAGTAGCATCCATTGTGATGTTAGTTGGTGGTTACCTTGGTGAA---------GTT------------------GGA------ACA---------------------------------ATA------------------------------------------------------------------GGTTAT------------------TGGGCTGGT---TTCATAATAGGGATGGCGGGTTGGATATATATTATCTATGAAGTA---------------TTC------GCC---GGTGAAGCAAGTCAAATTAGTGCAAGC------AAA---GGTACAGCAGCAAGT---AAG---AAA---GCC---TTT---AAT---GCATTA---CGACTTATTGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVAV-SV------------FWR-LLVASIVMLVGGYLGE---V------G--T-----------I----------------------GY------WAG-FIIGMAGWIYIIYEV-----F--A-GEASQISAS--K-GTAAS-K-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-ARCTIC32A02]_KJ928710 [unk-Proteo2-ARCTIC32A02] PRGD_OTU048_af8825a2f8d44267f5142d802a0ff01f gb|KJ928710| PRGD_OTU048_af8825a2f8d44267f5142d802a0ff01f, putative proteorhodopsin gene, partial cds. PRGD_OTU048_af8825a2f8d44267f5142d802a0ff01f, putative proteorhodopsin gene, partial cds. KJ928710 [[proteorhodopsin/Proteobacterial-like cluster 2/EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTATTAACAGTACCACTACAAATTGTCGAATTTTATTTGATACTTGCAGCTATCGCAGTTGTAGCTGTTTCTGTATTCTGGAGACTTTTAGTAGCATCCATTGTGATGTTAGTTGGTGGTTACCTTGGTGAAGTCGGAACAATAGGTTATTGGGCTGGTTTCATTATAGGGATGGCGGGTTGGATATATATTATCTATGAAGTATTCGCCGGTGAAGCAAGTCAAATTAGTGCAAGCAAAGGTACAGCAGCAAGTAAAAAGGCCTTTAATGCATTACGACTTATTGTGACTGTT LLTVPLQIVEFYLILAAIAVVAVSVFWRLLVASIVMLVGGYLGEVGTIGYWAGFIIGMAGWIYIIYEVFAGEASQISASKGTAASKKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACAGTACCACTACAAATTGTCGAATTTTATTTGATACTTGCAGCT---------ATC---GCAGTTGTAGCTGTT---TCTGTA------------------------------------TTCTGGAGA---CTTTTAGTAGCATCCATTGTGATGTTAGTTGGTGGTTACCTTGGTGAA---------GTC------------------GGA------ACA---------------------------------ATA------------------------------------------------------------------GGTTAT------------------TGGGCTGGT---TTCATTATAGGGATGGCGGGTTGGATATATATTATCTATGAAGTA---------------TTC------GCC---GGTGAAGCAAGTCAAATTAGTGCAAGC------AAA---GGTACAGCAGCAAGT---AAA---AAG---GCC---TTT---AAT---GCATTA---CGACTTATTGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVAV-SV------------FWR-LLVASIVMLVGGYLGE---V------G--T-----------I----------------------GY------WAG-FIIGMAGWIYIIYEV-----F--A-GEASQISAS--K-GTAAS-K-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-ARCTIC32A02]_KJ928715 [unk-Proteo2-ARCTIC32A02] PRGD_OTU048_d8298af7b6e8da1ba20627e10f36e4bf gb|KJ928715| PRGD_OTU048_d8298af7b6e8da1ba20627e10f36e4bf, putative proteorhodopsin gene, partial cds. PRGD_OTU048_d8298af7b6e8da1ba20627e10f36e4bf, putative proteorhodopsin gene, partial cds. KJ928715 [[proteorhodopsin/Proteobacterial-like cluster 2/EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTATTAACAGTACCACTACAAATTGTCGAATTTTATTTGATACTTGCAGCTATTGCAGTTGTAGCTGTTTCTGTATTCTGGAGACTTTTAGTAGCATCCATTGTGATGCTAGTTGGTGGTTACCTTGGTGAAGTCGGAACAATAGGTTATTGGGCTGGTTTCATTATAGGGATGGCGGGTTGGATATATATTATCTATGAAGTATTCGCCGGTGAAGCAAGTCAAATTAGTGCAAGTAAAGGTACAGCAGCAAGTAAGAAAGCCTTTAATGCATTACGACTTATTGTGACTGTT LLTVPLQIVEFYLILAAIAVVAVSVFWRLLVASIVMLVGGYLGEVGTIGYWAGFIIGMAGWIYIIYEVFAGEASQISASKGTAASKKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACAGTACCACTACAAATTGTCGAATTTTATTTGATACTTGCAGCT---------ATT---GCAGTTGTAGCTGTT---TCTGTA------------------------------------TTCTGGAGA---CTTTTAGTAGCATCCATTGTGATGCTAGTTGGTGGTTACCTTGGTGAA---------GTC------------------GGA------ACA---------------------------------ATA------------------------------------------------------------------GGTTAT------------------TGGGCTGGT---TTCATTATAGGGATGGCGGGTTGGATATATATTATCTATGAAGTA---------------TTC------GCC---GGTGAAGCAAGTCAAATTAGTGCAAGT------AAA---GGTACAGCAGCAAGT---AAG---AAA---GCC---TTT---AAT---GCATTA---CGACTTATTGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVAV-SV------------FWR-LLVASIVMLVGGYLGE---V------G--T-----------I----------------------GY------WAG-FIIGMAGWIYIIYEV-----F--A-GEASQISAS--K-GTAAS-K-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-ARCTIC32A02]_KJ928705 [unk-Proteo2-ARCTIC32A02] PRGD_OTU048_329e8cb4d7a74f468b2ef4b2caad5af9 gb|KJ928705| PRGD_OTU048_329e8cb4d7a74f468b2ef4b2caad5af9, putative proteorhodopsin gene, partial cds. PRGD_OTU048_329e8cb4d7a74f468b2ef4b2caad5af9, putative proteorhodopsin gene, partial cds. KJ928705 [[proteorhodopsin/Proteobacterial-like cluster 2/EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTATTAACAGTACCACTACAAATTGTCGAATTTTATTTGATACTTGCAGCTATTGCAGTTGTAGCTGTTTCAGTATTCTGGAGACTTTTAATAGCATCCATTGTGATGTTAGTTGGTGGTTATCTTGGTGAAGTCGGAACAATAAATATATGGCTTGGGTTCGTTATAGGGATGGCGGGTTGGTTATACATTATCTATGAAGTATTCGCCGGTGAAGCAAGTCAAATTAGTGCAAGTAAAGGTACAGCAGCAAGTAAAACTGCCTTTAATGCATTACGACTTATTGTGACTGTT LLTVPLQIVEFYLILAAIAVVAVSVFWRLLIASIVMLVGGYLGEVGTINIWLGFVIGMAGWLYIIYEVFAGEASQISASKGTAASKTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACAGTACCACTACAAATTGTCGAATTTTATTTGATACTTGCAGCT---------ATT---GCAGTTGTAGCTGTT---TCAGTA------------------------------------TTCTGGAGA---CTTTTAATAGCATCCATTGTGATGTTAGTTGGTGGTTATCTTGGTGAA---------GTC------------------GGA------ACA---------------------------------ATA------------------------------------------------------------------AATATA------------------TGGCTTGGG---TTCGTTATAGGGATGGCGGGTTGGTTATACATTATCTATGAAGTA---------------TTC------GCC---GGTGAAGCAAGTCAAATTAGTGCAAGT------AAA---GGTACAGCAGCAAGT---AAA---ACT---GCC---TTT---AAT---GCATTA---CGACTTATTGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVAV-SV------------FWR-LLIASIVMLVGGYLGE---V------G--T-----------I----------------------NI------WLG-FVIGMAGWLYIIYEV-----F--A-GEASQISAS--K-GTAAS-K-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-ARCTIC32A02]_KJ928708 [unk-Proteo2-ARCTIC32A02] PRGD_OTU048_911f9adc66e22e608eb1bdc94ae2cbe4 gb|KJ928708| PRGD_OTU048_911f9adc66e22e608eb1bdc94ae2cbe4, putative proteorhodopsin gene, partial cds. PRGD_OTU048_911f9adc66e22e608eb1bdc94ae2cbe4, putative proteorhodopsin gene, partial cds. KJ928708 [[proteorhodopsin/Proteobacterial-like cluster 2/EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (73.9992, 19.2097), Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Indian Ocean (-33.28, 45.35) TTATTAACAGTACCACTTCAAATCGTGGAATTCTACTTGATACTTGCAGCTATTGCAGTTGTTGCTGTGTCAGTGTTTTGGCGATTATTAATTGCTTCGGTAGTTATGCTAGTAGGTGGGTATCTTGGTGAAGTAGGGGCAATAGGATATTGGCTCGGTTTCGCTATAGGTATGGTAGGTTGGTTATATATTATCTACGAAGTATTTGCTGGTGAAGCTAGTCAAATTAGTGCAAGTAAAGGAACAGCGGCAAGTAAGACAGCATTCAATGCTTTAAGGCTTATTGTTACTGTT LLTVPLQIVEFYLILAAIAVVAVSVFWRLLIASVVMLVGGYLGEVGAIGYWLGFAIGMVGWLYIIYEVFAGEASQISASKGTAASKTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACAGTACCACTTCAAATCGTGGAATTCTACTTGATACTTGCAGCT---------ATT---GCAGTTGTTGCTGTG---TCAGTG------------------------------------TTTTGGCGA---TTATTAATTGCTTCGGTAGTTATGCTAGTAGGTGGGTATCTTGGTGAA---------GTA------------------GGG------GCA---------------------------------ATA------------------------------------------------------------------GGATAT------------------TGGCTCGGT---TTCGCTATAGGTATGGTAGGTTGGTTATATATTATCTACGAAGTA---------------TTT------GCT---GGTGAAGCTAGTCAAATTAGTGCAAGT------AAA---GGAACAGCGGCAAGT---AAG---ACA---GCA---TTC---AAT---GCTTTA---AGGCTTATTGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVAV-SV------------FWR-LLIASVVMLVGGYLGE---V------G--A-----------I----------------------GY------WLG-FAIGMVGWLYIIYEV-----F--A-GEASQISAS--K-GTAAS-K-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-ARCTIC32A02]_KJ928712 [unk-Proteo2-ARCTIC32A02] PRGD_OTU048_bfc357515cf89b3a98004f226491cf41 gb|KJ928712| PRGD_OTU048_bfc357515cf89b3a98004f226491cf41, putative proteorhodopsin gene, partial cds. PRGD_OTU048_bfc357515cf89b3a98004f226491cf41, putative proteorhodopsin gene, partial cds. KJ928712 [[proteorhodopsin/Proteobacterial-like cluster 2/EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), English Channel (48.7717, -3.9683) CTATTAACAGTACCACTTCAAATCGTGGAATTCTACTTGATACTTGCAGCTATTGCAGTTGTTGCTGTGTCAGTGTTTTGGCGATTATTAATTGCTTCGGTAGTCATGCTAGTAGGTGGATATCTGGGTGAAGTAGGGGCAATAGGATATTGGCTCGGTTTTGCTATAGGTATGGTAGGTTGGTTATATATTATCTACGAAGTATTTGCTGGTGAAGCTAGTCAAATTAGTGCAAGTAAAGGAACAGCGGCAAGTAAGACAGCATTCAATGCTTTAAGGCTTATTGTTACTGTT LLTVPLQIVEFYLILAAIAVVAVSVFWRLLIASVVMLVGGYLGEVGAIGYWLGFAIGMVGWLYIIYEVFAGEASQISASKGTAASKTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACAGTACCACTTCAAATCGTGGAATTCTACTTGATACTTGCAGCT---------ATT---GCAGTTGTTGCTGTG---TCAGTG------------------------------------TTTTGGCGA---TTATTAATTGCTTCGGTAGTCATGCTAGTAGGTGGATATCTGGGTGAA---------GTA------------------GGG------GCA---------------------------------ATA------------------------------------------------------------------GGATAT------------------TGGCTCGGT---TTTGCTATAGGTATGGTAGGTTGGTTATATATTATCTACGAAGTA---------------TTT------GCT---GGTGAAGCTAGTCAAATTAGTGCAAGT------AAA---GGAACAGCGGCAAGT---AAG---ACA---GCA---TTC---AAT---GCTTTA---AGGCTTATTGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVAV-SV------------FWR-LLIASVVMLVGGYLGE---V------G--A-----------I----------------------GY------WLG-FAIGMVGWLYIIYEV-----F--A-GEASQISAS--K-GTAAS-K-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-ARCTIC32A02]_KJ928707 [unk-Proteo2-ARCTIC32A02] PRGD_OTU048_3f25495ce60033a24ea948bc89138ca2 gb|KJ928707| PRGD_OTU048_3f25495ce60033a24ea948bc89138ca2, putative proteorhodopsin gene, partial cds. PRGD_OTU048_3f25495ce60033a24ea948bc89138ca2, putative proteorhodopsin gene, partial cds. KJ928707 [[proteorhodopsin/Proteobacterial-like cluster 2/EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) TTATTAACAGTTCCACTTCAAATCGTTGAGTTTTACTTGATTCTTGCAGCAATTGCTATTGTTGCAGTGTCAGTATTCTGGCGACTTCTTATTGCCTCATTAGTAATGCTAATAGGTGGATATCTAGGTGAAGTTGGACTTATGGATTACTGGCTTGGCTTTGCAATTGGAATGGTGGGTTGGTTATATATAATCTATGAGGTATTTGCTGGTGAAGCTAGTCAAATAAGTGCAAGTAAAGGTACAGCAGCGAGTAAAACAGCATTTAATGCTTTAAGACTCATTGTCACTGTT LLTVPLQIVEFYLILAAIAIVAVSVFWRLLIASLVMLIGGYLGEVGLMDYWLGFAIGMVGWLYIIYEVFAGEASQISASKGTAASKTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACAGTTCCACTTCAAATCGTTGAGTTTTACTTGATTCTTGCAGCA---------ATT---GCTATTGTTGCAGTG---TCAGTA------------------------------------TTCTGGCGA---CTTCTTATTGCCTCATTAGTAATGCTAATAGGTGGATATCTAGGTGAA---------GTT------------------GGA------CTT---------------------------------ATG------------------------------------------------------------------GATTAC------------------TGGCTTGGC---TTTGCAATTGGAATGGTGGGTTGGTTATATATAATCTATGAGGTA---------------TTT------GCT---GGTGAAGCTAGTCAAATAAGTGCAAGT------AAA---GGTACAGCAGCGAGT---AAA---ACA---GCA---TTT---AAT---GCTTTA---AGACTCATTGTCACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AIVAV-SV------------FWR-LLIASLVMLIGGYLGE---V------G--L-----------M----------------------DY------WLG-FAIGMVGWLYIIYEV-----F--A-GEASQISAS--K-GTAAS-K-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-ARCTIC32A02]_KJ928714 [unk-Proteo2-ARCTIC32A02] PRGD_OTU048_c973efe8a9508f2f6e21ab79a17b50e6 gb|KJ928714| PRGD_OTU048_c973efe8a9508f2f6e21ab79a17b50e6, putative proteorhodopsin gene, partial cds. PRGD_OTU048_c973efe8a9508f2f6e21ab79a17b50e6, putative proteorhodopsin gene, partial cds. KJ928714 [[proteorhodopsin/Proteobacterial-like cluster 2/EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683) TTGTTAACAGTTCCACTTCAGATTGTCGAATTCTACTTAATATTAGCAGCAATTGCGGTGGTTGCAGTGTCTGTATTTTGGCGGTTACTTATCGCTTCAGTAGTTATGTTAGTAGCTGGTTATCTTGGTGAAGTTGGCACAGTAGGTGTTTGGTCTGGTTTCACAGTAGGGATGATCGCTTGGTTATACATTATCTATGAAGTATTTGCAGGTGAAGCTAGCCAAATTAGTGAAAGCAAGGGAACAGTCGCAAGTAAAAAAGCATTTAATGCTTTAAGAATTATTGTTACTGTT LLTVPLQIVEFYLILAAIAVVAVSVFWRLLIASVVMLVAGYLGEVGTVGVWSGFTVGMIAWLYIIYEVFAGEASQISESKGTVASKKAFNALRIIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTAACAGTTCCACTTCAGATTGTCGAATTCTACTTAATATTAGCAGCA---------ATT---GCGGTGGTTGCAGTG---TCTGTA------------------------------------TTTTGGCGG---TTACTTATCGCTTCAGTAGTTATGTTAGTAGCTGGTTATCTTGGTGAA---------GTT------------------GGC------ACA---------------------------------GTA------------------------------------------------------------------GGTGTT------------------TGGTCTGGT---TTCACAGTAGGGATGATCGCTTGGTTATACATTATCTATGAAGTA---------------TTT------GCA---GGTGAAGCTAGCCAAATTAGTGAAAGC------AAG---GGAACAGTCGCAAGT---AAA---AAA---GCA---TTT---AAT---GCTTTA---AGAATTATTGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVAV-SV------------FWR-LLIASVVMLVAGYLGE---V------G--T-----------V----------------------GV------WSG-FTVGMIAWLYIIYEV-----F--A-GEASQISES--K-GTVAS-K-K-A-F-N-AL-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-ARCTIC32A02]_KJ928709 [unk-Proteo2-ARCTIC32A02] PRGD_OTU048_a741998525d30a6d31ca22fcca3755d0 gb|KJ928709| PRGD_OTU048_a741998525d30a6d31ca22fcca3755d0, putative proteorhodopsin gene, partial cds. PRGD_OTU048_a741998525d30a6d31ca22fcca3755d0, putative proteorhodopsin gene, partial cds. KJ928709 [[proteorhodopsin/Proteobacterial-like cluster 2/EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) CTGTTAACAGTCCCTCTACAGATTGTTGAATTTTATCTGATTCTTGCTGCAATTGCAGTAGTCGCAGTTTCAGTATTTTGGCGATTATTAGCAGCTTCAGTAATAATGTTAGTTGCTGGTTATCTTGGTGAAGTAGGATCCGTGGGCGTTTGGTCTGGGTTCACTGTAGGAATGATAGCTTGGTTATACATCATTTATGAAGTATTTGCAGGTGAAGCAAGTCAAATTAGTGCAAGCAAAGGTACAGCAGCAAGTAAAAAAGCATTCAATGCTTTAAGACTTATTGTTACAGTT LLTVPLQIVEFYLILAAIAVVAVSVFWRLLAASVIMLVAGYLGEVGSVGVWSGFTVGMIAWLYIIYEVFAGEASQISASKGTAASKKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACAGTCCCTCTACAGATTGTTGAATTTTATCTGATTCTTGCTGCA---------ATT---GCAGTAGTCGCAGTT---TCAGTA------------------------------------TTTTGGCGA---TTATTAGCAGCTTCAGTAATAATGTTAGTTGCTGGTTATCTTGGTGAA---------GTA------------------GGA------TCC---------------------------------GTG------------------------------------------------------------------GGCGTT------------------TGGTCTGGG---TTCACTGTAGGAATGATAGCTTGGTTATACATCATTTATGAAGTA---------------TTT------GCA---GGTGAAGCAAGTCAAATTAGTGCAAGC------AAA---GGTACAGCAGCAAGT---AAA---AAA---GCA---TTC---AAT---GCTTTA---AGACTTATTGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVAV-SV------------FWR-LLAASVIMLVAGYLGE---V------G--S-----------V----------------------GV------WSG-FTVGMIAWLYIIYEV-----F--A-GEASQISAS--K-GTAAS-K-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-ARCTIC32A02]_KJ928704 [unk-Proteo2-ARCTIC32A02] PRGD_OTU048_2f6de5fc0c699daf18dcc5f1818d76a0 gb|KJ928704| PRGD_OTU048_2f6de5fc0c699daf18dcc5f1818d76a0, putative proteorhodopsin gene, partial cds. PRGD_OTU048_2f6de5fc0c699daf18dcc5f1818d76a0, putative proteorhodopsin gene, partial cds. KJ928704 [[proteorhodopsin/Proteobacterial-like cluster 2/EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683) CTATTAACAGTTCCACTTCAGATTGTTGAGTTTTATCTAATCTTAGCTGCTATTGCAGTTGTAGCGATGTCAGTATTTTGGCGCTTACTTATTGCTTCAGTGGTTATGTTGGTTGCCGGTTATCTTGGCGAAGTTGGTACCGTAGGTTTATGGTCTGGCTTTACTGTGGGTATGATAGCTTGGTTATATATCATCTACGAAATATTCGCAGGCGAAGCTAGTAAAATTAGTGCGAGCAAGGGTACAGCAGCAAGTAAAAAAGCATTTAATGCTTTAAGACTTATTGTTACTGTT LLTVPLQIVEFYLILAAIAVVAMSVFWRLLIASVVMLVAGYLGEVGTVGLWSGFTVGMIAWLYIIYEIFAGEASKISASKGTAASKKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACAGTTCCACTTCAGATTGTTGAGTTTTATCTAATCTTAGCTGCT---------ATT---GCAGTTGTAGCGATG---TCAGTA------------------------------------TTTTGGCGC---TTACTTATTGCTTCAGTGGTTATGTTGGTTGCCGGTTATCTTGGCGAA---------GTT------------------GGT------ACC---------------------------------GTA------------------------------------------------------------------GGTTTA------------------TGGTCTGGC---TTTACTGTGGGTATGATAGCTTGGTTATATATCATCTACGAAATA---------------TTC------GCA---GGCGAAGCTAGTAAAATTAGTGCGAGC------AAG---GGTACAGCAGCAAGT---AAA---AAA---GCA---TTT---AAT---GCTTTA---AGACTTATTGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVAM-SV------------FWR-LLIASVVMLVAGYLGE---V------G--T-----------V----------------------GL------WSG-FTVGMIAWLYIIYEI-----F--A-GEASKISAS--K-GTAAS-K-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-ARCTIC32A02]_KJ928706 [unk-Proteo2-ARCTIC32A02] PRGD_OTU048_3e8970ce382c519e3cb727ca3b7ee257 gb|KJ928706| PRGD_OTU048_3e8970ce382c519e3cb727ca3b7ee257, putative proteorhodopsin gene, partial cds. PRGD_OTU048_3e8970ce382c519e3cb727ca3b7ee257, putative proteorhodopsin gene, partial cds. KJ928706 [[proteorhodopsin/Proteobacterial-like cluster 2/EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTACTTACAGTTCCACTACAAATTGTAGAGTTCTATTTGATTCTTGCTGCGATCGCAGTTGTTTCTATATCCGTTTTCTGGCGTTTACTTATCGCTTCTGTAGTTATGTTAGTTGCAGGCTACATTGGTGAAGTAAGTGCAATGGGAGACGGTGGTAGCTTATGGTCTGGTTTCTGGATCGGTATGGTTGCATGGTTATACATCATCTGGGAAGTATTTAAAGGTGAAGCTAGCCAAATTAGTGCAAGCAAAGGTACTGCGGCAAGTAAAAAAGCATTTAATGCGTTACGATTAATTGTAACTGTT LLTVPLQIVEFYLILAAIAVVSISVFWRLLIASVVMLVAGYIGEVSAMGDGGSLWSGFWIGMVAWLYIIWEVFKGEASQISASKGTAASKKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTTACAGTTCCACTACAAATTGTAGAGTTCTATTTGATTCTTGCTGCG---------ATC---GCAGTTGTTTCTATA---TCCGTT------------------------------------TTCTGGCGT---TTACTTATCGCTTCTGTAGTTATGTTAGTTGCAGGCTACATTGGTGAA---------GTA------------------AGT------GCA---------------------------------ATGGGA---GACGGT------GGT---------------------------------------------AGCTTA------------------TGGTCTGGT---TTCTGGATCGGTATGGTTGCATGGTTATACATCATCTGGGAAGTA---------------TTT------AAA---GGTGAAGCTAGCCAAATTAGTGCAAGC------AAA---GGTACTGCGGCAAGT---AAA---AAA---GCA---TTT---AAT---GCGTTA---CGATTAATTGTAACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVSI-SV------------FWR-LLIASVVMLVAGYIGE---V------S--A-----------MG-DG--G---------------SL------WSG-FWIGMVAWLYIIWEV-----F--K-GEASQISAS--K-GTAAS-K-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-ARCTIC32A02]_KJ928716 [unk-Proteo2-ARCTIC32A02] PRGD_OTU048_d9b4eae31cb167124c1cc3f4438700fa gb|KJ928716| PRGD_OTU048_d9b4eae31cb167124c1cc3f4438700fa, putative proteorhodopsin gene, partial cds. PRGD_OTU048_d9b4eae31cb167124c1cc3f4438700fa, putative proteorhodopsin gene, partial cds. KJ928716 [[proteorhodopsin/Proteobacterial-like cluster 2/EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) TTACTTACAGTTCCACTACAAATTGTAGAGTTCTATTTGATTCTTGCTGCGATCGCAGTTGTTTCTATATCCGTTTTCTGGCGTTTACTTATTGCCTCTGTGGTTATGTTAGTTGCAGGCTACATTGGTGAAGTAAGTGCAATGGGAGACGGTGGTAGCTTATGGTCTGGTTTCTGGATCGGTATGGTTGCATGGTTATACATCATCTGGGAAGTATTTAAAGGTGAAGCTAGCCAAATTAGTGCAAGCAAAGGTACTGCGGCAAGTAAAAAAGCATTTAATGCGTTACGATTGATTGTAACTGTT LLTVPLQIVEFYLILAAIAVVSISVFWRLLIASVVMLVAGYIGEVSAMGDGGSLWSGFWIGMVAWLYIIWEVFKGEASQISASKGTAASKKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTTACAGTTCCACTACAAATTGTAGAGTTCTATTTGATTCTTGCTGCG---------ATC---GCAGTTGTTTCTATA---TCCGTT------------------------------------TTCTGGCGT---TTACTTATTGCCTCTGTGGTTATGTTAGTTGCAGGCTACATTGGTGAA---------GTA------------------AGT------GCA---------------------------------ATGGGA---GACGGT------GGT---------------------------------------------AGCTTA------------------TGGTCTGGT---TTCTGGATCGGTATGGTTGCATGGTTATACATCATCTGGGAAGTA---------------TTT------AAA---GGTGAAGCTAGCCAAATTAGTGCAAGC------AAA---GGTACTGCGGCAAGT---AAA---AAA---GCA---TTT---AAT---GCGTTA---CGATTGATTGTAACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVSI-SV------------FWR-LLIASVVMLVAGYIGE---V------S--A-----------MG-DG--G---------------SL------WSG-FWIGMVAWLYIIWEV-----F--K-GEASQISAS--K-GTAAS-K-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-ARCTIC32A02]_KJ928717 [unk-Proteo2-ARCTIC32A02] PRGD_OTU048_df59ca7369b35475eb2dbfb34c1b8d89 gb|KJ928717| PRGD_OTU048_df59ca7369b35475eb2dbfb34c1b8d89, putative proteorhodopsin gene, partial cds. PRGD_OTU048_df59ca7369b35475eb2dbfb34c1b8d89, putative proteorhodopsin gene, partial cds. KJ928717 [[proteorhodopsin/Proteobacterial-like cluster 2/EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTACTTACAGTTCCACTTCAAATTGTAGAGTTCTATTTAATTCTTGCTGCGATAGCAGTTGTTTCTATATCCGTTTTCTGGCGTTTACTCATTGCTTCTGTAGTTATGTTAGTTGCAGGCTACATTGGTGAAGTAAGTGCAATGGGCGACGGTGGTAGCTTATGGTCTGGTTTCTGGATCGGTATGGTTGCATGGTTATACATCATCTGGGAAGTATTTAAAGGTGAAGCTAGCCAAATTAGTGCAAGCAAAGGTACTGCGGCAAGTAAAAAAGCATTTAATGCGCTACGATTAATTGTAACTGTT LLTVPLQIVEFYLILAAIAVVSISVFWRLLIASVVMLVAGYIGEVSAMGDGGSLWSGFWIGMVAWLYIIWEVFKGEASQISASKGTAASKKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTTACAGTTCCACTTCAAATTGTAGAGTTCTATTTAATTCTTGCTGCG---------ATA---GCAGTTGTTTCTATA---TCCGTT------------------------------------TTCTGGCGT---TTACTCATTGCTTCTGTAGTTATGTTAGTTGCAGGCTACATTGGTGAA---------GTA------------------AGT------GCA---------------------------------ATGGGC---GACGGT------GGT---------------------------------------------AGCTTA------------------TGGTCTGGT---TTCTGGATCGGTATGGTTGCATGGTTATACATCATCTGGGAAGTA---------------TTT------AAA---GGTGAAGCTAGCCAAATTAGTGCAAGC------AAA---GGTACTGCGGCAAGT---AAA---AAA---GCA---TTT---AAT---GCGCTA---CGATTAATTGTAACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVSI-SV------------FWR-LLIASVVMLVAGYIGE---V------S--A-----------MG-DG--G---------------SL------WSG-FWIGMVAWLYIIWEV-----F--K-GEASQISAS--K-GTAAS-K-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-ARCTIC32A02]_KJ928702 [unk-Proteo2-ARCTIC32A02] PRGD_OTU048_086d57550780da286382396976150bd7 gb|KJ928702| PRGD_OTU048_086d57550780da286382396976150bd7, putative proteorhodopsin gene, partial cds. PRGD_OTU048_086d57550780da286382396976150bd7, putative proteorhodopsin gene, partial cds. KJ928702 [[proteorhodopsin/Proteobacterial-like cluster 2/EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) TTACTTACAGTTCCACTTCAAATTGTAGAGTTCTATTTAATTCTTGCTGCGATAGCAGTTGTTTCTATATCCGTTTTCTGGCGGTTACTTATTGCTTCTGTAGTTATGTTAGTTGCAGGCTACATTGGTGAAGTAAGTGCAATGGGAGACGGTGGTAGCTTATGGTCTGGTTTCTGGATCGGTATGGTTGCATGGTTATACATCATCTGGGAAGTATTCAAGGGTGAAGCTAGCCAAATTAGTGCAAGCAAAGGTACTGCGGCAAGTAAGAAAGCATTCAATGCTTTACGATTAATTGTAACTGTT LLTVPLQIVEFYLILAAIAVVSISVFWRLLIASVVMLVAGYIGEVSAMGDGGSLWSGFWIGMVAWLYIIWEVFKGEASQISASKGTAASKKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTTACAGTTCCACTTCAAATTGTAGAGTTCTATTTAATTCTTGCTGCG---------ATA---GCAGTTGTTTCTATA---TCCGTT------------------------------------TTCTGGCGG---TTACTTATTGCTTCTGTAGTTATGTTAGTTGCAGGCTACATTGGTGAA---------GTA------------------AGT------GCA---------------------------------ATGGGA---GACGGT------GGT---------------------------------------------AGCTTA------------------TGGTCTGGT---TTCTGGATCGGTATGGTTGCATGGTTATACATCATCTGGGAAGTA---------------TTC------AAG---GGTGAAGCTAGCCAAATTAGTGCAAGC------AAA---GGTACTGCGGCAAGT---AAG---AAA---GCA---TTC---AAT---GCTTTA---CGATTAATTGTAACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVSI-SV------------FWR-LLIASVVMLVAGYIGE---V------S--A-----------MG-DG--G---------------SL------WSG-FWIGMVAWLYIIWEV-----F--K-GEASQISAS--K-GTAAS-K-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-ARCTIC32A02]_KJ928701 [unk-Proteo2-ARCTIC32A02] PRGD_OTU048_otuREP_578a5391f27a246717918c901fcd4fd5 gb|KJ928701| PRGD_OTU048_otuREP_578a5391f27a246717918c901fcd4fd5, putative proteorhodopsin gene, partial cds. PRGD_OTU048_otuREP_578a5391f27a246717918c901fcd4fd5, putative proteorhodopsin gene, partial cds. KJ928701 [[proteorhodopsin/Proteobacterial-like cluster 2/EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) TTACTTACAGTTCCACTTCAAATTGTAGAGTTCTATTTAATTCTTGCTGCGATAGCAGTTGTTTCTATATCTGTTTTCTGGCGTTTACTTATTGCTTCTGTAGTTATGTTAGTTGCAGGCTACATTGGTGAAGTAAGTGCAATGGGAGACGGTGGTAGCTTATGGTCTGGTTTCTGGATCGGTATGGTTGCATGGTTATACATCATCTGGGAAGTATTTAAAGGTGAAGCTAGCCAAATTAGTGCGAGCAAAGGTACTGCGGCAAGTAAGAAAGCATTTAATGCGTTACGATTAATTGTAACTGTT LLTVPLQIVEFYLILAAIAVVSISVFWRLLIASVVMLVAGYIGEVSAMGDGGSLWSGFWIGMVAWLYIIWEVFKGEASQISASKGTAASKKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTTACAGTTCCACTTCAAATTGTAGAGTTCTATTTAATTCTTGCTGCG---------ATA---GCAGTTGTTTCTATA---TCTGTT------------------------------------TTCTGGCGT---TTACTTATTGCTTCTGTAGTTATGTTAGTTGCAGGCTACATTGGTGAA---------GTA------------------AGT------GCA---------------------------------ATGGGA---GACGGT------GGT---------------------------------------------AGCTTA------------------TGGTCTGGT---TTCTGGATCGGTATGGTTGCATGGTTATACATCATCTGGGAAGTA---------------TTT------AAA---GGTGAAGCTAGCCAAATTAGTGCGAGC------AAA---GGTACTGCGGCAAGT---AAG---AAA---GCA---TTT---AAT---GCGTTA---CGATTAATTGTAACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVSI-SV------------FWR-LLIASVVMLVAGYIGE---V------S--A-----------MG-DG--G---------------SL------WSG-FWIGMVAWLYIIWEV-----F--K-GEASQISAS--K-GTAAS-K-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-ARCTIC32A02]_KJ928703 [unk-Proteo2-ARCTIC32A02] PRGD_OTU048_26347a3ef5943bb43d884ca4e9261b4b gb|KJ928703| PRGD_OTU048_26347a3ef5943bb43d884ca4e9261b4b, putative proteorhodopsin gene, partial cds. PRGD_OTU048_26347a3ef5943bb43d884ca4e9261b4b, putative proteorhodopsin gene, partial cds. KJ928703 [[proteorhodopsin/Proteobacterial-like cluster 2/EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683) CTACTCACAGTTCCACTTCAAATTGTAGAGTTTTATTTAATTCTTGCTGCGATTGCAGTTGTTTCTATTTCAGTTTTCTGGCGTTTACTTATTGCTTCTGTAGTTATGTTAGTTGCAGGCTATATAGGTGAAGTAAGTGCAATGGGAGACGGTGGTAGCTTATGGTCTGGTTTCTGGATCGGTATGGTTGCATGGTTATACATCATCTGGGAAGTATTTAAAGGTGAAGCTAGCCAAATTAGTGCAAGCAAAGGTACTGCGGCAAGTAAGAAAGCATTTAATGCATTACGATTGATTGTAACTGTT LLTVPLQIVEFYLILAAIAVVSISVFWRLLIASVVMLVAGYIGEVSAMGDGGSLWSGFWIGMVAWLYIIWEVFKGEASQISASKGTAASKKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTCACAGTTCCACTTCAAATTGTAGAGTTTTATTTAATTCTTGCTGCG---------ATT---GCAGTTGTTTCTATT---TCAGTT------------------------------------TTCTGGCGT---TTACTTATTGCTTCTGTAGTTATGTTAGTTGCAGGCTATATAGGTGAA---------GTA------------------AGT------GCA---------------------------------ATGGGA---GACGGT------GGT---------------------------------------------AGCTTA------------------TGGTCTGGT---TTCTGGATCGGTATGGTTGCATGGTTATACATCATCTGGGAAGTA---------------TTT------AAA---GGTGAAGCTAGCCAAATTAGTGCAAGC------AAA---GGTACTGCGGCAAGT---AAG---AAA---GCA---TTT---AAT---GCATTA---CGATTGATTGTAACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVSI-SV------------FWR-LLIASVVMLVAGYIGE---V------S--A-----------MG-DG--G---------------SL------WSG-FWIGMVAWLYIIWEV-----F--K-GEASQISAS--K-GTAAS-K-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-ARCTIC32A02]_KJ928711 [unk-Proteo2-ARCTIC32A02] PRGD_OTU048_b8fe24b6a009aaaaf0e5daf8b0b07c2d gb|KJ928711| PRGD_OTU048_b8fe24b6a009aaaaf0e5daf8b0b07c2d, putative proteorhodopsin gene, partial cds. PRGD_OTU048_b8fe24b6a009aaaaf0e5daf8b0b07c2d, putative proteorhodopsin gene, partial cds. KJ928711 [[proteorhodopsin/Proteobacterial-like cluster 2/EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683) TTACTTACAGTTCCACTGCAAATTGTAGAGTTTTATCTGATCCTTGCTGCTATTGCGGTTGTTTCTATTTCTGTTTTCTGGCGTTTACTTATCGCTTCTGTAGTTATGTTAGTTGCAGGCTACATTGGTGAGGTGAGTGCAATGGGAGACGGTGGTAGCTTATGGTCTGGTTTCTGGATCGGTATGGTTGCATGGTTATATATCATCTGGGAAGTATTTAAAGGTGAAGCTAGCCAGATTAGTGCAAGCAAAGGTACTGTAGCAAGTAAGAAAGCTTTTAATGCGTTAAGATTAATTGTGACTGTT LLTVPLQIVEFYLILAAIAVVSISVFWRLLIASVVMLVAGYIGEVSAMGDGGSLWSGFWIGMVAWLYIIWEVFKGEASQISASKGTVASKKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTTACAGTTCCACTGCAAATTGTAGAGTTTTATCTGATCCTTGCTGCT---------ATT---GCGGTTGTTTCTATT---TCTGTT------------------------------------TTCTGGCGT---TTACTTATCGCTTCTGTAGTTATGTTAGTTGCAGGCTACATTGGTGAG---------GTG------------------AGT------GCA---------------------------------ATGGGA---GACGGT------GGT---------------------------------------------AGCTTA------------------TGGTCTGGT---TTCTGGATCGGTATGGTTGCATGGTTATATATCATCTGGGAAGTA---------------TTT------AAA---GGTGAAGCTAGCCAGATTAGTGCAAGC------AAA---GGTACTGTAGCAAGT---AAG---AAA---GCT---TTT---AAT---GCGTTA---AGATTAATTGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVSI-SV------------FWR-LLIASVVMLVAGYIGE---V------S--A-----------MG-DG--G---------------SL------WSG-FWIGMVAWLYIIWEV-----F--K-GEASQISAS--K-GTVAS-K-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-ARCTIC32A02]_KJ928719 [unk-Proteo2-ARCTIC32A02] PRGD_OTU048_f92f69d338265a92d2394124be99384f gb|KJ928719| PRGD_OTU048_f92f69d338265a92d2394124be99384f, putative proteorhodopsin gene, partial cds. PRGD_OTU048_f92f69d338265a92d2394124be99384f, putative proteorhodopsin gene, partial cds. KJ928719 [[proteorhodopsin/Proteobacterial-like cluster 2/EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 EB0_41B09 ARCTIC32A02 Betaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTTCTTACAGTACCACTTCAAATTGTTGAGTTTTATTTAATTCTTGCTGCGATTGCAGTCGTTTCTATTTCAGTATTTTGGCGTTTATTAATTGCCTCAGTAGTTATGTTAGTAGCTGGCTACATTGGTGAAGTAAGTGCAATGGGAGACGGTGGTAGCCTATGGTCTGGTTTCTGGATTGGTATGGTTGCATGGTTATATATCATCTGGGAAGTATTTAAAGGTGAAGCTAGCCAGATTAGCGCAAGCAAAGGTACCGCTGCAAGTAAGAAAGCTTTTAATGCGTTAAGATTAATCGTTACTGTT LLTVPLQIVEFYLILAAIAVVSISVFWRLLIASVVMLVAGYIGEVSAMGDGGSLWSGFWIGMVAWLYIIWEVFKGEASQISASKGTAASKKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTTACAGTACCACTTCAAATTGTTGAGTTTTATTTAATTCTTGCTGCG---------ATT---GCAGTCGTTTCTATT---TCAGTA------------------------------------TTTTGGCGT---TTATTAATTGCCTCAGTAGTTATGTTAGTAGCTGGCTACATTGGTGAA---------GTA------------------AGT------GCA---------------------------------ATGGGA---GACGGT------GGT---------------------------------------------AGCCTA------------------TGGTCTGGT---TTCTGGATTGGTATGGTTGCATGGTTATATATCATCTGGGAAGTA---------------TTT------AAA---GGTGAAGCTAGCCAGATTAGCGCAAGC------AAA---GGTACCGCTGCAAGT---AAG---AAA---GCT---TTT---AAT---GCGTTA---AGATTAATCGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVSI-SV------------FWR-LLIASVVMLVAGYIGE---V------S--A-----------MG-DG--G---------------SL------WSG-FWIGMVAWLYIIWEV-----F--K-GEASQISAS--K-GTAAS-K-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ929435 [unk-Proteo2] PRGD_OTU124_740f57fd568037b5b0d9fa737fc729dc gb|KJ929435| PRGD_OTU124_740f57fd568037b5b0d9fa737fc729dc, putative proteorhodopsin gene, partial cds. PRGD_OTU124_740f57fd568037b5b0d9fa737fc729dc, putative proteorhodopsin gene, partial cds. KJ929435 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-33.28, 45.35) CTACTTACTGTTCCACTACAAATTACTGAATTCTTCTTAATCCTCTCAGCTATTGCTGTTGTAAGGGCTCAGCTTTTCTGGAAGTTACTCGTAGCTTCAGTTGTAATGCTTGTTACTGGCTATTTAGGTGAAGTAGGTCAAATGGAAGGCGGAAATGCTGGTCATCTGTGGCCAATGTTTATAGTTGGTACATTAGCATGGTTATACATCATCTATGAAATATTTGCTGGTGAAGCTTCTAAAATTAATGCTGCCTCAGGAACTGCTGCTTCGCAAAAAGCGTTTAGTGCTCTACGCCTAATCGTAACTGTG LLTVPLQITEFFLILSAIAVVRAQLFWKLLVASVVMLVTGYLGEVGQMEGGNAGHLWPMFIVGTLAWLYIIYEIFAGEASKINAASGTAASQKAFSALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTTACTGTTCCACTACAAATTACTGAATTCTTCTTAATCCTCTCAGCT---------ATT---GCTGTTGTAAGGGCT---CAGCTT------------------------------------TTCTGGAAG---TTACTCGTAGCTTCAGTTGTAATGCTTGTTACTGGCTATTTAGGTGAA---------GTA------------------GGT------CAA---------------------------------ATG------------------------------------------------------------------GAAGGCGGAAATGCTGGTCATCTGTGGCCAATG---TTTATAGTTGGTACATTAGCATGGTTATACATCATCTATGAAATA---------------TTT------GCT---GGTGAAGCTTCTAAAATTAATGCTGCC------TCA---GGAACTGCTGCTTCG---CAA---AAA---GCG---TTT---AGT---GCTCTA---CGCCTAATCGTAACTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQITEFFLILSA---I-AVVRA-QL------------FWK-LLVASVVMLVTGYLGE---V------G--Q-----------M----------------------EGGNAGHLWPM-FIVGTLAWLYIIYEI-----F--A-GEASKINAA--S-GTAAS-Q-K-A-F-S-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ929436 [unk-Proteo2] PRGD_OTU124_82e9e37cbc8ce1989b7a63bf0a3582a5 gb|KJ929436| PRGD_OTU124_82e9e37cbc8ce1989b7a63bf0a3582a5, putative proteorhodopsin gene, partial cds. PRGD_OTU124_82e9e37cbc8ce1989b7a63bf0a3582a5, putative proteorhodopsin gene, partial cds. KJ929436 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTACTTACTGTTCCACTACAAATTACTGAATTCTTCTTAATCCTCTCAGCTATTGCTGTTGTAAGGGCTCAACTTTTCTGGAAGTTACTCGTAGCTTCAGTTGTAATGCTTGTTACAGGCTATTTAGGTGAAGTAGGTCAAATGGAAGGCGGAAATGCTGGTCATCTATGGCCAATGTTTATAGTTGGTACATTAGCATGGTTATATATCATCTATGAAATATTTGCTGGTGAAGCCTCTAAAATTAATGCTGCCTCAGGAACTGCTGCTTCGCAAAAAGCGTTTAGTGCTCTACGCCTAATCGTAACTGTA LLTVPLQITEFFLILSAIAVVRAQLFWKLLVASVVMLVTGYLGEVGQMEGGNAGHLWPMFIVGTLAWLYIIYEIFAGEASKINAASGTAASQKAFSALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTTACTGTTCCACTACAAATTACTGAATTCTTCTTAATCCTCTCAGCT---------ATT---GCTGTTGTAAGGGCT---CAACTT------------------------------------TTCTGGAAG---TTACTCGTAGCTTCAGTTGTAATGCTTGTTACAGGCTATTTAGGTGAA---------GTA------------------GGT------CAA---------------------------------ATG------------------------------------------------------------------GAAGGCGGAAATGCTGGTCATCTATGGCCAATG---TTTATAGTTGGTACATTAGCATGGTTATATATCATCTATGAAATA---------------TTT------GCT---GGTGAAGCCTCTAAAATTAATGCTGCC------TCA---GGAACTGCTGCTTCG---CAA---AAA---GCG---TTT---AGT---GCTCTA---CGCCTAATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQITEFFLILSA---I-AVVRA-QL------------FWK-LLVASVVMLVTGYLGE---V------G--Q-----------M----------------------EGGNAGHLWPM-FIVGTLAWLYIIYEI-----F--A-GEASKINAA--S-GTAAS-Q-K-A-F-S-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ929432 [unk-Proteo2] PRGD_OTU124_otuREP_f879d7a3b5e819545de38e7cc10e40e1 gb|KJ929432| PRGD_OTU124_otuREP_f879d7a3b5e819545de38e7cc10e40e1, putative proteorhodopsin gene, partial cds. PRGD_OTU124_otuREP_f879d7a3b5e819545de38e7cc10e40e1, putative proteorhodopsin gene, partial cds. KJ929432 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) CTACTTACTGTTCCACTACAAATTACTGAATTCTTCTTAATCCTCTCAGCTATTGCTGTTGTAAGGGCTCAGCTTTTCTGGAAGTTACTCGTAGCTTCAGTTGTAATGCTTGTCACAGGCTATTTAGGTGAAGTAGGTCAAATGGAAGGCGGAAATGCTGGTCATCTATGGCCAATGTTTATAGTTGGTACATTAGCATGGTTATACATCATCTATGAAATATTTGCTGGTGAAGCCTCTAAAATTAATGCTGCTTCAGGAACTGCTGCTTCGCAAAAAGCGTTTAGTGCTTTACGCATAATCGTAACTGTA LLTVPLQITEFFLILSAIAVVRAQLFWKLLVASVVMLVTGYLGEVGQMEGGNAGHLWPMFIVGTLAWLYIIYEIFAGEASKINAASGTAASQKAFSALRIIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTTACTGTTCCACTACAAATTACTGAATTCTTCTTAATCCTCTCAGCT---------ATT---GCTGTTGTAAGGGCT---CAGCTT------------------------------------TTCTGGAAG---TTACTCGTAGCTTCAGTTGTAATGCTTGTCACAGGCTATTTAGGTGAA---------GTA------------------GGT------CAA---------------------------------ATG------------------------------------------------------------------GAAGGCGGAAATGCTGGTCATCTATGGCCAATG---TTTATAGTTGGTACATTAGCATGGTTATACATCATCTATGAAATA---------------TTT------GCT---GGTGAAGCCTCTAAAATTAATGCTGCT------TCA---GGAACTGCTGCTTCG---CAA---AAA---GCG---TTT---AGT---GCTTTA---CGCATAATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQITEFFLILSA---I-AVVRA-QL------------FWK-LLVASVVMLVTGYLGE---V------G--Q-----------M----------------------EGGNAGHLWPM-FIVGTLAWLYIIYEI-----F--A-GEASKINAA--S-GTAAS-Q-K-A-F-S-AL-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ929433 [unk-Proteo2] PRGD_OTU124_064dda80b2cae309ea60f9e7b2a625f4 gb|KJ929433| PRGD_OTU124_064dda80b2cae309ea60f9e7b2a625f4, putative proteorhodopsin gene, partial cds. PRGD_OTU124_064dda80b2cae309ea60f9e7b2a625f4, putative proteorhodopsin gene, partial cds. KJ929433 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) CTACTTACTGTTCCACTACAAATTACTGAATTCTTTTTAATCCTCTCAGCTATTGCTGTTGTAAGGGCTCAGCTTTTCTGGAAGTTACTCGTAGCTTCAGTTGTAATGCTGGTTACAGGTTATTTAGGTGAAGTAGGTCAAATGGAAGGCGGAAATGCCGGTCATCTATGGCCAATGTTTATAGTTGGTACATTAGCATGGTTATACATCATCTATGAAATATTTGCTGGTGAAGCTTCTAAAATTAATGCTGCTTCAGGAACTGCTGCTTCGCAAAAAGCGTTTAGTGCTTTACGCATAATCGTAACTGTA LLTVPLQITEFFLILSAIAVVRAQLFWKLLVASVVMLVTGYLGEVGQMEGGNAGHLWPMFIVGTLAWLYIIYEIFAGEASKINAASGTAASQKAFSALRIIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTTACTGTTCCACTACAAATTACTGAATTCTTTTTAATCCTCTCAGCT---------ATT---GCTGTTGTAAGGGCT---CAGCTT------------------------------------TTCTGGAAG---TTACTCGTAGCTTCAGTTGTAATGCTGGTTACAGGTTATTTAGGTGAA---------GTA------------------GGT------CAA---------------------------------ATG------------------------------------------------------------------GAAGGCGGAAATGCCGGTCATCTATGGCCAATG---TTTATAGTTGGTACATTAGCATGGTTATACATCATCTATGAAATA---------------TTT------GCT---GGTGAAGCTTCTAAAATTAATGCTGCT------TCA---GGAACTGCTGCTTCG---CAA---AAA---GCG---TTT---AGT---GCTTTA---CGCATAATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQITEFFLILSA---I-AVVRA-QL------------FWK-LLVASVVMLVTGYLGE---V------G--Q-----------M----------------------EGGNAGHLWPM-FIVGTLAWLYIIYEI-----F--A-GEASKINAA--S-GTAAS-Q-K-A-F-S-AL-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ929434 [unk-Proteo2] PRGD_OTU124_48adde941c77952bcbd270b3f6a2f339 gb|KJ929434| PRGD_OTU124_48adde941c77952bcbd270b3f6a2f339, putative proteorhodopsin gene, partial cds. PRGD_OTU124_48adde941c77952bcbd270b3f6a2f339, putative proteorhodopsin gene, partial cds. KJ929434 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683) CTACTTACTGTTCCACTACAAATCACTGAATTCTTTTTAATCCTCTCAGCTATTGCAGTTGTAAGAGCCCAGCTCTTCTGGAAGTTGCTCGTAGCTTCAGTTGTGATGCTGGTTACAGGTTATTTAGGTGAAGTAGGTCAAATGGAAGGCGGTAATGCAGGTCATTTATGGCCAATGTTTATAGTCGGTACATTAGCATGGTTGTACATCATCTATGAAATATTTGCTGGCGAAGCTTCTAAAATTAATGCTGCTTCAGGAACTCCTGCTTCTCAGAAAGCGTTTAATGCTTTACGCATAATCGTAACTTTT LLTVPLQITEFFLILSAIAVVRAQLFWKLLVASVVMLVTGYLGEVGQMEGGNAGHLWPMFIVGTLAWLYIIYEIFAGEASKINAASGTPASQKAFNALRIIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTTACTGTTCCACTACAAATCACTGAATTCTTTTTAATCCTCTCAGCT---------ATT---GCAGTTGTAAGAGCC---CAGCTC------------------------------------TTCTGGAAG---TTGCTCGTAGCTTCAGTTGTGATGCTGGTTACAGGTTATTTAGGTGAA---------GTA------------------GGT------CAA---------------------------------ATG------------------------------------------------------------------GAAGGCGGTAATGCAGGTCATTTATGGCCAATG---TTTATAGTCGGTACATTAGCATGGTTGTACATCATCTATGAAATA---------------TTT------GCT---GGCGAAGCTTCTAAAATTAATGCTGCT------TCA---GGAACTCCTGCTTCT---CAG---AAA---GCG---TTT---AAT---GCTTTA---CGCATAATCGTAACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQITEFFLILSA---I-AVVRA-QL------------FWK-LLVASVVMLVTGYLGE---V------G--Q-----------M----------------------EGGNAGHLWPM-FIVGTLAWLYIIYEI-----F--A-GEASKINAA--S-GTPAS-Q-K-A-F-N-AL-RIIVTF-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ928755 [unk-Proteo2] PRGD_OTU051a_otuREP_d96ae91a3a0aa3ba7d124e3d91821a08 gb|KJ928755| PRGD_OTU051a_otuREP_d96ae91a3a0aa3ba7d124e3d91821a08, putative proteorhodopsin gene, partial cds. PRGD_OTU051a_otuREP_d96ae91a3a0aa3ba7d124e3d91821a08, putative proteorhodopsin gene, partial cds. KJ928755 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTACTAACAGTACCTCTACAAATCGTTGAATTTTATTTAATCCTTGCTGCGATAGCTGTTGTTGCTGCATCACTTTTCTGGAGACTATTAATTGCTTCAGTGGTAATGCTAGTTGCTGGTTATCTCGGTGAAATAGGCGCAATGAATGTATGGCTTGGCTTCGTAATTGGTATGGCCGCATGGATATACATCATTTATGAAATCTTTGCTGGTGAAGCAAGTAAAATCAGTGCTGCTGAGGGTACTGCTGCATCTCAAAAAGCTTTCAATGCGTTGAGAATTATCGTAACTGTT LLTVPLQIVEFYLILAAIAVVAASLFWRLLIASVVMLVAGYLGEIGAMNVWLGFVIGMAAWIYIIYEIFAGEASKISAAEGTAASQKAFNALRIIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTAACAGTACCTCTACAAATCGTTGAATTTTATTTAATCCTTGCTGCG---------ATA---GCTGTTGTTGCTGCA---TCACTT------------------------------------TTCTGGAGA---CTATTAATTGCTTCAGTGGTAATGCTAGTTGCTGGTTATCTCGGTGAA---------ATA------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------AATGTA------------------TGGCTTGGC---TTCGTAATTGGTATGGCCGCATGGATATACATCATTTATGAAATC---------------TTT------GCT---GGTGAAGCAAGTAAAATCAGTGCTGCT------GAG---GGTACTGCTGCATCT---CAA---AAA---GCT---TTC---AAT---GCGTTG---AGAATTATCGTAACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVAA-SL------------FWR-LLIASVVMLVAGYLGE---I------G--A-----------M----------------------NV------WLG-FVIGMAAWIYIIYEI-----F--A-GEASKISAA--E-GTAAS-Q-K-A-F-N-AL-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ928760 [unk-Proteo2] PRGD_OTU051a_ce74e7bd7d76ddb0b1b48acc13ae61e3 gb|KJ928760| PRGD_OTU051a_ce74e7bd7d76ddb0b1b48acc13ae61e3, putative proteorhodopsin gene, partial cds. PRGD_OTU051a_ce74e7bd7d76ddb0b1b48acc13ae61e3, putative proteorhodopsin gene, partial cds. KJ928760 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Indian Ocean (-33.28, 45.35) CTACTAACAGTACCTCTACAAATTGTTGAATTTTACTTAATCCTTGCTGCGATAGCTGTTGTTGCTGCATCACTTTTCTGGAGACTATTAATTGCTTCAGTGGTAATGCTTGTTGCTGGTTATCTCGGTGAAATAGGCGCAATGAATGTATGGCTTGGCTTCGTAATTGGTATGGCCGCATGGATATACATCATTTATGAAATCTTTGCTGGTGAAGCAAGTAAAATCAGTGCTGCTGAGGGTACTGCTGCATCTCAAAAAGCTTTCAATGCGTTGAGAATTATCGTAACTGTT LLTVPLQIVEFYLILAAIAVVAASLFWRLLIASVVMLVAGYLGEIGAMNVWLGFVIGMAAWIYIIYEIFAGEASKISAAEGTAASQKAFNALRIIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTAACAGTACCTCTACAAATTGTTGAATTTTACTTAATCCTTGCTGCG---------ATA---GCTGTTGTTGCTGCA---TCACTT------------------------------------TTCTGGAGA---CTATTAATTGCTTCAGTGGTAATGCTTGTTGCTGGTTATCTCGGTGAA---------ATA------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------AATGTA------------------TGGCTTGGC---TTCGTAATTGGTATGGCCGCATGGATATACATCATTTATGAAATC---------------TTT------GCT---GGTGAAGCAAGTAAAATCAGTGCTGCT------GAG---GGTACTGCTGCATCT---CAA---AAA---GCT---TTC---AAT---GCGTTG---AGAATTATCGTAACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVAA-SL------------FWR-LLIASVVMLVAGYLGE---I------G--A-----------M----------------------NV------WLG-FVIGMAAWIYIIYEI-----F--A-GEASKISAA--E-GTAAS-Q-K-A-F-N-AL-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ928756 [unk-Proteo2] PRGD_OTU051a_2f2d3d926d0a20d71f43dfdc9c07e3e9 gb|KJ928756| PRGD_OTU051a_2f2d3d926d0a20d71f43dfdc9c07e3e9, putative proteorhodopsin gene, partial cds. PRGD_OTU051a_2f2d3d926d0a20d71f43dfdc9c07e3e9, putative proteorhodopsin gene, partial cds. KJ928756 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-23.5956, 69.0419) CTACTAACAGTACCTCTACAAATCGTTGAATTTTACTTAATCCTTGCTGCGATAGCTGTTGTTGCTGCATCACTTTTCTGGAGACTATTAATTGCTTCAGTGGTAATGTTAGTTGCTGGTTATCTCGGAGAAATAGGCGCAATGAATGAATGGCTTGGCTTCGTAATTGGTATGGCCGCATGGATATACATCATTTATGAAATCTTTGCTGGTGAAGCAAGTAAAATCAGTGCTGCTGAGGGTACTGCTGCATCTCAAAAAGCTTTCAATGCGTTGAGAATTATCGTAACTGTT LLTVPLQIVEFYLILAAIAVVAASLFWRLLIASVVMLVAGYLGEIGAMNEWLGFVIGMAAWIYIIYEIFAGEASKISAAEGTAASQKAFNALRIIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTAACAGTACCTCTACAAATCGTTGAATTTTACTTAATCCTTGCTGCG---------ATA---GCTGTTGTTGCTGCA---TCACTT------------------------------------TTCTGGAGA---CTATTAATTGCTTCAGTGGTAATGTTAGTTGCTGGTTATCTCGGAGAA---------ATA------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------AATGAA------------------TGGCTTGGC---TTCGTAATTGGTATGGCCGCATGGATATACATCATTTATGAAATC---------------TTT------GCT---GGTGAAGCAAGTAAAATCAGTGCTGCT------GAG---GGTACTGCTGCATCT---CAA---AAA---GCT---TTC---AAT---GCGTTG---AGAATTATCGTAACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVAA-SL------------FWR-LLIASVVMLVAGYLGE---I------G--A-----------M----------------------NE------WLG-FVIGMAAWIYIIYEI-----F--A-GEASKISAA--E-GTAAS-Q-K-A-F-N-AL-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ928758 [unk-Proteo2] PRGD_OTU051a_80e06be9ca0e165ae5c16069954d6af6 gb|KJ928758| PRGD_OTU051a_80e06be9ca0e165ae5c16069954d6af6, putative proteorhodopsin gene, partial cds. PRGD_OTU051a_80e06be9ca0e165ae5c16069954d6af6, putative proteorhodopsin gene, partial cds. KJ928758 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) CTACTAACTGTACCTCTACAAATCGTTGAATTTTACTTAATCCTTGCTGCGATAGCTGTTGTTGCTGCATCACTTTTCTGGAGACTATTAATTGCTTCAGTGGTAATGCTAGTTGCTGGTTATCTCGGTGAAATAGGCGCAATGAATGTATGGCTTGGCTTCGTAATTGGTATGGCCGCATGGATATACATCATTTATGAAATCTTTGCTGGTGAAGCAAGTAAAATCAGTGCTGCTGAGGGTACTGCTGCATCTCAAAAAGCTTTCAATGCATTGAGAATTATCGTAACAGTT LLTVPLQIVEFYLILAAIAVVAASLFWRLLIASVVMLVAGYLGEIGAMNVWLGFVIGMAAWIYIIYEIFAGEASKISAAEGTAASQKAFNALRIIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTAACTGTACCTCTACAAATCGTTGAATTTTACTTAATCCTTGCTGCG---------ATA---GCTGTTGTTGCTGCA---TCACTT------------------------------------TTCTGGAGA---CTATTAATTGCTTCAGTGGTAATGCTAGTTGCTGGTTATCTCGGTGAA---------ATA------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------AATGTA------------------TGGCTTGGC---TTCGTAATTGGTATGGCCGCATGGATATACATCATTTATGAAATC---------------TTT------GCT---GGTGAAGCAAGTAAAATCAGTGCTGCT------GAG---GGTACTGCTGCATCT---CAA---AAA---GCT---TTC---AAT---GCATTG---AGAATTATCGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVAA-SL------------FWR-LLIASVVMLVAGYLGE---I------G--A-----------M----------------------NV------WLG-FVIGMAAWIYIIYEI-----F--A-GEASKISAA--E-GTAAS-Q-K-A-F-N-AL-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ928757 [unk-Proteo2] PRGD_OTU051a_6881e4246ac8c8770772c1c893c5f0e3 gb|KJ928757| PRGD_OTU051a_6881e4246ac8c8770772c1c893c5f0e3, putative proteorhodopsin gene, partial cds. PRGD_OTU051a_6881e4246ac8c8770772c1c893c5f0e3, putative proteorhodopsin gene, partial cds. KJ928757 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) CTACTAACAGTGCCGCTGCAAATAGTTGAATTTTACTTAATCCTTGCTGCGATAGCTGTTGTTGCTGCATCGCTTTTCTGGAGACTATTAATTGCTTCAGTGGTTATGCTAGTTGCTGGTTATCTCGGTGAAATAAATGCAATGAATGTATGGCTTGGTTTCATGATAGGTATGGCCGCATGGTTATACATCATTTATGAAATCTTTGCTGGTGAAGCAAGTAAAATCAGTGCTGCTGAGGGTACTGCTGCATCTCAAAAAGCTTTCAATGCATTGAGAATTATCGTAACAGTT LLTVPLQIVEFYLILAAIAVVAASLFWRLLIASVVMLVAGYLGEINAMNVWLGFMIGMAAWLYIIYEIFAGEASKISAAEGTAASQKAFNALRIIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTAACAGTGCCGCTGCAAATAGTTGAATTTTACTTAATCCTTGCTGCG---------ATA---GCTGTTGTTGCTGCA---TCGCTT------------------------------------TTCTGGAGA---CTATTAATTGCTTCAGTGGTTATGCTAGTTGCTGGTTATCTCGGTGAA---------ATA------------------AAT------GCA---------------------------------ATG------------------------------------------------------------------AATGTA------------------TGGCTTGGT---TTCATGATAGGTATGGCCGCATGGTTATACATCATTTATGAAATC---------------TTT------GCT---GGTGAAGCAAGTAAAATCAGTGCTGCT------GAG---GGTACTGCTGCATCT---CAA---AAA---GCT---TTC---AAT---GCATTG---AGAATTATCGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVAA-SL------------FWR-LLIASVVMLVAGYLGE---I------N--A-----------M----------------------NV------WLG-FMIGMAAWLYIIYEI-----F--A-GEASKISAA--E-GTAAS-Q-K-A-F-N-AL-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ928759 [unk-Proteo2] PRGD_OTU051a_cd177ef3d5d607da8dbdb12006c82404 gb|KJ928759| PRGD_OTU051a_cd177ef3d5d607da8dbdb12006c82404, putative proteorhodopsin gene, partial cds. PRGD_OTU051a_cd177ef3d5d607da8dbdb12006c82404, putative proteorhodopsin gene, partial cds. KJ928759 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -33.28, 45.35) CTACTAACAGTGCCGCTGCAAATAGTTGAATTTTACTTAATCCTTGCTGCGATAGCTGTTGTTGCTGCATCGCTTTTCTGGAGACTATTAATTGCTTCAGTGGTTATGCTAGTTGCTGGTTATCTCGGTGAAATAGGTGCAATGAATGTATGGCTTGGTTTCATAATAGGTATGGCCGCATGGTTATACATCATTTATGAAATCTTTGCTGGTGAAGCAAGTAAAATCAGTGCTGCTGAGGGTACTGCTGCATCTCAAAAAGCTTTCAATGCATTGAGAATTATCGTAACAGTT LLTVPLQIVEFYLILAAIAVVAASLFWRLLIASVVMLVAGYLGEIGAMNVWLGFIIGMAAWLYIIYEIFAGEASKISAAEGTAASQKAFNALRIIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTAACAGTGCCGCTGCAAATAGTTGAATTTTACTTAATCCTTGCTGCG---------ATA---GCTGTTGTTGCTGCA---TCGCTT------------------------------------TTCTGGAGA---CTATTAATTGCTTCAGTGGTTATGCTAGTTGCTGGTTATCTCGGTGAA---------ATA------------------GGT------GCA---------------------------------ATG------------------------------------------------------------------AATGTA------------------TGGCTTGGT---TTCATAATAGGTATGGCCGCATGGTTATACATCATTTATGAAATC---------------TTT------GCT---GGTGAAGCAAGTAAAATCAGTGCTGCT------GAG---GGTACTGCTGCATCT---CAA---AAA---GCT---TTC---AAT---GCATTG---AGAATTATCGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVAA-SL------------FWR-LLIASVVMLVAGYLGE---I------G--A-----------M----------------------NV------WLG-FIIGMAAWLYIIYEI-----F--A-GEASKISAA--E-GTAAS-Q-K-A-F-N-AL-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2]_KJ928761 [unk-Proteo2] PRGD_OTU051a_e96619e4938bfeb7184713fb0411116d gb|KJ928761| PRGD_OTU051a_e96619e4938bfeb7184713fb0411116d, putative proteorhodopsin gene, partial cds. PRGD_OTU051a_e96619e4938bfeb7184713fb0411116d, putative proteorhodopsin gene, partial cds. KJ928761 [[proteorhodopsin/Proteobacterial-like cluster 2]] proteorhodopsin Proteobacterial-like cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTACTAACAGTGCCGCTACAAATCGTTGAATTTTACTTAATTCTTGCTGCGATAGCTGTTGTTGCTGCATCACTTTTCTGGAGACTACTAATCGCTTCAGTACTTATGTTAGTTGCTGGTTATCTCGGTGAAATAGATGCAATGAATGTATGGCTTGGCTTTGTAATTGGTATGGCCGCGTGGATATACATCATTTATGAAATCTTTGCTGGTGAAGCAAGTAAAATCAGTGCTGCTGAGGGTACTGCTGCATCTCAAAAAGCTTTCAATGCATTGAGAATTATCGTAACAGTT LLTVPLQIVEFYLILAAIAVVAASLFWRLLIASVLMLVAGYLGEIDAMNVWLGFVIGMAAWIYIIYEIFAGEASKISAAEGTAASQKAFNALRIIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTAACAGTGCCGCTACAAATCGTTGAATTTTACTTAATTCTTGCTGCG---------ATA---GCTGTTGTTGCTGCA---TCACTT------------------------------------TTCTGGAGA---CTACTAATCGCTTCAGTACTTATGTTAGTTGCTGGTTATCTCGGTGAA---------ATA------------------GAT------GCA---------------------------------ATG------------------------------------------------------------------AATGTA------------------TGGCTTGGC---TTTGTAATTGGTATGGCCGCGTGGATATACATCATTTATGAAATC---------------TTT------GCT---GGTGAAGCAAGTAAAATCAGTGCTGCT------GAG---GGTACTGCTGCATCT---CAA---AAA---GCT---TTC---AAT---GCATTG---AGAATTATCGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVAA-SL------------FWR-LLIASVLMLVAGYLGE---I------D--A-----------M----------------------NV------WLG-FVIGMAAWIYIIYEI-----F--A-GEASKISAA--E-GTAAS-Q-K-A-F-N-AL-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928144 [unk-Proteo2-b] PRGD_OTU026_484ae1985a0d5bf404c501dbc4eef9b9 gb|KJ928144| PRGD_OTU026_484ae1985a0d5bf404c501dbc4eef9b9, putative proteorhodopsin gene, partial cds. PRGD_OTU026_484ae1985a0d5bf404c501dbc4eef9b9, putative proteorhodopsin gene, partial cds. KJ928144 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTGTTAACCGTTCCTCTCCAAATAGTTGAATTTTATCTCATTTTAGCTGCCGTAGCAGTAGTCGCCGCCGGATTATTCTGGAGGCTCATGATCGCATCACTTGTTATGCTGGTAGCCGGTTATTTAGGCGAAGTCGGTGGCGCTGATGGAGGGTCCTTATGGATCTGCTTCATTATTGGAATGGCCGGATGGATCTACATTCTATATGAAATTTTTGCTGGAGAGGCCAGTAAGATCAATGCAAGTGAGGGAACAAATGCTTCAAAGACAGCATTTAACGCGCTTAAATGGATTGTTACTATA LLTVPLQIVEFYLILAAVAVVAAGLFWRLMIASLVMLVAGYLGEVGGADGGSLWICFIIGMAGWIYILYEIFAGEASKINASEGTNASKTAFNALKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACCGTTCCTCTCCAAATAGTTGAATTTTATCTCATTTTAGCTGCC---------GTA---GCAGTAGTCGCCGCC---GGATTA------------------------------------TTCTGGAGG---CTCATGATCGCATCACTTGTTATGCTGGTAGCCGGTTATTTAGGCGAA---------GTC------------------GGT------GGC---------------------------------GCT------------------------------------------------------------------GATGGA---------GGGTCCTTATGGATCTGC---TTCATTATTGGAATGGCCGGATGGATCTACATTCTATATGAAATT---------------TTT------GCT---GGAGAGGCCAGTAAGATCAATGCAAGT------GAG---GGAACAAATGCTTCA---AAG---ACA---GCA---TTT---AAC---GCGCTT---AAATGGATTGTTACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---V-AVVAA-GL------------FWR-LMIASLVMLVAGYLGE---V------G--G-----------A----------------------DG---GSLWIC-FIIGMAGWIYILYEI-----F--A-GEASKINAS--E-GTNAS-K-T-A-F-N-AL-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928159 [unk-Proteo2-b] PRGD_OTU026_a214250021f3b8d8f80af00273bdec83 gb|KJ928159| PRGD_OTU026_a214250021f3b8d8f80af00273bdec83, putative proteorhodopsin gene, partial cds. PRGD_OTU026_a214250021f3b8d8f80af00273bdec83, putative proteorhodopsin gene, partial cds. KJ928159 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTGTTAACCGTTCCTCTCCAAATAGTTGAATTTTATCTCATTTTAGCTGCGGTAGCAGTAGTCGCCGCCGGATTATTCTGGAGGCTCATGATCGCATCACTTGTTATGCTGGTAGCCGGTTATTTAGGCGAAGTCGGTGGCGCTGATGGAGGGTCCTTATGGATCTGCTTCATTATTGGAATGGCCGGATGGATTTACATTCTATATGAAATTTTTGCTGGAGAGGCCAGTAAGATCAATGCAAGTGAGGGAACAAATGCTTCAAAGACAGCATTTAACGCACTTAAATGGATTGTCACTATA LLTVPLQIVEFYLILAAVAVVAAGLFWRLMIASLVMLVAGYLGEVGGADGGSLWICFIIGMAGWIYILYEIFAGEASKINASEGTNASKTAFNALKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACCGTTCCTCTCCAAATAGTTGAATTTTATCTCATTTTAGCTGCG---------GTA---GCAGTAGTCGCCGCC---GGATTA------------------------------------TTCTGGAGG---CTCATGATCGCATCACTTGTTATGCTGGTAGCCGGTTATTTAGGCGAA---------GTC------------------GGT------GGC---------------------------------GCT------------------------------------------------------------------GATGGA---------GGGTCCTTATGGATCTGC---TTCATTATTGGAATGGCCGGATGGATTTACATTCTATATGAAATT---------------TTT------GCT---GGAGAGGCCAGTAAGATCAATGCAAGT------GAG---GGAACAAATGCTTCA---AAG---ACA---GCA---TTT---AAC---GCACTT---AAATGGATTGTCACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---V-AVVAA-GL------------FWR-LMIASLVMLVAGYLGE---V------G--G-----------A----------------------DG---GSLWIC-FIIGMAGWIYILYEI-----F--A-GEASKINAS--E-GTNAS-K-T-A-F-N-AL-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928149 [unk-Proteo2-b] PRGD_OTU026_669b9196ed2b2ecfb06545642fdfb820 gb|KJ928149| PRGD_OTU026_669b9196ed2b2ecfb06545642fdfb820, putative proteorhodopsin gene, partial cds. PRGD_OTU026_669b9196ed2b2ecfb06545642fdfb820, putative proteorhodopsin gene, partial cds. KJ928149 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTGTTAACCGTTCCTCTCCAAATAGTTGAATTTTATCTCATTTTAGCTGCCGTAGCAGTAGTCGCCGCCGCATTATTCTGGAGGCTCATGATCGCATCAATTATTATGCTTGTAGCCGGTTATTTAGGTGAAGTCGGTGGCGCTGATGGTGGGTCCTTATGGATCTGCTTCATTATTGGAATGGCCGGATGGATCTACATTCTATATGAAATTTTTGCTGGAGAGGCCAGTAAGATCAATGCAAGTGAGGGAACAAATGCTTCAAAGACAGCATTTAACGCACTTAAATGGATTGTCACTATA LLTVPLQIVEFYLILAAVAVVAAALFWRLMIASIIMLVAGYLGEVGGADGGSLWICFIIGMAGWIYILYEIFAGEASKINASEGTNASKTAFNALKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACCGTTCCTCTCCAAATAGTTGAATTTTATCTCATTTTAGCTGCC---------GTA---GCAGTAGTCGCCGCC---GCATTA------------------------------------TTCTGGAGG---CTCATGATCGCATCAATTATTATGCTTGTAGCCGGTTATTTAGGTGAA---------GTC------------------GGT------GGC---------------------------------GCT------------------------------------------------------------------GATGGT---------GGGTCCTTATGGATCTGC---TTCATTATTGGAATGGCCGGATGGATCTACATTCTATATGAAATT---------------TTT------GCT---GGAGAGGCCAGTAAGATCAATGCAAGT------GAG---GGAACAAATGCTTCA---AAG---ACA---GCA---TTT---AAC---GCACTT---AAATGGATTGTCACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---V-AVVAA-AL------------FWR-LMIASIIMLVAGYLGE---V------G--G-----------A----------------------DG---GSLWIC-FIIGMAGWIYILYEI-----F--A-GEASKINAS--E-GTNAS-K-T-A-F-N-AL-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928170 [unk-Proteo2-b] PRGD_OTU026_eebadc2510461ff54cc6373b7eb99bea gb|KJ928170| PRGD_OTU026_eebadc2510461ff54cc6373b7eb99bea, putative proteorhodopsin gene, partial cds. PRGD_OTU026_eebadc2510461ff54cc6373b7eb99bea, putative proteorhodopsin gene, partial cds. KJ928170 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Arctic Ocean-Atlantic side (73.9992, 19.2097) CTGTTAACCGTTCCTCTCCAAATAGTTGAATTTTATCTCATTTTAGCTGCCGTAGCAGTAGTCGCCGCCGCATTATTCTGGAGGCTCATGATCGCATCACTTGTTATGCTGATAGCCGGTTATTTAGGTGAAGTCGGTGGCGCTGATGGAGGGTCCTTATGGATCTGCTTCATTATTGGACTGGCCGGATGGATCTACATTCTATATGAAATTTTTGCTGGAGAGGCCAGTAAGATCAATGCAAGTGAGGGAACAAATGCTTCAAAGACAGCATTTAACGGACTTAAATGGATTGTCACTATA LLTVPLQIVEFYLILAAVAVVAAALFWRLMIASLVMLIAGYLGEVGGADGGSLWICFIIGLAGWIYILYEIFAGEASKINASEGTNASKTAFNGLKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACCGTTCCTCTCCAAATAGTTGAATTTTATCTCATTTTAGCTGCC---------GTA---GCAGTAGTCGCCGCC---GCATTA------------------------------------TTCTGGAGG---CTCATGATCGCATCACTTGTTATGCTGATAGCCGGTTATTTAGGTGAA---------GTC------------------GGT------GGC---------------------------------GCT------------------------------------------------------------------GATGGA---------GGGTCCTTATGGATCTGC---TTCATTATTGGACTGGCCGGATGGATCTACATTCTATATGAAATT---------------TTT------GCT---GGAGAGGCCAGTAAGATCAATGCAAGT------GAG---GGAACAAATGCTTCA---AAG---ACA---GCA---TTT---AAC---GGACTT---AAATGGATTGTCACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---V-AVVAA-AL------------FWR-LMIASLVMLIAGYLGE---V------G--G-----------A----------------------DG---GSLWIC-FIIGLAGWIYILYEI-----F--A-GEASKINAS--E-GTNAS-K-T-A-F-N-GL-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928137 [unk-Proteo2-b] PRGD_OTU026_otuREP_963890423bf211ebfa90a2475d1cf9c3 gb|KJ928137| PRGD_OTU026_otuREP_963890423bf211ebfa90a2475d1cf9c3, putative proteorhodopsin gene, partial cds. PRGD_OTU026_otuREP_963890423bf211ebfa90a2475d1cf9c3, putative proteorhodopsin gene, partial cds. KJ928137 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTGTTAACCGTTCCTCTCCAAATAGTTGAATTTTATCTCATTTTAGCTGCCGTAGCAGTAGTCGCCGCCGGATTATTCTGGAGGCTCATGATAGCATCACTTGTTATGCTGATAGCCGGTTATTTAGGTGAAGTCGGTGGCGCTGATGGAGGGTCCTTATGGATCTGCTTCATTATTGGAATGGCCGGATGGATCTACATTCTATATGAAATTTTTGCTGGAGAGGCCAGTAAGATCAATGCAAGTGAGGGAACAAATGCTTCAAAGACAGCATTTAGCGGACTTAAATGGATTGTCACCATA LLTVPLQIVEFYLILAAVAVVAAGLFWRLMIASLVMLIAGYLGEVGGADGGSLWICFIIGMAGWIYILYEIFAGEASKINASEGTNASKTAFSGLKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACCGTTCCTCTCCAAATAGTTGAATTTTATCTCATTTTAGCTGCC---------GTA---GCAGTAGTCGCCGCC---GGATTA------------------------------------TTCTGGAGG---CTCATGATAGCATCACTTGTTATGCTGATAGCCGGTTATTTAGGTGAA---------GTC------------------GGT------GGC---------------------------------GCT------------------------------------------------------------------GATGGA---------GGGTCCTTATGGATCTGC---TTCATTATTGGAATGGCCGGATGGATCTACATTCTATATGAAATT---------------TTT------GCT---GGAGAGGCCAGTAAGATCAATGCAAGT------GAG---GGAACAAATGCTTCA---AAG---ACA---GCA---TTT---AGC---GGACTT---AAATGGATTGTCACCATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---V-AVVAA-GL------------FWR-LMIASLVMLIAGYLGE---V------G--G-----------A----------------------DG---GSLWIC-FIIGMAGWIYILYEI-----F--A-GEASKINAS--E-GTNAS-K-T-A-F-S-GL-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928166 [unk-Proteo2-b] PRGD_OTU026_dbfed91bfce64ed732867fd9247b75e7 gb|KJ928166| PRGD_OTU026_dbfed91bfce64ed732867fd9247b75e7, putative proteorhodopsin gene, partial cds. PRGD_OTU026_dbfed91bfce64ed732867fd9247b75e7, putative proteorhodopsin gene, partial cds. KJ928166 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTGTTGACGGTTCCCCTTCAAATAGTTGAATTTTATCTCATTTTAGCTGCCGTAGCAGTCGTCGCCGCCGGATTATTCTGGAGGCTCATGATCGCATCACTTGTTATGCTGATAGCCGGTTATTTAGGTGAAGTCGGTGGCGCTGATGGAGGGTCCTTATGGATCTGCTTCATTATTGGAATGGCCGGATGGATCTACATTCTATATGAAATTTTTGCTGGTGAGGCCAGTAAGATCAATGCAAGTGAGGGAACAAATGCTTCAAAGACAGCATTTAATGCACTTAAATGGATTGTCACTATA LLTVPLQIVEFYLILAAVAVVAAGLFWRLMIASLVMLIAGYLGEVGGADGGSLWICFIIGMAGWIYILYEIFAGEASKINASEGTNASKTAFNALKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTGACGGTTCCCCTTCAAATAGTTGAATTTTATCTCATTTTAGCTGCC---------GTA---GCAGTCGTCGCCGCC---GGATTA------------------------------------TTCTGGAGG---CTCATGATCGCATCACTTGTTATGCTGATAGCCGGTTATTTAGGTGAA---------GTC------------------GGT------GGC---------------------------------GCT------------------------------------------------------------------GATGGA---------GGGTCCTTATGGATCTGC---TTCATTATTGGAATGGCCGGATGGATCTACATTCTATATGAAATT---------------TTT------GCT---GGTGAGGCCAGTAAGATCAATGCAAGT------GAG---GGAACAAATGCTTCA---AAG---ACA---GCA---TTT---AAT---GCACTT---AAATGGATTGTCACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---V-AVVAA-GL------------FWR-LMIASLVMLIAGYLGE---V------G--G-----------A----------------------DG---GSLWIC-FIIGMAGWIYILYEI-----F--A-GEASKINAS--E-GTNAS-K-T-A-F-N-AL-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928171 [unk-Proteo2-b] PRGD_OTU026_f9c545c7e1987b9ec22e6dbee08a57f4 gb|KJ928171| PRGD_OTU026_f9c545c7e1987b9ec22e6dbee08a57f4, putative proteorhodopsin gene, partial cds. PRGD_OTU026_f9c545c7e1987b9ec22e6dbee08a57f4, putative proteorhodopsin gene, partial cds. KJ928171 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGTTAACGGTTCCACTTCAAATAGTTGAATTTTATCTCATTTTAGCTGCCGTAGCAGTAGTCGCCGCCGGATTATTCTGGAGGCTCATGATCGCATCACTTGTTATGCTGGTAGCCGGTTATTTAGGTGAAGTCGGTGGCGCTGATGGAGGGTCCTTATGGATCTGCTTCATTATTGGAATGGCCGGATGGATCTACATTCTATATGAAATTTTTGCTGGAGAGGCCAGTAAAATCAATGCAAGTGAGGGAACAAATGCTTCAAAGACAGCATTTAACGCACTTAAATGGATTGTCACTATA LLTVPLQIVEFYLILAAVAVVAAGLFWRLMIASLVMLVAGYLGEVGGADGGSLWICFIIGMAGWIYILYEIFAGEASKINASEGTNASKTAFNALKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACGGTTCCACTTCAAATAGTTGAATTTTATCTCATTTTAGCTGCC---------GTA---GCAGTAGTCGCCGCC---GGATTA------------------------------------TTCTGGAGG---CTCATGATCGCATCACTTGTTATGCTGGTAGCCGGTTATTTAGGTGAA---------GTC------------------GGT------GGC---------------------------------GCT------------------------------------------------------------------GATGGA---------GGGTCCTTATGGATCTGC---TTCATTATTGGAATGGCCGGATGGATCTACATTCTATATGAAATT---------------TTT------GCT---GGAGAGGCCAGTAAAATCAATGCAAGT------GAG---GGAACAAATGCTTCA---AAG---ACA---GCA---TTT---AAC---GCACTT---AAATGGATTGTCACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---V-AVVAA-GL------------FWR-LMIASLVMLVAGYLGE---V------G--G-----------A----------------------DG---GSLWIC-FIIGMAGWIYILYEI-----F--A-GEASKINAS--E-GTNAS-K-T-A-F-N-AL-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928152 [unk-Proteo2-b] PRGD_OTU026_6ef41ff1c4f892ee0dcaea853e5fda51 gb|KJ928152| PRGD_OTU026_6ef41ff1c4f892ee0dcaea853e5fda51, putative proteorhodopsin gene, partial cds. PRGD_OTU026_6ef41ff1c4f892ee0dcaea853e5fda51, putative proteorhodopsin gene, partial cds. KJ928152 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) CTGTTAACCGTTCCTCTTCAAATAGTTGAATTTTATCTCATTTTAGCTGCCGTAGCAGTAGTCGCCGCCGGATTATTCTGGAGGCTCATGATCGCATCACTTGTTATGCTGATAGCCGGTTATTTAGGTGAAGTCGGTGGCGCTGATGGAGGGTCCTTATGGATCTGCTTCATTATTGGAATGGCCGGATGGATCTACATTCTATATGAAATTTTTGCTGGAGAGGCCAGTAAGATCAATGCAAGTGAGGGAACAAATGCTTCAAAGACAGCATTTAACGCACTTAAATGGATTGTCACTATA LLTVPLQIVEFYLILAAVAVVAAGLFWRLMIASLVMLIAGYLGEVGGADGGSLWICFIIGMAGWIYILYEIFAGEASKINASEGTNASKTAFNALKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACCGTTCCTCTTCAAATAGTTGAATTTTATCTCATTTTAGCTGCC---------GTA---GCAGTAGTCGCCGCC---GGATTA------------------------------------TTCTGGAGG---CTCATGATCGCATCACTTGTTATGCTGATAGCCGGTTATTTAGGTGAA---------GTC------------------GGT------GGC---------------------------------GCT------------------------------------------------------------------GATGGA---------GGGTCCTTATGGATCTGC---TTCATTATTGGAATGGCCGGATGGATCTACATTCTATATGAAATT---------------TTT------GCT---GGAGAGGCCAGTAAGATCAATGCAAGT------GAG---GGAACAAATGCTTCA---AAG---ACA---GCA---TTT---AAC---GCACTT---AAATGGATTGTCACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---V-AVVAA-GL------------FWR-LMIASLVMLIAGYLGE---V------G--G-----------A----------------------DG---GSLWIC-FIIGMAGWIYILYEI-----F--A-GEASKINAS--E-GTNAS-K-T-A-F-N-AL-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928141 [unk-Proteo2-b] PRGD_OTU026_18a219981c7e10379b900bb06cfdfbac gb|KJ928141| PRGD_OTU026_18a219981c7e10379b900bb06cfdfbac, putative proteorhodopsin gene, partial cds. PRGD_OTU026_18a219981c7e10379b900bb06cfdfbac, putative proteorhodopsin gene, partial cds. KJ928141 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTGTTAACCGTTCCTCTCCAAATAGTTGAATTTTATCTCATTTTAGCTGCCGTAGCAGTAGTCGCCGCCGCATTATTCTGGAGGCTCATGATCGCATCACTTGTTATGCTGATAGCGGGTTATTTAGGTGAAGTTGGTGGTGCCGATGGAGGGTCCTTATGGATCTGCTTCATAATTGGGATGGCCGGATGGATCTACATTCTATATGAGATTTTTGCTGGAGAGGCCAGTAAGATCAATGCAAGTGAGGGAACAAATGCTTCAAAGACGGCATTTAGTGGACTCAAATGGATTGTCACTATA LLTVPLQIVEFYLILAAVAVVAAALFWRLMIASLVMLIAGYLGEVGGADGGSLWICFIIGMAGWIYILYEIFAGEASKINASEGTNASKTAFSGLKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACCGTTCCTCTCCAAATAGTTGAATTTTATCTCATTTTAGCTGCC---------GTA---GCAGTAGTCGCCGCC---GCATTA------------------------------------TTCTGGAGG---CTCATGATCGCATCACTTGTTATGCTGATAGCGGGTTATTTAGGTGAA---------GTT------------------GGT------GGT---------------------------------GCC------------------------------------------------------------------GATGGA---------GGGTCCTTATGGATCTGC---TTCATAATTGGGATGGCCGGATGGATCTACATTCTATATGAGATT---------------TTT------GCT---GGAGAGGCCAGTAAGATCAATGCAAGT------GAG---GGAACAAATGCTTCA---AAG---ACG---GCA---TTT---AGT---GGACTC---AAATGGATTGTCACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---V-AVVAA-AL------------FWR-LMIASLVMLIAGYLGE---V------G--G-----------A----------------------DG---GSLWIC-FIIGMAGWIYILYEI-----F--A-GEASKINAS--E-GTNAS-K-T-A-F-S-GL-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928154 [unk-Proteo2-b] PRGD_OTU026_737fa14923ae57b4053ca37612535d10 gb|KJ928154| PRGD_OTU026_737fa14923ae57b4053ca37612535d10, putative proteorhodopsin gene, partial cds. PRGD_OTU026_737fa14923ae57b4053ca37612535d10, putative proteorhodopsin gene, partial cds. KJ928154 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) CTATTAACCGTTCCTCTCCAAATAGTTGAATTTTATCTCATTTTAGCTGCCGTAGCAGTAGTCGCCGCCGGATTATTCTGGAGGCTCTTGATCGCATCACTTGTTATGCTGATAGCGGGTTATTTAGGTGAGGTTGGTGGCGCCGGTGGAGGGTCCTTATGGATCTGCTTCATTATTGGGATGGCCGGATGGATCTACATTCTATATGAGATTTTTGCTGGAGAGGCCAGTAAGATCAATGCAAGTGAGGGAACAAATGCTTCAAAGACGGCATTTAACGGACTCAAATGGATTGTTACTATA LLTVPLQIVEFYLILAAVAVVAAGLFWRLLIASLVMLIAGYLGEVGGAGGGSLWICFIIGMAGWIYILYEIFAGEASKINASEGTNASKTAFNGLKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACCGTTCCTCTCCAAATAGTTGAATTTTATCTCATTTTAGCTGCC---------GTA---GCAGTAGTCGCCGCC---GGATTA------------------------------------TTCTGGAGG---CTCTTGATCGCATCACTTGTTATGCTGATAGCGGGTTATTTAGGTGAG---------GTT------------------GGT------GGC---------------------------------GCC------------------------------------------------------------------GGTGGA---------GGGTCCTTATGGATCTGC---TTCATTATTGGGATGGCCGGATGGATCTACATTCTATATGAGATT---------------TTT------GCT---GGAGAGGCCAGTAAGATCAATGCAAGT------GAG---GGAACAAATGCTTCA---AAG---ACG---GCA---TTT---AAC---GGACTC---AAATGGATTGTTACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---V-AVVAA-GL------------FWR-LLIASLVMLIAGYLGE---V------G--G-----------A----------------------GG---GSLWIC-FIIGMAGWIYILYEI-----F--A-GEASKINAS--E-GTNAS-K-T-A-F-N-GL-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928148 [unk-Proteo2-b] PRGD_OTU026_646606064abb01bb3be1936360322071 gb|KJ928148| PRGD_OTU026_646606064abb01bb3be1936360322071, putative proteorhodopsin gene, partial cds. PRGD_OTU026_646606064abb01bb3be1936360322071, putative proteorhodopsin gene, partial cds. KJ928148 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025), Indian Ocean (-23.5956, 69.0419) CTGTTAACCGTTCCTCTTCAAATAGTTGAATTTTATCTCATTTTAGCTGCCGTGGCAGTAGTGGCCGCCGGATTATTCTGGAGGCTCATGATCGCATCACTTGTTATGCTGATAGCGGGTTATTTAGGTGAAGTTGGTGGCGCCGATGGAGGGTCCTTATGGATCTGCTTCATTATTGGGATGGCCGGATGGATCTACATTCTATATGAGATTTTTGCTGGAGAGGCCAGTAAGATCAATGCAAGTGAGGGAACAGCTGCTTCAAAGACGGCATTTAACGGACTCAAATGGATTGTCACTATA LLTVPLQIVEFYLILAAVAVVAAGLFWRLMIASLVMLIAGYLGEVGGADGGSLWICFIIGMAGWIYILYEIFAGEASKINASEGTAASKTAFNGLKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACCGTTCCTCTTCAAATAGTTGAATTTTATCTCATTTTAGCTGCC---------GTG---GCAGTAGTGGCCGCC---GGATTA------------------------------------TTCTGGAGG---CTCATGATCGCATCACTTGTTATGCTGATAGCGGGTTATTTAGGTGAA---------GTT------------------GGT------GGC---------------------------------GCC------------------------------------------------------------------GATGGA---------GGGTCCTTATGGATCTGC---TTCATTATTGGGATGGCCGGATGGATCTACATTCTATATGAGATT---------------TTT------GCT---GGAGAGGCCAGTAAGATCAATGCAAGT------GAG---GGAACAGCTGCTTCA---AAG---ACG---GCA---TTT---AAC---GGACTC---AAATGGATTGTCACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---V-AVVAA-GL------------FWR-LMIASLVMLIAGYLGE---V------G--G-----------A----------------------DG---GSLWIC-FIIGMAGWIYILYEI-----F--A-GEASKINAS--E-GTAAS-K-T-A-F-N-GL-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928162 [unk-Proteo2-b] PRGD_OTU026_c575bd0ce5de213b0ccd01bea2d60117 gb|KJ928162| PRGD_OTU026_c575bd0ce5de213b0ccd01bea2d60117, putative proteorhodopsin gene, partial cds. PRGD_OTU026_c575bd0ce5de213b0ccd01bea2d60117, putative proteorhodopsin gene, partial cds. KJ928162 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) CTGTTAACCGTTCCTCTTCAAATAGTTGAATTTTATCTCATTTTAGCTGCCGTGGCTGTAGTGGCCGCCGGATTATTCTGGAGGCTCATGATCGCATCACTTGTTATGCTGATAGCGGGTTATTTAGGTGAAGTTGGTGGCGCCGATGGAGGGTCCTTATGGATCTGCTTCATTATTGGGATGGCCGGATGGATCTACATTCTATATGAGATTTTTGCTGGAGAGGCCAGTAAGATCAATGCAAGTGAAGGAACAGCTGCTTCAAAGACGGCATTTAACGGACTCAAATGGATTGTCACTATA LLTVPLQIVEFYLILAAVAVVAAGLFWRLMIASLVMLIAGYLGEVGGADGGSLWICFIIGMAGWIYILYEIFAGEASKINASEGTAASKTAFNGLKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACCGTTCCTCTTCAAATAGTTGAATTTTATCTCATTTTAGCTGCC---------GTG---GCTGTAGTGGCCGCC---GGATTA------------------------------------TTCTGGAGG---CTCATGATCGCATCACTTGTTATGCTGATAGCGGGTTATTTAGGTGAA---------GTT------------------GGT------GGC---------------------------------GCC------------------------------------------------------------------GATGGA---------GGGTCCTTATGGATCTGC---TTCATTATTGGGATGGCCGGATGGATCTACATTCTATATGAGATT---------------TTT------GCT---GGAGAGGCCAGTAAGATCAATGCAAGT------GAA---GGAACAGCTGCTTCA---AAG---ACG---GCA---TTT---AAC---GGACTC---AAATGGATTGTCACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---V-AVVAA-GL------------FWR-LMIASLVMLIAGYLGE---V------G--G-----------A----------------------DG---GSLWIC-FIIGMAGWIYILYEI-----F--A-GEASKINAS--E-GTAAS-K-T-A-F-N-GL-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928165 [unk-Proteo2-b] PRGD_OTU026_d3b8a9e269ae1bb0bc25390fed8d524e gb|KJ928165| PRGD_OTU026_d3b8a9e269ae1bb0bc25390fed8d524e, putative proteorhodopsin gene, partial cds. PRGD_OTU026_d3b8a9e269ae1bb0bc25390fed8d524e, putative proteorhodopsin gene, partial cds. KJ928165 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-33.28, 45.35) CTGTTAACCGTTCCTCTTCAAATAGTTGAATTTTATCTAATTTTAGCTGCCGTAGCAGTAGTCGCCGCCGCATTATTCTGGAGGCTCATGATCGCATCAATTATTATGCTGGTAGCCGGTTATTTAGGTGAAGTTGGTGGCGCTGATGGAGGATCCTTATGGATTTGCTTCATTATTGGGATGGCCGGATGGATCTACATTCTATATGAAATTTTTGCTGGAGAGGCGAGTAAGATCAATGCAAGTGAAGGAACACAAGCTTCAAAGACAGCATTTAACGGACTCAAATGGATTGTCACTATA LLTVPLQIVEFYLILAAVAVVAAALFWRLMIASIIMLVAGYLGEVGGADGGSLWICFIIGMAGWIYILYEIFAGEASKINASEGTQASKTAFNGLKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACCGTTCCTCTTCAAATAGTTGAATTTTATCTAATTTTAGCTGCC---------GTA---GCAGTAGTCGCCGCC---GCATTA------------------------------------TTCTGGAGG---CTCATGATCGCATCAATTATTATGCTGGTAGCCGGTTATTTAGGTGAA---------GTT------------------GGT------GGC---------------------------------GCT------------------------------------------------------------------GATGGA---------GGATCCTTATGGATTTGC---TTCATTATTGGGATGGCCGGATGGATCTACATTCTATATGAAATT---------------TTT------GCT---GGAGAGGCGAGTAAGATCAATGCAAGT------GAA---GGAACACAAGCTTCA---AAG---ACA---GCA---TTT---AAC---GGACTC---AAATGGATTGTCACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---V-AVVAA-AL------------FWR-LMIASIIMLVAGYLGE---V------G--G-----------A----------------------DG---GSLWIC-FIIGMAGWIYILYEI-----F--A-GEASKINAS--E-GTQAS-K-T-A-F-N-GL-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928161 [unk-Proteo2-b] PRGD_OTU026_bf981d3fb9f83a0af8023165a0b4fefd gb|KJ928161| PRGD_OTU026_bf981d3fb9f83a0af8023165a0b4fefd, putative proteorhodopsin gene, partial cds. PRGD_OTU026_bf981d3fb9f83a0af8023165a0b4fefd, putative proteorhodopsin gene, partial cds. KJ928161 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTATTAACCGTTCCTCTTCAAATAGTTGAATTTTATCTCATTTTAGCTGCCGTAGCCGCAGTCGCTGCCGGATTATTCTGGAGGCTCTTGGTCGCATCACTTGTTATGCTGGTAGCCGGTTATTTAGGTGAAGTTGGTGGCGCTGATGGAGGATCTTTATGGATCTGCTTCATTATTGGAATGGCCGGATGGATTTACATTCTATATGAAATTTTTGCTGGAGAGGCCAGTAAGATCAATGCAAGTGAGGGAACAAATGCTTCAAAGACAGCATTTAACGCACTCAAATGGATTGTCACTATA LLTVPLQIVEFYLILAAVAAVAAGLFWRLLVASLVMLVAGYLGEVGGADGGSLWICFIIGMAGWIYILYEIFAGEASKINASEGTNASKTAFNALKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACCGTTCCTCTTCAAATAGTTGAATTTTATCTCATTTTAGCTGCC---------GTA---GCCGCAGTCGCTGCC---GGATTA------------------------------------TTCTGGAGG---CTCTTGGTCGCATCACTTGTTATGCTGGTAGCCGGTTATTTAGGTGAA---------GTT------------------GGT------GGC---------------------------------GCT------------------------------------------------------------------GATGGA---------GGATCTTTATGGATCTGC---TTCATTATTGGAATGGCCGGATGGATTTACATTCTATATGAAATT---------------TTT------GCT---GGAGAGGCCAGTAAGATCAATGCAAGT------GAG---GGAACAAATGCTTCA---AAG---ACA---GCA---TTT---AAC---GCACTC---AAATGGATTGTCACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---V-AAVAA-GL------------FWR-LLVASLVMLVAGYLGE---V------G--G-----------A----------------------DG---GSLWIC-FIIGMAGWIYILYEI-----F--A-GEASKINAS--E-GTNAS-K-T-A-F-N-AL-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928147 [unk-Proteo2-b] PRGD_OTU026_5e04f81e606d3c55b96dcbb14cb1e63b gb|KJ928147| PRGD_OTU026_5e04f81e606d3c55b96dcbb14cb1e63b, putative proteorhodopsin gene, partial cds. PRGD_OTU026_5e04f81e606d3c55b96dcbb14cb1e63b, putative proteorhodopsin gene, partial cds. KJ928147 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-35.05, 23.73; -33.28, 45.35) CTGTTAACCGTTCCTCTTCAAATAGTTGAATTTTATCTCATTTTAGCTGCCGTAGCAGCAGTCGCCGCCGGATTATTCTGGAGGCTCATGATCGCATCCCTTGTGATGTTGATAGCTGGTTATCTAGGCGAAGTTGGCGGCGCGGATGGTGATATGTTGTGGATTTGGTTCATCATTGGAATGGCCGGTTGGATTTATATCCTTTATGAAATCTTTGCTGGTGAAGCTAGTAAGATCAATGCAAGCGAAGGAACAAATGCTTCAAAAACAGCATTTAATGCCCTCAAATGGATCGTGACCGTA LLTVPLQIVEFYLILAAVAAVAAGLFWRLMIASLVMLIAGYLGEVGGADGDMLWIWFIIGMAGWIYILYEIFAGEASKINASEGTNASKTAFNALKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACCGTTCCTCTTCAAATAGTTGAATTTTATCTCATTTTAGCTGCC---------GTA---GCAGCAGTCGCCGCC---GGATTA------------------------------------TTCTGGAGG---CTCATGATCGCATCCCTTGTGATGTTGATAGCTGGTTATCTAGGCGAA---------GTT------------------GGC------GGC---------------------------------GCG------------------------------------------------------------------GATGGT---------GATATGTTGTGGATTTGG---TTCATCATTGGAATGGCCGGTTGGATTTATATCCTTTATGAAATC---------------TTT------GCT---GGTGAAGCTAGTAAGATCAATGCAAGC------GAA---GGAACAAATGCTTCA---AAA---ACA---GCA---TTT---AAT---GCCCTC---AAATGGATCGTGACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---V-AAVAA-GL------------FWR-LMIASLVMLIAGYLGE---V------G--G-----------A----------------------DG---DMLWIW-FIIGMAGWIYILYEI-----F--A-GEASKINAS--E-GTNAS-K-T-A-F-N-AL-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928156 [unk-Proteo2-b] PRGD_OTU026_858402c90f581d29c7c2d781f65ccd98 gb|KJ928156| PRGD_OTU026_858402c90f581d29c7c2d781f65ccd98, putative proteorhodopsin gene, partial cds. PRGD_OTU026_858402c90f581d29c7c2d781f65ccd98, putative proteorhodopsin gene, partial cds. KJ928156 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) CTGTTAACCGTTCCTCTTCAAATAGTTGAATTTTATCTCATTTTAGCTGCCGTAGCAGCAGTCGCCGCCGGATTATTCTGGAGGCTCATGATCGCATCCATTGTGATGTTGATAGCTGGTTATCTAGGCGAAGTTGGCGGCGCAGATGGTGATATGTTATGGATTTGGTTCATCATTGGATTGGCCGGTTGGATTTATATCCTTTATGAAATCTTTGCTGGTGAAGCTAGTAAGATCAATGCAAGCGAAGGAACAAATGCATCAAAAACAGCATTTAATGCCCTCAAATGGATCGTTACCATA LLTVPLQIVEFYLILAAVAAVAAGLFWRLMIASIVMLIAGYLGEVGGADGDMLWIWFIIGLAGWIYILYEIFAGEASKINASEGTNASKTAFNALKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACCGTTCCTCTTCAAATAGTTGAATTTTATCTCATTTTAGCTGCC---------GTA---GCAGCAGTCGCCGCC---GGATTA------------------------------------TTCTGGAGG---CTCATGATCGCATCCATTGTGATGTTGATAGCTGGTTATCTAGGCGAA---------GTT------------------GGC------GGC---------------------------------GCA------------------------------------------------------------------GATGGT---------GATATGTTATGGATTTGG---TTCATCATTGGATTGGCCGGTTGGATTTATATCCTTTATGAAATC---------------TTT------GCT---GGTGAAGCTAGTAAGATCAATGCAAGC------GAA---GGAACAAATGCATCA---AAA---ACA---GCA---TTT---AAT---GCCCTC---AAATGGATCGTTACCATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---V-AAVAA-GL------------FWR-LMIASIVMLIAGYLGE---V------G--G-----------A----------------------DG---DMLWIW-FIIGLAGWIYILYEI-----F--A-GEASKINAS--E-GTNAS-K-T-A-F-N-AL-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928155 [unk-Proteo2-b] PRGD_OTU026_7fc46994bf80e4d5a431212dbb410242 gb|KJ928155| PRGD_OTU026_7fc46994bf80e4d5a431212dbb410242, putative proteorhodopsin gene, partial cds. PRGD_OTU026_7fc46994bf80e4d5a431212dbb410242, putative proteorhodopsin gene, partial cds. KJ928155 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTGTTAACCGTTCCTCTTCAAATAGTTGAATTTTATCTCATTTTAGCTGCCGTAGCAGCAGTCGCTGCCGGATTATTCTGGAGGCTCATGATTGCATCCCTTGTGATGTTGATAGCGGGTTATCTAGGCGAAGTTGGCGGCGCGGATGGTGATATGTTGTGGATTTGGTTCATCATTGGATTGGCCGGTTGGATTTATATCCTTTATGAAATCTTTGCTGGTGAAGCTAGTAAGATCAATGCAAGTGAAGGAACAAATGCATCAAAAACAGCATTTAATGCCCTCAAATGGATCGTTACCATA LLTVPLQIVEFYLILAAVAAVAAGLFWRLMIASLVMLIAGYLGEVGGADGDMLWIWFIIGLAGWIYILYEIFAGEASKINASEGTNASKTAFNALKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACCGTTCCTCTTCAAATAGTTGAATTTTATCTCATTTTAGCTGCC---------GTA---GCAGCAGTCGCTGCC---GGATTA------------------------------------TTCTGGAGG---CTCATGATTGCATCCCTTGTGATGTTGATAGCGGGTTATCTAGGCGAA---------GTT------------------GGC------GGC---------------------------------GCG------------------------------------------------------------------GATGGT---------GATATGTTGTGGATTTGG---TTCATCATTGGATTGGCCGGTTGGATTTATATCCTTTATGAAATC---------------TTT------GCT---GGTGAAGCTAGTAAGATCAATGCAAGT------GAA---GGAACAAATGCATCA---AAA---ACA---GCA---TTT---AAT---GCCCTC---AAATGGATCGTTACCATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---V-AAVAA-GL------------FWR-LMIASLVMLIAGYLGE---V------G--G-----------A----------------------DG---DMLWIW-FIIGLAGWIYILYEI-----F--A-GEASKINAS--E-GTNAS-K-T-A-F-N-AL-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928157 [unk-Proteo2-b] PRGD_OTU026_9c6d7940bd20dc8444fc44b3aabd5f54 gb|KJ928157| PRGD_OTU026_9c6d7940bd20dc8444fc44b3aabd5f54, putative proteorhodopsin gene, partial cds. PRGD_OTU026_9c6d7940bd20dc8444fc44b3aabd5f54, putative proteorhodopsin gene, partial cds. KJ928157 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGTTAACCGTTCCTCTTCAAATAGTTGAATTTTATCTCATTTTAGCTGCCGTAGCAGCAGTCGCTGCCGGATTATTCTGGAGGCTCATGATTGCATCCCTTGTGATGTTGATAGCGGGTTATCTAGGCGAAGTTGGCGGCGCGGATGGTGATATGTTGTGGATTTGTTTCATCATTGGAATGGCCGGTTGGATTTATATCCTTTATGAAATCTTTGCTGGTGAAGCTAGTAAGATCAATGCAAGTGAAGGAACAAATGCATCAAAAACAGCATTTAATGCCCTCAAATGGATCGTTACCATA LLTVPLQIVEFYLILAAVAAVAAGLFWRLMIASLVMLIAGYLGEVGGADGDMLWICFIIGMAGWIYILYEIFAGEASKINASEGTNASKTAFNALKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACCGTTCCTCTTCAAATAGTTGAATTTTATCTCATTTTAGCTGCC---------GTA---GCAGCAGTCGCTGCC---GGATTA------------------------------------TTCTGGAGG---CTCATGATTGCATCCCTTGTGATGTTGATAGCGGGTTATCTAGGCGAA---------GTT------------------GGC------GGC---------------------------------GCG------------------------------------------------------------------GATGGT---------GATATGTTGTGGATTTGT---TTCATCATTGGAATGGCCGGTTGGATTTATATCCTTTATGAAATC---------------TTT------GCT---GGTGAAGCTAGTAAGATCAATGCAAGT------GAA---GGAACAAATGCATCA---AAA---ACA---GCA---TTT---AAT---GCCCTC---AAATGGATCGTTACCATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---V-AAVAA-GL------------FWR-LMIASLVMLIAGYLGE---V------G--G-----------A----------------------DG---DMLWIC-FIIGMAGWIYILYEI-----F--A-GEASKINAS--E-GTNAS-K-T-A-F-N-AL-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928169 [unk-Proteo2-b] PRGD_OTU026_ed400c94f90b3ed34c44008d2a433cc4 gb|KJ928169| PRGD_OTU026_ed400c94f90b3ed34c44008d2a433cc4, putative proteorhodopsin gene, partial cds. PRGD_OTU026_ed400c94f90b3ed34c44008d2a433cc4, putative proteorhodopsin gene, partial cds. KJ928169 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTGTTAACTGTTCCTCTTCAAATAGTTGAATTTTATCTCATTTTAGCTGCCGTAGCAGCAGTCGCTGCCGGATTATTCTGGAGGCTCATGATCGCATCCCTTGTGATGTTGATAGCGGGTTATCTAGGCGAAGTTGGCGGCGCGGATGGTGATATGTTGTGGATTTGGTTCATCATTGGATTGGCCGGTTGGATTTATATCCTTTATGAAATCTTTGCTGGTGAAGCTAGTAAGATCAATGCAAGTGAAGGAACAAATGCATCAAAAACAGCATTTAATGCCCTCAAATGGATCGTTACCATA LLTVPLQIVEFYLILAAVAAVAAGLFWRLMIASLVMLIAGYLGEVGGADGDMLWIWFIIGLAGWIYILYEIFAGEASKINASEGTNASKTAFNALKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACTGTTCCTCTTCAAATAGTTGAATTTTATCTCATTTTAGCTGCC---------GTA---GCAGCAGTCGCTGCC---GGATTA------------------------------------TTCTGGAGG---CTCATGATCGCATCCCTTGTGATGTTGATAGCGGGTTATCTAGGCGAA---------GTT------------------GGC------GGC---------------------------------GCG------------------------------------------------------------------GATGGT---------GATATGTTGTGGATTTGG---TTCATCATTGGATTGGCCGGTTGGATTTATATCCTTTATGAAATC---------------TTT------GCT---GGTGAAGCTAGTAAGATCAATGCAAGT------GAA---GGAACAAATGCATCA---AAA---ACA---GCA---TTT---AAT---GCCCTC---AAATGGATCGTTACCATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---V-AAVAA-GL------------FWR-LMIASLVMLIAGYLGE---V------G--G-----------A----------------------DG---DMLWIW-FIIGLAGWIYILYEI-----F--A-GEASKINAS--E-GTNAS-K-T-A-F-N-AL-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928158 [unk-Proteo2-b] PRGD_OTU026_a050804e8011e52acd549450374b4854 gb|KJ928158| PRGD_OTU026_a050804e8011e52acd549450374b4854, putative proteorhodopsin gene, partial cds. PRGD_OTU026_a050804e8011e52acd549450374b4854, putative proteorhodopsin gene, partial cds. KJ928158 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) CTGTTAACTGTTCCTCTTCAAATAGTTGAATTTTATCTCATTTTAGCTGCCGTAGCAGCAGTCGCTGCCGGATTATTCTGGAGGCTCATGATCGCATCCATTGTGATGTTGATAGCGGGTTATCTAGGCGAAGTTGGCGGCGCGGATGGCGATATGTTGTGGATTTGGTTCATCATTGGATTGGCCGGTTGGATTTATATCCTTTATGAAATCTTTGCTGGTGAAGCTAGTAAGATCAATGCAAGTGAAGGAACAAATGCATCAAAAACAGCATTTAATGCCCTCAAATGGATCGTTACCATA LLTVPLQIVEFYLILAAVAAVAAGLFWRLMIASIVMLIAGYLGEVGGADGDMLWIWFIIGLAGWIYILYEIFAGEASKINASEGTNASKTAFNALKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACTGTTCCTCTTCAAATAGTTGAATTTTATCTCATTTTAGCTGCC---------GTA---GCAGCAGTCGCTGCC---GGATTA------------------------------------TTCTGGAGG---CTCATGATCGCATCCATTGTGATGTTGATAGCGGGTTATCTAGGCGAA---------GTT------------------GGC------GGC---------------------------------GCG------------------------------------------------------------------GATGGC---------GATATGTTGTGGATTTGG---TTCATCATTGGATTGGCCGGTTGGATTTATATCCTTTATGAAATC---------------TTT------GCT---GGTGAAGCTAGTAAGATCAATGCAAGT------GAA---GGAACAAATGCATCA---AAA---ACA---GCA---TTT---AAT---GCCCTC---AAATGGATCGTTACCATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---V-AAVAA-GL------------FWR-LMIASIVMLIAGYLGE---V------G--G-----------A----------------------DG---DMLWIW-FIIGLAGWIYILYEI-----F--A-GEASKINAS--E-GTNAS-K-T-A-F-N-AL-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928167 [unk-Proteo2-b] PRGD_OTU026_dd74261d7e246765e4fd8f83b8afce50 gb|KJ928167| PRGD_OTU026_dd74261d7e246765e4fd8f83b8afce50, putative proteorhodopsin gene, partial cds. PRGD_OTU026_dd74261d7e246765e4fd8f83b8afce50, putative proteorhodopsin gene, partial cds. KJ928167 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -33.28, 45.35) CTGCTAACTGTTCCTCTACAAATAGTTGAGTTTTATCTCATATTGGCTGCAGTCGCGGCGGTAGCAGCTGGATTATTCTGGCGATTGCTAATCGCATCCCTTGTGATGTTGATAGCTGGTTATCTAGGCGAAGTTGGCGGCGCAGATGGTGATATGTTGTGGATTTGGTTCATCATTGGGATGGCCGGTTGGATTTATATCCTTTATGAAATCTTTGCTGGTGAAGCTAGTAAGATCAATGCAAGTGAAGGAACAAATGCATCAAAAACAGCATTTAATGCCCTCAAATGGATCGTTACCATA LLTVPLQIVEFYLILAAVAAVAAGLFWRLLIASLVMLIAGYLGEVGGADGDMLWIWFIIGMAGWIYILYEIFAGEASKINASEGTNASKTAFNALKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTAACTGTTCCTCTACAAATAGTTGAGTTTTATCTCATATTGGCTGCA---------GTC---GCGGCGGTAGCAGCT---GGATTA------------------------------------TTCTGGCGA---TTGCTAATCGCATCCCTTGTGATGTTGATAGCTGGTTATCTAGGCGAA---------GTT------------------GGC------GGC---------------------------------GCA------------------------------------------------------------------GATGGT---------GATATGTTGTGGATTTGG---TTCATCATTGGGATGGCCGGTTGGATTTATATCCTTTATGAAATC---------------TTT------GCT---GGTGAAGCTAGTAAGATCAATGCAAGT------GAA---GGAACAAATGCATCA---AAA---ACA---GCA---TTT---AAT---GCCCTC---AAATGGATCGTTACCATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---V-AAVAA-GL------------FWR-LLIASLVMLIAGYLGE---V------G--G-----------A----------------------DG---DMLWIW-FIIGMAGWIYILYEI-----F--A-GEASKINAS--E-GTNAS-K-T-A-F-N-AL-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928160 [unk-Proteo2-b] PRGD_OTU026_a9fc8f4ba2a432ff748f8188d73b6b52 gb|KJ928160| PRGD_OTU026_a9fc8f4ba2a432ff748f8188d73b6b52, putative proteorhodopsin gene, partial cds. PRGD_OTU026_a9fc8f4ba2a432ff748f8188d73b6b52, putative proteorhodopsin gene, partial cds. KJ928160 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTCTAACTGTTCCTCTGCAAATAGTTGAGTTTTACCTCATATTGGCTGCAGTCGCGGCGGTAGCAGCTGGATTATTCTGGCGATTGCTAATTGCATCCCTTGTGATGTTGATAGCTGGTTATTTAGGTGAAGTTGGCGGCGCAGATGGTGACATGTTATGGATTTGTTTCATCATTGGAATGGCCGGTTGGATTTATATCCTTTATGAAATCTTTGCTGGCGAAGCTAGTAAGATCAATGCAAGTGAAGGAACAAATGCATCAAAAACAGCATTTAATGCCCTCAAATGGATCGTTACCATA LLTVPLQIVEFYLILAAVAAVAAGLFWRLLIASLVMLIAGYLGEVGGADGDMLWICFIIGMAGWIYILYEIFAGEASKINASEGTNASKTAFNALKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTAACTGTTCCTCTGCAAATAGTTGAGTTTTACCTCATATTGGCTGCA---------GTC---GCGGCGGTAGCAGCT---GGATTA------------------------------------TTCTGGCGA---TTGCTAATTGCATCCCTTGTGATGTTGATAGCTGGTTATTTAGGTGAA---------GTT------------------GGC------GGC---------------------------------GCA------------------------------------------------------------------GATGGT---------GACATGTTATGGATTTGT---TTCATCATTGGAATGGCCGGTTGGATTTATATCCTTTATGAAATC---------------TTT------GCT---GGCGAAGCTAGTAAGATCAATGCAAGT------GAA---GGAACAAATGCATCA---AAA---ACA---GCA---TTT---AAT---GCCCTC---AAATGGATCGTTACCATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---V-AAVAA-GL------------FWR-LLIASLVMLIAGYLGE---V------G--G-----------A----------------------DG---DMLWIC-FIIGMAGWIYILYEI-----F--A-GEASKINAS--E-GTNAS-K-T-A-F-N-AL-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928168 [unk-Proteo2-b] PRGD_OTU026_de8150b046327b26fbefebb3a1586a84 gb|KJ928168| PRGD_OTU026_de8150b046327b26fbefebb3a1586a84, putative proteorhodopsin gene, partial cds. PRGD_OTU026_de8150b046327b26fbefebb3a1586a84, putative proteorhodopsin gene, partial cds. KJ928168 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -33.28, 45.35) CTGCTAACTGTTCCTCTACAAATAGTTGAGTTTTATCTCATATTGGCTGCAGTCGCGGCGGTAGCAGCTGGATTATTCTGGCGATTGCTGATCGCATCCCTTGTGATGTTGATAGCTGGTTATCTAGGCGAAGTTGGCGGCGCAGATGGTGATATGTTGTGGATTTGGTTCATCATTGGAATGGCCGGTTGGATTTATATCCTTTATGAAATCTTTGCTGGTGAAGCTAGTAAGATCAATGCAAGTGAAGGAACAAATGCATCAAAAACAGCATTTAATGCACTCAAATGGATCGTTACCATA LLTVPLQIVEFYLILAAVAAVAAGLFWRLLIASLVMLIAGYLGEVGGADGDMLWIWFIIGMAGWIYILYEIFAGEASKINASEGTNASKTAFNALKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTAACTGTTCCTCTACAAATAGTTGAGTTTTATCTCATATTGGCTGCA---------GTC---GCGGCGGTAGCAGCT---GGATTA------------------------------------TTCTGGCGA---TTGCTGATCGCATCCCTTGTGATGTTGATAGCTGGTTATCTAGGCGAA---------GTT------------------GGC------GGC---------------------------------GCA------------------------------------------------------------------GATGGT---------GATATGTTGTGGATTTGG---TTCATCATTGGAATGGCCGGTTGGATTTATATCCTTTATGAAATC---------------TTT------GCT---GGTGAAGCTAGTAAGATCAATGCAAGT------GAA---GGAACAAATGCATCA---AAA---ACA---GCA---TTT---AAT---GCACTC---AAATGGATCGTTACCATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---V-AAVAA-GL------------FWR-LLIASLVMLIAGYLGE---V------G--G-----------A----------------------DG---DMLWIW-FIIGMAGWIYILYEI-----F--A-GEASKINAS--E-GTNAS-K-T-A-F-N-AL-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928150 [unk-Proteo2-b] PRGD_OTU026_67ae8647e042f92845a801e20afcba15 gb|KJ928150| PRGD_OTU026_67ae8647e042f92845a801e20afcba15, putative proteorhodopsin gene, partial cds. PRGD_OTU026_67ae8647e042f92845a801e20afcba15, putative proteorhodopsin gene, partial cds. KJ928150 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGCTAACTGTTCCTCTGCAAATAGTTGAGTTTTATCTCATATTGGCTGCAGTCGCGGCGGTAGCAGCTGGATTATTCTGGCGATTGCTGATCGCATCCCTTGTGATGTTGATAGCTGGTTATCTAGGCGAAGTTGGCGGCGCAGATGGTGATATGTTGTGGATTTGGTTCATCATTGGAATGGCCGGTTGGATTTATATCCTTTATGAAATCTTTGCTGGTGAAGCTAGTAAGATCAATGCAAGTGAAGGAACAAATGCATCAAAAACAGCATTTAATGCGCTCAAATGGATCGTTACTATA LLTVPLQIVEFYLILAAVAAVAAGLFWRLLIASLVMLIAGYLGEVGGADGDMLWIWFIIGMAGWIYILYEIFAGEASKINASEGTNASKTAFNALKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTAACTGTTCCTCTGCAAATAGTTGAGTTTTATCTCATATTGGCTGCA---------GTC---GCGGCGGTAGCAGCT---GGATTA------------------------------------TTCTGGCGA---TTGCTGATCGCATCCCTTGTGATGTTGATAGCTGGTTATCTAGGCGAA---------GTT------------------GGC------GGC---------------------------------GCA------------------------------------------------------------------GATGGT---------GATATGTTGTGGATTTGG---TTCATCATTGGAATGGCCGGTTGGATTTATATCCTTTATGAAATC---------------TTT------GCT---GGTGAAGCTAGTAAGATCAATGCAAGT------GAA---GGAACAAATGCATCA---AAA---ACA---GCA---TTT---AAT---GCGCTC---AAATGGATCGTTACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---V-AAVAA-GL------------FWR-LLIASLVMLIAGYLGE---V------G--G-----------A----------------------DG---DMLWIW-FIIGMAGWIYILYEI-----F--A-GEASKINAS--E-GTNAS-K-T-A-F-N-AL-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928142 [unk-Proteo2-b] PRGD_OTU026_210ce64923583edfbc96233d49b0bd68 gb|KJ928142| PRGD_OTU026_210ce64923583edfbc96233d49b0bd68, putative proteorhodopsin gene, partial cds. PRGD_OTU026_210ce64923583edfbc96233d49b0bd68, putative proteorhodopsin gene, partial cds. KJ928142 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) CTTTTAACTGTTCCTCTTCAAATAGTTGAGTTTTATCTAATATTGGCTGCAGTAGCGGCGGTAGCAGCTGGGCTATTCTGGCGGCTGCTTATCGGATCGCTCGTGATGTTGATAGCCGGCTATTTAGGTGAAGTTGGCGGCGCAGATAGTGGTATGGTCTGGATTTGGTTCGCCATTGGAATGGCCGGTTGGCTTTATATCCTTTATGAAATCTTTGCCGGAGAAGCTAGCAAGATCAATGCAAGTGAAGGAACAAATGCATCAAAGACAGCTTTTAATGCTCTCAAATGGATCGTTACCATA LLTVPLQIVEFYLILAAVAAVAAGLFWRLLIGSLVMLIAGYLGEVGGADSGMVWIWFAIGMAGWLYILYEIFAGEASKINASEGTNASKTAFNALKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTAACTGTTCCTCTTCAAATAGTTGAGTTTTATCTAATATTGGCTGCA---------GTA---GCGGCGGTAGCAGCT---GGGCTA------------------------------------TTCTGGCGG---CTGCTTATCGGATCGCTCGTGATGTTGATAGCCGGCTATTTAGGTGAA---------GTT------------------GGC------GGC---------------------------------GCA------------------------------------------------------------------GATAGT---------GGTATGGTCTGGATTTGG---TTCGCCATTGGAATGGCCGGTTGGCTTTATATCCTTTATGAAATC---------------TTT------GCC---GGAGAAGCTAGCAAGATCAATGCAAGT------GAA---GGAACAAATGCATCA---AAG---ACA---GCT---TTT---AAT---GCTCTC---AAATGGATCGTTACCATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---V-AAVAA-GL------------FWR-LLIGSLVMLIAGYLGE---V------G--G-----------A----------------------DS---GMVWIW-FAIGMAGWLYILYEI-----F--A-GEASKINAS--E-GTNAS-K-T-A-F-N-AL-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928151 [unk-Proteo2-b] PRGD_OTU026_6b9e9a70d91025bab6f6efd5fddf4dea gb|KJ928151| PRGD_OTU026_6b9e9a70d91025bab6f6efd5fddf4dea, putative proteorhodopsin gene, partial cds. PRGD_OTU026_6b9e9a70d91025bab6f6efd5fddf4dea, putative proteorhodopsin gene, partial cds. KJ928151 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-33.28, 45.35) CTGTTAACTGTTCCTCTACAAATCGTTGAATTTTATCTCATTCTAGCTGCGGTAGCAACCGTAGCCGCTGCCCTATTCTGGCGACTTTTTGTAGCATCGCTCGTGATGTTGATTGCTGGGTACCTGGGTGAAGTTGGCGGTGCCGATGGCGATATGCTGTGGATTTGGTTCATCATTGGAATGGCTGGTTGGATTTATATCCTTTATGAAATCTTTGCTGGAGAAGCTAGCAAGATCAATGCGAGTGAAGGAACAAATGCATCAAAAACAGCTTTTAATGCTCTCAAATGGATCGTTACTATA LLTVPLQIVEFYLILAAVATVAAALFWRLFVASLVMLIAGYLGEVGGADGDMLWIWFIIGMAGWIYILYEIFAGEASKINASEGTNASKTAFNALKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACTGTTCCTCTACAAATCGTTGAATTTTATCTCATTCTAGCTGCG---------GTA---GCAACCGTAGCCGCT---GCCCTA------------------------------------TTCTGGCGA---CTTTTTGTAGCATCGCTCGTGATGTTGATTGCTGGGTACCTGGGTGAA---------GTT------------------GGC------GGT---------------------------------GCC------------------------------------------------------------------GATGGC---------GATATGCTGTGGATTTGG---TTCATCATTGGAATGGCTGGTTGGATTTATATCCTTTATGAAATC---------------TTT------GCT---GGAGAAGCTAGCAAGATCAATGCGAGT------GAA---GGAACAAATGCATCA---AAA---ACA---GCT---TTT---AAT---GCTCTC---AAATGGATCGTTACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---V-ATVAA-AL------------FWR-LFVASLVMLIAGYLGE---V------G--G-----------A----------------------DG---DMLWIW-FIIGMAGWIYILYEI-----F--A-GEASKINAS--E-GTNAS-K-T-A-F-N-AL-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928153 [unk-Proteo2-b] PRGD_OTU026_6ff5955b48dd8ccae019e3cc89196506 gb|KJ928153| PRGD_OTU026_6ff5955b48dd8ccae019e3cc89196506, putative proteorhodopsin gene, partial cds. PRGD_OTU026_6ff5955b48dd8ccae019e3cc89196506, putative proteorhodopsin gene, partial cds. KJ928153 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73) CTTTTAACTGTTCCTCTGCAAATAGTTGAATTTTATCTCATCCTAGCTGCAGTGGCAGCGGTAGCGGCTGGATTATTCTGGCGACTGCTTATCGCGTCACTTGTAATGTTAATAGCCGGCTACCTGGGTGAAGTTGGCGGCGCAGATGGCGATATGCTGTGGATTTGGTTCATCATTGGAATGGCTGGTTGGATTTATATCCTTTATGAAATCTTTGCTGGAGAAGCTAGCAAGATCAATGCGAGTGAAGGAACAAATGCATCAAAAACAGCTTTTAATGCTCTCAAATGGATCGTTACTATA LLTVPLQIVEFYLILAAVAAVAAGLFWRLLIASLVMLIAGYLGEVGGADGDMLWIWFIIGMAGWIYILYEIFAGEASKINASEGTNASKTAFNALKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTAACTGTTCCTCTGCAAATAGTTGAATTTTATCTCATCCTAGCTGCA---------GTG---GCAGCGGTAGCGGCT---GGATTA------------------------------------TTCTGGCGA---CTGCTTATCGCGTCACTTGTAATGTTAATAGCCGGCTACCTGGGTGAA---------GTT------------------GGC------GGC---------------------------------GCA------------------------------------------------------------------GATGGC---------GATATGCTGTGGATTTGG---TTCATCATTGGAATGGCTGGTTGGATTTATATCCTTTATGAAATC---------------TTT------GCT---GGAGAAGCTAGCAAGATCAATGCGAGT------GAA---GGAACAAATGCATCA---AAA---ACA---GCT---TTT---AAT---GCTCTC---AAATGGATCGTTACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---V-AAVAA-GL------------FWR-LLIASLVMLIAGYLGE---V------G--G-----------A----------------------DG---DMLWIW-FIIGMAGWIYILYEI-----F--A-GEASKINAS--E-GTNAS-K-T-A-F-N-AL-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928163 [unk-Proteo2-b] PRGD_OTU026_c7305e417fa34874a85ed2b88889fa02 gb|KJ928163| PRGD_OTU026_c7305e417fa34874a85ed2b88889fa02, putative proteorhodopsin gene, partial cds. PRGD_OTU026_c7305e417fa34874a85ed2b88889fa02, putative proteorhodopsin gene, partial cds. KJ928163 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTTTAACTGTTCCTCTGCAAATAGTTGAATTTTATCTCATCTTAGCTGCAGTGGCAGCGGTAGCGGCTGGATTATTCTGGCGACTGCTTATCGCGTCACTTGTAATGTTAATAGCCGGCTACCTGGGTGAAGTTGGCGGCGCAGATGGCGATATGCTATGGATTTGGTTCATCATTGGAATGGCTGGTTGGATTTATATCCTTTATGAAATCTTTGCTGGAGAAGCTAGCAAGATCAATGCGAGTGAAGGAACAAATGCATCAAAAACAGCTTTTAATGCTCTCAAATGGATCGTTACTATA LLTVPLQIVEFYLILAAVAAVAAGLFWRLLIASLVMLIAGYLGEVGGADGDMLWIWFIIGMAGWIYILYEIFAGEASKINASEGTNASKTAFNALKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTAACTGTTCCTCTGCAAATAGTTGAATTTTATCTCATCTTAGCTGCA---------GTG---GCAGCGGTAGCGGCT---GGATTA------------------------------------TTCTGGCGA---CTGCTTATCGCGTCACTTGTAATGTTAATAGCCGGCTACCTGGGTGAA---------GTT------------------GGC------GGC---------------------------------GCA------------------------------------------------------------------GATGGC---------GATATGCTATGGATTTGG---TTCATCATTGGAATGGCTGGTTGGATTTATATCCTTTATGAAATC---------------TTT------GCT---GGAGAAGCTAGCAAGATCAATGCGAGT------GAA---GGAACAAATGCATCA---AAA---ACA---GCT---TTT---AAT---GCTCTC---AAATGGATCGTTACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---V-AAVAA-GL------------FWR-LLIASLVMLIAGYLGE---V------G--G-----------A----------------------DG---DMLWIW-FIIGMAGWIYILYEI-----F--A-GEASKINAS--E-GTNAS-K-T-A-F-N-AL-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928164 [unk-Proteo2-b] PRGD_OTU026_cf38608ecdc882c67139861adbb13350 gb|KJ928164| PRGD_OTU026_cf38608ecdc882c67139861adbb13350, putative proteorhodopsin gene, partial cds. PRGD_OTU026_cf38608ecdc882c67139861adbb13350, putative proteorhodopsin gene, partial cds. KJ928164 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTATTGACTGTTCCTCTGCAAATAGTCGAGTTTTATTTGATATTAGCCGCAGTTGCAGCGGTGGCTGCTGCTTTATTCTGGCGCCTCTTGATCGCTTCACTTGTGATGCTAATCGCAGGATACTTGGGTGAAGTAGGTGGACAGGATGGGTCTGGCCTATGGATCTACTTTATCATTGGAATGGCCGGATGGTTGTATATCCTGTATGAAATTTTTGCTGGCGAGGCGAGCAAAATAAATGCTAGCGAGGGCACCAACGCCTCGAAAACGGCATTCAACGCTCTGAAATGGATTGTAACGGTT LLTVPLQIVEFYLILAAVAAVAAALFWRLLIASLVMLIAGYLGEVGGQDGSGLWIYFIIGMAGWLYILYEIFAGEASKINASEGTNASKTAFNALKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTGACTGTTCCTCTGCAAATAGTCGAGTTTTATTTGATATTAGCCGCA---------GTT---GCAGCGGTGGCTGCT---GCTTTA------------------------------------TTCTGGCGC---CTCTTGATCGCTTCACTTGTGATGCTAATCGCAGGATACTTGGGTGAA---------GTA------------------GGT------GGA---------------------------------CAG------------------------------------------------------------------GATGGG---------TCTGGCCTATGGATCTAC---TTTATCATTGGAATGGCCGGATGGTTGTATATCCTGTATGAAATT---------------TTT------GCT---GGCGAGGCGAGCAAAATAAATGCTAGC------GAG---GGCACCAACGCCTCG---AAA---ACG---GCA---TTC---AAC---GCTCTG---AAATGGATTGTAACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---V-AAVAA-AL------------FWR-LLIASLVMLIAGYLGE---V------G--G-----------Q----------------------DG---SGLWIY-FIIGMAGWLYILYEI-----F--A-GEASKINAS--E-GTNAS-K-T-A-F-N-AL-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928172 [unk-Proteo2-b] PRGD_OTU026_f9ed94c8b5285a835f2962152d3be29f gb|KJ928172| PRGD_OTU026_f9ed94c8b5285a835f2962152d3be29f, putative proteorhodopsin gene, partial cds. PRGD_OTU026_f9ed94c8b5285a835f2962152d3be29f, putative proteorhodopsin gene, partial cds. KJ928172 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTATTGACTGTTCCTCTGCAAATAGTCGAGTTTTATTTGATATTAGCCGCAGTTGCAGCGGTGGCTGCTGCTTTATTCTGGCGCCTCTTGATTGCTTCACTTGTGATGCTAATCGCAGGATACTTGGGTGAGGTAGGTGGACAGGATGGGTCCGGCCTATGGATCTACTTTATCATTGGAATGGCAGGATGGTTGTATATCCTGTATGAAATTTTTGCCGGCGAGGCGAGCAAAATAAACGCTAGCGAGGGCACCAACGCGTCGAAAACTGCATTCAACGCTCTGAAATGGATTGTAACGGTT LLTVPLQIVEFYLILAAVAAVAAALFWRLLIASLVMLIAGYLGEVGGQDGSGLWIYFIIGMAGWLYILYEIFAGEASKINASEGTNASKTAFNALKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTGACTGTTCCTCTGCAAATAGTCGAGTTTTATTTGATATTAGCCGCA---------GTT---GCAGCGGTGGCTGCT---GCTTTA------------------------------------TTCTGGCGC---CTCTTGATTGCTTCACTTGTGATGCTAATCGCAGGATACTTGGGTGAG---------GTA------------------GGT------GGA---------------------------------CAG------------------------------------------------------------------GATGGG---------TCCGGCCTATGGATCTAC---TTTATCATTGGAATGGCAGGATGGTTGTATATCCTGTATGAAATT---------------TTT------GCC---GGCGAGGCGAGCAAAATAAACGCTAGC------GAG---GGCACCAACGCGTCG---AAA---ACT---GCA---TTC---AAC---GCTCTG---AAATGGATTGTAACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---V-AAVAA-AL------------FWR-LLIASLVMLIAGYLGE---V------G--G-----------Q----------------------DG---SGLWIY-FIIGMAGWLYILYEI-----F--A-GEASKINAS--E-GTNAS-K-T-A-F-N-AL-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928146 [unk-Proteo2-b] PRGD_OTU026_568ecdda6c7b88c2048f518c401e1bcc gb|KJ928146| PRGD_OTU026_568ecdda6c7b88c2048f518c401e1bcc, putative proteorhodopsin gene, partial cds. PRGD_OTU026_568ecdda6c7b88c2048f518c401e1bcc, putative proteorhodopsin gene, partial cds. KJ928146 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTATTGACTGTTCCTCTGCAAATAGTCGAGTTTTATTTGATATTAGCCGCAGTTGCAGCGGTGGCTGCTGCTTTATTCTGGCGCCTCTTGATCGCTTCACTTGTGATGCTAATCGCGGGATATTTGGGTGAAGTAGGTGGACAGGATGGGTCCGGCCTATGGATCTACTTTATCATTGGAATGGCCGGATGGTTGTATATCCTGTATGAAATTTTTGCCGGCGAGGCGAGCAAAATAAATGCTAGCGAAGGCACCAACGCCTCGAAAACTGCATTCAACGCTCTGAAATGGATTGTAACGGTT LLTVPLQIVEFYLILAAVAAVAAALFWRLLIASLVMLIAGYLGEVGGQDGSGLWIYFIIGMAGWLYILYEIFAGEASKINASEGTNASKTAFNALKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTGACTGTTCCTCTGCAAATAGTCGAGTTTTATTTGATATTAGCCGCA---------GTT---GCAGCGGTGGCTGCT---GCTTTA------------------------------------TTCTGGCGC---CTCTTGATCGCTTCACTTGTGATGCTAATCGCGGGATATTTGGGTGAA---------GTA------------------GGT------GGA---------------------------------CAG------------------------------------------------------------------GATGGG---------TCCGGCCTATGGATCTAC---TTTATCATTGGAATGGCCGGATGGTTGTATATCCTGTATGAAATT---------------TTT------GCC---GGCGAGGCGAGCAAAATAAATGCTAGC------GAA---GGCACCAACGCCTCG---AAA---ACT---GCA---TTC---AAC---GCTCTG---AAATGGATTGTAACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---V-AAVAA-AL------------FWR-LLIASLVMLIAGYLGE---V------G--G-----------Q----------------------DG---SGLWIY-FIIGMAGWLYILYEI-----F--A-GEASKINAS--E-GTNAS-K-T-A-F-N-AL-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928143 [unk-Proteo2-b] PRGD_OTU026_43794e86706d97042ac638e345261e36 gb|KJ928143| PRGD_OTU026_43794e86706d97042ac638e345261e36, putative proteorhodopsin gene, partial cds. PRGD_OTU026_43794e86706d97042ac638e345261e36, putative proteorhodopsin gene, partial cds. KJ928143 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTATTGACCGTTCCTCTGCAAATAGTCGAGTTTTATTTGATATTAGCCGCAGTCGCAGCGGTGGCTGCTGCTTTATTCTGGCGCCTCTTGATCGCTTCACTTGTGATGCTAATCGCAGGATATTTAGGTGAAGTAGGTGGACAGGATGGGTCCGGCCTATGGATCTACTTTATCATTGGAATGGCCGGATGGTTATATATCCTGTACGAAATTTTTGCCGGCGAGGCGAGCAAAATAAACGCTAGCGAGGGCACCAACGCCTCGAAAACTGCATTTAACGCTCTAAAATGGATCGTAACGGTT LLTVPLQIVEFYLILAAVAAVAAALFWRLLIASLVMLIAGYLGEVGGQDGSGLWIYFIIGMAGWLYILYEIFAGEASKINASEGTNASKTAFNALKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTGACCGTTCCTCTGCAAATAGTCGAGTTTTATTTGATATTAGCCGCA---------GTC---GCAGCGGTGGCTGCT---GCTTTA------------------------------------TTCTGGCGC---CTCTTGATCGCTTCACTTGTGATGCTAATCGCAGGATATTTAGGTGAA---------GTA------------------GGT------GGA---------------------------------CAG------------------------------------------------------------------GATGGG---------TCCGGCCTATGGATCTAC---TTTATCATTGGAATGGCCGGATGGTTATATATCCTGTACGAAATT---------------TTT------GCC---GGCGAGGCGAGCAAAATAAACGCTAGC------GAG---GGCACCAACGCCTCG---AAA---ACT---GCA---TTT---AAC---GCTCTA---AAATGGATCGTAACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---V-AAVAA-AL------------FWR-LLIASLVMLIAGYLGE---V------G--G-----------Q----------------------DG---SGLWIY-FIIGMAGWLYILYEI-----F--A-GEASKINAS--E-GTNAS-K-T-A-F-N-AL-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928138 [unk-Proteo2-b] PRGD_OTU026_09cbe8821343a1f3be4f8fd66f5032f5 gb|KJ928138| PRGD_OTU026_09cbe8821343a1f3be4f8fd66f5032f5, putative proteorhodopsin gene, partial cds. PRGD_OTU026_09cbe8821343a1f3be4f8fd66f5032f5, putative proteorhodopsin gene, partial cds. KJ928138 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTATTGACTGTTCCTCTACAGATAGTCGAATTTTATTTAATATTAGCCGCAGTTGCAGCGGTAGCTGCTGCTTTATTCTGGCGCCTTTTGATCGCCTCACTTGTAATGTTGATTGCAGGTTACTTGGGTGAAGTAGGTGGACAGGATGGGTCCGGCCTTTGGATCTACTTTATCATTGGGATGGCAGGATGGTTGTATATCCTGTACGAAATTTTTGCCGGCGAGGCTAGCAAAATTAATGCTAGCGAGGGCACCAACGCCTCGAAAACTGCATTCAACGCTCTTAAGTGGATTGTAACAGTT LLTVPLQIVEFYLILAAVAAVAAALFWRLLIASLVMLIAGYLGEVGGQDGSGLWIYFIIGMAGWLYILYEIFAGEASKINASEGTNASKTAFNALKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTGACTGTTCCTCTACAGATAGTCGAATTTTATTTAATATTAGCCGCA---------GTT---GCAGCGGTAGCTGCT---GCTTTA------------------------------------TTCTGGCGC---CTTTTGATCGCCTCACTTGTAATGTTGATTGCAGGTTACTTGGGTGAA---------GTA------------------GGT------GGA---------------------------------CAG------------------------------------------------------------------GATGGG---------TCCGGCCTTTGGATCTAC---TTTATCATTGGGATGGCAGGATGGTTGTATATCCTGTACGAAATT---------------TTT------GCC---GGCGAGGCTAGCAAAATTAATGCTAGC------GAG---GGCACCAACGCCTCG---AAA---ACT---GCA---TTC---AAC---GCTCTT---AAGTGGATTGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---V-AAVAA-AL------------FWR-LLIASLVMLIAGYLGE---V------G--G-----------Q----------------------DG---SGLWIY-FIIGMAGWLYILYEI-----F--A-GEASKINAS--E-GTNAS-K-T-A-F-N-AL-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928140 [unk-Proteo2-b] PRGD_OTU026_183bbd082e9e1497222626da3a56704c gb|KJ928140| PRGD_OTU026_183bbd082e9e1497222626da3a56704c, putative proteorhodopsin gene, partial cds. PRGD_OTU026_183bbd082e9e1497222626da3a56704c, putative proteorhodopsin gene, partial cds. KJ928140 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTATTGACTGTTCCTCTACAAATAGTTGAATTTTATTTAATATTAGCCGCAGTTGCAGCGGTAGCTGCTGCTTTATTCTGGCGCCTTTTGATCGCCTCACTTGTAATGTTAATTGCAGGATACTTAGGTGAAGTAGGTGGACAGGATGGGTCCGGTCTTTGGATCTACTTTATCATTGGAATGGCCGGATGGTTGTATATCCTATACGAAATCTTTGCCGGCGAGGCGAGCAAAATTAATGCTAGCGAAGGCACCAACGCCTCGAAAACTGCATTCAACGCTCTTAAATGGATTGTGACAGTT LLTVPLQIVEFYLILAAVAAVAAALFWRLLIASLVMLIAGYLGEVGGQDGSGLWIYFIIGMAGWLYILYEIFAGEASKINASEGTNASKTAFNALKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTGACTGTTCCTCTACAAATAGTTGAATTTTATTTAATATTAGCCGCA---------GTT---GCAGCGGTAGCTGCT---GCTTTA------------------------------------TTCTGGCGC---CTTTTGATCGCCTCACTTGTAATGTTAATTGCAGGATACTTAGGTGAA---------GTA------------------GGT------GGA---------------------------------CAG------------------------------------------------------------------GATGGG---------TCCGGTCTTTGGATCTAC---TTTATCATTGGAATGGCCGGATGGTTGTATATCCTATACGAAATC---------------TTT------GCC---GGCGAGGCGAGCAAAATTAATGCTAGC------GAA---GGCACCAACGCCTCG---AAA---ACT---GCA---TTC---AAC---GCTCTT---AAATGGATTGTGACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---V-AAVAA-AL------------FWR-LLIASLVMLIAGYLGE---V------G--G-----------Q----------------------DG---SGLWIY-FIIGMAGWLYILYEI-----F--A-GEASKINAS--E-GTNAS-K-T-A-F-N-AL-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928139 [unk-Proteo2-b] PRGD_OTU026_0b3c48c49e90668c8496627476709919 gb|KJ928139| PRGD_OTU026_0b3c48c49e90668c8496627476709919, putative proteorhodopsin gene, partial cds. PRGD_OTU026_0b3c48c49e90668c8496627476709919, putative proteorhodopsin gene, partial cds. KJ928139 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTATTGACTGTTCCTCTACAAATAGTTGAATTTTATTTAATATTAGCCGCAGTTGCAGCGGTAGCTGCTGCTTTATTCTGGCGCCTTTTGATCGCCTCACTTGTAATGTTGATTGCAGGATACTTGGGTGAAGTAGGTGGACAGGATGGGTCCGGCCTTTGGATCTACTTTATCATTGGAATGGCAGGATGGTTGTATATCCTGTACGAAATTTTTGCTGGCGAAGCGAGCAAAATTAATGCAAGCGAAGGCACCAACGCCTCGAAAACTGCATTCAACGCTCTAAAATGGATTGTAACAGTT LLTVPLQIVEFYLILAAVAAVAAALFWRLLIASLVMLIAGYLGEVGGQDGSGLWIYFIIGMAGWLYILYEIFAGEASKINASEGTNASKTAFNALKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTGACTGTTCCTCTACAAATAGTTGAATTTTATTTAATATTAGCCGCA---------GTT---GCAGCGGTAGCTGCT---GCTTTA------------------------------------TTCTGGCGC---CTTTTGATCGCCTCACTTGTAATGTTGATTGCAGGATACTTGGGTGAA---------GTA------------------GGT------GGA---------------------------------CAG------------------------------------------------------------------GATGGG---------TCCGGCCTTTGGATCTAC---TTTATCATTGGAATGGCAGGATGGTTGTATATCCTGTACGAAATT---------------TTT------GCT---GGCGAAGCGAGCAAAATTAATGCAAGC------GAA---GGCACCAACGCCTCG---AAA---ACT---GCA---TTC---AAC---GCTCTA---AAATGGATTGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---V-AAVAA-AL------------FWR-LLIASLVMLIAGYLGE---V------G--G-----------Q----------------------DG---SGLWIY-FIIGMAGWLYILYEI-----F--A-GEASKINAS--E-GTNAS-K-T-A-F-N-AL-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928145 [unk-Proteo2-b] PRGD_OTU026_4f74593bf90f19a4a6168277a1b673db gb|KJ928145| PRGD_OTU026_4f74593bf90f19a4a6168277a1b673db, putative proteorhodopsin gene, partial cds. PRGD_OTU026_4f74593bf90f19a4a6168277a1b673db, putative proteorhodopsin gene, partial cds. KJ928145 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTATTAACCGTTCCTCTGCAGATAGTTGAATTTTACTTAATATTAGCCGCTGTTGCAGCAGTGGCTGCTGCTTTGTTCTGGCGCCTTTTAATTGCTTCACTTGTGATGTTAATTGCAGGATACTTGGGTGAAGTAGGTGGACAAGATGGATCCGGCCTTTGGATCTACTTCATCATTGGAATGGCAGGATGGTTGTATATTCTGTACGAAATCTTTGCTGGCGAAGCGAGCAAAATTAATGCAAGCGAAGGCACCAACGCCTCAAAAACTGCATTTAACGGCCTAAAATGGATTGTAACAGTT LLTVPLQIVEFYLILAAVAAVAAALFWRLLIASLVMLIAGYLGEVGGQDGSGLWIYFIIGMAGWLYILYEIFAGEASKINASEGTNASKTAFNGLKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACCGTTCCTCTGCAGATAGTTGAATTTTACTTAATATTAGCCGCT---------GTT---GCAGCAGTGGCTGCT---GCTTTG------------------------------------TTCTGGCGC---CTTTTAATTGCTTCACTTGTGATGTTAATTGCAGGATACTTGGGTGAA---------GTA------------------GGT------GGA---------------------------------CAA------------------------------------------------------------------GATGGA---------TCCGGCCTTTGGATCTAC---TTCATCATTGGAATGGCAGGATGGTTGTATATTCTGTACGAAATC---------------TTT------GCT---GGCGAAGCGAGCAAAATTAATGCAAGC------GAA---GGCACCAACGCCTCA---AAA---ACT---GCA---TTT---AAC---GGCCTA---AAATGGATTGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---V-AAVAA-AL------------FWR-LLIASLVMLIAGYLGE---V------G--G-----------Q----------------------DG---SGLWIY-FIIGMAGWLYILYEI-----F--A-GEASKINAS--E-GTNAS-K-T-A-F-N-GL-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ929845 [unk-Proteo2-b] PRGD_OTU296_otuREP_e53facba9aa336046d54f2ec6710d6d6 gb|KJ929845| PRGD_OTU296_otuREP_e53facba9aa336046d54f2ec6710d6d6, putative proteorhodopsin gene, partial cds. PRGD_OTU296_otuREP_e53facba9aa336046d54f2ec6710d6d6, putative proteorhodopsin gene, partial cds. KJ929845 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-14.48, 113.45) CTCTTAACTGTCCCTCTTCAAATCATTGAATTTTACCTAATACTTGCAGCTATTGCTGCTGTTGCATCTTCAGTTTTTTGGAGATTATTAATCGCATCAGTTGTAATGTTGGTCGCTGGTTATCTTGGTGAAGTTGGTGGTGCTGATTCTAGCATGCTATGGCCATATTTCATTATTGGACTACTTGCATGGTTTTACATCATCTTTGAGATATTTGCTGGTGAGGCAAGTAAAATTAATGCCAGTCATGGAACTGCAGCCTCGCAAAGAGCATTTAGTGCCCTTCGTTTGATTGTAACATTC LLTVPLQIIEFYLILAAIAAVASSVFWRLLIASVVMLVAGYLGEVGGADSSMLWPYFIIGLLAWFYIIFEIFAGEASKINASHGTAASQRAFSALRLIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACTGTCCCTCTTCAAATCATTGAATTTTACCTAATACTTGCAGCT---------ATT---GCTGCTGTTGCATCT---TCAGTT------------------------------------TTTTGGAGA---TTATTAATCGCATCAGTTGTAATGTTGGTCGCTGGTTATCTTGGTGAA---------GTT------------------GGT------GGT---------------------------------GCT------------------------------------------------------------------GATTCT---------AGCATGCTATGGCCATAT---TTCATTATTGGACTACTTGCATGGTTTTACATCATCTTTGAGATA---------------TTT------GCT---GGTGAGGCAAGTAAAATTAATGCCAGT------CAT---GGAACTGCAGCCTCG---CAA---AGA---GCA---TTT---AGT---GCCCTT---CGTTTGATTGTAACATTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AAVAS-SV------------FWR-LLIASVVMLVAGYLGE---V------G--G-----------A----------------------DS---SMLWPY-FIIGLLAWFYIIFEI-----F--A-GEASKINAS--H-GTAAS-Q-R-A-F-S-AL-RLIVTF-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928762 [unk-Proteo2-b] PRGD_OTU051b_otuREP_a8b1e2699404cf33c5f883c72941c7ef gb|KJ928762| PRGD_OTU051b_otuREP_a8b1e2699404cf33c5f883c72941c7ef, putative proteorhodopsin gene, partial cds. PRGD_OTU051b_otuREP_a8b1e2699404cf33c5f883c72941c7ef, putative proteorhodopsin gene, partial cds. KJ928762 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTGTTAACCGTACCACTTCAAATTGTTGAATTCTACTTAATACTAGCAGCTATTGCTGTGGTTGCAGCGTCACTATTCTGGCGTCTGCTCATCGCATCAGTTGTAATGCTAGTTGCCGGTTATCTCGGTGAAGTAGGTGCAATGAATGTCTGGCTTGCGTTCATCATCGGAATGGCAGGTTGGATCTACATCATTTACGAAATATTTGCTGGTGAAGCAAGTAAAATTAGTGCAAGTGATGGTACCCCAGCATCTCAACGAGCATTTAATGCTCTGAGAATCATAGTAACAGTT LLTVPLQIVEFYLILAAIAVVAASLFWRLLIASVVMLVAGYLGEVGAMNVWLAFIIGMAGWIYIIYEIFAGEASKISASDGTPASQRAFNALRIIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACCGTACCACTTCAAATTGTTGAATTCTACTTAATACTAGCAGCT---------ATT---GCTGTGGTTGCAGCG---TCACTA------------------------------------TTCTGGCGT---CTGCTCATCGCATCAGTTGTAATGCTAGTTGCCGGTTATCTCGGTGAA---------GTA------------------GGT------GCA---------------------------------ATG------------------------------------------------------------------AATGTC------------------TGGCTTGCG---TTCATCATCGGAATGGCAGGTTGGATCTACATCATTTACGAAATA---------------TTT------GCT---GGTGAAGCAAGTAAAATTAGTGCAAGT------GAT---GGTACCCCAGCATCT---CAA---CGA---GCA---TTT---AAT---GCTCTG---AGAATCATAGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVAA-SL------------FWR-LLIASVVMLVAGYLGE---V------G--A-----------M----------------------NV------WLA-FIIGMAGWIYIIYEI-----F--A-GEASKISAS--D-GTPAS-Q-R-A-F-N-AL-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928769 [unk-Proteo2-b] PRGD_OTU051b_af3e0a10cd677c6eb1273d57a2f65908 gb|KJ928769| PRGD_OTU051b_af3e0a10cd677c6eb1273d57a2f65908, putative proteorhodopsin gene, partial cds. PRGD_OTU051b_af3e0a10cd677c6eb1273d57a2f65908, putative proteorhodopsin gene, partial cds. KJ928769 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683) CTGTTAACCGTACCACTTCAAATTGTTGAATTCTACTTAATACTAGCAGCTATTGCTGTGGTTGCAGCGTCACTATTCTGGCGTCTGCTCGTCGCATCAGTTGTAATGCTAGTTGCCGGTTATCTCGGTGAAGTAGACGCAATAAATGTCTGGCTTGCATTCATCATCGGAATGGCAGGTTGGATCTACATCATTTACGAAATATTTGCTGGTGAAGCAAGTAAAATTAGTGCAAGTGATGGTACCCCAGCATCTCAACGAGCATTTAATGCTCTGAGAATCATAGTAACAGTT LLTVPLQIVEFYLILAAIAVVAASLFWRLLVASVVMLVAGYLGEVDAINVWLAFIIGMAGWIYIIYEIFAGEASKISASDGTPASQRAFNALRIIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACCGTACCACTTCAAATTGTTGAATTCTACTTAATACTAGCAGCT---------ATT---GCTGTGGTTGCAGCG---TCACTA------------------------------------TTCTGGCGT---CTGCTCGTCGCATCAGTTGTAATGCTAGTTGCCGGTTATCTCGGTGAA---------GTA------------------GAC------GCA---------------------------------ATA------------------------------------------------------------------AATGTC------------------TGGCTTGCA---TTCATCATCGGAATGGCAGGTTGGATCTACATCATTTACGAAATA---------------TTT------GCT---GGTGAAGCAAGTAAAATTAGTGCAAGT------GAT---GGTACCCCAGCATCT---CAA---CGA---GCA---TTT---AAT---GCTCTG---AGAATCATAGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVAA-SL------------FWR-LLVASVVMLVAGYLGE---V------D--A-----------I----------------------NV------WLA-FIIGMAGWIYIIYEI-----F--A-GEASKISAS--D-GTPAS-Q-R-A-F-N-AL-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928767 [unk-Proteo2-b] PRGD_OTU051b_9369bbd4a3ca608de6e6e6716aae1e5f gb|KJ928767| PRGD_OTU051b_9369bbd4a3ca608de6e6e6716aae1e5f, putative proteorhodopsin gene, partial cds. PRGD_OTU051b_9369bbd4a3ca608de6e6e6716aae1e5f, putative proteorhodopsin gene, partial cds. KJ928767 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTGTTAACCGTACCACTTCAAATTGTTGAATTCTACTTAATACTAGCAGCTATTGCTGTGGTTGCAGCGTCACTATTCTGGCGCCTGCTCATCGCATCAGTTATAATGCTAGTTGCCGGTTATCTCGGTGAAGTAGGTGCAATGAATGTCTGGCTTGCTTTCATCATCGGAATGGCAGGTTGGATCTACATCATTTACGAAATATTTGCTGGTGAAGCAAGTAAAATTAGTGCAAGTGATGGTACCCCAGCATCTCAACGAGCATTTAATGCTTTGAGAATCATAGTAACAGTT LLTVPLQIVEFYLILAAIAVVAASLFWRLLIASVIMLVAGYLGEVGAMNVWLAFIIGMAGWIYIIYEIFAGEASKISASDGTPASQRAFNALRIIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACCGTACCACTTCAAATTGTTGAATTCTACTTAATACTAGCAGCT---------ATT---GCTGTGGTTGCAGCG---TCACTA------------------------------------TTCTGGCGC---CTGCTCATCGCATCAGTTATAATGCTAGTTGCCGGTTATCTCGGTGAA---------GTA------------------GGT------GCA---------------------------------ATG------------------------------------------------------------------AATGTC------------------TGGCTTGCT---TTCATCATCGGAATGGCAGGTTGGATCTACATCATTTACGAAATA---------------TTT------GCT---GGTGAAGCAAGTAAAATTAGTGCAAGT------GAT---GGTACCCCAGCATCT---CAA---CGA---GCA---TTT---AAT---GCTTTG---AGAATCATAGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVAA-SL------------FWR-LLIASVIMLVAGYLGE---V------G--A-----------M----------------------NV------WLA-FIIGMAGWIYIIYEI-----F--A-GEASKISAS--D-GTPAS-Q-R-A-F-N-AL-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928771 [unk-Proteo2-b] PRGD_OTU051b_f1933a797302e658070acdd1477ad877 gb|KJ928771| PRGD_OTU051b_f1933a797302e658070acdd1477ad877, putative proteorhodopsin gene, partial cds. PRGD_OTU051b_f1933a797302e658070acdd1477ad877, putative proteorhodopsin gene, partial cds. KJ928771 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTGTTAACCGTACCACTTCAAATTGTTGAATTCTACTTAATACTAGCAGCTATTGCTGTGGTCGCAGCGTCACTATTCTGGCGCCTGCTCATCGCATCAGTTGTAATGCTAGTTGCCGGTTATCTCGGTGAAGTAGGTGCAATGAATGTCTGGCTTGCTTTCATCATCGGAATGGCAGGTTGGATCTACATCATTTACGAAATATTTGCTGGTGAAGCAAGTAAAATTAGTGCAAGTGATGGTACCCCAGCATCTCAACGAGCATTTAATGCTTTGAGAATCATAGTAACAGTT LLTVPLQIVEFYLILAAIAVVAASLFWRLLIASVVMLVAGYLGEVGAMNVWLAFIIGMAGWIYIIYEIFAGEASKISASDGTPASQRAFNALRIIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACCGTACCACTTCAAATTGTTGAATTCTACTTAATACTAGCAGCT---------ATT---GCTGTGGTCGCAGCG---TCACTA------------------------------------TTCTGGCGC---CTGCTCATCGCATCAGTTGTAATGCTAGTTGCCGGTTATCTCGGTGAA---------GTA------------------GGT------GCA---------------------------------ATG------------------------------------------------------------------AATGTC------------------TGGCTTGCT---TTCATCATCGGAATGGCAGGTTGGATCTACATCATTTACGAAATA---------------TTT------GCT---GGTGAAGCAAGTAAAATTAGTGCAAGT------GAT---GGTACCCCAGCATCT---CAA---CGA---GCA---TTT---AAT---GCTTTG---AGAATCATAGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVAA-SL------------FWR-LLIASVVMLVAGYLGE---V------G--A-----------M----------------------NV------WLA-FIIGMAGWIYIIYEI-----F--A-GEASKISAS--D-GTPAS-Q-R-A-F-N-AL-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928765 [unk-Proteo2-b] PRGD_OTU051b_5c6686f596c68676e9907f64b6aa663d gb|KJ928765| PRGD_OTU051b_5c6686f596c68676e9907f64b6aa663d, putative proteorhodopsin gene, partial cds. PRGD_OTU051b_5c6686f596c68676e9907f64b6aa663d, putative proteorhodopsin gene, partial cds. KJ928765 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTGTTAACCGTACCACTTCAAATTGTTGAATTCTACTTAATACTAGCAGCTATTGCAGTGGTTGCAGCGTCACTATTCTGGCGTCTGCTCATCGCATCAGTTGTAATGCTAGTTGCCGGTTATCTCGGTGAAGTAGGTGCAATGAATGTCTGGCTTGCGTTCATTATCGGAATGGCAGGTTGGATCTACATCATTTACGAAATATTTGCTGGTGAAGCAAGTAAAATTAGTGCAAGTGATGGTACCCCAGCATCCCAACGAGCATTTAATGCTCTGAGAATCATTGTAACAGTT LLTVPLQIVEFYLILAAIAVVAASLFWRLLIASVVMLVAGYLGEVGAMNVWLAFIIGMAGWIYIIYEIFAGEASKISASDGTPASQRAFNALRIIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACCGTACCACTTCAAATTGTTGAATTCTACTTAATACTAGCAGCT---------ATT---GCAGTGGTTGCAGCG---TCACTA------------------------------------TTCTGGCGT---CTGCTCATCGCATCAGTTGTAATGCTAGTTGCCGGTTATCTCGGTGAA---------GTA------------------GGT------GCA---------------------------------ATG------------------------------------------------------------------AATGTC------------------TGGCTTGCG---TTCATTATCGGAATGGCAGGTTGGATCTACATCATTTACGAAATA---------------TTT------GCT---GGTGAAGCAAGTAAAATTAGTGCAAGT------GAT---GGTACCCCAGCATCC---CAA---CGA---GCA---TTT---AAT---GCTCTG---AGAATCATTGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVAA-SL------------FWR-LLIASVVMLVAGYLGE---V------G--A-----------M----------------------NV------WLA-FIIGMAGWIYIIYEI-----F--A-GEASKISAS--D-GTPAS-Q-R-A-F-N-AL-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928770 [unk-Proteo2-b] PRGD_OTU051b_df6ffdf1b8c4b2340e660f1fc6ce419e gb|KJ928770| PRGD_OTU051b_df6ffdf1b8c4b2340e660f1fc6ce419e, putative proteorhodopsin gene, partial cds. PRGD_OTU051b_df6ffdf1b8c4b2340e660f1fc6ce419e, putative proteorhodopsin gene, partial cds. KJ928770 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-33.28, 45.35) CTGTTAACCGTACCACTTCAAATTGTTGAATTCTACTTAATACTAGCAGCTATTGCTGTGGTTGCAGCGTCACTATTCTGGCGTCTGCTCATCGCATCAGTTGTAATGCTAGTTGCCGGTTATCTTGGTGAAGTAGGTGCAATGAATGTCTGGCTTGCGTTCATTATCGGAATGGCAGGTTGGATCTACATCATTTACGAAATATTTGCTGGTGAAGCAAGTAAAATTAGTGCAAGTGATGGTACCCCAGCATCCCAACGAGCATTTAATGCTTTAAGAATCATTGTAACTGTT LLTVPLQIVEFYLILAAIAVVAASLFWRLLIASVVMLVAGYLGEVGAMNVWLAFIIGMAGWIYIIYEIFAGEASKISASDGTPASQRAFNALRIIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACCGTACCACTTCAAATTGTTGAATTCTACTTAATACTAGCAGCT---------ATT---GCTGTGGTTGCAGCG---TCACTA------------------------------------TTCTGGCGT---CTGCTCATCGCATCAGTTGTAATGCTAGTTGCCGGTTATCTTGGTGAA---------GTA------------------GGT------GCA---------------------------------ATG------------------------------------------------------------------AATGTC------------------TGGCTTGCG---TTCATTATCGGAATGGCAGGTTGGATCTACATCATTTACGAAATA---------------TTT------GCT---GGTGAAGCAAGTAAAATTAGTGCAAGT------GAT---GGTACCCCAGCATCC---CAA---CGA---GCA---TTT---AAT---GCTTTA---AGAATCATTGTAACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVAA-SL------------FWR-LLIASVVMLVAGYLGE---V------G--A-----------M----------------------NV------WLA-FIIGMAGWIYIIYEI-----F--A-GEASKISAS--D-GTPAS-Q-R-A-F-N-AL-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928768 [unk-Proteo2-b] PRGD_OTU051b_9bdb63352c39c8bdb72b2952f8bbddc0 gb|KJ928768| PRGD_OTU051b_9bdb63352c39c8bdb72b2952f8bbddc0, putative proteorhodopsin gene, partial cds. PRGD_OTU051b_9bdb63352c39c8bdb72b2952f8bbddc0, putative proteorhodopsin gene, partial cds. KJ928768 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTGTTAACTGTACCACTTCAAATTGTTGAATTCTACTTAATACTAGCCGCTATTGCTGTGGTAGCAGCGTCACTATTCTGGCGTCTGCTAATCGCATCAGTTGTAATGCTAGTTGCCGGTTATCTCGGTGAAGTAGGTGCAATGAATGTCTGGCTTGCTTTCATTATTGGGATGGCAGGTTGGATCTACATCATTTACGAAATATTTGCTGGTGAAGCAAGTAAAATTAGTGCAAGTGATGGTACCCCAGCTTCTCAACGAGCATTTAATGCTTTGAGAATCATTGTAACAGTT LLTVPLQIVEFYLILAAIAVVAASLFWRLLIASVVMLVAGYLGEVGAMNVWLAFIIGMAGWIYIIYEIFAGEASKISASDGTPASQRAFNALRIIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACTGTACCACTTCAAATTGTTGAATTCTACTTAATACTAGCCGCT---------ATT---GCTGTGGTAGCAGCG---TCACTA------------------------------------TTCTGGCGT---CTGCTAATCGCATCAGTTGTAATGCTAGTTGCCGGTTATCTCGGTGAA---------GTA------------------GGT------GCA---------------------------------ATG------------------------------------------------------------------AATGTC------------------TGGCTTGCT---TTCATTATTGGGATGGCAGGTTGGATCTACATCATTTACGAAATA---------------TTT------GCT---GGTGAAGCAAGTAAAATTAGTGCAAGT------GAT---GGTACCCCAGCTTCT---CAA---CGA---GCA---TTT---AAT---GCTTTG---AGAATCATTGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVAA-SL------------FWR-LLIASVVMLVAGYLGE---V------G--A-----------M----------------------NV------WLA-FIIGMAGWIYIIYEI-----F--A-GEASKISAS--D-GTPAS-Q-R-A-F-N-AL-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928764 [unk-Proteo2-b] PRGD_OTU051b_3af806c53f9fcaff5e0620ae1fac7e32 gb|KJ928764| PRGD_OTU051b_3af806c53f9fcaff5e0620ae1fac7e32, putative proteorhodopsin gene, partial cds. PRGD_OTU051b_3af806c53f9fcaff5e0620ae1fac7e32, putative proteorhodopsin gene, partial cds. KJ928764 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGTTAACCGTACCACTTCAAATTGTTGAATTCTACTTAATACTAGCAGCTATTGCTGTGGTTGCAGCGTCACTATTCTGGCGTCTGCTTATCGCATCAGTTGTAATGCTAGTTGCCGGTTATCTTGGTGAAGTAGGTGCAATGAATGTCTGGCTTGCGTTCATCATTGGAATGGCAGGTTGGATTTACATCATTTACGAAATATTTGCTGGTGAAGCAAGTAAAATTAGTGCAAGTGATGGTACCCCAGCTTCTCAACGAGCATTTAATGCTTTGAGAATCATTGTAACAGTT LLTVPLQIVEFYLILAAIAVVAASLFWRLLIASVVMLVAGYLGEVGAMNVWLAFIIGMAGWIYIIYEIFAGEASKISASDGTPASQRAFNALRIIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACCGTACCACTTCAAATTGTTGAATTCTACTTAATACTAGCAGCT---------ATT---GCTGTGGTTGCAGCG---TCACTA------------------------------------TTCTGGCGT---CTGCTTATCGCATCAGTTGTAATGCTAGTTGCCGGTTATCTTGGTGAA---------GTA------------------GGT------GCA---------------------------------ATG------------------------------------------------------------------AATGTC------------------TGGCTTGCG---TTCATCATTGGAATGGCAGGTTGGATTTACATCATTTACGAAATA---------------TTT------GCT---GGTGAAGCAAGTAAAATTAGTGCAAGT------GAT---GGTACCCCAGCTTCT---CAA---CGA---GCA---TTT---AAT---GCTTTG---AGAATCATTGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVAA-SL------------FWR-LLIASVVMLVAGYLGE---V------G--A-----------M----------------------NV------WLA-FIIGMAGWIYIIYEI-----F--A-GEASKISAS--D-GTPAS-Q-R-A-F-N-AL-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928763 [unk-Proteo2-b] PRGD_OTU051b_0a5cea2ea50288b7b82278f604100098 gb|KJ928763| PRGD_OTU051b_0a5cea2ea50288b7b82278f604100098, putative proteorhodopsin gene, partial cds. PRGD_OTU051b_0a5cea2ea50288b7b82278f604100098, putative proteorhodopsin gene, partial cds. KJ928763 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTTTAACCGTACCACTTCAAATTGTTGAATTCTACTTAATACTAGCAGCTATAGCTGTGGTTGCAGCGTCACTATTCTGGCGTCTGCTTATCGCATCAGTTGTAATGCTAGTTGCGGGTTATCTCGGTGAAGTAGGTGCAATGAATGTCTGGCTTGCTTTCATTATCGGAATGGCAGGTTGGATTTACATCATTTACGAAATATTTGCTGGTGAAGCAAGTAAAATTAGTGCAAGTGATGGTACCCCAGCTTCTCAACGAGCATTTAATGCTTTGAGAATCATCGTAACAGTT LLTVPLQIVEFYLILAAIAVVAASLFWRLLIASVVMLVAGYLGEVGAMNVWLAFIIGMAGWIYIIYEIFAGEASKISASDGTPASQRAFNALRIIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTAACCGTACCACTTCAAATTGTTGAATTCTACTTAATACTAGCAGCT---------ATA---GCTGTGGTTGCAGCG---TCACTA------------------------------------TTCTGGCGT---CTGCTTATCGCATCAGTTGTAATGCTAGTTGCGGGTTATCTCGGTGAA---------GTA------------------GGT------GCA---------------------------------ATG------------------------------------------------------------------AATGTC------------------TGGCTTGCT---TTCATTATCGGAATGGCAGGTTGGATTTACATCATTTACGAAATA---------------TTT------GCT---GGTGAAGCAAGTAAAATTAGTGCAAGT------GAT---GGTACCCCAGCTTCT---CAA---CGA---GCA---TTT---AAT---GCTTTG---AGAATCATCGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVAA-SL------------FWR-LLIASVVMLVAGYLGE---V------G--A-----------M----------------------NV------WLA-FIIGMAGWIYIIYEI-----F--A-GEASKISAS--D-GTPAS-Q-R-A-F-N-AL-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-b]_KJ928766 [unk-Proteo2-b] PRGD_OTU051b_78c75c229fee2e051defb9f2e160bf50 gb|KJ928766| PRGD_OTU051b_78c75c229fee2e051defb9f2e160bf50, putative proteorhodopsin gene, partial cds. PRGD_OTU051b_78c75c229fee2e051defb9f2e160bf50, putative proteorhodopsin gene, partial cds. KJ928766 [[proteorhodopsin/Proteobacterial-like cluster 2/B subcluster]] proteorhodopsin Proteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTTTAACCGTACCACTTCAAATTGTTGAATTCTACTTAATACTAGCAGCTATTGCTGTTGTAGCAGCCTCACTATTCTGGCGTCTACTAATTGCATCAGTTGTAATGCTAGTTGCCGGGTATCTCGGTGAAGTAGGAGCAATGAATGTATGGCTTGCTTTCATTATCGGGATGGCAGGTTGGATTTACATCATTTACGAAATATTTGCTGGTGAAGCAAGTAAAATTAGTGCAAGTGATGGTACCCCAGCTTCTCAAAGAGCATTTAACGCTTTGAGGATCATTGTTACAGTT LLTVPLQIVEFYLILAAIAVVAASLFWRLLIASVVMLVAGYLGEVGAMNVWLAFIIGMAGWIYIIYEIFAGEASKISASDGTPASQRAFNALRIIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTAACCGTACCACTTCAAATTGTTGAATTCTACTTAATACTAGCAGCT---------ATT---GCTGTTGTAGCAGCC---TCACTA------------------------------------TTCTGGCGT---CTACTAATTGCATCAGTTGTAATGCTAGTTGCCGGGTATCTCGGTGAA---------GTA------------------GGA------GCA---------------------------------ATG------------------------------------------------------------------AATGTA------------------TGGCTTGCT---TTCATTATCGGGATGGCAGGTTGGATTTACATCATTTACGAAATA---------------TTT------GCT---GGTGAAGCAAGTAAAATTAGTGCAAGT------GAT---GGTACCCCAGCTTCT---CAA---AGA---GCA---TTT---AAC---GCTTTG---AGGATCATTGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVAA-SL------------FWR-LLIASVVMLVAGYLGE---V------G--A-----------M----------------------NV------WLA-FIIGMAGWIYIIYEI-----F--A-GEASKISAS--D-GTPAS-Q-R-A-F-N-AL-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927794 [unk-Proteo2-a] PRGD_OTU017_34472c994a93cb111e01a57708e7b4fb gb|KJ927794| PRGD_OTU017_34472c994a93cb111e01a57708e7b4fb, putative proteorhodopsin gene, partial cds. PRGD_OTU017_34472c994a93cb111e01a57708e7b4fb, putative proteorhodopsin gene, partial cds. KJ927794 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCTTAACCGTGCCACTCCAAATAATCGAATTCTTCCTGATCCTGTCAGCAATCGCAGTGGTCAGTGCGTCATTATTCTGGCGCTTGCTGATTGCATCAGTGGTCATGTTGGTCGCTGGATATCTCGGCGAGGTTGAACAAGGCGGAATGCTCTGGCCGATGTTCATTCTGGGCCTACTTGCTTGGGTTTATATCATCTACGAAGTCTTCGCGGGTGAGGCGAGTAAAATCAATGCTAACTCCGGAACAGTGGCGTCGAAGAAAGCGTTTCATGCGCTTCGACTCATTGTAACCGTC LLTVPLQIIEFFLILSAIAVVSASLFWRLLIASVVMLVAGYLGEVEQGGMLWPMFILGLLAWVYIIYEVFAGEASKINANSGTVASKKAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACCGTGCCACTCCAAATAATCGAATTCTTCCTGATCCTGTCAGCA---------ATC---GCAGTGGTCAGTGCG---TCATTA------------------------------------TTCTGGCGC---TTGCTGATTGCATCAGTGGTCATGTTGGTCGCTGGATATCTCGGCGAG---------GTT------------------GAA------CAA---------------------------------GGC---------------------------------------------------------------------------------GGAATGCTCTGGCCGATG---TTCATTCTGGGCCTACTTGCTTGGGTTTATATCATCTACGAAGTC---------------TTC------GCG---GGTGAGGCGAGTAAAATCAATGCTAAC------TCC---GGAACAGTGGCGTCG---AAG---AAA---GCG---TTT---CAT---GCGCTT---CGACTCATTGTAACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVSA-SL------------FWR-LLIASVVMLVAGYLGE---V------E--Q-----------G---------------------------GMLWPM-FILGLLAWVYIIYEV-----F--A-GEASKINAN--S-GTVAS-K-K-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927826 [unk-Proteo2-a] PRGD_OTU017_b3fed1974b22adb8449ed4d6915a02ba gb|KJ927826| PRGD_OTU017_b3fed1974b22adb8449ed4d6915a02ba, putative proteorhodopsin gene, partial cds. PRGD_OTU017_b3fed1974b22adb8449ed4d6915a02ba, putative proteorhodopsin gene, partial cds. KJ927826 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTCTTAACCGTGCCACTCCAAATCATCGAATTCTTCCTGATCCTGTCAGCAATCGCAGTGGTAGGTGCGTCATTATTCTGGCGCTTGCTGATTGCATCAGTGGTCATGTTGGTCGCTGGATATCTCGGCGAGGTTGAACAAGGCGGCATGCTCTGGCCGATGTTCATTCTGGGCCTACTTGCTTGGTTTTATATCATCTACGAAGTCTTCGCGGGTGAAGCGAGTAAAATCAATGCGAACTCCGGAACGGTGGCGTCAAAGAAAGCGTTTCATGCGCTTCGGCTCATTGTAACCGTC LLTVPLQIIEFFLILSAIAVVGASLFWRLLIASVVMLVAGYLGEVEQGGMLWPMFILGLLAWFYIIYEVFAGEASKINANSGTVASKKAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACCGTGCCACTCCAAATCATCGAATTCTTCCTGATCCTGTCAGCA---------ATC---GCAGTGGTAGGTGCG---TCATTA------------------------------------TTCTGGCGC---TTGCTGATTGCATCAGTGGTCATGTTGGTCGCTGGATATCTCGGCGAG---------GTT------------------GAA------CAA---------------------------------GGC---------------------------------------------------------------------------------GGCATGCTCTGGCCGATG---TTCATTCTGGGCCTACTTGCTTGGTTTTATATCATCTACGAAGTC---------------TTC------GCG---GGTGAAGCGAGTAAAATCAATGCGAAC------TCC---GGAACGGTGGCGTCA---AAG---AAA---GCG---TTT---CAT---GCGCTT---CGGCTCATTGTAACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVGA-SL------------FWR-LLIASVVMLVAGYLGE---V------E--Q-----------G---------------------------GMLWPM-FILGLLAWFYIIYEV-----F--A-GEASKINAN--S-GTVAS-K-K-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927797 [unk-Proteo2-a] PRGD_OTU017_3a9b594b650fd5604c6c06f6a3d0ce84 gb|KJ927797| PRGD_OTU017_3a9b594b650fd5604c6c06f6a3d0ce84, putative proteorhodopsin gene, partial cds. PRGD_OTU017_3a9b594b650fd5604c6c06f6a3d0ce84, putative proteorhodopsin gene, partial cds. KJ927797 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCTTAACCGTGCCACTCCAAATCATCGAATTCTTCCTGATCCTCTCAGCAATCGCAGTGGTCAGTGCGTCATTATTCTGGCGCTTGCTGATTGCATCAGTGGTCATGTTGGTCGCTGGATATCTCGGCGAGGTTGAACAAGGCGGCATGCTCTGGCCGATGTTCATCCTGGGCCTACTTGCTTGGGTTTATATCATCTACGAAGTCTTCGCGGGTGAAGCGAGTAAAATCAATGCGAACTCCGGAACAATGGCGTCAAAGAAAGCGTTTCATGCGCTTCGGCTCATTGTAACCGTC LLTVPLQIIEFFLILSAIAVVSASLFWRLLIASVVMLVAGYLGEVEQGGMLWPMFILGLLAWVYIIYEVFAGEASKINANSGTMASKKAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACCGTGCCACTCCAAATCATCGAATTCTTCCTGATCCTCTCAGCA---------ATC---GCAGTGGTCAGTGCG---TCATTA------------------------------------TTCTGGCGC---TTGCTGATTGCATCAGTGGTCATGTTGGTCGCTGGATATCTCGGCGAG---------GTT------------------GAA------CAA---------------------------------GGC---------------------------------------------------------------------------------GGCATGCTCTGGCCGATG---TTCATCCTGGGCCTACTTGCTTGGGTTTATATCATCTACGAAGTC---------------TTC------GCG---GGTGAAGCGAGTAAAATCAATGCGAAC------TCC---GGAACAATGGCGTCA---AAG---AAA---GCG---TTT---CAT---GCGCTT---CGGCTCATTGTAACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVSA-SL------------FWR-LLIASVVMLVAGYLGE---V------E--Q-----------G---------------------------GMLWPM-FILGLLAWVYIIYEV-----F--A-GEASKINAN--S-GTMAS-K-K-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927811 [unk-Proteo2-a] PRGD_OTU017_798af0de2532014b0429a19632e97fd4 gb|KJ927811| PRGD_OTU017_798af0de2532014b0429a19632e97fd4, putative proteorhodopsin gene, partial cds. PRGD_OTU017_798af0de2532014b0429a19632e97fd4, putative proteorhodopsin gene, partial cds. KJ927811 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCTTAACTGTGCCGCTCCAAATCATCGAATTCTTCCTGATCCTGTCAGCAATCGCAGTGGTCAGTGCGTCATTATTCTGGCGCTTGCTGATTGCATCAGTGGTCATGTTGGTCGCTGGATATCTCGGCGAGGTTGAACAAGGCGGCATGCTCTGGCCGATGTTCATCCTGGGCCTACTTGCTTGGGTTTATATCATCTACGAAGTCTTCGCGGGTGAAGCGAGTAAAATCAATGCGAACTCCGGAACAGTGGCGTCAAAGAAAGCGTTTCATGCGCTTCGGCTCATTGTAACCGTC LLTVPLQIIEFFLILSAIAVVSASLFWRLLIASVVMLVAGYLGEVEQGGMLWPMFILGLLAWVYIIYEVFAGEASKINANSGTVASKKAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACTGTGCCGCTCCAAATCATCGAATTCTTCCTGATCCTGTCAGCA---------ATC---GCAGTGGTCAGTGCG---TCATTA------------------------------------TTCTGGCGC---TTGCTGATTGCATCAGTGGTCATGTTGGTCGCTGGATATCTCGGCGAG---------GTT------------------GAA------CAA---------------------------------GGC---------------------------------------------------------------------------------GGCATGCTCTGGCCGATG---TTCATCCTGGGCCTACTTGCTTGGGTTTATATCATCTACGAAGTC---------------TTC------GCG---GGTGAAGCGAGTAAAATCAATGCGAAC------TCC---GGAACAGTGGCGTCA---AAG---AAA---GCG---TTT---CAT---GCGCTT---CGGCTCATTGTAACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVSA-SL------------FWR-LLIASVVMLVAGYLGE---V------E--Q-----------G---------------------------GMLWPM-FILGLLAWVYIIYEV-----F--A-GEASKINAN--S-GTVAS-K-K-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927795 [unk-Proteo2-a] PRGD_OTU017_378edd17ce2bbc06e690ef05c67d52ef gb|KJ927795| PRGD_OTU017_378edd17ce2bbc06e690ef05c67d52ef, putative proteorhodopsin gene, partial cds. PRGD_OTU017_378edd17ce2bbc06e690ef05c67d52ef, putative proteorhodopsin gene, partial cds. KJ927795 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTCTTAACTGTGCCCCTACAAATCATCGAATTCTTCCTAATCCTGTCAGCAATCGCTGTGGTCAGTGCGTCGTTATTCTGGCGCTTGCTGATTGCATCGGTAGTCATGCTGGTCGCTGGATATCTTGGCGAGGTTGAGCAAGGCGGCATGCTCTGGCCCATGTTCATCCTAGGCCTACTTGCTTGGGTTTATATTATCTACGAAGTCTTCGCGGGTGAAGCGAGTAAAATCAATGCAAGCTCCGGAACAGTGGCGTCAAAGAAAGCGTTTCATGCGCTTCGGCTCATTGTAACCGTA LLTVPLQIIEFFLILSAIAVVSASLFWRLLIASVVMLVAGYLGEVEQGGMLWPMFILGLLAWVYIIYEVFAGEASKINASSGTVASKKAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACTGTGCCCCTACAAATCATCGAATTCTTCCTAATCCTGTCAGCA---------ATC---GCTGTGGTCAGTGCG---TCGTTA------------------------------------TTCTGGCGC---TTGCTGATTGCATCGGTAGTCATGCTGGTCGCTGGATATCTTGGCGAG---------GTT------------------GAG------CAA---------------------------------GGC---------------------------------------------------------------------------------GGCATGCTCTGGCCCATG---TTCATCCTAGGCCTACTTGCTTGGGTTTATATTATCTACGAAGTC---------------TTC------GCG---GGTGAAGCGAGTAAAATCAATGCAAGC------TCC---GGAACAGTGGCGTCA---AAG---AAA---GCG---TTT---CAT---GCGCTT---CGGCTCATTGTAACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVSA-SL------------FWR-LLIASVVMLVAGYLGE---V------E--Q-----------G---------------------------GMLWPM-FILGLLAWVYIIYEV-----F--A-GEASKINAS--S-GTVAS-K-K-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927808 [unk-Proteo2-a] PRGD_OTU017_686ee1471df0bc445d6ea3c3f79326b5 gb|KJ927808| PRGD_OTU017_686ee1471df0bc445d6ea3c3f79326b5, putative proteorhodopsin gene, partial cds. PRGD_OTU017_686ee1471df0bc445d6ea3c3f79326b5, putative proteorhodopsin gene, partial cds. KJ927808 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCTTAACCGTGCCACTCCAAATCATCGAATTCTTCCTGATTCTGTCAGCAATCGCAGTGGTCAGTGCGTCATTATTCTGGCGCTTGCTGATTGCATCAGTGGTCATGTTGGTCGCTGGATATCTTGGCGAGGTTGAACAAGGCGGCATGCTTTGGCCGATGTTCATCCTGGGCCTACTCTCTTGGGTTTATATCATCTACGAAGTCTTCGCGGGTGAAGCGAGTAAAATCAATGCGAGCTCCGGAACAGTGGCGTCAAAGAAAGCGTTTCATGCGCTTCGGCTCATTGTAACCGTC LLTVPLQIIEFFLILSAIAVVSASLFWRLLIASVVMLVAGYLGEVEQGGMLWPMFILGLLSWVYIIYEVFAGEASKINASSGTVASKKAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACCGTGCCACTCCAAATCATCGAATTCTTCCTGATTCTGTCAGCA---------ATC---GCAGTGGTCAGTGCG---TCATTA------------------------------------TTCTGGCGC---TTGCTGATTGCATCAGTGGTCATGTTGGTCGCTGGATATCTTGGCGAG---------GTT------------------GAA------CAA---------------------------------GGC---------------------------------------------------------------------------------GGCATGCTTTGGCCGATG---TTCATCCTGGGCCTACTCTCTTGGGTTTATATCATCTACGAAGTC---------------TTC------GCG---GGTGAAGCGAGTAAAATCAATGCGAGC------TCC---GGAACAGTGGCGTCA---AAG---AAA---GCG---TTT---CAT---GCGCTT---CGGCTCATTGTAACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVSA-SL------------FWR-LLIASVVMLVAGYLGE---V------E--Q-----------G---------------------------GMLWPM-FILGLLSWVYIIYEV-----F--A-GEASKINAS--S-GTVAS-K-K-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927822 [unk-Proteo2-a] PRGD_OTU017_af89274b40fb9055919828c7abbdfe29 gb|KJ927822| PRGD_OTU017_af89274b40fb9055919828c7abbdfe29, putative proteorhodopsin gene, partial cds. PRGD_OTU017_af89274b40fb9055919828c7abbdfe29, putative proteorhodopsin gene, partial cds. KJ927822 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-33.28, 45.35) CTCTTAACCGTGCCACTCCAAATCATCGAATTCTTCCTGATCCTGTCAGCAATCGCAGTGGTCAGTGCGTCATTATTCTGGCGCTTGCTGATTGCTTCAGTGGTCATGTTGGTCGCTGGGTATCTTGGCGAGGTTGAACAAGGCGGCATGCTCTGGCCGATGTTCATCCTGGGCCTACTTGCTTGGGTTTATATCATCTACGAAGTCTTCGCGGGTGAAGCGAGTAAAATCAATGCGAACTCCGGAACAGTGGCGTCAAAGAAAGCGTTTCATGCGCTTCGGCTCATTGTTACGGTT LLTVPLQIIEFFLILSAIAVVSASLFWRLLIASVVMLVAGYLGEVEQGGMLWPMFILGLLAWVYIIYEVFAGEASKINANSGTVASKKAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACCGTGCCACTCCAAATCATCGAATTCTTCCTGATCCTGTCAGCA---------ATC---GCAGTGGTCAGTGCG---TCATTA------------------------------------TTCTGGCGC---TTGCTGATTGCTTCAGTGGTCATGTTGGTCGCTGGGTATCTTGGCGAG---------GTT------------------GAA------CAA---------------------------------GGC---------------------------------------------------------------------------------GGCATGCTCTGGCCGATG---TTCATCCTGGGCCTACTTGCTTGGGTTTATATCATCTACGAAGTC---------------TTC------GCG---GGTGAAGCGAGTAAAATCAATGCGAAC------TCC---GGAACAGTGGCGTCA---AAG---AAA---GCG---TTT---CAT---GCGCTT---CGGCTCATTGTTACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVSA-SL------------FWR-LLIASVVMLVAGYLGE---V------E--Q-----------G---------------------------GMLWPM-FILGLLAWVYIIYEV-----F--A-GEASKINAN--S-GTVAS-K-K-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927804 [unk-Proteo2-a] PRGD_OTU017_4cb080a671bdbe814071c5d3a94595aa gb|KJ927804| PRGD_OTU017_4cb080a671bdbe814071c5d3a94595aa, putative proteorhodopsin gene, partial cds. PRGD_OTU017_4cb080a671bdbe814071c5d3a94595aa, putative proteorhodopsin gene, partial cds. KJ927804 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCTTAACCGTGCCACTCCAAATCATCGAATTTTTCCTGATCCTGTCAGCTATCGCAGTGGTCAGTGCGTCATTGTTCTGGCGCTTGCTGATTGCATCAGTGGTCATGTTGGTCGCTGGATATCTCGGCGAGGTTGAACAAGGCGGCATGCTCTGGCCGATGTTCATCTTGGGCTTACTTGCTTGGGTTTATATCATCTACGAAGTATTCGCGGGTGAAGCGAGTAAGATCAATGCGAACTCCGGAACAGTGGCGTCAAAGAAGGCGTTTCATGCGCTTCGGCTCATTGTAACTGTC LLTVPLQIIEFFLILSAIAVVSASLFWRLLIASVVMLVAGYLGEVEQGGMLWPMFILGLLAWVYIIYEVFAGEASKINANSGTVASKKAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACCGTGCCACTCCAAATCATCGAATTTTTCCTGATCCTGTCAGCT---------ATC---GCAGTGGTCAGTGCG---TCATTG------------------------------------TTCTGGCGC---TTGCTGATTGCATCAGTGGTCATGTTGGTCGCTGGATATCTCGGCGAG---------GTT------------------GAA------CAA---------------------------------GGC---------------------------------------------------------------------------------GGCATGCTCTGGCCGATG---TTCATCTTGGGCTTACTTGCTTGGGTTTATATCATCTACGAAGTA---------------TTC------GCG---GGTGAAGCGAGTAAGATCAATGCGAAC------TCC---GGAACAGTGGCGTCA---AAG---AAG---GCG---TTT---CAT---GCGCTT---CGGCTCATTGTAACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVSA-SL------------FWR-LLIASVVMLVAGYLGE---V------E--Q-----------G---------------------------GMLWPM-FILGLLAWVYIIYEV-----F--A-GEASKINAN--S-GTVAS-K-K-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927823 [unk-Proteo2-a] PRGD_OTU017_b0464aa350eae3cbe62b3ff0bf03c92a gb|KJ927823| PRGD_OTU017_b0464aa350eae3cbe62b3ff0bf03c92a, putative proteorhodopsin gene, partial cds. PRGD_OTU017_b0464aa350eae3cbe62b3ff0bf03c92a, putative proteorhodopsin gene, partial cds. KJ927823 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (33.762, 29.175), Indian Ocean (-33.28, 45.35) CTCTTAACCGTGCCACTCCAAATCATCGAATTCTTCCTAATCCTGTCAGCAATCGCAGTGGTCAGTGCGTCATTATTCTGGCGCTTGCTGATTGCATCAGTGGTCATGTTGGTCGCTGGATATCTCGGCGAGGTCGAACAAGGCGGCATGCTCTGGCCGATGTTCATCTTGGGCTTACTTGCTTGGGTTTATATCATCTACGAAGTCTTCGCGGGTGAAGCGAGTAAAATCAATGCGAACTCCGGAACAGTGGCGTCAAAGAAAGCGTTTCATGCGCTTCGGCTCATTGTAACTGTC LLTVPLQIIEFFLILSAIAVVSASLFWRLLIASVVMLVAGYLGEVEQGGMLWPMFILGLLAWVYIIYEVFAGEASKINANSGTVASKKAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACCGTGCCACTCCAAATCATCGAATTCTTCCTAATCCTGTCAGCA---------ATC---GCAGTGGTCAGTGCG---TCATTA------------------------------------TTCTGGCGC---TTGCTGATTGCATCAGTGGTCATGTTGGTCGCTGGATATCTCGGCGAG---------GTC------------------GAA------CAA---------------------------------GGC---------------------------------------------------------------------------------GGCATGCTCTGGCCGATG---TTCATCTTGGGCTTACTTGCTTGGGTTTATATCATCTACGAAGTC---------------TTC------GCG---GGTGAAGCGAGTAAAATCAATGCGAAC------TCC---GGAACAGTGGCGTCA---AAG---AAA---GCG---TTT---CAT---GCGCTT---CGGCTCATTGTAACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVSA-SL------------FWR-LLIASVVMLVAGYLGE---V------E--Q-----------G---------------------------GMLWPM-FILGLLAWVYIIYEV-----F--A-GEASKINAN--S-GTVAS-K-K-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927801 [unk-Proteo2-a] PRGD_OTU017_481e6d7fca47a9c3d5e17c86ef67e684 gb|KJ927801| PRGD_OTU017_481e6d7fca47a9c3d5e17c86ef67e684, putative proteorhodopsin gene, partial cds. PRGD_OTU017_481e6d7fca47a9c3d5e17c86ef67e684, putative proteorhodopsin gene, partial cds. KJ927801 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCTTAACCGTGCCACTCCAAATCATCGAATTCTTCCTGATCCTGTCAGCAATCGCAGTGGTCAGTGCGTCATTATTCTGGCGCTTACTGATTGCATCAGTGGTCATGTTGGTCGCTGGATACCTCGGCGAGGTTGAACAAGGCGGCATGCTTTGGCCGATGTTCATCCTGGGCCTACTTGCTTGGGTTTATATCATCTACGAAGTCTTCGCGGGTGAAGCGAGCAAGATCAACGCAAACTCCGGAACGGTGGCGTCAAAGAAAGCGTTTCATGCGCTTCGGCTCATCGTAACGGTG LLTVPLQIIEFFLILSAIAVVSASLFWRLLIASVVMLVAGYLGEVEQGGMLWPMFILGLLAWVYIIYEVFAGEASKINANSGTVASKKAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACCGTGCCACTCCAAATCATCGAATTCTTCCTGATCCTGTCAGCA---------ATC---GCAGTGGTCAGTGCG---TCATTA------------------------------------TTCTGGCGC---TTACTGATTGCATCAGTGGTCATGTTGGTCGCTGGATACCTCGGCGAG---------GTT------------------GAA------CAA---------------------------------GGC---------------------------------------------------------------------------------GGCATGCTTTGGCCGATG---TTCATCCTGGGCCTACTTGCTTGGGTTTATATCATCTACGAAGTC---------------TTC------GCG---GGTGAAGCGAGCAAGATCAACGCAAAC------TCC---GGAACGGTGGCGTCA---AAG---AAA---GCG---TTT---CAT---GCGCTT---CGGCTCATCGTAACGGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVSA-SL------------FWR-LLIASVVMLVAGYLGE---V------E--Q-----------G---------------------------GMLWPM-FILGLLAWVYIIYEV-----F--A-GEASKINAN--S-GTVAS-K-K-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927821 [unk-Proteo2-a] PRGD_OTU017_a2754818a7cf146cd5ed891bc865ddb8 gb|KJ927821| PRGD_OTU017_a2754818a7cf146cd5ed891bc865ddb8, putative proteorhodopsin gene, partial cds. PRGD_OTU017_a2754818a7cf146cd5ed891bc865ddb8, putative proteorhodopsin gene, partial cds. KJ927821 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTCTTAACTGTGCCCCTGCAAATCATCGAATTCTTCCTGATCTTGTCAGCAATCGCTGTGGTCAGTGCGTCATTATTCTGGCGCTTGCTGATTGCATCGGTAGTCATGTTGGTCGCTGGATATCTCGGCGAGGTCGAACAAGGCGGCATGCTCTGGCCAATGTTCATCCTGGGCCTACTTGCTTGGATTTATATCATCTACGAAGTCTTCGCGGGTGAAGCGAGTAAAATCAATGCGAGCTCCGGAACAGTGGCATCAAAGAAAGCGTTTCATGCGCTTCGACTAATTGTAACTGTA LLTVPLQIIEFFLILSAIAVVSASLFWRLLIASVVMLVAGYLGEVEQGGMLWPMFILGLLAWIYIIYEVFAGEASKINASSGTVASKKAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACTGTGCCCCTGCAAATCATCGAATTCTTCCTGATCTTGTCAGCA---------ATC---GCTGTGGTCAGTGCG---TCATTA------------------------------------TTCTGGCGC---TTGCTGATTGCATCGGTAGTCATGTTGGTCGCTGGATATCTCGGCGAG---------GTC------------------GAA------CAA---------------------------------GGC---------------------------------------------------------------------------------GGCATGCTCTGGCCAATG---TTCATCCTGGGCCTACTTGCTTGGATTTATATCATCTACGAAGTC---------------TTC------GCG---GGTGAAGCGAGTAAAATCAATGCGAGC------TCC---GGAACAGTGGCATCA---AAG---AAA---GCG---TTT---CAT---GCGCTT---CGACTAATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVSA-SL------------FWR-LLIASVVMLVAGYLGE---V------E--Q-----------G---------------------------GMLWPM-FILGLLAWIYIIYEV-----F--A-GEASKINAS--S-GTVAS-K-K-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927830 [unk-Proteo2-a] PRGD_OTU017_d60558fc53f60a699f164bbd6680b730 gb|KJ927830| PRGD_OTU017_d60558fc53f60a699f164bbd6680b730, putative proteorhodopsin gene, partial cds. PRGD_OTU017_d60558fc53f60a699f164bbd6680b730, putative proteorhodopsin gene, partial cds. KJ927830 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTCTTAACTGTGCCCCTGCAAATCATCGAATTCTTCCTGATCCTGTCAGCAATCGCTGTGGTCAGTGCGTCCCTATTCTGGCGCTTGCTGATTGCATCGGTAGTCATGTTGGTCGCTGGATATCTCGGCGAGGTTGAACAAGGCGGCATGCTCTGGCCAATGTTCATCCTGGGCCTACTTGCTTGGATTTATATCATCTACGAAGTCTTCGCGGGTGAAGCGAGTAAAATCAATGCGAGCTCCGGAACAGTGGCATCAAAGAAAGCGTTTCATGCGCTTCGACTAATTGTAACTGTG LLTVPLQIIEFFLILSAIAVVSASLFWRLLIASVVMLVAGYLGEVEQGGMLWPMFILGLLAWIYIIYEVFAGEASKINASSGTVASKKAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACTGTGCCCCTGCAAATCATCGAATTCTTCCTGATCCTGTCAGCA---------ATC---GCTGTGGTCAGTGCG---TCCCTA------------------------------------TTCTGGCGC---TTGCTGATTGCATCGGTAGTCATGTTGGTCGCTGGATATCTCGGCGAG---------GTT------------------GAA------CAA---------------------------------GGC---------------------------------------------------------------------------------GGCATGCTCTGGCCAATG---TTCATCCTGGGCCTACTTGCTTGGATTTATATCATCTACGAAGTC---------------TTC------GCG---GGTGAAGCGAGTAAAATCAATGCGAGC------TCC---GGAACAGTGGCATCA---AAG---AAA---GCG---TTT---CAT---GCGCTT---CGACTAATTGTAACTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVSA-SL------------FWR-LLIASVVMLVAGYLGE---V------E--Q-----------G---------------------------GMLWPM-FILGLLAWIYIIYEV-----F--A-GEASKINAS--S-GTVAS-K-K-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927786 [unk-Proteo2-a] PRGD_OTU017_otuREP_94379158db0d893aaad7a87502253df2 gb|KJ927786| PRGD_OTU017_otuREP_94379158db0d893aaad7a87502253df2, putative proteorhodopsin gene, partial cds. PRGD_OTU017_otuREP_94379158db0d893aaad7a87502253df2, putative proteorhodopsin gene, partial cds. KJ927786 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Atlantic side (73.9992, 19.2097), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTCTTAACTGTGCCCCTGCAAATCATCGAATTCTTCCTGATCCTGTCAGCAATCGCTGTGGTCAGTGCGTCATTATTCTGGCGCTTGCTGATTGCATCGGTAGTCATGTTGGTCGCTGGATATCTCGGCGAGGTTGAACAAGGCGGCATGCTCTGGCCAATGTTCATCCTGGGCCTACTTGCTTGGATTTATATCATCTACGAAGTCTTCGCGGGTGAAGCGAGTAAAATCAATGCGAGCTCCGGAACAGTGGCATCAAAGAAAGCGTTTCATGCGCTTCGACTCATTGTAACTGTA LLTVPLQIIEFFLILSAIAVVSASLFWRLLIASVVMLVAGYLGEVEQGGMLWPMFILGLLAWIYIIYEVFAGEASKINASSGTVASKKAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACTGTGCCCCTGCAAATCATCGAATTCTTCCTGATCCTGTCAGCA---------ATC---GCTGTGGTCAGTGCG---TCATTA------------------------------------TTCTGGCGC---TTGCTGATTGCATCGGTAGTCATGTTGGTCGCTGGATATCTCGGCGAG---------GTT------------------GAA------CAA---------------------------------GGC---------------------------------------------------------------------------------GGCATGCTCTGGCCAATG---TTCATCCTGGGCCTACTTGCTTGGATTTATATCATCTACGAAGTC---------------TTC------GCG---GGTGAAGCGAGTAAAATCAATGCGAGC------TCC---GGAACAGTGGCATCA---AAG---AAA---GCG---TTT---CAT---GCGCTT---CGACTCATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVSA-SL------------FWR-LLIASVVMLVAGYLGE---V------E--Q-----------G---------------------------GMLWPM-FILGLLAWIYIIYEV-----F--A-GEASKINAS--S-GTVAS-K-K-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927793 [unk-Proteo2-a] PRGD_OTU017_30154da04741142fe9aba6175a7e0d75 gb|KJ927793| PRGD_OTU017_30154da04741142fe9aba6175a7e0d75, putative proteorhodopsin gene, partial cds. PRGD_OTU017_30154da04741142fe9aba6175a7e0d75, putative proteorhodopsin gene, partial cds. KJ927793 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) CTCTTAACTGTACCCCTGCAAATCATCGAATTCTTCCTGATCCTGTCAGCAATCGCTGTGGTCAGTGCGTCATTATTCTGGCGCTTGCTGATTGCATCGGTAGTCATGTTGGTCGCTGGATATCTCGGCGAGGTTGAACAAGGCGGCATGCTCTGGCCCATGTTCATCCTGGGCCTACTTGCTTGGATTTATATTATCTACGAAGTCTTCGCGGGTGAAGCGAGTAAAATCAATGCGAGCTCCGGCACAGTGGCATCAAAGAAAGCGTTTCATGCGCTTCGGCTCATTGTAACCGTA LLTVPLQIIEFFLILSAIAVVSASLFWRLLIASVVMLVAGYLGEVEQGGMLWPMFILGLLAWIYIIYEVFAGEASKINASSGTVASKKAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACTGTACCCCTGCAAATCATCGAATTCTTCCTGATCCTGTCAGCA---------ATC---GCTGTGGTCAGTGCG---TCATTA------------------------------------TTCTGGCGC---TTGCTGATTGCATCGGTAGTCATGTTGGTCGCTGGATATCTCGGCGAG---------GTT------------------GAA------CAA---------------------------------GGC---------------------------------------------------------------------------------GGCATGCTCTGGCCCATG---TTCATCCTGGGCCTACTTGCTTGGATTTATATTATCTACGAAGTC---------------TTC------GCG---GGTGAAGCGAGTAAAATCAATGCGAGC------TCC---GGCACAGTGGCATCA---AAG---AAA---GCG---TTT---CAT---GCGCTT---CGGCTCATTGTAACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVSA-SL------------FWR-LLIASVVMLVAGYLGE---V------E--Q-----------G---------------------------GMLWPM-FILGLLAWIYIIYEV-----F--A-GEASKINAS--S-GTVAS-K-K-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927814 [unk-Proteo2-a] PRGD_OTU017_8414b23a2a56bbf06c7f78fec68c0c46 gb|KJ927814| PRGD_OTU017_8414b23a2a56bbf06c7f78fec68c0c46, putative proteorhodopsin gene, partial cds. PRGD_OTU017_8414b23a2a56bbf06c7f78fec68c0c46, putative proteorhodopsin gene, partial cds. KJ927814 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCTTAACCGTGCCACTTCAAATCATCGAATTTTTCCTCATTCTGTCAGCGATCGCTGTTGTCAGTACGACATTATTCTGGCGCTTGCTGATTGCATCAGTGGTAATGCTGGTCGCTGGATATCTCGGTGAGGTTGAACAAGGCGGTATGCTCTGGCCGATGTTCATCCTGGGCCTACTTGCATGGATTTATATCATCTACGAAATCTTCGCGGGTGAGGCGAGCAAAATCAATGCGAACTCCGGAACAGTCGCATCAAAGAAAGCGTTTCATGCGCTTCGGCTTATTGTCACCGTC LLTVPLQIIEFFLILSAIAVVSTTLFWRLLIASVVMLVAGYLGEVEQGGMLWPMFILGLLAWIYIIYEIFAGEASKINANSGTVASKKAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACCGTGCCACTTCAAATCATCGAATTTTTCCTCATTCTGTCAGCG---------ATC---GCTGTTGTCAGTACG---ACATTA------------------------------------TTCTGGCGC---TTGCTGATTGCATCAGTGGTAATGCTGGTCGCTGGATATCTCGGTGAG---------GTT------------------GAA------CAA---------------------------------GGC---------------------------------------------------------------------------------GGTATGCTCTGGCCGATG---TTCATCCTGGGCCTACTTGCATGGATTTATATCATCTACGAAATC---------------TTC------GCG---GGTGAGGCGAGCAAAATCAATGCGAAC------TCC---GGAACAGTCGCATCA---AAG---AAA---GCG---TTT---CAT---GCGCTT---CGGCTTATTGTCACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVST-TL------------FWR-LLIASVVMLVAGYLGE---V------E--Q-----------G---------------------------GMLWPM-FILGLLAWIYIIYEI-----F--A-GEASKINAN--S-GTVAS-K-K-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927825 [unk-Proteo2-a] PRGD_OTU017_b0faafb1890f8897b506aacd000e1aed gb|KJ927825| PRGD_OTU017_b0faafb1890f8897b506aacd000e1aed, putative proteorhodopsin gene, partial cds. PRGD_OTU017_b0faafb1890f8897b506aacd000e1aed, putative proteorhodopsin gene, partial cds. KJ927825 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) CTCTTAACCGTGCCACTCCAAATCATTGAATTCTTCTTGATCCTATCAGCTATCGCTGTGGTCAGCACGACGTTGTTCTGGCGCTTGCTCATTGCATCGGTGGTTATGCTGGTAGCTGGATATCTCGGTGAGGTCGAACAAGGCGGTATGCTCTGGCCGATGTTTATCCTGGGCCTGCTTGCTTGGATTTATATCATCTACGAAGTTTTCGCGGGTGAAGCGAGCCGAATCAATGCGAACTCCGGAACAGTGGCATCAAAGAAAGCGTTTCATGCGCTTCGGTTAATTGTAACCGTG LLTVPLQIIEFFLILSAIAVVSTTLFWRLLIASVVMLVAGYLGEVEQGGMLWPMFILGLLAWIYIIYEVFAGEASRINANSGTVASKKAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACCGTGCCACTCCAAATCATTGAATTCTTCTTGATCCTATCAGCT---------ATC---GCTGTGGTCAGCACG---ACGTTG------------------------------------TTCTGGCGC---TTGCTCATTGCATCGGTGGTTATGCTGGTAGCTGGATATCTCGGTGAG---------GTC------------------GAA------CAA---------------------------------GGC---------------------------------------------------------------------------------GGTATGCTCTGGCCGATG---TTTATCCTGGGCCTGCTTGCTTGGATTTATATCATCTACGAAGTT---------------TTC------GCG---GGTGAAGCGAGCCGAATCAATGCGAAC------TCC---GGAACAGTGGCATCA---AAG---AAA---GCG---TTT---CAT---GCGCTT---CGGTTAATTGTAACCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVST-TL------------FWR-LLIASVVMLVAGYLGE---V------E--Q-----------G---------------------------GMLWPM-FILGLLAWIYIIYEV-----F--A-GEASRINAN--S-GTVAS-K-K-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927787 [unk-Proteo2-a] PRGD_OTU017_06930f2de0b1c2839c17c03056422bb3 gb|KJ927787| PRGD_OTU017_06930f2de0b1c2839c17c03056422bb3, putative proteorhodopsin gene, partial cds. PRGD_OTU017_06930f2de0b1c2839c17c03056422bb3, putative proteorhodopsin gene, partial cds. KJ927787 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCTTAACCGTGCCCCTTCAAATCATCGAATTCTTCCTGATCCTGTCAGCAATAGCTGTGGTCAGTGCATCATTATTCTGGCGCTTGCTTGTCGCATCAGTAGTCATGCTGGTCGCTGGATATATCGGGGAGGTTGAACAAGGCGGCATGCTCTGGCCAATGTTCATCCTGGGCCTACTTGCCTGGATTTATATCATCTACGAAGTCTTCGCGGGTGAGGCGAGTAAAATCAACGCGAGCTCCGGAACAGTGGCATCAAAGAAAGCGTTTCATGCGCTTCGGTTAATCGTAACCGTC LLTVPLQIIEFFLILSAIAVVSASLFWRLLVASVVMLVAGYIGEVEQGGMLWPMFILGLLAWIYIIYEVFAGEASKINASSGTVASKKAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACCGTGCCCCTTCAAATCATCGAATTCTTCCTGATCCTGTCAGCA---------ATA---GCTGTGGTCAGTGCA---TCATTA------------------------------------TTCTGGCGC---TTGCTTGTCGCATCAGTAGTCATGCTGGTCGCTGGATATATCGGGGAG---------GTT------------------GAA------CAA---------------------------------GGC---------------------------------------------------------------------------------GGCATGCTCTGGCCAATG---TTCATCCTGGGCCTACTTGCCTGGATTTATATCATCTACGAAGTC---------------TTC------GCG---GGTGAGGCGAGTAAAATCAACGCGAGC------TCC---GGAACAGTGGCATCA---AAG---AAA---GCG---TTT---CAT---GCGCTT---CGGTTAATCGTAACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVSA-SL------------FWR-LLVASVVMLVAGYIGE---V------E--Q-----------G---------------------------GMLWPM-FILGLLAWIYIIYEV-----F--A-GEASKINAS--S-GTVAS-K-K-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927810 [unk-Proteo2-a] PRGD_OTU017_6be09b2b235e02f74fe2e791340f18ff gb|KJ927810| PRGD_OTU017_6be09b2b235e02f74fe2e791340f18ff, putative proteorhodopsin gene, partial cds. PRGD_OTU017_6be09b2b235e02f74fe2e791340f18ff, putative proteorhodopsin gene, partial cds. KJ927810 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Arctic Ocean-Atlantic side (71.501, 19.8025) CTCTTAACCGTGCCCCTTCAAATCATTGAATTCTTCCTGATCCTGGCAGCAATAGCTGTGGTCAGTGCATCATTATTCTGGCGCTTGCTTGTCGCATCAGTAGTCATGTTGGTCGCTGGATATATCGGGGAGGTTGAACAAGGCGGCATGCTCTGGCCGATGTTCATCCTGGGCCTACTTGCCTGGTTTTATATCATCTACGAAGTCTTCGCGGGTGAGGCGAGTAAAATCAACGCGAGCTCCGGAACAGTGGCATCAAAGAAAGCGTTTCATGCGCTTCGGTTAATCGTTACCGTC LLTVPLQIIEFFLILAAIAVVSASLFWRLLVASVVMLVAGYIGEVEQGGMLWPMFILGLLAWFYIIYEVFAGEASKINASSGTVASKKAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACCGTGCCCCTTCAAATCATTGAATTCTTCCTGATCCTGGCAGCA---------ATA---GCTGTGGTCAGTGCA---TCATTA------------------------------------TTCTGGCGC---TTGCTTGTCGCATCAGTAGTCATGTTGGTCGCTGGATATATCGGGGAG---------GTT------------------GAA------CAA---------------------------------GGC---------------------------------------------------------------------------------GGCATGCTCTGGCCGATG---TTCATCCTGGGCCTACTTGCCTGGTTTTATATCATCTACGAAGTC---------------TTC------GCG---GGTGAGGCGAGTAAAATCAACGCGAGC------TCC---GGAACAGTGGCATCA---AAG---AAA---GCG---TTT---CAT---GCGCTT---CGGTTAATCGTTACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILAA---I-AVVSA-SL------------FWR-LLVASVVMLVAGYIGE---V------E--Q-----------G---------------------------GMLWPM-FILGLLAWFYIIYEV-----F--A-GEASKINAS--S-GTVAS-K-K-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927817 [unk-Proteo2-a] PRGD_OTU017_99685f47871745a25ce2de4faef9a1b6 gb|KJ927817| PRGD_OTU017_99685f47871745a25ce2de4faef9a1b6, putative proteorhodopsin gene, partial cds. PRGD_OTU017_99685f47871745a25ce2de4faef9a1b6, putative proteorhodopsin gene, partial cds. KJ927817 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-33.28, 45.35) CTCTTAACCGTGCCCCTTCAAATCATCGAATTCTTCCTGATCCTGTCAGCAATCGCTGTGGTCAGTGCATCATTATTCTGGCGCTTGCTTGTCGCATCAGTGGTCATGCTGGTCGCTGGATATATCGGGGAGGTTGAACAAGGCGGCATGCTCTGGCCGATGTTCATCCTGGGCCTACTTGCCTGGTTTTATATCATCTACGAAGTCTTCGCGGGTGAGGCGAGTAAAATCAACGCGAGCTCTGGAACAGTGGCATCAAAGAAAGCGTTTCATGCGCTTCGGTTAATCGTAACCGTC LLTVPLQIIEFFLILSAIAVVSASLFWRLLVASVVMLVAGYIGEVEQGGMLWPMFILGLLAWFYIIYEVFAGEASKINASSGTVASKKAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACCGTGCCCCTTCAAATCATCGAATTCTTCCTGATCCTGTCAGCA---------ATC---GCTGTGGTCAGTGCA---TCATTA------------------------------------TTCTGGCGC---TTGCTTGTCGCATCAGTGGTCATGCTGGTCGCTGGATATATCGGGGAG---------GTT------------------GAA------CAA---------------------------------GGC---------------------------------------------------------------------------------GGCATGCTCTGGCCGATG---TTCATCCTGGGCCTACTTGCCTGGTTTTATATCATCTACGAAGTC---------------TTC------GCG---GGTGAGGCGAGTAAAATCAACGCGAGC------TCT---GGAACAGTGGCATCA---AAG---AAA---GCG---TTT---CAT---GCGCTT---CGGTTAATCGTAACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVSA-SL------------FWR-LLVASVVMLVAGYIGE---V------E--Q-----------G---------------------------GMLWPM-FILGLLAWFYIIYEV-----F--A-GEASKINAS--S-GTVAS-K-K-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927809 [unk-Proteo2-a] PRGD_OTU017_68c11576fb89e1eecd4f4379cce8b64d gb|KJ927809| PRGD_OTU017_68c11576fb89e1eecd4f4379cce8b64d, putative proteorhodopsin gene, partial cds. PRGD_OTU017_68c11576fb89e1eecd4f4379cce8b64d, putative proteorhodopsin gene, partial cds. KJ927809 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTCTTAACCGTGCCCCTTCAAATCATCGAATTCTTCCTGATCCTGTCAGCAATCGCTGTGGTCAGTGCATCATTATTCTGGCGCTTGCTTGTCGCATCAGTGGTCATGCTGGTCGCTGGATATCTCGGGGAGGTTGAACAAGGCGGCATGCTCTGGCCGATGTTCATCCTGGGCCTACTTGCCTGGTTTTATATCATCTACGAAGTCTTCGCGGGCGAGGCGAGTAAAATCAACGCGAGCTCTGGAACAGTGGCATCAAAGAAAGCGTTCCATGCGCTTCGGTTAATCGTAACCGTC LLTVPLQIIEFFLILSAIAVVSASLFWRLLVASVVMLVAGYLGEVEQGGMLWPMFILGLLAWFYIIYEVFAGEASKINASSGTVASKKAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACCGTGCCCCTTCAAATCATCGAATTCTTCCTGATCCTGTCAGCA---------ATC---GCTGTGGTCAGTGCA---TCATTA------------------------------------TTCTGGCGC---TTGCTTGTCGCATCAGTGGTCATGCTGGTCGCTGGATATCTCGGGGAG---------GTT------------------GAA------CAA---------------------------------GGC---------------------------------------------------------------------------------GGCATGCTCTGGCCGATG---TTCATCCTGGGCCTACTTGCCTGGTTTTATATCATCTACGAAGTC---------------TTC------GCG---GGCGAGGCGAGTAAAATCAACGCGAGC------TCT---GGAACAGTGGCATCA---AAG---AAA---GCG---TTC---CAT---GCGCTT---CGGTTAATCGTAACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVSA-SL------------FWR-LLVASVVMLVAGYLGE---V------E--Q-----------G---------------------------GMLWPM-FILGLLAWFYIIYEV-----F--A-GEASKINAS--S-GTVAS-K-K-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927789 [unk-Proteo2-a] PRGD_OTU017_12d3fe3453142d03698ee2eb1b5807d0 gb|KJ927789| PRGD_OTU017_12d3fe3453142d03698ee2eb1b5807d0, putative proteorhodopsin gene, partial cds. PRGD_OTU017_12d3fe3453142d03698ee2eb1b5807d0, putative proteorhodopsin gene, partial cds. KJ927789 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) CTCTTAACCGTGCCACTTCAAATCATCGAATTCTTCCTGATCCTATCAGCGATAGCTGTGGTCAGTGCTAATTTGTTCTGGCGCTTGCTTATTGCATCAGTGGTCATGCTGGTCGCTGGATATCTCGGCGAGGTTGAACAAGGGGGCATGCTTTGGCCAATGTTCATCCTGGGCCTACTCGCCTGGATTTATATCATCTACGAAGTCTTCGCGGGTGAGGCGAGTAAAATCAACGCGAACTCGGGAACGGTAGCATCAAAGAAAGCGTTTCATGCACTTCGGTTGATCGTAACCGTC LLTVPLQIIEFFLILSAIAVVSANLFWRLLIASVVMLVAGYLGEVEQGGMLWPMFILGLLAWIYIIYEVFAGEASKINANSGTVASKKAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACCGTGCCACTTCAAATCATCGAATTCTTCCTGATCCTATCAGCG---------ATA---GCTGTGGTCAGTGCT---AATTTG------------------------------------TTCTGGCGC---TTGCTTATTGCATCAGTGGTCATGCTGGTCGCTGGATATCTCGGCGAG---------GTT------------------GAA------CAA---------------------------------GGG---------------------------------------------------------------------------------GGCATGCTTTGGCCAATG---TTCATCCTGGGCCTACTCGCCTGGATTTATATCATCTACGAAGTC---------------TTC------GCG---GGTGAGGCGAGTAAAATCAACGCGAAC------TCG---GGAACGGTAGCATCA---AAG---AAA---GCG---TTT---CAT---GCACTT---CGGTTGATCGTAACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVSA-NL------------FWR-LLIASVVMLVAGYLGE---V------E--Q-----------G---------------------------GMLWPM-FILGLLAWIYIIYEV-----F--A-GEASKINAN--S-GTVAS-K-K-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927798 [unk-Proteo2-a] PRGD_OTU017_3b70d614e0b4d9d5c8d88bc25cc6d201 gb|KJ927798| PRGD_OTU017_3b70d614e0b4d9d5c8d88bc25cc6d201, putative proteorhodopsin gene, partial cds. PRGD_OTU017_3b70d614e0b4d9d5c8d88bc25cc6d201, putative proteorhodopsin gene, partial cds. KJ927798 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTCTTAACCGTGCCACTTCAAATCATCGAATTCTTCCTGATCCTGTCAGCGATAGCTGTGGTCAGTGCTACATTGTTTTGGCGCTTACTTATTGCATCAGTGGTCATGCTGGTCGCTGGATATCTCGGCGAGGTTGAACAAGGGGGCATGCTTTGGCCAATGTTCATCCTGGGCCTACTCGCCTGGATTTATATCATCTACGAAGTCTTCGCGGGTGAGGCGAGTAAGATCAACGCGAACTCGGGAACGGTAGCATCAAAGAAAGCGTTTCATGCACTTCGGTTGATCGTAACCGTC LLTVPLQIIEFFLILSAIAVVSATLFWRLLIASVVMLVAGYLGEVEQGGMLWPMFILGLLAWIYIIYEVFAGEASKINANSGTVASKKAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACCGTGCCACTTCAAATCATCGAATTCTTCCTGATCCTGTCAGCG---------ATA---GCTGTGGTCAGTGCT---ACATTG------------------------------------TTTTGGCGC---TTACTTATTGCATCAGTGGTCATGCTGGTCGCTGGATATCTCGGCGAG---------GTT------------------GAA------CAA---------------------------------GGG---------------------------------------------------------------------------------GGCATGCTTTGGCCAATG---TTCATCCTGGGCCTACTCGCCTGGATTTATATCATCTACGAAGTC---------------TTC------GCG---GGTGAGGCGAGTAAGATCAACGCGAAC------TCG---GGAACGGTAGCATCA---AAG---AAA---GCG---TTT---CAT---GCACTT---CGGTTGATCGTAACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVSA-TL------------FWR-LLIASVVMLVAGYLGE---V------E--Q-----------G---------------------------GMLWPM-FILGLLAWIYIIYEV-----F--A-GEASKINAN--S-GTVAS-K-K-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927831 [unk-Proteo2-a] PRGD_OTU017_d7c1a7a6f9a8370435077aebebcee831 gb|KJ927831| PRGD_OTU017_d7c1a7a6f9a8370435077aebebcee831, putative proteorhodopsin gene, partial cds. PRGD_OTU017_d7c1a7a6f9a8370435077aebebcee831, putative proteorhodopsin gene, partial cds. KJ927831 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTCTTAACCGTGCCACTTCAAATCATCGAATTCTTCCTGATCCTATCAGCAATAGCTGTGGTAAGTGCTACATTGTTCTGGCGTTTGCTTATTGCATCAGTGGTCATGCTGGTCGCTGGATATCTCGGCGAGGTTGAACAAGGGGGCATGCTTTGGCCAATGTTCATCCTGGGCCTACTCGCCTGGATTTATATCATCTACGAAGTCTTCGCGGGTGAGGCGAGTAAAATTAACGCGAACTCGGGAACGGTAGCATCAAAGAAAGCGTTTCATGCACTTCGGTTGATCGTTACCGTC LLTVPLQIIEFFLILSAIAVVSATLFWRLLIASVVMLVAGYLGEVEQGGMLWPMFILGLLAWIYIIYEVFAGEASKINANSGTVASKKAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACCGTGCCACTTCAAATCATCGAATTCTTCCTGATCCTATCAGCA---------ATA---GCTGTGGTAAGTGCT---ACATTG------------------------------------TTCTGGCGT---TTGCTTATTGCATCAGTGGTCATGCTGGTCGCTGGATATCTCGGCGAG---------GTT------------------GAA------CAA---------------------------------GGG---------------------------------------------------------------------------------GGCATGCTTTGGCCAATG---TTCATCCTGGGCCTACTCGCCTGGATTTATATCATCTACGAAGTC---------------TTC------GCG---GGTGAGGCGAGTAAAATTAACGCGAAC------TCG---GGAACGGTAGCATCA---AAG---AAA---GCG---TTT---CAT---GCACTT---CGGTTGATCGTTACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVSA-TL------------FWR-LLIASVVMLVAGYLGE---V------E--Q-----------G---------------------------GMLWPM-FILGLLAWIYIIYEV-----F--A-GEASKINAN--S-GTVAS-K-K-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927790 [unk-Proteo2-a] PRGD_OTU017_15fe0731fb5c0df73578912cb263e48b gb|KJ927790| PRGD_OTU017_15fe0731fb5c0df73578912cb263e48b, putative proteorhodopsin gene, partial cds. PRGD_OTU017_15fe0731fb5c0df73578912cb263e48b, putative proteorhodopsin gene, partial cds. KJ927790 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCTTAACTGTGCCACTCCAAATCATCGAATTCTTCCTGATCCTGTCAGCAATCGCTGTAGTCAGTGCGACATTGTTCTGGCGCTTGCTCATCGCATCAGTGGTTATGCTGGTCGCCGGATACCTCGGGGAGGTCGAACAAGGTGGCATGCTCTGGCCGATGTTCACCTTGGGCATGCTTGCGTGGATTTATATCATCTACGAAATCTTCGCGGGTGAAGCGAGCAAGATCAACGCGAACTCCGGAACAGTAGCATCAAAGAAAGCGTTTCATGCGCTTAGGCTCATCGTAACCGTC LLTVPLQIIEFFLILSAIAVVSATLFWRLLIASVVMLVAGYLGEVEQGGMLWPMFTLGMLAWIYIIYEIFAGEASKINANSGTVASKKAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACTGTGCCACTCCAAATCATCGAATTCTTCCTGATCCTGTCAGCA---------ATC---GCTGTAGTCAGTGCG---ACATTG------------------------------------TTCTGGCGC---TTGCTCATCGCATCAGTGGTTATGCTGGTCGCCGGATACCTCGGGGAG---------GTC------------------GAA------CAA---------------------------------GGT---------------------------------------------------------------------------------GGCATGCTCTGGCCGATG---TTCACCTTGGGCATGCTTGCGTGGATTTATATCATCTACGAAATC---------------TTC------GCG---GGTGAAGCGAGCAAGATCAACGCGAAC------TCC---GGAACAGTAGCATCA---AAG---AAA---GCG---TTT---CAT---GCGCTT---AGGCTCATCGTAACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVSA-TL------------FWR-LLIASVVMLVAGYLGE---V------E--Q-----------G---------------------------GMLWPM-FTLGMLAWIYIIYEI-----F--A-GEASKINAN--S-GTVAS-K-K-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927833 [unk-Proteo2-a] PRGD_OTU017_ecd90d7e2ca4350a1eaaaa87f377aab3 gb|KJ927833| PRGD_OTU017_ecd90d7e2ca4350a1eaaaa87f377aab3, putative proteorhodopsin gene, partial cds. PRGD_OTU017_ecd90d7e2ca4350a1eaaaa87f377aab3, putative proteorhodopsin gene, partial cds. KJ927833 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCTTAACCGTGCCGCTCCAAATCATCGAATTCTTCCTGATCCTGTCAGCAATCGCTGTAGTCAGTACGACATTGTTTTGGCGCTTGCTCATCGCATCAGTGGTCATGCTGGTCGCCGGATACCTCGGGGAGGTTGAACAAGGCAGCATGCTCTGGCCGATGTTCATCTTGGGCTTGCTTGCGTGGATTTATATCATCTACGAAGTCTTCGCGGGTGAAGCGAGCAAGATCAACGCGAACTCCGGAACAGTAGCATCAAAGAAAGCGTTTCATGCGCTTAGGCTCATCGTAACCGTC LLTVPLQIIEFFLILSAIAVVSTTLFWRLLIASVVMLVAGYLGEVEQGSMLWPMFILGLLAWIYIIYEVFAGEASKINANSGTVASKKAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACCGTGCCGCTCCAAATCATCGAATTCTTCCTGATCCTGTCAGCA---------ATC---GCTGTAGTCAGTACG---ACATTG------------------------------------TTTTGGCGC---TTGCTCATCGCATCAGTGGTCATGCTGGTCGCCGGATACCTCGGGGAG---------GTT------------------GAA------CAA---------------------------------GGC---------------------------------------------------------------------------------AGCATGCTCTGGCCGATG---TTCATCTTGGGCTTGCTTGCGTGGATTTATATCATCTACGAAGTC---------------TTC------GCG---GGTGAAGCGAGCAAGATCAACGCGAAC------TCC---GGAACAGTAGCATCA---AAG---AAA---GCG---TTT---CAT---GCGCTT---AGGCTCATCGTAACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVST-TL------------FWR-LLIASVVMLVAGYLGE---V------E--Q-----------G---------------------------SMLWPM-FILGLLAWIYIIYEV-----F--A-GEASKINAN--S-GTVAS-K-K-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927792 [unk-Proteo2-a] PRGD_OTU017_1f855220d74e8b6c7c0a2bd912d0f700 gb|KJ927792| PRGD_OTU017_1f855220d74e8b6c7c0a2bd912d0f700, putative proteorhodopsin gene, partial cds. PRGD_OTU017_1f855220d74e8b6c7c0a2bd912d0f700, putative proteorhodopsin gene, partial cds. KJ927792 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-23.5956, 69.0419) CTCTTAACTGTGCCACTCCAAATCATCGAATTCTTCCTGATCCTGTCAGCAATCGCTGTAGTCAGTACGACATTGTTCTGGCGCTTGCTCATCGCATCAGTGGTCATGCTGGTCGCCGGATACCTCGGCGAGGTCGAACAAGGCGGCATGCTCTGGCCGATGTTCATCCTGGGCTTGCTTGCTTGGATTTATATCATCTACGAAATTTTCGCGGGTGAAGCGAGCAAGATCAACGCGAACTCCGGAACAGTGGCATCAAAGCAAGCGTTTCATGCGCTTCGGCTCATCGTGACCGTT LLTVPLQIIEFFLILSAIAVVSTTLFWRLLIASVVMLVAGYLGEVEQGGMLWPMFILGLLAWIYIIYEIFAGEASKINANSGTVASKQAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACTGTGCCACTCCAAATCATCGAATTCTTCCTGATCCTGTCAGCA---------ATC---GCTGTAGTCAGTACG---ACATTG------------------------------------TTCTGGCGC---TTGCTCATCGCATCAGTGGTCATGCTGGTCGCCGGATACCTCGGCGAG---------GTC------------------GAA------CAA---------------------------------GGC---------------------------------------------------------------------------------GGCATGCTCTGGCCGATG---TTCATCCTGGGCTTGCTTGCTTGGATTTATATCATCTACGAAATT---------------TTC------GCG---GGTGAAGCGAGCAAGATCAACGCGAAC------TCC---GGAACAGTGGCATCA---AAG---CAA---GCG---TTT---CAT---GCGCTT---CGGCTCATCGTGACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVST-TL------------FWR-LLIASVVMLVAGYLGE---V------E--Q-----------G---------------------------GMLWPM-FILGLLAWIYIIYEI-----F--A-GEASKINAN--S-GTVAS-K-Q-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927802 [unk-Proteo2-a] PRGD_OTU017_49922cc1bbfbcdc76b5a9203813dbbf1 gb|KJ927802| PRGD_OTU017_49922cc1bbfbcdc76b5a9203813dbbf1, putative proteorhodopsin gene, partial cds. PRGD_OTU017_49922cc1bbfbcdc76b5a9203813dbbf1, putative proteorhodopsin gene, partial cds. KJ927802 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) CTCTTAACTGTGCCGCTCCAAATCATCGAATTCTTCCTGATTCTGTCAGCAATCGCCGTAGTCAGTACGACATTGTTCTGGCGCTTGCTCATCGCATCAGTGGTCATGCTGGTCGCCGGATACCTCGGCGAGGTCGAACAAGGCGGCATGCTCTGGCCGATGTTCATCCTGGGCTTGCTTGCTTGGGTTTATATCATCTACGAAATTTTCGCGGGTGAAGCGAGCAAGATCAACGCGAACTCGGGAACAGTGGCATCAAAACAAGCGTTTCATGCGCTTCGGCTCATCGTGACCGTT LLTVPLQIIEFFLILSAIAVVSTTLFWRLLIASVVMLVAGYLGEVEQGGMLWPMFILGLLAWVYIIYEIFAGEASKINANSGTVASKQAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACTGTGCCGCTCCAAATCATCGAATTCTTCCTGATTCTGTCAGCA---------ATC---GCCGTAGTCAGTACG---ACATTG------------------------------------TTCTGGCGC---TTGCTCATCGCATCAGTGGTCATGCTGGTCGCCGGATACCTCGGCGAG---------GTC------------------GAA------CAA---------------------------------GGC---------------------------------------------------------------------------------GGCATGCTCTGGCCGATG---TTCATCCTGGGCTTGCTTGCTTGGGTTTATATCATCTACGAAATT---------------TTC------GCG---GGTGAAGCGAGCAAGATCAACGCGAAC------TCG---GGAACAGTGGCATCA---AAA---CAA---GCG---TTT---CAT---GCGCTT---CGGCTCATCGTGACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVST-TL------------FWR-LLIASVVMLVAGYLGE---V------E--Q-----------G---------------------------GMLWPM-FILGLLAWVYIIYEI-----F--A-GEASKINAN--S-GTVAS-K-Q-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927805 [unk-Proteo2-a] PRGD_OTU017_54d3c1dadc50017c504260f99bdbd6df gb|KJ927805| PRGD_OTU017_54d3c1dadc50017c504260f99bdbd6df, putative proteorhodopsin gene, partial cds. PRGD_OTU017_54d3c1dadc50017c504260f99bdbd6df, putative proteorhodopsin gene, partial cds. KJ927805 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTCTTAACTGTGCCACTCCAAATCATCGAATTTTTCCTGATCCTGTCAGCAATCGCTGTAGTCAGTACGACATTATTCTGGCGCTTGCTTGTCGCATCAGTAGTCATGCTGGTCGCCGGATACCTCGGCGAGGTCGAACAAGGCGGCATGCTATGGCCGATGTTCATCCTGGGCTTGCTTGCCTGGATTTATATCATCTACGAAATTTTCGCGGGTGAAGCGAGCAAGATCAACGCGAACTCCGGAACAGTGGCGTCAAAGCAAGCGTTTCATGCGCTTCGGCTCATTGTAACCGTT LLTVPLQIIEFFLILSAIAVVSTTLFWRLLVASVVMLVAGYLGEVEQGGMLWPMFILGLLAWIYIIYEIFAGEASKINANSGTVASKQAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACTGTGCCACTCCAAATCATCGAATTTTTCCTGATCCTGTCAGCA---------ATC---GCTGTAGTCAGTACG---ACATTA------------------------------------TTCTGGCGC---TTGCTTGTCGCATCAGTAGTCATGCTGGTCGCCGGATACCTCGGCGAG---------GTC------------------GAA------CAA---------------------------------GGC---------------------------------------------------------------------------------GGCATGCTATGGCCGATG---TTCATCCTGGGCTTGCTTGCCTGGATTTATATCATCTACGAAATT---------------TTC------GCG---GGTGAAGCGAGCAAGATCAACGCGAAC------TCC---GGAACAGTGGCGTCA---AAG---CAA---GCG---TTT---CAT---GCGCTT---CGGCTCATTGTAACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVST-TL------------FWR-LLVASVVMLVAGYLGE---V------E--Q-----------G---------------------------GMLWPM-FILGLLAWIYIIYEI-----F--A-GEASKINAN--S-GTVAS-K-Q-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927819 [unk-Proteo2-a] PRGD_OTU017_9c143df69fd6d2e53ae3e3737a197f2e gb|KJ927819| PRGD_OTU017_9c143df69fd6d2e53ae3e3737a197f2e, putative proteorhodopsin gene, partial cds. PRGD_OTU017_9c143df69fd6d2e53ae3e3737a197f2e, putative proteorhodopsin gene, partial cds. KJ927819 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCTTAACTGTGCCACTCCAAATCATCGAATTCTTCCTGATCCTGTCAGCAATCGCTGTAGTCAGTACGACATTGTTCTGGCGCTTGCTCATCGCATCAGTGGTCATGCTGGTCGCCGGATACCTCGGCGAGGTCGAACAAGGCGGCATGCTCTGGCCGATGTTCATCCTGGGCTTGCTTGCTTGGATTTATATCATCTACGAAATTTTCGCGGGTGAAGCGAGCAAGATCAACGCCAACTCCGGAACAGTGGCATCAAAGCAAGCGTTTCATGCACTTCGACTCATCGTGACCGTT LLTVPLQIIEFFLILSAIAVVSTTLFWRLLIASVVMLVAGYLGEVEQGGMLWPMFILGLLAWIYIIYEIFAGEASKINANSGTVASKQAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACTGTGCCACTCCAAATCATCGAATTCTTCCTGATCCTGTCAGCA---------ATC---GCTGTAGTCAGTACG---ACATTG------------------------------------TTCTGGCGC---TTGCTCATCGCATCAGTGGTCATGCTGGTCGCCGGATACCTCGGCGAG---------GTC------------------GAA------CAA---------------------------------GGC---------------------------------------------------------------------------------GGCATGCTCTGGCCGATG---TTCATCCTGGGCTTGCTTGCTTGGATTTATATCATCTACGAAATT---------------TTC------GCG---GGTGAAGCGAGCAAGATCAACGCCAAC------TCC---GGAACAGTGGCATCA---AAG---CAA---GCG---TTT---CAT---GCACTT---CGACTCATCGTGACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVST-TL------------FWR-LLIASVVMLVAGYLGE---V------E--Q-----------G---------------------------GMLWPM-FILGLLAWIYIIYEI-----F--A-GEASKINAN--S-GTVAS-K-Q-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927816 [unk-Proteo2-a] PRGD_OTU017_9195fb6c6403d82a931b3ff8d7772692 gb|KJ927816| PRGD_OTU017_9195fb6c6403d82a931b3ff8d7772692, putative proteorhodopsin gene, partial cds. PRGD_OTU017_9195fb6c6403d82a931b3ff8d7772692, putative proteorhodopsin gene, partial cds. KJ927816 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683) CTTTTGACTGTGCCCCTGCAAATCATCGAATTTTTCCTAATTCTGTCAGCAATAGCTGTAGTCAGCACGACATTGTTCTGGCGCTTACTCATCGCATCAGTGGTCATGCTGGTCGCCGGATACCTCGGCGAGGTTGAACAAGGCGGCATGCTATGGCCAATGTTCATCCTAGGCTTGCTTGCTTGGGTTTATATCATCTACGAAATTTTCGCGGGTGAGGCGAGCAAGATCAACGCAAACTCGGGAACAGTGGCATCAAAGCAAGCGTTTCATGCGCTTCGGCTCATCGTGACCGTC LLTVPLQIIEFFLILSAIAVVSTTLFWRLLIASVVMLVAGYLGEVEQGGMLWPMFILGLLAWVYIIYEIFAGEASKINANSGTVASKQAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTGACTGTGCCCCTGCAAATCATCGAATTTTTCCTAATTCTGTCAGCA---------ATA---GCTGTAGTCAGCACG---ACATTG------------------------------------TTCTGGCGC---TTACTCATCGCATCAGTGGTCATGCTGGTCGCCGGATACCTCGGCGAG---------GTT------------------GAA------CAA---------------------------------GGC---------------------------------------------------------------------------------GGCATGCTATGGCCAATG---TTCATCCTAGGCTTGCTTGCTTGGGTTTATATCATCTACGAAATT---------------TTC------GCG---GGTGAGGCGAGCAAGATCAACGCAAAC------TCG---GGAACAGTGGCATCA---AAG---CAA---GCG---TTT---CAT---GCGCTT---CGGCTCATCGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVST-TL------------FWR-LLIASVVMLVAGYLGE---V------E--Q-----------G---------------------------GMLWPM-FILGLLAWVYIIYEI-----F--A-GEASKINAN--S-GTVAS-K-Q-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927824 [unk-Proteo2-a] PRGD_OTU017_b0869d5ec504b33e5792f7c2cebdce99 gb|KJ927824| PRGD_OTU017_b0869d5ec504b33e5792f7c2cebdce99, putative proteorhodopsin gene, partial cds. PRGD_OTU017_b0869d5ec504b33e5792f7c2cebdce99, putative proteorhodopsin gene, partial cds. KJ927824 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCTTAACTGTGCCCCTGCAAATCATCGAATTTTTCCTAATTCTGTCAGCAATAGCTGTAGTCAGCACGACATTGTTCTGGCGTTTACTCATCGCATCAGTGGTCATGCTGGTCGCCGGATACCTCGGCGAGGTCGAACAAGGCGGCATGCTATGGCCAATGTTCATCTTAGGCTTGCTTGCTTGGGTTTATATCATCTACGAAATTTTCGCGGGTGAGGCGAGCAAGATCAACGCAAACTCCGGAACAGTGGCATCAAAGCAAGCGTTTCATGCGCTTCGGCTCATCGTGACCGTC LLTVPLQIIEFFLILSAIAVVSTTLFWRLLIASVVMLVAGYLGEVEQGGMLWPMFILGLLAWVYIIYEIFAGEASKINANSGTVASKQAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACTGTGCCCCTGCAAATCATCGAATTTTTCCTAATTCTGTCAGCA---------ATA---GCTGTAGTCAGCACG---ACATTG------------------------------------TTCTGGCGT---TTACTCATCGCATCAGTGGTCATGCTGGTCGCCGGATACCTCGGCGAG---------GTC------------------GAA------CAA---------------------------------GGC---------------------------------------------------------------------------------GGCATGCTATGGCCAATG---TTCATCTTAGGCTTGCTTGCTTGGGTTTATATCATCTACGAAATT---------------TTC------GCG---GGTGAGGCGAGCAAGATCAACGCAAAC------TCC---GGAACAGTGGCATCA---AAG---CAA---GCG---TTT---CAT---GCGCTT---CGGCTCATCGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVST-TL------------FWR-LLIASVVMLVAGYLGE---V------E--Q-----------G---------------------------GMLWPM-FILGLLAWVYIIYEI-----F--A-GEASKINAN--S-GTVAS-K-Q-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927806 [unk-Proteo2-a] PRGD_OTU017_5c75ee7fccb51dfd82286d40abb61313 gb|KJ927806| PRGD_OTU017_5c75ee7fccb51dfd82286d40abb61313, putative proteorhodopsin gene, partial cds. PRGD_OTU017_5c75ee7fccb51dfd82286d40abb61313, putative proteorhodopsin gene, partial cds. KJ927806 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -33.28, 45.35) CTCTTAACTGTGCCCCTGCAAATCATCGAATTCTTCCTAATCCTGTCAGCAATCGCTGTAGTCAGCTCGACATTATTCTGGCGCCTACTCATCGCATCAGTGGTCATGCTGATCGCCGGATACCTCGGCGAGGTCGAACAAGGCGGCATGCTATGGCCAATGTTCATCCTAGGCTTGCTTGCTTGGATTTATATCATCTACGAAATTTTCGCGGGTGAAGCGAGCAAGATCAACGCAAACTCCGGAACAGTGGCATCAAAGCAAGCGTTTCATGCGCTTCGGCTCATCGTGACGGTC LLTVPLQIIEFFLILSAIAVVSSTLFWRLLIASVVMLIAGYLGEVEQGGMLWPMFILGLLAWIYIIYEIFAGEASKINANSGTVASKQAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACTGTGCCCCTGCAAATCATCGAATTCTTCCTAATCCTGTCAGCA---------ATC---GCTGTAGTCAGCTCG---ACATTA------------------------------------TTCTGGCGC---CTACTCATCGCATCAGTGGTCATGCTGATCGCCGGATACCTCGGCGAG---------GTC------------------GAA------CAA---------------------------------GGC---------------------------------------------------------------------------------GGCATGCTATGGCCAATG---TTCATCCTAGGCTTGCTTGCTTGGATTTATATCATCTACGAAATT---------------TTC------GCG---GGTGAAGCGAGCAAGATCAACGCAAAC------TCC---GGAACAGTGGCATCA---AAG---CAA---GCG---TTT---CAT---GCGCTT---CGGCTCATCGTGACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVSS-TL------------FWR-LLIASVVMLIAGYLGE---V------E--Q-----------G---------------------------GMLWPM-FILGLLAWIYIIYEI-----F--A-GEASKINAN--S-GTVAS-K-Q-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927813 [unk-Proteo2-a] PRGD_OTU017_82747d1d7e4c7bf04212afd4fd7953d6 gb|KJ927813| PRGD_OTU017_82747d1d7e4c7bf04212afd4fd7953d6, putative proteorhodopsin gene, partial cds. PRGD_OTU017_82747d1d7e4c7bf04212afd4fd7953d6, putative proteorhodopsin gene, partial cds. KJ927813 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-33.28, 45.35) CTCTTAACTGTGCCACTCCAAATCATCGAATTCTTCCTGATCCTGTCAGCAATCGCTGTGGTCAGTACAACATTGTTCTGGCGCTTGCTCATCGCATCAGTGGTCATGCTGGTCGCCGGATACCTCGGCGAGGTAGAACAAGGCGGCATGCTCTGGCCGATGTTCATCCTGGGCTTGCTTGCTTGGGTCTATATCATCTACGAAATTTTTGCAGGTGAAGCGAGCAAGATCAACGCGAACTCCGGAACAGTCGCATCAAAACAGGCGTTTCATGCGCTTCGCCTCATCGTTACTGTC LLTVPLQIIEFFLILSAIAVVSTTLFWRLLIASVVMLVAGYLGEVEQGGMLWPMFILGLLAWVYIIYEIFAGEASKINANSGTVASKQAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACTGTGCCACTCCAAATCATCGAATTCTTCCTGATCCTGTCAGCA---------ATC---GCTGTGGTCAGTACA---ACATTG------------------------------------TTCTGGCGC---TTGCTCATCGCATCAGTGGTCATGCTGGTCGCCGGATACCTCGGCGAG---------GTA------------------GAA------CAA---------------------------------GGC---------------------------------------------------------------------------------GGCATGCTCTGGCCGATG---TTCATCCTGGGCTTGCTTGCTTGGGTCTATATCATCTACGAAATT---------------TTT------GCA---GGTGAAGCGAGCAAGATCAACGCGAAC------TCC---GGAACAGTCGCATCA---AAA---CAG---GCG---TTT---CAT---GCGCTT---CGCCTCATCGTTACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVST-TL------------FWR-LLIASVVMLVAGYLGE---V------E--Q-----------G---------------------------GMLWPM-FILGLLAWVYIIYEI-----F--A-GEASKINAN--S-GTVAS-K-Q-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927796 [unk-Proteo2-a] PRGD_OTU017_37e72df98f3b17d2c74a9829741ad790 gb|KJ927796| PRGD_OTU017_37e72df98f3b17d2c74a9829741ad790, putative proteorhodopsin gene, partial cds. PRGD_OTU017_37e72df98f3b17d2c74a9829741ad790, putative proteorhodopsin gene, partial cds. KJ927796 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-33.28, 45.35) CTCTTAACAGTCCCCCTTCAAATCATTGAATTCTTCCTGATCTTGTCAGCAATTGCTGTCGTCAGCGCGACGTTGTTCTGGCGTTTGCTTATTGCATCAGTGGTAATGCTGGTCGCCGGATACCTTGGCGAGGTGGAACAGGGCAGTATGCTCTGGCCCATGTTCATATTAGGCATGCTTGCATGGATTTACATCATCTATGAAATCTTCGCGGGTGAAGCGAGTAAGATCAACGAAAATTCTGGAACAGTAGCATCAAAGAAGGCGTTTCATGCGCTTCGCCTCATCGTTACTGTC LLTVPLQIIEFFLILSAIAVVSATLFWRLLIASVVMLVAGYLGEVEQGSMLWPMFILGMLAWIYIIYEIFAGEASKINENSGTVASKKAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACAGTCCCCCTTCAAATCATTGAATTCTTCCTGATCTTGTCAGCA---------ATT---GCTGTCGTCAGCGCG---ACGTTG------------------------------------TTCTGGCGT---TTGCTTATTGCATCAGTGGTAATGCTGGTCGCCGGATACCTTGGCGAG---------GTG------------------GAA------CAG---------------------------------GGC---------------------------------------------------------------------------------AGTATGCTCTGGCCCATG---TTCATATTAGGCATGCTTGCATGGATTTACATCATCTATGAAATC---------------TTC------GCG---GGTGAAGCGAGTAAGATCAACGAAAAT------TCT---GGAACAGTAGCATCA---AAG---AAG---GCG---TTT---CAT---GCGCTT---CGCCTCATCGTTACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVSA-TL------------FWR-LLIASVVMLVAGYLGE---V------E--Q-----------G---------------------------SMLWPM-FILGMLAWIYIIYEI-----F--A-GEASKINEN--S-GTVAS-K-K-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927827 [unk-Proteo2-a] PRGD_OTU017_b7622561e3b01260aefba7309b6659e6 gb|KJ927827| PRGD_OTU017_b7622561e3b01260aefba7309b6659e6, putative proteorhodopsin gene, partial cds. PRGD_OTU017_b7622561e3b01260aefba7309b6659e6, putative proteorhodopsin gene, partial cds. KJ927827 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45; -33.28, 45.35) CTCTTAACAGTCCCACTTCAAATCATTGAATTCTTCCTGATCTTGTCAGCAATTGCTGTCGTCAGTGCGACGTTGTTCTGGCGTTTGCTTATTGCATCAGTGGTAATGCTGGTAGCCGGATACCTTGGCGAGGTGGAACAGGGCAGTATGCTCTGGCCCATGTTCATATTGGGCATGCTTGCATGGATTTACATAATCTATGAAATCTTCGCGGGTGAAGCGAGTAAGATCAACGAAAACTCTGGAACAGTAGCATCAAAGAAGGCGTTTCATGCGCTTCGCCTCATCGTTACTGTC LLTVPLQIIEFFLILSAIAVVSATLFWRLLIASVVMLVAGYLGEVEQGSMLWPMFILGMLAWIYIIYEIFAGEASKINENSGTVASKKAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACAGTCCCACTTCAAATCATTGAATTCTTCCTGATCTTGTCAGCA---------ATT---GCTGTCGTCAGTGCG---ACGTTG------------------------------------TTCTGGCGT---TTGCTTATTGCATCAGTGGTAATGCTGGTAGCCGGATACCTTGGCGAG---------GTG------------------GAA------CAG---------------------------------GGC---------------------------------------------------------------------------------AGTATGCTCTGGCCCATG---TTCATATTGGGCATGCTTGCATGGATTTACATAATCTATGAAATC---------------TTC------GCG---GGTGAAGCGAGTAAGATCAACGAAAAC------TCT---GGAACAGTAGCATCA---AAG---AAG---GCG---TTT---CAT---GCGCTT---CGCCTCATCGTTACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVSA-TL------------FWR-LLIASVVMLVAGYLGE---V------E--Q-----------G---------------------------SMLWPM-FILGMLAWIYIIYEI-----F--A-GEASKINEN--S-GTVAS-K-K-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927815 [unk-Proteo2-a] PRGD_OTU017_8a058d71e2afb7f1b859096f8fbd3f05 gb|KJ927815| PRGD_OTU017_8a058d71e2afb7f1b859096f8fbd3f05, putative proteorhodopsin gene, partial cds. PRGD_OTU017_8a058d71e2afb7f1b859096f8fbd3f05, putative proteorhodopsin gene, partial cds. KJ927815 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTCTTAACAGTCCCACTTCAAATCATTGAATTCTTCCTGATCCTGTCAGCAATTGCTGCCGTCAGTGCGACGTTGTTCTGGCGTTTGCTTATTGCATCAGTGGTAATGCTGGTAGCCGGATACCTTGGCGAGGTCGAACAGGGCAGTATGCTCTGGCCCATGTTCATTTTGGGCATGCTTGCATGGATTTACATCATCTATGAAATCTTCGCTGGTGAAGCGAGTAAGATCAACGAAAACTCTGGAACGGTAGCATCAAAGAAGGCGTTTCATGCGCTTCGCCTCATCGTTACTGTC LLTVPLQIIEFFLILSAIAAVSATLFWRLLIASVVMLVAGYLGEVEQGSMLWPMFILGMLAWIYIIYEIFAGEASKINENSGTVASKKAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACAGTCCCACTTCAAATCATTGAATTCTTCCTGATCCTGTCAGCA---------ATT---GCTGCCGTCAGTGCG---ACGTTG------------------------------------TTCTGGCGT---TTGCTTATTGCATCAGTGGTAATGCTGGTAGCCGGATACCTTGGCGAG---------GTC------------------GAA------CAG---------------------------------GGC---------------------------------------------------------------------------------AGTATGCTCTGGCCCATG---TTCATTTTGGGCATGCTTGCATGGATTTACATCATCTATGAAATC---------------TTC------GCT---GGTGAAGCGAGTAAGATCAACGAAAAC------TCT---GGAACGGTAGCATCA---AAG---AAG---GCG---TTT---CAT---GCGCTT---CGCCTCATCGTTACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AAVSA-TL------------FWR-LLIASVVMLVAGYLGE---V------E--Q-----------G---------------------------SMLWPM-FILGMLAWIYIIYEI-----F--A-GEASKINEN--S-GTVAS-K-K-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927791 [unk-Proteo2-a] PRGD_OTU017_17319a80755b7114b3905580ab8fc821 gb|KJ927791| PRGD_OTU017_17319a80755b7114b3905580ab8fc821, putative proteorhodopsin gene, partial cds. PRGD_OTU017_17319a80755b7114b3905580ab8fc821, putative proteorhodopsin gene, partial cds. KJ927791 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTCTTAACTGTGCCACTCCAAATCATCGAATTCTTCCTGATCCTGTCAGCAATCGCTGTAGTCAGTACAACATTGTTCTGGCGCTTACTCATCGCATCAGTGGTCATGCTGGTCGCCGGATATCTCGGCGAGGTCGAACAAGGCGGCATGCTATGGCCGATGTTCATTGTGGGCTTGCTTGCCTGGATTTACATCATCTATGAAATCTTCGCGGGTGAAGCTAGTAAGATCAACGAAAACTCTGGAACGGTAGCATCAAAGAAGGCGTTTCATGCGCTTCGCCTCATCGTTACTGTC LLTVPLQIIEFFLILSAIAVVSTTLFWRLLIASVVMLVAGYLGEVEQGGMLWPMFIVGLLAWIYIIYEIFAGEASKINENSGTVASKKAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACTGTGCCACTCCAAATCATCGAATTCTTCCTGATCCTGTCAGCA---------ATC---GCTGTAGTCAGTACA---ACATTG------------------------------------TTCTGGCGC---TTACTCATCGCATCAGTGGTCATGCTGGTCGCCGGATATCTCGGCGAG---------GTC------------------GAA------CAA---------------------------------GGC---------------------------------------------------------------------------------GGCATGCTATGGCCGATG---TTCATTGTGGGCTTGCTTGCCTGGATTTACATCATCTATGAAATC---------------TTC------GCG---GGTGAAGCTAGTAAGATCAACGAAAAC------TCT---GGAACGGTAGCATCA---AAG---AAG---GCG---TTT---CAT---GCGCTT---CGCCTCATCGTTACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVST-TL------------FWR-LLIASVVMLVAGYLGE---V------E--Q-----------G---------------------------GMLWPM-FIVGLLAWIYIIYEI-----F--A-GEASKINEN--S-GTVAS-K-K-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927788 [unk-Proteo2-a] PRGD_OTU017_0c04017022e48f9cadfcf2765ac2901b gb|KJ927788| PRGD_OTU017_0c04017022e48f9cadfcf2765ac2901b, putative proteorhodopsin gene, partial cds. PRGD_OTU017_0c04017022e48f9cadfcf2765ac2901b, putative proteorhodopsin gene, partial cds. KJ927788 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCTTAACTGTGCCGCTCCAAATAATCGAATTCTTCCTGATCCTGTCAGCAATCGCTGTAGTCAGTACGACATTGTTCTGGCGCTTGCTCATCGCATCAGTGGTCATGCTGGTCGCCGGATATCTCGGCGAGGTCGAACAAGGCGGCATGCTCTGGCCGATGTTCATGCTGGGCTTGCTTGCCTGGATTTATATCATCTATGAAATCTTCGCGGGTGAAGCGAGTAAGATCAACGAAAACTCTGGAACCGTAGCATCAAAGAAGGCGTTTCATGCGCTTCGCCTCATCGTTACTGTC LLTVPLQIIEFFLILSAIAVVSTTLFWRLLIASVVMLVAGYLGEVEQGGMLWPMFMLGLLAWIYIIYEIFAGEASKINENSGTVASKKAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACTGTGCCGCTCCAAATAATCGAATTCTTCCTGATCCTGTCAGCA---------ATC---GCTGTAGTCAGTACG---ACATTG------------------------------------TTCTGGCGC---TTGCTCATCGCATCAGTGGTCATGCTGGTCGCCGGATATCTCGGCGAG---------GTC------------------GAA------CAA---------------------------------GGC---------------------------------------------------------------------------------GGCATGCTCTGGCCGATG---TTCATGCTGGGCTTGCTTGCCTGGATTTATATCATCTATGAAATC---------------TTC------GCG---GGTGAAGCGAGTAAGATCAACGAAAAC------TCT---GGAACCGTAGCATCA---AAG---AAG---GCG---TTT---CAT---GCGCTT---CGCCTCATCGTTACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVST-TL------------FWR-LLIASVVMLVAGYLGE---V------E--Q-----------G---------------------------GMLWPM-FMLGLLAWIYIIYEI-----F--A-GEASKINEN--S-GTVAS-K-K-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927832 [unk-Proteo2-a] PRGD_OTU017_eca68b4ee1f22460f5de34fecedbbdfe gb|KJ927832| PRGD_OTU017_eca68b4ee1f22460f5de34fecedbbdfe, putative proteorhodopsin gene, partial cds. PRGD_OTU017_eca68b4ee1f22460f5de34fecedbbdfe, putative proteorhodopsin gene, partial cds. KJ927832 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) CTCTTAACTGTGCCACTCCAAATCATCGAATTCTTCCTGATCCTGTCAGCAATCGCTGTAGTCAGCACGACATTGTTCTGGCGCTTGCTCATCGCATCAGTGGTCATGCTGGTCGCCGGATACCTCGGCGAGGTCGAACAAGGCGGCATGCTCTGGCCGATGTTCATCCTGGGCTTGCTTGCTTGGATTTATATCATCTACGAAATTTTCGCGGGTGAAGCGAGCAAGATCAACGCCAACTCCGGAACAGTGGCATCGAAGAAAGCGTTTCATGCGCTTCGACTCATTGTAACGGTC LLTVPLQIIEFFLILSAIAVVSTTLFWRLLIASVVMLVAGYLGEVEQGGMLWPMFILGLLAWIYIIYEIFAGEASKINANSGTVASKKAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACTGTGCCACTCCAAATCATCGAATTCTTCCTGATCCTGTCAGCA---------ATC---GCTGTAGTCAGCACG---ACATTG------------------------------------TTCTGGCGC---TTGCTCATCGCATCAGTGGTCATGCTGGTCGCCGGATACCTCGGCGAG---------GTC------------------GAA------CAA---------------------------------GGC---------------------------------------------------------------------------------GGCATGCTCTGGCCGATG---TTCATCCTGGGCTTGCTTGCTTGGATTTATATCATCTACGAAATT---------------TTC------GCG---GGTGAAGCGAGCAAGATCAACGCCAAC------TCC---GGAACAGTGGCATCG---AAG---AAA---GCG---TTT---CAT---GCGCTT---CGACTCATTGTAACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVST-TL------------FWR-LLIASVVMLVAGYLGE---V------E--Q-----------G---------------------------GMLWPM-FILGLLAWIYIIYEI-----F--A-GEASKINAN--S-GTVAS-K-K-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927803 [unk-Proteo2-a] PRGD_OTU017_4a35fe6044bec06b44d3f41432f88aa9 gb|KJ927803| PRGD_OTU017_4a35fe6044bec06b44d3f41432f88aa9, putative proteorhodopsin gene, partial cds. PRGD_OTU017_4a35fe6044bec06b44d3f41432f88aa9, putative proteorhodopsin gene, partial cds. KJ927803 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCCTAACCGTGCCACTCCAGATCATCGAATTCTTCCTGATTCTGTCAGCAATCGCAGTGGTCAGTGCAACATTGTTCTGGCGCTTGCTGATCGCATCAGTCGTCATGCTGGTCGCCGGATACCTCGGCGAGGTCGAACAAGGCGGCATGCTGTGGCCGATGTTCATCCTCGGTATGCTTGCTTGGATTTACATCATCTACGAAATTTTTGCAGGTGAAGCGAGCAAGATAAACGCTAATTCCGGAACAGTGGCATCAAAGAAAGCGTTTCATGCGCTTCGACTCATTGTAACTGTC LLTVPLQIIEFFLILSAIAVVSATLFWRLLIASVVMLVAGYLGEVEQGGMLWPMFILGMLAWIYIIYEIFAGEASKINANSGTVASKKAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTAACCGTGCCACTCCAGATCATCGAATTCTTCCTGATTCTGTCAGCA---------ATC---GCAGTGGTCAGTGCA---ACATTG------------------------------------TTCTGGCGC---TTGCTGATCGCATCAGTCGTCATGCTGGTCGCCGGATACCTCGGCGAG---------GTC------------------GAA------CAA---------------------------------GGC---------------------------------------------------------------------------------GGCATGCTGTGGCCGATG---TTCATCCTCGGTATGCTTGCTTGGATTTACATCATCTACGAAATT---------------TTT------GCA---GGTGAAGCGAGCAAGATAAACGCTAAT------TCC---GGAACAGTGGCATCA---AAG---AAA---GCG---TTT---CAT---GCGCTT---CGACTCATTGTAACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVSA-TL------------FWR-LLIASVVMLVAGYLGE---V------E--Q-----------G---------------------------GMLWPM-FILGMLAWIYIIYEI-----F--A-GEASKINAN--S-GTVAS-K-K-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927818 [unk-Proteo2-a] PRGD_OTU017_9b0639ef57c3eff0eff9f19c3ca24996 gb|KJ927818| PRGD_OTU017_9b0639ef57c3eff0eff9f19c3ca24996, putative proteorhodopsin gene, partial cds. PRGD_OTU017_9b0639ef57c3eff0eff9f19c3ca24996, putative proteorhodopsin gene, partial cds. KJ927818 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCTTAACCGTGCCACTCCAAATCATCGAATTCTTCCTGATACTGTCAGCAATCGCAGTGGTCAGTGCGACATTGTTCTGGCGTTTGCTCATCGCATCAGTAGTCATGTTGGTCGCTGGATACCTCGGCGAGGTGGAACAAGGGGGTATGCTGTGGCCGATGTTCATCCTGGGTATGCTTGCTTGGATTTACATCATCTACGAAATTTTCGCGGGTGAAGCGAGCAAGATAAACGCGAGCTCCGGAACAGTGGCATCGAAGAAAGCGTTTCATGCGCTTCGACTCATTGTAACGGTC LLTVPLQIIEFFLILSAIAVVSATLFWRLLIASVVMLVAGYLGEVEQGGMLWPMFILGMLAWIYIIYEIFAGEASKINASSGTVASKKAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACCGTGCCACTCCAAATCATCGAATTCTTCCTGATACTGTCAGCA---------ATC---GCAGTGGTCAGTGCG---ACATTG------------------------------------TTCTGGCGT---TTGCTCATCGCATCAGTAGTCATGTTGGTCGCTGGATACCTCGGCGAG---------GTG------------------GAA------CAA---------------------------------GGG---------------------------------------------------------------------------------GGTATGCTGTGGCCGATG---TTCATCCTGGGTATGCTTGCTTGGATTTACATCATCTACGAAATT---------------TTC------GCG---GGTGAAGCGAGCAAGATAAACGCGAGC------TCC---GGAACAGTGGCATCG---AAG---AAA---GCG---TTT---CAT---GCGCTT---CGACTCATTGTAACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVSA-TL------------FWR-LLIASVVMLVAGYLGE---V------E--Q-----------G---------------------------GMLWPM-FILGMLAWIYIIYEI-----F--A-GEASKINAS--S-GTVAS-K-K-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927800 [unk-Proteo2-a] PRGD_OTU017_410bde7239c1b2cc1cefa2e499b117c1 gb|KJ927800| PRGD_OTU017_410bde7239c1b2cc1cefa2e499b117c1, putative proteorhodopsin gene, partial cds. PRGD_OTU017_410bde7239c1b2cc1cefa2e499b117c1, putative proteorhodopsin gene, partial cds. KJ927800 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) CTATTAACCGTGCCACTTCAAATCATCGAATTCTTCCTGATCCTGTCAGCGATAGCTGTGGTCAGTGCTACATTGTTCTGGCGCTTGCTTATTGCATCGGTGGTCATGCTGGTCGCCGGATACCTTGGTGAGGTCGAACAGGGGGGCATGCTTTGGCCGATGTTCATCTTGGGGATGCTTGCTTGGATCTACATCATCTACGAAATTTTCGCGGGTGAAGCGAGTAAGATCAATGCAAGCTCCGGAACAGTGGCGTCAAAGAAAGCGTTCCATGCACTTCGGTTAATCGTTACCGTC LLTVPLQIIEFFLILSAIAVVSATLFWRLLIASVVMLVAGYLGEVEQGGMLWPMFILGMLAWIYIIYEIFAGEASKINASSGTVASKKAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACCGTGCCACTTCAAATCATCGAATTCTTCCTGATCCTGTCAGCG---------ATA---GCTGTGGTCAGTGCT---ACATTG------------------------------------TTCTGGCGC---TTGCTTATTGCATCGGTGGTCATGCTGGTCGCCGGATACCTTGGTGAG---------GTC------------------GAA------CAG---------------------------------GGG---------------------------------------------------------------------------------GGCATGCTTTGGCCGATG---TTCATCTTGGGGATGCTTGCTTGGATCTACATCATCTACGAAATT---------------TTC------GCG---GGTGAAGCGAGTAAGATCAATGCAAGC------TCC---GGAACAGTGGCGTCA---AAG---AAA---GCG---TTC---CAT---GCACTT---CGGTTAATCGTTACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVSA-TL------------FWR-LLIASVVMLVAGYLGE---V------E--Q-----------G---------------------------GMLWPM-FILGMLAWIYIIYEI-----F--A-GEASKINAS--S-GTVAS-K-K-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927828 [unk-Proteo2-a] PRGD_OTU017_b81241b2a9d20feea2f03f8d4f090a9b gb|KJ927828| PRGD_OTU017_b81241b2a9d20feea2f03f8d4f090a9b, putative proteorhodopsin gene, partial cds. PRGD_OTU017_b81241b2a9d20feea2f03f8d4f090a9b, putative proteorhodopsin gene, partial cds. KJ927828 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTATTAACCGTGCCACTTCAAATCATCGAATTCTTCCTGATCCTGTCAGCGATAGCTGTGGTCAGTGCTACATTGTTCTGGCGCTTGCTTATTGCATCGGTGGTCATGCTGGTCGCCGGATACCTTGGTGAGGTCGAACAGGGGGGCATGCTTTGGCCGATGTTCATCTTGGGGATGCTTGCTTGGATCTACATCATCTACGAAATTTTCGCGGGTGAAGCGAGTAAGATCAATGCAAGCTCCGGAACAGTAGCGTCAAAGAAAGCGTTCCATGCACTAAGGCTTATCGTAACTGTC LLTVPLQIIEFFLILSAIAVVSATLFWRLLIASVVMLVAGYLGEVEQGGMLWPMFILGMLAWIYIIYEIFAGEASKINASSGTVASKKAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACCGTGCCACTTCAAATCATCGAATTCTTCCTGATCCTGTCAGCG---------ATA---GCTGTGGTCAGTGCT---ACATTG------------------------------------TTCTGGCGC---TTGCTTATTGCATCGGTGGTCATGCTGGTCGCCGGATACCTTGGTGAG---------GTC------------------GAA------CAG---------------------------------GGG---------------------------------------------------------------------------------GGCATGCTTTGGCCGATG---TTCATCTTGGGGATGCTTGCTTGGATCTACATCATCTACGAAATT---------------TTC------GCG---GGTGAAGCGAGTAAGATCAATGCAAGC------TCC---GGAACAGTAGCGTCA---AAG---AAA---GCG---TTC---CAT---GCACTA---AGGCTTATCGTAACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVSA-TL------------FWR-LLIASVVMLVAGYLGE---V------E--Q-----------G---------------------------GMLWPM-FILGMLAWIYIIYEI-----F--A-GEASKINAS--S-GTVAS-K-K-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927812 [unk-Proteo2-a] PRGD_OTU017_81488921d8952073bbb0e28987d29bd2 gb|KJ927812| PRGD_OTU017_81488921d8952073bbb0e28987d29bd2, putative proteorhodopsin gene, partial cds. PRGD_OTU017_81488921d8952073bbb0e28987d29bd2, putative proteorhodopsin gene, partial cds. KJ927812 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTGTTAACCGTACCACTTCAAATCATCGAATTCTTCCTGATCCTGTCAGCAATAGCTGTGGTCAGTGCTACATTGTTCTGGCGCTTGCTTATCGCATCAGTGGTAATGCTGGTCGCCGGGTACCTTGGTGAGGTCGAACAAGGGGGTATGCTCTGGCCGATGTTCATCTTGGGAATGCTTGCTTGGATCTACATCATCTACGAAATTTTCGCGGGTGAAGCGAGTAAGATCAATGCAAGCTCCGGAACAGTGGCGTCAAAGAAAGCGTTTCATGCACTGAGACTTATCGTAACCGTC LLTVPLQIIEFFLILSAIAVVSATLFWRLLIASVVMLVAGYLGEVEQGGMLWPMFILGMLAWIYIIYEIFAGEASKINASSGTVASKKAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACCGTACCACTTCAAATCATCGAATTCTTCCTGATCCTGTCAGCA---------ATA---GCTGTGGTCAGTGCT---ACATTG------------------------------------TTCTGGCGC---TTGCTTATCGCATCAGTGGTAATGCTGGTCGCCGGGTACCTTGGTGAG---------GTC------------------GAA------CAA---------------------------------GGG---------------------------------------------------------------------------------GGTATGCTCTGGCCGATG---TTCATCTTGGGAATGCTTGCTTGGATCTACATCATCTACGAAATT---------------TTC------GCG---GGTGAAGCGAGTAAGATCAATGCAAGC------TCC---GGAACAGTGGCGTCA---AAG---AAA---GCG---TTT---CAT---GCACTG---AGACTTATCGTAACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVSA-TL------------FWR-LLIASVVMLVAGYLGE---V------E--Q-----------G---------------------------GMLWPM-FILGMLAWIYIIYEI-----F--A-GEASKINAS--S-GTVAS-K-K-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927807 [unk-Proteo2-a] PRGD_OTU017_65b8557d275b4fd3499d7e55fcf0b78b gb|KJ927807| PRGD_OTU017_65b8557d275b4fd3499d7e55fcf0b78b, putative proteorhodopsin gene, partial cds. PRGD_OTU017_65b8557d275b4fd3499d7e55fcf0b78b, putative proteorhodopsin gene, partial cds. KJ927807 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCTTAACCGTGCCACTTCAAATAATCGAATTTTTCCTTATTCTATCAGCAATTGCTGTTGTTAGTGCGACATTATTTTGGCGCTTACTCATTGCATCGGTGGTCATGCTGGTTGCCGGATACCTTGGCGAAGTAGAACAAGGCGGTATGCTATGGCCGATGTTCATCTTGGGTCTGCTAGCGTGGATTTATATCATCTACGAAGTATTCGCGGGCGAAGCCAGTAAGATCAACGCAAGCTCTGGAACAGTGGCGTCAAAGAAAGCATTCCATGCGCTTCGGCTTATTGTAACCGTC LLTVPLQIIEFFLILSAIAVVSATLFWRLLIASVVMLVAGYLGEVEQGGMLWPMFILGLLAWIYIIYEVFAGEASKINASSGTVASKKAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACCGTGCCACTTCAAATAATCGAATTTTTCCTTATTCTATCAGCA---------ATT---GCTGTTGTTAGTGCG---ACATTA------------------------------------TTTTGGCGC---TTACTCATTGCATCGGTGGTCATGCTGGTTGCCGGATACCTTGGCGAA---------GTA------------------GAA------CAA---------------------------------GGC---------------------------------------------------------------------------------GGTATGCTATGGCCGATG---TTCATCTTGGGTCTGCTAGCGTGGATTTATATCATCTACGAAGTA---------------TTC------GCG---GGCGAAGCCAGTAAGATCAACGCAAGC------TCT---GGAACAGTGGCGTCA---AAG---AAA---GCA---TTC---CAT---GCGCTT---CGGCTTATTGTAACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVSA-TL------------FWR-LLIASVVMLVAGYLGE---V------E--Q-----------G---------------------------GMLWPM-FILGLLAWIYIIYEV-----F--A-GEASKINAS--S-GTVAS-K-K-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927820 [unk-Proteo2-a] PRGD_OTU017_9ea0406e6d544f174e16e092d4f73a94 gb|KJ927820| PRGD_OTU017_9ea0406e6d544f174e16e092d4f73a94, putative proteorhodopsin gene, partial cds. PRGD_OTU017_9ea0406e6d544f174e16e092d4f73a94, putative proteorhodopsin gene, partial cds. KJ927820 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTCCTAACTGTGCCACTGCAAATTATCGAGTTCTTCTTAATATTGTCTGCAATCGCTGTGGTCAGTGCGTCATTGTTCTGGCGCTTGCTCATCGCATCAGTAGTGATGCTGGTTGCTGGATATCTCGGGGAAGTTGAACAAGGCGGCATGCTTTGGCCGATGTTCATTCTGGGTATGCTTGCGTGGATTTACATTATCTATGAAATCTTCGCGGGCGAAGCCAGCAAGATTAACGCAAACTCCGGAACAGTGGCTTCAAAGAAAGCGTTTAGTGCGCTACGGCTTATTGTAACCGTT LLTVPLQIIEFFLILSAIAVVSASLFWRLLIASVVMLVAGYLGEVEQGGMLWPMFILGMLAWIYIIYEIFAGEASKINANSGTVASKKAFSALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTAACTGTGCCACTGCAAATTATCGAGTTCTTCTTAATATTGTCTGCA---------ATC---GCTGTGGTCAGTGCG---TCATTG------------------------------------TTCTGGCGC---TTGCTCATCGCATCAGTAGTGATGCTGGTTGCTGGATATCTCGGGGAA---------GTT------------------GAA------CAA---------------------------------GGC---------------------------------------------------------------------------------GGCATGCTTTGGCCGATG---TTCATTCTGGGTATGCTTGCGTGGATTTACATTATCTATGAAATC---------------TTC------GCG---GGCGAAGCCAGCAAGATTAACGCAAAC------TCC---GGAACAGTGGCTTCA---AAG---AAA---GCG---TTT---AGT---GCGCTA---CGGCTTATTGTAACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVSA-SL------------FWR-LLIASVVMLVAGYLGE---V------E--Q-----------G---------------------------GMLWPM-FILGMLAWIYIIYEI-----F--A-GEASKINAN--S-GTVAS-K-K-A-F-S-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927799 [unk-Proteo2-a] PRGD_OTU017_3e47c73590f82ba505702f214b8d2ced gb|KJ927799| PRGD_OTU017_3e47c73590f82ba505702f214b8d2ced, putative proteorhodopsin gene, partial cds. PRGD_OTU017_3e47c73590f82ba505702f214b8d2ced, putative proteorhodopsin gene, partial cds. KJ927799 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683) CTTCTAACTGTGCCACTTCAAATTATCGAATTCTTCCTGATCTTGTCAGCCATTGCAGTAGTCGGCGCTTCATTGTTCTGGCGCTTACTCATCGCTTCGGTAGTCATGCTGGTCGCAGGATATCTTGGTGAGGTCGAACAAGGTGGAATGCTCTGGCCGATGTTCATATTAGGCATGCTTGCTTGGATTTATATCATCTACGAAGTATTCGCGGGTGAGGCGAGTAAGATCAATGCAAGCTCCGGAACCGTGGCATCGAAGAAAGCGTTTAGTGCGCTTCGACTCATCGTGACCGTT LLTVPLQIIEFFLILSAIAVVGASLFWRLLIASVVMLVAGYLGEVEQGGMLWPMFILGMLAWIYIIYEVFAGEASKINASSGTVASKKAFSALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTAACTGTGCCACTTCAAATTATCGAATTCTTCCTGATCTTGTCAGCC---------ATT---GCAGTAGTCGGCGCT---TCATTG------------------------------------TTCTGGCGC---TTACTCATCGCTTCGGTAGTCATGCTGGTCGCAGGATATCTTGGTGAG---------GTC------------------GAA------CAA---------------------------------GGT---------------------------------------------------------------------------------GGAATGCTCTGGCCGATG---TTCATATTAGGCATGCTTGCTTGGATTTATATCATCTACGAAGTA---------------TTC------GCG---GGTGAGGCGAGTAAGATCAATGCAAGC------TCC---GGAACCGTGGCATCG---AAG---AAA---GCG---TTT---AGT---GCGCTT---CGACTCATCGTGACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVGA-SL------------FWR-LLIASVVMLVAGYLGE---V------E--Q-----------G---------------------------GMLWPM-FILGMLAWIYIIYEV-----F--A-GEASKINAS--S-GTVAS-K-K-A-F-S-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ927829 [unk-Proteo2-a] PRGD_OTU017_ce474ec5f2caddfd2bd11787c5a28c4f gb|KJ927829| PRGD_OTU017_ce474ec5f2caddfd2bd11787c5a28c4f, putative proteorhodopsin gene, partial cds. PRGD_OTU017_ce474ec5f2caddfd2bd11787c5a28c4f, putative proteorhodopsin gene, partial cds. KJ927829 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-33.28, 45.35) CTTCTAACTGTGCCACTTCAAATTATCGAATTCTTCCTGATCTTGTCAGCGATTGCAGTAGTTGGTGCTTCATTGTTCTGGCGCTTACTCATCGCTTCGGTAGTCATGCTGGTCGCAGGATATCTTGGTGAGGTCGAACAAGGTGGAATGCTCTGGCCGATGTTTATATTGGGCTTACTTGCATGGATTTATATCATCTACGAAGTTTTCGCGGGTGAGGCGAGTAAGATCAATGCAAGCTCCGGAACCGTGGCATCGAAGAAAGCGTTTAGTGCGCTTCGACTCATCGTGACCGTC LLTVPLQIIEFFLILSAIAVVGASLFWRLLIASVVMLVAGYLGEVEQGGMLWPMFILGLLAWIYIIYEVFAGEASKINASSGTVASKKAFSALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTAACTGTGCCACTTCAAATTATCGAATTCTTCCTGATCTTGTCAGCG---------ATT---GCAGTAGTTGGTGCT---TCATTG------------------------------------TTCTGGCGC---TTACTCATCGCTTCGGTAGTCATGCTGGTCGCAGGATATCTTGGTGAG---------GTC------------------GAA------CAA---------------------------------GGT---------------------------------------------------------------------------------GGAATGCTCTGGCCGATG---TTTATATTGGGCTTACTTGCATGGATTTATATCATCTACGAAGTT---------------TTC------GCG---GGTGAGGCGAGTAAGATCAATGCAAGC------TCC---GGAACCGTGGCATCG---AAG---AAA---GCG---TTT---AGT---GCGCTT---CGACTCATCGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVGA-SL------------FWR-LLIASVVMLVAGYLGE---V------E--Q-----------G---------------------------GMLWPM-FILGLLAWIYIIYEV-----F--A-GEASKINAS--S-GTVAS-K-K-A-F-S-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ929635 [unk-Proteo2-a] PRGD_OTU177_otuREP_5b3810fdd7b51759cc0959fafe30f86c gb|KJ929635| PRGD_OTU177_otuREP_5b3810fdd7b51759cc0959fafe30f86c, putative proteorhodopsin gene, partial cds. PRGD_OTU177_otuREP_5b3810fdd7b51759cc0959fafe30f86c, putative proteorhodopsin gene, partial cds. KJ929635 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (70.9139, -128.9264; ; ; 67.49, -168.12), Mediterranean Sea (33.762, 29.175), Indian Ocean (-33.28, 45.35) CTGCTTACAGTTCCACTTCAAATTATTGAGTTCTTCTTAATTCTTTCCGCGATTGCTGTGGTTCGCGCTGCACTCTTCTGGAAACTTCTGGTCGCATCACTGGTTATGCTGGTGACCGGCTATCTCGGTGAAGTTGAACAGGGTTCGCTGCTCTGGCCGATGTTCATTATCGGTTGTCTGGCCTGGTTCTACATCATTTATGAAATCTTTGCCGGTGAGGCGAGCCAGATTAATGCGAACGAAGGCACAGAAGCATCAAAGAAAGCTTTCGGCGCTCTTCGTCTGATTGTGACGATT LLTVPLQIIEFFLILSAIAVVRAALFWKLLVASLVMLVTGYLGEVEQGSLLWPMFIIGCLAWFYIIYEIFAGEASQINANEGTEASKKAFGALRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTTACAGTTCCACTTCAAATTATTGAGTTCTTCTTAATTCTTTCCGCG---------ATT---GCTGTGGTTCGCGCT---GCACTC------------------------------------TTCTGGAAA---CTTCTGGTCGCATCACTGGTTATGCTGGTGACCGGCTATCTCGGTGAA---------GTT------------------GAA------CAG---------------------------------GGT---------------------------------------------------------------------------------TCGCTGCTCTGGCCGATG---TTCATTATCGGTTGTCTGGCCTGGTTCTACATCATTTATGAAATC---------------TTT------GCC---GGTGAGGCGAGCCAGATTAATGCGAAC------GAA---GGCACAGAAGCATCA---AAG---AAA---GCT---TTC---GGC---GCTCTT---CGTCTGATTGTGACGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVRA-AL------------FWK-LLVASLVMLVTGYLGE---V------E--Q-----------G---------------------------SLLWPM-FIIGCLAWFYIIYEI-----F--A-GEASQINAN--E-GTEAS-K-K-A-F-G-AL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ929636 [unk-Proteo2-a] PRGD_OTU177_a38967cdde592d7512e480837a795a21 gb|KJ929636| PRGD_OTU177_a38967cdde592d7512e480837a795a21, putative proteorhodopsin gene, partial cds. PRGD_OTU177_a38967cdde592d7512e480837a795a21, putative proteorhodopsin gene, partial cds. KJ929636 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-33.28, 45.35) TTACTCACTGTACCGCTACAGATCATTGAGTTCTTCCTTATTCTTTCTGCGATTGCAGTGGTACGTGCCGCACTATTTTGGAAACTGTTAGTTGCTTCGCTAGTCATGTTGATCGCAGGCTACATTGGCGAGGTCGAGCAAGGTGGACTTCTATGGCCGATGTTTATTATCGGACTACTAGCTTGGTTTTACATTATTTACGAAATATTCGTGGGTGAAGCCAGCAAGATTAATGCCAGCAAAGGTACCGTTGCATCCAAGAAAGCATTTAATGCTCTTCGCCTGATTGTGACAATT LLTVPLQIIEFFLILSAIAVVRAALFWKLLVASLVMLIAGYIGEVEQGGLLWPMFIIGLLAWFYIIYEIFVGEASKINASKGTVASKKAFNALRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTCACTGTACCGCTACAGATCATTGAGTTCTTCCTTATTCTTTCTGCG---------ATT---GCAGTGGTACGTGCC---GCACTA------------------------------------TTTTGGAAA---CTGTTAGTTGCTTCGCTAGTCATGTTGATCGCAGGCTACATTGGCGAG---------GTC------------------GAG------CAA---------------------------------GGT---------------------------------------------------------------------------------GGACTTCTATGGCCGATG---TTTATTATCGGACTACTAGCTTGGTTTTACATTATTTACGAAATA---------------TTC------GTG---GGTGAAGCCAGCAAGATTAATGCCAGC------AAA---GGTACCGTTGCATCC---AAG---AAA---GCA---TTT---AAT---GCTCTT---CGCCTGATTGTGACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVRA-AL------------FWK-LLVASLVMLIAGYIGE---V------E--Q-----------G---------------------------GLLWPM-FIIGLLAWFYIIYEI-----F--V-GEASKINAS--K-GTVAS-K-K-A-F-N-AL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ929637 [unk-Proteo2-a] PRGD_OTU177_ef0c7cab771821e4989f8319a439f97e gb|KJ929637| PRGD_OTU177_ef0c7cab771821e4989f8319a439f97e, putative proteorhodopsin gene, partial cds. PRGD_OTU177_ef0c7cab771821e4989f8319a439f97e, putative proteorhodopsin gene, partial cds. KJ929637 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTACTCACCGTACCGCTACAAATCATTGAGTTCTTCCTTATTCTTTCTGCAATTGCAGTGGTACGTGCTGCACTATTCTGGAAACTGTTAGTTGCTTCAGTAGTCATGTTAATCGCGGGCTACATTGGCGAGGTAGAGCAAGGTGGACTTCTATGGCCGATGTTTATTATCGGACTACTAGCTTGGTTTTACATTATTTACGAAATATTCGTGGGTGAAGCTAGCAAGATTAATGCCAGCAAAGGTACCGTTGCATCCAAGAAAGCATTTAATGCTCTTCGCCTGATTGTGACAATT LLTVPLQIIEFFLILSAIAVVRAALFWKLLVASVVMLIAGYIGEVEQGGLLWPMFIIGLLAWFYIIYEIFVGEASKINASKGTVASKKAFNALRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTCACCGTACCGCTACAAATCATTGAGTTCTTCCTTATTCTTTCTGCA---------ATT---GCAGTGGTACGTGCT---GCACTA------------------------------------TTCTGGAAA---CTGTTAGTTGCTTCAGTAGTCATGTTAATCGCGGGCTACATTGGCGAG---------GTA------------------GAG------CAA---------------------------------GGT---------------------------------------------------------------------------------GGACTTCTATGGCCGATG---TTTATTATCGGACTACTAGCTTGGTTTTACATTATTTACGAAATA---------------TTC------GTG---GGTGAAGCTAGCAAGATTAATGCCAGC------AAA---GGTACCGTTGCATCC---AAG---AAA---GCA---TTT---AAT---GCTCTT---CGCCTGATTGTGACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILSA---I-AVVRA-AL------------FWK-LLVASVVMLIAGYIGE---V------E--Q-----------G---------------------------GLLWPM-FIIGLLAWFYIIYEI-----F--V-GEASKINAS--K-GTVAS-K-K-A-F-N-AL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ928083 [unk-Proteo2-a] PRGD_OTU024_02acc203415d4446bcbfd08ba96cb90e gb|KJ928083| PRGD_OTU024_02acc203415d4446bcbfd08ba96cb90e, putative proteorhodopsin gene, partial cds. PRGD_OTU024_02acc203415d4446bcbfd08ba96cb90e, putative proteorhodopsin gene, partial cds. KJ928083 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.935 18.508 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (33.762, 29.175; 33.935, 18.508) CTGCTGACGGTGCCCCTGCAGATCGTCGAATTCTACCTTATCTTGGCGGCGATGACTGCAGTCGCTACAGGGCTATTCTGGCGTTTGTTGATCGCCTCTCTGGTGATGTTGATCGCCGGTTATCTTGGCGAAGTGAATGCCGGGAATGCTACTGCGCTCTGGGTACTGTTTATTATCGGTATGGCTGGATGGATTTACATCATCTACGAGGTTTTCGCCGGTGAAGCCAGCCGCATCAATGCTAGCGAAGGCACCGTTGCCGGACAGAAAGCGTTTAACGCGCTGCGCCTGATAGTCACCGTC LLTVPLQIVEFYLILAAMTAVATGLFWRLLIASLVMLIAGYLGEVNAGNATALWVLFIIGMAGWIYIIYEVFAGEASRINASEGTVAGQKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTGACGGTGCCCCTGCAGATCGTCGAATTCTACCTTATCTTGGCGGCG---------ATG---ACTGCAGTCGCTACA---GGGCTA------------------------------------TTCTGGCGT---TTGTTGATCGCCTCTCTGGTGATGTTGATCGCCGGTTATCTTGGCGAA---------GTG------------------AAT------GCC---------------------------------GGG------------------------------------------------------------------AATGCT---------ACTGCGCTCTGGGTACTG---TTTATTATCGGTATGGCTGGATGGATTTACATCATCTACGAGGTT---------------TTC------GCC---GGTGAAGCCAGCCGCATCAATGCTAGC------GAA---GGCACCGTTGCCGGA---CAG---AAA---GCG---TTT---AAC---GCGCTG---CGCCTGATAGTCACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---M-TAVAT-GL------------FWR-LLIASLVMLIAGYLGE---V------N--A-----------G----------------------NA---TALWVL-FIIGMAGWIYIIYEV-----F--A-GEASRINAS--E-GTVAG-Q-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ928095 [unk-Proteo2-a] PRGD_OTU024_3853ec6848241ff4646d4929dae2b813 gb|KJ928095| PRGD_OTU024_3853ec6848241ff4646d4929dae2b813, putative proteorhodopsin gene, partial cds. PRGD_OTU024_3853ec6848241ff4646d4929dae2b813, putative proteorhodopsin gene, partial cds. KJ928095 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGCTGACGGTGCCCCTGCAGATCGTCGAATTCTACCTTATCTTGGCGGCGATGACTGCAGTCGCTACAGGGCTATTCTGGCGTTTGTTGATCGCCTCTCTGGTGATGTTGATCGCCGGTTATCTTGGCGAAGTTAATGCCGGGAATGCGACTGCGCTCTGGGTGCTGTTTATTATCGGTATGGCTGGATGGATTTACATCATCTACGAGGTTTTTGCCGGTGAAGCCAGCCGCATTAATGCTAGCGAAGGCACCGTTGCTGGTCAGAAAGCGTTTAACGCGCTGCGCCTGATCGTTACCGTG LLTVPLQIVEFYLILAAMTAVATGLFWRLLIASLVMLIAGYLGEVNAGNATALWVLFIIGMAGWIYIIYEVFAGEASRINASEGTVAGQKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTGACGGTGCCCCTGCAGATCGTCGAATTCTACCTTATCTTGGCGGCG---------ATG---ACTGCAGTCGCTACA---GGGCTA------------------------------------TTCTGGCGT---TTGTTGATCGCCTCTCTGGTGATGTTGATCGCCGGTTATCTTGGCGAA---------GTT------------------AAT------GCC---------------------------------GGG------------------------------------------------------------------AATGCG---------ACTGCGCTCTGGGTGCTG---TTTATTATCGGTATGGCTGGATGGATTTACATCATCTACGAGGTT---------------TTT------GCC---GGTGAAGCCAGCCGCATTAATGCTAGC------GAA---GGCACCGTTGCTGGT---CAG---AAA---GCG---TTT---AAC---GCGCTG---CGCCTGATCGTTACCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---M-TAVAT-GL------------FWR-LLIASLVMLIAGYLGE---V------N--A-----------G----------------------NA---TALWVL-FIIGMAGWIYIIYEV-----F--A-GEASRINAS--E-GTVAG-Q-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ928094 [unk-Proteo2-a] PRGD_OTU024_37d35b7b540e01dd359de57d8877d76b gb|KJ928094| PRGD_OTU024_37d35b7b540e01dd359de57d8877d76b, putative proteorhodopsin gene, partial cds. PRGD_OTU024_37d35b7b540e01dd359de57d8877d76b, putative proteorhodopsin gene, partial cds. KJ928094 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGCTGACGGTGCCCCTGCAGATCGTCGAATTCTACCTTATCTTGGCGGCGATGACTGCGGTCGCTACAGGGCTATTCTGGCGTTTGTTGATCGCCTCTCTGGTGATGTTGATTGCCGGTTATCTTGGCGAAGTGAATGCCGGGAATGCGACTGCGCTCTGGGTGCTGTTTATTATCGGCATGGCTGGATGGATTTACATCATCTACGAGGTATTCGCCGGTGAAGCCAGCCGCATCAATGCTAGCGAAGGCACCGTTGCCGGTCAGAAAGCGTTTAACGCGCTGCGCCTGATCGTCACCGTG LLTVPLQIVEFYLILAAMTAVATGLFWRLLIASLVMLIAGYLGEVNAGNATALWVLFIIGMAGWIYIIYEVFAGEASRINASEGTVAGQKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTGACGGTGCCCCTGCAGATCGTCGAATTCTACCTTATCTTGGCGGCG---------ATG---ACTGCGGTCGCTACA---GGGCTA------------------------------------TTCTGGCGT---TTGTTGATCGCCTCTCTGGTGATGTTGATTGCCGGTTATCTTGGCGAA---------GTG------------------AAT------GCC---------------------------------GGG------------------------------------------------------------------AATGCG---------ACTGCGCTCTGGGTGCTG---TTTATTATCGGCATGGCTGGATGGATTTACATCATCTACGAGGTA---------------TTC------GCC---GGTGAAGCCAGCCGCATCAATGCTAGC------GAA---GGCACCGTTGCCGGT---CAG---AAA---GCG---TTT---AAC---GCGCTG---CGCCTGATCGTCACCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---M-TAVAT-GL------------FWR-LLIASLVMLIAGYLGE---V------N--A-----------G----------------------NA---TALWVL-FIIGMAGWIYIIYEV-----F--A-GEASRINAS--E-GTVAG-Q-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ928086 [unk-Proteo2-a] PRGD_OTU024_1174e36c6f858be8c6defee6e04baa5f gb|KJ928086| PRGD_OTU024_1174e36c6f858be8c6defee6e04baa5f, putative proteorhodopsin gene, partial cds. PRGD_OTU024_1174e36c6f858be8c6defee6e04baa5f, putative proteorhodopsin gene, partial cds. KJ928086 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.935 18.508 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGCTGACGGTGCCCCTGCAGATCGTCGAATTCTACCTCATCTTGGCGGCGATGACTGCAGTCGCTACAGGGCTATTCTGGCGTTTGTTGATCGCCTCTCTGGTGATGTTGATCGCCGGTTATCTTGGCGAAGTGAATGCTGGGAATGCAACTGCGCTCTGGGTGCTGTTTATTATCGGTATGGCTGGATGGATTTACATCATCTACGAGGTATTCGCCGGTGAAGCCAGCCGCATTAATGCTAGCGAAGGCACCGTTGCCGGTCAGAAAGCGTTTAACGCGCTGCGCCTGATCGTCACCGTG LLTVPLQIVEFYLILAAMTAVATGLFWRLLIASLVMLIAGYLGEVNAGNATALWVLFIIGMAGWIYIIYEVFAGEASRINASEGTVAGQKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTGACGGTGCCCCTGCAGATCGTCGAATTCTACCTCATCTTGGCGGCG---------ATG---ACTGCAGTCGCTACA---GGGCTA------------------------------------TTCTGGCGT---TTGTTGATCGCCTCTCTGGTGATGTTGATCGCCGGTTATCTTGGCGAA---------GTG------------------AAT------GCT---------------------------------GGG------------------------------------------------------------------AATGCA---------ACTGCGCTCTGGGTGCTG---TTTATTATCGGTATGGCTGGATGGATTTACATCATCTACGAGGTA---------------TTC------GCC---GGTGAAGCCAGCCGCATTAATGCTAGC------GAA---GGCACCGTTGCCGGT---CAG---AAA---GCG---TTT---AAC---GCGCTG---CGCCTGATCGTCACCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---M-TAVAT-GL------------FWR-LLIASLVMLIAGYLGE---V------N--A-----------G----------------------NA---TALWVL-FIIGMAGWIYIIYEV-----F--A-GEASRINAS--E-GTVAG-Q-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ928099 [unk-Proteo2-a] PRGD_OTU024_6257a30236d5832dd27992f6bba9b8ae gb|KJ928099| PRGD_OTU024_6257a30236d5832dd27992f6bba9b8ae, putative proteorhodopsin gene, partial cds. PRGD_OTU024_6257a30236d5832dd27992f6bba9b8ae, putative proteorhodopsin gene, partial cds. KJ928099 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGCTGACGGTGCCCCTGCAGATCGTCGAATTCTACCTTATCTTGGCGGCGATGACTGCAGTCGCTACAGGGTTATTCTGGCGTTTGTTAATCGCCTCTCTGGTGATGTTGATCGCCGGTTATCTTGGCGAAGTTAATGCCGGGAACGCAACTGCGCTCTGGGTGCTGTTTATTATCGGTATGGCTGGATGGATTTACATCATCTACGAGGTGTTCGCCGGTGAAGCCAGCCGCATCAATGCCAGCGAAGGCACCGTTGCCGGTCAGAAAGCGTTTAACGCGCTGCGCCTGATCGTCACCGTG LLTVPLQIVEFYLILAAMTAVATGLFWRLLIASLVMLIAGYLGEVNAGNATALWVLFIIGMAGWIYIIYEVFAGEASRINASEGTVAGQKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTGACGGTGCCCCTGCAGATCGTCGAATTCTACCTTATCTTGGCGGCG---------ATG---ACTGCAGTCGCTACA---GGGTTA------------------------------------TTCTGGCGT---TTGTTAATCGCCTCTCTGGTGATGTTGATCGCCGGTTATCTTGGCGAA---------GTT------------------AAT------GCC---------------------------------GGG------------------------------------------------------------------AACGCA---------ACTGCGCTCTGGGTGCTG---TTTATTATCGGTATGGCTGGATGGATTTACATCATCTACGAGGTG---------------TTC------GCC---GGTGAAGCCAGCCGCATCAATGCCAGC------GAA---GGCACCGTTGCCGGT---CAG---AAA---GCG---TTT---AAC---GCGCTG---CGCCTGATCGTCACCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---M-TAVAT-GL------------FWR-LLIASLVMLIAGYLGE---V------N--A-----------G----------------------NA---TALWVL-FIIGMAGWIYIIYEV-----F--A-GEASRINAS--E-GTVAG-Q-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ928115 [unk-Proteo2-a] PRGD_OTU024_d30d4ef87c9cba37f44e6174cd25b6d7 gb|KJ928115| PRGD_OTU024_d30d4ef87c9cba37f44e6174cd25b6d7, putative proteorhodopsin gene, partial cds. PRGD_OTU024_d30d4ef87c9cba37f44e6174cd25b6d7, putative proteorhodopsin gene, partial cds. KJ928115 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.935 18.508 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (33.935, 18.508), Indian Ocean (-33.28, 45.35) CTGCTGACGGTGCCCCTGCAGATCGTCGAATTCTACCTTATCTTGGCGGCAATGACTGCAGTCGCTACAGGTCTATTCTGGCGTTTGTTGATCGCCTCTCTGGTGATGTTGATCGCCGGTTATCTTGGCGAAGTGAATGCCGGGAATGCGACTGCGCTCTGGGTGCTGTTTATTATTGGTATGGCTGGATGGATTTACATCATCTACGAGGTATTCGCCGGTGAAGCCAGCCGCATCAATGCTAGCGAAGGCACCGTTGCCGGTCAGAAAGCGTTTAACGCGCTGCGCCTGATCGTCACCGTG LLTVPLQIVEFYLILAAMTAVATGLFWRLLIASLVMLIAGYLGEVNAGNATALWVLFIIGMAGWIYIIYEVFAGEASRINASEGTVAGQKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTGACGGTGCCCCTGCAGATCGTCGAATTCTACCTTATCTTGGCGGCA---------ATG---ACTGCAGTCGCTACA---GGTCTA------------------------------------TTCTGGCGT---TTGTTGATCGCCTCTCTGGTGATGTTGATCGCCGGTTATCTTGGCGAA---------GTG------------------AAT------GCC---------------------------------GGG------------------------------------------------------------------AATGCG---------ACTGCGCTCTGGGTGCTG---TTTATTATTGGTATGGCTGGATGGATTTACATCATCTACGAGGTA---------------TTC------GCC---GGTGAAGCCAGCCGCATCAATGCTAGC------GAA---GGCACCGTTGCCGGT---CAG---AAA---GCG---TTT---AAC---GCGCTG---CGCCTGATCGTCACCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---M-TAVAT-GL------------FWR-LLIASLVMLIAGYLGE---V------N--A-----------G----------------------NA---TALWVL-FIIGMAGWIYIIYEV-----F--A-GEASRINAS--E-GTVAG-Q-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ928119 [unk-Proteo2-a] PRGD_OTU024_fbd50feabe4403f443d2f4184197fb68 gb|KJ928119| PRGD_OTU024_fbd50feabe4403f443d2f4184197fb68, putative proteorhodopsin gene, partial cds. PRGD_OTU024_fbd50feabe4403f443d2f4184197fb68, putative proteorhodopsin gene, partial cds. KJ928119 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTGCTGACGGTGCCCCTGCAGATCGTCGAATTCTACCTTATCTTGGCGGCAATGACTGCAGTCGCTACAGGGCTATTCTGGCGTTTGTTGATCGCCTCTCTGGTGATGTTGATCGCCGGTTATCTTGGCGAAGTGAATGCTGGGAATGCGACTGCGCTCTGGGTGCTGTTTATTATCGGTATGGCTGGATGGATTTACATCATCTACGAGGTATTCGCCGGTGAAGCCAGCCGCATTAATGCTAGCGAAGGCACCGTTGCCGGACAGAAAGCGTTTAACGCGCTGCGCCTGATCGTCACCGTG LLTVPLQIVEFYLILAAMTAVATGLFWRLLIASLVMLIAGYLGEVNAGNATALWVLFIIGMAGWIYIIYEVFAGEASRINASEGTVAGQKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTGACGGTGCCCCTGCAGATCGTCGAATTCTACCTTATCTTGGCGGCA---------ATG---ACTGCAGTCGCTACA---GGGCTA------------------------------------TTCTGGCGT---TTGTTGATCGCCTCTCTGGTGATGTTGATCGCCGGTTATCTTGGCGAA---------GTG------------------AAT------GCT---------------------------------GGG------------------------------------------------------------------AATGCG---------ACTGCGCTCTGGGTGCTG---TTTATTATCGGTATGGCTGGATGGATTTACATCATCTACGAGGTA---------------TTC------GCC---GGTGAAGCCAGCCGCATTAATGCTAGC------GAA---GGCACCGTTGCCGGA---CAG---AAA---GCG---TTT---AAC---GCGCTG---CGCCTGATCGTCACCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---M-TAVAT-GL------------FWR-LLIASLVMLIAGYLGE---V------N--A-----------G----------------------NA---TALWVL-FIIGMAGWIYIIYEV-----F--A-GEASRINAS--E-GTVAG-Q-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ928107 [unk-Proteo2-a] PRGD_OTU024_8a4b6fd2b0c9d9da3b77c5b628128d27 gb|KJ928107| PRGD_OTU024_8a4b6fd2b0c9d9da3b77c5b628128d27, putative proteorhodopsin gene, partial cds. PRGD_OTU024_8a4b6fd2b0c9d9da3b77c5b628128d27, putative proteorhodopsin gene, partial cds. KJ928107 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.935 18.508 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Arctic Ocean-Pacific side (69.5142, -133.4185), Mediterranean Sea (33.762, 29.175; 33.935, 18.508), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTGCTGACGGTGCCCCTGCAGATCGTCGAATTCTACCTTATTTTGGCGGCGATGACTGCAGTCGCTACAGGGCTATTCTGGCGTTTGTTGATCGCTTCTCTGGTGATGTTGATCGCCGGTTATCTTGGCGAAGTGAATGCCGGGAATGCGACTGCGCTCTGGGTGCTGTTTATTATCGGTATGGCTGGATGGATTTACATCATCTACGAGGTATTCGCCGGTGAAGCCAGCCGCATCAATGCTAGCGAAGGCACCGTTGCCGGTCAGAAAGCGTTTAACGCGCTGCGCCTGATCGTCACCGTG LLTVPLQIVEFYLILAAMTAVATGLFWRLLIASLVMLIAGYLGEVNAGNATALWVLFIIGMAGWIYIIYEVFAGEASRINASEGTVAGQKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTGACGGTGCCCCTGCAGATCGTCGAATTCTACCTTATTTTGGCGGCG---------ATG---ACTGCAGTCGCTACA---GGGCTA------------------------------------TTCTGGCGT---TTGTTGATCGCTTCTCTGGTGATGTTGATCGCCGGTTATCTTGGCGAA---------GTG------------------AAT------GCC---------------------------------GGG------------------------------------------------------------------AATGCG---------ACTGCGCTCTGGGTGCTG---TTTATTATCGGTATGGCTGGATGGATTTACATCATCTACGAGGTA---------------TTC------GCC---GGTGAAGCCAGCCGCATCAATGCTAGC------GAA---GGCACCGTTGCCGGT---CAG---AAA---GCG---TTT---AAC---GCGCTG---CGCCTGATCGTCACCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---M-TAVAT-GL------------FWR-LLIASLVMLIAGYLGE---V------N--A-----------G----------------------NA---TALWVL-FIIGMAGWIYIIYEV-----F--A-GEASRINAS--E-GTVAG-Q-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ928082 [unk-Proteo2-a] PRGD_OTU024_otuREP_9debb867edbf7976790d62117cac2af6 gb|KJ928082| PRGD_OTU024_otuREP_9debb867edbf7976790d62117cac2af6, putative proteorhodopsin gene, partial cds. PRGD_OTU024_otuREP_9debb867edbf7976790d62117cac2af6, putative proteorhodopsin gene, partial cds. KJ928082 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTGCTGACGGTGCCCCTGCAGATCGTCGAATTCTACCTTATCTTGGCGGCGATGACTGCAGTCGCTACGGGGCTATTCTGGCGTTTGTTGATCGCCTCTCTGGTGATGTTGATCGCCGGTTATCTTGGCGAAGTGAATGCCGGGAATGCGACTGCGCTCTGGGTGCTGTTTATTATCGGTATGGCTGGATGGATTTACATCATCTACGAGGTATTCGCCGGTGAAGCCAGCCGCATCAATGCTAGCGAAGGCACCGTTGCCGGTCAGAAAGCGTTTAACGCGCTGCGCCTGATCGTCACCGTG LLTVPLQIVEFYLILAAMTAVATGLFWRLLIASLVMLIAGYLGEVNAGNATALWVLFIIGMAGWIYIIYEVFAGEASRINASEGTVAGQKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTGACGGTGCCCCTGCAGATCGTCGAATTCTACCTTATCTTGGCGGCG---------ATG---ACTGCAGTCGCTACG---GGGCTA------------------------------------TTCTGGCGT---TTGTTGATCGCCTCTCTGGTGATGTTGATCGCCGGTTATCTTGGCGAA---------GTG------------------AAT------GCC---------------------------------GGG------------------------------------------------------------------AATGCG---------ACTGCGCTCTGGGTGCTG---TTTATTATCGGTATGGCTGGATGGATTTACATCATCTACGAGGTA---------------TTC------GCC---GGTGAAGCCAGCCGCATCAATGCTAGC------GAA---GGCACCGTTGCCGGT---CAG---AAA---GCG---TTT---AAC---GCGCTG---CGCCTGATCGTCACCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---M-TAVAT-GL------------FWR-LLIASLVMLIAGYLGE---V------N--A-----------G----------------------NA---TALWVL-FIIGMAGWIYIIYEV-----F--A-GEASRINAS--E-GTVAG-Q-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ928105 [unk-Proteo2-a] PRGD_OTU024_80aaaf069315d00465db7c3ccce5ff74 gb|KJ928105| PRGD_OTU024_80aaaf069315d00465db7c3ccce5ff74, putative proteorhodopsin gene, partial cds. PRGD_OTU024_80aaaf069315d00465db7c3ccce5ff74, putative proteorhodopsin gene, partial cds. KJ928105 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTGCTGACGGTGCCCCTGCAGATCGTCGAATTCTACCTTATCTTGGCGGCGATGACTGCAGTCGCTACAGGGCTATTCTGGCGTTTGTTGATTGCCTCTCTGGTGATGTTGATCGCCGGTTATCTTGGCGAAGTGAATTCCGGGAATGCGACTGCGCTCTGGGTGCTGTTTATTATCGGTATGGCTGGATGGATTTACATCATCTACGAGGTATTCGCCGGTGAAGCCAGCCGCATCAATGCTAGCGAAGGCACCGTTGCCGGTCAGAAAGCGTTTAACGCGCTGCGCCTGATCGTCACCGTG LLTVPLQIVEFYLILAAMTAVATGLFWRLLIASLVMLIAGYLGEVNSGNATALWVLFIIGMAGWIYIIYEVFAGEASRINASEGTVAGQKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTGACGGTGCCCCTGCAGATCGTCGAATTCTACCTTATCTTGGCGGCG---------ATG---ACTGCAGTCGCTACA---GGGCTA------------------------------------TTCTGGCGT---TTGTTGATTGCCTCTCTGGTGATGTTGATCGCCGGTTATCTTGGCGAA---------GTG------------------AAT------TCC---------------------------------GGG------------------------------------------------------------------AATGCG---------ACTGCGCTCTGGGTGCTG---TTTATTATCGGTATGGCTGGATGGATTTACATCATCTACGAGGTA---------------TTC------GCC---GGTGAAGCCAGCCGCATCAATGCTAGC------GAA---GGCACCGTTGCCGGT---CAG---AAA---GCG---TTT---AAC---GCGCTG---CGCCTGATCGTCACCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---M-TAVAT-GL------------FWR-LLIASLVMLIAGYLGE---V------N--S-----------G----------------------NA---TALWVL-FIIGMAGWIYIIYEV-----F--A-GEASRINAS--E-GTVAG-Q-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ928089 [unk-Proteo2-a] PRGD_OTU024_24143420e22dc9be0683dd2c958ca941 gb|KJ928089| PRGD_OTU024_24143420e22dc9be0683dd2c958ca941, putative proteorhodopsin gene, partial cds. PRGD_OTU024_24143420e22dc9be0683dd2c958ca941, putative proteorhodopsin gene, partial cds. KJ928089 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683) CTGCTGACGGTGCCCCTGCAGATCGTCGAATTCTACCTTATCTTGGCGGCGATGACTGCAGTCGCCACAGGGCTATTCTGGCGTTTGTTGATCGCCTCTCTGGTGATGTTGATCGCTGGTTATCTTGGCGAAGTGAATTCCGGGAATGCGACTGCGCTCTGGGTGCTGTTTATTATCGGTATGGCTGGATGGATTTACATCATCTACGAGGTATTCGCCGGTGAAGCGAGCCGCATCAATGCGAGCGAAGGCACCGTTGCCGGTCAGAAAGCATTTAACGCGCTGCGCCTGATCGTCACCGTG LLTVPLQIVEFYLILAAMTAVATGLFWRLLIASLVMLIAGYLGEVNSGNATALWVLFIIGMAGWIYIIYEVFAGEASRINASEGTVAGQKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTGACGGTGCCCCTGCAGATCGTCGAATTCTACCTTATCTTGGCGGCG---------ATG---ACTGCAGTCGCCACA---GGGCTA------------------------------------TTCTGGCGT---TTGTTGATCGCCTCTCTGGTGATGTTGATCGCTGGTTATCTTGGCGAA---------GTG------------------AAT------TCC---------------------------------GGG------------------------------------------------------------------AATGCG---------ACTGCGCTCTGGGTGCTG---TTTATTATCGGTATGGCTGGATGGATTTACATCATCTACGAGGTA---------------TTC------GCC---GGTGAAGCGAGCCGCATCAATGCGAGC------GAA---GGCACCGTTGCCGGT---CAG---AAA---GCA---TTT---AAC---GCGCTG---CGCCTGATCGTCACCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---M-TAVAT-GL------------FWR-LLIASLVMLIAGYLGE---V------N--S-----------G----------------------NA---TALWVL-FIIGMAGWIYIIYEV-----F--A-GEASRINAS--E-GTVAG-Q-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ928096 [unk-Proteo2-a] PRGD_OTU024_3952ef60598127edbce4017f1edaf931 gb|KJ928096| PRGD_OTU024_3952ef60598127edbce4017f1edaf931, putative proteorhodopsin gene, partial cds. PRGD_OTU024_3952ef60598127edbce4017f1edaf931, putative proteorhodopsin gene, partial cds. KJ928096 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGCTGACGGTGCCCCTGCAGATCGTCGAATTCTACCTTATCTTGGCGGCGATGACTGCAGTCGCTACAGGACTATTCTGGCGTTTGTTGATCGCCTCTCTGGTGATGTTGATCGCTGGTTATCTTGGCGAAGTGAATGCCGGGAATGCGACTGCGCTCTGGGTGCTGTTTATTATCGGTATGGCTGGATGGATTTACATCATCTACGAGGTATTTGCCGGTGAAGCGAGCCGCATCAATGCGAGCGAAGGCACCGTTGCCGGTCAGAAAGCATTTAACGCGCTGCGCCTGATCGTCACCGTG LLTVPLQIVEFYLILAAMTAVATGLFWRLLIASLVMLIAGYLGEVNAGNATALWVLFIIGMAGWIYIIYEVFAGEASRINASEGTVAGQKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTGACGGTGCCCCTGCAGATCGTCGAATTCTACCTTATCTTGGCGGCG---------ATG---ACTGCAGTCGCTACA---GGACTA------------------------------------TTCTGGCGT---TTGTTGATCGCCTCTCTGGTGATGTTGATCGCTGGTTATCTTGGCGAA---------GTG------------------AAT------GCC---------------------------------GGG------------------------------------------------------------------AATGCG---------ACTGCGCTCTGGGTGCTG---TTTATTATCGGTATGGCTGGATGGATTTACATCATCTACGAGGTA---------------TTT------GCC---GGTGAAGCGAGCCGCATCAATGCGAGC------GAA---GGCACCGTTGCCGGT---CAG---AAA---GCA---TTT---AAC---GCGCTG---CGCCTGATCGTCACCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---M-TAVAT-GL------------FWR-LLIASLVMLIAGYLGE---V------N--A-----------G----------------------NA---TALWVL-FIIGMAGWIYIIYEV-----F--A-GEASRINAS--E-GTVAG-Q-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ928091 [unk-Proteo2-a] PRGD_OTU024_2df99323c17354d2ed88facab268778f gb|KJ928091| PRGD_OTU024_2df99323c17354d2ed88facab268778f, putative proteorhodopsin gene, partial cds. PRGD_OTU024_2df99323c17354d2ed88facab268778f, putative proteorhodopsin gene, partial cds. KJ928091 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGCTGACGGTGCCCCTGCAGATCGTCGAATTCTACCTTATTTTAGCGGCGATGACTGCAGTCGCTACAGGGCTATTCTGGCGTTTGTTGATCGCCTCTTTGGTGATGTTGATCGCCGGTTATCTTGGCGAAGTGAATGCCGGGAATGCGACTGCGCTCTGGGTGCTGTTTCTTATCGGTCTGGCTGGATGGATTTACATCATCTACGAGGTATTCGCCGGTGAGGCCAGCCGCATCAACGCGAGCGAAGGCACCGTTGCGGGTCAGAAAGCGTTTAACGCTCTGCGCCTGATCGTCACCGTA LLTVPLQIVEFYLILAAMTAVATGLFWRLLIASLVMLIAGYLGEVNAGNATALWVLFLIGLAGWIYIIYEVFAGEASRINASEGTVAGQKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTGACGGTGCCCCTGCAGATCGTCGAATTCTACCTTATTTTAGCGGCG---------ATG---ACTGCAGTCGCTACA---GGGCTA------------------------------------TTCTGGCGT---TTGTTGATCGCCTCTTTGGTGATGTTGATCGCCGGTTATCTTGGCGAA---------GTG------------------AAT------GCC---------------------------------GGG------------------------------------------------------------------AATGCG---------ACTGCGCTCTGGGTGCTG---TTTCTTATCGGTCTGGCTGGATGGATTTACATCATCTACGAGGTA---------------TTC------GCC---GGTGAGGCCAGCCGCATCAACGCGAGC------GAA---GGCACCGTTGCGGGT---CAG---AAA---GCG---TTT---AAC---GCTCTG---CGCCTGATCGTCACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---M-TAVAT-GL------------FWR-LLIASLVMLIAGYLGE---V------N--A-----------G----------------------NA---TALWVL-FLIGLAGWIYIIYEV-----F--A-GEASRINAS--E-GTVAG-Q-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ928098 [unk-Proteo2-a] PRGD_OTU024_5b7e7a3ba89709a8ef9b9abe86761700 gb|KJ928098| PRGD_OTU024_5b7e7a3ba89709a8ef9b9abe86761700, putative proteorhodopsin gene, partial cds. PRGD_OTU024_5b7e7a3ba89709a8ef9b9abe86761700, putative proteorhodopsin gene, partial cds. KJ928098 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTGCTGACGGTGCCCCTGCAGATCGTCGAATTCTACCTTATCTTGGCGGCGATGACTGCAGTCGCTACAGGGCTATTCTGGCGTTTGTTGATCGCCTCTCTGGTGATGTTAATCGCCGGTTATCTTGGCGAAGTGAATGCCGGGAATGCGACTGCGCTCTGGGTGCTGTTTATTATCGGTATGGCTGGATGGATTTACATCATCTATGAGGTATTCGCCGGTGAAGCCAGCCGCATTAACGCGAGCGAAGGCACTGTTGCGGGTCAGAAAGCGTTTAACGCGCTGCGCCTGATCGTCACCGTG LLTVPLQIVEFYLILAAMTAVATGLFWRLLIASLVMLIAGYLGEVNAGNATALWVLFIIGMAGWIYIIYEVFAGEASRINASEGTVAGQKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTGACGGTGCCCCTGCAGATCGTCGAATTCTACCTTATCTTGGCGGCG---------ATG---ACTGCAGTCGCTACA---GGGCTA------------------------------------TTCTGGCGT---TTGTTGATCGCCTCTCTGGTGATGTTAATCGCCGGTTATCTTGGCGAA---------GTG------------------AAT------GCC---------------------------------GGG------------------------------------------------------------------AATGCG---------ACTGCGCTCTGGGTGCTG---TTTATTATCGGTATGGCTGGATGGATTTACATCATCTATGAGGTA---------------TTC------GCC---GGTGAAGCCAGCCGCATTAACGCGAGC------GAA---GGCACTGTTGCGGGT---CAG---AAA---GCG---TTT---AAC---GCGCTG---CGCCTGATCGTCACCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---M-TAVAT-GL------------FWR-LLIASLVMLIAGYLGE---V------N--A-----------G----------------------NA---TALWVL-FIIGMAGWIYIIYEV-----F--A-GEASRINAS--E-GTVAG-Q-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ928111 [unk-Proteo2-a] PRGD_OTU024_c092f6fd10c2629163770956b8d93f95 gb|KJ928111| PRGD_OTU024_c092f6fd10c2629163770956b8d93f95, putative proteorhodopsin gene, partial cds. PRGD_OTU024_c092f6fd10c2629163770956b8d93f95, putative proteorhodopsin gene, partial cds. KJ928111 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTGCTGACGGTGCCACTGCAGATCGTCGAATTCTACCTCATCTTAGCGGCGATGACTGCAGTCGCTACAGGGCTATTCTGGCGTTTGTTGATCGCCTCTCTGGTGATGTTGATCGCCGGTTATCTTGGCGAAGTGAATGCCGGGAATGCGACTGCGCTCTGGGTGCTGTTTATTATCGGTATGGCCGGATGGATTTACATCATCTACGAGGTATTCGCCGGTGAAGCCAGCCGCATCAACGCGAGCGAAGGCACTGTTGCGGGTCAGAAAGCGTTTAACGCGCTGCGCCTGATCGTCACCGTA LLTVPLQIVEFYLILAAMTAVATGLFWRLLIASLVMLIAGYLGEVNAGNATALWVLFIIGMAGWIYIIYEVFAGEASRINASEGTVAGQKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTGACGGTGCCACTGCAGATCGTCGAATTCTACCTCATCTTAGCGGCG---------ATG---ACTGCAGTCGCTACA---GGGCTA------------------------------------TTCTGGCGT---TTGTTGATCGCCTCTCTGGTGATGTTGATCGCCGGTTATCTTGGCGAA---------GTG------------------AAT------GCC---------------------------------GGG------------------------------------------------------------------AATGCG---------ACTGCGCTCTGGGTGCTG---TTTATTATCGGTATGGCCGGATGGATTTACATCATCTACGAGGTA---------------TTC------GCC---GGTGAAGCCAGCCGCATCAACGCGAGC------GAA---GGCACTGTTGCGGGT---CAG---AAA---GCG---TTT---AAC---GCGCTG---CGCCTGATCGTCACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---M-TAVAT-GL------------FWR-LLIASLVMLIAGYLGE---V------N--A-----------G----------------------NA---TALWVL-FIIGMAGWIYIIYEV-----F--A-GEASRINAS--E-GTVAG-Q-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ928092 [unk-Proteo2-a] PRGD_OTU024_2fab3f77aef4714255b6d8ed2143babb gb|KJ928092| PRGD_OTU024_2fab3f77aef4714255b6d8ed2143babb, putative proteorhodopsin gene, partial cds. PRGD_OTU024_2fab3f77aef4714255b6d8ed2143babb, putative proteorhodopsin gene, partial cds. KJ928092 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGCTGACGGTGCCCCTGCAGATCGTCGAATTCTACCTCATCTTGGCGGCGATGACTGCAGTCGCTACAGGGCTATTCTGGCGTTTGTTGATCGCCTCTCTGGTGATGTTGATCGCCGGTTATCTTGGCGAAGTGAATTCCGGGAATGCGACTGCGCTCTGGGTGCTGTTTATTATCGGTATGGCCGGATGGATTTACATCATCTACGAGGTATTTGCCGGTGAAGCCAGCCGCATCAACGCGAGCGAAGGCACCGTTGCGGGTCAGAAAGCGTTTAACGCGCTGCGCCTGATCGTCACCGTA LLTVPLQIVEFYLILAAMTAVATGLFWRLLIASLVMLIAGYLGEVNSGNATALWVLFIIGMAGWIYIIYEVFAGEASRINASEGTVAGQKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTGACGGTGCCCCTGCAGATCGTCGAATTCTACCTCATCTTGGCGGCG---------ATG---ACTGCAGTCGCTACA---GGGCTA------------------------------------TTCTGGCGT---TTGTTGATCGCCTCTCTGGTGATGTTGATCGCCGGTTATCTTGGCGAA---------GTG------------------AAT------TCC---------------------------------GGG------------------------------------------------------------------AATGCG---------ACTGCGCTCTGGGTGCTG---TTTATTATCGGTATGGCCGGATGGATTTACATCATCTACGAGGTA---------------TTT------GCC---GGTGAAGCCAGCCGCATCAACGCGAGC------GAA---GGCACCGTTGCGGGT---CAG---AAA---GCG---TTT---AAC---GCGCTG---CGCCTGATCGTCACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---M-TAVAT-GL------------FWR-LLIASLVMLIAGYLGE---V------N--S-----------G----------------------NA---TALWVL-FIIGMAGWIYIIYEV-----F--A-GEASRINAS--E-GTVAG-Q-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ928088 [unk-Proteo2-a] PRGD_OTU024_1e77074aaa23bc9cca7a7d46fea05532 gb|KJ928088| PRGD_OTU024_1e77074aaa23bc9cca7a7d46fea05532, putative proteorhodopsin gene, partial cds. PRGD_OTU024_1e77074aaa23bc9cca7a7d46fea05532, putative proteorhodopsin gene, partial cds. KJ928088 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) CTGCTGACGGTGCCCCTGCAGATCGTCGAATTCTATCTTATCTTGGCGGCGATGACTGCAGTCGCTACAGGGCTATTCTGGCGTTTGTTGATCGCCTCTCTGGTGATGTTGATCGCCGGTTATCTTGGCGAAGTGAATTCCGGGAATGCGACTGCGCTCTGGGTGCTGTTTATTATCGGTATGGCTGGATGGATTTACATCATCTACGAGGTATTCGCTGGTGAAGCCAGCCGCATCAACGCGAGCGAAGGCACCGTTGCTGGTCAGAAAGCGTTTAACGCGCTGCGCCTGATCGTCACTGTA LLTVPLQIVEFYLILAAMTAVATGLFWRLLIASLVMLIAGYLGEVNSGNATALWVLFIIGMAGWIYIIYEVFAGEASRINASEGTVAGQKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTGACGGTGCCCCTGCAGATCGTCGAATTCTATCTTATCTTGGCGGCG---------ATG---ACTGCAGTCGCTACA---GGGCTA------------------------------------TTCTGGCGT---TTGTTGATCGCCTCTCTGGTGATGTTGATCGCCGGTTATCTTGGCGAA---------GTG------------------AAT------TCC---------------------------------GGG------------------------------------------------------------------AATGCG---------ACTGCGCTCTGGGTGCTG---TTTATTATCGGTATGGCTGGATGGATTTACATCATCTACGAGGTA---------------TTC------GCT---GGTGAAGCCAGCCGCATCAACGCGAGC------GAA---GGCACCGTTGCTGGT---CAG---AAA---GCG---TTT---AAC---GCGCTG---CGCCTGATCGTCACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---M-TAVAT-GL------------FWR-LLIASLVMLIAGYLGE---V------N--S-----------G----------------------NA---TALWVL-FIIGMAGWIYIIYEV-----F--A-GEASRINAS--E-GTVAG-Q-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ928117 [unk-Proteo2-a] PRGD_OTU024_eb27fbda3f00f17d168fc573ae96d942 gb|KJ928117| PRGD_OTU024_eb27fbda3f00f17d168fc573ae96d942, putative proteorhodopsin gene, partial cds. PRGD_OTU024_eb27fbda3f00f17d168fc573ae96d942, putative proteorhodopsin gene, partial cds. KJ928117 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTGCTGACGGTGCCCCTGCAGATCGTCGAATTCTATCTTATCTTGGCGGCGATGACTGCCGTCGCTACAGGTCTATTCTGGCGTTTGTTGATCGCTTCTCTGGTGATGTTGATCGCCGGATATCTCGGCGAAGTGAATTCCGGTAATGCGACTGCGCTCTGGGTGCTGTTCATCATCGGTATGGCGGGATGGATTTACATCATCTACGAGGTATTCGCCGGGGAAGCCAGCCGCATCAACGCGAGCGAAGGCACAGTTGCCGGTCAGAAAGCGTTTAACGCGCTGCGCCTGATCGTCACCGTG LLTVPLQIVEFYLILAAMTAVATGLFWRLLIASLVMLIAGYLGEVNSGNATALWVLFIIGMAGWIYIIYEVFAGEASRINASEGTVAGQKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTGACGGTGCCCCTGCAGATCGTCGAATTCTATCTTATCTTGGCGGCG---------ATG---ACTGCCGTCGCTACA---GGTCTA------------------------------------TTCTGGCGT---TTGTTGATCGCTTCTCTGGTGATGTTGATCGCCGGATATCTCGGCGAA---------GTG------------------AAT------TCC---------------------------------GGT------------------------------------------------------------------AATGCG---------ACTGCGCTCTGGGTGCTG---TTCATCATCGGTATGGCGGGATGGATTTACATCATCTACGAGGTA---------------TTC------GCC---GGGGAAGCCAGCCGCATCAACGCGAGC------GAA---GGCACAGTTGCCGGT---CAG---AAA---GCG---TTT---AAC---GCGCTG---CGCCTGATCGTCACCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---M-TAVAT-GL------------FWR-LLIASLVMLIAGYLGE---V------N--S-----------G----------------------NA---TALWVL-FIIGMAGWIYIIYEV-----F--A-GEASRINAS--E-GTVAG-Q-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ928104 [unk-Proteo2-a] PRGD_OTU024_7a3b0e6c32a0fa9202de586ca2d08b0b gb|KJ928104| PRGD_OTU024_7a3b0e6c32a0fa9202de586ca2d08b0b, putative proteorhodopsin gene, partial cds. PRGD_OTU024_7a3b0e6c32a0fa9202de586ca2d08b0b, putative proteorhodopsin gene, partial cds. KJ928104 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (33.935, 18.508), Indian Ocean (-33.28, 45.35) CTGCTGACGGTGCCCCTGCAGATCGTCGAATTCTATCTCATCTTGGCGGCGATGACTGCCGTCGCTACAGGGCTGTTCTGGCGTTTGTTGATCGCCTCTCTGGTGATGTTGATCGCTGGTTATCTTGGCGAGGTTAATGCCGGGAATGCGACCGCGCTCTGGGTGCTGTTTATCATCGGTTTGGCTGGATGGATTTACATCATCTACGAGGTATTCGCTGGTGAAGCCAGCCGCATCAACGCGAGCGAAGGCACCGTTGCGGGTCAAAAAGCGTTTAACGCGTTGCGCCTGATCGTAACCGTG LLTVPLQIVEFYLILAAMTAVATGLFWRLLIASLVMLIAGYLGEVNAGNATALWVLFIIGLAGWIYIIYEVFAGEASRINASEGTVAGQKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTGACGGTGCCCCTGCAGATCGTCGAATTCTATCTCATCTTGGCGGCG---------ATG---ACTGCCGTCGCTACA---GGGCTG------------------------------------TTCTGGCGT---TTGTTGATCGCCTCTCTGGTGATGTTGATCGCTGGTTATCTTGGCGAG---------GTT------------------AAT------GCC---------------------------------GGG------------------------------------------------------------------AATGCG---------ACCGCGCTCTGGGTGCTG---TTTATCATCGGTTTGGCTGGATGGATTTACATCATCTACGAGGTA---------------TTC------GCT---GGTGAAGCCAGCCGCATCAACGCGAGC------GAA---GGCACCGTTGCGGGT---CAA---AAA---GCG---TTT---AAC---GCGTTG---CGCCTGATCGTAACCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---M-TAVAT-GL------------FWR-LLIASLVMLIAGYLGE---V------N--A-----------G----------------------NA---TALWVL-FIIGLAGWIYIIYEV-----F--A-GEASRINAS--E-GTVAG-Q-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ928100 [unk-Proteo2-a] PRGD_OTU024_663e541fbf92418962be9ed31ea4d94e gb|KJ928100| PRGD_OTU024_663e541fbf92418962be9ed31ea4d94e, putative proteorhodopsin gene, partial cds. PRGD_OTU024_663e541fbf92418962be9ed31ea4d94e, putative proteorhodopsin gene, partial cds. KJ928100 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTCTTGACCGTCCCGTTGCAGATTGTGGAGTTTTACCTCATCCTTGCTGCGATGACTGCTGTCGCCACTGGACTCTTCTGGCGTCTCCTGATTGCCTCCTTGGTGATGTTGATCGCTGGTTATCTTGGCGAGGTGAACTCCGGAAACCCAACCGCGCTGTGGGTTCTTTTCCTCATCGGTCTTGCTGGCTGGATATACATCATCTACGAGGTCTTTGCTGGAGAGGCTAGCCGAATCAACGCTAGCGAAGGCACTGTAGCTGGGCAGAAAGCGTTTAACGCGCTTCGACTAATCGTAACTGTC LLTVPLQIVEFYLILAAMTAVATGLFWRLLIASLVMLIAGYLGEVNSGNPTALWVLFLIGLAGWIYIIYEVFAGEASRINASEGTVAGQKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTGACCGTCCCGTTGCAGATTGTGGAGTTTTACCTCATCCTTGCTGCG---------ATG---ACTGCTGTCGCCACT---GGACTC------------------------------------TTCTGGCGT---CTCCTGATTGCCTCCTTGGTGATGTTGATCGCTGGTTATCTTGGCGAG---------GTG------------------AAC------TCC---------------------------------GGA------------------------------------------------------------------AACCCA---------ACCGCGCTGTGGGTTCTT---TTCCTCATCGGTCTTGCTGGCTGGATATACATCATCTACGAGGTC---------------TTT------GCT---GGAGAGGCTAGCCGAATCAACGCTAGC------GAA---GGCACTGTAGCTGGG---CAG---AAA---GCG---TTT---AAC---GCGCTT---CGACTAATCGTAACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---M-TAVAT-GL------------FWR-LLIASLVMLIAGYLGE---V------N--S-----------G----------------------NP---TALWVL-FLIGLAGWIYIIYEV-----F--A-GEASRINAS--E-GTVAG-Q-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ928114 [unk-Proteo2-a] PRGD_OTU024_c4bf20c40d7f97b3ab2c296e533ea883 gb|KJ928114| PRGD_OTU024_c4bf20c40d7f97b3ab2c296e533ea883, putative proteorhodopsin gene, partial cds. PRGD_OTU024_c4bf20c40d7f97b3ab2c296e533ea883, putative proteorhodopsin gene, partial cds. KJ928114 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCTTGACCGTCCCGTTGCAGATTGTGGAGTTTTACCTCATCCTTGCTGCGATGACTGCTGTCGCCACTGGGCTCTTCTGGCGCCTCCTGATTGCCTCATTGGTGATGTTGATCGCTGGTTATCTTGGCGAGGTGAACTCCGGGAATGCAACCGCGCTGTGGGTTCTTTTCCTCATCGGTCTTGCTGGCTGGATATACATCATCTACGAGGTCTTTGCTGGAGAGGCTAGCCGGATCAACGCTAGCGAAGGCACTGTAGCTGGGCAGAAAGCGTTTAACGCGCTTCGGCTAATCGTAACTGTC LLTVPLQIVEFYLILAAMTAVATGLFWRLLIASLVMLIAGYLGEVNSGNATALWVLFLIGLAGWIYIIYEVFAGEASRINASEGTVAGQKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTGACCGTCCCGTTGCAGATTGTGGAGTTTTACCTCATCCTTGCTGCG---------ATG---ACTGCTGTCGCCACT---GGGCTC------------------------------------TTCTGGCGC---CTCCTGATTGCCTCATTGGTGATGTTGATCGCTGGTTATCTTGGCGAG---------GTG------------------AAC------TCC---------------------------------GGG------------------------------------------------------------------AATGCA---------ACCGCGCTGTGGGTTCTT---TTCCTCATCGGTCTTGCTGGCTGGATATACATCATCTACGAGGTC---------------TTT------GCT---GGAGAGGCTAGCCGGATCAACGCTAGC------GAA---GGCACTGTAGCTGGG---CAG---AAA---GCG---TTT---AAC---GCGCTT---CGGCTAATCGTAACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---M-TAVAT-GL------------FWR-LLIASLVMLIAGYLGE---V------N--S-----------G----------------------NA---TALWVL-FLIGLAGWIYIIYEV-----F--A-GEASRINAS--E-GTVAG-Q-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ928084 [unk-Proteo2-a] PRGD_OTU024_07fe222428a1d0a3afb313935e9fafb8 gb|KJ928084| PRGD_OTU024_07fe222428a1d0a3afb313935e9fafb8, putative proteorhodopsin gene, partial cds. PRGD_OTU024_07fe222428a1d0a3afb313935e9fafb8, putative proteorhodopsin gene, partial cds. KJ928084 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) CTCTTGACCGTCCCGTTGCAGATTGTGGAGTTTTACCTCATCCTTGCTGCGATGACTGCTGTCGCGACTGGGCTTTTCTGGCGCCTCCTGATTGCCTCATTGGTGATGTTGATCGCTGGTTATCTTGGCGAGGTGAACTCCGGAAATGCAACCGCGCTGTGGGTTCTTTTCCTCATCGGTCTTGCTGGCTGGATATACATCATCTACGAGGTCTTTGCTGGAGAGGCTAGCCGAATCAACGCTAGCGAAGGCACTGTAGCTGGGCAGAAAGCGTTTAACGCGCTTCGGCTAATCGTAACTGTC LLTVPLQIVEFYLILAAMTAVATGLFWRLLIASLVMLIAGYLGEVNSGNATALWVLFLIGLAGWIYIIYEVFAGEASRINASEGTVAGQKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTGACCGTCCCGTTGCAGATTGTGGAGTTTTACCTCATCCTTGCTGCG---------ATG---ACTGCTGTCGCGACT---GGGCTT------------------------------------TTCTGGCGC---CTCCTGATTGCCTCATTGGTGATGTTGATCGCTGGTTATCTTGGCGAG---------GTG------------------AAC------TCC---------------------------------GGA------------------------------------------------------------------AATGCA---------ACCGCGCTGTGGGTTCTT---TTCCTCATCGGTCTTGCTGGCTGGATATACATCATCTACGAGGTC---------------TTT------GCT---GGAGAGGCTAGCCGAATCAACGCTAGC------GAA---GGCACTGTAGCTGGG---CAG---AAA---GCG---TTT---AAC---GCGCTT---CGGCTAATCGTAACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---M-TAVAT-GL------------FWR-LLIASLVMLIAGYLGE---V------N--S-----------G----------------------NA---TALWVL-FLIGLAGWIYIIYEV-----F--A-GEASRINAS--E-GTVAG-Q-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ928109 [unk-Proteo2-a] PRGD_OTU024_98b3cb621274663acd7b72d969aadf36 gb|KJ928109| PRGD_OTU024_98b3cb621274663acd7b72d969aadf36, putative proteorhodopsin gene, partial cds. PRGD_OTU024_98b3cb621274663acd7b72d969aadf36, putative proteorhodopsin gene, partial cds. KJ928109 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTTTTGACTGTTCCGCTGCAGATTGTTGAGTTCTACCTCATCCTCGCGGCGATGACGGCTGTTGCCACTGGACTTTTCTGGCGCCTCCTGATCGCCTCACTAGTGATGTTGATTGCTGGCTACCTCGGCGAGGTGAACTCTGGAAACGCAACCGCTCTGTGGGTGCTATTCCTGATCGGTCTAGCCGGCTGGATATACATTATTTACGAGGTCTTTGCCGGAGAGGCTAGCCGCATAAATGCCAGTGAAGGCACGGTTGCTGGGCAGAAGGCGTTTAATGCGCTCCGGATGATAGTGACTGTG LLTVPLQIVEFYLILAAMTAVATGLFWRLLIASLVMLIAGYLGEVNSGNATALWVLFLIGLAGWIYIIYEVFAGEASRINASEGTVAGQKAFNALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTGACTGTTCCGCTGCAGATTGTTGAGTTCTACCTCATCCTCGCGGCG---------ATG---ACGGCTGTTGCCACT---GGACTT------------------------------------TTCTGGCGC---CTCCTGATCGCCTCACTAGTGATGTTGATTGCTGGCTACCTCGGCGAG---------GTG------------------AAC------TCT---------------------------------GGA------------------------------------------------------------------AACGCA---------ACCGCTCTGTGGGTGCTA---TTCCTGATCGGTCTAGCCGGCTGGATATACATTATTTACGAGGTC---------------TTT------GCC---GGAGAGGCTAGCCGCATAAATGCCAGT------GAA---GGCACGGTTGCTGGG---CAG---AAG---GCG---TTT---AAT---GCGCTC---CGGATGATAGTGACTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---M-TAVAT-GL------------FWR-LLIASLVMLIAGYLGE---V------N--S-----------G----------------------NA---TALWVL-FLIGLAGWIYIIYEV-----F--A-GEASRINAS--E-GTVAG-Q-K-A-F-N-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ928110 [unk-Proteo2-a] PRGD_OTU024_990c84528757d324aa7d5308dc77cd24 gb|KJ928110| PRGD_OTU024_990c84528757d324aa7d5308dc77cd24, putative proteorhodopsin gene, partial cds. PRGD_OTU024_990c84528757d324aa7d5308dc77cd24, putative proteorhodopsin gene, partial cds. KJ928110 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683) CTTTTGACTGTTCCGCTGCAGATTGTTGAGTTCTACCTCATCCTCGCGGCGATGACGGCTGTTGCCACTGGACTTTTCTGGCGCCTCCTGATCGCCTCACTAGTGATGCTGATTGCTGGTTACCTCGGCGAGGTGAACTCCGGAAACGCAACCGCTCTGTGGGTGCTATTCCTGATCGGTCTAGCCGGCTGGATATACATTATTTACGAGGTCTTTGCCGGAGAGGCTAGCCGCATAAATGCCAGTGAAGGCACGGTTGCTGGGCAGAAGGCGTTTAATGCACTCCGGTTGATAGTGACTGTG LLTVPLQIVEFYLILAAMTAVATGLFWRLLIASLVMLIAGYLGEVNSGNATALWVLFLIGLAGWIYIIYEVFAGEASRINASEGTVAGQKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTGACTGTTCCGCTGCAGATTGTTGAGTTCTACCTCATCCTCGCGGCG---------ATG---ACGGCTGTTGCCACT---GGACTT------------------------------------TTCTGGCGC---CTCCTGATCGCCTCACTAGTGATGCTGATTGCTGGTTACCTCGGCGAG---------GTG------------------AAC------TCC---------------------------------GGA------------------------------------------------------------------AACGCA---------ACCGCTCTGTGGGTGCTA---TTCCTGATCGGTCTAGCCGGCTGGATATACATTATTTACGAGGTC---------------TTT------GCC---GGAGAGGCTAGCCGCATAAATGCCAGT------GAA---GGCACGGTTGCTGGG---CAG---AAG---GCG---TTT---AAT---GCACTC---CGGTTGATAGTGACTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---M-TAVAT-GL------------FWR-LLIASLVMLIAGYLGE---V------N--S-----------G----------------------NA---TALWVL-FLIGLAGWIYIIYEV-----F--A-GEASRINAS--E-GTVAG-Q-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ928085 [unk-Proteo2-a] PRGD_OTU024_0ae46c40f6a8b0710b4bab8468caf632 gb|KJ928085| PRGD_OTU024_0ae46c40f6a8b0710b4bab8468caf632, putative proteorhodopsin gene, partial cds. PRGD_OTU024_0ae46c40f6a8b0710b4bab8468caf632, putative proteorhodopsin gene, partial cds. KJ928085 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTTTGACTGTCCCACTGCAGATCGTTGAGTTCTATCTCATCCTTGCTGCTATGACAGCTGTCGCAACCGGCCTTTTTTGGAGGCTGCTTGTGGCATCACTCGTCATGCTCATTGCTGGTTATCTCGGCGAGGTGAACGCTGGGAATGCAACCGCGCTGTGGGTCCTGTTCTTAATCGGTCTCGCTGGCTGGATATACATTATTTACGAAGTGTTTGCCGGAGAGGCTAGTCGCATCAATGCCAATCAAGGCACGGTAGCTGGGCAAAAAGCGTTCAACGCACTTCGGCTGATCGTAACGGTC LLTVPLQIVEFYLILAAMTAVATGLFWRLLVASLVMLIAGYLGEVNAGNATALWVLFLIGLAGWIYIIYEVFAGEASRINANQGTVAGQKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTGACTGTCCCACTGCAGATCGTTGAGTTCTATCTCATCCTTGCTGCT---------ATG---ACAGCTGTCGCAACC---GGCCTT------------------------------------TTTTGGAGG---CTGCTTGTGGCATCACTCGTCATGCTCATTGCTGGTTATCTCGGCGAG---------GTG------------------AAC------GCT---------------------------------GGG------------------------------------------------------------------AATGCA---------ACCGCGCTGTGGGTCCTG---TTCTTAATCGGTCTCGCTGGCTGGATATACATTATTTACGAAGTG---------------TTT------GCC---GGAGAGGCTAGTCGCATCAATGCCAAT------CAA---GGCACGGTAGCTGGG---CAA---AAA---GCG---TTC---AAC---GCACTT---CGGCTGATCGTAACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---M-TAVAT-GL------------FWR-LLVASLVMLIAGYLGE---V------N--A-----------G----------------------NA---TALWVL-FLIGLAGWIYIIYEV-----F--A-GEASRINAN--Q-GTVAG-Q-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ928097 [unk-Proteo2-a] PRGD_OTU024_4be7e7c3501e87a91dc936fa6fbd92be gb|KJ928097| PRGD_OTU024_4be7e7c3501e87a91dc936fa6fbd92be, putative proteorhodopsin gene, partial cds. PRGD_OTU024_4be7e7c3501e87a91dc936fa6fbd92be, putative proteorhodopsin gene, partial cds. KJ928097 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTTTTGACGGTGCCGTTGCAGATTGTTGAGTTTTACCTGATCCTAGCAGCGATGACAGCTGTAGCGACCGGATTATTCTGGCGTTTGTTGGTAGCGTCATTGGTTATGTTGATCGCAGGATATCTGGGTGAAGTTAACAGCGACAATTCTACCGCTCTTTGGGTCCTTTTCATTGTTGGCATGGCAGGCTGGCTGTATATTCTCTACGAAATTTTTGCTGGAGAAGCGAGCCGCATTAACGCTAGCGAAGGTACTGTCGCAGGACAAAAAGCATTCAATGCTCTGCGTCTTATTGTAACAGTT LLTVPLQIVEFYLILAAMTAVATGLFWRLLVASLVMLIAGYLGEVNSDNSTALWVLFIVGMAGWLYILYEIFAGEASRINASEGTVAGQKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTGACGGTGCCGTTGCAGATTGTTGAGTTTTACCTGATCCTAGCAGCG---------ATG---ACAGCTGTAGCGACC---GGATTA------------------------------------TTCTGGCGT---TTGTTGGTAGCGTCATTGGTTATGTTGATCGCAGGATATCTGGGTGAA---------GTT------------------AAC------AGC---------------------------------GAC------------------------------------------------------------------AATTCT---------ACCGCTCTTTGGGTCCTT---TTCATTGTTGGCATGGCAGGCTGGCTGTATATTCTCTACGAAATT---------------TTT------GCT---GGAGAAGCGAGCCGCATTAACGCTAGC------GAA---GGTACTGTCGCAGGA---CAA---AAA---GCA---TTC---AAT---GCTCTG---CGTCTTATTGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---M-TAVAT-GL------------FWR-LLVASLVMLIAGYLGE---V------N--S-----------D----------------------NS---TALWVL-FIVGMAGWLYILYEI-----F--A-GEASRINAS--E-GTVAG-Q-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ928112 [unk-Proteo2-a] PRGD_OTU024_c1eb026b53bc0b3510f954a2333d4875 gb|KJ928112| PRGD_OTU024_c1eb026b53bc0b3510f954a2333d4875, putative proteorhodopsin gene, partial cds. PRGD_OTU024_c1eb026b53bc0b3510f954a2333d4875, putative proteorhodopsin gene, partial cds. KJ928112 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTTTGACGGTGCCGTTGCAGATTGTTGAGTTTTACCTGATCCTAGCAGCGATGACAGCAGTAGCGACCGGATTATTCTGGCGTTTGTTGGTAGCGTCATTGGTCATGTTGATCGCAGGATATCTAGGTGAAGTAAACAGCGACAATTCTACCGCGCTTTGGGTCCTTTTCATTGTTGGCATGGCAGGCTGGCTGTATATTCTCTACGAAATTTTTGCTGGAGAAGCGAGCCGCATTAATGCTAGCGAAGGTACTGTCGCAGGACAAAAAGCATTTAATGCTCTGCGTCTTATTGTAACAGTT LLTVPLQIVEFYLILAAMTAVATGLFWRLLVASLVMLIAGYLGEVNSDNSTALWVLFIVGMAGWLYILYEIFAGEASRINASEGTVAGQKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTGACGGTGCCGTTGCAGATTGTTGAGTTTTACCTGATCCTAGCAGCG---------ATG---ACAGCAGTAGCGACC---GGATTA------------------------------------TTCTGGCGT---TTGTTGGTAGCGTCATTGGTCATGTTGATCGCAGGATATCTAGGTGAA---------GTA------------------AAC------AGC---------------------------------GAC------------------------------------------------------------------AATTCT---------ACCGCGCTTTGGGTCCTT---TTCATTGTTGGCATGGCAGGCTGGCTGTATATTCTCTACGAAATT---------------TTT------GCT---GGAGAAGCGAGCCGCATTAATGCTAGC------GAA---GGTACTGTCGCAGGA---CAA---AAA---GCA---TTT---AAT---GCTCTG---CGTCTTATTGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---M-TAVAT-GL------------FWR-LLVASLVMLIAGYLGE---V------N--S-----------D----------------------NS---TALWVL-FIVGMAGWLYILYEI-----F--A-GEASRINAS--E-GTVAG-Q-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ928118 [unk-Proteo2-a] PRGD_OTU024_ed044c23f2219a701fed37b4b8a2c326 gb|KJ928118| PRGD_OTU024_ed044c23f2219a701fed37b4b8a2c326, putative proteorhodopsin gene, partial cds. PRGD_OTU024_ed044c23f2219a701fed37b4b8a2c326, putative proteorhodopsin gene, partial cds. KJ928118 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTTTTGACGGTGCCGCTGCAGATTGTTGAGTTTTACCTGATTCTAGCAGCGATGACAGCGGTAGCTACCGGATTATTCTGGCGTTTGTTGGTAGCGTCATTGGTTATGTTGATCGCAGGATATCTGGGTGAGGTTAATAGCGACAATTCTACGGCTCTTTGGGTCCTTTTCATTGTTGGCATGGCAGGCTGGCTGTATATTCTCTACGAAATTTTTGCCGGAGAAGCGAGCCGCATTAATGCTAGCGAAGGTACTGTAGCAGGACAAAAAGCATTCAATGCTTTACGTCTTATTGTAACAGTT LLTVPLQIVEFYLILAAMTAVATGLFWRLLVASLVMLIAGYLGEVNSDNSTALWVLFIVGMAGWLYILYEIFAGEASRINASEGTVAGQKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTGACGGTGCCGCTGCAGATTGTTGAGTTTTACCTGATTCTAGCAGCG---------ATG---ACAGCGGTAGCTACC---GGATTA------------------------------------TTCTGGCGT---TTGTTGGTAGCGTCATTGGTTATGTTGATCGCAGGATATCTGGGTGAG---------GTT------------------AAT------AGC---------------------------------GAC------------------------------------------------------------------AATTCT---------ACGGCTCTTTGGGTCCTT---TTCATTGTTGGCATGGCAGGCTGGCTGTATATTCTCTACGAAATT---------------TTT------GCC---GGAGAAGCGAGCCGCATTAATGCTAGC------GAA---GGTACTGTAGCAGGA---CAA---AAA---GCA---TTC---AAT---GCTTTA---CGTCTTATTGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---M-TAVAT-GL------------FWR-LLVASLVMLIAGYLGE---V------N--S-----------D----------------------NS---TALWVL-FIVGMAGWLYILYEI-----F--A-GEASRINAS--E-GTVAG-Q-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ928090 [unk-Proteo2-a] PRGD_OTU024_2cc1471c26e87776b0cccfd7e67af0d6 gb|KJ928090| PRGD_OTU024_2cc1471c26e87776b0cccfd7e67af0d6, putative proteorhodopsin gene, partial cds. PRGD_OTU024_2cc1471c26e87776b0cccfd7e67af0d6, putative proteorhodopsin gene, partial cds. KJ928090 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) CTTTTGACGGTGCCGCTTCAGATTGTTGAGTTTTATTTGATCCTAGCAGCAATGACCGCGGTAGCGACCGGTTTATTCTGGCGTTTGTTGGTAGCATCATTGGTTATGTTGATCGCAGGATATCTGGGCGAAGTTAACAGCGATAATTCTACGGCTCTTTGGGTCCTTTTCGTTATTGGCATGGCAGGCTGGCTCTACATTCTCTACGAGATTTTTGCTGGAGAAGCGAGCCGTATCAATGCTAGCGAAGGGACGGTCGCAGGTCAAAAAGCATTCAATGCTCTGCGTCTTATTGTAACAGTC LLTVPLQIVEFYLILAAMTAVATGLFWRLLVASLVMLIAGYLGEVNSDNSTALWVLFVIGMAGWLYILYEIFAGEASRINASEGTVAGQKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTGACGGTGCCGCTTCAGATTGTTGAGTTTTATTTGATCCTAGCAGCA---------ATG---ACCGCGGTAGCGACC---GGTTTA------------------------------------TTCTGGCGT---TTGTTGGTAGCATCATTGGTTATGTTGATCGCAGGATATCTGGGCGAA---------GTT------------------AAC------AGC---------------------------------GAT------------------------------------------------------------------AATTCT---------ACGGCTCTTTGGGTCCTT---TTCGTTATTGGCATGGCAGGCTGGCTCTACATTCTCTACGAGATT---------------TTT------GCT---GGAGAAGCGAGCCGTATCAATGCTAGC------GAA---GGGACGGTCGCAGGT---CAA---AAA---GCA---TTC---AAT---GCTCTG---CGTCTTATTGTAACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---M-TAVAT-GL------------FWR-LLVASLVMLIAGYLGE---V------N--S-----------D----------------------NS---TALWVL-FVIGMAGWLYILYEI-----F--A-GEASRINAS--E-GTVAG-Q-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ928101 [unk-Proteo2-a] PRGD_OTU024_692312222fb7c1ac18953f6607a20871 gb|KJ928101| PRGD_OTU024_692312222fb7c1ac18953f6607a20871, putative proteorhodopsin gene, partial cds. PRGD_OTU024_692312222fb7c1ac18953f6607a20871, putative proteorhodopsin gene, partial cds. KJ928101 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTTTGACAGTGCCGCTGCAAATTGTCGAGTTCTATTTAATTCTCGCAGCGATGACCGCGGTTGCCACCGGATTATTCTGGCGTTTGTTGGTAGCATCTTTGGTTATGCTTATTGCAGGATATTTGGGTGAGGTTAATAGTGCCAATACTACGGCCCTATGGGTTCTTTTCGTTATTGGTATGGCGGGCTGGCTTTATATTCTCTACGAGATATTTGCCGGTGAAGCGAGCCGCATTAATGCTAGCGAAGGCACAGTCGCAGGCCAAAAGGCATTTAATGCTCTGCGTCTCATCGTGACAGTT LLTVPLQIVEFYLILAAMTAVATGLFWRLLVASLVMLIAGYLGEVNSANTTALWVLFVIGMAGWLYILYEIFAGEASRINASEGTVAGQKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTGACAGTGCCGCTGCAAATTGTCGAGTTCTATTTAATTCTCGCAGCG---------ATG---ACCGCGGTTGCCACC---GGATTA------------------------------------TTCTGGCGT---TTGTTGGTAGCATCTTTGGTTATGCTTATTGCAGGATATTTGGGTGAG---------GTT------------------AAT------AGT---------------------------------GCC------------------------------------------------------------------AATACT---------ACGGCCCTATGGGTTCTT---TTCGTTATTGGTATGGCGGGCTGGCTTTATATTCTCTACGAGATA---------------TTT------GCC---GGTGAAGCGAGCCGCATTAATGCTAGC------GAA---GGCACAGTCGCAGGC---CAA---AAG---GCA---TTT---AAT---GCTCTG---CGTCTCATCGTGACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---M-TAVAT-GL------------FWR-LLVASLVMLIAGYLGE---V------N--S-----------A----------------------NT---TALWVL-FVIGMAGWLYILYEI-----F--A-GEASRINAS--E-GTVAG-Q-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ928113 [unk-Proteo2-a] PRGD_OTU024_c3f8fb44e3dbadb4cba676fb40b6d5d5 gb|KJ928113| PRGD_OTU024_c3f8fb44e3dbadb4cba676fb40b6d5d5, putative proteorhodopsin gene, partial cds. PRGD_OTU024_c3f8fb44e3dbadb4cba676fb40b6d5d5, putative proteorhodopsin gene, partial cds. KJ928113 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGCTAACTGTCCCGCTACAGATTGTTGAGTTCTACCTCATCCTGGCTGCAATGACGGCCGTTGCGACCGGATTGTTTTGGCGGCTACTCGTCGCCTCTTTGGTGATGCTGATTGCTGGTTATCTCGGTGAGGTAAATAGCGCCAATCCAACGGCACTGTGGGGATTCTTCATCGTTGGTATGGCTGGCTGGATTTACATCCTGTACGAAATCTTCGCAGGCGAAGCGAGCCGCATTAATGCAAGTGAAGGCACTGTCGCTGGCCAGAAGGCTTTCGGGGCACTGCGTTTGATAGTCACCGTC LLTVPLQIVEFYLILAAMTAVATGLFWRLLVASLVMLIAGYLGEVNSANPTALWGFFIVGMAGWIYILYEIFAGEASRINASEGTVAGQKAFGALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTAACTGTCCCGCTACAGATTGTTGAGTTCTACCTCATCCTGGCTGCA---------ATG---ACGGCCGTTGCGACC---GGATTG------------------------------------TTTTGGCGG---CTACTCGTCGCCTCTTTGGTGATGCTGATTGCTGGTTATCTCGGTGAG---------GTA------------------AAT------AGC---------------------------------GCC------------------------------------------------------------------AATCCA---------ACGGCACTGTGGGGATTC---TTCATCGTTGGTATGGCTGGCTGGATTTACATCCTGTACGAAATC---------------TTC------GCA---GGCGAAGCGAGCCGCATTAATGCAAGT------GAA---GGCACTGTCGCTGGC---CAG---AAG---GCT---TTC---GGG---GCACTG---CGTTTGATAGTCACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---M-TAVAT-GL------------FWR-LLVASLVMLIAGYLGE---V------N--S-----------A----------------------NP---TALWGF-FIVGMAGWIYILYEI-----F--A-GEASRINAS--E-GTVAG-Q-K-A-F-G-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ928116 [unk-Proteo2-a] PRGD_OTU024_e0d6074d33aeb89e5d0425fa7e38edde gb|KJ928116| PRGD_OTU024_e0d6074d33aeb89e5d0425fa7e38edde, putative proteorhodopsin gene, partial cds. PRGD_OTU024_e0d6074d33aeb89e5d0425fa7e38edde, putative proteorhodopsin gene, partial cds. KJ928116 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683) TTGCTAACTGTCCCGCTGCAGATTGTTGAGTTCTACCTCATTCTGGCTGCAATGACGGCCGTTGCGACCGGATTGTTTTGGCGGCTACTCGTCGCCTCTTTGGTGATGCTGATTGCTGGTTATCTCGGTGAGGTAAATAGCGCCAATCCAACGGCACTGTGGGCATTCTTCATCATTGGTATGGCTGGCTGGATTTACATCCTGTACGAAATCTTCGCAGGCGAAGCGAGCCGCATTAATGCAAGTGAAGGCACTGTCGCTGGCCAGAAAGCTTTTCGGGCACTGCGTTTGATAGTCACAGTC LLTVPLQIVEFYLILAAMTAVATGLFWRLLVASLVMLIAGYLGEVNSANPTALWAFFIIGMAGWIYILYEIFAGEASRINASEGTVAGQKAFRALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTAACTGTCCCGCTGCAGATTGTTGAGTTCTACCTCATTCTGGCTGCA---------ATG---ACGGCCGTTGCGACC---GGATTG------------------------------------TTTTGGCGG---CTACTCGTCGCCTCTTTGGTGATGCTGATTGCTGGTTATCTCGGTGAG---------GTA------------------AAT------AGC---------------------------------GCC------------------------------------------------------------------AATCCA---------ACGGCACTGTGGGCATTC---TTCATCATTGGTATGGCTGGCTGGATTTACATCCTGTACGAAATC---------------TTC------GCA---GGCGAAGCGAGCCGCATTAATGCAAGT------GAA---GGCACTGTCGCTGGC---CAG---AAA---GCT---TTT---CGG---GCACTG---CGTTTGATAGTCACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---M-TAVAT-GL------------FWR-LLVASLVMLIAGYLGE---V------N--S-----------A----------------------NP---TALWAF-FIIGMAGWIYILYEI-----F--A-GEASRINAS--E-GTVAG-Q-K-A-F-R-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ928087 [unk-Proteo2-a] PRGD_OTU024_1a39c8b0b5725b508bf93a6e92171266 gb|KJ928087| PRGD_OTU024_1a39c8b0b5725b508bf93a6e92171266, putative proteorhodopsin gene, partial cds. PRGD_OTU024_1a39c8b0b5725b508bf93a6e92171266, putative proteorhodopsin gene, partial cds. KJ928087 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.935 18.508 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGCTGACGGTGCCGCTGCAAATCGTCGAATTCTATCTCATCCTGGCGGCGATGACCGCTGTCGCGACCGGCCTGTTCTGGCGTTTGTTGATCGCTTCGTTGGTCATGTTGATCGCGGGCTATCTGGGTGAGGTGAACTACGAGAACGCCACCGCGCTGTGGGTGTTATTCATCATCGGCATGGCTGGCTGGATTTACATCATCTATGAAATCTTCGCCGGTGAAGCCAGCCGCATCAATGCGAGCGAAGGCACCGTTGCCGGTCAGAAAGCGTTTAACGCGCTGCGCCTGATCGTCACCGTG LLTVPLQIVEFYLILAAMTAVATGLFWRLLIASLVMLIAGYLGEVNYENATALWVLFIIGMAGWIYIIYEIFAGEASRINASEGTVAGQKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTGACGGTGCCGCTGCAAATCGTCGAATTCTATCTCATCCTGGCGGCG---------ATG---ACCGCTGTCGCGACC---GGCCTG------------------------------------TTCTGGCGT---TTGTTGATCGCTTCGTTGGTCATGTTGATCGCGGGCTATCTGGGTGAG---------GTG------------------AAC------TAC---------------------------------GAG------------------------------------------------------------------AACGCC---------ACCGCGCTGTGGGTGTTA---TTCATCATCGGCATGGCTGGCTGGATTTACATCATCTATGAAATC---------------TTC------GCC---GGTGAAGCCAGCCGCATCAATGCGAGC------GAA---GGCACCGTTGCCGGT---CAG---AAA---GCG---TTT---AAC---GCGCTG---CGCCTGATCGTCACCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---M-TAVAT-GL------------FWR-LLIASLVMLIAGYLGE---V------N--Y-----------E----------------------NA---TALWVL-FIIGMAGWIYIIYEI-----F--A-GEASRINAS--E-GTVAG-Q-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ928108 [unk-Proteo2-a] PRGD_OTU024_9061996144772b67be09ff4a84587188 gb|KJ928108| PRGD_OTU024_9061996144772b67be09ff4a84587188, putative proteorhodopsin gene, partial cds. PRGD_OTU024_9061996144772b67be09ff4a84587188, putative proteorhodopsin gene, partial cds. KJ928108 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.935 18.508 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683), Mediterranean Sea (33.935, 18.508), Indian Ocean (-14.48, 113.45) TTGCTGACGGTGCCGCTGCAAATCGTCGAATTCTATCTCATCCTGGCGGCGATGACCGCTGTCGCGACCGGCCTGTTCTGGCGTTTGTTGATCGCTTCGTTGGTCATGTTGATCGCGGGTTATCTGGGTGAGGTGAACTACGAGAACGCCACCGCGCTGTGGGTGCTGTTCATCATCGGCATGGCTGGCTGGATTTACATCATCTATGAAATCTTCGCCGGTGAAGCCAGCCGCATCAATGCGAGCGAAGGCACCGTTGCCGGTCAGAAAGCGTTTAACGCGCTGCGCCTGATCGTCACCGTG LLTVPLQIVEFYLILAAMTAVATGLFWRLLIASLVMLIAGYLGEVNYENATALWVLFIIGMAGWIYIIYEIFAGEASRINASEGTVAGQKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTGACGGTGCCGCTGCAAATCGTCGAATTCTATCTCATCCTGGCGGCG---------ATG---ACCGCTGTCGCGACC---GGCCTG------------------------------------TTCTGGCGT---TTGTTGATCGCTTCGTTGGTCATGTTGATCGCGGGTTATCTGGGTGAG---------GTG------------------AAC------TAC---------------------------------GAG------------------------------------------------------------------AACGCC---------ACCGCGCTGTGGGTGCTG---TTCATCATCGGCATGGCTGGCTGGATTTACATCATCTATGAAATC---------------TTC------GCC---GGTGAAGCCAGCCGCATCAATGCGAGC------GAA---GGCACCGTTGCCGGT---CAG---AAA---GCG---TTT---AAC---GCGCTG---CGCCTGATCGTCACCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---M-TAVAT-GL------------FWR-LLIASLVMLIAGYLGE---V------N--Y-----------E----------------------NA---TALWVL-FIIGMAGWIYIIYEI-----F--A-GEASRINAS--E-GTVAG-Q-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ928093 [unk-Proteo2-a] PRGD_OTU024_364bd76d95e29b71a47296ae80c5ab0c gb|KJ928093| PRGD_OTU024_364bd76d95e29b71a47296ae80c5ab0c, putative proteorhodopsin gene, partial cds. PRGD_OTU024_364bd76d95e29b71a47296ae80c5ab0c, putative proteorhodopsin gene, partial cds. KJ928093 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTGCTGACCGTTCCGCTCCAGATCATTGAATTCTACTTGATCCTGGCCGCTATCGCCGCAGTCGCCACAGGTCTTTTCTGGCGTTTGCTGATCGCTTCTTTGGTCATGTTGGTCGCTGGTTACCTGGGCGAAGTGAATGCTGCCAACCCAACAGCTCTGTGGGTATTCTTCATCATCGGTATGGCCGGCTGGATTTACATCATCTACGAAATCTTCGCGGGTGAAGCGAGCCAGATCAGCGCCAGCCAAGGCACCGTTGCATCACAGCAAGCATTTAATGCCTTGCGTTTGATCGTAACCGTT LLTVPLQIIEFYLILAAIAAVATGLFWRLLIASLVMLVAGYLGEVNAANPTALWVFFIIGMAGWIYIIYEIFAGEASQISASQGTVASQQAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTGACCGTTCCGCTCCAGATCATTGAATTCTACTTGATCCTGGCCGCT---------ATC---GCCGCAGTCGCCACA---GGTCTT------------------------------------TTCTGGCGT---TTGCTGATCGCTTCTTTGGTCATGTTGGTCGCTGGTTACCTGGGCGAA---------GTG------------------AAT------GCT---------------------------------GCC------------------------------------------------------------------AACCCA---------ACAGCTCTGTGGGTATTC---TTCATCATCGGTATGGCCGGCTGGATTTACATCATCTACGAAATC---------------TTC------GCG---GGTGAAGCGAGCCAGATCAGCGCCAGC------CAA---GGCACCGTTGCATCA---CAG---CAA---GCA---TTT---AAT---GCCTTG---CGTTTGATCGTAACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AAVAT-GL------------FWR-LLIASLVMLVAGYLGE---V------N--A-----------A----------------------NP---TALWVF-FIIGMAGWIYIIYEI-----F--A-GEASQISAS--Q-GTVAS-Q-Q-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ928103 [unk-Proteo2-a] PRGD_OTU024_76354f5baa343b3668bd623a484dca86 gb|KJ928103| PRGD_OTU024_76354f5baa343b3668bd623a484dca86, putative proteorhodopsin gene, partial cds. PRGD_OTU024_76354f5baa343b3668bd623a484dca86, putative proteorhodopsin gene, partial cds. KJ928103 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTGCTGACCGTTCCGCTCCAGATCATTGAATTCTACTTGATCCTGGCCGCTATCGCCGCAGTCGCCACAGGTCTTTTCTGGCGTTTGCTGATCGCTTCTTTGGTCATGTTGGTCGCTGGTTACCTGGGCGAAGTGAATGCTGCCAACCCAACAGCTCTGTGGGTATTCTTCATCATCGGCATGGCCGGCTGGATTTACATCATCTACGAAATTTTCGCGGGTGAAGCGAGCCAGATCAGTGCCAGCCAAGGCACCGTTGCATCACAGCAAGCATTTAATGCCTTGCGTTTGATCGTAACCGTT LLTVPLQIIEFYLILAAIAAVATGLFWRLLIASLVMLVAGYLGEVNAANPTALWVFFIIGMAGWIYIIYEIFAGEASQISASQGTVASQQAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTGACCGTTCCGCTCCAGATCATTGAATTCTACTTGATCCTGGCCGCT---------ATC---GCCGCAGTCGCCACA---GGTCTT------------------------------------TTCTGGCGT---TTGCTGATCGCTTCTTTGGTCATGTTGGTCGCTGGTTACCTGGGCGAA---------GTG------------------AAT------GCT---------------------------------GCC------------------------------------------------------------------AACCCA---------ACAGCTCTGTGGGTATTC---TTCATCATCGGCATGGCCGGCTGGATTTACATCATCTACGAAATT---------------TTC------GCG---GGTGAAGCGAGCCAGATCAGTGCCAGC------CAA---GGCACCGTTGCATCA---CAG---CAA---GCA---TTT---AAT---GCCTTG---CGTTTGATCGTAACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AAVAT-GL------------FWR-LLIASLVMLVAGYLGE---V------N--A-----------A----------------------NP---TALWVF-FIIGMAGWIYIIYEI-----F--A-GEASQISAS--Q-GTVAS-Q-Q-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ928106 [unk-Proteo2-a] PRGD_OTU024_8837f0534e3937671e67f7cbe6f44f7b gb|KJ928106| PRGD_OTU024_8837f0534e3937671e67f7cbe6f44f7b, putative proteorhodopsin gene, partial cds. PRGD_OTU024_8837f0534e3937671e67f7cbe6f44f7b, putative proteorhodopsin gene, partial cds. KJ928106 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGCTGACCGTTCCGCTCCAGATCATTGAATTCTACTTGATCCTGGCCGCTATCGCTGCAGTCGCCACAGGTCTTTTCTGGCGTTTGCTGATCGCTTCTTTGGTTATGTTGGTCGCTGGTTACCTGGGAGAAGTGAATGCTGCCAACCCAACAGCGCTGTGGGTATTCTTCGTCATTGGTATGGCCGGCTGGATTTACATCATCTACGAAATCTTCGCGGGTGAAGCGAGCCAGATCAGCGCTAGTCAAGGTACCGTTGCATCACAGCAAGCATTTAACGCCTTGCGTTTGATCGTAACCGTT LLTVPLQIIEFYLILAAIAAVATGLFWRLLIASLVMLVAGYLGEVNAANPTALWVFFVIGMAGWIYIIYEIFAGEASQISASQGTVASQQAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTGACCGTTCCGCTCCAGATCATTGAATTCTACTTGATCCTGGCCGCT---------ATC---GCTGCAGTCGCCACA---GGTCTT------------------------------------TTCTGGCGT---TTGCTGATCGCTTCTTTGGTTATGTTGGTCGCTGGTTACCTGGGAGAA---------GTG------------------AAT------GCT---------------------------------GCC------------------------------------------------------------------AACCCA---------ACAGCGCTGTGGGTATTC---TTCGTCATTGGTATGGCCGGCTGGATTTACATCATCTACGAAATC---------------TTC------GCG---GGTGAAGCGAGCCAGATCAGCGCTAGT------CAA---GGTACCGTTGCATCA---CAG---CAA---GCA---TTT---AAC---GCCTTG---CGTTTGATCGTAACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AAVAT-GL------------FWR-LLIASLVMLVAGYLGE---V------N--A-----------A----------------------NP---TALWVF-FVIGMAGWIYIIYEI-----F--A-GEASQISAS--Q-GTVAS-Q-Q-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ928102 [unk-Proteo2-a] PRGD_OTU024_7458dc2edd0546a356ec313c3e9abca5 gb|KJ928102| PRGD_OTU024_7458dc2edd0546a356ec313c3e9abca5, putative proteorhodopsin gene, partial cds. PRGD_OTU024_7458dc2edd0546a356ec313c3e9abca5, putative proteorhodopsin gene, partial cds. KJ928102 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCTTGACGGTGCCATTGCAGATCATTGAATTCTACTTGATCTTGGCGGCGATCGCCGTTGTTGCGACAGGTCTTTTCTGGCGTCTCTTGATCGCATCTTTGGTCATGTTGATTGCTGGTTACCTTGGTGAGGTGAATGCTGCCAACCCAACCGCGCTTTGGGTGTTCTTCATCATTGGTATGGCCGGCTGGATCTACATCATCTACGAAATCTTCGCAGGTGAAGCGAGCCAGATCAGCGCCAGCCAAGGTACCGTTGCATCACAGCAAGCCTTCAATGCGCTGCGCTTGATCGTGACGGTT LLTVPLQIIEFYLILAAIAVVATGLFWRLLIASLVMLIAGYLGEVNAANPTALWVFFIIGMAGWIYIIYEIFAGEASQISASQGTVASQQAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTGACGGTGCCATTGCAGATCATTGAATTCTACTTGATCTTGGCGGCG---------ATC---GCCGTTGTTGCGACA---GGTCTT------------------------------------TTCTGGCGT---CTCTTGATCGCATCTTTGGTCATGTTGATTGCTGGTTACCTTGGTGAG---------GTG------------------AAT------GCT---------------------------------GCC------------------------------------------------------------------AACCCA---------ACCGCGCTTTGGGTGTTC---TTCATCATTGGTATGGCCGGCTGGATCTACATCATCTACGAAATC---------------TTC------GCA---GGTGAAGCGAGCCAGATCAGCGCCAGC------CAA---GGTACCGTTGCATCA---CAG---CAA---GCC---TTC---AAT---GCGCTG---CGCTTGATCGTGACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVAT-GL------------FWR-LLIASLVMLIAGYLGE---V------N--A-----------A----------------------NP---TALWVF-FIIGMAGWIYIIYEI-----F--A-GEASQISAS--Q-GTVAS-Q-Q-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ929530 [unk-Proteo2-a] PRGD_OTU146_otuREP_22112041417137da513a6f003486bd35 gb|KJ929530| PRGD_OTU146_otuREP_22112041417137da513a6f003486bd35, putative proteorhodopsin gene, partial cds. PRGD_OTU146_otuREP_22112041417137da513a6f003486bd35, putative proteorhodopsin gene, partial cds. KJ929530 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGCTGACAGTTCCGTTGCAGATCGTCGAGTTCTACTTGATTCTGACTGCGATTGCTGTGGTTGGCGCTTCTCTGTTCTGGCGTTTGTTAATTGCTTCCGTAGTGATGCTGCTGGCAGGTTTCATTGGTGAAACCAACATTGCCAACGGTGGCCTGCTTTGGGGCGGTTTCATCGTCGGTACGGCAGCTTGGGTATACATCATCTACGAAATCTTCGCGGGTGAAGCATCCAAGATCAACTCTTCCGAGGGAACCAAAGCGTCCAAGTCCGCGTTCAACGCATTGCGTTGGATTGTAACGGTC LLTVPLQIVEFYLILTAIAVVGASLFWRLLIASVVMLLAGFIGETNIANGGLLWGGFIVGTAAWVYIIYEIFAGEASKINSSEGTKASKSAFNALRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTGACAGTTCCGTTGCAGATCGTCGAGTTCTACTTGATTCTGACTGCG---------ATT---GCTGTGGTTGGCGCT---TCTCTG------------------------------------TTCTGGCGT---TTGTTAATTGCTTCCGTAGTGATGCTGCTGGCAGGTTTCATTGGTGAA---------ACC------------------AAC------ATT---------------------------------GCC------------------------------------------------------------------AACGGT---------GGCCTGCTTTGGGGCGGT---TTCATCGTCGGTACGGCAGCTTGGGTATACATCATCTACGAAATC---------------TTC------GCG---GGTGAAGCATCCAAGATCAACTCTTCC------GAG---GGAACCAAAGCGTCC---AAG---TCC---GCG---TTC---AAC---GCATTG---CGTTGGATTGTAACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILTA---I-AVVGA-SL------------FWR-LLIASVVMLLAGFIGE---T------N--I-----------A----------------------NG---GLLWGG-FIVGTAAWVYIIYEI-----F--A-GEASKINSS--E-GTKAS-K-S-A-F-N-AL-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ929533 [unk-Proteo2-a] PRGD_OTU146_fc93fb0e4e092d9c9a7928d45cbc58a8 gb|KJ929533| PRGD_OTU146_fc93fb0e4e092d9c9a7928d45cbc58a8, putative proteorhodopsin gene, partial cds. PRGD_OTU146_fc93fb0e4e092d9c9a7928d45cbc58a8, putative proteorhodopsin gene, partial cds. KJ929533 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683) TTGCTGACAGTTCCGTTGCAGATCGTCGAGTTCTACTTGATTCTGACTGCGATTGCTGTGGTCGGCGCTTCTCTGTTCTGGCGCTTGTTAATTGCTTCCGTAGTGATGCTGCTGGCAGGTTTCATTGGTGAAACTAACATTGCCAACGGTGGCCTGCTCTGGGGCGGTTTCATCGTCGGCACGGCAGCTTGGATATATATCATCTACGAAATCTTCGCGGGTGAAGCATCCAAGATCAACTCTTCCGAGGGAACCAAAGCGTCCAAGTCCGCGTTCAACGCATTGCGTTGGATTGTAACGGTC LLTVPLQIVEFYLILTAIAVVGASLFWRLLIASVVMLLAGFIGETNIANGGLLWGGFIVGTAAWIYIIYEIFAGEASKINSSEGTKASKSAFNALRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTGACAGTTCCGTTGCAGATCGTCGAGTTCTACTTGATTCTGACTGCG---------ATT---GCTGTGGTCGGCGCT---TCTCTG------------------------------------TTCTGGCGC---TTGTTAATTGCTTCCGTAGTGATGCTGCTGGCAGGTTTCATTGGTGAA---------ACT------------------AAC------ATT---------------------------------GCC------------------------------------------------------------------AACGGT---------GGCCTGCTCTGGGGCGGT---TTCATCGTCGGCACGGCAGCTTGGATATATATCATCTACGAAATC---------------TTC------GCG---GGTGAAGCATCCAAGATCAACTCTTCC------GAG---GGAACCAAAGCGTCC---AAG---TCC---GCG---TTC---AAC---GCATTG---CGTTGGATTGTAACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILTA---I-AVVGA-SL------------FWR-LLIASVVMLLAGFIGE---T------N--I-----------A----------------------NG---GLLWGG-FIVGTAAWIYIIYEI-----F--A-GEASKINSS--E-GTKAS-K-S-A-F-N-AL-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ929531 [unk-Proteo2-a] PRGD_OTU146_027cbfd5e6469b551af0da4186d5da14 gb|KJ929531| PRGD_OTU146_027cbfd5e6469b551af0da4186d5da14, putative proteorhodopsin gene, partial cds. PRGD_OTU146_027cbfd5e6469b551af0da4186d5da14, putative proteorhodopsin gene, partial cds. KJ929531 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) TTGCTGACGGTTCCGTTGCAGATCGTAGAATTCTACCTGATTCTGACGGCGATTGCTGTGGTTGGCGCTTCTCTGTTCTGGCGTTTGCTCATCGCATCCGTAGTCATGCTGTTGGCAGGTTTCGTTGGCGAAACCAACATCGCCAATGGTGGCCTGCTGTGGGGTGGTTTCATCGTCGGTACAGCGGCTTGGGTTTACATCATCTACGAAATCTTCGCGGGTGAAGCATCCAAGATCAACGCTTCTCAGGGTACTCAAGCGTCCAAGTCCGCATTCAACGCACTGCGTTGGATTGTAACGGTT LLTVPLQIVEFYLILTAIAVVGASLFWRLLIASVVMLLAGFVGETNIANGGLLWGGFIVGTAAWVYIIYEIFAGEASKINASQGTQASKSAFNALRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTGACGGTTCCGTTGCAGATCGTAGAATTCTACCTGATTCTGACGGCG---------ATT---GCTGTGGTTGGCGCT---TCTCTG------------------------------------TTCTGGCGT---TTGCTCATCGCATCCGTAGTCATGCTGTTGGCAGGTTTCGTTGGCGAA---------ACC------------------AAC------ATC---------------------------------GCC------------------------------------------------------------------AATGGT---------GGCCTGCTGTGGGGTGGT---TTCATCGTCGGTACAGCGGCTTGGGTTTACATCATCTACGAAATC---------------TTC------GCG---GGTGAAGCATCCAAGATCAACGCTTCT------CAG---GGTACTCAAGCGTCC---AAG---TCC---GCA---TTC---AAC---GCACTG---CGTTGGATTGTAACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILTA---I-AVVGA-SL------------FWR-LLIASVVMLLAGFVGE---T------N--I-----------A----------------------NG---GLLWGG-FIVGTAAWVYIIYEI-----F--A-GEASKINAS--Q-GTQAS-K-S-A-F-N-AL-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ929820 [unk-Proteo2-a] PRGD_OTU271_otuREP_271861bd35efb6eeb890bc8c460c00a3 gb|KJ929820| PRGD_OTU271_otuREP_271861bd35efb6eeb890bc8c460c00a3, putative proteorhodopsin gene, partial cds. PRGD_OTU271_otuREP_271861bd35efb6eeb890bc8c460c00a3, putative proteorhodopsin gene, partial cds. KJ929820 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) CTACTAACGGTACCACTACAGATCGTTGAATTCTATCTAATCTTAGCTGCAATTGCAGTGGTTCGTGTTGCTCTATTCTGGCGCTTGTTGATCGCTTCATTAGTGATGCTAGTACTGGGTTATGTTGGCGAAACTAACACTGATAGTGGCACGCTACTATGGGGTGGCTTCATTATCGGTACAGCTGCATGGCTATACATCATCTACGAGATTTTTGCAGGCGAGGCATCAGAAATTAACGCATCGCAAGGCACTAAGTCTTCGCAGATGGCTTTCAACACCCTGAAATGGATTGTTACAGTC LLTVPLQIVEFYLILAAIAVVRVALFWRLLIASLVMLVLGYVGETNTDSGTLLWGGFIIGTAAWLYIIYEIFAGEASEINASQGTKSSQMAFNTLKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTAACGGTACCACTACAGATCGTTGAATTCTATCTAATCTTAGCTGCA---------ATT---GCAGTGGTTCGTGTT---GCTCTA------------------------------------TTCTGGCGC---TTGTTGATCGCTTCATTAGTGATGCTAGTACTGGGTTATGTTGGCGAA---------ACT------------------AAC------ACT---------------------------------GAT------------------------------------------------------------------AGTGGC---------ACGCTACTATGGGGTGGC---TTCATTATCGGTACAGCTGCATGGCTATACATCATCTACGAGATT---------------TTT------GCA---GGCGAGGCATCAGAAATTAACGCATCG------CAA---GGCACTAAGTCTTCG---CAG---ATG---GCT---TTC---AAC---ACCCTG---AAATGGATTGTTACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVRV-AL------------FWR-LLIASLVMLVLGYVGE---T------N--T-----------D----------------------SG---TLLWGG-FIIGTAAWLYIIYEI-----F--A-GEASEINAS--Q-GTKSS-Q-M-A-F-N-TL-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ929824 [unk-Proteo2-a] PRGD_OTU275_otuREP_461b40c7cad05cb22e2e827b769c4f1e gb|KJ929824| PRGD_OTU275_otuREP_461b40c7cad05cb22e2e827b769c4f1e, putative proteorhodopsin gene, partial cds. PRGD_OTU275_otuREP_461b40c7cad05cb22e2e827b769c4f1e, putative proteorhodopsin gene, partial cds. KJ929824 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508) TTGCTGACCGTTCCGCTGCAGATTGTTGAATTCTATCTGATCCTGGCGGCGATTGCTGTGGTTGGTGCGTCGCTGTTCTGGCGTCTGCTGATCGCGTCTATCGTGATGCTGGTCGCCGGTTACCTGGGCGAAGTAAACACCGACAGCGGCGCGCTGCTGTGGGGTGGCTTCATCGTCGGTACCGCGGCATGGCTGTACATCATCTACGAAATCTTCGCGGGTGAGGCATCCAAGATCAACGCCGAGCAAGGCACCGCTTCGTCCAAGATGGCCTTCAACGCCATGCGTTGGATTGTAACCGTT LLTVPLQIVEFYLILAAIAVVGASLFWRLLIASIVMLVAGYLGEVNTDSGALLWGGFIVGTAAWLYIIYEIFAGEASKINAEQGTASSKMAFNAMRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTGACCGTTCCGCTGCAGATTGTTGAATTCTATCTGATCCTGGCGGCG---------ATT---GCTGTGGTTGGTGCG---TCGCTG------------------------------------TTCTGGCGT---CTGCTGATCGCGTCTATCGTGATGCTGGTCGCCGGTTACCTGGGCGAA---------GTA------------------AAC------ACC---------------------------------GAC------------------------------------------------------------------AGCGGC---------GCGCTGCTGTGGGGTGGC---TTCATCGTCGGTACCGCGGCATGGCTGTACATCATCTACGAAATC---------------TTC------GCG---GGTGAGGCATCCAAGATCAACGCCGAG------CAA---GGCACCGCTTCGTCC---AAG---ATG---GCC---TTC---AAC---GCCATG---CGTTGGATTGTAACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVGA-SL------------FWR-LLIASIVMLVAGYLGE---V------N--T-----------D----------------------SG---ALLWGG-FIVGTAAWLYIIYEI-----F--A-GEASKINAE--Q-GTASS-K-M-A-F-N-AM-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ929532 [unk-Proteo2-a] PRGD_OTU146_f066b84298cdffa9faadb15246757bfb gb|KJ929532| PRGD_OTU146_f066b84298cdffa9faadb15246757bfb, putative proteorhodopsin gene, partial cds. PRGD_OTU146_f066b84298cdffa9faadb15246757bfb, putative proteorhodopsin gene, partial cds. KJ929532 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTACTGACAGTTCCGTTGCAGATCGTTGAATTCTACCTGATCCTCGCTGCCATCGCCGTAGTAGGGGCTTCCTTGTTCTGGCGCTTGCTGATTGCTTCTGTAGTCATGCTCGTGGCCGGCTTTATCGGGGAAACCAATATCGCGAACGGTGGTCTGCTGTGGGGTGGTTTCGTTGTCGGTACGGCAGCGTGGGTGTACATCATCTACGAAATCTTTGCCGGTGAAGCATCGAAGATCAACGCGTCCCAGGGCACGAAAGCGTCGAAGACGGCGTTTAACGCCTTGCGCTGGATTGTAACCGTC LLTVPLQIVEFYLILAAIAVVGASLFWRLLIASVVMLVAGFIGETNIANGGLLWGGFVVGTAAWVYIIYEIFAGEASKINASQGTKASKTAFNALRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTGACAGTTCCGTTGCAGATCGTTGAATTCTACCTGATCCTCGCTGCC---------ATC---GCCGTAGTAGGGGCT---TCCTTG------------------------------------TTCTGGCGC---TTGCTGATTGCTTCTGTAGTCATGCTCGTGGCCGGCTTTATCGGGGAA---------ACC------------------AAT------ATC---------------------------------GCG------------------------------------------------------------------AACGGT---------GGTCTGCTGTGGGGTGGT---TTCGTTGTCGGTACGGCAGCGTGGGTGTACATCATCTACGAAATC---------------TTT------GCC---GGTGAAGCATCGAAGATCAACGCGTCC------CAG---GGCACGAAAGCGTCG---AAG---ACG---GCG---TTT---AAC---GCCTTG---CGCTGGATTGTAACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AVVGA-SL------------FWR-LLIASVVMLVAGFIGE---T------N--I-----------A----------------------NG---GLLWGG-FVVGTAAWVYIIYEI-----F--A-GEASKINAS--Q-GTKAS-K-T-A-F-N-AL-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ929881 [unk-Proteo2-a] PRGD_OTU332_otuREP_777f9466021224ff73245a159dd93432 gb|KJ929881| PRGD_OTU332_otuREP_777f9466021224ff73245a159dd93432, putative proteorhodopsin gene, partial cds. PRGD_OTU332_otuREP_777f9466021224ff73245a159dd93432, putative proteorhodopsin gene, partial cds. KJ929881 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGTTGACAGTGCCGTTGCAGATTACCGAGTTCTACCTAATACTCGCAGCCATTGCAGTGGTCTCAGCTTCCCTGTTTTGGCGTCTACTCATCGCCTCCGTCGTCATGCTTGTTGCCGGCTATATCGGCGAGCTGAACCCTTCCAACCCTGCTCTGCTTTGGGGTCTGTTCGTGCTCGGCACAGCGGCCTGGGTCTACATCATCTATGAAATTTTCGCCGGTGAGGCGAGCCAAATCAATGCCAACTCCGGGACCCGTGCATCCAAGCGCGCTTTCAACGCCTTGCGCTGGATCGTTACTGTC LLTVPLQITEFYLILAAIAVVSASLFWRLLIASVVMLVAGYIGELNPSNPALLWGLFVLGTAAWVYIIYEIFAGEASQINANSGTRASKRAFNALRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTGACAGTGCCGTTGCAGATTACCGAGTTCTACCTAATACTCGCAGCC---------ATT---GCAGTGGTCTCAGCT---TCCCTG------------------------------------TTTTGGCGT---CTACTCATCGCCTCCGTCGTCATGCTTGTTGCCGGCTATATCGGCGAG---------CTG------------------AAC------CCT---------------------------------TCC------------------------------------------------------------------AACCCT---------GCTCTGCTTTGGGGTCTG---TTCGTGCTCGGCACAGCGGCCTGGGTCTACATCATCTATGAAATT---------------TTC------GCC---GGTGAGGCGAGCCAAATCAATGCCAAC------TCC---GGGACCCGTGCATCC---AAG---CGC---GCT---TTC---AAC---GCCTTG---CGCTGGATCGTTACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQITEFYLILAA---I-AVVSA-SL------------FWR-LLIASVVMLVAGYIGE---L------N--P-----------S----------------------NP---ALLWGL-FVLGTAAWVYIIYEI-----F--A-GEASQINAN--S-GTRAS-K-R-A-F-N-AL-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ929890 [unk-Proteo2-a] PRGD_OTU341_otuREP_5db712b45c412a9ec3e9eb21b70a5a8b gb|KJ929890| PRGD_OTU341_otuREP_5db712b45c412a9ec3e9eb21b70a5a8b, putative proteorhodopsin gene, partial cds. PRGD_OTU341_otuREP_5db712b45c412a9ec3e9eb21b70a5a8b, putative proteorhodopsin gene, partial cds. KJ929890 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTACTCACAGTGCCACTGCAAATTATTGAGTTCTATCTCATACTTGCAGCGATTACACTTGTTGCAGCCTCGGTGTTCTGGCGTTTGCTTATTGCGTCCTTAGTGATGCTGATAGCTGGGTATCTTGGCGAAATAGGTGCCGTTAGCGTCTGGGGTGGCTTCGCTGTGGGCATGGCTGGCTGGCTCTACATCATCTACGAAGTGTTCGCGGGTGAGGCTAGCCAAATAAATGCCAGTAAGGGAACGAAAGCAAGCCAGCAAGCATTTGCTGCGCTCCGCATAATTGTTACCGTT LLTVPLQIIEFYLILAAITLVAASVFWRLLIASLVMLIAGYLGEIGAVSVWGGFAVGMAGWLYIIYEVFAGEASQINASKGTKASQQAFAALRIIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTCACAGTGCCACTGCAAATTATTGAGTTCTATCTCATACTTGCAGCG---------ATT---ACACTTGTTGCAGCC---TCGGTG------------------------------------TTCTGGCGT---TTGCTTATTGCGTCCTTAGTGATGCTGATAGCTGGGTATCTTGGCGAA---------ATA------------------GGT------GCC---------------------------------GTT------------------------------------------------------------------AGCGTC------------------TGGGGTGGC---TTCGCTGTGGGCATGGCTGGCTGGCTCTACATCATCTACGAAGTG---------------TTC------GCG---GGTGAGGCTAGCCAAATAAATGCCAGT------AAG---GGAACGAAAGCAAGC---CAG---CAA---GCA---TTT---GCT---GCGCTC---CGCATAATTGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-TLVAA-SV------------FWR-LLIASLVMLIAGYLGE---I------G--A-----------V----------------------SV------WGG-FAVGMAGWLYIIYEV-----F--A-GEASQINAS--K-GTKAS-Q-Q-A-F-A-AL-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ929638 [unk-Proteo2-a] PRGD_OTU178_otuREP_ad006e1e7300527e6159ef768a4833d9 gb|KJ929638| PRGD_OTU178_otuREP_ad006e1e7300527e6159ef768a4833d9, putative proteorhodopsin gene, partial cds. PRGD_OTU178_otuREP_ad006e1e7300527e6159ef768a4833d9, putative proteorhodopsin gene, partial cds. KJ929638 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGCTTACTGTGCCGCTCCAGATCATCGAGTTCTATCTCATTCTCGCTGCGGTAGCAGTGATTGGCGCTAGCCTGTTTTGGCGGCTGCTAGTTGCCTCCGTAGTTATGTTGGTAGCGGGCTATCTCGGGGAAGTGAATGATTCTTCTGCCACTGTTTTGTGGGGAGGGTTCGTGATCGGCACGGTGGCTTGGCTTTATATCATCTACGAGATATTTATAGGTGAGGCAAGTAAGATAAACATCAGTGAAGGTACAGACGCCTCTAAAAAGGCATTCAATGGTCTCAGGATTATCGTCACTTTT LLTVPLQIIEFYLILAAVAVIGASLFWRLLVASVVMLVAGYLGEVNDSSATVLWGGFVIGTVAWLYIIYEIFIGEASKINISEGTDASKKAFNGLRIIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTTACTGTGCCGCTCCAGATCATCGAGTTCTATCTCATTCTCGCTGCG---------GTA---GCAGTGATTGGCGCT---AGCCTG------------------------------------TTTTGGCGG---CTGCTAGTTGCCTCCGTAGTTATGTTGGTAGCGGGCTATCTCGGGGAA---------GTG------------------AAT------GAT---------------------------------TCT------------------------------------------------------------------TCTGCC---------ACTGTTTTGTGGGGAGGG---TTCGTGATCGGCACGGTGGCTTGGCTTTATATCATCTACGAGATA---------------TTT------ATA---GGTGAGGCAAGTAAGATAAACATCAGT------GAA---GGTACAGACGCCTCT---AAA---AAG---GCA---TTC---AAT---GGTCTC---AGGATTATCGTCACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---V-AVIGA-SL------------FWR-LLVASVVMLVAGYLGE---V------N--D-----------S----------------------SA---TVLWGG-FVIGTVAWLYIIYEI-----F--I-GEASKINIS--E-GTDAS-K-K-A-F-N-GL-RIIVTF-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ929640 [unk-Proteo2-a] PRGD_OTU178_ef5001a70594c6a3f4f3018c1f9db3f9 gb|KJ929640| PRGD_OTU178_ef5001a70594c6a3f4f3018c1f9db3f9, putative proteorhodopsin gene, partial cds. PRGD_OTU178_ef5001a70594c6a3f4f3018c1f9db3f9, putative proteorhodopsin gene, partial cds. KJ929640 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637) TTGCTTACTGTGCCGCTCCAGATCATCGAGTTCTATCTCATTCTCGCTGCGGTAGCAGTGATTGGCGCCAGCCTGTTCTGGCGGCTGCTAGTCGCCTCCGTAATTATGTTGGTAGCGGGCTATCTCGGAGAAGTGAATGATTCTTCTGCCACTTTTTTGTGGGGAGGGTTCGTGATCGGCACGGTGGCTTGGCTTTATATCATCTACGAGATATTTATAGGTGAGGCAAGCAAGATAAACATCAGTGAAGGTACAGACGCCTCTAAAAAGGCATTCAATGGTCTCAGGATTATCGTCACTTTT LLTVPLQIIEFYLILAAVAVIGASLFWRLLVASVIMLVAGYLGEVNDSSATFLWGGFVIGTVAWLYIIYEIFIGEASKINISEGTDASKKAFNGLRIIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTTACTGTGCCGCTCCAGATCATCGAGTTCTATCTCATTCTCGCTGCG---------GTA---GCAGTGATTGGCGCC---AGCCTG------------------------------------TTCTGGCGG---CTGCTAGTCGCCTCCGTAATTATGTTGGTAGCGGGCTATCTCGGAGAA---------GTG------------------AAT------GAT---------------------------------TCT------------------------------------------------------------------TCTGCC---------ACTTTTTTGTGGGGAGGG---TTCGTGATCGGCACGGTGGCTTGGCTTTATATCATCTACGAGATA---------------TTT------ATA---GGTGAGGCAAGCAAGATAAACATCAGT------GAA---GGTACAGACGCCTCT---AAA---AAG---GCA---TTC---AAT---GGTCTC---AGGATTATCGTCACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---V-AVIGA-SL------------FWR-LLVASVIMLVAGYLGE---V------N--D-----------S----------------------SA---TFLWGG-FVIGTVAWLYIIYEI-----F--I-GEASKINIS--E-GTDAS-K-K-A-F-N-GL-RIIVTF-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ929639 [unk-Proteo2-a] PRGD_OTU178_debc2e0800dbf0d1e55262764c81bd55 gb|KJ929639| PRGD_OTU178_debc2e0800dbf0d1e55262764c81bd55, putative proteorhodopsin gene, partial cds. PRGD_OTU178_debc2e0800dbf0d1e55262764c81bd55, putative proteorhodopsin gene, partial cds. KJ929639 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683) CTGCTTACTGTGCCGCTCCAGATTATCGAGTTCTATCTCATTCTCGCTGCGGTAGCAGTGATTGGCGCTAGCCTGTTCTGGCGGCTGCTAGTCGCCTCCGTAGTTATGTTGGTAGCGGGCTATCTCGGAGAGGTGAATGATTCCTCTGCCACTGTTTTATGGGGAGGGTTCGTGATCGGCACGGTGGCTTGGCTTTATATTATCTACGAGATATTTATAGGTGAGGCAAGCAAGATAAATATCAGTGAAGGTACAGACGCCTCTAAAAAGGCATTCAATGGACTCAGGATTATCGTCACTTTT LLTVPLQIIEFYLILAAVAVIGASLFWRLLVASVVMLVAGYLGEVNDSSATVLWGGFVIGTVAWLYIIYEIFIGEASKINISEGTDASKKAFNGLRIIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTTACTGTGCCGCTCCAGATTATCGAGTTCTATCTCATTCTCGCTGCG---------GTA---GCAGTGATTGGCGCT---AGCCTG------------------------------------TTCTGGCGG---CTGCTAGTCGCCTCCGTAGTTATGTTGGTAGCGGGCTATCTCGGAGAG---------GTG------------------AAT------GAT---------------------------------TCC------------------------------------------------------------------TCTGCC---------ACTGTTTTATGGGGAGGG---TTCGTGATCGGCACGGTGGCTTGGCTTTATATTATCTACGAGATA---------------TTT------ATA---GGTGAGGCAAGCAAGATAAATATCAGT------GAA---GGTACAGACGCCTCT---AAA---AAG---GCA---TTC---AAT---GGACTC---AGGATTATCGTCACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---V-AVIGA-SL------------FWR-LLVASVVMLVAGYLGE---V------N--D-----------S----------------------SA---TVLWGG-FVIGTVAWLYIIYEI-----F--I-GEASKINIS--E-GTDAS-K-K-A-F-N-GL-RIIVTF-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ929387 [unk-Proteo2-a] PRGD_OTU115_12f6e1e855e662603a46fbb16c9df0eb gb|KJ929387| PRGD_OTU115_12f6e1e855e662603a46fbb16c9df0eb, putative proteorhodopsin gene, partial cds. PRGD_OTU115_12f6e1e855e662603a46fbb16c9df0eb, putative proteorhodopsin gene, partial cds. KJ929387 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTCTTACTGTACCATTACAGATCATTGAATTTTATTTAATCTTAATAGCAATTACTAAAGTAAATGCGAGCGTCTTTTGGAGATTGCTCATCGCTTCACTAGTAATGTTATTAGCTGGTTACTTCGGCGAACTAAATTACAAAGATCCAAACTTATTATGGGGTTATTTCACAGTTGGTTTGCTTGGATGGTTTTATATCATATACGAAATTTTTGCAGGTGAAGCTGGTCAGATCAGTGCTAGCAAAGGCACCGTTGCATCCAAAAAGGCATTTAACGGTATACGAATCATCGTAACATTT ILTVPLQIIEFYLILIAITKVNASVFWRLLIASLVMLLAGYFGELNYKDPNLLWGYFTVGLLGWFYIIYEIFAGEAGQISASKGTVASKKAFNGIRIIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTACTGTACCATTACAGATCATTGAATTTTATTTAATCTTAATAGCA---------ATT---ACTAAAGTAAATGCG---AGCGTC------------------------------------TTTTGGAGA---TTGCTCATCGCTTCACTAGTAATGTTATTAGCTGGTTACTTCGGCGAA---------CTA------------------AAT------TAC---------------------------------AAA------------------------------------------------------------------GATCCA---------AACTTATTATGGGGTTAT---TTCACAGTTGGTTTGCTTGGATGGTTTTATATCATATACGAAATT---------------TTT------GCA---GGTGAAGCTGGTCAGATCAGTGCTAGC------AAA---GGCACCGTTGCATCC---AAA---AAG---GCA---TTT---AAC---GGTATA---CGAATCATCGTAACATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLQIIEFYLILIA---I-TKVNA-SV------------FWR-LLIASLVMLLAGYFGE---L------N--Y-----------K----------------------DP---NLLWGY-FTVGLLGWFYIIYEI-----F--A-GEAGQISAS--K-GTVAS-K-K-A-F-N-GI-RIIVTF-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ929386 [unk-Proteo2-a] PRGD_OTU115_otuREP_4e37ca922348f70eb441bb0503abdaaf gb|KJ929386| PRGD_OTU115_otuREP_4e37ca922348f70eb441bb0503abdaaf, putative proteorhodopsin gene, partial cds. PRGD_OTU115_otuREP_4e37ca922348f70eb441bb0503abdaaf, putative proteorhodopsin gene, partial cds. KJ929386 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419) ATTCTTACTGTACCATTACAGATCATTGAATTTTATTTAATCTTAATAGCAATTACTAAAGTAAATGCGAGCGTCTTTTGGCGATTACTCATCGCTTCATTAGTAATGTTATTAGCTGGTTACTTCGGCGAACTAAATTACAAAGATCCAAACTTATTATGGGGTTATTTCACAGTTGGTTTGCTTGGATGGTTTTATATCATATACGAAATTTTTGCAGGTGAAGCTGGTCAGATCAGTGCTAGCAAAGGTACCGTTGCATCCAAAAAGGCATTTAACGGTATACGAATCATCGTAACATTT ILTVPLQIIEFYLILIAITKVNASVFWRLLIASLVMLLAGYFGELNYKDPNLLWGYFTVGLLGWFYIIYEIFAGEAGQISASKGTVASKKAFNGIRIIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTACTGTACCATTACAGATCATTGAATTTTATTTAATCTTAATAGCA---------ATT---ACTAAAGTAAATGCG---AGCGTC------------------------------------TTTTGGCGA---TTACTCATCGCTTCATTAGTAATGTTATTAGCTGGTTACTTCGGCGAA---------CTA------------------AAT------TAC---------------------------------AAA------------------------------------------------------------------GATCCA---------AACTTATTATGGGGTTAT---TTCACAGTTGGTTTGCTTGGATGGTTTTATATCATATACGAAATT---------------TTT------GCA---GGTGAAGCTGGTCAGATCAGTGCTAGC------AAA---GGTACCGTTGCATCC---AAA---AAG---GCA---TTT---AAC---GGTATA---CGAATCATCGTAACATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLQIIEFYLILIA---I-TKVNA-SV------------FWR-LLIASLVMLLAGYFGE---L------N--Y-----------K----------------------DP---NLLWGY-FTVGLLGWFYIIYEI-----F--A-GEAGQISAS--K-GTVAS-K-K-A-F-N-GI-RIIVTF-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ929389 [unk-Proteo2-a] PRGD_OTU115_8b64e90f225b0b69a27dd9a9328f0220 gb|KJ929389| PRGD_OTU115_8b64e90f225b0b69a27dd9a9328f0220, putative proteorhodopsin gene, partial cds. PRGD_OTU115_8b64e90f225b0b69a27dd9a9328f0220, putative proteorhodopsin gene, partial cds. KJ929389 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTCTTACTGTACCATTACAGATCATTGAATTTTATTTAATCTTAATAGCAATTACTAAAGTAAATGCGAGCGTTTTTTGGAGATTGCTCATCGCTTCATTAATAATGTTATTAGCTGGTTACTTCGGCGAACTAAATTACAAAGATCCAAACTTATTATGGGGTTATTTCACAGTTGGTTTGCTTGGATGGCTTTATATCATATACGAAATCTTTGCAGGGGAAGCTGGTCAAATCAGTGCTAGCAAAGGTACTGTTGCATCCAAAAAGGCATTTAACGGTATACGAATCATCGTAACATTT ILTVPLQIIEFYLILIAITKVNASVFWRLLIASLIMLLAGYFGELNYKDPNLLWGYFTVGLLGWLYIIYEIFAGEAGQISASKGTVASKKAFNGIRIIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTACTGTACCATTACAGATCATTGAATTTTATTTAATCTTAATAGCA---------ATT---ACTAAAGTAAATGCG---AGCGTT------------------------------------TTTTGGAGA---TTGCTCATCGCTTCATTAATAATGTTATTAGCTGGTTACTTCGGCGAA---------CTA------------------AAT------TAC---------------------------------AAA------------------------------------------------------------------GATCCA---------AACTTATTATGGGGTTAT---TTCACAGTTGGTTTGCTTGGATGGCTTTATATCATATACGAAATC---------------TTT------GCA---GGGGAAGCTGGTCAAATCAGTGCTAGC------AAA---GGTACTGTTGCATCC---AAA---AAG---GCA---TTT---AAC---GGTATA---CGAATCATCGTAACATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLQIIEFYLILIA---I-TKVNA-SV------------FWR-LLIASLIMLLAGYFGE---L------N--Y-----------K----------------------DP---NLLWGY-FTVGLLGWLYIIYEI-----F--A-GEAGQISAS--K-GTVAS-K-K-A-F-N-GI-RIIVTF-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ929391 [unk-Proteo2-a] PRGD_OTU115_c8ab3784e68a43058a1a5215d7316eb8 gb|KJ929391| PRGD_OTU115_c8ab3784e68a43058a1a5215d7316eb8, putative proteorhodopsin gene, partial cds. PRGD_OTU115_c8ab3784e68a43058a1a5215d7316eb8, putative proteorhodopsin gene, partial cds. KJ929391 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) ATCCTTACTGTACCATTACAGATCATTGAATTTTATTTAATCTTAATAGCAATTACTAAAGTAAATGCGAGCGTCTTTTGGAGATTGCTCATCGCTTCATTAGTAATGTTATTAGCTGGTTACTTCGGCGAACTAAATTACAAAGATCCAAACTTATTATGGGGTTATTTCACAGTTGGTTTGCTTGGATGGCTTTATATCATATACGAAATCTTTGCAGGGGAAGCTGGTCAAATCAGTGCTAGCAAAGGTACTGTTGCATCCAAAAAGGCATTTAACGGTATACGAATCATCGTAACATTT ILTVPLQIIEFYLILIAITKVNASVFWRLLIASLVMLLAGYFGELNYKDPNLLWGYFTVGLLGWLYIIYEIFAGEAGQISASKGTVASKKAFNGIRIIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCTTACTGTACCATTACAGATCATTGAATTTTATTTAATCTTAATAGCA---------ATT---ACTAAAGTAAATGCG---AGCGTC------------------------------------TTTTGGAGA---TTGCTCATCGCTTCATTAGTAATGTTATTAGCTGGTTACTTCGGCGAA---------CTA------------------AAT------TAC---------------------------------AAA------------------------------------------------------------------GATCCA---------AACTTATTATGGGGTTAT---TTCACAGTTGGTTTGCTTGGATGGCTTTATATCATATACGAAATC---------------TTT------GCA---GGGGAAGCTGGTCAAATCAGTGCTAGC------AAA---GGTACTGTTGCATCC---AAA---AAG---GCA---TTT---AAC---GGTATA---CGAATCATCGTAACATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLQIIEFYLILIA---I-TKVNA-SV------------FWR-LLIASLVMLLAGYFGE---L------N--Y-----------K----------------------DP---NLLWGY-FTVGLLGWLYIIYEI-----F--A-GEAGQISAS--K-GTVAS-K-K-A-F-N-GI-RIIVTF-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ929388 [unk-Proteo2-a] PRGD_OTU115_86e5ba164f912d757a352cf56733322c gb|KJ929388| PRGD_OTU115_86e5ba164f912d757a352cf56733322c, putative proteorhodopsin gene, partial cds. PRGD_OTU115_86e5ba164f912d757a352cf56733322c, putative proteorhodopsin gene, partial cds. KJ929388 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175; 33.935, 18.508) ATTCTTACTGTACCATTACAGATCATTGAATTTTATTTAATCTTAATAGCAATTACTAAAGTAAATGCGAGCGTCTTTTGGCGATTGCTCATCGCTTCATTAGTAATGTTATTAGCTGGTTACTTCGGCGAACTAAATTACAAAGATCCAAACTTATTATGGGGTTATTTCACAGTTGGTTTGCTTGGATGGTTTTATATCATATACGAAATCTTTGCAGGGGAAGCTGGTCAAATCAGTGCTAGCAAAGGTACTGTTGCATCCAAAAAGGCATTTAACGGTATACGAATCATCGTAACATTT ILTVPLQIIEFYLILIAITKVNASVFWRLLIASLVMLLAGYFGELNYKDPNLLWGYFTVGLLGWFYIIYEIFAGEAGQISASKGTVASKKAFNGIRIIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTACTGTACCATTACAGATCATTGAATTTTATTTAATCTTAATAGCA---------ATT---ACTAAAGTAAATGCG---AGCGTC------------------------------------TTTTGGCGA---TTGCTCATCGCTTCATTAGTAATGTTATTAGCTGGTTACTTCGGCGAA---------CTA------------------AAT------TAC---------------------------------AAA------------------------------------------------------------------GATCCA---------AACTTATTATGGGGTTAT---TTCACAGTTGGTTTGCTTGGATGGTTTTATATCATATACGAAATC---------------TTT------GCA---GGGGAAGCTGGTCAAATCAGTGCTAGC------AAA---GGTACTGTTGCATCC---AAA---AAG---GCA---TTT---AAC---GGTATA---CGAATCATCGTAACATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLQIIEFYLILIA---I-TKVNA-SV------------FWR-LLIASLVMLLAGYFGE---L------N--Y-----------K----------------------DP---NLLWGY-FTVGLLGWFYIIYEI-----F--A-GEAGQISAS--K-GTVAS-K-K-A-F-N-GI-RIIVTF-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ929390 [unk-Proteo2-a] PRGD_OTU115_97e8f59617cffea35a92d86e1351b3f7 gb|KJ929390| PRGD_OTU115_97e8f59617cffea35a92d86e1351b3f7, putative proteorhodopsin gene, partial cds. PRGD_OTU115_97e8f59617cffea35a92d86e1351b3f7, putative proteorhodopsin gene, partial cds. KJ929390 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) ATCCTCACTGTACCATTACAGATTATTGAATTTTATTTAATCTTGATAGCAATTACTAAAGTAAATGCGAGCGTCTTTTGGCGATTACTCATCGCTTCATTAGTAATGTTATTAGCTGGTTACTTCGGCGAACTAAATTACAAAGATCCAAACTTACTATGGGGTTATTTCACAGTTGGTTTGCTTGGATGGTTTTATATCATATACGAAATCTTTGCAGGGGAAGCTGGTCAAATCAGTGCTAGCAAAGGTACCGTCGCATCTAAAAAGGCATTTAACGGTATACGAATCATCGTAACATTT ILTVPLQIIEFYLILIAITKVNASVFWRLLIASLVMLLAGYFGELNYKDPNLLWGYFTVGLLGWFYIIYEIFAGEAGQISASKGTVASKKAFNGIRIIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCTCACTGTACCATTACAGATTATTGAATTTTATTTAATCTTGATAGCA---------ATT---ACTAAAGTAAATGCG---AGCGTC------------------------------------TTTTGGCGA---TTACTCATCGCTTCATTAGTAATGTTATTAGCTGGTTACTTCGGCGAA---------CTA------------------AAT------TAC---------------------------------AAA------------------------------------------------------------------GATCCA---------AACTTACTATGGGGTTAT---TTCACAGTTGGTTTGCTTGGATGGTTTTATATCATATACGAAATC---------------TTT------GCA---GGGGAAGCTGGTCAAATCAGTGCTAGC------AAA---GGTACCGTCGCATCT---AAA---AAG---GCA---TTT---AAC---GGTATA---CGAATCATCGTAACATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLQIIEFYLILIA---I-TKVNA-SV------------FWR-LLIASLVMLLAGYFGE---L------N--Y-----------K----------------------DP---NLLWGY-FTVGLLGWFYIIYEI-----F--A-GEAGQISAS--K-GTVAS-K-K-A-F-N-GI-RIIVTF-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ929791 [unk-Proteo2-a] PRGD_OTU247_211e4837ae24d51c854a17bcd8aea25a gb|KJ929791| PRGD_OTU247_211e4837ae24d51c854a17bcd8aea25a, putative proteorhodopsin gene, partial cds. PRGD_OTU247_211e4837ae24d51c854a17bcd8aea25a, putative proteorhodopsin gene, partial cds. KJ929791 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175) CTCTTAACAGTGCCACTTCAAATGGTTGAGTTCTACCTGATCCTCGCAGCTGTAACAGCTGTATCAGTAGGCGTTTTTTGGAGACTGTTAATCGCTTCAACCATAATGTTGGTTGCAGGATTTATCGGTGAACAAAATGTGGCTGGTTCGGCAGCTAACATCGGTTGGTGGGTAGTTGGAATGGTTGCTTGGCTGTATATGTTGAAAGAACTATTCACCGGTGAAGCAGCTAGAATGAGTGCAGAGAGCTCTAATGCCAGCTTGCAAACCGCTTTTAACGCTATGCGATTAATCGTAACTGTG LLTVPLQMVEFYLILAAVTAVSVGVFWRLLIASTIMLVAGFIGEQNVAGSAANIGWWVVGMVAWLYMLKELFTGEAARMSAESSNASLQTAFNAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACAGTGCCACTTCAAATGGTTGAGTTCTACCTGATCCTCGCAGCT---------GTA---ACAGCTGTATCAGTA---GGCGTT------------------------------------TTTTGGAGA---CTGTTAATCGCTTCAACCATAATGTTGGTTGCAGGATTTATCGGTGAA---------CAA------------------AAT------GTGGCT------------------------GGTTCGGCA------------------------------------------------------------------GCTAAC------------------ATCGGTTGG---TGGGTAGTTGGAATGGTTGCTTGGCTGTATATGTTGAAAGAACTA---------------TTC------ACC---GGTGAAGCAGCTAGAATGAGTGCAGAG------AGC---TCTAATGCCAGCTTG---CAA---ACC---GCT---TTT---AAC---GCTATG---CGATTAATCGTAACTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMVEFYLILAA---V-TAVSV-GV------------FWR-LLIASTIMLVAGFIGE---Q------N--VA--------GSA----------------------AN------IGW-WVVGMVAWLYMLKEL-----F--T-GEAARMSAE--S-SNASL-Q-T-A-F-N-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ929790 [unk-Proteo2-a] PRGD_OTU247_otuREP_f1aa47d2b03ecedb7a89b1c65a6a30dd gb|KJ929790| PRGD_OTU247_otuREP_f1aa47d2b03ecedb7a89b1c65a6a30dd, putative proteorhodopsin gene, partial cds. PRGD_OTU247_otuREP_f1aa47d2b03ecedb7a89b1c65a6a30dd, putative proteorhodopsin gene, partial cds. KJ929790 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTATTAACAGTGCCACTTCAAATGGTTGAGTTCTACCTGATCCTTGCAGCTGTAACAGCTGTTTCAGTAGGCGTTTTTTGGAGACTGTTAATTGCTTCAACCATTATGTTGGTTGCAGGGTTTATCGGTGAACAAAATGTGGCTGGTTCGGCAGCTAACATCGGTTGGTGGGTAGTTGGAATGGTTGCTTGGCTATATATGCTGAAAGAACTATTTACCGGTGAAGCAGCTAGAATGAGTGCAGAGAGCTCTAATGCTAGCCTGCAAACCGCTTTTAACGCCATGCGATTAATTGTAACTGTG LLTVPLQMVEFYLILAAVTAVSVGVFWRLLIASTIMLVAGFIGEQNVAGSAANIGWWVVGMVAWLYMLKELFTGEAARMSAESSNASLQTAFNAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACAGTGCCACTTCAAATGGTTGAGTTCTACCTGATCCTTGCAGCT---------GTA---ACAGCTGTTTCAGTA---GGCGTT------------------------------------TTTTGGAGA---CTGTTAATTGCTTCAACCATTATGTTGGTTGCAGGGTTTATCGGTGAA---------CAA------------------AAT------GTGGCT------------------------GGTTCGGCA------------------------------------------------------------------GCTAAC------------------ATCGGTTGG---TGGGTAGTTGGAATGGTTGCTTGGCTATATATGCTGAAAGAACTA---------------TTT------ACC---GGTGAAGCAGCTAGAATGAGTGCAGAG------AGC---TCTAATGCTAGCCTG---CAA---ACC---GCT---TTT---AAC---GCCATG---CGATTAATTGTAACTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMVEFYLILAA---V-TAVSV-GV------------FWR-LLIASTIMLVAGFIGE---Q------N--VA--------GSA----------------------AN------IGW-WVVGMVAWLYMLKEL-----F--T-GEAARMSAE--S-SNASL-Q-T-A-F-N-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ929835 [unk-Proteo2-a] PRGD_OTU286_otuREP_d32c450dd03113090ae20ad5d587f171 gb|KJ929835| PRGD_OTU286_otuREP_d32c450dd03113090ae20ad5d587f171, putative proteorhodopsin gene, partial cds. PRGD_OTU286_otuREP_d32c450dd03113090ae20ad5d587f171, putative proteorhodopsin gene, partial cds. KJ929835 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATATTAACTGTTCCTCTTCAGATCATTGAGTTTTATCTTATCTTAAGCGCCATAACTCGAGTTAGAGCATCCTTATTTTGGCGACTTCTCGTGGCATCACTCATCATGTTAGTTTCAGGGTATATCGGCGAAATTAATGCTAGCCAACCATCCGTCGTCTGGTATGGTTATACTGTTGGCATGATAGCCTGGTTATATATCATCTATGAGATATTCTTTGGCCAAGCTGCCAATCTAAATCAGCAATACGGTACACATGCTTCGCGCGCAGCGTTCAATGCTATGCGATGGATTGTTACCATA ILTVPLQIIEFYLILSAITRVRASLFWRLLVASLIMLVSGYIGEINASQPSVVWYGYTVGMIAWLYIIYEIFFGQAANLNQQYGTHASRAAFNAMRWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTAACTGTTCCTCTTCAGATCATTGAGTTTTATCTTATCTTAAGCGCC---------ATA---ACTCGAGTTAGAGCA---TCCTTA------------------------------------TTTTGGCGA---CTTCTCGTGGCATCACTCATCATGTTAGTTTCAGGGTATATCGGCGAA---------ATT------------------AAT------GCT---------------------------------AGC------------------------------------------------------------------CAACCA---------TCCGTCGTCTGGTATGGT---TATACTGTTGGCATGATAGCCTGGTTATATATCATCTATGAGATA---------------TTC------TTT---GGCCAAGCTGCCAATCTAAATCAGCAA------TAC---GGTACACATGCTTCG---CGC---GCA---GCG---TTC---AAT---GCTATG---CGATGGATTGTTACCATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLQIIEFYLILSA---I-TRVRA-SL------------FWR-LLVASLIMLVSGYIGE---I------N--A-----------S----------------------QP---SVVWYG-YTVGMIAWLYIIYEI-----F--F-GQAANLNQQ--Y-GTHAS-R-A-A-F-N-AM-RWIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ929438 [unk-Proteo2-a] PRGD_OTU125_101bcd5fa5b08fe7ada89f3f0b765eb1 gb|KJ929438| PRGD_OTU125_101bcd5fa5b08fe7ada89f3f0b765eb1, putative proteorhodopsin gene, partial cds. PRGD_OTU125_101bcd5fa5b08fe7ada89f3f0b765eb1, putative proteorhodopsin gene, partial cds. KJ929438 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTACTTACAGTGCCTCTTCAAATTATAGAGTTTTACTTGATTTTGGCTGCGATAGCTGTTGTTGCAGCGTCACTTTTTTGGCGTCTACTAATAGCATCAATAGTAATGCTTGTGGCTGGGTACTTGGGCGAAGTTAACGCAGCAGATACCAACACGTTATGGATTTGCTTCATTATTGGAATGCTCGGATGGCTTTATATTATCCGAGAAATTTTCACTGGAGAGGCAAGTGAAATAAATGCAAGTTCCGGAAGTGTTGCGTCTCAGACGGCATTTGGAGCTCTTCGAATGATTGTTACAGTT LLTVPLQIIEFYLILAAIAVVAASLFWRLLIASIVMLVAGYLGEVNAADTNTLWICFIIGMLGWLYIIREIFTGEASEINASSGSVASQTAFGALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTTACAGTGCCTCTTCAAATTATAGAGTTTTACTTGATTTTGGCTGCG---------ATA---GCTGTTGTTGCAGCG---TCACTT------------------------------------TTTTGGCGT---CTACTAATAGCATCAATAGTAATGCTTGTGGCTGGGTACTTGGGCGAA---------GTT------------------AAC------GCA---------------------------------GCA------------------------------------------------------------------GATACC---------AACACGTTATGGATTTGC---TTCATTATTGGAATGCTCGGATGGCTTTATATTATCCGAGAAATT---------------TTC------ACT---GGAGAGGCAAGTGAAATAAATGCAAGT------TCC---GGAAGTGTTGCGTCT---CAG---ACG---GCA---TTT---GGA---GCTCTT---CGAATGATTGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AVVAA-SL------------FWR-LLIASIVMLVAGYLGE---V------N--A-----------A----------------------DT---NTLWIC-FIIGMLGWLYIIREI-----F--T-GEASEINAS--S-GSVAS-Q-T-A-F-G-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ929437 [unk-Proteo2-a] PRGD_OTU125_otuREP_718118312b88a657c97e57a8204ff31d gb|KJ929437| PRGD_OTU125_otuREP_718118312b88a657c97e57a8204ff31d, putative proteorhodopsin gene, partial cds. PRGD_OTU125_otuREP_718118312b88a657c97e57a8204ff31d, putative proteorhodopsin gene, partial cds. KJ929437 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTGCTTACAGTTCCCCTTCAAATTATCGAATTTTATCTCATCCTAGCCGCTATTGCCGCTGTAGCCGCGTCTCTTTTTTGGCGCCTCTTAATCGCATCAATAGTCATGCTCGTTGCTGGGTATCTCGGAGAGGTTAATTCAGGTGACACAAACATGTTATGGATATGTTTTGTAATCGGGCTTCTTGCTTGGTTTTACATTATCCGCGAGGTTTTTGTGGGTGAAGCCAGTGAGATAAATGCGAGTTCTGGTAGCGCTGCATCTCAGGCTGCATTTAGTGCACTTCGAATGATTGTTACAATT LLTVPLQIIEFYLILAAIAAVAASLFWRLLIASIVMLVAGYLGEVNSGDTNMLWICFVIGLLAWFYIIREVFVGEASEINASSGSAASQAAFSALRMIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTTACAGTTCCCCTTCAAATTATCGAATTTTATCTCATCCTAGCCGCT---------ATT---GCCGCTGTAGCCGCG---TCTCTT------------------------------------TTTTGGCGC---CTCTTAATCGCATCAATAGTCATGCTCGTTGCTGGGTATCTCGGAGAG---------GTT------------------AAT------TCA---------------------------------GGT------------------------------------------------------------------GACACA---------AACATGTTATGGATATGT---TTTGTAATCGGGCTTCTTGCTTGGTTTTACATTATCCGCGAGGTT---------------TTT------GTG---GGTGAAGCCAGTGAGATAAATGCGAGT------TCT---GGTAGCGCTGCATCT---CAG---GCT---GCA---TTT---AGT---GCACTT---CGAATGATTGTTACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AAVAA-SL------------FWR-LLIASIVMLVAGYLGE---V------N--S-----------G----------------------DT---NMLWIC-FVIGLLAWFYIIREV-----F--V-GEASEINAS--S-GSAAS-Q-A-A-F-S-AL-RMIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ929439 [unk-Proteo2-a] PRGD_OTU125_84ac5cd55f27d88c9c8a2bc7cae201ef gb|KJ929439| PRGD_OTU125_84ac5cd55f27d88c9c8a2bc7cae201ef, putative proteorhodopsin gene, partial cds. PRGD_OTU125_84ac5cd55f27d88c9c8a2bc7cae201ef, putative proteorhodopsin gene, partial cds. KJ929439 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTCTAACAGTGCCACTTCAAATTATTGAGTTTTATTTGATACTAGCTGCAATTGCTACTGTTGCAGCATCACTTTTTTGGCGCCTTTTAATTGCGTCAATAGTCATGCTGGTCGCAGGGTACCTTGGTGAAGTAAATGCATCAGATACTAATTTGCTATGGGCTTGCTTCATAGTTGGGCTGCTTGCATGGTTCTACATTATTCGCGAAATTTTCACTGGTGAGGCAAGTGAAATTAATGCGAGTTCTGGAACTGCAGCTTCTCAAGCGGCGTTTGGCGCTCTTCGAATGATTGTAACAGTT LLTVPLQIIEFYLILAAIATVAASLFWRLLIASIVMLVAGYLGEVNASDTNLLWACFIVGLLAWFYIIREIFTGEASEINASSGTAASQAAFGALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTAACAGTGCCACTTCAAATTATTGAGTTTTATTTGATACTAGCTGCA---------ATT---GCTACTGTTGCAGCA---TCACTT------------------------------------TTTTGGCGC---CTTTTAATTGCGTCAATAGTCATGCTGGTCGCAGGGTACCTTGGTGAA---------GTA------------------AAT------GCA---------------------------------TCA------------------------------------------------------------------GATACT---------AATTTGCTATGGGCTTGC---TTCATAGTTGGGCTGCTTGCATGGTTCTACATTATTCGCGAAATT---------------TTC------ACT---GGTGAGGCAAGTGAAATTAATGCGAGT------TCT---GGAACTGCAGCTTCT---CAA---GCG---GCG---TTT---GGC---GCTCTT---CGAATGATTGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-ATVAA-SL------------FWR-LLIASIVMLVAGYLGE---V------N--A-----------S----------------------DT---NLLWAC-FIVGLLAWFYIIREI-----F--T-GEASEINAS--S-GTAAS-Q-A-A-F-G-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ929441 [unk-Proteo2-a] PRGD_OTU125_b679b2e9796faa8653d040121b3cfad2 gb|KJ929441| PRGD_OTU125_b679b2e9796faa8653d040121b3cfad2, putative proteorhodopsin gene, partial cds. PRGD_OTU125_b679b2e9796faa8653d040121b3cfad2, putative proteorhodopsin gene, partial cds. KJ929441 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTACTTACAGTGCCACTTCAAATTATTGAATTTTACTTGATTTTAGCTGCAATTGCTGCAGTGGCTGCTTCTCTATTTTGGCGCCTATTAATTGCGTCTGTGGTTATGCTTGTCGCGGGTTACCTTGGAGAAGTGAACGCTTCTGACGCAACTATGCTTTGGGTCTGCTTTGGAATAGGTCTGCTTGCTTGGTTTTATATCATTCGGGAGATTTTTGTTGGTGAAGCTAGTGAAATAAATGCAAATTCTGGCACCGCAGCATCTCAAGCGGCTTTCAAGGCACTTCGGATGATTGTGACAGTC LLTVPLQIIEFYLILAAIAAVAASLFWRLLIASVVMLVAGYLGEVNASDATMLWVCFGIGLLAWFYIIREIFVGEASEINANSGTAASQAAFKALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTTACAGTGCCACTTCAAATTATTGAATTTTACTTGATTTTAGCTGCA---------ATT---GCTGCAGTGGCTGCT---TCTCTA------------------------------------TTTTGGCGC---CTATTAATTGCGTCTGTGGTTATGCTTGTCGCGGGTTACCTTGGAGAA---------GTG------------------AAC------GCT---------------------------------TCT------------------------------------------------------------------GACGCA---------ACTATGCTTTGGGTCTGC---TTTGGAATAGGTCTGCTTGCTTGGTTTTATATCATTCGGGAGATT---------------TTT------GTT---GGTGAAGCTAGTGAAATAAATGCAAAT------TCT---GGCACCGCAGCATCT---CAA---GCG---GCT---TTC---AAG---GCACTT---CGGATGATTGTGACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AAVAA-SL------------FWR-LLIASVVMLVAGYLGE---V------N--A-----------S----------------------DA---TMLWVC-FGIGLLAWFYIIREI-----F--V-GEASEINAN--S-GTAAS-Q-A-A-F-K-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-a]_KJ929440 [unk-Proteo2-a] PRGD_OTU125_8aa6d5417e83311406797beed9285582 gb|KJ929440| PRGD_OTU125_8aa6d5417e83311406797beed9285582, putative proteorhodopsin gene, partial cds. PRGD_OTU125_8aa6d5417e83311406797beed9285582, putative proteorhodopsin gene, partial cds. KJ929440 [[proteorhodopsin/Proteobacterial-like cluster 2/A subcluster]] proteorhodopsin Proteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683) CTGCTTACAGTGCCTCTTCAAATTATTGAATTTTACTTGATTCTGGCTGCAATAGCTGCAGTAGCGGCGTCGCTTTTTTGGCGCCTTCTAATCGCTTCAGTAGTCATGCTTATTGCGGGATACATTGGCGAAGTCAATGCTTCTGATGAAACTATGCTTTGGGTTTGCTTTGCAATAGGTCTACTTGCTTGGTTTTATATCATTCGGGAAATTTTTGTCGGAGAGGCTAGCGATATAAATTCTAGCTCTGGTAGTGCAGCTTCACAGGCGGCCTTTAGAGCATTAAGAATGATTGTAACAGTG LLTVPLQIIEFYLILAAIAAVAASLFWRLLIASVVMLIAGYIGEVNASDETMLWVCFAIGLLAWFYIIREIFVGEASDINSSSGSAASQAAFRALRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTTACAGTGCCTCTTCAAATTATTGAATTTTACTTGATTCTGGCTGCA---------ATA---GCTGCAGTAGCGGCG---TCGCTT------------------------------------TTTTGGCGC---CTTCTAATCGCTTCAGTAGTCATGCTTATTGCGGGATACATTGGCGAA---------GTC------------------AAT------GCT---------------------------------TCT------------------------------------------------------------------GATGAA---------ACTATGCTTTGGGTTTGC---TTTGCAATAGGTCTACTTGCTTGGTTTTATATCATTCGGGAAATT---------------TTT------GTC---GGAGAGGCTAGCGATATAAATTCTAGC------TCT---GGTAGTGCAGCTTCA---CAG---GCG---GCC---TTT---AGA---GCATTA---AGAATGATTGTAACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-AAVAA-SL------------FWR-LLIASVVMLIAGYIGE---V------N--A-----------S----------------------DE---TMLWVC-FAIGLLAWFYIIREI-----F--V-GEASDINSS--S-GSAAS-Q-A-A-F-R-AL-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Photobacterium]_KJ929802 [unk-Proteo2-Photobacterium] PRGD_OTU253_otuREP_7c08a3807adfe56dca9c3e88c17b233f gb|KJ929802| PRGD_OTU253_otuREP_7c08a3807adfe56dca9c3e88c17b233f, putative proteorhodopsin gene, partial cds. PRGD_OTU253_otuREP_7c08a3807adfe56dca9c3e88c17b233f, putative proteorhodopsin gene, partial cds. KJ929802 [[proteorhodopsin/Proteobacterial-like cluster 2/Photobacterium Gammaproteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Photobacterium Gammaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGCTAACGGTACCGTTGCAAATCATAGAGTTTTTCTTGATTCTTGCTGCTATTGCCGCTGTACCTACCTCTCTATTTTGGCGACTACTCGTTGCCAGTGTCATCATGCTTGTCGGCGGATATTTAGGTGAGGTTGGTACTCTTACACCTATGGTCGGTTTCGTAATCGGAATGCTAGGTTGGATCTACATTATTTATGAAGTCTTTATGGGAGAAGCAAGTTCTATAAATGCTAATAGTGGTAATGAGGCCAGCCAAACGGCGTTTAAAGCACTTAGACTGATCGTAACTGTG LLTVPLQIIEFFLILAAIAAVPTSLFWRLLVASVIMLVGGYLGEVGTLTPMVGFVIGMLGWIYIIYEVFMGEASSINANSGNEASQTAFKALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTAACGGTACCGTTGCAAATCATAGAGTTTTTCTTGATTCTTGCTGCT---------ATT---GCCGCTGTACCTACC---TCTCTA------------------------------------TTTTGGCGA---CTACTCGTTGCCAGTGTCATCATGCTTGTCGGCGGATATTTAGGTGAG---------GTT------------------GGT------ACT---------------------------------CTT------------------------------------------------------------------ACACCT------------------ATGGTCGGT---TTCGTAATCGGAATGCTAGGTTGGATCTACATTATTTATGAAGTC---------------TTT------ATG---GGAGAAGCAAGTTCTATAAATGCTAAT------AGT---GGTAATGAGGCCAGC---CAA---ACG---GCG---TTT---AAA---GCACTT---AGACTGATCGTAACTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILAA---I-AAVPT-SL------------FWR-LLVASVIMLVGGYLGE---V------G--T-----------L----------------------TP------MVG-FVIGMLGWIYIIYEV-----F--M-GEASSINAN--S-GNEAS-Q-T-A-F-K-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Photobacterium]_KJ929858 [unk-Proteo2-Photobacterium] PRGD_OTU309_otuREP_4325a6e1a64feb87098eb9b79b25008b gb|KJ929858| PRGD_OTU309_otuREP_4325a6e1a64feb87098eb9b79b25008b, putative proteorhodopsin gene, partial cds. PRGD_OTU309_otuREP_4325a6e1a64feb87098eb9b79b25008b, putative proteorhodopsin gene, partial cds. KJ929858 [[proteorhodopsin/Proteobacterial-like cluster 2/Photobacterium Gammaproteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Photobacterium Gammaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) TTTATCACCGTCCCGTTACAAATCGTAGAGTTCTACCTCATTCTTGCTGCGATCGCGGTAGTACCGAAATCGCTCTTCTGGAGACTTTTAACAGCTTCCATCGTCATGCTGGTAGGTGGTTACTTAGGCGAAGCTGGTTTCATTTCACCGATGCTCGGGTTTATCATCGGGATGCTTGGTTGGCTATATATCATTTATGAGATCTTCGCTGGCGAAGCGAGCAGAATTAACGCAGGATCGGCAAATCCGGCGTGTCAAAAAGCCTTTGGTGCTCTCAGGCTAATCGTGACTGTC FITVPLQIVEFYLILAAIAVVPKSLFWRLLTASIVMLVGGYLGEAGFISPMLGFIIGMLGWLYIIYEIFAGEASRINAGSANPACQKAFGALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATCACCGTCCCGTTACAAATCGTAGAGTTCTACCTCATTCTTGCTGCG---------ATC---GCGGTAGTACCGAAA---TCGCTC------------------------------------TTCTGGAGA---CTTTTAACAGCTTCCATCGTCATGCTGGTAGGTGGTTACTTAGGCGAA---------GCT------------------GGT------TTC---------------------------------ATT------------------------------------------------------------------TCACCG------------------ATGCTCGGG---TTTATCATCGGGATGCTTGGTTGGCTATATATCATTTATGAGATC---------------TTC------GCT---GGCGAAGCGAGCAGAATTAACGCAGGA------TCG---GCAAATCCGGCGTGT---CAA---AAA---GCC---TTT---GGT---GCTCTC---AGGCTAATCGTGACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIVEFYLILAA---I-AVVPK-SL------------FWR-LLTASIVMLVGGYLGE---A------G--F-----------I----------------------SP------MLG-FIIGMLGWLYIIYEI-----F--A-GEASRINAG--S-ANPAC-Q-K-A-F-G-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Photobacterium]_KJ929718 [unk-Proteo2-Photobacterium] PRGD_OTU211_otuREP_0f7d84e0506ead0a41999a739bf3d61d gb|KJ929718| PRGD_OTU211_otuREP_0f7d84e0506ead0a41999a739bf3d61d, putative proteorhodopsin gene, partial cds. PRGD_OTU211_otuREP_0f7d84e0506ead0a41999a739bf3d61d, putative proteorhodopsin gene, partial cds. KJ929718 [[proteorhodopsin/Proteobacterial-like cluster 2/Photobacterium Gammaproteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Photobacterium Gammaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTCATCACGGTACCGCTTCAGATCGTAGAATTCTATCTTATCTTGGCTGCCATTGCAGTTGTTCCTGCTGCTCTTTTCTGGCGATTGTTGGTGGCTTCTTTGGTCATGCTGGTCGGTGGCTATCTCGGCGAAGCTGGTTTCATGAATGCCACAGTTGGATTCGCGATTGGTATGGCTGGTTGGATCTACATCATCTATGAAGTATTTGCTGGCGAAGCGAGCAAAATCAACTCTGGTTCAGCTAACCCTGCATCACAAAAAGCGTTCAACGCATTACGTCTGATAGTAACAGTA FITVPLQIVEFYLILAAIAVVPAALFWRLLVASLVMLVGGYLGEAGFMNATVGFAIGMAGWIYIIYEVFAGEASKINSGSANPASQKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCATCACGGTACCGCTTCAGATCGTAGAATTCTATCTTATCTTGGCTGCC---------ATT---GCAGTTGTTCCTGCT---GCTCTT------------------------------------TTCTGGCGA---TTGTTGGTGGCTTCTTTGGTCATGCTGGTCGGTGGCTATCTCGGCGAA---------GCT------------------GGT------TTC---------------------------------ATG------------------------------------------------------------------AATGCC------------------ACAGTTGGA---TTCGCGATTGGTATGGCTGGTTGGATCTACATCATCTATGAAGTA---------------TTT------GCT---GGCGAAGCGAGCAAAATCAACTCTGGT------TCA---GCTAACCCTGCATCA---CAA---AAA---GCG---TTC---AAC---GCATTA---CGTCTGATAGTAACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIVEFYLILAA---I-AVVPA-AL------------FWR-LLVASLVMLVGGYLGE---A------G--F-----------M----------------------NA------TVG-FAIGMAGWIYIIYEV-----F--A-GEASKINSG--S-ANPAS-Q-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo2-Photobacterium]_KJ929719 [unk-Proteo2-Photobacterium] PRGD_OTU211_b0d02035d0b88ffcb4156628f37aaea4 gb|KJ929719| PRGD_OTU211_b0d02035d0b88ffcb4156628f37aaea4, putative proteorhodopsin gene, partial cds. PRGD_OTU211_b0d02035d0b88ffcb4156628f37aaea4, putative proteorhodopsin gene, partial cds. KJ929719 [[proteorhodopsin/Proteobacterial-like cluster 2/Photobacterium Gammaproteobacterial-like subcluster]] proteorhodopsin Proteobacterial-like cluster 2 Photobacterium Gammaproteobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTCATCACTGTCCCCCTTCAAATCGTTGAATTTTATTTGATACTTGCCGCCATCACCATTGTGCCAGCAGCATTGTTTTGGCGTTTGTTGGTGGCTTCCCTTGTTATGCTGGTTGGTGGCTATCTTGGCGAAGCTGGTTTCATGAATGCAACAGCTGCATTCGCCATCGGAATGTCAGGTTGGTTGTACATCATCTACGAAGTCTTCGCAGGTCAAGCCAGCAAGATCAATTCCGAGTCAGCCAACCCAGCTTCACAAAAAGCTTTCAATGCGCTGCGCCTCATTGTCACAGTT FITVPLQIVEFYLILAAITIVPAALFWRLLVASLVMLVGGYLGEAGFMNATAAFAIGMSGWLYIIYEVFAGQASKINSESANPASQKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCATCACTGTCCCCCTTCAAATCGTTGAATTTTATTTGATACTTGCCGCC---------ATC---ACCATTGTGCCAGCA---GCATTG------------------------------------TTTTGGCGT---TTGTTGGTGGCTTCCCTTGTTATGCTGGTTGGTGGCTATCTTGGCGAA---------GCT------------------GGT------TTC---------------------------------ATG------------------------------------------------------------------AATGCA------------------ACAGCTGCA---TTCGCCATCGGAATGTCAGGTTGGTTGTACATCATCTACGAAGTC---------------TTC------GCA---GGTCAAGCCAGCAAGATCAATTCCGAG------TCA---GCCAACCCAGCTTCA---CAA---AAA---GCT---TTC---AAT---GCGCTG---CGCCTCATTGTCACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIVEFYLILAA---I-TIVPA-AL------------FWR-LLVASLVMLVGGYLGE---A------G--F-----------M----------------------NA------TAA-FAIGMSGWLYIIYEV-----F--A-GQASKINSE--S-ANPAS-Q-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ929042 [unk-euryarch-HF70_59C08] PRGD_OTU070_509492ac87902a401077871896e3a88a gb|KJ929042| PRGD_OTU070_509492ac87902a401077871896e3a88a, putative proteorhodopsin gene, partial cds. PRGD_OTU070_509492ac87902a401077871896e3a88a, putative proteorhodopsin gene, partial cds. KJ929042 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTGATCACAGTTCCACTTCAGGTAGTCGAGTTCTACCTGATTATGGCGGCTATCGGAGCAGCCACCTTCGCCATGTTCAGAAACCTGATGGCAGCATCAATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAGTCTGGGGCTTGGGATCTCTTCGGAGACATGAGCACTGAGATCTGGTGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTACGCACTCTGGGCTGGAGATGTCAAGGAGGCATCAGAGTCCGGGAGCGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTATCCGTC LITVPLQVVEFYLIMAAIGAATFAMFRNLMAASIVMLVAGFFGESGAWDLFGDMSTEIWWVIGMAGWGYILYALWAGDVKEASESGSDGVQFAFTSMRWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTTCCACTTCAGGTAGTCGAGTTCTACCTGATTATGGCGGCT---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGAAAC---CTGATGGCAGCATCAATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAG---------TCT------------------GGG------GCT---------------------------------TGG------GATCTC------TTCGGA---------GAC---------------------------ATGAGCACT------------------GAGATCTGG---TGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTACGCACTC---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGAG------TCC---GGGAGCGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTATCCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------W--DL--FG---D---------MST------EIW-WVIGMAGWGYILYAL-----W--A-GDVKE-ASE--S-GSDGV-Q-F-A-F-T-SM-RWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ929044 [unk-euryarch-HF70_59C08] PRGD_OTU070_692dba1a20942b6d29b976cf8d934a92 gb|KJ929044| PRGD_OTU070_692dba1a20942b6d29b976cf8d934a92, putative proteorhodopsin gene, partial cds. PRGD_OTU070_692dba1a20942b6d29b976cf8d934a92, putative proteorhodopsin gene, partial cds. KJ929044 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTGATCACAGTTCCACTTCAGGTAGTCGAGTTCTACCTGATTATGGCAGCTATCGGAGCAGCCACCTTCGCCATGTTCAGAAACCTGATGGCAGCATCAATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAGTCTGGAGCTTGGGATCTCTTCGGAGACTCGAGCACTGAGATCTGGTGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTACGCACTCTGGGCCGGAGATGTCAAGGAGGCATCAGAGTCCGGGAGCGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTATCCGTC LITVPLQVVEFYLIMAAIGAATFAMFRNLMAASIVMLVAGFFGESGAWDLFGDSSTEIWWVIGMAGWGYILYALWAGDVKEASESGSDGVQFAFTSMRWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTTCCACTTCAGGTAGTCGAGTTCTACCTGATTATGGCAGCT---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGAAAC---CTGATGGCAGCATCAATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAG---------TCT------------------GGA------GCT---------------------------------TGG------GATCTC------TTCGGA---------GAC---------------------------TCGAGCACT------------------GAGATCTGG---TGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTACGCACTC---------------TGG------GCC---GGAGATGTCAAGGAG---GCATCAGAG------TCC---GGGAGCGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTATCCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------W--DL--FG---D---------SST------EIW-WVIGMAGWGYILYAL-----W--A-GDVKE-ASE--S-GSDGV-Q-F-A-F-T-SM-RWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ929047 [unk-euryarch-HF70_59C08] PRGD_OTU070_b4cd04d477f9c47fe44bae91983b5fa2 gb|KJ929047| PRGD_OTU070_b4cd04d477f9c47fe44bae91983b5fa2, putative proteorhodopsin gene, partial cds. PRGD_OTU070_b4cd04d477f9c47fe44bae91983b5fa2, putative proteorhodopsin gene, partial cds. KJ929047 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTGATCACAGTTCCACTTCAGGTAGTCGAATTCTACCTGATTATGGCAGCTATCGGAGCAGCCACCTTCGCCATGTTCAGAAACCTGATGGCAGCATCAATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAGTCAGGAGCTTGGGATCTCTTCGGAGGCTCGAGCACTGAGATCTGGTGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTACGCACTCTGGGCTGGAGATGTCAAGGAGGCATCAGAGTCCGGGAGCGATGGCGTGAAGTTCGCCTTCACCTCGATGAGGTGGATCGTATCCGTC LITVPLQVVEFYLIMAAIGAATFAMFRNLMAASIVMLVAGFFGESGAWDLFGGSSTEIWWVIGMAGWGYILYALWAGDVKEASESGSDGVKFAFTSMRWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTTCCACTTCAGGTAGTCGAATTCTACCTGATTATGGCAGCT---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGAAAC---CTGATGGCAGCATCAATCGTGATGCTTGTAGCTGGTTTCTTCGGCGAG---------TCA------------------GGA------GCT---------------------------------TGG------GATCTC------TTCGGA---------GGC---------------------------TCGAGCACT------------------GAGATCTGG---TGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTACGCACTC---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGAG------TCC---GGGAGCGATGGCGTG---AAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTATCCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------W--DL--FG---G---------SST------EIW-WVIGMAGWGYILYAL-----W--A-GDVKE-ASE--S-GSDGV-K-F-A-F-T-SM-RWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ929039 [unk-euryarch-HF70_59C08] PRGD_OTU070_3583fe4e07584bd6c1ec448fd55215c4 gb|KJ929039| PRGD_OTU070_3583fe4e07584bd6c1ec448fd55215c4, putative proteorhodopsin gene, partial cds. PRGD_OTU070_3583fe4e07584bd6c1ec448fd55215c4, putative proteorhodopsin gene, partial cds. KJ929039 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTGATTACCGTGCCACTTCAGGTAGTCGAGTTCTACTTGATTATGGCAGCTATCGGAGCAGCCACCTTCGCCATGTTCAGGAACCTGATGGCAGCATCGATCGTGATGCTCGTAGCTGGTTTCTTCGGCGAGTCTGGGGCTTGGGAACTCTTCGGAGACATGAGCACTGAGATCTGGTGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTCTGGGCTGGAGATGTCAAGGAGGCATCAGAGACCGGGAGCGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTGTCCGTC LITVPLQVVEFYLIMAAIGAATFAMFRNLMAASIVMLVAGFFGESGAWELFGDMSTEIWWVIGMAGWGYILYALWAGDVKEASETGSDGVQFAFTSMRWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACCGTGCCACTTCAGGTAGTCGAGTTCTACTTGATTATGGCAGCT---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGGAAC---CTGATGGCAGCATCGATCGTGATGCTCGTAGCTGGTTTCTTCGGCGAG---------TCT------------------GGG------GCT---------------------------------TGG------GAACTC------TTCGGA---------GAC---------------------------ATGAGCACT------------------GAGATCTGG---TGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTC---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGAG------ACC---GGGAGCGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTGTCCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------W--EL--FG---D---------MST------EIW-WVIGMAGWGYILYAL-----W--A-GDVKE-ASE--T-GSDGV-Q-F-A-F-T-SM-RWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ929045 [unk-euryarch-HF70_59C08] PRGD_OTU070_920d11c3402b055529b9cda0f4c3eccc gb|KJ929045| PRGD_OTU070_920d11c3402b055529b9cda0f4c3eccc, putative proteorhodopsin gene, partial cds. PRGD_OTU070_920d11c3402b055529b9cda0f4c3eccc, putative proteorhodopsin gene, partial cds. KJ929045 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATTACCGTGCCACTTCAGGTAGTTGAGTTCTACTTGATTATGGCAGCTATCGGAGCAGCCACCTTCGCCATGTTCAGGAACCTGATGGCAGCATCAATCGTGATGCTAGTAGCTGGTTTCTTCGGCGAGTCTGGAGCTTGGGAACTCTTCGGAGACATGAGCACTGAGATCTGGTGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTATGGGCTGGAGATGTCAAGGAGGCATCAGAGTCCGGGAGCGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTGTCCGTC LITVPLQVVEFYLIMAAIGAATFAMFRNLMAASIVMLVAGFFGESGAWELFGDMSTEIWWVIGMAGWGYILYALWAGDVKEASESGSDGVQFAFTSMRWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACCGTGCCACTTCAGGTAGTTGAGTTCTACTTGATTATGGCAGCT---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGGAAC---CTGATGGCAGCATCAATCGTGATGCTAGTAGCTGGTTTCTTCGGCGAG---------TCT------------------GGA------GCT---------------------------------TGG------GAACTC------TTCGGA---------GAC---------------------------ATGAGCACT------------------GAGATCTGG---TGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTA---------------TGG------GCT---GGAGATGTCAAGGAG---GCATCAGAG------TCC---GGGAGCGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTGTCCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------W--EL--FG---D---------MST------EIW-WVIGMAGWGYILYAL-----W--A-GDVKE-ASE--S-GSDGV-Q-F-A-F-T-SM-RWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ929048 [unk-euryarch-HF70_59C08] PRGD_OTU070_ece37d0428459a97dd9827d260efb3cf gb|KJ929048| PRGD_OTU070_ece37d0428459a97dd9827d260efb3cf, putative proteorhodopsin gene, partial cds. PRGD_OTU070_ece37d0428459a97dd9827d260efb3cf, putative proteorhodopsin gene, partial cds. KJ929048 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -33.28, 45.35) CTGATTACCGTGCCACTTCAGGTAGTCGAGTTCTACTTGATTATGGCAGCTATCGGAGCAGCCACCTTCGCCATGTTCAGGAACCTGATGGCAGCATCGATCGTGATGCTCGTAGCTGGTTTCTTCGGCGAGTCTGGAGCTTGGGAACTCTTCGGAGACATGAGCACTGAGATCTGGTGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTATGGGCTGGAGATGTCAAGGAAGCATCAGAGTCCGGGAGCGATGGCGTGCAGTTCGCCTTCACCTCGATGAGGTGGATCGTATCCGTC LITVPLQVVEFYLIMAAIGAATFAMFRNLMAASIVMLVAGFFGESGAWELFGDMSTEIWWVIGMAGWGYILYALWAGDVKEASESGSDGVQFAFTSMRWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACCGTGCCACTTCAGGTAGTCGAGTTCTACTTGATTATGGCAGCT---------ATC---GGAGCAGCCACCTTC---GCCATG------------------------------------TTCAGGAAC---CTGATGGCAGCATCGATCGTGATGCTCGTAGCTGGTTTCTTCGGCGAG---------TCT------------------GGA------GCT---------------------------------TGG------GAACTC------TTCGGA---------GAC---------------------------ATGAGCACT------------------GAGATCTGG---TGGGTCATCGGCATGGCAGGATGGGGTTACATCCTCTATGCACTA---------------TGG------GCT---GGAGATGTCAAGGAA---GCATCAGAG------TCC---GGGAGCGATGGCGTG---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTATCCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------W--EL--FG---D---------MST------EIW-WVIGMAGWGYILYAL-----W--A-GDVKE-ASE--S-GSDGV-Q-F-A-F-T-SM-RWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ929041 [unk-euryarch-HF70_59C08] PRGD_OTU070_49029b877162f6e38aa9992f580aece1 gb|KJ929041| PRGD_OTU070_49029b877162f6e38aa9992f580aece1, putative proteorhodopsin gene, partial cds. PRGD_OTU070_49029b877162f6e38aa9992f580aece1, putative proteorhodopsin gene, partial cds. KJ929041 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATCACCGTGCCGCTACAGGTAGTAGAGTTCTACCTAATCATGGCAGCAATCGGAGTAGGAACTTTCGCCATGTTCAGGAATCTCATGGGTGCATCGATCATCATGCTCGTAGCCGGATTCTTCGGCGAGTCAGGAGCATGGGAGCTCTTCGGAGACCTTAGCACCGAGATCTGGTGGGCCATCGGTATGGCAGGATGGGGTTACATCCTGTATGAATTATGGCAAGGCGACGTCAAAGCAGCATCTGCTTCCGGCAGCGATGGCGTTCAGTTCGCCTTCAAAGCCATGAGAGCAATCGTTACCTTC LITVPLQVVEFYLIMAAIGVGTFAMFRNLMGASIIMLVAGFFGESGAWELFGDLSTEIWWAIGMAGWGYILYELWQGDVKAASASGSDGVQFAFKAMRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTGCCGCTACAGGTAGTAGAGTTCTACCTAATCATGGCAGCA---------ATC---GGAGTAGGAACTTTC---GCCATG------------------------------------TTCAGGAAT---CTCATGGGTGCATCGATCATCATGCTCGTAGCCGGATTCTTCGGCGAG---------TCA------------------GGA------GCA---------------------------------TGG------GAGCTC------TTCGGA---------GAC---------------------------CTTAGCACC------------------GAGATCTGG---TGGGCCATCGGTATGGCAGGATGGGGTTACATCCTGTATGAATTA---------------TGG------CAA---GGCGACGTCAAAGCA---GCATCTGCT------TCC---GGCAGCGATGGCGTT---CAG---TTC---GCC---TTC---AAA---GCCATG---AGAGCAATCGTTACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLIMAA---I-GVGTF-AM------------FRN-LMGASIIMLVAGFFGE---S------G--A-----------W--EL--FG---D---------LST------EIW-WAIGMAGWGYILYEL-----W--Q-GDVKA-ASA--S-GSDGV-Q-F-A-F-K-AM-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ929040 [unk-euryarch-HF70_59C08] PRGD_OTU070_40811b2080d96c15aff80862677f6451 gb|KJ929040| PRGD_OTU070_40811b2080d96c15aff80862677f6451, putative proteorhodopsin gene, partial cds. PRGD_OTU070_40811b2080d96c15aff80862677f6451, putative proteorhodopsin gene, partial cds. KJ929040 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTGATCACCGTGCCTCTACAGGTAGTAGAATTCTACCTCATCATGGCTGCTATCGGAGCCGCAACCTTCGCTATGTTCAGGAATCTCATGGGTGCATCGATCGTCATGCTCGTAGCCGGATTCTTCGGCGAGTCAGGAGCATGGGAGCTCTTCGGAGACCTGAGCACAGAGATCTGGTGGGCCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTATGGCAAGGCGACGTCAAGGAAGCATCTGCCTCTGGCAGCGACGGCGTCCAGTTCGCCTTCAAAGCGATGAGAGCAATCGTTACCTTC LITVPLQVVEFYLIMAAIGAATFAMFRNLMGASIVMLVAGFFGESGAWELFGDLSTEIWWAIGMAGWGYILYALWQGDVKEASASGSDGVQFAFKAMRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTGCCTCTACAGGTAGTAGAATTCTACCTCATCATGGCTGCT---------ATC---GGAGCCGCAACCTTC---GCTATG------------------------------------TTCAGGAAT---CTCATGGGTGCATCGATCGTCATGCTCGTAGCCGGATTCTTCGGCGAG---------TCA------------------GGA------GCA---------------------------------TGG------GAGCTC------TTCGGA---------GAC---------------------------CTGAGCACA------------------GAGATCTGG---TGGGCCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTA---------------TGG------CAA---GGCGACGTCAAGGAA---GCATCTGCC------TCT---GGCAGCGACGGCGTC---CAG---TTC---GCC---TTC---AAA---GCGATG---AGAGCAATCGTTACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMGASIVMLVAGFFGE---S------G--A-----------W--EL--FG---D---------LST------EIW-WAIGMAGWGYILYAL-----W--Q-GDVKE-ASA--S-GSDGV-Q-F-A-F-K-AM-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ929043 [unk-euryarch-HF70_59C08] PRGD_OTU070_5f5a5b057fb5b735108f3d82758c92da gb|KJ929043| PRGD_OTU070_5f5a5b057fb5b735108f3d82758c92da, putative proteorhodopsin gene, partial cds. PRGD_OTU070_5f5a5b057fb5b735108f3d82758c92da, putative proteorhodopsin gene, partial cds. KJ929043 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATCACCGTGCCTCTGCAGGTAGTAGAGTTCTACCTCATCATGGCAGCTATCGGAGCAGCAACCTTCGCCATGTTCAGGAACCTCATGGGAGCATCGATCGTCATGCTCGTAGCCGGATTCTTCGGTGAGTCAGGAGCATGGGATGTCTTCGGAGACATGAGCACCGAGATCTGGTGGGTCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTGTGGCAAGGCGACGTCAAGGAGGCATCTGCTTCCGGCAGCGACGGCGTCCAGTTCGCCTTCACCTCGATGAGGTGGATCGTGACCGTC LITVPLQVVEFYLIMAAIGAATFAMFRNLMGASIVMLVAGFFGESGAWDVFGDMSTEIWWVIGMAGWGYILYALWQGDVKEASASGSDGVQFAFTSMRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTGCCTCTGCAGGTAGTAGAGTTCTACCTCATCATGGCAGCT---------ATC---GGAGCAGCAACCTTC---GCCATG------------------------------------TTCAGGAAC---CTCATGGGAGCATCGATCGTCATGCTCGTAGCCGGATTCTTCGGTGAG---------TCA------------------GGA------GCA---------------------------------TGG------GATGTC------TTCGGA---------GAC---------------------------ATGAGCACC------------------GAGATCTGG---TGGGTCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTG---------------TGG------CAA---GGCGACGTCAAGGAG---GCATCTGCT------TCC---GGCAGCGACGGCGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTGACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMGASIVMLVAGFFGE---S------G--A-----------W--DV--FG---D---------MST------EIW-WVIGMAGWGYILYAL-----W--Q-GDVKE-ASA--S-GSDGV-Q-F-A-F-T-SM-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ929046 [unk-euryarch-HF70_59C08] PRGD_OTU070_a4fce06b325c5b63055cd9b07357b933 gb|KJ929046| PRGD_OTU070_a4fce06b325c5b63055cd9b07357b933, putative proteorhodopsin gene, partial cds. PRGD_OTU070_a4fce06b325c5b63055cd9b07357b933, putative proteorhodopsin gene, partial cds. KJ929046 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTGATCACCGTGCCGCTACAGGTAGTAGAGTTCTACCTGATCATGGCAGCGATCGGAGCAGCAACCTTCGCCATGTTCAGGAACCTCATGGGAGCATCGATCGTCATGCTAGTAGCCGGATTCTTCGGCGAGTCAGGAGCATGGGATGTCTTCGGAGGCTCAAGCGACATCATCTGGTTTGTCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTATGGCAAGGTGACGTCAAGGAGGCATCTGCTTCCGGCAGCGACGGCGTCCAGTTCGCCTTCACCTCGATGAGGTGGATCGTTACCGTC LITVPLQVVEFYLIMAAIGAATFAMFRNLMGASIVMLVAGFFGESGAWDVFGGSSDIIWFVIGMAGWGYILYALWQGDVKEASASGSDGVQFAFTSMRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTGCCGCTACAGGTAGTAGAGTTCTACCTGATCATGGCAGCG---------ATC---GGAGCAGCAACCTTC---GCCATG------------------------------------TTCAGGAAC---CTCATGGGAGCATCGATCGTCATGCTAGTAGCCGGATTCTTCGGCGAG---------TCA------------------GGA------GCA---------------------------------TGG------GATGTC------TTCGGA---------GGC---------------------------TCAAGCGAC------------------ATCATCTGG---TTTGTCATCGGTATGGCAGGATGGGGTTACATCCTGTATGCCCTA---------------TGG------CAA---GGTGACGTCAAGGAG---GCATCTGCT------TCC---GGCAGCGACGGCGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTTACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMGASIVMLVAGFFGE---S------G--A-----------W--DV--FG---G---------SSD------IIW-FVIGMAGWGYILYAL-----W--Q-GDVKE-ASA--S-GSDGV-Q-F-A-F-T-SM-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ929038 [unk-euryarch-HF70_59C08] PRGD_OTU070_00362349974483729233f00147449c5f gb|KJ929038| PRGD_OTU070_00362349974483729233f00147449c5f, putative proteorhodopsin gene, partial cds. PRGD_OTU070_00362349974483729233f00147449c5f, putative proteorhodopsin gene, partial cds. KJ929038 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) CTGATCACCGTACCGCTACAGGTTGTAGAGTTCTACCTGATTATGGCAGCAATCGGAGCAGCTACCTTCGCTATGTTCAGGAACCTAATGGCAGCATCAATCGTGATGCTCGTAGCTGGTTTCTTCGGCGAGTCAGGAGCATGGGATCTCTTCGGGGACTCAAGCACCGAGATCTGGTGGGTCATCGGAATGGCAGGATGGGGTTACATCCTCTTTGCACTCTGGAATGGCGATGTCAAGGAGGCATCCGAGTCCGGCAGCGATGGCGTGCAATTTGCATTCACCTCAATGAGGTGGATTGTA LITVPLQVVEFYLIMAAIGAATFAMFRNLMAASIVMLVAGFFGESGAWDLFGDSSTEIWWVIGMAGWGYILFALWNGDVKEASESGSDGVQFAFTSMRWIV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTACCGCTACAGGTTGTAGAGTTCTACCTGATTATGGCAGCA---------ATC---GGAGCAGCTACCTTC---GCTATG------------------------------------TTCAGGAAC---CTAATGGCAGCATCAATCGTGATGCTCGTAGCTGGTTTCTTCGGCGAG---------TCA------------------GGA------GCA---------------------------------TGG------GATCTC------TTCGGG---------GAC---------------------------TCAAGCACC------------------GAGATCTGG---TGGGTCATCGGAATGGCAGGATGGGGTTACATCCTCTTTGCACTC---------------TGG------AAT---GGCGATGTCAAGGAG---GCATCCGAG------TCC---GGCAGCGATGGCGTG---CAA---TTT---GCA---TTC---ACC---TCAATG---AGGTGGATTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------W--DL--FG---D---------SST------EIW-WVIGMAGWGYILFAL-----W--N-GDVKE-ASE--S-GSDGV-Q-F-A-F-T-SM-RWIV---------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ929037 [unk-euryarch-HF70_59C08] PRGD_OTU070_otuREP_a75e93659e845f55eb323cddd12f4523 gb|KJ929037| PRGD_OTU070_otuREP_a75e93659e845f55eb323cddd12f4523, putative proteorhodopsin gene, partial cds. PRGD_OTU070_otuREP_a75e93659e845f55eb323cddd12f4523, putative proteorhodopsin gene, partial cds. KJ929037 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) CTGATCACCGTACCGCTACAGGTTGTAGAGTTCTACCTGATTATGGCAGCAATCGGAGCAGCTACCTTCGCTATGTTCAGGAACCTAATGGCAGCATCAATCGTGATGCTCGTAGCTGGTTTCTTCGGCGAGTCAGGAGCATGGGATCTCTTCGGGGACTCAAGCACCGAGATCTGGTGGGTCATCGGAATGGCAGGATGGGGTTACATCCTCTTTGCACTCTGGAATGGCGATGTCAAGGAGGCATCCGAGTCCGGCAGCGATGGCGTGCAATTTGCATTCACCTCAATGAGGTGGATTGTAACGGTT LITVPLQVVEFYLIMAAIGAATFAMFRNLMAASIVMLVAGFFGESGAWDLFGDSSTEIWWVIGMAGWGYILFALWNGDVKEASESGSDGVQFAFTSMRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTACCGCTACAGGTTGTAGAGTTCTACCTGATTATGGCAGCA---------ATC---GGAGCAGCTACCTTC---GCTATG------------------------------------TTCAGGAAC---CTAATGGCAGCATCAATCGTGATGCTCGTAGCTGGTTTCTTCGGCGAG---------TCA------------------GGA------GCA---------------------------------TGG------GATCTC------TTCGGG---------GAC---------------------------TCAAGCACC------------------GAGATCTGG---TGGGTCATCGGAATGGCAGGATGGGGTTACATCCTCTTTGCACTC---------------TGG------AAT---GGCGATGTCAAGGAG---GCATCCGAG------TCC---GGCAGCGATGGCGTG---CAA---TTT---GCA---TTC---ACC---TCAATG---AGGTGGATTGTAACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLIMAA---I-GAATF-AM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------W--DL--FG---D---------SST------EIW-WVIGMAGWGYILFAL-----W--N-GDVKE-ASE--S-GSDGV-Q-F-A-F-T-SM-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ929397 [unk-euryarch-HF70_59C08] PRGD_OTU117_otuREP_8e93ea07d6a7859c4701cec472592a6f gb|KJ929397| PRGD_OTU117_otuREP_8e93ea07d6a7859c4701cec472592a6f, putative proteorhodopsin gene, partial cds. PRGD_OTU117_otuREP_8e93ea07d6a7859c4701cec472592a6f, putative proteorhodopsin gene, partial cds. KJ929397 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTAATAACCGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCTATCGGTGTGGGAACTTTCGTCATGTTCAGGAACCTCATGGCCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGAGAGTCCGGAGCAATGGATGGCACACTAGAGCTATCCTCCACAGTTTGGTGGATCATTGGAATGGCAGGATGGTTATACATCCTATACGAGCTATGGTCCGGAGACGTCAAGAAGGCCTCAGAATCTGGTAGCCCAGGAGTCCAGTTCGCCTTCACCTCGATGAGGTGGATCGTATCTGTC LITVPLQVVEFYLILAAIGVGTFVMFRNLMAASIVMLVAGFFGESGAMDGTLELSSTVWWIIGMAGWLYILYELWSGDVKKASESGSPGVQFAFTSMRWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATAACCGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGTGTGGGAACTTTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGCCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGAGAG---------TCC------------------GGA------GCA---------------------------------ATG------GATGGC------ACACTA---------GAG---------------------------CTATCCTCC------------------ACAGTTTGG---TGGATCATTGGAATGGCAGGATGGTTATACATCCTATACGAGCTA---------------TGG------TCC---GGAGACGTCAAGAAG---GCCTCAGAA------TCT---GGTAGCCCAGGAGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATCGTATCTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------M--DG--TL---E---------LSS------TVW-WIIGMAGWLYILYEL-----W--S-GDVKK-ASE--S-GSPGV-Q-F-A-F-T-SM-RWIVSV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ928330 [unk-euryarch-HF70_59C08] PRGD_OTU032_28dfb57be31614ec0bd44755594babab gb|KJ928330| PRGD_OTU032_28dfb57be31614ec0bd44755594babab, putative proteorhodopsin gene, partial cds. PRGD_OTU032_28dfb57be31614ec0bd44755594babab, putative proteorhodopsin gene, partial cds. KJ928330 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTCATAACAGTCCCTCTACAAGTTGTAGAGTTCTACCTAATCCTCGCCGCTATCGGTGTGGGAACTTTCGTCATGTTCAGGAACCTCATGGTCGCATCCTTAGTCATGCTAGTAGCAGGATTCTTCGGAGAGTCCGGAGCTATGGACGGGACTGCTCTCGAGTTCTCAGCAGAAATCTGGTGGGCCATTGGAATGGCAGGATGGGGATACATCCTATACGAGCTATGGCAAGGTGACGTCAAGGAGGCATCTGCTTCTGGTAGCGATGGCGTCCAGTTCGCCTTCACCTCGATGAGGTGGATTGTTACCGTC LITVPLQVVEFYLILAAIGVGTFVMFRNLMVASLVMLVAGFFGESGAMDGTALEFSAEIWWAIGMAGWGYILYELWQGDVKEASASGSDGVQFAFTSMRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATAACAGTCCCTCTACAAGTTGTAGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGTGTGGGAACTTTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGTCGCATCCTTAGTCATGCTAGTAGCAGGATTCTTCGGAGAG---------TCC------------------GGA------GCT---------------------------------ATG------GACGGGACT---GCTCTC---------GAG---------------------------TTCTCAGCA------------------GAAATCTGG---TGGGCCATTGGAATGGCAGGATGGGGATACATCCTATACGAGCTA---------------TGG------CAA---GGTGACGTCAAGGAG---GCATCTGCT------TCT---GGTAGCGATGGCGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATTGTTACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMVASLVMLVAGFFGE---S------G--A-----------M--DGT-AL---E---------FSA------EIW-WAIGMAGWGYILYEL-----W--Q-GDVKE-ASA--S-GSDGV-Q-F-A-F-T-SM-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ928341 [unk-euryarch-HF70_59C08] PRGD_OTU032_8051ffed93985c6caf041d4beabe4c63 gb|KJ928341| PRGD_OTU032_8051ffed93985c6caf041d4beabe4c63, putative proteorhodopsin gene, partial cds. PRGD_OTU032_8051ffed93985c6caf041d4beabe4c63, putative proteorhodopsin gene, partial cds. KJ928341 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) CTAATAACAGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCTATCGGTGTGGGAACTTTCGTCATGTTCAGGAACCTCATGGTCGCATCCTTAGTCATGCTAGTAGCAGGATTCTTCGGAGAGTCCGGAGCTATGGACGGGACTGCTCTCGAGTTCTCAGCAGAAATCTGGTGGGCCATTGGAATGGCAGGATGGGGATACATCCTATACGAGCTATGGCAGGGTGACGTCAAGGAGGCATCTGCTTCTGGTAGCGATGGCGTCCAGTTCGCCTTCACCTCGATGAGGTGGATTGTTACCGTC LITVPLQVVEFYLILAAIGVGTFVMFRNLMVASLVMLVAGFFGESGAMDGTALEFSAEIWWAIGMAGWGYILYELWQGDVKEASASGSDGVQFAFTSMRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATAACAGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGTGTGGGAACTTTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGTCGCATCCTTAGTCATGCTAGTAGCAGGATTCTTCGGAGAG---------TCC------------------GGA------GCT---------------------------------ATG------GACGGGACT---GCTCTC---------GAG---------------------------TTCTCAGCA------------------GAAATCTGG---TGGGCCATTGGAATGGCAGGATGGGGATACATCCTATACGAGCTA---------------TGG------CAG---GGTGACGTCAAGGAG---GCATCTGCT------TCT---GGTAGCGATGGCGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATTGTTACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMVASLVMLVAGFFGE---S------G--A-----------M--DGT-AL---E---------FSA------EIW-WAIGMAGWGYILYEL-----W--Q-GDVKE-ASA--S-GSDGV-Q-F-A-F-T-SM-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ928342 [unk-euryarch-HF70_59C08] PRGD_OTU032_81fede4a4ada06a0a57ce54cb1d9f1bd gb|KJ928342| PRGD_OTU032_81fede4a4ada06a0a57ce54cb1d9f1bd, putative proteorhodopsin gene, partial cds. PRGD_OTU032_81fede4a4ada06a0a57ce54cb1d9f1bd, putative proteorhodopsin gene, partial cds. KJ928342 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) CTCATAACAGTCCCTCTGCAGGTAGTAGAGTTCTACCTAATACTCGCCGCTATCGGTGTGGGAACTTTCGTCATGTTCAGGAACCTCATGGTCGCATCCTTAGTCATGCTAGTAGCAGGATTCTTCGGAGAGTCCGGAGCTATGGACGGGACTGCTCTCGAGTTCTCACCAGAAATCTGGTGGGTCATTGGAATGGCAGGATGGGGATACATCCTATACGAGCTATGGCAAGGTGACGTCAAGGAGGCATCTGCTTCTGGTAGCGATGGCGTCCAGTTCGCCTTCACCTCGATGAGGTGGATTGTTACCGTC LITVPLQVVEFYLILAAIGVGTFVMFRNLMVASLVMLVAGFFGESGAMDGTALEFSPEIWWVIGMAGWGYILYELWQGDVKEASASGSDGVQFAFTSMRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATAACAGTCCCTCTGCAGGTAGTAGAGTTCTACCTAATACTCGCCGCT---------ATC---GGTGTGGGAACTTTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGTCGCATCCTTAGTCATGCTAGTAGCAGGATTCTTCGGAGAG---------TCC------------------GGA------GCT---------------------------------ATG------GACGGGACT---GCTCTC---------GAG---------------------------TTCTCACCA------------------GAAATCTGG---TGGGTCATTGGAATGGCAGGATGGGGATACATCCTATACGAGCTA---------------TGG------CAA---GGTGACGTCAAGGAG---GCATCTGCT------TCT---GGTAGCGATGGCGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATTGTTACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMVASLVMLVAGFFGE---S------G--A-----------M--DGT-AL---E---------FSP------EIW-WVIGMAGWGYILYEL-----W--Q-GDVKE-ASA--S-GSDGV-Q-F-A-F-T-SM-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ928329 [unk-euryarch-HF70_59C08] PRGD_OTU032_2288a296c24095d07fd935da28a31a1f gb|KJ928329| PRGD_OTU032_2288a296c24095d07fd935da28a31a1f, putative proteorhodopsin gene, partial cds. PRGD_OTU032_2288a296c24095d07fd935da28a31a1f, putative proteorhodopsin gene, partial cds. KJ928329 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (69.5142, -133.4185), Indian Ocean (-35.05, 23.73; -33.28, 45.35) CTAATAACAGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCTATCGGTGTGGGAACTTTCGTCATGTTCAGGAACCTCATGGTCGCATCCTTAGTCATGCTAGTAGCAGGATTCTTCGGAGAGTCCGGAGCTATGGACGGGACTGCTCTCGAGTTCTCAGCAGAAATCTGGTGGGTCATTGGAATGGCAGGATGGGGATACATCCTATACGAGCTATGGCAAGGTGACGTCAAGGAGGCATCTGCTTCTGGTAGTGATGGCGTCCAGTTCGCCTTCACCTCGATGAGGTGGATTGTTACCGTC LITVPLQVVEFYLILAAIGVGTFVMFRNLMVASLVMLVAGFFGESGAMDGTALEFSAEIWWVIGMAGWGYILYELWQGDVKEASASGSDGVQFAFTSMRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATAACAGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGTGTGGGAACTTTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGTCGCATCCTTAGTCATGCTAGTAGCAGGATTCTTCGGAGAG---------TCC------------------GGA------GCT---------------------------------ATG------GACGGGACT---GCTCTC---------GAG---------------------------TTCTCAGCA------------------GAAATCTGG---TGGGTCATTGGAATGGCAGGATGGGGATACATCCTATACGAGCTA---------------TGG------CAA---GGTGACGTCAAGGAG---GCATCTGCT------TCT---GGTAGTGATGGCGTC---CAG---TTC---GCC---TTC---ACC---TCGATG---AGGTGGATTGTTACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMVASLVMLVAGFFGE---S------G--A-----------M--DGT-AL---E---------FSA------EIW-WVIGMAGWGYILYEL-----W--Q-GDVKE-ASA--S-GSDGV-Q-F-A-F-T-SM-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ928347 [unk-euryarch-HF70_59C08] PRGD_OTU032_c7bd369fefa469d5bd2b26f766cb6624 gb|KJ928347| PRGD_OTU032_c7bd369fefa469d5bd2b26f766cb6624, putative proteorhodopsin gene, partial cds. PRGD_OTU032_c7bd369fefa469d5bd2b26f766cb6624, putative proteorhodopsin gene, partial cds. KJ928347 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTAATAACAGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCTATCGGTGTGGGAACTTTCGTCATGTTCAGGAACCTCATGGTAGCATCCTTAGTCATGCTAGTAGCAGGATTCTTCGGAGAGTCCGGAGCTATGGATGGGACTGCTCTCGAGTTCTCAGCAGAAATCTGGTGGGTCATTGGAATGGCAGGATGGGGATACATCCTATACGAGCTATGGAAGGGTGACGTCAAGGAGGCATCTGCTTCTGGTAGCGATGGCGTCCAGTACGCCTTCACCTCGATGAGGTGGATTGTTACCGTC LITVPLQVVEFYLILAAIGVGTFVMFRNLMVASLVMLVAGFFGESGAMDGTALEFSAEIWWVIGMAGWGYILYELWKGDVKEASASGSDGVQYAFTSMRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATAACAGTCCCTCTACAGGTAGTAGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGTGTGGGAACTTTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGTAGCATCCTTAGTCATGCTAGTAGCAGGATTCTTCGGAGAG---------TCC------------------GGA------GCT---------------------------------ATG------GATGGGACT---GCTCTC---------GAG---------------------------TTCTCAGCA------------------GAAATCTGG---TGGGTCATTGGAATGGCAGGATGGGGATACATCCTATACGAGCTA---------------TGG------AAG---GGTGACGTCAAGGAG---GCATCTGCT------TCT---GGTAGCGATGGCGTC---CAG---TAC---GCC---TTC---ACC---TCGATG---AGGTGGATTGTTACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMVASLVMLVAGFFGE---S------G--A-----------M--DGT-AL---E---------FSA------EIW-WVIGMAGWGYILYEL-----W--K-GDVKE-ASA--S-GSDGV-Q-Y-A-F-T-SM-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ929398 [unk-euryarch-HF70_59C08] PRGD_OTU117_23c581fed89f27e08966744b5e921bcd gb|KJ929398| PRGD_OTU117_23c581fed89f27e08966744b5e921bcd, putative proteorhodopsin gene, partial cds. PRGD_OTU117_23c581fed89f27e08966744b5e921bcd, putative proteorhodopsin gene, partial cds. KJ929398 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -33.28, 45.35) CTAGTCACAGTACCACTTCAGGTCGTTGAGTTCTACCTAATCCTCGCCGCTATCGGCGTCGGTACCTTCGTGATGTTCAGGAACCTCATGGGTGCATCCATCGTCATGCTAGTGGCTGGATTCTTCGGCGAGTCCGGAGCCCTGAATGATACTGCGCTCGAGCTCAACTCGACCGTTTGGTGGTTCATCGGAATGCTTGGTTGGGGATACATCCTCTACGAGCTATGGTCCGGGGACGTCAAGGAGGCTGCAGCATCTGGCAGCCCGGGAGTGCAGTTCGCATTCGAATCAATGAGGATGATAGTTACCTTT LVTVPLQVVEFYLILAAIGVGTFVMFRNLMGASIVMLVAGFFGESGALNDTALELNSTVWWFIGMLGWGYILYELWSGDVKEAAASGSPGVQFAFESMRMIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGTCACAGTACCACTTCAGGTCGTTGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGCGTCGGTACCTTC---GTGATG------------------------------------TTCAGGAAC---CTCATGGGTGCATCCATCGTCATGCTAGTGGCTGGATTCTTCGGCGAG---------TCC------------------GGA------GCC---------------------------------CTGAAT---GATACT------GCGCTC---------GAG---------------------------CTCAACTCG------------------ACCGTTTGG---TGGTTCATCGGAATGCTTGGTTGGGGATACATCCTCTACGAGCTA---------------TGG------TCC---GGGGACGTCAAGGAG---GCTGCAGCA------TCT---GGCAGCCCGGGAGTG---CAG---TTC---GCA---TTC---GAA---TCAATG---AGGATGATAGTTACCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVTVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMGASIVMLVAGFFGE---S------G--A-----------LN-DT--AL---E---------LNS------TVW-WFIGMLGWGYILYEL-----W--S-GDVKE-AAA--S-GSPGV-Q-F-A-F-E-SM-RMIVTF-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ929400 [unk-euryarch-HF70_59C08] PRGD_OTU117_656b9547d38c0ad35a4a427568dd7d65 gb|KJ929400| PRGD_OTU117_656b9547d38c0ad35a4a427568dd7d65, putative proteorhodopsin gene, partial cds. PRGD_OTU117_656b9547d38c0ad35a4a427568dd7d65, putative proteorhodopsin gene, partial cds. KJ929400 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -33.28, 45.35) CTAGTCACAGTACCACTTCAGGTCGTTGAGTTCTACCTAATCCTCGCCGCTATCGGCGTCGGTACCTTCGTGATGTTCAGGAACCTCATGGGTGCATCCATCGTCATGCTAGTGGCTGGATTCTTCGGCGAGTCCGGAGCTATGGATGGTACGCTCGAGCTCAGCTCGACCGTTTGGTGGTTCATCGGAATGCTTGGTTGGGGATACATCCTCTACGAGCTATGGTCCGGGGACGTCAAGGAGGCTGCAGCATCTGGCAGCCCGGGAGTGCAGTTCGCATTCGAATCAATGAGGATGATAGTTACCTTT LVTVPLQVVEFYLILAAIGVGTFVMFRNLMGASIVMLVAGFFGESGAMDGTLELSSTVWWFIGMLGWGYILYELWSGDVKEAAASGSPGVQFAFESMRMIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGTCACAGTACCACTTCAGGTCGTTGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGCGTCGGTACCTTC---GTGATG------------------------------------TTCAGGAAC---CTCATGGGTGCATCCATCGTCATGCTAGTGGCTGGATTCTTCGGCGAG---------TCC------------------GGA------GCT---------------------------------ATG------GATGGT------ACGCTC---------GAG---------------------------CTCAGCTCG------------------ACCGTTTGG---TGGTTCATCGGAATGCTTGGTTGGGGATACATCCTCTACGAGCTA---------------TGG------TCC---GGGGACGTCAAGGAG---GCTGCAGCA------TCT---GGCAGCCCGGGAGTG---CAG---TTC---GCA---TTC---GAA---TCAATG---AGGATGATAGTTACCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVTVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMGASIVMLVAGFFGE---S------G--A-----------M--DG--TL---E---------LSS------TVW-WFIGMLGWGYILYEL-----W--S-GDVKE-AAA--S-GSPGV-Q-F-A-F-E-SM-RMIVTF-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ929399 [unk-euryarch-HF70_59C08] PRGD_OTU117_3ec196d54b53c35f4ba2ba171c2278f0 gb|KJ929399| PRGD_OTU117_3ec196d54b53c35f4ba2ba171c2278f0, putative proteorhodopsin gene, partial cds. PRGD_OTU117_3ec196d54b53c35f4ba2ba171c2278f0, putative proteorhodopsin gene, partial cds. KJ929399 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTGATAACAGTCCCTCTACAAGTAGTAGAGTTCTACCTAATCCTCGCCGCTATCGGTGTAGGAACTTTCGTCATGTTCAGGAACCTCATGGTTGCATCGATAGTCATGCTAGTAGCAGGATTCTTCGGAGAGTCCGGAGCTATGGACGGCACACTCGAGCTCAGCGCCACCGTTTGGTGGGTCATCGGAATGCTTGGATGGGGATACATCCTATACGAGCTATGGTCCGGAGACGTCAAGGAGGCCTCAGAATCTGGCAGCCCAGGAGTCCAGTACGCATTCAACGCAATGAGGATGATTGTTACCGTA LITVPLQVVEFYLILAAIGVGTFVMFRNLMVASIVMLVAGFFGESGAMDGTLELSATVWWVIGMLGWGYILYELWSGDVKEASESGSPGVQYAFNAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACAGTCCCTCTACAAGTAGTAGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGTGTAGGAACTTTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGTTGCATCGATAGTCATGCTAGTAGCAGGATTCTTCGGAGAG---------TCC------------------GGA------GCT---------------------------------ATG------GACGGC------ACACTC---------GAG---------------------------CTCAGCGCC------------------ACCGTTTGG---TGGGTCATCGGAATGCTTGGATGGGGATACATCCTATACGAGCTA---------------TGG------TCC---GGAGACGTCAAGGAG---GCCTCAGAA------TCT---GGCAGCCCAGGAGTC---CAG---TAC---GCA---TTC---AAC---GCAATG---AGGATGATTGTTACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMVASIVMLVAGFFGE---S------G--A-----------M--DG--TL---E---------LSA------TVW-WVIGMLGWGYILYEL-----W--S-GDVKE-ASE--S-GSPGV-Q-Y-A-F-N-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ929401 [unk-euryarch-HF70_59C08] PRGD_OTU117_c2f292b04b63a181b9358fb929dfd7b9 gb|KJ929401| PRGD_OTU117_c2f292b04b63a181b9358fb929dfd7b9, putative proteorhodopsin gene, partial cds. PRGD_OTU117_c2f292b04b63a181b9358fb929dfd7b9, putative proteorhodopsin gene, partial cds. KJ929401 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -33.28, 45.35) CTAATCACAGTGCCACTTCAAGTAGTCGAGTTCTACCTAATCCTCGCCGCTATCGGTGTGGGAACTTTCGTCATGTTCAGGAACCTCATGGCAGCATCCATCGTCATGCTAGTGGCTGGATTCTTCGGTGAGTCCGGAGCAATGGATGGTACTCTAGAGCTATCCTCCACAGTTTGGTGGTTCATCGGAATGCTTGGATGGGGATACATCCTGTACGAGCTATGGTCCGGAGATGTCAAGGAGGCTTCAGAGACTGGTAGCCCAAGCGTTCAGTACGCATTCAACTCAATGAGGATGATTGTAACTGTA LITVPLQVVEFYLILAAIGVGTFVMFRNLMAASIVMLVAGFFGESGAMDGTLELSSTVWWFIGMLGWGYILYELWSGDVKEASETGSPSVQYAFNSMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACAGTGCCACTTCAAGTAGTCGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGTGTGGGAACTTTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGCAGCATCCATCGTCATGCTAGTGGCTGGATTCTTCGGTGAG---------TCC------------------GGA------GCA---------------------------------ATG------GATGGT------ACTCTA---------GAG---------------------------CTATCCTCC------------------ACAGTTTGG---TGGTTCATCGGAATGCTTGGATGGGGATACATCCTGTACGAGCTA---------------TGG------TCC---GGAGATGTCAAGGAG---GCTTCAGAG------ACT---GGTAGCCCAAGCGTT---CAG---TAC---GCA---TTC---AAC---TCAATG---AGGATGATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------M--DG--TL---E---------LSS------TVW-WFIGMLGWGYILYEL-----W--S-GDVKE-ASE--T-GSPSV-Q-Y-A-F-N-SM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ928331 [unk-euryarch-HF70_59C08] PRGD_OTU032_314a3208bf8e3e2183e90f3cdf7b7967 gb|KJ928331| PRGD_OTU032_314a3208bf8e3e2183e90f3cdf7b7967, putative proteorhodopsin gene, partial cds. PRGD_OTU032_314a3208bf8e3e2183e90f3cdf7b7967, putative proteorhodopsin gene, partial cds. KJ928331 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTCATAACAGTCCCTCTGCAGGTAGTAGAGTTCTACCTAATCCTAGCCGCCATCGGCGTAGGAACTTTCGTCATGTTCAGGAACCTCATGGCTGCATCCATCGTCATGCTGGTGGCTGGATTCTTCGGTGAGTCCGGAGCTATGGACGGCACCATCGATCTGTCAGCAGAAATCTGGTGGGTCATCGGAATGGCTGGATGGGGATACATCCTATACGAGCTATGGTCCGGAGACGTCAAGGAGGCTTCAGAGACCGGTAGCCCAAGCGTTCAGTACGCATTCAACTCTATGAGATTGATCGTAACTGTT LITVPLQVVEFYLILAAIGVGTFVMFRNLMAASIVMLVAGFFGESGAMDGTIDLSAEIWWVIGMAGWGYILYELWSGDVKEASETGSPSVQYAFNSMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATAACAGTCCCTCTGCAGGTAGTAGAGTTCTACCTAATCCTAGCCGCC---------ATC---GGCGTAGGAACTTTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGCTGCATCCATCGTCATGCTGGTGGCTGGATTCTTCGGTGAG---------TCC------------------GGA------GCT---------------------------------ATG------GACGGC------ACCATC---------GAT---------------------------CTGTCAGCA------------------GAAATCTGG---TGGGTCATCGGAATGGCTGGATGGGGATACATCCTATACGAGCTA---------------TGG------TCC---GGAGACGTCAAGGAG---GCTTCAGAG------ACC---GGTAGCCCAAGCGTT---CAG---TAC---GCA---TTC---AAC---TCTATG---AGATTGATCGTAACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------M--DG--TI---D---------LSA------EIW-WVIGMAGWGYILYEL-----W--S-GDVKE-ASE--T-GSPSV-Q-Y-A-F-N-SM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ928348 [unk-euryarch-HF70_59C08] PRGD_OTU032_cd811d6f803c3ec2b1c7d72ad17e5e5a gb|KJ928348| PRGD_OTU032_cd811d6f803c3ec2b1c7d72ad17e5e5a, putative proteorhodopsin gene, partial cds. PRGD_OTU032_cd811d6f803c3ec2b1c7d72ad17e5e5a, putative proteorhodopsin gene, partial cds. KJ928348 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTCATAACAGTCCCTCTGCAGGTAGTAGAGTTCTACCTAATCCTAGCCGCCATCGGCGTAGGAACTTTCGTCATGTTCAGGAACCTCATGGCTGCATCCATCGTCATGCTGGTAGCTGGATTCTTCGGTGAGTCCGGAGCTATGGACAGCACCATCGATCTGTCAGCAGAAATCTGGTGGGTCATCGGAATGGCTGGATGGGGATACATCCTATACGAGCTATGGTCCGGAGACGTCAAGGAGGCTTCAGAGACCGGTAGCCCAAGCGTTCAGTACGCATTCAACTCCATGAGATTGATCGTAACTGTT LITVPLQVVEFYLILAAIGVGTFVMFRNLMAASIVMLVAGFFGESGAMDSTIDLSAEIWWVIGMAGWGYILYELWSGDVKEASETGSPSVQYAFNSMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATAACAGTCCCTCTGCAGGTAGTAGAGTTCTACCTAATCCTAGCCGCC---------ATC---GGCGTAGGAACTTTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGCTGCATCCATCGTCATGCTGGTAGCTGGATTCTTCGGTGAG---------TCC------------------GGA------GCT---------------------------------ATG------GACAGC------ACCATC---------GAT---------------------------CTGTCAGCA------------------GAAATCTGG---TGGGTCATCGGAATGGCTGGATGGGGATACATCCTATACGAGCTA---------------TGG------TCC---GGAGACGTCAAGGAG---GCTTCAGAG------ACC---GGTAGCCCAAGCGTT---CAG---TAC---GCA---TTC---AAC---TCCATG---AGATTGATCGTAACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------M--DS--TI---D---------LSA------EIW-WVIGMAGWGYILYEL-----W--S-GDVKE-ASE--T-GSPSV-Q-Y-A-F-N-SM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ928346 [unk-euryarch-HF70_59C08] PRGD_OTU032_c47720f58973f36a36aa98bed9ffdb47 gb|KJ928346| PRGD_OTU032_c47720f58973f36a36aa98bed9ffdb47, putative proteorhodopsin gene, partial cds. PRGD_OTU032_c47720f58973f36a36aa98bed9ffdb47, putative proteorhodopsin gene, partial cds. KJ928346 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTCATAACAGTCCCTCTGCAGGTAGTAGAGTTCTATCTAATCCTAGCCGCCATCGGTGTAGGAACTTTCGTCATGTTCAGAAACCTCATGGTAGCATCTCTGGTCATGCTAGTCGCTGGATTCTTCGGAGAGTCCGGAGCCATGGACAGCACCATCGATCTGTCAGCAGAAATCTGGTGGGTCATCGGAATGGCTGGATGGGGATACATCCTATACGAGCTATGGTCCGGAGACGTCAAGGAGGCTTCAGAGACTGGTAGCCCAAGCGTTCAGTACGCATTCAACGCAATGAGGATGATCGTAACTGTT LITVPLQVVEFYLILAAIGVGTFVMFRNLMVASLVMLVAGFFGESGAMDSTIDLSAEIWWVIGMAGWGYILYELWSGDVKEASETGSPSVQYAFNAMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATAACAGTCCCTCTGCAGGTAGTAGAGTTCTATCTAATCCTAGCCGCC---------ATC---GGTGTAGGAACTTTC---GTCATG------------------------------------TTCAGAAAC---CTCATGGTAGCATCTCTGGTCATGCTAGTCGCTGGATTCTTCGGAGAG---------TCC------------------GGA------GCC---------------------------------ATG------GACAGC------ACCATC---------GAT---------------------------CTGTCAGCA------------------GAAATCTGG---TGGGTCATCGGAATGGCTGGATGGGGATACATCCTATACGAGCTA---------------TGG------TCC---GGAGACGTCAAGGAG---GCTTCAGAG------ACT---GGTAGCCCAAGCGTT---CAG---TAC---GCA---TTC---AAC---GCAATG---AGGATGATCGTAACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMVASLVMLVAGFFGE---S------G--A-----------M--DS--TI---D---------LSA------EIW-WVIGMAGWGYILYEL-----W--S-GDVKE-ASE--T-GSPSV-Q-Y-A-F-N-AM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ928332 [unk-euryarch-HF70_59C08] PRGD_OTU032_3450442124cee257dbad74869b7080b3 gb|KJ928332| PRGD_OTU032_3450442124cee257dbad74869b7080b3, putative proteorhodopsin gene, partial cds. PRGD_OTU032_3450442124cee257dbad74869b7080b3, putative proteorhodopsin gene, partial cds. KJ928332 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73) CTCATAACAGTCCCTCTACAAGTAGTAGAGTTCTACCTAATCCTCGCCGCAATCGGCGTAGGAACATTCGTCATGTTCAGGAACCTCATGGTCGCGTCCATAGTCATGCTAGTAGCAGGATTCTTCGGTGAGTCCGGAGCAATGGACAGCGTCATTGATCTGTCCGCTGAGGTCTGGTGGGTCATTGGAATGGCTGGATGGATATACATCCTATACGAGCTATGGTCCGGAGATGTCAAAGCCGCATCAGAGACTGGTAGCCCGAGCGTTCAGTACGCATTCAACTCAATGAAGTACATCGTAACTTTC LITVPLQVVEFYLILAAIGVGTFVMFRNLMVASIVMLVAGFFGESGAMDSVIDLSAEVWWVIGMAGWIYILYELWSGDVKAASETGSPSVQYAFNSMKYIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATAACAGTCCCTCTACAAGTAGTAGAGTTCTACCTAATCCTCGCCGCA---------ATC---GGCGTAGGAACATTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGTCGCGTCCATAGTCATGCTAGTAGCAGGATTCTTCGGTGAG---------TCC------------------GGA------GCA---------------------------------ATG------GACAGC------GTCATT---------GAT---------------------------CTGTCCGCT------------------GAGGTCTGG---TGGGTCATTGGAATGGCTGGATGGATATACATCCTATACGAGCTA---------------TGG------TCC---GGAGATGTCAAAGCC---GCATCAGAG------ACT---GGTAGCCCGAGCGTT---CAG---TAC---GCA---TTC---AAC---TCAATG---AAGTACATCGTAACTTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMVASIVMLVAGFFGE---S------G--A-----------M--DS--VI---D---------LSA------EVW-WVIGMAGWIYILYEL-----W--S-GDVKA-ASE--T-GSPSV-Q-Y-A-F-N-SM-KYIVTF-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ928336 [unk-euryarch-HF70_59C08] PRGD_OTU032_43065551999f93b1f0fa1ec29b4a86ef gb|KJ928336| PRGD_OTU032_43065551999f93b1f0fa1ec29b4a86ef, putative proteorhodopsin gene, partial cds. PRGD_OTU032_43065551999f93b1f0fa1ec29b4a86ef, putative proteorhodopsin gene, partial cds. KJ928336 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCATAACAGTCCCTCTACAAGTAGTAGAGTTCTACCTAATCCTCGCCGCAATCGGCGTAGGAACATTCGTCATGTTCAGGAACCTCATGGTCGCGTCCATAGTCATGCTAGTAGCAGGATTCTTCGGTGAGTCCGGAGCAATGGACAGCGTCATTGATCTGTCCGCTGAGGTCTGGTGGGTCATTGGAATGGCTGGATGGATATACATCCTATACGAGCTATGGTCCGGAGATGTCAAAGCCGCATCAGAGACTGGTAGCCCGAGCGTTCAGTACGCATTCAACTCAATGAGGTTGATCGTAACTGTC LITVPLQVVEFYLILAAIGVGTFVMFRNLMVASIVMLVAGFFGESGAMDSVIDLSAEVWWVIGMAGWIYILYELWSGDVKAASETGSPSVQYAFNSMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATAACAGTCCCTCTACAAGTAGTAGAGTTCTACCTAATCCTCGCCGCA---------ATC---GGCGTAGGAACATTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGTCGCGTCCATAGTCATGCTAGTAGCAGGATTCTTCGGTGAG---------TCC------------------GGA------GCA---------------------------------ATG------GACAGC------GTCATT---------GAT---------------------------CTGTCCGCT------------------GAGGTCTGG---TGGGTCATTGGAATGGCTGGATGGATATACATCCTATACGAGCTA---------------TGG------TCC---GGAGATGTCAAAGCC---GCATCAGAG------ACT---GGTAGCCCGAGCGTT---CAG---TAC---GCA---TTC---AAC---TCAATG---AGGTTGATCGTAACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMVASIVMLVAGFFGE---S------G--A-----------M--DS--VI---D---------LSA------EVW-WVIGMAGWIYILYEL-----W--S-GDVKA-ASE--T-GSPSV-Q-Y-A-F-N-SM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ928351 [unk-euryarch-HF70_59C08] PRGD_OTU032_fd0ea91fcec4a45f7924c48a583cf233 gb|KJ928351| PRGD_OTU032_fd0ea91fcec4a45f7924c48a583cf233, putative proteorhodopsin gene, partial cds. PRGD_OTU032_fd0ea91fcec4a45f7924c48a583cf233, putative proteorhodopsin gene, partial cds. KJ928351 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTCATAACAGTCCCTCTACAAGTAGTAGAGTTCTACCTAATCCTCGCCGCAATCGGCGTAGGAACATTCGTCATGTTCAGGAACCTCATGGTCGCGTCCATAGTCATGCTAGTAGCAGGATTCTTCGGTGAGTCCGGAGCAATGGACAGCGTCATTGATCTGTCCGCTGAGGTCTGGTGGGTCATTGGAATGGCTGGATGGGGATACATCCTATACGAGCTATGGTCCGGAGATGTCAAAGCCGCATCAGAGACTGGTAGCCCGAGCGTTCAGTACGCATTCAACTCAATGAGGTTGATCGTAACTGTC LITVPLQVVEFYLILAAIGVGTFVMFRNLMVASIVMLVAGFFGESGAMDSVIDLSAEVWWVIGMAGWGYILYELWSGDVKAASETGSPSVQYAFNSMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATAACAGTCCCTCTACAAGTAGTAGAGTTCTACCTAATCCTCGCCGCA---------ATC---GGCGTAGGAACATTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGTCGCGTCCATAGTCATGCTAGTAGCAGGATTCTTCGGTGAG---------TCC------------------GGA------GCA---------------------------------ATG------GACAGC------GTCATT---------GAT---------------------------CTGTCCGCT------------------GAGGTCTGG---TGGGTCATTGGAATGGCTGGATGGGGATACATCCTATACGAGCTA---------------TGG------TCC---GGAGATGTCAAAGCC---GCATCAGAG------ACT---GGTAGCCCGAGCGTT---CAG---TAC---GCA---TTC---AAC---TCAATG---AGGTTGATCGTAACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMVASIVMLVAGFFGE---S------G--A-----------M--DS--VI---D---------LSA------EVW-WVIGMAGWGYILYEL-----W--S-GDVKA-ASE--T-GSPSV-Q-Y-A-F-N-SM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ928340 [unk-euryarch-HF70_59C08] PRGD_OTU032_798edffc7bce05ad6004f0a6343078b6 gb|KJ928340| PRGD_OTU032_798edffc7bce05ad6004f0a6343078b6, putative proteorhodopsin gene, partial cds. PRGD_OTU032_798edffc7bce05ad6004f0a6343078b6, putative proteorhodopsin gene, partial cds. KJ928340 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCATAACAGTCCCTCTACAAGTAGTAGAGTTCTACCTAATCCTCGCCGCAATCGGCGTAGGAACATTCGTCATGTTCAGGAACCTCATGGTCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGTGAGTCTGGAGCAATGGACAGCGTCATTGATCTGTCCGCTGAGGTCTGGTGGGTCATTGGAATGGCTGGATGGGGATACATCCTATACGAGCTATGGTCCGGAGATGTCAAAGCCGCATCAGAGACTGGTAGCCCGAGCGTTCAATACGCATTCAACTCAATGAGGTTGATCGTGACTGTC LITVPLQVVEFYLILAAIGVGTFVMFRNLMVASIVMLVAGFFGESGAMDSVIDLSAEVWWVIGMAGWGYILYELWSGDVKAASETGSPSVQYAFNSMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATAACAGTCCCTCTACAAGTAGTAGAGTTCTACCTAATCCTCGCCGCA---------ATC---GGCGTAGGAACATTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGTCGCATCCATAGTCATGCTAGTAGCAGGATTCTTCGGTGAG---------TCT------------------GGA------GCA---------------------------------ATG------GACAGC------GTCATT---------GAT---------------------------CTGTCCGCT------------------GAGGTCTGG---TGGGTCATTGGAATGGCTGGATGGGGATACATCCTATACGAGCTA---------------TGG------TCC---GGAGATGTCAAAGCC---GCATCAGAG------ACT---GGTAGCCCGAGCGTT---CAA---TAC---GCA---TTC---AAC---TCAATG---AGGTTGATCGTGACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMVASIVMLVAGFFGE---S------G--A-----------M--DS--VI---D---------LSA------EVW-WVIGMAGWGYILYEL-----W--S-GDVKA-ASE--T-GSPSV-Q-Y-A-F-N-SM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ928343 [unk-euryarch-HF70_59C08] PRGD_OTU032_97aca67ca591bda79a24d4fb28ee300b gb|KJ928343| PRGD_OTU032_97aca67ca591bda79a24d4fb28ee300b, putative proteorhodopsin gene, partial cds. PRGD_OTU032_97aca67ca591bda79a24d4fb28ee300b, putative proteorhodopsin gene, partial cds. KJ928343 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) CTAATCACAGTACCACTGCAAGTTGTTGAGTTCTACCTAATCCTCGCCGCTATCGGTGTGGGAACTTTCGCCATGTTCAGAAACCTCATGGGAGCATCTATCGTCATGCTAGTGGCTGGATTCTTCGGTGAGTCCGGAGCTATGGACAGTACAATCGATCTATCCGCTGAGATCTGGTGGGTCATCGGAATGGCTGGATGGGGATACATCCTATACGAGCTATGGTCCGGAGATGTCAAAGAGGCTTCAGAGACTGGTAGCCCAAGCGTTCAGTACGCATTCAACTCAATGAGGATGATTGTAACTGTA LITVPLQVVEFYLILAAIGVGTFAMFRNLMGASIVMLVAGFFGESGAMDSTIDLSAEIWWVIGMAGWGYILYELWSGDVKEASETGSPSVQYAFNSMRMIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACAGTACCACTGCAAGTTGTTGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGTGTGGGAACTTTC---GCCATG------------------------------------TTCAGAAAC---CTCATGGGAGCATCTATCGTCATGCTAGTGGCTGGATTCTTCGGTGAG---------TCC------------------GGA------GCT---------------------------------ATG------GACAGT------ACAATC---------GAT---------------------------CTATCCGCT------------------GAGATCTGG---TGGGTCATCGGAATGGCTGGATGGGGATACATCCTATACGAGCTA---------------TGG------TCC---GGAGATGTCAAAGAG---GCTTCAGAG------ACT---GGTAGCCCAAGCGTT---CAG---TAC---GCA---TTC---AAC---TCAATG---AGGATGATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLILAA---I-GVGTF-AM------------FRN-LMGASIVMLVAGFFGE---S------G--A-----------M--DS--TI---D---------LSA------EIW-WVIGMAGWGYILYEL-----W--S-GDVKE-ASE--T-GSPSV-Q-Y-A-F-N-SM-RMIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ928325 [unk-euryarch-HF70_59C08] PRGD_OTU032_00fff598538ff305d3c73532fc0af4a0 gb|KJ928325| PRGD_OTU032_00fff598538ff305d3c73532fc0af4a0, putative proteorhodopsin gene, partial cds. PRGD_OTU032_00fff598538ff305d3c73532fc0af4a0, putative proteorhodopsin gene, partial cds. KJ928325 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATCACAGTACCACTGCAAGTTGTCGAGTTCTACCTAATCCTCGCCGCTATCGGTGTGGGAACTTTCGCCATGTTCAGAAACCTCATGGGAGCATCAATCGTCATGCTAGTGGCTGGATTCTTCGGTGAGTCCGGAGCCATGGACAGTACAATCGATCTATCCGCTGAGATCTGGTGGGTCATCGGAATGGCTGGATGGGGATACATCCTATACGAGCTATGGTCCGGAGATGTCAAAGAGGCTTCAGAGACTGGTAGCCCAAGCGTTCAGTACGCATTCAACTCAATGAGGTTGATTGTAACTGTA LITVPLQVVEFYLILAAIGVGTFAMFRNLMGASIVMLVAGFFGESGAMDSTIDLSAEIWWVIGMAGWGYILYELWSGDVKEASETGSPSVQYAFNSMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACAGTACCACTGCAAGTTGTCGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGTGTGGGAACTTTC---GCCATG------------------------------------TTCAGAAAC---CTCATGGGAGCATCAATCGTCATGCTAGTGGCTGGATTCTTCGGTGAG---------TCC------------------GGA------GCC---------------------------------ATG------GACAGT------ACAATC---------GAT---------------------------CTATCCGCT------------------GAGATCTGG---TGGGTCATCGGAATGGCTGGATGGGGATACATCCTATACGAGCTA---------------TGG------TCC---GGAGATGTCAAAGAG---GCTTCAGAG------ACT---GGTAGCCCAAGCGTT---CAG---TAC---GCA---TTC---AAC---TCAATG---AGGTTGATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLILAA---I-GVGTF-AM------------FRN-LMGASIVMLVAGFFGE---S------G--A-----------M--DS--TI---D---------LSA------EIW-WVIGMAGWGYILYEL-----W--S-GDVKE-ASE--T-GSPSV-Q-Y-A-F-N-SM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ928327 [unk-euryarch-HF70_59C08] PRGD_OTU032_04e471861484da4a0016ecc51afaf6fb gb|KJ928327| PRGD_OTU032_04e471861484da4a0016ecc51afaf6fb, putative proteorhodopsin gene, partial cds. PRGD_OTU032_04e471861484da4a0016ecc51afaf6fb, putative proteorhodopsin gene, partial cds. KJ928327 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) CTGATCACAGTACCACTGCAAGTCGTTGAGTTCTACCTAATCCTCGCCGCTATCGGTGTAGGAACCTTCGCCATGTTCAGGAACCTCATGGGAGCATCCATTGTCATGCTAGTGGCTGGATTCTTCGGTGAGTCAGGAGCTATGGACAGCACTATCGATCTATCTGCTGAGATTTGGTGGGTCATCGGAATGGCTGGATGGGGATACATCCTATACGAGCTATGGTCCGGAGATGTCAAAGAGGCCTCAGAGACTGGTAGCCCAAGCGTTCAGTACGCATTCAACTCAATGAGGTTGATTGTTACTGTA LITVPLQVVEFYLILAAIGVGTFAMFRNLMGASIVMLVAGFFGESGAMDSTIDLSAEIWWVIGMAGWGYILYELWSGDVKEASETGSPSVQYAFNSMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTACCACTGCAAGTCGTTGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGTGTAGGAACCTTC---GCCATG------------------------------------TTCAGGAAC---CTCATGGGAGCATCCATTGTCATGCTAGTGGCTGGATTCTTCGGTGAG---------TCA------------------GGA------GCT---------------------------------ATG------GACAGC------ACTATC---------GAT---------------------------CTATCTGCT------------------GAGATTTGG---TGGGTCATCGGAATGGCTGGATGGGGATACATCCTATACGAGCTA---------------TGG------TCC---GGAGATGTCAAAGAG---GCCTCAGAG------ACT---GGTAGCCCAAGCGTT---CAG---TAC---GCA---TTC---AAC---TCAATG---AGGTTGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLILAA---I-GVGTF-AM------------FRN-LMGASIVMLVAGFFGE---S------G--A-----------M--DS--TI---D---------LSA------EIW-WVIGMAGWGYILYEL-----W--S-GDVKE-ASE--T-GSPSV-Q-Y-A-F-N-SM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ928345 [unk-euryarch-HF70_59C08] PRGD_OTU032_b36d8201b64d4f094d84154d08a89df4 gb|KJ928345| PRGD_OTU032_b36d8201b64d4f094d84154d08a89df4, putative proteorhodopsin gene, partial cds. PRGD_OTU032_b36d8201b64d4f094d84154d08a89df4, putative proteorhodopsin gene, partial cds. KJ928345 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) CTAATCACAGTACCACTGCAAGTCGTTGAGTTCTACCTAATCCTCGCCGCTATCGGTGTGGGAACTTTCGTCATGTTCAGGAACCTCATGGCAGCATCCATCGTCATGCTAGTTGCTGGATTCTTCGGTGAGTCCGGAGCAATGGACAGCGTCATCGACCTGTCCGCTGAGATCTGGTGGGTCATTGGAATGGCAGGATGGGGATACATCCTGTATGAGCTATGGTCCGGAGACGTCAAGGCGGCTTCAGAGACTGGAAGCCCAAGCGTTCAGTACGCATTCAACTCAATGAGGTTGATTGTAACTTTC LITVPLQVVEFYLILAAIGVGTFVMFRNLMAASIVMLVAGFFGESGAMDSVIDLSAEIWWVIGMAGWGYILYELWSGDVKAASETGSPSVQYAFNSMRLIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACAGTACCACTGCAAGTCGTTGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGTGTGGGAACTTTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGCAGCATCCATCGTCATGCTAGTTGCTGGATTCTTCGGTGAG---------TCC------------------GGA------GCA---------------------------------ATG------GACAGC------GTCATC---------GAC---------------------------CTGTCCGCT------------------GAGATCTGG---TGGGTCATTGGAATGGCAGGATGGGGATACATCCTGTATGAGCTA---------------TGG------TCC---GGAGACGTCAAGGCG---GCTTCAGAG------ACT---GGAAGCCCAAGCGTT---CAG---TAC---GCA---TTC---AAC---TCAATG---AGGTTGATTGTAACTTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMAASIVMLVAGFFGE---S------G--A-----------M--DS--VI---D---------LSA------EIW-WVIGMAGWGYILYEL-----W--S-GDVKA-ASE--T-GSPSV-Q-Y-A-F-N-SM-RLIVTF-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ928335 [unk-euryarch-HF70_59C08] PRGD_OTU032_41809d78374079c0bbc3e618e6782eed gb|KJ928335| PRGD_OTU032_41809d78374079c0bbc3e618e6782eed, putative proteorhodopsin gene, partial cds. PRGD_OTU032_41809d78374079c0bbc3e618e6782eed, putative proteorhodopsin gene, partial cds. KJ928335 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATTACAGTACCACTGCAGGTCGTTGAATTCTACCTAATCCTCGCCGCAATCGGTGTAGGAACCTTCGTCATGTTCAGGAACCTCATGGTAGCATCCATCGTCATGCTGGTAGCTGGATTCTTCGGTGAGTCCGGAGCAATGGACAGCGTCATTGACCTGTCCGCTGAGATCTGGTGGGTCATTGGAATGGCTGGATGGGGATACATCCTATACGAGCTATGGTCCGGAGATGTCAAAGCCGCATCAGAGACTGGTAGCCCAAGCGTTCAGTACGCATTCAACTCAATGAGGTTGATCGTGACTGTT LITVPLQVVEFYLILAAIGVGTFVMFRNLMVASIVMLVAGFFGESGAMDSVIDLSAEIWWVIGMAGWGYILYELWSGDVKAASETGSPSVQYAFNSMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACAGTACCACTGCAGGTCGTTGAATTCTACCTAATCCTCGCCGCA---------ATC---GGTGTAGGAACCTTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGTAGCATCCATCGTCATGCTGGTAGCTGGATTCTTCGGTGAG---------TCC------------------GGA------GCA---------------------------------ATG------GACAGC------GTCATT---------GAC---------------------------CTGTCCGCT------------------GAGATCTGG---TGGGTCATTGGAATGGCTGGATGGGGATACATCCTATACGAGCTA---------------TGG------TCC---GGAGATGTCAAAGCC---GCATCAGAG------ACT---GGTAGCCCAAGCGTT---CAG---TAC---GCA---TTC---AAC---TCAATG---AGGTTGATCGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMVASIVMLVAGFFGE---S------G--A-----------M--DS--VI---D---------LSA------EIW-WVIGMAGWGYILYEL-----W--S-GDVKA-ASE--T-GSPSV-Q-Y-A-F-N-SM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ928338 [unk-euryarch-HF70_59C08] PRGD_OTU032_4e8caee2295b615ec304c5ffedb9e512 gb|KJ928338| PRGD_OTU032_4e8caee2295b615ec304c5ffedb9e512, putative proteorhodopsin gene, partial cds. PRGD_OTU032_4e8caee2295b615ec304c5ffedb9e512, putative proteorhodopsin gene, partial cds. KJ928338 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) CTGATTACAGTACCACTGCAGGTCGTTGAATTCTACCTAATCCTTGCCGCAATCGGTGTAGGAACCTTCGTCATGTTCAGAAACCTCATGGTAGCATCCATCGTCATGCTAGTAGCTGGATTCTTCGGTGAGTCCGGAGCAATGGACAGCGTCATTGACCTGTCCGCTGAGATCTGGTGGGTCATTGGAATGGCTGGATGGGGATACATCCTATACGAGCTATGGTCCGGAGATGTCAAAGCCGCATCAGAGACTGGTAGCCCAAGCGTTCAGTACGCATTCAACTCAATGAGGTTAATCGTAACTGTC LITVPLQVVEFYLILAAIGVGTFVMFRNLMVASIVMLVAGFFGESGAMDSVIDLSAEIWWVIGMAGWGYILYELWSGDVKAASETGSPSVQYAFNSMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACAGTACCACTGCAGGTCGTTGAATTCTACCTAATCCTTGCCGCA---------ATC---GGTGTAGGAACCTTC---GTCATG------------------------------------TTCAGAAAC---CTCATGGTAGCATCCATCGTCATGCTAGTAGCTGGATTCTTCGGTGAG---------TCC------------------GGA------GCA---------------------------------ATG------GACAGC------GTCATT---------GAC---------------------------CTGTCCGCT------------------GAGATCTGG---TGGGTCATTGGAATGGCTGGATGGGGATACATCCTATACGAGCTA---------------TGG------TCC---GGAGATGTCAAAGCC---GCATCAGAG------ACT---GGTAGCCCAAGCGTT---CAG---TAC---GCA---TTC---AAC---TCAATG---AGGTTAATCGTAACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMVASIVMLVAGFFGE---S------G--A-----------M--DS--VI---D---------LSA------EIW-WVIGMAGWGYILYEL-----W--S-GDVKA-ASE--T-GSPSV-Q-Y-A-F-N-SM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ928324 [unk-euryarch-HF70_59C08] PRGD_OTU032_otuREP_8c2281b987fb26bd8aedf8d305b3f78e gb|KJ928324| PRGD_OTU032_otuREP_8c2281b987fb26bd8aedf8d305b3f78e, putative proteorhodopsin gene, partial cds. PRGD_OTU032_otuREP_8c2281b987fb26bd8aedf8d305b3f78e, putative proteorhodopsin gene, partial cds. KJ928324 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTGATTACAGTACCACTGCAGGTCGTTGAATTCTACCTGATACTCGCGGCAATCGGAGTAGGAACTTTCGTCATGTTCAGGAACCTCATGGTAGCATCTATCGTCATGCTAGTAGCTGGATTCTTCGGTGAGTCCGGAGCAATGGACAATGTCATTGATCTCTCCGCTGAGGTCTGGTGGGTCATCGGAATGGCTGGATGGGGATACATCCTATACGAGCTATGGTCCGGAGATGTCAAAGCCGCATCAGAGACTGGTAGCCCGAGCGTTCAGTACGCATTCAATTCAATGAGATTGATCGTAACTGTC LITVPLQVVEFYLILAAIGVGTFVMFRNLMVASIVMLVAGFFGESGAMDNVIDLSAEVWWVIGMAGWGYILYELWSGDVKAASETGSPSVQYAFNSMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACAGTACCACTGCAGGTCGTTGAATTCTACCTGATACTCGCGGCA---------ATC---GGAGTAGGAACTTTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGTAGCATCTATCGTCATGCTAGTAGCTGGATTCTTCGGTGAG---------TCC------------------GGA------GCA---------------------------------ATG------GACAAT------GTCATT---------GAT---------------------------CTCTCCGCT------------------GAGGTCTGG---TGGGTCATCGGAATGGCTGGATGGGGATACATCCTATACGAGCTA---------------TGG------TCC---GGAGATGTCAAAGCC---GCATCAGAG------ACT---GGTAGCCCGAGCGTT---CAG---TAC---GCA---TTC---AAT---TCAATG---AGATTGATCGTAACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMVASIVMLVAGFFGE---S------G--A-----------M--DN--VI---D---------LSA------EVW-WVIGMAGWGYILYEL-----W--S-GDVKA-ASE--T-GSPSV-Q-Y-A-F-N-SM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ928349 [unk-euryarch-HF70_59C08] PRGD_OTU032_e3a5431bb9c1bdc9b7d5d4cf686fbf57 gb|KJ928349| PRGD_OTU032_e3a5431bb9c1bdc9b7d5d4cf686fbf57, putative proteorhodopsin gene, partial cds. PRGD_OTU032_e3a5431bb9c1bdc9b7d5d4cf686fbf57, putative proteorhodopsin gene, partial cds. KJ928349 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Atlantic side (73.9992, 19.2097), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) CTGATTACAGTACCACTGCAGGTCGTTGAATTCTACCTAATCCTCGCCGCAATCGGTGTAGGAACCTTCGTCATGTTCAGGAACCTCATGGTAGCATCCATCGTCATGCTAGTAGCTGGATTCTTCGGTGAGTCCGGAGCAATGGACAGCGTCATCGACCTGTCCGCTGAGATCTGGTGGGTCATTGGAATGGCTGGATGGGGATACATCCTATACGAGCTATGGTCCGGAGATGTCAAAGCCGCATCAGAGACTGGTAGCCCAAGCGTTCAGTACGCTTTCAACTCAATGAGGTTGATCGTAACTGTC LITVPLQVVEFYLILAAIGVGTFVMFRNLMVASIVMLVAGFFGESGAMDSVIDLSAEIWWVIGMAGWGYILYELWSGDVKAASETGSPSVQYAFNSMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACAGTACCACTGCAGGTCGTTGAATTCTACCTAATCCTCGCCGCA---------ATC---GGTGTAGGAACCTTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGTAGCATCCATCGTCATGCTAGTAGCTGGATTCTTCGGTGAG---------TCC------------------GGA------GCA---------------------------------ATG------GACAGC------GTCATC---------GAC---------------------------CTGTCCGCT------------------GAGATCTGG---TGGGTCATTGGAATGGCTGGATGGGGATACATCCTATACGAGCTA---------------TGG------TCC---GGAGATGTCAAAGCC---GCATCAGAG------ACT---GGTAGCCCAAGCGTT---CAG---TAC---GCT---TTC---AAC---TCAATG---AGGTTGATCGTAACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMVASIVMLVAGFFGE---S------G--A-----------M--DS--VI---D---------LSA------EIW-WVIGMAGWGYILYEL-----W--S-GDVKA-ASE--T-GSPSV-Q-Y-A-F-N-SM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ928328 [unk-euryarch-HF70_59C08] PRGD_OTU032_0a6f0c30109229f4a57df98f92580656 gb|KJ928328| PRGD_OTU032_0a6f0c30109229f4a57df98f92580656, putative proteorhodopsin gene, partial cds. PRGD_OTU032_0a6f0c30109229f4a57df98f92580656, putative proteorhodopsin gene, partial cds. KJ928328 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) CTGATTACAGTACCACTGCAGGTCGTTGAATTCTACCTAATCCTCGCCGCAATCGGTGTAGGAACCTTCGTCATGTTCAGGAACCTCATGGTAGCATCCATCATCATGCTAGTAGCTGGATTCTTCGGCGAGTCCGGAGCAATGGACAGCGTCATCGACCTCTCCGCTGAAATCTGGTGGGTCATCGGAATGGCTGGATGGGGATACATCCTATACGAGCTATGGTCCGGAGACGTCAAAGCCGCATCAGAGACTGGTAGCCCAAGCGTTCAGTACGCTTTCAACTCAATGAGGTTGATCGTAACTGTC LITVPLQVVEFYLILAAIGVGTFVMFRNLMVASIIMLVAGFFGESGAMDSVIDLSAEIWWVIGMAGWGYILYELWSGDVKAASETGSPSVQYAFNSMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACAGTACCACTGCAGGTCGTTGAATTCTACCTAATCCTCGCCGCA---------ATC---GGTGTAGGAACCTTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGTAGCATCCATCATCATGCTAGTAGCTGGATTCTTCGGCGAG---------TCC------------------GGA------GCA---------------------------------ATG------GACAGC------GTCATC---------GAC---------------------------CTCTCCGCT------------------GAAATCTGG---TGGGTCATCGGAATGGCTGGATGGGGATACATCCTATACGAGCTA---------------TGG------TCC---GGAGACGTCAAAGCC---GCATCAGAG------ACT---GGTAGCCCAAGCGTT---CAG---TAC---GCT---TTC---AAC---TCAATG---AGGTTGATCGTAACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMVASIIMLVAGFFGE---S------G--A-----------M--DS--VI---D---------LSA------EIW-WVIGMAGWGYILYEL-----W--S-GDVKA-ASE--T-GSPSV-Q-Y-A-F-N-SM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ928344 [unk-euryarch-HF70_59C08] PRGD_OTU032_9d7c0f740d45a9476b7f96416072c260 gb|KJ928344| PRGD_OTU032_9d7c0f740d45a9476b7f96416072c260, putative proteorhodopsin gene, partial cds. PRGD_OTU032_9d7c0f740d45a9476b7f96416072c260, putative proteorhodopsin gene, partial cds. KJ928344 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATTACAGTACCACTGCAGGTCGTTGAATTCTACCTAATCCTCGCCGCAATCGGTGTAGGAACCTTCGTCATGTTCAGGAACCTCATGGTAGCATCCATCATCATGCTAGTAGCTGGATTCTTCGGCGAGTCCGGAGCAATGGACAGCGTCATCGACCTCTCCGCTGAAATCTGGTGGGTCATCGGAATGGCTGGATGGGGATACATCCTATACGAGCTATGGTCTGGAGATGTCAAAGCCGCATCAGAGACTGGTAGCCCAAGCGTTCAGTACGCATTCAACTCAATGAGGTTGATCGTAACTGTT LITVPLQVVEFYLILAAIGVGTFVMFRNLMVASIIMLVAGFFGESGAMDSVIDLSAEIWWVIGMAGWGYILYELWSGDVKAASETGSPSVQYAFNSMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACAGTACCACTGCAGGTCGTTGAATTCTACCTAATCCTCGCCGCA---------ATC---GGTGTAGGAACCTTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGTAGCATCCATCATCATGCTAGTAGCTGGATTCTTCGGCGAG---------TCC------------------GGA------GCA---------------------------------ATG------GACAGC------GTCATC---------GAC---------------------------CTCTCCGCT------------------GAAATCTGG---TGGGTCATCGGAATGGCTGGATGGGGATACATCCTATACGAGCTA---------------TGG------TCT---GGAGATGTCAAAGCC---GCATCAGAG------ACT---GGTAGCCCAAGCGTT---CAG---TAC---GCA---TTC---AAC---TCAATG---AGGTTGATCGTAACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMVASIIMLVAGFFGE---S------G--A-----------M--DS--VI---D---------LSA------EIW-WVIGMAGWGYILYEL-----W--S-GDVKA-ASE--T-GSPSV-Q-Y-A-F-N-SM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ928326 [unk-euryarch-HF70_59C08] PRGD_OTU032_019ddbdd3ef0f9c617666c085c1771c9 gb|KJ928326| PRGD_OTU032_019ddbdd3ef0f9c617666c085c1771c9, putative proteorhodopsin gene, partial cds. PRGD_OTU032_019ddbdd3ef0f9c617666c085c1771c9, putative proteorhodopsin gene, partial cds. KJ928326 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTAATTACAGTACCACTGCAAGTCGTTGAATTCTACCTAATCCTCGCTGCTATCGGTGTAGGAACTTTCGTCATGTTCAGGAACCTCATGGTAGCATCCATCATCATGCTAGTAGCTGGATTCTTCGGTGAGTCCGGAGCAATGGACAACGTCATCGACCTGTCCGCTGAGATCTGGTGGGTCATTGGAATGGCTGGATGGGGATACATCCTATACGAGCTGTGGTCAGGAGATGTCAAAGCCGCATCAGAGACTGGTAGCCCAAGCGTTCAGTACGCATTCAACTCAATGAGGTTGATCGTAACTGTC LITVPLQVVEFYLILAAIGVGTFVMFRNLMVASIIMLVAGFFGESGAMDNVIDLSAEIWWVIGMAGWGYILYELWSGDVKAASETGSPSVQYAFNSMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTACCACTGCAAGTCGTTGAATTCTACCTAATCCTCGCTGCT---------ATC---GGTGTAGGAACTTTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGTAGCATCCATCATCATGCTAGTAGCTGGATTCTTCGGTGAG---------TCC------------------GGA------GCA---------------------------------ATG------GACAAC------GTCATC---------GAC---------------------------CTGTCCGCT------------------GAGATCTGG---TGGGTCATTGGAATGGCTGGATGGGGATACATCCTATACGAGCTG---------------TGG------TCA---GGAGATGTCAAAGCC---GCATCAGAG------ACT---GGTAGCCCAAGCGTT---CAG---TAC---GCA---TTC---AAC---TCAATG---AGGTTGATCGTAACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMVASIIMLVAGFFGE---S------G--A-----------M--DN--VI---D---------LSA------EIW-WVIGMAGWGYILYEL-----W--S-GDVKA-ASE--T-GSPSV-Q-Y-A-F-N-SM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ928334 [unk-euryarch-HF70_59C08] PRGD_OTU032_3d22b66b17d7a1bda39231a33bcb3ad2 gb|KJ928334| PRGD_OTU032_3d22b66b17d7a1bda39231a33bcb3ad2, putative proteorhodopsin gene, partial cds. PRGD_OTU032_3d22b66b17d7a1bda39231a33bcb3ad2, putative proteorhodopsin gene, partial cds. KJ928334 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) CTGATTACAGTACCACTGCAAGTCGTTGAATTCTACCTAATCCTCGCCGCTATCGGTGTAGGAACCTTCGTCATGTTCAGGAACCTTATGGTAGCATCCATCATCATGCTAGTAGCTGGATTCTTCGGTGAGTCCGGAGCAATGGACAGCGTCATCGACCTGTCCGCTGAGATCTGGTGGGTCATTGGAATGGCTGGATGGGGATACATCCTATACGAGCTATGGTCAGGAGATGTCAAAGCCGCATCAGAGACTGGTAGCCCAAGCGTTCAGTACGCATTCAACTCAATGAGGTTGATCGTAACTGTC LITVPLQVVEFYLILAAIGVGTFVMFRNLMVASIIMLVAGFFGESGAMDSVIDLSAEIWWVIGMAGWGYILYELWSGDVKAASETGSPSVQYAFNSMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACAGTACCACTGCAAGTCGTTGAATTCTACCTAATCCTCGCCGCT---------ATC---GGTGTAGGAACCTTC---GTCATG------------------------------------TTCAGGAAC---CTTATGGTAGCATCCATCATCATGCTAGTAGCTGGATTCTTCGGTGAG---------TCC------------------GGA------GCA---------------------------------ATG------GACAGC------GTCATC---------GAC---------------------------CTGTCCGCT------------------GAGATCTGG---TGGGTCATTGGAATGGCTGGATGGGGATACATCCTATACGAGCTA---------------TGG------TCA---GGAGATGTCAAAGCC---GCATCAGAG------ACT---GGTAGCCCAAGCGTT---CAG---TAC---GCA---TTC---AAC---TCAATG---AGGTTGATCGTAACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMVASIIMLVAGFFGE---S------G--A-----------M--DS--VI---D---------LSA------EIW-WVIGMAGWGYILYEL-----W--S-GDVKA-ASE--T-GSPSV-Q-Y-A-F-N-SM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ928337 [unk-euryarch-HF70_59C08] PRGD_OTU032_45e13ffaf6bc275da7d8c76123d0db6c gb|KJ928337| PRGD_OTU032_45e13ffaf6bc275da7d8c76123d0db6c, putative proteorhodopsin gene, partial cds. PRGD_OTU032_45e13ffaf6bc275da7d8c76123d0db6c, putative proteorhodopsin gene, partial cds. KJ928337 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTGATTACAGTACCACTGCAGGTCGTTGAATTCTACCTAATCCTCGCCGCTATCGGTGTAGGAACCTTCGTCATGTTCAGGAACCTCATGGTAGCATCCATCATCATGCTAGTGGCTGGATTCTTCGGTGAGTCCGGAGCAATGGACAGCGTCATCGACCTGTCCGCTGAGATCTGGTGGGTCATTGGAATGGCTGGATGGGGATACATCCTATACGAGCTATGGTCCGGAGATGTCAAAGCCGCTTCAGAGACTGGTAGCCCAAGCGTTCAGTACGCATTCAACTCAATGAGGTTGATCGTAACTGTA LITVPLQVVEFYLILAAIGVGTFVMFRNLMVASIIMLVAGFFGESGAMDSVIDLSAEIWWVIGMAGWGYILYELWSGDVKAASETGSPSVQYAFNSMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACAGTACCACTGCAGGTCGTTGAATTCTACCTAATCCTCGCCGCT---------ATC---GGTGTAGGAACCTTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGTAGCATCCATCATCATGCTAGTGGCTGGATTCTTCGGTGAG---------TCC------------------GGA------GCA---------------------------------ATG------GACAGC------GTCATC---------GAC---------------------------CTGTCCGCT------------------GAGATCTGG---TGGGTCATTGGAATGGCTGGATGGGGATACATCCTATACGAGCTA---------------TGG------TCC---GGAGATGTCAAAGCC---GCTTCAGAG------ACT---GGTAGCCCAAGCGTT---CAG---TAC---GCA---TTC---AAC---TCAATG---AGGTTGATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMVASIIMLVAGFFGE---S------G--A-----------M--DS--VI---D---------LSA------EIW-WVIGMAGWGYILYEL-----W--S-GDVKA-ASE--T-GSPSV-Q-Y-A-F-N-SM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ928333 [unk-euryarch-HF70_59C08] PRGD_OTU032_37067f325226ce320b3950c8ad34da01 gb|KJ928333| PRGD_OTU032_37067f325226ce320b3950c8ad34da01, putative proteorhodopsin gene, partial cds. PRGD_OTU032_37067f325226ce320b3950c8ad34da01, putative proteorhodopsin gene, partial cds. KJ928333 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) CTGATTACAGTACCACTGCAAGTCGTTGAATTCTACCTAATCCTCGCCGCTATTGGTGTAGGAACCTTCGTCATGTTCAGGAACCTCATGGTAGCATCCATCGTCATGCTAGTGGCTGGATTCTTCGGTGAGTCCGGAGCAATGGACAGCGTCATCGACCTATCCGCTGAGATCTGGTGGGTCATCGGAATGGCTGGATGGGGTTACATCCTATACGAGCTATGGTCCGGAGATGTCAAAGCCGCATCAGAGACTGGTAGCCCAAGTGTTCAGTACGCATTCAACTCAATGAGGTTGATTGTAACTGTC LITVPLQVVEFYLILAAIGVGTFVMFRNLMVASIVMLVAGFFGESGAMDSVIDLSAEIWWVIGMAGWGYILYELWSGDVKAASETGSPSVQYAFNSMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACAGTACCACTGCAAGTCGTTGAATTCTACCTAATCCTCGCCGCT---------ATT---GGTGTAGGAACCTTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGTAGCATCCATCGTCATGCTAGTGGCTGGATTCTTCGGTGAG---------TCC------------------GGA------GCA---------------------------------ATG------GACAGC------GTCATC---------GAC---------------------------CTATCCGCT------------------GAGATCTGG---TGGGTCATCGGAATGGCTGGATGGGGTTACATCCTATACGAGCTA---------------TGG------TCC---GGAGATGTCAAAGCC---GCATCAGAG------ACT---GGTAGCCCAAGTGTT---CAG---TAC---GCA---TTC---AAC---TCAATG---AGGTTGATTGTAACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLILAA---I-GVGTF-VM------------FRN-LMVASIVMLVAGFFGE---S------G--A-----------M--DS--VI---D---------LSA------EIW-WVIGMAGWGYILYEL-----W--S-GDVKA-ASE--T-GSPSV-Q-Y-A-F-N-SM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ928339 [unk-euryarch-HF70_59C08] PRGD_OTU032_643be797bb870033085406209dab4d40 gb|KJ928339| PRGD_OTU032_643be797bb870033085406209dab4d40, putative proteorhodopsin gene, partial cds. PRGD_OTU032_643be797bb870033085406209dab4d40, putative proteorhodopsin gene, partial cds. KJ928339 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACAGTCCCACTGCAGGTCATCGAGTTCTACCTAATCCTCGCCGCTATCGGTGTGGGAACATTCGTCATGTTCAGGAACCTCATGGCAGCATCTCTCGTCATGCTCGTAGCTGGATTCTTCGGAGAGTCCGGAGCAATGGACGGCGTCATCGACCTGTCCGCTGAGATCTGGTGGGTCATCGGAGTGGCAGGATGGGGATACATCCTGTACGAGCTATGGCAGGGAGACGTCAAAGACGCCGCTGCAACTGGTAGTGAAAGCGTGCAGTTCGCTTTCAACTCCATGAAAATCATTGTGACCTTT LITVPLQVIEFYLILAAIGVGTFVMFRNLMAASLVMLVAGFFGESGAMDGVIDLSAEIWWVIGVAGWGYILYELWQGDVKDAAATGSESVQFAFNSMKIIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTCCCACTGCAGGTCATCGAGTTCTACCTAATCCTCGCCGCT---------ATC---GGTGTGGGAACATTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGCAGCATCTCTCGTCATGCTCGTAGCTGGATTCTTCGGAGAG---------TCC------------------GGA------GCA---------------------------------ATG------GACGGC------GTCATC---------GAC---------------------------CTGTCCGCT------------------GAGATCTGG---TGGGTCATCGGAGTGGCAGGATGGGGATACATCCTGTACGAGCTA---------------TGG------CAG---GGAGACGTCAAAGAC---GCCGCTGCA------ACT---GGTAGTGAAAGCGTG---CAG---TTC---GCT---TTC---AAC---TCCATG---AAAATCATTGTGACCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVIEFYLILAA---I-GVGTF-VM------------FRN-LMAASLVMLVAGFFGE---S------G--A-----------M--DG--VI---D---------LSA------EIW-WVIGVAGWGYILYEL-----W--Q-GDVKD-AAA--T-GSESV-Q-F-A-F-N-SM-KIIVTF-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ928350 [unk-euryarch-HF70_59C08] PRGD_OTU032_e580c771965c6def236ecac510234409 gb|KJ928350| PRGD_OTU032_e580c771965c6def236ecac510234409, putative proteorhodopsin gene, partial cds. PRGD_OTU032_e580c771965c6def236ecac510234409, putative proteorhodopsin gene, partial cds. KJ928350 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (73.9992, 19.2097), Indian Ocean (-14.48, 113.45) TTGATCACAGTCCCACTGCAGGTCATCGAGTTCTACCTAATCCTAGCCGCTATCGGTGTGGGAACTTTCGTCATGTTCAGGAACCTCATGGCAGCATCTCTCGTCATGCTCGTAGCTGGATTCTTCGGAGAGTCCGGAGCAATGGACGGCGTCATCGACCTGTCCGCTGAGATCTGGTGGGTCATCGGAATGGCAGGATGGGGATACATCCTGTACGAGCTATGGCAGGGAGACGTCAAAGACGCCGCTGCAACTGGTAGTGAAAGCGTGCAGTTCGCTTTCAACTCCATGAAAATCATTGTGACCTTT LITVPLQVIEFYLILAAIGVGTFVMFRNLMAASLVMLVAGFFGESGAMDGVIDLSAEIWWVIGMAGWGYILYELWQGDVKDAAATGSESVQFAFNSMKIIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTCCCACTGCAGGTCATCGAGTTCTACCTAATCCTAGCCGCT---------ATC---GGTGTGGGAACTTTC---GTCATG------------------------------------TTCAGGAAC---CTCATGGCAGCATCTCTCGTCATGCTCGTAGCTGGATTCTTCGGAGAG---------TCC------------------GGA------GCA---------------------------------ATG------GACGGC------GTCATC---------GAC---------------------------CTGTCCGCT------------------GAGATCTGG---TGGGTCATCGGAATGGCAGGATGGGGATACATCCTGTACGAGCTA---------------TGG------CAG---GGAGACGTCAAAGAC---GCCGCTGCA------ACT---GGTAGTGAAAGCGTG---CAG---TTC---GCT---TTC---AAC---TCCATG---AAAATCATTGTGACCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVIEFYLILAA---I-GVGTF-VM------------FRN-LMAASLVMLVAGFFGE---S------G--A-----------M--DG--VI---D---------LSA------EIW-WVIGMAGWGYILYEL-----W--Q-GDVKD-AAA--T-GSESV-Q-F-A-F-N-SM-KIIVTF-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ929851 [unk-euryarch-HF70_59C08] PRGD_OTU302_otuREP_2e68981308bbb1b00bc5634bc38657ea gb|KJ929851| PRGD_OTU302_otuREP_2e68981308bbb1b00bc5634bc38657ea, putative proteorhodopsin gene, partial cds. PRGD_OTU302_otuREP_2e68981308bbb1b00bc5634bc38657ea, putative proteorhodopsin gene, partial cds. KJ929851 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGCTCACAGTCCCACTACAGATTGCTGAGTTCTACCTCATCCTCGCTGCGATTGGTGTCGCTAGTGTCGTGATGTTCCGCAATCTGATGATTGCATCAATTGTGATGCTTGTTGCCGGATTCTTCGGTGAAACCGGTGCATGGGAAATCTTCGGAGACGCGAGCACAGAGATTTGGTGGGCCATTGGAATGGCTGGATGGATTTACATCATCTACGAGATTTTCAAGGGTTCAATCAACGATGCCGCTCAACAGGCCAGTGAAAGTGTCCAGTTCGCATTCAACTCAATGCGCTGGATTGTTTTGGTA LLTVPLQIAEFYLILAAIGVASVVMFRNLMIASIVMLVAGFFGETGAWEIFGDASTEIWWAIGMAGWIYIIYEIFKGSINDAAQQASESVQFAFNSMRWIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTCACAGTCCCACTACAGATTGCTGAGTTCTACCTCATCCTCGCTGCG---------ATT---GGTGTCGCTAGTGTC---GTGATG------------------------------------TTCCGCAAT---CTGATGATTGCATCAATTGTGATGCTTGTTGCCGGATTCTTCGGTGAA---------ACC------------------GGT------GCA---------------------------------TGG------GAAATC------TTCGGA---------GAC---------------------------GCGAGCACA------------------GAGATTTGG---TGGGCCATTGGAATGGCTGGATGGATTTACATCATCTACGAGATT---------------TTC------AAG---GGTTCAATCAACGAT---GCCGCTCAA------CAG---GCCAGTGAAAGTGTC---CAG---TTC---GCA---TTC---AAC---TCAATG---CGCTGGATTGTTTTGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIAEFYLILAA---I-GVASV-VM------------FRN-LMIASIVMLVAGFFGE---T------G--A-----------W--EI--FG---D---------AST------EIW-WAIGMAGWIYIIYEI-----F--K-GSIND-AAQ--Q-ASESV-Q-F-A-F-N-SM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ929725 [unk-euryarch-HF70_59C08] PRGD_OTU214_b356b37736a7db4df6bef0999d4ff73a gb|KJ929725| PRGD_OTU214_b356b37736a7db4df6bef0999d4ff73a, putative proteorhodopsin gene, partial cds. PRGD_OTU214_b356b37736a7db4df6bef0999d4ff73a, putative proteorhodopsin gene, partial cds. KJ929725 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATCACTGTCCCACTACAGGTTGTAGAATTTTATCTAATTCTAGCTGCAATCGGAGTAGGTACTGCAATCATGTTCCAAAGACTACTAGGAGCATCTATTGTAATGCTAGTTGCAGGATACTTCGGTGAATCCGGAGCATGGGATGTATTCGGTGATTCAAGCACTGAGATTTGGTTCGTAATCGGAATGGCCGGATGGGCATGGATTCTCTACGAACTACATGGTGGAGAAGTCGGTGCTGCTGCTGAAAGCGGAAGCGCAGGAGTCCAATATGGATTCAATGCCATGAAGTGGATTGTAACAGTA LITVPLQVVEFYLILAAIGVGTAIMFQRLLGASIVMLVAGYFGESGAWDVFGDSSTEIWFVIGMAGWAWILYELHGGEVGAAAESGSAGVQYGFNAMKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTCCCACTACAGGTTGTAGAATTTTATCTAATTCTAGCTGCA---------ATC---GGAGTAGGTACTGCA---ATCATG------------------------------------TTCCAAAGA---CTACTAGGAGCATCTATTGTAATGCTAGTTGCAGGATACTTCGGTGAA---------TCC------------------GGA------GCA---------------------------------TGG------GATGTA------TTCGGT---------GAT---------------------------TCAAGCACT------------------GAGATTTGG---TTCGTAATCGGAATGGCCGGATGGGCATGGATTCTCTACGAACTA---------------CAT------GGT---GGAGAAGTCGGTGCT---GCTGCTGAA------AGC---GGAAGCGCAGGAGTC---CAA---TAT---GGA---TTC---AAT---GCCATG---AAGTGGATTGTAACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLILAA---I-GVGTA-IM------------FQR-LLGASIVMLVAGYFGE---S------G--A-----------W--DV--FG---D---------SST------EIW-FVIGMAGWAWILYEL-----H--G-GEVGA-AAE--S-GSAGV-Q-Y-G-F-N-AM-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ929724 [unk-euryarch-HF70_59C08] PRGD_OTU214_otuREP_efeb838ea66b45502af57531b4bd8fe6 gb|KJ929724| PRGD_OTU214_otuREP_efeb838ea66b45502af57531b4bd8fe6, putative proteorhodopsin gene, partial cds. PRGD_OTU214_otuREP_efeb838ea66b45502af57531b4bd8fe6, putative proteorhodopsin gene, partial cds. KJ929724 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTAATCACAGTACCACTACAAGTCGTAGAATTCTACCTAATTCTAGCTGCAATCGGAGTAGGTACTGCACTCATGTTCCAGAGACTACTTGGAGCATCTATTGTAATGCTGGTTGCCGGATACTTCGGTGAATCCGGAGCTATGGACGGTACTCTAGACCTTTCAGCTGAAGTCTGGTGGGGAATTGGAATGCTCGGATGGGCATGGATTCTCTACGAACTACATCAAGGAGAAGTCGGTGAAGCTGCAAAGAGCGGAAGCCCAGGTGTCCAATATGGATTCAATGCAATGAAGTGGATTGTAACAGTA LITVPLQVVEFYLILAAIGVGTALMFQRLLGASIVMLVAGYFGESGAMDGTLDLSAEVWWGIGMLGWAWILYELHQGEVGEAAKSGSPGVQYGFNAMKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTACCACTACAAGTCGTAGAATTCTACCTAATTCTAGCTGCA---------ATC---GGAGTAGGTACTGCA---CTCATG------------------------------------TTCCAGAGA---CTACTTGGAGCATCTATTGTAATGCTGGTTGCCGGATACTTCGGTGAA---------TCC------------------GGA------GCT---------------------------------ATG------GACGGT------ACTCTA---------GAC---------------------------CTTTCAGCT------------------GAAGTCTGG---TGGGGAATTGGAATGCTCGGATGGGCATGGATTCTCTACGAACTA---------------CAT------CAA---GGAGAAGTCGGTGAA---GCTGCAAAG------AGC---GGAAGCCCAGGTGTC---CAA---TAT---GGA---TTC---AAT---GCAATG---AAGTGGATTGTAACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLILAA---I-GVGTA-LM------------FQR-LLGASIVMLVAGYFGE---S------G--A-----------M--DG--TL---D---------LSA------EVW-WGIGMLGWAWILYEL-----H--Q-GEVGE-AAK--S-GSPGV-Q-Y-G-F-N-AM-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ929156 [unk-euryarch-HF70_59C08] PRGD_OTU082_otuREP_8ae9db7c2423a0300d671b0a24dcae97 gb|KJ929156| PRGD_OTU082_otuREP_8ae9db7c2423a0300d671b0a24dcae97, putative proteorhodopsin gene, partial cds. PRGD_OTU082_otuREP_8ae9db7c2423a0300d671b0a24dcae97, putative proteorhodopsin gene, partial cds. KJ929156 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTTATCACAGTTCCACTACAAGTAGTTGAATTCTACTTGATTCTAGCAGCAATCGGTGTAGCATCCGCTATGCTATTCTGGAGATTACTAGGTGCATCAATTATCATGTTGGCTTTCGGATTCTTTGGTGAATCTGGAGCTATGGATGTTTGGATTGCATGGATCATTGGAATGGTGGCATGGATTTACATCATATATGAAATATGGATGGGAGATGCCAAGAAAGCAGCTGGTGAAGCAAGTGAAGGTGTTCAGTTCGCATTCACTTGGATGACCTACATTCTTACATTC LITVPLQVVEFYLILAAIGVASAMLFWRLLGASIIMLAFGFFGESGAMDVWIAWIIGMVAWIYIIYEIWMGDAKKAAGEASEGVQFAFTWMTYILTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATCACAGTTCCACTACAAGTAGTTGAATTCTACTTGATTCTAGCAGCA---------ATC---GGTGTAGCATCCGCT---ATGCTA------------------------------------TTCTGGAGA---TTACTAGGTGCATCAATTATCATGTTGGCTTTCGGATTCTTTGGTGAA---------TCT------------------GGA------------------------------------------------------------------------------GCT---------------------------ATGGATGTT------------------TGGATTGCA---TGGATCATTGGAATGGTGGCATGGATTTACATCATATATGAAATA---------------TGG------ATG---GGAGATGCCAAGAAA---GCAGCTGGT------GAA---GCAAGTGAAGGTGTT---CAG---TTC---GCA---TTC---ACT---TGGATG---ACCTACATTCTTACATTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLILAA---I-GVASA-ML------------FWR-LLGASIIMLAFGFFGE---S------G--------------------------A---------MDV------WIA-WIIGMVAWIYIIYEI-----W--M-GDAKK-AAG--E-ASEGV-Q-F-A-F-T-WM-TYILTF-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ929161 [unk-euryarch-HF70_59C08] PRGD_OTU082_af27424328614de7e33fac3a65186639 gb|KJ929161| PRGD_OTU082_af27424328614de7e33fac3a65186639, putative proteorhodopsin gene, partial cds. PRGD_OTU082_af27424328614de7e33fac3a65186639, putative proteorhodopsin gene, partial cds. KJ929161 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTTATCACAGTTCCACTACAAGTAGTTGAATTCTACTTGATTCTGGCAGCAATCGGTGTAGCATCAGCTATGCTATTCTGGAGATTACTAGGTGCATCAATTATCATGTTGGCTTTCGGATTCTTTGGTGAATCTGGAGCTATGGATGCTTGGATTGCTTGGGTCATTGGAATGGTTGCATGGATCTACATCATATACGAAATATGGATGGGAGATGCCAAGAAAGCAGCTGGTGAAGCAAGTGAAGGTGTTCAGTTCGCATTCACTTGGATGACCTACATTCTTACATTC LITVPLQVVEFYLILAAIGVASAMLFWRLLGASIIMLAFGFFGESGAMDAWIAWVIGMVAWIYIIYEIWMGDAKKAAGEASEGVQFAFTWMTYILTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATCACAGTTCCACTACAAGTAGTTGAATTCTACTTGATTCTGGCAGCA---------ATC---GGTGTAGCATCAGCT---ATGCTA------------------------------------TTCTGGAGA---TTACTAGGTGCATCAATTATCATGTTGGCTTTCGGATTCTTTGGTGAA---------TCT------------------GGA------------------------------------------GCTATG---GATGCT------------------------------------------------------------------------------TGGATTGCT---TGGGTCATTGGAATGGTTGCATGGATCTACATCATATACGAAATA---------------TGG------ATG---GGAGATGCCAAGAAA---GCAGCTGGT------GAA---GCAAGTGAAGGTGTT---CAG---TTC---GCA---TTC---ACT---TGGATG---ACCTACATTCTTACATTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLILAA---I-GVASA-ML------------FWR-LLGASIIMLAFGFFGE---S------G--------------AM-DA--------------------------WIA-WVIGMVAWIYIIYEI-----W--M-GDAKK-AAG--E-ASEGV-Q-F-A-F-T-WM-TYILTF-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ929163 [unk-euryarch-HF70_59C08] PRGD_OTU082_e7bc86c15df070dfae4e7a664979058c gb|KJ929163| PRGD_OTU082_e7bc86c15df070dfae4e7a664979058c, putative proteorhodopsin gene, partial cds. PRGD_OTU082_e7bc86c15df070dfae4e7a664979058c, putative proteorhodopsin gene, partial cds. KJ929163 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTTATCACAGTTCCACTACAAGTAGTTGAGTTCTACTTGATTCTAGCAGCAATCGGTGTAGCATCCGCTATGCTATTCTGGAGATTACTAGGTGCATCAATTATCATGTTGGCTTTCGGATTCTTCGGTGAATCTGGAGCTATGGATGCTTGGATTGCTTGGGCTATTGGAATGGCAGCATGGATCTACATCATATACGAAATATGGTTCGGAGATGCCAAGAAAGCAGCAGGCGAAGCAACTGAAGGCGTTCAGTTTGCATTCACATGGATGACCTACATTCTTACATTC LITVPLQVVEFYLILAAIGVASAMLFWRLLGASIIMLAFGFFGESGAMDAWIAWAIGMAAWIYIIYEIWFGDAKKAAGEATEGVQFAFTWMTYILTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATCACAGTTCCACTACAAGTAGTTGAGTTCTACTTGATTCTAGCAGCA---------ATC---GGTGTAGCATCCGCT---ATGCTA------------------------------------TTCTGGAGA---TTACTAGGTGCATCAATTATCATGTTGGCTTTCGGATTCTTCGGTGAA---------TCT------------------GGA------------------------------------------GCTATG---GATGCT------------------------------------------------------------------------------TGGATTGCT---TGGGCTATTGGAATGGCAGCATGGATCTACATCATATACGAAATA---------------TGG------TTC---GGAGATGCCAAGAAA---GCAGCAGGC------GAA---GCAACTGAAGGCGTT---CAG---TTT---GCA---TTC---ACA---TGGATG---ACCTACATTCTTACATTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLILAA---I-GVASA-ML------------FWR-LLGASIIMLAFGFFGE---S------G--------------AM-DA--------------------------WIA-WAIGMAAWIYIIYEI-----W--F-GDAKK-AAG--E-ATEGV-Q-F-A-F-T-WM-TYILTF-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ929164 [unk-euryarch-HF70_59C08] PRGD_OTU082_f3cca0674e3426031053f918a31f5dba gb|KJ929164| PRGD_OTU082_f3cca0674e3426031053f918a31f5dba, putative proteorhodopsin gene, partial cds. PRGD_OTU082_f3cca0674e3426031053f918a31f5dba, putative proteorhodopsin gene, partial cds. KJ929164 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTTATCACAGTTCCACTACAAGTAGTTGAATTCTACTTGATTCTAGCAGCAATCGGTGTAGCATCCGCTATGCTATTCTGGAGATTACTAGGTGCATCAATTATCATGTTGGCTTTCGGATTCTTTGGTGAGTCTGGAGCTATGGATGCTTGGATTGCTTGGGCCATTGGAATGGCAGCATGGATCTATATCATATACGAAATATGGTTTGGAGATGCTAAGAAAGCAGCCGGTGAAGCAAGCGAAGGCGTTCAGTTTGCATTCACTTGGATGACCTACATTCTTACATTC LITVPLQVVEFYLILAAIGVASAMLFWRLLGASIIMLAFGFFGESGAMDAWIAWAIGMAAWIYIIYEIWFGDAKKAAGEASEGVQFAFTWMTYILTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATCACAGTTCCACTACAAGTAGTTGAATTCTACTTGATTCTAGCAGCA---------ATC---GGTGTAGCATCCGCT---ATGCTA------------------------------------TTCTGGAGA---TTACTAGGTGCATCAATTATCATGTTGGCTTTCGGATTCTTTGGTGAG---------TCT------------------GGA------------------------------------------GCTATG---GATGCT------------------------------------------------------------------------------TGGATTGCT---TGGGCCATTGGAATGGCAGCATGGATCTATATCATATACGAAATA---------------TGG------TTT---GGAGATGCTAAGAAA---GCAGCCGGT------GAA---GCAAGCGAAGGCGTT---CAG---TTT---GCA---TTC---ACT---TGGATG---ACCTACATTCTTACATTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLILAA---I-GVASA-ML------------FWR-LLGASIIMLAFGFFGE---S------G--------------AM-DA--------------------------WIA-WAIGMAAWIYIIYEI-----W--F-GDAKK-AAG--E-ASEGV-Q-F-A-F-T-WM-TYILTF-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ929159 [unk-euryarch-HF70_59C08] PRGD_OTU082_8fc8431dcd4f6f99937b033b181cfb3e gb|KJ929159| PRGD_OTU082_8fc8431dcd4f6f99937b033b181cfb3e, putative proteorhodopsin gene, partial cds. PRGD_OTU082_8fc8431dcd4f6f99937b033b181cfb3e, putative proteorhodopsin gene, partial cds. KJ929159 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) CTTATCACAGTCCCACTACAAGTAGTTGAATTCTACTTGATCCTAGCTGCAATAGGCGTAGCATCTGCTATGCTCTTCTGGAGATTACTAGGTGCATCGATCGTCATGTTGGCTTTTGGTTTCTTTGGAGAATCCGGAGCTATGGATGCTACAATTGCATGGGCAATCGGAATGGCAGCCTGGATTTACATCATATACGAAATATGGTATGGAGATGCTAAGAAAGCAGCAGGCGATGCAAGTGAAGGTGTACAATTCGCTTTCACATGGATGACTTACATTCTAACCTTC LITVPLQVVEFYLILAAIGVASAMLFWRLLGASIVMLAFGFFGESGAMDATIAWAIGMAAWIYIIYEIWYGDAKKAAGDASEGVQFAFTWMTYILTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATCACAGTCCCACTACAAGTAGTTGAATTCTACTTGATCCTAGCTGCA---------ATA---GGCGTAGCATCTGCT---ATGCTC------------------------------------TTCTGGAGA---TTACTAGGTGCATCGATCGTCATGTTGGCTTTTGGTTTCTTTGGAGAA---------TCC------------------GGA------------------------------------------------------GCT------ATGGAT---------GCT---------------------------ACAATTGCA------------------TGG------------GCAATCGGAATGGCAGCCTGGATTTACATCATATACGAAATA---------------TGG------TAT---GGAGATGCTAAGAAA---GCAGCAGGC------GAT---GCAAGTGAAGGTGTA---CAA---TTC---GCT---TTC---ACA---TGGATG---ACTTACATTCTAACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLILAA---I-GVASA-ML------------FWR-LLGASIVMLAFGFFGE---S------G------------------A--MD---A---------TIA------W----AIGMAAWIYIIYEI-----W--Y-GDAKK-AAG--D-ASEGV-Q-F-A-F-T-WM-TYILTF-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ929160 [unk-euryarch-HF70_59C08] PRGD_OTU082_ae72f24fe18fc614f8ad2237d164d10d gb|KJ929160| PRGD_OTU082_ae72f24fe18fc614f8ad2237d164d10d, putative proteorhodopsin gene, partial cds. PRGD_OTU082_ae72f24fe18fc614f8ad2237d164d10d, putative proteorhodopsin gene, partial cds. KJ929160 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -33.28, 45.35) CTTATCACAGTCCCACTACAAGTAGTTGAATTCTACTTGATCCTAGCTGCAATAGGCGTAGCATCTGCTATGCTCTTTTGGAGATTACTAGGTGCATCTATCGTCATGTTGGCTTTTGGTTTCTTTGGAGAATCCGGAGCTATGGATGCTACAATAGCATGGGTAATCGGAGTGGTAGCCTGGCTCTACATCATTTACGAAATATGGATGGGAGATGCTAAGAAAGCAGCAAACGAAGCAAGTGAAGGTGTACAATTCGCTTTCACATGGATGACTTACATTCTAACCTTC LITVPLQVVEFYLILAAIGVASAMLFWRLLGASIVMLAFGFFGESGAMDATIAWVIGVVAWLYIIYEIWMGDAKKAANEASEGVQFAFTWMTYILTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATCACAGTCCCACTACAAGTAGTTGAATTCTACTTGATCCTAGCTGCA---------ATA---GGCGTAGCATCTGCT---ATGCTC------------------------------------TTTTGGAGA---TTACTAGGTGCATCTATCGTCATGTTGGCTTTTGGTTTCTTTGGAGAA---------TCC------------------GGA------------------------------------------------------GCT------ATGGAT---------GCT---------------------------ACAATAGCA------------------TGG------------GTAATCGGAGTGGTAGCCTGGCTCTACATCATTTACGAAATA---------------TGG------ATG---GGAGATGCTAAGAAA---GCAGCAAAC------GAA---GCAAGTGAAGGTGTA---CAA---TTC---GCT---TTC---ACA---TGGATG---ACTTACATTCTAACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLILAA---I-GVASA-ML------------FWR-LLGASIVMLAFGFFGE---S------G------------------A--MD---A---------TIA------W----VIGVVAWLYIIYEI-----W--M-GDAKK-AAN--E-ASEGV-Q-F-A-F-T-WM-TYILTF-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ929157 [unk-euryarch-HF70_59C08] PRGD_OTU082_0817acaba61967748d7893e69432b9be gb|KJ929157| PRGD_OTU082_0817acaba61967748d7893e69432b9be, putative proteorhodopsin gene, partial cds. PRGD_OTU082_0817acaba61967748d7893e69432b9be, putative proteorhodopsin gene, partial cds. KJ929157 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATCACTGTACCTCTACAAGTTGTTGAATTTTATCTAATTTTAGCTGCTATTGGTGTTGCCTCAGCAATGCTCTTCTGGAGACTGCTAGGTGCATCCATTGTAATGCTAGCTTTCGGATTCTTCGGGGAATCTGGAGCCATGGATGTCTGGATTGCATGGATCATCGGAATGGCTGCATGGATTTACATCATATATGAAATATGGATGGGAGATGCCAAGAAAGCAGCTGGCGAAGCAAGTGAAGGTGTCCAGTTTGCATTCACATGGATGACCTACATTCTAACATTC LITVPLQVVEFYLILAAIGVASAMLFWRLLGASIVMLAFGFFGESGAMDVWIAWIIGMAAWIYIIYEIWMGDAKKAAGEASEGVQFAFTWMTYILTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCTCTACAAGTTGTTGAATTTTATCTAATTTTAGCTGCT---------ATT---GGTGTTGCCTCAGCA---ATGCTC------------------------------------TTCTGGAGA---CTGCTAGGTGCATCCATTGTAATGCTAGCTTTCGGATTCTTCGGGGAA---------TCT------------------GGA------------------------------------------------------------------------------GCC---------------------------ATGGATGTC------------------TGGATTGCA---TGGATCATCGGAATGGCTGCATGGATTTACATCATATATGAAATA---------------TGG------ATG---GGAGATGCCAAGAAA---GCAGCTGGC------GAA---GCAAGTGAAGGTGTC---CAG---TTT---GCA---TTC---ACA---TGGATG---ACCTACATTCTAACATTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLILAA---I-GVASA-ML------------FWR-LLGASIVMLAFGFFGE---S------G--------------------------A---------MDV------WIA-WIIGMAAWIYIIYEI-----W--M-GDAKK-AAG--E-ASEGV-Q-F-A-F-T-WM-TYILTF-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ929162 [unk-euryarch-HF70_59C08] PRGD_OTU082_d62a4a43b33c097ab28a397d56e5c6d3 gb|KJ929162| PRGD_OTU082_d62a4a43b33c097ab28a397d56e5c6d3, putative proteorhodopsin gene, partial cds. PRGD_OTU082_d62a4a43b33c097ab28a397d56e5c6d3, putative proteorhodopsin gene, partial cds. KJ929162 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTAATCACTGTACCTCTACAAGTTGTTGAATTTTATCTAATTTTAGCAGCAATCGGTGTTGCTTCAGCAATGCTCTTCTGGAGATTGCTAGGTGCATCTATTGTAATGCTAGCTTTCGGATTCTTCGGGGAATCTGGAGCCATGGATGTCTGGATTGCATGGATCATCGGAATGGCTGCATGGATTTACATCATATATGAGATATGGATGGGAGATGCCAAGAAAGCAGCTAGCGAAGCAAGTGAAGGTGTCCAGTTTGCATTCACATGGATGACCTACATTCTAACATTC LITVPLQVVEFYLILAAIGVASAMLFWRLLGASIVMLAFGFFGESGAMDVWIAWIIGMAAWIYIIYEIWMGDAKKAASEASEGVQFAFTWMTYILTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACTGTACCTCTACAAGTTGTTGAATTTTATCTAATTTTAGCAGCA---------ATC---GGTGTTGCTTCAGCA---ATGCTC------------------------------------TTCTGGAGA---TTGCTAGGTGCATCTATTGTAATGCTAGCTTTCGGATTCTTCGGGGAA---------TCT------------------GGA------------------------------------------------------------------------------GCC---------------------------ATGGATGTC------------------TGGATTGCA---TGGATCATCGGAATGGCTGCATGGATTTACATCATATATGAGATA---------------TGG------ATG---GGAGATGCCAAGAAA---GCAGCTAGC------GAA---GCAAGTGAAGGTGTC---CAG---TTT---GCA---TTC---ACA---TGGATG---ACCTACATTCTAACATTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLILAA---I-GVASA-ML------------FWR-LLGASIVMLAFGFFGE---S------G--------------------------A---------MDV------WIA-WIIGMAAWIYIIYEI-----W--M-GDAKK-AAS--E-ASEGV-Q-F-A-F-T-WM-TYILTF-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ929158 [unk-euryarch-HF70_59C08] PRGD_OTU082_49029d8077bf13f642600a620b60297f gb|KJ929158| PRGD_OTU082_49029d8077bf13f642600a620b60297f, putative proteorhodopsin gene, partial cds. PRGD_OTU082_49029d8077bf13f642600a620b60297f, putative proteorhodopsin gene, partial cds. KJ929158 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTAATCACTGTACCTCTACAAGTTGTTGAATTTTATCTAATTTTGGCAGCAATTGGTGTTGCATCAGCAATGCTCTTCTGGAGATTGCTAGGTGCATCCATTGTAATGCTAGCTTTCGGATTCTTCGGAGAATCTGGAGCCATGGACTCTACAATAGCATGGGTTATTGGAATGGTTGCATGGATATACATCATATACGAAATCTGGGCTGGAGACGCAAAAGCAGCTTCCAAAGAGGCTAGTGAAGGCGTTCAGTTTGCATTTACTTGGATGACATACATCCTAACTTTC LITVPLQVVEFYLILAAIGVASAMLFWRLLGASIVMLAFGFFGESGAMDSTIAWVIGMVAWIYIIYEIWAGDAKAASKEASEGVQFAFTWMTYILTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACTGTACCTCTACAAGTTGTTGAATTTTATCTAATTTTGGCAGCA---------ATT---GGTGTTGCATCAGCA---ATGCTC------------------------------------TTCTGGAGA---TTGCTAGGTGCATCCATTGTAATGCTAGCTTTCGGATTCTTCGGAGAA---------TCT------------------GGA------------------------------------------------------GCC------ATGGAC---------TCT---------------------------ACAATAGCA------------------TGG------------GTTATTGGAATGGTTGCATGGATATACATCATATACGAAATC---------------TGG------GCT---GGAGACGCAAAAGCA---GCTTCCAAA------GAG---GCTAGTGAAGGCGTT---CAG---TTT---GCA---TTT---ACT---TGGATG---ACATACATCCTAACTTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLILAA---I-GVASA-ML------------FWR-LLGASIVMLAFGFFGE---S------G------------------A--MD---S---------TIA------W----VIGMVAWIYIIYEI-----W--A-GDAKA-ASK--E-ASEGV-Q-F-A-F-T-WM-TYILTF-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ929393 [unk-euryarch-HF70_59C08] PRGD_OTU116_12e09b9a7370265e33225989b8bf663f gb|KJ929393| PRGD_OTU116_12e09b9a7370265e33225989b8bf663f, putative proteorhodopsin gene, partial cds. PRGD_OTU116_12e09b9a7370265e33225989b8bf663f, putative proteorhodopsin gene, partial cds. KJ929393 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTTCTAACTGTACCGTTACAGATTGTTGAATTTTACTTTATTTTAGCAGCAGTTACAACAGTTACAGCGATGTTATTTTGGAGACTTTTAGGATCTTCAATTTTAATGCTTGTTTTTGGATTTCTTGGAGAAACTCAAATGATTGGAGGAAGTTCTATAGTTTGGTGGACTTTAGGAATGGTTTGTTGGTTTTATATTATTTACGAGATTTTTAGAGGCGAGGCCGCAATCCTCAATGAAAATAGCGGTAACGAATCCGGTCAGTTTGCATTTCAATCTTTAAAATGGATTGTAACTGTG FLTVPLQIVEFYFILAAVTTVTAMLFWRLLGSSILMLVFGFLGETQMIGGSSIVWWTLGMVCWFYIIYEIFRGEAAILNENSGNESGQFAFQSLKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCTAACTGTACCGTTACAGATTGTTGAATTTTACTTTATTTTAGCAGCA---------GTT---ACAACAGTTACAGCG---ATGTTA------------------------------------TTTTGGAGA---CTTTTAGGATCTTCAATTTTAATGCTTGTTTTTGGATTTCTTGGAGAA---------ACT------------------CAA------ATG---------------------------------ATT---------------------------------GGA---------------------------GGAAGTTCT------------------ATAGTTTGG---TGGACTTTAGGAATGGTTTGTTGGTTTTATATTATTTACGAGATT---------------TTT------AGA---GGCGAGGCCGCAATCCTCAATGAAAAT------AGC---GGTAACGAATCCGGT---CAG---TTT---GCA---TTT---CAA---TCTTTA---AAATGGATTGTAACTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FLTVPLQIVEFYFILAA---V-TTVTA-ML------------FWR-LLGSSILMLVFGFLGE---T------Q--M-----------I-----------G---------GSS------IVW-WTLGMVCWFYIIYEI-----F--R-GEAAILNEN--S-GNESG-Q-F-A-F-Q-SL-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ929396 [unk-euryarch-HF70_59C08] PRGD_OTU116_d3c9ca32947da247678a8f94efdb9432 gb|KJ929396| PRGD_OTU116_d3c9ca32947da247678a8f94efdb9432, putative proteorhodopsin gene, partial cds. PRGD_OTU116_d3c9ca32947da247678a8f94efdb9432, putative proteorhodopsin gene, partial cds. KJ929396 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683) TTTCTAACAGTACCGTTACAGATTGTTGAATTTTACTTTATTTTAGCAGCAGTTACAACAGTTACAGCGATGTTATTTTGGAGACTTTTAGGATCTTCAATTTTAATGCTTGTTTTTGGATTTCTTGGAGAAACTCAAATGATTGGAGGAAGTTCTATAGTTTGGTGGAGTTTAGGAATGGTTTGTTGGTTTTATATTATTTACGAGATTTTTAGAGGCGAGGCCGCAATCCTCAATGAAAATAGTGGTAACGAATCCGGTCAGTTTGCATTTCAATCTTTAAAATGGATTGTAACTGTG FLTVPLQIVEFYFILAAVTTVTAMLFWRLLGSSILMLVFGFLGETQMIGGSSIVWWSLGMVCWFYIIYEIFRGEAAILNENSGNESGQFAFQSLKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCTAACAGTACCGTTACAGATTGTTGAATTTTACTTTATTTTAGCAGCA---------GTT---ACAACAGTTACAGCG---ATGTTA------------------------------------TTTTGGAGA---CTTTTAGGATCTTCAATTTTAATGCTTGTTTTTGGATTTCTTGGAGAA---------ACT------------------CAA------ATG---------------------------------ATT---------------------------------GGA---------------------------GGAAGTTCT------------------ATAGTTTGG---TGGAGTTTAGGAATGGTTTGTTGGTTTTATATTATTTACGAGATT---------------TTT------AGA---GGCGAGGCCGCAATCCTCAATGAAAAT------AGT---GGTAACGAATCCGGT---CAG---TTT---GCA---TTT---CAA---TCTTTA---AAATGGATTGTAACTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FLTVPLQIVEFYFILAA---V-TTVTA-ML------------FWR-LLGSSILMLVFGFLGE---T------Q--M-----------I-----------G---------GSS------IVW-WSLGMVCWFYIIYEI-----F--R-GEAAILNEN--S-GNESG-Q-F-A-F-Q-SL-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ929392 [unk-euryarch-HF70_59C08] PRGD_OTU116_otuREP_410a5e639bbd24b93739eb8d3bacc666 gb|KJ929392| PRGD_OTU116_otuREP_410a5e639bbd24b93739eb8d3bacc666, putative proteorhodopsin gene, partial cds. PRGD_OTU116_otuREP_410a5e639bbd24b93739eb8d3bacc666, putative proteorhodopsin gene, partial cds. KJ929392 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTTCTAACTGTACCGTTACAGATTGTTGAATTTTACTTTATTTTAGCAGCAGTTACAACAGTTACAGCGATGTTATTTTGGAGGCTTTTAGGATCTTCAGTTTTAATGCTTGTTTTTGGATTTCTTGGAGAAACTCAAATGATTGGAGGAAGTTCTATAATTTGGTGGACTTTAGGAATGGTTTGTTGGTTTTATATTATTTACGAGATTTTTAGAGGCGAGGCCGCAATCCTCAATGAAAATAGCGGTAACGAATCTGGTCAGTTTGCATTTCAATCTTTAAAATGGATTGTAACTGTG FLTVPLQIVEFYFILAAVTTVTAMLFWRLLGSSVLMLVFGFLGETQMIGGSSIIWWTLGMVCWFYIIYEIFRGEAAILNENSGNESGQFAFQSLKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCTAACTGTACCGTTACAGATTGTTGAATTTTACTTTATTTTAGCAGCA---------GTT---ACAACAGTTACAGCG---ATGTTA------------------------------------TTTTGGAGG---CTTTTAGGATCTTCAGTTTTAATGCTTGTTTTTGGATTTCTTGGAGAA---------ACT------------------CAA------ATG---------------------------------ATT---------------------------------GGA---------------------------GGAAGTTCT------------------ATAATTTGG---TGGACTTTAGGAATGGTTTGTTGGTTTTATATTATTTACGAGATT---------------TTT------AGA---GGCGAGGCCGCAATCCTCAATGAAAAT------AGC---GGTAACGAATCTGGT---CAG---TTT---GCA---TTT---CAA---TCTTTA---AAATGGATTGTAACTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FLTVPLQIVEFYFILAA---V-TTVTA-ML------------FWR-LLGSSVLMLVFGFLGE---T------Q--M-----------I-----------G---------GSS------IIW-WTLGMVCWFYIIYEI-----F--R-GEAAILNEN--S-GNESG-Q-F-A-F-Q-SL-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ929395 [unk-euryarch-HF70_59C08] PRGD_OTU116_a306b5c6695cb77d7c75d912cde3265f gb|KJ929395| PRGD_OTU116_a306b5c6695cb77d7c75d912cde3265f, putative proteorhodopsin gene, partial cds. PRGD_OTU116_a306b5c6695cb77d7c75d912cde3265f, putative proteorhodopsin gene, partial cds. KJ929395 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTTTTGACAGTCCCCTTACAAATTGTTGAATTCTACTTTATTTTAGCAGCCGTAACAACAGTTACAGCAACGTTATTTTGGAGACTTTTAGGCTCTTCGGTTTTCATGCTTATTTTTGGTTTTCTTGGAGAAACTCAAATGATAGGAGGAAGTTCTATAGTTTGGTGGACTTTAGGAATGGTTTGTTGGTTTTATATTATTTACGAGATTTTTAAAGGCGAGGCCGCAATCCTCAATGAAAATAGCGGTAATGAGGCCGGACAATTTGCATTTCAATCTTTGAAATGGATTGTCACTGTG FLTVPLQIVEFYFILAAVTTVTATLFWRLLGSSVFMLIFGFLGETQMIGGSSIVWWTLGMVCWFYIIYEIFKGEAAILNENSGNEAGQFAFQSLKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTGACAGTCCCCTTACAAATTGTTGAATTCTACTTTATTTTAGCAGCC---------GTA---ACAACAGTTACAGCA---ACGTTA------------------------------------TTTTGGAGA---CTTTTAGGCTCTTCGGTTTTCATGCTTATTTTTGGTTTTCTTGGAGAA---------ACT------------------CAA------ATG---------------------------------ATA---------------------------------GGA---------------------------GGAAGTTCT------------------ATAGTTTGG---TGGACTTTAGGAATGGTTTGTTGGTTTTATATTATTTACGAGATT---------------TTT------AAA---GGCGAGGCCGCAATCCTCAATGAAAAT------AGC---GGTAATGAGGCCGGA---CAA---TTT---GCA---TTT---CAA---TCTTTG---AAATGGATTGTCACTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FLTVPLQIVEFYFILAA---V-TTVTA-TL------------FWR-LLGSSVFMLIFGFLGE---T------Q--M-----------I-----------G---------GSS------IVW-WTLGMVCWFYIIYEI-----F--K-GEAAILNEN--S-GNEAG-Q-F-A-F-Q-SL-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ929394 [unk-euryarch-HF70_59C08] PRGD_OTU116_6c6973531f6f259130d330d3f4bcad8f gb|KJ929394| PRGD_OTU116_6c6973531f6f259130d330d3f4bcad8f, putative proteorhodopsin gene, partial cds. PRGD_OTU116_6c6973531f6f259130d330d3f4bcad8f, putative proteorhodopsin gene, partial cds. KJ929394 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTTTTGACCGTCCCATTACAAATTGTTGAATTTTACTTTATTCTAGCTGCAGTGACAACAGTTACAGCAATGTTATTTTGGAGACTTTTAGGCTCTTCAGTATTGATGCTTGTTTTTGGATTTCTCGGAGAAACTCAAATGATTGGAGGAAGTTCTATAGTTTGGTGGACATTAGGAATGATTTGTTGGTTTTACATTATCTATGAGATTTTTAGAGGAGAAGCAGCAATTATCAATAAAAATAGTGGTAATGAAGCTGGGCAATTTGCATTTCAATCTTTAAAATGGATAGTTACGATA FLTVPLQIVEFYFILAAVTTVTAMLFWRLLGSSVLMLVFGFLGETQMIGGSSIVWWTLGMICWFYIIYEIFRGEAAIINKNSGNEAGQFAFQSLKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTGACCGTCCCATTACAAATTGTTGAATTTTACTTTATTCTAGCTGCA---------GTG---ACAACAGTTACAGCA---ATGTTA------------------------------------TTTTGGAGA---CTTTTAGGCTCTTCAGTATTGATGCTTGTTTTTGGATTTCTCGGAGAA---------ACT------------------CAA------ATG---------------------------------ATT---------------------------------GGA---------------------------GGAAGTTCT------------------ATAGTTTGG---TGGACATTAGGAATGATTTGTTGGTTTTACATTATCTATGAGATT---------------TTT------AGA---GGAGAAGCAGCAATTATCAATAAAAAT------AGT---GGTAATGAAGCTGGG---CAA---TTT---GCA---TTT---CAA---TCTTTA---AAATGGATAGTTACGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FLTVPLQIVEFYFILAA---V-TTVTA-ML------------FWR-LLGSSVLMLVFGFLGE---T------Q--M-----------I-----------G---------GSS------IVW-WTLGMICWFYIIYEI-----F--R-GEAAIINKN--S-GNEAG-Q-F-A-F-Q-SL-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ929847 [unk-euryarch-HF70_59C08] PRGD_OTU298_otuREP_1affe84613d49bbff4f8c60c7443e07f gb|KJ929847| PRGD_OTU298_otuREP_1affe84613d49bbff4f8c60c7443e07f, putative proteorhodopsin gene, partial cds. PRGD_OTU298_otuREP_1affe84613d49bbff4f8c60c7443e07f, putative proteorhodopsin gene, partial cds. KJ929847 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTTCTAACTGTACCGTTACAGATTGTTGAATTTTACTTTATTTTAGCAGCAGTTACAACAGTTACAGCGATGTTATTTTGGAGGCTTTTAGGATCTTCAGTTTTAATGCTTGTTTTTGGATTTCTTGGAGAAACTCAAATGATTGGAGGAAGTTCTATAATTTGGTGGACTTTAGGAATGGTTTGTTGGTTTTATATCATATATGAAATCTATGCCGGTGAAACTTCAGGACTCTCAAAAAGCATTAGCTCTGAATCAGTAAAATCTGCTTACAAAACAATGAGAAATATTGTGGTATTT FLTVPLQIVEFYFILAAVTTVTAMLFWRLLGSSVLMLVFGFLGETQMIGGSSIIWWTLGMVCWFYIIYEIYAGETSGLSKSISSESVKSAYKTMRNIVVF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCTAACTGTACCGTTACAGATTGTTGAATTTTACTTTATTTTAGCAGCA---------GTT---ACAACAGTTACAGCG---ATGTTA------------------------------------TTTTGGAGG---CTTTTAGGATCTTCAGTTTTAATGCTTGTTTTTGGATTTCTTGGAGAA---------ACT------------------CAA------ATG---------------------------------ATT---------------------------------GGA---------------------------GGAAGTTCT------------------ATAATTTGG---TGGACTTTAGGAATGGTTTGTTGGTTTTATATCATATATGAAATC---------------TAT------GCC---GGTGAAACTTCAGGACTCTCAAAAAGC------ATT---AGCTCTGAATCAGTA---AAA---TCT---GCT---TAC---AAA---ACAATG---AGAAATATTGTGGTATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FLTVPLQIVEFYFILAA---V-TTVTA-ML------------FWR-LLGSSVLMLVFGFLGE---T------Q--M-----------I-----------G---------GSS------IIW-WTLGMVCWFYIIYEI-----Y--A-GETSGLSKS--I-SSESV-K-S-A-Y-K-TM-RNIVVF-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-HF70_59C08]_KJ929895 [unk-euryarch-HF70_59C08] PRGD_OTU346_otuREP_8bf4d0d9cf826fdba021e37abb2c66fd gb|KJ929895| PRGD_OTU346_otuREP_8bf4d0d9cf826fdba021e37abb2c66fd, putative proteorhodopsin gene, partial cds. PRGD_OTU346_otuREP_8bf4d0d9cf826fdba021e37abb2c66fd, putative proteorhodopsin gene, partial cds. KJ929895 [[proteorhodopsin/euryarcheaeal-like/HF70_39H11 HF70_59C08-like subcluster]] proteorhodopsin euryarcheaeal-like HF70_39H11 HF70_59C08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTTCTAACTGTACCGTTACAGATTGTTGAATTTTACTTTATTTTAGCAGCAGTTACAACAGTTACAGCGATGTTATTTTGGAGGCTTTTAGGATCTTCAGTTTTAATGCTTGTTTTTGGATTTCTTGGAGAAACTCAAATGATTGGAGGAAGTTCTATAATTTGGTGGACTTTAGGAATGGTTTGTTGGTTTTATATCCTTTATTATATCTTTGCTGGTGACGCAGGGACGGCAATGGGTAATGCATCTGAAGGCGTTCAGTCAGCGTTTAAGGCTATGCGCTTAATCGTTTTAATT FLTVPLQIVEFYFILAAVTTVTAMLFWRLLGSSVLMLVFGFLGETQMIGGSSIIWWTLGMVCWFYILYYIFAGDAGTAMGNASEGVQSAFKAMRLIVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCTAACTGTACCGTTACAGATTGTTGAATTTTACTTTATTTTAGCAGCA---------GTT---ACAACAGTTACAGCG---ATGTTA------------------------------------TTTTGGAGG---CTTTTAGGATCTTCAGTTTTAATGCTTGTTTTTGGATTTCTTGGAGAA---------ACT------------------CAA------ATG---------------------------------ATT---------------------------------GGA---------------------------GGAAGTTCT------------------ATAATTTGG---TGGACTTTAGGAATGGTTTGTTGGTTTTATATCCTTTATTATATC---------------TTT------GCT---GGTGAC---GCAGGGACGGCAATGGGT------AAT---GCATCTGAAGGCGTT---CAG---TCA---GCG---TTT---AAG---GCTATG---CGCTTAATCGTTTTAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FLTVPLQIVEFYFILAA---V-TTVTA-ML------------FWR-LLGSSVLMLVFGFLGE---T------Q--M-----------I-----------G---------GSS------IIW-WTLGMVCWFYILYYI-----F--A-GD-AGTAMG--N-ASEGV-Q-S-A-F-K-AM-RLIVLI-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927723 [unk-euryarch-a] PRGD_OTU015_cfdca24e449d783ff9a1f4cf5cb49367 gb|KJ927723| PRGD_OTU015_cfdca24e449d783ff9a1f4cf5cb49367, putative proteorhodopsin gene, partial cds. PRGD_OTU015_cfdca24e449d783ff9a1f4cf5cb49367, putative proteorhodopsin gene, partial cds. KJ927723 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATTACCGTTCCACTACAGATTGTTGAGTTTTACTTAATTCTTGTTGCAGTAACTGCTGTTACAAGTGCACTATTCTGGAGATTGCTTGGTGCATCTCTTGTAATGCTTGTTTTTGGATTCTTAGGAGAGGCTGGAATTCTTGATGCCACTTTAGGGTTTGTAATCGGAATGGCTGGATGGATCTATATCATTTACGAAGTATTTAGCGGAGAAGCTTCCAAGTTGGCAGCAGGAAGTGGAAATAAAGGTGGTCAGTTTGCCTTTAATACATTAAGACTAATACTTACCGCA LITVPLQIVEFYLILVAVTAVTSALFWRLLGASLVMLVFGFLGEAGILDATLGFVIGMAGWIYIIYEVFSGEASKLAAGSGNKGGQFAFNTLRLILTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACCGTTCCACTACAGATTGTTGAGTTTTACTTAATTCTTGTTGCA---------GTA---ACTGCTGTTACAAGT---GCACTA------------------------------------TTCTGGAGA---TTGCTTGGTGCATCTCTTGTAATGCTTGTTTTTGGATTCTTAGGAGAG---------GCT------------------GGA------ATT---------------------------------CTT------------------------------------------------------------------GATGCC------------------ACTTTAGGG---TTTGTAATCGGAATGGCTGGATGGATCTATATCATTTACGAAGTA---------------TTT------AGC---GGAGAAGCTTCCAAGTTGGCAGCAGGA------AGT---GGAAATAAAGGTGGT---CAG---TTT---GCC---TTT---AAT---ACATTA---AGACTAATACTTACCGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILVA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--I-----------L----------------------DA------TLG-FVIGMAGWIYIIYEV-----F--S-GEASKLAAG--S-GNKGG-Q-F-A-F-N-TL-RLILTA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927728 [unk-euryarch-a] PRGD_OTU015_dec3ffdba500bf309e9fdf2cc3c9f016 gb|KJ927728| PRGD_OTU015_dec3ffdba500bf309e9fdf2cc3c9f016, putative proteorhodopsin gene, partial cds. PRGD_OTU015_dec3ffdba500bf309e9fdf2cc3c9f016, putative proteorhodopsin gene, partial cds. KJ927728 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATTACGGTTCCACTACAGATTGTTGAGTTTTACTTAATTCTTGTTGCAGTAACTGCTGTTACAAGTGCACTGTTCTGGAGATTGCTAGGTGCATCTCTTGTAATGCTTGTTTTTGGATTCTTAGGAGAAGCTGGAATTCTTGATGCCACTTTAGGGTTTGTAATCGGAATGGCTGGATGGATCTATATCATTTACGAAGTATTTAGCGGAGAAGCTTCCAAGTTGGCAGCAGGAAGTGGAAATAAAGGTGGTCAGTTTGCCTTTAATACATTAAGACTAATACTTACCGCA LITVPLQIVEFYLILVAVTAVTSALFWRLLGASLVMLVFGFLGEAGILDATLGFVIGMAGWIYIIYEVFSGEASKLAAGSGNKGGQFAFNTLRLILTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACGGTTCCACTACAGATTGTTGAGTTTTACTTAATTCTTGTTGCA---------GTA---ACTGCTGTTACAAGT---GCACTG------------------------------------TTCTGGAGA---TTGCTAGGTGCATCTCTTGTAATGCTTGTTTTTGGATTCTTAGGAGAA---------GCT------------------GGA------ATT---------------------------------CTT------------------------------------------------------------------GATGCC------------------ACTTTAGGG---TTTGTAATCGGAATGGCTGGATGGATCTATATCATTTACGAAGTA---------------TTT------AGC---GGAGAAGCTTCCAAGTTGGCAGCAGGA------AGT---GGAAATAAAGGTGGT---CAG---TTT---GCC---TTT---AAT---ACATTA---AGACTAATACTTACCGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILVA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--I-----------L----------------------DA------TLG-FVIGMAGWIYIIYEV-----F--S-GEASKLAAG--S-GNKGG-Q-F-A-F-N-TL-RLILTA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927694 [unk-euryarch-a] PRGD_OTU015_38b4b08d72b0dcee00fe96f533ee7e8c gb|KJ927694| PRGD_OTU015_38b4b08d72b0dcee00fe96f533ee7e8c, putative proteorhodopsin gene, partial cds. PRGD_OTU015_38b4b08d72b0dcee00fe96f533ee7e8c, putative proteorhodopsin gene, partial cds. KJ927694 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-14.48, 113.45; -33.28, 45.35) TTGATTACCGTTCCACTACAGATTGTTGAGTTTTACTTAATTCTTGTTGCAGTAACTGCGGTAACAAGTGCACTGTTCTGGAGATTGCTAGGTGCATCTCTCGTAATGCTTGTTTTTGGATTCTTAGGAGAGGCTGGAATTCTTGATGCTACCCTAGGTTTTGTAATCGGAATGGCTGGATGGATCTATATCATTTACGAAGTATTCAGCGGAGAAGCTTCCAAGTTGGCAGCAGGAAGTGGAAATAAAGGTGGTCAGTTTGCCTTTAATACATTAAGACTAATACTTACCGCA LITVPLQIVEFYLILVAVTAVTSALFWRLLGASLVMLVFGFLGEAGILDATLGFVIGMAGWIYIIYEVFSGEASKLAAGSGNKGGQFAFNTLRLILTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACCGTTCCACTACAGATTGTTGAGTTTTACTTAATTCTTGTTGCA---------GTA---ACTGCGGTAACAAGT---GCACTG------------------------------------TTCTGGAGA---TTGCTAGGTGCATCTCTCGTAATGCTTGTTTTTGGATTCTTAGGAGAG---------GCT------------------GGA------ATT---------------------------------CTT------------------------------------------------------------------GATGCT------------------ACCCTAGGT---TTTGTAATCGGAATGGCTGGATGGATCTATATCATTTACGAAGTA---------------TTC------AGC---GGAGAAGCTTCCAAGTTGGCAGCAGGA------AGT---GGAAATAAAGGTGGT---CAG---TTT---GCC---TTT---AAT---ACATTA---AGACTAATACTTACCGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILVA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--I-----------L----------------------DA------TLG-FVIGMAGWIYIIYEV-----F--S-GEASKLAAG--S-GNKGG-Q-F-A-F-N-TL-RLILTA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927702 [unk-euryarch-a] PRGD_OTU015_59f6cfcd50e2cd6f23325d8ae8ff024a gb|KJ927702| PRGD_OTU015_59f6cfcd50e2cd6f23325d8ae8ff024a, putative proteorhodopsin gene, partial cds. PRGD_OTU015_59f6cfcd50e2cd6f23325d8ae8ff024a, putative proteorhodopsin gene, partial cds. KJ927702 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATTACGGTTCCACTACAGATTGTTGAGTTTTACTTAATTCTTGTTGCAGTAACTGCTGTTACAAGTGCATTGTTCTGGAGATTGCTAGGTGCATCTCTGGTAATGCTTGTTTTTGGATTCTTAGGAGAGGCTGGAATTCTTGATGCTACTCTAGGTTTTGTAATCGGAATGGCTGGATGGATCTACATCATTTACGAAGTATTTAGCGGAGAAGCTTCCAAGTTGGCAGCAGGAAGTGGAAATAAAGGTGGTCAGTTTGCCTTTAATACATTAAGGCTAATACTTACCGCA LITVPLQIVEFYLILVAVTAVTSALFWRLLGASLVMLVFGFLGEAGILDATLGFVIGMAGWIYIIYEVFSGEASKLAAGSGNKGGQFAFNTLRLILTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACGGTTCCACTACAGATTGTTGAGTTTTACTTAATTCTTGTTGCA---------GTA---ACTGCTGTTACAAGT---GCATTG------------------------------------TTCTGGAGA---TTGCTAGGTGCATCTCTGGTAATGCTTGTTTTTGGATTCTTAGGAGAG---------GCT------------------GGA------ATT---------------------------------CTT------------------------------------------------------------------GATGCT------------------ACTCTAGGT---TTTGTAATCGGAATGGCTGGATGGATCTACATCATTTACGAAGTA---------------TTT------AGC---GGAGAAGCTTCCAAGTTGGCAGCAGGA------AGT---GGAAATAAAGGTGGT---CAG---TTT---GCC---TTT---AAT---ACATTA---AGGCTAATACTTACCGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILVA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--I-----------L----------------------DA------TLG-FVIGMAGWIYIIYEV-----F--S-GEASKLAAG--S-GNKGG-Q-F-A-F-N-TL-RLILTA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927732 [unk-euryarch-a] PRGD_OTU015_ef37a2e3c01c4acc8d3a9dd157140111 gb|KJ927732| PRGD_OTU015_ef37a2e3c01c4acc8d3a9dd157140111, putative proteorhodopsin gene, partial cds. PRGD_OTU015_ef37a2e3c01c4acc8d3a9dd157140111, putative proteorhodopsin gene, partial cds. KJ927732 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATTACAGTTCCACTACAGATTGTTGAGTTTTACTTAATTCTTGTTGCAGTAACTGCTGTTACAAGTGCACTGTTCTGGAGATTGCTAGGTGCATCTCTTGTAATGCTTGTTTTTGGATTCTTAGGAGAGGCTGGAATTCTTGATGCTACTCTAGGTTTTGTAATCGGAATGGCTGGATGGATCTATATCATTTACGAAGTATTCAGCGGAGAAGCTTCCAAGTTGGCAGCAGGAAGTGGAAATAAAGGTGGTCAGTTTGCCTTTAATACATTGAGGCTAATACTTACCGCA LITVPLQIVEFYLILVAVTAVTSALFWRLLGASLVMLVFGFLGEAGILDATLGFVIGMAGWIYIIYEVFSGEASKLAAGSGNKGGQFAFNTLRLILTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACAGTTCCACTACAGATTGTTGAGTTTTACTTAATTCTTGTTGCA---------GTA---ACTGCTGTTACAAGT---GCACTG------------------------------------TTCTGGAGA---TTGCTAGGTGCATCTCTTGTAATGCTTGTTTTTGGATTCTTAGGAGAG---------GCT------------------GGA------ATT---------------------------------CTT------------------------------------------------------------------GATGCT------------------ACTCTAGGT---TTTGTAATCGGAATGGCTGGATGGATCTATATCATTTACGAAGTA---------------TTC------AGC---GGAGAAGCTTCCAAGTTGGCAGCAGGA------AGT---GGAAATAAAGGTGGT---CAG---TTT---GCC---TTT---AAT---ACATTG---AGGCTAATACTTACCGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILVA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--I-----------L----------------------DA------TLG-FVIGMAGWIYIIYEV-----F--S-GEASKLAAG--S-GNKGG-Q-F-A-F-N-TL-RLILTA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927695 [unk-euryarch-a] PRGD_OTU015_3b1cf3c66d4c676a2c8889a7f284ec8f gb|KJ927695| PRGD_OTU015_3b1cf3c66d4c676a2c8889a7f284ec8f, putative proteorhodopsin gene, partial cds. PRGD_OTU015_3b1cf3c66d4c676a2c8889a7f284ec8f, putative proteorhodopsin gene, partial cds. KJ927695 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTGATTACGGTTCCACTACAGATTGTTGAGTTTTACTTAATCCTTGTTGCAGTAACTGCTGTTACAAGTGCACTGTTCTGGAGATTGCTAGGTGCATCTCTTGTAATGCTTGTTTTTGGATTTTTAGGAGAAGCTGGAATTCTTGATGCTACTCTAGGTTTTGTAATCGGAATGGCTGGATGGATCTATATCATTTACGAAGTATTCAGCGGAGAAGCTTCCAAGTTGGCAGCAGGAAGTGGAAATAAAGGTGGTCAGTTTGCCTTTAATACATTAAGATTAATACTTACCGCA LITVPLQIVEFYLILVAVTAVTSALFWRLLGASLVMLVFGFLGEAGILDATLGFVIGMAGWIYIIYEVFSGEASKLAAGSGNKGGQFAFNTLRLILTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACGGTTCCACTACAGATTGTTGAGTTTTACTTAATCCTTGTTGCA---------GTA---ACTGCTGTTACAAGT---GCACTG------------------------------------TTCTGGAGA---TTGCTAGGTGCATCTCTTGTAATGCTTGTTTTTGGATTTTTAGGAGAA---------GCT------------------GGA------ATT---------------------------------CTT------------------------------------------------------------------GATGCT------------------ACTCTAGGT---TTTGTAATCGGAATGGCTGGATGGATCTATATCATTTACGAAGTA---------------TTC------AGC---GGAGAAGCTTCCAAGTTGGCAGCAGGA------AGT---GGAAATAAAGGTGGT---CAG---TTT---GCC---TTT---AAT---ACATTA---AGATTAATACTTACCGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILVA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--I-----------L----------------------DA------TLG-FVIGMAGWIYIIYEV-----F--S-GEASKLAAG--S-GNKGG-Q-F-A-F-N-TL-RLILTA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927731 [unk-euryarch-a] PRGD_OTU015_ecfa69dffa1bfd785ebb2140b238ed72 gb|KJ927731| PRGD_OTU015_ecfa69dffa1bfd785ebb2140b238ed72, putative proteorhodopsin gene, partial cds. PRGD_OTU015_ecfa69dffa1bfd785ebb2140b238ed72, putative proteorhodopsin gene, partial cds. KJ927731 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATTACTGTTCCACTACAGATTGTTGAGTTTTACTTAATTCTTGTTGCAGTAACTGCTGTTACAAGTGCACTGTTCTGGAGATTGCTAGGTGCATCTCTCGTAATGCTTGTTTTTGGATTCTTAGGAGAGGCTGGAATTCTTGATGCTACTTTGGGTTTTATAATTGGAATGGCTGGCTGGATCTATATCATTTACGAAGTATTCAGCGGAGAAGCTTCCAAGTTGGCAGCAGGAAGCGGAAACAAAGGTGGTCAGTTTGCCTTTAATACATTAAGACTAATACTTACCGCA LITVPLQIVEFYLILVAVTAVTSALFWRLLGASLVMLVFGFLGEAGILDATLGFIIGMAGWIYIIYEVFSGEASKLAAGSGNKGGQFAFNTLRLILTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTTCCACTACAGATTGTTGAGTTTTACTTAATTCTTGTTGCA---------GTA---ACTGCTGTTACAAGT---GCACTG------------------------------------TTCTGGAGA---TTGCTAGGTGCATCTCTCGTAATGCTTGTTTTTGGATTCTTAGGAGAG---------GCT------------------GGA------ATT---------------------------------CTT------------------------------------------------------------------GATGCT------------------ACTTTGGGT---TTTATAATTGGAATGGCTGGCTGGATCTATATCATTTACGAAGTA---------------TTC------AGC---GGAGAAGCTTCCAAGTTGGCAGCAGGA------AGC---GGAAACAAAGGTGGT---CAG---TTT---GCC---TTT---AAT---ACATTA---AGACTAATACTTACCGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILVA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--I-----------L----------------------DA------TLG-FIIGMAGWIYIIYEV-----F--S-GEASKLAAG--S-GNKGG-Q-F-A-F-N-TL-RLILTA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927703 [unk-euryarch-a] PRGD_OTU015_642eece941ce87a42da0b3a2493f079c gb|KJ927703| PRGD_OTU015_642eece941ce87a42da0b3a2493f079c, putative proteorhodopsin gene, partial cds. PRGD_OTU015_642eece941ce87a42da0b3a2493f079c, putative proteorhodopsin gene, partial cds. KJ927703 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683) TTGATTACGGTTCCACTACAGATTGTTGAGTTTTACTTAATTCTTGTTGCAGTAACTGCTGTTACAAGTGCATTGTTCTGGAGATTGCTTGGTGCATCTCTGGTAATGCTTGTTTTTGGATTTTTAGGAGAGGCTGGAATTCTTGATGCTACTCTTGGTTTTGTAATCGGAATGGCTGGCTGGATCTACATCATTTATGAAGTCTTTAGTGGTGAGGCTTCCAAGTTGGCGGCAGGAAGTGGAAATAAAGGTGGTCAGTTTGCTTTCAATACATTAAGACTAATACTTACCGCA LITVPLQIVEFYLILVAVTAVTSALFWRLLGASLVMLVFGFLGEAGILDATLGFVIGMAGWIYIIYEVFSGEASKLAAGSGNKGGQFAFNTLRLILTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACGGTTCCACTACAGATTGTTGAGTTTTACTTAATTCTTGTTGCA---------GTA---ACTGCTGTTACAAGT---GCATTG------------------------------------TTCTGGAGA---TTGCTTGGTGCATCTCTGGTAATGCTTGTTTTTGGATTTTTAGGAGAG---------GCT------------------GGA------ATT---------------------------------CTT------------------------------------------------------------------GATGCT------------------ACTCTTGGT---TTTGTAATCGGAATGGCTGGCTGGATCTACATCATTTATGAAGTC---------------TTT------AGT---GGTGAGGCTTCCAAGTTGGCGGCAGGA------AGT---GGAAATAAAGGTGGT---CAG---TTT---GCT---TTC---AAT---ACATTA---AGACTAATACTTACCGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILVA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--I-----------L----------------------DA------TLG-FVIGMAGWIYIIYEV-----F--S-GEASKLAAG--S-GNKGG-Q-F-A-F-N-TL-RLILTA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927713 [unk-euryarch-a] PRGD_OTU015_9a8001b87053d917a954834f1b398728 gb|KJ927713| PRGD_OTU015_9a8001b87053d917a954834f1b398728, putative proteorhodopsin gene, partial cds. PRGD_OTU015_9a8001b87053d917a954834f1b398728, putative proteorhodopsin gene, partial cds. KJ927713 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATTACGGTACCACTGCAGATTGTAGAGTTTTACTTAATTCTTGTTGCAGTAACTGCTGTTACAAGTGCACTGTTCTGGAGATTATTAGGTGCTTCTCTAGTAATGCTTGTTTTTGGATTTTTAGGAGAGGCTGGAATTCTTGATGCTACTCTAGGTTTTGTAATAGGAATGGCTGGCTGGATCTACATCATTTATGAAGTATTTAGTGGTGAGGCTTCCAAGTTGGCGGCAGGAAGTGGAAACAAAGGTGGTCAGTTTGCATTCAATACATTAAGATTAATACTTACCGCA LITVPLQIVEFYLILVAVTAVTSALFWRLLGASLVMLVFGFLGEAGILDATLGFVIGMAGWIYIIYEVFSGEASKLAAGSGNKGGQFAFNTLRLILTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACGGTACCACTGCAGATTGTAGAGTTTTACTTAATTCTTGTTGCA---------GTA---ACTGCTGTTACAAGT---GCACTG------------------------------------TTCTGGAGA---TTATTAGGTGCTTCTCTAGTAATGCTTGTTTTTGGATTTTTAGGAGAG---------GCT------------------GGA------ATT---------------------------------CTT------------------------------------------------------------------GATGCT------------------ACTCTAGGT---TTTGTAATAGGAATGGCTGGCTGGATCTACATCATTTATGAAGTA---------------TTT------AGT---GGTGAGGCTTCCAAGTTGGCGGCAGGA------AGT---GGAAACAAAGGTGGT---CAG---TTT---GCA---TTC---AAT---ACATTA---AGATTAATACTTACCGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILVA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--I-----------L----------------------DA------TLG-FVIGMAGWIYIIYEV-----F--S-GEASKLAAG--S-GNKGG-Q-F-A-F-N-TL-RLILTA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927683 [unk-euryarch-a] PRGD_OTU015_11dc1db2c6301571561371c770762f72 gb|KJ927683| PRGD_OTU015_11dc1db2c6301571561371c770762f72, putative proteorhodopsin gene, partial cds. PRGD_OTU015_11dc1db2c6301571561371c770762f72, putative proteorhodopsin gene, partial cds. KJ927683 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) TTGATTACGGTTCCACTACAGATTGTTGAGTTTTACTTAATTCTTGTTGCAGTAACTGCTGTTACAAGTGCATTGTTCTGGAGATTGCTAGGTGCATCTCTAGTAATGCTTGTTTTTGGATTTTTAGGAGAGGCTGGACTTCTTGATGCTACCCTGGGTTTTGTAATCGGAATGGCTGGCTGGATCTATATCATTTACGAAGTATTCAGCGGAGAAGCTTCTAAGCTTGCAGCAGGAAGCGGAAACAAAGGCGGTCAATTTGCTTTCAATACATTAAGACTTATACTTACCGCA LITVPLQIVEFYLILVAVTAVTSALFWRLLGASLVMLVFGFLGEAGLLDATLGFVIGMAGWIYIIYEVFSGEASKLAAGSGNKGGQFAFNTLRLILTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACGGTTCCACTACAGATTGTTGAGTTTTACTTAATTCTTGTTGCA---------GTA---ACTGCTGTTACAAGT---GCATTG------------------------------------TTCTGGAGA---TTGCTAGGTGCATCTCTAGTAATGCTTGTTTTTGGATTTTTAGGAGAG---------GCT------------------GGA------CTT---------------------------------CTT------------------------------------------------------------------GATGCT------------------ACCCTGGGT---TTTGTAATCGGAATGGCTGGCTGGATCTATATCATTTACGAAGTA---------------TTC------AGC---GGAGAAGCTTCTAAGCTTGCAGCAGGA------AGC---GGAAACAAAGGCGGT---CAA---TTT---GCT---TTC---AAT---ACATTA---AGACTTATACTTACCGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILVA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--L-----------L----------------------DA------TLG-FVIGMAGWIYIIYEV-----F--S-GEASKLAAG--S-GNKGG-Q-F-A-F-N-TL-RLILTA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927707 [unk-euryarch-a] PRGD_OTU015_70ed0652208e9a1cfe00b917db59deb4 gb|KJ927707| PRGD_OTU015_70ed0652208e9a1cfe00b917db59deb4, putative proteorhodopsin gene, partial cds. PRGD_OTU015_70ed0652208e9a1cfe00b917db59deb4, putative proteorhodopsin gene, partial cds. KJ927707 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-33.28, 45.35) TTGATTACGGTTCCACTACAGATTGTTGAATTTTACTTAATCCTTGTTGCAGTAACTGCTGTCACAAGTGCATTGTTCTGGAGATTGCTGGGTGCATCTCTAGTAATGCTTGTTTTTGGATTTTTAGGAGAGGCTGGAATTCTTGATGCTACTCTAGGTTTTGTAATCGGAATGGCTGGCTGGATCTATATCATCTACGAAGTATTTAGCGGAGAAGCGTCTAAGCTTGCAGCAGGAAGCGGAAACAAGGGCGGTCAATTTGCTTTCAATACATTAAGACTTATACTTACTGCA LITVPLQIVEFYLILVAVTAVTSALFWRLLGASLVMLVFGFLGEAGILDATLGFVIGMAGWIYIIYEVFSGEASKLAAGSGNKGGQFAFNTLRLILTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACGGTTCCACTACAGATTGTTGAATTTTACTTAATCCTTGTTGCA---------GTA---ACTGCTGTCACAAGT---GCATTG------------------------------------TTCTGGAGA---TTGCTGGGTGCATCTCTAGTAATGCTTGTTTTTGGATTTTTAGGAGAG---------GCT------------------GGA------ATT---------------------------------CTT------------------------------------------------------------------GATGCT------------------ACTCTAGGT---TTTGTAATCGGAATGGCTGGCTGGATCTATATCATCTACGAAGTA---------------TTT------AGC---GGAGAAGCGTCTAAGCTTGCAGCAGGA------AGC---GGAAACAAGGGCGGT---CAA---TTT---GCT---TTC---AAT---ACATTA---AGACTTATACTTACTGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILVA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--I-----------L----------------------DA------TLG-FVIGMAGWIYIIYEV-----F--S-GEASKLAAG--S-GNKGG-Q-F-A-F-N-TL-RLILTA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927693 [unk-euryarch-a] PRGD_OTU015_385d26f959e4815b2fdae2623e2019d5 gb|KJ927693| PRGD_OTU015_385d26f959e4815b2fdae2623e2019d5, putative proteorhodopsin gene, partial cds. PRGD_OTU015_385d26f959e4815b2fdae2623e2019d5, putative proteorhodopsin gene, partial cds. KJ927693 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) TTGATTACGGTTCCACTACAGATTGTTGAGTTTTACTTAATCCTTGTTGCAGTAACTGCTGTTACAAGTGCATTGTTCTGGAGATTGCTAGGTGCATCTCTAGTAATGCTTGTTTTTGGGTTTTTAGGAGAGGCTGGAATTCTTGATGCTACTCTGGGTTTTGTAATCGGAATGGCTGGCTGGATCTACATCATTTACGAAGTATTCAGTGGAGAAGCTTCTAAGCTTGCAGCAGGAAGCGGGAACAAAGGCGGTCAGTTTGCCTTTAATACATTAAGACTAATACTTACTGCA LITVPLQIVEFYLILVAVTAVTSALFWRLLGASLVMLVFGFLGEAGILDATLGFVIGMAGWIYIIYEVFSGEASKLAAGSGNKGGQFAFNTLRLILTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACGGTTCCACTACAGATTGTTGAGTTTTACTTAATCCTTGTTGCA---------GTA---ACTGCTGTTACAAGT---GCATTG------------------------------------TTCTGGAGA---TTGCTAGGTGCATCTCTAGTAATGCTTGTTTTTGGGTTTTTAGGAGAG---------GCT------------------GGA------ATT---------------------------------CTT------------------------------------------------------------------GATGCT------------------ACTCTGGGT---TTTGTAATCGGAATGGCTGGCTGGATCTACATCATTTACGAAGTA---------------TTC------AGT---GGAGAAGCTTCTAAGCTTGCAGCAGGA------AGC---GGGAACAAAGGCGGT---CAG---TTT---GCC---TTT---AAT---ACATTA---AGACTAATACTTACTGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILVA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--I-----------L----------------------DA------TLG-FVIGMAGWIYIIYEV-----F--S-GEASKLAAG--S-GNKGG-Q-F-A-F-N-TL-RLILTA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927716 [unk-euryarch-a] PRGD_OTU015_a91bb362eafcf145136bdcd767d7c57d gb|KJ927716| PRGD_OTU015_a91bb362eafcf145136bdcd767d7c57d, putative proteorhodopsin gene, partial cds. PRGD_OTU015_a91bb362eafcf145136bdcd767d7c57d, putative proteorhodopsin gene, partial cds. KJ927716 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) TTGATTACGGTTCCACTACAGATTGTTGAGTTTTACTTAATTCTTGTTGCAGTAACTGCTGTTACAAGTGCATTGTTCTGGAGATTGCTAGGCGCATCTCTGGTAATGCTTGTTTTTGGATTTTTAGGAGAGGCTGGAATTCTTGATGCTACTCTAGGTTTTGTAATCGGAATGGCTGGCTGGATCTATATCATTTACGAAGTATTCAGTGGAGAAGCTTCTAAGCTTGCAGCAGGAAGCGGGAACAAAGGCGGTCAGTTTGCGTTCAATACATTAAGACTAATTCTTACCGCA LITVPLQIVEFYLILVAVTAVTSALFWRLLGASLVMLVFGFLGEAGILDATLGFVIGMAGWIYIIYEVFSGEASKLAAGSGNKGGQFAFNTLRLILTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACGGTTCCACTACAGATTGTTGAGTTTTACTTAATTCTTGTTGCA---------GTA---ACTGCTGTTACAAGT---GCATTG------------------------------------TTCTGGAGA---TTGCTAGGCGCATCTCTGGTAATGCTTGTTTTTGGATTTTTAGGAGAG---------GCT------------------GGA------ATT---------------------------------CTT------------------------------------------------------------------GATGCT------------------ACTCTAGGT---TTTGTAATCGGAATGGCTGGCTGGATCTATATCATTTACGAAGTA---------------TTC------AGT---GGAGAAGCTTCTAAGCTTGCAGCAGGA------AGC---GGGAACAAAGGCGGT---CAG---TTT---GCG---TTC---AAT---ACATTA---AGACTAATTCTTACCGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILVA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--I-----------L----------------------DA------TLG-FVIGMAGWIYIIYEV-----F--S-GEASKLAAG--S-GNKGG-Q-F-A-F-N-TL-RLILTA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927689 [unk-euryarch-a] PRGD_OTU015_2adbdc9d737a44ff2b5510c9b16d4668 gb|KJ927689| PRGD_OTU015_2adbdc9d737a44ff2b5510c9b16d4668, putative proteorhodopsin gene, partial cds. PRGD_OTU015_2adbdc9d737a44ff2b5510c9b16d4668, putative proteorhodopsin gene, partial cds. KJ927689 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), Indian Ocean (-23.5956, 69.0419) TTAATTACTGTTCCACTTCAAATTGTAGAATTTTATTTAATTCTTGTCGCAGTAACTGCTGTTACTAGTGCACTATTTTGGAGATTGCTGGGTGCCTCTCTCGTAATGCTAGTTTTTGGATTTTTAGGAGAAGCAGGAATTCTTGATGCTACTCTCGGTTTTGTGATCGGAATGGCAGGCTGGATATATATCATTTACGAAGTATTCAGCGGAGAAGCTTCTAAACTTTCAGCAGGAAGTGGAAACAAAGGTGGCCAGTTTGCTTTCAATACATTAAGACTCATATTAACCGCT LITVPLQIVEFYLILVAVTAVTSALFWRLLGASLVMLVFGFLGEAGILDATLGFVIGMAGWIYIIYEVFSGEASKLSAGSGNKGGQFAFNTLRLILTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTTCCACTTCAAATTGTAGAATTTTATTTAATTCTTGTCGCA---------GTA---ACTGCTGTTACTAGT---GCACTA------------------------------------TTTTGGAGA---TTGCTGGGTGCCTCTCTCGTAATGCTAGTTTTTGGATTTTTAGGAGAA---------GCA------------------GGA------ATT---------------------------------CTT------------------------------------------------------------------GATGCT------------------ACTCTCGGT---TTTGTGATCGGAATGGCAGGCTGGATATATATCATTTACGAAGTA---------------TTC------AGC---GGAGAAGCTTCTAAACTTTCAGCAGGA------AGT---GGAAACAAAGGTGGC---CAG---TTT---GCT---TTC---AAT---ACATTA---AGACTCATATTAACCGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILVA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--I-----------L----------------------DA------TLG-FVIGMAGWIYIIYEV-----F--S-GEASKLSAG--S-GNKGG-Q-F-A-F-N-TL-RLILTA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927691 [unk-euryarch-a] PRGD_OTU015_2c95a2c54229e0948ae4efe02a8d0941 gb|KJ927691| PRGD_OTU015_2c95a2c54229e0948ae4efe02a8d0941, putative proteorhodopsin gene, partial cds. PRGD_OTU015_2c95a2c54229e0948ae4efe02a8d0941, putative proteorhodopsin gene, partial cds. KJ927691 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-23.5956, 69.0419) TTAATTACTGTTCCACTTCAAATTGTAGAATTTTATTTAATTCTTGTCGCAGTAACTGCTGTTACTAGTGCACTATTTTGGAGATTGCTGGGTGCCTCTCTTGTAATGCTAGTTTTTGGATTTTTAGGGGAAGCAGGAATTCTTGATGCTACTCTCGGTTTTGTGATCGGAATGGCAGGCTGGATATATATCATTTACGAAGTATTCAGCGGAGAAGCTTCTAAACTTTCAGCAGGAAGTGGAAACAAAGGTGGCCAGTTTGCTTTCAATACATTAAGACTCATATTAACCGCT LITVPLQIVEFYLILVAVTAVTSALFWRLLGASLVMLVFGFLGEAGILDATLGFVIGMAGWIYIIYEVFSGEASKLSAGSGNKGGQFAFNTLRLILTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTTCCACTTCAAATTGTAGAATTTTATTTAATTCTTGTCGCA---------GTA---ACTGCTGTTACTAGT---GCACTA------------------------------------TTTTGGAGA---TTGCTGGGTGCCTCTCTTGTAATGCTAGTTTTTGGATTTTTAGGGGAA---------GCA------------------GGA------ATT---------------------------------CTT------------------------------------------------------------------GATGCT------------------ACTCTCGGT---TTTGTGATCGGAATGGCAGGCTGGATATATATCATTTACGAAGTA---------------TTC------AGC---GGAGAAGCTTCTAAACTTTCAGCAGGA------AGT---GGAAACAAAGGTGGC---CAG---TTT---GCT---TTC---AAT---ACATTA---AGACTCATATTAACCGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILVA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--I-----------L----------------------DA------TLG-FVIGMAGWIYIIYEV-----F--S-GEASKLSAG--S-GNKGG-Q-F-A-F-N-TL-RLILTA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927687 [unk-euryarch-a] PRGD_OTU015_29775ac7d48803897d1178aa9a73586b gb|KJ927687| PRGD_OTU015_29775ac7d48803897d1178aa9a73586b, putative proteorhodopsin gene, partial cds. PRGD_OTU015_29775ac7d48803897d1178aa9a73586b, putative proteorhodopsin gene, partial cds. KJ927687 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTAATTACTGTTCCACTTCAAATTGTAGAATTTTATTTAATTCTTGTCGCGGTAACTGCTGTTACTAGTGCACTATTTTGGAGATTGCTGGGTGCCTCACTCGTAATGCTAGTTTTTGGATTTTTAGGAGAAGCAGGAATTCTTGATGCTACACTCGGTTTTGTGATCGGAATGGCAGGCTGGATATATATCATTTATGAAGTATTTAGCGGAGAAGCTTCTAAACTTTCAGCAGGAAGTGGAAACAAAGGTGGCCAGTTTGCTTTCAATACCTTAAGACTTATATTAACCGCT LITVPLQIVEFYLILVAVTAVTSALFWRLLGASLVMLVFGFLGEAGILDATLGFVIGMAGWIYIIYEVFSGEASKLSAGSGNKGGQFAFNTLRLILTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTTCCACTTCAAATTGTAGAATTTTATTTAATTCTTGTCGCG---------GTA---ACTGCTGTTACTAGT---GCACTA------------------------------------TTTTGGAGA---TTGCTGGGTGCCTCACTCGTAATGCTAGTTTTTGGATTTTTAGGAGAA---------GCA------------------GGA------ATT---------------------------------CTT------------------------------------------------------------------GATGCT------------------ACACTCGGT---TTTGTGATCGGAATGGCAGGCTGGATATATATCATTTATGAAGTA---------------TTT------AGC---GGAGAAGCTTCTAAACTTTCAGCAGGA------AGT---GGAAACAAAGGTGGC---CAG---TTT---GCT---TTC---AAT---ACCTTA---AGACTTATATTAACCGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILVA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--I-----------L----------------------DA------TLG-FVIGMAGWIYIIYEV-----F--S-GEASKLSAG--S-GNKGG-Q-F-A-F-N-TL-RLILTA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927719 [unk-euryarch-a] PRGD_OTU015_b3e62e066bdec002cc90bce6b3f94037 gb|KJ927719| PRGD_OTU015_b3e62e066bdec002cc90bce6b3f94037, putative proteorhodopsin gene, partial cds. PRGD_OTU015_b3e62e066bdec002cc90bce6b3f94037, putative proteorhodopsin gene, partial cds. KJ927719 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTAATTACTGTTCCACTTCAAATTGTAGAATTTTATTTAATTCTTGTCGCGGTAACTGCTGTTACTAGTGCACTATTTTGGAGATTGCTGGGTGCCTCTCTCGTAATGCTAGTTTTTGGATTTTTAGGAGAAGCAGGAATTCTTGATGCTACTCTCGGTTTTGTGATCGGAATGGCAGGCTGGATATATATCATTTACGAAGTATTTAGCGGAGAAGCTTCTAAACTTTCAGCAGGAAGTGGAAACAAAGGTGGCCAGTTCGCTTTCAATACCTTAAGACTTATATTAACCGCT LITVPLQIVEFYLILVAVTAVTSALFWRLLGASLVMLVFGFLGEAGILDATLGFVIGMAGWIYIIYEVFSGEASKLSAGSGNKGGQFAFNTLRLILTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTTCCACTTCAAATTGTAGAATTTTATTTAATTCTTGTCGCG---------GTA---ACTGCTGTTACTAGT---GCACTA------------------------------------TTTTGGAGA---TTGCTGGGTGCCTCTCTCGTAATGCTAGTTTTTGGATTTTTAGGAGAA---------GCA------------------GGA------ATT---------------------------------CTT------------------------------------------------------------------GATGCT------------------ACTCTCGGT---TTTGTGATCGGAATGGCAGGCTGGATATATATCATTTACGAAGTA---------------TTT------AGC---GGAGAAGCTTCTAAACTTTCAGCAGGA------AGT---GGAAACAAAGGTGGC---CAG---TTC---GCT---TTC---AAT---ACCTTA---AGACTTATATTAACCGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILVA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--I-----------L----------------------DA------TLG-FVIGMAGWIYIIYEV-----F--S-GEASKLSAG--S-GNKGG-Q-F-A-F-N-TL-RLILTA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927727 [unk-euryarch-a] PRGD_OTU015_d8f0cf35720a6674ed4d44572ef8f17e gb|KJ927727| PRGD_OTU015_d8f0cf35720a6674ed4d44572ef8f17e, putative proteorhodopsin gene, partial cds. PRGD_OTU015_d8f0cf35720a6674ed4d44572ef8f17e, putative proteorhodopsin gene, partial cds. KJ927727 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTAATTACTGTTCCACTTCAAATTGTAGAATTTTATTTAATTCTTGTCGCGGTAACTGCTGTTACTAGTGCACTATTTTGGAGATTGCTGGGTGCCTCTCTCGTAATGCTAGTTTTTGGATTTCTAGGAGAAGCAGGAATTCTTGATGCTACTCTCGGTTTTGTAATCGGAATGGCAGGCTGGATATATATCATTTACGAAGTATTTAGCGGAGAAGCTTCTAAACTTTCAGCAGGAAGTGGAAACAAAGGTGGCCAGTTCGCTTTCAATACTTTAAGACTTATATTAACCGCT LITVPLQIVEFYLILVAVTAVTSALFWRLLGASLVMLVFGFLGEAGILDATLGFVIGMAGWIYIIYEVFSGEASKLSAGSGNKGGQFAFNTLRLILTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTTCCACTTCAAATTGTAGAATTTTATTTAATTCTTGTCGCG---------GTA---ACTGCTGTTACTAGT---GCACTA------------------------------------TTTTGGAGA---TTGCTGGGTGCCTCTCTCGTAATGCTAGTTTTTGGATTTCTAGGAGAA---------GCA------------------GGA------ATT---------------------------------CTT------------------------------------------------------------------GATGCT------------------ACTCTCGGT---TTTGTAATCGGAATGGCAGGCTGGATATATATCATTTACGAAGTA---------------TTT------AGC---GGAGAAGCTTCTAAACTTTCAGCAGGA------AGT---GGAAACAAAGGTGGC---CAG---TTC---GCT---TTC---AAT---ACTTTA---AGACTTATATTAACCGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILVA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--I-----------L----------------------DA------TLG-FVIGMAGWIYIIYEV-----F--S-GEASKLSAG--S-GNKGG-Q-F-A-F-N-TL-RLILTA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927697 [unk-euryarch-a] PRGD_OTU015_3f488b958dd896b70cac577462c01022 gb|KJ927697| PRGD_OTU015_3f488b958dd896b70cac577462c01022, putative proteorhodopsin gene, partial cds. PRGD_OTU015_3f488b958dd896b70cac577462c01022, putative proteorhodopsin gene, partial cds. KJ927697 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTAATTACTGTACCACTTCAGATTGTAGAATTTTACTTAATCCTTGTAGCGGTAACTGCTGTTACAAGTGCATTATTCTGGAGATTGCTGGGTGCTTCTCTCGTAATGCTAGTTTTTGGATTTTTAGGAGAAGCAGGAATTCTCGATGCTACTCTAGGTTTTGTGATCGGAATGGCAGGCTGGATATATATCATTTACGAAGTATTTAGCGGAGAAGCTTCTAAACTTGCAGCAGGAAGTGGAAACAAAGGTGGTCAGTTTGCTTTCAATACATTAAGACTTATATTAACCGCT LITVPLQIVEFYLILVAVTAVTSALFWRLLGASLVMLVFGFLGEAGILDATLGFVIGMAGWIYIIYEVFSGEASKLAAGSGNKGGQFAFNTLRLILTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCACTTCAGATTGTAGAATTTTACTTAATCCTTGTAGCG---------GTA---ACTGCTGTTACAAGT---GCATTA------------------------------------TTCTGGAGA---TTGCTGGGTGCTTCTCTCGTAATGCTAGTTTTTGGATTTTTAGGAGAA---------GCA------------------GGA------ATT---------------------------------CTC------------------------------------------------------------------GATGCT------------------ACTCTAGGT---TTTGTGATCGGAATGGCAGGCTGGATATATATCATTTACGAAGTA---------------TTT------AGC---GGAGAAGCTTCTAAACTTGCAGCAGGA------AGT---GGAAACAAAGGTGGT---CAG---TTT---GCT---TTC---AAT---ACATTA---AGACTTATATTAACCGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILVA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--I-----------L----------------------DA------TLG-FVIGMAGWIYIIYEV-----F--S-GEASKLAAG--S-GNKGG-Q-F-A-F-N-TL-RLILTA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927692 [unk-euryarch-a] PRGD_OTU015_36db91c6d2a5c1912900b2efe3fe8185 gb|KJ927692| PRGD_OTU015_36db91c6d2a5c1912900b2efe3fe8185, putative proteorhodopsin gene, partial cds. PRGD_OTU015_36db91c6d2a5c1912900b2efe3fe8185, putative proteorhodopsin gene, partial cds. KJ927692 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTAATTACTGTACCACTTCAAATTGTAGAATTTTATTTAATTCTTGTCGCTGTGACTGCTGTTACTAGTGCACTATTTTGGAGATTGCTGGGTGCCTCCCTCGTAATGCTAGTTTTTGGATTTTTAGGAGAAGCTGGAATTCTCGATGCTACTTTGGGTTTCGTAATTGGAATGGCAGGCTGGATCTATATTATTTACGAAGTATTTAGTGGAGAAGCTTCTAAGCTCTCAGCAGGAAGTGGAAACAAAGGTGGTCAGTTTGCCTTTAATACATTAAGGCTAATACTTACCGCT LITVPLQIVEFYLILVAVTAVTSALFWRLLGASLVMLVFGFLGEAGILDATLGFVIGMAGWIYIIYEVFSGEASKLSAGSGNKGGQFAFNTLRLILTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCACTTCAAATTGTAGAATTTTATTTAATTCTTGTCGCT---------GTG---ACTGCTGTTACTAGT---GCACTA------------------------------------TTTTGGAGA---TTGCTGGGTGCCTCCCTCGTAATGCTAGTTTTTGGATTTTTAGGAGAA---------GCT------------------GGA------ATT---------------------------------CTC------------------------------------------------------------------GATGCT------------------ACTTTGGGT---TTCGTAATTGGAATGGCAGGCTGGATCTATATTATTTACGAAGTA---------------TTT------AGT---GGAGAAGCTTCTAAGCTCTCAGCAGGA------AGT---GGAAACAAAGGTGGT---CAG---TTT---GCC---TTT---AAT---ACATTA---AGGCTAATACTTACCGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILVA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--I-----------L----------------------DA------TLG-FVIGMAGWIYIIYEV-----F--S-GEASKLSAG--S-GNKGG-Q-F-A-F-N-TL-RLILTA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927682 [unk-euryarch-a] PRGD_OTU015_099912b9e50210dd19ca7bc2ba8ad391 gb|KJ927682| PRGD_OTU015_099912b9e50210dd19ca7bc2ba8ad391, putative proteorhodopsin gene, partial cds. PRGD_OTU015_099912b9e50210dd19ca7bc2ba8ad391, putative proteorhodopsin gene, partial cds. KJ927682 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAATTACGGTACCACTCCAGATTGTAGAATTTTATCTAATTCTTGTTGCAGTAACTGCTGTAACCAGTGCACTGTTCTGGAGATTGCTAGGTGCTTCCCTTGTAATGCTAGTATTTGGATTTTTAGGAGAAGCAGGAATTCTTGATGCTACTCTAGGTTTTGTAATCGGAATGGCTGGCTGGATCTACATTATCTATGAGGTATTTAGCGGAGAAGCTTCCAAGCTTGCAGCAGGAAGTGGAAACAAAGGTGGTCAGTTTGCTTTCAATACATTAAGGCTCATACTAACTGCT LITVPLQIVEFYLILVAVTAVTSALFWRLLGASLVMLVFGFLGEAGILDATLGFVIGMAGWIYIIYEVFSGEASKLAAGSGNKGGQFAFNTLRLILTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACGGTACCACTCCAGATTGTAGAATTTTATCTAATTCTTGTTGCA---------GTA---ACTGCTGTAACCAGT---GCACTG------------------------------------TTCTGGAGA---TTGCTAGGTGCTTCCCTTGTAATGCTAGTATTTGGATTTTTAGGAGAA---------GCA------------------GGA------ATT---------------------------------CTT------------------------------------------------------------------GATGCT------------------ACTCTAGGT---TTTGTAATCGGAATGGCTGGCTGGATCTACATTATCTATGAGGTA---------------TTT------AGC---GGAGAAGCTTCCAAGCTTGCAGCAGGA------AGT---GGAAACAAAGGTGGT---CAG---TTT---GCT---TTC---AAT---ACATTA---AGGCTCATACTAACTGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILVA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--I-----------L----------------------DA------TLG-FVIGMAGWIYIIYEV-----F--S-GEASKLAAG--S-GNKGG-Q-F-A-F-N-TL-RLILTA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927704 [unk-euryarch-a] PRGD_OTU015_65e4062d55456b793571f66351aa45db gb|KJ927704| PRGD_OTU015_65e4062d55456b793571f66351aa45db, putative proteorhodopsin gene, partial cds. PRGD_OTU015_65e4062d55456b793571f66351aa45db, putative proteorhodopsin gene, partial cds. KJ927704 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAATTACGGTTCCACTTCAGATTGTGGAGTTTTATCTAATTCTTGTTGCAGTAACTGCTGTAACCAGTGCGCTTTTCTGGAGATTGCTAGGTGCTTCCCTTGTAATGCTAGTATTTGGATTTTTAGGAGAAGCAGGAATTCTTGATGCTACACTAGGTTTTGTAATCGGTATGGCTGGCTGGATCTACATTATCTATGAGGTATTTAGCGGAGAAGCTTCCAAGCTTGCAGCAGGAAGTGGAAACAAAGGTGGTCAGTTTGCTTTCAATACATTAAGGCTCATACTAACTGCT LITVPLQIVEFYLILVAVTAVTSALFWRLLGASLVMLVFGFLGEAGILDATLGFVIGMAGWIYIIYEVFSGEASKLAAGSGNKGGQFAFNTLRLILTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACGGTTCCACTTCAGATTGTGGAGTTTTATCTAATTCTTGTTGCA---------GTA---ACTGCTGTAACCAGT---GCGCTT------------------------------------TTCTGGAGA---TTGCTAGGTGCTTCCCTTGTAATGCTAGTATTTGGATTTTTAGGAGAA---------GCA------------------GGA------ATT---------------------------------CTT------------------------------------------------------------------GATGCT------------------ACACTAGGT---TTTGTAATCGGTATGGCTGGCTGGATCTACATTATCTATGAGGTA---------------TTT------AGC---GGAGAAGCTTCCAAGCTTGCAGCAGGA------AGT---GGAAACAAAGGTGGT---CAG---TTT---GCT---TTC---AAT---ACATTA---AGGCTCATACTAACTGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILVA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--I-----------L----------------------DA------TLG-FVIGMAGWIYIIYEV-----F--S-GEASKLAAG--S-GNKGG-Q-F-A-F-N-TL-RLILTA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927700 [unk-euryarch-a] PRGD_OTU015_53649173e6645dbc12cd06df6100759b gb|KJ927700| PRGD_OTU015_53649173e6645dbc12cd06df6100759b, putative proteorhodopsin gene, partial cds. PRGD_OTU015_53649173e6645dbc12cd06df6100759b, putative proteorhodopsin gene, partial cds. KJ927700 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-14.48, 113.45) TTAATTACTGTACCACTTCAGATTGTAGAATTTTATCTAATTCTTGTTGCGGTAACTGCAGTTACCAGCGCACTTTTCTGGAGATTACTAGGTGCTTCCCTTGTTATGTTAGTTTTTGGATTTTTAGGCGAAGCTGGAATTCTTGATGCTACTTTAGGTTTTGTAATTGGAATGGCTGGCTGGATCTACATTATTTATGAGGTATTCAGTGGAGAAGCTTCCAAACTGGCAGCAGGAAGTGGAAACAAAGGAGGTCAGTTTGCCTTCAATACACTAAGACTAATATTAACTGCT LITVPLQIVEFYLILVAVTAVTSALFWRLLGASLVMLVFGFLGEAGILDATLGFVIGMAGWIYIIYEVFSGEASKLAAGSGNKGGQFAFNTLRLILTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCACTTCAGATTGTAGAATTTTATCTAATTCTTGTTGCG---------GTA---ACTGCAGTTACCAGC---GCACTT------------------------------------TTCTGGAGA---TTACTAGGTGCTTCCCTTGTTATGTTAGTTTTTGGATTTTTAGGCGAA---------GCT------------------GGA------ATT---------------------------------CTT------------------------------------------------------------------GATGCT------------------ACTTTAGGT---TTTGTAATTGGAATGGCTGGCTGGATCTACATTATTTATGAGGTA---------------TTC------AGT---GGAGAAGCTTCCAAACTGGCAGCAGGA------AGT---GGAAACAAAGGAGGT---CAG---TTT---GCC---TTC---AAT---ACACTA---AGACTAATATTAACTGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILVA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--I-----------L----------------------DA------TLG-FVIGMAGWIYIIYEV-----F--S-GEASKLAAG--S-GNKGG-Q-F-A-F-N-TL-RLILTA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927708 [unk-euryarch-a] PRGD_OTU015_72a04284282537b09f05393242d53ebe gb|KJ927708| PRGD_OTU015_72a04284282537b09f05393242d53ebe, putative proteorhodopsin gene, partial cds. PRGD_OTU015_72a04284282537b09f05393242d53ebe, putative proteorhodopsin gene, partial cds. KJ927708 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (72.0542, -130.8781), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTAATTACTGTACCACTTCAGATTGTAGAATTTTATCTAATTCTTGTTGCGGTAACTGCAGTTACCAGCGCACTTTTCTGGAGATTACTAGGTGCTTCTCTTGTTATGTTAGTTTTTGGATTTCTAGGCGAAGCTGGAATTCTTGATGCTACTTTAGGTTTTGTAATTGGAATGGCTGGCTGGATCTACATTATTTATGAGGTATTTAGTGGAGAAGCTTCCAAGCTGGCAGCAGGAAGTGGAAACAAAGGAGGTCAGTTTGCCTTCAATACACTAAGACTAATACTAACTGCT LITVPLQIVEFYLILVAVTAVTSALFWRLLGASLVMLVFGFLGEAGILDATLGFVIGMAGWIYIIYEVFSGEASKLAAGSGNKGGQFAFNTLRLILTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCACTTCAGATTGTAGAATTTTATCTAATTCTTGTTGCG---------GTA---ACTGCAGTTACCAGC---GCACTT------------------------------------TTCTGGAGA---TTACTAGGTGCTTCTCTTGTTATGTTAGTTTTTGGATTTCTAGGCGAA---------GCT------------------GGA------ATT---------------------------------CTT------------------------------------------------------------------GATGCT------------------ACTTTAGGT---TTTGTAATTGGAATGGCTGGCTGGATCTACATTATTTATGAGGTA---------------TTT------AGT---GGAGAAGCTTCCAAGCTGGCAGCAGGA------AGT---GGAAACAAAGGAGGT---CAG---TTT---GCC---TTC---AAT---ACACTA---AGACTAATACTAACTGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILVA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--I-----------L----------------------DA------TLG-FVIGMAGWIYIIYEV-----F--S-GEASKLAAG--S-GNKGG-Q-F-A-F-N-TL-RLILTA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927688 [unk-euryarch-a] PRGD_OTU015_2ac79875b3daeeb655b881253a4f94e0 gb|KJ927688| PRGD_OTU015_2ac79875b3daeeb655b881253a4f94e0, putative proteorhodopsin gene, partial cds. PRGD_OTU015_2ac79875b3daeeb655b881253a4f94e0, putative proteorhodopsin gene, partial cds. KJ927688 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTAATTACGGTACCACTGCAGATTGTAGAATTTTATTTAATTCTTGTTGCGGTAACCGCAGTTACTAGTGCACTATTCTGGAGATTATTAGGTGCTTCTCTCGTAATGTTAGTTTTTGGATTTTTAGGAGAAGCAGGCATTCTTGATGCTACTCTGGGTTTTGTGATTGGAATGGCTGGCTGGATTTACATCATTTATGAAGTATTCAGCGGAGAAGCTTCCAAGCTTGCAGCGGGAAGTGGAAACAAAGGTGGTCAGTTTGCTTTCAATACACTAAGACTTATACTAACCGCA LITVPLQIVEFYLILVAVTAVTSALFWRLLGASLVMLVFGFLGEAGILDATLGFVIGMAGWIYIIYEVFSGEASKLAAGSGNKGGQFAFNTLRLILTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACGGTACCACTGCAGATTGTAGAATTTTATTTAATTCTTGTTGCG---------GTA---ACCGCAGTTACTAGT---GCACTA------------------------------------TTCTGGAGA---TTATTAGGTGCTTCTCTCGTAATGTTAGTTTTTGGATTTTTAGGAGAA---------GCA------------------GGC------ATT---------------------------------CTT------------------------------------------------------------------GATGCT------------------ACTCTGGGT---TTTGTGATTGGAATGGCTGGCTGGATTTACATCATTTATGAAGTA---------------TTC------AGC---GGAGAAGCTTCCAAGCTTGCAGCGGGA------AGT---GGAAACAAAGGTGGT---CAG---TTT---GCT---TTC---AAT---ACACTA---AGACTTATACTAACCGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILVA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--I-----------L----------------------DA------TLG-FVIGMAGWIYIIYEV-----F--S-GEASKLAAG--S-GNKGG-Q-F-A-F-N-TL-RLILTA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927717 [unk-euryarch-a] PRGD_OTU015_a99253fcc5be0bd971788380ed05bb11 gb|KJ927717| PRGD_OTU015_a99253fcc5be0bd971788380ed05bb11, putative proteorhodopsin gene, partial cds. PRGD_OTU015_a99253fcc5be0bd971788380ed05bb11, putative proteorhodopsin gene, partial cds. KJ927717 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTAATTACGGTACCACTGCAGATTGTAGAATTTTATTTAATTCTTGTTGCGGTAACCGCAGTTACTAGTGCACTATTCTGGAGATTATTAGGTGCTTCTCTCGTAATGTTAGTTTTTGGATTTTTAGGAGAAGCAGGAATTCTTGATGCTACTCTGGGTTTTGTAGTTGGAATGGCTGGCTGGATCTACATCATCTATGAAGTATTCAGCGGAGAAGCTTCCAAGCTTGCAGCGGGAAGTGGAAACAAAGGCGGTCAGTTTGCTTTCAATACATTAAGACTCATACTAACTGCT LITVPLQIVEFYLILVAVTAVTSALFWRLLGASLVMLVFGFLGEAGILDATLGFVVGMAGWIYIIYEVFSGEASKLAAGSGNKGGQFAFNTLRLILTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACGGTACCACTGCAGATTGTAGAATTTTATTTAATTCTTGTTGCG---------GTA---ACCGCAGTTACTAGT---GCACTA------------------------------------TTCTGGAGA---TTATTAGGTGCTTCTCTCGTAATGTTAGTTTTTGGATTTTTAGGAGAA---------GCA------------------GGA------ATT---------------------------------CTT------------------------------------------------------------------GATGCT------------------ACTCTGGGT---TTTGTAGTTGGAATGGCTGGCTGGATCTACATCATCTATGAAGTA---------------TTC------AGC---GGAGAAGCTTCCAAGCTTGCAGCGGGA------AGT---GGAAACAAAGGCGGT---CAG---TTT---GCT---TTC---AAT---ACATTA---AGACTCATACTAACTGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILVA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--I-----------L----------------------DA------TLG-FVVGMAGWIYIIYEV-----F--S-GEASKLAAG--S-GNKGG-Q-F-A-F-N-TL-RLILTA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927714 [unk-euryarch-a] PRGD_OTU015_9d8b3203f2dd046e135bd7c4f494f5b0 gb|KJ927714| PRGD_OTU015_9d8b3203f2dd046e135bd7c4f494f5b0, putative proteorhodopsin gene, partial cds. PRGD_OTU015_9d8b3203f2dd046e135bd7c4f494f5b0, putative proteorhodopsin gene, partial cds. KJ927714 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTAATTACCGTACCGCTGCAGATTGTAGAATTTTACCTAATCCTTGTTGCAGTAACTGCTGTAACCAGTGCACTGTTCTGGAGATTATTAGGAGCTTCCCTTGTAATGCTAGTTTTTGGATTTTTAGGAGAGGCAGGAATTCTTGATGCCACACTGGGTTTTGTAATCGGTATGGCTGGCTGGATCTACATAATTTATGAAGTATTCAGCGGTGAGGCTTCCAAGCTCGCGGCAGGAAGTGGAAACAAAGGTGGTCAGTTTGCTTTCAATACACTAAGGCTCATACTAACCGCT LITVPLQIVEFYLILVAVTAVTSALFWRLLGASLVMLVFGFLGEAGILDATLGFVIGMAGWIYIIYEVFSGEASKLAAGSGNKGGQFAFNTLRLILTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACCGTACCGCTGCAGATTGTAGAATTTTACCTAATCCTTGTTGCA---------GTA---ACTGCTGTAACCAGT---GCACTG------------------------------------TTCTGGAGA---TTATTAGGAGCTTCCCTTGTAATGCTAGTTTTTGGATTTTTAGGAGAG---------GCA------------------GGA------ATT---------------------------------CTT------------------------------------------------------------------GATGCC------------------ACACTGGGT---TTTGTAATCGGTATGGCTGGCTGGATCTACATAATTTATGAAGTA---------------TTC------AGC---GGTGAGGCTTCCAAGCTCGCGGCAGGA------AGT---GGAAACAAAGGTGGT---CAG---TTT---GCT---TTC---AAT---ACACTA---AGGCTCATACTAACCGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILVA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--I-----------L----------------------DA------TLG-FVIGMAGWIYIIYEV-----F--S-GEASKLAAG--S-GNKGG-Q-F-A-F-N-TL-RLILTA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927686 [unk-euryarch-a] PRGD_OTU015_241e5181f5a34484e6055033077f7ee6 gb|KJ927686| PRGD_OTU015_241e5181f5a34484e6055033077f7ee6, putative proteorhodopsin gene, partial cds. PRGD_OTU015_241e5181f5a34484e6055033077f7ee6, putative proteorhodopsin gene, partial cds. KJ927686 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAATTACGGTACCACTTCAGATTGTAGAGTTTTATCTAATTCTTGTTGCAGTAACTGCTGTAACTAGTGCACTATTCTGGAGATTGCTAGGTGCTTCTCTCGTAATGCTAGTTTTTGGATTTCTAGGAGAGGCAGGAATTCTTGATGCTACTCTGGGTTTTGTAGTTGGTATGGCTGGCTGGATCTACATCATCTATGAGGTATTTAGCGGAGAAGCTTCCAAATTGGCAGCAGGAAGTGGAAACAAGGGTGGTCAGTTCGCTTTTAATACATTGAGACTTATATTAACCGCT LITVPLQIVEFYLILVAVTAVTSALFWRLLGASLVMLVFGFLGEAGILDATLGFVVGMAGWIYIIYEVFSGEASKLAAGSGNKGGQFAFNTLRLILTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACGGTACCACTTCAGATTGTAGAGTTTTATCTAATTCTTGTTGCA---------GTA---ACTGCTGTAACTAGT---GCACTA------------------------------------TTCTGGAGA---TTGCTAGGTGCTTCTCTCGTAATGCTAGTTTTTGGATTTCTAGGAGAG---------GCA------------------GGA------ATT---------------------------------CTT------------------------------------------------------------------GATGCT------------------ACTCTGGGT---TTTGTAGTTGGTATGGCTGGCTGGATCTACATCATCTATGAGGTA---------------TTT------AGC---GGAGAAGCTTCCAAATTGGCAGCAGGA------AGT---GGAAACAAGGGTGGT---CAG---TTC---GCT---TTT---AAT---ACATTG---AGACTTATATTAACCGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILVA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--I-----------L----------------------DA------TLG-FVVGMAGWIYIIYEV-----F--S-GEASKLAAG--S-GNKGG-Q-F-A-F-N-TL-RLILTA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927722 [unk-euryarch-a] PRGD_OTU015_cc17b0ea7df95c0afe9844ae47f30e0e gb|KJ927722| PRGD_OTU015_cc17b0ea7df95c0afe9844ae47f30e0e, putative proteorhodopsin gene, partial cds. PRGD_OTU015_cc17b0ea7df95c0afe9844ae47f30e0e, putative proteorhodopsin gene, partial cds. KJ927722 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAATTACGGTACCACTTCAGATTGTAGAGTTTTATCTAATTCTTGTTGCAGTAACTGCTGTAACCAGTGCATTATTCTGGAGATTGCTAGGTGCTTCTCTCGTAATGCTAGTTTTTGGATTTTTAGGAGAGGCAGGAATTCTTGATGCTACTCTGGGTTTTGTAGTTGGTATGGCTGGCTGGATCTACATCATCTATGAGGTATTTAGCGGAGAAGCTTCCAAATTGGCAGCAGGAAGTGGAAACAAGGGTGGTCAGTTCGCTTTTAATACATTGAGACTTATATTAACCGCT LITVPLQIVEFYLILVAVTAVTSALFWRLLGASLVMLVFGFLGEAGILDATLGFVVGMAGWIYIIYEVFSGEASKLAAGSGNKGGQFAFNTLRLILTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACGGTACCACTTCAGATTGTAGAGTTTTATCTAATTCTTGTTGCA---------GTA---ACTGCTGTAACCAGT---GCATTA------------------------------------TTCTGGAGA---TTGCTAGGTGCTTCTCTCGTAATGCTAGTTTTTGGATTTTTAGGAGAG---------GCA------------------GGA------ATT---------------------------------CTT------------------------------------------------------------------GATGCT------------------ACTCTGGGT---TTTGTAGTTGGTATGGCTGGCTGGATCTACATCATCTATGAGGTA---------------TTT------AGC---GGAGAAGCTTCCAAATTGGCAGCAGGA------AGT---GGAAACAAGGGTGGT---CAG---TTC---GCT---TTT---AAT---ACATTG---AGACTTATATTAACCGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILVA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--I-----------L----------------------DA------TLG-FVVGMAGWIYIIYEV-----F--S-GEASKLAAG--S-GNKGG-Q-F-A-F-N-TL-RLILTA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927684 [unk-euryarch-a] PRGD_OTU015_1d2af4e018eb3094f1563c989ff15dd1 gb|KJ927684| PRGD_OTU015_1d2af4e018eb3094f1563c989ff15dd1, putative proteorhodopsin gene, partial cds. PRGD_OTU015_1d2af4e018eb3094f1563c989ff15dd1, putative proteorhodopsin gene, partial cds. KJ927684 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAATTACGGTACCACTTCAGATCGTAGAATTTTATCTGATTCTTGTTGCAGTAACTGCTGTAACAAGTGCACTATTCTGGAGATTGCTAGGTGCTTCTCTTGTAATGCTAGTTTTTGGATTTTTAGGAGAGGCAGGAATTCTTGATGCTACATTGGGTTTTGTAGTTGGAATGGCTGGCTGGATCTACATCATCTATGAAGTATTTAGTGGAGAAGCTTCTAAGTTGGCAGCAGGAAGTGGAAACAAGGGTGGTCAGTTCGCTTTCAATACATTAAGACTCATACTAACCGCT LITVPLQIVEFYLILVAVTAVTSALFWRLLGASLVMLVFGFLGEAGILDATLGFVVGMAGWIYIIYEVFSGEASKLAAGSGNKGGQFAFNTLRLILTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACGGTACCACTTCAGATCGTAGAATTTTATCTGATTCTTGTTGCA---------GTA---ACTGCTGTAACAAGT---GCACTA------------------------------------TTCTGGAGA---TTGCTAGGTGCTTCTCTTGTAATGCTAGTTTTTGGATTTTTAGGAGAG---------GCA------------------GGA------ATT---------------------------------CTT------------------------------------------------------------------GATGCT------------------ACATTGGGT---TTTGTAGTTGGAATGGCTGGCTGGATCTACATCATCTATGAAGTA---------------TTT------AGT---GGAGAAGCTTCTAAGTTGGCAGCAGGA------AGT---GGAAACAAGGGTGGT---CAG---TTC---GCT---TTC---AAT---ACATTA---AGACTCATACTAACCGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILVA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--I-----------L----------------------DA------TLG-FVVGMAGWIYIIYEV-----F--S-GEASKLAAG--S-GNKGG-Q-F-A-F-N-TL-RLILTA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927721 [unk-euryarch-a] PRGD_OTU015_c42d2cfa166d2e06ccddf6527a26d518 gb|KJ927721| PRGD_OTU015_c42d2cfa166d2e06ccddf6527a26d518, putative proteorhodopsin gene, partial cds. PRGD_OTU015_c42d2cfa166d2e06ccddf6527a26d518, putative proteorhodopsin gene, partial cds. KJ927721 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATTACGGTTCCACTGCAGATTGTAGAGTTTTATCTGATTCTTGTTGCGGTAACTGCTGTTACTAGTGCATTATTCTGGAGATTGCTAGGTGCTTCCCTTGTAATGTTAGTCTTTGGATTTCTAGGAGAAGCAGGAATTCTAGATGCTACCCTGGGTTTTGTAATTGGAATGGCTGGATGGATCTACATCATTTATGAAGTTTTCAGTGGTGAGGCTTCCAAGTTGGCAGCAGGAAGTGGAAACAAAGGTGGTCAATTTGCTTTCAATACATTAAGACTTATTCTAACCGCT LITVPLQIVEFYLILVAVTAVTSALFWRLLGASLVMLVFGFLGEAGILDATLGFVIGMAGWIYIIYEVFSGEASKLAAGSGNKGGQFAFNTLRLILTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACGGTTCCACTGCAGATTGTAGAGTTTTATCTGATTCTTGTTGCG---------GTA---ACTGCTGTTACTAGT---GCATTA------------------------------------TTCTGGAGA---TTGCTAGGTGCTTCCCTTGTAATGTTAGTCTTTGGATTTCTAGGAGAA---------GCA------------------GGA------ATT---------------------------------CTA------------------------------------------------------------------GATGCT------------------ACCCTGGGT---TTTGTAATTGGAATGGCTGGATGGATCTACATCATTTATGAAGTT---------------TTC------AGT---GGTGAGGCTTCCAAGTTGGCAGCAGGA------AGT---GGAAACAAAGGTGGT---CAA---TTT---GCT---TTC---AAT---ACATTA---AGACTTATTCTAACCGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILVA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--I-----------L----------------------DA------TLG-FVIGMAGWIYIIYEV-----F--S-GEASKLAAG--S-GNKGG-Q-F-A-F-N-TL-RLILTA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927685 [unk-euryarch-a] PRGD_OTU015_217c1237314295ba1d2ac7b402fd0205 gb|KJ927685| PRGD_OTU015_217c1237314295ba1d2ac7b402fd0205, putative proteorhodopsin gene, partial cds. PRGD_OTU015_217c1237314295ba1d2ac7b402fd0205, putative proteorhodopsin gene, partial cds. KJ927685 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACCGTACCACTTCAGATTGTAGAGTTTTATCTGATTCTTGTTGCGGTAACTGCCGTTACCAGCGCATTATTTTGGAGATTGCTAGGTGCGTCCCTTGTAATGCTAGTTTTCGGATTCTTAGGAGAGGCTGGAATTATCGATGCAACTCTGGGTTTTGTATTTGGAATGGCTGGATGGATCTACATCATTTATGAAGTGTTTAGTGGAGAAGCCTCCAAGCTGGCCGCAGGTAGTGGAAATAAGGGTGGTCAGTTTGCTTTTAATACATTGAGACTTATACTAACTGTT LITVPLQIVEFYLILVAVTAVTSALFWRLLGASLVMLVFGFLGEAGIIDATLGFVFGMAGWIYIIYEVFSGEASKLAAGSGNKGGQFAFNTLRLILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACCGTACCACTTCAGATTGTAGAGTTTTATCTGATTCTTGTTGCG---------GTA---ACTGCCGTTACCAGC---GCATTA------------------------------------TTTTGGAGA---TTGCTAGGTGCGTCCCTTGTAATGCTAGTTTTCGGATTCTTAGGAGAG---------GCT------------------GGA------ATT---------------------------------ATC------------------------------------------------------------------GATGCA------------------ACTCTGGGT---TTTGTATTTGGAATGGCTGGATGGATCTACATCATTTATGAAGTG---------------TTT------AGT---GGAGAAGCCTCCAAGCTGGCCGCAGGT------AGT---GGAAATAAGGGTGGT---CAG---TTT---GCT---TTT---AAT---ACATTG---AGACTTATACTAACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILVA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--I-----------I----------------------DA------TLG-FVFGMAGWIYIIYEV-----F--S-GEASKLAAG--S-GNKGG-Q-F-A-F-N-TL-RLILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927706 [unk-euryarch-a] PRGD_OTU015_6c029a8a58c40ec29dc186018fbfdfee gb|KJ927706| PRGD_OTU015_6c029a8a58c40ec29dc186018fbfdfee, putative proteorhodopsin gene, partial cds. PRGD_OTU015_6c029a8a58c40ec29dc186018fbfdfee, putative proteorhodopsin gene, partial cds. KJ927706 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) TTAATTACCGTACCACTTCAGATTGTAGAGTTTTATCTTATTCTTGTTGCGGTAACTGCCGTTACCAGCGCATTATTTTGGAGATTGCTAGGTGCGTCCCTTGTAATGCTAGTTTTCGGATTCTTAGGAGAGGCTGGAATTATCGATGCAACTCTGGGTTTTGTATTTGGAATGGCTGGATGGATCTACATCATTTATGAAGTGTTTAGTGGAGAAGCCTCCAAGCTGGCAGCAGGTAGCGGAAATAAGGGTGGTCAGTTTGCTTTCAATACATTGAGACTCATACTAATCGCT LITVPLQIVEFYLILVAVTAVTSALFWRLLGASLVMLVFGFLGEAGIIDATLGFVFGMAGWIYIIYEVFSGEASKLAAGSGNKGGQFAFNTLRLILIA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACCGTACCACTTCAGATTGTAGAGTTTTATCTTATTCTTGTTGCG---------GTA---ACTGCCGTTACCAGC---GCATTA------------------------------------TTTTGGAGA---TTGCTAGGTGCGTCCCTTGTAATGCTAGTTTTCGGATTCTTAGGAGAG---------GCT------------------GGA------ATT---------------------------------ATC------------------------------------------------------------------GATGCA------------------ACTCTGGGT---TTTGTATTTGGAATGGCTGGATGGATCTACATCATTTATGAAGTG---------------TTT------AGT---GGAGAAGCCTCCAAGCTGGCAGCAGGT------AGC---GGAAATAAGGGTGGT---CAG---TTT---GCT---TTC---AAT---ACATTG---AGACTCATACTAATCGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILVA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--I-----------I----------------------DA------TLG-FVFGMAGWIYIIYEV-----F--S-GEASKLAAG--S-GNKGG-Q-F-A-F-N-TL-RLILIA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927696 [unk-euryarch-a] PRGD_OTU015_3cea2d2e5374d738e2ba60c51dd2eb9b gb|KJ927696| PRGD_OTU015_3cea2d2e5374d738e2ba60c51dd2eb9b, putative proteorhodopsin gene, partial cds. PRGD_OTU015_3cea2d2e5374d738e2ba60c51dd2eb9b, putative proteorhodopsin gene, partial cds. KJ927696 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTAATTACAGTACCACTTCAGATTGTAGAGTTCTACCTGATTTTAGCTGCTGTAACCGCCGTTACTAGCGCCTTATTCTGGAGACTGTTGGGCGCATCTCTTGTAATGTTGGTTTTTGGATTTCTTGGAGAGGCGGGTCTTCTTGACGCAACCTTAGGATTTGTTGTCGGAGTTGCTGCTTGGGTTTACATAATATATGAAGTATTTAGTGGAGAAGCCTCCAAACTAGCTGCAGGTAGCGGAAATAAAGGTGGTCAGTTTGCCTTTAACACACTAAGACTCATCCTTACAATA LITVPLQIVEFYLILAAVTAVTSALFWRLLGASLVMLVFGFLGEAGLLDATLGFVVGVAAWVYIIYEVFSGEASKLAAGSGNKGGQFAFNTLRLILTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTACCACTTCAGATTGTAGAGTTCTACCTGATTTTAGCTGCT---------GTA---ACCGCCGTTACTAGC---GCCTTA------------------------------------TTCTGGAGA---CTGTTGGGCGCATCTCTTGTAATGTTGGTTTTTGGATTTCTTGGAGAG---------GCG------------------GGT------CTT---------------------------------CTT------------------------------------------------------------------GACGCA------------------ACCTTAGGA---TTTGTTGTCGGAGTTGCTGCTTGGGTTTACATAATATATGAAGTA---------------TTT------AGT---GGAGAAGCCTCCAAACTAGCTGCAGGT------AGC---GGAAATAAAGGTGGT---CAG---TTT---GCC---TTT---AAC---ACACTA---AGACTCATCCTTACAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--L-----------L----------------------DA------TLG-FVVGVAAWVYIIYEV-----F--S-GEASKLAAG--S-GNKGG-Q-F-A-F-N-TL-RLILTI-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927698 [unk-euryarch-a] PRGD_OTU015_4ebca056b30f58f9e8ade9cf9893b2b8 gb|KJ927698| PRGD_OTU015_4ebca056b30f58f9e8ade9cf9893b2b8, putative proteorhodopsin gene, partial cds. PRGD_OTU015_4ebca056b30f58f9e8ade9cf9893b2b8, putative proteorhodopsin gene, partial cds. KJ927698 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -33.28, 45.35) TTAATCACTGTACCACTTCAGATTGTAGAGTTCTACCTGATTTTAGCTGCTGTAACCGCCGTTACTAGCGCCTTATTCTGGAGACTGTTGGGCGCATCTCTTGTAATGTTGGTTTTTGGATTTCTTGGAGAGGCGGGTCTTCTTGACGCAACCTTAGGATTTGTTGTCGGAGTTGCTGCTTGGGTTTACATAATATATGAAGTATTTAGTGGAGAAGCTTCCAAACTAGCTGCAGGTAGTGGAAATAAAGGCGGTCAGTTTGCTTTTAACACACTAAGACTTATCCTCACAATA LITVPLQIVEFYLILAAVTAVTSALFWRLLGASLVMLVFGFLGEAGLLDATLGFVVGVAAWVYIIYEVFSGEASKLAAGSGNKGGQFAFNTLRLILTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCACTTCAGATTGTAGAGTTCTACCTGATTTTAGCTGCT---------GTA---ACCGCCGTTACTAGC---GCCTTA------------------------------------TTCTGGAGA---CTGTTGGGCGCATCTCTTGTAATGTTGGTTTTTGGATTTCTTGGAGAG---------GCG------------------GGT------CTT---------------------------------CTT------------------------------------------------------------------GACGCA------------------ACCTTAGGA---TTTGTTGTCGGAGTTGCTGCTTGGGTTTACATAATATATGAAGTA---------------TTT------AGT---GGAGAAGCTTCCAAACTAGCTGCAGGT------AGT---GGAAATAAAGGCGGT---CAG---TTT---GCT---TTT---AAC---ACACTA---AGACTTATCCTCACAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--L-----------L----------------------DA------TLG-FVVGVAAWVYIIYEV-----F--S-GEASKLAAG--S-GNKGG-Q-F-A-F-N-TL-RLILTI-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927705 [unk-euryarch-a] PRGD_OTU015_6a6b6b88287bda41f218420d19aea9ea gb|KJ927705| PRGD_OTU015_6a6b6b88287bda41f218420d19aea9ea, putative proteorhodopsin gene, partial cds. PRGD_OTU015_6a6b6b88287bda41f218420d19aea9ea, putative proteorhodopsin gene, partial cds. KJ927705 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATTACTGTACCACTTCAGATTGTAGAGTTCTACCTGATATTGGCTGCTGTAACTGCCGTTACTAGCGCCTTATTCTGGAGACTGCTGGGTGCATCTCTTGTAATGTTGGTTTTTGGATTTCTTGGAGAGGCGGGACTTCTTGACGCAACCCTAGGATTTGTTGTCGGAGTTGCTGCTTGGGTTTACATAATATATGAAGTGTTTAGTGGAGAAGCTTCCAAACTAGCTGCAGGTAGTGGAAATAAAGGCGGTCAGTTTGCCTTTAACACACTAAGACTCATCCTTACAATA LITVPLQIVEFYLILAAVTAVTSALFWRLLGASLVMLVFGFLGEAGLLDATLGFVVGVAAWVYIIYEVFSGEASKLAAGSGNKGGQFAFNTLRLILTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCACTTCAGATTGTAGAGTTCTACCTGATATTGGCTGCT---------GTA---ACTGCCGTTACTAGC---GCCTTA------------------------------------TTCTGGAGA---CTGCTGGGTGCATCTCTTGTAATGTTGGTTTTTGGATTTCTTGGAGAG---------GCG------------------GGA------CTT---------------------------------CTT------------------------------------------------------------------GACGCA------------------ACCCTAGGA---TTTGTTGTCGGAGTTGCTGCTTGGGTTTACATAATATATGAAGTG---------------TTT------AGT---GGAGAAGCTTCCAAACTAGCTGCAGGT------AGT---GGAAATAAAGGCGGT---CAG---TTT---GCC---TTT---AAC---ACACTA---AGACTCATCCTTACAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--L-----------L----------------------DA------TLG-FVVGVAAWVYIIYEV-----F--S-GEASKLAAG--S-GNKGG-Q-F-A-F-N-TL-RLILTI-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927725 [unk-euryarch-a] PRGD_OTU015_d35c1ccfefc003bc7d1c459e360441bc gb|KJ927725| PRGD_OTU015_d35c1ccfefc003bc7d1c459e360441bc, putative proteorhodopsin gene, partial cds. PRGD_OTU015_d35c1ccfefc003bc7d1c459e360441bc, putative proteorhodopsin gene, partial cds. KJ927725 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) TTAATTACTGTACCACTTCAGATTGTAGAATTTTACCTGATATTAGCTGCTGTAACTGCCGTTACTAGCGCCTTATTCTGGAGACTGCTGGGTGCATCTCTTGTAATGTTGGTTTTTGGATTTCTTGGAGAAGCCGGTCTCCTTGACGCAACCTTAGGATTTGTTGTCGGAGTTGCTGCTTGGGGTTACGTAATATATGAAGTGTTTAGTGGAGAAGCTTCCAAGCTAGCCGCAGGTAGTGGAAATAAAGGCGGTCAGTTTGCCTTCAACACACTAAGACTTATCCTTACAATA LITVPLQIVEFYLILAAVTAVTSALFWRLLGASLVMLVFGFLGEAGLLDATLGFVVGVAAWGYVIYEVFSGEASKLAAGSGNKGGQFAFNTLRLILTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCACTTCAGATTGTAGAATTTTACCTGATATTAGCTGCT---------GTA---ACTGCCGTTACTAGC---GCCTTA------------------------------------TTCTGGAGA---CTGCTGGGTGCATCTCTTGTAATGTTGGTTTTTGGATTTCTTGGAGAA---------GCC------------------GGT------CTC---------------------------------CTT------------------------------------------------------------------GACGCA------------------ACCTTAGGA---TTTGTTGTCGGAGTTGCTGCTTGGGGTTACGTAATATATGAAGTG---------------TTT------AGT---GGAGAAGCTTCCAAGCTAGCCGCAGGT------AGT---GGAAATAAAGGCGGT---CAG---TTT---GCC---TTC---AAC---ACACTA---AGACTTATCCTTACAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--L-----------L----------------------DA------TLG-FVVGVAAWGYVIYEV-----F--S-GEASKLAAG--S-GNKGG-Q-F-A-F-N-TL-RLILTI-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927710 [unk-euryarch-a] PRGD_OTU015_81b641a50e0200e129f7bf259332ad9e gb|KJ927710| PRGD_OTU015_81b641a50e0200e129f7bf259332ad9e, putative proteorhodopsin gene, partial cds. PRGD_OTU015_81b641a50e0200e129f7bf259332ad9e, putative proteorhodopsin gene, partial cds. KJ927710 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -33.28, 45.35) TTAATTACTGTCCCACTTCAGATTGTAGAGTTTTACCTGATATTAGCTGCTGTAACTGCTGTTACTAGCGCCTTATTCTGGAGACTGTTGGGCGCATCTCTTGTAATGTTGGTTTTCGGATTTCTTGGAGAGGCTGGTCTTCTTGATGCAACCTTAGGATTTGTTGTCGGAGTTGCAGCTTGGGTTTACATTATATATGAAGTATTTAGTGGAGAAGCTTCCAAACTAGCTGCAGGTAGTGGAAATAAGGGCGGTCAGTTTGCCTTTAACACGCTAAGACTCATCCTTACAATA LITVPLQIVEFYLILAAVTAVTSALFWRLLGASLVMLVFGFLGEAGLLDATLGFVVGVAAWVYIIYEVFSGEASKLAAGSGNKGGQFAFNTLRLILTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTCCCACTTCAGATTGTAGAGTTTTACCTGATATTAGCTGCT---------GTA---ACTGCTGTTACTAGC---GCCTTA------------------------------------TTCTGGAGA---CTGTTGGGCGCATCTCTTGTAATGTTGGTTTTCGGATTTCTTGGAGAG---------GCT------------------GGT------CTT---------------------------------CTT------------------------------------------------------------------GATGCA------------------ACCTTAGGA---TTTGTTGTCGGAGTTGCAGCTTGGGTTTACATTATATATGAAGTA---------------TTT------AGT---GGAGAAGCTTCCAAACTAGCTGCAGGT------AGT---GGAAATAAGGGCGGT---CAG---TTT---GCC---TTT---AAC---ACGCTA---AGACTCATCCTTACAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--L-----------L----------------------DA------TLG-FVVGVAAWVYIIYEV-----F--S-GEASKLAAG--S-GNKGG-Q-F-A-F-N-TL-RLILTI-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927715 [unk-euryarch-a] PRGD_OTU015_a1baa923b34c1417e44674a8bd2e1791 gb|KJ927715| PRGD_OTU015_a1baa923b34c1417e44674a8bd2e1791, putative proteorhodopsin gene, partial cds. PRGD_OTU015_a1baa923b34c1417e44674a8bd2e1791, putative proteorhodopsin gene, partial cds. KJ927715 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419) CTAATTACTGTACCACTACAGATTGTAGAGTTTTATCTGATACTAGCTGCTGTAACTGCCGTGACTAGTGGATTATTTTGGAGACTGCTGGGAGCATCACTTGTGATGTTGGTCGCTGGATTCTTAGGGGAAGCTGGAATTATAGATTCTCCAGCAATTGGGTTTGTTGTTGGAATGGCTGCATGGATATACATTATCTATGAGGTGTTTAGTGGAGAAGCTTCCAAACTAGCAGCAGGTAGTGGAAACAAGGGTGGACAGTTCGCCTTTAACACACTAAGGCTCATACTTACCGTT LITVPLQIVEFYLILAAVTAVTSGLFWRLLGASLVMLVAGFLGEAGIIDSPAIGFVVGMAAWIYIIYEVFSGEASKLAAGSGNKGGQFAFNTLRLILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTACCACTACAGATTGTAGAGTTTTATCTGATACTAGCTGCT---------GTA---ACTGCCGTGACTAGT---GGATTA------------------------------------TTTTGGAGA---CTGCTGGGAGCATCACTTGTGATGTTGGTCGCTGGATTCTTAGGGGAA---------GCT------------------GGA------ATT---------------------------------ATA------------------------------------------------------------------GATTCT------CCA---------GCAATTGGG---TTTGTTGTTGGAATGGCTGCATGGATATACATTATCTATGAGGTG---------------TTT------AGT---GGAGAAGCTTCCAAACTAGCAGCAGGT------AGT---GGAAACAAGGGTGGA---CAG---TTC---GCC---TTT---AAC---ACACTA---AGGCTCATACTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVTS-GL------------FWR-LLGASLVMLVAGFLGE---A------G--I-----------I----------------------DS--P---AIG-FVVGMAAWIYIIYEV-----F--S-GEASKLAAG--S-GNKGG-Q-F-A-F-N-TL-RLILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927726 [unk-euryarch-a] PRGD_OTU015_d841f8ef1a81c7031162ceee5837ed21 gb|KJ927726| PRGD_OTU015_d841f8ef1a81c7031162ceee5837ed21, putative proteorhodopsin gene, partial cds. PRGD_OTU015_d841f8ef1a81c7031162ceee5837ed21, putative proteorhodopsin gene, partial cds. KJ927726 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (72.0542, -130.8781), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTAATTACTGTACCACTACAGATTGTAGAGTTTTATCTGATACTAGCCGCTGTAACTGCCGTGACTAGTGGATTATTTTGGAGACTGCTGGGAGCATCACTTGTGATGTTGGTCGCTGGATTTATAGGGGAAGCTGGAATTATAGATTCTCCGGCAATTGGGTTTGTTGTTGGAATGGCTGCATGGATATACATTATCTATGAGGTGTTTAGTGGAGAAGCTTCCAAACTAGCAGCAGGTAGTGGAAACAAGGGTGGACAGTTCGCCTTTAACACACTAAGGCTCATACTTACCGTT LITVPLQIVEFYLILAAVTAVTSGLFWRLLGASLVMLVAGFIGEAGIIDSPAIGFVVGMAAWIYIIYEVFSGEASKLAAGSGNKGGQFAFNTLRLILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTACCACTACAGATTGTAGAGTTTTATCTGATACTAGCCGCT---------GTA---ACTGCCGTGACTAGT---GGATTA------------------------------------TTTTGGAGA---CTGCTGGGAGCATCACTTGTGATGTTGGTCGCTGGATTTATAGGGGAA---------GCT------------------GGA------ATT---------------------------------ATA------------------------------------------------------------------GATTCT------CCG---------GCAATTGGG---TTTGTTGTTGGAATGGCTGCATGGATATACATTATCTATGAGGTG---------------TTT------AGT---GGAGAAGCTTCCAAACTAGCAGCAGGT------AGT---GGAAACAAGGGTGGA---CAG---TTC---GCC---TTT---AAC---ACACTA---AGGCTCATACTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVTS-GL------------FWR-LLGASLVMLVAGFIGE---A------G--I-----------I----------------------DS--P---AIG-FVVGMAAWIYIIYEV-----F--S-GEASKLAAG--S-GNKGG-Q-F-A-F-N-TL-RLILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927730 [unk-euryarch-a] PRGD_OTU015_e9dc72746f25d646d2a5b1a4f04cf7c0 gb|KJ927730| PRGD_OTU015_e9dc72746f25d646d2a5b1a4f04cf7c0, putative proteorhodopsin gene, partial cds. PRGD_OTU015_e9dc72746f25d646d2a5b1a4f04cf7c0, putative proteorhodopsin gene, partial cds. KJ927730 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), Indian Ocean (-35.05, 23.73; -33.28, 45.35) TTAATTACGGTACCACTACAGATTGTAGAGTTTTATCTGATACTAGCTGCTGTAACTGCCGTGACTGGTGGATTATTCTGGAGACTGCTGGGAGCATCACTTGTGATGTTGGTCGCTGGATTCTTAGGGGAAGCTGGAATTATAGATTCTCCGGCAATTGGGTTTGTTGTTGGAATGGCTGCATGGATATACATTATCTATGAGGTGTTTAGTGGAGAAGCTTCCAAACTAGCAGCAGGTAGTGGAAACAAGGGTGGACAGTTCGCTTTTAACACACTAAGGCTCATACTTACCGTT LITVPLQIVEFYLILAAVTAVTGGLFWRLLGASLVMLVAGFLGEAGIIDSPAIGFVVGMAAWIYIIYEVFSGEASKLAAGSGNKGGQFAFNTLRLILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACGGTACCACTACAGATTGTAGAGTTTTATCTGATACTAGCTGCT---------GTA---ACTGCCGTGACTGGT---GGATTA------------------------------------TTCTGGAGA---CTGCTGGGAGCATCACTTGTGATGTTGGTCGCTGGATTCTTAGGGGAA---------GCT------------------GGA------ATT---------------------------------ATA------------------------------------------------------------------GATTCT------CCG---------GCAATTGGG---TTTGTTGTTGGAATGGCTGCATGGATATACATTATCTATGAGGTG---------------TTT------AGT---GGAGAAGCTTCCAAACTAGCAGCAGGT------AGT---GGAAACAAGGGTGGA---CAG---TTC---GCT---TTT---AAC---ACACTA---AGGCTCATACTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVTG-GL------------FWR-LLGASLVMLVAGFLGE---A------G--I-----------I----------------------DS--P---AIG-FVVGMAAWIYIIYEV-----F--S-GEASKLAAG--S-GNKGG-Q-F-A-F-N-TL-RLILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927690 [unk-euryarch-a] PRGD_OTU015_2bd7b8da74f950a335d7c2819fe4e007 gb|KJ927690| PRGD_OTU015_2bd7b8da74f950a335d7c2819fe4e007, putative proteorhodopsin gene, partial cds. PRGD_OTU015_2bd7b8da74f950a335d7c2819fe4e007, putative proteorhodopsin gene, partial cds. KJ927690 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097), Arctic Ocean-Pacific side (72.0542, -130.8781), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTAATTACTGTACCACTACAGATCGTAGAGTTTTATCTGATACTAGCTGCTGTAACTGCCGTGACTAGTGGATTATTCTGGAGACTGCTGGGAGCATCACTTGTGATGTTGGTCGCTGGATTCTTAGGTGAAGCTGGAATTATAGATTCTCCTGAAATTGGGTTTGTTGTTGGAATGGCTGCATGGATATACATTATCTATGAGGTGTTTAGTGGAGAAGCTTCCAAACTAGCAGCAGGTAGTGGAAACAAAGGTGGACAGTTCGCCTTTAACACACTAAGGCTCATACTTACCGTT LITVPLQIVEFYLILAAVTAVTSGLFWRLLGASLVMLVAGFLGEAGIIDSPEIGFVVGMAAWIYIIYEVFSGEASKLAAGSGNKGGQFAFNTLRLILTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTACCACTACAGATCGTAGAGTTTTATCTGATACTAGCTGCT---------GTA---ACTGCCGTGACTAGT---GGATTA------------------------------------TTCTGGAGA---CTGCTGGGAGCATCACTTGTGATGTTGGTCGCTGGATTCTTAGGTGAA---------GCT------------------GGA------ATT---------------------------------ATA------------------------------------------------------------------GATTCT------CCT---------GAAATTGGG---TTTGTTGTTGGAATGGCTGCATGGATATACATTATCTATGAGGTG---------------TTT------AGT---GGAGAAGCTTCCAAACTAGCAGCAGGT------AGT---GGAAACAAAGGTGGA---CAG---TTC---GCC---TTT---AAC---ACACTA---AGGCTCATACTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVTS-GL------------FWR-LLGASLVMLVAGFLGE---A------G--I-----------I----------------------DS--P---EIG-FVVGMAAWIYIIYEV-----F--S-GEASKLAAG--S-GNKGG-Q-F-A-F-N-TL-RLILTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927681 [unk-euryarch-a] PRGD_OTU015_07c5f17e464c92e86e7a18717aaed966 gb|KJ927681| PRGD_OTU015_07c5f17e464c92e86e7a18717aaed966, putative proteorhodopsin gene, partial cds. PRGD_OTU015_07c5f17e464c92e86e7a18717aaed966, putative proteorhodopsin gene, partial cds. KJ927681 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATTACCGTACCATTACAGATCGTAGAATTTTACCTTATACTTGCAGCCGTAACCGCTGTGACCAGTGGCTTATTTTGGAGATTGCTAGGAGCATCACTTGTAATGCTCGTATTTGGATTCTTAGGAGAAGCAGGACTGTTGAGTGCGACTGTTGGATTTGCTGTTGGAATGGCTGCATGGATCTACATAATCTATGAAGTTTTCAGTGGAGAAGCTTCAAAACTGGCAGCAGGTAGTGGAAATAAAGGTGGTCAGTTTGCTTTTAACACACTAAGACTTATTCTCACTGCT LITVPLQIVEFYLILAAVTAVTSGLFWRLLGASLVMLVFGFLGEAGLLSATVGFAVGMAAWIYIIYEVFSGEASKLAAGSGNKGGQFAFNTLRLILTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACCGTACCATTACAGATCGTAGAATTTTACCTTATACTTGCAGCC---------GTA---ACCGCTGTGACCAGT---GGCTTA------------------------------------TTTTGGAGA---TTGCTAGGAGCATCACTTGTAATGCTCGTATTTGGATTCTTAGGAGAA---------GCA------------------GGA------CTG---------------------------------TTG------------------------------------------------------------------AGTGCG------------------ACTGTTGGA---TTTGCTGTTGGAATGGCTGCATGGATCTACATAATCTATGAAGTT---------------TTC------AGT---GGAGAAGCTTCAAAACTGGCAGCAGGT------AGT---GGAAATAAAGGTGGT---CAG---TTT---GCT---TTT---AAC---ACACTA---AGACTTATTCTCACTGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVTS-GL------------FWR-LLGASLVMLVFGFLGE---A------G--L-----------L----------------------SA------TVG-FAVGMAAWIYIIYEV-----F--S-GEASKLAAG--S-GNKGG-Q-F-A-F-N-TL-RLILTA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927712 [unk-euryarch-a] PRGD_OTU015_8e87b0b2426f82ae70607048817a5619 gb|KJ927712| PRGD_OTU015_8e87b0b2426f82ae70607048817a5619, putative proteorhodopsin gene, partial cds. PRGD_OTU015_8e87b0b2426f82ae70607048817a5619, putative proteorhodopsin gene, partial cds. KJ927712 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Indian Ocean (-33.28, 45.35) TTGATTACAGTACCATTACAGATTGTAGAATTTTACCTCATACTTGCAGCCGTAACCGCTGTGACTAGTGGCTTATTCTGGAGATTACTAGGAGCATCACTTGTAATGCTCGTATTTGGATTTCTAGGAGAAGCAGGTCTGATGAATGCGACTGTCGGATTTGCTATCGGAATGGCTGCATGGATCTACATAATCTATGAAGTTTTTAGTGGAGAAGCTTCAAAACTAGCAGCGGGTAGTGGAAATAAGGGTGGTCAGTTTGCTTTTAACACATTAAGACTCATTCTCACTGCT LITVPLQIVEFYLILAAVTAVTSGLFWRLLGASLVMLVFGFLGEAGLMNATVGFAIGMAAWIYIIYEVFSGEASKLAAGSGNKGGQFAFNTLRLILTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACAGTACCATTACAGATTGTAGAATTTTACCTCATACTTGCAGCC---------GTA---ACCGCTGTGACTAGT---GGCTTA------------------------------------TTCTGGAGA---TTACTAGGAGCATCACTTGTAATGCTCGTATTTGGATTTCTAGGAGAA---------GCA------------------GGT------CTG---------------------------------ATG------------------------------------------------------------------AATGCG------------------ACTGTCGGA---TTTGCTATCGGAATGGCTGCATGGATCTACATAATCTATGAAGTT---------------TTT------AGT---GGAGAAGCTTCAAAACTAGCAGCGGGT------AGT---GGAAATAAGGGTGGT---CAG---TTT---GCT---TTT---AAC---ACATTA---AGACTCATTCTCACTGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVTS-GL------------FWR-LLGASLVMLVFGFLGE---A------G--L-----------M----------------------NA------TVG-FAIGMAAWIYIIYEV-----F--S-GEASKLAAG--S-GNKGG-Q-F-A-F-N-TL-RLILTA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ929844 [unk-euryarch-a] PRGD_OTU295_otuREP_118a4bed81f0528f4f782182459bde8c gb|KJ929844| PRGD_OTU295_otuREP_118a4bed81f0528f4f782182459bde8c, putative proteorhodopsin gene, partial cds. PRGD_OTU295_otuREP_118a4bed81f0528f4f782182459bde8c, putative proteorhodopsin gene, partial cds. KJ929844 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAATTACCGTACCATTACAGATTGTTGAATTTTATTTGATATTAGCGGCAGTTACAATAGTGCCGGTTATGCTCTTTTGGAAATTGCTCGGGGCTTCACTTGTTATGTTGGTTTTTGGATTTCTCGGAGAAGCCGGTCTCATGGATGTAACTCTTGGATTTGTAGTGGGTATGATCGCGTGGATATATATTATATACGAAGTATTTTCTGGAGAAGCTTCCAAATTAAGTGAATCAAGCGGCAATAAAGGTGGTCAGTTTGCATTTAACACACTAAGGTTAATTTTAACAGCT LITVPLQIVEFYLILAAVTIVPVMLFWKLLGASLVMLVFGFLGEAGLMDVTLGFVVGMIAWIYIIYEVFSGEASKLSESSGNKGGQFAFNTLRLILTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACCGTACCATTACAGATTGTTGAATTTTATTTGATATTAGCGGCA---------GTT---ACAATAGTGCCGGTT---ATGCTC------------------------------------TTTTGGAAA---TTGCTCGGGGCTTCACTTGTTATGTTGGTTTTTGGATTTCTCGGAGAA---------GCC------------------GGT------CTC---------------------------------ATG------------------------------------------------------------------GATGTA------------------ACTCTTGGA---TTTGTAGTGGGTATGATCGCGTGGATATATATTATATACGAAGTA---------------TTT------TCT---GGAGAAGCTTCCAAATTAAGTGAATCA------AGC---GGCAATAAAGGTGGT---CAG---TTT---GCA---TTT---AAC---ACACTA---AGGTTAATTTTAACAGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TIVPV-ML------------FWK-LLGASLVMLVFGFLGE---A------G--L-----------M----------------------DV------TLG-FVVGMIAWIYIIYEV-----F--S-GEASKLSES--S-GNKGG-Q-F-A-F-N-TL-RLILTA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927701 [unk-euryarch-a] PRGD_OTU015_55e68269f4117fd33055aedacd029b1d gb|KJ927701| PRGD_OTU015_55e68269f4117fd33055aedacd029b1d, putative proteorhodopsin gene, partial cds. PRGD_OTU015_55e68269f4117fd33055aedacd029b1d, putative proteorhodopsin gene, partial cds. KJ927701 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTAATAACTGTGCCGCTTCAAATTGTTGAATTCTATTTAATCCTCGTGGCGGTAACTGCCGTTACCAGTGCATTGTTTTGGAGATTACTCGGTGCGTCTCTAGTAATGTTAGTTTTTGGATTTTTAGGTGAAGCAGGCCTCCTTGACGCAACCGTAGGTTTTGCTATCGGAATGGCTGGATGGATTTATATCATATACGAAGTATTTAGCGGTGAAGCTTCCAAACTTAGTGAATCAAGTGGTAATGCTGGTGGTCAGTTTGCTTTCAACACCCTGAGATTAATCTTAACTGCT LITVPLQIVEFYLILVAVTAVTSALFWRLLGASLVMLVFGFLGEAGLLDATVGFAIGMAGWIYIIYEVFSGEASKLSESSGNAGGQFAFNTLRLILTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATAACTGTGCCGCTTCAAATTGTTGAATTCTATTTAATCCTCGTGGCG---------GTA---ACTGCCGTTACCAGT---GCATTG------------------------------------TTTTGGAGA---TTACTCGGTGCGTCTCTAGTAATGTTAGTTTTTGGATTTTTAGGTGAA---------GCA------------------GGC------CTC---------------------------------CTT------------------------------------------------------------------GACGCA------------------ACCGTAGGT---TTTGCTATCGGAATGGCTGGATGGATTTATATCATATACGAAGTA---------------TTT------AGC---GGTGAAGCTTCCAAACTTAGTGAATCA------AGT---GGTAATGCTGGTGGT---CAG---TTT---GCT---TTC---AAC---ACCCTG---AGATTAATCTTAACTGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILVA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--L-----------L----------------------DA------TVG-FAIGMAGWIYIIYEV-----F--S-GEASKLSES--S-GNAGG-Q-F-A-F-N-TL-RLILTA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927724 [unk-euryarch-a] PRGD_OTU015_d2ccd580fbcbe668bbe064521680a3df gb|KJ927724| PRGD_OTU015_d2ccd580fbcbe668bbe064521680a3df, putative proteorhodopsin gene, partial cds. PRGD_OTU015_d2ccd580fbcbe668bbe064521680a3df, putative proteorhodopsin gene, partial cds. KJ927724 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTAATAACTGTGCCGCTTCAAATTGTTGAATTCTATTTAATCCTCGTGGCGGTAACTGCCGTTACCAGTGCATTGTTTTGGAGATTACTCGGCGCGTCTCTAGTAATGTTAGTTTTTGGATTTTTAGGTGAAGCAGGCCTCCTTGACGCAACCGTAGGCTTTGCTATCGGAATGGCTGGATGGATTTATATCATATACGAAGTATTTAGCGGTGAAGCTTCCAAACTTAGTGAATCAAGTGGTAATGCTGGTGGTCAGTTTGCTTTTAACACCCTGAGATTAATCTTAACTGCT LITVPLQIVEFYLILVAVTAVTSALFWRLLGASLVMLVFGFLGEAGLLDATVGFAIGMAGWIYIIYEVFSGEASKLSESSGNAGGQFAFNTLRLILTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATAACTGTGCCGCTTCAAATTGTTGAATTCTATTTAATCCTCGTGGCG---------GTA---ACTGCCGTTACCAGT---GCATTG------------------------------------TTTTGGAGA---TTACTCGGCGCGTCTCTAGTAATGTTAGTTTTTGGATTTTTAGGTGAA---------GCA------------------GGC------CTC---------------------------------CTT------------------------------------------------------------------GACGCA------------------ACCGTAGGC---TTTGCTATCGGAATGGCTGGATGGATTTATATCATATACGAAGTA---------------TTT------AGC---GGTGAAGCTTCCAAACTTAGTGAATCA------AGT---GGTAATGCTGGTGGT---CAG---TTT---GCT---TTT---AAC---ACCCTG---AGATTAATCTTAACTGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILVA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--L-----------L----------------------DA------TVG-FAIGMAGWIYIIYEV-----F--S-GEASKLSES--S-GNAGG-Q-F-A-F-N-TL-RLILTA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927699 [unk-euryarch-a] PRGD_OTU015_4f148aebb8d5bd5e93522ce4bafb8de5 gb|KJ927699| PRGD_OTU015_4f148aebb8d5bd5e93522ce4bafb8de5, putative proteorhodopsin gene, partial cds. PRGD_OTU015_4f148aebb8d5bd5e93522ce4bafb8de5, putative proteorhodopsin gene, partial cds. KJ927699 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTAATAACTGTGCCGCTTCAAATTGTTGAATTCTATTTAATCCTCGTGGCGGTAACCGCCGTTACCAGTGCATTGTTTTGGAGATTACTCGGTGCGTCTCTAGTAATGTTAGTTTTTGGATTTTTAGGGGAAGCAGGCCTCCTTGACGCAACCGTAGGCTTTGCTATAGGAATGGCTGGCTGGATTTATATCATATACGAAGTATTTAGCGGTGAAGCTTCCAAACTTAGTGAATCAAGTGGTAATGCTGGTGGTCAGTTTGCTTTTAACACTCTGAGGCTAATCTTAACTGCT LITVPLQIVEFYLILVAVTAVTSALFWRLLGASLVMLVFGFLGEAGLLDATVGFAIGMAGWIYIIYEVFSGEASKLSESSGNAGGQFAFNTLRLILTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATAACTGTGCCGCTTCAAATTGTTGAATTCTATTTAATCCTCGTGGCG---------GTA---ACCGCCGTTACCAGT---GCATTG------------------------------------TTTTGGAGA---TTACTCGGTGCGTCTCTAGTAATGTTAGTTTTTGGATTTTTAGGGGAA---------GCA------------------GGC------CTC---------------------------------CTT------------------------------------------------------------------GACGCA------------------ACCGTAGGC---TTTGCTATAGGAATGGCTGGCTGGATTTATATCATATACGAAGTA---------------TTT------AGC---GGTGAAGCTTCCAAACTTAGTGAATCA------AGT---GGTAATGCTGGTGGT---CAG---TTT---GCT---TTT---AAC---ACTCTG---AGGCTAATCTTAACTGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILVA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--L-----------L----------------------DA------TVG-FAIGMAGWIYIIYEV-----F--S-GEASKLSES--S-GNAGG-Q-F-A-F-N-TL-RLILTA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927709 [unk-euryarch-a] PRGD_OTU015_77b6502b1931de7f4d522661a3a080dd gb|KJ927709| PRGD_OTU015_77b6502b1931de7f4d522661a3a080dd, putative proteorhodopsin gene, partial cds. PRGD_OTU015_77b6502b1931de7f4d522661a3a080dd, putative proteorhodopsin gene, partial cds. KJ927709 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTAATAACTGTGCCGCTTCAAATTGTTGAATTCTATTTAATCCTTGTAGCGGTAACTGCCGTTACTAGTGCGCTTTTTTGGAGATTACTCGGTGCGTCTCTAGTAATGTTAGTTTTTGGATTTTTAGGGGAAGCAGGCCTCCTTGACGCAACCGTAGGTTTTGCTATAGGAATGGCTGGCTGGATTTATATTATATACGAAGTATTTAGTGGTGAAGCTTCCAAACTTAGTGAATCAAGTGGTAACGCTGGTGGTCAGTTTGCTTTTAACACCCTGAGGTTAATCTTAACTGCT LITVPLQIVEFYLILVAVTAVTSALFWRLLGASLVMLVFGFLGEAGLLDATVGFAIGMAGWIYIIYEVFSGEASKLSESSGNAGGQFAFNTLRLILTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATAACTGTGCCGCTTCAAATTGTTGAATTCTATTTAATCCTTGTAGCG---------GTA---ACTGCCGTTACTAGT---GCGCTT------------------------------------TTTTGGAGA---TTACTCGGTGCGTCTCTAGTAATGTTAGTTTTTGGATTTTTAGGGGAA---------GCA------------------GGC------CTC---------------------------------CTT------------------------------------------------------------------GACGCA------------------ACCGTAGGT---TTTGCTATAGGAATGGCTGGCTGGATTTATATTATATACGAAGTA---------------TTT------AGT---GGTGAAGCTTCCAAACTTAGTGAATCA------AGT---GGTAACGCTGGTGGT---CAG---TTT---GCT---TTT---AAC---ACCCTG---AGGTTAATCTTAACTGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILVA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--L-----------L----------------------DA------TVG-FAIGMAGWIYIIYEV-----F--S-GEASKLSES--S-GNAGG-Q-F-A-F-N-TL-RLILTA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927711 [unk-euryarch-a] PRGD_OTU015_883d95b65f4f2e05ba57b34dd6aef895 gb|KJ927711| PRGD_OTU015_883d95b65f4f2e05ba57b34dd6aef895, putative proteorhodopsin gene, partial cds. PRGD_OTU015_883d95b65f4f2e05ba57b34dd6aef895, putative proteorhodopsin gene, partial cds. KJ927711 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-14.48, 113.45) CTAATAACTGTGCCGCTTCAAATTGTTGAATTCTATTTAATCCTCGTAGCGGTAACTGCCGTTACTAGTGCGCTGTTTTGGAGATTACTCGGTGCGTCTCTAGTAATGTTAGTTTTTGGATTTTTAGGAGAAGCAGGCCTCCTTGACGCTACCGTAGGTTTTGCTATAGGAATGGCTGGCTGGATTTACATTATATATGAAGTATTTAGTGGTGAAGCTTCCAAGCTTAGTGAATCAAGTGGTAACGCTGGTGGTCAGTTTGCTTTTAACACCTTGAGGTTAATCTTAACTGCT LITVPLQIVEFYLILVAVTAVTSALFWRLLGASLVMLVFGFLGEAGLLDATVGFAIGMAGWIYIIYEVFSGEASKLSESSGNAGGQFAFNTLRLILTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATAACTGTGCCGCTTCAAATTGTTGAATTCTATTTAATCCTCGTAGCG---------GTA---ACTGCCGTTACTAGT---GCGCTG------------------------------------TTTTGGAGA---TTACTCGGTGCGTCTCTAGTAATGTTAGTTTTTGGATTTTTAGGAGAA---------GCA------------------GGC------CTC---------------------------------CTT------------------------------------------------------------------GACGCT------------------ACCGTAGGT---TTTGCTATAGGAATGGCTGGCTGGATTTACATTATATATGAAGTA---------------TTT------AGT---GGTGAAGCTTCCAAGCTTAGTGAATCA------AGT---GGTAACGCTGGTGGT---CAG---TTT---GCT---TTT---AAC---ACCTTG---AGGTTAATCTTAACTGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILVA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--L-----------L----------------------DA------TVG-FAIGMAGWIYIIYEV-----F--S-GEASKLSES--S-GNAGG-Q-F-A-F-N-TL-RLILTA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927680 [unk-euryarch-a] PRGD_OTU015_otuREP_3f77005a63a46d4090f21ae9a1080abe gb|KJ927680| PRGD_OTU015_otuREP_3f77005a63a46d4090f21ae9a1080abe, putative proteorhodopsin gene, partial cds. PRGD_OTU015_otuREP_3f77005a63a46d4090f21ae9a1080abe, putative proteorhodopsin gene, partial cds. KJ927680 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTAATAACCGTACCGCTTCAAATTGTTGAATTCTATTTAATTCTCGTAGCGGTAACCGCCGTTACTAGTGCATTGTTTTGGAGATTGCTTGGTGCGTCTCTGGTGATGTTAGTTTTTGGATTTTTAGGTGAAGCAGGTCTCCTTGATGCAACCGTAGGCTTTGCTATAGGAATGGCTGGCTGGATTTATATCATATACGAAGTATTTAGCGGTGAAGCTTCCAAACTGAGTGAATCAAGTGGAAATGCTGGTGGTCAGTTTGCTTTTAACACTCTGAGGCTAATATTAACTGCT LITVPLQIVEFYLILVAVTAVTSALFWRLLGASLVMLVFGFLGEAGLLDATVGFAIGMAGWIYIIYEVFSGEASKLSESSGNAGGQFAFNTLRLILTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATAACCGTACCGCTTCAAATTGTTGAATTCTATTTAATTCTCGTAGCG---------GTA---ACCGCCGTTACTAGT---GCATTG------------------------------------TTTTGGAGA---TTGCTTGGTGCGTCTCTGGTGATGTTAGTTTTTGGATTTTTAGGTGAA---------GCA------------------GGT------CTC---------------------------------CTT------------------------------------------------------------------GATGCA------------------ACCGTAGGC---TTTGCTATAGGAATGGCTGGCTGGATTTATATCATATACGAAGTA---------------TTT------AGC---GGTGAAGCTTCCAAACTGAGTGAATCA------AGT---GGAAATGCTGGTGGT---CAG---TTT---GCT---TTT---AAC---ACTCTG---AGGCTAATATTAACTGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILVA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--L-----------L----------------------DA------TVG-FAIGMAGWIYIIYEV-----F--S-GEASKLSES--S-GNAGG-Q-F-A-F-N-TL-RLILTA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927718 [unk-euryarch-a] PRGD_OTU015_ad58c9288770ac924a91d88521c93d5e gb|KJ927718| PRGD_OTU015_ad58c9288770ac924a91d88521c93d5e, putative proteorhodopsin gene, partial cds. PRGD_OTU015_ad58c9288770ac924a91d88521c93d5e, putative proteorhodopsin gene, partial cds. KJ927718 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTAATAACCGTACCGCTTCAAATTGTTGAATTCTACTTAATTCTCGTAGCGGTAACCGCCGTTACTAGTGCATTGTTTTGGAGATTGCTTGGTGCGTCTCTGGTGATGTTAGTTTTTGGATTTTTAGGTGAAGCAGGTCTTCTTGATGCAACCGTAGGCTTTGCTATCGGAATGGCTGGCTGGATTTACATTATATATGAAGTCTTCAGTGGTGAAGCTTCCAAACTGAGTGAATCAAGTGGAAATGCTGGTGGTCAGTTTGCTTTTAACACTCTGAGGCTAATCTTAACTGCT LITVPLQIVEFYLILVAVTAVTSALFWRLLGASLVMLVFGFLGEAGLLDATVGFAIGMAGWIYIIYEVFSGEASKLSESSGNAGGQFAFNTLRLILTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATAACCGTACCGCTTCAAATTGTTGAATTCTACTTAATTCTCGTAGCG---------GTA---ACCGCCGTTACTAGT---GCATTG------------------------------------TTTTGGAGA---TTGCTTGGTGCGTCTCTGGTGATGTTAGTTTTTGGATTTTTAGGTGAA---------GCA------------------GGT------CTT---------------------------------CTT------------------------------------------------------------------GATGCA------------------ACCGTAGGC---TTTGCTATCGGAATGGCTGGCTGGATTTACATTATATATGAAGTC---------------TTC------AGT---GGTGAAGCTTCCAAACTGAGTGAATCA------AGT---GGAAATGCTGGTGGT---CAG---TTT---GCT---TTT---AAC---ACTCTG---AGGCTAATCTTAACTGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILVA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--L-----------L----------------------DA------TVG-FAIGMAGWIYIIYEV-----F--S-GEASKLSES--S-GNAGG-Q-F-A-F-N-TL-RLILTA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927720 [unk-euryarch-a] PRGD_OTU015_bb138b0255eabadcbf95ee55b22040b6 gb|KJ927720| PRGD_OTU015_bb138b0255eabadcbf95ee55b22040b6, putative proteorhodopsin gene, partial cds. PRGD_OTU015_bb138b0255eabadcbf95ee55b22040b6, putative proteorhodopsin gene, partial cds. KJ927720 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTAATAACTGTACCGCTTCAAATTGTTGAATTCTATTTAATCCTTGTGGCTGTAACCGCCGTTACTAGTGCATTGTTCTGGAGATTGCTCGGTGCGTCTCTAGTAATGTTAGTTTTTGGATTCTTAGGGGAAGCAGGCCTTCTTGATCCAACCGTAGGTTTCGCTATTGGAATGGCTGGCTGGATTTACATTATATATGAAGTGTTTAGTGGTGAAGCTTCTAAACTTAGTGAATCAAGTGGTAATGCTGGTGGTCAGTTTGCTTTTAACACCCTTAGGTTAATCCTAACCGCT LITVPLQIVEFYLILVAVTAVTSALFWRLLGASLVMLVFGFLGEAGLLDPTVGFAIGMAGWIYIIYEVFSGEASKLSESSGNAGGQFAFNTLRLILTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATAACTGTACCGCTTCAAATTGTTGAATTCTATTTAATCCTTGTGGCT---------GTA---ACCGCCGTTACTAGT---GCATTG------------------------------------TTCTGGAGA---TTGCTCGGTGCGTCTCTAGTAATGTTAGTTTTTGGATTCTTAGGGGAA---------GCA------------------GGC------CTT---------------------------------CTT------------------------------------------------------------------GATCCA------------------ACCGTAGGT---TTCGCTATTGGAATGGCTGGCTGGATTTACATTATATATGAAGTG---------------TTT------AGT---GGTGAAGCTTCTAAACTTAGTGAATCA------AGT---GGTAATGCTGGTGGT---CAG---TTT---GCT---TTT---AAC---ACCCTT---AGGTTAATCCTAACCGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILVA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--L-----------L----------------------DP------TVG-FAIGMAGWIYIIYEV-----F--S-GEASKLSES--S-GNAGG-Q-F-A-F-N-TL-RLILTA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ927729 [unk-euryarch-a] PRGD_OTU015_e1300d58a42d2e12f4e1fb5cdcdbeb71 gb|KJ927729| PRGD_OTU015_e1300d58a42d2e12f4e1fb5cdcdbeb71, putative proteorhodopsin gene, partial cds. PRGD_OTU015_e1300d58a42d2e12f4e1fb5cdcdbeb71, putative proteorhodopsin gene, partial cds. KJ927729 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATAACTGTACCGCTTCAAATTGTTGAATTCTATTTAATCCTTGTGGCTGTAACCGCCGTTACTAGTGCATTGTTCTGGAGATTGCTCGGTGCGTCTCTAGTAATGTTAGTTTTTGGATTCTTAGGGGAGGCAGGCCTTCTTGATCCAACCGTAGGTTTCGCTATCGGAATGGCTGGCTGGATTTACATTATATATGAAGTGTTTAGTGGTGAAGCTTCTAAACTTAGTGAATCAAGTGGTAATGCTGGTGGTCAGTTTGCTTTTAACACCCTTAGGTTAATCCTAACCGCT LITVPLQIVEFYLILVAVTAVTSALFWRLLGASLVMLVFGFLGEAGLLDPTVGFAIGMAGWIYIIYEVFSGEASKLSESSGNAGGQFAFNTLRLILTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATAACTGTACCGCTTCAAATTGTTGAATTCTATTTAATCCTTGTGGCT---------GTA---ACCGCCGTTACTAGT---GCATTG------------------------------------TTCTGGAGA---TTGCTCGGTGCGTCTCTAGTAATGTTAGTTTTTGGATTCTTAGGGGAG---------GCA------------------GGC------CTT---------------------------------CTT------------------------------------------------------------------GATCCA------------------ACCGTAGGT---TTCGCTATCGGAATGGCTGGCTGGATTTACATTATATATGAAGTG---------------TTT------AGT---GGTGAAGCTTCTAAACTTAGTGAATCA------AGT---GGTAATGCTGGTGGT---CAG---TTT---GCT---TTT---AAC---ACCCTT---AGGTTAATCCTAACCGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILVA---V-TAVTS-AL------------FWR-LLGASLVMLVFGFLGE---A------G--L-----------L----------------------DP------TVG-FAIGMAGWIYIIYEV-----F--S-GEASKLSES--S-GNAGG-Q-F-A-F-N-TL-RLILTA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ929541 [unk-euryarch-a] PRGD_OTU148_e5e8833559a9dcc0e3718b811b80f272 gb|KJ929541| PRGD_OTU148_e5e8833559a9dcc0e3718b811b80f272, putative proteorhodopsin gene, partial cds. PRGD_OTU148_e5e8833559a9dcc0e3718b811b80f272, putative proteorhodopsin gene, partial cds. KJ929541 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), English Channel (48.7717, -3.9683) CTAATCACTGTTCCGCTCCAGATTGTTGAGTTCTATTTAATTCTTTTAGCGGTGACGGCTGTTGCAAGCGGGTTATTCTGGAGATTATTGAGTGCCTCATTAGTAATGCTTGTATTTGGTTTTATGGGTGAAGCGGGGATACTAAACGCGACAACTGGTTTCATTTTTGGAATGGCTGGTTGGGTGTATATATTATACGAAATATTTTTTGGAGAGGCTGCAAAGCTCAGTGAAAATAGCAACAACCCTGGTGGTCAGTTTGCTTTTAATAGCCTTAGACTAATAGTTACTGTT LITVPLQIVEFYLILLAVTAVASGLFWRLLSASLVMLVFGFMGEAGILNATTGFIFGMAGWVYILYEIFFGEAAKLSENSNNPGGQFAFNSLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACTGTTCCGCTCCAGATTGTTGAGTTCTATTTAATTCTTTTAGCG---------GTG---ACGGCTGTTGCAAGC---GGGTTA------------------------------------TTCTGGAGA---TTATTGAGTGCCTCATTAGTAATGCTTGTATTTGGTTTTATGGGTGAA---------GCG------------------GGG------ATA---------------------------------CTA------------------------------------------------------------------AACGCG------------------ACAACTGGT---TTCATTTTTGGAATGGCTGGTTGGGTGTATATATTATACGAAATA---------------TTT------TTT---GGAGAGGCTGCAAAGCTCAGTGAAAAT------AGC---AACAACCCTGGTGGT---CAG---TTT---GCT---TTT---AAT---AGCCTT---AGACTAATAGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILLA---V-TAVAS-GL------------FWR-LLSASLVMLVFGFMGE---A------G--I-----------L----------------------NA------TTG-FIFGMAGWVYILYEI-----F--F-GEAAKLSEN--S-NNPGG-Q-F-A-F-N-SL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ929538 [unk-euryarch-a] PRGD_OTU148_otuREP_fca4f3eb03d09028be2055193ce76a8b gb|KJ929538| PRGD_OTU148_otuREP_fca4f3eb03d09028be2055193ce76a8b, putative proteorhodopsin gene, partial cds. PRGD_OTU148_otuREP_fca4f3eb03d09028be2055193ce76a8b, putative proteorhodopsin gene, partial cds. KJ929538 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) CTAATCACTGTTCCGCTCCAGATAGTTGAGTTCTATTTAATTCTTTTAGCGGTGACGGCTGTTGCAAGCGGGTTATTCTGGAGATTATTGAGTGCCTCATTAGTAATGCTTGTATTTGGTTTTATGGGTGAAGCGGGGATACTAAACGCGACAACCGGTTTCATTTTTGGAATGGCTGGTTGGATGTATATATTATACGAAATATTTTTTGGAGAGGCTGCAAAGCTCAGTGAAAATAGCAACAACCTTGGTGGTCAGTTTGCTTTTAATAGCCTTAGACTAATAGTTACTGTT LITVPLQIVEFYLILLAVTAVASGLFWRLLSASLVMLVFGFMGEAGILNATTGFIFGMAGWMYILYEIFFGEAAKLSENSNNLGGQFAFNSLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACTGTTCCGCTCCAGATAGTTGAGTTCTATTTAATTCTTTTAGCG---------GTG---ACGGCTGTTGCAAGC---GGGTTA------------------------------------TTCTGGAGA---TTATTGAGTGCCTCATTAGTAATGCTTGTATTTGGTTTTATGGGTGAA---------GCG------------------GGG------ATA---------------------------------CTA------------------------------------------------------------------AACGCG------------------ACAACCGGT---TTCATTTTTGGAATGGCTGGTTGGATGTATATATTATACGAAATA---------------TTT------TTT---GGAGAGGCTGCAAAGCTCAGTGAAAAT------AGC---AACAACCTTGGTGGT---CAG---TTT---GCT---TTT---AAT---AGCCTT---AGACTAATAGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILLA---V-TAVAS-GL------------FWR-LLSASLVMLVFGFMGE---A------G--I-----------L----------------------NA------TTG-FIFGMAGWMYILYEI-----F--F-GEAAKLSEN--S-NNLGG-Q-F-A-F-N-SL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ929539 [unk-euryarch-a] PRGD_OTU148_6640b92e95fc1eb84d187aefc4cc5ebe gb|KJ929539| PRGD_OTU148_6640b92e95fc1eb84d187aefc4cc5ebe, putative proteorhodopsin gene, partial cds. PRGD_OTU148_6640b92e95fc1eb84d187aefc4cc5ebe, putative proteorhodopsin gene, partial cds. KJ929539 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATTACTGTTCCGCTCCAAATTGTTGAGTTCTACTTAATTCTTTTAGCGGTGACAGCTGTTGCAAGCGGATTATTCTGGAGATTATTGAGTGCTTCATTAGTAATGCTTGTATTTGGTTTTATGGGTGAAGCGGGGATACTAAACGCGACAATTGGTTTCATTTTTGGAATGGCTGGTTGGGTGTATATATTATACGAAATATTTTTTGGAGAGGCTGCAAAGCTCAGTGAAAATAGCAACAACCCTGGTGGTCAGTTTGCTTTTAATAGCCTTAGATTAATAGTTACTGTT LITVPLQIVEFYLILLAVTAVASGLFWRLLSASLVMLVFGFMGEAGILNATIGFIFGMAGWVYILYEIFFGEAAKLSENSNNPGGQFAFNSLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTTCCGCTCCAAATTGTTGAGTTCTACTTAATTCTTTTAGCG---------GTG---ACAGCTGTTGCAAGC---GGATTA------------------------------------TTCTGGAGA---TTATTGAGTGCTTCATTAGTAATGCTTGTATTTGGTTTTATGGGTGAA---------GCG------------------GGG------ATA---------------------------------CTA------------------------------------------------------------------AACGCG------------------ACAATTGGT---TTCATTTTTGGAATGGCTGGTTGGGTGTATATATTATACGAAATA---------------TTT------TTT---GGAGAGGCTGCAAAGCTCAGTGAAAAT------AGC---AACAACCCTGGTGGT---CAG---TTT---GCT---TTT---AAT---AGCCTT---AGATTAATAGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILLA---V-TAVAS-GL------------FWR-LLSASLVMLVFGFMGE---A------G--I-----------L----------------------NA------TIG-FIFGMAGWVYILYEI-----F--F-GEAAKLSEN--S-NNPGG-Q-F-A-F-N-SL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ929540 [unk-euryarch-a] PRGD_OTU148_e34b6e2a6f98584fff4b839bc5d8ba41 gb|KJ929540| PRGD_OTU148_e34b6e2a6f98584fff4b839bc5d8ba41, putative proteorhodopsin gene, partial cds. PRGD_OTU148_e34b6e2a6f98584fff4b839bc5d8ba41, putative proteorhodopsin gene, partial cds. KJ929540 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATTACTGTTCCGCTCCAAATTGTTGAGTTCTACTTAATTCTTTTAGCGGTGACAGCTGTTGCAAGCGGATTATTCTGGAGATTATTGAGCGCTTCATTAGTAATGCTTGTATTTGGTTTTATGGGTGAAGCGGGGATACTAAACGCGACAATTGGTTTCATTTTTGGAATGGCTGGTTGGGTGTATATATTATACGAAATATTTTTTGGAGAAGCTGCAAAGCTCAGTGAAAATAGCAACAACCCTGGTGGTCAGTTTGCTTTTAATAGCCTTAGACTAATAGTTACTGTT LITVPLQIVEFYLILLAVTAVASGLFWRLLSASLVMLVFGFMGEAGILNATIGFIFGMAGWVYILYEIFFGEAAKLSENSNNPGGQFAFNSLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTTCCGCTCCAAATTGTTGAGTTCTACTTAATTCTTTTAGCG---------GTG---ACAGCTGTTGCAAGC---GGATTA------------------------------------TTCTGGAGA---TTATTGAGCGCTTCATTAGTAATGCTTGTATTTGGTTTTATGGGTGAA---------GCG------------------GGG------ATA---------------------------------CTA------------------------------------------------------------------AACGCG------------------ACAATTGGT---TTCATTTTTGGAATGGCTGGTTGGGTGTATATATTATACGAAATA---------------TTT------TTT---GGAGAAGCTGCAAAGCTCAGTGAAAAT------AGC---AACAACCCTGGTGGT---CAG---TTT---GCT---TTT---AAT---AGCCTT---AGACTAATAGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILLA---V-TAVAS-GL------------FWR-LLSASLVMLVFGFMGE---A------G--I-----------L----------------------NA------TIG-FIFGMAGWVYILYEI-----F--F-GEAAKLSEN--S-NNPGG-Q-F-A-F-N-SL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ928181 [unk-euryarch-a] PRGD_OTU027_23ab75b882f2f479446a97ab03b9d75e gb|KJ928181| PRGD_OTU027_23ab75b882f2f479446a97ab03b9d75e, putative proteorhodopsin gene, partial cds. PRGD_OTU027_23ab75b882f2f479446a97ab03b9d75e, putative proteorhodopsin gene, partial cds. KJ928181 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) CTTATTACTGTTCCACTTCAAATAGTTGAGTTTTATTTAATTCTTGCGGCTGTAACAGCAGTAACAAGTATTTTATTTTGGCGATTATTGGGTGCGTCACTAGTAATGCTTGTTTTTGGTTTCTTAGGAGAAGCAGGTCTAATGGATGCTACCATCGGTTTTGTAATCGGAATGGCTGGTTGGATATATATTATCTATGAAATTTTTGCAGGGGAAGCTGCAAAACTTAGCGAAAACAGTAAAAATGCAGGTGGTCAATTTGCTTTTAATACTTTAAGGCTAATTGTTACTGTT LITVPLQIVEFYLILAAVTAVTSILFWRLLGASLVMLVFGFLGEAGLMDATIGFVIGMAGWIYIIYEIFAGEAAKLSENSKNAGGQFAFNTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATTACTGTTCCACTTCAAATAGTTGAGTTTTATTTAATTCTTGCGGCT---------GTA---ACAGCAGTAACAAGT---ATTTTA------------------------------------TTTTGGCGA---TTATTGGGTGCGTCACTAGTAATGCTTGTTTTTGGTTTCTTAGGAGAA---------GCA------------------GGT------CTA---------------------------------ATG------------------------------------------------------------------GATGCT------------------ACCATCGGT---TTTGTAATCGGAATGGCTGGTTGGATATATATTATCTATGAAATT---------------TTT------GCA---GGGGAAGCTGCAAAACTTAGCGAAAAC------AGT---AAAAATGCAGGTGGT---CAA---TTT---GCT---TTT---AAT---ACTTTA---AGGCTAATTGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVTS-IL------------FWR-LLGASLVMLVFGFLGE---A------G--L-----------M----------------------DA------TIG-FVIGMAGWIYIIYEI-----F--A-GEAAKLSEN--S-KNAGG-Q-F-A-F-N-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ928187 [unk-euryarch-a] PRGD_OTU027_5d0d849cfeab4a1a6623edb67aa5af8d gb|KJ928187| PRGD_OTU027_5d0d849cfeab4a1a6623edb67aa5af8d, putative proteorhodopsin gene, partial cds. PRGD_OTU027_5d0d849cfeab4a1a6623edb67aa5af8d, putative proteorhodopsin gene, partial cds. KJ928187 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) CTTATTACTGTTCCACTTCAAATAGTTGAGTTTTATTTAATTCTTGCGGCTGTAACAGCAGTAACAAGTATTTTATTTTGGCGATTATTGGGTGCATCATTAGTAATGCTTGTTTTTGGTTTCTTAGGAGAAGCAGGTCTAATGGATGCTACCATCGGTTTTGTAATCGGAATGGCTGGTTGGATATATATTATCTATGAAATTTTTGCAGGGGAAGCTGCAAAGCTTAGCGAAAACAGTAAAAATGCAGGCGGTCAATTTGCTTTTAATACTTTAAGGCTAATTGTTACTGTT LITVPLQIVEFYLILAAVTAVTSILFWRLLGASLVMLVFGFLGEAGLMDATIGFVIGMAGWIYIIYEIFAGEAAKLSENSKNAGGQFAFNTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATTACTGTTCCACTTCAAATAGTTGAGTTTTATTTAATTCTTGCGGCT---------GTA---ACAGCAGTAACAAGT---ATTTTA------------------------------------TTTTGGCGA---TTATTGGGTGCATCATTAGTAATGCTTGTTTTTGGTTTCTTAGGAGAA---------GCA------------------GGT------CTA---------------------------------ATG------------------------------------------------------------------GATGCT------------------ACCATCGGT---TTTGTAATCGGAATGGCTGGTTGGATATATATTATCTATGAAATT---------------TTT------GCA---GGGGAAGCTGCAAAGCTTAGCGAAAAC------AGT---AAAAATGCAGGCGGT---CAA---TTT---GCT---TTT---AAT---ACTTTA---AGGCTAATTGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVTS-IL------------FWR-LLGASLVMLVFGFLGE---A------G--L-----------M----------------------DA------TIG-FVIGMAGWIYIIYEI-----F--A-GEAAKLSEN--S-KNAGG-Q-F-A-F-N-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ928200 [unk-euryarch-a] PRGD_OTU027_e25e203f31098dba173513f1e1f4626d gb|KJ928200| PRGD_OTU027_e25e203f31098dba173513f1e1f4626d, putative proteorhodopsin gene, partial cds. PRGD_OTU027_e25e203f31098dba173513f1e1f4626d, putative proteorhodopsin gene, partial cds. KJ928200 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (73.9992, 19.2097), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTTATTACTGTGCCACTTCAAATAGTTGAGTTTTATTTAATTCTTGCTGCTGTAACTGCAGTAACAAGTATTTTATTTTGGCGATTACTAGGTGCATCTTTAGTAATGCTTGTTTTCGGCTTTTTAGGAGAAGCAGGTCTAATGGATGCTACCATCGGTTTTGTAATCGGAATGGCTGGTTGGATATATATTATCTATGAAATTTTTGCTGGGGAAGCTGCAAAGCTTAGCGAAAACAGTAAAAATGCAGGCGGTCAATTTGCTTTTAATACTTTAAGGCTAATTGTTACTGTT LITVPLQIVEFYLILAAVTAVTSILFWRLLGASLVMLVFGFLGEAGLMDATIGFVIGMAGWIYIIYEIFAGEAAKLSENSKNAGGQFAFNTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATTACTGTGCCACTTCAAATAGTTGAGTTTTATTTAATTCTTGCTGCT---------GTA---ACTGCAGTAACAAGT---ATTTTA------------------------------------TTTTGGCGA---TTACTAGGTGCATCTTTAGTAATGCTTGTTTTCGGCTTTTTAGGAGAA---------GCA------------------GGT------CTA---------------------------------ATG------------------------------------------------------------------GATGCT------------------ACCATCGGT---TTTGTAATCGGAATGGCTGGTTGGATATATATTATCTATGAAATT---------------TTT------GCT---GGGGAAGCTGCAAAGCTTAGCGAAAAC------AGT---AAAAATGCAGGCGGT---CAA---TTT---GCT---TTT---AAT---ACTTTA---AGGCTAATTGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVTS-IL------------FWR-LLGASLVMLVFGFLGE---A------G--L-----------M----------------------DA------TIG-FVIGMAGWIYIIYEI-----F--A-GEAAKLSEN--S-KNAGG-Q-F-A-F-N-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ928188 [unk-euryarch-a] PRGD_OTU027_5dc98574aa2a0c93c96584579165ca52 gb|KJ928188| PRGD_OTU027_5dc98574aa2a0c93c96584579165ca52, putative proteorhodopsin gene, partial cds. PRGD_OTU027_5dc98574aa2a0c93c96584579165ca52, putative proteorhodopsin gene, partial cds. KJ928188 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -33.9602, -73.3769), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) CTTATTACTGTACCACTTCAAATAGTCGAGTTTTATTTAATTCTTGCGGCTGTAACTGCAGTAACAAGTATTTTATTCTGGCGATTATTGGGCGCGTCATTAGTAATGCTCGTTTTTGGTTTCTTAGGAGAAGCAGGTCTAATGGATGCTACTATCGGTTTTGTAATAGGAATGGCTGGTTGGATTTATATTATCTATGAAATTTTTGCAGGGGAAGCTGCAAAGTTAAGCGAAAACAGTAAAAATGCAGGCGGTCAATTTGCTTTCAATACCTTGAGATTGATTGTGACTGTT LITVPLQIVEFYLILAAVTAVTSILFWRLLGASLVMLVFGFLGEAGLMDATIGFVIGMAGWIYIIYEIFAGEAAKLSENSKNAGGQFAFNTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATTACTGTACCACTTCAAATAGTCGAGTTTTATTTAATTCTTGCGGCT---------GTA---ACTGCAGTAACAAGT---ATTTTA------------------------------------TTCTGGCGA---TTATTGGGCGCGTCATTAGTAATGCTCGTTTTTGGTTTCTTAGGAGAA---------GCA------------------GGT------CTA---------------------------------ATG------------------------------------------------------------------GATGCT------------------ACTATCGGT---TTTGTAATAGGAATGGCTGGTTGGATTTATATTATCTATGAAATT---------------TTT------GCA---GGGGAAGCTGCAAAGTTAAGCGAAAAC------AGT---AAAAATGCAGGCGGT---CAA---TTT---GCT---TTC---AAT---ACCTTG---AGATTGATTGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVTS-IL------------FWR-LLGASLVMLVFGFLGE---A------G--L-----------M----------------------DA------TIG-FVIGMAGWIYIIYEI-----F--A-GEAAKLSEN--S-KNAGG-Q-F-A-F-N-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ928197 [unk-euryarch-a] PRGD_OTU027_b479333300fadd78d05e53a946a3991b gb|KJ928197| PRGD_OTU027_b479333300fadd78d05e53a946a3991b, putative proteorhodopsin gene, partial cds. PRGD_OTU027_b479333300fadd78d05e53a946a3991b, putative proteorhodopsin gene, partial cds. KJ928197 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097) CTTATTACTGTGCCGCTTCAGATAGTTGAGTTTTATTTAATTCTTGCGGCTGTTACGGCAGTAACAAGTGTTCTGTTCTGGCGACTATTGGGTGCTTCATTAGTCATGCTCATTTTTGGTTTTCTTGGAGAAGCAGGTATTATGAATGCCACAATAGGCTTTGTAATTGGAATGGCCGGTTGGATATACATTATCTATGAAATTTTTGCTGGGGAAGCTGCAAAGCTTAGTGAGAACAGTAAAAATGCAGGTGGTCAATTTGCTTTTAATACCTTGAGATTAATTGTGACAGTT LITVPLQIVEFYLILAAVTAVTSVLFWRLLGASLVMLIFGFLGEAGIMNATIGFVIGMAGWIYIIYEIFAGEAAKLSENSKNAGGQFAFNTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATTACTGTGCCGCTTCAGATAGTTGAGTTTTATTTAATTCTTGCGGCT---------GTT---ACGGCAGTAACAAGT---GTTCTG------------------------------------TTCTGGCGA---CTATTGGGTGCTTCATTAGTCATGCTCATTTTTGGTTTTCTTGGAGAA---------GCA------------------GGT------ATT---------------------------------ATG------------------------------------------------------------------AATGCC------------------ACAATAGGC---TTTGTAATTGGAATGGCCGGTTGGATATACATTATCTATGAAATT---------------TTT------GCT---GGGGAAGCTGCAAAGCTTAGTGAGAAC------AGT---AAAAATGCAGGTGGT---CAA---TTT---GCT---TTT---AAT---ACCTTG---AGATTAATTGTGACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVTS-VL------------FWR-LLGASLVMLIFGFLGE---A------G--I-----------M----------------------NA------TIG-FVIGMAGWIYIIYEI-----F--A-GEAAKLSEN--S-KNAGG-Q-F-A-F-N-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ928177 [unk-euryarch-a] PRGD_OTU027_10f261128efa8edc8d1c7aaed2b1f05e gb|KJ928177| PRGD_OTU027_10f261128efa8edc8d1c7aaed2b1f05e, putative proteorhodopsin gene, partial cds. PRGD_OTU027_10f261128efa8edc8d1c7aaed2b1f05e, putative proteorhodopsin gene, partial cds. KJ928177 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTATTACTGTGCCACTTCAAATAGTTGAGTTTTATTTAATATTGGCTGCTGTTACTGCTGTAACTAGTACTTTATTTTGGAGACTTCTAGGGGCTTCATTAGTAATGCTTGTTTTTGGTTTCTTAGGAGAGGCTGGGCTAATGGATGTAACAATTGGTTTTGTAATTGGTATGGCTGGTTGGATTTATATCATTTACGAAATTTTTGCTGGAGAAGCTGCAAAGCTAAGCGAAAATAGTAAAAATGCAGGTGGTCAATTTGCATTCAATACCTTGAGGCTAATTGTGACAGTT LITVPLQIVEFYLILAAVTAVTSTLFWRLLGASLVMLVFGFLGEAGLMDVTIGFVIGMAGWIYIIYEIFAGEAAKLSENSKNAGGQFAFNTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATTACTGTGCCACTTCAAATAGTTGAGTTTTATTTAATATTGGCTGCT---------GTT---ACTGCTGTAACTAGT---ACTTTA------------------------------------TTTTGGAGA---CTTCTAGGGGCTTCATTAGTAATGCTTGTTTTTGGTTTCTTAGGAGAG---------GCT------------------GGG------CTA---------------------------------ATG------------------------------------------------------------------GATGTA------------------ACAATTGGT---TTTGTAATTGGTATGGCTGGTTGGATTTATATCATTTACGAAATT---------------TTT------GCT---GGAGAAGCTGCAAAGCTAAGCGAAAAT------AGT---AAAAATGCAGGTGGT---CAA---TTT---GCA---TTC---AAT---ACCTTG---AGGCTAATTGTGACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVTS-TL------------FWR-LLGASLVMLVFGFLGE---A------G--L-----------M----------------------DV------TIG-FVIGMAGWIYIIYEI-----F--A-GEAAKLSEN--S-KNAGG-Q-F-A-F-N-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ928193 [unk-euryarch-a] PRGD_OTU027_82e1611d00e9d66121b44e1bfcc8cafb gb|KJ928193| PRGD_OTU027_82e1611d00e9d66121b44e1bfcc8cafb, putative proteorhodopsin gene, partial cds. PRGD_OTU027_82e1611d00e9d66121b44e1bfcc8cafb, putative proteorhodopsin gene, partial cds. KJ928193 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Mediterranean Sea (33.762, 29.175) CTTATTACTGTTCCGCTACAGATAGTTGAGTTTTATTTAATTCTTGCTGCTGTAACTGCAGTAACAAGTACTTTATTTTGGAGACTGTTAGGAGCTTCATTAGTAATGCTTGTGTTTGGTTTCCTAGGAGAGGCTGGACTAATGGATGTAACAGTCGGTTTTGTAATTGGTATGGCTGGTTGGATTTATATTATTTACGAAATTTTTGCTGGAGAAGCAGCCAAATTAAGTGAAAATAGCAATGATCCCGGAGGACAATTTGCTTTCAATACCTTGAGGTTAATTGTGACTGTT LITVPLQIVEFYLILAAVTAVTSTLFWRLLGASLVMLVFGFLGEAGLMDVTVGFVIGMAGWIYIIYEIFAGEAAKLSENSNDPGGQFAFNTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATTACTGTTCCGCTACAGATAGTTGAGTTTTATTTAATTCTTGCTGCT---------GTA---ACTGCAGTAACAAGT---ACTTTA------------------------------------TTTTGGAGA---CTGTTAGGAGCTTCATTAGTAATGCTTGTGTTTGGTTTCCTAGGAGAG---------GCT------------------GGA------CTA---------------------------------ATG------------------------------------------------------------------GATGTA------------------ACAGTCGGT---TTTGTAATTGGTATGGCTGGTTGGATTTATATTATTTACGAAATT---------------TTT------GCT---GGAGAAGCAGCCAAATTAAGTGAAAAT------AGC---AATGATCCCGGAGGA---CAA---TTT---GCT---TTC---AAT---ACCTTG---AGGTTAATTGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVTS-TL------------FWR-LLGASLVMLVFGFLGE---A------G--L-----------M----------------------DV------TVG-FVIGMAGWIYIIYEI-----F--A-GEAAKLSEN--S-NDPGG-Q-F-A-F-N-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ928179 [unk-euryarch-a] PRGD_OTU027_19203de74e267213591a79f7405cd572 gb|KJ928179| PRGD_OTU027_19203de74e267213591a79f7405cd572, putative proteorhodopsin gene, partial cds. PRGD_OTU027_19203de74e267213591a79f7405cd572, putative proteorhodopsin gene, partial cds. KJ928179 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACTGTACCATTACAAATAGTTGAATTTTACCTTATACTAGCAGCTGTAACGGCTGTAACGAGCGTGTTATTTTGGCGACTTCTTGGTGCATCGCTGGTGATGTTAGTTTTTGGCTTCTTAGGTGAAGCAGGTCTTGTTGATGCTACTGTTGGCTTTGTTCTAGGAATGGCTGGATGGTTGTACATTATCTACGAAATTTTCGCTGGTGAGGCAGCAAAATTAAGTGAAAACAGCAACAATGCTGGAGGTCAGTTTGCATTCAATAGTCTAAGGTTAATTGTAACAATT LITVPLQIVEFYLILAAVTAVTSVLFWRLLGASLVMLVFGFLGEAGLVDATVGFVLGMAGWLYIIYEIFAGEAAKLSENSNNAGGQFAFNSLRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCATTACAAATAGTTGAATTTTACCTTATACTAGCAGCT---------GTA---ACGGCTGTAACGAGC---GTGTTA------------------------------------TTTTGGCGA---CTTCTTGGTGCATCGCTGGTGATGTTAGTTTTTGGCTTCTTAGGTGAA---------GCA------------------GGT------CTT---------------------------------GTT------------------------------------------------------------------GATGCT------------------ACTGTTGGC---TTTGTTCTAGGAATGGCTGGATGGTTGTACATTATCTACGAAATT---------------TTC------GCT---GGTGAGGCAGCAAAATTAAGTGAAAAC------AGC---AACAATGCTGGAGGT---CAG---TTT---GCA---TTC---AAT---AGTCTA---AGGTTAATTGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVTS-VL------------FWR-LLGASLVMLVFGFLGE---A------G--L-----------V----------------------DA------TVG-FVLGMAGWLYIIYEI-----F--A-GEAAKLSEN--S-NNAGG-Q-F-A-F-N-SL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ928203 [unk-euryarch-a] PRGD_OTU027_fcf635c2b08c9fb344ce1878e714dd39 gb|KJ928203| PRGD_OTU027_fcf635c2b08c9fb344ce1878e714dd39, putative proteorhodopsin gene, partial cds. PRGD_OTU027_fcf635c2b08c9fb344ce1878e714dd39, putative proteorhodopsin gene, partial cds. KJ928203 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACTGTACCATTACAAATAGTTGAATTTTACCTTATACTAGCAGCTGTAACGGCTGTAACGAGCGTGTTATTTTGGCGACTTCTAGGTGCATCTCTTGTGATGTTAGTTTTTGGTTTCTTAGGTGAAGCAGGCCTGGTTGATGCTACTGTTGGGTTTGTTCTTGGAATGGCTGGATGGTTGTACATTATTTACGAAATTTTCGCAGGTGAGGCAGCAAAATTAAGTGAAAACAGCAATAATGCTGGAGGTCAGTTTGCATTCAATACTCTAAGGTTAATTGTAACAGTT LITVPLQIVEFYLILAAVTAVTSVLFWRLLGASLVMLVFGFLGEAGLVDATVGFVLGMAGWLYIIYEIFAGEAAKLSENSNNAGGQFAFNTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCATTACAAATAGTTGAATTTTACCTTATACTAGCAGCT---------GTA---ACGGCTGTAACGAGC---GTGTTA------------------------------------TTTTGGCGA---CTTCTAGGTGCATCTCTTGTGATGTTAGTTTTTGGTTTCTTAGGTGAA---------GCA------------------GGC------CTG---------------------------------GTT------------------------------------------------------------------GATGCT------------------ACTGTTGGG---TTTGTTCTTGGAATGGCTGGATGGTTGTACATTATTTACGAAATT---------------TTC------GCA---GGTGAGGCAGCAAAATTAAGTGAAAAC------AGC---AATAATGCTGGAGGT---CAG---TTT---GCA---TTC---AAT---ACTCTA---AGGTTAATTGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVTS-VL------------FWR-LLGASLVMLVFGFLGE---A------G--L-----------V----------------------DA------TVG-FVLGMAGWLYIIYEI-----F--A-GEAAKLSEN--S-NNAGG-Q-F-A-F-N-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ928205 [unk-euryarch-a] PRGD_OTU027_fe49adc94fa1531f4b8cd395d6f7c913 gb|KJ928205| PRGD_OTU027_fe49adc94fa1531f4b8cd395d6f7c913, putative proteorhodopsin gene, partial cds. PRGD_OTU027_fe49adc94fa1531f4b8cd395d6f7c913, putative proteorhodopsin gene, partial cds. KJ928205 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) CTGATTACTGTGCCACTACAAATAGTTGAATTTTACCTTATCCTTGCAGCCGTAACTGCTGTAACAAGCGTGTTATTTTGGCGTCTTCTAGGTGCATCGCTTGTAATGTTAGTTTTTGGATTCTTAGGTGAAGCAGGTATTGTTGATGCCACTGTTGGGTTTGTTCTAGGAATGGCTGGCTGGTTATACATCATATATGAAATCTTCGCAGGTGAAGCAGCAAAATTAAGTGAAAACAGCAACAACGCTGGCGGTCAGTTTGCATTCAATACCCTAAGGTTAATTGTAACAGTT LITVPLQIVEFYLILAAVTAVTSVLFWRLLGASLVMLVFGFLGEAGIVDATVGFVLGMAGWLYIIYEIFAGEAAKLSENSNNAGGQFAFNTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTGCCACTACAAATAGTTGAATTTTACCTTATCCTTGCAGCC---------GTA---ACTGCTGTAACAAGC---GTGTTA------------------------------------TTTTGGCGT---CTTCTAGGTGCATCGCTTGTAATGTTAGTTTTTGGATTCTTAGGTGAA---------GCA------------------GGT------ATT---------------------------------GTT------------------------------------------------------------------GATGCC------------------ACTGTTGGG---TTTGTTCTAGGAATGGCTGGCTGGTTATACATCATATATGAAATC---------------TTC------GCA---GGTGAAGCAGCAAAATTAAGTGAAAAC------AGC---AACAACGCTGGCGGT---CAG---TTT---GCA---TTC---AAT---ACCCTA---AGGTTAATTGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVTS-VL------------FWR-LLGASLVMLVFGFLGE---A------G--I-----------V----------------------DA------TVG-FVLGMAGWLYIIYEI-----F--A-GEAAKLSEN--S-NNAGG-Q-F-A-F-N-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ928204 [unk-euryarch-a] PRGD_OTU027_fe129ed69f320016c29f8bb5306d5700 gb|KJ928204| PRGD_OTU027_fe129ed69f320016c29f8bb5306d5700, putative proteorhodopsin gene, partial cds. PRGD_OTU027_fe129ed69f320016c29f8bb5306d5700, putative proteorhodopsin gene, partial cds. KJ928204 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419) CTGATTACTGTACCACTACAAATAGTTGAATTTTACCTCATCCTTGCAGCTGTAACTGCTGTAACAAGCGTGTTATTCTGGCGTCTTCTAGGTGCATCGCTTGTGATGCTAGTTTTTGGTTTCCTAGGTGAAGCTGGTCTTGTTGATGCTACTATTGGGTTTGTTCTAGGAATGGCTGGCTGGTTATACATCATATATGAAATCTTCGCAGGTGAAGCAGCAAAATTAAGTGAAAACAGCAACAACGCTGGCGGTCAGTTTGCATTTAATACCCTAAGGTTAATTGTAACAGTT LITVPLQIVEFYLILAAVTAVTSVLFWRLLGASLVMLVFGFLGEAGLVDATIGFVLGMAGWLYIIYEIFAGEAAKLSENSNNAGGQFAFNTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTACCACTACAAATAGTTGAATTTTACCTCATCCTTGCAGCT---------GTA---ACTGCTGTAACAAGC---GTGTTA------------------------------------TTCTGGCGT---CTTCTAGGTGCATCGCTTGTGATGCTAGTTTTTGGTTTCCTAGGTGAA---------GCT------------------GGT------CTT---------------------------------GTT------------------------------------------------------------------GATGCT------------------ACTATTGGG---TTTGTTCTAGGAATGGCTGGCTGGTTATACATCATATATGAAATC---------------TTC------GCA---GGTGAAGCAGCAAAATTAAGTGAAAAC------AGC---AACAACGCTGGCGGT---CAG---TTT---GCA---TTT---AAT---ACCCTA---AGGTTAATTGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVTS-VL------------FWR-LLGASLVMLVFGFLGE---A------G--L-----------V----------------------DA------TIG-FVLGMAGWLYIIYEI-----F--A-GEAAKLSEN--S-NNAGG-Q-F-A-F-N-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ928199 [unk-euryarch-a] PRGD_OTU027_ddc2a05d99436183d12777d2d9f0c412 gb|KJ928199| PRGD_OTU027_ddc2a05d99436183d12777d2d9f0c412, putative proteorhodopsin gene, partial cds. PRGD_OTU027_ddc2a05d99436183d12777d2d9f0c412, putative proteorhodopsin gene, partial cds. KJ928199 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATTACTGTACCGCTACAAATAGTTGAATTTTACCTTATTCTTGCAGCTGTAACTGCGGTAACTAGCGTATTATTCTGGCGACTTCTAGGTGCATCGCTTGTGATGTTAGTTTTTGGGTTCCTAGGTGAAGCTGGCCTTGTTGATGCTACTATTGGGTTTGTTTTAGGAATGGCTGGCTGGTTATATATCATATATGAAATCTTCGCAGGTGAAGCAGCAAAATTAAGTGAAAACAGCAATAACGCTGGAGGGCAGTTTGCATTCAATACCCTTAGGATAATAGTAACAGTT LITVPLQIVEFYLILAAVTAVTSVLFWRLLGASLVMLVFGFLGEAGLVDATIGFVLGMAGWLYIIYEIFAGEAAKLSENSNNAGGQFAFNTLRIIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTACCGCTACAAATAGTTGAATTTTACCTTATTCTTGCAGCT---------GTA---ACTGCGGTAACTAGC---GTATTA------------------------------------TTCTGGCGA---CTTCTAGGTGCATCGCTTGTGATGTTAGTTTTTGGGTTCCTAGGTGAA---------GCT------------------GGC------CTT---------------------------------GTT------------------------------------------------------------------GATGCT------------------ACTATTGGG---TTTGTTTTAGGAATGGCTGGCTGGTTATATATCATATATGAAATC---------------TTC------GCA---GGTGAAGCAGCAAAATTAAGTGAAAAC------AGC---AATAACGCTGGAGGG---CAG---TTT---GCA---TTC---AAT---ACCCTT---AGGATAATAGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVTS-VL------------FWR-LLGASLVMLVFGFLGE---A------G--L-----------V----------------------DA------TIG-FVLGMAGWLYIIYEI-----F--A-GEAAKLSEN--S-NNAGG-Q-F-A-F-N-TL-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ928192 [unk-euryarch-a] PRGD_OTU027_7816210abef2d7de45fa6b49851df84f gb|KJ928192| PRGD_OTU027_7816210abef2d7de45fa6b49851df84f, putative proteorhodopsin gene, partial cds. PRGD_OTU027_7816210abef2d7de45fa6b49851df84f, putative proteorhodopsin gene, partial cds. KJ928192 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTAGTGACTGTACCATTACAGATAGTGGAGTTTTACCTGATTCTAGCAGCTGTAACAGCTGTAACAAGCATTTTGTTCTGGAGATTATTGGGTGCCTCACTAGTAATGTTGGTATTTGGTTACTTAGGTGAAGCTGGATTGATGGATGTTACTGTTGGTTTTATCATTGGTATGGCTGGCTGGATTTACATCATTTATGAGATCTTTGCTGGAGAAGCTGCGAAGTTAAGCGAGGGTAGTAAAAATGCTGGTGGTCAGTTTGCGTTCAATACGCTCAGGTATATTGTAACTATT LVTVPLQIVEFYLILAAVTAVTSILFWRLLGASLVMLVFGYLGEAGLMDVTVGFIIGMAGWIYIIYEIFAGEAAKLSEGSKNAGGQFAFNTLRYIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGTGACTGTACCATTACAGATAGTGGAGTTTTACCTGATTCTAGCAGCT---------GTA---ACAGCTGTAACAAGC---ATTTTG------------------------------------TTCTGGAGA---TTATTGGGTGCCTCACTAGTAATGTTGGTATTTGGTTACTTAGGTGAA---------GCT------------------GGA------TTG---------------------------------ATG------------------------------------------------------------------GATGTT------------------ACTGTTGGT---TTTATCATTGGTATGGCTGGCTGGATTTACATCATTTATGAGATC---------------TTT------GCT---GGAGAAGCTGCGAAGTTAAGCGAGGGT------AGT---AAAAATGCTGGTGGT---CAG---TTT---GCG---TTC---AAT---ACGCTC---AGGTATATTGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVTVPLQIVEFYLILAA---V-TAVTS-IL------------FWR-LLGASLVMLVFGYLGE---A------G--L-----------M----------------------DV------TVG-FIIGMAGWIYIIYEI-----F--A-GEAAKLSEG--S-KNAGG-Q-F-A-F-N-TL-RYIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ928174 [unk-euryarch-a] PRGD_OTU027_01bbe4ac30f23dc839f6e1f47198b8cc gb|KJ928174| PRGD_OTU027_01bbe4ac30f23dc839f6e1f47198b8cc, putative proteorhodopsin gene, partial cds. PRGD_OTU027_01bbe4ac30f23dc839f6e1f47198b8cc, putative proteorhodopsin gene, partial cds. KJ928174 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTAGTGACTGTACCATTACAGATTGTTGAGTTTTACCTGATTCTAGCAGCTGTAACAGCTGTTACAAGCATTTTATTCTGGAGATTATTGGGTGCCTCACTAGTAATGTTGGTATTTGGTTACCTAGGTGAAGCTGGACTGATGGATGTTACACTTGGTTTCATTATTGGTATGGCTGGCTGGATTTACATCATTTATGAGATTTTTGCTGGAGAAGCTGCGAAGTTAAGCGAGGGTAGTAAAAATGCTGGTGGCCAGTTTGCGTTCAATACGCTCAGATATATTGTAACTATT LVTVPLQIVEFYLILAAVTAVTSILFWRLLGASLVMLVFGYLGEAGLMDVTLGFIIGMAGWIYIIYEIFAGEAAKLSEGSKNAGGQFAFNTLRYIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGTGACTGTACCATTACAGATTGTTGAGTTTTACCTGATTCTAGCAGCT---------GTA---ACAGCTGTTACAAGC---ATTTTA------------------------------------TTCTGGAGA---TTATTGGGTGCCTCACTAGTAATGTTGGTATTTGGTTACCTAGGTGAA---------GCT------------------GGA------CTG---------------------------------ATG------------------------------------------------------------------GATGTT------------------ACACTTGGT---TTCATTATTGGTATGGCTGGCTGGATTTACATCATTTATGAGATT---------------TTT------GCT---GGAGAAGCTGCGAAGTTAAGCGAGGGT------AGT---AAAAATGCTGGTGGC---CAG---TTT---GCG---TTC---AAT---ACGCTC---AGATATATTGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVTVPLQIVEFYLILAA---V-TAVTS-IL------------FWR-LLGASLVMLVFGYLGE---A------G--L-----------M----------------------DV------TLG-FIIGMAGWIYIIYEI-----F--A-GEAAKLSEG--S-KNAGG-Q-F-A-F-N-TL-RYIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ928190 [unk-euryarch-a] PRGD_OTU027_6b7d0f2c2641294378b7e81ddc8e9564 gb|KJ928190| PRGD_OTU027_6b7d0f2c2641294378b7e81ddc8e9564, putative proteorhodopsin gene, partial cds. PRGD_OTU027_6b7d0f2c2641294378b7e81ddc8e9564, putative proteorhodopsin gene, partial cds. KJ928190 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) CTAGTGACTGTACCATTACAGATTGTGGAGTTTTACCTGATTCTAGCAGCTGTAACAGCTGTAACAAGCATTTTATTCTGGAGATTATTGGGTGCCTCACTAGTAATGTTGGTATTTGGTTATCTAGGTGAAGCTGGATTGATGGATGTCACACTTGGTTTCATTATTGGTATGGCTGGCTGGATTTACATCATTTATGAGATCTTTGCTGGAGAAGCTGCGAAGTTAAGCGAGGGTAGTAAAAATGCTGGTGGTCAGTTTGCGTTCAATACGCTCAGATATATCGTAACTATT LVTVPLQIVEFYLILAAVTAVTSILFWRLLGASLVMLVFGYLGEAGLMDVTLGFIIGMAGWIYIIYEIFAGEAAKLSEGSKNAGGQFAFNTLRYIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGTGACTGTACCATTACAGATTGTGGAGTTTTACCTGATTCTAGCAGCT---------GTA---ACAGCTGTAACAAGC---ATTTTA------------------------------------TTCTGGAGA---TTATTGGGTGCCTCACTAGTAATGTTGGTATTTGGTTATCTAGGTGAA---------GCT------------------GGA------TTG---------------------------------ATG------------------------------------------------------------------GATGTC------------------ACACTTGGT---TTCATTATTGGTATGGCTGGCTGGATTTACATCATTTATGAGATC---------------TTT------GCT---GGAGAAGCTGCGAAGTTAAGCGAGGGT------AGT---AAAAATGCTGGTGGT---CAG---TTT---GCG---TTC---AAT---ACGCTC---AGATATATCGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVTVPLQIVEFYLILAA---V-TAVTS-IL------------FWR-LLGASLVMLVFGYLGE---A------G--L-----------M----------------------DV------TLG-FIIGMAGWIYIIYEI-----F--A-GEAAKLSEG--S-KNAGG-Q-F-A-F-N-TL-RYIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ928183 [unk-euryarch-a] PRGD_OTU027_4884ba8f4355ed12ab34bc1d098f0c39 gb|KJ928183| PRGD_OTU027_4884ba8f4355ed12ab34bc1d098f0c39, putative proteorhodopsin gene, partial cds. PRGD_OTU027_4884ba8f4355ed12ab34bc1d098f0c39, putative proteorhodopsin gene, partial cds. KJ928183 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAGTGACTGTACCATTACAGATTGTGGAGTTTTACCTGATTCTAGCAGCTGTAACAGCTGTAACAAGCATTTTATTCTGGAGATTATTAGGTGCCTCACTAGTAATGTTGGTATTTGGTTACCTAGGTGAAGCTGGATTGATGGATGTTACACTTGGTTTCATAATTGGTATGGCTGGCTGGATTTACATCATTTATGAGATCTTTGCTGGAGAAGCTGCGAAATTAAGCGAGGGTAGTAAGAACGCTGGTGGTCAGTTTGCGTTTAACACGCTTAGATATATTGTAACTATA LVTVPLQIVEFYLILAAVTAVTSILFWRLLGASLVMLVFGYLGEAGLMDVTLGFIIGMAGWIYIIYEIFAGEAAKLSEGSKNAGGQFAFNTLRYIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGTGACTGTACCATTACAGATTGTGGAGTTTTACCTGATTCTAGCAGCT---------GTA---ACAGCTGTAACAAGC---ATTTTA------------------------------------TTCTGGAGA---TTATTAGGTGCCTCACTAGTAATGTTGGTATTTGGTTACCTAGGTGAA---------GCT------------------GGA------TTG---------------------------------ATG------------------------------------------------------------------GATGTT------------------ACACTTGGT---TTCATAATTGGTATGGCTGGCTGGATTTACATCATTTATGAGATC---------------TTT------GCT---GGAGAAGCTGCGAAATTAAGCGAGGGT------AGT---AAGAACGCTGGTGGT---CAG---TTT---GCG---TTT---AAC---ACGCTT---AGATATATTGTAACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVTVPLQIVEFYLILAA---V-TAVTS-IL------------FWR-LLGASLVMLVFGYLGE---A------G--L-----------M----------------------DV------TLG-FIIGMAGWIYIIYEI-----F--A-GEAAKLSEG--S-KNAGG-Q-F-A-F-N-TL-RYIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ928180 [unk-euryarch-a] PRGD_OTU027_1d4ae7b94588d8908d5018de80be41ea gb|KJ928180| PRGD_OTU027_1d4ae7b94588d8908d5018de80be41ea, putative proteorhodopsin gene, partial cds. PRGD_OTU027_1d4ae7b94588d8908d5018de80be41ea, putative proteorhodopsin gene, partial cds. KJ928180 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTAGTCACTGTACCATTGCAGATAGTGGAGTTTTATCTGATACTAGCAGCTGTAACAGCTGTAACAAGCATTCTATTCTGGCGATTATTGGGTGCCTCGCTTGTAATGTTGGTATTTGGATATCTTGGTGAAGCTGGTTTGATGGATGTTACAGTTGGTTTTATTATTGGTATGGCTGGCTGGATTTACATCATTTATGAGATCTTTGCTGGAGAAGCCGCGAAATTAAATGAAGGTAGTAAAAACGCTGGCGGTCAGTTTGCGTTCAATACGCTAAGATACATTGTGACTATT LVTVPLQIVEFYLILAAVTAVTSILFWRLLGASLVMLVFGYLGEAGLMDVTVGFIIGMAGWIYIIYEIFAGEAAKLNEGSKNAGGQFAFNTLRYIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGTCACTGTACCATTGCAGATAGTGGAGTTTTATCTGATACTAGCAGCT---------GTA---ACAGCTGTAACAAGC---ATTCTA------------------------------------TTCTGGCGA---TTATTGGGTGCCTCGCTTGTAATGTTGGTATTTGGATATCTTGGTGAA---------GCT------------------GGT------TTG---------------------------------ATG------------------------------------------------------------------GATGTT------------------ACAGTTGGT---TTTATTATTGGTATGGCTGGCTGGATTTACATCATTTATGAGATC---------------TTT------GCT---GGAGAAGCCGCGAAATTAAATGAAGGT------AGT---AAAAACGCTGGCGGT---CAG---TTT---GCG---TTC---AAT---ACGCTA---AGATACATTGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVTVPLQIVEFYLILAA---V-TAVTS-IL------------FWR-LLGASLVMLVFGYLGE---A------G--L-----------M----------------------DV------TVG-FIIGMAGWIYIIYEI-----F--A-GEAAKLNEG--S-KNAGG-Q-F-A-F-N-TL-RYIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ928201 [unk-euryarch-a] PRGD_OTU027_e52d6f64e825a2221828426a553f9f8c gb|KJ928201| PRGD_OTU027_e52d6f64e825a2221828426a553f9f8c, putative proteorhodopsin gene, partial cds. PRGD_OTU027_e52d6f64e825a2221828426a553f9f8c, putative proteorhodopsin gene, partial cds. KJ928201 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTAGTCACTGTACCATTGCAGATAGTGGAGTTTTATCTGATACTAGCAGCTGTAACAGCTGTAACAAGCATTCTATTCTGGCGATTATTGGGTGCCTCGCTTGTAATGTTGGTATTTGGATATCTTGGTGAAGCTGGATTAATGGATGTTACAGTTGGTTTTATTATTGGTATGGCTGGCTGGATTTACATCATTTATGAGATCTTTGCTGGAGAAGCCGCGAAATTAAATGAAGGTAGTAAAAACGCTGGCGGTCAGTTTGCGTTCAATACGCTAAGATACATTGTGACTATT LVTVPLQIVEFYLILAAVTAVTSILFWRLLGASLVMLVFGYLGEAGLMDVTVGFIIGMAGWIYIIYEIFAGEAAKLNEGSKNAGGQFAFNTLRYIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGTCACTGTACCATTGCAGATAGTGGAGTTTTATCTGATACTAGCAGCT---------GTA---ACAGCTGTAACAAGC---ATTCTA------------------------------------TTCTGGCGA---TTATTGGGTGCCTCGCTTGTAATGTTGGTATTTGGATATCTTGGTGAA---------GCT------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------GATGTT------------------ACAGTTGGT---TTTATTATTGGTATGGCTGGCTGGATTTACATCATTTATGAGATC---------------TTT------GCT---GGAGAAGCCGCGAAATTAAATGAAGGT------AGT---AAAAACGCTGGCGGT---CAG---TTT---GCG---TTC---AAT---ACGCTA---AGATACATTGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVTVPLQIVEFYLILAA---V-TAVTS-IL------------FWR-LLGASLVMLVFGYLGE---A------G--L-----------M----------------------DV------TVG-FIIGMAGWIYIIYEI-----F--A-GEAAKLNEG--S-KNAGG-Q-F-A-F-N-TL-RYIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ928196 [unk-euryarch-a] PRGD_OTU027_a0c4e8fe3603302b448e871c0822abba gb|KJ928196| PRGD_OTU027_a0c4e8fe3603302b448e871c0822abba, putative proteorhodopsin gene, partial cds. PRGD_OTU027_a0c4e8fe3603302b448e871c0822abba, putative proteorhodopsin gene, partial cds. KJ928196 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTAGTCACTGTACCATTGCAGATAGTTGAGTTTTATCTGATACTAGCAGCTGTAACAGCTGTAACAAGCATTCTATTCTGGCGATTATTGGGTGCCTCGCTTGTAATGTTGGTATTTGGTTATCTTGGTGAAGCTGGTTTGATGGATGTTACAGTTGGTTTTATTATTGGTATGGCTGGCTGGATATATATCATCTATGAAATCTTTGCTGGAGAAGCTGCGAAATTAAATGAAGGTAGTAAAAACGCTGGCGGTCAGTTTGCGTTCAATACGCTAAGATACATTGTAACCGTT LVTVPLQIVEFYLILAAVTAVTSILFWRLLGASLVMLVFGYLGEAGLMDVTVGFIIGMAGWIYIIYEIFAGEAAKLNEGSKNAGGQFAFNTLRYIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGTCACTGTACCATTGCAGATAGTTGAGTTTTATCTGATACTAGCAGCT---------GTA---ACAGCTGTAACAAGC---ATTCTA------------------------------------TTCTGGCGA---TTATTGGGTGCCTCGCTTGTAATGTTGGTATTTGGTTATCTTGGTGAA---------GCT------------------GGT------TTG---------------------------------ATG------------------------------------------------------------------GATGTT------------------ACAGTTGGT---TTTATTATTGGTATGGCTGGCTGGATATATATCATCTATGAAATC---------------TTT------GCT---GGAGAAGCTGCGAAATTAAATGAAGGT------AGT---AAAAACGCTGGCGGT---CAG---TTT---GCG---TTC---AAT---ACGCTA---AGATACATTGTAACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVTVPLQIVEFYLILAA---V-TAVTS-IL------------FWR-LLGASLVMLVFGYLGE---A------G--L-----------M----------------------DV------TVG-FIIGMAGWIYIIYEI-----F--A-GEAAKLNEG--S-KNAGG-Q-F-A-F-N-TL-RYIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ928182 [unk-euryarch-a] PRGD_OTU027_371bff03eb4227b5acfe4c7b104036bb gb|KJ928182| PRGD_OTU027_371bff03eb4227b5acfe4c7b104036bb, putative proteorhodopsin gene, partial cds. PRGD_OTU027_371bff03eb4227b5acfe4c7b104036bb, putative proteorhodopsin gene, partial cds. KJ928182 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTAGTCACTGTACCATTGCAGATAGTGGAGTTTTATCTGATACTAGCAGCTGTAACAGCTGTAACAAGCATTCTATTCTGGCGATTATTGGGTGCCTCGCTTGTAATGTTGATATTTGGTTATCTTGGTGAAGCCGGTTTGATGGATGTTACCGTTGGTTTTATTATTGGTATGGCTGGCTGGATTTACATCATTTATGAGATCTTTGCTGGAGAAGCTGCTAAATTAAGCGAAGGTAGCAAAAATGCTGGTGGTCAGTTTGCGTTTAATACGCTTAGGTATATTGTAACTATT LVTVPLQIVEFYLILAAVTAVTSILFWRLLGASLVMLIFGYLGEAGLMDVTVGFIIGMAGWIYIIYEIFAGEAAKLSEGSKNAGGQFAFNTLRYIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGTCACTGTACCATTGCAGATAGTGGAGTTTTATCTGATACTAGCAGCT---------GTA---ACAGCTGTAACAAGC---ATTCTA------------------------------------TTCTGGCGA---TTATTGGGTGCCTCGCTTGTAATGTTGATATTTGGTTATCTTGGTGAA---------GCC------------------GGT------TTG---------------------------------ATG------------------------------------------------------------------GATGTT------------------ACCGTTGGT---TTTATTATTGGTATGGCTGGCTGGATTTACATCATTTATGAGATC---------------TTT------GCT---GGAGAAGCTGCTAAATTAAGCGAAGGT------AGC---AAAAATGCTGGTGGT---CAG---TTT---GCG---TTT---AAT---ACGCTT---AGGTATATTGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVTVPLQIVEFYLILAA---V-TAVTS-IL------------FWR-LLGASLVMLIFGYLGE---A------G--L-----------M----------------------DV------TVG-FIIGMAGWIYIIYEI-----F--A-GEAAKLSEG--S-KNAGG-Q-F-A-F-N-TL-RYIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ928191 [unk-euryarch-a] PRGD_OTU027_6d2d1dc17cc3e65a532514b37ed70d22 gb|KJ928191| PRGD_OTU027_6d2d1dc17cc3e65a532514b37ed70d22, putative proteorhodopsin gene, partial cds. PRGD_OTU027_6d2d1dc17cc3e65a532514b37ed70d22, putative proteorhodopsin gene, partial cds. KJ928191 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTAGTCACTGTACCATTGCAGATAGTGGAGTTTTATCTGATACTAGCAGCTGTAACAGCTGTAACAAGCATTCTATTCTGGCGATTATTGGGTGCCTCGCTTGTAATGTTGGTATTTGGTTATCTTGGTGAAGCTGGTTTGATGGATGTTACAGTTGGTTTTATTATTGGTATGGCTGGCTGGATTTATATCATTTATGAGATCTTTGCTGGAGAAGCTGCGAAATTAAGCGAAGGTAGTAAAAATGCTGGTGGTCAGTTTGCGTTTAATACGCTCAGATATATTGTAACTATT LVTVPLQIVEFYLILAAVTAVTSILFWRLLGASLVMLVFGYLGEAGLMDVTVGFIIGMAGWIYIIYEIFAGEAAKLSEGSKNAGGQFAFNTLRYIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGTCACTGTACCATTGCAGATAGTGGAGTTTTATCTGATACTAGCAGCT---------GTA---ACAGCTGTAACAAGC---ATTCTA------------------------------------TTCTGGCGA---TTATTGGGTGCCTCGCTTGTAATGTTGGTATTTGGTTATCTTGGTGAA---------GCT------------------GGT------TTG---------------------------------ATG------------------------------------------------------------------GATGTT------------------ACAGTTGGT---TTTATTATTGGTATGGCTGGCTGGATTTATATCATTTATGAGATC---------------TTT------GCT---GGAGAAGCTGCGAAATTAAGCGAAGGT------AGT---AAAAATGCTGGTGGT---CAG---TTT---GCG---TTT---AAT---ACGCTC---AGATATATTGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVTVPLQIVEFYLILAA---V-TAVTS-IL------------FWR-LLGASLVMLVFGYLGE---A------G--L-----------M----------------------DV------TVG-FIIGMAGWIYIIYEI-----F--A-GEAAKLSEG--S-KNAGG-Q-F-A-F-N-TL-RYIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ928198 [unk-euryarch-a] PRGD_OTU027_d627c922c4ddabf345a0ca04c3751801 gb|KJ928198| PRGD_OTU027_d627c922c4ddabf345a0ca04c3751801, putative proteorhodopsin gene, partial cds. PRGD_OTU027_d627c922c4ddabf345a0ca04c3751801, putative proteorhodopsin gene, partial cds. KJ928198 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (76.3333, 14.8833) TTAGTCACTGTACCATTGCAGATAGTGGAGTTTTACTTGATTTTAGCAGCAGTAACAGCTGTAACAAGCACGTTATTCTGGAGATTATTAGGTGCCTCATTAGTAATGCTCGTATTTGGTTATCTTGGTGAAGCTGGGTTGATGGATGTTACTGTTGGTTTTATCATTGGTATGGCTGGCTGGATTTACATCATTTATGAGATCTTTGCTGGAGAGGCTGCGAAATTGAGTGAAGACAGTAAAAATGCTGGTGGTCAGTTTGCATTCAATACGCTGAGACTTATTGTTACTGTA LVTVPLQIVEFYLILAAVTAVTSTLFWRLLGASLVMLVFGYLGEAGLMDVTVGFIIGMAGWIYIIYEIFAGEAAKLSEDSKNAGGQFAFNTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGTCACTGTACCATTGCAGATAGTGGAGTTTTACTTGATTTTAGCAGCA---------GTA---ACAGCTGTAACAAGC---ACGTTA------------------------------------TTCTGGAGA---TTATTAGGTGCCTCATTAGTAATGCTCGTATTTGGTTATCTTGGTGAA---------GCT------------------GGG------TTG---------------------------------ATG------------------------------------------------------------------GATGTT------------------ACTGTTGGT---TTTATCATTGGTATGGCTGGCTGGATTTACATCATTTATGAGATC---------------TTT------GCT---GGAGAGGCTGCGAAATTGAGTGAAGAC------AGT---AAAAATGCTGGTGGT---CAG---TTT---GCA---TTC---AAT---ACGCTG---AGACTTATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVTVPLQIVEFYLILAA---V-TAVTS-TL------------FWR-LLGASLVMLVFGYLGE---A------G--L-----------M----------------------DV------TVG-FIIGMAGWIYIIYEI-----F--A-GEAAKLSED--S-KNAGG-Q-F-A-F-N-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ928189 [unk-euryarch-a] PRGD_OTU027_60570ed254a2f771dd4581ec09957c47 gb|KJ928189| PRGD_OTU027_60570ed254a2f771dd4581ec09957c47, putative proteorhodopsin gene, partial cds. PRGD_OTU027_60570ed254a2f771dd4581ec09957c47, putative proteorhodopsin gene, partial cds. KJ928189 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTAATCACTGTGCCATTACAAATTGTAGAGTTCTACTTGATTCTAGCTGCTGTAACAGCAGTAACAAGTGTTTTATTCTGGCGTTTGTTGGGTGCATCATTAGTTATGTTGGTATTTGGTTTCTTAGGAGAAGCAGGATTAATGGATGTTACTGTCGGCTTTATCATTGGTATGGCAGGCTGGATATATATCATATATGAGATCTTTGCTGGAGAGGCAGCTAAACTAAGTGAGGATAGTAAAAACGCTGGCGGTCAGTTTGCGTTTAATACGCTTAGATTAATTGTAACTGTA LITVPLQIVEFYLILAAVTAVTSVLFWRLLGASLVMLVFGFLGEAGLMDVTVGFIIGMAGWIYIIYEIFAGEAAKLSEDSKNAGGQFAFNTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACTGTGCCATTACAAATTGTAGAGTTCTACTTGATTCTAGCTGCT---------GTA---ACAGCAGTAACAAGT---GTTTTA------------------------------------TTCTGGCGT---TTGTTGGGTGCATCATTAGTTATGTTGGTATTTGGTTTCTTAGGAGAA---------GCA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------GATGTT------------------ACTGTCGGC---TTTATCATTGGTATGGCAGGCTGGATATATATCATATATGAGATC---------------TTT------GCT---GGAGAGGCAGCTAAACTAAGTGAGGAT------AGT---AAAAACGCTGGCGGT---CAG---TTT---GCG---TTT---AAT---ACGCTT---AGATTAATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVTS-VL------------FWR-LLGASLVMLVFGFLGE---A------G--L-----------M----------------------DV------TVG-FIIGMAGWIYIIYEI-----F--A-GEAAKLSED--S-KNAGG-Q-F-A-F-N-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ928176 [unk-euryarch-a] PRGD_OTU027_0ed7bd2c61118bf6770e15d5427d587d gb|KJ928176| PRGD_OTU027_0ed7bd2c61118bf6770e15d5427d587d, putative proteorhodopsin gene, partial cds. PRGD_OTU027_0ed7bd2c61118bf6770e15d5427d587d, putative proteorhodopsin gene, partial cds. KJ928176 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTAATCACTGTGCCACTACAAATTGTAGAATTCTACTTGATTCTAGCTGCTGTAACAGCAGTAACAAGTGTTCTATTCTGGCGTTTGTTAGGTGCATCACTAGTTATGTTAGTATTTGGTTTCTTAGGAGAAGCAGGATTAATGGATGTTACTGTCGGCTTTATCATTGGTATGGCAGGCTGGATATATATCATATACGAGATCTTTGCTGGAGAAGCTGCGAAATTGAGTGAAGACAGTAAGAACGCTGGAGGTCAGTTTGCGTTTAATACGCTTAGACTTATAGTAACTGTT LITVPLQIVEFYLILAAVTAVTSVLFWRLLGASLVMLVFGFLGEAGLMDVTVGFIIGMAGWIYIIYEIFAGEAAKLSEDSKNAGGQFAFNTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACTGTGCCACTACAAATTGTAGAATTCTACTTGATTCTAGCTGCT---------GTA---ACAGCAGTAACAAGT---GTTCTA------------------------------------TTCTGGCGT---TTGTTAGGTGCATCACTAGTTATGTTAGTATTTGGTTTCTTAGGAGAA---------GCA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------GATGTT------------------ACTGTCGGC---TTTATCATTGGTATGGCAGGCTGGATATATATCATATACGAGATC---------------TTT------GCT---GGAGAAGCTGCGAAATTGAGTGAAGAC------AGT---AAGAACGCTGGAGGT---CAG---TTT---GCG---TTT---AAT---ACGCTT---AGACTTATAGTAACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVTS-VL------------FWR-LLGASLVMLVFGFLGE---A------G--L-----------M----------------------DV------TVG-FIIGMAGWIYIIYEI-----F--A-GEAAKLSED--S-KNAGG-Q-F-A-F-N-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ928195 [unk-euryarch-a] PRGD_OTU027_a00feeee2749355b7053d7a15a014c85 gb|KJ928195| PRGD_OTU027_a00feeee2749355b7053d7a15a014c85, putative proteorhodopsin gene, partial cds. PRGD_OTU027_a00feeee2749355b7053d7a15a014c85, putative proteorhodopsin gene, partial cds. KJ928195 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTAATCACTGTGCCACTACAAATTGTAGAATTCTACTTGATTCTAGCTGCTGTAACAGCAGTAACAAGTGTTCTATTCTGGCGTTTGTTAGGTGCATCATTAGTTATGTTAGTATTTGGTTTCTTAGGAGAAGCAGGATTAATGGATGTTACTGTCGGCTTTATCATTGGTATGGCAGGCTGGATATATATCATATACGAGATCTTTGCTGGAGAAGCTGCGAAATTGAGTGAAGACAGTAAGAACGCTGGGGGTCAGTTTGCGTTTAATACGCTTAGACTTATAGTAACTGTT LITVPLQIVEFYLILAAVTAVTSVLFWRLLGASLVMLVFGFLGEAGLMDVTVGFIIGMAGWIYIIYEIFAGEAAKLSEDSKNAGGQFAFNTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACTGTGCCACTACAAATTGTAGAATTCTACTTGATTCTAGCTGCT---------GTA---ACAGCAGTAACAAGT---GTTCTA------------------------------------TTCTGGCGT---TTGTTAGGTGCATCATTAGTTATGTTAGTATTTGGTTTCTTAGGAGAA---------GCA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------GATGTT------------------ACTGTCGGC---TTTATCATTGGTATGGCAGGCTGGATATATATCATATACGAGATC---------------TTT------GCT---GGAGAAGCTGCGAAATTGAGTGAAGAC------AGT---AAGAACGCTGGGGGT---CAG---TTT---GCG---TTT---AAT---ACGCTT---AGACTTATAGTAACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVTS-VL------------FWR-LLGASLVMLVFGFLGE---A------G--L-----------M----------------------DV------TVG-FIIGMAGWIYIIYEI-----F--A-GEAAKLSED--S-KNAGG-Q-F-A-F-N-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ928184 [unk-euryarch-a] PRGD_OTU027_511799b4c258d59bf6fdae5ab79259bb gb|KJ928184| PRGD_OTU027_511799b4c258d59bf6fdae5ab79259bb, putative proteorhodopsin gene, partial cds. PRGD_OTU027_511799b4c258d59bf6fdae5ab79259bb, putative proteorhodopsin gene, partial cds. KJ928184 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATCACTGTACCATTACAAATTGTAGAGTTCTACTTGATTTTAGCCGCTGTAACAGCAGTAACAAGTGTTTTGTTTTGGCGTTTGTTAGGTGCATCATTAGTCATGCTTGTATTTGGTTTTTTAGGAGAAGCTGGATTAGTAGATGTTACTGTAGGTTTTATACTTGGTATGGCAGGCTGGATTTACATCATTTATGAGATCTTTGCCGGAGAGGCTGCTAAATTAAGCGAAGGCAGCAAAAACGCAGGAGGTCAGTTTGCGTTCAATACGCTCAGACTAATCGTAACAGTT LITVPLQIVEFYLILAAVTAVTSVLFWRLLGASLVMLVFGFLGEAGLVDVTVGFILGMAGWIYIIYEIFAGEAAKLSEGSKNAGGQFAFNTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACTGTACCATTACAAATTGTAGAGTTCTACTTGATTTTAGCCGCT---------GTA---ACAGCAGTAACAAGT---GTTTTG------------------------------------TTTTGGCGT---TTGTTAGGTGCATCATTAGTCATGCTTGTATTTGGTTTTTTAGGAGAA---------GCT------------------GGA------TTA---------------------------------GTA------------------------------------------------------------------GATGTT------------------ACTGTAGGT---TTTATACTTGGTATGGCAGGCTGGATTTACATCATTTATGAGATC---------------TTT------GCC---GGAGAGGCTGCTAAATTAAGCGAAGGC------AGC---AAAAACGCAGGAGGT---CAG---TTT---GCG---TTC---AAT---ACGCTC---AGACTAATCGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVTS-VL------------FWR-LLGASLVMLVFGFLGE---A------G--L-----------V----------------------DV------TVG-FILGMAGWIYIIYEI-----F--A-GEAAKLSEG--S-KNAGG-Q-F-A-F-N-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ928185 [unk-euryarch-a] PRGD_OTU027_5526e8a29a44f35b711c2974c27fd45f gb|KJ928185| PRGD_OTU027_5526e8a29a44f35b711c2974c27fd45f, putative proteorhodopsin gene, partial cds. PRGD_OTU027_5526e8a29a44f35b711c2974c27fd45f, putative proteorhodopsin gene, partial cds. KJ928185 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTAATCACTGTGCCATTACAAATTGTAGAGTTCTACTTGATTCTAGCCGCTGTAACAGCGGTAACAAGTGTTCTGTTTTGGCGTTTGTTAGGTGCATCATTAGTCATGCTTGTATTTGGCTTTCTAGGAGAAGCTGGATTAGTAGATGCTACTGTAGGCTTTATACTTGGTATGGCTGGCTGGATTTACATCATTTATGAAATCTTTGCTGGAGAGGCTGCTAAATTAAGCGAAGGCAGCAAAAATGCAGGAGGTCAGTTTGCGTTCAATACGCTCAGACTAATCGTAACAGTT LITVPLQIVEFYLILAAVTAVTSVLFWRLLGASLVMLVFGFLGEAGLVDATVGFILGMAGWIYIIYEIFAGEAAKLSEGSKNAGGQFAFNTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACTGTGCCATTACAAATTGTAGAGTTCTACTTGATTCTAGCCGCT---------GTA---ACAGCGGTAACAAGT---GTTCTG------------------------------------TTTTGGCGT---TTGTTAGGTGCATCATTAGTCATGCTTGTATTTGGCTTTCTAGGAGAA---------GCT------------------GGA------TTA---------------------------------GTA------------------------------------------------------------------GATGCT------------------ACTGTAGGC---TTTATACTTGGTATGGCTGGCTGGATTTACATCATTTATGAAATC---------------TTT------GCT---GGAGAGGCTGCTAAATTAAGCGAAGGC------AGC---AAAAATGCAGGAGGT---CAG---TTT---GCG---TTC---AAT---ACGCTC---AGACTAATCGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVTS-VL------------FWR-LLGASLVMLVFGFLGE---A------G--L-----------V----------------------DA------TVG-FILGMAGWIYIIYEI-----F--A-GEAAKLSEG--S-KNAGG-Q-F-A-F-N-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ928175 [unk-euryarch-a] PRGD_OTU027_026c2728c20c5e2cb749d62a0be8a966 gb|KJ928175| PRGD_OTU027_026c2728c20c5e2cb749d62a0be8a966, putative proteorhodopsin gene, partial cds. PRGD_OTU027_026c2728c20c5e2cb749d62a0be8a966, putative proteorhodopsin gene, partial cds. KJ928175 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTAATTACTGTGCCATTACAAATTGTAGAGTTCTACTTGATTTTAGCCGCTGTAACAGCGGTAACAAGTGTTCTATTTTGGCGTTTGTTAGGTGCATCATTAGTTATGCTTGTATTTGGTTTCTTAGGAGAAGCTGGATTAGTGGATGCAACTGTAGGCTTTATCCTTGGTATGGCTGGCTGGATTTACATCATTTATGAGATCTTTGCTGGAGAGGCTGCAAGCCTAAGTGAAGGTAGTAAAAACGCAGGAGGTCAGTTTGCTTTCAATACGCTCAGGCTAATTGTAACAGTT LITVPLQIVEFYLILAAVTAVTSVLFWRLLGASLVMLVFGFLGEAGLVDATVGFILGMAGWIYIIYEIFAGEAASLSEGSKNAGGQFAFNTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTGCCATTACAAATTGTAGAGTTCTACTTGATTTTAGCCGCT---------GTA---ACAGCGGTAACAAGT---GTTCTA------------------------------------TTTTGGCGT---TTGTTAGGTGCATCATTAGTTATGCTTGTATTTGGTTTCTTAGGAGAA---------GCT------------------GGA------TTA---------------------------------GTG------------------------------------------------------------------GATGCA------------------ACTGTAGGC---TTTATCCTTGGTATGGCTGGCTGGATTTACATCATTTATGAGATC---------------TTT------GCT---GGAGAGGCTGCAAGCCTAAGTGAAGGT------AGT---AAAAACGCAGGAGGT---CAG---TTT---GCT---TTC---AAT---ACGCTC---AGGCTAATTGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVTS-VL------------FWR-LLGASLVMLVFGFLGE---A------G--L-----------V----------------------DA------TVG-FILGMAGWIYIIYEI-----F--A-GEAASLSEG--S-KNAGG-Q-F-A-F-N-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ928186 [unk-euryarch-a] PRGD_OTU027_582caec7da1d32ec5bcf82b39f54e752 gb|KJ928186| PRGD_OTU027_582caec7da1d32ec5bcf82b39f54e752, putative proteorhodopsin gene, partial cds. PRGD_OTU027_582caec7da1d32ec5bcf82b39f54e752, putative proteorhodopsin gene, partial cds. KJ928186 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) CTAATCACTGTGCCATTACAAATCGTTGAGTTCTACTTGATTCTAGCCGCTGTAACAGCAGTAACAAGTGTTTTATTTTGGCGTTTGTTAGGTGCATCATTAGTTATGCTTGTATTTGGTTTCTTAGGAGAAGCTGGATTAGTGGATGCAACTGTAGGTTTTATCCTTGGTATGGCTGGCTGGATTTATATCATTTATGAGATCTTTGCTGGAGAAGCTGCAAAACTAAGTGAAGGCAGTGCAAATGCAGGAGGTCAGTTTGCGTTTAATACGCTCAGACTAATTGTAACAGTT LITVPLQIVEFYLILAAVTAVTSVLFWRLLGASLVMLVFGFLGEAGLVDATVGFILGMAGWIYIIYEIFAGEAAKLSEGSANAGGQFAFNTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACTGTGCCATTACAAATCGTTGAGTTCTACTTGATTCTAGCCGCT---------GTA---ACAGCAGTAACAAGT---GTTTTA------------------------------------TTTTGGCGT---TTGTTAGGTGCATCATTAGTTATGCTTGTATTTGGTTTCTTAGGAGAA---------GCT------------------GGA------TTA---------------------------------GTG------------------------------------------------------------------GATGCA------------------ACTGTAGGT---TTTATCCTTGGTATGGCTGGCTGGATTTATATCATTTATGAGATC---------------TTT------GCT---GGAGAAGCTGCAAAACTAAGTGAAGGC------AGT---GCAAATGCAGGAGGT---CAG---TTT---GCG---TTT---AAT---ACGCTC---AGACTAATTGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVTS-VL------------FWR-LLGASLVMLVFGFLGE---A------G--L-----------V----------------------DA------TVG-FILGMAGWIYIIYEI-----F--A-GEAAKLSEG--S-ANAGG-Q-F-A-F-N-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ928178 [unk-euryarch-a] PRGD_OTU027_19072fef958b19b6d7c3cac6cf4d9fe3 gb|KJ928178| PRGD_OTU027_19072fef958b19b6d7c3cac6cf4d9fe3, putative proteorhodopsin gene, partial cds. PRGD_OTU027_19072fef958b19b6d7c3cac6cf4d9fe3, putative proteorhodopsin gene, partial cds. KJ928178 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683) CTAATCACTGTGCCATTGCAAATTGTAGAGTTCTACTTGATTCTAGCTGCTGTGACAGCAGTAACAAGCGTTTTATTTTGGCGTTTGTTAGGTGCATCATTAGTTATGCTTGTGTTTGGTTTCTTAGGGGAAGCTGGATTAGTTGATGTAACCGTAGGCTTTGTCCTTGGTATGGCTGGCTGGATTTACATCATTTATGAGATCTTTGCTGGAGAAGCTGCGAAATTGAGTGAAGACAGTAAAAATGCTGGTGGTCAGTTTGCATTCAATACGCTAAGACTGATCGTAACAGTT LITVPLQIVEFYLILAAVTAVTSVLFWRLLGASLVMLVFGFLGEAGLVDVTVGFVLGMAGWIYIIYEIFAGEAAKLSEDSKNAGGQFAFNTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACTGTGCCATTGCAAATTGTAGAGTTCTACTTGATTCTAGCTGCT---------GTG---ACAGCAGTAACAAGC---GTTTTA------------------------------------TTTTGGCGT---TTGTTAGGTGCATCATTAGTTATGCTTGTGTTTGGTTTCTTAGGGGAA---------GCT------------------GGA------TTA---------------------------------GTT------------------------------------------------------------------GATGTA------------------ACCGTAGGC---TTTGTCCTTGGTATGGCTGGCTGGATTTACATCATTTATGAGATC---------------TTT------GCT---GGAGAAGCTGCGAAATTGAGTGAAGAC------AGT---AAAAATGCTGGTGGT---CAG---TTT---GCA---TTC---AAT---ACGCTA---AGACTGATCGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVTS-VL------------FWR-LLGASLVMLVFGFLGE---A------G--L-----------V----------------------DV------TVG-FVLGMAGWIYIIYEI-----F--A-GEAAKLSED--S-KNAGG-Q-F-A-F-N-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ928173 [unk-euryarch-a] PRGD_OTU027_otuREP_cf33c43adeb1d59fbf2b96e13848fd74 gb|KJ928173| PRGD_OTU027_otuREP_cf33c43adeb1d59fbf2b96e13848fd74, putative proteorhodopsin gene, partial cds. PRGD_OTU027_otuREP_cf33c43adeb1d59fbf2b96e13848fd74, putative proteorhodopsin gene, partial cds. KJ928173 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATCACTGTGCCATTGCAAATTGTAGAGTTCTACTTGATTCTAGCTGCTGTGACAGCAGTAACAAGCGTTTTATTTTGGCGTTTGTTAGGTGCATCATTGGTTATGCTTGTATTTGGTTTCTTAGGGGAAGCTGGATTAGTTGATGTAACCGTAGGCTTTGTCCTTGGTATGGCTGGCTGGATTTACATCATTTATGAGATCTTTGCTGGAGAAGCTGCGAAATTGAGTGAAGACAGTAAAAATGCTGGTGGTCAGTTTGCATTCAATACACTAAGACTGATCGTAACAGTT LITVPLQIVEFYLILAAVTAVTSVLFWRLLGASLVMLVFGFLGEAGLVDVTVGFVLGMAGWIYIIYEIFAGEAAKLSEDSKNAGGQFAFNTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACTGTGCCATTGCAAATTGTAGAGTTCTACTTGATTCTAGCTGCT---------GTG---ACAGCAGTAACAAGC---GTTTTA------------------------------------TTTTGGCGT---TTGTTAGGTGCATCATTGGTTATGCTTGTATTTGGTTTCTTAGGGGAA---------GCT------------------GGA------TTA---------------------------------GTT------------------------------------------------------------------GATGTA------------------ACCGTAGGC---TTTGTCCTTGGTATGGCTGGCTGGATTTACATCATTTATGAGATC---------------TTT------GCT---GGAGAAGCTGCGAAATTGAGTGAAGAC------AGT---AAAAATGCTGGTGGT---CAG---TTT---GCA---TTC---AAT---ACACTA---AGACTGATCGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVTS-VL------------FWR-LLGASLVMLVFGFLGE---A------G--L-----------V----------------------DV------TVG-FVLGMAGWIYIIYEI-----F--A-GEAAKLSED--S-KNAGG-Q-F-A-F-N-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ928202 [unk-euryarch-a] PRGD_OTU027_f60a7b7889f07033c5ec02f0b4e91fa3 gb|KJ928202| PRGD_OTU027_f60a7b7889f07033c5ec02f0b4e91fa3, putative proteorhodopsin gene, partial cds. PRGD_OTU027_f60a7b7889f07033c5ec02f0b4e91fa3, putative proteorhodopsin gene, partial cds. KJ928202 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-35.05, 23.73) CTAATCACTGTGCCATTGCAAATTGTAGAGTTCTACTTGATTCTAGCTGCTGTGACAGCAGTAACAAGCGTTTTATTTTGGCGTTTGTTAGGTGCATCGTTGGTTATGCTTGTATTTGGTTTCTTAGGGGAAGCTGGATTAGTTGATGTAACCGTAGGCTTTGTCCTCGGTATGGCTGGCTGGATTTACATCATTTATGAGATCTTTGCTGGAGAAGCTGCGAAATTGAGTGAAGACAGTAAAAATGCTGGTGGTCAGTTTGCATTCAATACGCTGAGACTTATTGTTACTGTA LITVPLQIVEFYLILAAVTAVTSVLFWRLLGASLVMLVFGFLGEAGLVDVTVGFVLGMAGWIYIIYEIFAGEAAKLSEDSKNAGGQFAFNTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACTGTGCCATTGCAAATTGTAGAGTTCTACTTGATTCTAGCTGCT---------GTG---ACAGCAGTAACAAGC---GTTTTA------------------------------------TTTTGGCGT---TTGTTAGGTGCATCGTTGGTTATGCTTGTATTTGGTTTCTTAGGGGAA---------GCT------------------GGA------TTA---------------------------------GTT------------------------------------------------------------------GATGTA------------------ACCGTAGGC---TTTGTCCTCGGTATGGCTGGCTGGATTTACATCATTTATGAGATC---------------TTT------GCT---GGAGAAGCTGCGAAATTGAGTGAAGAC------AGT---AAAAATGCTGGTGGT---CAG---TTT---GCA---TTC---AAT---ACGCTG---AGACTTATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVTS-VL------------FWR-LLGASLVMLVFGFLGE---A------G--L-----------V----------------------DV------TVG-FVLGMAGWIYIIYEI-----F--A-GEAAKLSED--S-KNAGG-Q-F-A-F-N-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ928194 [unk-euryarch-a] PRGD_OTU027_9860d404cd5dc5c212396f8a28eff0e8 gb|KJ928194| PRGD_OTU027_9860d404cd5dc5c212396f8a28eff0e8, putative proteorhodopsin gene, partial cds. PRGD_OTU027_9860d404cd5dc5c212396f8a28eff0e8, putative proteorhodopsin gene, partial cds. KJ928194 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTAATCACTGTGCCATTACAAATCGTAGAGTTCTACTTGATTTTAGCCGCTGTAACAGCAGTAACAAGTGTTTTATTTTGGCGTTTGTTAGGTGCATCATTAGTTATGCTTGTATTTGGTTTCTTAGGAGAAGCTGGATTAGTTGATGTAACTGTAGGCTTTATCCTTGGTATGGCTGGCTGGATTTACATCATTTATGAGATTTTTGCTGGAGAAGCAGCTAAATTGAGTGAAGATAGTAAAAATGCTGGTGGTCAGTTTGCTTTCAATACACTTAGACTGATTGTAACAGTT LITVPLQIVEFYLILAAVTAVTSVLFWRLLGASLVMLVFGFLGEAGLVDVTVGFILGMAGWIYIIYEIFAGEAAKLSEDSKNAGGQFAFNTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACTGTGCCATTACAAATCGTAGAGTTCTACTTGATTTTAGCCGCT---------GTA---ACAGCAGTAACAAGT---GTTTTA------------------------------------TTTTGGCGT---TTGTTAGGTGCATCATTAGTTATGCTTGTATTTGGTTTCTTAGGAGAA---------GCT------------------GGA------TTA---------------------------------GTT------------------------------------------------------------------GATGTA------------------ACTGTAGGC---TTTATCCTTGGTATGGCTGGCTGGATTTACATCATTTATGAGATT---------------TTT------GCT---GGAGAAGCAGCTAAATTGAGTGAAGAT------AGT---AAAAATGCTGGTGGT---CAG---TTT---GCT---TTC---AAT---ACACTT---AGACTGATTGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVTS-VL------------FWR-LLGASLVMLVFGFLGE---A------G--L-----------V----------------------DV------TVG-FILGMAGWIYIIYEI-----F--A-GEAAKLSED--S-KNAGG-Q-F-A-F-N-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ929761 [unk-euryarch-a] PRGD_OTU232_1674dee938a11505114c2ee0fb5f7d80 gb|KJ929761| PRGD_OTU232_1674dee938a11505114c2ee0fb5f7d80, putative proteorhodopsin gene, partial cds. PRGD_OTU232_1674dee938a11505114c2ee0fb5f7d80, putative proteorhodopsin gene, partial cds. KJ929761 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCATCACAGTCCCACTACAGATAGTAGAATTTTATTTGATTTTGCTAGCAGTAACCGCAGTCAGTAGTGGATTGTTCTGGAGATTGCTCGGCGCTTCACTTGTGATGTTAATTTTTGGATTCTTAGGTGAAGCTGGGCTTATGGATTCCACCATAGCGTTCGTTCCAGGGATGGCAGGGTGGCTCTACATCCTCTATGAGATTTTCTCAGGTGAGGCAGCGAGTCTGAGCAGTAACAGCCAAAATCTAGGAGGTCAGTTTGCCTTTAATACACTCAGAATAATAGTAACAGCT LITVPLQIVEFYLILLAVTAVSSGLFWRLLGASLVMLIFGFLGEAGLMDSTIAFVPGMAGWLYILYEIFSGEAASLSSNSQNLGGQFAFNTLRIIVTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTCCCACTACAGATAGTAGAATTTTATTTGATTTTGCTAGCA---------GTA---ACCGCAGTCAGTAGT---GGATTG------------------------------------TTCTGGAGA---TTGCTCGGCGCTTCACTTGTGATGTTAATTTTTGGATTCTTAGGTGAA---------GCT------------------GGG------CTT---------------------------------ATG------------------------------------------------------------------GATTCC------------------ACCATAGCG---TTCGTTCCAGGGATGGCAGGGTGGCTCTACATCCTCTATGAGATT---------------TTC------TCA---GGTGAGGCAGCGAGTCTGAGCAGTAAC------AGC---CAAAATCTAGGAGGT---CAG---TTT---GCC---TTT---AAT---ACACTC---AGAATAATAGTAACAGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILLA---V-TAVSS-GL------------FWR-LLGASLVMLIFGFLGE---A------G--L-----------M----------------------DS------TIA-FVPGMAGWLYILYEI-----F--S-GEAASLSSN--S-QNLGG-Q-F-A-F-N-TL-RIIVTA-------------------------------------------------------------------------------------------------------------------------------- [unk-euryarch-a]_KJ929760 [unk-euryarch-a] PRGD_OTU232_otuREP_c6b01005f0eeff7397e6dbaaec9e7c4c gb|KJ929760| PRGD_OTU232_otuREP_c6b01005f0eeff7397e6dbaaec9e7c4c, putative proteorhodopsin gene, partial cds. PRGD_OTU232_otuREP_c6b01005f0eeff7397e6dbaaec9e7c4c, putative proteorhodopsin gene, partial cds. KJ929760 [[proteorhodopsin/euryarcheaeal-like/A subcluster]] proteorhodopsin euryarcheaeal-like A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATCACAGTTCCACTTCAAATAGTCGAGTTTTACCTGATTCTATTAGCGGTCACAGCAGTCAGCAGCGGCCTATTTTGGAGATTACTTGGCGCTTCTCTTGTTATGTTAATATTTGGATTTTTAGGTGAAGCTGGGTTAATGAATTCAACAATTGCATTCATTCCAGGCATGGCAGGATGGATTTATATACTTTACGAAATCTTTTCCGGAGAGGCAGCAGGTCTAAGCGCAAATAGCAAAAATCCTGGTGGTCAATTTGCTTTCAATACATTAAAATGGATTGTAACAGCG LITVPLQIVEFYLILLAVTAVSSGLFWRLLGASLVMLIFGFLGEAGLMNSTIAFIPGMAGWIYILYEIFSGEAAGLSANSKNPGGQFAFNTLKWIVTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCACAGTTCCACTTCAAATAGTCGAGTTTTACCTGATTCTATTAGCG---------GTC---ACAGCAGTCAGCAGC---GGCCTA------------------------------------TTTTGGAGA---TTACTTGGCGCTTCTCTTGTTATGTTAATATTTGGATTTTTAGGTGAA---------GCT------------------GGG------TTA---------------------------------ATG------------------------------------------------------------------AATTCA------------------ACAATTGCA---TTCATTCCAGGCATGGCAGGATGGATTTATATACTTTACGAAATC---------------TTT------TCC---GGAGAGGCAGCAGGTCTAAGCGCAAAT------AGC---AAAAATCCTGGTGGT---CAA---TTT---GCT---TTC---AAT---ACATTA---AAATGGATTGTAACAGCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILLA---V-TAVSS-GL------------FWR-LLGASLVMLIFGFLGE---A------G--L-----------M----------------------NS------TIA-FIPGMAGWIYILYEI-----F--S-GEAAGLSAN--S-KNPGG-Q-F-A-F-N-TL-KWIVTA-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928739 [II-CFB-MS024] PRGD_OTU050_350b4bbd697e5506bf75e5a6190395ca gb|KJ928739| PRGD_OTU050_350b4bbd697e5506bf75e5a6190395ca, putative proteorhodopsin gene, partial cds. PRGD_OTU050_350b4bbd697e5506bf75e5a6190395ca, putative proteorhodopsin gene, partial cds. KJ928739 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) ATCTTAACTGTTCCATTGATGTGTGTTGAGTTTTATCTTCTTCTCAAAGTAGCAGGAGCTACTACAAAGCACCTTCGTGATTTAATTGTATTATCACTTATCATGCTTATCACTGGTTATGTTGGTGAGGCAGGAATGGGTAATGCTGCACTTTGGGGTCTGTTTTCAGGTTTAGCTTATTTTGCAATCGTCTACATGATCAAATATGGAGACCTTTCAAAACTTGCAAAGTCTGCTGGAGGTTCAGTTGAAAAAGCACACAACACTCTATTCTGGTTTGTACTCGTA ILTVPLMCVEFYLLLKVAGATTKHLRDLIVLSLIMLITGYVGEAGMGNAALWGLFSGLAYFAIVYMIKYGDLSKLAKSAGGSVEKAHNTLFWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAACTGTTCCATTGATGTGTGTTGAGTTTTATCTTCTTCTCAAAGTA---------GCA------GGAGCTACTACA---AAGCAC------------------------------------CTTCGTGAT---TTAATTGTATTATCACTTATCATGCTTATCACTGGTTATGTTGGTGAG---------GCA------------------GGA------ATGGGT---------------------------------------------------------------------------------------------------AATGCT------------------GCACTTTGG---GGTCTGTTTTCAGGTTTAGCTTATTTTGCAATCGTCTACATGATC---------------AAA------TAT---GGAGACCTTTCAAAACTTGCAAAGTCT------GCT---GGAGGTTCA---GTT---GAA---AAA---GCA---CAC---AAC---ACTCTA---TTCTGGTTTGTACTCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLLKV---A--GATT-KH------------LRD-LIVLSLIMLITGYVGE---A------G--MG---------------------------------NA------ALW-GLFSGLAYFAIVYMI-----K--Y-GDLSKLAKS--A-GGS-V-E-K-A-H-N-TL-FWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928740 [II-CFB-MS024] PRGD_OTU050_3cee4853e26931970e6ed2cbf291ae8d gb|KJ928740| PRGD_OTU050_3cee4853e26931970e6ed2cbf291ae8d, putative proteorhodopsin gene, partial cds. PRGD_OTU050_3cee4853e26931970e6ed2cbf291ae8d, putative proteorhodopsin gene, partial cds. KJ928740 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -33.9602, -73.3769), Arctic Ocean-Atlantic side (73.9992, 19.2097), Arctic Ocean-Pacific side (70.9139, -128.9264; ; ; 67.49, -168.12), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) ATCTTAACTGTTCCATTGATGTGTGTTGAGTTTTATCTTCTTCTCAAAGTAGCAGGAGCTACTACAAAACACCTTCGTGATTTAATTGTATTATCACTTATCATGCTTATCACTGGATATGTTGGTGAGGCAGGAATGGGTAATGCTGCACTTTGGGGTCTGTTTTCAGGTTTAGCTTATTTTGCAATCGTCTACATGATCAAATATGGAGACCTTTCAAAACTTGCAAAGTCTGCTGGAGGTTCAGTTGAAAAAGCACACAACACTCTATTCTGGTTTGTACTCGTA ILTVPLMCVEFYLLLKVAGATTKHLRDLIVLSLIMLITGYVGEAGMGNAALWGLFSGLAYFAIVYMIKYGDLSKLAKSAGGSVEKAHNTLFWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAACTGTTCCATTGATGTGTGTTGAGTTTTATCTTCTTCTCAAAGTA---------GCA------GGAGCTACTACA---AAACAC------------------------------------CTTCGTGAT---TTAATTGTATTATCACTTATCATGCTTATCACTGGATATGTTGGTGAG---------GCA------------------GGA------ATGGGT---------------------------------------------------------------------------------------------------AATGCT------------------GCACTTTGG---GGTCTGTTTTCAGGTTTAGCTTATTTTGCAATCGTCTACATGATC---------------AAA------TAT---GGAGACCTTTCAAAACTTGCAAAGTCT------GCT---GGAGGTTCA---GTT---GAA---AAA---GCA---CAC---AAC---ACTCTA---TTCTGGTTTGTACTCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLLKV---A--GATT-KH------------LRD-LIVLSLIMLITGYVGE---A------G--MG---------------------------------NA------ALW-GLFSGLAYFAIVYMI-----K--Y-GDLSKLAKS--A-GGS-V-E-K-A-H-N-TL-FWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928748 [II-CFB-MS024] PRGD_OTU050_c1bd2d304e002838b8902f0a35c59bca gb|KJ928748| PRGD_OTU050_c1bd2d304e002838b8902f0a35c59bca, putative proteorhodopsin gene, partial cds. PRGD_OTU050_c1bd2d304e002838b8902f0a35c59bca, putative proteorhodopsin gene, partial cds. KJ928748 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Pacific side (72.0542, -130.8781), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508) ATCTTAACTGTTCCATTGATGTGTGTTGAGTTTTATCTTCTTCTCAAAGTTGCAGGAGCTACAACAAAGCACCTTCGTGATTTAATTGTATTATCACTTATCATGCTTATCACTGGTTATGTTGGTGAGGCAGGAATGGGTAATGCTGCACTTTGGGGTCTATTTTCAGGTGTAGCTTATTTTGCAATCGTCTACATGATCAAATATGGAGACCTTTCAAAACTTGCAAAATCTGCTGGAGGTTCAGTTGAAAAAGCACACAACACTCTATTCTGGTTTGTACTCGTA ILTVPLMCVEFYLLLKVAGATTKHLRDLIVLSLIMLITGYVGEAGMGNAALWGLFSGVAYFAIVYMIKYGDLSKLAKSAGGSVEKAHNTLFWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAACTGTTCCATTGATGTGTGTTGAGTTTTATCTTCTTCTCAAAGTT---------GCA------GGAGCTACAACA---AAGCAC------------------------------------CTTCGTGAT---TTAATTGTATTATCACTTATCATGCTTATCACTGGTTATGTTGGTGAG---------GCA------------------GGA------ATGGGT---------------------------------------------------------------------------------------------------AATGCT------------------GCACTTTGG---GGTCTATTTTCAGGTGTAGCTTATTTTGCAATCGTCTACATGATC---------------AAA------TAT---GGAGACCTTTCAAAACTTGCAAAATCT------GCT---GGAGGTTCA---GTT---GAA---AAA---GCA---CAC---AAC---ACTCTA---TTCTGGTTTGTACTCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLLKV---A--GATT-KH------------LRD-LIVLSLIMLITGYVGE---A------G--MG---------------------------------NA------ALW-GLFSGVAYFAIVYMI-----K--Y-GDLSKLAKS--A-GGS-V-E-K-A-H-N-TL-FWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928744 [II-CFB-MS024] PRGD_OTU050_6c7ed1588852c396a97c3c1f010424a5 gb|KJ928744| PRGD_OTU050_6c7ed1588852c396a97c3c1f010424a5, putative proteorhodopsin gene, partial cds. PRGD_OTU050_6c7ed1588852c396a97c3c1f010424a5, putative proteorhodopsin gene, partial cds. KJ928744 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATCTTAACTGTTCCATTGATGTGTGTTGAGTTTTATCTTCTTCTCAAAGTAGCAGGAGCTACAACAAAGCACCTTCGTAATTTAATTGTATTGTCACTTATTATGCTTGTCACTGGTTATGTTGGTGAGGCAGGAATGGGTAATGCTGCACTTTGGGGTCTGTTTTCAGGTGCAGCATATTTTGCAATCGTCTACATGATTAAATATGGAGACCTTTCAAAACTTGCAAAGTCTGCTGGAGGTTCAGTTGAAAAAGCACACAACACTTTATTCTGGTTTGTACTAGTA ILTVPLMCVEFYLLLKVAGATTKHLRNLIVLSLIMLVTGYVGEAGMGNAALWGLFSGAAYFAIVYMIKYGDLSKLAKSAGGSVEKAHNTLFWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAACTGTTCCATTGATGTGTGTTGAGTTTTATCTTCTTCTCAAAGTA---------GCA------GGAGCTACAACA---AAGCAC------------------------------------CTTCGTAAT---TTAATTGTATTGTCACTTATTATGCTTGTCACTGGTTATGTTGGTGAG---------GCA------------------GGA------ATGGGT---------------------------------------------------------------------------------------------------AATGCT------------------GCACTTTGG---GGTCTGTTTTCAGGTGCAGCATATTTTGCAATCGTCTACATGATT---------------AAA------TAT---GGAGACCTTTCAAAACTTGCAAAGTCT------GCT---GGAGGTTCA---GTT---GAA---AAA---GCA---CAC---AAC---ACTTTA---TTCTGGTTTGTACTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLLKV---A--GATT-KH------------LRN-LIVLSLIMLVTGYVGE---A------G--MG---------------------------------NA------ALW-GLFSGAAYFAIVYMI-----K--Y-GDLSKLAKS--A-GGS-V-E-K-A-H-N-TL-FWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928746 [II-CFB-MS024] PRGD_OTU050_9021c0fce8f447606a26bb5e3e55d982 gb|KJ928746| PRGD_OTU050_9021c0fce8f447606a26bb5e3e55d982, putative proteorhodopsin gene, partial cds. PRGD_OTU050_9021c0fce8f447606a26bb5e3e55d982, putative proteorhodopsin gene, partial cds. KJ928746 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) ATCTTAACTGTTCCATTGATGTGTGTTGAGTTTTATCTTCTTTTGAAAGTAGCAGGAGCTACAACTAAGCACCTTCGTGATTTAATTGTACTTTCACTTGTTATGCTTATCACTGGTTATGTTGGTGAAGCAGGAATGGGTAATGCTGCACTTTGGGGTCTGTTTTCAGGTTTGGCATACTTTGCAATCGTCTACATGATAAAATATGGAGACCTTTCAAAACTTGCAAAGTCTGCTGGAGGTTCAGTTGAAAAAGCACACAACACTTTGTTCTGGTTTGTTCTGGTA ILTVPLMCVEFYLLLKVAGATTKHLRDLIVLSLVMLITGYVGEAGMGNAALWGLFSGLAYFAIVYMIKYGDLSKLAKSAGGSVEKAHNTLFWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAACTGTTCCATTGATGTGTGTTGAGTTTTATCTTCTTTTGAAAGTA---------GCA------GGAGCTACAACT---AAGCAC------------------------------------CTTCGTGAT---TTAATTGTACTTTCACTTGTTATGCTTATCACTGGTTATGTTGGTGAA---------GCA------------------GGA------ATGGGT---------------------------------------------------------------------------------------------------AATGCT------------------GCACTTTGG---GGTCTGTTTTCAGGTTTGGCATACTTTGCAATCGTCTACATGATA---------------AAA------TAT---GGAGACCTTTCAAAACTTGCAAAGTCT------GCT---GGAGGTTCA---GTT---GAA---AAA---GCA---CAC---AAC---ACTTTG---TTCTGGTTTGTTCTGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLLKV---A--GATT-KH------------LRD-LIVLSLVMLITGYVGE---A------G--MG---------------------------------NA------ALW-GLFSGLAYFAIVYMI-----K--Y-GDLSKLAKS--A-GGS-V-E-K-A-H-N-TL-FWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928750 [II-CFB-MS024] PRGD_OTU050_d6d30b1d0e52c265c6066d22f011c3b3 gb|KJ928750| PRGD_OTU050_d6d30b1d0e52c265c6066d22f011c3b3, putative proteorhodopsin gene, partial cds. PRGD_OTU050_d6d30b1d0e52c265c6066d22f011c3b3, putative proteorhodopsin gene, partial cds. KJ928750 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683) ATCTTAACTGTTCCATTGATGTGTGTTGAGTTTTATCTTCTTTTGAAAGTAGCAGGAGCTACAACTAAGCACCTTCGTGATTTAATTGTACTTTCACTTGTTATGCTTATCACTGGTTATGTTGGTGAAGCAGGAATGGGTAATGCTGCACTTTGGGGACTGTTTTCAGGTTTAGCATACTTTGCAATCGTCTACATGATAAAATATGGAGACCTTTCAAAACTTGCAAAGTCTGCTGGGGGTTCAGTTGAAAAAGCACACAACACTTTGTTCTGGTTTGTACTTGTA ILTVPLMCVEFYLLLKVAGATTKHLRDLIVLSLVMLITGYVGEAGMGNAALWGLFSGLAYFAIVYMIKYGDLSKLAKSAGGSVEKAHNTLFWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAACTGTTCCATTGATGTGTGTTGAGTTTTATCTTCTTTTGAAAGTA---------GCA------GGAGCTACAACT---AAGCAC------------------------------------CTTCGTGAT---TTAATTGTACTTTCACTTGTTATGCTTATCACTGGTTATGTTGGTGAA---------GCA------------------GGA------ATGGGT---------------------------------------------------------------------------------------------------AATGCT------------------GCACTTTGG---GGACTGTTTTCAGGTTTAGCATACTTTGCAATCGTCTACATGATA---------------AAA------TAT---GGAGACCTTTCAAAACTTGCAAAGTCT------GCT---GGGGGTTCA---GTT---GAA---AAA---GCA---CAC---AAC---ACTTTG---TTCTGGTTTGTACTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLLKV---A--GATT-KH------------LRD-LIVLSLVMLITGYVGE---A------G--MG---------------------------------NA------ALW-GLFSGLAYFAIVYMI-----K--Y-GDLSKLAKS--A-GGS-V-E-K-A-H-N-TL-FWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928747 [II-CFB-MS024] PRGD_OTU050_be708b2017794264b7be27ba994b3e62 gb|KJ928747| PRGD_OTU050_be708b2017794264b7be27ba994b3e62, putative proteorhodopsin gene, partial cds. PRGD_OTU050_be708b2017794264b7be27ba994b3e62, putative proteorhodopsin gene, partial cds. KJ928747 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-14.48, 113.45) ATCTTAACTGTTCCATTGATGTGTGTTGAGTTTTATCTTCTTCTCAAAGTAGCAGGAGCTACAACTAAGCACCTTCGTGATTTAATTTTACTTTCACTTGCTATGCTTATCTTTGGTTATGTTGGTGAAGCAGGAATGGGTAATGCTGCACTTTGGGGTCTGTTTTCAGGTATAGCATACTTTGCAATCGTCTACATGATAAAATATGGAGACCTTTCAAAACTTGCAAAGTCTGCTGGAGGTTCAGTTGAAAAAGCACACAACACTTTATTCTGGTTTGTACTGGTA ILTVPLMCVEFYLLLKVAGATTKHLRDLILLSLAMLIFGYVGEAGMGNAALWGLFSGIAYFAIVYMIKYGDLSKLAKSAGGSVEKAHNTLFWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAACTGTTCCATTGATGTGTGTTGAGTTTTATCTTCTTCTCAAAGTA---------GCA------GGAGCTACAACT---AAGCAC------------------------------------CTTCGTGAT---TTAATTTTACTTTCACTTGCTATGCTTATCTTTGGTTATGTTGGTGAA---------GCA------------------GGA------ATGGGT---------------------------------------------------------------------------------------------------AATGCT------------------GCACTTTGG---GGTCTGTTTTCAGGTATAGCATACTTTGCAATCGTCTACATGATA---------------AAA------TAT---GGAGACCTTTCAAAACTTGCAAAGTCT------GCT---GGAGGTTCA---GTT---GAA---AAA---GCA---CAC---AAC---ACTTTA---TTCTGGTTTGTACTGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLLKV---A--GATT-KH------------LRD-LILLSLAMLIFGYVGE---A------G--MG---------------------------------NA------ALW-GLFSGIAYFAIVYMI-----K--Y-GDLSKLAKS--A-GGS-V-E-K-A-H-N-TL-FWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928738 [II-CFB-MS024] PRGD_OTU050_otuREP_36e24efb0c79cbe21baf888a91d4b65c gb|KJ928738| PRGD_OTU050_otuREP_36e24efb0c79cbe21baf888a91d4b65c, putative proteorhodopsin gene, partial cds. PRGD_OTU050_otuREP_36e24efb0c79cbe21baf888a91d4b65c, putative proteorhodopsin gene, partial cds. KJ928738 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.935 18.508 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45; -33.28, 45.35) ATCTTAACTGTTCCATTGATGTGTGTTGAGTTTTATCTTCTTCTCAAAGTAGCAGGAGCTACAACAAAGCACCTTCGTGATTTAATTGTATTGTCACTTGTAATGCTTATCACTGGTTATGTTGGTGAAGCAGGAATGGGTAACGCTGCACTTTGGGGTCTATTTTCAGGTTTAGCATATTTTGCAATCGTCTACATGATCAAATATGGAGACCTTTCAAAACTTGCAAAGTCTGCTGGAGGTTCAGTTGAAAAAGCACACAACACTCTATTCTGGTTTGTACTCGTA ILTVPLMCVEFYLLLKVAGATTKHLRDLIVLSLVMLITGYVGEAGMGNAALWGLFSGLAYFAIVYMIKYGDLSKLAKSAGGSVEKAHNTLFWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAACTGTTCCATTGATGTGTGTTGAGTTTTATCTTCTTCTCAAAGTA---------GCA------GGAGCTACAACA---AAGCAC------------------------------------CTTCGTGAT---TTAATTGTATTGTCACTTGTAATGCTTATCACTGGTTATGTTGGTGAA---------GCA------------------GGA------ATGGGT---------------------------------------------------------------------------------------------------AACGCT------------------GCACTTTGG---GGTCTATTTTCAGGTTTAGCATATTTTGCAATCGTCTACATGATC---------------AAA------TAT---GGAGACCTTTCAAAACTTGCAAAGTCT------GCT---GGAGGTTCA---GTT---GAA---AAA---GCA---CAC---AAC---ACTCTA---TTCTGGTTTGTACTCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLLKV---A--GATT-KH------------LRD-LIVLSLVMLITGYVGE---A------G--MG---------------------------------NA------ALW-GLFSGLAYFAIVYMI-----K--Y-GDLSKLAKS--A-GGS-V-E-K-A-H-N-TL-FWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928741 [II-CFB-MS024] PRGD_OTU050_40696c682ea97ca726cd659cc8a93305 gb|KJ928741| PRGD_OTU050_40696c682ea97ca726cd659cc8a93305, putative proteorhodopsin gene, partial cds. PRGD_OTU050_40696c682ea97ca726cd659cc8a93305, putative proteorhodopsin gene, partial cds. KJ928741 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) ATCCTTACGGTTCCATTGATGTGTGTTGAGTTCTATCTTCTTTTGAAAGTAGCTGGAGCTACCACAAAACACCTTCGTGATCTAATCGTGTTGTCCTTGGTAATGCTTATCACTGGTTATGTTGGTGAGGCAGGAATGGGTAATGCTGCGCTTTGGGGTCTATTTTCAGGTTTAGCATATTTTGCAATCGTCTACATGATCAAGTATGGAGACCTTTCAAAACTTGCCAAGTCTGCTGGAGGTGCAGTAGAAAAAGCACACAATACCTTATTCTGGTTTGTACTTGTA ILTVPLMCVEFYLLLKVAGATTKHLRDLIVLSLVMLITGYVGEAGMGNAALWGLFSGLAYFAIVYMIKYGDLSKLAKSAGGAVEKAHNTLFWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCTTACGGTTCCATTGATGTGTGTTGAGTTCTATCTTCTTTTGAAAGTA---------GCT------GGAGCTACCACA---AAACAC------------------------------------CTTCGTGAT---CTAATCGTGTTGTCCTTGGTAATGCTTATCACTGGTTATGTTGGTGAG---------GCA------------------GGA------ATGGGT---------------------------------------------------------------------------------------------------AATGCT------------------GCGCTTTGG---GGTCTATTTTCAGGTTTAGCATATTTTGCAATCGTCTACATGATC---------------AAG------TAT---GGAGACCTTTCAAAACTTGCCAAGTCT------GCT---GGAGGTGCA---GTA---GAA---AAA---GCA---CAC---AAT---ACCTTA---TTCTGGTTTGTACTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLLKV---A--GATT-KH------------LRD-LIVLSLVMLITGYVGE---A------G--MG---------------------------------NA------ALW-GLFSGLAYFAIVYMI-----K--Y-GDLSKLAKS--A-GGA-V-E-K-A-H-N-TL-FWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928749 [II-CFB-MS024] PRGD_OTU050_cf1bc66a49668326ef229a5d9cf37ebf gb|KJ928749| PRGD_OTU050_cf1bc66a49668326ef229a5d9cf37ebf, putative proteorhodopsin gene, partial cds. PRGD_OTU050_cf1bc66a49668326ef229a5d9cf37ebf, putative proteorhodopsin gene, partial cds. KJ928749 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) ATCCTTACGGTTCCATTGATGTGTGTTGAGTTCTATCTTCTTTTGAAAGTAGCTGGAGCTACTACAAAACACCTTCGTGATCTAATCGTGTTGTCCTTGGTAATGCTAATCACTGGTTATGTTGGTGAGGCAGGAATGGGTAACGCTGCGCTTTGGGGTCTATTTTCAGGTTTAGCATATTTTGCAATCGTCTACATGATCAAGTATGGAGACCTTTCAAAACTTGCCAAGTCTGCTGGAGGTGCAGTAGAAAAAGCACACAACACCTTATTCTGGTTTGTACTTGTA ILTVPLMCVEFYLLLKVAGATTKHLRDLIVLSLVMLITGYVGEAGMGNAALWGLFSGLAYFAIVYMIKYGDLSKLAKSAGGAVEKAHNTLFWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCTTACGGTTCCATTGATGTGTGTTGAGTTCTATCTTCTTTTGAAAGTA---------GCT------GGAGCTACTACA---AAACAC------------------------------------CTTCGTGAT---CTAATCGTGTTGTCCTTGGTAATGCTAATCACTGGTTATGTTGGTGAG---------GCA------------------GGA------ATGGGT---------------------------------------------------------------------------------------------------AACGCT------------------GCGCTTTGG---GGTCTATTTTCAGGTTTAGCATATTTTGCAATCGTCTACATGATC---------------AAG------TAT---GGAGACCTTTCAAAACTTGCCAAGTCT------GCT---GGAGGTGCA---GTA---GAA---AAA---GCA---CAC---AAC---ACCTTA---TTCTGGTTTGTACTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLLKV---A--GATT-KH------------LRD-LIVLSLVMLITGYVGE---A------G--MG---------------------------------NA------ALW-GLFSGLAYFAIVYMI-----K--Y-GDLSKLAKS--A-GGA-V-E-K-A-H-N-TL-FWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928754 [II-CFB-MS024] PRGD_OTU050_f5e5066d9568fee5ee2fa0f0622f50e9 gb|KJ928754| PRGD_OTU050_f5e5066d9568fee5ee2fa0f0622f50e9, putative proteorhodopsin gene, partial cds. PRGD_OTU050_f5e5066d9568fee5ee2fa0f0622f50e9, putative proteorhodopsin gene, partial cds. KJ928754 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) ATTCTTACGGTTCCATTGATGTGTGTTGAATTCTATCTTCTTTTGAAAGTAGCTGGAGCTACAACAAAACACCTTCGTGACTTAATCGTGTTGTCTTTGGTAATGCTTATCACTGGCTATGTTGGTGAGGCAGGAATGGGTAACGCTGCACTTTGGGGTCTATTTTCAGGTCTAGCATATTTTGCAATCGTCTACATGATCAAGTATGGAGACCTTTCAAAACTTGCCAAGTCTGCTGGAGGAGCAGTAGAAAAAGCACACAACACCTTGTTCTGGTTTGTACTTGTA ILTVPLMCVEFYLLLKVAGATTKHLRDLIVLSLVMLITGYVGEAGMGNAALWGLFSGLAYFAIVYMIKYGDLSKLAKSAGGAVEKAHNTLFWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTACGGTTCCATTGATGTGTGTTGAATTCTATCTTCTTTTGAAAGTA---------GCT------GGAGCTACAACA---AAACAC------------------------------------CTTCGTGAC---TTAATCGTGTTGTCTTTGGTAATGCTTATCACTGGCTATGTTGGTGAG---------GCA------------------GGA------ATGGGT---------------------------------------------------------------------------------------------------AACGCT------------------GCACTTTGG---GGTCTATTTTCAGGTCTAGCATATTTTGCAATCGTCTACATGATC---------------AAG------TAT---GGAGACCTTTCAAAACTTGCCAAGTCT------GCT---GGAGGAGCA---GTA---GAA---AAA---GCA---CAC---AAC---ACCTTG---TTCTGGTTTGTACTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLLKV---A--GATT-KH------------LRD-LIVLSLVMLITGYVGE---A------G--MG---------------------------------NA------ALW-GLFSGLAYFAIVYMI-----K--Y-GDLSKLAKS--A-GGA-V-E-K-A-H-N-TL-FWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928752 [II-CFB-MS024] PRGD_OTU050_e0a5b4b50445f06113b7a395e9fbddb2 gb|KJ928752| PRGD_OTU050_e0a5b4b50445f06113b7a395e9fbddb2, putative proteorhodopsin gene, partial cds. PRGD_OTU050_e0a5b4b50445f06113b7a395e9fbddb2, putative proteorhodopsin gene, partial cds. KJ928752 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATCCTTACGGTTCCATTGATGTGTGTTGAATTCTATCTTCTTTTGAAAGTAGCTGGAGCTACAACAAAACACCTTCGTGATTTAATTTTGTTGTCCTTGGTAATGCTAATCACTGGTTATGTTGGTGAGGCAGGAATGGGTAACGCTGCTCTTTGGGGTCTATTTTCAGGTTTAGCATATTTTGCAATAGTTTACATGATCAAGTATGGAGACCTTTCAAAACTTGCTAAGTCTGCTGGAGGTTCAGTAGAAAAAGCACACAACACCTTATTCTGGTTTGTGCTTGTA ILTVPLMCVEFYLLLKVAGATTKHLRDLILLSLVMLITGYVGEAGMGNAALWGLFSGLAYFAIVYMIKYGDLSKLAKSAGGSVEKAHNTLFWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCTTACGGTTCCATTGATGTGTGTTGAATTCTATCTTCTTTTGAAAGTA---------GCT------GGAGCTACAACA---AAACAC------------------------------------CTTCGTGAT---TTAATTTTGTTGTCCTTGGTAATGCTAATCACTGGTTATGTTGGTGAG---------GCA------------------GGA------ATGGGT---------------------------------------------------------------------------------------------------AACGCT------------------GCTCTTTGG---GGTCTATTTTCAGGTTTAGCATATTTTGCAATAGTTTACATGATC---------------AAG------TAT---GGAGACCTTTCAAAACTTGCTAAGTCT------GCT---GGAGGTTCA---GTA---GAA---AAA---GCA---CAC---AAC---ACCTTA---TTCTGGTTTGTGCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLLKV---A--GATT-KH------------LRD-LILLSLVMLITGYVGE---A------G--MG---------------------------------NA------ALW-GLFSGLAYFAIVYMI-----K--Y-GDLSKLAKS--A-GGS-V-E-K-A-H-N-TL-FWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928753 [II-CFB-MS024] PRGD_OTU050_ed4370e466dac626f22f8cd0d616b264 gb|KJ928753| PRGD_OTU050_ed4370e466dac626f22f8cd0d616b264, putative proteorhodopsin gene, partial cds. PRGD_OTU050_ed4370e466dac626f22f8cd0d616b264, putative proteorhodopsin gene, partial cds. KJ928753 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) ATTCTCACGGTTCCATTAATGTGTGTTGAGTTTTATCTTCTTTTGAAAGTAGCTGGAGCTACAACAAAACACCTTCGTGACTTAATCGTGTTGTCCTTAGTAATGCTAATCACTGGTTACGTTGGTGAGGCAGGAATGGGTAACGCTGCGCTTTGGGGTCTATTCTCAGGTTTAGCTTATTTTGCAATCGTCTACATGATTAAATATGGAGACCTTTCAAAACTTGCCAAGTCTGCTGGAGGTTCAGTCGAAAAAGCACACAATACTTTATTTTGGTTTGTATTAGTT ILTVPLMCVEFYLLLKVAGATTKHLRDLIVLSLVMLITGYVGEAGMGNAALWGLFSGLAYFAIVYMIKYGDLSKLAKSAGGSVEKAHNTLFWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTCACGGTTCCATTAATGTGTGTTGAGTTTTATCTTCTTTTGAAAGTA---------GCT------GGAGCTACAACA---AAACAC------------------------------------CTTCGTGAC---TTAATCGTGTTGTCCTTAGTAATGCTAATCACTGGTTACGTTGGTGAG---------GCA------------------GGA------ATGGGT---------------------------------------------------------------------------------------------------AACGCT------------------GCGCTTTGG---GGTCTATTCTCAGGTTTAGCTTATTTTGCAATCGTCTACATGATT---------------AAA------TAT---GGAGACCTTTCAAAACTTGCCAAGTCT------GCT---GGAGGTTCA---GTC---GAA---AAA---GCA---CAC---AAT---ACTTTA---TTTTGGTTTGTATTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLLKV---A--GATT-KH------------LRD-LIVLSLVMLITGYVGE---A------G--MG---------------------------------NA------ALW-GLFSGLAYFAIVYMI-----K--Y-GDLSKLAKS--A-GGS-V-E-K-A-H-N-TL-FWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928742 [II-CFB-MS024] PRGD_OTU050_4f18f2bab580099e09e223258dcfe7b2 gb|KJ928742| PRGD_OTU050_4f18f2bab580099e09e223258dcfe7b2, putative proteorhodopsin gene, partial cds. PRGD_OTU050_4f18f2bab580099e09e223258dcfe7b2, putative proteorhodopsin gene, partial cds. KJ928742 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) ATATTAACAGTGCCATTAATGTGTGTTGAGTTTTATCTTCTTCTTAAAGTAGCAGGAGCTACAACAAAACACCTTCGCGATCTTATTGTGTTGTCCTTAATAATGCTAATCACTGGTTATGTTGGTGAAGCAGGAATGGGCAATGCTGCGCTTTGGGGTCTATTTTCAGGTTTAGCATATTTTGCAATTGTCTATATGATCAAATATGGAGAGCTTGCAAAGCTTGCGAAGTCTGCTGGAGGTTCAGTTGAGAAAGCACATAATACCTTGTTTTGGTTTGTATTTGTT ILTVPLMCVEFYLLLKVAGATTKHLRDLIVLSLIMLITGYVGEAGMGNAALWGLFSGLAYFAIVYMIKYGELAKLAKSAGGSVEKAHNTLFWFVFV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTAACAGTGCCATTAATGTGTGTTGAGTTTTATCTTCTTCTTAAAGTA---------GCA------GGAGCTACAACA---AAACAC------------------------------------CTTCGCGAT---CTTATTGTGTTGTCCTTAATAATGCTAATCACTGGTTATGTTGGTGAA---------GCA------------------GGA------ATGGGC---------------------------------------------------------------------------------------------------AATGCT------------------GCGCTTTGG---GGTCTATTTTCAGGTTTAGCATATTTTGCAATTGTCTATATGATC---------------AAA------TAT---GGAGAGCTTGCAAAGCTTGCGAAGTCT------GCT---GGAGGTTCA---GTT---GAG---AAA---GCA---CAT---AAT---ACCTTG---TTTTGGTTTGTATTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLLKV---A--GATT-KH------------LRD-LIVLSLIMLITGYVGE---A------G--MG---------------------------------NA------ALW-GLFSGLAYFAIVYMI-----K--Y-GELAKLAKS--A-GGS-V-E-K-A-H-N-TL-FWFVFV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928745 [II-CFB-MS024] PRGD_OTU050_7de223ae7ee90753ca660ba3435f6fa4 gb|KJ928745| PRGD_OTU050_7de223ae7ee90753ca660ba3435f6fa4, putative proteorhodopsin gene, partial cds. PRGD_OTU050_7de223ae7ee90753ca660ba3435f6fa4, putative proteorhodopsin gene, partial cds. KJ928745 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45) ATATTAACAGTGCCATTAATGTGTGTTGAGTTTTATCTTCTTCTTAAAGTAGCAGGAGCTACAACAAAACACCTTCGCGATCTTATTGTGTTGTCCTTAATAATGCTAATCACTGGTTATGTTGGTGAAGCAGGAATGGGTGACGCTGCGCTTTGGGGTCTGTTTTCAGGTCTTGCATATTTCGGAATTCTTTACATGATCAAATATGGAGATCTTGCAAAACTTGCAAAGTCTGCTGGTGGTTCAGTTGAGAATGCACACAACACCTTGTTTTGGTTTGTATTTGTA ILTVPLMCVEFYLLLKVAGATTKHLRDLIVLSLIMLITGYVGEAGMGDAALWGLFSGLAYFGILYMIKYGDLAKLAKSAGGSVENAHNTLFWFVFV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTAACAGTGCCATTAATGTGTGTTGAGTTTTATCTTCTTCTTAAAGTA---------GCA------GGAGCTACAACA---AAACAC------------------------------------CTTCGCGAT---CTTATTGTGTTGTCCTTAATAATGCTAATCACTGGTTATGTTGGTGAA---------GCA------------------GGA------ATGGGT---------------------------------------------------------------------------------------------------GACGCT------------------GCGCTTTGG---GGTCTGTTTTCAGGTCTTGCATATTTCGGAATTCTTTACATGATC---------------AAA------TAT---GGAGATCTTGCAAAACTTGCAAAGTCT------GCT---GGTGGTTCA---GTT---GAG---AAT---GCA---CAC---AAC---ACCTTG---TTTTGGTTTGTATTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLLKV---A--GATT-KH------------LRD-LIVLSLIMLITGYVGE---A------G--MG---------------------------------DA------ALW-GLFSGLAYFGILYMI-----K--Y-GDLAKLAKS--A-GGS-V-E-N-A-H-N-TL-FWFVFV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928743 [II-CFB-MS024] PRGD_OTU050_57fac4250b3d15c8bff6389777a1aaac gb|KJ928743| PRGD_OTU050_57fac4250b3d15c8bff6389777a1aaac, putative proteorhodopsin gene, partial cds. PRGD_OTU050_57fac4250b3d15c8bff6389777a1aaac, putative proteorhodopsin gene, partial cds. KJ928743 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) ATCCTTACGGTGCCATTAATGTGCGTTGAGTTTTACCTTATTCTTAAAGTAGCTGGTGCTACTACAACTCTACTTCGTAATCTAATTGTATTATCATTAGTAATGCTGGTTACTGGTTATGTAGGAGAAGCAGGAATGGGCAACGCTGCATTTTGGGGCTTACTTTCAGGTTTAGCATATTTTGCAATTGTGTATATCATTAAGTATGGTGAAGCTGCTAAGTTAGCTAAGTCTGCTGGTGGTGCAGTTGAAAAAGCACACAACACCCTATTCTGGTTTGTACTTGTA ILTVPLMCVEFYLILKVAGATTTLLRNLIVLSLVMLVTGYVGEAGMGNAAFWGLLSGLAYFAIVYIIKYGEAAKLAKSAGGAVEKAHNTLFWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCTTACGGTGCCATTAATGTGCGTTGAGTTTTACCTTATTCTTAAAGTA---------GCT------GGTGCTACTACA---ACTCTA------------------------------------CTTCGTAAT---CTAATTGTATTATCATTAGTAATGCTGGTTACTGGTTATGTAGGAGAA---------GCA------------------GGA------ATGGGC---------------------------------------------AAC---GCT---------------------------------------------------------------------GCATTTTGG---GGCTTACTTTCAGGTTTAGCATATTTTGCAATTGTGTATATCATT---------------AAG------TAT---GGTGAAGCTGCTAAGTTAGCTAAGTCT------GCT---GGTGGTGCA---GTT---GAA---AAA---GCA---CAC---AAC---ACCCTA---TTCTGGTTTGTACTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATT-TL------------LRN-LIVLSLVMLVTGYVGE---A------G--MG---------------N-A-----------------------AFW-GLLSGLAYFAIVYII-----K--Y-GEAAKLAKS--A-GGA-V-E-K-A-H-N-TL-FWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928751 [II-CFB-MS024] PRGD_OTU050_d816dc2edd60f203fe617b36f1906bd1 gb|KJ928751| PRGD_OTU050_d816dc2edd60f203fe617b36f1906bd1, putative proteorhodopsin gene, partial cds. PRGD_OTU050_d816dc2edd60f203fe617b36f1906bd1, putative proteorhodopsin gene, partial cds. KJ928751 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683) ATCCTTACGGTGCCATTAATGTGCGTTGAGTTTTACCTTATTCTTAAAGTAGCTGGCGCTACTACAACTCTACTTCGTAATCTAATTGTATTATCATTAGTAATGCTGGTTACTGGTTATGTAGGAGAAGCAGGAATGGGTAACGCTGCATTTTGGGGCTTACTTTCAGGTTTAGCATATTTTGCAATTGTGTATATCATTAAGTATGGTGAAGCTGCTAAGTTGGCTAAGTCTGCTGGTGGTGCAGTTGAAAAAGCACACAACACCCTATTCTGGTTTGTACTTGTT ILTVPLMCVEFYLILKVAGATTTLLRNLIVLSLVMLVTGYVGEAGMGNAAFWGLLSGLAYFAIVYIIKYGEAAKLAKSAGGAVEKAHNTLFWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCTTACGGTGCCATTAATGTGCGTTGAGTTTTACCTTATTCTTAAAGTA---------GCT------GGCGCTACTACA---ACTCTA------------------------------------CTTCGTAAT---CTAATTGTATTATCATTAGTAATGCTGGTTACTGGTTATGTAGGAGAA---------GCA------------------GGA------ATGGGT---------------------------------------------AAC---GCT---------------------------------------------------------------------GCATTTTGG---GGCTTACTTTCAGGTTTAGCATATTTTGCAATTGTGTATATCATT---------------AAG------TAT---GGTGAAGCTGCTAAGTTGGCTAAGTCT------GCT---GGTGGTGCA---GTT---GAA---AAA---GCA---CAC---AAC---ACCCTA---TTCTGGTTTGTACTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATT-TL------------LRN-LIVLSLVMLVTGYVGE---A------G--MG---------------N-A-----------------------AFW-GLLSGLAYFAIVYII-----K--Y-GEAAKLAKS--A-GGA-V-E-K-A-H-N-TL-FWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929117 [II-CFB-MS024] PRGD_OTU077_3c221041165bfd97d3c140fc1b621b04 gb|KJ929117| PRGD_OTU077_3c221041165bfd97d3c140fc1b621b04, putative proteorhodopsin gene, partial cds. PRGD_OTU077_3c221041165bfd97d3c140fc1b621b04, putative proteorhodopsin gene, partial cds. KJ929117 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) ATCCTTACTGTACCATTAATGTGTGTTGAATTCTATCTAATTTTAAAAGGTGCTGGTGCAACAACCAAACATTTAAAGCATTTAGTAGTAGCTTCTACAATTATGCTTGTTACAGGATATGTTGGTGAAGCTGGCTTAGGAGACGCTGCTCTTTATGGGTTATTCTCTGGTCTAGCATATTTCTACATTGTCTACATGATTAAATTTGGTGAGTTAGCTAAACTTGCAGCTTCTGCGGGTGGCGCAGTTCAATCTGCTCACAACACTTTGTGTTTATTCGTAATTATT ILTVPLMCVEFYLILKGAGATTKHLKHLVVASTIMLVTGYVGEAGLGDAALYGLFSGLAYFYIVYMIKFGELAKLAASAGGAVQSAHNTLCLFVII ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCTTACTGTACCATTAATGTGTGTTGAATTCTATCTAATTTTAAAAGGT---------GCT------GGTGCAACAACC---AAACAT------------------------------------TTAAAGCAT---TTAGTAGTAGCTTCTACAATTATGCTTGTTACAGGATATGTTGGTGAA---------GCT------------------GGC------TTAGGA---------------------------------------------------------------------------------------------------GACGCT------------------GCTCTTTAT---GGGTTATTCTCTGGTCTAGCATATTTCTACATTGTCTACATGATT---------------AAA------TTT---GGTGAGTTAGCTAAACTTGCAGCTTCT------GCG---GGTGGCGCA---GTT---CAA---TCT---GCT---CAC---AAC---ACTTTG---TGTTTATTCGTAATTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKG---A--GATT-KH------------LKH-LVVASTIMLVTGYVGE---A------G--LG---------------------------------DA------ALY-GLFSGLAYFYIVYMI-----K--F-GELAKLAAS--A-GGA-V-Q-S-A-H-N-TL-CLFVII-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929122 [II-CFB-MS024] PRGD_OTU077_ec2ac036343dcc53464a2da6f97a9f92 gb|KJ929122| PRGD_OTU077_ec2ac036343dcc53464a2da6f97a9f92, putative proteorhodopsin gene, partial cds. PRGD_OTU077_ec2ac036343dcc53464a2da6f97a9f92, putative proteorhodopsin gene, partial cds. KJ929122 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) ATACTTACTGTACCATTAATGTGTGTTGAATTCTATCTAATTTTAAAAGGTGCTGGTGCAACAACCAAACATTTAAAGCATTTAGTAGTAGCTTCAACAATTATGCTTGTTACAGGATATGTTGGTGAAGCTGGTTTAGGAGACGCTGCTCTTTGGGGGTTATTCTCTGGTCTAGCATATTTCTACATTGTCTACATGATCAAATTTGGTGAGTTAGCTAAACTTGCAGCTTCTGCGGGTGGCGCAGTTCAATCTGCTCATAACACTTTGTGTTTATTTGTAATTATT ILTVPLMCVEFYLILKGAGATTKHLKHLVVASTIMLVTGYVGEAGLGDAALWGLFSGLAYFYIVYMIKFGELAKLAASAGGAVQSAHNTLCLFVII ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTTACTGTACCATTAATGTGTGTTGAATTCTATCTAATTTTAAAAGGT---------GCT------GGTGCAACAACC---AAACAT------------------------------------TTAAAGCAT---TTAGTAGTAGCTTCAACAATTATGCTTGTTACAGGATATGTTGGTGAA---------GCT------------------GGT------TTAGGA---------------------------------------------------------------------------------------------------GACGCT------------------GCTCTTTGG---GGGTTATTCTCTGGTCTAGCATATTTCTACATTGTCTACATGATC---------------AAA------TTT---GGTGAGTTAGCTAAACTTGCAGCTTCT------GCG---GGTGGCGCA---GTT---CAA---TCT---GCT---CAT---AAC---ACTTTG---TGTTTATTTGTAATTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKG---A--GATT-KH------------LKH-LVVASTIMLVTGYVGE---A------G--LG---------------------------------DA------ALW-GLFSGLAYFYIVYMI-----K--F-GELAKLAAS--A-GGA-V-Q-S-A-H-N-TL-CLFVII-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929120 [II-CFB-MS024] PRGD_OTU077_9f1c24e6c4bf44331ac860d4076205f3 gb|KJ929120| PRGD_OTU077_9f1c24e6c4bf44331ac860d4076205f3, putative proteorhodopsin gene, partial cds. PRGD_OTU077_9f1c24e6c4bf44331ac860d4076205f3, putative proteorhodopsin gene, partial cds. KJ929120 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683) ATACTTACTGTACCATTAATGTGTGTTGAATTCTATCTAATTTTAAAAGGCGCTGGTGCAACAACCAAACATTTAAAGCATTTAGTAGTAGCTTCTACAATTATGCTTGTTACTGGCTATGTTGGTGAAGCTGGCTTAGGAGACGCTGCTCTTTGGGGGTTATTCTCTGGTCTAGCATATTTCTACATTGTCTACATGATCAAATTTGGTGAGTTAGCTAAACTTGCAGCTTCTGCAGGTGGCGCAGTTCAATCTGCTCATAACACTTTGTGTTTATTTGTAATTATT ILTVPLMCVEFYLILKGAGATTKHLKHLVVASTIMLVTGYVGEAGLGDAALWGLFSGLAYFYIVYMIKFGELAKLAASAGGAVQSAHNTLCLFVII ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTTACTGTACCATTAATGTGTGTTGAATTCTATCTAATTTTAAAAGGC---------GCT------GGTGCAACAACC---AAACAT------------------------------------TTAAAGCAT---TTAGTAGTAGCTTCTACAATTATGCTTGTTACTGGCTATGTTGGTGAA---------GCT------------------GGC------TTAGGA---------------------------------------------------------------------------------------------------GACGCT------------------GCTCTTTGG---GGGTTATTCTCTGGTCTAGCATATTTCTACATTGTCTACATGATC---------------AAA------TTT---GGTGAGTTAGCTAAACTTGCAGCTTCT------GCA---GGTGGCGCA---GTT---CAA---TCT---GCT---CAT---AAC---ACTTTG---TGTTTATTTGTAATTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKG---A--GATT-KH------------LKH-LVVASTIMLVTGYVGE---A------G--LG---------------------------------DA------ALW-GLFSGLAYFYIVYMI-----K--F-GELAKLAAS--A-GGA-V-Q-S-A-H-N-TL-CLFVII-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929119 [II-CFB-MS024] PRGD_OTU077_89a566ee6c16870e2cd11fbc22b22d59 gb|KJ929119| PRGD_OTU077_89a566ee6c16870e2cd11fbc22b22d59, putative proteorhodopsin gene, partial cds. PRGD_OTU077_89a566ee6c16870e2cd11fbc22b22d59, putative proteorhodopsin gene, partial cds. KJ929119 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), English Channel (48.7717, -3.9683) ATACTTACTGTACCATTAATGTGTGTTGAATTCTATCTAATTTTAAAAGGTGCTGGTGCAACAACCAAACATTTAAAGCATTTAGTAGTAGCTTCTACAATTATGCTTGTTACTGGATATGTTGGTGAAGCTGGCTTAGGAGACGCTGCTCTTTGGGGATTATTCTCTGGTTTAGCATATTTCTACATTGTCTATATGATCAAATTTGGTGAGTTAGCTAAACTTGCCGCTTCTGCGGGTGGCGCAGTTCAATCTGCTCATAACACTTTATGTTTATTTGTAATTATT ILTVPLMCVEFYLILKGAGATTKHLKHLVVASTIMLVTGYVGEAGLGDAALWGLFSGLAYFYIVYMIKFGELAKLAASAGGAVQSAHNTLCLFVII ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTTACTGTACCATTAATGTGTGTTGAATTCTATCTAATTTTAAAAGGT---------GCT------GGTGCAACAACC---AAACAT------------------------------------TTAAAGCAT---TTAGTAGTAGCTTCTACAATTATGCTTGTTACTGGATATGTTGGTGAA---------GCT------------------GGC------TTAGGA---------------------------------------------------------------------------------------------------GACGCT------------------GCTCTTTGG---GGATTATTCTCTGGTTTAGCATATTTCTACATTGTCTATATGATC---------------AAA------TTT---GGTGAGTTAGCTAAACTTGCCGCTTCT------GCG---GGTGGCGCA---GTT---CAA---TCT---GCT---CAT---AAC---ACTTTA---TGTTTATTTGTAATTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKG---A--GATT-KH------------LKH-LVVASTIMLVTGYVGE---A------G--LG---------------------------------DA------ALW-GLFSGLAYFYIVYMI-----K--F-GELAKLAAS--A-GGA-V-Q-S-A-H-N-TL-CLFVII-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929116 [II-CFB-MS024] PRGD_OTU077_22b70cf371287f735d76a129d65cdc10 gb|KJ929116| PRGD_OTU077_22b70cf371287f735d76a129d65cdc10, putative proteorhodopsin gene, partial cds. PRGD_OTU077_22b70cf371287f735d76a129d65cdc10, putative proteorhodopsin gene, partial cds. KJ929116 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATACTTACTGTACCATTAATGTGTGTTGAATTCTATCTAATTTTAAAAGGTGCTGGTGCAACAACCAAACATTTAAAGCATTTAGTAGTAGCTTCTACAATTATGCTTGTTACTGGATATGTTGGTGAAGCTGGCTTAGGAGACGCTGCTCTTTGGGGATTATTCTCTGGTTTAGCATATTTCTACATTGTCTACATGATCAAATTTGGTGAGTTAGCTAAACTTGCCACTTCTGCGGGTGGTGCAGTTCAATCTGCTCATAACACTTTATGTTTATTTGTAATTATT ILTVPLMCVEFYLILKGAGATTKHLKHLVVASTIMLVTGYVGEAGLGDAALWGLFSGLAYFYIVYMIKFGELAKLATSAGGAVQSAHNTLCLFVII ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTTACTGTACCATTAATGTGTGTTGAATTCTATCTAATTTTAAAAGGT---------GCT------GGTGCAACAACC---AAACAT------------------------------------TTAAAGCAT---TTAGTAGTAGCTTCTACAATTATGCTTGTTACTGGATATGTTGGTGAA---------GCT------------------GGC------TTAGGA---------------------------------------------------------------------------------------------------GACGCT------------------GCTCTTTGG---GGATTATTCTCTGGTTTAGCATATTTCTACATTGTCTACATGATC---------------AAA------TTT---GGTGAGTTAGCTAAACTTGCCACTTCT------GCG---GGTGGTGCA---GTT---CAA---TCT---GCT---CAT---AAC---ACTTTA---TGTTTATTTGTAATTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKG---A--GATT-KH------------LKH-LVVASTIMLVTGYVGE---A------G--LG---------------------------------DA------ALW-GLFSGLAYFYIVYMI-----K--F-GELAKLATS--A-GGA-V-Q-S-A-H-N-TL-CLFVII-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929123 [II-CFB-MS024] PRGD_OTU077_f67db63d7e2a975f09eca1bf1b691876 gb|KJ929123| PRGD_OTU077_f67db63d7e2a975f09eca1bf1b691876, putative proteorhodopsin gene, partial cds. PRGD_OTU077_f67db63d7e2a975f09eca1bf1b691876, putative proteorhodopsin gene, partial cds. KJ929123 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025) ATCCTTACAGTTCCATTAATGTGTGTTGAATTCTATCTAATTCTTAAAGGTGCTGGTGCAACAACTAAACATCTTAAGCACTTAGTAGTAGCTTCTACAATCATGCTTGTTACTGGATTTATTGGTGAAGCTGGAACTTTTGCCGGAGGAGCGGCCTTATGGGGATTATTCTCTGGTCTTGCATATTTCTACATAGTTTACATGATCAAATTTGGAGAATTAGCTAAACTTGCTGCATCTGCAGGAGGCGCAGTTGAATCTGCTCATAAGACTTTATGTTTATTCGTTATAATC ILTVPLMCVEFYLILKGAGATTKHLKHLVVASTIMLVTGFIGEAGTFAGGAALWGLFSGLAYFYIVYMIKFGELAKLAASAGGAVESAHKTLCLFVII ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCTTACAGTTCCATTAATGTGTGTTGAATTCTATCTAATTCTTAAAGGT---------GCT------GGTGCAACAACT---AAACAT------------------------------------CTTAAGCAC---TTAGTAGTAGCTTCTACAATCATGCTTGTTACTGGATTTATTGGTGAA------------------------------GCT------GGAACT------------------------------------------------------TTT---------GCC---------------------------GGAGGAGCG------------------GCCTTATGG---GGATTATTCTCTGGTCTTGCATATTTCTACATAGTTTACATGATC---------------AAA------TTT---GGAGAATTAGCTAAACTTGCTGCATCT------GCA---GGAGGCGCA---GTT---GAA---TCT---GCT---CAT---AAG---ACTTTA---TGTTTATTCGTTATAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKG---A--GATT-KH------------LKH-LVVASTIMLVTGFIGE----------A--GT------------------F---A---------GGA------ALW-GLFSGLAYFYIVYMI-----K--F-GELAKLAAS--A-GGA-V-E-S-A-H-K-TL-CLFVII-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929115 [II-CFB-MS024] PRGD_OTU077_1171d96dd926854b29fe7a52b1ca0529 gb|KJ929115| PRGD_OTU077_1171d96dd926854b29fe7a52b1ca0529, putative proteorhodopsin gene, partial cds. PRGD_OTU077_1171d96dd926854b29fe7a52b1ca0529, putative proteorhodopsin gene, partial cds. KJ929115 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683) ATTCTTACTGTTCCTTTAATGTGTGTTGAATTTTATTTAATTCTTAAAGGAGCTGGTGCGACAACTAAACACTTAAAGCAATTAGTATTCCTTTCTACAGTAATGCTTGTTACAGGATTTGTAGGTGAAGCTGGATTAGGAAATGCTGCTATTTGGGGATTATTATCTGGTTTAGCATACTTTGTAATAGTATACATGATCAAGTTTGGAGAACTAGCTAAACTTGCTGCTTCAGCAGGAGGTGCAGTTCAATCTGCTCACAACACCTTAGTTTTATTTGTAATCATT ILTVPLMCVEFYLILKGAGATTKHLKQLVFLSTVMLVTGFVGEAGLGNAAIWGLLSGLAYFVIVYMIKFGELAKLAASAGGAVQSAHNTLVLFVII ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTACTGTTCCTTTAATGTGTGTTGAATTTTATTTAATTCTTAAAGGA---------GCT------GGTGCGACAACT---AAACAC------------------------------------TTAAAGCAA---TTAGTATTCCTTTCTACAGTAATGCTTGTTACAGGATTTGTAGGTGAA---------GCT------------------GGA------TTAGGA---------------------------------------------------------------------------------------------------AATGCT------------------GCTATTTGG---GGATTATTATCTGGTTTAGCATACTTTGTAATAGTATACATGATC---------------AAG------TTT---GGAGAACTAGCTAAACTTGCTGCTTCA------GCA---GGAGGTGCA---GTT---CAA---TCT---GCT---CAC---AAC---ACCTTA---GTTTTATTTGTAATCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKG---A--GATT-KH------------LKQ-LVFLSTVMLVTGFVGE---A------G--LG---------------------------------NA------AIW-GLLSGLAYFVIVYMI-----K--F-GELAKLAAS--A-GGA-V-Q-S-A-H-N-TL-VLFVII-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929118 [II-CFB-MS024] PRGD_OTU077_5f7e14d8e29d0e253af13c534ea096ee gb|KJ929118| PRGD_OTU077_5f7e14d8e29d0e253af13c534ea096ee, putative proteorhodopsin gene, partial cds. PRGD_OTU077_5f7e14d8e29d0e253af13c534ea096ee, putative proteorhodopsin gene, partial cds. KJ929118 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683) ATTCTTACTGTTCCTTTAATGTGTGTTGAATTTTATTTAATTCTTAAAGGAGCTGGTGCGACAACTAAGCACTTAAAGCAATTAGTATTCCTTTCTACAGTAATGCTTGTTACAGGATTTGTAGGTGAAGCTGGATTAGGAAACGCTGCTATTTGGGGATTATTATCTGGTTTAGCATACTTTGTAATAGTATACATGATCAAGTTTGGAGAACTAGCTAAACTTGCTGCTTCAGCAGGAGGTGCAGTTCAATCTGCTCACAACACCTTAGTTTTATTTGTAATCATT ILTVPLMCVEFYLILKGAGATTKHLKQLVFLSTVMLVTGFVGEAGLGNAAIWGLLSGLAYFVIVYMIKFGELAKLAASAGGAVQSAHNTLVLFVII ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTACTGTTCCTTTAATGTGTGTTGAATTTTATTTAATTCTTAAAGGA---------GCT------GGTGCGACAACT---AAGCAC------------------------------------TTAAAGCAA---TTAGTATTCCTTTCTACAGTAATGCTTGTTACAGGATTTGTAGGTGAA---------GCT------------------GGA------TTAGGA---------------------------------------------------------------------------------------------------AACGCT------------------GCTATTTGG---GGATTATTATCTGGTTTAGCATACTTTGTAATAGTATACATGATC---------------AAG------TTT---GGAGAACTAGCTAAACTTGCTGCTTCA------GCA---GGAGGTGCA---GTT---CAA---TCT---GCT---CAC---AAC---ACCTTA---GTTTTATTTGTAATCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKG---A--GATT-KH------------LKQ-LVFLSTVMLVTGFVGE---A------G--LG---------------------------------NA------AIW-GLLSGLAYFVIVYMI-----K--F-GELAKLAAS--A-GGA-V-Q-S-A-H-N-TL-VLFVII-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929114 [II-CFB-MS024] PRGD_OTU077_otuREP_d4ecbcd382760d31781771af5d5ff9a4 gb|KJ929114| PRGD_OTU077_otuREP_d4ecbcd382760d31781771af5d5ff9a4, putative proteorhodopsin gene, partial cds. PRGD_OTU077_otuREP_d4ecbcd382760d31781771af5d5ff9a4, putative proteorhodopsin gene, partial cds. KJ929114 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) ATACTTACTGTTCCATTAATGTGTGTTGAGTTCTATCTAATCCTTAAGGGTGCTGGTGCAACAACTAAACACTTAAAGCATTTGATAGTTGCTTCAACAATTATGCTTGTAACTGGTTATGTAGGTGAAGCAGGATTAGGAGATGCCGCCTTGTGGGGATTATTTTCTGGTTTAGCATACTTCTACATTGTTTACATGATAAAATTTGGCGAATTAGCTAAACTTGCAGCATCTGCTGGTGGTGCAGTTCAATCTGCTCACAACACATTATGTTTATTTGTAATTATT ILTVPLMCVEFYLILKGAGATTKHLKHLIVASTIMLVTGYVGEAGLGDAALWGLFSGLAYFYIVYMIKFGELAKLAASAGGAVQSAHNTLCLFVII ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTTACTGTTCCATTAATGTGTGTTGAGTTCTATCTAATCCTTAAGGGT---------GCT------GGTGCAACAACT---AAACAC------------------------------------TTAAAGCAT---TTGATAGTTGCTTCAACAATTATGCTTGTAACTGGTTATGTAGGTGAA---------GCA------------------GGA------TTAGGA---------------------------------------------------------------------------------------------------GATGCC------------------GCCTTGTGG---GGATTATTTTCTGGTTTAGCATACTTCTACATTGTTTACATGATA---------------AAA------TTT---GGCGAATTAGCTAAACTTGCAGCATCT------GCT---GGTGGTGCA---GTT---CAA---TCT---GCT---CAC---AAC---ACATTA---TGTTTATTTGTAATTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKG---A--GATT-KH------------LKH-LIVASTIMLVTGYVGE---A------G--LG---------------------------------DA------ALW-GLFSGLAYFYIVYMI-----K--F-GELAKLAAS--A-GGA-V-Q-S-A-H-N-TL-CLFVII-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929121 [II-CFB-MS024] PRGD_OTU077_a49d890dc09a245056bb13b688d2118a gb|KJ929121| PRGD_OTU077_a49d890dc09a245056bb13b688d2118a, putative proteorhodopsin gene, partial cds. PRGD_OTU077_a49d890dc09a245056bb13b688d2118a, putative proteorhodopsin gene, partial cds. KJ929121 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) ATCTTAACTGTTCCTTTAATGTGTGTTGAGTTTTATCTAATTCTAAAAGCTGCTGGTGCTACAACTAAGCATCTTAGAGATTTAGTTGTCCTTTCAACTATCATGTTAGTCACTGGTTATGTTGGTGAAGCTGGTTTAGGAAATGCCTCTCTTTGGGGATTATTTTCTGGTTTGGCATATTTCGCCATTGTTTACATGATCAAATTTGGAGAACTTGCTAAACTAGCTGCGTCAGCTGGTGGAGCGGTACAATCTGCTCACAATACACTTGTATTATTTGTAATTATT ILTVPLMCVEFYLILKAAGATTKHLRDLVVLSTIMLVTGYVGEAGLGNASLWGLFSGLAYFAIVYMIKFGELAKLAASAGGAVQSAHNTLVLFVII ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAACTGTTCCTTTAATGTGTGTTGAGTTTTATCTAATTCTAAAAGCT---------GCT------GGTGCTACAACT---AAGCAT------------------------------------CTTAGAGAT---TTAGTTGTCCTTTCAACTATCATGTTAGTCACTGGTTATGTTGGTGAA---------GCT------------------GGT------TTAGGA---------------------------------------------------------------------------------------------------AATGCC------------------TCTCTTTGG---GGATTATTTTCTGGTTTGGCATATTTCGCCATTGTTTACATGATC---------------AAA------TTT---GGAGAACTTGCTAAACTAGCTGCGTCA------GCT---GGTGGAGCG---GTA---CAA---TCT---GCT---CAC---AAT---ACACTT---GTATTATTTGTAATTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATT-KH------------LRD-LVVLSTIMLVTGYVGE---A------G--LG---------------------------------NA------SLW-GLFSGLAYFAIVYMI-----K--F-GELAKLAAS--A-GGA-V-Q-S-A-H-N-TL-VLFVII-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929473 [II-CFB-MS024] PRGD_OTU132_0bbf95e8c97e2a49c41932252b701603 gb|KJ929473| PRGD_OTU132_0bbf95e8c97e2a49c41932252b701603, putative proteorhodopsin gene, partial cds. PRGD_OTU132_0bbf95e8c97e2a49c41932252b701603, putative proteorhodopsin gene, partial cds. KJ929473 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Pacific side (69.5142, -133.4185), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) ATACTTACAGTACCGTTAATGTGTGTTGAGTTCTATTTAATTCTCAAAGTTGCTGGTGCTACAACAAGACACCTAAGCATTCTTATTTGGGCTTCACTCGGTATGCTTGTATTCGGTTACTTTGGTGAAACTGGATTTGCGGGTGGTTCGGCTGCATTCTGGGGCTTGCTTTCAGGAATATGTTATTTCTACATTGCTTACCTTGTCTATTTCGGTCAACTAGCGAAACTTGCTGCAGCTGCAGGAGGTTCAGTAGAAAAAGCACACAAAACATTAACACTTTTCGTACTAATT ILTVPLMCVEFYLILKVAGATTRHLSILIWASLGMLVFGYFGETGFAGGSAAFWGLLSGICYFYIAYLVYFGQLAKLAAAAGGSVEKAHKTLTLFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTTACAGTACCGTTAATGTGTGTTGAGTTCTATTTAATTCTCAAAGTT---------GCT------GGTGCTACAACA---AGACAC------------------------------------CTAAGCATT---CTTATTTGGGCTTCACTCGGTATGCTTGTATTCGGTTACTTTGGTGAA---------ACT------------------GGA------TTTGCG------------------------------------------------------GGT---------GGT------------------------------TCGGCT------------------GCATTCTGG---GGCTTGCTTTCAGGAATATGTTATTTCTACATTGCTTACCTTGTC---------------TAT------TTC---GGTCAACTAGCGAAACTTGCTGCAGCT------GCA---GGAGGTTCA---GTA---GAA---AAA---GCA---CAC---AAA---ACATTA---ACACTTTTCGTACTAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATT-RH------------LSI-LIWASLGMLVFGYFGE---T------G--FA------------------G---G----------SA------AFW-GLLSGICYFYIAYLV-----Y--F-GQLAKLAAA--A-GGS-V-E-K-A-H-K-TL-TLFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929475 [II-CFB-MS024] PRGD_OTU132_75e40148660c3e357305f07528c0a005 gb|KJ929475| PRGD_OTU132_75e40148660c3e357305f07528c0a005, putative proteorhodopsin gene, partial cds. PRGD_OTU132_75e40148660c3e357305f07528c0a005, putative proteorhodopsin gene, partial cds. KJ929475 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175) ATACTTACAGTACCGTTAATGTGTGTTGAGTTCTATTTAATTCTAAAAGTTGCTGGTGCTACAACAAGACACCTAAGCATTCTTATTTGGGCTTCACTCGGTATGCTTGTATTCGGTTACTTTGGTGAAACTGGATTTGGGGGTGGTTCGGCTGCATTCTGGGGCTTTCTTTCAGGAATATGTTATTTCTACATTGCTTACCTTGTCTATTTCGGTCAACTAGCGAAACTTGCTGCAGCTGCAGGAGGTTCAGTAGAAAAAGCACACAAAACATTAACACTTTTCGTACTAATT ILTVPLMCVEFYLILKVAGATTRHLSILIWASLGMLVFGYFGETGFGGGSAAFWGFLSGICYFYIAYLVYFGQLAKLAAAAGGSVEKAHKTLTLFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTTACAGTACCGTTAATGTGTGTTGAGTTCTATTTAATTCTAAAAGTT---------GCT------GGTGCTACAACA---AGACAC------------------------------------CTAAGCATT---CTTATTTGGGCTTCACTCGGTATGCTTGTATTCGGTTACTTTGGTGAA---------ACT------------------GGA------TTTGGG------------------------------------------------------GGT---------GGT------------------------------TCGGCT------------------GCATTCTGG---GGCTTTCTTTCAGGAATATGTTATTTCTACATTGCTTACCTTGTC---------------TAT------TTC---GGTCAACTAGCGAAACTTGCTGCAGCT------GCA---GGAGGTTCA---GTA---GAA---AAA---GCA---CAC---AAA---ACATTA---ACACTTTTCGTACTAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATT-RH------------LSI-LIWASLGMLVFGYFGE---T------G--FG------------------G---G----------SA------AFW-GFLSGICYFYIAYLV-----Y--F-GQLAKLAAA--A-GGS-V-E-K-A-H-K-TL-TLFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929472 [II-CFB-MS024] PRGD_OTU132_otuREP_fc775fb7bbf87124962cfb83f77e9aea gb|KJ929472| PRGD_OTU132_otuREP_fc775fb7bbf87124962cfb83f77e9aea, putative proteorhodopsin gene, partial cds. PRGD_OTU132_otuREP_fc775fb7bbf87124962cfb83f77e9aea, putative proteorhodopsin gene, partial cds. KJ929472 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508) ATACTTACAGTACCGTTAATGTGTGTTGAGTTCTATTTAATTCTAAAAGTTGCTGGTGCTACAACAAGACACCTAAGCATTCTTATTTGGGCTTCACTTGGTATGCTTGTATTCGGGTACTTTGGTGAAACTGGATTTGCGGGTGGTTCGGCTGCAATGTGGGGCTTCCTTTCAGGAATATGTTATTTCTACATTGCTTACCTTGTCTATTTCGGTCAACTAGCGAAACTTGCTGCAGCTGCAGGAGGTTCAGTAGAAAAAGCACACAAAACATTAACACTTTTCGTACTAATT ILTVPLMCVEFYLILKVAGATTRHLSILIWASLGMLVFGYFGETGFAGGSAAMWGFLSGICYFYIAYLVYFGQLAKLAAAAGGSVEKAHKTLTLFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTTACAGTACCGTTAATGTGTGTTGAGTTCTATTTAATTCTAAAAGTT---------GCT------GGTGCTACAACA---AGACAC------------------------------------CTAAGCATT---CTTATTTGGGCTTCACTTGGTATGCTTGTATTCGGGTACTTTGGTGAA---------ACT------------------GGA------TTTGCG------------------------------------------------------GGT---------GGT------------------------------TCGGCT------------------GCAATGTGG---GGCTTCCTTTCAGGAATATGTTATTTCTACATTGCTTACCTTGTC---------------TAT------TTC---GGTCAACTAGCGAAACTTGCTGCAGCT------GCA---GGAGGTTCA---GTA---GAA---AAA---GCA---CAC---AAA---ACATTA---ACACTTTTCGTACTAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATT-RH------------LSI-LIWASLGMLVFGYFGE---T------G--FA------------------G---G----------SA------AMW-GFLSGICYFYIAYLV-----Y--F-GQLAKLAAA--A-GGS-V-E-K-A-H-K-TL-TLFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929476 [II-CFB-MS024] PRGD_OTU132_98b8a749e7e868379c6ec3b5ca7475a9 gb|KJ929476| PRGD_OTU132_98b8a749e7e868379c6ec3b5ca7475a9, putative proteorhodopsin gene, partial cds. PRGD_OTU132_98b8a749e7e868379c6ec3b5ca7475a9, putative proteorhodopsin gene, partial cds. KJ929476 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -33.28, 45.35) ATACTTACAGTACCGTTAATGTGTGTTGAGTTCTATTTAATTCTCAAAGTTGCTGGTGCTACAACAAAACACCTAAGCGTTCTTATTTGGGCTTCACTTGGTATGCTTGTATTCGGTTACTTTGGTGAAACTGGATTTATGGGTGGTTCGGCTGCATTATGGGGCTTGCTTTCAGGAATATGTTATTTCTACATTGCTTACCTTGTCTATTTCGGTCAACTAGCGAAACTTGCTGCAGCTGCAGGAGGTTCAGTAGAAAAAGCACACAAAACATTAACACTTTTCGTACTAATC ILTVPLMCVEFYLILKVAGATTKHLSVLIWASLGMLVFGYFGETGFMGGSAALWGLLSGICYFYIAYLVYFGQLAKLAAAAGGSVEKAHKTLTLFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTTACAGTACCGTTAATGTGTGTTGAGTTCTATTTAATTCTCAAAGTT---------GCT------GGTGCTACAACA---AAACAC------------------------------------CTAAGCGTT---CTTATTTGGGCTTCACTTGGTATGCTTGTATTCGGTTACTTTGGTGAA---------ACT------------------GGA---TTTATGGGT------------------------------------------------------GGT---------TCG---------------------------GCT------------------------GCATTATGG---GGCTTGCTTTCAGGAATATGTTATTTCTACATTGCTTACCTTGTC---------------TAT------TTC---GGTCAACTAGCGAAACTTGCTGCAGCT------GCA---GGAGGTTCA---GTA---GAA---AAA---GCA---CAC---AAA---ACATTA---ACACTTTTCGTACTAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATT-KH------------LSV-LIWASLGMLVFGYFGE---T------G-FMG------------------G---S---------A--------ALW-GLLSGICYFYIAYLV-----Y--F-GQLAKLAAA--A-GGS-V-E-K-A-H-K-TL-TLFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929474 [II-CFB-MS024] PRGD_OTU132_1ec2f7ded997de852b76f59931c36f79 gb|KJ929474| PRGD_OTU132_1ec2f7ded997de852b76f59931c36f79, putative proteorhodopsin gene, partial cds. PRGD_OTU132_1ec2f7ded997de852b76f59931c36f79, putative proteorhodopsin gene, partial cds. KJ929474 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Indian Ocean (-14.48, 113.45) ATACTTACAGTACCGTTAATGTGTGTTGAGTTCTATTTAATTCTCAAAGTTGCTGGTGCTACAACAAGACACCTAAGCGTTCTTATTTGGGCTTCACTTGGTATGCTTTTATTCGGTTACTTCGGTGAAGTTTCTGACGGAAATGCATGGCTATGGGGCTTGCTTTCAGGAATATGTTATGTCTACATTGCTTACCTTGTCTATTTCGGTGAGCTAGCTAAACTTGCTGCATCTGCTGGTGGAGCGGTTGAAAAAGCACACAAAACATTAACACTTTTCGTACTAATT ILTVPLMCVEFYLILKVAGATTRHLSVLIWASLGMLLFGYFGEVSDGNAWLWGLLSGICYVYIAYLVYFGELAKLAASAGGAVEKAHKTLTLFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTTACAGTACCGTTAATGTGTGTTGAGTTCTATTTAATTCTCAAAGTT---------GCT------GGTGCTACAACA---AGACAC------------------------------------CTAAGCGTT---CTTATTTGGGCTTCACTTGGTATGCTTTTATTCGGTTACTTCGGTGAA---------GTT------------------TCT------GACGGA---------------------------------------------------------------------------------------------------AATGCA------------------TGGCTATGG---GGCTTGCTTTCAGGAATATGTTATGTCTACATTGCTTACCTTGTC---------------TAT------TTC---GGTGAGCTAGCTAAACTTGCTGCATCT------GCT---GGTGGAGCG---GTT---GAA---AAA---GCA---CAC---AAA---ACATTA---ACACTTTTCGTACTAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATT-RH------------LSV-LIWASLGMLLFGYFGE---V------S--DG---------------------------------NA------WLW-GLLSGICYVYIAYLV-----Y--F-GELAKLAAS--A-GGA-V-E-K-A-H-K-TL-TLFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929691 [II-CFB-MS024] PRGD_OTU197_1cfb0405f9b3aab42ac9950909f75e0b gb|KJ929691| PRGD_OTU197_1cfb0405f9b3aab42ac9950909f75e0b, putative proteorhodopsin gene, partial cds. PRGD_OTU197_1cfb0405f9b3aab42ac9950909f75e0b, putative proteorhodopsin gene, partial cds. KJ929691 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.935, 18.508) ATTTTGACTGTGCCATTAATGTGTGTTGAGTTTTACTTGATTCTTAAAGTAGCTGGTGCTACCAAAAAACACCTTAACATATTAATATTTGCATCACTTGTAATGCTCTTAACTGGTTATATGGGTGAAAAATCTGGTACAGACACCAATTCGCCAGCAGCATGGGGTTTTGTTTCTGGTATGGCATACTTCTATATTGTTTACTTAATCAAATTTGGTGCTTTGGCTAAACTTGCTGCATCTGCTGGTGGAGCGGTTGAAAAAGCACACAAAACTTTAACTTGGTTTGTAATTGTT ILTVPLMCVEFYLILKVAGATKKHLNILIFASLVMLLTGYMGEKSGTDTNSPAAWGFVSGMAYFYIVYLIKFGALAKLAASAGGAVEKAHKTLTWFVIV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTGACTGTGCCATTAATGTGTGTTGAGTTTTACTTGATTCTTAAAGTA---------GCT------GGTGCTACCAAA---AAACAC------------------------------------CTTAACATA---TTAATATTTGCATCACTTGTAATGCTCTTAACTGGTTATATGGGTGAA---------AAA------------------TCT------GGTACA------------------------------------------------------GAC---------ACC---------------------------AATTCGCCA------------------GCAGCATGG---GGTTTTGTTTCTGGTATGGCATACTTCTATATTGTTTACTTAATC---------------AAA------TTT---GGTGCTTTGGCTAAACTTGCTGCATCT------GCT---GGTGGAGCG---GTT---GAA---AAA---GCA---CAC---AAA---ACTTTA---ACTTGGTTTGTAATTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-KH------------LNI-LIFASLVMLLTGYMGE---K------S--GT------------------D---T---------NSP------AAW-GFVSGMAYFYIVYLI-----K--F-GALAKLAAS--A-GGA-V-E-K-A-H-K-TL-TWFVIV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929690 [II-CFB-MS024] PRGD_OTU197_otuREP_24ce0817d411f66465ee041f4beaaf25 gb|KJ929690| PRGD_OTU197_otuREP_24ce0817d411f66465ee041f4beaaf25, putative proteorhodopsin gene, partial cds. PRGD_OTU197_otuREP_24ce0817d411f66465ee041f4beaaf25, putative proteorhodopsin gene, partial cds. KJ929690 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Indian Ocean (-33.28, 45.35) ATTTTGACTGTGCCATTAATGTGTGTTGAGTTTTACTTGATTCTTAAAGTAGCTGGTGCTACCAAAAAACACCTTAACATATTAATATTTGCATCACTTGTAATGCTCTTAACTGGTTATATTGGTGAAAAATCTGGTACAGACACCAATTCGCCAGCAGCATGGGGTTTTGTTTCTGGTATAGCATACTTCTATATTGTTTACTTAATCAAATATGGTGCTTTGGCTAAACTTGCTGCATCTGCTGGTGGAGCGGTTGAAAAAGCACACAAAACTTTAACTTGGTTTGTAATTGTT ILTVPLMCVEFYLILKVAGATKKHLNILIFASLVMLLTGYIGEKSGTDTNSPAAWGFVSGIAYFYIVYLIKYGALAKLAASAGGAVEKAHKTLTWFVIV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTGACTGTGCCATTAATGTGTGTTGAGTTTTACTTGATTCTTAAAGTA---------GCT------GGTGCTACCAAA---AAACAC------------------------------------CTTAACATA---TTAATATTTGCATCACTTGTAATGCTCTTAACTGGTTATATTGGTGAA---------AAA------------------TCT------GGTACA------------------------------------------------------GAC---------ACC---------------------------AATTCGCCA------------------GCAGCATGG---GGTTTTGTTTCTGGTATAGCATACTTCTATATTGTTTACTTAATC---------------AAA------TAT---GGTGCTTTGGCTAAACTTGCTGCATCT------GCT---GGTGGAGCG---GTT---GAA---AAA---GCA---CAC---AAA---ACTTTA---ACTTGGTTTGTAATTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-KH------------LNI-LIFASLVMLLTGYIGE---K------S--GT------------------D---T---------NSP------AAW-GFVSGIAYFYIVYLI-----K--Y-GALAKLAAS--A-GGA-V-E-K-A-H-K-TL-TWFVIV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928801 [II-CFB-MS024] PRGD_OTU053_b41a62abb4a58858350b2616906f0a89 gb|KJ928801| PRGD_OTU053_b41a62abb4a58858350b2616906f0a89, putative proteorhodopsin gene, partial cds. PRGD_OTU053_b41a62abb4a58858350b2616906f0a89, putative proteorhodopsin gene, partial cds. KJ928801 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), English Channel (48.7717, -3.9683) ATACTTACAGTACCATTGATGTGTGTTGAGTTCTATTTAATACTAAAGGCAGCTGGTGCAACAACCAAACACCTTCAGACATTAATTTTAGCTTCGCTTGTTATGCTTGTTACAGGTTACTTCGGTGAAGTTTCTGACGGAAATGCATGGCTATGGGGTCTTGCTTCTGGTGCCGCATACTTCTACATCGCATACTTAATCAAGTACGGTGAGCTAGCTAAACTTGCTGCATCTGCTGGTGGAGCGGTTGAAAAAGCACACAAGACATTAACACTATTTGTATTAATC ILTVPLMCVEFYLILKAAGATTKHLQTLILASLVMLVTGYFGEVSDGNAWLWGLASGAAYFYIAYLIKYGELAKLAASAGGAVEKAHKTLTLFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTTACAGTACCATTGATGTGTGTTGAGTTCTATTTAATACTAAAGGCA---------GCT------GGTGCAACAACC---AAACAC------------------------------------CTTCAGACA---TTAATTTTAGCTTCGCTTGTTATGCTTGTTACAGGTTACTTCGGTGAA---------GTT------------------TCT------GACGGA---------------------------------------------------------------------------------------------------AATGCA------------------TGGCTATGG---GGTCTTGCTTCTGGTGCCGCATACTTCTACATCGCATACTTAATC---------------AAG------TAC---GGTGAGCTAGCTAAACTTGCTGCATCT------GCT---GGTGGAGCG---GTT---GAA---AAA---GCA---CAC---AAG---ACATTA---ACACTATTTGTATTAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATT-KH------------LQT-LILASLVMLVTGYFGE---V------S--DG---------------------------------NA------WLW-GLASGAAYFYIAYLI-----K--Y-GELAKLAAS--A-GGA-V-E-K-A-H-K-TL-TLFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928804 [II-CFB-MS024] PRGD_OTU053_f4541aef1768d5c2a539faf7019477f4 gb|KJ928804| PRGD_OTU053_f4541aef1768d5c2a539faf7019477f4, putative proteorhodopsin gene, partial cds. PRGD_OTU053_f4541aef1768d5c2a539faf7019477f4, putative proteorhodopsin gene, partial cds. KJ928804 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATACTTACAGTACCGTTGATGTGTGTTGAGTTCTATTTAATCCTTAAGGCTGCTGGTGCAACAACCAAACACCTTAAGACACTAATCTGGGCTTCACTTGTTATGCTTATAACTGGTTACTTCGGTGAAGTTTCTGACGGAAATGCATGGCTATGGGGTGTTGCTTCTGGTGCCGCATACTTTTACATCGCATACCTAATCAAGTACGGTGAGCTAGCTAAACTTGCTGCATCTGCCGGTGGAGCGGTTGAAAAAGCACACAAAACATTAACACTTTTCGTATTGATT ILTVPLMCVEFYLILKAAGATTKHLKTLIWASLVMLITGYFGEVSDGNAWLWGVASGAAYFYIAYLIKYGELAKLAASAGGAVEKAHKTLTLFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTTACAGTACCGTTGATGTGTGTTGAGTTCTATTTAATCCTTAAGGCT---------GCT------GGTGCAACAACC---AAACAC------------------------------------CTTAAGACA---CTAATCTGGGCTTCACTTGTTATGCTTATAACTGGTTACTTCGGTGAA---------GTT------------------TCT------GACGGA---------------------------------------------------------------------------------------------------AATGCA------------------TGGCTATGG---GGTGTTGCTTCTGGTGCCGCATACTTTTACATCGCATACCTAATC---------------AAG------TAC---GGTGAGCTAGCTAAACTTGCTGCATCT------GCC---GGTGGAGCG---GTT---GAA---AAA---GCA---CAC---AAA---ACATTA---ACACTTTTCGTATTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATT-KH------------LKT-LIWASLVMLITGYFGE---V------S--DG---------------------------------NA------WLW-GVASGAAYFYIAYLI-----K--Y-GELAKLAAS--A-GGA-V-E-K-A-H-K-TL-TLFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928796 [II-CFB-MS024] PRGD_OTU053_5168a040ba015e9833f0f9aa27988486 gb|KJ928796| PRGD_OTU053_5168a040ba015e9833f0f9aa27988486, putative proteorhodopsin gene, partial cds. PRGD_OTU053_5168a040ba015e9833f0f9aa27988486, putative proteorhodopsin gene, partial cds. KJ928796 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATACTTACAGTACCGTTAATGTGTGTTGAGTTCTATTTAATACTCAAGGCTGCTGGTGCAACAACCAAACACCTTAAGACATTAATTTTAGCTTCACTTGTTATGCTTGTTACAGGTTACTTCGGTGAAGTTTCTGACGGAAATGCATGGGCATGGGGCCTTGCTTCTGGTATAGCATACTTTTACATCGCATACTTAATCAAGTACGGTGAGCTAGCTAAACTTGCTGCATCTGCTGGTGGAGCGGTTGAAAAAGCACACAAAACATTAACTCTTTTCGTGTTGATC ILTVPLMCVEFYLILKAAGATTKHLKTLILASLVMLVTGYFGEVSDGNAWAWGLASGIAYFYIAYLIKYGELAKLAASAGGAVEKAHKTLTLFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTTACAGTACCGTTAATGTGTGTTGAGTTCTATTTAATACTCAAGGCT---------GCT------GGTGCAACAACC---AAACAC------------------------------------CTTAAGACA---TTAATTTTAGCTTCACTTGTTATGCTTGTTACAGGTTACTTCGGTGAA---------GTT------------------TCT------GACGGA---------------------------------------------------------------------------------------------------AATGCA------------------TGGGCATGG---GGCCTTGCTTCTGGTATAGCATACTTTTACATCGCATACTTAATC---------------AAG------TAC---GGTGAGCTAGCTAAACTTGCTGCATCT------GCT---GGTGGAGCG---GTT---GAA---AAA---GCA---CAC---AAA---ACATTA---ACTCTTTTCGTGTTGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATT-KH------------LKT-LILASLVMLVTGYFGE---V------S--DG---------------------------------NA------WAW-GLASGIAYFYIAYLI-----K--Y-GELAKLAAS--A-GGA-V-E-K-A-H-K-TL-TLFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928792 [II-CFB-MS024] PRGD_OTU053_16b3380d6bf67807ce99168408842019 gb|KJ928792| PRGD_OTU053_16b3380d6bf67807ce99168408842019, putative proteorhodopsin gene, partial cds. PRGD_OTU053_16b3380d6bf67807ce99168408842019, putative proteorhodopsin gene, partial cds. KJ928792 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.935 18.508 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) ATACTTACAGTTCCATTGATGTGTGTTGAGTTCTATTTAATTCTAAAGGCTGCTGGTGCAACAACCAAACACCTTAAGACGTTAATCTGGGCTTCACTTGTTATGCTTGTTACAGGTTACTTTGGAGAAGTTTCTGACGGAAATGCATGGTCATGGGGTCTTGCTTCTGGTATAGCATACTTCTACATCGCATACTTAATCACGTTTGGTGAGCTAGCTAAACTTGCTGCATCTGCTGGTGGAGCGGTTGAAAAAGCACACAAAACATTAACTCTTTTTGTACTTATC ILTVPLMCVEFYLILKAAGATTKHLKTLIWASLVMLVTGYFGEVSDGNAWSWGLASGIAYFYIAYLITFGELAKLAASAGGAVEKAHKTLTLFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTTACAGTTCCATTGATGTGTGTTGAGTTCTATTTAATTCTAAAGGCT---------GCT------GGTGCAACAACC---AAACAC------------------------------------CTTAAGACG---TTAATCTGGGCTTCACTTGTTATGCTTGTTACAGGTTACTTTGGAGAA---------GTT------------------TCT------GACGGA---------------------------------------------------------------------------------------------------AATGCA------------------TGGTCATGG---GGTCTTGCTTCTGGTATAGCATACTTCTACATCGCATACTTAATC---------------ACG------TTT---GGTGAGCTAGCTAAACTTGCTGCATCT------GCT---GGTGGAGCG---GTT---GAA---AAA---GCA---CAC---AAA---ACATTA---ACTCTTTTTGTACTTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATT-KH------------LKT-LIWASLVMLVTGYFGE---V------S--DG---------------------------------NA------WSW-GLASGIAYFYIAYLI-----T--F-GELAKLAAS--A-GGA-V-E-K-A-H-K-TL-TLFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928793 [II-CFB-MS024] PRGD_OTU053_19b40740ee3bd8268fa88d2f9d003966 gb|KJ928793| PRGD_OTU053_19b40740ee3bd8268fa88d2f9d003966, putative proteorhodopsin gene, partial cds. PRGD_OTU053_19b40740ee3bd8268fa88d2f9d003966, putative proteorhodopsin gene, partial cds. KJ928793 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.935 18.508 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) ATACTAACAGTTCCATTGATGTGTGTTGAGTTCTATTTAATTCTAAAGGCTGCTGGTGCAACAACCAAACACCTTAAGACGTTAATCTGGGCTTCACTTGTGATGCTTGTCACAGGTTACTTCGGTGAAGTTGCTGACGGCGGTACTGCAATGCCTGCACTTTGGGGTTTTGCTTCTGGTTTAGCTTATCTCTACATTGCATACCTAATCAAGTATGGTGAGCTAGCTAAGCTTGCTGCATCTGCGGGTGGAGCGGTTGAAAAAGCACACAAAACATTAACTCTTTTTGTACTTATC ILTVPLMCVEFYLILKAAGATTKHLKTLIWASLVMLVTGYFGEVADGGTAMPALWGFASGLAYLYIAYLIKYGELAKLAASAGGAVEKAHKTLTLFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTAACAGTTCCATTGATGTGTGTTGAGTTCTATTTAATTCTAAAGGCT---------GCT------GGTGCAACAACC---AAACAC------------------------------------CTTAAGACG---TTAATCTGGGCTTCACTTGTGATGCTTGTCACAGGTTACTTCGGTGAA---------GTT------------------GCT------GACGGC------------------------------------------------------GGT---------ACT---------------------------GCAATGCCT------------------GCACTTTGG---GGTTTTGCTTCTGGTTTAGCTTATCTCTACATTGCATACCTAATC---------------AAG------TAT---GGTGAGCTAGCTAAGCTTGCTGCATCT------GCG---GGTGGAGCG---GTT---GAA---AAA---GCA---CAC---AAA---ACATTA---ACTCTTTTTGTACTTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATT-KH------------LKT-LIWASLVMLVTGYFGE---V------A--DG------------------G---T---------AMP------ALW-GFASGLAYLYIAYLI-----K--Y-GELAKLAAS--A-GGA-V-E-K-A-H-K-TL-TLFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928789 [II-CFB-MS024] PRGD_OTU053_otuREP_c7dc843fdbd474064fc34599e24bfc6e gb|KJ928789| PRGD_OTU053_otuREP_c7dc843fdbd474064fc34599e24bfc6e, putative proteorhodopsin gene, partial cds. PRGD_OTU053_otuREP_c7dc843fdbd474064fc34599e24bfc6e, putative proteorhodopsin gene, partial cds. KJ928789 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.935 18.508 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) ATACTAACAGTTCCATTGATGTGTGTTGAGTTCTATTTAATTCTAAAGGCTGCTGGTGCAACAACCAAACACCTTAAGACGTTAATCTGGGCTTCACTTGTGATGCTTGTCACAGGTTACTTCGGTGAAGTTGCTGACGGCGGTACTGCAATGCCTGCACTTTGGGGTCTTGCTTCTGGTGTAGCTTATTTCTACATTGCATACCTAATCAAGTATGGTGAGCTAGCTAAGCTTGCTGCATCTGCGGGTGGAGCGGTTGAAAAAGCACACAAAACATTAACTCTTTTTGTACTTATC ILTVPLMCVEFYLILKAAGATTKHLKTLIWASLVMLVTGYFGEVADGGTAMPALWGLASGVAYFYIAYLIKYGELAKLAASAGGAVEKAHKTLTLFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTAACAGTTCCATTGATGTGTGTTGAGTTCTATTTAATTCTAAAGGCT---------GCT------GGTGCAACAACC---AAACAC------------------------------------CTTAAGACG---TTAATCTGGGCTTCACTTGTGATGCTTGTCACAGGTTACTTCGGTGAA---------GTT------------------GCT------GACGGC------------------------------------------------------GGT---------ACT---------------------------GCAATGCCT------------------GCACTTTGG---GGTCTTGCTTCTGGTGTAGCTTATTTCTACATTGCATACCTAATC---------------AAG------TAT---GGTGAGCTAGCTAAGCTTGCTGCATCT------GCG---GGTGGAGCG---GTT---GAA---AAA---GCA---CAC---AAA---ACATTA---ACTCTTTTTGTACTTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATT-KH------------LKT-LIWASLVMLVTGYFGE---V------A--DG------------------G---T---------AMP------ALW-GLASGVAYFYIAYLI-----K--Y-GELAKLAAS--A-GGA-V-E-K-A-H-K-TL-TLFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928794 [II-CFB-MS024] PRGD_OTU053_1cda7023ebf93af3bc04db593771c8d2 gb|KJ928794| PRGD_OTU053_1cda7023ebf93af3bc04db593771c8d2, putative proteorhodopsin gene, partial cds. PRGD_OTU053_1cda7023ebf93af3bc04db593771c8d2, putative proteorhodopsin gene, partial cds. KJ928794 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) ATACTAACAGTTCCACTGATGTGTGTTGAGTTCTATTTAATCCTTAAGGCTGCTGGTGCAACAACTAAACACCTTAAGACATTAATTTTGGCTTCACTTGTGATGCTTGTTACAGGTTACTTCGGTGAAGTTGCTGACGGCGGCACTGCAATGCCTGCACTTTGGGGTCTTGCTTCTGGTGTAGCTTATTTCTACATTGCATACCTAATCAAATATGGTGAGCTAGCTAAGCTTGCTGCATCTGCGGGTGGAGCGGTTGAAAAAGCACACAAAACATTAACACTTTTTGTACTTATC ILTVPLMCVEFYLILKAAGATTKHLKTLILASLVMLVTGYFGEVADGGTAMPALWGLASGVAYFYIAYLIKYGELAKLAASAGGAVEKAHKTLTLFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTAACAGTTCCACTGATGTGTGTTGAGTTCTATTTAATCCTTAAGGCT---------GCT------GGTGCAACAACT---AAACAC------------------------------------CTTAAGACA---TTAATTTTGGCTTCACTTGTGATGCTTGTTACAGGTTACTTCGGTGAA---------GTT------------------GCT------GACGGC------------------------------------------------------GGC---------ACT---------------------------GCAATGCCT------------------GCACTTTGG---GGTCTTGCTTCTGGTGTAGCTTATTTCTACATTGCATACCTAATC---------------AAA------TAT---GGTGAGCTAGCTAAGCTTGCTGCATCT------GCG---GGTGGAGCG---GTT---GAA---AAA---GCA---CAC---AAA---ACATTA---ACACTTTTTGTACTTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATT-KH------------LKT-LILASLVMLVTGYFGE---V------A--DG------------------G---T---------AMP------ALW-GLASGVAYFYIAYLI-----K--Y-GELAKLAAS--A-GGA-V-E-K-A-H-K-TL-TLFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928799 [II-CFB-MS024] PRGD_OTU053_624492e0241ac8c162707d08a1dc71a3 gb|KJ928799| PRGD_OTU053_624492e0241ac8c162707d08a1dc71a3, putative proteorhodopsin gene, partial cds. PRGD_OTU053_624492e0241ac8c162707d08a1dc71a3, putative proteorhodopsin gene, partial cds. KJ928799 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATACTAACAGTTCCATTGATGTGTGTTGAGTTCTTTTTAATCCTTAAGGCTGCTGGTGCAACAACCAAACACCTTCAGACATTAATCTGGGCCTCACTTGTGATGCTTGTTACAGGTTACTTCGGTGAAGTTGCTGACGGCGGTACAAATATGCCTGCACTTTGGGGTCTTGCTTCAGGTCTAGCTTATTTTTACATTGCATATCTAATCAAATTTGGTGAGCTAGCTAAGCTTGCTGCATCTGCGGGTGGAGCGGTTGAAAAAGCACACAAAACATTAACACTTTTTGTACTTATC ILTVPLMCVEFFLILKAAGATTKHLQTLIWASLVMLVTGYFGEVADGGTNMPALWGLASGLAYFYIAYLIKFGELAKLAASAGGAVEKAHKTLTLFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTAACAGTTCCATTGATGTGTGTTGAGTTCTTTTTAATCCTTAAGGCT---------GCT------GGTGCAACAACC---AAACAC------------------------------------CTTCAGACA---TTAATCTGGGCCTCACTTGTGATGCTTGTTACAGGTTACTTCGGTGAA---------GTT------------------GCT------GACGGC------------------------------------------------------GGT---------ACA---------------------------AATATGCCT------------------GCACTTTGG---GGTCTTGCTTCAGGTCTAGCTTATTTTTACATTGCATATCTAATC---------------AAA------TTT---GGTGAGCTAGCTAAGCTTGCTGCATCT------GCG---GGTGGAGCG---GTT---GAA---AAA---GCA---CAC---AAA---ACATTA---ACACTTTTTGTACTTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFFLILKA---A--GATT-KH------------LQT-LIWASLVMLVTGYFGE---V------A--DG------------------G---T---------NMP------ALW-GLASGLAYFYIAYLI-----K--F-GELAKLAAS--A-GGA-V-E-K-A-H-K-TL-TLFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928802 [II-CFB-MS024] PRGD_OTU053_beeafa751f02cdce17f136f2f004224a gb|KJ928802| PRGD_OTU053_beeafa751f02cdce17f136f2f004224a, putative proteorhodopsin gene, partial cds. PRGD_OTU053_beeafa751f02cdce17f136f2f004224a, putative proteorhodopsin gene, partial cds. KJ928802 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATACTAACAGTTCCATTGATGTGTGTTGAGTTCTATTTAATACTTAAGGCTGCTGGTGCAACAACCAAACACCTTAAGACATTAATCTGGGCTTCACTTGTGATGCTTGTTACAGGTTACTTCGGTGAAGTTGCTGACGGCGGTACTGCAATGCCTGCACTTTGGGGTCTTGCTTCAGGTCTAGCTTATTTTTACATTGCATATCTAATCAAATTTGGTGAGCTAGCTAAGCTTGCTGCATCTGCGGGTGGAGCGGTTGAAAAAGCACACAAAACATTAACACTTTTTGTACTTATC ILTVPLMCVEFYLILKAAGATTKHLKTLIWASLVMLVTGYFGEVADGGTAMPALWGLASGLAYFYIAYLIKFGELAKLAASAGGAVEKAHKTLTLFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTAACAGTTCCATTGATGTGTGTTGAGTTCTATTTAATACTTAAGGCT---------GCT------GGTGCAACAACC---AAACAC------------------------------------CTTAAGACA---TTAATCTGGGCTTCACTTGTGATGCTTGTTACAGGTTACTTCGGTGAA---------GTT------------------GCT------GACGGC------------------------------------------------------GGT---------ACT---------------------------GCAATGCCT------------------GCACTTTGG---GGTCTTGCTTCAGGTCTAGCTTATTTTTACATTGCATATCTAATC---------------AAA------TTT---GGTGAGCTAGCTAAGCTTGCTGCATCT------GCG---GGTGGAGCG---GTT---GAA---AAA---GCA---CAC---AAA---ACATTA---ACACTTTTTGTACTTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATT-KH------------LKT-LIWASLVMLVTGYFGE---V------A--DG------------------G---T---------AMP------ALW-GLASGLAYFYIAYLI-----K--F-GELAKLAAS--A-GGA-V-E-K-A-H-K-TL-TLFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928790 [II-CFB-MS024] PRGD_OTU053_083a3e891a17156cda3347dd8263dbcd gb|KJ928790| PRGD_OTU053_083a3e891a17156cda3347dd8263dbcd, putative proteorhodopsin gene, partial cds. PRGD_OTU053_083a3e891a17156cda3347dd8263dbcd, putative proteorhodopsin gene, partial cds. KJ928790 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508) ATACTTACAGTACCATTGATGTGTGTTGAGTTCTATTTAATCCTTAAGGCTGCTGGTGCAACAACCAAACACCTTAAGACATTAATCTGGGCTTCACTTGTTATGCTTGTAACTGGTTACTTCGGTGAAGTTGCTGATAGCGGCACTGCAATGCCTGCACTATGGGGTCTTGCTTCTGGTATCGCATACTTCTACATCGCATACTTAATCAAGTACGGTGAGCTAGCTAAACTTGCTGCATCTGCTGGTGGAGCGGTTGAAAAAGCACACAAAACATTAACACTTTTCGTATTGATC ILTVPLMCVEFYLILKAAGATTKHLKTLIWASLVMLVTGYFGEVADSGTAMPALWGLASGIAYFYIAYLIKYGELAKLAASAGGAVEKAHKTLTLFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTTACAGTACCATTGATGTGTGTTGAGTTCTATTTAATCCTTAAGGCT---------GCT------GGTGCAACAACC---AAACAC------------------------------------CTTAAGACA---TTAATCTGGGCTTCACTTGTTATGCTTGTAACTGGTTACTTCGGTGAA---------GTT------------------GCT------GATAGC------------------------------------------------------GGC---------ACT---------------------------GCAATGCCT------------------GCACTATGG---GGTCTTGCTTCTGGTATCGCATACTTCTACATCGCATACTTAATC---------------AAG------TAC---GGTGAGCTAGCTAAACTTGCTGCATCT------GCT---GGTGGAGCG---GTT---GAA---AAA---GCA---CAC---AAA---ACATTA---ACACTTTTCGTATTGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATT-KH------------LKT-LIWASLVMLVTGYFGE---V------A--DS------------------G---T---------AMP------ALW-GLASGIAYFYIAYLI-----K--Y-GELAKLAAS--A-GGA-V-E-K-A-H-K-TL-TLFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928798 [II-CFB-MS024] PRGD_OTU053_61275c2f264af9f62636a31b312d177e gb|KJ928798| PRGD_OTU053_61275c2f264af9f62636a31b312d177e, putative proteorhodopsin gene, partial cds. PRGD_OTU053_61275c2f264af9f62636a31b312d177e, putative proteorhodopsin gene, partial cds. KJ928798 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) ATACTTACAGTACCGTTGATGTGTGTTGAGTTCTATTTAATCCTTAAGGCTGCTGGTGCAACAACCAAACACCTTAAGACATTAATCTGGGCTTCACTTGTTATGCTTGTAACTGGTTACTTCGGTGAAGTTGCTGATAGCAGCACTGCAATGCCTGCACTTTGGGGTCTTGCTTCTGGTATCGCATACTTCTACATCGCATACTTAATCAAGTACGGTGAGCTAGCTAAACTTGCTGCATCTGCTGGTGGAGCGGTTGAAAAAGCACACAAAACATTAACACTTTTCGTATTGATC ILTVPLMCVEFYLILKAAGATTKHLKTLIWASLVMLVTGYFGEVADSSTAMPALWGLASGIAYFYIAYLIKYGELAKLAASAGGAVEKAHKTLTLFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTTACAGTACCGTTGATGTGTGTTGAGTTCTATTTAATCCTTAAGGCT---------GCT------GGTGCAACAACC---AAACAC------------------------------------CTTAAGACA---TTAATCTGGGCTTCACTTGTTATGCTTGTAACTGGTTACTTCGGTGAA---------GTT------------------GCT------GATAGC------------------------------------------------------AGC---------ACT---------------------------GCAATGCCT------------------GCACTTTGG---GGTCTTGCTTCTGGTATCGCATACTTCTACATCGCATACTTAATC---------------AAG------TAC---GGTGAGCTAGCTAAACTTGCTGCATCT------GCT---GGTGGAGCG---GTT---GAA---AAA---GCA---CAC---AAA---ACATTA---ACACTTTTCGTATTGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATT-KH------------LKT-LIWASLVMLVTGYFGE---V------A--DS------------------S---T---------AMP------ALW-GLASGIAYFYIAYLI-----K--Y-GELAKLAAS--A-GGA-V-E-K-A-H-K-TL-TLFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928791 [II-CFB-MS024] PRGD_OTU053_13f31805b492460dcc2b78d0de0e1cd9 gb|KJ928791| PRGD_OTU053_13f31805b492460dcc2b78d0de0e1cd9, putative proteorhodopsin gene, partial cds. PRGD_OTU053_13f31805b492460dcc2b78d0de0e1cd9, putative proteorhodopsin gene, partial cds. KJ928791 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) ATACTTACAGTACCGTTAATGTGTGTTGAGTTCTATTTAATTCTTAAGGCTGCTGGTGCAACAACCAAACACCTCAAGACTTTAATCTGGGCTTCACTTGTTATGCTAGTTACAGGGTACTTTGGTGAAGTTGCTGACAGTAGCACTGCTATGCCTGCATTATGGGGTCTTGCTTCTGGTATTGCTTACTTCTACATAGCATACCTAATCAAGTATGGTGAGCTAGCTCAGCTTGCAGCATCTGCTGGTGGAGCGGTTGAAAAAGCACACAAGACATTAACACTATTTGTATTAATC ILTVPLMCVEFYLILKAAGATTKHLKTLIWASLVMLVTGYFGEVADSSTAMPALWGLASGIAYFYIAYLIKYGELAQLAASAGGAVEKAHKTLTLFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTTACAGTACCGTTAATGTGTGTTGAGTTCTATTTAATTCTTAAGGCT---------GCT------GGTGCAACAACC---AAACAC------------------------------------CTCAAGACT---TTAATCTGGGCTTCACTTGTTATGCTAGTTACAGGGTACTTTGGTGAA---------GTT------------------GCT------GACAGT------------------------------------------------------AGC---------ACT---------------------------GCTATGCCT------------------GCATTATGG---GGTCTTGCTTCTGGTATTGCTTACTTCTACATAGCATACCTAATC---------------AAG------TAT---GGTGAGCTAGCTCAGCTTGCAGCATCT------GCT---GGTGGAGCG---GTT---GAA---AAA---GCA---CAC---AAG---ACATTA---ACACTATTTGTATTAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATT-KH------------LKT-LIWASLVMLVTGYFGE---V------A--DS------------------S---T---------AMP------ALW-GLASGIAYFYIAYLI-----K--Y-GELAQLAAS--A-GGA-V-E-K-A-H-K-TL-TLFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928805 [II-CFB-MS024] PRGD_OTU053_f9394541f005186e8cb9f606830c08cf gb|KJ928805| PRGD_OTU053_f9394541f005186e8cb9f606830c08cf, putative proteorhodopsin gene, partial cds. PRGD_OTU053_f9394541f005186e8cb9f606830c08cf, putative proteorhodopsin gene, partial cds. KJ928805 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683) ATACTTACGGTACCGTTAATGTGTGTTGAGTTCTATTTAATTCTTAAGGCTGCTGGCGCAACAACCAAGCACCTCAAGACTTTAATCTGGGCTTCACTTGTTATGCTCGTAACAGGGTACTTTGGTGAAGTTGCTGACAGTAGCACTGCTATGCCTGCATTATGGGGTCTTGCTTCTGGTATTGCTTATTTCTACATCGCATACCTAATCAAGTATGGTGAGCTAGCTAAGCTTGCAGCATCTGCTGGTGGAGCGGTTGAAAAAGCACACAAGACATTAACACTATTTGTATTAATC ILTVPLMCVEFYLILKAAGATTKHLKTLIWASLVMLVTGYFGEVADSSTAMPALWGLASGIAYFYIAYLIKYGELAKLAASAGGAVEKAHKTLTLFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTTACGGTACCGTTAATGTGTGTTGAGTTCTATTTAATTCTTAAGGCT---------GCT------GGCGCAACAACC---AAGCAC------------------------------------CTCAAGACT---TTAATCTGGGCTTCACTTGTTATGCTCGTAACAGGGTACTTTGGTGAA---------GTT------------------GCT------GACAGT------------------------------------------------------AGC---------ACT---------------------------GCTATGCCT------------------GCATTATGG---GGTCTTGCTTCTGGTATTGCTTATTTCTACATCGCATACCTAATC---------------AAG------TAT---GGTGAGCTAGCTAAGCTTGCAGCATCT------GCT---GGTGGAGCG---GTT---GAA---AAA---GCA---CAC---AAG---ACATTA---ACACTATTTGTATTAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATT-KH------------LKT-LIWASLVMLVTGYFGE---V------A--DS------------------S---T---------AMP------ALW-GLASGIAYFYIAYLI-----K--Y-GELAKLAAS--A-GGA-V-E-K-A-H-K-TL-TLFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928800 [II-CFB-MS024] PRGD_OTU053_92b374c4de6758864bbc165a603eb833 gb|KJ928800| PRGD_OTU053_92b374c4de6758864bbc165a603eb833, putative proteorhodopsin gene, partial cds. PRGD_OTU053_92b374c4de6758864bbc165a603eb833, putative proteorhodopsin gene, partial cds. KJ928800 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) ATACTTACGGTACCATTAATGTGTGTTGAGTTCTATTTAATTCTTAAGGCTGCTGGTGCAACAACCAAACACCTCAAGACTTTAATCTGGGCTTCACTTGTCATGCTCGTAACAGGGTACTTTGGTGAAGTTGCTGACAGTAGCACTGCTATGCCTGCATTGTGGGGTCTTGCTTCTGGTATTGCTTATTTCTACATAGCATACCTAATTAAGTATGGCGAGCTAGCTCAGCTTGCAGCATCTGCTGGTGGAGCGGTTGAAAAAGCACACAAGACATTAACACTATTTGTATTGATC ILTVPLMCVEFYLILKAAGATTKHLKTLIWASLVMLVTGYFGEVADSSTAMPALWGLASGIAYFYIAYLIKYGELAQLAASAGGAVEKAHKTLTLFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTTACGGTACCATTAATGTGTGTTGAGTTCTATTTAATTCTTAAGGCT---------GCT------GGTGCAACAACC---AAACAC------------------------------------CTCAAGACT---TTAATCTGGGCTTCACTTGTCATGCTCGTAACAGGGTACTTTGGTGAA---------GTT------------------GCT------GACAGT------------------------------------------------------AGC---------ACT---------------------------GCTATGCCT------------------GCATTGTGG---GGTCTTGCTTCTGGTATTGCTTATTTCTACATAGCATACCTAATT---------------AAG------TAT---GGCGAGCTAGCTCAGCTTGCAGCATCT------GCT---GGTGGAGCG---GTT---GAA---AAA---GCA---CAC---AAG---ACATTA---ACACTATTTGTATTGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATT-KH------------LKT-LIWASLVMLVTGYFGE---V------A--DS------------------S---T---------AMP------ALW-GLASGIAYFYIAYLI-----K--Y-GELAQLAAS--A-GGA-V-E-K-A-H-K-TL-TLFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928803 [II-CFB-MS024] PRGD_OTU053_e479b92cc438f67dfb8328949e7572c2 gb|KJ928803| PRGD_OTU053_e479b92cc438f67dfb8328949e7572c2, putative proteorhodopsin gene, partial cds. PRGD_OTU053_e479b92cc438f67dfb8328949e7572c2, putative proteorhodopsin gene, partial cds. KJ928803 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) ATACTTACGGTACCATTAATGTGTGTTGAGTTCTATTTAATTCTTAAGGCTGCTGGTGCAACAACTAAACACCTTAAGACTTTAATCTGGGCTTCACTTGTTATGCTCGTAACAGGGTACTTTGGTGAAGTTGCTGACAGTAGCACTGCAATGCCTGCATTATGGGGTCTTGCTTCTGGTATTGCTTATTTCTACATCGCATACCTAATCAAGTATGGTGAGCTAGCTCAGCTTGCAGCATCTGCTGGTGGAGCGGTTGAAAAAGCACACAAGACATTAACACTATTTGTATTAATC ILTVPLMCVEFYLILKAAGATTKHLKTLIWASLVMLVTGYFGEVADSSTAMPALWGLASGIAYFYIAYLIKYGELAQLAASAGGAVEKAHKTLTLFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTTACGGTACCATTAATGTGTGTTGAGTTCTATTTAATTCTTAAGGCT---------GCT------GGTGCAACAACT---AAACAC------------------------------------CTTAAGACT---TTAATCTGGGCTTCACTTGTTATGCTCGTAACAGGGTACTTTGGTGAA---------GTT------------------GCT------GACAGT------------------------------------------------------AGC---------ACT---------------------------GCAATGCCT------------------GCATTATGG---GGTCTTGCTTCTGGTATTGCTTATTTCTACATCGCATACCTAATC---------------AAG------TAT---GGTGAGCTAGCTCAGCTTGCAGCATCT------GCT---GGTGGAGCG---GTT---GAA---AAA---GCA---CAC---AAG---ACATTA---ACACTATTTGTATTAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATT-KH------------LKT-LIWASLVMLVTGYFGE---V------A--DS------------------S---T---------AMP------ALW-GLASGIAYFYIAYLI-----K--Y-GELAQLAAS--A-GGA-V-E-K-A-H-K-TL-TLFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928795 [II-CFB-MS024] PRGD_OTU053_2e8ff48cf27c219562453acb48ca2f60 gb|KJ928795| PRGD_OTU053_2e8ff48cf27c219562453acb48ca2f60, putative proteorhodopsin gene, partial cds. PRGD_OTU053_2e8ff48cf27c219562453acb48ca2f60, putative proteorhodopsin gene, partial cds. KJ928795 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 01-juil-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Mediterranean Sea (33.935, 18.508) ATTTTAACAGTACCGTTAATGTGTGTTGAGTTTTTCCTAATCTTAAAAGCTGCTGGTGCAACAACAAAGCACTTAACAACTTTAATTTGGGCATCACTTGTAATGCTTGTAACTGGTTACTTTGGTGAAGTTGCTGATGGAAGTTCTGCTGCTCCTGCTCTATGGGGTCTTGCTTCTGGTTTGGCGTACTTCTATATAGTATACCTTATCAAGTTTGGTGACTTAGCAAAACTAGCTGCTTCTGCAGGTGGGGCTGTTGAAAAAGCACACAAAACCCTTACATTATTTGTACTTATC ILTVPLMCVEFFLILKAAGATTKHLTTLIWASLVMLVTGYFGEVADGSSAAPALWGLASGLAYFYIVYLIKFGDLAKLAASAGGAVEKAHKTLTLFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACAGTACCGTTAATGTGTGTTGAGTTTTTCCTAATCTTAAAAGCT---------GCT------GGTGCAACAACA---AAGCAC------------------------------------TTAACAACT---TTAATTTGGGCATCACTTGTAATGCTTGTAACTGGTTACTTTGGTGAA---------GTT------------------GCT------GATGGA------------------------------------------------------AGT---------TCT---------------------------GCTGCTCCT------------------GCTCTATGG---GGTCTTGCTTCTGGTTTGGCGTACTTCTATATAGTATACCTTATC---------------AAG------TTT---GGTGACTTAGCAAAACTAGCTGCTTCT------GCA---GGTGGGGCT---GTT---GAA---AAA---GCA---CAC---AAA---ACCCTT---ACATTATTTGTACTTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFFLILKA---A--GATT-KH------------LTT-LIWASLVMLVTGYFGE---V------A--DG------------------S---S---------AAP------ALW-GLASGLAYFYIVYLI-----K--F-GDLAKLAAS--A-GGA-V-E-K-A-H-K-TL-TLFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928797 [II-CFB-MS024] PRGD_OTU053_5619af735b134c07a2d0900228991b63 gb|KJ928797| PRGD_OTU053_5619af735b134c07a2d0900228991b63, putative proteorhodopsin gene, partial cds. PRGD_OTU053_5619af735b134c07a2d0900228991b63, putative proteorhodopsin gene, partial cds. KJ928797 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTTTAACAGTACCGTTAATGTGTGTTGAGTTTTTCCTAATCTTAAAAGCTGCTGGTGCAACAACAAAGCACTTAACAACTTTAATTTGGGCATCACTTGTAATGCTTGTAACTGGTTACTTTGGTGAAGTTGCTGATGGAAGTTCTGCTGCTCCTGCTCTATGGGGTCTTGCTTCTGGTTTGGCGTACTTCTATATTGTATACCTTATCAAGTTTGGTGACTTAGCAAAACTAGCTGCTTCTGCAGGTGGGGCTGTTGAAAAAGCACACAAAACACTTACATTGTTTGTACTTATT ILTVPLMCVEFFLILKAAGATTKHLTTLIWASLVMLVTGYFGEVADGSSAAPALWGLASGLAYFYIVYLIKFGDLAKLAASAGGAVEKAHKTLTLFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACAGTACCGTTAATGTGTGTTGAGTTTTTCCTAATCTTAAAAGCT---------GCT------GGTGCAACAACA---AAGCAC------------------------------------TTAACAACT---TTAATTTGGGCATCACTTGTAATGCTTGTAACTGGTTACTTTGGTGAA---------GTT------------------GCT------GATGGA------------------------------------------------------AGT---------TCT---------------------------GCTGCTCCT------------------GCTCTATGG---GGTCTTGCTTCTGGTTTGGCGTACTTCTATATTGTATACCTTATC---------------AAG------TTT---GGTGACTTAGCAAAACTAGCTGCTTCT------GCA---GGTGGGGCT---GTT---GAA---AAA---GCA---CAC---AAA---ACACTT---ACATTGTTTGTACTTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFFLILKA---A--GATT-KH------------LTT-LIWASLVMLVTGYFGE---V------A--DG------------------S---S---------AAP------ALW-GLASGLAYFYIVYLI-----K--F-GDLAKLAAS--A-GGA-V-E-K-A-H-K-TL-TLFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928540 [II-CFB-MS024] PRGD_OTU040_b89ad9c52ee13dc7142a09bdf85d1dab gb|KJ928540| PRGD_OTU040_b89ad9c52ee13dc7142a09bdf85d1dab, putative proteorhodopsin gene, partial cds. PRGD_OTU040_b89ad9c52ee13dc7142a09bdf85d1dab, putative proteorhodopsin gene, partial cds. KJ928540 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45) GTGTTGACAGTACCATTAATGTGTGTAGAGTTTTACCTTATTCTTAAGGCGGCTGGAGCCACTAAATCATTGATGTGGAAACTAATTTTCCTATCTGTAATCATGTTAGTAACAGGTTACTTTGGAGAAGCAGTTCACACTACCGGTAACGGTCCTGCATTATGGGGTCTTATCTCTGGTTTGGCTTATTTCGCTATAGTTTATGAAATCTGGAAAGGTGGAGCTGCCAAGTTGGCTGAAGCTGCTGGTGGAGCCGTTCTTTCTGCTCACAAAACACTTTTGAAGTTTGTTTTCATC VLTVPLMCVEFYLILKAAGATKSLMWKLIFLSVIMLVTGYFGEAVHTTGNGPALWGLISGLAYFAIVYEIWKGGAAKLAEAAGGAVLSAHKTLLKFVFI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTTGACAGTACCATTAATGTGTGTAGAGTTTTACCTTATTCTTAAGGCG---------GCT------GGAGCCACTAAA---TCATTG------------------------------------ATGTGGAAA---CTAATTTTCCTATCTGTAATCATGTTAGTAACAGGTTACTTTGGAGAA---------GCA------------------GTT------CACACT------------------------------------------------------ACC---------GGT---------------------------AACGGTCCT------------------GCATTATGG---GGTCTTATCTCTGGTTTGGCTTATTTCGCTATAGTTTATGAAATC---------------TGG------AAA---GGTGGAGCTGCCAAGTTGGCTGAAGCT------GCT---GGTGGAGCC---GTT---CTT---TCT---GCT---CAC---AAA---ACACTT---TTGAAGTTTGTTTTCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKA---A--GATK-SL------------MWK-LIFLSVIMLVTGYFGE---A------V--HT------------------T---G---------NGP------ALW-GLISGLAYFAIVYEI-----W--K-GGAAKLAEA--A-GGA-V-L-S-A-H-K-TL-LKFVFI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928542 [II-CFB-MS024] PRGD_OTU040_da241dd857afbf583a2a966e8f7ffca6 gb|KJ928542| PRGD_OTU040_da241dd857afbf583a2a966e8f7ffca6, putative proteorhodopsin gene, partial cds. PRGD_OTU040_da241dd857afbf583a2a966e8f7ffca6, putative proteorhodopsin gene, partial cds. KJ928542 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) GTGTTGACAGTACCATTAATGTGTGTAGAGTTTTACCTTATTCTTAAGGCGGCTGGAGCCACTAAATCATTGATGTGGAAACTAATTTTCCTATCTGTAATCATGTTAGTAACAGGTTACTTTGGAGAAGCAGTTCACACTACCGGTAACGGTCCTGCGTTATGGGGTCTTATCTCTGGTTTGGCTTATTTCGCTATCGTTTATGAAATCTGGAAAGGTGGAGCTGCCAAGTTGGCTGAAGCTGCTGGAGGAGCCGTTCTTTCTGCTCACAAAACACTTTTGAAGTTTGTATTCATC VLTVPLMCVEFYLILKAAGATKSLMWKLIFLSVIMLVTGYFGEAVHTTGNGPALWGLISGLAYFAIVYEIWKGGAAKLAEAAGGAVLSAHKTLLKFVFI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTTGACAGTACCATTAATGTGTGTAGAGTTTTACCTTATTCTTAAGGCG---------GCT------GGAGCCACTAAA---TCATTG------------------------------------ATGTGGAAA---CTAATTTTCCTATCTGTAATCATGTTAGTAACAGGTTACTTTGGAGAA---------GCA------------------GTT------CACACT------------------------------------------------------ACC---------GGT---------------------------AACGGTCCT------------------GCGTTATGG---GGTCTTATCTCTGGTTTGGCTTATTTCGCTATCGTTTATGAAATC---------------TGG------AAA---GGTGGAGCTGCCAAGTTGGCTGAAGCT------GCT---GGAGGAGCC---GTT---CTT---TCT---GCT---CAC---AAA---ACACTT---TTGAAGTTTGTATTCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKA---A--GATK-SL------------MWK-LIFLSVIMLVTGYFGE---A------V--HT------------------T---G---------NGP------ALW-GLISGLAYFAIVYEI-----W--K-GGAAKLAEA--A-GGA-V-L-S-A-H-K-TL-LKFVFI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928528 [II-CFB-MS024] PRGD_OTU040_0fde9d2a54827e3155af81687fa2971e gb|KJ928528| PRGD_OTU040_0fde9d2a54827e3155af81687fa2971e, putative proteorhodopsin gene, partial cds. PRGD_OTU040_0fde9d2a54827e3155af81687fa2971e, putative proteorhodopsin gene, partial cds. KJ928528 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na GTGTTGACAGTACCTTTAATGTGTGTAGAGTTTTACCTTATTCTTAAGGCGGCTGGAGCTACTAAATCATTGATGTGGAAACTAATTTTCCTATCTGTAATCATGTTAGTAACAGGTTACTTTGGAGAATCAGTTCACACTACCGGTAACGGTCCTGCATTATGGGGTCTTATCTCTGGTTTGGCTTATTTCGCTATCGTTTATGAAATCTGGAAAGGTGGAGCTGCCAAGTTGGCTGAAGCTGCTGGTGGAGCCGTTCTTTCTGCTCACAAAACACTTTTGAAGTTTGTATTCATC VLTVPLMCVEFYLILKAAGATKSLMWKLIFLSVIMLVTGYFGESVHTTGNGPALWGLISGLAYFAIVYEIWKGGAAKLAEAAGGAVLSAHKTLLKFVFI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTTGACAGTACCTTTAATGTGTGTAGAGTTTTACCTTATTCTTAAGGCG---------GCT------GGAGCTACTAAA---TCATTG------------------------------------ATGTGGAAA---CTAATTTTCCTATCTGTAATCATGTTAGTAACAGGTTACTTTGGAGAA---------TCA------------------GTT------CACACT------------------------------------------------------ACC---------GGT---------------------------AACGGTCCT------------------GCATTATGG---GGTCTTATCTCTGGTTTGGCTTATTTCGCTATCGTTTATGAAATC---------------TGG------AAA---GGTGGAGCTGCCAAGTTGGCTGAAGCT------GCT---GGTGGAGCC---GTT---CTT---TCT---GCT---CAC---AAA---ACACTT---TTGAAGTTTGTATTCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKA---A--GATK-SL------------MWK-LIFLSVIMLVTGYFGE---S------V--HT------------------T---G---------NGP------ALW-GLISGLAYFAIVYEI-----W--K-GGAAKLAEA--A-GGA-V-L-S-A-H-K-TL-LKFVFI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928547 [II-CFB-MS024] PRGD_OTU040_fdd827b61a114b6c5db91b2a9aaafe2d gb|KJ928547| PRGD_OTU040_fdd827b61a114b6c5db91b2a9aaafe2d, putative proteorhodopsin gene, partial cds. PRGD_OTU040_fdd827b61a114b6c5db91b2a9aaafe2d, putative proteorhodopsin gene, partial cds. KJ928547 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (69.5142, -133.4185) GTGTTGACAGTACCATTAATGTGTGTAGAGTTTTACCTTATTCTTAAGGCGGCTGGAGCCACTAAATCATTGATGTGGAAACTAATTTTCCTATCTGTAATCATGTTAGTAACAGGTTACTTTGGAGAAGCAGTTCACACTACCGGCAACGGTCCTGCATTGTGGGGTCTTATCTCTGGTTTGGCTTATTTCGCTATCGTTTTTGAAATATGGAAAGGTGGAGCTGCCAAGTTGGCTGAATCTGCTGGTGGAGCCGTTCTTTCTGCTCACAAAACTCTTTTGAAGTTTGTATTCATC VLTVPLMCVEFYLILKAAGATKSLMWKLIFLSVIMLVTGYFGEAVHTTGNGPALWGLISGLAYFAIVFEIWKGGAAKLAESAGGAVLSAHKTLLKFVFI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTTGACAGTACCATTAATGTGTGTAGAGTTTTACCTTATTCTTAAGGCG---------GCT------GGAGCCACTAAA---TCATTG------------------------------------ATGTGGAAA---CTAATTTTCCTATCTGTAATCATGTTAGTAACAGGTTACTTTGGAGAA---------GCA------------------GTT------CACACT------------------------------------------------------ACC---------GGC---------------------------AACGGTCCT------------------GCATTGTGG---GGTCTTATCTCTGGTTTGGCTTATTTCGCTATCGTTTTTGAAATA---------------TGG------AAA---GGTGGAGCTGCCAAGTTGGCTGAATCT------GCT---GGTGGAGCC---GTT---CTT---TCT---GCT---CAC---AAA---ACTCTT---TTGAAGTTTGTATTCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKA---A--GATK-SL------------MWK-LIFLSVIMLVTGYFGE---A------V--HT------------------T---G---------NGP------ALW-GLISGLAYFAIVFEI-----W--K-GGAAKLAES--A-GGA-V-L-S-A-H-K-TL-LKFVFI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928535 [II-CFB-MS024] PRGD_OTU040_8890ca0597e9884222588453836ce371 gb|KJ928535| PRGD_OTU040_8890ca0597e9884222588453836ce371, putative proteorhodopsin gene, partial cds. PRGD_OTU040_8890ca0597e9884222588453836ce371, putative proteorhodopsin gene, partial cds. KJ928535 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683) GTGTTGACAGTACCATTAATGTGTGTAGAGTTTTACCTTATTCTTAAGGCGGCTGGAGCCACTAAATCATTGATGTGGAAACTAATTTTCCTATCTGTAATCATGTTAGTAACAGGTTACTTTGGAGAAGCAGTTCACACTACCGGTAACGGTCCTGCATTGTGGGGTCTTATCTCTGGTTTGGCTTATTTTGCTATCGTTTATGAAATCTGGAAAGGTGGAGCTGCCAAGTTAGCTGAAGCTGCTGGTGGAGCTGTTCTTTCTGCTCACAAAACACTTTTGAAGTTTGTATTCATC VLTVPLMCVEFYLILKAAGATKSLMWKLIFLSVIMLVTGYFGEAVHTTGNGPALWGLISGLAYFAIVYEIWKGGAAKLAEAAGGAVLSAHKTLLKFVFI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTTGACAGTACCATTAATGTGTGTAGAGTTTTACCTTATTCTTAAGGCG---------GCT------GGAGCCACTAAA---TCATTG------------------------------------ATGTGGAAA---CTAATTTTCCTATCTGTAATCATGTTAGTAACAGGTTACTTTGGAGAA---------GCA------------------GTT------CACACT------------------------------------------------------ACC---------GGT---------------------------AACGGTCCT------------------GCATTGTGG---GGTCTTATCTCTGGTTTGGCTTATTTTGCTATCGTTTATGAAATC---------------TGG------AAA---GGTGGAGCTGCCAAGTTAGCTGAAGCT------GCT---GGTGGAGCT---GTT---CTT---TCT---GCT---CAC---AAA---ACACTT---TTGAAGTTTGTATTCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKA---A--GATK-SL------------MWK-LIFLSVIMLVTGYFGE---A------V--HT------------------T---G---------NGP------ALW-GLISGLAYFAIVYEI-----W--K-GGAAKLAEA--A-GGA-V-L-S-A-H-K-TL-LKFVFI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928537 [II-CFB-MS024] PRGD_OTU040_9c9917a937f212bee1810fdc01a35edd gb|KJ928537| PRGD_OTU040_9c9917a937f212bee1810fdc01a35edd, putative proteorhodopsin gene, partial cds. PRGD_OTU040_9c9917a937f212bee1810fdc01a35edd, putative proteorhodopsin gene, partial cds. KJ928537 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) GTGTTGACAGTACCGTTAATGTGTGTTGAGTTTTACCTTATTCTTAAGGCGGCTGGAGCCACTAAATCATTAATGTGGAAACTTATATTCCTATCTGTAATCATGTTAGTAACTGGTTACTTTGGAGAAGCCGTTCACAATACTGGTAACGGCCCTGCATTGTGGGGTCTTATTTCTGGTTTGGCTTATTTCGCAATTGTTTATGAAATCTGGAAAGGTGGAGCTGCCAAGCTTGCAGAAGCTGCTGGTGGAGCCGTTCTTTCTGCTCACAAAACACTTTTGAAATTTGTTGTTATT VLTVPLMCVEFYLILKAAGATKSLMWKLIFLSVIMLVTGYFGEAVHNTGNGPALWGLISGLAYFAIVYEIWKGGAAKLAEAAGGAVLSAHKTLLKFVVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTTGACAGTACCGTTAATGTGTGTTGAGTTTTACCTTATTCTTAAGGCG---------GCT------GGAGCCACTAAA---TCATTA------------------------------------ATGTGGAAA---CTTATATTCCTATCTGTAATCATGTTAGTAACTGGTTACTTTGGAGAA---------GCC------------------GTT------CACAAT------------------------------------------------------ACT---------GGT---------------------------AACGGCCCT------------------GCATTGTGG---GGTCTTATTTCTGGTTTGGCTTATTTCGCAATTGTTTATGAAATC---------------TGG------AAA---GGTGGAGCTGCCAAGCTTGCAGAAGCT------GCT---GGTGGAGCC---GTT---CTT---TCT---GCT---CAC---AAA---ACACTT---TTGAAATTTGTTGTTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKA---A--GATK-SL------------MWK-LIFLSVIMLVTGYFGE---A------V--HN------------------T---G---------NGP------ALW-GLISGLAYFAIVYEI-----W--K-GGAAKLAEA--A-GGA-V-L-S-A-H-K-TL-LKFVVI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928531 [II-CFB-MS024] PRGD_OTU040_3dd4f868ac05d6ece39e95ed5724362b gb|KJ928531| PRGD_OTU040_3dd4f868ac05d6ece39e95ed5724362b, putative proteorhodopsin gene, partial cds. PRGD_OTU040_3dd4f868ac05d6ece39e95ed5724362b, putative proteorhodopsin gene, partial cds. KJ928531 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683) GTGTTAACTGTACCGTTAATGTGTGTTGAATTTTATCTTATTTTAAAGGCGGCTGGTGCCACCAAATCATTGATGTGGAAACTTATTTTCCTATCTGTAATCATGTTAGTAACAGGTTATTTTGGAGAAGCAGTTCACACAACAGGTAATGGACCTGCTCTATGGGGGCTTATTTCTGGTTTGGCTTACTTTGCCATCGTTTTTGAAATCTGGAAAGGTGGAGCTGCAAAACTGGCTGAATCTGCTGGTGGAGCCGTTCTTTCTGCCCACAAAACACTTCTAAAGTTTGTATTCATT VLTVPLMCVEFYLILKAAGATKSLMWKLIFLSVIMLVTGYFGEAVHTTGNGPALWGLISGLAYFAIVFEIWKGGAAKLAESAGGAVLSAHKTLLKFVFI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTTAACTGTACCGTTAATGTGTGTTGAATTTTATCTTATTTTAAAGGCG---------GCT------GGTGCCACCAAA---TCATTG------------------------------------ATGTGGAAA---CTTATTTTCCTATCTGTAATCATGTTAGTAACAGGTTATTTTGGAGAA---------GCA------------------GTT------CACACA------------------------------------------------------ACA---------GGT---------------------------AATGGACCT------------------GCTCTATGG---GGGCTTATTTCTGGTTTGGCTTACTTTGCCATCGTTTTTGAAATC---------------TGG------AAA---GGTGGAGCTGCAAAACTGGCTGAATCT------GCT---GGTGGAGCC---GTT---CTT---TCT---GCC---CAC---AAA---ACACTT---CTAAAGTTTGTATTCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKA---A--GATK-SL------------MWK-LIFLSVIMLVTGYFGE---A------V--HT------------------T---G---------NGP------ALW-GLISGLAYFAIVFEI-----W--K-GGAAKLAES--A-GGA-V-L-S-A-H-K-TL-LKFVFI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928539 [II-CFB-MS024] PRGD_OTU040_af0c12e4a8ea9be3f056cef7fc8b4bcf gb|KJ928539| PRGD_OTU040_af0c12e4a8ea9be3f056cef7fc8b4bcf, putative proteorhodopsin gene, partial cds. PRGD_OTU040_af0c12e4a8ea9be3f056cef7fc8b4bcf, putative proteorhodopsin gene, partial cds. KJ928539 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) GTGTTAACTGTACCGTTAATGTGTGTTGAATTTTATCTTATTTTAAAGGCGGCTGGTGCCACCAAATCATTGATGTGGAAACTTATTTTCCTATCTGTAATCATGTTAGTAACAGGTTATTTTGGAGAAGCAGTTCACACAACAGGTAATGGACCTGCTCTATGGGGGCTTATTTCTGGTTTGGCTTACTTTGCTATCGTTTTTGAAATCTGGAAAGGTGGAGCTGCAAAACTGGCTGAATCTGCTGGTGGAGCCGTTCTTTCTGCCCACAAAACACTACTAAAGTTTGTATTCATT VLTVPLMCVEFYLILKAAGATKSLMWKLIFLSVIMLVTGYFGEAVHTTGNGPALWGLISGLAYFAIVFEIWKGGAAKLAESAGGAVLSAHKTLLKFVFI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTTAACTGTACCGTTAATGTGTGTTGAATTTTATCTTATTTTAAAGGCG---------GCT------GGTGCCACCAAA---TCATTG------------------------------------ATGTGGAAA---CTTATTTTCCTATCTGTAATCATGTTAGTAACAGGTTATTTTGGAGAA---------GCA------------------GTT------CACACA------------------------------------------------------ACA---------GGT---------------------------AATGGACCT------------------GCTCTATGG---GGGCTTATTTCTGGTTTGGCTTACTTTGCTATCGTTTTTGAAATC---------------TGG------AAA---GGTGGAGCTGCAAAACTGGCTGAATCT------GCT---GGTGGAGCC---GTT---CTT---TCT---GCC---CAC---AAA---ACACTA---CTAAAGTTTGTATTCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKA---A--GATK-SL------------MWK-LIFLSVIMLVTGYFGE---A------V--HT------------------T---G---------NGP------ALW-GLISGLAYFAIVFEI-----W--K-GGAAKLAES--A-GGA-V-L-S-A-H-K-TL-LKFVFI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928526 [II-CFB-MS024] PRGD_OTU040_00d8f7d7b174669f63526f4a3b90d774 gb|KJ928526| PRGD_OTU040_00d8f7d7b174669f63526f4a3b90d774, putative proteorhodopsin gene, partial cds. PRGD_OTU040_00d8f7d7b174669f63526f4a3b90d774, putative proteorhodopsin gene, partial cds. KJ928526 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) GTGTTAACTGTACCGTTAATGTGTGTTGAATTTTATCTTATCTTAAAGGCGGCTGGTGCCACCAAATCATTGATGTGGAAACTTATTTTCCTATCTGTAATCATGTTGGTAACAGGTTATTTTGGAGAAGCAGTTCACACAACAGGTAATGGACCTGCTCTATGGGGGCTTATTTCTGGTTTGGCTTACTTTGCCATCGTTTTTGAAATCTGGAAAGGTGGAGCTGCAAAACTGGCTGAATCTGCTGGTGGAGCCGTTCTTTCTGCCCACAAAACACTTCTAAAGTTTGTATTCATT VLTVPLMCVEFYLILKAAGATKSLMWKLIFLSVIMLVTGYFGEAVHTTGNGPALWGLISGLAYFAIVFEIWKGGAAKLAESAGGAVLSAHKTLLKFVFI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTTAACTGTACCGTTAATGTGTGTTGAATTTTATCTTATCTTAAAGGCG---------GCT------GGTGCCACCAAA---TCATTG------------------------------------ATGTGGAAA---CTTATTTTCCTATCTGTAATCATGTTGGTAACAGGTTATTTTGGAGAA---------GCA------------------GTT------CACACA------------------------------------------------------ACA---------GGT---------------------------AATGGACCT------------------GCTCTATGG---GGGCTTATTTCTGGTTTGGCTTACTTTGCCATCGTTTTTGAAATC---------------TGG------AAA---GGTGGAGCTGCAAAACTGGCTGAATCT------GCT---GGTGGAGCC---GTT---CTT---TCT---GCC---CAC---AAA---ACACTT---CTAAAGTTTGTATTCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKA---A--GATK-SL------------MWK-LIFLSVIMLVTGYFGE---A------V--HT------------------T---G---------NGP------ALW-GLISGLAYFAIVFEI-----W--K-GGAAKLAES--A-GGA-V-L-S-A-H-K-TL-LKFVFI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928524 [II-CFB-MS024] PRGD_OTU040_otuREP_4fb3402e61068124218a92b295e501f3 gb|KJ928524| PRGD_OTU040_otuREP_4fb3402e61068124218a92b295e501f3, putative proteorhodopsin gene, partial cds. PRGD_OTU040_otuREP_4fb3402e61068124218a92b295e501f3, putative proteorhodopsin gene, partial cds. KJ928524 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) GTGTTGACCGTGCCATTAATGTGTGTTGAATTTTATCTTATCCTTAGAGCGGCTGGAGCCACCAAATCATTGATGTGGAAGCTTATCTTCCTTTCAGTAGTAATGCTGGTAACAGGTTACTTTGGTGAAGCGGTTCACACAACGGGTCAAGGTCCTGCATTGTGGGGTCTTATCTCTGGTCTTGCTTACTTTGCAATTGTGTTTGAAATCTGGAAGGGTGGAGCTGCTAAGCTTGCGGAAGCTGCTGGTGGTGCCGTTCTTTCTGCGCACAAAACACTTTTAAAGTTCGTATTTATC VLTVPLMCVEFYLILRAAGATKSLMWKLIFLSVVMLVTGYFGEAVHTTGQGPALWGLISGLAYFAIVFEIWKGGAAKLAEAAGGAVLSAHKTLLKFVFI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTTGACCGTGCCATTAATGTGTGTTGAATTTTATCTTATCCTTAGAGCG---------GCT------GGAGCCACCAAA---TCATTG------------------------------------ATGTGGAAG---CTTATCTTCCTTTCAGTAGTAATGCTGGTAACAGGTTACTTTGGTGAA---------GCG------------------GTT------CACACA------------------------------------------------------ACG---------GGT---------------------------CAAGGTCCT------------------GCATTGTGG---GGTCTTATCTCTGGTCTTGCTTACTTTGCAATTGTGTTTGAAATC---------------TGG------AAG---GGTGGAGCTGCTAAGCTTGCGGAAGCT------GCT---GGTGGTGCC---GTT---CTT---TCT---GCG---CAC---AAA---ACACTT---TTAAAGTTCGTATTTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILRA---A--GATK-SL------------MWK-LIFLSVVMLVTGYFGE---A------V--HT------------------T---G---------QGP------ALW-GLISGLAYFAIVFEI-----W--K-GGAAKLAEA--A-GGA-V-L-S-A-H-K-TL-LKFVFI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928541 [II-CFB-MS024] PRGD_OTU040_cdea0a8fdb88723730f8944b6ea2622d gb|KJ928541| PRGD_OTU040_cdea0a8fdb88723730f8944b6ea2622d, putative proteorhodopsin gene, partial cds. PRGD_OTU040_cdea0a8fdb88723730f8944b6ea2622d, putative proteorhodopsin gene, partial cds. KJ928541 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175) GTGTTGACCGTGCCATTAATGTGTGTTGAATTTTATCTTATCCTCAGAGCGGCTGGAGCCACCAAATCATTGATGTGGAAGCTTATCTTCCTTTCAGTAGTAATGCTGGTAACAGGTTACTTTGGTGAAGCGGTTCACACAACGGGTCAAGGTCCTGCATTGTGGGGTCTTATCTCTGGTCTTGCTTACTTTGCAATTGTGTTTGAAATCTGGAAAGGTGGAGCTGCTAAGCTTGCGGAAGCTGCTGGTGGTGCCGTTCTTTCTGCGCACAAAACACTTTTAAAGTTCGTATTTATC VLTVPLMCVEFYLILRAAGATKSLMWKLIFLSVVMLVTGYFGEAVHTTGQGPALWGLISGLAYFAIVFEIWKGGAAKLAEAAGGAVLSAHKTLLKFVFI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTTGACCGTGCCATTAATGTGTGTTGAATTTTATCTTATCCTCAGAGCG---------GCT------GGAGCCACCAAA---TCATTG------------------------------------ATGTGGAAG---CTTATCTTCCTTTCAGTAGTAATGCTGGTAACAGGTTACTTTGGTGAA---------GCG------------------GTT------CACACA------------------------------------------------------ACG---------GGT---------------------------CAAGGTCCT------------------GCATTGTGG---GGTCTTATCTCTGGTCTTGCTTACTTTGCAATTGTGTTTGAAATC---------------TGG------AAA---GGTGGAGCTGCTAAGCTTGCGGAAGCT------GCT---GGTGGTGCC---GTT---CTT---TCT---GCG---CAC---AAA---ACACTT---TTAAAGTTCGTATTTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILRA---A--GATK-SL------------MWK-LIFLSVVMLVTGYFGE---A------V--HT------------------T---G---------QGP------ALW-GLISGLAYFAIVFEI-----W--K-GGAAKLAEA--A-GGA-V-L-S-A-H-K-TL-LKFVFI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928544 [II-CFB-MS024] PRGD_OTU040_ef7f89b999241ba5d56f08a0fb6aa186 gb|KJ928544| PRGD_OTU040_ef7f89b999241ba5d56f08a0fb6aa186, putative proteorhodopsin gene, partial cds. PRGD_OTU040_ef7f89b999241ba5d56f08a0fb6aa186, putative proteorhodopsin gene, partial cds. KJ928544 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45; -33.28, 45.35) GTGTTGACCGTGCCATTAATGTGTGTTGAATTTTATCTTATCCTCAGAGCGGCTGGAGCCACTAAATCATTGATGTGGAAGCTTATCTTCCTTTCAGTAGTAATGCTGGTAACAGGTTACTTTGGTGAAGCGGTTCACACAACGGGTCAAGGTCCTGCATTGTGGGGTCTTATTTCTGGTCTTGCTTACTTTGCAATTGTGTTTGAAATCTGGAAAGGTGGAGCTGCTAAGCTTGCGGAAGCTGCTGGTGGTGCCGTTCTTTCTGCGCACAAAACACTTTTAAAGTTCGTATTTATC VLTVPLMCVEFYLILRAAGATKSLMWKLIFLSVVMLVTGYFGEAVHTTGQGPALWGLISGLAYFAIVFEIWKGGAAKLAEAAGGAVLSAHKTLLKFVFI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTTGACCGTGCCATTAATGTGTGTTGAATTTTATCTTATCCTCAGAGCG---------GCT------GGAGCCACTAAA---TCATTG------------------------------------ATGTGGAAG---CTTATCTTCCTTTCAGTAGTAATGCTGGTAACAGGTTACTTTGGTGAA---------GCG------------------GTT------CACACA------------------------------------------------------ACG---------GGT---------------------------CAAGGTCCT------------------GCATTGTGG---GGTCTTATTTCTGGTCTTGCTTACTTTGCAATTGTGTTTGAAATC---------------TGG------AAA---GGTGGAGCTGCTAAGCTTGCGGAAGCT------GCT---GGTGGTGCC---GTT---CTT---TCT---GCG---CAC---AAA---ACACTT---TTAAAGTTCGTATTTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILRA---A--GATK-SL------------MWK-LIFLSVVMLVTGYFGE---A------V--HT------------------T---G---------QGP------ALW-GLISGLAYFAIVFEI-----W--K-GGAAKLAEA--A-GGA-V-L-S-A-H-K-TL-LKFVFI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928530 [II-CFB-MS024] PRGD_OTU040_1fe4bc047b3affe781affd1ae57907cf gb|KJ928530| PRGD_OTU040_1fe4bc047b3affe781affd1ae57907cf, putative proteorhodopsin gene, partial cds. PRGD_OTU040_1fe4bc047b3affe781affd1ae57907cf, putative proteorhodopsin gene, partial cds. KJ928530 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45) GTGTTGACCGTGCCATTAATGTGTGTTGAATTTTATCTTATCCTCAGAGCGGCTGGAGCCACTAAATCATTGATGTGGAAGCTTATCTTCCTTTCAGTAGTAATGCTGGTAACAGGTTACTTTGGCGAAGCGGTTCACACAACGGGTCAAGGTCCTGCATTGTGGGGTCTTATTTCTGGTCTTGCTTACTTTGCAATCGTGTTTGAAATCTGGAAAGGTGGAGCTGCCAAGCTTGCGGAAGCTGCTGGTGGTGCCGTTCTTTCTGCGCACAAAACACTTTTAAAGTTCGTATTTATC VLTVPLMCVEFYLILRAAGATKSLMWKLIFLSVVMLVTGYFGEAVHTTGQGPALWGLISGLAYFAIVFEIWKGGAAKLAEAAGGAVLSAHKTLLKFVFI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTTGACCGTGCCATTAATGTGTGTTGAATTTTATCTTATCCTCAGAGCG---------GCT------GGAGCCACTAAA---TCATTG------------------------------------ATGTGGAAG---CTTATCTTCCTTTCAGTAGTAATGCTGGTAACAGGTTACTTTGGCGAA---------GCG------------------GTT------CACACA------------------------------------------------------ACG---------GGT---------------------------CAAGGTCCT------------------GCATTGTGG---GGTCTTATTTCTGGTCTTGCTTACTTTGCAATCGTGTTTGAAATC---------------TGG------AAA---GGTGGAGCTGCCAAGCTTGCGGAAGCT------GCT---GGTGGTGCC---GTT---CTT---TCT---GCG---CAC---AAA---ACACTT---TTAAAGTTCGTATTTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILRA---A--GATK-SL------------MWK-LIFLSVVMLVTGYFGE---A------V--HT------------------T---G---------QGP------ALW-GLISGLAYFAIVFEI-----W--K-GGAAKLAEA--A-GGA-V-L-S-A-H-K-TL-LKFVFI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928527 [II-CFB-MS024] PRGD_OTU040_09fd3f155e3621dd4b7521e48af64ee7 gb|KJ928527| PRGD_OTU040_09fd3f155e3621dd4b7521e48af64ee7, putative proteorhodopsin gene, partial cds. PRGD_OTU040_09fd3f155e3621dd4b7521e48af64ee7, putative proteorhodopsin gene, partial cds. KJ928527 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) GTGTTAACTGTTCCATTAATGTGTGTAGAATTTTATCTGATTTTGAAAGCGGCTGGAGCCACAAAGTCACTAATGTGGAAACTTATTTTCCTCTCTGTAATCATGTTAGTAACAGGTTACTTTGGAGAAGCAGTTCACACTACCGGAAATGGTCCTGCATTGTGGGGTCTTATATCTGGTCTGGCTTATTTCACGATTGTTTACGAAATCTGGAAAGGTGGAGCTGCCAAATTAGCTGAAGCTGCTGGTGGAGCTGTGCTCTCTGCTCACAAAACACTTCTGAAATTTGTATTTATC VLTVPLMCVEFYLILKAAGATKSLMWKLIFLSVIMLVTGYFGEAVHTTGNGPALWGLISGLAYFTIVYEIWKGGAAKLAEAAGGAVLSAHKTLLKFVFI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTTAACTGTTCCATTAATGTGTGTAGAATTTTATCTGATTTTGAAAGCG---------GCT------GGAGCCACAAAG---TCACTA------------------------------------ATGTGGAAA---CTTATTTTCCTCTCTGTAATCATGTTAGTAACAGGTTACTTTGGAGAA---------GCA------------------GTT------CACACT------------------------------------------------------ACC---------GGA---------------------------AATGGTCCT------------------GCATTGTGG---GGTCTTATATCTGGTCTGGCTTATTTCACGATTGTTTACGAAATC---------------TGG------AAA---GGTGGAGCTGCCAAATTAGCTGAAGCT------GCT---GGTGGAGCT---GTG---CTC---TCT---GCT---CAC---AAA---ACACTT---CTGAAATTTGTATTTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKA---A--GATK-SL------------MWK-LIFLSVIMLVTGYFGE---A------V--HT------------------T---G---------NGP------ALW-GLISGLAYFTIVYEI-----W--K-GGAAKLAEA--A-GGA-V-L-S-A-H-K-TL-LKFVFI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928536 [II-CFB-MS024] PRGD_OTU040_9bf02bdbd184cccd2e0a28e1bb0c3e3d gb|KJ928536| PRGD_OTU040_9bf02bdbd184cccd2e0a28e1bb0c3e3d, putative proteorhodopsin gene, partial cds. PRGD_OTU040_9bf02bdbd184cccd2e0a28e1bb0c3e3d, putative proteorhodopsin gene, partial cds. KJ928536 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175) GTGTTAACTGTACCATTAATGTGTGTAGAATTTTATCTAATTTTGAAAGCGGCTGGAGCCACAAAGTCACTAATGTGGAAACTTATTTTCCTTTCTGTAATCATGTTAGTAACAGGTTACTTTGGAGAAGCAGTTCACACTACCGGTAATGGTCCTGCATTGTGGGGTCTTATCTCTGGATTGGCTTATTTCACGATTGTTTTTGAGATCTGGAAAGGTGGAGCTGCCAAATTAGCTGAAGCTGCTGGTGGAGCTGTGCTTTCTGCTCACAAAACACTTCTAAAATTTGTATTCATT VLTVPLMCVEFYLILKAAGATKSLMWKLIFLSVIMLVTGYFGEAVHTTGNGPALWGLISGLAYFTIVFEIWKGGAAKLAEAAGGAVLSAHKTLLKFVFI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTTAACTGTACCATTAATGTGTGTAGAATTTTATCTAATTTTGAAAGCG---------GCT------GGAGCCACAAAG---TCACTA------------------------------------ATGTGGAAA---CTTATTTTCCTTTCTGTAATCATGTTAGTAACAGGTTACTTTGGAGAA---------GCA------------------GTT------CACACT------------------------------------------------------ACC---------GGT---------------------------AATGGTCCT------------------GCATTGTGG---GGTCTTATCTCTGGATTGGCTTATTTCACGATTGTTTTTGAGATC---------------TGG------AAA---GGTGGAGCTGCCAAATTAGCTGAAGCT------GCT---GGTGGAGCT---GTG---CTT---TCT---GCT---CAC---AAA---ACACTT---CTAAAATTTGTATTCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKA---A--GATK-SL------------MWK-LIFLSVIMLVTGYFGE---A------V--HT------------------T---G---------NGP------ALW-GLISGLAYFTIVFEI-----W--K-GGAAKLAEA--A-GGA-V-L-S-A-H-K-TL-LKFVFI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928532 [II-CFB-MS024] PRGD_OTU040_5c408db0d428e3bbd9f31af4943d8bfc gb|KJ928532| PRGD_OTU040_5c408db0d428e3bbd9f31af4943d8bfc, putative proteorhodopsin gene, partial cds. PRGD_OTU040_5c408db0d428e3bbd9f31af4943d8bfc, putative proteorhodopsin gene, partial cds. KJ928532 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (33.762, 29.175), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) GTGTTGACAGTTCCGTTAATGTGTGTAGAATTTTATCTTATTTTAAAAGCAGCTGGAGCTACTAAGTCATTGATGTGGAAACTTATTTTCCTTTCTGTAATCATGCTTGTAGCAGGTTACTTTGGAGAAGCTGTTCACACTACTGGTACTGGACCTGCATTATGGGGACTTATCTCTGGTTTGGCTTATTTCACAATTGTTTATGAAATTTGGAAAGGTGGTGCTTCAAAGTTAGCTGAAGCTGCTGGTGGAGCGGTTCTTTCTGCTCACAAAACACTATTGAAGTTTGTATTCATT VLTVPLMCVEFYLILKAAGATKSLMWKLIFLSVIMLVAGYFGEAVHTTGTGPALWGLISGLAYFTIVYEIWKGGASKLAEAAGGAVLSAHKTLLKFVFI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTTGACAGTTCCGTTAATGTGTGTAGAATTTTATCTTATTTTAAAAGCA---------GCT------GGAGCTACTAAG---TCATTG------------------------------------ATGTGGAAA---CTTATTTTCCTTTCTGTAATCATGCTTGTAGCAGGTTACTTTGGAGAA---------GCT------------------GTT------CACACT------------------------------------------------------ACT---------GGT---------------------------ACTGGACCT------------------GCATTATGG---GGACTTATCTCTGGTTTGGCTTATTTCACAATTGTTTATGAAATT---------------TGG------AAA---GGTGGTGCTTCAAAGTTAGCTGAAGCT------GCT---GGTGGAGCG---GTT---CTT---TCT---GCT---CAC---AAA---ACACTA---TTGAAGTTTGTATTCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKA---A--GATK-SL------------MWK-LIFLSVIMLVAGYFGE---A------V--HT------------------T---G---------TGP------ALW-GLISGLAYFTIVYEI-----W--K-GGASKLAEA--A-GGA-V-L-S-A-H-K-TL-LKFVFI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928543 [II-CFB-MS024] PRGD_OTU040_e5509233839ea32d7362ec2098931a3a gb|KJ928543| PRGD_OTU040_e5509233839ea32d7362ec2098931a3a, putative proteorhodopsin gene, partial cds. PRGD_OTU040_e5509233839ea32d7362ec2098931a3a, putative proteorhodopsin gene, partial cds. KJ928543 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) GTGTTGACTGTTCCTTTAATGTGTGTAGAATTTTATCTTATTTTAAAAGCGGCTGGAGCTACTAAGTCATTGATGTGGAAACTTATTTTCCTTTCTGTAATCATGCTTGTAGCAGGTTACTTTGGAGAAGCTGTTCACACTACAGGAACTGGACCTGCATTATGGGGACTTATCTCTGGTTTGGCTTATTTCACGATTGTTTACGAAATTTGGAAAGGTGGAGCTGCAAAGCTAGCTGAAGCTGCTGGTGGTGCCGTACTTTCTGCTCACAAAACACTATTGAAGTTTGTATTCATT VLTVPLMCVEFYLILKAAGATKSLMWKLIFLSVIMLVAGYFGEAVHTTGTGPALWGLISGLAYFTIVYEIWKGGAAKLAEAAGGAVLSAHKTLLKFVFI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTTGACTGTTCCTTTAATGTGTGTAGAATTTTATCTTATTTTAAAAGCG---------GCT------GGAGCTACTAAG---TCATTG------------------------------------ATGTGGAAA---CTTATTTTCCTTTCTGTAATCATGCTTGTAGCAGGTTACTTTGGAGAA---------GCT------------------GTT------CACACT------------------------------------------------------ACA---------GGA---------------------------ACTGGACCT------------------GCATTATGG---GGACTTATCTCTGGTTTGGCTTATTTCACGATTGTTTACGAAATT---------------TGG------AAA---GGTGGAGCTGCAAAGCTAGCTGAAGCT------GCT---GGTGGTGCC---GTA---CTT---TCT---GCT---CAC---AAA---ACACTA---TTGAAGTTTGTATTCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKA---A--GATK-SL------------MWK-LIFLSVIMLVAGYFGE---A------V--HT------------------T---G---------TGP------ALW-GLISGLAYFTIVYEI-----W--K-GGAAKLAEA--A-GGA-V-L-S-A-H-K-TL-LKFVFI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928538 [II-CFB-MS024] PRGD_OTU040_ad69720f2a0c35fad7bb9dc70af4f586 gb|KJ928538| PRGD_OTU040_ad69720f2a0c35fad7bb9dc70af4f586, putative proteorhodopsin gene, partial cds. PRGD_OTU040_ad69720f2a0c35fad7bb9dc70af4f586, putative proteorhodopsin gene, partial cds. KJ928538 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.935 18.508 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (33.762, 29.175; 33.935, 18.508) GTGTTGACTGTGCCGTTAATGTGTGTTGAATTTTACTTAATCCTAAAAGCTGCTGGAGCAACTAAGCAATTGATGTGGAAATTAATCTTCCTTTCAGTAATCATGCTTGTAACAGGTTACTTCGGAGAAGCAGTTCACACTACTGGTAATGGTCCTGCATTATGGGGTCTTATCTCTGGATTAGCTTACTTTGCAATTGTTTTTGAAATCTGGAAAGGTGGGGCTGCAAAACTAGCTGAAGCTGCTGGTGGTGCTGTACTTTCTGCTCACAAAACTCTTTTGAAGTTTGTATTCATC VLTVPLMCVEFYLILKAAGATKQLMWKLIFLSVIMLVTGYFGEAVHTTGNGPALWGLISGLAYFAIVFEIWKGGAAKLAEAAGGAVLSAHKTLLKFVFI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTTGACTGTGCCGTTAATGTGTGTTGAATTTTACTTAATCCTAAAAGCT---------GCT------GGAGCAACTAAG---CAATTG------------------------------------ATGTGGAAA---TTAATCTTCCTTTCAGTAATCATGCTTGTAACAGGTTACTTCGGAGAA---------GCA------------------GTT------CACACT------------------------------------------------------ACT---------GGT---------------------------AATGGTCCT------------------GCATTATGG---GGTCTTATCTCTGGATTAGCTTACTTTGCAATTGTTTTTGAAATC---------------TGG------AAA---GGTGGGGCTGCAAAACTAGCTGAAGCT------GCT---GGTGGTGCT---GTA---CTT---TCT---GCT---CAC---AAA---ACTCTT---TTGAAGTTTGTATTCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKA---A--GATK-QL------------MWK-LIFLSVIMLVTGYFGE---A------V--HT------------------T---G---------NGP------ALW-GLISGLAYFAIVFEI-----W--K-GGAAKLAEA--A-GGA-V-L-S-A-H-K-TL-LKFVFI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928984 [II-CFB-MS024] PRGD_OTU065_f6ecc567d7e0a09334a291f145007a81 gb|KJ928984| PRGD_OTU065_f6ecc567d7e0a09334a291f145007a81, putative proteorhodopsin gene, partial cds. PRGD_OTU065_f6ecc567d7e0a09334a291f145007a81, putative proteorhodopsin gene, partial cds. KJ928984 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) ATCTTAACTGTTCCTTTAATGTGCGTTGAGTTTTATTTAATCTTAAAAGCTGCTGGTGCAACTAAACAACTTATGTGGAAATTAATTCTTTTATCCACTGTAATGCTTGTTGCTGGTTACTTTGGCGAGGGTGTTTACACTGGTGGTAACGGTCCTGCACTTTGGGGTCTAATCTCTGGTCTAGCTTACTTTGCAATTGTTTATGAAATTTGGAAAGGTGAAGCTTCTAAACTAGCTGCGTCTGCTGGCGGAGCTGTTCTTTCTGCTCACAAAACACTTGTAAAATTTGTTGTAATT ILTVPLMCVEFYLILKAAGATKQLMWKLILLSTVMLVAGYFGEGVYTGGNGPALWGLISGLAYFAIVYEIWKGEASKLAASAGGAVLSAHKTLVKFVVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAACTGTTCCTTTAATGTGCGTTGAGTTTTATTTAATCTTAAAAGCT---------GCT------GGTGCAACTAAA---CAACTT------------------------------------ATGTGGAAA---TTAATTCTTTTATCCACTGTAATGCTTGTTGCTGGTTACTTTGGCGAG---------GGT------------------GTT------TACACT------------------------------------------------------GGT---------GGT---------------------------AACGGTCCT------------------GCACTTTGG---GGTCTAATCTCTGGTCTAGCTTACTTTGCAATTGTTTATGAAATT---------------TGG------AAA---GGTGAAGCTTCTAAACTAGCTGCGTCT------GCT---GGCGGAGCT---GTT---CTT---TCT---GCT---CAC---AAA---ACACTT---GTAAAATTTGTTGTAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATK-QL------------MWK-LILLSTVMLVAGYFGE---G------V--YT------------------G---G---------NGP------ALW-GLISGLAYFAIVYEI-----W--K-GEASKLAAS--A-GGA-V-L-S-A-H-K-TL-VKFVVI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928983 [II-CFB-MS024] PRGD_OTU065_e8296a735d826c62a0da209b5b4db278 gb|KJ928983| PRGD_OTU065_e8296a735d826c62a0da209b5b4db278, putative proteorhodopsin gene, partial cds. PRGD_OTU065_e8296a735d826c62a0da209b5b4db278, putative proteorhodopsin gene, partial cds. KJ928983 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) ATCTTAACTGTTCCTTTAATGTGCGTTGAGTTTTATTTAATCTTAAAAGCTGCTGGTGCAACGAAGCAACTTATGTGGAAATTAATTCTTTTATCCACTGTAATGCTTGTTGCTGGTTACTTTGGCGAAGGTGTTTACACTGGTGGTAACGGTCCTGCACTTTGGGGTCTAATCTCTGGTCTAGCTTACTTTGCAATTGTTTATGAAATTTGGAAAGGTGAAGCTTCTAAACTAGCTGCGTCTGCTGGCGGAGCTGTTCTTTCTGCTCACAAAACACTTGTAAAGTTTGTTGTAATT ILTVPLMCVEFYLILKAAGATKQLMWKLILLSTVMLVAGYFGEGVYTGGNGPALWGLISGLAYFAIVYEIWKGEASKLAASAGGAVLSAHKTLVKFVVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAACTGTTCCTTTAATGTGCGTTGAGTTTTATTTAATCTTAAAAGCT---------GCT------GGTGCAACGAAG---CAACTT------------------------------------ATGTGGAAA---TTAATTCTTTTATCCACTGTAATGCTTGTTGCTGGTTACTTTGGCGAA---------GGT------------------GTT------TACACT------------------------------------------------------GGT---------GGT---------------------------AACGGTCCT------------------GCACTTTGG---GGTCTAATCTCTGGTCTAGCTTACTTTGCAATTGTTTATGAAATT---------------TGG------AAA---GGTGAAGCTTCTAAACTAGCTGCGTCT------GCT---GGCGGAGCT---GTT---CTT---TCT---GCT---CAC---AAA---ACACTT---GTAAAGTTTGTTGTAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATK-QL------------MWK-LILLSTVMLVAGYFGE---G------V--YT------------------G---G---------NGP------ALW-GLISGLAYFAIVYEI-----W--K-GEASKLAAS--A-GGA-V-L-S-A-H-K-TL-VKFVVI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928977 [II-CFB-MS024] PRGD_OTU065_a1f1e2de0f4634d77016fa8f90e75f9e gb|KJ928977| PRGD_OTU065_a1f1e2de0f4634d77016fa8f90e75f9e, putative proteorhodopsin gene, partial cds. PRGD_OTU065_a1f1e2de0f4634d77016fa8f90e75f9e, putative proteorhodopsin gene, partial cds. KJ928977 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) ATCTTAACCGTTCCTTTAATGTGCGTTGAGTTTTATTTAATCTTAAAAGCAGCTGGTGCAACTAAACAACTTATGTGGAAATTAATTCTTTTATCTACTGTAATGCTTGTTGCTGGTTACTTTGGCGAAGGTGTTTACACTGGTGGAAACGGTCCTGCACTTTGGGGTCTAATCTCTGGTCTAGCTTACTTTGCAATTGTTTATGAAATTTGGAAAGGTGAAGCTTCTAAACTTGCAGCGTCAGCTGGTGGAGCTGTTCTTTCTGCTCACAAAACACTTGTAAAATTTGTTGTAATT ILTVPLMCVEFYLILKAAGATKQLMWKLILLSTVMLVAGYFGEGVYTGGNGPALWGLISGLAYFAIVYEIWKGEASKLAASAGGAVLSAHKTLVKFVVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAACCGTTCCTTTAATGTGCGTTGAGTTTTATTTAATCTTAAAAGCA---------GCT------GGTGCAACTAAA---CAACTT------------------------------------ATGTGGAAA---TTAATTCTTTTATCTACTGTAATGCTTGTTGCTGGTTACTTTGGCGAA---------GGT------------------GTT------TACACT------------------------------------------------------GGT---------GGA---------------------------AACGGTCCT------------------GCACTTTGG---GGTCTAATCTCTGGTCTAGCTTACTTTGCAATTGTTTATGAAATT---------------TGG------AAA---GGTGAAGCTTCTAAACTTGCAGCGTCA------GCT---GGTGGAGCT---GTT---CTT---TCT---GCT---CAC---AAA---ACACTT---GTAAAATTTGTTGTAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATK-QL------------MWK-LILLSTVMLVAGYFGE---G------V--YT------------------G---G---------NGP------ALW-GLISGLAYFAIVYEI-----W--K-GEASKLAAS--A-GGA-V-L-S-A-H-K-TL-VKFVVI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928985 [II-CFB-MS024] PRGD_OTU065_fd87bc2c87d980aaaebacac2fec5877d gb|KJ928985| PRGD_OTU065_fd87bc2c87d980aaaebacac2fec5877d, putative proteorhodopsin gene, partial cds. PRGD_OTU065_fd87bc2c87d980aaaebacac2fec5877d, putative proteorhodopsin gene, partial cds. KJ928985 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) ATCTTAACTGTTCCTTTAATGTGTGTTGAGTTTTATTTAATCTTAAAAGCAGCTGGTGCAACTAAGCAACTTATGTGGAAGTTAATTCTTTTATCCACTGTAATGCTTGTTGCTGGTTACTTCGGCGAAGGTGTTTACACTGGTGGAAACGGTCCTGCACTTTGGGGTCTAATCTCTGGTCTAGCTTACTTTGCAATTGTTTATGAAATTTGGAAAGGTGAAGCTTCTAAACTAGCTGCATCAGCAGGCGGAGCTGTTCTTTCTGCTCATAAAACGCTTGTAAAATTTGTTGTAATC ILTVPLMCVEFYLILKAAGATKQLMWKLILLSTVMLVAGYFGEGVYTGGNGPALWGLISGLAYFAIVYEIWKGEASKLAASAGGAVLSAHKTLVKFVVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAACTGTTCCTTTAATGTGTGTTGAGTTTTATTTAATCTTAAAAGCA---------GCT------GGTGCAACTAAG---CAACTT------------------------------------ATGTGGAAG---TTAATTCTTTTATCCACTGTAATGCTTGTTGCTGGTTACTTCGGCGAA---------GGT------------------GTT------TACACT------------------------------------------------------GGT---------GGA---------------------------AACGGTCCT------------------GCACTTTGG---GGTCTAATCTCTGGTCTAGCTTACTTTGCAATTGTTTATGAAATT---------------TGG------AAA---GGTGAAGCTTCTAAACTAGCTGCATCA------GCA---GGCGGAGCT---GTT---CTT---TCT---GCT---CAT---AAA---ACGCTT---GTAAAATTTGTTGTAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATK-QL------------MWK-LILLSTVMLVAGYFGE---G------V--YT------------------G---G---------NGP------ALW-GLISGLAYFAIVYEI-----W--K-GEASKLAAS--A-GGA-V-L-S-A-H-K-TL-VKFVVI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928982 [II-CFB-MS024] PRGD_OTU065_e54e3bb85ad95d7814d89aeed78cd4eb gb|KJ928982| PRGD_OTU065_e54e3bb85ad95d7814d89aeed78cd4eb, putative proteorhodopsin gene, partial cds. PRGD_OTU065_e54e3bb85ad95d7814d89aeed78cd4eb, putative proteorhodopsin gene, partial cds. KJ928982 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) ATCTTAACTGTTCCATTAATGTGTGTTGAGTTTTATTTAATCCTAAAAGCAGCTGGTGCAACTAAGCAACTTATGTGGAAATTAATTCTTTTATCCACTGTAATGCTTGTTGCTGGTTACTTTGGCGAAGGTGTTTACACTGGTGGAAACGGTCCCGCACTTTGGGGTCTAATCTCTGGTCTAGCTTACTTTGCAATTGTTTATGAAATTTGGAAAGGTGAAGCATCAAAACTAGCAGCGTCTGCTGGTGGAGCTGTTCTTTCTGCTCACAAAACACTTGTAAAATTTGTCGTAATC ILTVPLMCVEFYLILKAAGATKQLMWKLILLSTVMLVAGYFGEGVYTGGNGPALWGLISGLAYFAIVYEIWKGEASKLAASAGGAVLSAHKTLVKFVVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAACTGTTCCATTAATGTGTGTTGAGTTTTATTTAATCCTAAAAGCA---------GCT------GGTGCAACTAAG---CAACTT------------------------------------ATGTGGAAA---TTAATTCTTTTATCCACTGTAATGCTTGTTGCTGGTTACTTTGGCGAA---------GGT------------------GTT------TACACT------------------------------------------------------GGT---------GGA---------------------------AACGGTCCC------------------GCACTTTGG---GGTCTAATCTCTGGTCTAGCTTACTTTGCAATTGTTTATGAAATT---------------TGG------AAA---GGTGAAGCATCAAAACTAGCAGCGTCT------GCT---GGTGGAGCT---GTT---CTT---TCT---GCT---CAC---AAA---ACACTT---GTAAAATTTGTCGTAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATK-QL------------MWK-LILLSTVMLVAGYFGE---G------V--YT------------------G---G---------NGP------ALW-GLISGLAYFAIVYEI-----W--K-GEASKLAAS--A-GGA-V-L-S-A-H-K-TL-VKFVVI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928981 [II-CFB-MS024] PRGD_OTU065_d2f0818739f762a65d9d68bb5d91ee8a gb|KJ928981| PRGD_OTU065_d2f0818739f762a65d9d68bb5d91ee8a, putative proteorhodopsin gene, partial cds. PRGD_OTU065_d2f0818739f762a65d9d68bb5d91ee8a, putative proteorhodopsin gene, partial cds. KJ928981 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) ATCTTAACTGTTCCATTAATGTGTGTTGAGTTTTATTTAATCTTGAAAGCAGCTGGTGCAACTAAGCAACTTATGTGGAAATTAATTCTTTTATCCACTGTAATGCTTGTTGCTGGTTACTTTGGCGAAGGTGTTTACACTGGTGGAAACGGTCCCGCACTTTGGGGTCTAATCTCTGGTCTAGCTTACTTTGCAATTGTTTATGAAATTTGGAAAGGCGAAGCTTCAAAACTAGCAGCGTCTGCTGGTGGAGCTGTTCTTTCTGCTCACAAAACACTTGTAAAATTTGTCGTAATC ILTVPLMCVEFYLILKAAGATKQLMWKLILLSTVMLVAGYFGEGVYTGGNGPALWGLISGLAYFAIVYEIWKGEASKLAASAGGAVLSAHKTLVKFVVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAACTGTTCCATTAATGTGTGTTGAGTTTTATTTAATCTTGAAAGCA---------GCT------GGTGCAACTAAG---CAACTT------------------------------------ATGTGGAAA---TTAATTCTTTTATCCACTGTAATGCTTGTTGCTGGTTACTTTGGCGAA---------GGT------------------GTT------TACACT------------------------------------------------------GGT---------GGA---------------------------AACGGTCCC------------------GCACTTTGG---GGTCTAATCTCTGGTCTAGCTTACTTTGCAATTGTTTATGAAATT---------------TGG------AAA---GGCGAAGCTTCAAAACTAGCAGCGTCT------GCT---GGTGGAGCT---GTT---CTT---TCT---GCT---CAC---AAA---ACACTT---GTAAAATTTGTCGTAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATK-QL------------MWK-LILLSTVMLVAGYFGE---G------V--YT------------------G---G---------NGP------ALW-GLISGLAYFAIVYEI-----W--K-GEASKLAAS--A-GGA-V-L-S-A-H-K-TL-VKFVVI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928978 [II-CFB-MS024] PRGD_OTU065_a5503c972cecc617eec410d7d26719ba gb|KJ928978| PRGD_OTU065_a5503c972cecc617eec410d7d26719ba, putative proteorhodopsin gene, partial cds. PRGD_OTU065_a5503c972cecc617eec410d7d26719ba, putative proteorhodopsin gene, partial cds. KJ928978 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) ATCTTAACTGTTCCATTAATGTGTGTTGAGTTTTATTTAATCTTAAAAGCAGCTGGTGCAACTAAGCAACTTATGTGGAAATTAATTCTTTTATCCACTGTAATGCTTGTTGCTGGTTACTTTGGCGAAGGTGTTTACACTGGTGGAAACGGTCCCGCACTGTGGGGTCTAATCTCCGGTCTAGCTTACTTTGCAATTGTTTATGAAATTTGGAAAGGTGAAGCTTCAAAACTAGCTGCGTCTGCTGGTGGAGCCGTTCTTTCTGCTCACAAAACACTTGTAAAATTTGTCGTAATC ILTVPLMCVEFYLILKAAGATKQLMWKLILLSTVMLVAGYFGEGVYTGGNGPALWGLISGLAYFAIVYEIWKGEASKLAASAGGAVLSAHKTLVKFVVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAACTGTTCCATTAATGTGTGTTGAGTTTTATTTAATCTTAAAAGCA---------GCT------GGTGCAACTAAG---CAACTT------------------------------------ATGTGGAAA---TTAATTCTTTTATCCACTGTAATGCTTGTTGCTGGTTACTTTGGCGAA---------GGT------------------GTT------TACACT------------------------------------------------------GGT---------GGA---------------------------AACGGTCCC------------------GCACTGTGG---GGTCTAATCTCCGGTCTAGCTTACTTTGCAATTGTTTATGAAATT---------------TGG------AAA---GGTGAAGCTTCAAAACTAGCTGCGTCT------GCT---GGTGGAGCC---GTT---CTT---TCT---GCT---CAC---AAA---ACACTT---GTAAAATTTGTCGTAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATK-QL------------MWK-LILLSTVMLVAGYFGE---G------V--YT------------------G---G---------NGP------ALW-GLISGLAYFAIVYEI-----W--K-GEASKLAAS--A-GGA-V-L-S-A-H-K-TL-VKFVVI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928979 [II-CFB-MS024] PRGD_OTU065_c45912a27dedc63fc63fa988b2022c49 gb|KJ928979| PRGD_OTU065_c45912a27dedc63fc63fa988b2022c49, putative proteorhodopsin gene, partial cds. PRGD_OTU065_c45912a27dedc63fc63fa988b2022c49, putative proteorhodopsin gene, partial cds. KJ928979 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) ATCTTAACTGTTCCATTAATGTGTGTTGAGTTTTATTTAATCTTAAAAGCAGCTGGTGCAACGAAGCAACTTATGTGGAAATTAATTCTTTTATCCACTGTAATGCTTGTTGCTGGTTACTTTGGCGAAGGTGTTTACACTGGTGGAAACGGTCCCGCACTTTGGGGTCTAATCTCTGGTCTAGCTTACTTTGCAATTGTTTATGAAATTTGGAAAGGTGAAGCTTCAAAACTAGCTGCGACTGCTGGTGGAGCCGTTCTTTCTGCTCACAAAACACTTGTAAAATTTGTCGTAATC ILTVPLMCVEFYLILKAAGATKQLMWKLILLSTVMLVAGYFGEGVYTGGNGPALWGLISGLAYFAIVYEIWKGEASKLAATAGGAVLSAHKTLVKFVVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAACTGTTCCATTAATGTGTGTTGAGTTTTATTTAATCTTAAAAGCA---------GCT------GGTGCAACGAAG---CAACTT------------------------------------ATGTGGAAA---TTAATTCTTTTATCCACTGTAATGCTTGTTGCTGGTTACTTTGGCGAA---------GGT------------------GTT------TACACT------------------------------------------------------GGT---------GGA---------------------------AACGGTCCC------------------GCACTTTGG---GGTCTAATCTCTGGTCTAGCTTACTTTGCAATTGTTTATGAAATT---------------TGG------AAA---GGTGAAGCTTCAAAACTAGCTGCGACT------GCT---GGTGGAGCC---GTT---CTT---TCT---GCT---CAC---AAA---ACACTT---GTAAAATTTGTCGTAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATK-QL------------MWK-LILLSTVMLVAGYFGE---G------V--YT------------------G---G---------NGP------ALW-GLISGLAYFAIVYEI-----W--K-GEASKLAAT--A-GGA-V-L-S-A-H-K-TL-VKFVVI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928974 [II-CFB-MS024] PRGD_OTU065_1bc57ab1b3cc990e9e21849dbb2ac509 gb|KJ928974| PRGD_OTU065_1bc57ab1b3cc990e9e21849dbb2ac509, putative proteorhodopsin gene, partial cds. PRGD_OTU065_1bc57ab1b3cc990e9e21849dbb2ac509, putative proteorhodopsin gene, partial cds. KJ928974 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) ATCTTAACTGTTCCTTTAATGTGTGTTGAGTTTTATTTAATCTTAAAAGCAGCTGGTGCAACGAAGCAACTTATGTGGAAATTAATTCTTTTATCCACCGTAATGCTTGTTGCTGGTTACTTTGGTGAAGGTGTTTACACTGGTGGAAACGGTCCTGCACTTTGGGGTCTAATATCTGGTCTAGCTTACTTTGCAATTGTTTATGAAATTTGGAAAGGTGAAGCTTCAAAACTAGCTGCTTCTGCTGGTGGAGCTGTTCTTTCTGCTCACAAAACTCTTGTAAAATTCGTCGTAATT ILTVPLMCVEFYLILKAAGATKQLMWKLILLSTVMLVAGYFGEGVYTGGNGPALWGLISGLAYFAIVYEIWKGEASKLAASAGGAVLSAHKTLVKFVVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAACTGTTCCTTTAATGTGTGTTGAGTTTTATTTAATCTTAAAAGCA---------GCT------GGTGCAACGAAG---CAACTT------------------------------------ATGTGGAAA---TTAATTCTTTTATCCACCGTAATGCTTGTTGCTGGTTACTTTGGTGAA---------GGT------------------GTT------TACACT------------------------------------------------------GGT---------GGA---------------------------AACGGTCCT------------------GCACTTTGG---GGTCTAATATCTGGTCTAGCTTACTTTGCAATTGTTTATGAAATT---------------TGG------AAA---GGTGAAGCTTCAAAACTAGCTGCTTCT------GCT---GGTGGAGCT---GTT---CTT---TCT---GCT---CAC---AAA---ACTCTT---GTAAAATTCGTCGTAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATK-QL------------MWK-LILLSTVMLVAGYFGE---G------V--YT------------------G---G---------NGP------ALW-GLISGLAYFAIVYEI-----W--K-GEASKLAAS--A-GGA-V-L-S-A-H-K-TL-VKFVVI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928980 [II-CFB-MS024] PRGD_OTU065_cd0a8a747642d448d70750969a0ff941 gb|KJ928980| PRGD_OTU065_cd0a8a747642d448d70750969a0ff941, putative proteorhodopsin gene, partial cds. PRGD_OTU065_cd0a8a747642d448d70750969a0ff941, putative proteorhodopsin gene, partial cds. KJ928980 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) ATCTTAACTGTTCCATTAATGTGTGTTGAGTTTTATTTAATCTTAAAAGCAGCTGGTGCAACAAAGCAGCTTATGTGGAAATTAATTCTTTTATCCACCGTAATGCTTGTTGCTGGTTACTTTGGTGAAGGTGTTTACACTGGTGGAAACGGTCCTGCACTTTGGGGTCTAATATCTGGTCTAGCTTACTTTGCAATTGTTTATGAAATTTGGAAAGGTGAAGCTTCAAAACTAGCTGCTTCTGCTGGTGGAGCTGTTCTTTCTGCTCACAAAACTCTTGTAAAATTTGTCGTAATT ILTVPLMCVEFYLILKAAGATKQLMWKLILLSTVMLVAGYFGEGVYTGGNGPALWGLISGLAYFAIVYEIWKGEASKLAASAGGAVLSAHKTLVKFVVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAACTGTTCCATTAATGTGTGTTGAGTTTTATTTAATCTTAAAAGCA---------GCT------GGTGCAACAAAG---CAGCTT------------------------------------ATGTGGAAA---TTAATTCTTTTATCCACCGTAATGCTTGTTGCTGGTTACTTTGGTGAA---------GGT------------------GTT------TACACT------------------------------------------------------GGT---------GGA---------------------------AACGGTCCT------------------GCACTTTGG---GGTCTAATATCTGGTCTAGCTTACTTTGCAATTGTTTATGAAATT---------------TGG------AAA---GGTGAAGCTTCAAAACTAGCTGCTTCT------GCT---GGTGGAGCT---GTT---CTT---TCT---GCT---CAC---AAA---ACTCTT---GTAAAATTTGTCGTAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATK-QL------------MWK-LILLSTVMLVAGYFGE---G------V--YT------------------G---G---------NGP------ALW-GLISGLAYFAIVYEI-----W--K-GEASKLAAS--A-GGA-V-L-S-A-H-K-TL-VKFVVI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928975 [II-CFB-MS024] PRGD_OTU065_6832c3f8215cf4b8b533c18abad8480d gb|KJ928975| PRGD_OTU065_6832c3f8215cf4b8b533c18abad8480d, putative proteorhodopsin gene, partial cds. PRGD_OTU065_6832c3f8215cf4b8b533c18abad8480d, putative proteorhodopsin gene, partial cds. KJ928975 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) ATCTTAACTGTTCCTTTAATGTGTGTTGAGTTTTATTTAATCTTAAAAGCAGCAGGTGCTACAAAGCAATTAATGTGGAAATTAATTCTTTTATCCACTGTAATGCTTGTTGCTGGTTACTTTGGCGAAGGTGTTTACACTGGTGGAAATGGTCCTGCACTTTGGGGTCTAATATCTGGTCTTGCTTACTTTGCAATTGTTTATGAAATTTGGAAAGGTGAAGCTTCAAAATTAGCTGCTTCAGCTGGTGGAGCTGTTCTATCTGCTCATAAAACACTTGTAAAATTTGTCGTAATT ILTVPLMCVEFYLILKAAGATKQLMWKLILLSTVMLVAGYFGEGVYTGGNGPALWGLISGLAYFAIVYEIWKGEASKLAASAGGAVLSAHKTLVKFVVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAACTGTTCCTTTAATGTGTGTTGAGTTTTATTTAATCTTAAAAGCA---------GCA------GGTGCTACAAAG---CAATTA------------------------------------ATGTGGAAA---TTAATTCTTTTATCCACTGTAATGCTTGTTGCTGGTTACTTTGGCGAA---------GGT------------------GTT------TACACT------------------------------------------------------GGT---------GGA---------------------------AATGGTCCT------------------GCACTTTGG---GGTCTAATATCTGGTCTTGCTTACTTTGCAATTGTTTATGAAATT---------------TGG------AAA---GGTGAAGCTTCAAAATTAGCTGCTTCA------GCT---GGTGGAGCT---GTT---CTA---TCT---GCT---CAT---AAA---ACACTT---GTAAAATTTGTCGTAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATK-QL------------MWK-LILLSTVMLVAGYFGE---G------V--YT------------------G---G---------NGP------ALW-GLISGLAYFAIVYEI-----W--K-GEASKLAAS--A-GGA-V-L-S-A-H-K-TL-VKFVVI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928973 [II-CFB-MS024] PRGD_OTU065_180a3c44b135eaa9262f8c862648e3d0 gb|KJ928973| PRGD_OTU065_180a3c44b135eaa9262f8c862648e3d0, putative proteorhodopsin gene, partial cds. PRGD_OTU065_180a3c44b135eaa9262f8c862648e3d0, putative proteorhodopsin gene, partial cds. KJ928973 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) ATTTTGACAGTTCCTTTAATGTGTGTTGAGTTTTATTTAATTTTAAAAGCAGCTGGTGCAACTAAGCAACTAATGTGGAAATTAATTCTATTATCTACTGTAATGCTAGTGGCTGGTTACTTTGGCGAAGGAGTTTACACAGGTGGAACTGGTCCTGCATTATGGGGTCTAATATCTGGTTTAGCTTATTTTGCTATTGTTTATGAAATTTGGAAAGGTGAAGCATCTAAGCTAGCAGCCGCTGCTGGTGGAGCTGTTCTATCTGCTCACAAAACACTTGTTAAGTTTGTCGTAATT ILTVPLMCVEFYLILKAAGATKQLMWKLILLSTVMLVAGYFGEGVYTGGTGPALWGLISGLAYFAIVYEIWKGEASKLAAAAGGAVLSAHKTLVKFVVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTGACAGTTCCTTTAATGTGTGTTGAGTTTTATTTAATTTTAAAAGCA---------GCT------GGTGCAACTAAG---CAACTA------------------------------------ATGTGGAAA---TTAATTCTATTATCTACTGTAATGCTAGTGGCTGGTTACTTTGGCGAA---------GGA------------------GTT------TACACA------------------------------------------------------GGT---------GGA---------------------------ACTGGTCCT------------------GCATTATGG---GGTCTAATATCTGGTTTAGCTTATTTTGCTATTGTTTATGAAATT---------------TGG------AAA---GGTGAAGCATCTAAGCTAGCAGCCGCT------GCT---GGTGGAGCT---GTT---CTA---TCT---GCT---CAC---AAA---ACACTT---GTTAAGTTTGTCGTAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATK-QL------------MWK-LILLSTVMLVAGYFGE---G------V--YT------------------G---G---------TGP------ALW-GLISGLAYFAIVYEI-----W--K-GEASKLAAA--A-GGA-V-L-S-A-H-K-TL-VKFVVI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928972 [II-CFB-MS024] PRGD_OTU065_otuREP_f2335bfeee52c5380a8d9da0756ea445 gb|KJ928972| PRGD_OTU065_otuREP_f2335bfeee52c5380a8d9da0756ea445, putative proteorhodopsin gene, partial cds. PRGD_OTU065_otuREP_f2335bfeee52c5380a8d9da0756ea445, putative proteorhodopsin gene, partial cds. KJ928972 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45) ATTTTGACAGTTCCTTTAATGTGTGTTGAGTTTTATTTAATTTTAAAAGCAGCTGGTGCAACTAAGCAATTAATGTGGAAACTAATTCTGTTATCTACTGTAATGTTAGTTGCTGGTTACTTTGGCGAAGGAGTTTATACAAGTGGAACTGGTCCTGCATTATGGGGTCTAATATCTGGTTTGGCTTATTTTGCTATTGTTTATGAAATTTGGAAAGGTGAAGCATCTAAGCTAGCTGCTGCTGCTGGTGGAGCTGTTCTATCTGCTCACAAAACACTTGTTAAGTTTGTCGTAATT ILTVPLMCVEFYLILKAAGATKQLMWKLILLSTVMLVAGYFGEGVYTSGTGPALWGLISGLAYFAIVYEIWKGEASKLAAAAGGAVLSAHKTLVKFVVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTGACAGTTCCTTTAATGTGTGTTGAGTTTTATTTAATTTTAAAAGCA---------GCT------GGTGCAACTAAG---CAATTA------------------------------------ATGTGGAAA---CTAATTCTGTTATCTACTGTAATGTTAGTTGCTGGTTACTTTGGCGAA---------GGA------------------GTT------TATACA------------------------------------------------------AGT---------GGA---------------------------ACTGGTCCT------------------GCATTATGG---GGTCTAATATCTGGTTTGGCTTATTTTGCTATTGTTTATGAAATT---------------TGG------AAA---GGTGAAGCATCTAAGCTAGCTGCTGCT------GCT---GGTGGAGCT---GTT---CTA---TCT---GCT---CAC---AAA---ACACTT---GTTAAGTTTGTCGTAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATK-QL------------MWK-LILLSTVMLVAGYFGE---G------V--YT------------------S---G---------TGP------ALW-GLISGLAYFAIVYEI-----W--K-GEASKLAAA--A-GGA-V-L-S-A-H-K-TL-VKFVVI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928976 [II-CFB-MS024] PRGD_OTU065_7142ce0029e5eff29771c57d8e26115c gb|KJ928976| PRGD_OTU065_7142ce0029e5eff29771c57d8e26115c, putative proteorhodopsin gene, partial cds. PRGD_OTU065_7142ce0029e5eff29771c57d8e26115c, putative proteorhodopsin gene, partial cds. KJ928976 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-35.05, 23.73; -14.48, 113.45) ATTTTGACTGTTCCACTAATGTGTGTAGAGTTTTACCTTATTCTTAAAGCAGCTGGAGCCACAAAATCATTAATGTGGAAACTAATTCTATTATCAACAGTAATGCTTGTAACTGGATACTTTGGTGAGGGTGTTTACACTAGTGGACAAGGTCCTGCACTTTGGGGTCTTATCTCTGGTTTAGCCTACTTTGCTATTGTATATGAAATATGGAAAGGTGGAGCTTCAAAGCTTGCAGAAGCTGCTGGAGGAGCTGTTCTTTCTGCTCACAAAACACTTGTGAAGTTTGTCGTAATT ILTVPLMCVEFYLILKAAGATKSLMWKLILLSTVMLVTGYFGEGVYTSGQGPALWGLISGLAYFAIVYEIWKGGASKLAEAAGGAVLSAHKTLVKFVVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTGACTGTTCCACTAATGTGTGTAGAGTTTTACCTTATTCTTAAAGCA---------GCT------GGAGCCACAAAA---TCATTA------------------------------------ATGTGGAAA---CTAATTCTATTATCAACAGTAATGCTTGTAACTGGATACTTTGGTGAG---------GGT------------------GTT------TACACT------------------------------------------------------AGT---------GGA---------------------------CAAGGTCCT------------------GCACTTTGG---GGTCTTATCTCTGGTTTAGCCTACTTTGCTATTGTATATGAAATA---------------TGG------AAA---GGTGGAGCTTCAAAGCTTGCAGAAGCT------GCT---GGAGGAGCT---GTT---CTT---TCT---GCT---CAC---AAA---ACACTT---GTGAAGTTTGTCGTAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATK-SL------------MWK-LILLSTVMLVTGYFGE---G------V--YT------------------S---G---------QGP------ALW-GLISGLAYFAIVYEI-----W--K-GGASKLAEA--A-GGA-V-L-S-A-H-K-TL-VKFVVI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928529 [II-CFB-MS024] PRGD_OTU040_18073cec5a3c021355243321a5bbaf34 gb|KJ928529| PRGD_OTU040_18073cec5a3c021355243321a5bbaf34, putative proteorhodopsin gene, partial cds. PRGD_OTU040_18073cec5a3c021355243321a5bbaf34, putative proteorhodopsin gene, partial cds. KJ928529 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; ; 67.49, -168.12) GTGTTGACTGTACCATTGATGTGTGTTGAATTCTATCTTATCCTTAAAGTTGCCGGTGCAACAAAGCAATTGATGTGGAAATTAATTTTCCTTTCAGTAATTATGCTTGTTACAGGTTACTTTGGAGAAGCAGTTTACACAACAGGAAATGGACCTGCAGTTTGGGGACTAGTTTCTGGACTCGCTTATTTCGCGATTGTTGCTGAACTATGGAAAGGTAGTGCTGCAAAACTAGCAGAATCTGCTGGCGGAGCTGTTCTTGCTGCGCACAAAACACTTCTTAAATTTGTTGTTATC VLTVPLMCVEFYLILKVAGATKQLMWKLIFLSVIMLVTGYFGEAVYTTGNGPAVWGLVSGLAYFAIVAELWKGSAAKLAESAGGAVLAAHKTLLKFVVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTTGACTGTACCATTGATGTGTGTTGAATTCTATCTTATCCTTAAAGTT---------GCC------GGTGCAACAAAG---CAATTG------------------------------------ATGTGGAAA---TTAATTTTCCTTTCAGTAATTATGCTTGTTACAGGTTACTTTGGAGAA---------GCA------------------GTT------TACACA------------------------------------------------------ACA---------GGA---------------------------AATGGACCT------------------GCAGTTTGG---GGACTAGTTTCTGGACTCGCTTATTTCGCGATTGTTGCTGAACTA---------------TGG------AAA---GGTAGTGCTGCAAAACTAGCAGAATCT------GCT---GGCGGAGCT---GTT---CTT---GCT---GCG---CAC---AAA---ACACTT---CTTAAATTTGTTGTTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKV---A--GATK-QL------------MWK-LIFLSVIMLVTGYFGE---A------V--YT------------------T---G---------NGP------AVW-GLVSGLAYFAIVAEL-----W--K-GSAAKLAES--A-GGA-V-L-A-A-H-K-TL-LKFVVI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928533 [II-CFB-MS024] PRGD_OTU040_643ee870ed23e3d4f6d9de08ac76bc62 gb|KJ928533| PRGD_OTU040_643ee870ed23e3d4f6d9de08ac76bc62, putative proteorhodopsin gene, partial cds. PRGD_OTU040_643ee870ed23e3d4f6d9de08ac76bc62, putative proteorhodopsin gene, partial cds. KJ928533 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264) GTGTTGACTGTACCATTGATGTGTGTTGAATTCTATCTTATCCTTAAAGTTGCCGGTGCAACAAAGCAATTGATGTGGAAATTAATTTTCCTTTCAGTTATTATGCTTGTTACAGGTTACTTTGGAGAAGCAGTTTACACAACAGGAAATGGGCCTGCAGTTTGGGGACTAGTTTCTGGACTCGCTTATTTCGCGATTGTTGCTGAACTATGGAAAGGTAGTGCTGCAAAACTAGCAGAATCTGCTGGCGGAGCTGTTCTTGCTGCGCACAAAACACTTCTTAAATTTGTTGTTATC VLTVPLMCVEFYLILKVAGATKQLMWKLIFLSVIMLVTGYFGEAVYTTGNGPAVWGLVSGLAYFAIVAELWKGSAAKLAESAGGAVLAAHKTLLKFVVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTTGACTGTACCATTGATGTGTGTTGAATTCTATCTTATCCTTAAAGTT---------GCC------GGTGCAACAAAG---CAATTG------------------------------------ATGTGGAAA---TTAATTTTCCTTTCAGTTATTATGCTTGTTACAGGTTACTTTGGAGAA---------GCA------------------GTT------TACACA------------------------------------------------------ACA---------GGA---------------------------AATGGGCCT------------------GCAGTTTGG---GGACTAGTTTCTGGACTCGCTTATTTCGCGATTGTTGCTGAACTA---------------TGG------AAA---GGTAGTGCTGCAAAACTAGCAGAATCT------GCT---GGCGGAGCT---GTT---CTT---GCT---GCG---CAC---AAA---ACACTT---CTTAAATTTGTTGTTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKV---A--GATK-QL------------MWK-LIFLSVIMLVTGYFGE---A------V--YT------------------T---G---------NGP------AVW-GLVSGLAYFAIVAEL-----W--K-GSAAKLAES--A-GGA-V-L-A-A-H-K-TL-LKFVVI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928525 [II-CFB-MS024] PRGD_OTU040_00c59e38c567c14c54b50924b93733b1 gb|KJ928525| PRGD_OTU040_00c59e38c567c14c54b50924b93733b1, putative proteorhodopsin gene, partial cds. PRGD_OTU040_00c59e38c567c14c54b50924b93733b1, putative proteorhodopsin gene, partial cds. KJ928525 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (69.5142, -133.4185; 67.49, -168.12) GTGTTGACTGTACCTTTGATGTGTGTTGAATTCTATCTTATCCTTAAAGTTGCCGGTGCAACAAAGCAATTGATGTGGAAATTAATTTTCCTTTCAGTAATTATGCTTGTTACTGGTTACTTTGGAGAAGCAGTTTACACAACAGGAAATGGACCTGCAGTTTGGGGACTAGTCTCTGGACTCGCTTATTTCGCGATTGTTGCTGAACTATGGAAAGGTAGTGCTGCAAAACTAGCAGAATCTGCTGGCGGAGCTGTTCTTGCTGCGCACAAAACACTTCTTAAATTTGTTGTTATC VLTVPLMCVEFYLILKVAGATKQLMWKLIFLSVIMLVTGYFGEAVYTTGNGPAVWGLVSGLAYFAIVAELWKGSAAKLAESAGGAVLAAHKTLLKFVVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTTGACTGTACCTTTGATGTGTGTTGAATTCTATCTTATCCTTAAAGTT---------GCC------GGTGCAACAAAG---CAATTG------------------------------------ATGTGGAAA---TTAATTTTCCTTTCAGTAATTATGCTTGTTACTGGTTACTTTGGAGAA---------GCA------------------GTT------TACACA------------------------------------------------------ACA---------GGA---------------------------AATGGACCT------------------GCAGTTTGG---GGACTAGTCTCTGGACTCGCTTATTTCGCGATTGTTGCTGAACTA---------------TGG------AAA---GGTAGTGCTGCAAAACTAGCAGAATCT------GCT---GGCGGAGCT---GTT---CTT---GCT---GCG---CAC---AAA---ACACTT---CTTAAATTTGTTGTTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKV---A--GATK-QL------------MWK-LIFLSVIMLVTGYFGE---A------V--YT------------------T---G---------NGP------AVW-GLVSGLAYFAIVAEL-----W--K-GSAAKLAES--A-GGA-V-L-A-A-H-K-TL-LKFVVI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928545 [II-CFB-MS024] PRGD_OTU040_f7a84ebc6ff4341ff1d8b05a7e35d7be gb|KJ928545| PRGD_OTU040_f7a84ebc6ff4341ff1d8b05a7e35d7be, putative proteorhodopsin gene, partial cds. PRGD_OTU040_f7a84ebc6ff4341ff1d8b05a7e35d7be, putative proteorhodopsin gene, partial cds. KJ928545 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781), Mediterranean Sea (33.935, 18.508) GTATTGACTGTACCATTAATGTGTGTTGAATTCTATCTTATCCTTAAAGTTGCTGGTGCAACAAAGCAATTGATGTGGAAATTAATTTTCCTTTCAGTAATAATGCTTGTTACTGGTTACTTTGGAGAAGCAGTTTACAATACAGGAAATGGACCTGCACTTTGGGGACTAGTTTCTGGACTCGCTTATTTCGCGATTGTTGCTGAACTCTGGAAAGGTGGTGCTGCAAAACTAGCAGCGTCTGCTGGTGGAGCTGTTCAAGCTGCACACACAACGCTTCTGAAATTTGTTGTTATT VLTVPLMCVEFYLILKVAGATKQLMWKLIFLSVIMLVTGYFGEAVYNTGNGPALWGLVSGLAYFAIVAELWKGGAAKLAASAGGAVQAAHTTLLKFVVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTGACTGTACCATTAATGTGTGTTGAATTCTATCTTATCCTTAAAGTT---------GCT------GGTGCAACAAAG---CAATTG------------------------------------ATGTGGAAA---TTAATTTTCCTTTCAGTAATAATGCTTGTTACTGGTTACTTTGGAGAA---------GCA------------------GTT------TACAAT------------------------------------------------------ACA---------GGA---------------------------AATGGACCT------------------GCACTTTGG---GGACTAGTTTCTGGACTCGCTTATTTCGCGATTGTTGCTGAACTC---------------TGG------AAA---GGTGGTGCTGCAAAACTAGCAGCGTCT------GCT---GGTGGAGCT---GTT---CAA---GCT---GCA---CAC---ACA---ACGCTT---CTGAAATTTGTTGTTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKV---A--GATK-QL------------MWK-LIFLSVIMLVTGYFGE---A------V--YN------------------T---G---------NGP------ALW-GLVSGLAYFAIVAEL-----W--K-GGAAKLAAS--A-GGA-V-Q-A-A-H-T-TL-LKFVVI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928546 [II-CFB-MS024] PRGD_OTU040_f902f5e3588e41d82b804643f989817f gb|KJ928546| PRGD_OTU040_f902f5e3588e41d82b804643f989817f, putative proteorhodopsin gene, partial cds. PRGD_OTU040_f902f5e3588e41d82b804643f989817f, putative proteorhodopsin gene, partial cds. KJ928546 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833) GTATTGACTGTACCATTAATGTGTGTTGAATTCTATCTTATCCTTAAAGTTGCTGGTGCAACAAAGCAATTGATGTGGAAATTAATTTTCCTTTCAGTAGTTATGCTTGTTACAGGTTACTTTGGAGAAGCAGTCTACACAACAGGAAATGGACCTGCACTTTGGGGACTAGTTTCTGGACTCGCTTATTTCGCGATTGTTGCTGAACTCTGGAAAGGTGGTGCTGCAAAACTAGCAGCGTCTGCTGGTGGAGCTGTTCAAGCTGCACACTCAACGCTTCTGAAATTTGTTGTTATT VLTVPLMCVEFYLILKVAGATKQLMWKLIFLSVVMLVTGYFGEAVYTTGNGPALWGLVSGLAYFAIVAELWKGGAAKLAASAGGAVQAAHSTLLKFVVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTGACTGTACCATTAATGTGTGTTGAATTCTATCTTATCCTTAAAGTT---------GCT------GGTGCAACAAAG---CAATTG------------------------------------ATGTGGAAA---TTAATTTTCCTTTCAGTAGTTATGCTTGTTACAGGTTACTTTGGAGAA---------GCA------------------GTC------TACACA------------------------------------------------------ACA---------GGA---------------------------AATGGACCT------------------GCACTTTGG---GGACTAGTTTCTGGACTCGCTTATTTCGCGATTGTTGCTGAACTC---------------TGG------AAA---GGTGGTGCTGCAAAACTAGCAGCGTCT------GCT---GGTGGAGCT---GTT---CAA---GCT---GCA---CAC---TCA---ACGCTT---CTGAAATTTGTTGTTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKV---A--GATK-QL------------MWK-LIFLSVVMLVTGYFGE---A------V--YT------------------T---G---------NGP------ALW-GLVSGLAYFAIVAEL-----W--K-GGAAKLAAS--A-GGA-V-Q-A-A-H-S-TL-LKFVVI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928534 [II-CFB-MS024] PRGD_OTU040_72ceef7d464c8975148525b16d39910c gb|KJ928534| PRGD_OTU040_72ceef7d464c8975148525b16d39910c, putative proteorhodopsin gene, partial cds. PRGD_OTU040_72ceef7d464c8975148525b16d39910c, putative proteorhodopsin gene, partial cds. KJ928534 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) GTGTTAACTGTTCCTTTAATGTGCGTTGAATTTTATTTAATCCTTAAAGCTGCTGGTGCAACAAAGCAATTGATGTGGAAATTAATTTTCCTCTCAGTAATTATGCTCGTGACTGGTTATTTTGGAGAAGCAGTACATACGACAGGTAATGGTCCTGCATTATGGGGCCTTGTATCTGGTTTGGCGTACTTTACAATCGTTTTCGAACTTTGGAAAGGTGGAGCTTCAAAATTAGCTGCGTCAGCTGGCGGAGCAGTTCAAGCGGCACACACTACTTTATTAAAGTTTGTTGTTATT VLTVPLMCVEFYLILKAAGATKQLMWKLIFLSVIMLVTGYFGEAVHTTGNGPALWGLVSGLAYFTIVFELWKGGASKLAASAGGAVQAAHTTLLKFVVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTTAACTGTTCCTTTAATGTGCGTTGAATTTTATTTAATCCTTAAAGCT---------GCT------GGTGCAACAAAG---CAATTG------------------------------------ATGTGGAAA---TTAATTTTCCTCTCAGTAATTATGCTCGTGACTGGTTATTTTGGAGAA---------GCA------------------GTA------CATACG------------------------------------------------------ACA---------GGT---------------------------AATGGTCCT------------------GCATTATGG---GGCCTTGTATCTGGTTTGGCGTACTTTACAATCGTTTTCGAACTT---------------TGG------AAA---GGTGGAGCTTCAAAATTAGCTGCGTCA------GCT---GGCGGAGCA---GTT---CAA---GCG---GCA---CAC---ACT---ACTTTA---TTAAAGTTTGTTGTTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKA---A--GATK-QL------------MWK-LIFLSVIMLVTGYFGE---A------V--HT------------------T---G---------NGP------ALW-GLVSGLAYFTIVFEL-----W--K-GGASKLAAS--A-GGA-V-Q-A-A-H-T-TL-LKFVVI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929019 [II-CFB-MS024] PRGD_OTU068_6abefef5aca63afd8f1bfb24833cd8ec gb|KJ929019| PRGD_OTU068_6abefef5aca63afd8f1bfb24833cd8ec, putative proteorhodopsin gene, partial cds. PRGD_OTU068_6abefef5aca63afd8f1bfb24833cd8ec, putative proteorhodopsin gene, partial cds. KJ929019 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTCTCACTGTTCCACTAATGTGCGTAGAGTTTTATTTAATTCTGAAAGCTGCTGGAGCGACAACTAAGTTAATGTGGAGAATGATCATGTTGTCAGTTGTAATGCTAGTGGCTGGGTACTTAGGTGAGGCAGTATACACAACAGGTGTAGGTCCTGCTGCTTGGGGGCTAGTTTCTGGTATAGCATATTTTGTTATAGTATATGATATATGGATGGGAGAAGCTAAAAAATTAGCTACATCTGCTGGTGGAGCTACATTATCAGCTCATAACATGCTATGTAAATTTGTATTAATT ILTVPLMCVEFYLILKAAGATTKLMWRMIMLSVVMLVAGYLGEAVYTTGVGPAAWGLVSGIAYFVIVYDIWMGEAKKLATSAGGATLSAHNMLCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTCACTGTTCCACTAATGTGCGTAGAGTTTTATTTAATTCTGAAAGCT---------GCT------GGAGCGACAACT---AAGTTA------------------------------------ATGTGGAGA---ATGATCATGTTGTCAGTTGTAATGCTAGTGGCTGGGTACTTAGGTGAG---------GCA------------------GTA------TACACA------------------------------------------------------ACA---------GGT---------------------------GTAGGTCCT------------------GCTGCTTGG---GGGCTAGTTTCTGGTATAGCATATTTTGTTATAGTATATGATATA---------------TGG------ATG---GGAGAAGCTAAAAAATTAGCTACATCT------GCT---GGTGGAGCT---ACA---TTA---TCA---GCT---CAT---AAC---ATGCTA---TGTAAATTTGTATTAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATT-KL------------MWR-MIMLSVVMLVAGYLGE---A------V--YT------------------T---G---------VGP------AAW-GLVSGIAYFVIVYDI-----W--M-GEAKKLATS--A-GGA-T-L-S-A-H-N-ML-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929023 [II-CFB-MS024] PRGD_OTU068_b1576a7be4b28ed7ef7c76ffe5875b6e gb|KJ929023| PRGD_OTU068_b1576a7be4b28ed7ef7c76ffe5875b6e, putative proteorhodopsin gene, partial cds. PRGD_OTU068_b1576a7be4b28ed7ef7c76ffe5875b6e, putative proteorhodopsin gene, partial cds. KJ929023 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) ATTCTCACTGTTCCACTAATGTGTGTAGAGTTTTATTTAATTCTGAAAGCTGCTGGAGCGACAACCAAGTTAATGTGGAGAATGATCATGTTGTCAGTTGTAATGTTAGTGGCTGGGTACTTAGGTGAGGCAGTATACACAACAGGTGTAGGTCCTGCTGCTTGGGGGCTAGTTTCTGGTATAGCATATTTTGTTATAGTATATGATATATGGATGGGAGAAGCTAAAAAATTAGCTACATCTGCTGGTGGAGCTACATTATCAGCTCATAACATGTTATGTAAATTTGTATTAATT ILTVPLMCVEFYLILKAAGATTKLMWRMIMLSVVMLVAGYLGEAVYTTGVGPAAWGLVSGIAYFVIVYDIWMGEAKKLATSAGGATLSAHNMLCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTCACTGTTCCACTAATGTGTGTAGAGTTTTATTTAATTCTGAAAGCT---------GCT------GGAGCGACAACC---AAGTTA------------------------------------ATGTGGAGA---ATGATCATGTTGTCAGTTGTAATGTTAGTGGCTGGGTACTTAGGTGAG---------GCA------------------GTA------TACACA------------------------------------------------------ACA---------GGT---------------------------GTAGGTCCT------------------GCTGCTTGG---GGGCTAGTTTCTGGTATAGCATATTTTGTTATAGTATATGATATA---------------TGG------ATG---GGAGAAGCTAAAAAATTAGCTACATCT------GCT---GGTGGAGCT---ACA---TTA---TCA---GCT---CAT---AAC---ATGTTA---TGTAAATTTGTATTAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATT-KL------------MWR-MIMLSVVMLVAGYLGE---A------V--YT------------------T---G---------VGP------AAW-GLVSGIAYFVIVYDI-----W--M-GEAKKLATS--A-GGA-T-L-S-A-H-N-ML-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929014 [II-CFB-MS024] PRGD_OTU068_0da6c04835e2d25b4870d162b060d48f gb|KJ929014| PRGD_OTU068_0da6c04835e2d25b4870d162b060d48f, putative proteorhodopsin gene, partial cds. PRGD_OTU068_0da6c04835e2d25b4870d162b060d48f, putative proteorhodopsin gene, partial cds. KJ929014 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTCTCACTGTTCCACTAATGTGTGTAGAGTTTTATTTAATTCTGAAAGCTGCTGGAGCGACAACCAAGTTAATGTGGAGAATGATCATGTTGTCAGTTGTAATGTTAGTGGCTGGGTACTTAGGTGAAGCAGTGTACACAACAGGTGTAGGTCCTGCTGCTTGGGGACTAGTTTCTGGTATAGCATATTTTGTTATAGTATATGATATATGGATGGGAGAAGCTAAAAAATTAGCTACATCTGCTGGTGGAGCTACATTATCAGCTCATAACATGTTATGTAAATTTGTATTAATT ILTVPLMCVEFYLILKAAGATTKLMWRMIMLSVVMLVAGYLGEAVYTTGVGPAAWGLVSGIAYFVIVYDIWMGEAKKLATSAGGATLSAHNMLCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTCACTGTTCCACTAATGTGTGTAGAGTTTTATTTAATTCTGAAAGCT---------GCT------GGAGCGACAACC---AAGTTA------------------------------------ATGTGGAGA---ATGATCATGTTGTCAGTTGTAATGTTAGTGGCTGGGTACTTAGGTGAA---------GCA------------------GTG------TACACA------------------------------------------------------ACA---------GGT---------------------------GTAGGTCCT------------------GCTGCTTGG---GGACTAGTTTCTGGTATAGCATATTTTGTTATAGTATATGATATA---------------TGG------ATG---GGAGAAGCTAAAAAATTAGCTACATCT------GCT---GGTGGAGCT---ACA---TTA---TCA---GCT---CAT---AAC---ATGTTA---TGTAAATTTGTATTAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATT-KL------------MWR-MIMLSVVMLVAGYLGE---A------V--YT------------------T---G---------VGP------AAW-GLVSGIAYFVIVYDI-----W--M-GEAKKLATS--A-GGA-T-L-S-A-H-N-ML-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929017 [II-CFB-MS024] PRGD_OTU068_39c3aa08a05139c3fb4d95793e00df2a gb|KJ929017| PRGD_OTU068_39c3aa08a05139c3fb4d95793e00df2a, putative proteorhodopsin gene, partial cds. PRGD_OTU068_39c3aa08a05139c3fb4d95793e00df2a, putative proteorhodopsin gene, partial cds. KJ929017 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) ATCCTTACTGTTCCTCTAATGTGCGTAGAATTTTATTTAATTCTTAAGGCAGCTGGAGCGACCACAAAGTTAATGTGGAGAATGATTATGTTATCCGTTGTAATGCTTGTTGCAGGATATCTTGGTGAAGCTGTCTACACAACTGGTGTAGGGCCAGCTGCGTGGGGATTAGTTTCTGGTATAGCTTACTTTGTTATAGTATATGATATATGGTTGGGAGAAGCTAAGAAATTAGCTACCTCTGCCGGTGGAGCTACTTTATCAGCACATAATATGCTATGTAAATTTGTATTAATT ILTVPLMCVEFYLILKAAGATTKLMWRMIMLSVVMLVAGYLGEAVYTTGVGPAAWGLVSGIAYFVIVYDIWLGEAKKLATSAGGATLSAHNMLCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCTTACTGTTCCTCTAATGTGCGTAGAATTTTATTTAATTCTTAAGGCA---------GCT------GGAGCGACCACA---AAGTTA------------------------------------ATGTGGAGA---ATGATTATGTTATCCGTTGTAATGCTTGTTGCAGGATATCTTGGTGAA---------GCT------------------GTC------TACACA------------------------------------------------------ACT---------GGT---------------------------GTAGGGCCA------------------GCTGCGTGG---GGATTAGTTTCTGGTATAGCTTACTTTGTTATAGTATATGATATA---------------TGG------TTG---GGAGAAGCTAAGAAATTAGCTACCTCT------GCC---GGTGGAGCT---ACT---TTA---TCA---GCA---CAT---AAT---ATGCTA---TGTAAATTTGTATTAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATT-KL------------MWR-MIMLSVVMLVAGYLGE---A------V--YT------------------T---G---------VGP------AAW-GLVSGIAYFVIVYDI-----W--L-GEAKKLATS--A-GGA-T-L-S-A-H-N-ML-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929018 [II-CFB-MS024] PRGD_OTU068_46c4191932cc89d69b3e40f8b9853ac7 gb|KJ929018| PRGD_OTU068_46c4191932cc89d69b3e40f8b9853ac7, putative proteorhodopsin gene, partial cds. PRGD_OTU068_46c4191932cc89d69b3e40f8b9853ac7, putative proteorhodopsin gene, partial cds. KJ929018 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATCCTTACTGTTCCTCTAATGTGCGTAGAATTTTATTTAATTCTTAAGGCAGCTGGAGCGACTACAAAATTAATGTGGAGAATGATTATGTTATCCGTTGTAATGCTTGTTGCAGGATATCTCGGTGAAGCTGTCTATACAACAGGTGTAGGGCCAGCTGCGTGGGGATTAGTTTCTGGTATAGCTTACTTTGTTATAGTATATGATATATGGATGGGAGAAGCTAAGAAATTAGCTACTTCTGCCGGTGGAGCTACGTTATCAGCACACAACATGCTATGTAAATTTGTATTAATT ILTVPLMCVEFYLILKAAGATTKLMWRMIMLSVVMLVAGYLGEAVYTTGVGPAAWGLVSGIAYFVIVYDIWMGEAKKLATSAGGATLSAHNMLCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCTTACTGTTCCTCTAATGTGCGTAGAATTTTATTTAATTCTTAAGGCA---------GCT------GGAGCGACTACA---AAATTA------------------------------------ATGTGGAGA---ATGATTATGTTATCCGTTGTAATGCTTGTTGCAGGATATCTCGGTGAA---------GCT------------------GTC------TATACA------------------------------------------------------ACA---------GGT---------------------------GTAGGGCCA------------------GCTGCGTGG---GGATTAGTTTCTGGTATAGCTTACTTTGTTATAGTATATGATATA---------------TGG------ATG---GGAGAAGCTAAGAAATTAGCTACTTCT------GCC---GGTGGAGCT---ACG---TTA---TCA---GCA---CAC---AAC---ATGCTA---TGTAAATTTGTATTAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATT-KL------------MWR-MIMLSVVMLVAGYLGE---A------V--YT------------------T---G---------VGP------AAW-GLVSGIAYFVIVYDI-----W--M-GEAKKLATS--A-GGA-T-L-S-A-H-N-ML-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929020 [II-CFB-MS024] PRGD_OTU068_7deec4aaf008dfa8d2dd8acfe337341d gb|KJ929020| PRGD_OTU068_7deec4aaf008dfa8d2dd8acfe337341d, putative proteorhodopsin gene, partial cds. PRGD_OTU068_7deec4aaf008dfa8d2dd8acfe337341d, putative proteorhodopsin gene, partial cds. KJ929020 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTCTAACAGTTCCTCTTATGTGTGTAGAATTTTATTTAATTCTAAAAGCAGCTGGGGCGACTACAAAATTAATGTGGAGAATGATTATGTTATCAGTTGTAATGTTAGTTGCTGGATATCTTGGTGAAGCAGTTTACACAACAGGTGTAGGTCCTGCTGCGTGGGGACTAGTATCTGGTATCGCTTACTTCGTCATTGTATATGACATATGGATGGGTGAAGCTAAGAAACTAGCAACATCAGCTGGTGGTGCTACTTTATCAGCACATAACATGTTATGTAAATTTGTTTTAATT ILTVPLMCVEFYLILKAAGATTKLMWRMIMLSVVMLVAGYLGEAVYTTGVGPAAWGLVSGIAYFVIVYDIWMGEAKKLATSAGGATLSAHNMLCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTAACAGTTCCTCTTATGTGTGTAGAATTTTATTTAATTCTAAAAGCA---------GCT------GGGGCGACTACA---AAATTA------------------------------------ATGTGGAGA---ATGATTATGTTATCAGTTGTAATGTTAGTTGCTGGATATCTTGGTGAA---------GCA------------------GTT------TACACA------------------------------------------------------ACA---------GGT---------------------------GTAGGTCCT------------------GCTGCGTGG---GGACTAGTATCTGGTATCGCTTACTTCGTCATTGTATATGACATA---------------TGG------ATG---GGTGAAGCTAAGAAACTAGCAACATCA------GCT---GGTGGTGCT---ACT---TTA---TCA---GCA---CAT---AAC---ATGTTA---TGTAAATTTGTTTTAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATT-KL------------MWR-MIMLSVVMLVAGYLGE---A------V--YT------------------T---G---------VGP------AAW-GLVSGIAYFVIVYDI-----W--M-GEAKKLATS--A-GGA-T-L-S-A-H-N-ML-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929015 [II-CFB-MS024] PRGD_OTU068_0e4f0a46380611e32cde165b7daa6ccb gb|KJ929015| PRGD_OTU068_0e4f0a46380611e32cde165b7daa6ccb, putative proteorhodopsin gene, partial cds. PRGD_OTU068_0e4f0a46380611e32cde165b7daa6ccb, putative proteorhodopsin gene, partial cds. KJ929015 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTCTTACTGTTCCTCTAATGTGTGTAGAGTTTTATTTAATTCTAAAGGCAGCTGGAGCAACTACTAAACTAATGTGGAGAATGATTATGTTGTCAGTTGTTATGTTAGTTGCTGGATATTTAGGAGAAGCGGTATATACTACTGGCGTAGGACCTGCTGCTTGGGGATTAATCTCTGGTATAGCATATTTTGTAATTGTATATGATATATGGATGGGAGAAGCTAAAAAATTAGCTACATCAGCTGGTGGTGCTACTTTATCTGCTCACAACATGTTATGCAAATTTGTATTAATC ILTVPLMCVEFYLILKAAGATTKLMWRMIMLSVVMLVAGYLGEAVYTTGVGPAAWGLISGIAYFVIVYDIWMGEAKKLATSAGGATLSAHNMLCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTACTGTTCCTCTAATGTGTGTAGAGTTTTATTTAATTCTAAAGGCA---------GCT------GGAGCAACTACT---AAACTA------------------------------------ATGTGGAGA---ATGATTATGTTGTCAGTTGTTATGTTAGTTGCTGGATATTTAGGAGAA---------GCG------------------GTA------TATACT------------------------------------------------------ACT---------GGC---------------------------GTAGGACCT------------------GCTGCTTGG---GGATTAATCTCTGGTATAGCATATTTTGTAATTGTATATGATATA---------------TGG------ATG---GGAGAAGCTAAAAAATTAGCTACATCA------GCT---GGTGGTGCT---ACT---TTA---TCT---GCT---CAC---AAC---ATGTTA---TGCAAATTTGTATTAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATT-KL------------MWR-MIMLSVVMLVAGYLGE---A------V--YT------------------T---G---------VGP------AAW-GLISGIAYFVIVYDI-----W--M-GEAKKLATS--A-GGA-T-L-S-A-H-N-ML-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929021 [II-CFB-MS024] PRGD_OTU068_80446450ab1b2e1e764804f348c1b77e gb|KJ929021| PRGD_OTU068_80446450ab1b2e1e764804f348c1b77e, putative proteorhodopsin gene, partial cds. PRGD_OTU068_80446450ab1b2e1e764804f348c1b77e, putative proteorhodopsin gene, partial cds. KJ929021 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-14.48, 113.45) ATTCTTACTGTTCCTTTAATGTGTGTAGAATTTTATTTAATTCTAAAGGCAGCTGGAGCAACTACTAAATTAATGTGGAGAATGATTATGTTGTCAGTTGTTATGTTAGTTGCTGGATATTTAGGTGAAGCGGTATATACTACTGGTGTAGGACCTGCTGCTTGGGGATTAATCTCTGGTATAGCATATTTTGTAATAGTATATGATATATGGATGGGAGAAGCCAAAAAGTTAGCTACATCAGCTGGTGGTGCTACTTTGTCTGCTCACAACATGTTATGCAAATTTGTATTAATC ILTVPLMCVEFYLILKAAGATTKLMWRMIMLSVVMLVAGYLGEAVYTTGVGPAAWGLISGIAYFVIVYDIWMGEAKKLATSAGGATLSAHNMLCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTACTGTTCCTTTAATGTGTGTAGAATTTTATTTAATTCTAAAGGCA---------GCT------GGAGCAACTACT---AAATTA------------------------------------ATGTGGAGA---ATGATTATGTTGTCAGTTGTTATGTTAGTTGCTGGATATTTAGGTGAA---------GCG------------------GTA------TATACT------------------------------------------------------ACT---------GGT---------------------------GTAGGACCT------------------GCTGCTTGG---GGATTAATCTCTGGTATAGCATATTTTGTAATAGTATATGATATA---------------TGG------ATG---GGAGAAGCCAAAAAGTTAGCTACATCA------GCT---GGTGGTGCT---ACT---TTG---TCT---GCT---CAC---AAC---ATGTTA---TGCAAATTTGTATTAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATT-KL------------MWR-MIMLSVVMLVAGYLGE---A------V--YT------------------T---G---------VGP------AAW-GLISGIAYFVIVYDI-----W--M-GEAKKLATS--A-GGA-T-L-S-A-H-N-ML-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929013 [II-CFB-MS024] PRGD_OTU068_083de38770336616ffd288f62c342b63 gb|KJ929013| PRGD_OTU068_083de38770336616ffd288f62c342b63, putative proteorhodopsin gene, partial cds. PRGD_OTU068_083de38770336616ffd288f62c342b63, putative proteorhodopsin gene, partial cds. KJ929013 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) ATATTAACAGTTCCTCTTATGTGTGTTGAGTTTTACCTTATACTCAAACCTGCAGGAGCTTCTACTAAAATGATGTGGAGATTAATTCTTCTTTCAACAATTATGTTAGTTGGCGGATATTTAGGTGAAGCTGTATATACCACTGGTGTTGGACCTGCTGCCTGGGGATTAGTTTCAGGTATTGCATATTTTGTAATTGTATATGATATTTGGATGGGAGAAGCTAAGAAATTAGCAACTTCTGCAGGAGGTGCAACTTTATCAGCTCACAATATGCTTGCTAAGTTTGTACTGATT ILTVPLMCVEFYLILKPAGASTKMMWRLILLSTIMLVGGYLGEAVYTTGVGPAAWGLVSGIAYFVIVYDIWMGEAKKLATSAGGATLSAHNMLAKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTAACAGTTCCTCTTATGTGTGTTGAGTTTTACCTTATACTCAAACCT---------GCA------GGAGCTTCTACT---AAAATG------------------------------------ATGTGGAGA---TTAATTCTTCTTTCAACAATTATGTTAGTTGGCGGATATTTAGGTGAA---------GCT------------------GTA------TATACC------------------------------------------------------------------------------------------------ACTGGTGTT------------GGACCTGCTGCCTGG---GGATTAGTTTCAGGTATTGCATATTTTGTAATTGTATATGATATT---------------TGG------ATG---GGAGAAGCTAAGAAATTAGCAACTTCT------GCA---GGAGGTGCA---ACT---TTA---TCA---GCT---CAC---AAT---ATGCTT---GCTAAGTTTGTACTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKP---A--GAST-KM------------MWR-LILLSTIMLVGGYLGE---A------V--YT--------------------------------TGV----GPAAW-GLVSGIAYFVIVYDI-----W--M-GEAKKLATS--A-GGA-T-L-S-A-H-N-ML-AKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929024 [II-CFB-MS024] PRGD_OTU068_e1c79949e21b0f3561c9b2026d9db4f4 gb|KJ929024| PRGD_OTU068_e1c79949e21b0f3561c9b2026d9db4f4, putative proteorhodopsin gene, partial cds. PRGD_OTU068_e1c79949e21b0f3561c9b2026d9db4f4, putative proteorhodopsin gene, partial cds. KJ929024 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATATTAACGGTTCCTCTTATGTGTGTTGAGTTTTACCTTATACTCAAACCTGCAGGAGCTTCTACTAAAATGATGTGGAGATTAATTCTTCTTTCAACAATTATGTTAGTTGGCGGATATTTAGGTGAAGCTGTATACACCACTGGTGTTGGACCTGCTGCCTGGGGATTAGTTTCAGGTATTGCATATTTTGTAATTGTTTACGATATTTGGATGGGAGAAGCTAAGAAATTAGCAACTTCTGCAGGAGGTGCAACTTTATCAGCTCATAACATGCTTGCTAAATTTGTACTGATT ILTVPLMCVEFYLILKPAGASTKMMWRLILLSTIMLVGGYLGEAVYTTGVGPAAWGLVSGIAYFVIVYDIWMGEAKKLATSAGGATLSAHNMLAKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTAACGGTTCCTCTTATGTGTGTTGAGTTTTACCTTATACTCAAACCT---------GCA------GGAGCTTCTACT---AAAATG------------------------------------ATGTGGAGA---TTAATTCTTCTTTCAACAATTATGTTAGTTGGCGGATATTTAGGTGAA---------GCT------------------GTA------TACACC------------------------------------------------------------------------------------------------ACTGGTGTT------------GGACCTGCTGCCTGG---GGATTAGTTTCAGGTATTGCATATTTTGTAATTGTTTACGATATT---------------TGG------ATG---GGAGAAGCTAAGAAATTAGCAACTTCT------GCA---GGAGGTGCA---ACT---TTA---TCA---GCT---CAT---AAC---ATGCTT---GCTAAATTTGTACTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKP---A--GAST-KM------------MWR-LILLSTIMLVGGYLGE---A------V--YT--------------------------------TGV----GPAAW-GLVSGIAYFVIVYDI-----W--M-GEAKKLATS--A-GGA-T-L-S-A-H-N-ML-AKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929022 [II-CFB-MS024] PRGD_OTU068_90def5e64bdeaab3924e6f3bd243dc86 gb|KJ929022| PRGD_OTU068_90def5e64bdeaab3924e6f3bd243dc86, putative proteorhodopsin gene, partial cds. PRGD_OTU068_90def5e64bdeaab3924e6f3bd243dc86, putative proteorhodopsin gene, partial cds. KJ929022 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATATTAACAGTTCCTCTTATGTGTGTTGAGTTTTATCTTATACTCAAGCCTGCAGGGGCTACTACTAAAATGATGTGGAGATTAATTCTTCTTTCAACAATTATGTTAGTTGGCGGATATCTAGGTGAAGCTGTATACACCACTGGTGTTGGACCTGCTGCCTGGGGATTAGTTTCAGGTCTTGCATATTTTGTAATTGTATATGACATTTGGATGGGAGAAGCTAAGAAATTAGCAACTTCTGCAGGAGGTGCAACTTTATCAGCTCACAATATGCTTGCTAAATTTGTATTGATT ILTVPLMCVEFYLILKPAGATTKMMWRLILLSTIMLVGGYLGEAVYTTGVGPAAWGLVSGLAYFVIVYDIWMGEAKKLATSAGGATLSAHNMLAKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTAACAGTTCCTCTTATGTGTGTTGAGTTTTATCTTATACTCAAGCCT---------GCA------GGGGCTACTACT---AAAATG------------------------------------ATGTGGAGA---TTAATTCTTCTTTCAACAATTATGTTAGTTGGCGGATATCTAGGTGAA---------GCT------------------GTA------TACACC------------------------------------------------------ACT---------GGT---------------------------GTTGGACCT------------------GCTGCCTGG---GGATTAGTTTCAGGTCTTGCATATTTTGTAATTGTATATGACATT---------------TGG------ATG---GGAGAAGCTAAGAAATTAGCAACTTCT------GCA---GGAGGTGCA---ACT---TTA---TCA---GCT---CAC---AAT---ATGCTT---GCTAAATTTGTATTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKP---A--GATT-KM------------MWR-LILLSTIMLVGGYLGE---A------V--YT------------------T---G---------VGP------AAW-GLVSGLAYFVIVYDI-----W--M-GEAKKLATS--A-GGA-T-L-S-A-H-N-ML-AKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929012 [II-CFB-MS024] PRGD_OTU068_otuREP_abb729b8e13e0a7385ae0a396ac05036 gb|KJ929012| PRGD_OTU068_otuREP_abb729b8e13e0a7385ae0a396ac05036, putative proteorhodopsin gene, partial cds. PRGD_OTU068_otuREP_abb729b8e13e0a7385ae0a396ac05036, putative proteorhodopsin gene, partial cds. KJ929012 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATATTAACAGTTCCTCTTATGTGTGTTGAGTTTTATCTTATACTCAAGCCTGCAGGGGCTACTACTAAAATGATGTGGAGATTAATTCTTCTTTCAACAATTATGTTAGTTGGAGGATATTTAGGTGAAGCTGTATACACCACTGGTGTTGGACCTGCTGCCTGGGGATTAGTTTCAGGTCTTGCATATTTTGTAATTGTATATGACATTTGGATGGGAGAAGCTAAGAAATTAGCAACTTCTGCAGGAGGTGCAACTTTATCAGCTCATAACATGCTTGCTAAATTTGTACTAATC ILTVPLMCVEFYLILKPAGATTKMMWRLILLSTIMLVGGYLGEAVYTTGVGPAAWGLVSGLAYFVIVYDIWMGEAKKLATSAGGATLSAHNMLAKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTAACAGTTCCTCTTATGTGTGTTGAGTTTTATCTTATACTCAAGCCT---------GCA------GGGGCTACTACT---AAAATG------------------------------------ATGTGGAGA---TTAATTCTTCTTTCAACAATTATGTTAGTTGGAGGATATTTAGGTGAA---------GCT------------------GTA------TACACC------------------------------------------------------ACT---------GGT---------------------------GTTGGACCT------------------GCTGCCTGG---GGATTAGTTTCAGGTCTTGCATATTTTGTAATTGTATATGACATT---------------TGG------ATG---GGAGAAGCTAAGAAATTAGCAACTTCT------GCA---GGAGGTGCA---ACT---TTA---TCA---GCT---CAT---AAC---ATGCTT---GCTAAATTTGTACTAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKP---A--GATT-KM------------MWR-LILLSTIMLVGGYLGE---A------V--YT------------------T---G---------VGP------AAW-GLVSGLAYFVIVYDI-----W--M-GEAKKLATS--A-GGA-T-L-S-A-H-N-ML-AKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929016 [II-CFB-MS024] PRGD_OTU068_2182dc3d6ae63d2ea52312283e38da9f gb|KJ929016| PRGD_OTU068_2182dc3d6ae63d2ea52312283e38da9f, putative proteorhodopsin gene, partial cds. PRGD_OTU068_2182dc3d6ae63d2ea52312283e38da9f, putative proteorhodopsin gene, partial cds. KJ929016 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-35.05, 23.73; -14.48, 113.45) ATATTAACTGTTCCGCTTATGTGCGTTGAGTTTTATCTTATACTCAAACCTGCAGGGGCTTCTACTAAAATGATGTGGAGATTAATTCTTCTTTCAACAATTATGTTAGTTGGCGGATATTTAGGTGAAGCTGTATACACAACTGGTGTTGGACCTGCTGCCTGGGGATTAGTTTCAGGTATTGCATATTTTGTAATTGTATATGATATTTGGATGGGAGAAGCTAAGAAATTAGCAACTTCTGCAGGAGGTGCAACTTTATCAGCTCATAACATGCTTGCTAAGTTTGTTCTAATT ILTVPLMCVEFYLILKPAGASTKMMWRLILLSTIMLVGGYLGEAVYTTGVGPAAWGLVSGIAYFVIVYDIWMGEAKKLATSAGGATLSAHNMLAKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTAACTGTTCCGCTTATGTGCGTTGAGTTTTATCTTATACTCAAACCT---------GCA------GGGGCTTCTACT---AAAATG------------------------------------ATGTGGAGA---TTAATTCTTCTTTCAACAATTATGTTAGTTGGCGGATATTTAGGTGAA---------GCT------------------GTA------TACACA------------------------------------------------------------------------------------------------ACTGGTGTT------------GGACCTGCTGCCTGG---GGATTAGTTTCAGGTATTGCATATTTTGTAATTGTATATGATATT---------------TGG------ATG---GGAGAAGCTAAGAAATTAGCAACTTCT------GCA---GGAGGTGCA---ACT---TTA---TCA---GCT---CAT---AAC---ATGCTT---GCTAAGTTTGTTCTAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKP---A--GAST-KM------------MWR-LILLSTIMLVGGYLGE---A------V--YT--------------------------------TGV----GPAAW-GLVSGIAYFVIVYDI-----W--M-GEAKKLATS--A-GGA-T-L-S-A-H-N-ML-AKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929689 [II-CFB-MS024] PRGD_OTU196_dd088772aeb9df7304d01c4d83da84e7 gb|KJ929689| PRGD_OTU196_dd088772aeb9df7304d01c4d83da84e7, putative proteorhodopsin gene, partial cds. PRGD_OTU196_dd088772aeb9df7304d01c4d83da84e7, putative proteorhodopsin gene, partial cds. KJ929689 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTTTAACAGTACCATTAATGTGTGTTGAATTCTACTTAATTCTTAGAGCCGCCGGTGCAACAAGAAAATTGATGTGGCGCATGATTGGCCTTTCAGTTGTCATGTTGGTTACTGGATATTTAGGAGAAGCAGTATACACTTCAGGAGCACAACCTGCTATCTGGGGATTAATTTCTGGTCTTGCTTACTTTGCAATCGTATATGATATTGCAGCAGGAGAAGCAAAGAAATTAGCTGTTGCTTCAGGAGGAGCCGTAGAAGCTGCTCACAATACACTTGTTAAGTTTGTTGTGATC ILTVPLMCVEFYLILRAAGATRKLMWRMIGLSVVMLVTGYLGEAVYTSGAQPAIWGLISGLAYFAIVYDIAAGEAKKLAVASGGAVEAAHNTLVKFVVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACAGTACCATTAATGTGTGTTGAATTCTACTTAATTCTTAGAGCC---------GCC------GGTGCAACAAGA---AAATTG------------------------------------ATGTGGCGC---ATGATTGGCCTTTCAGTTGTCATGTTGGTTACTGGATATTTAGGAGAA---------GCA------------------GTA------TACACT------------------------------------------------------TCA---------GGA---------------------------GCACAACCT------------------GCTATCTGG---GGATTAATTTCTGGTCTTGCTTACTTTGCAATCGTATATGATATT---------------GCA------GCA---GGAGAAGCAAAGAAATTAGCTGTTGCT------TCA---GGAGGAGCC---GTA---GAA---GCT---GCT---CAC---AAT---ACACTT---GTTAAGTTTGTTGTGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILRA---A--GATR-KL------------MWR-MIGLSVVMLVTGYLGE---A------V--YT------------------S---G---------AQP------AIW-GLISGLAYFAIVYDI-----A--A-GEAKKLAVA--S-GGA-V-E-A-A-H-N-TL-VKFVVI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929688 [II-CFB-MS024] PRGD_OTU196_otuREP_4a1b40b48dc4b29ec5d86eef91be84d7 gb|KJ929688| PRGD_OTU196_otuREP_4a1b40b48dc4b29ec5d86eef91be84d7, putative proteorhodopsin gene, partial cds. PRGD_OTU196_otuREP_4a1b40b48dc4b29ec5d86eef91be84d7, putative proteorhodopsin gene, partial cds. KJ929688 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) ATTTTAACAGTGCCATTAATGTGTGTTGAATTTTACTTAATCTTAAAAGCAGCCGGAGCAACAAAAAAATTGATGTGGCGTATGATTGGCCTTTCAGTTATTATGTTGGTTACAGGTTACCTAGGAGAAGCCGTTTACACAGACGGTGCAGGACCTGCAATCTGGGGTCTATTTTCTGGTTTAGCTTATTTCGTTATCGTTTATGATATCGCAATGGGTGAAGCTAAGAAACTAGCGGTAGCTTCTGGTGGAGCTGTTGAAGCTGCTCACAACACACTTGTAAAATTCGTTATCATC ILTVPLMCVEFYLILKAAGATKKLMWRMIGLSVIMLVTGYLGEAVYTDGAGPAIWGLFSGLAYFVIVYDIAMGEAKKLAVASGGAVEAAHNTLVKFVII ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACAGTGCCATTAATGTGTGTTGAATTTTACTTAATCTTAAAAGCA---------GCC------GGAGCAACAAAA---AAATTG------------------------------------ATGTGGCGT---ATGATTGGCCTTTCAGTTATTATGTTGGTTACAGGTTACCTAGGAGAA---------GCC------------------GTT------TACACA------------------------------------------------------GAC---------GGT---------------------------GCAGGACCT------------------GCAATCTGG---GGTCTATTTTCTGGTTTAGCTTATTTCGTTATCGTTTATGATATC---------------GCA------ATG---GGTGAAGCTAAGAAACTAGCGGTAGCT------TCT---GGTGGAGCT---GTT---GAA---GCT---GCT---CAC---AAC---ACACTT---GTAAAATTCGTTATCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATK-KL------------MWR-MIGLSVIMLVTGYLGE---A------V--YT------------------D---G---------AGP------AIW-GLFSGLAYFVIVYDI-----A--M-GEAKKLAVA--S-GGA-V-E-A-A-H-N-TL-VKFVII-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929310 [II-CFB-MS024] PRGD_OTU102_d20860fc2589daf1c79e6029c02417e7 gb|KJ929310| PRGD_OTU102_d20860fc2589daf1c79e6029c02417e7, putative proteorhodopsin gene, partial cds. PRGD_OTU102_d20860fc2589daf1c79e6029c02417e7, putative proteorhodopsin gene, partial cds. KJ929310 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Bering strait marine 67.49 -168.12 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185; 67.49, -168.12) GTATTGACTGTTCCATTAATGTGTGTTGAATTTTATTTAATTCTAAAAGCTGCAGGAGCTACAAAACAATTGATGTGGAAACTAATTTTCCTTTCTGTTGTTATGTTAGTTACAGGTTACTTAGGAGAAGCAGTTTACAATACTGGATCAGGACCTGCTCTTTGGGGACTTGCATCAGGTATAGCTTACTTTGTTATAGTGTATGAAATCTGGTTTGGTGGAGCTGCAAAATTAGCTCAAGCTGCCGGTGGTGCAGTAGAATCAGCTCACAAAACACTTTGTAAGTTCGTTTTAATC VLTVPLMCVEFYLILKAAGATKQLMWKLIFLSVVMLVTGYLGEAVYNTGSGPALWGLASGIAYFVIVYEIWFGGAAKLAQAAGGAVESAHKTLCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTGACTGTTCCATTAATGTGTGTTGAATTTTATTTAATTCTAAAAGCT---------GCA------GGAGCTACAAAA---CAATTG------------------------------------ATGTGGAAA---CTAATTTTCCTTTCTGTTGTTATGTTAGTTACAGGTTACTTAGGAGAA---------GCA------------------GTT------TACAAT------------------------------------------------------ACT---------GGA---------------------------TCAGGACCT------------------GCTCTTTGG---GGACTTGCATCAGGTATAGCTTACTTTGTTATAGTGTATGAAATC---------------TGG------TTT---GGTGGAGCTGCAAAATTAGCTCAAGCT------GCC---GGTGGTGCA---GTA---GAA---TCA---GCT---CAC---AAA---ACACTT---TGTAAGTTCGTTTTAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKA---A--GATK-QL------------MWK-LIFLSVVMLVTGYLGE---A------V--YN------------------T---G---------SGP------ALW-GLASGIAYFVIVYEI-----W--F-GGAAKLAQA--A-GGA-V-E-S-A-H-K-TL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929312 [II-CFB-MS024] PRGD_OTU102_f62447e130c70d2871513a3ebb59355d gb|KJ929312| PRGD_OTU102_f62447e130c70d2871513a3ebb59355d, putative proteorhodopsin gene, partial cds. PRGD_OTU102_f62447e130c70d2871513a3ebb59355d, putative proteorhodopsin gene, partial cds. KJ929312 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) GTATTGACTGTTCCATTGATGTGTGTTGAATTTTATTTAATACTTAAAGCTGCAGGGGCAACAAAACAATTGATGTGGAAATTAATCTTCCTTTCTGTTGTTATGTTAGTTACTGGTTATTTAGGAGAAGCAGTATACAATACTGGTTCTGGACCTGCTCTTTGGGGACTTGCATCAGGTATAGCATACTTCGTTATAGTGTATGAAATCTGGATGGGTGGAGCTGCAAAACTAGCTCAATCTGCTGGTGGTGCAGTCGAGTCGGCTCACAAAACACTATGCAAGTTTGTATTAATC VLTVPLMCVEFYLILKAAGATKQLMWKLIFLSVVMLVTGYLGEAVYNTGSGPALWGLASGIAYFVIVYEIWMGGAAKLAQSAGGAVESAHKTLCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTGACTGTTCCATTGATGTGTGTTGAATTTTATTTAATACTTAAAGCT---------GCA------GGGGCAACAAAA---CAATTG------------------------------------ATGTGGAAA---TTAATCTTCCTTTCTGTTGTTATGTTAGTTACTGGTTATTTAGGAGAA---------GCA------------------GTA------TACAAT------------------------------------------------------ACT---------GGT---------------------------TCTGGACCT------------------GCTCTTTGG---GGACTTGCATCAGGTATAGCATACTTCGTTATAGTGTATGAAATC---------------TGG------ATG---GGTGGAGCTGCAAAACTAGCTCAATCT------GCT---GGTGGTGCA---GTC---GAG---TCG---GCT---CAC---AAA---ACACTA---TGCAAGTTTGTATTAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKA---A--GATK-QL------------MWK-LIFLSVVMLVTGYLGE---A------V--YN------------------T---G---------SGP------ALW-GLASGIAYFVIVYEI-----W--M-GGAAKLAQS--A-GGA-V-E-S-A-H-K-TL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929352 [II-CFB-MS024] PRGD_OTU109_4b8196ae6c5b449469267e94f3a750c6 gb|KJ929352| PRGD_OTU109_4b8196ae6c5b449469267e94f3a750c6, putative proteorhodopsin gene, partial cds. PRGD_OTU109_4b8196ae6c5b449469267e94f3a750c6, putative proteorhodopsin gene, partial cds. KJ929352 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175) GTATTAACAGTGCCGTTAATGTGCGTTGAGTTCTATCTAATTTTAAGGGCTGCAGGTGCAACAAAAAGCCTAATGTGGAAAATGATATTCCTATCGGTTGTTATGCTTGTAACAGGTTATTTAGGAGAAGCTGTTTACAATACAGGTATGGGACCAGCTGTATGGGGAGCACTCTCTGGTGCAGCATATTTCGCTATAGTTTGGGAAATATGGAAAGGTGGAGCTGCTCAGTTAGCGCAAGCTGCTGGTGGCGCAGTTCAATCAGCTCACAATACATTACTCAAGTTTGTAGTCATA VLTVPLMCVEFYLILRAAGATKSLMWKMIFLSVVMLVTGYLGEAVYNTGMGPAVWGALSGAAYFAIVWEIWKGGAAQLAQAAGGAVQSAHNTLLKFVVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAACAGTGCCGTTAATGTGCGTTGAGTTCTATCTAATTTTAAGGGCT---------GCA------GGTGCAACAAAA---AGCCTA------------------------------------ATGTGGAAA---ATGATATTCCTATCGGTTGTTATGCTTGTAACAGGTTATTTAGGAGAA---------GCT------------------GTT------TACAAT------------------------------------------------------ACA---------GGT---------------------------ATGGGACCA------------------GCTGTATGG---GGAGCACTCTCTGGTGCAGCATATTTCGCTATAGTTTGGGAAATA---------------TGG------AAA---GGTGGAGCTGCTCAGTTAGCGCAAGCT------GCT---GGTGGCGCA---GTT---CAA---TCA---GCT---CAC---AAT---ACATTA---CTCAAGTTTGTAGTCATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILRA---A--GATK-SL------------MWK-MIFLSVVMLVTGYLGE---A------V--YN------------------T---G---------MGP------AVW-GALSGAAYFAIVWEI-----W--K-GGAAQLAQA--A-GGA-V-Q-S-A-H-N-TL-LKFVVI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929354 [II-CFB-MS024] PRGD_OTU109_66f11edec211c1cb361a53c6a2ea4c1d gb|KJ929354| PRGD_OTU109_66f11edec211c1cb361a53c6a2ea4c1d, putative proteorhodopsin gene, partial cds. PRGD_OTU109_66f11edec211c1cb361a53c6a2ea4c1d, putative proteorhodopsin gene, partial cds. KJ929354 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185) GTATTAACAGTGCCGTTAATGTGCGTTGAGTTCTATCTAATTTTAAGAGCTGCAGGTGCAACAAAAAGCCTAATGTGGAAAATGATATTCCTATCGGTTGTTATGCTTGTAACAGGTTATCTAGGAGAAGCTGTTTACAATACAGGTATGGGACCAGCTGTATGGGGAGCATTCTCTGGTGCAGCATATTTCGCTATAGTTTGGGAAATATGGAAAGGTGGAGCTGCTCAGTTAGCACAAGCTGCTGGTGGCGCAGTTCAATCAGCTCACAATACATTACTCAAGTTTGTAGTCATA VLTVPLMCVEFYLILRAAGATKSLMWKMIFLSVVMLVTGYLGEAVYNTGMGPAVWGAFSGAAYFAIVWEIWKGGAAQLAQAAGGAVQSAHNTLLKFVVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAACAGTGCCGTTAATGTGCGTTGAGTTCTATCTAATTTTAAGAGCT---------GCA------GGTGCAACAAAA---AGCCTA------------------------------------ATGTGGAAA---ATGATATTCCTATCGGTTGTTATGCTTGTAACAGGTTATCTAGGAGAA---------GCT------------------GTT------TACAAT------------------------------------------------------ACA---------GGT---------------------------ATGGGACCA------------------GCTGTATGG---GGAGCATTCTCTGGTGCAGCATATTTCGCTATAGTTTGGGAAATA---------------TGG------AAA---GGTGGAGCTGCTCAGTTAGCACAAGCT------GCT---GGTGGCGCA---GTT---CAA---TCA---GCT---CAC---AAT---ACATTA---CTCAAGTTTGTAGTCATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILRA---A--GATK-SL------------MWK-MIFLSVVMLVTGYLGE---A------V--YN------------------T---G---------MGP------AVW-GAFSGAAYFAIVWEI-----W--K-GGAAQLAQA--A-GGA-V-Q-S-A-H-N-TL-LKFVVI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929351 [II-CFB-MS024] PRGD_OTU109_1f16c3034a7793b608e926bcfaa1ff95 gb|KJ929351| PRGD_OTU109_1f16c3034a7793b608e926bcfaa1ff95, putative proteorhodopsin gene, partial cds. PRGD_OTU109_1f16c3034a7793b608e926bcfaa1ff95, putative proteorhodopsin gene, partial cds. KJ929351 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781), English Channel (48.7717, -3.9683) GTATTAACAGTGCCGTTAATGTGCGTTGAGTTCTATCTAATTTTAAGAGCTGCAGGTGCAACTAAAAGCCTAATGTGGAAAATGATATTCCTATCGGTTGTTATGCTTGTAACAGGTTACCTAGGAGAAGCTGTTTACAATACAGGCATGGGACCAGCTGTATGGGGAGCACTCTCTGGTGCAGCATATTTCGCTATAGTTTGGGAAATATGGAAAGGTGGAGCTGCTCAGTTAGCGCAAGCTGCTGGTGGCGCAGTTCAATCAGCTCACAATACGTTACTCAAGTTTGTAGTCATA VLTVPLMCVEFYLILRAAGATKSLMWKMIFLSVVMLVTGYLGEAVYNTGMGPAVWGALSGAAYFAIVWEIWKGGAAQLAQAAGGAVQSAHNTLLKFVVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAACAGTGCCGTTAATGTGCGTTGAGTTCTATCTAATTTTAAGAGCT---------GCA------GGTGCAACTAAA---AGCCTA------------------------------------ATGTGGAAA---ATGATATTCCTATCGGTTGTTATGCTTGTAACAGGTTACCTAGGAGAA---------GCT------------------GTT------TACAAT------------------------------------------------------ACA---------GGC---------------------------ATGGGACCA------------------GCTGTATGG---GGAGCACTCTCTGGTGCAGCATATTTCGCTATAGTTTGGGAAATA---------------TGG------AAA---GGTGGAGCTGCTCAGTTAGCGCAAGCT------GCT---GGTGGCGCA---GTT---CAA---TCA---GCT---CAC---AAT---ACGTTA---CTCAAGTTTGTAGTCATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILRA---A--GATK-SL------------MWK-MIFLSVVMLVTGYLGE---A------V--YN------------------T---G---------MGP------AVW-GALSGAAYFAIVWEI-----W--K-GGAAQLAQA--A-GGA-V-Q-S-A-H-N-TL-LKFVVI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929355 [II-CFB-MS024] PRGD_OTU109_6f1f2ecc9c6481efa239fa149d2a29e0 gb|KJ929355| PRGD_OTU109_6f1f2ecc9c6481efa239fa149d2a29e0, putative proteorhodopsin gene, partial cds. PRGD_OTU109_6f1f2ecc9c6481efa239fa149d2a29e0, putative proteorhodopsin gene, partial cds. KJ929355 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) GTATTAACAGTGCCGTTAATGTGCGTTGAGTTCTATCTAATTTTAAGAGCTGCAGGTGCAACTAAAAGCTTAATGTGGAAAATGATATTCCTATCGGTTGTTATGCTTGTAACAGGTTACTTAGGAGAAGCTGTTTACAATACAGGCATGGGGCCAGCTGTATGGGGAGCACTCTCTGGTGCAGCATATTTTGCTATAGTTTGGGAAATATGGAAAGGTGGAGCTGCTCAGTTAGCCCAAGCTGCTGGTGGCGCAGTTCAATCAGCTCACAATACATTACTAAAGTTTGTAGTCATA VLTVPLMCVEFYLILRAAGATKSLMWKMIFLSVVMLVTGYLGEAVYNTGMGPAVWGALSGAAYFAIVWEIWKGGAAQLAQAAGGAVQSAHNTLLKFVVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAACAGTGCCGTTAATGTGCGTTGAGTTCTATCTAATTTTAAGAGCT---------GCA------GGTGCAACTAAA---AGCTTA------------------------------------ATGTGGAAA---ATGATATTCCTATCGGTTGTTATGCTTGTAACAGGTTACTTAGGAGAA---------GCT------------------GTT------TACAAT------------------------------------------------------ACA---------GGC---------------------------ATGGGGCCA------------------GCTGTATGG---GGAGCACTCTCTGGTGCAGCATATTTTGCTATAGTTTGGGAAATA---------------TGG------AAA---GGTGGAGCTGCTCAGTTAGCCCAAGCT------GCT---GGTGGCGCA---GTT---CAA---TCA---GCT---CAC---AAT---ACATTA---CTAAAGTTTGTAGTCATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILRA---A--GATK-SL------------MWK-MIFLSVVMLVTGYLGE---A------V--YN------------------T---G---------MGP------AVW-GALSGAAYFAIVWEI-----W--K-GGAAQLAQA--A-GGA-V-Q-S-A-H-N-TL-LKFVVI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929309 [II-CFB-MS024] PRGD_OTU102_89186ff29a9255911910772cce95f036 gb|KJ929309| PRGD_OTU102_89186ff29a9255911910772cce95f036, putative proteorhodopsin gene, partial cds. PRGD_OTU102_89186ff29a9255911910772cce95f036, putative proteorhodopsin gene, partial cds. KJ929309 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683) GTATTAACAGTGCCGTTAATGTGCGTTGAGTTCTATCTAATTTTAAGAGCTGCAGGTGCAACTAAAAGCTTAATGTGGAAAATGATATTCCTATCGGTTGTTATGCTTGTTACAGGTTACTTAGGAGAAGCTGTCTACGATGATCCAACTGGATCGGGGCCAACAATTTGGGGTCTTGTATCAGGTATAGCTTATTTTGTAATAGTTTATGAAATATGG VLTVPLMCVEFYLILRAAGATKSLMWKMIFLSVVMLVTGYLGEAVYDDPTGSGPTIWGLVSGIAYFVIVYEIW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAACAGTGCCGTTAATGTGCGTTGAGTTCTATCTAATTTTAAGAGCT---------GCA------GGTGCAACTAAA---AGCTTA------------------------------------ATGTGGAAA---ATGATATTCCTATCGGTTGTTATGCTTGTTACAGGTTACTTAGGAGAA---------GCT------------------GTC------TACGAT---------------------------------------------GAT---CCAACT---------GGA---------------------------TCGGGGCCA------------------ACAATTTGG---GGTCTTGTATCAGGTATAGCTTATTTTGTAATAGTTTATGAAATA---------------TGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILRA---A--GATK-SL------------MWK-MIFLSVVMLVTGYLGE---A------V--YD---------------D-PT---G---------SGP------TIW-GLVSGIAYFVIVYEI-----W-------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929311 [II-CFB-MS024] PRGD_OTU102_e257e23573a0c82656b0875760a9f37d gb|KJ929311| PRGD_OTU102_e257e23573a0c82656b0875760a9f37d, putative proteorhodopsin gene, partial cds. PRGD_OTU102_e257e23573a0c82656b0875760a9f37d, putative proteorhodopsin gene, partial cds. KJ929311 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na GTATTAACAGTGCCGTTAATGTGCGTTGAGTTCTATCTAATTTTAAGAGCTGCAGGTGCAACTAAAAGCTTAATGTGGAAAATGATATTCCTATCGGTTGTTATGCTTGTTACAGGTTACTTAGGAGAAGCTGTCTACGATGATCCAACTGGATCGGGGCCAACAATTTGGGGTCTTGTATCAGGTATAGCTTATTTTGTAATAGTTTATGAAATA VLTVPLMCVEFYLILRAAGATKSLMWKMIFLSVVMLVTGYLGEAVYDDPTGSGPTIWGLVSGIAYFVIVYEI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAACAGTGCCGTTAATGTGCGTTGAGTTCTATCTAATTTTAAGAGCT---------GCA------GGTGCAACTAAA---AGCTTA------------------------------------ATGTGGAAA---ATGATATTCCTATCGGTTGTTATGCTTGTTACAGGTTACTTAGGAGAA---------GCT------------------GTC------TACGAT---------------------------------------------GAT---CCAACT---------GGA---------------------------TCGGGGCCA------------------ACAATTTGG---GGTCTTGTATCAGGTATAGCTTATTTTGTAATAGTTTATGAAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILRA---A--GATK-SL------------MWK-MIFLSVVMLVTGYLGE---A------V--YD---------------D-PT---G---------SGP------TIW-GLVSGIAYFVIVYEI-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929308 [II-CFB-MS024] PRGD_OTU102_otuREP_391d0fe651c9ac9ca20efc918fb689f6 gb|KJ929308| PRGD_OTU102_otuREP_391d0fe651c9ac9ca20efc918fb689f6, putative proteorhodopsin gene, partial cds. PRGD_OTU102_otuREP_391d0fe651c9ac9ca20efc918fb689f6, putative proteorhodopsin gene, partial cds. KJ929308 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637), Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) GTATTAACAGTGCCGTTAATGTGCGTTGAGTTCTATCTAATTTTAAGAGCTGCAGGTGCAACTAAAAGCTTAATGTGGAAAATGATATTCCTATCGGTTGTTATGCTTGTTACAGGTTACTTAGGAGAAGCTGTCTACGATGATCCAACTGGATCGGGGCCAACAATTTGGGGTCTTGTATCAGGTATAGCTTATTTTGTAATAGTTTATGAAATATGGTTGGGTGGAGCTGCAAAATTAGCTCAAGCTGCTGGTGGTGCCGTTGAAAAAGCTCACAAAACACTATGCTGGTTTGTACTCGTA VLTVPLMCVEFYLILRAAGATKSLMWKMIFLSVVMLVTGYLGEAVYDDPTGSGPTIWGLVSGIAYFVIVYEIWLGGAAKLAQAAGGAVEKAHKTLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAACAGTGCCGTTAATGTGCGTTGAGTTCTATCTAATTTTAAGAGCT---------GCA------GGTGCAACTAAA---AGCTTA------------------------------------ATGTGGAAA---ATGATATTCCTATCGGTTGTTATGCTTGTTACAGGTTACTTAGGAGAA---------GCT------------------GTC------TACGAT---------------------------------------------GAT---CCAACT---------GGA---------------------------TCGGGGCCA------------------ACAATTTGG---GGTCTTGTATCAGGTATAGCTTATTTTGTAATAGTTTATGAAATA---------------TGG------TTG---GGTGGAGCTGCAAAATTAGCTCAAGCT------GCT---GGTGGTGCC---GTT---GAA---AAA---GCT---CAC---AAA---ACACTA---TGCTGGTTTGTACTCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILRA---A--GATK-SL------------MWK-MIFLSVVMLVTGYLGE---A------V--YD---------------D-PT---G---------SGP------TIW-GLVSGIAYFVIVYEI-----W--L-GGAAKLAQA--A-GGA-V-E-K-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929313 [II-CFB-MS024] PRGD_OTU102_fc68ca095e9e203494efc45707c7de38 gb|KJ929313| PRGD_OTU102_fc68ca095e9e203494efc45707c7de38, putative proteorhodopsin gene, partial cds. PRGD_OTU102_fc68ca095e9e203494efc45707c7de38, putative proteorhodopsin gene, partial cds. KJ929313 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Bering strait marine 67.49 -168.12 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185; 67.49, -168.12) GTATTAACAGTACCGTTAATGTGCGTTGAGTTCTATCTAATTTTAAGAGCTGCAGGTGCAACTAAAAGCTTAATGTGGAAAATGATATTCCTATCGGTTGTTATGCTTGTAACAGGTTACTTAGGAGAAGCTGTCTACGATGATCCAACTGGATCGGGGCCAACAATTTGGGGTCTTGTATCAGGTATAGCTTATTTTGTAATAGTTTATGAAATATGGTTGGGTGGAGCTGCAAAATTAGCTAAAGCTGCTGGTGGTGCCGTTGAAAAAGCTCACAAAACACTATGCTGGTTTGTACTCGTA VLTVPLMCVEFYLILRAAGATKSLMWKMIFLSVVMLVTGYLGEAVYDDPTGSGPTIWGLVSGIAYFVIVYEIWLGGAAKLAKAAGGAVEKAHKTLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAACAGTACCGTTAATGTGCGTTGAGTTCTATCTAATTTTAAGAGCT---------GCA------GGTGCAACTAAA---AGCTTA------------------------------------ATGTGGAAA---ATGATATTCCTATCGGTTGTTATGCTTGTAACAGGTTACTTAGGAGAA---------GCT------------------GTC------TACGAT---------------------------------------------GAT---CCAACT---------GGA---------------------------TCGGGGCCA------------------ACAATTTGG---GGTCTTGTATCAGGTATAGCTTATTTTGTAATAGTTTATGAAATA---------------TGG------TTG---GGTGGAGCTGCAAAATTAGCTAAAGCT------GCT---GGTGGTGCC---GTT---GAA---AAA---GCT---CAC---AAA---ACACTA---TGCTGGTTTGTACTCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILRA---A--GATK-SL------------MWK-MIFLSVVMLVTGYLGE---A------V--YD---------------D-PT---G---------SGP------TIW-GLVSGIAYFVIVYEI-----W--L-GGAAKLAKA--A-GGA-V-E-K-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929350 [II-CFB-MS024] PRGD_OTU109_otuREP_2ccd671b70a938a7ea521e7a150d7800 gb|KJ929350| PRGD_OTU109_otuREP_2ccd671b70a938a7ea521e7a150d7800, putative proteorhodopsin gene, partial cds. PRGD_OTU109_otuREP_2ccd671b70a938a7ea521e7a150d7800, putative proteorhodopsin gene, partial cds. KJ929350 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Pacific side (72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (33.935, 18.508), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) ATCCTTACAGTACCATTAATGTGTGTTGAGTTTTATCTTATTCTTAGAGCTGCTGGTGCAACCAGAAGCTTGATGTGGAAAATGATTTTCTTATCTGTTATCATGCTTGTTACAGGATACCTTGGAGAAGCTGTTTACATGACTGGTATGGGACCAGCTGTATGGGGTGCAATCTCAGGTGCTGCTTATTTCGCTATAGTTTACGAAATATGGAAAGGTGGAGCTGCACAATTAGCTCAAGCTGCGGGTGGTGCAGTAGAATCTGCTCACAACACTTTAGTTAAGTTCGTTGTTATA ILTVPLMCVEFYLILRAAGATRSLMWKMIFLSVIMLVTGYLGEAVYMTGMGPAVWGAISGAAYFAIVYEIWKGGAAQLAQAAGGAVESAHNTLVKFVVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCTTACAGTACCATTAATGTGTGTTGAGTTTTATCTTATTCTTAGAGCT---------GCT------GGTGCAACCAGA---AGCTTG------------------------------------ATGTGGAAA---ATGATTTTCTTATCTGTTATCATGCTTGTTACAGGATACCTTGGAGAA---------GCT------------------GTT------TACATG------------------------------------------------------ACT---------GGT---------------------------ATGGGACCA------------------GCTGTATGG---GGTGCAATCTCAGGTGCTGCTTATTTCGCTATAGTTTACGAAATA---------------TGG------AAA---GGTGGAGCTGCACAATTAGCTCAAGCT------GCG---GGTGGTGCA---GTA---GAA---TCT---GCT---CAC---AAC---ACTTTA---GTTAAGTTCGTTGTTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILRA---A--GATR-SL------------MWK-MIFLSVIMLVTGYLGE---A------V--YM------------------T---G---------MGP------AVW-GAISGAAYFAIVYEI-----W--K-GGAAQLAQA--A-GGA-V-E-S-A-H-N-TL-VKFVVI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929353 [II-CFB-MS024] PRGD_OTU109_61ff9b68ce8b0ef930028917a7c704d9 gb|KJ929353| PRGD_OTU109_61ff9b68ce8b0ef930028917a7c704d9, putative proteorhodopsin gene, partial cds. PRGD_OTU109_61ff9b68ce8b0ef930028917a7c704d9, putative proteorhodopsin gene, partial cds. KJ929353 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175; 33.935, 18.508) ATCCTTACAGTACCATTAATGTGTGTTGAGTTTTATCTTATTCTTAGAGCTGCTGGTGCAACCAGAAGCTTAATGTGGAAAATGATATTCTTGTCTGTTATCATGCTTGTTACAGGTTACCTTGGAGAAGCTGTTTACATGACTGGTATGGGACCAGCTGTATGGGGTGCAATCTCAGGTGCTGCTTATTTCGCTATAGTTTATGAAATATGGAAAGGTGGAGCTGCACAATTAGCTCAAGCTGCGGGTGGTGCAGTAGAATCTGCTCACAACACTTTAGTTAAGTTCGTTGTTATA ILTVPLMCVEFYLILRAAGATRSLMWKMIFLSVIMLVTGYLGEAVYMTGMGPAVWGAISGAAYFAIVYEIWKGGAAQLAQAAGGAVESAHNTLVKFVVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCTTACAGTACCATTAATGTGTGTTGAGTTTTATCTTATTCTTAGAGCT---------GCT------GGTGCAACCAGA---AGCTTA------------------------------------ATGTGGAAA---ATGATATTCTTGTCTGTTATCATGCTTGTTACAGGTTACCTTGGAGAA---------GCT------------------GTT------TACATG------------------------------------------------------ACT---------GGT---------------------------ATGGGACCA------------------GCTGTATGG---GGTGCAATCTCAGGTGCTGCTTATTTCGCTATAGTTTATGAAATA---------------TGG------AAA---GGTGGAGCTGCACAATTAGCTCAAGCT------GCG---GGTGGTGCA---GTA---GAA---TCT---GCT---CAC---AAC---ACTTTA---GTTAAGTTCGTTGTTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILRA---A--GATR-SL------------MWK-MIFLSVIMLVTGYLGE---A------V--YM------------------T---G---------MGP------AVW-GAISGAAYFAIVYEI-----W--K-GGAAQLAQA--A-GGA-V-E-S-A-H-N-TL-VKFVVI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929732 [II-CFB-MS024] PRGD_OTU218_otuREP_22ab4e1086543c59005eba72de6a0b4f gb|KJ929732| PRGD_OTU218_otuREP_22ab4e1086543c59005eba72de6a0b4f, putative proteorhodopsin gene, partial cds. PRGD_OTU218_otuREP_22ab4e1086543c59005eba72de6a0b4f, putative proteorhodopsin gene, partial cds. KJ929732 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) GTGTTGACAGTACCTTTGATGTGCGTTGAGTTTTATTTAATCTTAAAAGCTGCTGGTGCAACAAAAGGATTGATGTGGAAAATGATTTTCGCTTCTGTCGTTATGCTTGTAACTGGATATTTTGGTGAAGCTGTTTACACAACTGGTGCAGGTCCTGCTGCTTGGGGAGCTCTTTCTGGTGCTGCTTACTTCTACATTTTGTATGAAGTATGGGCTGGAGGTGCTGCTAAGCTAGCTGCCGCCGCTGGTGGAGCTGTTCAAAGCGCACATCAAACACTTGTTAAGTTTGTATTTATT VLTVPLMCVEFYLILKAAGATKGLMWKMIFASVVMLVTGYFGEAVYTTGAGPAAWGALSGAAYFYILYEVWAGGAAKLAAAAGGAVQSAHQTLVKFVFI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTTGACAGTACCTTTGATGTGCGTTGAGTTTTATTTAATCTTAAAAGCT---------GCT------GGTGCAACAAAA---GGATTG------------------------------------ATGTGGAAA---ATGATTTTCGCTTCTGTCGTTATGCTTGTAACTGGATATTTTGGTGAA---------GCT------------------GTT------TACACA------------------------------------------------------ACT---------GGT---------------------------GCAGGTCCT------------------GCTGCTTGG---GGAGCTCTTTCTGGTGCTGCTTACTTCTACATTTTGTATGAAGTA---------------TGG------GCT---GGAGGTGCTGCTAAGCTAGCTGCCGCC------GCT---GGTGGAGCT---GTT---CAA---AGC---GCA---CAT---CAA---ACACTT---GTTAAGTTTGTATTTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKA---A--GATK-GL------------MWK-MIFASVVMLVTGYFGE---A------V--YT------------------T---G---------AGP------AAW-GALSGAAYFYILYEV-----W--A-GGAAKLAAA--A-GGA-V-Q-S-A-H-Q-TL-VKFVFI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929733 [II-CFB-MS024] PRGD_OTU218_c2f84a2788118d51a0de392ef372766b gb|KJ929733| PRGD_OTU218_c2f84a2788118d51a0de392ef372766b, putative proteorhodopsin gene, partial cds. PRGD_OTU218_c2f84a2788118d51a0de392ef372766b, putative proteorhodopsin gene, partial cds. KJ929733 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) GTGTTGACAGTACCTTTGATGTGCGTTGAGTTTTATTTAATCTTAAAAGCTGCTGGTGCAACAAAAGGATTGATGTGGAAAATGATTTTCGCTTCTGTCGTTATGCTTGTAACTGGATATTTTGGTGAAGCTGTTTACACAACTGGTGCAGGTCCTGCTGCTTGGGGAGCTCTTTCTGGTGCTGCTTACTTCTACATTTTGTATGAAGTATGGGCTGGAGGTGCTGCTAAGCTAGCTGCCGCTGCTGGTGGAGCTGTTCAAAGCGCACACCAAACACTTGTTAAGTTTGTATTTATA VLTVPLMCVEFYLILKAAGATKGLMWKMIFASVVMLVTGYFGEAVYTTGAGPAAWGALSGAAYFYILYEVWAGGAAKLAAAAGGAVQSAHQTLVKFVFI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTTGACAGTACCTTTGATGTGCGTTGAGTTTTATTTAATCTTAAAAGCT---------GCT------GGTGCAACAAAA---GGATTG------------------------------------ATGTGGAAA---ATGATTTTCGCTTCTGTCGTTATGCTTGTAACTGGATATTTTGGTGAA---------GCT------------------GTT------TACACA------------------------------------------------------ACT---------GGT---------------------------GCAGGTCCT------------------GCTGCTTGG---GGAGCTCTTTCTGGTGCTGCTTACTTCTACATTTTGTATGAAGTA---------------TGG------GCT---GGAGGTGCTGCTAAGCTAGCTGCCGCT------GCT---GGTGGAGCT---GTT---CAA---AGC---GCA---CAC---CAA---ACACTT---GTTAAGTTTGTATTTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKA---A--GATK-GL------------MWK-MIFASVVMLVTGYFGE---A------V--YT------------------T---G---------AGP------AAW-GALSGAAYFYILYEV-----W--A-GGAAKLAAA--A-GGA-V-Q-S-A-H-Q-TL-VKFVFI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928952 [II-CFB-MS024] PRGD_OTU063_5e3efbebd572adbf1a662767f095ebb2 gb|KJ928952| PRGD_OTU063_5e3efbebd572adbf1a662767f095ebb2, putative proteorhodopsin gene, partial cds. PRGD_OTU063_5e3efbebd572adbf1a662767f095ebb2, putative proteorhodopsin gene, partial cds. KJ928952 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) ATATTAACCGTACCACTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCAGCTGGCGCAACAAAACAGTTAATGTGGAAAATGATTTTTGCTTCTGCAGTTATGCTAGTTACTGGATACTTTGGTGAAGCAGTTTATACTACTGGATCTGGCCCTGCTGTGTGGGGATTAGTTTCTGGTATAGCATATTTTTACATTGTTTATGAAATATGGATGGGTGGCGCTTCAAAACTTGCAGCTTCTGCGGGTGGTGCGGTTCAATCTGCTCATAGAACTCTTTGCTGGTTCGTGTTAGCT ILTVPLMCVEFYLILKAAGATKQLMWKMIFASAVMLVTGYFGEAVYTTGSGPAVWGLVSGIAYFYIVYEIWMGGASKLAASAGGAVQSAHRTLCWFVLA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTAACCGTACCACTAATGTGTGTTGAATTTTACCTGATCCTAAAAGCA---------GCT------GGCGCAACAAAA---CAGTTA------------------------------------ATGTGGAAA---ATGATTTTTGCTTCTGCAGTTATGCTAGTTACTGGATACTTTGGTGAA---------GCA------------------GTT------TATACT------------------------------------------------------ACT---------GGA---------------------------TCTGGCCCT------------------GCTGTGTGG---GGATTAGTTTCTGGTATAGCATATTTTTACATTGTTTATGAAATA---------------TGG------ATG---GGTGGCGCTTCAAAACTTGCAGCTTCT------GCG---GGTGGTGCG---GTT---CAA---TCT---GCT---CAT---AGA---ACTCTT---TGCTGGTTCGTGTTAGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATK-QL------------MWK-MIFASAVMLVTGYFGE---A------V--YT------------------T---G---------SGP------AVW-GLVSGIAYFYIVYEI-----W--M-GGASKLAAS--A-GGA-V-Q-S-A-H-R-TL-CWFVLA-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928948 [II-CFB-MS024] PRGD_OTU063_3b0bdc1a369a84d7899966ba79c3d3cc gb|KJ928948| PRGD_OTU063_3b0bdc1a369a84d7899966ba79c3d3cc, putative proteorhodopsin gene, partial cds. PRGD_OTU063_3b0bdc1a369a84d7899966ba79c3d3cc, putative proteorhodopsin gene, partial cds. KJ928948 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) GTCCTTACTGTTCCTTTAATGTGTGTTGAATTCTATTTAATACTCAAAGCAGCAGGTGCAACTAAAACTTTAATGTGGAAAATGATTTTCGTATCTACTATAATGTTAGTTGCAGGCTACTTCGGTGAAGCTGTTTACACAACTGGTTCAGGTCCTGCAGTATGGGGTCTTATTTCAGGTATTGCTTATTTCTATATCGCATATGAGATATGGCTTGGAGGAGCTTCAAAACTTGCAGCAGCAGCTGGTGGAGCAGTTCAATCTGCACACAAAGCATTATGCTGGTTTGTATTAGTA VLTVPLMCVEFYLILKAAGATKTLMWKMIFVSTIMLVAGYFGEAVYTTGSGPAVWGLISGIAYFYIAYEIWLGGASKLAAAAGGAVQSAHKALCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCCTTACTGTTCCTTTAATGTGTGTTGAATTCTATTTAATACTCAAAGCA---------GCA------GGTGCAACTAAA---ACTTTA------------------------------------ATGTGGAAA---ATGATTTTCGTATCTACTATAATGTTAGTTGCAGGCTACTTCGGTGAA---------GCT------------------GTT------TACACA------------------------------------------------------ACT---------GGT---------------------------TCAGGTCCT------------------GCAGTATGG---GGTCTTATTTCAGGTATTGCTTATTTCTATATCGCATATGAGATA---------------TGG------CTT---GGAGGAGCTTCAAAACTTGCAGCAGCA------GCT---GGTGGAGCA---GTT---CAA---TCT---GCA---CAC---AAA---GCATTA---TGCTGGTTTGTATTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKA---A--GATK-TL------------MWK-MIFVSTIMLVAGYFGE---A------V--YT------------------T---G---------SGP------AVW-GLISGIAYFYIAYEI-----W--L-GGASKLAAA--A-GGA-V-Q-S-A-H-K-AL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928947 [II-CFB-MS024] PRGD_OTU063_1b831a07e9d71355eda21f59a5ffdbc6 gb|KJ928947| PRGD_OTU063_1b831a07e9d71355eda21f59a5ffdbc6, putative proteorhodopsin gene, partial cds. PRGD_OTU063_1b831a07e9d71355eda21f59a5ffdbc6, putative proteorhodopsin gene, partial cds. KJ928947 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) GTTCTTACTGTCCCTCTAATGTGTGTAGAATTTTATTTAATTCTAAAAGCAGCAGGTGCAACTAAAACACTAATGTGGAAAATGATATTCGTATCTACTATCATGTTAGTTGCTGGTTACTTCGGTGAAGCTGTTTACACTACTGGTTCAGGTCCTGCGTTATGGGGTCTTATTTCAGGTATTGCTTATTTCTATATTGCATATGAAATATGGCTTGGAGGAGCTTCAAAACTTGCAGCAGCAGCTGGTGGAGCAGTTCAATCTGCACACAAGGCGTTATGTTGGTTTGTATTAGTA VLTVPLMCVEFYLILKAAGATKTLMWKMIFVSTIMLVAGYFGEAVYTTGSGPALWGLISGIAYFYIAYEIWLGGASKLAAAAGGAVQSAHKALCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTCTTACTGTCCCTCTAATGTGTGTAGAATTTTATTTAATTCTAAAAGCA---------GCA------GGTGCAACTAAA---ACACTA------------------------------------ATGTGGAAA---ATGATATTCGTATCTACTATCATGTTAGTTGCTGGTTACTTCGGTGAA---------GCT------------------GTT------TACACT------------------------------------------------------ACT---------GGT---------------------------TCAGGTCCT------------------GCGTTATGG---GGTCTTATTTCAGGTATTGCTTATTTCTATATTGCATATGAAATA---------------TGG------CTT---GGAGGAGCTTCAAAACTTGCAGCAGCA------GCT---GGTGGAGCA---GTT---CAA---TCT---GCA---CAC---AAG---GCGTTA---TGTTGGTTTGTATTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKA---A--GATK-TL------------MWK-MIFVSTIMLVAGYFGE---A------V--YT------------------T---G---------SGP------ALW-GLISGIAYFYIAYEI-----W--L-GGASKLAAA--A-GGA-V-Q-S-A-H-K-AL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928957 [II-CFB-MS024] PRGD_OTU063_d7a1691c36d2f29a1b99446055c6fce7 gb|KJ928957| PRGD_OTU063_d7a1691c36d2f29a1b99446055c6fce7, putative proteorhodopsin gene, partial cds. PRGD_OTU063_d7a1691c36d2f29a1b99446055c6fce7, putative proteorhodopsin gene, partial cds. KJ928957 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.935 18.508 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937), Mediterranean Sea (33.935, 18.508) GTCCTAACTGTTCCTCTGATGTGTGTTGAATTTTATTTAATACTAAAAGCAGCAGGTGCAACTAAACAATTGATGTGGAAAATGATTTTTGCGTCCACCATCATGTTGGTTTTCGGTTACTTCGGCGAAGCTGTTTACACTACAGGCTCAGGTCCTGCAGTTTTTGGTCTTATTTCAGGTATTGCTTATTTCTATGTTGTATATGAAATATGGCTTGGAGGTGCTTCAAAACTTGCAGCATCAGCTGGAGGCGCAGTGCAAGCTGCACACAAATCATTATGTTGGTTTGTATTAGTT VLTVPLMCVEFYLILKAAGATKQLMWKMIFASTIMLVFGYFGEAVYTTGSGPAVFGLISGIAYFYVVYEIWLGGASKLAASAGGAVQAAHKSLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCCTAACTGTTCCTCTGATGTGTGTTGAATTTTATTTAATACTAAAAGCA---------GCA------GGTGCAACTAAA---CAATTG------------------------------------ATGTGGAAA---ATGATTTTTGCGTCCACCATCATGTTGGTTTTCGGTTACTTCGGCGAA---------GCT------------------GTT------TACACT------------------------------------------------------ACA---------GGC---------------------------TCAGGTCCT------------------GCAGTTTTT---GGTCTTATTTCAGGTATTGCTTATTTCTATGTTGTATATGAAATA---------------TGG------CTT---GGAGGTGCTTCAAAACTTGCAGCATCA------GCT---GGAGGCGCA---GTG---CAA---GCT---GCA---CAC---AAA---TCATTA---TGTTGGTTTGTATTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKA---A--GATK-QL------------MWK-MIFASTIMLVFGYFGE---A------V--YT------------------T---G---------SGP------AVF-GLISGIAYFYVVYEI-----W--L-GGASKLAAS--A-GGA-V-Q-A-A-H-K-SL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928956 [II-CFB-MS024] PRGD_OTU063_9ba1e74d6de941b40ac37ee4a0f14bae gb|KJ928956| PRGD_OTU063_9ba1e74d6de941b40ac37ee4a0f14bae, putative proteorhodopsin gene, partial cds. PRGD_OTU063_9ba1e74d6de941b40ac37ee4a0f14bae, putative proteorhodopsin gene, partial cds. KJ928956 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683) GTGCTTACTGTGCCTTTAATGTGCGTTGAATTTTACTTAATTCTCAAAGCAGCTGGTGCTACAAAACAATTAATGTGGAAAATGATTTTCGCTTCTATTGTAATGTTAGTGACCGGATATTTTGGAGAAGCAGTTTATACTACTGGATCAGGTCCTGCTGTATGGGGACTCGTTTCAGGACTTGCATACTTCTACATTGCATATGAAATATGGTTAGGTGGTGCTTCAAAATTAGCAGCAGCCGCAGGTGGAGCTGTTCAATCTGCACACAGAGCACTATGTTGGTTTGTTCTTGCA VLTVPLMCVEFYLILKAAGATKQLMWKMIFASIVMLVTGYFGEAVYTTGSGPAVWGLVSGLAYFYIAYEIWLGGASKLAAAAGGAVQSAHRALCWFVLA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGCTTACTGTGCCTTTAATGTGCGTTGAATTTTACTTAATTCTCAAAGCA---------GCT------GGTGCTACAAAA---CAATTA------------------------------------ATGTGGAAA---ATGATTTTCGCTTCTATTGTAATGTTAGTGACCGGATATTTTGGAGAA---------GCA------------------GTT------TATACT------------------------------------------------------ACT---------GGA---------------------------TCAGGTCCT------------------GCTGTATGG---GGACTCGTTTCAGGACTTGCATACTTCTACATTGCATATGAAATA---------------TGG------TTA---GGTGGTGCTTCAAAATTAGCAGCAGCC------GCA---GGTGGAGCT---GTT---CAA---TCT---GCA---CAC---AGA---GCACTA---TGTTGGTTTGTTCTTGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKA---A--GATK-QL------------MWK-MIFASIVMLVTGYFGE---A------V--YT------------------T---G---------SGP------AVW-GLVSGLAYFYIAYEI-----W--L-GGASKLAAA--A-GGA-V-Q-S-A-H-R-AL-CWFVLA-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928950 [II-CFB-MS024] PRGD_OTU063_4488f4d1fe8f9e9ed5f949c1d8762095 gb|KJ928950| PRGD_OTU063_4488f4d1fe8f9e9ed5f949c1d8762095, putative proteorhodopsin gene, partial cds. PRGD_OTU063_4488f4d1fe8f9e9ed5f949c1d8762095, putative proteorhodopsin gene, partial cds. KJ928950 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) GTGCTTACTGTGCCATTAATGTGTGTTGAATTCTATCTGATCCTTAGAGCAGCTGGAGCAACAAAACAATTGATGTGGAAAATGATTTTCGCTTCTGTTGTGATGTTAGTTACTGGTTACTTTGGAGAAGCAGTATACACAACAGGTTCAGGTCCCGCAGTTTGGGGTCTTGTTTCTGGTCTTGCATACTTCTGGATTGTCTACGAAATTTGGTTAGGTAGCGCTTCTAAGCTAGCTGCTTCAGCAGGTGGTGCGGTTCAGTCTGCACACAAAACACTTTGCTGGTTCGTACTTGTA VLTVPLMCVEFYLILRAAGATKQLMWKMIFASVVMLVTGYFGEAVYTTGSGPAVWGLVSGLAYFWIVYEIWLGSASKLAASAGGAVQSAHKTLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGCTTACTGTGCCATTAATGTGTGTTGAATTCTATCTGATCCTTAGAGCA---------GCT------GGAGCAACAAAA---CAATTG------------------------------------ATGTGGAAA---ATGATTTTCGCTTCTGTTGTGATGTTAGTTACTGGTTACTTTGGAGAA---------GCA------------------GTA------TACACA------------------------------------------------------ACA---------GGT---------------------------TCAGGTCCC------------------GCAGTTTGG---GGTCTTGTTTCTGGTCTTGCATACTTCTGGATTGTCTACGAAATT---------------TGG------TTA---GGTAGCGCTTCTAAGCTAGCTGCTTCA------GCA---GGTGGTGCG---GTT---CAG---TCT---GCA---CAC---AAA---ACACTT---TGCTGGTTCGTACTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILRA---A--GATK-QL------------MWK-MIFASVVMLVTGYFGE---A------V--YT------------------T---G---------SGP------AVW-GLVSGLAYFWIVYEI-----W--L-GSASKLAAS--A-GGA-V-Q-S-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928951 [II-CFB-MS024] PRGD_OTU063_5336ce481f6a536a03f37978d5766484 gb|KJ928951| PRGD_OTU063_5336ce481f6a536a03f37978d5766484, putative proteorhodopsin gene, partial cds. PRGD_OTU063_5336ce481f6a536a03f37978d5766484, putative proteorhodopsin gene, partial cds. KJ928951 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na GTGCTTACTGTGCCATTAATGTGTGTTGAATTCTATCTGATCCTTAGAGCAGCTGGAGCAACAAAACAATTGATGTGGAAAATGATTTTCGCTTCTGTTGTGATGTTAGTTACTGGTTACTTTGGAGAAGCAGTATACACAACAGGTTCAGGTCCTGCAGTTTGGGGTCTTGTTTCTGGTCTTGCATACTTCTGGATTGTCTACGAAATCTGGTTAGGTAGCGCTTCTAAGCTAGCTGCTTCAGCAGGTGGTGCGGTTCAGTCTGCACACAAAACACTTTGCTGGTTCGTACTTGTA VLTVPLMCVEFYLILRAAGATKQLMWKMIFASVVMLVTGYFGEAVYTTGSGPAVWGLVSGLAYFWIVYEIWLGSASKLAASAGGAVQSAHKTLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGCTTACTGTGCCATTAATGTGTGTTGAATTCTATCTGATCCTTAGAGCA---------GCT------GGAGCAACAAAA---CAATTG------------------------------------ATGTGGAAA---ATGATTTTCGCTTCTGTTGTGATGTTAGTTACTGGTTACTTTGGAGAA---------GCA------------------GTA------TACACA------------------------------------------------------ACA---------GGT---------------------------TCAGGTCCT------------------GCAGTTTGG---GGTCTTGTTTCTGGTCTTGCATACTTCTGGATTGTCTACGAAATC---------------TGG------TTA---GGTAGCGCTTCTAAGCTAGCTGCTTCA------GCA---GGTGGTGCG---GTT---CAG---TCT---GCA---CAC---AAA---ACACTT---TGCTGGTTCGTACTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILRA---A--GATK-QL------------MWK-MIFASVVMLVTGYFGE---A------V--YT------------------T---G---------SGP------AVW-GLVSGLAYFWIVYEI-----W--L-GSASKLAAS--A-GGA-V-Q-S-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928953 [II-CFB-MS024] PRGD_OTU063_63d4f43b8553f8b31903f16020e35727 gb|KJ928953| PRGD_OTU063_63d4f43b8553f8b31903f16020e35727, putative proteorhodopsin gene, partial cds. PRGD_OTU063_63d4f43b8553f8b31903f16020e35727, putative proteorhodopsin gene, partial cds. KJ928953 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na GTGCTTACTGTGCCATTAATGTGTGTTGAATTCTATCTGATCCTTAGAGCAGCTGGAGCAACAAAACAATTGATGTGGAAAATGATTTTCGCTTCTGCTGTGATGTTAGTTACTGGTTACTTTGGAGAAGCAGTCTACACAACAGGTTCAGGTCCTGCAGTTTGGGGTCTTGTTTCAGGTCTTGCATACTTCTGGATTGTTTACGAAATCTGGTTAGGTAGTGCTTCTAAACTAGCTGCTTCAGCAGGTGGTGCGGTTCAGTCTGCACACAAAACACTTTGCTGGTTCGTACTTGTA VLTVPLMCVEFYLILRAAGATKQLMWKMIFASAVMLVTGYFGEAVYTTGSGPAVWGLVSGLAYFWIVYEIWLGSASKLAASAGGAVQSAHKTLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGCTTACTGTGCCATTAATGTGTGTTGAATTCTATCTGATCCTTAGAGCA---------GCT------GGAGCAACAAAA---CAATTG------------------------------------ATGTGGAAA---ATGATTTTCGCTTCTGCTGTGATGTTAGTTACTGGTTACTTTGGAGAA---------GCA------------------GTC------TACACA------------------------------------------------------ACA---------GGT---------------------------TCAGGTCCT------------------GCAGTTTGG---GGTCTTGTTTCAGGTCTTGCATACTTCTGGATTGTTTACGAAATC---------------TGG------TTA---GGTAGTGCTTCTAAACTAGCTGCTTCA------GCA---GGTGGTGCG---GTT---CAG---TCT---GCA---CAC---AAA---ACACTT---TGCTGGTTCGTACTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILRA---A--GATK-QL------------MWK-MIFASAVMLVTGYFGE---A------V--YT------------------T---G---------SGP------AVW-GLVSGLAYFWIVYEI-----W--L-GSASKLAAS--A-GGA-V-Q-S-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928954 [II-CFB-MS024] PRGD_OTU063_706410662f36dcbdb2aec3ce24d297a7 gb|KJ928954| PRGD_OTU063_706410662f36dcbdb2aec3ce24d297a7, putative proteorhodopsin gene, partial cds. PRGD_OTU063_706410662f36dcbdb2aec3ce24d297a7, putative proteorhodopsin gene, partial cds. KJ928954 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) GTGCTTACTGTGCCATTAATGTGTGTTGAATTCTATCTGATCCTTAGAGCAGCTGGAGCAACAAAACAATTGATGTGGAAAATGATTTTCGCTTCTGCTGTGATGTTAGTTACTGGTTACTTTGGAGAAGCTGTCTACACAACAGGTTCAGGTCCTGCAGTTTGGGGTCTTGTTTCAGGTCTTGCATACTTCTGGATTGTTTACGAAATCTGGTTAGGTAGCGCTTCTAAACTAGCTGCTTCAGCAGGTGGTGCGGTTCAGTCAGCTCACAAAACACTTTGCTGGTTCGTACTTGTA VLTVPLMCVEFYLILRAAGATKQLMWKMIFASAVMLVTGYFGEAVYTTGSGPAVWGLVSGLAYFWIVYEIWLGSASKLAASAGGAVQSAHKTLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGCTTACTGTGCCATTAATGTGTGTTGAATTCTATCTGATCCTTAGAGCA---------GCT------GGAGCAACAAAA---CAATTG------------------------------------ATGTGGAAA---ATGATTTTCGCTTCTGCTGTGATGTTAGTTACTGGTTACTTTGGAGAA---------GCT------------------GTC------TACACA------------------------------------------------------ACA---------GGT---------------------------TCAGGTCCT------------------GCAGTTTGG---GGTCTTGTTTCAGGTCTTGCATACTTCTGGATTGTTTACGAAATC---------------TGG------TTA---GGTAGCGCTTCTAAACTAGCTGCTTCA------GCA---GGTGGTGCG---GTT---CAG---TCA---GCT---CAC---AAA---ACACTT---TGCTGGTTCGTACTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILRA---A--GATK-QL------------MWK-MIFASAVMLVTGYFGE---A------V--YT------------------T---G---------SGP------AVW-GLVSGLAYFWIVYEI-----W--L-GSASKLAAS--A-GGA-V-Q-S-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928945 [II-CFB-MS024] PRGD_OTU063_044cfae7a67da59a121adef151abd455 gb|KJ928945| PRGD_OTU063_044cfae7a67da59a121adef151abd455, putative proteorhodopsin gene, partial cds. PRGD_OTU063_044cfae7a67da59a121adef151abd455, putative proteorhodopsin gene, partial cds. KJ928945 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-33.28, 45.35) GTGCTTACTGTGCCATTAATGTGTGTTGAATTCTATCTGATCCTTAGAGCAGCTGGAGCAACAAAACAATTGATGTGGAAAATGATTTTCGCTTCTGTTGTGATGTTGGTTACTGGTTACTTTGGAGAAGCAATATACACAACAGGTTCAGGTCCTGCAGTTTGGGGACTTGTTTCAGGTCTTGCATACTTCTGGATTGTTTACGAAATCTGGTTAGGTAGCGCTTCTAAACTAGCTGCTTCAGCAGGTGGTGCGGTTCAGTCTGCACACAAAACACTTTGCTGGTTCGTACTTGTA VLTVPLMCVEFYLILRAAGATKQLMWKMIFASVVMLVTGYFGEAIYTTGSGPAVWGLVSGLAYFWIVYEIWLGSASKLAASAGGAVQSAHKTLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGCTTACTGTGCCATTAATGTGTGTTGAATTCTATCTGATCCTTAGAGCA---------GCT------GGAGCAACAAAA---CAATTG------------------------------------ATGTGGAAA---ATGATTTTCGCTTCTGTTGTGATGTTGGTTACTGGTTACTTTGGAGAA---------GCA------------------ATA------TACACA------------------------------------------------------ACA---------GGT---------------------------TCAGGTCCT------------------GCAGTTTGG---GGACTTGTTTCAGGTCTTGCATACTTCTGGATTGTTTACGAAATC---------------TGG------TTA---GGTAGCGCTTCTAAACTAGCTGCTTCA------GCA---GGTGGTGCG---GTT---CAG---TCT---GCA---CAC---AAA---ACACTT---TGCTGGTTCGTACTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILRA---A--GATK-QL------------MWK-MIFASVVMLVTGYFGE---A------I--YT------------------T---G---------SGP------AVW-GLVSGLAYFWIVYEI-----W--L-GSASKLAAS--A-GGA-V-Q-S-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928944 [II-CFB-MS024] PRGD_OTU063_otuREP_0dcb83e76a2d311c5a0a2fbb0e50af30 gb|KJ928944| PRGD_OTU063_otuREP_0dcb83e76a2d311c5a0a2fbb0e50af30, putative proteorhodopsin gene, partial cds. PRGD_OTU063_otuREP_0dcb83e76a2d311c5a0a2fbb0e50af30, putative proteorhodopsin gene, partial cds. KJ928944 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) GTGCTTACTGTGCCATTAATGTGTGTTGAATTCTATCTGATCCTTAGAGCAGCTGGAGCAACAAAACAATTGATGTGGAAAATGATTTTCGCTTCTATTGTGATGTTAGTTACTGGTTACTTTGGAGAAGCAGTATACACAACAGGTTCAGGCCCTGCAGTTTGGGGTCTTGTTTCAGGTCTTGCATACTTCTGGATTGTTTACGAAATCTGGTTAGGTAGCGCTTCTAAACTAGCTGCTTCAGCAGGTGGTGCTGTTCAGTCTGCACATAAAACACTTTGCTGGTTCGTACTTGTA VLTVPLMCVEFYLILRAAGATKQLMWKMIFASIVMLVTGYFGEAVYTTGSGPAVWGLVSGLAYFWIVYEIWLGSASKLAASAGGAVQSAHKTLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGCTTACTGTGCCATTAATGTGTGTTGAATTCTATCTGATCCTTAGAGCA---------GCT------GGAGCAACAAAA---CAATTG------------------------------------ATGTGGAAA---ATGATTTTCGCTTCTATTGTGATGTTAGTTACTGGTTACTTTGGAGAA---------GCA------------------GTA------TACACA------------------------------------------------------ACA---------GGT---------------------------TCAGGCCCT------------------GCAGTTTGG---GGTCTTGTTTCAGGTCTTGCATACTTCTGGATTGTTTACGAAATC---------------TGG------TTA---GGTAGCGCTTCTAAACTAGCTGCTTCA------GCA---GGTGGTGCT---GTT---CAG---TCT---GCA---CAT---AAA---ACACTT---TGCTGGTTCGTACTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILRA---A--GATK-QL------------MWK-MIFASIVMLVTGYFGE---A------V--YT------------------T---G---------SGP------AVW-GLVSGLAYFWIVYEI-----W--L-GSASKLAAS--A-GGA-V-Q-S-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928955 [II-CFB-MS024] PRGD_OTU063_7b674de45df46d796d5e2cc0431191f4 gb|KJ928955| PRGD_OTU063_7b674de45df46d796d5e2cc0431191f4, putative proteorhodopsin gene, partial cds. PRGD_OTU063_7b674de45df46d796d5e2cc0431191f4, putative proteorhodopsin gene, partial cds. KJ928955 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na GTGCTTACTGTGCCATTAATGTGTGTTGAATTCTATCTGATCCTTAGAGCAGCTGGAGCAACAAAACAATTGATGTGGAAAATGATTTTCGCTTCTATTGTGATGTTAGTTACTGGTTACTTTGGAGAAGCAGTCTACACAACAGGTTCAGGTCCTGCAGTTTGGGGTCTTGTTTCAGGTCTTGCATACTTCTGGATTGTTTACGAAATCTGGTTAGGTAGTGCTTCTAAACTAGCTGCTTCAGCAGGTGGTGCGGTTCAGTCTGCACACAAAACACTTTGCTGGTTCGTACTTGTA VLTVPLMCVEFYLILRAAGATKQLMWKMIFASIVMLVTGYFGEAVYTTGSGPAVWGLVSGLAYFWIVYEIWLGSASKLAASAGGAVQSAHKTLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGCTTACTGTGCCATTAATGTGTGTTGAATTCTATCTGATCCTTAGAGCA---------GCT------GGAGCAACAAAA---CAATTG------------------------------------ATGTGGAAA---ATGATTTTCGCTTCTATTGTGATGTTAGTTACTGGTTACTTTGGAGAA---------GCA------------------GTC------TACACA------------------------------------------------------ACA---------GGT---------------------------TCAGGTCCT------------------GCAGTTTGG---GGTCTTGTTTCAGGTCTTGCATACTTCTGGATTGTTTACGAAATC---------------TGG------TTA---GGTAGTGCTTCTAAACTAGCTGCTTCA------GCA---GGTGGTGCG---GTT---CAG---TCT---GCA---CAC---AAA---ACACTT---TGCTGGTTCGTACTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILRA---A--GATK-QL------------MWK-MIFASIVMLVTGYFGE---A------V--YT------------------T---G---------SGP------AVW-GLVSGLAYFWIVYEI-----W--L-GSASKLAAS--A-GGA-V-Q-S-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928946 [II-CFB-MS024] PRGD_OTU063_16deada4b48d452cb845a2040d68dbf5 gb|KJ928946| PRGD_OTU063_16deada4b48d452cb845a2040d68dbf5, putative proteorhodopsin gene, partial cds. PRGD_OTU063_16deada4b48d452cb845a2040d68dbf5, putative proteorhodopsin gene, partial cds. KJ928946 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185), English Channel (48.7717, -3.9683) GTATTGACTGTTCCATTAATGTGTGTAGAGTTCTATTTAATTTTGAAAGCTGCTGGTGCAACAAAACAATTGATGTGGAAAATGATTTTCGCTTCAATCGTTATGTTAGTTACTGGTTACTTTGGTGAAGCAGTTTACACAACAGGATCAGGTCCTGCTGTTTGGGGACTTATTTCAGGTCTTGCTTACTTCTGGATTGTTTATGAAATCTGGATGGGAAGTGCTTCTAAGCTAGCTGCCTCTGCAGGTGGAGCTGTTCAATCGGCTCATAAAACACTTTGTTGGTTCGTTCTTGTA VLTVPLMCVEFYLILKAAGATKQLMWKMIFASIVMLVTGYFGEAVYTTGSGPAVWGLISGLAYFWIVYEIWMGSASKLAASAGGAVQSAHKTLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTGACTGTTCCATTAATGTGTGTAGAGTTCTATTTAATTTTGAAAGCT---------GCT------GGTGCAACAAAA---CAATTG------------------------------------ATGTGGAAA---ATGATTTTCGCTTCAATCGTTATGTTAGTTACTGGTTACTTTGGTGAA---------GCA------------------GTT------TACACA------------------------------------------------------ACA---------GGA---------------------------TCAGGTCCT------------------GCTGTTTGG---GGACTTATTTCAGGTCTTGCTTACTTCTGGATTGTTTATGAAATC---------------TGG------ATG---GGAAGTGCTTCTAAGCTAGCTGCCTCT------GCA---GGTGGAGCT---GTT---CAA---TCG---GCT---CAT---AAA---ACACTT---TGTTGGTTCGTTCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKA---A--GATK-QL------------MWK-MIFASIVMLVTGYFGE---A------V--YT------------------T---G---------SGP------AVW-GLISGLAYFWIVYEI-----W--M-GSASKLAAS--A-GGA-V-Q-S-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ928949 [II-CFB-MS024] PRGD_OTU063_431b6d5f9bcafd4bcdfea914c2bb58cb gb|KJ928949| PRGD_OTU063_431b6d5f9bcafd4bcdfea914c2bb58cb, putative proteorhodopsin gene, partial cds. PRGD_OTU063_431b6d5f9bcafd4bcdfea914c2bb58cb, putative proteorhodopsin gene, partial cds. KJ928949 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.935, 18.508), Indian Ocean (-14.48, 113.45) GTGTTAACTGTACCATTAATGTGTGTAGAGTTCTATTTAATTCTTAAAGCGGCAGGTGCAACAAAACAATTGATGTGGAAAATGATTTTCGCTTCAATCGTTATGTTAGTGACGGGTTACTTCGGTGAAGCTGTTTACACGACAGGTTCAGGTCCTGCAATTTGGGGACTTATTTCAGGTCTTGCTTATTTCTGGATTGTTTATGAAATCTGGATGGGTAGCGCTTCTAAACTAGCTGCATCTGCAGGTGGAGCCGTTCAATCAGCACACAAAACTCTTTGCTGGTTCGTTCTTGTA VLTVPLMCVEFYLILKAAGATKQLMWKMIFASIVMLVTGYFGEAVYTTGSGPAIWGLISGLAYFWIVYEIWMGSASKLAASAGGAVQSAHKTLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTTAACTGTACCATTAATGTGTGTAGAGTTCTATTTAATTCTTAAAGCG---------GCA------GGTGCAACAAAA---CAATTG------------------------------------ATGTGGAAA---ATGATTTTCGCTTCAATCGTTATGTTAGTGACGGGTTACTTCGGTGAA---------GCT------------------GTT------TACACG------------------------------------------------------ACA---------GGT---------------------------TCAGGTCCT------------------GCAATTTGG---GGACTTATTTCAGGTCTTGCTTATTTCTGGATTGTTTATGAAATC---------------TGG------ATG---GGTAGCGCTTCTAAACTAGCTGCATCT------GCA---GGTGGAGCC---GTT---CAA---TCA---GCA---CAC---AAA---ACTCTT---TGCTGGTTCGTTCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKA---A--GATK-QL------------MWK-MIFASIVMLVTGYFGE---A------V--YT------------------T---G---------SGP------AIW-GLISGLAYFWIVYEI-----W--M-GSASKLAAS--A-GGA-V-Q-S-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929912 [II-CFB-MS024] PRGD_OTU363_otuREP_4b5c31f7f09253e607d59bf0a43e3d76 gb|KJ929912| PRGD_OTU363_otuREP_4b5c31f7f09253e607d59bf0a43e3d76, putative proteorhodopsin gene, partial cds. PRGD_OTU363_otuREP_4b5c31f7f09253e607d59bf0a43e3d76, putative proteorhodopsin gene, partial cds. KJ929912 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.935 18.508 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175; 33.935, 18.508) ATTTTAACCGTTCCATTAATGTGTGTAGAATTTTATTTAATTCTTAAAGCAGCTGGGGCTACAAAATCTTTATTATGGAAAATGATTTTCTATTCTGTAGTAATGTTAGTAACTGGTTATTTCGGTGAAGTAGTTTACAACACTGGCTCTGGCCCAGCTATCTGGGGTCTACTTTCGGGTATTGCTTATTTCGCAATAGTGTATGAAATTAAATTCGGTGGTGCTGCTAAACTTGCTGAAGCAGCAGGTGGTGCTGTTCAAAAGGCACACAACACTCTCTTCTGGTTTGTACTTGTA ILTVPLMCVEFYLILKAAGATKSLLWKMIFYSVVMLVTGYFGEVVYNTGSGPAIWGLLSGIAYFAIVYEIKFGGAAKLAEAAGGAVQKAHNTLFWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACCGTTCCATTAATGTGTGTAGAATTTTATTTAATTCTTAAAGCA---------GCT------GGGGCTACAAAA---TCTTTA------------------------------------TTATGGAAA---ATGATTTTCTATTCTGTAGTAATGTTAGTAACTGGTTATTTCGGTGAA---------GTA------------------GTT------TACAAC------------------------------------------------------------------------------------------------ACTGGCTCT------------GGCCCAGCTATCTGG---GGTCTACTTTCGGGTATTGCTTATTTCGCAATAGTGTATGAAATT---------------AAA------TTC---GGTGGTGCTGCTAAACTTGCTGAAGCA------GCA---GGTGGTGCT---GTT---CAA---AAG---GCA---CAC---AAC---ACTCTC---TTCTGGTTTGTACTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATK-SL------------LWK-MIFYSVVMLVTGYFGE---V------V--YN--------------------------------TGS----GPAIW-GLLSGIAYFAIVYEI-----K--F-GGAAKLAEA--A-GGA-V-Q-K-A-H-N-TL-FWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929529 [II-CFB-MS024] PRGD_OTU145_93cb77a4f11a608527feca3e2c3d2233 gb|KJ929529| PRGD_OTU145_93cb77a4f11a608527feca3e2c3d2233, putative proteorhodopsin gene, partial cds. PRGD_OTU145_93cb77a4f11a608527feca3e2c3d2233, putative proteorhodopsin gene, partial cds. KJ929529 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na GTTTTAACTGTTCCCTTGATGTGCGTAGAATTTTATTTAATTCTTAAAATAGCAGGAGCAACAAAAAAATTAATGTGGACATTAATTGGAGCTTCCGTTGTAATGCTTGTAACTGGTTATTTCGGTGAAGCTGTATATCAAGAAAATGCTGCACTATGGGGATTCATTTCTGGAGCTGCATATTTCTACATCGTTTATTTAATCATGTTCGGAGAGGCAAAAGAATTGGCGACAAAAGCTGGAGGAAGTGTCTTGAGTGCGCACAACATGCTTGTAAAGTTTGTCCTAATA VLTVPLMCVEFYLILKIAGATKKLMWTLIGASVVMLVTGYFGEAVYQENAALWGFISGAAYFYIVYLIMFGEAKELATKAGGSVLSAHNMLVKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTTAACTGTTCCCTTGATGTGCGTAGAATTTTATTTAATTCTTAAAATA---------GCA------GGAGCAACAAAA---AAATTA------------------------------------ATGTGGACA---TTAATTGGAGCTTCCGTTGTAATGCTTGTAACTGGTTATTTCGGTGAA---------GCT------------------GTA------TATCAA------------------------------------------------------------------------------------------------GAAAATGCT------------------GCACTATGG---GGATTCATTTCTGGAGCTGCATATTTCTACATCGTTTATTTAATC---------------ATG------TTC---GGAGAGGCAAAAGAATTGGCGACAAAA------GCT---GGAGGAAGT---GTC---TTG---AGT---GCG---CAC---AAC---ATGCTT---GTAAAGTTTGTCCTAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKI---A--GATK-KL------------MWT-LIGASVVMLVTGYFGE---A------V--YQ--------------------------------ENA------ALW-GFISGAAYFYIVYLI-----M--F-GEAKELATK--A-GGS-V-L-S-A-H-N-ML-VKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929526 [II-CFB-MS024] PRGD_OTU145_otuREP_e3911d2e3a3eb6ca9cda6e78844d1f28 gb|KJ929526| PRGD_OTU145_otuREP_e3911d2e3a3eb6ca9cda6e78844d1f28, putative proteorhodopsin gene, partial cds. PRGD_OTU145_otuREP_e3911d2e3a3eb6ca9cda6e78844d1f28, putative proteorhodopsin gene, partial cds. KJ929526 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683) GTTTTAACTGTTCCTTTGATGTGCGTAGAATTTTATTTAATTCTTAAAATAGCAGGAGCAACAAAAAAATTAATGTGGACATTAATTGGAGCTTCCGTTGTAATGCTTGTAACTGGTTATTTCGGTGAAGCTGTATATCAAGAAAATGCTGCACTATGGGGATTTATCTCTGGAGCTGCATATTTCTACATCGTTTATTTAATCATGTTCGGAGAGGCAAAAGAGTTGGCGACAAAAGCTGGTGGAAGTGTCTTGAGTGCACACAACATGCTTGTGAAATTTGTTCTAATA VLTVPLMCVEFYLILKIAGATKKLMWTLIGASVVMLVTGYFGEAVYQENAALWGFISGAAYFYIVYLIMFGEAKELATKAGGSVLSAHNMLVKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTTAACTGTTCCTTTGATGTGCGTAGAATTTTATTTAATTCTTAAAATA---------GCA------GGAGCAACAAAA---AAATTA------------------------------------ATGTGGACA---TTAATTGGAGCTTCCGTTGTAATGCTTGTAACTGGTTATTTCGGTGAA---------GCT------------------GTA------TATCAA------------------------------------------------------------------------------------------------GAAAATGCT------------------GCACTATGG---GGATTTATCTCTGGAGCTGCATATTTCTACATCGTTTATTTAATC---------------ATG------TTC---GGAGAGGCAAAAGAGTTGGCGACAAAA------GCT---GGTGGAAGT---GTC---TTG---AGT---GCA---CAC---AAC---ATGCTT---GTGAAATTTGTTCTAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKI---A--GATK-KL------------MWT-LIGASVVMLVTGYFGE---A------V--YQ--------------------------------ENA------ALW-GFISGAAYFYIVYLI-----M--F-GEAKELATK--A-GGS-V-L-S-A-H-N-ML-VKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929527 [II-CFB-MS024] PRGD_OTU145_1277c48ebec1ebe3615d557f1e52cce0 gb|KJ929527| PRGD_OTU145_1277c48ebec1ebe3615d557f1e52cce0, putative proteorhodopsin gene, partial cds. PRGD_OTU145_1277c48ebec1ebe3615d557f1e52cce0, putative proteorhodopsin gene, partial cds. KJ929527 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATACTTACTGTTCCATTGATGTGCGTTGAGTTTTATTTAATCCTGAAAGTAGCTGGTGCAAAGAAAAACTTAATGTGGACACTAATCGGAGCTTCTGTAGTCATGTTGGTTACAGGCTATTTGGGTGAAGCTGTTTACCCGGGTAATGCTGCTTTGTGGGGATTCATTTCTGGAGCTGCATATTTCTACATTGTTTATTTAATCATGTTCGGAGAAGCAAAAGACTTAGCCACAAAAGCGGGTGGAAATGTCTTAAGTGCACACAACATGCTTGTGAAGTTTGTACTTATC ILTVPLMCVEFYLILKVAGAKKNLMWTLIGASVVMLVTGYLGEAVYPGNAALWGFISGAAYFYIVYLIMFGEAKDLATKAGGNVLSAHNMLVKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTTACTGTTCCATTGATGTGCGTTGAGTTTTATTTAATCCTGAAAGTA---------GCT------GGTGCAAAGAAA---AACTTA------------------------------------ATGTGGACA---CTAATCGGAGCTTCTGTAGTCATGTTGGTTACAGGCTATTTGGGTGAA---------GCT------------------GTT------TACCCG------------------------------------------------------------------------------------------------GGTAATGCT------------------GCTTTGTGG---GGATTCATTTCTGGAGCTGCATATTTCTACATTGTTTATTTAATC---------------ATG------TTC---GGAGAAGCAAAAGACTTAGCCACAAAA------GCG---GGTGGAAAT---GTC---TTA---AGT---GCA---CAC---AAC---ATGCTT---GTGAAGTTTGTACTTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GAKK-NL------------MWT-LIGASVVMLVTGYLGE---A------V--YP--------------------------------GNA------ALW-GFISGAAYFYIVYLI-----M--F-GEAKDLATK--A-GGN-V-L-S-A-H-N-ML-VKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929528 [II-CFB-MS024] PRGD_OTU145_5d63c3abda5c5aab1d83728a34927d1e gb|KJ929528| PRGD_OTU145_5d63c3abda5c5aab1d83728a34927d1e, putative proteorhodopsin gene, partial cds. PRGD_OTU145_5d63c3abda5c5aab1d83728a34927d1e, putative proteorhodopsin gene, partial cds. KJ929528 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; ; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-14.48, 113.45) ATTTTAACTGTTCCATTGATGTGTGTAGAGTTTTATCTAATTCTAAAAGTAGCAGGCGCAACGAAAAAACTTTTATGGACACTTATCGGTGCATCTGTTGTTATGTTGGTCACAGGATACTTTGGAGAAGCTGTTTATGTCGAAAGCGCAGCCATGTGGGGATTAATTTCAGGTCTTGCATATTTCTACATCGTTTACTTAATAATGTTTGGAGAAGCAAAAGCCTTGGCCACAAAAGCTGGTGGCAATGTTTTAAACGCTCACAATATGTTGTGTAAGTTTGTTCTTATT ILTVPLMCVEFYLILKVAGATKKLLWTLIGASVVMLVTGYFGEAVYVESAAMWGLISGLAYFYIVYLIMFGEAKALATKAGGNVLNAHNMLCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACTGTTCCATTGATGTGTGTAGAGTTTTATCTAATTCTAAAAGTA---------GCA------GGCGCAACGAAA---AAACTT------------------------------------TTATGGACA---CTTATCGGTGCATCTGTTGTTATGTTGGTCACAGGATACTTTGGAGAA---------GCT------------------GTT------TATGTC------------------------------------------------------------------------------------------------GAAAGCGCA------------------GCCATGTGG---GGATTAATTTCAGGTCTTGCATATTTCTACATCGTTTACTTAATA---------------ATG------TTT---GGAGAAGCAAAAGCCTTGGCCACAAAA------GCT---GGTGGCAAT---GTT---TTA---AAC---GCT---CAC---AAT---ATGTTG---TGTAAGTTTGTTCTTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-KL------------LWT-LIGASVVMLVTGYFGE---A------V--YV--------------------------------ESA------AMW-GLISGLAYFYIVYLI-----M--F-GEAKALATK--A-GGN-V-L-N-A-H-N-ML-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929304 [II-CFB-MS024] PRGD_OTU101_6ada24bb5415887e9dfa4d400bdf03a2 gb|KJ929304| PRGD_OTU101_6ada24bb5415887e9dfa4d400bdf03a2, putative proteorhodopsin gene, partial cds. PRGD_OTU101_6ada24bb5415887e9dfa4d400bdf03a2, putative proteorhodopsin gene, partial cds. KJ929304 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683) ATTCTTACAGTTCCATTAATGTGCGTTGAATTCTATTTGATTCTAAAGGCCGCAGGAGCAACAAAGAAATTAATGTGGACATTGATTGGAGCATCAGTAGTAATGTTAGTAACAGGATACTGGGGTGAAGGTGTTGACAGAGACAACGCAGCATTGTGGGGATTGATTTCTGGTCTTTCTTACTTCTACATTGTTTATTTAATTGCCTTTGGAGAAGCAAAAGCTTTGGCAACAAAAGCAGGTGGAGCAGTTTTAAACGCACACAATACACTTGTAAAGTTCGTTGTTATC ILTVPLMCVEFYLILKAAGATKKLMWTLIGASVVMLVTGYWGEGVDRDNAALWGLISGLSYFYIVYLIAFGEAKALATKAGGAVLNAHNTLVKFVVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTACAGTTCCATTAATGTGCGTTGAATTCTATTTGATTCTAAAGGCC---------GCA------GGAGCAACAAAG---AAATTA------------------------------------ATGTGGACA---TTGATTGGAGCATCAGTAGTAATGTTAGTAACAGGATACTGGGGTGAA---------GGT------------------GTT------GACAGA------------------------------------------------------------------------------------------------GACAACGCA------------------GCATTGTGG---GGATTGATTTCTGGTCTTTCTTACTTCTACATTGTTTATTTAATT---------------GCC------TTT---GGAGAAGCAAAAGCTTTGGCAACAAAA------GCA---GGTGGAGCA---GTT---TTA---AAC---GCA---CAC---AAT---ACACTT---GTAAAGTTCGTTGTTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATK-KL------------MWT-LIGASVVMLVTGYWGE---G------V--DR--------------------------------DNA------ALW-GLISGLSYFYIVYLI-----A--F-GEAKALATK--A-GGA-V-L-N-A-H-N-TL-VKFVVI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929306 [II-CFB-MS024] PRGD_OTU101_b87fb3c3e03938b2d6e33ee6c51f3eb5 gb|KJ929306| PRGD_OTU101_b87fb3c3e03938b2d6e33ee6c51f3eb5, putative proteorhodopsin gene, partial cds. PRGD_OTU101_b87fb3c3e03938b2d6e33ee6c51f3eb5, putative proteorhodopsin gene, partial cds. KJ929306 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833) ATTTTAACGGTTCCATTGATGTGTGTAGAGTTCTATTTAATTTTAAAGGCGGCAGGTGCTACCAAGAAATTAATGTGGACATTGATTGGAGCATCAGTTGTAATGTTAGTTACAGGATACTGGGGTGAAGGTGTTGACAGAGACAACGCAGCAATGTGGGGTTTACTTTCTGGTCTTGCTTATTTCTACATTGTTTATTTAATTGCCTTTGGAGAAGCAAAAGCTTTGGCAACAAAAGCAGGTGGAGCAGTTTTAAACGCACACAATACACTTGTAAAGTTCGTTGTTATC ILTVPLMCVEFYLILKAAGATKKLMWTLIGASVVMLVTGYWGEGVDRDNAAMWGLLSGLAYFYIVYLIAFGEAKALATKAGGAVLNAHNTLVKFVVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACGGTTCCATTGATGTGTGTAGAGTTCTATTTAATTTTAAAGGCG---------GCA------GGTGCTACCAAG---AAATTA------------------------------------ATGTGGACA---TTGATTGGAGCATCAGTTGTAATGTTAGTTACAGGATACTGGGGTGAA---------GGT------------------GTT------GACAGA------------------------------------------------------------------------------------------------GACAACGCA------------------GCAATGTGG---GGTTTACTTTCTGGTCTTGCTTATTTCTACATTGTTTATTTAATT---------------GCC------TTT---GGAGAAGCAAAAGCTTTGGCAACAAAA------GCA---GGTGGAGCA---GTT---TTA---AAC---GCA---CAC---AAT---ACACTT---GTAAAGTTCGTTGTTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATK-KL------------MWT-LIGASVVMLVTGYWGE---G------V--DR--------------------------------DNA------AMW-GLLSGLAYFYIVYLI-----A--F-GEAKALATK--A-GGA-V-L-N-A-H-N-TL-VKFVVI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929302 [II-CFB-MS024] PRGD_OTU101_otuREP_78c8b8976aaf2dc791c15069d1409de6 gb|KJ929302| PRGD_OTU101_otuREP_78c8b8976aaf2dc791c15069d1409de6, putative proteorhodopsin gene, partial cds. PRGD_OTU101_otuREP_78c8b8976aaf2dc791c15069d1409de6, putative proteorhodopsin gene, partial cds. KJ929302 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) ATTCTTACAGTTCCATTAATGTGCGTTGAGTTTTATTTGATTCTTAAAGCAGCTGGAGCAGGTAAGAAATTGATGTGGACCTTGATTGGTGCCTCAACTGTAATGTTAGTTACAGGATATTGGGGTGAAGGTGTTGATAGAGATAATGCAGCACTTTGGGGCTTGGTTTCTGGTCTTGCCTACTTCTATATTGTTTACTTAATTGCTGTTGGTGAAGCGAAAGAGTTGGCAACAAAAGCAGGAGGAGCAGTATTAAAAGCTCACAATACACTTGTAAAGTTTGTTATTATT ILTVPLMCVEFYLILKAAGAGKKLMWTLIGASTVMLVTGYWGEGVDRDNAALWGLVSGLAYFYIVYLIAVGEAKELATKAGGAVLKAHNTLVKFVII ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTACAGTTCCATTAATGTGCGTTGAGTTTTATTTGATTCTTAAAGCA---------GCT------GGAGCAGGTAAG---AAATTG------------------------------------ATGTGGACC---TTGATTGGTGCCTCAACTGTAATGTTAGTTACAGGATATTGGGGTGAA---------GGT------------------GTT------GATAGA------------------------------------------------------------------------------------------------GATAATGCA------------------GCACTTTGG---GGCTTGGTTTCTGGTCTTGCCTACTTCTATATTGTTTACTTAATT---------------GCT------GTT---GGTGAAGCGAAAGAGTTGGCAACAAAA------GCA---GGAGGAGCA---GTA---TTA---AAA---GCT---CAC---AAT---ACACTT---GTAAAGTTTGTTATTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GAGK-KL------------MWT-LIGASTVMLVTGYWGE---G------V--DR--------------------------------DNA------ALW-GLVSGLAYFYIVYLI-----A--V-GEAKELATK--A-GGA-V-L-K-A-H-N-TL-VKFVII-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929455 [II-CFB-MS024] PRGD_OTU128_b550397e243dea91eb6d478a40db05bc gb|KJ929455| PRGD_OTU128_b550397e243dea91eb6d478a40db05bc, putative proteorhodopsin gene, partial cds. PRGD_OTU128_b550397e243dea91eb6d478a40db05bc, putative proteorhodopsin gene, partial cds. KJ929455 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTCTTACTGTTCCATTAATGTGTGTTGAATTTTACCTTATATTAAAGGTCGCTGGTGCAACAAAAAAACTGATGTGGACTTTGATTGGTGCCTCAGTTGTAATGCTAGTAACTGGTTATTGGGGAGAAGCAATTCCTGGTTCTAACTCCGCAATGTGGGGAGCTGTTTCTGGAGCTGCTTATTTTTACATCGTTTATCTAATTTTCTTTGGAGAGGCGAAAACTTTGGCAACACAAGCAGGTGGCCATGTTTTAAATGCTCACAATATTCTGTGTAAGTTCGTTTTAATA ILTVPLMCVEFYLILKVAGATKKLMWTLIGASVVMLVTGYWGEAIPGSNSAMWGAVSGAAYFYIVYLIFFGEAKTLATQAGGHVLNAHNILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTACTGTTCCATTAATGTGTGTTGAATTTTACCTTATATTAAAGGTC---------GCT------GGTGCAACAAAA---AAACTG------------------------------------ATGTGGACT---TTGATTGGTGCCTCAGTTGTAATGCTAGTAACTGGTTATTGGGGAGAA---------GCA------------------ATT------CCTGGT------------------------------------------------------------------------------------------------TCTAACTCC------------------GCAATGTGG---GGAGCTGTTTCTGGAGCTGCTTATTTTTACATCGTTTATCTAATT---------------TTC------TTT---GGAGAGGCGAAAACTTTGGCAACACAA------GCA---GGTGGCCAT---GTT---TTA---AAT---GCT---CAC---AAT---ATTCTG---TGTAAGTTCGTTTTAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-KL------------MWT-LIGASVVMLVTGYWGE---A------I--PG--------------------------------SNS------AMW-GAVSGAAYFYIVYLI-----F--F-GEAKTLATQ--A-GGH-V-L-N-A-H-N-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929456 [II-CFB-MS024] PRGD_OTU128_b5797f6c821dd67eb9dcff1e5d7360ba gb|KJ929456| PRGD_OTU128_b5797f6c821dd67eb9dcff1e5d7360ba, putative proteorhodopsin gene, partial cds. PRGD_OTU128_b5797f6c821dd67eb9dcff1e5d7360ba, putative proteorhodopsin gene, partial cds. KJ929456 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTCTTACTGTTCCATTAATGTGTGTTGAATTTTACCTTATATTAAAGGTCGCTGGTGCAACAAAAAAACTGATGTGGACTTTGATTGGTGCCTCAGTTGTAATGCTAGTAACTGGTTATTGGGGAGAAGCGATTCCTGGTTCTAACTCCGCAATGTGGGGAGCTGTTTCTGGAGCTGCTTATTTTTACATAGTTTATCTAATTTTCTTTGGAGAGGCGAAAACTTTGGCAACACAAGCAGGTGGCCATGTTTTAAATGCTCACAATATTCTGTGTAAGTTCGTTTTAATA ILTVPLMCVEFYLILKVAGATKKLMWTLIGASVVMLVTGYWGEAIPGSNSAMWGAVSGAAYFYIVYLIFFGEAKTLATQAGGHVLNAHNILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTACTGTTCCATTAATGTGTGTTGAATTTTACCTTATATTAAAGGTC---------GCT------GGTGCAACAAAA---AAACTG------------------------------------ATGTGGACT---TTGATTGGTGCCTCAGTTGTAATGCTAGTAACTGGTTATTGGGGAGAA---------GCG------------------ATT------CCTGGT------------------------------------------------------------------------------------------------TCTAACTCC------------------GCAATGTGG---GGAGCTGTTTCTGGAGCTGCTTATTTTTACATAGTTTATCTAATT---------------TTC------TTT---GGAGAGGCGAAAACTTTGGCAACACAA------GCA---GGTGGCCAT---GTT---TTA---AAT---GCT---CAC---AAT---ATTCTG---TGTAAGTTCGTTTTAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-KL------------MWT-LIGASVVMLVTGYWGE---A------I--PG--------------------------------SNS------AMW-GAVSGAAYFYIVYLI-----F--F-GEAKTLATQ--A-GGH-V-L-N-A-H-N-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929453 [II-CFB-MS024] PRGD_OTU128_602ad69017a16297ee2dbcd6ba5d4aec gb|KJ929453| PRGD_OTU128_602ad69017a16297ee2dbcd6ba5d4aec, putative proteorhodopsin gene, partial cds. PRGD_OTU128_602ad69017a16297ee2dbcd6ba5d4aec, putative proteorhodopsin gene, partial cds. KJ929453 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) ATTCTTACTGTTCCTTTAATGTGTGTTGAATTCTATTTAATTTTGAAGGTAGCAGGAGCAACTAAAAAGTTGATGTGGACATTGATTGGTGCTTCAGTTGTTATGTTAGTAACCGGTTATTGGGGAGAGGCGATTCCTAATTCTAACTCTGCAATGTGGGGTGCTGTATCAGGAGCTGCTTATTTTTACATTGTTTATTTGATATTCTTTGGAGAAGCAAAAGCTCTTGCCACTCAAGCAGGTGGACATGTTTTGAACGCTCACAATATTCTCTGTAAATTTGTTCTTATC ILTVPLMCVEFYLILKVAGATKKLMWTLIGASVVMLVTGYWGEAIPNSNSAMWGAVSGAAYFYIVYLIFFGEAKALATQAGGHVLNAHNILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTACTGTTCCTTTAATGTGTGTTGAATTCTATTTAATTTTGAAGGTA---------GCA------GGAGCAACTAAA---AAGTTG------------------------------------ATGTGGACA---TTGATTGGTGCTTCAGTTGTTATGTTAGTAACCGGTTATTGGGGAGAG---------GCG------------------ATT------CCTAAT------------------------------------------------------------------------------------------------TCTAACTCT------------------GCAATGTGG---GGTGCTGTATCAGGAGCTGCTTATTTTTACATTGTTTATTTGATA---------------TTC------TTT---GGAGAAGCAAAAGCTCTTGCCACTCAA------GCA---GGTGGACAT---GTT---TTG---AAC---GCT---CAC---AAT---ATTCTC---TGTAAATTTGTTCTTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-KL------------MWT-LIGASVVMLVTGYWGE---A------I--PN--------------------------------SNS------AMW-GAVSGAAYFYIVYLI-----F--F-GEAKALATQ--A-GGH-V-L-N-A-H-N-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929452 [II-CFB-MS024] PRGD_OTU128_otuREP_899405be64f5a5fd2a0fe501013cdd1a gb|KJ929452| PRGD_OTU128_otuREP_899405be64f5a5fd2a0fe501013cdd1a, putative proteorhodopsin gene, partial cds. PRGD_OTU128_otuREP_899405be64f5a5fd2a0fe501013cdd1a, putative proteorhodopsin gene, partial cds. KJ929452 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097), Arctic Ocean-Pacific side (72.0542, -130.8781; ; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45) ATTCTAACGGTTCCATTAATGTGTATTGAGTTCTACTTGATTTTAAAGGTAGCGGGTGCAACAAAAAAATTGATGTGGACATTGATTGGTGCTTCGGTAGTGATGTTAGTCACTGGATATTGGGGAGAAGCAATCCCTAATTCTAACTCTGCAATGTGGGGAGCTGTTTCTGGAGCTGCTTATTTCTACATTGTCTACTTAATTTTCTTTGGAGAGGCGAAAGCCCTTGCAACACAAGCCGGTGGTCATGTCTTAAATGCTCACAATATTCTGTGTAAGTTTGTGCTTATC ILTVPLMCIEFYLILKVAGATKKLMWTLIGASVVMLVTGYWGEAIPNSNSAMWGAVSGAAYFYIVYLIFFGEAKALATQAGGHVLNAHNILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTAACGGTTCCATTAATGTGTATTGAGTTCTACTTGATTTTAAAGGTA---------GCG------GGTGCAACAAAA---AAATTG------------------------------------ATGTGGACA---TTGATTGGTGCTTCGGTAGTGATGTTAGTCACTGGATATTGGGGAGAA---------GCA------------------ATC------CCTAAT------------------------------------------------------------------------------------------------TCTAACTCT------------------GCAATGTGG---GGAGCTGTTTCTGGAGCTGCTTATTTCTACATTGTCTACTTAATT---------------TTC------TTT---GGAGAGGCGAAAGCCCTTGCAACACAA------GCC---GGTGGTCAT---GTC---TTA---AAT---GCT---CAC---AAT---ATTCTG---TGTAAGTTTGTGCTTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCIEFYLILKV---A--GATK-KL------------MWT-LIGASVVMLVTGYWGE---A------I--PN--------------------------------SNS------AMW-GAVSGAAYFYIVYLI-----F--F-GEAKALATQ--A-GGH-V-L-N-A-H-N-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929454 [II-CFB-MS024] PRGD_OTU128_9f1819adb0ca1a5cf3d8823fd380ae29 gb|KJ929454| PRGD_OTU128_9f1819adb0ca1a5cf3d8823fd380ae29, putative proteorhodopsin gene, partial cds. PRGD_OTU128_9f1819adb0ca1a5cf3d8823fd380ae29, putative proteorhodopsin gene, partial cds. KJ929454 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-35.05, 23.73) ATTCTAACGGTTCCATTAATGTGTATTGAGTTCTACTTGATTTTAAAGGTAGCGGGTGCAACAAAAAAATTGATGTGGACATTGATTGGTGCTTCGGTAGTGATGTTAGTCACCGGGTATTGGGGAGAAGCTATCCCTAATTCTAACTCTGCAATGTGGGGAGCTGTTTCTGGAGCTGCTTATTTCTACATTGTCTACTTAATTTTCTTTGGAGAGGCGAAAGCCCTTGCAACACAAGCCGGTGGTCATGTCTTAAATGCTCACAATATTCTGTGTAAGTTTGTGCTTATC ILTVPLMCIEFYLILKVAGATKKLMWTLIGASVVMLVTGYWGEAIPNSNSAMWGAVSGAAYFYIVYLIFFGEAKALATQAGGHVLNAHNILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTAACGGTTCCATTAATGTGTATTGAGTTCTACTTGATTTTAAAGGTA---------GCG------GGTGCAACAAAA---AAATTG------------------------------------ATGTGGACA---TTGATTGGTGCTTCGGTAGTGATGTTAGTCACCGGGTATTGGGGAGAA---------GCT------------------ATC------CCTAAT------------------------------------------------------------------------------------------------TCTAACTCT------------------GCAATGTGG---GGAGCTGTTTCTGGAGCTGCTTATTTCTACATTGTCTACTTAATT---------------TTC------TTT---GGAGAGGCGAAAGCCCTTGCAACACAA------GCC---GGTGGTCAT---GTC---TTA---AAT---GCT---CAC---AAT---ATTCTG---TGTAAGTTTGTGCTTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCIEFYLILKV---A--GATK-KL------------MWT-LIGASVVMLVTGYWGE---A------I--PN--------------------------------SNS------AMW-GAVSGAAYFYIVYLI-----F--F-GEAKALATQ--A-GGH-V-L-N-A-H-N-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929785 [II-CFB-MS024] PRGD_OTU244_7ade4b13de90dd9d58b23c8ec9cb4728 gb|KJ929785| PRGD_OTU244_7ade4b13de90dd9d58b23c8ec9cb4728, putative proteorhodopsin gene, partial cds. PRGD_OTU244_7ade4b13de90dd9d58b23c8ec9cb4728, putative proteorhodopsin gene, partial cds. KJ929785 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175) GTACTTACTGTTCCGTTAATGTGTGTTGAGTTTTATTTAATTCTGAAAGCTGCTGGGGCCACTAAAAAACACATGTGGACTTTAATAGTTGCATCTACTGCAATGTTGGTATTTGGATATGTTGGTGAAAGTGATTTAGGCAAAAACCAAGCTGCACTTTGGGGAGCATTTTCTGGAGCTGCATATTTCTATGTAGTTTATTTAATTTTCTTCGGAGAACTAAAAGCTTTAGCTACTTCAGCTGGAGGGGCAACATTAAAAGCACACAACATCTTAGCTAAATTTGTGCTAATC VLTVPLMCVEFYLILKAAGATKKHMWTLIVASTAMLVFGYVGESDLGKNQAALWGAFSGAAYFYVVYLIFFGELKALATSAGGATLKAHNILAKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTACTTACTGTTCCGTTAATGTGTGTTGAGTTTTATTTAATTCTGAAAGCT---------GCT------GGGGCCACTAAA---AAACAC------------------------------------ATGTGGACT---TTAATAGTTGCATCTACTGCAATGTTGGTATTTGGATATGTTGGTGAA------------------------------AGT------GATTTA------------------------------------------------------GGC---------AAA---------------------------AACCAAGCT------------------GCACTTTGG---GGAGCATTTTCTGGAGCTGCATATTTCTATGTAGTTTATTTAATT---------------TTC------TTC---GGAGAACTAAAAGCTTTAGCTACTTCA------GCT---GGAGGGGCA---ACA---TTA---AAA---GCA---CAC---AAC---ATCTTA---GCTAAATTTGTGCTAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKA---A--GATK-KH------------MWT-LIVASTAMLVFGYVGE----------S--DL------------------G---K---------NQA------ALW-GAFSGAAYFYVVYLI-----F--F-GELKALATS--A-GGA-T-L-K-A-H-N-IL-AKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929784 [II-CFB-MS024] PRGD_OTU244_otuREP_ee32cc7cc2a8bd0338d2af571f511398 gb|KJ929784| PRGD_OTU244_otuREP_ee32cc7cc2a8bd0338d2af571f511398, putative proteorhodopsin gene, partial cds. PRGD_OTU244_otuREP_ee32cc7cc2a8bd0338d2af571f511398, putative proteorhodopsin gene, partial cds. KJ929784 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na GCACTTACTGTTCCGTTAATGTGTGTTGAGTTTTATTTAATTCTGAAAGCTGCTGGGGCCACTAAAAAACACATGTGGACTTTAATAGTTGCATCTACTGCAATGTTGGTATTTGGATATGTTGGTGAAAGTGATTTAGGCAAAAACCAAGCTGCACTTTGGGGAGCATTTTCTGGAGCTGCATACTTCTATGTAGTGTATTTAATTTTCTTCGGAGAACTAAAAGCTTTAGCTACTTCAGCTGGAGGGGCAACATTAAAAGCACACAACATCTTAGCTAAATTTGTGCTAATC ALTVPLMCVEFYLILKAAGATKKHMWTLIVASTAMLVFGYVGESDLGKNQAALWGAFSGAAYFYVVYLIFFGELKALATSAGGATLKAHNILAKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACTTACTGTTCCGTTAATGTGTGTTGAGTTTTATTTAATTCTGAAAGCT---------GCT------GGGGCCACTAAA---AAACAC------------------------------------ATGTGGACT---TTAATAGTTGCATCTACTGCAATGTTGGTATTTGGATATGTTGGTGAA------------------------------AGT------GATTTA------------------------------------------------------GGC---------AAA---------------------------AACCAAGCT------------------GCACTTTGG---GGAGCATTTTCTGGAGCTGCATACTTCTATGTAGTGTATTTAATT---------------TTC------TTC---GGAGAACTAAAAGCTTTAGCTACTTCA------GCT---GGAGGGGCA---ACA---TTA---AAA---GCA---CAC---AAC---ATCTTA---GCTAAATTTGTGCTAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALTVPLMCVEFYLILKA---A--GATK-KH------------MWT-LIVASTAMLVFGYVGE----------S--DL------------------G---K---------NQA------ALW-GAFSGAAYFYVVYLI-----F--F-GELKALATS--A-GGA-T-L-K-A-H-N-IL-AKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929305 [II-CFB-MS024] PRGD_OTU101_b8156667da65edef32b95de653aa81c2 gb|KJ929305| PRGD_OTU101_b8156667da65edef32b95de653aa81c2, putative proteorhodopsin gene, partial cds. PRGD_OTU101_b8156667da65edef32b95de653aa81c2, putative proteorhodopsin gene, partial cds. KJ929305 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683) ATACTTACTGTTCCATTAATGTGCGTTGAATTCTACTTAATTCTTAGAGCAGCTGGTGCAACTAAAAAATTAATGTGGACACTTATTGCAGCATCTACAGTAATGTTAGTTACTGGATACTGGGGAGAAGGTGTTGATAGAGACAATGCATGGTTATGGGGATTAGCTTCAGGACTTGCTTATTTTTACATTGTATATATTATCTGGTTTGGAGAGGCAAAAGAATTGGCTACTTCTGCAGGTGGTGAAGTTCTTAAGGCACACAATATCCTTTGTAAATTCGTAGTTATT ILTVPLMCVEFYLILRAAGATKKLMWTLIAASTVMLVTGYWGEGVDRDNAWLWGLASGLAYFYIVYIIWFGEAKELATSAGGEVLKAHNILCKFVVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTTACTGTTCCATTAATGTGCGTTGAATTCTACTTAATTCTTAGAGCA---------GCT------GGTGCAACTAAA---AAATTA------------------------------------ATGTGGACA---CTTATTGCAGCATCTACAGTAATGTTAGTTACTGGATACTGGGGAGAA---------GGT------------------GTT------GATAGA------------------------------------------------------------------------------------------------GACAATGCA------------------TGGTTATGG---GGATTAGCTTCAGGACTTGCTTATTTTTACATTGTATATATTATC---------------TGG------TTT---GGAGAGGCAAAAGAATTGGCTACTTCT------GCA---GGTGGTGAA---GTT---CTT---AAG---GCA---CAC---AAT---ATCCTT---TGTAAATTCGTAGTTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILRA---A--GATK-KL------------MWT-LIAASTVMLVTGYWGE---G------V--DR--------------------------------DNA------WLW-GLASGLAYFYIVYII-----W--F-GEAKELATS--A-GGE-V-L-K-A-H-N-IL-CKFVVI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929307 [II-CFB-MS024] PRGD_OTU101_f0ecca86023a3549553d101dad37a7ae gb|KJ929307| PRGD_OTU101_f0ecca86023a3549553d101dad37a7ae, putative proteorhodopsin gene, partial cds. PRGD_OTU101_f0ecca86023a3549553d101dad37a7ae, putative proteorhodopsin gene, partial cds. KJ929307 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) ATACTTACTGTTCCTTTAATGTGTGTAGAATTTTACTTAATTCTTAGAGCAGCTGGTGCTACTAAAAAATTAATGTGGACACTTATCGCTGCATCTACAGTAATGTTAGTTACTGGATACTGGGGAGAGGGTGTTGATAGAGATAACGCATGGTTATGGGGATTAGCTTCAGGACTTGCTTATTTTTACATCGTATATCTTATCTGGTTTGGAGAAGCAAAAGCATTGGCTACTTCAGCAGGTGGAGAAGTACTTAAAGCGCACAATATTCTATGTAAATTCGTAGTTATT ILTVPLMCVEFYLILRAAGATKKLMWTLIAASTVMLVTGYWGEGVDRDNAWLWGLASGLAYFYIVYLIWFGEAKALATSAGGEVLKAHNILCKFVVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTTACTGTTCCTTTAATGTGTGTAGAATTTTACTTAATTCTTAGAGCA---------GCT------GGTGCTACTAAA---AAATTA------------------------------------ATGTGGACA---CTTATCGCTGCATCTACAGTAATGTTAGTTACTGGATACTGGGGAGAG---------GGT------------------GTT------GATAGA------------------------------------------------------------------------------------------------GATAACGCA------------------TGGTTATGG---GGATTAGCTTCAGGACTTGCTTATTTTTACATCGTATATCTTATC---------------TGG------TTT---GGAGAAGCAAAAGCATTGGCTACTTCA------GCA---GGTGGAGAA---GTA---CTT---AAA---GCG---CAC---AAT---ATTCTA---TGTAAATTCGTAGTTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILRA---A--GATK-KL------------MWT-LIAASTVMLVTGYWGE---G------V--DR--------------------------------DNA------WLW-GLASGLAYFYIVYLI-----W--F-GEAKALATS--A-GGE-V-L-K-A-H-N-IL-CKFVVI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929303 [II-CFB-MS024] PRGD_OTU101_3d5d85f592cfd75d1f0d5d01813af243 gb|KJ929303| PRGD_OTU101_3d5d85f592cfd75d1f0d5d01813af243, putative proteorhodopsin gene, partial cds. PRGD_OTU101_3d5d85f592cfd75d1f0d5d01813af243, putative proteorhodopsin gene, partial cds. KJ929303 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) ATACTAACTGTTCCATTAATGTGTGTTGAATTTTACTTAATCCTAAAAGCAGCAGGAGCTACTAAAAAATTAATGTGGACTCTAATTGGAGCATCTACAGTAATGTTAGTTACTGGATACTGGGGAGAAGGTGTAGATAGAGATAATGCATGGTTATGGGGATTAGCTTCAGGACTTGCTTATTTTTACATCGTGTATCTTATCTGGTTTGGAGAAGCAAAAGCATTGGCTACTTCAGCTGGTGGTGAGGTTCTGAAAGCACATAATATATTATGTAAATTTGTACTTATC ILTVPLMCVEFYLILKAAGATKKLMWTLIGASTVMLVTGYWGEGVDRDNAWLWGLASGLAYFYIVYLIWFGEAKALATSAGGEVLKAHNILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTAACTGTTCCATTAATGTGTGTTGAATTTTACTTAATCCTAAAAGCA---------GCA------GGAGCTACTAAA---AAATTA------------------------------------ATGTGGACT---CTAATTGGAGCATCTACAGTAATGTTAGTTACTGGATACTGGGGAGAA---------GGT------------------GTA------GATAGA------------------------------------------------------------------------------------------------GATAATGCA------------------TGGTTATGG---GGATTAGCTTCAGGACTTGCTTATTTTTACATCGTGTATCTTATC---------------TGG------TTT---GGAGAAGCAAAAGCATTGGCTACTTCA------GCT---GGTGGTGAG---GTT---CTG---AAA---GCA---CAT---AAT---ATATTA---TGTAAATTTGTACTTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATK-KL------------MWT-LIGASTVMLVTGYWGE---G------V--DR--------------------------------DNA------WLW-GLASGLAYFYIVYLI-----W--F-GEAKALATS--A-GGE-V-L-K-A-H-N-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929723 [II-CFB-MS024] PRGD_OTU213_bf7ecb194e5c0e79606a65b91f735ccd gb|KJ929723| PRGD_OTU213_bf7ecb194e5c0e79606a65b91f735ccd, putative proteorhodopsin gene, partial cds. PRGD_OTU213_bf7ecb194e5c0e79606a65b91f735ccd, putative proteorhodopsin gene, partial cds. KJ929723 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) ATACTTACTGTTCCATTAATGTGTGTTGAATTCTATTTAATACTAAAAGCAGCTGGAGCTACGAAGTCTCTGATGTGGAAAATGATTGGTTTGTCAACTGTAATGCTTGTTACTGGTTATATCGGTGAAGGTTTACACGCTAACGACGGTCAAGCTCAGATCTGGGGATTATTTTCTGGTATAGCTTACTTTTGGATAGTTTATGAAATCTGGATGGGTGGCGCATCTAAACTTGCTGCTGCTGCAGGTGGAGCTGTTCAATCTGCTCATAAAACCCTATGTAAGTTCGTTCTTATC ILTVPLMCVEFYLILKAAGATKSLMWKMIGLSTVMLVTGYIGEGLHANDGQAQIWGLFSGIAYFWIVYEIWMGGASKLAAAAGGAVQSAHKTLCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTTACTGTTCCATTAATGTGTGTTGAATTCTATTTAATACTAAAAGCA---------GCT------GGAGCTACGAAG---TCTCTG------------------------------------ATGTGGAAA---ATGATTGGTTTGTCAACTGTAATGCTTGTTACTGGTTATATCGGTGAA---------GGT------------------TTA------CACGCT---------------------------------------------------AACGAC---------------------------------------GGTCAAGCT------------------CAGATCTGG---GGATTATTTTCTGGTATAGCTTACTTTTGGATAGTTTATGAAATC---------------TGG------ATG---GGTGGCGCATCTAAACTTGCTGCTGCT------GCA---GGTGGAGCT---GTT---CAA---TCT---GCT---CAT---AAA---ACCCTA---TGTAAGTTCGTTCTTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATK-SL------------MWK-MIGLSTVMLVTGYIGE---G------L--HA-----------------ND-------------GQA------QIW-GLFSGIAYFWIVYEI-----W--M-GGASKLAAA--A-GGA-V-Q-S-A-H-K-TL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929722 [II-CFB-MS024] PRGD_OTU213_otuREP_cfd908f08e22a087ff989c9c38ade3ad gb|KJ929722| PRGD_OTU213_otuREP_cfd908f08e22a087ff989c9c38ade3ad, putative proteorhodopsin gene, partial cds. PRGD_OTU213_otuREP_cfd908f08e22a087ff989c9c38ade3ad, putative proteorhodopsin gene, partial cds. KJ929722 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) ATACTTACTGTTCCATTAATGTGTGTTGAATTCTATTTAATACTCAAAGCAGCTGGGGCTACGAAGTCTTTGATGTGGAAAATGATTGGTTTGTCAACTGTAATGCTTGTTACTGGTTATATCGGTGAAGGTTTACATGCAAACGACGGTCAAGCCCAAATCTGGGGGTTATTTTCTGGTATAGCTTACTTTTGGATAGTATATGAAATCTGGATGGGTGGCGCATCTAAACTTGCTGCTGCTGCAGGTGGAGCAGTTCAATCTGCTCACAAAACTCTATGTAAGTTCGTTCTTATC ILTVPLMCVEFYLILKAAGATKSLMWKMIGLSTVMLVTGYIGEGLHANDGQAQIWGLFSGIAYFWIVYEIWMGGASKLAAAAGGAVQSAHKTLCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTTACTGTTCCATTAATGTGTGTTGAATTCTATTTAATACTCAAAGCA---------GCT------GGGGCTACGAAG---TCTTTG------------------------------------ATGTGGAAA---ATGATTGGTTTGTCAACTGTAATGCTTGTTACTGGTTATATCGGTGAA---------GGT------------------TTA------CATGCA---------------------------------------------------AACGAC---------------------------------------GGTCAAGCC------------------CAAATCTGG---GGGTTATTTTCTGGTATAGCTTACTTTTGGATAGTATATGAAATC---------------TGG------ATG---GGTGGCGCATCTAAACTTGCTGCTGCT------GCA---GGTGGAGCA---GTT---CAA---TCT---GCT---CAC---AAA---ACTCTA---TGTAAGTTCGTTCTTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATK-SL------------MWK-MIGLSTVMLVTGYIGE---G------L--HA-----------------ND-------------GQA------QIW-GLFSGIAYFWIVYEI-----W--M-GGASKLAAA--A-GGA-V-Q-S-A-H-K-TL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929404 [II-CFB-MS024] PRGD_OTU118_5b538cffa25dc42379c4472a7c0a8924 gb|KJ929404| PRGD_OTU118_5b538cffa25dc42379c4472a7c0a8924, putative proteorhodopsin gene, partial cds. PRGD_OTU118_5b538cffa25dc42379c4472a7c0a8924, putative proteorhodopsin gene, partial cds. KJ929404 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTTTAACAGTTCCACTAATGTGTGTTGAATTTTATTTAATACTCAAAGTTGCTGGGGCCACGAAATCTTTAATGTGGAAAATGATTATACTTTCTATTGTGATGCTTGTCACTGGTTATTTCGGTGAATCAGGTATTGGACCTTTTGATGCTCAGATATGGGGTCTTATTTCTGGTATAGCATATGCTTTAATTGCACTCGAAATTTGGGTTGGTGGCGCTTCTAAACTTGCCAAAGCTGCAGGTGAAGATACCGCTTATGCTCACAAAGTATTATGCTGGTTCGTCCTTGTT ILTVPLMCVEFYLILKVAGATKSLMWKMIILSIVMLVTGYFGESGIGPFDAQIWGLISGIAYALIALEIWVGGASKLAKAAGEDTAYAHKVLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACAGTTCCACTAATGTGTGTTGAATTTTATTTAATACTCAAAGTT---------GCT------GGGGCCACGAAA---TCTTTA------------------------------------ATGTGGAAA---ATGATTATACTTTCTATTGTGATGCTTGTCACTGGTTATTTCGGTGAA---------TCA------------GGT---ATT------GGACCT------------------------------------------------------------------------------------------------TTTGATGCT------------------CAGATATGG---GGTCTTATTTCTGGTATAGCATATGCTTTAATTGCACTCGAAATT---------------TGG------GTT---GGTGGCGCTTCTAAACTTGCCAAAGCT------GCA---GGTGAAGAT---ACC---GCT---TAT---GCT---CAC---AAA---GTATTA---TGCTGGTTCGTCCTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-SL------------MWK-MIILSIVMLVTGYFGE---S----G-I--GP--------------------------------FDA------QIW-GLISGIAYALIALEI-----W--V-GGASKLAKA--A-GED-T-A-Y-A-H-K-VL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929405 [II-CFB-MS024] PRGD_OTU118_9c54c0eac519e338e1a974bb06b56a06 gb|KJ929405| PRGD_OTU118_9c54c0eac519e338e1a974bb06b56a06, putative proteorhodopsin gene, partial cds. PRGD_OTU118_9c54c0eac519e338e1a974bb06b56a06, putative proteorhodopsin gene, partial cds. KJ929405 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683), Indian Ocean (-33.28, 45.35) ATTTTAACAGTTCCACTAATGTGTGTTGAATTTTATTTAATACTCAAAGTTGCTGGGGCCACAAAATCTTTAATGTGGAAAATGATTATACTCTCTATCGTGATGCTTGTCACTGGTTATTTCGGTGAATCAGGTATTGGACCTTTTGATGCTCAGATATGGGGTCTTATTTCTGGTATAGCATATGCTTTAATTGCACTCGAGATTTGGGTTGGAGGCGCTTCTAAACTTGCCAAAGCTGCAGGTGAAGATACCGCTTATGCTCACAAAGTATTGTGCTGGTTCGTCCTTGTT ILTVPLMCVEFYLILKVAGATKSLMWKMIILSIVMLVTGYFGESGIGPFDAQIWGLISGIAYALIALEIWVGGASKLAKAAGEDTAYAHKVLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACAGTTCCACTAATGTGTGTTGAATTTTATTTAATACTCAAAGTT---------GCT------GGGGCCACAAAA---TCTTTA------------------------------------ATGTGGAAA---ATGATTATACTCTCTATCGTGATGCTTGTCACTGGTTATTTCGGTGAA---------TCA------------GGT---ATT------GGACCT------------------------------------------------------------------------------------------------TTTGATGCT------------------CAGATATGG---GGTCTTATTTCTGGTATAGCATATGCTTTAATTGCACTCGAGATT---------------TGG------GTT---GGAGGCGCTTCTAAACTTGCCAAAGCT------GCA---GGTGAAGAT---ACC---GCT---TAT---GCT---CAC---AAA---GTATTG---TGCTGGTTCGTCCTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-SL------------MWK-MIILSIVMLVTGYFGE---S----G-I--GP--------------------------------FDA------QIW-GLISGIAYALIALEI-----W--V-GGASKLAKA--A-GED-T-A-Y-A-H-K-VL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929403 [II-CFB-MS024] PRGD_OTU118_4964711f4999ad2af33260574aeb5b0a gb|KJ929403| PRGD_OTU118_4964711f4999ad2af33260574aeb5b0a, putative proteorhodopsin gene, partial cds. PRGD_OTU118_4964711f4999ad2af33260574aeb5b0a, putative proteorhodopsin gene, partial cds. KJ929403 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTTTAACAGTTCCATTAATGTGTGTTGAATTTTATTTAATACTCAAAGTTGCTGGGGCCACAAAATCTTTAATGTGGAAAATGATTATACTTTCTATTGTGATGCTTGTTACTGGTTATTTCGGTGAATCAGGTATTGGACCTTTTGATGCTCAGATATGGGGTCTTATTTCTGGTATAGCATATGCTTTAATTGCACTCGAAATTTGGGTTGGAGGCGCTTCTAAACTTGCCAAAGCTGCAGGTGATGATACCGCTTATGCTCACAAAGTATTATGCTGGTTCGTCCTTGTT ILTVPLMCVEFYLILKVAGATKSLMWKMIILSIVMLVTGYFGESGIGPFDAQIWGLISGIAYALIALEIWVGGASKLAKAAGDDTAYAHKVLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACAGTTCCATTAATGTGTGTTGAATTTTATTTAATACTCAAAGTT---------GCT------GGGGCCACAAAA---TCTTTA------------------------------------ATGTGGAAA---ATGATTATACTTTCTATTGTGATGCTTGTTACTGGTTATTTCGGTGAA---------TCA------------GGT---ATT------GGACCT------------------------------------------------------------------------------------------------TTTGATGCT------------------CAGATATGG---GGTCTTATTTCTGGTATAGCATATGCTTTAATTGCACTCGAAATT---------------TGG------GTT---GGAGGCGCTTCTAAACTTGCCAAAGCT------GCA---GGTGATGAT---ACC---GCT---TAT---GCT---CAC---AAA---GTATTA---TGCTGGTTCGTCCTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-SL------------MWK-MIILSIVMLVTGYFGE---S----G-I--GP--------------------------------FDA------QIW-GLISGIAYALIALEI-----W--V-GGASKLAKA--A-GDD-T-A-Y-A-H-K-VL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929402 [II-CFB-MS024] PRGD_OTU118_otuREP_6e72f147ad23383375886970eab4baaf gb|KJ929402| PRGD_OTU118_otuREP_6e72f147ad23383375886970eab4baaf, putative proteorhodopsin gene, partial cds. PRGD_OTU118_otuREP_6e72f147ad23383375886970eab4baaf, putative proteorhodopsin gene, partial cds. KJ929402 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-33.28, 45.35) ATTTTAACTGTTCCATTAATGTGTGTTGAATTTTATTTAATACTCAAAGTTGCTGGGGCCACGAAATCTTTAATGTGGAAAATGATTATACTTTCTATTGTGATGCTTGTCACTGGTTATTTCGGTGAATCAGGTATTGGACCTTTTGATGCTCAGATATGGGGTCTTATTTCTGGTATAGCATATGCTTTAATTGCACTTGAAATTTGGGTTGGAGGCGCTTCTAAACTTGCCAAAGCTGCAGGTGAAGATACCGCTTATGCTCACAAAGTATTATGCTGGTTCGTCCTTGTT ILTVPLMCVEFYLILKVAGATKSLMWKMIILSIVMLVTGYFGESGIGPFDAQIWGLISGIAYALIALEIWVGGASKLAKAAGEDTAYAHKVLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACTGTTCCATTAATGTGTGTTGAATTTTATTTAATACTCAAAGTT---------GCT------GGGGCCACGAAA---TCTTTA------------------------------------ATGTGGAAA---ATGATTATACTTTCTATTGTGATGCTTGTCACTGGTTATTTCGGTGAA---------TCA------------GGT---ATT------GGACCT------------------------------------------------------------------------------------------------TTTGATGCT------------------CAGATATGG---GGTCTTATTTCTGGTATAGCATATGCTTTAATTGCACTTGAAATT---------------TGG------GTT---GGAGGCGCTTCTAAACTTGCCAAAGCT------GCA---GGTGAAGAT---ACC---GCT---TAT---GCT---CAC---AAA---GTATTA---TGCTGGTTCGTCCTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-SL------------MWK-MIILSIVMLVTGYFGE---S----G-I--GP--------------------------------FDA------QIW-GLISGIAYALIALEI-----W--V-GGASKLAKA--A-GED-T-A-Y-A-H-K-VL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929406 [II-CFB-MS024] PRGD_OTU118_e1bae045ff4653f62c9483bd182e27fd gb|KJ929406| PRGD_OTU118_e1bae045ff4653f62c9483bd182e27fd, putative proteorhodopsin gene, partial cds. PRGD_OTU118_e1bae045ff4653f62c9483bd182e27fd, putative proteorhodopsin gene, partial cds. KJ929406 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTTTAACAGTTCCATTAATGTGTGTTGAATTTTATTTAATACTCAAAGTTGCTGGGGCCACGAAATCTTTGATGTGGAAAATGATTATACTTTCTATTGTGATGCTTGTCACTGGTTATTTCGGTGAATCAGGTATTGGACCTTTTGATGCTCAAATATGGGGTCTTATTTCTGGTATAGCATACGCTTTAATTGCACTCGAAATTTGGGTTGGAGGAGCTTCTAAACTTGCTAAAGCTGCAGGTGATGATACAGCCTATGCTCACAAAGTATTATGCTGGTTCGTCCTTGTT ILTVPLMCVEFYLILKVAGATKSLMWKMIILSIVMLVTGYFGESGIGPFDAQIWGLISGIAYALIALEIWVGGASKLAKAAGDDTAYAHKVLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACAGTTCCATTAATGTGTGTTGAATTTTATTTAATACTCAAAGTT---------GCT------GGGGCCACGAAA---TCTTTG------------------------------------ATGTGGAAA---ATGATTATACTTTCTATTGTGATGCTTGTCACTGGTTATTTCGGTGAA---------TCA------------GGT---ATT------GGACCT------------------------------------------------------------------------------------------------TTTGATGCT------------------CAAATATGG---GGTCTTATTTCTGGTATAGCATACGCTTTAATTGCACTCGAAATT---------------TGG------GTT---GGAGGAGCTTCTAAACTTGCTAAAGCT------GCA---GGTGATGAT---ACA---GCC---TAT---GCT---CAC---AAA---GTATTA---TGCTGGTTCGTCCTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-SL------------MWK-MIILSIVMLVTGYFGE---S----G-I--GP--------------------------------FDA------QIW-GLISGIAYALIALEI-----W--V-GGASKLAKA--A-GDD-T-A-Y-A-H-K-VL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929542 [II-CFB-MS024] PRGD_OTU149a_otuREP_9e434e3d631d629f6d38d13d79d5ae99 gb|KJ929542| PRGD_OTU149a_otuREP_9e434e3d631d629f6d38d13d79d5ae99, putative proteorhodopsin gene, partial cds. PRGD_OTU149a_otuREP_9e434e3d631d629f6d38d13d79d5ae99, putative proteorhodopsin gene, partial cds. KJ929542 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Bering strait marine 67.49 -168.12 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; ; 67.49, -168.12) ATTCTTACAGTACCATTAATGTGTGTTGAATTTTACTTGATACTAAAAGTAGCAGGTGCAAAAAAATCAATGTTATGGAAATTGATTTTACTTTCAGTAGTAATGCTTGTAACAGGATACATTGGAGAAGTTTCAGATGCAGATAATGCTCAAATATGGGGATTAGTTTCTGGTGTTGCTTACTTCGCTATTGTATATGAAATATGGTTAGGTGGTGCAGCTAAATTAGCTAAAGAAGCAGGTGGTTCAATACATCGTGCTCACAAAATACTTTGTTGGTTCGTATTAGTT ILTVPLMCVEFYLILKVAGAKKSMLWKLILLSVVMLVTGYIGEVSDADNAQIWGLVSGVAYFAIVYEIWLGGAAKLAKEAGGSIHRAHKILCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTACAGTACCATTAATGTGTGTTGAATTTTACTTGATACTAAAAGTA---------GCA------GGTGCAAAAAAA---TCAATG------------------------------------TTATGGAAA---TTGATTTTACTTTCAGTAGTAATGCTTGTAACAGGATACATTGGAGAA---------GTT------------------TCA------GATGCA------------------------------------------------------------------------------------------------GATAATGCT------------------CAAATATGG---GGATTAGTTTCTGGTGTTGCTTACTTCGCTATTGTATATGAAATA---------------TGG------TTA---GGTGGTGCAGCTAAATTAGCTAAAGAA------GCA---GGTGGTTCA---ATA---CAT---CGT---GCT---CAC---AAA---ATACTT---TGTTGGTTCGTATTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GAKK-SM------------LWK-LILLSVVMLVTGYIGE---V------S--DA--------------------------------DNA------QIW-GLVSGVAYFAIVYEI-----W--L-GGAAKLAKE--A-GGS-I-H-R-A-H-K-IL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929543 [II-CFB-MS024] PRGD_OTU149a_b270880a57972c6690255c3e47e1e78d gb|KJ929543| PRGD_OTU149a_b270880a57972c6690255c3e47e1e78d, putative proteorhodopsin gene, partial cds. PRGD_OTU149a_b270880a57972c6690255c3e47e1e78d, putative proteorhodopsin gene, partial cds. KJ929543 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833) ATTCTTACAGTACCATTAATGTGTGTTGAATTTTATTTAATACTAAAAGTAGCAGGTGCAAAAAAATCCATGTTATGGAAAATGATCTTACTTTCAGTTGTAATGCTTGTAACAGGATACATTGGAGAAGTTTCAGATTCAGATAATGCTCAAATATGGGGATTAGTTTCTGGTGTTGCTTATTTCGCTATCGTATATGAAATATGGTTAGGTGGTGCAGCTAAATTAGCTAAAGAAGCAGGTGGTTCAATACAAAGTGCTCACAAAGTACTATGTTGGTTCGTACTAGTA ILTVPLMCVEFYLILKVAGAKKSMLWKMILLSVVMLVTGYIGEVSDSDNAQIWGLVSGVAYFAIVYEIWLGGAAKLAKEAGGSIQSAHKVLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTACAGTACCATTAATGTGTGTTGAATTTTATTTAATACTAAAAGTA---------GCA------GGTGCAAAAAAA---TCCATG------------------------------------TTATGGAAA---ATGATCTTACTTTCAGTTGTAATGCTTGTAACAGGATACATTGGAGAA---------GTT------------------TCA------GATTCA------------------------------------------------------------------------------------------------GATAATGCT------------------CAAATATGG---GGATTAGTTTCTGGTGTTGCTTATTTCGCTATCGTATATGAAATA---------------TGG------TTA---GGTGGTGCAGCTAAATTAGCTAAAGAA------GCA---GGTGGTTCA---ATA---CAA---AGT---GCT---CAC---AAA---GTACTA---TGTTGGTTCGTACTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GAKK-SM------------LWK-MILLSVVMLVTGYIGE---V------S--DS--------------------------------DNA------QIW-GLVSGVAYFAIVYEI-----W--L-GGAAKLAKE--A-GGS-I-Q-S-A-H-K-VL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929694 [II-CFB-MS024] PRGD_OTU199_otuREP_977382fef8069e7afed05734df6f2780 gb|KJ929694| PRGD_OTU199_otuREP_977382fef8069e7afed05734df6f2780, putative proteorhodopsin gene, partial cds. PRGD_OTU199_otuREP_977382fef8069e7afed05734df6f2780, putative proteorhodopsin gene, partial cds. KJ929694 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683) ATTCTTACAGTTCCATTAATGTGTGTAGAATTCTATTTAATCTTAAAAGCTGCAGGTGCTAAAAAATCCTTGATGTGGAGAATGATCTTTTTCTCTGTAATCATGTTAGTAACAGGATATATTGGAGAAGCAGTAAATAGAGATATGGCTCAAATATGGGGACTAATCTCAGGATTGGCTTACTTTGCTATAGTCTATGATATTTGGTTTGGTGAAGCTAAAAAGTTAGCAGAAGCAGCAGGTGGTGCAGTCTTAAGTGCGCACAAAACATTATGCTGGTTTGTACTTGTA ILTVPLMCVEFYLILKAAGAKKSLMWRMIFFSVIMLVTGYIGEAVNRDMAQIWGLISGLAYFAIVYDIWFGEAKKLAEAAGGAVLSAHKTLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTACAGTTCCATTAATGTGTGTAGAATTCTATTTAATCTTAAAAGCT---------GCA------GGTGCTAAAAAA---TCCTTG------------------------------------ATGTGGAGA---ATGATCTTTTTCTCTGTAATCATGTTAGTAACAGGATATATTGGAGAA---------GCA------------------GTA------AATAGA------------------------------------------------------------------------------------------------GATATGGCT------------------CAAATATGG---GGACTAATCTCAGGATTGGCTTACTTTGCTATAGTCTATGATATT---------------TGG------TTT---GGTGAAGCTAAAAAGTTAGCAGAAGCA------GCA---GGTGGTGCA---GTC---TTA---AGT---GCG---CAC---AAA---ACATTA---TGCTGGTTTGTACTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GAKK-SL------------MWR-MIFFSVIMLVTGYIGE---A------V--NR--------------------------------DMA------QIW-GLISGLAYFAIVYDI-----W--F-GEAKKLAEA--A-GGA-V-L-S-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-MS024]_KJ929695 [II-CFB-MS024] PRGD_OTU199_8ca04360c4c870a199a54266e0ec3c18 gb|KJ929695| PRGD_OTU199_8ca04360c4c870a199a54266e0ec3c18, putative proteorhodopsin gene, partial cds. PRGD_OTU199_8ca04360c4c870a199a54266e0ec3c18, putative proteorhodopsin gene, partial cds. KJ929695 [[proteorhodopsin super-cluster II/CFB-like cluster/MS024_2A MS024_3C Flavobacterial-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster MS024_2A MS024_3C Flavobacterial-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Bering strait marine 67.49 -168.12 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) ATTCTTACTGTTCCATTAATGTGTGTAGAATTCTATTTAATTTTAAAAGCTGCAGGAGCTAAGAAGTCTTTGATGTGGAGAATGATCTTTTTCTCTGTAGTTATGTTAGTAACAGGATATATTGGAGAGGCTGTAAACAGAGAAATGGCTCAAATATGGGGTCTAATTTCAGGATTGGCTTACTTTGCCATTGTTTATGACATCTGGTTTGGTGAAGCTAAAAAATTAGCAGAAGCTGCTGGTGGCGCTGTTTTAAGCGCTCACAAAACCTTATGCTGGTTTGTACTTGTA ILTVPLMCVEFYLILKAAGAKKSLMWRMIFFSVVMLVTGYIGEAVNREMAQIWGLISGLAYFAIVYDIWFGEAKKLAEAAGGAVLSAHKTLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTACTGTTCCATTAATGTGTGTAGAATTCTATTTAATTTTAAAAGCT---------GCA------GGAGCTAAGAAG---TCTTTG------------------------------------ATGTGGAGA---ATGATCTTTTTCTCTGTAGTTATGTTAGTAACAGGATATATTGGAGAG---------GCT------------------GTA------AACAGA------------------------------------------------------------------------------------------------GAAATGGCT------------------CAAATATGG---GGTCTAATTTCAGGATTGGCTTACTTTGCCATTGTTTATGACATC---------------TGG------TTT---GGTGAAGCTAAAAAATTAGCAGAAGCT------GCT---GGTGGCGCT---GTT---TTA---AGC---GCT---CAC---AAA---ACCTTA---TGCTGGTTTGTACTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GAKK-SL------------MWR-MIFFSVVMLVTGYIGE---A------V--NR--------------------------------EMA------QIW-GLISGLAYFAIVYDI-----W--F-GEAKKLAEA--A-GGA-V-L-S-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ928297 [II-CFB-Dokdonia] PRGD_OTU031_05718bc679df4bba476d3e94eb77074e gb|KJ928297| PRGD_OTU031_05718bc679df4bba476d3e94eb77074e, putative proteorhodopsin gene, partial cds. PRGD_OTU031_05718bc679df4bba476d3e94eb77074e, putative proteorhodopsin gene, partial cds. KJ928297 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) ACGCTCACAGTACCCCTGATGTGCGTCGAATTCTACCTCATCTTGAAAGCTGCTGGAGCCAAGACTGACCTCCTTTGGAAATTGATTGGTGCATCAGTCGTGATGTTGGTGACAGGATACTTTGGTGAGGCGGTTTACCGTGACTCTGCGTGGTTGTGGGGCTTGTTCTCAGGAATAGCTTACTTCTACATTGTTTATCTCATCTTCGCTGGTGAAGCGAAGCAACTCGCCAACGCGTCAACACCAGCAGTTCAAAACGCACACAACATCTTGTGCAAGTTCGTTCTGATT TLTVPLMCVEFYLILKAAGAKTDLLWKLIGASVVMLVTGYFGEAVYRDSAWLWGLFSGIAYFYIVYLIFAGEAKQLANASTPAVQNAHNILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCTCACAGTACCCCTGATGTGCGTCGAATTCTACCTCATCTTGAAAGCT---------GCT------GGAGCCAAGACT---GACCTC------------------------------------CTTTGGAAA---TTGATTGGTGCATCAGTCGTGATGTTGGTGACAGGATACTTTGGTGAG---------GCG------------------GTT------TACCGT------------------------------------------------------------------------------------------------GACTCTGCG------------------TGGTTGTGG---GGCTTGTTCTCAGGAATAGCTTACTTCTACATTGTTTATCTCATC---------------TTC------GCT---GGTGAAGCGAAGCAACTCGCCAACGCG------TCA---ACACCAGCA---GTT---CAA---AAC---GCA---CAC---AAC---ATCTTG---TGCAAGTTCGTTCTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLILKA---A--GAKT-DL------------LWK-LIGASVVMLVTGYFGE---A------V--YR--------------------------------DSA------WLW-GLFSGIAYFYIVYLI-----F--A-GEAKQLANA--S-TPA-V-Q-N-A-H-N-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ928306 [II-CFB-Dokdonia] PRGD_OTU031_5a234d9b3793116ca0fb803b2c56fc82 gb|KJ928306| PRGD_OTU031_5a234d9b3793116ca0fb803b2c56fc82, putative proteorhodopsin gene, partial cds. PRGD_OTU031_5a234d9b3793116ca0fb803b2c56fc82, putative proteorhodopsin gene, partial cds. KJ928306 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ACTTTGACTGTTCCGCTGATGTGCGTGGAATTCTACCTCATCTTGAAAGCCGCTGGAGCCAAGACTGACCTTCTTTGGAAACTGATCGGTGCATCAGTCGTCATGTTGGTGGCAGGATACTTTGGTGAGGCGGTTTACCGTGACTCTGCGTGGTTGTGGGGCTTGTTCTCAGGAATAGCTTACTTCTACATTGTTTATCTCATCTTCGCTGGTGAAGCGAAGCAACTCGCCAACGCGTCAACACCAGCAGTTCAAAACGCACACAACATCTTGTGCAAGTTCGTTCTGATT TLTVPLMCVEFYLILKAAGAKTDLLWKLIGASVVMLVAGYFGEAVYRDSAWLWGLFSGIAYFYIVYLIFAGEAKQLANASTPAVQNAHNILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTTGACTGTTCCGCTGATGTGCGTGGAATTCTACCTCATCTTGAAAGCC---------GCT------GGAGCCAAGACT---GACCTT------------------------------------CTTTGGAAA---CTGATCGGTGCATCAGTCGTCATGTTGGTGGCAGGATACTTTGGTGAG---------GCG------------------GTT------TACCGT------------------------------------------------------------------------------------------------GACTCTGCG------------------TGGTTGTGG---GGCTTGTTCTCAGGAATAGCTTACTTCTACATTGTTTATCTCATC---------------TTC------GCT---GGTGAAGCGAAGCAACTCGCCAACGCG------TCA---ACACCAGCA---GTT---CAA---AAC---GCA---CAC---AAC---ATCTTG---TGCAAGTTCGTTCTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLILKA---A--GAKT-DL------------LWK-LIGASVVMLVAGYFGE---A------V--YR--------------------------------DSA------WLW-GLFSGIAYFYIVYLI-----F--A-GEAKQLANA--S-TPA-V-Q-N-A-H-N-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ928303 [II-CFB-Dokdonia] PRGD_OTU031_31faa65aca50b93cd52547dba495bc9b gb|KJ928303| PRGD_OTU031_31faa65aca50b93cd52547dba495bc9b, putative proteorhodopsin gene, partial cds. PRGD_OTU031_31faa65aca50b93cd52547dba495bc9b, putative proteorhodopsin gene, partial cds. KJ928303 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), English Channel (48.7717, -3.9683) ACGCTCACAGTACCCCTGATGTGTGTCGAGTTCTACCTCATCTTGAAAGCTGCTGGAGCCAAGACTGACCTCCTTTGGAAATTGATTGGTGCATCAGTTGTAATGTTGGTGACAGGATACTTCGGTGAGGCGGTTTACCGTGACTCTGCGTGGTTGTGGGGCTTGTTCTCAGGAATAGCTTACTTCTACATCGTTTATCTCATCTTCGCTGGTGAAGCGAAGCAACTCGCCAACGCGTCAACACCAGCAGTTCAAAACGCACACAACATCTTGTGCAAGTTCGTTCTGATT TLTVPLMCVEFYLILKAAGAKTDLLWKLIGASVVMLVTGYFGEAVYRDSAWLWGLFSGIAYFYIVYLIFAGEAKQLANASTPAVQNAHNILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCTCACAGTACCCCTGATGTGTGTCGAGTTCTACCTCATCTTGAAAGCT---------GCT------GGAGCCAAGACT---GACCTC------------------------------------CTTTGGAAA---TTGATTGGTGCATCAGTTGTAATGTTGGTGACAGGATACTTCGGTGAG---------GCG------------------GTT------TACCGT------------------------------------------------------------------------------------------------GACTCTGCG------------------TGGTTGTGG---GGCTTGTTCTCAGGAATAGCTTACTTCTACATCGTTTATCTCATC---------------TTC------GCT---GGTGAAGCGAAGCAACTCGCCAACGCG------TCA---ACACCAGCA---GTT---CAA---AAC---GCA---CAC---AAC---ATCTTG---TGCAAGTTCGTTCTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLILKA---A--GAKT-DL------------LWK-LIGASVVMLVTGYFGE---A------V--YR--------------------------------DSA------WLW-GLFSGIAYFYIVYLI-----F--A-GEAKQLANA--S-TPA-V-Q-N-A-H-N-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ928304 [II-CFB-Dokdonia] PRGD_OTU031_56ee7e27a788851342225a7bd596ea91 gb|KJ928304| PRGD_OTU031_56ee7e27a788851342225a7bd596ea91, putative proteorhodopsin gene, partial cds. PRGD_OTU031_56ee7e27a788851342225a7bd596ea91, putative proteorhodopsin gene, partial cds. KJ928304 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) ACGCTCACAGTACCCCTGATGTGCGTCGAATTCTACCTCATCTTGAAAGCTGCTGGAGCCAAGACTGACCTCCTTTGGAAATTGATTGGTGCATCAGTTGTAATGTTGGTGACAGGATACTTTGGTGAGGCGGTTTACCGTGACTCTGCGTGGTTGTGGGGCTTGTTCTCAGGAATAGCTTACTTCTACATCGTTTATCTCATCTTCGCTGGTGAAGCGAAGCAACTCGCCAACGCGTCAACACCAGCAGTTCAAAACGCACACAACATCTTGTGCAAGTTCGTTCTGATT TLTVPLMCVEFYLILKAAGAKTDLLWKLIGASVVMLVTGYFGEAVYRDSAWLWGLFSGIAYFYIVYLIFAGEAKQLANASTPAVQNAHNILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCTCACAGTACCCCTGATGTGCGTCGAATTCTACCTCATCTTGAAAGCT---------GCT------GGAGCCAAGACT---GACCTC------------------------------------CTTTGGAAA---TTGATTGGTGCATCAGTTGTAATGTTGGTGACAGGATACTTTGGTGAG---------GCG------------------GTT------TACCGT------------------------------------------------------------------------------------------------GACTCTGCG------------------TGGTTGTGG---GGCTTGTTCTCAGGAATAGCTTACTTCTACATCGTTTATCTCATC---------------TTC------GCT---GGTGAAGCGAAGCAACTCGCCAACGCG------TCA---ACACCAGCA---GTT---CAA---AAC---GCA---CAC---AAC---ATCTTG---TGCAAGTTCGTTCTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLILKA---A--GAKT-DL------------LWK-LIGASVVMLVTGYFGE---A------V--YR--------------------------------DSA------WLW-GLFSGIAYFYIVYLI-----F--A-GEAKQLANA--S-TPA-V-Q-N-A-H-N-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ928308 [II-CFB-Dokdonia] PRGD_OTU031_6367e614a7804d2689ef0302164d9122 gb|KJ928308| PRGD_OTU031_6367e614a7804d2689ef0302164d9122, putative proteorhodopsin gene, partial cds. PRGD_OTU031_6367e614a7804d2689ef0302164d9122, putative proteorhodopsin gene, partial cds. KJ928308 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937) ACGCTCACAGTACCCCTGATGTGCGTCGAATTCTACCTCATCTTGAAAGCTGCTGGTGCCAAGACTGACCTCCTTTGGAAATTGATTGGTGCATCAGTCGTGATGTTGGTGACAGGATACTTTGGTGAGGCGGTTTACCGCGATTCTGCGTGGTTGTGGGGCTTGTTCTCAGGAATAGCTTACTTCTACATCGTTTATCTCATCTTCGCAGGTGAAGCTAAGCAACTCGCCAACGCGTCAACACCAGCAGTCCAAAACGCACACAACATCTTGTGTAAGTTCGTTCTGATT TLTVPLMCVEFYLILKAAGAKTDLLWKLIGASVVMLVTGYFGEAVYRDSAWLWGLFSGIAYFYIVYLIFAGEAKQLANASTPAVQNAHNILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCTCACAGTACCCCTGATGTGCGTCGAATTCTACCTCATCTTGAAAGCT---------GCT------GGTGCCAAGACT---GACCTC------------------------------------CTTTGGAAA---TTGATTGGTGCATCAGTCGTGATGTTGGTGACAGGATACTTTGGTGAG---------GCG------------------GTT------TACCGC------------------------------------------------------------------------------------------------GATTCTGCG------------------TGGTTGTGG---GGCTTGTTCTCAGGAATAGCTTACTTCTACATCGTTTATCTCATC---------------TTC------GCA---GGTGAAGCTAAGCAACTCGCCAACGCG------TCA---ACACCAGCA---GTC---CAA---AAC---GCA---CAC---AAC---ATCTTG---TGTAAGTTCGTTCTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLILKA---A--GAKT-DL------------LWK-LIGASVVMLVTGYFGE---A------V--YR--------------------------------DSA------WLW-GLFSGIAYFYIVYLI-----F--A-GEAKQLANA--S-TPA-V-Q-N-A-H-N-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ928311 [II-CFB-Dokdonia] PRGD_OTU031_7ef5150c49bb86834cc39092111ba1fe gb|KJ928311| PRGD_OTU031_7ef5150c49bb86834cc39092111ba1fe, putative proteorhodopsin gene, partial cds. PRGD_OTU031_7ef5150c49bb86834cc39092111ba1fe, putative proteorhodopsin gene, partial cds. KJ928311 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ACTTTGACTGTTCCGCTGATGTGCGTGGAATTCTACCTCATTCTAAAAGCCGCTGGAGCCAAGACCGACCTTCTTTGGAAACTGATCGGTGCATCAGTCGTCATGTTGGTGACGGGATACTTTGGTGAGGCGGTTTACCGTGATTCTGCGTGGTTGTGGGGCTTGTTCTCAGGAATAGCTTACTTCTACATCGTTTATCTCATTTTCGCTGGTGAAGCTAAACAACTCGCCAACGCATCTTCACCTGCAGTCCAGAAAGCCCACAACATCTTGTGCAAGTTTGTCCTGATT TLTVPLMCVEFYLILKAAGAKTDLLWKLIGASVVMLVTGYFGEAVYRDSAWLWGLFSGIAYFYIVYLIFAGEAKQLANASSPAVQKAHNILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTTGACTGTTCCGCTGATGTGCGTGGAATTCTACCTCATTCTAAAAGCC---------GCT------GGAGCCAAGACC---GACCTT------------------------------------CTTTGGAAA---CTGATCGGTGCATCAGTCGTCATGTTGGTGACGGGATACTTTGGTGAG---------GCG------------------GTT------TACCGT------------------------------------------------------------------------------------------------GATTCTGCG------------------TGGTTGTGG---GGCTTGTTCTCAGGAATAGCTTACTTCTACATCGTTTATCTCATT---------------TTC------GCT---GGTGAAGCTAAACAACTCGCCAACGCA------TCT---TCACCTGCA---GTC---CAG---AAA---GCC---CAC---AAC---ATCTTG---TGCAAGTTTGTCCTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLILKA---A--GAKT-DL------------LWK-LIGASVVMLVTGYFGE---A------V--YR--------------------------------DSA------WLW-GLFSGIAYFYIVYLI-----F--A-GEAKQLANA--S-SPA-V-Q-K-A-H-N-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ928322 [II-CFB-Dokdonia] PRGD_OTU031_f796a7f62931bf995dc23864054ab820 gb|KJ928322| PRGD_OTU031_f796a7f62931bf995dc23864054ab820, putative proteorhodopsin gene, partial cds. PRGD_OTU031_f796a7f62931bf995dc23864054ab820, putative proteorhodopsin gene, partial cds. KJ928322 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ACTTTGACTGTTCCGCTGATGTGCGTGGAATTCTACCTCATCTTGAAAGCCGCTGGAGCCAAGACTGACCTTCTTTGGAAACTGATCGGTGCATCAGTCGTCATGTTGGTGGCAGGATACTTTGGTGAGGCGGTTTACCGTGACTCTGCGTGGTTGTGGGGCTTGTTCTCAGGAATAGCTTACTTCTACATCGTTTATCTCATTTTCGCTGGTGAAGCAAAACAACTCGCCAACGCATCTTCACCTGCAGTCCAGAAAGCCCACAACATCTTGTGCAAGTTTGTCCTGATT TLTVPLMCVEFYLILKAAGAKTDLLWKLIGASVVMLVAGYFGEAVYRDSAWLWGLFSGIAYFYIVYLIFAGEAKQLANASSPAVQKAHNILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTTGACTGTTCCGCTGATGTGCGTGGAATTCTACCTCATCTTGAAAGCC---------GCT------GGAGCCAAGACT---GACCTT------------------------------------CTTTGGAAA---CTGATCGGTGCATCAGTCGTCATGTTGGTGGCAGGATACTTTGGTGAG---------GCG------------------GTT------TACCGT------------------------------------------------------------------------------------------------GACTCTGCG------------------TGGTTGTGG---GGCTTGTTCTCAGGAATAGCTTACTTCTACATCGTTTATCTCATT---------------TTC------GCT---GGTGAAGCAAAACAACTCGCCAACGCA------TCT---TCACCTGCA---GTC---CAG---AAA---GCC---CAC---AAC---ATCTTG---TGCAAGTTTGTCCTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLILKA---A--GAKT-DL------------LWK-LIGASVVMLVAGYFGE---A------V--YR--------------------------------DSA------WLW-GLFSGIAYFYIVYLI-----F--A-GEAKQLANA--S-SPA-V-Q-K-A-H-N-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ928318 [II-CFB-Dokdonia] PRGD_OTU031_ca0102d598ae8612f98499b7e591812a gb|KJ928318| PRGD_OTU031_ca0102d598ae8612f98499b7e591812a, putative proteorhodopsin gene, partial cds. PRGD_OTU031_ca0102d598ae8612f98499b7e591812a, putative proteorhodopsin gene, partial cds. KJ928318 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) ACGCTTACTGTGCCACTAATGTGCGTCGAATTCTACCTCATTTTGAAAGCTGCAGGAGCGAAAACCGATCTGCTTTGGAAATTGATTGGCGCTTCAGTCGTAATGCTTGTGACTGGTTACTGGGGTGAAGCTGTGGCCCGCGACCAAGCTTGGCTCTGGGGATTGTTCTCAGGAATGGCTTACTTCTACATTGTCTATCTCATTTTCGCTGGTGAAGCAAAACAACTCGCCAACGCATCAACTCCTGCGGTCCAGAAAGCGCACAACATCTTGTGCAAGTTTGTCCTGATT TLTVPLMCVEFYLILKAAGAKTDLLWKLIGASVVMLVTGYWGEAVARDQAWLWGLFSGMAYFYIVYLIFAGEAKQLANASTPAVQKAHNILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCTTACTGTGCCACTAATGTGCGTCGAATTCTACCTCATTTTGAAAGCT---------GCA------GGAGCGAAAACC---GATCTG------------------------------------CTTTGGAAA---TTGATTGGCGCTTCAGTCGTAATGCTTGTGACTGGTTACTGGGGTGAA---------GCT------------------GTG------GCCCGC------------------------------------------------------------------------------------------------GACCAAGCT------------------TGGCTCTGG---GGATTGTTCTCAGGAATGGCTTACTTCTACATTGTCTATCTCATT---------------TTC------GCT---GGTGAAGCAAAACAACTCGCCAACGCA------TCA---ACTCCTGCG---GTC---CAG---AAA---GCG---CAC---AAC---ATCTTG---TGCAAGTTTGTCCTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLILKA---A--GAKT-DL------------LWK-LIGASVVMLVTGYWGE---A------V--AR--------------------------------DQA------WLW-GLFSGMAYFYIVYLI-----F--A-GEAKQLANA--S-TPA-V-Q-K-A-H-N-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ928323 [II-CFB-Dokdonia] PRGD_OTU031_fb029ab893b837172844d6cbc44071b6 gb|KJ928323| PRGD_OTU031_fb029ab893b837172844d6cbc44071b6, putative proteorhodopsin gene, partial cds. PRGD_OTU031_fb029ab893b837172844d6cbc44071b6, putative proteorhodopsin gene, partial cds. KJ928323 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) ACGCTTACTGTGCCACTGATGTGTGTCGAATTCTACCTCATTTTGAAAGCTGCGGGAGCGAAAACCGATCTGCTTTGGAAATTGATTGGCGCTTCAGTCGTAATGCTTGTGACTGGTTACTTTGGTGAAGCTGTCGCCCGCGACCAAGCTTGGCTCTGGGGATTGTTCTCAGGAATTGCTTACTTCTACATTGTCTATCTCATTTTCGCTGGTGAAGCAAAACAACTCGCCAACGCATCAACTCCTGCGGTCCAGAAAGCGCACAACATCTTGTGCAAGTTTGTTCTGATT TLTVPLMCVEFYLILKAAGAKTDLLWKLIGASVVMLVTGYFGEAVARDQAWLWGLFSGIAYFYIVYLIFAGEAKQLANASTPAVQKAHNILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCTTACTGTGCCACTGATGTGTGTCGAATTCTACCTCATTTTGAAAGCT---------GCG------GGAGCGAAAACC---GATCTG------------------------------------CTTTGGAAA---TTGATTGGCGCTTCAGTCGTAATGCTTGTGACTGGTTACTTTGGTGAA---------GCT------------------GTC------GCCCGC------------------------------------------------------------------------------------------------GACCAAGCT------------------TGGCTCTGG---GGATTGTTCTCAGGAATTGCTTACTTCTACATTGTCTATCTCATT---------------TTC------GCT---GGTGAAGCAAAACAACTCGCCAACGCA------TCA---ACTCCTGCG---GTC---CAG---AAA---GCG---CAC---AAC---ATCTTG---TGCAAGTTTGTTCTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLILKA---A--GAKT-DL------------LWK-LIGASVVMLVTGYFGE---A------V--AR--------------------------------DQA------WLW-GLFSGIAYFYIVYLI-----F--A-GEAKQLANA--S-TPA-V-Q-K-A-H-N-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ928301 [II-CFB-Dokdonia] PRGD_OTU031_2494f50dec6765471c52fe424a6d2502 gb|KJ928301| PRGD_OTU031_2494f50dec6765471c52fe424a6d2502, putative proteorhodopsin gene, partial cds. PRGD_OTU031_2494f50dec6765471c52fe424a6d2502, putative proteorhodopsin gene, partial cds. KJ928301 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ACGCTCACAGTACCCCTGATGTGCGTCGAATTCTACCTCATCTTGAAAGCTGCTGGAGCCAAGACTGACCTCCTTTGGAAATTGATTGGTGCATCAGTCGTGATGTTGGTGACAGGATACTTTGGTGAGGCGGTTTACCGTGACTCTGCGTGGTTGTGGGGCTTGTTCTCAGGAATAGCTTACTTCTACATCGTTTATCTCATTTTCGCTGGTGAAGCAAAACAACTCGCCAACGCATCTTCACCTGCAGTCCAGAAAGCCCACAACATCTTGTGCAAGTTTGTCCTGATT TLTVPLMCVEFYLILKAAGAKTDLLWKLIGASVVMLVTGYFGEAVYRDSAWLWGLFSGIAYFYIVYLIFAGEAKQLANASSPAVQKAHNILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCTCACAGTACCCCTGATGTGCGTCGAATTCTACCTCATCTTGAAAGCT---------GCT------GGAGCCAAGACT---GACCTC------------------------------------CTTTGGAAA---TTGATTGGTGCATCAGTCGTGATGTTGGTGACAGGATACTTTGGTGAG---------GCG------------------GTT------TACCGT------------------------------------------------------------------------------------------------GACTCTGCG------------------TGGTTGTGG---GGCTTGTTCTCAGGAATAGCTTACTTCTACATCGTTTATCTCATT---------------TTC------GCT---GGTGAAGCAAAACAACTCGCCAACGCA------TCT---TCACCTGCA---GTC---CAG---AAA---GCC---CAC---AAC---ATCTTG---TGCAAGTTTGTCCTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLILKA---A--GAKT-DL------------LWK-LIGASVVMLVTGYFGE---A------V--YR--------------------------------DSA------WLW-GLFSGIAYFYIVYLI-----F--A-GEAKQLANA--S-SPA-V-Q-K-A-H-N-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ928317 [II-CFB-Dokdonia] PRGD_OTU031_c941345b0ee4a297a05a0f1512baa1e8 gb|KJ928317| PRGD_OTU031_c941345b0ee4a297a05a0f1512baa1e8, putative proteorhodopsin gene, partial cds. PRGD_OTU031_c941345b0ee4a297a05a0f1512baa1e8, putative proteorhodopsin gene, partial cds. KJ928317 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-35.05, 23.73; -14.48, 113.45) ACGCTCACAGTACCTCTGATGTGTGTTGAATTTTACCTCATCTTGAAAGCTGCTGGAGCCAAGACTGACCTCCTTTGGAAATTGATTGGTGCATCAGTCGTGATGTTGGTGACAGGATACTTTGGTGAGGCAGTTTACCGTGATTCTGCGTGGTTGTGGGGCTTGTTCTCAGGACTAGCTTACTTCTACATCGTTTATCTCATCTTCGCTGGTGAAGCGAAACAACTCGCCAACGCGTCAACACCAGCAGTGCAAAACGCACACAACATCTTGTGCAAGTTCGTTCTGATT TLTVPLMCVEFYLILKAAGAKTDLLWKLIGASVVMLVTGYFGEAVYRDSAWLWGLFSGLAYFYIVYLIFAGEAKQLANASTPAVQNAHNILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCTCACAGTACCTCTGATGTGTGTTGAATTTTACCTCATCTTGAAAGCT---------GCT------GGAGCCAAGACT---GACCTC------------------------------------CTTTGGAAA---TTGATTGGTGCATCAGTCGTGATGTTGGTGACAGGATACTTTGGTGAG---------GCA------------------GTT------TACCGT------------------------------------------------------------------------------------------------GATTCTGCG------------------TGGTTGTGG---GGCTTGTTCTCAGGACTAGCTTACTTCTACATCGTTTATCTCATC---------------TTC------GCT---GGTGAAGCGAAACAACTCGCCAACGCG------TCA---ACACCAGCA---GTG---CAA---AAC---GCA---CAC---AAC---ATCTTG---TGCAAGTTCGTTCTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLILKA---A--GAKT-DL------------LWK-LIGASVVMLVTGYFGE---A------V--YR--------------------------------DSA------WLW-GLFSGLAYFYIVYLI-----F--A-GEAKQLANA--S-TPA-V-Q-N-A-H-N-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ928307 [II-CFB-Dokdonia] PRGD_OTU031_6013e202d7afe461be4e96603fd94c92 gb|KJ928307| PRGD_OTU031_6013e202d7afe461be4e96603fd94c92, putative proteorhodopsin gene, partial cds. PRGD_OTU031_6013e202d7afe461be4e96603fd94c92, putative proteorhodopsin gene, partial cds. KJ928307 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ACGCTCACAGTACCTCTGATGTGTGTTGAATTTTACCTCATCTTGAAAGCTGCTGGAGCCAAGACTGACCTCCTTTGGAAATTGATTGGTGCATCAGTCGTGATGTTGGTGACAGGATACTTTGGTGAGGCAGTTTACCGTGATTCTGCGTGGTTGTGGGGCTTGTTCTCTGGACTCGCTTACTTCTACATTGTATACCTCATTTTCGCTGGTGAAGCGAAACAACTCGCCAATGCGTCATCACCTGCAGTTCAAAACGCACACAACATCCTGTGCAAATTTGTACTCATC TLTVPLMCVEFYLILKAAGAKTDLLWKLIGASVVMLVTGYFGEAVYRDSAWLWGLFSGLAYFYIVYLIFAGEAKQLANASSPAVQNAHNILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCTCACAGTACCTCTGATGTGTGTTGAATTTTACCTCATCTTGAAAGCT---------GCT------GGAGCCAAGACT---GACCTC------------------------------------CTTTGGAAA---TTGATTGGTGCATCAGTCGTGATGTTGGTGACAGGATACTTTGGTGAG---------GCA------------------GTT------TACCGT------------------------------------------------------------------------------------------------GATTCTGCG------------------TGGTTGTGG---GGCTTGTTCTCTGGACTCGCTTACTTCTACATTGTATACCTCATT---------------TTC------GCT---GGTGAAGCGAAACAACTCGCCAATGCG------TCA---TCACCTGCA---GTT---CAA---AAC---GCA---CAC---AAC---ATCCTG---TGCAAATTTGTACTCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLILKA---A--GAKT-DL------------LWK-LIGASVVMLVTGYFGE---A------V--YR--------------------------------DSA------WLW-GLFSGLAYFYIVYLI-----F--A-GEAKQLANA--S-SPA-V-Q-N-A-H-N-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ928315 [II-CFB-Dokdonia] PRGD_OTU031_badb8924fcc6f977cee6d0bf380d04b7 gb|KJ928315| PRGD_OTU031_badb8924fcc6f977cee6d0bf380d04b7, putative proteorhodopsin gene, partial cds. PRGD_OTU031_badb8924fcc6f977cee6d0bf380d04b7, putative proteorhodopsin gene, partial cds. KJ928315 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) ACGCTCACAGTACCTCTGATGTGTGTTGAATTTTACCTCATCTTGAAAGCTGCTGGAGCCAAGACTGACCTCCTTTGGAAATTGATTGGTGCATCAGTCGTGATGTTGGTGACAGGATACTTTGGTGAGGCAGTTTACCGTGATTCTGCGTGGTTGTGGGGCTTGTTCTCTGGACTCGCTTACTTCTACATTGTATACCTCATTTTCGCTGGTGAAGCGAAACAACTCGCCAATGCGTCATCACCTGCAGTTCAAAAAGCACACAATATCCTGTGCAAATTTGTACTCATC TLTVPLMCVEFYLILKAAGAKTDLLWKLIGASVVMLVTGYFGEAVYRDSAWLWGLFSGLAYFYIVYLIFAGEAKQLANASSPAVQKAHNILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCTCACAGTACCTCTGATGTGTGTTGAATTTTACCTCATCTTGAAAGCT---------GCT------GGAGCCAAGACT---GACCTC------------------------------------CTTTGGAAA---TTGATTGGTGCATCAGTCGTGATGTTGGTGACAGGATACTTTGGTGAG---------GCA------------------GTT------TACCGT------------------------------------------------------------------------------------------------GATTCTGCG------------------TGGTTGTGG---GGCTTGTTCTCTGGACTCGCTTACTTCTACATTGTATACCTCATT---------------TTC------GCT---GGTGAAGCGAAACAACTCGCCAATGCG------TCA---TCACCTGCA---GTT---CAA---AAA---GCA---CAC---AAT---ATCCTG---TGCAAATTTGTACTCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLILKA---A--GAKT-DL------------LWK-LIGASVVMLVTGYFGE---A------V--YR--------------------------------DSA------WLW-GLFSGLAYFYIVYLI-----F--A-GEAKQLANA--S-SPA-V-Q-K-A-H-N-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ929552 [II-CFB-Dokdonia] PRGD_OTU151_3894c7c680a86cd5f0816ba44fb6544d gb|KJ929552| PRGD_OTU151_3894c7c680a86cd5f0816ba44fb6544d, putative proteorhodopsin gene, partial cds. PRGD_OTU151_3894c7c680a86cd5f0816ba44fb6544d, putative proteorhodopsin gene, partial cds. KJ929552 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) ATCCTTACAGTGCCATTAATGTGCGTAGAATTTTTTCTCATTCTAAAGGCTGCGGGAGCGAAAGTAAACTTACTCTGGAAGTTAATCGCAGCTTCAGCAGTAATGTTAGTGACAGGATACTTTGGAGAGGCAGTTTATCGAGACGCAGCCGCCATGTGGGGTCTGTTCTCAGGAATTGCCTATTTCTACATCGTGTACCTGATCATGTTTGGAGAAGCCAAAGCGTTAGCTGACAAATCTTCGGCAGGTGTTCAAACGGCACATAAACTGCTTTGCAGGTTCGTTTTAATC ILTVPLMCVEFFLILKAAGAKVNLLWKLIAASAVMLVTGYFGEAVYRDAAAMWGLFSGIAYFYIVYLIMFGEAKALADKSSAGVQTAHKLLCRFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCTTACAGTGCCATTAATGTGCGTAGAATTTTTTCTCATTCTAAAGGCT---------GCG------GGAGCGAAAGTA---AACTTA------------------------------------CTCTGGAAG---TTAATCGCAGCTTCAGCAGTAATGTTAGTGACAGGATACTTTGGAGAG---------GCA------------------GTT------TATCGA------------------------------------------------------------------------------------------------GACGCAGCC------------------GCCATGTGG---GGTCTGTTCTCAGGAATTGCCTATTTCTACATCGTGTACCTGATC---------------ATG------TTT---GGAGAAGCCAAAGCGTTAGCTGACAAA------TCT---TCGGCAGGT---GTT---CAA---ACG---GCA---CAT---AAA---CTGCTT---TGCAGGTTCGTTTTAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFFLILKA---A--GAKV-NL------------LWK-LIAASAVMLVTGYFGE---A------V--YR--------------------------------DAA------AMW-GLFSGIAYFYIVYLI-----M--F-GEAKALADK--S-SAG-V-Q-T-A-H-K-LL-CRFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ929553 [II-CFB-Dokdonia] PRGD_OTU151_5ea67609edbff6eb2c47902f558e513d gb|KJ929553| PRGD_OTU151_5ea67609edbff6eb2c47902f558e513d, putative proteorhodopsin gene, partial cds. PRGD_OTU151_5ea67609edbff6eb2c47902f558e513d, putative proteorhodopsin gene, partial cds. KJ929553 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATCCTTACAGTGCCATTAATGTGCGTAGAATTTTATCTCATTTTAAAGGCTGCGGGAGCGAAAGTAAACTTACTCTGGAAGTTAATCGCAGCTTCAGCAGTAATGTTAGTGACAGGATACTTTGGAGAGGCAGTTTATCGAGACGCGGCCGCCATGTGGGGTCTGTTCTCAGGAATTGCCTATTTCTACATCGTGTACCTGATCATGTTTGGAGAAGCCAAAGCGTTAGCTGACAAATCTTCGGCAGGTGTTCAAACGGCACATAAACTGCTTTGCAGGTTCGTTTTAATC ILTVPLMCVEFYLILKAAGAKVNLLWKLIAASAVMLVTGYFGEAVYRDAAAMWGLFSGIAYFYIVYLIMFGEAKALADKSSAGVQTAHKLLCRFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCTTACAGTGCCATTAATGTGCGTAGAATTTTATCTCATTTTAAAGGCT---------GCG------GGAGCGAAAGTA---AACTTA------------------------------------CTCTGGAAG---TTAATCGCAGCTTCAGCAGTAATGTTAGTGACAGGATACTTTGGAGAG---------GCA------------------GTT------TATCGA------------------------------------------------------------------------------------------------GACGCGGCC------------------GCCATGTGG---GGTCTGTTCTCAGGAATTGCCTATTTCTACATCGTGTACCTGATC---------------ATG------TTT---GGAGAAGCCAAAGCGTTAGCTGACAAA------TCT---TCGGCAGGT---GTT---CAA---ACG---GCA---CAT---AAA---CTGCTT---TGCAGGTTCGTTTTAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GAKV-NL------------LWK-LIAASAVMLVTGYFGE---A------V--YR--------------------------------DAA------AMW-GLFSGIAYFYIVYLI-----M--F-GEAKALADK--S-SAG-V-Q-T-A-H-K-LL-CRFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ929550 [II-CFB-Dokdonia] PRGD_OTU151_otuREP_7a7418b5d231e5d984d2bd86344e88f9 gb|KJ929550| PRGD_OTU151_otuREP_7a7418b5d231e5d984d2bd86344e88f9, putative proteorhodopsin gene, partial cds. PRGD_OTU151_otuREP_7a7418b5d231e5d984d2bd86344e88f9, putative proteorhodopsin gene, partial cds. KJ929550 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), North Pacific Ocean (50.06, -139.53), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) ATACTTACAGTGCCATTAATGTGCGTAGAATTTTATCTCATTTTGAAGGCTGCGGGAGCGAAAGTAAACTTACTCTGGAAGTTAATCGCAGCTTCAGCAGTAATGTTAGTGACAGGATACTTTGGAGAGGCAGTTTATCGAGACGCGGCCGCCATGTGGGGTCTGTTCTCAGGCATTGCCTATTTCTACATCGTGTACCTGATCATGTTTGGAGAAGCCAAAGCGTTAGCTGACAAATCTTCGGCAGGTGTTCAAACGGCACATAAACTGCTTTGCAGGTTCGTTTTAATC ILTVPLMCVEFYLILKAAGAKVNLLWKLIAASAVMLVTGYFGEAVYRDAAAMWGLFSGIAYFYIVYLIMFGEAKALADKSSAGVQTAHKLLCRFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTTACAGTGCCATTAATGTGCGTAGAATTTTATCTCATTTTGAAGGCT---------GCG------GGAGCGAAAGTA---AACTTA------------------------------------CTCTGGAAG---TTAATCGCAGCTTCAGCAGTAATGTTAGTGACAGGATACTTTGGAGAG---------GCA------------------GTT------TATCGA------------------------------------------------------------------------------------------------GACGCGGCC------------------GCCATGTGG---GGTCTGTTCTCAGGCATTGCCTATTTCTACATCGTGTACCTGATC---------------ATG------TTT---GGAGAAGCCAAAGCGTTAGCTGACAAA------TCT---TCGGCAGGT---GTT---CAA---ACG---GCA---CAT---AAA---CTGCTT---TGCAGGTTCGTTTTAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GAKV-NL------------LWK-LIAASAVMLVTGYFGE---A------V--YR--------------------------------DAA------AMW-GLFSGIAYFYIVYLI-----M--F-GEAKALADK--S-SAG-V-Q-T-A-H-K-LL-CRFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ929551 [II-CFB-Dokdonia] PRGD_OTU151_2df7cebf1f1a18ff874453b4fc5e4d09 gb|KJ929551| PRGD_OTU151_2df7cebf1f1a18ff874453b4fc5e4d09, putative proteorhodopsin gene, partial cds. PRGD_OTU151_2df7cebf1f1a18ff874453b4fc5e4d09, putative proteorhodopsin gene, partial cds. KJ929551 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Indian Ocean (-33.28, 45.35) ATCCTTACCGTGCCATTAATGTGCGTAGAATTTTATCTCATTTTAAAAGCTGCGGGAGCGAAAGTAAACTTACTCTGGAAGTTAATCGCAGCTTCAGTAGTAATGTTAGTGGCAGGATATTTTGGAGAGGCAGTTTATAGAGACGCGGCCGCCATGTGGGGTCTGTTCTCAGGAATTGCCTATTTCTACATCGTGTACCTGATTATGTTTGGAGAAGCCAAAGCGTTAGCTGACAAATCTTCGGCAGGTGTACAAATGGCACATAAACTTCTTTGCAGGTTCGTTTTAATC ILTVPLMCVEFYLILKAAGAKVNLLWKLIAASVVMLVAGYFGEAVYRDAAAMWGLFSGIAYFYIVYLIMFGEAKALADKSSAGVQMAHKLLCRFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCTTACCGTGCCATTAATGTGCGTAGAATTTTATCTCATTTTAAAAGCT---------GCG------GGAGCGAAAGTA---AACTTA------------------------------------CTCTGGAAG---TTAATCGCAGCTTCAGTAGTAATGTTAGTGGCAGGATATTTTGGAGAG---------GCA------------------GTT------TATAGA------------------------------------------------------------------------------------------------GACGCGGCC------------------GCCATGTGG---GGTCTGTTCTCAGGAATTGCCTATTTCTACATCGTGTACCTGATT---------------ATG------TTT---GGAGAAGCCAAAGCGTTAGCTGACAAA------TCT---TCGGCAGGT---GTA---CAA---ATG---GCA---CAT---AAA---CTTCTT---TGCAGGTTCGTTTTAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GAKV-NL------------LWK-LIAASVVMLVAGYFGE---A------V--YR--------------------------------DAA------AMW-GLFSGIAYFYIVYLI-----M--F-GEAKALADK--S-SAG-V-Q-M-A-H-K-LL-CRFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ928296 [II-CFB-Dokdonia] PRGD_OTU031_otuREP_8b83045e1020377c9c0a2d33cc690f7c gb|KJ928296| PRGD_OTU031_otuREP_8b83045e1020377c9c0a2d33cc690f7c, putative proteorhodopsin gene, partial cds. PRGD_OTU031_otuREP_8b83045e1020377c9c0a2d33cc690f7c, putative proteorhodopsin gene, partial cds. KJ928296 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) ACACTCACCGTACCACTGATGTGCGTGGAGTTCTACCTCATCTTGAAGGCTGCAGGCGCCAAGACCGACCTCCTCTGGAAGTTGATCGGTGCATCTGTGGTGATGCTCGTCACGGGCTACTTCGGTGAGGCTGTCTACATGGACGGATCTGGACCAGCCGTTTGGGGCTTGGTTTCTGGTTTGGCCTATTTCTACATCGTGTACTTGATCTACGCAGGTGAAGCCAAGCAGTTGGCGAACGCTTCTAGCCCTGCTGTTCAGAAGGCACACGGCATTCTGTGCAAGTTTGTGTTGATC TLTVPLMCVEFYLILKAAGAKTDLLWKLIGASVVMLVTGYFGEAVYMDGSGPAVWGLVSGLAYFYIVYLIYAGEAKQLANASSPAVQKAHGILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACTCACCGTACCACTGATGTGCGTGGAGTTCTACCTCATCTTGAAGGCT---------GCA------GGCGCCAAGACC---GACCTC------------------------------------CTCTGGAAG---TTGATCGGTGCATCTGTGGTGATGCTCGTCACGGGCTACTTCGGTGAG---------GCT------------------GTC------TACATG------------------------------------------------------------------------------------------------GACGGATCT------------GGACCAGCCGTTTGG---GGCTTGGTTTCTGGTTTGGCCTATTTCTACATCGTGTACTTGATC---------------TAC------GCA---GGTGAAGCCAAGCAGTTGGCGAACGCT------TCT---AGCCCTGCT---GTT---CAG---AAG---GCA---CAC---GGC---ATTCTG---TGCAAGTTTGTGTTGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLILKA---A--GAKT-DL------------LWK-LIGASVVMLVTGYFGE---A------V--YM--------------------------------DGS----GPAVW-GLVSGLAYFYIVYLI-----Y--A-GEAKQLANA--S-SPA-V-Q-K-A-H-G-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ928319 [II-CFB-Dokdonia] PRGD_OTU031_ced2701345b8d4a4885f534f62146a60 gb|KJ928319| PRGD_OTU031_ced2701345b8d4a4885f534f62146a60, putative proteorhodopsin gene, partial cds. PRGD_OTU031_ced2701345b8d4a4885f534f62146a60, putative proteorhodopsin gene, partial cds. KJ928319 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ACACTCACCGTGCCTTTGATGTGCGTTGAGTTCTACCTCATTTTGAAGGCTGCAGGCGCCAAGACCGACCTCCTCTGGAAGTTGATCGGTGCATCTGTGGTGATGCTCGTTACGGGCTACTTTGGAGAGGCTGTCTACATGGACGGATCTGGACCAGCCGTATGGGGCTTGGTTTCTGGTTTGGCCTACTTCTACATCGTGTACTTGATTTACGCAGGTGAAGCCAAGCAATTGGCGAACGCTTCTAGCCCTGCCGTTCAGAAGGCACACGGCATTTTGTGCAAGTTTGTGTTGATT TLTVPLMCVEFYLILKAAGAKTDLLWKLIGASVVMLVTGYFGEAVYMDGSGPAVWGLVSGLAYFYIVYLIYAGEAKQLANASSPAVQKAHGILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACTCACCGTGCCTTTGATGTGCGTTGAGTTCTACCTCATTTTGAAGGCT---------GCA------GGCGCCAAGACC---GACCTC------------------------------------CTCTGGAAG---TTGATCGGTGCATCTGTGGTGATGCTCGTTACGGGCTACTTTGGAGAG---------GCT------------------GTC------TACATG------------------------------------------------------------------------------------------------GACGGATCT------------GGACCAGCCGTATGG---GGCTTGGTTTCTGGTTTGGCCTACTTCTACATCGTGTACTTGATT---------------TAC------GCA---GGTGAAGCCAAGCAATTGGCGAACGCT------TCT---AGCCCTGCC---GTT---CAG---AAG---GCA---CAC---GGC---ATTTTG---TGCAAGTTTGTGTTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLILKA---A--GAKT-DL------------LWK-LIGASVVMLVTGYFGE---A------V--YM--------------------------------DGS----GPAVW-GLVSGLAYFYIVYLI-----Y--A-GEAKQLANA--S-SPA-V-Q-K-A-H-G-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ928298 [II-CFB-Dokdonia] PRGD_OTU031_0d376ae1db76d44e206534c285b8c147 gb|KJ928298| PRGD_OTU031_0d376ae1db76d44e206534c285b8c147, putative proteorhodopsin gene, partial cds. PRGD_OTU031_0d376ae1db76d44e206534c285b8c147, putative proteorhodopsin gene, partial cds. KJ928298 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ACCTTGACCGTGCCTCTGATGTGCGTGGAATTCTACCTCATTTTGAAGGCAGCCGGTGCCAAGACCGACCTCTTGTGGAAGCTCATTGGTGCTTCTGTGGTCATGTTGGTCACCGGTTACTTCGGTGAGGCGGTGTACATGGATGGATCCGGTCCAGCCATCTGGGGCTTGATCTCAGGCCTGGCCTATTTCTACATCGTGTACCTCATCTACGCAGGTGAAGCCAAGCAACTCGCAAACGCTTCTACTCCTGCGGTGCAGAAGGCACACAACATCCTTTGCAAGTTCGTGTTGATC TLTVPLMCVEFYLILKAAGAKTDLLWKLIGASVVMLVTGYFGEAVYMDGSGPAIWGLISGLAYFYIVYLIYAGEAKQLANASTPAVQKAHNILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCTTGACCGTGCCTCTGATGTGCGTGGAATTCTACCTCATTTTGAAGGCA---------GCC------GGTGCCAAGACC---GACCTC------------------------------------TTGTGGAAG---CTCATTGGTGCTTCTGTGGTCATGTTGGTCACCGGTTACTTCGGTGAG---------GCG------------------GTG------TACATG------------------------------------------------------------------------------------------------GATGGATCC------------GGTCCAGCCATCTGG---GGCTTGATCTCAGGCCTGGCCTATTTCTACATCGTGTACCTCATC---------------TAC------GCA---GGTGAAGCCAAGCAACTCGCAAACGCT------TCT---ACTCCTGCG---GTG---CAG---AAG---GCA---CAC---AAC---ATCCTT---TGCAAGTTCGTGTTGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLILKA---A--GAKT-DL------------LWK-LIGASVVMLVTGYFGE---A------V--YM--------------------------------DGS----GPAIW-GLISGLAYFYIVYLI-----Y--A-GEAKQLANA--S-TPA-V-Q-K-A-H-N-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ928299 [II-CFB-Dokdonia] PRGD_OTU031_13022816a0c89f243b5efe918442fcec gb|KJ928299| PRGD_OTU031_13022816a0c89f243b5efe918442fcec, putative proteorhodopsin gene, partial cds. PRGD_OTU031_13022816a0c89f243b5efe918442fcec, putative proteorhodopsin gene, partial cds. KJ928299 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) ACCCTCACTGTGCCTCTGATGTGCGTGGAGTTCTATCTCATCTTGAAAGCCGCTGGCGCCAAGACCGGCCTCCTTTGGAAGTTGATCTGGGCTTCTGTGGTGATGCTCGTGGCAGGCTACCTCGGTGAGGCAGTCTACAACACGGGTTCAGGACCAGCCATCTGGGGTCTCTTCTCAGGTTTGGCTTACTTCTACATCGTGTACCTCATCATGGCAGGTGAAGCCAAGCAGTTGGCTCAGGCTTCCAGCCCCGCCGTGCAGAAGGCTCACGACATCCTTTGCAAGTTCGTGTTGATC TLTVPLMCVEFYLILKAAGAKTGLLWKLIWASVVMLVAGYLGEAVYNTGSGPAIWGLFSGLAYFYIVYLIMAGEAKQLAQASSPAVQKAHDILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCCTCACTGTGCCTCTGATGTGCGTGGAGTTCTATCTCATCTTGAAAGCC---------GCT------GGCGCCAAGACC---GGCCTC------------------------------------CTTTGGAAG---TTGATCTGGGCTTCTGTGGTGATGCTCGTGGCAGGCTACCTCGGTGAG---------GCA------------------GTC------TACAAC------------------------------------------------------ACG---------GGT---------------------------TCAGGACCA------------------GCCATCTGG---GGTCTCTTCTCAGGTTTGGCTTACTTCTACATCGTGTACCTCATC---------------ATG------GCA---GGTGAAGCCAAGCAGTTGGCTCAGGCT------TCC---AGCCCCGCC---GTG---CAG---AAG---GCT---CAC---GAC---ATCCTT---TGCAAGTTCGTGTTGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLILKA---A--GAKT-GL------------LWK-LIWASVVMLVAGYLGE---A------V--YN------------------T---G---------SGP------AIW-GLFSGLAYFYIVYLI-----M--A-GEAKQLAQA--S-SPA-V-Q-K-A-H-D-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ928300 [II-CFB-Dokdonia] PRGD_OTU031_1ca5d13efe13b7821657690ebd2c8b6b gb|KJ928300| PRGD_OTU031_1ca5d13efe13b7821657690ebd2c8b6b, putative proteorhodopsin gene, partial cds. PRGD_OTU031_1ca5d13efe13b7821657690ebd2c8b6b, putative proteorhodopsin gene, partial cds. KJ928300 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ACCCTCACTGTGCCTCTGATGTGCGTGGAGTTCTACCTCATCTTGAAAGCCGCTGGCGCCAAGACCGGCCTCCTCTGGAAGTTGATCTGGGCTTCTGTGGTGATGCTCGTTGCTGGCTACCTCGGTGAGGCAGTCTACAACACGGGTTCAGGACCAGCCATCTGGGGTCTCTTCTCAGGTTTGGCTTACTTCTACATCGTGTACCTCATCATGGCAGGCGAAGCCAAGCAATTGGCTCAGGCTTCTAGCCCCGCTGTGCAGAAGGCTCACGACATCCTCTGCAAGTTCGTGTTGATC TLTVPLMCVEFYLILKAAGAKTGLLWKLIWASVVMLVAGYLGEAVYNTGSGPAIWGLFSGLAYFYIVYLIMAGEAKQLAQASSPAVQKAHDILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCCTCACTGTGCCTCTGATGTGCGTGGAGTTCTACCTCATCTTGAAAGCC---------GCT------GGCGCCAAGACC---GGCCTC------------------------------------CTCTGGAAG---TTGATCTGGGCTTCTGTGGTGATGCTCGTTGCTGGCTACCTCGGTGAG---------GCA------------------GTC------TACAAC------------------------------------------------------ACG---------GGT---------------------------TCAGGACCA------------------GCCATCTGG---GGTCTCTTCTCAGGTTTGGCTTACTTCTACATCGTGTACCTCATC---------------ATG------GCA---GGCGAAGCCAAGCAATTGGCTCAGGCT------TCT---AGCCCCGCT---GTG---CAG---AAG---GCT---CAC---GAC---ATCCTC---TGCAAGTTCGTGTTGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLILKA---A--GAKT-GL------------LWK-LIWASVVMLVAGYLGE---A------V--YN------------------T---G---------SGP------AIW-GLFSGLAYFYIVYLI-----M--A-GEAKQLAQA--S-SPA-V-Q-K-A-H-D-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ928312 [II-CFB-Dokdonia] PRGD_OTU031_95487931b8a12e7826b506e7f0dd405f gb|KJ928312| PRGD_OTU031_95487931b8a12e7826b506e7f0dd405f, putative proteorhodopsin gene, partial cds. PRGD_OTU031_95487931b8a12e7826b506e7f0dd405f, putative proteorhodopsin gene, partial cds. KJ928312 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) ACCCTCACTGTGCCTCTGATGTGCGTGGAGTTCTATCTCATCTTGAAAGCCGCTGGCGCCAAGACCAGCCTCCTCTGGAAGTTGATCTGGGCTTCTGCGGTGATGCTCGTTGCTGGCTACCTCGGTGAGGCAGTCTACAACACGGGTTCAGGACCAGCCATCTGGGGTCTCTTCTCAGGTTTGGCTTACTTCTACATCGTGTACCTCATCATGGCAGGTGAAGCCAAGCAGTTGGCTCAGGCTTCTAGCCCCGCTGTGCAGAAGGCACACGACATCCTTTGCAAGTTCGTGTTGATC TLTVPLMCVEFYLILKAAGAKTSLLWKLIWASAVMLVAGYLGEAVYNTGSGPAIWGLFSGLAYFYIVYLIMAGEAKQLAQASSPAVQKAHDILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCCTCACTGTGCCTCTGATGTGCGTGGAGTTCTATCTCATCTTGAAAGCC---------GCT------GGCGCCAAGACC---AGCCTC------------------------------------CTCTGGAAG---TTGATCTGGGCTTCTGCGGTGATGCTCGTTGCTGGCTACCTCGGTGAG---------GCA------------------GTC------TACAAC------------------------------------------------------ACG---------GGT---------------------------TCAGGACCA------------------GCCATCTGG---GGTCTCTTCTCAGGTTTGGCTTACTTCTACATCGTGTACCTCATC---------------ATG------GCA---GGTGAAGCCAAGCAGTTGGCTCAGGCT------TCT---AGCCCCGCT---GTG---CAG---AAG---GCA---CAC---GAC---ATCCTT---TGCAAGTTCGTGTTGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLILKA---A--GAKT-SL------------LWK-LIWASAVMLVAGYLGE---A------V--YN------------------T---G---------SGP------AIW-GLFSGLAYFYIVYLI-----M--A-GEAKQLAQA--S-SPA-V-Q-K-A-H-D-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ928320 [II-CFB-Dokdonia] PRGD_OTU031_d7aa2435133fb8bff63ba0d8e641230c gb|KJ928320| PRGD_OTU031_d7aa2435133fb8bff63ba0d8e641230c, putative proteorhodopsin gene, partial cds. PRGD_OTU031_d7aa2435133fb8bff63ba0d8e641230c, putative proteorhodopsin gene, partial cds. KJ928320 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-14.48, 113.45) ACCCTCACTGTGCCTCTGATGTGCGTGGAGTTCTATCTCATCTTGAAAGCCGCTGGCGCCAAGACCAGCCTCCTCTGGAAGTTGATCTGGGCTTCTGCGGTGATGCTTGTGGCTGGCTACCTCGGTGAGGCAGTTTACAACACAGGTTCAGGACCAGCCATCTGGGGTCTCTTCTCAGGTTTGGCTTACTTCTACATCGTGTACCTCATCATGGCAGGTGAAGCCAAGCAGTTGGCTCAGGCTTCAAGCCCCGCTGTGCAGAAGGCACACGACATCCTTTGCAAGTTCGTGTTGATC TLTVPLMCVEFYLILKAAGAKTSLLWKLIWASAVMLVAGYLGEAVYNTGSGPAIWGLFSGLAYFYIVYLIMAGEAKQLAQASSPAVQKAHDILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCCTCACTGTGCCTCTGATGTGCGTGGAGTTCTATCTCATCTTGAAAGCC---------GCT------GGCGCCAAGACC---AGCCTC------------------------------------CTCTGGAAG---TTGATCTGGGCTTCTGCGGTGATGCTTGTGGCTGGCTACCTCGGTGAG---------GCA------------------GTT------TACAAC------------------------------------------------------ACA---------GGT---------------------------TCAGGACCA------------------GCCATCTGG---GGTCTCTTCTCAGGTTTGGCTTACTTCTACATCGTGTACCTCATC---------------ATG------GCA---GGTGAAGCCAAGCAGTTGGCTCAGGCT------TCA---AGCCCCGCT---GTG---CAG---AAG---GCA---CAC---GAC---ATCCTT---TGCAAGTTCGTGTTGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLILKA---A--GAKT-SL------------LWK-LIWASAVMLVAGYLGE---A------V--YN------------------T---G---------SGP------AIW-GLFSGLAYFYIVYLI-----M--A-GEAKQLAQA--S-SPA-V-Q-K-A-H-D-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ928309 [II-CFB-Dokdonia] PRGD_OTU031_6a8a1069905fdde2f3ae005a40a732ce gb|KJ928309| PRGD_OTU031_6a8a1069905fdde2f3ae005a40a732ce, putative proteorhodopsin gene, partial cds. PRGD_OTU031_6a8a1069905fdde2f3ae005a40a732ce, putative proteorhodopsin gene, partial cds. KJ928309 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) ACCCTCACTGTGCCTCTGATGTGCGTGGAGTTCTACCTCATCTTGAAAGCCGCTGGCGCCAAGACCGGCCTCCTCTGGAAGTTGATTTGGGCTTCTGTGGTGATGCTCGTGACTGGCTACCTCGGTGAGGCAGTCTACAACACGGGTTCAGGACCAGCCATCTGGGGTCTCTTCTCAGGTTTGGCTTACTTCTACATCGTGTACCTCATCATGGCAGGCGAAGCCAAGCAGTTGGCTCAGGCTTCTAGCCCCGCTGTGCAGAAGGCTCACGACATCCTCTGCAAGTTCGTGTTGATC TLTVPLMCVEFYLILKAAGAKTGLLWKLIWASVVMLVTGYLGEAVYNTGSGPAIWGLFSGLAYFYIVYLIMAGEAKQLAQASSPAVQKAHDILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCCTCACTGTGCCTCTGATGTGCGTGGAGTTCTACCTCATCTTGAAAGCC---------GCT------GGCGCCAAGACC---GGCCTC------------------------------------CTCTGGAAG---TTGATTTGGGCTTCTGTGGTGATGCTCGTGACTGGCTACCTCGGTGAG---------GCA------------------GTC------TACAAC------------------------------------------------------ACG---------GGT---------------------------TCAGGACCA------------------GCCATCTGG---GGTCTCTTCTCAGGTTTGGCTTACTTCTACATCGTGTACCTCATC---------------ATG------GCA---GGCGAAGCCAAGCAGTTGGCTCAGGCT------TCT---AGCCCCGCT---GTG---CAG---AAG---GCT---CAC---GAC---ATCCTC---TGCAAGTTCGTGTTGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLILKA---A--GAKT-GL------------LWK-LIWASVVMLVTGYLGE---A------V--YN------------------T---G---------SGP------AIW-GLFSGLAYFYIVYLI-----M--A-GEAKQLAQA--S-SPA-V-Q-K-A-H-D-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ928314 [II-CFB-Dokdonia] PRGD_OTU031_b550109ec63a7de697342abcf3271fed gb|KJ928314| PRGD_OTU031_b550109ec63a7de697342abcf3271fed, putative proteorhodopsin gene, partial cds. PRGD_OTU031_b550109ec63a7de697342abcf3271fed, putative proteorhodopsin gene, partial cds. KJ928314 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ACACTCACTGTGCCTCTGATGTGCGTGGAGTTCTACCTCATCTTGAAAGCCGCTGGCGCCAAGACCGGCCTCCTCTGGAAGTTGATCTGGGCTTCTGTGGTGATGCTCGTGACTGGCTACCTCGGTGAGGCAGTCTACAACACGGGTTCAGGACCAGCCATCTGGGGTCTCTTCTCAGGTTTGGCTTACTTCTACATTGTGTACCTCATCATGGCAGGCGAAGCCAAGCAGTTGGCTCAGGCTTCTAGCCCCGCTGTGCAGAAGGCACACGGCATCCTCTGCAAGTTCGTGTTGATC TLTVPLMCVEFYLILKAAGAKTGLLWKLIWASVVMLVTGYLGEAVYNTGSGPAIWGLFSGLAYFYIVYLIMAGEAKQLAQASSPAVQKAHGILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACTCACTGTGCCTCTGATGTGCGTGGAGTTCTACCTCATCTTGAAAGCC---------GCT------GGCGCCAAGACC---GGCCTC------------------------------------CTCTGGAAG---TTGATCTGGGCTTCTGTGGTGATGCTCGTGACTGGCTACCTCGGTGAG---------GCA------------------GTC------TACAAC------------------------------------------------------ACG---------GGT---------------------------TCAGGACCA------------------GCCATCTGG---GGTCTCTTCTCAGGTTTGGCTTACTTCTACATTGTGTACCTCATC---------------ATG------GCA---GGCGAAGCCAAGCAGTTGGCTCAGGCT------TCT---AGCCCCGCT---GTG---CAG---AAG---GCA---CAC---GGC---ATCCTC---TGCAAGTTCGTGTTGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLILKA---A--GAKT-GL------------LWK-LIWASVVMLVTGYLGE---A------V--YN------------------T---G---------SGP------AIW-GLFSGLAYFYIVYLI-----M--A-GEAKQLAQA--S-SPA-V-Q-K-A-H-G-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ928302 [II-CFB-Dokdonia] PRGD_OTU031_2bfb09ad90d040e965d1cba766f4e4c6 gb|KJ928302| PRGD_OTU031_2bfb09ad90d040e965d1cba766f4e4c6, putative proteorhodopsin gene, partial cds. PRGD_OTU031_2bfb09ad90d040e965d1cba766f4e4c6, putative proteorhodopsin gene, partial cds. KJ928302 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) ACCCTCACTGTGCCTCTGATGTGCGTGGAGTTCTACCTCATCTTGAAAGCCGCTGGCGCCAAGACTGGCCTCCTCTGGAAGTTGATCTGGGCTTCTGTGGTGATGCTCGTGACTGGCTACCTCGGTGAGGCAGTCTACAACACGGGTTCAGGACCAGCCATCTGGGGTCTCTTCTCAGGTTTGGCTTACTTCTACATCGTGTACCTCATCATGGCAGGCGAAGCCAAGCAGTTGGCTCAGGCTTCTAGCCCCGCTGTGCAGAAGGCCCACGACATCCTTTGCAAGTTCGTGTTGATT TLTVPLMCVEFYLILKAAGAKTGLLWKLIWASVVMLVTGYLGEAVYNTGSGPAIWGLFSGLAYFYIVYLIMAGEAKQLAQASSPAVQKAHDILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCCTCACTGTGCCTCTGATGTGCGTGGAGTTCTACCTCATCTTGAAAGCC---------GCT------GGCGCCAAGACT---GGCCTC------------------------------------CTCTGGAAG---TTGATCTGGGCTTCTGTGGTGATGCTCGTGACTGGCTACCTCGGTGAG---------GCA------------------GTC------TACAAC------------------------------------------------------ACG---------GGT---------------------------TCAGGACCA------------------GCCATCTGG---GGTCTCTTCTCAGGTTTGGCTTACTTCTACATCGTGTACCTCATC---------------ATG------GCA---GGCGAAGCCAAGCAGTTGGCTCAGGCT------TCT---AGCCCCGCT---GTG---CAG---AAG---GCC---CAC---GAC---ATCCTT---TGCAAGTTCGTGTTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLILKA---A--GAKT-GL------------LWK-LIWASVVMLVTGYLGE---A------V--YN------------------T---G---------SGP------AIW-GLFSGLAYFYIVYLI-----M--A-GEAKQLAQA--S-SPA-V-Q-K-A-H-D-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ928305 [II-CFB-Dokdonia] PRGD_OTU031_5a093931109e01e998203f6bbefc703e gb|KJ928305| PRGD_OTU031_5a093931109e01e998203f6bbefc703e, putative proteorhodopsin gene, partial cds. PRGD_OTU031_5a093931109e01e998203f6bbefc703e, putative proteorhodopsin gene, partial cds. KJ928305 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ACACTCACAGTGCCTCTGATGTGCGTGGAGTTCTACCTCATCTTGAAAGCCGCTGGTGCCAAGACAGGCCTCCTTTGGAAGCTCATCTGGGCTTCTGTGGTGATGCTCGTGACTGGATACCTCGGAGAGGCCGTCTACAACACGGGAACAGGACCAGCCATCTGGGGTCTCTTCTCAGGTTTGGCCTATTTCTACATCGTGTACCTCATCATGGCAGGTGAAGCCAAGCAATTGGCAAACGCTTCATCTCCTGCGGTGCAAAAGGCTCACGACATCCTTTGCAAGTTCGTTTTGATC TLTVPLMCVEFYLILKAAGAKTGLLWKLIWASVVMLVTGYLGEAVYNTGTGPAIWGLFSGLAYFYIVYLIMAGEAKQLANASSPAVQKAHDILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACTCACAGTGCCTCTGATGTGCGTGGAGTTCTACCTCATCTTGAAAGCC---------GCT------GGTGCCAAGACA---GGCCTC------------------------------------CTTTGGAAG---CTCATCTGGGCTTCTGTGGTGATGCTCGTGACTGGATACCTCGGAGAG---------GCC------------------GTC------TACAAC------------------------------------------------------ACG---------GGA---------------------------ACAGGACCA------------------GCCATCTGG---GGTCTCTTCTCAGGTTTGGCCTATTTCTACATCGTGTACCTCATC---------------ATG------GCA---GGTGAAGCCAAGCAATTGGCAAACGCT------TCA---TCTCCTGCG---GTG---CAA---AAG---GCT---CAC---GAC---ATCCTT---TGCAAGTTCGTTTTGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLILKA---A--GAKT-GL------------LWK-LIWASVVMLVTGYLGE---A------V--YN------------------T---G---------TGP------AIW-GLFSGLAYFYIVYLI-----M--A-GEAKQLANA--S-SPA-V-Q-K-A-H-D-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ928321 [II-CFB-Dokdonia] PRGD_OTU031_ecf613a3b618cbce60b9ca458d797465 gb|KJ928321| PRGD_OTU031_ecf613a3b618cbce60b9ca458d797465, putative proteorhodopsin gene, partial cds. PRGD_OTU031_ecf613a3b618cbce60b9ca458d797465, putative proteorhodopsin gene, partial cds. KJ928321 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-14.48, 113.45; -33.28, 45.35) ACACTCACAGTGCCTCTGATGTGCGTGGAGTTCTACCTCATCTTGAAAGCCGCTGGTGCCAAGACAGGCCTCCTTTGGAAGCTCATCTGGGCTTCTGTGGTGATGCTCGTGACTGGATACCTCGGAGAGGCAGTCTACAACACGGGAACAGGACCAGCCATCTGGGGTCTCTTCTCAGGTTTGGCCTACTTCTACATCGTGTACCTCATCATGGCAGGTGAAGCCAAGCAATTGGCAAACGCTTCATCTCCTGCGGTGCAAAAGGCTCACGACATCCTTTGCAAGTTCGTGTTGATC TLTVPLMCVEFYLILKAAGAKTGLLWKLIWASVVMLVTGYLGEAVYNTGTGPAIWGLFSGLAYFYIVYLIMAGEAKQLANASSPAVQKAHDILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACTCACAGTGCCTCTGATGTGCGTGGAGTTCTACCTCATCTTGAAAGCC---------GCT------GGTGCCAAGACA---GGCCTC------------------------------------CTTTGGAAG---CTCATCTGGGCTTCTGTGGTGATGCTCGTGACTGGATACCTCGGAGAG---------GCA------------------GTC------TACAAC------------------------------------------------------ACG---------GGA---------------------------ACAGGACCA------------------GCCATCTGG---GGTCTCTTCTCAGGTTTGGCCTACTTCTACATCGTGTACCTCATC---------------ATG------GCA---GGTGAAGCCAAGCAATTGGCAAACGCT------TCA---TCTCCTGCG---GTG---CAA---AAG---GCT---CAC---GAC---ATCCTT---TGCAAGTTCGTGTTGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLILKA---A--GAKT-GL------------LWK-LIWASVVMLVTGYLGE---A------V--YN------------------T---G---------TGP------AIW-GLFSGLAYFYIVYLI-----M--A-GEAKQLANA--S-SPA-V-Q-K-A-H-D-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ928310 [II-CFB-Dokdonia] PRGD_OTU031_77280914600512d730127df0f93e5fef gb|KJ928310| PRGD_OTU031_77280914600512d730127df0f93e5fef, putative proteorhodopsin gene, partial cds. PRGD_OTU031_77280914600512d730127df0f93e5fef, putative proteorhodopsin gene, partial cds. KJ928310 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185) ACACTGACAGTGCCTTTGATGTGTGTAGAGTTTTACTTGATTCTGAAAGCTGCAGGAGCGAAAACATCGTTGCTATGGAAACTCATCGGAGCTTCTGTTGTGATGTTGGTAACCGGCTACTTTGGTGAAGCAGTATACACGACAGGCTCATCTCCCGCTCTCTGGGGATTGGTTTCTGGCCTCGCTTATTTCTACATCGTCTATTTGATTATGGCAGGTGAAGCGAAGAAACTTGCTGACAAGTCATCTCCAGCGGTACAAAAAGCACACGGAATTCTGTGCAAGTTTGTCTTGATT TLTVPLMCVEFYLILKAAGAKTSLLWKLIGASVVMLVTGYFGEAVYTTGSSPALWGLVSGLAYFYIVYLIMAGEAKKLADKSSPAVQKAHGILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACTGACAGTGCCTTTGATGTGTGTAGAGTTTTACTTGATTCTGAAAGCT---------GCA------GGAGCGAAAACA---TCGTTG------------------------------------CTATGGAAA---CTCATCGGAGCTTCTGTTGTGATGTTGGTAACCGGCTACTTTGGTGAA---------GCA------------------GTA------TACACG------------------------------------------------------ACA---------GGC---------------------------TCATCTCCC------------------GCTCTCTGG---GGATTGGTTTCTGGCCTCGCTTATTTCTACATCGTCTATTTGATT---------------ATG------GCA---GGTGAAGCGAAGAAACTTGCTGACAAG------TCA---TCTCCAGCG---GTA---CAA---AAA---GCA---CAC---GGA---ATTCTG---TGCAAGTTTGTCTTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLILKA---A--GAKT-SL------------LWK-LIGASVVMLVTGYFGE---A------V--YT------------------T---G---------SSP------ALW-GLVSGLAYFYIVYLI-----M--A-GEAKKLADK--S-SPA-V-Q-K-A-H-G-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ928313 [II-CFB-Dokdonia] PRGD_OTU031_a1c67f0e5076808380e329363a6ee8b5 gb|KJ928313| PRGD_OTU031_a1c67f0e5076808380e329363a6ee8b5, putative proteorhodopsin gene, partial cds. PRGD_OTU031_a1c67f0e5076808380e329363a6ee8b5, putative proteorhodopsin gene, partial cds. KJ928313 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ACACTGACTGTGCCGTTGATGTGTGTAGAGTTTTACTTAATTCTGAAAGCGGCAGGAGCGCAAACCTCGTTGCTATGGAAACTCATTGGAGCTTCTGTCGTGATGTTGGTAACCGGCTACTTTGGTGAAGCCGTATACACGACAGGCGCATCTCCTGCACTTTGGGGATTGGTTTCTGGTCTCGCTTACTTCTACATTGTATACTTGATTATGGCAGGTGAAGCGAAGAAACTCGCTGACAAGTCGTCTCCATCGGTTCAAAAAGCACACGGAATCCTGTGCAAGTTTGTCTTGATT TLTVPLMCVEFYLILKAAGAQTSLLWKLIGASVVMLVTGYFGEAVYTTGASPALWGLVSGLAYFYIVYLIMAGEAKKLADKSSPSVQKAHGILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACTGACTGTGCCGTTGATGTGTGTAGAGTTTTACTTAATTCTGAAAGCG---------GCA------GGAGCGCAAACC---TCGTTG------------------------------------CTATGGAAA---CTCATTGGAGCTTCTGTCGTGATGTTGGTAACCGGCTACTTTGGTGAA---------GCC------------------GTA------TACACG------------------------------------------------------------------------------------------------ACAGGCGCA------------TCTCCTGCACTTTGG---GGATTGGTTTCTGGTCTCGCTTACTTCTACATTGTATACTTGATT---------------ATG------GCA---GGTGAAGCGAAGAAACTCGCTGACAAG------TCG---TCTCCATCG---GTT---CAA---AAA---GCA---CAC---GGA---ATCCTG---TGCAAGTTTGTCTTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLILKA---A--GAQT-SL------------LWK-LIGASVVMLVTGYFGE---A------V--YT--------------------------------TGA----SPALW-GLVSGLAYFYIVYLI-----M--A-GEAKKLADK--S-SPS-V-Q-K-A-H-G-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ928316 [II-CFB-Dokdonia] PRGD_OTU031_c8a00c8553810c02d5babf4a56468b53 gb|KJ928316| PRGD_OTU031_c8a00c8553810c02d5babf4a56468b53, putative proteorhodopsin gene, partial cds. PRGD_OTU031_c8a00c8553810c02d5babf4a56468b53, putative proteorhodopsin gene, partial cds. KJ928316 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683) ACACTTACTGTTCCATTGATGTGCGTTGAATTTTACCTAATCCTGAAAGCGGCAGGTGCTCAAACATCGTTGCTTTGGAAACTCATTGGAGCTTCCGTTGTGATGTTGGTAACTGGTTATTTCGGTGAAGCAGTATACACTACAGGTTCTTCTCCAGCTCTTTGGGGATTGGCTTCTGGTCTCGCTTACTTCTACATCGTGTATCTAATCATGGCCGGTGAGGCGAAGCAGCTCGCTGCGAAGTCTTCTCCAGCGGTACAAAAAGCACACGGTATCTTGTGCAAGTTTGTACTCATT TLTVPLMCVEFYLILKAAGAQTSLLWKLIGASVVMLVTGYFGEAVYTTGSSPALWGLASGLAYFYIVYLIMAGEAKQLAAKSSPAVQKAHGILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACTTACTGTTCCATTGATGTGCGTTGAATTTTACCTAATCCTGAAAGCG---------GCA------GGTGCTCAAACA---TCGTTG------------------------------------CTTTGGAAA---CTCATTGGAGCTTCCGTTGTGATGTTGGTAACTGGTTATTTCGGTGAA---------GCA------------------GTA------TACACT------------------------------------------------------ACA---------GGT---------------------------TCTTCTCCA------------------GCTCTTTGG---GGATTGGCTTCTGGTCTCGCTTACTTCTACATCGTGTATCTAATC---------------ATG------GCC---GGTGAGGCGAAGCAGCTCGCTGCGAAG------TCT---TCTCCAGCG---GTA---CAA---AAA---GCA---CAC---GGT---ATCTTG---TGCAAGTTTGTACTCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLILKA---A--GAQT-SL------------LWK-LIGASVVMLVTGYFGE---A------V--YT------------------T---G---------SSP------ALW-GLASGLAYFYIVYLI-----M--A-GEAKQLAAK--S-SPA-V-Q-K-A-H-G-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ928958 [II-CFB-Dokdonia] PRGD_OTU064_otuREP_058d7dec787121ea7151001544a00c0e gb|KJ928958| PRGD_OTU064_otuREP_058d7dec787121ea7151001544a00c0e, putative proteorhodopsin gene, partial cds. PRGD_OTU064_otuREP_058d7dec787121ea7151001544a00c0e, putative proteorhodopsin gene, partial cds. KJ928958 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -33.9602, -73.3769), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45) ACCCTGACCGTTCCATTGATGTGCGTTGAATTCTACCTCATCCTGAAAGCGGCTGGTGCGAAGACAGGACTGTTGTGGAAACTGATTTGGGCATCCGTTGTGATGCTTGTTACAGGATACCTCGGTGAGGCCGTCTACACAACAGGCAATGGACCAGCAGTCTGGGGATTGTTCTCCGGTATTGCTTACTTCTACATTGTTTATCTCATCATGTTCGGAGAAGCGAAGGCGTTGGCCGATAAATCTTCTGCTTCCGTCCAGCGTGCGCACAACATCCTGTGCAAGTTCGTCCTCATT TLTVPLMCVEFYLILKAAGAKTGLLWKLIWASVVMLVTGYLGEAVYTTGNGPAVWGLFSGIAYFYIVYLIMFGEAKALADKSSASVQRAHNILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCCTGACCGTTCCATTGATGTGCGTTGAATTCTACCTCATCCTGAAAGCG---------GCT------GGTGCGAAGACA---GGACTG------------------------------------TTGTGGAAA---CTGATTTGGGCATCCGTTGTGATGCTTGTTACAGGATACCTCGGTGAG---------GCC------------------GTC------TACACA------------------------------------------------------ACA---------GGC---------------------------AATGGACCA------------------GCAGTCTGG---GGATTGTTCTCCGGTATTGCTTACTTCTACATTGTTTATCTCATC---------------ATG------TTC---GGAGAAGCGAAGGCGTTGGCCGATAAA------TCT---TCTGCTTCC---GTC---CAG---CGT---GCG---CAC---AAC---ATCCTG---TGCAAGTTCGTCCTCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLILKA---A--GAKT-GL------------LWK-LIWASVVMLVTGYLGE---A------V--YT------------------T---G---------NGP------AVW-GLFSGIAYFYIVYLI-----M--F-GEAKALADK--S-SAS-V-Q-R-A-H-N-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ928968 [II-CFB-Dokdonia] PRGD_OTU064_8a02b5d466c1e34fcaaf2a782b6a1b6f gb|KJ928968| PRGD_OTU064_8a02b5d466c1e34fcaaf2a782b6a1b6f, putative proteorhodopsin gene, partial cds. PRGD_OTU064_8a02b5d466c1e34fcaaf2a782b6a1b6f, putative proteorhodopsin gene, partial cds. KJ928968 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175) ACATTAACTGTTCCGTTGATGTGTGTTGAGTTTTACCTCATTTTGAAGGCAGCAGGAGCCCAAACAGGCCTGCTGTGGAAACTCATTTGGGCTTCCGTGGTCATGCTCGTGACAGGCTACTTAGGTGAGGCCGTGTACACGACAGGAAATGGTCCAGCTGTCTGGGGTTTATTCTCAGGTATTGCCTACTTCTACATTGTGTACCTCATTATGTTCGGTGAAGCGAAGGCGCTTGCAGACAAATCTTCTGCATCCGTTCAGCGTGCGCACAGCATCTTGTGCAAATTCGTACTTATT TLTVPLMCVEFYLILKAAGAQTGLLWKLIWASVVMLVTGYLGEAVYTTGNGPAVWGLFSGIAYFYIVYLIMFGEAKALADKSSASVQRAHSILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATTAACTGTTCCGTTGATGTGTGTTGAGTTTTACCTCATTTTGAAGGCA---------GCA------GGAGCCCAAACA---GGCCTG------------------------------------CTGTGGAAA---CTCATTTGGGCTTCCGTGGTCATGCTCGTGACAGGCTACTTAGGTGAG---------GCC------------------GTG------TACACG------------------------------------------------------ACA---------GGA---------------------------AATGGTCCA------------------GCTGTCTGG---GGTTTATTCTCAGGTATTGCCTACTTCTACATTGTGTACCTCATT---------------ATG------TTC---GGTGAAGCGAAGGCGCTTGCAGACAAA------TCT---TCTGCATCC---GTT---CAG---CGT---GCG---CAC---AGC---ATCTTG---TGCAAATTCGTACTTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLILKA---A--GAQT-GL------------LWK-LIWASVVMLVTGYLGE---A------V--YT------------------T---G---------NGP------AVW-GLFSGIAYFYIVYLI-----M--F-GEAKALADK--S-SAS-V-Q-R-A-H-S-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ928960 [II-CFB-Dokdonia] PRGD_OTU064_142e7c4d4354432a435eedeef00a3004 gb|KJ928960| PRGD_OTU064_142e7c4d4354432a435eedeef00a3004, putative proteorhodopsin gene, partial cds. PRGD_OTU064_142e7c4d4354432a435eedeef00a3004, putative proteorhodopsin gene, partial cds. KJ928960 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ACGTTGACCGTTCCGTTGATGTGCGTAGAGTTCTACTTGATTTTGAAAGCAGCCGGTGCTCAGACAGGTTTGCTTTGGAAATTAATCTGGGCATCAGTCGTGATGCTTGTGACAGGTTACCTCGGAGAAGCGGTATACACCACAGGAACCGGTCCAGCAATGTGGGGCTTGTTCTCAGGTCTTGCTTACTTCTACATTGTGTACCTCATCATGTTTGGTGAAGCAAAAGCGTTGGCTGATAAGTCATCTGCTGGCGTTCAGCGTGCACACGGCATCCTCTGCAAGTTTGTCTTGATC TLTVPLMCVEFYLILKAAGAQTGLLWKLIWASVVMLVTGYLGEAVYTTGTGPAMWGLFSGLAYFYIVYLIMFGEAKALADKSSAGVQRAHGILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGTTGACCGTTCCGTTGATGTGCGTAGAGTTCTACTTGATTTTGAAAGCA---------GCC------GGTGCTCAGACA---GGTTTG------------------------------------CTTTGGAAA---TTAATCTGGGCATCAGTCGTGATGCTTGTGACAGGTTACCTCGGAGAA---------GCG------------------GTA------TACACC------------------------------------------------------ACA---------GGA---------------------------ACCGGTCCA------------------GCAATGTGG---GGCTTGTTCTCAGGTCTTGCTTACTTCTACATTGTGTACCTCATC---------------ATG------TTT---GGTGAAGCAAAAGCGTTGGCTGATAAG------TCA---TCTGCTGGC---GTT---CAG---CGT---GCA---CAC---GGC---ATCCTC---TGCAAGTTTGTCTTGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLILKA---A--GAQT-GL------------LWK-LIWASVVMLVTGYLGE---A------V--YT------------------T---G---------TGP------AMW-GLFSGLAYFYIVYLI-----M--F-GEAKALADK--S-SAG-V-Q-R-A-H-G-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ928962 [II-CFB-Dokdonia] PRGD_OTU064_2a5b979c1bf11c1568da2acb3136612c gb|KJ928962| PRGD_OTU064_2a5b979c1bf11c1568da2acb3136612c, putative proteorhodopsin gene, partial cds. PRGD_OTU064_2a5b979c1bf11c1568da2acb3136612c, putative proteorhodopsin gene, partial cds. KJ928962 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ACGTTGACCGTTCCGTTGATGTGCGTAGAGTTCTACTTGATTTTGAAAGCAGCCGGTGCTCAGACAGGTTTGCTTTGGAAATTGATTTGGGCATCAGTCGTGATGCTTGTGACAGGTTACCTCGGAGAAGCGGTATACACCACAGGAACCGGTCCAGCAATGTGGGGCTTGTTCTCAGGTCTTGCTTACTTCTACATTGTGTACCTCATCATGTTTGGTGAAGCAAAAGCGTTGGCTGATAAGTCATCTGCTGGCGTTCAGCGTGCACACGGCATCCTCTGCAAGTTTGTCTTGATC TLTVPLMCVEFYLILKAAGAQTGLLWKLIWASVVMLVTGYLGEAVYTTGTGPAMWGLFSGLAYFYIVYLIMFGEAKALADKSSAGVQRAHGILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGTTGACCGTTCCGTTGATGTGCGTAGAGTTCTACTTGATTTTGAAAGCA---------GCC------GGTGCTCAGACA---GGTTTG------------------------------------CTTTGGAAA---TTGATTTGGGCATCAGTCGTGATGCTTGTGACAGGTTACCTCGGAGAA---------GCG------------------GTA------TACACC------------------------------------------------------ACA---------GGA---------------------------ACCGGTCCA------------------GCAATGTGG---GGCTTGTTCTCAGGTCTTGCTTACTTCTACATTGTGTACCTCATC---------------ATG------TTT---GGTGAAGCAAAAGCGTTGGCTGATAAG------TCA---TCTGCTGGC---GTT---CAG---CGT---GCA---CAC---GGC---ATCCTC---TGCAAGTTTGTCTTGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLILKA---A--GAQT-GL------------LWK-LIWASVVMLVTGYLGE---A------V--YT------------------T---G---------TGP------AMW-GLFSGLAYFYIVYLI-----M--F-GEAKALADK--S-SAG-V-Q-R-A-H-G-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ928961 [II-CFB-Dokdonia] PRGD_OTU064_22a87ae8ad64dae2ee5ca5672dfbff4d gb|KJ928961| PRGD_OTU064_22a87ae8ad64dae2ee5ca5672dfbff4d, putative proteorhodopsin gene, partial cds. PRGD_OTU064_22a87ae8ad64dae2ee5ca5672dfbff4d, putative proteorhodopsin gene, partial cds. KJ928961 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) ACATTGACTGTTCCGTTGATGTGCGTTGAATTCTACCTCATCCTCAAAGCCGCTGGCGCTCAAACAGGTTTGCTTTGGAAGCTCATCTGGGCTTCAGTTGTAATGCTCGTCACCGGATACATGGGTGAGGCAGTTTACACGACTGGAACAGGACCTGCTTTGTGGGGATTGATTTCTGGTATCGCGTACTTCTACATTGTATACCTCATCATGTTTGGTGAAGCAAAAGCCTTGGCAGACAAGTCTTCTGCTTCTGTGCAGCGCGCCCACGGCATCCTGTGCAAGTTTGTCCTCATT TLTVPLMCVEFYLILKAAGAQTGLLWKLIWASVVMLVTGYMGEAVYTTGTGPALWGLISGIAYFYIVYLIMFGEAKALADKSSASVQRAHGILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATTGACTGTTCCGTTGATGTGCGTTGAATTCTACCTCATCCTCAAAGCC---------GCT------GGCGCTCAAACA---GGTTTG------------------------------------CTTTGGAAG---CTCATCTGGGCTTCAGTTGTAATGCTCGTCACCGGATACATGGGTGAG---------GCA------------------GTT------TACACG------------------------------------------------------ACT---------GGA---------------------------ACAGGACCT------------------GCTTTGTGG---GGATTGATTTCTGGTATCGCGTACTTCTACATTGTATACCTCATC---------------ATG------TTT---GGTGAAGCAAAAGCCTTGGCAGACAAG------TCT---TCTGCTTCT---GTG---CAG---CGC---GCC---CAC---GGC---ATCCTG---TGCAAGTTTGTCCTCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLILKA---A--GAQT-GL------------LWK-LIWASVVMLVTGYMGE---A------V--YT------------------T---G---------TGP------ALW-GLISGIAYFYIVYLI-----M--F-GEAKALADK--S-SAS-V-Q-R-A-H-G-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ928967 [II-CFB-Dokdonia] PRGD_OTU064_707fb593c7dac8021ecaffd8775bc285 gb|KJ928967| PRGD_OTU064_707fb593c7dac8021ecaffd8775bc285, putative proteorhodopsin gene, partial cds. PRGD_OTU064_707fb593c7dac8021ecaffd8775bc285, putative proteorhodopsin gene, partial cds. KJ928967 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ACATTGACTGTTCCGTTGATGTGCGTTGAATTCTACCTCATCCTCAAAGCCGCTGGCGCTCAAACAGGTTTGCTTTGGAAGCTCATCTGGGCTTCAGTTGTAATGCTGGTCACCGGATACATGGGTGAGGCAGTTTACACTACTGGAACAGGACCTGCTTTGTGGGGATTGATTTCTGGTATCGCGTACTTCTACATTGTATACCTCATCATGTTTGGTGAAGCAAAAGCCTTGGCAGACAAGTCTTCTGCTTCTGTGCAGCGCGCCCATGGCATCCTGTGCAAGTTTGTCCTCATT TLTVPLMCVEFYLILKAAGAQTGLLWKLIWASVVMLVTGYMGEAVYTTGTGPALWGLISGIAYFYIVYLIMFGEAKALADKSSASVQRAHGILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATTGACTGTTCCGTTGATGTGCGTTGAATTCTACCTCATCCTCAAAGCC---------GCT------GGCGCTCAAACA---GGTTTG------------------------------------CTTTGGAAG---CTCATCTGGGCTTCAGTTGTAATGCTGGTCACCGGATACATGGGTGAG---------GCA------------------GTT------TACACT------------------------------------------------------ACT---------GGA---------------------------ACAGGACCT------------------GCTTTGTGG---GGATTGATTTCTGGTATCGCGTACTTCTACATTGTATACCTCATC---------------ATG------TTT---GGTGAAGCAAAAGCCTTGGCAGACAAG------TCT---TCTGCTTCT---GTG---CAG---CGC---GCC---CAT---GGC---ATCCTG---TGCAAGTTTGTCCTCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLILKA---A--GAQT-GL------------LWK-LIWASVVMLVTGYMGE---A------V--YT------------------T---G---------TGP------ALW-GLISGIAYFYIVYLI-----M--F-GEAKALADK--S-SAS-V-Q-R-A-H-G-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ928963 [II-CFB-Dokdonia] PRGD_OTU064_3d61f4ce73dfab93ca8f81efa2543e57 gb|KJ928963| PRGD_OTU064_3d61f4ce73dfab93ca8f81efa2543e57, putative proteorhodopsin gene, partial cds. PRGD_OTU064_3d61f4ce73dfab93ca8f81efa2543e57, putative proteorhodopsin gene, partial cds. KJ928963 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683) ACATTGACTGTTCCGTTGATGTGCGTTGAATTCTACCTCATCCTCAAAGCCGCAGGTGCACAAACTGGCTTGCTCTGGAAGCTCATCTGGGCTTCAGTTGTAATGCTGGTCACAGGATACATGGGTGAGGCAGTATACACGACTGGAACAGGGCCTGCTCTGTGGGGATTGATTTCCGGCATCGCGTATTTCTACATTGTTTACCTCATCATGTTTGGTGAAGCAAAAGCCTTGGCAGACAAGTCTTCTGCTTCAGTGCAACGCGCTCATGGCATCCTATGCAAGTTTGTCCTCATT TLTVPLMCVEFYLILKAAGAQTGLLWKLIWASVVMLVTGYMGEAVYTTGTGPALWGLISGIAYFYIVYLIMFGEAKALADKSSASVQRAHGILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATTGACTGTTCCGTTGATGTGCGTTGAATTCTACCTCATCCTCAAAGCC---------GCA------GGTGCACAAACT---GGCTTG------------------------------------CTCTGGAAG---CTCATCTGGGCTTCAGTTGTAATGCTGGTCACAGGATACATGGGTGAG---------GCA------------------GTA------TACACG------------------------------------------------------ACT---------GGA---------------------------ACAGGGCCT------------------GCTCTGTGG---GGATTGATTTCCGGCATCGCGTATTTCTACATTGTTTACCTCATC---------------ATG------TTT---GGTGAAGCAAAAGCCTTGGCAGACAAG------TCT---TCTGCTTCA---GTG---CAA---CGC---GCT---CAT---GGC---ATCCTA---TGCAAGTTTGTCCTCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLILKA---A--GAQT-GL------------LWK-LIWASVVMLVTGYMGE---A------V--YT------------------T---G---------TGP------ALW-GLISGIAYFYIVYLI-----M--F-GEAKALADK--S-SAS-V-Q-R-A-H-G-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ928970 [II-CFB-Dokdonia] PRGD_OTU064_f06ff0ed3e3a8032449953dea9559a34 gb|KJ928970| PRGD_OTU064_f06ff0ed3e3a8032449953dea9559a34, putative proteorhodopsin gene, partial cds. PRGD_OTU064_f06ff0ed3e3a8032449953dea9559a34, putative proteorhodopsin gene, partial cds. KJ928970 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) ACATTGACAGTTCCGTTAATGTGCGTTGAATTTTACCTCATCCTCAAAGCCGCAGGTGCACAAACTGGCTTGCTCTGGAAGCTCATCTGGGCTTCAGTTGTAATGCTGGTCACAGGATACATGGGTGAGGCCGTATACACGACTGGAACAGGGCCTGCTCTGTGGGGATTGATTTCCGGCATCGCGTATTTCTACATTGTTTACCTCATCATGTTTGGTGAAGCAAAAGCCTTGGCAGACAAGTCTTCTGCTTCAGTGCAACGCGCTCATGGCATCCTATGCAAGTTTGTCCTCATT TLTVPLMCVEFYLILKAAGAQTGLLWKLIWASVVMLVTGYMGEAVYTTGTGPALWGLISGIAYFYIVYLIMFGEAKALADKSSASVQRAHGILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATTGACAGTTCCGTTAATGTGCGTTGAATTTTACCTCATCCTCAAAGCC---------GCA------GGTGCACAAACT---GGCTTG------------------------------------CTCTGGAAG---CTCATCTGGGCTTCAGTTGTAATGCTGGTCACAGGATACATGGGTGAG---------GCC------------------GTA------TACACG------------------------------------------------------ACT---------GGA---------------------------ACAGGGCCT------------------GCTCTGTGG---GGATTGATTTCCGGCATCGCGTATTTCTACATTGTTTACCTCATC---------------ATG------TTT---GGTGAAGCAAAAGCCTTGGCAGACAAG------TCT---TCTGCTTCA---GTG---CAA---CGC---GCT---CAT---GGC---ATCCTA---TGCAAGTTTGTCCTCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLILKA---A--GAQT-GL------------LWK-LIWASVVMLVTGYMGE---A------V--YT------------------T---G---------TGP------ALW-GLISGIAYFYIVYLI-----M--F-GEAKALADK--S-SAS-V-Q-R-A-H-G-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ928965 [II-CFB-Dokdonia] PRGD_OTU064_4afa3a700e016ad76c37777a9a0c0e22 gb|KJ928965| PRGD_OTU064_4afa3a700e016ad76c37777a9a0c0e22, putative proteorhodopsin gene, partial cds. PRGD_OTU064_4afa3a700e016ad76c37777a9a0c0e22, putative proteorhodopsin gene, partial cds. KJ928965 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ACATTGACTGTCCCATTGATGTGCGTTGAATTTTATCTCATCCTGAAGGCAGCCGGTGCTAAGACTGGTCTTCTTTGGAAACTCATCTGGGCATCTGTAGTGATGTTGGTGACGGGTTACCTAGGAGAGGCAGTATACAACACTGGAACTGGTCCTGCTATGTGGGGATTGTTCTCTGGTATTGCTTACTTCTACATTGTTTATCTCATCATGTTTGGCGAGGCAAAGGCATTGGCAGACAAGTCGTCCGCTTCAGTGCAGCGCGCTCACAACATTTTGTGCAAGTTTGTCCTCATC TLTVPLMCVEFYLILKAAGAKTGLLWKLIWASVVMLVTGYLGEAVYNTGTGPAMWGLFSGIAYFYIVYLIMFGEAKALADKSSASVQRAHNILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATTGACTGTCCCATTGATGTGCGTTGAATTTTATCTCATCCTGAAGGCA---------GCC------GGTGCTAAGACT---GGTCTT------------------------------------CTTTGGAAA---CTCATCTGGGCATCTGTAGTGATGTTGGTGACGGGTTACCTAGGAGAG---------GCA------------------GTA------TACAAC------------------------------------------------------ACT---------GGA---------------------------ACTGGTCCT------------------GCTATGTGG---GGATTGTTCTCTGGTATTGCTTACTTCTACATTGTTTATCTCATC---------------ATG------TTT---GGCGAGGCAAAGGCATTGGCAGACAAG------TCG---TCCGCTTCA---GTG---CAG---CGC---GCT---CAC---AAC---ATTTTG---TGCAAGTTTGTCCTCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLILKA---A--GAKT-GL------------LWK-LIWASVVMLVTGYLGE---A------V--YN------------------T---G---------TGP------AMW-GLFSGIAYFYIVYLI-----M--F-GEAKALADK--S-SAS-V-Q-R-A-H-N-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ928971 [II-CFB-Dokdonia] PRGD_OTU064_f197501b83ddb110d2a0c40f608e7895 gb|KJ928971| PRGD_OTU064_f197501b83ddb110d2a0c40f608e7895, putative proteorhodopsin gene, partial cds. PRGD_OTU064_f197501b83ddb110d2a0c40f608e7895, putative proteorhodopsin gene, partial cds. KJ928971 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 01-juil-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-14.48, 113.45) ACATTGACTGTCCCATTGATGTGCGTTGAATTTTATCTCATCCTGAAGGCAGCCGGTGCTAAGACTGGTCTTCTTTGGAAACTCATCTGGGCATCTGTAGTGATGTTGGTAACGGGTTACCTAGGAGAGGCAGTATACAACACTGGAACTGGTCCTGCTATGTGGGGATTGTTCTCTGGTATTGCTTACTTCTACATTGTTTATCTCATCATGTTCGGCGAGGCAAAGGCATTGGCAGACAAGTCGTCCGCTTCAGTGCAGCGCGCTCACAACATTTTGTGCAAGTTTGTCCTCATC TLTVPLMCVEFYLILKAAGAKTGLLWKLIWASVVMLVTGYLGEAVYNTGTGPAMWGLFSGIAYFYIVYLIMFGEAKALADKSSASVQRAHNILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATTGACTGTCCCATTGATGTGCGTTGAATTTTATCTCATCCTGAAGGCA---------GCC------GGTGCTAAGACT---GGTCTT------------------------------------CTTTGGAAA---CTCATCTGGGCATCTGTAGTGATGTTGGTAACGGGTTACCTAGGAGAG---------GCA------------------GTA------TACAAC------------------------------------------------------ACT---------GGA---------------------------ACTGGTCCT------------------GCTATGTGG---GGATTGTTCTCTGGTATTGCTTACTTCTACATTGTTTATCTCATC---------------ATG------TTC---GGCGAGGCAAAGGCATTGGCAGACAAG------TCG---TCCGCTTCA---GTG---CAG---CGC---GCT---CAC---AAC---ATTTTG---TGCAAGTTTGTCCTCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLILKA---A--GAKT-GL------------LWK-LIWASVVMLVTGYLGE---A------V--YN------------------T---G---------TGP------AMW-GLFSGIAYFYIVYLI-----M--F-GEAKALADK--S-SAS-V-Q-R-A-H-N-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ928959 [II-CFB-Dokdonia] PRGD_OTU064_140fe46d34df854ab862c04353934db8 gb|KJ928959| PRGD_OTU064_140fe46d34df854ab862c04353934db8, putative proteorhodopsin gene, partial cds. PRGD_OTU064_140fe46d34df854ab862c04353934db8, putative proteorhodopsin gene, partial cds. KJ928959 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683) ACATTGACTGTTCCGTTGATGTGCGTTGAATTCTACCTCATCCTGAAAGCGGCGGGTGCTCAAACAGGTTTGCTTTGGAAGCTCATCTGGGCTTCAGTAGTGATGCTAGTAACGGGTTATGTGGGAGAAGCAGTATATGCTGATCAAGCCGCTCTATGGGGCTTATTCTCAGGTATTGCATACTTCTACATTGTTTACCTCATCATGTTTGGCGAGGCGAAAGCATTGGCGGATAAGTCTTCTGCATCCGTTCAAAAGGCACACGGCATTTTATGCAAATTCGTTCTCATT TLTVPLMCVEFYLILKAAGAQTGLLWKLIWASVVMLVTGYVGEAVYADQAALWGLFSGIAYFYIVYLIMFGEAKALADKSSASVQKAHGILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATTGACTGTTCCGTTGATGTGCGTTGAATTCTACCTCATCCTGAAAGCG---------GCG------GGTGCTCAAACA---GGTTTG------------------------------------CTTTGGAAG---CTCATCTGGGCTTCAGTAGTGATGCTAGTAACGGGTTATGTGGGAGAA---------GCA------------------GTA------TATGCT------------------------------------------------------------------------------------------------GATCAAGCC------------------GCTCTATGG---GGCTTATTCTCAGGTATTGCATACTTCTACATTGTTTACCTCATC---------------ATG------TTT---GGCGAGGCGAAAGCATTGGCGGATAAG------TCT---TCTGCATCC---GTT---CAA---AAG---GCA---CAC---GGC---ATTTTA---TGCAAATTCGTTCTCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLILKA---A--GAQT-GL------------LWK-LIWASVVMLVTGYVGE---A------V--YA--------------------------------DQA------ALW-GLFSGIAYFYIVYLI-----M--F-GEAKALADK--S-SAS-V-Q-K-A-H-G-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ928966 [II-CFB-Dokdonia] PRGD_OTU064_552be8bc3e62d948e17e8a23a001b235 gb|KJ928966| PRGD_OTU064_552be8bc3e62d948e17e8a23a001b235, putative proteorhodopsin gene, partial cds. PRGD_OTU064_552be8bc3e62d948e17e8a23a001b235, putative proteorhodopsin gene, partial cds. KJ928966 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), North Pacific Ocean (50.06, -139.53), Indian Ocean (-14.48, 113.45) ACATTGACTGTTCCATTGATGTGTGTTGAATTTTACCTCATCCTCAAGGCAGCCGGCGCTCAGACTGGCCTGCTATGGAAGCTCATTTGGGCATCTGTTGTGATGCTTGTAACCGGTTATATCGGAGAGGCAGTATACCCAGGCCAAGCCGCTATGTGGGGCTTATTCTCAGGTATTGCATACTTCTACATTGTTTACCTCATCATGTTTGGTGAAGCGAAAGCATTGGCTGACAAGTCTTCTGCATCTGTACAGAAAGCACACGGCATTTTGTGCAAGTTTGTTCTCATT TLTVPLMCVEFYLILKAAGAQTGLLWKLIWASVVMLVTGYIGEAVYPGQAAMWGLFSGIAYFYIVYLIMFGEAKALADKSSASVQKAHGILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATTGACTGTTCCATTGATGTGTGTTGAATTTTACCTCATCCTCAAGGCA---------GCC------GGCGCTCAGACT---GGCCTG------------------------------------CTATGGAAG---CTCATTTGGGCATCTGTTGTGATGCTTGTAACCGGTTATATCGGAGAG---------GCA------------------GTA------TACCCA------------------------------------------------------------------------------------------------GGCCAAGCC------------------GCTATGTGG---GGCTTATTCTCAGGTATTGCATACTTCTACATTGTTTACCTCATC---------------ATG------TTT---GGTGAAGCGAAAGCATTGGCTGACAAG------TCT---TCTGCATCT---GTA---CAG---AAA---GCA---CAC---GGC---ATTTTG---TGCAAGTTTGTTCTCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLILKA---A--GAQT-GL------------LWK-LIWASVVMLVTGYIGE---A------V--YP--------------------------------GQA------AMW-GLFSGIAYFYIVYLI-----M--F-GEAKALADK--S-SAS-V-Q-K-A-H-G-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ928964 [II-CFB-Dokdonia] PRGD_OTU064_45ff0ce5df4d459e3919ad6a9688e6ce gb|KJ928964| PRGD_OTU064_45ff0ce5df4d459e3919ad6a9688e6ce, putative proteorhodopsin gene, partial cds. PRGD_OTU064_45ff0ce5df4d459e3919ad6a9688e6ce, putative proteorhodopsin gene, partial cds. KJ928964 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) ACGTTGACCGTTCCTTTGATGTGCGTTGAGTTCTACCTCATCCTCAAAGCAGCCGGTGCGCAGACAGGTCTCCTATGGAAATTAATCTGGGCTTCAGTGGTAATGCTCGTAACTGGTTATATCGGTGAGGCTGTATACCCTGGTCAAGCTGCAATGTGGGGATTGTTCTCAGGCATTGCTTATTTCTACATCGTTTACCTCATCATGTTCGGAGAAGCCAAAGCTTTGGCTGACAAGTCATCTGCATCTGTGCAGAAAGCACATGGAATCCTGTGCAAGTTTGTCCTCATC TLTVPLMCVEFYLILKAAGAQTGLLWKLIWASVVMLVTGYIGEAVYPGQAAMWGLFSGIAYFYIVYLIMFGEAKALADKSSASVQKAHGILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGTTGACCGTTCCTTTGATGTGCGTTGAGTTCTACCTCATCCTCAAAGCA---------GCC------GGTGCGCAGACA---GGTCTC------------------------------------CTATGGAAA---TTAATCTGGGCTTCAGTGGTAATGCTCGTAACTGGTTATATCGGTGAG---------GCT------------------GTA------TACCCT------------------------------------------------------------------------------------------------GGTCAAGCT------------------GCAATGTGG---GGATTGTTCTCAGGCATTGCTTATTTCTACATCGTTTACCTCATC---------------ATG------TTC---GGAGAAGCCAAAGCTTTGGCTGACAAG------TCA---TCTGCATCT---GTG---CAG---AAA---GCA---CAT---GGA---ATCCTG---TGCAAGTTTGTCCTCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLILKA---A--GAQT-GL------------LWK-LIWASVVMLVTGYIGE---A------V--YP--------------------------------GQA------AMW-GLFSGIAYFYIVYLI-----M--F-GEAKALADK--S-SAS-V-Q-K-A-H-G-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ928969 [II-CFB-Dokdonia] PRGD_OTU064_c3f4d45b350ed3915f889aa9de4792d4 gb|KJ928969| PRGD_OTU064_c3f4d45b350ed3915f889aa9de4792d4, putative proteorhodopsin gene, partial cds. PRGD_OTU064_c3f4d45b350ed3915f889aa9de4792d4, putative proteorhodopsin gene, partial cds. KJ928969 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), English Channel (48.7717, -3.9683) ACATTGACAGTTCCGTTGATGTGCGTTGAATTTTACCTGATCCTCAAGGCCGCTGGCGCGAAGACAGGTCTTCTCTGGAAATTGATCTGGGCTTCCGTAGTAATGCTCGTAACCGGTTACATCGGGGAGGCAGTCTACACAGACCAAGCTGCTATGTGGGGATTATTCTCAGGCATTGCATATTTCTACATTGTTTACCTCATCATGTTTGGAGAGGCAAAAGCTTTGGCTGACAAATCATCTGCATCAGTGCAACGAGCTCACGGTATTCTGTGCAAGTTCGTCCTCATC TLTVPLMCVEFYLILKAAGAKTGLLWKLIWASVVMLVTGYIGEAVYTDQAAMWGLFSGIAYFYIVYLIMFGEAKALADKSSASVQRAHGILCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATTGACAGTTCCGTTGATGTGCGTTGAATTTTACCTGATCCTCAAGGCC---------GCT------GGCGCGAAGACA---GGTCTT------------------------------------CTCTGGAAA---TTGATCTGGGCTTCCGTAGTAATGCTCGTAACCGGTTACATCGGGGAG---------GCA------------------GTC------TACACA------------------------------------------------------------------------------------------------GACCAAGCT------------------GCTATGTGG---GGATTATTCTCAGGCATTGCATATTTCTACATTGTTTACCTCATC---------------ATG------TTT---GGAGAGGCAAAAGCTTTGGCTGACAAA------TCA---TCTGCATCA---GTG---CAA---CGA---GCT---CAC---GGT---ATTCTG---TGCAAGTTCGTCCTCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLILKA---A--GAKT-GL------------LWK-LIWASVVMLVTGYIGE---A------V--YT--------------------------------DQA------AMW-GLFSGIAYFYIVYLI-----M--F-GEAKALADK--S-SAS-V-Q-R-A-H-G-IL-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ929675 [II-CFB-Dokdonia] PRGD_OTU190_041175a43b21babf05c8558152e7c4e2 gb|KJ929675| PRGD_OTU190_041175a43b21babf05c8558152e7c4e2, putative proteorhodopsin gene, partial cds. PRGD_OTU190_041175a43b21babf05c8558152e7c4e2, putative proteorhodopsin gene, partial cds. KJ929675 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) ATTCTAACTGTTCCATTAATGTGTGTTGAATTTTATCTTATACTAAAAGTTGCTGGTGCAACTAAAAGTCTTTTATGGAAACTAATCGGACTTTCAGTCGTAATGCTTGTAACTGGGTATTTCGGAGAAACAATGGGCAACGCTGTTATGTGGGGTACTATTTCAGGACTTGCATATTTTGTAATTGTATACGAAATATGGCTTGGTGGTGCTGCTAAAATGGCTAAAGAAGCTGGAGGAGATGTTCTACATGCGCACAAAATTCTTTGCTGGTTCGTTTTAGTT ILTVPLMCVEFYLILKVAGATKSLLWKLIGLSVVMLVTGYFGETMGNAVMWGTISGLAYFVIVYEIWLGGAAKMAKEAGGDVLHAHKILCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTAACTGTTCCATTAATGTGTGTTGAATTTTATCTTATACTAAAAGTT---------GCT------GGTGCAACTAAA---AGTCTT------------------------------------TTATGGAAA---CTAATCGGACTTTCAGTCGTAATGCTTGTAACTGGGTATTTCGGAGAA---------ACA------------------ATG------------------------------------------------------------------------------------------------------------GGCAACGCT------------------GTTATGTGG---GGTACTATTTCAGGACTTGCATATTTTGTAATTGTATACGAAATA---------------TGG------CTT---GGTGGTGCTGCTAAAATGGCTAAAGAA------GCT---GGAGGAGAT---GTT---CTA---CAT---GCG---CAC---AAA---ATTCTT---TGCTGGTTCGTTTTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-SL------------LWK-LIGLSVVMLVTGYFGE---T------M------------------------------------GNA------VMW-GTISGLAYFVIVYEI-----W--L-GGAAKMAKE--A-GGD-V-L-H-A-H-K-IL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ929674 [II-CFB-Dokdonia] PRGD_OTU190_otuREP_2db346f52dbe4e6d3cff7e778fae36b7 gb|KJ929674| PRGD_OTU190_otuREP_2db346f52dbe4e6d3cff7e778fae36b7, putative proteorhodopsin gene, partial cds. PRGD_OTU190_otuREP_2db346f52dbe4e6d3cff7e778fae36b7, putative proteorhodopsin gene, partial cds. KJ929674 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) ATCCTTACTGTTCCATTAATGTGTGTTGAATTCTATCTTATACTTAAGGTTGCTGGTGCAACTAAAAGTCTTCTTTGGAAACTAATCGGACTTTCAGTTGTAATGCTTGTAACTGGATATTTCGGTGAAACAATGGGCAACGCTGTTATGTGGGGTACTGTTTCTGGAATTGCATATTTTATAATTGTATACGAAATATGGCTTGGTGGAGCTGCTAAAATGGCTAAAGAAGCTGGAGGTGATGTTCTACATGCACACAAAATTCTATGCTGGTTCGTTTTAGTT ILTVPLMCVEFYLILKVAGATKSLLWKLIGLSVVMLVTGYFGETMGNAVMWGTVSGIAYFIIVYEIWLGGAAKMAKEAGGDVLHAHKILCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCTTACTGTTCCATTAATGTGTGTTGAATTCTATCTTATACTTAAGGTT---------GCT------GGTGCAACTAAA---AGTCTT------------------------------------CTTTGGAAA---CTAATCGGACTTTCAGTTGTAATGCTTGTAACTGGATATTTCGGTGAA---------ACA------------------ATG------GGC------------------------------------------------------------------------------------------------------AACGCT------------------GTTATGTGG---GGTACTGTTTCTGGAATTGCATATTTTATAATTGTATACGAAATA---------------TGG------CTT---GGTGGAGCTGCTAAAATGGCTAAAGAA------GCT---GGAGGTGAT---GTT---CTA---CAT---GCA---CAC---AAA---ATTCTA---TGCTGGTTCGTTTTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-SL------------LWK-LIGLSVVMLVTGYFGE---T------M--G----------------------------------NA------VMW-GTVSGIAYFIIVYEI-----W--L-GGAAKMAKE--A-GGD-V-L-H-A-H-K-IL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ929676 [II-CFB-Dokdonia] PRGD_OTU190_69e9eb6fc796d2d41a5438b6ea304516 gb|KJ929676| PRGD_OTU190_69e9eb6fc796d2d41a5438b6ea304516, putative proteorhodopsin gene, partial cds. PRGD_OTU190_69e9eb6fc796d2d41a5438b6ea304516, putative proteorhodopsin gene, partial cds. KJ929676 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) ATTCTTACAGTACCATTAATGTGTGTTGAATTCTATTTGATTCTTAAGGTGGCTGGTGCTACAAAAACGTTACTTAATAAGATGATTTTATTATCTATTATTATGCTTGTAACTGGTTACATTGGAGAATCTGGAGGAGACGCAGTAATCTGGGGTACTATTTCAGGTATTGCTTATTTCGTGATTGTTTATGAAATCTGGTTAGGTGGAGCAGCAAAATTAGCTAAAGAAGCTGGTGGAGATGTATTACATGCTCACAAAATCCTTTGCTGGTTTGTACTTGTT ILTVPLMCVEFYLILKVAGATKTLLNKMILLSIIMLVTGYIGESGGDAVIWGTISGIAYFVIVYEIWLGGAAKLAKEAGGDVLHAHKILCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTACAGTACCATTAATGTGTGTTGAATTCTATTTGATTCTTAAGGTG---------GCT------GGTGCTACAAAA---ACGTTA------------------------------------CTTAATAAG---ATGATTTTATTATCTATTATTATGCTTGTAACTGGTTACATTGGAGAA---------TCT---------------------------------------------------------------------------------------------------GGA---------------------------GGAGACGCA------------------GTAATCTGG---GGTACTATTTCAGGTATTGCTTATTTCGTGATTGTTTATGAAATC---------------TGG------TTA---GGTGGAGCAGCAAAATTAGCTAAAGAA------GCT---GGTGGAGAT---GTA---TTA---CAT---GCT---CAC---AAA---ATCCTT---TGCTGGTTTGTACTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-TL------------LNK-MILLSIIMLVTGYIGE---S---------------------------------G---------GDA------VIW-GTISGIAYFVIVYEI-----W--L-GGAAKLAKE--A-GGD-V-L-H-A-H-K-IL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ929544 [II-CFB-Dokdonia] PRGD_OTU149b_otuREP_3360d11130d3b44c8d359376e86ef92c gb|KJ929544| PRGD_OTU149b_otuREP_3360d11130d3b44c8d359376e86ef92c, putative proteorhodopsin gene, partial cds. PRGD_OTU149b_otuREP_3360d11130d3b44c8d359376e86ef92c, putative proteorhodopsin gene, partial cds. KJ929544 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Bering strait marine 67.49 -168.12 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683) ATTTTAACAGTCCCATTAATGTGTGTAGAGTTCTACCTCATCCTTAAGGTGGCTGGAGCTAAGAAATCACTTATGTGGAGATTGATATTTTTATCAGTAATCATGCTTGTAACAGGATACATCGGAGAAGGTGTTGACCAAGCTAATGCCGCAATATGGGGCTTAGTATCTGGTATTGCCTACTTTGGAATTGTATACGAAATTTGGCTTGGTGGCGCAGCAAAACTTGCAAAAGAAGCTGGCGGATCGATTCAAAGTTCTCACAAAATCTTATGCTGGTTTGTATTGGTT ILTVPLMCVEFYLILKVAGAKKSLMWRLIFLSVIMLVTGYIGEGVDQANAAIWGLVSGIAYFGIVYEIWLGGAAKLAKEAGGSIQSSHKILCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACAGTCCCATTAATGTGTGTAGAGTTCTACCTCATCCTTAAGGTG---------GCT------GGAGCTAAGAAA---TCACTT------------------------------------ATGTGGAGA---TTGATATTTTTATCAGTAATCATGCTTGTAACAGGATACATCGGAGAA---------GGT------------------GTT------GACCAA------------------------------------------------------------------------------------------------GCTAATGCC------------------GCAATATGG---GGCTTAGTATCTGGTATTGCCTACTTTGGAATTGTATACGAAATT---------------TGG------CTT---GGTGGCGCAGCAAAACTTGCAAAAGAA------GCT---GGCGGATCG---ATT---CAA---AGT---TCT---CAC---AAA---ATCTTA---TGCTGGTTTGTATTGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GAKK-SL------------MWR-LIFLSVIMLVTGYIGE---G------V--DQ--------------------------------ANA------AIW-GLVSGIAYFGIVYEI-----W--L-GGAAKLAKE--A-GGS-I-Q-S-S-H-K-IL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ929545 [II-CFB-Dokdonia] PRGD_OTU149b_d04e19d99f0c62406e271af93eceb04e gb|KJ929545| PRGD_OTU149b_d04e19d99f0c62406e271af93eceb04e, putative proteorhodopsin gene, partial cds. PRGD_OTU149b_d04e19d99f0c62406e271af93eceb04e, putative proteorhodopsin gene, partial cds. KJ929545 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185; 67.49, -168.12) ATTTTAACAGTCCCATTAATGTGTGTAGAGTTCTATCTCATCCTTAAGGTGGCTGGAGCTAAGAAATCACTCATGTGGAGATTGATATTTTTATCAGTAATCATGCTTGTAACAGGATACATCGGAGAAGGTGTTGACCAAGCTAATGCCGCAATATGGGGCTTAGTATCTGGTATTGCCTACTTTGGAATTGTATACGAAATTTGGCTTGGTGGTGCAGCAAAACTTGCAAAAGAAGCTGGCGGATCGATTCAAAGTTCTCACAAAATCTTATGCTGGTTTGTATTGGTT ILTVPLMCVEFYLILKVAGAKKSLMWRLIFLSVIMLVTGYIGEGVDQANAAIWGLVSGIAYFGIVYEIWLGGAAKLAKEAGGSIQSSHKILCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACAGTCCCATTAATGTGTGTAGAGTTCTATCTCATCCTTAAGGTG---------GCT------GGAGCTAAGAAA---TCACTC------------------------------------ATGTGGAGA---TTGATATTTTTATCAGTAATCATGCTTGTAACAGGATACATCGGAGAA---------GGT------------------GTT------GACCAA------------------------------------------------------------------------------------------------GCTAATGCC------------------GCAATATGG---GGCTTAGTATCTGGTATTGCCTACTTTGGAATTGTATACGAAATT---------------TGG------CTT---GGTGGTGCAGCAAAACTTGCAAAAGAA------GCT---GGCGGATCG---ATT---CAA---AGT---TCT---CAC---AAA---ATCTTA---TGCTGGTTTGTATTGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GAKK-SL------------MWR-LIFLSVIMLVTGYIGE---G------V--DQ--------------------------------ANA------AIW-GLVSGIAYFGIVYEI-----W--L-GGAAKLAKE--A-GGS-I-Q-S-S-H-K-IL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ929143 [II-CFB-Dokdonia] PRGD_OTU080a_otuREP_c801c1a29d4157c3291eaa786421e2db gb|KJ929143| PRGD_OTU080a_otuREP_c801c1a29d4157c3291eaa786421e2db, putative proteorhodopsin gene, partial cds. PRGD_OTU080a_otuREP_c801c1a29d4157c3291eaa786421e2db, putative proteorhodopsin gene, partial cds. KJ929143 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) GTTCTTACTGTACCACTTATGTGTGTTGAGTTTTTCCTAATACTAAAAGTTGCAGGAGCTAAAAAGTCACTTATGTGGAGACTGATTTTCTTATCTGTTGTTATGCTAGTAACCGGATACATAGGTGAGGCTGTAGACAGAGATAATGCGTGGCTATGGGGATTAATCTCTGGAGCGGCATACTTTGTAATTGTTTATGACATCTGGCTAGGAAGCGCAAAAAAGCTTGCTGTAAAAGCAGGTGGAGCTGTACTAAGCGCACACAAAACCCTATGTTGGTTTGTTCTTGTG VLTVPLMCVEFFLILKVAGAKKSLMWRLIFLSVVMLVTGYIGEAVDRDNAWLWGLISGAAYFVIVYDIWLGSAKKLAVKAGGAVLSAHKTLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTCTTACTGTACCACTTATGTGTGTTGAGTTTTTCCTAATACTAAAAGTT---------GCA------GGAGCTAAAAAG---TCACTT------------------------------------ATGTGGAGA---CTGATTTTCTTATCTGTTGTTATGCTAGTAACCGGATACATAGGTGAG---------GCT------------------GTA------GACAGA------------------------------------------------------------------------------------------------GATAATGCG------------------TGGCTATGG---GGATTAATCTCTGGAGCGGCATACTTTGTAATTGTTTATGACATC---------------TGG------CTA---GGAAGCGCAAAAAAGCTTGCTGTAAAA------GCA---GGTGGAGCT---GTA---CTA---AGC---GCA---CAC---AAA---ACCCTA---TGTTGGTTTGTTCTTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFFLILKV---A--GAKK-SL------------MWR-LIFLSVVMLVTGYIGE---A------V--DR--------------------------------DNA------WLW-GLISGAAYFVIVYDI-----W--L-GSAKKLAVK--A-GGA-V-L-S-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ929147 [II-CFB-Dokdonia] PRGD_OTU080a_e5b057a0539d4e614a1e7526d2c026f5 gb|KJ929147| PRGD_OTU080a_e5b057a0539d4e614a1e7526d2c026f5, putative proteorhodopsin gene, partial cds. PRGD_OTU080a_e5b057a0539d4e614a1e7526d2c026f5, putative proteorhodopsin gene, partial cds. KJ929147 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) GTATTAACCGTACCATTAATGTGTGTTGAATTTTATTTAATTCTTAAAGTAGCTGGAGCGAAAAAATCGTTAATGTGGAGAATGATTTTCTTATCTGTAGTCATGTTAGTTACAGGATACATTGGTGAAGTTTTAAGCAGAGACAATGCTTGGTTATGGGGTCTTCTATCTGGAGCTGCATACTTTGTAATCGTTTATGACATCTGGTTAGGTAGTGCGAAAAAATTAGCTGTTGAGGCTGGAGGAGCTGTTTTACAAGCTCACAAAGCACTTTGCTGGTTTGTATTAGTT VLTVPLMCVEFYLILKVAGAKKSLMWRMIFLSVVMLVTGYIGEVLSRDNAWLWGLLSGAAYFVIVYDIWLGSAKKLAVEAGGAVLQAHKALCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAACCGTACCATTAATGTGTGTTGAATTTTATTTAATTCTTAAAGTA---------GCT------GGAGCGAAAAAA---TCGTTA------------------------------------ATGTGGAGA---ATGATTTTCTTATCTGTAGTCATGTTAGTTACAGGATACATTGGTGAA---------GTT------------------TTA------AGCAGA------------------------------------------------------------------------------------------------GACAATGCT------------------TGGTTATGG---GGTCTTCTATCTGGAGCTGCATACTTTGTAATCGTTTATGACATC---------------TGG------TTA---GGTAGTGCGAAAAAATTAGCTGTTGAG------GCT---GGAGGAGCT---GTT---TTA---CAA---GCT---CAC---AAA---GCACTT---TGCTGGTTTGTATTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKV---A--GAKK-SL------------MWR-MIFLSVVMLVTGYIGE---V------L--SR--------------------------------DNA------WLW-GLLSGAAYFVIVYDI-----W--L-GSAKKLAVE--A-GGA-V-L-Q-A-H-K-AL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ929148 [II-CFB-Dokdonia] PRGD_OTU080a_fdd0dbade9633c9fd822a9e21b8a4391 gb|KJ929148| PRGD_OTU080a_fdd0dbade9633c9fd822a9e21b8a4391, putative proteorhodopsin gene, partial cds. PRGD_OTU080a_fdd0dbade9633c9fd822a9e21b8a4391, putative proteorhodopsin gene, partial cds. KJ929148 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683) GTATTAACCGTACCTTTAATGTGTGTTGAATTTTATTTAATTCTTAAAGTAGCTGGAGCCAAAAAGTCGTTAATGTGGAGAATGATCTTCTTATCTGTAATCATGTTAGTTACAGGATACATTGGTGAAGTTTTAAGCCGAGATAATGCTTGGTTATGGGGACTTCTATCCGGAGCTGCATACTTTGTTATCGTTTATGACATCTGGTTAGGTAGTGCAAAAAAATTAGCTGTTGAGGCTGGAGGAGCTGTTTTACAAGCTCACAAAGCTCTTTGCTGGTTTGTATTAGTT VLTVPLMCVEFYLILKVAGAKKSLMWRMIFLSVIMLVTGYIGEVLSRDNAWLWGLLSGAAYFVIVYDIWLGSAKKLAVEAGGAVLQAHKALCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAACCGTACCTTTAATGTGTGTTGAATTTTATTTAATTCTTAAAGTA---------GCT------GGAGCCAAAAAG---TCGTTA------------------------------------ATGTGGAGA---ATGATCTTCTTATCTGTAATCATGTTAGTTACAGGATACATTGGTGAA---------GTT------------------TTA------AGCCGA------------------------------------------------------------------------------------------------GATAATGCT------------------TGGTTATGG---GGACTTCTATCCGGAGCTGCATACTTTGTTATCGTTTATGACATC---------------TGG------TTA---GGTAGTGCAAAAAAATTAGCTGTTGAG------GCT---GGAGGAGCT---GTT---TTA---CAA---GCT---CAC---AAA---GCTCTT---TGCTGGTTTGTATTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKV---A--GAKK-SL------------MWR-MIFLSVIMLVTGYIGE---V------L--SR--------------------------------DNA------WLW-GLLSGAAYFVIVYDI-----W--L-GSAKKLAVE--A-GGA-V-L-Q-A-H-K-AL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ929915 [II-CFB-Dokdonia] PRGD_OTU366_otuREP_666f0f54c753dad4d1736dfa45cedd32 gb|KJ929915| PRGD_OTU366_otuREP_666f0f54c753dad4d1736dfa45cedd32, putative proteorhodopsin gene, partial cds. PRGD_OTU366_otuREP_666f0f54c753dad4d1736dfa45cedd32, putative proteorhodopsin gene, partial cds. KJ929915 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na GTTTTAACAGTACCGTTAATGTGTGTTGAATTTTACTTAATTCTAAAAGTAGCTGGTGCCAAAAAATCTATGATGTGGAGTTTAATCTTCTGGTCTGTTGTTATGCTTGTAACTGGTTATATAGGTGAAGCTATTGACAAACCTAACGCACAGATTTGGGGACTTCTATCTGGAGCTGCATACTTTAAAATTGTTTATGACATTTGGTTAGGATCTGCGAAGAAGTTAGCTGTTGAGGCTGGTGGATCTGTATTAAGTGCTCACAAAACTTTATGTTGGTTTGTATTAGTT VLTVPLMCVEFYLILKVAGAKKSMMWSLIFWSVVMLVTGYIGEAIDKPNAQIWGLLSGAAYFKIVYDIWLGSAKKLAVEAGGSVLSAHKTLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTTAACAGTACCGTTAATGTGTGTTGAATTTTACTTAATTCTAAAAGTA---------GCT------GGTGCCAAAAAA---TCTATG------------------------------------ATGTGGAGT---TTAATCTTCTGGTCTGTTGTTATGCTTGTAACTGGTTATATAGGTGAA---------GCT------------------ATT------GACAAA------------------------------------------------------------------------------------------------CCTAACGCA------------------CAGATTTGG---GGACTTCTATCTGGAGCTGCATACTTTAAAATTGTTTATGACATT---------------TGG------TTA---GGATCTGCGAAGAAGTTAGCTGTTGAG------GCT---GGTGGATCT---GTA---TTA---AGT---GCT---CAC---AAA---ACTTTA---TGTTGGTTTGTATTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKV---A--GAKK-SM------------MWS-LIFWSVVMLVTGYIGE---A------I--DK--------------------------------PNA------QIW-GLLSGAAYFKIVYDI-----W--L-GSAKKLAVE--A-GGS-V-L-S-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ929126 [II-CFB-Dokdonia] PRGD_OTU078a_a59d457430254318d6d82642ac06703c gb|KJ929126| PRGD_OTU078a_a59d457430254318d6d82642ac06703c, putative proteorhodopsin gene, partial cds. PRGD_OTU078a_a59d457430254318d6d82642ac06703c, putative proteorhodopsin gene, partial cds. KJ929126 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) ATTTTAACAGTTCCACTAATGTGTGTAGAATTTTATCTAATCCTAAAAGTGGCAGGTGCTAAGAAATCGATGATGTGGAGATTGATCTTCTTATCAGTGGTGATGTTAGTTACTGGTTATTTGGGTGAAGCTGTATACAGTGACAATGCTCAAATTTGGGGTCTTGTATCTGGAGCAGCTTATTTCGTAATTGCTTATGATATATGGCTAGGTGGAGCAAGAAAATTAGCAGTTGAAGCTGGTGGAGCAGTGTTATCAGCTCACAAAATGTTATGTTGGTTTGTACTCGTT ILTVPLMCVEFYLILKVAGAKKSMMWRLIFLSVVMLVTGYLGEAVYSDNAQIWGLVSGAAYFVIAYDIWLGGARKLAVEAGGAVLSAHKMLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACAGTTCCACTAATGTGTGTAGAATTTTATCTAATCCTAAAAGTG---------GCA------GGTGCTAAGAAA---TCGATG------------------------------------ATGTGGAGA---TTGATCTTCTTATCAGTGGTGATGTTAGTTACTGGTTATTTGGGTGAA---------GCT------------------GTA------TACAGT------------------------------------------------------------------------------------------------GACAATGCT------------------CAAATTTGG---GGTCTTGTATCTGGAGCAGCTTATTTCGTAATTGCTTATGATATA---------------TGG------CTA---GGTGGAGCAAGAAAATTAGCAGTTGAA------GCT---GGTGGAGCA---GTG---TTA---TCA---GCT---CAC---AAA---ATGTTA---TGTTGGTTTGTACTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GAKK-SM------------MWR-LIFLSVVMLVTGYLGE---A------V--YS--------------------------------DNA------QIW-GLVSGAAYFVIAYDI-----W--L-GGARKLAVE--A-GGA-V-L-S-A-H-K-ML-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ929124 [II-CFB-Dokdonia] PRGD_OTU078a_otuREP_328d649988a1f3ac51c452e22d0f7a58 gb|KJ929124| PRGD_OTU078a_otuREP_328d649988a1f3ac51c452e22d0f7a58, putative proteorhodopsin gene, partial cds. PRGD_OTU078a_otuREP_328d649988a1f3ac51c452e22d0f7a58, putative proteorhodopsin gene, partial cds. KJ929124 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264) ATTTTAACAGTACCGTTAATGTGTGTTGAGTTTTATCTTATACTTAAAGTTGCTGGTGCAAAGAAATCTATGATGTGGAGATTAATCTTCTTATCTGTGATAATGCTTGTAACCGGTTATTGGGGAGAGGCTGTAGATAGAGATAACGCCCAAGTTTGGGGTCTTATTTCTGGTATTGCTTACTTTGTAATTGCTTATGATATTTGGTTAGGATCTGCTAAGAAATTAGCTGTAGAAGCTGGAGGAGCAGTTTTAAAAGCTCACAAAACTCTTTGCTGGTTTGTTCTAGTA ILTVPLMCVEFYLILKVAGAKKSMMWRLIFLSVIMLVTGYWGEAVDRDNAQVWGLISGIAYFVIAYDIWLGSAKKLAVEAGGAVLKAHKTLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACAGTACCGTTAATGTGTGTTGAGTTTTATCTTATACTTAAAGTT---------GCT------GGTGCAAAGAAA---TCTATG------------------------------------ATGTGGAGA---TTAATCTTCTTATCTGTGATAATGCTTGTAACCGGTTATTGGGGAGAG---------GCT------------------GTA------GATAGA------------------------------------------------------------------------------------------------GATAACGCC------------------CAAGTTTGG---GGTCTTATTTCTGGTATTGCTTACTTTGTAATTGCTTATGATATT---------------TGG------TTA---GGATCTGCTAAGAAATTAGCTGTAGAA------GCT---GGAGGAGCA---GTT---TTA---AAA---GCT---CAC---AAA---ACTCTT---TGCTGGTTTGTTCTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GAKK-SM------------MWR-LIFLSVIMLVTGYWGE---A------V--DR--------------------------------DNA------QVW-GLISGIAYFVIAYDI-----W--L-GSAKKLAVE--A-GGA-V-L-K-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ929125 [II-CFB-Dokdonia] PRGD_OTU078a_45854630f36f71fd4ae42c60451002e3 gb|KJ929125| PRGD_OTU078a_45854630f36f71fd4ae42c60451002e3, putative proteorhodopsin gene, partial cds. PRGD_OTU078a_45854630f36f71fd4ae42c60451002e3, putative proteorhodopsin gene, partial cds. KJ929125 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) ATTTTAACAGTACCTTTAATGTGTGTTGAATTTTATCTTATACTTAAAGTTGCTGGTGCAAAGAAATCTATGATGTGGAGATTAATCTTCTTATCTGTGGTAATGCTTGTAACCGGTTATTGGGGAGAGGCTGTAGATAGAGATAACGCCCAAGTTTGGGGTCTTATTTCTGGTATTGCTTACTTTGTAATTGCTTATGATATTTGGTTAGGATCTGCTAAGAAATTAGCTGTAGAAGCTGGAGGAGCAGTTTTAAAAGCTCACAAAACTCTTTGCTGGTTTGTTCTTGTA ILTVPLMCVEFYLILKVAGAKKSMMWRLIFLSVVMLVTGYWGEAVDRDNAQVWGLISGIAYFVIAYDIWLGSAKKLAVEAGGAVLKAHKTLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACAGTACCTTTAATGTGTGTTGAATTTTATCTTATACTTAAAGTT---------GCT------GGTGCAAAGAAA---TCTATG------------------------------------ATGTGGAGA---TTAATCTTCTTATCTGTGGTAATGCTTGTAACCGGTTATTGGGGAGAG---------GCT------------------GTA------GATAGA------------------------------------------------------------------------------------------------GATAACGCC------------------CAAGTTTGG---GGTCTTATTTCTGGTATTGCTTACTTTGTAATTGCTTATGATATT---------------TGG------TTA---GGATCTGCTAAGAAATTAGCTGTAGAA------GCT---GGAGGAGCA---GTT---TTA---AAA---GCT---CAC---AAA---ACTCTT---TGCTGGTTTGTTCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GAKK-SM------------MWR-LIFLSVVMLVTGYWGE---A------V--DR--------------------------------DNA------QVW-GLISGIAYFVIAYDI-----W--L-GSAKKLAVE--A-GGA-V-L-K-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ929146 [II-CFB-Dokdonia] PRGD_OTU080a_bfb6de4fd42bff1e543a9c98c803c15f gb|KJ929146| PRGD_OTU080a_bfb6de4fd42bff1e543a9c98c803c15f, putative proteorhodopsin gene, partial cds. PRGD_OTU080a_bfb6de4fd42bff1e543a9c98c803c15f, putative proteorhodopsin gene, partial cds. KJ929146 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833) ATCTTAACTGTTCCATTGATGTGTGTTGAATTTTATCTGATACTCAAGGTAGCAGGCGCAAAAAAATCTTTGATGTGGCGATTGATAGTATTGTCCGTGATCATGCTTGTAACTGGTTACTGGGGAGAAGCAGTAGATCCAGGAAATGCTTGGCTTTGGGGTCTCATATCAGGGGTTGCATATTTTGTTATAGTTTATGACATTTGGGTAGGTTCTGCAAAAAAGCTGGCTGTAGAAGCTGGAGGTGCTGTTTTAAGTGCTCATAAAACACTTTGTTGGTTTGTGCTCGCT ILTVPLMCVEFYLILKVAGAKKSLMWRLIVLSVIMLVTGYWGEAVDPGNAWLWGLISGVAYFVIVYDIWVGSAKKLAVEAGGAVLSAHKTLCWFVLA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAACTGTTCCATTGATGTGTGTTGAATTTTATCTGATACTCAAGGTA---------GCA------GGCGCAAAAAAA---TCTTTG------------------------------------ATGTGGCGA---TTGATAGTATTGTCCGTGATCATGCTTGTAACTGGTTACTGGGGAGAA---------GCA------------------GTA------GATCCA------------------------------------------------------------------------------------------------GGAAATGCT------------------TGGCTTTGG---GGTCTCATATCAGGGGTTGCATATTTTGTTATAGTTTATGACATT---------------TGG------GTA---GGTTCTGCAAAAAAGCTGGCTGTAGAA------GCT---GGAGGTGCT---GTT---TTA---AGT---GCT---CAT---AAA---ACACTT---TGTTGGTTTGTGCTCGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GAKK-SL------------MWR-LIVLSVIMLVTGYWGE---A------V--DP--------------------------------GNA------WLW-GLISGVAYFVIVYDI-----W--V-GSAKKLAVE--A-GGA-V-L-S-A-H-K-TL-CWFVLA-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ929703 [II-CFB-Dokdonia] PRGD_OTU203_21125383dfcd813df55a5a6339f97c9b gb|KJ929703| PRGD_OTU203_21125383dfcd813df55a5a6339f97c9b, putative proteorhodopsin gene, partial cds. PRGD_OTU203_21125383dfcd813df55a5a6339f97c9b, putative proteorhodopsin gene, partial cds. KJ929703 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (73.9992, 19.2097), Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683) GTATTAACTGTACCTTTAATGTGTGTTGAATTCTTCTTAATCTTAAAAGTAGCTGGTGCTAAAAAATCAATGATGTGGAGATTAATCTTCTTATCTGTGATTATGTTAGTAACTGGATATTTTGGAGAGGCAGTATACAGAGACAGCGCTTGGTTATGGGGTCTAGTTTCAGGTATTGCTTATTTCGTAATTGTTTACGATATCTGGTTAGGAGAGGCAAAAAAATTAGCCGAAGCTGCAGGTGGAGCCGTTCTTTCTGCTCACAAAACACTATGCTGGTTCGTATTAGTT VLTVPLMCVEFFLILKVAGAKKSMMWRLIFLSVIMLVTGYFGEAVYRDSAWLWGLVSGIAYFVIVYDIWLGEAKKLAEAAGGAVLSAHKTLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAACTGTACCTTTAATGTGTGTTGAATTCTTCTTAATCTTAAAAGTA---------GCT------GGTGCTAAAAAA---TCAATG------------------------------------ATGTGGAGA---TTAATCTTCTTATCTGTGATTATGTTAGTAACTGGATATTTTGGAGAG---------GCA------------------GTA------TACAGA------------------------------------------------------------------------------------------------GACAGCGCT------------------TGGTTATGG---GGTCTAGTTTCAGGTATTGCTTATTTCGTAATTGTTTACGATATC---------------TGG------TTA---GGAGAGGCAAAAAAATTAGCCGAAGCT------GCA---GGTGGAGCC---GTT---CTT---TCT---GCT---CAC---AAA---ACACTA---TGCTGGTTCGTATTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFFLILKV---A--GAKK-SM------------MWR-LIFLSVIMLVTGYFGE---A------V--YR--------------------------------DSA------WLW-GLVSGIAYFVIVYDI-----W--L-GEAKKLAEA--A-GGA-V-L-S-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ929605 [II-CFB-Dokdonia] PRGD_OTU167_otuREP_17122920f16a2044fba62f076ec812a4 gb|KJ929605| PRGD_OTU167_otuREP_17122920f16a2044fba62f076ec812a4, putative proteorhodopsin gene, partial cds. PRGD_OTU167_otuREP_17122920f16a2044fba62f076ec812a4, putative proteorhodopsin gene, partial cds. KJ929605 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), Indian Ocean (-23.5956, 69.0419) GTATTAACAGTGCCATTAATGGCTGTTGAGTTTTATTTAATCCTTAAAATTGCAGGAGCAAAGAAATCTCTATTGTGGAGATTGATTTTATTATCTGTGATCATGCTAGTAACCGGTTATGTAGGTGAAGTGCTAGATGTAAATAATGCTTGGTTCTGGGGTCTTATTTCAGGAATAGCTTATTTCGTAATTGTTTATGACATTTGGTTCGGTACTGCAAAAAAATTAGCAGTAGCAGCTGGTGGAGAAGTATTAAAAGCACACAAAGCATTATGTTGGTTCGTATTGGTA VLTVPLMAVEFYLILKIAGAKKSLLWRLILLSVIMLVTGYVGEVLDVNNAWFWGLISGIAYFVIVYDIWFGTAKKLAVAAGGEVLKAHKALCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAACAGTGCCATTAATGGCTGTTGAGTTTTATTTAATCCTTAAAATT---------GCA------GGAGCAAAGAAA---TCTCTA------------------------------------TTGTGGAGA---TTGATTTTATTATCTGTGATCATGCTAGTAACCGGTTATGTAGGTGAA---------GTG------------------CTA------GATGTA------------------------------------------------------------------------------------------------AATAATGCT------------------TGGTTCTGG---GGTCTTATTTCAGGAATAGCTTATTTCGTAATTGTTTATGACATT---------------TGG------TTC---GGTACTGCAAAAAAATTAGCAGTAGCA------GCT---GGTGGAGAA---GTA---TTA---AAA---GCA---CAC---AAA---GCATTA---TGTTGGTTCGTATTGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMAVEFYLILKI---A--GAKK-SL------------LWR-LILLSVIMLVTGYVGE---V------L--DV--------------------------------NNA------WFW-GLISGIAYFVIVYDI-----W--F-GTAKKLAVA--A-GGE-V-L-K-A-H-K-AL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ929606 [II-CFB-Dokdonia] PRGD_OTU167_1b45943acb88511c652f3049d6a1acc5 gb|KJ929606| PRGD_OTU167_1b45943acb88511c652f3049d6a1acc5, putative proteorhodopsin gene, partial cds. PRGD_OTU167_1b45943acb88511c652f3049d6a1acc5, putative proteorhodopsin gene, partial cds. KJ929606 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na GTATTAACAGTGCCATTAATGGCTGTTGAGTTTTATTTAATCCTAAAGATTGCAGGGGCAAAGAAATCTTTATTGTGGAGATTGATTTTATTATCTGTAATCATGCTAGTAACTGGTTATATAGGTGAAGTACTAGATGTAAATAACGCTTGGTTCTGGGGTCTTATTTCAGGAATAGCATATTTCGTAATTGTATATGATATTTGGTTAGGTACTGCAAAAAAATTAGCAGTAGCAGCTGGTGGAGAAGTATTAAAAGCACACAAAGCATTATGTTGGTTCGTGTTGGTA VLTVPLMAVEFYLILKIAGAKKSLLWRLILLSVIMLVTGYIGEVLDVNNAWFWGLISGIAYFVIVYDIWLGTAKKLAVAAGGEVLKAHKALCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAACAGTGCCATTAATGGCTGTTGAGTTTTATTTAATCCTAAAGATT---------GCA------GGGGCAAAGAAA---TCTTTA------------------------------------TTGTGGAGA---TTGATTTTATTATCTGTAATCATGCTAGTAACTGGTTATATAGGTGAA---------GTA------------------CTA------GATGTA------------------------------------------------------------------------------------------------AATAACGCT------------------TGGTTCTGG---GGTCTTATTTCAGGAATAGCATATTTCGTAATTGTATATGATATT---------------TGG------TTA---GGTACTGCAAAAAAATTAGCAGTAGCA------GCT---GGTGGAGAA---GTA---TTA---AAA---GCA---CAC---AAA---GCATTA---TGTTGGTTCGTGTTGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMAVEFYLILKI---A--GAKK-SL------------LWR-LILLSVIMLVTGYIGE---V------L--DV--------------------------------NNA------WFW-GLISGIAYFVIVYDI-----W--L-GTAKKLAVA--A-GGE-V-L-K-A-H-K-AL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ929607 [II-CFB-Dokdonia] PRGD_OTU167_adf23f8ae5cde74f8822695fa1f44512 gb|KJ929607| PRGD_OTU167_adf23f8ae5cde74f8822695fa1f44512, putative proteorhodopsin gene, partial cds. PRGD_OTU167_adf23f8ae5cde74f8822695fa1f44512, putative proteorhodopsin gene, partial cds. KJ929607 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na GTATTAACAGTACCATTAATGGCTGTTGAGTTTTATTTAATTCTAAAAATTGCAGGAGCTAAAAAATCTTTATTGTGGAGATTAATTTTATTATCTGTTATCATGCTAGTAACCGGTTATGTAGGTGAAGTGTTAGATAGAGATAATGCTTGGTTCTGGGGTCTTATTTCGGGAGGAGCTTACTTCGTAATTGTTTATGACATTTGGTTGGGTACTGCAAAAAAATTAGCAGTAGCAGCTGGTGGAGAGGTGTTAAAAGCACACAAAACATTATGTTGGTTCGTATTAGTT VLTVPLMAVEFYLILKIAGAKKSLLWRLILLSVIMLVTGYVGEVLDRDNAWFWGLISGGAYFVIVYDIWLGTAKKLAVAAGGEVLKAHKTLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAACAGTACCATTAATGGCTGTTGAGTTTTATTTAATTCTAAAAATT---------GCA------GGAGCTAAAAAA---TCTTTA------------------------------------TTGTGGAGA---TTAATTTTATTATCTGTTATCATGCTAGTAACCGGTTATGTAGGTGAA---------GTG------------------TTA------GATAGA------------------------------------------------------------------------------------------------GATAATGCT------------------TGGTTCTGG---GGTCTTATTTCGGGAGGAGCTTACTTCGTAATTGTTTATGACATT---------------TGG------TTG---GGTACTGCAAAAAAATTAGCAGTAGCA------GCT---GGTGGAGAG---GTG---TTA---AAA---GCA---CAC---AAA---ACATTA---TGTTGGTTCGTATTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMAVEFYLILKI---A--GAKK-SL------------LWR-LILLSVIMLVTGYVGE---V------L--DR--------------------------------DNA------WFW-GLISGGAYFVIVYDI-----W--L-GTAKKLAVA--A-GGE-V-L-K-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ929819 [II-CFB-Dokdonia] PRGD_OTU270_otuREP_9389ef17d9b02cc74166108c1a943759 gb|KJ929819| PRGD_OTU270_otuREP_9389ef17d9b02cc74166108c1a943759, putative proteorhodopsin gene, partial cds. PRGD_OTU270_otuREP_9389ef17d9b02cc74166108c1a943759, putative proteorhodopsin gene, partial cds. KJ929819 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683) GTATTAACAGTACCTTTAATGTGTGTTGAATTCTATCTTATTCTTAAAGTTGCTGGTGCCAAAAAGTCTCTTATGTGGAAACTAATTTTCTTGTCGGTTGTTATGCTTGTAACAGGATACTTTGGAGAAGCTGTTTACACTACAGGTACTGGACCGGCTATCTGGGGATTACTATCTGGGCTTGCATATTTTGCAATTGCTTACATGATATGGTTTGGAGAAGCAAAAAAACTTGCCGAACAAGCTGGTGGTGCAGTATTAAAAGCACACAAAACCTTATGTTGGTTTGTTTTAGTA VLTVPLMCVEFYLILKVAGAKKSLMWKLIFLSVVMLVTGYFGEAVYTTGTGPAIWGLLSGLAYFAIAYMIWFGEAKKLAEQAGGAVLKAHKTLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAACAGTACCTTTAATGTGTGTTGAATTCTATCTTATTCTTAAAGTT---------GCT------GGTGCCAAAAAG---TCTCTT------------------------------------ATGTGGAAA---CTAATTTTCTTGTCGGTTGTTATGCTTGTAACAGGATACTTTGGAGAA---------GCT------------------GTT------TACACT------------------------------------------------------ACA---------GGT---------------------------ACTGGACCG------------------GCTATCTGG---GGATTACTATCTGGGCTTGCATATTTTGCAATTGCTTACATGATA---------------TGG------TTT---GGAGAAGCAAAAAAACTTGCCGAACAA------GCT---GGTGGTGCA---GTA---TTA---AAA---GCA---CAC---AAA---ACCTTA---TGTTGGTTTGTTTTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKV---A--GAKK-SL------------MWK-LIFLSVVMLVTGYFGE---A------V--YT------------------T---G---------TGP------AIW-GLLSGLAYFAIAYMI-----W--F-GEAKKLAEQ--A-GGA-V-L-K-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ929832 [II-CFB-Dokdonia] PRGD_OTU283_otuREP_912f741e7532944849f90fdf95fc1441 gb|KJ929832| PRGD_OTU283_otuREP_912f741e7532944849f90fdf95fc1441, putative proteorhodopsin gene, partial cds. PRGD_OTU283_otuREP_912f741e7532944849f90fdf95fc1441, putative proteorhodopsin gene, partial cds. KJ929832 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATCCTCACAGTACCTCTTATGTGTGTTGAATTCTACCTCATACTTAAAGCTGCAGGAGCAAAGAAATCTTTAATGTGGAAATTAATTTTCCTCTCCGTCGTAATGTTAGTGACAGGCTACCTCGGTGAAGCAGTGTACAGAAATCAAGCTTGGGTTTGGGGATTAATTTCTGGTATTGCTTACTTCGTAATTGTCTACATCATTTGGATGGGGGAAGCAAAAAAATTGGCAGAACAAGCTGGTGGAGCCGTACTTCGCGCCCACAAAACTCTATGCTGGTTTGTCTTAGCT ILTVPLMCVEFYLILKAAGAKKSLMWKLIFLSVVMLVTGYLGEAVYRNQAWVWGLISGIAYFVIVYIIWMGEAKKLAEQAGGAVLRAHKTLCWFVLA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCTCACAGTACCTCTTATGTGTGTTGAATTCTACCTCATACTTAAAGCT---------GCA------GGAGCAAAGAAA---TCTTTA------------------------------------ATGTGGAAA---TTAATTTTCCTCTCCGTCGTAATGTTAGTGACAGGCTACCTCGGTGAA---------GCA------------------GTG------TACAGA------------------------------------------------------------------------------------------------AATCAAGCT------------------TGGGTTTGG---GGATTAATTTCTGGTATTGCTTACTTCGTAATTGTCTACATCATT---------------TGG------ATG---GGGGAAGCAAAAAAATTGGCAGAACAA------GCT---GGTGGAGCC---GTA---CTT---CGC---GCC---CAC---AAA---ACTCTA---TGCTGGTTTGTCTTAGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GAKK-SL------------MWK-LIFLSVVMLVTGYLGE---A------V--YR--------------------------------NQA------WVW-GLISGIAYFVIVYII-----W--M-GEAKKLAEQ--A-GGA-V-L-R-A-H-K-TL-CWFVLA-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ929702 [II-CFB-Dokdonia] PRGD_OTU203_otuREP_191549449c1562173ebde81a8b62eec2 gb|KJ929702| PRGD_OTU203_otuREP_191549449c1562173ebde81a8b62eec2, putative proteorhodopsin gene, partial cds. PRGD_OTU203_otuREP_191549449c1562173ebde81a8b62eec2, putative proteorhodopsin gene, partial cds. KJ929702 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683) GTATTGACAGTGCCATTAATGTGTGTTGAGTTCTACTTAATTCTAAAAGTAGCAGGAGCTAAAAAATCGTTAATGTGGCGATTAATTTTCTTATCTGTAGTAATGTTAGTTACAGGTTACATGGGAGAAGTTCTTTACAGAGACCAAGCATGGTTCTGGGGATTAATTTCAGGTCTAGCATATTTCGTAATTGTGTATGACATCTGGTTCGGTACTGCTAAGAAACTAGCAGAAGCTGCAGGCGGAGCTGTATTAAAAGCACACAAAACATTATGTTGGTTTGTATTAGTT VLTVPLMCVEFYLILKVAGAKKSLMWRLIFLSVVMLVTGYMGEVLYRDQAWFWGLISGLAYFVIVYDIWFGTAKKLAEAAGGAVLKAHKTLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTGACAGTGCCATTAATGTGTGTTGAGTTCTACTTAATTCTAAAAGTA---------GCA------GGAGCTAAAAAA---TCGTTA------------------------------------ATGTGGCGA---TTAATTTTCTTATCTGTAGTAATGTTAGTTACAGGTTACATGGGAGAA---------GTT------------------CTT------TACAGA------------------------------------------------------------------------------------------------GACCAAGCA------------------TGGTTCTGG---GGATTAATTTCAGGTCTAGCATATTTCGTAATTGTGTATGACATC---------------TGG------TTC---GGTACTGCTAAGAAACTAGCAGAAGCT------GCA---GGCGGAGCT---GTA---TTA---AAA---GCA---CAC---AAA---ACATTA---TGTTGGTTTGTATTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKV---A--GAKK-SL------------MWR-LIFLSVVMLVTGYMGE---V------L--YR--------------------------------DQA------WFW-GLISGLAYFVIVYDI-----W--F-GTAKKLAEA--A-GGA-V-L-K-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ929144 [II-CFB-Dokdonia] PRGD_OTU080a_33237c39bf05b3f3bf96891b25035b9d gb|KJ929144| PRGD_OTU080a_33237c39bf05b3f3bf96891b25035b9d, putative proteorhodopsin gene, partial cds. PRGD_OTU080a_33237c39bf05b3f3bf96891b25035b9d, putative proteorhodopsin gene, partial cds. KJ929144 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Bering strait marine 67.49 -168.12 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097) GTATTAACAGTGCCATTAATGTGTGTTGAGTTTTATTTAATTTTAAAAGTTGCAGGCGCTAAAAAATCTTTAATGTGGAGATTAATTTTATTATCTGTGATTATGTTAGTAACAGGTTACATAGGTGAAGCTATTGATCAAGCAAATGCTCAGGTTTGGGGTCTTGCATCAGGTATAGCTTACTTCGTAATTGTATATGACATTTGGTTAGGTACTGCTAAAAAATTAGCTGTTGAAGCTGGTGGGGCGGTATTAAAAGCACACAAAACATTATGTTGGTTCGTATTAGTA VLTVPLMCVEFYLILKVAGAKKSLMWRLILLSVIMLVTGYIGEAIDQANAQVWGLASGIAYFVIVYDIWLGTAKKLAVEAGGAVLKAHKTLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAACAGTGCCATTAATGTGTGTTGAGTTTTATTTAATTTTAAAAGTT---------GCA------GGCGCTAAAAAA---TCTTTA------------------------------------ATGTGGAGA---TTAATTTTATTATCTGTGATTATGTTAGTAACAGGTTACATAGGTGAA---------GCT------------------ATT------GATCAA------------------------------------------------------------------------------------------------GCAAATGCT------------------CAGGTTTGG---GGTCTTGCATCAGGTATAGCTTACTTCGTAATTGTATATGACATT---------------TGG------TTA---GGTACTGCTAAAAAATTAGCTGTTGAA------GCT---GGTGGGGCG---GTA---TTA---AAA---GCA---CAC---AAA---ACATTA---TGTTGGTTCGTATTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKV---A--GAKK-SL------------MWR-LILLSVIMLVTGYIGE---A------I--DQ--------------------------------ANA------QVW-GLASGIAYFVIVYDI-----W--L-GTAKKLAVE--A-GGA-V-L-K-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Dokdonia]_KJ929145 [II-CFB-Dokdonia] PRGD_OTU080a_67fec1499b97f18b7d5a1e4723ffc795 gb|KJ929145| PRGD_OTU080a_67fec1499b97f18b7d5a1e4723ffc795, putative proteorhodopsin gene, partial cds. PRGD_OTU080a_67fec1499b97f18b7d5a1e4723ffc795, putative proteorhodopsin gene, partial cds. KJ929145 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia-like Polaribacter-like mesoflavibacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185; 67.49, -168.12) GTATTAACAGTGCCATTAATGTGTGTTGAGTTTTATTTAATTTTAAAAGTTGCAGGCGCTAAAAAATCTTTAATGTGGAGATTAATTTTATTATCTGTGATTATGTTAGTAACAGGTTACATAGGTGAAGCTATTGATCCAGGAAATGCTTCGGTTTGGGGTCTTGCATCAGGTATAGCTTACTTCGTAATTGTATATGACATTTGGTTAGGTACTGCTAAAAAATTAGCTGTTGAAGCTGGTGGGGCGGTATTAAAAGCACACAAAACATTATGTTGGTTCGTATTAGTA VLTVPLMCVEFYLILKVAGAKKSLMWRLILLSVIMLVTGYIGEAIDPGNASVWGLASGIAYFVIVYDIWLGTAKKLAVEAGGAVLKAHKTLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAACAGTGCCATTAATGTGTGTTGAGTTTTATTTAATTTTAAAAGTT---------GCA------GGCGCTAAAAAA---TCTTTA------------------------------------ATGTGGAGA---TTAATTTTATTATCTGTGATTATGTTAGTAACAGGTTACATAGGTGAA---------GCT------------------ATT------GATCCA------------------------------------------------------------------------------------------------GGAAATGCT------------------TCGGTTTGG---GGTCTTGCATCAGGTATAGCTTACTTCGTAATTGTATATGACATT---------------TGG------TTA---GGTACTGCTAAAAAATTAGCTGTTGAA------GCT---GGTGGGGCG---GTA---TTA---AAA---GCA---CAC---AAA---ACATTA---TGTTGGTTCGTATTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKV---A--GAKK-SL------------MWR-LILLSVIMLVTGYIGE---A------I--DP--------------------------------GNA------SVW-GLASGIAYFVIVYDI-----W--L-GTAKKLAVE--A-GGA-V-L-K-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_KJ929150 [II-CFB-Polaribacter] PRGD_OTU080b_246bf2e0298778a89b5df85c8ce6a43a gb|KJ929150| PRGD_OTU080b_246bf2e0298778a89b5df85c8ce6a43a, putative proteorhodopsin gene, partial cds. PRGD_OTU080b_246bf2e0298778a89b5df85c8ce6a43a, putative proteorhodopsin gene, partial cds. KJ929150 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na GTCCTTACGGTGCCGTTGATGTGTGTTGAATTTTATCTCATCCTGAAAGTAGCCGGAGCGAAAAAATCTCTCATGTGGCGTATGATTTTCTTATCTGTAATCATGCTTGTCACTGGTTATTTCGGCGAAACAATCGATCGTGGCAATGCTCAAGTATGGGGATTGATTTCAGGAATCGCTTATTTCGTTATCGTCTATGATATATGGATGGGTTCTGCCAAGAAGCTGGCCGTAGAAGCTGGAGGGGCGACCCTTTCTGCTCACAAAATGTTGAGCTGGTTTGTGCTCGTT VLTVPLMCVEFYLILKVAGAKKSLMWRMIFLSVIMLVTGYFGETIDRGNAQVWGLISGIAYFVIVYDIWMGSAKKLAVEAGGATLSAHKMLSWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCCTTACGGTGCCGTTGATGTGTGTTGAATTTTATCTCATCCTGAAAGTA---------GCC------GGAGCGAAAAAA---TCTCTC------------------------------------ATGTGGCGT---ATGATTTTCTTATCTGTAATCATGCTTGTCACTGGTTATTTCGGCGAA---------ACA------------------ATC------GATCGT------------------------------------------------------------------------------------------------GGCAATGCT------------------CAAGTATGG---GGATTGATTTCAGGAATCGCTTATTTCGTTATCGTCTATGATATA---------------TGG------ATG---GGTTCTGCCAAGAAGCTGGCCGTAGAA------GCT---GGAGGGGCG---ACC---CTT---TCT---GCT---CAC---AAA---ATGTTG---AGCTGGTTTGTGCTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKV---A--GAKK-SL------------MWR-MIFLSVIMLVTGYFGE---T------I--DR--------------------------------GNA------QVW-GLISGIAYFVIVYDI-----W--M-GSAKKLAVE--A-GGA-T-L-S-A-H-K-ML-SWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_KJ929149 [II-CFB-Polaribacter] PRGD_OTU080b_otuREP_fb1e09ae5ccfb859044985148f34a98b gb|KJ929149| PRGD_OTU080b_otuREP_fb1e09ae5ccfb859044985148f34a98b, putative proteorhodopsin gene, partial cds. PRGD_OTU080b_otuREP_fb1e09ae5ccfb859044985148f34a98b, putative proteorhodopsin gene, partial cds. KJ929149 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185) GTCCTTACGGTACCATTGATGTGTGTTGAATTTTATCTTATCCTTAAAGTAGCAGGAGCGAAAAAGTCACTTATGTGGCGTATGATTTTCCTTTCGGTAGTCATGCTAGTTACAGGATATATTGGTGAAACACTCGATCGTGGCAATGCCCAGGTTTGGGGATTGATTTCAGGTGCGGCTTATTTCGTTATCGTATATGATATATGGATGGGATCTGCTAAGAAATTGGCTGTCGCCGCCGGAGGTGCAACCTTATCTGCTCACAAAATGTTGAGCTGGTTTGTCCTTGTA VLTVPLMCVEFYLILKVAGAKKSLMWRMIFLSVVMLVTGYIGETLDRGNAQVWGLISGAAYFVIVYDIWMGSAKKLAVAAGGATLSAHKMLSWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCCTTACGGTACCATTGATGTGTGTTGAATTTTATCTTATCCTTAAAGTA---------GCA------GGAGCGAAAAAG---TCACTT------------------------------------ATGTGGCGT---ATGATTTTCCTTTCGGTAGTCATGCTAGTTACAGGATATATTGGTGAA---------ACA------------------CTC------GATCGT------------------------------------------------------------------------------------------------GGCAATGCC------------------CAGGTTTGG---GGATTGATTTCAGGTGCGGCTTATTTCGTTATCGTATATGATATA---------------TGG------ATG---GGATCTGCTAAGAAATTGGCTGTCGCC------GCC---GGAGGTGCA---ACC---TTA---TCT---GCT---CAC---AAA---ATGTTG---AGCTGGTTTGTCCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKV---A--GAKK-SL------------MWR-MIFLSVVMLVTGYIGE---T------L--DR--------------------------------GNA------QVW-GLISGAAYFVIVYDI-----W--M-GSAKKLAVA--A-GGA-T-L-S-A-H-K-ML-SWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Polaribacter]_KJ929151 [II-CFB-Polaribacter] PRGD_OTU080b_dbcfb1ba6cedc2a1805b6dc7afb04568 gb|KJ929151| PRGD_OTU080b_dbcfb1ba6cedc2a1805b6dc7afb04568, putative proteorhodopsin gene, partial cds. PRGD_OTU080b_dbcfb1ba6cedc2a1805b6dc7afb04568, putative proteorhodopsin gene, partial cds. KJ929151 [[proteorhodopsin super-cluster II/CFB-like cluster/Polaribacter irgensii-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Polaribacter irgensii-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) GTCTTAACCGTTCCTTTAATGTGTGTTGAATTTTATTTAATCCTAAAGGTTGCAGGAGCTAAAAAGTCACTCATGTGGAGACTCATCGTCTTATCTGTAATCATGTTAGTTACTGGATATTTTGGAGAGGCAGTAGATAGTGATAACGCTCAAATTTGGGGTCTTCTTTCTGGTCTTGCTTACTTTGTGATTGTATATGATATTTGGTTAGGGAGTGCTAAGAAACTAGCTACAGAAGCTGGAGGAGCAGTTTTGAGTGCACACAAAACATTATGTTGGTTTGTTCTTGTA VLTVPLMCVEFYLILKVAGAKKSLMWRLIVLSVIMLVTGYFGEAVDSDNAQIWGLLSGLAYFVIVYDIWLGSAKKLATEAGGAVLSAHKTLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCTTAACCGTTCCTTTAATGTGTGTTGAATTTTATTTAATCCTAAAGGTT---------GCA------GGAGCTAAAAAG---TCACTC------------------------------------ATGTGGAGA---CTCATCGTCTTATCTGTAATCATGTTAGTTACTGGATATTTTGGAGAG---------GCA------------------GTA------GATAGT------------------------------------------------------------------------------------------------GATAACGCT------------------CAAATTTGG---GGTCTTCTTTCTGGTCTTGCTTACTTTGTGATTGTATATGATATT---------------TGG------TTA---GGGAGTGCTAAGAAACTAGCTACAGAA------GCT---GGAGGAGCA---GTT---TTG---AGT---GCA---CAC---AAA---ACATTA---TGTTGGTTTGTTCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKV---A--GAKK-SL------------MWR-LIVLSVIMLVTGYFGE---A------V--DS--------------------------------DNA------QIW-GLLSGLAYFVIVYDI-----W--L-GSAKKLATE--A-GGA-V-L-S-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_KJ929223 [II-CFB-b] PRGD_OTU089_d883ad2810067080babd36fd363dfd1b gb|KJ929223| PRGD_OTU089_d883ad2810067080babd36fd363dfd1b, putative proteorhodopsin gene, partial cds. PRGD_OTU089_d883ad2810067080babd36fd363dfd1b, putative proteorhodopsin gene, partial cds. KJ929223 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833) ATCTTAACAGTTCCATTAATGTGTGTTGAGTTTTACTTAATACTTAAAGTTGCTGGAGCGACTAAAACAGATATGTGGAAGCTTATTGGAGCTTCAACTGTAATGCTTGTCACTGGATTCTTTGGAGAGTCTGGATGGGACGGTGGAGTAATGAACGCAGCAATGTGGGGATTACTTTCAGGTCTAGCTTACTTCTGGATTGCATACGAAGTATGGTTCGGTGGTCTTAAGAAATTAGCAGTTGCTGCTGGTGGAAACGTATTAGAAGCTCACAAAATGTTATGTTGGTTCCTTCTTGTT ILTVPLMCVEFYLILKVAGATKTDMWKLIGASTVMLVTGFFGESGWDGGVMNAAMWGLLSGLAYFWIAYEVWFGGLKKLAVAAGGNVLEAHKMLCWFLLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAACAGTTCCATTAATGTGTGTTGAGTTTTACTTAATACTTAAAGTT---------GCT------GGAGCGACTAAA---ACAGAT------------------------------------ATGTGGAAG---CTTATTGGAGCTTCAACTGTAATGCTTGTCACTGGATTCTTTGGAGAG---------TCT------------------GGA------TGGGAC---------------------------------------GGT------------GGA---------GTA---------------------------ATGAACGCA------------------GCAATGTGG---GGATTACTTTCAGGTCTAGCTTACTTCTGGATTGCATACGAAGTA---------------TGG------TTC---GGTGGTCTTAAGAAATTAGCAGTTGCT------GCT---GGTGGAAAC---GTA---TTA---GAA---GCT---CAC---AAA---ATGTTA---TGTTGGTTCCTTCTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-TD------------MWK-LIGASTVMLVTGFFGE---S------G--WD-------------G----G---V---------MNA------AMW-GLLSGLAYFWIAYEV-----W--F-GGLKKLAVA--A-GGN-V-L-E-A-H-K-ML-CWFLLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_KJ929218 [II-CFB-b] PRGD_OTU089_2ffc5b29e947632b4b8e75704fefd151 gb|KJ929218| PRGD_OTU089_2ffc5b29e947632b4b8e75704fefd151, putative proteorhodopsin gene, partial cds. PRGD_OTU089_2ffc5b29e947632b4b8e75704fefd151, putative proteorhodopsin gene, partial cds. KJ929218 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-33.28, 45.35) ATCTTAACTGTTCCATTAATGTGTGTTGAGTTTTACTTAATACTTAAAGTTGCTGGAGCGACTAAATCAGATATGTGGAAGCTTATTGGAGCTTCAACTGTTATGCTTGTCACTGGATTCTTTGGAGAGTCTGGATGGGACGGTGGAATAATGAACGCAGCAATGTGGGGATTACTTTCAGGTCTTGCTTACTTCTGGATTGCATACGAAGTATGGTTCGGTGGTCTAAAGAAACTAGCAGTTGCTGCTGGTGGAAACGTATTAGAGGCTCACAAAATGTTATGTTGGTTCCTTCTAGTT ILTVPLMCVEFYLILKVAGATKSDMWKLIGASTVMLVTGFFGESGWDGGIMNAAMWGLLSGLAYFWIAYEVWFGGLKKLAVAAGGNVLEAHKMLCWFLLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAACTGTTCCATTAATGTGTGTTGAGTTTTACTTAATACTTAAAGTT---------GCT------GGAGCGACTAAA---TCAGAT------------------------------------ATGTGGAAG---CTTATTGGAGCTTCAACTGTTATGCTTGTCACTGGATTCTTTGGAGAG---------TCT------------------GGA------TGGGAC---------------------------------------GGT------------GGA---------ATA---------------------------ATGAACGCA------------------GCAATGTGG---GGATTACTTTCAGGTCTTGCTTACTTCTGGATTGCATACGAAGTA---------------TGG------TTC---GGTGGTCTAAAGAAACTAGCAGTTGCT------GCT---GGTGGAAAC---GTA---TTA---GAG---GCT---CAC---AAA---ATGTTA---TGTTGGTTCCTTCTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-SD------------MWK-LIGASTVMLVTGFFGE---S------G--WD-------------G----G---I---------MNA------AMW-GLLSGLAYFWIAYEV-----W--F-GGLKKLAVA--A-GGN-V-L-E-A-H-K-ML-CWFLLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_KJ929216 [II-CFB-b] PRGD_OTU089_otuREP_aa5d90e63a08d1004725c22da2dc7d6a gb|KJ929216| PRGD_OTU089_otuREP_aa5d90e63a08d1004725c22da2dc7d6a, putative proteorhodopsin gene, partial cds. PRGD_OTU089_otuREP_aa5d90e63a08d1004725c22da2dc7d6a, putative proteorhodopsin gene, partial cds. KJ929216 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-14.48, 113.45) ATCTTAACTGTTCCATTAATGTGTGTTGAGTTTTACTTAATACTTAAAGTTGCTGGAGCGACTAAATCAGATATGTGGAAGCTTATTGGAGCTTCAACTGTAATGCTTGTTACTGGATTCTTTGGTGAGTCTGGATGGGACGGTGGAATAATGAACGCAGCAATGTGGGGATTACTTTCAGGTCTTGCTTACTTCTGGATTGCATACGAAGTATGGTTCGGTGGTCTTAAGAAACTAGCAGTTGCTGCTGGTGGAAACGTATTAGAGGCTCACAAAATGTTATGTTGGTTCCTTCTAGTT ILTVPLMCVEFYLILKVAGATKSDMWKLIGASTVMLVTGFFGESGWDGGIMNAAMWGLLSGLAYFWIAYEVWFGGLKKLAVAAGGNVLEAHKMLCWFLLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAACTGTTCCATTAATGTGTGTTGAGTTTTACTTAATACTTAAAGTT---------GCT------GGAGCGACTAAA---TCAGAT------------------------------------ATGTGGAAG---CTTATTGGAGCTTCAACTGTAATGCTTGTTACTGGATTCTTTGGTGAG---------TCT------------------GGA------TGGGAC---------------------------------------GGT------------GGA---------ATA---------------------------ATGAACGCA------------------GCAATGTGG---GGATTACTTTCAGGTCTTGCTTACTTCTGGATTGCATACGAAGTA---------------TGG------TTC---GGTGGTCTTAAGAAACTAGCAGTTGCT------GCT---GGTGGAAAC---GTA---TTA---GAG---GCT---CAC---AAA---ATGTTA---TGTTGGTTCCTTCTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-SD------------MWK-LIGASTVMLVTGFFGE---S------G--WD-------------G----G---I---------MNA------AMW-GLLSGLAYFWIAYEV-----W--F-GGLKKLAVA--A-GGN-V-L-E-A-H-K-ML-CWFLLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_KJ929220 [II-CFB-b] PRGD_OTU089_4864edbf93c25f5900728ce46d6e5ba3 gb|KJ929220| PRGD_OTU089_4864edbf93c25f5900728ce46d6e5ba3, putative proteorhodopsin gene, partial cds. PRGD_OTU089_4864edbf93c25f5900728ce46d6e5ba3, putative proteorhodopsin gene, partial cds. KJ929220 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) ATCTTAACTGTTCCATTAATGTGTGTTGAGTTTTACTTAATACTTAAAGTTGCTGGAGCGACTAAATCAGACATGTGGAAGCTTATTGGAGCTTCAACAGTAATGCTTGTTACTGGATTCTTTGGAGAGTCTGGATGGGACGGTGGAATATTGAGCGCAGCAATGTGGGGATTACTTTCAGGTCTTGCTTACTTCTGGATTGCATACGAAGTATGGTTCGGTGGTCTTAAGAAACTAGCAGTTGCTGCTGGTGGAAACGTATTAGAAGCTCACAAAATGTTATGTTGGTTCCTTCTTGTT ILTVPLMCVEFYLILKVAGATKSDMWKLIGASTVMLVTGFFGESGWDGGILSAAMWGLLSGLAYFWIAYEVWFGGLKKLAVAAGGNVLEAHKMLCWFLLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAACTGTTCCATTAATGTGTGTTGAGTTTTACTTAATACTTAAAGTT---------GCT------GGAGCGACTAAA---TCAGAC------------------------------------ATGTGGAAG---CTTATTGGAGCTTCAACAGTAATGCTTGTTACTGGATTCTTTGGAGAG---------TCT------------------GGA------TGGGAC---------------------------------------GGT------------GGA---------ATA---------------------------TTGAGCGCA------------------GCAATGTGG---GGATTACTTTCAGGTCTTGCTTACTTCTGGATTGCATACGAAGTA---------------TGG------TTC---GGTGGTCTTAAGAAACTAGCAGTTGCT------GCT---GGTGGAAAC---GTA---TTA---GAA---GCT---CAC---AAA---ATGTTA---TGTTGGTTCCTTCTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-SD------------MWK-LIGASTVMLVTGFFGE---S------G--WD-------------G----G---I---------LSA------AMW-GLLSGLAYFWIAYEV-----W--F-GGLKKLAVA--A-GGN-V-L-E-A-H-K-ML-CWFLLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_KJ929221 [II-CFB-b] PRGD_OTU089_51ef1b3e4412cab38546ac006fab8b0b gb|KJ929221| PRGD_OTU089_51ef1b3e4412cab38546ac006fab8b0b, putative proteorhodopsin gene, partial cds. PRGD_OTU089_51ef1b3e4412cab38546ac006fab8b0b, putative proteorhodopsin gene, partial cds. KJ929221 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATCTTAACTGTTCCATTAATGTGTGTTGAGTTTTACTTAATACTTAAAGTTGCTGGAGCGACTAAATCTGATATGTGGAAGCTTATTGGAGCTTCAACTGTGATGCTTGTCACTGGATTCTTTGGAGAGTCTGGATGGGACGGTGGAATGTTAAGTGCTGGTGCTTGGGGATTCATCTCAGGTTTAGCATATTTCTGGATCGCATACGAAGTATGGTTAGGTGGTCTTAAAAAACTAGCAGTTGCTGCTGGTGGAAACGTATTAGAAGCTCACAAAATGTTATGTTGGTTCCTTCTTGTT ILTVPLMCVEFYLILKVAGATKSDMWKLIGASTVMLVTGFFGESGWDGGMLSAGAWGFISGLAYFWIAYEVWLGGLKKLAVAAGGNVLEAHKMLCWFLLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAACTGTTCCATTAATGTGTGTTGAGTTTTACTTAATACTTAAAGTT---------GCT------GGAGCGACTAAA---TCTGAT------------------------------------ATGTGGAAG---CTTATTGGAGCTTCAACTGTGATGCTTGTCACTGGATTCTTTGGAGAG---------TCT------------------GGA------TGGGAC---------------------------------------GGT------------GGA---------ATG---------------------------TTAAGTGCT------------------GGTGCTTGG---GGATTCATCTCAGGTTTAGCATATTTCTGGATCGCATACGAAGTA---------------TGG------TTA---GGTGGTCTTAAAAAACTAGCAGTTGCT------GCT---GGTGGAAAC---GTA---TTA---GAA---GCT---CAC---AAA---ATGTTA---TGTTGGTTCCTTCTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-SD------------MWK-LIGASTVMLVTGFFGE---S------G--WD-------------G----G---M---------LSA------GAW-GFISGLAYFWIAYEV-----W--L-GGLKKLAVA--A-GGN-V-L-E-A-H-K-ML-CWFLLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_KJ929219 [II-CFB-b] PRGD_OTU089_3a376e24868edf06fa31930447efb4e2 gb|KJ929219| PRGD_OTU089_3a376e24868edf06fa31930447efb4e2, putative proteorhodopsin gene, partial cds. PRGD_OTU089_3a376e24868edf06fa31930447efb4e2, putative proteorhodopsin gene, partial cds. KJ929219 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) ATCTTAACTGTTCCATTAATGTGTGTTGAGTTTTACTTAATACTTAAAGTTGCTGGAGCAACTAAATCAGATATGTGGAAGCTTATTGGAGCTTCAACTGTGATGCTTGTCACTGGATTCTTTGGAGAGTCTGGATGGGACGGTGGAATGTTAAGTGCTGGTGCTTGGGGATTCATCTCAGGTTTAGCATATTTCTGGATCGCATACGAAGTATGGTTAGGTGGTCTTAAAAAACTAGCAGTTGCTGCTGGTGGAAATGTATTAGAAGCTCACAAAATGTTATGTTGGTTCCTTCTTGTT ILTVPLMCVEFYLILKVAGATKSDMWKLIGASTVMLVTGFFGESGWDGGMLSAGAWGFISGLAYFWIAYEVWLGGLKKLAVAAGGNVLEAHKMLCWFLLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAACTGTTCCATTAATGTGTGTTGAGTTTTACTTAATACTTAAAGTT---------GCT------GGAGCAACTAAA---TCAGAT------------------------------------ATGTGGAAG---CTTATTGGAGCTTCAACTGTGATGCTTGTCACTGGATTCTTTGGAGAG---------TCT------------------GGA------TGGGAC---------------------------------------GGT------------GGA---------ATG---------------------------TTAAGTGCT------------------GGTGCTTGG---GGATTCATCTCAGGTTTAGCATATTTCTGGATCGCATACGAAGTA---------------TGG------TTA---GGTGGTCTTAAAAAACTAGCAGTTGCT------GCT---GGTGGAAAT---GTA---TTA---GAA---GCT---CAC---AAA---ATGTTA---TGTTGGTTCCTTCTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-SD------------MWK-LIGASTVMLVTGFFGE---S------G--WD-------------G----G---M---------LSA------GAW-GFISGLAYFWIAYEV-----W--L-GGLKKLAVA--A-GGN-V-L-E-A-H-K-ML-CWFLLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_KJ929217 [II-CFB-b] PRGD_OTU089_10e53d931fccc269ead178501cf8d5c3 gb|KJ929217| PRGD_OTU089_10e53d931fccc269ead178501cf8d5c3, putative proteorhodopsin gene, partial cds. PRGD_OTU089_10e53d931fccc269ead178501cf8d5c3, putative proteorhodopsin gene, partial cds. KJ929217 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) ATCTTAACTGTTCCATTAATGTGTGTTGAGTTTTACTTAATACTTAAAGTTGCTGGAGCGACTAAAAAAGATATGTGGATGCTTATTGGAGCTTCAACTGTGATGCTTGTCACTGGATTCTTTGGAGAGTCTGGATGGGACGGTGGAATGTTAAGTGCTGGTACTTGGGGATTCATCTCAGGTTTAGCATATTTCTGGATCGCATACGAAGTATGGTTAGGTGGTCTTAAAAAACTAGCAGTTGCTGCTGGTGGAAACGTATTAGAGGCTCACAAAATGTTATGTTGGTTCCTTCTTGTT ILTVPLMCVEFYLILKVAGATKKDMWMLIGASTVMLVTGFFGESGWDGGMLSAGTWGFISGLAYFWIAYEVWLGGLKKLAVAAGGNVLEAHKMLCWFLLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAACTGTTCCATTAATGTGTGTTGAGTTTTACTTAATACTTAAAGTT---------GCT------GGAGCGACTAAA---AAAGAT------------------------------------ATGTGGATG---CTTATTGGAGCTTCAACTGTGATGCTTGTCACTGGATTCTTTGGAGAG---------TCT------------------GGA------TGGGAC---------------------------------------GGT------------GGA---------ATG---------------------------TTAAGTGCT------------------GGTACTTGG---GGATTCATCTCAGGTTTAGCATATTTCTGGATCGCATACGAAGTA---------------TGG------TTA---GGTGGTCTTAAAAAACTAGCAGTTGCT------GCT---GGTGGAAAC---GTA---TTA---GAG---GCT---CAC---AAA---ATGTTA---TGTTGGTTCCTTCTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-KD------------MWM-LIGASTVMLVTGFFGE---S------G--WD-------------G----G---M---------LSA------GTW-GFISGLAYFWIAYEV-----W--L-GGLKKLAVA--A-GGN-V-L-E-A-H-K-ML-CWFLLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_KJ929916 [II-CFB-b] PRGD_OTU367_otuREP_461d84d2017b85ab99c788358fe77802 gb|KJ929916| PRGD_OTU367_otuREP_461d84d2017b85ab99c788358fe77802, putative proteorhodopsin gene, partial cds. PRGD_OTU367_otuREP_461d84d2017b85ab99c788358fe77802, putative proteorhodopsin gene, partial cds. KJ929916 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 01-juil-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATCTTAACAGTTCCTTTAATGTGTGTTGAGTTTTACTTAATACTTAAAGTTGCTGGAGCTACTAAAAAAGATATGTGGAGACTAATCACTCTATCAACTGTAATGCTTGTTGCTGGATTCTTTGGTGAGTCTGGATGGGATGGCCAAATGTTTGGAGCTCAAAACGCTGCAGTATGGGGATTAATTTCAGGTGCAGCATACTTTTGGATCCTATACGATATTAGATGGGGTGGCCTTAAGAAAGTAGCAGAAGCAGCTGGTGGAAATGTATTATCAGCTCATAACATGTTAGTATGGTTTGTACTAGTT ILTVPLMCVEFYLILKVAGATKKDMWRLITLSTVMLVAGFFGESGWDGQMFGAQNAAVWGLISGAAYFWILYDIRWGGLKKVAEAAGGNVLSAHNMLVWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAACAGTTCCTTTAATGTGTGTTGAGTTTTACTTAATACTTAAAGTT---------GCT------GGAGCTACTAAA---AAAGAT------------------------------------ATGTGGAGA---CTAATCACTCTATCAACTGTAATGCTTGTTGCTGGATTCTTTGGTGAG---------TCT------------------GGA------TGGGAT---------------------------------------GGCCAAATG---TTTGGA---------GCT---------------------------CAAAACGCT------------------GCAGTATGG---GGATTAATTTCAGGTGCAGCATACTTTTGGATCCTATACGATATT---------------AGA------TGG---GGTGGCCTTAAGAAAGTAGCAGAAGCA------GCT---GGTGGAAAT---GTA---TTA---TCA---GCT---CAT---AAC---ATGTTA---GTATGGTTTGTACTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-KD------------MWR-LITLSTVMLVAGFFGE---S------G--WD-------------GQM-FG---A---------QNA------AVW-GLISGAAYFWILYDI-----R--W-GGLKKVAEA--A-GGN-V-L-S-A-H-N-ML-VWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_KJ929222 [II-CFB-b] PRGD_OTU089_5bf42744c9ea476f843214002938262e gb|KJ929222| PRGD_OTU089_5bf42744c9ea476f843214002938262e, putative proteorhodopsin gene, partial cds. PRGD_OTU089_5bf42744c9ea476f843214002938262e, putative proteorhodopsin gene, partial cds. KJ929222 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) ATTTTAACAGTACCTCTAATGTGTGTTGAATTTTACTTAATACTTAGAGTTGCTGGAGCAACCAAATCACACATGTGGAAATTAATTGGATTCTCAACCATAATGTTAGTCACAGGATTTTTTGGTGAATCTGGCTGGGATGGCGGAATGTTAAACGCTTCCATGTGGGGATTATTATCTGGTCTAGCTTACTTCTATATAGCTTACGAAGTTTGGTTAGGAAGTCTGAAAAAATTAGCTGTTGAAGCTGGAGGTAACGTGCTAAAAGCTCACAATACCTTATGTTGGTTCCTTCTAGTT ILTVPLMCVEFYLILRVAGATKSHMWKLIGFSTIMLVTGFFGESGWDGGMLNASMWGLLSGLAYFYIAYEVWLGSLKKLAVEAGGNVLKAHNTLCWFLLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACAGTACCTCTAATGTGTGTTGAATTTTACTTAATACTTAGAGTT---------GCT------GGAGCAACCAAA---TCACAC------------------------------------ATGTGGAAA---TTAATTGGATTCTCAACCATAATGTTAGTCACAGGATTTTTTGGTGAA---------TCT------------------GGC------TGGGAT---------------------------------------GGC------------GGA---------ATG---------------------------TTAAACGCT------------------TCCATGTGG---GGATTATTATCTGGTCTAGCTTACTTCTATATAGCTTACGAAGTT---------------TGG------TTA---GGAAGTCTGAAAAAATTAGCTGTTGAA------GCT---GGAGGTAAC---GTG---CTA---AAA---GCT---CAC---AAT---ACCTTA---TGTTGGTTCCTTCTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILRV---A--GATK-SH------------MWK-LIGFSTIMLVTGFFGE---S------G--WD-------------G----G---M---------LNA------SMW-GLLSGLAYFYIAYEV-----W--L-GSLKKLAVE--A-GGN-V-L-K-A-H-N-TL-CWFLLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_KJ928621 [II-CFB-b] PRGD_OTU044_41cfa413ecdccba30ed7799e3c59e2ce gb|KJ928621| PRGD_OTU044_41cfa413ecdccba30ed7799e3c59e2ce, putative proteorhodopsin gene, partial cds. PRGD_OTU044_41cfa413ecdccba30ed7799e3c59e2ce, putative proteorhodopsin gene, partial cds. KJ928621 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Arctic Ocean-Atlantic side (71.501, 19.8025), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) ATTTTAACGGTACCATTGATGTGTGTTGAATTTTACCTTATACTAAAAGTTGCTGGCGCAACAAAGAAACTGATGTGGCAGCTTATATTTCTATCAACTGTAATGTTGGTTTTCGGTTATCTTGGTGAAACAATCGCAGACAGTGCTGTATTCTATGGAACTATTTCGGGAATTGCATATTTTGTAATTGTTTACATGATATGGTTAGGTCCTGCAAAAAAACTTGCAACTGATGCAGGCGGAGATGTTCTACAGGCACATAAATACTTATGCTGGTTCGTTCTTGTT ILTVPLMCVEFYLILKVAGATKKLMWQLIFLSTVMLVFGYLGETIADSAVFYGTISGIAYFVIVYMIWLGPAKKLATDAGGDVLQAHKYLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACGGTACCATTGATGTGTGTTGAATTTTACCTTATACTAAAAGTT---------GCT------GGCGCAACAAAG---AAACTG------------------------------------ATGTGGCAG---CTTATATTTCTATCAACTGTAATGTTGGTTTTCGGTTATCTTGGTGAA---------ACA------------------ATC------GCA---------------------------------------------------------------------------------------------------GACAGTGCT------------------GTATTCTAT---GGAACTATTTCGGGAATTGCATATTTTGTAATTGTTTACATGATA---------------TGG------TTA---GGTCCTGCAAAAAAACTTGCAACTGAT------GCA---GGCGGAGAT---GTT---CTA---CAG---GCA---CAT---AAA---TACTTA---TGCTGGTTCGTTCTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-KL------------MWQ-LIFLSTVMLVFGYLGE---T------I--A---------------------------------DSA------VFY-GTISGIAYFVIVYMI-----W--L-GPAKKLATD--A-GGD-V-L-Q-A-H-K-YL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_KJ928624 [II-CFB-b] PRGD_OTU044_6f61448e0f6bcbe92e590c50f9ffeb3d gb|KJ928624| PRGD_OTU044_6f61448e0f6bcbe92e590c50f9ffeb3d, putative proteorhodopsin gene, partial cds. PRGD_OTU044_6f61448e0f6bcbe92e590c50f9ffeb3d, putative proteorhodopsin gene, partial cds. KJ928624 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175) ATTTTAACGGTACCATTGATGTGTGTTGAATTTTACCTCATACTAAAAGTTGCTGGCGCAACAAAGAAACTGATGTGGCAGCTTATATTTCTATCAACTGTAATGTTGGTTTTCGGTTATCTTGGTGAAACAATCGCAGACAGTGCTGTATTCTATGGAACTATTTCGGGAATTGCATATTTTGTAATTGTTTACATGATATGGTTAGGTCCTGCCAAAAAACTTGCAACTGATGCAGGCGGTGATGTTCTTCAGGCACATAAATACTTATGCTGGTTCGTTCTTGTT ILTVPLMCVEFYLILKVAGATKKLMWQLIFLSTVMLVFGYLGETIADSAVFYGTISGIAYFVIVYMIWLGPAKKLATDAGGDVLQAHKYLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACGGTACCATTGATGTGTGTTGAATTTTACCTCATACTAAAAGTT---------GCT------GGCGCAACAAAG---AAACTG------------------------------------ATGTGGCAG---CTTATATTTCTATCAACTGTAATGTTGGTTTTCGGTTATCTTGGTGAA---------ACA------------------ATC------GCA---------------------------------------------------------------------------------------------------GACAGTGCT------------------GTATTCTAT---GGAACTATTTCGGGAATTGCATATTTTGTAATTGTTTACATGATA---------------TGG------TTA---GGTCCTGCCAAAAAACTTGCAACTGAT------GCA---GGCGGTGAT---GTT---CTT---CAG---GCA---CAT---AAA---TACTTA---TGCTGGTTCGTTCTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-KL------------MWQ-LIFLSTVMLVFGYLGE---T------I--A---------------------------------DSA------VFY-GTISGIAYFVIVYMI-----W--L-GPAKKLATD--A-GGD-V-L-Q-A-H-K-YL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_KJ928631 [II-CFB-b] PRGD_OTU044_e05eebe3038cc9351046709aab39077b gb|KJ928631| PRGD_OTU044_e05eebe3038cc9351046709aab39077b, putative proteorhodopsin gene, partial cds. PRGD_OTU044_e05eebe3038cc9351046709aab39077b, putative proteorhodopsin gene, partial cds. KJ928631 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683) ATTTTAACGGTACCATTGATGTGTGTTGAATTTTACCTTATACTAAAAGTTGCTGGCGCAACAAAGAAACTGATGTGGCAGCTTATATTTCTATCAACTGTAATGTTGGTTTTCGGTTATCTTGGTGAATCAATCGCAGACAGTGCTGTATTCTATGGAACTATTTCGGGAATTGCATATTTTGTGATTGTTTACATGATATGGTTAGGTCCTGCAAAAAAACTTGCAACTGATGCAGGCGGAGATGTTCTTCAGGCACATAAATACTTATGCTGGTTCGTTCTTGTT ILTVPLMCVEFYLILKVAGATKKLMWQLIFLSTVMLVFGYLGESIADSAVFYGTISGIAYFVIVYMIWLGPAKKLATDAGGDVLQAHKYLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACGGTACCATTGATGTGTGTTGAATTTTACCTTATACTAAAAGTT---------GCT------GGCGCAACAAAG---AAACTG------------------------------------ATGTGGCAG---CTTATATTTCTATCAACTGTAATGTTGGTTTTCGGTTATCTTGGTGAA---------TCA------------------ATC------GCA---------------------------------------------------------------------------------------------------GACAGTGCT------------------GTATTCTAT---GGAACTATTTCGGGAATTGCATATTTTGTGATTGTTTACATGATA---------------TGG------TTA---GGTCCTGCAAAAAAACTTGCAACTGAT------GCA---GGCGGAGAT---GTT---CTT---CAG---GCA---CAT---AAA---TACTTA---TGCTGGTTCGTTCTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-KL------------MWQ-LIFLSTVMLVFGYLGE---S------I--A---------------------------------DSA------VFY-GTISGIAYFVIVYMI-----W--L-GPAKKLATD--A-GGD-V-L-Q-A-H-K-YL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_KJ928633 [II-CFB-b] PRGD_OTU044_ef6f34dcf47df05ae682875059a910ba gb|KJ928633| PRGD_OTU044_ef6f34dcf47df05ae682875059a910ba, putative proteorhodopsin gene, partial cds. PRGD_OTU044_ef6f34dcf47df05ae682875059a910ba, putative proteorhodopsin gene, partial cds. KJ928633 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637; -33.9602, -73.3769), Arctic Ocean-Atlantic side (73.9992, 19.2097), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-23.5956, 69.0419) ATTTTAACGGTACCATTGATGTGTGTTGAATTTTACCTCATACTAAAAGTTGCTGGCGCAACAAAGAAACTGATGTGGCAGCTTATAGGTCTATCAACTGTAATGTTGGTTTTCGGTTATCTTGGTGAAACAATCGCAGACAGTGCTGTATTCTATGGAACTATTTCGGGAATTGCATATTTTGTAATTGTTTACATGATATGGTTAGGTCCTGCAAAAAAACTTGCAACTGATGCAGGCGGAGATGTTCTTCAGGCACATAAATACTTATGCTGGTTCGTTCTTGTT ILTVPLMCVEFYLILKVAGATKKLMWQLIGLSTVMLVFGYLGETIADSAVFYGTISGIAYFVIVYMIWLGPAKKLATDAGGDVLQAHKYLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACGGTACCATTGATGTGTGTTGAATTTTACCTCATACTAAAAGTT---------GCT------GGCGCAACAAAG---AAACTG------------------------------------ATGTGGCAG---CTTATAGGTCTATCAACTGTAATGTTGGTTTTCGGTTATCTTGGTGAA---------ACA------------------ATC------GCA---------------------------------------------------------------------------------------------------GACAGTGCT------------------GTATTCTAT---GGAACTATTTCGGGAATTGCATATTTTGTAATTGTTTACATGATA---------------TGG------TTA---GGTCCTGCAAAAAAACTTGCAACTGAT------GCA---GGCGGAGAT---GTT---CTT---CAG---GCA---CAT---AAA---TACTTA---TGCTGGTTCGTTCTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-KL------------MWQ-LIGLSTVMLVFGYLGE---T------I--A---------------------------------DSA------VFY-GTISGIAYFVIVYMI-----W--L-GPAKKLATD--A-GGD-V-L-Q-A-H-K-YL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_KJ928626 [II-CFB-b] PRGD_OTU044_7726d3f8af40fb5b2f860857451967ac gb|KJ928626| PRGD_OTU044_7726d3f8af40fb5b2f860857451967ac, putative proteorhodopsin gene, partial cds. PRGD_OTU044_7726d3f8af40fb5b2f860857451967ac, putative proteorhodopsin gene, partial cds. KJ928626 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-14.48, 113.45) ATTTTAACGGTACCATTGATGTGTGTTGAATTTTACCTTATACTAAAAGTTGCTGGCGCAACAAAGAAACTGATGTGGCAGCTTATAGCTTTATCAACTGCAATGTTGGTTTTCGGTTATCTTGGTGAAACAATCGCAGACAGTGCTGTATTCTATGGAACCATTTCGGGAATTGCATATTTTGTAATTGTTTACATGATATGGTTAGGTCCTGCAAAAAAACTTGCAACTGATGCAGGCGGAGATGTTCTTCAGGCACATAAGTATTTATGCTGGTTCGTTCTTGTT ILTVPLMCVEFYLILKVAGATKKLMWQLIALSTAMLVFGYLGETIADSAVFYGTISGIAYFVIVYMIWLGPAKKLATDAGGDVLQAHKYLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACGGTACCATTGATGTGTGTTGAATTTTACCTTATACTAAAAGTT---------GCT------GGCGCAACAAAG---AAACTG------------------------------------ATGTGGCAG---CTTATAGCTTTATCAACTGCAATGTTGGTTTTCGGTTATCTTGGTGAA---------ACA------------------ATC------GCA---------------------------------------------------------------------------------------------------GACAGTGCT------------------GTATTCTAT---GGAACCATTTCGGGAATTGCATATTTTGTAATTGTTTACATGATA---------------TGG------TTA---GGTCCTGCAAAAAAACTTGCAACTGAT------GCA---GGCGGAGAT---GTT---CTT---CAG---GCA---CAT---AAG---TATTTA---TGCTGGTTCGTTCTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-KL------------MWQ-LIALSTAMLVFGYLGE---T------I--A---------------------------------DSA------VFY-GTISGIAYFVIVYMI-----W--L-GPAKKLATD--A-GGD-V-L-Q-A-H-K-YL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_KJ928625 [II-CFB-b] PRGD_OTU044_75e234fa2f291c780586c99a42cc24a2 gb|KJ928625| PRGD_OTU044_75e234fa2f291c780586c99a42cc24a2, putative proteorhodopsin gene, partial cds. PRGD_OTU044_75e234fa2f291c780586c99a42cc24a2, putative proteorhodopsin gene, partial cds. KJ928625 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) ATTTTAACGGTACCATTGATGTGTGTTGAATTTTACCTTATACTAAAAGTTGCTGGTGCAACAAAGAAACTGATGTGGCAGCTTATAGGTCTATCAACTGTAATGTTGGTTTTCGGTTATCTCGGTGAAACAATCGCAGACAGCGCTGTATTCTATGGAACTATTTCGGGAATTGCATATTTTGTAATTGTTTACATGATATGGTTAGGTCCTGCAAAAAAACTTGCAACTGATGCAGGCGGAGATGTTCTTCAGGCACACAAATACTTATGCTGGTTTGTTCTTGTT ILTVPLMCVEFYLILKVAGATKKLMWQLIGLSTVMLVFGYLGETIADSAVFYGTISGIAYFVIVYMIWLGPAKKLATDAGGDVLQAHKYLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACGGTACCATTGATGTGTGTTGAATTTTACCTTATACTAAAAGTT---------GCT------GGTGCAACAAAG---AAACTG------------------------------------ATGTGGCAG---CTTATAGGTCTATCAACTGTAATGTTGGTTTTCGGTTATCTCGGTGAA---------ACA------------------ATC------GCA---------------------------------------------------------------------------------------------------GACAGCGCT------------------GTATTCTAT---GGAACTATTTCGGGAATTGCATATTTTGTAATTGTTTACATGATA---------------TGG------TTA---GGTCCTGCAAAAAAACTTGCAACTGAT------GCA---GGCGGAGAT---GTT---CTT---CAG---GCA---CAC---AAA---TACTTA---TGCTGGTTTGTTCTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-KL------------MWQ-LIGLSTVMLVFGYLGE---T------I--A---------------------------------DSA------VFY-GTISGIAYFVIVYMI-----W--L-GPAKKLATD--A-GGD-V-L-Q-A-H-K-YL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_KJ928635 [II-CFB-b] PRGD_OTU044_f81dbfa99ae29169060b0684db2ed8e4 gb|KJ928635| PRGD_OTU044_f81dbfa99ae29169060b0684db2ed8e4, putative proteorhodopsin gene, partial cds. PRGD_OTU044_f81dbfa99ae29169060b0684db2ed8e4, putative proteorhodopsin gene, partial cds. KJ928635 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (33.762, 29.175), Indian Ocean (-35.05, 23.73; -14.48, 113.45) ATTTTAACGGTACCATTGATGTGTGTTGAATTTTACCTTATACTAAAAGTTGCTGGTGCAACAAAGAAACTGATGTGGCAGCTCATAGGTCTATCAACTGTAATGTTGGTTTTCGGTTATCTCGGTGAAACAATCGCAGACAGCGCTGTATTCTATGGGACTATTTCGGGAATTGCATATTTTGTAATTGTTTACATGATATGGTTAGGTCCTGCAAAAAAACTTGCAACTGATGCAGGCGGAGATGTTCTTCAGGCACATAAATACTTATGCTGGTTCGTTCTTGTT ILTVPLMCVEFYLILKVAGATKKLMWQLIGLSTVMLVFGYLGETIADSAVFYGTISGIAYFVIVYMIWLGPAKKLATDAGGDVLQAHKYLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACGGTACCATTGATGTGTGTTGAATTTTACCTTATACTAAAAGTT---------GCT------GGTGCAACAAAG---AAACTG------------------------------------ATGTGGCAG---CTCATAGGTCTATCAACTGTAATGTTGGTTTTCGGTTATCTCGGTGAA---------ACA------------------ATC------GCA---------------------------------------------------------------------------------------------------GACAGCGCT------------------GTATTCTAT---GGGACTATTTCGGGAATTGCATATTTTGTAATTGTTTACATGATA---------------TGG------TTA---GGTCCTGCAAAAAAACTTGCAACTGAT------GCA---GGCGGAGAT---GTT---CTT---CAG---GCA---CAT---AAA---TACTTA---TGCTGGTTCGTTCTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-KL------------MWQ-LIGLSTVMLVFGYLGE---T------I--A---------------------------------DSA------VFY-GTISGIAYFVIVYMI-----W--L-GPAKKLATD--A-GGD-V-L-Q-A-H-K-YL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_KJ928618 [II-CFB-b] PRGD_OTU044_091ded1f086edad15f1d651d4279ba39 gb|KJ928618| PRGD_OTU044_091ded1f086edad15f1d651d4279ba39, putative proteorhodopsin gene, partial cds. PRGD_OTU044_091ded1f086edad15f1d651d4279ba39, putative proteorhodopsin gene, partial cds. KJ928618 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Mediterranean Sea (33.762, 29.175) ATTTTAACGGTACCATTGATGTGTGTTGAATTTTACCTTATACTAAAAGTTGCTGGCGCAACAAAGAAACTGATGTGGCAGCTTATAGCTTTATCAACTGCAATGTTGGTTTTCGGTTATCTTGGTGAAACAATCGCAGACAGTGCTGTATTCTATGGATCTCTTTCGGGAATTGCATATTTTGTAATTGTTTACATGATATGGTTAGGTCCTGCAAAAAAACTTGCAACTGATGCAGGCGGAGATGTTCTTCAGGCACACAAATACTTATGTTGGTTCGTTCTTGTT ILTVPLMCVEFYLILKVAGATKKLMWQLIALSTAMLVFGYLGETIADSAVFYGSLSGIAYFVIVYMIWLGPAKKLATDAGGDVLQAHKYLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACGGTACCATTGATGTGTGTTGAATTTTACCTTATACTAAAAGTT---------GCT------GGCGCAACAAAG---AAACTG------------------------------------ATGTGGCAG---CTTATAGCTTTATCAACTGCAATGTTGGTTTTCGGTTATCTTGGTGAA---------ACA------------------ATC------GCA---------------------------------------------------------------------------------------------------GACAGTGCT------------------GTATTCTAT---GGATCTCTTTCGGGAATTGCATATTTTGTAATTGTTTACATGATA---------------TGG------TTA---GGTCCTGCAAAAAAACTTGCAACTGAT------GCA---GGCGGAGAT---GTT---CTT---CAG---GCA---CAC---AAA---TACTTA---TGTTGGTTCGTTCTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-KL------------MWQ-LIALSTAMLVFGYLGE---T------I--A---------------------------------DSA------VFY-GSLSGIAYFVIVYMI-----W--L-GPAKKLATD--A-GGD-V-L-Q-A-H-K-YL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_KJ928634 [II-CFB-b] PRGD_OTU044_f3b8a5e17c1952499ac57c52fd1c1639 gb|KJ928634| PRGD_OTU044_f3b8a5e17c1952499ac57c52fd1c1639, putative proteorhodopsin gene, partial cds. PRGD_OTU044_f3b8a5e17c1952499ac57c52fd1c1639, putative proteorhodopsin gene, partial cds. KJ928634 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTTTAACGGTACCATTGATGTGTGTTGAATTTTACCTTATACTAAAAGTTGCTGGCGCAACAAAGAAACTGATGTGGCAGCTTATAGGTCTATCAACTGCAATGTTGGTTTTCGGTTATCTTGGTGAAACAATCACAGACAGTGCTGTATTCTATGGATCTCTTTCGGGAATTGCATATTTTGTAATTGTTTACATGATATGGTTAGGTCCTGCAAAAAAACTTGCAACTGATGCAGGCGGAGATGTTCTTCAGGCACACAAATACTTATGTTGGTTCGTTCTTGTT ILTVPLMCVEFYLILKVAGATKKLMWQLIGLSTAMLVFGYLGETITDSAVFYGSLSGIAYFVIVYMIWLGPAKKLATDAGGDVLQAHKYLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACGGTACCATTGATGTGTGTTGAATTTTACCTTATACTAAAAGTT---------GCT------GGCGCAACAAAG---AAACTG------------------------------------ATGTGGCAG---CTTATAGGTCTATCAACTGCAATGTTGGTTTTCGGTTATCTTGGTGAA---------ACA------------------ATC------ACA---------------------------------------------------------------------------------------------------GACAGTGCT------------------GTATTCTAT---GGATCTCTTTCGGGAATTGCATATTTTGTAATTGTTTACATGATA---------------TGG------TTA---GGTCCTGCAAAAAAACTTGCAACTGAT------GCA---GGCGGAGAT---GTT---CTT---CAG---GCA---CAC---AAA---TACTTA---TGTTGGTTCGTTCTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-KL------------MWQ-LIGLSTAMLVFGYLGE---T------I--T---------------------------------DSA------VFY-GSLSGIAYFVIVYMI-----W--L-GPAKKLATD--A-GGD-V-L-Q-A-H-K-YL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_KJ928620 [II-CFB-b] PRGD_OTU044_2787ff1eea72755aa816825e110df3e6 gb|KJ928620| PRGD_OTU044_2787ff1eea72755aa816825e110df3e6, putative proteorhodopsin gene, partial cds. PRGD_OTU044_2787ff1eea72755aa816825e110df3e6, putative proteorhodopsin gene, partial cds. KJ928620 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) ATTTTAACGGTACCATTGATGTGTGTTGAATTTTACCTTATACTAAAAGTTGCTGGCGCAACAAAGAAACTGATGTGGCAGCTTATAGGTCTATCAACTGTAATGTTGGTTTTCGGTTATCTTGGTGAAACAATCACAGACAGTGCCGAATTCTATGGAACTATTTCGGGAATTGCATATTTTGTAATTGTTTACATGATATGGTTAGGTCCTGCAAAAAAACTTGCAACTGATGCAGGCGGAGATGTTCTTCAGGCACATAAATACTTATGTTGGTTCGTTCTTGTT ILTVPLMCVEFYLILKVAGATKKLMWQLIGLSTVMLVFGYLGETITDSAEFYGTISGIAYFVIVYMIWLGPAKKLATDAGGDVLQAHKYLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACGGTACCATTGATGTGTGTTGAATTTTACCTTATACTAAAAGTT---------GCT------GGCGCAACAAAG---AAACTG------------------------------------ATGTGGCAG---CTTATAGGTCTATCAACTGTAATGTTGGTTTTCGGTTATCTTGGTGAA---------ACA------------------ATC------ACA---------------------------------------------------------------------------------------------------GACAGTGCC------------------GAATTCTAT---GGAACTATTTCGGGAATTGCATATTTTGTAATTGTTTACATGATA---------------TGG------TTA---GGTCCTGCAAAAAAACTTGCAACTGAT------GCA---GGCGGAGAT---GTT---CTT---CAG---GCA---CAT---AAA---TACTTA---TGTTGGTTCGTTCTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-KL------------MWQ-LIGLSTVMLVFGYLGE---T------I--T---------------------------------DSA------EFY-GTISGIAYFVIVYMI-----W--L-GPAKKLATD--A-GGD-V-L-Q-A-H-K-YL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_KJ928630 [II-CFB-b] PRGD_OTU044_daa7102a25e1e247bd1db83f7fe25d72 gb|KJ928630| PRGD_OTU044_daa7102a25e1e247bd1db83f7fe25d72, putative proteorhodopsin gene, partial cds. PRGD_OTU044_daa7102a25e1e247bd1db83f7fe25d72, putative proteorhodopsin gene, partial cds. KJ928630 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTTTAACGGTACCATTAATGTGTGTTGAGTTTTACCTAATCTTAAAAGTTGCTGGCGCAACGAAAAAACTTATGTGGCAGCTGATAGGTCTATCAACTGTAATGTTGGTTTTCGGTTATTTAGGTGAAACAATTGCTGACAGTGCCGTATTTTATGGAACAATCTCAGGCCTTGCATATTTTGTAATTGTTTACATGATTTGGTTAGGCCCTGCAAAAAAACTTGCAACTGATGCAGGTGGAGATGTTCTTCAGGCACATAAATACTTGTGTTGGTTCGTTCTTGTT ILTVPLMCVEFYLILKVAGATKKLMWQLIGLSTVMLVFGYLGETIADSAVFYGTISGLAYFVIVYMIWLGPAKKLATDAGGDVLQAHKYLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACGGTACCATTAATGTGTGTTGAGTTTTACCTAATCTTAAAAGTT---------GCT------GGCGCAACGAAA---AAACTT------------------------------------ATGTGGCAG---CTGATAGGTCTATCAACTGTAATGTTGGTTTTCGGTTATTTAGGTGAA---------ACA------------------ATT------GCT---------------------------------------------------------------------------------------------------GACAGTGCC------------------GTATTTTAT---GGAACAATCTCAGGCCTTGCATATTTTGTAATTGTTTACATGATT---------------TGG------TTA---GGCCCTGCAAAAAAACTTGCAACTGAT------GCA---GGTGGAGAT---GTT---CTT---CAG---GCA---CAT---AAA---TACTTG---TGTTGGTTCGTTCTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-KL------------MWQ-LIGLSTVMLVFGYLGE---T------I--A---------------------------------DSA------VFY-GTISGLAYFVIVYMI-----W--L-GPAKKLATD--A-GGD-V-L-Q-A-H-K-YL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_KJ928617 [II-CFB-b] PRGD_OTU044_07808cfa9f6d5e6359141e7d7a9d2b01 gb|KJ928617| PRGD_OTU044_07808cfa9f6d5e6359141e7d7a9d2b01, putative proteorhodopsin gene, partial cds. PRGD_OTU044_07808cfa9f6d5e6359141e7d7a9d2b01, putative proteorhodopsin gene, partial cds. KJ928617 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-14.48, 113.45; -33.28, 45.35) ATTTTAACAGTACCTTTAATGTGTGTTGAATTTTACTTAATACTAAAAGTTGCTGGTGCGACTAAGAAATTGATGTGGCAATTAATTGGCCTTTCAACTGTAATGTTGGTATTCGGTTATCTTGGTGAAACCATTAAAGACAGCGCTGAATTTTACGGTACTATTTCTGGTATTGCATATTTTGTGATAGCATACATGATTTGGTTAGGTCCAGCAAAGAAACTTGCTGTAGCAGCAGGAGGAGATGTTCTTCAAGCTCACAAATACTTGTGCTGGTTTGTATTAGTA ILTVPLMCVEFYLILKVAGATKKLMWQLIGLSTVMLVFGYLGETIKDSAEFYGTISGIAYFVIAYMIWLGPAKKLAVAAGGDVLQAHKYLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACAGTACCTTTAATGTGTGTTGAATTTTACTTAATACTAAAAGTT---------GCT------GGTGCGACTAAG---AAATTG------------------------------------ATGTGGCAA---TTAATTGGCCTTTCAACTGTAATGTTGGTATTCGGTTATCTTGGTGAA---------ACC------------------ATT------AAA---------------------------------------------------------------------------------------------------GACAGCGCT------------------GAATTTTAC---GGTACTATTTCTGGTATTGCATATTTTGTGATAGCATACATGATT---------------TGG------TTA---GGTCCAGCAAAGAAACTTGCTGTAGCA------GCA---GGAGGAGAT---GTT---CTT---CAA---GCT---CAC---AAA---TACTTG---TGCTGGTTTGTATTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-KL------------MWQ-LIGLSTVMLVFGYLGE---T------I--K---------------------------------DSA------EFY-GTISGIAYFVIAYMI-----W--L-GPAKKLAVA--A-GGD-V-L-Q-A-H-K-YL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_KJ928629 [II-CFB-b] PRGD_OTU044_da76d36b9d38447eb54dab3265db2f87 gb|KJ928629| PRGD_OTU044_da76d36b9d38447eb54dab3265db2f87, putative proteorhodopsin gene, partial cds. PRGD_OTU044_da76d36b9d38447eb54dab3265db2f87, putative proteorhodopsin gene, partial cds. KJ928629 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097) ATTTTAACAGTACCTTTAATGTGTGTTGAATTTTACTTAATACTAAAAGTTGCTGGTGCGACTAAGAAATTGATGTGGCAATTAATTGGCCTTTCAACTGTAATGTTGGTATTCGGTTATCTTGGTGAAACCATTAAAGACAGCGCTGTATTTTACGGTACTATTTCTGGTATTGCATATTTTGTGATAGCATTCATGATTTGGTTAGGTCCAGCAAAGAAACTTGCTGTAGCTGCAGGAGGAGATGTTCTTCAAGCTCACAAATACTTGTGCTGGTTTGTATTAGTA ILTVPLMCVEFYLILKVAGATKKLMWQLIGLSTVMLVFGYLGETIKDSAVFYGTISGIAYFVIAFMIWLGPAKKLAVAAGGDVLQAHKYLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACAGTACCTTTAATGTGTGTTGAATTTTACTTAATACTAAAAGTT---------GCT------GGTGCGACTAAG---AAATTG------------------------------------ATGTGGCAA---TTAATTGGCCTTTCAACTGTAATGTTGGTATTCGGTTATCTTGGTGAA---------ACC------------------ATT------AAA---------------------------------------------------------------------------------------------------GACAGCGCT------------------GTATTTTAC---GGTACTATTTCTGGTATTGCATATTTTGTGATAGCATTCATGATT---------------TGG------TTA---GGTCCAGCAAAGAAACTTGCTGTAGCT------GCA---GGAGGAGAT---GTT---CTT---CAA---GCT---CAC---AAA---TACTTG---TGCTGGTTTGTATTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-KL------------MWQ-LIGLSTVMLVFGYLGE---T------I--K---------------------------------DSA------VFY-GTISGIAYFVIAFMI-----W--L-GPAKKLAVA--A-GGD-V-L-Q-A-H-K-YL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_KJ928628 [II-CFB-b] PRGD_OTU044_c22f6d4b53b7458d05dd3e0860fb0ae3 gb|KJ928628| PRGD_OTU044_c22f6d4b53b7458d05dd3e0860fb0ae3, putative proteorhodopsin gene, partial cds. PRGD_OTU044_c22f6d4b53b7458d05dd3e0860fb0ae3, putative proteorhodopsin gene, partial cds. KJ928628 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTTTAACAGTACCCTTAATGTGTGTTGAATTTTACTTAATACTAAAAGTTGCTGGTGCGACTAAGAAATTGATGTGGCAATTAATTGGCCTTTCAACTGTAATGTTGGTATTCGGTTATCTTGGTGAAACCATTAAAGACAGCGCTGAATTTTACGGTACTATTTCTGGTGTTGCATATTTTGTGATAGCATACATGATTTGGTTAGGTCCAGCAAAGAAACTTGCTGTAGCTGCAGGAGGAGATGTTCTTCAAGCTCACAAATACTTGTGCTGGTTTGTATTAGTA ILTVPLMCVEFYLILKVAGATKKLMWQLIGLSTVMLVFGYLGETIKDSAEFYGTISGVAYFVIAYMIWLGPAKKLAVAAGGDVLQAHKYLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACAGTACCCTTAATGTGTGTTGAATTTTACTTAATACTAAAAGTT---------GCT------GGTGCGACTAAG---AAATTG------------------------------------ATGTGGCAA---TTAATTGGCCTTTCAACTGTAATGTTGGTATTCGGTTATCTTGGTGAA---------ACC------------------ATT------AAA---------------------------------------------------------------------------------------------------GACAGCGCT------------------GAATTTTAC---GGTACTATTTCTGGTGTTGCATATTTTGTGATAGCATACATGATT---------------TGG------TTA---GGTCCAGCAAAGAAACTTGCTGTAGCT------GCA---GGAGGAGAT---GTT---CTT---CAA---GCT---CAC---AAA---TACTTG---TGCTGGTTTGTATTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-KL------------MWQ-LIGLSTVMLVFGYLGE---T------I--K---------------------------------DSA------EFY-GTISGVAYFVIAYMI-----W--L-GPAKKLAVA--A-GGD-V-L-Q-A-H-K-YL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_KJ928623 [II-CFB-b] PRGD_OTU044_55f5bc69f0f40af8fea87fa6bd1cbff5 gb|KJ928623| PRGD_OTU044_55f5bc69f0f40af8fea87fa6bd1cbff5, putative proteorhodopsin gene, partial cds. PRGD_OTU044_55f5bc69f0f40af8fea87fa6bd1cbff5, putative proteorhodopsin gene, partial cds. KJ928623 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-33.28, 45.35) ATTTTAACAGTACCTTTAATGTGTGTTGAATTTTACTTGATACTAAAAGTTGCTGGTGCGACTAAGAAATTGATGTGGCAATTAATTGGCCTTTCAACTGTAATGTTGGTATTCGGTTATCTTGGTGAAACCATTAAAGATAGCGCTGAATTTTACGGTACTATTTCTGGTATTGCATATTTTGTAATAGCATACATGATTTGGTTAGGTCCAGCAAAGAAACTTGCTGTAGCTGCAGGAGGAGATGTTCTTCAAGCTCACAAATACTTGTGCTGGTTTGTATTAGTA ILTVPLMCVEFYLILKVAGATKKLMWQLIGLSTVMLVFGYLGETIKDSAEFYGTISGIAYFVIAYMIWLGPAKKLAVAAGGDVLQAHKYLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACAGTACCTTTAATGTGTGTTGAATTTTACTTGATACTAAAAGTT---------GCT------GGTGCGACTAAG---AAATTG------------------------------------ATGTGGCAA---TTAATTGGCCTTTCAACTGTAATGTTGGTATTCGGTTATCTTGGTGAA---------ACC------------------ATT------AAA---------------------------------------------------------------------------------------------------GATAGCGCT------------------GAATTTTAC---GGTACTATTTCTGGTATTGCATATTTTGTAATAGCATACATGATT---------------TGG------TTA---GGTCCAGCAAAGAAACTTGCTGTAGCT------GCA---GGAGGAGAT---GTT---CTT---CAA---GCT---CAC---AAA---TACTTG---TGCTGGTTTGTATTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-KL------------MWQ-LIGLSTVMLVFGYLGE---T------I--K---------------------------------DSA------EFY-GTISGIAYFVIAYMI-----W--L-GPAKKLAVA--A-GGD-V-L-Q-A-H-K-YL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_KJ928619 [II-CFB-b] PRGD_OTU044_0bc9c60b82c1e85f2443457a6716ad78 gb|KJ928619| PRGD_OTU044_0bc9c60b82c1e85f2443457a6716ad78, putative proteorhodopsin gene, partial cds. PRGD_OTU044_0bc9c60b82c1e85f2443457a6716ad78, putative proteorhodopsin gene, partial cds. KJ928619 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) ATTTTAACAGTACCTTTAATGTGTGTTGAATTTTACTTAATACTAAAAGTTGCTGGTGCGACTAAGAAATTGATGTGGCAATTAATTGGCCTTTCAACTGTAATGTTGGTATTCGGTTATCTTGGTGAAACCATTAAAGACAGCGCTGAATTTTACGGTACTATTTCTGGTCTTGCATATTTTGTAATTGCTTACATGATTTGGTTAGGTCCAGCAAAGAAACTTGCTGTAGCTGCAGGAGGAGATGTTCTTCAAGCTCATAAATACTTGTGCTGGTTTGTATTAGTA ILTVPLMCVEFYLILKVAGATKKLMWQLIGLSTVMLVFGYLGETIKDSAEFYGTISGLAYFVIAYMIWLGPAKKLAVAAGGDVLQAHKYLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACAGTACCTTTAATGTGTGTTGAATTTTACTTAATACTAAAAGTT---------GCT------GGTGCGACTAAG---AAATTG------------------------------------ATGTGGCAA---TTAATTGGCCTTTCAACTGTAATGTTGGTATTCGGTTATCTTGGTGAA---------ACC------------------ATT------AAA---------------------------------------------------------------------------------------------------GACAGCGCT------------------GAATTTTAC---GGTACTATTTCTGGTCTTGCATATTTTGTAATTGCTTACATGATT---------------TGG------TTA---GGTCCAGCAAAGAAACTTGCTGTAGCT------GCA---GGAGGAGAT---GTT---CTT---CAA---GCT---CAT---AAA---TACTTG---TGCTGGTTTGTATTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-KL------------MWQ-LIGLSTVMLVFGYLGE---T------I--K---------------------------------DSA------EFY-GTISGLAYFVIAYMI-----W--L-GPAKKLAVA--A-GGD-V-L-Q-A-H-K-YL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_KJ928636 [II-CFB-b] PRGD_OTU044_f8c0115cf4bd76547838920632821750 gb|KJ928636| PRGD_OTU044_f8c0115cf4bd76547838920632821750, putative proteorhodopsin gene, partial cds. PRGD_OTU044_f8c0115cf4bd76547838920632821750, putative proteorhodopsin gene, partial cds. KJ928636 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683) ATTTTAACAGTACCTTTAATGTGTGTTGAATTTTACTTAATACTAAAAGTTGCTGGTGCTACTAAGAAATTGATGTGGCAATTAATTGCCCTTTCAACTGTAATGTTGGTATTCGGTTATCTTGGTGAAACCACTAAAGATAGTGCTGTCTTTTACGGTACTGTTTCTGGTCTTGCATATTTTGTAATCGCATACATGATTTGGTTAGGTCCGGCAAAGAAACTTGCTGTAGCTGCAGGAGGAGATGTTCTTCAAGCTCACAAATACTTATGCTGGTTTGTATTAGTA ILTVPLMCVEFYLILKVAGATKKLMWQLIALSTVMLVFGYLGETTKDSAVFYGTVSGLAYFVIAYMIWLGPAKKLAVAAGGDVLQAHKYLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACAGTACCTTTAATGTGTGTTGAATTTTACTTAATACTAAAAGTT---------GCT------GGTGCTACTAAG---AAATTG------------------------------------ATGTGGCAA---TTAATTGCCCTTTCAACTGTAATGTTGGTATTCGGTTATCTTGGTGAA---------ACC------------------ACT------AAA---------------------------------------------------------------------------------------------------GATAGTGCT------------------GTCTTTTAC---GGTACTGTTTCTGGTCTTGCATATTTTGTAATCGCATACATGATT---------------TGG------TTA---GGTCCGGCAAAGAAACTTGCTGTAGCT------GCA---GGAGGAGAT---GTT---CTT---CAA---GCT---CAC---AAA---TACTTA---TGCTGGTTTGTATTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-KL------------MWQ-LIALSTVMLVFGYLGE---T------T--K---------------------------------DSA------VFY-GTVSGLAYFVIAYMI-----W--L-GPAKKLAVA--A-GGD-V-L-Q-A-H-K-YL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_KJ928637 [II-CFB-b] PRGD_OTU044_f92b6b2f6ce6eb2d029b915faf82c1c2 gb|KJ928637| PRGD_OTU044_f92b6b2f6ce6eb2d029b915faf82c1c2, putative proteorhodopsin gene, partial cds. PRGD_OTU044_f92b6b2f6ce6eb2d029b915faf82c1c2, putative proteorhodopsin gene, partial cds. KJ928637 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683) ATTTTAACTGTACCTTTAATGTGTGTTGAATTTTACTTAATACTTAAAGTTGCTGGTGCGACTAAGAAATTGATGTGGCAATTAATTGGCCTTTCAACTGCAATGTTGGTATTCGGTTATCTTGGTGAAACCACTGACAGTGCTGAGTTTTATGGTACAATTTCTGGTATTGCATATTTCGTAATCGTATACATGATTTGGTTTGGTCCAGCAAAGAAACTTGCTGTAGCTTCAGGAGGAGATGTTCTTCAAGCTCACAAATACTTATGCTGGTTTGTATTAGTA ILTVPLMCVEFYLILKVAGATKKLMWQLIGLSTAMLVFGYLGETTDSAEFYGTISGIAYFVIVYMIWFGPAKKLAVASGGDVLQAHKYLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACTGTACCTTTAATGTGTGTTGAATTTTACTTAATACTTAAAGTT---------GCT------GGTGCGACTAAG---AAATTG------------------------------------ATGTGGCAA---TTAATTGGCCTTTCAACTGCAATGTTGGTATTCGGTTATCTTGGTGAA---------ACC------------------ACT------------------------------------------------------------------------------------------------------------GACAGTGCT------------------GAGTTTTAT---GGTACAATTTCTGGTATTGCATATTTCGTAATCGTATACATGATT---------------TGG------TTT---GGTCCAGCAAAGAAACTTGCTGTAGCT------TCA---GGAGGAGAT---GTT---CTT---CAA---GCT---CAC---AAA---TACTTA---TGCTGGTTTGTATTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-KL------------MWQ-LIGLSTAMLVFGYLGE---T------T------------------------------------DSA------EFY-GTISGIAYFVIVYMI-----W--F-GPAKKLAVA--S-GGD-V-L-Q-A-H-K-YL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_KJ928616 [II-CFB-b] PRGD_OTU044_otuREP_fc812a00ccb9c4a188fa8707721b198c gb|KJ928616| PRGD_OTU044_otuREP_fc812a00ccb9c4a188fa8707721b198c, putative proteorhodopsin gene, partial cds. PRGD_OTU044_otuREP_fc812a00ccb9c4a188fa8707721b198c, putative proteorhodopsin gene, partial cds. KJ928616 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) ATTTTAACTGTACCATTAATGTGTGTTGAATTTTACTTAATACTTAAAGTTGCTGGTGCGACTAAGAAATTGATGTGGCAATTAATTGGCCTTTCAACTGCAATGTTGGTATTCGGTTATCTTGGTGAAACCACTGACAGTGCTGAGTTTTATGGTACAGTTTCTGGTATTGCATATTTTGTAATCGTATACATGATTTGGTTAGGTCCAGCAAAGAAACTTGCTGTAGCTTCAGGAGGAGATGTTCTTCAAGCTCACAAATACTTATGCTGGTTTGTATTAGTA ILTVPLMCVEFYLILKVAGATKKLMWQLIGLSTAMLVFGYLGETTDSAEFYGTVSGIAYFVIVYMIWLGPAKKLAVASGGDVLQAHKYLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACTGTACCATTAATGTGTGTTGAATTTTACTTAATACTTAAAGTT---------GCT------GGTGCGACTAAG---AAATTG------------------------------------ATGTGGCAA---TTAATTGGCCTTTCAACTGCAATGTTGGTATTCGGTTATCTTGGTGAA---------ACC------------------ACT------------------------------------------------------------------------------------------------------------GACAGTGCT------------------GAGTTTTAT---GGTACAGTTTCTGGTATTGCATATTTTGTAATCGTATACATGATT---------------TGG------TTA---GGTCCAGCAAAGAAACTTGCTGTAGCT------TCA---GGAGGAGAT---GTT---CTT---CAA---GCT---CAC---AAA---TACTTA---TGCTGGTTTGTATTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-KL------------MWQ-LIGLSTAMLVFGYLGE---T------T------------------------------------DSA------EFY-GTVSGIAYFVIVYMI-----W--L-GPAKKLAVA--S-GGD-V-L-Q-A-H-K-YL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_KJ928627 [II-CFB-b] PRGD_OTU044_7a72be4afd3fba307ac095deea2de2bf gb|KJ928627| PRGD_OTU044_7a72be4afd3fba307ac095deea2de2bf, putative proteorhodopsin gene, partial cds. PRGD_OTU044_7a72be4afd3fba307ac095deea2de2bf, putative proteorhodopsin gene, partial cds. KJ928627 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTCTTACTGTACCTTTAATGTGTGTTGAATTTTACCTCATACTTAAAGTTGCTGGAGCTACTCAAAAATTAATGTGGCAGCTAATTGGCTTATCTACTGTAATGTTAGTATTCGGTTATTTAGGTGAAGTAAATACAGATAGTGCTGTAATGTATGGTACTATTTCAGGTTTAGCTTACTTTGTAATCGCTTACATGATTTGGTTAGGGCCTGCTAAAAAGCTTGCTGTTGCTGCTGGAGGTGATGTCTTACAAGCTCATAAATATTTATGCTGGTTTGTTCTAGTT ILTVPLMCVEFYLILKVAGATQKLMWQLIGLSTVMLVFGYLGEVNTDSAVMYGTISGLAYFVIAYMIWLGPAKKLAVAAGGDVLQAHKYLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTACTGTACCTTTAATGTGTGTTGAATTTTACCTCATACTTAAAGTT---------GCT------GGAGCTACTCAA---AAATTA------------------------------------ATGTGGCAG---CTAATTGGCTTATCTACTGTAATGTTAGTATTCGGTTATTTAGGTGAA------------------------------GTA------AATACA------------------------------------------------------------------------------------------------GATAGTGCT------------------GTAATGTAT---GGTACTATTTCAGGTTTAGCTTACTTTGTAATCGCTTACATGATT---------------TGG------TTA---GGGCCTGCTAAAAAGCTTGCTGTTGCT------GCT---GGAGGTGAT---GTC---TTA---CAA---GCT---CAT---AAA---TATTTA---TGCTGGTTTGTTCTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATQ-KL------------MWQ-LIGLSTVMLVFGYLGE----------V--NT--------------------------------DSA------VMY-GTISGLAYFVIAYMI-----W--L-GPAKKLAVA--A-GGD-V-L-Q-A-H-K-YL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_KJ928632 [II-CFB-b] PRGD_OTU044_e891879809111414f81b12921745e94b gb|KJ928632| PRGD_OTU044_e891879809111414f81b12921745e94b, putative proteorhodopsin gene, partial cds. PRGD_OTU044_e891879809111414f81b12921745e94b, putative proteorhodopsin gene, partial cds. KJ928632 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTCTTACTGTACCTTTAATGTGTGTTGAATTTTACCTCATACTTAAAGTTGCTGGAGCTACTCAAAAATTAATGTGGCAGCTAATTGGCTTATCTACTGTAATGTTAGTATTCGGTTATTTAGGTGAAGTAAATACAGATAGTGCTGTAATGTATGGTACCATTTCAGGTTTAGCTTACTTTGTAATCGCTTACATGATTTGGTTAGGACCTGCTAAAAAGCTTGCTGTTGCTGCTGGAGGTGATGTCTTACAAGCTCATAAATATTTATGCTGGTTTGTTCTAGTT ILTVPLMCVEFYLILKVAGATQKLMWQLIGLSTVMLVFGYLGEVNTDSAVMYGTISGLAYFVIAYMIWLGPAKKLAVAAGGDVLQAHKYLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTACTGTACCTTTAATGTGTGTTGAATTTTACCTCATACTTAAAGTT---------GCT------GGAGCTACTCAA---AAATTA------------------------------------ATGTGGCAG---CTAATTGGCTTATCTACTGTAATGTTAGTATTCGGTTATTTAGGTGAA------------------------------GTA------AATACA------------------------------------------------------------------------------------------------GATAGTGCT------------------GTAATGTAT---GGTACCATTTCAGGTTTAGCTTACTTTGTAATCGCTTACATGATT---------------TGG------TTA---GGACCTGCTAAAAAGCTTGCTGTTGCT------GCT---GGAGGTGAT---GTC---TTA---CAA---GCT---CAT---AAA---TATTTA---TGCTGGTTTGTTCTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATQ-KL------------MWQ-LIGLSTVMLVFGYLGE----------V--NT--------------------------------DSA------VMY-GTISGLAYFVIAYMI-----W--L-GPAKKLAVA--A-GGD-V-L-Q-A-H-K-YL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_KJ928622 [II-CFB-b] PRGD_OTU044_475e5e98b9e2928a984b55571f35ded4 gb|KJ928622| PRGD_OTU044_475e5e98b9e2928a984b55571f35ded4, putative proteorhodopsin gene, partial cds. PRGD_OTU044_475e5e98b9e2928a984b55571f35ded4, putative proteorhodopsin gene, partial cds. KJ928622 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-33.28, 45.35) ATTCTTACTGTACCTTTAATGTGTGTTGAATTTTACCTCATACTTAAAGTTGCTGGAGCTACTCAAAAATTAATGTGGCAGCTAATTGGCTTATCTACTGTAATGTTAGTATTCGGTTATTTAGGTGAAGTAAATACAGATAGTGCTGTAATGTATGGTACTATTTCAGGTTTAGCTTACTTTGTAATCGCTTACATGATTTGGTTAGGGCCTGCTAAAAAGCTTGCTGTTGCTGCTGGAGGTGATGTTCTACAAGCTCACAAATACTTATGCTGGTTTGTTCTAGTT ILTVPLMCVEFYLILKVAGATQKLMWQLIGLSTVMLVFGYLGEVNTDSAVMYGTISGLAYFVIAYMIWLGPAKKLAVAAGGDVLQAHKYLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTACTGTACCTTTAATGTGTGTTGAATTTTACCTCATACTTAAAGTT---------GCT------GGAGCTACTCAA---AAATTA------------------------------------ATGTGGCAG---CTAATTGGCTTATCTACTGTAATGTTAGTATTCGGTTATTTAGGTGAA------------------------------GTA------AATACA------------------------------------------------------------------------------------------------GATAGTGCT------------------GTAATGTAT---GGTACTATTTCAGGTTTAGCTTACTTTGTAATCGCTTACATGATT---------------TGG------TTA---GGGCCTGCTAAAAAGCTTGCTGTTGCT------GCT---GGAGGTGAT---GTT---CTA---CAA---GCT---CAC---AAA---TACTTA---TGCTGGTTTGTTCTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATQ-KL------------MWQ-LIGLSTVMLVFGYLGE----------V--NT--------------------------------DSA------VMY-GTISGLAYFVIAYMI-----W--L-GPAKKLAVA--A-GGD-V-L-Q-A-H-K-YL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_KJ929301 [II-CFB-b] PRGD_OTU100_f62700aebadd61028cb9ee0b613c7484 gb|KJ929301| PRGD_OTU100_f62700aebadd61028cb9ee0b613c7484, putative proteorhodopsin gene, partial cds. PRGD_OTU100_f62700aebadd61028cb9ee0b613c7484, putative proteorhodopsin gene, partial cds. KJ929301 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45; -33.28, 45.35) ATTCTAACTGTACCATTGATGTGTGTTGAGTTCTATTTAATTCTTAAAGTAGCAGGTGCTACCAAGAAATTGATGTGGAAATTAATCGGTTTATCAACTGTGATGTTAGTAGCTGGCTATATTGGTGAATCAGGCGACAGTGCTGTTCTTTGGGGAACTATTTCAGGTCTTGCATATTTCGTAATTGCTTACATGATTTGGTTTGGTGAAGCTAAAAAACTTGCAACTGAAGCAGGTGGAGATGTTTTACAAGCTCATAAATACCTATGTTGGTTTGTTCTTGTT ILTVPLMCVEFYLILKVAGATKKLMWKLIGLSTVMLVAGYIGESGDSAVLWGTISGLAYFVIAYMIWFGEAKKLATEAGGDVLQAHKYLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTAACTGTACCATTGATGTGTGTTGAGTTCTATTTAATTCTTAAAGTA---------GCA------GGTGCTACCAAG---AAATTG------------------------------------ATGTGGAAA---TTAATCGGTTTATCAACTGTGATGTTAGTAGCTGGCTATATTGGTGAA---------TCA---------------------------------------------------------------------------------------------------GGC---------------------------GACAGTGCT------------------GTTCTTTGG---GGAACTATTTCAGGTCTTGCATATTTCGTAATTGCTTACATGATT---------------TGG------TTT---GGTGAAGCTAAAAAACTTGCAACTGAA------GCA---GGTGGAGAT---GTT---TTA---CAA---GCT---CAT---AAA---TACCTA---TGTTGGTTTGTTCTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-KL------------MWK-LIGLSTVMLVAGYIGE---S---------------------------------G---------DSA------VLW-GTISGLAYFVIAYMI-----W--F-GEAKKLATE--A-GGD-V-L-Q-A-H-K-YL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_KJ929296 [II-CFB-b] PRGD_OTU100_otuREP_1a1f63fdf60221ab8edc58f77e8d8d2a gb|KJ929296| PRGD_OTU100_otuREP_1a1f63fdf60221ab8edc58f77e8d8d2a, putative proteorhodopsin gene, partial cds. PRGD_OTU100_otuREP_1a1f63fdf60221ab8edc58f77e8d8d2a, putative proteorhodopsin gene, partial cds. KJ929296 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) ATTTTAACTGTTCCACTAATGTGTGTAGAGTTCTATCTAATACTTAAAGTAGCGGGTGCAACTAAAAATCTAATGTGGAAATTAATTGGATTATCAACTGTAATGCTTGTTACTGGTTACTTAGGTGAAACTGGTGATAGTGCTGTTATGTGGGGTACAATTTCTGGACTTGCATATTTTGTAATAGCTTACATGATATGGTTTGGTGAGGCTAAGGCTCTTGCTACTGAGGCTGGAGGAGATGTTCTTCAAGCTCACAAATACCTTTGCTGGTTTGTACTAGTA ILTVPLMCVEFYLILKVAGATKNLMWKLIGLSTVMLVTGYLGETGDSAVMWGTISGLAYFVIAYMIWFGEAKALATEAGGDVLQAHKYLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACTGTTCCACTAATGTGTGTAGAGTTCTATCTAATACTTAAAGTA---------GCG------GGTGCAACTAAA---AATCTA------------------------------------ATGTGGAAA---TTAATTGGATTATCAACTGTAATGCTTGTTACTGGTTACTTAGGTGAA---------ACT---------------------------------------------------------------------------------------------------GGT---------------------------GATAGTGCT------------------GTTATGTGG---GGTACAATTTCTGGACTTGCATATTTTGTAATAGCTTACATGATA---------------TGG------TTT---GGTGAGGCTAAGGCTCTTGCTACTGAG------GCT---GGAGGAGAT---GTT---CTT---CAA---GCT---CAC---AAA---TACCTT---TGCTGGTTTGTACTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-NL------------MWK-LIGLSTVMLVTGYLGE---T---------------------------------G---------DSA------VMW-GTISGLAYFVIAYMI-----W--F-GEAKALATE--A-GGD-V-L-Q-A-H-K-YL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_KJ929297 [II-CFB-b] PRGD_OTU100_676c575d0afc8db036e4a3bf212af1ce gb|KJ929297| PRGD_OTU100_676c575d0afc8db036e4a3bf212af1ce, putative proteorhodopsin gene, partial cds. PRGD_OTU100_676c575d0afc8db036e4a3bf212af1ce, putative proteorhodopsin gene, partial cds. KJ929297 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) ATTTTAACTGTACCGTTAATGTGTGTAGAGTTTTATCTGATATTAAGAGTAGCGGGTGCAACTAAAAATCTAATGTGGAAATTAATTGGATTATCAACTGTAATGCTTGTTGCTGGTTACTTAGGTGAAACTGGTGATAGTGCTGTTATGTGGGGTACAATTTCTGGACTTGCATATTTTGTAATAGCTTACATGATATGGTTTGGTGAGGCTAAGGCTCTTGCTACTGAGGCTGGAGGAGATGTTCTTCAAGCTCATAAATACCTTTGCTGGTTTGTACTAGTA ILTVPLMCVEFYLILRVAGATKNLMWKLIGLSTVMLVAGYLGETGDSAVMWGTISGLAYFVIAYMIWFGEAKALATEAGGDVLQAHKYLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACTGTACCGTTAATGTGTGTAGAGTTTTATCTGATATTAAGAGTA---------GCG------GGTGCAACTAAA---AATCTA------------------------------------ATGTGGAAA---TTAATTGGATTATCAACTGTAATGCTTGTTGCTGGTTACTTAGGTGAA---------------------------------------------------------------------------------------------------ACT---------GGT---------------------------GATAGTGCT------------------GTTATGTGG---GGTACAATTTCTGGACTTGCATATTTTGTAATAGCTTACATGATA---------------TGG------TTT---GGTGAGGCTAAGGCTCTTGCTACTGAG------GCT---GGAGGAGAT---GTT---CTT---CAA---GCT---CAT---AAA---TACCTT---TGCTGGTTTGTACTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILRV---A--GATK-NL------------MWK-LIGLSTVMLVAGYLGE---------------------------------T---G---------DSA------VMW-GTISGLAYFVIAYMI-----W--F-GEAKALATE--A-GGD-V-L-Q-A-H-K-YL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_KJ929298 [II-CFB-b] PRGD_OTU100_950b192b94b9679e91aadc94caddc691 gb|KJ929298| PRGD_OTU100_950b192b94b9679e91aadc94caddc691, putative proteorhodopsin gene, partial cds. PRGD_OTU100_950b192b94b9679e91aadc94caddc691, putative proteorhodopsin gene, partial cds. KJ929298 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637), Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73) ATTTTAACTGTACCATTAATGTGTGTAGAGTTTTATCTAATACTTAAAGTAGCGGGTGCAACTAAAAGCTTAATGTGGAAATTAATTGGATTATCAACTATAATGCTTGTTACTGGTTACTTAGGTGAAACTGGTGATAGTGCTGTTATGTGGGGTACTCTTTCTGGACTTGCATATTTTGTAATAGCTTACATGATATGGTTTGGTGAGGCTAAGGCTCTTGCTACTGAGGCTGGAGGAGATGTTCTTCAAGCTCACAAATACCTTTGCTGGTTTGTACTAGTA ILTVPLMCVEFYLILKVAGATKSLMWKLIGLSTIMLVTGYLGETGDSAVMWGTLSGLAYFVIAYMIWFGEAKALATEAGGDVLQAHKYLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACTGTACCATTAATGTGTGTAGAGTTTTATCTAATACTTAAAGTA---------GCG------GGTGCAACTAAA---AGCTTA------------------------------------ATGTGGAAA---TTAATTGGATTATCAACTATAATGCTTGTTACTGGTTACTTAGGTGAA---------ACT---------------------------------------------------------------------------------------------------GGT---------------------------GATAGTGCT------------------GTTATGTGG---GGTACTCTTTCTGGACTTGCATATTTTGTAATAGCTTACATGATA---------------TGG------TTT---GGTGAGGCTAAGGCTCTTGCTACTGAG------GCT---GGAGGAGAT---GTT---CTT---CAA---GCT---CAC---AAA---TACCTT---TGCTGGTTTGTACTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-SL------------MWK-LIGLSTIMLVTGYLGE---T---------------------------------G---------DSA------VMW-GTLSGLAYFVIAYMI-----W--F-GEAKALATE--A-GGD-V-L-Q-A-H-K-YL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_KJ929300 [II-CFB-b] PRGD_OTU100_e771f3a92f380da9bcf1a118ed455423 gb|KJ929300| PRGD_OTU100_e771f3a92f380da9bcf1a118ed455423, putative proteorhodopsin gene, partial cds. PRGD_OTU100_e771f3a92f380da9bcf1a118ed455423, putative proteorhodopsin gene, partial cds. KJ929300 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTTTAACTGTACCATTAATGTGTGTAGAGTTTTATCTAATACTAAAGGTAGCGGGTGCAACTAAAAATCTAATGTGGAAATTAATTGGATTATCAACTGTAATGCTTGTTACTGGTTACTTAGGTGAGACTGGTGATAGTGCTGTTATGTGGGGTACACTTTCTGGACTTGCATATTTTGTAATAGCTTACATGATATGGTTTGGTGAGGCTAAAGCTCTTGCTACTGAGGCTGGAGGAGATGTTCTTCAAGCTCACAAATACCTTTGCTGGTTTGTACTAGTA ILTVPLMCVEFYLILKVAGATKNLMWKLIGLSTVMLVTGYLGETGDSAVMWGTLSGLAYFVIAYMIWFGEAKALATEAGGDVLQAHKYLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACTGTACCATTAATGTGTGTAGAGTTTTATCTAATACTAAAGGTA---------GCG------GGTGCAACTAAA---AATCTA------------------------------------ATGTGGAAA---TTAATTGGATTATCAACTGTAATGCTTGTTACTGGTTACTTAGGTGAG---------ACT---------------------------------------------------------------------------------------------------GGT---------------------------GATAGTGCT------------------GTTATGTGG---GGTACACTTTCTGGACTTGCATATTTTGTAATAGCTTACATGATA---------------TGG------TTT---GGTGAGGCTAAAGCTCTTGCTACTGAG------GCT---GGAGGAGAT---GTT---CTT---CAA---GCT---CAC---AAA---TACCTT---TGCTGGTTTGTACTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-NL------------MWK-LIGLSTVMLVTGYLGE---T---------------------------------G---------DSA------VMW-GTLSGLAYFVIAYMI-----W--F-GEAKALATE--A-GGD-V-L-Q-A-H-K-YL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_KJ929299 [II-CFB-b] PRGD_OTU100_b3d8475f4a37f67b7b2a8b3d3cd30b62 gb|KJ929299| PRGD_OTU100_b3d8475f4a37f67b7b2a8b3d3cd30b62, putative proteorhodopsin gene, partial cds. PRGD_OTU100_b3d8475f4a37f67b7b2a8b3d3cd30b62, putative proteorhodopsin gene, partial cds. KJ929299 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTTTAACTGTACCTTTAATGTGCGTTGAATTTTATTTAATATTAAAAGTAGCTGGAGCAACCAAGTCTCTCATGTGGAAATTAATAGCATTATCTACTGTAATGCTTGTTACTGGTTACATGGGTGAAACTACTGATAGCGCTGTAATGTGGGGTACAATTTCAGGCCTAGTATATTTTGCAATTGTATATATAATTTGGTTGGGAGAAGCAAAAGCTTTAGCTGTATCAGCTGGTGGTGATGTCCTACAGGCTCATAAATACCTTTGCTGGTTTGTACTAGTA ILTVPLMCVEFYLILKVAGATKSLMWKLIALSTVMLVTGYMGETTDSAVMWGTISGLVYFAIVYIIWLGEAKALAVSAGGDVLQAHKYLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACTGTACCTTTAATGTGCGTTGAATTTTATTTAATATTAAAAGTA---------GCT------GGAGCAACCAAG---TCTCTC------------------------------------ATGTGGAAA---TTAATAGCATTATCTACTGTAATGCTTGTTACTGGTTACATGGGTGAA---------ACT------------------ACT------------------------------------------------------------------------------------------------------------GATAGCGCT------------------GTAATGTGG---GGTACAATTTCAGGCCTAGTATATTTTGCAATTGTATATATAATT---------------TGG------TTG---GGAGAAGCAAAAGCTTTAGCTGTATCA------GCT---GGTGGTGAT---GTC---CTA---CAG---GCT---CAT---AAA---TACCTT---TGCTGGTTTGTACTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-SL------------MWK-LIALSTVMLVTGYMGE---T------T------------------------------------DSA------VMW-GTISGLVYFAIVYII-----W--L-GEAKALAVS--A-GGD-V-L-Q-A-H-K-YL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_KJ929291 [II-CFB-b] PRGD_OTU099_028be4f4ae532c2379e6e02e2496b5c1 gb|KJ929291| PRGD_OTU099_028be4f4ae532c2379e6e02e2496b5c1, putative proteorhodopsin gene, partial cds. PRGD_OTU099_028be4f4ae532c2379e6e02e2496b5c1, putative proteorhodopsin gene, partial cds. KJ929291 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175) ATTTTAACAGTTCCACTAATGTGCGTTGAATTTTACTTAATTCTTCAAAAAGCTGGAGCCAAAAAAAGTCTTATGTGGAACCTGATAGCGTTATCTACTTTCATGCTTGTAACCGGATATATTGGTGAAGCTGGATTAGGAGATGCTGTTGTTTGGGGTACTGCTTCTGGTTTATCATACTTCGTTATTGTTTATATCTTATGGTTTGGTAGCGCTGGACAACTTGCTCAAAAGGCAGGTGGTGCTGTTCTAGACGCTTTCAATGCTCTTAAGTGGTTTGTACTTGTT ILTVPLMCVEFYLILQKAGAKKSLMWNLIALSTFMLVTGYIGEAGLGDAVVWGTASGLSYFVIVYILWFGSAGQLAQKAGGAVLDAFNALKWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACAGTTCCACTAATGTGCGTTGAATTTTACTTAATTCTTCAAAAA---------GCT------GGAGCCAAAAAA---AGTCTT------------------------------------ATGTGGAAC---CTGATAGCGTTATCTACTTTCATGCTTGTAACCGGATATATTGGTGAA---------GCT------------------GGA------TTAGGA---------------------------------------------------------------------------------------------------GATGCT------------------GTTGTTTGG---GGTACTGCTTCTGGTTTATCATACTTCGTTATTGTTTATATCTTA---------------TGG------TTT---GGTAGCGCTGGACAACTTGCTCAAAAG------GCA---GGTGGTGCT---GTT---CTA---GAC---GCT---TTC---AAT---GCTCTT---AAGTGGTTTGTACTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILQK---A--GAKK-SL------------MWN-LIALSTFMLVTGYIGE---A------G--LG---------------------------------DA------VVW-GTASGLSYFVIVYIL-----W--F-GSAGQLAQK--A-GGA-V-L-D-A-F-N-AL-KWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_KJ929292 [II-CFB-b] PRGD_OTU099_0e79c9622a7b87087907a4fae247ddef gb|KJ929292| PRGD_OTU099_0e79c9622a7b87087907a4fae247ddef, putative proteorhodopsin gene, partial cds. PRGD_OTU099_0e79c9622a7b87087907a4fae247ddef, putative proteorhodopsin gene, partial cds. KJ929292 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419) ATTCTAACTGTTCCATTAATGTGTGTTGAATTTTATTTAATTCTTCAAAAAGCTGGAGCACAAAAGAGCCTAATGTGGAACTTAATTCTATTATCTACTGTAATGCTTGTTACTGGATATGTTGGTGAAGCTGGCTTAGGTGATGCTGTTGTTTGGGGTACTATATCTGGTATTTCATATTTTGTAATTGTTTACATTTTATGGTTTGGTAGTGCTGGACAACTAGCTCAAAAGGCAGGAGGTGCTGTTCTTGATGCTTTTAATGCTCTTAAATGGTTCGTACTAGTA ILTVPLMCVEFYLILQKAGAQKSLMWNLILLSTVMLVTGYVGEAGLGDAVVWGTISGISYFVIVYILWFGSAGQLAQKAGGAVLDAFNALKWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTAACTGTTCCATTAATGTGTGTTGAATTTTATTTAATTCTTCAAAAA---------GCT------GGAGCACAAAAG---AGCCTA------------------------------------ATGTGGAAC---TTAATTCTATTATCTACTGTAATGCTTGTTACTGGATATGTTGGTGAA---------GCT------------------GGC------TTAGGT---------------------------------------------------------------------------------------------------GATGCT------------------GTTGTTTGG---GGTACTATATCTGGTATTTCATATTTTGTAATTGTTTACATTTTA---------------TGG------TTT---GGTAGTGCTGGACAACTAGCTCAAAAG------GCA---GGAGGTGCT---GTT---CTT---GAT---GCT---TTT---AAT---GCTCTT---AAATGGTTCGTACTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILQK---A--GAQK-SL------------MWN-LILLSTVMLVTGYVGE---A------G--LG---------------------------------DA------VVW-GTISGISYFVIVYIL-----W--F-GSAGQLAQK--A-GGA-V-L-D-A-F-N-AL-KWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_KJ929290 [II-CFB-b] PRGD_OTU099_otuREP_17b4d51d626198812ffff361d00c53a4 gb|KJ929290| PRGD_OTU099_otuREP_17b4d51d626198812ffff361d00c53a4, putative proteorhodopsin gene, partial cds. PRGD_OTU099_otuREP_17b4d51d626198812ffff361d00c53a4, putative proteorhodopsin gene, partial cds. KJ929290 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-35.05, 23.73; -14.48, 113.45) ATTCTAACTGTTCCATTAATGTGTGTAGAATTTTATTTAATTCTTCAAAAAGCTGGAGCACAGAAAAGCCTTATGTGGAACCTTATATTCCTTTCAACAATTATGCTTGTTACTGGATATGTAGGTGAATCTGGAATGGGTGACGCTGTAATTTGGGGTACCATTTCTGGTATATCTTACTTTGTGATAGTTTATATCCTATGGTTTGGTAGTGCCGGACAACTTGCTCAAAAAGCAGGTGGTGCAGTTCTAGATGCTTTTAATGCACTAAAGTGGTTTGTACTTGTA ILTVPLMCVEFYLILQKAGAQKSLMWNLIFLSTIMLVTGYVGESGMGDAVIWGTISGISYFVIVYILWFGSAGQLAQKAGGAVLDAFNALKWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTAACTGTTCCATTAATGTGTGTAGAATTTTATTTAATTCTTCAAAAA---------GCT------GGAGCACAGAAA---AGCCTT------------------------------------ATGTGGAAC---CTTATATTCCTTTCAACAATTATGCTTGTTACTGGATATGTAGGTGAA---------TCT------------------GGA------ATGGGT---------------------------------------------------------------------------------------------------GACGCT------------------GTAATTTGG---GGTACCATTTCTGGTATATCTTACTTTGTGATAGTTTATATCCTA---------------TGG------TTT---GGTAGTGCCGGACAACTTGCTCAAAAA------GCA---GGTGGTGCA---GTT---CTA---GAT---GCT---TTT---AAT---GCACTA---AAGTGGTTTGTACTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILQK---A--GAQK-SL------------MWN-LIFLSTIMLVTGYVGE---S------G--MG---------------------------------DA------VIW-GTISGISYFVIVYIL-----W--F-GSAGQLAQK--A-GGA-V-L-D-A-F-N-AL-KWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_KJ929293 [II-CFB-b] PRGD_OTU099_17959fb45e57212607f55daa048f0120 gb|KJ929293| PRGD_OTU099_17959fb45e57212607f55daa048f0120, putative proteorhodopsin gene, partial cds. PRGD_OTU099_17959fb45e57212607f55daa048f0120, putative proteorhodopsin gene, partial cds. KJ929293 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) ATTCTAACAGTTCCATTAATGTGTGTTGAATTTTATTTAATACTACAAAAAGCGGGAGCACAGAAAAGTTTAATGTGGCAATTGATATTACTGTCAACTATTATGCTTGTTACAGGATATGTCGGTGAAGCAGGACTTGGTGATGCTGTAGTTTGGGGAACAATCTCAGGTATTTCTTACTTTGTTATTGTTTACATCTTATGGTTTGGTACTGCAGGTCAACTTGCTCAAAAAGCAGGTGGTGCTGTGCTAGACGCATTCAATGCTCTTAAGTGGTTTGTACTAGTA ILTVPLMCVEFYLILQKAGAQKSLMWQLILLSTIMLVTGYVGEAGLGDAVVWGTISGISYFVIVYILWFGTAGQLAQKAGGAVLDAFNALKWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTAACAGTTCCATTAATGTGTGTTGAATTTTATTTAATACTACAAAAA---------GCG------GGAGCACAGAAA---AGTTTA------------------------------------ATGTGGCAA---TTGATATTACTGTCAACTATTATGCTTGTTACAGGATATGTCGGTGAA---------GCA------------------GGA------CTTGGT---------------------------------------------------------------------------------------------------GATGCT------------------GTAGTTTGG---GGAACAATCTCAGGTATTTCTTACTTTGTTATTGTTTACATCTTA---------------TGG------TTT---GGTACTGCAGGTCAACTTGCTCAAAAA------GCA---GGTGGTGCT---GTG---CTA---GAC---GCA---TTC---AAT---GCTCTT---AAGTGGTTTGTACTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILQK---A--GAQK-SL------------MWQ-LILLSTIMLVTGYVGE---A------G--LG---------------------------------DA------VVW-GTISGISYFVIVYIL-----W--F-GTAGQLAQK--A-GGA-V-L-D-A-F-N-AL-KWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_KJ929295 [II-CFB-b] PRGD_OTU099_751a84967844537c067b42026622aa4d gb|KJ929295| PRGD_OTU099_751a84967844537c067b42026622aa4d, putative proteorhodopsin gene, partial cds. PRGD_OTU099_751a84967844537c067b42026622aa4d, putative proteorhodopsin gene, partial cds. KJ929295 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-14.48, 113.45) ATTCTAACAGTTCCATTAATGTGTGTTGAATTTTATTTAATACTACAAAAAGCGGGAGCACAGAAAAGTTTAATGTGGCAATTGATATTACTGTCAACTATTATGCTTGTTACAGGATATGTCGGTGAAGCAGGACTTGGTGATGCTGTAGTTTGGGGAACAATCTCAGGTATTTCATACTTTGTTATTGTTTACATCTTATGGTTTGGTACTGCAGGTCAACTTGCTCAAAAAGCAGGTGGTGCTGTTCTAGACGCATTCAATGCTCTTAAGTGGTTTGTACTTGTA ILTVPLMCVEFYLILQKAGAQKSLMWQLILLSTIMLVTGYVGEAGLGDAVVWGTISGISYFVIVYILWFGTAGQLAQKAGGAVLDAFNALKWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTAACAGTTCCATTAATGTGTGTTGAATTTTATTTAATACTACAAAAA---------GCG------GGAGCACAGAAA---AGTTTA------------------------------------ATGTGGCAA---TTGATATTACTGTCAACTATTATGCTTGTTACAGGATATGTCGGTGAA---------GCA------------------GGA------CTTGGT---------------------------------------------------------------------------------------------------GATGCT------------------GTAGTTTGG---GGAACAATCTCAGGTATTTCATACTTTGTTATTGTTTACATCTTA---------------TGG------TTT---GGTACTGCAGGTCAACTTGCTCAAAAA------GCA---GGTGGTGCT---GTT---CTA---GAC---GCA---TTC---AAT---GCTCTT---AAGTGGTTTGTACTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILQK---A--GAQK-SL------------MWQ-LILLSTIMLVTGYVGE---A------G--LG---------------------------------DA------VVW-GTISGISYFVIVYIL-----W--F-GTAGQLAQK--A-GGA-V-L-D-A-F-N-AL-KWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_KJ929294 [II-CFB-b] PRGD_OTU099_1c98d2b5cf57edbe4672426ea22a22c8 gb|KJ929294| PRGD_OTU099_1c98d2b5cf57edbe4672426ea22a22c8, putative proteorhodopsin gene, partial cds. PRGD_OTU099_1c98d2b5cf57edbe4672426ea22a22c8, putative proteorhodopsin gene, partial cds. KJ929294 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), Indian Ocean (-35.05, 23.73; -14.48, 113.45) ATTTTAACAGTTCCATTAATGTGTGTTGAATTTTATTTAATACTACAAAAAGCGGGAGCACAAAAAAGTTTAATGTGGAACATGATATTACTGTCAACAATTATGCTTGTAACAGGATATATCGGTGAAGCAGGACTTGGTGATGCTGTAATTTGGGGAACAATCTCAGGTATTTCATACTTTGTTATTGTTTACATCTTATGGTTCGGTAGTGCAGGTCAACTTGCTCAAAAAGCAGGTGGTGCTGTGCTAGACGCATTCAATGCTCTTAAGTGGTTTGTACTAGTA ILTVPLMCVEFYLILQKAGAQKSLMWNMILLSTIMLVTGYIGEAGLGDAVIWGTISGISYFVIVYILWFGSAGQLAQKAGGAVLDAFNALKWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACAGTTCCATTAATGTGTGTTGAATTTTATTTAATACTACAAAAA---------GCG------GGAGCACAAAAA---AGTTTA------------------------------------ATGTGGAAC---ATGATATTACTGTCAACAATTATGCTTGTAACAGGATATATCGGTGAA---------GCA------------------GGA------CTTGGT---------------------------------------------------------------------------------------------------GATGCT------------------GTAATTTGG---GGAACAATCTCAGGTATTTCATACTTTGTTATTGTTTACATCTTA---------------TGG------TTC---GGTAGTGCAGGTCAACTTGCTCAAAAA------GCA---GGTGGTGCT---GTG---CTA---GAC---GCA---TTC---AAT---GCTCTT---AAGTGGTTTGTACTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILQK---A--GAQK-SL------------MWN-MILLSTIMLVTGYIGE---A------G--LG---------------------------------DA------VIW-GTISGISYFVIVYIL-----W--F-GSAGQLAQK--A-GGA-V-L-D-A-F-N-AL-KWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-b]_KJ929849 [II-CFB-b] PRGD_OTU300_otuREP_272fd0b108123c1cc5765ba85ce15a48 gb|KJ929849| PRGD_OTU300_otuREP_272fd0b108123c1cc5765ba85ce15a48, putative proteorhodopsin gene, partial cds. PRGD_OTU300_otuREP_272fd0b108123c1cc5765ba85ce15a48, putative proteorhodopsin gene, partial cds. KJ929849 [[proteorhodopsin super-cluster II/CFB-like cluster/B subcluster]] proteorhodopsin super-cluster II CFB-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-23.5956, 69.0419) ATACTAACTGTACCACTAATGTGTGTAGAGTTTTATTTGATTCTTGCAAAAGCTGGAGCTAAAAAAGGTCTTATGTGGAAACTAATTTTCTGGTCAACTGTTATGTTGGTATTCGGATATGTTGGTGAAGCTGTAGATCGCGACAACGCATGGTTATGGGGATTAATCTCTGGTGCAGCGTATTTCTATGTTGCATACATGATTTGGCTCGGCGAAGCTAAAGCATTAGCTGAAAAAGCTGGTGGCGCTGTATTAGAAGCACACAATGCTTTATGTTGGTTCGTATTAGTT ILTVPLMCVEFYLILAKAGAKKGLMWKLIFWSTVMLVFGYVGEAVDRDNAWLWGLISGAAYFYVAYMIWLGEAKALAEKAGGAVLEAHNALCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTAACTGTACCACTAATGTGTGTAGAGTTTTATTTGATTCTTGCAAAA---------GCT------GGAGCTAAAAAA---GGTCTT------------------------------------ATGTGGAAA---CTAATTTTCTGGTCAACTGTTATGTTGGTATTCGGATATGTTGGTGAA---------GCT------------------GTA------GATCGC------------------------------------------------------------------------------------------------GACAACGCA------------------TGGTTATGG---GGATTAATCTCTGGTGCAGCGTATTTCTATGTTGCATACATGATT---------------TGG------CTC---GGCGAAGCTAAAGCATTAGCTGAAAAA------GCT---GGTGGCGCT---GTA---TTA---GAA---GCA---CAC---AAT---GCTTTA---TGTTGGTTCGTATTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILAK---A--GAKK-GL------------MWK-LIFWSTVMLVFGYVGE---A------V--DR--------------------------------DNA------WLW-GLISGAAYFYVAYMI-----W--L-GEAKALAEK--A-GGA-V-L-E-A-H-N-AL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-ARCTIC22G04]_KJ929131 [II-CFB-ARCTIC22G04] PRGD_OTU078b_aff07f990060977de131fa0d2afc2bf9 gb|KJ929131| PRGD_OTU078b_aff07f990060977de131fa0d2afc2bf9, putative proteorhodopsin gene, partial cds. PRGD_OTU078b_aff07f990060977de131fa0d2afc2bf9, putative proteorhodopsin gene, partial cds. KJ929131 [[proteorhodopsin super-cluster II/CFB-like cluster/ARCTIC22G04-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster ARCTIC22G04-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; ; 67.49, -168.12) ATTTTAACTGTGCCATTAATGTGTGTTGAGTTTTATTTAATACTAAAGGTAGCAGGCGCAAAAAAATCAATGATGTGGAGACTAATCTTCTTATCAACTATTATGCTAGTAACAGGATATTTTGGAGAAGCAGTATATACTGATAGTGCAGCTATGTGGGGATTCATCTCTGGTGCAGCATACTTTGTTATTGTTTACGATATTTGGTTTGGATCTGCAAAGAAATTAGCTATAGAAGCTGGTGGTGCAGTCCTAAAAGCACACAAAACATTGTGTTGGTTTGTCCTAGTA ILTVPLMCVEFYLILKVAGAKKSMMWRLIFLSTIMLVTGYFGEAVYTDSAAMWGFISGAAYFVIVYDIWFGSAKKLAIEAGGAVLKAHKTLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACTGTGCCATTAATGTGTGTTGAGTTTTATTTAATACTAAAGGTA---------GCA------GGCGCAAAAAAA---TCAATG------------------------------------ATGTGGAGA---CTAATCTTCTTATCAACTATTATGCTAGTAACAGGATATTTTGGAGAA---------GCA------------------GTA------TATACT------------------------------------------------------------------------------------------------GATAGTGCA------------------GCTATGTGG---GGATTCATCTCTGGTGCAGCATACTTTGTTATTGTTTACGATATT---------------TGG------TTT---GGATCTGCAAAGAAATTAGCTATAGAA------GCT---GGTGGTGCA---GTC---CTA---AAA---GCA---CAC---AAA---ACATTG---TGTTGGTTTGTCCTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GAKK-SM------------MWR-LIFLSTIMLVTGYFGE---A------V--YT--------------------------------DSA------AMW-GFISGAAYFVIVYDI-----W--F-GSAKKLAIE--A-GGA-V-L-K-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-ARCTIC22G04]_KJ929132 [II-CFB-ARCTIC22G04] PRGD_OTU078b_b779c8144f49313274085fe054fb47ac gb|KJ929132| PRGD_OTU078b_b779c8144f49313274085fe054fb47ac, putative proteorhodopsin gene, partial cds. PRGD_OTU078b_b779c8144f49313274085fe054fb47ac, putative proteorhodopsin gene, partial cds. KJ929132 [[proteorhodopsin super-cluster II/CFB-like cluster/ARCTIC22G04-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster ARCTIC22G04-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Bering strait marine 67.49 -168.12 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (33.935, 18.508) ATTTTAACTGTGCCATTAATGTGTGTTGAGTTTTATTTAATTTTAAAAGTTGCAGGCGCAAAAAAATCAATGATGTGGAGACTAATCTTCTTATCAACTATTATGCTAGTAACAGGATATTTTGGAGAAGCAGTATATACTGATAGTGCAGCTATGTGGGGATTCATCTCTGGTGCAGCATACTTTGTTATTGTTTACGATATTTGGTTTGGATCTGCAAAGAAATTAGCTATAGAAGCTGGTGGTGCAGTCCTAAAAGCACACAAAACATTGTGTTGGTTTGTTCTAGTA ILTVPLMCVEFYLILKVAGAKKSMMWRLIFLSTIMLVTGYFGEAVYTDSAAMWGFISGAAYFVIVYDIWFGSAKKLAIEAGGAVLKAHKTLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACTGTGCCATTAATGTGTGTTGAGTTTTATTTAATTTTAAAAGTT---------GCA------GGCGCAAAAAAA---TCAATG------------------------------------ATGTGGAGA---CTAATCTTCTTATCAACTATTATGCTAGTAACAGGATATTTTGGAGAA---------GCA------------------GTA------TATACT------------------------------------------------------------------------------------------------GATAGTGCA------------------GCTATGTGG---GGATTCATCTCTGGTGCAGCATACTTTGTTATTGTTTACGATATT---------------TGG------TTT---GGATCTGCAAAGAAATTAGCTATAGAA------GCT---GGTGGTGCA---GTC---CTA---AAA---GCA---CAC---AAA---ACATTG---TGTTGGTTTGTTCTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GAKK-SM------------MWR-LIFLSTIMLVTGYFGE---A------V--YT--------------------------------DSA------AMW-GFISGAAYFVIVYDI-----W--F-GSAKKLAIE--A-GGA-V-L-K-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-ARCTIC22G04]_KJ929133 [II-CFB-ARCTIC22G04] PRGD_OTU078b_cc04d518b49a7007a4a5bda3cb8af36f gb|KJ929133| PRGD_OTU078b_cc04d518b49a7007a4a5bda3cb8af36f, putative proteorhodopsin gene, partial cds. PRGD_OTU078b_cc04d518b49a7007a4a5bda3cb8af36f, putative proteorhodopsin gene, partial cds. KJ929133 [[proteorhodopsin super-cluster II/CFB-like cluster/ARCTIC22G04-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster ARCTIC22G04-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) ATTTTAACTGTGCCATTAATGTGTGTTGAATTTTATTTAATACTAAAGGTAGCAGGCGCAAAAAAATCAATGATGTGGAGACTAATCTTCTTATCAACTATTATGCTAGTAACAGGATATTTTGGAGAAGCAGTATATACTGATAGTGCAGCTATGTGGGGATTCATCTCTGGTGTAGCATACTTTGTTATTGTTTACGATATTTGGTTAGGATCTGCAAAGAAATTAGCTGTAGAAGCTGGTGGTGCAGTCTTAAAAGCACACAAAACTTTGTGTTGGTTTGTTTTAGTA ILTVPLMCVEFYLILKVAGAKKSMMWRLIFLSTIMLVTGYFGEAVYTDSAAMWGFISGVAYFVIVYDIWLGSAKKLAVEAGGAVLKAHKTLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACTGTGCCATTAATGTGTGTTGAATTTTATTTAATACTAAAGGTA---------GCA------GGCGCAAAAAAA---TCAATG------------------------------------ATGTGGAGA---CTAATCTTCTTATCAACTATTATGCTAGTAACAGGATATTTTGGAGAA---------GCA------------------GTA------TATACT------------------------------------------------------------------------------------------------GATAGTGCA------------------GCTATGTGG---GGATTCATCTCTGGTGTAGCATACTTTGTTATTGTTTACGATATT---------------TGG------TTA---GGATCTGCAAAGAAATTAGCTGTAGAA------GCT---GGTGGTGCA---GTC---TTA---AAA---GCA---CAC---AAA---ACTTTG---TGTTGGTTTGTTTTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GAKK-SM------------MWR-LIFLSTIMLVTGYFGE---A------V--YT--------------------------------DSA------AMW-GFISGVAYFVIVYDI-----W--L-GSAKKLAVE--A-GGA-V-L-K-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-ARCTIC22G04]_KJ929127 [II-CFB-ARCTIC22G04] PRGD_OTU078b_otuREP_3484bec38a4265a1bf917f9aa0da6053 gb|KJ929127| PRGD_OTU078b_otuREP_3484bec38a4265a1bf917f9aa0da6053, putative proteorhodopsin gene, partial cds. PRGD_OTU078b_otuREP_3484bec38a4265a1bf917f9aa0da6053, putative proteorhodopsin gene, partial cds. KJ929127 [[proteorhodopsin super-cluster II/CFB-like cluster/ARCTIC22G04-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster ARCTIC22G04-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Bering strait marine 67.49 -168.12 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) ATTTTAACTGTGCCATTAATGTGTGTTGAATTTTATTTAATACTAAAGGTAGCAGGAGCAAAAAAATCAATGATGTGGAGACTAATCTTCTTATCAACTATTATGTTAGTAACAGGATATTTTGGAGAAGCAGTATATACTGATAGTGCAGCTATGTGGGGATTCATCTCTGGAGCAGCATACTTTGTTATTGTTTACGATATTTGGTTAGGATCTGCAAAGAAATTAGCTGTAGAAGCTGGTGGTGCAGTCTTAAAAGCACACAAAACTTTGTGTTGGTTTGTTTTAGTA ILTVPLMCVEFYLILKVAGAKKSMMWRLIFLSTIMLVTGYFGEAVYTDSAAMWGFISGAAYFVIVYDIWLGSAKKLAVEAGGAVLKAHKTLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACTGTGCCATTAATGTGTGTTGAATTTTATTTAATACTAAAGGTA---------GCA------GGAGCAAAAAAA---TCAATG------------------------------------ATGTGGAGA---CTAATCTTCTTATCAACTATTATGTTAGTAACAGGATATTTTGGAGAA---------GCA------------------GTA------TATACT------------------------------------------------------------------------------------------------GATAGTGCA------------------GCTATGTGG---GGATTCATCTCTGGAGCAGCATACTTTGTTATTGTTTACGATATT---------------TGG------TTA---GGATCTGCAAAGAAATTAGCTGTAGAA------GCT---GGTGGTGCA---GTC---TTA---AAA---GCA---CAC---AAA---ACTTTG---TGTTGGTTTGTTTTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GAKK-SM------------MWR-LIFLSTIMLVTGYFGE---A------V--YT--------------------------------DSA------AMW-GFISGAAYFVIVYDI-----W--L-GSAKKLAVE--A-GGA-V-L-K-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-ARCTIC22G04]_KJ929129 [II-CFB-ARCTIC22G04] PRGD_OTU078b_8f3bc02b2521561079491260d09e3fc1 gb|KJ929129| PRGD_OTU078b_8f3bc02b2521561079491260d09e3fc1, putative proteorhodopsin gene, partial cds. PRGD_OTU078b_8f3bc02b2521561079491260d09e3fc1, putative proteorhodopsin gene, partial cds. KJ929129 [[proteorhodopsin super-cluster II/CFB-like cluster/ARCTIC22G04-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster ARCTIC22G04-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; ; 67.49, -168.12), Indian Ocean (-14.48, 113.45; -33.28, 45.35) ATTTTAACTGTGCCATTAATGTGTGTTGAGTTTTACTTGATATTAAAAGTTGCAGGCGCAAAAAAATCTATGATGTGGAGATTGATCTTCTTATCAACTATTATGCTAGTAACAGGATATTTTGGAGAAGCAGTATATACTGATAGTGCAGCTATGTGGGGATTCATCTCTGGAGCAGCATACTTTGTTATTGTTTACGATATTTGGTTAGGATCTGCAAAGAAATTAGCTGTTGCAGCTGGTGGTGCAGTATTAAAAGCACACAAAACTTTATGTTGGTTTGTTCTAGTA ILTVPLMCVEFYLILKVAGAKKSMMWRLIFLSTIMLVTGYFGEAVYTDSAAMWGFISGAAYFVIVYDIWLGSAKKLAVAAGGAVLKAHKTLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACTGTGCCATTAATGTGTGTTGAGTTTTACTTGATATTAAAAGTT---------GCA------GGCGCAAAAAAA---TCTATG------------------------------------ATGTGGAGA---TTGATCTTCTTATCAACTATTATGCTAGTAACAGGATATTTTGGAGAA---------GCA------------------GTA------TATACT------------------------------------------------------------------------------------------------GATAGTGCA------------------GCTATGTGG---GGATTCATCTCTGGAGCAGCATACTTTGTTATTGTTTACGATATT---------------TGG------TTA---GGATCTGCAAAGAAATTAGCTGTTGCA------GCT---GGTGGTGCA---GTA---TTA---AAA---GCA---CAC---AAA---ACTTTA---TGTTGGTTTGTTCTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GAKK-SM------------MWR-LIFLSTIMLVTGYFGE---A------V--YT--------------------------------DSA------AMW-GFISGAAYFVIVYDI-----W--L-GSAKKLAVA--A-GGA-V-L-K-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-ARCTIC22G04]_KJ929128 [II-CFB-ARCTIC22G04] PRGD_OTU078b_401ee9edcc9185d125f555e05b18d686 gb|KJ929128| PRGD_OTU078b_401ee9edcc9185d125f555e05b18d686, putative proteorhodopsin gene, partial cds. PRGD_OTU078b_401ee9edcc9185d125f555e05b18d686, putative proteorhodopsin gene, partial cds. KJ929128 [[proteorhodopsin super-cluster II/CFB-like cluster/ARCTIC22G04-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster ARCTIC22G04-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Bering strait marine 67.49 -168.12 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45; -33.28, 45.35) ATTTTAACTGTGCCATTAATGTGTGTTGAATTTTATTTAATACTAAAGGTTGCAGGCGCAAAAAAATCTATGATGTGGAGATTGATCTTCTTATCAACTATTATGCTAGTAACAGGATATTTTGGAGAAGCAGTATACACTGATAGTGCAGCTATGTGGGGATTCATCTCTGGAGCAGCATACTTTGTTATTGTTTATGATATTTGGTTAGGATCTGCAAAGAAATTAGCTGTAGAAGCTGGTGGTGCAGTATTAAAAGCACACAAAACTTTGTGTTGGTTTGTTCTAGTA ILTVPLMCVEFYLILKVAGAKKSMMWRLIFLSTIMLVTGYFGEAVYTDSAAMWGFISGAAYFVIVYDIWLGSAKKLAVEAGGAVLKAHKTLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACTGTGCCATTAATGTGTGTTGAATTTTATTTAATACTAAAGGTT---------GCA------GGCGCAAAAAAA---TCTATG------------------------------------ATGTGGAGA---TTGATCTTCTTATCAACTATTATGCTAGTAACAGGATATTTTGGAGAA---------GCA------------------GTA------TACACT------------------------------------------------------------------------------------------------GATAGTGCA------------------GCTATGTGG---GGATTCATCTCTGGAGCAGCATACTTTGTTATTGTTTATGATATT---------------TGG------TTA---GGATCTGCAAAGAAATTAGCTGTAGAA------GCT---GGTGGTGCA---GTA---TTA---AAA---GCA---CAC---AAA---ACTTTG---TGTTGGTTTGTTCTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GAKK-SM------------MWR-LIFLSTIMLVTGYFGE---A------V--YT--------------------------------DSA------AMW-GFISGAAYFVIVYDI-----W--L-GSAKKLAVE--A-GGA-V-L-K-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-ARCTIC22G04]_KJ929130 [II-CFB-ARCTIC22G04] PRGD_OTU078b_a879768e9a3d44f0a41aec98801470eb gb|KJ929130| PRGD_OTU078b_a879768e9a3d44f0a41aec98801470eb, putative proteorhodopsin gene, partial cds. PRGD_OTU078b_a879768e9a3d44f0a41aec98801470eb, putative proteorhodopsin gene, partial cds. KJ929130 [[proteorhodopsin super-cluster II/CFB-like cluster/ARCTIC22G04-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster ARCTIC22G04-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) ATCTTAACTGTGCCATTAATGTGCGTTGAATTTTATTTAATACTAAAGGTAGCAGGAGCAAAAAAATCAATGATGTGGCGATTAATCTTGTTATCAACAATTATGTTAGTAACAGGATACTTTGGAGAAGCAGTATATACTGACAATGCCGCTTTTTGGGGATTTGTCTCTGGAGCAGCATATTTTGTTATCGTTTACGATATTTGGTTAGGATCTGCAAAGAAATTAGCAGTAGAAGCTGGTGGTGCTGTATTAAGCGCTCACAAGACTTTATGTTGGTTCGTACTTGTA ILTVPLMCVEFYLILKVAGAKKSMMWRLILLSTIMLVTGYFGEAVYTDNAAFWGFVSGAAYFVIVYDIWLGSAKKLAVEAGGAVLSAHKTLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAACTGTGCCATTAATGTGCGTTGAATTTTATTTAATACTAAAGGTA---------GCA------GGAGCAAAAAAA---TCAATG------------------------------------ATGTGGCGA---TTAATCTTGTTATCAACAATTATGTTAGTAACAGGATACTTTGGAGAA---------GCA------------------GTA------TATACT------------------------------------------------------------------------------------------------GACAATGCC------------------GCTTTTTGG---GGATTTGTCTCTGGAGCAGCATATTTTGTTATCGTTTACGATATT---------------TGG------TTA---GGATCTGCAAAGAAATTAGCAGTAGAA------GCT---GGTGGTGCT---GTA---TTA---AGC---GCT---CAC---AAG---ACTTTA---TGTTGGTTCGTACTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GAKK-SM------------MWR-LILLSTIMLVTGYFGE---A------V--YT--------------------------------DNA------AFW-GFVSGAAYFVIVYDI-----W--L-GSAKKLAVE--A-GGA-V-L-S-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Cyclobacteriaceae]_KJ929914 [II-CFB-Cyclobacteriaceae] PRGD_OTU365_otuREP_d6aea0776591045868cdd3b49267c9fd gb|KJ929914| PRGD_OTU365_otuREP_d6aea0776591045868cdd3b49267c9fd, putative proteorhodopsin gene, partial cds. PRGD_OTU365_otuREP_d6aea0776591045868cdd3b49267c9fd, putative proteorhodopsin gene, partial cds. KJ929914 [[proteorhodopsin super-cluster II/CFB-like cluster/Cyclobacteriaceae-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Cyclobacteriaceae-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Bering strait marine 67.49 -168.12 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (67.49, -168.12), Indian Ocean (-14.48, 113.45) ATCTTGACCGTGCCATTGATGTGTGTAGAATTTTTCCTCATTCTACGCGCTGTCGGAGCGAAGCAGAGCTTGCTCTGGAAGATGATCGGTTACTCCCTGATTATGCTGGTTGCCGGTTACCTTGGTGAAACGGTTTACCGTGATCAGTCTGTCCTCTTTGGCTTCATTTCCACTATCGGTTACGCCGGTATTCTCTACGAAGCGTGGTTTGGTTCTGCTAAGAAGCTGGCCAATAACAGTAACGATCCGAGGTTGCAAGGTGCCATCAAAGCACTTGGTTGGTTCGTATTTGCT ILTVPLMCVEFFLILRAVGAKQSLLWKMIGYSLIMLVAGYLGETVYRDQSVLFGFISTIGYAGILYEAWFGSAKKLANNSNDPRLQGAIKALGWFVFA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTGACCGTGCCATTGATGTGTGTAGAATTTTTCCTCATTCTACGCGCT---------GTC------GGAGCGAAGCAG---AGCTTG------------------------------------CTCTGGAAG---ATGATCGGTTACTCCCTGATTATGCTGGTTGCCGGTTACCTTGGTGAA---------ACG------------------GTT------TACCGT------------------------------------------------------------------------------------------------GATCAGTCT------------------GTCCTCTTT---GGCTTCATTTCCACTATCGGTTACGCCGGTATTCTCTACGAAGCG---------------TGG------TTT---GGTTCTGCTAAGAAGCTGGCCAATAAC------AGT---AACGATCCGAGGTTG---CAA---GGT---GCC---ATC---AAA---GCACTT---GGTTGGTTCGTATTTGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFFLILRA---V--GAKQ-SL------------LWK-MIGYSLIMLVAGYLGE---T------V--YR--------------------------------DQS------VLF-GFISTIGYAGILYEA-----W--F-GSAKKLANN--S-NDPRL-Q-G-A-I-K-AL-GWFVFA-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Cyclobacteriaceae]_KJ929811 [II-CFB-Cyclobacteriaceae] PRGD_OTU262_otuREP_a046fcda67586245c6634618c16e8e43 gb|KJ929811| PRGD_OTU262_otuREP_a046fcda67586245c6634618c16e8e43, putative proteorhodopsin gene, partial cds. PRGD_OTU262_otuREP_a046fcda67586245c6634618c16e8e43, putative proteorhodopsin gene, partial cds. KJ929811 [[proteorhodopsin super-cluster II/CFB-like cluster/Cyclobacteriaceae-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Cyclobacteriaceae-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTTTAACTGTACCATTAATGTGCGTTGAGTTCTATTTGATCTTAAAGGCATTTGGTGCTACTGTATCATTGTTATGGAAAATGATTGCCTATTCACTATTAATGTTAATTGCTGGTTATTTAGGTGAAACTGTTTACCGTGATCAGTCAGTAATGTGGGGTTTCATCTCAACTATCGGATACGTAGGTATTCTTTATGAGGTATGGTTGGGATCAGCTAAAAAATTGGCTGGTAACTCAAATGACCCAGCACTACAAGGTGCATTCAAAACATTAGGTTGGTTCGTATTAGTT ILTVPLMCVEFYLILKAFGATVSLLWKMIAYSLLMLIAGYLGETVYRDQSVMWGFISTIGYVGILYEVWLGSAKKLAGNSNDPALQGAFKTLGWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACTGTACCATTAATGTGCGTTGAGTTCTATTTGATCTTAAAGGCA---------TTT------GGTGCTACTGTA---TCATTG------------------------------------TTATGGAAA---ATGATTGCCTATTCACTATTAATGTTAATTGCTGGTTATTTAGGTGAA---------ACT------------------GTT------TACCGT------------------------------------------------------------------------------------------------GATCAGTCA------------------GTAATGTGG---GGTTTCATCTCAACTATCGGATACGTAGGTATTCTTTATGAGGTA---------------TGG------TTG---GGATCAGCTAAAAAATTGGCTGGTAAC------TCA---AATGACCCAGCACTA---CAA---GGT---GCA---TTC---AAA---ACATTA---GGTTGGTTCGTATTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---F--GATV-SL------------LWK-MIAYSLLMLIAGYLGE---T------V--YR--------------------------------DQS------VMW-GFISTIGYVGILYEV-----W--L-GSAKKLAGN--S-NDPAL-Q-G-A-F-K-TL-GWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Cyclobacteriaceae]_KJ929225 [II-CFB-Cyclobacteriaceae] PRGD_OTU090_1f9b7e68b2a0ebebd356329fc6cc6400 gb|KJ929225| PRGD_OTU090_1f9b7e68b2a0ebebd356329fc6cc6400, putative proteorhodopsin gene, partial cds. PRGD_OTU090_1f9b7e68b2a0ebebd356329fc6cc6400, putative proteorhodopsin gene, partial cds. KJ929225 [[proteorhodopsin super-cluster II/CFB-like cluster/Cyclobacteriaceae-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Cyclobacteriaceae-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175) ATTCTTACAGTACCTCTGATGTGCGTGGAGTTCTATCTGCTAACTAAGCCATTCGGTGCGAAAGGCGGGACCTTGTTCAAGTTGATCGTCGCATCAATCGTGATGCTTGTATTTGGATATATCGGTGAAATCAGCGGCCCAGGTCAGACAATGATGTGGGGAACCATTTCAACGATTGGCTATCTTTACATTGTATACGAAGTATTCGCTGGTGATGTAGCTAAGCTCACCAAAACCTCAGATAGCGAGTCTCTCAAGTCTGCGATGTTCTTGATGAAGATATTCATTACTGGT ILTVPLMCVEFYLLTKPFGAKGGTLFKLIVASIVMLVFGYIGEISGPGQTMMWGTISTIGYLYIVYEVFAGDVAKLTKTSDSESLKSAMFLMKIFITG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTACAGTACCTCTGATGTGCGTGGAGTTCTATCTGCTAACTAAGCCA---------TTC------GGTGCGAAAGGC---GGGACC------------------------------------TTGTTCAAG---TTGATCGTCGCATCAATCGTGATGCTTGTATTTGGATATATCGGTGAA---------ATC------------------AGC------GGCCCA------------------------------------------------------------------------------------------------GGTCAGACA------------------ATGATGTGG---GGAACCATTTCAACGATTGGCTATCTTTACATTGTATACGAAGTA---------------TTC------GCT---GGTGATGTAGCTAAGCTCACCAAAACC------TCA---GATAGCGAGTCTCTC---AAG---TCT---GCG---ATG---TTC---TTGATG---AAGATATTCATTACTGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLTKP---F--GAKG-GT------------LFK-LIVASIVMLVFGYIGE---I------S--GP--------------------------------GQT------MMW-GTISTIGYLYIVYEV-----F--A-GDVAKLTKT--S-DSESL-K-S-A-M-F-LM-KIFITG-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Cyclobacteriaceae]_KJ929231 [II-CFB-Cyclobacteriaceae] PRGD_OTU090_cdd96ad17fe0a5931dd1141f19c39ba6 gb|KJ929231| PRGD_OTU090_cdd96ad17fe0a5931dd1141f19c39ba6, putative proteorhodopsin gene, partial cds. PRGD_OTU090_cdd96ad17fe0a5931dd1141f19c39ba6, putative proteorhodopsin gene, partial cds. KJ929231 [[proteorhodopsin super-cluster II/CFB-like cluster/Cyclobacteriaceae-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Cyclobacteriaceae-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTCTTACAGTACCTCTGATGTGCGTGGAGTTCTATCTGCTAACTAAGCCATTCGGAGCAAAGGGCGGGACATTGTTCAAGTTGATCGTCGCATCAATCGTCATGCTTGTGTTTGGATACATTGGCGAAATCAGCGGCCCAGGTCAAACAATGATGTGGGGAACCGTTTCAACGATTGGCTACCTTTACATTGTATACGAAGTATTCGCTGGTGATGTAGCTAAGCTCACCAAAACCTCAGACAGCGAGTCTCTCAAGTCTGCGATGTTCTTGATGAAGATCTTCATTACTGGT ILTVPLMCVEFYLLTKPFGAKGGTLFKLIVASIVMLVFGYIGEISGPGQTMMWGTVSTIGYLYIVYEVFAGDVAKLTKTSDSESLKSAMFLMKIFITG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTACAGTACCTCTGATGTGCGTGGAGTTCTATCTGCTAACTAAGCCA---------TTC------GGAGCAAAGGGC---GGGACA------------------------------------TTGTTCAAG---TTGATCGTCGCATCAATCGTCATGCTTGTGTTTGGATACATTGGCGAA---------ATC------------------AGC------GGCCCA------------------------------------------------------------------------------------------------GGTCAAACA------------------ATGATGTGG---GGAACCGTTTCAACGATTGGCTACCTTTACATTGTATACGAAGTA---------------TTC------GCT---GGTGATGTAGCTAAGCTCACCAAAACC------TCA---GACAGCGAGTCTCTC---AAG---TCT---GCG---ATG---TTC---TTGATG---AAGATCTTCATTACTGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLTKP---F--GAKG-GT------------LFK-LIVASIVMLVFGYIGE---I------S--GP--------------------------------GQT------MMW-GTVSTIGYLYIVYEV-----F--A-GDVAKLTKT--S-DSESL-K-S-A-M-F-LM-KIFITG-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Cyclobacteriaceae]_KJ929227 [II-CFB-Cyclobacteriaceae] PRGD_OTU090_92223bcfd9d327bbadfe35d6dfa5c8c2 gb|KJ929227| PRGD_OTU090_92223bcfd9d327bbadfe35d6dfa5c8c2, putative proteorhodopsin gene, partial cds. PRGD_OTU090_92223bcfd9d327bbadfe35d6dfa5c8c2, putative proteorhodopsin gene, partial cds. KJ929227 [[proteorhodopsin super-cluster II/CFB-like cluster/Cyclobacteriaceae-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Cyclobacteriaceae-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683) ATTCTAACAGTGCCTCTGATGTGCGTAGAGTTCTATCTGCTGACCAAGCCGTTTGGTGCTAAAGGTGGTACTTTGTTCAAGCTGATCGTTGCTTCCATCGTTATGCTTGTGTTTGGTTACATCGGTGAAATCAGTGGTCCAGCGCAGACAATGATGTGGGGTACAATCTCAACAATCGGCTATCTATACATTGTGTATGAAGTATTCGCTGGTGATGTAGCGAAGCTCACAAAGACCTCCGACAGCGAAGCTCTCAAGTCTGCTATGTTCTTGATGAAGATCTTCATTACTGGT ILTVPLMCVEFYLLTKPFGAKGGTLFKLIVASIVMLVFGYIGEISGPAQTMMWGTISTIGYLYIVYEVFAGDVAKLTKTSDSEALKSAMFLMKIFITG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTAACAGTGCCTCTGATGTGCGTAGAGTTCTATCTGCTGACCAAGCCG---------TTT------GGTGCTAAAGGT---GGTACT------------------------------------TTGTTCAAG---CTGATCGTTGCTTCCATCGTTATGCTTGTGTTTGGTTACATCGGTGAA---------ATC------------------AGT------GGTCCA------------------------------------------------------------------------------------------------GCGCAGACA------------------ATGATGTGG---GGTACAATCTCAACAATCGGCTATCTATACATTGTGTATGAAGTA---------------TTC------GCT---GGTGATGTAGCGAAGCTCACAAAGACC------TCC---GACAGCGAAGCTCTC---AAG---TCT---GCT---ATG---TTC---TTGATG---AAGATCTTCATTACTGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLTKP---F--GAKG-GT------------LFK-LIVASIVMLVFGYIGE---I------S--GP--------------------------------AQT------MMW-GTISTIGYLYIVYEV-----F--A-GDVAKLTKT--S-DSEAL-K-S-A-M-F-LM-KIFITG-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Cyclobacteriaceae]_KJ929230 [II-CFB-Cyclobacteriaceae] PRGD_OTU090_ccd9adb0fcf54794224e1148c6e85dae gb|KJ929230| PRGD_OTU090_ccd9adb0fcf54794224e1148c6e85dae, putative proteorhodopsin gene, partial cds. PRGD_OTU090_ccd9adb0fcf54794224e1148c6e85dae, putative proteorhodopsin gene, partial cds. KJ929230 [[proteorhodopsin super-cluster II/CFB-like cluster/Cyclobacteriaceae-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Cyclobacteriaceae-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) ATTCTAACAGTACCTCTGATGTGCGTAGAGTTCTATCTGTTGACCAAACCATTTGGTGCTAAGGGTGGTACATTGTTCAAGCTGATCATCGCATCCATCGTAATGCTCGTGTTTGGGTACATCGGTGAAATCAGTGGTCCAAGCACAACAATGATGTGGGGTACTGTTTCGACAATCGGCTACCTTTACATTGTGTATGAAGTTTTCGCTGGTGATGTAGCGAAGCTCACCAAAACATCTGACAGCGAAGCTCTCAAGTCAGCGATGTTCCTGATGAAGATCTTCATCACTGGT ILTVPLMCVEFYLLTKPFGAKGGTLFKLIIASIVMLVFGYIGEISGPSTTMMWGTVSTIGYLYIVYEVFAGDVAKLTKTSDSEALKSAMFLMKIFITG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTAACAGTACCTCTGATGTGCGTAGAGTTCTATCTGTTGACCAAACCA---------TTT------GGTGCTAAGGGT---GGTACA------------------------------------TTGTTCAAG---CTGATCATCGCATCCATCGTAATGCTCGTGTTTGGGTACATCGGTGAA---------ATC------------------AGT------GGTCCA------------------------------------------------------------------------------------------------AGCACAACA------------------ATGATGTGG---GGTACTGTTTCGACAATCGGCTACCTTTACATTGTGTATGAAGTT---------------TTC------GCT---GGTGATGTAGCGAAGCTCACCAAAACA------TCT---GACAGCGAAGCTCTC---AAG---TCA---GCG---ATG---TTC---CTGATG---AAGATCTTCATCACTGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLTKP---F--GAKG-GT------------LFK-LIIASIVMLVFGYIGE---I------S--GP--------------------------------STT------MMW-GTVSTIGYLYIVYEV-----F--A-GDVAKLTKT--S-DSEAL-K-S-A-M-F-LM-KIFITG-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Cyclobacteriaceae]_KJ929228 [II-CFB-Cyclobacteriaceae] PRGD_OTU090_b65e0c19e976d8dc262194e38f584c12 gb|KJ929228| PRGD_OTU090_b65e0c19e976d8dc262194e38f584c12, putative proteorhodopsin gene, partial cds. PRGD_OTU090_b65e0c19e976d8dc262194e38f584c12, putative proteorhodopsin gene, partial cds. KJ929228 [[proteorhodopsin super-cluster II/CFB-like cluster/Cyclobacteriaceae-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Cyclobacteriaceae-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTTTGACCGTACCTCTCATGTGCGTTGAGTTCTATCTTCTCACAAAGCCGTTTGGAGCGAAAGGAGGAACTCTCTTCAAGCTTATCCTTGCTTCTGTCGTAATGCTTGTTTTCGGATACGTTGGTGAAATCAGCGGTCCAGGACAAACAATGATGTGGGGAACAGTATCTACTATCGGATATCTCTATATCGTATATGAAGTTTTCGCAGGTGATGTTGCAAAGCTTACAGAAAGCTCAGACAGCCCTTCTTTGAAGAGTGCTATGTTCTTGATGAAGATCTTCATCACAGGT ILTVPLMCVEFYLLTKPFGAKGGTLFKLILASVVMLVFGYVGEISGPGQTMMWGTVSTIGYLYIVYEVFAGDVAKLTESSDSPSLKSAMFLMKIFITG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTGACCGTACCTCTCATGTGCGTTGAGTTCTATCTTCTCACAAAGCCG---------TTT------GGAGCGAAAGGA---GGAACT------------------------------------CTCTTCAAG---CTTATCCTTGCTTCTGTCGTAATGCTTGTTTTCGGATACGTTGGTGAA---------ATC------------------AGC------GGTCCA------------------------------------------------------------------------------------------------GGACAAACA------------------ATGATGTGG---GGAACAGTATCTACTATCGGATATCTCTATATCGTATATGAAGTT---------------TTC------GCA---GGTGATGTTGCAAAGCTTACAGAAAGC------TCA---GACAGCCCTTCTTTG---AAG---AGT---GCT---ATG---TTC---TTGATG---AAGATCTTCATCACAGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLTKP---F--GAKG-GT------------LFK-LILASVVMLVFGYVGE---I------S--GP--------------------------------GQT------MMW-GTVSTIGYLYIVYEV-----F--A-GDVAKLTES--S-DSPSL-K-S-A-M-F-LM-KIFITG-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Cyclobacteriaceae]_KJ929229 [II-CFB-Cyclobacteriaceae] PRGD_OTU090_baf61810a1b0dfad152636e52f1d5bd8 gb|KJ929229| PRGD_OTU090_baf61810a1b0dfad152636e52f1d5bd8, putative proteorhodopsin gene, partial cds. PRGD_OTU090_baf61810a1b0dfad152636e52f1d5bd8, putative proteorhodopsin gene, partial cds. KJ929229 [[proteorhodopsin super-cluster II/CFB-like cluster/Cyclobacteriaceae-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Cyclobacteriaceae-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTTTGACCGTACCTCTTATGTGCGTTGAGTTCTATCTTCTTACAAAGCCGTTTGGAGCGAAAGGAGGAACTCTCTTCAAGCTTATCCTTGCTTCTGTCGTGATGCTCGTTTTCGGGTACATTGGTGAAATCAGCGGCCCAGGACAAACAATGATGTGGGGAACAGTATCTACTATCGGATATCTCTATATCGTATATGAAGTTTTCGCAGGCGATGTTGCAAAGCTTACAGAAAGCTCAGACAGCCCTTCTTTGAAGAGTGCTATGTTCTTGATGAAGATTTTCGTCACAGGT ILTVPLMCVEFYLLTKPFGAKGGTLFKLILASVVMLVFGYIGEISGPGQTMMWGTVSTIGYLYIVYEVFAGDVAKLTESSDSPSLKSAMFLMKIFVTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTGACCGTACCTCTTATGTGCGTTGAGTTCTATCTTCTTACAAAGCCG---------TTT------GGAGCGAAAGGA---GGAACT------------------------------------CTCTTCAAG---CTTATCCTTGCTTCTGTCGTGATGCTCGTTTTCGGGTACATTGGTGAA---------ATC------------------AGC------GGCCCA------------------------------------------------------------------------------------------------GGACAAACA------------------ATGATGTGG---GGAACAGTATCTACTATCGGATATCTCTATATCGTATATGAAGTT---------------TTC------GCA---GGCGATGTTGCAAAGCTTACAGAAAGC------TCA---GACAGCCCTTCTTTG---AAG---AGT---GCT---ATG---TTC---TTGATG---AAGATTTTCGTCACAGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLTKP---F--GAKG-GT------------LFK-LILASVVMLVFGYIGE---I------S--GP--------------------------------GQT------MMW-GTVSTIGYLYIVYEV-----F--A-GDVAKLTES--S-DSPSL-K-S-A-M-F-LM-KIFVTG-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Cyclobacteriaceae]_KJ929224 [II-CFB-Cyclobacteriaceae] PRGD_OTU090_otuREP_71d58436697d6a3ad6a078a70d31a530 gb|KJ929224| PRGD_OTU090_otuREP_71d58436697d6a3ad6a078a70d31a530, putative proteorhodopsin gene, partial cds. PRGD_OTU090_otuREP_71d58436697d6a3ad6a078a70d31a530, putative proteorhodopsin gene, partial cds. KJ929224 [[proteorhodopsin super-cluster II/CFB-like cluster/Cyclobacteriaceae-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Cyclobacteriaceae-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATCTTGACAGTTCCTCTTATGTGCGTTGAATTCTATCTACTCACAAAGCCATTCGGAGCGAAAGGCGGTACACTCTTCAAGCTTATTGTTGCGTCAGTCGTAATGCTTGTATTCGGATACGTTGGCGAGATCAGTGGTCCTGGACAAACAATGATGTGGGGAACAGTCTCTACAGTAGGTTACCTCTACATCGTATATGAAGTTTTCGCAGGAGACGTTGCAAAACTTACAGAAAGCTCAAACAGTTCATCTTTGAAAAGCGCTATGTTCTTGATGAAGCTTTTCATCACAGCA ILTVPLMCVEFYLLTKPFGAKGGTLFKLIVASVVMLVFGYVGEISGPGQTMMWGTVSTVGYLYIVYEVFAGDVAKLTESSNSSSLKSAMFLMKLFITA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTGACAGTTCCTCTTATGTGCGTTGAATTCTATCTACTCACAAAGCCA---------TTC------GGAGCGAAAGGC---GGTACA------------------------------------CTCTTCAAG---CTTATTGTTGCGTCAGTCGTAATGCTTGTATTCGGATACGTTGGCGAG---------ATC------------------AGT------GGTCCT------------------------------------------------------------------------------------------------GGACAAACA------------------ATGATGTGG---GGAACAGTCTCTACAGTAGGTTACCTCTACATCGTATATGAAGTT---------------TTC------GCA---GGAGACGTTGCAAAACTTACAGAAAGC------TCA---AACAGTTCATCTTTG---AAA---AGC---GCT---ATG---TTC---TTGATG---AAGCTTTTCATCACAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLTKP---F--GAKG-GT------------LFK-LIVASVVMLVFGYVGE---I------S--GP--------------------------------GQT------MMW-GTVSTVGYLYIVYEV-----F--A-GDVAKLTES--S-NSSSL-K-S-A-M-F-LM-KLFITA-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Cyclobacteriaceae]_KJ929226 [II-CFB-Cyclobacteriaceae] PRGD_OTU090_6567c089aecf4350f5a0ae46588a0730 gb|KJ929226| PRGD_OTU090_6567c089aecf4350f5a0ae46588a0730, putative proteorhodopsin gene, partial cds. PRGD_OTU090_6567c089aecf4350f5a0ae46588a0730, putative proteorhodopsin gene, partial cds. KJ929226 [[proteorhodopsin super-cluster II/CFB-like cluster/Cyclobacteriaceae-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Cyclobacteriaceae-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) ATCTTAACGGTTCCTTTGATGTGTGTGGAATTCTATCTACTTACCAAGCCCTTTGGCGCGAAAGGTTCGACCCTTTTCAAGCTGATCGCAGCATCTATCGTCATGCTTGTGTTCGGGTACATTGGTGAGATCAGCGGACCCAGTCAAACAATGATGTGGGGAACTGTTTCCACAGTTGGATACATCTACGTGGTCTACGAAGTATTTGCTGGCGACGTTGCTAGACTTACAAAAGAGTCCAACAGCGAATCTTTGAAGAAGGCAATGTTCCTCATGAAGATCTTCATCACCGGT ILTVPLMCVEFYLLTKPFGAKGSTLFKLIAASIVMLVFGYIGEISGPSQTMMWGTVSTVGYIYVVYEVFAGDVARLTKESNSESLKKAMFLMKIFITG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAACGGTTCCTTTGATGTGTGTGGAATTCTATCTACTTACCAAGCCC---------TTT------GGCGCGAAAGGT---TCGACC------------------------------------CTTTTCAAG---CTGATCGCAGCATCTATCGTCATGCTTGTGTTCGGGTACATTGGTGAG---------ATC------------------AGC------GGACCC------------------------------------------------------------------------------------------------AGTCAAACA------------------ATGATGTGG---GGAACTGTTTCCACAGTTGGATACATCTACGTGGTCTACGAAGTA---------------TTT------GCT---GGCGACGTTGCTAGACTTACAAAAGAG------TCC---AACAGCGAATCTTTG---AAG---AAG---GCA---ATG---TTC---CTCATG---AAGATCTTCATCACCGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLTKP---F--GAKG-ST------------LFK-LIAASIVMLVFGYIGE---I------S--GP--------------------------------SQT------MMW-GTVSTVGYIYVVYEV-----F--A-GDVARLTKE--S-NSESL-K-K-A-M-F-LM-KIFITG-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-a]_KJ929408 [II-CFB-a] PRGD_OTU119_17bc594d5a471869ee0727f45feb59cb gb|KJ929408| PRGD_OTU119_17bc594d5a471869ee0727f45feb59cb, putative proteorhodopsin gene, partial cds. PRGD_OTU119_17bc594d5a471869ee0727f45feb59cb, putative proteorhodopsin gene, partial cds. KJ929408 [[proteorhodopsin super-cluster II/CFB-like cluster/A subcluster]] proteorhodopsin super-cluster II CFB-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) ATCCTTACTGTACCGCTAATGTGTGTAGAGTTTTATCTAATATTAAAACCATCAGGTGCTACGAAAAGTCTGTTATGGAAGTTAATTCTTCTTTCAGTAATTATGCTTGTTACCGGTTACTTCGGTGAAGCAGGTATAATGGGACTAGATGCTCAGTTATGGGGTCTAGCATCAGGTATAGCTTACTTCTGGATTCTTTATGAAGTTGCCATGGGTGGTGCAGCAAAGCTTGCAAAATCAGCAGGAGGTAATGTTGAGAGTGCACATAAAATGCTAGTTAAATTCGTATTCATA ILTVPLMCVEFYLILKPSGATKSLLWKLILLSVIMLVTGYFGEAGIMGLDAQLWGLASGIAYFWILYEVAMGGAAKLAKSAGGNVESAHKMLVKFVFI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCTTACTGTACCGCTAATGTGTGTAGAGTTTTATCTAATATTAAAACCA---------TCA------GGTGCTACGAAA---AGTCTG------------------------------------TTATGGAAG---TTAATTCTTCTTTCAGTAATTATGCTTGTTACCGGTTACTTCGGTGAA---------GCA------------------GGT------ATAATG------------------------------------------------------------------GGA---------------------------CTAGATGCT------------------CAGTTATGG---GGTCTAGCATCAGGTATAGCTTACTTCTGGATTCTTTATGAAGTT---------------GCC------ATG---GGTGGTGCAGCAAAGCTTGCAAAATCA------GCA---GGAGGTAAT---GTT---GAG---AGT---GCA---CAT---AAA---ATGCTA---GTTAAATTCGTATTCATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKP---S--GATK-SL------------LWK-LILLSVIMLVTGYFGE---A------G--IM----------------------G---------LDA------QLW-GLASGIAYFWILYEV-----A--M-GGAAKLAKS--A-GGN-V-E-S-A-H-K-ML-VKFVFI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-a]_KJ929407 [II-CFB-a] PRGD_OTU119_otuREP_5ea2e2b7d1446331dd1d863c18c0349e gb|KJ929407| PRGD_OTU119_otuREP_5ea2e2b7d1446331dd1d863c18c0349e, putative proteorhodopsin gene, partial cds. PRGD_OTU119_otuREP_5ea2e2b7d1446331dd1d863c18c0349e, putative proteorhodopsin gene, partial cds. KJ929407 [[proteorhodopsin super-cluster II/CFB-like cluster/A subcluster]] proteorhodopsin super-cluster II CFB-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) ATCCTTACTGTACCGCTAATGTGTGTAGAGTTTTATCTAATATTAAAACCATCAGGTGCTACGAAAAGTCTGTTATGGAAGTTAATTGCTCTTTCAGTTATTATGCTTGTTACCGGATACTTCGGTGAAGCAGGTATAATGGGACTAGATGCTCAGTTATGGGGTCTAGCATCAGGTATAGCTTACTTCTGGATTCTTTATGAAGTTGCCATGGGTGGTGCAGCAAAGCTTGCAAAATCAGCAGGAGGTAATGTTGAGAGTGCACATAAAATGCTAGTTAAATTCGTATTCATA ILTVPLMCVEFYLILKPSGATKSLLWKLIALSVIMLVTGYFGEAGIMGLDAQLWGLASGIAYFWILYEVAMGGAAKLAKSAGGNVESAHKMLVKFVFI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCTTACTGTACCGCTAATGTGTGTAGAGTTTTATCTAATATTAAAACCA---------TCA------GGTGCTACGAAA---AGTCTG------------------------------------TTATGGAAG---TTAATTGCTCTTTCAGTTATTATGCTTGTTACCGGATACTTCGGTGAA---------GCA------------------GGT------ATAATG------------------------------------------------------------------GGA---------------------------CTAGATGCT------------------CAGTTATGG---GGTCTAGCATCAGGTATAGCTTACTTCTGGATTCTTTATGAAGTT---------------GCC------ATG---GGTGGTGCAGCAAAGCTTGCAAAATCA------GCA---GGAGGTAAT---GTT---GAG---AGT---GCA---CAT---AAA---ATGCTA---GTTAAATTCGTATTCATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKP---S--GATK-SL------------LWK-LIALSVIMLVTGYFGE---A------G--IM----------------------G---------LDA------QLW-GLASGIAYFWILYEV-----A--M-GGAAKLAKS--A-GGN-V-E-S-A-H-K-ML-VKFVFI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-a]_KJ929411 [II-CFB-a] PRGD_OTU119_f77ea5c37cfce75f904af5c82faf281d gb|KJ929411| PRGD_OTU119_f77ea5c37cfce75f904af5c82faf281d, putative proteorhodopsin gene, partial cds. PRGD_OTU119_f77ea5c37cfce75f904af5c82faf281d, putative proteorhodopsin gene, partial cds. KJ929411 [[proteorhodopsin super-cluster II/CFB-like cluster/A subcluster]] proteorhodopsin super-cluster II CFB-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATCCTTACTGTACCGCTAATGTGTGTAGAGTTTTATCTAATATTAAAACCATCAGGTGCTACGAAAAGTCTGTTATGGAAGTTAATTGCTCTTTCAGTTATTATGCTTGTTACCGGATACTTCGGTGAAGCAGGTATAATGGGACTAGATGCTCAGTTATGGGGTCTAGCATCAGGTATAGCTTACTTCTGGATTCTTTATGAAGTTGCTTTAGGTGGTGCAGCAAAGCTTGCAAAATCAGCAGGAGGTAATGTTGAGAGTGCACATAAAATGCTAGTTAAATTCGTATTCATA ILTVPLMCVEFYLILKPSGATKSLLWKLIALSVIMLVTGYFGEAGIMGLDAQLWGLASGIAYFWILYEVALGGAAKLAKSAGGNVESAHKMLVKFVFI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCTTACTGTACCGCTAATGTGTGTAGAGTTTTATCTAATATTAAAACCA---------TCA------GGTGCTACGAAA---AGTCTG------------------------------------TTATGGAAG---TTAATTGCTCTTTCAGTTATTATGCTTGTTACCGGATACTTCGGTGAA---------GCA------------------GGT------ATAATG------------------------------------------------------------------GGA---------------------------CTAGATGCT------------------CAGTTATGG---GGTCTAGCATCAGGTATAGCTTACTTCTGGATTCTTTATGAAGTT---------------GCT------TTA---GGTGGTGCAGCAAAGCTTGCAAAATCA------GCA---GGAGGTAAT---GTT---GAG---AGT---GCA---CAT---AAA---ATGCTA---GTTAAATTCGTATTCATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKP---S--GATK-SL------------LWK-LIALSVIMLVTGYFGE---A------G--IM----------------------G---------LDA------QLW-GLASGIAYFWILYEV-----A--L-GGAAKLAKS--A-GGN-V-E-S-A-H-K-ML-VKFVFI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-a]_KJ929409 [II-CFB-a] PRGD_OTU119_3384eed2c4a0666a1589ab45e1a750b3 gb|KJ929409| PRGD_OTU119_3384eed2c4a0666a1589ab45e1a750b3, putative proteorhodopsin gene, partial cds. PRGD_OTU119_3384eed2c4a0666a1589ab45e1a750b3, putative proteorhodopsin gene, partial cds. KJ929409 [[proteorhodopsin super-cluster II/CFB-like cluster/A subcluster]] proteorhodopsin super-cluster II CFB-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) ATCTTAACTGTACCACTAATGTGTGTAGAGTTTTATCTAATTTTAAAGCCATCAGGTGCTTCAAAAAGTCTGTTATGGAAGTTAATTGCTCTTTCAGTCATAATGCTTGTTACTGGATACTTCGGTGAAGCAGGTATAATGGGACTAGACGCTCAGTTATGGGGTCTTGCTTCAGGTTTAGCATATTTTGCTATTGTTGCTGAAGTTAAGTTTGGTGGCGCATCAAAACTTGCTAAATCAGCAGGAGGAAATGTTGAAAGCGCACATAAAATGTTATGTAATTTCGTACTTATA ILTVPLMCVEFYLILKPSGASKSLLWKLIALSVIMLVTGYFGEAGIMGLDAQLWGLASGLAYFAIVAEVKFGGASKLAKSAGGNVESAHKMLCNFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAACTGTACCACTAATGTGTGTAGAGTTTTATCTAATTTTAAAGCCA---------TCA------GGTGCTTCAAAA---AGTCTG------------------------------------TTATGGAAG---TTAATTGCTCTTTCAGTCATAATGCTTGTTACTGGATACTTCGGTGAA---------GCA------------------GGT------ATAATG------------------------------------------------------------------GGA---------------------------CTAGACGCT------------------CAGTTATGG---GGTCTTGCTTCAGGTTTAGCATATTTTGCTATTGTTGCTGAAGTT---------------AAG------TTT---GGTGGCGCATCAAAACTTGCTAAATCA------GCA---GGAGGAAAT---GTT---GAA---AGC---GCA---CAT---AAA---ATGTTA---TGTAATTTCGTACTTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKP---S--GASK-SL------------LWK-LIALSVIMLVTGYFGE---A------G--IM----------------------G---------LDA------QLW-GLASGLAYFAIVAEV-----K--F-GGASKLAKS--A-GGN-V-E-S-A-H-K-ML-CNFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-a]_KJ929708 [II-CFB-a] PRGD_OTU206_otuREP_f8a6d26260adb5a7f7b0da7262489571 gb|KJ929708| PRGD_OTU206_otuREP_f8a6d26260adb5a7f7b0da7262489571, putative proteorhodopsin gene, partial cds. PRGD_OTU206_otuREP_f8a6d26260adb5a7f7b0da7262489571, putative proteorhodopsin gene, partial cds. KJ929708 [[proteorhodopsin super-cluster II/CFB-like cluster/A subcluster]] proteorhodopsin super-cluster II CFB-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), English Channel (48.7717, -3.9683) ATTTTAACTGTACCACTTATGTGTGTTGAGTTTTATCTAATTTTAAAGCCATCAGGCGCTACTAAAGGTATGCTATGGAAATTAATTGGTCTTTCAACATTAATGCTTGTTACTGGATATTTCGGTGAAGCAGGTGTAATGGGATTAGATGCTCAACTATGGGGTCTAGTTTCAGGTTTAGCATATTTTGCAATTGTTCATGAAATATACATGGGTAATGCAGCTAGCCTTGCGAAATCTGCAGGAGGAAATGTAGAAAGTGCACATAAGATGTTATGTAAATTCGTACTGATA ILTVPLMCVEFYLILKPSGATKGMLWKLIGLSTLMLVTGYFGEAGVMGLDAQLWGLVSGLAYFAIVHEIYMGNAASLAKSAGGNVESAHKMLCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACTGTACCACTTATGTGTGTTGAGTTTTATCTAATTTTAAAGCCA---------TCA------GGCGCTACTAAA---GGTATG------------------------------------CTATGGAAA---TTAATTGGTCTTTCAACATTAATGCTTGTTACTGGATATTTCGGTGAA---------GCA------------------GGT------GTAATG------------------------------------------------------------------GGA---------------------------TTAGATGCT------------------CAACTATGG---GGTCTAGTTTCAGGTTTAGCATATTTTGCAATTGTTCATGAAATA---------------TAC------ATG---GGTAATGCAGCTAGCCTTGCGAAATCT------GCA---GGAGGAAAT---GTA---GAA---AGT---GCA---CAT---AAG---ATGTTA---TGTAAATTCGTACTGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKP---S--GATK-GM------------LWK-LIGLSTLMLVTGYFGE---A------G--VM----------------------G---------LDA------QLW-GLVSGLAYFAIVHEI-----Y--M-GNAASLAKS--A-GGN-V-E-S-A-H-K-ML-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-a]_KJ929709 [II-CFB-a] PRGD_OTU206_3b4f5171bb4636663425381794ad8c9e gb|KJ929709| PRGD_OTU206_3b4f5171bb4636663425381794ad8c9e, putative proteorhodopsin gene, partial cds. PRGD_OTU206_3b4f5171bb4636663425381794ad8c9e, putative proteorhodopsin gene, partial cds. KJ929709 [[proteorhodopsin super-cluster II/CFB-like cluster/A subcluster]] proteorhodopsin super-cluster II CFB-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTTTAACTGTACCACTTATGTGTGTTGAGTTTTATCTAATTTTAAAGCCATCAGGCGCTACTAAAAGTATGCTATGGAAGTTAATCGGTCTTTCAACTGTAATGCTTGTTACTGGATACTTCGGTGAAGCAGGTATAATGGGAATGGATGCTCAGATATGGGGTCTAGTTTCAGGTTTAGCATATTTTGCAATTGTTCATGAAATATTCATGGGTAATGCAGCTAGCCTTGCAAAATCTGCAGGAGGAAATGTAGAAAGTGCACACAAGATGTTATGTAAATTCGTTCTGATA ILTVPLMCVEFYLILKPSGATKSMLWKLIGLSTVMLVTGYFGEAGIMGMDAQIWGLVSGLAYFAIVHEIFMGNAASLAKSAGGNVESAHKMLCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACTGTACCACTTATGTGTGTTGAGTTTTATCTAATTTTAAAGCCA---------TCA------GGCGCTACTAAA---AGTATG------------------------------------CTATGGAAG---TTAATCGGTCTTTCAACTGTAATGCTTGTTACTGGATACTTCGGTGAA---------GCA------------------GGT------ATAATG------------------------------------------------------------------GGA---------------------------ATGGATGCT------------------CAGATATGG---GGTCTAGTTTCAGGTTTAGCATATTTTGCAATTGTTCATGAAATA---------------TTC------ATG---GGTAATGCAGCTAGCCTTGCAAAATCT------GCA---GGAGGAAAT---GTA---GAA---AGT---GCA---CAC---AAG---ATGTTA---TGTAAATTCGTTCTGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKP---S--GATK-SM------------LWK-LIGLSTVMLVTGYFGE---A------G--IM----------------------G---------MDA------QIW-GLVSGLAYFAIVHEI-----F--M-GNAASLAKS--A-GGN-V-E-S-A-H-K-ML-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-a]_KJ929410 [II-CFB-a] PRGD_OTU119_d7e78035b1d3d88df2d5ea25e2ce4f9e gb|KJ929410| PRGD_OTU119_d7e78035b1d3d88df2d5ea25e2ce4f9e, putative proteorhodopsin gene, partial cds. PRGD_OTU119_d7e78035b1d3d88df2d5ea25e2ce4f9e, putative proteorhodopsin gene, partial cds. KJ929410 [[proteorhodopsin super-cluster II/CFB-like cluster/A subcluster]] proteorhodopsin super-cluster II CFB-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) ATCTTAACTGTACCACTTATGTGTGTAGAGTTTTATCTAATTTTAAAGCCATCAGGTGCTACTAAAAGCCTATTGTGGAAACTTATTCTACTATCAACGGTAATGTTAGTAACTGGTTACTTCGGAGAAGCAGGTATTGGACCTCTAGACGCTCAATTATGGGGTCTTGTCTCTGGTATAGCTTATTTCGCTATAGTTGCTGAAATTTGGTTTGGTGGAGCTTCTAAGCTTGCTAAATCAGCTGGTGGTAACGTTGAGAGCGCACATAAAATGCTATGTAAATTCGTACTTATA ILTVPLMCVEFYLILKPSGATKSLLWKLILLSTVMLVTGYFGEAGIGPLDAQLWGLVSGIAYFAIVAEIWFGGASKLAKSAGGNVESAHKMLCKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAACTGTACCACTTATGTGTGTAGAGTTTTATCTAATTTTAAAGCCA---------TCA------GGTGCTACTAAA---AGCCTA------------------------------------TTGTGGAAA---CTTATTCTACTATCAACGGTAATGTTAGTAACTGGTTACTTCGGAGAA---------GCA------------------GGT------ATTGGA------------------------------------------------------------------CCT---------------------------CTAGACGCT------------------CAATTATGG---GGTCTTGTCTCTGGTATAGCTTATTTCGCTATAGTTGCTGAAATT---------------TGG------TTT---GGTGGAGCTTCTAAGCTTGCTAAATCA------GCT---GGTGGTAAC---GTT---GAG---AGC---GCA---CAT---AAA---ATGCTA---TGTAAATTCGTACTTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKP---S--GATK-SL------------LWK-LILLSTVMLVTGYFGE---A------G--IG----------------------P---------LDA------QLW-GLVSGIAYFAIVAEI-----W--F-GGASKLAKS--A-GGN-V-E-S-A-H-K-ML-CKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-a]_KJ929805 [II-CFB-a] PRGD_OTU256_otuREP_52f07a05da07f4c4ac1422993f39b049 gb|KJ929805| PRGD_OTU256_otuREP_52f07a05da07f4c4ac1422993f39b049, putative proteorhodopsin gene, partial cds. PRGD_OTU256_otuREP_52f07a05da07f4c4ac1422993f39b049, putative proteorhodopsin gene, partial cds. KJ929805 [[proteorhodopsin super-cluster II/CFB-like cluster/A subcluster]] proteorhodopsin super-cluster II CFB-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTTTAACTGTCCCTCTAATGTGTGTTGAATTCTATCTTATCCTAAGACCCTCAGGAGCTACAAAAGGATTAATGTGGAAATTAATTGGATTATCAACTATCATGCTTGTTGCAGGATACTTAGGAGAAGCTGTTTATACTGATGCAGCTGCATTAAGGGGAGGAATCGCTGGTGCTGCTTACTTCTGGATTGCTTATGAAGTTTGGCTAGGTGGTGCTTCCAAAATGGCTAAAGCTGCTGGAGGAGCCGTAGAGAGTGCTCATAAGAGTCTTTGTTGGTTCTTACTGGTT ILTVPLMCVEFYLILRPSGATKGLMWKLIGLSTIMLVAGYLGEAVYTDAAALRGGIAGAAYFWIAYEVWLGGASKMAKAAGGAVESAHKSLCWFLLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACTGTCCCTCTAATGTGTGTTGAATTCTATCTTATCCTAAGACCC---------TCA------GGAGCTACAAAA---GGATTA------------------------------------ATGTGGAAA---TTAATTGGATTATCAACTATCATGCTTGTTGCAGGATACTTAGGAGAA---------GCT------------------GTT------TATACT------------------------------------------------------------------------------------------------GATGCAGCT------------------GCATTAAGG---GGAGGAATCGCTGGTGCTGCTTACTTCTGGATTGCTTATGAAGTT---------------TGG------CTA---GGTGGTGCTTCCAAAATGGCTAAAGCT------GCT---GGAGGAGCC---GTA---GAG---AGT---GCT---CAT---AAG---AGTCTT---TGTTGGTTCTTACTGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILRP---S--GATK-GL------------MWK-LIGLSTIMLVAGYLGE---A------V--YT--------------------------------DAA------ALR-GGIAGAAYFWIAYEV-----W--L-GGASKMAKA--A-GGA-V-E-S-A-H-K-SL-CWFLLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-a]_KJ929660 [II-CFB-a] PRGD_OTU185_3615345aede8b4ca806f5f34227390d5 gb|KJ929660| PRGD_OTU185_3615345aede8b4ca806f5f34227390d5, putative proteorhodopsin gene, partial cds. PRGD_OTU185_3615345aede8b4ca806f5f34227390d5, putative proteorhodopsin gene, partial cds. KJ929660 [[proteorhodopsin super-cluster II/CFB-like cluster/A subcluster]] proteorhodopsin super-cluster II CFB-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-35.05, 23.73; -14.48, 113.45) ATACTAACAGTTCCGTTAATGTGTGTTGAATTTTACTTAATTCTAAAAGCTGCTGGTGCTACTAAAAGTATGATGTGGAGATTAATTTTCTTATCTACTATAATGTTAGTTACTGGTTACTTTGGTGAAGCTGTATATCCAGCACAAGCTCAAATTTGGGGTCTGATATCTGGTATAGCATATTTTGTTGTTGTATATGATATTTGGATTGGTGGCGCTGCAAAGCTAGCTGCTGCTGCTGGTGGATCTGTTGAAAAGGCTCACAAAACTTTATGTTGGTTTGTACTTGTT ILTVPLMCVEFYLILKAAGATKSMMWRLIFLSTIMLVTGYFGEAVYPAQAQIWGLISGIAYFVVVYDIWIGGAAKLAAAAGGSVEKAHKTLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTAACAGTTCCGTTAATGTGTGTTGAATTTTACTTAATTCTAAAAGCT---------GCT------GGTGCTACTAAA---AGTATG------------------------------------ATGTGGAGA---TTAATTTTCTTATCTACTATAATGTTAGTTACTGGTTACTTTGGTGAA---------GCT------------------GTA------TATCCA------------------------------------------------------------------------------------------------GCACAAGCT------------------CAAATTTGG---GGTCTGATATCTGGTATAGCATATTTTGTTGTTGTATATGATATT---------------TGG------ATT---GGTGGCGCTGCAAAGCTAGCTGCTGCT------GCT---GGTGGATCT---GTT---GAA---AAG---GCT---CAC---AAA---ACTTTA---TGTTGGTTTGTACTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATK-SM------------MWR-LIFLSTIMLVTGYFGE---A------V--YP--------------------------------AQA------QIW-GLISGIAYFVVVYDI-----W--I-GGAAKLAAA--A-GGS-V-E-K-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-a]_KJ929659 [II-CFB-a] PRGD_OTU185_otuREP_1edc91bb4062f6bdfaefc07a442ea044 gb|KJ929659| PRGD_OTU185_otuREP_1edc91bb4062f6bdfaefc07a442ea044, putative proteorhodopsin gene, partial cds. PRGD_OTU185_otuREP_1edc91bb4062f6bdfaefc07a442ea044, putative proteorhodopsin gene, partial cds. KJ929659 [[proteorhodopsin super-cluster II/CFB-like cluster/A subcluster]] proteorhodopsin super-cluster II CFB-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) ATACTAACAGTTCCATTAATGTGTGTTGAGTTTTACTTAATTCTAAAAGCTGCTGGTGCTACTAAAAGTATGATGTGGAGATTAATTTTCTTATCTACTATAATGTTAGTTACTGGTTACTTTGGTGAAGCTGTATATCCTGCACAAGCTCAAATTTGGGGTCTGATATCTGGTATAGCATATTTTGTTGTTGTATACGATATTTGGATTGGTGGTGCTGCAAAGCTAGCTGCCGCTGCTGGTGGATCTGTTGAAAAGGCTCACAAAACTTTATGTTGGTTTGTACTTGTT ILTVPLMCVEFYLILKAAGATKSMMWRLIFLSTIMLVTGYFGEAVYPAQAQIWGLISGIAYFVVVYDIWIGGAAKLAAAAGGSVEKAHKTLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTAACAGTTCCATTAATGTGTGTTGAGTTTTACTTAATTCTAAAAGCT---------GCT------GGTGCTACTAAA---AGTATG------------------------------------ATGTGGAGA---TTAATTTTCTTATCTACTATAATGTTAGTTACTGGTTACTTTGGTGAA---------GCT------------------GTA------TATCCT------------------------------------------------------------------------------------------------GCACAAGCT------------------CAAATTTGG---GGTCTGATATCTGGTATAGCATATTTTGTTGTTGTATACGATATT---------------TGG------ATT---GGTGGTGCTGCAAAGCTAGCTGCCGCT------GCT---GGTGGATCT---GTT---GAA---AAG---GCT---CAC---AAA---ACTTTA---TGTTGGTTTGTACTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATK-SM------------MWR-LIFLSTIMLVTGYFGE---A------V--YP--------------------------------AQA------QIW-GLISGIAYFVVVYDI-----W--I-GGAAKLAAA--A-GGS-V-E-K-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-a]_KJ929661 [II-CFB-a] PRGD_OTU185_b1d1eb1ff134a1f13f3515a93f224dfe gb|KJ929661| PRGD_OTU185_b1d1eb1ff134a1f13f3515a93f224dfe, putative proteorhodopsin gene, partial cds. PRGD_OTU185_b1d1eb1ff134a1f13f3515a93f224dfe, putative proteorhodopsin gene, partial cds. KJ929661 [[proteorhodopsin super-cluster II/CFB-like cluster/A subcluster]] proteorhodopsin super-cluster II CFB-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) ATACTAACAGTTCCATTAATGTGTGTTGAGTTTTACTTAATTCTAAAAGCTGCTGGTGCTACTAAAAGTATGATGTGGAGATTAATTTTCTTATCTACTATAATGTTAGTTACTGGTTACTTTGGTGAAGCTGTATATCCAGCACAAGCTCAAATTTGGGGTCTGATATCTGGTATAGCATATTTTGTTGTTGTATATGATATTTGGATTGGTGGTGCTGCAAAGCTAGCTGCCGCTGCTGGTGGATCTGTTGAAAAGGCTCACAAAACTTTATGTTGGTTTGTACTTGTT ILTVPLMCVEFYLILKAAGATKSMMWRLIFLSTIMLVTGYFGEAVYPAQAQIWGLISGIAYFVVVYDIWIGGAAKLAAAAGGSVEKAHKTLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTAACAGTTCCATTAATGTGTGTTGAGTTTTACTTAATTCTAAAAGCT---------GCT------GGTGCTACTAAA---AGTATG------------------------------------ATGTGGAGA---TTAATTTTCTTATCTACTATAATGTTAGTTACTGGTTACTTTGGTGAA---------GCT------------------GTA------TATCCA------------------------------------------------------------------------------------------------GCACAAGCT------------------CAAATTTGG---GGTCTGATATCTGGTATAGCATATTTTGTTGTTGTATATGATATT---------------TGG------ATT---GGTGGTGCTGCAAAGCTAGCTGCCGCT------GCT---GGTGGATCT---GTT---GAA---AAG---GCT---CAC---AAA---ACTTTA---TGTTGGTTTGTACTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATK-SM------------MWR-LIFLSTIMLVTGYFGE---A------V--YP--------------------------------AQA------QIW-GLISGIAYFVVVYDI-----W--I-GGAAKLAAA--A-GGS-V-E-K-A-H-K-TL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-a]_KJ929899 [II-CFB-a] PRGD_OTU350_otuREP_9fd0d9adf51cdff6c5d5d2fb86725e58 gb|KJ929899| PRGD_OTU350_otuREP_9fd0d9adf51cdff6c5d5d2fb86725e58, putative proteorhodopsin gene, partial cds. PRGD_OTU350_otuREP_9fd0d9adf51cdff6c5d5d2fb86725e58, putative proteorhodopsin gene, partial cds. KJ929899 [[proteorhodopsin super-cluster II/CFB-like cluster/A subcluster]] proteorhodopsin super-cluster II CFB-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; ; 67.49, -168.12), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) ATTTTAACAGTACCATTAATGTGTGTTGAATTTTACTTAATTTTAAAAGTTGCTGGTGCAACTAAAAACTTAATGTGGAAATTAATTGGTTTATCAACTGTTATGTTAGTAACAGGATATTTGGGTGAAGCGGTTTATAAAGGTTCAGCAGTACTATGGGGTACCATTTCTGCACTAGCTTACTTCGCTATAGTTTATGAAATATGGTTAGGTGGAGCAGCAAAAATGGCTAAAGAAGCAGGTGGTGATGTTGCCTCTGCTCACAAAATGTTATGCTGGTTTGTACTTGTA ILTVPLMCVEFYLILKVAGATKNLMWKLIGLSTVMLVTGYLGEAVYKGSAVLWGTISALAYFAIVYEIWLGGAAKMAKEAGGDVASAHKMLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACAGTACCATTAATGTGTGTTGAATTTTACTTAATTTTAAAAGTT---------GCT------GGTGCAACTAAA---AACTTA------------------------------------ATGTGGAAA---TTAATTGGTTTATCAACTGTTATGTTAGTAACAGGATATTTGGGTGAA---------GCG------------------GTT------TATAAA------------------------------------------------------------------------------------------------GGTTCAGCA------------------GTACTATGG---GGTACCATTTCTGCACTAGCTTACTTCGCTATAGTTTATGAAATA---------------TGG------TTA---GGTGGAGCAGCAAAAATGGCTAAAGAA------GCA---GGTGGTGAT---GTT---GCC---TCT---GCT---CAC---AAA---ATGTTA---TGCTGGTTTGTACTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-NL------------MWK-LIGLSTVMLVTGYLGE---A------V--YK--------------------------------GSA------VLW-GTISALAYFAIVYEI-----W--L-GGAAKMAKE--A-GGD-V-A-S-A-H-K-ML-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Flavobacterium]_KJ929429 [II-CFB-Flavobacterium] PRGD_OTU123_8a50c5274d17c1d83ff3cdc8005f9c83 gb|KJ929429| PRGD_OTU123_8a50c5274d17c1d83ff3cdc8005f9c83, putative proteorhodopsin gene, partial cds. PRGD_OTU123_8a50c5274d17c1d83ff3cdc8005f9c83, putative proteorhodopsin gene, partial cds. KJ929429 [[proteorhodopsin super-cluster II/CFB-like cluster/Flavobacterium-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Flavobacterium-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (72.0542, -130.8781), Mediterranean Sea (33.762, 29.175) GTATTGACGGTGCCATTAATGTGTCTTGAGTTTTACTTAATCTTGAAAGTTGCAGGGGCTAAGCAGTCTTTGTTATGGAAAATGATTATCTACTCTCTTGTCATGTTAGTTACAGGTTATTGGGGTGAGGTTGTTGATCCTGGTAACGCAGCAGCATGGGGATTCGCCTCAGGTGTTGCTTATTTCTTAATTGTTTATGAAATATGGATTGGTGAGGCTGCTAAATTGGCAAAATCTGCCGGTGGAAACACACTTGCTGCACACAAAATACTATGTTGGTTCGTACTTGTA VLTVPLMCLEFYLILKVAGAKQSLLWKMIIYSLVMLVTGYWGEVVDPGNAAAWGFASGVAYFLIVYEIWIGEAAKLAKSAGGNTLAAHKILCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTGACGGTGCCATTAATGTGTCTTGAGTTTTACTTAATCTTGAAAGTT---------GCA------GGGGCTAAGCAG---TCTTTG------------------------------------TTATGGAAA---ATGATTATCTACTCTCTTGTCATGTTAGTTACAGGTTATTGGGGTGAG---------GTT------------------GTT------GATCCT------------------------------------------------------------------------------------------------GGTAACGCA------------------GCAGCATGG---GGATTCGCCTCAGGTGTTGCTTATTTCTTAATTGTTTATGAAATA---------------TGG------ATT---GGTGAGGCTGCTAAATTGGCAAAATCT------GCC---GGTGGAAAC---ACA---CTT---GCT---GCA---CAC---AAA---ATACTA---TGTTGGTTCGTACTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCLEFYLILKV---A--GAKQ-SL------------LWK-MIIYSLVMLVTGYWGE---V------V--DP--------------------------------GNA------AAW-GFASGVAYFLIVYEI-----W--I-GEAAKLAKS--A-GGN-T-L-A-A-H-K-IL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Flavobacterium]_KJ929428 [II-CFB-Flavobacterium] PRGD_OTU123_2eb13fae49440c417bc2b261efddfb06 gb|KJ929428| PRGD_OTU123_2eb13fae49440c417bc2b261efddfb06, putative proteorhodopsin gene, partial cds. PRGD_OTU123_2eb13fae49440c417bc2b261efddfb06, putative proteorhodopsin gene, partial cds. KJ929428 [[proteorhodopsin super-cluster II/CFB-like cluster/Flavobacterium-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Flavobacterium-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na GTATTGACGGTACCATTGATGTGTCTTGAGTTTTACTTAATATTGAAAGTTGCAGGGGCTAAGCAGTCTTTGTTATGGAAAATGATACTGTATTCTCTTATCATGTTGGTAACAGGTTACTTTGGAGAGGTAGTAGATCCAAGTAATGCTGCACTTTGGGGATTTGCTTCAGGAGCTGCTTATTTCTTAATTGTTTATGAAATATGGATTGGTGAGGCTGCTAAATTGGCTAAAGCTGCCGGTGGAAACACACTTGCTGCACACAAAATACTATGTTGGTTTGTACTTGTA VLTVPLMCLEFYLILKVAGAKQSLLWKMILYSLIMLVTGYFGEVVDPSNAALWGFASGAAYFLIVYEIWIGEAAKLAKAAGGNTLAAHKILCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTGACGGTACCATTGATGTGTCTTGAGTTTTACTTAATATTGAAAGTT---------GCA------GGGGCTAAGCAG---TCTTTG------------------------------------TTATGGAAA---ATGATACTGTATTCTCTTATCATGTTGGTAACAGGTTACTTTGGAGAG---------GTA------------------GTA------GATCCA------------------------------------------------------------------------------------------------AGTAATGCT------------------GCACTTTGG---GGATTTGCTTCAGGAGCTGCTTATTTCTTAATTGTTTATGAAATA---------------TGG------ATT---GGTGAGGCTGCTAAATTGGCTAAAGCT------GCC---GGTGGAAAC---ACA---CTT---GCT---GCA---CAC---AAA---ATACTA---TGTTGGTTTGTACTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCLEFYLILKV---A--GAKQ-SL------------LWK-MILYSLIMLVTGYFGE---V------V--DP--------------------------------SNA------ALW-GFASGAAYFLIVYEI-----W--I-GEAAKLAKA--A-GGN-T-L-A-A-H-K-IL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Flavobacterium]_KJ929431 [II-CFB-Flavobacterium] PRGD_OTU123_d27d165a4e07da99a6ebd13cde42ab8e gb|KJ929431| PRGD_OTU123_d27d165a4e07da99a6ebd13cde42ab8e, putative proteorhodopsin gene, partial cds. PRGD_OTU123_d27d165a4e07da99a6ebd13cde42ab8e, putative proteorhodopsin gene, partial cds. KJ929431 [[proteorhodopsin super-cluster II/CFB-like cluster/Flavobacterium-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Flavobacterium-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na GTATTGACGGTACCATTAATGTGTCTTGAGTTTTACTTAATATTGAAAGTTGCAGGGGCTAAGCAGTCTTTGTTATGGAAAATGATTGTGTATTCTCTTATAATGTTGGTAACAGGTTACTTTGGAGAGGTAGTAGATCCAAGTAATGCTGCACTTTGGGGATTTGCTTCAGGAGCTGCTTATTTCTTAATTGTTTATGAAATATGGATTGGTGAGGCTGCTAAATTGGCTAAAGCTGCAGGTGGAAACACACTTGCTGCACACAGAGTACTACGTTGGTTTGTACTTGTA VLTVPLMCLEFYLILKVAGAKQSLLWKMIVYSLIMLVTGYFGEVVDPSNAALWGFASGAAYFLIVYEIWIGEAAKLAKAAGGNTLAAHRVLRWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTGACGGTACCATTAATGTGTCTTGAGTTTTACTTAATATTGAAAGTT---------GCA------GGGGCTAAGCAG---TCTTTG------------------------------------TTATGGAAA---ATGATTGTGTATTCTCTTATAATGTTGGTAACAGGTTACTTTGGAGAG---------GTA------------------GTA------GATCCA------------------------------------------------------------------------------------------------AGTAATGCT------------------GCACTTTGG---GGATTTGCTTCAGGAGCTGCTTATTTCTTAATTGTTTATGAAATA---------------TGG------ATT---GGTGAGGCTGCTAAATTGGCTAAAGCT------GCA---GGTGGAAAC---ACA---CTT---GCT---GCA---CAC---AGA---GTACTA---CGTTGGTTTGTACTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCLEFYLILKV---A--GAKQ-SL------------LWK-MIVYSLIMLVTGYFGE---V------V--DP--------------------------------SNA------ALW-GFASGAAYFLIVYEI-----W--I-GEAAKLAKA--A-GGN-T-L-A-A-H-R-VL-RWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Flavobacterium]_KJ929430 [II-CFB-Flavobacterium] PRGD_OTU123_8e3ece401484f0823597a7d8bc8ff6a2 gb|KJ929430| PRGD_OTU123_8e3ece401484f0823597a7d8bc8ff6a2, putative proteorhodopsin gene, partial cds. PRGD_OTU123_8e3ece401484f0823597a7d8bc8ff6a2, putative proteorhodopsin gene, partial cds. KJ929430 [[proteorhodopsin super-cluster II/CFB-like cluster/Flavobacterium-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Flavobacterium-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097), Arctic Ocean-Pacific side (72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683) GTATTGACGGTACCATTAATGTGTCTTGAGTTTTACTTAATATTGAAAGTTGCAGGGGCTAAGCAGTCTTTGTTATGGAAAATGATTGTGTATTCTCTTATAATGTTGGTAACAGGTTACTTTGGAGAGGTAGTAGATCCAAGTAATGCTGCACTTTGGGGATTTGCTTCAGGAGCTGCTTATTTCTTAATTGTTTATGAAATATGGATTGGTGAGGCTGCTAAATTGGCTAAAGCTGCAGGTGGAAACACACTTGCTGCACATAAAATACTATGTTGGTCTGTACTTGTA VLTVPLMCLEFYLILKVAGAKQSLLWKMIVYSLIMLVTGYFGEVVDPSNAALWGFASGAAYFLIVYEIWIGEAAKLAKAAGGNTLAAHKILCWSVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTGACGGTACCATTAATGTGTCTTGAGTTTTACTTAATATTGAAAGTT---------GCA------GGGGCTAAGCAG---TCTTTG------------------------------------TTATGGAAA---ATGATTGTGTATTCTCTTATAATGTTGGTAACAGGTTACTTTGGAGAG---------GTA------------------GTA------GATCCA------------------------------------------------------------------------------------------------AGTAATGCT------------------GCACTTTGG---GGATTTGCTTCAGGAGCTGCTTATTTCTTAATTGTTTATGAAATA---------------TGG------ATT---GGTGAGGCTGCTAAATTGGCTAAAGCT------GCA---GGTGGAAAC---ACA---CTT---GCT---GCA---CAT---AAA---ATACTA---TGTTGGTCTGTACTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCLEFYLILKV---A--GAKQ-SL------------LWK-MIVYSLIMLVTGYFGE---V------V--DP--------------------------------SNA------ALW-GFASGAAYFLIVYEI-----W--I-GEAAKLAKA--A-GGN-T-L-A-A-H-K-IL-CWSVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Flavobacterium]_KJ929427 [II-CFB-Flavobacterium] PRGD_OTU123_otuREP_fbacbf54b9fd86a4c3020ea92d4ce088 gb|KJ929427| PRGD_OTU123_otuREP_fbacbf54b9fd86a4c3020ea92d4ce088, putative proteorhodopsin gene, partial cds. PRGD_OTU123_otuREP_fbacbf54b9fd86a4c3020ea92d4ce088, putative proteorhodopsin gene, partial cds. KJ929427 [[proteorhodopsin super-cluster II/CFB-like cluster/Flavobacterium-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Flavobacterium-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Indian Ocean (-35.05, 23.73) GTATTGACGGTACCATTAATGTGTCTTGAGTTTTACTTAATATTGAAAGTTGCAGGGGCTAAGCAGTCTTTGTTATGGAAAATGATTGTGTATTCTCTTATAATGTTGGTAACAGGTTACTTTGGAGAGGTAGTAGATCCAAGTAATGCTGCACTTTGGGGATTTGCTTCAGGAGCTGCTTATTTCTTAATTGTTTATGAAATATGGATTGGTGAGGCTGCTAAATTGGCTAAAGCTGCAGGTGGAAACACACTTGCTGCACACAAAATACTATGTTGGTTTGTACTTGTA VLTVPLMCLEFYLILKVAGAKQSLLWKMIVYSLIMLVTGYFGEVVDPSNAALWGFASGAAYFLIVYEIWIGEAAKLAKAAGGNTLAAHKILCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTGACGGTACCATTAATGTGTCTTGAGTTTTACTTAATATTGAAAGTT---------GCA------GGGGCTAAGCAG---TCTTTG------------------------------------TTATGGAAA---ATGATTGTGTATTCTCTTATAATGTTGGTAACAGGTTACTTTGGAGAG---------GTA------------------GTA------GATCCA------------------------------------------------------------------------------------------------AGTAATGCT------------------GCACTTTGG---GGATTTGCTTCAGGAGCTGCTTATTTCTTAATTGTTTATGAAATA---------------TGG------ATT---GGTGAGGCTGCTAAATTGGCTAAAGCT------GCA---GGTGGAAAC---ACA---CTT---GCT---GCA---CAC---AAA---ATACTA---TGTTGGTTTGTACTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCLEFYLILKV---A--GAKQ-SL------------LWK-MIVYSLIMLVTGYFGE---V------V--DP--------------------------------SNA------ALW-GFASGAAYFLIVYEI-----W--I-GEAAKLAKA--A-GGN-T-L-A-A-H-K-IL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Psychroflexus]_KJ929873 [II-CFB-Psychroflexus] PRGD_OTU324_otuREP_04bf126ac25935f671d452a83bc3e7ce gb|KJ929873| PRGD_OTU324_otuREP_04bf126ac25935f671d452a83bc3e7ce, putative proteorhodopsin gene, partial cds. PRGD_OTU324_otuREP_04bf126ac25935f671d452a83bc3e7ce, putative proteorhodopsin gene, partial cds. KJ929873 [[proteorhodopsin super-cluster II/CFB-like cluster/Psychroflexus-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Psychroflexus-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) ATTTTAACAGTACCATTAATGTGTGTTGAGTTCTATCTAATTTTAAAAGTTGCTGGAGCAACAAAGAGTATGATGTGGAAACTTATCTTCTGGTCAACTGTAATGTTAGTTACAGGTTTCTTTGGTGAGTACAACGAAGGTTCTGCATTAGGATTAGGTCCTGCTTTATGGGGATTATTATCTGGTCTTGCATACTTCTATATTGCTTACATGGTATGGTTTGGAGAAGCTAAAAAACTTGCTGTATCAGCAGGTGGAGCAGTTGAAAAAGCTCACAACACTTTAGCATGGTTCGTTCTTGTA ILTVPLMCVEFYLILKVAGATKSMMWKLIFWSTVMLVTGFFGEYNEGSALGLGPALWGLLSGLAYFYIAYMVWFGEAKKLAVSAGGAVEKAHNTLAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACAGTACCATTAATGTGTGTTGAGTTCTATCTAATTTTAAAAGTT---------GCT------GGAGCAACAAAG---AGTATG------------------------------------ATGTGGAAA---CTTATCTTCTGGTCAACTGTAATGTTAGTTACAGGTTTCTTTGGTGAG---------TAC------------------AAC------GAAGGT---------------------------------------------TCT---GCATTA---------GGA---------------------------TTAGGTCCT------------------GCTTTATGG---GGATTATTATCTGGTCTTGCATACTTCTATATTGCTTACATGGTA---------------TGG------TTT---GGAGAAGCTAAAAAACTTGCTGTATCA------GCA---GGTGGAGCA---GTT---GAA---AAA---GCT---CAC---AAC---ACTTTA---GCATGGTTCGTTCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GATK-SM------------MWK-LIFWSTVMLVTGFFGE---Y------N--EG---------------S-AL---G---------LGP------ALW-GLLSGLAYFYIAYMV-----W--F-GEAKKLAVS--A-GGA-V-E-K-A-H-N-TL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Krokinobacter]_KJ929508 [II-CFB-Krokinobacter] PRGD_OTU140a_7b616e4b5f8496bfcddfa942d47684a0 gb|KJ929508| PRGD_OTU140a_7b616e4b5f8496bfcddfa942d47684a0, putative proteorhodopsin gene, partial cds. PRGD_OTU140a_7b616e4b5f8496bfcddfa942d47684a0, putative proteorhodopsin gene, partial cds. KJ929508 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia PRO95-like Krokinobacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia PRO95-like Krokinobacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) ATCCTAACAGTTCCTTTAATGTGTGTTGAATTCTATTTAATACTAAAGGTAGCAGGTGCTAAACAAAGTTTAATGTGGAAAATGATAGGTTTATCAGTTGTTATGTTAGTAACAGGATATTGGGGTGAGGCAGTAGCTACTGACCAAGCAGCCCTTTGGGGAGCAATCTCTGGAGCAGCTTATTTCTGGATTGTTTATGAGATCTGGTTAGGTGGTGCGAAAAAACTTGCCGAAGCAGCTGGAGGAGATGTTCTTAGCGCACACAAAATTCTATGTTGGTTTGTACTTGTT ILTVPLMCVEFYLILKVAGAKQSLMWKMIGLSVVMLVTGYWGEAVATDQAALWGAISGAAYFWIVYEIWLGGAKKLAEAAGGDVLSAHKILCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCTAACAGTTCCTTTAATGTGTGTTGAATTCTATTTAATACTAAAGGTA---------GCA------GGTGCTAAACAA---AGTTTA------------------------------------ATGTGGAAA---ATGATAGGTTTATCAGTTGTTATGTTAGTAACAGGATATTGGGGTGAG---------GCA------------------GTA------GCTACT------------------------------------------------------------------------------------------------GACCAAGCA------------------GCCCTTTGG---GGAGCAATCTCTGGAGCAGCTTATTTCTGGATTGTTTATGAGATC---------------TGG------TTA---GGTGGTGCGAAAAAACTTGCCGAAGCA------GCT---GGAGGAGAT---GTT---CTT---AGC---GCA---CAC---AAA---ATTCTA---TGTTGGTTTGTACTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GAKQ-SL------------MWK-MIGLSVVMLVTGYWGE---A------V--AT--------------------------------DQA------ALW-GAISGAAYFWIVYEI-----W--L-GGAKKLAEA--A-GGD-V-L-S-A-H-K-IL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Krokinobacter]_KJ929507 [II-CFB-Krokinobacter] PRGD_OTU140a_607e1b44558268f2361628a1506bf83a gb|KJ929507| PRGD_OTU140a_607e1b44558268f2361628a1506bf83a, putative proteorhodopsin gene, partial cds. PRGD_OTU140a_607e1b44558268f2361628a1506bf83a, putative proteorhodopsin gene, partial cds. KJ929507 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia PRO95-like Krokinobacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia PRO95-like Krokinobacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) ATTTTAACAGTTCCTTTAATGTGTGTTGAATTCTACCTCATACTAAAGGTAGCAGGTGCAAAACAAAGTTTAATGTGGAAAATGATTGGTTTATCAGTTGTTATGTTAGTAACAGGATATTGGGGTGAGGCAGTAGCTACTGACCAAGCAGCTCTTTGGGGAGCAATTTCTGGAGCAGCTTATTTCTGGATTGTTTATGAGATCTGGTTAGGTGGTGCTAAAAAACTTGCCGAAGCAGCTGGAGGAGATGTTCTTAGCGCACACAAAATTCTATGTTGGTTTGTCCTTGTT ILTVPLMCVEFYLILKVAGAKQSLMWKMIGLSVVMLVTGYWGEAVATDQAALWGAISGAAYFWIVYEIWLGGAKKLAEAAGGDVLSAHKILCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACAGTTCCTTTAATGTGTGTTGAATTCTACCTCATACTAAAGGTA---------GCA------GGTGCAAAACAA---AGTTTA------------------------------------ATGTGGAAA---ATGATTGGTTTATCAGTTGTTATGTTAGTAACAGGATATTGGGGTGAG---------GCA------------------GTA------GCTACT------------------------------------------------------------------------------------------------GACCAAGCA------------------GCTCTTTGG---GGAGCAATTTCTGGAGCAGCTTATTTCTGGATTGTTTATGAGATC---------------TGG------TTA---GGTGGTGCTAAAAAACTTGCCGAAGCA------GCT---GGAGGAGAT---GTT---CTT---AGC---GCA---CAC---AAA---ATTCTA---TGTTGGTTTGTCCTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GAKQ-SL------------MWK-MIGLSVVMLVTGYWGE---A------V--AT--------------------------------DQA------ALW-GAISGAAYFWIVYEI-----W--L-GGAKKLAEA--A-GGD-V-L-S-A-H-K-IL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Krokinobacter]_KJ929506 [II-CFB-Krokinobacter] PRGD_OTU140a_otuREP_d1d9c5875e75529064363f0ee67d5c19 gb|KJ929506| PRGD_OTU140a_otuREP_d1d9c5875e75529064363f0ee67d5c19, putative proteorhodopsin gene, partial cds. PRGD_OTU140a_otuREP_d1d9c5875e75529064363f0ee67d5c19, putative proteorhodopsin gene, partial cds. KJ929506 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia PRO95-like Krokinobacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia PRO95-like Krokinobacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -33.9602, -73.3769), Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) ATTTTAACAGTTCCGTTAATGTGTGTTGAATTCTACCTAATTTTAAAGGTGGCAGGTGCAAAACAAAGTTTAATGTGGAAAATGATTGGTTTATCTGTAGTTATGTTAGTTACAGGATATTGGGGAGAGGCTGTAGCCACTGACCAAGCAGCCCTTTGGGGAGCAATCTCTGGAGCAGCTTATTTCTGGATCGTTTACGAAATCTGGTTGGGTGGAGCAAAAAAACTAGCTGAAGCAGCTGGAGGAGATGTTCTTAGTGCTCACAAAATTCTATGTTGGTTTGTCTTAGTA ILTVPLMCVEFYLILKVAGAKQSLMWKMIGLSVVMLVTGYWGEAVATDQAALWGAISGAAYFWIVYEIWLGGAKKLAEAAGGDVLSAHKILCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACAGTTCCGTTAATGTGTGTTGAATTCTACCTAATTTTAAAGGTG---------GCA------GGTGCAAAACAA---AGTTTA------------------------------------ATGTGGAAA---ATGATTGGTTTATCTGTAGTTATGTTAGTTACAGGATATTGGGGAGAG---------GCT------------------GTA------GCCACT------------------------------------------------------------------------------------------------GACCAAGCA------------------GCCCTTTGG---GGAGCAATCTCTGGAGCAGCTTATTTCTGGATCGTTTACGAAATC---------------TGG------TTG---GGTGGAGCAAAAAAACTAGCTGAAGCA------GCT---GGAGGAGAT---GTT---CTT---AGT---GCT---CAC---AAA---ATTCTA---TGTTGGTTTGTCTTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GAKQ-SL------------MWK-MIGLSVVMLVTGYWGE---A------V--AT--------------------------------DQA------ALW-GAISGAAYFWIVYEI-----W--L-GGAKKLAEA--A-GGD-V-L-S-A-H-K-IL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Krokinobacter]_KJ929836 [II-CFB-Krokinobacter] PRGD_OTU287_otuREP_78a72bd15f0720b34bf827fc6a1028dc gb|KJ929836| PRGD_OTU287_otuREP_78a72bd15f0720b34bf827fc6a1028dc, putative proteorhodopsin gene, partial cds. PRGD_OTU287_otuREP_78a72bd15f0720b34bf827fc6a1028dc, putative proteorhodopsin gene, partial cds. KJ929836 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia PRO95-like Krokinobacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia PRO95-like Krokinobacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) ATTTTAACCGTTCCATTAATGTGCGTTGAATTTTACTTGATATTAAAAGCAGCAGGTGCCACACAAAGGCACATGTGGGTTCTAATATTAGTATCCACAATTATGTTGGTGTTCGGATATTTAGGTGAAGGCGTTTATCCTTCTTCTGCTGCACTTCTTGGAGGTATTTCGGGTGCCGCTTATTTTTATCTTTTCTATCTTATTAGATGGGGAGAACTAAAAAAACTTGCTGTCGCAGCTGGAGGGCCCGTTGAAAAGGCTCACAATATGCTGTGTTGGTTTGTTCTTGTG ILTVPLMCVEFYLILKAAGATQRHMWVLILVSTIMLVFGYLGEGVYPSSAALLGGISGAAYFYLFYLIRWGELKKLAVAAGGPVEKAHNMLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACCGTTCCATTAATGTGCGTTGAATTTTACTTGATATTAAAAGCA---------GCA------GGTGCCACACAA---AGGCAC------------------------------------ATGTGGGTT---CTAATATTAGTATCCACAATTATGTTGGTGTTCGGATATTTAGGTGAA---------GGC------------------GTT------TATCCT------------------------------------------------------------------------------------------------TCTTCTGCT------------------GCACTTCTT---GGAGGTATTTCGGGTGCCGCTTATTTTTATCTTTTCTATCTTATT---------------AGA------TGG---GGAGAACTAAAAAAACTTGCTGTCGCA------GCT---GGAGGGCCC---GTT---GAA---AAG---GCT---CAC---AAT---ATGCTG---TGTTGGTTTGTTCTTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKA---A--GATQ-RH------------MWV-LILVSTIMLVFGYLGE---G------V--YP--------------------------------SSA------ALL-GGISGAAYFYLFYLI-----R--W-GELKKLAVA--A-GGP-V-E-K-A-H-N-ML-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Krokinobacter]_KJ929904 [II-CFB-Krokinobacter] PRGD_OTU355_otuREP_9c04a11a0ba65e83245e6ebffa8570d3 gb|KJ929904| PRGD_OTU355_otuREP_9c04a11a0ba65e83245e6ebffa8570d3, putative proteorhodopsin gene, partial cds. PRGD_OTU355_otuREP_9c04a11a0ba65e83245e6ebffa8570d3, putative proteorhodopsin gene, partial cds. KJ929904 [[proteorhodopsin super-cluster II/CFB-like cluster/Dokdonia PRO95-like Krokinobacter-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Dokdonia PRO95-like Krokinobacter-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683) ATTTTGACTGTGCCATTGATGTGCGTTGAATTCTACTTAATATTAAAAGTAGCAGGGGCAAAGCAAAGTTTATTATGGAAATTGATTTTCTTCTCTGTAATCATGTTAGTAACAGGTTACCTTGGTGAAACAATTTACAGTGATCAGGCATCGTTTTGGGGATTAATTTCTGGAGCTGCATATTTCTATATTGTTTATGAAATATGGTTAGGTTCTGCAAAGAAATTAGCAGTAGCTGCTGGTGGAGATGTACTGAAAGCGCACAAAGTTCTGTGTTGGTTTGTTCTTGTC ILTVPLMCVEFYLILKVAGAKQSLLWKLIFFSVIMLVTGYLGETIYSDQASFWGLISGAAYFYIVYEIWLGSAKKLAVAAGGDVLKAHKVLCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTGACTGTGCCATTGATGTGCGTTGAATTCTACTTAATATTAAAAGTA---------GCA------GGGGCAAAGCAA---AGTTTA------------------------------------TTATGGAAA---TTGATTTTCTTCTCTGTAATCATGTTAGTAACAGGTTACCTTGGTGAA---------ACA------------------ATT------TACAGT------------------------------------------------------------------------------------------------GATCAGGCA------------------TCGTTTTGG---GGATTAATTTCTGGAGCTGCATATTTCTATATTGTTTATGAAATA---------------TGG------TTA---GGTTCTGCAAAGAAATTAGCAGTAGCT------GCT---GGTGGAGAT---GTA---CTG---AAA---GCG---CAC---AAA---GTTCTG---TGTTGGTTTGTTCTTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GAKQ-SL------------LWK-LIFFSVIMLVTGYLGE---T------I--YS--------------------------------DQA------SFW-GLISGAAYFYIVYEI-----W--L-GSAKKLAVA--A-GGD-V-L-K-A-H-K-VL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-Maribacter]_KJ929509 [II-CFB-Maribacter] PRGD_OTU140b_otuREP_2108f30314108fd5ce47b43ca3368d31 gb|KJ929509| PRGD_OTU140b_otuREP_2108f30314108fd5ce47b43ca3368d31, putative proteorhodopsin gene, partial cds. PRGD_OTU140b_otuREP_2108f30314108fd5ce47b43ca3368d31, putative proteorhodopsin gene, partial cds. KJ929509 [[proteorhodopsin super-cluster II/CFB-like cluster/Maribacter-like Winogradskyella-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster Maribacter-like Winogradskyella-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683) ATTTTAACAGTTCCGCTTATGTGTGTAGAGTTTTACTTAATTCTTAAAGTAGCTGGAGCTAAAACCTCACTATTGTGGAAAATGATTGGTTTATCTGTTGTTATGCTAGTAACAGGTTACTTTGGAGAAGCGGTTTTCTCAGAAGATGCTGCTTTATGGGGAGCAATATCAGGAGCTGCTTATTTCTTAATTGTTTATGAAATATGGTTTGGAAATGCAAAGAAATTAGCGGTTGCAGCTGGTGGAGATGTGTTAAAATCACATAAAATTCTATGCTGGTTTGTATTAGTA ILTVPLMCVEFYLILKVAGAKTSLLWKMIGLSVVMLVTGYFGEAVFSEDAALWGAISGAAYFLIVYEIWFGNAKKLAVAAGGDVLKSHKILCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACAGTTCCGCTTATGTGTGTAGAGTTTTACTTAATTCTTAAAGTA---------GCT------GGAGCTAAAACC---TCACTA------------------------------------TTGTGGAAA---ATGATTGGTTTATCTGTTGTTATGCTAGTAACAGGTTACTTTGGAGAA---------GCG------------------GTT------TTCTCA------------------------------------------------------------------------------------------------GAAGATGCT------------------GCTTTATGG---GGAGCAATATCAGGAGCTGCTTATTTCTTAATTGTTTATGAAATA---------------TGG------TTT---GGAAATGCAAAGAAATTAGCGGTTGCA------GCT---GGTGGAGAT---GTG---TTA---AAA---TCA---CAT---AAA---ATTCTA---TGCTGGTTTGTATTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLILKV---A--GAKT-SL------------LWK-MIGLSVVMLVTGYFGE---A------V--FS--------------------------------EDA------ALW-GAISGAAYFLIVYEI-----W--F-GNAKKLAVA--A-GGD-V-L-K-S-H-K-IL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB]_KJ929744 [II-CFB] PRGD_OTU224_otuREP_b942188952e7c94e4809639a253daf54 gb|KJ929744| PRGD_OTU224_otuREP_b942188952e7c94e4809639a253daf54, putative proteorhodopsin gene, partial cds. PRGD_OTU224_otuREP_b942188952e7c94e4809639a253daf54, putative proteorhodopsin gene, partial cds. KJ929744 [[proteorhodopsin super-cluster II/CFB-like cluster]] proteorhodopsin super-cluster II CFB-like cluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) GTTCTAACAGTTCCTTTAATGTGTGTTGAATTCTACCTTATTTTAAAAGTAGCAGGTGCTAAAAAATCTTTGATGTGGAAATTAATATTTGCTTCAATGATAATGTTAATTGCAGGTTACTTCGGAGAAGCTGTGTATACAGACCAATCTGCCTTGTGGGGGTTAATTTCAGGTTTGGCTTATTTCTATATTGTATATGAAATTTGGTTAGGAAGTGCCAAAAAATTAGCAGTTGATGCTGGTGGAGATGTTTTACAAGCACACAAGATTTTATGTTGGTTCGTATTAGTT VLTVPLMCVEFYLILKVAGAKKSLMWKLIFASMIMLIAGYFGEAVYTDQSALWGLISGLAYFYIVYEIWLGSAKKLAVDAGGDVLQAHKILCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTCTAACAGTTCCTTTAATGTGTGTTGAATTCTACCTTATTTTAAAAGTA---------GCA------GGTGCTAAAAAA---TCTTTG------------------------------------ATGTGGAAA---TTAATATTTGCTTCAATGATAATGTTAATTGCAGGTTACTTCGGAGAA---------GCT------------------GTG------TATACA------------------------------------------------------------------------------------------------GACCAATCT------------------GCCTTGTGG---GGGTTAATTTCAGGTTTGGCTTATTTCTATATTGTATATGAAATT---------------TGG------TTA---GGAAGTGCCAAAAAATTAGCAGTTGAT------GCT---GGTGGAGAT---GTT---TTA---CAA---GCA---CAC---AAG---ATTTTA---TGTTGGTTCGTATTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKV---A--GAKK-SL------------MWK-LIFASMIMLIAGYFGE---A------V--YT--------------------------------DQS------ALW-GLISGLAYFYIVYEI-----W--L-GSAKKLAVD--A-GGD-V-L-Q-A-H-K-IL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB]_KJ929745 [II-CFB] PRGD_OTU224_e43f49ad4c49a7d18fb80092b5323afc gb|KJ929745| PRGD_OTU224_e43f49ad4c49a7d18fb80092b5323afc, putative proteorhodopsin gene, partial cds. PRGD_OTU224_e43f49ad4c49a7d18fb80092b5323afc, putative proteorhodopsin gene, partial cds. KJ929745 [[proteorhodopsin super-cluster II/CFB-like cluster]] proteorhodopsin super-cluster II CFB-like cluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Bering strait marine 67.49 -168.12 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097), Arctic Ocean-Pacific side (72.0542, -130.8781; ; 67.49, -168.12) GTTCTAACAGTTCCTTTAATGTGTGTTGAATTCTACCTTATTTTAAAAGTAGCAGGTGCTAAAAAATCTTTGATGTGGAAATTAATATTTGCTTCAATGATAATGTTAATTGCGGGTTATTTTGGAGAAGCTGTTTATACAGGTCAATCTGCCTTGTGGGGAACAATTTCAGCTTTAGCTTATTTCTATATTGTATATGAAATATGGCTTGGAAGTGCTAAAAAATTAGCAGTTAGTGCTGGTGGAGATGTTTTACATGCTCACAAGATTTTATGTTGGTTCGTATTAGTT VLTVPLMCVEFYLILKVAGAKKSLMWKLIFASMIMLIAGYFGEAVYTGQSALWGTISALAYFYIVYEIWLGSAKKLAVSAGGDVLHAHKILCWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTCTAACAGTTCCTTTAATGTGTGTTGAATTCTACCTTATTTTAAAAGTA---------GCA------GGTGCTAAAAAA---TCTTTG------------------------------------ATGTGGAAA---TTAATATTTGCTTCAATGATAATGTTAATTGCGGGTTATTTTGGAGAA---------GCT------------------GTT------TATACA------------------------------------------------------------------------------------------------GGTCAATCT------------------GCCTTGTGG---GGAACAATTTCAGCTTTAGCTTATTTCTATATTGTATATGAAATA---------------TGG------CTT---GGAAGTGCTAAAAAATTAGCAGTTAGT------GCT---GGTGGAGAT---GTT---TTA---CAT---GCT---CAC---AAG---ATTTTA---TGTTGGTTCGTATTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLILKV---A--GAKK-SL------------MWK-LIFASMIMLIAGYFGE---A------V--YT--------------------------------GQS------ALW-GTISALAYFYIVYEI-----W--L-GSAKKLAVS--A-GGD-V-L-H-A-H-K-IL-CWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929625 [II-CFB-AAA027E17] PRGD_OTU173_6e5366f1664bd0f72e618de713f5f3fb gb|KJ929625| PRGD_OTU173_6e5366f1664bd0f72e618de713f5f3fb, putative proteorhodopsin gene, partial cds. PRGD_OTU173_6e5366f1664bd0f72e618de713f5f3fb, putative proteorhodopsin gene, partial cds. KJ929625 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683) TTATTAACTGTGCCTTTAATGTGTGTTGAATTCTATTTAATCACAAAGAAAGCAGGTGGTACAATTGGTTTATTATGGAAAATGATTTTAGCTTCTGTTGTAATGTTAGTTACAGGTTATTGGGGTGAGGCTGTTGCCCCAGCTCAAGCTACATTATGGGGAACTATAAGTGCTATCGCTTACTTCTACATCGTGTATGAAGTATGGTTAGGAGATGTTAAGAAATTAGCGACTGGTGCTGGTTCTGCAGTAGCTTCTGCAAACAAAGCATTAGGTTGGTTCGTATTAGTT LLTVPLMCVEFYLITKKAGGTIGLLWKMILASVVMLVTGYWGEAVAPAQATLWGTISAIAYFYIVYEVWLGDVKKLATGAGSAVASANKALGWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACTGTGCCTTTAATGTGTGTTGAATTCTATTTAATCACAAAGAAA---------GCA------GGTGGTACAATT---GGTTTA------------------------------------TTATGGAAA---ATGATTTTAGCTTCTGTTGTAATGTTAGTTACAGGTTATTGGGGTGAG---------GCT------------------GTT------GCCCCA------------------------------------------------------------------------------------------------GCTCAAGCT------------------ACATTATGG---GGAACTATAAGTGCTATCGCTTACTTCTACATCGTGTATGAAGTA---------------TGG------TTA---GGAGATGTTAAGAAATTAGCGACTGGT------GCT---GGTTCTGCA---GTA---GCT---TCT---GCA---AAC---AAA---GCATTA---GGTTGGTTCGTATTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLMCVEFYLITKK---A--GGTI-GL------------LWK-MILASVVMLVTGYWGE---A------V--AP--------------------------------AQA------TLW-GTISAIAYFYIVYEV-----W--L-GDVKKLATG--A-GSA-V-A-S-A-N-K-AL-GWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929623 [II-CFB-AAA027E17] PRGD_OTU173_otuREP_4baaa57b5237dbef4f3e1ee2f7e88bfe gb|KJ929623| PRGD_OTU173_otuREP_4baaa57b5237dbef4f3e1ee2f7e88bfe, putative proteorhodopsin gene, partial cds. PRGD_OTU173_otuREP_4baaa57b5237dbef4f3e1ee2f7e88bfe, putative proteorhodopsin gene, partial cds. KJ929623 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683) TTGTTAACTGTGCCTTTGATGTGTGTTGAGTTCTACTTGATCACAAAAAAAGCTGGTGGTACAACAGGTTTATTATGGAAAATGATTTTAGCTTCTGTTGTAATGCTGGTAACAGGTTACGTAGGTGAGGCTGGATTAGGAAGTGCTACTGTATATGGTACAATTAGTGCGCTTGCTTACTTCTACATTGTGTATGAAGTA LLTVPLMCVEFYLITKKAGGTTGLLWKMILASVVMLVTGYVGEAGLGSATVYGTISALAYFYIVYEV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTAACTGTGCCTTTGATGTGTGTTGAGTTCTACTTGATCACAAAAAAA---------GCT------GGTGGTACAACA---GGTTTA------------------------------------TTATGGAAA---ATGATTTTAGCTTCTGTTGTAATGCTGGTAACAGGTTACGTAGGTGAG---------GCT------------------GGA------TTAGGA---------------------------------------------------------------------------------------------------AGTGCT------------------ACTGTATAT---GGTACAATTAGTGCGCTTGCTTACTTCTACATTGTGTATGAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLMCVEFYLITKK---A--GGTT-GL------------LWK-MILASVVMLVTGYVGE---A------G--LG---------------------------------SA------TVY-GTISALAYFYIVYEV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929624 [II-CFB-AAA027E17] PRGD_OTU173_5d15c045c21ede6f15e02f7e2866ad28 gb|KJ929624| PRGD_OTU173_5d15c045c21ede6f15e02f7e2866ad28, putative proteorhodopsin gene, partial cds. PRGD_OTU173_5d15c045c21ede6f15e02f7e2866ad28, putative proteorhodopsin gene, partial cds. KJ929624 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGTTAACTGTGCCTTTGATGTGTGTTGAGTTCTACTTGATCACAAAGAAAGCTGGTGGTACAACAGGTTTATTATGGAAAATGATTTTAGCTTCTGTTGTAATGTTGGTAACAGGTTACATGGGTGAAGCTGGATTAGGAAGTCCTACAGTTTGGGGTACAGTGAGTGCGCTTGCTTACTTCTACATTGTGTATGAAGTA LLTVPLMCVEFYLITKKAGGTTGLLWKMILASVVMLVTGYMGEAGLGSPTVWGTVSALAYFYIVYEV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTAACTGTGCCTTTGATGTGTGTTGAGTTCTACTTGATCACAAAGAAA---------GCT------GGTGGTACAACA---GGTTTA------------------------------------TTATGGAAA---ATGATTTTAGCTTCTGTTGTAATGTTGGTAACAGGTTACATGGGTGAA---------GCT------------------GGA------TTAGGA---------------------------------------------------------------------------------------------------AGTCCT------------------ACAGTTTGG---GGTACAGTGAGTGCGCTTGCTTACTTCTACATTGTGTATGAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLMCVEFYLITKK---A--GGTT-GL------------LWK-MILASVVMLVTGYMGE---A------G--LG---------------------------------SP------TVW-GTVSALAYFYIVYEV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929614 [II-CFB-AAA027E17] PRGD_OTU170_otuREP_e1e0754f951df722fc58f4f2019904d8 gb|KJ929614| PRGD_OTU170_otuREP_e1e0754f951df722fc58f4f2019904d8, putative proteorhodopsin gene, partial cds. PRGD_OTU170_otuREP_e1e0754f951df722fc58f4f2019904d8, putative proteorhodopsin gene, partial cds. KJ929614 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) ATCTTAACTGTACCATTAATGGTAGTTGAGTTTGCTCTACTTACAGGTGTAGGTATGAGAAAACTTTTCTGGGCATCAGTTATTATGCTTGTAACCGGATATTTCGGTGAATCAGGTGTTACTGGAATGTTAGATGCTCAAACTTGGGGTGCTATCTCAGGTGCTGCTTATTTCTACATGGCTTACGAAGTAGGATGTTTCACTGTATTTACAGGAAGCGGTCCTCAAGGTGATGTAGGTACTGCTTTAGCTAACGCTAAAGGTAAAATACCTGCTGCTGGTAGAATGTTACAGTGGTTTGTCTTAGTT ILTVPLMVVEFALLTGVGMRKLFWASVIMLVTGYFGESGVTGMLDAQTWGAISGAAYFYMAYEVGCFTVFTGSGPQGDVGTALANAKGKIPAAGRMLQWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAACTGTACCATTAATGGTAGTTGAGTTTGCTCTACTTACAGGTGTA---------GGT---------------------------------------------------------------ATGAGAAAA---CTTTTCTGGGCATCAGTTATTATGCTTGTAACCGGATATTTCGGTGAA---------TCA------------------GGT------GTTACT------------------------GGAATGTTA------------------------------------------------------------------GATGCT------------------CAAACTTGG---GGTGCTATCTCAGGTGCTGCTTATTTCTACATGGCTTACGAAGTAGGATGTTTCACTGTATTTACAGGAAGC---GGTCCTCAAGGTGATGTAGGTACTGCTTTAGCTAAC---GCTAAAGGTAAAATA---CCT---GCT---GCT---GGT---AGA---ATGTTA---CAGTGGTTTGTCTTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMVVEFALLTGV---G---------------------MRK-LFWASVIMLVTGYFGE---S------G--VT--------GML----------------------DA------QTW-GAISGAAYFYMAYEVGCFTVFTGS-GPQGDVGTALAN-AKGKI-P-A-A-G-R-ML-QWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929615 [II-CFB-AAA027E17] PRGD_OTU170_dc4fc8ba2b5cf49a2dad6b7031407210 gb|KJ929615| PRGD_OTU170_dc4fc8ba2b5cf49a2dad6b7031407210, putative proteorhodopsin gene, partial cds. PRGD_OTU170_dc4fc8ba2b5cf49a2dad6b7031407210, putative proteorhodopsin gene, partial cds. KJ929615 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATCTTAACTGTACCATTGATGGTAGTTGAGTTTGCTTTACTTACTGGTGTAGGTATGAGAAAACTTTTCTGGGCTTCTGTGGTTATGCTTGTCACTGGATATTTCGGTGAATCAGGTGTTACGGGAGTATTAGATGCTCAAACTTGGGGTGCTATCTCAGGTGCTGCATATTTCTACATGGCATACGAAGTAGGATGTTTCACTGTATTTACAGGAAGCGGTCCTCAAGGTGATGTAGGTACTGCTTTAGCTAATGCTAAAGGTAAAATACCTGCTGCTGGTAAGATGCTTCAATGGTTTGTATTAGTT ILTVPLMVVEFALLTGVGMRKLFWASVVMLVTGYFGESGVTGVLDAQTWGAISGAAYFYMAYEVGCFTVFTGSGPQGDVGTALANAKGKIPAAGKMLQWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAACTGTACCATTGATGGTAGTTGAGTTTGCTTTACTTACTGGTGTA---------GGT---------------------------------------------------------------ATGAGAAAA---CTTTTCTGGGCTTCTGTGGTTATGCTTGTCACTGGATATTTCGGTGAA---------TCA------------------GGT------GTTACG------------------------GGAGTATTA------------------------------------------------------------------GATGCT------------------CAAACTTGG---GGTGCTATCTCAGGTGCTGCATATTTCTACATGGCATACGAAGTAGGATGTTTCACTGTATTTACAGGAAGC---GGTCCTCAAGGTGATGTAGGTACTGCTTTAGCTAAT---GCTAAAGGTAAAATA---CCT---GCT---GCT---GGT---AAG---ATGCTT---CAATGGTTTGTATTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMVVEFALLTGV---G---------------------MRK-LFWASVVMLVTGYFGE---S------G--VT--------GVL----------------------DA------QTW-GAISGAAYFYMAYEVGCFTVFTGS-GPQGDVGTALAN-AKGKI-P-A-A-G-K-ML-QWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929616 [II-CFB-AAA027E17] PRGD_OTU170_e254f0d410ba642978ff16235e9a981a gb|KJ929616| PRGD_OTU170_e254f0d410ba642978ff16235e9a981a, putative proteorhodopsin gene, partial cds. PRGD_OTU170_e254f0d410ba642978ff16235e9a981a, putative proteorhodopsin gene, partial cds. KJ929616 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) ATCTTAACTGTACCATTGATGGTAGTTGAGTTTGCTCTACTTACTGGTGTAGGTATGAGAAAACTTTTCTGGGCTTCTGTGGTTATGCTTGTTACTGGATATTTCGGTGAATCAGGTGTTACAGGAGTATTAGATGCTCAAACTTGGGGTGCTATCTCAGGTGCTGCATATTTTTACATGGCATACGAAGTAGGATGTTTTACTGTGTTTACAGGAAGCGGTCCTCAAGGTGATGTGGGTACTGCTTTAGCTAACGCTAAAGGTAAAATACCTGCTGCTGGTAAAATGCTTCAATGGTTTGTATTAGTT ILTVPLMVVEFALLTGVGMRKLFWASVVMLVTGYFGESGVTGVLDAQTWGAISGAAYFYMAYEVGCFTVFTGSGPQGDVGTALANAKGKIPAAGKMLQWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAACTGTACCATTGATGGTAGTTGAGTTTGCTCTACTTACTGGTGTA---------GGT---------------------------------------------------------------ATGAGAAAA---CTTTTCTGGGCTTCTGTGGTTATGCTTGTTACTGGATATTTCGGTGAA---------TCA------------------GGT------GTTACA------------------------GGAGTATTA------------------------------------------------------------------GATGCT------------------CAAACTTGG---GGTGCTATCTCAGGTGCTGCATATTTTTACATGGCATACGAAGTAGGATGTTTTACTGTGTTTACAGGAAGC---GGTCCTCAAGGTGATGTGGGTACTGCTTTAGCTAAC---GCTAAAGGTAAAATA---CCT---GCT---GCT---GGT---AAA---ATGCTT---CAATGGTTTGTATTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMVVEFALLTGV---G---------------------MRK-LFWASVVMLVTGYFGE---S------G--VT--------GVL----------------------DA------QTW-GAISGAAYFYMAYEVGCFTVFTGS-GPQGDVGTALAN-AKGKI-P-A-A-G-K-ML-QWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929876 [II-CFB-AAA027E17] PRGD_OTU327_otuREP_7ac987a12efc64ced9b9bd878bf7c929 gb|KJ929876| PRGD_OTU327_otuREP_7ac987a12efc64ced9b9bd878bf7c929, putative proteorhodopsin gene, partial cds. PRGD_OTU327_otuREP_7ac987a12efc64ced9b9bd878bf7c929, putative proteorhodopsin gene, partial cds. KJ929876 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) ATTCTAACTGTTCCACTAATGGTAGTAGAGTTTTCTCTATTAACTGGTGTGGGAATGGCCAAGCTTTTTTGGCTTTCAGTGGGTATGCTAGTAACTGGATATTTCGGTGAATCTGGAATAACTGGTGTTGGAAATGCTGAAATCTGGGGTCTTGCTTCAGGATTATGTTATTTCTGGATGGCATACGAAGTAGGTGCGCTTAGAGTATTTGGTGGCGGAATGCCATCAGGAGCTGTAGGTGAGGCATTAGCTAGCGCAAAAGGTAAAATCCCTGCTGCTGGTAAAATGTTACAATGGTTTGTACTAGTT ILTVPLMVVEFSLLTGVGMAKLFWLSVGMLVTGYFGESGITGVGNAEIWGLASGLCYFWMAYEVGALRVFGGGMPSGAVGEALASAKGKIPAAGKMLQWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTAACTGTTCCACTAATGGTAGTAGAGTTTTCTCTATTAACTGGTGTG---------GGA---------------------------------------------------------------ATGGCCAAG---CTTTTTTGGCTTTCAGTGGGTATGCTAGTAACTGGATATTTCGGTGAA---------TCT------------------GGA------ATAACT------------------------GGTGTTGGA------------------------------------------------------------------AATGCT------------------GAAATCTGG---GGTCTTGCTTCAGGATTATGTTATTTCTGGATGGCATACGAAGTAGGTGCGCTTAGAGTATTTGGTGGCGGA---ATGCCATCAGGAGCTGTAGGTGAGGCATTAGCTAGC---GCAAAAGGTAAAATC---CCT---GCT---GCT---GGT---AAA---ATGTTA---CAATGGTTTGTACTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMVVEFSLLTGV---G---------------------MAK-LFWLSVGMLVTGYFGE---S------G--IT--------GVG----------------------NA------EIW-GLASGLCYFWMAYEVGALRVFGGG-MPSGAVGEALAS-AKGKI-P-A-A-G-K-ML-QWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929848 [II-CFB-AAA027E17] PRGD_OTU299_otuREP_f6a77a37f494bc101e7d7110e6d37f88 gb|KJ929848| PRGD_OTU299_otuREP_f6a77a37f494bc101e7d7110e6d37f88, putative proteorhodopsin gene, partial cds. PRGD_OTU299_otuREP_f6a77a37f494bc101e7d7110e6d37f88, putative proteorhodopsin gene, partial cds. KJ929848 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) ATACTTACTGTGCCGCTAATGGTGGTAGAGTTTGCTTTGCTAACTGGTGTAGGAATGACAAAGTTATTCTGGTTATCAGTTGTTATGTTAGTTACAGGTTACTTCGGTGAATCTGGTGTTACTGGTGTTTTGAATGCTGAATTGTGGGGGGCTATCTCAGGTGCTGCATATTTTGCAATGGCCTACGAAGTTGGCTGTCTGAGAGTTTTCAGTGACACGGCTCCTTCTGGTGCTGTAGGTGATGCATTAGCTAGCGCTAAAGGCAAAATTCCTTCTGCTGGTAGAATGTTACAGTGGTTTGTATTAGTT ILTVPLMVVEFALLTGVGMTKLFWLSVVMLVTGYFGESGVTGVLNAELWGAISGAAYFAMAYEVGCLRVFSDTAPSGAVGDALASAKGKIPSAGRMLQWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTTACTGTGCCGCTAATGGTGGTAGAGTTTGCTTTGCTAACTGGTGTA---------GGA---------------------------------------------------------------ATGACAAAG---TTATTCTGGTTATCAGTTGTTATGTTAGTTACAGGTTACTTCGGTGAA---------TCT------------------GGT------GTTACT------------------------GGTGTTTTG------------------------------------------------------------------AATGCT------------------GAATTGTGG---GGGGCTATCTCAGGTGCTGCATATTTTGCAATGGCCTACGAAGTTGGCTGTCTGAGAGTTTTCAGTGACACG---GCTCCTTCTGGTGCTGTAGGTGATGCATTAGCTAGC---GCTAAAGGCAAAATT---CCT---TCT---GCT---GGT---AGA---ATGTTA---CAGTGGTTTGTATTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMVVEFALLTGV---G---------------------MTK-LFWLSVVMLVTGYFGE---S------G--VT--------GVL----------------------NA------ELW-GAISGAAYFAMAYEVGCLRVFSDT-APSGAVGDALAS-AKGKI-P-S-A-G-R-ML-QWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929742 [II-CFB-AAA027E17] PRGD_OTU223_otuREP_680344add8694d03a20e184be4919e2d gb|KJ929742| PRGD_OTU223_otuREP_680344add8694d03a20e184be4919e2d, putative proteorhodopsin gene, partial cds. PRGD_OTU223_otuREP_680344add8694d03a20e184be4919e2d, putative proteorhodopsin gene, partial cds. KJ929742 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTTTGACAGTACCTTTAATGGTAGTTGAGTTTGCTCTTTTGACTGGAGTTGGAATGAGAAAATTATTCTGGTTGTCTGTTGGAATGTTAGTAACTGGATATTTTGGCGAATCTGGAATTGTTGGCGGTGAAGCATGGATGTGGGGACTTTTCTCTGGTATTGCATACTTCTGGATGGCTTATGAAGTTGGATGTGCCTCACTATTTGGTGGTCCTTCTGGAGCAGTAGGTAACGCGTTGAACAAAGGTGGTGGAAAGATCGCTGATGGTGGTAGAATGTTACAATGGTTCGTACTTGTT ILTVPLMVVEFALLTGVGMRKLFWLSVGMLVTGYFGESGIVGGEAWMWGLFSGIAYFWMAYEVGCASLFGGPSGAVGNALNKGGGKIADGGRMLQWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTGACAGTACCTTTAATGGTAGTTGAGTTTGCTCTTTTGACTGGAGTT---------GGA---------------------------------------------------------------ATGAGAAAA---TTATTCTGGTTGTCTGTTGGAATGTTAGTAACTGGATATTTTGGCGAA---------TCT------------------GGA------ATTGTT------------------------GGC---GGT------------------------------------------------------------------GAAGCA------------------TGGATGTGG---GGACTTTTCTCTGGTATTGCATACTTCTGGATGGCTTATGAAGTTGGATGTGCCTCACTATTT------GGT---GGTCCTTCTGGAGCAGTAGGTAACGCGTTGAACAAA---GGTGGTGGAAAGATC---GCT---GAT---GGT---GGT---AGA---ATGTTA---CAATGGTTCGTACTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMVVEFALLTGV---G---------------------MRK-LFWLSVGMLVTGYFGE---S------G--IV--------G-G----------------------EA------WMW-GLFSGIAYFWMAYEVGCASLF--G-GPSGAVGNALNK-GGGKI-A-D-G-G-R-ML-QWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929743 [II-CFB-AAA027E17] PRGD_OTU223_f0823c244c373e057d77cff671dc4702 gb|KJ929743| PRGD_OTU223_f0823c244c373e057d77cff671dc4702, putative proteorhodopsin gene, partial cds. PRGD_OTU223_f0823c244c373e057d77cff671dc4702, putative proteorhodopsin gene, partial cds. KJ929743 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTTTGACAGTACCTTTAATGGTAGTTGAGTTTGCTCTTTTAACCGGAGTTGGAATGAGAAAATTATTCTGGTTATCTGTTGTAATGTTAGTTACTGGGTATTTTGGCGAATCAGGTATTGCGGGATGGAATGCTGCAGGCTGGGGAGCTGTTTCTGGTGCTGCATATTTCTGGATGGCGTATGAAGTTGGATGTGCGTCACTATTTGGTGGCCCATCTGGTGCAGTAGGTAATGCATTAAACAAAGGTGGCGGAAAGATTGCAGAAGGTGGTAGAATGCTACAATGGTTCGTACTTGTT ILTVPLMVVEFALLTGVGMRKLFWLSVVMLVTGYFGESGIAGWNAAGWGAVSGAAYFWMAYEVGCASLFGGPSGAVGNALNKGGGKIAEGGRMLQWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTGACAGTACCTTTAATGGTAGTTGAGTTTGCTCTTTTAACCGGAGTT---------GGA---------------------------------------------------------------ATGAGAAAA---TTATTCTGGTTATCTGTTGTAATGTTAGTTACTGGGTATTTTGGCGAA---------TCA------------------GGT------ATTGCG------------------------GGA---TGG------------------------------------------------------------------AATGCT------------------GCAGGCTGG---GGAGCTGTTTCTGGTGCTGCATATTTCTGGATGGCGTATGAAGTTGGATGTGCGTCACTATTT------GGT---GGCCCATCTGGTGCAGTAGGTAATGCATTAAACAAA---GGTGGCGGAAAGATT---GCA---GAA---GGT---GGT---AGA---ATGCTA---CAATGGTTCGTACTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMVVEFALLTGV---G---------------------MRK-LFWLSVVMLVTGYFGE---S------G--IA--------G-W----------------------NA------AGW-GAVSGAAYFWMAYEVGCASLF--G-GPSGAVGNALNK-GGGKI-A-E-G-G-R-ML-QWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929329 [II-CFB-AAA027E17] PRGD_OTU105_998c2e078255f9761e3852b829c0d543 gb|KJ929329| PRGD_OTU105_998c2e078255f9761e3852b829c0d543, putative proteorhodopsin gene, partial cds. PRGD_OTU105_998c2e078255f9761e3852b829c0d543, putative proteorhodopsin gene, partial cds. KJ929329 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.935 18.508 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (72.0542, -130.8781), Mediterranean Sea (33.762, 29.175; 33.935, 18.508) ATTCTTACTGTACCATTAATGGTAGTTGAATTTGCTCTCTTAACAGGTGTAGGAATGAGAAAATTATTCTGGTTATCTGTTGTAATGCTAGTAACTGGATACTTCGGTGAGTCTGGTATAACAGGTGTTGGTAATGCTGCCATTTGGGGTGGTGTTTCTGGTGCTGCTTATTTCTTAATGGCTTATGAAGTTGGTTGTTTCTCTATCTTTGGACTTCCCTCCGGTGCAGTAGGTAATGCTCTTAATAGTGGTTCTGGAAAAATTCCAGAAGCCGGTAGAATGTTACAATGGTTTGTACTTGTT ILTVPLMVVEFALLTGVGMRKLFWLSVVMLVTGYFGESGITGVGNAAIWGGVSGAAYFLMAYEVGCFSIFGLPSGAVGNALNSGSGKIPEAGRMLQWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTACTGTACCATTAATGGTAGTTGAATTTGCTCTCTTAACAGGTGTA---------GGA---------------------------------------------------------------ATGAGAAAA---TTATTCTGGTTATCTGTTGTAATGCTAGTAACTGGATACTTCGGTGAG---------TCT------------------GGT------ATAACA------------------------GGTGTTGGT------------------------------------------------------------------AATGCT------------------GCCATTTGG---GGTGGTGTTTCTGGTGCTGCTTATTTCTTAATGGCTTATGAAGTTGGTTGTTTCTCTATCTTT------GGA---CTTCCCTCCGGTGCAGTAGGTAATGCTCTTAATAGT---GGTTCTGGAAAAATT---CCA---GAA---GCC---GGT---AGA---ATGTTA---CAATGGTTTGTACTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMVVEFALLTGV---G---------------------MRK-LFWLSVVMLVTGYFGE---S------G--IT--------GVG----------------------NA------AIW-GGVSGAAYFLMAYEVGCFSIF--G-LPSGAVGNALNS-GSGKI-P-E-A-G-R-ML-QWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929330 [II-CFB-AAA027E17] PRGD_OTU105_add0f4bbbda7d34f7e87f4c2d618e235 gb|KJ929330| PRGD_OTU105_add0f4bbbda7d34f7e87f4c2d618e235, putative proteorhodopsin gene, partial cds. PRGD_OTU105_add0f4bbbda7d34f7e87f4c2d618e235, putative proteorhodopsin gene, partial cds. KJ929330 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) ATTCTTACTGTTCCTTTAATGGTAGTTGAGTTTGCTCTTTTAACAGGTGTAGGAATGAGAAAATTATTCTGGGCATCAGTTGTAATGTTAGTAACCGGTTATTTTGGTGAGTCAGGCGTAACAGAAATAGGTAATGCTGCTATTTGGGGTGGTATTTCTGGTGCTGCTTACTTCTGGATGGCTTATGAAGTTGGGTGTTTATCCATCTTTGGCGGTCCTTCAGGTGCTGTAGGTAAAGCTTTATCCAGTGGTTCTGGGAAAATTCCAGAAGCTGGAAGAATGTTACAGTGGTTCGTATTAGTA ILTVPLMVVEFALLTGVGMRKLFWASVVMLVTGYFGESGVTEIGNAAIWGGISGAAYFWMAYEVGCLSIFGGPSGAVGKALSSGSGKIPEAGRMLQWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTACTGTTCCTTTAATGGTAGTTGAGTTTGCTCTTTTAACAGGTGTA---------GGA---------------------------------------------------------------ATGAGAAAA---TTATTCTGGGCATCAGTTGTAATGTTAGTAACCGGTTATTTTGGTGAG---------TCA------------------GGC------GTAACA------------------------GAAATAGGT------------------------------------------------------------------AATGCT------------------GCTATTTGG---GGTGGTATTTCTGGTGCTGCTTACTTCTGGATGGCTTATGAAGTTGGGTGTTTATCCATCTTT------GGC---GGTCCTTCAGGTGCTGTAGGTAAAGCTTTATCCAGT---GGTTCTGGGAAAATT---CCA---GAA---GCT---GGA---AGA---ATGTTA---CAGTGGTTCGTATTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMVVEFALLTGV---G---------------------MRK-LFWASVVMLVTGYFGE---S------G--VT--------EIG----------------------NA------AIW-GGISGAAYFWMAYEVGCLSIF--G-GPSGAVGKALSS-GSGKI-P-E-A-G-R-ML-QWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929331 [II-CFB-AAA027E17] PRGD_OTU105_ccebe4d3d668c57794265eada29843cf gb|KJ929331| PRGD_OTU105_ccebe4d3d668c57794265eada29843cf, putative proteorhodopsin gene, partial cds. PRGD_OTU105_ccebe4d3d668c57794265eada29843cf, putative proteorhodopsin gene, partial cds. KJ929331 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) ATTCTTACTGTACCATTAATGGTAGTTGAATTTGCTCTCTTAACAGGTGTAGGAATGAGAAAATTATTCTGGGCATCAGTTGTAATGTTAGTAACTGGTTACTTCGGTGAATCAGGTGTAACTGGAGTATTAGACGCTCAAACTTGGGGTGCTATCTCTGGTGTTGCTTACTTCTGGATGGCTTATGAAGTTGGATGTTTATCTATCTTCGGTGGTCCTTCAGGTGCAGTAGGTAATGCTCTTACTAGTGGTTCTGGAAAAATTCCAGAAGCTGGTAGAATGTTACAATGGTTTGTACTTGTT ILTVPLMVVEFALLTGVGMRKLFWASVVMLVTGYFGESGVTGVLDAQTWGAISGVAYFWMAYEVGCLSIFGGPSGAVGNALTSGSGKIPEAGRMLQWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTACTGTACCATTAATGGTAGTTGAATTTGCTCTCTTAACAGGTGTA---------GGA---------------------------------------------------------------ATGAGAAAA---TTATTCTGGGCATCAGTTGTAATGTTAGTAACTGGTTACTTCGGTGAA---------TCA------------------GGT------GTAACT------------------------GGAGTATTA------------------------------------------------------------------GACGCT------------------CAAACTTGG---GGTGCTATCTCTGGTGTTGCTTACTTCTGGATGGCTTATGAAGTTGGATGTTTATCTATCTTC------GGT---GGTCCTTCAGGTGCAGTAGGTAATGCTCTTACTAGT---GGTTCTGGAAAAATT---CCA---GAA---GCT---GGT---AGA---ATGTTA---CAATGGTTTGTACTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMVVEFALLTGV---G---------------------MRK-LFWASVVMLVTGYFGE---S------G--VT--------GVL----------------------DA------QTW-GAISGVAYFWMAYEVGCLSIF--G-GPSGAVGNALTS-GSGKI-P-E-A-G-R-ML-QWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929326 [II-CFB-AAA027E17] PRGD_OTU105_otuREP_d910ade424c40564e4e5bc2482ef10d8 gb|KJ929326| PRGD_OTU105_otuREP_d910ade424c40564e4e5bc2482ef10d8, putative proteorhodopsin gene, partial cds. PRGD_OTU105_otuREP_d910ade424c40564e4e5bc2482ef10d8, putative proteorhodopsin gene, partial cds. KJ929326 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) ATTCTTACTGTACCATTAATGGTAGTTGAATTTGCTCTCTTAACAGGTGTAGGAATGAGAAAATTATTCTGGGCATCAGTTATAATGTTAGTAACTGGTTACTTCGGTGAATCAGGTGTAACAGGAATGTTAGACGCTCAAACTTGGGGTGCTATCTCAGGTCTTGCTTACTTCTGGATGGCTTATGAAGTTGGATGTTTATCTATCTTCGGAGGTCCTTCTGGTGCAGTAGGTAATGCACTTACTAGTGGTTCTGGAAAAATTCCAGAAGCTGGTAGAATGTTACAATGGTTTGTACTTGTT ILTVPLMVVEFALLTGVGMRKLFWASVIMLVTGYFGESGVTGMLDAQTWGAISGLAYFWMAYEVGCLSIFGGPSGAVGNALTSGSGKIPEAGRMLQWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTACTGTACCATTAATGGTAGTTGAATTTGCTCTCTTAACAGGTGTA---------GGA---------------------------------------------------------------ATGAGAAAA---TTATTCTGGGCATCAGTTATAATGTTAGTAACTGGTTACTTCGGTGAA---------TCA------------------GGT------GTAACA------------------------GGAATGTTA------------------------------------------------------------------GACGCT------------------CAAACTTGG---GGTGCTATCTCAGGTCTTGCTTACTTCTGGATGGCTTATGAAGTTGGATGTTTATCTATCTTC------GGA---GGTCCTTCTGGTGCAGTAGGTAATGCACTTACTAGT---GGTTCTGGAAAAATT---CCA---GAA---GCT---GGT---AGA---ATGTTA---CAATGGTTTGTACTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMVVEFALLTGV---G---------------------MRK-LFWASVIMLVTGYFGE---S------G--VT--------GML----------------------DA------QTW-GAISGLAYFWMAYEVGCLSIF--G-GPSGAVGNALTS-GSGKI-P-E-A-G-R-ML-QWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929327 [II-CFB-AAA027E17] PRGD_OTU105_1fe9be8760faac0ca16a8e907c59bc12 gb|KJ929327| PRGD_OTU105_1fe9be8760faac0ca16a8e907c59bc12, putative proteorhodopsin gene, partial cds. PRGD_OTU105_1fe9be8760faac0ca16a8e907c59bc12, putative proteorhodopsin gene, partial cds. KJ929327 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) ATTCTTACTGTACCATTAATGGTAGTTGAGTTTGCTCTCTTAACAGGTGTAGGAATGAGAAAATTATTCTGGGCATCAGTTATTATGTTAGTAACTGGTTATTTCGGTGAGTCAGGCGTAACTGGAGTTTTAGACGCTCAAACATGGGGTGCTATCTCTGGTCTTGCTTACTTCTGGATGGCTTATGAAGTTGGATGTTTATCTATCTTCGGTGGTCCTTCAGGTGCTGTAGGTAATGCTCTTACTAGTGGTTCTGGAAAAATTCCAGAAGCTGGTAGAATGTTACAATGGTTTGTACTTGTT ILTVPLMVVEFALLTGVGMRKLFWASVIMLVTGYFGESGVTGVLDAQTWGAISGLAYFWMAYEVGCLSIFGGPSGAVGNALTSGSGKIPEAGRMLQWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTACTGTACCATTAATGGTAGTTGAGTTTGCTCTCTTAACAGGTGTA---------GGA---------------------------------------------------------------ATGAGAAAA---TTATTCTGGGCATCAGTTATTATGTTAGTAACTGGTTATTTCGGTGAG---------TCA------------------GGC------GTAACT------------------------GGAGTTTTA------------------------------------------------------------------GACGCT------------------CAAACATGG---GGTGCTATCTCTGGTCTTGCTTACTTCTGGATGGCTTATGAAGTTGGATGTTTATCTATCTTC------GGT---GGTCCTTCAGGTGCTGTAGGTAATGCTCTTACTAGT---GGTTCTGGAAAAATT---CCA---GAA---GCT---GGT---AGA---ATGTTA---CAATGGTTTGTACTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMVVEFALLTGV---G---------------------MRK-LFWASVIMLVTGYFGE---S------G--VT--------GVL----------------------DA------QTW-GAISGLAYFWMAYEVGCLSIF--G-GPSGAVGNALTS-GSGKI-P-E-A-G-R-ML-QWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929328 [II-CFB-AAA027E17] PRGD_OTU105_5b3e10e2664f3ee4f127f50423c53c34 gb|KJ929328| PRGD_OTU105_5b3e10e2664f3ee4f127f50423c53c34, putative proteorhodopsin gene, partial cds. PRGD_OTU105_5b3e10e2664f3ee4f127f50423c53c34, putative proteorhodopsin gene, partial cds. KJ929328 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-33.28, 45.35) ATTCTTACAGTACCATTAATGGTTGTAGAATTCGCTCTCCTAACAGGAGTTGGAATGAGAAAATTATTCTGGGCTTCAGTTATCATGCTAGTAGCTGGTTATTTCGGAGAAGCTGATGGAGTTATGGACATGCTAGACGCTCAAACTTGGGGTGCTATTTCTGGTATTGCATACTTCTGGATGGCTTATGAAGTTGGATGTCTTACTATTTTTGGAGGACCTTCAGGTGCCACTGGAAAAGCTCTTAATTCTGGATCAGGTAAAATAGCCGGAGCAGGTAGAATGCTACAATGGTTCGTTCTTGTT ILTVPLMVVEFALLTGVGMRKLFWASVIMLVAGYFGEADGVMDMLDAQTWGAISGIAYFWMAYEVGCLTIFGGPSGATGKALNSGSGKIAGAGRMLQWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTACAGTACCATTAATGGTTGTAGAATTCGCTCTCCTAACAGGAGTT---------GGA---------------------------------------------------------------ATGAGAAAA---TTATTCTGGGCTTCAGTTATCATGCTAGTAGCTGGTTATTTCGGAGAA---------GCT---------------GATGGA------GTTATG------------------------GACATGCTA------------------------------------------------------------------GACGCT------------------CAAACTTGG---GGTGCTATTTCTGGTATTGCATACTTCTGGATGGCTTATGAAGTTGGATGTCTTACTATTTTT------GGA---GGACCTTCAGGTGCCACTGGAAAAGCTCTTAATTCT---GGATCAGGTAAAATA---GCC---GGA---GCA---GGT---AGA---ATGCTA---CAATGGTTCGTTCTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMVVEFALLTGV---G---------------------MRK-LFWASVIMLVAGYFGE---A-----DG--VM--------DML----------------------DA------QTW-GAISGIAYFWMAYEVGCLTIF--G-GPSGATGKALNS-GSGKI-A-G-A-G-R-ML-QWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929882 [II-CFB-AAA027E17] PRGD_OTU333_otuREP_f3fe765dffd8767146e1b5ad20b545a9 gb|KJ929882| PRGD_OTU333_otuREP_f3fe765dffd8767146e1b5ad20b545a9, putative proteorhodopsin gene, partial cds. PRGD_OTU333_otuREP_f3fe765dffd8767146e1b5ad20b545a9, putative proteorhodopsin gene, partial cds. KJ929882 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) ATTCTTACTGTACCATTAATGGTTGTTGAATTTGCTCTTTTAACGGGTGTTGGAATGAGAAAATTATTCTGGGCATCTGTAATAATGTTAGTTACTGGTTACTTCGGTGAATCTGGAGTAATGGGTGGAACTGCAACTATGTGGGGTACTGCCTCAGCACTTGCATACTTCTACATGGCTTATGAAGTTGGTTGTTTAACCATTTTTGGTGGACCAACAGGAGATGTGGGAACTGCATTAAACAGCGCATCTGGTAAAATACCTTCGGCTGGTAGAATGTTACAATGGTTTGTTCTTGTA ILTVPLMVVEFALLTGVGMRKLFWASVIMLVTGYFGESGVMGGTATMWGTASALAYFYMAYEVGCLTIFGGPTGDVGTALNSASGKIPSAGRMLQWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTACTGTACCATTAATGGTTGTTGAATTTGCTCTTTTAACGGGTGTT---------GGA---------------------------------------------------------------ATGAGAAAA---TTATTCTGGGCATCTGTAATAATGTTAGTTACTGGTTACTTCGGTGAA---------TCT------------------GGA------GTAATG------------------------GGT---GGA------------------------------------------------------------------ACTGCA------------------ACTATGTGG---GGTACTGCCTCAGCACTTGCATACTTCTACATGGCTTATGAAGTTGGTTGTTTAACCATTTTT------GGT---GGACCAACAGGAGATGTGGGAACTGCATTAAACAGC---GCATCTGGTAAAATA---CCT---TCG---GCT---GGT---AGA---ATGTTA---CAATGGTTTGTTCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMVVEFALLTGV---G---------------------MRK-LFWASVIMLVTGYFGE---S------G--VM--------G-G----------------------TA------TMW-GTASALAYFYMAYEVGCLTIF--G-GPTGDVGTALNS-ASGKI-P-S-A-G-R-ML-QWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929519 [II-CFB-AAA027E17] PRGD_OTU143_2f2646f5f2f161e04202a8629c0c0c80 gb|KJ929519| PRGD_OTU143_2f2646f5f2f161e04202a8629c0c0c80, putative proteorhodopsin gene, partial cds. PRGD_OTU143_2f2646f5f2f161e04202a8629c0c0c80, putative proteorhodopsin gene, partial cds. KJ929519 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTTTAACCGTTCCACTCATGTGCGTTGAGTTCTATTTGATAACTAAAAAATCAGGTGGTACAATTGGCACTATGTGGAAACTCATCGGTGCTTCTGTAGTGATGTTAGTTACAGGGTATTTTGGTGAAGGTATATACAGAGAGCAAGCTCAAGTTTGGGGTCTTGTTTCTGGGCTTGCTTACTTCTACATCGCATACCTAGTTTGGTTTGGTGAGGTTGCAGAATGTGCTAAGTCAGCTGGTGGAGCCGTGGCTAAAGCTAACAGCGCTCTAGCCAAATTCGTATTAATC ILTVPLMCVEFYLITKKSGGTIGTMWKLIGASVVMLVTGYFGEGIYREQAQVWGLVSGLAYFYIAYLVWFGEVAECAKSAGGAVAKANSALAKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACCGTTCCACTCATGTGCGTTGAGTTCTATTTGATAACTAAAAAA---------TCA------GGTGGTACAATT---GGCACT------------------------------------ATGTGGAAA---CTCATCGGTGCTTCTGTAGTGATGTTAGTTACAGGGTATTTTGGTGAA---------GGT------------------ATA------TACAGA------------------------------------------------------------------------------------------------GAGCAAGCT------------------CAAGTTTGG---GGTCTTGTTTCTGGGCTTGCTTACTTCTACATCGCATACCTAGTT---------------TGG------TTT---GGTGAGGTTGCAGAATGTGCTAAGTCA------GCT---GGTGGAGCC---GTG---GCT---AAA---GCT---AAC---AGC---GCTCTA---GCCAAATTCGTATTAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLITKK---S--GGTI-GT------------MWK-LIGASVVMLVTGYFGE---G------I--YR--------------------------------EQA------QVW-GLVSGLAYFYIAYLV-----W--F-GEVAECAKS--A-GGA-V-A-K-A-N-S-AL-AKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929521 [II-CFB-AAA027E17] PRGD_OTU143_c6b1d12223c48705c35e1ab13afebf2e gb|KJ929521| PRGD_OTU143_c6b1d12223c48705c35e1ab13afebf2e, putative proteorhodopsin gene, partial cds. PRGD_OTU143_c6b1d12223c48705c35e1ab13afebf2e, putative proteorhodopsin gene, partial cds. KJ929521 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) ATTTTAACCGTTCCACTCATGTGCGTTGAGTTCTATTTGATAACTAAAAAATCAGGTGGCACAATTGGCACTATGTGGAAACTCATCGGTGCTTCTGTAGTGATGTTAGTTACAGGGTATTTTGGTGAAGGTATATACAGAGAGCAAGCTCAAGTTTGGGGTCTTGTTTCTGGACTTGCTTACTTCTACATCGCATACCTAGTTTGGTTTGGTGAGGTTGCAGAATGTGCTAAGTCAGCTGGTGGAGCCGTGGCTAAAGCTAACAGCGCTCTAGCCAAATTCGTATTAATC ILTVPLMCVEFYLITKKSGGTIGTMWKLIGASVVMLVTGYFGEGIYREQAQVWGLVSGLAYFYIAYLVWFGEVAECAKSAGGAVAKANSALAKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACCGTTCCACTCATGTGCGTTGAGTTCTATTTGATAACTAAAAAA---------TCA------GGTGGCACAATT---GGCACT------------------------------------ATGTGGAAA---CTCATCGGTGCTTCTGTAGTGATGTTAGTTACAGGGTATTTTGGTGAA---------GGT------------------ATA------TACAGA------------------------------------------------------------------------------------------------GAGCAAGCT------------------CAAGTTTGG---GGTCTTGTTTCTGGACTTGCTTACTTCTACATCGCATACCTAGTT---------------TGG------TTT---GGTGAGGTTGCAGAATGTGCTAAGTCA------GCT---GGTGGAGCC---GTG---GCT---AAA---GCT---AAC---AGC---GCTCTA---GCCAAATTCGTATTAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLITKK---S--GGTI-GT------------MWK-LIGASVVMLVTGYFGE---G------I--YR--------------------------------EQA------QVW-GLVSGLAYFYIAYLV-----W--F-GEVAECAKS--A-GGA-V-A-K-A-N-S-AL-AKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929520 [II-CFB-AAA027E17] PRGD_OTU143_a7b5c5de4603a94ffbd8c0558f7c95e3 gb|KJ929520| PRGD_OTU143_a7b5c5de4603a94ffbd8c0558f7c95e3, putative proteorhodopsin gene, partial cds. PRGD_OTU143_a7b5c5de4603a94ffbd8c0558f7c95e3, putative proteorhodopsin gene, partial cds. KJ929520 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683) ATTCTAACTGTTCCTCTCATGTGTGTTGAGTTCTATTTAATCACTAAAAAATCAGGTGGTACAATCGGAACTATGTGGAAACTCATCGGTGCTTCTGTAGTTATGTTAATTACAGGGTATTTAGGTGAAGGTATATACAGAGAGCAAGCTCAAATTTGGGGTCTTGTTTCTGGACTTGCTTACTTCTACATCGTATACCTAGTTTGGTTCGGTGAGGTTGCCGAATGTGCTAAGTCAGCCGGTGGAGCCGTAGCTAAAGCTAACAGTGCTCTAGCCAAATTCGTATTAATC ILTVPLMCVEFYLITKKSGGTIGTMWKLIGASVVMLITGYLGEGIYREQAQIWGLVSGLAYFYIVYLVWFGEVAECAKSAGGAVAKANSALAKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTAACTGTTCCTCTCATGTGTGTTGAGTTCTATTTAATCACTAAAAAA---------TCA------GGTGGTACAATC---GGAACT------------------------------------ATGTGGAAA---CTCATCGGTGCTTCTGTAGTTATGTTAATTACAGGGTATTTAGGTGAA---------GGT------------------ATA------TACAGA------------------------------------------------------------------------------------------------GAGCAAGCT------------------CAAATTTGG---GGTCTTGTTTCTGGACTTGCTTACTTCTACATCGTATACCTAGTT---------------TGG------TTC---GGTGAGGTTGCCGAATGTGCTAAGTCA------GCC---GGTGGAGCC---GTA---GCT---AAA---GCT---AAC---AGT---GCTCTA---GCCAAATTCGTATTAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLITKK---S--GGTI-GT------------MWK-LIGASVVMLITGYLGE---G------I--YR--------------------------------EQA------QIW-GLVSGLAYFYIVYLV-----W--F-GEVAECAKS--A-GGA-V-A-K-A-N-S-AL-AKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929518 [II-CFB-AAA027E17] PRGD_OTU143_otuREP_d5d954e41cea1301e4dcaf67a0c22d0b gb|KJ929518| PRGD_OTU143_otuREP_d5d954e41cea1301e4dcaf67a0c22d0b, putative proteorhodopsin gene, partial cds. PRGD_OTU143_otuREP_d5d954e41cea1301e4dcaf67a0c22d0b, putative proteorhodopsin gene, partial cds. KJ929518 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (73.9992, 19.2097), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683) ATTCTAACTGTTCCACTCATGTGTGTTGAGTTCTATTTAATCACTAAAAAATCAGGTGGTACAATCGGAACTATGTGGAAACTCATCGGTGCTTCTGTAGTGATGTTAGTTACAGGATATTTTGGTGAAGGTATATACAGAGAGCAGGCACAAATTTGGGGTCTTGTTTCTGGACTTGCTTACTTCTACATCGTGTACCTAGTTTGGTTCGGTGAGGTTGCCGAATGTGCTAAGTCAGCCGGTGGAGCCGTAGCTAAAGCTAACAGTGCTCTAGCCAAATTTGTATTAATC ILTVPLMCVEFYLITKKSGGTIGTMWKLIGASVVMLVTGYFGEGIYREQAQIWGLVSGLAYFYIVYLVWFGEVAECAKSAGGAVAKANSALAKFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTAACTGTTCCACTCATGTGTGTTGAGTTCTATTTAATCACTAAAAAA---------TCA------GGTGGTACAATC---GGAACT------------------------------------ATGTGGAAA---CTCATCGGTGCTTCTGTAGTGATGTTAGTTACAGGATATTTTGGTGAA---------GGT------------------ATA------TACAGA------------------------------------------------------------------------------------------------GAGCAGGCA------------------CAAATTTGG---GGTCTTGTTTCTGGACTTGCTTACTTCTACATCGTGTACCTAGTT---------------TGG------TTC---GGTGAGGTTGCCGAATGTGCTAAGTCA------GCC---GGTGGAGCC---GTA---GCT---AAA---GCT---AAC---AGT---GCTCTA---GCCAAATTTGTATTAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLITKK---S--GGTI-GT------------MWK-LIGASVVMLVTGYFGE---G------I--YR--------------------------------EQA------QIW-GLVSGLAYFYIVYLV-----W--F-GEVAECAKS--A-GGA-V-A-K-A-N-S-AL-AKFVLI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929620 [II-CFB-AAA027E17] PRGD_OTU172_otuREP_a690a82b72c84bc8770c656c1f59c521 gb|KJ929620| PRGD_OTU172_otuREP_a690a82b72c84bc8770c656c1f59c521, putative proteorhodopsin gene, partial cds. PRGD_OTU172_otuREP_a690a82b72c84bc8770c656c1f59c521, putative proteorhodopsin gene, partial cds. KJ929620 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45) ATTCTTACTGTTCCATTAATGTGTGTTGAGTTTTACTTAATCACAAAGAAGGCTGGTGGACAAATCAGCACGATGTGGAAACTCATCTTTGCTTCTGTAGTAATGCTTGTAACAGGGTACATCGGGGAAGGTATCTTCCGTGAGGACGCTTGGTTATGGGGTCTTATCTCAGGTATCGCATACTTCTACATCGTTTACCTAGTATGGTTCGGTGAAGTTGCTGAGCTTGCTGGTAATGCTGGAGGTGCAGTTCAAAAGGCAAACAAAGTCTTAGGATGGTTTGTACTTGTT ILTVPLMCVEFYLITKKAGGQISTMWKLIFASVVMLVTGYIGEGIFREDAWLWGLISGIAYFYIVYLVWFGEVAELAGNAGGAVQKANKVLGWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTACTGTTCCATTAATGTGTGTTGAGTTTTACTTAATCACAAAGAAG---------GCT------GGTGGACAAATC---AGCACG------------------------------------ATGTGGAAA---CTCATCTTTGCTTCTGTAGTAATGCTTGTAACAGGGTACATCGGGGAA---------GGT------------------ATC------TTC---------------------------------------------------------------------CGT---------------------------GAGGACGCT------------------TGGTTATGG---GGTCTTATCTCAGGTATCGCATACTTCTACATCGTTTACCTAGTA---------------TGG------TTC---GGTGAAGTTGCTGAGCTTGCTGGTAAT------GCT---GGAGGTGCA---GTT---CAA---AAG---GCA---AAC---AAA---GTCTTA---GGATGGTTTGTACTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLITKK---A--GGQI-ST------------MWK-LIFASVVMLVTGYIGE---G------I--F-----------------------R---------EDA------WLW-GLISGIAYFYIVYLV-----W--F-GEVAELAGN--A-GGA-V-Q-K-A-N-K-VL-GWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929622 [II-CFB-AAA027E17] PRGD_OTU172_ed4a938b86c37fb484754772d5a2fed3 gb|KJ929622| PRGD_OTU172_ed4a938b86c37fb484754772d5a2fed3, putative proteorhodopsin gene, partial cds. PRGD_OTU172_ed4a938b86c37fb484754772d5a2fed3, putative proteorhodopsin gene, partial cds. KJ929622 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419) ATTCTTACTGTTCCATTAATGTGTGTTGAGTTTTACTTAATCACAAAGAAAGCTGGTGGACAAATCAGCACGATGTGGAAACTCATCTTTGCTTCTGTAGTAATGCTTGTAACAGGTTATATTGGGGAAGGTATCTTCCGTGAGGACGCTTGGTTATGGGGTCTTATCTCAGGTATCGCATACTTCTACATCGTTTACCTAGTATGGTTCGGTGAAGTTGCTGAGCTTGCTGGTAATGCTGGAGGTGCAGTTCAAAAGGCAAACAAAGTCTTAGGATGGTTTGTACTTGTT ILTVPLMCVEFYLITKKAGGQISTMWKLIFASVVMLVTGYIGEGIFREDAWLWGLISGIAYFYIVYLVWFGEVAELAGNAGGAVQKANKVLGWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTACTGTTCCATTAATGTGTGTTGAGTTTTACTTAATCACAAAGAAA---------GCT------GGTGGACAAATC---AGCACG------------------------------------ATGTGGAAA---CTCATCTTTGCTTCTGTAGTAATGCTTGTAACAGGTTATATTGGGGAA---------GGT------------------ATC------TTC---------------------------------------------------------------------CGT---------------------------GAGGACGCT------------------TGGTTATGG---GGTCTTATCTCAGGTATCGCATACTTCTACATCGTTTACCTAGTA---------------TGG------TTC---GGTGAAGTTGCTGAGCTTGCTGGTAAT------GCT---GGAGGTGCA---GTT---CAA---AAG---GCA---AAC---AAA---GTCTTA---GGATGGTTTGTACTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLITKK---A--GGQI-ST------------MWK-LIFASVVMLVTGYIGE---G------I--F-----------------------R---------EDA------WLW-GLISGIAYFYIVYLV-----W--F-GEVAELAGN--A-GGA-V-Q-K-A-N-K-VL-GWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929621 [II-CFB-AAA027E17] PRGD_OTU172_613d499b9a287a63064e36cbd51b7398 gb|KJ929621| PRGD_OTU172_613d499b9a287a63064e36cbd51b7398, putative proteorhodopsin gene, partial cds. PRGD_OTU172_613d499b9a287a63064e36cbd51b7398, putative proteorhodopsin gene, partial cds. KJ929621 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTCTTACTGTTCCATTAATGTGTGTTGAGTTTTACTTGATCACAAAGAAAGCTGGTGGACAAATCAGCACGATGTGGAAACTCATCTTTGCTTCTGTAGTAATGCTTGTAACAGGGTACATCGGGGAAGGTATCTTCCGTGAGGACGCTTGGTTATGGGGTCTTATCTCAGGTATCGCATACTTCTACATCGTTTACCTAGTATGGTTCGGTGAAGTTGCTGAACTTGCAGGTAATGCTGGAGGTGCCGTTCAAAAAGCAAACAAAGTCTTAGGATGGTTTGTACTTGTT ILTVPLMCVEFYLITKKAGGQISTMWKLIFASVVMLVTGYIGEGIFREDAWLWGLISGIAYFYIVYLVWFGEVAELAGNAGGAVQKANKVLGWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTACTGTTCCATTAATGTGTGTTGAGTTTTACTTGATCACAAAGAAA---------GCT------GGTGGACAAATC---AGCACG------------------------------------ATGTGGAAA---CTCATCTTTGCTTCTGTAGTAATGCTTGTAACAGGGTACATCGGGGAA---------GGT------------------ATC------TTC---------------------------------------------------------------------CGT---------------------------GAGGACGCT------------------TGGTTATGG---GGTCTTATCTCAGGTATCGCATACTTCTACATCGTTTACCTAGTA---------------TGG------TTC---GGTGAAGTTGCTGAACTTGCAGGTAAT------GCT---GGAGGTGCC---GTT---CAA---AAA---GCA---AAC---AAA---GTCTTA---GGATGGTTTGTACTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLITKK---A--GGQI-ST------------MWK-LIFASVVMLVTGYIGE---G------I--F-----------------------R---------EDA------WLW-GLISGIAYFYIVYLV-----W--F-GEVAELAGN--A-GGA-V-Q-K-A-N-K-VL-GWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929462 [II-CFB-AAA027E17] PRGD_OTU130_otuREP_5aac95546a9eef63e135b7f0bd35260d gb|KJ929462| PRGD_OTU130_otuREP_5aac95546a9eef63e135b7f0bd35260d, putative proteorhodopsin gene, partial cds. PRGD_OTU130_otuREP_5aac95546a9eef63e135b7f0bd35260d, putative proteorhodopsin gene, partial cds. KJ929462 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) ACCTTAACTGTTCCACTTATGTGTGTTGAGTTCTATTTGATCACCAAGAAAGCTGGTGGTACGAAGTCAATCTTGTACAAACTGATCTTAGCTTCAGTTGCGATGTTAGTTACCGGTTACATCGGTGAGGCATTCTACGCAAACGATGCTGTTTCATGGGTTTGGGGTGCTATTTCTGGTGCTGCTTACTTCTACATCGTATGGATGGTATGGAAAGGAGACGTTGCGAAATTGGCAAACAACGCTGGTGGTGCAGTAGCAAAAGCAAACGGAGCTTTGGCTAAATTTGTTATCATC TLTVPLMCVEFYLITKKAGGTKSILYKLILASVAMLVTGYIGEAFYANDAVSWVWGAISGAAYFYIVWMVWKGDVAKLANNAGGAVAKANGALAKFVII ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCTTAACTGTTCCACTTATGTGTGTTGAGTTCTATTTGATCACCAAGAAA---------GCT------GGTGGTACGAAG---TCAATC------------------------------------TTGTACAAA---CTGATCTTAGCTTCAGTTGCGATGTTAGTTACCGGTTACATCGGTGAG---------GCA------------------TTC------TACGCA------------------------------------------------------AAC---------GAT---------------------------GCTGTTTCA------------------TGGGTTTGG---GGTGCTATTTCTGGTGCTGCTTACTTCTACATCGTATGGATGGTA---------------TGG------AAA---GGAGACGTTGCGAAATTGGCAAACAAC------GCT---GGTGGTGCA---GTA---GCA---AAA---GCA---AAC---GGA---GCTTTG---GCTAAATTTGTTATCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLITKK---A--GGTK-SI------------LYK-LILASVAMLVTGYIGE---A------F--YA------------------N---D---------AVS------WVW-GAISGAAYFYIVWMV-----W--K-GDVAKLANN--A-GGA-V-A-K-A-N-G-AL-AKFVII-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929465 [II-CFB-AAA027E17] PRGD_OTU130_b44d636b3a37e487a97c7ebd01718d69 gb|KJ929465| PRGD_OTU130_b44d636b3a37e487a97c7ebd01718d69, putative proteorhodopsin gene, partial cds. PRGD_OTU130_b44d636b3a37e487a97c7ebd01718d69, putative proteorhodopsin gene, partial cds. KJ929465 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ACCTTAACTGTTCCACTTATGTGTGTTGAGTTCTATTTAATCACCAAGAAAGCTGGTGGCACGAAGTCAATCTTATACAAACTGATCTTAGCTTCAGTTGCGATGTTAGTTACCGGTTACATCGGTGAGGCATTCTACGCAAACGATGCTGTTTCATGGGTTTGGGGTGCTATTTCTGGTGCTGCTTACTTCTACATCGTATGGATGGTATGGAAAGGAGACGTTGCTAAATTGGCAAACAACGCTGGTGGTGCAGTAGCAAAAGCAAACGGAGCTTTGGCTAAATTTGTTATCATC TLTVPLMCVEFYLITKKAGGTKSILYKLILASVAMLVTGYIGEAFYANDAVSWVWGAISGAAYFYIVWMVWKGDVAKLANNAGGAVAKANGALAKFVII ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCTTAACTGTTCCACTTATGTGTGTTGAGTTCTATTTAATCACCAAGAAA---------GCT------GGTGGCACGAAG---TCAATC------------------------------------TTATACAAA---CTGATCTTAGCTTCAGTTGCGATGTTAGTTACCGGTTACATCGGTGAG---------GCA------------------TTC------TACGCA------------------------------------------------------AAC---------GAT---------------------------GCTGTTTCA------------------TGGGTTTGG---GGTGCTATTTCTGGTGCTGCTTACTTCTACATCGTATGGATGGTA---------------TGG------AAA---GGAGACGTTGCTAAATTGGCAAACAAC------GCT---GGTGGTGCA---GTA---GCA---AAA---GCA---AAC---GGA---GCTTTG---GCTAAATTTGTTATCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLITKK---A--GGTK-SI------------LYK-LILASVAMLVTGYIGE---A------F--YA------------------N---D---------AVS------WVW-GAISGAAYFYIVWMV-----W--K-GDVAKLANN--A-GGA-V-A-K-A-N-G-AL-AKFVII-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929463 [II-CFB-AAA027E17] PRGD_OTU130_00ec5d5426f93dd4f4d561c379ef0e27 gb|KJ929463| PRGD_OTU130_00ec5d5426f93dd4f4d561c379ef0e27, putative proteorhodopsin gene, partial cds. PRGD_OTU130_00ec5d5426f93dd4f4d561c379ef0e27, putative proteorhodopsin gene, partial cds. KJ929463 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ACCTTAACTGTTCCACTCATGTGTGTTGAGTTCTATTTGATCACCAAGAAAGCTGGTGGTACGAAGTCAATCTTGTACAAACTGATCTTAGCTTCAGTTGCGATGCTAGTTACCGGTTACATCGGTGAGGCATTCTACGCAAACGATGCTGTTTCATGGGTTTGGGGTGCTATTTCTGGTGCTGCTTACTTCTACATCGTATGGATGGTATGGAAAGGAGACGTTGCGAAATTGGCAAACAACGCTGGTGGTGCAGTAGCAAAAGCAAACAGTGCTTTGGCTAAATTTGTAATCATC TLTVPLMCVEFYLITKKAGGTKSILYKLILASVAMLVTGYIGEAFYANDAVSWVWGAISGAAYFYIVWMVWKGDVAKLANNAGGAVAKANSALAKFVII ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCTTAACTGTTCCACTCATGTGTGTTGAGTTCTATTTGATCACCAAGAAA---------GCT------GGTGGTACGAAG---TCAATC------------------------------------TTGTACAAA---CTGATCTTAGCTTCAGTTGCGATGCTAGTTACCGGTTACATCGGTGAG---------GCA------------------TTC------TACGCA------------------------------------------------------AAC---------GAT---------------------------GCTGTTTCA------------------TGGGTTTGG---GGTGCTATTTCTGGTGCTGCTTACTTCTACATCGTATGGATGGTA---------------TGG------AAA---GGAGACGTTGCGAAATTGGCAAACAAC------GCT---GGTGGTGCA---GTA---GCA---AAA---GCA---AAC---AGT---GCTTTG---GCTAAATTTGTAATCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLITKK---A--GGTK-SI------------LYK-LILASVAMLVTGYIGE---A------F--YA------------------N---D---------AVS------WVW-GAISGAAYFYIVWMV-----W--K-GDVAKLANN--A-GGA-V-A-K-A-N-S-AL-AKFVII-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929466 [II-CFB-AAA027E17] PRGD_OTU130_f3798bd680712f69ca288c6c399a65c7 gb|KJ929466| PRGD_OTU130_f3798bd680712f69ca288c6c399a65c7, putative proteorhodopsin gene, partial cds. PRGD_OTU130_f3798bd680712f69ca288c6c399a65c7, putative proteorhodopsin gene, partial cds. KJ929466 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683) ACACTAACTGTGCCATTAATGTGTGTTGAGTTTTACCTCATCACGAAAAAAGCCGGTGGAACAAAATCAATCTTATATAAGCTAATCTTTGCCTCTGTAGCAATGTTGGTAGCAGGTTACATCGGAGAAGCATTCTATGCTAACGATGCTGTTTCATGGGTTTGGGGTGCTATTTCTGGTGCTGCTTACTTCTACATTGTGTGGATGGTATGGAAAGGAGATGTTGCTAAATTGGCAAACAACGCTGGTGGTGCTGTAGCGAAAGCTAACGGCGCTTTGGCTAAATTTGTAATCATT TLTVPLMCVEFYLITKKAGGTKSILYKLIFASVAMLVAGYIGEAFYANDAVSWVWGAISGAAYFYIVWMVWKGDVAKLANNAGGAVAKANGALAKFVII ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACTAACTGTGCCATTAATGTGTGTTGAGTTTTACCTCATCACGAAAAAA---------GCC------GGTGGAACAAAA---TCAATC------------------------------------TTATATAAG---CTAATCTTTGCCTCTGTAGCAATGTTGGTAGCAGGTTACATCGGAGAA---------GCA------------------TTC------TATGCT------------------------------------------------------AAC---------GAT---------------------------GCTGTTTCA------------------TGGGTTTGG---GGTGCTATTTCTGGTGCTGCTTACTTCTACATTGTGTGGATGGTA---------------TGG------AAA---GGAGATGTTGCTAAATTGGCAAACAAC------GCT---GGTGGTGCT---GTA---GCG---AAA---GCT---AAC---GGC---GCTTTG---GCTAAATTTGTAATCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLITKK---A--GGTK-SI------------LYK-LIFASVAMLVAGYIGE---A------F--YA------------------N---D---------AVS------WVW-GAISGAAYFYIVWMV-----W--K-GDVAKLANN--A-GGA-V-A-K-A-N-G-AL-AKFVII-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929464 [II-CFB-AAA027E17] PRGD_OTU130_1c5f5dfe2c72c35aa52318504520d565 gb|KJ929464| PRGD_OTU130_1c5f5dfe2c72c35aa52318504520d565, putative proteorhodopsin gene, partial cds. PRGD_OTU130_1c5f5dfe2c72c35aa52318504520d565, putative proteorhodopsin gene, partial cds. KJ929464 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Indian Ocean (-33.28, 45.35) ACTTTAACTGTTCCATTGATGTGTGTTGAGTTTTATCTTATCACTAAGAAAGCAGGCGGTACAAAATCAATCCTTTGGAAACTTATCGGAGCTTCTGTAATAATGCTTGTTACTGGTTACATCGGTGAAGCATTCTATGCAACTGAAGCTATGTCAGCATTCTGGGGTGCACTTTCTGGTGCTGCTTACTTCTACATTGTATGGATGGTATGGCGCGGAGATGTTGCCAAGCTTGCAAACAGCGCAGGTGGACAGGTTGCTAAAGCAAATAAGGCTTTAGGTAAATTTGTTATTATT TLTVPLMCVEFYLITKKAGGTKSILWKLIGASVIMLVTGYIGEAFYATEAMSAFWGALSGAAYFYIVWMVWRGDVAKLANSAGGQVAKANKALGKFVII ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTTAACTGTTCCATTGATGTGTGTTGAGTTTTATCTTATCACTAAGAAA---------GCA------GGCGGTACAAAA---TCAATC------------------------------------CTTTGGAAA---CTTATCGGAGCTTCTGTAATAATGCTTGTTACTGGTTACATCGGTGAA---------GCA------------------TTC------TATGCA------------------------------------------------------ACT---------GAA---------------------------GCTATGTCA------------------GCATTCTGG---GGTGCACTTTCTGGTGCTGCTTACTTCTACATTGTATGGATGGTA---------------TGG------CGC---GGAGATGTTGCCAAGCTTGCAAACAGC------GCA---GGTGGACAG---GTT---GCT---AAA---GCA---AAT---AAG---GCTTTA---GGTAAATTTGTTATTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLITKK---A--GGTK-SI------------LWK-LIGASVIMLVTGYIGE---A------F--YA------------------T---E---------AMS------AFW-GALSGAAYFYIVWMV-----W--R-GDVAKLANS--A-GGQ-V-A-K-A-N-K-AL-GKFVII-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929822 [II-CFB-AAA027E17] PRGD_OTU273_otuREP_ced77e3597ee9fda740ce54831ed230a gb|KJ929822| PRGD_OTU273_otuREP_ced77e3597ee9fda740ce54831ed230a, putative proteorhodopsin gene, partial cds. PRGD_OTU273_otuREP_ced77e3597ee9fda740ce54831ed230a, putative proteorhodopsin gene, partial cds. KJ929822 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45) ACTTTAACAGTTCCATTGATGTGTGTTGAATTCTATTTGATTACTAAGAAAGTAGGTGGTACAATGGCAATTCTATGGAAGCTAATCTTGGCTTCAGTAGCAATGCTTGTATTGGGTTACATTGGAGAAGCGTTCTACGCTGATCAATCACAATCGTGGGTATGGGGAGCACTCTCTGGTGCTGCTTACTTCTACATTGTATGGTTAGTTTGGGCTGGCGACGTTGCTAAACTTGCTAATGCAGCAGGTGGTAAAGTTGCTAAAGCAAACTCTTTGTTACGCAGATTTGTATTAGTC TLTVPLMCVEFYLITKKVGGTMAILWKLILASVAMLVLGYIGEAFYADQSQSWVWGALSGAAYFYIVWLVWAGDVAKLANAAGGKVAKANSLLRRFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTTAACAGTTCCATTGATGTGTGTTGAATTCTATTTGATTACTAAGAAA---------GTA------GGTGGTACAATG---GCAATT------------------------------------CTATGGAAG---CTAATCTTGGCTTCAGTAGCAATGCTTGTATTGGGTTACATTGGAGAA---------GCG------------------TTC------TACGCT------------------------------------------------------GAT---------CAA---------------------------TCACAATCG------------------TGGGTATGG---GGAGCACTCTCTGGTGCTGCTTACTTCTACATTGTATGGTTAGTT---------------TGG------GCT---GGCGACGTTGCTAAACTTGCTAATGCA------GCA---GGTGGTAAA---GTT---GCT---AAA---GCA---AAC---TCT---TTGTTA---CGCAGATTTGTATTAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLITKK---V--GGTM-AI------------LWK-LILASVAMLVLGYIGE---A------F--YA------------------D---Q---------SQS------WVW-GALSGAAYFYIVWLV-----W--A-GDVAKLANA--A-GGK-V-A-K-A-N-S-LL-RRFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929913 [II-CFB-AAA027E17] PRGD_OTU364_otuREP_3ce4e673d097d064d8e19cf1b26c4a01 gb|KJ929913| PRGD_OTU364_otuREP_3ce4e673d097d064d8e19cf1b26c4a01, putative proteorhodopsin gene, partial cds. PRGD_OTU364_otuREP_3ce4e673d097d064d8e19cf1b26c4a01, putative proteorhodopsin gene, partial cds. KJ929913 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683) ACATTGACTGTTCCTTTGATGTGTGTAGAATTCTATCTTTTAACTAAGAAAGCTGGTGCTAAGATTGGCTTACTTTACAAATTACTTGTTGCTTCAGTAGCTATGCTTGTTCTCGGTTATATCGGAGAAGCATTTTATGCTGGTAGCTCTACTTCTTGGTTATATGGAGCTCTTTCAGGTGCTGCATACTTCTATATTGTATGGTTAGTTTGGAAAGGTGAAGTTGCAGAATTAGCTGCTTCTGCTGGCGGAAAAGTTCAAAGAGCTGTAGGACACCTTACTAAGTTTGTCGTTATC TLTVPLMCVEFYLLTKKAGAKIGLLYKLLVASVAMLVLGYIGEAFYAGSSTSWLYGALSGAAYFYIVWLVWKGEVAELAASAGGKVQRAVGHLTKFVVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATTGACTGTTCCTTTGATGTGTGTAGAATTCTATCTTTTAACTAAGAAA---------GCT------GGTGCTAAGATT---GGCTTA------------------------------------CTTTACAAA---TTACTTGTTGCTTCAGTAGCTATGCTTGTTCTCGGTTATATCGGAGAA---------GCA------------------TTT------TATGCT------------------------------------------------------GGT---------AGCTCT---------------------------ACTTCT------------------TGGTTATAT---GGAGCTCTTTCAGGTGCTGCATACTTCTATATTGTATGGTTAGTT---------------TGG------AAA---GGTGAAGTTGCAGAATTAGCTGCTTCT------GCT---GGCGGAAAA---GTT---CAA---AGA---GCT---GTA---GGA---CACCTT---ACTAAGTTTGTCGTTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTKK---A--GAKI-GL------------LYK-LLVASVAMLVLGYIGE---A------F--YA------------------G---SS---------TS------WLY-GALSGAAYFYIVWLV-----W--K-GEVAELAAS--A-GGK-V-Q-R-A-V-G-HL-TKFVVI-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929833 [II-CFB-AAA027E17] PRGD_OTU284_otuREP_81d3e26d1892378fe8f97069e6e626ed gb|KJ929833| PRGD_OTU284_otuREP_81d3e26d1892378fe8f97069e6e626ed, putative proteorhodopsin gene, partial cds. PRGD_OTU284_otuREP_81d3e26d1892378fe8f97069e6e626ed, putative proteorhodopsin gene, partial cds. KJ929833 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12) ACTCTGACTGTACCTTTAATGTGTGTTGAATTCTATCTTTTGACTAAAAAGGCTGGCGCTAAAATTGGCTTGCTATGGAAATTGATATATGCTTCAGTAGCTATGCTTGCGTTCGGATATATAGGAGAAGCATTCTACACTGAGCCATCAGATGTAATGATGTCATGGGTATTTGGAGCGATTTCCGGTGCTGCATATTTCTACATTGTATGGTTAGTATGGAAAGGTGAAGTTGCTCAATTAGCAGCTTCTGCTGGCGGAAAAGTTCAGAAAGCAGTAGGCTATCTTGCTAAATTCGTTGTTGTA TLTVPLMCVEFYLLTKKAGAKIGLLWKLIYASVAMLAFGYIGEAFYTEPSDVMMSWVFGAISGAAYFYIVWLVWKGEVAQLAASAGGKVQKAVGYLAKFVVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCTGACTGTACCTTTAATGTGTGTTGAATTCTATCTTTTGACTAAAAAG---------GCT------GGCGCTAAAATT---GGCTTG------------------------------------CTATGGAAA---TTGATATATGCTTCAGTAGCTATGCTTGCGTTCGGATATATAGGAGAA---------GCA------------------TTC------TACACT------------------------------------------------------GAG---------CCATCAGATGTA------------------ATGATGTCA------------------TGGGTATTT---GGAGCGATTTCCGGTGCTGCATATTTCTACATTGTATGGTTAGTA---------------TGG------AAA---GGTGAAGTTGCTCAATTAGCAGCTTCT------GCT---GGCGGAAAA---GTT---CAG---AAA---GCA---GTA---GGC---TATCTT---GCTAAATTCGTTGTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTKK---A--GAKI-GL------------LWK-LIYASVAMLAFGYIGE---A------F--YT------------------E---PSDV------MMS------WVF-GAISGAAYFYIVWLV-----W--K-GEVAQLAAS--A-GGK-V-Q-K-A-V-G-YL-AKFVVV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929486 [II-CFB-AAA027E17] PRGD_OTU135_otuREP_e778152b1a17ebc47bc88e6220c72e85 gb|KJ929486| PRGD_OTU135_otuREP_e778152b1a17ebc47bc88e6220c72e85, putative proteorhodopsin gene, partial cds. PRGD_OTU135_otuREP_e778152b1a17ebc47bc88e6220c72e85, putative proteorhodopsin gene, partial cds. KJ929486 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (70.9139, -128.9264; ; ; 67.49, -168.12), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45) ACGTTAACTGTGCCACTCATGTGTGTTGAGTTTTACTTAATCACTAAAAAAGCTGGTGCGAAGATGAGTCTTCTATGGAAACTTATCGCTGCGTCTGTAATCATGTTAGTTACCGGTTACCTTGGTGAGACCATTTACCGCGATACGTCCTCAGTTATGTGGGGTGTTATCTCTGGTGCTGCTTACTTCTACATTGTTTTCTTAGTATGGAAAGGAGAAGTTGCTCAGTTAGCGCAAAACGCAGGTCCTGCGGTTGCTAAAGCTGTAAAAGTTCTATTTTGGTTTGTCTTAGTA TLTVPLMCVEFYLITKKAGAKMSLLWKLIAASVIMLVTGYLGETIYRDTSSVMWGVISGAAYFYIVFLVWKGEVAQLAQNAGPAVAKAVKVLFWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGTTAACTGTGCCACTCATGTGTGTTGAGTTTTACTTAATCACTAAAAAA---------GCT------GGTGCGAAGATG---AGTCTT------------------------------------CTATGGAAA---CTTATCGCTGCGTCTGTAATCATGTTAGTTACCGGTTACCTTGGTGAG---------ACC------------------ATT------TACCGC------------------------------------------------------GAT---------------------------------------ACGTCCTCA------------------GTTATGTGG---GGTGTTATCTCTGGTGCTGCTTACTTCTACATTGTTTTCTTAGTA---------------TGG------AAA---GGAGAAGTTGCTCAGTTAGCGCAAAAC------GCA---GGTCCTGCG---GTT---GCT---AAA---GCT---GTA---AAA---GTTCTA---TTTTGGTTTGTCTTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLITKK---A--GAKM-SL------------LWK-LIAASVIMLVTGYLGE---T------I--YR------------------D-------------TSS------VMW-GVISGAAYFYIVFLV-----W--K-GEVAQLAQN--A-GPA-V-A-K-A-V-K-VL-FWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929487 [II-CFB-AAA027E17] PRGD_OTU135_745ebe5a3ab4c096542c1efdb59de539 gb|KJ929487| PRGD_OTU135_745ebe5a3ab4c096542c1efdb59de539, putative proteorhodopsin gene, partial cds. PRGD_OTU135_745ebe5a3ab4c096542c1efdb59de539, putative proteorhodopsin gene, partial cds. KJ929487 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) ACGCTAACTGTACCACTAATGTGTGTTGAGTTCTACTTGATCACTAAGAAAGCTGGTGCAAAAATGGGTCTTCTATGGAAACTCATCTTCGCGTCTGTAATTATGCTTGTAACTGGTTACCTCGGTGAGACAATTTACCGTGAGTCTTCAGTTCTTTGGGGTGTTATCTCTGGTGCTGCTTACTTCTACATCGTATTCTTGGTGTGGAAAGGAGAAGTGGCTCAGTTGGCAGCCAACGCTGGTCCTGCAGTAGCGAAAGCAGTAAAAGTTCTTTTCTGGTTCGTTTTAGTA TLTVPLMCVEFYLITKKAGAKMGLLWKLIFASVIMLVTGYLGETIYRESSVLWGVISGAAYFYIVFLVWKGEVAQLAANAGPAVAKAVKVLFWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCTAACTGTACCACTAATGTGTGTTGAGTTCTACTTGATCACTAAGAAA---------GCT------GGTGCAAAAATG---GGTCTT------------------------------------CTATGGAAA---CTCATCTTCGCGTCTGTAATTATGCTTGTAACTGGTTACCTCGGTGAG---------ACA------------------ATT------TACCGT------------------------------------------------------GAG------------------------------------------TCTTCA------------------GTTCTTTGG---GGTGTTATCTCTGGTGCTGCTTACTTCTACATCGTATTCTTGGTG---------------TGG------AAA---GGAGAAGTGGCTCAGTTGGCAGCCAAC------GCT---GGTCCTGCA---GTA---GCG---AAA---GCA---GTA---AAA---GTTCTT---TTCTGGTTCGTTTTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLITKK---A--GAKM-GL------------LWK-LIFASVIMLVTGYLGE---T------I--YR------------------E--------------SS------VLW-GVISGAAYFYIVFLV-----W--K-GEVAQLAAN--A-GPA-V-A-K-A-V-K-VL-FWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929489 [II-CFB-AAA027E17] PRGD_OTU135_b4c3a21f4d865c44244ebc53194d3dc1 gb|KJ929489| PRGD_OTU135_b4c3a21f4d865c44244ebc53194d3dc1, putative proteorhodopsin gene, partial cds. PRGD_OTU135_b4c3a21f4d865c44244ebc53194d3dc1, putative proteorhodopsin gene, partial cds. KJ929489 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-35.05, 23.73) ACGCTAACTGTACCACTAATGTGTGTTGAGTTCTACTTGATCACTAAGAAAGCTGGTGCAAAAATGGGTCTTCTATGGAAACTCATCTTCGCGTCTGTTATTATGCTTGTAACTGGTTACCTCGGTGAGACAATTTACCGTGAGTCTTCAGTTATGTGGGGTGTTATCTCTGGTGCTGCTTACTTCTACATCGTATTCTTGGTGTGGAAAGGAGAAGTGGCTCAGTTGGCAGCCAACGCTGGTCCTGCAGTAGCGAAAGCAGTAAAAGTTCTTTTCTGGTTCGTTTTAGTA TLTVPLMCVEFYLITKKAGAKMGLLWKLIFASVIMLVTGYLGETIYRESSVMWGVISGAAYFYIVFLVWKGEVAQLAANAGPAVAKAVKVLFWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCTAACTGTACCACTAATGTGTGTTGAGTTCTACTTGATCACTAAGAAA---------GCT------GGTGCAAAAATG---GGTCTT------------------------------------CTATGGAAA---CTCATCTTCGCGTCTGTTATTATGCTTGTAACTGGTTACCTCGGTGAG---------ACA------------------ATT------TACCGT------------------------------------------------------GAG------------------------------------------TCTTCA------------------GTTATGTGG---GGTGTTATCTCTGGTGCTGCTTACTTCTACATCGTATTCTTGGTG---------------TGG------AAA---GGAGAAGTGGCTCAGTTGGCAGCCAAC------GCT---GGTCCTGCA---GTA---GCG---AAA---GCA---GTA---AAA---GTTCTT---TTCTGGTTCGTTTTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLITKK---A--GAKM-GL------------LWK-LIFASVIMLVTGYLGE---T------I--YR------------------E--------------SS------VMW-GVISGAAYFYIVFLV-----W--K-GEVAQLAAN--A-GPA-V-A-K-A-V-K-VL-FWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929488 [II-CFB-AAA027E17] PRGD_OTU135_a1402304c5c2673fbe199dc67d13d637 gb|KJ929488| PRGD_OTU135_a1402304c5c2673fbe199dc67d13d637, putative proteorhodopsin gene, partial cds. PRGD_OTU135_a1402304c5c2673fbe199dc67d13d637, putative proteorhodopsin gene, partial cds. KJ929488 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) ACGCTCACAGTACCATTAATGTGTGTTGAGTTTTACTTGATCACTAAAAAAGCTGGTGCTAAAATGAGCCTTCTTTGGAAGCTAATCTTTGCTTCTGTAATTATGCTTGTAACTGGTTACCTCGGTGAAACTATCTACCGTGACTCATCAGTTATGTGGGGTGTAATTTCCGGAGCAGCTTATTTCTACATTGTATTCTTGGTGTGGAAAGGAGAAGTTGCACAATTGGCAGCAAATGCTGGCCCTGCAGTTGCAAAAGCAGTCAAAGTATTATTCTGGTTCGTCCTCGTA TLTVPLMCVEFYLITKKAGAKMSLLWKLIFASVIMLVTGYLGETIYRDSSVMWGVISGAAYFYIVFLVWKGEVAQLAANAGPAVAKAVKVLFWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCTCACAGTACCATTAATGTGTGTTGAGTTTTACTTGATCACTAAAAAA---------GCT------GGTGCTAAAATG---AGCCTT------------------------------------CTTTGGAAG---CTAATCTTTGCTTCTGTAATTATGCTTGTAACTGGTTACCTCGGTGAA---------ACT------------------ATC------TACCGT------------------------------------------------------GAC------------------------------------------TCATCA------------------GTTATGTGG---GGTGTAATTTCCGGAGCAGCTTATTTCTACATTGTATTCTTGGTG---------------TGG------AAA---GGAGAAGTTGCACAATTGGCAGCAAAT------GCT---GGCCCTGCA---GTT---GCA---AAA---GCA---GTC---AAA---GTATTA---TTCTGGTTCGTCCTCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLITKK---A--GAKM-SL------------LWK-LIFASVIMLVTGYLGE---T------I--YR------------------D--------------SS------VMW-GVISGAAYFYIVFLV-----W--K-GEVAQLAAN--A-GPA-V-A-K-A-V-K-VL-FWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929878 [II-CFB-AAA027E17] PRGD_OTU329_otuREP_4dcc54f0efb13e8f40ffd6664332fcdd gb|KJ929878| PRGD_OTU329_otuREP_4dcc54f0efb13e8f40ffd6664332fcdd, putative proteorhodopsin gene, partial cds. PRGD_OTU329_otuREP_4dcc54f0efb13e8f40ffd6664332fcdd, putative proteorhodopsin gene, partial cds. KJ929878 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) TTATTGACTGTTCCGTTGATGTGTGTGGAGTTCTACTTGATTACCAAGAAAGCCGGTGCTAAAATCGGTTTGCTATGGAAGCTAATCGTGGCTTCTGTAATAATGTTGGTGACAGGTTACTTCGGAGAAGCAGTGGATCGTGACAACTCCGTTATGTGGGGTGTTCTTTCTGGTGCGGCTTACTTCTACATCGCTTACCTAGTATGGTTCGGTGAAGTTGCTGAATTGGCTAAAACCGCAGGTGAAAACGTACAAAAAGCCGTTAAAATCTTGGCTTGGTTCGTATTCGCA LLTVPLMCVEFYLITKKAGAKIGLLWKLIVASVIMLVTGYFGEAVDRDNSVMWGVLSGAAYFYIAYLVWFGEVAELAKTAGENVQKAVKILAWFVFA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTGACTGTTCCGTTGATGTGTGTGGAGTTCTACTTGATTACCAAGAAA---------GCC------GGTGCTAAAATC---GGTTTG------------------------------------CTATGGAAG---CTAATCGTGGCTTCTGTAATAATGTTGGTGACAGGTTACTTCGGAGAA---------GCA------------------GTG------GATCGT------------------------------------------------------------------------------------------------GACAACTCC------------------GTTATGTGG---GGTGTTCTTTCTGGTGCGGCTTACTTCTACATCGCTTACCTAGTA---------------TGG------TTC---GGTGAAGTTGCTGAATTGGCTAAAACC------GCA---GGTGAAAAC---GTA---CAA---AAA---GCC---GTT---AAA---ATCTTG---GCTTGGTTCGTATTCGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLMCVEFYLITKK---A--GAKI-GL------------LWK-LIVASVIMLVTGYFGE---A------V--DR--------------------------------DNS------VMW-GVLSGAAYFYIAYLV-----W--F-GEVAELAKT--A-GEN-V-Q-K-A-V-K-IL-AWFVFA-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929376 [II-CFB-AAA027E17] PRGD_OTU113_30b5c82e5a268f76dd74ddd4ee7ec0f5 gb|KJ929376| PRGD_OTU113_30b5c82e5a268f76dd74ddd4ee7ec0f5, putative proteorhodopsin gene, partial cds. PRGD_OTU113_30b5c82e5a268f76dd74ddd4ee7ec0f5, putative proteorhodopsin gene, partial cds. KJ929376 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (72.0542, -130.8781; ; 67.49, -168.12) ATTCTTACCGTGCCATTGATGTGCGTTGAATTCTACTTGATCACCAAAAAAGCCGGAGCGAAAATTTCGCTGCTTTGGAAATTGATCTTTGCGTCATTGGTTATGCTTGTAACAGGATATTTTGGAGAAACAATAGACAGTGGAAACAGCGTGCTTTGGGGCGTAATCTCAGGAGCTGCATATTTTTACATTGCTTATCTCGTTTGGTTTGGGGAAATTGCAAAATTATCTCAAACTGCTGGACCACAAGTAGCGAAAGCAACAAGAGCTCTAGCATGGTTCGTGTTGGTG ILTVPLMCVEFYLITKKAGAKISLLWKLIFASLVMLVTGYFGETIDSGNSVLWGVISGAAYFYIAYLVWFGEIAKLSQTAGPQVAKATRALAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTACCGTGCCATTGATGTGCGTTGAATTCTACTTGATCACCAAAAAA---------GCC------GGAGCGAAAATT---TCGCTG------------------------------------CTTTGGAAA---TTGATCTTTGCGTCATTGGTTATGCTTGTAACAGGATATTTTGGAGAA---------ACA------------------ATA------GACAGT------------------------------------------------------------------------------------------------GGAAACAGC------------------GTGCTTTGG---GGCGTAATCTCAGGAGCTGCATATTTTTACATTGCTTATCTCGTT---------------TGG------TTT---GGGGAAATTGCAAAATTATCTCAAACT------GCT---GGACCACAA---GTA---GCG---AAA---GCA---ACA---AGA---GCTCTA---GCATGGTTCGTGTTGGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLITKK---A--GAKI-SL------------LWK-LIFASLVMLVTGYFGE---T------I--DS--------------------------------GNS------VLW-GVISGAAYFYIAYLV-----W--F-GEIAKLSQT--A-GPQ-V-A-K-A-T-R-AL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929375 [II-CFB-AAA027E17] PRGD_OTU113_019c2ae2db4dc7a22ec0b81a66ea0037 gb|KJ929375| PRGD_OTU113_019c2ae2db4dc7a22ec0b81a66ea0037, putative proteorhodopsin gene, partial cds. PRGD_OTU113_019c2ae2db4dc7a22ec0b81a66ea0037, putative proteorhodopsin gene, partial cds. KJ929375 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 01-juil-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATCTTGACCGTTCCGTTGATGTGTGTGGAATTTTACTTAATCACGAAAAAAGCAGGCGCGAAAATTGGCTTGTTGTGGAAATTAATTTTGGCATCTTTGGTCATGTTAGTAACAGGTTACTTTGGAGAAACTATCGACCGCGATCACAGTGTAATGTGGGGTGTTTTATCAGGAGCAGCTTATTTCTACATTGCATATCTTGTTTGGTTTGGGGAAATTGCAAAATTATCTCAATCAGCAGGTCCGCAAGTGGCAAAAGCAACAAGAATTCTTGCTTGGTTCGTATTAGTA ILTVPLMCVEFYLITKKAGAKIGLLWKLILASLVMLVTGYFGETIDRDHSVMWGVLSGAAYFYIAYLVWFGEIAKLSQSAGPQVAKATRILAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTGACCGTTCCGTTGATGTGTGTGGAATTTTACTTAATCACGAAAAAA---------GCA------GGCGCGAAAATT---GGCTTG------------------------------------TTGTGGAAA---TTAATTTTGGCATCTTTGGTCATGTTAGTAACAGGTTACTTTGGAGAA---------ACT------------------ATC------GACCGC------------------------------------------------------------------------------------------------GATCACAGT------------------GTAATGTGG---GGTGTTTTATCAGGAGCAGCTTATTTCTACATTGCATATCTTGTT---------------TGG------TTT---GGGGAAATTGCAAAATTATCTCAATCA------GCA---GGTCCGCAA---GTG---GCA---AAA---GCA---ACA---AGA---ATTCTT---GCTTGGTTCGTATTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLITKK---A--GAKI-GL------------LWK-LILASLVMLVTGYFGE---T------I--DR--------------------------------DHS------VMW-GVLSGAAYFYIAYLV-----W--F-GEIAKLSQS--A-GPQ-V-A-K-A-T-R-IL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929377 [II-CFB-AAA027E17] PRGD_OTU113_78f632a6fdfb566582b87a0a4f475330 gb|KJ929377| PRGD_OTU113_78f632a6fdfb566582b87a0a4f475330, putative proteorhodopsin gene, partial cds. PRGD_OTU113_78f632a6fdfb566582b87a0a4f475330, putative proteorhodopsin gene, partial cds. KJ929377 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185), English Channel (48.7717, -3.9683) ATCTTGACTGTTCCATTGATGTGCGTAGAATTTTACTTAATCACGAAAAAAGCAGGCGCAAAAATTGGTTTGTTGTGGAAATTAATTTTGGCATCTGTGATCATGTTAGTAACAGGTTACGTTGGAGAAACTATCGACAGCAGTAACAGTGTTATGTGGGGTGTTTTGTCAGGAGCAGCTTATTTCTACATTGCCTATCTTGTTTGGTTTGGGGAAATTGCAAAATTATCTCAAACAGCAGGGCCTCAAGTGGCGAAAGCAACAAGAATTCTTGCTTGGTTCGTATTAGTT ILTVPLMCVEFYLITKKAGAKIGLLWKLILASVIMLVTGYVGETIDSSNSVMWGVLSGAAYFYIAYLVWFGEIAKLSQTAGPQVAKATRILAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTGACTGTTCCATTGATGTGCGTAGAATTTTACTTAATCACGAAAAAA---------GCA------GGCGCAAAAATT---GGTTTG------------------------------------TTGTGGAAA---TTAATTTTGGCATCTGTGATCATGTTAGTAACAGGTTACGTTGGAGAA---------ACT------------------ATC------GACAGC------------------------------------------------------------------------------------------------AGTAACAGT------------------GTTATGTGG---GGTGTTTTGTCAGGAGCAGCTTATTTCTACATTGCCTATCTTGTT---------------TGG------TTT---GGGGAAATTGCAAAATTATCTCAAACA------GCA---GGGCCTCAA---GTG---GCG---AAA---GCA---ACA---AGA---ATTCTT---GCTTGGTTCGTATTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLITKK---A--GAKI-GL------------LWK-LILASVIMLVTGYVGE---T------I--DS--------------------------------SNS------VMW-GVLSGAAYFYIAYLV-----W--F-GEIAKLSQT--A-GPQ-V-A-K-A-T-R-IL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929374 [II-CFB-AAA027E17] PRGD_OTU113_otuREP_5aa666b44f618ffa89a13961975e80a0 gb|KJ929374| PRGD_OTU113_otuREP_5aa666b44f618ffa89a13961975e80a0, putative proteorhodopsin gene, partial cds. PRGD_OTU113_otuREP_5aa666b44f618ffa89a13961975e80a0, putative proteorhodopsin gene, partial cds. KJ929374 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185; 67.49, -168.12) ATTTTGACTGTGCCATTAATGTGTGTAGAATTCTACTTAATAACAAGGAAAGCAGGTGCAAAAATCAGTCTACTTTGGAAGTTAATTTTAGCATCAGTAGTAATGTTAGTAACGGGCTATGTAGGCGAAACAATAGACAGAGACCACAGTGTACTTTGGGGTGTAGTTTCAGGTGGTGCTTACTTCTATATTGCTTATCTAATATGGTTTGGTGAAGTTGCTAAATTGGCTCAAACAGCTGGACCTCAAGTTGCAAAAGCTACGCGAGTACTTGCTTGGTTTGTTCTCGTT ILTVPLMCVEFYLITRKAGAKISLLWKLILASVVMLVTGYVGETIDRDHSVLWGVVSGGAYFYIAYLIWFGEVAKLAQTAGPQVAKATRVLAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTGACTGTGCCATTAATGTGTGTAGAATTCTACTTAATAACAAGGAAA---------GCA------GGTGCAAAAATC---AGTCTA------------------------------------CTTTGGAAG---TTAATTTTAGCATCAGTAGTAATGTTAGTAACGGGCTATGTAGGCGAA---------ACA------------------ATA------GACAGA------------------------------------------------------------------------------------------------GACCACAGT------------------GTACTTTGG---GGTGTAGTTTCAGGTGGTGCTTACTTCTATATTGCTTATCTAATA---------------TGG------TTT---GGTGAAGTTGCTAAATTGGCTCAAACA------GCT---GGACCTCAA---GTT---GCA---AAA---GCT---ACG---CGA---GTACTT---GCTTGGTTTGTTCTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLITRK---A--GAKI-SL------------LWK-LILASVVMLVTGYVGE---T------I--DR--------------------------------DHS------VLW-GVVSGGAYFYIAYLI-----W--F-GEVAKLAQT--A-GPQ-V-A-K-A-T-R-VL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929379 [II-CFB-AAA027E17] PRGD_OTU113_e5a9b9d0a7ffe82e6b9222e6dc95a8fe gb|KJ929379| PRGD_OTU113_e5a9b9d0a7ffe82e6b9222e6dc95a8fe, putative proteorhodopsin gene, partial cds. PRGD_OTU113_e5a9b9d0a7ffe82e6b9222e6dc95a8fe, putative proteorhodopsin gene, partial cds. KJ929379 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185), English Channel (48.7717, -3.9683) ATTTTGACTGTGCCATTAATGTGTGTAGAATTCTACTTAATAACAAGGAAAGCAGGTGCAAAAATCACTCTACTTTGGAAGTTAATTTTAGCATCAGTAGTAATGTTAGTAGCGGGCTATGTAGGCGAAACAATAGACAGAGACCACAGTGTACTTTGGGGTGTAGTTTCAGGTGGTGCTTACTTCTATATTGCTTATCTAATATGGTTTGGTGAAGTTGCTAAATTGGCTCAAACAGCTGGACCTCAAGTTGCAAAAGCTACGCGAGTACTTGCTTGGTTTGTTCTTGTT ILTVPLMCVEFYLITRKAGAKITLLWKLILASVVMLVAGYVGETIDRDHSVLWGVVSGGAYFYIAYLIWFGEVAKLAQTAGPQVAKATRVLAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTGACTGTGCCATTAATGTGTGTAGAATTCTACTTAATAACAAGGAAA---------GCA------GGTGCAAAAATC---ACTCTA------------------------------------CTTTGGAAG---TTAATTTTAGCATCAGTAGTAATGTTAGTAGCGGGCTATGTAGGCGAA---------ACA------------------ATA------GACAGA------------------------------------------------------------------------------------------------GACCACAGT------------------GTACTTTGG---GGTGTAGTTTCAGGTGGTGCTTACTTCTATATTGCTTATCTAATA---------------TGG------TTT---GGTGAAGTTGCTAAATTGGCTCAAACA------GCT---GGACCTCAA---GTT---GCA---AAA---GCT---ACG---CGA---GTACTT---GCTTGGTTTGTTCTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLITRK---A--GAKI-TL------------LWK-LILASVVMLVAGYVGE---T------I--DR--------------------------------DHS------VLW-GVVSGGAYFYIAYLI-----W--F-GEVAKLAQT--A-GPQ-V-A-K-A-T-R-VL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929378 [II-CFB-AAA027E17] PRGD_OTU113_a4baf8cf168948e361d622f80776fac6 gb|KJ929378| PRGD_OTU113_a4baf8cf168948e361d622f80776fac6, putative proteorhodopsin gene, partial cds. PRGD_OTU113_a4baf8cf168948e361d622f80776fac6, putative proteorhodopsin gene, partial cds. KJ929378 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185), Mediterranean Sea (38.6308, 7.9097) ATATTGACTGTGCCTTTAATGTGTGTAGAATTCTATTTAATAACTAGAAAAGCTGGGGCAAAAATAAGCCTACTTTGGAAATTGATAGCCGCATCATTAGTGATGCTAGTAACCGGTTACTTTGGTGAAACAATAGATAGATCCAATAGCGTACTATGGGGTGTGATTTCAGGTGCTGCCTACTTCTACATTGCTTATTTAGTGTGGTTCGGAGAAGTAGCTAAATTAGCAAAAACGGCTGGACCTCAAGTTGCAAAAGCAACACGAGTACTCGCTTGGTTTGTTCTCGTT ILTVPLMCVEFYLITRKAGAKISLLWKLIAASLVMLVTGYFGETIDRSNSVLWGVISGAAYFYIAYLVWFGEVAKLAKTAGPQVAKATRVLAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTGACTGTGCCTTTAATGTGTGTAGAATTCTATTTAATAACTAGAAAA---------GCT------GGGGCAAAAATA---AGCCTA------------------------------------CTTTGGAAA---TTGATAGCCGCATCATTAGTGATGCTAGTAACCGGTTACTTTGGTGAA---------ACA------------------ATA------GATAGA------------------------------------------------------------------------------------------------TCCAATAGC------------------GTACTATGG---GGTGTGATTTCAGGTGCTGCCTACTTCTACATTGCTTATTTAGTG---------------TGG------TTC---GGAGAAGTAGCTAAATTAGCAAAAACG------GCT---GGACCTCAA---GTT---GCA---AAA---GCA---ACA---CGA---GTACTC---GCTTGGTTTGTTCTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLITRK---A--GAKI-SL------------LWK-LIAASLVMLVTGYFGE---T------I--DR--------------------------------SNS------VLW-GVISGAAYFYIAYLV-----W--F-GEVAKLAKT--A-GPQ-V-A-K-A-T-R-VL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929884 [II-CFB-AAA027E17] PRGD_OTU335_otuREP_1b2cdd9beface43ba886f977d106fab6 gb|KJ929884| PRGD_OTU335_otuREP_1b2cdd9beface43ba886f977d106fab6, putative proteorhodopsin gene, partial cds. PRGD_OTU335_otuREP_1b2cdd9beface43ba886f977d106fab6, putative proteorhodopsin gene, partial cds. KJ929884 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTATTAACCGTACCATTGATGTGTGTTGAATTTTACCTCATCACTAAAAAAGCCGGAGCTAAATTGGCTTTACTATGGAAACTGATTGCAGCTTCTGTTTTTATGCTGGTTACTGGTTATATAGGCGAGGCTATTTATCCTACAGAAAAACAAAGTTGGATTTGGGGTTTTATCAGTAGCATAGGTTATTTCTACATTGTCTATCTCGTTTGGTTTGGTGAAGTAGCAAAGCTTGCCAACAATGCAGGTCCTGCTGTTGCCAAAGCAGTAAGAACATTAGCATGGTTTGTATTAGTG LLTVPLMCVEFYLITKKAGAKLALLWKLIAASVFMLVTGYIGEAIYPTEKQSWIWGFISSIGYFYIVYLVWFGEVAKLANNAGPAVAKAVRTLAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACCGTACCATTGATGTGTGTTGAATTTTACCTCATCACTAAAAAA---------GCC------GGAGCTAAATTG---GCTTTA------------------------------------CTATGGAAA---CTGATTGCAGCTTCTGTTTTTATGCTGGTTACTGGTTATATAGGCGAG---------GCT------------------ATT------TATCCT------------------------------------------------------ACA---------GAA---------------------------AAACAAAGT------------------TGGATTTGG---GGTTTTATCAGTAGCATAGGTTATTTCTACATTGTCTATCTCGTT---------------TGG------TTT---GGTGAAGTAGCAAAGCTTGCCAACAAT------GCA---GGTCCTGCT---GTT---GCC---AAA---GCA---GTA---AGA---ACATTA---GCATGGTTTGTATTAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLMCVEFYLITKK---A--GAKL-AL------------LWK-LIAASVFMLVTGYIGE---A------I--YP------------------T---E---------KQS------WIW-GFISSIGYFYIVYLV-----W--F-GEVAKLANN--A-GPA-V-A-K-A-V-R-TL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929699 [II-CFB-AAA027E17] PRGD_OTU201_988a6e617bb157db735d583625577b94 gb|KJ929699| PRGD_OTU201_988a6e617bb157db735d583625577b94, putative proteorhodopsin gene, partial cds. PRGD_OTU201_988a6e617bb157db735d583625577b94, putative proteorhodopsin gene, partial cds. KJ929699 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) ATTCTAACGGTTCCATTGATGTGTGTTGAGTTTTATCTCATCACAAAAAAAGCAGGAGCGAAGATTGGTTTGTTGTGGAAACTCATCGCGGCTTCTGTGGTCATGTTGGTGACCGGGTATTTCGGTGAGACCATCTACCGCGAAGCGAGTGTCCTATGGGGCGTCGTATCCGGTGCAGCATACTTTTACATCGTATATCTAATATGGTTCGGAGAAGTGGCTCAGCTCGCAAAGGACGCGGGTCCCCAGGTGGCGAAAGCCAATAGAATATTAGCGTGGTTTGTGTTCGTG ILTVPLMCVEFYLITKKAGAKIGLLWKLIAASVVMLVTGYFGETIYREASVLWGVVSGAAYFYIVYLIWFGEVAQLAKDAGPQVAKANRILAWFVFV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTAACGGTTCCATTGATGTGTGTTGAGTTTTATCTCATCACAAAAAAA---------GCA------GGAGCGAAGATT---GGTTTG------------------------------------TTGTGGAAA---CTCATCGCGGCTTCTGTGGTCATGTTGGTGACCGGGTATTTCGGTGAG---------ACC------------------ATC------TACCGC------------------------------------------------------------------------------------------------GAAGCGAGT------------------GTCCTATGG---GGCGTCGTATCCGGTGCAGCATACTTTTACATCGTATATCTAATA---------------TGG------TTC---GGAGAAGTGGCTCAGCTCGCAAAGGAC------GCG---GGTCCCCAG---GTG---GCG---AAA---GCC---AAT---AGA---ATATTA---GCGTGGTTTGTGTTCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLITKK---A--GAKI-GL------------LWK-LIAASVVMLVTGYFGE---T------I--YR--------------------------------EAS------VLW-GVVSGAAYFYIVYLI-----W--F-GEVAQLAKD--A-GPQ-V-A-K-A-N-R-IL-AWFVFV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929698 [II-CFB-AAA027E17] PRGD_OTU201_otuREP_fef0b4db518aa4e269c0b22ef9b23249 gb|KJ929698| PRGD_OTU201_otuREP_fef0b4db518aa4e269c0b22ef9b23249, putative proteorhodopsin gene, partial cds. PRGD_OTU201_otuREP_fef0b4db518aa4e269c0b22ef9b23249, putative proteorhodopsin gene, partial cds. KJ929698 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTTTAACCGTCCCCCTCATGTGCGTTGAATTCTATTTAATCACGAAGAAAGCGGGCGCCAAGATCGGTTTGTTGTGGAAACTGATCGTCGCCTCCCTTTTCATGCTGGTCACCGGTTACCTCGGCGAGACCATCTACCGAGACAGCAGTGTTTTTTGGGGCGTGGTGTCCGGGGCCGCCTACTTTTATATTGTCTACCTCATTTGGTTCGGTGAGGTCGCGAAGTTGGCCAATAAGGCCGGGCCACAAGTGGCCAAGGCCAACCGAGTACTGGCATGGTTTGTTTTCGTC ILTVPLMCVEFYLITKKAGAKIGLLWKLIVASLFMLVTGYLGETIYRDSSVFWGVVSGAAYFYIVYLIWFGEVAKLANKAGPQVAKANRVLAWFVFV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACCGTCCCCCTCATGTGCGTTGAATTCTATTTAATCACGAAGAAA---------GCG------GGCGCCAAGATC---GGTTTG------------------------------------TTGTGGAAA---CTGATCGTCGCCTCCCTTTTCATGCTGGTCACCGGTTACCTCGGCGAG---------ACC------------------ATC------TACCGA------------------------------------------------------------------------------------------------GACAGCAGT------------------GTTTTTTGG---GGCGTGGTGTCCGGGGCCGCCTACTTTTATATTGTCTACCTCATT---------------TGG------TTC---GGTGAGGTCGCGAAGTTGGCCAATAAG------GCC---GGGCCACAA---GTG---GCC---AAG---GCC---AAC---CGA---GTACTG---GCATGGTTTGTTTTCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLITKK---A--GAKI-GL------------LWK-LIVASLFMLVTGYLGE---T------I--YR--------------------------------DSS------VFW-GVVSGAAYFYIVYLI-----W--F-GEVAKLANK--A-GPQ-V-A-K-A-N-R-VL-AWFVFV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929707 [II-CFB-AAA027E17] PRGD_OTU205_32caf0d7a00a063bb395c47628d78d53 gb|KJ929707| PRGD_OTU205_32caf0d7a00a063bb395c47628d78d53, putative proteorhodopsin gene, partial cds. PRGD_OTU205_32caf0d7a00a063bb395c47628d78d53, putative proteorhodopsin gene, partial cds. KJ929707 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185) ATCTTAACCGTTCCATTGATGTGTGTAGAATTTTATTTAATCACCAAAAAAGCAGGTGCTAAAATTGCTTTGCTTTGGAAATTGATCTTCGCATCATTAGTGATGCTAGTAGCAGGTTATGTAGGTGAAGTTTTGGACAGAGATGGAAGTGTACTTTGGGGTGTTATCTCTGGTATCGGTTATTTCTACATTGTTTACCTAGTTTGGTTTGGAGAAGTATCAAAACTGGCTCAAACAGCAGGTGCACAAGTTGCCAAAGCTACAAAAGTGCTTGGTTGGTTTGTTCTTGTA ILTVPLMCVEFYLITKKAGAKIALLWKLIFASLVMLVAGYVGEVLDRDGSVLWGVISGIGYFYIVYLVWFGEVSKLAQTAGAQVAKATKVLGWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAACCGTTCCATTGATGTGTGTAGAATTTTATTTAATCACCAAAAAA---------GCA------GGTGCTAAAATT---GCTTTG------------------------------------CTTTGGAAA---TTGATCTTCGCATCATTAGTGATGCTAGTAGCAGGTTATGTAGGTGAA---------GTT------------------TTG------GACAGA------------------------------------------------------------------------------------------------GATGGAAGT------------------GTACTTTGG---GGTGTTATCTCTGGTATCGGTTATTTCTACATTGTTTACCTAGTT---------------TGG------TTT---GGAGAAGTATCAAAACTGGCTCAAACA------GCA---GGTGCACAA---GTT---GCC---AAA---GCT---ACA---AAA---GTGCTT---GGTTGGTTTGTTCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLITKK---A--GAKI-AL------------LWK-LIFASLVMLVAGYVGE---V------L--DR--------------------------------DGS------VLW-GVISGIGYFYIVYLV-----W--F-GEVSKLAQT--A-GAQ-V-A-K-A-T-K-VL-GWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB-AAA027E17]_KJ929706 [II-CFB-AAA027E17] PRGD_OTU205_otuREP_3758bd752b26aed03bf272280c063006 gb|KJ929706| PRGD_OTU205_otuREP_3758bd752b26aed03bf272280c063006, putative proteorhodopsin gene, partial cds. PRGD_OTU205_otuREP_3758bd752b26aed03bf272280c063006, putative proteorhodopsin gene, partial cds. KJ929706 [[proteorhodopsin super-cluster II/CFB-like cluster/SGCG_AAA027E17 Bacteroidetes-like subcluster]] proteorhodopsin super-cluster II CFB-like cluster SGCG_AAA027E17 Bacteroidetes-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185) ATCTTAACTGTTCCATTGATGTGTGTAGAGTTTTATTTAATCACTAAAAAAGCAGGTGCTAAAATTGCGTTGCTTTGGAAATTGATCTTCGCTTCACTAGTAATGCTAGTAACAGGTTACGTTGGTGAAGTATTGGACAGAGACGGTAGTGTACTTTGGGGTGTTATCTCTGGTATTGCTTACTTCTACATCGTTTACTTAGTATGGTTTGGAGAAGTTTCTAAACTTGCTCAAACTGCAGGTGCTCAGGTTGCAAAAGCAACAAAAGTACTTGGTTGGTTTGTTCTAGTA ILTVPLMCVEFYLITKKAGAKIALLWKLIFASLVMLVTGYVGEVLDRDGSVLWGVISGIAYFYIVYLVWFGEVSKLAQTAGAQVAKATKVLGWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAACTGTTCCATTGATGTGTGTAGAGTTTTATTTAATCACTAAAAAA---------GCA------GGTGCTAAAATT---GCGTTG------------------------------------CTTTGGAAA---TTGATCTTCGCTTCACTAGTAATGCTAGTAACAGGTTACGTTGGTGAA---------GTA------------------TTG------GACAGA------------------------------------------------------------------------------------------------GACGGTAGT------------------GTACTTTGG---GGTGTTATCTCTGGTATTGCTTACTTCTACATCGTTTACTTAGTA---------------TGG------TTT---GGAGAAGTTTCTAAACTTGCTCAAACT------GCA---GGTGCTCAG---GTT---GCA---AAA---GCA---ACA---AAA---GTACTT---GGTTGGTTTGTTCTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLITKK---A--GAKI-AL------------LWK-LIFASLVMLVTGYVGE---V------L--DR--------------------------------DGS------VLW-GVISGIAYFYIVYLV-----W--F-GEVSKLAQT--A-GAQ-V-A-K-A-T-K-VL-GWFVLV-------------------------------------------------------------------------------------------------------------------------------- [II-CFB]_KJ929332 [II-CFB] PRGD_OTU106_otuREP_f1894785d1d86029fe2ad2a9f50efe26 gb|KJ929332| PRGD_OTU106_otuREP_f1894785d1d86029fe2ad2a9f50efe26, putative proteorhodopsin gene, partial cds. PRGD_OTU106_otuREP_f1894785d1d86029fe2ad2a9f50efe26, putative proteorhodopsin gene, partial cds. KJ929332 [[proteorhodopsin super-cluster II/CFB-like cluster]] proteorhodopsin super-cluster II CFB-like cluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45; -33.28, 45.35) TTAATTACTGTTCCATTATTAATTATTGAATTTTATATAATTTTAAGAGCAGTGACCGATACTCCACCACGTGTATTTGTTAAGCTTTTGGTTGGATCTTTAGTAATGTTAATATTTGGATATTTTGGTGAATCTGGATTAGTCTTTGGTGAGCCACTAGTACCTTTTATTATTGGAATGTTAGGTTGGATTTATATCATATATGAAATCTATGCCGGTGAAACTTCAGGACTCTCAAAAAGCATTAGCTCTGAATCAGTAAAATCTGCTTACAAAACAATGAGAAATATTGTGGTATTT LITVPLLIIEFYIILRAVTDTPPRVFVKLLVGSLVMLIFGYFGESGLVFGEPLVPFIIGMLGWIYIIYEIYAGETSGLSKSISSESVKSAYKTMRNIVVF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTTCCATTATTAATTATTGAATTTTATATAATTTTAAGAGCA---------GTG---ACCGATACTCCACCA---CGTGTA------------------------------------TTTGTTAAG---CTTTTGGTTGGATCTTTAGTAATGTTAATATTTGGATATTTTGGTGAA---------TCT------------------GGA------TTA---------------------------------GTC---------------------------------TTT---------------------------GGTGAGCCA------------------CTAGTACCT---TTTATTATTGGAATGTTAGGTTGGATTTATATCATATATGAAATC---------------TAT------GCC---GGTGAAACTTCAGGACTCTCAAAAAGC------ATT---AGCTCTGAATCAGTA---AAA---TCT---GCT---TAC---AAA---ACAATG---AGAAATATTGTGGTATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLIIEFYIILRA---V-TDTPP-RV------------FVK-LLVGSLVMLIFGYFGE---S------G--L-----------V-----------F---------GEP------LVP-FIIGMLGWIYIIYEI-----Y--A-GETSGLSKS--I-SSESV-K-S-A-Y-K-TM-RNIVVF-------------------------------------------------------------------------------------------------------------------------------- [II-CFB]_KJ929337 [II-CFB] PRGD_OTU106_f4c70b9f546c653146c66f24b1a2d88a gb|KJ929337| PRGD_OTU106_f4c70b9f546c653146c66f24b1a2d88a, putative proteorhodopsin gene, partial cds. PRGD_OTU106_f4c70b9f546c653146c66f24b1a2d88a, putative proteorhodopsin gene, partial cds. KJ929337 [[proteorhodopsin super-cluster II/CFB-like cluster]] proteorhodopsin super-cluster II CFB-like cluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTTCTAACTGTACCGTTACAGATTGTTGAATTTTATATAATTTTAAGAGCAGTGACCGATACTCCACCACGTGTATTTGTTAAGCTTTTGGTTGGATCTTTAGTAATGTTAATATTTGGATATTTTGGTGAATCTGGATTAGTCTTTGGTGAGCCACTAGTACCTTTTATTATTGGAATGTTAGGTTGGATTTATATCATATATGAAATCTATGCCGGTGAAACTTCAGGACTCTCAAAAAGCATTAGCTCTGAATCAGTAAAATCTGCTTACAAAACAATGAGAAATATTGTGGTATTT FLTVPLQIVEFYIILRAVTDTPPRVFVKLLVGSLVMLIFGYFGESGLVFGEPLVPFIIGMLGWIYIIYEIYAGETSGLSKSISSESVKSAYKTMRNIVVF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCTAACTGTACCGTTACAGATTGTTGAATTTTATATAATTTTAAGAGCA---------GTG---ACCGATACTCCACCA---CGTGTA------------------------------------TTTGTTAAG---CTTTTGGTTGGATCTTTAGTAATGTTAATATTTGGATATTTTGGTGAA---------TCT------------------GGA------TTA---------------------------------GTC---------------------------------TTT---------------------------GGTGAGCCA------------------CTAGTACCT---TTTATTATTGGAATGTTAGGTTGGATTTATATCATATATGAAATC---------------TAT------GCC---GGTGAAACTTCAGGACTCTCAAAAAGC------ATT---AGCTCTGAATCAGTA---AAA---TCT---GCT---TAC---AAA---ACAATG---AGAAATATTGTGGTATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FLTVPLQIVEFYIILRA---V-TDTPP-RV------------FVK-LLVGSLVMLIFGYFGE---S------G--L-----------V-----------F---------GEP------LVP-FIIGMLGWIYIIYEI-----Y--A-GETSGLSKS--I-SSESV-K-S-A-Y-K-TM-RNIVVF-------------------------------------------------------------------------------------------------------------------------------- [II-CFB]_KJ929336 [II-CFB] PRGD_OTU106_d110cf36f12af7cdd3b7c435a50e2290 gb|KJ929336| PRGD_OTU106_d110cf36f12af7cdd3b7c435a50e2290, putative proteorhodopsin gene, partial cds. PRGD_OTU106_d110cf36f12af7cdd3b7c435a50e2290, putative proteorhodopsin gene, partial cds. KJ929336 [[proteorhodopsin super-cluster II/CFB-like cluster]] proteorhodopsin super-cluster II CFB-like cluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-33.28, 45.35) TTAATTACCGTTCCATTATTAATTATTGAATTTTATATAATTTTAAGAGCAGTGACCGATACCCCACCACGTGTATTTGTTAAGCTTTTGGTTGGATCTTTAGTAATGTTAATATTCGGATATTTTGGTGAATCAGGATTAGTCTTTGGTGAACCACTAGTACCTTTTATTATTGGAATGTTAGGTTGGATTTATATCATATATGAAATCTATGCCGGTGAAACTTCAGGACTCTCAAAAAGCATTAGCTCTGAATCAGTAAAATCTGCTTATAAAACAATGAGAAATATTGTGGTATTT LITVPLLIIEFYIILRAVTDTPPRVFVKLLVGSLVMLIFGYFGESGLVFGEPLVPFIIGMLGWIYIIYEIYAGETSGLSKSISSESVKSAYKTMRNIVVF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACCGTTCCATTATTAATTATTGAATTTTATATAATTTTAAGAGCA---------GTG---ACCGATACCCCACCA---CGTGTA------------------------------------TTTGTTAAG---CTTTTGGTTGGATCTTTAGTAATGTTAATATTCGGATATTTTGGTGAA---------TCA------------------GGA------TTA---------------------------------GTC---------------------------------TTT---------------------------GGTGAACCA------------------CTAGTACCT---TTTATTATTGGAATGTTAGGTTGGATTTATATCATATATGAAATC---------------TAT------GCC---GGTGAAACTTCAGGACTCTCAAAAAGC------ATT---AGCTCTGAATCAGTA---AAA---TCT---GCT---TAT---AAA---ACAATG---AGAAATATTGTGGTATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLIIEFYIILRA---V-TDTPP-RV------------FVK-LLVGSLVMLIFGYFGE---S------G--L-----------V-----------F---------GEP------LVP-FIIGMLGWIYIIYEI-----Y--A-GETSGLSKS--I-SSESV-K-S-A-Y-K-TM-RNIVVF-------------------------------------------------------------------------------------------------------------------------------- [II-CFB]_KJ929333 [II-CFB] PRGD_OTU106_213c20779a64030d791273212b4d1807 gb|KJ929333| PRGD_OTU106_213c20779a64030d791273212b4d1807, putative proteorhodopsin gene, partial cds. PRGD_OTU106_213c20779a64030d791273212b4d1807, putative proteorhodopsin gene, partial cds. KJ929333 [[proteorhodopsin super-cluster II/CFB-like cluster]] proteorhodopsin super-cluster II CFB-like cluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) TTAATTACTGTTCCATTATTAATTATTGAATTTTATATAATTTTAAGAGCAGTGACCGATACCCCACCACGTGTATTTGTTAAGCTTTTGGTTGGATCTTTAGTAATGTTAATATTCGGATATTTTGGTGAATCTGGACTAGTCTTCGGTGAGCCACTAGTACCTTTTATTATTGGAATGTTAGGTTGGATTTATATCATATATGAAATCTATGCCGGTGAAACTTCAGGACTCTCAAAAAGCATTAGCTCTGAATCAGTAAAATCTGCTTATAAAACAATGAGAAATATTGTGGTATTT LITVPLLIIEFYIILRAVTDTPPRVFVKLLVGSLVMLIFGYFGESGLVFGEPLVPFIIGMLGWIYIIYEIYAGETSGLSKSISSESVKSAYKTMRNIVVF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTTCCATTATTAATTATTGAATTTTATATAATTTTAAGAGCA---------GTG---ACCGATACCCCACCA---CGTGTA------------------------------------TTTGTTAAG---CTTTTGGTTGGATCTTTAGTAATGTTAATATTCGGATATTTTGGTGAA---------TCT------------------GGA------CTA---------------------------------GTC---------------------------------TTC---------------------------GGTGAGCCA------------------CTAGTACCT---TTTATTATTGGAATGTTAGGTTGGATTTATATCATATATGAAATC---------------TAT------GCC---GGTGAAACTTCAGGACTCTCAAAAAGC------ATT---AGCTCTGAATCAGTA---AAA---TCT---GCT---TAT---AAA---ACAATG---AGAAATATTGTGGTATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLIIEFYIILRA---V-TDTPP-RV------------FVK-LLVGSLVMLIFGYFGE---S------G--L-----------V-----------F---------GEP------LVP-FIIGMLGWIYIIYEI-----Y--A-GETSGLSKS--I-SSESV-K-S-A-Y-K-TM-RNIVVF-------------------------------------------------------------------------------------------------------------------------------- [II-CFB]_KJ929334 [II-CFB] PRGD_OTU106_68d68b8fb003cde25b08b9984605130c gb|KJ929334| PRGD_OTU106_68d68b8fb003cde25b08b9984605130c, putative proteorhodopsin gene, partial cds. PRGD_OTU106_68d68b8fb003cde25b08b9984605130c, putative proteorhodopsin gene, partial cds. KJ929334 [[proteorhodopsin super-cluster II/CFB-like cluster]] proteorhodopsin super-cluster II CFB-like cluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACTGTTCCATTATTAATTATTGAATTTTATATAATTTTAAGAGCAGTGACCGATACCCCACCACGTGTATTTGTTAAGCTTTTGGTTGGATCTTTAGTAATGTTAATATTCGGATATTTTGGTGAATCAGGATTAGTCTTTGGTGACCCACTAGTACCTTTTATTATTGGAATGTTAGGTTGGATTTATATCATTTATGAAATCTATGCCGGTGAAACTTCAGGTCTCTCAAAGAGTATAAGCTCTGAATCAGTAAAATCTGCTTATAAAACAATGAGAAATATTGTGGTATTT LITVPLLIIEFYIILRAVTDTPPRVFVKLLVGSLVMLIFGYFGESGLVFGDPLVPFIIGMLGWIYIIYEIYAGETSGLSKSISSESVKSAYKTMRNIVVF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTTCCATTATTAATTATTGAATTTTATATAATTTTAAGAGCA---------GTG---ACCGATACCCCACCA---CGTGTA------------------------------------TTTGTTAAG---CTTTTGGTTGGATCTTTAGTAATGTTAATATTCGGATATTTTGGTGAA---------TCA------------------GGA------TTA---------------------------------GTC---------------------------------TTT---------------------------GGTGACCCA------------------CTAGTACCT---TTTATTATTGGAATGTTAGGTTGGATTTATATCATTTATGAAATC---------------TAT------GCC---GGTGAAACTTCAGGTCTCTCAAAGAGT------ATA---AGCTCTGAATCAGTA---AAA---TCT---GCT---TAT---AAA---ACAATG---AGAAATATTGTGGTATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLIIEFYIILRA---V-TDTPP-RV------------FVK-LLVGSLVMLIFGYFGE---S------G--L-----------V-----------F---------GDP------LVP-FIIGMLGWIYIIYEI-----Y--A-GETSGLSKS--I-SSESV-K-S-A-Y-K-TM-RNIVVF-------------------------------------------------------------------------------------------------------------------------------- [II-CFB]_KJ929335 [II-CFB] PRGD_OTU106_d0acf665e06fb292267a27e78ba3b4e1 gb|KJ929335| PRGD_OTU106_d0acf665e06fb292267a27e78ba3b4e1, putative proteorhodopsin gene, partial cds. PRGD_OTU106_d0acf665e06fb292267a27e78ba3b4e1, putative proteorhodopsin gene, partial cds. KJ929335 [[proteorhodopsin super-cluster II/CFB-like cluster]] proteorhodopsin super-cluster II CFB-like cluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) TTAATTACCGTTCCATTATTAATTATTGAATTTTATATAATTTTAAGAGCAGTGACCGACACACCACCACGTGTATTTGTTAAGCTTTTAGTTGGATCTTTAGTAATGTTACTATTCGGATATTTTGGTGAATCTGGATTAGTCTTTGGTGAGCCACTAGTACCTTTTATTATTGGAATGTTAGGTTGGATTTATATCATATATGAAATCTATGCTGGTGAAACTTCAGGTCTATCAAAGAGTATAAGCTCTGAATCAGTTAAATCTGCTTATAAAACAATGAGGAATATTGTGGTATTT LITVPLLIIEFYIILRAVTDTPPRVFVKLLVGSLVMLLFGYFGESGLVFGEPLVPFIIGMLGWIYIIYEIYAGETSGLSKSISSESVKSAYKTMRNIVVF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACCGTTCCATTATTAATTATTGAATTTTATATAATTTTAAGAGCA---------GTG---ACCGACACACCACCA---CGTGTA------------------------------------TTTGTTAAG---CTTTTAGTTGGATCTTTAGTAATGTTACTATTCGGATATTTTGGTGAA---------TCT------------------GGA------TTA---------------------------------GTC---------------------------------TTT---------------------------GGTGAGCCA------------------CTAGTACCT---TTTATTATTGGAATGTTAGGTTGGATTTATATCATATATGAAATC---------------TAT------GCT---GGTGAAACTTCAGGTCTATCAAAGAGT------ATA---AGCTCTGAATCAGTT---AAA---TCT---GCT---TAT---AAA---ACAATG---AGGAATATTGTGGTATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLIIEFYIILRA---V-TDTPP-RV------------FVK-LLVGSLVMLLFGYFGE---S------G--L-----------V-----------F---------GEP------LVP-FIIGMLGWIYIIYEI-----Y--A-GETSGLSKS--I-SSESV-K-S-A-Y-K-TM-RNIVVF-------------------------------------------------------------------------------------------------------------------------------- [II-CFB]_KJ929877 [II-CFB] PRGD_OTU328_otuREP_e14a9f1560760754c237237446b871ee gb|KJ929877| PRGD_OTU328_otuREP_e14a9f1560760754c237237446b871ee, putative proteorhodopsin gene, partial cds. PRGD_OTU328_otuREP_e14a9f1560760754c237237446b871ee, putative proteorhodopsin gene, partial cds. KJ929877 [[proteorhodopsin super-cluster II/CFB-like cluster]] proteorhodopsin super-cluster II CFB-like cluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTTATTACGGTACCATTACAAATAATTGAATTTTATTTGATTTTAAAAATTATAGGTTCAACACCAATAAAGTTATTTTGGAAGCTATTAACAGCATCATTAATAATGTTGTTAGCAGGTTATATTGGAGAAGCGAGTATTGCGTCTGCATTTTATTCATTCCTTATTGGTATGTTTGCATGGTTATATATACTTTATGAGATATTTTTTGGTACAGGAGGTAAACTATTAGTTAGTGGCCAAAATCAATCAGCAAAAATGGCTTATATAAGTTTGAAATGGCTTGTAACTATT FITVPLQIIEFYLILKIIGSTPIKLFWKLLTASLIMLLAGYIGEASIASAFYSFLIGMFAWLYILYEIFFGTGGKLLVSGQNQSAKMAYISLKWLVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATTACGGTACCATTACAAATAATTGAATTTTATTTGATTTTAAAAATT---------ATA---GGTTCAACACCAATA---AAGTTA------------------------------------TTTTGGAAG---CTATTAACAGCATCATTAATAATGTTGTTAGCAGGTTATATTGGAGAA---------GCG------------------AGT------ATT---------------------------------GCG------------------------------------------------------------------TCTGCA------------------TTTTATTCA---TTCCTTATTGGTATGTTTGCATGGTTATATATACTTTATGAGATA---------------TTT------TTT---GGTACAGGAGGTAAACTATTAGTTAGT------GGC---CAAAATCAATCAGCA---AAA---ATG---GCT---TAT---ATA---AGTTTG---AAATGGCTTGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIIEFYLILKI---I-GSTPI-KL------------FWK-LLTASLIMLLAGYIGE---A------S--I-----------A----------------------SA------FYS-FLIGMFAWLYILYEI-----F--F-GTGGKLLVS--G-QNQSA-K-M-A-Y-I-SL-KWLVTI-------------------------------------------------------------------------------------------------------------------------------- [II]_KJ929828 [II] PRGD_OTU279_otuREP_0d612a366edbc5b64b57798c342b0425 gb|KJ929828| PRGD_OTU279_otuREP_0d612a366edbc5b64b57798c342b0425, putative proteorhodopsin gene, partial cds. PRGD_OTU279_otuREP_0d612a366edbc5b64b57798c342b0425, putative proteorhodopsin gene, partial cds. KJ929828 [[proteorhodopsin super-cluster II]] proteorhodopsin super-cluster II proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTAGTTACTGTTCCACTACAGATAGTTGAGTTTTACCTCATCTTGAAGGTTGTTGGAAAAGTTGGATCATCAGTGTTCTGGCAGTTATTAGCAGGTTCGCTAGTAATGTTAATTGGTGGTTTGATTGGAGAACTAGAATCTAGTTTAGATCTTGTTGGATTTATAATTGGAATGGTTGGTTGGGCATACGTTGTCTACCTAATCTTTGCCGGTGGCGCTGCTAAAGCAAGCGTTGAAGGTAAAAACGCTGCAGTACAGTCAGCTTTTAACTCTATGAAACTAATCGTATTAGTT LVTVPLQIVEFYLILKVVGKVGSSVFWQLLAGSLVMLIGGLIGELESSLDLVGFIIGMVGWAYVVYLIFAGGAAKASVEGKNAAVQSAFNSMKLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGTTACTGTTCCACTACAGATAGTTGAGTTTTACCTCATCTTGAAGGTT---------GTT---GGAAAAGTTGGATCA---TCAGTG------------------------------------TTCTGGCAG---TTATTAGCAGGTTCGCTAGTAATGTTAATTGGTGGTTTGATTGGAGAA---------CTA------------------GAA------TCT---------------------------------AGT------------------------------------------------------------------TTAGAT------------------CTTGTTGGA---TTTATAATTGGAATGGTTGGTTGGGCATACGTTGTCTACCTAATC---------------TTT------GCC---GGTGGCGCTGCTAAAGCAAGCGTTGAA------GGT---AAAAACGCTGCAGTA---CAG---TCA---GCT---TTT---AAC---TCTATG---AAACTAATCGTATTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVTVPLQIVEFYLILKV---V-GKVGS-SV------------FWQ-LLAGSLVMLIGGLIGE---L------E--S-----------S----------------------LD------LVG-FIIGMVGWAYVVYLI-----F--A-GGAAKASVE--G-KNAAV-Q-S-A-F-N-SM-KLIVLV-------------------------------------------------------------------------------------------------------------------------------- [II]_KJ929030 [II] PRGD_OTU069_3b47fcd05b11d70e33b43a1fe3b8c1aa gb|KJ929030| PRGD_OTU069_3b47fcd05b11d70e33b43a1fe3b8c1aa, putative proteorhodopsin gene, partial cds. PRGD_OTU069_3b47fcd05b11d70e33b43a1fe3b8c1aa, putative proteorhodopsin gene, partial cds. KJ929030 [[proteorhodopsin super-cluster II]] proteorhodopsin super-cluster II proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTAGTTACTGTTCCACTTCAAATAGTTGAGTTTTACCTCATCTTGAAAGTTGTTGGAAAAGTTAGTTCATCAGTATTCTGGCAACTATTAGTAGCATCAGTTGTTATGCTAGTTGGTGGATTCCTAGGTGAAACAGTTGATGGCTTCGAATTAATAGGATTTATTATTGGAATGGTTGGTTGGGCTGGAGTTGTCTACCTAATCTTTGCCGGTGGCGCTGCTAAAGCAAGCGTTGAAGGTAAAAACGCTGCAGTACAGTCAGCTTTTAATTCAATGAAACTAATCGTATTAGTT LVTVPLQIVEFYLILKVVGKVSSSVFWQLLVASVVMLVGGFLGETVDGFELIGFIIGMVGWAGVVYLIFAGGAAKASVEGKNAAVQSAFNSMKLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGTTACTGTTCCACTTCAAATAGTTGAGTTTTACCTCATCTTGAAAGTT---------GTT---GGAAAAGTTAGTTCA---TCAGTA------------------------------------TTCTGGCAA---CTATTAGTAGCATCAGTTGTTATGCTAGTTGGTGGATTCCTAGGTGAA---------ACA------------------GTT------GAT---------------------------------GGC------------------------------------------------------------------TTCGAA------------------TTAATAGGA---TTTATTATTGGAATGGTTGGTTGGGCTGGAGTTGTCTACCTAATC---------------TTT------GCC---GGTGGCGCTGCTAAAGCAAGCGTTGAA------GGT---AAAAACGCTGCAGTA---CAG---TCA---GCT---TTT---AAT---TCAATG---AAACTAATCGTATTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVTVPLQIVEFYLILKV---V-GKVSS-SV------------FWQ-LLVASVVMLVGGFLGE---T------V--D-----------G----------------------FE------LIG-FIIGMVGWAGVVYLI-----F--A-GGAAKASVE--G-KNAAV-Q-S-A-F-N-SM-KLIVLV-------------------------------------------------------------------------------------------------------------------------------- [II]_KJ929029 [II] PRGD_OTU069_35911f9ebd1703d061c0d6b1e7adfd8b gb|KJ929029| PRGD_OTU069_35911f9ebd1703d061c0d6b1e7adfd8b, putative proteorhodopsin gene, partial cds. PRGD_OTU069_35911f9ebd1703d061c0d6b1e7adfd8b, putative proteorhodopsin gene, partial cds. KJ929029 [[proteorhodopsin super-cluster II]] proteorhodopsin super-cluster II proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) TTAGTAACTGTTCCACTTCAAATAGTTGAGTTTTACCTCATCTTGAAAGTTGTTGGAAAAGTTAGTTCATCAGTATTCTGGCAACTATTAGTAGCATCAGTTGTTATGCTAGTTGGTGGATTCCTAGGTGAAACAGTTGATGGCTTTGAATTAATAGGATTCATTATTGGAATGGTTGGTTGGGCTGGAGTTGTCTATCTAATCTTTGCCGGTGGCGCTGCTAAAGCAAGCGTTGAAGGTAAAAACGCTGCAGTGCAGTCAGCTTTCAACTCTATGAAACTGATCGTATTAGTA LVTVPLQIVEFYLILKVVGKVSSSVFWQLLVASVVMLVGGFLGETVDGFELIGFIIGMVGWAGVVYLIFAGGAAKASVEGKNAAVQSAFNSMKLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGTAACTGTTCCACTTCAAATAGTTGAGTTTTACCTCATCTTGAAAGTT---------GTT---GGAAAAGTTAGTTCA---TCAGTA------------------------------------TTCTGGCAA---CTATTAGTAGCATCAGTTGTTATGCTAGTTGGTGGATTCCTAGGTGAA---------ACA------------------GTT------GAT---------------------------------GGC------------------------------------------------------------------TTTGAA------------------TTAATAGGA---TTCATTATTGGAATGGTTGGTTGGGCTGGAGTTGTCTATCTAATC---------------TTT------GCC---GGTGGCGCTGCTAAAGCAAGCGTTGAA------GGT---AAAAACGCTGCAGTG---CAG---TCA---GCT---TTC---AAC---TCTATG---AAACTGATCGTATTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVTVPLQIVEFYLILKV---V-GKVSS-SV------------FWQ-LLVASVVMLVGGFLGE---T------V--D-----------G----------------------FE------LIG-FIIGMVGWAGVVYLI-----F--A-GGAAKASVE--G-KNAAV-Q-S-A-F-N-SM-KLIVLV-------------------------------------------------------------------------------------------------------------------------------- [II]_KJ929032 [II] PRGD_OTU069_9333cbf00c27b502e0bf5c60039d2394 gb|KJ929032| PRGD_OTU069_9333cbf00c27b502e0bf5c60039d2394, putative proteorhodopsin gene, partial cds. PRGD_OTU069_9333cbf00c27b502e0bf5c60039d2394, putative proteorhodopsin gene, partial cds. KJ929032 [[proteorhodopsin super-cluster II]] proteorhodopsin super-cluster II proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTAGTAACTGTTCCACTTCAAATAGTTGAGTTTTACCTCATCTTGAAAGTTGTTGGAAAAGTTAGTTCATCAGTATTCTGGCAACTATTAGTAGCATCAGTTGTTATGCTAGTTGGTGGATTCCTAGGTGAAACAGTTGATGGCTTTGAATTAATAGGATTCATTATTGGAATGGTTGGTTGGGCTGGAGTTGTCTATCTAATTTTTGCCGGTGGTGCTGCTAAAGCAAGTGCTGAAGGTAAAAACGCTGCAGTGCAGTCAGCTTTCAACTCTATGAAACTGATCGTATTAGTA LVTVPLQIVEFYLILKVVGKVSSSVFWQLLVASVVMLVGGFLGETVDGFELIGFIIGMVGWAGVVYLIFAGGAAKASAEGKNAAVQSAFNSMKLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGTAACTGTTCCACTTCAAATAGTTGAGTTTTACCTCATCTTGAAAGTT---------GTT---GGAAAAGTTAGTTCA---TCAGTA------------------------------------TTCTGGCAA---CTATTAGTAGCATCAGTTGTTATGCTAGTTGGTGGATTCCTAGGTGAA---------ACA------------------GTT------GAT---------------------------------GGC------------------------------------------------------------------TTTGAA------------------TTAATAGGA---TTCATTATTGGAATGGTTGGTTGGGCTGGAGTTGTCTATCTAATT---------------TTT------GCC---GGTGGTGCTGCTAAAGCAAGTGCTGAA------GGT---AAAAACGCTGCAGTG---CAG---TCA---GCT---TTC---AAC---TCTATG---AAACTGATCGTATTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVTVPLQIVEFYLILKV---V-GKVSS-SV------------FWQ-LLVASVVMLVGGFLGE---T------V--D-----------G----------------------FE------LIG-FIIGMVGWAGVVYLI-----F--A-GGAAKASAE--G-KNAAV-Q-S-A-F-N-SM-KLIVLV-------------------------------------------------------------------------------------------------------------------------------- [II]_KJ929035 [II] PRGD_OTU069_e3896754f67c6bfd9bbb71a2e3c942c7 gb|KJ929035| PRGD_OTU069_e3896754f67c6bfd9bbb71a2e3c942c7, putative proteorhodopsin gene, partial cds. PRGD_OTU069_e3896754f67c6bfd9bbb71a2e3c942c7, putative proteorhodopsin gene, partial cds. KJ929035 [[proteorhodopsin super-cluster II]] proteorhodopsin super-cluster II proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (69.5142, -133.4185), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTAGTAACTGTTCCGCTTCAAATAGTTGAGTTTTACCTCATCTTGAAAGTTGTTGGAAAAGTTAGCTCATCAGTATTCTGGCAACTATTAGTAGCATCAGTTGTTATGCTAGTTGGTGGATTACTAGGTGAAACAGTTGATGGCTTCGAATTAATAGGATTCATTATTGGAATGGTTGGTTGGGCTGGAGTTGTCTATCTAATTTTTGCTGGTGGTGCTGCTAAATCAAGCGCTGAAAGTAAAAACGCTGCAGTACAATCAGCTTTCAATTCTATGAAACTGATCGTATTAGTT LVTVPLQIVEFYLILKVVGKVSSSVFWQLLVASVVMLVGGLLGETVDGFELIGFIIGMVGWAGVVYLIFAGGAAKSSAESKNAAVQSAFNSMKLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGTAACTGTTCCGCTTCAAATAGTTGAGTTTTACCTCATCTTGAAAGTT---------GTT---GGAAAAGTTAGCTCA---TCAGTA------------------------------------TTCTGGCAA---CTATTAGTAGCATCAGTTGTTATGCTAGTTGGTGGATTACTAGGTGAA---------ACA------------------GTT------GAT---------------------------------GGC------------------------------------------------------------------TTCGAA------------------TTAATAGGA---TTCATTATTGGAATGGTTGGTTGGGCTGGAGTTGTCTATCTAATT---------------TTT------GCT---GGTGGTGCTGCTAAATCAAGCGCTGAA------AGT---AAAAACGCTGCAGTA---CAA---TCA---GCT---TTC---AAT---TCTATG---AAACTGATCGTATTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVTVPLQIVEFYLILKV---V-GKVSS-SV------------FWQ-LLVASVVMLVGGLLGE---T------V--D-----------G----------------------FE------LIG-FIIGMVGWAGVVYLI-----F--A-GGAAKSSAE--S-KNAAV-Q-S-A-F-N-SM-KLIVLV-------------------------------------------------------------------------------------------------------------------------------- [II]_KJ929026 [II] PRGD_OTU069_0bf53bb2f3253e5b56ab7362fea03df2 gb|KJ929026| PRGD_OTU069_0bf53bb2f3253e5b56ab7362fea03df2, putative proteorhodopsin gene, partial cds. PRGD_OTU069_0bf53bb2f3253e5b56ab7362fea03df2, putative proteorhodopsin gene, partial cds. KJ929026 [[proteorhodopsin super-cluster II]] proteorhodopsin super-cluster II proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGGTAACTGTTCCACTACAAATAGTTGAGTTTTACCTCATCTTGAAAGTTGTTGGAAAAGTTAGCTCGTCAGTATTCTGGCAACTATTAGTAGCATCAGTTGTTATGCTAGTTGGTGGATTACTTGGTGAAACAGTAACAGACTTTGAATTAATAGGATTCATTATTGGAATGGTTGGTTGGGCTGGAGTTGTCTATCTAATTTTTGCTGGTGGTGCTGCTAAAGCAAGCGCTGATGGCAAAAACGCTGCAGTACAGTCAGCTTTCAATTCTATGAAACTAATCGTATTAGTT LVTVPLQIVEFYLILKVVGKVSSSVFWQLLVASVVMLVGGLLGETVTDFELIGFIIGMVGWAGVVYLIFAGGAAKASADGKNAAVQSAFNSMKLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGTAACTGTTCCACTACAAATAGTTGAGTTTTACCTCATCTTGAAAGTT---------GTT---GGAAAAGTTAGCTCG---TCAGTA------------------------------------TTCTGGCAA---CTATTAGTAGCATCAGTTGTTATGCTAGTTGGTGGATTACTTGGTGAA---------ACA------------------GTA------ACA---------------------------------GAC------------------------------------------------------------------TTTGAA------------------TTAATAGGA---TTCATTATTGGAATGGTTGGTTGGGCTGGAGTTGTCTATCTAATT---------------TTT------GCT---GGTGGTGCTGCTAAAGCAAGCGCTGAT------GGC---AAAAACGCTGCAGTA---CAG---TCA---GCT---TTC---AAT---TCTATG---AAACTAATCGTATTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVTVPLQIVEFYLILKV---V-GKVSS-SV------------FWQ-LLVASVVMLVGGLLGE---T------V--T-----------D----------------------FE------LIG-FIIGMVGWAGVVYLI-----F--A-GGAAKASAD--G-KNAAV-Q-S-A-F-N-SM-KLIVLV-------------------------------------------------------------------------------------------------------------------------------- [II]_KJ929034 [II] PRGD_OTU069_c0463ca4e432be842477c355c3fa38ca gb|KJ929034| PRGD_OTU069_c0463ca4e432be842477c355c3fa38ca, putative proteorhodopsin gene, partial cds. PRGD_OTU069_c0463ca4e432be842477c355c3fa38ca, putative proteorhodopsin gene, partial cds. KJ929034 [[proteorhodopsin super-cluster II]] proteorhodopsin super-cluster II proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) TTGGTAACTGTTCCACTACAAATAGTTGAGTTTTACCTCATCTTGAAAGTTGTTGGAAAAGTTAGCTCGTCAGTATTCTGGCAACTATTAGTAGCATCAGTTGTTATGCTAGTTGGTGGATTACTTGGTGAAACTGTTGATGGCTTCGAATTAATAGGATTCATTATTGGAATGGTTGGTTGGGCTGGAGTTGTCTATCTAATTTTTGCTGGTGGTGCTGCTAAAGCAAGCGCTGATGGCAAAAACGCTGCAGTACAGTCAGCTTTCAATTCTATGAAACTAATCGTATTAGTT LVTVPLQIVEFYLILKVVGKVSSSVFWQLLVASVVMLVGGLLGETVDGFELIGFIIGMVGWAGVVYLIFAGGAAKASADGKNAAVQSAFNSMKLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGTAACTGTTCCACTACAAATAGTTGAGTTTTACCTCATCTTGAAAGTT---------GTT---GGAAAAGTTAGCTCG---TCAGTA------------------------------------TTCTGGCAA---CTATTAGTAGCATCAGTTGTTATGCTAGTTGGTGGATTACTTGGTGAA---------ACT------------------GTT------GAT---------------------------------GGC------------------------------------------------------------------TTCGAA------------------TTAATAGGA---TTCATTATTGGAATGGTTGGTTGGGCTGGAGTTGTCTATCTAATT---------------TTT------GCT---GGTGGTGCTGCTAAAGCAAGCGCTGAT------GGC---AAAAACGCTGCAGTA---CAG---TCA---GCT---TTC---AAT---TCTATG---AAACTAATCGTATTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVTVPLQIVEFYLILKV---V-GKVSS-SV------------FWQ-LLVASVVMLVGGLLGE---T------V--D-----------G----------------------FE------LIG-FIIGMVGWAGVVYLI-----F--A-GGAAKASAD--G-KNAAV-Q-S-A-F-N-SM-KLIVLV-------------------------------------------------------------------------------------------------------------------------------- [II]_KJ929027 [II] PRGD_OTU069_18171df6b906625c73cb9fe2d52be05b gb|KJ929027| PRGD_OTU069_18171df6b906625c73cb9fe2d52be05b, putative proteorhodopsin gene, partial cds. PRGD_OTU069_18171df6b906625c73cb9fe2d52be05b, putative proteorhodopsin gene, partial cds. KJ929027 [[proteorhodopsin super-cluster II]] proteorhodopsin super-cluster II proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) TTAGTAACTGTTCCACTACAGATAGTTGAGTTTTACCTCATCTTGAAAGTTGTTGGTAAAGTTACTTCTACAGTATTCTGGCAATTATTAGCAGCATCAGTTGTTATGTTAATTGGTGGACTACTTGGAGAAACAGTTACAGACTTTGAACTAATAGGATTTATTATTGGAATGTTAGGTTGGGCTTACGTTGTATTCTTAATATTTGCTGGAGGCGCTGCTAAAGCAAACGCTGAAAGTAAGAATGCAGCTGTAGCATCAGCTTTTAATTCTATGAAGCTAATTGTGTTAGTT LVTVPLQIVEFYLILKVVGKVTSTVFWQLLAASVVMLIGGLLGETVTDFELIGFIIGMLGWAYVVFLIFAGGAAKANAESKNAAVASAFNSMKLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGTAACTGTTCCACTACAGATAGTTGAGTTTTACCTCATCTTGAAAGTT---------GTT---GGTAAAGTTACTTCT---ACAGTA------------------------------------TTCTGGCAA---TTATTAGCAGCATCAGTTGTTATGTTAATTGGTGGACTACTTGGAGAA---------ACA------------------GTT------ACA---------------------------------GAC------------------------------------------------------------------TTTGAA------------------CTAATAGGA---TTTATTATTGGAATGTTAGGTTGGGCTTACGTTGTATTCTTAATA---------------TTT------GCT---GGAGGCGCTGCTAAAGCAAACGCTGAA------AGT---AAGAATGCAGCTGTA---GCA---TCA---GCT---TTT---AAT---TCTATG---AAGCTAATTGTGTTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVTVPLQIVEFYLILKV---V-GKVTS-TV------------FWQ-LLAASVVMLIGGLLGE---T------V--T-----------D----------------------FE------LIG-FIIGMLGWAYVVFLI-----F--A-GGAAKANAE--S-KNAAV-A-S-A-F-N-SM-KLIVLV-------------------------------------------------------------------------------------------------------------------------------- [II]_KJ929033 [II] PRGD_OTU069_9d48ce78014bdf6e89f9718c497b8178 gb|KJ929033| PRGD_OTU069_9d48ce78014bdf6e89f9718c497b8178, putative proteorhodopsin gene, partial cds. PRGD_OTU069_9d48ce78014bdf6e89f9718c497b8178, putative proteorhodopsin gene, partial cds. KJ929033 [[proteorhodopsin super-cluster II]] proteorhodopsin super-cluster II proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) TTAGTAACTGTTCCACTACAGATAGTTGAGTTCTACCTCATCTTGAAAGTTGTTGGCAAAGTTACTTCTTCTGTATTCTGGCAATTATTAGCAGCATCAGTTGTTATGTTAATTGGTGGATTACTTGGAGAAACAGTTACAGACTTTGAATTAATAGGTTTCATTATTGGAATGGTCGGTTGGGCTTACGTAGTATTCTTAATATTTGCTGGAGGCGCTGCTAAAGCAAGTGCTGAAAGTAAGAATGCAGCTGTAGCATCAGCTTTCAATTCTATGAAGCTAATTGTGTTAGTA LVTVPLQIVEFYLILKVVGKVTSSVFWQLLAASVVMLIGGLLGETVTDFELIGFIIGMVGWAYVVFLIFAGGAAKASAESKNAAVASAFNSMKLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGTAACTGTTCCACTACAGATAGTTGAGTTCTACCTCATCTTGAAAGTT---------GTT---GGCAAAGTTACTTCT---TCTGTA------------------------------------TTCTGGCAA---TTATTAGCAGCATCAGTTGTTATGTTAATTGGTGGATTACTTGGAGAA---------ACA------------------GTT------ACA---------------------------------GAC------------------------------------------------------------------TTTGAA------------------TTAATAGGT---TTCATTATTGGAATGGTCGGTTGGGCTTACGTAGTATTCTTAATA---------------TTT------GCT---GGAGGCGCTGCTAAAGCAAGTGCTGAA------AGT---AAGAATGCAGCTGTA---GCA---TCA---GCT---TTC---AAT---TCTATG---AAGCTAATTGTGTTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVTVPLQIVEFYLILKV---V-GKVTS-SV------------FWQ-LLAASVVMLIGGLLGE---T------V--T-----------D----------------------FE------LIG-FIIGMVGWAYVVFLI-----F--A-GGAAKASAE--S-KNAAV-A-S-A-F-N-SM-KLIVLV-------------------------------------------------------------------------------------------------------------------------------- [II]_KJ929028 [II] PRGD_OTU069_1fd0eb2f829f59beeb9e9b8ba4cc62c9 gb|KJ929028| PRGD_OTU069_1fd0eb2f829f59beeb9e9b8ba4cc62c9, putative proteorhodopsin gene, partial cds. PRGD_OTU069_1fd0eb2f829f59beeb9e9b8ba4cc62c9, putative proteorhodopsin gene, partial cds. KJ929028 [[proteorhodopsin super-cluster II]] proteorhodopsin super-cluster II proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) TTAGTAACTGTTCCACTACAGATAGTTGAGTTTTACCTCATCTTGAAAGTTGTTGGCAAGGTTACTTCTTCTGTGTTCTGGCAATTATTAGCAGCATCAGTTGTTATGTTAGTTGGTGGATTACTCGGAGAAACAGTTGATGGCTTCGAACTTATAGGTTTCATTATTGGAATGATAGGTTGGGCTTACGTAGTATTCTTAATATTTGCTGGAGGCGCTGCTAAAGCAAACGCTGAAAGTAAGAATGCAGCTGTAGCATCTGCTTTCAATTCAATGAAGCTAATTGTGTTAGTA LVTVPLQIVEFYLILKVVGKVTSSVFWQLLAASVVMLVGGLLGETVDGFELIGFIIGMIGWAYVVFLIFAGGAAKANAESKNAAVASAFNSMKLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGTAACTGTTCCACTACAGATAGTTGAGTTTTACCTCATCTTGAAAGTT---------GTT---GGCAAGGTTACTTCT---TCTGTG------------------------------------TTCTGGCAA---TTATTAGCAGCATCAGTTGTTATGTTAGTTGGTGGATTACTCGGAGAA---------ACA------------------GTT------GAT---------------------------------GGC------------------------------------------------------------------TTCGAA------------------CTTATAGGT---TTCATTATTGGAATGATAGGTTGGGCTTACGTAGTATTCTTAATA---------------TTT------GCT---GGAGGCGCTGCTAAAGCAAACGCTGAA------AGT---AAGAATGCAGCTGTA---GCA---TCT---GCT---TTC---AAT---TCAATG---AAGCTAATTGTGTTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVTVPLQIVEFYLILKV---V-GKVTS-SV------------FWQ-LLAASVVMLVGGLLGE---T------V--D-----------G----------------------FE------LIG-FIIGMIGWAYVVFLI-----F--A-GGAAKANAE--S-KNAAV-A-S-A-F-N-SM-KLIVLV-------------------------------------------------------------------------------------------------------------------------------- [II]_KJ929031 [II] PRGD_OTU069_7bb03aa77a16ace4c1df5f5155cef512 gb|KJ929031| PRGD_OTU069_7bb03aa77a16ace4c1df5f5155cef512, putative proteorhodopsin gene, partial cds. PRGD_OTU069_7bb03aa77a16ace4c1df5f5155cef512, putative proteorhodopsin gene, partial cds. KJ929031 [[proteorhodopsin super-cluster II]] proteorhodopsin super-cluster II proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAGTAACTGTTCCACTACAGATAGTTGAGTTTTACCTCATCTTGAAAGTTGTTGGCAAGGTTACTTCTTCTGTGTTCTGGCAATTATTAGCAGCATCAGTTGTTATGTTAGTTGGTGGATTACTCGGAGAAACAGTTGATGGCTTCGAACTTATAGGTTTCATTATTGGAATGTTAGGTTGGGCTTACGTAGTATTCTTAATATTTGCTGGAGGCGCTGCTAAAGCAAACGCTGAAAGTAAGAATGCAGCTGTAGCTTCAGCTTTCAATTCAATGAAGCTAATTGTGTTAGTA LVTVPLQIVEFYLILKVVGKVTSSVFWQLLAASVVMLVGGLLGETVDGFELIGFIIGMLGWAYVVFLIFAGGAAKANAESKNAAVASAFNSMKLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGTAACTGTTCCACTACAGATAGTTGAGTTTTACCTCATCTTGAAAGTT---------GTT---GGCAAGGTTACTTCT---TCTGTG------------------------------------TTCTGGCAA---TTATTAGCAGCATCAGTTGTTATGTTAGTTGGTGGATTACTCGGAGAA---------ACA------------------GTT------GAT---------------------------------GGC------------------------------------------------------------------TTCGAA------------------CTTATAGGT---TTCATTATTGGAATGTTAGGTTGGGCTTACGTAGTATTCTTAATA---------------TTT------GCT---GGAGGCGCTGCTAAAGCAAACGCTGAA------AGT---AAGAATGCAGCTGTA---GCT---TCA---GCT---TTC---AAT---TCAATG---AAGCTAATTGTGTTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVTVPLQIVEFYLILKV---V-GKVTS-SV------------FWQ-LLAASVVMLVGGLLGE---T------V--D-----------G----------------------FE------LIG-FIIGMLGWAYVVFLI-----F--A-GGAAKANAE--S-KNAAV-A-S-A-F-N-SM-KLIVLV-------------------------------------------------------------------------------------------------------------------------------- [II]_KJ929025 [II] PRGD_OTU069_otuREP_cebd4d4e18e507192605e3bfc07f2aa7 gb|KJ929025| PRGD_OTU069_otuREP_cebd4d4e18e507192605e3bfc07f2aa7, putative proteorhodopsin gene, partial cds. PRGD_OTU069_otuREP_cebd4d4e18e507192605e3bfc07f2aa7, putative proteorhodopsin gene, partial cds. KJ929025 [[proteorhodopsin super-cluster II]] proteorhodopsin super-cluster II proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAGTAACTGTTCCACTACAAATAGTTGAGTTCTACCTCATCTTGAAAGTTGTTGGAAAAGTTACTTCTTCTGTATTCTGGCAATTATTAACAGCATCAGTTGTTATGTTAATTGGTGGACTACTTGGAGAAACAGTTGATGGCTTCGAATTAATAGGTTTCATTATTGGAATGTTAGGTTGGGCTTACGTTGTATTCTTAATATTTGCTGGAGGTGCTGCTAAGGCAAGCGCTGAAAGTAAGAATGCAGCTGTAACATCAGCTTTCAATTCAATGAAGCTAATTGTGCTAGTT LVTVPLQIVEFYLILKVVGKVTSSVFWQLLTASVVMLIGGLLGETVDGFELIGFIIGMLGWAYVVFLIFAGGAAKASAESKNAAVTSAFNSMKLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGTAACTGTTCCACTACAAATAGTTGAGTTCTACCTCATCTTGAAAGTT---------GTT---GGAAAAGTTACTTCT---TCTGTA------------------------------------TTCTGGCAA---TTATTAACAGCATCAGTTGTTATGTTAATTGGTGGACTACTTGGAGAA---------ACA------------------GTT------GAT---------------------------------GGC------------------------------------------------------------------TTCGAA------------------TTAATAGGT---TTCATTATTGGAATGTTAGGTTGGGCTTACGTTGTATTCTTAATA---------------TTT------GCT---GGAGGTGCTGCTAAGGCAAGCGCTGAA------AGT---AAGAATGCAGCTGTA---ACA---TCA---GCT---TTC---AAT---TCAATG---AAGCTAATTGTGCTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVTVPLQIVEFYLILKV---V-GKVTS-SV------------FWQ-LLTASVVMLIGGLLGE---T------V--D-----------G----------------------FE------LIG-FIIGMLGWAYVVFLI-----F--A-GGAAKASAE--S-KNAAV-T-S-A-F-N-SM-KLIVLV-------------------------------------------------------------------------------------------------------------------------------- [II]_KJ929036 [II] PRGD_OTU069_f7434f0b8b35e1064e29b9e92dbc9a9e gb|KJ929036| PRGD_OTU069_f7434f0b8b35e1064e29b9e92dbc9a9e, putative proteorhodopsin gene, partial cds. PRGD_OTU069_f7434f0b8b35e1064e29b9e92dbc9a9e, putative proteorhodopsin gene, partial cds. KJ929036 [[proteorhodopsin super-cluster II]] proteorhodopsin super-cluster II proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTAGTAACTGTTCCACTACAAATAGTTGAGTTTTACCTCATCTTGAAAGTTGTTGGAAAGGTTACTTCTTCTGTATTCTGGCAATTATTAACAGCATCAGTTGTTATGTTAGTTGGTGGACTACTTGGAGAAACAGTTGATGGCTTCGAATTAATAGGTTTCATTATTGGAATGTTAGGTTGGGCTTACGTTGTATTCTTAATATTTGCTGGAGGTGCTGCTAAGGCAAGCGCTGAAAGTAAGAATGCAGCTGTAACATCAGCTTTCAATTCAATGAAGCTAATTGTGCTAGTT LVTVPLQIVEFYLILKVVGKVTSSVFWQLLTASVVMLVGGLLGETVDGFELIGFIIGMLGWAYVVFLIFAGGAAKASAESKNAAVTSAFNSMKLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGTAACTGTTCCACTACAAATAGTTGAGTTTTACCTCATCTTGAAAGTT---------GTT---GGAAAGGTTACTTCT---TCTGTA------------------------------------TTCTGGCAA---TTATTAACAGCATCAGTTGTTATGTTAGTTGGTGGACTACTTGGAGAA---------ACA------------------GTT------GAT---------------------------------GGC------------------------------------------------------------------TTCGAA------------------TTAATAGGT---TTCATTATTGGAATGTTAGGTTGGGCTTACGTTGTATTCTTAATA---------------TTT------GCT---GGAGGTGCTGCTAAGGCAAGCGCTGAA------AGT---AAGAATGCAGCTGTA---ACA---TCA---GCT---TTC---AAT---TCAATG---AAGCTAATTGTGCTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVTVPLQIVEFYLILKV---V-GKVTS-SV------------FWQ-LLTASVVMLVGGLLGE---T------V--D-----------G----------------------FE------LIG-FIIGMLGWAYVVFLI-----F--A-GGAAKASAE--S-KNAAV-T-S-A-F-N-SM-KLIVLV-------------------------------------------------------------------------------------------------------------------------------- [II]_KJ929887 [II] PRGD_OTU338_otuREP_64f6afbc100cde3350386bcdc10fdcf5 gb|KJ929887| PRGD_OTU338_otuREP_64f6afbc100cde3350386bcdc10fdcf5, putative proteorhodopsin gene, partial cds. PRGD_OTU338_otuREP_64f6afbc100cde3350386bcdc10fdcf5, putative proteorhodopsin gene, partial cds. KJ929887 [[proteorhodopsin super-cluster II]] proteorhodopsin super-cluster II proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (73.9992, 19.2097), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTGATTACGGTCCCACTTCAAATTATCGAGTTTTATCTTATTCTTTCAGCGGTAACTAAAGTTAAAGCCTCACTATTTTGGCAACTTCTTGTAGCCTCACTAGTAATGTTAGTTGGAGGTTACCTCGGTGAGGCAGGATACATCGATAGGATGCCAGGCTTTATAATCGGGATGTTGGGTTGGGCTGGTGTTATTTACTTAATTTTCGCTGGTGAGGCTGCCAAAGTGAATACCAGTAGCGACAACTCAGCTGGGCAAAAAGCTTTCAACTATCTAAGATTGATTGTTTTAGTT LITVPLQIIEFYLILSAVTKVKASLFWQLLVASLVMLVGGYLGEAGYIDRMPGFIIGMLGWAGVIYLIFAGEAAKVNTSSDNSAGQKAFNYLRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACGGTCCCACTTCAAATTATCGAGTTTTATCTTATTCTTTCAGCG---------GTA---ACTAAAGTTAAAGCC---TCACTA------------------------------------TTTTGGCAA---CTTCTTGTAGCCTCACTAGTAATGTTAGTTGGAGGTTACCTCGGTGAG---------GCA------------------GGA------TAC---------------------------------ATC------------------------------------------------------------------GATAGG------------------ATGCCAGGC---TTTATAATCGGGATGTTGGGTTGGGCTGGTGTTATTTACTTAATT---------------TTC------GCT---GGTGAGGCTGCCAAAGTGAATACCAGT------AGC---GACAACTCAGCTGGG---CAA---AAA---GCT---TTC---AAC---TATCTA---AGATTGATTGTTTTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLILSA---V-TKVKA-SL------------FWQ-LLVASLVMLVGGYLGE---A------G--Y-----------I----------------------DR------MPG-FIIGMLGWAGVIYLI-----F--A-GEAAKVNTS--S-DNSAG-Q-K-A-F-N-YL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [II]_KJ929677 [II] PRGD_OTU191_otuREP_305ecc8270f5f07fe002aadfa8146d29 gb|KJ929677| PRGD_OTU191_otuREP_305ecc8270f5f07fe002aadfa8146d29, putative proteorhodopsin gene, partial cds. PRGD_OTU191_otuREP_305ecc8270f5f07fe002aadfa8146d29, putative proteorhodopsin gene, partial cds. KJ929677 [[proteorhodopsin super-cluster II]] proteorhodopsin super-cluster II proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185), Mediterranean Sea (33.762, 29.175) TTAATCACTGTGCCTCTACAAATTGTAGAATTCTATCTTATCCTTGCAGCGGTAACTGTAGTAAGACCAGTATTGTTCTGGAAATTACTTATTGCTTCTTTGGTAATGTTAGTTGGTGGTTATTTAGGTGAAGCAGGTCTTATGGCGAGCATGCCGGCATTCATTATTGGAATGATTGGTTGGGCAGCTGTAATTTACTTGATCTTTGCTGGTGATGCAGCAAAAGCTAGTGTTGCTAGTGGTAATGTTGCTTCACAAACTGCATTTAACGCCATGAGAATGATCGTATTAGTT LITVPLQIVEFYLILAAVTVVRPVLFWKLLIASLVMLVGGYLGEAGLMASMPAFIIGMIGWAAVIYLIFAGDAAKASVASGNVASQTAFNAMRMIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCTCTACAAATTGTAGAATTCTATCTTATCCTTGCAGCG---------GTA---ACTGTAGTAAGACCA---GTATTG------------------------------------TTCTGGAAA---TTACTTATTGCTTCTTTGGTAATGTTAGTTGGTGGTTATTTAGGTGAA---------GCA------------------GGT------CTT---------------------------------ATG------------------------------------------------------------------GCGAGC------------------ATGCCGGCA---TTCATTATTGGAATGATTGGTTGGGCAGCTGTAATTTACTTGATC---------------TTT------GCT---GGTGATGCAGCAAAAGCTAGTGTTGCT------AGT---GGTAATGTTGCTTCA---CAA---ACT---GCA---TTT---AAC---GCCATG---AGAATGATCGTATTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVRP-VL------------FWK-LLIASLVMLVGGYLGE---A------G--L-----------M----------------------AS------MPA-FIIGMIGWAAVIYLI-----F--A-GDAAKASVA--S-GNVAS-Q-T-A-F-N-AM-RMIVLV-------------------------------------------------------------------------------------------------------------------------------- [II]_KJ929678 [II] PRGD_OTU191_5bc2785668265ee409a10da1c3d95a12 gb|KJ929678| PRGD_OTU191_5bc2785668265ee409a10da1c3d95a12, putative proteorhodopsin gene, partial cds. PRGD_OTU191_5bc2785668265ee409a10da1c3d95a12, putative proteorhodopsin gene, partial cds. KJ929678 [[proteorhodopsin super-cluster II]] proteorhodopsin super-cluster II proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683) TTAATCACTGTACCTCTACAAATTGTAGAATTCTACCTTATCCTTGCAGCGGTAACTGTAGTAAGACCAGTATTGTTCTGGAAATTACTTATTGCTTCTTTGGTAATGTTAGTTGGTGGTTATTTAGGTGAAGCAGGTCTTATGGCGAGCATGCCAGCATTCATTATTGGAATGATTGGTTGGGCAGCTGTAATTTACTTGATCTTTGCTGGTGATGCAGCAAAAGCTAGTGTTGCTAGTGGTAATGTTGCTTCACAAACTGCATTTAACGCCATGAGAATGATCGTATTAGTT LITVPLQIVEFYLILAAVTVVRPVLFWKLLIASLVMLVGGYLGEAGLMASMPAFIIGMIGWAAVIYLIFAGDAAKASVASGNVASQTAFNAMRMIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCTCTACAAATTGTAGAATTCTACCTTATCCTTGCAGCG---------GTA---ACTGTAGTAAGACCA---GTATTG------------------------------------TTCTGGAAA---TTACTTATTGCTTCTTTGGTAATGTTAGTTGGTGGTTATTTAGGTGAA---------GCA------------------GGT------CTT---------------------------------ATG------------------------------------------------------------------GCGAGC------------------ATGCCAGCA---TTCATTATTGGAATGATTGGTTGGGCAGCTGTAATTTACTTGATC---------------TTT------GCT---GGTGATGCAGCAAAAGCTAGTGTTGCT------AGT---GGTAATGTTGCTTCA---CAA---ACT---GCA---TTT---AAC---GCCATG---AGAATGATCGTATTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVRP-VL------------FWK-LLIASLVMLVGGYLGE---A------G--L-----------M----------------------AS------MPA-FIIGMIGWAAVIYLI-----F--A-GDAAKASVA--S-GNVAS-Q-T-A-F-N-AM-RMIVLV-------------------------------------------------------------------------------------------------------------------------------- [II]_KJ929679 [II] PRGD_OTU191_bb22547879b0c655c9219e0e722edd00 gb|KJ929679| PRGD_OTU191_bb22547879b0c655c9219e0e722edd00, putative proteorhodopsin gene, partial cds. PRGD_OTU191_bb22547879b0c655c9219e0e722edd00, putative proteorhodopsin gene, partial cds. KJ929679 [[proteorhodopsin super-cluster II]] proteorhodopsin super-cluster II proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-35.05, 23.73) TTAATCACTGTGCCTCTCCAGATTGTAGAGTTCTACCTCATACTCGCAGCGGTAACTGTAGTAAGACCAGTATTATTCTGGAAACTACTTATTGCATCTATAGTAATGTTGGTTGGTGGATATTTAGGTGAAGCAGGTCTTATGGCTAGCATGCCAGCATTCGTTATTGGAATGATTGGTTGGGCAGCTGTAATTTACTTGATCTTTGCTGGTGATGCGGCTAAAGCTAGTACTGCTAGTGGTAACGTTGCCTCGCAAACTGCATTTAATGCTATGAGAATGATCGTATTAGTT LITVPLQIVEFYLILAAVTVVRPVLFWKLLIASIVMLVGGYLGEAGLMASMPAFVIGMIGWAAVIYLIFAGDAAKASTASGNVASQTAFNAMRMIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCTCTCCAGATTGTAGAGTTCTACCTCATACTCGCAGCG---------GTA---ACTGTAGTAAGACCA---GTATTA------------------------------------TTCTGGAAA---CTACTTATTGCATCTATAGTAATGTTGGTTGGTGGATATTTAGGTGAA---------GCA------------------GGT------CTT---------------------------------ATG------------------------------------------------------------------GCTAGC------------------ATGCCAGCA---TTCGTTATTGGAATGATTGGTTGGGCAGCTGTAATTTACTTGATC---------------TTT------GCT---GGTGATGCGGCTAAAGCTAGTACTGCT------AGT---GGTAACGTTGCCTCG---CAA---ACT---GCA---TTT---AAT---GCTATG---AGAATGATCGTATTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVRP-VL------------FWK-LLIASIVMLVGGYLGE---A------G--L-----------M----------------------AS------MPA-FVIGMIGWAAVIYLI-----F--A-GDAAKASTA--S-GNVAS-Q-T-A-F-N-AM-RMIVLV-------------------------------------------------------------------------------------------------------------------------------- [II]_KJ929597 [II] PRGD_OTU164_062b9ebb2482b70642d8bbe4f31482ec gb|KJ929597| PRGD_OTU164_062b9ebb2482b70642d8bbe4f31482ec, putative proteorhodopsin gene, partial cds. PRGD_OTU164_062b9ebb2482b70642d8bbe4f31482ec, putative proteorhodopsin gene, partial cds. KJ929597 [[proteorhodopsin super-cluster II]] proteorhodopsin super-cluster II proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTTATTACTGTTCCACTACAAATTGTTGAATTTTACCTAATATTAGCTGCTGTGACTTTGGTAAGCTCTAAACTATTTTGGAAATTACTCATAGCTAGTTTAGTAATGTTAATTGGTGGTTACTGTGGTGAAACATGTGCCGGTTGGCAAACCCAAGGTTTCGTCATTGGTATGATAGGTTGGATTGGTGTTTTATACCTAATTTTTGCTGGTGATGCAGCAAAGGCAAATGAAGCTAGTGGTAACAAAGCTAGCCAGTTTGCATTTAAAGTTATGAGATTAATTGTTCTTGTT FITVPLQIVEFYLILAAVTLVSSKLFWKLLIASLVMLIGGYCGETCAGWQTQGFVIGMIGWIGVLYLIFAGDAAKANEASGNKASQFAFKVMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATTACTGTTCCACTACAAATTGTTGAATTTTACCTAATATTAGCTGCT---------GTG---ACTTTGGTAAGCTCT---AAACTA------------------------------------TTTTGGAAA---TTACTCATAGCTAGTTTAGTAATGTTAATTGGTGGTTACTGTGGTGAA---------ACA------------------TGT------GCC---------------------------------GGT------------------------------------------------------------------TGGCAA------------------ACCCAAGGT---TTCGTCATTGGTATGATAGGTTGGATTGGTGTTTTATACCTAATT---------------TTT------GCT---GGTGATGCAGCAAAGGCAAATGAAGCT------AGT---GGTAACAAAGCTAGC---CAG---TTT---GCA---TTT---AAA---GTTATG---AGATTAATTGTTCTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIVEFYLILAA---V-TLVSS-KL------------FWK-LLIASLVMLIGGYCGE---T------C--A-----------G----------------------WQ------TQG-FVIGMIGWIGVLYLI-----F--A-GDAAKANEA--S-GNKAS-Q-F-A-F-K-VM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [II]_KJ929596 [II] PRGD_OTU164_otuREP_9f3fd67facdcc79fad8fcd9b1b0c8ac3 gb|KJ929596| PRGD_OTU164_otuREP_9f3fd67facdcc79fad8fcd9b1b0c8ac3, putative proteorhodopsin gene, partial cds. PRGD_OTU164_otuREP_9f3fd67facdcc79fad8fcd9b1b0c8ac3, putative proteorhodopsin gene, partial cds. KJ929596 [[proteorhodopsin super-cluster II]] proteorhodopsin super-cluster II proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTCATCACTGTACCTCTACAAATCGTAGAATTCTACTTAATACTTGCTGCTGTGACAATGGTAAGCTCTAAAGTATTTTGGAAGCTACTTATTGCAAGTTTAGTAATGCTAATTGGTGGTTACTGTGGTGAAACATGTGCTGGCTGGCAAACACAAGGTTTCGTAATTGGAATGATAGGTTGGATTGGCGTGCTTTATCTAATTTTCGTTGGTGATGCTGCAAAAGCAAATGATGCAAGCGGAAATAAAGCTGGTCAATTTGCGTTTAAAGTAATGAGATTAATTGTTCTAGTT FITVPLQIVEFYLILAAVTMVSSKVFWKLLIASLVMLIGGYCGETCAGWQTQGFVIGMIGWIGVLYLIFVGDAAKANDASGNKAGQFAFKVMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCATCACTGTACCTCTACAAATCGTAGAATTCTACTTAATACTTGCTGCT---------GTG---ACAATGGTAAGCTCT---AAAGTA------------------------------------TTTTGGAAG---CTACTTATTGCAAGTTTAGTAATGCTAATTGGTGGTTACTGTGGTGAA---------ACA------------------TGT------GCT---------------------------------GGC------------------------------------------------------------------TGGCAA------------------ACACAAGGT---TTCGTAATTGGAATGATAGGTTGGATTGGCGTGCTTTATCTAATT---------------TTC------GTT---GGTGATGCTGCAAAAGCAAATGATGCA------AGC---GGAAATAAAGCTGGT---CAA---TTT---GCG---TTT---AAA---GTAATG---AGATTAATTGTTCTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIVEFYLILAA---V-TMVSS-KV------------FWK-LLIASLVMLIGGYCGE---T------C--A-----------G----------------------WQ------TQG-FVIGMIGWIGVLYLI-----F--V-GDAAKANDA--S-GNKAG-Q-F-A-F-K-VM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [II]_KJ929598 [II] PRGD_OTU164_f685036e6c59a39345800ee13e3a3ad4 gb|KJ929598| PRGD_OTU164_f685036e6c59a39345800ee13e3a3ad4, putative proteorhodopsin gene, partial cds. PRGD_OTU164_f685036e6c59a39345800ee13e3a3ad4, putative proteorhodopsin gene, partial cds. KJ929598 [[proteorhodopsin super-cluster II]] proteorhodopsin super-cluster II proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-14.48, 113.45) TTCATTACTGTTCCATTGCAGATAGTTGAGTTTTATTTAATTCTTGCTGCAGTTACAGTTGTGAGCTCTAAAGTATTTTGGAAACTTTTAGTTGCTAGTTTAGTAATGCTTGTTGGTGGATACATGGGAGAAACATGTGCCGGATGGGAAACAAACGGATTCATAATTGGAATGTTAGGTTGGGCAGGAGTTGTGTACTTAATATTCGTTGGTGATGCTGCCAAAGCTAATGATGCAAGCGGAAATGAAGCAGGACAATTTGCTTTCAAAACAATGAGATTAATTGTTCTAGTT FITVPLQIVEFYLILAAVTVVSSKVFWKLLVASLVMLVGGYMGETCAGWETNGFIIGMLGWAGVVYLIFVGDAAKANDASGNEAGQFAFKTMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCATTACTGTTCCATTGCAGATAGTTGAGTTTTATTTAATTCTTGCTGCA---------GTT---ACAGTTGTGAGCTCT---AAAGTA------------------------------------TTTTGGAAA---CTTTTAGTTGCTAGTTTAGTAATGCTTGTTGGTGGATACATGGGAGAA---------ACA------------------TGT------GCC---------------------------------GGA------------------------------------------------------------------TGGGAA------------------ACAAACGGA---TTCATAATTGGAATGTTAGGTTGGGCAGGAGTTGTGTACTTAATA---------------TTC------GTT---GGTGATGCTGCCAAAGCTAATGATGCA------AGC---GGAAATGAAGCAGGA---CAA---TTT---GCT---TTC---AAA---ACAATG---AGATTAATTGTTCTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIVEFYLILAA---V-TVVSS-KV------------FWK-LLVASLVMLVGGYMGE---T------C--A-----------G----------------------WE------TNG-FIIGMLGWAGVVYLI-----F--V-GDAAKANDA--S-GNEAG-Q-F-A-F-K-TM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [II]_KJ929759 [II] PRGD_OTU231_6e00f35a8487a789f2cab2c4ad16b7eb gb|KJ929759| PRGD_OTU231_6e00f35a8487a789f2cab2c4ad16b7eb, putative proteorhodopsin gene, partial cds. PRGD_OTU231_6e00f35a8487a789f2cab2c4ad16b7eb, putative proteorhodopsin gene, partial cds. KJ929759 [[proteorhodopsin super-cluster II]] proteorhodopsin super-cluster II proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTAATTACAGTACCTTTACAAATCGTAGAGTTTTATTTAATTTTAGCAGCAGTAACAGCGGTCAGTAGAAGCTTATTCTGGCAACTTCTTGGTGCTTCATTGGTAATGTTAGTTTTTGGATTTGTGGGAGAGGCAGGCCTTATGTCTAGAATGCCAGCATTCGCCATTGGTATGTTAGGCTGGATTGCAGTACTGTATTTGATATTCTTTGGAGCAGCTGCAAATGTTAGTGATAGTAGTGGAAATAAAGCAGGACAAAGTGCATTTAAAGCTTTAAGATTTATTGTGCTTGTT LITVPLQIVEFYLILAAVTAVSRSLFWQLLGASLVMLVFGFVGEAGLMSRMPAFAIGMLGWIAVLYLIFFGAAANVSDSSGNKAGQSAFKALRFIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTACCTTTACAAATCGTAGAGTTTTATTTAATTTTAGCAGCA---------GTA---ACAGCGGTCAGTAGA---AGCTTA------------------------------------TTCTGGCAA---CTTCTTGGTGCTTCATTGGTAATGTTAGTTTTTGGATTTGTGGGAGAG---------GCA------------------GGC------CTT---------------------------------ATG------------------------------------------------------------------TCTAGA------------------ATGCCAGCA---TTCGCCATTGGTATGTTAGGCTGGATTGCAGTACTGTATTTGATA---------------TTC------TTT---GGAGCAGCTGCAAATGTTAGTGATAGT------AGT---GGAAATAAAGCAGGA---CAA---AGT---GCA---TTT---AAA---GCTTTA---AGATTTATTGTGCTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVSR-SL------------FWQ-LLGASLVMLVFGFVGE---A------G--L-----------M----------------------SR------MPA-FAIGMLGWIAVLYLI-----F--F-GAAANVSDS--S-GNKAG-Q-S-A-F-K-AL-RFIVLV-------------------------------------------------------------------------------------------------------------------------------- [II]_KJ929758 [II] PRGD_OTU231_otuREP_f465c25ba7732abc7aee6bd4e9571f12 gb|KJ929758| PRGD_OTU231_otuREP_f465c25ba7732abc7aee6bd4e9571f12, putative proteorhodopsin gene, partial cds. PRGD_OTU231_otuREP_f465c25ba7732abc7aee6bd4e9571f12, putative proteorhodopsin gene, partial cds. KJ929758 [[proteorhodopsin super-cluster II]] proteorhodopsin super-cluster II proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTACCTTTACAAATCGTAGAGTTTTATTTAATTTTAGCAGCAGTAACAGCGGTCAGTAGAAGCTTATTCTGGCAACTTCTTGGTGCTTCATTGGTAATGTTAGTTTTTGGATTTGTGGGAGAGGCAGGCCTTATGTCTAGAATGCCAGCATTCGCAATTGGCATGTTAGGCTGGATTGCAGTACTTTATTTGATATTTTTTGGAGCAGCTGCAAATGTTAGTGATAGTAGTGGAAATAAAGCAGGACAAAGCGCATTTAAAGCTTTAAGATTTATTGTGCTCGTT LITVPLQIVEFYLILAAVTAVSRSLFWQLLGASLVMLVFGFVGEAGLMSRMPAFAIGMLGWIAVLYLIFFGAAANVSDSSGNKAGQSAFKALRFIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTACCTTTACAAATCGTAGAGTTTTATTTAATTTTAGCAGCA---------GTA---ACAGCGGTCAGTAGA---AGCTTA------------------------------------TTCTGGCAA---CTTCTTGGTGCTTCATTGGTAATGTTAGTTTTTGGATTTGTGGGAGAG---------GCA------------------GGC------CTT---------------------------------ATG------------------------------------------------------------------TCTAGA------------------ATGCCAGCA---TTCGCAATTGGCATGTTAGGCTGGATTGCAGTACTTTATTTGATA---------------TTT------TTT---GGAGCAGCTGCAAATGTTAGTGATAGT------AGT---GGAAATAAAGCAGGA---CAA---AGC---GCA---TTT---AAA---GCTTTA---AGATTTATTGTGCTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVSR-SL------------FWQ-LLGASLVMLVFGFVGE---A------G--L-----------M----------------------SR------MPA-FAIGMLGWIAVLYLI-----F--F-GAAANVSDS--S-GNKAG-Q-S-A-F-K-AL-RFIVLV-------------------------------------------------------------------------------------------------------------------------------- [II-env7]_KJ929617 [II-env7] PRGD_OTU171_otuREP_26792f4fcd13a04a450ae7f8cd545a69 gb|KJ929617| PRGD_OTU171_otuREP_26792f4fcd13a04a450ae7f8cd545a69, putative proteorhodopsin gene, partial cds. PRGD_OTU171_otuREP_26792f4fcd13a04a450ae7f8cd545a69, putative proteorhodopsin gene, partial cds. KJ929617 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTCATTACTGTACCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTCGCAGTAAGTCTTGGAGTATTTTGGAAATTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAAGCTGGAATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTA LITVPMQIVEFYLILAAVVAVSLGVFWKLLIASLVMLIGGFLGEAGIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATTACTGTACCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTCGCAGTAAGTCTT---GGAGTA------------------------------------TTTTGGAAA---TTATTAATTGCATCACTAGTAATGCTCATTGGAGGATTTCTTGGTGAA---------GCT------------------GGA------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTATGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLIASLVMLIGGFLGE---A------G--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [II-env7]_KJ929619 [II-env7] PRGD_OTU171_4b9f226ce974efb63dbac08b14f564c2 gb|KJ929619| PRGD_OTU171_4b9f226ce974efb63dbac08b14f564c2, putative proteorhodopsin gene, partial cds. PRGD_OTU171_4b9f226ce974efb63dbac08b14f564c2, putative proteorhodopsin gene, partial cds. KJ929619 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCATTACTGTACCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCAGTTGTCGCAGTAAGTCTTGGAGTATTTTGGAAATTATTAGTTGCGTCACTAGTTATGCTCATTGGAGGATTTCTTGGTGAAGCTGATATAATTGATCCAACAGTAGGTTTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTACGTCTTTGCTGGTGAAGCTGCTCAAATTAAAGATGCAGCTGGTAATGAAAACCTATCATTTGCATTTAATGGAATCAAATGGATTGTAACTGTA LITVPMQIVEFYLILAAVVAVSLGVFWKLLVASLVMLIGGFLGEADIIDPTVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLSFAFNGIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATTACTGTACCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------GTT---GTCGCAGTAAGTCTT---GGAGTA------------------------------------TTTTGGAAA---TTATTAGTTGCGTCACTAGTTATGCTCATTGGAGGATTTCTTGGTGAA---------GCT------------------GAT------ATA---------------------------------ATT------------------------------------------------------------------GATCCA------------------ACAGTAGGT---TTTGTAGTAGGGATGTTAGGTTGGATATTTATTATCTACTACGTC---------------TTT------GCT---GGTGAAGCTGCTCAAATTAAAGATGCA------GCT---GGTAATGAAAACCTA---TCA---TTT---GCA---TTT---AAT---GGAATC---AAATGGATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LLVASLVMLIGGFLGE---A------D--I-----------I----------------------DP------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-S-F-A-F-N-GI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [II-env7]_KJ929618 [II-env7] PRGD_OTU171_44c9eb6c9ef544b42f0f403e7791a0a8 gb|KJ929618| PRGD_OTU171_44c9eb6c9ef544b42f0f403e7791a0a8, putative proteorhodopsin gene, partial cds. PRGD_OTU171_44c9eb6c9ef544b42f0f403e7791a0a8, putative proteorhodopsin gene, partial cds. KJ929618 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.935 18.508 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (33.762, 29.175; 33.935, 18.508) TTGATCACTGTTCCTATGCAGATTGTCGAGTTTTATCTAATTCTTGCAGCAGTAGTTGCAGTAAGTCTTGGAGTATTTTGGAAATTATTTATTGCATCACTTGTAATGCTCATAGGTGGGTATTTGGGTGAAGCTGGATTAATAGACGCAACAGTAGGTTTTGTTGTGGGGATGTTAGGCTGGATATTTATTATTTACTACGTCTTTGCAGGTGAAGCGGCTCAAATTAAAGATGCTGCAGGAAACGAAAACCTTACCTTTGCATTTAATGGAATCAAGTGGATTGTAACTGTT LITVPMQIVEFYLILAAVVAVSLGVFWKLFIASLVMLIGGYLGEAGLIDATVGFVVGMLGWIFIIYYVFAGEAAQIKDAAGNENLTFAFNGIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTTCCTATGCAGATTGTCGAGTTTTATCTAATTCTTGCAGCA---------GTA---GTTGCAGTAAGTCTT---GGAGTA------------------------------------TTTTGGAAA---TTATTTATTGCATCACTTGTAATGCTCATAGGTGGGTATTTGGGTGAA---------GCT------------------GGA------TTA---------------------------------ATA------------------------------------------------------------------GACGCA------------------ACAGTAGGT---TTTGTTGTGGGGATGTTAGGCTGGATATTTATTATTTACTACGTC---------------TTT------GCA---GGTGAAGCGGCTCAAATTAAAGATGCT------GCA---GGAAACGAAAACCTT---ACC---TTT---GCA---TTT---AAT---GGAATC---AAGTGGATTGTAACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPMQIVEFYLILAA---V-VAVSL-GV------------FWK-LFIASLVMLIGGYLGE---A------G--L-----------I----------------------DA------TVG-FVVGMLGWIFIIYYV-----F--A-GEAAQIKDA--A-GNENL-T-F-A-F-N-GI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [II-env7]_KJ929357 [II-env7] PRGD_OTU110_0bb22d50566e98a6425091a5a0dc4428 gb|KJ929357| PRGD_OTU110_0bb22d50566e98a6425091a5a0dc4428, putative proteorhodopsin gene, partial cds. PRGD_OTU110_0bb22d50566e98a6425091a5a0dc4428, putative proteorhodopsin gene, partial cds. KJ929357 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) CTAGTAACTGTTCCTATGCAAATCGTTGAATTTTATCTAATTCTTGCAGCATGTACTGCTGTTAGTCTTGGAGTATTTTGGAAGCTTTTAGGCGGTTCATTAGTTATGCTTTTAGGAGGATATCTTGGTGAAACAGGTGGCCTTGGTGTATCACCAATGGTCGGATTTATCGTCGGAATGGCTGGTTGGGTATTCATCATTTACTACATATTTGTAGGTGAAGCTGCTCAAATCAAAGATTCTGCAGGTAACGAAAACCTAGTAATGGCTTTCGACGGAATTAAATGGATTGTAACAATA LVTVPMQIVEFYLILAACTAVSLGVFWKLLGGSLVMLLGGYLGETGGLGVSPMVGFIVGMAGWVFIIYYIFVGEAAQIKDSAGNENLVMAFDGIKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGTAACTGTTCCTATGCAAATCGTTGAATTTTATCTAATTCTTGCAGCA---------TGT---ACTGCTGTTAGTCTT---GGAGTA------------------------------------TTTTGGAAG---CTTTTAGGCGGTTCATTAGTTATGCTTTTAGGAGGATATCTTGGTGAA---------ACA------------------GGTGGCCTTGGT---------------------------------GTA------------------------------------------------------------------TCACCA------------------ATGGTCGGA---TTTATCGTCGGAATGGCTGGTTGGGTATTCATCATTTACTACATA---------------TTT------GTA---GGTGAAGCTGCTCAAATCAAAGATTCT------GCA---GGTAACGAAAACCTA---GTA---ATG---GCT---TTC---GAC---GGAATT---AAATGGATTGTAACAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVTVPMQIVEFYLILAA---C-TAVSL-GV------------FWK-LLGGSLVMLLGGYLGE---T------GGLG-----------V----------------------SP------MVG-FIVGMAGWVFIIYYI-----F--V-GEAAQIKDS--A-GNENL-V-M-A-F-D-GI-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [II-env7]_KJ929358 [II-env7] PRGD_OTU110_7cf8a42019e0e3da878084c2b1c92e23 gb|KJ929358| PRGD_OTU110_7cf8a42019e0e3da878084c2b1c92e23, putative proteorhodopsin gene, partial cds. PRGD_OTU110_7cf8a42019e0e3da878084c2b1c92e23, putative proteorhodopsin gene, partial cds. KJ929358 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937), Mediterranean Sea (38.6308, 7.9097; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) TTGATTACTGTACCTATGCAAATCGTCGAATTTTATCTAATTCTTGCAGCATGTACTGTTGTTAGTCTTGGAGTATTTTGGAAGTTATTAGCTGGATCACTAGTTATGCTCTTAGGAGGATATGCAGGTGAAACAGGTATGTTATCACCAATGGTCGGATTCGTTATCGGAATGGCTGGTTGGATCTTCATCATCTACTACATTTTTGTGGGTGAAGCAGCTCAAATCAAAGATTCTGCAGGTAACGAAAACCTAGTAATGGCTTTCGACGGAATTAAATGGATTGTAACTATT LITVPMQIVEFYLILAACTVVSLGVFWKLLAGSLVMLLGGYAGETGMLSPMVGFVIGMAGWIFIIYYIFVGEAAQIKDSAGNENLVMAFDGIKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTACCTATGCAAATCGTCGAATTTTATCTAATTCTTGCAGCA---------TGT---ACTGTTGTTAGTCTT---GGAGTA------------------------------------TTTTGGAAG---TTATTAGCTGGATCACTAGTTATGCTCTTAGGAGGATATGCAGGTGAA---------ACA------------------GGTATG---------------------------------------TTA------------------------------------------------------------------TCACCA------------------ATGGTCGGA---TTCGTTATCGGAATGGCTGGTTGGATCTTCATCATCTACTACATT---------------TTT------GTG---GGTGAAGCAGCTCAAATCAAAGATTCT------GCA---GGTAACGAAAACCTA---GTA---ATG---GCT---TTC---GAC---GGAATT---AAATGGATTGTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPMQIVEFYLILAA---C-TVVSL-GV------------FWK-LLAGSLVMLLGGYAGE---T------GM-------------L----------------------SP------MVG-FVIGMAGWIFIIYYI-----F--V-GEAAQIKDS--A-GNENL-V-M-A-F-D-GI-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [II-env7]_KJ929361 [II-env7] PRGD_OTU110_f70ad9501fa083df0bcf9e0cd79a166e gb|KJ929361| PRGD_OTU110_f70ad9501fa083df0bcf9e0cd79a166e, putative proteorhodopsin gene, partial cds. PRGD_OTU110_f70ad9501fa083df0bcf9e0cd79a166e, putative proteorhodopsin gene, partial cds. KJ929361 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTGATTACTGTACCTATGCAAATCGTTGAGTTTTATCTAATTCTTGCAGCATGTACTGCTGTTAGTCTTGGAGTATTTTGGAAGTTATTAGCTGGTTCACTAGTTATGCTCTTAGGAGGATATGCAGGTGAAACAGGTATGTTTGGTGTTACACCATTGGTTGGTTTCATTGTTGGAATGGCTGGTTGGATCTTCATCATCTACTACATTTTTGTAGGTGAAGCGGCTCAAATCAAAGATTCTGCAGGTAACGAAAACCTAGTAATGGCTTTCGACGGAATTAAATGGATTGTAACTATA LITVPMQIVEFYLILAACTAVSLGVFWKLLAGSLVMLLGGYAGETGMFGVTPLVGFIVGMAGWIFIIYYIFVGEAAQIKDSAGNENLVMAFDGIKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTACCTATGCAAATCGTTGAGTTTTATCTAATTCTTGCAGCA---------TGT---ACTGCTGTTAGTCTT---GGAGTA------------------------------------TTTTGGAAG---TTATTAGCTGGTTCACTAGTTATGCTCTTAGGAGGATATGCAGGTGAA---------ACA------------------GGTATGTTTGGT---------------------------------GTT------------------------------------------------------------------ACACCA------------------TTGGTTGGT---TTCATTGTTGGAATGGCTGGTTGGATCTTCATCATCTACTACATT---------------TTT------GTA---GGTGAAGCGGCTCAAATCAAAGATTCT------GCA---GGTAACGAAAACCTA---GTA---ATG---GCT---TTC---GAC---GGAATT---AAATGGATTGTAACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPMQIVEFYLILAA---C-TAVSL-GV------------FWK-LLAGSLVMLLGGYAGE---T------GMFG-----------V----------------------TP------LVG-FIVGMAGWIFIIYYI-----F--V-GEAAQIKDS--A-GNENL-V-M-A-F-D-GI-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [II-env7]_KJ929360 [II-env7] PRGD_OTU110_dfa60c076982a8bcdaa981e029f04e3b gb|KJ929360| PRGD_OTU110_dfa60c076982a8bcdaa981e029f04e3b, putative proteorhodopsin gene, partial cds. PRGD_OTU110_dfa60c076982a8bcdaa981e029f04e3b, putative proteorhodopsin gene, partial cds. KJ929360 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (33.935, 18.508), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) TTGATTACTGTACCTATGCAAATCGTTGAATTTTATCTAATTCTTGCAGCATGTACTGCTGTTAGTCTTGGAGTATTTTGGAAGTTATTAGCTGGTTCACTAGTTATGCTCTTAGGAGGATATTTTGGTGAGACTGGTGTTTTATCACCAATGGTCGGATTCGTTGTCGGAATGGCTGGTTGGATCTTCATCATCTACTACATTTTTGTAGGTGAAGCAGCTCAAATCAAAGACTCCGCAGGTAACGAAAACCTAGTATTAGCTTTCGACGGAATTAAATGGATTGTAACTATA LITVPMQIVEFYLILAACTAVSLGVFWKLLAGSLVMLLGGYFGETGVLSPMVGFVVGMAGWIFIIYYIFVGEAAQIKDSAGNENLVLAFDGIKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTACCTATGCAAATCGTTGAATTTTATCTAATTCTTGCAGCA---------TGT---ACTGCTGTTAGTCTT---GGAGTA------------------------------------TTTTGGAAG---TTATTAGCTGGTTCACTAGTTATGCTCTTAGGAGGATATTTTGGTGAG---------ACT------------------GGT------GTT---------------------------------TTA------------------------------------------------------------------TCACCA------------------ATGGTCGGA---TTCGTTGTCGGAATGGCTGGTTGGATCTTCATCATCTACTACATT---------------TTT------GTA---GGTGAAGCAGCTCAAATCAAAGACTCC------GCA---GGTAACGAAAACCTA---GTA---TTA---GCT---TTC---GAC---GGAATT---AAATGGATTGTAACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPMQIVEFYLILAA---C-TAVSL-GV------------FWK-LLAGSLVMLLGGYFGE---T------G--V-----------L----------------------SP------MVG-FVVGMAGWIFIIYYI-----F--V-GEAAQIKDS--A-GNENL-V-L-A-F-D-GI-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [II-env7]_KJ929356 [II-env7] PRGD_OTU110_otuREP_2b702f53fbcf7db1dae58775e459950a gb|KJ929356| PRGD_OTU110_otuREP_2b702f53fbcf7db1dae58775e459950a, putative proteorhodopsin gene, partial cds. PRGD_OTU110_otuREP_2b702f53fbcf7db1dae58775e459950a, putative proteorhodopsin gene, partial cds. KJ929356 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-33.28, 45.35) TTGATTACTGTACCTATGCAAATCGTTGAATTTTATCTAATTCTTGCAGCATGTACTGCTGTCAGTCTTGGAGTATTTTGGAAGTTATTAGCTGGATCACTAGTTATGCTCTTAGGAGGATATGCAGGTGAAACAGGTATGTTATCACCATTGATGGGATTCATTATGGGAATGGCTGGTTGGCTATTTATCATCTACTACATTTTTGTGGGTGAAGCAGCTCAAATCAAAGATTCTGCAGGTAATGAAAACCTCGTAATGGCTTTCGACGGAATTAAATGGATTGTAACTATA LITVPMQIVEFYLILAACTAVSLGVFWKLLAGSLVMLLGGYAGETGMLSPLMGFIMGMAGWLFIIYYIFVGEAAQIKDSAGNENLVMAFDGIKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTACCTATGCAAATCGTTGAATTTTATCTAATTCTTGCAGCA---------TGT---ACTGCTGTCAGTCTT---GGAGTA------------------------------------TTTTGGAAG---TTATTAGCTGGATCACTAGTTATGCTCTTAGGAGGATATGCAGGTGAA---------ACA------------------GGTATG---------------------------------------TTA------------------------------------------------------------------TCACCA------------------TTGATGGGA---TTCATTATGGGAATGGCTGGTTGGCTATTTATCATCTACTACATT---------------TTT------GTG---GGTGAAGCAGCTCAAATCAAAGATTCT------GCA---GGTAATGAAAACCTC---GTA---ATG---GCT---TTC---GAC---GGAATT---AAATGGATTGTAACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPMQIVEFYLILAA---C-TAVSL-GV------------FWK-LLAGSLVMLLGGYAGE---T------GM-------------L----------------------SP------LMG-FIMGMAGWLFIIYYI-----F--V-GEAAQIKDS--A-GNENL-V-M-A-F-D-GI-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [II-env7]_KJ929359 [II-env7] PRGD_OTU110_b01aca790d211b1cc8e1d37e42fc6396 gb|KJ929359| PRGD_OTU110_b01aca790d211b1cc8e1d37e42fc6396, putative proteorhodopsin gene, partial cds. PRGD_OTU110_b01aca790d211b1cc8e1d37e42fc6396, putative proteorhodopsin gene, partial cds. KJ929359 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-35.05, 23.73) TTAATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCATGTACTGCTGTTAGTCTTGGAGTATTTTGGAAGTTATTAGTCGGATCACTGGTTATGCTCTTAGGAGGATATGCAGGTGAGACTGGTATGTTATCACCGATGGTTGGTTTCGTTATCGGAATGGCTGGTTGGGTATTTATCATCTATTACATTTTTGTGGGTGAAGCAGCTCAAATCAAAGATTCCGCAGGTAATGAAAACCTAGTAATGGCTTTCGACGGAATTAAATGGATTGTAACTATA LITVPMQIVEFYLILAACTAVSLGVFWKLLVGSLVMLLGGYAGETGMLSPMVGFVIGMAGWVFIIYYIFVGEAAQIKDSAGNENLVMAFDGIKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTTCCTATGCAAATTGTCGAATTTTATCTAATTCTTGCAGCA---------TGT---ACTGCTGTTAGTCTT---GGAGTA------------------------------------TTTTGGAAG---TTATTAGTCGGATCACTGGTTATGCTCTTAGGAGGATATGCAGGTGAG---------ACT------------------GGT------ATG---------------------------------TTA------------------------------------------------------------------TCACCG------------------ATGGTTGGT---TTCGTTATCGGAATGGCTGGTTGGGTATTTATCATCTATTACATT---------------TTT------GTG---GGTGAAGCAGCTCAAATCAAAGATTCC------GCA---GGTAATGAAAACCTA---GTA---ATG---GCT---TTC---GAC---GGAATT---AAATGGATTGTAACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPMQIVEFYLILAA---C-TAVSL-GV------------FWK-LLVGSLVMLLGGYAGE---T------G--M-----------L----------------------SP------MVG-FVIGMAGWVFIIYYI-----F--V-GEAAQIKDS--A-GNENL-V-M-A-F-D-GI-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [II-env7]_KJ929738 [II-env7] PRGD_OTU221_otuREP_3c7447f085450bdd11faccfaef76fc16 gb|KJ929738| PRGD_OTU221_otuREP_3c7447f085450bdd11faccfaef76fc16, putative proteorhodopsin gene, partial cds. PRGD_OTU221_otuREP_3c7447f085450bdd11faccfaef76fc16, putative proteorhodopsin gene, partial cds. KJ929738 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), Mediterranean Sea (33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) TTGATTACTGTTCCTATGCAAATTGTAGAATTTTATTTAATACTAACTGCAGTGGTTGCAGTAAGCCTTTCAGTTTTCTGGAACTTGCTTGTTGCATCACTAGTAATGTTAATTTTTGGTTATCTTGGTGAAGCAGGATTAATGGATGCTACTGTAGCATTCGTTCCAGCAATGGCTGGGTGGTTGTATATCATCTGGTATGTGTTCGCTGGTGAAGCCGCAAAAATTAAAGATGCAGCTGGTAACGAAGCATTAAGCTTTGCATTTAATGGAATTAAATGGATTGTAACAATT LITVPMQIVEFYLILTAVVAVSLSVFWNLLVASLVMLIFGYLGEAGLMDATVAFVPAMAGWLYIIWYVFAGEAAKIKDAAGNEALSFAFNGIKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTTCCTATGCAAATTGTAGAATTTTATTTAATACTAACTGCA---------GTG---GTTGCAGTAAGCCTT---TCAGTT------------------------------------TTCTGGAAC---TTGCTTGTTGCATCACTAGTAATGTTAATTTTTGGTTATCTTGGTGAA---------GCA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------GATGCT------------------ACTGTAGCA---TTCGTTCCAGCAATGGCTGGGTGGTTGTATATCATCTGGTATGTG---------------TTC------GCT---GGTGAAGCCGCAAAAATTAAAGATGCA------GCT---GGTAACGAAGCATTA---AGC---TTT---GCA---TTT---AAT---GGAATT---AAATGGATTGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPMQIVEFYLILTA---V-VAVSL-SV------------FWN-LLVASLVMLIFGYLGE---A------G--L-----------M----------------------DA------TVA-FVPAMAGWLYIIWYV-----F--A-GEAAKIKDA--A-GNEAL-S-F-A-F-N-GI-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [II-env7]_KJ929739 [II-env7] PRGD_OTU221_6f4f344c07bcece2a7bff44113b4b177 gb|KJ929739| PRGD_OTU221_6f4f344c07bcece2a7bff44113b4b177, putative proteorhodopsin gene, partial cds. PRGD_OTU221_6f4f344c07bcece2a7bff44113b4b177, putative proteorhodopsin gene, partial cds. KJ929739 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.935 18.508 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), Mediterranean Sea (33.762, 29.175; 33.935, 18.508) TTGATAACTGTTCCTATGCAAATTGTAGAATTTTATTTAATACTAACTGCAGTGGTTGCAGTAAGCCTTTCAGTTTTCTGGAACTTGCTTGTTGCATCACTAGTAATGTTAATTTTTGGTTATCTTGGTGAAGCAGGATTAATGGATGCTACTGTAGCATTCGTCCCAGCAATGGCTGGGTGGTTGTATATCATCTGGTATGTGTTCGCTGGTGAAGCCGCAAAAATTAAAGATGCAGCTGGTAACGAAGCATTAAGCTTTGCATTTAATGGAATTAAATGGATTGTAACAATT LITVPMQIVEFYLILTAVVAVSLSVFWNLLVASLVMLIFGYLGEAGLMDATVAFVPAMAGWLYIIWYVFAGEAAKIKDAAGNEALSFAFNGIKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACTGTTCCTATGCAAATTGTAGAATTTTATTTAATACTAACTGCA---------GTG---GTTGCAGTAAGCCTT---TCAGTT------------------------------------TTCTGGAAC---TTGCTTGTTGCATCACTAGTAATGTTAATTTTTGGTTATCTTGGTGAA---------GCA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------GATGCT------------------ACTGTAGCA---TTCGTCCCAGCAATGGCTGGGTGGTTGTATATCATCTGGTATGTG---------------TTC------GCT---GGTGAAGCCGCAAAAATTAAAGATGCA------GCT---GGTAACGAAGCATTA---AGC---TTT---GCA---TTT---AAT---GGAATT---AAATGGATTGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPMQIVEFYLILTA---V-VAVSL-SV------------FWN-LLVASLVMLIFGYLGE---A------G--L-----------M----------------------DA------TVA-FVPAMAGWLYIIWYV-----F--A-GEAAKIKDA--A-GNEAL-S-F-A-F-N-GI-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [II-env7]_KJ929922 [II-env7] PRGD_OTU373_otuREP_86cbbd51ac5ce5744a5a3f6a24cf126c gb|KJ929922| PRGD_OTU373_otuREP_86cbbd51ac5ce5744a5a3f6a24cf126c, putative proteorhodopsin gene, partial cds. PRGD_OTU373_otuREP_86cbbd51ac5ce5744a5a3f6a24cf126c, putative proteorhodopsin gene, partial cds. KJ929922 [[proteorhodopsin super-cluster II/env cluster 7]] proteorhodopsin super-cluster II env cluster 7 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTTATTACTGTTCCATTACAAATTGTTGAGTTTTACTTAATTCTAGCAGCAATAACTGCAGTTAGAAGTCAATTGTTCTGGAAGTTATTAGTTGCGTCATTAGTGATGCTTTTAGGTGGGTACCTAGGTGAAATAGGAACACTATCTTCAAGTGCTGGATTCATTATTGGTATGGCTGGATGGATTTATATCATCTACGAAATATTTGCTGGTGAAGCATCAAAAGCTTGCTCAGCATCTGGGAATGCTGCTGGTATTCAAGCGTTTAAAGTTCTTAGATTGATTGTAACAGTT FITVPLQIVEFYLILAAITAVRSQLFWKLLVASLVMLLGGYLGEIGTLSSSAGFIIGMAGWIYIIYEIFAGEASKACSASGNAAGIQAFKVLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATTACTGTTCCATTACAAATTGTTGAGTTTTACTTAATTCTAGCAGCA---------ATA---ACTGCAGTTAGAAGT---CAATTG------------------------------------TTCTGGAAG---TTATTAGTTGCGTCATTAGTGATGCTTTTAGGTGGGTACCTAGGTGAA---------ATA------------------GGA------ACA---------------------------------CTA------------------------------------------------------------------TCTTCA------------------AGTGCTGGA---TTCATTATTGGTATGGCTGGATGGATTTATATCATCTACGAAATA---------------TTT------GCT---GGTGAAGCATCAAAAGCTTGCTCAGCA------TCT---GGGAATGCTGCTGGT---ATT---CAA---GCG---TTT---AAA---GTTCTT---AGATTGATTGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIVEFYLILAA---I-TAVRS-QL------------FWK-LLVASLVMLLGGYLGE---I------G--T-----------L----------------------SS------SAG-FIIGMAGWIYIIYEI-----F--A-GEASKACSA--S-GNAAG-I-Q-A-F-K-VL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928473 [unk-Proteo1-b] PRGD_OTU037_fb1a3bb717a3db625b27306f15693cc8 gb|KJ928473| PRGD_OTU037_fb1a3bb717a3db625b27306f15693cc8, putative proteorhodopsin gene, partial cds. PRGD_OTU037_fb1a3bb717a3db625b27306f15693cc8, putative proteorhodopsin gene, partial cds. KJ928473 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683) CTCATCACAGTGCCGTTATTGATGATCGAATTTTTCATTATACTAAAAGCGGTTGGCGCGGCCGTCAGTACAGGTTCGTTCCTTCGGTTGTTGGTCGGCACCTTGGTTATGCTTATCTTCGGCTATTTAGGCGAAGCGGCTATTATGCCTTCAACAATCGCCTTCTGGATAGGCATGGTCGGTTGGGCTGTGATCATCTATGAAATCTTTGCGGGTGAAGCGTCAAAGGCGGCAGCGGCAAACGAAAGCGTAAAGGCAGCATTCGGTTACATGCGCTTAATCGTGCTGGTG LITVPLLMIEFFIILKAVGAAVSTGSFLRLLVGTLVMLIFGYLGEAAIMPSTIAFWIGMVGWAVIIYEIFAGEASKAAAANESVKAAFGYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTGCCGTTATTGATGATCGAATTTTTCATTATACTAAAAGCG---------GTTGGCGCGGCCGTCAGTACA---GGTTCG------------------------------------TTCCTTCGG---TTGTTGGTCGGCACCTTGGTTATGCTTATCTTCGGCTATTTAGGCGAA---------GCG------------------GCT------ATT---------------------------------ATG------------------------------------------------------------------CCTTCA------------------ACAATCGCC---TTCTGGATAGGCATGGTCGGTTGGGCTGTGATCATCTATGAAATC---------------TTT------GCG---GGTGAAGCGTCAAAGGCGGCA------------GCG---GCAAACGAAAGCGTA---AAG---GCA---GCA---TTC---GGT---TACATG---CGCTTAATCGTGCTGGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVST-GS------------FLR-LLVGTLVMLIFGYLGE---A------A--I-----------M----------------------PS------TIA-FWIGMVGWAVIIYEI-----F--A-GEASKAA----A-ANESV-K-A-A-F-G-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928462 [unk-Proteo1-b] PRGD_OTU037_650917714caa0bfbd35c0501f8afcb35 gb|KJ928462| PRGD_OTU037_650917714caa0bfbd35c0501f8afcb35, putative proteorhodopsin gene, partial cds. PRGD_OTU037_650917714caa0bfbd35c0501f8afcb35, putative proteorhodopsin gene, partial cds. KJ928462 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Bering strait marine 67.49 -168.12 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Arctic Ocean-Pacific side (70.9139, -128.9264; ; ; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (33.935, 18.508) CTCATCACAGTGCCGTTATTGATGATCGAATTTTTCATTATACTAAAAGCGGTTGGCGCGGCCGTCAGTACAGGTTCGTTCCTTCGGTTGTTGGTCGGCACCTTGGTTATGCTTATCTTCGGCTATTTAGGCGAAGCGGGCGTTATGCAGAATTCAACAATCGCCTTCTGGATAGGCATGGTCGGTTGGGCTGTGATCATCTATGAAATCTTTGCGGGTGAAGCGTCAAAGGCGGCGGCGGCAAACGAAAGCGTAAAGGCAGCATTTGGTTACATGCGCTTAATCGTGCTGGTG LITVPLLMIEFFIILKAVGAAVSTGSFLRLLVGTLVMLIFGYLGEAGVMQNSTIAFWIGMVGWAVIIYEIFAGEASKAAAANESVKAAFGYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTGCCGTTATTGATGATCGAATTTTTCATTATACTAAAAGCG---------GTTGGCGCGGCCGTCAGTACA---GGTTCG------------------------------------TTCCTTCGG---TTGTTGGTCGGCACCTTGGTTATGCTTATCTTCGGCTATTTAGGCGAA---------GCG------------------GGC------GTT---------------------------------ATG---------------------------------------------------------------CAGAATTCA------------------ACAATCGCC---TTCTGGATAGGCATGGTCGGTTGGGCTGTGATCATCTATGAAATC---------------TTT------GCG---GGTGAAGCGTCAAAGGCGGCG------------GCG---GCAAACGAAAGCGTA---AAG---GCA---GCA---TTT---GGT---TACATG---CGCTTAATCGTGCTGGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVST-GS------------FLR-LLVGTLVMLIFGYLGE---A------G--V-----------M---------------------QNS------TIA-FWIGMVGWAVIIYEI-----F--A-GEASKAA----A-ANESV-K-A-A-F-G-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928448 [unk-Proteo1-b] PRGD_OTU037_otuREP_9320bf2f8c56ef6ee541f0fb928f86f5 gb|KJ928448| PRGD_OTU037_otuREP_9320bf2f8c56ef6ee541f0fb928f86f5, putative proteorhodopsin gene, partial cds. PRGD_OTU037_otuREP_9320bf2f8c56ef6ee541f0fb928f86f5, putative proteorhodopsin gene, partial cds. KJ928448 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Bering strait marine 67.49 -168.12 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.935, 18.508), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTCATCACAGTGCCGTTATTGATGATCGAATTTTTCATTATACTAAAAGCGGTTGGCGCGGCCGTCAGTACAGGTTCGTTCCTTCGGTTGTTGGTCGGCACCTTGGTTATGCTTATCTTCGGCTATTTAGGCGAAGCGGGCGTTATGAATTCAACAATCGCCTTCTGGATAGGCATGGTCGGTTGGGCTGTGATCATCTATGAAATCTTTGCGGGTGAAGCGTCAAAGGCGGCAGCGGCAAACGAAAGCGTAAAGGCAGCATTTGGTTACATGCGCTTAATCGTGCTGGTG LITVPLLMIEFFIILKAVGAAVSTGSFLRLLVGTLVMLIFGYLGEAGVMNSTIAFWIGMVGWAVIIYEIFAGEASKAAAANESVKAAFGYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTGCCGTTATTGATGATCGAATTTTTCATTATACTAAAAGCG---------GTTGGCGCGGCCGTCAGTACA---GGTTCG------------------------------------TTCCTTCGG---TTGTTGGTCGGCACCTTGGTTATGCTTATCTTCGGCTATTTAGGCGAA---------GCG------------------GGC------GTT---------------------------------ATG------------------------------------------------------------------AATTCA------------------ACAATCGCC---TTCTGGATAGGCATGGTCGGTTGGGCTGTGATCATCTATGAAATC---------------TTT------GCG---GGTGAAGCGTCAAAGGCGGCA------------GCG---GCAAACGAAAGCGTA---AAG---GCA---GCA---TTT---GGT---TACATG---CGCTTAATCGTGCTGGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVST-GS------------FLR-LLVGTLVMLIFGYLGE---A------G--V-----------M----------------------NS------TIA-FWIGMVGWAVIIYEI-----F--A-GEASKAA----A-ANESV-K-A-A-F-G-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928450 [unk-Proteo1-b] PRGD_OTU037_10795dceb6d4a15a937a3d69b4f8a52b gb|KJ928450| PRGD_OTU037_10795dceb6d4a15a937a3d69b4f8a52b, putative proteorhodopsin gene, partial cds. PRGD_OTU037_10795dceb6d4a15a937a3d69b4f8a52b, putative proteorhodopsin gene, partial cds. KJ928450 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) CTGATTACGGTGCCGTTGTTGATGATCGAGTTTTTCATCATTCTTAAAGCAGTAGGTGCAGCTGTAGGCAATGGGTCATTCCTACGTTTGCTCGTCGGTACGCTTGTCATGCTGATATTCGGTTACTTCGGTGAGGCTGGCGTGATGAACTCTACCATCGCATTCTGGATTGGTATGGTAGGTTGGGCTGTTATCATCTACGAAATCTTCGCGGGTGAAGCGTCCAAAGCGGCAGCGGCGACGGAAAGCGTCAAGGCGGCATTTGGTTACATGCGCCTGATCGTCCTGGTT LITVPLLMIEFFIILKAVGAAVGNGSFLRLLVGTLVMLIFGYFGEAGVMNSTIAFWIGMVGWAVIIYEIFAGEASKAAAATESVKAAFGYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACGGTGCCGTTGTTGATGATCGAGTTTTTCATCATTCTTAAAGCA---------GTAGGTGCAGCTGTAGGCAAT---GGGTCA------------------------------------TTCCTACGT---TTGCTCGTCGGTACGCTTGTCATGCTGATATTCGGTTACTTCGGTGAG---------GCT------------------GGC------GTG---------------------------------ATG------------------------------------------------------------------AACTCT------------------ACCATCGCA---TTCTGGATTGGTATGGTAGGTTGGGCTGTTATCATCTACGAAATC---------------TTC------GCG---GGTGAAGCGTCCAAAGCGGCA------------GCG---GCGACGGAAAGCGTC---AAG---GCG---GCA---TTT---GGT---TACATG---CGCCTGATCGTCCTGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVGN-GS------------FLR-LLVGTLVMLIFGYFGE---A------G--V-----------M----------------------NS------TIA-FWIGMVGWAVIIYEI-----F--A-GEASKAA----A-ATESV-K-A-A-F-G-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928469 [unk-Proteo1-b] PRGD_OTU037_cf37cc35cbd00474a51b7c811e1c9833 gb|KJ928469| PRGD_OTU037_cf37cc35cbd00474a51b7c811e1c9833, putative proteorhodopsin gene, partial cds. PRGD_OTU037_cf37cc35cbd00474a51b7c811e1c9833, putative proteorhodopsin gene, partial cds. KJ928469 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATTACGGTGCCGTTGTTGATGATCGAGTTCTTCATCATTCTTAAGGCAGTAGGTGCAGCTGTAGGCAATGGGTCATTCCTACGTTTGCTCGTCGGTACGCTTGTCATGCTGATATTCGGTTACTTCGGTGAGGCTGGCGTGATGAACTCTACCATCGCATTCTGGATTGGTATGGTAGGTTGGGCTGTTATCATCTACGAAATCTTCGCGGGTGAAGCGTCCAAAGCGGCAGCGGCGACGGAAAGCGTCAAGGCGGCATTTGGTTACATGCGCCTGATCGTCCTAGTT LITVPLLMIEFFIILKAVGAAVGNGSFLRLLVGTLVMLIFGYFGEAGVMNSTIAFWIGMVGWAVIIYEIFAGEASKAAAATESVKAAFGYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACGGTGCCGTTGTTGATGATCGAGTTCTTCATCATTCTTAAGGCA---------GTAGGTGCAGCTGTAGGCAAT---GGGTCA------------------------------------TTCCTACGT---TTGCTCGTCGGTACGCTTGTCATGCTGATATTCGGTTACTTCGGTGAG---------GCT------------------GGC------GTG---------------------------------ATG------------------------------------------------------------------AACTCT------------------ACCATCGCA---TTCTGGATTGGTATGGTAGGTTGGGCTGTTATCATCTACGAAATC---------------TTC------GCG---GGTGAAGCGTCCAAAGCGGCA------------GCG---GCGACGGAAAGCGTC---AAG---GCG---GCA---TTT---GGT---TACATG---CGCCTGATCGTCCTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVGN-GS------------FLR-LLVGTLVMLIFGYFGE---A------G--V-----------M----------------------NS------TIA-FWIGMVGWAVIIYEI-----F--A-GEASKAA----A-ATESV-K-A-A-F-G-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928452 [unk-Proteo1-b] PRGD_OTU037_210f3f2be69d6364ff8ac65e69cc67d8 gb|KJ928452| PRGD_OTU037_210f3f2be69d6364ff8ac65e69cc67d8, putative proteorhodopsin gene, partial cds. PRGD_OTU037_210f3f2be69d6364ff8ac65e69cc67d8, putative proteorhodopsin gene, partial cds. KJ928452 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -33.28, 45.35) CTGATTACGGTACCGTTGTTGATGATCGAGTTTTTCATCATTCTTAAAGCAGTAGGTGCAGCTGTAGGCAATGGGTCATTCCTACGTTTGCTCGGCGGTACGCTTGTCATGCTTATATTCGGTTACCTCGGCGAGGCTGGCGTGATGAACTCTACCATTGCATTCTGGGTTGGTATGGTAGGTTGGGCTATTATCATCTACGAAATCTTCGCGGGTGAAGCGTCCAAAGCGGCAGCGGCGACGGAAAGCGTCAAGGCGGCATTTAATTACATGCGTCTGATCGTCCTGGTT LITVPLLMIEFFIILKAVGAAVGNGSFLRLLGGTLVMLIFGYLGEAGVMNSTIAFWVGMVGWAIIIYEIFAGEASKAAAATESVKAAFNYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACGGTACCGTTGTTGATGATCGAGTTTTTCATCATTCTTAAAGCA---------GTAGGTGCAGCTGTAGGCAAT---GGGTCA------------------------------------TTCCTACGT---TTGCTCGGCGGTACGCTTGTCATGCTTATATTCGGTTACCTCGGCGAG---------GCT------------------GGC------GTG---------------------------------ATG------------------------------------------------------------------AACTCT------------------ACCATTGCA---TTCTGGGTTGGTATGGTAGGTTGGGCTATTATCATCTACGAAATC---------------TTC------GCG---GGTGAAGCGTCCAAAGCGGCA------------GCG---GCGACGGAAAGCGTC---AAG---GCG---GCA---TTT---AAT---TACATG---CGTCTGATCGTCCTGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVGN-GS------------FLR-LLGGTLVMLIFGYLGE---A------G--V-----------M----------------------NS------TIA-FWVGMVGWAIIIYEI-----F--A-GEASKAA----A-ATESV-K-A-A-F-N-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928453 [unk-Proteo1-b] PRGD_OTU037_26972af769bb4b0c75ceadb5f0b9784e gb|KJ928453| PRGD_OTU037_26972af769bb4b0c75ceadb5f0b9784e, putative proteorhodopsin gene, partial cds. PRGD_OTU037_26972af769bb4b0c75ceadb5f0b9784e, putative proteorhodopsin gene, partial cds. KJ928453 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-35.05, 23.73) CTGATTACGGTGCCGTTGTTGATGATCGAGTTTTTCATCATTCTTAAAGCAGTAGGTGCAGCTGTAGGCAATGGGTCATTCCTACGTTTGCTCGTCGGTACGCTTGTCATGCTGATATTCGGTTACTTCGGTGAGGCTGGCGTGATGAACTCTACCATCGCATTCTGGATTGGTATGGTAGGTTGGGTTGTTATCATCTACGAAATCTTCGCGGGTGAAGCGTCCAAAGCGGCAGCGGCGACGGAAAGCGTTAAGGCGGCATTTGGTTACATGCGCCTGATCGTCCTGGTC LITVPLLMIEFFIILKAVGAAVGNGSFLRLLVGTLVMLIFGYFGEAGVMNSTIAFWIGMVGWVVIIYEIFAGEASKAAAATESVKAAFGYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACGGTGCCGTTGTTGATGATCGAGTTTTTCATCATTCTTAAAGCA---------GTAGGTGCAGCTGTAGGCAAT---GGGTCA------------------------------------TTCCTACGT---TTGCTCGTCGGTACGCTTGTCATGCTGATATTCGGTTACTTCGGTGAG---------GCT------------------GGC------GTG---------------------------------ATG------------------------------------------------------------------AACTCT------------------ACCATCGCA---TTCTGGATTGGTATGGTAGGTTGGGTTGTTATCATCTACGAAATC---------------TTC------GCG---GGTGAAGCGTCCAAAGCGGCA------------GCG---GCGACGGAAAGCGTT---AAG---GCG---GCA---TTT---GGT---TACATG---CGCCTGATCGTCCTGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVGN-GS------------FLR-LLVGTLVMLIFGYFGE---A------G--V-----------M----------------------NS------TIA-FWIGMVGWVVIIYEI-----F--A-GEASKAA----A-ATESV-K-A-A-F-G-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928461 [unk-Proteo1-b] PRGD_OTU037_6267f2b9c913bc2a38ac54ac9810d50b gb|KJ928461| PRGD_OTU037_6267f2b9c913bc2a38ac54ac9810d50b, putative proteorhodopsin gene, partial cds. PRGD_OTU037_6267f2b9c913bc2a38ac54ac9810d50b, putative proteorhodopsin gene, partial cds. KJ928461 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) TTGATTACGGTGCCGTTGTTGATGATCGAGTTTTTCATCATTCTAAAAGCAGTAGGCGCAGCAGTAGGCAATGGGTCATTCCTACGTTTGCTTGTCGGTACGCTAGTCATGCTGATATTCGGATACTTCGGTGAGGCCGGTGTTATGGACTCAACCATCGCATTCTGGATTGGTATGGTAGGTTGGGCTGTTATCATCTACGAAATCTTCGCGGGTGAAGCGTCCAAAGCGGCAGCAGCGACGGAAAGCGTCAAGGCGGCATTCGGCTACATGCGCCTGATCGTCCTGGTT LITVPLLMIEFFIILKAVGAAVGNGSFLRLLVGTLVMLIFGYFGEAGVMDSTIAFWIGMVGWAVIIYEIFAGEASKAAAATESVKAAFGYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACGGTGCCGTTGTTGATGATCGAGTTTTTCATCATTCTAAAAGCA---------GTAGGCGCAGCAGTAGGCAAT---GGGTCA------------------------------------TTCCTACGT---TTGCTTGTCGGTACGCTAGTCATGCTGATATTCGGATACTTCGGTGAG---------GCC------------------GGT------GTT---------------------------------ATG------------------------------------------------------------------GACTCA------------------ACCATCGCA---TTCTGGATTGGTATGGTAGGTTGGGCTGTTATCATCTACGAAATC---------------TTC------GCG---GGTGAAGCGTCCAAAGCGGCA------------GCA---GCGACGGAAAGCGTC---AAG---GCG---GCA---TTC---GGC---TACATG---CGCCTGATCGTCCTGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVGN-GS------------FLR-LLVGTLVMLIFGYFGE---A------G--V-----------M----------------------DS------TIA-FWIGMVGWAVIIYEI-----F--A-GEASKAA----A-ATESV-K-A-A-F-G-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928472 [unk-Proteo1-b] PRGD_OTU037_f8eb0cfdd1b380248308e95a0aa70ec0 gb|KJ928472| PRGD_OTU037_f8eb0cfdd1b380248308e95a0aa70ec0, putative proteorhodopsin gene, partial cds. PRGD_OTU037_f8eb0cfdd1b380248308e95a0aa70ec0, putative proteorhodopsin gene, partial cds. KJ928472 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) CTGATTACAGTGCCGTTGTTGATGATCGAGTTTTTCATCATTCTTAAAGCAGTAGGCGCAGCCGTAGGTAATGGGTCCTTCCTACGTTTGCTCGTCGGTACGCTTGTCATGCTGATATTCGGTTACTTCGGTGAAGCTGGCGTGATGGACTCTACCATCGCATTCGTGATTGGTATGGTAGGTTGGGCTATTATCATCTACGAAATCTTCGCGGGTGAAGCGTCCAAAGCGGCAGCGGCGACGGAAAGCGTCAAGGCGGCATTTGGTTACATGCGTCTGATCGTCCTGGTT LITVPLLMIEFFIILKAVGAAVGNGSFLRLLVGTLVMLIFGYFGEAGVMDSTIAFVIGMVGWAIIIYEIFAGEASKAAAATESVKAAFGYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACAGTGCCGTTGTTGATGATCGAGTTTTTCATCATTCTTAAAGCA---------GTAGGCGCAGCCGTAGGTAAT---GGGTCC------------------------------------TTCCTACGT---TTGCTCGTCGGTACGCTTGTCATGCTGATATTCGGTTACTTCGGTGAA---------GCT------------------GGC------GTG---------------------------------ATG------------------------------------------------------------------GACTCT------------------ACCATCGCA---TTCGTGATTGGTATGGTAGGTTGGGCTATTATCATCTACGAAATC---------------TTC------GCG---GGTGAAGCGTCCAAAGCGGCA------------GCG---GCGACGGAAAGCGTC---AAG---GCG---GCA---TTT---GGT---TACATG---CGTCTGATCGTCCTGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVGN-GS------------FLR-LLVGTLVMLIFGYFGE---A------G--V-----------M----------------------DS------TIA-FVIGMVGWAIIIYEI-----F--A-GEASKAA----A-ATESV-K-A-A-F-G-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928471 [unk-Proteo1-b] PRGD_OTU037_ef92c19b4e5ba81177296c1aeb404506 gb|KJ928471| PRGD_OTU037_ef92c19b4e5ba81177296c1aeb404506, putative proteorhodopsin gene, partial cds. PRGD_OTU037_ef92c19b4e5ba81177296c1aeb404506, putative proteorhodopsin gene, partial cds. KJ928471 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATTACAGTGCCGTTGTTGATGATCGAGTTTTTCATCATCCTTAAAGCAGTAGGTGCAGCTGTAGGCAATGGGTCATTCCTACGTTTGCTCGTCGGTACGCTTGTCATGCTGATATTCGGTTACTTCGGTGAGGCTGGTGTGATGAACTCTACCATCGCATTCTGGATTGGTATGGTAGGTTGGGCTGTTATCATCTACGAAATCTTCGCGGGTGAAGCGTCCAAAGCGGCAGCGGCAACGGAAAGCGTCAAGGCAGCATTTGGTTACATGCGCCTGATCGTCCTGGTT LITVPLLMIEFFIILKAVGAAVGNGSFLRLLVGTLVMLIFGYFGEAGVMNSTIAFWIGMVGWAVIIYEIFAGEASKAAAATESVKAAFGYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACAGTGCCGTTGTTGATGATCGAGTTTTTCATCATCCTTAAAGCA---------GTAGGTGCAGCTGTAGGCAAT---GGGTCA------------------------------------TTCCTACGT---TTGCTCGTCGGTACGCTTGTCATGCTGATATTCGGTTACTTCGGTGAG---------GCT------------------GGT------GTG---------------------------------ATG------------------------------------------------------------------AACTCT------------------ACCATCGCA---TTCTGGATTGGTATGGTAGGTTGGGCTGTTATCATCTACGAAATC---------------TTC------GCG---GGTGAAGCGTCCAAAGCGGCA------------GCG---GCAACGGAAAGCGTC---AAG---GCA---GCA---TTT---GGT---TACATG---CGCCTGATCGTCCTGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVGN-GS------------FLR-LLVGTLVMLIFGYFGE---A------G--V-----------M----------------------NS------TIA-FWIGMVGWAVIIYEI-----F--A-GEASKAA----A-ATESV-K-A-A-F-G-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928470 [unk-Proteo1-b] PRGD_OTU037_d4ab2bb82780e7871d24457ad53a1294 gb|KJ928470| PRGD_OTU037_d4ab2bb82780e7871d24457ad53a1294, putative proteorhodopsin gene, partial cds. PRGD_OTU037_d4ab2bb82780e7871d24457ad53a1294, putative proteorhodopsin gene, partial cds. KJ928470 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTCATTACCGTACCGCTTCTGATGATCGAGTTCTTTATTATCTTGAAAGCAGTTGGTGCTAACGTCGGCAATGGCTCCTTCCTACGTTTGTTAGTGGGCACCTTGGTCATGCTGATCTTTGGTTATCTTGGTGAAGCGGGTGTGATGAACTCAACCATTGCGTTCTGGATTGGTATGGTTGGTTGGGCTGTTATCATCTATGAGATCTTTGCCGGTGAAGCGTCAAAGGCTGCTGCGGCAACTGAAAGCGTAAAATCTGCTTTTGGCTACATGCGGTTGATCGTACTGGTA LITVPLLMIEFFIILKAVGANVGNGSFLRLLVGTLVMLIFGYLGEAGVMNSTIAFWIGMVGWAVIIYEIFAGEASKAAAATESVKSAFGYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATTACCGTACCGCTTCTGATGATCGAGTTCTTTATTATCTTGAAAGCA---------GTTGGTGCTAACGTCGGCAAT---GGCTCC------------------------------------TTCCTACGT---TTGTTAGTGGGCACCTTGGTCATGCTGATCTTTGGTTATCTTGGTGAA---------GCG------------------GGT------GTG---------------------------------ATG------------------------------------------------------------------AACTCA------------------ACCATTGCG---TTCTGGATTGGTATGGTTGGTTGGGCTGTTATCATCTATGAGATC---------------TTT------GCC---GGTGAAGCGTCAAAGGCTGCT------------GCG---GCAACTGAAAGCGTA---AAA---TCT---GCT---TTT---GGC---TACATG---CGGTTGATCGTACTGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGANVGN-GS------------FLR-LLVGTLVMLIFGYLGE---A------G--V-----------M----------------------NS------TIA-FWIGMVGWAVIIYEI-----F--A-GEASKAA----A-ATESV-K-S-A-F-G-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928467 [unk-Proteo1-b] PRGD_OTU037_a665849f0ac5aced6984643c795d63f1 gb|KJ928467| PRGD_OTU037_a665849f0ac5aced6984643c795d63f1, putative proteorhodopsin gene, partial cds. PRGD_OTU037_a665849f0ac5aced6984643c795d63f1, putative proteorhodopsin gene, partial cds. KJ928467 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683) CTGATAACCGTGCCGCTTCTGATGATTGAATTTTGGATCATCCTAAAAGCCGTTGGCGCGTCAGTCGGCAGTGGTTCATTTGTTAGACTCCTAGTGGGTACCTTGGTCATGTTGATCTTTGGATATCTTGGTGAAGCGAGTCTGATGAATTCAACCATCGCGTTCTGGATCGGTATGGTGGGTTGGGCGGTTATTATCTACGAGATCTTCGCAGGTGAAGCCTCAAAGGCTGCCGCTGCAACGGAAAGCGTAAAGTCCGCTTTCGGGTACATGCGTTTGATCGTGCTGGTG LITVPLLMIEFWIILKAVGASVGSGSFVRLLVGTLVMLIFGYLGEASLMNSTIAFWIGMVGWAVIIYEIFAGEASKAAAATESVKSAFGYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTGCCGCTTCTGATGATTGAATTTTGGATCATCCTAAAAGCC---------GTTGGCGCGTCAGTCGGCAGT---GGTTCA------------------------------------TTTGTTAGA---CTCCTAGTGGGTACCTTGGTCATGTTGATCTTTGGATATCTTGGTGAA---------GCG------------------AGT------CTG---------------------------------ATG------------------------------------------------------------------AATTCA------------------ACCATCGCG---TTCTGGATCGGTATGGTGGGTTGGGCGGTTATTATCTACGAGATC---------------TTC------GCA---GGTGAAGCCTCAAAGGCTGCC------------GCT---GCAACGGAAAGCGTA---AAG---TCC---GCT---TTC---GGG---TACATG---CGTTTGATCGTGCTGGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFWIILKA---VGASVGS-GS------------FVR-LLVGTLVMLIFGYLGE---A------S--L-----------M----------------------NS------TIA-FWIGMVGWAVIIYEI-----F--A-GEASKAA----A-ATESV-K-S-A-F-G-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928466 [unk-Proteo1-b] PRGD_OTU037_9ae00c17d7492ec7b088a0b32c606db2 gb|KJ928466| PRGD_OTU037_9ae00c17d7492ec7b088a0b32c606db2, putative proteorhodopsin gene, partial cds. PRGD_OTU037_9ae00c17d7492ec7b088a0b32c606db2, putative proteorhodopsin gene, partial cds. KJ928466 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 01-juil-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683) CTGATCACCGTACCCCTACTGATGATCGAATTTTACATCATCTTGAAAGCGGTCGGCGCGTCGGTTAGTAGTGGCTCATTCATGCGACTCCTTGGCGGCACACTGGTTATGCTGATTTTTGGCTACCTGGGTGAAGCGGGTGTGATGAACAGCACTATCGCATTTTGGCTAGGTATGGTTGGTTGGGCCATTATCATCTACGAAATTTTTGCAGGTGAAGCCTCCAAGGCAGCGGCGGCCAACGAAAGTGTCAAGTCAGCATTCAACTACATGAGGTTAATTGTTCTTGTA LITVPLLMIEFYIILKAVGASVSSGSFMRLLGGTLVMLIFGYLGEAGVMNSTIAFWLGMVGWAIIIYEIFAGEASKAAAANESVKSAFNYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTACCCCTACTGATGATCGAATTTTACATCATCTTGAAAGCG---------GTCGGCGCGTCGGTTAGTAGT---GGCTCA------------------------------------TTCATGCGA---CTCCTTGGCGGCACACTGGTTATGCTGATTTTTGGCTACCTGGGTGAA---------GCG------------------GGT------GTG---------------------------------ATG------------------------------------------------------------------AACAGC------------------ACTATCGCA---TTTTGGCTAGGTATGGTTGGTTGGGCCATTATCATCTACGAAATT---------------TTT------GCA---GGTGAAGCCTCCAAGGCAGCG------------GCG---GCCAACGAAAGTGTC---AAG---TCA---GCA---TTC---AAC---TACATG---AGGTTAATTGTTCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYIILKA---VGASVSS-GS------------FMR-LLGGTLVMLIFGYLGE---A------G--V-----------M----------------------NS------TIA-FWLGMVGWAIIIYEI-----F--A-GEASKAA----A-ANESV-K-S-A-F-N-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928457 [unk-Proteo1-b] PRGD_OTU037_4950a2a57a2b3741f6691bbb3078bd71 gb|KJ928457| PRGD_OTU037_4950a2a57a2b3741f6691bbb3078bd71, putative proteorhodopsin gene, partial cds. PRGD_OTU037_4950a2a57a2b3741f6691bbb3078bd71, putative proteorhodopsin gene, partial cds. KJ928457 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683) CTCATAACCGTGCCGCTTCTGATGATCGAATTTTGGATCATCCTAAAAGCCGTTGGCGCGTCAGTTGGCAGTGGTTCATTTGTTAGGCTCCTAGCGGGCACCTTGGTCATGCTGGTTTTTGGCTATTTAGGCGAAGCTGGTGTCATGGATGCGACCTTAGGTTTCTGGATTGGAATGGTAGGTTGGGCCGTAATTATCTATGAAATCTTCGCAGGCGAAGCTGGTAAAGCTGCGGCAGCGACAGAGAGCGTTAAAGCTGCATTCGGGTATATGAGGCTGATCGTATTA LITVPLLMIEFWIILKAVGASVGSGSFVRLLAGTLVMLVFGYLGEAGVMDATLGFWIGMVGWAVIIYEIFAGEAGKAAAATESVKAAFGYMRLIVL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATAACCGTGCCGCTTCTGATGATCGAATTTTGGATCATCCTAAAAGCC---------GTTGGCGCGTCAGTTGGCAGT---GGTTCA------------------------------------TTTGTTAGG---CTCCTAGCGGGCACCTTGGTCATGCTGGTTTTTGGCTATTTAGGCGAA---------GCT------------------GGT------GTC---------------------------------ATG------------------------------------------------------------------GATGCG------------------ACCTTAGGT---TTCTGGATTGGAATGGTAGGTTGGGCCGTAATTATCTATGAAATC---------------TTC------GCA---GGCGAAGCTGGTAAAGCTGCG------------GCA---GCGACAGAGAGCGTT---AAA---GCT---GCA---TTC---GGG---TATATG---AGGCTGATCGTATTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFWIILKA---VGASVGS-GS------------FVR-LLAGTLVMLVFGYLGE---A------G--V-----------M----------------------DA------TLG-FWIGMVGWAVIIYEI-----F--A-GEAGKAA----A-ATESV-K-A-A-F-G-YM-RLIVL--------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928465 [unk-Proteo1-b] PRGD_OTU037_85821582a08df6f066c66c59addd0617 gb|KJ928465| PRGD_OTU037_85821582a08df6f066c66c59addd0617, putative proteorhodopsin gene, partial cds. PRGD_OTU037_85821582a08df6f066c66c59addd0617, putative proteorhodopsin gene, partial cds. KJ928465 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683) CTCATAACCGTGCCGCTTCTGATGATCGAATTTTGGATCATCCTAAAAGCCGTTGGCGCGTCAGTTGGCAGTGGTTCATTTGTTAGGCTCCTAGCGGGCACCTTGGTCATGCTGGTTTTTGGCTATTTAGGCGAAGCTGGTGTCATGGATGCGACCTTAGGTTTCTGGATTGGAATGGTAGGTTGGGCCGTAATTATCTATGAAATCTTCGCAGGCGAAGCTGGTAAAGCTGCGGCAGCAACCGAGAGCGTTAAAGCTGCATTCGGGTATATGAGGCTGATCGTATTAGTG LITVPLLMIEFWIILKAVGASVGSGSFVRLLAGTLVMLVFGYLGEAGVMDATLGFWIGMVGWAVIIYEIFAGEAGKAAAATESVKAAFGYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATAACCGTGCCGCTTCTGATGATCGAATTTTGGATCATCCTAAAAGCC---------GTTGGCGCGTCAGTTGGCAGT---GGTTCA------------------------------------TTTGTTAGG---CTCCTAGCGGGCACCTTGGTCATGCTGGTTTTTGGCTATTTAGGCGAA---------GCT------------------GGT------GTC---------------------------------ATG------------------------------------------------------------------GATGCG------------------ACCTTAGGT---TTCTGGATTGGAATGGTAGGTTGGGCCGTAATTATCTATGAAATC---------------TTC------GCA---GGCGAAGCTGGTAAAGCTGCG------------GCA---GCAACCGAGAGCGTT---AAA---GCT---GCA---TTC---GGG---TATATG---AGGCTGATCGTATTAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFWIILKA---VGASVGS-GS------------FVR-LLAGTLVMLVFGYLGE---A------G--V-----------M----------------------DA------TLG-FWIGMVGWAVIIYEI-----F--A-GEAGKAA----A-ATESV-K-A-A-F-G-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928456 [unk-Proteo1-b] PRGD_OTU037_374e9a7db46b6836d4de4b5a8643ca89 gb|KJ928456| PRGD_OTU037_374e9a7db46b6836d4de4b5a8643ca89, putative proteorhodopsin gene, partial cds. PRGD_OTU037_374e9a7db46b6836d4de4b5a8643ca89, putative proteorhodopsin gene, partial cds. KJ928456 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCATAACCGTGCCGCTTCTGATGATCGAATTTTGGATCATCCTAAAAGCCGTTGGCGCGTCAGTTGGCAGTGGTTCATTTGTTAGGCTCCTAGCGGGCACCTTGGTCATGCTGGTTTTTGGCTATTTAGGCGAAGCTGGTGTAATGGATGCGACCTTAGGTTTCTGGATTGGAATGGTAGGTTGGGCCGTAATTATCTATGAGATCTTCGCAGGTGAAGCTGGTAAAGCTGCGGCAGCGACAGAGAGCGTTAAAGCTGCATTCGGGTATATGAGGCTGATCGTATTAGTG LITVPLLMIEFWIILKAVGASVGSGSFVRLLAGTLVMLVFGYLGEAGVMDATLGFWIGMVGWAVIIYEIFAGEAGKAAAATESVKAAFGYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATAACCGTGCCGCTTCTGATGATCGAATTTTGGATCATCCTAAAAGCC---------GTTGGCGCGTCAGTTGGCAGT---GGTTCA------------------------------------TTTGTTAGG---CTCCTAGCGGGCACCTTGGTCATGCTGGTTTTTGGCTATTTAGGCGAA---------GCT------------------GGT------GTA---------------------------------ATG------------------------------------------------------------------GATGCG------------------ACCTTAGGT---TTCTGGATTGGAATGGTAGGTTGGGCCGTAATTATCTATGAGATC---------------TTC------GCA---GGTGAAGCTGGTAAAGCTGCG------------GCA---GCGACAGAGAGCGTT---AAA---GCT---GCA---TTC---GGG---TATATG---AGGCTGATCGTATTAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFWIILKA---VGASVGS-GS------------FVR-LLAGTLVMLVFGYLGE---A------G--V-----------M----------------------DA------TLG-FWIGMVGWAVIIYEI-----F--A-GEAGKAA----A-ATESV-K-A-A-F-G-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928464 [unk-Proteo1-b] PRGD_OTU037_855d771362939506c1e480e8673ab708 gb|KJ928464| PRGD_OTU037_855d771362939506c1e480e8673ab708, putative proteorhodopsin gene, partial cds. PRGD_OTU037_855d771362939506c1e480e8673ab708, putative proteorhodopsin gene, partial cds. KJ928464 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) CTCATAACCGTGCCGCTTCTGATGATCGAATTTTGGATCATCCTAAAAGCCGTTGGCGCGTCAGTTGGCAGTGGTTCATTTGTTAGGCTCCTAGCGGGCACCTTGGTCATGCTGGTTTTTGGCTATCTAGGCGAAGCCGGTGTCATGGATGCGACCTTAGGTTTCTGGATTGGAATGGTAGGTTGGGCCGTAATTATCTATGAGATCTTCGCAGGCGAAGCTGGCAAAGCTGCGGCAGCGACAGAGAGCGTTAAAGCTGCATTCGGGTATATGAGGCTGATCGTATTAGTG LITVPLLMIEFWIILKAVGASVGSGSFVRLLAGTLVMLVFGYLGEAGVMDATLGFWIGMVGWAVIIYEIFAGEAGKAAAATESVKAAFGYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATAACCGTGCCGCTTCTGATGATCGAATTTTGGATCATCCTAAAAGCC---------GTTGGCGCGTCAGTTGGCAGT---GGTTCA------------------------------------TTTGTTAGG---CTCCTAGCGGGCACCTTGGTCATGCTGGTTTTTGGCTATCTAGGCGAA---------GCC------------------GGT------GTC---------------------------------ATG------------------------------------------------------------------GATGCG------------------ACCTTAGGT---TTCTGGATTGGAATGGTAGGTTGGGCCGTAATTATCTATGAGATC---------------TTC------GCA---GGCGAAGCTGGCAAAGCTGCG------------GCA---GCGACAGAGAGCGTT---AAA---GCT---GCA---TTC---GGG---TATATG---AGGCTGATCGTATTAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFWIILKA---VGASVGS-GS------------FVR-LLAGTLVMLVFGYLGE---A------G--V-----------M----------------------DA------TLG-FWIGMVGWAVIIYEI-----F--A-GEAGKAA----A-ATESV-K-A-A-F-G-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928459 [unk-Proteo1-b] PRGD_OTU037_4dcebc2c5c134408953df96b45b4ced4 gb|KJ928459| PRGD_OTU037_4dcebc2c5c134408953df96b45b4ced4, putative proteorhodopsin gene, partial cds. PRGD_OTU037_4dcebc2c5c134408953df96b45b4ced4, putative proteorhodopsin gene, partial cds. KJ928459 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (33.935, 18.508), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) CTGATAACCGTGCCGCTTCTGATGATTGAATTTTGGATCATTCTAAAAGCCGTTGGCGCGTCAGTCGGCAGTGGTTCATTTATAAGACTCTTAGCGGGTACCTTGGTCATGCTGATTTTTGGCTATCTAGGCGAAGCCGGTGTTATGGATGCGACCTTAGGTTTCTGGATCGGAATGGTAGGTTGGGCCGTAATTATCTATGAGATCTTCGCAGGTGAAGCTGGCAAAGCTGCGGCAGCAACCGAGAGCGTTAAAGCTGCATTCGGGTATATGAGGCTGATCGTATTAGTG LITVPLLMIEFWIILKAVGASVGSGSFIRLLAGTLVMLIFGYLGEAGVMDATLGFWIGMVGWAVIIYEIFAGEAGKAAAATESVKAAFGYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTGCCGCTTCTGATGATTGAATTTTGGATCATTCTAAAAGCC---------GTTGGCGCGTCAGTCGGCAGT---GGTTCA------------------------------------TTTATAAGA---CTCTTAGCGGGTACCTTGGTCATGCTGATTTTTGGCTATCTAGGCGAA---------GCC------------------GGT------GTT---------------------------------ATG------------------------------------------------------------------GATGCG------------------ACCTTAGGT---TTCTGGATCGGAATGGTAGGTTGGGCCGTAATTATCTATGAGATC---------------TTC------GCA---GGTGAAGCTGGCAAAGCTGCG------------GCA---GCAACCGAGAGCGTT---AAA---GCT---GCA---TTC---GGG---TATATG---AGGCTGATCGTATTAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFWIILKA---VGASVGS-GS------------FIR-LLAGTLVMLIFGYLGE---A------G--V-----------M----------------------DA------TLG-FWIGMVGWAVIIYEI-----F--A-GEAGKAA----A-ATESV-K-A-A-F-G-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928458 [unk-Proteo1-b] PRGD_OTU037_4d2a38fb1ead799480c53e5d05cd5e1a gb|KJ928458| PRGD_OTU037_4d2a38fb1ead799480c53e5d05cd5e1a, putative proteorhodopsin gene, partial cds. PRGD_OTU037_4d2a38fb1ead799480c53e5d05cd5e1a, putative proteorhodopsin gene, partial cds. KJ928458 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTGATAACCGTGCCGCTTCTGATGATTGAATTTTGGATCATTCTAAAAGCCGTTGGCGCGTCAGTCGGCAGTGGTTCATTTGTTAGGCTCCTAGCGGGCACCTTGGTCATGCTGATTTTTGGCTATCTAGGCGAAGCCGGTGTTATGGATGCGACCTTAGGTTTCTGGATCGGAATGGTAGGTTGGGCCGTAATTATCTATGAGATCTTCGCAGGTGAAGCTGGCAAAGCTGCGGCAGCAACCGAGAGCGTTAAAGCTGCATTCGGGTATATGAGGCTGATCGTATTAGTG LITVPLLMIEFWIILKAVGASVGSGSFVRLLAGTLVMLIFGYLGEAGVMDATLGFWIGMVGWAVIIYEIFAGEAGKAAAATESVKAAFGYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTGCCGCTTCTGATGATTGAATTTTGGATCATTCTAAAAGCC---------GTTGGCGCGTCAGTCGGCAGT---GGTTCA------------------------------------TTTGTTAGG---CTCCTAGCGGGCACCTTGGTCATGCTGATTTTTGGCTATCTAGGCGAA---------GCC------------------GGT------GTT---------------------------------ATG------------------------------------------------------------------GATGCG------------------ACCTTAGGT---TTCTGGATCGGAATGGTAGGTTGGGCCGTAATTATCTATGAGATC---------------TTC------GCA---GGTGAAGCTGGCAAAGCTGCG------------GCA---GCAACCGAGAGCGTT---AAA---GCT---GCA---TTC---GGG---TATATG---AGGCTGATCGTATTAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFWIILKA---VGASVGS-GS------------FVR-LLAGTLVMLIFGYLGE---A------G--V-----------M----------------------DA------TLG-FWIGMVGWAVIIYEI-----F--A-GEAGKAA----A-ATESV-K-A-A-F-G-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928454 [unk-Proteo1-b] PRGD_OTU037_30251bd047d814141bb85d41e16d8069 gb|KJ928454| PRGD_OTU037_30251bd047d814141bb85d41e16d8069, putative proteorhodopsin gene, partial cds. PRGD_OTU037_30251bd047d814141bb85d41e16d8069, putative proteorhodopsin gene, partial cds. KJ928454 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185) CTCATAACCGTGCCGCTTCTGATGATCGAATTTTGGATCATCTTAAAAGCTGTTGGCGCGTCAGTTGGCAGTGGTTCATTTGTTAGGCTCCTAGCGGGCACCTTGGTCATGCTGGTTTTTGGCTATCTAGGCGAAGCCGGTGTCATGGATGCGACCTTAGGTTTCTGGATTGGAATGGTAGGTTGGGCCGTAATTATCTATGAGATCTTCGCAGGCGAAGCTGGCAAAGCTGCGGCAGCGACAGAGAGCGTTAAAGCTGCATTCGGGTATATGAGGCTGATCGTATTAGTG LITVPLLMIEFWIILKAVGASVGSGSFVRLLAGTLVMLVFGYLGEAGVMDATLGFWIGMVGWAVIIYEIFAGEAGKAAAATESVKAAFGYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATAACCGTGCCGCTTCTGATGATCGAATTTTGGATCATCTTAAAAGCT---------GTTGGCGCGTCAGTTGGCAGT---GGTTCA------------------------------------TTTGTTAGG---CTCCTAGCGGGCACCTTGGTCATGCTGGTTTTTGGCTATCTAGGCGAA---------GCC------------------GGT------GTC---------------------------------ATG------------------------------------------------------------------GATGCG------------------ACCTTAGGT---TTCTGGATTGGAATGGTAGGTTGGGCCGTAATTATCTATGAGATC---------------TTC------GCA---GGCGAAGCTGGCAAAGCTGCG------------GCA---GCGACAGAGAGCGTT---AAA---GCT---GCA---TTC---GGG---TATATG---AGGCTGATCGTATTAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFWIILKA---VGASVGS-GS------------FVR-LLAGTLVMLVFGYLGE---A------G--V-----------M----------------------DA------TLG-FWIGMVGWAVIIYEI-----F--A-GEAGKAA----A-ATESV-K-A-A-F-G-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928460 [unk-Proteo1-b] PRGD_OTU037_610723a89b64b038717df492ecca92c0 gb|KJ928460| PRGD_OTU037_610723a89b64b038717df492ecca92c0, putative proteorhodopsin gene, partial cds. PRGD_OTU037_610723a89b64b038717df492ecca92c0, putative proteorhodopsin gene, partial cds. KJ928460 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCATAACCGTGCCGCTTCTGATGATCGAATTTTGGATTATCTTAAAAGCCGTTGGCGCGTCAGTTGGCAGTGGTTCATTTGTTCGGCTCCTAGCGGGCACCTTGGTCATGCTGGTTTTTGGCTATCTAGGCGAAGCCGGTGTCATGGATGCGACCTTAGGTTTCTGGATTGGAATGGTAGGTTGGGCCGTAATTATCTATGAGATCTTCGCAGGCGAAGCTGGCAAAGCTGCGGCAGCGACAGAGAGCGTTAAAGCTGCATTCGGGTATATGAGGCTGATCGTATTAGTG LITVPLLMIEFWIILKAVGASVGSGSFVRLLAGTLVMLVFGYLGEAGVMDATLGFWIGMVGWAVIIYEIFAGEAGKAAAATESVKAAFGYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATAACCGTGCCGCTTCTGATGATCGAATTTTGGATTATCTTAAAAGCC---------GTTGGCGCGTCAGTTGGCAGT---GGTTCA------------------------------------TTTGTTCGG---CTCCTAGCGGGCACCTTGGTCATGCTGGTTTTTGGCTATCTAGGCGAA---------GCC------------------GGT------GTC---------------------------------ATG------------------------------------------------------------------GATGCG------------------ACCTTAGGT---TTCTGGATTGGAATGGTAGGTTGGGCCGTAATTATCTATGAGATC---------------TTC------GCA---GGCGAAGCTGGCAAAGCTGCG------------GCA---GCGACAGAGAGCGTT---AAA---GCT---GCA---TTC---GGG---TATATG---AGGCTGATCGTATTAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFWIILKA---VGASVGS-GS------------FVR-LLAGTLVMLVFGYLGE---A------G--V-----------M----------------------DA------TLG-FWIGMVGWAVIIYEI-----F--A-GEAGKAA----A-ATESV-K-A-A-F-G-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928660 [unk-Proteo1-b] PRGD_OTU046_otuREP_ab0b1eb7c80f8a1314caabd179436d91 gb|KJ928660| PRGD_OTU046_otuREP_ab0b1eb7c80f8a1314caabd179436d91, putative proteorhodopsin gene, partial cds. PRGD_OTU046_otuREP_ab0b1eb7c80f8a1314caabd179436d91, putative proteorhodopsin gene, partial cds. KJ928660 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATAACCGTGCCGTTATTGATGATCGAATTCTTCCTGATACTCAAAGCGGTTGGTGCCGCGGTCGGTACAGGTTCATTCTTACGCCTTCTGGTTGGCACCTTGGTCATGCTTATATTCGGCTACCTTGGAGAGGCGGAGTTGATGAACGTCACCCTCGCATTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATTTACGCGGGCGCTGCTGGCAGCGCGGCTAAAGTAGCCTCACCCGCTGTCGCATCAGCATTTAACTATATGAGACTCATTGTGCTTGTA LITVPLLMIEFFLILKAVGAAVGTGSFLRLLVGTLVMLIFGYLGEAELMNVTLAFWIGMAGWGVIIYEIYAGAAGSAAKVASPAVASAFNYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACCGTGCCGTTATTGATGATCGAATTCTTCCTGATACTCAAAGCG---------GTTGGTGCCGCGGTCGGTACA---GGTTCA------------------------------------TTCTTACGC---CTTCTGGTTGGCACCTTGGTCATGCTTATATTCGGCTACCTTGGAGAG---------GCG------------------GAG------TTG---------------------------------ATG------------------------------------------------------------------AACGTC------------------ACCCTCGCA---TTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATT---------------TAC------GCG---GGCGCTGCTGGCAGCGCGGCT---AAA------GTA---GCCTCACCCGCTGTC---GCA---TCA---GCA---TTT---AAC---TATATG---AGACTCATTGTGCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFLILKA---VGAAVGT-GS------------FLR-LLVGTLVMLIFGYLGE---A------E--L-----------M----------------------NV------TLA-FWIGMAGWGVIIYEI-----Y--A-GAAGSAA-K--V-ASPAV-A-S-A-F-N-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928674 [unk-Proteo1-b] PRGD_OTU046_cbbbf45180984fd18c9e1ccbb7eee8ba gb|KJ928674| PRGD_OTU046_cbbbf45180984fd18c9e1ccbb7eee8ba, putative proteorhodopsin gene, partial cds. PRGD_OTU046_cbbbf45180984fd18c9e1ccbb7eee8ba, putative proteorhodopsin gene, partial cds. KJ928674 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATAACAGTGCCGTTATTGATGATCGAATTCTTCCTGATACTCAAAGCGGTTGGTGCCGCGGTCGGTACAGGTTCATTCTTACGCCTTCTGGTTGGCACCTTGGTCATGCTTATATTCGGCTACCTTGGAGAGGCGGAGTTGATGAACGTCACCCTCGCATTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATTTACGCGGGCGCTGCTGGCAGCGCGGCTAAAGTAGCCTCACCCGCAGTCGCGTCAGCATTCAACTATATGAGACTCATTGTGCTTGTA LITVPLLMIEFFLILKAVGAAVGTGSFLRLLVGTLVMLIFGYLGEAELMNVTLAFWIGMAGWGVIIYEIYAGAAGSAAKVASPAVASAFNYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACAGTGCCGTTATTGATGATCGAATTCTTCCTGATACTCAAAGCG---------GTTGGTGCCGCGGTCGGTACA---GGTTCA------------------------------------TTCTTACGC---CTTCTGGTTGGCACCTTGGTCATGCTTATATTCGGCTACCTTGGAGAG---------GCG------------------GAG------TTG---------------------------------ATG------------------------------------------------------------------AACGTC------------------ACCCTCGCA---TTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATT---------------TAC------GCG---GGCGCTGCTGGCAGCGCGGCT---AAA------GTA---GCCTCACCCGCAGTC---GCG---TCA---GCA---TTC---AAC---TATATG---AGACTCATTGTGCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFLILKA---VGAAVGT-GS------------FLR-LLVGTLVMLIFGYLGE---A------E--L-----------M----------------------NV------TLA-FWIGMAGWGVIIYEI-----Y--A-GAAGSAA-K--V-ASPAV-A-S-A-F-N-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928668 [unk-Proteo1-b] PRGD_OTU046_948c5ebdb96c2bb11717ecea4942dbeb gb|KJ928668| PRGD_OTU046_948c5ebdb96c2bb11717ecea4942dbeb, putative proteorhodopsin gene, partial cds. PRGD_OTU046_948c5ebdb96c2bb11717ecea4942dbeb, putative proteorhodopsin gene, partial cds. KJ928668 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -33.28, 45.35) TTGATAACCGTGCCGTTATTGATGATCGAATTCTTCCTGATACTCAAAGCGGTTGGTGCCGCGGTAGGTACAGGTTCATTCTTACGACTTCTGGTTGGCACCTTGGTCATGCTTATTTTCGGCTACCTTGGAGAGGCGGAGTTGATGAACGTCACCCTCGCATTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATCTACGCGGGCGATGCTGGCAGTGCGGCTAAAGTAGCCTCACCCGCTGTCGCATCAGCATTCAACTATATGAGACTCATTGTGCTTGTA LITVPLLMIEFFLILKAVGAAVGTGSFLRLLVGTLVMLIFGYLGEAELMNVTLAFWIGMAGWGVIIYEIYAGDAGSAAKVASPAVASAFNYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACCGTGCCGTTATTGATGATCGAATTCTTCCTGATACTCAAAGCG---------GTTGGTGCCGCGGTAGGTACA---GGTTCA------------------------------------TTCTTACGA---CTTCTGGTTGGCACCTTGGTCATGCTTATTTTCGGCTACCTTGGAGAG---------GCG------------------GAG------TTG---------------------------------ATG------------------------------------------------------------------AACGTC------------------ACCCTCGCA---TTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATC---------------TAC------GCG---GGCGATGCTGGCAGTGCGGCT---AAA------GTA---GCCTCACCCGCTGTC---GCA---TCA---GCA---TTC---AAC---TATATG---AGACTCATTGTGCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFLILKA---VGAAVGT-GS------------FLR-LLVGTLVMLIFGYLGE---A------E--L-----------M----------------------NV------TLA-FWIGMAGWGVIIYEI-----Y--A-GDAGSAA-K--V-ASPAV-A-S-A-F-N-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928670 [unk-Proteo1-b] PRGD_OTU046_9c9aead11aa41706c80d8d95da48473d gb|KJ928670| PRGD_OTU046_9c9aead11aa41706c80d8d95da48473d, putative proteorhodopsin gene, partial cds. PRGD_OTU046_9c9aead11aa41706c80d8d95da48473d, putative proteorhodopsin gene, partial cds. KJ928670 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) TTGATAACAGTGCCGTTATTGATGATCGAATTCTTCCTGATACTCAAAGCGGTTGGTGCCGCGGTCGGTACAGGTTCATTCTTACGCCTTCTTGTTGGCACATTGGTTATGCTTATCTTTGGCTACCTTGGAGAGGCGGAGTTGATGAACGTCACCCTCGCATTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATCTACGCGGGCGATGCTGGCAGTGCGGCTAAAGTAGCCTCACCCGCTGTCGCATCAGCATTCAACTATATGAGACTCATTGTGCTTGTA LITVPLLMIEFFLILKAVGAAVGTGSFLRLLVGTLVMLIFGYLGEAELMNVTLAFWIGMAGWGVIIYEIYAGDAGSAAKVASPAVASAFNYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACAGTGCCGTTATTGATGATCGAATTCTTCCTGATACTCAAAGCG---------GTTGGTGCCGCGGTCGGTACA---GGTTCA------------------------------------TTCTTACGC---CTTCTTGTTGGCACATTGGTTATGCTTATCTTTGGCTACCTTGGAGAG---------GCG------------------GAG------TTG---------------------------------ATG------------------------------------------------------------------AACGTC------------------ACCCTCGCA---TTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATC---------------TAC------GCG---GGCGATGCTGGCAGTGCGGCT---AAA------GTA---GCCTCACCCGCTGTC---GCA---TCA---GCA---TTC---AAC---TATATG---AGACTCATTGTGCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFLILKA---VGAAVGT-GS------------FLR-LLVGTLVMLIFGYLGE---A------E--L-----------M----------------------NV------TLA-FWIGMAGWGVIIYEI-----Y--A-GDAGSAA-K--V-ASPAV-A-S-A-F-N-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928662 [unk-Proteo1-b] PRGD_OTU046_0cfa359329d1d8cdaa54d3e73c0de2ed gb|KJ928662| PRGD_OTU046_0cfa359329d1d8cdaa54d3e73c0de2ed, putative proteorhodopsin gene, partial cds. PRGD_OTU046_0cfa359329d1d8cdaa54d3e73c0de2ed, putative proteorhodopsin gene, partial cds. KJ928662 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683) TTGATAACAGTACCGTTATTAATGATCGAATTCTTCCTGATACTCAAAGCGGTTGGCGCCGCGGTCGGTACAGGTTCATTCTTACGCCTTCTGCTTGGCACATTGGTCATGCTCATCTTCGGCTACCTTGGAGAGGCGGAGTTAATGAACGTTACCCTCGCATTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATTTACGCGGGCGCTGCTGGCAGCGCGGCTAAAGTAGCCTCACCCGCTGTTGCATCAGCGTTCAACTACATGAGACTCATTGTGCTTGTA LITVPLLMIEFFLILKAVGAAVGTGSFLRLLLGTLVMLIFGYLGEAELMNVTLAFWIGMAGWGVIIYEIYAGAAGSAAKVASPAVASAFNYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACAGTACCGTTATTAATGATCGAATTCTTCCTGATACTCAAAGCG---------GTTGGCGCCGCGGTCGGTACA---GGTTCA------------------------------------TTCTTACGC---CTTCTGCTTGGCACATTGGTCATGCTCATCTTCGGCTACCTTGGAGAG---------GCG------------------GAG------TTA---------------------------------ATG------------------------------------------------------------------AACGTT------------------ACCCTCGCA---TTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATT---------------TAC------GCG---GGCGCTGCTGGCAGCGCGGCT------------AAAGTAGCCTCACCCGCTGTT---GCA---TCA---GCG---TTC---AAC---TACATG---AGACTCATTGTGCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFLILKA---VGAAVGT-GS------------FLR-LLLGTLVMLIFGYLGE---A------E--L-----------M----------------------NV------TLA-FWIGMAGWGVIIYEI-----Y--A-GAAGSAA----KVASPAV-A-S-A-F-N-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928671 [unk-Proteo1-b] PRGD_OTU046_a547a7c31bf9501995643ec5cadc3e53 gb|KJ928671| PRGD_OTU046_a547a7c31bf9501995643ec5cadc3e53, putative proteorhodopsin gene, partial cds. PRGD_OTU046_a547a7c31bf9501995643ec5cadc3e53, putative proteorhodopsin gene, partial cds. KJ928671 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683) TTGATAACAGTACCGTTATTAATGATCGAATTCTTCCTGATACTCAAAGCGGTTGGCGCCGCGGTCGGTACAGGTTCATTCTTACGCCTTCTGCTTGGCACATTGGTCATGCTCATTTTCGGCTACCTTGGAGAGGCGGAGTTAATGAACGTTACCCTCGCATTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATTTACGCAGGCGCTGCTGGCAGCGCGGCTAAAGTAGCCTCACCCGCTGTTGCATCAGCGTTCAACTACATGAGACTCATTGTGCTTGTG LITVPLLMIEFFLILKAVGAAVGTGSFLRLLLGTLVMLIFGYLGEAELMNVTLAFWIGMAGWGVIIYEIYAGAAGSAAKVASPAVASAFNYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACAGTACCGTTATTAATGATCGAATTCTTCCTGATACTCAAAGCG---------GTTGGCGCCGCGGTCGGTACA---GGTTCA------------------------------------TTCTTACGC---CTTCTGCTTGGCACATTGGTCATGCTCATTTTCGGCTACCTTGGAGAG---------GCG------------------GAG------TTA---------------------------------ATG------------------------------------------------------------------AACGTT------------------ACCCTCGCA---TTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATT---------------TAC------GCA---GGCGCTGCTGGCAGCGCGGCT------------AAAGTAGCCTCACCCGCTGTT---GCA---TCA---GCG---TTC---AAC---TACATG---AGACTCATTGTGCTTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFLILKA---VGAAVGT-GS------------FLR-LLLGTLVMLIFGYLGE---A------E--L-----------M----------------------NV------TLA-FWIGMAGWGVIIYEI-----Y--A-GAAGSAA----KVASPAV-A-S-A-F-N-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928663 [unk-Proteo1-b] PRGD_OTU046_2a969eaaabf2ba3ecbad48eb7e364c7f gb|KJ928663| PRGD_OTU046_2a969eaaabf2ba3ecbad48eb7e364c7f, putative proteorhodopsin gene, partial cds. PRGD_OTU046_2a969eaaabf2ba3ecbad48eb7e364c7f, putative proteorhodopsin gene, partial cds. KJ928663 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683) TTGATAACAGTACCGTTATTAATGATCGAATTCTTCCTGATACTCAAAGCGGTTGGCGCCGCGGTAGGTACAGGTTCATTCTTACGCCTTCTGCTTGGCACATTGGTCATGCTCATTTTCGGCTACCTTGGAGAGGCAGAGTTAATGAACGTCACCCTCGCATTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATTTACGCGGGCGCTGCTGGCAGCGCGGCTAAAGTAGCCTCACCGGCTGTCGCATCAGCATTCAACTACATGAGACTCATTGTGCTTGTA LITVPLLMIEFFLILKAVGAAVGTGSFLRLLLGTLVMLIFGYLGEAELMNVTLAFWIGMAGWGVIIYEIYAGAAGSAAKVASPAVASAFNYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACAGTACCGTTATTAATGATCGAATTCTTCCTGATACTCAAAGCG---------GTTGGCGCCGCGGTAGGTACA---GGTTCA------------------------------------TTCTTACGC---CTTCTGCTTGGCACATTGGTCATGCTCATTTTCGGCTACCTTGGAGAG---------GCA------------------GAG------TTA---------------------------------ATG------------------------------------------------------------------AACGTC------------------ACCCTCGCA---TTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATT---------------TAC------GCG---GGCGCTGCTGGCAGCGCGGCT------------AAAGTAGCCTCACCGGCTGTC---GCA---TCA---GCA---TTC---AAC---TACATG---AGACTCATTGTGCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFLILKA---VGAAVGT-GS------------FLR-LLLGTLVMLIFGYLGE---A------E--L-----------M----------------------NV------TLA-FWIGMAGWGVIIYEI-----Y--A-GAAGSAA----KVASPAV-A-S-A-F-N-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928669 [unk-Proteo1-b] PRGD_OTU046_97c83232f9436d5cd5af11da5c317f1c gb|KJ928669| PRGD_OTU046_97c83232f9436d5cd5af11da5c317f1c, putative proteorhodopsin gene, partial cds. PRGD_OTU046_97c83232f9436d5cd5af11da5c317f1c, putative proteorhodopsin gene, partial cds. KJ928669 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATAACAGTACCGTTATTAATGATCGAATTCTTCCTGATACTCAAAGCGGTTGGCGCCGCGGTAGGTACAGGTTCATTCTTACGCCTTCTGCTTGGCACATTGGTCATGCTCATTTACGGCTACCTTGGAGAGGCGGAATTAATGAACGTCACCCTCGCGTTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATTTACGCGGGCGCTGCTGGCAGCGCGGCTAAAGTAGCCTCACCGGCTGTCGCATCAGCATTCAACTACATGAGACTCATTGTGCTTGTC LITVPLLMIEFFLILKAVGAAVGTGSFLRLLLGTLVMLIYGYLGEAELMNVTLAFWIGMAGWGVIIYEIYAGAAGSAAKVASPAVASAFNYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACAGTACCGTTATTAATGATCGAATTCTTCCTGATACTCAAAGCG---------GTTGGCGCCGCGGTAGGTACA---GGTTCA------------------------------------TTCTTACGC---CTTCTGCTTGGCACATTGGTCATGCTCATTTACGGCTACCTTGGAGAG---------GCG------------------GAA------TTA---------------------------------ATG------------------------------------------------------------------AACGTC------------------ACCCTCGCG---TTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATT---------------TAC------GCG---GGCGCTGCTGGCAGCGCGGCT------------AAAGTAGCCTCACCGGCTGTC---GCA---TCA---GCA---TTC---AAC---TACATG---AGACTCATTGTGCTTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFLILKA---VGAAVGT-GS------------FLR-LLLGTLVMLIYGYLGE---A------E--L-----------M----------------------NV------TLA-FWIGMAGWGVIIYEI-----Y--A-GAAGSAA----KVASPAV-A-S-A-F-N-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928681 [unk-Proteo1-b] PRGD_OTU046_fe71ad390c639dcc5b9c53e517f1ad3b gb|KJ928681| PRGD_OTU046_fe71ad390c639dcc5b9c53e517f1ad3b, putative proteorhodopsin gene, partial cds. PRGD_OTU046_fe71ad390c639dcc5b9c53e517f1ad3b, putative proteorhodopsin gene, partial cds. KJ928681 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833) TTGATAACAGTACCGTTATTAATGATCGAATTCTTCCTGATACTCAAAGCGGTTGGTGCCGCGGTAGGTACAGGTTCATTCTTACGCCTTTTGGTTGGCACCCTGGTCATGCTCATTTTCGGCTACCTTGGAGAGGCGGAGTTGATGAACGTCACCCTCGCATTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATTTACGCGGGCGCTGCTGGCAGCGCGGCTAAAGTAGCCTCACCCGCTGTCGCTTCAGCATTCAACTACATGCGACTCATTGTGCTTGTA LITVPLLMIEFFLILKAVGAAVGTGSFLRLLVGTLVMLIFGYLGEAELMNVTLAFWIGMAGWGVIIYEIYAGAAGSAAKVASPAVASAFNYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACAGTACCGTTATTAATGATCGAATTCTTCCTGATACTCAAAGCG---------GTTGGTGCCGCGGTAGGTACA---GGTTCA------------------------------------TTCTTACGC---CTTTTGGTTGGCACCCTGGTCATGCTCATTTTCGGCTACCTTGGAGAG---------GCG------------------GAG------TTG---------------------------------ATG------------------------------------------------------------------AACGTC------------------ACCCTCGCA---TTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATT---------------TAC------GCG---GGCGCTGCTGGCAGCGCGGCT---AAA------GTA---GCCTCACCCGCTGTC---GCT---TCA---GCA---TTC---AAC---TACATG---CGACTCATTGTGCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFLILKA---VGAAVGT-GS------------FLR-LLVGTLVMLIFGYLGE---A------E--L-----------M----------------------NV------TLA-FWIGMAGWGVIIYEI-----Y--A-GAAGSAA-K--V-ASPAV-A-S-A-F-N-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928661 [unk-Proteo1-b] PRGD_OTU046_0a811b22b3566b26d40635b9398cd7be gb|KJ928661| PRGD_OTU046_0a811b22b3566b26d40635b9398cd7be, putative proteorhodopsin gene, partial cds. PRGD_OTU046_0a811b22b3566b26d40635b9398cd7be, putative proteorhodopsin gene, partial cds. KJ928661 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683) TTGATAACCGTGCCGTTATTGATGATCGAATTCTTCCTGATACTCAAAGCGGTTGGTGCCGCGGTCGGTACAGGTTCATTCTTACGCCTTCTTGTTGGCACATTGGTTATGCTTATCTTTGGCTACCTTGGAGAGGCGGAGTTGATGAACGTCACCCTCGCATTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATTTACGCAGGCGCTGCTGGCAGCGCGGCTAAAGTAGCCTCACCCGCTGTCGCGTCAGCATTCAACTATATGAGACTCATTGTCCTTGTA LITVPLLMIEFFLILKAVGAAVGTGSFLRLLVGTLVMLIFGYLGEAELMNVTLAFWIGMAGWGVIIYEIYAGAAGSAAKVASPAVASAFNYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACCGTGCCGTTATTGATGATCGAATTCTTCCTGATACTCAAAGCG---------GTTGGTGCCGCGGTCGGTACA---GGTTCA------------------------------------TTCTTACGC---CTTCTTGTTGGCACATTGGTTATGCTTATCTTTGGCTACCTTGGAGAG---------GCG------------------GAG------TTG---------------------------------ATG------------------------------------------------------------------AACGTC------------------ACCCTCGCA---TTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATT---------------TAC------GCA---GGCGCTGCTGGCAGCGCGGCT---AAA------GTA---GCCTCACCCGCTGTC---GCG---TCA---GCA---TTC---AAC---TATATG---AGACTCATTGTCCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFLILKA---VGAAVGT-GS------------FLR-LLVGTLVMLIFGYLGE---A------E--L-----------M----------------------NV------TLA-FWIGMAGWGVIIYEI-----Y--A-GAAGSAA-K--V-ASPAV-A-S-A-F-N-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928677 [unk-Proteo1-b] PRGD_OTU046_d9b616d65079c52bdbf82c69505539ba gb|KJ928677| PRGD_OTU046_d9b616d65079c52bdbf82c69505539ba, putative proteorhodopsin gene, partial cds. PRGD_OTU046_d9b616d65079c52bdbf82c69505539ba, putative proteorhodopsin gene, partial cds. KJ928677 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Pacific side (69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) TTGATAACAGTGCCGTTATTGATGATCGAATTCTTCCTGATACTCAAAGCGGTTGGTGCCGCGGTCGGTACAGGTTCATTCTTACGCCTTCTTGTTGGCACATTGGTTATGCTTATCTTTGGCTACCTTGGAGAGGCGGAGTTGATGAACGTCACCCTCGCATTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATTTACGCGGGCGCTGCTGGCAGCGCGGCTAAAGTAGCCTCACCCGCAGTCGCGTCAGCATTCAACTATATGAGACTCATTGTGCTTGTA LITVPLLMIEFFLILKAVGAAVGTGSFLRLLVGTLVMLIFGYLGEAELMNVTLAFWIGMAGWGVIIYEIYAGAAGSAAKVASPAVASAFNYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACAGTGCCGTTATTGATGATCGAATTCTTCCTGATACTCAAAGCG---------GTTGGTGCCGCGGTCGGTACA---GGTTCA------------------------------------TTCTTACGC---CTTCTTGTTGGCACATTGGTTATGCTTATCTTTGGCTACCTTGGAGAG---------GCG------------------GAG------TTG---------------------------------ATG------------------------------------------------------------------AACGTC------------------ACCCTCGCA---TTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATT---------------TAC------GCG---GGCGCTGCTGGCAGCGCGGCT---AAA------GTA---GCCTCACCCGCAGTC---GCG---TCA---GCA---TTC---AAC---TATATG---AGACTCATTGTGCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFLILKA---VGAAVGT-GS------------FLR-LLVGTLVMLIFGYLGE---A------E--L-----------M----------------------NV------TLA-FWIGMAGWGVIIYEI-----Y--A-GAAGSAA-K--V-ASPAV-A-S-A-F-N-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928672 [unk-Proteo1-b] PRGD_OTU046_c41c148f147050576401a9fba5f9f779 gb|KJ928672| PRGD_OTU046_c41c148f147050576401a9fba5f9f779, putative proteorhodopsin gene, partial cds. PRGD_OTU046_c41c148f147050576401a9fba5f9f779, putative proteorhodopsin gene, partial cds. KJ928672 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 01-juil-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATAACAGTGCCGTTATTGATGATCGAATTCTTCCTGATACTCAAAGCGGTTGGTGCCGCGGTCGGTACAGGTTCATTCTTACGCCTTCTTGTTGGCACATTGGTTATGCTTATCTTTGGCTACCTTGGAGAGGCGGAGTTGATGAACGTCACCCTCGCATTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATTTACGCGGGCGCTGCTGGCAGCGCGGCTAAAGTTGCCTCACCAGCTGTGGCGTCAGCATTCAACTACATGAGACTCATTGTGCTTGTA LITVPLLMIEFFLILKAVGAAVGTGSFLRLLVGTLVMLIFGYLGEAELMNVTLAFWIGMAGWGVIIYEIYAGAAGSAAKVASPAVASAFNYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACAGTGCCGTTATTGATGATCGAATTCTTCCTGATACTCAAAGCG---------GTTGGTGCCGCGGTCGGTACA---GGTTCA------------------------------------TTCTTACGC---CTTCTTGTTGGCACATTGGTTATGCTTATCTTTGGCTACCTTGGAGAG---------GCG------------------GAG------TTG---------------------------------ATG------------------------------------------------------------------AACGTC------------------ACCCTCGCA---TTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATT---------------TAC------GCG---GGCGCTGCTGGCAGCGCGGCT---AAA------GTT---GCCTCACCAGCTGTG---GCG---TCA---GCA---TTC---AAC---TACATG---AGACTCATTGTGCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFLILKA---VGAAVGT-GS------------FLR-LLVGTLVMLIFGYLGE---A------E--L-----------M----------------------NV------TLA-FWIGMAGWGVIIYEI-----Y--A-GAAGSAA-K--V-ASPAV-A-S-A-F-N-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928679 [unk-Proteo1-b] PRGD_OTU046_e875edb31b072ee7917470717960e27f gb|KJ928679| PRGD_OTU046_e875edb31b072ee7917470717960e27f, putative proteorhodopsin gene, partial cds. PRGD_OTU046_e875edb31b072ee7917470717960e27f, putative proteorhodopsin gene, partial cds. KJ928679 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 01-juil-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683) TTGATAACAGTGCCGTTATTGATGATCGAATTCTTCCTGATACTCAAAGCGGTTGGTGCCGCGGTCGGTACAGGTTCATTCTTACGCCTTCTTGTTGGCACATTGGTTATGCTTATCTTTGGCTACCTTGGAGAGGCGGAGTTGATGAACGTCACCCTCGCATTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATTTTTGCGGGCGCTGCTGGCAGCGCGGCTAAAGTTGCCTCACCAGCTGTGGCGTCAGCATTCAACTACATGAGACTCATTGTGCTTGTA LITVPLLMIEFFLILKAVGAAVGTGSFLRLLVGTLVMLIFGYLGEAELMNVTLAFWIGMAGWGVIIYEIFAGAAGSAAKVASPAVASAFNYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACAGTGCCGTTATTGATGATCGAATTCTTCCTGATACTCAAAGCG---------GTTGGTGCCGCGGTCGGTACA---GGTTCA------------------------------------TTCTTACGC---CTTCTTGTTGGCACATTGGTTATGCTTATCTTTGGCTACCTTGGAGAG---------GCG------------------GAG------TTG---------------------------------ATG------------------------------------------------------------------AACGTC------------------ACCCTCGCA---TTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATT---------------TTT------GCG---GGCGCTGCTGGCAGCGCGGCT---AAA------GTT---GCCTCACCAGCTGTG---GCG---TCA---GCA---TTC---AAC---TACATG---AGACTCATTGTGCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFLILKA---VGAAVGT-GS------------FLR-LLVGTLVMLIFGYLGE---A------E--L-----------M----------------------NV------TLA-FWIGMAGWGVIIYEI-----F--A-GAAGSAA-K--V-ASPAV-A-S-A-F-N-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928664 [unk-Proteo1-b] PRGD_OTU046_4065e49d378a2004ad3f44e81329ca7a gb|KJ928664| PRGD_OTU046_4065e49d378a2004ad3f44e81329ca7a, putative proteorhodopsin gene, partial cds. PRGD_OTU046_4065e49d378a2004ad3f44e81329ca7a, putative proteorhodopsin gene, partial cds. KJ928664 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 01-juil-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATAACCGTACCGTTATTAATGATCGAATTCTTCCTGATACTCAAAGCGGTTGGTGCCGCGGTAGGTACAGGTTCATTCTTACGTCTTCTGGTTGGCACGTTGGTCATGCTTATTTTCGGCTACCTTGGAGAGGCGGAGTTGATGCCCGTCACCCTCGCATTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATTTTTGCGGGCGCTGCTGGCAGCGCGGCTAAAGTTGCCTCACCAGCTGTGGCGTCAGCATTCAACTACATGAGACTCATTGTGCTTGTA LITVPLLMIEFFLILKAVGAAVGTGSFLRLLVGTLVMLIFGYLGEAELMPVTLAFWIGMAGWGVIIYEIFAGAAGSAAKVASPAVASAFNYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACCGTACCGTTATTAATGATCGAATTCTTCCTGATACTCAAAGCG---------GTTGGTGCCGCGGTAGGTACA---GGTTCA------------------------------------TTCTTACGT---CTTCTGGTTGGCACGTTGGTCATGCTTATTTTCGGCTACCTTGGAGAG---------GCG------------------GAG------TTG---------------------------------ATG------------------------------------------------------------------CCCGTC------------------ACCCTCGCA---TTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATT---------------TTT------GCG---GGCGCTGCTGGCAGCGCGGCT------------AAAGTTGCCTCACCAGCTGTG---GCG---TCA---GCA---TTC---AAC---TACATG---AGACTCATTGTGCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFLILKA---VGAAVGT-GS------------FLR-LLVGTLVMLIFGYLGE---A------E--L-----------M----------------------PV------TLA-FWIGMAGWGVIIYEI-----F--A-GAAGSAA----KVASPAV-A-S-A-F-N-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928676 [unk-Proteo1-b] PRGD_OTU046_d1488c3e104cf97dea0e832aa07c1c75 gb|KJ928676| PRGD_OTU046_d1488c3e104cf97dea0e832aa07c1c75, putative proteorhodopsin gene, partial cds. PRGD_OTU046_d1488c3e104cf97dea0e832aa07c1c75, putative proteorhodopsin gene, partial cds. KJ928676 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 01-juil-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATAACCGTACCGTTATTAATGATCGAATTCTTCCTGATACTCAAAGCGGTTGGTGCCGCGGTAGGTACAGGTTCATTCTTACGTCTTTTGGTTGGCACGTTGGTCATGCTTATTTTCGGCTACCTTGGAGAGGCGGATTTGATGCCCGTCACCCTCGCATTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATTTTTGCGGGCGCTGCTGGCAGCGCGGCTAAAGTTGCCTCACCAGCTGTGGCGTCAGCATTCAACTACATGAGACTCATTGTGCTTGTA LITVPLLMIEFFLILKAVGAAVGTGSFLRLLVGTLVMLIFGYLGEADLMPVTLAFWIGMAGWGVIIYEIFAGAAGSAAKVASPAVASAFNYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACCGTACCGTTATTAATGATCGAATTCTTCCTGATACTCAAAGCG---------GTTGGTGCCGCGGTAGGTACA---GGTTCA------------------------------------TTCTTACGT---CTTTTGGTTGGCACGTTGGTCATGCTTATTTTCGGCTACCTTGGAGAG---------GCG------------------GAT------TTG---------------------------------ATG------------------------------------------------------------------CCCGTC------------------ACCCTCGCA---TTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATT---------------TTT------GCG---GGCGCTGCTGGCAGCGCGGCT------------AAAGTTGCCTCACCAGCTGTG---GCG---TCA---GCA---TTC---AAC---TACATG---AGACTCATTGTGCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFLILKA---VGAAVGT-GS------------FLR-LLVGTLVMLIFGYLGE---A------D--L-----------M----------------------PV------TLA-FWIGMAGWGVIIYEI-----F--A-GAAGSAA----KVASPAV-A-S-A-F-N-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928680 [unk-Proteo1-b] PRGD_OTU046_eb9a8f45fe27d2dc95227839c89e4f42 gb|KJ928680| PRGD_OTU046_eb9a8f45fe27d2dc95227839c89e4f42, putative proteorhodopsin gene, partial cds. PRGD_OTU046_eb9a8f45fe27d2dc95227839c89e4f42, putative proteorhodopsin gene, partial cds. KJ928680 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 01-juil-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) TTAATAACCGTACCGTTATTAATGATCGAATTCTTCCTGATACTCAAAGCGGTTGGTGCCGCGGTAGGTACAGGTTCATTCTTACGTCTTTTGGTTGGCACGTTGGTCATGCTTATTTTCGGCTACCTTGGAGAGGCGGAGTTGATGAACGTCACCCTCGCATTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATTTTTGCGGGCGCTGCTGGCAGCGCGGCTAAAGTTGCCTCACCAGCTGTGGCGTCAGCATTCAACTACATGAGACTCATTGTGCTTGTA LITVPLLMIEFFLILKAVGAAVGTGSFLRLLVGTLVMLIFGYLGEAELMNVTLAFWIGMAGWGVIIYEIFAGAAGSAAKVASPAVASAFNYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACCGTACCGTTATTAATGATCGAATTCTTCCTGATACTCAAAGCG---------GTTGGTGCCGCGGTAGGTACA---GGTTCA------------------------------------TTCTTACGT---CTTTTGGTTGGCACGTTGGTCATGCTTATTTTCGGCTACCTTGGAGAG---------GCG------------------GAG------TTG---------------------------------ATG------------------------------------------------------------------AACGTC------------------ACCCTCGCA---TTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATT---------------TTT------GCG---GGCGCTGCTGGCAGCGCGGCT---AAA------GTT---GCCTCACCAGCTGTG---GCG---TCA---GCA---TTC---AAC---TACATG---AGACTCATTGTGCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFLILKA---VGAAVGT-GS------------FLR-LLVGTLVMLIFGYLGE---A------E--L-----------M----------------------NV------TLA-FWIGMAGWGVIIYEI-----F--A-GAAGSAA-K--V-ASPAV-A-S-A-F-N-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928665 [unk-Proteo1-b] PRGD_OTU046_4422f0b2f10efce4fecf8914ca900620 gb|KJ928665| PRGD_OTU046_4422f0b2f10efce4fecf8914ca900620, putative proteorhodopsin gene, partial cds. PRGD_OTU046_4422f0b2f10efce4fecf8914ca900620, putative proteorhodopsin gene, partial cds. KJ928665 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 01-juil-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683) TTAATAACCGTACCGTTATTAATGATCGAATTCTTCCTGATACTCAAAGCGGTTGGTGCCGCGGTAGGTACAGGTTCATTCTTACGTCTTTTGGTTGGCACGTTGGTCATGCTTATTTTCGGCTACCTTGGAGAGGCGGAGTTGATGAACGTCACCCTCGCATTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATTTACGCGGGCGCTGCTGGCAGCGCGGCTAAAGTAGCCTCACCCGCTGTCGCATCAGCATTCAACTATATGAGACTCATTGTGCTTGTA LITVPLLMIEFFLILKAVGAAVGTGSFLRLLVGTLVMLIFGYLGEAELMNVTLAFWIGMAGWGVIIYEIYAGAAGSAAKVASPAVASAFNYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACCGTACCGTTATTAATGATCGAATTCTTCCTGATACTCAAAGCG---------GTTGGTGCCGCGGTAGGTACA---GGTTCA------------------------------------TTCTTACGT---CTTTTGGTTGGCACGTTGGTCATGCTTATTTTCGGCTACCTTGGAGAG---------GCG------------------GAG------TTG---------------------------------ATG------------------------------------------------------------------AACGTC------------------ACCCTCGCA---TTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATT---------------TAC------GCG---GGCGCTGCTGGCAGCGCGGCT---AAA------GTA---GCCTCACCCGCTGTC---GCA---TCA---GCA---TTC---AAC---TATATG---AGACTCATTGTGCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFLILKA---VGAAVGT-GS------------FLR-LLVGTLVMLIFGYLGE---A------E--L-----------M----------------------NV------TLA-FWIGMAGWGVIIYEI-----Y--A-GAAGSAA-K--V-ASPAV-A-S-A-F-N-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928666 [unk-Proteo1-b] PRGD_OTU046_6b6562d040a491476cafb417c16d412d gb|KJ928666| PRGD_OTU046_6b6562d040a491476cafb417c16d412d, putative proteorhodopsin gene, partial cds. PRGD_OTU046_6b6562d040a491476cafb417c16d412d, putative proteorhodopsin gene, partial cds. KJ928666 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 01-juil-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATAACCGTACCGTTATTAATGATCGAATTCTTCCTGATACTCAAAGCGGTTGGTGCCGCCGTAGGTACAGGTTCATTCTTACGCCTTTTGGTTGGCACGTTGGTCATGCTTATTTTCGGCTACCTTGGAGAGGCGGAGCTGATGAACGTCACCCTCGCATTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATTTACGCGGGCGCTGCTGGCAGCGCGGCTAAAGTAGCCTCACCCGCTGTCGCATCAGCATTTAACTATATGAGACTCATTGTGCTTGTA LITVPLLMIEFFLILKAVGAAVGTGSFLRLLVGTLVMLIFGYLGEAELMNVTLAFWIGMAGWGVIIYEIYAGAAGSAAKVASPAVASAFNYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACCGTACCGTTATTAATGATCGAATTCTTCCTGATACTCAAAGCG---------GTTGGTGCCGCCGTAGGTACA---GGTTCA------------------------------------TTCTTACGC---CTTTTGGTTGGCACGTTGGTCATGCTTATTTTCGGCTACCTTGGAGAG---------GCG------------------GAG------CTG---------------------------------ATG------------------------------------------------------------------AACGTC------------------ACCCTCGCA---TTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATT---------------TAC------GCG---GGCGCTGCTGGCAGCGCGGCT---AAA------GTA---GCCTCACCCGCTGTC---GCA---TCA---GCA---TTT---AAC---TATATG---AGACTCATTGTGCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFLILKA---VGAAVGT-GS------------FLR-LLVGTLVMLIFGYLGE---A------E--L-----------M----------------------NV------TLA-FWIGMAGWGVIIYEI-----Y--A-GAAGSAA-K--V-ASPAV-A-S-A-F-N-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928678 [unk-Proteo1-b] PRGD_OTU046_e39ffefb1236f6e86ac4046077ab350e gb|KJ928678| PRGD_OTU046_e39ffefb1236f6e86ac4046077ab350e, putative proteorhodopsin gene, partial cds. PRGD_OTU046_e39ffefb1236f6e86ac4046077ab350e, putative proteorhodopsin gene, partial cds. KJ928678 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 01-juil-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATAACCGTACCGTTATTAATGATCGAATTCTTCCTGATACTCAAAGCGGTTGGTGCCGCGGTAGGTACAGGTTCATTCTTACGTCTTTTGGTTGGCACGTTGGTCATGCTTATTTTCGGCTACCTTGGAGAGGCGGAGTTGATGAACGTCACCCTCGCATTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATTTTTGCGGGCGCTGCTGGCAGCGCGGCTAAAGTAGCCTCACCCGCAGTCGCGTCAGCATTCAACTATATGAGACTCATTGTGCTTGTA LITVPLLMIEFFLILKAVGAAVGTGSFLRLLVGTLVMLIFGYLGEAELMNVTLAFWIGMAGWGVIIYEIFAGAAGSAAKVASPAVASAFNYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACCGTACCGTTATTAATGATCGAATTCTTCCTGATACTCAAAGCG---------GTTGGTGCCGCGGTAGGTACA---GGTTCA------------------------------------TTCTTACGT---CTTTTGGTTGGCACGTTGGTCATGCTTATTTTCGGCTACCTTGGAGAG---------GCG------------------GAG------TTG---------------------------------ATG------------------------------------------------------------------AACGTC------------------ACCCTCGCA---TTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATT---------------TTT------GCG---GGCGCTGCTGGCAGCGCGGCT---AAA------GTA---GCCTCACCCGCAGTC---GCG---TCA---GCA---TTC---AAC---TATATG---AGACTCATTGTGCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFLILKA---VGAAVGT-GS------------FLR-LLVGTLVMLIFGYLGE---A------E--L-----------M----------------------NV------TLA-FWIGMAGWGVIIYEI-----F--A-GAAGSAA-K--V-ASPAV-A-S-A-F-N-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928667 [unk-Proteo1-b] PRGD_OTU046_79bb16626ade3dea08ed978f51d69b88 gb|KJ928667| PRGD_OTU046_79bb16626ade3dea08ed978f51d69b88, putative proteorhodopsin gene, partial cds. PRGD_OTU046_79bb16626ade3dea08ed978f51d69b88, putative proteorhodopsin gene, partial cds. KJ928667 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 01-juil-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683) TTAATAACCGTACCGTTATTAATGATCGAATTCTTCCTGATACTCAAAGCGGTTGGTGCCGCCGTAGGTACAGGTTCATTCTTACGCCTTTTGGTTGGCACGTTGGTCATGCTTATTTTCGGCTACCTTGGAGAGGCGGAGCTGATGAACGTCACCCTCGCATTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATTTTTGCGGGCGCTGCTGGCAGCGCGGCTAAAGTAGCCTCACCAGCTGTGGCGTCAGCATTCAACTACATGAGACTCATTGTGCTTGTA LITVPLLMIEFFLILKAVGAAVGTGSFLRLLVGTLVMLIFGYLGEAELMNVTLAFWIGMAGWGVIIYEIFAGAAGSAAKVASPAVASAFNYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACCGTACCGTTATTAATGATCGAATTCTTCCTGATACTCAAAGCG---------GTTGGTGCCGCCGTAGGTACA---GGTTCA------------------------------------TTCTTACGC---CTTTTGGTTGGCACGTTGGTCATGCTTATTTTCGGCTACCTTGGAGAG---------GCG------------------GAG------CTG---------------------------------ATG------------------------------------------------------------------AACGTC------------------ACCCTCGCA---TTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATT---------------TTT------GCG---GGCGCTGCTGGCAGCGCGGCT---AAA------GTA---GCCTCACCAGCTGTG---GCG---TCA---GCA---TTC---AAC---TACATG---AGACTCATTGTGCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFLILKA---VGAAVGT-GS------------FLR-LLVGTLVMLIFGYLGE---A------E--L-----------M----------------------NV------TLA-FWIGMAGWGVIIYEI-----F--A-GAAGSAA-K--V-ASPAV-A-S-A-F-N-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928673 [unk-Proteo1-b] PRGD_OTU046_cb332fe83c68452e50979f6d44ed8522 gb|KJ928673| PRGD_OTU046_cb332fe83c68452e50979f6d44ed8522, putative proteorhodopsin gene, partial cds. PRGD_OTU046_cb332fe83c68452e50979f6d44ed8522, putative proteorhodopsin gene, partial cds. KJ928673 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683) TTAATAACCGTACCGTTATTAATGATCGAATTCTTCCTGATACTCAAAGCGGTTGGTGCCGCCGTAGGTACAGGTTCATTCTTACGCCTTTTGGTTGGCACGTTGGTCATGCTTATTTTCGGCTACCTTGGAGAGGCGGAGTTGATGAACGTCACCCTCGCATTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATTTTTGCGGGCGCTGCTGGCAGCGCGGCTAAGGTAGCCTCTCCAGCTGTGGCGTCAGCATTCAACTACATGAGACTCATTGTGCTTGTA LITVPLLMIEFFLILKAVGAAVGTGSFLRLLVGTLVMLIFGYLGEAELMNVTLAFWIGMAGWGVIIYEIFAGAAGSAAKVASPAVASAFNYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACCGTACCGTTATTAATGATCGAATTCTTCCTGATACTCAAAGCG---------GTTGGTGCCGCCGTAGGTACA---GGTTCA------------------------------------TTCTTACGC---CTTTTGGTTGGCACGTTGGTCATGCTTATTTTCGGCTACCTTGGAGAG---------GCG------------------GAG------TTG---------------------------------ATG------------------------------------------------------------------AACGTC------------------ACCCTCGCA---TTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATT---------------TTT------GCG---GGCGCTGCTGGCAGCGCGGCT---AAG------GTA---GCCTCTCCAGCTGTG---GCG---TCA---GCA---TTC---AAC---TACATG---AGACTCATTGTGCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFLILKA---VGAAVGT-GS------------FLR-LLVGTLVMLIFGYLGE---A------E--L-----------M----------------------NV------TLA-FWIGMAGWGVIIYEI-----F--A-GAAGSAA-K--V-ASPAV-A-S-A-F-N-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928675 [unk-Proteo1-b] PRGD_OTU046_d0ebb74b17995846f79f8bf32adbc3c3 gb|KJ928675| PRGD_OTU046_d0ebb74b17995846f79f8bf32adbc3c3, putative proteorhodopsin gene, partial cds. PRGD_OTU046_d0ebb74b17995846f79f8bf32adbc3c3, putative proteorhodopsin gene, partial cds. KJ928675 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) TTAATAACCGTGCCGTTATTAATGATTGAATTCTTCCTGATACTCAAAGCGGTTGGTGCCGCGGTAGGTACAGGTTCATTCTTACGCCTTCTGGTTGGCACGTTGGTCATGCTTATTTTCGGCTACCTTGGAGAGGCGGAGTTGATGAACGTCACCCTCGCATTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATTTTTGCGGGCGCTGCTGGCAGCGCGGCTAAAGTTGCCTCACCAGCTGTGGCGTCAGCATTCAACTACATGAGACTCATTGTGCTTGTA LITVPLLMIEFFLILKAVGAAVGTGSFLRLLVGTLVMLIFGYLGEAELMNVTLAFWIGMAGWGVIIYEIFAGAAGSAAKVASPAVASAFNYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACCGTGCCGTTATTAATGATTGAATTCTTCCTGATACTCAAAGCG---------GTTGGTGCCGCGGTAGGTACA---GGTTCA------------------------------------TTCTTACGC---CTTCTGGTTGGCACGTTGGTCATGCTTATTTTCGGCTACCTTGGAGAG---------GCG------------------GAG------TTG---------------------------------ATG------------------------------------------------------------------AACGTC------------------ACCCTCGCA---TTCTGGATTGGTATGGCTGGATGGGGCGTTATCATCTACGAGATT---------------TTT------GCG---GGCGCTGCTGGCAGCGCGGCT---AAA------GTT---GCCTCACCAGCTGTG---GCG---TCA---GCA---TTC---AAC---TACATG---AGACTCATTGTGCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFLILKA---VGAAVGT-GS------------FLR-LLVGTLVMLIFGYLGE---A------E--L-----------M----------------------NV------TLA-FWIGMAGWGVIIYEI-----F--A-GAAGSAA-K--V-ASPAV-A-S-A-F-N-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928451 [unk-Proteo1-b] PRGD_OTU037_1832509c51b42bd4f508948b37a1af4a gb|KJ928451| PRGD_OTU037_1832509c51b42bd4f508948b37a1af4a, putative proteorhodopsin gene, partial cds. PRGD_OTU037_1832509c51b42bd4f508948b37a1af4a, putative proteorhodopsin gene, partial cds. KJ928451 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097), Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Indian Ocean (-33.28, 45.35) TTAATCACTGTGCCACTGTTGATGATCGAGTTTTACATTATTCTAAAAGCCGTTGGTGCTTCGGTGGGTAGTGGATCTTTTGTTCGACTTCTGGTTGGAACCTTGGTGATGTTGGTGTTCGGTTACTTAGGTGAAGCGGGCATCATGGGCACAACCCCCGCGTTTATCCTCGGAATGGTCGGTTGGGCAGTTATTATCTACGAAATCTTCGCAGGTGAGGCTGGTAAGGCAGCCGCTGCAAATGAGAGCGTTAAGGCTGCGTTTGGCTACATGCGATTAATCGTTCTTGTA LITVPLLMIEFYIILKAVGASVGSGSFVRLLVGTLVMLVFGYLGEAGIMGTTPAFILGMVGWAVIIYEIFAGEAGKAAAANESVKAAFGYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCACTGTTGATGATCGAGTTTTACATTATTCTAAAAGCC---------GTTGGTGCTTCGGTGGGTAGT---GGATCT------------------------------------TTTGTTCGA---CTTCTGGTTGGAACCTTGGTGATGTTGGTGTTCGGTTACTTAGGTGAA---------GCG------------------GGC------ATC---------------------------------ATG------------------------------------------------------------------GGCACA------------------ACCCCCGCG---TTTATCCTCGGAATGGTCGGTTGGGCAGTTATTATCTACGAAATC---------------TTC------GCA---GGTGAGGCTGGTAAGGCAGCC------------GCT---GCAAATGAGAGCGTT---AAG---GCT---GCG---TTT---GGC---TACATG---CGATTAATCGTTCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYIILKA---VGASVGS-GS------------FVR-LLVGTLVMLVFGYLGE---A------G--I-----------M----------------------GT------TPA-FILGMVGWAVIIYEI-----F--A-GEAGKAA----A-ANESV-K-A-A-F-G-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928463 [unk-Proteo1-b] PRGD_OTU037_7fe342617aad8686ad6f5ad89538502e gb|KJ928463| PRGD_OTU037_7fe342617aad8686ad6f5ad89538502e, putative proteorhodopsin gene, partial cds. PRGD_OTU037_7fe342617aad8686ad6f5ad89538502e, putative proteorhodopsin gene, partial cds. KJ928463 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATCACTGTGCCGCTGTTGATGATCGAGTTTTACATTATTCTAAAAGCCGTTGGTGCCTCGGTGGGTAGTGGATCTTTTGTTCGACTTCTGGTTGGCACCTTGGTGATGTTGGTGTTCGGTTACTTAGGTGAAGCGGGCATCATGGGCACAACCCTCGCGTTTATCCTCGGAATGGTCGGTTGGGCAGTTATTATCTACGAAATCTTCGCAGGTGAGGCTGGTAAGGCAGCCGCTGCAAATGAGAGCGTTAAGGCTGCGTTTGGCTACATGCGATTAATCGTTCTTGTA LITVPLLMIEFYIILKAVGASVGSGSFVRLLVGTLVMLVFGYLGEAGIMGTTLAFILGMVGWAVIIYEIFAGEAGKAAAANESVKAAFGYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCGCTGTTGATGATCGAGTTTTACATTATTCTAAAAGCC---------GTTGGTGCCTCGGTGGGTAGT---GGATCT------------------------------------TTTGTTCGA---CTTCTGGTTGGCACCTTGGTGATGTTGGTGTTCGGTTACTTAGGTGAA---------GCG------------------GGC------ATC---------------------------------ATG------------------------------------------------------------------GGCACA------------------ACCCTCGCG---TTTATCCTCGGAATGGTCGGTTGGGCAGTTATTATCTACGAAATC---------------TTC------GCA---GGTGAGGCTGGTAAGGCAGCC------------GCT---GCAAATGAGAGCGTT---AAG---GCT---GCG---TTT---GGC---TACATG---CGATTAATCGTTCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYIILKA---VGASVGS-GS------------FVR-LLVGTLVMLVFGYLGE---A------G--I-----------M----------------------GT------TLA-FILGMVGWAVIIYEI-----F--A-GEAGKAA----A-ANESV-K-A-A-F-G-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928468 [unk-Proteo1-b] PRGD_OTU037_c3735509cc65d0b11f5e8d619f36a715 gb|KJ928468| PRGD_OTU037_c3735509cc65d0b11f5e8d619f36a715, putative proteorhodopsin gene, partial cds. PRGD_OTU037_c3735509cc65d0b11f5e8d619f36a715, putative proteorhodopsin gene, partial cds. KJ928468 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACTGTGCCACTGTTGATGATCGAGTTTTACATTATTCTAAAAGCCGTTGGTGCTTCGGTGGGTAGTGGATCTTTTGTTCGACTTCTGGTTGGAACCTTGGTGATGTTGGTGTTCGGTTACTTAGGCGAAGCGGGCATCATGGGCACAACCCTCGCGTTTATCCTCGGAATGGTCGGTTGGGCAGTTATTATCTACGAAATCTTCGCAGGTGAGGCTGGTAAGGCAGCCGCTGCAAATGAGAGTGTTAAGGCTGCGTTTGGCTACATGCGATTAATCGTTCTTGTA LITVPLLMIEFYIILKAVGASVGSGSFVRLLVGTLVMLVFGYLGEAGIMGTTLAFILGMVGWAVIIYEIFAGEAGKAAAANESVKAAFGYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCACTGTTGATGATCGAGTTTTACATTATTCTAAAAGCC---------GTTGGTGCTTCGGTGGGTAGT---GGATCT------------------------------------TTTGTTCGA---CTTCTGGTTGGAACCTTGGTGATGTTGGTGTTCGGTTACTTAGGCGAA---------GCG------------------GGC------ATC---------------------------------ATG------------------------------------------------------------------GGCACA------------------ACCCTCGCG---TTTATCCTCGGAATGGTCGGTTGGGCAGTTATTATCTACGAAATC---------------TTC------GCA---GGTGAGGCTGGTAAGGCAGCC------------GCT---GCAAATGAGAGTGTT---AAG---GCT---GCG---TTT---GGC---TACATG---CGATTAATCGTTCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYIILKA---VGASVGS-GS------------FVR-LLVGTLVMLVFGYLGE---A------G--I-----------M----------------------GT------TLA-FILGMVGWAVIIYEI-----F--A-GEAGKAA----A-ANESV-K-A-A-F-G-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928449 [unk-Proteo1-b] PRGD_OTU037_0ff85a3840e8f299b2de461c1271664d gb|KJ928449| PRGD_OTU037_0ff85a3840e8f299b2de461c1271664d, putative proteorhodopsin gene, partial cds. PRGD_OTU037_0ff85a3840e8f299b2de461c1271664d, putative proteorhodopsin gene, partial cds. KJ928449 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) TTGATCACTGTGCCACTGTTGATGATCGAGTTTTACATTATTCTAAAAGCCGTTGGTGCTTCGGTGGGTAGTGGATCTTTTGTTCGACTTCTGGTTGGAACCTTGGTGATGTTGGTGTTCGGTTACTTAGGCGAAGCGGGCATCATGGGCACAACCCTCGCGTTTATCCTCGGAATGGTCGGTTGGGCAGTTATTATCTACGAAATCTTCGCAGGTGAGGCTGGTAAGGCAGCCGCAGCAAATGAGAGTGTTAAGGCTGCGTTTGGCTACATGCGATTAATCGTTCTTGTA LITVPLLMIEFYIILKAVGASVGSGSFVRLLVGTLVMLVFGYLGEAGIMGTTLAFILGMVGWAVIIYEIFAGEAGKAAAANESVKAAFGYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTGCCACTGTTGATGATCGAGTTTTACATTATTCTAAAAGCC---------GTTGGTGCTTCGGTGGGTAGT---GGATCT------------------------------------TTTGTTCGA---CTTCTGGTTGGAACCTTGGTGATGTTGGTGTTCGGTTACTTAGGCGAA---------GCG------------------GGC------ATC---------------------------------ATG------------------------------------------------------------------GGCACA------------------ACCCTCGCG---TTTATCCTCGGAATGGTCGGTTGGGCAGTTATTATCTACGAAATC---------------TTC------GCA---GGTGAGGCTGGTAAGGCAGCC------------GCA---GCAAATGAGAGTGTT---AAG---GCT---GCG---TTT---GGC---TACATG---CGATTAATCGTTCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYIILKA---VGASVGS-GS------------FVR-LLVGTLVMLVFGYLGE---A------G--I-----------M----------------------GT------TLA-FILGMVGWAVIIYEI-----F--A-GEAGKAA----A-ANESV-K-A-A-F-G-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928455 [unk-Proteo1-b] PRGD_OTU037_32023f49572f13b028071774569de947 gb|KJ928455| PRGD_OTU037_32023f49572f13b028071774569de947, putative proteorhodopsin gene, partial cds. PRGD_OTU037_32023f49572f13b028071774569de947, putative proteorhodopsin gene, partial cds. KJ928455 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATCACTGTGCCACTGTTGATGATCGAGTTTTACATTATTCTAAAAGCCGTTGGTGCTTCGGTGGGTAGTGGATCTTTTGTTCGACTTCTGGTTGGAACCTTGGTCATGTTGGTGTTCGGTTACTTAGGCGAAGCGGGCATCATGGGCACAACCCTCGCATTTATCCTCGGAATGGTCGGTTGGGCAGTTATTATCTACGAAATCTTCGCAGGTGAGGCTGGCAAGGCGGCCGCTGCAAATGAGAGTGTTAAGGCTGCGTTTGGCTACATGCGTTTAATCGTTCTTGTG LITVPLLMIEFYIILKAVGASVGSGSFVRLLVGTLVMLVFGYLGEAGIMGTTLAFILGMVGWAVIIYEIFAGEAGKAAAANESVKAAFGYMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCACTGTTGATGATCGAGTTTTACATTATTCTAAAAGCC---------GTTGGTGCTTCGGTGGGTAGT---GGATCT------------------------------------TTTGTTCGA---CTTCTGGTTGGAACCTTGGTCATGTTGGTGTTCGGTTACTTAGGCGAA---------GCG------------------GGC------ATC---------------------------------ATG------------------------------------------------------------------GGCACA------------------ACCCTCGCA---TTTATCCTCGGAATGGTCGGTTGGGCAGTTATTATCTACGAAATC---------------TTC------GCA---GGTGAGGCTGGCAAGGCGGCC------------GCT---GCAAATGAGAGTGTT---AAG---GCT---GCG---TTT---GGC---TACATG---CGTTTAATCGTTCTTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYIILKA---VGASVGS-GS------------FVR-LLVGTLVMLVFGYLGE---A------G--I-----------M----------------------GT------TLA-FILGMVGWAVIIYEI-----F--A-GEAGKAA----A-ANESV-K-A-A-F-G-YM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ929259 [unk-Proteo1-b] PRGD_OTU094_bad936a3f538a362fb836b70964f2287 gb|KJ929259| PRGD_OTU094_bad936a3f538a362fb836b70964f2287, putative proteorhodopsin gene, partial cds. PRGD_OTU094_bad936a3f538a362fb836b70964f2287, putative proteorhodopsin gene, partial cds. KJ929259 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Indian Ocean (-33.28, 45.35) CTAATTACCGTACCTCTTCAAATGATCGAGTTCTGGTTGATTTTAGCAGCTGTGGGAGCAGCGGTAGGATCAGCATCTTTCTTGCGACTGCTTATCGGCACCTTGGTCATGCTTGTCTTCGGATTTATGGGAGAGGCAGGATACATGGATGCAACTATAGCATTCGTTATCGCGATGCTAGGTTGGGCTATTATCATCTATGAAATCTTCGCAGGAGAGGCGAGCAAAGCTGCTGGCTCATCAAACGAATCGGTTCAGGGTGCATTCAGTGCAATGAGGCTTATTGTCCTCGTT LITVPLQMIEFWLILAAVGAAVGSASFLRLLIGTLVMLVFGFMGEAGYMDATIAFVIAMLGWAIIIYEIFAGEASKAAGSSNESVQGAFSAMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACCGTACCTCTTCAAATGATCGAGTTCTGGTTGATTTTAGCAGCT---------GTGGGAGCAGCGGTAGGATCA---GCATCT------------------------------------TTCTTGCGA---CTGCTTATCGGCACCTTGGTCATGCTTGTCTTCGGATTTATGGGAGAG---------GCA------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------GATGCA------------------ACTATAGCA---TTCGTTATCGCGATGCTAGGTTGGGCTATTATCATCTATGAAATC---------------TTC------GCA---GGAGAGGCGAGCAAAGCT---GCTGGC------TCA---TCAAACGAATCGGTT---CAG---GGT---GCA---TTC---AGT---GCAATG---AGGCTTATTGTCCTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFWLILAA---VGAAVGS-AS------------FLR-LLIGTLVMLVFGFMGE---A------G--Y-----------M----------------------DA------TIA-FVIAMLGWAIIIYEI-----F--A-GEASKA-AG--S-SNESV-Q-G-A-F-S-AM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ929255 [unk-Proteo1-b] PRGD_OTU094_otuREP_4adcfc8456753be59be9bb74568e6303 gb|KJ929255| PRGD_OTU094_otuREP_4adcfc8456753be59be9bb74568e6303, putative proteorhodopsin gene, partial cds. PRGD_OTU094_otuREP_4adcfc8456753be59be9bb74568e6303, putative proteorhodopsin gene, partial cds. KJ929255 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Indian Ocean (-14.48, 113.45) TTAATTACTGTGCCTCTTCAAATGATCGAGTTCTGGTTGATTTTAGCAGCTGTTGGAGCAGCTGTAGGCTCATCGTCTTTCTTGCGACTGCTTATCGGCACCTTGGTTATGCTGGTCTTCGGATTCATGGGAGAGGCAGGATATATGGATGCAACGATAGCATTCGTTATCGCGATGGTAGGTTGGGCTATTATCATCTATGAAATCTTTGCGGGAGAAGCAAGCAAAGCTGCTGGCTCATCAAATGCATCGGTTCAGGGTGCATTCAGCGCAATGAGGCTTATTGTCCTTGTT LITVPLQMIEFWLILAAVGAAVGSSSFLRLLIGTLVMLVFGFMGEAGYMDATIAFVIAMVGWAIIIYEIFAGEASKAAGSSNASVQGAFSAMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCTCTTCAAATGATCGAGTTCTGGTTGATTTTAGCAGCT---------GTTGGAGCAGCTGTAGGCTCA---TCGTCT------------------------------------TTCTTGCGA---CTGCTTATCGGCACCTTGGTTATGCTGGTCTTCGGATTCATGGGAGAG---------GCA------------------GGA------TAT---------------------------------ATG------------------------------------------------------------------GATGCA------------------ACGATAGCA---TTCGTTATCGCGATGGTAGGTTGGGCTATTATCATCTATGAAATC---------------TTT------GCG---GGAGAAGCAAGCAAAGCT---GCTGGC------TCA---TCAAATGCATCGGTT---CAG---GGT---GCA---TTC---AGC---GCAATG---AGGCTTATTGTCCTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFWLILAA---VGAAVGS-SS------------FLR-LLIGTLVMLVFGFMGE---A------G--Y-----------M----------------------DA------TIA-FVIAMVGWAIIIYEI-----F--A-GEASKA-AG--S-SNASV-Q-G-A-F-S-AM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ929256 [unk-Proteo1-b] PRGD_OTU094_81d7a42874952e89498f189e4b7ddcbb gb|KJ929256| PRGD_OTU094_81d7a42874952e89498f189e4b7ddcbb, putative proteorhodopsin gene, partial cds. PRGD_OTU094_81d7a42874952e89498f189e4b7ddcbb, putative proteorhodopsin gene, partial cds. KJ929256 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACCGTGCCTCTTCAAATGATCGAGTTCTGGTTGATTTTAGCAGCTGTTGGAGCGGCAGTAGGCTCATCATCTTTCTTGCGACTACTTATCGGTACCTTGGTTATGCTGGTCTTCGGATTTATGGGAGAGGCAGGATACATGGATGCAACGATAGCATTCGTTATCGCAATGGTAGGTTGGGCTATTATCATCTACGAAATCTTTGCAGGAGAAGCAAGCAAAGCTGCTGGCTCATCAAATGCATCGGTTCAGGGTGCATTCAGTGCAATGAGGCTTATTGTCCTGGTT LITVPLQMIEFWLILAAVGAAVGSSSFLRLLIGTLVMLVFGFMGEAGYMDATIAFVIAMVGWAIIIYEIFAGEASKAAGSSNASVQGAFSAMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACCGTGCCTCTTCAAATGATCGAGTTCTGGTTGATTTTAGCAGCT---------GTTGGAGCGGCAGTAGGCTCA---TCATCT------------------------------------TTCTTGCGA---CTACTTATCGGTACCTTGGTTATGCTGGTCTTCGGATTTATGGGAGAG---------GCA------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------GATGCA------------------ACGATAGCA---TTCGTTATCGCAATGGTAGGTTGGGCTATTATCATCTACGAAATC---------------TTT------GCA---GGAGAAGCAAGCAAAGCT---GCTGGC------TCA---TCAAATGCATCGGTT---CAG---GGT---GCA---TTC---AGT---GCAATG---AGGCTTATTGTCCTGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFWLILAA---VGAAVGS-SS------------FLR-LLIGTLVMLVFGFMGE---A------G--Y-----------M----------------------DA------TIA-FVIAMVGWAIIIYEI-----F--A-GEASKA-AG--S-SNASV-Q-G-A-F-S-AM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ929258 [unk-Proteo1-b] PRGD_OTU094_b6480b71cac8c4f033ba497a584546f2 gb|KJ929258| PRGD_OTU094_b6480b71cac8c4f033ba497a584546f2, putative proteorhodopsin gene, partial cds. PRGD_OTU094_b6480b71cac8c4f033ba497a584546f2, putative proteorhodopsin gene, partial cds. KJ929258 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATTACTGTACCTCTCCAAATGATCGAGTTTTGGTTGATTCTAGCAGCTGTTGGAGCAGCGGTAGGCGGAGCATCATTCTTGCGCCTTCTTGTTGGTACCTTAGTAATGCTGGTCTTCGGATATTTGGGAGAGGCAGGTTACATGGATGCAACCATAGCCTTCGTTATCGCGATGATCGGTTGGGCCATTATCATCTACGAGATTTTTGCGGGAGAGGCGAGCAAAGCTGCTGGCTCATCAAACGCTTCTGTCCAAGGTGCGTTCAGCGCGATGAGACTTATTGTTCTAGTG LITVPLQMIEFWLILAAVGAAVGGASFLRLLVGTLVMLVFGYLGEAGYMDATIAFVIAMIGWAIIIYEIFAGEASKAAGSSNASVQGAFSAMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTACCTCTCCAAATGATCGAGTTTTGGTTGATTCTAGCAGCT---------GTTGGAGCAGCGGTAGGCGGA---GCATCA------------------------------------TTCTTGCGC---CTTCTTGTTGGTACCTTAGTAATGCTGGTCTTCGGATATTTGGGAGAG---------GCA------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GATGCA------------------ACCATAGCC---TTCGTTATCGCGATGATCGGTTGGGCCATTATCATCTACGAGATT---------------TTT------GCG---GGAGAGGCGAGCAAAGCT---GCTGGC------TCA---TCAAACGCTTCTGTC---CAA---GGT---GCG---TTC---AGC---GCGATG---AGACTTATTGTTCTAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFWLILAA---VGAAVGG-AS------------FLR-LLVGTLVMLVFGYLGE---A------G--Y-----------M----------------------DA------TIA-FVIAMIGWAIIIYEI-----F--A-GEASKA-AG--S-SNASV-Q-G-A-F-S-AM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ929261 [unk-Proteo1-b] PRGD_OTU094_db7bc9f846ebc450a5ca43ce0f946240 gb|KJ929261| PRGD_OTU094_db7bc9f846ebc450a5ca43ce0f946240, putative proteorhodopsin gene, partial cds. PRGD_OTU094_db7bc9f846ebc450a5ca43ce0f946240, putative proteorhodopsin gene, partial cds. KJ929261 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTAATTACAGTACCTCTCCAAATGATCGAGTTTTGGTTGATTCTAGCAGCTGTTGGAGCAGCGGTAGGCGGAGCATCATTCTTGCGCCTTCTTGTTGGTACCTTAGTAATGCTAGTCTTCGGATATTTGGGAGAGGCAGGTTACATGGATGCAACCATAGCCTTCGTTATCGCGATGATCGGTTGGGCCATTATCATCTACGAGATTTTTGCGGGAGAGGCGAGCAAAGCTGCTGGCTCATCAAACGCTTCTGTCCAAGGTGCGTTCAGTGCAATGAGACTTATTGTTCTAGTG LITVPLQMIEFWLILAAVGAAVGGASFLRLLVGTLVMLVFGYLGEAGYMDATIAFVIAMIGWAIIIYEIFAGEASKAAGSSNASVQGAFSAMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTACCTCTCCAAATGATCGAGTTTTGGTTGATTCTAGCAGCT---------GTTGGAGCAGCGGTAGGCGGA---GCATCA------------------------------------TTCTTGCGC---CTTCTTGTTGGTACCTTAGTAATGCTAGTCTTCGGATATTTGGGAGAG---------GCA------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GATGCA------------------ACCATAGCC---TTCGTTATCGCGATGATCGGTTGGGCCATTATCATCTACGAGATT---------------TTT------GCG---GGAGAGGCGAGCAAAGCT---GCTGGC------TCA---TCAAACGCTTCTGTC---CAA---GGT---GCG---TTC---AGT---GCAATG---AGACTTATTGTTCTAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFWLILAA---VGAAVGG-AS------------FLR-LLVGTLVMLVFGYLGE---A------G--Y-----------M----------------------DA------TIA-FVIAMIGWAIIIYEI-----F--A-GEASKA-AG--S-SNASV-Q-G-A-F-S-AM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ929260 [unk-Proteo1-b] PRGD_OTU094_bd6c79ea7cf91153b498a67c610da242 gb|KJ929260| PRGD_OTU094_bd6c79ea7cf91153b498a67c610da242, putative proteorhodopsin gene, partial cds. PRGD_OTU094_bd6c79ea7cf91153b498a67c610da242, putative proteorhodopsin gene, partial cds. KJ929260 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTAATTACTGTACCTCTCCAAATGATAGAGTTTTGGTTGATTCTGGCAGCTGTTGGAGCAGCGGTAGGCGGAGCATCATTCTTGCGCCTTCTTGTTGGTACCTTAGTAATGCTGGTCTTCGGATATTTGGGAGAGGCAGGTTACATGGATGCAACCATAGCCTTCGTTATCGCGATGATCGGTTGGGCCATTATCATCTACGAGATTTTTGCGGGAGAGGCGAGCAAAGCTGCTGGCTCATCAAACGCTTCTGTCCAAGGTGCGTTCAGTGCAATGAGACTTATTGTTCTGGTG LITVPLQMIEFWLILAAVGAAVGGASFLRLLVGTLVMLVFGYLGEAGYMDATIAFVIAMIGWAIIIYEIFAGEASKAAGSSNASVQGAFSAMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTACCTCTCCAAATGATAGAGTTTTGGTTGATTCTGGCAGCT---------GTTGGAGCAGCGGTAGGCGGA---GCATCA------------------------------------TTCTTGCGC---CTTCTTGTTGGTACCTTAGTAATGCTGGTCTTCGGATATTTGGGAGAG---------GCA------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GATGCA------------------ACCATAGCC---TTCGTTATCGCGATGATCGGTTGGGCCATTATCATCTACGAGATT---------------TTT------GCG---GGAGAGGCGAGCAAAGCT---GCTGGC------TCA---TCAAACGCTTCTGTC---CAA---GGT---GCG---TTC---AGT---GCAATG---AGACTTATTGTTCTGGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFWLILAA---VGAAVGG-AS------------FLR-LLVGTLVMLVFGYLGE---A------G--Y-----------M----------------------DA------TIA-FVIAMIGWAIIIYEI-----F--A-GEASKA-AG--S-SNASV-Q-G-A-F-S-AM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ929257 [unk-Proteo1-b] PRGD_OTU094_967e0bdeca2a6ce2bca9cf5ee830b4b3 gb|KJ929257| PRGD_OTU094_967e0bdeca2a6ce2bca9cf5ee830b4b3, putative proteorhodopsin gene, partial cds. PRGD_OTU094_967e0bdeca2a6ce2bca9cf5ee830b4b3, putative proteorhodopsin gene, partial cds. KJ929257 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) CTAATTACTGTACCTCTGCAAATGATCGAGTTTTGGTTGATTCTAGCGGCTGTTGGAGCAGCGGTAGGCGGGGCATCATTCTTGCGTCTTCTTGTTGGCACCTTAGTTATGCTGGTCTTCGGATATTTGGGAGAGGCAGGTTACATGGATGCAACTATAGCCTTTGTTATTGCGATGATCGGATGGGCTATTATCATCTACGAAATCTTTGCGGGAGAGGCGAGCAAAGCTGCTGGCTCATCAAACGCCTCTGTCCAAGGCGCGTTCAGTGCGATGAGACTTATTGTTTTAGTA LITVPLQMIEFWLILAAVGAAVGGASFLRLLVGTLVMLVFGYLGEAGYMDATIAFVIAMIGWAIIIYEIFAGEASKAAGSSNASVQGAFSAMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTACCTCTGCAAATGATCGAGTTTTGGTTGATTCTAGCGGCT---------GTTGGAGCAGCGGTAGGCGGG---GCATCA------------------------------------TTCTTGCGT---CTTCTTGTTGGCACCTTAGTTATGCTGGTCTTCGGATATTTGGGAGAG---------GCA------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GATGCA------------------ACTATAGCC---TTTGTTATTGCGATGATCGGATGGGCTATTATCATCTACGAAATC---------------TTT------GCG---GGAGAGGCGAGCAAAGCT---GCTGGC------TCA---TCAAACGCCTCTGTC---CAA---GGC---GCG---TTC---AGT---GCGATG---AGACTTATTGTTTTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFWLILAA---VGAAVGG-AS------------FLR-LLVGTLVMLVFGYLGE---A------G--Y-----------M----------------------DA------TIA-FVIAMIGWAIIIYEI-----F--A-GEASKA-AG--S-SNASV-Q-G-A-F-S-AM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ929843 [unk-Proteo1-b] PRGD_OTU294_otuREP_8a413d47f78fc7b1598373736b669a48 gb|KJ929843| PRGD_OTU294_otuREP_8a413d47f78fc7b1598373736b669a48, putative proteorhodopsin gene, partial cds. PRGD_OTU294_otuREP_8a413d47f78fc7b1598373736b669a48, putative proteorhodopsin gene, partial cds. KJ929843 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-14.48, 113.45; -33.28, 45.35) CTCATCACCGTGCCTCTTCTTATGATTGAGTTCTGGTTGATCCTGAAAGCAGTAGGGGCTCAGGTTGGCTCAGGCTCTTTCTTGCGGCTGTTAGTTGGTACGCTTGTGATGCTTATCGGCGGATACTGCGGAGAGACCGGTATGATCGACGTAACAATGGGCTTTGTGATCGGCATCATTGGATGGGCTGTCATCATTTACGAGATATTCGCGGGAGAAGCGGGCAAAGCAGCGGGTTCCGCTAGCGAGTCTGTTCAAGGCGCGTTCTCGGCCATGAGACTGATCGTCCTTATA LITVPLLMIEFWLILKAVGAQVGSGSFLRLLVGTLVMLIGGYCGETGMIDVTMGFVIGIIGWAVIIYEIFAGEAGKAAGSASESVQGAFSAMRLIVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACCGTGCCTCTTCTTATGATTGAGTTCTGGTTGATCCTGAAAGCA---------GTAGGGGCTCAGGTTGGCTCA---GGCTCT------------------------------------TTCTTGCGG---CTGTTAGTTGGTACGCTTGTGATGCTTATCGGCGGATACTGCGGAGAG---------ACC------------------GGT------ATG---------------------------------ATC------------------------------------------------------------------GACGTA------------------ACAATGGGC---TTTGTGATCGGCATCATTGGATGGGCTGTCATCATTTACGAGATA---------------TTC------GCG---GGAGAAGCGGGCAAAGCA---GCGGGT------TCC---GCTAGCGAGTCTGTT---CAA---GGC---GCG---TTC---TCG---GCCATG---AGACTGATCGTCCTTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFWLILKA---VGAQVGS-GS------------FLR-LLVGTLVMLIGGYCGE---T------G--M-----------I----------------------DV------TMG-FVIGIIGWAVIIYEI-----F--A-GEAGKA-AG--S-ASESV-Q-G-A-F-S-AM-RLIVLI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928839 [unk-Proteo1-b] PRGD_OTU056_1c037417d8e6c865d822a7d09120b2b3 gb|KJ928839| PRGD_OTU056_1c037417d8e6c865d822a7d09120b2b3, putative proteorhodopsin gene, partial cds. PRGD_OTU056_1c037417d8e6c865d822a7d09120b2b3, putative proteorhodopsin gene, partial cds. KJ928839 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683) TTAATTACGGTGCCGCTACTGATGATTGAGTTCTTCATCATACTTCGTGCCGCAGGGTCAGCGGTAGGCAATGGATCTTTCGTTCGCTTGCTTTTTGGCACGCTTATTATGCTTGTCTTCGGATACATGGGCGAAGCTAAGCTCATGAATCAGGCGTTCGCTTTTGGCCTGGGGATGGTCGGCTGGGCTGTTATTATTTACGAAATCTACGCAGGCGCAGCAGGAACCGCGGCTAAAGAGGCCGGTGCTGCGGTGCAAAGCGCCTTTAGCGCAATGCGCTGGATTGTGTTGGTC LITVPLLMIEFFIILRAAGSAVGNGSFVRLLFGTLIMLVFGYMGEAKLMNQAFAFGLGMVGWAVIIYEIYAGAAGTAAKEAGAAVQSAFSAMRWIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACGGTGCCGCTACTGATGATTGAGTTCTTCATCATACTTCGTGCC---------GCAGGGTCAGCGGTAGGCAAT---GGATCT------------------------------------TTCGTTCGC---TTGCTTTTTGGCACGCTTATTATGCTTGTCTTCGGATACATGGGCGAA---------GCT------------------AAG------CTC---------------------------------ATG------------------------------------------------------------------AATCAG------------------GCGTTCGCT---TTTGGCCTGGGGATGGTCGGCTGGGCTGTTATTATTTACGAAATC---------------TAC------GCA---GGCGCAGCAGGAACCGCG---GCTAAA------GAG---GCCGGTGCTGCGGTG---CAA---AGC---GCC---TTT---AGC---GCAATG---CGCTGGATTGTGTTGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILRA---AGSAVGN-GS------------FVR-LLFGTLIMLVFGYMGE---A------K--L-----------M----------------------NQ------AFA-FGLGMVGWAVIIYEI-----Y--A-GAAGTA-AK--E-AGAAV-Q-S-A-F-S-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928846 [unk-Proteo1-b] PRGD_OTU056_88e25cb2c2997745a092705f9d42ee88 gb|KJ928846| PRGD_OTU056_88e25cb2c2997745a092705f9d42ee88, putative proteorhodopsin gene, partial cds. PRGD_OTU056_88e25cb2c2997745a092705f9d42ee88, putative proteorhodopsin gene, partial cds. KJ928846 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACGGTGCCGCTACTGATGATTGAGTTCTTCATTATACTTCGCGCCGCAGGTTCGGCGGTAGGCAATGGGTCTTTCGTTCGCTTGCTTTTTGGTACGCTCATCATGCTTGTCTTCGGATACATGGGCGAAGCTAAGCTCATGAATCAGGCGTTCGCTTTTGGCCTGGGGATGGTCGGCTGGGCTGTTATTATTTACGAAATCTACGCAGGCGCAGCAGGAACCGCGGCTAAAGAGGCCGGTGCTGCGGTGCAAAGCGCCTTTAGCGCAATGCGCTGGATTGTGTTGGTC LITVPLLMIEFFIILRAAGSAVGNGSFVRLLFGTLIMLVFGYMGEAKLMNQAFAFGLGMVGWAVIIYEIYAGAAGTAAKEAGAAVQSAFSAMRWIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACGGTGCCGCTACTGATGATTGAGTTCTTCATTATACTTCGCGCC---------GCAGGTTCGGCGGTAGGCAAT---GGGTCT------------------------------------TTCGTTCGC---TTGCTTTTTGGTACGCTCATCATGCTTGTCTTCGGATACATGGGCGAA---------GCT------------------AAG------CTC---------------------------------ATG------------------------------------------------------------------AATCAG------------------GCGTTCGCT---TTTGGCCTGGGGATGGTCGGCTGGGCTGTTATTATTTACGAAATC---------------TAC------GCA---GGCGCAGCAGGAACCGCG---GCTAAA------GAG---GCCGGTGCTGCGGTG---CAA---AGC---GCC---TTT---AGC---GCAATG---CGCTGGATTGTGTTGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILRA---AGSAVGN-GS------------FVR-LLFGTLIMLVFGYMGE---A------K--L-----------M----------------------NQ------AFA-FGLGMVGWAVIIYEI-----Y--A-GAAGTA-AK--E-AGAAV-Q-S-A-F-S-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928838 [unk-Proteo1-b] PRGD_OTU056_otuREP_2305daeabc99794f99f99db006bc6a19 gb|KJ928838| PRGD_OTU056_otuREP_2305daeabc99794f99f99db006bc6a19, putative proteorhodopsin gene, partial cds. PRGD_OTU056_otuREP_2305daeabc99794f99f99db006bc6a19, putative proteorhodopsin gene, partial cds. KJ928838 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATTACAGTCCCACTACTGATGATTGAGTTTTTCATCATACTTCGTGCCGCAGGGTCAGCGGTAGGCAATGGATCTTTCGTTCGCTTGCTTTTTGGCACGCTTATTATGCTTGTCTTCGGATACATGGGCGAAGCTAAGCTCATGAATCAGGCGTTCGCTTTTGGCCTGGGGATGGTCGGCTGGGCTGTTATTATTTACGAAATCTACGCAGGCGCAGCAGGAACCGCGGCTAAAGAGGCCGGTGCTGCGGTGCAAAGCGCCTTTAGCGCAATGCGCTGGATTGTGTTGGTC LITVPLLMIEFFIILRAAGSAVGNGSFVRLLFGTLIMLVFGYMGEAKLMNQAFAFGLGMVGWAVIIYEIYAGAAGTAAKEAGAAVQSAFSAMRWIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACAGTCCCACTACTGATGATTGAGTTTTTCATCATACTTCGTGCC---------GCAGGGTCAGCGGTAGGCAAT---GGATCT------------------------------------TTCGTTCGC---TTGCTTTTTGGCACGCTTATTATGCTTGTCTTCGGATACATGGGCGAA---------GCT------------------AAG------CTC---------------------------------ATG------------------------------------------------------------------AATCAG------------------GCGTTCGCT---TTTGGCCTGGGGATGGTCGGCTGGGCTGTTATTATTTACGAAATC---------------TAC------GCA---GGCGCAGCAGGAACCGCG---GCTAAA------GAG---GCCGGTGCTGCGGTG---CAA---AGC---GCC---TTT---AGC---GCAATG---CGCTGGATTGTGTTGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILRA---AGSAVGN-GS------------FVR-LLFGTLIMLVFGYMGE---A------K--L-----------M----------------------NQ------AFA-FGLGMVGWAVIIYEI-----Y--A-GAAGTA-AK--E-AGAAV-Q-S-A-F-S-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928845 [unk-Proteo1-b] PRGD_OTU056_82542deac8543e371cd883f19677724a gb|KJ928845| PRGD_OTU056_82542deac8543e371cd883f19677724a, putative proteorhodopsin gene, partial cds. PRGD_OTU056_82542deac8543e371cd883f19677724a, putative proteorhodopsin gene, partial cds. KJ928845 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACGGTGCCGCTACTGATGATTGAGTTCTTCATTATACTTCGCGCCGCAGGTTCGGCAGTAGGCAATGGGTCTTTCGTTCGTTTGCTTTTTGGTACGCTCATCATGCTTGTCTTCGGATACATGGGCGAAGCAGAGATCATGAATCAAGCGCTCGCTTTTGCCCTGGGCATGGTTGGCTGGGCAGTTATCATTTACGAAATCTATGCAGGCGCAGCAGGAACGGCAGCGAAAGAGGCCGGCGCGGCGGTACAAAGCGCCTTTAGCGCCATGCGTTGGATTGTTTTGGTC LITVPLLMIEFFIILRAAGSAVGNGSFVRLLFGTLIMLVFGYMGEAEIMNQALAFALGMVGWAVIIYEIYAGAAGTAAKEAGAAVQSAFSAMRWIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACGGTGCCGCTACTGATGATTGAGTTCTTCATTATACTTCGCGCC---------GCAGGTTCGGCAGTAGGCAAT---GGGTCT------------------------------------TTCGTTCGT---TTGCTTTTTGGTACGCTCATCATGCTTGTCTTCGGATACATGGGCGAA---------GCA------------------GAG------ATC---------------------------------ATG------------------------------------------------------------------AATCAA------------------GCGCTCGCT---TTTGCCCTGGGCATGGTTGGCTGGGCAGTTATCATTTACGAAATC---------------TAT------GCA---GGCGCAGCAGGAACGGCA---GCGAAA------GAG---GCCGGCGCGGCGGTA---CAA---AGC---GCC---TTT---AGC---GCCATG---CGTTGGATTGTTTTGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILRA---AGSAVGN-GS------------FVR-LLFGTLIMLVFGYMGE---A------E--I-----------M----------------------NQ------ALA-FALGMVGWAVIIYEI-----Y--A-GAAGTA-AK--E-AGAAV-Q-S-A-F-S-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928851 [unk-Proteo1-b] PRGD_OTU056_bdc6ce325707c577cb865fc41a2ae886 gb|KJ928851| PRGD_OTU056_bdc6ce325707c577cb865fc41a2ae886, putative proteorhodopsin gene, partial cds. PRGD_OTU056_bdc6ce325707c577cb865fc41a2ae886, putative proteorhodopsin gene, partial cds. KJ928851 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) TTAATTACGGTGCCGCTACTGATGATTGAGTTCTTCATTATACTTCGCGCCGCAGGTTCGGCGGTAGGCAATGGGTCTTTCGTTCGCTTGCTTTTTGGTACGCTCATCATGCTTGTCTTCGGATACATGGGCGAAGCAGAGATCATGAATCAAGCGCTCGCTTTTGCCCTGGGCATGGTTGGCTGGGCAGTTATCATTTACGAAATCTATGCAGGCGCAGCAGGAACGGCGGCGAAAGAGGCCGGCGCGGCGGTACAAAGCGCCTTTAGCGCCATGCGTTGGATTGTTTTGGTC LITVPLLMIEFFIILRAAGSAVGNGSFVRLLFGTLIMLVFGYMGEAEIMNQALAFALGMVGWAVIIYEIYAGAAGTAAKEAGAAVQSAFSAMRWIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACGGTGCCGCTACTGATGATTGAGTTCTTCATTATACTTCGCGCC---------GCAGGTTCGGCGGTAGGCAAT---GGGTCT------------------------------------TTCGTTCGC---TTGCTTTTTGGTACGCTCATCATGCTTGTCTTCGGATACATGGGCGAA---------GCA------------------GAG------ATC---------------------------------ATG------------------------------------------------------------------AATCAA------------------GCGCTCGCT---TTTGCCCTGGGCATGGTTGGCTGGGCAGTTATCATTTACGAAATC---------------TAT------GCA---GGCGCAGCAGGAACGGCG---GCGAAA------GAG---GCCGGCGCGGCGGTA---CAA---AGC---GCC---TTT---AGC---GCCATG---CGTTGGATTGTTTTGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILRA---AGSAVGN-GS------------FVR-LLFGTLIMLVFGYMGE---A------E--I-----------M----------------------NQ------ALA-FALGMVGWAVIIYEI-----Y--A-GAAGTA-AK--E-AGAAV-Q-S-A-F-S-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928843 [unk-Proteo1-b] PRGD_OTU056_7a59428e1f59fc57ec3949ffb01538bd gb|KJ928843| PRGD_OTU056_7a59428e1f59fc57ec3949ffb01538bd, putative proteorhodopsin gene, partial cds. PRGD_OTU056_7a59428e1f59fc57ec3949ffb01538bd, putative proteorhodopsin gene, partial cds. KJ928843 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATTACAGTCCCACTACTGATGATTGAGTTTTTCATTATACTTCGCGCCGCAGGTTCGGCGGTAGGCAATGGGTCTTTCGTTCGCTTGCTTTTTGGTACGCTCATCATGCTTGTCTTCGGATACATGGGCGAAGCAGAGATCATGAATCAAGCGCTCGCTTTTGCCCTGGGCATGGTTGGCTGGGCAGTTATCATTTACGAAATCTATGCAGGCGCAGCAGGAACGGCGGCGAAAGAGGCCGGCGCGGCGGTACAAAGCGCCTTTAGCGCCATGCGTTGGATTGTTTTGGTC LITVPLLMIEFFIILRAAGSAVGNGSFVRLLFGTLIMLVFGYMGEAEIMNQALAFALGMVGWAVIIYEIYAGAAGTAAKEAGAAVQSAFSAMRWIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACAGTCCCACTACTGATGATTGAGTTTTTCATTATACTTCGCGCC---------GCAGGTTCGGCGGTAGGCAAT---GGGTCT------------------------------------TTCGTTCGC---TTGCTTTTTGGTACGCTCATCATGCTTGTCTTCGGATACATGGGCGAA---------GCA------------------GAG------ATC---------------------------------ATG------------------------------------------------------------------AATCAA------------------GCGCTCGCT---TTTGCCCTGGGCATGGTTGGCTGGGCAGTTATCATTTACGAAATC---------------TAT------GCA---GGCGCAGCAGGAACGGCG---GCGAAA------GAG---GCCGGCGCGGCGGTA---CAA---AGC---GCC---TTT---AGC---GCCATG---CGTTGGATTGTTTTGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILRA---AGSAVGN-GS------------FVR-LLFGTLIMLVFGYMGE---A------E--I-----------M----------------------NQ------ALA-FALGMVGWAVIIYEI-----Y--A-GAAGTA-AK--E-AGAAV-Q-S-A-F-S-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928847 [unk-Proteo1-b] PRGD_OTU056_a7f0a0989a9d9f9043ac5bd4c26beaed gb|KJ928847| PRGD_OTU056_a7f0a0989a9d9f9043ac5bd4c26beaed, putative proteorhodopsin gene, partial cds. PRGD_OTU056_a7f0a0989a9d9f9043ac5bd4c26beaed, putative proteorhodopsin gene, partial cds. KJ928847 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683) TTGATTACAGTCCCACTACTGATGATTGAGTTTTTCATCATACTTCGCGCCGCAGGTTCGGCAGTAGGCAATGGGTCTTTCGTTCGTTTGCTTTTTGGTACGCTCATCATGCTTGTCTTCGGATACATGGGCGAAGCAGAGATCATGAATCAAGCGCTCGCTTTTGCCCTGGGCATGGTTGGCTGGGCAGTTATCATTTACGAAATCTATGCAGGCGCAGCAGGAACGGCAGCGAAAGAGGCCGGCGCGGCGGTACAAAGCGCCTTTAGCGCCATGCGTTGGATTGTTTTGGTC LITVPLLMIEFFIILRAAGSAVGNGSFVRLLFGTLIMLVFGYMGEAEIMNQALAFALGMVGWAVIIYEIYAGAAGTAAKEAGAAVQSAFSAMRWIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACAGTCCCACTACTGATGATTGAGTTTTTCATCATACTTCGCGCC---------GCAGGTTCGGCAGTAGGCAAT---GGGTCT------------------------------------TTCGTTCGT---TTGCTTTTTGGTACGCTCATCATGCTTGTCTTCGGATACATGGGCGAA---------GCA------------------GAG------ATC---------------------------------ATG------------------------------------------------------------------AATCAA------------------GCGCTCGCT---TTTGCCCTGGGCATGGTTGGCTGGGCAGTTATCATTTACGAAATC---------------TAT------GCA---GGCGCAGCAGGAACGGCA---GCGAAA------GAG---GCCGGCGCGGCGGTA---CAA---AGC---GCC---TTT---AGC---GCCATG---CGTTGGATTGTTTTGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILRA---AGSAVGN-GS------------FVR-LLFGTLIMLVFGYMGE---A------E--I-----------M----------------------NQ------ALA-FALGMVGWAVIIYEI-----Y--A-GAAGTA-AK--E-AGAAV-Q-S-A-F-S-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928849 [unk-Proteo1-b] PRGD_OTU056_b357ce27bb98fe6e3572448eb2639d36 gb|KJ928849| PRGD_OTU056_b357ce27bb98fe6e3572448eb2639d36, putative proteorhodopsin gene, partial cds. PRGD_OTU056_b357ce27bb98fe6e3572448eb2639d36, putative proteorhodopsin gene, partial cds. KJ928849 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) TTGATCACAGTGCCACTACTGATGATTGAGTTTTTCATCATACTTCGCGCCGCAGGTTCAGCGGTAGGCAATGGATCGTTCGTTCGATTGCTTTTTGGCACGCTCATCATGCTTGTGTTCGGATACATGGGCGAAGCTGAGCTCATGAATCAAGCGCTCGCGTTTGGCCTTGGGATGGTCGGTTGGGCGGTTATTATCTACGAAATCTATGCAGGTGCAGCAGGAACCGCGGCGAAAGAGGCCGGGGCGGCGGTGCAAAGCGCCTTTAGCGCAATGCGCTGGATTGTATTGGTC LITVPLLMIEFFIILRAAGSAVGNGSFVRLLFGTLIMLVFGYMGEAELMNQALAFGLGMVGWAVIIYEIYAGAAGTAAKEAGAAVQSAFSAMRWIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTGCCACTACTGATGATTGAGTTTTTCATCATACTTCGCGCC---------GCAGGTTCAGCGGTAGGCAAT---GGATCG------------------------------------TTCGTTCGA---TTGCTTTTTGGCACGCTCATCATGCTTGTGTTCGGATACATGGGCGAA---------GCT------------------GAG------CTC---------------------------------ATG------------------------------------------------------------------AATCAA------------------GCGCTCGCG---TTTGGCCTTGGGATGGTCGGTTGGGCGGTTATTATCTACGAAATC---------------TAT------GCA---GGTGCAGCAGGAACCGCG---GCGAAA------GAG---GCCGGGGCGGCGGTG---CAA---AGC---GCC---TTT---AGC---GCAATG---CGCTGGATTGTATTGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILRA---AGSAVGN-GS------------FVR-LLFGTLIMLVFGYMGE---A------E--L-----------M----------------------NQ------ALA-FGLGMVGWAVIIYEI-----Y--A-GAAGTA-AK--E-AGAAV-Q-S-A-F-S-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928850 [unk-Proteo1-b] PRGD_OTU056_bbabc6a483f3cdb0e91f96a7a8e7604f gb|KJ928850| PRGD_OTU056_bbabc6a483f3cdb0e91f96a7a8e7604f, putative proteorhodopsin gene, partial cds. PRGD_OTU056_bbabc6a483f3cdb0e91f96a7a8e7604f, putative proteorhodopsin gene, partial cds. KJ928850 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683) TTGATTACAGTGCCACTGCTGATGATTGAGTTTTTTATCATACTTCGAGCCGCAGGCTCAGCGGTAGGCAATGGATCTTTCGTTCGCTTGCTTTTTGGCACGCTCATCATGCTTGTCTTCGGATACATGGGCGAAGCTGAGCTCATGAATCAAGCGCTCGCTTTTGGACTCGGGTTGGTCGGATGGGCGGTTATAATTTACGAAATTTATGCAGGTGCAGCAGGAACCGCGGCGAAAGAGGCCGGTGCGGCAGTGCAAAGCGCTTTCAGCGCAATGCGCTGGATTGTGTTAGTT LITVPLLMIEFFIILRAAGSAVGNGSFVRLLFGTLIMLVFGYMGEAELMNQALAFGLGLVGWAVIIYEIYAGAAGTAAKEAGAAVQSAFSAMRWIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACAGTGCCACTGCTGATGATTGAGTTTTTTATCATACTTCGAGCC---------GCAGGCTCAGCGGTAGGCAAT---GGATCT------------------------------------TTCGTTCGC---TTGCTTTTTGGCACGCTCATCATGCTTGTCTTCGGATACATGGGCGAA---------GCT------------------GAG------CTC---------------------------------ATG------------------------------------------------------------------AATCAA------------------GCGCTCGCT---TTTGGACTCGGGTTGGTCGGATGGGCGGTTATAATTTACGAAATT---------------TAT------GCA---GGTGCAGCAGGAACCGCG---GCGAAA------GAG---GCCGGTGCGGCAGTG---CAA---AGC---GCT---TTC---AGC---GCAATG---CGCTGGATTGTGTTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILRA---AGSAVGN-GS------------FVR-LLFGTLIMLVFGYMGE---A------E--L-----------M----------------------NQ------ALA-FGLGLVGWAVIIYEI-----Y--A-GAAGTA-AK--E-AGAAV-Q-S-A-F-S-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928853 [unk-Proteo1-b] PRGD_OTU056_cbad88f3492e879169ebafcfb040f504 gb|KJ928853| PRGD_OTU056_cbad88f3492e879169ebafcfb040f504, putative proteorhodopsin gene, partial cds. PRGD_OTU056_cbad88f3492e879169ebafcfb040f504, putative proteorhodopsin gene, partial cds. KJ928853 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683) TTGATTACAGTGCCACTACTGATGATTGAGTTTTTTATCATACTTCGAGCCGCAGGCTCAGCGGTAGGCAATGGATCTTTCGTTCGCTTGCTTTTTGGCACGCTCATCATGCTTGTCTTCGGATACATGGGCGAAGCTGAGCTCATGAATCAAGCGCTCGCTTTTGGACTCGGGTTGGTCGGATGGGCGGTTATAATTTACGAAATCTATGCAGGTGCAGCAGGAACCGCGGCGAAAGAGGCCGGTGCGGCAGTGCAAAGCGCCTTCAGCGCAATGCGCTGGATTGTGTTAGTT LITVPLLMIEFFIILRAAGSAVGNGSFVRLLFGTLIMLVFGYMGEAELMNQALAFGLGLVGWAVIIYEIYAGAAGTAAKEAGAAVQSAFSAMRWIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACAGTGCCACTACTGATGATTGAGTTTTTTATCATACTTCGAGCC---------GCAGGCTCAGCGGTAGGCAAT---GGATCT------------------------------------TTCGTTCGC---TTGCTTTTTGGCACGCTCATCATGCTTGTCTTCGGATACATGGGCGAA---------GCT------------------GAG------CTC---------------------------------ATG------------------------------------------------------------------AATCAA------------------GCGCTCGCT---TTTGGACTCGGGTTGGTCGGATGGGCGGTTATAATTTACGAAATC---------------TAT------GCA---GGTGCAGCAGGAACCGCG---GCGAAA------GAG---GCCGGTGCGGCAGTG---CAA---AGC---GCC---TTC---AGC---GCAATG---CGCTGGATTGTGTTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILRA---AGSAVGN-GS------------FVR-LLFGTLIMLVFGYMGE---A------E--L-----------M----------------------NQ------ALA-FGLGLVGWAVIIYEI-----Y--A-GAAGTA-AK--E-AGAAV-Q-S-A-F-S-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928840 [unk-Proteo1-b] PRGD_OTU056_27701d636d1953e8fa00926334ff857a gb|KJ928840| PRGD_OTU056_27701d636d1953e8fa00926334ff857a, putative proteorhodopsin gene, partial cds. PRGD_OTU056_27701d636d1953e8fa00926334ff857a, putative proteorhodopsin gene, partial cds. KJ928840 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175; 33.935, 18.508), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTGATCACCGTACCATTATTAATGATAGAGTTCTTTATCATTCTTCGTGCAGCCGGTTCCAAGGTAGGCAACGGATCTTTTGTCAGGCTGCTTTTTGGTACTTTGATGATGCTGCTGTTTGGCTTCTTGGGCGAAGCGAACATAATGACAAATCAAGCACTTGCTTTTGGCCTTGGAATGGTAGGTTGGGCAATCATTATCTACGAGATATTTGCGGGCGCAGCAGGCAATGCCGCGAAAGAAGCAAACGAAGCGGTACGATCTGCATTCAGTGCAATGCGGTGGATTGTTTTGGTG LITVPLLMIEFFIILRAAGSKVGNGSFVRLLFGTLMMLLFGFLGEANIMTNQALAFGLGMVGWAIIIYEIFAGAAGNAAKEANEAVRSAFSAMRWIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTACCATTATTAATGATAGAGTTCTTTATCATTCTTCGTGCA---------GCCGGTTCCAAGGTAGGCAAC---GGATCT------------------------------------TTTGTCAGG---CTGCTTTTTGGTACTTTGATGATGCTGCTGTTTGGCTTCTTGGGCGAA---------GCG------------------AAC------ATA---------------------------------ATG---------------------------------------------------------------ACAAATCAA------------------GCACTTGCT---TTTGGCCTTGGAATGGTAGGTTGGGCAATCATTATCTACGAGATA---------------TTT------GCG---GGCGCAGCAGGCAATGCC---GCGAAA------GAA---GCAAACGAAGCGGTA---CGA---TCT---GCA---TTC---AGT---GCAATG---CGGTGGATTGTTTTGGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILRA---AGSKVGN-GS------------FVR-LLFGTLMMLLFGFLGE---A------N--I-----------M---------------------TNQ------ALA-FGLGMVGWAIIIYEI-----F--A-GAAGNA-AK--E-ANEAV-R-S-A-F-S-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928848 [unk-Proteo1-b] PRGD_OTU056_b1568efb0ce0215d8d92ab2bc4a283f4 gb|KJ928848| PRGD_OTU056_b1568efb0ce0215d8d92ab2bc4a283f4, putative proteorhodopsin gene, partial cds. PRGD_OTU056_b1568efb0ce0215d8d92ab2bc4a283f4, putative proteorhodopsin gene, partial cds. KJ928848 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185) CTGATCACCGTACCATTATTAATGATAGAGTTCTTTATCATTCTTCGTGCAGCCGGTTCCAAGGTAGGCAACGGATCTTTTGTCAGGTTGCTTTTTGGTACTTTGATGATGCTGCTGTTTGGCTTCTTGGGCGAAGCGGAAATAATGACAAATCAAGCACTTGCTTTTGGCCTTGGAATGGTAGGTTGGGCAATCATTATCTACGAGATATTTGCGGGCGCAGCAGGCAATGCCGCGAAAGAAGCAAACGAAGCGGTAAGGTCTGCATTCAGTGCAATGCGGTGGATTGTTTTGGTG LITVPLLMIEFFIILRAAGSKVGNGSFVRLLFGTLMMLLFGFLGEAEIMTNQALAFGLGMVGWAIIIYEIFAGAAGNAAKEANEAVRSAFSAMRWIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTACCATTATTAATGATAGAGTTCTTTATCATTCTTCGTGCA---------GCCGGTTCCAAGGTAGGCAAC---GGATCT------------------------------------TTTGTCAGG---TTGCTTTTTGGTACTTTGATGATGCTGCTGTTTGGCTTCTTGGGCGAA---------GCG------------------GAA------ATA---------------------------------ATG---------------------------------------------------------------ACAAATCAA------------------GCACTTGCT---TTTGGCCTTGGAATGGTAGGTTGGGCAATCATTATCTACGAGATA---------------TTT------GCG---GGCGCAGCAGGCAATGCC---GCGAAA------GAA---GCAAACGAAGCGGTA---AGG---TCT---GCA---TTC---AGT---GCAATG---CGGTGGATTGTTTTGGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILRA---AGSKVGN-GS------------FVR-LLFGTLMMLLFGFLGE---A------E--I-----------M---------------------TNQ------ALA-FGLGMVGWAIIIYEI-----F--A-GAAGNA-AK--E-ANEAV-R-S-A-F-S-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928842 [unk-Proteo1-b] PRGD_OTU056_798aa342e1d94684481a8db66bd30fc8 gb|KJ928842| PRGD_OTU056_798aa342e1d94684481a8db66bd30fc8, putative proteorhodopsin gene, partial cds. PRGD_OTU056_798aa342e1d94684481a8db66bd30fc8, putative proteorhodopsin gene, partial cds. KJ928842 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73) CTGATCACCGTACCATTATTAATGATAGAGTTCTTTATCATTCTTCGTGCAGCCGGTTCCAAGGTAGGCAACGGATCTTTTGTCAGGTTGCTTTTTGGTACTTTGATAATGCTGCTGTTTGGCTTCTTGGGCGAAGCGGAAATAATGACAAATCAAGCACTTGCTTTTGGCCTTGGAATGGTAGGTTGGGCAATCATTATCTACGAGATATTTGCGGGCGCAGCTGGCAATGCCGCGAAAGAAGCAAACGAAGCGGTACGATCTGCATTCAGTGCAATGCGGTGGATTGTTTTGGTG LITVPLLMIEFFIILRAAGSKVGNGSFVRLLFGTLIMLLFGFLGEAEIMTNQALAFGLGMVGWAIIIYEIFAGAAGNAAKEANEAVRSAFSAMRWIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTACCATTATTAATGATAGAGTTCTTTATCATTCTTCGTGCA---------GCCGGTTCCAAGGTAGGCAAC---GGATCT------------------------------------TTTGTCAGG---TTGCTTTTTGGTACTTTGATAATGCTGCTGTTTGGCTTCTTGGGCGAA---------GCG------------------GAA------ATA---------------------------------ATG---------------------------------------------------------------ACAAATCAA------------------GCACTTGCT---TTTGGCCTTGGAATGGTAGGTTGGGCAATCATTATCTACGAGATA---------------TTT------GCG---GGCGCAGCTGGCAATGCC---GCGAAA------GAA---GCAAACGAAGCGGTA---CGA---TCT---GCA---TTC---AGT---GCAATG---CGGTGGATTGTTTTGGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILRA---AGSKVGN-GS------------FVR-LLFGTLIMLLFGFLGE---A------E--I-----------M---------------------TNQ------ALA-FGLGMVGWAIIIYEI-----F--A-GAAGNA-AK--E-ANEAV-R-S-A-F-S-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928841 [unk-Proteo1-b] PRGD_OTU056_43c8615dbae1eafb4a6921aa40edaac0 gb|KJ928841| PRGD_OTU056_43c8615dbae1eafb4a6921aa40edaac0, putative proteorhodopsin gene, partial cds. PRGD_OTU056_43c8615dbae1eafb4a6921aa40edaac0, putative proteorhodopsin gene, partial cds. KJ928841 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683) TTGATTACAGTGCCATTGTTAATGATCGAGTTCTTTATCATTCTCCGAGCAGCCGGGTCTGCCGTGGGTAATGGTTCTTTCGTAAGACTGCTTTTTGGTACCTTAGTGATGCTTGTGTTTGGTTACTTGGGCGAGGCTGGCATGATGGACGCAACAGTTGCGTTTGGTCTTGGAATGGTCGGTTGGGCAGTGATTATTTACGAGATATTCGCTGGCGCTGCGGGTAGTGCTGCCAAGGAAGCAAGCGAAGCTGTTCAATCAGCATTTAGCGCAATGCGCTGGATCGTCTTAATC LITVPLLMIEFFIILRAAGSAVGNGSFVRLLFGTLVMLVFGYLGEAGMMDATVAFGLGMVGWAVIIYEIFAGAAGSAAKEASEAVQSAFSAMRWIVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACAGTGCCATTGTTAATGATCGAGTTCTTTATCATTCTCCGAGCA---------GCCGGGTCTGCCGTGGGTAAT---GGTTCT------------------------------------TTCGTAAGA---CTGCTTTTTGGTACCTTAGTGATGCTTGTGTTTGGTTACTTGGGCGAG---------GCT------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GACGCA------------------ACAGTTGCG---TTTGGTCTTGGAATGGTCGGTTGGGCAGTGATTATTTACGAGATA---------------TTC------GCT---GGCGCTGCGGGTAGTGCT---GCCAAG------GAA---GCAAGCGAAGCTGTT---CAA---TCA---GCA---TTT---AGC---GCAATG---CGCTGGATCGTCTTAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILRA---AGSAVGN-GS------------FVR-LLFGTLVMLVFGYLGE---A------G--M-----------M----------------------DA------TVA-FGLGMVGWAVIIYEI-----F--A-GAAGSA-AK--E-ASEAV-Q-S-A-F-S-AM-RWIVLI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928844 [unk-Proteo1-b] PRGD_OTU056_7c8bf011fd1bf0e26eb3e7cd68278d53 gb|KJ928844| PRGD_OTU056_7c8bf011fd1bf0e26eb3e7cd68278d53, putative proteorhodopsin gene, partial cds. PRGD_OTU056_7c8bf011fd1bf0e26eb3e7cd68278d53, putative proteorhodopsin gene, partial cds. KJ928844 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATTACAGTGCCATTGTTAATGATCGAGTTCTTTATCATTCTCCGAGCAGCCGGGTCTGCCGTGGGTAATGGTTCTTTCGTAAGACTGCTTTTTGGTACCTTAGTGATGCTTGTGTTTGGTTACTTGGGCGAGGCTGGCATGATGGACGCAACAGTTGCGTTTGGTCTTGGAATGGTCGGTTGGGCAGTGATTATTTACGAGATATTCGCTGGCGCTGCAGGCAGTGCTGCCAAGGAAGCAAGCGAAGCTGTTCAATCAGCATTTAGCGCTATGCGCTGGATCGTCTTAGTT LITVPLLMIEFFIILRAAGSAVGNGSFVRLLFGTLVMLVFGYLGEAGMMDATVAFGLGMVGWAVIIYEIFAGAAGSAAKEASEAVQSAFSAMRWIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACAGTGCCATTGTTAATGATCGAGTTCTTTATCATTCTCCGAGCA---------GCCGGGTCTGCCGTGGGTAAT---GGTTCT------------------------------------TTCGTAAGA---CTGCTTTTTGGTACCTTAGTGATGCTTGTGTTTGGTTACTTGGGCGAG---------GCT------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GACGCA------------------ACAGTTGCG---TTTGGTCTTGGAATGGTCGGTTGGGCAGTGATTATTTACGAGATA---------------TTC------GCT---GGCGCTGCAGGCAGTGCT---GCCAAG------GAA---GCAAGCGAAGCTGTT---CAA---TCA---GCA---TTT---AGC---GCTATG---CGCTGGATCGTCTTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILRA---AGSAVGN-GS------------FVR-LLFGTLVMLVFGYLGE---A------G--M-----------M----------------------DA------TVA-FGLGMVGWAVIIYEI-----F--A-GAAGSA-AK--E-ASEAV-Q-S-A-F-S-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ928852 [unk-Proteo1-b] PRGD_OTU056_c682edde56d7ae60cdc5855f708299bc gb|KJ928852| PRGD_OTU056_c682edde56d7ae60cdc5855f708299bc, putative proteorhodopsin gene, partial cds. PRGD_OTU056_c682edde56d7ae60cdc5855f708299bc, putative proteorhodopsin gene, partial cds. KJ928852 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637; -33.9602, -73.3769), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) TTGATTACAGTGCCACTATTGATGATTGAGTTTTTCATCATCCTTCGCGCAGCTGGTTCGGCAGTTGGCAATGGATCTTTTGTTAGACTACTTTTTGGTACTCTGTTTATGCTGGTGTTTGGCTACATGGGCGAGTCTGGTCAGATGGATCAAACGATTGCGTTTGGACTTGGAATGATTGGTTGGGCAGTGATTATCTACGAGATATTCGCTGGCGCTGCAGGCAATGCTGCTAAAGAAGCAGGGGAAGCTGTGCAATCAGCATTCAGCGCAATGCGTTGGATTGTTTTAGTT LITVPLLMIEFFIILRAAGSAVGNGSFVRLLFGTLFMLVFGYMGESGQMDQTIAFGLGMIGWAVIIYEIFAGAAGNAAKEAGEAVQSAFSAMRWIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACAGTGCCACTATTGATGATTGAGTTTTTCATCATCCTTCGCGCA---------GCTGGTTCGGCAGTTGGCAAT---GGATCT------------------------------------TTTGTTAGA---CTACTTTTTGGTACTCTGTTTATGCTGGTGTTTGGCTACATGGGCGAG---------TCT------------------GGT------CAG---------------------------------ATG------------------------------------------------------------------GATCAA------------------ACGATTGCG---TTTGGACTTGGAATGATTGGTTGGGCAGTGATTATCTACGAGATA---------------TTC------GCT---GGCGCTGCAGGCAATGCT---GCTAAA------GAA---GCAGGGGAAGCTGTG---CAA---TCA---GCA---TTC---AGC---GCAATG---CGTTGGATTGTTTTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILRA---AGSAVGN-GS------------FVR-LLFGTLFMLVFGYMGE---S------G--Q-----------M----------------------DQ------TIA-FGLGMIGWAVIIYEI-----F--A-GAAGNA-AK--E-AGEAV-Q-S-A-F-S-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ929863 [unk-Proteo1-b] PRGD_OTU314_otuREP_068200136282d266c3de0d865a35bda5 gb|KJ929863| PRGD_OTU314_otuREP_068200136282d266c3de0d865a35bda5, putative proteorhodopsin gene, partial cds. PRGD_OTU314_otuREP_068200136282d266c3de0d865a35bda5, putative proteorhodopsin gene, partial cds. KJ929863 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump D97 ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683) GGAGAAGTTTCCGTTGAATATCGATACATGGACTGGATCATTACCGTTCCATTGATGGCCCTCAAATTCCCGACACTTATCGGCAAAGATGCAATCACTGACAAAAAGGTCGCTGGCCTTGGATTCACTGGTATCTGTTTCACAGGTGCACTTATCATGATTGGATTTGGCTACGCTGGAGAAGCAGGCCTCATGAACGCTATCCCAGCACTCTTGCTTGGTGGAATG GEVSVEYRYMDWIITVPLMALKFPTLIGKDAITDKKVAGLGFTGICFTGALIMIGFGYAGEAGLMNAIPALLLGGM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAGAAGTTTCCGTTGAATATCGATACATGGACTGG------------------------ATCATTACCGTTCCATTGATGGCCCTCAAATTCCCGACACTTATCGGCAAAGATGCAATCACTGACAAAAAGGTCGCTGGCCTTGGATTC------------------------------------ACTGGTATC---TGTTTCACAGGTGCACTTATCATGATTGGATTTGGCTACGCTGGAGAA---------GCA------------------GGC------CTC---------------------------------ATG------------------------------------------------------------------AACGCT------------------ATCCCAGCA---CTCTTGCTTGGTGGAATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GEVSVEYRYMDW--------IITVPLMALKFPTLIGKDAITDKKVAGLGF------------TGI-CFTGALIMIGFGYAGE---A------G--L-----------M----------------------NA------IPA-LLLGGM----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ929779 [unk-Proteo1-b] PRGD_OTU241_041e30e0c70950a21dc646c16a466450 gb|KJ929779| PRGD_OTU241_041e30e0c70950a21dc646c16a466450, putative proteorhodopsin gene, partial cds. PRGD_OTU241_041e30e0c70950a21dc646c16a466450, putative proteorhodopsin gene, partial cds. KJ929779 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (33.762, 29.175), Indian Ocean (-35.05, 23.73) CTTATCACCGTTCCCCTGCTAATGGTCGAGTTCTACATCATCCTGCGGGCCGTCGGTGCAGCCGTCGGTTCGGGATCTTTTCTCCGGCTACTGCTGGGCACCCTCGGCATGTTGGTCTTCGGCTACCTTGGTGAAGCAGACCTCATGAATGTAACCCTAGCTTTCTGGCTTGGTATGGTCGGCTGGGCAGTCATCATTTACGAGATTTTCGCTGGCGCCGCAGGCACCGCCGTCAAGTCGGTATCCCCGGCTGTCGCTTCCGCATTCAATTCAATGCGCCTCATTGTCCTCGTG LITVPLLMVEFYIILRAVGAAVGSGSFLRLLLGTLGMLVFGYLGEADLMNVTLAFWLGMVGWAVIIYEIFAGAAGTAVKSVSPAVASAFNSMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATCACCGTTCCCCTGCTAATGGTCGAGTTCTACATCATCCTGCGGGCC---------GTCGGTGCAGCCGTCGGTTCG---GGATCT------------------------------------TTTCTCCGG---CTACTGCTGGGCACCCTCGGCATGTTGGTCTTCGGCTACCTTGGTGAA---------GCA------------------GAC------CTC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACCCTAGCT---TTCTGGCTTGGTATGGTCGGCTGGGCAGTCATCATTTACGAGATT---------------TTC------GCT---GGCGCCGCAGGCACCGCCGTC---AAG------TCG---GTATCCCCGGCTGTC---GCT---TCC---GCA---TTC---AAT---TCAATG---CGCCTCATTGTCCTCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYIILRA---VGAAVGS-GS------------FLR-LLLGTLGMLVFGYLGE---A------D--L-----------M----------------------NV------TLA-FWLGMVGWAVIIYEI-----F--A-GAAGTAV-K--S-VSPAV-A-S-A-F-N-SM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ929778 [unk-Proteo1-b] PRGD_OTU241_otuREP_e329db74cbb0cd64a88f2462ba0629a6 gb|KJ929778| PRGD_OTU241_otuREP_e329db74cbb0cd64a88f2462ba0629a6, putative proteorhodopsin gene, partial cds. PRGD_OTU241_otuREP_e329db74cbb0cd64a88f2462ba0629a6, putative proteorhodopsin gene, partial cds. KJ929778 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTATCACCGTTCCGCTGCTAATGGTTGAGTTCTACATCATCCTGCGGGCTGTCGGTGCAGCCGTCGGTTCCGGATCTTTTCTCCGGCTACTGCTGGGCACCCTGGGCATGTTGGTCTTCGGCTATCTTGGTGAAGCAGACCTCATGAATGTAACCCTGGCTTTCTGGCTTGGTATGGTCGGCTGGGCCGTCATCATTTACGAGATTTTCGCTGGTGCCGCAGGCACCGCCGTCAAGTCCGTATCCCCGGCTGTTGCTTCCGCATTCAATTCGATGCGCCTCATTGTCCTCGTC LITVPLLMVEFYIILRAVGAAVGSGSFLRLLLGTLGMLVFGYLGEADLMNVTLAFWLGMVGWAVIIYEIFAGAAGTAVKSVSPAVASAFNSMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATCACCGTTCCGCTGCTAATGGTTGAGTTCTACATCATCCTGCGGGCT---------GTCGGTGCAGCCGTCGGTTCC---GGATCT------------------------------------TTTCTCCGG---CTACTGCTGGGCACCCTGGGCATGTTGGTCTTCGGCTATCTTGGTGAA---------GCA------------------GAC------CTC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACCCTGGCT---TTCTGGCTTGGTATGGTCGGCTGGGCCGTCATCATTTACGAGATT---------------TTC------GCT---GGTGCCGCAGGCACCGCCGTC---AAG------TCC---GTATCCCCGGCTGTT---GCT---TCC---GCA---TTC---AAT---TCGATG---CGCCTCATTGTCCTCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFYIILRA---VGAAVGS-GS------------FLR-LLLGTLGMLVFGYLGE---A------D--L-----------M----------------------NV------TLA-FWLGMVGWAVIIYEI-----F--A-GAAGTAV-K--S-VSPAV-A-S-A-F-N-SM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ929870 [unk-Proteo1-b] PRGD_OTU321_otuREP_fd04e1f4e0f105840fa7598f0f8f1a70 gb|KJ929870| PRGD_OTU321_otuREP_fd04e1f4e0f105840fa7598f0f8f1a70, putative proteorhodopsin gene, partial cds. PRGD_OTU321_otuREP_fd04e1f4e0f105840fa7598f0f8f1a70, putative proteorhodopsin gene, partial cds. KJ929870 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73) TTAATTACCGTACCGCTACTGATGATTGAATTCTTCATCATTCTACGTGCGGTAGGCGGCGCTGTTGGTGCGGCTTCATTCAACAAGCTGCTATTCGGTACGCTGGTCATGTTGGTCTTCGGCTATTTAGGCGAAGCAGGTGTGATGAGCGCGACACTCGGTTTCTGGCTTGGGATGGTCGGATGGGCAATCATCATTCATGAGATCTATTTGGGTGCGGCCGCGCAAGCCTCAGGTGCAGCCGGCGGTGCGGTACAGTCTGCTTTCAACGCGATGCGTTGGATTGTTCTGGTG LITVPLLMIEFFIILRAVGGAVGAASFNKLLFGTLVMLVFGYLGEAGVMSATLGFWLGMVGWAIIIHEIYLGAAAQASGAAGGAVQSAFNAMRWIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACCGTACCGCTACTGATGATTGAATTCTTCATCATTCTACGTGCG---------GTAGGCGGCGCTGTTGGTGCG---GCTTCA------------------------------------TTCAACAAG---CTGCTATTCGGTACGCTGGTCATGTTGGTCTTCGGCTATTTAGGCGAA---------GCA------------------GGT------GTG---------------------------------ATG------------------------------------------------------------------AGCGCG------------------ACACTCGGT---TTCTGGCTTGGGATGGTCGGATGGGCAATCATCATTCATGAGATC---------------TAT------TTG---GGTGCGGCCGCGCAAGCC---TCAGGT------GCA---GCCGGCGGTGCGGTA---CAG---TCT---GCT---TTC---AAC---GCGATG---CGTTGGATTGTTCTGGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILRA---VGGAVGA-AS------------FNK-LLFGTLVMLVFGYLGE---A------G--V-----------M----------------------SA------TLG-FWLGMVGWAIIIHEI-----Y--L-GAAAQA-SG--A-AGGAV-Q-S-A-F-N-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ929101 [unk-Proteo1-b] PRGD_OTU075_dbbfb0fd18f511d33a5ac2c6fc93e081 gb|KJ929101| PRGD_OTU075_dbbfb0fd18f511d33a5ac2c6fc93e081, putative proteorhodopsin gene, partial cds. PRGD_OTU075_dbbfb0fd18f511d33a5ac2c6fc93e081, putative proteorhodopsin gene, partial cds. KJ929101 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTGATTACCGTACCGCTCTTAATGATCGAATTCTTCCTTATCTTGCGCGCAGTCGGTGCATCAGTGGGAGCTGGATCATTCATGCGGCTGTTAGTCGGTACTTTAGTCATGCTCGTATTTGGCTACGCGGGTGAAGCTGGGTTGATGGATTACACGTTGGGATTCATTCTAGGGATGGTCGGATGGATTGTGATCATCTATGAGATCTTCGCCGGAGAAGCTGGGAAAGCTGCGGGTAATGCCTCAGGGTCTGTTCAGTCAGCATACAATGCGATGCGTTGGATTGTGCTAGTT LITVPLLMIEFFLILRAVGASVGAGSFMRLLVGTLVMLVFGYAGEAGLMDYTLGFILGMVGWIVIIYEIFAGEAGKAAGNASGSVQSAYNAMRWIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACCGTACCGCTCTTAATGATCGAATTCTTCCTTATCTTGCGCGCA---------GTCGGTGCATCAGTGGGAGCT---GGATCA------------------------------------TTCATGCGG---CTGTTAGTCGGTACTTTAGTCATGCTCGTATTTGGCTACGCGGGTGAA---------GCT------------------GGG------TTG---------------------------------ATG------------------------------------------------------------------GATTAC------------------ACGTTGGGA---TTCATTCTAGGGATGGTCGGATGGATTGTGATCATCTATGAGATC---------------TTC------GCC---GGAGAAGCTGGGAAAGCT---GCGGGT------AAT---GCCTCAGGGTCTGTT---CAG---TCA---GCA---TAC---AAT---GCGATG---CGTTGGATTGTGCTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFLILRA---VGASVGA-GS------------FMR-LLVGTLVMLVFGYAGE---A------G--L-----------M----------------------DY------TLG-FILGMVGWIVIIYEI-----F--A-GEAGKA-AG--N-ASGSV-Q-S-A-Y-N-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ929099 [unk-Proteo1-b] PRGD_OTU075_b20ad256e2d086d5a4f8eca8d3113d57 gb|KJ929099| PRGD_OTU075_b20ad256e2d086d5a4f8eca8d3113d57, putative proteorhodopsin gene, partial cds. PRGD_OTU075_b20ad256e2d086d5a4f8eca8d3113d57, putative proteorhodopsin gene, partial cds. KJ929099 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73) TTGATCACCGTACCGCTCTTAATGATCGAGTTCTTCCTTATTTTGCGCGCAGTTGGTGCATCAGTGGGAGCTGGCTCATTCATGCGGCTGTTAGTCGGTACTTTAGTCATGCTCGTATTCGGCTACGCGGGTGAAGCTGGGTTGATGGATTACACGTTGGGATTCGTCCTAGGGATGGTCGGATGGATTGTGATCATCTATGAGATCTTCGCCGGAGAGGCTGGAAAAGCTGCAGGTAATGCCTCAGGGTCTGTTCAGTCAGCATACAATGCGATGCGTTGGATTGTGCTGGTC LITVPLLMIEFFLILRAVGASVGAGSFMRLLVGTLVMLVFGYAGEAGLMDYTLGFVLGMVGWIVIIYEIFAGEAGKAAGNASGSVQSAYNAMRWIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTACCGCTCTTAATGATCGAGTTCTTCCTTATTTTGCGCGCA---------GTTGGTGCATCAGTGGGAGCT---GGCTCA------------------------------------TTCATGCGG---CTGTTAGTCGGTACTTTAGTCATGCTCGTATTCGGCTACGCGGGTGAA---------GCT------------------GGG------TTG---------------------------------ATG------------------------------------------------------------------GATTAC------------------ACGTTGGGA---TTCGTCCTAGGGATGGTCGGATGGATTGTGATCATCTATGAGATC---------------TTC------GCC---GGAGAGGCTGGAAAAGCT---GCAGGT------AAT---GCCTCAGGGTCTGTT---CAG---TCA---GCA---TAC---AAT---GCGATG---CGTTGGATTGTGCTGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFLILRA---VGASVGA-GS------------FMR-LLVGTLVMLVFGYAGE---A------G--L-----------M----------------------DY------TLG-FVLGMVGWIVIIYEI-----F--A-GEAGKA-AG--N-ASGSV-Q-S-A-Y-N-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ929098 [unk-Proteo1-b] PRGD_OTU075_6a31538b50c36bfa24d70e597fe49a89 gb|KJ929098| PRGD_OTU075_6a31538b50c36bfa24d70e597fe49a89, putative proteorhodopsin gene, partial cds. PRGD_OTU075_6a31538b50c36bfa24d70e597fe49a89, putative proteorhodopsin gene, partial cds. KJ929098 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATTACCGTGCCGCTCTTAATGATTGAATTCTTCCTTATTTTGCGCGCAGTCGGTGCATCAGTCGGAGCAGGCTCGTTCGTGCGGCTGTTAGTCGGTACTTTAGTCATGCTTGTGTTCGGTTACGCGGGTGAAGCTGGGTTGATGGATTACACGTTGGGATTCGTCCTAGGGATGGTCGGATGGATTGTGATCATCTATGAGATCTTCGCCGGAGAAGCTGGGAAAGCTGCGGGTAATGCCTCAGAGTCTGTTCAGTCAGCATACAATGCGATGCGTTGGATTGTGCTAGTC LITVPLLMIEFFLILRAVGASVGAGSFVRLLVGTLVMLVFGYAGEAGLMDYTLGFVLGMVGWIVIIYEIFAGEAGKAAGNASESVQSAYNAMRWIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACCGTGCCGCTCTTAATGATTGAATTCTTCCTTATTTTGCGCGCA---------GTCGGTGCATCAGTCGGAGCA---GGCTCG------------------------------------TTCGTGCGG---CTGTTAGTCGGTACTTTAGTCATGCTTGTGTTCGGTTACGCGGGTGAA---------GCT------------------GGG------TTG---------------------------------ATG------------------------------------------------------------------GATTAC------------------ACGTTGGGA---TTCGTCCTAGGGATGGTCGGATGGATTGTGATCATCTATGAGATC---------------TTC------GCC---GGAGAAGCTGGGAAAGCT---GCGGGT------AAT---GCCTCAGAGTCTGTT---CAG---TCA---GCA---TAC---AAT---GCGATG---CGTTGGATTGTGCTAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFLILRA---VGASVGA-GS------------FVR-LLVGTLVMLVFGYAGE---A------G--L-----------M----------------------DY------TLG-FVLGMVGWIVIIYEI-----F--A-GEAGKA-AG--N-ASESV-Q-S-A-Y-N-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ929094 [unk-Proteo1-b] PRGD_OTU075_0f8025d60d23c2dba55498cb7d89a058 gb|KJ929094| PRGD_OTU075_0f8025d60d23c2dba55498cb7d89a058, putative proteorhodopsin gene, partial cds. PRGD_OTU075_0f8025d60d23c2dba55498cb7d89a058, putative proteorhodopsin gene, partial cds. KJ929094 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) TTGATTACCGTACCGCTCTTAATGATCGAATTCTTCCTCATATTGCGCGCAGTCGGTGCATCAGTGGGAGCAGGCTCGTTCGTGCGGCTGTTAGTCGGTACTTTAGTCATGCTTGTGTTCGGCTACGCGGGTGAAGCTGGGTTGATGGATTACACGTTGGGATTCATCCTAGGGATGGTTGGATGGATTGTGATCATCTATGAGATCTTCGCCGGAGAAGCTGGGAAAGCTGCCGGTAATGCCTCAGAGTCTGTTCAGTCAGCATACAATGCGATGCGTTGGATTGTGTTAGTT LITVPLLMIEFFLILRAVGASVGAGSFVRLLVGTLVMLVFGYAGEAGLMDYTLGFILGMVGWIVIIYEIFAGEAGKAAGNASESVQSAYNAMRWIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACCGTACCGCTCTTAATGATCGAATTCTTCCTCATATTGCGCGCA---------GTCGGTGCATCAGTGGGAGCA---GGCTCG------------------------------------TTCGTGCGG---CTGTTAGTCGGTACTTTAGTCATGCTTGTGTTCGGCTACGCGGGTGAA---------GCT------------------GGG------TTG---------------------------------ATG------------------------------------------------------------------GATTAC------------------ACGTTGGGA---TTCATCCTAGGGATGGTTGGATGGATTGTGATCATCTATGAGATC---------------TTC------GCC---GGAGAAGCTGGGAAAGCT---GCCGGT------AAT---GCCTCAGAGTCTGTT---CAG---TCA---GCA---TAC---AAT---GCGATG---CGTTGGATTGTGTTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFLILRA---VGASVGA-GS------------FVR-LLVGTLVMLVFGYAGE---A------G--L-----------M----------------------DY------TLG-FILGMVGWIVIIYEI-----F--A-GEAGKA-AG--N-ASESV-Q-S-A-Y-N-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ929097 [unk-Proteo1-b] PRGD_OTU075_66574ea195745450f33096622956459d gb|KJ929097| PRGD_OTU075_66574ea195745450f33096622956459d, putative proteorhodopsin gene, partial cds. PRGD_OTU075_66574ea195745450f33096622956459d, putative proteorhodopsin gene, partial cds. KJ929097 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTGATTACTGTTCCGCTCCTGATGATCGAATTCTTCCTTATTCTTCGCGCAGTCGGCGGAGCAGTAGGGGCTGGCTCGTTCATGCGGCTGTTAGTCGGCACACTAGTGATGCTTGTTTTCGGCTACGCGGGTGAGGCCGGATTGATGGATTATTGGCTTGGGTTCATCCTCGGGATGGTCGGATGGGCTGTGATCATCTACGAGATCTTCGCCGGCGAAGCTGGGAAGGCAGCGGCGAGCGCCTCAGAGGCTGTTCAATCCGCATACAGCGCGATGCGTTGGATCGTATTGATT LITVPLLMIEFFLILRAVGGAVGAGSFMRLLVGTLVMLVFGYAGEAGLMDYWLGFILGMVGWAVIIYEIFAGEAGKAAASASEAVQSAYSAMRWIVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTTCCGCTCCTGATGATCGAATTCTTCCTTATTCTTCGCGCA---------GTCGGCGGAGCAGTAGGGGCT---GGCTCG------------------------------------TTCATGCGG---CTGTTAGTCGGCACACTAGTGATGCTTGTTTTCGGCTACGCGGGTGAG---------GCC------------------GGA------TTG---------------------------------ATG------------------------------------------------------------------GATTAT------------------TGGCTTGGG---TTCATCCTCGGGATGGTCGGATGGGCTGTGATCATCTACGAGATC---------------TTC------GCC---GGCGAAGCTGGGAAGGCA---GCGGCG------AGC---GCCTCAGAGGCTGTT---CAA---TCC---GCA---TAC---AGC---GCGATG---CGTTGGATCGTATTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFLILRA---VGGAVGA-GS------------FMR-LLVGTLVMLVFGYAGE---A------G--L-----------M----------------------DY------WLG-FILGMVGWAVIIYEI-----F--A-GEAGKA-AA--S-ASEAV-Q-S-A-Y-S-AM-RWIVLI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ929100 [unk-Proteo1-b] PRGD_OTU075_b2489191236b2a561aada9d293345c52 gb|KJ929100| PRGD_OTU075_b2489191236b2a561aada9d293345c52, putative proteorhodopsin gene, partial cds. PRGD_OTU075_b2489191236b2a561aada9d293345c52, putative proteorhodopsin gene, partial cds. KJ929100 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATTACCGTTCCGCTTCTAATGATCGAATTCTTCCTTATTCTCCGCGCTGTCGGCGGAGCAGTAGGGGCTGGCTCGTTCATGCGGCTGTTAGTCGGCACACTAGTGATGCTTGTTTTCGGCTACGCGGGTGAGGCCGGATTGATGGATTATTGGCTTGGGTTCATCCTCGGGATGGTCGGATGGGCTGTGATCATCTACGAGATCTTTGCCGGCGAAGCTGGGAAGGCAGCGGCGAGCGCCTCAGAGGCTGTTCAATCCGCATACAGCGCGATGCGTTGGATCGTATTGATT LITVPLLMIEFFLILRAVGGAVGAGSFMRLLVGTLVMLVFGYAGEAGLMDYWLGFILGMVGWAVIIYEIFAGEAGKAAASASEAVQSAYSAMRWIVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACCGTTCCGCTTCTAATGATCGAATTCTTCCTTATTCTCCGCGCT---------GTCGGCGGAGCAGTAGGGGCT---GGCTCG------------------------------------TTCATGCGG---CTGTTAGTCGGCACACTAGTGATGCTTGTTTTCGGCTACGCGGGTGAG---------GCC------------------GGA------TTG---------------------------------ATG------------------------------------------------------------------GATTAT------------------TGGCTTGGG---TTCATCCTCGGGATGGTCGGATGGGCTGTGATCATCTACGAGATC---------------TTT------GCC---GGCGAAGCTGGGAAGGCA---GCGGCG------AGC---GCCTCAGAGGCTGTT---CAA---TCC---GCA---TAC---AGC---GCGATG---CGTTGGATCGTATTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFLILRA---VGGAVGA-GS------------FMR-LLVGTLVMLVFGYAGE---A------G--L-----------M----------------------DY------WLG-FILGMVGWAVIIYEI-----F--A-GEAGKA-AA--S-ASEAV-Q-S-A-Y-S-AM-RWIVLI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ929093 [unk-Proteo1-b] PRGD_OTU075_otuREP_7dd771275e1101afafc77ab91bb15f50 gb|KJ929093| PRGD_OTU075_otuREP_7dd771275e1101afafc77ab91bb15f50, putative proteorhodopsin gene, partial cds. PRGD_OTU075_otuREP_7dd771275e1101afafc77ab91bb15f50, putative proteorhodopsin gene, partial cds. KJ929093 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) TTGATTACTGTTCCGCTCCTAATGATCGAATTCTTCCTTATTCTTCGCGCAGTCGGCGGAGCAGTAGGGGCTGGCTCGTTCATGCGGCTGTTAGTCGGCACACTAGTGATGCTTGTTTTCGGCTACGCGGGTGAGGCCGGATTGATGGATTATTGGCTTGGGTTCATCCTCGGGATGGTCGGATGGGCTGTGATCATCTACGAGATCTTCGCCGGTGAAGCTGGTAAGGCAGCGGCGAGTGCCTCAGAGGCTGTTCAATCCGCATACAGCGCGATGCGTTGGATCGTATTGATT LITVPLLMIEFFLILRAVGGAVGAGSFMRLLVGTLVMLVFGYAGEAGLMDYWLGFILGMVGWAVIIYEIFAGEAGKAAASASEAVQSAYSAMRWIVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTTCCGCTCCTAATGATCGAATTCTTCCTTATTCTTCGCGCA---------GTCGGCGGAGCAGTAGGGGCT---GGCTCG------------------------------------TTCATGCGG---CTGTTAGTCGGCACACTAGTGATGCTTGTTTTCGGCTACGCGGGTGAG---------GCC------------------GGA------TTG---------------------------------ATG------------------------------------------------------------------GATTAT------------------TGGCTTGGG---TTCATCCTCGGGATGGTCGGATGGGCTGTGATCATCTACGAGATC---------------TTC------GCC---GGTGAAGCTGGTAAGGCA---GCGGCG------AGT---GCCTCAGAGGCTGTT---CAA---TCC---GCA---TAC---AGC---GCGATG---CGTTGGATCGTATTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFLILRA---VGGAVGA-GS------------FMR-LLVGTLVMLVFGYAGE---A------G--L-----------M----------------------DY------WLG-FILGMVGWAVIIYEI-----F--A-GEAGKA-AA--S-ASEAV-Q-S-A-Y-S-AM-RWIVLI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ929788 [unk-Proteo1-b] PRGD_OTU246_otuREP_cb4abac4d993e4b01f0c04f7e8275aba gb|KJ929788| PRGD_OTU246_otuREP_cb4abac4d993e4b01f0c04f7e8275aba, putative proteorhodopsin gene, partial cds. PRGD_OTU246_otuREP_cb4abac4d993e4b01f0c04f7e8275aba, putative proteorhodopsin gene, partial cds. KJ929788 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTGATTACCGTGCCGCTCTTAATGATTGAATTCTTCCTCATTTTGCGCGCAGTCGGTGCAGCAGTAGGGGCAGGCTCGTTCTTGCGACTGCTGGGTGGTACCCTGATCATGCTTATTTTTGGGTACGCTGGTGAAGCTGGTTTGATGGATTACTGGCTCGGATTCATCCTCGGGTTGGTCGGATGGGTGATAATTGTCTGGGAGATCATTGGCGGCGAAGCTGGAAAAGCCGCGGGCAATGCCTCAGAGTCCGTGCAATCGGCGTTCAAAGCGATGCGCTTGATTGTAGTGATT LITVPLLMIEFFLILRAVGAAVGAGSFLRLLGGTLIMLIFGYAGEAGLMDYWLGFILGLVGWVIIVWEIIGGEAGKAAGNASESVQSAFKAMRLIVVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACCGTGCCGCTCTTAATGATTGAATTCTTCCTCATTTTGCGCGCA---------GTCGGTGCAGCAGTAGGGGCA---GGCTCG------------------------------------TTCTTGCGA---CTGCTGGGTGGTACCCTGATCATGCTTATTTTTGGGTACGCTGGTGAA---------GCT------------------GGT------TTG---------------------------------ATG------------------------------------------------------------------GATTAC------------------TGGCTCGGA---TTCATCCTCGGGTTGGTCGGATGGGTGATAATTGTCTGGGAGATC---------------ATT------GGC---GGCGAAGCTGGAAAAGCC---GCGGGC------AAT---GCCTCAGAGTCCGTG---CAA---TCG---GCG---TTC---AAA---GCGATG---CGCTTGATTGTAGTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFLILRA---VGAAVGA-GS------------FLR-LLGGTLIMLIFGYAGE---A------G--L-----------M----------------------DY------WLG-FILGLVGWVIIVWEI-----I--G-GEAGKA-AG--N-ASESV-Q-S-A-F-K-AM-RLIVVI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ929789 [unk-Proteo1-b] PRGD_OTU246_fb1d83513b4eab9fd8c38a1a9f28d323 gb|KJ929789| PRGD_OTU246_fb1d83513b4eab9fd8c38a1a9f28d323, putative proteorhodopsin gene, partial cds. PRGD_OTU246_fb1d83513b4eab9fd8c38a1a9f28d323, putative proteorhodopsin gene, partial cds. KJ929789 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAATTACTGTACCGCTCTTAATGATCGAATTCTTCCTCATTTTGCGCGCAGTCGGTGCAGCAGTAGGGGCAGGATCGTTCTTGCGACTGCTGGGTGGTACCTTGATAATGCTTATTTTCGGGTACGCGGGTGAAGCCGGTTTAATGGGTTACTGGGCCGGATTTGGTCTCGGGATGATTGGATGGTTGATAATTGTCTGGGAGATCATTGGCGGAGAGGCTGGAAAAGCCGCGGGCAATGCCTCAGAGTCGGTGCAGTCAGCGTTCAAAGCGATGCGCTTGATTGTAGTGATT LITVPLLMIEFFLILRAVGAAVGAGSFLRLLGGTLIMLIFGYAGEAGLMGYWAGFGLGMIGWLIIVWEIIGGEAGKAAGNASESVQSAFKAMRLIVVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCGCTCTTAATGATCGAATTCTTCCTCATTTTGCGCGCA---------GTCGGTGCAGCAGTAGGGGCA---GGATCG------------------------------------TTCTTGCGA---CTGCTGGGTGGTACCTTGATAATGCTTATTTTCGGGTACGCGGGTGAA---------GCC------------------GGT------TTA---------------------------------ATG------------------------------------------------------------------GGTTAC------------------TGGGCCGGA---TTTGGTCTCGGGATGATTGGATGGTTGATAATTGTCTGGGAGATC---------------ATT------GGC---GGAGAGGCTGGAAAAGCC---GCGGGC------AAT---GCCTCAGAGTCGGTG---CAG---TCA---GCG---TTC---AAA---GCGATG---CGCTTGATTGTAGTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFLILRA---VGAAVGA-GS------------FLR-LLGGTLIMLIFGYAGE---A------G--L-----------M----------------------GY------WAG-FGLGMIGWLIIVWEI-----I--G-GEAGKA-AG--N-ASESV-Q-S-A-F-K-AM-RLIVVI-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ929096 [unk-Proteo1-b] PRGD_OTU075_53154c7026056f662bed69ed34304749 gb|KJ929096| PRGD_OTU075_53154c7026056f662bed69ed34304749, putative proteorhodopsin gene, partial cds. PRGD_OTU075_53154c7026056f662bed69ed34304749, putative proteorhodopsin gene, partial cds. KJ929096 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACGGTACCGCTCCTGATGATCGAATTCTTCATCATATTGCGTGCGGTAGGTGGAGCAGTAGGCGCAGGTTCTTTCATGCGGCTATTGGTCGGTACGCTAGTCATGCTCGTGTTCGGCTATGCAGGCGAAGCGGGTCTGATGGACTACTGGGTCGGTTTCGGCCTTGGAATGATTGGATGGGTTGTAATCATCTATGAAATCTACGGCGGTGAAGCTGGAAAGGCCGCTGCTGCCTCTTCGGAGTCCGTACAGTCAGCATTTAACGCCATGCGATGGATCGTGTTAGTG LITVPLLMIEFFIILRAVGGAVGAGSFMRLLVGTLVMLVFGYAGEAGLMDYWVGFGLGMIGWVVIIYEIYGGEAGKAAAASSESVQSAFNAMRWIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACGGTACCGCTCCTGATGATCGAATTCTTCATCATATTGCGTGCG---------GTAGGTGGAGCAGTAGGCGCA---GGTTCT------------------------------------TTCATGCGG---CTATTGGTCGGTACGCTAGTCATGCTCGTGTTCGGCTATGCAGGCGAA---------GCG------------------GGT------CTG---------------------------------ATG------------------------------------------------------------------GACTAC------------------TGGGTCGGT---TTCGGCCTTGGAATGATTGGATGGGTTGTAATCATCTATGAAATC---------------TAC------GGC---GGTGAAGCTGGAAAGGCC---GCTGCT------GCC---TCTTCGGAGTCCGTA---CAG---TCA---GCA---TTT---AAC---GCCATG---CGATGGATCGTGTTAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILRA---VGGAVGA-GS------------FMR-LLVGTLVMLVFGYAGE---A------G--L-----------M----------------------DY------WVG-FGLGMIGWVVIIYEI-----Y--G-GEAGKA-AA--A-SSESV-Q-S-A-F-N-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ929103 [unk-Proteo1-b] PRGD_OTU075_fd7e8201113490eca4aed436a0c81b2f gb|KJ929103| PRGD_OTU075_fd7e8201113490eca4aed436a0c81b2f, putative proteorhodopsin gene, partial cds. PRGD_OTU075_fd7e8201113490eca4aed436a0c81b2f, putative proteorhodopsin gene, partial cds. KJ929103 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACGGTACCGCTCCTGATGATCGAATTCTTCATCATTTTGCGGGCGGTAGGTGGAGCAGTAGGCGCAGGTTCTTTCATGCGGCTATTGGTCGGTACGCTAGTCATGCTCGTGTTCGGCTATGCAGGCGAAGCGGGTCTGATGGACTACTGGGTAGGTTTCGGTCTTGGAATGATTGGATGGGCGGTTATCATCTATGAAATCTACGGCGGTGAAGCTGGAAAGGCCGCTGCTGCCTCTTCGGAGTCCGTACAGTCAGCATTTAACGCCATGCGATGGATCGTGTTAGTG LITVPLLMIEFFIILRAVGGAVGAGSFMRLLVGTLVMLVFGYAGEAGLMDYWVGFGLGMIGWAVIIYEIYGGEAGKAAAASSESVQSAFNAMRWIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACGGTACCGCTCCTGATGATCGAATTCTTCATCATTTTGCGGGCG---------GTAGGTGGAGCAGTAGGCGCA---GGTTCT------------------------------------TTCATGCGG---CTATTGGTCGGTACGCTAGTCATGCTCGTGTTCGGCTATGCAGGCGAA---------GCG------------------GGT------CTG---------------------------------ATG------------------------------------------------------------------GACTAC------------------TGGGTAGGT---TTCGGTCTTGGAATGATTGGATGGGCGGTTATCATCTATGAAATC---------------TAC------GGC---GGTGAAGCTGGAAAGGCC---GCTGCT------GCC---TCTTCGGAGTCCGTA---CAG---TCA---GCA---TTT---AAC---GCCATG---CGATGGATCGTGTTAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILRA---VGGAVGA-GS------------FMR-LLVGTLVMLVFGYAGE---A------G--L-----------M----------------------DY------WVG-FGLGMIGWAVIIYEI-----Y--G-GEAGKA-AA--A-SSESV-Q-S-A-F-N-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ929102 [unk-Proteo1-b] PRGD_OTU075_dd9bb2c1879dfb470be545e046e5e75c gb|KJ929102| PRGD_OTU075_dd9bb2c1879dfb470be545e046e5e75c, putative proteorhodopsin gene, partial cds. PRGD_OTU075_dd9bb2c1879dfb470be545e046e5e75c, putative proteorhodopsin gene, partial cds. KJ929102 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTGATCACGGTACCGCTTCTGATGATCGAATTCTTCATCATTTTGCGTGCGGTGGGTGGAGCAGTAGGCGCAGGTTCTTTCATGCGGCTATTGGTCGGTACGCTAGTCATGCTCGTGTTCGGCTATGCAGGTGAAGCGGGCCTGATGGACTACTGGGTAGGTTTCGGTCTTGGAATGATTGGATGGGTGGTAATCATCTATGAAATCTACGGCGGTGAAGCTGGAAAGGCCGCTGCTGCCTCTTCGGAGTCCGTGCAGTCAGCATTTAACGCCATGCGTTGGATCGTGTTAGTG LITVPLLMIEFFIILRAVGGAVGAGSFMRLLVGTLVMLVFGYAGEAGLMDYWVGFGLGMIGWVVIIYEIYGGEAGKAAAASSESVQSAFNAMRWIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACGGTACCGCTTCTGATGATCGAATTCTTCATCATTTTGCGTGCG---------GTGGGTGGAGCAGTAGGCGCA---GGTTCT------------------------------------TTCATGCGG---CTATTGGTCGGTACGCTAGTCATGCTCGTGTTCGGCTATGCAGGTGAA---------GCG------------------GGC------CTG---------------------------------ATG------------------------------------------------------------------GACTAC------------------TGGGTAGGT---TTCGGTCTTGGAATGATTGGATGGGTGGTAATCATCTATGAAATC---------------TAC------GGC---GGTGAAGCTGGAAAGGCC---GCTGCT------GCC---TCTTCGGAGTCCGTG---CAG---TCA---GCA---TTT---AAC---GCCATG---CGTTGGATCGTGTTAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILRA---VGGAVGA-GS------------FMR-LLVGTLVMLVFGYAGE---A------G--L-----------M----------------------DY------WVG-FGLGMIGWVVIIYEI-----Y--G-GEAGKA-AA--A-SSESV-Q-S-A-F-N-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ929095 [unk-Proteo1-b] PRGD_OTU075_3cc90322621fb53b2f0b319831ec1c95 gb|KJ929095| PRGD_OTU075_3cc90322621fb53b2f0b319831ec1c95, putative proteorhodopsin gene, partial cds. PRGD_OTU075_3cc90322621fb53b2f0b319831ec1c95, putative proteorhodopsin gene, partial cds. KJ929095 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTGATCACCGTACCGCTTCTGATGATCGAATTCTTCATCATTTTGCGCGCGGTGGGTGGTGCAGTAGGTGCAGGTTCCTTCATGCGACTATTGGTCGGCACGCTGTTCATGCTTGTGTTCGGCTATGCAGGTGAAGCTGGTTTGATGGGCTACTGGTTAGGGTTCGGTCTTGGAATGATTGGATGGTTTGTAATCATCTATGAAATCTACGGCGGTGAAGCTGGAAAGGCCGCTGCTGCCTCCTCGGAGTCCGTGCAGTCCGCATTTAACGCCATGCGATGGATCGTGTTAGTG LITVPLLMIEFFIILRAVGGAVGAGSFMRLLVGTLFMLVFGYAGEAGLMGYWLGFGLGMIGWFVIIYEIYGGEAGKAAAASSESVQSAFNAMRWIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTACCGCTTCTGATGATCGAATTCTTCATCATTTTGCGCGCG---------GTGGGTGGTGCAGTAGGTGCA---GGTTCC------------------------------------TTCATGCGA---CTATTGGTCGGCACGCTGTTCATGCTTGTGTTCGGCTATGCAGGTGAA---------GCT------------------GGT------TTG---------------------------------ATG------------------------------------------------------------------GGCTAC------------------TGGTTAGGG---TTCGGTCTTGGAATGATTGGATGGTTTGTAATCATCTATGAAATC---------------TAC------GGC---GGTGAAGCTGGAAAGGCC---GCTGCT------GCC---TCCTCGGAGTCCGTG---CAG---TCC---GCA---TTT---AAC---GCCATG---CGATGGATCGTGTTAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILRA---VGGAVGA-GS------------FMR-LLVGTLFMLVFGYAGE---A------G--L-----------M----------------------GY------WLG-FGLGMIGWFVIIYEI-----Y--G-GEAGKA-AA--A-SSESV-Q-S-A-F-N-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ929645 [unk-Proteo1-b] PRGD_OTU180_036bd1744d6ad460e651185b55af2aa4 gb|KJ929645| PRGD_OTU180_036bd1744d6ad460e651185b55af2aa4, putative proteorhodopsin gene, partial cds. PRGD_OTU180_036bd1744d6ad460e651185b55af2aa4, putative proteorhodopsin gene, partial cds. KJ929645 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTAATTACAGTGCCGCTGCAGATGATCGAATTTTTCATCATTCTACGCGCGGCAGGCAGTGCTGTCGGATCTGGTTCATTCTTGAGACTGTTGTTCGGCACGTTGTTTATGCTGATATTCGGTTACGCCGGTGAAGCCGGGCTCATGGACTACTGGCTTGGATTCATACTCGGTATGATTGGATGGGCCGTGATCATCTATGAAATCTTCGGTGGAGAGGCTGGAAAGGCCGCCGCTAGCGCCTCGGAGTCAGTGCGATCGGCGTTCAGTGCAATGCGTTGGATTGTACTAGTT LITVPLQMIEFFIILRAAGSAVGSGSFLRLLFGTLFMLIFGYAGEAGLMDYWLGFILGMIGWAVIIYEIFGGEAGKAAASASESVRSAFSAMRWIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCGCTGCAGATGATCGAATTTTTCATCATTCTACGCGCG---------GCAGGCAGTGCTGTCGGATCT---GGTTCA------------------------------------TTCTTGAGA---CTGTTGTTCGGCACGTTGTTTATGCTGATATTCGGTTACGCCGGTGAA---------GCC------------------GGG------CTC---------------------------------ATG------------------------------------------------------------------GACTAC------------------TGGCTTGGA---TTCATACTCGGTATGATTGGATGGGCCGTGATCATCTATGAAATC---------------TTC------GGT---GGAGAGGCTGGAAAGGCC---GCCGCT------AGC---GCCTCGGAGTCAGTG---CGA---TCG---GCG---TTC---AGT---GCAATG---CGTTGGATTGTACTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFFIILRA---AGSAVGS-GS------------FLR-LLFGTLFMLIFGYAGE---A------G--L-----------M----------------------DY------WLG-FILGMIGWAVIIYEI-----F--G-GEAGKA-AA--S-ASESV-R-S-A-F-S-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ929644 [unk-Proteo1-b] PRGD_OTU180_otuREP_a0b425fefc59e4e0533256aa449562ac gb|KJ929644| PRGD_OTU180_otuREP_a0b425fefc59e4e0533256aa449562ac, putative proteorhodopsin gene, partial cds. PRGD_OTU180_otuREP_a0b425fefc59e4e0533256aa449562ac, putative proteorhodopsin gene, partial cds. KJ929644 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATTACAGTGCCGCTGCAGATGATCGAATTTTTCATCATTCTACGCGCAGCAGGCAGCGCGGTCGGATCTGGTTCATTCGTGAGACTGTTGTTCGGCACGTTGTTTATGCTGATATTCGGTTACGCCGGTGAAGCCGGGCTCATGGACTACTGGCTTGGATTCATACTCGGTATGATTGGATGGGCCGTGATCATCTATGAAATCTTCGGTGGAGAGGCTGGAAAGGCCGCCGCTAGCGCCTCGGAGTCAGTGCGATCGGCGTTCAGTGCAATGCGATGGATTGTACTAGTT LITVPLQMIEFFIILRAAGSAVGSGSFVRLLFGTLFMLIFGYAGEAGLMDYWLGFILGMIGWAVIIYEIFGGEAGKAAASASESVRSAFSAMRWIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCGCTGCAGATGATCGAATTTTTCATCATTCTACGCGCA---------GCAGGCAGCGCGGTCGGATCT---GGTTCA------------------------------------TTCGTGAGA---CTGTTGTTCGGCACGTTGTTTATGCTGATATTCGGTTACGCCGGTGAA---------GCC------------------GGG------CTC---------------------------------ATG------------------------------------------------------------------GACTAC------------------TGGCTTGGA---TTCATACTCGGTATGATTGGATGGGCCGTGATCATCTATGAAATC---------------TTC------GGT---GGAGAGGCTGGAAAGGCC---GCCGCT------AGC---GCCTCGGAGTCAGTG---CGA---TCG---GCG---TTC---AGT---GCAATG---CGATGGATTGTACTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFFIILRA---AGSAVGS-GS------------FVR-LLFGTLFMLIFGYAGE---A------G--L-----------M----------------------DY------WLG-FILGMIGWAVIIYEI-----F--G-GEAGKA-AA--S-ASESV-R-S-A-F-S-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ929646 [unk-Proteo1-b] PRGD_OTU180_21a619b362f34a4abc5ae7eb8903c19c gb|KJ929646| PRGD_OTU180_21a619b362f34a4abc5ae7eb8903c19c, putative proteorhodopsin gene, partial cds. PRGD_OTU180_21a619b362f34a4abc5ae7eb8903c19c, putative proteorhodopsin gene, partial cds. KJ929646 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAATCACAGTGCCGTTACAGATGATCGAATTTTTCATCATCCTACGTGCAGCAGGCAGCGTTGTTGGATCTGGTTCATTTATGAGGCTGTTGTTCGGCACGTTGTTCATGCTGATATTCGGTTACGCCGGTGAAGCGGGTCTCATGAACTACTGGCTTGGATTCGGACTCGGTATGCTCGGATGGGCTGTGATCATCTACGAAATCTTTGGTGGAGAGGCTGGAAAGGCAGCCGCTAGCGCCTCGGAGTCAGTTAGATCGGCGTTCAGCGCTATGCGATGGATCGTACTGGTT LITVPLQMIEFFIILRAAGSVVGSGSFMRLLFGTLFMLIFGYAGEAGLMNYWLGFGLGMLGWAVIIYEIFGGEAGKAAASASESVRSAFSAMRWIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTGCCGTTACAGATGATCGAATTTTTCATCATCCTACGTGCA---------GCAGGCAGCGTTGTTGGATCT---GGTTCA------------------------------------TTTATGAGG---CTGTTGTTCGGCACGTTGTTCATGCTGATATTCGGTTACGCCGGTGAA---------GCG------------------GGT------CTC---------------------------------ATG------------------------------------------------------------------AACTAC------------------TGGCTTGGA---TTCGGACTCGGTATGCTCGGATGGGCTGTGATCATCTACGAAATC---------------TTT------GGT---GGAGAGGCTGGAAAGGCA---GCCGCT------AGC---GCCTCGGAGTCAGTT---AGA---TCG---GCG---TTC---AGC---GCTATG---CGATGGATCGTACTGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFFIILRA---AGSVVGS-GS------------FMR-LLFGTLFMLIFGYAGE---A------G--L-----------M----------------------NY------WLG-FGLGMLGWAVIIYEI-----F--G-GEAGKA-AA--S-ASESV-R-S-A-F-S-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ929808 [unk-Proteo1-b] PRGD_OTU259_otuREP_351dc2d435e3aef1b2a848269fa5d349 gb|KJ929808| PRGD_OTU259_otuREP_351dc2d435e3aef1b2a848269fa5d349, putative proteorhodopsin gene, partial cds. PRGD_OTU259_otuREP_351dc2d435e3aef1b2a848269fa5d349, putative proteorhodopsin gene, partial cds. KJ929808 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATTACCGTTCCGCTGCTGATGATCGAGTTTTACATCATACTGCGAGCGACAGGCGCCACAATCGGCAACGGCTCGTTCGTGAGACTCTTAGCGGGTACGCTTGTCATGCTGATCTTCGGCTACCTTGGTGAAGCGGGCGTGATGAACGTCACACTTGGATTCGTACTGGGAATGATTGGTTGGGCAGTCATCATTTACGAAATCTATGGCGGTGAAGCCGGTAAGGCGGCGGCGGCGGCTGATGCACCTGTGCAATCAGCTTTCTCGGCGATGCGCTGGATCGTTTTAGTC LITVPLLMIEFYIILRATGATIGNGSFVRLLAGTLVMLIFGYLGEAGVMNVTLGFVLGMIGWAVIIYEIYGGEAGKAAAAADAPVQSAFSAMRWIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACCGTTCCGCTGCTGATGATCGAGTTTTACATCATACTGCGAGCG---------ACAGGCGCCACAATCGGCAAC---GGCTCG------------------------------------TTCGTGAGA---CTCTTAGCGGGTACGCTTGTCATGCTGATCTTCGGCTACCTTGGTGAA---------GCG------------------GGC------GTG---------------------------------ATG------------------------------------------------------------------AACGTC------------------ACACTTGGA---TTCGTACTGGGAATGATTGGTTGGGCAGTCATCATTTACGAAATC---------------TAT------GGC---GGTGAAGCCGGTAAGGCG---GCGGCG------GCG---GCTGATGCACCTGTG---CAA---TCA---GCT---TTC---TCG---GCGATG---CGCTGGATCGTTTTAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYIILRA---TGATIGN-GS------------FVR-LLAGTLVMLIFGYLGE---A------G--V-----------M----------------------NV------TLG-FVLGMIGWAVIIYEI-----Y--G-GEAGKA-AA--A-ADAPV-Q-S-A-F-S-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-b]_KJ929925 [unk-Proteo1-b] PRGD_OTU376_otuREP_8f9ddfede161c687c823f24397b456ce gb|KJ929925| PRGD_OTU376_otuREP_8f9ddfede161c687c823f24397b456ce, putative proteorhodopsin gene, partial cds. PRGD_OTU376_otuREP_8f9ddfede161c687c823f24397b456ce, putative proteorhodopsin gene, partial cds. KJ929925 [[proteorhodopsin/Proteobacterial-like cluster 1/B subcluster]] proteorhodopsin Proteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTGATCACTGTTCCCTTGTTGATGATTGAGTTCTTTATCATTTTGCGCGCTGTTGGTGCGTCAGTGGGAACCGGATCTTTCTTGCGATTACTTGTGGGTACGCTGGTTATGTTGATTTTCGGTTATGCCGGTGAAGTTAACATGATGAACGCGACTCTAGGATTCGCGCTGGGAATGGTTGGTTGGGCCATTATCATTTACGAGATTTATGGTGGTGAGGCGGGCAAAGCCGCGGCCAGCGCAACTGGCCCCGTGCAGTCAGCATTCAACGCAATGCGTTGGATTGTGCTTGTG LITVPLLMIEFFIILRAVGASVGTGSFLRLLVGTLVMLIFGYAGEVNMMNATLGFALGMVGWAIIIYEIYGGEAGKAAASATGPVQSAFNAMRWIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTTCCCTTGTTGATGATTGAGTTCTTTATCATTTTGCGCGCT---------GTTGGTGCGTCAGTGGGAACC---GGATCT------------------------------------TTCTTGCGA---TTACTTGTGGGTACGCTGGTTATGTTGATTTTCGGTTATGCCGGTGAA---------GTT------------------AAC------ATG---------------------------------ATG------------------------------------------------------------------AACGCG------------------ACTCTAGGA---TTCGCGCTGGGAATGGTTGGTTGGGCCATTATCATTTACGAGATT---------------TAT------GGT---GGTGAGGCGGGCAAAGCC---GCGGCC------AGC---GCAACTGGCCCCGTG---CAG---TCA---GCA---TTC---AAC---GCAATG---CGTTGGATTGTGCTTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILRA---VGASVGT-GS------------FLR-LLVGTLVMLIFGYAGE---V------N--M-----------M----------------------NA------TLG-FALGMVGWAIIIYEI-----Y--G-GEAGKA-AA--S-ATGPV-Q-S-A-F-N-AM-RWIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-EB0_35D03]_KJ927673 [unk-Proteo1-EB0_35D03] PRGD_OTU014_1cb7e5e6df6a21f68e14f40097e641a9 gb|KJ927673| PRGD_OTU014_1cb7e5e6df6a21f68e14f40097e641a9, putative proteorhodopsin gene, partial cds. PRGD_OTU014_1cb7e5e6df6a21f68e14f40097e641a9, putative proteorhodopsin gene, partial cds. KJ927673 [[proteorhodopsin/Proteobacterial-like cluster 1/EB0_35D03-like subcluster]] proteorhodopsin Proteobacterial-like cluster 1 EB0_35D03-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) TTAATCACTGTACCTTTATTAATGATTGAATTCTTCATTATTCTTAAAGCAGTTGGTGCCAGCATCTCAACAAACTCTTTCTGGAGACTGCTAGTTGGTACTCTGGTTATGCTTATCGGTGGATTTGCAGGTGAGGCAATGCTAATCTCGGCTTCCCTAGGATTTATTATAGGAATGGTAGGTTGGGCAATCATCATCTGGGAAATCTTCGGTGGTGAAGCAAGTAAGGCTGCAGATGCTAATGCAGGAGTTAAATCTGCCTTCAACGCACTAAGACTTATTGTTTTAGTT LITVPLLMIEFFIILKAVGASISTNSFWRLLVGTLVMLIGGFAGEAMLISASLGFIIGMVGWAIIIWEIFGGEASKAADANAGVKSAFNALRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCTTTATTAATGATTGAATTCTTCATTATTCTTAAAGCA---------GTTGGTGCCAGCATCTCAACA---AACTCT------------------------------------TTCTGGAGA---CTGCTAGTTGGTACTCTGGTTATGCTTATCGGTGGATTTGCAGGTGAG---------GCA------------------ATG------CTA---------------------------------ATC------------------------------------------------------------------TCGGCT------------------TCCCTAGGA---TTTATTATAGGAATGGTAGGTTGGGCAATCATCATCTGGGAAATC---------------TTC------GGT---GGTGAAGCAAGTAAGGCTGCA------------GAT---GCTAATGCAGGAGTT---AAA---TCT---GCC---TTC---AAC---GCACTA---AGACTTATTGTTTTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGASIST-NS------------FWR-LLVGTLVMLIGGFAGE---A------M--L-----------I----------------------SA------SLG-FIIGMVGWAIIIWEI-----F--G-GEASKAA----D-ANAGV-K-S-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-EB0_35D03]_KJ927672 [unk-Proteo1-EB0_35D03] PRGD_OTU014_12fc84fb20edc3f046a11cb1e3e8fc08 gb|KJ927672| PRGD_OTU014_12fc84fb20edc3f046a11cb1e3e8fc08, putative proteorhodopsin gene, partial cds. PRGD_OTU014_12fc84fb20edc3f046a11cb1e3e8fc08, putative proteorhodopsin gene, partial cds. KJ927672 [[proteorhodopsin/Proteobacterial-like cluster 1/EB0_35D03-like subcluster]] proteorhodopsin Proteobacterial-like cluster 1 EB0_35D03-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683) TTAATCACTGTACCTTTATTAATGATTGAATTCTTCATTATTCTTAAAGCAGTTGGTGCCAGCATCTCAACAAACTCTTTCTGGAGACTGCTAGTTGGTACTCTGGTTATGCTTATTGGTGGATTTGCAGGTGAGGCAATGCTTATCTCGGCTTCCCTAGGATTTATTATAGGAATGGTAGGTTGGGCAATCATCATCTGGGAAATCTTCGGTGGTGAAGCAAGTAAGGCTGCAGATGCTAATGCAGGAGTTAAATCTGCCTTCAACGCACTAAGACTAATTGTTTTAGTT LITVPLLMIEFFIILKAVGASISTNSFWRLLVGTLVMLIGGFAGEAMLISASLGFIIGMVGWAIIIWEIFGGEASKAADANAGVKSAFNALRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCTTTATTAATGATTGAATTCTTCATTATTCTTAAAGCA---------GTTGGTGCCAGCATCTCAACA---AACTCT------------------------------------TTCTGGAGA---CTGCTAGTTGGTACTCTGGTTATGCTTATTGGTGGATTTGCAGGTGAG---------GCA------------------ATG------CTT---------------------------------ATC------------------------------------------------------------------TCGGCT------------------TCCCTAGGA---TTTATTATAGGAATGGTAGGTTGGGCAATCATCATCTGGGAAATC---------------TTC------GGT---GGTGAAGCAAGTAAGGCTGCA------------GAT---GCTAATGCAGGAGTT---AAA---TCT---GCC---TTC---AAC---GCACTA---AGACTAATTGTTTTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGASIST-NS------------FWR-LLVGTLVMLIGGFAGE---A------M--L-----------I----------------------SA------SLG-FIIGMVGWAIIIWEI-----F--G-GEASKAA----D-ANAGV-K-S-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-EB0_35D03]_KJ927675 [unk-Proteo1-EB0_35D03] PRGD_OTU014_74cffd6c63d078f25d8e5d95393c608e gb|KJ927675| PRGD_OTU014_74cffd6c63d078f25d8e5d95393c608e, putative proteorhodopsin gene, partial cds. PRGD_OTU014_74cffd6c63d078f25d8e5d95393c608e, putative proteorhodopsin gene, partial cds. KJ927675 [[proteorhodopsin/Proteobacterial-like cluster 1/EB0_35D03-like subcluster]] proteorhodopsin Proteobacterial-like cluster 1 EB0_35D03-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683) TTAATTACTGTACCTTTATTAATGATTGAATTCTTCATTATTCTTAAAGCAGTTGGTGCCAGCATCTCAACAAACTCTTTCTGGAGACTGTTAGTTGGTACTCTGGTTATGCTTATCGGTGGATTTGCAGGTGAAGCAATGTTGATCTCAGCTTCCCTAGGATTTATTATAGGAATGGTAGGTTGGGCAATCATCATCTGGGAAATCTTCGGTGGTGAAGCAAGTAAGGCTGCAGATGCTAATGCAGGAGTTAAATCTGCCTTCAACGCACTAAGACTTATTGTTTTAGTT LITVPLLMIEFFIILKAVGASISTNSFWRLLVGTLVMLIGGFAGEAMLISASLGFIIGMVGWAIIIWEIFGGEASKAADANAGVKSAFNALRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCTTTATTAATGATTGAATTCTTCATTATTCTTAAAGCA---------GTTGGTGCCAGCATCTCAACA---AACTCT------------------------------------TTCTGGAGA---CTGTTAGTTGGTACTCTGGTTATGCTTATCGGTGGATTTGCAGGTGAA---------GCA------------------ATG------TTG---------------------------------ATC------------------------------------------------------------------TCAGCT------------------TCCCTAGGA---TTTATTATAGGAATGGTAGGTTGGGCAATCATCATCTGGGAAATC---------------TTC------GGT---GGTGAAGCAAGTAAGGCTGCA------------GAT---GCTAATGCAGGAGTT---AAA---TCT---GCC---TTC---AAC---GCACTA---AGACTTATTGTTTTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGASIST-NS------------FWR-LLVGTLVMLIGGFAGE---A------M--L-----------I----------------------SA------SLG-FIIGMVGWAIIIWEI-----F--G-GEASKAA----D-ANAGV-K-S-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-EB0_35D03]_KJ927671 [unk-Proteo1-EB0_35D03] PRGD_OTU014_otuREP_b33018082e716081f9d2f137504ab5fb gb|KJ927671| PRGD_OTU014_otuREP_b33018082e716081f9d2f137504ab5fb, putative proteorhodopsin gene, partial cds. PRGD_OTU014_otuREP_b33018082e716081f9d2f137504ab5fb, putative proteorhodopsin gene, partial cds. KJ927671 [[proteorhodopsin/Proteobacterial-like cluster 1/EB0_35D03-like subcluster]] proteorhodopsin Proteobacterial-like cluster 1 EB0_35D03-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-14.48, 113.45) TTAATTACCGTACCTTTATTGATGATTGAATTCTTCATTATTCTTAAAGCAGTTGGTGCATCGATATCAACAAACTCTTTTTGGAGATTATTGGTTGGTACGCTAGTTATGCTTATCGGTGGATTTGCAGGTGAGGCAATGCTGATCTCGGCTTCCCTAGGATTTATCATAGGAATGGTAGGTTGGGCAATCATCATCTGGGAAATCTTCGGTGGAGAGGCTAGTAAAGCTGCTGATGCCAGTGCAGGAGTTAAATCTGCATTCAACGCACTGAGACTTATTGTTTTGGTT LITVPLLMIEFFIILKAVGASISTNSFWRLLVGTLVMLIGGFAGEAMLISASLGFIIGMVGWAIIIWEIFGGEASKAADASAGVKSAFNALRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACCGTACCTTTATTGATGATTGAATTCTTCATTATTCTTAAAGCA---------GTTGGTGCATCGATATCAACA---AACTCT------------------------------------TTTTGGAGA---TTATTGGTTGGTACGCTAGTTATGCTTATCGGTGGATTTGCAGGTGAG---------GCA------------------ATG------CTG---------------------------------ATC------------------------------------------------------------------TCGGCT------------------TCCCTAGGA---TTTATCATAGGAATGGTAGGTTGGGCAATCATCATCTGGGAAATC---------------TTC------GGT---GGAGAGGCTAGTAAAGCTGCT------------GAT---GCCAGTGCAGGAGTT---AAA---TCT---GCA---TTC---AAC---GCACTG---AGACTTATTGTTTTGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGASIST-NS------------FWR-LLVGTLVMLIGGFAGE---A------M--L-----------I----------------------SA------SLG-FIIGMVGWAIIIWEI-----F--G-GEASKAA----D-ASAGV-K-S-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-EB0_35D03]_KJ927679 [unk-Proteo1-EB0_35D03] PRGD_OTU014_d0517341c3213dd7969ee26103013bb0 gb|KJ927679| PRGD_OTU014_d0517341c3213dd7969ee26103013bb0, putative proteorhodopsin gene, partial cds. PRGD_OTU014_d0517341c3213dd7969ee26103013bb0, putative proteorhodopsin gene, partial cds. KJ927679 [[proteorhodopsin/Proteobacterial-like cluster 1/EB0_35D03-like subcluster]] proteorhodopsin Proteobacterial-like cluster 1 EB0_35D03-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), English Channel (48.7717, -3.9683) TTAATTACTGTGCCTTTATTAATGATTGAATTCTTCATCATTCTTAAAGCGGTAGGTGCAACAATTTCAACAAACTCTTTTTGGAGATTGTTGGGTGGTACGCTAGTTATGCTTATCGGTGGTTTTGCTGGTGAAGCAATGCTAATCTCTGCTTCCCTAGGATTTATCATAGGTATGGTAGGTTGGGCAATTATCATCTGGGAAATCTTTGGTGGTGAAGCTAGTAAAGCAGCTGAAGCGAATGAAGGTGTAAAAACTGCATTCAATGCACTAAGAATAATTGTATTAGTA LITVPLLMIEFFIILKAVGATISTNSFWRLLGGTLVMLIGGFAGEAMLISASLGFIIGMVGWAIIIWEIFGGEASKAAEANEGVKTAFNALRIIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCTTTATTAATGATTGAATTCTTCATCATTCTTAAAGCG---------GTAGGTGCAACAATTTCAACA---AACTCT------------------------------------TTTTGGAGA---TTGTTGGGTGGTACGCTAGTTATGCTTATCGGTGGTTTTGCTGGTGAA---------GCA------------------ATG------CTA---------------------------------ATC------------------------------------------------------------------TCTGCT------------------TCCCTAGGA---TTTATCATAGGTATGGTAGGTTGGGCAATTATCATCTGGGAAATC---------------TTT------GGT---GGTGAAGCTAGTAAAGCAGCT------------GAA---GCGAATGAAGGTGTA---AAA---ACT---GCA---TTC---AAT---GCACTA---AGAATAATTGTATTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGATIST-NS------------FWR-LLGGTLVMLIGGFAGE---A------M--L-----------I----------------------SA------SLG-FIIGMVGWAIIIWEI-----F--G-GEASKAA----E-ANEGV-K-T-A-F-N-AL-RIIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-EB0_35D03]_KJ927674 [unk-Proteo1-EB0_35D03] PRGD_OTU014_608236cafb8ea7461da832d504cecb6d gb|KJ927674| PRGD_OTU014_608236cafb8ea7461da832d504cecb6d, putative proteorhodopsin gene, partial cds. PRGD_OTU014_608236cafb8ea7461da832d504cecb6d, putative proteorhodopsin gene, partial cds. KJ927674 [[proteorhodopsin/Proteobacterial-like cluster 1/EB0_35D03-like subcluster]] proteorhodopsin Proteobacterial-like cluster 1 EB0_35D03-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185) TTAATTACTGTCCCATTATTAATGATTGAATTTTTCATCATCTTGAAAGCAGTAGGCGCTTCAGTGTCAACTAATTCTTTCTGGAGATTATTAGCTGGAACTATGGTAATGCTAATTGGTGGATTCGCAGGTGAGGCGCATTTAGTATCCGCTTCTGTCGGGTTTGTCGTGGGCATGATAGGTTGGGCAATCATCATCTGGGAAATCTTCGGTGGTGAGGCTAGTAAAGCAGCTGAGGCAAATGCAAGCGTAAAGTCTGCATTCAATGCTCTTAGAATTATTGTTTTAGTA LITVPLLMIEFFIILKAVGASVSTNSFWRLLAGTMVMLIGGFAGEAHLVSASVGFVVGMIGWAIIIWEIFGGEASKAAEANASVKSAFNALRIIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTCCCATTATTAATGATTGAATTTTTCATCATCTTGAAAGCA---------GTAGGCGCTTCAGTGTCAACT---AATTCT------------------------------------TTCTGGAGA---TTATTAGCTGGAACTATGGTAATGCTAATTGGTGGATTCGCAGGTGAG---------GCG------------------CAT------TTA---------------------------------GTA------------------------------------------------------------------TCCGCT------------------TCTGTCGGG---TTTGTCGTGGGCATGATAGGTTGGGCAATCATCATCTGGGAAATC---------------TTC------GGT---GGTGAGGCTAGTAAAGCAGCT------------GAG---GCAAATGCAAGCGTA---AAG---TCT---GCA---TTC---AAT---GCTCTT---AGAATTATTGTTTTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGASVST-NS------------FWR-LLAGTMVMLIGGFAGE---A------H--L-----------V----------------------SA------SVG-FVVGMIGWAIIIWEI-----F--G-GEASKAA----E-ANASV-K-S-A-F-N-AL-RIIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-EB0_35D03]_KJ927677 [unk-Proteo1-EB0_35D03] PRGD_OTU014_966d5a8e7c0e1a7de33f9ff29c89f89c gb|KJ927677| PRGD_OTU014_966d5a8e7c0e1a7de33f9ff29c89f89c, putative proteorhodopsin gene, partial cds. PRGD_OTU014_966d5a8e7c0e1a7de33f9ff29c89f89c, putative proteorhodopsin gene, partial cds. KJ927677 [[proteorhodopsin/Proteobacterial-like cluster 1/EB0_35D03-like subcluster]] proteorhodopsin Proteobacterial-like cluster 1 EB0_35D03-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185) TTAATTACAGTGCCATTATTGATGATTGAATTTTTCATCATCTTGAAGGCAGTAGGCGCTAAAGTGTCAACTAATTCTTTTTGGAGACTATTAGCTGGAACTATGGTAATGCTAATTGGTGGATTCGCAGGTGAGGCGCATTTAATTTCCGCTTCTATGGGATTCGTCATAGGCATGATAGGTTGGGCAGTCATCATCTGGGAAATCTTCGGTGGTGAGGCTAGTAAAGCAGCTGAGGCAAATGCAAGCGTAAAGTCTGCATTTAATGCTCTTAGAATTATTGTTTTAGTA LITVPLLMIEFFIILKAVGAKVSTNSFWRLLAGTMVMLIGGFAGEAHLISASMGFVIGMIGWAVIIWEIFGGEASKAAEANASVKSAFNALRIIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTATTGATGATTGAATTTTTCATCATCTTGAAGGCA---------GTAGGCGCTAAAGTGTCAACT---AATTCT------------------------------------TTTTGGAGA---CTATTAGCTGGAACTATGGTAATGCTAATTGGTGGATTCGCAGGTGAG---------GCG------------------CAT------TTA---------------------------------ATT------------------------------------------------------------------TCCGCT------------------TCTATGGGA---TTCGTCATAGGCATGATAGGTTGGGCAGTCATCATCTGGGAAATC---------------TTC------GGT---GGTGAGGCTAGTAAAGCAGCT------------GAG---GCAAATGCAAGCGTA---AAG---TCT---GCA---TTT---AAT---GCTCTT---AGAATTATTGTTTTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAKVST-NS------------FWR-LLAGTMVMLIGGFAGE---A------H--L-----------I----------------------SA------SMG-FVIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANASV-K-S-A-F-N-AL-RIIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-EB0_35D03]_KJ927676 [unk-Proteo1-EB0_35D03] PRGD_OTU014_8e8808ec8fe7338f8d0b621155e4f97a gb|KJ927676| PRGD_OTU014_8e8808ec8fe7338f8d0b621155e4f97a, putative proteorhodopsin gene, partial cds. PRGD_OTU014_8e8808ec8fe7338f8d0b621155e4f97a, putative proteorhodopsin gene, partial cds. KJ927676 [[proteorhodopsin/Proteobacterial-like cluster 1/EB0_35D03-like subcluster]] proteorhodopsin Proteobacterial-like cluster 1 EB0_35D03-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Bering strait marine 67.49 -168.12 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12) TTAATTACAGTGCCATTATTGATGATTGAATTCTTCATTATTCTGAAAGCAGTAGGCGCTTCAGTATCAACAAACTCTTTTTGGAGATTGTTAGTAGGTACTCTAGTCATGCTTATTGGTGGATTCGCAGGTGAGGCGCATTTAATGTCCGCTTCTATGGGATTTGTCATCGGCATGATAGGTTGGGCAATCATCATCTGGGAAATCTTCGGTGGTGAAGCTAGTAAAGCAGCTGAGGCAAATGCAAGCGTAAAGTCTGCATTTAATGCTCTTAGAATTATTGTTTTAGTG LITVPLLMIEFFIILKAVGASVSTNSFWRLLVGTLVMLIGGFAGEAHLMSASMGFVIGMIGWAIIIWEIFGGEASKAAEANASVKSAFNALRIIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTATTGATGATTGAATTCTTCATTATTCTGAAAGCA---------GTAGGCGCTTCAGTATCAACA---AACTCT------------------------------------TTTTGGAGA---TTGTTAGTAGGTACTCTAGTCATGCTTATTGGTGGATTCGCAGGTGAG---------GCG------------------CAT------TTA---------------------------------ATG------------------------------------------------------------------TCCGCT------------------TCTATGGGA---TTTGTCATCGGCATGATAGGTTGGGCAATCATCATCTGGGAAATC---------------TTC------GGT---GGTGAAGCTAGTAAAGCAGCT------------GAG---GCAAATGCAAGCGTA---AAG---TCT---GCA---TTT---AAT---GCTCTT---AGAATTATTGTTTTAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGASVST-NS------------FWR-LLVGTLVMLIGGFAGE---A------H--L-----------M----------------------SA------SMG-FVIGMIGWAIIIWEI-----F--G-GEASKAA----E-ANASV-K-S-A-F-N-AL-RIIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-EB0_35D03]_KJ927678 [unk-Proteo1-EB0_35D03] PRGD_OTU014_978821aabc026ed8e56abd40baa888ba gb|KJ927678| PRGD_OTU014_978821aabc026ed8e56abd40baa888ba, putative proteorhodopsin gene, partial cds. PRGD_OTU014_978821aabc026ed8e56abd40baa888ba, putative proteorhodopsin gene, partial cds. KJ927678 [[proteorhodopsin/Proteobacterial-like cluster 1/EB0_35D03-like subcluster]] proteorhodopsin Proteobacterial-like cluster 1 EB0_35D03-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Bering strait marine 67.49 -168.12 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (67.49, -168.12) TTAATTACAGTGCCATTATTGATGATTGAATTCTTCATTATTCTGAAAGCAGTAGGCGCTTCAGTATCAACAAACTCTTTTTGGAGATTGTTAGTAGGTACTCTAGTTATGCTTATTGGTGGATTCGCAGGTGAAGCGCATTTAATGTCCGCTTCTATGGGATTTGTCATTGGTATGATAGGTTGGGCAATCATCATCTGGGAAATCTTCGGTGGTGAGGCTAGTAAAGCAGCTGAGGCAAATGCAAGCGTAAAGTCTGCATTCAATGCTCTTAGAATTATTGTTTTAGTA LITVPLLMIEFFIILKAVGASVSTNSFWRLLVGTLVMLIGGFAGEAHLMSASMGFVIGMIGWAIIIWEIFGGEASKAAEANASVKSAFNALRIIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTATTGATGATTGAATTCTTCATTATTCTGAAAGCA---------GTAGGCGCTTCAGTATCAACA---AACTCT------------------------------------TTTTGGAGA---TTGTTAGTAGGTACTCTAGTTATGCTTATTGGTGGATTCGCAGGTGAA---------GCG------------------CAT------TTA---------------------------------ATG------------------------------------------------------------------TCCGCT------------------TCTATGGGA---TTTGTCATTGGTATGATAGGTTGGGCAATCATCATCTGGGAAATC---------------TTC------GGT---GGTGAGGCTAGTAAAGCAGCT------------GAG---GCAAATGCAAGCGTA---AAG---TCT---GCA---TTC---AAT---GCTCTT---AGAATTATTGTTTTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGASVST-NS------------FWR-LLVGTLVMLIGGFAGE---A------H--L-----------M----------------------SA------SMG-FVIGMIGWAIIIWEI-----F--G-GEASKAA----E-ANASV-K-S-A-F-N-AL-RIIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-EB0_35D03]_KJ929692 [unk-Proteo1-EB0_35D03] PRGD_OTU198_otuREP_1aba812108628d49904a85a1300a2501 gb|KJ929692| PRGD_OTU198_otuREP_1aba812108628d49904a85a1300a2501, putative proteorhodopsin gene, partial cds. PRGD_OTU198_otuREP_1aba812108628d49904a85a1300a2501, putative proteorhodopsin gene, partial cds. KJ929692 [[proteorhodopsin/Proteobacterial-like cluster 1/EB0_35D03-like subcluster]] proteorhodopsin Proteobacterial-like cluster 1 EB0_35D03-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) TTAATTACTGTCCCACTTTTAATGATAGAGTTTTATATAATATTAAAAGCTGTAGGTGCTTCTGTTTCAAATAACTCATTTTGGAGATTGTTAGTAGGAACTTTAGTTATGCTTCTAGGTGGATACTTAGGAGAATCACAAGTAATTTCTGCTACTTTAGGCTTTATAATTGGTATGGTAGGATGGGTTATAATAATATGGGAAATATTCGGCGGTGAAGCTAGTAAAGCTGCTGACGCCAATGAAGGTATTAAATCAGCATTTAATGCACTTAGAATAATAGTTTTAGTA LITVPLLMIEFYIILKAVGASVSNNSFWRLLVGTLVMLLGGYLGESQVISATLGFIIGMVGWVIIIWEIFGGEASKAADANEGIKSAFNALRIIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTCCCACTTTTAATGATAGAGTTTTATATAATATTAAAAGCT---------GTAGGTGCTTCTGTTTCAAAT---AACTCA------------------------------------TTTTGGAGA---TTGTTAGTAGGAACTTTAGTTATGCTTCTAGGTGGATACTTAGGAGAA---------TCA------------------CAA------GTA---------------------------------ATT------------------------------------------------------------------TCTGCT------------------ACTTTAGGC---TTTATAATTGGTATGGTAGGATGGGTTATAATAATATGGGAAATA---------------TTC------GGC---GGTGAAGCTAGTAAAGCTGCT------------GAC---GCCAATGAAGGTATT---AAA---TCA---GCA---TTT---AAT---GCACTT---AGAATAATAGTTTTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYIILKA---VGASVSN-NS------------FWR-LLVGTLVMLLGGYLGE---S------Q--V-----------I----------------------SA------TLG-FIIGMVGWVIIIWEI-----F--G-GEASKAA----D-ANEGI-K-S-A-F-N-AL-RIIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-EB0_35D03]_KJ929693 [unk-Proteo1-EB0_35D03] PRGD_OTU198_fac779e31bd4557c7242e37e4c88f5b3 gb|KJ929693| PRGD_OTU198_fac779e31bd4557c7242e37e4c88f5b3, putative proteorhodopsin gene, partial cds. PRGD_OTU198_fac779e31bd4557c7242e37e4c88f5b3, putative proteorhodopsin gene, partial cds. KJ929693 [[proteorhodopsin/Proteobacterial-like cluster 1/EB0_35D03-like subcluster]] proteorhodopsin Proteobacterial-like cluster 1 EB0_35D03-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACTGTTCCTCTTTTAATGATAGAATTTTATATAATATTAAAAGCTGTAGGTGCTTCTGTTTCAAATAACTCATTTTGGAGATTGTTAGTAGGAACTTTAGTTATGCTTCTAGGTGGATACTTAGGAGAATCACAAGTAATTTCTGCTACTTTAGGCTTTATAATTGGTATGGTAGGATGGGTTATAATAATATGGGAAATATTCGGGGGTGAAGCTAGTAAAGCTGCTGACGCCAACGAAGGTATTAAATCAGCATTTAATGCACTTAGAATCATAGTTTTAGTA LITVPLLMIEFYIILKAVGASVSNNSFWRLLVGTLVMLLGGYLGESQVISATLGFIIGMVGWVIIIWEIFGGEASKAADANEGIKSAFNALRIIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTTCCTCTTTTAATGATAGAATTTTATATAATATTAAAAGCT---------GTAGGTGCTTCTGTTTCAAAT---AACTCA------------------------------------TTTTGGAGA---TTGTTAGTAGGAACTTTAGTTATGCTTCTAGGTGGATACTTAGGAGAA---------TCA------------------CAA------GTA---------------------------------ATT------------------------------------------------------------------TCTGCT------------------ACTTTAGGC---TTTATAATTGGTATGGTAGGATGGGTTATAATAATATGGGAAATA---------------TTC------GGG---GGTGAAGCTAGTAAAGCTGCT------------GAC---GCCAACGAAGGTATT---AAA---TCA---GCA---TTT---AAT---GCACTT---AGAATCATAGTTTTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYIILKA---VGASVSN-NS------------FWR-LLVGTLVMLLGGYLGE---S------Q--V-----------I----------------------SA------TLG-FIIGMVGWVIIIWEI-----F--G-GEASKAA----D-ANEGI-K-S-A-F-N-AL-RIIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-a]_KJ929051 [unk-Proteo1-a] PRGD_OTU071_34c75a7f57fb3922472d4480ddcd99ce gb|KJ929051| PRGD_OTU071_34c75a7f57fb3922472d4480ddcd99ce, putative proteorhodopsin gene, partial cds. PRGD_OTU071_34c75a7f57fb3922472d4480ddcd99ce, putative proteorhodopsin gene, partial cds. KJ929051 [[proteorhodopsin/Proteobacterial-like cluster 1/A subcluster]] proteorhodopsin Proteobacterial-like cluster 1 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) ATTTTAACAGTTCCTCTTCAAATGGTTGAATTTTACCTAATATTAATCGCTGCTGGTGCTGCTGTTTCTGGAAGTTCTTTCTGGAGACTTTTAGTTGGTACATTGGTAATGATAGTTGGTGGATACTTAGGTGAAGCTGGAATTATCTCTGTATTACTTGGCTTTATTGTCGGAATGATAGGATGGGCTGTAATTATATGGGAGATCTTCCGAGGTGAAGCTAGTCAAGCTGCAGCTTCAAATGAATCAGTTTCATCAGCATTTAATGCTATGAGATTAGTTGTACTTGTT ILTVPLQMVEFYLILIAAGAAVSGSSFWRLLVGTLVMIVGGYLGEAGIISVLLGFIVGMIGWAVIIWEIFRGEASQAAASNESVSSAFNAMRLVVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACAGTTCCTCTTCAAATGGTTGAATTTTACCTAATATTAATCGCT---------GCTGGTGCTGCTGTTTCTGGA---AGTTCT------------------------------------TTCTGGAGA---CTTTTAGTTGGTACATTGGTAATGATAGTTGGTGGATACTTAGGTGAA---------GCT------------------GGA------ATT---------------------------------ATC------------------------------------------------------------------TCTGTA------------------TTACTTGGC---TTTATTGTCGGAATGATAGGATGGGCTGTAATTATATGGGAGATC---------------TTC------CGA---GGTGAAGCTAGTCAAGCTGCA------------GCT---TCAAATGAATCAGTT---TCA---TCA---GCA---TTT---AAT---GCTATG---AGATTAGTTGTACTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLQMVEFYLILIA---AGAAVSG-SS------------FWR-LLVGTLVMIVGGYLGE---A------G--I-----------I----------------------SV------LLG-FIVGMIGWAVIIWEI-----F--R-GEASQAA----A-SNESV-S-S-A-F-N-AM-RLVVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-a]_KJ929056 [unk-Proteo1-a] PRGD_OTU071_7cbfdd951ce831c474d474e4d6451afb gb|KJ929056| PRGD_OTU071_7cbfdd951ce831c474d474e4d6451afb, putative proteorhodopsin gene, partial cds. PRGD_OTU071_7cbfdd951ce831c474d474e4d6451afb, putative proteorhodopsin gene, partial cds. KJ929056 [[proteorhodopsin/Proteobacterial-like cluster 1/A subcluster]] proteorhodopsin Proteobacterial-like cluster 1 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTTTAACAGTTCCTCTTCAAATGGTTGAATTTTATCTAATATTAATTGCCGCTGGTGCTGCAGTTTCTGGAAGTTCTTTCTGGAGACTTTTAGTTGGTACTTTGGTGATGATAGTTGGTGGATACCTAGGTGAAGCTGGAATTATCTCAGTATTACTTGGCTTTATTGTCGGAATGATAGGATGGGCTGTAATTATATGGGAAATCTTCCGAGGTGAAGCTAGTCAAGCTGCAGCTTCAAATGAATCAGTCTCATCAGCATTTAATGCAATGAGATTAGTTGTACTTGTT ILTVPLQMVEFYLILIAAGAAVSGSSFWRLLVGTLVMIVGGYLGEAGIISVLLGFIVGMIGWAVIIWEIFRGEASQAAASNESVSSAFNAMRLVVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACAGTTCCTCTTCAAATGGTTGAATTTTATCTAATATTAATTGCC---------GCTGGTGCTGCAGTTTCTGGA---AGTTCT------------------------------------TTCTGGAGA---CTTTTAGTTGGTACTTTGGTGATGATAGTTGGTGGATACCTAGGTGAA---------GCT------------------GGA------ATT---------------------------------ATC------------------------------------------------------------------TCAGTA------------------TTACTTGGC---TTTATTGTCGGAATGATAGGATGGGCTGTAATTATATGGGAAATC---------------TTC------CGA---GGTGAAGCTAGTCAAGCTGCA------------GCT---TCAAATGAATCAGTC---TCA---TCA---GCA---TTT---AAT---GCAATG---AGATTAGTTGTACTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLQMVEFYLILIA---AGAAVSG-SS------------FWR-LLVGTLVMIVGGYLGE---A------G--I-----------I----------------------SV------LLG-FIVGMIGWAVIIWEI-----F--R-GEASQAA----A-SNESV-S-S-A-F-N-AM-RLVVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-a]_KJ929053 [unk-Proteo1-a] PRGD_OTU071_4e88551f80a54764dd308edee9af0112 gb|KJ929053| PRGD_OTU071_4e88551f80a54764dd308edee9af0112, putative proteorhodopsin gene, partial cds. PRGD_OTU071_4e88551f80a54764dd308edee9af0112, putative proteorhodopsin gene, partial cds. KJ929053 [[proteorhodopsin/Proteobacterial-like cluster 1/A subcluster]] proteorhodopsin Proteobacterial-like cluster 1 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097) ATTTTAACAGTTCCTCTTCAGATGGTTGAATTTTACCTAATATTAATAGCTGCTGGTGCTGCTGTTTCTGGAAGTTCTTTTTGGAGACTTTTAGTTGGTACTTTAGTTATGATTATCGGTGGATACTTGGGTGAAGCTGGAATTATTTCAGTTCTACTTGGCTTTATTGTCGGTATGATTGGATGGGCAGTAATTATTTGGGAAATCTTTCGAGGTGAAGCTAGTCAAGCGGCTGCTTCAAATGAATCCGTTTCATCAGCATTCAATGCTATGAGACTAGTTGTGCTTGTT ILTVPLQMVEFYLILIAAGAAVSGSSFWRLLVGTLVMIIGGYLGEAGIISVLLGFIVGMIGWAVIIWEIFRGEASQAAASNESVSSAFNAMRLVVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACAGTTCCTCTTCAGATGGTTGAATTTTACCTAATATTAATAGCT---------GCTGGTGCTGCTGTTTCTGGA---AGTTCT------------------------------------TTTTGGAGA---CTTTTAGTTGGTACTTTAGTTATGATTATCGGTGGATACTTGGGTGAA---------GCT------------------GGA------ATT---------------------------------ATT------------------------------------------------------------------TCAGTT------------------CTACTTGGC---TTTATTGTCGGTATGATTGGATGGGCAGTAATTATTTGGGAAATC---------------TTT------CGA---GGTGAAGCTAGTCAAGCGGCT------------GCT---TCAAATGAATCCGTT---TCA---TCA---GCA---TTC---AAT---GCTATG---AGACTAGTTGTGCTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLQMVEFYLILIA---AGAAVSG-SS------------FWR-LLVGTLVMIIGGYLGE---A------G--I-----------I----------------------SV------LLG-FIVGMIGWAVIIWEI-----F--R-GEASQAA----A-SNESV-S-S-A-F-N-AM-RLVVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-a]_KJ929058 [unk-Proteo1-a] PRGD_OTU071_b210be6163786be042899363dcfcd76b gb|KJ929058| PRGD_OTU071_b210be6163786be042899363dcfcd76b, putative proteorhodopsin gene, partial cds. PRGD_OTU071_b210be6163786be042899363dcfcd76b, putative proteorhodopsin gene, partial cds. KJ929058 [[proteorhodopsin/Proteobacterial-like cluster 1/A subcluster]] proteorhodopsin Proteobacterial-like cluster 1 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) ATTTTAACAGTTCCTCTTCAAATGGTTGAATTTTACCTAATATTAATAGCCGCTGGTGCTGCTGTTTCTGGAAGTTCTTTTTGGAGACTTTTAGTTGGTACTTTGGTTATGATTATAGGTGGATACCTGGGTGAAGCTGGAATTATTTCAGTTCTACTCGGCTTTATTGTCGGTATGATTGGTTGGGCAGTAATTATATGGGAAATCTTCCGAGGTGAAGCTAGTCAAGCGGCTGCTTCAAATGAATCTGTATCATCAGCATTTAATGCTATGAGACTAGTTGTGCTTGTT ILTVPLQMVEFYLILIAAGAAVSGSSFWRLLVGTLVMIIGGYLGEAGIISVLLGFIVGMIGWAVIIWEIFRGEASQAAASNESVSSAFNAMRLVVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACAGTTCCTCTTCAAATGGTTGAATTTTACCTAATATTAATAGCC---------GCTGGTGCTGCTGTTTCTGGA---AGTTCT------------------------------------TTTTGGAGA---CTTTTAGTTGGTACTTTGGTTATGATTATAGGTGGATACCTGGGTGAA---------GCT------------------GGA------ATT---------------------------------ATT------------------------------------------------------------------TCAGTT------------------CTACTCGGC---TTTATTGTCGGTATGATTGGTTGGGCAGTAATTATATGGGAAATC---------------TTC------CGA---GGTGAAGCTAGTCAAGCGGCT------------GCT---TCAAATGAATCTGTA---TCA---TCA---GCA---TTT---AAT---GCTATG---AGACTAGTTGTGCTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLQMVEFYLILIA---AGAAVSG-SS------------FWR-LLVGTLVMIIGGYLGE---A------G--I-----------I----------------------SV------LLG-FIVGMIGWAVIIWEI-----F--R-GEASQAA----A-SNESV-S-S-A-F-N-AM-RLVVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-a]_KJ929054 [unk-Proteo1-a] PRGD_OTU071_5419352735345dbdc348f26d8cc57651 gb|KJ929054| PRGD_OTU071_5419352735345dbdc348f26d8cc57651, putative proteorhodopsin gene, partial cds. PRGD_OTU071_5419352735345dbdc348f26d8cc57651, putative proteorhodopsin gene, partial cds. KJ929054 [[proteorhodopsin/Proteobacterial-like cluster 1/A subcluster]] proteorhodopsin Proteobacterial-like cluster 1 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTCTAACAGTCCCTCTTCAAATGGTTGAATTTTATTTAATTTTGATAGCTGCTGGTGCTGCTGTTTCTGGTAGTTCTTTCTGGAGACTTTTAGTTGGTACTTTGGTTATGATTATAGGTGGTTACCTAGGTGAAGCTGGAATTATTTCAGTATTACTTGGCTTTATTGTCGGTATGATTGGATGGGCAGTAATCATTTGGGAAATCTTCAGAGGTGAGGCTAGTCAAGCGGCAGCTTCAAATGAATCAGTTTCATCAGCATTTAATGCGATGAGATTAGTTGTTCTTGTT ILTVPLQMVEFYLILIAAGAAVSGSSFWRLLVGTLVMIIGGYLGEAGIISVLLGFIVGMIGWAVIIWEIFRGEASQAAASNESVSSAFNAMRLVVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTAACAGTCCCTCTTCAAATGGTTGAATTTTATTTAATTTTGATAGCT---------GCTGGTGCTGCTGTTTCTGGT---AGTTCT------------------------------------TTCTGGAGA---CTTTTAGTTGGTACTTTGGTTATGATTATAGGTGGTTACCTAGGTGAA---------GCT------------------GGA------ATT---------------------------------ATT------------------------------------------------------------------TCAGTA------------------TTACTTGGC---TTTATTGTCGGTATGATTGGATGGGCAGTAATCATTTGGGAAATC---------------TTC------AGA---GGTGAGGCTAGTCAAGCGGCA------------GCT---TCAAATGAATCAGTT---TCA---TCA---GCA---TTT---AAT---GCGATG---AGATTAGTTGTTCTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLQMVEFYLILIA---AGAAVSG-SS------------FWR-LLVGTLVMIIGGYLGE---A------G--I-----------I----------------------SV------LLG-FIVGMIGWAVIIWEI-----F--R-GEASQAA----A-SNESV-S-S-A-F-N-AM-RLVVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-a]_KJ929059 [unk-Proteo1-a] PRGD_OTU071_c8223d4ace740669e1674d0b88bf687e gb|KJ929059| PRGD_OTU071_c8223d4ace740669e1674d0b88bf687e, putative proteorhodopsin gene, partial cds. PRGD_OTU071_c8223d4ace740669e1674d0b88bf687e, putative proteorhodopsin gene, partial cds. KJ929059 [[proteorhodopsin/Proteobacterial-like cluster 1/A subcluster]] proteorhodopsin Proteobacterial-like cluster 1 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTTTAACAGTTCCTCTTCAAATGGTTGAGTTTTACTTAATCTTAATTGCTGCCGGCGCTGCTGTTTCTGGTAGTTCTTTCTGGAGACTTTTAGTTGGTACATTAGTTATGATTATCGGTGGATACCTTGGTGAAGCTGGAATTATTTCAGTATTACTTGGCTTTATTGTCGGTATGATTGGATGGGCAGTAATTATTTGGGAAATCTTCAGAGGTGAGGCTAGTCAAGCTGCAGCTTCAAATGAATCAGTTTCATCAGCATTTAATGCTATGAGATTAGTCGTACTTGTT ILTVPLQMVEFYLILIAAGAAVSGSSFWRLLVGTLVMIIGGYLGEAGIISVLLGFIVGMIGWAVIIWEIFRGEASQAAASNESVSSAFNAMRLVVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACAGTTCCTCTTCAAATGGTTGAGTTTTACTTAATCTTAATTGCT---------GCCGGCGCTGCTGTTTCTGGT---AGTTCT------------------------------------TTCTGGAGA---CTTTTAGTTGGTACATTAGTTATGATTATCGGTGGATACCTTGGTGAA---------GCT------------------GGA------ATT---------------------------------ATT------------------------------------------------------------------TCAGTA------------------TTACTTGGC---TTTATTGTCGGTATGATTGGATGGGCAGTAATTATTTGGGAAATC---------------TTC------AGA---GGTGAGGCTAGTCAAGCTGCA------------GCT---TCAAATGAATCAGTT---TCA---TCA---GCA---TTT---AAT---GCTATG---AGATTAGTCGTACTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLQMVEFYLILIA---AGAAVSG-SS------------FWR-LLVGTLVMIIGGYLGE---A------G--I-----------I----------------------SV------LLG-FIVGMIGWAVIIWEI-----F--R-GEASQAA----A-SNESV-S-S-A-F-N-AM-RLVVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-a]_KJ929049 [unk-Proteo1-a] PRGD_OTU071_otuREP_5b58a77596addd73282150bc2ad973e2 gb|KJ929049| PRGD_OTU071_otuREP_5b58a77596addd73282150bc2ad973e2, putative proteorhodopsin gene, partial cds. PRGD_OTU071_otuREP_5b58a77596addd73282150bc2ad973e2, putative proteorhodopsin gene, partial cds. KJ929049 [[proteorhodopsin/Proteobacterial-like cluster 1/A subcluster]] proteorhodopsin Proteobacterial-like cluster 1 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) ATTCTAACAGTCCCTCTTCAAATGGTTGAGTTTTACTTAATCTTAATAGCTGCTGGTGCTGCTGTTTCTGGTAGTTCTTTCTGGAGACTTTTAGTTGGTACATTAGTTATGATTATCGGTGGTTATCTTGGTGAAGCTGGAATTATCTCAGTATTACTTGGATTTATTGTTGGTATGATTGGATGGGCAGTAATTATTTGGGAAATATTCAGAGGTGAAGCTAGTCAAGCTGCCGCTTCAAATGAATCTGTTTCATCAGCATTTAATGCTATGAGATTAGTTGTACTTGTT ILTVPLQMVEFYLILIAAGAAVSGSSFWRLLVGTLVMIIGGYLGEAGIISVLLGFIVGMIGWAVIIWEIFRGEASQAAASNESVSSAFNAMRLVVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTAACAGTCCCTCTTCAAATGGTTGAGTTTTACTTAATCTTAATAGCT---------GCTGGTGCTGCTGTTTCTGGT---AGTTCT------------------------------------TTCTGGAGA---CTTTTAGTTGGTACATTAGTTATGATTATCGGTGGTTATCTTGGTGAA---------GCT------------------GGA------ATT---------------------------------ATC------------------------------------------------------------------TCAGTA------------------TTACTTGGA---TTTATTGTTGGTATGATTGGATGGGCAGTAATTATTTGGGAAATA---------------TTC------AGA---GGTGAAGCTAGTCAAGCTGCC------------GCT---TCAAATGAATCTGTT---TCA---TCA---GCA---TTT---AAT---GCTATG---AGATTAGTTGTACTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLQMVEFYLILIA---AGAAVSG-SS------------FWR-LLVGTLVMIIGGYLGE---A------G--I-----------I----------------------SV------LLG-FIVGMIGWAVIIWEI-----F--R-GEASQAA----A-SNESV-S-S-A-F-N-AM-RLVVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-a]_KJ929050 [unk-Proteo1-a] PRGD_OTU071_15ae624074e0672e8c73cc24b23537ba gb|KJ929050| PRGD_OTU071_15ae624074e0672e8c73cc24b23537ba, putative proteorhodopsin gene, partial cds. PRGD_OTU071_15ae624074e0672e8c73cc24b23537ba, putative proteorhodopsin gene, partial cds. KJ929050 [[proteorhodopsin/Proteobacterial-like cluster 1/A subcluster]] proteorhodopsin Proteobacterial-like cluster 1 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) ATTTTAACAGTTCCTCTTCAAATGGTTGAATTTTACTTAATTTTAATAGCTGCTGGTGCTGCTGTTTCTGGTAATTCTTTCTGGAGACTTTTAGTAGGTACATTAGTTATGATTATCGGTGGATACTTGGGTGAAGCTGGAATTATTTCAGTCTTACTTGGGTTTATTGTTGGTATGATTGGATGGGCAGTAATTATTTGGGAAATCTTCCGAGGTGAAGCTAGTCAAGCTGCAGCTTCAAACGAATCAGTTTCATCAGCATTTAATGCAATGAGATTAGTCGTACTTGTA ILTVPLQMVEFYLILIAAGAAVSGNSFWRLLVGTLVMIIGGYLGEAGIISVLLGFIVGMIGWAVIIWEIFRGEASQAAASNESVSSAFNAMRLVVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACAGTTCCTCTTCAAATGGTTGAATTTTACTTAATTTTAATAGCT---------GCTGGTGCTGCTGTTTCTGGT---AATTCT------------------------------------TTCTGGAGA---CTTTTAGTAGGTACATTAGTTATGATTATCGGTGGATACTTGGGTGAA---------GCT------------------GGA------ATT---------------------------------ATT------------------------------------------------------------------TCAGTC------------------TTACTTGGG---TTTATTGTTGGTATGATTGGATGGGCAGTAATTATTTGGGAAATC---------------TTC------CGA---GGTGAAGCTAGTCAAGCTGCA------------GCT---TCAAACGAATCAGTT---TCA---TCA---GCA---TTT---AAT---GCAATG---AGATTAGTCGTACTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLQMVEFYLILIA---AGAAVSG-NS------------FWR-LLVGTLVMIIGGYLGE---A------G--I-----------I----------------------SV------LLG-FIVGMIGWAVIIWEI-----F--R-GEASQAA----A-SNESV-S-S-A-F-N-AM-RLVVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-a]_KJ929052 [unk-Proteo1-a] PRGD_OTU071_477e3b7baed5f0131f7e711de783703f gb|KJ929052| PRGD_OTU071_477e3b7baed5f0131f7e711de783703f, putative proteorhodopsin gene, partial cds. PRGD_OTU071_477e3b7baed5f0131f7e711de783703f, putative proteorhodopsin gene, partial cds. KJ929052 [[proteorhodopsin/Proteobacterial-like cluster 1/A subcluster]] proteorhodopsin Proteobacterial-like cluster 1 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) ATTTTAACAGTTCCTCTTCAAATGGTTGAATTTTATTTAATTTTAATAGCTGCTGGTGCTGCTGTTTCTGGTAGTTCTTTCTGGAGACTTTTAGTTGGTACATTAGTTATGATTATCGGTGGATACTTGGGTGAAGCTGGAATTATTTCAGTCTTACTTGGGTTTATTGTTGGTATGATTGGATGGGCAGTAATTATTTGGGAAATCTTCCGAGGTGAAGCTAGTCAAGCTGCAGCTTCAAACGAATCAGTTTCATCAGCATTTAATGCAATGAGATTAGTCGTACTTGTA ILTVPLQMVEFYLILIAAGAAVSGSSFWRLLVGTLVMIIGGYLGEAGIISVLLGFIVGMIGWAVIIWEIFRGEASQAAASNESVSSAFNAMRLVVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACAGTTCCTCTTCAAATGGTTGAATTTTATTTAATTTTAATAGCT---------GCTGGTGCTGCTGTTTCTGGT---AGTTCT------------------------------------TTCTGGAGA---CTTTTAGTTGGTACATTAGTTATGATTATCGGTGGATACTTGGGTGAA---------GCT------------------GGA------ATT---------------------------------ATT------------------------------------------------------------------TCAGTC------------------TTACTTGGG---TTTATTGTTGGTATGATTGGATGGGCAGTAATTATTTGGGAAATC---------------TTC------CGA---GGTGAAGCTAGTCAAGCTGCA------------GCT---TCAAACGAATCAGTT---TCA---TCA---GCA---TTT---AAT---GCAATG---AGATTAGTCGTACTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLQMVEFYLILIA---AGAAVSG-SS------------FWR-LLVGTLVMIIGGYLGE---A------G--I-----------I----------------------SV------LLG-FIVGMIGWAVIIWEI-----F--R-GEASQAA----A-SNESV-S-S-A-F-N-AM-RLVVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-a]_KJ929057 [unk-Proteo1-a] PRGD_OTU071_9e7ee11448eac0fdcde14bb7018e9788 gb|KJ929057| PRGD_OTU071_9e7ee11448eac0fdcde14bb7018e9788, putative proteorhodopsin gene, partial cds. PRGD_OTU071_9e7ee11448eac0fdcde14bb7018e9788, putative proteorhodopsin gene, partial cds. KJ929057 [[proteorhodopsin/Proteobacterial-like cluster 1/A subcluster]] proteorhodopsin Proteobacterial-like cluster 1 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na GTTTTAACTGTTCCTCTTCAAATGGTTGAGTTTTATCTAATACTTATTGCCGCTGGTGCTGCCGTTTCTGGAGGATCCTTTTGGAGACTTTTAGTTGGTACATTAGTAATGATAATTGGTGGGTATCTTGGCGAAGCAGGAATCATTTCTGTTCTGCTAGGTTTCATAATTGGAATGATTGGTTGGGCAGTAATTATTTGGGAAATCTTTAGGGGTGAAGCAAGTCAAGCGGCTGCTTCAAATCCAGCAGTATCATCAGCATTCAATGCAATGAGATTAATTGTTCTTGTT VLTVPLQMVEFYLILIAAGAAVSGGSFWRLLVGTLVMIIGGYLGEAGIISVLLGFIIGMIGWAVIIWEIFRGEASQAAASNPAVSSAFNAMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTTAACTGTTCCTCTTCAAATGGTTGAGTTTTATCTAATACTTATTGCC---------GCTGGTGCTGCCGTTTCTGGA---GGATCC------------------------------------TTTTGGAGA---CTTTTAGTTGGTACATTAGTAATGATAATTGGTGGGTATCTTGGCGAA---------GCA------------------GGA------ATC---------------------------------ATT------------------------------------------------------------------TCTGTT------------------CTGCTAGGT---TTCATAATTGGAATGATTGGTTGGGCAGTAATTATTTGGGAAATC---------------TTT------AGG---GGTGAAGCAAGTCAAGCGGCT------------GCT---TCAAATCCAGCAGTA---TCA---TCA---GCA---TTC---AAT---GCAATG---AGATTAATTGTTCTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLQMVEFYLILIA---AGAAVSG-GS------------FWR-LLVGTLVMIIGGYLGE---A------G--I-----------I----------------------SV------LLG-FIIGMIGWAVIIWEI-----F--R-GEASQAA----A-SNPAV-S-S-A-F-N-AM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-Proteo1-a]_KJ929055 [unk-Proteo1-a] PRGD_OTU071_67a160c73fbb0ff35590fda5c33752fb gb|KJ929055| PRGD_OTU071_67a160c73fbb0ff35590fda5c33752fb, putative proteorhodopsin gene, partial cds. PRGD_OTU071_67a160c73fbb0ff35590fda5c33752fb, putative proteorhodopsin gene, partial cds. KJ929055 [[proteorhodopsin/Proteobacterial-like cluster 1/A subcluster]] proteorhodopsin Proteobacterial-like cluster 1 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na GTTTTAACCGTTCCATTACAAATGGTTGAATTCTATTTAATTTTGATTGCTGCTGGAGCTGCTGTATCAGGAGGTTCTTTTTGGAGACTTTTAGTTGGTACTTTAGTAATGGTTATTGGTGGTTATCTAGGAGAAGCAGGTATGATTTCTGTTTTACTAGGATTTATCATTGGTATGATTGGTTGGGCTGTAATCATCTGGGAAATTTTCAGAGGAGAAGCAAGTCAAGCCGCTTCTCAAAACGAATCAGTCTCTTCAGCATTCAATGCAATGAGATTAATTGTTCTTGTT VLTVPLQMVEFYLILIAAGAAVSGGSFWRLLVGTLVMVIGGYLGEAGMISVLLGFIIGMIGWAVIIWEIFRGEASQAASQNESVSSAFNAMRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTTAACCGTTCCATTACAAATGGTTGAATTCTATTTAATTTTGATTGCT---------GCTGGAGCTGCTGTATCAGGA---GGTTCT------------------------------------TTTTGGAGA---CTTTTAGTTGGTACTTTAGTAATGGTTATTGGTGGTTATCTAGGAGAA---------GCA------------------GGT------ATG---------------------------------ATT------------------------------------------------------------------TCTGTT------------------TTACTAGGA---TTTATCATTGGTATGATTGGTTGGGCTGTAATCATCTGGGAAATT---------------TTC------AGA---GGAGAAGCAAGTCAAGCCGCT------------TCT---CAAAACGAATCAGTC---TCT---TCA---GCA---TTC---AAT---GCAATG---AGATTAATTGTTCTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLQMVEFYLILIA---AGAAVSG-GS------------FWR-LLVGTLVMVIGGYLGE---A------G--M-----------I----------------------SV------LLG-FIIGMIGWAVIIWEI-----F--R-GEASQAA----S-QNESV-S-S-A-F-N-AM-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927743 [I-Planctomycetes-b] PRGD_OTU016_361ebabe0c8e408c481cde3a1bdd8e22 gb|KJ927743| PRGD_OTU016_361ebabe0c8e408c481cde3a1bdd8e22, putative proteorhodopsin gene, partial cds. PRGD_OTU016_361ebabe0c8e408c481cde3a1bdd8e22, putative proteorhodopsin gene, partial cds. KJ927743 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508) CTAATTACAGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGGGAGACACAAATCCTTGGTGTTTCAGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGCGGTAACATTGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTCACTGTA LITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQILGVSEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNIASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGGGAG---------ACA------------------CAA------ATC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGC---GGTAACATTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTCACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--I-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNIAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927741 [I-Planctomycetes-b] PRGD_OTU016_2ab05459f56834121200f7cf185ee037 gb|KJ927741| PRGD_OTU016_2ab05459f56834121200f7cf185ee037, putative proteorhodopsin gene, partial cds. PRGD_OTU016_2ab05459f56834121200f7cf185ee037, putative proteorhodopsin gene, partial cds. KJ927741 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), North Pacific Ocean (50.06, -139.53), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Indian Ocean (-23.5956, 69.0419) CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTATTGGGTGGTTACTTAGGCGAGACTCAAGTTCTTGGTGTTTCTGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTGCAGGTGAAGCCTCCAAGCTTAACGCAAACAGTGGTAACCTTGCCTCTCAGAATGCTTTCAAGACAATTCGTCTGATTGTTACTGTA LITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLLGGYLGETQVLGVSEMVGFIIGMAGWLYIIYEIFAGEASKLNANSGNLASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTATTGGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTT---------------------------------CTTGGT---GTT---------------------------------------------------------TCTGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------GCA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACAATT---CGTCTGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLLGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--A-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927766 [I-Planctomycetes-b] PRGD_OTU016_aa6249c8ad2640b046a434deaf513b7b gb|KJ927766| PRGD_OTU016_aa6249c8ad2640b046a434deaf513b7b, putative proteorhodopsin gene, partial cds. PRGD_OTU016_aa6249c8ad2640b046a434deaf513b7b, putative proteorhodopsin gene, partial cds. KJ927766 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (33.762, 29.175; 33.935, 18.508) CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTATTGGGTGGTTACTTAGGCGAGACTCAAGTTCTTGGTGTTTCTGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGCGAAGCCTCCAAGCTTAACGCAAACAGTGGTAACCTTGCCTCTCAGAATGCTTTCAAGACAATTCGTCTGATTGTTACTGTA LITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLLGGYLGETQVLGVSEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNLASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTATTGGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTT---------------------------------CTTGGT---GTT---------------------------------------------------------TCTGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGCGAAGCCTCCAAGCTTAACGCAAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACAATT---CGTCTGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLLGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927770 [I-Planctomycetes-b] PRGD_OTU016_adeb792ef636ae0ac4e6ab26b656f118 gb|KJ927770| PRGD_OTU016_adeb792ef636ae0ac4e6ab26b656f118, putative proteorhodopsin gene, partial cds. PRGD_OTU016_adeb792ef636ae0ac4e6ab26b656f118, putative proteorhodopsin gene, partial cds. KJ927770 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508) CTAATTACTGTCCCTCTCCAAATCGTAGAATTCTACTTAATCCTTGCTGCAGTCACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAGACTCAAGTCCTTGGTGTTTCAGAAATGGTTGGTTTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGCGGTAACCTAGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTTACTGTA LITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQVLGVSEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNLASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAATTCTACTTAATCCTTGCTGCA---------GTC---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGT---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGC---GGTAACCTAGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927781 [I-Planctomycetes-b] PRGD_OTU016_ea5e85f8d793d2d15982a5d9ad7a6a30 gb|KJ927781| PRGD_OTU016_ea5e85f8d793d2d15982a5d9ad7a6a30, putative proteorhodopsin gene, partial cds. PRGD_OTU016_ea5e85f8d793d2d15982a5d9ad7a6a30, putative proteorhodopsin gene, partial cds. KJ927781 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTCACAGTGGTCAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAGACTCAAGTCCTTGGTGTTTCAGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATTATTTTTGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGTGGTAACCTTGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTCACTGTA LITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQVLGVSEMVGFIIGMAGWLYIIFEIFKGEASKLNANSGNLASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTC---ACAGTGGTCAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATTATTTTTGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTCACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIFEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927745 [I-Planctomycetes-b] PRGD_OTU016_42c30648ec14f686b7fd6b97a57e8e39 gb|KJ927745| PRGD_OTU016_42c30648ec14f686b7fd6b97a57e8e39, putative proteorhodopsin gene, partial cds. PRGD_OTU016_42c30648ec14f686b7fd6b97a57e8e39, putative proteorhodopsin gene, partial cds. KJ927745 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419) CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTCACAGTGGTCAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAGACTCAAGTCCTTGGTGTTTCAGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGTGGTAACCTTGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTCACTGTA LITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQVLGVSEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNLASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTC---ACAGTGGTCAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTCACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927755 [I-Planctomycetes-b] PRGD_OTU016_5e9a6a953d91b3ecd7203ccd55ee5285 gb|KJ927755| PRGD_OTU016_5e9a6a953d91b3ecd7203ccd55ee5285, putative proteorhodopsin gene, partial cds. PRGD_OTU016_5e9a6a953d91b3ecd7203ccd55ee5285, putative proteorhodopsin gene, partial cds. KJ927755 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) CTAATTACTGTCCCACTCCAAATAGTAGAGTTTTATCTGATCCTTGCTGCAGTTACAGTGGTCAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTGGTAGGTGGTTACTTGGGCGAGACTCAAGTCCTTGGTGTTTCAGAAATGGTTGGGTTCATCATAGGTATGGCTGGATGGCTATACATCATCTATGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGCGGTAACCTTGCCTCCCAGAATGCTTTCAAGACGATTCGTCTAATTGTCACTGTG LITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQVLGVSEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNLASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTCCCACTCCAAATAGTAGAGTTTTATCTGATCCTTGCTGCA---------GTT---ACAGTGGTCAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTGGTAGGTGGTTACTTGGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGG---TTCATCATAGGTATGGCTGGATGGCTATACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGC---GGTAACCTTGCCTCC---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTAATTGTCACTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927740 [I-Planctomycetes-b] PRGD_OTU016_2a6ef4bd44b9c09f9600b78478355aa1 gb|KJ927740| PRGD_OTU016_2a6ef4bd44b9c09f9600b78478355aa1, putative proteorhodopsin gene, partial cds. PRGD_OTU016_2a6ef4bd44b9c09f9600b78478355aa1, putative proteorhodopsin gene, partial cds. KJ927740 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175) CTGATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTATTGGGTGGTTACTTAGGCGAGACTCAAGTTCTTGGTGTTTCTGAAATGGTTGGATTCATCATTGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGTGGTAACCTTGCCTCTCAGAATGCTTTCAAGACAATTCGTCTTATTGTAACTGTA LITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLLGGYLGETQVLGVSEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNLASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTATTGGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTT---------------------------------CTTGGT---GTT---------------------------------------------------------TCTGAA------------------ATGGTTGGA---TTCATCATTGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACAATT---CGTCTTATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLLGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927747 [I-Planctomycetes-b] PRGD_OTU016_4584caab8d8671b6d0c8ca27fca260fe gb|KJ927747| PRGD_OTU016_4584caab8d8671b6d0c8ca27fca260fe, putative proteorhodopsin gene, partial cds. PRGD_OTU016_4584caab8d8671b6d0c8ca27fca260fe, putative proteorhodopsin gene, partial cds. KJ927747 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATTACTGTCCCTCTACAAATCGTAGAGTTCTACCTGATCCTTGCTGCAGTTACCGTGGTAAGTGTACGCGTATTCTGGAAGCTTTTAGTCGCATCAATTGTGATGCTTGTTGGTGGTTACTTAGGCGAGACTCAAGTCCTTGGTGTTTCAGAAATGACTGGATTCATCATAGGTATGGTTGGATGGCTCTACATCATCTACGAAATATTCAAAGGTGAAGCCTCCAAGCTTAATGCAAACAGTGGTAACATTGCCTCTCAGAATGCTTTCAAGACGATCCGTCTAATTGTAACTGTT LITVPLQIVEFYLILAAVTVVSVRVFWKLLVASIVMLVGGYLGETQVLGVSEMTGFIIGMVGWLYIIYEIFKGEASKLNANSGNIASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTCCCTCTACAAATCGTAGAGTTCTACCTGATCCTTGCTGCA---------GTT---ACCGTGGTAAGTGTA---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCAATTGTGATGCTTGTTGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGACTGGA---TTCATCATAGGTATGGTTGGATGGCTCTACATCATCTACGAAATA---------------TTC------AAA---GGTGAAGCCTCCAAGCTTAATGCAAAC------AGT---GGTAACATTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATC---CGTCTAATTGTAACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASIVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MTG-FIIGMVGWLYIIYEI-----F--K-GEASKLNAN--S-GNIAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927777 [I-Planctomycetes-b] PRGD_OTU016_e13fd217ae2346a76b5a687887c87188 gb|KJ927777| PRGD_OTU016_e13fd217ae2346a76b5a687887c87188, putative proteorhodopsin gene, partial cds. PRGD_OTU016_e13fd217ae2346a76b5a687887c87188, putative proteorhodopsin gene, partial cds. KJ927777 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833) CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTGATCCTTGCTGCAGTCACCGTGGTAAGTGTACGCGTATTCTGGAAGCTTTTAGTAGCATCACTTGTCATGCTTGTTGGTGGTTACTTAGGCGAGACTCAAGTCCTTGGTGTTTCAGAAATGACTGGATTCATCATAGGTATGGTTGGATGGCTCTACATCATCTACGAAATATTCAAAGGTGAAGCCTCCAAGCTTAATGCAAACAGTGGTAACATTGCCTCTCAGAATGCTTTCAAGACGATCCGTCTAATTGTAACTTTT LITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQVLGVSEMTGFIIGMVGWLYIIYEIFKGEASKLNANSGNIASQNAFKTIRLIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTGATCCTTGCTGCA---------GTC---ACCGTGGTAAGTGTA---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTAGCATCACTTGTCATGCTTGTTGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGACTGGA---TTCATCATAGGTATGGTTGGATGGCTCTACATCATCTACGAAATA---------------TTC------AAA---GGTGAAGCCTCCAAGCTTAATGCAAAC------AGT---GGTAACATTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATC---CGTCTAATTGTAACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MTG-FIIGMVGWLYIIYEI-----F--K-GEASKLNAN--S-GNIAS-Q-N-A-F-K-TI-RLIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927752 [I-Planctomycetes-b] PRGD_OTU016_571b08792be42349a8557112f41d88e7 gb|KJ927752| PRGD_OTU016_571b08792be42349a8557112f41d88e7, putative proteorhodopsin gene, partial cds. PRGD_OTU016_571b08792be42349a8557112f41d88e7, putative proteorhodopsin gene, partial cds. KJ927752 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (73.9992, 19.2097), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) CTAATTACAGTCCCTCTACAAATCGTAGAGTTCTACCTGATCCTTGCTGCAGTTACCGTGGTAAGTGTACGTGTATTCTGGAAGCTTTTAGTCGCATCAATTGTGATGCTTGTAGGTGGTTACTTAGGCGAGACTCAAGTCCTTGGTGTTTCAGAAATGACTGGATTCATCATAGGTATGGTTGGTTGGCTCTACATTATCTATGAAATATTCAAAGGTGAAGCCTCCAAGCTTAATGCAAACAGTGGTAACATTGCCTCTCAAAATGCTTTCAAGACGATCCGTCTGATTGTAACTGTT LITVPLQIVEFYLILAAVTVVSVRVFWKLLVASIVMLVGGYLGETQVLGVSEMTGFIIGMVGWLYIIYEIFKGEASKLNANSGNIASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTCCCTCTACAAATCGTAGAGTTCTACCTGATCCTTGCTGCA---------GTT---ACCGTGGTAAGTGTA---CGTGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCAATTGTGATGCTTGTAGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGACTGGA---TTCATCATAGGTATGGTTGGTTGGCTCTACATTATCTATGAAATA---------------TTC------AAA---GGTGAAGCCTCCAAGCTTAATGCAAAC------AGT---GGTAACATTGCCTCT---CAA---AAT---GCT---TTC---AAG---ACGATC---CGTCTGATTGTAACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASIVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MTG-FIIGMVGWLYIIYEI-----F--K-GEASKLNAN--S-GNIAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927746 [I-Planctomycetes-b] PRGD_OTU016_452fc69ff7dc8986577918141ea68573 gb|KJ927746| PRGD_OTU016_452fc69ff7dc8986577918141ea68573, putative proteorhodopsin gene, partial cds. PRGD_OTU016_452fc69ff7dc8986577918141ea68573, putative proteorhodopsin gene, partial cds. KJ927746 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) CTAATTACTGTCCCTCTACAAATCGTAGAGTTCTACTTGATCCTTGCTGCAGTTACCGTGGTAAGTGTTCGCGTATTCTGGAAGCTTTTAGTCGCATCAATTGTGATGCTTGTAGGTGGTTACTTAGGCGAGACTCAAGTCCTTGGTGTTTCAGAAATGACTGGATTCATCATAGGTATGGTTGGTTGGCTCTACATCATCTATGAAATATTCAAAGGTGAAGCCTCCAAGCTTAATGCAAACAGTGGTAACATTGCCTCTCAAAATGCTTTCAAGACGATCCGTCTGATTGTAACTGTA LITVPLQIVEFYLILAAVTVVSVRVFWKLLVASIVMLVGGYLGETQVLGVSEMTGFIIGMVGWLYIIYEIFKGEASKLNANSGNIASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTCCCTCTACAAATCGTAGAGTTCTACTTGATCCTTGCTGCA---------GTT---ACCGTGGTAAGTGTT---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCAATTGTGATGCTTGTAGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGACTGGA---TTCATCATAGGTATGGTTGGTTGGCTCTACATCATCTATGAAATA---------------TTC------AAA---GGTGAAGCCTCCAAGCTTAATGCAAAC------AGT---GGTAACATTGCCTCT---CAA---AAT---GCT---TTC---AAG---ACGATC---CGTCTGATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASIVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MTG-FIIGMVGWLYIIYEI-----F--K-GEASKLNAN--S-GNIAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927780 [I-Planctomycetes-b] PRGD_OTU016_e618df41795729b90f9eb3aadc3b0c3c gb|KJ927780| PRGD_OTU016_e618df41795729b90f9eb3aadc3b0c3c, putative proteorhodopsin gene, partial cds. PRGD_OTU016_e618df41795729b90f9eb3aadc3b0c3c, putative proteorhodopsin gene, partial cds. KJ927780 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Indian Ocean (-33.28, 45.35) CTAATTACTGTCCCTCTACAAATCGTAGAGTTCTACTTGATCCTTGCTGCAGTTACCGTGGTAAGTGTACGTGTATTCTGGAAGCTTTTAGTCGCATCAATTGTGATGCTTGTAGGTGGTTACTTAGGTGAGACTCAAGTCCTTGGTGTTTCAGAAATGACTGGATTCATCATTGGTATGGTTGGATGGATCTTCATCATCTATTATGTCTTTTTTGGTGAAGCCTCTAAGCTTAATGCAAACAGTGGTAACATTGCCTCTCAAAATGCTTTCAAGACGATCCGTCTAATTGTAACTCTA LITVPLQIVEFYLILAAVTVVSVRVFWKLLVASIVMLVGGYLGETQVLGVSEMTGFIIGMVGWIFIIYYVFFGEASKLNANSGNIASQNAFKTIRLIVTL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTCCCTCTACAAATCGTAGAGTTCTACTTGATCCTTGCTGCA---------GTT---ACCGTGGTAAGTGTA---CGTGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCAATTGTGATGCTTGTAGGTGGTTACTTAGGTGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGACTGGA---TTCATCATTGGTATGGTTGGATGGATCTTCATCATCTATTATGTC---------------TTT------TTT---GGTGAAGCCTCTAAGCTTAATGCAAAC------AGT---GGTAACATTGCCTCT---CAA---AAT---GCT---TTC---AAG---ACGATC---CGTCTAATTGTAACTCTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASIVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MTG-FIIGMVGWIFIIYYV-----F--F-GEASKLNAN--S-GNIAS-Q-N-A-F-K-TI-RLIVTL-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927750 [I-Planctomycetes-b] PRGD_OTU016_483f0f8a41ea00fa019087abaa48ab6d gb|KJ927750| PRGD_OTU016_483f0f8a41ea00fa019087abaa48ab6d, putative proteorhodopsin gene, partial cds. PRGD_OTU016_483f0f8a41ea00fa019087abaa48ab6d, putative proteorhodopsin gene, partial cds. KJ927750 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTAATTACTGTCCCTCTCCAAATCGTAGAGTTTTACTTGATACTTGCTGCAGTTACCGTGGTCAGTGTACGCGTATTCTGGAAGCTTTTAGTTGCATCACTTGTGATGCTAGTAGGTGGTTACTTAGGCGAGACTCAAGTCCTTGGGGTGTCAGAAATGACTGGATTCATCATAGGCATGGTTGGATGGCTCTACATCATCTATGAAATCTTCAAAGGTGAAGCCTCCAAGCTTAATGCAAACAGTGGTAACATTGCATCCCAGAATGCTTTCAAGACGATACGTCTGATTGTAACTGTA LITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQVLGVSEMTGFIIGMVGWLYIIYEIFKGEASKLNANSGNIASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTTTACTTGATACTTGCTGCA---------GTT---ACCGTGGTCAGTGTA---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTTGCATCACTTGTGATGCTAGTAGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGG---GTG---------------------------------------------------------TCAGAA------------------ATGACTGGA---TTCATCATAGGCATGGTTGGATGGCTCTACATCATCTATGAAATC---------------TTC------AAA---GGTGAAGCCTCCAAGCTTAATGCAAAC------AGT---GGTAACATTGCATCC---CAG---AAT---GCT---TTC---AAG---ACGATA---CGTCTGATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MTG-FIIGMVGWLYIIYEI-----F--K-GEASKLNAN--S-GNIAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927783 [I-Planctomycetes-b] PRGD_OTU016_ef7ec72ba1f25c97462154c1eb336413 gb|KJ927783| PRGD_OTU016_ef7ec72ba1f25c97462154c1eb336413, putative proteorhodopsin gene, partial cds. PRGD_OTU016_ef7ec72ba1f25c97462154c1eb336413, putative proteorhodopsin gene, partial cds. KJ927783 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-14.48, 113.45) CTAATTACTGTCCCTCTCCAAATCGTAGAGTTTTACTTGATCCTTGCTGCAGTTACCGTGGTCAGTGTACGCGTATTCTGGAAGCTTTTAGTTGCATCACTTGTGATACTAGTGGGTGGTTACCTAGGCGAGACTCAAGTCCTTGGGGTGTCAGAAATGACTGGATTCATCATAGGCATGGTTGGATGGCTCTACATCATCTATGAAATCTTTGCAGGTGAAGCCTCCAAGCTTAATGCAAACAGTGGTAACATTGCCTCCCAAAATGCTTTCAAGACGATACGTCTGATTGTAACTGTA LITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVILVGGYLGETQVLGVSEMTGFIIGMVGWLYIIYEIFAGEASKLNANSGNIASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTTTACTTGATCCTTGCTGCA---------GTT---ACCGTGGTCAGTGTA---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTTGCATCACTTGTGATACTAGTGGGTGGTTACCTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGG---GTG---------------------------------------------------------TCAGAA------------------ATGACTGGA---TTCATCATAGGCATGGTTGGATGGCTCTACATCATCTATGAAATC---------------TTT------GCA---GGTGAAGCCTCCAAGCTTAATGCAAAC------AGT---GGTAACATTGCCTCC---CAA---AAT---GCT---TTC---AAG---ACGATA---CGTCTGATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVILVGGYLGE---T------Q--V-----------LG-V-------------------SE------MTG-FIIGMVGWLYIIYEI-----F--A-GEASKLNAN--S-GNIAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927768 [I-Planctomycetes-b] PRGD_OTU016_abc0319ccc4161456e99a8b240b7b7cf gb|KJ927768| PRGD_OTU016_abc0319ccc4161456e99a8b240b7b7cf, putative proteorhodopsin gene, partial cds. PRGD_OTU016_abc0319ccc4161456e99a8b240b7b7cf, putative proteorhodopsin gene, partial cds. KJ927768 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Indian Ocean (-33.28, 45.35) CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTGATCCTTGCTGCAGTCACCGTGGTAAGTGTTCGCGTATTCTGGAAGCTCTTAGTCGCATCCCTTGTCATGCTAGTAGGCGGTTACTTAGGCGAGACTCAAGTTCTTGGTGTTTCAGAAATGACTGGATTCATCATAGGCATGGTTGGATGGCTCTACATCATCTATGAAATCTTCAAAGGTGAAGCCTCCAAGCTTAATGCAAACAGTGGTAACCTTGCCTCTCAGAATGCTTTCAAGACGATCCGTCTGATTGTGACTGTA LITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQVLGVSEMTGFIIGMVGWLYIIYEIFKGEASKLNANSGNLASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTGATCCTTGCTGCA---------GTC---ACCGTGGTAAGTGTT---CGCGTA------------------------------------TTCTGGAAG---CTCTTAGTCGCATCCCTTGTCATGCTAGTAGGCGGTTACTTAGGCGAG---------ACT------------------CAA------GTT---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGACTGGA---TTCATCATAGGCATGGTTGGATGGCTCTACATCATCTATGAAATC---------------TTC------AAA---GGTGAAGCCTCCAAGCTTAATGCAAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATC---CGTCTGATTGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MTG-FIIGMVGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927776 [I-Planctomycetes-b] PRGD_OTU016_c7a34be6b6a2d8eff013074670f650b8 gb|KJ927776| PRGD_OTU016_c7a34be6b6a2d8eff013074670f650b8, putative proteorhodopsin gene, partial cds. PRGD_OTU016_c7a34be6b6a2d8eff013074670f650b8, putative proteorhodopsin gene, partial cds. KJ927776 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTAATTACTGTCCCTCTCCAAATCGTAGAGTTTTACTTAATCCTTGCTGCAGTTACCGTGGTCAGTGTGCGCGTCTTCTGGAAGCTCTTAGTCGCATCCCTTGTCATGCTAGTAGGCGGTTACTTAGGCGAGACTCAAGTTCTTGGTGTTTCAGAAATGACTGGATTCATCATAGGCATGGTTGGATGGCTCTACATCATCTATGAAATCTTCAAAGGTGAAGCCTCCAAGCTTAATGCAAACAGTGGTAACCTTGCCTCTCAGAATGCTTTCAAGACGATCCGTCTGATTGTGACTGTA LITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQVLGVSEMTGFIIGMVGWLYIIYEIFKGEASKLNANSGNLASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTTTACTTAATCCTTGCTGCA---------GTT---ACCGTGGTCAGTGTG---CGCGTC------------------------------------TTCTGGAAG---CTCTTAGTCGCATCCCTTGTCATGCTAGTAGGCGGTTACTTAGGCGAG---------ACT------------------CAA------GTT---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGACTGGA---TTCATCATAGGCATGGTTGGATGGCTCTACATCATCTATGAAATC---------------TTC------AAA---GGTGAAGCCTCCAAGCTTAATGCAAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATC---CGTCTGATTGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MTG-FIIGMVGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927782 [I-Planctomycetes-b] PRGD_OTU016_ecc353beb00400e959df1129beb992e6 gb|KJ927782| PRGD_OTU016_ecc353beb00400e959df1129beb992e6, putative proteorhodopsin gene, partial cds. PRGD_OTU016_ecc353beb00400e959df1129beb992e6, putative proteorhodopsin gene, partial cds. KJ927782 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), English Channel (48.7717, -3.9683) TTAATTACTGTCCCTCTTCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTGGTCAGTGTGAAAGTATTCTGGAAGCTCTTAGTCGCATCCCTTGTCATGCTAGTAGGCGGTTACTTAGGCGAGACTCAAGTTCTTGGTGTTTCAGAAATGACTGGATTCATCATTGGTATGGTTGGATGGATCTTCATCATCTATTATGTCTTTTTTGGTGAAGCCTCCAAGCTTAATGCAAACAGTGGTAACCTTGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTCACTGTA LITVPLQIVEFYLILAAVTVVSVKVFWKLLVASLVMLVGGYLGETQVLGVSEMTGFIIGMVGWIFIIYYVFFGEASKLNANSGNLASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTCCCTCTTCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTGGTCAGTGTG---AAAGTA------------------------------------TTCTGGAAG---CTCTTAGTCGCATCCCTTGTCATGCTAGTAGGCGGTTACTTAGGCGAG---------ACT------------------CAA------GTT---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGACTGGA---TTCATCATTGGTATGGTTGGATGGATCTTCATCATCTATTATGTC---------------TTT------TTT---GGTGAAGCCTCCAAGCTTAATGCAAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTCACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVSV-KV------------FWK-LLVASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MTG-FIIGMVGWIFIIYYV-----F--F-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927754 [I-Planctomycetes-b] PRGD_OTU016_5d658c0e5decdbd7f5fd31e382d83ce2 gb|KJ927754| PRGD_OTU016_5d658c0e5decdbd7f5fd31e382d83ce2, putative proteorhodopsin gene, partial cds. PRGD_OTU016_5d658c0e5decdbd7f5fd31e382d83ce2, putative proteorhodopsin gene, partial cds. KJ927754 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (76.3333, 14.8833) CTAATTACAGTCCCTCTCCAAATCGTAGAGTTCTACTTGATCCTTGCTGCAGTTACCGTGGTAAGTGTACGCGTATTCTGGAAGCTCTTGGTCGCATCACTTGTCATGCTAATAGGCGGTTACTTAGGCGAGACTCAAGTCCTTGGTGTTTCAGAAATGACTGGATTCATCATAGGTATGGTTGGATGGCTCTACATCATCTATGAAATCTTCAAAGGTGAAGCCTCCAAGCTTAATGCAAACAGTGGTAACCTTGCCTCTCAGAATGCTTTCAAGACGATCCGTCTGATTGTGACTGTA LITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLIGGYLGETQVLGVSEMTGFIIGMVGWLYIIYEIFKGEASKLNANSGNLASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTCCCTCTCCAAATCGTAGAGTTCTACTTGATCCTTGCTGCA---------GTT---ACCGTGGTAAGTGTA---CGCGTA------------------------------------TTCTGGAAG---CTCTTGGTCGCATCACTTGTCATGCTAATAGGCGGTTACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGACTGGA---TTCATCATAGGTATGGTTGGATGGCTCTACATCATCTATGAAATC---------------TTC------AAA---GGTGAAGCCTCCAAGCTTAATGCAAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATC---CGTCTGATTGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLIGGYLGE---T------Q--V-----------LG-V-------------------SE------MTG-FIIGMVGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927778 [I-Planctomycetes-b] PRGD_OTU016_e171cb36590eb1751b18af1f6d5ebcfe gb|KJ927778| PRGD_OTU016_e171cb36590eb1751b18af1f6d5ebcfe, putative proteorhodopsin gene, partial cds. PRGD_OTU016_e171cb36590eb1751b18af1f6d5ebcfe, putative proteorhodopsin gene, partial cds. KJ927778 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Indian Ocean (-23.5956, 69.0419) CTAATTACAGTCCCTCTCCAAATCGTAGAGTTCTATTTGATCCTTGCTGCAGTTACCGTGGTAAGTGTACGCGTATTCTGGAAGCTCTTAGTCGCATCACTTGTAATGCTAGTAGGCGGTTACTTAGGCGAAACTCAAGTCCTTGGTGTTTCAGAAATGACTGGATTCATCATAGGCATGGTTGGATGGCTCTACATCATCTATGAAATCTTCAAAGGTGAAGCCTCCAAGCTTAATGCAAACAGTGGTAATGTTGCCTCTCAGAATGCTTTCAAGACGATCCGTCTGATTGTGACTGTA LITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQVLGVSEMTGFIIGMVGWLYIIYEIFKGEASKLNANSGNVASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTCCCTCTCCAAATCGTAGAGTTCTATTTGATCCTTGCTGCA---------GTT---ACCGTGGTAAGTGTA---CGCGTA------------------------------------TTCTGGAAG---CTCTTAGTCGCATCACTTGTAATGCTAGTAGGCGGTTACTTAGGCGAA---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGACTGGA---TTCATCATAGGCATGGTTGGATGGCTCTACATCATCTATGAAATC---------------TTC------AAA---GGTGAAGCCTCCAAGCTTAATGCAAAC------AGT---GGTAATGTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATC---CGTCTGATTGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MTG-FIIGMVGWLYIIYEI-----F--K-GEASKLNAN--S-GNVAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927753 [I-Planctomycetes-b] PRGD_OTU016_587b7a068738592acb6f293f5889020e gb|KJ927753| PRGD_OTU016_587b7a068738592acb6f293f5889020e, putative proteorhodopsin gene, partial cds. PRGD_OTU016_587b7a068738592acb6f293f5889020e, putative proteorhodopsin gene, partial cds. KJ927753 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Indian Ocean (-23.5956, 69.0419) CTAATTACAGTCCCTCTCCAAATCGTAGAGTTCTACTTGATCCTTGCTGCAGTTACCGTGGTAAGTGTGCGCGTATTTTGGAAGCTTTTAGTCGCATCACTTGTGATGCTTGTAGGTGGTTACTTAGGCGAGACTCAAGTCCTTGGTGTTTCAGAAATGACTGGATTCATCATAGGTATGGTTGGATGGCTCTACATCATCTACGAAATCTTTAAAGGTGAAGCTTCCAAGCTTAATGCAAACAGTGGCAACATTGCCTCTCAGAATGCTTTCAAGACAATCCGTCTAATTGTAACTGTA LITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQVLGVSEMTGFIIGMVGWLYIIYEIFKGEASKLNANSGNIASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTCCCTCTCCAAATCGTAGAGTTCTACTTGATCCTTGCTGCA---------GTT---ACCGTGGTAAGTGTG---CGCGTA------------------------------------TTTTGGAAG---CTTTTAGTCGCATCACTTGTGATGCTTGTAGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGACTGGA---TTCATCATAGGTATGGTTGGATGGCTCTACATCATCTACGAAATC---------------TTT------AAA---GGTGAAGCTTCCAAGCTTAATGCAAAC------AGT---GGCAACATTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACAATC---CGTCTAATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MTG-FIIGMVGWLYIIYEI-----F--K-GEASKLNAN--S-GNIAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927761 [I-Planctomycetes-b] PRGD_OTU016_8d9fac82b8f8c8ba12c62644853d3a78 gb|KJ927761| PRGD_OTU016_8d9fac82b8f8c8ba12c62644853d3a78, putative proteorhodopsin gene, partial cds. PRGD_OTU016_8d9fac82b8f8c8ba12c62644853d3a78, putative proteorhodopsin gene, partial cds. KJ927761 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833) CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTGATCCTTGCTGCAGTTACCGTGGTAAGTGTACGCGTATTTTGGAAGCTTTTAGTCGCATCTCTTGTCATGCTAGTAGGTGGTTACTTAGGCGAGACTCAAGTCCTTGGTGTTTCAGAAATGACTGGATTCATCATAGGTATGGTTGGATGGCTCTACATCATCTACGAAATCTTTAAAGGTGAAGCTTCCAAGCTTAATGCAAACAGTGGTAACATTGCCTCTCAGAATGCTTTCAAGACGATCCGTCTAATTGTAACTGTA LITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQVLGVSEMTGFIIGMVGWLYIIYEIFKGEASKLNANSGNIASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTGATCCTTGCTGCA---------GTT---ACCGTGGTAAGTGTA---CGCGTA------------------------------------TTTTGGAAG---CTTTTAGTCGCATCTCTTGTCATGCTAGTAGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGACTGGA---TTCATCATAGGTATGGTTGGATGGCTCTACATCATCTACGAAATC---------------TTT------AAA---GGTGAAGCTTCCAAGCTTAATGCAAAC------AGT---GGTAACATTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATC---CGTCTAATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MTG-FIIGMVGWLYIIYEI-----F--K-GEASKLNAN--S-GNIAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927758 [I-Planctomycetes-b] PRGD_OTU016_7064d8b778f051d7889878498f1855ee gb|KJ927758| PRGD_OTU016_7064d8b778f051d7889878498f1855ee, putative proteorhodopsin gene, partial cds. PRGD_OTU016_7064d8b778f051d7889878498f1855ee, putative proteorhodopsin gene, partial cds. KJ927758 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683) CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTGGTAAGCGTACGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTAGGTGGTTACCTAGGCGAGACTCAAATCCTTGGTGTTTCAGAAATGACTGGATTCATCATAGGTATGGTCGGGTGGCTCTACATCATCTACGAAATCTTTAAAGGTGAAGCTTCCAAGCTTAATGCAAACAGTGGTAACATTGCCTCTCAAAATGCTTTCAAGACGATCCGTCTAATTGTAACTGTA LITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQILGVSEMTGFIIGMVGWLYIIYEIFKGEASKLNANSGNIASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTGGTAAGCGTA---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTAGGTGGTTACCTAGGCGAG---------ACT------------------CAA------ATC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGACTGGA---TTCATCATAGGTATGGTCGGGTGGCTCTACATCATCTACGAAATC---------------TTT------AAA---GGTGAAGCTTCCAAGCTTAATGCAAAC------AGT---GGTAACATTGCCTCT---CAA---AAT---GCT---TTC---AAG---ACGATC---CGTCTAATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--I-----------LG-V-------------------SE------MTG-FIIGMVGWLYIIYEI-----F--K-GEASKLNAN--S-GNIAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927742 [I-Planctomycetes-b] PRGD_OTU016_34d37cbd1c3d21269c74912507d652a9 gb|KJ927742| PRGD_OTU016_34d37cbd1c3d21269c74912507d652a9, putative proteorhodopsin gene, partial cds. PRGD_OTU016_34d37cbd1c3d21269c74912507d652a9, putative proteorhodopsin gene, partial cds. KJ927742 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Indian Ocean (-33.28, 45.35) CTAATTACGGTCCCTCTCCAAATCGTAGAGTTCTACTTGATCCTTGCTGCAGTCACCGTGGTAAGTGTACGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTAGGTGGTTACTTAGGCGAGACTCAAGTCCTTGGTGTGTCAGAAATGACTGGATTCATCGTAGGTATGGTTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGTGAGGCCTCTAAGCTTAATGCAAACAGTGGTAACATTGCCTCTCAGAATGCTTTCAAGACAATCCGTCTGATTGTAACTGTA LITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQVLGVSEMTGFIVGMVGWLYIIYEIFKGEASKLNANSGNIASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACGGTCCCTCTCCAAATCGTAGAGTTCTACTTGATCCTTGCTGCA---------GTC---ACCGTGGTAAGTGTA---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTAGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTG---------------------------------------------------------TCAGAA------------------ATGACTGGA---TTCATCGTAGGTATGGTTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAGGCCTCTAAGCTTAATGCAAAC------AGT---GGTAACATTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACAATC---CGTCTGATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MTG-FIVGMVGWLYIIYEI-----F--K-GEASKLNAN--S-GNIAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927765 [I-Planctomycetes-b] PRGD_OTU016_a91de40d34f6f4a2f97207ae5d4b5fbb gb|KJ927765| PRGD_OTU016_a91de40d34f6f4a2f97207ae5d4b5fbb, putative proteorhodopsin gene, partial cds. PRGD_OTU016_a91de40d34f6f4a2f97207ae5d4b5fbb, putative proteorhodopsin gene, partial cds. KJ927765 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833) CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTGATCCTTGCTGCAGTCACCGTGGTAAGTGTACGCGTATTCTGGAAGCTTTTAGTAGCATCACTTGTCATGCTAGTAGGTGGTTACTTAGGCGAGACTCAAGTCCTTGGTGTGTCAGAAATGACTGGATTCATCGTAGGTATGGTTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGTGAGGCCTCTAAGCTTAATGCAAACAGTGGTAACATTGCCTCTCAGAATGCTTTCAAGACAATCCGTCTGATTGTAACTTTA LITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQVLGVSEMTGFIVGMVGWLYIIYEIFKGEASKLNANSGNIASQNAFKTIRLIVTL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTGATCCTTGCTGCA---------GTC---ACCGTGGTAAGTGTA---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTAGCATCACTTGTCATGCTAGTAGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTG---------------------------------------------------------TCAGAA------------------ATGACTGGA---TTCATCGTAGGTATGGTTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAGGCCTCTAAGCTTAATGCAAAC------AGT---GGTAACATTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACAATC---CGTCTGATTGTAACTTTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MTG-FIVGMVGWLYIIYEI-----F--K-GEASKLNAN--S-GNIAS-Q-N-A-F-K-TI-RLIVTL-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927764 [I-Planctomycetes-b] PRGD_OTU016_a01b1f20d8ad4008df901bd54a1d0cf3 gb|KJ927764| PRGD_OTU016_a01b1f20d8ad4008df901bd54a1d0cf3, putative proteorhodopsin gene, partial cds. PRGD_OTU016_a01b1f20d8ad4008df901bd54a1d0cf3, putative proteorhodopsin gene, partial cds. KJ927764 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Indian Ocean (-35.05, 23.73; -33.28, 45.35) CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTGATCCTTGCTGCAGTCACCGTGGTAAGTGTTCGCGTATTCTGGAAGCTTTTAGTCGCATCACTCGTCATGCTAGTAGGTGGTTACTTGGGCGAGACTCAAGTCCTTGGTGTGTCAGAAATGACTGGATTCATCGTAGGTATGGTTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGTGAGGCCTCTAAGCTTAATGCAAACAGTGGTAACATTGCCTCTCAGAATGCTTTCAAGACGATCCGTCTGATTGTAACTGTA LITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQVLGVSEMTGFIVGMVGWLYIIYEIFKGEASKLNANSGNIASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTGATCCTTGCTGCA---------GTC---ACCGTGGTAAGTGTT---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTCGTCATGCTAGTAGGTGGTTACTTGGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTG---------------------------------------------------------TCAGAA------------------ATGACTGGA---TTCATCGTAGGTATGGTTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAGGCCTCTAAGCTTAATGCAAAC------AGT---GGTAACATTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATC---CGTCTGATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MTG-FIVGMVGWLYIIYEI-----F--K-GEASKLNAN--S-GNIAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927785 [I-Planctomycetes-b] PRGD_OTU016_fe68d34e9b7b9c63dec11859f5c9ddcf gb|KJ927785| PRGD_OTU016_fe68d34e9b7b9c63dec11859f5c9ddcf, putative proteorhodopsin gene, partial cds. PRGD_OTU016_fe68d34e9b7b9c63dec11859f5c9ddcf, putative proteorhodopsin gene, partial cds. KJ927785 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATTACTGTCCCTCTTCAAATCGTAGAGTTCTACTTGATCCTCGCTGCAGTTACCGTGGTCGGTGTTCGTGTATTCTGGAAGCTTTTGATCGCATCGCTTGTCATGCTTGTAGGTGGTTACCTAGGCGAGACTCAAGTCCTTGGTGTTTCAGAAATGACTGGATTCATTATAGGCATGGTTGGATGGCTCTACATCATCTATGAAATCTTCAAAGGTGAAGCCTCCAAGCTTAACGCTAACAGTGGTAACCTTGCCTCTCAGAATGCATTCAAGACGATCCGTCTGATTGTCACTGTA LITVPLQIVEFYLILAAVTVVGVRVFWKLLIASLVMLVGGYLGETQVLGVSEMTGFIIGMVGWLYIIYEIFKGEASKLNANSGNLASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTCCCTCTTCAAATCGTAGAGTTCTACTTGATCCTCGCTGCA---------GTT---ACCGTGGTCGGTGTT---CGTGTA------------------------------------TTCTGGAAG---CTTTTGATCGCATCGCTTGTCATGCTTGTAGGTGGTTACCTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGACTGGA---TTCATTATAGGCATGGTTGGATGGCTCTACATCATCTATGAAATC---------------TTC------AAA---GGTGAAGCCTCCAAGCTTAACGCTAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCA---TTC---AAG---ACGATC---CGTCTGATTGTCACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVGV-RV------------FWK-LLIASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MTG-FIIGMVGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927784 [I-Planctomycetes-b] PRGD_OTU016_f34de611ad74375bf8c48b4bf2f1c52b gb|KJ927784| PRGD_OTU016_f34de611ad74375bf8c48b4bf2f1c52b, putative proteorhodopsin gene, partial cds. PRGD_OTU016_f34de611ad74375bf8c48b4bf2f1c52b, putative proteorhodopsin gene, partial cds. KJ927784 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683) CTGATTACTGTACCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTCACCGTGGTGAGTGTGCGCGTACTCTGGAAGCTTCTAGTCGCATCACTTGTCATGCTAGTAGGTGGTTACTTAGGCGAGACTCAACTACTTGGTGTTTCAGAAACGACTGGATTCATCATAGGCATGGTTGGATGGCTCTACATCATCTATGAAATCTTCAAAGGTGAAGCCTCCAAGCTTAATGCAAACAGTGGTAACATTGCCTCCCAGAATGCTTTCAAGACGATACGTCTGATTGTCACATTT LITVPLQIVEFYLILAAVTVVSVRVLWKLLVASLVMLVGGYLGETQLLGVSETTGFIIGMVGWLYIIYEIFKGEASKLNANSGNIASQNAFKTIRLIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTACCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTC---ACCGTGGTGAGTGTG---CGCGTA------------------------------------CTCTGGAAG---CTTCTAGTCGCATCACTTGTCATGCTAGTAGGTGGTTACTTAGGCGAG---------ACT------------------CAA------CTA---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ACGACTGGA---TTCATCATAGGCATGGTTGGATGGCTCTACATCATCTATGAAATC---------------TTC------AAA---GGTGAAGCCTCCAAGCTTAATGCAAAC------AGT---GGTAACATTGCCTCC---CAG---AAT---GCT---TTC---AAG---ACGATA---CGTCTGATTGTCACATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVSV-RV------------LWK-LLVASLVMLVGGYLGE---T------Q--L-----------LG-V-------------------SE------TTG-FIIGMVGWLYIIYEI-----F--K-GEASKLNAN--S-GNIAS-Q-N-A-F-K-TI-RLIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927738 [I-Planctomycetes-b] PRGD_OTU016_24c5002b99f04887962dd918dc83ae13 gb|KJ927738| PRGD_OTU016_24c5002b99f04887962dd918dc83ae13, putative proteorhodopsin gene, partial cds. PRGD_OTU016_24c5002b99f04887962dd918dc83ae13, putative proteorhodopsin gene, partial cds. KJ927738 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683) CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTGACCGCGGTCAGTGTGCGCGTCTTCTGGAAGCTTTTAGCCGCATCACTTGTCATGCTAGTGGGCGGTTACTTAGGCGAGACTCAAGTCCTTGGGTTTGTTTCAGAAATGACTGGATTCATCATTGGTATGGTTGGATGGCTCTGGATCATCTATGAAATCTTTGCAGGTGAAGCCTCCAAGCTTAACGCAAACAGTGGTAACATTGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTCACTGTA LITVPLQIVEFYLILAAVTAVSVRVFWKLLAASLVMLVGGYLGETQVLGFVSEMTGFIIGMVGWLWIIYEIFAGEASKLNANSGNIASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTG---ACCGCGGTCAGTGTG---CGCGTC------------------------------------TTCTGGAAG---CTTTTAGCCGCATCACTTGTCATGCTAGTGGGCGGTTACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGGTTTGTT---------------------------------------------------------TCAGAA------------------ATGACTGGA---TTCATCATTGGTATGGTTGGATGGCTCTGGATCATCTATGAAATC---------------TTT------GCA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGT---GGTAACATTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTCACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVSV-RV------------FWK-LLAASLVMLVGGYLGE---T------Q--V-----------LGFV-------------------SE------MTG-FIIGMVGWLWIIYEI-----F--A-GEASKLNAN--S-GNIAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927759 [I-Planctomycetes-b] PRGD_OTU016_76e44eaa05bd828be7ffa2ef85b9c44f gb|KJ927759| PRGD_OTU016_76e44eaa05bd828be7ffa2ef85b9c44f, putative proteorhodopsin gene, partial cds. PRGD_OTU016_76e44eaa05bd828be7ffa2ef85b9c44f, putative proteorhodopsin gene, partial cds. KJ927759 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175) CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTATCATGCTAGTGGGTGGTTACTTAGGCGAGACTCAAGTCCTTGGTGTTTCAGAAATGGCTGGATTCATCGTCGGTATGGCTGGATGGCTCTACATTATTTTTGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGTGGTAACCTTGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTCACTTTT LITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLIMLVGGYLGETQVLGVSEMAGFIVGMAGWLYIIFEIFKGEASKLNANSGNLASQNAFKTIRLIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTATCATGCTAGTGGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGCTGGA---TTCATCGTCGGTATGGCTGGATGGCTCTACATTATTTTTGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTCACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLIMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MAG-FIVGMAGWLYIIFEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927760 [I-Planctomycetes-b] PRGD_OTU016_7cbc29d198c8fa53171730c758feee1b gb|KJ927760| PRGD_OTU016_7cbc29d198c8fa53171730c758feee1b, putative proteorhodopsin gene, partial cds. PRGD_OTU016_7cbc29d198c8fa53171730c758feee1b, putative proteorhodopsin gene, partial cds. KJ927760 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (33.762, 29.175), Indian Ocean (-23.5956, 69.0419) CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTATCATGCTAGTGGGTGGTTACTTAGGCGAGACTCAAGTCCTTGGTGTTTCAGAAATGGCTGGATTCATCGTCGGTATGATTGGATGGCTCTACATTATTTTTGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGTGGTAACCTTGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTCACTTTT LITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLIMLVGGYLGETQVLGVSEMAGFIVGMIGWLYIIFEIFKGEASKLNANSGNLASQNAFKTIRLIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTATCATGCTAGTGGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGCTGGA---TTCATCGTCGGTATGATTGGATGGCTCTACATTATTTTTGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTCACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLIMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MAG-FIVGMIGWLYIIFEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927756 [I-Planctomycetes-b] PRGD_OTU016_5ee37bbedb4070a2d14e193489d03f42 gb|KJ927756| PRGD_OTU016_5ee37bbedb4070a2d14e193489d03f42, putative proteorhodopsin gene, partial cds. PRGD_OTU016_5ee37bbedb4070a2d14e193489d03f42, putative proteorhodopsin gene, partial cds. KJ927756 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175) CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTATCATGCTAGTGGGTGGTTACTTAGGCGAGACTCAAGTCCTTGGTGTTTCAGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATTATTTTTGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGTGGTAACCTTGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTCACTTTT LITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLIMLVGGYLGETQVLGVSEMVGFIIGMAGWLYIIFEIFKGEASKLNANSGNLASQNAFKTIRLIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTATCATGCTAGTGGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATTATTTTTGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTCACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLIMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIFEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927735 [I-Planctomycetes-b] PRGD_OTU016_045655aad119d7848e197a5f06acf84b gb|KJ927735| PRGD_OTU016_045655aad119d7848e197a5f06acf84b, putative proteorhodopsin gene, partial cds. PRGD_OTU016_045655aad119d7848e197a5f06acf84b, putative proteorhodopsin gene, partial cds. KJ927735 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45; -33.28, 45.35) CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAGACTCAAGTCCTTGGTGTTTCAGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATTATTTTTGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGTGGTAACCTTGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTCACTGTA LITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQVLGVSEMVGFIIGMAGWLYIIFEIFKGEASKLNANSGNLASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATTATTTTTGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTCACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIFEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927762 [I-Planctomycetes-b] PRGD_OTU016_9afde5748be9117fb1c78a0ae4d85994 gb|KJ927762| PRGD_OTU016_9afde5748be9117fb1c78a0ae4d85994, putative proteorhodopsin gene, partial cds. PRGD_OTU016_9afde5748be9117fb1c78a0ae4d85994, putative proteorhodopsin gene, partial cds. KJ927762 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Pacific side (72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAGACTCAAGTCCTTGGTGTTTCAGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGTGAAGCCTCCAAGCTTAACGCAAACAGTGGTAACCTTGCCTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTCACTGTA LITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLVGGYLGETQVLGVSEMVGFIIGMAGWLYIIYEIFKGEASKLNANSGNLASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGT---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTCACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927744 [I-Planctomycetes-b] PRGD_OTU016_4188a204d62776018a956be34bff07df gb|KJ927744| PRGD_OTU016_4188a204d62776018a956be34bff07df, putative proteorhodopsin gene, partial cds. PRGD_OTU016_4188a204d62776018a956be34bff07df, putative proteorhodopsin gene, partial cds. KJ927744 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTGGTGTGCGCGTATTCTGGAAGCTCCTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACCTAGGCGAGACTCAAGTCCTTGGTGTTTCTGAAATGTTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTGCAGGTGAAGCCTCCAAGCTTAACGCAAACAGCGGTAACCTTGCCTCTCAGAATGCTTTCAAGACGATCCGTCTGATTGTCACTGTA LITVPLQIVEFYLILAAVTVVGVRVFWKLLVASLVMLVGGYLGETQVLGVSEMFGFIIGMAGWLYIIYEIFAGEASKLNANSGNLASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTGGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTCCTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACCTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCTGAA------------------ATGTTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------GCA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGC---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATC---CGTCTGATTGTCACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVGV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MFG-FIIGMAGWLYIIYEI-----F--A-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927774 [I-Planctomycetes-b] PRGD_OTU016_bf58e43154fbf737f3f984463f15e0ab gb|KJ927774| PRGD_OTU016_bf58e43154fbf737f3f984463f15e0ab, putative proteorhodopsin gene, partial cds. PRGD_OTU016_bf58e43154fbf737f3f984463f15e0ab, putative proteorhodopsin gene, partial cds. KJ927774 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937), Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Indian Ocean (-33.28, 45.35) CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTGGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAGACTCAAGTCCTTGGTGTTTCTGAAATGTTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTGCAGGTGAAGCCTCCAAGCTTAACGCAAACAGCGGTAACCTTGCCTCTCAGAATGCTTTCAAGACGATCCGTCTGATTGTCACTGTA LITVPLQIVEFYLILAAVTVVGVRVFWKLLVASLVMLVGGYLGETQVLGVSEMFGFIIGMAGWLYIIYEIFAGEASKLNANSGNLASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTGGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTAGTGGGTGGTTACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCTGAA------------------ATGTTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------GCA---GGTGAAGCCTCCAAGCTTAACGCAAAC------AGC---GGTAACCTTGCCTCT---CAG---AAT---GCT---TTC---AAG---ACGATC---CGTCTGATTGTCACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVGV-RV------------FWK-LLVASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MFG-FIIGMAGWLYIIYEI-----F--A-GEASKLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927737 [I-Planctomycetes-b] PRGD_OTU016_094b4129a8779261fe997169c216234b gb|KJ927737| PRGD_OTU016_094b4129a8779261fe997169c216234b, putative proteorhodopsin gene, partial cds. PRGD_OTU016_094b4129a8779261fe997169c216234b, putative proteorhodopsin gene, partial cds. KJ927737 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTGATCCTTGCTGCAGTTACCGTAGTCAGTGTGCGCGTATTCTGGAAGCTTCTAATCGCATCACTAGTCATGCTTTTAGGTGGTTACTTAGGCGAGACTCAACTTGTGCCATCAATGGCTGGATTCATCATTGGTATGGCTGGCTGGCTCTACATCATCTATGAAATCTTTAAAGGCGAAGCCTCCCAGCTTAATGAAAATAGTGGTAACCTAGCTTCTCAAAATGCTTTCAAGACAATTCGTCTGATTGTCACTGTA LITVPLQIVEFYLILAAVTVVSVRVFWKLLIASLVMLLGGYLGETQLVPSMAGFIIGMAGWLYIIYEIFKGEASQLNENSGNLASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTGATCCTTGCTGCA---------GTT---ACCGTAGTCAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTCTAATCGCATCACTAGTCATGCTTTTAGGTGGTTACTTAGGCGAG---------ACT------------------CAA------CTT---------------------------------GTG------------------------------------------------------------------CCATCA------------------ATGGCTGGA---TTCATCATTGGTATGGCTGGCTGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGCGAAGCCTCCCAGCTTAATGAAAAT------AGT---GGTAACCTAGCTTCT---CAA---AAT---GCT---TTC---AAG---ACAATT---CGTCTGATTGTCACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLIASLVMLLGGYLGE---T------Q--L-----------V----------------------PS------MAG-FIIGMAGWLYIIYEI-----F--K-GEASQLNEN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927751 [I-Planctomycetes-b] PRGD_OTU016_5474c062cfbb478d2474da44a76fc92a gb|KJ927751| PRGD_OTU016_5474c062cfbb478d2474da44a76fc92a, putative proteorhodopsin gene, partial cds. PRGD_OTU016_5474c062cfbb478d2474da44a76fc92a, putative proteorhodopsin gene, partial cds. KJ927751 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) TTAATTACTGTCCCTCTGCAAATCGTAGAGTTCTACTTGATCCTTGCTGCAGTTACCGTGGTCGGTGTTCGCGTATTCTGGAAGCTTTTAGTCGCATCAATTGTCATGCTATTAGGTGGTTACCTAGGCGAGACTCAACTTGTGCCAGCAATGGCTGGATTCATCATTGGTATGGCTGGCTGGCTCTACATCATCTATGAAATCTTTAAAGGCGAAGCCTCCCAACTTAATGAAAATAGTGGTAACCTAGCTTCTCAAAATGCTTTCAAGACAATTCGTCTGATTGTCACTGTA LITVPLQIVEFYLILAAVTVVGVRVFWKLLVASIVMLLGGYLGETQLVPAMAGFIIGMAGWLYIIYEIFKGEASQLNENSGNLASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTCCCTCTGCAAATCGTAGAGTTCTACTTGATCCTTGCTGCA---------GTT---ACCGTGGTCGGTGTT---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCAATTGTCATGCTATTAGGTGGTTACCTAGGCGAG---------ACT------------------CAA------CTT---------------------------------GTG------------------------------------------------------------------CCAGCA------------------ATGGCTGGA---TTCATCATTGGTATGGCTGGCTGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGCGAAGCCTCCCAACTTAATGAAAAT------AGT---GGTAACCTAGCTTCT---CAA---AAT---GCT---TTC---AAG---ACAATT---CGTCTGATTGTCACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVGV-RV------------FWK-LLVASIVMLLGGYLGE---T------Q--L-----------V----------------------PA------MAG-FIIGMAGWLYIIYEI-----F--K-GEASQLNEN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927733 [I-Planctomycetes-b] PRGD_OTU016_otuREP_b7e0e40848fa742d7040897e419498a8 gb|KJ927733| PRGD_OTU016_otuREP_b7e0e40848fa742d7040897e419498a8, putative proteorhodopsin gene, partial cds. PRGD_OTU016_otuREP_b7e0e40848fa742d7040897e419498a8, putative proteorhodopsin gene, partial cds. KJ927733 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTGATCCTTGCTGCAGTTACCGTGGTCGGTGTTCGCGTATTCTGGAAGCTCCTAGTCGCATCACTTGTCATGCTATTGGGTGGATACTTAGGCGAGACTCAACTTTTGCCATCAATGGCTGGATTCGTCATTGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGCGAAGCCTCCCAGCTTAATGAAAATAGTGGTAACCTAGCTTCTCAGAATGCTTTCAAGACAATTCGTCTGATTGTCACTGTA LITVPLQIVEFYLILAAVTVVGVRVFWKLLVASLVMLLGGYLGETQLLPSMAGFVIGMAGWLYIIYEIFKGEASQLNENSGNLASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTGATCCTTGCTGCA---------GTT---ACCGTGGTCGGTGTT---CGCGTA------------------------------------TTCTGGAAG---CTCCTAGTCGCATCACTTGTCATGCTATTGGGTGGATACTTAGGCGAG---------ACT------------------CAA------CTT---------------------------------TTG------------------------------------------------------------------CCATCA------------------ATGGCTGGA---TTCGTCATTGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGCGAAGCCTCCCAGCTTAATGAAAAT------AGT---GGTAACCTAGCTTCT---CAG---AAT---GCT---TTC---AAG---ACAATT---CGTCTGATTGTCACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVGV-RV------------FWK-LLVASLVMLLGGYLGE---T------Q--L-----------L----------------------PS------MAG-FVIGMAGWLYIIYEI-----F--K-GEASQLNEN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927767 [I-Planctomycetes-b] PRGD_OTU016_abb73b6a52ba2f13b805055fd04ff018 gb|KJ927767| PRGD_OTU016_abb73b6a52ba2f13b805055fd04ff018, putative proteorhodopsin gene, partial cds. PRGD_OTU016_abb73b6a52ba2f13b805055fd04ff018, putative proteorhodopsin gene, partial cds. KJ927767 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-14.48, 113.45) CTAATTACTGTCCCTCTCCAAATTGTAGAGTTCTATTTAATCCTTGCTGCAGTTACAGTTGTTAGTGTGCGCGTATTCTGGAAGCTTTTAGTCGCATCACTTGTCATGCTATTGGGTGGATACTTAGGCGAGACTCAAGTCCTTGGTGTTTCAGAAATGGTTGGATTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTTAAAGGCGAAGCTTCCCAGCTTAATGAAAATAGTGGTAACCTAGCTTCTCAGAATGCTTTCAAGACCATTCGTCTGATTGTCACTGTA LITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLLGGYLGETQVLGVSEMVGFIIGMAGWLYIIYEIFKGEASQLNENSGNLASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTCCCTCTCCAAATTGTAGAGTTCTATTTAATCCTTGCTGCA---------GTT---ACAGTTGTTAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGTCGCATCACTTGTCATGCTATTGGGTGGATACTTAGGCGAG---------ACT------------------CAA------GTC---------------------------------CTTGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGTTGGA---TTCATCATAGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGCGAAGCTTCCCAGCTTAATGAAAAT------AGT---GGTAACCTAGCTTCT---CAG---AAT---GCT---TTC---AAG---ACCATT---CGTCTGATTGTCACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLLGGYLGE---T------Q--V-----------LG-V-------------------SE------MVG-FIIGMAGWLYIIYEI-----F--K-GEASQLNEN--S-GNLAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ929629 [I-Planctomycetes-b] PRGD_OTU175_otuREP_de0481d4e48470b3345a3c3b36637103 gb|KJ929629| PRGD_OTU175_otuREP_de0481d4e48470b3345a3c3b36637103, putative proteorhodopsin gene, partial cds. PRGD_OTU175_otuREP_de0481d4e48470b3345a3c3b36637103, putative proteorhodopsin gene, partial cds. KJ929629 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175) CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTGGTGCGAAGGTATTCTGGAAGCTTTTAGGATACTCACTTATAATGCTTGTCGGTGGTTACTTAGGCGAGACTCAACTTGTGCCAGCAATGGCTGGATTCATCGTCGGTATGATTGGATGGCTCCTCATCATCTGGGAAATCTTTAAAGGCGATGCCTCCCAGCTTAACGCAAACAGCGGTAACCTAGCTTCTCAGAATGCTTTCAAGACGATCCGTCTAATTGTCACATTT LITVPLQIVEFYLILAAVTVVGAKVFWKLLGYSLIMLVGGYLGETQLVPAMAGFIVGMIGWLLIIWEIFKGDASQLNANSGNLASQNAFKTIRLIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTGGTGCG---AAGGTA------------------------------------TTCTGGAAG---CTTTTAGGATACTCACTTATAATGCTTGTCGGTGGTTACTTAGGCGAG---------ACT------------------CAA------CTT---------------------------------GTG------------------------------------------------------------------CCAGCA------------------ATGGCTGGA---TTCATCGTCGGTATGATTGGATGGCTCCTCATCATCTGGGAAATC---------------TTT------AAA---GGCGATGCCTCCCAGCTTAACGCAAAC------AGC---GGTAACCTAGCTTCT---CAG---AAT---GCT---TTC---AAG---ACGATC---CGTCTAATTGTCACATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVGA-KV------------FWK-LLGYSLIMLVGGYLGE---T------Q--L-----------V----------------------PA------MAG-FIVGMIGWLLIIWEI-----F--K-GDASQLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ929630 [I-Planctomycetes-b] PRGD_OTU175_df553d994a9c0744aaedde1b6bc4ab2a gb|KJ929630| PRGD_OTU175_df553d994a9c0744aaedde1b6bc4ab2a, putative proteorhodopsin gene, partial cds. PRGD_OTU175_df553d994a9c0744aaedde1b6bc4ab2a, putative proteorhodopsin gene, partial cds. KJ929630 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175) CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTGGTGCGAAGGTATTCTGGAAGCTTTTAGGATACTCACTTATAATGCTTGTCGGTGGTTACTTAGGCGAGACTCAACTTGTGCCAGCAATGGCTGGATTCATCGTCGGTATGATTGGATGGCTCCTCATCATCTGGGAAATCTTTAAAGGCGATGCCTCCCAGCTTAACGCAAACAGCGGTAACCTAGCTTCTCAGAATGCTTTCAAGACGATTCGTCTGATTGTCACATTT LITVPLQIVEFYLILAAVTVVGAKVFWKLLGYSLIMLVGGYLGETQLVPAMAGFIVGMIGWLLIIWEIFKGDASQLNANSGNLASQNAFKTIRLIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTGGTGCG---AAGGTA------------------------------------TTCTGGAAG---CTTTTAGGATACTCACTTATAATGCTTGTCGGTGGTTACTTAGGCGAG---------ACT------------------CAA------CTT---------------------------------GTG------------------------------------------------------------------CCAGCA------------------ATGGCTGGA---TTCATCGTCGGTATGATTGGATGGCTCCTCATCATCTGGGAAATC---------------TTT------AAA---GGCGATGCCTCCCAGCTTAACGCAAAC------AGC---GGTAACCTAGCTTCT---CAG---AAT---GCT---TTC---AAG---ACGATT---CGTCTGATTGTCACATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVGA-KV------------FWK-LLGYSLIMLVGGYLGE---T------Q--L-----------V----------------------PA------MAG-FIVGMIGWLLIIWEI-----F--K-GDASQLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ929631 [I-Planctomycetes-b] PRGD_OTU175_f4ddc687fef1696848981974d2a9ea94 gb|KJ929631| PRGD_OTU175_f4ddc687fef1696848981974d2a9ea94, putative proteorhodopsin gene, partial cds. PRGD_OTU175_f4ddc687fef1696848981974d2a9ea94, putative proteorhodopsin gene, partial cds. KJ929631 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508) CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCAGTTACCGTTGTTGGTGCGAAGGTATTCTGGAAGCTTTTAGGATACTCACTTATAATGCTTGTCGGTGGTTACTTAGGCGAGACTCAACTTGTGCCATCATTGTTTGGATTCGGCATTGGTATGCTTGGATGGCTCCTCATCATCTGGGAAATCTTTAAAGGCGATGCCTCCCAGCTTAACGCAAACAGCGGTAACCTAGCTTCTCAGAATGCTTTCAAGACGATCCGTCTAATTGTCACATTT LITVPLQIVEFYLILAAVTVVGAKVFWKLLGYSLIMLVGGYLGETQLVPSLFGFGIGMLGWLLIIWEIFKGDASQLNANSGNLASQNAFKTIRLIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAGTTCTACTTAATCCTTGCTGCA---------GTT---ACCGTTGTTGGTGCG---AAGGTA------------------------------------TTCTGGAAG---CTTTTAGGATACTCACTTATAATGCTTGTCGGTGGTTACTTAGGCGAG---------ACT------------------CAA------CTT---------------------------------GTG------------------------------------------------------------------CCATCA------------------TTGTTTGGA---TTCGGCATTGGTATGCTTGGATGGCTCCTCATCATCTGGGAAATC---------------TTT------AAA---GGCGATGCCTCCCAGCTTAACGCAAAC------AGC---GGTAACCTAGCTTCT---CAG---AAT---GCT---TTC---AAG---ACGATC---CGTCTAATTGTCACATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVGA-KV------------FWK-LLGYSLIMLVGGYLGE---T------Q--L-----------V----------------------PS------LFG-FGIGMLGWLLIIWEI-----F--K-GDASQLNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ929911 [I-Planctomycetes-b] PRGD_OTU362_otuREP_be8cda296e797e680845e4eefe46e533 gb|KJ929911| PRGD_OTU362_otuREP_be8cda296e797e680845e4eefe46e533, putative proteorhodopsin gene, partial cds. PRGD_OTU362_otuREP_be8cda296e797e680845e4eefe46e533, putative proteorhodopsin gene, partial cds. KJ929911 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683) CTAATTACAGTTCCTCTCCAAATCGTAGAGTTCTACGTGATCCTTGCTGCGGTTACCGTGGTCAGTGTGCGCGTATTCTGGAAGCTTTTAGCATACTCACTTATAATGCTTGTAGGTGGTTACTTGGGCGAGGCTGAACTTATACCAGCAATGCTTGGATTCGTCATCGGTATGGTTGGATGGCTCTTCATCATCTATGAAATATTTGCAGGTGATGCCTCCAAGCTTAACGCAAACAGCGGTAACCTTGCCTCTCAGAAAGCTTTCAAGACGATCCGTAATATTGTCACATTT LITVPLQIVEFYVILAAVTVVSVRVFWKLLAYSLIMLVGGYLGEAELIPAMLGFVIGMVGWLFIIYEIFAGDASKLNANSGNLASQKAFKTIRNIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTTCCTCTCCAAATCGTAGAGTTCTACGTGATCCTTGCTGCG---------GTT---ACCGTGGTCAGTGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAGCATACTCACTTATAATGCTTGTAGGTGGTTACTTGGGCGAG---------GCT------------------GAA------CTT------------------------------------------ATA---------------------------------------------------------CCAGCA------------------ATGCTTGGA---TTCGTCATCGGTATGGTTGGATGGCTCTTCATCATCTATGAAATA---------------TTT------GCA---GGTGATGCCTCCAAGCTTAACGCAAAC------AGC---GGTAACCTTGCCTCT---CAG---AAA---GCT---TTC---AAG---ACGATC---CGTAATATTGTCACATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---V-TVVSV-RV------------FWK-LLAYSLIMLVGGYLGE---A------E--L--------------I-------------------PA------MLG-FVIGMVGWLFIIYEI-----F--A-GDASKLNAN--S-GNLAS-Q-K-A-F-K-TI-RNIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927736 [I-Planctomycetes-b] PRGD_OTU016_0868121e0cfdca7f89b6c405da21237e gb|KJ927736| PRGD_OTU016_0868121e0cfdca7f89b6c405da21237e, putative proteorhodopsin gene, partial cds. PRGD_OTU016_0868121e0cfdca7f89b6c405da21237e, putative proteorhodopsin gene, partial cds. KJ927736 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATTACTGTCCCTCTTCAAATCGTAGAGTTCTACTTGATCCTTGCTGCTGTTACTGCAGTGAGTGCACGCGTTTTCTGGAAACTTCTAGGCGCATCACTAGTGATGCTATTAGGTGGTTACTTAGGTGAGACTGGTGTACTTGGCGTTTCAGAAATGTTTGGATTTGTAGTTGGTATGGCTGGATGGCTTTATATCATCTATGAAATCTTCAAAGGCGAAGCCTCCCAGCTTAATGAGAACAGCGGAAACGTTGCGTCCCAGAATGCTTTCAAAACTATCCGTCTGATTGTAACTGTA LITVPLQIVEFYLILAAVTAVSARVFWKLLGASLVMLLGGYLGETGVLGVSEMFGFVVGMAGWLYIIYEIFKGEASQLNENSGNVASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTCCCTCTTCAAATCGTAGAGTTCTACTTGATCCTTGCTGCT---------GTT---ACTGCAGTGAGTGCA---CGCGTT------------------------------------TTCTGGAAA---CTTCTAGGCGCATCACTAGTGATGCTATTAGGTGGTTACTTAGGTGAG---------ACT------------------GGT------GTA---------------------------------CTTGGC---GTT---------------------------------------------------------TCAGAA------------------ATGTTTGGA---TTTGTAGTTGGTATGGCTGGATGGCTTTATATCATCTATGAAATC---------------TTC------AAA---GGCGAAGCCTCCCAGCTTAATGAGAAC------AGC---GGAAACGTTGCGTCC---CAG---AAT---GCT---TTC---AAA---ACTATC---CGTCTGATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVSA-RV------------FWK-LLGASLVMLLGGYLGE---T------G--V-----------LG-V-------------------SE------MFG-FVVGMAGWLYIIYEI-----F--K-GEASQLNEN--S-GNVAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927749 [I-Planctomycetes-b] PRGD_OTU016_48272ba0ece04c1b324e3df0f85c9e45 gb|KJ927749| PRGD_OTU016_48272ba0ece04c1b324e3df0f85c9e45, putative proteorhodopsin gene, partial cds. PRGD_OTU016_48272ba0ece04c1b324e3df0f85c9e45, putative proteorhodopsin gene, partial cds. KJ927749 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATTACTGTCCCTCTTCAAATCGTAGAATTCTACTTGATCCTTGCTGCTGTTACTGCAGTGAGTGCACGCGTTTTCTGGAAACTTCTAGGGGCATCACTAGTGATGCTGTTAGGTGGTTACCTAGGCGAGACTGGTGTACTTGGCGTTTCAGAAATGCTTGGATTTGTAGTTGGTATGGCTGGATGGCTTTATATCATCTATGAAATCTTTAAAGGCGAAGCCTCCCAGCTTAATGAGAACAGCGGAAACGTTGCATCCCAGAATGCTTTCAAAACTATCCGTCTGATTGTAACTGTA LITVPLQIVEFYLILAAVTAVSARVFWKLLGASLVMLLGGYLGETGVLGVSEMLGFVVGMAGWLYIIYEIFKGEASQLNENSGNVASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTCCCTCTTCAAATCGTAGAATTCTACTTGATCCTTGCTGCT---------GTT---ACTGCAGTGAGTGCA---CGCGTT------------------------------------TTCTGGAAA---CTTCTAGGGGCATCACTAGTGATGCTGTTAGGTGGTTACCTAGGCGAG---------ACT------------------GGT------GTA---------------------------------CTTGGC---GTT---------------------------------------------------------TCAGAA------------------ATGCTTGGA---TTTGTAGTTGGTATGGCTGGATGGCTTTATATCATCTATGAAATC---------------TTT------AAA---GGCGAAGCCTCCCAGCTTAATGAGAAC------AGC---GGAAACGTTGCATCC---CAG---AAT---GCT---TTC---AAA---ACTATC---CGTCTGATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVSA-RV------------FWK-LLGASLVMLLGGYLGE---T------G--V-----------LG-V-------------------SE------MLG-FVVGMAGWLYIIYEI-----F--K-GEASQLNEN--S-GNVAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927773 [I-Planctomycetes-b] PRGD_OTU016_b6366a733d0a70d2bf5cc59c1d5d6382 gb|KJ927773| PRGD_OTU016_b6366a733d0a70d2bf5cc59c1d5d6382, putative proteorhodopsin gene, partial cds. PRGD_OTU016_b6366a733d0a70d2bf5cc59c1d5d6382, putative proteorhodopsin gene, partial cds. KJ927773 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) CTAATTACTGTCCCTCTTCAAATCGTAGAGTTCTACTTGATCCTTGCTGCTGTTACTACAGTGAGTGCACGCGTTTTCTGGAAACTTCTAGTGGCATCACTCGTGATGCTGTTAGGTGGTTACTTAGGTGAGACTGGTGTACTTGGCGTTTCAGAAATGTTTGGATTTGTAGTTGGTATGGCTGGATGGCTTTATATCATCTATGAAATCTTCAAAGGCGAAGCCTCCCAGCTTAATGAGAACAGCGGAAACGTTGCATCTCAGAATGCTTTCAAAACTATCCGTCTGATTGTAACTGTA LITVPLQIVEFYLILAAVTTVSARVFWKLLVASLVMLLGGYLGETGVLGVSEMFGFVVGMAGWLYIIYEIFKGEASQLNENSGNVASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTCCCTCTTCAAATCGTAGAGTTCTACTTGATCCTTGCTGCT---------GTT---ACTACAGTGAGTGCA---CGCGTT------------------------------------TTCTGGAAA---CTTCTAGTGGCATCACTCGTGATGCTGTTAGGTGGTTACTTAGGTGAG---------ACT------------------GGT------GTA---------------------------------CTTGGC---GTT---------------------------------------------------------TCAGAA------------------ATGTTTGGA---TTTGTAGTTGGTATGGCTGGATGGCTTTATATCATCTATGAAATC---------------TTC------AAA---GGCGAAGCCTCCCAGCTTAATGAGAAC------AGC---GGAAACGTTGCATCT---CAG---AAT---GCT---TTC---AAA---ACTATC---CGTCTGATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TTVSA-RV------------FWK-LLVASLVMLLGGYLGE---T------G--V-----------LG-V-------------------SE------MFG-FVVGMAGWLYIIYEI-----F--K-GEASQLNEN--S-GNVAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927757 [I-Planctomycetes-b] PRGD_OTU016_64a113260b1d9b6dff7f3eeb54834a95 gb|KJ927757| PRGD_OTU016_64a113260b1d9b6dff7f3eeb54834a95, putative proteorhodopsin gene, partial cds. PRGD_OTU016_64a113260b1d9b6dff7f3eeb54834a95, putative proteorhodopsin gene, partial cds. KJ927757 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Mediterranean Sea (33.762, 29.175), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTAATTACTGTCCCTCTTCAAATCGTAGAATTCTACTTAATCCTAGCTGCTGTTACTGCTGTGAGTGCACGCGTTTTCTGGAAACTTTTAGTAGCATCACTAGTAATGCTACTAGGTGGTTACTTGGGTGAGACTGGAGTACTTGGCGTTTCAGAAATGTTTGGATTTATAGTTGGTATGGCCGGATGGCTTTACATCATCTATGAAATCTTTAAGGGCGAAGCCTCCCAGCTTAATGAGAACAGCGGAAACGTTGCATCTCAGAATGCTTTCAAAACTATCCGCCTGATTGTAACTGTA LITVPLQIVEFYLILAAVTAVSARVFWKLLVASLVMLLGGYLGETGVLGVSEMFGFIVGMAGWLYIIYEIFKGEASQLNENSGNVASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTCCCTCTTCAAATCGTAGAATTCTACTTAATCCTAGCTGCT---------GTT---ACTGCTGTGAGTGCA---CGCGTT------------------------------------TTCTGGAAA---CTTTTAGTAGCATCACTAGTAATGCTACTAGGTGGTTACTTGGGTGAG---------ACT------------------GGA------GTA---------------------------------CTTGGC---GTT---------------------------------------------------------TCAGAA------------------ATGTTTGGA---TTTATAGTTGGTATGGCCGGATGGCTTTACATCATCTATGAAATC---------------TTT------AAG---GGCGAAGCCTCCCAGCTTAATGAGAAC------AGC---GGAAACGTTGCATCT---CAG---AAT---GCT---TTC---AAA---ACTATC---CGCCTGATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVSA-RV------------FWK-LLVASLVMLLGGYLGE---T------G--V-----------LG-V-------------------SE------MFG-FIVGMAGWLYIIYEI-----F--K-GEASQLNEN--S-GNVAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927775 [I-Planctomycetes-b] PRGD_OTU016_c726ef8720e69aa5275486ebb635e893 gb|KJ927775| PRGD_OTU016_c726ef8720e69aa5275486ebb635e893, putative proteorhodopsin gene, partial cds. PRGD_OTU016_c726ef8720e69aa5275486ebb635e893, putative proteorhodopsin gene, partial cds. KJ927775 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACTGTCCCTCTTCAAATCGTAGAGTTCTACTTGATCCTTGCAGCTGTTACTGCAGTGAGTGCACGCGTTTTCTGGAAACTTCTAGTGGCATCACTAGTAATGCTACTAGGTGGTTACTTAGGTGAGACTGGAGTACTTGGCGTTTCAGAAATGTTAGGGTTTGTAGTTGGTATGGCTGGATGGCTTTATATCATCTATGAAATCTTCAAAGGCGAAGCCTCCCAGCTTAATGAGAACAGCGGAAACGTTGCATCTCAGAATGCTTTCAAAACTATCCGCCTGATTGTAACTGTA LITVPLQIVEFYLILAAVTAVSARVFWKLLVASLVMLLGGYLGETGVLGVSEMLGFVVGMAGWLYIIYEIFKGEASQLNENSGNVASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTCCCTCTTCAAATCGTAGAGTTCTACTTGATCCTTGCAGCT---------GTT---ACTGCAGTGAGTGCA---CGCGTT------------------------------------TTCTGGAAA---CTTCTAGTGGCATCACTAGTAATGCTACTAGGTGGTTACTTAGGTGAG---------ACT------------------GGA------GTA---------------------------------CTTGGC---GTT---------------------------------------------------------TCAGAA------------------ATGTTAGGG---TTTGTAGTTGGTATGGCTGGATGGCTTTATATCATCTATGAAATC---------------TTC------AAA---GGCGAAGCCTCCCAGCTTAATGAGAAC------AGC---GGAAACGTTGCATCT---CAG---AAT---GCT---TTC---AAA---ACTATC---CGCCTGATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVSA-RV------------FWK-LLVASLVMLLGGYLGE---T------G--V-----------LG-V-------------------SE------MLG-FVVGMAGWLYIIYEI-----F--K-GEASQLNEN--S-GNVAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ929728 [I-Planctomycetes-b] PRGD_OTU216_otuREP_0dacc966d19658a730ec096269f54c20 gb|KJ929728| PRGD_OTU216_otuREP_0dacc966d19658a730ec096269f54c20, putative proteorhodopsin gene, partial cds. PRGD_OTU216_otuREP_0dacc966d19658a730ec096269f54c20, putative proteorhodopsin gene, partial cds. KJ929728 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTAATTACTGTCCCCCTTCAAATTGTAGAGTTTTACTTAATTCTTGCTGCAGTTACTGTAGTGAGTGCGAAAGTTTTCTGGAAACTTTTAGGTGCATCACTAGTAATGCTACTAGGTGGTTACTTAGGCGAGACTGGACTACTTGATCCAACATTCGGATTCATCATAGGTATGGCTGGATGGCTTTACATCATCTATGAAATATTCAAAGGTGAAGCCTCCCAGCTCAATGAGAACAGCGGAAACGTTGCATCTCAGACTGCTTTTAAGACGATCCGTCTAATTGTGTCTGTA LITVPLQIVEFYLILAAVTVVSAKVFWKLLGASLVMLLGGYLGETGLLDPTFGFIIGMAGWLYIIYEIFKGEASQLNENSGNVASQTAFKTIRLIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTCCCCCTTCAAATTGTAGAGTTTTACTTAATTCTTGCTGCA---------GTT---ACTGTAGTGAGTGCG---AAAGTT------------------------------------TTCTGGAAA---CTTTTAGGTGCATCACTAGTAATGCTACTAGGTGGTTACTTAGGCGAG---------ACT------------------GGA------CTA---------------------------------CTT------------------------------------------------------------------GATCCA------------------ACATTCGGA---TTCATCATAGGTATGGCTGGATGGCTTTACATCATCTATGAAATA---------------TTC------AAA---GGTGAAGCCTCCCAGCTCAATGAGAAC------AGC---GGAAACGTTGCATCT---CAG---ACT---GCT---TTT---AAG---ACGATC---CGTCTAATTGTGTCTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVSA-KV------------FWK-LLGASLVMLLGGYLGE---T------G--L-----------L----------------------DP------TFG-FIIGMAGWLYIIYEI-----F--K-GEASQLNEN--S-GNVAS-Q-T-A-F-K-TI-RLIVSV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ929729 [I-Planctomycetes-b] PRGD_OTU216_f1c4e497230a7249a1daf1d50960e633 gb|KJ929729| PRGD_OTU216_f1c4e497230a7249a1daf1d50960e633, putative proteorhodopsin gene, partial cds. PRGD_OTU216_f1c4e497230a7249a1daf1d50960e633, putative proteorhodopsin gene, partial cds. KJ929729 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATTACTGTCCCCCTTCAAATTGTAGAGTTTTACTTAATTCTTGCTGCAGTCACTGTAGTGAGTGCGAAAGTTTTCTGGAAACTTTTAGGTGCATCACTAGTAATGCTACTAGGTGGTTACTTAGGCGAGACTGGACTACTTGATCCAAGATTCGGATTCATCATAGGTATGGTTGGATGGGTTTACATCATCTATGAAATCTTCAAAGGTGAAGCCTCCCAGCTCAATGAGAACAGCGGAAACGTTGCATCTCAGACTGCTTTCAAGACGATCCGTCTGATTGTGTCTGTA LITVPLQIVEFYLILAAVTVVSAKVFWKLLGASLVMLLGGYLGETGLLDPRFGFIIGMVGWVYIIYEIFKGEASQLNENSGNVASQTAFKTIRLIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTCCCCCTTCAAATTGTAGAGTTTTACTTAATTCTTGCTGCA---------GTC---ACTGTAGTGAGTGCG---AAAGTT------------------------------------TTCTGGAAA---CTTTTAGGTGCATCACTAGTAATGCTACTAGGTGGTTACTTAGGCGAG---------ACT------------------GGA------CTA---------------------------------CTT------------------------------------------------------------------GATCCA------------------AGATTCGGA---TTCATCATAGGTATGGTTGGATGGGTTTACATCATCTATGAAATC---------------TTC------AAA---GGTGAAGCCTCCCAGCTCAATGAGAAC------AGC---GGAAACGTTGCATCT---CAG---ACT---GCT---TTC---AAG---ACGATC---CGTCTGATTGTGTCTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVSA-KV------------FWK-LLGASLVMLLGGYLGE---T------G--L-----------L----------------------DP------RFG-FIIGMVGWVYIIYEI-----F--K-GEASQLNEN--S-GNVAS-Q-T-A-F-K-TI-RLIVSV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927763 [I-Planctomycetes-b] PRGD_OTU016_9df4733eef2a2be14ebe82c444d09cb5 gb|KJ927763| PRGD_OTU016_9df4733eef2a2be14ebe82c444d09cb5, putative proteorhodopsin gene, partial cds. PRGD_OTU016_9df4733eef2a2be14ebe82c444d09cb5, putative proteorhodopsin gene, partial cds. KJ927763 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) CTAATTACTGTCCCCCTTCAAATCGTAGAGTTTTACTTAATTCTTGCTGCAGTCACTGCAGTTAGCGCAAAAGTTTTCTGGAAGCTTTTAGGAGCATCACTAGTAATGCTGTTAGGTGGTTACCTAGGCGAGACTGGAGTACTAGGTGTTTCAGAAATGGCTGGATTTGTAGTTGGTATGGCTGGATGGCTTTATATAATCTATGAAATCTTCAAAGGTGAAGCCTCCCAACTCAATGAAAACAGCGGAAATGTTGCATCTCAAAATGCTTTCAAAACTATCCGTCTGATTGTAACTGTA LITVPLQIVEFYLILAAVTAVSAKVFWKLLGASLVMLLGGYLGETGVLGVSEMAGFVVGMAGWLYIIYEIFKGEASQLNENSGNVASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTCCCCCTTCAAATCGTAGAGTTTTACTTAATTCTTGCTGCA---------GTC---ACTGCAGTTAGCGCA---AAAGTT------------------------------------TTCTGGAAG---CTTTTAGGAGCATCACTAGTAATGCTGTTAGGTGGTTACCTAGGCGAG---------ACT------------------GGA------GTA---------------------------------CTAGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGCTGGA---TTTGTAGTTGGTATGGCTGGATGGCTTTATATAATCTATGAAATC---------------TTC------AAA---GGTGAAGCCTCCCAACTCAATGAAAAC------AGC---GGAAATGTTGCATCT---CAA---AAT---GCT---TTC---AAA---ACTATC---CGTCTGATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVSA-KV------------FWK-LLGASLVMLLGGYLGE---T------G--V-----------LG-V-------------------SE------MAG-FVVGMAGWLYIIYEI-----F--K-GEASQLNEN--S-GNVAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927739 [I-Planctomycetes-b] PRGD_OTU016_27fe430451de52ee413c8b94ed4e3056 gb|KJ927739| PRGD_OTU016_27fe430451de52ee413c8b94ed4e3056, putative proteorhodopsin gene, partial cds. PRGD_OTU016_27fe430451de52ee413c8b94ed4e3056, putative proteorhodopsin gene, partial cds. KJ927739 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-14.48, 113.45) CTAATTACTGTCCCTCTACAAATCGTAGAGTTCTACTTAATCCTTGCTGCTGTTACTACAGTAAGTGCACGCGTATTCTGGAAGCTTCTAATAGCATCTATTGTTATGCTGCTGGGCGGATACTTAGGCGAGACTGGAGTACTAGGTGTTTCAGAAATAGCAGGATTTGTAGTTGGTATGGCTGGATGGCTTTATATCATCTATGAAATCTTCAAAGGTGAAGCCTCCCAGCTTAATGAGAACAGCGGAAACGTTGCATCTCAAAATGCTTTCAAAACTATACGTCTGATTGTGACTGTA LITVPLQIVEFYLILAAVTTVSARVFWKLLIASIVMLLGGYLGETGVLGVSEIAGFVVGMAGWLYIIYEIFKGEASQLNENSGNVASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTCCCTCTACAAATCGTAGAGTTCTACTTAATCCTTGCTGCT---------GTT---ACTACAGTAAGTGCA---CGCGTA------------------------------------TTCTGGAAG---CTTCTAATAGCATCTATTGTTATGCTGCTGGGCGGATACTTAGGCGAG---------ACT------------------GGA------GTA---------------------------------CTAGGT---GTT---------------------------------------------------------TCAGAA------------------ATAGCAGGA---TTTGTAGTTGGTATGGCTGGATGGCTTTATATCATCTATGAAATC---------------TTC------AAA---GGTGAAGCCTCCCAGCTTAATGAGAAC------AGC---GGAAACGTTGCATCT---CAA---AAT---GCT---TTC---AAA---ACTATA---CGTCTGATTGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TTVSA-RV------------FWK-LLIASIVMLLGGYLGE---T------G--V-----------LG-V-------------------SE------IAG-FVVGMAGWLYIIYEI-----F--K-GEASQLNEN--S-GNVAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927772 [I-Planctomycetes-b] PRGD_OTU016_b3553efdf4370d524d5e026194138d7d gb|KJ927772| PRGD_OTU016_b3553efdf4370d524d5e026194138d7d, putative proteorhodopsin gene, partial cds. PRGD_OTU016_b3553efdf4370d524d5e026194138d7d, putative proteorhodopsin gene, partial cds. KJ927772 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) CTAATTACTGTCCCTCTTCAAATCGTAGAGTTCTACTTGATCCTTGTTGCTGTTACTACAGTAAGTGCACGCGTATTCTGGAAGCTTCTAATAGCATCTATTGTTATGCTGCTAGGCGGATACTTAGGCGAGACTGGAGTACTCGGTGTTTCAGAAATGGCTGGATTTGTAGTTGGTATGGCTGGATGGCTTTATATCATCTATGAGATCTTCAAAGGTGAAGCCTCCCAGCTTAATGAGAACAGCGGAAACGTTGCATCTCAAAATGCTTTCAAAACTATCCGTCTTATTGTAACTGTA LITVPLQIVEFYLILVAVTTVSARVFWKLLIASIVMLLGGYLGETGVLGVSEMAGFVVGMAGWLYIIYEIFKGEASQLNENSGNVASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTCCCTCTTCAAATCGTAGAGTTCTACTTGATCCTTGTTGCT---------GTT---ACTACAGTAAGTGCA---CGCGTA------------------------------------TTCTGGAAG---CTTCTAATAGCATCTATTGTTATGCTGCTAGGCGGATACTTAGGCGAG---------ACT------------------GGA------GTA---------------------------------CTCGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGCTGGA---TTTGTAGTTGGTATGGCTGGATGGCTTTATATCATCTATGAGATC---------------TTC------AAA---GGTGAAGCCTCCCAGCTTAATGAGAAC------AGC---GGAAACGTTGCATCT---CAA---AAT---GCT---TTC---AAA---ACTATC---CGTCTTATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILVA---V-TTVSA-RV------------FWK-LLIASIVMLLGGYLGE---T------G--V-----------LG-V-------------------SE------MAG-FVVGMAGWLYIIYEI-----F--K-GEASQLNEN--S-GNVAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927771 [I-Planctomycetes-b] PRGD_OTU016_aded343ab065abf914419ec4361abb0b gb|KJ927771| PRGD_OTU016_aded343ab065abf914419ec4361abb0b, putative proteorhodopsin gene, partial cds. PRGD_OTU016_aded343ab065abf914419ec4361abb0b, putative proteorhodopsin gene, partial cds. KJ927771 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (33.762, 29.175), Indian Ocean (-14.48, 113.45) TTAATTACTGTCCCTCTTCAAATCGTAGAGTTCTACTTGATCCTTGCTGCTGTTACTACTGTTAGTGCGCGCGTTTTCTGGAAGCTTCTAGTAGCATCTATTGTTATGCTGCTGGGCGGATACTTAGGCGAGACTGGAGTACTAGGTGTTTCAGCTATGGCTGGATTTGTAGTTGGTATGGCTGGATGGCTTTATATCATCTATGAAATTTTCAAAGGTGAAGCTTCCCAGCTTAATGAGAACAGCGGAAACGTTGCATCTCAAAATGCTTTCAAAACTATCCGTCTGATTGTAACTGTA LITVPLQIVEFYLILAAVTTVSARVFWKLLVASIVMLLGGYLGETGVLGVSAMAGFVVGMAGWLYIIYEIFKGEASQLNENSGNVASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTCCCTCTTCAAATCGTAGAGTTCTACTTGATCCTTGCTGCT---------GTT---ACTACTGTTAGTGCG---CGCGTT------------------------------------TTCTGGAAG---CTTCTAGTAGCATCTATTGTTATGCTGCTGGGCGGATACTTAGGCGAG---------ACT------------------GGA------GTA---------------------------------CTAGGT---GTT---------------------------------------------------------TCAGCT------------------ATGGCTGGA---TTTGTAGTTGGTATGGCTGGATGGCTTTATATCATCTATGAAATT---------------TTC------AAA---GGTGAAGCTTCCCAGCTTAATGAGAAC------AGC---GGAAACGTTGCATCT---CAA---AAT---GCT---TTC---AAA---ACTATC---CGTCTGATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TTVSA-RV------------FWK-LLVASIVMLLGGYLGE---T------G--V-----------LG-V-------------------SA------MAG-FVVGMAGWLYIIYEI-----F--K-GEASQLNEN--S-GNVAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927769 [I-Planctomycetes-b] PRGD_OTU016_acd40a4d9d8eaae7a96fce7f598ad993 gb|KJ927769| PRGD_OTU016_acd40a4d9d8eaae7a96fce7f598ad993, putative proteorhodopsin gene, partial cds. PRGD_OTU016_acd40a4d9d8eaae7a96fce7f598ad993, putative proteorhodopsin gene, partial cds. KJ927769 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATTACTGTTCCTCTTCAAATCGTAGAGTTCTATTTGATCCTTGCTGCTGTTACATCTGTAGGTGCACGCGTATTTTGGAAGCTTTTAATTGCATCTATTGTTATGCTGTTGGGCGGATACTTAGGCGAGACTGGAGTACTAGGTGTTTCAGAGATGGCTGGATTTGTAGTTGGTATGGCTGGATGGCTCTACATCATCTATGAAATCTTCAAAGGTGAAGCCTCCCAGCTTAATGAGAACAGTGGAAACGTTGCATCTCAAAATGCTTTCAAAACTATTCGTCTGATTGTAACTGTA LITVPLQIVEFYLILAAVTSVGARVFWKLLIASIVMLLGGYLGETGVLGVSEMAGFVVGMAGWLYIIYEIFKGEASQLNENSGNVASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTTCCTCTTCAAATCGTAGAGTTCTATTTGATCCTTGCTGCT---------GTT---ACATCTGTAGGTGCA---CGCGTA------------------------------------TTTTGGAAG---CTTTTAATTGCATCTATTGTTATGCTGTTGGGCGGATACTTAGGCGAG---------ACT------------------GGA------GTA---------------------------------CTAGGT---GTT---------------------------------------------------------TCAGAG------------------ATGGCTGGA---TTTGTAGTTGGTATGGCTGGATGGCTCTACATCATCTATGAAATC---------------TTC------AAA---GGTGAAGCCTCCCAGCTTAATGAGAAC------AGT---GGAAACGTTGCATCT---CAA---AAT---GCT---TTC---AAA---ACTATT---CGTCTGATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TSVGA-RV------------FWK-LLIASIVMLLGGYLGE---T------G--V-----------LG-V-------------------SE------MAG-FVVGMAGWLYIIYEI-----F--K-GEASQLNEN--S-GNVAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927779 [I-Planctomycetes-b] PRGD_OTU016_e4cf7ad51945f6ffd67c7463b880470e gb|KJ927779| PRGD_OTU016_e4cf7ad51945f6ffd67c7463b880470e, putative proteorhodopsin gene, partial cds. PRGD_OTU016_e4cf7ad51945f6ffd67c7463b880470e, putative proteorhodopsin gene, partial cds. KJ927779 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTAATTACTGTCCCTCTCCAAATCGTAGAATTCTATTTGATCCTTGCTGCTGTTACTGCTGTAAGTGCACGCGTATTCTGGAAGCTTCTAATAGCATCTATTGTAATGCTGTTGGGCGGATACTTAGGAGAAACTGGAGTACTAGGTGTTTCAGAAACAGCTGGATTTGTAGTTGGTATGGCTGGATGGCTTTATATCATCTATGAAATCTTCAAAGGCGAAGCCTCCCAGCTTAATGAGAACAGCGGAAATGTTGCATCGCAGAATGCTTTCAAAACTATCCGTCTGATTGTAACTATA LITVPLQIVEFYLILAAVTAVSARVFWKLLIASIVMLLGGYLGETGVLGVSETAGFVVGMAGWLYIIYEIFKGEASQLNENSGNVASQNAFKTIRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTCCCTCTCCAAATCGTAGAATTCTATTTGATCCTTGCTGCT---------GTT---ACTGCTGTAAGTGCA---CGCGTA------------------------------------TTCTGGAAG---CTTCTAATAGCATCTATTGTAATGCTGTTGGGCGGATACTTAGGAGAA---------ACT------------------GGA------GTA---------------------------------CTAGGT---GTT---------------------------------------------------------TCAGAA------------------ACAGCTGGA---TTTGTAGTTGGTATGGCTGGATGGCTTTATATCATCTATGAAATC---------------TTC------AAA---GGCGAAGCCTCCCAGCTTAATGAGAAC------AGC---GGAAATGTTGCATCG---CAG---AAT---GCT---TTC---AAA---ACTATC---CGTCTGATTGTAACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVSA-RV------------FWK-LLIASIVMLLGGYLGE---T------G--V-----------LG-V-------------------SE------TAG-FVVGMAGWLYIIYEI-----F--K-GEASQLNEN--S-GNVAS-Q-N-A-F-K-TI-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927748 [I-Planctomycetes-b] PRGD_OTU016_45e89f44e033e4404337458c37d5cbaf gb|KJ927748| PRGD_OTU016_45e89f44e033e4404337458c37d5cbaf, putative proteorhodopsin gene, partial cds. PRGD_OTU016_45e89f44e033e4404337458c37d5cbaf, putative proteorhodopsin gene, partial cds. KJ927748 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Mediterranean Sea (33.762, 29.175) CTAATTACTGTCCCACTCCAAATCGTAGAATTCTACCTGATTCTTGCTGCAGTTACCGCAGTCAGTGCGCGAGTATTCTGGAAACTTCTAATTGCATCTATTGTTATGCTTTTGGGTGGATACTTAGGGGAAACTCAAGTACTAGGTGTTTCAGAAATGGCTGGATTTGTAGTTGGTATGGCTGGATGGCTTTACATTATCTATGAAATCTTCAAAGGTGAAGCTTCCCAACTTAATGAAAACAGCGGGAATGTTGCCTCTCAAAATGCTTTTAAAACTATCCGTTTGATTGTAACTGTG LITVPLQIVEFYLILAAVTAVSARVFWKLLIASIVMLLGGYLGETQVLGVSEMAGFVVGMAGWLYIIYEIFKGEASQLNENSGNVASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTCCCACTCCAAATCGTAGAATTCTACCTGATTCTTGCTGCA---------GTT---ACCGCAGTCAGTGCG---CGAGTA------------------------------------TTCTGGAAA---CTTCTAATTGCATCTATTGTTATGCTTTTGGGTGGATACTTAGGGGAA---------ACT------------------CAA------GTA---------------------------------CTAGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGCTGGA---TTTGTAGTTGGTATGGCTGGATGGCTTTACATTATCTATGAAATC---------------TTC------AAA---GGTGAAGCTTCCCAACTTAATGAAAAC------AGC---GGGAATGTTGCCTCT---CAA---AAT---GCT---TTT---AAA---ACTATC---CGTTTGATTGTAACTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVSA-RV------------FWK-LLIASIVMLLGGYLGE---T------Q--V-----------LG-V-------------------SE------MAG-FVVGMAGWLYIIYEI-----F--K-GEASQLNEN--S-GNVAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ927734 [I-Planctomycetes-b] PRGD_OTU016_021e49b8ceb35f83b421109d61b7ad90 gb|KJ927734| PRGD_OTU016_021e49b8ceb35f83b421109d61b7ad90, putative proteorhodopsin gene, partial cds. PRGD_OTU016_021e49b8ceb35f83b421109d61b7ad90, putative proteorhodopsin gene, partial cds. KJ927734 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATTACTGTACCTCTCCAAATCATAGAGTTTTACTTGATCCTTGCTGCTGTAACTACAGTAAGCGCGCGCGTTTTCTGGAAGCTTTTAATAGCATCACTCGTTATGCTTGTGGGTGGATACTTAGGGGAAACTCAAGTACTAGGTGTTTCAGAAATGGCTGGATTTATAGTTGGTATGGCTGGATGGCTTTACATCATCTATGAAATCTTCAAAGGTGAAGCCTCCCAGCTTAATGAAAACAGTGGAAACGCTGCATCTCAAAATGCTTTCAAGACGATTCGTCTTATTGTGACTGTA LITVPLQIIEFYLILAAVTTVSARVFWKLLIASLVMLVGGYLGETQVLGVSEMAGFIVGMAGWLYIIYEIFKGEASQLNENSGNAASQNAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTACCTCTCCAAATCATAGAGTTTTACTTGATCCTTGCTGCT---------GTA---ACTACAGTAAGCGCG---CGCGTT------------------------------------TTCTGGAAG---CTTTTAATAGCATCACTCGTTATGCTTGTGGGTGGATACTTAGGGGAA---------ACT------------------CAA------GTA---------------------------------CTAGGT---GTT---------------------------------------------------------TCAGAA------------------ATGGCTGGA---TTTATAGTTGGTATGGCTGGATGGCTTTACATCATCTATGAAATC---------------TTC------AAA---GGTGAAGCCTCCCAGCTTAATGAAAAC------AGT---GGAAACGCTGCATCT---CAA---AAT---GCT---TTC---AAG---ACGATT---CGTCTTATTGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLILAA---V-TTVSA-RV------------FWK-LLIASLVMLVGGYLGE---T------Q--V-----------LG-V-------------------SE------MAG-FIVGMAGWLYIIYEI-----F--K-GEASQLNEN--S-GNAAS-Q-N-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ928506 [I-Planctomycetes-b] PRGD_OTU039_42698739689ecfd316b802ece82db3a9 gb|KJ928506| PRGD_OTU039_42698739689ecfd316b802ece82db3a9, putative proteorhodopsin gene, partial cds. PRGD_OTU039_42698739689ecfd316b802ece82db3a9, putative proteorhodopsin gene, partial cds. KJ928506 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (33.762, 29.175), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTAATAACTGTGCCACTGCAAATAGTGGAGTTTTACTTGATTCTCGCTGCCGTGACAGTAGTCGGCGTACGGGTCTTCTGGAAGCTTTTGATCGCATCACTGGTGATGCTGATTGGTGGTTACCTAGGTGAGGCTGGTTATGTAAATACGACACTTGGTTTTGTTGTGGGCATGGCAGGCTGGCTCTACATCATTTACGAAATCTTTAAAGGTGAAGCCTCACAGCTTAATGAAAATAGCGGTAACGTAGCTTCTCAGAAAGCCTTTAAGACTATTCGTCTCATTGTAACCGTT LITVPLQIVEFYLILAAVTVVGVRVFWKLLIASLVMLIGGYLGEAGYVNTTLGFVVGMAGWLYIIYEIFKGEASQLNENSGNVASQKAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACTGTGCCACTGCAAATAGTGGAGTTTTACTTGATTCTCGCTGCC---------GTG---ACAGTAGTCGGCGTA---CGGGTC------------------------------------TTCTGGAAG---CTTTTGATCGCATCACTGGTGATGCTGATTGGTGGTTACCTAGGTGAG---------GCT------------------GGT------TAT---------------------------------GTA------------------------------------------------------------------AATACG------------------ACACTTGGT---TTTGTTGTGGGCATGGCAGGCTGGCTCTACATCATTTACGAAATC---------------TTT------AAA---GGTGAAGCCTCACAGCTTAATGAAAAT------AGC---GGTAACGTAGCTTCT---CAG---AAA---GCC---TTT---AAG---ACTATT---CGTCTCATTGTAACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVGV-RV------------FWK-LLIASLVMLIGGYLGE---A------G--Y-----------V----------------------NT------TLG-FVVGMAGWLYIIYEI-----F--K-GEASQLNEN--S-GNVAS-Q-K-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ928518 [I-Planctomycetes-b] PRGD_OTU039_e602c46db38a47499da26a577f8c7af6 gb|KJ928518| PRGD_OTU039_e602c46db38a47499da26a577f8c7af6, putative proteorhodopsin gene, partial cds. PRGD_OTU039_e602c46db38a47499da26a577f8c7af6, putative proteorhodopsin gene, partial cds. KJ928518 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTAATAACTGTGCCACTGCAAATAGTGGAGTTTTACTTGATTCTCGCTGCCGTGACAGTAGTCGGCGTGCGGGTCTTCTGGAAGCTTTTGATCGCATCACTGGTGATGCTGATTGGTGGTTACCTAGGTGAGGCTGGTTATGTAAATACAACACTTGGTTTTGTTGTGGGCATGGCAGGCTGGCTCTACATCATCTACGAAATCTTTAAAGGTGAAGCCTCACAGCTTAATGAAAATAGCGGTAACGTGGCTTCTCAGAAAGCCTTTAAGACTATTCGTCTCATTGTAACCGTT LITVPLQIVEFYLILAAVTVVGVRVFWKLLIASLVMLIGGYLGEAGYVNTTLGFVVGMAGWLYIIYEIFKGEASQLNENSGNVASQKAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACTGTGCCACTGCAAATAGTGGAGTTTTACTTGATTCTCGCTGCC---------GTG---ACAGTAGTCGGCGTG---CGGGTC------------------------------------TTCTGGAAG---CTTTTGATCGCATCACTGGTGATGCTGATTGGTGGTTACCTAGGTGAG---------GCT------------------GGT------TAT---------------------------------GTA------------------------------------------------------------------AATACA------------------ACACTTGGT---TTTGTTGTGGGCATGGCAGGCTGGCTCTACATCATCTACGAAATC---------------TTT------AAA---GGTGAAGCCTCACAGCTTAATGAAAAT------AGC---GGTAACGTGGCTTCT---CAG---AAA---GCC---TTT---AAG---ACTATT---CGTCTCATTGTAACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVGV-RV------------FWK-LLIASLVMLIGGYLGE---A------G--Y-----------V----------------------NT------TLG-FVVGMAGWLYIIYEI-----F--K-GEASQLNEN--S-GNVAS-Q-K-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ928515 [I-Planctomycetes-b] PRGD_OTU039_b789374c72e4d134546ac82566fab12d gb|KJ928515| PRGD_OTU039_b789374c72e4d134546ac82566fab12d, putative proteorhodopsin gene, partial cds. PRGD_OTU039_b789374c72e4d134546ac82566fab12d, putative proteorhodopsin gene, partial cds. KJ928515 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAATAACTGTGCCACTGCAAATAGTGGAGTTTTACTTGATTCTCGCTGCCGTAACAGTAGTCGGTGTGCGGGTTTTCTGGAAGCTTTTGATCGCATCCCTGGTGATGCTGATTGGTGGTTACCTAGGTGAGGCTGGTTATGTAAATACAACACTCGGTTTTGTTGTAGGCATGGCAGGCTGGCTCTACATCATCTACGAAATCTTCAAAGGTGAAGCCTCACAGCTTAATGAAAACAGCGGTAACGTGGCTTCTCAGAAAGCGTTTAAGACTATTCGTCTCATTGTAACCGTT LITVPLQIVEFYLILAAVTVVGVRVFWKLLIASLVMLIGGYLGEAGYVNTTLGFVVGMAGWLYIIYEIFKGEASQLNENSGNVASQKAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACTGTGCCACTGCAAATAGTGGAGTTTTACTTGATTCTCGCTGCC---------GTA---ACAGTAGTCGGTGTG---CGGGTT------------------------------------TTCTGGAAG---CTTTTGATCGCATCCCTGGTGATGCTGATTGGTGGTTACCTAGGTGAG---------GCT------------------GGT------TAT---------------------------------GTA------------------------------------------------------------------AATACA------------------ACACTCGGT---TTTGTTGTAGGCATGGCAGGCTGGCTCTACATCATCTACGAAATC---------------TTC------AAA---GGTGAAGCCTCACAGCTTAATGAAAAC------AGC---GGTAACGTGGCTTCT---CAG---AAA---GCG---TTT---AAG---ACTATT---CGTCTCATTGTAACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVGV-RV------------FWK-LLIASLVMLIGGYLGE---A------G--Y-----------V----------------------NT------TLG-FVVGMAGWLYIIYEI-----F--K-GEASQLNEN--S-GNVAS-Q-K-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ928507 [I-Planctomycetes-b] PRGD_OTU039_49c7ac62334f0b2c04de9adebca263ef gb|KJ928507| PRGD_OTU039_49c7ac62334f0b2c04de9adebca263ef, putative proteorhodopsin gene, partial cds. PRGD_OTU039_49c7ac62334f0b2c04de9adebca263ef, putative proteorhodopsin gene, partial cds. KJ928507 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATAACTGTACCACTGCAAATAGTAGAGTTTTACTTGATTCTCGCTGCCGTGACAGTAGTCGGCGTGCGGGTCTTCTGGAAGCTATTGATCGCATCACTGGTGATGCTGATTGGTGGTTACCTAGGTGAGGCTGGTTATGTAAATACAACACTTGGTTTTGTTGTGGGCATGGCAGGCTGGCTCTACATCATCTATGAAATCTTCAAGGGTGAAGCCTCACAGCTTAATGAAAATAGCGGTAACGTGGCTTCTCAGAAAGCCTTTAAGACTATTCGTCTCATTGTAACCGTT LITVPLQIVEFYLILAAVTVVGVRVFWKLLIASLVMLIGGYLGEAGYVNTTLGFVVGMAGWLYIIYEIFKGEASQLNENSGNVASQKAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACTGTACCACTGCAAATAGTAGAGTTTTACTTGATTCTCGCTGCC---------GTG---ACAGTAGTCGGCGTG---CGGGTC------------------------------------TTCTGGAAG---CTATTGATCGCATCACTGGTGATGCTGATTGGTGGTTACCTAGGTGAG---------GCT------------------GGT------TAT---------------------------------GTA------------------------------------------------------------------AATACA------------------ACACTTGGT---TTTGTTGTGGGCATGGCAGGCTGGCTCTACATCATCTATGAAATC---------------TTC------AAG---GGTGAAGCCTCACAGCTTAATGAAAAT------AGC---GGTAACGTGGCTTCT---CAG---AAA---GCC---TTT---AAG---ACTATT---CGTCTCATTGTAACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVGV-RV------------FWK-LLIASLVMLIGGYLGE---A------G--Y-----------V----------------------NT------TLG-FVVGMAGWLYIIYEI-----F--K-GEASQLNEN--S-GNVAS-Q-K-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ928514 [I-Planctomycetes-b] PRGD_OTU039_b629b0b4c3502401f2f0247e95c29074 gb|KJ928514| PRGD_OTU039_b629b0b4c3502401f2f0247e95c29074, putative proteorhodopsin gene, partial cds. PRGD_OTU039_b629b0b4c3502401f2f0247e95c29074, putative proteorhodopsin gene, partial cds. KJ928514 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATAACTGTGCCACTGCAAATAGTGGAGTTTTACTTGATTCTCGCTGCCGTGACAGTAGTCGGCGTGCGGGTCTTTTGGAAGCTTTTGATCGCATCACTGGTGATGCTGATTGGTGGTTACCTAGGTGAGGCTGGTTATGTAAATACAACACTTGGTTTTGTTGTGGGAATGGCAGGCTGGCTCTACATCATCTATGAGATCTTCAAGGGTGAAGCCTCACAGGTTAATGAAAATAGCGGTAACGTGGCTTCTCAGAAAGCCTTTAAGACTATTCGTCTCATCGTAACCGTT LITVPLQIVEFYLILAAVTVVGVRVFWKLLIASLVMLIGGYLGEAGYVNTTLGFVVGMAGWLYIIYEIFKGEASQVNENSGNVASQKAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACTGTGCCACTGCAAATAGTGGAGTTTTACTTGATTCTCGCTGCC---------GTG---ACAGTAGTCGGCGTG---CGGGTC------------------------------------TTTTGGAAG---CTTTTGATCGCATCACTGGTGATGCTGATTGGTGGTTACCTAGGTGAG---------GCT------------------GGT------TAT---------------------------------GTA------------------------------------------------------------------AATACA------------------ACACTTGGT---TTTGTTGTGGGAATGGCAGGCTGGCTCTACATCATCTATGAGATC---------------TTC------AAG---GGTGAAGCCTCACAGGTTAATGAAAAT------AGC---GGTAACGTGGCTTCT---CAG---AAA---GCC---TTT---AAG---ACTATT---CGTCTCATCGTAACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVGV-RV------------FWK-LLIASLVMLIGGYLGE---A------G--Y-----------V----------------------NT------TLG-FVVGMAGWLYIIYEI-----F--K-GEASQVNEN--S-GNVAS-Q-K-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ928501 [I-Planctomycetes-b] PRGD_OTU039_1d243ecaef86feb535c0b1b3afe47cc7 gb|KJ928501| PRGD_OTU039_1d243ecaef86feb535c0b1b3afe47cc7, putative proteorhodopsin gene, partial cds. PRGD_OTU039_1d243ecaef86feb535c0b1b3afe47cc7, putative proteorhodopsin gene, partial cds. KJ928501 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATAACTGTGCCACTGCAAATAGTGGAGTTTTACTTGATTCTCGCTGCTGTGACAGTAGTCGGCGTGCGGGTCTTCTGGAAGCTCTTGATCGCATCGCTGGTTATGCTGATTGGTGGTTACCTGGGTGAAGCTGGTTACGTAAACGCAACACTTGGTTTTGTTGTGGGTATGGCAGGCTGGCTATACATCATCTATGAAATCTTCAAAGGTGAAGCCTCACAGGTTAATGAAGGTAGCGGTAACGTGGCTTCTCAGAAAGCCTTTAAGACCATTCGTCTCATTGTTACCGTT LITVPLQIVEFYLILAAVTVVGVRVFWKLLIASLVMLIGGYLGEAGYVNATLGFVVGMAGWLYIIYEIFKGEASQVNEGSGNVASQKAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACTGTGCCACTGCAAATAGTGGAGTTTTACTTGATTCTCGCTGCT---------GTG---ACAGTAGTCGGCGTG---CGGGTC------------------------------------TTCTGGAAG---CTCTTGATCGCATCGCTGGTTATGCTGATTGGTGGTTACCTGGGTGAA---------GCT------------------GGT------TAC---------------------------------GTA------------------------------------------------------------------AACGCA------------------ACACTTGGT---TTTGTTGTGGGTATGGCAGGCTGGCTATACATCATCTATGAAATC---------------TTC------AAA---GGTGAAGCCTCACAGGTTAATGAAGGT------AGC---GGTAACGTGGCTTCT---CAG---AAA---GCC---TTT---AAG---ACCATT---CGTCTCATTGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVGV-RV------------FWK-LLIASLVMLIGGYLGE---A------G--Y-----------V----------------------NA------TLG-FVVGMAGWLYIIYEI-----F--K-GEASQVNEG--S-GNVAS-Q-K-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ928521 [I-Planctomycetes-b] PRGD_OTU039_fa3608a38bdf811e4e91b1f1661fd9d4 gb|KJ928521| PRGD_OTU039_fa3608a38bdf811e4e91b1f1661fd9d4, putative proteorhodopsin gene, partial cds. PRGD_OTU039_fa3608a38bdf811e4e91b1f1661fd9d4, putative proteorhodopsin gene, partial cds. KJ928521 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-14.48, 113.45; -33.28, 45.35) TTAATAACTGTGCCACTGCAAATAGTGGAGTTTTACTTGATTCTCGCTGCTGTGACAGTAGTCGGCGTGCGGGTCTTCTGGAAGCTCTTGATCGCATCGCTGGTGATGCTGATTGGTGGTTACCTAGGTGAAGCTGGTTACGTAAACGCAACACTTGGTTTTGTTGTGGGTATGGCAGGCTGGCTATACATCATCTATGAAATCTTCAAAGGTGAAGCCTCACAGGTTAATGAAGGTAGCGGTAACGTGGCTTCTCAGAAAGCCTTTAAGACCATTCGTCTCATTGTTACCGTT LITVPLQIVEFYLILAAVTVVGVRVFWKLLIASLVMLIGGYLGEAGYVNATLGFVVGMAGWLYIIYEIFKGEASQVNEGSGNVASQKAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACTGTGCCACTGCAAATAGTGGAGTTTTACTTGATTCTCGCTGCT---------GTG---ACAGTAGTCGGCGTG---CGGGTC------------------------------------TTCTGGAAG---CTCTTGATCGCATCGCTGGTGATGCTGATTGGTGGTTACCTAGGTGAA---------GCT------------------GGT------TAC---------------------------------GTA------------------------------------------------------------------AACGCA------------------ACACTTGGT---TTTGTTGTGGGTATGGCAGGCTGGCTATACATCATCTATGAAATC---------------TTC------AAA---GGTGAAGCCTCACAGGTTAATGAAGGT------AGC---GGTAACGTGGCTTCT---CAG---AAA---GCC---TTT---AAG---ACCATT---CGTCTCATTGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVGV-RV------------FWK-LLIASLVMLIGGYLGE---A------G--Y-----------V----------------------NA------TLG-FVVGMAGWLYIIYEI-----F--K-GEASQVNEG--S-GNVAS-Q-K-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ928523 [I-Planctomycetes-b] PRGD_OTU039_ffe6515fcf91beacdb1c6b55bdb6682c gb|KJ928523| PRGD_OTU039_ffe6515fcf91beacdb1c6b55bdb6682c, putative proteorhodopsin gene, partial cds. PRGD_OTU039_ffe6515fcf91beacdb1c6b55bdb6682c, putative proteorhodopsin gene, partial cds. KJ928523 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATAACTGTGCCACTGCAAATAGTGGAGTTTTACTTGATTCTCGCTGCTGTTACAGTAGTCGGCGTGCGGGTCTTCTGGAAGCTCTTGATCGCATCGCTGGTGATGCTTATTGGTGGTTACCTAGGTGAAGCTGGTTACGTAAACGCAACACTTGGTTTTGTTGTGGGTATGGCAGGCTGGCTATACATCATCTATGAAATCTTCAAAGGTGAAGCCTCACAGGTTAATGAAAGTAGCGGTAACGTGGCTTCTCAGAAAGCCTTTAAGACCATTCGTCTCATTGTTACCGTT LITVPLQIVEFYLILAAVTVVGVRVFWKLLIASLVMLIGGYLGEAGYVNATLGFVVGMAGWLYIIYEIFKGEASQVNESSGNVASQKAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACTGTGCCACTGCAAATAGTGGAGTTTTACTTGATTCTCGCTGCT---------GTT---ACAGTAGTCGGCGTG---CGGGTC------------------------------------TTCTGGAAG---CTCTTGATCGCATCGCTGGTGATGCTTATTGGTGGTTACCTAGGTGAA---------GCT------------------GGT------TAC---------------------------------GTA------------------------------------------------------------------AACGCA------------------ACACTTGGT---TTTGTTGTGGGTATGGCAGGCTGGCTATACATCATCTATGAAATC---------------TTC------AAA---GGTGAAGCCTCACAGGTTAATGAAAGT------AGC---GGTAACGTGGCTTCT---CAG---AAA---GCC---TTT---AAG---ACCATT---CGTCTCATTGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVGV-RV------------FWK-LLIASLVMLIGGYLGE---A------G--Y-----------V----------------------NA------TLG-FVVGMAGWLYIIYEI-----F--K-GEASQVNES--S-GNVAS-Q-K-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ928512 [I-Planctomycetes-b] PRGD_OTU039_b130618fba2fa2a5f6cb082854cb5e05 gb|KJ928512| PRGD_OTU039_b130618fba2fa2a5f6cb082854cb5e05, putative proteorhodopsin gene, partial cds. PRGD_OTU039_b130618fba2fa2a5f6cb082854cb5e05, putative proteorhodopsin gene, partial cds. KJ928512 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -33.28, 45.35) CTGATAACTGTACCACTGCAAATAGTAGAGTTTTACTTAATTCTTGCTGCTGTGACAGTGGTCGGCGTGCGGGTCTTCTGGAAGCTTTTGATTGCATCACTGGTGATGCTGATCGGTGGTTACCTAGGTGAGGCTGGTTACGTAAACACAACACTTGGTTTTGTTGTGGGCATGGCAGGCTGGCTCTACATCATCTATGAAATCTTCAAAGGTGAAGCCTCACAGCTTAATGAAAATAGCGGTAACGTGGCTTCTCAGAAAGCCTTCAAGACTATTCGTCTCATTGTTACCGTA LITVPLQIVEFYLILAAVTVVGVRVFWKLLIASLVMLIGGYLGEAGYVNTTLGFVVGMAGWLYIIYEIFKGEASQLNENSGNVASQKAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACTGTACCACTGCAAATAGTAGAGTTTTACTTAATTCTTGCTGCT---------GTG---ACAGTGGTCGGCGTG---CGGGTC------------------------------------TTCTGGAAG---CTTTTGATTGCATCACTGGTGATGCTGATCGGTGGTTACCTAGGTGAG---------GCT------------------GGT------TAC---------------------------------GTA------------------------------------------------------------------AACACA------------------ACACTTGGT---TTTGTTGTGGGCATGGCAGGCTGGCTCTACATCATCTATGAAATC---------------TTC------AAA---GGTGAAGCCTCACAGCTTAATGAAAAT------AGC---GGTAACGTGGCTTCT---CAG---AAA---GCC---TTC---AAG---ACTATT---CGTCTCATTGTTACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVGV-RV------------FWK-LLIASLVMLIGGYLGE---A------G--Y-----------V----------------------NT------TLG-FVVGMAGWLYIIYEI-----F--K-GEASQLNEN--S-GNVAS-Q-K-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ928517 [I-Planctomycetes-b] PRGD_OTU039_c88a3f2f78c5bcaa623f3c2ab697d983 gb|KJ928517| PRGD_OTU039_c88a3f2f78c5bcaa623f3c2ab697d983, putative proteorhodopsin gene, partial cds. PRGD_OTU039_c88a3f2f78c5bcaa623f3c2ab697d983, putative proteorhodopsin gene, partial cds. KJ928517 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATAACTGTACCACTGCAAATAGTAGAGTTTTACTTAATTCTTGCTGCTGTGACAGTTGTCGGCGTGCGGGTCTTCTGGAAGCTTTTGATTGCATCACTGGTTATGCTGATCGGTGGTTACCTAGGTGAGGCTGGTTACGTAAACACAACACTTGGTTTTGTCGTGGGCATGGCAGGCTGGCTCTACATCATCTATGAAATCTTCAAAGGTGAAGCCTCACAGGTTAATGAAAATAGCGGTAACGTGGCCTCTCAGAAAGCCTTCAAGACTATTCGTCTAATTGTTACAGTA LITVPLQIVEFYLILAAVTVVGVRVFWKLLIASLVMLIGGYLGEAGYVNTTLGFVVGMAGWLYIIYEIFKGEASQVNENSGNVASQKAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACTGTACCACTGCAAATAGTAGAGTTTTACTTAATTCTTGCTGCT---------GTG---ACAGTTGTCGGCGTG---CGGGTC------------------------------------TTCTGGAAG---CTTTTGATTGCATCACTGGTTATGCTGATCGGTGGTTACCTAGGTGAG---------GCT------------------GGT------TAC---------------------------------GTA------------------------------------------------------------------AACACA------------------ACACTTGGT---TTTGTCGTGGGCATGGCAGGCTGGCTCTACATCATCTATGAAATC---------------TTC------AAA---GGTGAAGCCTCACAGGTTAATGAAAAT------AGC---GGTAACGTGGCCTCT---CAG---AAA---GCC---TTC---AAG---ACTATT---CGTCTAATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVGV-RV------------FWK-LLIASLVMLIGGYLGE---A------G--Y-----------V----------------------NT------TLG-FVVGMAGWLYIIYEI-----F--K-GEASQVNEN--S-GNVAS-Q-K-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ928505 [I-Planctomycetes-b] PRGD_OTU039_2e65ccb9beddaa23c40bd775c50fe950 gb|KJ928505| PRGD_OTU039_2e65ccb9beddaa23c40bd775c50fe950, putative proteorhodopsin gene, partial cds. PRGD_OTU039_2e65ccb9beddaa23c40bd775c50fe950, putative proteorhodopsin gene, partial cds. KJ928505 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATAACTGTACCACTGCAAATAGTAGAGTTTTACTTAATTCTTGCTGCTGTGACAGTGGTCGGCGTGCGGGTCTTTTGGAAACTCTTGATTGCATCACTGGTGATGCTGATCGGTGGTTACCTAGGTGAGGCTGGTTACGTAAACACAACACTTGGTTTTGTTGTGGGCATGGCAGGCTGGCTCTACATCATCTATGAAATCTTCAAAGGTGAAGCCTCACAGCTTAATGAAAATAGCGGTAACGTGGCTTCTCAGAAAGCCTTCAAGACTATTCGTCTCATTGTTACCGTT LITVPLQIVEFYLILAAVTVVGVRVFWKLLIASLVMLIGGYLGEAGYVNTTLGFVVGMAGWLYIIYEIFKGEASQLNENSGNVASQKAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACTGTACCACTGCAAATAGTAGAGTTTTACTTAATTCTTGCTGCT---------GTG---ACAGTGGTCGGCGTG---CGGGTC------------------------------------TTTTGGAAA---CTCTTGATTGCATCACTGGTGATGCTGATCGGTGGTTACCTAGGTGAG---------GCT------------------GGT------TAC---------------------------------GTA------------------------------------------------------------------AACACA------------------ACACTTGGT---TTTGTTGTGGGCATGGCAGGCTGGCTCTACATCATCTATGAAATC---------------TTC------AAA---GGTGAAGCCTCACAGCTTAATGAAAAT------AGC---GGTAACGTGGCTTCT---CAG---AAA---GCC---TTC---AAG---ACTATT---CGTCTCATTGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVGV-RV------------FWK-LLIASLVMLIGGYLGE---A------G--Y-----------V----------------------NT------TLG-FVVGMAGWLYIIYEI-----F--K-GEASQLNEN--S-GNVAS-Q-K-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ928510 [I-Planctomycetes-b] PRGD_OTU039_7fa54881ab20861a5753231e0c048767 gb|KJ928510| PRGD_OTU039_7fa54881ab20861a5753231e0c048767, putative proteorhodopsin gene, partial cds. PRGD_OTU039_7fa54881ab20861a5753231e0c048767, putative proteorhodopsin gene, partial cds. KJ928510 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTAATAACTGTGCCACTGCAAATTGTGGAATTTTACTTAATTCTTGCTGCTGTGACAGTGGTCGGCGTGCGGGTCTTCTGGAAGCTTTTGATTGCATCACTGGTGATGCTGATCGGTGGTTACCTAGGTGAGGCTGGTTATGTAAACACAACGCTTGGTTTTGTTGTGGGCATGGCTGGCTGGCTCTACATCATCTATGAAATCTTCAAAGGTGAAGCCTCACAGCTTAATGAAAATAGCGGTAACGTGGCTTCTCAGAAAGCCTTCAAGACTATTCGTCTCATTGTTACCGTA LITVPLQIVEFYLILAAVTVVGVRVFWKLLIASLVMLIGGYLGEAGYVNTTLGFVVGMAGWLYIIYEIFKGEASQLNENSGNVASQKAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATAACTGTGCCACTGCAAATTGTGGAATTTTACTTAATTCTTGCTGCT---------GTG---ACAGTGGTCGGCGTG---CGGGTC------------------------------------TTCTGGAAG---CTTTTGATTGCATCACTGGTGATGCTGATCGGTGGTTACCTAGGTGAG---------GCT------------------GGT------TAT---------------------------------GTA------------------------------------------------------------------AACACA------------------ACGCTTGGT---TTTGTTGTGGGCATGGCTGGCTGGCTCTACATCATCTATGAAATC---------------TTC------AAA---GGTGAAGCCTCACAGCTTAATGAAAAT------AGC---GGTAACGTGGCTTCT---CAG---AAA---GCC---TTC---AAG---ACTATT---CGTCTCATTGTTACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVGV-RV------------FWK-LLIASLVMLIGGYLGE---A------G--Y-----------V----------------------NT------TLG-FVVGMAGWLYIIYEI-----F--K-GEASQLNEN--S-GNVAS-Q-K-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ928503 [I-Planctomycetes-b] PRGD_OTU039_23ad32e21f8047954a3f1f56080c28ec gb|KJ928503| PRGD_OTU039_23ad32e21f8047954a3f1f56080c28ec, putative proteorhodopsin gene, partial cds. PRGD_OTU039_23ad32e21f8047954a3f1f56080c28ec, putative proteorhodopsin gene, partial cds. KJ928503 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATAACTGTGCCACTGCAAATAGTAGAGTTTTACTTAATTCTTGCTGCTGTGACAGTAGTCGGCGTACGGGTCTTCTGGAAGCTTTTGATTGCATCACTGGTGATGCTAATCGGTGGTTACCTAGGTGAGGCTGGTTACGTAAACACAACACTTGGTTTTGTTGTGGGCATGGCAGGCTGGCTCTACATCATCTATGAAATCTTCAAAGGTGAAGCCTCACAGCTTAATGAAAATAGCGGTAACGTAGCTTCTCAGAAAGCCTTCAAGACTATTCGTCTAATTGTTACCGTT LITVPLQIVEFYLILAAVTVVGVRVFWKLLIASLVMLIGGYLGEAGYVNTTLGFVVGMAGWLYIIYEIFKGEASQLNENSGNVASQKAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATAACTGTGCCACTGCAAATAGTAGAGTTTTACTTAATTCTTGCTGCT---------GTG---ACAGTAGTCGGCGTA---CGGGTC------------------------------------TTCTGGAAG---CTTTTGATTGCATCACTGGTGATGCTAATCGGTGGTTACCTAGGTGAG---------GCT------------------GGT------TAC---------------------------------GTA------------------------------------------------------------------AACACA------------------ACACTTGGT---TTTGTTGTGGGCATGGCAGGCTGGCTCTACATCATCTATGAAATC---------------TTC------AAA---GGTGAAGCCTCACAGCTTAATGAAAAT------AGC---GGTAACGTAGCTTCT---CAG---AAA---GCC---TTC---AAG---ACTATT---CGTCTAATTGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVGV-RV------------FWK-LLIASLVMLIGGYLGE---A------G--Y-----------V----------------------NT------TLG-FVVGMAGWLYIIYEI-----F--K-GEASQLNEN--S-GNVAS-Q-K-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ928509 [I-Planctomycetes-b] PRGD_OTU039_5e6e5b3a83bce3ba0881f4358b78b29e gb|KJ928509| PRGD_OTU039_5e6e5b3a83bce3ba0881f4358b78b29e, putative proteorhodopsin gene, partial cds. PRGD_OTU039_5e6e5b3a83bce3ba0881f4358b78b29e, putative proteorhodopsin gene, partial cds. KJ928509 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATAACTGTGCCACTGCAAATAGTAGAGTTCTATTTGATTCTTGCGGCTGTGACGGTAGTCGGCGTCCGGGTTTTCTGGAAGCTTTTGATTGCATCACTGGTGATGCTAATCGGTGGTTACCTAGGTGAGGCTGGTTACGTAAACACAACACTTGGTTTTGTTGTGGGCATGGCAGGATGGCTTTACATCATCTATGAAATCTTCAAAGGTGAAGCCTCACAGCTTAACGAAAATAGCGGTAACGTTGCTTCTCAGACAGCCTTCAAGACTATTCGTCTAATTGTTACCGTT LITVPLQIVEFYLILAAVTVVGVRVFWKLLIASLVMLIGGYLGEAGYVNTTLGFVVGMAGWLYIIYEIFKGEASQLNENSGNVASQTAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACTGTGCCACTGCAAATAGTAGAGTTCTATTTGATTCTTGCGGCT---------GTG---ACGGTAGTCGGCGTC---CGGGTT------------------------------------TTCTGGAAG---CTTTTGATTGCATCACTGGTGATGCTAATCGGTGGTTACCTAGGTGAG---------GCT------------------GGT------TAC---------------------------------GTA------------------------------------------------------------------AACACA------------------ACACTTGGT---TTTGTTGTGGGCATGGCAGGATGGCTTTACATCATCTATGAAATC---------------TTC------AAA---GGTGAAGCCTCACAGCTTAACGAAAAT------AGC---GGTAACGTTGCTTCT---CAG---ACA---GCC---TTC---AAG---ACTATT---CGTCTAATTGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVGV-RV------------FWK-LLIASLVMLIGGYLGE---A------G--Y-----------V----------------------NT------TLG-FVVGMAGWLYIIYEI-----F--K-GEASQLNEN--S-GNVAS-Q-T-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ928520 [I-Planctomycetes-b] PRGD_OTU039_f2a4b3ece8bd6bc2e75bf288aff93ee9 gb|KJ928520| PRGD_OTU039_f2a4b3ece8bd6bc2e75bf288aff93ee9, putative proteorhodopsin gene, partial cds. PRGD_OTU039_f2a4b3ece8bd6bc2e75bf288aff93ee9, putative proteorhodopsin gene, partial cds. KJ928520 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185) TTGATAACTGTGCCACTGCAAATAGTAGAGTTTTACTTAATTCTTGCTGCAGTGACAGTGGTCAGCGTGCGAGTCTTCTGGAAGCTCTTAGTCGCATCTCTGGTAATGCTGATTGGTGGTTACTTGGGTGAGGCTGGTTATGTAGATACAACACTTGGATTTGCTGTGGGCATGGCAGGCTGGCTCTACATCATCTATGAAATCTTTAAAGGTGAAGCCTCTAAGCTCAATGCGAACAGCGGCAATGTGGCTTCTCAGAAAGCCTTTAAGACTATTCGTCTTATTGTTACCGTT LITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLIGGYLGEAGYVDTTLGFAVGMAGWLYIIYEIFKGEASKLNANSGNVASQKAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACTGTGCCACTGCAAATAGTAGAGTTTTACTTAATTCTTGCTGCA---------GTG---ACAGTGGTCAGCGTG---CGAGTC------------------------------------TTCTGGAAG---CTCTTAGTCGCATCTCTGGTAATGCTGATTGGTGGTTACTTGGGTGAG---------GCT------------------GGT------TAT---------------------------------GTA------------------------------------------------------------------GATACA------------------ACACTTGGA---TTTGCTGTGGGCATGGCAGGCTGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCTAAGCTCAATGCGAAC------AGC---GGCAATGTGGCTTCT---CAG---AAA---GCC---TTT---AAG---ACTATT---CGTCTTATTGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLIGGYLGE---A------G--Y-----------V----------------------DT------TLG-FAVGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNVAS-Q-K-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ928508 [I-Planctomycetes-b] PRGD_OTU039_4dbeb083f65e509f0d3aba3bfc719304 gb|KJ928508| PRGD_OTU039_4dbeb083f65e509f0d3aba3bfc719304, putative proteorhodopsin gene, partial cds. PRGD_OTU039_4dbeb083f65e509f0d3aba3bfc719304, putative proteorhodopsin gene, partial cds. KJ928508 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), English Channel (48.7717, -3.9683) TTGATAACTGTGCCACTGCAAATAGTAGAGTTTTACTTAATTCTTGCTGCAGTGACAGTGGTCAGCGTGCGAGTCTTCTGGAAGCTCTTAGTCGCATCTCTGGTAATGCTGATTGGTGGTTACTTGGGTGAGGCTGGTTATGTAGATACAACACTTGGATTTGCTGTGGGCATGGCAGGCTGGCTCTACATCATCTATGAAATCTTTAAAGGTGAAGCCTCTAAGCTCAATGCGAACAGCGGTAATGTGGCTTCTCAGAAAGCTTTTAAGACTATTCGTCTTATTGTTACCGTT LITVPLQIVEFYLILAAVTVVSVRVFWKLLVASLVMLIGGYLGEAGYVDTTLGFAVGMAGWLYIIYEIFKGEASKLNANSGNVASQKAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACTGTGCCACTGCAAATAGTAGAGTTTTACTTAATTCTTGCTGCA---------GTG---ACAGTGGTCAGCGTG---CGAGTC------------------------------------TTCTGGAAG---CTCTTAGTCGCATCTCTGGTAATGCTGATTGGTGGTTACTTGGGTGAG---------GCT------------------GGT------TAT---------------------------------GTA------------------------------------------------------------------GATACA------------------ACACTTGGA---TTTGCTGTGGGCATGGCAGGCTGGCTCTACATCATCTATGAAATC---------------TTT------AAA---GGTGAAGCCTCTAAGCTCAATGCGAAC------AGC---GGTAATGTGGCTTCT---CAG---AAA---GCT---TTT---AAG---ACTATT---CGTCTTATTGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVSV-RV------------FWK-LLVASLVMLIGGYLGE---A------G--Y-----------V----------------------DT------TLG-FAVGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNVAS-Q-K-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ928500 [I-Planctomycetes-b] PRGD_OTU039_07d8acdcc652be573e2b5b30569b6414 gb|KJ928500| PRGD_OTU039_07d8acdcc652be573e2b5b30569b6414, putative proteorhodopsin gene, partial cds. PRGD_OTU039_07d8acdcc652be573e2b5b30569b6414, putative proteorhodopsin gene, partial cds. KJ928500 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.935 18.508 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (67.49, -168.12), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Indian Ocean (-33.28, 45.35) CTGATCACTGTGCCGCTGCAAATAGTAGAGTTCTACTTAATTCTTGCTGCGGTGACTGCGGTCAGCGTGCGCGTTTTCTGGAAGCTTTTAATTGCATCACTGGTTATGTTGATTGGTGGTTATTTGGGTGAGGCTGGCTACGTAGACGTAACACTTGGATTTATTGTGGGCATGGCAGGCTGGCTCTACATCATCTACGAGATCTTCAAAGGTGAGGCCTCTAAGCTGAATGCAAATAGCGGTAATCTAGCTTCTCAGACAGCCTTTAAGACGATTCGTCTGATTGTTACCGTT LITVPLQIVEFYLILAAVTAVSVRVFWKLLIASLVMLIGGYLGEAGYVDVTLGFIVGMAGWLYIIYEIFKGEASKLNANSGNLASQTAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTGCCGCTGCAAATAGTAGAGTTCTACTTAATTCTTGCTGCG---------GTG---ACTGCGGTCAGCGTG---CGCGTT------------------------------------TTCTGGAAG---CTTTTAATTGCATCACTGGTTATGTTGATTGGTGGTTATTTGGGTGAG---------GCT------------------GGC------TAC---------------------------------GTA------------------------------------------------------------------GACGTA------------------ACACTTGGA---TTTATTGTGGGCATGGCAGGCTGGCTCTACATCATCTACGAGATC---------------TTC------AAA---GGTGAGGCCTCTAAGCTGAATGCAAAT------AGC---GGTAATCTAGCTTCT---CAG---ACA---GCC---TTT---AAG---ACGATT---CGTCTGATTGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVSV-RV------------FWK-LLIASLVMLIGGYLGE---A------G--Y-----------V----------------------DV------TLG-FIVGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-T-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ928511 [I-Planctomycetes-b] PRGD_OTU039_a7349d5e7e8ccbd7f49b4059c58a3be1 gb|KJ928511| PRGD_OTU039_a7349d5e7e8ccbd7f49b4059c58a3be1, putative proteorhodopsin gene, partial cds. PRGD_OTU039_a7349d5e7e8ccbd7f49b4059c58a3be1, putative proteorhodopsin gene, partial cds. KJ928511 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.935 18.508 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097; 33.935, 18.508) CTGATCACTGTGCCGCTGCAAATAGTAGAGTTCTACTTGATTCTTGCTGCGGTGACTGCGGTCAGCGTGCGCGTATTCTGGAAGCTTTTAATTGCATCACTAGTTATGTTGATTGGTGGTTATTTGGGTGAGGCTGGCTACGTAGACGTAACACTTGGATTTATTGTGGGCATGGCAGGCTGGCTCTACATCATCTATGAGATCTTCAAAGGTGAGGCCTCTAAGCTGAATGCAAATAGCGGTAATCTGGCTTCTCAGACAGCCTTTAAGACGATTCGTCTGATTGTTACCGTT LITVPLQIVEFYLILAAVTAVSVRVFWKLLIASLVMLIGGYLGEAGYVDVTLGFIVGMAGWLYIIYEIFKGEASKLNANSGNLASQTAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTGCCGCTGCAAATAGTAGAGTTCTACTTGATTCTTGCTGCG---------GTG---ACTGCGGTCAGCGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAATTGCATCACTAGTTATGTTGATTGGTGGTTATTTGGGTGAG---------GCT------------------GGC------TAC---------------------------------GTA------------------------------------------------------------------GACGTA------------------ACACTTGGA---TTTATTGTGGGCATGGCAGGCTGGCTCTACATCATCTATGAGATC---------------TTC------AAA---GGTGAGGCCTCTAAGCTGAATGCAAAT------AGC---GGTAATCTGGCTTCT---CAG---ACA---GCC---TTT---AAG---ACGATT---CGTCTGATTGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVSV-RV------------FWK-LLIASLVMLIGGYLGE---A------G--Y-----------V----------------------DV------TLG-FIVGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-T-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ928522 [I-Planctomycetes-b] PRGD_OTU039_ff48c6003cb6f85a9cb18685b39da27f gb|KJ928522| PRGD_OTU039_ff48c6003cb6f85a9cb18685b39da27f, putative proteorhodopsin gene, partial cds. PRGD_OTU039_ff48c6003cb6f85a9cb18685b39da27f, putative proteorhodopsin gene, partial cds. KJ928522 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.935, 18.508) CTGATCACTGTGCCGCTGCAAATAGTAGAGTTCTACTTAATTCTTGCTGCGGTGACTGCGGTCAGCGTGCGCGTATTCTGGAAGCTTTTAATTGCATCACTGGTTATGCTGATTGGTGGTTACCTGGGTGAGGCTGGCTACGTAGACGTAACACTTGGATTTATTGTGGGCATGGCAGGCTGGCTCTACATCATCTATGAGATCTTCAAAGGTGAGGCCTCTAAGCTGAATGCAAATAGCGGTAATCTAGCTTCTCAGACAGCCTTTAAGACGATTCGTCTGATTGTTACCGTT LITVPLQIVEFYLILAAVTAVSVRVFWKLLIASLVMLIGGYLGEAGYVDVTLGFIVGMAGWLYIIYEIFKGEASKLNANSGNLASQTAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTGCCGCTGCAAATAGTAGAGTTCTACTTAATTCTTGCTGCG---------GTG---ACTGCGGTCAGCGTG---CGCGTA------------------------------------TTCTGGAAG---CTTTTAATTGCATCACTGGTTATGCTGATTGGTGGTTACCTGGGTGAG---------GCT------------------GGC------TAC---------------------------------GTA------------------------------------------------------------------GACGTA------------------ACACTTGGA---TTTATTGTGGGCATGGCAGGCTGGCTCTACATCATCTATGAGATC---------------TTC------AAA---GGTGAGGCCTCTAAGCTGAATGCAAAT------AGC---GGTAATCTAGCTTCT---CAG---ACA---GCC---TTT---AAG---ACGATT---CGTCTGATTGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVSV-RV------------FWK-LLIASLVMLIGGYLGE---A------G--Y-----------V----------------------DV------TLG-FIVGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-T-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ928499 [I-Planctomycetes-b] PRGD_OTU039_otuREP_3f2d2ced9bebf9bbf4db0492992770a8 gb|KJ928499| PRGD_OTU039_otuREP_3f2d2ced9bebf9bbf4db0492992770a8, putative proteorhodopsin gene, partial cds. PRGD_OTU039_otuREP_3f2d2ced9bebf9bbf4db0492992770a8, putative proteorhodopsin gene, partial cds. KJ928499 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.935 18.508 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTGATCACTGTTCCGCTGCAAATAGTAGAGTTCTACTTGATTCTTGCTGCGGTGACTGCGGTCAGCGTGCGCGTTTTCTGGAAGCTTTTAATTGCATCACTAGTCATGCTGATTGGTGGTTACCTGGGTGAGGCTGGCTACGTAGACGTAACACTTGGATTTATTGTGGGCATGGCAGGCTGGCTCTACATCATCTACGAGATCTTCAAAGGTGAGGCCTCTAAGCTGAATGCAAATAGCGGTAATCTGGCTTCTCAGACAGCCTTTAAGACGATTCGTCTGATTGTTACCGTT LITVPLQIVEFYLILAAVTAVSVRVFWKLLIASLVMLIGGYLGEAGYVDVTLGFIVGMAGWLYIIYEIFKGEASKLNANSGNLASQTAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTTCCGCTGCAAATAGTAGAGTTCTACTTGATTCTTGCTGCG---------GTG---ACTGCGGTCAGCGTG---CGCGTT------------------------------------TTCTGGAAG---CTTTTAATTGCATCACTAGTCATGCTGATTGGTGGTTACCTGGGTGAG---------GCT------------------GGC------TAC---------------------------------GTA------------------------------------------------------------------GACGTA------------------ACACTTGGA---TTTATTGTGGGCATGGCAGGCTGGCTCTACATCATCTACGAGATC---------------TTC------AAA---GGTGAGGCCTCTAAGCTGAATGCAAAT------AGC---GGTAATCTGGCTTCT---CAG---ACA---GCC---TTT---AAG---ACGATT---CGTCTGATTGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVSV-RV------------FWK-LLIASLVMLIGGYLGE---A------G--Y-----------V----------------------DV------TLG-FIVGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-T-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ928502 [I-Planctomycetes-b] PRGD_OTU039_1dd1b40d56f5e9d5afabc7710fabe151 gb|KJ928502| PRGD_OTU039_1dd1b40d56f5e9d5afabc7710fabe151, putative proteorhodopsin gene, partial cds. PRGD_OTU039_1dd1b40d56f5e9d5afabc7710fabe151, putative proteorhodopsin gene, partial cds. KJ928502 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175) CTGATCACTGTTCCGCTGCAAATAGTAGAGTTCTACTTGATTCTTGCTGCGGTGACTGCGGTCAGCGTGCGCGTTTTCTGGAAGCTTTTAATTGCATCACTAGTTATGCTGATTGGTGGTTACCTTGGTGAGGCTGGCTACGTAGACGTAACACTTGGATTTTTTGTGGGCATGGCAGGCTGGCTCTACATCATCTACGAGATCTTCAAAGGTGAGGCCTCTAAGCTGAATGCAAATAGCGGTAATCTGGCTTCTCAGACAGCCTTTAAGACAATTCGTCTGATTGTTACCGTT LITVPLQIVEFYLILAAVTAVSVRVFWKLLIASLVMLIGGYLGEAGYVDVTLGFFVGMAGWLYIIYEIFKGEASKLNANSGNLASQTAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTTCCGCTGCAAATAGTAGAGTTCTACTTGATTCTTGCTGCG---------GTG---ACTGCGGTCAGCGTG---CGCGTT------------------------------------TTCTGGAAG---CTTTTAATTGCATCACTAGTTATGCTGATTGGTGGTTACCTTGGTGAG---------GCT------------------GGC------TAC---------------------------------GTA------------------------------------------------------------------GACGTA------------------ACACTTGGA---TTTTTTGTGGGCATGGCAGGCTGGCTCTACATCATCTACGAGATC---------------TTC------AAA---GGTGAGGCCTCTAAGCTGAATGCAAAT------AGC---GGTAATCTGGCTTCT---CAG---ACA---GCC---TTT---AAG---ACAATT---CGTCTGATTGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVSV-RV------------FWK-LLIASLVMLIGGYLGE---A------G--Y-----------V----------------------DV------TLG-FFVGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-T-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ928513 [I-Planctomycetes-b] PRGD_OTU039_b50b8407bcdeffcb5a47e84fc3a35e38 gb|KJ928513| PRGD_OTU039_b50b8407bcdeffcb5a47e84fc3a35e38, putative proteorhodopsin gene, partial cds. PRGD_OTU039_b50b8407bcdeffcb5a47e84fc3a35e38, putative proteorhodopsin gene, partial cds. KJ928513 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.935 18.508 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Pacific side (72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTGATCACTGTTCCGCTGCAAATAGTAGAGTTCTACTTGATTCTTGCTGCGGTGACTGCGGTCAGCGTGCGCGTTTTCTGGAAGCTTTTAATTGCATCACTGGTTATGCTGATTGGTGGTTACCTGGGTGAGGCTGGCTACGTAGACGTAACACTTGGATTTATTGTGGGCATGGCAGGCTGGCTCTACATCATCTATGAGATCTTCAAAGGTGAGGCCTCTAAGCTGAATGCAAATAGCGGTAATCTGGCTTCTCAGACAGCCTTTAAGACGATTCGCCTGATTGTTACCGTT LITVPLQIVEFYLILAAVTAVSVRVFWKLLIASLVMLIGGYLGEAGYVDVTLGFIVGMAGWLYIIYEIFKGEASKLNANSGNLASQTAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTTCCGCTGCAAATAGTAGAGTTCTACTTGATTCTTGCTGCG---------GTG---ACTGCGGTCAGCGTG---CGCGTT------------------------------------TTCTGGAAG---CTTTTAATTGCATCACTGGTTATGCTGATTGGTGGTTACCTGGGTGAG---------GCT------------------GGC------TAC---------------------------------GTA------------------------------------------------------------------GACGTA------------------ACACTTGGA---TTTATTGTGGGCATGGCAGGCTGGCTCTACATCATCTATGAGATC---------------TTC------AAA---GGTGAGGCCTCTAAGCTGAATGCAAAT------AGC---GGTAATCTGGCTTCT---CAG---ACA---GCC---TTT---AAG---ACGATT---CGCCTGATTGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVSV-RV------------FWK-LLIASLVMLIGGYLGE---A------G--Y-----------V----------------------DV------TLG-FIVGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-T-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ928519 [I-Planctomycetes-b] PRGD_OTU039_ea5bccb39261f96d8194a8a98df514c1 gb|KJ928519| PRGD_OTU039_ea5bccb39261f96d8194a8a98df514c1, putative proteorhodopsin gene, partial cds. PRGD_OTU039_ea5bccb39261f96d8194a8a98df514c1, putative proteorhodopsin gene, partial cds. KJ928519 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.935 18.508 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Pacific side (69.5142, -133.4185), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Indian Ocean (-33.28, 45.35) CTGATCACTGTGCCGCTGCAAATAGTAGAGTTCTACTTAATTCTTGCTGCGGTGACTGCGGTCAGCGTGCGCGTTTTCTGGAAGCTTTTAATTGCATCACTGGTTATGCTGATTGGTGGTTACCTGGGTGAGGCTGGCTACGTAGACGTAACACTTGGATTTATTGTGGGCATGGCAGGCTGGCTCTATATCATCTATGAGATCTTCAAAGGTGAGGCCTCTAAGCTGAATGCAAATAGCGGTAATCTGGCTTCTCAGACAGCCTTTAAGACGATTCGTCTGATTGTTACCGTT LITVPLQIVEFYLILAAVTAVSVRVFWKLLIASLVMLIGGYLGEAGYVDVTLGFIVGMAGWLYIIYEIFKGEASKLNANSGNLASQTAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTGCCGCTGCAAATAGTAGAGTTCTACTTAATTCTTGCTGCG---------GTG---ACTGCGGTCAGCGTG---CGCGTT------------------------------------TTCTGGAAG---CTTTTAATTGCATCACTGGTTATGCTGATTGGTGGTTACCTGGGTGAG---------GCT------------------GGC------TAC---------------------------------GTA------------------------------------------------------------------GACGTA------------------ACACTTGGA---TTTATTGTGGGCATGGCAGGCTGGCTCTATATCATCTATGAGATC---------------TTC------AAA---GGTGAGGCCTCTAAGCTGAATGCAAAT------AGC---GGTAATCTGGCTTCT---CAG---ACA---GCC---TTT---AAG---ACGATT---CGTCTGATTGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVSV-RV------------FWK-LLIASLVMLIGGYLGE---A------G--Y-----------V----------------------DV------TLG-FIVGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNLAS-Q-T-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ928516 [I-Planctomycetes-b] PRGD_OTU039_ba322a8f3d84adccd00eb45ed5147cff gb|KJ928516| PRGD_OTU039_ba322a8f3d84adccd00eb45ed5147cff, putative proteorhodopsin gene, partial cds. PRGD_OTU039_ba322a8f3d84adccd00eb45ed5147cff, putative proteorhodopsin gene, partial cds. KJ928516 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.935 18.508 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508) CTGATCACTGTGCCGCTGCAAATAGTAGAGTTCTACTTGATTCTTGCTGCGGTGACTGCAGTCAGCGTGCGCGTTTTCTGGAAGCTTTTAATTGCATCACTGGTTATGCTGATTGGTGGTTACCTAGGTGAGGCTGGCTACGTAGACGTAACACTTGGATTTATTGTGGGCATGGCAGGCTGGCTCTACATCATCTACGAGATCTTCAAAGGTGAGGCCTCTAAGCTGAATGCAAATAGCGGTAATGTGGCTTCTCAGACAGCCTTTAAGACGATTCGTCTGATTGTTACCGTT LITVPLQIVEFYLILAAVTAVSVRVFWKLLIASLVMLIGGYLGEAGYVDVTLGFIVGMAGWLYIIYEIFKGEASKLNANSGNVASQTAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACTGTGCCGCTGCAAATAGTAGAGTTCTACTTGATTCTTGCTGCG---------GTG---ACTGCAGTCAGCGTG---CGCGTT------------------------------------TTCTGGAAG---CTTTTAATTGCATCACTGGTTATGCTGATTGGTGGTTACCTAGGTGAG---------GCT------------------GGC------TAC---------------------------------GTA------------------------------------------------------------------GACGTA------------------ACACTTGGA---TTTATTGTGGGCATGGCAGGCTGGCTCTACATCATCTACGAGATC---------------TTC------AAA---GGTGAGGCCTCTAAGCTGAATGCAAAT------AGC---GGTAATGTGGCTTCT---CAG---ACA---GCC---TTT---AAG---ACGATT---CGTCTGATTGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVSV-RV------------FWK-LLIASLVMLIGGYLGE---A------G--Y-----------V----------------------DV------TLG-FIVGMAGWLYIIYEI-----F--K-GEASKLNAN--S-GNVAS-Q-T-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ928504 [I-Planctomycetes-b] PRGD_OTU039_2b49ca6d9dbdaf0b783e5f38f993de83 gb|KJ928504| PRGD_OTU039_2b49ca6d9dbdaf0b783e5f38f993de83, putative proteorhodopsin gene, partial cds. PRGD_OTU039_2b49ca6d9dbdaf0b783e5f38f993de83, putative proteorhodopsin gene, partial cds. KJ928504 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175) TTGATAACAGTTCCTCTACAAATTGTAGAATTTTATTTAATATTAGCAGCTGTAACCATAGTAAGTGTACGCGTATTTTGGAAATTGTTAATTGCTTCACTAGTTATGCTAATAGGCGGTTACCTCGGTGAAGTTGGTTACGTAGATGCAACTATTGGTTTCATAGTAGGCATGGCAGGATGGCTCTACATAATTTTTGAAATCTTTAAGGGTGAGGCCTCTAAGGTTAATGCTAACAGCGGTAATTTAGCATCGCAGAATGCCTTTAAAACGATTCGACTTATCGTAACATTT LITVPLQIVEFYLILAAVTIVSVRVFWKLLIASLVMLIGGYLGEVGYVDATIGFIVGMAGWLYIIFEIFKGEASKVNANSGNLASQNAFKTIRLIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACAGTTCCTCTACAAATTGTAGAATTTTATTTAATATTAGCAGCT---------GTA---ACCATAGTAAGTGTA---CGCGTA------------------------------------TTTTGGAAA---TTGTTAATTGCTTCACTAGTTATGCTAATAGGCGGTTACCTCGGTGAA---------GTT------------------GGT------TAC---------------------------------GTA------------------------------------------------------------------GATGCA------------------ACTATTGGT---TTCATAGTAGGCATGGCAGGATGGCTCTACATAATTTTTGAAATC---------------TTT------AAG---GGTGAGGCCTCTAAGGTTAATGCTAAC------AGC---GGTAATTTAGCATCG---CAG---AAT---GCC---TTT---AAA---ACGATT---CGACTTATCGTAACATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TIVSV-RV------------FWK-LLIASLVMLIGGYLGE---V------G--Y-----------V----------------------DA------TIG-FIVGMAGWLYIIFEI-----F--K-GEASKVNAN--S-GNLAS-Q-N-A-F-K-TI-RLIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ929537 [I-Planctomycetes-b] PRGD_OTU147_cec163b1ff1c9a6cc4d9415d72cc1ce4 gb|KJ929537| PRGD_OTU147_cec163b1ff1c9a6cc4d9415d72cc1ce4, putative proteorhodopsin gene, partial cds. PRGD_OTU147_cec163b1ff1c9a6cc4d9415d72cc1ce4, putative proteorhodopsin gene, partial cds. KJ929537 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTCATAACGGTCCCGCTACAAATAGTAGAATTCTATCTTATCTTAGCTGCTGTTACTGTAGTTAGAGTAAATGTTTTTTGGAAGCTTCTTACTGCATCAATAGTTATGCTTGTTGGAGGATACATGGGCGAAGCAGGTTACATTAGTGCTAATATTGGCTTTATCGTTGGAATGGCTGGATGGTTATATATCATTTATGAGATTTTCAAAGGAGAAGCTTCAAAGGTCAATGCATCTAGCGGAAGTATTGCTTCACAAAAAGCATTTAAGACAATAAGAGCTATCGTTACTTTC LITVPLQIVEFYLILAAVTVVRVNVFWKLLTASIVMLVGGYMGEAGYISANIGFIVGMAGWLYIIYEIFKGEASKVNASSGSIASQKAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATAACGGTCCCGCTACAAATAGTAGAATTCTATCTTATCTTAGCTGCT---------GTT---ACTGTAGTTAGAGTA---AATGTT------------------------------------TTTTGGAAG---CTTCTTACTGCATCAATAGTTATGCTTGTTGGAGGATACATGGGCGAA---------GCA------------------GGT------TAC---------------------------------ATT------------------------------------------------------------------AGTGCT------------------AATATTGGC---TTTATCGTTGGAATGGCTGGATGGTTATATATCATTTATGAGATT---------------TTC------AAA---GGAGAAGCTTCAAAGGTCAATGCATCT------AGC---GGAAGTATTGCTTCA---CAA---AAA---GCA---TTT---AAG---ACAATA---AGAGCTATCGTTACTTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVRV-NV------------FWK-LLTASIVMLVGGYMGE---A------G--Y-----------I----------------------SA------NIG-FIVGMAGWLYIIYEI-----F--K-GEASKVNAS--S-GSIAS-Q-K-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ929536 [I-Planctomycetes-b] PRGD_OTU147_98ebdb703a60c16ff1d370a893acdcf7 gb|KJ929536| PRGD_OTU147_98ebdb703a60c16ff1d370a893acdcf7, putative proteorhodopsin gene, partial cds. PRGD_OTU147_98ebdb703a60c16ff1d370a893acdcf7, putative proteorhodopsin gene, partial cds. KJ929536 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTTATTACAGTTCCTCTACAAATTGTAGAATTCTATCTTATTTTAGCTGCTGTTACCGTGGTTAGAGTGAATGTGTTTTGGAAACTCCTTACAGCTTCAGTTGTTATGCTTGTTGGAGGATATATGGGCGAGGCAGGTTATCTTAGTGCTAACGTTGGTTTCATCGTAGGAATGGCTGGTTGGTTATTCATCATTTATGAGATCTTTAAAGGAGAAGCTTCCAAAGTAAATGCTTCTAGCGGTAGTATTGCGTCTCAAAAAGCATTCAAGACTATAAGAGCAATCGTTACATTT LITVPLQIVEFYLILAAVTVVRVNVFWKLLTASVVMLVGGYMGEAGYLSANVGFIVGMAGWLFIIYEIFKGEASKVNASSGSIASQKAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATTACAGTTCCTCTACAAATTGTAGAATTCTATCTTATTTTAGCTGCT---------GTT---ACCGTGGTTAGAGTG---AATGTG------------------------------------TTTTGGAAA---CTCCTTACAGCTTCAGTTGTTATGCTTGTTGGAGGATATATGGGCGAG---------GCA------------------GGT------TAT---------------------------------CTT------------------------------------------------------------------AGTGCT------------------AACGTTGGT---TTCATCGTAGGAATGGCTGGTTGGTTATTCATCATTTATGAGATC---------------TTT------AAA---GGAGAAGCTTCCAAAGTAAATGCTTCT------AGC---GGTAGTATTGCGTCT---CAA---AAA---GCA---TTC---AAG---ACTATA---AGAGCAATCGTTACATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVRV-NV------------FWK-LLTASVVMLVGGYMGE---A------G--Y-----------L----------------------SA------NVG-FIVGMAGWLFIIYEI-----F--K-GEASKVNAS--S-GSIAS-Q-K-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ929534 [I-Planctomycetes-b] PRGD_OTU147_otuREP_e7b691b96eb633c80f8b2871a364ee6f gb|KJ929534| PRGD_OTU147_otuREP_e7b691b96eb633c80f8b2871a364ee6f, putative proteorhodopsin gene, partial cds. PRGD_OTU147_otuREP_e7b691b96eb633c80f8b2871a364ee6f, putative proteorhodopsin gene, partial cds. KJ929534 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Indian Ocean (-23.5956, 69.0419) CTTATAACAGTTCCTCTACAAATAGTTGAATTCTATCTTATCTTAGCTGCTGTTACTGTAGTTAGAGTAAATGTTTTTTGGAAGCTTCTTACGGCATCAATAGTTATGCTGGTTGGTGGTTACATGGGTGAAGCTGGATACATTAGTGCAAGTCTGGGCTTTATTATAGGAATGGCTGGTTGGTTGTTCATAATATACGAGATCTTTATAGGTGAAGCCTCAAAGGTTAATGCTTCAAGTGGCAGTATTGCATCCCAAAAAGCGTTTAAAACAATTAGAGCAATTGTTACTTTT LITVPLQIVEFYLILAAVTVVRVNVFWKLLTASIVMLVGGYMGEAGYISASLGFIIGMAGWLFIIYEIFIGEASKVNASSGSIASQKAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATAACAGTTCCTCTACAAATAGTTGAATTCTATCTTATCTTAGCTGCT---------GTT---ACTGTAGTTAGAGTA---AATGTT------------------------------------TTTTGGAAG---CTTCTTACGGCATCAATAGTTATGCTGGTTGGTGGTTACATGGGTGAA---------GCT------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AGTGCA------------------AGTCTGGGC---TTTATTATAGGAATGGCTGGTTGGTTGTTCATAATATACGAGATC---------------TTT------ATA---GGTGAAGCCTCAAAGGTTAATGCTTCA------AGT---GGCAGTATTGCATCC---CAA---AAA---GCG---TTT---AAA---ACAATT---AGAGCAATTGTTACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVRV-NV------------FWK-LLTASIVMLVGGYMGE---A------G--Y-----------I----------------------SA------SLG-FIIGMAGWLFIIYEI-----F--I-GEASKVNAS--S-GSIAS-Q-K-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ929535 [I-Planctomycetes-b] PRGD_OTU147_7f3fa9e81666e4c2c69081fd5cf25597 gb|KJ929535| PRGD_OTU147_7f3fa9e81666e4c2c69081fd5cf25597, putative proteorhodopsin gene, partial cds. PRGD_OTU147_7f3fa9e81666e4c2c69081fd5cf25597, putative proteorhodopsin gene, partial cds. KJ929535 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937), Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508) CTTATAACAGTACCTCTACAAATAGTTGAATTCTATCTCATCTTAGCTGCTGTTACTGTAGTTAGGGTAAATGTTTTCTGGAAGCTTCTAACTGCATCAATAGTTATGTTGGTTGGTGGTTACATGGGTGAGGCTGGATACATTAGTGCAAGTCTGGGATTTATTATAGGAATGGCTGGTTGGTTGTTCATAATATACGAGATCTTTATAGGTGAAGCCTCTAAGGTTAATGCTTCAAGTGGCAGTATTGCATCCCAAAAAGCGTTTAAAACAATTAGAGCAATTGTTACTTTT LITVPLQIVEFYLILAAVTVVRVNVFWKLLTASIVMLVGGYMGEAGYISASLGFIIGMAGWLFIIYEIFIGEASKVNASSGSIASQKAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATAACAGTACCTCTACAAATAGTTGAATTCTATCTCATCTTAGCTGCT---------GTT---ACTGTAGTTAGGGTA---AATGTT------------------------------------TTCTGGAAG---CTTCTAACTGCATCAATAGTTATGTTGGTTGGTGGTTACATGGGTGAG---------GCT------------------GGA------TAC---------------------------------ATT------------------------------------------------------------------AGTGCA------------------AGTCTGGGA---TTTATTATAGGAATGGCTGGTTGGTTGTTCATAATATACGAGATC---------------TTT------ATA---GGTGAAGCCTCTAAGGTTAATGCTTCA------AGT---GGCAGTATTGCATCC---CAA---AAA---GCG---TTT---AAA---ACAATT---AGAGCAATTGTTACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVRV-NV------------FWK-LLTASIVMLVGGYMGE---A------G--Y-----------I----------------------SA------SLG-FIIGMAGWLFIIYEI-----F--I-GEASKVNAS--S-GSIAS-Q-K-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ929347 [I-Planctomycetes-b] PRGD_OTU108_89894cb5d70632705fa8e88a89f44b48 gb|KJ929347| PRGD_OTU108_89894cb5d70632705fa8e88a89f44b48, putative proteorhodopsin gene, partial cds. PRGD_OTU108_89894cb5d70632705fa8e88a89f44b48, putative proteorhodopsin gene, partial cds. KJ929347 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTAATAACCGTTCCCCTGCAAATCATTGAGTTTTACTTAATCCTTGCTGCAGTAACTGTTGTAAAACCTGAAATTTTTTGGAGACTTCTTTCTGCCTCCCTCATAATGTTGATAGGTGGATATGCCGGTGAGGCTGGCTATTGGGAAGTAGGTCCTGCATTTGCAATCGGAATGGCCGGATGGATTTATATTATTTGGCAAATCTTCTCGGGTCCTGCCGCACAAGCTAACGCAGCGAGTGGGAATGCGTCTTCGCAGTTTGCGTTTAAAACGATCCGTAACATTGTGACCTTT LITVPLQIIEFYLILAAVTVVKPEIFWRLLSASLIMLIGGYAGEAGYWEVGPAFAIGMAGWIYIIWQIFSGPAAQANAASGNASSQFAFKTIRNIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACCGTTCCCCTGCAAATCATTGAGTTTTACTTAATCCTTGCTGCA---------GTA---ACTGTTGTAAAACCT---GAAATT------------------------------------TTTTGGAGA---CTTCTTTCTGCCTCCCTCATAATGTTGATAGGTGGATATGCCGGTGAG---------GCT------------------GGC------TAT---------------------------------TGG------------------------------------------------------------------GAAGTA------------------GGTCCTGCA---TTTGCAATCGGAATGGCCGGATGGATTTATATTATTTGGCAAATC---------------TTC------TCG---GGTCCTGCCGCACAAGCTAACGCAGCG------AGT---GGGAATGCGTCTTCG---CAG---TTT---GCG---TTT---AAA---ACGATC---CGTAACATTGTGACCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLILAA---V-TVVKP-EI------------FWR-LLSASLIMLIGGYAGE---A------G--Y-----------W----------------------EV------GPA-FAIGMAGWIYIIWQI-----F--S-GPAAQANAA--S-GNASS-Q-F-A-F-K-TI-RNIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ929348 [I-Planctomycetes-b] PRGD_OTU108_b1e7da6f101458c12c54cadb774fc555 gb|KJ929348| PRGD_OTU108_b1e7da6f101458c12c54cadb774fc555, putative proteorhodopsin gene, partial cds. PRGD_OTU108_b1e7da6f101458c12c54cadb774fc555, putative proteorhodopsin gene, partial cds. KJ929348 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTAATAACCGTTCCCCTGCAAATCATTGAGTTTTACTTAATCCTTGCTGCAGTAACTGTTGTAAAACCTGAAATTTTTTGGAGACTTCTTTCTGCCTCCCTCATAATGTTGATAGGTGGATATGCCGGTGAGGCTGGCTATTGGGAAGTAGGCCCTGCATTTGCAATCGGAATGGCCGGATGGATTTATATTATTTGGCAAATCTTCTCGGGTCCTGCCGCACAAGCTAACGAAGCGAGTGGGAATGCGTCTTCGCAGTTTGCGTTTAAAACGATCCGTAACATTGTGACCTTT LITVPLQIIEFYLILAAVTVVKPEIFWRLLSASLIMLIGGYAGEAGYWEVGPAFAIGMAGWIYIIWQIFSGPAAQANEASGNASSQFAFKTIRNIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACCGTTCCCCTGCAAATCATTGAGTTTTACTTAATCCTTGCTGCA---------GTA---ACTGTTGTAAAACCT---GAAATT------------------------------------TTTTGGAGA---CTTCTTTCTGCCTCCCTCATAATGTTGATAGGTGGATATGCCGGTGAG---------GCT------------------GGC------TAT---------------------------------TGG------------------------------------------------------------------GAAGTA------------------GGCCCTGCA---TTTGCAATCGGAATGGCCGGATGGATTTATATTATTTGGCAAATC---------------TTC------TCG---GGTCCTGCCGCACAAGCTAACGAAGCG------AGT---GGGAATGCGTCTTCG---CAG---TTT---GCG---TTT---AAA---ACGATC---CGTAACATTGTGACCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLILAA---V-TVVKP-EI------------FWR-LLSASLIMLIGGYAGE---A------G--Y-----------W----------------------EV------GPA-FAIGMAGWIYIIWQI-----F--S-GPAAQANEA--S-GNASS-Q-F-A-F-K-TI-RNIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ929345 [I-Planctomycetes-b] PRGD_OTU108_20b1301e66a650091aa374772d3c767a gb|KJ929345| PRGD_OTU108_20b1301e66a650091aa374772d3c767a, putative proteorhodopsin gene, partial cds. PRGD_OTU108_20b1301e66a650091aa374772d3c767a, putative proteorhodopsin gene, partial cds. KJ929345 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATAACCGTTCCCTTGCAAATTATTGAGTTTTACTTAATACTAGCTGCAGTAACTGTTGTAAAACCTGAAATTTTTTGGAGACTTCTTTCTGCCTCCCTCATAATGTTGATAGGTGGATATGCCGGTGAGGCTGGCTATTGGGAAGTAGGTCCTGCATTTGCAATCGGAATGGCCGGATGGATTTATATTATTTGGCAAATTTTCTCGGGTCCTGCCGCTCAAGCTAACGAAGCAAGTGGGAATGCGTCTTCACAGTTTGCGTTTAAAACGATCCGTAACATCGTAACATTT LITVPLQIIEFYLILAAVTVVKPEIFWRLLSASLIMLIGGYAGEAGYWEVGPAFAIGMAGWIYIIWQIFSGPAAQANEASGNASSQFAFKTIRNIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACCGTTCCCTTGCAAATTATTGAGTTTTACTTAATACTAGCTGCA---------GTA---ACTGTTGTAAAACCT---GAAATT------------------------------------TTTTGGAGA---CTTCTTTCTGCCTCCCTCATAATGTTGATAGGTGGATATGCCGGTGAG---------GCT------------------GGC------TAT---------------------------------TGG------------------------------------------------------------------GAAGTA------------------GGTCCTGCA---TTTGCAATCGGAATGGCCGGATGGATTTATATTATTTGGCAAATT---------------TTC------TCG---GGTCCTGCCGCTCAAGCTAACGAAGCA------AGT---GGGAATGCGTCTTCA---CAG---TTT---GCG---TTT---AAA---ACGATC---CGTAACATCGTAACATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLILAA---V-TVVKP-EI------------FWR-LLSASLIMLIGGYAGE---A------G--Y-----------W----------------------EV------GPA-FAIGMAGWIYIIWQI-----F--S-GPAAQANEA--S-GNASS-Q-F-A-F-K-TI-RNIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ929346 [I-Planctomycetes-b] PRGD_OTU108_31988ef685f0bceb5509a7e3676d6aac gb|KJ929346| PRGD_OTU108_31988ef685f0bceb5509a7e3676d6aac, putative proteorhodopsin gene, partial cds. PRGD_OTU108_31988ef685f0bceb5509a7e3676d6aac, putative proteorhodopsin gene, partial cds. KJ929346 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATAACCGTTCCCCTGCAAATCATTGAGTTTTACTTAATCCTTGCTGCAGTAACCGTTGTAAAACCTGAAATTTTTTGGAGACTTCTTACTGCCTCCCTTGTAATGTTGATAGGTGGATATGCCGGTGAGGCTGGCTATTGGCCTGTAGGACCTGCATTTGCAGTCGGAATGGCTGGCTGGATTTATATTATTTGGCAAATTTTCTCGGGTCCTGCCGCTCAAGCTAACGAAGCAAGTGGGAATGCATCTTCACAGTTTGCTTTTAAAACGATCCGTAACATTGTGACATTT LITVPLQIIEFYLILAAVTVVKPEIFWRLLTASLVMLIGGYAGEAGYWPVGPAFAVGMAGWIYIIWQIFSGPAAQANEASGNASSQFAFKTIRNIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACCGTTCCCCTGCAAATCATTGAGTTTTACTTAATCCTTGCTGCA---------GTA---ACCGTTGTAAAACCT---GAAATT------------------------------------TTTTGGAGA---CTTCTTACTGCCTCCCTTGTAATGTTGATAGGTGGATATGCCGGTGAG---------GCT------------------GGC------TAT---------------------------------TGG------------------------------------------------------------------CCTGTA------------------GGACCTGCA---TTTGCAGTCGGAATGGCTGGCTGGATTTATATTATTTGGCAAATT---------------TTC------TCG---GGTCCTGCCGCTCAAGCTAACGAAGCA------AGT---GGGAATGCATCTTCA---CAG---TTT---GCT---TTT---AAA---ACGATC---CGTAACATTGTGACATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLILAA---V-TVVKP-EI------------FWR-LLTASLVMLIGGYAGE---A------G--Y-----------W----------------------PV------GPA-FAVGMAGWIYIIWQI-----F--S-GPAAQANEA--S-GNASS-Q-F-A-F-K-TI-RNIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ929349 [I-Planctomycetes-b] PRGD_OTU108_ede453c9159a7aafeef147b13295c87b gb|KJ929349| PRGD_OTU108_ede453c9159a7aafeef147b13295c87b, putative proteorhodopsin gene, partial cds. PRGD_OTU108_ede453c9159a7aafeef147b13295c87b, putative proteorhodopsin gene, partial cds. KJ929349 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Pacific side (69.5142, -133.4185) TTAATAACCGTTCCCCTGCAAATCATTGAGTTTTACTTAATCCTTGCTGCAGTAACCGTTGTAAAACCTGAAATTTTTTGGAGACTTCTTACTGCCTCCCTTGTAATGTTGATAGGTGGATATGCCGGTGAGGCTGGCTACTGGCCTGTAGGACCTGCATTTGCAGTCGGAATGGCTGGCTGGATTTATATTATTTGGCAAATTTTCTCGGGTCCTGCCGCTCAAGCTAACGAAGCAAGTGGGAACGCATCTTCACAGTTTGCTTTTAAAACTATCCGTAACATTGTGACATTT LITVPLQIIEFYLILAAVTVVKPEIFWRLLTASLVMLIGGYAGEAGYWPVGPAFAVGMAGWIYIIWQIFSGPAAQANEASGNASSQFAFKTIRNIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACCGTTCCCCTGCAAATCATTGAGTTTTACTTAATCCTTGCTGCA---------GTA---ACCGTTGTAAAACCT---GAAATT------------------------------------TTTTGGAGA---CTTCTTACTGCCTCCCTTGTAATGTTGATAGGTGGATATGCCGGTGAG---------GCT------------------GGC------TAC---------------------------------TGG------------------------------------------------------------------CCTGTA------------------GGACCTGCA---TTTGCAGTCGGAATGGCTGGCTGGATTTATATTATTTGGCAAATT---------------TTC------TCG---GGTCCTGCCGCTCAAGCTAACGAAGCA------AGT---GGGAACGCATCTTCA---CAG---TTT---GCT---TTT---AAA---ACTATC---CGTAACATTGTGACATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLILAA---V-TVVKP-EI------------FWR-LLTASLVMLIGGYAGE---A------G--Y-----------W----------------------PV------GPA-FAVGMAGWIYIIWQI-----F--S-GPAAQANEA--S-GNASS-Q-F-A-F-K-TI-RNIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ929344 [I-Planctomycetes-b] PRGD_OTU108_otuREP_81036832cbfb6d87438fc10b2392955e gb|KJ929344| PRGD_OTU108_otuREP_81036832cbfb6d87438fc10b2392955e, putative proteorhodopsin gene, partial cds. PRGD_OTU108_otuREP_81036832cbfb6d87438fc10b2392955e, putative proteorhodopsin gene, partial cds. KJ929344 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTAATAACCGTTCCCCTGCAAATCATTGAGTTTTACTTAATCCTTGCTGCAGTAACCGTTGTAAAACCTGAAATTTTTTGGAGACTTCTTACTGCCTCCCTCGTAATGTTGATAGGTGGATATGCCGGTGAGGCTGGCTACTGGCCTGTAGGACCTGCATTTGCAGTCGGAATGGCCGGATGGATTTATATTATTTGGCAAATTTTCTCGGGTCCTGCTGCTCAAGCTAACGAAGCAAGTGGGAATGCATCTTCACAGTTTGCGTTTAAAACGATCCGTAACATTGTGACATTT LITVPLQIIEFYLILAAVTVVKPEIFWRLLTASLVMLIGGYAGEAGYWPVGPAFAVGMAGWIYIIWQIFSGPAAQANEASGNASSQFAFKTIRNIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACCGTTCCCCTGCAAATCATTGAGTTTTACTTAATCCTTGCTGCA---------GTA---ACCGTTGTAAAACCT---GAAATT------------------------------------TTTTGGAGA---CTTCTTACTGCCTCCCTCGTAATGTTGATAGGTGGATATGCCGGTGAG---------GCT------------------GGC------TAC---------------------------------TGG------------------------------------------------------------------CCTGTA------------------GGACCTGCA---TTTGCAGTCGGAATGGCCGGATGGATTTATATTATTTGGCAAATT---------------TTC------TCG---GGTCCTGCTGCTCAAGCTAACGAAGCA------AGT---GGGAATGCATCTTCA---CAG---TTT---GCG---TTT---AAA---ACGATC---CGTAACATTGTGACATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLILAA---V-TVVKP-EI------------FWR-LLTASLVMLIGGYAGE---A------G--Y-----------W----------------------PV------GPA-FAVGMAGWIYIIWQI-----F--S-GPAAQANEA--S-GNASS-Q-F-A-F-K-TI-RNIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ929061 [I-Planctomycetes-b] PRGD_OTU072_1270953727f41dc43caf273dceb646e5 gb|KJ929061| PRGD_OTU072_1270953727f41dc43caf273dceb646e5, putative proteorhodopsin gene, partial cds. PRGD_OTU072_1270953727f41dc43caf273dceb646e5, putative proteorhodopsin gene, partial cds. KJ929061 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACCGTGCCCCTGCAAATCGTTGAGTTTTACTTGATTCTTGCTGCGGTTACGGTTGTTAAAGCAGAACTTTTCTGGAAACTTCTGGTTGCCTCCCTTGTCATGTTGGTTGGTGGATACGCGGGCGAAGCTGGTTACATGGATGCAACCCCCGCATTCTTAATCGGAATGGCCGGCTGGATCTACATCATCATACAGATTTTCAACGGAGACGCTGCCAAGATCAACGAGGCGAGCGGCAACGCAGCCTGTCAACAAGCATTCAAGACTATCCGTGCAATCGTCACTTTT LITVPLQIVEFYLILAAVTVVKAELFWKLLVASLVMLVGGYAGEAGYMDATPAFLIGMAGWIYIIIQIFNGDAAKINEASGNAACQQAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTGCCCCTGCAAATCGTTGAGTTTTACTTGATTCTTGCTGCG---------GTT---ACGGTTGTTAAAGCA---GAACTT------------------------------------TTCTGGAAA---CTTCTGGTTGCCTCCCTTGTCATGTTGGTTGGTGGATACGCGGGCGAA---------GCT------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GATGCA------------------ACCCCCGCA---TTCTTAATCGGAATGGCCGGCTGGATCTACATCATCATACAGATT---------------TTC------AAC---GGAGACGCTGCCAAGATCAACGAGGCG------AGC---GGCAACGCAGCCTGT---CAA---CAA---GCA---TTC---AAG---ACTATC---CGTGCAATCGTCACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVKA-EL------------FWK-LLVASLVMLVGGYAGE---A------G--Y-----------M----------------------DA------TPA-FLIGMAGWIYIIIQI-----F--N-GDAAKINEA--S-GNAAC-Q-Q-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ929068 [I-Planctomycetes-b] PRGD_OTU072_aff4cd0d71577fffc632cbffe8ceb5b6 gb|KJ929068| PRGD_OTU072_aff4cd0d71577fffc632cbffe8ceb5b6, putative proteorhodopsin gene, partial cds. PRGD_OTU072_aff4cd0d71577fffc632cbffe8ceb5b6, putative proteorhodopsin gene, partial cds. KJ929068 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACTGTTCCCTTACAAATTGTTGAATTTTACTTAATCCTTGCAGCGGTTACTGTTGTTAAAGCAGAACTTTTCTGGAAACTGTTGATTGCATCACTGGTGATGTTGATTGGTGGATACATGGGAGAAGCTGGATACATGGAAGCTAATCCTGCATTTCTCATCGGTATGGCCGGTTGGATTTACATCATCTATGAAATCTTTAATGGTGACGCCTCCAAGATCAACGAAGGGAGCGGAAACGCTGCTTCTCAGCAGGCATTCAGAACTATCCGTGCGATCGTGACTTTT LITVPLQIVEFYLILAAVTVVKAELFWKLLIASLVMLIGGYMGEAGYMEANPAFLIGMAGWIYIIYEIFNGDASKINEGSGNAASQQAFRTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTTCCCTTACAAATTGTTGAATTTTACTTAATCCTTGCAGCG---------GTT---ACTGTTGTTAAAGCA---GAACTT------------------------------------TTCTGGAAA---CTGTTGATTGCATCACTGGTGATGTTGATTGGTGGATACATGGGAGAA---------GCT------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------GAAGCT------------------AATCCTGCA---TTTCTCATCGGTATGGCCGGTTGGATTTACATCATCTATGAAATC---------------TTT------AAT---GGTGACGCCTCCAAGATCAACGAAGGG------AGC---GGAAACGCTGCTTCT---CAG---CAG---GCA---TTC---AGA---ACTATC---CGTGCGATCGTGACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVKA-EL------------FWK-LLIASLVMLIGGYMGE---A------G--Y-----------M----------------------EA------NPA-FLIGMAGWIYIIYEI-----F--N-GDASKINEG--S-GNAAS-Q-Q-A-F-R-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ929060 [I-Planctomycetes-b] PRGD_OTU072_otuREP_f6d18ced147edd133aa49d994c62c277 gb|KJ929060| PRGD_OTU072_otuREP_f6d18ced147edd133aa49d994c62c277, putative proteorhodopsin gene, partial cds. PRGD_OTU072_otuREP_f6d18ced147edd133aa49d994c62c277, putative proteorhodopsin gene, partial cds. KJ929060 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Atlantic side (73.9992, 19.2097), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATCACTGTACCCTTACAAATTGTTGAATTTTACTTAATCCTTGCAGCGGTTACTGTTGTTAAAGCAGAACTTTTCTGGAAACTGTTGATTGCATCACTGGTGATGTTGATTGGTGGATACATGGGAGAAGCTGGATACATGGAAGCTAATCCTGCATTTCTCATCGGTATGGCCGGTTGGATTTACATCATCTATGAAATCTTTAATGGTGACGCCTCCAAGATCAACGAAGGGAGCGGAAACGCTGCTTCTCAGCAGGCATTCAAGACTATTCGTGCGATCGTGACTTTT LITVPLQIVEFYLILAAVTVVKAELFWKLLIASLVMLIGGYMGEAGYMEANPAFLIGMAGWIYIIYEIFNGDASKINEGSGNAASQQAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTACCCTTACAAATTGTTGAATTTTACTTAATCCTTGCAGCG---------GTT---ACTGTTGTTAAAGCA---GAACTT------------------------------------TTCTGGAAA---CTGTTGATTGCATCACTGGTGATGTTGATTGGTGGATACATGGGAGAA---------GCT------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------GAAGCT------------------AATCCTGCA---TTTCTCATCGGTATGGCCGGTTGGATTTACATCATCTATGAAATC---------------TTT------AAT---GGTGACGCCTCCAAGATCAACGAAGGG------AGC---GGAAACGCTGCTTCT---CAG---CAG---GCA---TTC---AAG---ACTATT---CGTGCGATCGTGACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVKA-EL------------FWK-LLIASLVMLIGGYMGE---A------G--Y-----------M----------------------EA------NPA-FLIGMAGWIYIIYEI-----F--N-GDASKINEG--S-GNAAS-Q-Q-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ929069 [I-Planctomycetes-b] PRGD_OTU072_b2d05f92ff474f03019e8eab9b907d73 gb|KJ929069| PRGD_OTU072_b2d05f92ff474f03019e8eab9b907d73, putative proteorhodopsin gene, partial cds. PRGD_OTU072_b2d05f92ff474f03019e8eab9b907d73, putative proteorhodopsin gene, partial cds. KJ929069 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACCGTACCCTTACAAATTGTTGAATTTTACTTAATCCTAGCCGCAGTTACTGTTGTGAAGGCAGAACTTTTCTGGAAACTGCTGATTGCATCACTGGTGATGTTAATTGGCGGATACATGGGAGAAGCTGGATACATGGAAGCTAACCCTGCATTCCTCATCGGAATGGCCGGATGGATTTATATCATCTATGAAATCTTTAATGGTGACGCCTCCAAGATCAACGAAGGAAGCGGAAACGCTGCTTCTCAGCAGGCATTCAAGACTATTCGTGCGATCGTGACTTTT LITVPLQIVEFYLILAAVTVVKAELFWKLLIASLVMLIGGYMGEAGYMEANPAFLIGMAGWIYIIYEIFNGDASKINEGSGNAASQQAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTACCCTTACAAATTGTTGAATTTTACTTAATCCTAGCCGCA---------GTT---ACTGTTGTGAAGGCA---GAACTT------------------------------------TTCTGGAAA---CTGCTGATTGCATCACTGGTGATGTTAATTGGCGGATACATGGGAGAA---------GCT------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------GAAGCT------------------AACCCTGCA---TTCCTCATCGGAATGGCCGGATGGATTTATATCATCTATGAAATC---------------TTT------AAT---GGTGACGCCTCCAAGATCAACGAAGGA------AGC---GGAAACGCTGCTTCT---CAG---CAG---GCA---TTC---AAG---ACTATT---CGTGCGATCGTGACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVKA-EL------------FWK-LLIASLVMLIGGYMGE---A------G--Y-----------M----------------------EA------NPA-FLIGMAGWIYIIYEI-----F--N-GDASKINEG--S-GNAAS-Q-Q-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ929062 [I-Planctomycetes-b] PRGD_OTU072_1c28c9456e191bc2b7e848db3f71d68f gb|KJ929062| PRGD_OTU072_1c28c9456e191bc2b7e848db3f71d68f, putative proteorhodopsin gene, partial cds. PRGD_OTU072_1c28c9456e191bc2b7e848db3f71d68f, putative proteorhodopsin gene, partial cds. KJ929062 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACTGTACCCTTACAAATTGTTGAATTTTACTTAATCCTTGCTGCGGTTACTGTTGTTAAAGCAGAACTTTTCTGGAAACTGCTAATTGCATCACTGGTAATGTTAATTGGTGGATACATGGGAGAAGCTGGATACATGGAAGCTAATCCTGCATTTCTCATCGGTATGGCCGGATGGATTTACATCATCTATGAAATCTTTAATGGTGACGCCTCCAAGATCAACGAAGGAAGTGGAAACCCTGCTTCTCAGCAGGCATTCAAGACTATTCGTGCAATCGTGACTTTT LITVPLQIVEFYLILAAVTVVKAELFWKLLIASLVMLIGGYMGEAGYMEANPAFLIGMAGWIYIIYEIFNGDASKINEGSGNPASQQAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTACCCTTACAAATTGTTGAATTTTACTTAATCCTTGCTGCG---------GTT---ACTGTTGTTAAAGCA---GAACTT------------------------------------TTCTGGAAA---CTGCTAATTGCATCACTGGTAATGTTAATTGGTGGATACATGGGAGAA---------GCT------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------GAAGCT------------------AATCCTGCA---TTTCTCATCGGTATGGCCGGATGGATTTACATCATCTATGAAATC---------------TTT------AAT---GGTGACGCCTCCAAGATCAACGAAGGA------AGT---GGAAACCCTGCTTCT---CAG---CAG---GCA---TTC---AAG---ACTATT---CGTGCAATCGTGACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVKA-EL------------FWK-LLIASLVMLIGGYMGE---A------G--Y-----------M----------------------EA------NPA-FLIGMAGWIYIIYEI-----F--N-GDASKINEG--S-GNPAS-Q-Q-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ929063 [I-Planctomycetes-b] PRGD_OTU072_503bc398116a0f4ab2414b65c149c0ad gb|KJ929063| PRGD_OTU072_503bc398116a0f4ab2414b65c149c0ad, putative proteorhodopsin gene, partial cds. PRGD_OTU072_503bc398116a0f4ab2414b65c149c0ad, putative proteorhodopsin gene, partial cds. KJ929063 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-33.28, 45.35) TTGATCACTGTACCCTTACAAATTGTTGAATTTTACTTAATCCTTGCTGCGGTTACTGTTGTTAAAGCAGAACTTTTCTGGAAACTGCTAATTGCATCACTGGTAATGTTAATTGGTGGATACATGGGAGAAGCTGGATACATGGAAGCTAATCCTGCATTTCTCATCGGTATGGCCGGATGGATTTACATTATCTTTCAAATCTTTAATGGTGACGCCGCCAAGATCAACGAAGGTAGCGGAAACCCTGCTTCTCAACAAGCTTTCAGAACTATCCGTGCGATCGTGACATTT LITVPLQIVEFYLILAAVTVVKAELFWKLLIASLVMLIGGYMGEAGYMEANPAFLIGMAGWIYIIFQIFNGDAAKINEGSGNPASQQAFRTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTACCCTTACAAATTGTTGAATTTTACTTAATCCTTGCTGCG---------GTT---ACTGTTGTTAAAGCA---GAACTT------------------------------------TTCTGGAAA---CTGCTAATTGCATCACTGGTAATGTTAATTGGTGGATACATGGGAGAA---------GCT------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------GAAGCT------------------AATCCTGCA---TTTCTCATCGGTATGGCCGGATGGATTTACATTATCTTTCAAATC---------------TTT------AAT---GGTGACGCCGCCAAGATCAACGAAGGT------AGC---GGAAACCCTGCTTCT---CAA---CAA---GCT---TTC---AGA---ACTATC---CGTGCGATCGTGACATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVKA-EL------------FWK-LLIASLVMLIGGYMGE---A------G--Y-----------M----------------------EA------NPA-FLIGMAGWIYIIFQI-----F--N-GDAAKINEG--S-GNPAS-Q-Q-A-F-R-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ929067 [I-Planctomycetes-b] PRGD_OTU072_9ea948e3b268cce44abd706c60cb4f3d gb|KJ929067| PRGD_OTU072_9ea948e3b268cce44abd706c60cb4f3d, putative proteorhodopsin gene, partial cds. PRGD_OTU072_9ea948e3b268cce44abd706c60cb4f3d, putative proteorhodopsin gene, partial cds. KJ929067 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-35.05, 23.73; -33.28, 45.35) TTGATCACTGTACCCTTACAAATTGTTGAATTTTACTTAATCCTTGCTGCGGTTACTGTTGTCAAAGCAGAACTTTTCTGGAAACTGCTGATCGCATCACTGGTAATGTTAATTGGTGGATACATGGGAGAAGCTGGATACATGGAACCCAATCCTGCATTTTTCATTGGAATGGCTGGCTGGATTTACATTATCTTTCAAATCTTTAACGGTGAAGCCTCCAAGATCAACGAAGGAAGTGGAAACCCTGCTTCTCAACAAGCATTCAGAACCATCCGTGCGATTGTGACTTTT LITVPLQIVEFYLILAAVTVVKAELFWKLLIASLVMLIGGYMGEAGYMEPNPAFFIGMAGWIYIIFQIFNGEASKINEGSGNPASQQAFRTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTACCCTTACAAATTGTTGAATTTTACTTAATCCTTGCTGCG---------GTT---ACTGTTGTCAAAGCA---GAACTT------------------------------------TTCTGGAAA---CTGCTGATCGCATCACTGGTAATGTTAATTGGTGGATACATGGGAGAA---------GCT------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------GAACCC------------------AATCCTGCA---TTTTTCATTGGAATGGCTGGCTGGATTTACATTATCTTTCAAATC---------------TTT------AAC---GGTGAAGCCTCCAAGATCAACGAAGGA------AGT---GGAAACCCTGCTTCT---CAA---CAA---GCA---TTC---AGA---ACCATC---CGTGCGATTGTGACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVKA-EL------------FWK-LLIASLVMLIGGYMGE---A------G--Y-----------M----------------------EP------NPA-FFIGMAGWIYIIFQI-----F--N-GEASKINEG--S-GNPAS-Q-Q-A-F-R-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ929066 [I-Planctomycetes-b] PRGD_OTU072_93895daf0019fa07da018bbcab3898a3 gb|KJ929066| PRGD_OTU072_93895daf0019fa07da018bbcab3898a3, putative proteorhodopsin gene, partial cds. PRGD_OTU072_93895daf0019fa07da018bbcab3898a3, putative proteorhodopsin gene, partial cds. KJ929066 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) TTGATTACCGTACCTTTGCAGATTGTGGAATTTTATCTCATTTTGGCCGCAGTTACCATGGTGAAGGCCGATCTTTTTTGGAAATTGCTCATTGCATCTCTTGTCATGCTCATTGGAGGCTACATGGGTGAAGCAGGATACATGGAACCAAATCCCGCTTTTGTCATAGGGATGGCAGGATGGTTTTATATCATTTGGCAAATTTTCAAGGGTGATGCCGCGCAGATCAACGAAGCTAGCGGTAATCCTAACTCTCAGATGGCATTTAAAACCATCCGCAACATCGTGACATTT LITVPLQIVEFYLILAAVTMVKADLFWKLLIASLVMLIGGYMGEAGYMEPNPAFVIGMAGWFYIIWQIFKGDAAQINEASGNPNSQMAFKTIRNIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACCGTACCTTTGCAGATTGTGGAATTTTATCTCATTTTGGCCGCA---------GTT---ACCATGGTGAAGGCC---GATCTT------------------------------------TTTTGGAAA---TTGCTCATTGCATCTCTTGTCATGCTCATTGGAGGCTACATGGGTGAA---------GCA------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------GAACCA------------------AATCCCGCT---TTTGTCATAGGGATGGCAGGATGGTTTTATATCATTTGGCAAATT---------------TTC------AAG---GGTGATGCCGCGCAGATCAACGAAGCT------AGC---GGTAATCCTAACTCT---CAG---ATG---GCA---TTT---AAA---ACCATC---CGCAACATCGTGACATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TMVKA-DL------------FWK-LLIASLVMLIGGYMGE---A------G--Y-----------M----------------------EP------NPA-FVIGMAGWFYIIWQI-----F--K-GDAAQINEA--S-GNPNS-Q-M-A-F-K-TI-RNIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ929070 [I-Planctomycetes-b] PRGD_OTU072_c0610d619e058193853112e60e1eed1d gb|KJ929070| PRGD_OTU072_c0610d619e058193853112e60e1eed1d, putative proteorhodopsin gene, partial cds. PRGD_OTU072_c0610d619e058193853112e60e1eed1d, putative proteorhodopsin gene, partial cds. KJ929070 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATTACCGTACCTTTGCAGATTGTGGAATTTTACCTCATTTTGGCCGCAGTTACCATGGTGAAGGCCGATCTTTTTTGGAAATTGCTCATTGCATCTCTTGTCATGCTCATTGGAGGCTACATGGGTGAAGCAGGATACATGGAACCAAATCCCGCTTTTGTCATAGGCATGGCAGGATGGTTCTATATCATTTGGCAAATTTTCAAGGGTGATGCCGCGCAGATTAACGAAGCTAGCGGTAATCCTAACTCTCAGATGGCGTTTAAAACCATCCGCAACATCGTGACATTT LITVPLQIVEFYLILAAVTMVKADLFWKLLIASLVMLIGGYMGEAGYMEPNPAFVIGMAGWFYIIWQIFKGDAAQINEASGNPNSQMAFKTIRNIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACCGTACCTTTGCAGATTGTGGAATTTTACCTCATTTTGGCCGCA---------GTT---ACCATGGTGAAGGCC---GATCTT------------------------------------TTTTGGAAA---TTGCTCATTGCATCTCTTGTCATGCTCATTGGAGGCTACATGGGTGAA---------GCA------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------GAACCA------------------AATCCCGCT---TTTGTCATAGGCATGGCAGGATGGTTCTATATCATTTGGCAAATT---------------TTC------AAG---GGTGATGCCGCGCAGATTAACGAAGCT------AGC---GGTAATCCTAACTCT---CAG---ATG---GCG---TTT---AAA---ACCATC---CGCAACATCGTGACATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TMVKA-DL------------FWK-LLIASLVMLIGGYMGE---A------G--Y-----------M----------------------EP------NPA-FVIGMAGWFYIIWQI-----F--K-GDAAQINEA--S-GNPNS-Q-M-A-F-K-TI-RNIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ929064 [I-Planctomycetes-b] PRGD_OTU072_6aef00566d9f376965113a2a1a795975 gb|KJ929064| PRGD_OTU072_6aef00566d9f376965113a2a1a795975, putative proteorhodopsin gene, partial cds. PRGD_OTU072_6aef00566d9f376965113a2a1a795975, putative proteorhodopsin gene, partial cds. KJ929064 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Arctic Ocean-Pacific side (67.49, -168.12), Indian Ocean (-23.5956, 69.0419) TTGATTACCGTACCTTTGCAGATTGTGGAATTTTACCTCATTCTGGCCGCAGTTACCATGGTGAAGGCCGATCTTTTTTGGAAATTGCTCATTGCATCTCTTGTTATGCTCATTGGAGGCTACATGGGTGAAGCAGGATACATGGAACCAAATCCCGCTTTTGTCATAGGGATGGCAGGATGGTTTTATATCATTTGGCAAATTTTCAAGGGTGATGCCGCGCAGATCAACGAAGCTAGCGGTAATCCTAACTCTCAGATGGCGTTTAAAACCATCCGCAACATCGTGACATTT LITVPLQIVEFYLILAAVTMVKADLFWKLLIASLVMLIGGYMGEAGYMEPNPAFVIGMAGWFYIIWQIFKGDAAQINEASGNPNSQMAFKTIRNIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACCGTACCTTTGCAGATTGTGGAATTTTACCTCATTCTGGCCGCA---------GTT---ACCATGGTGAAGGCC---GATCTT------------------------------------TTTTGGAAA---TTGCTCATTGCATCTCTTGTTATGCTCATTGGAGGCTACATGGGTGAA---------GCA------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------GAACCA------------------AATCCCGCT---TTTGTCATAGGGATGGCAGGATGGTTTTATATCATTTGGCAAATT---------------TTC------AAG---GGTGATGCCGCGCAGATCAACGAAGCT------AGC---GGTAATCCTAACTCT---CAG---ATG---GCG---TTT---AAA---ACCATC---CGCAACATCGTGACATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TMVKA-DL------------FWK-LLIASLVMLIGGYMGE---A------G--Y-----------M----------------------EP------NPA-FVIGMAGWFYIIWQI-----F--K-GDAAQINEA--S-GNPNS-Q-M-A-F-K-TI-RNIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ929065 [I-Planctomycetes-b] PRGD_OTU072_8f756f4babeea5699dcf9b9462dac17b gb|KJ929065| PRGD_OTU072_8f756f4babeea5699dcf9b9462dac17b, putative proteorhodopsin gene, partial cds. PRGD_OTU072_8f756f4babeea5699dcf9b9462dac17b, putative proteorhodopsin gene, partial cds. KJ929065 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATTACCGTACCTTTGCAGATTGTGGAATTTTACCTCATTTTGGCCGCAGTTACCATGGTGAAGGCCGATCTTTTTTGGAAATTGCTCATTGCATCTCTTGTTATGCTCATTGGAGGCTATATGGGTGAAGCAGGATACATGGAACCAAACCCCGCTTTTGTCATAGGTATGGCAGGATGGTTTTATATCATTTGGCAAATTTTCAAGGGTGATGCCGCGCAGATCAACGAAGCTAGCGGCAATCCTAACTCTCAGATGGCGTTTAAAACCATCCGCAACATCGTGACATTT LITVPLQIVEFYLILAAVTMVKADLFWKLLIASLVMLIGGYMGEAGYMEPNPAFVIGMAGWFYIIWQIFKGDAAQINEASGNPNSQMAFKTIRNIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACCGTACCTTTGCAGATTGTGGAATTTTACCTCATTTTGGCCGCA---------GTT---ACCATGGTGAAGGCC---GATCTT------------------------------------TTTTGGAAA---TTGCTCATTGCATCTCTTGTTATGCTCATTGGAGGCTATATGGGTGAA---------GCA------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------GAACCA------------------AACCCCGCT---TTTGTCATAGGTATGGCAGGATGGTTTTATATCATTTGGCAAATT---------------TTC------AAG---GGTGATGCCGCGCAGATCAACGAAGCT------AGC---GGCAATCCTAACTCT---CAG---ATG---GCG---TTT---AAA---ACCATC---CGCAACATCGTGACATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TMVKA-DL------------FWK-LLIASLVMLIGGYMGE---A------G--Y-----------M----------------------EP------NPA-FVIGMAGWFYIIWQI-----F--K-GDAAQINEA--S-GNPNS-Q-M-A-F-K-TI-RNIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ929276 [I-Planctomycetes-b] PRGD_OTU097_otuREP_77f83d0bc23c8280a9ada9b94e1fddb5 gb|KJ929276| PRGD_OTU097_otuREP_77f83d0bc23c8280a9ada9b94e1fddb5, putative proteorhodopsin gene, partial cds. PRGD_OTU097_otuREP_77f83d0bc23c8280a9ada9b94e1fddb5, putative proteorhodopsin gene, partial cds. KJ929276 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) CTGATCACAGTACCTCTTCAAATTGTTGAATTTTACATCATCTTGGCAGCAGTCACCAAGGTCAGCGTTGATCTTTTCTGGAAGCTTCTCATTGCATCTCTTGTTATGCTCGTCGGTGGTTACGCAGGTGAAGCCGGTTACATGGATGTCATGCCCGCATTTGTCATTGGTATGGCTGGCTGGCTTTACATTATCCACTCCATCTTTAAGGGCGAAGCCGCTAAGATTAATGAGCAAAGCGGTAACCCTGCTTCTCAACAAGCTTTCAGAACGATTCGTGCGATTGTCACCTTC LITVPLQIVEFYIILAAVTKVSVDLFWKLLIASLVMLVGGYAGEAGYMDVMPAFVIGMAGWLYIIHSIFKGEAAKINEQSGNPASQQAFRTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTACCTCTTCAAATTGTTGAATTTTACATCATCTTGGCAGCA---------GTC---ACCAAGGTCAGCGTT---GATCTT------------------------------------TTCTGGAAG---CTTCTCATTGCATCTCTTGTTATGCTCGTCGGTGGTTACGCAGGTGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GATGTC------------------ATGCCCGCA---TTTGTCATTGGTATGGCTGGCTGGCTTTACATTATCCACTCCATC---------------TTT------AAG---GGCGAAGCCGCTAAGATTAATGAGCAA------AGC---GGTAACCCTGCTTCT---CAA---CAA---GCT---TTC---AGA---ACGATT---CGTGCGATTGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYIILAA---V-TKVSV-DL------------FWK-LLIASLVMLVGGYAGE---A------G--Y-----------M----------------------DV------MPA-FVIGMAGWLYIIHSI-----F--K-GEAAKINEQ--S-GNPAS-Q-Q-A-F-R-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ929278 [I-Planctomycetes-b] PRGD_OTU097_80ccec57c8d290cbc3d83b12646f6262 gb|KJ929278| PRGD_OTU097_80ccec57c8d290cbc3d83b12646f6262, putative proteorhodopsin gene, partial cds. PRGD_OTU097_80ccec57c8d290cbc3d83b12646f6262, putative proteorhodopsin gene, partial cds. KJ929278 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATCACAGTACCTCTTCAAATTGTTGAATTTTACATCATCTTGGCAGCAGTCACCAAGGTAAGCGTTGATCTTTTCTGGAAGCTTCTCATTGCATCTCTTGTTATGCTCGTCGGTGGTTACGCAGGTGAAGCCGGTTACATGGATGTCATGCCCGCATTTGTCATTGGTATGGCTGGCTGGCTTTACATTATACACTCCATCTTTAAGGGCGAAGCCGCTAAGATTAATGAGCAAAGCGGTAACCCTGCTTCTCAACAAGCTTTCAGAACGATTCGTGCGATTGTCACCTTC LITVPLQIVEFYIILAAVTKVSVDLFWKLLIASLVMLVGGYAGEAGYMDVMPAFVIGMAGWLYIIHSIFKGEAAKINEQSGNPASQQAFRTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTACCTCTTCAAATTGTTGAATTTTACATCATCTTGGCAGCA---------GTC---ACCAAGGTAAGCGTT---GATCTT------------------------------------TTCTGGAAG---CTTCTCATTGCATCTCTTGTTATGCTCGTCGGTGGTTACGCAGGTGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GATGTC------------------ATGCCCGCA---TTTGTCATTGGTATGGCTGGCTGGCTTTACATTATACACTCCATC---------------TTT------AAG---GGCGAAGCCGCTAAGATTAATGAGCAA------AGC---GGTAACCCTGCTTCT---CAA---CAA---GCT---TTC---AGA---ACGATT---CGTGCGATTGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYIILAA---V-TKVSV-DL------------FWK-LLIASLVMLVGGYAGE---A------G--Y-----------M----------------------DV------MPA-FVIGMAGWLYIIHSI-----F--K-GEAAKINEQ--S-GNPAS-Q-Q-A-F-R-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ929281 [I-Planctomycetes-b] PRGD_OTU097_cd7be54c39430828339a2a61e86ad7f3 gb|KJ929281| PRGD_OTU097_cd7be54c39430828339a2a61e86ad7f3, putative proteorhodopsin gene, partial cds. PRGD_OTU097_cd7be54c39430828339a2a61e86ad7f3, putative proteorhodopsin gene, partial cds. KJ929281 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097) CTGATCACAGTACCTCTTCAAATTGTTGAATTTTACATCATCTTGGCAGCAGTCACCAAGGTCAGCGTTGATCTTTTCTGGAAGCTTCTCATTGCATCTCTTGTTATGCTCGTCGGTGGTTACGCAGGTGAAGCCGGTTACATGGATGTCATGCCCGCATTTGTCATTGGTATGGCTGGCTGGCTTTACATTATCCACTCCATCTTTAAGGGCGAAGCCGCAAAGATTAATGAGCAAAGCGGTAACCCTGCCTCGCAACAAGCGTTTAGAACGATTCGTGCGATTGTCACCTTC LITVPLQIVEFYIILAAVTKVSVDLFWKLLIASLVMLVGGYAGEAGYMDVMPAFVIGMAGWLYIIHSIFKGEAAKINEQSGNPASQQAFRTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTACCTCTTCAAATTGTTGAATTTTACATCATCTTGGCAGCA---------GTC---ACCAAGGTCAGCGTT---GATCTT------------------------------------TTCTGGAAG---CTTCTCATTGCATCTCTTGTTATGCTCGTCGGTGGTTACGCAGGTGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GATGTC------------------ATGCCCGCA---TTTGTCATTGGTATGGCTGGCTGGCTTTACATTATCCACTCCATC---------------TTT------AAG---GGCGAAGCCGCAAAGATTAATGAGCAA------AGC---GGTAACCCTGCCTCG---CAA---CAA---GCG---TTT---AGA---ACGATT---CGTGCGATTGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYIILAA---V-TKVSV-DL------------FWK-LLIASLVMLVGGYAGE---A------G--Y-----------M----------------------DV------MPA-FVIGMAGWLYIIHSI-----F--K-GEAAKINEQ--S-GNPAS-Q-Q-A-F-R-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ929279 [I-Planctomycetes-b] PRGD_OTU097_83408f4f2d3bd0bb6a283c541a04862a gb|KJ929279| PRGD_OTU097_83408f4f2d3bd0bb6a283c541a04862a, putative proteorhodopsin gene, partial cds. PRGD_OTU097_83408f4f2d3bd0bb6a283c541a04862a, putative proteorhodopsin gene, partial cds. KJ929279 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419) CTGATCACAGTACCTCTTCAAATTGTTGAATTTTACATCATCTTGGCAGCAGTCACCAAGGTCAGCGTTGATCTTTTCTGGAAGCTTCTCATTGCATCTCTTGTTATGCTCGTCGGTGGTTACGCAGGTGAAGCCGGTTACATGGATGTCACGCCCGCATTTGTCATTGGTATGGCTGGCTGGCTTTACATCATCCACTCCATCTTTAAGGGCGAAGCCGCAAAGATTAATGAGCAAAGCGGTAACCCTGCCTCGCAACAAGCGTTTAGAACGATTCGTGCGATTGTCACCTTC LITVPLQIVEFYIILAAVTKVSVDLFWKLLIASLVMLVGGYAGEAGYMDVTPAFVIGMAGWLYIIHSIFKGEAAKINEQSGNPASQQAFRTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTACCTCTTCAAATTGTTGAATTTTACATCATCTTGGCAGCA---------GTC---ACCAAGGTCAGCGTT---GATCTT------------------------------------TTCTGGAAG---CTTCTCATTGCATCTCTTGTTATGCTCGTCGGTGGTTACGCAGGTGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GATGTC------------------ACGCCCGCA---TTTGTCATTGGTATGGCTGGCTGGCTTTACATCATCCACTCCATC---------------TTT------AAG---GGCGAAGCCGCAAAGATTAATGAGCAA------AGC---GGTAACCCTGCCTCG---CAA---CAA---GCG---TTT---AGA---ACGATT---CGTGCGATTGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYIILAA---V-TKVSV-DL------------FWK-LLIASLVMLVGGYAGE---A------G--Y-----------M----------------------DV------TPA-FVIGMAGWLYIIHSI-----F--K-GEAAKINEQ--S-GNPAS-Q-Q-A-F-R-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ929277 [I-Planctomycetes-b] PRGD_OTU097_80b19a1df58af349c25b789581b3b2bf gb|KJ929277| PRGD_OTU097_80b19a1df58af349c25b789581b3b2bf, putative proteorhodopsin gene, partial cds. PRGD_OTU097_80b19a1df58af349c25b789581b3b2bf, putative proteorhodopsin gene, partial cds. KJ929277 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) CTGATCACAGTACCTCTTCAAATTGTTGAATTCTACATTATTTTGGCTGCAGTCACCAAAGTAGGCGTTGATCTTTTCTGGAAGCTACTCATTGCATCTCTTGTCATGCTCATCGGAGGCTATGCAGGAGAAGCTGGATACATGGAAGTAGAACCTGCTTTTATCATAGGTATGGCTGGCTGGGTTTACATTATTCATTCCATCTTCAAGGGCGAAGCCGCAAAGATTAATGAGCAAAGCGGTAATCCTGCCTCCCAACAAGCGTTTAGAACGATTCGTGCGATTGTCACCTTC LITVPLQIVEFYIILAAVTKVGVDLFWKLLIASLVMLIGGYAGEAGYMEVEPAFIIGMAGWVYIIHSIFKGEAAKINEQSGNPASQQAFRTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTACCTCTTCAAATTGTTGAATTCTACATTATTTTGGCTGCA---------GTC---ACCAAAGTAGGCGTT---GATCTT------------------------------------TTCTGGAAG---CTACTCATTGCATCTCTTGTCATGCTCATCGGAGGCTATGCAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------GAAGTA------------------GAACCTGCT---TTTATCATAGGTATGGCTGGCTGGGTTTACATTATTCATTCCATC---------------TTC------AAG---GGCGAAGCCGCAAAGATTAATGAGCAA------AGC---GGTAATCCTGCCTCC---CAA---CAA---GCG---TTT---AGA---ACGATT---CGTGCGATTGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYIILAA---V-TKVGV-DL------------FWK-LLIASLVMLIGGYAGE---A------G--Y-----------M----------------------EV------EPA-FIIGMAGWVYIIHSI-----F--K-GEAAKINEQ--S-GNPAS-Q-Q-A-F-R-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ929280 [I-Planctomycetes-b] PRGD_OTU097_85f2bdf9c6e6f5e26bbd0e7d31508dce gb|KJ929280| PRGD_OTU097_85f2bdf9c6e6f5e26bbd0e7d31508dce, putative proteorhodopsin gene, partial cds. PRGD_OTU097_85f2bdf9c6e6f5e26bbd0e7d31508dce, putative proteorhodopsin gene, partial cds. KJ929280 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTGATCACAGTACCTCTTCAAATTGTTGAATTTTACATCATCTTGGCTGCAGTCACTAAGGTAAGCGTTGATCTTTTCTGGAAGCTACTCATTGCATCTCTTGTCATGCTCATCGGTGGCTATGCAGGAGAAGCTGGATACATGGAAGTAGAACCTGCCTTTATCATAGGTATGGCTGGCTGGGTTTACATTATTCATTCCATCTTTAAGGGTGAAGCAGCAAAGATTAATGAGCAAAGCGGTAACCCTGCCTCGCAACAGGCGTTTAGAACGATTCGTGCGATTGTCACCTTC LITVPLQIVEFYIILAAVTKVSVDLFWKLLIASLVMLIGGYAGEAGYMEVEPAFIIGMAGWVYIIHSIFKGEAAKINEQSGNPASQQAFRTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACAGTACCTCTTCAAATTGTTGAATTTTACATCATCTTGGCTGCA---------GTC---ACTAAGGTAAGCGTT---GATCTT------------------------------------TTCTGGAAG---CTACTCATTGCATCTCTTGTCATGCTCATCGGTGGCTATGCAGGAGAA---------GCT------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------GAAGTA------------------GAACCTGCC---TTTATCATAGGTATGGCTGGCTGGGTTTACATTATTCATTCCATC---------------TTT------AAG---GGTGAAGCAGCAAAGATTAATGAGCAA------AGC---GGTAACCCTGCCTCG---CAA---CAG---GCG---TTT---AGA---ACGATT---CGTGCGATTGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYIILAA---V-TKVSV-DL------------FWK-LLIASLVMLIGGYAGE---A------G--Y-----------M----------------------EV------EPA-FIIGMAGWVYIIHSI-----F--K-GEAAKINEQ--S-GNPAS-Q-Q-A-F-R-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ929282 [I-Planctomycetes-b] PRGD_OTU097_ee49f32127169221afb5b034d1287a51 gb|KJ929282| PRGD_OTU097_ee49f32127169221afb5b034d1287a51, putative proteorhodopsin gene, partial cds. PRGD_OTU097_ee49f32127169221afb5b034d1287a51, putative proteorhodopsin gene, partial cds. KJ929282 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATCACGGTTCCTCTTCAAATTGTTGAATTTTACATTATCTTGGCCGCAGTTACGAAAGTGAAAGCTGATCTTTTCTGGAAACTTCTCATTGCATCACTTGTTATGCTCATTGGAGGTTACGCAGGCGAAGCCGGTTACATGGATGTCACGCCCGCATTCGTCATTGGTATGGCTGGCTGGCTTTACATCATCCACTCCATCTTCAAGGGTGAAGCTGCAAAGATTAATGAACAAAGTGGTAATGCTGCCTCTCAACAAGCCTTCAGAACAATTCGTGCGATTGTCACCTTC LITVPLQIVEFYIILAAVTKVKADLFWKLLIASLVMLIGGYAGEAGYMDVTPAFVIGMAGWLYIIHSIFKGEAAKINEQSGNAASQQAFRTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACGGTTCCTCTTCAAATTGTTGAATTTTACATTATCTTGGCCGCA---------GTT---ACGAAAGTGAAAGCT---GATCTT------------------------------------TTCTGGAAA---CTTCTCATTGCATCACTTGTTATGCTCATTGGAGGTTACGCAGGCGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GATGTC------------------ACGCCCGCA---TTCGTCATTGGTATGGCTGGCTGGCTTTACATCATCCACTCCATC---------------TTC------AAG---GGTGAAGCTGCAAAGATTAATGAACAA------AGT---GGTAATGCTGCCTCT---CAA---CAA---GCC---TTC---AGA---ACAATT---CGTGCGATTGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYIILAA---V-TKVKA-DL------------FWK-LLIASLVMLIGGYAGE---A------G--Y-----------M----------------------DV------TPA-FVIGMAGWLYIIHSI-----F--K-GEAAKINEQ--S-GNAAS-Q-Q-A-F-R-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ928548 [I-Planctomycetes-b] PRGD_OTU041a_otuREP_527248c17790d541292e8158164018b2 gb|KJ928548| PRGD_OTU041a_otuREP_527248c17790d541292e8158164018b2, putative proteorhodopsin gene, partial cds. PRGD_OTU041a_otuREP_527248c17790d541292e8158164018b2, putative proteorhodopsin gene, partial cds. KJ928548 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCATAACGGTGCCCCTACAGATTATTGAGTTTTATGTAATCCTTTCTGCGGTTACCAAGGTTAAAGCCGAATTGTTCTGGAAATTACTTATCGCATCACTTGTTATGCTGATCGGTGGTTACATGGGTGAGGCTGGATATGCAGATGTTAATTCCGCATTCTTTGTAGGCATGCTCGGATGGCTTTACATTATCTATGAGATCTTCAAAGGTGAAGCTTCTCAGCTTAATGAGAACAGCGGTAATGCTGCATGCCAGCAGGCGTTTAAAACCATTCGTGCTATCGTTACTTTT LITVPLQIIEFYVILSAVTKVKAELFWKLLIASLVMLIGGYMGEAGYADVNSAFFVGMLGWLYIIYEIFKGEASQLNENSGNAACQQAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATAACGGTGCCCCTACAGATTATTGAGTTTTATGTAATCCTTTCTGCG---------GTT---ACCAAGGTTAAAGCC---GAATTG------------------------------------TTCTGGAAA---TTACTTATCGCATCACTTGTTATGCTGATCGGTGGTTACATGGGTGAG---------GCT------------------GGA------TAT---------------------------------GCA------------------------------------------------------------------GATGTT------------------AATTCCGCA---TTCTTTGTAGGCATGCTCGGATGGCTTTACATTATCTATGAGATC---------------TTC------AAA---GGTGAAGCTTCTCAGCTTAATGAGAAC------AGC---GGTAATGCTGCATGC---CAG---CAG---GCG---TTT---AAA---ACCATT---CGTGCTATCGTTACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYVILSA---V-TKVKA-EL------------FWK-LLIASLVMLIGGYMGE---A------G--Y-----------A----------------------DV------NSA-FFVGMLGWLYIIYEI-----F--K-GEASQLNEN--S-GNAAC-Q-Q-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-b]_KJ928549 [I-Planctomycetes-b] PRGD_OTU041a_7a02522d93a01afde79ed391df1e18c7 gb|KJ928549| PRGD_OTU041a_7a02522d93a01afde79ed391df1e18c7, putative proteorhodopsin gene, partial cds. PRGD_OTU041a_7a02522d93a01afde79ed391df1e18c7, putative proteorhodopsin gene, partial cds. KJ928549 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/B subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCATAACGGTGCCCCTACAGATTATTGAGTTTTATGTAATCCTTTCTGCGGTTACCAAGGTTAAAGCCGAATTGTTCTGGAAATTACTTATCGCATCACTTGTTATGCTGATCGGTGGTTACATGGGTGAGGCTGGTTATGCAGATGTTAAGTCCGCATTCTTTGTAGGCATGCTCGGATGGCTTTACATTATCTATGAGATCTTCAAAGGTGAAGCTTCTCAGCTTAATGAGAACAGCGGTAATGCTGCATGCCAGCAGGCGTTTAAAACCATTCGTGCTATCGTTACTTTT LITVPLQIIEFYVILSAVTKVKAELFWKLLIASLVMLIGGYMGEAGYADVKSAFFVGMLGWLYIIYEIFKGEASQLNENSGNAACQQAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATAACGGTGCCCCTACAGATTATTGAGTTTTATGTAATCCTTTCTGCG---------GTT---ACCAAGGTTAAAGCC---GAATTG------------------------------------TTCTGGAAA---TTACTTATCGCATCACTTGTTATGCTGATCGGTGGTTACATGGGTGAG---------GCT------------------GGT------TAT---------------------------------GCA------------------------------------------------------------------GATGTT------------------AAGTCCGCA---TTCTTTGTAGGCATGCTCGGATGGCTTTACATTATCTATGAGATC---------------TTC------AAA---GGTGAAGCTTCTCAGCTTAATGAGAAC------AGC---GGTAATGCTGCATGC---CAG---CAG---GCG---TTT---AAA---ACCATT---CGTGCTATCGTTACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYVILSA---V-TKVKA-EL------------FWK-LLIASLVMLIGGYMGE---A------G--Y-----------A----------------------DV------KSA-FFVGMLGWLYIIYEI-----F--K-GEASQLNEN--S-GNAAC-Q-Q-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-HF10_49E08]_KJ928554 [I-Planctomycetes-HF10_49E08] PRGD_OTU041b_25a515c8228c1dd1d428174935fcd309 gb|KJ928554| PRGD_OTU041b_25a515c8228c1dd1d428174935fcd309, putative proteorhodopsin gene, partial cds. PRGD_OTU041b_25a515c8228c1dd1d428174935fcd309, putative proteorhodopsin gene, partial cds. KJ928554 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/HF10_49E08-like subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster HF10_49E08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATTACTGTGCCTTTGCAGATTGTTGAATTTTACTTAATTCTTGCAGCCGTCACTAAGGTTAGTGCAAATCTTTTCTGGAAATTACTGGTAGCCTCACTCGTAATGCTAATTGGTGGGTATGCAGGAGAAGCTGGTTATGCTGATGTAGGTCCCGCTTTCTTTGTCGGAATGGCTGGATGGATTTACATCATCTATGAAATCTTTAAAGGAGAAGCTTCCCAAATCAATGAGAACAGTGGTAATGCAGCCAGTCAGCAAGCCTTCAAAACCATTCGTGCCATTGTTACCTTC LITVPLQIVEFYLILAAVTKVSANLFWKLLVASLVMLIGGYAGEAGYADVGPAFFVGMAGWIYIIYEIFKGEASQINENSGNAASQQAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTGCCTTTGCAGATTGTTGAATTTTACTTAATTCTTGCAGCC---------GTC---ACTAAGGTTAGTGCA---AATCTT------------------------------------TTCTGGAAA---TTACTGGTAGCCTCACTCGTAATGCTAATTGGTGGGTATGCAGGAGAA---------GCT------------------GGT------TAT---------------------------------GCT------------------------------------------------------------------GATGTA------------------GGTCCCGCT---TTCTTTGTCGGAATGGCTGGATGGATTTACATCATCTATGAAATC---------------TTT------AAA---GGAGAAGCTTCCCAAATCAATGAGAAC------AGT---GGTAATGCAGCCAGT---CAG---CAA---GCC---TTC---AAA---ACCATT---CGTGCCATTGTTACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TKVSA-NL------------FWK-LLVASLVMLIGGYAGE---A------G--Y-----------A----------------------DV------GPA-FFVGMAGWIYIIYEI-----F--K-GEASQINEN--S-GNAAS-Q-Q-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-HF10_49E08]_KJ928556 [I-Planctomycetes-HF10_49E08] PRGD_OTU041b_58d4d538c4866bb3cc0a05604fbbd218 gb|KJ928556| PRGD_OTU041b_58d4d538c4866bb3cc0a05604fbbd218, putative proteorhodopsin gene, partial cds. PRGD_OTU041b_58d4d538c4866bb3cc0a05604fbbd218, putative proteorhodopsin gene, partial cds. KJ928556 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/HF10_49E08-like subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster HF10_49E08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATTACTGTGCCTTTGCAGATTGTTGAATTTTACTTAATTCTTGCAGCCGTCACTAAGGTTAGTGCAAATCTTTTCTGGAAATTACTGGTAGCTTCACTCGTAATGCTAATCGGTGGGTATGCAGGGGAAGCTGGCTATGCTGATGTAGGTCCCGCTTTCTTTGTCGGAATGGCTGGATGGATTTACATCATCTATGAAATCTTTAAAGGAGAAGCTTCCCAAATCAATGAGAACAGTGGTAATGCAGCCAGTCAGCAAGCCTTCAAAACCATTCGTGCCATTGTTACCTTC LITVPLQIVEFYLILAAVTKVSANLFWKLLVASLVMLIGGYAGEAGYADVGPAFFVGMAGWIYIIYEIFKGEASQINENSGNAASQQAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTGCCTTTGCAGATTGTTGAATTTTACTTAATTCTTGCAGCC---------GTC---ACTAAGGTTAGTGCA---AATCTT------------------------------------TTCTGGAAA---TTACTGGTAGCTTCACTCGTAATGCTAATCGGTGGGTATGCAGGGGAA---------GCT------------------GGC------TAT---------------------------------GCT------------------------------------------------------------------GATGTA------------------GGTCCCGCT---TTCTTTGTCGGAATGGCTGGATGGATTTACATCATCTATGAAATC---------------TTT------AAA---GGAGAAGCTTCCCAAATCAATGAGAAC------AGT---GGTAATGCAGCCAGT---CAG---CAA---GCC---TTC---AAA---ACCATT---CGTGCCATTGTTACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TKVSA-NL------------FWK-LLVASLVMLIGGYAGE---A------G--Y-----------A----------------------DV------GPA-FFVGMAGWIYIIYEI-----F--K-GEASQINEN--S-GNAAS-Q-Q-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-HF10_49E08]_KJ928559 [I-Planctomycetes-HF10_49E08] PRGD_OTU041b_73b215d806e9c5ab9b2ae81816626463 gb|KJ928559| PRGD_OTU041b_73b215d806e9c5ab9b2ae81816626463, putative proteorhodopsin gene, partial cds. PRGD_OTU041b_73b215d806e9c5ab9b2ae81816626463, putative proteorhodopsin gene, partial cds. KJ928559 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/HF10_49E08-like subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster HF10_49E08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTGATCACCGTGCCTTTGCAAATTGTTGAGTTTTATTTAATTCTTGCAGCCGTCACTAAGGTTAGTGCAAATCTTTTCTGGAAATTACTGGTAGCTTCACTCGTAATGCTTATCGGTGGGTATGCAGGAGAAGCTGGTTATGCTGATGTAGGTCCCGCTTTCTTTGTTGGAATGGCTGGATGGATTTACATCATATATGAAATCTTTAAAGGCGAAGCATCCCAAATCAATGAGAACAGTGGTAATGCAGCCTGTCAGCAAGCCTTCAAAACCATTCGTGCCATCGTTACCTTC LITVPLQIVEFYLILAAVTKVSANLFWKLLVASLVMLIGGYAGEAGYADVGPAFFVGMAGWIYIIYEIFKGEASQINENSGNAACQQAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTGCCTTTGCAAATTGTTGAGTTTTATTTAATTCTTGCAGCC---------GTC---ACTAAGGTTAGTGCA---AATCTT------------------------------------TTCTGGAAA---TTACTGGTAGCTTCACTCGTAATGCTTATCGGTGGGTATGCAGGAGAA---------GCT------------------GGT------TAT---------------------------------GCT------------------------------------------------------------------GATGTA------------------GGTCCCGCT---TTCTTTGTTGGAATGGCTGGATGGATTTACATCATATATGAAATC---------------TTT------AAA---GGCGAAGCATCCCAAATCAATGAGAAC------AGT---GGTAATGCAGCCTGT---CAG---CAA---GCC---TTC---AAA---ACCATT---CGTGCCATCGTTACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TKVSA-NL------------FWK-LLVASLVMLIGGYAGE---A------G--Y-----------A----------------------DV------GPA-FFVGMAGWIYIIYEI-----F--K-GEASQINEN--S-GNAAC-Q-Q-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-HF10_49E08]_KJ928558 [I-Planctomycetes-HF10_49E08] PRGD_OTU041b_69016d9972d96931e51d2886316f9b04 gb|KJ928558| PRGD_OTU041b_69016d9972d96931e51d2886316f9b04, putative proteorhodopsin gene, partial cds. PRGD_OTU041b_69016d9972d96931e51d2886316f9b04, putative proteorhodopsin gene, partial cds. KJ928558 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/HF10_49E08-like subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster HF10_49E08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-14.48, 113.45; -33.28, 45.35) TTGATTACTGTGCCTTTACAAATTGTTGAGTTTTATTTAATCCTTGCAGCCGTCACTAAGGTTAGTGCTAATCTTTTCTGGAAATTATTGATAGCTTCACTCGTAATGCTAATAGGTGGGTATGCAGGAGAAGCTGGTTATGCGGATGTAGGTCCCGCATTCTTTGTTGGAATGGCTGGATGGATTTACATCATCTATGAAATCTTTAAAGGAGAAGCTTCCCAAATCAATGAGAACAGTGGTAATGCAGCCAGTCAACAAGCCTTCAAAACTATCCGTGCCATTGTTACCTTC LITVPLQIVEFYLILAAVTKVSANLFWKLLIASLVMLIGGYAGEAGYADVGPAFFVGMAGWIYIIYEIFKGEASQINENSGNAASQQAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCTTTACAAATTGTTGAGTTTTATTTAATCCTTGCAGCC---------GTC---ACTAAGGTTAGTGCT---AATCTT------------------------------------TTCTGGAAA---TTATTGATAGCTTCACTCGTAATGCTAATAGGTGGGTATGCAGGAGAA---------GCT------------------GGT------TAT---------------------------------GCG------------------------------------------------------------------GATGTA------------------GGTCCCGCA---TTCTTTGTTGGAATGGCTGGATGGATTTACATCATCTATGAAATC---------------TTT------AAA---GGAGAAGCTTCCCAAATCAATGAGAAC------AGT---GGTAATGCAGCCAGT---CAA---CAA---GCC---TTC---AAA---ACTATC---CGTGCCATTGTTACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TKVSA-NL------------FWK-LLIASLVMLIGGYAGE---A------G--Y-----------A----------------------DV------GPA-FFVGMAGWIYIIYEI-----F--K-GEASQINEN--S-GNAAS-Q-Q-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-HF10_49E08]_KJ928555 [I-Planctomycetes-HF10_49E08] PRGD_OTU041b_574d3ae09d7667fb553cadeac45c960a gb|KJ928555| PRGD_OTU041b_574d3ae09d7667fb553cadeac45c960a, putative proteorhodopsin gene, partial cds. PRGD_OTU041b_574d3ae09d7667fb553cadeac45c960a, putative proteorhodopsin gene, partial cds. KJ928555 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/HF10_49E08-like subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster HF10_49E08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTGATTACTGTGCCTTTGCAAATTGTTGAGTTTTATTTAATCCTTGCAGCCGTCACTAAGGTTAGTGCAAATCTTTTCTGGAAGTTACTAATAGCTTCACTCGTAATGCTAATCGGTGGGTATGCAGGTGAAGCTGGTTATGCTGATGTAGGTCCCGCATTCTTTGTTGGAATGGCTGGCTGGATTTACATCATCTATGAAATCTTTAAAGGAGAAGCTTCCCAAATCAATGAGAGCAGTGGTAATGTAGCCAGTCAACAAGCCTTTAAAACTATCCGTGCCATTGTTACCTTC LITVPLQIVEFYLILAAVTKVSANLFWKLLIASLVMLIGGYAGEAGYADVGPAFFVGMAGWIYIIYEIFKGEASQINESSGNVASQQAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTGCCTTTGCAAATTGTTGAGTTTTATTTAATCCTTGCAGCC---------GTC---ACTAAGGTTAGTGCA---AATCTT------------------------------------TTCTGGAAG---TTACTAATAGCTTCACTCGTAATGCTAATCGGTGGGTATGCAGGTGAA---------GCT------------------GGT------TAT---------------------------------GCT------------------------------------------------------------------GATGTA------------------GGTCCCGCA---TTCTTTGTTGGAATGGCTGGCTGGATTTACATCATCTATGAAATC---------------TTT------AAA---GGAGAAGCTTCCCAAATCAATGAGAGC------AGT---GGTAATGTAGCCAGT---CAA---CAA---GCC---TTT---AAA---ACTATC---CGTGCCATTGTTACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TKVSA-NL------------FWK-LLIASLVMLIGGYAGE---A------G--Y-----------A----------------------DV------GPA-FFVGMAGWIYIIYEI-----F--K-GEASQINES--S-GNVAS-Q-Q-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-HF10_49E08]_KJ928553 [I-Planctomycetes-HF10_49E08] PRGD_OTU041b_17d62220410c7b544f2fe56f1b8fd3c7 gb|KJ928553| PRGD_OTU041b_17d62220410c7b544f2fe56f1b8fd3c7, putative proteorhodopsin gene, partial cds. PRGD_OTU041b_17d62220410c7b544f2fe56f1b8fd3c7, putative proteorhodopsin gene, partial cds. KJ928553 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/HF10_49E08-like subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster HF10_49E08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGATTACCGTGCCTCTGCAGATAGTGGAGTTTTACCTTATTCTTGCAGCTGTCACCAAGGTAAGCGTAAATCTTTTCTGGAAACTACTCGTTGCTTCTCTTGTTATGCTTATCGGTGGGTATGCCGGTGAGGCTGGTTATGCGGATGTAGGTCCAGCATTTTTTGTTGGAATGGCAGGATGGATTTACATCATCTATGAAATCTTCAAAGGTGAAGCTTCCCAACTCAATGAGAACAGTGGTAATGCAGCCTGTCAGCAAGCTTTCAAAACCATTCGTGCCATCGTAACCTTC LITVPLQIVEFYLILAAVTKVSVNLFWKLLVASLVMLIGGYAGEAGYADVGPAFFVGMAGWIYIIYEIFKGEASQLNENSGNAACQQAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACCGTGCCTCTGCAGATAGTGGAGTTTTACCTTATTCTTGCAGCT---------GTC---ACCAAGGTAAGCGTA---AATCTT------------------------------------TTCTGGAAA---CTACTCGTTGCTTCTCTTGTTATGCTTATCGGTGGGTATGCCGGTGAG---------GCT------------------GGT------TAT---------------------------------GCG------------------------------------------------------------------GATGTA------------------GGTCCAGCA---TTTTTTGTTGGAATGGCAGGATGGATTTACATCATCTATGAAATC---------------TTC------AAA---GGTGAAGCTTCCCAACTCAATGAGAAC------AGT---GGTAATGCAGCCTGT---CAG---CAA---GCT---TTC---AAA---ACCATT---CGTGCCATCGTAACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TKVSV-NL------------FWK-LLVASLVMLIGGYAGE---A------G--Y-----------A----------------------DV------GPA-FFVGMAGWIYIIYEI-----F--K-GEASQLNEN--S-GNAAC-Q-Q-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-HF10_49E08]_KJ928561 [I-Planctomycetes-HF10_49E08] PRGD_OTU041b_f959cf811d9ccdd8f47fdb517f2dd324 gb|KJ928561| PRGD_OTU041b_f959cf811d9ccdd8f47fdb517f2dd324, putative proteorhodopsin gene, partial cds. PRGD_OTU041b_f959cf811d9ccdd8f47fdb517f2dd324, putative proteorhodopsin gene, partial cds. KJ928561 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/HF10_49E08-like subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster HF10_49E08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-14.48, 113.45; -33.28, 45.35) TTGATTACCGTGCCTCTGCAAATAGTGGAGTTCTACCTGATTCTCGCAGCTGTCACCAAGGTAAGCGTAAATCTTTTCTGGAAATTACTCGTTGCTTCTCTTGTCATGCTCATCGGCGGGTATGCCGGTGAGGCTGGCTATGCGGATGTAGGTCCAGCATTTTTTGTAGGAATGGCCGGATGGATTTACATCATCTATGAAATCTTCAAAGGTGAAGCTTCCCAACTCAATGAGAACAGTGGTAATGCAGCCTGTCAGCAAGCTTTCAAAACCATTCGTGCCATCGTAACCTTC LITVPLQIVEFYLILAAVTKVSVNLFWKLLVASLVMLIGGYAGEAGYADVGPAFFVGMAGWIYIIYEIFKGEASQLNENSGNAACQQAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACCGTGCCTCTGCAAATAGTGGAGTTCTACCTGATTCTCGCAGCT---------GTC---ACCAAGGTAAGCGTA---AATCTT------------------------------------TTCTGGAAA---TTACTCGTTGCTTCTCTTGTCATGCTCATCGGCGGGTATGCCGGTGAG---------GCT------------------GGC------TAT---------------------------------GCG------------------------------------------------------------------GATGTA------------------GGTCCAGCA---TTTTTTGTAGGAATGGCCGGATGGATTTACATCATCTATGAAATC---------------TTC------AAA---GGTGAAGCTTCCCAACTCAATGAGAAC------AGT---GGTAATGCAGCCTGT---CAG---CAA---GCT---TTC---AAA---ACCATT---CGTGCCATCGTAACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TKVSV-NL------------FWK-LLVASLVMLIGGYAGE---A------G--Y-----------A----------------------DV------GPA-FFVGMAGWIYIIYEI-----F--K-GEASQLNEN--S-GNAAC-Q-Q-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-HF10_49E08]_KJ928557 [I-Planctomycetes-HF10_49E08] PRGD_OTU041b_5db8fa9f20f561b706064457041a35f0 gb|KJ928557| PRGD_OTU041b_5db8fa9f20f561b706064457041a35f0, putative proteorhodopsin gene, partial cds. PRGD_OTU041b_5db8fa9f20f561b706064457041a35f0, putative proteorhodopsin gene, partial cds. KJ928557 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/HF10_49E08-like subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster HF10_49E08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTGCCATTACAAATTGTTGAGTTCTATTTGATTCTCGCCGCAGTAACTAAAGTCAGTGCAAATTTGTTTTGGAAATTACTCATTGCTTCACTCGTGATGTTAGTTGGTGGCTATGCCGGTGAGGTTGGTTACGCAGATGTAGGACCCGCATTCTTTGTCGGAATGGCTGGATGGTTATACATCATCTATGAAATTTTTAAAGGGGAAGCATCTCAAATTAATGAAAACAGTGGTAACCCTGCTTCTCAACAGGCTTTCAAAACAATTCGTGCAATTGTTACTTTC LITVPLQIVEFYLILAAVTKVSANLFWKLLIASLVMLVGGYAGEVGYADVGPAFFVGMAGWLYIIYEIFKGEASQINENSGNPASQQAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTACAAATTGTTGAGTTCTATTTGATTCTCGCCGCA---------GTA---ACTAAAGTCAGTGCA---AATTTG------------------------------------TTTTGGAAA---TTACTCATTGCTTCACTCGTGATGTTAGTTGGTGGCTATGCCGGTGAG---------GTT------------------GGT------TAC---------------------------------GCA------------------------------------------------------------------GATGTA------------------GGACCCGCA---TTCTTTGTCGGAATGGCTGGATGGTTATACATCATCTATGAAATT---------------TTT------AAA---GGGGAAGCATCTCAAATTAATGAAAAC------AGT---GGTAACCCTGCTTCT---CAA---CAG---GCT---TTC---AAA---ACAATT---CGTGCAATTGTTACTTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TKVSA-NL------------FWK-LLIASLVMLVGGYAGE---V------G--Y-----------A----------------------DV------GPA-FFVGMAGWLYIIYEI-----F--K-GEASQINEN--S-GNPAS-Q-Q-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-HF10_49E08]_KJ928560 [I-Planctomycetes-HF10_49E08] PRGD_OTU041b_d7dd36dc62dcdd41a7d957b099507816 gb|KJ928560| PRGD_OTU041b_d7dd36dc62dcdd41a7d957b099507816, putative proteorhodopsin gene, partial cds. PRGD_OTU041b_d7dd36dc62dcdd41a7d957b099507816, putative proteorhodopsin gene, partial cds. KJ928560 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/HF10_49E08-like subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster HF10_49E08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) TTAATTACAGTGCCATTACAAATTGTTGAGTTCTACCTGATCCTCGCCGCAGTAACTAAAGTCAGTGCAAATTTGTTTTGGAAATTACTCATTGCTTCACTCGTGATGTTAGTTGGTGGCTATGCCGGTGAGGTTGGTTACGCAGATGTAGGACCCGCATTCTTTGTCGGAATGGCTGGATGGTTATACATCATCTATGAAATTTTTAAAGGGGAAGCATCTCAAATTAATGAAAACAGTGGTAACCCTGCTTCTCAACAGGCTTTCAAAACAATTCGTGCAATTGTTACTTTC LITVPLQIVEFYLILAAVTKVSANLFWKLLIASLVMLVGGYAGEVGYADVGPAFFVGMAGWLYIIYEIFKGEASQINENSGNPASQQAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTACAAATTGTTGAGTTCTACCTGATCCTCGCCGCA---------GTA---ACTAAAGTCAGTGCA---AATTTG------------------------------------TTTTGGAAA---TTACTCATTGCTTCACTCGTGATGTTAGTTGGTGGCTATGCCGGTGAG---------GTT------------------GGT------TAC---------------------------------GCA------------------------------------------------------------------GATGTA------------------GGACCCGCA---TTCTTTGTCGGAATGGCTGGATGGTTATACATCATCTATGAAATT---------------TTT------AAA---GGGGAAGCATCTCAAATTAATGAAAAC------AGT---GGTAACCCTGCTTCT---CAA---CAG---GCT---TTC---AAA---ACAATT---CGTGCAATTGTTACTTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TKVSA-NL------------FWK-LLIASLVMLVGGYAGE---V------G--Y-----------A----------------------DV------GPA-FFVGMAGWLYIIYEI-----F--K-GEASQINEN--S-GNPAS-Q-Q-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-HF10_49E08]_KJ928550 [I-Planctomycetes-HF10_49E08] PRGD_OTU041b_otuREP_2bdc4fd34ddc945038ac1c4c6679aca4 gb|KJ928550| PRGD_OTU041b_otuREP_2bdc4fd34ddc945038ac1c4c6679aca4, putative proteorhodopsin gene, partial cds. PRGD_OTU041b_otuREP_2bdc4fd34ddc945038ac1c4c6679aca4, putative proteorhodopsin gene, partial cds. KJ928550 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/HF10_49E08-like subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster HF10_49E08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) TTAATTACTGTGCCTTTGCAAATTGTGGAATTTTACTTGATTCTTGCAGCTGTAACCAAGGTAAGTGCCAATCTTTTCTGGAAACTACTGATTGCCTCTCTTGTCATGTTGGTTGGTGGATATGCTGGTGAAGCTGGTTATGCAGATGTAGGACCCGCATTCTTCGTAGGAATGGCCGGCTGGGTATACATCATCTATGAAATTTTCAAAGGGGAAGCATCGCAAATCAATGAGAATAGTGGAAACGCTGCTTCTCAGCAGGCTTTCAAAACCATTCGTGCAATTGTAACTTTT LITVPLQIVEFYLILAAVTKVSANLFWKLLIASLVMLVGGYAGEAGYADVGPAFFVGMAGWVYIIYEIFKGEASQINENSGNAASQQAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTGCCTTTGCAAATTGTGGAATTTTACTTGATTCTTGCAGCT---------GTA---ACCAAGGTAAGTGCC---AATCTT------------------------------------TTCTGGAAA---CTACTGATTGCCTCTCTTGTCATGTTGGTTGGTGGATATGCTGGTGAA---------GCT------------------GGT------TAT---------------------------------GCA------------------------------------------------------------------GATGTA------------------GGACCCGCA---TTCTTCGTAGGAATGGCCGGCTGGGTATACATCATCTATGAAATT---------------TTC------AAA---GGGGAAGCATCGCAAATCAATGAGAAT------AGT---GGAAACGCTGCTTCT---CAG---CAG---GCT---TTC---AAA---ACCATT---CGTGCAATTGTAACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TKVSA-NL------------FWK-LLIASLVMLVGGYAGE---A------G--Y-----------A----------------------DV------GPA-FFVGMAGWVYIIYEI-----F--K-GEASQINEN--S-GNAAS-Q-Q-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-HF10_49E08]_KJ928551 [I-Planctomycetes-HF10_49E08] PRGD_OTU041b_0e3ac474d99aad4f834776316d0ebed8 gb|KJ928551| PRGD_OTU041b_0e3ac474d99aad4f834776316d0ebed8, putative proteorhodopsin gene, partial cds. PRGD_OTU041b_0e3ac474d99aad4f834776316d0ebed8, putative proteorhodopsin gene, partial cds. KJ928551 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/HF10_49E08-like subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster HF10_49E08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACTGTACCTTTACAAATCGTTGAGTTTTATCTCATTCTCGCAGCTGTTACCAAAGTGAGTGCAAACTTGTTTTGGAAATTACTCATTGCATCTTTGGTGATGCTCATAGGCGGTTATGCCGGGGAAGCTGGTTACGCTGATGTGGGACCTGCTTTCTTTGTTGGTATGGCAGGTTGGTTGTACATCATTTATGAACTCTTCAAGGGTGAAGCTTCACAGCTTAATGAAAACAGTGGTAATGCCGCATGTCAGCAAGCTTTCAAGACTATCCGAGCTATCGTAACTTTC LITVPLQIVEFYLILAAVTKVSANLFWKLLIASLVMLIGGYAGEAGYADVGPAFFVGMAGWLYIIYELFKGEASQLNENSGNAACQQAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCTTTACAAATCGTTGAGTTTTATCTCATTCTCGCAGCT---------GTT---ACCAAAGTGAGTGCA---AACTTG------------------------------------TTTTGGAAA---TTACTCATTGCATCTTTGGTGATGCTCATAGGCGGTTATGCCGGGGAA---------GCT------------------GGT------TAC---------------------------------GCT------------------------------------------------------------------GATGTG------------------GGACCTGCT---TTCTTTGTTGGTATGGCAGGTTGGTTGTACATCATTTATGAACTC---------------TTC------AAG---GGTGAAGCTTCACAGCTTAATGAAAAC------AGT---GGTAATGCCGCATGT---CAG---CAA---GCT---TTC---AAG---ACTATC---CGAGCTATCGTAACTTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TKVSA-NL------------FWK-LLIASLVMLIGGYAGE---A------G--Y-----------A----------------------DV------GPA-FFVGMAGWLYIIYEL-----F--K-GEASQLNEN--S-GNAAC-Q-Q-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-HF10_49E08]_KJ928552 [I-Planctomycetes-HF10_49E08] PRGD_OTU041b_0f983d07ee6be70e4ebf592e427a4e94 gb|KJ928552| PRGD_OTU041b_0f983d07ee6be70e4ebf592e427a4e94, putative proteorhodopsin gene, partial cds. PRGD_OTU041b_0f983d07ee6be70e4ebf592e427a4e94, putative proteorhodopsin gene, partial cds. KJ928552 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/HF10_49E08-like subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster HF10_49E08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) TTAATTACTGTACCTTTACAAATCGTTGAATTTTATCTCATTCTCGCAGCTGTTACCAAAGTGAGTGCAAACTTGTTTTGGAAATTACTCATTGCATCTTTGGTGATGCTCATAGGCGGTTATGCCGGGGAAGCTGGTTACGCTGATGTGGGACCTGCTTTCTTAGTTGGTATGGCCGGTTGGTTGTACATCATTTATGAACTCTTCAAGGGTGAAGCTTCCCAGCTTAATGAAAACAGTGGTAATGCCGCATGTCAGCAAGCTTTCAAGACTATCCGAGCTATCGTAACTTTC LITVPLQIVEFYLILAAVTKVSANLFWKLLIASLVMLIGGYAGEAGYADVGPAFLVGMAGWLYIIYELFKGEASQLNENSGNAACQQAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCTTTACAAATCGTTGAATTTTATCTCATTCTCGCAGCT---------GTT---ACCAAAGTGAGTGCA---AACTTG------------------------------------TTTTGGAAA---TTACTCATTGCATCTTTGGTGATGCTCATAGGCGGTTATGCCGGGGAA---------GCT------------------GGT------TAC---------------------------------GCT------------------------------------------------------------------GATGTG------------------GGACCTGCT---TTCTTAGTTGGTATGGCCGGTTGGTTGTACATCATTTATGAACTC---------------TTC------AAG---GGTGAAGCTTCCCAGCTTAATGAAAAC------AGT---GGTAATGCCGCATGT---CAG---CAA---GCT---TTC---AAG---ACTATC---CGAGCTATCGTAACTTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TKVSA-NL------------FWK-LLIASLVMLIGGYAGE---A------G--Y-----------A----------------------DV------GPA-FLVGMAGWLYIIYEL-----F--K-GEASQLNEN--S-GNAAC-Q-Q-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-HF10_49E08]_KJ928562 [I-Planctomycetes-HF10_49E08] PRGD_OTU041b_fdfa39c3b88b7dfdab356449e40d8426 gb|KJ928562| PRGD_OTU041b_fdfa39c3b88b7dfdab356449e40d8426, putative proteorhodopsin gene, partial cds. PRGD_OTU041b_fdfa39c3b88b7dfdab356449e40d8426, putative proteorhodopsin gene, partial cds. KJ928562 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/HF10_49E08-like subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster HF10_49E08-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175) TTAATTACTGTACCTTTACAAATCGTTGAGTTTTATCTCATTCTCGCAGCTGTTACCAAAGTGAGTGCAAACTTGTTTTGGAAATTACTCATTGCTTCTTTGGTGATGCTCATAGGCGGTTATGCTGGGGAAGCTGGTTATGCTGATGTGGGACCTGCTTTCTTTGTTGGTATGGCCGGTTGGTTGTACATCATTTATGAACTCTTCAAGGGTGAAGCTTCACAGCTTAATGAAAACAGTGGTAATGCCGCATGTCAGCAAGCTTTCAAGACTATCCGAGCTATCGTAACTTTC LITVPLQIVEFYLILAAVTKVSANLFWKLLIASLVMLIGGYAGEAGYADVGPAFFVGMAGWLYIIYELFKGEASQLNENSGNAACQQAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCTTTACAAATCGTTGAGTTTTATCTCATTCTCGCAGCT---------GTT---ACCAAAGTGAGTGCA---AACTTG------------------------------------TTTTGGAAA---TTACTCATTGCTTCTTTGGTGATGCTCATAGGCGGTTATGCTGGGGAA---------GCT------------------GGT------TAT---------------------------------GCT------------------------------------------------------------------GATGTG------------------GGACCTGCT---TTCTTTGTTGGTATGGCCGGTTGGTTGTACATCATTTATGAACTC---------------TTC------AAG---GGTGAAGCTTCACAGCTTAATGAAAAC------AGT---GGTAATGCCGCATGT---CAG---CAA---GCT---TTC---AAG---ACTATC---CGAGCTATCGTAACTTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TKVSA-NL------------FWK-LLIASLVMLIGGYAGE---A------G--Y-----------A----------------------DV------GPA-FFVGMAGWLYIIYEL-----F--K-GEASQLNEN--S-GNAAC-Q-Q-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes]_KJ929511 [I-Planctomycetes] PRGD_OTU141a_4792d474cfcadecdce611d90ba1ee5fa gb|KJ929511| PRGD_OTU141a_4792d474cfcadecdce611d90ba1ee5fa, putative proteorhodopsin gene, partial cds. PRGD_OTU141a_4792d474cfcadecdce611d90ba1ee5fa, putative proteorhodopsin gene, partial cds. KJ929511 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATAACGGTGCCTCTTCAGATTGTGGAGTTTTATCTGATTCTTGCTGCGGTTACAACCGTGAGCGGTAAACTTTTCTGGAGGCTTTTGACTGCTTCCATTGTTATGCTTGTGGGAGGATACCTCGGAGAGACTGGACAAATGGAGGTAATGCCTGCGTTCATTATCGGAATGGCTGGATGGGTATATATCATCTGGGAAATTTTCAAGGGAGAAGCCTCACAAATTAACGAATCCAGTGGAAATGCTGCTTCTCAGCAAGCCTTTAAGACAATCCGGGCGATTGTTACTTTT LITVPLQIVEFYLILAAVTTVSGKLFWRLLTASIVMLVGGYLGETGQMEVMPAFIIGMAGWVYIIWEIFKGEASQINESSGNAASQQAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACGGTGCCTCTTCAGATTGTGGAGTTTTATCTGATTCTTGCTGCG---------GTT---ACAACCGTGAGCGGT---AAACTT------------------------------------TTCTGGAGG---CTTTTGACTGCTTCCATTGTTATGCTTGTGGGAGGATACCTCGGAGAG---------ACT------------------GGA------CAA---------------------------------ATG------------------------------------------------------------------GAGGTA------------------ATGCCTGCG---TTCATTATCGGAATGGCTGGATGGGTATATATCATCTGGGAAATT---------------TTC------AAG---GGAGAAGCCTCACAAATTAACGAATCC------AGT---GGAAATGCTGCTTCT---CAG---CAA---GCC---TTT---AAG---ACAATC---CGGGCGATTGTTACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TTVSG-KL------------FWR-LLTASIVMLVGGYLGE---T------G--Q-----------M----------------------EV------MPA-FIIGMAGWVYIIWEI-----F--K-GEASQINES--S-GNAAS-Q-Q-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes]_KJ929510 [I-Planctomycetes] PRGD_OTU141a_otuREP_f4d030f862ca141f457d6b39e5deea86 gb|KJ929510| PRGD_OTU141a_otuREP_f4d030f862ca141f457d6b39e5deea86, putative proteorhodopsin gene, partial cds. PRGD_OTU141a_otuREP_f4d030f862ca141f457d6b39e5deea86, putative proteorhodopsin gene, partial cds. KJ929510 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175) TTGATAACGGTGCCTCTTCAGATTGTGGAGTTTTATCTGATTCTTGCTGCGGTTACAACCGTGAGCGGTAAACTTTTCTGGAGGCTTTTGACTGCTTCCATTGTTATGCTTGTGGGAGGATACCTCGGAGAGACTGGACAAATGGAGGTAATGCCTGCGTTCATTATCGGAATGGCTGGATGGGTATATATCATCTGGGAAATTTTCAAGGGAGAAGCCTCACAAATTAACGAAGCCAGCGGAAATGCTGCTTCTCAGCAAGCCTTTAAGACAATCCGGGCGATTGTTACTTTT LITVPLQIVEFYLILAAVTTVSGKLFWRLLTASIVMLVGGYLGETGQMEVMPAFIIGMAGWVYIIWEIFKGEASQINEASGNAASQQAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACGGTGCCTCTTCAGATTGTGGAGTTTTATCTGATTCTTGCTGCG---------GTT---ACAACCGTGAGCGGT---AAACTT------------------------------------TTCTGGAGG---CTTTTGACTGCTTCCATTGTTATGCTTGTGGGAGGATACCTCGGAGAG---------ACT------------------GGA------CAA---------------------------------ATG------------------------------------------------------------------GAGGTA------------------ATGCCTGCG---TTCATTATCGGAATGGCTGGATGGGTATATATCATCTGGGAAATT---------------TTC------AAG---GGAGAAGCCTCACAAATTAACGAAGCC------AGC---GGAAATGCTGCTTCT---CAG---CAA---GCC---TTT---AAG---ACAATC---CGGGCGATTGTTACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TTVSG-KL------------FWR-LLTASIVMLVGGYLGE---T------G--Q-----------M----------------------EV------MPA-FIIGMAGWVYIIWEI-----F--K-GEASQINEA--S-GNAAS-Q-Q-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes]_KJ929512 [I-Planctomycetes] PRGD_OTU141a_7c73b452d85b474b8fdf7b4a335c3487 gb|KJ929512| PRGD_OTU141a_7c73b452d85b474b8fdf7b4a335c3487, putative proteorhodopsin gene, partial cds. PRGD_OTU141a_7c73b452d85b474b8fdf7b4a335c3487, putative proteorhodopsin gene, partial cds. KJ929512 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATAACAGTGCCTCTTCAGATCGTGGAGTTTTATTTGATTCTTGCAGCGGTTACAACTGTGAGCGGTAAACTTTTCTGGAGGCTTCTGACTGCTTCCATTGTTATGCTTGTTGGAGGATACCTCGGAGAGACTGGACAAATGGAGGTAATGCCTGCGTTCATTATCGGAATGGCTGGATGGGTATATATCATCTGGGAAATTCTCAAAGGTGAAGCTTCACAAATTAATGAGTCCAGTGGAAATGCTGCTTCTCAGCAAGCCTTCAAGACAATTCGGGCGATTGTTACTTTT LITVPLQIVEFYLILAAVTTVSGKLFWRLLTASIVMLVGGYLGETGQMEVMPAFIIGMAGWVYIIWEILKGEASQINESSGNAASQQAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACAGTGCCTCTTCAGATCGTGGAGTTTTATTTGATTCTTGCAGCG---------GTT---ACAACTGTGAGCGGT---AAACTT------------------------------------TTCTGGAGG---CTTCTGACTGCTTCCATTGTTATGCTTGTTGGAGGATACCTCGGAGAG---------ACT------------------GGA------CAA---------------------------------ATG------------------------------------------------------------------GAGGTA------------------ATGCCTGCG---TTCATTATCGGAATGGCTGGATGGGTATATATCATCTGGGAAATT---------------CTC------AAA---GGTGAAGCTTCACAAATTAATGAGTCC------AGT---GGAAATGCTGCTTCT---CAG---CAA---GCC---TTC---AAG---ACAATT---CGGGCGATTGTTACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TTVSG-KL------------FWR-LLTASIVMLVGGYLGE---T------G--Q-----------M----------------------EV------MPA-FIIGMAGWVYIIWEI-----L--K-GEASQINES--S-GNAAS-Q-Q-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-a]_KJ929513 [I-Planctomycetes-a] PRGD_OTU141b_otuREP_d6a2c9d27632232933bcae5d8ea31cac gb|KJ929513| PRGD_OTU141b_otuREP_d6a2c9d27632232933bcae5d8ea31cac, putative proteorhodopsin gene, partial cds. PRGD_OTU141b_otuREP_d6a2c9d27632232933bcae5d8ea31cac, putative proteorhodopsin gene, partial cds. KJ929513 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/A subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185), English Channel (48.7717, -3.9683) TTGATAACAGTTCCTCTTCAAATAGTTGAGTTTTACTTAATCCTTGCTGCGGTTACTACAGTAAGACCTCAACTTTTTTGGCGTTTACTTATTGCTTCTCTAGTCATGCTTATTGGTGGGTATGCTGGTGAGACTGGACAAATGGGTGTAATGCCTGCATTCGTGATCGGAATGGCTGGTTGGATTTATATCATCTGGGAAATTTTCAAAGGTGAAGCTTCTAAAATTAATGACTCAAGTGGAAATGCGGCGAGTCAACAAGCCTTCAAGACAATCAGAGCGATTGTCACTTTC LITVPLQIVEFYLILAAVTTVRPQLFWRLLIASLVMLIGGYAGETGQMGVMPAFVIGMAGWIYIIWEIFKGEASKINDSSGNAASQQAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACAGTTCCTCTTCAAATAGTTGAGTTTTACTTAATCCTTGCTGCG---------GTT---ACTACAGTAAGACCT---CAACTT------------------------------------TTTTGGCGT---TTACTTATTGCTTCTCTAGTCATGCTTATTGGTGGGTATGCTGGTGAG---------ACT------------------GGA------CAA---------------------------------ATG------------------------------------------------------------------GGTGTA------------------ATGCCTGCA---TTCGTGATCGGAATGGCTGGTTGGATTTATATCATCTGGGAAATT---------------TTC------AAA---GGTGAAGCTTCTAAAATTAATGACTCA------AGT---GGAAATGCGGCGAGT---CAA---CAA---GCC---TTC---AAG---ACAATC---AGAGCGATTGTCACTTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TTVRP-QL------------FWR-LLIASLVMLIGGYAGE---T------G--Q-----------M----------------------GV------MPA-FVIGMAGWIYIIWEI-----F--K-GEASKINDS--S-GNAAS-Q-Q-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-a]_KJ928575 [I-Planctomycetes-a] PRGD_OTU042_26726a68817750c858368564bbb5f3a8 gb|KJ928575| PRGD_OTU042_26726a68817750c858368564bbb5f3a8, putative proteorhodopsin gene, partial cds. PRGD_OTU042_26726a68817750c858368564bbb5f3a8, putative proteorhodopsin gene, partial cds. KJ928575 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/A subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175) CTCATTACAGTCCCTTTGCAAATTGTTGAATTCTATCTCATACTTGCTGCAGTGACTAAAGTGAGTGCCAATGTATTTTGGAAGTTACTGATTGGATCACTGGTCATGCTCATCGGAGGATATGTAGGTGAAACAAATGAAGTGTACAAGACTTCAGGATTTGTCGTAGGTATGATAGGGTGGGTGTATATAATCTGGGAAATTTTCAAGGGCGAAGCTTCCCAACTCAATGAAAACAGTGGAAACGCTGCCTGCCAACAAGCCTTTAAAACTATTCGTTTGATTGTAACTTTT LITVPLQIVEFYLILAAVTKVSANVFWKLLIGSLVMLIGGYVGETNEVYKTSGFVVGMIGWVYIIWEIFKGEASQLNENSGNAACQQAFKTIRLIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATTACAGTCCCTTTGCAAATTGTTGAATTCTATCTCATACTTGCTGCA---------GTG---ACTAAAGTGAGTGCC---AATGTA------------------------------------TTTTGGAAG---TTACTGATTGGATCACTGGTCATGCTCATCGGAGGATATGTAGGTGAA---------ACA------------------AAT------GAA---------------------------------GTG------------------------------------------------------------------TACAAG------------------ACTTCAGGA---TTTGTCGTAGGTATGATAGGGTGGGTGTATATAATCTGGGAAATT---------------TTC------AAG---GGCGAAGCTTCCCAACTCAATGAAAAC------AGT---GGAAACGCTGCCTGC---CAA---CAA---GCC---TTT---AAA---ACTATT---CGTTTGATTGTAACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TKVSA-NV------------FWK-LLIGSLVMLIGGYVGE---T------N--E-----------V----------------------YK------TSG-FVVGMIGWVYIIWEI-----F--K-GEASQLNEN--S-GNAAC-Q-Q-A-F-K-TI-RLIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-a]_KJ928577 [I-Planctomycetes-a] PRGD_OTU042_2d93d27458f2a040d47fef9c77e4a369 gb|KJ928577| PRGD_OTU042_2d93d27458f2a040d47fef9c77e4a369, putative proteorhodopsin gene, partial cds. PRGD_OTU042_2d93d27458f2a040d47fef9c77e4a369, putative proteorhodopsin gene, partial cds. KJ928577 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/A subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097) CTCATTACAGTCCCTTTGCAAATTGTTGAATTCTATCTCATACTTGCTGCAGTGACTAAAGTGAGTGCCAATGTATTTTGGAAGTTACTAATTGGATCACTGGTCATGCTCATCGGAGGATATGTAGGTGAAACAAATGAAGTATACAAGACTTCAGGATTTGTCGTAGGTATGATTGGGTGGGTGTATATAATCTGGGAAATTTTCAAGGGCGAAGCCTCTAAACTAAATGACAACAGTGGAAACGCTGCCTGCCAACAAGCCTTTAAAACAATTCGTTTGATTGTAACTTTT LITVPLQIVEFYLILAAVTKVSANVFWKLLIGSLVMLIGGYVGETNEVYKTSGFVVGMIGWVYIIWEIFKGEASKLNDNSGNAACQQAFKTIRLIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATTACAGTCCCTTTGCAAATTGTTGAATTCTATCTCATACTTGCTGCA---------GTG---ACTAAAGTGAGTGCC---AATGTA------------------------------------TTTTGGAAG---TTACTAATTGGATCACTGGTCATGCTCATCGGAGGATATGTAGGTGAA---------ACA------------------AAT------GAA---------------------------------GTA------------------------------------------------------------------TACAAG------------------ACTTCAGGA---TTTGTCGTAGGTATGATTGGGTGGGTGTATATAATCTGGGAAATT---------------TTC------AAG---GGCGAAGCCTCTAAACTAAATGACAAC------AGT---GGAAACGCTGCCTGC---CAA---CAA---GCC---TTT---AAA---ACAATT---CGTTTGATTGTAACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TKVSA-NV------------FWK-LLIGSLVMLIGGYVGE---T------N--E-----------V----------------------YK------TSG-FVVGMIGWVYIIWEI-----F--K-GEASKLNDN--S-GNAAC-Q-Q-A-F-K-TI-RLIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-a]_KJ928592 [I-Planctomycetes-a] PRGD_OTU042_d421d60845dc3110c5e3f958c02d3b8c gb|KJ928592| PRGD_OTU042_d421d60845dc3110c5e3f958c02d3b8c, putative proteorhodopsin gene, partial cds. PRGD_OTU042_d421d60845dc3110c5e3f958c02d3b8c, putative proteorhodopsin gene, partial cds. KJ928592 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/A subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175) CTCATTACAGTCCCTTTGCAAATTGTTGAATTCTATCTTATACTTGCTGCAGTGACTAAAGTTAATGCCAATGTATTTTGGAAGCTACTAATTGGATCACTTGTCATGCTCATCGGAGGATATGTAGGTGAAACAAATGAAGTGTACAAGACTTCAGGATTTGTCGTAGGTATGATCGGATGGGTGTATATAATCTGGGAAATTTTCAAGGGCGAAGCTTCCCAACTCAATGAAAACAGTGGAAATGCTGCCTGCCAACAAGCTTTTAAAACTATTCGTTTGATTGTGACATTT LITVPLQIVEFYLILAAVTKVNANVFWKLLIGSLVMLIGGYVGETNEVYKTSGFVVGMIGWVYIIWEIFKGEASQLNENSGNAACQQAFKTIRLIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATTACAGTCCCTTTGCAAATTGTTGAATTCTATCTTATACTTGCTGCA---------GTG---ACTAAAGTTAATGCC---AATGTA------------------------------------TTTTGGAAG---CTACTAATTGGATCACTTGTCATGCTCATCGGAGGATATGTAGGTGAA---------ACA------------------AAT------GAA---------------------------------GTG------------------------------------------------------------------TACAAG------------------ACTTCAGGA---TTTGTCGTAGGTATGATCGGATGGGTGTATATAATCTGGGAAATT---------------TTC------AAG---GGCGAAGCTTCCCAACTCAATGAAAAC------AGT---GGAAATGCTGCCTGC---CAA---CAA---GCT---TTT---AAA---ACTATT---CGTTTGATTGTGACATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TKVNA-NV------------FWK-LLIGSLVMLIGGYVGE---T------N--E-----------V----------------------YK------TSG-FVVGMIGWVYIIWEI-----F--K-GEASQLNEN--S-GNAAC-Q-Q-A-F-K-TI-RLIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-a]_KJ928583 [I-Planctomycetes-a] PRGD_OTU042_7ba6d4aa803eee1b90a3b2b9b5bf4a9e gb|KJ928583| PRGD_OTU042_7ba6d4aa803eee1b90a3b2b9b5bf4a9e, putative proteorhodopsin gene, partial cds. PRGD_OTU042_7ba6d4aa803eee1b90a3b2b9b5bf4a9e, putative proteorhodopsin gene, partial cds. KJ928583 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/A subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45; -33.28, 45.35) CTCATTACAGTCCCTTTGCAAATTGTTGAATTCTATCTCATACTTGCTGCAGTGACTAAAGTTAATGCCAATGTATTTTGGAAGCTACTAATTGGATCACTGGTCATGCTCATCGGAGGATATGTAGGTGAAACAAATGAAGTGTACAAGACTTCAGGATTTGTCGTAGGTATGATCGGATGGGTGTATATAATCTGGGAAATTTTCAAGGGCGAAGCTTCCCAACTCAATGAAAACAGTGGAAATGCGGCCTGCCAACAAGCTTTTAAAACTATTCGTTTGATTGTGACATTT LITVPLQIVEFYLILAAVTKVNANVFWKLLIGSLVMLIGGYVGETNEVYKTSGFVVGMIGWVYIIWEIFKGEASQLNENSGNAACQQAFKTIRLIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATTACAGTCCCTTTGCAAATTGTTGAATTCTATCTCATACTTGCTGCA---------GTG---ACTAAAGTTAATGCC---AATGTA------------------------------------TTTTGGAAG---CTACTAATTGGATCACTGGTCATGCTCATCGGAGGATATGTAGGTGAA---------ACA------------------AAT------GAA---------------------------------GTG------------------------------------------------------------------TACAAG------------------ACTTCAGGA---TTTGTCGTAGGTATGATCGGATGGGTGTATATAATCTGGGAAATT---------------TTC------AAG---GGCGAAGCTTCCCAACTCAATGAAAAC------AGT---GGAAATGCGGCCTGC---CAA---CAA---GCT---TTT---AAA---ACTATT---CGTTTGATTGTGACATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TKVNA-NV------------FWK-LLIGSLVMLIGGYVGE---T------N--E-----------V----------------------YK------TSG-FVVGMIGWVYIIWEI-----F--K-GEASQLNEN--S-GNAAC-Q-Q-A-F-K-TI-RLIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-a]_KJ928584 [I-Planctomycetes-a] PRGD_OTU042_7bf0a722899501a525b20dae968dc881 gb|KJ928584| PRGD_OTU042_7bf0a722899501a525b20dae968dc881, putative proteorhodopsin gene, partial cds. PRGD_OTU042_7bf0a722899501a525b20dae968dc881, putative proteorhodopsin gene, partial cds. KJ928584 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/A subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTCATTACAGTCCCTTTGCAAATTGTTGAATTCTATCTTATACTTGCTGCAGTGACTAAAGTTAATGCCAATGTATTTTGGAAGCTACTAATTGGATCACTGGTCATGCTCATCGGAGGATATGTAGGTGAAACAAATGAAGTATACAAGACTTCAGGATTTGTCGTAGGTATGATTGGATGGTTGTATATAATCTGGGAAATTTTCAAGGGCGAAGCTTCCCAACTCAATGAAAACAGTGGAAATGCTGCCTGCCAACAAGCCTTTAAAACTATTCGTTTGATTGTAACTTTT LITVPLQIVEFYLILAAVTKVNANVFWKLLIGSLVMLIGGYVGETNEVYKTSGFVVGMIGWLYIIWEIFKGEASQLNENSGNAACQQAFKTIRLIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATTACAGTCCCTTTGCAAATTGTTGAATTCTATCTTATACTTGCTGCA---------GTG---ACTAAAGTTAATGCC---AATGTA------------------------------------TTTTGGAAG---CTACTAATTGGATCACTGGTCATGCTCATCGGAGGATATGTAGGTGAA---------ACA------------------AAT------GAA---------------------------------GTA------------------------------------------------------------------TACAAG------------------ACTTCAGGA---TTTGTCGTAGGTATGATTGGATGGTTGTATATAATCTGGGAAATT---------------TTC------AAG---GGCGAAGCTTCCCAACTCAATGAAAAC------AGT---GGAAATGCTGCCTGC---CAA---CAA---GCC---TTT---AAA---ACTATT---CGTTTGATTGTAACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TKVNA-NV------------FWK-LLIGSLVMLIGGYVGE---T------N--E-----------V----------------------YK------TSG-FVVGMIGWLYIIWEI-----F--K-GEASQLNEN--S-GNAAC-Q-Q-A-F-K-TI-RLIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-a]_KJ928579 [I-Planctomycetes-a] PRGD_OTU042_40e3cf2f89be0e52e840f470019f8bc0 gb|KJ928579| PRGD_OTU042_40e3cf2f89be0e52e840f470019f8bc0, putative proteorhodopsin gene, partial cds. PRGD_OTU042_40e3cf2f89be0e52e840f470019f8bc0, putative proteorhodopsin gene, partial cds. KJ928579 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/A subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-35.05, 23.73) CTCATCACAGTACCCTTACAGATCGTTGAATTCTATCTCATACTTGCTGCAGTGACAAAAGTGAATGCCAATGTATTTTGGAAGTTATTAATTGGATCACTGGTTATGCTCATAGGGGGGTATGTTGGTGAAACAAATGAATTATACAAGACTTCAGGATTTGTAGTAGGTATGATTGGGTGGTTGTATATAATTTGGGAAATCTTCAAGGGCGAAGCTTCTCAGCTCAATGAAAACAGTGGAAATGCTGCCTGCCAACAAGCCTTTAAGACTATTCGTCTGATTGTAACTTTT LITVPLQIVEFYLILAAVTKVNANVFWKLLIGSLVMLIGGYVGETNELYKTSGFVVGMIGWLYIIWEIFKGEASQLNENSGNAACQQAFKTIRLIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTACCCTTACAGATCGTTGAATTCTATCTCATACTTGCTGCA---------GTG---ACAAAAGTGAATGCC---AATGTA------------------------------------TTTTGGAAG---TTATTAATTGGATCACTGGTTATGCTCATAGGGGGGTATGTTGGTGAA---------ACA------------------AAT------GAA---------------------------------TTA------------------------------------------------------------------TACAAG------------------ACTTCAGGA---TTTGTAGTAGGTATGATTGGGTGGTTGTATATAATTTGGGAAATC---------------TTC------AAG---GGCGAAGCTTCTCAGCTCAATGAAAAC------AGT---GGAAATGCTGCCTGC---CAA---CAA---GCC---TTT---AAG---ACTATT---CGTCTGATTGTAACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TKVNA-NV------------FWK-LLIGSLVMLIGGYVGE---T------N--E-----------L----------------------YK------TSG-FVVGMIGWLYIIWEI-----F--K-GEASQLNEN--S-GNAAC-Q-Q-A-F-K-TI-RLIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-a]_KJ928581 [I-Planctomycetes-a] PRGD_OTU042_46548efa7d6bb0ee1d4dcf8cb9069642 gb|KJ928581| PRGD_OTU042_46548efa7d6bb0ee1d4dcf8cb9069642, putative proteorhodopsin gene, partial cds. PRGD_OTU042_46548efa7d6bb0ee1d4dcf8cb9069642, putative proteorhodopsin gene, partial cds. KJ928581 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/A subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) CTCATCACAGTACCCTTACAGATCGTTGAATTCTATCTCATACTTGCTGCAGTGACAAAAGTGAATGCCAATGTATTTTGGAAGTTATTAATTGGATCACTGGTCATGCTCATCGGGGGATATGTTGGTGAAACAAATGAATTATACAAGACTTCAGGATTTGTAGTAGGTATGATTGGGTGGTTGTATATAATTTGGGAAATCTTCAAGGGCGAAGCTTCTCAACTCAATGAAAACAGTGGAAATGCTGCCTGCCAACAAGCCTTTAAGACTATTCGTCTGATTGTAACTTTT LITVPLQIVEFYLILAAVTKVNANVFWKLLIGSLVMLIGGYVGETNELYKTSGFVVGMIGWLYIIWEIFKGEASQLNENSGNAACQQAFKTIRLIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACAGTACCCTTACAGATCGTTGAATTCTATCTCATACTTGCTGCA---------GTG---ACAAAAGTGAATGCC---AATGTA------------------------------------TTTTGGAAG---TTATTAATTGGATCACTGGTCATGCTCATCGGGGGATATGTTGGTGAA---------ACA------------------AAT------GAA---------------------------------TTA------------------------------------------------------------------TACAAG------------------ACTTCAGGA---TTTGTAGTAGGTATGATTGGGTGGTTGTATATAATTTGGGAAATC---------------TTC------AAG---GGCGAAGCTTCTCAACTCAATGAAAAC------AGT---GGAAATGCTGCCTGC---CAA---CAA---GCC---TTT---AAG---ACTATT---CGTCTGATTGTAACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TKVNA-NV------------FWK-LLIGSLVMLIGGYVGE---T------N--E-----------L----------------------YK------TSG-FVVGMIGWLYIIWEI-----F--K-GEASQLNEN--S-GNAAC-Q-Q-A-F-K-TI-RLIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-a]_KJ928573 [I-Planctomycetes-a] PRGD_OTU042_18cdb0c31e84ea1841f191c0fa37ce1b gb|KJ928573| PRGD_OTU042_18cdb0c31e84ea1841f191c0fa37ce1b, putative proteorhodopsin gene, partial cds. PRGD_OTU042_18cdb0c31e84ea1841f191c0fa37ce1b, putative proteorhodopsin gene, partial cds. KJ928573 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/A subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATAACGGTACCATTGCAAATTGTAGAATTCTATCTCATACTTGCAGCTGTGACAAAGGTGAACGCCAATGTATTTTGGAAGTTACTGATCGGGTCACTGGTGATGCTCATTGGGGGATATGTTGGTGAAACAAATGAGGCATATCAAACACAAGGATTTTTTGTAGGCATGATTGGGTGGTTGTACATAATTTGGGAAATTTTCAAGGGTGAAGCCTCCAAACTCAATGAAAACAGTGGAAATGCTGCCTGCCAACAAGCCTTCAAAACTATTCGACTAATTGTTACTTTT LITVPLQIVEFYLILAAVTKVNANVFWKLLIGSLVMLIGGYVGETNEAYQTQGFFVGMIGWLYIIWEIFKGEASKLNENSGNAACQQAFKTIRLIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATAACGGTACCATTGCAAATTGTAGAATTCTATCTCATACTTGCAGCT---------GTG---ACAAAGGTGAACGCC---AATGTA------------------------------------TTTTGGAAG---TTACTGATCGGGTCACTGGTGATGCTCATTGGGGGATATGTTGGTGAA---------ACA------------------AAT------GAG---------------------------------GCA------------------------------------------------------------------TATCAA------------------ACACAAGGA---TTTTTTGTAGGCATGATTGGGTGGTTGTACATAATTTGGGAAATT---------------TTC------AAG---GGTGAAGCCTCCAAACTCAATGAAAAC------AGT---GGAAATGCTGCCTGC---CAA---CAA---GCC---TTC---AAA---ACTATT---CGACTAATTGTTACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TKVNA-NV------------FWK-LLIGSLVMLIGGYVGE---T------N--E-----------A----------------------YQ------TQG-FFVGMIGWLYIIWEI-----F--K-GEASKLNEN--S-GNAAC-Q-Q-A-F-K-TI-RLIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-a]_KJ928571 [I-Planctomycetes-a] PRGD_OTU042_otuREP_5be92221647da410da4a9bec43b4e8c5 gb|KJ928571| PRGD_OTU042_otuREP_5be92221647da410da4a9bec43b4e8c5, putative proteorhodopsin gene, partial cds. PRGD_OTU042_otuREP_5be92221647da410da4a9bec43b4e8c5, putative proteorhodopsin gene, partial cds. KJ928571 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/A subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTAATAACGGTACCATTGCAAATTGTAGAATTCTATCTCATACTTGCAGCTGTGACTAAGGTGAACGCCAATGTATTTTGGAAGTTACTAATCGGGTCACTGGTGATGCTCATTGGGGGATATGTTGGTGAAACAAATGAGGCCTATCAAACTCAAGGATTTTTTGTAGGCATGATTGGGTGGTTGTACATAATTTGGGAAATTTTCAAGGGTGAAGCTTCTAAACTCAATGAAAACAGTGGAAATGCTGCCTGCCAACAAGCCTTCAAAACTATTCGACTAATTGTTACTTTT LITVPLQIVEFYLILAAVTKVNANVFWKLLIGSLVMLIGGYVGETNEAYQTQGFFVGMIGWLYIIWEIFKGEASKLNENSGNAACQQAFKTIRLIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATAACGGTACCATTGCAAATTGTAGAATTCTATCTCATACTTGCAGCT---------GTG---ACTAAGGTGAACGCC---AATGTA------------------------------------TTTTGGAAG---TTACTAATCGGGTCACTGGTGATGCTCATTGGGGGATATGTTGGTGAA---------ACA------------------AAT------GAG---------------------------------GCC------------------------------------------------------------------TATCAA------------------ACTCAAGGA---TTTTTTGTAGGCATGATTGGGTGGTTGTACATAATTTGGGAAATT---------------TTC------AAG---GGTGAAGCTTCTAAACTCAATGAAAAC------AGT---GGAAATGCTGCCTGC---CAA---CAA---GCC---TTC---AAA---ACTATT---CGACTAATTGTTACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TKVNA-NV------------FWK-LLIGSLVMLIGGYVGE---T------N--E-----------A----------------------YQ------TQG-FFVGMIGWLYIIWEI-----F--K-GEASKLNEN--S-GNAAC-Q-Q-A-F-K-TI-RLIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-a]_KJ928578 [I-Planctomycetes-a] PRGD_OTU042_33325ed428403d67e5a94b90a4cfb29c gb|KJ928578| PRGD_OTU042_33325ed428403d67e5a94b90a4cfb29c, putative proteorhodopsin gene, partial cds. PRGD_OTU042_33325ed428403d67e5a94b90a4cfb29c, putative proteorhodopsin gene, partial cds. KJ928578 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/A subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTATTACTGTCCCATTGCAGATTGTAGAATTTTATCTGATTTTAGCAGCTGTAACCAAGGTCAACGCCAATGTATTCTGGAAGTTATTACTCGGATCACTGGTTATGCTTATAGGAGGTTATGTTGGTGAAACTAATGAAGTCTATAAAACACAAGGATTTGTTGTAGGCATGGCAGGATGGATCTACATTATTTGGGAAATATTTAAGGGTGAAGCTTCTCAACTTAATGAAAATAGTGGAAATGCTGCGTGTCAACAAGCCTTCAAAACTATACGACTGATTGTAACTTTT LITVPLQIVEFYLILAAVTKVNANVFWKLLLGSLVMLIGGYVGETNEVYKTQGFVVGMAGWIYIIWEIFKGEASQLNENSGNAACQQAFKTIRLIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATTACTGTCCCATTGCAGATTGTAGAATTTTATCTGATTTTAGCAGCT---------GTA---ACCAAGGTCAACGCC---AATGTA------------------------------------TTCTGGAAG---TTATTACTCGGATCACTGGTTATGCTTATAGGAGGTTATGTTGGTGAA---------ACT------------------AAT------GAA---------------------------------GTC------------------------------------------------------------------TATAAA------------------ACACAAGGA---TTTGTTGTAGGCATGGCAGGATGGATCTACATTATTTGGGAAATA---------------TTT------AAG---GGTGAAGCTTCTCAACTTAATGAAAAT------AGT---GGAAATGCTGCGTGT---CAA---CAA---GCC---TTC---AAA---ACTATA---CGACTGATTGTAACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TKVNA-NV------------FWK-LLLGSLVMLIGGYVGE---T------N--E-----------V----------------------YK------TQG-FVVGMAGWIYIIWEI-----F--K-GEASQLNEN--S-GNAAC-Q-Q-A-F-K-TI-RLIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-a]_KJ928574 [I-Planctomycetes-a] PRGD_OTU042_25b1da417f99a9c8eeb47744cf70509e gb|KJ928574| PRGD_OTU042_25b1da417f99a9c8eeb47744cf70509e, putative proteorhodopsin gene, partial cds. PRGD_OTU042_25b1da417f99a9c8eeb47744cf70509e, putative proteorhodopsin gene, partial cds. KJ928574 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/A subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) TTGATAACCGTGCCACTTCAAATCGTAGAATTTTATCTCATCTTAACCGCTGTAACTAAAGTTGATGTCAGGGTGTTTTGGAGGTTATTGCTAGGTTCCTTGGTCATGCTTATAGGAGGTTATGTTGGGGAAACCAATGAAGCCTACCAAAATGGGGGCTTTATTATAGGTATGGCTGGCTGGATTTACATCATTTGGGAAATATTCAAAGGTGAAGCTTCTCAACTTAATGAAAACAGTGGGAATGCTGCTAGCCAACAAGCTTTCAAAACCATCCGTTTGATTGTAACTTTT LITVPLQIVEFYLILTAVTKVDVRVFWRLLLGSLVMLIGGYVGETNEAYQNGGFIIGMAGWIYIIWEIFKGEASQLNENSGNAASQQAFKTIRLIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACCGTGCCACTTCAAATCGTAGAATTTTATCTCATCTTAACCGCT---------GTA---ACTAAAGTTGATGTC---AGGGTG------------------------------------TTTTGGAGG---TTATTGCTAGGTTCCTTGGTCATGCTTATAGGAGGTTATGTTGGGGAA---------ACC------------------AAT------GAA---------------------------------GCC------------------------------------------------------------------TACCAA------------------AATGGGGGC---TTTATTATAGGTATGGCTGGCTGGATTTACATCATTTGGGAAATA---------------TTC------AAA---GGTGAAGCTTCTCAACTTAATGAAAAC------AGT---GGGAATGCTGCTAGC---CAA---CAA---GCT---TTC---AAA---ACCATC---CGTTTGATTGTAACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILTA---V-TKVDV-RV------------FWR-LLLGSLVMLIGGYVGE---T------N--E-----------A----------------------YQ------NGG-FIIGMAGWIYIIWEI-----F--K-GEASQLNEN--S-GNAAS-Q-Q-A-F-K-TI-RLIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-a]_KJ928590 [I-Planctomycetes-a] PRGD_OTU042_bc5a19a4f8e79db5a6ba6f8c94664c71 gb|KJ928590| PRGD_OTU042_bc5a19a4f8e79db5a6ba6f8c94664c71, putative proteorhodopsin gene, partial cds. PRGD_OTU042_bc5a19a4f8e79db5a6ba6f8c94664c71, putative proteorhodopsin gene, partial cds. KJ928590 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/A subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTGATAACCGTGCCACTTCAAATCGTAGAATTTTATCTCATCTTAACCGCTGTAACTAAAGTTGATGTCAGGGTTTTTTGGAGGTTATTGCTAGGTTCCTTGGTCATGCTTATTGGAGGTTATGTTGGGGAAACCAATGAAGCTTACCAAAATGGGGGCTTTATTGTAGGTATGGCTGGCTGGATTTACATCATTTGGGAAATATTCAAAGGTGAAGCTTCTCAACTTAATGAAAACAGTGGGAATGCTGCTAGCCAACAAGCTTTCAAAACCATCCGTTTGATTGTAACTTTT LITVPLQIVEFYLILTAVTKVDVRVFWRLLLGSLVMLIGGYVGETNEAYQNGGFIVGMAGWIYIIWEIFKGEASQLNENSGNAASQQAFKTIRLIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACCGTGCCACTTCAAATCGTAGAATTTTATCTCATCTTAACCGCT---------GTA---ACTAAAGTTGATGTC---AGGGTT------------------------------------TTTTGGAGG---TTATTGCTAGGTTCCTTGGTCATGCTTATTGGAGGTTATGTTGGGGAA---------ACC------------------AAT------GAA---------------------------------GCT------------------------------------------------------------------TACCAA------------------AATGGGGGC---TTTATTGTAGGTATGGCTGGCTGGATTTACATCATTTGGGAAATA---------------TTC------AAA---GGTGAAGCTTCTCAACTTAATGAAAAC------AGT---GGGAATGCTGCTAGC---CAA---CAA---GCT---TTC---AAA---ACCATC---CGTTTGATTGTAACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILTA---V-TKVDV-RV------------FWR-LLLGSLVMLIGGYVGE---T------N--E-----------A----------------------YQ------NGG-FIVGMAGWIYIIWEI-----F--K-GEASQLNEN--S-GNAAS-Q-Q-A-F-K-TI-RLIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-a]_KJ928585 [I-Planctomycetes-a] PRGD_OTU042_7de7baf0e34e61ecbd16267d8945751a gb|KJ928585| PRGD_OTU042_7de7baf0e34e61ecbd16267d8945751a, putative proteorhodopsin gene, partial cds. PRGD_OTU042_7de7baf0e34e61ecbd16267d8945751a, putative proteorhodopsin gene, partial cds. KJ928585 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/A subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.935 18.508 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637), Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) TTGATAACCGTGCCACTTCAAATCGTAGAATTTTATCTCATCTTAACCGCAGTAACTAAAGTTGATGTCAGGGTGTTTTGGAGGTTATTGCTAGGTTCCTTAGTTATGCTTATAGGAGGTTATGTTGGGGAAACCAATGAAGCCTACCAAAATGGGGGCTTTATTGTAGGTATGGCTGGCTGGATTTACATCATTTGGGAAATATTCAAGGGTGAAGCTTCTCAACTTAATGAAAACAGTGGGAATGCTGCTAGCCAACAAGCTTTCAAAACAATTCGTGCGATTGTAACTTTT LITVPLQIVEFYLILTAVTKVDVRVFWRLLLGSLVMLIGGYVGETNEAYQNGGFIVGMAGWIYIIWEIFKGEASQLNENSGNAASQQAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACCGTGCCACTTCAAATCGTAGAATTTTATCTCATCTTAACCGCA---------GTA---ACTAAAGTTGATGTC---AGGGTG------------------------------------TTTTGGAGG---TTATTGCTAGGTTCCTTAGTTATGCTTATAGGAGGTTATGTTGGGGAA---------ACC------------------AAT------GAA---------------------------------GCC------------------------------------------------------------------TACCAA------------------AATGGGGGC---TTTATTGTAGGTATGGCTGGCTGGATTTACATCATTTGGGAAATA---------------TTC------AAG---GGTGAAGCTTCTCAACTTAATGAAAAC------AGT---GGGAATGCTGCTAGC---CAA---CAA---GCT---TTC---AAA---ACAATT---CGTGCGATTGTAACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILTA---V-TKVDV-RV------------FWR-LLLGSLVMLIGGYVGE---T------N--E-----------A----------------------YQ------NGG-FIVGMAGWIYIIWEI-----F--K-GEASQLNEN--S-GNAAS-Q-Q-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-a]_KJ928587 [I-Planctomycetes-a] PRGD_OTU042_a8654a5c9f2db2f2eca087e5847de278 gb|KJ928587| PRGD_OTU042_a8654a5c9f2db2f2eca087e5847de278, putative proteorhodopsin gene, partial cds. PRGD_OTU042_a8654a5c9f2db2f2eca087e5847de278, putative proteorhodopsin gene, partial cds. KJ928587 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/A subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATAACCGTGCCACTGCAAATCGTAGAATTTTATCTCATCTTAACCGCAGTAACTAAAGTTGAAATCAGGGTGTTTTGGAAGTTATTGATTGCTTCCTTGGTTATGCTTATTGGAGGTTATGTTGGGGAAACCAATGAAGCCTTCATGTGGCAAGGCTTTCTTTTAGGTATGGCTGGCTGGATTTACATCATTTGGGAAATATTCAAAGGTGAAGCTTCTCAACTTAATGAAAACAGTGGGAATGCTGCTAGCCAACAAGCTTTCAAAACAATTCGTGCGATTGTAACTTTT LITVPLQIVEFYLILTAVTKVEIRVFWKLLIASLVMLIGGYVGETNEAFMWQGFLLGMAGWIYIIWEIFKGEASQLNENSGNAASQQAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACCGTGCCACTGCAAATCGTAGAATTTTATCTCATCTTAACCGCA---------GTA---ACTAAAGTTGAAATC---AGGGTG------------------------------------TTTTGGAAG---TTATTGATTGCTTCCTTGGTTATGCTTATTGGAGGTTATGTTGGGGAA---------ACC------------------AAT------GAA---------------------------------GCC------------------------------------------------------------------TTCATG------------------TGGCAAGGC---TTTCTTTTAGGTATGGCTGGCTGGATTTACATCATTTGGGAAATA---------------TTC------AAA---GGTGAAGCTTCTCAACTTAATGAAAAC------AGT---GGGAATGCTGCTAGC---CAA---CAA---GCT---TTC---AAA---ACAATT---CGTGCGATTGTAACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILTA---V-TKVEI-RV------------FWK-LLIASLVMLIGGYVGE---T------N--E-----------A----------------------FM------WQG-FLLGMAGWIYIIWEI-----F--K-GEASQLNEN--S-GNAAS-Q-Q-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-a]_KJ928589 [I-Planctomycetes-a] PRGD_OTU042_aaf8a6d8b5f7ddfed0d5ce88cc5620d3 gb|KJ928589| PRGD_OTU042_aaf8a6d8b5f7ddfed0d5ce88cc5620d3, putative proteorhodopsin gene, partial cds. PRGD_OTU042_aaf8a6d8b5f7ddfed0d5ce88cc5620d3, putative proteorhodopsin gene, partial cds. KJ928589 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/A subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATAACCGTGCCACTTCAAATCGTAGAATTTTATCTCATCTTAACCGCAGTAACTAAAGTTGATGCTAGGGTGTTTTGGAAGTTATTGTTAGGTTCCTTGGTCATGCTTATAGGAGGTTATGTTGGGGAAACCAATGAAGCCTACCAAACCCAAGGCTTTGTTGTAGGTATGGCTGGCTGGATTTACATTATTTGGGAAATATTCAAAGGTGAAGCTTCTCAACTTAATGAAAACAGTGGGAATGCTGCTAGCCAACAAGCTTTCAAAACAATTCGTGCGATTGTAACTTTT LITVPLQIVEFYLILTAVTKVDARVFWKLLLGSLVMLIGGYVGETNEAYQTQGFVVGMAGWIYIIWEIFKGEASQLNENSGNAASQQAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACCGTGCCACTTCAAATCGTAGAATTTTATCTCATCTTAACCGCA---------GTA---ACTAAAGTTGATGCT---AGGGTG------------------------------------TTTTGGAAG---TTATTGTTAGGTTCCTTGGTCATGCTTATAGGAGGTTATGTTGGGGAA---------ACC------------------AAT------GAA---------------------------------GCC------------------------------------------------------------------TACCAA------------------ACCCAAGGC---TTTGTTGTAGGTATGGCTGGCTGGATTTACATTATTTGGGAAATA---------------TTC------AAA---GGTGAAGCTTCTCAACTTAATGAAAAC------AGT---GGGAATGCTGCTAGC---CAA---CAA---GCT---TTC---AAA---ACAATT---CGTGCGATTGTAACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILTA---V-TKVDA-RV------------FWK-LLLGSLVMLIGGYVGE---T------N--E-----------A----------------------YQ------TQG-FVVGMAGWIYIIWEI-----F--K-GEASQLNEN--S-GNAAS-Q-Q-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-a]_KJ928593 [I-Planctomycetes-a] PRGD_OTU042_eb5595e5cceb3ce098465523477b0442 gb|KJ928593| PRGD_OTU042_eb5595e5cceb3ce098465523477b0442, putative proteorhodopsin gene, partial cds. PRGD_OTU042_eb5595e5cceb3ce098465523477b0442, putative proteorhodopsin gene, partial cds. KJ928593 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/A subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683) TTGATAACCGTGCCACTTCAAATCGTAGAATTTTATCTCATCTTAACCGCAGTAACTAAAGTTGATGCCAGGGTGTTTTGGAAGTTATTGATCGGTTCCTTGGTCATGCTTATAGGAGGTTATGTTGGGGAGACCAATGAAGCCTACCAAACCCAAGGCTTTGTTGTAGGTATGGCTGGCTGGATTTACATTATTTGGGAAATATTCAAAGGTGAAGCTTCTCAACTTAATGAAAACAGTGGGAATGCTGCTAGCCAACAAGCTTTCAAAACAATTCGTGCGATTGTAACTTTT LITVPLQIVEFYLILTAVTKVDARVFWKLLIGSLVMLIGGYVGETNEAYQTQGFVVGMAGWIYIIWEIFKGEASQLNENSGNAASQQAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACCGTGCCACTTCAAATCGTAGAATTTTATCTCATCTTAACCGCA---------GTA---ACTAAAGTTGATGCC---AGGGTG------------------------------------TTTTGGAAG---TTATTGATCGGTTCCTTGGTCATGCTTATAGGAGGTTATGTTGGGGAG---------ACC------------------AAT------GAA---------------------------------GCC------------------------------------------------------------------TACCAA------------------ACCCAAGGC---TTTGTTGTAGGTATGGCTGGCTGGATTTACATTATTTGGGAAATA---------------TTC------AAA---GGTGAAGCTTCTCAACTTAATGAAAAC------AGT---GGGAATGCTGCTAGC---CAA---CAA---GCT---TTC---AAA---ACAATT---CGTGCGATTGTAACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILTA---V-TKVDA-RV------------FWK-LLIGSLVMLIGGYVGE---T------N--E-----------A----------------------YQ------TQG-FVVGMAGWIYIIWEI-----F--K-GEASQLNEN--S-GNAAS-Q-Q-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-a]_KJ928572 [I-Planctomycetes-a] PRGD_OTU042_02f9b5a832a85a807d2b7f0d4d31be03 gb|KJ928572| PRGD_OTU042_02f9b5a832a85a807d2b7f0d4d31be03, putative proteorhodopsin gene, partial cds. PRGD_OTU042_02f9b5a832a85a807d2b7f0d4d31be03, putative proteorhodopsin gene, partial cds. KJ928572 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/A subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCATAACTGTACCTCTTCAAATCATTGAATTTTACCTCATTTTGTCAGCTGTCACAAAAGTTAATGTTAATGTTTTCTGGAGGTTATTGATTGGATCTCTGGTCATGCTTATAGGAGGTTATGTTGGGGAAACCAATCCAGACTACCAACAAGGAGGCTTCTTCGTAGGAATGGCTGGATGGATTTACATTATCTATGAAATATTCAAGGGCGAAGCTTCTAAGCTCAATGAAAACAGTGGGAATGCTGCTAGCCAACAAGCTTTCAAAACAATTCGTGCGATTGTAACTTTT LITVPLQIIEFYLILSAVTKVNVNVFWRLLIGSLVMLIGGYVGETNPDYQQGGFFVGMAGWIYIIYEIFKGEASKLNENSGNAASQQAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATAACTGTACCTCTTCAAATCATTGAATTTTACCTCATTTTGTCAGCT---------GTC---ACAAAAGTTAATGTT---AATGTT------------------------------------TTCTGGAGG---TTATTGATTGGATCTCTGGTCATGCTTATAGGAGGTTATGTTGGGGAA---------ACC------------------AAT------CCA---------------------------------GAC------------------------------------------------------------------TACCAA------------------CAAGGAGGC---TTCTTCGTAGGAATGGCTGGATGGATTTACATTATCTATGAAATA---------------TTC------AAG---GGCGAAGCTTCTAAGCTCAATGAAAAC------AGT---GGGAATGCTGCTAGC---CAA---CAA---GCT---TTC---AAA---ACAATT---CGTGCGATTGTAACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLILSA---V-TKVNV-NV------------FWR-LLIGSLVMLIGGYVGE---T------N--P-----------D----------------------YQ------QGG-FFVGMAGWIYIIYEI-----F--K-GEASKLNEN--S-GNAAS-Q-Q-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-a]_KJ928586 [I-Planctomycetes-a] PRGD_OTU042_8b58277eb288eab775fc3a63536bc7aa gb|KJ928586| PRGD_OTU042_8b58277eb288eab775fc3a63536bc7aa, putative proteorhodopsin gene, partial cds. PRGD_OTU042_8b58277eb288eab775fc3a63536bc7aa, putative proteorhodopsin gene, partial cds. KJ928586 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/A subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCATAACTGTACCTCTTCAAATCATTGAATTTTATCTCATTTTGTCAGCTGTCACAAAAGTTAATGTTAATGTTTTCTGGAGGTTATTGATTGGATCTTTGGTCATGCTTGTAGGAGGTTATGTTGGTGAAACCAATCCAGACTACCAACAAGGAGGCTTCTTCGTAGGAATGGCTGGATGGATTTACATTATCTATGAAATATTCAAGGGCGAAGCTTCTAAGCTCAATGAAAACAGTGGGAATGCTGCTAGCCAACAAGCTTTCAAAACAATTCGTGCGATTGTAACTTTT LITVPLQIIEFYLILSAVTKVNVNVFWRLLIGSLVMLVGGYVGETNPDYQQGGFFVGMAGWIYIIYEIFKGEASKLNENSGNAASQQAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATAACTGTACCTCTTCAAATCATTGAATTTTATCTCATTTTGTCAGCT---------GTC---ACAAAAGTTAATGTT---AATGTT------------------------------------TTCTGGAGG---TTATTGATTGGATCTTTGGTCATGCTTGTAGGAGGTTATGTTGGTGAA---------ACC------------------AAT------CCA---------------------------------GAC------------------------------------------------------------------TACCAA------------------CAAGGAGGC---TTCTTCGTAGGAATGGCTGGATGGATTTACATTATCTATGAAATA---------------TTC------AAG---GGCGAAGCTTCTAAGCTCAATGAAAAC------AGT---GGGAATGCTGCTAGC---CAA---CAA---GCT---TTC---AAA---ACAATT---CGTGCGATTGTAACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLILSA---V-TKVNV-NV------------FWR-LLIGSLVMLVGGYVGE---T------N--P-----------D----------------------YQ------QGG-FFVGMAGWIYIIYEI-----F--K-GEASKLNEN--S-GNAAS-Q-Q-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-a]_KJ928591 [I-Planctomycetes-a] PRGD_OTU042_c09e2bd409a3a53397fc29d155e4550b gb|KJ928591| PRGD_OTU042_c09e2bd409a3a53397fc29d155e4550b, putative proteorhodopsin gene, partial cds. PRGD_OTU042_c09e2bd409a3a53397fc29d155e4550b, putative proteorhodopsin gene, partial cds. KJ928591 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/A subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTCATAACTGTACCTCTTCAAATCATTGAATTTTATCTCATTTTGTCAGCTGTCACTAAAGTTAATGTTAATGTTTTCTGGAGGTTATTGATTGGATCTTTGGTCATGCTTATAGGAGGTTATGTTGGGGAAACCAATCCAGACTACCAACAAGGAGGCTTCTTCGTAGGAATGGCTGGATGGATTTACATTATCTATGAAATATTCAAGGGCGAAGCTTCTAAGCTCAATGAAAACAGTGGGAATGCTGCTAGCCAACAAGCTTTCAAAACAATTCGTGCGATTGTAACTTTT LITVPLQIIEFYLILSAVTKVNVNVFWRLLIGSLVMLIGGYVGETNPDYQQGGFFVGMAGWIYIIYEIFKGEASKLNENSGNAASQQAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATAACTGTACCTCTTCAAATCATTGAATTTTATCTCATTTTGTCAGCT---------GTC---ACTAAAGTTAATGTT---AATGTT------------------------------------TTCTGGAGG---TTATTGATTGGATCTTTGGTCATGCTTATAGGAGGTTATGTTGGGGAA---------ACC------------------AAT------CCA---------------------------------GAC------------------------------------------------------------------TACCAA------------------CAAGGAGGC---TTCTTCGTAGGAATGGCTGGATGGATTTACATTATCTATGAAATA---------------TTC------AAG---GGCGAAGCTTCTAAGCTCAATGAAAAC------AGT---GGGAATGCTGCTAGC---CAA---CAA---GCT---TTC---AAA---ACAATT---CGTGCGATTGTAACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLILSA---V-TKVNV-NV------------FWR-LLIGSLVMLIGGYVGE---T------N--P-----------D----------------------YQ------QGG-FFVGMAGWIYIIYEI-----F--K-GEASKLNEN--S-GNAAS-Q-Q-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-a]_KJ928582 [I-Planctomycetes-a] PRGD_OTU042_54f69dbf52264d4e4b88388265d6841e gb|KJ928582| PRGD_OTU042_54f69dbf52264d4e4b88388265d6841e, putative proteorhodopsin gene, partial cds. PRGD_OTU042_54f69dbf52264d4e4b88388265d6841e, putative proteorhodopsin gene, partial cds. KJ928582 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/A subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508) CTCATAACTGTACCTCTCCAAATCATTGAATTTTATCTCATTTTGTCAGCTGTCACCAAAGTTAATGTTAATGTTTTCTGGAGGTTATTGATTGGATCTTTGGTCATGCTTATAGGAGGTTATGTTGGGGAAACCAATGAAGCCTACCAAAACCAAGGCTTCTTCGTAGGTATGGCTGGATGGATTTACATTATCTATGAAATATTCAAGGGCGAAGCTTCTAAGCTCAATGAAAACAGTGGGAATGCTGCTAGCCAACAAGCTTTCAAAACAATTCGTGCGATTGTAACTTTT LITVPLQIIEFYLILSAVTKVNVNVFWRLLIGSLVMLIGGYVGETNEAYQNQGFFVGMAGWIYIIYEIFKGEASKLNENSGNAASQQAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATAACTGTACCTCTCCAAATCATTGAATTTTATCTCATTTTGTCAGCT---------GTC---ACCAAAGTTAATGTT---AATGTT------------------------------------TTCTGGAGG---TTATTGATTGGATCTTTGGTCATGCTTATAGGAGGTTATGTTGGGGAA---------ACC------------------AAT------GAA---------------------------------GCC------------------------------------------------------------------TACCAA------------------AACCAAGGC---TTCTTCGTAGGTATGGCTGGATGGATTTACATTATCTATGAAATA---------------TTC------AAG---GGCGAAGCTTCTAAGCTCAATGAAAAC------AGT---GGGAATGCTGCTAGC---CAA---CAA---GCT---TTC---AAA---ACAATT---CGTGCGATTGTAACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLILSA---V-TKVNV-NV------------FWR-LLIGSLVMLIGGYVGE---T------N--E-----------A----------------------YQ------NQG-FFVGMAGWIYIIYEI-----F--K-GEASKLNEN--S-GNAAS-Q-Q-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-a]_KJ928580 [I-Planctomycetes-a] PRGD_OTU042_445470b522d5b7a28bdb143a3444fe48 gb|KJ928580| PRGD_OTU042_445470b522d5b7a28bdb143a3444fe48, putative proteorhodopsin gene, partial cds. PRGD_OTU042_445470b522d5b7a28bdb143a3444fe48, putative proteorhodopsin gene, partial cds. KJ928580 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/A subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; ; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTCATAACTGTACCTCTCCAAATCATTGAATTTTATCTCATTTTGTCAGCTGTCACCAAAGTTAATGTTAACGTTTTCTGGAGGTTATTGATTGGATCTTTGGTCATGCTTATAGGAGGTTATGTTGGGGAAACCAATGAAGCCTACCAAAACCAAGGCTTCCTCGTAGGTATGGCTGGCTGGATTTACATCATTTGGGAAATATTCAAAGGCGAAGCTTCTAAGCTCAATGAAAACAGTGGGAATGCTGCTAGCCAACAAGCTTTCAAAACAATTCGTGCGATTGTAACTTTT LITVPLQIIEFYLILSAVTKVNVNVFWRLLIGSLVMLIGGYVGETNEAYQNQGFLVGMAGWIYIIWEIFKGEASKLNENSGNAASQQAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATAACTGTACCTCTCCAAATCATTGAATTTTATCTCATTTTGTCAGCT---------GTC---ACCAAAGTTAATGTT---AACGTT------------------------------------TTCTGGAGG---TTATTGATTGGATCTTTGGTCATGCTTATAGGAGGTTATGTTGGGGAA---------ACC------------------AAT------GAA---------------------------------GCC------------------------------------------------------------------TACCAA------------------AACCAAGGC---TTCCTCGTAGGTATGGCTGGCTGGATTTACATCATTTGGGAAATA---------------TTC------AAA---GGCGAAGCTTCTAAGCTCAATGAAAAC------AGT---GGGAATGCTGCTAGC---CAA---CAA---GCT---TTC---AAA---ACAATT---CGTGCGATTGTAACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLILSA---V-TKVNV-NV------------FWR-LLIGSLVMLIGGYVGE---T------N--E-----------A----------------------YQ------NQG-FLVGMAGWIYIIWEI-----F--K-GEASKLNEN--S-GNAAS-Q-Q-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-a]_KJ928576 [I-Planctomycetes-a] PRGD_OTU042_2c7496761489038045c342f5ed762561 gb|KJ928576| PRGD_OTU042_2c7496761489038045c342f5ed762561, putative proteorhodopsin gene, partial cds. PRGD_OTU042_2c7496761489038045c342f5ed762561, putative proteorhodopsin gene, partial cds. KJ928576 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/A subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937), Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTGATAACCGTGCCACTCCAAATCGTAGAATTTTATCTGATTCTTGCCGCTGTTACCAAAGTCAATGCCAATGTATTCTGGAAGCTGTTGCTAGGATCCTTGGTTATGCTCATTGGAGGATATGTTGGTGAAACCAATGAAGTCTATCAAACTCAAGGATTTGTAGTTGGAATGGCTGGCTGGATATACATCATTTGGGAAATATTCAAGGGCGAGGCGTCGCAACTCAATGAAAACAGTGGGAATGCAGCCTGCCAACAAGCTTTTAAGACCATTCGTGCAATCGTAACTTTT LITVPLQIVEFYLILAAVTKVNANVFWKLLLGSLVMLIGGYVGETNEVYQTQGFVVGMAGWIYIIWEIFKGEASQLNENSGNAACQQAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACCGTGCCACTCCAAATCGTAGAATTTTATCTGATTCTTGCCGCT---------GTT---ACCAAAGTCAATGCC---AATGTA------------------------------------TTCTGGAAG---CTGTTGCTAGGATCCTTGGTTATGCTCATTGGAGGATATGTTGGTGAA---------ACC------------------AAT------GAA---------------------------------GTC------------------------------------------------------------------TATCAA------------------ACTCAAGGA---TTTGTAGTTGGAATGGCTGGCTGGATATACATCATTTGGGAAATA---------------TTC------AAG---GGCGAGGCGTCGCAACTCAATGAAAAC------AGT---GGGAATGCAGCCTGC---CAA---CAA---GCT---TTT---AAG---ACCATT---CGTGCAATCGTAACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TKVNA-NV------------FWK-LLLGSLVMLIGGYVGE---T------N--E-----------V----------------------YQ------TQG-FVVGMAGWIYIIWEI-----F--K-GEASQLNEN--S-GNAAC-Q-Q-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-a]_KJ928588 [I-Planctomycetes-a] PRGD_OTU042_a8dd7d8ebab8834c7afb9197462a0e9e gb|KJ928588| PRGD_OTU042_a8dd7d8ebab8834c7afb9197462a0e9e, putative proteorhodopsin gene, partial cds. PRGD_OTU042_a8dd7d8ebab8834c7afb9197462a0e9e, putative proteorhodopsin gene, partial cds. KJ928588 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/A subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTGATAACCGTGCCACTTCAAATCGTAGAATTTTATCTTATCTTAACCGCTGTAACTAAAGTTGATGTCAGGGTGTTTTGGAGGTTATTGTTAGGATCCTTGGTTATGCTCATTGGTGGATATGTAGGCGAAACCAATGAAGCCTATCAGAATGGGGGCTTTGTTGTAGGTATGCTTGGCTGGATTTACATCATTTGGGAAATATTCAAGGGCGAGGCGTCGCAACTCAATGAAAACAGTGGGAATGCAGCCTGCCAACAAGCTTTTAAGACCATTCGTGCAATCGTAACTTTT LITVPLQIVEFYLILTAVTKVDVRVFWRLLLGSLVMLIGGYVGETNEAYQNGGFVVGMLGWIYIIWEIFKGEASQLNENSGNAACQQAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACCGTGCCACTTCAAATCGTAGAATTTTATCTTATCTTAACCGCT---------GTA---ACTAAAGTTGATGTC---AGGGTG------------------------------------TTTTGGAGG---TTATTGTTAGGATCCTTGGTTATGCTCATTGGTGGATATGTAGGCGAA---------ACC------------------AAT------GAA---------------------------------GCC------------------------------------------------------------------TATCAG------------------AATGGGGGC---TTTGTTGTAGGTATGCTTGGCTGGATTTACATCATTTGGGAAATA---------------TTC------AAG---GGCGAGGCGTCGCAACTCAATGAAAAC------AGT---GGGAATGCAGCCTGC---CAA---CAA---GCT---TTT---AAG---ACCATT---CGTGCAATCGTAACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILTA---V-TKVDV-RV------------FWR-LLLGSLVMLIGGYVGE---T------N--E-----------A----------------------YQ------NGG-FVVGMLGWIYIIWEI-----F--K-GEASQLNEN--S-GNAAC-Q-Q-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-a]_KJ929648 [I-Planctomycetes-a] PRGD_OTU181_55b36feb8cd702ee46bf69431578e8b8 gb|KJ929648| PRGD_OTU181_55b36feb8cd702ee46bf69431578e8b8, putative proteorhodopsin gene, partial cds. PRGD_OTU181_55b36feb8cd702ee46bf69431578e8b8, putative proteorhodopsin gene, partial cds. KJ929648 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/A subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACCGTTCCTTTACAAATTATTGAATTTTACATTATCTTGGCGGCCGTCACAGTTGTAAGAGCGAATTTATTTTGGAAACTTTTAGTCGCTTCTCTCGTAATGCTTATCGGTGGCTATGCGGGTGAAGTCAGCGAAGCGTACCGGGTATCAGGTTTCATAGTAGGCATGGTTGGTTGGTTGTACATTGTTTACGAAATATTCAAAGGCGAAGCTTCTCAACTCAACGAAAACAGCGGCAACGCCGCAAGTCAGCAAGCCTTCAAAACCATTCGGGCAATTGTTACCTTT LITVPLQIIEFYIILAAVTVVRANLFWKLLVASLVMLIGGYAGEVSEAYRVSGFIVGMVGWLYIVYEIFKGEASQLNENSGNAASQQAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCGTTCCTTTACAAATTATTGAATTTTACATTATCTTGGCGGCC---------GTC---ACAGTTGTAAGAGCG---AATTTA------------------------------------TTTTGGAAA---CTTTTAGTCGCTTCTCTCGTAATGCTTATCGGTGGCTATGCGGGTGAA---------GTC------------------AGC------GAA---------------------------------GCG------------------------------------------------------------------TACCGG------------------GTATCAGGT---TTCATAGTAGGCATGGTTGGTTGGTTGTACATTGTTTACGAAATA---------------TTC------AAA---GGCGAAGCTTCTCAACTCAACGAAAAC------AGC---GGCAACGCCGCAAGT---CAG---CAA---GCC---TTC---AAA---ACCATT---CGGGCAATTGTTACCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYIILAA---V-TVVRA-NL------------FWK-LLVASLVMLIGGYAGE---V------S--E-----------A----------------------YR------VSG-FIVGMVGWLYIVYEI-----F--K-GEASQLNEN--S-GNAAS-Q-Q-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-a]_KJ929649 [I-Planctomycetes-a] PRGD_OTU181_b86c085d8bc22289a54fbc0a8e192c82 gb|KJ929649| PRGD_OTU181_b86c085d8bc22289a54fbc0a8e192c82, putative proteorhodopsin gene, partial cds. PRGD_OTU181_b86c085d8bc22289a54fbc0a8e192c82, putative proteorhodopsin gene, partial cds. KJ929649 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/A subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-33.28, 45.35) TTGATTACCGTTCCTTTACAAATTATTGAATTTTACATTATCTTGGCGGCCGTCACAGTTGTAAGAGCGAATTTATTTTGGAAACTTTTAGTCGCTTCTCTCGTAATGCTTATCGGTGGCTATGCGGGTGAAGTCAGCGAAGCGTACCGGGTATCAGGTTTCGTAGTAGGCATGGTTGGTTGGTTGTACATCGTTTACGAAATATTCAAAGGCGAAGCTTCTCAACTCAACGAAAACAGCGGTAACGCCGCAAGTCAGCAAGCCTTCAAAACCATTCGGGCAATTGTTACATTT LITVPLQIIEFYIILAAVTVVRANLFWKLLVASLVMLIGGYAGEVSEAYRVSGFVVGMVGWLYIVYEIFKGEASQLNENSGNAASQQAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACCGTTCCTTTACAAATTATTGAATTTTACATTATCTTGGCGGCC---------GTC---ACAGTTGTAAGAGCG---AATTTA------------------------------------TTTTGGAAA---CTTTTAGTCGCTTCTCTCGTAATGCTTATCGGTGGCTATGCGGGTGAA---------GTC------------------AGC------GAA---------------------------------GCG------------------------------------------------------------------TACCGG------------------GTATCAGGT---TTCGTAGTAGGCATGGTTGGTTGGTTGTACATCGTTTACGAAATA---------------TTC------AAA---GGCGAAGCTTCTCAACTCAACGAAAAC------AGC---GGTAACGCCGCAAGT---CAG---CAA---GCC---TTC---AAA---ACCATT---CGGGCAATTGTTACATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYIILAA---V-TVVRA-NL------------FWK-LLVASLVMLIGGYAGE---V------S--E-----------A----------------------YR------VSG-FVVGMVGWLYIVYEI-----F--K-GEASQLNEN--S-GNAAS-Q-Q-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes-a]_KJ929647 [I-Planctomycetes-a] PRGD_OTU181_otuREP_392653787391eea901cc3c65da5303d9 gb|KJ929647| PRGD_OTU181_otuREP_392653787391eea901cc3c65da5303d9, putative proteorhodopsin gene, partial cds. PRGD_OTU181_otuREP_392653787391eea901cc3c65da5303d9, putative proteorhodopsin gene, partial cds. KJ929647 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster/A subcluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATTACTGTCCCTCTTCAAATCATTGAATTCTACATTATCTTGGCTGCTGTTACAGTAGTAAGAGCCAGCCTCTTTTGGAAGCTTCTAGTCGCTTCTCTTATAATGCTTGTTGGTGGTTACGCAGGTGAAGTCAGCGAAGCCTACCGAGTATCAGGTTTTGTAGTAGGTATGGCTGGATGGTTGTACATCATTTACGAAATATTCAAAGGCGAAGCATCCCAGCTCAACGAAAAAAGCGGTAACGCAGCAAGTCAGCAAGCCTTTAAAACCATACGGGCAATCGTTACTTTT LITVPLQIIEFYIILAAVTVVRASLFWKLLVASLIMLVGGYAGEVSEAYRVSGFVVGMAGWLYIIYEIFKGEASQLNEKSGNAASQQAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTCCCTCTTCAAATCATTGAATTCTACATTATCTTGGCTGCT---------GTT---ACAGTAGTAAGAGCC---AGCCTC------------------------------------TTTTGGAAG---CTTCTAGTCGCTTCTCTTATAATGCTTGTTGGTGGTTACGCAGGTGAA---------GTC------------------AGC------GAA---------------------------------GCC------------------------------------------------------------------TACCGA------------------GTATCAGGT---TTTGTAGTAGGTATGGCTGGATGGTTGTACATCATTTACGAAATA---------------TTC------AAA---GGCGAAGCATCCCAGCTCAACGAAAAA------AGC---GGTAACGCAGCAAGT---CAG---CAA---GCC---TTT---AAA---ACCATA---CGGGCAATCGTTACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYIILAA---V-TVVRA-SL------------FWK-LLVASLIMLVGGYAGE---V------S--E-----------A----------------------YR------VSG-FVVGMAGWLYIIYEI-----F--K-GEASQLNEK--S-GNAAS-Q-Q-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes]_KJ928564 [I-Planctomycetes] PRGD_OTU041c_021332e4a425bf0aa95e9863ec1f2aa2 gb|KJ928564| PRGD_OTU041c_021332e4a425bf0aa95e9863ec1f2aa2, putative proteorhodopsin gene, partial cds. PRGD_OTU041c_021332e4a425bf0aa95e9863ec1f2aa2, putative proteorhodopsin gene, partial cds. KJ928564 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTTATTACAGTTCCACTACAAATAGTTGAATTTTATCTCATACTTGCTGCTGTTACAAAAGTTAGTGCGAATGTATTCTGGAAATTACTCATCGCTTCGATTGTCATGCTTGTTGGTGGATACATGGGCGAAGCCGGCTACATGGAAGTAACTCCTGCATTTGTAATCGGAATGGCGGGATGGATCTACATTATATACGAAATTTTTAAAGGAGAAGCATCTCAACTCAATGAAAACAGCGGCAACGCTGCAAGCCAGCAGGCTTTTAAAACTATACGTGCAATCGTTACATTT LITVPLQIVEFYLILAAVTKVSANVFWKLLIASIVMLVGGYMGEAGYMEVTPAFVIGMAGWIYIIYEIFKGEASQLNENSGNAASQQAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATTACAGTTCCACTACAAATAGTTGAATTTTATCTCATACTTGCTGCT---------GTT---ACAAAAGTTAGTGCG---AATGTA------------------------------------TTCTGGAAA---TTACTCATCGCTTCGATTGTCATGCTTGTTGGTGGATACATGGGCGAA---------GCC------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GAAGTA------------------ACTCCTGCA---TTTGTAATCGGAATGGCGGGATGGATCTACATTATATACGAAATT---------------TTT------AAA---GGAGAAGCATCTCAACTCAATGAAAAC------AGC---GGCAACGCTGCAAGC---CAG---CAG---GCT---TTT---AAA---ACTATA---CGTGCAATCGTTACATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TKVSA-NV------------FWK-LLIASIVMLVGGYMGE---A------G--Y-----------M----------------------EV------TPA-FVIGMAGWIYIIYEI-----F--K-GEASQLNEN--S-GNAAS-Q-Q-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes]_KJ928565 [I-Planctomycetes] PRGD_OTU041c_408f4957e39242876137ddd6fda171bf gb|KJ928565| PRGD_OTU041c_408f4957e39242876137ddd6fda171bf, putative proteorhodopsin gene, partial cds. PRGD_OTU041c_408f4957e39242876137ddd6fda171bf, putative proteorhodopsin gene, partial cds. KJ928565 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) CTTATTACAGTTCCACTACAAATAGTTGAATTTTATCTCATACTTGCTGCTGTTACAAAAGTTAGTGCGAATGTATTCTGGAAATTACTCATCGCTTCGATAGTCATGCTTGTTGGTGGATACATGGGCGAAGCCGGCTACATGGAAGTAACTCCTGCATTTGTAATCGGAATGGCGGGATGGATCTACATTATTTACGAAATTTTTAAAGGAGAAGCATCTCAACTCAATGAAAACAGCGGCAACGCTGCAAGCCAGCAGGCTTTTAAAACTATACGTGCAATCGTTACATTT LITVPLQIVEFYLILAAVTKVSANVFWKLLIASIVMLVGGYMGEAGYMEVTPAFVIGMAGWIYIIYEIFKGEASQLNENSGNAASQQAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATTACAGTTCCACTACAAATAGTTGAATTTTATCTCATACTTGCTGCT---------GTT---ACAAAAGTTAGTGCG---AATGTA------------------------------------TTCTGGAAA---TTACTCATCGCTTCGATAGTCATGCTTGTTGGTGGATACATGGGCGAA---------GCC------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GAAGTA------------------ACTCCTGCA---TTTGTAATCGGAATGGCGGGATGGATCTACATTATTTACGAAATT---------------TTT------AAA---GGAGAAGCATCTCAACTCAATGAAAAC------AGC---GGCAACGCTGCAAGC---CAG---CAG---GCT---TTT---AAA---ACTATA---CGTGCAATCGTTACATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TKVSA-NV------------FWK-LLIASIVMLVGGYMGE---A------G--Y-----------M----------------------EV------TPA-FVIGMAGWIYIIYEI-----F--K-GEASQLNEN--S-GNAAS-Q-Q-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes]_KJ928566 [I-Planctomycetes] PRGD_OTU041c_7894b0d31fbe50ccd992b653970b2259 gb|KJ928566| PRGD_OTU041c_7894b0d31fbe50ccd992b653970b2259, putative proteorhodopsin gene, partial cds. PRGD_OTU041c_7894b0d31fbe50ccd992b653970b2259, putative proteorhodopsin gene, partial cds. KJ928566 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-33.28, 45.35) CTTATTACAGTTCCACTACAAATAGTTGAATTTTATCTCATACTTGCTGCTGTTACAAAAGTTAATGCGAATGTATTCTGGAAATTACTCATCGCTTCGATAGTCATGCTTGTTGGTGGATACATGGGCGAAGCGGGTTACATGGAAGTAACGCCTGCATTTGTTATCGGAATGGCGGGATGGATCTACATTATATACGAAATTTTTAAAGGAGAAGCATCTCAACTCAATGAAAACAGCGGCAACGCTGCATGCCAGCAGGCTTTTAAAACTATACGTGCAATCGTTACATTT LITVPLQIVEFYLILAAVTKVNANVFWKLLIASIVMLVGGYMGEAGYMEVTPAFVIGMAGWIYIIYEIFKGEASQLNENSGNAACQQAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATTACAGTTCCACTACAAATAGTTGAATTTTATCTCATACTTGCTGCT---------GTT---ACAAAAGTTAATGCG---AATGTA------------------------------------TTCTGGAAA---TTACTCATCGCTTCGATAGTCATGCTTGTTGGTGGATACATGGGCGAA---------GCG------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GAAGTA------------------ACGCCTGCA---TTTGTTATCGGAATGGCGGGATGGATCTACATTATATACGAAATT---------------TTT------AAA---GGAGAAGCATCTCAACTCAATGAAAAC------AGC---GGCAACGCTGCATGC---CAG---CAG---GCT---TTT---AAA---ACTATA---CGTGCAATCGTTACATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TKVNA-NV------------FWK-LLIASIVMLVGGYMGE---A------G--Y-----------M----------------------EV------TPA-FVIGMAGWIYIIYEI-----F--K-GEASQLNEN--S-GNAAC-Q-Q-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes]_KJ928567 [I-Planctomycetes] PRGD_OTU041c_801922ae7085a85101b688c2b4b9f36e gb|KJ928567| PRGD_OTU041c_801922ae7085a85101b688c2b4b9f36e, putative proteorhodopsin gene, partial cds. PRGD_OTU041c_801922ae7085a85101b688c2b4b9f36e, putative proteorhodopsin gene, partial cds. KJ928567 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTTATTACAGTTCCACTACAAATAGTTGAATTTTATCTTATACTTGCTGCTGTTACAAAAGTTAATGCGAATGTATTCTGGAAATTACTCATCGCTTCGATAGTCATGCTTGTTGGTGGATACATGGGCGAAGCGGGTTACATGGAAGTAACGCCTGCATTTGTTATCGGAATGGCGGGATGGATTTACATTATATATGAAATTTTTAAAGGAGAAGCATCTCAACTCAATGAAAACAGCGGCAATGCAGCATGCCAGCAGGCTTTTAAAACTATACGTGCAATCGTTACATTT LITVPLQIVEFYLILAAVTKVNANVFWKLLIASIVMLVGGYMGEAGYMEVTPAFVIGMAGWIYIIYEIFKGEASQLNENSGNAACQQAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATTACAGTTCCACTACAAATAGTTGAATTTTATCTTATACTTGCTGCT---------GTT---ACAAAAGTTAATGCG---AATGTA------------------------------------TTCTGGAAA---TTACTCATCGCTTCGATAGTCATGCTTGTTGGTGGATACATGGGCGAA---------GCG------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GAAGTA------------------ACGCCTGCA---TTTGTTATCGGAATGGCGGGATGGATTTACATTATATATGAAATT---------------TTT------AAA---GGAGAAGCATCTCAACTCAATGAAAAC------AGC---GGCAATGCAGCATGC---CAG---CAG---GCT---TTT---AAA---ACTATA---CGTGCAATCGTTACATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TKVNA-NV------------FWK-LLIASIVMLVGGYMGE---A------G--Y-----------M----------------------EV------TPA-FVIGMAGWIYIIYEI-----F--K-GEASQLNEN--S-GNAAC-Q-Q-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes]_KJ928570 [I-Planctomycetes] PRGD_OTU041c_be53ee9735ca2936c655f99d7e840415 gb|KJ928570| PRGD_OTU041c_be53ee9735ca2936c655f99d7e840415, putative proteorhodopsin gene, partial cds. PRGD_OTU041c_be53ee9735ca2936c655f99d7e840415, putative proteorhodopsin gene, partial cds. KJ928570 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683) CTTATTACCGTACCGCTACAAATTGTTGAATTCTACCTTATTCTTGCAGCGGTAACCAAGGTAAGTGCCAATGTATTCTGGAAGTTACTAATTGCTTCTCTTGTTATGCTTGTCGGTGGATATATGGGTGAGGCTGGTTACATGGAAGTTATGCCCGCATTTATAATAGGAATGGCCGGATGGATTTACATAATCTACGAAATCTTTAAGGGTGAGGCTTCCCAACTCAATGAGAACAGTGGCAATGCTGCATGCCAACAAGCATTTAGAACCATTCGGGCAATTGTCACATTT LITVPLQIVEFYLILAAVTKVSANVFWKLLIASLVMLVGGYMGEAGYMEVMPAFIIGMAGWIYIIYEIFKGEASQLNENSGNAACQQAFRTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATTACCGTACCGCTACAAATTGTTGAATTCTACCTTATTCTTGCAGCG---------GTA---ACCAAGGTAAGTGCC---AATGTA------------------------------------TTCTGGAAG---TTACTAATTGCTTCTCTTGTTATGCTTGTCGGTGGATATATGGGTGAG---------GCT------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GAAGTT------------------ATGCCCGCA---TTTATAATAGGAATGGCCGGATGGATTTACATAATCTACGAAATC---------------TTT------AAG---GGTGAGGCTTCCCAACTCAATGAGAAC------AGT---GGCAATGCTGCATGC---CAA---CAA---GCA---TTT---AGA---ACCATT---CGGGCAATTGTCACATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TKVSA-NV------------FWK-LLIASLVMLVGGYMGE---A------G--Y-----------M----------------------EV------MPA-FIIGMAGWIYIIYEI-----F--K-GEASQLNEN--S-GNAAC-Q-Q-A-F-R-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes]_KJ928563 [I-Planctomycetes] PRGD_OTU041c_otuREP_e5e94127a00ccf714b6b99f1616a12c4 gb|KJ928563| PRGD_OTU041c_otuREP_e5e94127a00ccf714b6b99f1616a12c4, putative proteorhodopsin gene, partial cds. PRGD_OTU041c_otuREP_e5e94127a00ccf714b6b99f1616a12c4, putative proteorhodopsin gene, partial cds. KJ928563 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.935, 18.508), Indian Ocean (-23.5956, 69.0419) CTTATTACCGTACCGCTACAAATTGTTGAATTCTACCTTATTCTTGCTGCGGTAACCAAGGTAAGTGCCAATGTATTCTGGAAGTTACTAATTGCTTCTCTTGTCATGCTTGTCGGTGGATATATGGGTGAGGCTGGTTACATGGAAGTTATGCCCGCATTTGTAATAGGAATGGCCGGATGGATTTACATAATCTACGAAATCTTTAAGGGTGAGGCTTCCCAACTCAATGAGAACAGTGGCAATGCTGCATGCCAACAAGCATTTAGAACCATACGGGCAATTGTCACATTT LITVPLQIVEFYLILAAVTKVSANVFWKLLIASLVMLVGGYMGEAGYMEVMPAFVIGMAGWIYIIYEIFKGEASQLNENSGNAACQQAFRTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATTACCGTACCGCTACAAATTGTTGAATTCTACCTTATTCTTGCTGCG---------GTA---ACCAAGGTAAGTGCC---AATGTA------------------------------------TTCTGGAAG---TTACTAATTGCTTCTCTTGTCATGCTTGTCGGTGGATATATGGGTGAG---------GCT------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GAAGTT------------------ATGCCCGCA---TTTGTAATAGGAATGGCCGGATGGATTTACATAATCTACGAAATC---------------TTT------AAG---GGTGAGGCTTCCCAACTCAATGAGAAC------AGT---GGCAATGCTGCATGC---CAA---CAA---GCA---TTT---AGA---ACCATA---CGGGCAATTGTCACATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TKVSA-NV------------FWK-LLIASLVMLVGGYMGE---A------G--Y-----------M----------------------EV------MPA-FVIGMAGWIYIIYEI-----F--K-GEASQLNEN--S-GNAAC-Q-Q-A-F-R-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes]_KJ928569 [I-Planctomycetes] PRGD_OTU041c_a865d55a3118b34e9607117ea3908fd2 gb|KJ928569| PRGD_OTU041c_a865d55a3118b34e9607117ea3908fd2, putative proteorhodopsin gene, partial cds. PRGD_OTU041c_a865d55a3118b34e9607117ea3908fd2, putative proteorhodopsin gene, partial cds. KJ928569 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175; 33.935, 18.508), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTTATTACCGTACCGCTACAAATTGTTGAATTCTACCTTATCCTTGCTGCGGTAACTAAGGTTAGTGCCAATGTATTCTGGAAGTTACTAATCGCTTCGCTTGTTATGCTTGTCGGTGGATACATGGGTGAGGCTGGTTACATGGAAGTAATGCCCGCATTTATAATTGGAATGGCCGGATGGATTTACATAATATACGAAATCTTTAAGGGTGAGGCTTCGCAACTCAACGAGAATAGCGGCAATGCTGCTTGCCAACAAGCATTTAGAACCATACGGGCAATCGTCACATTT LITVPLQIVEFYLILAAVTKVSANVFWKLLIASLVMLVGGYMGEAGYMEVMPAFIIGMAGWIYIIYEIFKGEASQLNENSGNAACQQAFRTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATTACCGTACCGCTACAAATTGTTGAATTCTACCTTATCCTTGCTGCG---------GTA---ACTAAGGTTAGTGCC---AATGTA------------------------------------TTCTGGAAG---TTACTAATCGCTTCGCTTGTTATGCTTGTCGGTGGATACATGGGTGAG---------GCT------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GAAGTA------------------ATGCCCGCA---TTTATAATTGGAATGGCCGGATGGATTTACATAATATACGAAATC---------------TTT------AAG---GGTGAGGCTTCGCAACTCAACGAGAAT------AGC---GGCAATGCTGCTTGC---CAA---CAA---GCA---TTT---AGA---ACCATA---CGGGCAATCGTCACATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TKVSA-NV------------FWK-LLIASLVMLVGGYMGE---A------G--Y-----------M----------------------EV------MPA-FIIGMAGWIYIIYEI-----F--K-GEASQLNEN--S-GNAAC-Q-Q-A-F-R-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes]_KJ928568 [I-Planctomycetes] PRGD_OTU041c_9fbd1fc095fd8c09cccea021bb9b56ed gb|KJ928568| PRGD_OTU041c_9fbd1fc095fd8c09cccea021bb9b56ed, putative proteorhodopsin gene, partial cds. PRGD_OTU041c_9fbd1fc095fd8c09cccea021bb9b56ed, putative proteorhodopsin gene, partial cds. KJ928568 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) CTCATAACCGTACCGTTGCAGATCATTGAATTCTACATAATTCTTGCAGCAGTGACGAAAGTTAATGCGAGTGTATTTTGGAAACTACTGATTGCTTCTCTTGTGATGCTTGTCGGAGGTTACATGGGTGAAGCCGGTTACATGGGAGTCATGCCCGCTTTTGTTATAGGCATGGCCGGCTGGGTCTACATCATCTACGAAATTTTCAAAGGCGAAGCTTCACAACTTAACGCAAACAGCGGAAACGCAGCTTGCCAGCAAGCCTTCAAAACTATACGGGCAATCGTCACCTTT LITVPLQIIEFYIILAAVTKVNASVFWKLLIASLVMLVGGYMGEAGYMGVMPAFVIGMAGWVYIIYEIFKGEASQLNANSGNAACQQAFKTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATAACCGTACCGTTGCAGATCATTGAATTCTACATAATTCTTGCAGCA---------GTG---ACGAAAGTTAATGCG---AGTGTA------------------------------------TTTTGGAAA---CTACTGATTGCTTCTCTTGTGATGCTTGTCGGAGGTTACATGGGTGAA---------GCC------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------GGAGTC------------------ATGCCCGCT---TTTGTTATAGGCATGGCCGGCTGGGTCTACATCATCTACGAAATT---------------TTC------AAA---GGCGAAGCTTCACAACTTAACGCAAAC------AGC---GGAAACGCAGCTTGC---CAG---CAA---GCC---TTC---AAA---ACTATA---CGGGCAATCGTCACCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYIILAA---V-TKVNA-SV------------FWK-LLIASLVMLVGGYMGE---A------G--Y-----------M----------------------GV------MPA-FVIGMAGWVYIIYEI-----F--K-GEASQLNAN--S-GNAAC-Q-Q-A-F-K-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes]_KJ929774 [I-Planctomycetes] PRGD_OTU239_otuREP_07c0e052648cbb2927614936af1aa4e2 gb|KJ929774| PRGD_OTU239_otuREP_07c0e052648cbb2927614936af1aa4e2, putative proteorhodopsin gene, partial cds. PRGD_OTU239_otuREP_07c0e052648cbb2927614936af1aa4e2, putative proteorhodopsin gene, partial cds. KJ929774 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) TTCATCACCGTTCCTCTGCAAATTATTGAGTTTTACGTTATCCTTGCTGCGGTAACGGTTGTAAGCGGATCCTTGTTTTGGCGATTACTGGGAGCCTCACTAGTAATGCTAGTTGGTGGCTATTTAGGTGAAGCTGGATACATGTCTGTGGCACCTGCGTTCGTAATCGGACTAGCTGGTTGGGGCTACATAATATGGGAAATCTTCGCGGGCGAGGCCTCCAAGGCAAACGCAAATAGCGGAAATGCAGCAAGCCAGAAAGCTTTTGTAACTATCCGAGCCATTGTCACATTT FITVPLQIIEFYVILAAVTVVSGSLFWRLLGASLVMLVGGYLGEAGYMSVAPAFVIGLAGWGYIIWEIFAGEASKANANSGNAASQKAFVTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCATCACCGTTCCTCTGCAAATTATTGAGTTTTACGTTATCCTTGCTGCG---------GTA---ACGGTTGTAAGCGGA---TCCTTG------------------------------------TTTTGGCGA---TTACTGGGAGCCTCACTAGTAATGCTAGTTGGTGGCTATTTAGGTGAA---------GCT------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------TCTGTG------------------GCACCTGCG---TTCGTAATCGGACTAGCTGGTTGGGGCTACATAATATGGGAAATC---------------TTC------GCG---GGCGAGGCCTCCAAGGCAAACGCAAAT------AGC---GGAAATGCAGCAAGC---CAG---AAA---GCT---TTT---GTA---ACTATC---CGAGCCATTGTCACATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIIEFYVILAA---V-TVVSG-SL------------FWR-LLGASLVMLVGGYLGE---A------G--Y-----------M----------------------SV------APA-FVIGLAGWGYIIWEI-----F--A-GEASKANAN--S-GNAAS-Q-K-A-F-V-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Planctomycetes]_KJ929775 [I-Planctomycetes] PRGD_OTU239_12dadf6c10de1627c34e994250097efa gb|KJ929775| PRGD_OTU239_12dadf6c10de1627c34e994250097efa, putative proteorhodopsin gene, partial cds. PRGD_OTU239_12dadf6c10de1627c34e994250097efa, putative proteorhodopsin gene, partial cds. KJ929775 [[proteorhodopsin super-cluster I/Planctomycetes-like cluster]] proteorhodopsin super-cluster I Planctomycetes-like cluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTCATCACCGTTCCTCTGCAAATTATAGAATTTTACGTTATCCTTGCTGCGGTAACGGTCGTAAGCGGATCCTTGTTTTGGCGATTACTAGGAGCCTCACTTGTGATGCTGGTTGGTGGCTATTTAGGTGAAGCGGGATATATGTCCGTGGCACCTGCGTTCATAATCGGACTAGCTGGTTGGGGCTACATAATTTGGGAAATCTTTGCGGGCGAAGCCTCCAAGGCAAACGCAAATAGCGGAAATGCAGCAAGCCAGAAGGCTTTTGTAACTATCCGAGCCATTGTCACATTT FITVPLQIIEFYVILAAVTVVSGSLFWRLLGASLVMLVGGYLGEAGYMSVAPAFIIGLAGWGYIIWEIFAGEASKANANSGNAASQKAFVTIRAIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCATCACCGTTCCTCTGCAAATTATAGAATTTTACGTTATCCTTGCTGCG---------GTA---ACGGTCGTAAGCGGA---TCCTTG------------------------------------TTTTGGCGA---TTACTAGGAGCCTCACTTGTGATGCTGGTTGGTGGCTATTTAGGTGAA---------GCG------------------GGA------TAT---------------------------------ATG------------------------------------------------------------------TCCGTG------------------GCACCTGCG---TTCATAATCGGACTAGCTGGTTGGGGCTACATAATTTGGGAAATC---------------TTT------GCG---GGCGAAGCCTCCAAGGCAAACGCAAAT------AGC---GGAAATGCAGCAAGC---CAG---AAG---GCT---TTT---GTA---ACTATC---CGAGCCATTGTCACATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIIEFYVILAA---V-TVVSG-SL------------FWR-LLGASLVMLVGGYLGE---A------G--Y-----------M----------------------SV------APA-FIIGLAGWGYIIWEI-----F--A-GEASKANAN--S-GNAAS-Q-K-A-F-V-TI-RAIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927609 [I-Gamma3-HF130_81H07] PRGD_OTU012_d40781bf09bf7ddff32421a15d6fc076 gb|KJ927609| PRGD_OTU012_d40781bf09bf7ddff32421a15d6fc076, putative proteorhodopsin gene, partial cds. PRGD_OTU012_d40781bf09bf7ddff32421a15d6fc076, putative proteorhodopsin gene, partial cds. KJ927609 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Indian Ocean (-33.28, 45.35) CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCTGTAACTGCAATTTCTGCAGCTATTTTCTGGAAGCTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAAACAGGATTAATGAATGTAACAGTTGGTTTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATTTTCTTAGGAGAAACTGCTGCGGCAAACGCTGGAAGTGGAAATGCGGCGAGTCAACAAGCATTCAATACAATCAAATGGATTGTTACTGTT LITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANAGSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATAACAGTGCCACTTCAAATTATTGAATTTTACTTAGTTATCGCAGCT---------GTA---ACTGCAATTTCTGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATCGCATCCATTGTGATGCTAGTTTTCGGATATCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACAGTTGGT---TTTGTAATCGGAATGGTTGCATGGTTGTATATCATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCTGCGGCAAACGCTGGA------AGT---GGAAATGCGGCGAGT---CAA---CAA---GCA---TTC---AAT---ACAATC---AAATGGATTGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927573 [I-Gamma3-HF130_81H07] PRGD_OTU012_2521e860c21fb8d3404dedc14925e5ad gb|KJ927573| PRGD_OTU012_2521e860c21fb8d3404dedc14925e5ad, putative proteorhodopsin gene, partial cds. PRGD_OTU012_2521e860c21fb8d3404dedc14925e5ad, putative proteorhodopsin gene, partial cds. KJ927573 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTCATAACAGTGCCACTTCAAATTATTGAATTTTATTTAGTTATTGCTGCTGTAACTGCAGTAAGCGCTGCTATATTCTGGAGACTTTTAATAGCATCAATCGTGATGTTGGTCTTTGGTTATCTTGGAGAAACTGGATTAATGAATGTAACTGTAGGTTTTGTGATCGGAATGGTTGCTTGGCTTTACATTATTTATGAAATCTTTCTTGGAGAAACAGCTGCAGCTAATGCTTCAAGTGGAAATGCAGCAAGTCAACAAGCGTTTAACACAATCAAATGGATTGTTACTGTT LITVPLQIIEFYLVIAAVTAVSAAIFWRLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANASSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATAACAGTGCCACTTCAAATTATTGAATTTTATTTAGTTATTGCTGCT---------GTA---ACTGCAGTAAGCGCT---GCTATA------------------------------------TTCTGGAGA---CTTTTAATAGCATCAATCGTGATGTTGGTCTTTGGTTATCTTGGAGAA---------ACT------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACTGTAGGT---TTTGTGATCGGAATGGTTGCTTGGCTTTACATTATTTATGAAATC---------------TTT------CTT---GGAGAAACAGCTGCAGCTAATGCTTCA------AGT---GGAAATGCAGCAAGT---CAA---CAA---GCG---TTT---AAC---ACAATC---AAATGGATTGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAVSA-AI------------FWR-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927576 [I-Gamma3-HF130_81H07] PRGD_OTU012_2a547daf1ebec937d40079862d786713 gb|KJ927576| PRGD_OTU012_2a547daf1ebec937d40079862d786713, putative proteorhodopsin gene, partial cds. PRGD_OTU012_2a547daf1ebec937d40079862d786713, putative proteorhodopsin gene, partial cds. KJ927576 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.935 18.508 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTAATAACAGTACCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCAGTAACTGCAATTTCAGCAGCTATATTCTGGAAGCTTTTAATTGCTTCCATAGTGATGCTAGTTTTTGGTTATTTAGGCGAAACGGGATTAATGAATGTCACTGTTGGTTTCGTAATTGGTATGGTCGCTTGGCTATACATAATTTATGAAATTTTCTTTGGAGAAACAGCCGCGGCCAATGCTTCAAGTGGAAACGCTGCTAGTCAACAAGCATTTAACACAATCAAATGGATTGTTACTGTA LITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFFGETAAANASSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTACCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCA---------GTA---ACTGCAATTTCAGCA---GCTATA------------------------------------TTCTGGAAG---CTTTTAATTGCTTCCATAGTGATGCTAGTTTTTGGTTATTTAGGCGAA---------ACG------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTGTTGGT---TTCGTAATTGGTATGGTCGCTTGGCTATACATAATTTATGAAATT---------------TTC------TTT---GGAGAAACAGCCGCGGCCAATGCTTCA------AGT---GGAAACGCTGCTAGT---CAA---CAA---GCA---TTT---AAC---ACAATC---AAATGGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--F-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927577 [I-Gamma3-HF130_81H07] PRGD_OTU012_2e07d275561b85d2849739c47b783965 gb|KJ927577| PRGD_OTU012_2e07d275561b85d2849739c47b783965, putative proteorhodopsin gene, partial cds. PRGD_OTU012_2e07d275561b85d2849739c47b783965, putative proteorhodopsin gene, partial cds. KJ927577 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Mediterranean Sea (33.935, 18.508), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTAATAACAGTGCCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCAGTAACTGCAATTTCAGCAGCTATATTCTGGAAGCTTTTAATAGCTTCAATAGTGATGCTAGTTTTTGGTTATTTTGGCGAAACGGGATTAATGAATGTCACTGTTGGTTTTGTAATTGGTATGGTCGCTTGGCTATATATAATTTATGAAATTTTCTTTGGAGAAACTGCCGCGGCCAACGCTTCAAGTGGAAACGCTGCTAGTCAACAAGCATTTAACACAATCAAGTGGATTGTTACTGTA LITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYFGETGLMNVTVGFVIGMVAWLYIIYEIFFGETAAANASSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTGCCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCA---------GTA---ACTGCAATTTCAGCA---GCTATA------------------------------------TTCTGGAAG---CTTTTAATAGCTTCAATAGTGATGCTAGTTTTTGGTTATTTTGGCGAA---------ACG------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTGTTGGT---TTTGTAATTGGTATGGTCGCTTGGCTATATATAATTTATGAAATT---------------TTC------TTT---GGAGAAACTGCCGCGGCCAACGCTTCA------AGT---GGAAACGCTGCTAGT---CAA---CAA---GCA---TTT---AAC---ACAATC---AAGTGGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYFGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--F-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927615 [I-Gamma3-HF130_81H07] PRGD_OTU012_f12c82f17a8853d6a29ccc7e52038e5c gb|KJ927615| PRGD_OTU012_f12c82f17a8853d6a29ccc7e52038e5c, putative proteorhodopsin gene, partial cds. PRGD_OTU012_f12c82f17a8853d6a29ccc7e52038e5c, putative proteorhodopsin gene, partial cds. KJ927615 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTAATAACAGTGCCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCAGTAACTGCAATTTCAGCAGCTATATTCTGGAAGCTTTTAATAGCTTCAATAGTGATGCTAGTTTTTGGTTATTTAGGCGAAACGGGATTAATGAATGTCACTGTTGGTTTCGTAATTGGTATGGTCGCTTGGCTATACATAATTTATGAAATTTTCTTTGGAGAAACTGCCGCTGCTAACGCTTCAAGTGGGAACGCTGCTAGTCAACAAGCATTTAACACAATCAAGTGGATTGTTACCGTA LITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFFGETAAANASSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTGCCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCA---------GTA---ACTGCAATTTCAGCA---GCTATA------------------------------------TTCTGGAAG---CTTTTAATAGCTTCAATAGTGATGCTAGTTTTTGGTTATTTAGGCGAA---------ACG------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTGTTGGT---TTCGTAATTGGTATGGTCGCTTGGCTATACATAATTTATGAAATT---------------TTC------TTT---GGAGAAACTGCCGCTGCTAACGCTTCA------AGT---GGGAACGCTGCTAGT---CAA---CAA---GCA---TTT---AAC---ACAATC---AAGTGGATTGTTACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--F-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927608 [I-Gamma3-HF130_81H07] PRGD_OTU012_bfdba1f92b6a6f7c60b0fcb17bd180ea gb|KJ927608| PRGD_OTU012_bfdba1f92b6a6f7c60b0fcb17bd180ea, putative proteorhodopsin gene, partial cds. PRGD_OTU012_bfdba1f92b6a6f7c60b0fcb17bd180ea, putative proteorhodopsin gene, partial cds. KJ927608 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTAATAACAGTACCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCAGTAACTGCAATTTCAGCAGCTATATTCTGGAAGCTTTTAATAGCTTCAATAGTGATGCTAGTTTTTGGCTATTTAGGCGAAACGGGATTAATGAATGTCACTGTTGGTTTCGTAATTGGTATGGTCGCTTGGCTATACATAATTTATGAAATTTTCTTTGGAGAAACTGCCGCGGCCAACGCTTCAAGTGGAAACGCTGCTAGTCAACAAGCATTTAACACAATCAAGTGGATTGTTACCGTA LITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFFGETAAANASSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTACCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCA---------GTA---ACTGCAATTTCAGCA---GCTATA------------------------------------TTCTGGAAG---CTTTTAATAGCTTCAATAGTGATGCTAGTTTTTGGCTATTTAGGCGAA---------ACG------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTGTTGGT---TTCGTAATTGGTATGGTCGCTTGGCTATACATAATTTATGAAATT---------------TTC------TTT---GGAGAAACTGCCGCGGCCAACGCTTCA------AGT---GGAAACGCTGCTAGT---CAA---CAA---GCA---TTT---AAC---ACAATC---AAGTGGATTGTTACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--F-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927597 [I-Gamma3-HF130_81H07] PRGD_OTU012_93dfd29772b8d45e7aa9e1d73151a114 gb|KJ927597| PRGD_OTU012_93dfd29772b8d45e7aa9e1d73151a114, putative proteorhodopsin gene, partial cds. PRGD_OTU012_93dfd29772b8d45e7aa9e1d73151a114, putative proteorhodopsin gene, partial cds. KJ927597 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTAATAACAGTACCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCAGTAACTGCAATTTCAGCAGCTATATTCTGGAAGCTTTTAATAGCTTCAATAGTGATGCTAGTTTTTGGTTATTTAGGCGAAACGGGACTAATGAATGTCACTGTTGGTTTCGTAATTGGTATGGTCGCTTGGCTATACATAATTTATGAAATTTTCTTTGGAGAAACAGCCGCGGCCAACGCTTCAAGTGGAAACGCTGCTAGTCAACAAGCATTTAACACAATCAAGTGGATTGTTACCGTA LITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFFGETAAANASSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTACCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCA---------GTA---ACTGCAATTTCAGCA---GCTATA------------------------------------TTCTGGAAG---CTTTTAATAGCTTCAATAGTGATGCTAGTTTTTGGTTATTTAGGCGAA---------ACG------------------GGA------CTA---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTGTTGGT---TTCGTAATTGGTATGGTCGCTTGGCTATACATAATTTATGAAATT---------------TTC------TTT---GGAGAAACAGCCGCGGCCAACGCTTCA------AGT---GGAAACGCTGCTAGT---CAA---CAA---GCA---TTT---AAC---ACAATC---AAGTGGATTGTTACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--F-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927578 [I-Gamma3-HF130_81H07] PRGD_OTU012_30e2e4f01b69998082f1f88263a2daf2 gb|KJ927578| PRGD_OTU012_30e2e4f01b69998082f1f88263a2daf2, putative proteorhodopsin gene, partial cds. PRGD_OTU012_30e2e4f01b69998082f1f88263a2daf2, putative proteorhodopsin gene, partial cds. KJ927578 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATAACAGTACCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCAGTAACTGCAATTTCAGCAGCTATATTCTGGAAGCTTTTAATAGCTTCCATAGTGATGCTAGTTTTTGGTTATTTAGGCGAAACGGGATTAATGAATGTCACTGTTGGTTTCGTAATTGGTATGGTCGCTTGGCTATATATAATTTATGAAATTTTCTTTGGAGAAACTGCCGCGGCCAACGCTTCAAGTGGAAACGCTGCTAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACCGTA LITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFFGETAAANASSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTACCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCA---------GTA---ACTGCAATTTCAGCA---GCTATA------------------------------------TTCTGGAAG---CTTTTAATAGCTTCCATAGTGATGCTAGTTTTTGGTTATTTAGGCGAA---------ACG------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTGTTGGT---TTCGTAATTGGTATGGTCGCTTGGCTATATATAATTTATGAAATT---------------TTC------TTT---GGAGAAACTGCCGCGGCCAACGCTTCA------AGT---GGAAACGCTGCTAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--F-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927596 [I-Gamma3-HF130_81H07] PRGD_OTU012_926324e4d3c5b4062bfc31111e5f47c9 gb|KJ927596| PRGD_OTU012_926324e4d3c5b4062bfc31111e5f47c9, putative proteorhodopsin gene, partial cds. PRGD_OTU012_926324e4d3c5b4062bfc31111e5f47c9, putative proteorhodopsin gene, partial cds. KJ927596 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) TTAATAACAGTACCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCAGTAACTGCAATTTCAGCAGCTATATTCTGGAAGCTTTTAATAGCTTCAATAGTGATGCTGGTTTTTGGTTATTTTGGCGAAACGGGATTAATGAATGTCACTGTTGGTTTCGTAATTGGTATGGTCGCTTGGCTATATATAATTTACGAAATTTTCTTTGGAGAAACTGCCGCGGCAAATGCTTCAAGTGGAAACGCTGCTAGTCAACAAGCATTTAACACAATCAAGTGGATTGTTACCGTA LITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYFGETGLMNVTVGFVIGMVAWLYIIYEIFFGETAAANASSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTACCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCA---------GTA---ACTGCAATTTCAGCA---GCTATA------------------------------------TTCTGGAAG---CTTTTAATAGCTTCAATAGTGATGCTGGTTTTTGGTTATTTTGGCGAA---------ACG------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTGTTGGT---TTCGTAATTGGTATGGTCGCTTGGCTATATATAATTTACGAAATT---------------TTC------TTT---GGAGAAACTGCCGCGGCAAATGCTTCA------AGT---GGAAACGCTGCTAGT---CAA---CAA---GCA---TTT---AAC---ACAATC---AAGTGGATTGTTACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYFGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--F-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927603 [I-Gamma3-HF130_81H07] PRGD_OTU012_9ce634be44fc5e25cbf653bf4d46f852 gb|KJ927603| PRGD_OTU012_9ce634be44fc5e25cbf653bf4d46f852, putative proteorhodopsin gene, partial cds. PRGD_OTU012_9ce634be44fc5e25cbf653bf4d46f852, putative proteorhodopsin gene, partial cds. KJ927603 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTAATAACAGTTCCACTTCAAATAATCGAGTTTTATCTGGTTATTGCTGCAGTAACTGCAATTTCAGCAGCTATATTCTGGAAGCTTTTAATAGCTTCAATAGTGATGCTAGTTTTTGGTTATTTTGGCGAAACGGGATTAATGAATGTCACTGTTGGTTTTGTAATTGGTATGGTCGCCTGGCTATATATAATTTATGAAATTTTCTTTGGAGAAACTGCCGCGGCCAACGCTTCAAGTGGAAACGCTGCTAGTCAACAAGCATTTAATACAATCAAGTGGATTGTTACCGTA LITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYFGETGLMNVTVGFVIGMVAWLYIIYEIFFGETAAANASSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTTCCACTTCAAATAATCGAGTTTTATCTGGTTATTGCTGCA---------GTA---ACTGCAATTTCAGCA---GCTATA------------------------------------TTCTGGAAG---CTTTTAATAGCTTCAATAGTGATGCTAGTTTTTGGTTATTTTGGCGAA---------ACG------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTGTTGGT---TTTGTAATTGGTATGGTCGCCTGGCTATATATAATTTATGAAATT---------------TTC------TTT---GGAGAAACTGCCGCGGCCAACGCTTCA------AGT---GGAAACGCTGCTAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAGTGGATTGTTACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYFGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--F-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927579 [I-Gamma3-HF130_81H07] PRGD_OTU012_31162c3cd38aac18a9b0db441e822951 gb|KJ927579| PRGD_OTU012_31162c3cd38aac18a9b0db441e822951, putative proteorhodopsin gene, partial cds. PRGD_OTU012_31162c3cd38aac18a9b0db441e822951, putative proteorhodopsin gene, partial cds. KJ927579 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTAATAACAGTACCACTTCAAATTATTGAGTTTTACCTAGTTATTGCTGCAGTAACTGCAATTTCGGCAGCTATTTTTTGGAAGCTTTTAACAGCTTCCATAGTGATGCTAGTTTTTGGTTATTTTGGTGAAACTGGATTAATGAATGTCACTGTTGGTTTTGTAATTGGTATGGTCGCTTGGCTATATATAATTTACGAAATTTTCTTTGGAGAAACTGCAGCGGCTAACGCTTCAAGTGGAAATGCTGCTAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACAGTA LITVPLQIIEFYLVIAAVTAISAAIFWKLLTASIVMLVFGYFGETGLMNVTVGFVIGMVAWLYIIYEIFFGETAAANASSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTACCACTTCAAATTATTGAGTTTTACCTAGTTATTGCTGCA---------GTA---ACTGCAATTTCGGCA---GCTATT------------------------------------TTTTGGAAG---CTTTTAACAGCTTCCATAGTGATGCTAGTTTTTGGTTATTTTGGTGAA---------ACT------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTGTTGGT---TTTGTAATTGGTATGGTCGCTTGGCTATATATAATTTACGAAATT---------------TTC------TTT---GGAGAAACTGCAGCGGCTAACGCTTCA------AGT---GGAAATGCTGCTAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLTASIVMLVFGYFGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--F-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927592 [I-Gamma3-HF130_81H07] PRGD_OTU012_7d07f43c1b7ac1e830004a33608d335f gb|KJ927592| PRGD_OTU012_7d07f43c1b7ac1e830004a33608d335f, putative proteorhodopsin gene, partial cds. PRGD_OTU012_7d07f43c1b7ac1e830004a33608d335f, putative proteorhodopsin gene, partial cds. KJ927592 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTAATAACAGTACCACTTCAAATTATTGAGTTTTACCTAGTTATTGCTGCAGTAACTGCAATTTCGGCAGCTATTTTTTGGAAGCTTTTAACAGCTTCCATAGTGATGCTAGTTTTTGGTTATTTTGGTGAAACTGGATTAATGAATGTCACTGTTGGTTTTGTAATTGGTATGGTCGCTTGGCTATATATAATTTATGAAATTTTCTTTGGAGAAACTGCCGCGGCCAACGCTTCAAGTGGAAACGCTGCTAGTCAACAAGCATTTAACACAATCAAGTGGATTGTTACTGTA LITVPLQIIEFYLVIAAVTAISAAIFWKLLTASIVMLVFGYFGETGLMNVTVGFVIGMVAWLYIIYEIFFGETAAANASSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTACCACTTCAAATTATTGAGTTTTACCTAGTTATTGCTGCA---------GTA---ACTGCAATTTCGGCA---GCTATT------------------------------------TTTTGGAAG---CTTTTAACAGCTTCCATAGTGATGCTAGTTTTTGGTTATTTTGGTGAA---------ACT------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTGTTGGT---TTTGTAATTGGTATGGTCGCTTGGCTATATATAATTTATGAAATT---------------TTC------TTT---GGAGAAACTGCCGCGGCCAACGCTTCA------AGT---GGAAACGCTGCTAGT---CAA---CAA---GCA---TTT---AAC---ACAATC---AAGTGGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLTASIVMLVFGYFGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--F-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927581 [I-Gamma3-HF130_81H07] PRGD_OTU012_498dd3df07d84d09cd31a59e80213555 gb|KJ927581| PRGD_OTU012_498dd3df07d84d09cd31a59e80213555, putative proteorhodopsin gene, partial cds. PRGD_OTU012_498dd3df07d84d09cd31a59e80213555, putative proteorhodopsin gene, partial cds. KJ927581 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTAATAACAGTACCACTTCAAATAATTGAGTTTTATCTAGTTATTGCTGCAGTAACTGCAATTTCGGCAGCTATTTTTTGGAAGCTTTTAACAGCTTCCATAGTGATGCTAGTTTTTGGTTATTTTGGTGAAACTGGATTAATGAATGTCACTGTTGGTTTTGTAATTGGTATGGTCGCTTGGCTATATATAATTTATGAGATTTTCTTAGGAGAAACTGCCGCAGCGAACGCCTCGAGCGGAAATGCTGCTAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACTGTA LITVPLQIIEFYLVIAAVTAISAAIFWKLLTASIVMLVFGYFGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANASSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTACCACTTCAAATAATTGAGTTTTATCTAGTTATTGCTGCA---------GTA---ACTGCAATTTCGGCA---GCTATT------------------------------------TTTTGGAAG---CTTTTAACAGCTTCCATAGTGATGCTAGTTTTTGGTTATTTTGGTGAA---------ACT------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTGTTGGT---TTTGTAATTGGTATGGTCGCTTGGCTATATATAATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCCGCAGCGAACGCCTCG------AGC---GGAAATGCTGCTAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLTASIVMLVFGYFGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927589 [I-Gamma3-HF130_81H07] PRGD_OTU012_6d7da6fc1f9e222410382c6f4c37419b gb|KJ927589| PRGD_OTU012_6d7da6fc1f9e222410382c6f4c37419b, putative proteorhodopsin gene, partial cds. PRGD_OTU012_6d7da6fc1f9e222410382c6f4c37419b, putative proteorhodopsin gene, partial cds. KJ927589 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTAATAACAGTACCACTTCAAATAATTGAGTTTTATCTAGTTATTGCTGCAGTAACTGCAATTTCGGCAGCTATTTTTTGGAAGCTTTTAACAGCTTCCATAGTGATGCTAGTTTTTGGTTATTTTGGTGAAACTGGATTAATGAATGTCACTGTTGGTTTTGTAATTGGTATGGTCGCTTGGCTATATATAATTTATGAAATTTTCTTAGGAGAAACTGCCGCAGCTAATGCTTCAAGCGGAAATGCTGCTAGTCAACAAGCATTTAACACAATTAAATGGATTGTTACTGTA LITVPLQIIEFYLVIAAVTAISAAIFWKLLTASIVMLVFGYFGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANASSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTACCACTTCAAATAATTGAGTTTTATCTAGTTATTGCTGCA---------GTA---ACTGCAATTTCGGCA---GCTATT------------------------------------TTTTGGAAG---CTTTTAACAGCTTCCATAGTGATGCTAGTTTTTGGTTATTTTGGTGAA---------ACT------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTGTTGGT---TTTGTAATTGGTATGGTCGCTTGGCTATATATAATTTATGAAATT---------------TTC------TTA---GGAGAAACTGCCGCAGCTAATGCTTCA------AGC---GGAAATGCTGCTAGT---CAA---CAA---GCA---TTT---AAC---ACAATT---AAATGGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLTASIVMLVFGYFGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927563 [I-Gamma3-HF130_81H07] PRGD_OTU012_otuREP_652b02488aa7188437b336672f377946 gb|KJ927563| PRGD_OTU012_otuREP_652b02488aa7188437b336672f377946, putative proteorhodopsin gene, partial cds. PRGD_OTU012_otuREP_652b02488aa7188437b336672f377946, putative proteorhodopsin gene, partial cds. KJ927563 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTAATAACAGTACCACTTCAAATAATTGAGTTTTATCTAGTTATTGCTGCAGTAACTGCAATTTCGGCAGCTATTTTTTGGAAGCTTTTAACAGCTTCCATAGTGATGCTAGTTTTTGGTTATTTTGGTGAAACTGGATTAATGAATGTCACTGTTGGTTTTGTAATTGGTATGGTCGCTTGGCTATATATAATTTACGAAATTTTCTTTGGAGAAACTGCAGCGGCTAACGCTTCAAGTGGAAATGCTGCTAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACCGTA LITVPLQIIEFYLVIAAVTAISAAIFWKLLTASIVMLVFGYFGETGLMNVTVGFVIGMVAWLYIIYEIFFGETAAANASSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTACCACTTCAAATAATTGAGTTTTATCTAGTTATTGCTGCA---------GTA---ACTGCAATTTCGGCA---GCTATT------------------------------------TTTTGGAAG---CTTTTAACAGCTTCCATAGTGATGCTAGTTTTTGGTTATTTTGGTGAA---------ACT------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTGTTGGT---TTTGTAATTGGTATGGTCGCTTGGCTATATATAATTTACGAAATT---------------TTC------TTT---GGAGAAACTGCAGCGGCTAACGCTTCA------AGT---GGAAATGCTGCTAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLTASIVMLVFGYFGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--F-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927570 [I-Gamma3-HF130_81H07] PRGD_OTU012_17ba70b300a299fb51b681f3846c98fe gb|KJ927570| PRGD_OTU012_17ba70b300a299fb51b681f3846c98fe, putative proteorhodopsin gene, partial cds. PRGD_OTU012_17ba70b300a299fb51b681f3846c98fe, putative proteorhodopsin gene, partial cds. KJ927570 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTAATAACAGTACCACTTCAAATAATCGAGTTTTATCTGGTTATTGCTGCAGTAACTGCGATTTCAGCAGCTATTTTCTGGAAGCTTTTAACAGCTTCCATAGTGATGCTAGTTTTTGGTTATTTTGGTGAAACTGGATTAATGAATGTCACTGTTGGTTTTGTAATTGGTATGGTCGCTTGGCTATATATAATTTATGAAATTTTCTTTGGAGAAACTGCCGCAGCTAACGCTTCAAGTGGAAATGCTGCTAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACCGTA LITVPLQIIEFYLVIAAVTAISAAIFWKLLTASIVMLVFGYFGETGLMNVTVGFVIGMVAWLYIIYEIFFGETAAANASSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTACCACTTCAAATAATCGAGTTTTATCTGGTTATTGCTGCA---------GTA---ACTGCGATTTCAGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAACAGCTTCCATAGTGATGCTAGTTTTTGGTTATTTTGGTGAA---------ACT------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTGTTGGT---TTTGTAATTGGTATGGTCGCTTGGCTATATATAATTTATGAAATT---------------TTC------TTT---GGAGAAACTGCCGCAGCTAACGCTTCA------AGT---GGAAATGCTGCTAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLTASIVMLVFGYFGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--F-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927568 [I-Gamma3-HF130_81H07] PRGD_OTU012_109be38752921b4d5c286c07feae7f22 gb|KJ927568| PRGD_OTU012_109be38752921b4d5c286c07feae7f22, putative proteorhodopsin gene, partial cds. PRGD_OTU012_109be38752921b4d5c286c07feae7f22, putative proteorhodopsin gene, partial cds. KJ927568 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTAATTACAGTACCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCAGTAACTGCAATTTCAGCAGCTATATTCTGGAAGCTTCTAACAGCTTCCATAGTGATGCTAGTTTTTGGTTATTTTGGTGAAACGGGATTAATGAATGTCACTGTTGGTTTTGTAATAGGTATGGTCGCTTGGCTATACATAATTTACGAAATTTTCTTTGGAGAAACTGCAGCGGCTAACGCTTCAAGTGGAAATGCTGCTAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACCGTA LITVPLQIIEFYLVIAAVTAISAAIFWKLLTASIVMLVFGYFGETGLMNVTVGFVIGMVAWLYIIYEIFFGETAAANASSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTACCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCA---------GTA---ACTGCAATTTCAGCA---GCTATA------------------------------------TTCTGGAAG---CTTCTAACAGCTTCCATAGTGATGCTAGTTTTTGGTTATTTTGGTGAA---------ACG------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTGTTGGT---TTTGTAATAGGTATGGTCGCTTGGCTATACATAATTTACGAAATT---------------TTC------TTT---GGAGAAACTGCAGCGGCTAACGCTTCA------AGT---GGAAATGCTGCTAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLTASIVMLVFGYFGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--F-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927605 [I-Gamma3-HF130_81H07] PRGD_OTU012_a3d3064bde5a63b0bdd832a683e98c5a gb|KJ927605| PRGD_OTU012_a3d3064bde5a63b0bdd832a683e98c5a, putative proteorhodopsin gene, partial cds. PRGD_OTU012_a3d3064bde5a63b0bdd832a683e98c5a, putative proteorhodopsin gene, partial cds. KJ927605 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATAACAGTGCCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCAGTAACTGCAATTTCAGCAGCTATATTCTGGAAGCTTTTAATAGCTTCAATAGTGATGCTAGTTTTTGGTTATTTTGGCGAAACGGGATTAATGAATGTCACTGTTGGTTTTGTAATTGGTATGGTCGCTTGGCTATATATAATTTACGAAATTTTCTTTGGAGAAACTGCAGCGGCTAACGCTTCAAGTGGAAATGCTGCTAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACCGTA LITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYFGETGLMNVTVGFVIGMVAWLYIIYEIFFGETAAANASSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTGCCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCA---------GTA---ACTGCAATTTCAGCA---GCTATA------------------------------------TTCTGGAAG---CTTTTAATAGCTTCAATAGTGATGCTAGTTTTTGGTTATTTTGGCGAA---------ACG------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTGTTGGT---TTTGTAATTGGTATGGTCGCTTGGCTATATATAATTTACGAAATT---------------TTC------TTT---GGAGAAACTGCAGCGGCTAACGCTTCA------AGT---GGAAATGCTGCTAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYFGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--F-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927586 [I-Gamma3-HF130_81H07] PRGD_OTU012_6061d9fede7e7a52fd195f6669afd3b0 gb|KJ927586| PRGD_OTU012_6061d9fede7e7a52fd195f6669afd3b0, putative proteorhodopsin gene, partial cds. PRGD_OTU012_6061d9fede7e7a52fd195f6669afd3b0, putative proteorhodopsin gene, partial cds. KJ927586 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTAATAACAGTTCCACTTCAAATAATCGAGTTTTATCTGGTTATTGCTGCAGTAACTGCAATTTCAGCAGCTATATTCTGGAAGCTTTTAATAGCTTCAATAGTGATGCTAGTTTTTGGTTATTTTGGCGAAACGGGATTAATGAATGTCACTGTTGGTTTTGTAATTGGTATGGTCGCCTGGCTATATATAATTTACGAAATTTTCTTTGGAGAAACTGCAGCGGCTAACGCTTCAAGTGGAAATGCTGCTAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACCGTA LITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYFGETGLMNVTVGFVIGMVAWLYIIYEIFFGETAAANASSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTTCCACTTCAAATAATCGAGTTTTATCTGGTTATTGCTGCA---------GTA---ACTGCAATTTCAGCA---GCTATA------------------------------------TTCTGGAAG---CTTTTAATAGCTTCAATAGTGATGCTAGTTTTTGGTTATTTTGGCGAA---------ACG------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTGTTGGT---TTTGTAATTGGTATGGTCGCCTGGCTATATATAATTTACGAAATT---------------TTC------TTT---GGAGAAACTGCAGCGGCTAACGCTTCA------AGT---GGAAATGCTGCTAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYFGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--F-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927574 [I-Gamma3-HF130_81H07] PRGD_OTU012_26259d99cd9c20badb8258ab6a476b02 gb|KJ927574| PRGD_OTU012_26259d99cd9c20badb8258ab6a476b02, putative proteorhodopsin gene, partial cds. PRGD_OTU012_26259d99cd9c20badb8258ab6a476b02, putative proteorhodopsin gene, partial cds. KJ927574 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Mediterranean Sea (33.762, 29.175) TTAATAACAGTACCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCAGTAACTGCAATTTCAGCAGCTATATTCTGGAAGCTTTTAATAGCTTCAATAGTGATGCTAGTTTTTGGTTATTTAGGCGAAACGGGATTAATGAATGTCACTGTTGGTTTCGTAATTGGTATGGTCGCTTGGCTATATATAATTTACGAAATTTTCTTTGGAGAAACTGCAGCGGCTAACGCTTCAAGTGGAAATGCTGCTAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACCGTT LITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYLGETGLMNVTVGFVIGMVAWLYIIYEIFFGETAAANASSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTACCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCA---------GTA---ACTGCAATTTCAGCA---GCTATA------------------------------------TTCTGGAAG---CTTTTAATAGCTTCAATAGTGATGCTAGTTTTTGGTTATTTAGGCGAA---------ACG------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTGTTGGT---TTCGTAATTGGTATGGTCGCTTGGCTATATATAATTTACGAAATT---------------TTC------TTT---GGAGAAACTGCAGCGGCTAACGCTTCA------AGT---GGAAATGCTGCTAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYLGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--F-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927582 [I-Gamma3-HF130_81H07] PRGD_OTU012_4a3b6276d7aeca3a82c15de8e214895e gb|KJ927582| PRGD_OTU012_4a3b6276d7aeca3a82c15de8e214895e, putative proteorhodopsin gene, partial cds. PRGD_OTU012_4a3b6276d7aeca3a82c15de8e214895e, putative proteorhodopsin gene, partial cds. KJ927582 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) TTAATAACAGTACCACTTCAAATAATCGAGTTTTATCTGGTTATTGCTGCAGTAACTGCGATTTCAGCAGCTATTTTCTGGAAGCTTTTAATAGCTTCAATAGTGATGCTAGTTTTTGGTTATTTTGGCGAAACGGGATTAATGAATGTCACTGTTGGTTTCGTAATTGGTATGGTCGCTTGGCTTTATATAATTTATGAAATTTTCTTTGGAGAAACTGCTGCGGCCAACGCTTCAAGTGGAAATGCCGCTAGTCAACAAGCATTTAACACAATCAAATGGATTGTTACCGTA LITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYFGETGLMNVTVGFVIGMVAWLYIIYEIFFGETAAANASSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTACCACTTCAAATAATCGAGTTTTATCTGGTTATTGCTGCA---------GTA---ACTGCGATTTCAGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAATAGCTTCAATAGTGATGCTAGTTTTTGGTTATTTTGGCGAA---------ACG------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTGTTGGT---TTCGTAATTGGTATGGTCGCTTGGCTTTATATAATTTATGAAATT---------------TTC------TTT---GGAGAAACTGCTGCGGCCAACGCTTCA------AGT---GGAAATGCCGCTAGT---CAA---CAA---GCA---TTT---AAC---ACAATC---AAATGGATTGTTACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYFGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--F-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927594 [I-Gamma3-HF130_81H07] PRGD_OTU012_8e7b0bcf2b88de75af88f1106f9e1b75 gb|KJ927594| PRGD_OTU012_8e7b0bcf2b88de75af88f1106f9e1b75, putative proteorhodopsin gene, partial cds. PRGD_OTU012_8e7b0bcf2b88de75af88f1106f9e1b75, putative proteorhodopsin gene, partial cds. KJ927594 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Mediterranean Sea (33.935, 18.508), Indian Ocean (-23.5956, 69.0419) TTAATAACAGTACCACTTCAAATAATCGAGTTTTATCTGGTTATTGCTGCAGTAACTGCGATTTCAGCAGCTATTTTTTGGAAGCTTTTAATAGCTTCAATAGTGATGCTAGTATTTGGTTATTTTGGAGAAACGGGATTAATGAATGTCACTGTTGGTTTCGTAATTGGTATGGTCGCTTGGCTATATATAATTTATGAAATTTTCTTTGGAGAAACTGCCGCGGCCAACGCTTCAAGTGGAAATGCTGCTAGTCAACAAGCATTTAACACAATCAAATGGATTGTTACCGTA LITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYFGETGLMNVTVGFVIGMVAWLYIIYEIFFGETAAANASSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTACCACTTCAAATAATCGAGTTTTATCTGGTTATTGCTGCA---------GTA---ACTGCGATTTCAGCA---GCTATT------------------------------------TTTTGGAAG---CTTTTAATAGCTTCAATAGTGATGCTAGTATTTGGTTATTTTGGAGAA---------ACG------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTGTTGGT---TTCGTAATTGGTATGGTCGCTTGGCTATATATAATTTATGAAATT---------------TTC------TTT---GGAGAAACTGCCGCGGCCAACGCTTCA------AGT---GGAAATGCTGCTAGT---CAA---CAA---GCA---TTT---AAC---ACAATC---AAATGGATTGTTACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYFGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--F-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927602 [I-Gamma3-HF130_81H07] PRGD_OTU012_9ca81297d94bc143e6d0892b9b4a8f7d gb|KJ927602| PRGD_OTU012_9ca81297d94bc143e6d0892b9b4a8f7d, putative proteorhodopsin gene, partial cds. PRGD_OTU012_9ca81297d94bc143e6d0892b9b4a8f7d, putative proteorhodopsin gene, partial cds. KJ927602 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-23.5956, 69.0419) TTAATAACAGTACCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCAGTAACTGCAATTTCAGCAGCTATTTTCTGGAAGCTTCTAACAGCTTCCATAGTGATGCTAGTTTTTGGTTATTTTGGCGAAACGGGATTAATGAATGTCACTGTTGGTTTTGTAATAGGTATGGTCGCTTGGCTATATATAATTTATGAAATTTTCTTTGGAGAAACTGCCGCGGCCAACGCTTCAAGTGGAAACGCTGCTAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACCGTA LITVPLQIIEFYLVIAAVTAISAAIFWKLLTASIVMLVFGYFGETGLMNVTVGFVIGMVAWLYIIYEIFFGETAAANASSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTACCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCA---------GTA---ACTGCAATTTCAGCA---GCTATT------------------------------------TTCTGGAAG---CTTCTAACAGCTTCCATAGTGATGCTAGTTTTTGGTTATTTTGGCGAA---------ACG------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTGTTGGT---TTTGTAATAGGTATGGTCGCTTGGCTATATATAATTTATGAAATT---------------TTC------TTT---GGAGAAACTGCCGCGGCCAACGCTTCA------AGT---GGAAACGCTGCTAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLTASIVMLVFGYFGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--F-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927566 [I-Gamma3-HF130_81H07] PRGD_OTU012_0a51ec5866176f7bcd0d25947eff3307 gb|KJ927566| PRGD_OTU012_0a51ec5866176f7bcd0d25947eff3307, putative proteorhodopsin gene, partial cds. PRGD_OTU012_0a51ec5866176f7bcd0d25947eff3307, putative proteorhodopsin gene, partial cds. KJ927566 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) TTAATTACAGTACCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCAGTAACTGCAATTTCAGCAGCTATATTCTGGAAGCTTCTAACAGCTTCCATAGTGATGCTAGTTTTTGGTTATTTTGGTGAAACGGGATTAATGAATGTCACTGTTGGTTTTGTAATAGGTATGGTCGCTTGGCTATACATAATTTATGAAATTTTCTTAGGAGAAACTGCCGCAGCTAATGCTTCAAGCGGAAATGCTGCTAGTCAACAAGCATTTAACACAATTAAATGGATTGTTACTGTA LITVPLQIIEFYLVIAAVTAISAAIFWKLLTASIVMLVFGYFGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANASSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTACCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCA---------GTA---ACTGCAATTTCAGCA---GCTATA------------------------------------TTCTGGAAG---CTTCTAACAGCTTCCATAGTGATGCTAGTTTTTGGTTATTTTGGTGAA---------ACG------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTGTTGGT---TTTGTAATAGGTATGGTCGCTTGGCTATACATAATTTATGAAATT---------------TTC------TTA---GGAGAAACTGCCGCAGCTAATGCTTCA------AGC---GGAAATGCTGCTAGT---CAA---CAA---GCA---TTT---AAC---ACAATT---AAATGGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLTASIVMLVFGYFGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927585 [I-Gamma3-HF130_81H07] PRGD_OTU012_596b40ffaa1c0b3f3c262bac5b2d6176 gb|KJ927585| PRGD_OTU012_596b40ffaa1c0b3f3c262bac5b2d6176, putative proteorhodopsin gene, partial cds. PRGD_OTU012_596b40ffaa1c0b3f3c262bac5b2d6176, putative proteorhodopsin gene, partial cds. KJ927585 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-33.28, 45.35) TTAATAACAGTACCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCAGTAACTGCAATTTCAGCAGCTATTTTCTGGAAGCTTCTAACAGCTTCCATAGTGATGCTAGTTTTTGGTTATTTTGGCGAAACGGGATTAATGAATGTCACTGTTGGTTTTATAATAGGTATGGTCGCTTGGCTATACATAATTTATGAAATTTTCTTAGGAGAAACTGCCGCAGCTAATGCTTCAAGCGGAAATGCTGCTAGTCAACAAGCATTTAACACAATTAAATGGATTGTTACTGTA LITVPLQIIEFYLVIAAVTAISAAIFWKLLTASIVMLVFGYFGETGLMNVTVGFIIGMVAWLYIIYEIFLGETAAANASSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTACCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCA---------GTA---ACTGCAATTTCAGCA---GCTATT------------------------------------TTCTGGAAG---CTTCTAACAGCTTCCATAGTGATGCTAGTTTTTGGTTATTTTGGCGAA---------ACG------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTGTTGGT---TTTATAATAGGTATGGTCGCTTGGCTATACATAATTTATGAAATT---------------TTC------TTA---GGAGAAACTGCCGCAGCTAATGCTTCA------AGC---GGAAATGCTGCTAGT---CAA---CAA---GCA---TTT---AAC---ACAATT---AAATGGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLTASIVMLVFGYFGE---T------G--L-----------M----------------------NV------TVG-FIIGMVAWLYIIYEI-----F--L-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927572 [I-Gamma3-HF130_81H07] PRGD_OTU012_243d7378e5b81abc07343c5fc6739aba gb|KJ927572| PRGD_OTU012_243d7378e5b81abc07343c5fc6739aba, putative proteorhodopsin gene, partial cds. PRGD_OTU012_243d7378e5b81abc07343c5fc6739aba, putative proteorhodopsin gene, partial cds. KJ927572 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATAACAGTTCCACTTCAAATAATCGAGTTTTATCTGGTTATTGCTGCAGTAACTGCAATTTCAGCAGCTATATTCTGGAAGCTTTTAATAGCTTCAATAGTGATGCTAGTTTTTGGTTATTTTGGCGAAACGGGATTAATGAATGTCACTGTTGGTTTTGTAATTGGTATGGTCGCCTGGCTATATATAATTTATGAAATTTTCTTAGGAGAAACTGCCGCAGCTAATGCTTCAAGCGGAAATGCTGCTAGTCAACAAGCATTTAACACAATTAAATGGATTGTTACTGTA LITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYFGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANASSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTTCCACTTCAAATAATCGAGTTTTATCTGGTTATTGCTGCA---------GTA---ACTGCAATTTCAGCA---GCTATA------------------------------------TTCTGGAAG---CTTTTAATAGCTTCAATAGTGATGCTAGTTTTTGGTTATTTTGGCGAA---------ACG------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTGTTGGT---TTTGTAATTGGTATGGTCGCCTGGCTATATATAATTTATGAAATT---------------TTC------TTA---GGAGAAACTGCCGCAGCTAATGCTTCA------AGC---GGAAATGCTGCTAGT---CAA---CAA---GCA---TTT---AAC---ACAATT---AAATGGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYFGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927595 [I-Gamma3-HF130_81H07] PRGD_OTU012_900d82dc4529236bed04c39954090a4a gb|KJ927595| PRGD_OTU012_900d82dc4529236bed04c39954090a4a, putative proteorhodopsin gene, partial cds. PRGD_OTU012_900d82dc4529236bed04c39954090a4a, putative proteorhodopsin gene, partial cds. KJ927595 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATAACAGTGCCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCAGTAACTGCAATTTCAGCAGCTATATTCTGGAAGCTTTTAATAGCTTCAATAGTGATGCTAGTTTTTGGTTATTTTGGCGAAACGGGATTAATGAATGTCACTGTTGGTTTTGTAATTGGTATGGTCGCTTGGCTATATATAATTTATGAAATTTTCTTAGGAGAAACTGCCGCAGCTAATGCTTCAAGCGGAAATGCTGCTAGTCAACAAGCATTTAACACAATTAAATGGATTGTTACTGTA LITVPLQIIEFYLVIAAVTAISAAIFWKLLIASIVMLVFGYFGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANASSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTGCCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCA---------GTA---ACTGCAATTTCAGCA---GCTATA------------------------------------TTCTGGAAG---CTTTTAATAGCTTCAATAGTGATGCTAGTTTTTGGTTATTTTGGCGAA---------ACG------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTGTTGGT---TTTGTAATTGGTATGGTCGCTTGGCTATATATAATTTATGAAATT---------------TTC------TTA---GGAGAAACTGCCGCAGCTAATGCTTCA------AGC---GGAAATGCTGCTAGT---CAA---CAA---GCA---TTT---AAC---ACAATT---AAATGGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLIASIVMLVFGYFGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927598 [I-Gamma3-HF130_81H07] PRGD_OTU012_9531405f57f9f17199bde415d51dda9a gb|KJ927598| PRGD_OTU012_9531405f57f9f17199bde415d51dda9a, putative proteorhodopsin gene, partial cds. PRGD_OTU012_9531405f57f9f17199bde415d51dda9a, putative proteorhodopsin gene, partial cds. KJ927598 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) TTAATAACAGTACCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCAGTAACCGCAATTTCGGCAGCTATTTTCTGGAAGCTTTTAACAGCTTCCATAGTGATGCTAGTTTTTGGTTATTTTGGCGAAACGGGATTAATGAATGTCACTGTTGGTTTTGTAATTGGTATGGTCGCTTGGCTTTACATAATTTATGAAATTTTCCTTGGAGAAACTGCCGCAGCCAACGCTTCAAGTGGAAATGCTGCTAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACTGTA LITVPLQIIEFYLVIAAVTAISAAIFWKLLTASIVMLVFGYFGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANASSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTACCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCA---------GTA---ACCGCAATTTCGGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAACAGCTTCCATAGTGATGCTAGTTTTTGGTTATTTTGGCGAA---------ACG------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTGTTGGT---TTTGTAATTGGTATGGTCGCTTGGCTTTACATAATTTATGAAATT---------------TTC------CTT---GGAGAAACTGCCGCAGCCAACGCTTCA------AGT---GGAAATGCTGCTAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLTASIVMLVFGYFGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927607 [I-Gamma3-HF130_81H07] PRGD_OTU012_b4ab5505e3614e858176b02fb0fe4e27 gb|KJ927607| PRGD_OTU012_b4ab5505e3614e858176b02fb0fe4e27, putative proteorhodopsin gene, partial cds. PRGD_OTU012_b4ab5505e3614e858176b02fb0fe4e27, putative proteorhodopsin gene, partial cds. KJ927607 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) TTAATAACAGTACCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCAGTAACTGCAATTTCGGCAGCTATTTTCTGGAAGCTTTTAACAGCTTCGATAGTGATGCTAGTTTTTGGTTATTTTGGCGAAACGGGATTAATGAATGTCACTGTTGGTTTTGTAATTGGTATGGTCGCTTGGCTTTACATAATTTATGAAATTTTCCTTGGAGAAACTGCCGCAGCCAATGCTTCAAGTGGAAATGCTGCTAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACTGTA LITVPLQIIEFYLVIAAVTAISAAIFWKLLTASIVMLVFGYFGETGLMNVTVGFVIGMVAWLYIIYEIFLGETAAANASSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTACCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCA---------GTA---ACTGCAATTTCGGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAACAGCTTCGATAGTGATGCTAGTTTTTGGTTATTTTGGCGAA---------ACG------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTGTTGGT---TTTGTAATTGGTATGGTCGCTTGGCTTTACATAATTTATGAAATT---------------TTC------CTT---GGAGAAACTGCCGCAGCCAATGCTTCA------AGT---GGAAATGCTGCTAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLTASIVMLVFGYFGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--L-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927611 [I-Gamma3-HF130_81H07] PRGD_OTU012_e5268b71979cf5b1aa053edad0ad8a4d gb|KJ927611| PRGD_OTU012_e5268b71979cf5b1aa053edad0ad8a4d, putative proteorhodopsin gene, partial cds. PRGD_OTU012_e5268b71979cf5b1aa053edad0ad8a4d, putative proteorhodopsin gene, partial cds. KJ927611 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTAATAACTGTTCCACTTCAAATAATCGAGTTTTATCTTGTTATTGCTGCAGTAACTGCAATTTCGGCAGCTATTTTCTGGAAGCTTCTAACAGCTTCCATAGTGATGCTAGTTTTTGGTTATTTTGGCGAAACGGGATTAATGAATGTCACTGTTGGTTTTGTAATAGGTATGGTCGCTTGGCTTTACATAATTTATGAAATTTTCTTTGGAGAAACTGCTGCAGCCAACGCTTCAAGTGGAAATGCTGCTAGTCAACAAGCATTTAATACAATCAAATGGATTGTAACTGTA LITVPLQIIEFYLVIAAVTAISAAIFWKLLTASIVMLVFGYFGETGLMNVTVGFVIGMVAWLYIIYEIFFGETAAANASSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACTGTTCCACTTCAAATAATCGAGTTTTATCTTGTTATTGCTGCA---------GTA---ACTGCAATTTCGGCA---GCTATT------------------------------------TTCTGGAAG---CTTCTAACAGCTTCCATAGTGATGCTAGTTTTTGGTTATTTTGGCGAA---------ACG------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTGTTGGT---TTTGTAATAGGTATGGTCGCTTGGCTTTACATAATTTATGAAATT---------------TTC------TTT---GGAGAAACTGCTGCAGCCAACGCTTCA------AGT---GGAAATGCTGCTAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLTASIVMLVFGYFGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--F-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927564 [I-Gamma3-HF130_81H07] PRGD_OTU012_0271e5afd57cca208192f6d7bf02e639 gb|KJ927564| PRGD_OTU012_0271e5afd57cca208192f6d7bf02e639, putative proteorhodopsin gene, partial cds. PRGD_OTU012_0271e5afd57cca208192f6d7bf02e639, putative proteorhodopsin gene, partial cds. KJ927564 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTGATAACAGTACCACTACAAATAATCGAGTTTTATCTAGTTATTGCTGCAGTAACTGCAATTTCGGCAGCTATTTTCTGGAAGCTTTTAACAGCTTCCATAGTGATGCTAGTTTTTGGTTATTTCGGCGAAACAGGATTAATGAATGTCACTGTTGGTTTCGTAATTGGTATGGTCGCTTGGCTATACATAATTTATGAAATTTTCTTTGGAGAAACTGCCGCAGCCAACGCTTCAAGTGGAAACGCTGCTAGTCAACAAGCATTTAACACAATCAAATGGATTGTTACTGTA LITVPLQIIEFYLVIAAVTAISAAIFWKLLTASIVMLVFGYFGETGLMNVTVGFVIGMVAWLYIIYEIFFGETAAANASSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACAGTACCACTACAAATAATCGAGTTTTATCTAGTTATTGCTGCA---------GTA---ACTGCAATTTCGGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAACAGCTTCCATAGTGATGCTAGTTTTTGGTTATTTCGGCGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTGTTGGT---TTCGTAATTGGTATGGTCGCTTGGCTATACATAATTTATGAAATT---------------TTC------TTT---GGAGAAACTGCCGCAGCCAACGCTTCA------AGT---GGAAACGCTGCTAGT---CAA---CAA---GCA---TTT---AAC---ACAATC---AAATGGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLTASIVMLVFGYFGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--F-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927593 [I-Gamma3-HF130_81H07] PRGD_OTU012_85743ffe5fd163f23cc8135c32dfd028 gb|KJ927593| PRGD_OTU012_85743ffe5fd163f23cc8135c32dfd028, putative proteorhodopsin gene, partial cds. PRGD_OTU012_85743ffe5fd163f23cc8135c32dfd028, putative proteorhodopsin gene, partial cds. KJ927593 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATAACAGTACCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCAGTAACTGCAATTTCAGCAGCTATTTTCTGGAAGCTTTTAACAGCTTCCATAGTGATGCTAGTTTTTGGTTATTTTGGAGAAACGGGATTAATGAATGTCACTGTTGGTTTTGTAATTGGTATGGTCGCTTGGCTTTACATAATTTACGAAATTTTCTTTGGAGAAACTGCCGCAGCCAACGCTTCAAGTGGAAATGCTGCTAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACTGTA LITVPLQIIEFYLVIAAVTAISAAIFWKLLTASIVMLVFGYFGETGLMNVTVGFVIGMVAWLYIIYEIFFGETAAANASSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTACCACTTCAAATAATCGAGTTTTATCTAGTTATTGCTGCA---------GTA---ACTGCAATTTCAGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAACAGCTTCCATAGTGATGCTAGTTTTTGGTTATTTTGGAGAA---------ACG------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------AATGTC------------------ACTGTTGGT---TTTGTAATTGGTATGGTCGCTTGGCTTTACATAATTTACGAAATT---------------TTC------TTT---GGAGAAACTGCCGCAGCCAACGCTTCA------AGT---GGAAATGCTGCTAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLTASIVMLVFGYFGE---T------G--L-----------M----------------------NV------TVG-FVIGMVAWLYIIYEI-----F--F-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927612 [I-Gamma3-HF130_81H07] PRGD_OTU012_e6573820561701de975e09a0de98c621 gb|KJ927612| PRGD_OTU012_e6573820561701de975e09a0de98c621, putative proteorhodopsin gene, partial cds. PRGD_OTU012_e6573820561701de975e09a0de98c621, putative proteorhodopsin gene, partial cds. KJ927612 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTAATAACAGTACCACTTCAAATAATCGAATTTTATTTAGTTATTGCTGCAGTAACTGCTATTTCAGCAGTTATTTTCTGGAAGCTTTTAATAGCTTCTATAATAATGCTAGTTTTTGGATACTTCGGAGAAACTGGACTTATGAATGTGACCGTTGGCTTTATAATTGGTATGGTCGCTTGGCTATATATAATTTATGAGATTTTCTTAGGAGAAACTGCCGCAGCGAACGCCTCGAGCGGAAATGCTGCTAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACTGTA LITVPLQIIEFYLVIAAVTAISAVIFWKLLIASIIMLVFGYFGETGLMNVTVGFIIGMVAWLYIIYEIFLGETAAANASSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTACCACTTCAAATAATCGAATTTTATTTAGTTATTGCTGCA---------GTA---ACTGCTATTTCAGCA---GTTATT------------------------------------TTCTGGAAG---CTTTTAATAGCTTCTATAATAATGCTAGTTTTTGGATACTTCGGAGAA---------ACT------------------GGA------CTT---------------------------------ATG------------------------------------------------------------------AATGTG------------------ACCGTTGGC---TTTATAATTGGTATGGTCGCTTGGCTATATATAATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCCGCAGCGAACGCCTCG------AGC---GGAAATGCTGCTAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-VI------------FWK-LLIASIIMLVFGYFGE---T------G--L-----------M----------------------NV------TVG-FIIGMVAWLYIIYEI-----F--L-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927613 [I-Gamma3-HF130_81H07] PRGD_OTU012_ebc02917ac6098a5d8a5b247f59525c7 gb|KJ927613| PRGD_OTU012_ebc02917ac6098a5d8a5b247f59525c7, putative proteorhodopsin gene, partial cds. PRGD_OTU012_ebc02917ac6098a5d8a5b247f59525c7, putative proteorhodopsin gene, partial cds. KJ927613 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637; -33.9602, -73.3769), Arctic Ocean-Pacific side (72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTAATAACAGTACCACTTCAAATAATCGAATTTTATTTAGTTATTGCTGCAGTAACTGCTATTTCAGCAGTTATTTTCTGGAAGCTTTTAATAGCTTCTATAGTAATGTTAGTTTTTGGATACTTCGGAGAAACTGGACTTATGAATGTGACCGTTGGTTTCATAATTGGTATGGTCGCTTGGCTATACATAATTTATGAGATTTTCTTAGGAGAAACTGCCGCAGCGAACGCCTCGAGCGGAAATGCTGCTAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACTGTA LITVPLQIIEFYLVIAAVTAISAVIFWKLLIASIVMLVFGYFGETGLMNVTVGFIIGMVAWLYIIYEIFLGETAAANASSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTACCACTTCAAATAATCGAATTTTATTTAGTTATTGCTGCA---------GTA---ACTGCTATTTCAGCA---GTTATT------------------------------------TTCTGGAAG---CTTTTAATAGCTTCTATAGTAATGTTAGTTTTTGGATACTTCGGAGAA---------ACT------------------GGA------CTT---------------------------------ATG------------------------------------------------------------------AATGTG------------------ACCGTTGGT---TTCATAATTGGTATGGTCGCTTGGCTATACATAATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCCGCAGCGAACGCCTCG------AGC---GGAAATGCTGCTAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-VI------------FWK-LLIASIVMLVFGYFGE---T------G--L-----------M----------------------NV------TVG-FIIGMVAWLYIIYEI-----F--L-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927590 [I-Gamma3-HF130_81H07] PRGD_OTU012_6e9a7c61897da3cbbf4452715b6bd929 gb|KJ927590| PRGD_OTU012_6e9a7c61897da3cbbf4452715b6bd929, putative proteorhodopsin gene, partial cds. PRGD_OTU012_6e9a7c61897da3cbbf4452715b6bd929, putative proteorhodopsin gene, partial cds. KJ927590 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTAATAACAGTACCACTTCAAATAATCGAATTTTATTTAGTTATTGCTGCGGTAACTGCTATTTCAGCAGTTATTTTCTGGAAGCTTTTAATAGCTTCTATAGTAATGCTAGTTTTTGGATACTTCGGAGAAACTGGACTTATGAATGTGACCGTTGGTTTTATAATTGGTATGGTCGCTTGGCTATACATAATTTATGAGATTTTCTTAGGAGAAACTGCAGCAGCGAACGCCTCGAGCGGAAATGCTGCTAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACTGTA LITVPLQIIEFYLVIAAVTAISAVIFWKLLIASIVMLVFGYFGETGLMNVTVGFIIGMVAWLYIIYEIFLGETAAANASSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTACCACTTCAAATAATCGAATTTTATTTAGTTATTGCTGCG---------GTA---ACTGCTATTTCAGCA---GTTATT------------------------------------TTCTGGAAG---CTTTTAATAGCTTCTATAGTAATGCTAGTTTTTGGATACTTCGGAGAA---------ACT------------------GGA------CTT---------------------------------ATG------------------------------------------------------------------AATGTG------------------ACCGTTGGT---TTTATAATTGGTATGGTCGCTTGGCTATACATAATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCAGCAGCGAACGCCTCG------AGC---GGAAATGCTGCTAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-VI------------FWK-LLIASIVMLVFGYFGE---T------G--L-----------M----------------------NV------TVG-FIIGMVAWLYIIYEI-----F--L-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927591 [I-Gamma3-HF130_81H07] PRGD_OTU012_74628540cd712947e67f60ec35652852 gb|KJ927591| PRGD_OTU012_74628540cd712947e67f60ec35652852, putative proteorhodopsin gene, partial cds. PRGD_OTU012_74628540cd712947e67f60ec35652852, putative proteorhodopsin gene, partial cds. KJ927591 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTAATAACAGTACCACTTCAAATAATAGAATTTTATTTAGTTATTGCTGCAGTAACTGCTATTTCAGCAGTTATTTTCTGGAAGCTTTTAATAGCTTCTATAGTAATGCTAGTTTTTGGATATTTCGGAGAAACTGGACTTATGAATGTGACCGTTGGTTTTATAATTGGTATGGTCGCTTGGCTATACATTATTTATGAGATTTTCTTAGGAGAAACTGCCGCAGCGAACGCCTCGAGCGGTAATGCTGCCAGTCAGCAAGCATTTAATACAATCAAATGGATTGTTACTGTG LITVPLQIIEFYLVIAAVTAISAVIFWKLLIASIVMLVFGYFGETGLMNVTVGFIIGMVAWLYIIYEIFLGETAAANASSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTACCACTTCAAATAATAGAATTTTATTTAGTTATTGCTGCA---------GTA---ACTGCTATTTCAGCA---GTTATT------------------------------------TTCTGGAAG---CTTTTAATAGCTTCTATAGTAATGCTAGTTTTTGGATATTTCGGAGAA---------ACT------------------GGA------CTT---------------------------------ATG------------------------------------------------------------------AATGTG------------------ACCGTTGGT---TTTATAATTGGTATGGTCGCTTGGCTATACATTATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCCGCAGCGAACGCCTCG------AGC---GGTAATGCTGCCAGT---CAG---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-VI------------FWK-LLIASIVMLVFGYFGE---T------G--L-----------M----------------------NV------TVG-FIIGMVAWLYIIYEI-----F--L-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927610 [I-Gamma3-HF130_81H07] PRGD_OTU012_d899f25384175095554673e297410b30 gb|KJ927610| PRGD_OTU012_d899f25384175095554673e297410b30, putative proteorhodopsin gene, partial cds. PRGD_OTU012_d899f25384175095554673e297410b30, putative proteorhodopsin gene, partial cds. KJ927610 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), English Channel (48.7717, -3.9683) TTAATAACAGTACCACTTCAAATAATAGAATTTTATTTAGTTATTGCTGCAGTAACTGCTATTTCAGCAGTTATTTTCTGGAAGCTTTTAATAGCTTCTATAGTAATGCTAGTTTTTGGATATTTCGGAGAAACTGGACTTATGAATGTAACCGTTGGTTTTATAATTGGTATGGTCGCTTGGCTGTACATTATTTATGAGATTTTCTTAGGAGAAACTGCCGCAGCGAACGCCTCGAGCGGAAATGCTGCTAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACTGTA LITVPLQIIEFYLVIAAVTAISAVIFWKLLIASIVMLVFGYFGETGLMNVTVGFIIGMVAWLYIIYEIFLGETAAANASSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTACCACTTCAAATAATAGAATTTTATTTAGTTATTGCTGCA---------GTA---ACTGCTATTTCAGCA---GTTATT------------------------------------TTCTGGAAG---CTTTTAATAGCTTCTATAGTAATGCTAGTTTTTGGATATTTCGGAGAA---------ACT------------------GGA------CTT---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACCGTTGGT---TTTATAATTGGTATGGTCGCTTGGCTGTACATTATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCCGCAGCGAACGCCTCG------AGC---GGAAATGCTGCTAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-VI------------FWK-LLIASIVMLVFGYFGE---T------G--L-----------M----------------------NV------TVG-FIIGMVAWLYIIYEI-----F--L-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927599 [I-Gamma3-HF130_81H07] PRGD_OTU012_97948be982bf2274d2d7404a1cc490f6 gb|KJ927599| PRGD_OTU012_97948be982bf2274d2d7404a1cc490f6, putative proteorhodopsin gene, partial cds. PRGD_OTU012_97948be982bf2274d2d7404a1cc490f6, putative proteorhodopsin gene, partial cds. KJ927599 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (33.935, 18.508), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAATAACAGTACCACTTCAAATAATCGAATTTTATTTAGTTATTGCTGCAGTAACTGCTATTTCAGCAGTTATTTTCTGGAAGCTTTTAATAGCTTCTATAGTAATGCTAGTTTTTGGATATTTCGGAGAAACTGGACTTATGAATGTGACCGTTGGTTTTATAATTGGTATGGTCGCTTGGCTATACATAATTTATGAGATTTTCTTAGGAGAAACTGCCGCAGCGAATGCCTCGAGCGGAAATGCTGCTAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACTGTT LITVPLQIIEFYLVIAAVTAISAVIFWKLLIASIVMLVFGYFGETGLMNVTVGFIIGMVAWLYIIYEIFLGETAAANASSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTACCACTTCAAATAATCGAATTTTATTTAGTTATTGCTGCA---------GTA---ACTGCTATTTCAGCA---GTTATT------------------------------------TTCTGGAAG---CTTTTAATAGCTTCTATAGTAATGCTAGTTTTTGGATATTTCGGAGAA---------ACT------------------GGA------CTT---------------------------------ATG------------------------------------------------------------------AATGTG------------------ACCGTTGGT---TTTATAATTGGTATGGTCGCTTGGCTATACATAATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCCGCAGCGAATGCCTCG------AGC---GGAAATGCTGCTAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-VI------------FWK-LLIASIVMLVFGYFGE---T------G--L-----------M----------------------NV------TVG-FIIGMVAWLYIIYEI-----F--L-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927616 [I-Gamma3-HF130_81H07] PRGD_OTU012_ff0ffa5d8b8f4ff118d6ebd4120aab87 gb|KJ927616| PRGD_OTU012_ff0ffa5d8b8f4ff118d6ebd4120aab87, putative proteorhodopsin gene, partial cds. PRGD_OTU012_ff0ffa5d8b8f4ff118d6ebd4120aab87, putative proteorhodopsin gene, partial cds. KJ927616 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-14.48, 113.45) TTAATAACAGTACCACTTCAAATAATCGAATTTTATTTAGTTATTGCTGCAGTAACTGCTATTTCAGCAGTTATTTTCTGGAAGCTTTTAATAGCTTCTATAGTAATGCTAGTTTTTGGATATTTCGGAGAAACTGGACTTATGAATGTGACCGTTGGTTTTATAATTGGTATGGTCGCTTGGCTATACATAATTTATGAGATTTTCTTAGGAGAAACTGCCGCAGCGAATGCCTCAAGCGGAAATGCTGCTAGTCAACAAGCATTTAATACGATCAAATGGATTGTTACTGTT LITVPLQIIEFYLVIAAVTAISAVIFWKLLIASIVMLVFGYFGETGLMNVTVGFIIGMVAWLYIIYEIFLGETAAANASSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTACCACTTCAAATAATCGAATTTTATTTAGTTATTGCTGCA---------GTA---ACTGCTATTTCAGCA---GTTATT------------------------------------TTCTGGAAG---CTTTTAATAGCTTCTATAGTAATGCTAGTTTTTGGATATTTCGGAGAA---------ACT------------------GGA------CTT---------------------------------ATG------------------------------------------------------------------AATGTG------------------ACCGTTGGT---TTTATAATTGGTATGGTCGCTTGGCTATACATAATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCCGCAGCGAATGCCTCA------AGC---GGAAATGCTGCTAGT---CAA---CAA---GCA---TTT---AAT---ACGATC---AAATGGATTGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-VI------------FWK-LLIASIVMLVFGYFGE---T------G--L-----------M----------------------NV------TVG-FIIGMVAWLYIIYEI-----F--L-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927604 [I-Gamma3-HF130_81H07] PRGD_OTU012_a1d76344a1f22fb14d84abff0d784add gb|KJ927604| PRGD_OTU012_a1d76344a1f22fb14d84abff0d784add, putative proteorhodopsin gene, partial cds. PRGD_OTU012_a1d76344a1f22fb14d84abff0d784add, putative proteorhodopsin gene, partial cds. KJ927604 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTAATAACAGTACCACTTCAAATAATCGAATTTTATTTAGTTATTGCTGCAGTGACGGCCATTTCAGCAGTTATTTTCTGGAAGCTTTTAATAGCATCTATAGTAATGCTAGTTTTTGGATATTTCGGAGAAACTGGACTTATGAATGTGACTGTTGGTTTTATAATTGGTATGGTCGCTTGGCTATACATAATTTATGAAATTTTCTTAGGAGAAACTGCCGCAGCGAACGCCTCGAGCGGAAATGCTGCTAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACTGTA LITVPLQIIEFYLVIAAVTAISAVIFWKLLIASIVMLVFGYFGETGLMNVTVGFIIGMVAWLYIIYEIFLGETAAANASSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTACCACTTCAAATAATCGAATTTTATTTAGTTATTGCTGCA---------GTG---ACGGCCATTTCAGCA---GTTATT------------------------------------TTCTGGAAG---CTTTTAATAGCATCTATAGTAATGCTAGTTTTTGGATATTTCGGAGAA---------ACT------------------GGA------CTT---------------------------------ATG------------------------------------------------------------------AATGTG------------------ACTGTTGGT---TTTATAATTGGTATGGTCGCTTGGCTATACATAATTTATGAAATT---------------TTC------TTA---GGAGAAACTGCCGCAGCGAACGCCTCG------AGC---GGAAATGCTGCTAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-VI------------FWK-LLIASIVMLVFGYFGE---T------G--L-----------M----------------------NV------TVG-FIIGMVAWLYIIYEI-----F--L-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927601 [I-Gamma3-HF130_81H07] PRGD_OTU012_9a3b815abce530cd0b59d4801e55e44a gb|KJ927601| PRGD_OTU012_9a3b815abce530cd0b59d4801e55e44a, putative proteorhodopsin gene, partial cds. PRGD_OTU012_9a3b815abce530cd0b59d4801e55e44a, putative proteorhodopsin gene, partial cds. KJ927601 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTAATAACAGTACCACTTCAAATAATTGAATTTTATTTAGTTATTGCTGCAGTGACTGCTATTTCAGCAGTTATTTTCTGGAAGCTCTTAATAGCTTCTATAGTAATGCTAGTTTTTGGATATTTCGGAGAAACTGGACTTATGAATGTGACTGTTGGTTTTATAATTGGTATGGTCGCTTGGCTATATATAATTTATGAGATTTTCTTAGGAGAAACTGCCGCAGCGAACGCCTCGAGTGGAAATGCTGCTAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACTGTA LITVPLQIIEFYLVIAAVTAISAVIFWKLLIASIVMLVFGYFGETGLMNVTVGFIIGMVAWLYIIYEIFLGETAAANASSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTACCACTTCAAATAATTGAATTTTATTTAGTTATTGCTGCA---------GTG---ACTGCTATTTCAGCA---GTTATT------------------------------------TTCTGGAAG---CTCTTAATAGCTTCTATAGTAATGCTAGTTTTTGGATATTTCGGAGAA---------ACT------------------GGA------CTT---------------------------------ATG------------------------------------------------------------------AATGTG------------------ACTGTTGGT---TTTATAATTGGTATGGTCGCTTGGCTATATATAATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCCGCAGCGAACGCCTCG------AGT---GGAAATGCTGCTAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-VI------------FWK-LLIASIVMLVFGYFGE---T------G--L-----------M----------------------NV------TVG-FIIGMVAWLYIIYEI-----F--L-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927567 [I-Gamma3-HF130_81H07] PRGD_OTU012_0b7deb50a455d9b6322eece1f269edff gb|KJ927567| PRGD_OTU012_0b7deb50a455d9b6322eece1f269edff, putative proteorhodopsin gene, partial cds. PRGD_OTU012_0b7deb50a455d9b6322eece1f269edff, putative proteorhodopsin gene, partial cds. KJ927567 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) TTAATAACAGTACCACTTCAAATAATCGAATTTTATTTAGTTATTGCTGCAGTAACTGCTATCTCAGCAGTTATTTTCTGGAAGCTTTTAATAGCTTCTATAGTAATGCTAGTTTTTGGATATTTCGGGGAAACTGGACTTATGAATGTGACCGTTGGCTTTATAATTGGTATGGTCGCTTGGCTATACATAATTTATGAGATTTTCTTAGGAGAAACTGCCGCAGCGAACGCCTCGAGTGGAAATGCTGCTAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACTGTA LITVPLQIIEFYLVIAAVTAISAVIFWKLLIASIVMLVFGYFGETGLMNVTVGFIIGMVAWLYIIYEIFLGETAAANASSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTACCACTTCAAATAATCGAATTTTATTTAGTTATTGCTGCA---------GTA---ACTGCTATCTCAGCA---GTTATT------------------------------------TTCTGGAAG---CTTTTAATAGCTTCTATAGTAATGCTAGTTTTTGGATATTTCGGGGAA---------ACT------------------GGA------CTT---------------------------------ATG------------------------------------------------------------------AATGTG------------------ACCGTTGGC---TTTATAATTGGTATGGTCGCTTGGCTATACATAATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCCGCAGCGAACGCCTCG------AGT---GGAAATGCTGCTAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-VI------------FWK-LLIASIVMLVFGYFGE---T------G--L-----------M----------------------NV------TVG-FIIGMVAWLYIIYEI-----F--L-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927583 [I-Gamma3-HF130_81H07] PRGD_OTU012_52939b854885357ff24c62969ffd2a6e gb|KJ927583| PRGD_OTU012_52939b854885357ff24c62969ffd2a6e, putative proteorhodopsin gene, partial cds. PRGD_OTU012_52939b854885357ff24c62969ffd2a6e, putative proteorhodopsin gene, partial cds. KJ927583 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTAATAACAGTACCACTTCAAATAATCGAATTTTATTTAGTAATTGCTGCAGTAACTGCTATTTCAGCAGTTATTTTCTGGAAGCTTTTAATAGCTTCTATAGTAATGCTGGTTTTTGGATATTTCGGAGAAACTGGACTTATGAATGTGACTGTTGGTTTTATAATTGGTATGGTCGCTTGGCTATACATAATTTATGAGATTTTCTTAGGAGAAACTGCCGCAGCGAACGCCTCGAGTGGAAATGCTGCTAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACAGTA LITVPLQIIEFYLVIAAVTAISAVIFWKLLIASIVMLVFGYFGETGLMNVTVGFIIGMVAWLYIIYEIFLGETAAANASSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTACCACTTCAAATAATCGAATTTTATTTAGTAATTGCTGCA---------GTA---ACTGCTATTTCAGCA---GTTATT------------------------------------TTCTGGAAG---CTTTTAATAGCTTCTATAGTAATGCTGGTTTTTGGATATTTCGGAGAA---------ACT------------------GGA------CTT---------------------------------ATG------------------------------------------------------------------AATGTG------------------ACTGTTGGT---TTTATAATTGGTATGGTCGCTTGGCTATACATAATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCCGCAGCGAACGCCTCG------AGT---GGAAATGCTGCTAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-VI------------FWK-LLIASIVMLVFGYFGE---T------G--L-----------M----------------------NV------TVG-FIIGMVAWLYIIYEI-----F--L-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927565 [I-Gamma3-HF130_81H07] PRGD_OTU012_06e048cd8d3d1f76abe8cd1be589cfde gb|KJ927565| PRGD_OTU012_06e048cd8d3d1f76abe8cd1be589cfde, putative proteorhodopsin gene, partial cds. PRGD_OTU012_06e048cd8d3d1f76abe8cd1be589cfde, putative proteorhodopsin gene, partial cds. KJ927565 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATAACAGTACCACTTCAAATAATCGAATTTTATTTAGTAATTGCTGCAGTAACTGCTATTTCAGCAGTTATTTTCTGGAAGCTTTTAACAGCTTCCATAGTGATGCTGGTTTTTGGTTATTTTGGTGAAACTGGACTTATGAATGTGACTGTTGGTTTTATAATTGGTATGGTCGCTTGGCTATACATAATTTATGAGATTTTCTTAGGAGAAACTGCCGCAGCGAACGCCTCGAGCGGAAATGCTGCTAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACTGTA LITVPLQIIEFYLVIAAVTAISAVIFWKLLTASIVMLVFGYFGETGLMNVTVGFIIGMVAWLYIIYEIFLGETAAANASSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTACCACTTCAAATAATCGAATTTTATTTAGTAATTGCTGCA---------GTA---ACTGCTATTTCAGCA---GTTATT------------------------------------TTCTGGAAG---CTTTTAACAGCTTCCATAGTGATGCTGGTTTTTGGTTATTTTGGTGAA---------ACT------------------GGA------CTT---------------------------------ATG------------------------------------------------------------------AATGTG------------------ACTGTTGGT---TTTATAATTGGTATGGTCGCTTGGCTATACATAATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCCGCAGCGAACGCCTCG------AGC---GGAAATGCTGCTAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-VI------------FWK-LLTASIVMLVFGYFGE---T------G--L-----------M----------------------NV------TVG-FIIGMVAWLYIIYEI-----F--L-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927587 [I-Gamma3-HF130_81H07] PRGD_OTU012_68146501a3bd4554a109f8ce298abeaa gb|KJ927587| PRGD_OTU012_68146501a3bd4554a109f8ce298abeaa, putative proteorhodopsin gene, partial cds. PRGD_OTU012_68146501a3bd4554a109f8ce298abeaa, putative proteorhodopsin gene, partial cds. KJ927587 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-14.48, 113.45) TTAATAACAGTACCACTTCAAATAATCGAATTTTATTTAGTAATTGCTGCAGTAACTGCTATTTCAGCAGTTATTTTCTGGAAGCTTTTAACAGCTTCCATAGTGATGCTGGTTTTTGGTTATTTTGGTGAAACTGGACTTATGAATGTGACTGTTGGTTTTATAATTGGTATGGTCGCTTGGCTATACATAATTTATGAGATTTTCTTAGGAGAAACTGCCGCAGCTAACGCCTCGAGTGGAAATGCTGCTAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACCGTA LITVPLQIIEFYLVIAAVTAISAVIFWKLLTASIVMLVFGYFGETGLMNVTVGFIIGMVAWLYIIYEIFLGETAAANASSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACAGTACCACTTCAAATAATCGAATTTTATTTAGTAATTGCTGCA---------GTA---ACTGCTATTTCAGCA---GTTATT------------------------------------TTCTGGAAG---CTTTTAACAGCTTCCATAGTGATGCTGGTTTTTGGTTATTTTGGTGAA---------ACT------------------GGA------CTT---------------------------------ATG------------------------------------------------------------------AATGTG------------------ACTGTTGGT---TTTATAATTGGTATGGTCGCTTGGCTATACATAATTTATGAGATT---------------TTC------TTA---GGAGAAACTGCCGCAGCTAACGCCTCG------AGT---GGAAATGCTGCTAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-VI------------FWK-LLTASIVMLVFGYFGE---T------G--L-----------M----------------------NV------TVG-FIIGMVAWLYIIYEI-----F--L-GETAAANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927571 [I-Gamma3-HF130_81H07] PRGD_OTU012_1db05051aecb2e47739872d152effe8d gb|KJ927571| PRGD_OTU012_1db05051aecb2e47739872d152effe8d, putative proteorhodopsin gene, partial cds. PRGD_OTU012_1db05051aecb2e47739872d152effe8d, putative proteorhodopsin gene, partial cds. KJ927571 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Pacific side (70.9139, -128.9264; ; ; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) TTAATTACAGTGCCTTTACAAATAATTGAGTTCTATTTAGTTGTTGCTGCGGTAACTACTATTAGTGCAATTATATTCTGGAAGCTATTGATTGCTTCAATATTAATGTTGGTCTTTGGTTATCTTGGTGAAACTGGTCTTATGGACGTCACGATTGGTTGGATCCTTGGGATGATCGCTTGGTTCTACATTATTTATGAAATTTTCTTCGGTGAGACTGCTGCTGCCAATGCAGGAAGTGGAAACGCTGCAAGTCAACAAGCTTTTAACACCATCAAATGGATTGTAACTGTT LITVPLQIIEFYLVVAAVTTISAIIFWKLLIASILMLVFGYLGETGLMDVTIGWILGMIAWFYIIYEIFFGETAAANAGSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCTTTACAAATAATTGAGTTCTATTTAGTTGTTGCTGCG---------GTA---ACTACTATTAGTGCA---ATTATA------------------------------------TTCTGGAAG---CTATTGATTGCTTCAATATTAATGTTGGTCTTTGGTTATCTTGGTGAA---------ACT------------------GGT------CTT---------------------------------ATG------------------------------------------------------------------GACGTC------------------ACGATTGGT---TGGATCCTTGGGATGATCGCTTGGTTCTACATTATTTATGAAATT---------------TTC------TTC---GGTGAGACTGCTGCTGCCAATGCAGGA------AGT---GGAAACGCTGCAAGT---CAA---CAA---GCT---TTT---AAC---ACCATC---AAATGGATTGTAACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVVAA---V-TTISA-II------------FWK-LLIASILMLVFGYLGE---T------G--L-----------M----------------------DV------TIG-WILGMIAWFYIIYEI-----F--F-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927600 [I-Gamma3-HF130_81H07] PRGD_OTU012_9a09eda122e84e5b52b61d5d5fe5c65f gb|KJ927600| PRGD_OTU012_9a09eda122e84e5b52b61d5d5fe5c65f, putative proteorhodopsin gene, partial cds. PRGD_OTU012_9a09eda122e84e5b52b61d5d5fe5c65f, putative proteorhodopsin gene, partial cds. KJ927600 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTAATTACAGTGCCTTTACAAATAATTGAGTTCTATTTAGTTGTTGCTGCGGTAACTGCTATTAGTGCAGTTATATTCTGGAAGTTATTGATTGCTTCAATATTAATGTTGGTCTTTGGTTATCTTGGTGAAACCGGTCTTATGGACGTCACGATTGGTTGGATCCTTGGAATGATTGCTTGGTTCTACATTATTTATGAAATTTTCTTCGGTGAGACTGCTGCTGCCAACGCAGGAAGTGGAAACGCTGCAAGTCAACAAGCTTTCAATACCATCAAATGGATTGTAACTGTT LITVPLQIIEFYLVVAAVTAISAVIFWKLLIASILMLVFGYLGETGLMDVTIGWILGMIAWFYIIYEIFFGETAAANAGSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCTTTACAAATAATTGAGTTCTATTTAGTTGTTGCTGCG---------GTA---ACTGCTATTAGTGCA---GTTATA------------------------------------TTCTGGAAG---TTATTGATTGCTTCAATATTAATGTTGGTCTTTGGTTATCTTGGTGAA---------ACC------------------GGT------CTT---------------------------------ATG------------------------------------------------------------------GACGTC------------------ACGATTGGT---TGGATCCTTGGAATGATTGCTTGGTTCTACATTATTTATGAAATT---------------TTC------TTC---GGTGAGACTGCTGCTGCCAACGCAGGA------AGT---GGAAACGCTGCAAGT---CAA---CAA---GCT---TTC---AAT---ACCATC---AAATGGATTGTAACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVVAA---V-TAISA-VI------------FWK-LLIASILMLVFGYLGE---T------G--L-----------M----------------------DV------TIG-WILGMIAWFYIIYEI-----F--F-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927617 [I-Gamma3-HF130_81H07] PRGD_OTU012_ff1787f0bfc8f1a749b519ae87c5818c gb|KJ927617| PRGD_OTU012_ff1787f0bfc8f1a749b519ae87c5818c, putative proteorhodopsin gene, partial cds. PRGD_OTU012_ff1787f0bfc8f1a749b519ae87c5818c, putative proteorhodopsin gene, partial cds. KJ927617 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTAATTACAGTGCCTTTACAAATAATTGAGTTCTATTTAGTTGTTGCTGCGGTAACTGCTATTAGTGCAGTTATATTCTGGAAGTTATTGATTGCTTCAATATTAATGTTGGTCTTTGGTTATCTTGGTGAAACTGGTCTTATGGACGTCACGATTGGTTGGATCCTTGGAATGATTGCTTGGTTCTACATTATTTATGAAATTTTCTTCGGTGAGACTGCTGCTGCCAATGCAGGAAGTGGAAACGCTGCAAGTCAACAAGCTTTCAATACCATCAAATGGATTGTAACTGTT LITVPLQIIEFYLVVAAVTAISAVIFWKLLIASILMLVFGYLGETGLMDVTIGWILGMIAWFYIIYEIFFGETAAANAGSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCTTTACAAATAATTGAGTTCTATTTAGTTGTTGCTGCG---------GTA---ACTGCTATTAGTGCA---GTTATA------------------------------------TTCTGGAAG---TTATTGATTGCTTCAATATTAATGTTGGTCTTTGGTTATCTTGGTGAA---------ACT------------------GGT------CTT---------------------------------ATG------------------------------------------------------------------GACGTC------------------ACGATTGGT---TGGATCCTTGGAATGATTGCTTGGTTCTACATTATTTATGAAATT---------------TTC------TTC---GGTGAGACTGCTGCTGCCAATGCAGGA------AGT---GGAAACGCTGCAAGT---CAA---CAA---GCT---TTC---AAT---ACCATC---AAATGGATTGTAACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVVAA---V-TAISA-VI------------FWK-LLIASILMLVFGYLGE---T------G--L-----------M----------------------DV------TIG-WILGMIAWFYIIYEI-----F--F-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927584 [I-Gamma3-HF130_81H07] PRGD_OTU012_55242cb8bbd76edd800c8bf9fa6ee483 gb|KJ927584| PRGD_OTU012_55242cb8bbd76edd800c8bf9fa6ee483, putative proteorhodopsin gene, partial cds. PRGD_OTU012_55242cb8bbd76edd800c8bf9fa6ee483, putative proteorhodopsin gene, partial cds. KJ927584 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTGCCTTTACAAATAATTGAGTTCTATTTAGTTGTTGCTGCGGTAACTACTATTAGTGCAATTATATTCTGGAAGCTATTGATTGCTTCAATTTTAATGTTGGTCTTTGGTTATCTTGGTGAAACTGGTCTTATGGACGTCACGATTGGTTGGATCCTTGGAATGATCGCTTGGTTCTACATTATTTATGAAATTTTCTTCGGTGAGACTGCTGCTGCTAATGCAGGAAGTGGAAACGCTGCAAGTCAACAAGCTTTTAATACCATCAAATGGATTGTAACTGTT LITVPLQIIEFYLVVAAVTTISAIIFWKLLIASILMLVFGYLGETGLMDVTIGWILGMIAWFYIIYEIFFGETAAANAGSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCTTTACAAATAATTGAGTTCTATTTAGTTGTTGCTGCG---------GTA---ACTACTATTAGTGCA---ATTATA------------------------------------TTCTGGAAG---CTATTGATTGCTTCAATTTTAATGTTGGTCTTTGGTTATCTTGGTGAA---------ACT------------------GGT------CTT---------------------------------ATG------------------------------------------------------------------GACGTC------------------ACGATTGGT---TGGATCCTTGGAATGATCGCTTGGTTCTACATTATTTATGAAATT---------------TTC------TTC---GGTGAGACTGCTGCTGCTAATGCAGGA------AGT---GGAAACGCTGCAAGT---CAA---CAA---GCT---TTT---AAT---ACCATC---AAATGGATTGTAACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVVAA---V-TTISA-II------------FWK-LLIASILMLVFGYLGE---T------G--L-----------M----------------------DV------TIG-WILGMIAWFYIIYEI-----F--F-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927606 [I-Gamma3-HF130_81H07] PRGD_OTU012_a92a8ffff18441a5d4340b66b92706e5 gb|KJ927606| PRGD_OTU012_a92a8ffff18441a5d4340b66b92706e5, putative proteorhodopsin gene, partial cds. PRGD_OTU012_a92a8ffff18441a5d4340b66b92706e5, putative proteorhodopsin gene, partial cds. KJ927606 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) TTAATTACAGTGCCTTTACAAATAATTGAGTTCTATTTAGTTGTTGCTGCGGTAACTACTATTAGTGCAATTATATTCTGGAAGCTTTTGATCGCTTCAGTATTAATGTTGGTCTTTGGTTATCTTGGTGAAACTGGTCTTATGGACGTCACGATTGGTTGGATCCTTGGGATGATCGCTTGGTTTTACATTATTTATGAAATTTTCTTCGGTGAGACTGCTGCTGCCAATGCAGGAAGTGGAAACGCTGCAAGTCAACAAGCTTTTAATACCATCAAATGGATTGTAACTGTT LITVPLQIIEFYLVVAAVTTISAIIFWKLLIASVLMLVFGYLGETGLMDVTIGWILGMIAWFYIIYEIFFGETAAANAGSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCTTTACAAATAATTGAGTTCTATTTAGTTGTTGCTGCG---------GTA---ACTACTATTAGTGCA---ATTATA------------------------------------TTCTGGAAG---CTTTTGATCGCTTCAGTATTAATGTTGGTCTTTGGTTATCTTGGTGAA---------ACT------------------GGT------CTT---------------------------------ATG------------------------------------------------------------------GACGTC------------------ACGATTGGT---TGGATCCTTGGGATGATCGCTTGGTTTTACATTATTTATGAAATT---------------TTC------TTC---GGTGAGACTGCTGCTGCCAATGCAGGA------AGT---GGAAACGCTGCAAGT---CAA---CAA---GCT---TTT---AAT---ACCATC---AAATGGATTGTAACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVVAA---V-TTISA-II------------FWK-LLIASVLMLVFGYLGE---T------G--L-----------M----------------------DV------TIG-WILGMIAWFYIIYEI-----F--F-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927575 [I-Gamma3-HF130_81H07] PRGD_OTU012_26bc018ac8d7a7aba5de0af35504833d gb|KJ927575| PRGD_OTU012_26bc018ac8d7a7aba5de0af35504833d, putative proteorhodopsin gene, partial cds. PRGD_OTU012_26bc018ac8d7a7aba5de0af35504833d, putative proteorhodopsin gene, partial cds. KJ927575 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTGCCTTTACAAATAATTGAGTTCTACTTAGTTGTTGCTGCGGTAACTACTATTAGTGCAATTATATTCTGGAAGCTTTTAATTGCTTCAATATTAATGTTGGTCTTTGGTTATCTTGGTGAAACTGGTCTTATGGACGTCACGATTGGTTGGATCCTTGGAATGATCGCTTGGTTCTACATTATTTATGAAATATTCTTCGGTGAGACTGCTGCTGCCAATGCAGGAAGTGGAAACGCTGCGAGTCAACAAGCTTTTAATACCATCAAATGGATTGTGACTGTT LITVPLQIIEFYLVVAAVTTISAIIFWKLLIASILMLVFGYLGETGLMDVTIGWILGMIAWFYIIYEIFFGETAAANAGSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCTTTACAAATAATTGAGTTCTACTTAGTTGTTGCTGCG---------GTA---ACTACTATTAGTGCA---ATTATA------------------------------------TTCTGGAAG---CTTTTAATTGCTTCAATATTAATGTTGGTCTTTGGTTATCTTGGTGAA---------ACT------------------GGT------CTT---------------------------------ATG------------------------------------------------------------------GACGTC------------------ACGATTGGT---TGGATCCTTGGAATGATCGCTTGGTTCTACATTATTTATGAAATA---------------TTC------TTC---GGTGAGACTGCTGCTGCCAATGCAGGA------AGT---GGAAACGCTGCGAGT---CAA---CAA---GCT---TTT---AAT---ACCATC---AAATGGATTGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVVAA---V-TTISA-II------------FWK-LLIASILMLVFGYLGE---T------G--L-----------M----------------------DV------TIG-WILGMIAWFYIIYEI-----F--F-GETAAANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927580 [I-Gamma3-HF130_81H07] PRGD_OTU012_43a52bcae180065d5469b31c0d88dce6 gb|KJ927580| PRGD_OTU012_43a52bcae180065d5469b31c0d88dce6, putative proteorhodopsin gene, partial cds. PRGD_OTU012_43a52bcae180065d5469b31c0d88dce6, putative proteorhodopsin gene, partial cds. KJ927580 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683) CTAATTACAGTGCCTTTACAAATAATTGAATTCTATTTGATTGTTGCTGCGGTAACGACAATTAGTGCAATTATTTTCTGGAAGCTCTTAACTGCTTCAATATTAATGTTAGTCTTCGGTTACCTAGGAGAAACTGGTCTTATGGACGTCACGATCGGTTGGGTTTTAGGAATGATCGCTTGGCTTTACATTATTTATGAAATATTCTTCGGCGAAACTGCTGCTGCAAATGCGGGAAGTGGTAATGCCGCAAGTCAACAAGCTTTTACAACCATTAAATGGATTGTTACTGTT LITVPLQIIEFYLIVAAVTTISAIIFWKLLTASILMLVFGYLGETGLMDVTIGWVLGMIAWLYIIYEIFFGETAAANAGSGNAASQQAFTTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTGCCTTTACAAATAATTGAATTCTATTTGATTGTTGCTGCG---------GTA---ACGACAATTAGTGCA---ATTATT------------------------------------TTCTGGAAG---CTCTTAACTGCTTCAATATTAATGTTAGTCTTCGGTTACCTAGGAGAA---------ACT------------------GGT------CTT---------------------------------ATG------------------------------------------------------------------GACGTC------------------ACGATCGGT---TGGGTTTTAGGAATGATCGCTTGGCTTTACATTATTTATGAAATA---------------TTC------TTC---GGCGAAACTGCTGCTGCAAATGCGGGA------AGT---GGTAATGCCGCAAGT---CAA---CAA---GCT---TTT---ACA---ACCATT---AAATGGATTGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLIVAA---V-TTISA-II------------FWK-LLTASILMLVFGYLGE---T------G--L-----------M----------------------DV------TIG-WVLGMIAWLYIIYEI-----F--F-GETAAANAG--S-GNAAS-Q-Q-A-F-T-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927588 [I-Gamma3-HF130_81H07] PRGD_OTU012_6c0f8ed4d8c7524c3976a8a8c1dac1ca gb|KJ927588| PRGD_OTU012_6c0f8ed4d8c7524c3976a8a8c1dac1ca, putative proteorhodopsin gene, partial cds. PRGD_OTU012_6c0f8ed4d8c7524c3976a8a8c1dac1ca, putative proteorhodopsin gene, partial cds. KJ927588 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTAATCACCGTTCCTCTTCAAATAATTGAATTTTATTTAGTTATTGCTGCTGTTACAGCAATTAGCGCTGCCATTTTCTGGAAGCTTCTAACTGCATCAATTGTGATGTTAGTTTTTGGATATCTCGGAGAAACTGGATTAATGGATGTAACTCTTGGTTGGGTGATTGGAATGATCGCTTGGCTTTACATCATTTATGAAATTTTCTTTGGTGAAACTGCTGCTGCTAATGCTGGAAGTGGAAACGCAGCCAGTCAGCAAGCATTTACAACAATTAAATGGATTGTGACTGTA LITVPLQIIEFYLVIAAVTAISAAIFWKLLTASIVMLVFGYLGETGLMDVTLGWVIGMIAWLYIIYEIFFGETAAANAGSGNAASQQAFTTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACCGTTCCTCTTCAAATAATTGAATTTTATTTAGTTATTGCTGCT---------GTT---ACAGCAATTAGCGCT---GCCATT------------------------------------TTCTGGAAG---CTTCTAACTGCATCAATTGTGATGTTAGTTTTTGGATATCTCGGAGAA---------ACT------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------GATGTA------------------ACTCTTGGT---TGGGTGATTGGAATGATCGCTTGGCTTTACATCATTTATGAAATT---------------TTC------TTT---GGTGAAACTGCTGCTGCTAATGCTGGA------AGT---GGAAACGCAGCCAGT---CAG---CAA---GCA---TTT---ACA---ACAATT---AAATGGATTGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLTASIVMLVFGYLGE---T------G--L-----------M----------------------DV------TLG-WVIGMIAWLYIIYEI-----F--F-GETAAANAG--S-GNAAS-Q-Q-A-F-T-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927614 [I-Gamma3-HF130_81H07] PRGD_OTU012_ed64460687dbad3b566ff06fe1fb1cd2 gb|KJ927614| PRGD_OTU012_ed64460687dbad3b566ff06fe1fb1cd2, putative proteorhodopsin gene, partial cds. PRGD_OTU012_ed64460687dbad3b566ff06fe1fb1cd2, putative proteorhodopsin gene, partial cds. KJ927614 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTAATTACCGTACCTCTACAAATAATTGAATTTTATTTAGTTATTGCTGCTGTTACAGCAATTAGCGCTGCCATCTTTTGGAAGCTTTTAACTGCATCAATTGTGATGCTTGTTTTTGGTTATCTCGGAGAAACTGGATTAATGGATGTAACTCTTGGTTGGGTGATCGGAATGATTGCTTGGCTATACATCATTTATGAAATCTTCTTTGGAGAAACTGCTAAAGCTAATGCCGGAAGTGGAAATGCAGCCAGTCAACAAGCATTTACAACAATTAAATGGATTGTGACTGTA LITVPLQIIEFYLVIAAVTAISAAIFWKLLTASIVMLVFGYLGETGLMDVTLGWVIGMIAWLYIIYEIFFGETAKANAGSGNAASQQAFTTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACCGTACCTCTACAAATAATTGAATTTTATTTAGTTATTGCTGCT---------GTT---ACAGCAATTAGCGCT---GCCATC------------------------------------TTTTGGAAG---CTTTTAACTGCATCAATTGTGATGCTTGTTTTTGGTTATCTCGGAGAA---------ACT------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------GATGTA------------------ACTCTTGGT---TGGGTGATCGGAATGATTGCTTGGCTATACATCATTTATGAAATC---------------TTC------TTT---GGAGAAACTGCTAAAGCTAATGCCGGA------AGT---GGAAATGCAGCCAGT---CAA---CAA---GCA---TTT---ACA---ACAATT---AAATGGATTGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLTASIVMLVFGYLGE---T------G--L-----------M----------------------DV------TLG-WVIGMIAWLYIIYEI-----F--F-GETAKANAG--S-GNAAS-Q-Q-A-F-T-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-HF130_81H07]_KJ927569 [I-Gamma3-HF130_81H07] PRGD_OTU012_13a5fdf0f06b95fb18e60a3c29d32001 gb|KJ927569| PRGD_OTU012_13a5fdf0f06b95fb18e60a3c29d32001, putative proteorhodopsin gene, partial cds. PRGD_OTU012_13a5fdf0f06b95fb18e60a3c29d32001, putative proteorhodopsin gene, partial cds. KJ927569 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/HF130_81H07-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 HF130_81H07-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) TTAATAACCGTTCCTCTTCAAATAATCGAATTTTATTTAGTTATCGCTGCTGTTACAGCTATCAGCGCAGCTATTTTCTGGAAGCTTTTAACTGCATCTATTGTGATGTTAGTTTTTGGTTACCTTGGAGAAACAGGATTAATGGATGTAACTCTTGGTTGGGTGATTGGAATGATTGCTTGGCTTTACATCATTTATGAAATTTTCTTTGGTGAAACTGCTGCTGCAAATGCTGGAAGTGGAAACGCAGCCAGTCAACAAGCATTTACTACAATTAAATGGATTGTGACTGTA LITVPLQIIEFYLVIAAVTAISAAIFWKLLTASIVMLVFGYLGETGLMDVTLGWVIGMIAWLYIIYEIFFGETAAANAGSGNAASQQAFTTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACCGTTCCTCTTCAAATAATCGAATTTTATTTAGTTATCGCTGCT---------GTT---ACAGCTATCAGCGCA---GCTATT------------------------------------TTCTGGAAG---CTTTTAACTGCATCTATTGTGATGTTAGTTTTTGGTTACCTTGGAGAA---------ACA------------------GGA------TTA---------------------------------ATG------------------------------------------------------------------GATGTA------------------ACTCTTGGT---TGGGTGATTGGAATGATTGCTTGGCTTTACATCATTTATGAAATT---------------TTC------TTT---GGTGAAACTGCTGCTGCAAATGCTGGA------AGT---GGAAACGCAGCCAGT---CAA---CAA---GCA---TTT---ACT---ACAATT---AAATGGATTGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLVIAA---V-TAISA-AI------------FWK-LLTASIVMLVFGYLGE---T------G--L-----------M----------------------DV------TLG-WVIGMIAWLYIIYEI-----F--F-GETAAANAG--S-GNAAS-Q-Q-A-F-T-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-b]_KJ929091 [I-Gamma3-b] PRGD_OTU074a_f6230ca2a118b721d31e9e3c50f40416 gb|KJ929091| PRGD_OTU074a_f6230ca2a118b721d31e9e3c50f40416, putative proteorhodopsin gene, partial cds. PRGD_OTU074a_f6230ca2a118b721d31e9e3c50f40416, putative proteorhodopsin gene, partial cds. KJ929091 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Mediterranean Sea (33.762, 29.175; 33.935, 18.508) TTAATTACTGTACCGCTACAAATAATTGAATTTTATTTAATTATCGCTGCGGTTACTGCTATTAGTTCAGCTGTTTTCTGGAAACTCCTTATTGCTTCTCTAGTCATGCTTATCGGTGGTTTCATCGGTGAAGCTGGTTTAGGCGATGTCGTAGTATGGTGGATTGTTGGAATGATTGCTTGGCTTTACATCATTTATGAAATCTTTTTGGGTGAAACTGCAAAAGCAAACGCTGGCAGTGGAAACGCAGCAAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACTGTA LITVPLQIIEFYLIIAAVTAISSAVFWKLLIASLVMLIGGFIGEAGLGDVVVWWIVGMIAWLYIIYEIFLGETAKANAGSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCGCTACAAATAATTGAATTTTATTTAATTATCGCTGCG---------GTT---ACTGCTATTAGTTCA---GCTGTT------------------------------------TTCTGGAAA---CTCCTTATTGCTTCTCTAGTCATGCTTATCGGTGGTTTCATCGGTGAA---------GCT------------------GGT------TTA---------------------------------GGC------------------------------------------------------------------GATGTC------------------GTAGTATGG---TGGATTGTTGGAATGATTGCTTGGCTTTACATCATTTATGAAATC---------------TTT------TTG---GGTGAAACTGCAAAAGCAAACGCTGGC------AGT---GGAAACGCAGCAAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLIIAA---V-TAISS-AV------------FWK-LLIASLVMLIGGFIGE---A------G--L-----------G----------------------DV------VVW-WIVGMIAWLYIIYEI-----F--L-GETAKANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-b]_KJ929086 [I-Gamma3-b] PRGD_OTU074a_674400daff8167e49c6f3df8ece7179b gb|KJ929086| PRGD_OTU074a_674400daff8167e49c6f3df8ece7179b, putative proteorhodopsin gene, partial cds. PRGD_OTU074a_674400daff8167e49c6f3df8ece7179b, putative proteorhodopsin gene, partial cds. KJ929086 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508) TTAATTACTGTACCGCTACAAATAATTGAATTTTATTTAATTATCGCTGCGGTTACTGCTATTAGTTCAGCAGTTTTCTGGAAACTCCTTATTGCTTCTCTGGTCATGCTTATCGGTGGTTTCATCGGTGAAGCTGGTTTAGGTGATGTCGTTGTATGGTGGGTTGTTGGAATGATCGCTTGGCTTTACATCATTTATGAAATCTTTTTGGGTGAAACTGCAAAAGCAAACGCTGGCAGTGGAAACGCAGCAAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACTGTA LITVPLQIIEFYLIIAAVTAISSAVFWKLLIASLVMLIGGFIGEAGLGDVVVWWVVGMIAWLYIIYEIFLGETAKANAGSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCGCTACAAATAATTGAATTTTATTTAATTATCGCTGCG---------GTT---ACTGCTATTAGTTCA---GCAGTT------------------------------------TTCTGGAAA---CTCCTTATTGCTTCTCTGGTCATGCTTATCGGTGGTTTCATCGGTGAA---------GCT------------------GGT------TTA---------------------------------GGT------------------------------------------------------------------GATGTC------------------GTTGTATGG---TGGGTTGTTGGAATGATCGCTTGGCTTTACATCATTTATGAAATC---------------TTT------TTG---GGTGAAACTGCAAAAGCAAACGCTGGC------AGT---GGAAACGCAGCAAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLIIAA---V-TAISS-AV------------FWK-LLIASLVMLIGGFIGE---A------G--L-----------G----------------------DV------VVW-WVVGMIAWLYIIYEI-----F--L-GETAKANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-b]_KJ929084 [I-Gamma3-b] PRGD_OTU074a_139456e80b39b4f06c1c0b288468828f gb|KJ929084| PRGD_OTU074a_139456e80b39b4f06c1c0b288468828f, putative proteorhodopsin gene, partial cds. PRGD_OTU074a_139456e80b39b4f06c1c0b288468828f, putative proteorhodopsin gene, partial cds. KJ929084 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-33.28, 45.35) TTAATTACTGTACCGCTACAAATAATTGAATTTTATTTAATTATCGCTGCGGTTACAGCTATTAGTTCAGCTGTTTTCTGGAAACTCCTTATTGCTTCGCTAGTCATGCTTATCGGTGGTTTCATCGGTGAAGCTGGTTTAGGCGACGTTGTAGTATGGTGGATTGTTGGAATGATTGCTTGGCTTTACATCATTTATGAAATTTTTGCTGGTGAAACTGCGAAGGCTAATGCGGGTAGTGGTAATGCTGCTAGTCAACAAGCCTTTAATACAATCAAGTGGATCGTGACTATT LITVPLQIIEFYLIIAAVTAISSAVFWKLLIASLVMLIGGFIGEAGLGDVVVWWIVGMIAWLYIIYEIFAGETAKANAGSGNAASQQAFNTIKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCGCTACAAATAATTGAATTTTATTTAATTATCGCTGCG---------GTT---ACAGCTATTAGTTCA---GCTGTT------------------------------------TTCTGGAAA---CTCCTTATTGCTTCGCTAGTCATGCTTATCGGTGGTTTCATCGGTGAA---------GCT------------------GGT------TTA---------------------------------GGC------------------------------------------------------------------GACGTT------------------GTAGTATGG---TGGATTGTTGGAATGATTGCTTGGCTTTACATCATTTATGAAATT---------------TTT------GCT---GGTGAAACTGCGAAGGCTAATGCGGGT------AGT---GGTAATGCTGCTAGT---CAA---CAA---GCC---TTT---AAT---ACAATC---AAGTGGATCGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLIIAA---V-TAISS-AV------------FWK-LLIASLVMLIGGFIGE---A------G--L-----------G----------------------DV------VVW-WIVGMIAWLYIIYEI-----F--A-GETAKANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-b]_KJ929090 [I-Gamma3-b] PRGD_OTU074a_e8591737b8f9fb7da550caf9084b782c gb|KJ929090| PRGD_OTU074a_e8591737b8f9fb7da550caf9084b782c, putative proteorhodopsin gene, partial cds. PRGD_OTU074a_e8591737b8f9fb7da550caf9084b782c, putative proteorhodopsin gene, partial cds. KJ929090 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTAATAACTGTACCGCTACAAATAATTGAATTTTATTTAATTATCGCTGCGGTTACTGCTATTAGCTCAGCTGTCTTCTGGAAACTCCTCATTGCATCACTAGTCATGCTTATCGGTGGTTTCATCGGTGAAGCAGGGTTAGGTGACGTTGTAGTGTGGTGGATTGTTGGAATGATTGCTTGGCTTTACATCATTTATGAAATCTTTGCTGGTGAAACTGCGAAGGCTAATGCGAGTAGTGGTAATGCTGCTAGTCAACAAGCCTTTAATACAATCAAGTGGATCGTGACTATT LITVPLQIIEFYLIIAAVTAISSAVFWKLLIASLVMLIGGFIGEAGLGDVVVWWIVGMIAWLYIIYEIFAGETAKANASSGNAASQQAFNTIKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACTGTACCGCTACAAATAATTGAATTTTATTTAATTATCGCTGCG---------GTT---ACTGCTATTAGCTCA---GCTGTC------------------------------------TTCTGGAAA---CTCCTCATTGCATCACTAGTCATGCTTATCGGTGGTTTCATCGGTGAA---------GCA------------------GGG------TTA---------------------------------GGT------------------------------------------------------------------GACGTT------------------GTAGTGTGG---TGGATTGTTGGAATGATTGCTTGGCTTTACATCATTTATGAAATC---------------TTT------GCT---GGTGAAACTGCGAAGGCTAATGCGAGT------AGT---GGTAATGCTGCTAGT---CAA---CAA---GCC---TTT---AAT---ACAATC---AAGTGGATCGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLIIAA---V-TAISS-AV------------FWK-LLIASLVMLIGGFIGE---A------G--L-----------G----------------------DV------VVW-WIVGMIAWLYIIYEI-----F--A-GETAKANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-b]_KJ929085 [I-Gamma3-b] PRGD_OTU074a_551e539ea2454bf63f74a45cd42fb871 gb|KJ929085| PRGD_OTU074a_551e539ea2454bf63f74a45cd42fb871, putative proteorhodopsin gene, partial cds. PRGD_OTU074a_551e539ea2454bf63f74a45cd42fb871, putative proteorhodopsin gene, partial cds. KJ929085 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73) TTAATTACTGTACCGCTACAAATAATTGAATTTTATTTAATTATAGCTGCGGTTACTGCTATTAGTTCAGCTGTTTTCTGGAAACTCCTTATTGCTTCGCTAGTCATGCTTATCGGTGGTTTCATCGGTGAAGCTGGTTTAGGCGACGTAGTAGTATGGTGGATTGTTGGAATGATTGCTTGGCTATACATCATTTATGAAATCTTTGCTGGTGAAACTGCGAAGGCTAACGCAAGTAGTGGTAATGTTGCTAGTCAACAAGCCTTTAATACAATCAAGTGGATTGTGACTATT LITVPLQIIEFYLIIAAVTAISSAVFWKLLIASLVMLIGGFIGEAGLGDVVVWWIVGMIAWLYIIYEIFAGETAKANASSGNVASQQAFNTIKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCGCTACAAATAATTGAATTTTATTTAATTATAGCTGCG---------GTT---ACTGCTATTAGTTCA---GCTGTT------------------------------------TTCTGGAAA---CTCCTTATTGCTTCGCTAGTCATGCTTATCGGTGGTTTCATCGGTGAA---------GCT------------------GGT------TTA---------------------------------GGC------------------------------------------------------------------GACGTA------------------GTAGTATGG---TGGATTGTTGGAATGATTGCTTGGCTATACATCATTTATGAAATC---------------TTT------GCT---GGTGAAACTGCGAAGGCTAACGCAAGT------AGT---GGTAATGTTGCTAGT---CAA---CAA---GCC---TTT---AAT---ACAATC---AAGTGGATTGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLIIAA---V-TAISS-AV------------FWK-LLIASLVMLIGGFIGE---A------G--L-----------G----------------------DV------VVW-WIVGMIAWLYIIYEI-----F--A-GETAKANAS--S-GNVAS-Q-Q-A-F-N-TI-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-b]_KJ929088 [I-Gamma3-b] PRGD_OTU074a_bd0445b7a4e706b723f1a357ccbde8ed gb|KJ929088| PRGD_OTU074a_bd0445b7a4e706b723f1a357ccbde8ed, putative proteorhodopsin gene, partial cds. PRGD_OTU074a_bd0445b7a4e706b723f1a357ccbde8ed, putative proteorhodopsin gene, partial cds. KJ929088 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Atlantic side (73.9992, 19.2097), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45; -33.28, 45.35) TTAATTACTGTACCGCTACAAATAATTGAATTTTATTTAATTATCGCTGCGGTTACTGCTATTAGTTCAGCTGTTTTCTGGAAACTCCTTATTGCTTCTCTAGTCATGCTTATCGGTGGTTTCATCGGTGAAGCTGGTTTAGGCGATGTCGTAGTATGGTGGATTGTTGGAATGATTGCTTGGCTTTACATCATTTATGAAATTTTTGCTGGTGAAACTGCGAAGGCTAATGCGAGTAGTGGTAATGCTGCTAGTCAACAAGCCTTTAATACAATCAAGTGGATTGTGACTATT LITVPLQIIEFYLIIAAVTAISSAVFWKLLIASLVMLIGGFIGEAGLGDVVVWWIVGMIAWLYIIYEIFAGETAKANASSGNAASQQAFNTIKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTACCGCTACAAATAATTGAATTTTATTTAATTATCGCTGCG---------GTT---ACTGCTATTAGTTCA---GCTGTT------------------------------------TTCTGGAAA---CTCCTTATTGCTTCTCTAGTCATGCTTATCGGTGGTTTCATCGGTGAA---------GCT------------------GGT------TTA---------------------------------GGC------------------------------------------------------------------GATGTC------------------GTAGTATGG---TGGATTGTTGGAATGATTGCTTGGCTTTACATCATTTATGAAATT---------------TTT------GCT---GGTGAAACTGCGAAGGCTAATGCGAGT------AGT---GGTAATGCTGCTAGT---CAA---CAA---GCC---TTT---AAT---ACAATC---AAGTGGATTGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLIIAA---V-TAISS-AV------------FWK-LLIASLVMLIGGFIGE---A------G--L-----------G----------------------DV------VVW-WIVGMIAWLYIIYEI-----F--A-GETAKANAS--S-GNAAS-Q-Q-A-F-N-TI-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-b]_KJ929083 [I-Gamma3-b] PRGD_OTU074a_061fcc9b255d6321629c03857a23675d gb|KJ929083| PRGD_OTU074a_061fcc9b255d6321629c03857a23675d, putative proteorhodopsin gene, partial cds. PRGD_OTU074a_061fcc9b255d6321629c03857a23675d, putative proteorhodopsin gene, partial cds. KJ929083 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTGATCACTGTACCTCTTCAAATTGTTGAGTTTTATTTAATTATTGCTGCTGTTACAGCAGTAAGCTCAGCAGTTTTCTGGAAACTTTTAATTGCATCACTTGTGATGTTAGTTGGTGGTTTCATTGGAGAAGCAGGTCTTGGTGATGTAGTTGTATGGTGGATCGTTGGAATGATCGCTTGGCTTTACATCATTTATGAAATCTTCATGGGTGAAACTGCAAAAGCAAACGCTGGCAGTGGACACCTTGCAAGTCAACAAGCATTCAACACAATCAAATGGATTGTGACTATT LITVPLQIVEFYLIIAAVTAVSSAVFWKLLIASLVMLVGGFIGEAGLGDVVVWWIVGMIAWLYIIYEIFMGETAKANAGSGHLASQQAFNTIKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTACCTCTTCAAATTGTTGAGTTTTATTTAATTATTGCTGCT---------GTT---ACAGCAGTAAGCTCA---GCAGTT------------------------------------TTCTGGAAA---CTTTTAATTGCATCACTTGTGATGTTAGTTGGTGGTTTCATTGGAGAA---------GCA------------------GGT------CTT---------------------------------GGT------------------------------------------------------------------GATGTA------------------GTTGTATGG---TGGATCGTTGGAATGATCGCTTGGCTTTACATCATTTATGAAATC---------------TTC------ATG---GGTGAAACTGCAAAAGCAAACGCTGGC------AGT---GGACACCTTGCAAGT---CAA---CAA---GCA---TTC---AAC---ACAATC---AAATGGATTGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLIIAA---V-TAVSS-AV------------FWK-LLIASLVMLVGGFIGE---A------G--L-----------G----------------------DV------VVW-WIVGMIAWLYIIYEI-----F--M-GETAKANAG--S-GHLAS-Q-Q-A-F-N-TI-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-b]_KJ929089 [I-Gamma3-b] PRGD_OTU074a_d2aa4b414f86c2d094e74fbcbc548af4 gb|KJ929089| PRGD_OTU074a_d2aa4b414f86c2d094e74fbcbc548af4, putative proteorhodopsin gene, partial cds. PRGD_OTU074a_d2aa4b414f86c2d094e74fbcbc548af4, putative proteorhodopsin gene, partial cds. KJ929089 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATCACTGTACCTCTTCAAATTGTTGAGTTTTATTTAATTATTGCTGCTGTTACAGCAGTAAGCTCAGCGGTTTTCTGGAAACTTTTAATTGCATCACTTGTGATGTTAGTTGGTGGTTTCATTGGAGAAGCAGGTCTTGGTGATGTAGTCGTATGGTGGATCGTTGGAATGATCGCTTGGCTTTACATCATTTATGAAATCTTCATGGGTGAAACTGCAAAAGCAAACGCTGGCAGTGGACACCTTGCAAGTCAACAAGCATTCAACACAATCAAATGGATTGTGACTATT LITVPLQIVEFYLIIAAVTAVSSAVFWKLLIASLVMLVGGFIGEAGLGDVVVWWIVGMIAWLYIIYEIFMGETAKANAGSGHLASQQAFNTIKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTACCTCTTCAAATTGTTGAGTTTTATTTAATTATTGCTGCT---------GTT---ACAGCAGTAAGCTCA---GCGGTT------------------------------------TTCTGGAAA---CTTTTAATTGCATCACTTGTGATGTTAGTTGGTGGTTTCATTGGAGAA---------GCA------------------GGT------CTT---------------------------------GGT------------------------------------------------------------------GATGTA------------------GTCGTATGG---TGGATCGTTGGAATGATCGCTTGGCTTTACATCATTTATGAAATC---------------TTC------ATG---GGTGAAACTGCAAAAGCAAACGCTGGC------AGT---GGACACCTTGCAAGT---CAA---CAA---GCA---TTC---AAC---ACAATC---AAATGGATTGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLIIAA---V-TAVSS-AV------------FWK-LLIASLVMLVGGFIGE---A------G--L-----------G----------------------DV------VVW-WIVGMIAWLYIIYEI-----F--M-GETAKANAG--S-GHLAS-Q-Q-A-F-N-TI-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-b]_KJ929087 [I-Gamma3-b] PRGD_OTU074a_b482ab8bb49df50cbf306cef845907af gb|KJ929087| PRGD_OTU074a_b482ab8bb49df50cbf306cef845907af, putative proteorhodopsin gene, partial cds. PRGD_OTU074a_b482ab8bb49df50cbf306cef845907af, putative proteorhodopsin gene, partial cds. KJ929087 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTGATCACTGTACCTCTTCAAATTGTTGAGTTTTATTTAATTATTGCTGCTGTTACAGCAGTTAGCTCAGCCGTATTCTGGAAACTTTTAATTGCATCACTTGTGATGTTAATTGGTGGTTTCATTGGAGAAGCAGGTCTTGGTGATGTAGTCGTATGGTGGATCGTTGGAATGATCGCTTGGCTTTACATCATTTATGAAATCTTCATGGGTGAAACTGCAAAAGCAAACGCTGGCAGTGGACACCTTGCAAGTCAACAAGCATTCAACACAATCAAATGGATTGTGACTATT LITVPLQIVEFYLIIAAVTAVSSAVFWKLLIASLVMLIGGFIGEAGLGDVVVWWIVGMIAWLYIIYEIFMGETAKANAGSGHLASQQAFNTIKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTACCTCTTCAAATTGTTGAGTTTTATTTAATTATTGCTGCT---------GTT---ACAGCAGTTAGCTCA---GCCGTA------------------------------------TTCTGGAAA---CTTTTAATTGCATCACTTGTGATGTTAATTGGTGGTTTCATTGGAGAA---------GCA------------------GGT------CTT---------------------------------GGT------------------------------------------------------------------GATGTA------------------GTCGTATGG---TGGATCGTTGGAATGATCGCTTGGCTTTACATCATTTATGAAATC---------------TTC------ATG---GGTGAAACTGCAAAAGCAAACGCTGGC------AGT---GGACACCTTGCAAGT---CAA---CAA---GCA---TTC---AAC---ACAATC---AAATGGATTGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLIIAA---V-TAVSS-AV------------FWK-LLIASLVMLIGGFIGE---A------G--L-----------G----------------------DV------VVW-WIVGMIAWLYIIYEI-----F--M-GETAKANAG--S-GHLAS-Q-Q-A-F-N-TI-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-b]_KJ929082 [I-Gamma3-b] PRGD_OTU074a_otuREP_1d739a2c6b39e461f54a2f9a46f9220e gb|KJ929082| PRGD_OTU074a_otuREP_1d739a2c6b39e461f54a2f9a46f9220e, putative proteorhodopsin gene, partial cds. PRGD_OTU074a_otuREP_1d739a2c6b39e461f54a2f9a46f9220e, putative proteorhodopsin gene, partial cds. KJ929082 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637), Arctic Ocean-Atlantic side (73.9992, 19.2097), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.935, 18.508), Indian Ocean (-23.5956, 69.0419) TTGATCACTGTACCTCTTCAAATTGTTGAGTTTTACTTAATCATTGCTGCTGTTACAGCAGTTAGCTCAGCAGTTTTCTGGAAGCTTTTAATTGCATCATTAGTGATGTTAATTGGTGGTTTCATTGGAGAAGCAGGTCTTGGTGATGTAGTCGTATGGTGGATCGTTGGAATGATCGCTTGGCTTTACATTATTTATGAAATCTTCATGGGAGAGACTGCTAAAGCAAACGCTGGCAGTGGACACCTTGCAAGTCAACAAGCATTTAATACAATTAAATGGATTGTGACTATT LITVPLQIVEFYLIIAAVTAVSSAVFWKLLIASLVMLIGGFIGEAGLGDVVVWWIVGMIAWLYIIYEIFMGETAKANAGSGHLASQQAFNTIKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACTGTACCTCTTCAAATTGTTGAGTTTTACTTAATCATTGCTGCT---------GTT---ACAGCAGTTAGCTCA---GCAGTT------------------------------------TTCTGGAAG---CTTTTAATTGCATCATTAGTGATGTTAATTGGTGGTTTCATTGGAGAA---------GCA------------------GGT------CTT---------------------------------GGT------------------------------------------------------------------GATGTA------------------GTCGTATGG---TGGATCGTTGGAATGATCGCTTGGCTTTACATTATTTATGAAATC---------------TTC------ATG---GGAGAGACTGCTAAAGCAAACGCTGGC------AGT---GGACACCTTGCAAGT---CAA---CAA---GCA---TTT---AAT---ACAATT---AAATGGATTGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLIIAA---V-TAVSS-AV------------FWK-LLIASLVMLIGGFIGE---A------G--L-----------G----------------------DV------VVW-WIVGMIAWLYIIYEI-----F--M-GETAKANAG--S-GHLAS-Q-Q-A-F-N-TI-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-a]_KJ929092 [I-Gamma3-a] PRGD_OTU074b_otuREP_a09d7b12fd81e2d1d00b2a1e7cc1c752 gb|KJ929092| PRGD_OTU074b_otuREP_a09d7b12fd81e2d1d00b2a1e7cc1c752, putative proteorhodopsin gene, partial cds. PRGD_OTU074b_otuREP_a09d7b12fd81e2d1d00b2a1e7cc1c752, putative proteorhodopsin gene, partial cds. KJ929092 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Indian Ocean (-14.48, 113.45) TTGATTACTGTTCCGCTTCAAATTATTGAGTTTTATTTAATAATTGCGGCTGTTACAGCAATTAGCTCAGCAGTTTTCTGGAAACTTCTTATTGCATCATTAGTGATGTTGATTGGTGGTTTCATTGGTGAAGCTGGTTTAGGAGATGTCGTTGTATGGTGGATCGTTGGAATGATCGCTTGGCTTTACATCATTTATGAAATCTTTATGGGTGAAACTGCAAAAGCAAACGCTGGCAGTGGAAACGCAGCAAGTCAACAAGCATTTAATACAATCAAATGGATTGTTACAGTA LITVPLQIIEFYLIIAAVTAISSAVFWKLLIASLVMLIGGFIGEAGLGDVVVWWIVGMIAWLYIIYEIFMGETAKANAGSGNAASQQAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTTCCGCTTCAAATTATTGAGTTTTATTTAATAATTGCGGCT---------GTT---ACAGCAATTAGCTCA---GCAGTT------------------------------------TTCTGGAAA---CTTCTTATTGCATCATTAGTGATGTTGATTGGTGGTTTCATTGGTGAA---------GCT------------------GGT------TTA---------------------------------GGA------------------------------------------------------------------GATGTC------------------GTTGTATGG---TGGATCGTTGGAATGATCGCTTGGCTTTACATCATTTATGAAATC---------------TTT------ATG---GGTGAAACTGCAAAAGCAAACGCTGGC------AGT---GGAAACGCAGCAAGT---CAA---CAA---GCA---TTT---AAT---ACAATC---AAATGGATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLIIAA---V-TAISS-AV------------FWK-LLIASLVMLIGGFIGE---A------G--L-----------G----------------------DV------VVW-WIVGMIAWLYIIYEI-----F--M-GETAKANAG--S-GNAAS-Q-Q-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-a]_KJ929001 [I-Gamma3-a] PRGD_OTU067_0ecca681a176fcbfc4d5602ed0bfeb31 gb|KJ929001| PRGD_OTU067_0ecca681a176fcbfc4d5602ed0bfeb31, putative proteorhodopsin gene, partial cds. PRGD_OTU067_0ecca681a176fcbfc4d5602ed0bfeb31, putative proteorhodopsin gene, partial cds. KJ929001 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -33.9602, -73.3769), Arctic Ocean-Atlantic side (73.9992, 19.2097), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) TTAATCACAGTGCCACTTCAAATCATTGAGTTTTACTTAATTGTTGCAGCTGTAACAGCAGTAAGCGCAGGAATATTCTGGCGTTTGCTTATCGCATCAATAGTAATGCTTGTTGGTGGTTATCTTGGTGAAACTGGACTATGGGCACCTTCAGTAGGTTTTGCTGTTGGAATGATTGCTTGGGTATACATCATCTATGAAATATTTCTTGGTGAGACTGCCGCAGCCAATGCCTCTAGTGGAAACTCTGCAAGTCAAAGCGCATTTAACACGATTAAATGGATCGTAACTGTA LITVPLQIIEFYLIVAAVTAVSAGIFWRLLIASIVMLVGGYLGETGLWAPSVGFAVGMIAWVYIIYEIFLGETAAANASSGNSASQSAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTGCCACTTCAAATCATTGAGTTTTACTTAATTGTTGCAGCT---------GTA---ACAGCAGTAAGCGCA---GGAATA------------------------------------TTCTGGCGT---TTGCTTATCGCATCAATAGTAATGCTTGTTGGTGGTTATCTTGGTGAA---------ACT------------------GGA------CTA---------------------------------TGG------------------------------------------------------------------GCACCT------------------TCAGTAGGT---TTTGCTGTTGGAATGATTGCTTGGGTATACATCATCTATGAAATA---------------TTT------CTT---GGTGAGACTGCCGCAGCCAATGCCTCT------AGT---GGAAACTCTGCAAGT---CAA---AGC---GCA---TTT---AAC---ACGATT---AAATGGATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLIVAA---V-TAVSA-GI------------FWR-LLIASIVMLVGGYLGE---T------G--L-----------W----------------------AP------SVG-FAVGMIAWVYIIYEI-----F--L-GETAAANAS--S-GNSAS-Q-S-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-a]_KJ929004 [I-Gamma3-a] PRGD_OTU067_5c40c0369ef3e428b9c8a620d7b8e19a gb|KJ929004| PRGD_OTU067_5c40c0369ef3e428b9c8a620d7b8e19a, putative proteorhodopsin gene, partial cds. PRGD_OTU067_5c40c0369ef3e428b9c8a620d7b8e19a, putative proteorhodopsin gene, partial cds. KJ929004 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) TTAATCACAGTTCCACTTCAAATCATTGAGTTTTACTTAATTGTTGCAGCTGTAACAGCGGTAAGCGCAGGCATATTCTGGCGTTTACTTATCGCATCAATAGTAATGCTTGTTGGTGGTTATCTTGGTGAAACTGGACTATGGGCACCTTCAGTAGGTTTTGCTGTTGGAATGATTGCTTGGGTATACATCATCTATGAAATATTTCTTGGTGAGACTGCCGCAGCCAATGCCTCTAGTGGAAACTCTGCAAGTCAAAGCGCATTTAACACGATTAAATGGATTGTAACTGTA LITVPLQIIEFYLIVAAVTAVSAGIFWRLLIASIVMLVGGYLGETGLWAPSVGFAVGMIAWVYIIYEIFLGETAAANASSGNSASQSAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTTCCACTTCAAATCATTGAGTTTTACTTAATTGTTGCAGCT---------GTA---ACAGCGGTAAGCGCA---GGCATA------------------------------------TTCTGGCGT---TTACTTATCGCATCAATAGTAATGCTTGTTGGTGGTTATCTTGGTGAA---------ACT------------------GGA------CTA---------------------------------TGG------------------------------------------------------------------GCACCT------------------TCAGTAGGT---TTTGCTGTTGGAATGATTGCTTGGGTATACATCATCTATGAAATA---------------TTT------CTT---GGTGAGACTGCCGCAGCCAATGCCTCT------AGT---GGAAACTCTGCAAGT---CAA---AGC---GCA---TTT---AAC---ACGATT---AAATGGATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLIVAA---V-TAVSA-GI------------FWR-LLIASIVMLVGGYLGE---T------G--L-----------W----------------------AP------SVG-FAVGMIAWVYIIYEI-----F--L-GETAAANAS--S-GNSAS-Q-S-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-a]_KJ929006 [I-Gamma3-a] PRGD_OTU067_71dea9cce0c27401b451db3f57f32e05 gb|KJ929006| PRGD_OTU067_71dea9cce0c27401b451db3f57f32e05, putative proteorhodopsin gene, partial cds. PRGD_OTU067_71dea9cce0c27401b451db3f57f32e05, putative proteorhodopsin gene, partial cds. KJ929006 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATCACAGTTCCACTTCAAATCATTGAGTTTTACTTAATTGTTGCTGCTGTAACAGCGGTAAGCGCAGGCATATTCTGGCGTTTACTTATCGCATCAATAGTAATGCTTGTTGGTGGTTATCTTGGTGAAACAGGATTATGGGCACCTTCAGTTGGTTTTGCTGTCGGAATGATTGCTTGGATATACATCATCTATGAAATATTTCTTGGTGAGACTGCCGCAGCCAATGCCTCTAGTGGAAACTCTGCAAGTCAAAGCGCATTTAACACGATTAAATGGATTGTAACTGTA LITVPLQIIEFYLIVAAVTAVSAGIFWRLLIASIVMLVGGYLGETGLWAPSVGFAVGMIAWIYIIYEIFLGETAAANASSGNSASQSAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTTCCACTTCAAATCATTGAGTTTTACTTAATTGTTGCTGCT---------GTA---ACAGCGGTAAGCGCA---GGCATA------------------------------------TTCTGGCGT---TTACTTATCGCATCAATAGTAATGCTTGTTGGTGGTTATCTTGGTGAA---------ACA------------------GGA------TTA---------------------------------TGG------------------------------------------------------------------GCACCT------------------TCAGTTGGT---TTTGCTGTCGGAATGATTGCTTGGATATACATCATCTATGAAATA---------------TTT------CTT---GGTGAGACTGCCGCAGCCAATGCCTCT------AGT---GGAAACTCTGCAAGT---CAA---AGC---GCA---TTT---AAC---ACGATT---AAATGGATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLIVAA---V-TAVSA-GI------------FWR-LLIASIVMLVGGYLGE---T------G--L-----------W----------------------AP------SVG-FAVGMIAWIYIIYEI-----F--L-GETAAANAS--S-GNSAS-Q-S-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-a]_KJ929003 [I-Gamma3-a] PRGD_OTU067_42e86fc9f9791267e21d330305e770af gb|KJ929003| PRGD_OTU067_42e86fc9f9791267e21d330305e770af, putative proteorhodopsin gene, partial cds. PRGD_OTU067_42e86fc9f9791267e21d330305e770af, putative proteorhodopsin gene, partial cds. KJ929003 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATCACAGTACCACTTCAAATCATTGAGTTTTACTTAATTGTTGCGGCTGTTACGGTTGTAAGTGCAGGTATATTCTGGCGTTTACTTATCGCATCAATTGTAATGCTTGTTGGTGGTTATCTTGGTGAAACTGGACTATGGGCACCTTCAGTAGGTTTTGCTGTTGGAATGATTGCTTGGATATATATCATTTATGAGATATTTCTTGGTGAGACTGCTGCAGCCAATGCCTCTAGTGGAAACTCTGCAAGTCAAAGCGCATTTAACACAATTAAATGGATTGTAACTGTA LITVPLQIIEFYLIVAAVTVVSAGIFWRLLIASIVMLVGGYLGETGLWAPSVGFAVGMIAWIYIIYEIFLGETAAANASSGNSASQSAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTACCACTTCAAATCATTGAGTTTTACTTAATTGTTGCGGCT---------GTT---ACGGTTGTAAGTGCA---GGTATA------------------------------------TTCTGGCGT---TTACTTATCGCATCAATTGTAATGCTTGTTGGTGGTTATCTTGGTGAA---------ACT------------------GGA------CTA---------------------------------TGG------------------------------------------------------------------GCACCT------------------TCAGTAGGT---TTTGCTGTTGGAATGATTGCTTGGATATATATCATTTATGAGATA---------------TTT------CTT---GGTGAGACTGCTGCAGCCAATGCCTCT------AGT---GGAAACTCTGCAAGT---CAA---AGC---GCA---TTT---AAC---ACAATT---AAATGGATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLIVAA---V-TVVSA-GI------------FWR-LLIASIVMLVGGYLGE---T------G--L-----------W----------------------AP------SVG-FAVGMIAWIYIIYEI-----F--L-GETAAANAS--S-GNSAS-Q-S-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-a]_KJ929009 [I-Gamma3-a] PRGD_OTU067_b179d9887858af2d80763da2faf84a79 gb|KJ929009| PRGD_OTU067_b179d9887858af2d80763da2faf84a79, putative proteorhodopsin gene, partial cds. PRGD_OTU067_b179d9887858af2d80763da2faf84a79, putative proteorhodopsin gene, partial cds. KJ929009 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) TTAATCACAGTGCCACTTCAAATTATTGAGTTTTACTTAATTGTTGCAGCTGTTACAGCGGTGAGCGCAGGTATATTCTGGCGTTTACTTATCGCATCAATCGTAATGCTTGTTGGTGGTTATCTCGGTGAAACAGGACTATGGGCACCTTCAGTAGGTTTTGCTGTTGGAATGATTGCATGGGTATACATCATCTATGAAATATTTCTTGGTGAGACTGCCGCAGCCAATGCCTCTAGTGGAAACTCTGCGAGTCAAAGCGCATTTAATACAATTAAATGGATCGTAACTGTA LITVPLQIIEFYLIVAAVTAVSAGIFWRLLIASIVMLVGGYLGETGLWAPSVGFAVGMIAWVYIIYEIFLGETAAANASSGNSASQSAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTGCCACTTCAAATTATTGAGTTTTACTTAATTGTTGCAGCT---------GTT---ACAGCGGTGAGCGCA---GGTATA------------------------------------TTCTGGCGT---TTACTTATCGCATCAATCGTAATGCTTGTTGGTGGTTATCTCGGTGAA---------ACA------------------GGA------CTA---------------------------------TGG------------------------------------------------------------------GCACCT------------------TCAGTAGGT---TTTGCTGTTGGAATGATTGCATGGGTATACATCATCTATGAAATA---------------TTT------CTT---GGTGAGACTGCCGCAGCCAATGCCTCT------AGT---GGAAACTCTGCGAGT---CAA---AGC---GCA---TTT---AAT---ACAATT---AAATGGATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLIVAA---V-TAVSA-GI------------FWR-LLIASIVMLVGGYLGE---T------G--L-----------W----------------------AP------SVG-FAVGMIAWVYIIYEI-----F--L-GETAAANAS--S-GNSAS-Q-S-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-a]_KJ929008 [I-Gamma3-a] PRGD_OTU067_96651480a7e0451ee4fc1245dc1ec193 gb|KJ929008| PRGD_OTU067_96651480a7e0451ee4fc1245dc1ec193, putative proteorhodopsin gene, partial cds. PRGD_OTU067_96651480a7e0451ee4fc1245dc1ec193, putative proteorhodopsin gene, partial cds. KJ929008 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATCACAGTTCCACTTCAAATTATTGAGTTTTACTTAATTGTTGCGGCTGTTACAGCGGTAAGTGCAGGTATATTCTGGCGTTTACTTATTGCATCAATAGTAATGCTTGTTGGTGGTTATCTTGGTGAAACAGGACTATGGGCGCCTTCAGTAGGTTTTGCTGTTGGAATGATTGCTTGGATATACATCATCTATGAAATATTTCTGGGTGAGACTGCCGCAGCCAATGCCTCTAGTGGAAATGCTGCAAGTCAAAGCGCATTTAATACGATTAAATGGATTGTAACTGTA LITVPLQIIEFYLIVAAVTAVSAGIFWRLLIASIVMLVGGYLGETGLWAPSVGFAVGMIAWIYIIYEIFLGETAAANASSGNAASQSAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTTCCACTTCAAATTATTGAGTTTTACTTAATTGTTGCGGCT---------GTT---ACAGCGGTAAGTGCA---GGTATA------------------------------------TTCTGGCGT---TTACTTATTGCATCAATAGTAATGCTTGTTGGTGGTTATCTTGGTGAA---------ACA------------------GGA------CTA---------------------------------TGG------------------------------------------------------------------GCGCCT------------------TCAGTAGGT---TTTGCTGTTGGAATGATTGCTTGGATATACATCATCTATGAAATA---------------TTT------CTG---GGTGAGACTGCCGCAGCCAATGCCTCT------AGT---GGAAATGCTGCAAGT---CAA---AGC---GCA---TTT---AAT---ACGATT---AAATGGATTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLIVAA---V-TAVSA-GI------------FWR-LLIASIVMLVGGYLGE---T------G--L-----------W----------------------AP------SVG-FAVGMIAWIYIIYEI-----F--L-GETAAANAS--S-GNAAS-Q-S-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-a]_KJ929005 [I-Gamma3-a] PRGD_OTU067_687417958f43e90f653eaac7f781b800 gb|KJ929005| PRGD_OTU067_687417958f43e90f653eaac7f781b800, putative proteorhodopsin gene, partial cds. PRGD_OTU067_687417958f43e90f653eaac7f781b800, putative proteorhodopsin gene, partial cds. KJ929005 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATCACAGTACCACTTCAAATTATTGAGTTTTATTTGATTGTTGCAGCTGTTACAGCGGTAAGCGCAGGTATATTCTGGCGTTTACTTATTGCATCGATAGTAATGCTTGTTGGTGGTTATCTTGGTGAAACAGGACTATGGGCACCTTCAGTAGGTTTTGCTGTTGGAATGATTGCTTGGGTATACATCATCTATGAAATATTTCTTGGTGAGACTGCCGCAGCAAATGCTGCTAGTGGAAACTCTGCAAGTCAAAGCGCATTTAACACGATTAAATGGATTGTGACTGTA LITVPLQIIEFYLIVAAVTAVSAGIFWRLLIASIVMLVGGYLGETGLWAPSVGFAVGMIAWVYIIYEIFLGETAAANAASGNSASQSAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTACCACTTCAAATTATTGAGTTTTATTTGATTGTTGCAGCT---------GTT---ACAGCGGTAAGCGCA---GGTATA------------------------------------TTCTGGCGT---TTACTTATTGCATCGATAGTAATGCTTGTTGGTGGTTATCTTGGTGAA---------ACA------------------GGA------CTA---------------------------------TGG------------------------------------------------------------------GCACCT------------------TCAGTAGGT---TTTGCTGTTGGAATGATTGCTTGGGTATACATCATCTATGAAATA---------------TTT------CTT---GGTGAGACTGCCGCAGCAAATGCTGCT------AGT---GGAAACTCTGCAAGT---CAA---AGC---GCA---TTT---AAC---ACGATT---AAATGGATTGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLIVAA---V-TAVSA-GI------------FWR-LLIASIVMLVGGYLGE---T------G--L-----------W----------------------AP------SVG-FAVGMIAWVYIIYEI-----F--L-GETAAANAA--S-GNSAS-Q-S-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-a]_KJ929007 [I-Gamma3-a] PRGD_OTU067_89a1d1dab37696e6fbdb02da410dcca2 gb|KJ929007| PRGD_OTU067_89a1d1dab37696e6fbdb02da410dcca2, putative proteorhodopsin gene, partial cds. PRGD_OTU067_89a1d1dab37696e6fbdb02da410dcca2, putative proteorhodopsin gene, partial cds. KJ929007 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATCACAGTACCACTTCAAATTATTGAGTTTTACTTGATTGTTGCAGCTGTTACAGCGGTAAGCGCAGGTATATTCTGGCGTTTACTTATTGCATCGATAGTAATGCTTGTTGGTGGTTATCTTGGTGAAACAGGACTATGGGCACCTTCAGTAGGTTTTGCTGTTGGAATGATTGCTTGGGTATACATCATCTATGAAATATTTCTTGGTGAGACTGCCGCAGCTAATGCTGCAAGTGGAAACTCTGCAAGTCAAAGCGCATTTAACACGATTAAATGGATCGTAACTGTA LITVPLQIIEFYLIVAAVTAVSAGIFWRLLIASIVMLVGGYLGETGLWAPSVGFAVGMIAWVYIIYEIFLGETAAANAASGNSASQSAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTACCACTTCAAATTATTGAGTTTTACTTGATTGTTGCAGCT---------GTT---ACAGCGGTAAGCGCA---GGTATA------------------------------------TTCTGGCGT---TTACTTATTGCATCGATAGTAATGCTTGTTGGTGGTTATCTTGGTGAA---------ACA------------------GGA------CTA---------------------------------TGG------------------------------------------------------------------GCACCT------------------TCAGTAGGT---TTTGCTGTTGGAATGATTGCTTGGGTATACATCATCTATGAAATA---------------TTT------CTT---GGTGAGACTGCCGCAGCTAATGCTGCA------AGT---GGAAACTCTGCAAGT---CAA---AGC---GCA---TTT---AAC---ACGATT---AAATGGATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLIVAA---V-TAVSA-GI------------FWR-LLIASIVMLVGGYLGE---T------G--L-----------W----------------------AP------SVG-FAVGMIAWVYIIYEI-----F--L-GETAAANAA--S-GNSAS-Q-S-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-a]_KJ928999 [I-Gamma3-a] PRGD_OTU067_otuREP_e9e1a9793c8ac06d61104175a752cac3 gb|KJ928999| PRGD_OTU067_otuREP_e9e1a9793c8ac06d61104175a752cac3, putative proteorhodopsin gene, partial cds. PRGD_OTU067_otuREP_e9e1a9793c8ac06d61104175a752cac3, putative proteorhodopsin gene, partial cds. KJ928999 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTAATTACAGTACCACTTCAAATTATCGAGTTTTACTTGATTGTTGCTGCTGTTACAGCAGTAAGCGCAGGTATTTTCTGGCGTTTACTTATTGCATCAATTGTAATGCTTGTTGGTGGGTATCTTGGAGAGACAGGACTATGGGCACCTTCAGTAGGTTTTGCTGTTGGAATGATTGCATGGATATACATAATTTACGAAATATTTCTTGGTGAAACTGCTGCAGCTAACTCTGCGAGTGGAAACGCTGCGAGTCAAAGCGCATTTAATACCATCAAATGGATCGTAACTGTA LITVPLQIIEFYLIVAAVTAVSAGIFWRLLIASIVMLVGGYLGETGLWAPSVGFAVGMIAWIYIIYEIFLGETAAANSASGNAASQSAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTACCACTTCAAATTATCGAGTTTTACTTGATTGTTGCTGCT---------GTT---ACAGCAGTAAGCGCA---GGTATT------------------------------------TTCTGGCGT---TTACTTATTGCATCAATTGTAATGCTTGTTGGTGGGTATCTTGGAGAG---------ACA------------------GGA------CTA---------------------------------TGG------------------------------------------------------------------GCACCT------------------TCAGTAGGT---TTTGCTGTTGGAATGATTGCATGGATATACATAATTTACGAAATA---------------TTT------CTT---GGTGAAACTGCTGCAGCTAACTCTGCG------AGT---GGAAACGCTGCGAGT---CAA---AGC---GCA---TTT---AAT---ACCATC---AAATGGATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLIVAA---V-TAVSA-GI------------FWR-LLIASIVMLVGGYLGE---T------G--L-----------W----------------------AP------SVG-FAVGMIAWIYIIYEI-----F--L-GETAAANSA--S-GNAAS-Q-S-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-a]_KJ929011 [I-Gamma3-a] PRGD_OTU067_ea6ba89e2710752e17cd68b29dea8ebf gb|KJ929011| PRGD_OTU067_ea6ba89e2710752e17cd68b29dea8ebf, putative proteorhodopsin gene, partial cds. PRGD_OTU067_ea6ba89e2710752e17cd68b29dea8ebf, putative proteorhodopsin gene, partial cds. KJ929011 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTAATTACAGTACCACTTCAAATTATCGAGTTTTACTTGATTGTTGCAGCTGTTACAGCAGTAAGCGCAGGTATTTTCTGGCGTTTACTTATCGCATCAATTGTAATGCTTGTTGGTGGGTATCTTGGAGAGACAGGACTATGGGCACCTTCAGTAGGTTTTGCTGTTGGAATGATCGCATGGGTATACATAATTTACGAAATATTTCTTGGTGAAACTGCTGCAGCTAACTCTGCAAGTGGAAACGCTGCGAGTCAAAGCGCGTTTAATACCATCAAATGGATCGTAACTGTA LITVPLQIIEFYLIVAAVTAVSAGIFWRLLIASIVMLVGGYLGETGLWAPSVGFAVGMIAWVYIIYEIFLGETAAANSASGNAASQSAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTACCACTTCAAATTATCGAGTTTTACTTGATTGTTGCAGCT---------GTT---ACAGCAGTAAGCGCA---GGTATT------------------------------------TTCTGGCGT---TTACTTATCGCATCAATTGTAATGCTTGTTGGTGGGTATCTTGGAGAG---------ACA------------------GGA------CTA---------------------------------TGG------------------------------------------------------------------GCACCT------------------TCAGTAGGT---TTTGCTGTTGGAATGATCGCATGGGTATACATAATTTACGAAATA---------------TTT------CTT---GGTGAAACTGCTGCAGCTAACTCTGCA------AGT---GGAAACGCTGCGAGT---CAA---AGC---GCG---TTT---AAT---ACCATC---AAATGGATCGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLIVAA---V-TAVSA-GI------------FWR-LLIASIVMLVGGYLGE---T------G--L-----------W----------------------AP------SVG-FAVGMIAWVYIIYEI-----F--L-GETAAANSA--S-GNAAS-Q-S-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-a]_KJ929002 [I-Gamma3-a] PRGD_OTU067_1cb2df5dc14149a84a9de7eda65abfbe gb|KJ929002| PRGD_OTU067_1cb2df5dc14149a84a9de7eda65abfbe, putative proteorhodopsin gene, partial cds. PRGD_OTU067_1cb2df5dc14149a84a9de7eda65abfbe, putative proteorhodopsin gene, partial cds. KJ929002 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTGATCACAGTACCATTACAAATTATCGAGTTTTACTTGATTGTTGCCGCTGTAACAGCAGTAAGTGCAGGTATTTTCTGGCGCTTGCTTATTGCTTCAATCGTAATGCTTGTTGGTGGGTACCTTGGTGAAACAGGACTTTGGGCACCTTCAGTAGGTTTTGCTGTAGGAATGATCGCTTGGATATACATTATCTACGAAATATTTCTTGGTGAGACTGCTGCGGCTAATGCTTCAAGTGGAAACGCTGCAAGTCAAAGCGCTTTTAATACCATTAAATGGATTGTAACTGTT LITVPLQIIEFYLIVAAVTAVSAGIFWRLLIASIVMLVGGYLGETGLWAPSVGFAVGMIAWIYIIYEIFLGETAAANASSGNAASQSAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTACCATTACAAATTATCGAGTTTTACTTGATTGTTGCCGCT---------GTA---ACAGCAGTAAGTGCA---GGTATT------------------------------------TTCTGGCGC---TTGCTTATTGCTTCAATCGTAATGCTTGTTGGTGGGTACCTTGGTGAA---------ACA------------------GGA------CTT---------------------------------TGG------------------------------------------------------------------GCACCT------------------TCAGTAGGT---TTTGCTGTAGGAATGATCGCTTGGATATACATTATCTACGAAATA---------------TTT------CTT---GGTGAGACTGCTGCGGCTAATGCTTCA------AGT---GGAAACGCTGCAAGT---CAA---AGC---GCT---TTT---AAT---ACCATT---AAATGGATTGTAACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLIVAA---V-TAVSA-GI------------FWR-LLIASIVMLVGGYLGE---T------G--L-----------W----------------------AP------SVG-FAVGMIAWIYIIYEI-----F--L-GETAAANAS--S-GNAAS-Q-S-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-a]_KJ929000 [I-Gamma3-a] PRGD_OTU067_06aef0595a7e5fca52d8dbc520625f4c gb|KJ929000| PRGD_OTU067_06aef0595a7e5fca52d8dbc520625f4c, putative proteorhodopsin gene, partial cds. PRGD_OTU067_06aef0595a7e5fca52d8dbc520625f4c, putative proteorhodopsin gene, partial cds. KJ929000 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45; -33.28, 45.35) TTAATCACAGTCCCACTTCAAATCATTGAGTTTTACTTAATTGTTGCTGCTGTAACAGCAGTAAGCGCAGGTATATTCTGGCGTTTACTTATTGCATCAATTGTAATGCTTGTTGGTGGTTATCTTGGTGAAACAGGACTCTGGGCACCTTCAGTAGGTTTTGCTGTAGGAATGATTGCTTGGATATACATCATCTATGAAATATTTCTTGGTGAGACTGCTGCAGCCAATGCCTCTAGTGGAAACTCTGCAAGTCAAAGCGCATTTAATACGATTAAATGGATCGTAACAGTT LITVPLQIIEFYLIVAAVTAVSAGIFWRLLIASIVMLVGGYLGETGLWAPSVGFAVGMIAWIYIIYEIFLGETAAANASSGNSASQSAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTCCCACTTCAAATCATTGAGTTTTACTTAATTGTTGCTGCT---------GTA---ACAGCAGTAAGCGCA---GGTATA------------------------------------TTCTGGCGT---TTACTTATTGCATCAATTGTAATGCTTGTTGGTGGTTATCTTGGTGAA---------ACA------------------GGA------CTC---------------------------------TGG------------------------------------------------------------------GCACCT------------------TCAGTAGGT---TTTGCTGTAGGAATGATTGCTTGGATATACATCATCTATGAAATA---------------TTT------CTT---GGTGAGACTGCTGCAGCCAATGCCTCT------AGT---GGAAACTCTGCAAGT---CAA---AGC---GCA---TTT---AAT---ACGATT---AAATGGATCGTAACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLIVAA---V-TAVSA-GI------------FWR-LLIASIVMLVGGYLGE---T------G--L-----------W----------------------AP------SVG-FAVGMIAWIYIIYEI-----F--L-GETAAANAS--S-GNSAS-Q-S-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3-a]_KJ929010 [I-Gamma3-a] PRGD_OTU067_e4cd7c0d6999fcb061aff993dbdb3a88 gb|KJ929010| PRGD_OTU067_e4cd7c0d6999fcb061aff993dbdb3a88, putative proteorhodopsin gene, partial cds. PRGD_OTU067_e4cd7c0d6999fcb061aff993dbdb3a88, putative proteorhodopsin gene, partial cds. KJ929010 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3/A subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATCACAGTCCCACTTCAAATCATCGAGTTTTACTTGATTGTTGCTGCTGTTACAGCGGTGAGTGCCGGTATTTTCTGGCGTTTACTTATTGCTTCAATTGTAATGCTTGTTGGTGGTTACTTAGGAGAAACTGGACTATGGACGCCTTCAGTAGGTTTTGCCGTAGGAATGATCGCTTGGGTATACATCATCTATGAAATATTTCTTGGAGAAACTGCTGCAGCAAATGCTGCAAGTGGAAACTCTGCAAGTCAAAGCGCATTTAATACAATCAAATGGATTGTAACTGTT LITVPLQIIEFYLIVAAVTAVSAGIFWRLLIASIVMLVGGYLGETGLWTPSVGFAVGMIAWVYIIYEIFLGETAAANAASGNSASQSAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACAGTCCCACTTCAAATCATCGAGTTTTACTTGATTGTTGCTGCT---------GTT---ACAGCGGTGAGTGCC---GGTATT------------------------------------TTCTGGCGT---TTACTTATTGCTTCAATTGTAATGCTTGTTGGTGGTTACTTAGGAGAA---------ACT------------------GGA------CTA---------------------------------TGG------------------------------------------------------------------ACGCCT------------------TCAGTAGGT---TTTGCCGTAGGAATGATCGCTTGGGTATACATCATCTATGAAATA---------------TTT------CTT---GGAGAAACTGCTGCAGCAAATGCTGCA------AGT---GGAAACTCTGCAAGT---CAA---AGC---GCA---TTT---AAT---ACAATC---AAATGGATTGTAACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLIVAA---V-TAVSA-GI------------FWR-LLIASIVMLVGGYLGE---T------G--L-----------W----------------------TP------SVG-FAVGMIAWVYIIYEI-----F--L-GETAAANAA--S-GNSAS-Q-S-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3]_KJ929662 [I-Gamma3] PRGD_OTU186_otuREP_4d663a16bc95bfbeea3c4af12724e71d gb|KJ929662| PRGD_OTU186_otuREP_4d663a16bc95bfbeea3c4af12724e71d, putative proteorhodopsin gene, partial cds. PRGD_OTU186_otuREP_4d663a16bc95bfbeea3c4af12724e71d, putative proteorhodopsin gene, partial cds. KJ929662 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) TTTATAACCGTTCCATTGCAAGTGGTTGAGTTTTATTTGATAGTTGCTGCAGTAGCTGTAATTAGTGTTAGTGTATTTTGGCGATTACTTATTGCATCACTGATCATGCTAGTGGGCGGTTATTTAGGTGAAACAGGCATTTGGGAGCCGTCCATTGGGTTTACCATTGGCTTCATTGCCTGGTTATATATTATATATGAAATATTTAAAGGCCCTGCTGCAAAGGCAAATGCAAATAGTGGTAATGCAGCTAGCCAACAAGCGTTTACAACGATTAAATGGATTGTGACCGTT FITVPLQVVEFYLIVAAVAVISVSVFWRLLIASLIMLVGGYLGETGIWEPSIGFTIGFIAWLYIIYEIFKGPAAKANANSGNAASQQAFTTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATAACCGTTCCATTGCAAGTGGTTGAGTTTTATTTGATAGTTGCTGCA---------GTA---GCTGTAATTAGTGTT---AGTGTA------------------------------------TTTTGGCGA---TTACTTATTGCATCACTGATCATGCTAGTGGGCGGTTATTTAGGTGAA---------ACA------------------GGC------ATT---------------------------------TGG------------------------------------------------------------------GAGCCG------------------TCCATTGGG---TTTACCATTGGCTTCATTGCCTGGTTATATATTATATATGAAATA---------------TTT------AAA---GGCCCTGCTGCAAAGGCAAATGCAAAT------AGT---GGTAATGCAGCTAGC---CAA---CAA---GCG---TTT---ACA---ACGATT---AAATGGATTGTGACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQVVEFYLIVAA---V-AVISV-SV------------FWR-LLIASLIMLVGGYLGE---T------G--I-----------W----------------------EP------SIG-FTIGFIAWLYIIYEI-----F--K-GPAAKANAN--S-GNAAS-Q-Q-A-F-T-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3]_KJ929664 [I-Gamma3] PRGD_OTU186_eb4df50635c46f69dd5eb8703b1bb36d gb|KJ929664| PRGD_OTU186_eb4df50635c46f69dd5eb8703b1bb36d, putative proteorhodopsin gene, partial cds. PRGD_OTU186_eb4df50635c46f69dd5eb8703b1bb36d, putative proteorhodopsin gene, partial cds. KJ929664 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTCATAACCGTTCCATTACAAGTGGTTGAGTTTTATTTGATAGTTGCTGCAGTAGCTGTTATTAGCGTAAGTGTATTTTGGCGATTACTTATAGCATCGCTGATCATGCTAGTGGGTGGCTATTTAGGTGAAACAGGTATTTGGGAGCCTTCCATTGGGTTTACCATCGGCTTTATTGCATGGTTATATATTATATATGAAATATTTAAAGGCCCTGCTGCAAAAGCAAATGCAAATAGTGGTAATGCAGCTAGCCAACAAGCCTTCACAACCATTAAATGGATTGTAACCATT FITVPLQVVEFYLIVAAVAVISVSVFWRLLIASLIMLVGGYLGETGIWEPSIGFTIGFIAWLYIIYEIFKGPAAKANANSGNAASQQAFTTIKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCATAACCGTTCCATTACAAGTGGTTGAGTTTTATTTGATAGTTGCTGCA---------GTA---GCTGTTATTAGCGTA---AGTGTA------------------------------------TTTTGGCGA---TTACTTATAGCATCGCTGATCATGCTAGTGGGTGGCTATTTAGGTGAA---------ACA------------------GGT------ATT---------------------------------TGG------------------------------------------------------------------GAGCCT------------------TCCATTGGG---TTTACCATCGGCTTTATTGCATGGTTATATATTATATATGAAATA---------------TTT------AAA---GGCCCTGCTGCAAAAGCAAATGCAAAT------AGT---GGTAATGCAGCTAGC---CAA---CAA---GCC---TTC---ACA---ACCATT---AAATGGATTGTAACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQVVEFYLIVAA---V-AVISV-SV------------FWR-LLIASLIMLVGGYLGE---T------G--I-----------W----------------------EP------SIG-FTIGFIAWLYIIYEI-----F--K-GPAAKANAN--S-GNAAS-Q-Q-A-F-T-TI-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3]_KJ929663 [I-Gamma3] PRGD_OTU186_bf37b904491d493e9049e758e166807a gb|KJ929663| PRGD_OTU186_bf37b904491d493e9049e758e166807a, putative proteorhodopsin gene, partial cds. PRGD_OTU186_bf37b904491d493e9049e758e166807a, putative proteorhodopsin gene, partial cds. KJ929663 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Atlantic side (76.3333, 14.8833), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTCATAACCGTTCCATTGCAAGTGGTTGAGTTTTATTTGATTGTTGCCGCAGTAGCGGTAATTAGTGTGAGTGTATTTTGGCGATTATTAATTGCCTCATTGGTAATGCTAGTCGGTGGTTATTTAGGTGAAACAGGTATTTGGGATCCATCTGTTGGTTTTACCATTGGGTTTATCGCATGGTTATATATTATATATGAAATATTTAAAGGGCCTGCAGCAAAAGCAAATGCAAATAGCGGTAATGCAGCTAGCCAACAAGCATTTACAACGATTAAATGGATTGTAACCGTT FITVPLQVVEFYLIVAAVAVISVSVFWRLLIASLVMLVGGYLGETGIWDPSVGFTIGFIAWLYIIYEIFKGPAAKANANSGNAASQQAFTTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCATAACCGTTCCATTGCAAGTGGTTGAGTTTTATTTGATTGTTGCCGCA---------GTA---GCGGTAATTAGTGTG---AGTGTA------------------------------------TTTTGGCGA---TTATTAATTGCCTCATTGGTAATGCTAGTCGGTGGTTATTTAGGTGAA---------ACA------------------GGT------ATT---------------------------------TGG------------------------------------------------------------------GATCCA------------------TCTGTTGGT---TTTACCATTGGGTTTATCGCATGGTTATATATTATATATGAAATA---------------TTT------AAA---GGGCCTGCAGCAAAAGCAAATGCAAAT------AGC---GGTAATGCAGCTAGC---CAA---CAA---GCA---TTT---ACA---ACGATT---AAATGGATTGTAACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQVVEFYLIVAA---V-AVISV-SV------------FWR-LLIASLVMLVGGYLGE---T------G--I-----------W----------------------DP------SVG-FTIGFIAWLYIIYEI-----F--K-GPAAKANAN--S-GNAAS-Q-Q-A-F-T-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3]_KJ929829 [I-Gamma3] PRGD_OTU280_otuREP_209369802cd0ab02b29ce75ab8249134 gb|KJ929829| PRGD_OTU280_otuREP_209369802cd0ab02b29ce75ab8249134, putative proteorhodopsin gene, partial cds. PRGD_OTU280_otuREP_209369802cd0ab02b29ce75ab8249134, putative proteorhodopsin gene, partial cds. KJ929829 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTAATTACGGTTCCTCTGCAAGTTGTTGAATTTTATTTAATTATCGCAGCAGTTGCTATAGTAAGGGTTAGTGTGTTTTGGAGGTTATTGATTGCATCTATTGTCATGTTGGTCGGGGGCTATTTAGGGGAAACAGGCTTATGGTCGGCGTCTCTTGGCTTTGGAGTTGGTTTTATCGCATGGTTATACATTGTGTATGAAATCTTTTTTGGTGATACGGCAAAGGCCAATGCATCTAGTAACAATAAAGCAAGTCAGCAAGCATTTACAACCATAAAGTGGATAGTTACTGTA LITVPLQVVEFYLIIAAVAIVRVSVFWRLLIASIVMLVGGYLGETGLWSASLGFGVGFIAWLYIVYEIFFGDTAKANASSNNKASQQAFTTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACGGTTCCTCTGCAAGTTGTTGAATTTTATTTAATTATCGCAGCA---------GTT---GCTATAGTAAGGGTT---AGTGTG------------------------------------TTTTGGAGG---TTATTGATTGCATCTATTGTCATGTTGGTCGGGGGCTATTTAGGGGAA---------ACA------------------GGC------TTA---------------------------------TGG------------------------------------------------------------------TCGGCG------------------TCTCTTGGC---TTTGGAGTTGGTTTTATCGCATGGTTATACATTGTGTATGAAATC---------------TTT------TTT---GGTGATACGGCAAAGGCCAATGCATCT------AGT---AACAATAAAGCAAGT---CAG---CAA---GCA---TTT---ACA---ACCATA---AAGTGGATAGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQVVEFYLIIAA---V-AIVRV-SV------------FWR-LLIASIVMLVGGYLGE---T------G--L-----------W----------------------SA------SLG-FGVGFIAWLYIVYEI-----F--F-GDTAKANAS--S-NNKAS-Q-Q-A-F-T-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma3]_KJ929885 [I-Gamma3] PRGD_OTU336_otuREP_4a94f9c6d65a05a9f0960fbf0485368a gb|KJ929885| PRGD_OTU336_otuREP_4a94f9c6d65a05a9f0960fbf0485368a, putative proteorhodopsin gene, partial cds. PRGD_OTU336_otuREP_4a94f9c6d65a05a9f0960fbf0485368a, putative proteorhodopsin gene, partial cds. KJ929885 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 3]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 3 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-23.5956, 69.0419) TTAATTACAGTGCCATTGCAAATGGTAGAGTTTTATTTAATTATAGCTGCTGTTGCAATTGTTCGTGTAAGTGTATTCTGGAAATTGCTAGTTAGTTCATTAGTAATGTTGTTAGGTGGTTTTTTAGGCGAAGCTAGTATTATTGATGCTGGTGTAGGATTTACAATAGGTTTTATTGCTTGGTTATATATAATATATGAGATTTTCTTTGGTGAAACAGCTAAAGCTAATGCATCTAGCAACAATAAAGCAAGTCAAAAAGCTTTTAATACTATTAAATGGATTGTTACAGTT LITVPLQMVEFYLIIAAVAIVRVSVFWKLLVSSLVMLLGGFLGEASIIDAGVGFTIGFIAWLYIIYEIFFGETAKANASSNNKASQKAFNTIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCATTGCAAATGGTAGAGTTTTATTTAATTATAGCTGCT---------GTT---GCAATTGTTCGTGTA---AGTGTA------------------------------------TTCTGGAAA---TTGCTAGTTAGTTCATTAGTAATGTTGTTAGGTGGTTTTTTAGGCGAA---------GCT------------------AGT------ATT---------------------------------ATT------------------------------------------------------------------GATGCT------------------GGTGTAGGA---TTTACAATAGGTTTTATTGCTTGGTTATATATAATATATGAGATT---------------TTC------TTT---GGTGAAACAGCTAAAGCTAATGCATCT------AGC---AACAATAAAGCAAGT---CAA---AAA---GCT---TTT---AAT---ACTATT---AAATGGATTGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYLIIAA---V-AIVRV-SV------------FWK-LLVSSLVMLLGGFLGE---A------S--I-----------I----------------------DA------GVG-FTIGFIAWLYIIYEI-----F--F-GETAKANAS--S-NNKAS-Q-K-A-F-N-TI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I]_KJ929555 [I] PRGD_OTU152_0ba51c9c1b73f32cc090def1a1d86cc4 gb|KJ929555| PRGD_OTU152_0ba51c9c1b73f32cc090def1a1d86cc4, putative proteorhodopsin gene, partial cds. PRGD_OTU152_0ba51c9c1b73f32cc090def1a1d86cc4, putative proteorhodopsin gene, partial cds. KJ929555 [[proteorhodopsin super-cluster I]] proteorhodopsin super-cluster I proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) TTTATAACTGTTCCCTTACAAATTGTTGAGTTCTACCTTATTGTTGCTGCTGTGAGTGTTGTTAGAGCCCAAGTCTTTTGGAAGCTTCTTTTAGCCTCGCTTGTGATGCTTCTTTTTGGTTTCTTTGGAGAAGTTGGTTTTTTATCTACAACCTTAGGCTTTCTCGTTGGAACTCTTGCTTGGTTTTATATTATTTATGAGATCTTTCTTGGTGAAATCGCTCAAAAAAATAAAGACAGTGGTAACCTTGCTAGTCAAAGAGCTTTTAATACCATTAAGTGGATTGTAACAATT FITVPLQIVEFYLIVAAVSVVRAQVFWKLLLASLVMLLFGFFGEVGFLSTTLGFLVGTLAWFYIIYEIFLGEIAQKNKDSGNLASQRAFNTIKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATAACTGTTCCCTTACAAATTGTTGAGTTCTACCTTATTGTTGCTGCT---------GTG---AGTGTTGTTAGAGCC---CAAGTC------------------------------------TTTTGGAAG---CTTCTTTTAGCCTCGCTTGTGATGCTTCTTTTTGGTTTCTTTGGAGAA---------GTT------------------GGT------TTT---------------------------------TTA------------------------------------------------------------------TCTACA------------------ACCTTAGGC---TTTCTCGTTGGAACTCTTGCTTGGTTTTATATTATTTATGAGATC---------------TTT------CTT---GGTGAAATCGCTCAAAAAAATAAAGAC------AGT---GGTAACCTTGCTAGT---CAA---AGA---GCT---TTT---AAT---ACCATT---AAGTGGATTGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIVEFYLIVAA---V-SVVRA-QV------------FWK-LLLASLVMLLFGFFGE---V------G--F-----------L----------------------ST------TLG-FLVGTLAWFYIIYEI-----F--L-GEIAQKNKD--S-GNLAS-Q-R-A-F-N-TI-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [I]_KJ929557 [I] PRGD_OTU152_f3cae6617ee1e91bac6635be7a5256ae gb|KJ929557| PRGD_OTU152_f3cae6617ee1e91bac6635be7a5256ae, putative proteorhodopsin gene, partial cds. PRGD_OTU152_f3cae6617ee1e91bac6635be7a5256ae, putative proteorhodopsin gene, partial cds. KJ929557 [[proteorhodopsin super-cluster I]] proteorhodopsin super-cluster I proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTTATAACTGTTCCCTTACAAATTATTGAGTTCTACCTTATTGTTGCTGCTGTAAGTGTTGTTAGAGCTCAAGTCTTTTGGAAGCTTCTTTTAGCCTCGCTTGTGATGCTTCTTTTTGGTTTCTTTGGAGAAGTTGGTTTTTTATCTACAACCTTAGGCTTTCTCGTTGGAACTCTTGCTTGGTTTTATATTATTTATGAGATCTTTCTTGGTGAAATCGCTCAAAAAAATAAAGACAGTGGTAACCTTGCTAGTCAAAGAGCTTTTAATACCATTAAGTGGATTGTAACAATT FITVPLQIIEFYLIVAAVSVVRAQVFWKLLLASLVMLLFGFFGEVGFLSTTLGFLVGTLAWFYIIYEIFLGEIAQKNKDSGNLASQRAFNTIKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATAACTGTTCCCTTACAAATTATTGAGTTCTACCTTATTGTTGCTGCT---------GTA---AGTGTTGTTAGAGCT---CAAGTC------------------------------------TTTTGGAAG---CTTCTTTTAGCCTCGCTTGTGATGCTTCTTTTTGGTTTCTTTGGAGAA---------GTT------------------GGT------TTT---------------------------------TTA------------------------------------------------------------------TCTACA------------------ACCTTAGGC---TTTCTCGTTGGAACTCTTGCTTGGTTTTATATTATTTATGAGATC---------------TTT------CTT---GGTGAAATCGCTCAAAAAAATAAAGAC------AGT---GGTAACCTTGCTAGT---CAA---AGA---GCT---TTT---AAT---ACCATT---AAGTGGATTGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIIEFYLIVAA---V-SVVRA-QV------------FWK-LLLASLVMLLFGFFGE---V------G--F-----------L----------------------ST------TLG-FLVGTLAWFYIIYEI-----F--L-GEIAQKNKD--S-GNLAS-Q-R-A-F-N-TI-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [I]_KJ929554 [I] PRGD_OTU152_otuREP_5e1b3c8a13353574ebea75f6b10d3690 gb|KJ929554| PRGD_OTU152_otuREP_5e1b3c8a13353574ebea75f6b10d3690, putative proteorhodopsin gene, partial cds. PRGD_OTU152_otuREP_5e1b3c8a13353574ebea75f6b10d3690, putative proteorhodopsin gene, partial cds. KJ929554 [[proteorhodopsin super-cluster I]] proteorhodopsin super-cluster I proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Indian Ocean (-33.28, 45.35) TTTATAACTGTTCCCTTACAAATTATTGAGTTCTACCTTATTGTTGCTGCTGTAAGTGTTGTTAGAGCTCAAGTCTTTTGGAAGCTTCTTATAGCCTCGCTTGTAATGCTTCTTTTTGGTTTCTTAGGAGAAGTTGGTCTTTTATCTACAGCCTTAGGCTTTATCGTTGGAACTCTTGCTTGGTTTTATATTATTTATGAGATCTTTCTCGGTGAAATCGCTCAAAAAAATAAAGACAGTGGCAACCTTGCAAGTCAAAGAGCTTTTAATACCATTAAGTGGATTGTAACAATT FITVPLQIIEFYLIVAAVSVVRAQVFWKLLIASLVMLLFGFLGEVGLLSTALGFIVGTLAWFYIIYEIFLGEIAQKNKDSGNLASQRAFNTIKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATAACTGTTCCCTTACAAATTATTGAGTTCTACCTTATTGTTGCTGCT---------GTA---AGTGTTGTTAGAGCT---CAAGTC------------------------------------TTTTGGAAG---CTTCTTATAGCCTCGCTTGTAATGCTTCTTTTTGGTTTCTTAGGAGAA---------GTT------------------GGT------CTT---------------------------------TTA------------------------------------------------------------------TCTACA------------------GCCTTAGGC---TTTATCGTTGGAACTCTTGCTTGGTTTTATATTATTTATGAGATC---------------TTT------CTC---GGTGAAATCGCTCAAAAAAATAAAGAC------AGT---GGCAACCTTGCAAGT---CAA---AGA---GCT---TTT---AAT---ACCATT---AAGTGGATTGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIIEFYLIVAA---V-SVVRA-QV------------FWK-LLIASLVMLLFGFLGE---V------G--L-----------L----------------------ST------ALG-FIVGTLAWFYIIYEI-----F--L-GEIAQKNKD--S-GNLAS-Q-R-A-F-N-TI-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [I]_KJ929556 [I] PRGD_OTU152_ce564b979ba8f7c868c5db488014a27f gb|KJ929556| PRGD_OTU152_ce564b979ba8f7c868c5db488014a27f, putative proteorhodopsin gene, partial cds. PRGD_OTU152_ce564b979ba8f7c868c5db488014a27f, putative proteorhodopsin gene, partial cds. KJ929556 [[proteorhodopsin super-cluster I]] proteorhodopsin super-cluster I proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTTATTACTGTTCCCTTACAAATTGTTGAGTTCTACCTTATTGTTGCTGCTGTGAGTGTTGTTAGAGCTCAAGTCTTTTGGAAGCTTCTTACAGCTTCGCTTGTAATGCTTCTTTTTGGTTTCTTAGGAGAAGTTGGTCTTTTATCTACAGCCGTAGGCTTTATCGTTGGAACTCTTGCTTGGTTTTATATTATTTATGAGATCTTTCTTGGTGAAATCGCTCAAAAAAATAAAGACAGTGGTAACCTTGCTAGTCAAAGAGCTTTTAATACCATTAAGTGGATTGTAACAATT FITVPLQIVEFYLIVAAVSVVRAQVFWKLLTASLVMLLFGFLGEVGLLSTAVGFIVGTLAWFYIIYEIFLGEIAQKNKDSGNLASQRAFNTIKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATTACTGTTCCCTTACAAATTGTTGAGTTCTACCTTATTGTTGCTGCT---------GTG---AGTGTTGTTAGAGCT---CAAGTC------------------------------------TTTTGGAAG---CTTCTTACAGCTTCGCTTGTAATGCTTCTTTTTGGTTTCTTAGGAGAA---------GTT------------------GGT------CTT---------------------------------TTA------------------------------------------------------------------TCTACA------------------GCCGTAGGC---TTTATCGTTGGAACTCTTGCTTGGTTTTATATTATTTATGAGATC---------------TTT------CTT---GGTGAAATCGCTCAAAAAAATAAAGAC------AGT---GGTAACCTTGCTAGT---CAA---AGA---GCT---TTT---AAT---ACCATT---AAGTGGATTGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIVEFYLIVAA---V-SVVRA-QV------------FWK-LLTASLVMLLFGFLGE---V------G--L-----------L----------------------ST------AVG-FIVGTLAWFYIIYEI-----F--L-GEIAQKNKD--S-GNLAS-Q-R-A-F-N-TI-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [I]_KJ929869 [I] PRGD_OTU320_otuREP_aefe3154f93eb834e1024861a16e566f gb|KJ929869| PRGD_OTU320_otuREP_aefe3154f93eb834e1024861a16e566f, putative proteorhodopsin gene, partial cds. PRGD_OTU320_otuREP_aefe3154f93eb834e1024861a16e566f, putative proteorhodopsin gene, partial cds. KJ929869 [[proteorhodopsin super-cluster I]] proteorhodopsin super-cluster I proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTTATAACTGTTCCCTTACAAATTATTGAGTTCTACCTTATTGTTGCTGCTGTAAGTGTTGTTAGAGCTCAAGTCTTTTGGAAGCTTCTTATAGCCTCGCTTGTAATGCTTCTTTTTGGTTTCTTAGGAGAAGTTGGTCTTTTATCTACAGCCTTAGGCTTTATCGTTGGAACTCTTGCTTGGTTTTATATTATTTACGAGATTTTTAGAGGCGAGGCCGCAATCCTCAATGAAAATAGCGGTAACGAATCTGGTCAGTTTGCATTTCAATCTTTAAAATGGATTGTAACTGTG FITVPLQIIEFYLIVAAVSVVRAQVFWKLLIASLVMLLFGFLGEVGLLSTALGFIVGTLAWFYIIYEIFRGEAAILNENSGNESGQFAFQSLKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATAACTGTTCCCTTACAAATTATTGAGTTCTACCTTATTGTTGCTGCT---------GTA---AGTGTTGTTAGAGCT---CAAGTC------------------------------------TTTTGGAAG---CTTCTTATAGCCTCGCTTGTAATGCTTCTTTTTGGTTTCTTAGGAGAA---------GTT------------------GGT------CTT---------------------------------TTA------------------------------------------------------------------TCTACA------------------GCCTTAGGC---TTTATCGTTGGAACTCTTGCTTGGTTTTATATTATTTACGAGATT---------------TTT------AGA---GGCGAGGCCGCAATCCTCAATGAAAAT------AGC---GGTAACGAATCTGGT---CAG---TTT---GCA---TTT---CAA---TCTTTA---AAATGGATTGTAACTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIIEFYLIVAA---V-SVVRA-QV------------FWK-LLIASLVMLLFGFLGE---V------G--L-----------L----------------------ST------ALG-FIVGTLAWFYIIYEI-----F--R-GEAAILNEN--S-GNESG-Q-F-A-F-Q-SL-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-viral/Himb114]_KJ929917 [I-viral/Himb114] PRGD_OTU368_otuREP_7d852e5cd6fd58b333af86f596f98334 gb|KJ929917| PRGD_OTU368_otuREP_7d852e5cd6fd58b333af86f596f98334, putative proteorhodopsin gene, partial cds. PRGD_OTU368_otuREP_7d852e5cd6fd58b333af86f596f98334, putative proteorhodopsin gene, partial cds. KJ929917 [[proteorhodopsin super-cluster I/Viral-like Himb114 Alphaproteobacterial-like cluster]] proteorhodopsin super-cluster I Viral-like Himb114 Alphaproteobacterial-like cluster viral rhodopsin proton pump na ; V108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) GCCATTACAACACCTATCATGTTGTTGGTATTGGTTTTGGCATTTTTATACAACAATAACAAGGGTGCAATGAAATTCAGCTCATATTTGGTCATTTTGTTTTTCAATTACGTCATGTTGGGTTTCGGTTATGTGGGTGAAATCGGAGGAATGGACAAAGGATTGGCCAATACATTCGGTTTTGCTGGTTTCGTAGGTCTGTATTATTACATTTACAAGAATTAT AITTPIMLLVLVLAFLYNNNKGAMKFSSYLVILFFNYVMLGFGYVGEIGGMDKGLANTFGFAGFVGLYYYIYKNY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCATTACAACACCTATCATGTTGTTGGTATTGGTTTTGGCATTTTTATAC---------AAC---------AATAACAAG---GGTGCA---------------------ATGAAATTCAGCTCATATTTGGTC---ATTTTGTTTTTCAATTACGTCATGTTGGGTTTCGGTTATGTGGGTGAA---------ATC---------------------------------------------------------------------------------------GGA---------GGA---------------------------ATGGACAAA------------------GGATTGGCC---AATACATTCGGTTTTGCTGGTTTCGTAGGTCTGTATTATTACATT------------------------------------------------------------------------------------------------------------------------------TACAAGAATTAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AITTPIMLLVLVLAFLY---N---NNK-GA-------MKFSSYLV-ILFFNYVMLGFGYVGE---I-----------------------------G---G---------MDK------GLA-NTFGFAGFVGLYYYI------------------------------------------YKNY---------------------------------------------------------------------------------------------------------------------------------- [I-viral/Himb114]_KJ929891 [I-viral/Himb114] PRGD_OTU342_otuREP_d797ddd21a7c7f3d0046d588a4d19eb3 gb|KJ929891| PRGD_OTU342_otuREP_d797ddd21a7c7f3d0046d588a4d19eb3, putative proteorhodopsin gene, partial cds. PRGD_OTU342_otuREP_d797ddd21a7c7f3d0046d588a4d19eb3, putative proteorhodopsin gene, partial cds. KJ929891 [[proteorhodopsin super-cluster I/Viral-like Himb114 Alphaproteobacterial-like cluster]] proteorhodopsin super-cluster I Viral-like Himb114 Alphaproteobacterial-like cluster viral rhodopsin proton pump G97 ; na light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), Indian Ocean (-33.28, 45.35) ATGAGCGCGGCATCATTTATCTCTATGGCTGGCATTATTTCTTTTATTGGCCGAGATGGCTCTGTGTACCTGCTCGGCTGGACCGGCGGCTATGTGCTTTTAGCCTTGTTACTAGCGCCTTACCTGCGCAAGTTTGGACGTTTTACCGTGCCTGATTTCATCGGTGAACGCTATTATTCTCAGACGGCCCGCATTGTTGCAGTCATCTGTTTGATTTTTGTTTCTTTTACCTATGTCGCTGGCCAAATGCGT MSAASFISMAGIISFIGRDGSVYLLGWTGGYVLLALLLAPYLRKFGRFTVPDFIGERYYSQTARIVAVICLIFVSFTYVAGQMR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAGCGCGGCATCATTTATCTCTATGGCTGGCATTATTTCTTTTATTGGCCGAGATGGCTCTGTGTACCTG---------------------------------------------------------------------------------------------------CTCGGCTGGACCGGCGGCTATGTGCTTTTAGCCTTGTTACTAGCGCCTTACCTG---------------------------------------------------------------CGCAAG------------------------------------TTTGGACGT------------------------TTTACCGTGCCTGATTTCATCGGTGAACGCTATTATTCT------------------------------------------------------------------------------------------------------------------------------------------------------------CAGACGGCC---CGCATTGTTGCAGTCATCTGTTTGATTTTTGTTTCTTTTACCTAT---------------GTC------GCT---GGCCAAATGCGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------MSAASFISMAGIISFIGRDGSVYL---------------------------------LGWTGGYVLLALLLAPYL---------------------RK------------FGR--------FTVPDFIGERYYS----------------------------------------------------QTA-RIVAVICLIFVSFTY-----V--A-GQMR------------------------------------------------------------------------------------------------------------------------------------------------------------------ [I-viral/Himb114]_KJ929821 [I-viral/Himb114] PRGD_OTU272_otuREP_200a7b4a4e81bb11a8b8548063435998 gb|KJ929821| PRGD_OTU272_otuREP_200a7b4a4e81bb11a8b8548063435998, putative proteorhodopsin gene, partial cds. PRGD_OTU272_otuREP_200a7b4a4e81bb11a8b8548063435998, putative proteorhodopsin gene, partial cds. KJ929821 [[proteorhodopsin super-cluster I/Viral-like Himb114 Alphaproteobacterial-like cluster]] proteorhodopsin super-cluster I Viral-like Himb114 Alphaproteobacterial-like cluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTCTAACGGTTCCGCTAATGTGCATCGAGTTCTACCTAATTTTAAAAGCCATCGGGCATGTATCCCGCGGGGTACTGCATCGGTTGTTTGGGTACAGTTGCGGGATGCTCGTGTTTGGCTACCTGGGCGAAGCCATTATTTTGGACCCCATCATCGCCTTTGGCATTGGCATGGCATTTTGGGGACTCATTATTTACGAAGTGTTTGCAGGTGAAGCAGCGCAATGCATGGCCAGATCCGGCCACACCAAACTAAAATCCACGTTTAAAACGTTGCGACTTTTTATCCTGATT ILTVPLMCIEFYLILKAIGHVSRGVLHRLFGYSCGMLVFGYLGEAIILDPIIAFGIGMAFWGLIIYEVFAGEAAQCMARSGHTKLKSTFKTLRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTAACGGTTCCGCTAATGTGCATCGAGTTCTACCTAATTTTAAAAGCC---------ATC---GGGCATGTATCCCGC---GGGGTA------------------------------------CTGCATCGG---TTGTTTGGGTACAGTTGCGGGATGCTCGTGTTTGGCTACCTGGGCGAA---------GCC------------------ATT------ATT---------------------------------TTG------------------------------------------------------------------GACCCC------------------ATCATCGCC---TTTGGCATTGGCATGGCATTTTGGGGACTCATTATTTACGAAGTG---------------TTT------GCA---GGTGAAGCAGCGCAATGCATGGCCAGA------TCC---GGCCACACCAAACTA---AAA---TCC---ACG---TTT---AAA---ACGTTG---CGACTTTTTATCCTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCIEFYLILKA---I-GHVSR-GV------------LHR-LFGYSCGMLVFGYLGE---A------I--I-----------L----------------------DP------IIA-FGIGMAFWGLIIYEV-----F--A-GEAAQCMAR--S-GHTKL-K-S-T-F-K-TL-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-viral/Himb114]_KJ929907 [I-viral/Himb114] PRGD_OTU358_otuREP_ce58fada990d28976e16c5dc1e29889d gb|KJ929907| PRGD_OTU358_otuREP_ce58fada990d28976e16c5dc1e29889d, putative proteorhodopsin gene, partial cds. PRGD_OTU358_otuREP_ce58fada990d28976e16c5dc1e29889d, putative proteorhodopsin gene, partial cds. KJ929907 [[proteorhodopsin super-cluster I/Viral-like Himb114 Alphaproteobacterial-like cluster]] proteorhodopsin super-cluster I Viral-like Himb114 Alphaproteobacterial-like cluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683) CTACTAACGGTTCCACTGATGTGTATTGAATTCTATCTAATTCTACGCGCATTGGGGCATGGATCACGACATATACTATATAGGCTGTTTGGTTATAGCGTAGGGATGCTACTATTTGGTTACCTAGGCGAGACATTGCTACTCGATCCGATGATTGCTTTTGGAATTGGACTCATATTTTATGGGTTAATTTTATATGAAGTATTTAAAGGCGAGGCAGCAAGAGCCATGGAACTATCTAGTCATTTTAAGCTAAAGTCATCATTTAAAATATTGCGATTATTTGTCTTAATT LLTVPLMCIEFYLILRALGHGSRHILYRLFGYSVGMLLFGYLGETLLLDPMIAFGIGLIFYGLILYEVFKGEAARAMELSSHFKLKSSFKILRLFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTAACGGTTCCACTGATGTGTATTGAATTCTATCTAATTCTACGCGCA---------TTG---GGGCATGGATCACGA---CATATA------------------------------------CTATATAGG---CTGTTTGGTTATAGCGTAGGGATGCTACTATTTGGTTACCTAGGCGAG---------ACA------------------TTG------CTA---------------------------------CTC------------------------------------------------------------------GATCCG------------------ATGATTGCT---TTTGGAATTGGACTCATATTTTATGGGTTAATTTTATATGAAGTA---------------TTT------AAA---GGCGAGGCAGCAAGAGCCATGGAACTA------TCT---AGTCATTTTAAGCTA---AAG---TCA---TCA---TTT---AAA---ATATTG---CGATTATTTGTCTTAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLMCIEFYLILRA---L-GHGSR-HI------------LYR-LFGYSVGMLLFGYLGE---T------L--L-----------L----------------------DP------MIA-FGIGLIFYGLILYEV-----F--K-GEAARAMEL--S-SHFKL-K-S-S-F-K-IL-RLFVLI-------------------------------------------------------------------------------------------------------------------------------- [I-viral/Himb114]_KJ929800 [I-viral/Himb114] PRGD_OTU252_otuREP_0de12a39e64215f37fd3a3ca5a489bc6 gb|KJ929800| PRGD_OTU252_otuREP_0de12a39e64215f37fd3a3ca5a489bc6, putative proteorhodopsin gene, partial cds. PRGD_OTU252_otuREP_0de12a39e64215f37fd3a3ca5a489bc6, putative proteorhodopsin gene, partial cds. KJ929800 [[proteorhodopsin super-cluster I/Viral-like Himb114 Alphaproteobacterial-like cluster]] proteorhodopsin super-cluster I Viral-like Himb114 Alphaproteobacterial-like cluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATTACAGTTCCTCTTCAAATGGTCGAATTCTACATTGTTCTTGCGGCTGTAACAGCTGTAAGTGCAGGAGTTCTTCACAGACTTTTAGGTTTTTCAGTTTTAATGTTAGTTTTCGGTTACTTAGGTGAAACTGGCGCAGTAGCAGCAATCAATTCAACAACTGGTTTTGTTGGTGGTATGCTATGCTGGGGACTAATGTTAAGAGAAATCTGGTCTGGAGAAGCAGCTCAAGTGAATGCTGGATCTAAAAATGCAGCAGCTCACTATGCTTTCGATGGAATGAAAAAAATTGTTACTTTT LITVPLQMVEFYIVLAAVTAVSAGVLHRLLGFSVLMLVFGYLGETGAVAAINSTTGFVGGMLCWGLMLREIWSGEAAQVNAGSKNAAAHYAFDGMKKIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCTCTTCAAATGGTCGAATTCTACATTGTTCTTGCGGCT---------GTA---ACAGCTGTAAGTGCA---GGAGTT------------------------------------CTTCACAGA---CTTTTAGGTTTTTCAGTTTTAATGTTAGTTTTCGGTTACTTAGGTGAA---------ACT------------------GGC------GCAGTA------------------------GCAGCAATC------------------------------------------------------------------AATTCA------------------ACAACTGGT---TTTGTTGGTGGTATGCTATGCTGGGGACTAATGTTAAGAGAAATC---------------TGG------TCT---GGAGAAGCAGCTCAAGTGAATGCTGGA------TCT---AAAAATGCAGCAGCT---CAC---TAT---GCT---TTC---GAT---GGAATG---AAAAAAATTGTTACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYIVLAA---V-TAVSA-GV------------LHR-LLGFSVLMLVFGYLGE---T------G--AV--------AAI----------------------NS------TTG-FVGGMLCWGLMLREI-----W--S-GEAAQVNAG--S-KNAAA-H-Y-A-F-D-GM-KKIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-viral/Himb114]_KJ929801 [I-viral/Himb114] PRGD_OTU252_a4da7262700bea0501b4f290eb299425 gb|KJ929801| PRGD_OTU252_a4da7262700bea0501b4f290eb299425, putative proteorhodopsin gene, partial cds. PRGD_OTU252_a4da7262700bea0501b4f290eb299425, putative proteorhodopsin gene, partial cds. KJ929801 [[proteorhodopsin super-cluster I/Viral-like Himb114 Alphaproteobacterial-like cluster]] proteorhodopsin super-cluster I Viral-like Himb114 Alphaproteobacterial-like cluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Mediterranean Sea (38.6308, 7.9097) TTAATTACTGTTCCTCTTCAAATGGTCGAATTTTACATTGTTCTTGCTGCTGTTACAGCTGTAAGTGCAGGTGTATTACACAGACTTTTAGGTTTTTCTGTTTTAATGTTAGTCGGGGGTTACCTCGGTGAAACTGGTGTAGTTGCAGCAATTAGCCCTACTGTTGGATTTGCAATTGGTATGGTATGCTGGGGACTTATGCTAAGAGAAATCTGGTCAGGTGAAGCTGCTGAAGTTAACGCTAAAGCAAGTGCTGCAGGTCAGTACGCTTTCGACGGAATGAAAAAAATTGTAACATTT LITVPLQMVEFYIVLAAVTAVSAGVLHRLLGFSVLMLVGGYLGETGVVAAISPTVGFAIGMVCWGLMLREIWSGEAAEVNAKASAAGQYAFDGMKKIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTTCCTCTTCAAATGGTCGAATTTTACATTGTTCTTGCTGCT---------GTT---ACAGCTGTAAGTGCA---GGTGTA------------------------------------TTACACAGA---CTTTTAGGTTTTTCTGTTTTAATGTTAGTCGGGGGTTACCTCGGTGAA---------ACT------------------GGT------GTAGTT------------------------GCAGCAATT------------------------------------------------------------------AGCCCT------------------ACTGTTGGA---TTTGCAATTGGTATGGTATGCTGGGGACTTATGCTAAGAGAAATC---------------TGG------TCA---GGTGAAGCTGCTGAAGTTAACGCTAAA------GCA------AGTGCTGCAGGT---CAG---TAC---GCT---TTC---GAC---GGAATG---AAAAAAATTGTAACATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMVEFYIVLAA---V-TAVSA-GV------------LHR-LLGFSVLMLVGGYLGE---T------G--VV--------AAI----------------------SP------TVG-FAIGMVCWGLMLREI-----W--S-GEAAEVNAK--A--SAAG-Q-Y-A-F-D-GM-KKIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-viral/Himb114]_KJ929714 [I-viral/Himb114] PRGD_OTU209_otuREP_3349e2978548f126a9f5d18831ad7e1e gb|KJ929714| PRGD_OTU209_otuREP_3349e2978548f126a9f5d18831ad7e1e, putative proteorhodopsin gene, partial cds. PRGD_OTU209_otuREP_3349e2978548f126a9f5d18831ad7e1e, putative proteorhodopsin gene, partial cds. KJ929714 [[proteorhodopsin super-cluster I/Viral-like Himb114 Alphaproteobacterial-like cluster]] proteorhodopsin super-cluster I Viral-like Himb114 Alphaproteobacterial-like cluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683) TTTTTGACGGTTCCCCTCCAGTTTTTGGAGTTTTACTTTATTTTAGCTGCGGTATCTAGAGTATCAGCAGGGTTCTTTTGGAAGCTTCTAGTCGCATCAATGGTTATGTTGGTGTCAGGATACGTAGGTGAGGCTGGTTTATATGATTCAACACAATCATTTGCTGTGGGCATGTTAGCCTGGTTCTATATTTTATACTTAATCTGGTTTGGACAAGGTGTGAAAGCAAAAAATGCATCGATGAATGCTTCTGCTAATAAGGCCTATAATGCAATACGCTATATTGTGACAATT FLTVPLQFLEFYFILAAVSRVSAGFFWKLLVASMVMLVSGYVGEAGLYDSTQSFAVGMLAWFYILYLIWFGQGVKAKNASMNASANKAYNAIRYIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTGACGGTTCCCCTCCAGTTTTTGGAGTTTTACTTTATTTTAGCTGCG---------GTA---TCTAGAGTATCAGCA---GGGTTC------------------------------------TTTTGGAAG---CTTCTAGTCGCATCAATGGTTATGTTGGTGTCAGGATACGTAGGTGAG---------GCT------------------GGT------TTA---------------------------------TAT------------------------------------------------------------------GATTCA------------------ACACAATCA---TTTGCTGTGGGCATGTTAGCCTGGTTCTATATTTTATACTTAATC---------------TGG------TTT---GGACAAGGTGTGAAAGCAAAAAATGCA------TCG---ATGAATGCTTCTGCT---AAT---AAG---GCC---TAT---AAT---GCAATA---CGCTATATTGTGACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FLTVPLQFLEFYFILAA---V-SRVSA-GF------------FWK-LLVASMVMLVSGYVGE---A------G--L-----------Y----------------------DS------TQS-FAVGMLAWFYILYLI-----W--F-GQGVKAKNA--S-MNASA-N-K-A-Y-N-AI-RYIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-viral/Himb114]_KJ929886 [I-viral/Himb114] PRGD_OTU337_otuREP_e6a29f9d5f2c03056c9a8d84e76d5810 gb|KJ929886| PRGD_OTU337_otuREP_e6a29f9d5f2c03056c9a8d84e76d5810, putative proteorhodopsin gene, partial cds. PRGD_OTU337_otuREP_e6a29f9d5f2c03056c9a8d84e76d5810, putative proteorhodopsin gene, partial cds. KJ929886 [[proteorhodopsin super-cluster I/Viral-like Himb114 Alphaproteobacterial-like cluster]] proteorhodopsin super-cluster I Viral-like Himb114 Alphaproteobacterial-like cluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTCTTGACTGTTCCATTGCAGTTTTTGGAGTTTTATTTCATTCTCTCAGCTGTGTCACGTGTCTCATCTAGTTTCTTTTGGAAGTTGCTGGTAGCCTCGATTGTTATGTTGGGTGCAGGTTATGCTGGTGAGGCTGCGATGTATGATGCTTTATGGTCCTATGTGGTGGGTATGCTTGCTTGGATCTATATATTATACCTCATTTGGTTTGGTCAAGGGGCTAAGTCTAAGAGCTCATCAATGAATGCATCAGCTCAGATGGCGTATAATGCCATTCGCTTTATTGTGACATTT FLTVPLQFLEFYFILSAVSRVSSSFFWKLLVASIVMLGAGYAGEAAMYDALWSYVVGMLAWIYILYLIWFGQGAKSKSSSMNASAQMAYNAIRFIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTGACTGTTCCATTGCAGTTTTTGGAGTTTTATTTCATTCTCTCAGCT---------GTG---TCACGTGTCTCATCT---AGTTTC------------------------------------TTTTGGAAG---TTGCTGGTAGCCTCGATTGTTATGTTGGGTGCAGGTTATGCTGGTGAG---------GCT------------------GCG------ATG---------------------------------TAT------------------------------------------------------------------GATGCT------------------TTATGGTCC---TATGTGGTGGGTATGCTTGCTTGGATCTATATATTATACCTCATT---------------TGG------TTT---GGTCAAGGGGCTAAGTCTAAGAGCTCA------TCA---ATGAATGCATCAGCT---CAG---ATG---GCG---TAT---AAT---GCCATT---CGCTTTATTGTGACATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FLTVPLQFLEFYFILSA---V-SRVSS-SF------------FWK-LLVASIVMLGAGYAGE---A------A--M-----------Y----------------------DA------LWS-YVVGMLAWIYILYLI-----W--F-GQGAKSKSS--S-MNASA-Q-M-A-Y-N-AI-RFIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-viral/Himb114]_KJ929715 [I-viral/Himb114] PRGD_OTU209_a82a8eaa6a67eddc4ae4c83a01c47b83 gb|KJ929715| PRGD_OTU209_a82a8eaa6a67eddc4ae4c83a01c47b83, putative proteorhodopsin gene, partial cds. PRGD_OTU209_a82a8eaa6a67eddc4ae4c83a01c47b83, putative proteorhodopsin gene, partial cds. KJ929715 [[proteorhodopsin super-cluster I/Viral-like Himb114 Alphaproteobacterial-like cluster]] proteorhodopsin super-cluster I Viral-like Himb114 Alphaproteobacterial-like cluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.935 18.508 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (33.935, 18.508), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTTTTAACAGTACCTCTACAGTTTGTGGAGTTTTACTTCATTCTTGCTGCTGTATCTCGGGTTTCCGCAGGATTCTTTTGGAAATTGTTGGTGGCTTCAATGGTGATGCTGATATCAGGTTATGTTGGTGAAACGGCTATGTACGACCCAGGGCAATCGTTTGCACTAGGGATGTTGGCATGGTTTTACATACTATATCTCATTTGGTTTGGGGATGGTGTTAAAGCTAAGAAGGCTTCAATGAATGCTTCTGCAAACATGGCTTATAATGCGATTCGTTACATTGTTACATTT FLTVPLQFVEFYFILAAVSRVSAGFFWKLLVASMVMLISGYVGETAMYDPGQSFALGMLAWFYILYLIWFGDGVKAKKASMNASANMAYNAIRYIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTAACAGTACCTCTACAGTTTGTGGAGTTTTACTTCATTCTTGCTGCT---------GTA---TCTCGGGTTTCCGCA---GGATTC------------------------------------TTTTGGAAA---TTGTTGGTGGCTTCAATGGTGATGCTGATATCAGGTTATGTTGGTGAA---------ACG------------------GCT------ATG---------------------------------TAC------------------------------------------------------------------GACCCA------------------GGGCAATCG---TTTGCACTAGGGATGTTGGCATGGTTTTACATACTATATCTCATT---------------TGG------TTT---GGGGATGGTGTTAAAGCTAAGAAGGCT------TCA---ATGAATGCTTCTGCA---AAC---ATG---GCT---TAT---AAT---GCGATT---CGTTACATTGTTACATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FLTVPLQFVEFYFILAA---V-SRVSA-GF------------FWK-LLVASMVMLISGYVGE---T------A--M-----------Y----------------------DP------GQS-FALGMLAWFYILYLI-----W--F-GDGVKAKKA--S-MNASA-N-M-A-Y-N-AI-RYIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-viral/Himb114]_KJ929892 [I-viral/Himb114] PRGD_OTU343_otuREP_52de4b947d596e5a888214ba0d1fd744 gb|KJ929892| PRGD_OTU343_otuREP_52de4b947d596e5a888214ba0d1fd744, putative proteorhodopsin gene, partial cds. PRGD_OTU343_otuREP_52de4b947d596e5a888214ba0d1fd744, putative proteorhodopsin gene, partial cds. KJ929892 [[proteorhodopsin super-cluster I/Viral-like Himb114 Alphaproteobacterial-like cluster]] proteorhodopsin super-cluster I Viral-like Himb114 Alphaproteobacterial-like cluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTTTTGACCGTGCCACTTCAGTTTGTTGAGTTCTACTTCATTTTATCGGCAGTATCTAGAGTATCGGTTAGCTTCTTTTGGAAGTTGTTGGTTGCCTCACTTGTAATGCTTATAGCTGGTTATGTTGGTGAAGCTTCGATGTATGACGCACTATGGTCTTACAACATAGGTATGGCTGCATGGATTTATATTTTGTATCTTATTTGGTTCGGGCAGGGTGCTAAAGCTAAAACGGCTTCTATGAATGCTTCAGCAAATATGGCATTTCAGGCGATAAGACTGATTGTGACTTTT FLTVPLQFVEFYFILSAVSRVSVSFFWKLLVASLVMLIAGYVGEASMYDALWSYNIGMAAWIYILYLIWFGQGAKAKTASMNASANMAFQAIRLIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTGACCGTGCCACTTCAGTTTGTTGAGTTCTACTTCATTTTATCGGCA---------GTA---TCTAGAGTATCGGTT---AGCTTC------------------------------------TTTTGGAAG---TTGTTGGTTGCCTCACTTGTAATGCTTATAGCTGGTTATGTTGGTGAA---------GCT------------------TCG------ATG---------------------------------TAT------------------------------------------------------------------GACGCA------------------CTATGGTCT---TACAACATAGGTATGGCTGCATGGATTTATATTTTGTATCTTATT---------------TGG------TTC---GGGCAGGGTGCTAAAGCTAAAACGGCT------TCT---ATGAATGCTTCAGCA---AAT---ATG---GCA---TTT---CAG---GCGATA---AGACTGATTGTGACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FLTVPLQFVEFYFILSA---V-SRVSV-SF------------FWK-LLVASLVMLIAGYVGE---A------S--M-----------Y----------------------DA------LWS-YNIGMAAWIYILYLI-----W--F-GQGAKAKTA--S-MNASA-N-M-A-F-Q-AI-RLIVTF-------------------------------------------------------------------------------------------------------------------------------- [I-viral/Himb114]_KJ929879 [I-viral/Himb114] PRGD_OTU330_otuREP_62bcb7f3096ac403164690f08012a716 gb|KJ929879| PRGD_OTU330_otuREP_62bcb7f3096ac403164690f08012a716, putative proteorhodopsin gene, partial cds. PRGD_OTU330_otuREP_62bcb7f3096ac403164690f08012a716, putative proteorhodopsin gene, partial cds. KJ929879 [[proteorhodopsin super-cluster I/Viral-like Himb114 Alphaproteobacterial-like cluster]] proteorhodopsin super-cluster I Viral-like Himb114 Alphaproteobacterial-like cluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATTACCGTCCCCCTTCAGATCATCGAGTTCTACTTGATTTTGTGTGCCGTTGGCTACAAAAAAATCGCACTGTTCTGGAAACTGCTCATAGCCTCTACACTAATGCTGGTTTTTGGCTATATTGGCGAAGCAAACATGGGAAGCCCCACACTGTTCTTCATACTTGGGATGGCTGCATGGTTGTATATTCTCTTTGAGTTATTCTTTGGAGAAGTCGCTGCCGCAACACATGAATCACAAAAAGCATCCTGTGCGCTTGCAGTCGTTAGTCTAAAATGGATAGTCACTGTT LITVPLQIIEFYLILCAVGYKKIALFWKLLIASTLMLVFGYIGEANMGSPTLFFILGMAAWLYILFELFFGEVAAATHESQKASCALAVVSLKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACCGTCCCCCTTCAGATCATCGAGTTCTACTTGATTTTGTGTGCC---------GTT---GGCTACAAAAAAATC---GCACTG------------------------------------TTCTGGAAA---CTGCTCATAGCCTCTACACTAATGCTGGTTTTTGGCTATATTGGCGAA---------GCA------------------AAC------ATG---------------------------------GGA------------------------------------------------------------------AGCCCC------------------ACACTGTTC---TTCATACTTGGGATGGCTGCATGGTTGTATATTCTCTTTGAGTTA---------------TTC------TTT---GGAGAAGTCGCTGCCGCAACACATGAA------TCA---CAAAAAGCATCCTGT---GCG---CTT---GCA---GTC---GTT---AGTCTA---AAATGGATAGTCACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYLILCA---V-GYKKI-AL------------FWK-LLIASTLMLVFGYIGE---A------N--M-----------G----------------------SP------TLF-FILGMAAWLYILFEL-----F--F-GEVAAATHE--S-QKASC-A-L-A-V-V-SL-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-viral/Himb114]_KJ929834 [I-viral/Himb114] PRGD_OTU285_otuREP_9c837d1057f034f3636da82c09d44e19 gb|KJ929834| PRGD_OTU285_otuREP_9c837d1057f034f3636da82c09d44e19, putative proteorhodopsin gene, partial cds. PRGD_OTU285_otuREP_9c837d1057f034f3636da82c09d44e19, putative proteorhodopsin gene, partial cds. KJ929834 [[proteorhodopsin super-cluster I/Viral-like Himb114 Alphaproteobacterial-like cluster]] proteorhodopsin super-cluster I Viral-like Himb114 Alphaproteobacterial-like cluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Mediterranean Sea (33.762, 29.175), Indian Ocean (-33.28, 45.35) TTTATCACGGTTCCTCTCCAGATTGTGGAGTTCTACTGTATATTGCAGGCAGTAGGTTATCGAAGCGTTGCTTTATTTTTAAAGTTATTGATTGCATCTGTTGCGATGCTGGTTTTTGGTTACGTGGGTGAAACAAATATCATGAATGCAACCCTTGGTTTTGCCTTAGGAACAGTCGCCTGGCTTTATATTTTGTACCAGTTATTTGCAGGTGAGGTTAAGTTGGCTCAAACGCAGGCCAATAAGCCTTCCTGCGATTACGCGCTGGAGGGGTTGAAGTGGATCGTTACCGTT FITVPLQIVEFYCILQAVGYRSVALFLKLLIASVAMLVFGYVGETNIMNATLGFALGTVAWLYILYQLFAGEVKLAQTQANKPSCDYALEGLKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATCACGGTTCCTCTCCAGATTGTGGAGTTCTACTGTATATTGCAGGCA---------GTA---GGTTATCGAAGCGTT---GCTTTA------------------------------------TTTTTAAAG---TTATTGATTGCATCTGTTGCGATGCTGGTTTTTGGTTACGTGGGTGAA---------ACA------------------AAT------ATC---------------------------------ATG------------------------------------------------------------------AATGCA------------------ACCCTTGGT---TTTGCCTTAGGAACAGTCGCCTGGCTTTATATTTTGTACCAGTTA---------------TTT------GCA---GGTGAGGTTAAGTTGGCTCAAACGCAG------GCC---AATAAGCCTTCCTGC---GAT---TAC---GCG---CTG---GAG---GGGTTG---AAGTGGATCGTTACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIVEFYCILQA---V-GYRSV-AL------------FLK-LLIASVAMLVFGYVGE---T------N--I-----------M----------------------NA------TLG-FALGTVAWLYILYQL-----F--A-GEVKLAQTQ--A-NKPSC-D-Y-A-L-E-GL-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927493 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_e71cdb5b2635c87a283f240f96b56b53 gb|KJ927493| PRGD_OTU010_e71cdb5b2635c87a283f240f96b56b53, putative proteorhodopsin gene, partial cds. PRGD_OTU010_e71cdb5b2635c87a283f240f96b56b53, putative proteorhodopsin gene, partial cds. KJ927493 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCACTCTTACTGAGGCTTGGTGATAAAGGTAAAAAGTTCTTTGTGCAGCTTGTAACCCTTGATATAGGCATGATTGTCTGCGCCTTCATTGCAGAGACTTCACCAGTTGCTTCAACGGAATGGTGGGGCTTCTTTTTGGTTGCATGCGTCCTCGAACTTTTAATTGTTGCGACGCTCTACACTGGCCTTGGGTCCGCCATCAACTCAGCCCCAGCGCCTATTGCCAAGGCTCTTGATACGATGCGGTTGTTCATTCTTATA LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASTEWWGFFLVACVLELLIVATLYTGLGSAINSAPAPIAKALDTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCACTCTTACTGAGGCTT---------GGT------GATAAAGGTAAA---AAGTTC------------------------------------TTTGTGCAG---CTTGTAACCCTTGATATAGGCATGATTGTCTGCGCCTTCATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCT---------TCA---------------------------ACGGAATGG------------------TGGGGCTTC---TTTTTGGTTGCATGCGTCCTCGAACTTTTAATTGTTGCGACGCTC---------------TAC------ACT---GGCCTTGGGTCCGCCATCAACTCAGCC---------------CCAGCGCCTATT---GCC---AAG---GCT---CTT---GAT---ACGATG---CGGTTGTTCATTCTTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------TEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAINSA-----PAPI-A-K-A-L-D-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927476 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_973a1150da74430c5a0d592302dbc0af gb|KJ927476| PRGD_OTU010_973a1150da74430c5a0d592302dbc0af, putative proteorhodopsin gene, partial cds. PRGD_OTU010_973a1150da74430c5a0d592302dbc0af, putative proteorhodopsin gene, partial cds. KJ927476 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTCTTTACAACGCCCTTAATGCTTATCAAGTTCCCACTCTTACTGAGGCTTGGTGATAAAGGTAAAAAGTTCTTTGTGCAGCTTGTAACCCTTGATATAGGCATGATTGTCTGCGCCTTCATTGCAGAGACTTCACCAGTTGCTTCAACGGAATGGTGGGGCTTCTTTTTGGTTGCATGCGTCCTCGAACTTTTAATTGTTGCGACGCTCTACACTGGCCTTGGGTCCGCCATCAACTCAGCCCCAGCGCCTATCGCTAAAGCACTCAATACAATGAGACTGTTCATTTTGATA LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASTEWWGFFLVACVLELLIVATLYTGLGSAINSAPAPIAKALNTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACGCCCTTAATGCTTATCAAGTTCCCACTCTTACTGAGGCTT---------GGT------GATAAAGGTAAA---AAGTTC------------------------------------TTTGTGCAG---CTTGTAACCCTTGATATAGGCATGATTGTCTGCGCCTTCATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCT---------TCA---------------------------ACGGAATGG------------------TGGGGCTTC---TTTTTGGTTGCATGCGTCCTCGAACTTTTAATTGTTGCGACGCTC---------------TAC------ACT---GGCCTTGGGTCCGCCATCAACTCAGCC---------------CCAGCGCCTATC---GCT---AAA---GCA---CTC---AAT---ACAATG---AGACTGTTCATTTTGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------TEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAINSA-----PAPI-A-K-A-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927450 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_2c0eadd09987c6027fa279ec79b95dca gb|KJ927450| PRGD_OTU010_2c0eadd09987c6027fa279ec79b95dca, putative proteorhodopsin gene, partial cds. PRGD_OTU010_2c0eadd09987c6027fa279ec79b95dca, putative proteorhodopsin gene, partial cds. KJ927450 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) CTCTTTACAACGCCCTTAATGCTTATCAAGTTCCCTCTCTTACTGAGGCTTGGTGATAAAGGTAAAAAGTTCTTTGTGCAGCTTGTATCCCTTGATATAGGCATGATTGTTTGCGCCTTCATTGCAGAGACTTCACCAGTTGCTTCAACGGAATGGTGGGGCTTCTTTTTGGTTGCATGCGTCCTCGAACTTTTAATTGTTGCGACGCTCTACACTGGCCTTGGGTCCGCCATCAACTCAGCCCCAGCGCCTATCGCTAAAGCACTCAATACAATGAGACTGTTCATTTTGATA LFTTPLMLIKFPLLLRLGDKGKKFFVQLVSLDIGMIVCAFIAETSPVASTEWWGFFLVACVLELLIVATLYTGLGSAINSAPAPIAKALNTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACGCCCTTAATGCTTATCAAGTTCCCTCTCTTACTGAGGCTT---------GGT------GATAAAGGTAAA---AAGTTC------------------------------------TTTGTGCAG---CTTGTATCCCTTGATATAGGCATGATTGTTTGCGCCTTCATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCT---------TCA---------------------------ACGGAATGG------------------TGGGGCTTC---TTTTTGGTTGCATGCGTCCTCGAACTTTTAATTGTTGCGACGCTC---------------TAC------ACT---GGCCTTGGGTCCGCCATCAACTCAGCC---------------CCAGCGCCTATC---GCT---AAA---GCA---CTC---AAT---ACAATG---AGACTGTTCATTTTGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVSLDIGMIVCAFIAE---T------S-------------------P-VA---S---------TEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAINSA-----PAPI-A-K-A-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927471 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_8be8e0aa85db73624749ce567385a6a9 gb|KJ927471| PRGD_OTU010_8be8e0aa85db73624749ce567385a6a9, putative proteorhodopsin gene, partial cds. PRGD_OTU010_8be8e0aa85db73624749ce567385a6a9, putative proteorhodopsin gene, partial cds. KJ927471 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTCTTTACAACGCCCTTAATGCTTATCAAGTTTCCACTCTTACTGAGGCTTGGTGATAAAGGTAAAAAGTTCTTTGTGCAGCTTGTAACCCTTGATATAGGCATGATTGTGTGCGCCTTCATTGCAGAGACTTCACCAGTTGCTTCAACGGAATGGTGGGGCTTCTTTTTGGTTGCATGCGTCCTCGAACTTTTAATTGTTGCGACTCTCTACACTGGCCTTGGGTCAGCCATCAACTCGGCCCCAGCGCCTATCGCTAAAGCACTCAATACAATGAGGCTGTTCATTTTGATA LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASTEWWGFFLVACVLELLIVATLYTGLGSAINSAPAPIAKALNTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACGCCCTTAATGCTTATCAAGTTTCCACTCTTACTGAGGCTT---------GGT------GATAAAGGTAAA---AAGTTC------------------------------------TTTGTGCAG---CTTGTAACCCTTGATATAGGCATGATTGTGTGCGCCTTCATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCT---------TCA---------------------------ACGGAATGG------------------TGGGGCTTC---TTTTTGGTTGCATGCGTCCTCGAACTTTTAATTGTTGCGACTCTC---------------TAC------ACT---GGCCTTGGGTCAGCCATCAACTCGGCC---------------CCAGCGCCTATC---GCT---AAA---GCA---CTC---AAT---ACAATG---AGGCTGTTCATTTTGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------TEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAINSA-----PAPI-A-K-A-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927442 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_085d114e7cd4222ba279fe7cb2f78b90 gb|KJ927442| PRGD_OTU010_085d114e7cd4222ba279fe7cb2f78b90, putative proteorhodopsin gene, partial cds. PRGD_OTU010_085d114e7cd4222ba279fe7cb2f78b90, putative proteorhodopsin gene, partial cds. KJ927442 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -33.28, 45.35) CTCTTTACAACGCCCTTAATGCTTATCAAGTTCCCACTCTTACTGAGGCTTGGTGATAAAGGTAAAAAGTTCTTTGTACAGCTTGTAACACTTGATATAGGCATGATTGTCTGCGCTTTCATTGCAGAGACTTCACCAGTTGCTTCAACGGAATGGTGGGGCTTCTTTTTGGTTGCATGCGTCCTCGAACTTTTAATTGTTGCGACTCTCTACACTGGCCTTGGGTCTGCCATCAACTCAGCCCCAGCGCCTATCGCTAAAGCACTCAATACAATGAGACTGTTCATTTTGATA LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASTEWWGFFLVACVLELLIVATLYTGLGSAINSAPAPIAKALNTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACGCCCTTAATGCTTATCAAGTTCCCACTCTTACTGAGGCTT---------GGT------GATAAAGGTAAA---AAGTTC------------------------------------TTTGTACAG---CTTGTAACACTTGATATAGGCATGATTGTCTGCGCTTTCATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCT---------TCA---------------------------ACGGAATGG------------------TGGGGCTTC---TTTTTGGTTGCATGCGTCCTCGAACTTTTAATTGTTGCGACTCTC---------------TAC------ACT---GGCCTTGGGTCTGCCATCAACTCAGCC---------------CCAGCGCCTATC---GCT---AAA---GCA---CTC---AAT---ACAATG---AGACTGTTCATTTTGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------TEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAINSA-----PAPI-A-K-A-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927488 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_d69722cbc3f4f517cce766ba501fc34b gb|KJ927488| PRGD_OTU010_d69722cbc3f4f517cce766ba501fc34b, putative proteorhodopsin gene, partial cds. PRGD_OTU010_d69722cbc3f4f517cce766ba501fc34b, putative proteorhodopsin gene, partial cds. KJ927488 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -33.9602, -73.3769), Indian Ocean (-33.28, 45.35) CTCTTTACAACGCCCCTAATGCTTATCAAGTTCCCGCTTCTACTGAGGCTTGGTGATAAGGGCAAAAAGTTTTTTGTTCAGCTTGTAACTCTTGATATTGGCATGATCGTTTGTGCCTTCATTGCAGAGACTTCACCAGTTGCTTCAACGGAATGGTGGGGCTTCTTTTTAGTTGCATGCGTCCTCGAACTCTTAATTGTTGCGACACTCTACACTGGCCTTGGGTCTGCCATTAGCTCAGCCCCAGCGCCGATCGCTAAAGCGCTCAATACGATGAGACTGTTCATTTTGATA LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASTEWWGFFLVACVLELLIVATLYTGLGSAISSAPAPIAKALNTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACGCCCCTAATGCTTATCAAGTTCCCGCTTCTACTGAGGCTT---------GGT------GATAAGGGCAAA---AAGTTT------------------------------------TTTGTTCAG---CTTGTAACTCTTGATATTGGCATGATCGTTTGTGCCTTCATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCT---------TCA---------------------------ACGGAATGG------------------TGGGGCTTC---TTTTTAGTTGCATGCGTCCTCGAACTCTTAATTGTTGCGACACTC---------------TAC------ACT---GGCCTTGGGTCTGCCATTAGCTCAGCC---------------CCAGCGCCGATC---GCT---AAA---GCG---CTC---AAT---ACGATG---AGACTGTTCATTTTGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------TEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAISSA-----PAPI-A-K-A-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927504 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_fee4eb78a6da6098a2ff1ec5cf3d803c gb|KJ927504| PRGD_OTU010_fee4eb78a6da6098a2ff1ec5cf3d803c, putative proteorhodopsin gene, partial cds. PRGD_OTU010_fee4eb78a6da6098a2ff1ec5cf3d803c, putative proteorhodopsin gene, partial cds. KJ927504 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Indian Ocean (-33.28, 45.35) CTCTTTACAACGCCCCTAATGCTTATCAAGTTCCCACTTTTACTGAGGCTTGGTGATAAGGGCAAAAAGTTTTTTGTTCAGCTTGTGACTCTTGATATTGGCATGATCGTTTGTGCCTTCATTGCAGAAACTTCACCAGTTGCTTCAACGGAATGGTGGGGCTTCTTTTTAGTTGCATGCGTCCTCGAACTCTTAATTGTTGCGACACTCTACACTGGCCTTGGGTCTGCCATTAGCTCAGCCCCAGCACCGATCGCTAAAGCGCTCAATACAATGAGACTGTTCATTTTGATA LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASTEWWGFFLVACVLELLIVATLYTGLGSAISSAPAPIAKALNTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACGCCCCTAATGCTTATCAAGTTCCCACTTTTACTGAGGCTT---------GGT------GATAAGGGCAAA---AAGTTT------------------------------------TTTGTTCAG---CTTGTGACTCTTGATATTGGCATGATCGTTTGTGCCTTCATTGCAGAA---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCT---------TCA---------------------------ACGGAATGG------------------TGGGGCTTC---TTTTTAGTTGCATGCGTCCTCGAACTCTTAATTGTTGCGACACTC---------------TAC------ACT---GGCCTTGGGTCTGCCATTAGCTCAGCC---------------CCAGCACCGATC---GCT---AAA---GCG---CTC---AAT---ACAATG---AGACTGTTCATTTTGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------TEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAISSA-----PAPI-A-K-A-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927449 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_2b7be37939889bd292840297c70bb467 gb|KJ927449| PRGD_OTU010_2b7be37939889bd292840297c70bb467, putative proteorhodopsin gene, partial cds. PRGD_OTU010_2b7be37939889bd292840297c70bb467, putative proteorhodopsin gene, partial cds. KJ927449 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) CTCTTTACAACGCCATTGATGCTTATCAAGTTCCCACTTTTACTGAGGCTTGGTGACAAGGGAAAAAAGTTTTTTGTACAGCTTGTAACTCTTGACATTGGCATGATTGTTTGTGCCTTCATTGCAGAGACTTCACCAGTCGCTTCAAATGAATGGTGGGGATTCTTTTTGGTTGCGTGCGTCCTAGAGCTTTTAATTGTTGCGACTCTCTACACTGGCCTTGGGTCTGCTATTAGCTCAGCCCCTGCTCCTATCGCTAAAGCACTGAATACAATGCGACTATTCATTTTGATA LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAISSAPAPIAKALNTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACGCCATTGATGCTTATCAAGTTCCCACTTTTACTGAGGCTT---------GGT------GACAAGGGAAAA---AAGTTT------------------------------------TTTGTACAG---CTTGTAACTCTTGACATTGGCATGATTGTTTGTGCCTTCATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTCGCT---------TCA---------------------------AATGAATGG------------------TGGGGATTC---TTTTTGGTTGCGTGCGTCCTAGAGCTTTTAATTGTTGCGACTCTC---------------TAC------ACT---GGCCTTGGGTCTGCTATTAGCTCAGCC---------------CCTGCTCCTATC---GCT---AAA---GCA---CTG---AAT---ACAATG---CGACTATTCATTTTGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAISSA-----PAPI-A-K-A-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927496 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_f42d6a73f820f3767a7d6b41172705a7 gb|KJ927496| PRGD_OTU010_f42d6a73f820f3767a7d6b41172705a7, putative proteorhodopsin gene, partial cds. PRGD_OTU010_f42d6a73f820f3767a7d6b41172705a7, putative proteorhodopsin gene, partial cds. KJ927496 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) CTCTTTACAACGCCATTGATGCTTATCAAGTTCCCACTTTTACTGAGGCTTGGTGACAAGGGAAAAAAGTTTTTTGTACAGCTTGTAACTCTTGACATTGGCATGATTGTTTGTGCCTTCATTGCAGAGACTTCACCAGTCGCTTCAAATGAGTGGTGGGGATTCTTTTTGGTTGCGTGCGTCCTAGAGCTTTTAATTGTTGCGACTCTCTACACTGGCCTTGGGTCTGCTATTAGCTCAGCCCCTGCTCCTATCGCTAAAGCACTGAATACAATGCGACTATTCATTTTAATA LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAISSAPAPIAKALNTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACGCCATTGATGCTTATCAAGTTCCCACTTTTACTGAGGCTT---------GGT------GACAAGGGAAAA---AAGTTT------------------------------------TTTGTACAG---CTTGTAACTCTTGACATTGGCATGATTGTTTGTGCCTTCATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTCGCT---------TCA---------------------------AATGAGTGG------------------TGGGGATTC---TTTTTGGTTGCGTGCGTCCTAGAGCTTTTAATTGTTGCGACTCTC---------------TAC------ACT---GGCCTTGGGTCTGCTATTAGCTCAGCC---------------CCTGCTCCTATC---GCT---AAA---GCA---CTG---AAT---ACAATG---CGACTATTCATTTTAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAISSA-----PAPI-A-K-A-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927461 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_64ec35fbea4f099d74a40b28e0df49e5 gb|KJ927461| PRGD_OTU010_64ec35fbea4f099d74a40b28e0df49e5, putative proteorhodopsin gene, partial cds. PRGD_OTU010_64ec35fbea4f099d74a40b28e0df49e5, putative proteorhodopsin gene, partial cds. KJ927461 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) CTCTTTACAACGCCATTAATGCTTATCAAGTTCCCGCTTTTACTGAGGCTTGGTGACAAGGGCAAAAAGTTTTTTGTACAGCTTGTAACTCTTGACATTGGCATGATTGTTTGTGCCTTCATTGCAGAGACTTCACCAGTCGCTTCAAATGAATGGTGGGGATTCTTTTTAGTTGCGTGCGTCCTAGAACTTTTAATTGTTGCGACTCTCTACACTGGCCTTGGGTCTGCTATTAGCTCAGCACCTGCTCCTATCGCTAAAGCACTGAATACAATGCGACTATTCATTTTGATA LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAISSAPAPIAKALNTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACGCCATTAATGCTTATCAAGTTCCCGCTTTTACTGAGGCTT---------GGT------GACAAGGGCAAA---AAGTTT------------------------------------TTTGTACAG---CTTGTAACTCTTGACATTGGCATGATTGTTTGTGCCTTCATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTCGCT---------TCA---------------------------AATGAATGG------------------TGGGGATTC---TTTTTAGTTGCGTGCGTCCTAGAACTTTTAATTGTTGCGACTCTC---------------TAC------ACT---GGCCTTGGGTCTGCTATTAGCTCAGCA---------------CCTGCTCCTATC---GCT---AAA---GCA---CTG---AAT---ACAATG---CGACTATTCATTTTGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAISSA-----PAPI-A-K-A-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927481 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_bf328627ece31edbe04f2595c29b6f43 gb|KJ927481| PRGD_OTU010_bf328627ece31edbe04f2595c29b6f43, putative proteorhodopsin gene, partial cds. PRGD_OTU010_bf328627ece31edbe04f2595c29b6f43, putative proteorhodopsin gene, partial cds. KJ927481 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) CTCTTTACAACGCCATTGATGCTTATCAAGTTCCCACTTTTACTGAGGCTTGGTGACAAGGGCAAAAAGTTTTTTGTACAGCTTGTAACTCTTGACATTGGCATGATTGTTTGTGCCTTTATTGCAGAGACTTCACCAGTCGCTTCAAATGAATGGTGGGGATTCTTTTTAGTTGCGTGCGTCCTAGAGCTTTTAATTGTTGCGACTCTCTACACTGGCCTTGGGTCTGCTATTAGCTCAGCTCCTGCCCCTATCGCTAAAGCACTGAATACAATGCGACTATTCATTTTGATT LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAISSAPAPIAKALNTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACGCCATTGATGCTTATCAAGTTCCCACTTTTACTGAGGCTT---------GGT------GACAAGGGCAAA---AAGTTT------------------------------------TTTGTACAG---CTTGTAACTCTTGACATTGGCATGATTGTTTGTGCCTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTCGCT---------TCA---------------------------AATGAATGG------------------TGGGGATTC---TTTTTAGTTGCGTGCGTCCTAGAGCTTTTAATTGTTGCGACTCTC---------------TAC------ACT---GGCCTTGGGTCTGCTATTAGCTCAGCT---------------CCTGCCCCTATC---GCT---AAA---GCA---CTG---AAT---ACAATG---CGACTATTCATTTTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAISSA-----PAPI-A-K-A-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927465 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_7417678d66f98b301e4770bbe5927711 gb|KJ927465| PRGD_OTU010_7417678d66f98b301e4770bbe5927711, putative proteorhodopsin gene, partial cds. PRGD_OTU010_7417678d66f98b301e4770bbe5927711, putative proteorhodopsin gene, partial cds. KJ927465 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCTTTACAACGCCATTGATGCTTATCAAATTCCCACTTTTACTAAGGCTTGGTGACAAGGGCAAAAAGTTTTTTGTACAGCTTGTAACTCTTGACATTGGCATGATTGTTTGTGCCTTCATTGCAGAGACTTCACCAGTCGCTTCAAATGAATGGTGGGGATTCTTTTTGGTTGCGTGCGTCCTAGAGCTTTTAATTGTTGCGACTCTCTACACTGGCCTTGGGTCCGCTATTAGCTCAGCTCCTGCTCCTATCGCTAAAGCCCTGAATACGATGCGACTATTCATTTTGATA LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAISSAPAPIAKALNTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACGCCATTGATGCTTATCAAATTCCCACTTTTACTAAGGCTT---------GGT------GACAAGGGCAAA---AAGTTT------------------------------------TTTGTACAG---CTTGTAACTCTTGACATTGGCATGATTGTTTGTGCCTTCATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTCGCT---------TCA---------------------------AATGAATGG------------------TGGGGATTC---TTTTTGGTTGCGTGCGTCCTAGAGCTTTTAATTGTTGCGACTCTC---------------TAC------ACT---GGCCTTGGGTCCGCTATTAGCTCAGCT---------------CCTGCTCCTATC---GCT---AAA---GCC---CTG---AAT---ACGATG---CGACTATTCATTTTGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAISSA-----PAPI-A-K-A-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927460 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_6358f043ed905dfc4a56e229aca3a38f gb|KJ927460| PRGD_OTU010_6358f043ed905dfc4a56e229aca3a38f, putative proteorhodopsin gene, partial cds. PRGD_OTU010_6358f043ed905dfc4a56e229aca3a38f, putative proteorhodopsin gene, partial cds. KJ927460 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) CTCTTTACAACGCCATTGATGCTTATCAAGTTTCCACTTTTACTGAGGCTTGGTGACAAGGGCAAAAAGTTTTTTGTACAGCTTGTAACTCTTGACATTGGCATGATTGTTTGTGCCTTCATTGCAGAGACTTCACCAGTCGCTTCAAGTGAATGGTGGGGATTCTTTTTGGTTGCGTGCGTCCTAGAGCTTTTAATTGTTGCGACTCTCTACACTGGCCTCGGATCTGCTATCAGCTCCGCTCCTGCTCCTATCGCTAAAGCACTGAATACAATGAGACTATTCATTTTGATA LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASSEWWGFFLVACVLELLIVATLYTGLGSAISSAPAPIAKALNTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACGCCATTGATGCTTATCAAGTTTCCACTTTTACTGAGGCTT---------GGT------GACAAGGGCAAA---AAGTTT------------------------------------TTTGTACAG---CTTGTAACTCTTGACATTGGCATGATTGTTTGTGCCTTCATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTCGCT---------TCA---------------------------AGTGAATGG------------------TGGGGATTC---TTTTTGGTTGCGTGCGTCCTAGAGCTTTTAATTGTTGCGACTCTC---------------TAC------ACT---GGCCTCGGATCTGCTATCAGCTCCGCT---------------CCTGCTCCTATC---GCT---AAA---GCA---CTG---AAT---ACAATG---AGACTATTCATTTTGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------SEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAISSA-----PAPI-A-K-A-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927472 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_8e4ae3c6b35c51ad5da1ffdca82e6c24 gb|KJ927472| PRGD_OTU010_8e4ae3c6b35c51ad5da1ffdca82e6c24, putative proteorhodopsin gene, partial cds. PRGD_OTU010_8e4ae3c6b35c51ad5da1ffdca82e6c24, putative proteorhodopsin gene, partial cds. KJ927472 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-35.05, 23.73) CTCTTTACAACGCCATTGATGCTTATCAAGTTTCCACTTTTACTGAGGCTTGGTGACAAGGGCAAAAAGTTTTTTGTACAGCTTGTGACTCTTGACATTGGCATGATTGTTTGTGCCTTCATTGCAGAGACTTCACCAGTCGCTTCAAGTACATGGTGGGGATTCTTTTTGGTTGCGTGCGTCCTAGAGCTTTTAATTGTTGCCACTCTCTACACTGGCCTCGGATCTGCTATCAGCTCCGCTCCTGCTCCTATCGCTAAAGCACTGAATACAATGAGACTATTCATTTTGATA LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASSTWWGFFLVACVLELLIVATLYTGLGSAISSAPAPIAKALNTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACGCCATTGATGCTTATCAAGTTTCCACTTTTACTGAGGCTT---------GGT------GACAAGGGCAAA---AAGTTT------------------------------------TTTGTACAG---CTTGTGACTCTTGACATTGGCATGATTGTTTGTGCCTTCATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTCGCT---------TCA---------------------------AGTACATGG------------------TGGGGATTC---TTTTTGGTTGCGTGCGTCCTAGAGCTTTTAATTGTTGCCACTCTC---------------TAC------ACT---GGCCTCGGATCTGCTATCAGCTCCGCT---------------CCTGCTCCTATC---GCT---AAA---GCA---CTG---AAT---ACAATG---AGACTATTCATTTTGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------STW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAISSA-----PAPI-A-K-A-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927479 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_b308170a9765ed5e3c632ae7c27842c0 gb|KJ927479| PRGD_OTU010_b308170a9765ed5e3c632ae7c27842c0, putative proteorhodopsin gene, partial cds. PRGD_OTU010_b308170a9765ed5e3c632ae7c27842c0, putative proteorhodopsin gene, partial cds. KJ927479 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCTTTACAACGCCGTTGATGCTTATCAAGTTCCCACTCCTACTGAGGCTTGGTGACAAGGGAAAAAAGTTTTTTGTACAGCTTGTAACTCTTGATATTGGCATGATCGTTTGTGCCTTCATTGCAGAGACTTCACCAGTTGCCTCAAACGAATGGTGGGGATTCTTTTTGGTTGCGTGCGTCCTCGAACTCTTAATCGTTGCGACTCTCTATACTGGCCTTGGGTCTGCCATTAGCTCAGCCCCAGCGCCAATTGCTAAAGCACTCAATACGATGAGGTTATTTATTTTGATC LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAISSAPAPIAKALNTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACGCCGTTGATGCTTATCAAGTTCCCACTCCTACTGAGGCTT---------GGT------GACAAGGGAAAA---AAGTTT------------------------------------TTTGTACAG---CTTGTAACTCTTGATATTGGCATGATCGTTTGTGCCTTCATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------AACGAATGG------------------TGGGGATTC---TTTTTGGTTGCGTGCGTCCTCGAACTCTTAATCGTTGCGACTCTC---------------TAT------ACT---GGCCTTGGGTCTGCCATTAGCTCAGCC---------------CCAGCGCCAATT---GCT---AAA---GCA---CTC---AAT---ACGATG---AGGTTATTTATTTTGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAISSA-----PAPI-A-K-A-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927487 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_d42308a1f74e3626b4cf4fd1be01871f gb|KJ927487| PRGD_OTU010_d42308a1f74e3626b4cf4fd1be01871f, putative proteorhodopsin gene, partial cds. PRGD_OTU010_d42308a1f74e3626b4cf4fd1be01871f, putative proteorhodopsin gene, partial cds. KJ927487 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -33.9602, -73.3769), English Channel (48.7717, -3.9683) CTCTTTACAACGCCGTTGATGCTTATCAAGTTCCCACTTCTACTGAGGCTTGGTGACAAGGGAAAAAAGTTTTTTGTACAGCTTGTAACTCTTGATATTGGCATGATCGTTTGTGCCTTCATTGCAGAGACTTCACCAGTTGCCTCAAATGAATGGTGGGGATTCTTTTTGGTTGCGTGCGTCCTCGAACTCTTAATCGTTGCGACTCTCTATACTGGCCTTGGGTCTGCCATTAGCTCAGCCCCAGCGCCAATTGCTAAAGCACTCAATACGATGAGGTTATTTATTTTGATC LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAISSAPAPIAKALNTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACGCCGTTGATGCTTATCAAGTTCCCACTTCTACTGAGGCTT---------GGT------GACAAGGGAAAA---AAGTTT------------------------------------TTTGTACAG---CTTGTAACTCTTGATATTGGCATGATCGTTTGTGCCTTCATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------AATGAATGG------------------TGGGGATTC---TTTTTGGTTGCGTGCGTCCTCGAACTCTTAATCGTTGCGACTCTC---------------TAT------ACT---GGCCTTGGGTCTGCCATTAGCTCAGCC---------------CCAGCGCCAATT---GCT---AAA---GCA---CTC---AAT---ACGATG---AGGTTATTTATTTTGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAISSA-----PAPI-A-K-A-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927492 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_e16a0199bfbd4796f4d84f528e3469f7 gb|KJ927492| PRGD_OTU010_e16a0199bfbd4796f4d84f528e3469f7, putative proteorhodopsin gene, partial cds. PRGD_OTU010_e16a0199bfbd4796f4d84f528e3469f7, putative proteorhodopsin gene, partial cds. KJ927492 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCTTTACAACGCCGTTGATGCTTATCAAGTTCCCACTTCTACTGAGGCTTGGTGACAAGGGAAAAAAGTTTTTTGTACAGCTTGTAACTCTTGATATTGGCATGATCGTTTGTGCCTTCATTGCAGAGACTTCACCAGTTGCCTCAAATGAATGGTGGGGATTCTTTTTGGTTGCGTGCGTCCTCGAACTCTTAATCGTTGCGACTCTCTATACTGGCCTTGGGTCTGCCATTAGCTCAGCCCCAGCGCCAATTGCTAAAGCACTCAATACGATGAGGTTGTTCATTCTTATA LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAISSAPAPIAKALNTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACGCCGTTGATGCTTATCAAGTTCCCACTTCTACTGAGGCTT---------GGT------GACAAGGGAAAA---AAGTTT------------------------------------TTTGTACAG---CTTGTAACTCTTGATATTGGCATGATCGTTTGTGCCTTCATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------AATGAATGG------------------TGGGGATTC---TTTTTGGTTGCGTGCGTCCTCGAACTCTTAATCGTTGCGACTCTC---------------TAT------ACT---GGCCTTGGGTCTGCCATTAGCTCAGCC---------------CCAGCGCCAATT---GCT---AAA---GCA---CTC---AAT---ACGATG---AGGTTGTTCATTCTTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAISSA-----PAPI-A-K-A-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927463 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_680cf7845f2c7974a5a0e0e9fdd38403 gb|KJ927463| PRGD_OTU010_680cf7845f2c7974a5a0e0e9fdd38403, putative proteorhodopsin gene, partial cds. PRGD_OTU010_680cf7845f2c7974a5a0e0e9fdd38403, putative proteorhodopsin gene, partial cds. KJ927463 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) CTCTTTACAACGCCGTTGATGCTTATTAAGTTCCCACTTCTACTGAGGCTTGGTGACAAGGGAAAAAAGTTTTTTGTACAGCTTGTAACTCTTGATATTGGCATGATCGTTTGTGCCTTCATCGCAGAGACTTCACCAGTTGCCTCAAATGAATGGTGGGGATTCTTTTTGGTTGCGTGCGTCCTCGAACTCTTAATCGTTGCGACTCTCTATACTGGCCTTGGGTCTGCCATTAGCTCAGCCCCAGCACCACTTGCTAAGGCACTCAATACGATGAGGCTATTCATTTTGATA LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAISSAPAPLAKALNTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACGCCGTTGATGCTTATTAAGTTCCCACTTCTACTGAGGCTT---------GGT------GACAAGGGAAAA---AAGTTT------------------------------------TTTGTACAG---CTTGTAACTCTTGATATTGGCATGATCGTTTGTGCCTTCATCGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------AATGAATGG------------------TGGGGATTC---TTTTTGGTTGCGTGCGTCCTCGAACTCTTAATCGTTGCGACTCTC---------------TAT------ACT---GGCCTTGGGTCTGCCATTAGCTCAGCC---------------CCAGCACCACTT---GCT---AAG---GCA---CTC---AAT---ACGATG---AGGCTATTCATTTTGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAISSA-----PAPL-A-K-A-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927468 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_82657d223b95331fac2c10c71a8eeb51 gb|KJ927468| PRGD_OTU010_82657d223b95331fac2c10c71a8eeb51, putative proteorhodopsin gene, partial cds. PRGD_OTU010_82657d223b95331fac2c10c71a8eeb51, putative proteorhodopsin gene, partial cds. KJ927468 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683) CTCTTTACAACGCCGTTGATGCTTATCAAGTTCCCACTTCTACTGAGGCTTGGTGACAAGGGAAAAAAGTTTTTTGTACAGCTTGTAACTCTTGACATTGGCATGATCGTTTGTGCCTTCATTGCAGAGACTTCACCAGTTGCCTCAAATGAATGGTGGGGATTCTTTTTGGTTGCGTGCGTCCTCGAACTCTTAATCGTTGCGACTCTATATACTGGCCTTGGGTCTGCCATTAGCTCAGCCCCAGCGCCAATTGCTAAAGCACTCAATACGATGAGGCTATTCATTTTGATA LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAISSAPAPIAKALNTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACGCCGTTGATGCTTATCAAGTTCCCACTTCTACTGAGGCTT---------GGT------GACAAGGGAAAA---AAGTTT------------------------------------TTTGTACAG---CTTGTAACTCTTGACATTGGCATGATCGTTTGTGCCTTCATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------AATGAATGG------------------TGGGGATTC---TTTTTGGTTGCGTGCGTCCTCGAACTCTTAATCGTTGCGACTCTA---------------TAT------ACT---GGCCTTGGGTCTGCCATTAGCTCAGCC---------------CCAGCGCCAATT---GCT---AAA---GCA---CTC---AAT---ACGATG---AGGCTATTCATTTTGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAISSA-----PAPI-A-K-A-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927500 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_fb32eaf1172e0e79324291668f6edf04 gb|KJ927500| PRGD_OTU010_fb32eaf1172e0e79324291668f6edf04, putative proteorhodopsin gene, partial cds. PRGD_OTU010_fb32eaf1172e0e79324291668f6edf04, putative proteorhodopsin gene, partial cds. KJ927500 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) CTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTTGGTGACAAAGGTAAAAAGTTTTTTGTACAGCTTGTAACGCTTGACATAGGCATGATTGTATGTGCGTTTATTGCAGAGACTTCACCAGTTGCTTCAAACGAGTGGTGGGGGTTCTTTCTAGTTGCGTGCGTCCTCGAGCTCTTAATTGTTGCGACTCTCTACACTGGCCTTGGGTCCGCTATTAGCTCAGCCCCAGCGCCTATTGCTAAAGCACTCAATACGATGAGACTTTTCATTTTGATA LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAISSAPAPIAKALNTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTT---------GGT------GACAAAGGTAAA---AAGTTT------------------------------------TTTGTACAG---CTTGTAACGCTTGACATAGGCATGATTGTATGTGCGTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCT---------TCA---------------------------AACGAGTGG------------------TGGGGGTTC---TTTCTAGTTGCGTGCGTCCTCGAGCTCTTAATTGTTGCGACTCTC---------------TAC------ACT---GGCCTTGGGTCCGCTATTAGCTCAGCC---------------CCAGCGCCTATT---GCT---AAA---GCA---CTC---AAT---ACGATG---AGACTTTTCATTTTGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAISSA-----PAPI-A-K-A-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927498 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_f95f905f2f360893daca8039a49c198f gb|KJ927498| PRGD_OTU010_f95f905f2f360893daca8039a49c198f, putative proteorhodopsin gene, partial cds. PRGD_OTU010_f95f905f2f360893daca8039a49c198f, putative proteorhodopsin gene, partial cds. KJ927498 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCTTTACAACGCCCTTGATGCTAATCAAGTTCCCTCTCTTGCTGCGGCTTGGTGACAAAGGCAAAAAGTTTTTTGTACAGCTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAGACTTCACCAGTTGCCTCAAACGAGTGGTGGGGATTTTTTCTGGTCGCGTGCGTACTCGAACTCTTAATTGTTGCGACTCTCTACACTGGCCTTGGGTCTGCCATTAGCTCAGCCCCAGCGCCTATTGCTAAAGCACTCAATACAATGAGACTATTCATTTTGATA LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAISSAPAPIAKALNTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACGCCCTTGATGCTAATCAAGTTCCCTCTCTTGCTGCGGCTT---------GGT------GACAAAGGCAAA---AAGTTT------------------------------------TTTGTACAG---CTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------AACGAGTGG------------------TGGGGATTT---TTTCTGGTCGCGTGCGTACTCGAACTCTTAATTGTTGCGACTCTC---------------TAC------ACT---GGCCTTGGGTCTGCCATTAGCTCAGCC---------------CCAGCGCCTATT---GCT---AAA---GCA---CTC---AAT---ACAATG---AGACTATTCATTTTGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAISSA-----PAPI-A-K-A-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927469 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_859d0447dd4f5f2753f5bc19102df55b gb|KJ927469| PRGD_OTU010_859d0447dd4f5f2753f5bc19102df55b, putative proteorhodopsin gene, partial cds. PRGD_OTU010_859d0447dd4f5f2753f5bc19102df55b, putative proteorhodopsin gene, partial cds. KJ927469 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTCTTTACAACGCCCTTGATGCTTATAAAGTTCCCACTCTTGCTGCGGCTTGGTGACAAGGGTAAAAAGTTTTTCGTACAGCTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAGACTTCACCAGTTGCCTCAAACGAATGGTGGGGATTTTTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTTGCGACTCTCTACACTGGCCTTGGGTCTGCCATTAGCTCGGCCCCAGCGCCTATTGCAAAAGCACTCAATACTATGAGACTTTTCATTTTGATA LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAISSAPAPIAKALNTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACGCCCTTGATGCTTATAAAGTTCCCACTCTTGCTGCGGCTT---------GGT------GACAAGGGTAAA---AAGTTT------------------------------------TTCGTACAG---CTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------AACGAATGG------------------TGGGGATTT---TTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTTGCGACTCTC---------------TAC------ACT---GGCCTTGGGTCTGCCATTAGCTCGGCC---------------CCAGCGCCTATT---GCA---AAA---GCA---CTC---AAT---ACTATG---AGACTTTTCATTTTGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAISSA-----PAPI-A-K-A-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927451 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_32212a515b787256fbcf3ccb229ecf5a gb|KJ927451| PRGD_OTU010_32212a515b787256fbcf3ccb229ecf5a, putative proteorhodopsin gene, partial cds. PRGD_OTU010_32212a515b787256fbcf3ccb229ecf5a, putative proteorhodopsin gene, partial cds. KJ927451 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTCTTTACAACGCCCTTGATGCTTATAAAGTTCCCACTCTTGCTGCGGCTTGGTGACAAGGGTAAAAAGTTTTTCGTACAGCTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAGACTTCACCAGTTGCCTCAAACGAATGGTGGGGATTTTTCTTGGTCGCGTGCGTCCTCGAACTTTTAATTGTTGCGACTCTCTACACTGGCCTTGGGTCTGCCATTAGCTCAGCCCCAGCGCCTATTGCTAAAGCACTCAATACGATGAGACTTTTCATTTTGATA LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAISSAPAPIAKALNTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACGCCCTTGATGCTTATAAAGTTCCCACTCTTGCTGCGGCTT---------GGT------GACAAGGGTAAA---AAGTTT------------------------------------TTCGTACAG---CTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------AACGAATGG------------------TGGGGATTT---TTCTTGGTCGCGTGCGTCCTCGAACTTTTAATTGTTGCGACTCTC---------------TAC------ACT---GGCCTTGGGTCTGCCATTAGCTCAGCC---------------CCAGCGCCTATT---GCT---AAA---GCA---CTC---AAT---ACGATG---AGACTTTTCATTTTGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAISSA-----PAPI-A-K-A-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927452 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_3b48c952557703b782e3d35260ec58e2 gb|KJ927452| PRGD_OTU010_3b48c952557703b782e3d35260ec58e2, putative proteorhodopsin gene, partial cds. PRGD_OTU010_3b48c952557703b782e3d35260ec58e2, putative proteorhodopsin gene, partial cds. KJ927452 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -33.9602, -73.3769), English Channel (48.7717, -3.9683) CTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTTGGTGACAAAGGTAAAAAGTTTTTCGTACAGCTTGTAACGCTTGACATAGGCATGATTGTCTGCGCCTTCATTGCAGAGACTTCACCAGTTGCTTCAACGGAATGGTGGGGCTTCTTTTTGGTTGCATGCGTCCTCGAACTTTTAATTGTTGCGACGCTCTACACTGGCCTTGGGTCCGCCATCAACTCAGCCCCAGCGCCTATCGCTAAAGCACTCAATACAATGAGACTGTTCATTTTGATA LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASTEWWGFFLVACVLELLIVATLYTGLGSAINSAPAPIAKALNTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTT---------GGT------GACAAAGGTAAA---AAGTTT------------------------------------TTCGTACAG---CTTGTAACGCTTGACATAGGCATGATTGTCTGCGCCTTCATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCT---------TCA---------------------------ACGGAATGG------------------TGGGGCTTC---TTTTTGGTTGCATGCGTCCTCGAACTTTTAATTGTTGCGACGCTC---------------TAC------ACT---GGCCTTGGGTCCGCCATCAACTCAGCC---------------CCAGCGCCTATC---GCT---AAA---GCA---CTC---AAT---ACAATG---AGACTGTTCATTTTGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------TEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAINSA-----PAPI-A-K-A-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927502 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_fd6399a2f65a305a18464078247b32e2 gb|KJ927502| PRGD_OTU010_fd6399a2f65a305a18464078247b32e2, putative proteorhodopsin gene, partial cds. PRGD_OTU010_fd6399a2f65a305a18464078247b32e2, putative proteorhodopsin gene, partial cds. KJ927502 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683) CTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTTGGTGACAAAGGTAAAAAGTTTTTCGTACAGCTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAGACTTCACCAGTTGCTTCAACGGAATGGTGGGGCTTCTTTTTGGTTGCATGCGTCCTCGAACTTTTAATTGTTGCGACGCTCTACACTGGCCTTGGGTCCGCCATCAACTCAGCCCCAGCGCCTATCGCTAAAGCACTCAATACAATGAGACTGTTCATTTTGATA LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASTEWWGFFLVACVLELLIVATLYTGLGSAINSAPAPIAKALNTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTT---------GGT------GACAAAGGTAAA---AAGTTT------------------------------------TTCGTACAG---CTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCT---------TCA---------------------------ACGGAATGG------------------TGGGGCTTC---TTTTTGGTTGCATGCGTCCTCGAACTTTTAATTGTTGCGACGCTC---------------TAC------ACT---GGCCTTGGGTCCGCCATCAACTCAGCC---------------CCAGCGCCTATC---GCT---AAA---GCA---CTC---AAT---ACAATG---AGACTGTTCATTTTGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------TEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAINSA-----PAPI-A-K-A-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927462 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_66ff2f60417566cea6386691e52c90f8 gb|KJ927462| PRGD_OTU010_66ff2f60417566cea6386691e52c90f8, putative proteorhodopsin gene, partial cds. PRGD_OTU010_66ff2f60417566cea6386691e52c90f8, putative proteorhodopsin gene, partial cds. KJ927462 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 01-juil-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTTGGTGACAAAGGTAAAAAGTTTTTCGTACAGCTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAGACTTCACCAGTTGCCTCAAACGAGTGGTGGGGCTTCTTTTTGGTTGCATGCGTCCTCGAACTTTTAATTGTTGCGACGCTCTACACTGGCCTTGGGTCCGCCATCAACTCAGCCCCAGCGCCTATCGCTAAAGCACTCAATACAATGAGACTGTTCATTTTGATA LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAINSAPAPIAKALNTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTT---------GGT------GACAAAGGTAAA---AAGTTT------------------------------------TTCGTACAG---CTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------AACGAGTGG------------------TGGGGCTTC---TTTTTGGTTGCATGCGTCCTCGAACTTTTAATTGTTGCGACGCTC---------------TAC------ACT---GGCCTTGGGTCCGCCATCAACTCAGCC---------------CCAGCGCCTATC---GCT---AAA---GCA---CTC---AAT---ACAATG---AGACTGTTCATTTTGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAINSA-----PAPI-A-K-A-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927455 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_4e49e6d29deda2368b28736692f51318 gb|KJ927455| PRGD_OTU010_4e49e6d29deda2368b28736692f51318, putative proteorhodopsin gene, partial cds. PRGD_OTU010_4e49e6d29deda2368b28736692f51318, putative proteorhodopsin gene, partial cds. KJ927455 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 01-juil-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTTGGTGACAAAGGTAAAAAGTTTTTCGTACAGCTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAGACTTCACCAGTTGCCTCAAACGAGTGGTGGGGATTTTTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTTGCGACGCTCTACACTGGCCTTGGGTCCGCCATCAACTCAGCCCCAGCGCCTATCGCTAAAGCACTCAATACAATGAGACTGTTCATTTTGATA LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAINSAPAPIAKALNTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTT---------GGT------GACAAAGGTAAA---AAGTTT------------------------------------TTCGTACAG---CTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------AACGAGTGG------------------TGGGGATTT---TTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTTGCGACGCTC---------------TAC------ACT---GGCCTTGGGTCCGCCATCAACTCAGCC---------------CCAGCGCCTATC---GCT---AAA---GCA---CTC---AAT---ACAATG---AGACTGTTCATTTTGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAINSA-----PAPI-A-K-A-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927480 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_be8bd0ded04da77217d67ec4534b5c14 gb|KJ927480| PRGD_OTU010_be8bd0ded04da77217d67ec4534b5c14, putative proteorhodopsin gene, partial cds. PRGD_OTU010_be8bd0ded04da77217d67ec4534b5c14, putative proteorhodopsin gene, partial cds. KJ927480 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 01-juil-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTTGGTGACAAAGGTAAAAAGTTTTTCGTACAGCTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAGACTTCACCAGTTGCCTCAAACGAGTGGTGGGGATTTTTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTAGCAACTCTCTACACAGGTCTTGGCTCTGCCATCAACTCAGCCCCAGCGCCTATCGCTAAAGCACTCAATACAATGAGACTGTTCATTTTGATA LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAINSAPAPIAKALNTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTT---------GGT------GACAAAGGTAAA---AAGTTT------------------------------------TTCGTACAG---CTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------AACGAGTGG------------------TGGGGATTT---TTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTAGCAACTCTC---------------TAC------ACA---GGTCTTGGCTCTGCCATCAACTCAGCC---------------CCAGCGCCTATC---GCT---AAA---GCA---CTC---AAT---ACAATG---AGACTGTTCATTTTGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAINSA-----PAPI-A-K-A-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927459 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_5cddf9e5c614c7e1aecfd74080bd56c9 gb|KJ927459| PRGD_OTU010_5cddf9e5c614c7e1aecfd74080bd56c9, putative proteorhodopsin gene, partial cds. PRGD_OTU010_5cddf9e5c614c7e1aecfd74080bd56c9, putative proteorhodopsin gene, partial cds. KJ927459 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 01-juil-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), English Channel (48.7717, -3.9683) CTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTTGGTGACAAAGGTAAAAAGTTTTTCGTACAGCTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAGACTTCACCAGTTGCCTCAAACGAGTGGTGGGGATTTTTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTAGCAACTCTCTACACAGGTCTTGGCTCTGCCATAAAAGCAGCTCCAGCTCCTATCGCTAAAGCACTCAATACAATGAGACTGTTCATTTTGATA LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAIKAAPAPIAKALNTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTT---------GGT------GACAAAGGTAAA---AAGTTT------------------------------------TTCGTACAG---CTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------AACGAGTGG------------------TGGGGATTT---TTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTAGCAACTCTC---------------TAC------ACA---GGTCTTGGCTCTGCCATAAAAGCAGCT---------------CCAGCTCCTATC---GCT---AAA---GCA---CTC---AAT---ACAATG---AGACTGTTCATTTTGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAIKAA-----PAPI-A-K-A-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927464 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_6ebc8675882dab38b1d9da6b68865407 gb|KJ927464| PRGD_OTU010_6ebc8675882dab38b1d9da6b68865407, putative proteorhodopsin gene, partial cds. PRGD_OTU010_6ebc8675882dab38b1d9da6b68865407, putative proteorhodopsin gene, partial cds. KJ927464 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTTGGTGACAAAGGTAAAAAGTTTTTCGTACAGCTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAGACTTCACCAGTTGCCTCAAACGAGTGGTGGGGATTTTTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTAGCAACTCTCTACACAGGTCTTGGCTCTGCCATAAAAGCAGCTCCAGCTCCTATTGCCAAGGCTCTTGATACAATGAGACTGTTCATTTTGATA LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAIKAAPAPIAKALDTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTT---------GGT------GACAAAGGTAAA---AAGTTT------------------------------------TTCGTACAG---CTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------AACGAGTGG------------------TGGGGATTT---TTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTAGCAACTCTC---------------TAC------ACA---GGTCTTGGCTCTGCCATAAAAGCAGCT---------------CCAGCTCCTATT---GCC---AAG---GCT---CTT---GAT---ACAATG---AGACTGTTCATTTTGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAIKAA-----PAPI-A-K-A-L-D-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927444 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_0c26296f8b4084655229dabd47d860b8 gb|KJ927444| PRGD_OTU010_0c26296f8b4084655229dabd47d860b8, putative proteorhodopsin gene, partial cds. PRGD_OTU010_0c26296f8b4084655229dabd47d860b8, putative proteorhodopsin gene, partial cds. KJ927444 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683) CTCTTTACAACGCCCTTAATGCTTATCAAGTTCCCACTCTTACTGAGGCTTGGTGATAAAGGTAAAAAGTTCTTTGTGCAGCTTGTAACCCTTGATATAGGCATGATTGTCTGCGCCTTCATTGCAGAGACTTCACCAGTTGCTTCAACGGAATGGTGGGGCTTCTTTTTGGTTGCATGCGTCCTCGAACTTTTAATTGTAGCAACTCTCTACACAGGTCTTGGCTCTGCCATAAAAGCAGCTCCAGCTCCTATTGCCAAGGCTCTTGATACGATGCGGTTGTTCATTCTTATA LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASTEWWGFFLVACVLELLIVATLYTGLGSAIKAAPAPIAKALDTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACGCCCTTAATGCTTATCAAGTTCCCACTCTTACTGAGGCTT---------GGT------GATAAAGGTAAA---AAGTTC------------------------------------TTTGTGCAG---CTTGTAACCCTTGATATAGGCATGATTGTCTGCGCCTTCATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCT---------TCA---------------------------ACGGAATGG------------------TGGGGCTTC---TTTTTGGTTGCATGCGTCCTCGAACTTTTAATTGTAGCAACTCTC---------------TAC------ACA---GGTCTTGGCTCTGCCATAAAAGCAGCT---------------CCAGCTCCTATT---GCC---AAG---GCT---CTT---GAT---ACGATG---CGGTTGTTCATTCTTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------TEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAIKAA-----PAPI-A-K-A-L-D-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927490 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_da8a0068c8d29be278ece1b50cfa8314 gb|KJ927490| PRGD_OTU010_da8a0068c8d29be278ece1b50cfa8314, putative proteorhodopsin gene, partial cds. PRGD_OTU010_da8a0068c8d29be278ece1b50cfa8314, putative proteorhodopsin gene, partial cds. KJ927490 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 01-juil-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTCTTTACAACGCCCTTAATGCTTATCAAGTTCCCACTCTTACTGAGGCTTGGTGATAAAGGTAAAAAGTTCTTTGTGCAGCTTGTAACCCTTGATATAGGCATGATTGTCTGCGCCTTCATTGCAGAGACTTCACCAGTTGCCTCAAACGAGTGGTGGGGATTTTTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTAGCAACTCTCTACACAGGTCTTGGCTCTGCCATAAAAGCAGCTCCAGCTCCTATTGCCAAGGCTCTTGATACGATGCGGTTGTTCATTCTTATA LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAIKAAPAPIAKALDTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACGCCCTTAATGCTTATCAAGTTCCCACTCTTACTGAGGCTT---------GGT------GATAAAGGTAAA---AAGTTC------------------------------------TTTGTGCAG---CTTGTAACCCTTGATATAGGCATGATTGTCTGCGCCTTCATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------AACGAGTGG------------------TGGGGATTT---TTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTAGCAACTCTC---------------TAC------ACA---GGTCTTGGCTCTGCCATAAAAGCAGCT---------------CCAGCTCCTATT---GCC---AAG---GCT---CTT---GAT---ACGATG---CGGTTGTTCATTCTTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAIKAA-----PAPI-A-K-A-L-D-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927454 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_49168c5a65d98a03bedd5ad4a4305882 gb|KJ927454| PRGD_OTU010_49168c5a65d98a03bedd5ad4a4305882, putative proteorhodopsin gene, partial cds. PRGD_OTU010_49168c5a65d98a03bedd5ad4a4305882, putative proteorhodopsin gene, partial cds. KJ927454 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCACTCTTACTGAGGCTTGGTGATAAAGGTAAAAAGTTCTTTGTGCAGCTTGTAACCCTTGATATAGGCATGATTGTTTGTGCGTTTATTGCAGAGACTTCACCAGTTGCCTCAAACGAGTGGTGGGGATTTTTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTAGCAACTCTCTACACAGGTCTTGGCTCTGCCATAAAAGCAGCTCCAGCTCCTATTGCCAAGGCTCTTGATACGATGCGGTTGTTCATTCTTATA LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAIKAAPAPIAKALDTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCACTCTTACTGAGGCTT---------GGT------GATAAAGGTAAA---AAGTTC------------------------------------TTTGTGCAG---CTTGTAACCCTTGATATAGGCATGATTGTTTGTGCGTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------AACGAGTGG------------------TGGGGATTT---TTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTAGCAACTCTC---------------TAC------ACA---GGTCTTGGCTCTGCCATAAAAGCAGCT---------------CCAGCTCCTATT---GCC---AAG---GCT---CTT---GAT---ACGATG---CGGTTGTTCATTCTTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAIKAA-----PAPI-A-K-A-L-D-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927474 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_961a7ca7f9012b6ca2308db43009c0d2 gb|KJ927474| PRGD_OTU010_961a7ca7f9012b6ca2308db43009c0d2, putative proteorhodopsin gene, partial cds. PRGD_OTU010_961a7ca7f9012b6ca2308db43009c0d2, putative proteorhodopsin gene, partial cds. KJ927474 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 01-juil-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTCTTTACAACGCCCTTAATGCTTATCAAGTTCCCACTCTTACTGAGGCTTGGTGATAAAGGTAAAAAGTTTTTCGTACAGCTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAGACTTCACCAGTTGCCTCAAACGAGTGGTGGGGATTTTTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTAGCAACTCTCTACACAGGTCTTGGCTCTGCCATAAAAGCAGCTCCAGCTCCTATTGCCAAGGCTCTTGATACGATGCGGTTGTTCATTCTTATA LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAIKAAPAPIAKALDTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACGCCCTTAATGCTTATCAAGTTCCCACTCTTACTGAGGCTT---------GGT------GATAAAGGTAAA---AAGTTT------------------------------------TTCGTACAG---CTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------AACGAGTGG------------------TGGGGATTT---TTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTAGCAACTCTC---------------TAC------ACA---GGTCTTGGCTCTGCCATAAAAGCAGCT---------------CCAGCTCCTATT---GCC---AAG---GCT---CTT---GAT---ACGATG---CGGTTGTTCATTCTTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAIKAA-----PAPI-A-K-A-L-D-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927441 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_otuREP_e388ec721d700398242033163af92eca gb|KJ927441| PRGD_OTU010_otuREP_e388ec721d700398242033163af92eca, putative proteorhodopsin gene, partial cds. PRGD_OTU010_otuREP_e388ec721d700398242033163af92eca, putative proteorhodopsin gene, partial cds. KJ927441 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTTGGTGACAAAGGTAAAAAGTTTTTCGTACAGCTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAGACTTCACCAGTTGCCTCAAACGAGTGGTGGGGATTTTTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTAGCAACTCTCTACACAGGTCTTGGCTCTGCCATAAAAGCAGCTCCAGCTCCTATTGCCAAGGCTCTTGATACGATGCGGTTGTTCATTCTTATA LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAIKAAPAPIAKALDTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTT---------GGT------GACAAAGGTAAA---AAGTTT------------------------------------TTCGTACAG---CTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------AACGAGTGG------------------TGGGGATTT---TTCCTGGTCGCGTGCGTCCTCGAACTTTTAATTGTAGCAACTCTC---------------TAC------ACA---GGTCTTGGCTCTGCCATAAAAGCAGCT---------------CCAGCTCCTATT---GCC---AAG---GCT---CTT---GAT---ACGATG---CGGTTGTTCATTCTTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAIKAA-----PAPI-A-K-A-L-D-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927466 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_7a68ef334b894179009b7486e3882480 gb|KJ927466| PRGD_OTU010_7a68ef334b894179009b7486e3882480, putative proteorhodopsin gene, partial cds. PRGD_OTU010_7a68ef334b894179009b7486e3882480, putative proteorhodopsin gene, partial cds. KJ927466 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTCTTTACAACTCCCTTGATGCTCATTAAGTTCCCACTCTTGCTGCGGCTTGGTGACAAAGGTAAAAAGTTTTTTGTACAGCTTGTAACGCTTGACATCGGAATGATAGTTTGTGCTTTTATTGCAGAGACTTCACCAGTTGCTTCAAATGAGTGGTGGGGATTCTTCCTGGTCGCGTGCGTCCTGGAACTTTTAATTGTTGCAACTCTCTACACAGGTCTTGGCTCTGCCATAAAAGCAGCTCCAGCTCCTATTGCCAAGGCACTTGATACGATGAGGTTGTTCATCCTGATC LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAIKAAPAPIAKALDTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACTCCCTTGATGCTCATTAAGTTCCCACTCTTGCTGCGGCTT---------GGT------GACAAAGGTAAA---AAGTTT------------------------------------TTTGTACAG---CTTGTAACGCTTGACATCGGAATGATAGTTTGTGCTTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCT---------TCA---------------------------AATGAGTGG------------------TGGGGATTC---TTCCTGGTCGCGTGCGTCCTGGAACTTTTAATTGTTGCAACTCTC---------------TAC------ACA---GGTCTTGGCTCTGCCATAAAAGCAGCT---------------CCAGCTCCTATT---GCC---AAG---GCA---CTT---GAT---ACGATG---AGGTTGTTCATCCTGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAIKAA-----PAPI-A-K-A-L-D-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927475 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_963b60473cbf6e59ac50546e728cb913 gb|KJ927475| PRGD_OTU010_963b60473cbf6e59ac50546e728cb913, putative proteorhodopsin gene, partial cds. PRGD_OTU010_963b60473cbf6e59ac50546e728cb913, putative proteorhodopsin gene, partial cds. KJ927475 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCTTTACAACTCCCTTGATGCTCATTAAGTTCCCACTCTTGCTGCGGCTTGGTGACAAAGGTAAAAAGTTTTTTGTACAGCTTGTAACGCTTGACATCGGAATGATAGTTTGTGCTTTTATTGCAGAGACTTCACCAGTTGCTTCAAATGAGTGGTGGGGATTCTTCCTGGTCGCGTGCGTCCTGGAACTTTTAATTGTTGCAACTCTCTACACAGGTCTTGGCTCTGCCATAAAAGCAGCTCCAGCTCCTATTGCCAAGGCTCTTGATACGATGCGGTTGTTCATTCTTATA LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAIKAAPAPIAKALDTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACTCCCTTGATGCTCATTAAGTTCCCACTCTTGCTGCGGCTT---------GGT------GACAAAGGTAAA---AAGTTT------------------------------------TTTGTACAG---CTTGTAACGCTTGACATCGGAATGATAGTTTGTGCTTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCT---------TCA---------------------------AATGAGTGG------------------TGGGGATTC---TTCCTGGTCGCGTGCGTCCTGGAACTTTTAATTGTTGCAACTCTC---------------TAC------ACA---GGTCTTGGCTCTGCCATAAAAGCAGCT---------------CCAGCTCCTATT---GCC---AAG---GCT---CTT---GAT---ACGATG---CGGTTGTTCATTCTTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAIKAA-----PAPI-A-K-A-L-D-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927467 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_7b9810623273c565b04e9e9f5c5b9fa5 gb|KJ927467| PRGD_OTU010_7b9810623273c565b04e9e9f5c5b9fa5, putative proteorhodopsin gene, partial cds. PRGD_OTU010_7b9810623273c565b04e9e9f5c5b9fa5, putative proteorhodopsin gene, partial cds. KJ927467 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTTGGTGACAAAGGTAAAAAGTTTTTTGTACAGCTTGTAACGCTTGACATCGGAATGATAGTTTGTGCTTTTATTGCAGAGACTTCACCAGTTGCTTCAAATGAGTGGTGGGGATTCTTCCTGGTCGCGTGCGTCCTGGAACTTTTAATTGTTGCAACTCTCTACACAGGTCTTGGCTCTGCCATAAAAGCAGCTCCAGCTCCTATTGCCAAGGCACTTGATACGATGAGGTTGTTCATCCTGATC LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAIKAAPAPIAKALDTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTT---------GGT------GACAAAGGTAAA---AAGTTT------------------------------------TTTGTACAG---CTTGTAACGCTTGACATCGGAATGATAGTTTGTGCTTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCT---------TCA---------------------------AATGAGTGG------------------TGGGGATTC---TTCCTGGTCGCGTGCGTCCTGGAACTTTTAATTGTTGCAACTCTC---------------TAC------ACA---GGTCTTGGCTCTGCCATAAAAGCAGCT---------------CCAGCTCCTATT---GCC---AAG---GCA---CTT---GAT---ACGATG---AGGTTGTTCATCCTGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAIKAA-----PAPI-A-K-A-L-D-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927494 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_ef50d20a77e62fc82fb142723bb720f6 gb|KJ927494| PRGD_OTU010_ef50d20a77e62fc82fb142723bb720f6, putative proteorhodopsin gene, partial cds. PRGD_OTU010_ef50d20a77e62fc82fb142723bb720f6, putative proteorhodopsin gene, partial cds. KJ927494 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683) CTCTTTACGACGCCCTTGATGCTCATTAAGTTCCCACTCTTGCTGCGGCTTGGTGACAAAGGTAAAAAGTTTTTTGTACAGCTTGTAACGCTTGACATCGGAATGATTGTTTGTGCTTTTATTGCAGAGACTTCACCAGTTGCTTCAAACGAGTGGTGGGGATTCTTCCTGGTCGCGTGCGTCCTAGAACTTTTAATTGTTGCAACTCTCTACACAGGTCTTGGCTCTGCCATAAAAGCAGCTCCAGCTCCTATTGCCAAGGCGCTTGATACGATGAGGTTGTTCATCCTGATC LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAIKAAPAPIAKALDTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACGACGCCCTTGATGCTCATTAAGTTCCCACTCTTGCTGCGGCTT---------GGT------GACAAAGGTAAA---AAGTTT------------------------------------TTTGTACAG---CTTGTAACGCTTGACATCGGAATGATTGTTTGTGCTTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCT---------TCA---------------------------AACGAGTGG------------------TGGGGATTC---TTCCTGGTCGCGTGCGTCCTAGAACTTTTAATTGTTGCAACTCTC---------------TAC------ACA---GGTCTTGGCTCTGCCATAAAAGCAGCT---------------CCAGCTCCTATT---GCC---AAG---GCG---CTT---GAT---ACGATG---AGGTTGTTCATCCTGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAIKAA-----PAPI-A-K-A-L-D-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927503 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_feafa2e8b3893c91e0cbe4c014908704 gb|KJ927503| PRGD_OTU010_feafa2e8b3893c91e0cbe4c014908704, putative proteorhodopsin gene, partial cds. PRGD_OTU010_feafa2e8b3893c91e0cbe4c014908704, putative proteorhodopsin gene, partial cds. KJ927503 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683) CTCTTTACGACGCCCTTGATGCTCATTAAGTTCCCACTCTTGCTGCGGCTTGGTGACAAAGGTAAAAAGTTTTTTGTACAGCTTGTAACGCTTGACATCGGAATGATTGTTTGTGCTTTTATTGCAGAGACTTCACCAGTTGCTTCAAACGAGTGGTGGGGATTCTTCCTGGTCGCGTGCGTCCTAGAACTTTTAATTGTTGCAACTCTCTACACAGGTCTTGGCTCTGCCATAAAAGCAGCTCCAGCTCCTATTGCCAAGGCTCTTGATACGATGCGGTTGTTCATTCTTATA LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAIKAAPAPIAKALDTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACGACGCCCTTGATGCTCATTAAGTTCCCACTCTTGCTGCGGCTT---------GGT------GACAAAGGTAAA---AAGTTT------------------------------------TTTGTACAG---CTTGTAACGCTTGACATCGGAATGATTGTTTGTGCTTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCT---------TCA---------------------------AACGAGTGG------------------TGGGGATTC---TTCCTGGTCGCGTGCGTCCTAGAACTTTTAATTGTTGCAACTCTC---------------TAC------ACA---GGTCTTGGCTCTGCCATAAAAGCAGCT---------------CCAGCTCCTATT---GCC---AAG---GCT---CTT---GAT---ACGATG---CGGTTGTTCATTCTTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAIKAA-----PAPI-A-K-A-L-D-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927456 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_53c88042caf6af450589bcb274fbc615 gb|KJ927456| PRGD_OTU010_53c88042caf6af450589bcb274fbc615, putative proteorhodopsin gene, partial cds. PRGD_OTU010_53c88042caf6af450589bcb274fbc615, putative proteorhodopsin gene, partial cds. KJ927456 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTCTTTACAACACCGTTAATGCTTATCAAGTTCCCACTCTTACTGCGACTTGGTGACAAGGGCAAAAAGTTTTTTGTACAACTCGTAACACTTGACATAGGCATGATTGTTTGTGCTTTTATTGCAGAGACTTCACCAGTTGCCTCAAACGAGTGGTGGGGATTCTTCCTAGTCGCGTGCGTCCTCGAGCTTTTAATTGTTGCAACTCTTTACACAGGTCTTGGCTCTGCCATAAAAGCAGCTCCTGCTCCTATTGCCAAGGCGCTTGATACGATGAGGTTGTTCATCCTGATC LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAIKAAPAPIAKALDTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACACCGTTAATGCTTATCAAGTTCCCACTCTTACTGCGACTT---------GGT------GACAAGGGCAAA---AAGTTT------------------------------------TTTGTACAA---CTCGTAACACTTGACATAGGCATGATTGTTTGTGCTTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------AACGAGTGG------------------TGGGGATTC---TTCCTAGTCGCGTGCGTCCTCGAGCTTTTAATTGTTGCAACTCTT---------------TAC------ACA---GGTCTTGGCTCTGCCATAAAAGCAGCT---------------CCTGCTCCTATT---GCC---AAG---GCG---CTT---GAT---ACGATG---AGGTTGTTCATCCTGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAIKAA-----PAPI-A-K-A-L-D-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927499 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_fad4123d5bc85e49f789880dbc844cf9 gb|KJ927499| PRGD_OTU010_fad4123d5bc85e49f789880dbc844cf9, putative proteorhodopsin gene, partial cds. PRGD_OTU010_fad4123d5bc85e49f789880dbc844cf9, putative proteorhodopsin gene, partial cds. KJ927499 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.935, 18.508), Indian Ocean (-35.05, 23.73) CTCTTTACAACACCGTTAATGCTTATCAAGTTCCCACTCTTACTGCGACTTGGTGACAAGGGCAAAAAGTTTTTCGTACAACTCGTAACGCTTGACATAGGCATGATTGTTTGTGCTTTTATTGCAGAGACTTCACCAGTTGCCTCAAACAAGTGGTGGGGATTCTTCCTAGTCGCGTGCGTCCTCGAACTTTTAATTGTTGCAACTCTTTACACAGGTCTTGGCTCTGCCATAAAAGCAGCTCCTGCTCCAATCGCCAAGGCGCTTGATACGATGAGGTTGTTCATCCTGATT LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNKWWGFFLVACVLELLIVATLYTGLGSAIKAAPAPIAKALDTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACACCGTTAATGCTTATCAAGTTCCCACTCTTACTGCGACTT---------GGT------GACAAGGGCAAA---AAGTTT------------------------------------TTCGTACAA---CTCGTAACGCTTGACATAGGCATGATTGTTTGTGCTTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------AACAAGTGG------------------TGGGGATTC---TTCCTAGTCGCGTGCGTCCTCGAACTTTTAATTGTTGCAACTCTT---------------TAC------ACA---GGTCTTGGCTCTGCCATAAAAGCAGCT---------------CCTGCTCCAATC---GCC---AAG---GCG---CTT---GAT---ACGATG---AGGTTGTTCATCCTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NKW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAIKAA-----PAPI-A-K-A-L-D-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927478 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_ad9fb912db57a7d21065399baa168692 gb|KJ927478| PRGD_OTU010_ad9fb912db57a7d21065399baa168692, putative proteorhodopsin gene, partial cds. PRGD_OTU010_ad9fb912db57a7d21065399baa168692, putative proteorhodopsin gene, partial cds. KJ927478 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683), Mediterranean Sea (33.935, 18.508) CTCTTTACAACACCGTTAATGCTTATCAAGTTTCCACTCTTATTGCGGCTTGGTGACAAGGGCAAAAAGTTTTTCGTACAACTCGTAACGCTTGACATAGGCATGATTGTTTGTGCTTTTATTGCAGAGACTTCACCAGTTGCCTCAAACGAGTGGTGGGGATTCTTCCTAGTCGCGTGCGTCCTCGAACTTTTAATTGTAGCAACTCTCTACACAGGTCTTGGCTCTGCCATAAAAGCAGCTCCAGCTCCTATTGCCAAGGCTCTTGATACGATGCGGTTGTTCATTCTTATA LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAIKAAPAPIAKALDTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACACCGTTAATGCTTATCAAGTTTCCACTCTTATTGCGGCTT---------GGT------GACAAGGGCAAA---AAGTTT------------------------------------TTCGTACAA---CTCGTAACGCTTGACATAGGCATGATTGTTTGTGCTTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------AACGAGTGG------------------TGGGGATTC---TTCCTAGTCGCGTGCGTCCTCGAACTTTTAATTGTAGCAACTCTC---------------TAC------ACA---GGTCTTGGCTCTGCCATAAAAGCAGCT---------------CCAGCTCCTATT---GCC---AAG---GCT---CTT---GAT---ACGATG---CGGTTGTTCATTCTTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAIKAA-----PAPI-A-K-A-L-D-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927497 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_f75298a9d93dd87f89241b6092eda154 gb|KJ927497| PRGD_OTU010_f75298a9d93dd87f89241b6092eda154, putative proteorhodopsin gene, partial cds. PRGD_OTU010_f75298a9d93dd87f89241b6092eda154, putative proteorhodopsin gene, partial cds. KJ927497 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTCTTTACAACACCGTTAATGCTTATCAAGTTTCCACTCTTATTGCGGCTTGGTGACAAGGGCAAAAAGTTTTTCGTACAACTCGTAACGCTTGACATAGGCATGATTGTTTGTGCTTTTATTGCAGAGACTTCACCAGTTGCCTCAAACGAGTGGTGGGGATTCTTCCTAGTCGCGTGCGTCCTCGAACTTTTAATTGTTGCAACTCTTTACACAGGTCTTGGCTCTGCCATAAAAGCAGCTCCTGCTCCTATTGCCAAGGCGCTTGATACGATGAGGTTGTTCATCCTGATT LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAIKAAPAPIAKALDTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACACCGTTAATGCTTATCAAGTTTCCACTCTTATTGCGGCTT---------GGT------GACAAGGGCAAA---AAGTTT------------------------------------TTCGTACAA---CTCGTAACGCTTGACATAGGCATGATTGTTTGTGCTTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------AACGAGTGG------------------TGGGGATTC---TTCCTAGTCGCGTGCGTCCTCGAACTTTTAATTGTTGCAACTCTT---------------TAC------ACA---GGTCTTGGCTCTGCCATAAAAGCAGCT---------------CCTGCTCCTATT---GCC---AAG---GCG---CTT---GAT---ACGATG---AGGTTGTTCATCCTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAIKAA-----PAPI-A-K-A-L-D-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927482 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_c0bf8b39c73b6c283f06ca5f4d74ce56 gb|KJ927482| PRGD_OTU010_c0bf8b39c73b6c283f06ca5f4d74ce56, putative proteorhodopsin gene, partial cds. PRGD_OTU010_c0bf8b39c73b6c283f06ca5f4d74ce56, putative proteorhodopsin gene, partial cds. KJ927482 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683) CTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTTGGTGACAAAGGTAAAAAGTTTTTCGTACAACTCGTAACGCTTGACATAGGCATGATTGTTTGTGCTTTTATTGCAGAGACTTCACCAGTTGCCTCAAACGAGTGGTGGGGATTCTTCCTAGTCGCGTGCGTCCTCGAACTTTTAATTGTTGCAACTCTTTACACAGGTCTTGGCTCTGCCATAAAAGCAGCTCCTGCTCCTATTGCCAAGGCGCTTGATACGATGAGGTTGTTCATCCTGATT LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFLVACVLELLIVATLYTGLGSAIKAAPAPIAKALDTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTT---------GGT------GACAAAGGTAAA---AAGTTT------------------------------------TTCGTACAA---CTCGTAACGCTTGACATAGGCATGATTGTTTGTGCTTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------AACGAGTGG------------------TGGGGATTC---TTCCTAGTCGCGTGCGTCCTCGAACTTTTAATTGTTGCAACTCTT---------------TAC------ACA---GGTCTTGGCTCTGCCATAAAAGCAGCT---------------CCTGCTCCTATT---GCC---AAG---GCG---CTT---GAT---ACGATG---AGGTTGTTCATCCTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAIKAA-----PAPI-A-K-A-L-D-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927445 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_0c76cb4098bc816b8b531aeb2cd54971 gb|KJ927445| PRGD_OTU010_0c76cb4098bc816b8b531aeb2cd54971, putative proteorhodopsin gene, partial cds. PRGD_OTU010_0c76cb4098bc816b8b531aeb2cd54971, putative proteorhodopsin gene, partial cds. KJ927445 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTTTTTACAACACCCTTGATGCTGATCAAGTTCCCACTATTACTGCGCCTTGGTGACAAGGGTAAAAAATTCTTTGTACAGCTCGTAACACTTGATATAGGCATGATTGTCTGTGCCTTCATTGCGGAGACTTCACCAGTTGCCTCAACATCATGGTGGGGATTCTTTTTGGTTGCATGCGTCCTTGAACTTCTAATTGTTGCAACGTTATACACCGGGCTTGGTTCTGCGATAGGAGAAGCGCCTGCCCCGCTAGCTAAAGCACTTAACACCATGAGGTTATTTATCCTGATC LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASTSWWGFFLVACVLELLIVATLYTGLGSAIGEAPAPLAKALNTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTTACAACACCCTTGATGCTGATCAAGTTCCCACTATTACTGCGCCTT---------GGT------GACAAGGGTAAA---AAATTC------------------------------------TTTGTACAG---CTCGTAACACTTGATATAGGCATGATTGTCTGTGCCTTCATTGCGGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------ACATCATGG------------------TGGGGATTC---TTTTTGGTTGCATGCGTCCTTGAACTTCTAATTGTTGCAACGTTA---------------TAC------ACC---GGGCTTGGTTCTGCGATAGGAGAAGCG---------------CCTGCCCCGCTA---GCT---AAA---GCA---CTT---AAC---ACCATG---AGGTTATTTATCCTGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------TSW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAIGEA-----PAPL-A-K-A-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927501 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_fc238cf218ad671016d39d81718a37f2 gb|KJ927501| PRGD_OTU010_fc238cf218ad671016d39d81718a37f2, putative proteorhodopsin gene, partial cds. PRGD_OTU010_fc238cf218ad671016d39d81718a37f2, putative proteorhodopsin gene, partial cds. KJ927501 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) CTTTTTACAACACCCTTGATGCTGATCAAGTTCCCACTATTACTACGCCTTGGTGACAAGGGTAAAAAATTCTTTGTACAGCTCGTAACGCTTGATATAGGCATGATTGTCTGTGCCTTCATTGCGGAGACTTCACCAGTTGCCTCAACATCATGGTGGGGATTCTTCTTGGTTGCATGCGTCCTTGAACTTCTGATTGTTGCAACGCTATACACCGGGCTTGGTTCTGCGATAGGAGAAGCGCCTGCCCCGCTAGCTAAAGCGCTCAACACTATGAGGTTATTCATACTGATC LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASTSWWGFFLVACVLELLIVATLYTGLGSAIGEAPAPLAKALNTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTTACAACACCCTTGATGCTGATCAAGTTCCCACTATTACTACGCCTT---------GGT------GACAAGGGTAAA---AAATTC------------------------------------TTTGTACAG---CTCGTAACGCTTGATATAGGCATGATTGTCTGTGCCTTCATTGCGGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------ACATCATGG------------------TGGGGATTC---TTCTTGGTTGCATGCGTCCTTGAACTTCTGATTGTTGCAACGCTA---------------TAC------ACC---GGGCTTGGTTCTGCGATAGGAGAAGCG---------------CCTGCCCCGCTA---GCT---AAA---GCG---CTC---AAC---ACTATG---AGGTTATTCATACTGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------TSW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAIGEA-----PAPL-A-K-A-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927495 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_f33e0f2386da15e3f60e1c73bb7f8e61 gb|KJ927495| PRGD_OTU010_f33e0f2386da15e3f60e1c73bb7f8e61, putative proteorhodopsin gene, partial cds. PRGD_OTU010_f33e0f2386da15e3f60e1c73bb7f8e61, putative proteorhodopsin gene, partial cds. KJ927495 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.935, 18.508), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) CTTTTTACAACACCCTTGATGCTGATCAAGTTCCCATTATTACTGCGCCTTGGTGACAAGGGTAAAAAATTCTTTGTACAGCTTGTAACACTTGATATAGGCATGATTGTTTGTGCCTTCATTGCGGAGACTTCACCAGTTGCCTCAACATCATGGTGGGGATTCTTTTTGGTTGCATGCGTCCTTGAACTTCTAATTGTTGCAACGCTATACACCGGGCTTGGTTCTGCGATAGGAGAAGCGCCTGCCCCGCTAGCTAAAGCACTCAACACTATGAGGTTATTCATACTGATC LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASTSWWGFFLVACVLELLIVATLYTGLGSAIGEAPAPLAKALNTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTTACAACACCCTTGATGCTGATCAAGTTCCCATTATTACTGCGCCTT---------GGT------GACAAGGGTAAA---AAATTC------------------------------------TTTGTACAG---CTTGTAACACTTGATATAGGCATGATTGTTTGTGCCTTCATTGCGGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------ACATCATGG------------------TGGGGATTC---TTTTTGGTTGCATGCGTCCTTGAACTTCTAATTGTTGCAACGCTA---------------TAC------ACC---GGGCTTGGTTCTGCGATAGGAGAAGCG---------------CCTGCCCCGCTA---GCT---AAA---GCA---CTC---AAC---ACTATG---AGGTTATTCATACTGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------TSW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAIGEA-----PAPL-A-K-A-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927489 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_d6f8c7b941adba50d22a9ea879da8227 gb|KJ927489| PRGD_OTU010_d6f8c7b941adba50d22a9ea879da8227, putative proteorhodopsin gene, partial cds. PRGD_OTU010_d6f8c7b941adba50d22a9ea879da8227, putative proteorhodopsin gene, partial cds. KJ927489 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTTTTTACAACACCCTTGATGCTGATCAAGTTCCCACTATTACTGCGCCTTGGTGACAAGGGTAAAAAATTCTTTGTACAACTTGTAACACTTGATATTGGCATGATTGTTTGTGCCTTCATTGCGGAAACTTCACCAGTTGCCTCAACATCATGGTGGGGGTTCTTTTTGGTTGCATGCGTCCTTGAACTTCTAATTGTTGCAACGCTATACACCGGGCTTGGTTCTGCGATAGGAGAAGCGCCTGCCCCGCTAGCTAAAGCACTCAACACTATGAGGTTATTCATACTGATC LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASTSWWGFFLVACVLELLIVATLYTGLGSAIGEAPAPLAKALNTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTTACAACACCCTTGATGCTGATCAAGTTCCCACTATTACTGCGCCTT---------GGT------GACAAGGGTAAA---AAATTC------------------------------------TTTGTACAA---CTTGTAACACTTGATATTGGCATGATTGTTTGTGCCTTCATTGCGGAA---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------ACATCATGG------------------TGGGGGTTC---TTTTTGGTTGCATGCGTCCTTGAACTTCTAATTGTTGCAACGCTA---------------TAC------ACC---GGGCTTGGTTCTGCGATAGGAGAAGCG---------------CCTGCCCCGCTA---GCT---AAA---GCA---CTC---AAC---ACTATG---AGGTTATTCATACTGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------TSW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAIGEA-----PAPL-A-K-A-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927447 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_1a1114bf9a8358daf89388ddb7c414b5 gb|KJ927447| PRGD_OTU010_1a1114bf9a8358daf89388ddb7c414b5, putative proteorhodopsin gene, partial cds. PRGD_OTU010_1a1114bf9a8358daf89388ddb7c414b5, putative proteorhodopsin gene, partial cds. KJ927447 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) CTTTTTACAACACCCTTGATGCTGATCAAGTTCCCACTTCTTCTGCGGCTTGGTGACAAGGGTAAAAAATTCTTTGTTCAGCTTGTAACACTTGATATAGGCATGATTGTTTGTGCCTTTATTGCAGAGACTTCACCGGTTGCCTCAACATCATGGTGGGGATTCTTTTTGGTTGCATGCGTCCTCGAACTTCTAATTGTTGCAACTCTGTACACCGGGCTTGGTTCTGCGATAGGAGAAGCACCCGCCCCGCTAGCTAAAGCGCTCAACACTATGAGGTTATTTATACTGATC LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASTSWWGFFLVACVLELLIVATLYTGLGSAIGEAPAPLAKALNTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTTACAACACCCTTGATGCTGATCAAGTTCCCACTTCTTCTGCGGCTT---------GGT------GACAAGGGTAAA---AAATTC------------------------------------TTTGTTCAG---CTTGTAACACTTGATATAGGCATGATTGTTTGTGCCTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCG---GTTGCC---------TCA---------------------------ACATCATGG------------------TGGGGATTC---TTTTTGGTTGCATGCGTCCTCGAACTTCTAATTGTTGCAACTCTG---------------TAC------ACC---GGGCTTGGTTCTGCGATAGGAGAAGCA---------------CCCGCCCCGCTA---GCT---AAA---GCG---CTC---AAC---ACTATG---AGGTTATTTATACTGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------TSW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAIGEA-----PAPL-A-K-A-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927457 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_577cf8d3eea804c69714fddef68b5297 gb|KJ927457| PRGD_OTU010_577cf8d3eea804c69714fddef68b5297, putative proteorhodopsin gene, partial cds. PRGD_OTU010_577cf8d3eea804c69714fddef68b5297, putative proteorhodopsin gene, partial cds. KJ927457 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTTTTTACAACACCCTTGATGCTGATCAAGTTCCCACTATTACTGCGCCTTGGTGACAAGGGTAAAAAATTCTTTGTTCAGCTTGTAACACTTGATATAGGCATGATTGTTTGTGCCTTTATTGCAGAGACTTCACCGGTTGCCTCAACATCATGGTGGGGATTCTTTTTGGTTGCATGCGTCCTCGAACTTCTAATTGTTGCAACTCTGTACACCGGGCTTGGTTCTGCGATAGGAGAAGCACCCGCCCCGCTAGCTAAAGCGCTCAACACTATGAGGTTATTTATACTGATC LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASTSWWGFFLVACVLELLIVATLYTGLGSAIGEAPAPLAKALNTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTTACAACACCCTTGATGCTGATCAAGTTCCCACTATTACTGCGCCTT---------GGT------GACAAGGGTAAA---AAATTC------------------------------------TTTGTTCAG---CTTGTAACACTTGATATAGGCATGATTGTTTGTGCCTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCG---GTTGCC---------TCA---------------------------ACATCATGG------------------TGGGGATTC---TTTTTGGTTGCATGCGTCCTCGAACTTCTAATTGTTGCAACTCTG---------------TAC------ACC---GGGCTTGGTTCTGCGATAGGAGAAGCA---------------CCCGCCCCGCTA---GCT---AAA---GCG---CTC---AAC---ACTATG---AGGTTATTTATACTGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------TSW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAIGEA-----PAPL-A-K-A-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927486 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_d38ef7d07cfa8af9010eace9182a9b7a gb|KJ927486| PRGD_OTU010_d38ef7d07cfa8af9010eace9182a9b7a, putative proteorhodopsin gene, partial cds. PRGD_OTU010_d38ef7d07cfa8af9010eace9182a9b7a, putative proteorhodopsin gene, partial cds. KJ927486 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTCTTTACAACGCCGTTGATGCTTATCAAGTTCCCACTCTTACTACGGCTCGGTGACCAGGGTAAAAAGTTTTTTGTACAGCTTGTAACTCTTGACATAGGTATGATTGTCTGTGCCTTTATTGCAGAAACTTCACCAGTTGCTTCAACCCAATGGTGGGGATTCTTCTTAGTCGCGTGTGTCCTCGAACTTTTGATTGTTGCAACGCTCTACACGGGTCTTGGTTCTGCTATAAATGCAGCGCCGGAGCCTCTTGCCAAAGCGCTCGATACGATGCGATTATTTATTCTGATT LFTTPLMLIKFPLLLRLGDQGKKFFVQLVTLDIGMIVCAFIAETSPVASTQWWGFFLVACVLELLIVATLYTGLGSAINAAPEPLAKALDTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACGCCGTTGATGCTTATCAAGTTCCCACTCTTACTACGGCTC---------GGT------GACCAGGGTAAA---AAGTTT------------------------------------TTTGTACAG---CTTGTAACTCTTGACATAGGTATGATTGTCTGTGCCTTTATTGCAGAA---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCT---------TCA---------------------------ACCCAATGG------------------TGGGGATTC---TTCTTAGTCGCGTGTGTCCTCGAACTTTTGATTGTTGCAACGCTC---------------TAC------ACG---GGTCTTGGTTCTGCTATAAATGCAGCG---------------CCGGAGCCTCTT---GCC---AAA---GCG---CTC---GAT---ACGATG---CGATTATTTATTCTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DQGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------TQW------WGF-FLVACVLELLIVATL-----Y--T-GLGSAINAA-----PEPL-A-K-A-L-D-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927477 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_982a8ebda15b3c68bc17a36cde3f342e gb|KJ927477| PRGD_OTU010_982a8ebda15b3c68bc17a36cde3f342e, putative proteorhodopsin gene, partial cds. PRGD_OTU010_982a8ebda15b3c68bc17a36cde3f342e, putative proteorhodopsin gene, partial cds. KJ927477 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Bering strait marine 67.49 -168.12 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Pacific side (67.49, -168.12) CTCTTCACAACGCCGTTGATGCTCATCAAGTTTCCACTTCTTCTTCGAATGGGAGAAAAGGGAACAAAGTTTTTTGTGCAACTCGTTACCCTCGATATTGGCATGATTGTTTGTGCTTTTATCGCAGAGACTTCGCCAATAGGATCACAAGAATGGTGGGGATTCTTTATCGTAGCGTGTGTGCTTGAATTGTTGATTGTGGCAATTCTCTACACAGGTCTCGGCTCTGCTATCAATGCAGCACCAGCACCGATTGCTAAATCACTGAATACCATGCGACTATTCATTCTGATT LFTTPLMLIKFPLLLRMGEKGTKFFVQLVTLDIGMIVCAFIAETSPIGSQEWWGFFIVACVLELLIVAILYTGLGSAINAAPAPIAKSLNTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCACAACGCCGTTGATGCTCATCAAGTTTCCACTTCTTCTTCGAATG---------GGA------GAAAAGGGAACA---AAGTTT------------------------------------TTTGTGCAA---CTCGTTACCCTCGATATTGGCATGATTGTTTGTGCTTTTATCGCAGAG---------ACT------------------TCG---------------------------------------------------------CCA---ATAGGA---------TCA---------------------------CAAGAATGG------------------TGGGGATTC---TTTATCGTAGCGTGTGTGCTTGAATTGTTGATTGTGGCAATTCTC---------------TAC------ACA---GGTCTCGGCTCTGCTATCAATGCAGCA---------------CCAGCACCGATT---GCT---AAA---TCA---CTG---AAT---ACCATG---CGACTATTCATTCTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRM---G--EKGT-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-IG---S---------QEW------WGF-FIVACVLELLIVAIL-----Y--T-GLGSAINAA-----PAPI-A-K-S-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927484 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_ce406e948774e5d1c6e5118df832e720 gb|KJ927484| PRGD_OTU010_ce406e948774e5d1c6e5118df832e720, putative proteorhodopsin gene, partial cds. PRGD_OTU010_ce406e948774e5d1c6e5118df832e720, putative proteorhodopsin gene, partial cds. KJ927484 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Bering strait marine 67.49 -168.12 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683) CTCTTCACAACGCCGTTGATGCTCATCAAGTTTCCACTTCTTCTTCGAATGGGAGAAAAGGGAACAAAGTTTTTTGTGCAACTCGTTACCCTCGATATTGGCATGATTGTTTGTGCTTTTATCGCAGAGACTTCGCCAATAGGATCACAAGAATGGTGGGGATTCTTTATCGTAGCATGTGTGCTTGAATTGTTGATTGTGGCAATTCTCTACACAGGTCTCGGCTCTGCTATCAATGCAGCACCAGCACCGATTGCTAAATCACTGAATACCATGCGACTATTTATCCTGATT LFTTPLMLIKFPLLLRMGEKGTKFFVQLVTLDIGMIVCAFIAETSPIGSQEWWGFFIVACVLELLIVAILYTGLGSAINAAPAPIAKSLNTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCACAACGCCGTTGATGCTCATCAAGTTTCCACTTCTTCTTCGAATG---------GGA------GAAAAGGGAACA---AAGTTT------------------------------------TTTGTGCAA---CTCGTTACCCTCGATATTGGCATGATTGTTTGTGCTTTTATCGCAGAG---------ACT------------------TCG---------------------------------------------------------CCA---ATAGGA---------TCA---------------------------CAAGAATGG------------------TGGGGATTC---TTTATCGTAGCATGTGTGCTTGAATTGTTGATTGTGGCAATTCTC---------------TAC------ACA---GGTCTCGGCTCTGCTATCAATGCAGCA---------------CCAGCACCGATT---GCT---AAA---TCA---CTG---AAT---ACCATG---CGACTATTTATCCTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRM---G--EKGT-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-IG---S---------QEW------WGF-FIVACVLELLIVAIL-----Y--T-GLGSAINAA-----PAPI-A-K-S-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927491 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_dd1c4d489a38adbb9d426ee433d15653 gb|KJ927491| PRGD_OTU010_dd1c4d489a38adbb9d426ee433d15653, putative proteorhodopsin gene, partial cds. PRGD_OTU010_dd1c4d489a38adbb9d426ee433d15653, putative proteorhodopsin gene, partial cds. KJ927491 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683) CTCTTCACAACGCCGTTGATGCTCATCAAGTTTCCACTTCTTCTTCGAATGGGAGAAAAGGGAACAAAGTTTTTTGTGCAACTCGTTACCCTCGATATTGGCATGATTGTTTGTGCTTTTATCGCAGAGACTTCGCCAATAGGATCGAATGAGTGGTGGGGATTCTTTATCGTAGCATGTGTGCTTGAATTGTTGATTGTGGCAATTCTCTACACAGGTCTCGGCTCTGCTATCAATGCAGCACCAGCACCGATTGCTAAATCACTGAATACGATGCGGCTATTCATTCTGATT LFTTPLMLIKFPLLLRMGEKGTKFFVQLVTLDIGMIVCAFIAETSPIGSNEWWGFFIVACVLELLIVAILYTGLGSAINAAPAPIAKSLNTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCACAACGCCGTTGATGCTCATCAAGTTTCCACTTCTTCTTCGAATG---------GGA------GAAAAGGGAACA---AAGTTT------------------------------------TTTGTGCAA---CTCGTTACCCTCGATATTGGCATGATTGTTTGTGCTTTTATCGCAGAG---------ACT------------------TCG---------------------------------------------------------CCA---ATAGGA---------TCG---------------------------AATGAGTGG------------------TGGGGATTC---TTTATCGTAGCATGTGTGCTTGAATTGTTGATTGTGGCAATTCTC---------------TAC------ACA---GGTCTCGGCTCTGCTATCAATGCAGCA---------------CCAGCACCGATT---GCT---AAA---TCA---CTG---AAT---ACGATG---CGGCTATTCATTCTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRM---G--EKGT-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-IG---S---------NEW------WGF-FIVACVLELLIVAIL-----Y--T-GLGSAINAA-----PAPI-A-K-S-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927473 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_940678555f177b756b3b6d6e4426d1db gb|KJ927473| PRGD_OTU010_940678555f177b756b3b6d6e4426d1db, putative proteorhodopsin gene, partial cds. PRGD_OTU010_940678555f177b756b3b6d6e4426d1db, putative proteorhodopsin gene, partial cds. KJ927473 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 01-juil-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683) CTCTTCACAACCCCGTTGATGCTCATCAAGTTTCCACTACTTCTTCGAATGGGAGAAAAAGGGACAAAGTTTTTTGTTCAACTCGTAACCCTTGATATTGGCATGATTGTTTGTGCTTTTATCGCAGAAACTTCACCAATTGGATCAAATGAGTGGTGGGGATTCTTTATCGTAGCATGTGTGCTTGAATTGTTGATTGTGGCAATTCTCTATACAGGTCTCGGCTCTGCTATCAAGGCAGCACCAGCACCGATTGCTAAATCACTTGATACGATGCGACTATTCATCCTAATT LFTTPLMLIKFPLLLRMGEKGTKFFVQLVTLDIGMIVCAFIAETSPIGSNEWWGFFIVACVLELLIVAILYTGLGSAIKAAPAPIAKSLDTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCACAACCCCGTTGATGCTCATCAAGTTTCCACTACTTCTTCGAATG---------GGA------GAAAAAGGGACA---AAGTTT------------------------------------TTTGTTCAA---CTCGTAACCCTTGATATTGGCATGATTGTTTGTGCTTTTATCGCAGAA---------ACT------------------TCA---------------------------------------------------------CCA---ATTGGA---------TCA---------------------------AATGAGTGG------------------TGGGGATTC---TTTATCGTAGCATGTGTGCTTGAATTGTTGATTGTGGCAATTCTC---------------TAT------ACA---GGTCTCGGCTCTGCTATCAAGGCAGCA---------------CCAGCACCGATT---GCT---AAA---TCA---CTT---GAT---ACGATG---CGACTATTCATCCTAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRM---G--EKGT-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-IG---S---------NEW------WGF-FIVACVLELLIVAIL-----Y--T-GLGSAIKAA-----PAPI-A-K-S-L-D-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927483 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_ccdf1a048c6b600d127c45a7fc52babe gb|KJ927483| PRGD_OTU010_ccdf1a048c6b600d127c45a7fc52babe, putative proteorhodopsin gene, partial cds. PRGD_OTU010_ccdf1a048c6b600d127c45a7fc52babe, putative proteorhodopsin gene, partial cds. KJ927483 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097) CTCTTCACAACCCCGTTGATGCTCATCAAGTTTCCACTACTGCTTCGAATGGGAGAAAAAGGGACAAAGTTTTTTGTTCAACTCGTAACCCTTGATATTGGCATGATTGTTTGTGCTTTTATCGCAGAAACTTCACCAATTGGATCAAATGAGTGGTGGGGATTCTTTATCGTAGCATGTGTGCTTGAATTGTTGATTGTGGCAATTCTCTACACAGGTCTCGGCTCTGCTATCAAGGCAGCACCAGCACCGATTGCTAAATCACTTGATACGATGCGACTATTTATCCTGATT LFTTPLMLIKFPLLLRMGEKGTKFFVQLVTLDIGMIVCAFIAETSPIGSNEWWGFFIVACVLELLIVAILYTGLGSAIKAAPAPIAKSLDTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCACAACCCCGTTGATGCTCATCAAGTTTCCACTACTGCTTCGAATG---------GGA------GAAAAAGGGACA---AAGTTT------------------------------------TTTGTTCAA---CTCGTAACCCTTGATATTGGCATGATTGTTTGTGCTTTTATCGCAGAA---------ACT------------------TCA---------------------------------------------------------CCA---ATTGGA---------TCA---------------------------AATGAGTGG------------------TGGGGATTC---TTTATCGTAGCATGTGTGCTTGAATTGTTGATTGTGGCAATTCTC---------------TAC------ACA---GGTCTCGGCTCTGCTATCAAGGCAGCA---------------CCAGCACCGATT---GCT---AAA---TCA---CTT---GAT---ACGATG---CGACTATTTATCCTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRM---G--EKGT-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-IG---S---------NEW------WGF-FIVACVLELLIVAIL-----Y--T-GLGSAIKAA-----PAPI-A-K-S-L-D-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927448 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_22f5d8ea33f3980e71dc0b8de7c6c490 gb|KJ927448| PRGD_OTU010_22f5d8ea33f3980e71dc0b8de7c6c490, putative proteorhodopsin gene, partial cds. PRGD_OTU010_22f5d8ea33f3980e71dc0b8de7c6c490, putative proteorhodopsin gene, partial cds. KJ927448 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), English Channel (48.7717, -3.9683) CTCTTCACAACGCCGTTGATGCTCATCAAGTTTCCGCTGCTTCTTCGAATGGGAGAAAAGGGAACAAAGTTTTTTGTTCAACTCGTAACCCTCGATATTGGCATGATTGTTTGTGCTTTTATTGCAGAGACTTCGCCAATAGGATCGAATGAGTGGTGGGGCTTTTTCATCGTAGCATGTGTTCTGGAATTACTAATAGTGGCAATTCTCTACACAGGTCTTGGCTCTGCTATCAAGGCAGCACCAGCACCGATTGCTAAATCACTCGATACGATGCGGCTATTCATTCTGATC LFTTPLMLIKFPLLLRMGEKGTKFFVQLVTLDIGMIVCAFIAETSPIGSNEWWGFFIVACVLELLIVAILYTGLGSAIKAAPAPIAKSLDTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCACAACGCCGTTGATGCTCATCAAGTTTCCGCTGCTTCTTCGAATG---------GGA------GAAAAGGGAACA---AAGTTT------------------------------------TTTGTTCAA---CTCGTAACCCTCGATATTGGCATGATTGTTTGTGCTTTTATTGCAGAG---------ACT------------------TCG---------------------------------------------------------CCA---ATAGGA---------TCG---------------------------AATGAGTGG------------------TGGGGCTTT---TTCATCGTAGCATGTGTTCTGGAATTACTAATAGTGGCAATTCTC---------------TAC------ACA---GGTCTTGGCTCTGCTATCAAGGCAGCA---------------CCAGCACCGATT---GCT---AAA---TCA---CTC---GAT---ACGATG---CGGCTATTCATTCTGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRM---G--EKGT-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-IG---S---------NEW------WGF-FIVACVLELLIVAIL-----Y--T-GLGSAIKAA-----PAPI-A-K-S-L-D-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927458 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_5b0307ef44b4ea602fdc3ae4bf97ff1f gb|KJ927458| PRGD_OTU010_5b0307ef44b4ea602fdc3ae4bf97ff1f, putative proteorhodopsin gene, partial cds. PRGD_OTU010_5b0307ef44b4ea602fdc3ae4bf97ff1f, putative proteorhodopsin gene, partial cds. KJ927458 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCTTCACAACGCCGTTGATGCTCATCAAGTTTCCGCTGCTTCTTCGAATGGGAGAAAAGGGAACAAAGTTTTTTGTGCAACTCGTAACCCTCGATATTGGCATGATTGTTTGTGCTTTTATTGCAGAGACTTCGCCAATAGGATCGAATGAGTGGTGGGGCTTTTTCATCGTAGCATGTGTTCTGGAATTACTAATAGTGGCAATTCTCTACACAGGTCTTGGCTCTGCTATCAAGGCAGCACCAGCACCGATTGCTAAATCTCTCGATACGATGCGGCTATTCATTCTGATC LFTTPLMLIKFPLLLRMGEKGTKFFVQLVTLDIGMIVCAFIAETSPIGSNEWWGFFIVACVLELLIVAILYTGLGSAIKAAPAPIAKSLDTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCACAACGCCGTTGATGCTCATCAAGTTTCCGCTGCTTCTTCGAATG---------GGA------GAAAAGGGAACA---AAGTTT------------------------------------TTTGTGCAA---CTCGTAACCCTCGATATTGGCATGATTGTTTGTGCTTTTATTGCAGAG---------ACT------------------TCG---------------------------------------------------------CCA---ATAGGA---------TCG---------------------------AATGAGTGG------------------TGGGGCTTT---TTCATCGTAGCATGTGTTCTGGAATTACTAATAGTGGCAATTCTC---------------TAC------ACA---GGTCTTGGCTCTGCTATCAAGGCAGCA---------------CCAGCACCGATT---GCT---AAA---TCT---CTC---GAT---ACGATG---CGGCTATTCATTCTGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRM---G--EKGT-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-IG---S---------NEW------WGF-FIVACVLELLIVAIL-----Y--T-GLGSAIKAA-----PAPI-A-K-S-L-D-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927485 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_cf77645926a9ab4f7edc365791d9441a gb|KJ927485| PRGD_OTU010_cf77645926a9ab4f7edc365791d9441a, putative proteorhodopsin gene, partial cds. PRGD_OTU010_cf77645926a9ab4f7edc365791d9441a, putative proteorhodopsin gene, partial cds. KJ927485 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683) CTCTTCACAACGCCGTTGATGCTCATCAAGTTTCCGCTGCTTCTTCGAATGGGAGAAAAGGGAACAAAGTTTTTTGTGCAACTCGTAACCCTCGATATTGGCATGATTGTTTGTGCTTTTATCGCAGAGACTTCGCCAATAGGATCGAATGAATGGTGGGGATTTTTCATCGTAGCATGTGTTCTGGAATTACTTATCGTGGCAATTCTCTACACAGGTCTTGGCTCTGCTATCAAGGCGGCACCGGCACCAATTGCTAAATCACTCGATACGATGCGGCTATTCATTCTGATT LFTTPLMLIKFPLLLRMGEKGTKFFVQLVTLDIGMIVCAFIAETSPIGSNEWWGFFIVACVLELLIVAILYTGLGSAIKAAPAPIAKSLDTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCACAACGCCGTTGATGCTCATCAAGTTTCCGCTGCTTCTTCGAATG---------GGA------GAAAAGGGAACA---AAGTTT------------------------------------TTTGTGCAA---CTCGTAACCCTCGATATTGGCATGATTGTTTGTGCTTTTATCGCAGAG---------ACT------------------TCG---------------------------------------------------------CCA---ATAGGA---------TCG---------------------------AATGAATGG------------------TGGGGATTT---TTCATCGTAGCATGTGTTCTGGAATTACTTATCGTGGCAATTCTC---------------TAC------ACA---GGTCTTGGCTCTGCTATCAAGGCGGCA---------------CCGGCACCAATT---GCT---AAA---TCA---CTC---GAT---ACGATG---CGGCTATTCATTCTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRM---G--EKGT-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-IG---S---------NEW------WGF-FIVACVLELLIVAIL-----Y--T-GLGSAIKAA-----PAPI-A-K-S-L-D-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927453 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_3e54feabfe2de5771fb89417cf10f4a7 gb|KJ927453| PRGD_OTU010_3e54feabfe2de5771fb89417cf10f4a7, putative proteorhodopsin gene, partial cds. PRGD_OTU010_3e54feabfe2de5771fb89417cf10f4a7, putative proteorhodopsin gene, partial cds. KJ927453 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683) CTCTTCACAACACCGTTGATGCTCATCAAGTTTCCGTTACTTCTTCGACTTGGAGATAAGGGAACAAAGTTTTTTGTCCAACTCGTCACTCTTGATATTGGCATGATTGTGTGTGCTTTTATCGCAGAGACTTCACCGATAGGATCAAATGAATGGTGGGGATTTTTCATCGTAGCCTGTGTTCTTGAATTGCTGATTGTGGCAATTCTTTACACTGGTCTTGGTTCTGCGATAAACGCGGCACCGGCACCAATTGCTAAATCACTCAATACGATGCGGCTGTTCATTTTGATT LFTTPLMLIKFPLLLRLGDKGTKFFVQLVTLDIGMIVCAFIAETSPIGSNEWWGFFIVACVLELLIVAILYTGLGSAINAAPAPIAKSLNTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCACAACACCGTTGATGCTCATCAAGTTTCCGTTACTTCTTCGACTT---------GGA------GATAAGGGAACA---AAGTTT------------------------------------TTTGTCCAA---CTCGTCACTCTTGATATTGGCATGATTGTGTGTGCTTTTATCGCAGAG---------ACT------------------TCA---------------------------------------------------------CCG---ATAGGA---------TCA---------------------------AATGAATGG------------------TGGGGATTT---TTCATCGTAGCCTGTGTTCTTGAATTGCTGATTGTGGCAATTCTT---------------TAC------ACT---GGTCTTGGTTCTGCGATAAACGCGGCA---------------CCGGCACCAATT---GCT---AAA---TCA---CTC---AAT---ACGATG---CGGCTGTTCATTTTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGT-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-IG---S---------NEW------WGF-FIVACVLELLIVAIL-----Y--T-GLGSAINAA-----PAPI-A-K-S-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927446 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_1573eefa7f154fb37a906785e65608d9 gb|KJ927446| PRGD_OTU010_1573eefa7f154fb37a906785e65608d9, putative proteorhodopsin gene, partial cds. PRGD_OTU010_1573eefa7f154fb37a906785e65608d9, putative proteorhodopsin gene, partial cds. KJ927446 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683) CTCTTCACAACGCCGTTAATGCTCATCAAGTTTCCGTTACTTCTACGACTTGGAGACAAGGGGACAAAGTTTTTTGTCCAACTCGTCACTCTCGACATTGGCATGATTGTTTGTGCTTTTATCGCAGAGACTTCACCCATAGGATCAAACGAGTGGTGGGGATTCTTTATTGTCGCCTGTGTTCTTGAATTACTGATTGTGGCAATTCTTTACACTGGCCTTGCTTCTGCTATCAACGCGGCACCGGCACCAATTGCCAAGTCGCTCAACACGATGCGGCTGTTCATTTTGATT LFTTPLMLIKFPLLLRLGDKGTKFFVQLVTLDIGMIVCAFIAETSPIGSNEWWGFFIVACVLELLIVAILYTGLASAINAAPAPIAKSLNTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCACAACGCCGTTAATGCTCATCAAGTTTCCGTTACTTCTACGACTT---------GGA------GACAAGGGGACA---AAGTTT------------------------------------TTTGTCCAA---CTCGTCACTCTCGACATTGGCATGATTGTTTGTGCTTTTATCGCAGAG---------ACT------------------TCA---------------------------------------------------------CCC---ATAGGA---------TCA---------------------------AACGAGTGG------------------TGGGGATTC---TTTATTGTCGCCTGTGTTCTTGAATTACTGATTGTGGCAATTCTT---------------TAC------ACT---GGCCTTGCTTCTGCTATCAACGCGGCA---------------CCGGCACCAATT---GCC---AAG---TCG---CTC---AAC---ACGATG---CGGCTGTTCATTTTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGT-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-IG---S---------NEW------WGF-FIVACVLELLIVAIL-----Y--T-GLASAINAA-----PAPI-A-K-S-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927443 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_0890b679c4ed91abcae1ff07f89c450b gb|KJ927443| PRGD_OTU010_0890b679c4ed91abcae1ff07f89c450b, putative proteorhodopsin gene, partial cds. PRGD_OTU010_0890b679c4ed91abcae1ff07f89c450b, putative proteorhodopsin gene, partial cds. KJ927443 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTTTTTACAACACCGTTGATGCTCATCAAGTTTCCGTTACTACTTCGACTTGGAGACAAGGGAACAAAGTTTTTTGTCCAACTCGTCACTCTCGACATTGGCATGATTGTCTGTGCTTTTATTGCAGAGACCTCACCTATAGGCTCAAATGAGTGGTGGGGATTTTTCATTGTAGCCTGTGTTCTAGAATTATTGATTGTGGCAATTCTTTACACTGGCCTTGGCTCTGCTATCAACGCGGCACCTGCACCAATTGCTAAATCACTCAACACGATGCGGCTGTTCATTTTGATT LFTTPLMLIKFPLLLRLGDKGTKFFVQLVTLDIGMIVCAFIAETSPIGSNEWWGFFIVACVLELLIVAILYTGLGSAINAAPAPIAKSLNTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTTACAACACCGTTGATGCTCATCAAGTTTCCGTTACTACTTCGACTT---------GGA------GACAAGGGAACA---AAGTTT------------------------------------TTTGTCCAA---CTCGTCACTCTCGACATTGGCATGATTGTCTGTGCTTTTATTGCAGAG---------ACC------------------TCA---------------------------------------------------------CCT---ATAGGC---------TCA---------------------------AATGAGTGG------------------TGGGGATTT---TTCATTGTAGCCTGTGTTCTAGAATTATTGATTGTGGCAATTCTT---------------TAC------ACT---GGCCTTGGCTCTGCTATCAACGCGGCA---------------CCTGCACCAATT---GCT---AAA---TCA---CTC---AAC---ACGATG---CGGCTGTTCATTTTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGT-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-IG---S---------NEW------WGF-FIVACVLELLIVAIL-----Y--T-GLGSAINAA-----PAPI-A-K-S-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ927470 [I-Firmicutes-Exiguobacterium] PRGD_OTU010_86d77d8e73ca6c1782e269f10eb852d0 gb|KJ927470| PRGD_OTU010_86d77d8e73ca6c1782e269f10eb852d0, putative proteorhodopsin gene, partial cds. PRGD_OTU010_86d77d8e73ca6c1782e269f10eb852d0, putative proteorhodopsin gene, partial cds. KJ927470 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster Exiguobacterium rhodopsin (EsR) proton pump na ; K108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 01-juil-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTTGGTGACAAAGGTAAAAAGTTTTTCGTACAGCTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAGACTTCACCAGTTGCCTCAAACGAGTGGTGGGGATTTTTCATTGTAGCCTGTGTTCTAGAATTATTGATTGTGGCAATTCTTTACACTGGCCTTGGCTCTGCTATCAACGCGGCACCTGCACCAATTGCTAAATCACTCAACACGATGCGGCTGTTCATTTTGATT LFTTPLMLIKFPLLLRLGDKGKKFFVQLVTLDIGMIVCAFIAETSPVASNEWWGFFIVACVLELLIVAILYTGLGSAINAAPAPIAKSLNTMRLFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTACAACGCCCTTGATGCTTATCAAGTTCCCTCTCTTGCTGCGGCTT---------GGT------GACAAAGGTAAA---AAGTTT------------------------------------TTCGTACAG---CTTGTAACGCTTGACATAGGCATGATTGTTTGTGCGTTTATTGCAGAG---------ACT------------------TCA---------------------------------------------------------CCA---GTTGCC---------TCA---------------------------AACGAGTGG------------------TGGGGATTT---TTCATTGTAGCCTGTGTTCTAGAATTATTGATTGTGGCAATTCTT---------------TAC------ACT---GGCCTTGGCTCTGCTATCAACGCGGCA---------------CCTGCACCAATT---GCT---AAA---TCA---CTC---AAC---ACGATG---CGGCTGTTCATTTTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFTTPLMLIKFPLLLRL---G--DKGK-KF------------FVQ-LVTLDIGMIVCAFIAE---T------S-------------------P-VA---S---------NEW------WGF-FIVACVLELLIVAIL-----Y--T-GLGSAINAA-----PAPI-A-K-S-L-N-TM-RLFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ929872 [I-Firmicutes-Exiguobacterium] PRGD_OTU323_otuREP_598478a74f8d8618f51778bfda6ee6fc gb|KJ929872| PRGD_OTU323_otuREP_598478a74f8d8618f51778bfda6ee6fc, putative proteorhodopsin gene, partial cds. PRGD_OTU323_otuREP_598478a74f8d8618f51778bfda6ee6fc, putative proteorhodopsin gene, partial cds. KJ929872 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTCATTACCGTGCCGTTGATGGTTCTTGAATTCCCGTTGTTGCTCGCCCTCGGTCGTCGAGCCAACGGCATGTTCTACTCCCTTGGTGGTATTTCGCTTGCCATGTTGATTACAGCTTGGATTGCCGAAGTCAGCCCAATCAGCTCGGGTCAATGGTGGGGCTTCTACCTCGTCTCCTGCGCTTGCTGGGTCGTCATGGTCAGCATGCTGTACGGACAAGTCACCAAGGCAGCGTCGCACCTGCCCGCTGAGTTCCAAGACAACCTGAAGTGCATGAAGACCTTCATCGCTGTG LITVPLMVLEFPLLLALGRRANGMFYSLGGISLAMLITAWIAEVSPISSGQWWGFYLVSCACWVVMVSMLYGQVTKAASHLPAEFQDNLKCMKTFIAV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATTACCGTGCCGTTGATGGTTCTTGAATTCCCGTTGTTGCTCGCCCTC---------GGT------CGTCGAGCCAAC---GGCATG------------------------------------TTCTACTCC---CTTGGTGGTATTTCGCTTGCCATGTTGATTACAGCTTGGATTGCCGAA---------GTC------------------AGC---------------------------------------------------------CCA---ATCAGC---------TCG---------------------------GGTCAATGG------------------TGGGGCTTC---TACCTCGTCTCCTGCGCTTGCTGGGTCGTCATGGTCAGCATGCTG---------------TAC------GGA---CAAGTCACCAAGGCAGCGTCGCACCTG---------------CCCGCTGAGTTC---CAA---GAC---AAC---CTG---AAG---TGCATG---AAGACCTTCATCGCTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLMVLEFPLLLAL---G--RRAN-GM------------FYS-LGGISLAMLITAWIAE---V------S-------------------P-IS---S---------GQW------WGF-YLVSCACWVVMVSML-----Y--G-QVTKAASHL-----PAEF-Q-D-N-L-K-CM-KTFIAV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ929906 [I-Firmicutes-Exiguobacterium] PRGD_OTU357_otuREP_da7dbb5933e258e0d66e0e716ffa3cbe gb|KJ929906| PRGD_OTU357_otuREP_da7dbb5933e258e0d66e0e716ffa3cbe, putative proteorhodopsin gene, partial cds. PRGD_OTU357_otuREP_da7dbb5933e258e0d66e0e716ffa3cbe, putative proteorhodopsin gene, partial cds. KJ929906 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCATCACGGTCCCGCTGATGGTGCTCGAGTTCCCGTTGCTGCTCAACCTCGGCAAGAAGGGCAAGCCCTTGTTCCTCGGACTCGGCGTGCTCTCGCTGGTCATGCTCGTCACCGCGTGGGTCGCGGAAACCAGCCCCCTCGGCGGTGGCTCCTGGTGGGGCTTCTACATCGTCAGCTGCCTCGCATGGGTGGGAATCGTCGGCATGCTCTACGGCTCGGTCACCCGTGCCTCCAAGCACCTGCCCGAGGATTTCCAGGGTCACCTCGGCACGATGAAGGCGTTCATCCTCATC LITVPLMVLEFPLLLNLGKKGKPLFLGLGVLSLVMLVTAWVAETSPLGGGSWWGFYIVSCLAWVGIVGMLYGSVTRASKHLPEDFQGHLGTMKAFILI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCACGGTCCCGCTGATGGTGCTCGAGTTCCCGTTGCTGCTCAACCTC---------GGC------AAGAAGGGCAAG---CCCTTG------------------------------------TTCCTCGGA---CTCGGCGTGCTCTCGCTGGTCATGCTCGTCACCGCGTGGGTCGCGGAA---------ACC------------------AGC---------------------------------------------------------CCC---CTCGGC---------GGT---------------------------GGCTCCTGG------------------TGGGGCTTC---TACATCGTCAGCTGCCTCGCATGGGTGGGAATCGTCGGCATGCTC---------------TAC------GGC---TCGGTCACCCGTGCCTCCAAGCACCTG---------------CCCGAGGATTTC---CAG---GGT---CAC---CTC---GGC---ACGATG---AAGGCGTTCATCCTCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLMVLEFPLLLNL---G--KKGK-PL------------FLG-LGVLSLVMLVTAWVAE---T------S-------------------P-LG---G---------GSW------WGF-YIVSCLAWVGIVGML-----Y--G-SVTRASKHL-----PEDF-Q-G-H-L-G-TM-KAFILI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ929477 [I-Firmicutes-Exiguobacterium] PRGD_OTU133_otuREP_082e6c9aaf01466218286888b3f15831 gb|KJ929477| PRGD_OTU133_otuREP_082e6c9aaf01466218286888b3f15831, putative proteorhodopsin gene, partial cds. PRGD_OTU133_otuREP_082e6c9aaf01466218286888b3f15831, putative proteorhodopsin gene, partial cds. KJ929477 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683) CTGATCACCACCCCGCTATTGCTGGTGGAGTTCGGTCTCATTGTTGCGATCGCTGGAGCTGCTACCAAGGGCTTCGTTACCCGCATCGTCATTGCTGACATCATCATGATCGCCACGGGTTACCTTGGCGAGATTGGCATGGAAGGCGACATGACCACCGTGCTGTGGTTCGTTATCTCCTCCCTCGCATGGCTCTACATCGTCTACGCAGTGTTCCAGATCAAGATTGCTGGAATGCCAGACTATGCAGCCAGCGCAGTCAAGGTCATGCGCCGCTTTGTGATGCTC LITTPLLLVEFGLIVAIAGAATKGFVTRIVIADIIMIATGYLGEIGMEGDMTTVLWFVISSLAWLYIVYAVFQIKIAGMPDYAASAVKVMRRFVML ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCACCCCGCTATTGCTGGTGGAGTTCGGTCTCATTGTTGCGATC---------GCT---GGAGCTGCTACCAAG---GGCTTC------------------------------------GTTACCCGC---ATCGTCATTGCTGACATCATCATGATCGCCACGGGTTACCTTGGCGAG---------ATT------------------GGC---------------------------------------------------------ATG---GAAGGC---------GAC---------------------------ATGACCACC------------------GTGCTGTGG---TTCGTTATCTCCTCCCTCGCATGGCTCTACATCGTCTACGCAGTG---------------TTC------CAG------------ATCAAGATTGCTGGAATG---------------CCAGACTATGCA---GCC---AGC---GCA---GTC---AAG---GTCATG---CGCCGCTTTGTGATGCTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITTPLLLVEFGLIVAI---A-GAATK-GF------------VTR-IVIADIIMIATGYLGE---I------G-------------------M-EG---D---------MTT------VLW-FVISSLAWLYIVYAV-----F--Q----IKIAGM-----PDYA-A-S-A-V-K-VM-RRFVML-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ929480 [I-Firmicutes-Exiguobacterium] PRGD_OTU133_f9f16bf755a54c21a6047e7f74bb2e86 gb|KJ929480| PRGD_OTU133_f9f16bf755a54c21a6047e7f74bb2e86, putative proteorhodopsin gene, partial cds. PRGD_OTU133_f9f16bf755a54c21a6047e7f74bb2e86, putative proteorhodopsin gene, partial cds. KJ929480 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACCACCCCGCTATTGCTGGTGGAGTTCGGCCTCATTGTTGCGATCGCTGGAGCTGCTACCAAGGGCTTCGTTACCCGCATCGTCATTGCTGACATCATCATGATCGCCACGGGTTACCTTGGCGAGATTGGCATGCAAGGCGACATGACCACCGTCTTGTGGTTCGTTATCTCCTCCCTCGCATGGCTCTACATCGTCTACGCAGTGTTCCAGATCAAGATTGCTGGAATGCCGGACTATGCAGCCAGCGCAGTCAAGGTCATGCGCCGCTTTGTGATGCTC LITTPLLLVEFGLIVAIAGAATKGFVTRIVIADIIMIATGYLGEIGMQGDMTTVLWFVISSLAWLYIVYAVFQIKIAGMPDYAASAVKVMRRFVML ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCACCCCGCTATTGCTGGTGGAGTTCGGCCTCATTGTTGCGATC---------GCT---GGAGCTGCTACCAAG---GGCTTC------------------------------------GTTACCCGC---ATCGTCATTGCTGACATCATCATGATCGCCACGGGTTACCTTGGCGAG---------ATT------------------GGC---------------------------------------------------------ATG---CAAGGC---------GAC---------------------------ATGACCACC------------------GTCTTGTGG---TTCGTTATCTCCTCCCTCGCATGGCTCTACATCGTCTACGCAGTG---------------TTC------CAG------------ATCAAGATTGCTGGAATG---------------CCGGACTATGCA---GCC---AGC---GCA---GTC---AAG---GTCATG---CGCCGCTTTGTGATGCTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITTPLLLVEFGLIVAI---A-GAATK-GF------------VTR-IVIADIIMIATGYLGE---I------G-------------------M-QG---D---------MTT------VLW-FVISSLAWLYIVYAV-----F--Q----IKIAGM-----PDYA-A-S-A-V-K-VM-RRFVML-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ929481 [I-Firmicutes-Exiguobacterium] PRGD_OTU133_ffce1a23b2ca88d34178b8a9a53fc5a8 gb|KJ929481| PRGD_OTU133_ffce1a23b2ca88d34178b8a9a53fc5a8, putative proteorhodopsin gene, partial cds. PRGD_OTU133_ffce1a23b2ca88d34178b8a9a53fc5a8, putative proteorhodopsin gene, partial cds. KJ929481 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185), Indian Ocean (-35.05, 23.73) TTGATCACCACCCCGCTGTTGCTGGTGGAGTTCGGTCTCATTGTTGCGATCGCTGGAGCTGCTACCAAGGGCTTCGTTACCCGCATCGTCATTGCTGACATCATCATGATCGCCACGGGTTACCTCGGCGAGATTGGCATGGAAGGCGACATGACCACCGTCTTGTGGTTCGTTATCTCCTCCCTCGCATGGCTCTACATCGTCTACGCAGTGTTCCAGATCAAGATTGCTGGAATGCCAGACTATGCAGCCAGCGCAGTCAAGGTCATGCGCCGCTTTGTGATGCTC LITTPLLLVEFGLIVAIAGAATKGFVTRIVIADIIMIATGYLGEIGMEGDMTTVLWFVISSLAWLYIVYAVFQIKIAGMPDYAASAVKVMRRFVML ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACCACCCCGCTGTTGCTGGTGGAGTTCGGTCTCATTGTTGCGATC---------GCT---GGAGCTGCTACCAAG---GGCTTC------------------------------------GTTACCCGC---ATCGTCATTGCTGACATCATCATGATCGCCACGGGTTACCTCGGCGAG---------ATT------------------GGC---------------------------------------------------------ATG---GAAGGC---------GAC---------------------------ATGACCACC------------------GTCTTGTGG---TTCGTTATCTCCTCCCTCGCATGGCTCTACATCGTCTACGCAGTG---------------TTC------CAG------------ATCAAGATTGCTGGAATG---------------CCAGACTATGCA---GCC---AGC---GCA---GTC---AAG---GTCATG---CGCCGCTTTGTGATGCTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITTPLLLVEFGLIVAI---A-GAATK-GF------------VTR-IVIADIIMIATGYLGE---I------G-------------------M-EG---D---------MTT------VLW-FVISSLAWLYIVYAV-----F--Q----IKIAGM-----PDYA-A-S-A-V-K-VM-RRFVML-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ929479 [I-Firmicutes-Exiguobacterium] PRGD_OTU133_9f472fc3def0391f93bd0b01d1e57300 gb|KJ929479| PRGD_OTU133_9f472fc3def0391f93bd0b01d1e57300, putative proteorhodopsin gene, partial cds. PRGD_OTU133_9f472fc3def0391f93bd0b01d1e57300, putative proteorhodopsin gene, partial cds. KJ929479 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Bering strait marine 67.49 -168.12 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12) CTGATCACCACCCCGCTGTTGCTGGTGGAGTTCGGTCTCATTGTTGCGATTGCTGGAGCTGCTACCAAGGGCTTCGTTACCCGCATCGTCATTGCTGACATCATCATGATCGCCACGGGTTACCTCGGCGAGATTGGCATGGAAGGCGACATGTCCACCATCGTGTGGTTCGTTATCTCCTCCCTCGCATGGCTCTACATCGTCTACGCAGTGTTCCAGGTCAAGATCGCTGGAATGCCAGACTATGCAGCCAGTGCAGTCAAGATCATGCGTCGCTTTGTGATGCTC LITTPLLLVEFGLIVAIAGAATKGFVTRIVIADIIMIATGYLGEIGMEGDMSTIVWFVISSLAWLYIVYAVFQVKIAGMPDYAASAVKIMRRFVML ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCACCCCGCTGTTGCTGGTGGAGTTCGGTCTCATTGTTGCGATT---------GCT---GGAGCTGCTACCAAG---GGCTTC------------------------------------GTTACCCGC---ATCGTCATTGCTGACATCATCATGATCGCCACGGGTTACCTCGGCGAG---------ATT------------------GGC---------------------------------------------------------ATG---GAAGGC---------GAC---------------------------ATGTCCACC------------------ATCGTGTGG---TTCGTTATCTCCTCCCTCGCATGGCTCTACATCGTCTACGCAGTG---------------TTC------CAG------------GTCAAGATCGCTGGAATG---------------CCAGACTATGCA---GCC---AGT---GCA---GTC---AAG---ATCATG---CGTCGCTTTGTGATGCTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITTPLLLVEFGLIVAI---A-GAATK-GF------------VTR-IVIADIIMIATGYLGE---I------G-------------------M-EG---D---------MST------IVW-FVISSLAWLYIVYAV-----F--Q----VKIAGM-----PDYA-A-S-A-V-K-IM-RRFVML-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ929696 [I-Firmicutes-Exiguobacterium] PRGD_OTU200_otuREP_17a2f5330a6d365ee1146f5fe3a0109d gb|KJ929696| PRGD_OTU200_otuREP_17a2f5330a6d365ee1146f5fe3a0109d, putative proteorhodopsin gene, partial cds. PRGD_OTU200_otuREP_17a2f5330a6d365ee1146f5fe3a0109d, putative proteorhodopsin gene, partial cds. KJ929696 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-14.48, 113.45) TTGCTTACCACCCCACTGCTCTTGGTGGAGTTCGGTCTGATTGTCGCAATTGCTGGTGCTGCTAGCAAGGGCTTCGTGCGCCGCATTGTTATTGCGGACGTCATCATGATCGCCACCGGTTACCTCGGTGAGGTTGCTACGGAAGGAACCGCCGCCGCGTGGATCTTCTTCCTCATCTCCAGCGCGGCCTGGGTCTACATCGTCTGGGCAGTGTTCCAGATCAAGCTCGATGGCATGCCCGACTACGCAGCCAGCGCAGTGCGTATCATGCGACGCTTCGTGATGCTC LLTTPLLLVEFGLIVAIAGAASKGFVRRIVIADVIMIATGYLGEVATEGTAAAWIFFLISSAAWVYIVWAVFQIKLDGMPDYAASAVRIMRRFVML ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTTACCACCCCACTGCTCTTGGTGGAGTTCGGTCTGATTGTCGCAATT---------GCT---GGTGCTGCTAGCAAG---GGCTTC------------------------------------GTGCGCCGC---ATTGTTATTGCGGACGTCATCATGATCGCCACCGGTTACCTCGGTGAG---------GTT------------------GCT---------------------------------------------------------ACG---GAAGGA---------ACC---------------------------GCCGCCGCG------------------TGGATCTTC---TTCCTCATCTCCAGCGCGGCCTGGGTCTACATCGTCTGGGCAGTG---------------TTC------CAG------------ATCAAGCTCGATGGCATG---------------CCCGACTACGCA---GCC---AGC---GCA---GTG---CGT---ATCATG---CGACGCTTCGTGATGCTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTTPLLLVEFGLIVAI---A-GAASK-GF------------VRR-IVIADVIMIATGYLGE---V------A-------------------T-EG---T---------AAA------WIF-FLISSAAWVYIVWAV-----F--Q----IKLDGM-----PDYA-A-S-A-V-R-IM-RRFVML-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ929697 [I-Firmicutes-Exiguobacterium] PRGD_OTU200_85146d3a95a86d725c0d072d8c0f1865 gb|KJ929697| PRGD_OTU200_85146d3a95a86d725c0d072d8c0f1865, putative proteorhodopsin gene, partial cds. PRGD_OTU200_85146d3a95a86d725c0d072d8c0f1865, putative proteorhodopsin gene, partial cds. KJ929697 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185; 67.49, -168.12) TTGCTTACCACCCCACTGCTCTTGGTGGAGTTTGGTCTGATCGTCGCAATTGCTGGTGCTGCCAGCAAGGGCTTCGTGCGCCGCATTGTTATTGCGGACATCATCATGATCGCTACCGGTTACCTCGGTGAGGTCGCCACAGAAGGAACCGCCTCCGCGTGGATCTTCTTCATCATCTCCAGCGCCGCCTGGGTCTACATCGTCTGGGCAGTGTTCCAGATCAAGCTCGATGGTATGCCCGACTACGCAGCCAACGCCGTGCGCATCATGCGTAACTTCGTCATGCTC LLTTPLLLVEFGLIVAIAGAASKGFVRRIVIADIIMIATGYLGEVATEGTASAWIFFIISSAAWVYIVWAVFQIKLDGMPDYAANAVRIMRNFVML ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTTACCACCCCACTGCTCTTGGTGGAGTTTGGTCTGATCGTCGCAATT---------GCT---GGTGCTGCCAGCAAG---GGCTTC------------------------------------GTGCGCCGC---ATTGTTATTGCGGACATCATCATGATCGCTACCGGTTACCTCGGTGAG---------GTC------------------GCC---------------------------------------------------------ACA---GAAGGA---------ACC---------------------------GCCTCCGCG------------------TGGATCTTC---TTCATCATCTCCAGCGCCGCCTGGGTCTACATCGTCTGGGCAGTG---------------TTC------CAG------------ATCAAGCTCGATGGTATG---------------CCCGACTACGCA---GCC---AAC---GCC---GTG---CGC---ATCATG---CGTAACTTCGTCATGCTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTTPLLLVEFGLIVAI---A-GAASK-GF------------VRR-IVIADIIMIATGYLGE---V------A-------------------T-EG---T---------ASA------WIF-FIISSAAWVYIVWAV-----F--Q----IKLDGM-----PDYA-A-N-A-V-R-IM-RNFVML-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ929478 [I-Firmicutes-Exiguobacterium] PRGD_OTU133_1f2e4dfa3e8af18f56f006b75a7830d0 gb|KJ929478| PRGD_OTU133_1f2e4dfa3e8af18f56f006b75a7830d0, putative proteorhodopsin gene, partial cds. PRGD_OTU133_1f2e4dfa3e8af18f56f006b75a7830d0, putative proteorhodopsin gene, partial cds. KJ929478 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.935, 18.508), Indian Ocean (-14.48, 113.45) TTGCTCACCACTCCGTTGCTCCTGGTGGAGTTCGGTTTGATTGTTGCGATTGCTGGAGCTGCTTCCAAGGGCTTCGTTACTCGCCTCGTCATTGCGGACATCATCATGATCGCCACCGGTTACCTCGGTGAGATCGGCATGGAGGGCGACATGTCCACCATCGTGTGGTTCGTCATTTCGTCCCTCGCATGGCTCTACATCGTGTACGCGGTATTCCAGATCAAGATCGATGGAATGCCCGAATACGCTGCTAGCGCTGTGAAGATCATGCGCCGCTTCGTGATGCTC LLTTPLLLVEFGLIVAIAGAASKGFVTRLVIADIIMIATGYLGEIGMEGDMSTIVWFVISSLAWLYIVYAVFQIKIDGMPEYAASAVKIMRRFVML ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTCACCACTCCGTTGCTCCTGGTGGAGTTCGGTTTGATTGTTGCGATT---------GCT---GGAGCTGCTTCCAAG---GGCTTC------------------------------------GTTACTCGC---CTCGTCATTGCGGACATCATCATGATCGCCACCGGTTACCTCGGTGAG---------ATC------------------GGC---------------------------------------------------------ATG---GAGGGC---------GAC---------------------------ATGTCCACC------------------ATCGTGTGG---TTCGTCATTTCGTCCCTCGCATGGCTCTACATCGTGTACGCGGTA---------------TTC------CAG------------ATCAAGATCGATGGAATG---------------CCCGAATACGCT---GCT---AGC---GCT---GTG---AAG---ATCATG---CGCCGCTTCGTGATGCTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTTPLLLVEFGLIVAI---A-GAASK-GF------------VTR-LVIADIIMIATGYLGE---I------G-------------------M-EG---D---------MST------IVW-FVISSLAWLYIVYAV-----F--Q----IKIDGM-----PEYA-A-S-A-V-K-IM-RRFVML-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ929373 [I-Firmicutes-Exiguobacterium] PRGD_OTU112_9b4331ab94a27e509c88b2d0d18b5c3e gb|KJ929373| PRGD_OTU112_9b4331ab94a27e509c88b2d0d18b5c3e, putative proteorhodopsin gene, partial cds. PRGD_OTU112_9b4331ab94a27e509c88b2d0d18b5c3e, putative proteorhodopsin gene, partial cds. KJ929373 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.935 18.508 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) TTTATCACAGTACCACTACAGATCATTGAGTTTTATCTGATTCTGAGTGCCGTCACAAAAGTCAGCCCTTCGGTATTCTGGCGTTTGCTCATCGCATCCGTCGTCATGCTAGTAGCTGGTTATATCGGTGAGGCAGGATTCGGAAGTGCCATGATTTACTTCGGTATCGGAATGCTCGCCTGGTTCGCAATACTTTATGAAGTCTTCTTCGGTGTTGCAGGATACATCTACAGCAAAGTATCTCATGTGCCAACAAAGATCGCATTCAATGGTTTACGTTTTATCGTCACGGTC FITVPLQIIEFYLILSAVTKVSPSVFWRLLIASVVMLVAGYIGEAGFGSAMIYFGIGMLAWFAILYEVFFGVAGYIYSKVSHVPTKIAFNGLRFIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATCACAGTACCACTACAGATCATTGAGTTTTATCTGATTCTGAGTGCC---------GTC---ACAAAAGTCAGCCCT---TCGGTA------------------------------------TTCTGGCGT---TTGCTCATCGCATCCGTCGTCATGCTAGTAGCTGGTTATATCGGTGAG---------GCA------------------GGA------TTC---------------------------------GGA------------------------------------------------------------------AGTGCC------------------ATGATTTAC---TTCGGTATCGGAATGCTCGCCTGGTTCGCAATACTTTATGAAGTC---------------TTC------TTC---GGTGTTGCAGGATACATCTACAGCAAA------GTA---TCTCATGTGCCAACA---AAG---ATC---GCA---TTC---AAT---GGTTTA---CGTTTTATCGTCACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIIEFYLILSA---V-TKVSP-SV------------FWR-LLIASVVMLVAGYIGE---A------G--F-----------G----------------------SA------MIY-FGIGMLAWFAILYEV-----F--F-GVAGYIYSK--V-SHVPT-K-I-A-F-N-GL-RFIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ929372 [I-Firmicutes-Exiguobacterium] PRGD_OTU112_8b690d4ad2aba86bde4faef3f378093f gb|KJ929372| PRGD_OTU112_8b690d4ad2aba86bde4faef3f378093f, putative proteorhodopsin gene, partial cds. PRGD_OTU112_8b690d4ad2aba86bde4faef3f378093f, putative proteorhodopsin gene, partial cds. KJ929372 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.935 18.508 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419) TTTATCACAGTACCACTACAGATCATTGAGTTTTATCTGATTCTGAGTGCCGTCACAAAAGTCAGCCCTTCGGTATTCTGGCGTTTGCTCATCGCATCCGTCGTCATGCTAGTAGCTGGTTATATCGGTGAGGCAGGATTCGGAAGTGCCATGATTTACTTCGGCATTGGAATGCTCGCCTGGTTCGCAATACTTTATGAAGTGTTCTTCGGTGTTGCAGGATACATCTACAGCAAAGTATCTCATGTGCCAACAAAGATCGCATTCAATGGTTTACGTTTTATCGTCACGGTC FITVPLQIIEFYLILSAVTKVSPSVFWRLLIASVVMLVAGYIGEAGFGSAMIYFGIGMLAWFAILYEVFFGVAGYIYSKVSHVPTKIAFNGLRFIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATCACAGTACCACTACAGATCATTGAGTTTTATCTGATTCTGAGTGCC---------GTC---ACAAAAGTCAGCCCT---TCGGTA------------------------------------TTCTGGCGT---TTGCTCATCGCATCCGTCGTCATGCTAGTAGCTGGTTATATCGGTGAG---------GCA------------------GGA------TTC---------------------------------GGA------------------------------------------------------------------AGTGCC------------------ATGATTTAC---TTCGGCATTGGAATGCTCGCCTGGTTCGCAATACTTTATGAAGTG---------------TTC------TTC---GGTGTTGCAGGATACATCTACAGCAAA------GTA---TCTCATGTGCCAACA---AAG---ATC---GCA---TTC---AAT---GGTTTA---CGTTTTATCGTCACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIIEFYLILSA---V-TKVSP-SV------------FWR-LLIASVVMLVAGYIGE---A------G--F-----------G----------------------SA------MIY-FGIGMLAWFAILYEV-----F--F-GVAGYIYSK--V-SHVPT-K-I-A-F-N-GL-RFIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ929370 [I-Firmicutes-Exiguobacterium] PRGD_OTU112_5d7df6229b66a850b5a9e445cde1085f gb|KJ929370| PRGD_OTU112_5d7df6229b66a850b5a9e445cde1085f, putative proteorhodopsin gene, partial cds. PRGD_OTU112_5d7df6229b66a850b5a9e445cde1085f, putative proteorhodopsin gene, partial cds. KJ929370 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTTATCACGGTACCTTTACAGATCGTTGAGTTTTATCTGATTCTAAGTGCCGTCACAAAAGTCAGCCCCTCAGTATTCTGGCGTTTGATCATCGCATCCGTCGTTATGCTCGTGGCTGGTTATATCGGTGAGGCAGGATTCGGAAGCGCCATGATTTACTTCGGTATCGGAATGCTCGCCTGGTTCGCAATACTTTATGAAGTGTTCTTCGGTGTTGCAGGATACATCTACAGCAAAGTATCTCATGTGCCAACAAAGATTGCATTCAATGGTTTGCGTTTTATCGTCACAGTC FITVPLQIVEFYLILSAVTKVSPSVFWRLIIASVVMLVAGYIGEAGFGSAMIYFGIGMLAWFAILYEVFFGVAGYIYSKVSHVPTKIAFNGLRFIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATCACGGTACCTTTACAGATCGTTGAGTTTTATCTGATTCTAAGTGCC---------GTC---ACAAAAGTCAGCCCC---TCAGTA------------------------------------TTCTGGCGT---TTGATCATCGCATCCGTCGTTATGCTCGTGGCTGGTTATATCGGTGAG---------GCA------------------GGA------TTC---------------------------------GGA------------------------------------------------------------------AGCGCC------------------ATGATTTAC---TTCGGTATCGGAATGCTCGCCTGGTTCGCAATACTTTATGAAGTG---------------TTC------TTC---GGTGTTGCAGGATACATCTACAGCAAA------GTA---TCTCATGTGCCAACA---AAG---ATT---GCA---TTC---AAT---GGTTTG---CGTTTTATCGTCACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIVEFYLILSA---V-TKVSP-SV------------FWR-LIIASVVMLVAGYIGE---A------G--F-----------G----------------------SA------MIY-FGIGMLAWFAILYEV-----F--F-GVAGYIYSK--V-SHVPT-K-I-A-F-N-GL-RFIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ929371 [I-Firmicutes-Exiguobacterium] PRGD_OTU112_89dfdd1ec937084cfa4de29df06660a8 gb|KJ929371| PRGD_OTU112_89dfdd1ec937084cfa4de29df06660a8, putative proteorhodopsin gene, partial cds. PRGD_OTU112_89dfdd1ec937084cfa4de29df06660a8, putative proteorhodopsin gene, partial cds. KJ929371 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTTATCACGGTACCTTTACAGATCGTTGAGTTTTATCTGATTCTAAGTGCCGTCACAAAAGTCAGCCCCTCAGTATTCTGGCGTTTGATCATCGCATCCGTCGTTATGCTCGTGGCTGGTTATATCGGTGAGGCAGGATTCGGAAGCGCCATGATTTACTTCGGCATTGGAATGCTCGCCTGGTTCGCAATACTTTATGAAGTGTTCTTCGGTGTTGCAGGATACATCTACAGCAAAGTATCTCATGTGCCAACAAAGATCGCATTCAATGGTTTACGTTTTATCGTCACGGTC FITVPLQIVEFYLILSAVTKVSPSVFWRLIIASVVMLVAGYIGEAGFGSAMIYFGIGMLAWFAILYEVFFGVAGYIYSKVSHVPTKIAFNGLRFIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATCACGGTACCTTTACAGATCGTTGAGTTTTATCTGATTCTAAGTGCC---------GTC---ACAAAAGTCAGCCCC---TCAGTA------------------------------------TTCTGGCGT---TTGATCATCGCATCCGTCGTTATGCTCGTGGCTGGTTATATCGGTGAG---------GCA------------------GGA------TTC---------------------------------GGA------------------------------------------------------------------AGCGCC------------------ATGATTTAC---TTCGGCATTGGAATGCTCGCCTGGTTCGCAATACTTTATGAAGTG---------------TTC------TTC---GGTGTTGCAGGATACATCTACAGCAAA------GTA---TCTCATGTGCCAACA---AAG---ATC---GCA---TTC---AAT---GGTTTA---CGTTTTATCGTCACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIVEFYLILSA---V-TKVSP-SV------------FWR-LIIASVVMLVAGYIGE---A------G--F-----------G----------------------SA------MIY-FGIGMLAWFAILYEV-----F--F-GVAGYIYSK--V-SHVPT-K-I-A-F-N-GL-RFIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ929369 [I-Firmicutes-Exiguobacterium] PRGD_OTU112_5b421ecde0bf12814dd49841cadf5fe9 gb|KJ929369| PRGD_OTU112_5b421ecde0bf12814dd49841cadf5fe9, putative proteorhodopsin gene, partial cds. PRGD_OTU112_5b421ecde0bf12814dd49841cadf5fe9, putative proteorhodopsin gene, partial cds. KJ929369 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTTATCACAGTACCATTACAGATTGTTGAGTTTTATTTGATTCTAAGTGCTGTCACAAAAGTCAGCCCGTCTGTATTCTGGCGTTTAATCATCGCATCCGTCGTTATGCTCGTGGCTGGTTATATCGGTGAGGCAGGATTCGGAAGCGCCATGATTTACTTCGGCATTGGAATGCTCGCCTGGTTCGCAATACTTTATGAAGTGTTCTTCGGTGTTGCAGGATACATCTACAGCAAAGTATCTCATGTGCCAACAAAGATCGCATTCAATGGTTTACGTTTTATCGTCACGGTC FITVPLQIVEFYLILSAVTKVSPSVFWRLIIASVVMLVAGYIGEAGFGSAMIYFGIGMLAWFAILYEVFFGVAGYIYSKVSHVPTKIAFNGLRFIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATCACAGTACCATTACAGATTGTTGAGTTTTATTTGATTCTAAGTGCT---------GTC---ACAAAAGTCAGCCCG---TCTGTA------------------------------------TTCTGGCGT---TTAATCATCGCATCCGTCGTTATGCTCGTGGCTGGTTATATCGGTGAG---------GCA------------------GGA------TTC---------------------------------GGA------------------------------------------------------------------AGCGCC------------------ATGATTTAC---TTCGGCATTGGAATGCTCGCCTGGTTCGCAATACTTTATGAAGTG---------------TTC------TTC---GGTGTTGCAGGATACATCTACAGCAAA------GTA---TCTCATGTGCCAACA---AAG---ATC---GCA---TTC---AAT---GGTTTA---CGTTTTATCGTCACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIVEFYLILSA---V-TKVSP-SV------------FWR-LIIASVVMLVAGYIGE---A------G--F-----------G----------------------SA------MIY-FGIGMLAWFAILYEV-----F--F-GVAGYIYSK--V-SHVPT-K-I-A-F-N-GL-RFIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ929368 [I-Firmicutes-Exiguobacterium] PRGD_OTU112_otuREP_f6903ac31e2f77c7be33fcebae88200a gb|KJ929368| PRGD_OTU112_otuREP_f6903ac31e2f77c7be33fcebae88200a, putative proteorhodopsin gene, partial cds. PRGD_OTU112_otuREP_f6903ac31e2f77c7be33fcebae88200a, putative proteorhodopsin gene, partial cds. KJ929368 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Indian Ocean (-33.28, 45.35) TTTATCACGGTACCATTACAGATTGTTGAGTTTTATTTGATTCTAAGTGCTGTCACGAAAGTCAGCCCGTCTGTATTCTGGCGTTTAATCATCGCATCCATCGTCATGCTAGTAGCCGGTTATATCGGTGAGGCAGGATTCGGAAGTGCCATGATTTACTTCGGCATTGGAATGCTCGCCTGGTTCGCAATACTTTATGAAGTGTTCTTCGGTGTTGCCGGATACATCTACAGCAAAGTATCTCATGTGCCAACAAAGATCGCATTCAATGGTTTACGTTTTATCGTCACGGTC FITVPLQIVEFYLILSAVTKVSPSVFWRLIIASIVMLVAGYIGEAGFGSAMIYFGIGMLAWFAILYEVFFGVAGYIYSKVSHVPTKIAFNGLRFIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATCACGGTACCATTACAGATTGTTGAGTTTTATTTGATTCTAAGTGCT---------GTC---ACGAAAGTCAGCCCG---TCTGTA------------------------------------TTCTGGCGT---TTAATCATCGCATCCATCGTCATGCTAGTAGCCGGTTATATCGGTGAG---------GCA------------------GGA------TTC---------------------------------GGA------------------------------------------------------------------AGTGCC------------------ATGATTTAC---TTCGGCATTGGAATGCTCGCCTGGTTCGCAATACTTTATGAAGTG---------------TTC------TTC---GGTGTTGCCGGATACATCTACAGCAAA------GTA---TCTCATGTGCCAACA---AAG---ATC---GCA---TTC---AAT---GGTTTA---CGTTTTATCGTCACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIVEFYLILSA---V-TKVSP-SV------------FWR-LIIASIVMLVAGYIGE---A------G--F-----------G----------------------SA------MIY-FGIGMLAWFAILYEV-----F--F-GVAGYIYSK--V-SHVPT-K-I-A-F-N-GL-RFIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ929443 [I-Firmicutes-Exiguobacterium] PRGD_OTU126_00dd06b98ae27ae78f2ee1a6707cdbd4 gb|KJ929443| PRGD_OTU126_00dd06b98ae27ae78f2ee1a6707cdbd4, putative proteorhodopsin gene, partial cds. PRGD_OTU126_00dd06b98ae27ae78f2ee1a6707cdbd4, putative proteorhodopsin gene, partial cds. KJ929443 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTTATTACGGTTCCTCTACAGATCGTTGAGTTTTACTTGATCTTGAGTGCAGTGACCAAAATCAGCCCATCCGTGTTTTGGCGATTGCTAATTGCCTCTATCGTCATGCTTGTGGCAGGTTACATCGGTGAAGCTGGACTTGGTAGCGTCAACATCTTTTTTGCCATCGGCATGGTGGCTTGGTTTGCCATTTTATACGAGATATTCTTCGGAGTTGCAGGCTACCTCTACAGCAAGGTTACGCACATGCCAACCAAAGCTGCATTCAGCGGTCTTCGGCTTGTTGTCACAATT FITVPLQIVEFYLILSAVTKISPSVFWRLLIASIVMLVAGYIGEAGLGSVNIFFAIGMVAWFAILYEIFFGVAGYLYSKVTHMPTKAAFSGLRLVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATTACGGTTCCTCTACAGATCGTTGAGTTTTACTTGATCTTGAGTGCA---------GTG---ACCAAAATCAGCCCA---TCCGTG------------------------------------TTTTGGCGA---TTGCTAATTGCCTCTATCGTCATGCTTGTGGCAGGTTACATCGGTGAA---------GCT------------------GGA------CTT---------------------------------GGT------------------------------------------------------------------AGCGTC------------------AACATCTTT---TTTGCCATCGGCATGGTGGCTTGGTTTGCCATTTTATACGAGATA---------------TTC------TTC---GGAGTTGCAGGCTACCTCTACAGCAAG------GTT---ACGCACATGCCAACC---AAA---GCT---GCA---TTC---AGC---GGTCTT---CGGCTTGTTGTCACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIVEFYLILSA---V-TKISP-SV------------FWR-LLIASIVMLVAGYIGE---A------G--L-----------G----------------------SV------NIF-FAIGMVAWFAILYEI-----F--F-GVAGYLYSK--V-THMPT-K-A-A-F-S-GL-RLVVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ929444 [I-Firmicutes-Exiguobacterium] PRGD_OTU126_4a7f0b444ef862549e6fbd4b233cf3a5 gb|KJ929444| PRGD_OTU126_4a7f0b444ef862549e6fbd4b233cf3a5, putative proteorhodopsin gene, partial cds. PRGD_OTU126_4a7f0b444ef862549e6fbd4b233cf3a5, putative proteorhodopsin gene, partial cds. KJ929444 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637) TTTATTACGGTTCCTCTACAGATCGTTGAGTTTTACTTGATCTTGAGCGCAGTGACCAAAATCAGCCCATCCGTGTTTTGGCGATTGTTGATTGCCTCTATCGTCATGCTTGTGGCAGGCTACATCGGTGAAGCTGGACTTGGTAGCGTCAACATCTTTTTTGCCATCGGCATGGTGGCTTGGTTTGCCATTTTATACGAGATATTCTTCGGAGTTGCAGGCTACCTCTACAGCAAGGTTACGCACATGCCAACCAAAGCTGCATTCAGCGGTCTTCGGCTTGTTGTCACAATT FITVPLQIVEFYLILSAVTKISPSVFWRLLIASIVMLVAGYIGEAGLGSVNIFFAIGMVAWFAILYEIFFGVAGYLYSKVTHMPTKAAFSGLRLVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATTACGGTTCCTCTACAGATCGTTGAGTTTTACTTGATCTTGAGCGCA---------GTG---ACCAAAATCAGCCCA---TCCGTG------------------------------------TTTTGGCGA---TTGTTGATTGCCTCTATCGTCATGCTTGTGGCAGGCTACATCGGTGAA---------GCT------------------GGA------CTT---------------------------------GGT------------------------------------------------------------------AGCGTC------------------AACATCTTT---TTTGCCATCGGCATGGTGGCTTGGTTTGCCATTTTATACGAGATA---------------TTC------TTC---GGAGTTGCAGGCTACCTCTACAGCAAG------GTT---ACGCACATGCCAACC---AAA---GCT---GCA---TTC---AGC---GGTCTT---CGGCTTGTTGTCACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIVEFYLILSA---V-TKISP-SV------------FWR-LLIASIVMLVAGYIGE---A------G--L-----------G----------------------SV------NIF-FAIGMVAWFAILYEI-----F--F-GVAGYLYSK--V-THMPT-K-A-A-F-S-GL-RLVVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ929446 [I-Firmicutes-Exiguobacterium] PRGD_OTU126_d3873d589c9b8fad17948b2cd20acaec gb|KJ929446| PRGD_OTU126_d3873d589c9b8fad17948b2cd20acaec, putative proteorhodopsin gene, partial cds. PRGD_OTU126_d3873d589c9b8fad17948b2cd20acaec, putative proteorhodopsin gene, partial cds. KJ929446 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) TTTATTACGGTTCCTCTACAGATCGTTGAGTTTTACTTGATCTTGAGTGCAGTGACCAAAATCAGCCCATCCGTGTTTTGGCGATTGCTAATTGCCTCTATCGTCATGCTTGTGGCAGGTTACATCGGTGAAGCCGGACTTGGTAGCGTCAACATCTTTTTTGCCATCGGCATGGTGGCTTGGTTTGCCATTTTATACGAGATATTCTTCGGGGTTGCAGGCTACCTCTACAGCAAGGTTACGCACATGCCAACCAAAGCTGCATTCAGCGGTCTTCGGCTTGTTGTGACAATT FITVPLQIVEFYLILSAVTKISPSVFWRLLIASIVMLVAGYIGEAGLGSVNIFFAIGMVAWFAILYEIFFGVAGYLYSKVTHMPTKAAFSGLRLVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATTACGGTTCCTCTACAGATCGTTGAGTTTTACTTGATCTTGAGTGCA---------GTG---ACCAAAATCAGCCCA---TCCGTG------------------------------------TTTTGGCGA---TTGCTAATTGCCTCTATCGTCATGCTTGTGGCAGGTTACATCGGTGAA---------GCC------------------GGA------CTT---------------------------------GGT------------------------------------------------------------------AGCGTC------------------AACATCTTT---TTTGCCATCGGCATGGTGGCTTGGTTTGCCATTTTATACGAGATA---------------TTC------TTC---GGGGTTGCAGGCTACCTCTACAGCAAG------GTT---ACGCACATGCCAACC---AAA---GCT---GCA---TTC---AGC---GGTCTT---CGGCTTGTTGTGACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIVEFYLILSA---V-TKISP-SV------------FWR-LLIASIVMLVAGYIGE---A------G--L-----------G----------------------SV------NIF-FAIGMVAWFAILYEI-----F--F-GVAGYLYSK--V-THMPT-K-A-A-F-S-GL-RLVVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ929442 [I-Firmicutes-Exiguobacterium] PRGD_OTU126_otuREP_82ae5a2f87d94d9f861938f3cfd0be20 gb|KJ929442| PRGD_OTU126_otuREP_82ae5a2f87d94d9f861938f3cfd0be20, putative proteorhodopsin gene, partial cds. PRGD_OTU126_otuREP_82ae5a2f87d94d9f861938f3cfd0be20, putative proteorhodopsin gene, partial cds. KJ929442 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTTATTACAGTTCCTCTACAGATCGTTGAGTTTTACTTGATCTTGAGTGCAGTGACCAAAATCAGCCCATCCGTGTTTTGGCGATTGTTGATTGCCTCTATCGTCATGCTTGTGGCAGGTTACATTGGTGAAGCCGGACTTGGTAGCGTCAACATCTTTTTTGCCATCGGCATGGTGGCTTGGTTTGCCATTTTATACGAGATATTCTTCGGAGTCGCAGGCTACCTCTACAGCAAGGTTACGCACATGCCAACCAAAGCTGCATTCAGCGGTCTTAGGCTTGTTGTGACAATT FITVPLQIVEFYLILSAVTKISPSVFWRLLIASIVMLVAGYIGEAGLGSVNIFFAIGMVAWFAILYEIFFGVAGYLYSKVTHMPTKAAFSGLRLVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATTACAGTTCCTCTACAGATCGTTGAGTTTTACTTGATCTTGAGTGCA---------GTG---ACCAAAATCAGCCCA---TCCGTG------------------------------------TTTTGGCGA---TTGTTGATTGCCTCTATCGTCATGCTTGTGGCAGGTTACATTGGTGAA---------GCC------------------GGA------CTT---------------------------------GGT------------------------------------------------------------------AGCGTC------------------AACATCTTT---TTTGCCATCGGCATGGTGGCTTGGTTTGCCATTTTATACGAGATA---------------TTC------TTC---GGAGTCGCAGGCTACCTCTACAGCAAG------GTT---ACGCACATGCCAACC---AAA---GCT---GCA---TTC---AGC---GGTCTT---AGGCTTGTTGTGACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIVEFYLILSA---V-TKISP-SV------------FWR-LLIASIVMLVAGYIGE---A------G--L-----------G----------------------SV------NIF-FAIGMVAWFAILYEI-----F--F-GVAGYLYSK--V-THMPT-K-A-A-F-S-GL-RLVVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ929445 [I-Firmicutes-Exiguobacterium] PRGD_OTU126_4cf2418bcbef81dd6216310e5e1f6289 gb|KJ929445| PRGD_OTU126_4cf2418bcbef81dd6216310e5e1f6289, putative proteorhodopsin gene, partial cds. PRGD_OTU126_4cf2418bcbef81dd6216310e5e1f6289, putative proteorhodopsin gene, partial cds. KJ929445 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.935 18.508 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508) TTTATTACGGTTCCTCTACAGATCGTTGAGTTTTACTTGATCTTGAGTGCAGTGACCAAAATCAGCCCATCCGTGTTTTGGCGATTGTTGATTGCCTCTATCGTCATGCTTGTGGCAGGTTACATCGGTGAAGCCGGACTTGGTAGCGTTAACATCTTTTTTGCCATCGGCATGGTGGCTTGGTTTGCCATTTTATACGAGATATTCTTCGGGGTTGCAGGGTACCTCTACAGCAAGGTTACGCATTTACCAACCAAAGCTGCGTTCAGCGGCCTTCGGCTTGTTGTGACGATT FITVPLQIVEFYLILSAVTKISPSVFWRLLIASIVMLVAGYIGEAGLGSVNIFFAIGMVAWFAILYEIFFGVAGYLYSKVTHLPTKAAFSGLRLVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATTACGGTTCCTCTACAGATCGTTGAGTTTTACTTGATCTTGAGTGCA---------GTG---ACCAAAATCAGCCCA---TCCGTG------------------------------------TTTTGGCGA---TTGTTGATTGCCTCTATCGTCATGCTTGTGGCAGGTTACATCGGTGAA---------GCC------------------GGA------CTT---------------------------------GGT------------------------------------------------------------------AGCGTT------------------AACATCTTT---TTTGCCATCGGCATGGTGGCTTGGTTTGCCATTTTATACGAGATA---------------TTC------TTC---GGGGTTGCAGGGTACCTCTACAGCAAG------GTT---ACGCATTTACCAACC---AAA---GCT---GCG---TTC---AGC---GGCCTT---CGGCTTGTTGTGACGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIVEFYLILSA---V-TKISP-SV------------FWR-LLIASIVMLVAGYIGE---A------G--L-----------G----------------------SV------NIF-FAIGMVAWFAILYEI-----F--F-GVAGYLYSK--V-THLPT-K-A-A-F-S-GL-RLVVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ929905 [I-Firmicutes-Exiguobacterium] PRGD_OTU356_otuREP_0895026ca93295a26feb00114fef0551 gb|KJ929905| PRGD_OTU356_otuREP_0895026ca93295a26feb00114fef0551, putative proteorhodopsin gene, partial cds. PRGD_OTU356_otuREP_0895026ca93295a26feb00114fef0551, putative proteorhodopsin gene, partial cds. KJ929905 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) TTCATCACTGTGCCACTGCAAATTGTCGAGTTTTACTTGATTTTAAGAGCTGTAACCAAAGTGAGTCCTGTCATGTTTTGGCGACTGATGGTAGCGAGTGTTGTCATGCTTGTTGCAGGGTATATCGGCGAAGCAGGCTTGGGAAGTATTGTCATCAGCTTTGCGATTGGTATGCTGGCATGGTTTGTCATCCTCTTTGAGATATTCTTTGGCAAAGCCAGTCGTCATTACAGCAAAGACCTAGACAAACCAACAAAATTAGCTTTCAATGGCCTACGCTTTATTGTGACAGTT FITVPLQIVEFYLILRAVTKVSPVMFWRLMVASVVMLVAGYIGEAGLGSIVISFAIGMLAWFVILFEIFFGKASRHYSKDLDKPTKLAFNGLRFIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCATCACTGTGCCACTGCAAATTGTCGAGTTTTACTTGATTTTAAGAGCT---------GTA---ACCAAAGTGAGTCCT---GTCATG------------------------------------TTTTGGCGA---CTGATGGTAGCGAGTGTTGTCATGCTTGTTGCAGGGTATATCGGCGAA---------GCA------------------GGC------TTG---------------------------------GGA------------------------------------------------------------------AGTATT------------------GTCATCAGC---TTTGCGATTGGTATGCTGGCATGGTTTGTCATCCTCTTTGAGATA---------------TTC------TTT---GGCAAAGCCAGTCGTCATTACAGCAAA------GAC---CTAGACAAACCAACA---AAA---TTA---GCT---TTC---AAT---GGCCTA---CGCTTTATTGTGACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIVEFYLILRA---V-TKVSP-VM------------FWR-LMVASVVMLVAGYIGE---A------G--L-----------G----------------------SI------VIS-FAIGMLAWFVILFEI-----F--F-GKASRHYSK--D-LDKPT-K-L-A-F-N-GL-RFIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ929751 [I-Firmicutes-Exiguobacterium] PRGD_OTU227_536355f3c1c805f4b88a5b35ffd71ec9 gb|KJ929751| PRGD_OTU227_536355f3c1c805f4b88a5b35ffd71ec9, putative proteorhodopsin gene, partial cds. PRGD_OTU227_536355f3c1c805f4b88a5b35ffd71ec9, putative proteorhodopsin gene, partial cds. KJ929751 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) TTCATCACAGTGCCGCTACAGATCGTTGAGTTCTATTTAATACTAAGCGCAGTCACGAAAGTTAGTCCTTCGGTCTTCTGGCGATTGCTCATTGCCAGTGTCGTGATGCTTGTAGCTGGGTACATTGGTGAGGCAGGGCTCGGTGATGTTACTTTGTTCTTTGCGCTGGGAATGTTCTCATGGTTCGTGATCCTTTTCGAAGTGTTTTTTGGCGTGGCAGGTCACTTGTACAGCAAGGTCACTCACGCACCGACACGATTTGCTTTCAACGGGCTTCGCTTCATCGTCACCATC FITVPLQIVEFYLILSAVTKVSPSVFWRLLIASVVMLVAGYIGEAGLGDVTLFFALGMFSWFVILFEVFFGVAGHLYSKVTHAPTRFAFNGLRFIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCATCACAGTGCCGCTACAGATCGTTGAGTTCTATTTAATACTAAGCGCA---------GTC---ACGAAAGTTAGTCCT---TCGGTC------------------------------------TTCTGGCGA---TTGCTCATTGCCAGTGTCGTGATGCTTGTAGCTGGGTACATTGGTGAG---------GCA------------------GGG------CTC---------------------------------GGT------------------------------------------------------------------GATGTT------------------ACTTTGTTC---TTTGCGCTGGGAATGTTCTCATGGTTCGTGATCCTTTTCGAAGTG---------------TTT------TTT---GGCGTGGCAGGTCACTTGTACAGCAAG------GTC---ACTCACGCACCGACA---CGA---TTT---GCT---TTC---AAC---GGGCTT---CGCTTCATCGTCACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIVEFYLILSA---V-TKVSP-SV------------FWR-LLIASVVMLVAGYIGE---A------G--L-----------G----------------------DV------TLF-FALGMFSWFVILFEV-----F--F-GVAGHLYSK--V-THAPT-R-F-A-F-N-GL-RFIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ929750 [I-Firmicutes-Exiguobacterium] PRGD_OTU227_otuREP_b6fe571a4e79b5016d775190d9e22e9b gb|KJ929750| PRGD_OTU227_otuREP_b6fe571a4e79b5016d775190d9e22e9b, putative proteorhodopsin gene, partial cds. PRGD_OTU227_otuREP_b6fe571a4e79b5016d775190d9e22e9b, putative proteorhodopsin gene, partial cds. KJ929750 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Indian Ocean (-33.28, 45.35) TTCATCACAGTGCCGTTACAGATCGTCGAGTTCTATTTAATCCTAAGCGCAGTCACAAAAGTGAGCCCTTCGGTCTTTTGGCGATTGCTCATTGCCAGTGTCGTGATGCTCGTAGCTGGGTACATTGGCGAAGCAGGGCTCGGTGATGTTACTTTGTTCTTCGCGCTGGGAATGTTCTCATGGTTCGTGATTCTTTTCGAAGTATTTTTTGGTGTGGCTGGTCACTTGTACAGCAAGGTCACCCACGCACCAACACGATTTGCCTTCAACGGACTTCGCTTCATCGTCACCATC FITVPLQIVEFYLILSAVTKVSPSVFWRLLIASVVMLVAGYIGEAGLGDVTLFFALGMFSWFVILFEVFFGVAGHLYSKVTHAPTRFAFNGLRFIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCATCACAGTGCCGTTACAGATCGTCGAGTTCTATTTAATCCTAAGCGCA---------GTC---ACAAAAGTGAGCCCT---TCGGTC------------------------------------TTTTGGCGA---TTGCTCATTGCCAGTGTCGTGATGCTCGTAGCTGGGTACATTGGCGAA---------GCA------------------GGG------CTC---------------------------------GGT------------------------------------------------------------------GATGTT------------------ACTTTGTTC---TTCGCGCTGGGAATGTTCTCATGGTTCGTGATTCTTTTCGAAGTA---------------TTT------TTT---GGTGTGGCTGGTCACTTGTACAGCAAG------GTC---ACCCACGCACCAACA---CGA---TTT---GCC---TTC---AAC---GGACTT---CGCTTCATCGTCACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIVEFYLILSA---V-TKVSP-SV------------FWR-LLIASVVMLVAGYIGE---A------G--L-----------G----------------------DV------TLF-FALGMFSWFVILFEV-----F--F-GVAGHLYSK--V-THAPT-R-F-A-F-N-GL-RFIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ929818 [I-Firmicutes-Exiguobacterium] PRGD_OTU269_otuREP_c71425309e48e320c96d3c5a9b23d844 gb|KJ929818| PRGD_OTU269_otuREP_c71425309e48e320c96d3c5a9b23d844, putative proteorhodopsin gene, partial cds. PRGD_OTU269_otuREP_c71425309e48e320c96d3c5a9b23d844, putative proteorhodopsin gene, partial cds. KJ929818 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-14.48, 113.45) TTCATCACTGTGCCGTTACAAATTGTAGAATTCTACCTAATTCTAAGTGCGGTTCGACCCATCGCAGGATCAGTGTTTTGGCGACTACTCATCGCAAGTATCGTGATGTTAGTTGCGGGCTACATTGGAGAGGCTGGCCTCGGAGACGTAATGGTTTACTTCACCGTTGGTATGATTGGTTGGCTAGCAATTCTTTACGAAATATTCTTTGGGCAAGCAAGCGTAGAGTCCAGAAAGATCAGCAATGCACCAACCAAGCTAGCGTTCGACGGACTACGATTCATCGTCACAGTC FITVPLQIVEFYLILSAVRPIAGSVFWRLLIASIVMLVAGYIGEAGLGDVMVYFTVGMIGWLAILYEIFFGQASVESRKISNAPTKLAFDGLRFIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCATCACTGTGCCGTTACAAATTGTAGAATTCTACCTAATTCTAAGTGCG---------GTT---CGACCCATCGCAGGA---TCAGTG------------------------------------TTTTGGCGA---CTACTCATCGCAAGTATCGTGATGTTAGTTGCGGGCTACATTGGAGAG---------GCT------------------GGC------CTC---------------------------------GGA------------------------------------------------------------------GACGTA------------------ATGGTTTAC---TTCACCGTTGGTATGATTGGTTGGCTAGCAATTCTTTACGAAATA---------------TTC------TTT---GGGCAAGCAAGCGTAGAGTCCAGAAAG------ATC---AGCAATGCACCAACC---AAG---CTA---GCG---TTC---GAC---GGACTA---CGATTCATCGTCACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIVEFYLILSA---V-RPIAG-SV------------FWR-LLIASIVMLVAGYIGE---A------G--L-----------G----------------------DV------MVY-FTVGMIGWLAILYEI-----F--F-GQASVESRK--I-SNAPT-K-L-A-F-D-GL-RFIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ929853 [I-Firmicutes-Exiguobacterium] PRGD_OTU304_otuREP_f01d833f0aebcf293f09453de2ffa282 gb|KJ929853| PRGD_OTU304_otuREP_f01d833f0aebcf293f09453de2ffa282, putative proteorhodopsin gene, partial cds. PRGD_OTU304_otuREP_f01d833f0aebcf293f09453de2ffa282, putative proteorhodopsin gene, partial cds. KJ929853 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-33.28, 45.35) TTCATCACGGTACCATTACAGATTGTTGAATTCTACCTAATTCTTGGTGCAGTAACGCGGGTTGAAGCTTCATTATTTTGGAAGTTATTCATTGCCAGTATTGTTATGTTGGTGGCAGGATATGTTGGCGAATCTGGTGCAGGAGACTTGGTGGTGAGCTTCATCATTGGCATGATTGGTTGGTTGTACATCTTATTCCAAGTATTTTTTGGAGAAGCCAGTCATCATTATGAGAAGATGAACAGTGATTCAGCCAAGCTTGCATTCAACGGGCTACGGTGGATTGTTACTGTG FITVPLQIVEFYLILGAVTRVEASLFWKLFIASIVMLVAGYVGESGAGDLVVSFIIGMIGWLYILFQVFFGEASHHYEKMNSDSAKLAFNGLRWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCATCACGGTACCATTACAGATTGTTGAATTCTACCTAATTCTTGGTGCA---------GTA---ACGCGGGTTGAAGCT---TCATTA------------------------------------TTTTGGAAG---TTATTCATTGCCAGTATTGTTATGTTGGTGGCAGGATATGTTGGCGAA---------TCT------------------GGT------GCA---------------------------------GGA------------------------------------------------------------------GACTTG------------------GTGGTGAGC---TTCATCATTGGCATGATTGGTTGGTTGTACATCTTATTCCAAGTA---------------TTT------TTT---GGAGAAGCCAGTCATCATTATGAGAAG------ATG---AACAGTGATTCAGCC---AAG---CTT---GCA---TTC---AAC---GGGCTA---CGGTGGATTGTTACTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIVEFYLILGA---V-TRVEA-SL------------FWK-LFIASIVMLVAGYVGE---S------G--A-----------G----------------------DL------VVS-FIIGMIGWLYILFQV-----F--F-GEASHHYEK--M-NSDSA-K-L-A-F-N-GL-RWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ929809 [I-Firmicutes-Exiguobacterium] PRGD_OTU260_otuREP_c207e7ab624af25fd4dd4f6b889847b1 gb|KJ929809| PRGD_OTU260_otuREP_c207e7ab624af25fd4dd4f6b889847b1, putative proteorhodopsin gene, partial cds. PRGD_OTU260_otuREP_c207e7ab624af25fd4dd4f6b889847b1, putative proteorhodopsin gene, partial cds. KJ929809 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-33.28, 45.35) ATGATTACGGTACCACTACAAATAGTCGAGTTTTTCCTCATACTAAACGCAGTAGGAAAGGTTCCAGGCACTGTATTTTGGCGGTTACTGATAGCAAGTACGGTGATGTTGGTTGCGGGATACATCGGAGAGTCTGGTCTTGGGAACGCAATGGTTTACTTTACCATTGGGATGCTGGGATGGCTCACAATACTGTATGAAATTTTTTATGGAGAGGCAGCAAGCATCAGTGGTGACTTAAAAAGCAAACCCACTAAGATTGCATTTGATGGATTACGATTAATCGTAACAGTG MITVPLQIVEFFLILNAVGKVPGTVFWRLLIASTVMLVAGYIGESGLGNAMVYFTIGMLGWLTILYEIFYGEAASISGDLKSKPTKIAFDGLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGATTACGGTACCACTACAAATAGTCGAGTTTTTCCTCATACTAAACGCA---------GTA---GGAAAGGTTCCAGGC---ACTGTA------------------------------------TTTTGGCGG---TTACTGATAGCAAGTACGGTGATGTTGGTTGCGGGATACATCGGAGAG---------TCT------------------GGT------CTT---------------------------------GGG------------------------------------------------------------------AACGCA------------------ATGGTTTAC---TTTACCATTGGGATGCTGGGATGGCTCACAATACTGTATGAAATT---------------TTT------TAT---GGAGAGGCAGCAAGCATCAGTGGTGAC------TTA---AAAAGCAAACCCACT---AAG---ATT---GCA---TTT---GAT---GGATTA---CGATTAATCGTAACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MITVPLQIVEFFLILNA---V-GKVPG-TV------------FWR-LLIASTVMLVAGYIGE---S------G--L-----------G----------------------NA------MVY-FTIGMLGWLTILYEI-----F--Y-GEAASISGD--L-KSKPT-K-I-A-F-D-GL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ929736 [I-Firmicutes-Exiguobacterium] PRGD_OTU220_otuREP_a45f2de25ada0f13f5bc56878f8d7f44 gb|KJ929736| PRGD_OTU220_otuREP_a45f2de25ada0f13f5bc56878f8d7f44, putative proteorhodopsin gene, partial cds. PRGD_OTU220_otuREP_a45f2de25ada0f13f5bc56878f8d7f44, putative proteorhodopsin gene, partial cds. KJ929736 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.935 18.508 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTTATAACAGTGCCGCTACAAATTGTAGAGTTTTATCTCATACTTGCTGCAGTTGCGATGGTGCCGATCATGCTTTTTTGGCGTCTGCTTACAGCATCCGTCCTGATGCTTGTGTTCGGTTACATTGGCGAAGCTGGGCTTGGAGATGTAACATTTTACTTCGGCTTAGGTATGATAGCCTGGTTTGTGATTCTTTACGAAATATTCTTAGGTGAAGCAAGTGAGATCAGCAGTAATTCTACAAGCCCTGCATGTCAATTAGCTTTTACTAGTTTGCGCCTAGTTGTAACCGTA FITVPLQIVEFYLILAAVAMVPIMLFWRLLTASVLMLVFGYIGEAGLGDVTFYFGLGMIAWFVILYEIFLGEASEISSNSTSPACQLAFTSLRLVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATAACAGTGCCGCTACAAATTGTAGAGTTTTATCTCATACTTGCTGCA---------GTT---GCGATGGTGCCGATC---ATGCTT------------------------------------TTTTGGCGT---CTGCTTACAGCATCCGTCCTGATGCTTGTGTTCGGTTACATTGGCGAA---------GCT------------------GGG------CTT---------------------------------GGA------------------------------------------------------------------GATGTA------------------ACATTTTAC---TTCGGCTTAGGTATGATAGCCTGGTTTGTGATTCTTTACGAAATA---------------TTC------TTA---GGTGAAGCAAGTGAGATCAGCAGTAAT------TCT---ACAAGCCCTGCATGT---CAA---TTA---GCT---TTT---ACT---AGTTTG---CGCCTAGTTGTAACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIVEFYLILAA---V-AMVPI-ML------------FWR-LLTASVLMLVFGYIGE---A------G--L-----------G----------------------DV------TFY-FGLGMIAWFVILYEI-----F--L-GEASEISSN--S-TSPAC-Q-L-A-F-T-SL-RLVVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ929737 [I-Firmicutes-Exiguobacterium] PRGD_OTU220_e4f423b4e5aaa8c0b98e0dc1d477e702 gb|KJ929737| PRGD_OTU220_e4f423b4e5aaa8c0b98e0dc1d477e702, putative proteorhodopsin gene, partial cds. PRGD_OTU220_e4f423b4e5aaa8c0b98e0dc1d477e702, putative proteorhodopsin gene, partial cds. KJ929737 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-14.48, 113.45; -33.28, 45.35) TTTATAACAGTGCCGCTACAAATTGTAGAGTTTTATTTGATACTTGCTGCAGTTGCAATGGTGCCCATCATGCTTTTTTGGCGTCTACTTACAGCATCGGTCCTCATGCTTGTGTTCGGTTACATTGGTGAAGCTGGACTTGGAGATGTAACCTTCTACTTCGGCTTAGGTATGATAGCCTGGTTTGTCATTCTTTATGAAATATTCTTAGGTGAAGCAAGTGAGATTAGCAGTAATTCTACAAGCCCTGCATGTCAACTAGCTTTTACTAGTTTGCGTCTAGTTGTAACTGTA FITVPLQIVEFYLILAAVAMVPIMLFWRLLTASVLMLVFGYIGEAGLGDVTFYFGLGMIAWFVILYEIFLGEASEISSNSTSPACQLAFTSLRLVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATAACAGTGCCGCTACAAATTGTAGAGTTTTATTTGATACTTGCTGCA---------GTT---GCAATGGTGCCCATC---ATGCTT------------------------------------TTTTGGCGT---CTACTTACAGCATCGGTCCTCATGCTTGTGTTCGGTTACATTGGTGAA---------GCT------------------GGA------CTT---------------------------------GGA------------------------------------------------------------------GATGTA------------------ACCTTCTAC---TTCGGCTTAGGTATGATAGCCTGGTTTGTCATTCTTTATGAAATA---------------TTC------TTA---GGTGAAGCAAGTGAGATTAGCAGTAAT------TCT---ACAAGCCCTGCATGT---CAA---CTA---GCT---TTT---ACT---AGTTTG---CGTCTAGTTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIVEFYLILAA---V-AMVPI-ML------------FWR-LLTASVLMLVFGYIGE---A------G--L-----------G----------------------DV------TFY-FGLGMIAWFVILYEI-----F--L-GEASEISSN--S-TSPAC-Q-L-A-F-T-SL-RLVVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ929898 [I-Firmicutes-Exiguobacterium] PRGD_OTU349_otuREP_6156ab345209e90f47c8bc10530a77b8 gb|KJ929898| PRGD_OTU349_otuREP_6156ab345209e90f47c8bc10530a77b8, putative proteorhodopsin gene, partial cds. PRGD_OTU349_otuREP_6156ab345209e90f47c8bc10530a77b8, putative proteorhodopsin gene, partial cds. KJ929898 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45; -33.28, 45.35) TTTATAACCGTGCCATTACAGATTGTAGAGTTCTATTTGATACTTGCAGCAGTGGCAAGCGTGGCATACAGCGTTTTTTGGCGGCTCCTATTGGCATCTGTCTTGATGCTGGTTTTTGGGTACATAGGTGAGGCTGGTATTGGTGATGTCACTATTTACTTTGGTCTTGGAATGGTAGCCTGGTTTGCAATTTTGTACGAAATATTTCTTGGTGAGGCCAGTGTGATCAATGCGCGCTCAAGCAACCCTGCTTGTCAATTGGCGTTCACCAGTTTGCGTTTAGTGGTGACGGTA FITVPLQIVEFYLILAAVASVAYSVFWRLLLASVLMLVFGYIGEAGIGDVTIYFGLGMVAWFAILYEIFLGEASVINARSSNPACQLAFTSLRLVVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATAACCGTGCCATTACAGATTGTAGAGTTCTATTTGATACTTGCAGCA---------GTG---GCAAGCGTGGCATAC---AGCGTT------------------------------------TTTTGGCGG---CTCCTATTGGCATCTGTCTTGATGCTGGTTTTTGGGTACATAGGTGAG---------GCT------------------GGT------ATT---------------------------------GGT------------------------------------------------------------------GATGTC------------------ACTATTTAC---TTTGGTCTTGGAATGGTAGCCTGGTTTGCAATTTTGTACGAAATA---------------TTT------CTT---GGTGAGGCCAGTGTGATCAATGCGCGC------TCA---AGCAACCCTGCTTGT---CAA---TTG---GCG---TTC---ACC---AGTTTG---CGTTTAGTGGTGACGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIVEFYLILAA---V-ASVAY-SV------------FWR-LLLASVLMLVFGYIGE---A------G--I-----------G----------------------DV------TIY-FGLGMVAWFAILYEI-----F--L-GEASVINAR--S-SNPAC-Q-L-A-F-T-SL-RLVVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ929815 [I-Firmicutes-Exiguobacterium] PRGD_OTU266_otuREP_3ec980e2497a518543aa9191687d228d gb|KJ929815| PRGD_OTU266_otuREP_3ec980e2497a518543aa9191687d228d, putative proteorhodopsin gene, partial cds. PRGD_OTU266_otuREP_3ec980e2497a518543aa9191687d228d, putative proteorhodopsin gene, partial cds. KJ929815 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Mediterranean Sea (33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTTATCACGGTGCCGCTCCAAATTGTTGAGTTTTACCTGATACTAGCTGCTGTTGCGATGGTGCCTTACACTGTTTTTGCTCGACTCCTGATTAGTTCTATTCTCATGTTAATTTTTGGTTATATTGGCGAGTCTGGCCTGGGAGATGTGGATTTTTATTTCGGATTAGGTATGATCGCTTGGTTTGCCATTTTATACGAAGTCTTTTTGGGTGAAGCCAGTAAAATCAACAGCCAATCTACTAGTCCCGCTTGTCAGCTTGCATTTGCTAGTTTGCGTTTGGTTGTAACCATC FITVPLQIVEFYLILAAVAMVPYTVFARLLISSILMLIFGYIGESGLGDVDFYFGLGMIAWFAILYEVFLGEASKINSQSTSPACQLAFASLRLVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATCACGGTGCCGCTCCAAATTGTTGAGTTTTACCTGATACTAGCTGCT---------GTT---GCGATGGTGCCTTAC---ACTGTT------------------------------------TTTGCTCGA---CTCCTGATTAGTTCTATTCTCATGTTAATTTTTGGTTATATTGGCGAG---------TCT------------------GGC------CTG---------------------------------GGA------------------------------------------------------------------GATGTG------------------GATTTTTAT---TTCGGATTAGGTATGATCGCTTGGTTTGCCATTTTATACGAAGTC---------------TTT------TTG---GGTGAAGCCAGTAAAATCAACAGCCAA------TCT---ACTAGTCCCGCTTGT---CAG---CTT---GCA---TTT---GCT---AGTTTG---CGTTTGGTTGTAACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIVEFYLILAA---V-AMVPY-TV------------FAR-LLISSILMLIFGYIGE---S------G--L-----------G----------------------DV------DFY-FGLGMIAWFAILYEV-----F--L-GEASKINSQ--S-TSPAC-Q-L-A-F-A-SL-RLVVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-Exiguobacterium]_KJ929855 [I-Firmicutes-Exiguobacterium] PRGD_OTU306_otuREP_e2c137f8b8d9647181675b2817ed15c9 gb|KJ929855| PRGD_OTU306_otuREP_e2c137f8b8d9647181675b2817ed15c9, putative proteorhodopsin gene, partial cds. PRGD_OTU306_otuREP_e2c137f8b8d9647181675b2817ed15c9, putative proteorhodopsin gene, partial cds. KJ929855 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/Exiguobacterium-like subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster Exiguobacterium-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTTATTACAGTACCACTCCAGATTGTTGAGTTTTATCTTATTTTAGCGGCAGTTGCCGTGGTCCCGTATTTGGTATTTTGGCGGTTACTTCTAGCATCAACTTTAATGCTAGTATTTGGCTACATCGGTGAGGCCGGTATTGGCGATATCAGTTTTTACTTTACTTTGGGTATGATTGCCTGGTTTGCCATATTATATGAGATCTTCTTAGGCGAAGCATCAAAAATCAATAAGGCCTCCACCAGTCCAGCATGTCAATTAGCGTTTAATTCGCTACGATTGGTTGTTACTATC FITVPLQIVEFYLILAAVAVVPYLVFWRLLLASTLMLVFGYIGEAGIGDISFYFTLGMIAWFAILYEIFLGEASKINKASTSPACQLAFNSLRLVVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATTACAGTACCACTCCAGATTGTTGAGTTTTATCTTATTTTAGCGGCA---------GTT---GCCGTGGTCCCGTAT---TTGGTA------------------------------------TTTTGGCGG---TTACTTCTAGCATCAACTTTAATGCTAGTATTTGGCTACATCGGTGAG---------GCC------------------GGT------ATT---------------------------------GGC------------------------------------------------------------------GATATC------------------AGTTTTTAC---TTTACTTTGGGTATGATTGCCTGGTTTGCCATATTATATGAGATC---------------TTC------TTA---GGCGAAGCATCAAAAATCAATAAGGCC------TCC---ACCAGTCCAGCATGT---CAA---TTA---GCG---TTT---AAT---TCGCTA---CGATTGGTTGTTACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIVEFYLILAA---V-AVVPY-LV------------FWR-LLLASTLMLVFGYIGE---A------G--I-----------G----------------------DI------SFY-FTLGMIAWFAILYEI-----F--L-GEASKINKA--S-TSPAC-Q-L-A-F-N-SL-RLVVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes]_KJ929780 [I-Firmicutes] PRGD_OTU242_otuREP_5b0894a060d71061912f7f1d8cdf07f7 gb|KJ929780| PRGD_OTU242_otuREP_5b0894a060d71061912f7f1d8cdf07f7, putative proteorhodopsin gene, partial cds. PRGD_OTU242_otuREP_5b0894a060d71061912f7f1d8cdf07f7, putative proteorhodopsin gene, partial cds. KJ929780 [[proteorhodopsin super-cluster I/Firmicutes-like cluster]] proteorhodopsin super-cluster I Firmicutes-like cluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATTACTGTTCCTCTGTTGATGGTGGAGTTTTTCTTTGTTCTGCGTGCTACTACTCGTTGCTCCGAGGGCGTCTTTTGGCGTCTTTTCTTGGGATCCTTGGTCATGCTTGTTGGTGGATGGCTCGGCGAGGCGGGAGTATTATCCAAGATGATCGGGTTTGTGATTGGTATGGTTGGCTGGGTCTTTCTGCTCTTTGAAGTCTTCGCCGGGGAGGCGGCTAGCCTGAGTTCCGCGTCCGGAAGTGAGGCTGGCACTCGCTGCTTTAACACACTTCGTGGACTTGTCACCGTG LITVPLLMVEFFFVLRATTRCSEGVFWRLFLGSLVMLVGGWLGEAGVLSKMIGFVIGMVGWVFLLFEVFAGEAASLSSASGSEAGTRCFNTLRGLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTTCCTCTGTTGATGGTGGAGTTTTTCTTTGTTCTGCGTGCT---------ACT---ACTCGTTGCTCCGAG---GGCGTC------------------------------------TTTTGGCGT---CTTTTCTTGGGATCCTTGGTCATGCTTGTTGGTGGATGGCTCGGCGAG---------GCG------------------GGA------GTA---------------------------------TTA------------------------------------------------------------------TCCAAG------------------ATGATCGGG---TTTGTGATTGGTATGGTTGGCTGGGTCTTTCTGCTCTTTGAAGTC---------------TTC------GCC---GGGGAGGCGGCTAGCCTGAGTTCCGCG------TCC---GGAAGTGAGGCTGGC---ACT---CGC---TGC---TTT---AAC---ACACTT---CGTGGACTTGTCACCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFFFVLRA---T-TRCSE-GV------------FWR-LFLGSLVMLVGGWLGE---A------G--V-----------L----------------------SK------MIG-FVIGMVGWVFLLFEV-----F--A-GEAASLSSA--S-GSEAG-T-R-C-F-N-TL-RGLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes]_KJ929781 [I-Firmicutes] PRGD_OTU242_e5a19b78350526a03fc0f09e95d33084 gb|KJ929781| PRGD_OTU242_e5a19b78350526a03fc0f09e95d33084, putative proteorhodopsin gene, partial cds. PRGD_OTU242_e5a19b78350526a03fc0f09e95d33084, putative proteorhodopsin gene, partial cds. KJ929781 [[proteorhodopsin super-cluster I/Firmicutes-like cluster]] proteorhodopsin super-cluster I Firmicutes-like cluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATTACTGTTCCTCTGTTGATGGTGGAGTTTTTCTTTGTTCTGCGTGCTACTACTCGTTGCTCCGAGGGAGTCTTTTGGCGTCTTTTCTTGGGATCGTTGGTCATGCTTGTTGGTGGATGGCTTGGCGAGGCGGGAGTATTATCCAAGATGATCGGGTTTGTGATTGGTATGGTTGGCTGGGTCTTTCTGCTCTTTGAAGTCTTCGCCGGGGAGGCGGCTAGCCTGAGTTCCGCGTCCGGAAGTGAGGCTGGCACTCGCTGCTTTAACACACTTCGTGGACTTGTCACCGTG LITVPLLMVEFFFVLRATTRCSEGVFWRLFLGSLVMLVGGWLGEAGVLSKMIGFVIGMVGWVFLLFEVFAGEAASLSSASGSEAGTRCFNTLRGLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTTCCTCTGTTGATGGTGGAGTTTTTCTTTGTTCTGCGTGCT---------ACT---ACTCGTTGCTCCGAG---GGAGTC------------------------------------TTTTGGCGT---CTTTTCTTGGGATCGTTGGTCATGCTTGTTGGTGGATGGCTTGGCGAG---------GCG------------------GGA------GTA---------------------------------TTA------------------------------------------------------------------TCCAAG------------------ATGATCGGG---TTTGTGATTGGTATGGTTGGCTGGGTCTTTCTGCTCTTTGAAGTC---------------TTC------GCC---GGGGAGGCGGCTAGCCTGAGTTCCGCG------TCC---GGAAGTGAGGCTGGC---ACT---CGC---TGC---TTT---AAC---ACACTT---CGTGGACTTGTCACCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMVEFFFVLRA---T-TRCSE-GV------------FWR-LFLGSLVMLVGGWLGE---A------G--V-----------L----------------------SK------MIG-FVIGMVGWVFLLFEV-----F--A-GEAASLSSA--S-GSEAG-T-R-C-F-N-TL-RGLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes]_KJ929838 [I-Firmicutes] PRGD_OTU289_otuREP_cf9e3aa26ba4bfa1d71aa1f3e2327f97 gb|KJ929838| PRGD_OTU289_otuREP_cf9e3aa26ba4bfa1d71aa1f3e2327f97, putative proteorhodopsin gene, partial cds. PRGD_OTU289_otuREP_cf9e3aa26ba4bfa1d71aa1f3e2327f97, putative proteorhodopsin gene, partial cds. KJ929838 [[proteorhodopsin super-cluster I/Firmicutes-like cluster]] proteorhodopsin super-cluster I Firmicutes-like cluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-35.05, 23.73; -33.28, 45.35) CTTATTACAGTCCCCCTTCAAATCGTAGAATTCTATCTCATACTTGCTGCGGTAACCAAAGTTAAGGCAAATCTATTCTGGCAGCTACTAGCGGCCTCTCTAGTCATGCTTGTTTTTGGCTATCTAGGAGAAGCCAACATTCTCAACATATACATAGCTTTCGCTATTGGCATGCTTGGGTGGTTATATGTAATTTATTTGGTCTTCTTCGGAGCCGCAAAAAAAGTAAATGCACAGAGCGGAAACGCCTCCAGTCAAATGGCATTCAATGCAATACGAATGATAGTACTCGTT LITVPLQIVEFYLILAAVTKVKANLFWQLLAASLVMLVFGYLGEANILNIYIAFAIGMLGWLYVIYLVFFGAAKKVNAQSGNASSQMAFNAIRMIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATTACAGTCCCCCTTCAAATCGTAGAATTCTATCTCATACTTGCTGCG---------GTA---ACCAAAGTTAAGGCA---AATCTA------------------------------------TTCTGGCAG---CTACTAGCGGCCTCTCTAGTCATGCTTGTTTTTGGCTATCTAGGAGAA---------GCC------------------AAC------ATT---------------------------------CTC------------------------------------------------------------------AACATA------------------TACATAGCT---TTCGCTATTGGCATGCTTGGGTGGTTATATGTAATTTATTTGGTC---------------TTC------TTC---GGAGCCGCAAAAAAAGTAAATGCACAG------AGC---GGAAACGCCTCCAGT---CAA---ATG---GCA---TTC---AAT---GCAATA---CGAATGATAGTACTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TKVKA-NL------------FWQ-LLAASLVMLVFGYLGE---A------N--I-----------L----------------------NI------YIA-FAIGMLGWLYVIYLV-----F--F-GAAKKVNAQ--S-GNASS-Q-M-A-F-N-AI-RMIVLV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927853 [I-Firmicutes-a] PRGD_OTU018_9260cae39ce2136fb965afb73b8646b0 gb|KJ927853| PRGD_OTU018_9260cae39ce2136fb965afb73b8646b0, putative proteorhodopsin gene, partial cds. PRGD_OTU018_9260cae39ce2136fb965afb73b8646b0, putative proteorhodopsin gene, partial cds. KJ927853 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATAACCGTACCACTGCAAATTGTTGAATTCTATTTGATATTAGCCGCTGTGACTGCAGTCCGAACCGGACTCTTTTGGCAACTTCTTGGGGCATCAGTTGTAATGCTCCTAGGCGGTTATTTAGGCGAAACGGCAGTGATCAGCCCTACGATCGGATTCGTAGTGGGCATGGCCGGGTGGATTTACATCATCTATTTGATTTTTGCCGGAGAGGCTAATCAAGTCTCCGAAGGATCGGGAAATGCAGCAAGTCAGAGCGCTTTTAAAACGCTGCGACTTATTGTTACAGTG LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSEGSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTACCACTGCAAATTGTTGAATTCTATTTGATATTAGCCGCT---------GTG---ACTGCAGTCCGAACC---GGACTC------------------------------------TTTTGGCAA---CTTCTTGGGGCATCAGTTGTAATGCTCCTAGGCGGTTATTTAGGCGAA---------ACG------------------GCA------GTG---------------------------------ATC------------------------------------------------------------------AGCCCT------------------ACGATCGGA---TTCGTAGTGGGCATGGCCGGGTGGATTTACATCATCTATTTGATT---------------TTT------GCC---GGAGAGGCTAATCAAGTCTCCGAAGGA------TCG---GGAAATGCAGCAAGT---CAG---AGC---GCT---TTT---AAA---ACGCTG---CGACTTATTGTTACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSEG--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927876 [I-Firmicutes-a] PRGD_OTU018_dff8e27dd390bdd9515b99b7f648dad7 gb|KJ927876| PRGD_OTU018_dff8e27dd390bdd9515b99b7f648dad7, putative proteorhodopsin gene, partial cds. PRGD_OTU018_dff8e27dd390bdd9515b99b7f648dad7, putative proteorhodopsin gene, partial cds. KJ927876 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (33.762, 29.175), Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTGATAACCGTACCACTACAAATTGTTGAATTCTATTTGATATTAGCCGCTGTGACTGCAGTCCGAACCGGACTCTTTTGGCAGCTTCTTGGGGCATCAGTTGTAATGCTGCTAGGCGGTTATTTAGGCGAAACGGCAGTGATCAGCCCTACGATCGGATTCGTAGTGGGCATGGCCGGGTGGATTTACATCATCTATTTGATTTTTGCCGGAGAGGCTAATCAAGTCTCCGAAGGATCGGGTAATGCAGCAAGTCAGAGCGCTTTTAAAACGCTGCGACTTATTGTTACAGTG LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSEGSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTACCACTACAAATTGTTGAATTCTATTTGATATTAGCCGCT---------GTG---ACTGCAGTCCGAACC---GGACTC------------------------------------TTTTGGCAG---CTTCTTGGGGCATCAGTTGTAATGCTGCTAGGCGGTTATTTAGGCGAA---------ACG------------------GCA------GTG---------------------------------ATC------------------------------------------------------------------AGCCCT------------------ACGATCGGA---TTCGTAGTGGGCATGGCCGGGTGGATTTACATCATCTATTTGATT---------------TTT------GCC---GGAGAGGCTAATCAAGTCTCCGAAGGA------TCG---GGTAATGCAGCAAGT---CAG---AGC---GCT---TTT---AAA---ACGCTG---CGACTTATTGTTACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSEG--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927857 [I-Firmicutes-a] PRGD_OTU018_a4e287c9091c537971bdab942d8daf07 gb|KJ927857| PRGD_OTU018_a4e287c9091c537971bdab942d8daf07, putative proteorhodopsin gene, partial cds. PRGD_OTU018_a4e287c9091c537971bdab942d8daf07, putative proteorhodopsin gene, partial cds. KJ927857 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATAACCGTACCATTACAGATTGTTGAATTCTATTTGATATTAGCCGCTGTGACCGCAGTCCGAACCGGACTCTTTTGGCAGCTTCTTGGGGCATCAGTTGTAATGCTCCTAGGCGGTTATTTAGGCGAAACGGCAGTGATTAGCCCTACGATCGGATTCGTAGTGGGCATGGCCGGGTGGATTTACATCATCTATCTGATTTTTGCCGGAGAGGCTAATCAAGTCTCCGAAGGTTCGGGTAATGCAGCAAGTCAGAGCGCTTTTAAAACGCTGCGACTTATTGTTACAGTG LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSEGSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTACCATTACAGATTGTTGAATTCTATTTGATATTAGCCGCT---------GTG---ACCGCAGTCCGAACC---GGACTC------------------------------------TTTTGGCAG---CTTCTTGGGGCATCAGTTGTAATGCTCCTAGGCGGTTATTTAGGCGAA---------ACG------------------GCA------GTG---------------------------------ATT------------------------------------------------------------------AGCCCT------------------ACGATCGGA---TTCGTAGTGGGCATGGCCGGGTGGATTTACATCATCTATCTGATT---------------TTT------GCC---GGAGAGGCTAATCAAGTCTCCGAAGGT------TCG---GGTAATGCAGCAAGT---CAG---AGC---GCT---TTT---AAA---ACGCTG---CGACTTATTGTTACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSEG--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927851 [I-Firmicutes-a] PRGD_OTU018_74956f3d5a2308c6b5f2f52ddd81c162 gb|KJ927851| PRGD_OTU018_74956f3d5a2308c6b5f2f52ddd81c162, putative proteorhodopsin gene, partial cds. PRGD_OTU018_74956f3d5a2308c6b5f2f52ddd81c162, putative proteorhodopsin gene, partial cds. KJ927851 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTGATAACCGTACCATTACAGATTGTTGAATTTTATTTGATATTAGCCGCTGTGACTGCAGTCCGAACCGGACTCTTTTGGCAGCTTCTTGGGGCATCAGTTGTAATGCTCCTCGGCGGTTATTTAGGCGAAACGGCAGTGATCAGCCCTACGATCGGATTCGTAGTGGGCATGGCCGGGTGGATTTACATAATCTATTTAATTTTTGCCGGAGAGGCTAATCAGGTCTCCGAAGGTTCGGGTAATGCAGCAAGTCAGAGCGCTTTTAAAACGCTGCGACTTATTGTTACAGTG LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSEGSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTACCATTACAGATTGTTGAATTTTATTTGATATTAGCCGCT---------GTG---ACTGCAGTCCGAACC---GGACTC------------------------------------TTTTGGCAG---CTTCTTGGGGCATCAGTTGTAATGCTCCTCGGCGGTTATTTAGGCGAA---------ACG------------------GCA------GTG---------------------------------ATC------------------------------------------------------------------AGCCCT------------------ACGATCGGA---TTCGTAGTGGGCATGGCCGGGTGGATTTACATAATCTATTTAATT---------------TTT------GCC---GGAGAGGCTAATCAGGTCTCCGAAGGT------TCG---GGTAATGCAGCAAGT---CAG---AGC---GCT---TTT---AAA---ACGCTG---CGACTTATTGTTACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSEG--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927872 [I-Firmicutes-a] PRGD_OTU018_c95de6a5f2944a0a0cfcf347d684f48b gb|KJ927872| PRGD_OTU018_c95de6a5f2944a0a0cfcf347d684f48b, putative proteorhodopsin gene, partial cds. PRGD_OTU018_c95de6a5f2944a0a0cfcf347d684f48b, putative proteorhodopsin gene, partial cds. KJ927872 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTGATAACCGTACCATTACAGATTGTTGAATTCTATTTGATATTAGCCGCTGTGACCGCAGTCCGAACCGGACTCTTTTGGCAGCTTCTTGGGGCATCAGTTGTAATGCTCCTAGGCGGTTATTTAGGCGAAACGGCAGTGATTAGCCCTACGATCGGATTCGTAGTGGGCATGGCCGGGTGGATTTATATAATCTACTTAATTTTTGCCGGAGAGGCTAACCAAGTCTCCGAAGGTTCGGGGAATGCAGCAAGTCAGAGCGCTTTTAAAACGCTGCGACTTATTGTTACAGTG LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSEGSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTACCATTACAGATTGTTGAATTCTATTTGATATTAGCCGCT---------GTG---ACCGCAGTCCGAACC---GGACTC------------------------------------TTTTGGCAG---CTTCTTGGGGCATCAGTTGTAATGCTCCTAGGCGGTTATTTAGGCGAA---------ACG------------------GCA------GTG---------------------------------ATT------------------------------------------------------------------AGCCCT------------------ACGATCGGA---TTCGTAGTGGGCATGGCCGGGTGGATTTATATAATCTACTTAATT---------------TTT------GCC---GGAGAGGCTAACCAAGTCTCCGAAGGT------TCG---GGGAATGCAGCAAGT---CAG---AGC---GCT---TTT---AAA---ACGCTG---CGACTTATTGTTACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSEG--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927845 [I-Firmicutes-a] PRGD_OTU018_5813c7841a20cc7a179d7eb19d307262 gb|KJ927845| PRGD_OTU018_5813c7841a20cc7a179d7eb19d307262, putative proteorhodopsin gene, partial cds. PRGD_OTU018_5813c7841a20cc7a179d7eb19d307262, putative proteorhodopsin gene, partial cds. KJ927845 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATAACCGTACCATTACAAATTGTTGAATTCTATCTGATATTAGCCGCTGTGACTGCAGTCAGAACCGGACTCTTTTGGCAGCTTCTTGGGGCATCAGTTGTAATGCTCCTAGGCGGTTATTTAGGCGAAACGGCAGTGATCAGCCCTACGATCGGTTTCGTAGTGGGCATGGCCGGGTGGATTTACATCATATATTTAATTTTCGCCGGAGAGGCTAATCAAGTCTCCGAGGGTTCGGGTAATGCAGCAAGTCAGAGCGCTTTTAAAACGCTGCGACTTATTGTTACTGTG LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSEGSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTACCATTACAAATTGTTGAATTCTATCTGATATTAGCCGCT---------GTG---ACTGCAGTCAGAACC---GGACTC------------------------------------TTTTGGCAG---CTTCTTGGGGCATCAGTTGTAATGCTCCTAGGCGGTTATTTAGGCGAA---------ACG------------------GCA------GTG---------------------------------ATC------------------------------------------------------------------AGCCCT------------------ACGATCGGT---TTCGTAGTGGGCATGGCCGGGTGGATTTACATCATATATTTAATT---------------TTC------GCC---GGAGAGGCTAATCAAGTCTCCGAGGGT------TCG---GGTAATGCAGCAAGT---CAG---AGC---GCT---TTT---AAA---ACGCTG---CGACTTATTGTTACTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSEG--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927880 [I-Firmicutes-a] PRGD_OTU018_fc575ddb2b05baa17f9ea005989043b2 gb|KJ927880| PRGD_OTU018_fc575ddb2b05baa17f9ea005989043b2, putative proteorhodopsin gene, partial cds. PRGD_OTU018_fc575ddb2b05baa17f9ea005989043b2, putative proteorhodopsin gene, partial cds. KJ927880 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) CTGATAACCGTACCATTACAAATTGTTGAATTCTATCTGATATTAGCCGCTGTGACTGCAGTCCGAACCGGACTCTTTTGGCAGCTTCTTGGGGCATCAGTTGTAATGCTCCTAGGCGGTTATCTAGGCGAAACGGCAGTGATCAGCCCTACGATCGGATTCGTAGTGGGCATGGCCGGGTGGATTTACATCATCTATTTAATTTTCGCCGGAGAGGCTAATCAAGTCTCCGAAGGTTCGGGTAATGCAGCAAGTCAGAGCGCTTTTAAAACGCTGCGACTTATTGTTACTGTG LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSEGSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTACCATTACAAATTGTTGAATTCTATCTGATATTAGCCGCT---------GTG---ACTGCAGTCCGAACC---GGACTC------------------------------------TTTTGGCAG---CTTCTTGGGGCATCAGTTGTAATGCTCCTAGGCGGTTATCTAGGCGAA---------ACG------------------GCA------GTG---------------------------------ATC------------------------------------------------------------------AGCCCT------------------ACGATCGGA---TTCGTAGTGGGCATGGCCGGGTGGATTTACATCATCTATTTAATT---------------TTC------GCC---GGAGAGGCTAATCAAGTCTCCGAAGGT------TCG---GGTAATGCAGCAAGT---CAG---AGC---GCT---TTT---AAA---ACGCTG---CGACTTATTGTTACTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSEG--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927874 [I-Firmicutes-a] PRGD_OTU018_cf77c8123521a58be476caef39ade0b7 gb|KJ927874| PRGD_OTU018_cf77c8123521a58be476caef39ade0b7, putative proteorhodopsin gene, partial cds. PRGD_OTU018_cf77c8123521a58be476caef39ade0b7, putative proteorhodopsin gene, partial cds. KJ927874 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), Indian Ocean (-35.05, 23.73; -33.28, 45.35) CTGATAACCGTACCATTACAAATTGTTGAATTCTATCTGATATTAGCCGCTGTGACTGCAGTCCGAACCGGACTCTTTTGGCAGCTTCTTGGGGCATCAGTTGTAATGCTCTTAGGCGGTTATTTAGGCGAAACGGCAGTGATAAGCCCTACGATCGGATTCGTAGTGGGCATGGCCGGGTGGATTTACATCATCTATTTAATTTTCGCCGGAGAGGCTAATCAAGTCTCCGAAGGTTCGGGTAATGCAGCAAGTCAGAGCGCTTTTAAAACGCTGCGACTTATTGTTACTGTG LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSEGSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTACCATTACAAATTGTTGAATTCTATCTGATATTAGCCGCT---------GTG---ACTGCAGTCCGAACC---GGACTC------------------------------------TTTTGGCAG---CTTCTTGGGGCATCAGTTGTAATGCTCTTAGGCGGTTATTTAGGCGAA---------ACG------------------GCA------GTG---------------------------------ATA------------------------------------------------------------------AGCCCT------------------ACGATCGGA---TTCGTAGTGGGCATGGCCGGGTGGATTTACATCATCTATTTAATT---------------TTC------GCC---GGAGAGGCTAATCAAGTCTCCGAAGGT------TCG---GGTAATGCAGCAAGT---CAG---AGC---GCT---TTT---AAA---ACGCTG---CGACTTATTGTTACTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSEG--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927877 [I-Firmicutes-a] PRGD_OTU018_e43c53952aea94db361aa2eff2820397 gb|KJ927877| PRGD_OTU018_e43c53952aea94db361aa2eff2820397, putative proteorhodopsin gene, partial cds. PRGD_OTU018_e43c53952aea94db361aa2eff2820397, putative proteorhodopsin gene, partial cds. KJ927877 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTGATAACCGTACCATTACAAATTGTTGAATTCTATCTGATATTAGCCGCTGTGACTGCAGTCCGAACCGGACTCTTTTGGCAGCTTCTTGGGGCATCAGTTGTAATGCTCCTAGGCGGTTATTTAGGCGAAACGGCAGTAATCAGCCCTACGATCGGATTCGTAGTGGGCATGGCCGGGTGGATTTACATCATCTATTTAATTTTCGCCGGAGAGGCTAATCAAGTCTCCGAAGGTTCGGGTAATGCAGCAAGTCAGAGCGCTTTTAAAACGCTGCGACTTATTGTTACAGTG LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSEGSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTACCATTACAAATTGTTGAATTCTATCTGATATTAGCCGCT---------GTG---ACTGCAGTCCGAACC---GGACTC------------------------------------TTTTGGCAG---CTTCTTGGGGCATCAGTTGTAATGCTCCTAGGCGGTTATTTAGGCGAA---------ACG------------------GCA------GTA---------------------------------ATC------------------------------------------------------------------AGCCCT------------------ACGATCGGA---TTCGTAGTGGGCATGGCCGGGTGGATTTACATCATCTATTTAATT---------------TTC------GCC---GGAGAGGCTAATCAAGTCTCCGAAGGT------TCG---GGTAATGCAGCAAGT---CAG---AGC---GCT---TTT---AAA---ACGCTG---CGACTTATTGTTACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSEG--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927836 [I-Firmicutes-a] PRGD_OTU018_05750e578ffd894906fc1abb425f885e gb|KJ927836| PRGD_OTU018_05750e578ffd894906fc1abb425f885e, putative proteorhodopsin gene, partial cds. PRGD_OTU018_05750e578ffd894906fc1abb425f885e, putative proteorhodopsin gene, partial cds. KJ927836 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTGATAACCGTACCATTACAAATTGTTGAATTCTATTTGATATTAGCCGCTGTGACTGCAGTCCGAACTGGACTCTTTTGGCAGCTTCTTGGGGCATCAGTTGTAATGCTCCTAGGCGGTTATTTAGGCGAAACGGCAGTGATCAGCCCTACGATCGGATTCGTAGTGGGCATGGCCGGGTGGATTTATATCATCTATTTAATCTTTGCCGGAGAGGCTAATCAAGTCTCCGAAAGTTCGGGTAATGCAGCAAGTCAGAGCGCTTTTAAAACGCTGCGGCTTATTGTTACAGTG LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSESSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTACCATTACAAATTGTTGAATTCTATTTGATATTAGCCGCT---------GTG---ACTGCAGTCCGAACT---GGACTC------------------------------------TTTTGGCAG---CTTCTTGGGGCATCAGTTGTAATGCTCCTAGGCGGTTATTTAGGCGAA---------ACG------------------GCA------GTG---------------------------------ATC------------------------------------------------------------------AGCCCT------------------ACGATCGGA---TTCGTAGTGGGCATGGCCGGGTGGATTTATATCATCTATTTAATC---------------TTT------GCC---GGAGAGGCTAATCAAGTCTCCGAAAGT------TCG---GGTAATGCAGCAAGT---CAG---AGC---GCT---TTT---AAA---ACGCTG---CGGCTTATTGTTACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSES--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927878 [I-Firmicutes-a] PRGD_OTU018_f536e19f87eb0e2fd017172d3663a3c0 gb|KJ927878| PRGD_OTU018_f536e19f87eb0e2fd017172d3663a3c0, putative proteorhodopsin gene, partial cds. PRGD_OTU018_f536e19f87eb0e2fd017172d3663a3c0, putative proteorhodopsin gene, partial cds. KJ927878 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), Indian Ocean (-35.05, 23.73) CTGATAACCGTACCATTACAAATTGTTGAATTCTATTTGATACTAGCCGCTGTGACTGCAGTCCGAACCGGACTCTTTTGGCAGCTTCTTGGGGCATCAGTTGTAATGCTCCTAGGCGGTTATTTAGGCGAAACGGCAGTGATCAGTCCTACGATCGGATTCGTAGTGGGCATGGCCGGGTGGATTTACATCATCTATTTAATTTTTGCCGGAGAGGCTAATCAAGTCTCCGAAGGTTCGGGAAATGCTGCAAGTCAGAGCGCTTTTAAAACGCTGCGACTTATTGTTACAGTG LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSEGSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTACCATTACAAATTGTTGAATTCTATTTGATACTAGCCGCT---------GTG---ACTGCAGTCCGAACC---GGACTC------------------------------------TTTTGGCAG---CTTCTTGGGGCATCAGTTGTAATGCTCCTAGGCGGTTATTTAGGCGAA---------ACG------------------GCA------GTG---------------------------------ATC------------------------------------------------------------------AGTCCT------------------ACGATCGGA---TTCGTAGTGGGCATGGCCGGGTGGATTTACATCATCTATTTAATT---------------TTT------GCC---GGAGAGGCTAATCAAGTCTCCGAAGGT------TCG---GGAAATGCTGCAAGT---CAG---AGC---GCT---TTT---AAA---ACGCTG---CGACTTATTGTTACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSEG--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927837 [I-Firmicutes-a] PRGD_OTU018_065dcd97513c9cc7936d4270093345de gb|KJ927837| PRGD_OTU018_065dcd97513c9cc7936d4270093345de, putative proteorhodopsin gene, partial cds. PRGD_OTU018_065dcd97513c9cc7936d4270093345de, putative proteorhodopsin gene, partial cds. KJ927837 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATAACCGTACCATTACAAATTGTTGAATTCTATCTGATACTTGCCGCTGTGACTGCAGTCCGAACAGGACTCTTTTGGCAGCTTCTCGGGGCATCAGTTGTAATGCTCCTAGGCGGTTATTTAGGCGAAACGGCAGTGATCAGCCCTACGATCGGATTCGTAGTGGGCATGGCCGGATGGCTTTACATCATCTATTTAATTTTTGCCGGAGAGGCTAATCAAGTCTCCGAAGGTTCGGGTAATGCTGCAAGTCAGAGCGCTTTTAAAACGCTGCGACTTATTGTTACAGTG LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWLYIIYLIFAGEANQVSEGSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTACCATTACAAATTGTTGAATTCTATCTGATACTTGCCGCT---------GTG---ACTGCAGTCCGAACA---GGACTC------------------------------------TTTTGGCAG---CTTCTCGGGGCATCAGTTGTAATGCTCCTAGGCGGTTATTTAGGCGAA---------ACG------------------GCA------GTG---------------------------------ATC------------------------------------------------------------------AGCCCT------------------ACGATCGGA---TTCGTAGTGGGCATGGCCGGATGGCTTTACATCATCTATTTAATT---------------TTT------GCC---GGAGAGGCTAATCAAGTCTCCGAAGGT------TCG---GGTAATGCTGCAAGT---CAG---AGC---GCT---TTT---AAA---ACGCTG---CGACTTATTGTTACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWLYIIYLI-----F--A-GEANQVSEG--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927847 [I-Firmicutes-a] PRGD_OTU018_684632920dc4d5a570821a3c4d59788a gb|KJ927847| PRGD_OTU018_684632920dc4d5a570821a3c4d59788a, putative proteorhodopsin gene, partial cds. PRGD_OTU018_684632920dc4d5a570821a3c4d59788a, putative proteorhodopsin gene, partial cds. KJ927847 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTGATAACCGTACCATTACAAATTGTTGAATTCTATTTGATACTAGCCGCTGTGACTGCAGTCCGAACCGGACTCTTTTGGCAGCTCCTTGGGGCATCAGTTGTAATGCTCCTAGGCGGTTATTTAGGCGAAACGGCAGTGATCAGCCCTACGATCGGATTCGTAGTGGGCATGGCCGGATGGCTTTACATCATCTATTTAATTTTTGCCGGAGAGGCTAATCAAGTCTCCGAAGGTTCGGGTAATGCTGCAAGTCAGAGCGCTTTTAAAACGCTGCGACTTATTGTTACAGTG LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWLYIIYLIFAGEANQVSEGSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTACCATTACAAATTGTTGAATTCTATTTGATACTAGCCGCT---------GTG---ACTGCAGTCCGAACC---GGACTC------------------------------------TTTTGGCAG---CTCCTTGGGGCATCAGTTGTAATGCTCCTAGGCGGTTATTTAGGCGAA---------ACG------------------GCA------GTG---------------------------------ATC------------------------------------------------------------------AGCCCT------------------ACGATCGGA---TTCGTAGTGGGCATGGCCGGATGGCTTTACATCATCTATTTAATT---------------TTT------GCC---GGAGAGGCTAATCAAGTCTCCGAAGGT------TCG---GGTAATGCTGCAAGT---CAG---AGC---GCT---TTT---AAA---ACGCTG---CGACTTATTGTTACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWLYIIYLI-----F--A-GEANQVSEG--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927854 [I-Firmicutes-a] PRGD_OTU018_94df56cfccb95ca5cddf787f67b2e205 gb|KJ927854| PRGD_OTU018_94df56cfccb95ca5cddf787f67b2e205, putative proteorhodopsin gene, partial cds. PRGD_OTU018_94df56cfccb95ca5cddf787f67b2e205, putative proteorhodopsin gene, partial cds. KJ927854 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTGATAACCGTACCATTACAAATTGTTGAATTCTATTTGATACTAGCCGCTGTGACTGCAGTCCGAACCGGACTCTTTTGGCAGCTCCTCGGGGCATCAGTTGTAATGCTCCTAGGCGGCTATTTAGGCGAAACGGCAGTGATCAGCCCTACGATCGGATTCGTAGTGGGCATGGCCGGGTGGATTTACATCATCTATTTAATTTTTGCCGGAGAGGCTAATCAAGTCTCCGAGGGTTCGGGTAATGCTGCAAGTCAGAGCGCTTTTAAAACGCTGCGACTTATTGTTACAGTG LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSEGSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTACCATTACAAATTGTTGAATTCTATTTGATACTAGCCGCT---------GTG---ACTGCAGTCCGAACC---GGACTC------------------------------------TTTTGGCAG---CTCCTCGGGGCATCAGTTGTAATGCTCCTAGGCGGCTATTTAGGCGAA---------ACG------------------GCA------GTG---------------------------------ATC------------------------------------------------------------------AGCCCT------------------ACGATCGGA---TTCGTAGTGGGCATGGCCGGGTGGATTTACATCATCTATTTAATT---------------TTT------GCC---GGAGAGGCTAATCAAGTCTCCGAGGGT------TCG---GGTAATGCTGCAAGT---CAG---AGC---GCT---TTT---AAA---ACGCTG---CGACTTATTGTTACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSEG--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927852 [I-Firmicutes-a] PRGD_OTU018_83fc938b39bde0fd39a0308d9817bf1d gb|KJ927852| PRGD_OTU018_83fc938b39bde0fd39a0308d9817bf1d, putative proteorhodopsin gene, partial cds. PRGD_OTU018_83fc938b39bde0fd39a0308d9817bf1d, putative proteorhodopsin gene, partial cds. KJ927852 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTGATAACCGTACCATTACAAATTGTTGAATTCTATCTGATACTTGCCGCTGTGACTGCAGTCCGAACAGGACTCTTTTGGCAGCTTCTCGGGGCATCAGTTGTAATGCTCCTGGGTGGATATTTAGGCGAAACGGCAGTTATCAGTCCAACAATTGGGTTCGTAGTGGGCATGGCCGGGTGGATTTACATCATCTATTTAATTTTCGCCGGAGAGGCTAATCAAGTCTCCGAAGGTTCGGGTAATGCAGCAAGTCAGAGCGCTTTTAAAACGCTGCGACTTATTGTAACAGTG LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSEGSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTACCATTACAAATTGTTGAATTCTATCTGATACTTGCCGCT---------GTG---ACTGCAGTCCGAACA---GGACTC------------------------------------TTTTGGCAG---CTTCTCGGGGCATCAGTTGTAATGCTCCTGGGTGGATATTTAGGCGAA---------ACG------------------GCA------GTT---------------------------------ATC------------------------------------------------------------------AGTCCA------------------ACAATTGGG---TTCGTAGTGGGCATGGCCGGGTGGATTTACATCATCTATTTAATT---------------TTC------GCC---GGAGAGGCTAATCAAGTCTCCGAAGGT------TCG---GGTAATGCAGCAAGT---CAG---AGC---GCT---TTT---AAA---ACGCTG---CGACTTATTGTAACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSEG--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927866 [I-Firmicutes-a] PRGD_OTU018_bdd0aec884ecf3879408481ea975e46a gb|KJ927866| PRGD_OTU018_bdd0aec884ecf3879408481ea975e46a, putative proteorhodopsin gene, partial cds. PRGD_OTU018_bdd0aec884ecf3879408481ea975e46a, putative proteorhodopsin gene, partial cds. KJ927866 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -33.28, 45.35) CTGATAACCGTACCATTACAAATTGTTGAATTCTATCTGATACTTGCCGCTGTGACTGCAGTCCGAACAGGACTCTTTTGGCAGCTTCTCGGGGCATCAGTTGTAATGCTCCTGGGTGGATATTTAGGCGAAACGGCAGTTATCAGTCCTACAATCGGGTTCGTAGTGGGCATGGCCGGGTGGATTTACATCATCTATTTAATTTTTGCCGGAGAGGCTAATCAAGTCTCCGAAGGTTCGGGTAATGCAGCAAGTCAGAGCGCTTTTAAAACGCTGCGACTTATTGTAACAGTG LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSEGSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTACCATTACAAATTGTTGAATTCTATCTGATACTTGCCGCT---------GTG---ACTGCAGTCCGAACA---GGACTC------------------------------------TTTTGGCAG---CTTCTCGGGGCATCAGTTGTAATGCTCCTGGGTGGATATTTAGGCGAA---------ACG------------------GCA------GTT---------------------------------ATC------------------------------------------------------------------AGTCCT------------------ACAATCGGG---TTCGTAGTGGGCATGGCCGGGTGGATTTACATCATCTATTTAATT---------------TTT------GCC---GGAGAGGCTAATCAAGTCTCCGAAGGT------TCG---GGTAATGCAGCAAGT---CAG---AGC---GCT---TTT---AAA---ACGCTG---CGACTTATTGTAACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSEG--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927869 [I-Firmicutes-a] PRGD_OTU018_c4d3c8de8aaaded2f44f68cc78184b97 gb|KJ927869| PRGD_OTU018_c4d3c8de8aaaded2f44f68cc78184b97, putative proteorhodopsin gene, partial cds. PRGD_OTU018_c4d3c8de8aaaded2f44f68cc78184b97, putative proteorhodopsin gene, partial cds. KJ927869 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATAACCGTACCATTACAAATTGTTGAATTCTATCTGATACTTGCCGCTGTGACTGCAGTCCGAACAGGACTCTTTTGGCAGCTTCTCGGGGCATCAGTTGTAATGCTCCTAGGTGGATATCTAGGCGAAACGGCAGTTATCAGTCCAACAATTGGGTTCGTAGTGGGCATGGCAGGGTGGATTTATATCATCTATTTAATTTTTGCCGGAGAGGCTAATCAAGTCTCCGAAGGTTCGGGTAATGCTGCAAGTCAGAGCGCTTTTAAAACGCTGCGACTTATTGTTACAGTG LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSEGSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTACCATTACAAATTGTTGAATTCTATCTGATACTTGCCGCT---------GTG---ACTGCAGTCCGAACA---GGACTC------------------------------------TTTTGGCAG---CTTCTCGGGGCATCAGTTGTAATGCTCCTAGGTGGATATCTAGGCGAA---------ACG------------------GCA------GTT---------------------------------ATC------------------------------------------------------------------AGTCCA------------------ACAATTGGG---TTCGTAGTGGGCATGGCAGGGTGGATTTATATCATCTATTTAATT---------------TTT------GCC---GGAGAGGCTAATCAAGTCTCCGAAGGT------TCG---GGTAATGCTGCAAGT---CAG---AGC---GCT---TTT---AAA---ACGCTG---CGACTTATTGTTACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSEG--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927861 [I-Firmicutes-a] PRGD_OTU018_ac97a7cf21ff4881afc3b4fde3c10ce0 gb|KJ927861| PRGD_OTU018_ac97a7cf21ff4881afc3b4fde3c10ce0, putative proteorhodopsin gene, partial cds. PRGD_OTU018_ac97a7cf21ff4881afc3b4fde3c10ce0, putative proteorhodopsin gene, partial cds. KJ927861 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATAACCGTACCATTACAAATTGTTGAATTCTATTTGATATTAGCCGCTGTGACTGCAGTCCGAACCGGACTCTTTTGGCAGCTTCTCGGGGCATCAGTTGTAATGCTCCTAGGTGGCTATTTGGGCGAAACGGCAGTGATTAGCCCTACAATCGGGTTTGTAGTGGGCATGGCCGGATGGATTTACATCATCTATCTGATTTTTGCCGGAGAGGCTAATCAAGTCTCAGAAGGTTCGGGTAATGCAGCAAGTCAGAGCGCTTTTAAAACGCTGCGACTTATTGTGACAGTG LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSEGSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTACCATTACAAATTGTTGAATTCTATTTGATATTAGCCGCT---------GTG---ACTGCAGTCCGAACC---GGACTC------------------------------------TTTTGGCAG---CTTCTCGGGGCATCAGTTGTAATGCTCCTAGGTGGCTATTTGGGCGAA---------ACG------------------GCA------GTG---------------------------------ATT------------------------------------------------------------------AGCCCT------------------ACAATCGGG---TTTGTAGTGGGCATGGCCGGATGGATTTACATCATCTATCTGATT---------------TTT------GCC---GGAGAGGCTAATCAAGTCTCAGAAGGT------TCG---GGTAATGCAGCAAGT---CAG---AGC---GCT---TTT---AAA---ACGCTG---CGACTTATTGTGACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSEG--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927860 [I-Firmicutes-a] PRGD_OTU018_ab429aa307114b3ced02d831599879de gb|KJ927860| PRGD_OTU018_ab429aa307114b3ced02d831599879de, putative proteorhodopsin gene, partial cds. PRGD_OTU018_ab429aa307114b3ced02d831599879de, putative proteorhodopsin gene, partial cds. KJ927860 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -33.28, 45.35) CTGATAACCGTACCATTACAAATTGTTGAATTCTATTTGATATTAGCCGCTGTGACTGCAGTCCGAACCGGACTCTTTTGGCAGCTTCTAGGGGCATCAGTTGTAATGCTCCTAGGCGGTTATTTAGGCGAAACGGCAGTGATCAGCCCTACAATCGGGTTCGTAGTGGGCATGGCCGGGTGGATTTATATTATCTACCTAATCTTTGCCGGAGAGGCTAATCAGGTCTCCGAAGGGTCGGGTAATGCAGCAAGTCAGAGCGCTTTTAAAACGCTGCGACTCATTGTGACAGTG LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSEGSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTACCATTACAAATTGTTGAATTCTATTTGATATTAGCCGCT---------GTG---ACTGCAGTCCGAACC---GGACTC------------------------------------TTTTGGCAG---CTTCTAGGGGCATCAGTTGTAATGCTCCTAGGCGGTTATTTAGGCGAA---------ACG------------------GCA------GTG---------------------------------ATC------------------------------------------------------------------AGCCCT------------------ACAATCGGG---TTCGTAGTGGGCATGGCCGGGTGGATTTATATTATCTACCTAATC---------------TTT------GCC---GGAGAGGCTAATCAGGTCTCCGAAGGG------TCG---GGTAATGCAGCAAGT---CAG---AGC---GCT---TTT---AAA---ACGCTG---CGACTCATTGTGACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSEG--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927863 [I-Firmicutes-a] PRGD_OTU018_b5f2bbb13c4988228dd0e9355f667d06 gb|KJ927863| PRGD_OTU018_b5f2bbb13c4988228dd0e9355f667d06, putative proteorhodopsin gene, partial cds. PRGD_OTU018_b5f2bbb13c4988228dd0e9355f667d06, putative proteorhodopsin gene, partial cds. KJ927863 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTGATAACCGTACCGTTACAAATTGTTGAATTCTATTTGATATTAGCCGCTGTGACTGCAGTCCGAACCGGACTCTTTTGGCAGCTTCTCGGGGCATCAGTTGTAATGCTCCTAGGCGGTTATTTAGGCGAAACGGCAGTGATCAGCCCTACAATCGGGTTCGTAGTGGGCATGGCCGGGTGGATTTATATTATCTACCTAATTTTTGCCGGAGAGGCTAATCAAGTCTCCGAAGGTTCGGGTAACGCAGCAAGTCAGAGCGCTTTTAAAACGCTGCGACTTATTGTGACAGTG LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSEGSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTACCGTTACAAATTGTTGAATTCTATTTGATATTAGCCGCT---------GTG---ACTGCAGTCCGAACC---GGACTC------------------------------------TTTTGGCAG---CTTCTCGGGGCATCAGTTGTAATGCTCCTAGGCGGTTATTTAGGCGAA---------ACG------------------GCA------GTG---------------------------------ATC------------------------------------------------------------------AGCCCT------------------ACAATCGGG---TTCGTAGTGGGCATGGCCGGGTGGATTTATATTATCTACCTAATT---------------TTT------GCC---GGAGAGGCTAATCAAGTCTCCGAAGGT------TCG---GGTAACGCAGCAAGT---CAG---AGC---GCT---TTT---AAA---ACGCTG---CGACTTATTGTGACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSEG--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927879 [I-Firmicutes-a] PRGD_OTU018_f98fca9d5f6fb5ddd1c4fc96cc7560a7 gb|KJ927879| PRGD_OTU018_f98fca9d5f6fb5ddd1c4fc96cc7560a7, putative proteorhodopsin gene, partial cds. PRGD_OTU018_f98fca9d5f6fb5ddd1c4fc96cc7560a7, putative proteorhodopsin gene, partial cds. KJ927879 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) CTGATAACCGTACCATTACAAATTGTTGAATTCTATTTAATATTAGCCGCTGTGACTGCAGTCCGAACCGGACTCTTTTGGCAGCTTCTCGGGGCATCAGTTGTAATGCTCCTAGGCGGATATTTAGGCGAAACGGCAGTGATCAGCCCAACAATCGGGTTCGTAGTGGGCATGGCCGGGTGGATTTATATTATCTACCTCATTTTTGCCGGAGAGGCTAATCAAGTCTCCGAAGGTTCGGGTAATGCAGCAAGTCAGAGCGCTTTTAAAACGCTGCGACTTATTGTGACAGTG LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSEGSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTACCATTACAAATTGTTGAATTCTATTTAATATTAGCCGCT---------GTG---ACTGCAGTCCGAACC---GGACTC------------------------------------TTTTGGCAG---CTTCTCGGGGCATCAGTTGTAATGCTCCTAGGCGGATATTTAGGCGAA---------ACG------------------GCA------GTG---------------------------------ATC------------------------------------------------------------------AGCCCA------------------ACAATCGGG---TTCGTAGTGGGCATGGCCGGGTGGATTTATATTATCTACCTCATT---------------TTT------GCC---GGAGAGGCTAATCAAGTCTCCGAAGGT------TCG---GGTAATGCAGCAAGT---CAG---AGC---GCT---TTT---AAA---ACGCTG---CGACTTATTGTGACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSEG--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927862 [I-Firmicutes-a] PRGD_OTU018_b2fb52206f87fd4264b7ecf285c680e4 gb|KJ927862| PRGD_OTU018_b2fb52206f87fd4264b7ecf285c680e4, putative proteorhodopsin gene, partial cds. PRGD_OTU018_b2fb52206f87fd4264b7ecf285c680e4, putative proteorhodopsin gene, partial cds. KJ927862 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTGATAACCGTACCATTACAAATTGTTGAATTCTATTTGATATTAGCCGCTGTGACTGCAGTCCGAACCGGACTCTTTTGGCAGCTTCTCGGGGCATCAGTTGTAATGCTCCTCGGCGGTTATTTAGGCGAAACGGCAGTGATCAGCCCTACAATCGGGTTCGTAGTGGGCATGGCCGGGTGGATTTATATCATCTATTTAATTTTTGCCGGAGAGGCTAATCAGGTCTCCGAAGGTTCGGGTAATGCAGCAAGTCAGAGCGCTTTTAAAACGCTGCGACTTATTGTGACAGTG LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSEGSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTACCATTACAAATTGTTGAATTCTATTTGATATTAGCCGCT---------GTG---ACTGCAGTCCGAACC---GGACTC------------------------------------TTTTGGCAG---CTTCTCGGGGCATCAGTTGTAATGCTCCTCGGCGGTTATTTAGGCGAA---------ACG------------------GCA------GTG---------------------------------ATC------------------------------------------------------------------AGCCCT------------------ACAATCGGG---TTCGTAGTGGGCATGGCCGGGTGGATTTATATCATCTATTTAATT---------------TTT------GCC---GGAGAGGCTAATCAGGTCTCCGAAGGT------TCG---GGTAATGCAGCAAGT---CAG---AGC---GCT---TTT---AAA---ACGCTG---CGACTTATTGTGACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSEG--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927840 [I-Firmicutes-a] PRGD_OTU018_0cb0137e97db5cec85ed6ffed1e322b6 gb|KJ927840| PRGD_OTU018_0cb0137e97db5cec85ed6ffed1e322b6, putative proteorhodopsin gene, partial cds. PRGD_OTU018_0cb0137e97db5cec85ed6ffed1e322b6, putative proteorhodopsin gene, partial cds. KJ927840 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) CTGATAACCGTACCACTACAAATTGTAGAATTCTATCTGATACTAGCCGCTGTGACTGCAGTCCGAACCGGACTCTTTTGGCAGCTTCTCGGAGCATCAGTTGTAATGCTCTTAGGGGGTTATCTCGGCGAAACGGCAGTGATCAGCCCTACAATCGGGTTCGTAGTGGGTATGGCCGGGTGGATTTATATTATCTATCTAATTTTTGCCGGAGAGGCTAATCAAGTCTCCGAAGGTTCGGGTAATGCAGCGAGTCAGAGCGCCTTTAAAACGCTGCGACTTATCGTGACAGTG LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSEGSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTACCACTACAAATTGTAGAATTCTATCTGATACTAGCCGCT---------GTG---ACTGCAGTCCGAACC---GGACTC------------------------------------TTTTGGCAG---CTTCTCGGAGCATCAGTTGTAATGCTCTTAGGGGGTTATCTCGGCGAA---------ACG------------------GCA------GTG---------------------------------ATC------------------------------------------------------------------AGCCCT------------------ACAATCGGG---TTCGTAGTGGGTATGGCCGGGTGGATTTATATTATCTATCTAATT---------------TTT------GCC---GGAGAGGCTAATCAAGTCTCCGAAGGT------TCG---GGTAATGCAGCGAGT---CAG---AGC---GCC---TTT---AAA---ACGCTG---CGACTTATCGTGACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSEG--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927843 [I-Firmicutes-a] PRGD_OTU018_3a7aa22554b5023c71a5649c4eb61545 gb|KJ927843| PRGD_OTU018_3a7aa22554b5023c71a5649c4eb61545, putative proteorhodopsin gene, partial cds. PRGD_OTU018_3a7aa22554b5023c71a5649c4eb61545, putative proteorhodopsin gene, partial cds. KJ927843 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) CTGATAACCGTACCATTACAAATTGTAGAATTCTATCTGATACTAGCCGCTGTGACTGCAGTCCGAACCGGACTCTTTTGGCAGCTTCTCGGAGCATCAATTGTAATGCTCTTAGGAGGTTATCTCGGCGAAACGGCAGTGATCAGCCCTACAATCGGGTTCGTAGTGGGTATGGCCGGGTGGATTTATATCATCTATCTAATTTTTGCCGGAGAGGCTAATCAAGTCTCCGAAGGTTCGGGTAATGCAGCGAGTCAGAGCGCCTTTAAAACGCTGCGACTTATTGTGACAGTG LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASIVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSEGSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTACCATTACAAATTGTAGAATTCTATCTGATACTAGCCGCT---------GTG---ACTGCAGTCCGAACC---GGACTC------------------------------------TTTTGGCAG---CTTCTCGGAGCATCAATTGTAATGCTCTTAGGAGGTTATCTCGGCGAA---------ACG------------------GCA------GTG---------------------------------ATC------------------------------------------------------------------AGCCCT------------------ACAATCGGG---TTCGTAGTGGGTATGGCCGGGTGGATTTATATCATCTATCTAATT---------------TTT------GCC---GGAGAGGCTAATCAAGTCTCCGAAGGT------TCG---GGTAATGCAGCGAGT---CAG---AGC---GCC---TTT---AAA---ACGCTG---CGACTTATTGTGACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASIVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSEG--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927842 [I-Firmicutes-a] PRGD_OTU018_33c3e63b8f6b39c8faf811e8da01bae8 gb|KJ927842| PRGD_OTU018_33c3e63b8f6b39c8faf811e8da01bae8, putative proteorhodopsin gene, partial cds. PRGD_OTU018_33c3e63b8f6b39c8faf811e8da01bae8, putative proteorhodopsin gene, partial cds. KJ927842 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTGATAACCGTACCATTACAAATTGTAGAATTTTATCTGATACTAGCCGCTGTGACTGCAGTCCGAACCGGACTCTTTTGGCAGCTTCTCGGAGCATCAGTTGTAATGCTCTTAGGGGGCTATCTGGGCGAAACGGCAGTGATCAGCCCTACAATCGGGTTCGTAGTGGGTATGGCCGGGTGGATTTATATCATTTATCTAATCTTTGCCGGAGAGGCTAATCAAGTCTCCGAAGGTTCGGGTAATGCAGCAAGTCAGAGCGCCTTTAAAACACTGCGACTTATTGTGACAGTG LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSEGSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTACCATTACAAATTGTAGAATTTTATCTGATACTAGCCGCT---------GTG---ACTGCAGTCCGAACC---GGACTC------------------------------------TTTTGGCAG---CTTCTCGGAGCATCAGTTGTAATGCTCTTAGGGGGCTATCTGGGCGAA---------ACG------------------GCA------GTG---------------------------------ATC------------------------------------------------------------------AGCCCT------------------ACAATCGGG---TTCGTAGTGGGTATGGCCGGGTGGATTTATATCATTTATCTAATC---------------TTT------GCC---GGAGAGGCTAATCAAGTCTCCGAAGGT------TCG---GGTAATGCAGCAAGT---CAG---AGC---GCC---TTT---AAA---ACACTG---CGACTTATTGTGACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSEG--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927864 [I-Firmicutes-a] PRGD_OTU018_b82766c98a253511defb8ede22ca67c9 gb|KJ927864| PRGD_OTU018_b82766c98a253511defb8ede22ca67c9, putative proteorhodopsin gene, partial cds. PRGD_OTU018_b82766c98a253511defb8ede22ca67c9, putative proteorhodopsin gene, partial cds. KJ927864 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTATAACCGTACCATTACAAATCGTAGAATTCTATCTGATACTAGCCGCTGTGACTGCAGTCCGAACCGGACTCTTTTGGCAACTTCTCGGAGCATCAGTTGTAATGCTCTTAGGGGGTTATCTCGGCGAAACGGCAGTGATCAGCCCTACAATCGGGTTCGTAGTGGGCATGGCCGGGTGGATTTATATCATCTATCTAATATTTGCCGGAGAGGCTAATCAAGTCTCCGAGGGTTCGGGTAATGCAGCAAGTCAGAGCGCTTTTAAAACGCTTCGACTTATTGTGACAGTG LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSEGSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATAACCGTACCATTACAAATCGTAGAATTCTATCTGATACTAGCCGCT---------GTG---ACTGCAGTCCGAACC---GGACTC------------------------------------TTTTGGCAA---CTTCTCGGAGCATCAGTTGTAATGCTCTTAGGGGGTTATCTCGGCGAA---------ACG------------------GCA------GTG---------------------------------ATC------------------------------------------------------------------AGCCCT------------------ACAATCGGG---TTCGTAGTGGGCATGGCCGGGTGGATTTATATCATCTATCTAATA---------------TTT------GCC---GGAGAGGCTAATCAAGTCTCCGAGGGT------TCG---GGTAATGCAGCAAGT---CAG---AGC---GCT---TTT---AAA---ACGCTT---CGACTTATTGTGACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSEG--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927846 [I-Firmicutes-a] PRGD_OTU018_62919eef1cb4c998e0d6ede00b85c2de gb|KJ927846| PRGD_OTU018_62919eef1cb4c998e0d6ede00b85c2de, putative proteorhodopsin gene, partial cds. PRGD_OTU018_62919eef1cb4c998e0d6ede00b85c2de, putative proteorhodopsin gene, partial cds. KJ927846 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) CTGATAACCGTACCATTACAAATTGTAGAATTCTATCTAATACTTGCCGCTGTGACTGCAGTCCGAACCGGACTCTTTTGGCAGCTTCTCGGAGCATCAGTTGTAATGCTCTTAGGGGGTTATCTCGGCGAAACGGCAGTGATCAGCCCAACAATTGGGTTCGTAGTGGGCATGGCGGGGTGGATTTACATCATCTACCTCATTTTTGCCGGAGAGGCTAACCAAGTCTCGGAAGGTTCGGGGAATGCAGCAAGTCAGAGCGCTTTTAAAACGCTGCGTCTTATTGTGACGGTG LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSEGSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTACCATTACAAATTGTAGAATTCTATCTAATACTTGCCGCT---------GTG---ACTGCAGTCCGAACC---GGACTC------------------------------------TTTTGGCAG---CTTCTCGGAGCATCAGTTGTAATGCTCTTAGGGGGTTATCTCGGCGAA---------ACG------------------GCA------GTG---------------------------------ATC------------------------------------------------------------------AGCCCA------------------ACAATTGGG---TTCGTAGTGGGCATGGCGGGGTGGATTTACATCATCTACCTCATT---------------TTT------GCC---GGAGAGGCTAACCAAGTCTCGGAAGGT------TCG---GGGAATGCAGCAAGT---CAG---AGC---GCT---TTT---AAA---ACGCTG---CGTCTTATTGTGACGGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSEG--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927875 [I-Firmicutes-a] PRGD_OTU018_cf9399d007141f36d6847fbcfd9cee45 gb|KJ927875| PRGD_OTU018_cf9399d007141f36d6847fbcfd9cee45, putative proteorhodopsin gene, partial cds. PRGD_OTU018_cf9399d007141f36d6847fbcfd9cee45, putative proteorhodopsin gene, partial cds. KJ927875 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) CTGATAACCGTACCGTTACAAATTGTAGAATTCTATCTAATACTAGCCGCTGTGACTGCAGTCCGAACCGGACTCTTTTGGCAGCTTCTCGGAGCATCAGTTGTAATGCTCTTAGGGGGTTATCTCGGCGAAACGGCAGTGATCAGCCCAACAATTGGGTTCGTAGTGGGCATGGCAGGGTGGATTTACATCATTTACCTCATTTTTGCCGGAGAGGCTAATAAAGTCTCGGAAGGTTCGGGAAATGCAGCAAGTCAGAGCGCTTTCAAAACGCTGCGACTCATTGTAACAGTG LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANKVSEGSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTACCGTTACAAATTGTAGAATTCTATCTAATACTAGCCGCT---------GTG---ACTGCAGTCCGAACC---GGACTC------------------------------------TTTTGGCAG---CTTCTCGGAGCATCAGTTGTAATGCTCTTAGGGGGTTATCTCGGCGAA---------ACG------------------GCA------GTG---------------------------------ATC------------------------------------------------------------------AGCCCA------------------ACAATTGGG---TTCGTAGTGGGCATGGCAGGGTGGATTTACATCATTTACCTCATT---------------TTT------GCC---GGAGAGGCTAATAAAGTCTCGGAAGGT------TCG---GGAAATGCAGCAAGT---CAG---AGC---GCT---TTC---AAA---ACGCTG---CGACTCATTGTAACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANKVSEG--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927849 [I-Firmicutes-a] PRGD_OTU018_6f263128ffba6fc0bec7ece2763c2d63 gb|KJ927849| PRGD_OTU018_6f263128ffba6fc0bec7ece2763c2d63, putative proteorhodopsin gene, partial cds. PRGD_OTU018_6f263128ffba6fc0bec7ece2763c2d63, putative proteorhodopsin gene, partial cds. KJ927849 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) CTGATAACCGTACCATTACAAATTGTTGAATTCTATCTGATACTTGCCGCTGTGACTGCAGTCCGAACAGGACTCTTTTGGCAGCTTCTCGGGGCATCAGTTGTAATGCTCTTAGGCGGATATTTAGGCGAAACGTCAGTTATCAGTCCAACAATCGGGTTTGTAGTGGGCATGGCAGGGTGGATTTATATCATTTACCTCATCTTTGCCGGAGAGGCCAATCAAGTCTCGGAAAGTTCGGGAAATGCAGCAAGTCAGAGCGCGTTTAAAACGCTGCGACTTATTGTAACAGTA LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETSVISPTIGFVVGMAGWIYIIYLIFAGEANQVSESSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTACCATTACAAATTGTTGAATTCTATCTGATACTTGCCGCT---------GTG---ACTGCAGTCCGAACA---GGACTC------------------------------------TTTTGGCAG---CTTCTCGGGGCATCAGTTGTAATGCTCTTAGGCGGATATTTAGGCGAA---------ACG------------------TCA------GTT---------------------------------ATC------------------------------------------------------------------AGTCCA------------------ACAATCGGG---TTTGTAGTGGGCATGGCAGGGTGGATTTATATCATTTACCTCATC---------------TTT------GCC---GGAGAGGCCAATCAAGTCTCGGAAAGT------TCG---GGAAATGCAGCAAGT---CAG---AGC---GCG---TTT---AAA---ACGCTG---CGACTTATTGTAACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------S--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSES--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927868 [I-Firmicutes-a] PRGD_OTU018_c0ca0662f28e770054097ab3ea761443 gb|KJ927868| PRGD_OTU018_c0ca0662f28e770054097ab3ea761443, putative proteorhodopsin gene, partial cds. PRGD_OTU018_c0ca0662f28e770054097ab3ea761443, putative proteorhodopsin gene, partial cds. KJ927868 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Arctic Ocean-Atlantic side (76.3333, 14.8833), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTGATAACCGTACCATTACAAATTGTTGAATTCTATCTGATACTTGCCGCTGTGACTGCAGTCCGAACAGGACTCTTTTGGCAGCTTCTCGGGGCATCAGTTGTAATGCTCCTAGGCGGATATTTAGGCGAAACGGCAGTTATCAGTCCAACAATCGGGTTTGTAGTGGGCATGGCAGGGTGGATTTATATCATTTACCTCATCTTTGCCGGAGAGGCTAACCAAGTCTCGGAAAGTTCGGGAAATGCAGCAAGTCAGAGCGCGTTTAAAACGCTGCGACTTATTGTAACAGTA LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSESSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTACCATTACAAATTGTTGAATTCTATCTGATACTTGCCGCT---------GTG---ACTGCAGTCCGAACA---GGACTC------------------------------------TTTTGGCAG---CTTCTCGGGGCATCAGTTGTAATGCTCCTAGGCGGATATTTAGGCGAA---------ACG------------------GCA------GTT---------------------------------ATC------------------------------------------------------------------AGTCCA------------------ACAATCGGG---TTTGTAGTGGGCATGGCAGGGTGGATTTATATCATTTACCTCATC---------------TTT------GCC---GGAGAGGCTAACCAAGTCTCGGAAAGT------TCG---GGAAATGCAGCAAGT---CAG---AGC---GCG---TTT---AAA---ACGCTG---CGACTTATTGTAACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSES--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927859 [I-Firmicutes-a] PRGD_OTU018_a9ba366698bd4fb8a880a64434400f25 gb|KJ927859| PRGD_OTU018_a9ba366698bd4fb8a880a64434400f25, putative proteorhodopsin gene, partial cds. PRGD_OTU018_a9ba366698bd4fb8a880a64434400f25, putative proteorhodopsin gene, partial cds. KJ927859 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTGATAACCGTACCATTACAAATTGTTGAATTCTATCTGATACTTGCCGCTGTGACTGCAGTCCGAACAGGACTCTTTTGGCAGCTTCTCGGGGCATCAGTTGTAATGCTCCTAGGTGGATATTTAGGCGAAACGGCAGTTATCAGTCCAACAATCGGGTTTGTAGTGGGCATGGCAGGATGGATTTATATCATTTACCTCATCTTTGCCGGAGAGGCTAACAAAGTCTCGGAAAGTTCGGGAAATGCAGCAAGTCAGAGCGCGTTTAAAACGCTGCGACTTATTGTAACAGTA LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANKVSESSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTACCATTACAAATTGTTGAATTCTATCTGATACTTGCCGCT---------GTG---ACTGCAGTCCGAACA---GGACTC------------------------------------TTTTGGCAG---CTTCTCGGGGCATCAGTTGTAATGCTCCTAGGTGGATATTTAGGCGAA---------ACG------------------GCA------GTT---------------------------------ATC------------------------------------------------------------------AGTCCA------------------ACAATCGGG---TTTGTAGTGGGCATGGCAGGATGGATTTATATCATTTACCTCATC---------------TTT------GCC---GGAGAGGCTAACAAAGTCTCGGAAAGT------TCG---GGAAATGCAGCAAGT---CAG---AGC---GCG---TTT---AAA---ACGCTG---CGACTTATTGTAACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANKVSES--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927867 [I-Firmicutes-a] PRGD_OTU018_bf10e15ee298a0d376da3bb7892c9edc gb|KJ927867| PRGD_OTU018_bf10e15ee298a0d376da3bb7892c9edc, putative proteorhodopsin gene, partial cds. PRGD_OTU018_bf10e15ee298a0d376da3bb7892c9edc, putative proteorhodopsin gene, partial cds. KJ927867 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -33.28, 45.35) CTGATAACCGTACCATTACAAATTGTTGAATTCTATCTGATACTTGCCGCTGTGACTGCAGTCCGAACAGGACTCTTTTGGCAGCTTCTCGGGGCATCAGTCGTAATGCTCCTAGGTGGATATTTAGGCGAAACGGCAGTTATCAGTCCAACAATCGGGTTTGTAGTGGGCATGGCAGGGTGGATTTATATCATTTACCTTATCTTTGCCGGAGAGGCTAACCAAGTCTCGGAAAGTTCGGGAAATGCAGCGAGTCAGAGCGCGTTTAAAACGCTGCGACTTATTGTAACAGTA LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSESSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTACCATTACAAATTGTTGAATTCTATCTGATACTTGCCGCT---------GTG---ACTGCAGTCCGAACA---GGACTC------------------------------------TTTTGGCAG---CTTCTCGGGGCATCAGTCGTAATGCTCCTAGGTGGATATTTAGGCGAA---------ACG------------------GCA------GTT---------------------------------ATC------------------------------------------------------------------AGTCCA------------------ACAATCGGG---TTTGTAGTGGGCATGGCAGGGTGGATTTATATCATTTACCTTATC---------------TTT------GCC---GGAGAGGCTAACCAAGTCTCGGAAAGT------TCG---GGAAATGCAGCGAGT---CAG---AGC---GCG---TTT---AAA---ACGCTG---CGACTTATTGTAACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSES--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927858 [I-Firmicutes-a] PRGD_OTU018_a5a6c0954d93a6befe8e9a983dd28128 gb|KJ927858| PRGD_OTU018_a5a6c0954d93a6befe8e9a983dd28128, putative proteorhodopsin gene, partial cds. PRGD_OTU018_a5a6c0954d93a6befe8e9a983dd28128, putative proteorhodopsin gene, partial cds. KJ927858 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -33.28, 45.35) CTGATAACCGTACCATTACAAATTGTTGAATTCTATCTGATACTTGCCGCTGTGACTGCAGTCCGAACAGGACTCTTTTGGCAGCTTCTCGGGGCATCAGTTGTAATGCTCCTAGGTGGATATTTAGGCGAAACGGCAGTTATCAGTCCAACAATCGGGTTTGTAGTGGGCATGGCAGGGTGGGTTTATATCATTTACCTCATCTTTGCCGGAGAAGCTAACCAAGTCTCGGAAAGTTCGGGAAATGCAGCAAGTCAGAGCGCGTTTAAAACGCTGCGACTTATTGTAACAGTA LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWVYIIYLIFAGEANQVSESSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTACCATTACAAATTGTTGAATTCTATCTGATACTTGCCGCT---------GTG---ACTGCAGTCCGAACA---GGACTC------------------------------------TTTTGGCAG---CTTCTCGGGGCATCAGTTGTAATGCTCCTAGGTGGATATTTAGGCGAA---------ACG------------------GCA------GTT---------------------------------ATC------------------------------------------------------------------AGTCCA------------------ACAATCGGG---TTTGTAGTGGGCATGGCAGGGTGGGTTTATATCATTTACCTCATC---------------TTT------GCC---GGAGAAGCTAACCAAGTCTCGGAAAGT------TCG---GGAAATGCAGCAAGT---CAG---AGC---GCG---TTT---AAA---ACGCTG---CGACTTATTGTAACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWVYIIYLI-----F--A-GEANQVSES--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927871 [I-Firmicutes-a] PRGD_OTU018_c8ab3a21f8396813d378322698bfdf15 gb|KJ927871| PRGD_OTU018_c8ab3a21f8396813d378322698bfdf15, putative proteorhodopsin gene, partial cds. PRGD_OTU018_c8ab3a21f8396813d378322698bfdf15, putative proteorhodopsin gene, partial cds. KJ927871 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-35.05, 23.73) CTGATAACCGTACCATTACAGATTGTTGAATTCTATCTGATACTTGCCGCTGTGACTGCAGTCCGAACAGGACTCTTTTGGCAGCTTCTCGGGGCATCAATTGTAATGCTTCTAGGTGGATATTTAGGCGAAACGGCAGTTATCAGTCCAACAATTGGGTTCGTAGTGGGCATGGCAGGGTGGATTTATATCATTTACCTCATCTTTGCCGGAGAGGCTAACCAAGTCTCGGAAAGTTCGGGAAATGCAGCAAGTCAGAGCGCGTTCAAAACGCTGCGACTTATTGTAACAGTG LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASIVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSESSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTACCATTACAGATTGTTGAATTCTATCTGATACTTGCCGCT---------GTG---ACTGCAGTCCGAACA---GGACTC------------------------------------TTTTGGCAG---CTTCTCGGGGCATCAATTGTAATGCTTCTAGGTGGATATTTAGGCGAA---------ACG------------------GCA------GTT---------------------------------ATC------------------------------------------------------------------AGTCCA------------------ACAATTGGG---TTCGTAGTGGGCATGGCAGGGTGGATTTATATCATTTACCTCATC---------------TTT------GCC---GGAGAGGCTAACCAAGTCTCGGAAAGT------TCG---GGAAATGCAGCAAGT---CAG---AGC---GCG---TTC---AAA---ACGCTG---CGACTTATTGTAACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASIVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSES--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927865 [I-Firmicutes-a] PRGD_OTU018_ba210d677db4ba170349a8b3d74fe1af gb|KJ927865| PRGD_OTU018_ba210d677db4ba170349a8b3d74fe1af, putative proteorhodopsin gene, partial cds. PRGD_OTU018_ba210d677db4ba170349a8b3d74fe1af, putative proteorhodopsin gene, partial cds. KJ927865 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (33.762, 29.175), Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTGATAACCGTACCATTACAAATTGTTGAATTCTATCTGATACTCGCCGCTGTGACTGCAGTCCGAACAGGACTCTTTTGGCAGCTTCTCGGGGCATCAGTTGTAATGCTCCTGGGTGGATATTTAGGCGAAACGGCAGTTATCAGTCCAACAATTGGGTTCGTAGTGGGCATGGCAGGGTGGATTTATATCATTTACCTCATCTTTGCCGGAGAGGCTAACCAAGTCTCGGAAAGTTCGGGAAATGCAGCAAGTCAGAGCGCGTTCAAAACGCTGCGACTTATTGTCACAGTG LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSESSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTACCATTACAAATTGTTGAATTCTATCTGATACTCGCCGCT---------GTG---ACTGCAGTCCGAACA---GGACTC------------------------------------TTTTGGCAG---CTTCTCGGGGCATCAGTTGTAATGCTCCTGGGTGGATATTTAGGCGAA---------ACG------------------GCA------GTT---------------------------------ATC------------------------------------------------------------------AGTCCA------------------ACAATTGGG---TTCGTAGTGGGCATGGCAGGGTGGATTTATATCATTTACCTCATC---------------TTT------GCC---GGAGAGGCTAACCAAGTCTCGGAAAGT------TCG---GGAAATGCAGCAAGT---CAG---AGC---GCG---TTC---AAA---ACGCTG---CGACTTATTGTCACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSES--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927881 [I-Firmicutes-a] PRGD_OTU018_fe5db8cffc887879c507167087325713 gb|KJ927881| PRGD_OTU018_fe5db8cffc887879c507167087325713, putative proteorhodopsin gene, partial cds. PRGD_OTU018_fe5db8cffc887879c507167087325713, putative proteorhodopsin gene, partial cds. KJ927881 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTGATAACCGTACCATTACAAATTGTTGAATTCTATCTGATACTTGCCGCTGTGACTGCAGTCCGAACAGGACTCTTTTGGCAGCTTCTCGGGGCATCAGTTGTAATGCTCCTGGGTGGATATTTAGGCGAAACGGCAGTTATCAGTCCAACAATTGGGTTCGTAGTGGGCATGGCAGGGTGGATTTATATCATTTACCTCATCTTCGCCGGAGAGGCTAACCAGGTCTCGGAAAGTTCGGGAAATGCAGCAAGTCAGAGCGCGTTTAAAACGCTGCGACTTATTGTAACAGTG LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSESSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTACCATTACAAATTGTTGAATTCTATCTGATACTTGCCGCT---------GTG---ACTGCAGTCCGAACA---GGACTC------------------------------------TTTTGGCAG---CTTCTCGGGGCATCAGTTGTAATGCTCCTGGGTGGATATTTAGGCGAA---------ACG------------------GCA------GTT---------------------------------ATC------------------------------------------------------------------AGTCCA------------------ACAATTGGG---TTCGTAGTGGGCATGGCAGGGTGGATTTATATCATTTACCTCATC---------------TTC------GCC---GGAGAGGCTAACCAGGTCTCGGAAAGT------TCG---GGAAATGCAGCAAGT---CAG---AGC---GCG---TTT---AAA---ACGCTG---CGACTTATTGTAACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSES--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927855 [I-Firmicutes-a] PRGD_OTU018_95e33baa90fead9b37b801a1e46f3d71 gb|KJ927855| PRGD_OTU018_95e33baa90fead9b37b801a1e46f3d71, putative proteorhodopsin gene, partial cds. PRGD_OTU018_95e33baa90fead9b37b801a1e46f3d71, putative proteorhodopsin gene, partial cds. KJ927855 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTGATAACCGTACCATTACAAATTGTTGAATTCTATCTGATACTTGCCGCTGTGACTGCAGTCCGAACAGGACTCTTTTGGCAGCTTCTCGGGGCATCAGTTGTAATGCTCCTAGGAGGATATCTAGGCGAAACGGCAGTTATCAGTCCAACAATTGGGTTCATAGTGGGCATGGCAGGGTGGATTTATATCATTTACCTCATCTTTGCCGGAGAGGCCAATCAAGTATCGGAAAGTTCGGGAAATGCAGCAAGTCAGAGCGCGTTTAAAACGCTGCGACTTATTGTAACAGTG LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFIVGMAGWIYIIYLIFAGEANQVSESSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTACCATTACAAATTGTTGAATTCTATCTGATACTTGCCGCT---------GTG---ACTGCAGTCCGAACA---GGACTC------------------------------------TTTTGGCAG---CTTCTCGGGGCATCAGTTGTAATGCTCCTAGGAGGATATCTAGGCGAA---------ACG------------------GCA------GTT---------------------------------ATC------------------------------------------------------------------AGTCCA------------------ACAATTGGG---TTCATAGTGGGCATGGCAGGGTGGATTTATATCATTTACCTCATC---------------TTT------GCC---GGAGAGGCCAATCAAGTATCGGAAAGT------TCG---GGAAATGCAGCAAGT---CAG---AGC---GCG---TTT---AAA---ACGCTG---CGACTTATTGTAACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FIVGMAGWIYIIYLI-----F--A-GEANQVSES--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927873 [I-Firmicutes-a] PRGD_OTU018_cb944c42bfa2267976a90961c53f4773 gb|KJ927873| PRGD_OTU018_cb944c42bfa2267976a90961c53f4773, putative proteorhodopsin gene, partial cds. PRGD_OTU018_cb944c42bfa2267976a90961c53f4773, putative proteorhodopsin gene, partial cds. KJ927873 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATAACCGTACCATTACAAATTGTTGAATTCTATCTGATACTTGCCGCTGTGACTGCAGTCCGAACAGGACTCTTTTGGCAGCTTCTCGGGGCATCAGATGTGATGCTCCTAGGTGGATATCTAGGCGAAACGGCAGTTATCAGTCCAACAATTGGGTTCGTAGTGGGCATGGCAGGGTGGATTTATATCATTTACCTCATCTTTGCCGGAGAGGCCAATCAAGTATCGGAAAGTTCGGGAAATGCTGCAAGTCAGAGCGCGTTTAAAACGCTGCGACTTATTGTAACAGTG LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASDVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSESSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTACCATTACAAATTGTTGAATTCTATCTGATACTTGCCGCT---------GTG---ACTGCAGTCCGAACA---GGACTC------------------------------------TTTTGGCAG---CTTCTCGGGGCATCAGATGTGATGCTCCTAGGTGGATATCTAGGCGAA---------ACG------------------GCA------GTT---------------------------------ATC------------------------------------------------------------------AGTCCA------------------ACAATTGGG---TTCGTAGTGGGCATGGCAGGGTGGATTTATATCATTTACCTCATC---------------TTT------GCC---GGAGAGGCCAATCAAGTATCGGAAAGT------TCG---GGAAATGCTGCAAGT---CAG---AGC---GCG---TTT---AAA---ACGCTG---CGACTTATTGTAACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASDVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSES--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927834 [I-Firmicutes-a] PRGD_OTU018_otuREP_a6ca15369026a04c9a0dec6fad5b98c1 gb|KJ927834| PRGD_OTU018_otuREP_a6ca15369026a04c9a0dec6fad5b98c1, putative proteorhodopsin gene, partial cds. PRGD_OTU018_otuREP_a6ca15369026a04c9a0dec6fad5b98c1, putative proteorhodopsin gene, partial cds. KJ927834 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175; 33.935, 18.508), Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTGATAACCGTACCATTACAAATTGTTGAATTCTATCTGATACTTGCCGCTGTGACTGCAGTCCGAACAGGACTCTTTTGGCAGCTTCTCGGGGCATCAGTTGTAATGCTCCTAGGTGGATATCTAGGCGAAACGGCAGTTATCAGTCCAACAATTGGGTTCGTAGTGGGCATGGCAGGGTGGATTTATATCATTTACCTCATCTTTGCCGGAGAGGCCAATCAAGTATCGGAAAGTTCGGGAAATGCAGCAAGTCAGAGCGCGTTTAAAACGCTGCGACTTATTGTAACAGTG LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSESSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTACCATTACAAATTGTTGAATTCTATCTGATACTTGCCGCT---------GTG---ACTGCAGTCCGAACA---GGACTC------------------------------------TTTTGGCAG---CTTCTCGGGGCATCAGTTGTAATGCTCCTAGGTGGATATCTAGGCGAA---------ACG------------------GCA------GTT---------------------------------ATC------------------------------------------------------------------AGTCCA------------------ACAATTGGG---TTCGTAGTGGGCATGGCAGGGTGGATTTATATCATTTACCTCATC---------------TTT------GCC---GGAGAGGCCAATCAAGTATCGGAAAGT------TCG---GGAAATGCAGCAAGT---CAG---AGC---GCG---TTT---AAA---ACGCTG---CGACTTATTGTAACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSES--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927848 [I-Firmicutes-a] PRGD_OTU018_6c9efe4d536205e18139910af0d5ce81 gb|KJ927848| PRGD_OTU018_6c9efe4d536205e18139910af0d5ce81, putative proteorhodopsin gene, partial cds. PRGD_OTU018_6c9efe4d536205e18139910af0d5ce81, putative proteorhodopsin gene, partial cds. KJ927848 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATAACCGTACCATTACAAATTGTTGAATTCTATCTGATACTAGCCGCTGTGACTGCAGTCCGAACAGGACTCTTTTGGCAGCTTCTCGGGGCATCAGTTGTAATGCTCCTAGGCGGATATTTAGGCGAAACGGCAGTTATAAGTCCAACAATTGGGTTCGTAGTGGGCATGGCAGGGTGGATTTATATCATTTACCTCATCTTTGCCGGAGAAGCTAACCAAGTCTCGGAAGGTTCGGGAAATGCAGCAAGTCAGAGCGCGTTTAAAACGCTGCGACTTATTGTAACAGTG LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSEGSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTACCATTACAAATTGTTGAATTCTATCTGATACTAGCCGCT---------GTG---ACTGCAGTCCGAACA---GGACTC------------------------------------TTTTGGCAG---CTTCTCGGGGCATCAGTTGTAATGCTCCTAGGCGGATATTTAGGCGAA---------ACG------------------GCA------GTT---------------------------------ATA------------------------------------------------------------------AGTCCA------------------ACAATTGGG---TTCGTAGTGGGCATGGCAGGGTGGATTTATATCATTTACCTCATC---------------TTT------GCC---GGAGAAGCTAACCAAGTCTCGGAAGGT------TCG---GGAAATGCAGCAAGT---CAG---AGC---GCG---TTT---AAA---ACGCTG---CGACTTATTGTAACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSEG--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927850 [I-Firmicutes-a] PRGD_OTU018_71ea2c0a6aeb9ea5697b55893f2e0824 gb|KJ927850| PRGD_OTU018_71ea2c0a6aeb9ea5697b55893f2e0824, putative proteorhodopsin gene, partial cds. PRGD_OTU018_71ea2c0a6aeb9ea5697b55893f2e0824, putative proteorhodopsin gene, partial cds. KJ927850 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATAACCGTACCATTACAAATTGTTGAATTCTATCTGATATTAGCCGCTGTGACTGCAGTCCGAACTGGACTCTTCTGGCAGCTTCTCGGGGCATCAATTGTAATGCTCCTAGGCGGATATTTAGGCGAAACGGCAGTTATTAGCCCAACAATTGGGTTCGTAGTGGGCATGGCAGGGTGGATTTATATCATTTACCTCATCTTTGCCGGAGAGGCTAACCAAGTCTCGGAAAGTTCGGGAAATGCAGCAAGTCAGAGCGCTTTTAAAACGCTGCGACTTATTGTCACAGTG LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASIVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQVSESSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACCGTACCATTACAAATTGTTGAATTCTATCTGATATTAGCCGCT---------GTG---ACTGCAGTCCGAACT---GGACTC------------------------------------TTCTGGCAG---CTTCTCGGGGCATCAATTGTAATGCTCCTAGGCGGATATTTAGGCGAA---------ACG------------------GCA------GTT---------------------------------ATT------------------------------------------------------------------AGCCCA------------------ACAATTGGG---TTCGTAGTGGGCATGGCAGGGTGGATTTATATCATTTACCTCATC---------------TTT------GCC---GGAGAGGCTAACCAAGTCTCGGAAAGT------TCG---GGAAATGCAGCAAGT---CAG---AGC---GCT---TTT---AAA---ACGCTG---CGACTTATTGTCACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASIVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQVSES--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927835 [I-Firmicutes-a] PRGD_OTU018_04f937f5994b6da892243fd64e4a072f gb|KJ927835| PRGD_OTU018_04f937f5994b6da892243fd64e4a072f, putative proteorhodopsin gene, partial cds. PRGD_OTU018_04f937f5994b6da892243fd64e4a072f, putative proteorhodopsin gene, partial cds. KJ927835 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATAACAGTGCCTCTCCAAATTGTTGAATTCTATTTAATTCTGGCTGCAGTAACTGCTGTCAGGACAGGATTATTCTGGCAGCTACTCGGCGCATCTATTGTGATGTTACTGGGCGGATACCTTGGCGAAACCAATGTTATCAGTCCTGTTGTTGGCTTTGTCGTGGGGATGGCTGGCTGGTTATATATCATCTATCTCATCTTCGCGGGGGAAGCCAATCGCATATCGGAGGGTTCCGGCAATGCTGCAAGTCAGAGCGCGTTCAAAACACTGCGCTTGATAGTCACAGTT LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASIVMLLGGYLGETNVISPVVGFVVGMAGWLYIIYLIFAGEANRISEGSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACAGTGCCTCTCCAAATTGTTGAATTCTATTTAATTCTGGCTGCA---------GTA---ACTGCTGTCAGGACA---GGATTA------------------------------------TTCTGGCAG---CTACTCGGCGCATCTATTGTGATGTTACTGGGCGGATACCTTGGCGAA---------ACC------------------AAT------GTT---------------------------------ATC------------------------------------------------------------------AGTCCT------------------GTTGTTGGC---TTTGTCGTGGGGATGGCTGGCTGGTTATATATCATCTATCTCATC---------------TTC------GCG---GGGGAAGCCAATCGCATATCGGAGGGT------TCC---GGCAATGCTGCAAGT---CAG---AGC---GCG---TTC---AAA---ACACTG---CGCTTGATAGTCACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASIVMLLGGYLGE---T------N--V-----------I----------------------SP------VVG-FVVGMAGWLYIIYLI-----F--A-GEANRISEG--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927856 [I-Firmicutes-a] PRGD_OTU018_9ee4c834f7d503c786ee9947c0c1620b gb|KJ927856| PRGD_OTU018_9ee4c834f7d503c786ee9947c0c1620b, putative proteorhodopsin gene, partial cds. PRGD_OTU018_9ee4c834f7d503c786ee9947c0c1620b, putative proteorhodopsin gene, partial cds. KJ927856 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATAACCGTTCCACTACAAATCGTTGAATTCTATCTCATATTAGCCGCTGTTACCGCGGTCCGGACGGGGCTCTTCTGGCAGCTCTTAGGCGCTTCGGTTGTGATGCTGTTGGGTGGCTACCTCGGTGAAACAGCCGTCATAAGTCCTACTATTGGATTTGTAATAGGAATGGCCGGATGGATCTATATCATCTATCTTATTTTTGCGGGCGAGGCTAACCAGGTTTCGGAAGGCTCGGGCAACGCTGCAAGTCAAAGCGCCTTTAAAACATTGCGTCTAATTGTGACAGTT LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFVIGMAGWIYIIYLIFAGEANQVSEGSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATAACCGTTCCACTACAAATCGTTGAATTCTATCTCATATTAGCCGCT---------GTT---ACCGCGGTCCGGACG---GGGCTC------------------------------------TTCTGGCAG---CTCTTAGGCGCTTCGGTTGTGATGCTGTTGGGTGGCTACCTCGGTGAA---------ACA------------------GCC------GTC---------------------------------ATA------------------------------------------------------------------AGTCCT------------------ACTATTGGA---TTTGTAATAGGAATGGCCGGATGGATCTATATCATCTATCTTATT---------------TTT------GCG---GGCGAGGCTAACCAGGTTTCGGAAGGC------TCG---GGCAACGCTGCAAGT---CAA---AGC---GCC---TTT---AAA---ACATTG---CGTCTAATTGTGACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVIGMAGWIYIIYLI-----F--A-GEANQVSEG--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927838 [I-Firmicutes-a] PRGD_OTU018_0807bf18665aa24be87affa43e1f3b8b gb|KJ927838| PRGD_OTU018_0807bf18665aa24be87affa43e1f3b8b, putative proteorhodopsin gene, partial cds. PRGD_OTU018_0807bf18665aa24be87affa43e1f3b8b, putative proteorhodopsin gene, partial cds. KJ927838 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) CTGATTACTGTTCCACTGCAAATTGTAGAGTTCTATCTTATATTAGCCGCCGTCACTGCGGTGCGGACCGGGTTGTTCTGGCAACTCTTAGGAGCCTCAGTAGTAATGCTCTTAGGCGGATATCTTGGAGAGACAGCGGTCATTAGTCCGACTATTGGATTCATTGTTGGGATGGCTGGATGGCTCTACATTATCTACTTGATTTTCGCCGGAGAGGCGAGTCAAGTTTCGGCCGCGAGTGGCAATGCCGCGAGTCAAAGCGCGTTCCGCACCCTCCGCTTAATTGTCACCATA LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASVVMLLGGYLGETAVISPTIGFIVGMAGWLYIIYLIFAGEASQVSAASGNAASQSAFRTLRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTTCCACTGCAAATTGTAGAGTTCTATCTTATATTAGCCGCC---------GTC---ACTGCGGTGCGGACC---GGGTTG------------------------------------TTCTGGCAA---CTCTTAGGAGCCTCAGTAGTAATGCTCTTAGGCGGATATCTTGGAGAG---------ACA------------------GCG------GTC---------------------------------ATT------------------------------------------------------------------AGTCCG------------------ACTATTGGA---TTCATTGTTGGGATGGCTGGATGGCTCTACATTATCTACTTGATT---------------TTC------GCC---GGAGAGGCGAGTCAAGTTTCGGCCGCG------AGT---GGCAATGCCGCGAGT---CAA---AGC---GCG---TTC---CGC---ACCCTC---CGCTTAATTGTCACCATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASVVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FIVGMAGWLYIIYLI-----F--A-GEASQVSAA--S-GNAAS-Q-S-A-F-R-TL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927839 [I-Firmicutes-a] PRGD_OTU018_08e3446e08c45ff990b22a07a691e18f gb|KJ927839| PRGD_OTU018_08e3446e08c45ff990b22a07a691e18f, putative proteorhodopsin gene, partial cds. PRGD_OTU018_08e3446e08c45ff990b22a07a691e18f, putative proteorhodopsin gene, partial cds. KJ927839 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATTACTGTTCCACTGCAAATTGTGGAGTTCTATCTTATATTAGCCGCCGTCACTGCGGTGCGGACCGGGTTGTTCTGGCAACTCTTAGGAGCCTCAATAGTAATGCTCCTAGGCGGATATCTTGGAGAGACTGCGGTCATTAGTCCGACTATTGGATTCATTGTTGGGATGGCGGGATGGCTCTACATTATCTATTTGATTTTCGCCGGAGAGGCGAGTCAAGTTTCGGCCGCGAGTGGGAATGCCGCGAGTCAGAGCGCTTTTCGCACCCTCCGGTTAATTGTCACCATC LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASIVMLLGGYLGETAVISPTIGFIVGMAGWLYIIYLIFAGEASQVSAASGNAASQSAFRTLRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTTCCACTGCAAATTGTGGAGTTCTATCTTATATTAGCCGCC---------GTC---ACTGCGGTGCGGACC---GGGTTG------------------------------------TTCTGGCAA---CTCTTAGGAGCCTCAATAGTAATGCTCCTAGGCGGATATCTTGGAGAG---------ACT------------------GCG------GTC---------------------------------ATT------------------------------------------------------------------AGTCCG------------------ACTATTGGA---TTCATTGTTGGGATGGCGGGATGGCTCTACATTATCTATTTGATT---------------TTC------GCC---GGAGAGGCGAGTCAAGTTTCGGCCGCG------AGT---GGGAATGCCGCGAGT---CAG---AGC---GCT---TTT---CGC---ACCCTC---CGGTTAATTGTCACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASIVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FIVGMAGWLYIIYLI-----F--A-GEASQVSAA--S-GNAAS-Q-S-A-F-R-TL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927844 [I-Firmicutes-a] PRGD_OTU018_41cc0bc3363c30510cb37f273cb3b22d gb|KJ927844| PRGD_OTU018_41cc0bc3363c30510cb37f273cb3b22d, putative proteorhodopsin gene, partial cds. PRGD_OTU018_41cc0bc3363c30510cb37f273cb3b22d, putative proteorhodopsin gene, partial cds. KJ927844 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATTACTGTTCCACTACAAATCGTAGAGTTCTATCTTATATTAGCCGCCGTCACTGCGGTGCGTACCGGGTTGTTCTGGCAGCTCTTAGGAGCCTCAATAGTAATGCTCTTAGGCGGATATCTTGGAGAGACTGCGGTCATTAGTCCGACTATTGGATTCATTGTTGGGATGGCAGGATGGCTCTACATTATCTACTTGATTTTCGCCGGAGAGGCGAGTCAAGTTTCGGCCGCGAGTGGGAATGCCGCGAGTCAGAGCGCTTTCCGCACCCTCCGCTTAATTGTCACCATC LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASIVMLLGGYLGETAVISPTIGFIVGMAGWLYIIYLIFAGEASQVSAASGNAASQSAFRTLRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACTGTTCCACTACAAATCGTAGAGTTCTATCTTATATTAGCCGCC---------GTC---ACTGCGGTGCGTACC---GGGTTG------------------------------------TTCTGGCAG---CTCTTAGGAGCCTCAATAGTAATGCTCTTAGGCGGATATCTTGGAGAG---------ACT------------------GCG------GTC---------------------------------ATT------------------------------------------------------------------AGTCCG------------------ACTATTGGA---TTCATTGTTGGGATGGCAGGATGGCTCTACATTATCTACTTGATT---------------TTC------GCC---GGAGAGGCGAGTCAAGTTTCGGCCGCG------AGT---GGGAATGCCGCGAGT---CAG---AGC---GCT---TTC---CGC---ACCCTC---CGCTTAATTGTCACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASIVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FIVGMAGWLYIIYLI-----F--A-GEASQVSAA--S-GNAAS-Q-S-A-F-R-TL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927841 [I-Firmicutes-a] PRGD_OTU018_25edcc1dfb200d74d23d1fda60e5e134 gb|KJ927841| PRGD_OTU018_25edcc1dfb200d74d23d1fda60e5e134, putative proteorhodopsin gene, partial cds. PRGD_OTU018_25edcc1dfb200d74d23d1fda60e5e134, putative proteorhodopsin gene, partial cds. KJ927841 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185), Indian Ocean (-23.5956, 69.0419) CTTATCACTGTTCCCTTACAAATCGTCGAATTCTACCTAATTTTGGCCGCTGTGACCGCAGTTCGAACCGGATTGTTTTGGCAGCTCTTAGGCGCTTCGATTGTAATGCTTCTTGGGGGATACCTTGGCGAAACTGCCGTCATAAGCCCGACAATTGGCTTCGTCGTAGGGATGGCCGGATGGATATACATTATCTATTTGATCTTTGCAGGAGAAGCAAATCAAATCTCAGAAGGCTCAGGCAACGCTGCGAGTCAAAGCGCTTTCAAGACCTTACGACTAATAGTGACAGTT LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASIVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQISEGSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATCACTGTTCCCTTACAAATCGTCGAATTCTACCTAATTTTGGCCGCT---------GTG---ACCGCAGTTCGAACC---GGATTG------------------------------------TTTTGGCAG---CTCTTAGGCGCTTCGATTGTAATGCTTCTTGGGGGATACCTTGGCGAA---------ACT------------------GCC------GTC---------------------------------ATA------------------------------------------------------------------AGCCCG------------------ACAATTGGC---TTCGTCGTAGGGATGGCCGGATGGATATACATTATCTATTTGATC---------------TTT------GCA---GGAGAAGCAAATCAAATCTCAGAAGGC------TCA---GGCAACGCTGCGAGT---CAA---AGC---GCT---TTC---AAG---ACCTTA---CGACTAATAGTGACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASIVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQISEG--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ927870 [I-Firmicutes-a] PRGD_OTU018_c68e4f0c8d17259eb7e3dd24b2a0a00c gb|KJ927870| PRGD_OTU018_c68e4f0c8d17259eb7e3dd24b2a0a00c, putative proteorhodopsin gene, partial cds. PRGD_OTU018_c68e4f0c8d17259eb7e3dd24b2a0a00c, putative proteorhodopsin gene, partial cds. KJ927870 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTATCACTGTTCCCTTACAAATCGTCGAATTCTACCTAATTTTGGCCGCTGTGACCGCAGTTCGAACCGGATTGTTTTGGCAGCTCTTAGGCGCTTCGATTGTAATGCTTCTTGGGGGATACCTTGGCGAAACTGCCGTCATAAGCCCGACGATTGGCTTCGTCGTAGGGATGGCCGGATGGATATACATTATCTATCTGATCTTTGCAGGAGAAGCAAATCAAATCTCAGAAGGCTCGGGCAACGCTGCGAGTCAAAGCGCTTTCAAGACCTTACGACTAATAGTGACAGTT LITVPLQIVEFYLILAAVTAVRTGLFWQLLGASIVMLLGGYLGETAVISPTIGFVVGMAGWIYIIYLIFAGEANQISEGSGNAASQSAFKTLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATCACTGTTCCCTTACAAATCGTCGAATTCTACCTAATTTTGGCCGCT---------GTG---ACCGCAGTTCGAACC---GGATTG------------------------------------TTTTGGCAG---CTCTTAGGCGCTTCGATTGTAATGCTTCTTGGGGGATACCTTGGCGAA---------ACT------------------GCC------GTC---------------------------------ATA------------------------------------------------------------------AGCCCG------------------ACGATTGGC---TTCGTCGTAGGGATGGCCGGATGGATATACATTATCTATCTGATC---------------TTT------GCA---GGAGAAGCAAATCAAATCTCAGAAGGC------TCG---GGCAACGCTGCGAGT---CAA---AGC---GCT---TTC---AAG---ACCTTA---CGACTAATAGTGACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLGASIVMLLGGYLGE---T------A--V-----------I----------------------SP------TIG-FVVGMAGWIYIIYLI-----F--A-GEANQISEG--S-GNAAS-Q-S-A-F-K-TL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ929574 [I-Firmicutes-a] PRGD_OTU157_otuREP_76a8960ef41fbb5f0cadf64be496203a gb|KJ929574| PRGD_OTU157_otuREP_76a8960ef41fbb5f0cadf64be496203a, putative proteorhodopsin gene, partial cds. PRGD_OTU157_otuREP_76a8960ef41fbb5f0cadf64be496203a, putative proteorhodopsin gene, partial cds. KJ929574 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTGATCACAGTACCACTGCAAATCGTTGAATTTTATTTAATATTGGCTGCGGTGACCGCTGTTCGAACTGGATTATTCTGGCAGCTGTTAATCGCCTCGGTAGTAATGCTCCTGGGCGGTTATGGCGGGGAGACCGGTGTCCTGTCGCCAGCAGTTGGTTTTGTTATCGGGATGGCCGGATGGCTTTACATCATCTACCTAATCTTCTTCGGCGAGGCGAGTAAGGTCTCGGCAGAGAGCGGTAACGCGGCGAGTCAAATGGCGTTCTATTGGCTCCGATTGATTGTTACCGTC LITVPLQIVEFYLILAAVTAVRTGLFWQLLIASVVMLLGGYGGETGVLSPAVGFVIGMAGWLYIIYLIFFGEASKVSAESGNAASQMAFYWLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTACCACTGCAAATCGTTGAATTTTATTTAATATTGGCTGCG---------GTG---ACCGCTGTTCGAACT---GGATTA------------------------------------TTCTGGCAG---CTGTTAATCGCCTCGGTAGTAATGCTCCTGGGCGGTTATGGCGGGGAG---------ACC------------------GGT------GTC---------------------------------CTG------------------------------------------------------------------TCGCCA------------------GCAGTTGGT---TTTGTTATCGGGATGGCCGGATGGCTTTACATCATCTACCTAATC---------------TTC------TTC---GGCGAGGCGAGTAAGGTCTCGGCAGAG------AGC---GGTAACGCGGCGAGT---CAA---ATG---GCG---TTC---TAT---TGGCTC---CGATTGATTGTTACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLIASVVMLLGGYGGE---T------G--V-----------L----------------------SP------AVG-FVIGMAGWLYIIYLI-----F--F-GEASKVSAE--S-GNAAS-Q-M-A-F-Y-WL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ929577 [I-Firmicutes-a] PRGD_OTU157_ac14d409d6816ca9e58edfaecf5f346f gb|KJ929577| PRGD_OTU157_ac14d409d6816ca9e58edfaecf5f346f, putative proteorhodopsin gene, partial cds. PRGD_OTU157_ac14d409d6816ca9e58edfaecf5f346f, putative proteorhodopsin gene, partial cds. KJ929577 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTGATCACAGTACCACTGCAAATCGTTGAATTTTATTTAATATTGGCTGCGGTGACCGCTGTTCGAACTGGATTATTCTGGCAGCTGTTAATCGCCTCGGTAGTAATGCTCTTGGGCGGTTATGGCGGGGAGACCGGTGTCCTGTCGCCAGCAGTTGGTTTTGTTATCGGAATGGCCGGATGGCTTTACATCATCTACCTAATCTTTTTCGGCGAGGCTAGTAAGGTTTCGGCAGAGAGCGGTAACGCGGCGAGTCAAATGGCGTTCTATTGGCTCCGATTGATTGTTACCGTC LITVPLQIVEFYLILAAVTAVRTGLFWQLLIASVVMLLGGYGGETGVLSPAVGFVIGMAGWLYIIYLIFFGEASKVSAESGNAASQMAFYWLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTACCACTGCAAATCGTTGAATTTTATTTAATATTGGCTGCG---------GTG---ACCGCTGTTCGAACT---GGATTA------------------------------------TTCTGGCAG---CTGTTAATCGCCTCGGTAGTAATGCTCTTGGGCGGTTATGGCGGGGAG---------ACC------------------GGT------GTC---------------------------------CTG------------------------------------------------------------------TCGCCA------------------GCAGTTGGT---TTTGTTATCGGAATGGCCGGATGGCTTTACATCATCTACCTAATC---------------TTT------TTC---GGCGAGGCTAGTAAGGTTTCGGCAGAG------AGC---GGTAACGCGGCGAGT---CAA---ATG---GCG---TTC---TAT---TGGCTC---CGATTGATTGTTACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLIASVVMLLGGYGGE---T------G--V-----------L----------------------SP------AVG-FVIGMAGWLYIIYLI-----F--F-GEASKVSAE--S-GNAAS-Q-M-A-F-Y-WL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ929575 [I-Firmicutes-a] PRGD_OTU157_14db598ab13c77ff13abb532a7a7ac59 gb|KJ929575| PRGD_OTU157_14db598ab13c77ff13abb532a7a7ac59, putative proteorhodopsin gene, partial cds. PRGD_OTU157_14db598ab13c77ff13abb532a7a7ac59, putative proteorhodopsin gene, partial cds. KJ929575 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATCACAGTACCACTGCAAATCGTTGAATTTTATTTAATATTGGCTGCGGTGACCGCTGTTCGAACTGGATTATTCTGGCAGCTCTTAATCGCCTCTGTAGTAATGCTATTGGGAGGTTATGGCGGGGAGACCGGTGTCCTGTCGCCAGCAGTTGGTTTTGTTATTGGGATGGCCGGCTGGCTTTACATCATCTACCTAATCTTCTTCGGCGAGGCGAGTAAGGTTTCGGCAGAGAGTGGTAACGCGGCTAGTCAAATGGCGTTCTATTGGCTCCGATTGATTGTTACCGTC LITVPLQIVEFYLILAAVTAVRTGLFWQLLIASVVMLLGGYGGETGVLSPAVGFVIGMAGWLYIIYLIFFGEASKVSAESGNAASQMAFYWLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATCACAGTACCACTGCAAATCGTTGAATTTTATTTAATATTGGCTGCG---------GTG---ACCGCTGTTCGAACT---GGATTA------------------------------------TTCTGGCAG---CTCTTAATCGCCTCTGTAGTAATGCTATTGGGAGGTTATGGCGGGGAG---------ACC------------------GGT------GTC---------------------------------CTG------------------------------------------------------------------TCGCCA------------------GCAGTTGGT---TTTGTTATTGGGATGGCCGGCTGGCTTTACATCATCTACCTAATC---------------TTC------TTC---GGCGAGGCGAGTAAGGTTTCGGCAGAG------AGT---GGTAACGCGGCTAGT---CAA---ATG---GCG---TTC---TAT---TGGCTC---CGATTGATTGTTACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLIASVVMLLGGYGGE---T------G--V-----------L----------------------SP------AVG-FVIGMAGWLYIIYLI-----F--F-GEASKVSAE--S-GNAAS-Q-M-A-F-Y-WL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Firmicutes-a]_KJ929576 [I-Firmicutes-a] PRGD_OTU157_94dbaf502e3b6d91217780d9d167e227 gb|KJ929576| PRGD_OTU157_94dbaf502e3b6d91217780d9d167e227, putative proteorhodopsin gene, partial cds. PRGD_OTU157_94dbaf502e3b6d91217780d9d167e227, putative proteorhodopsin gene, partial cds. KJ929576 [[proteorhodopsin super-cluster I/Firmicutes-like cluster/A subcluster]] proteorhodopsin super-cluster I Firmicutes-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATCACTGTACCGCTCCAAATCGTTGAGTTTTACTTGATATTAGCTGCCGTAACCGCGGTGCGAACTGGATTATTCTGGCAGCTCTTGATTGCATCTGTCGTAATGCTCTTAGGAGGATATGGTGGGGAGACAGGTGTTCTGTCACCGGCAATTGGTTTTGTTATTGGTATGGCGGGATGGCTCTACATCATTTATCTAATATTTTTCGGCGAAGCGAGTAAAGTTTCGGCGGAGAGCGGTAACGCTGCGAGTCAAATGGCATTCTATTGGCTCCGATTAATCGTAACCGTT LITVPLQIVEFYLILAAVTAVRTGLFWQLLIASVVMLLGGYGGETGVLSPAIGFVIGMAGWLYIIYLIFFGEASKVSAESGNAASQMAFYWLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCGCTCCAAATCGTTGAGTTTTACTTGATATTAGCTGCC---------GTA---ACCGCGGTGCGAACT---GGATTA------------------------------------TTCTGGCAG---CTCTTGATTGCATCTGTCGTAATGCTCTTAGGAGGATATGGTGGGGAG---------ACA------------------GGT------GTT---------------------------------CTG------------------------------------------------------------------TCACCG------------------GCAATTGGT---TTTGTTATTGGTATGGCGGGATGGCTCTACATCATTTATCTAATA---------------TTT------TTC---GGCGAAGCGAGTAAAGTTTCGGCGGAG------AGC---GGTAACGCTGCGAGT---CAA---ATG---GCA---TTC---TAT---TGGCTC---CGATTAATCGTAACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TAVRT-GL------------FWQ-LLIASVVMLLGGYGGE---T------G--V-----------L----------------------SP------AIG-FVIGMAGWLYIIYLI-----F--F-GEASKVSAE--S-GNAAS-Q-M-A-F-Y-WL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927396 [I-Gamma2-a] PRGD_OTU009_4cfd818e6882b00702284525e0c57c38 gb|KJ927396| PRGD_OTU009_4cfd818e6882b00702284525e0c57c38, putative proteorhodopsin gene, partial cds. PRGD_OTU009_4cfd818e6882b00702284525e0c57c38, putative proteorhodopsin gene, partial cds. KJ927396 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTGTTAACAGTGCCACTGTTGATGGTGGAATTCTATTTGATTATGTCTGCTGTAGGTAAAGTACCAGGCCGCGTATTCTGGAATCTATTGGGCGGTACCACCGTAATGCTGATCTTCGGCTATATGGGTGAAGTCGGCTCTATGGGTGTGATGCCAGCATTCTTGCTGTCAATGGCCGCGTGGCTCTATGTAATTTGGTACATTATGAAAGGTGAAGCAAGTCAGGTAAATGCTAGCTTAGCCAATCCTAATGTTCAAAAAGCTTACAAGACCATGACATTCCTTGTGACTGTT LLTVPLLMVEFYLIMSAVGKVPGRVFWNLLGGTTVMLIFGYMGEVGSMGVMPAFLLSMAAWLYVIWYIMKGEASQVNASLANPNVQKAYKTMTFLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACAGTGCCACTGTTGATGGTGGAATTCTATTTGATTATGTCTGCT---------GTA---GGTAAAGTACCAGGC---CGCGTA------------------------------------TTCTGGAAT---CTATTGGGCGGTACCACCGTAATGCTGATCTTCGGCTATATGGGTGAA---------GTC------------------GGC------TCT---------------------------------ATG------------------------------------------------------------------GGTGTG------------------ATGCCAGCA---TTCTTGCTGTCAATGGCCGCGTGGCTCTATGTAATTTGGTACATT---------------ATG------AAA---GGTGAAGCAAGTCAGGTAAATGCTAGC------TTA---GCCAATCCTAATGTT---CAA---AAA---GCT---TAC---AAG---ACCATG---ACATTCCTTGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-RV------------FWN-LLGGTTVMLIFGYMGE---V------G--S-----------M----------------------GV------MPA-FLLSMAAWLYVIWYI-----M--K-GEASQVNAS--L-ANPNV-Q-K-A-Y-K-TM-TFLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927430 [I-Gamma2-a] PRGD_OTU009_c4471848676fe05b017e27465bfd6458 gb|KJ927430| PRGD_OTU009_c4471848676fe05b017e27465bfd6458, putative proteorhodopsin gene, partial cds. PRGD_OTU009_c4471848676fe05b017e27465bfd6458, putative proteorhodopsin gene, partial cds. KJ927430 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGTTAACAGTGCCACTGTTGATGGTGGAATTCTATTTGATTATGTCTGCTGTAGGTAAAGTACCAGGCCGCGTATTCTGGAATCTATTGGGCGGTACCACCGTAATGCTGATCTTCGGCTATATGGGTGAAGTCGGCTCTATGGGTGTGATGCCAGCATTCTTGCTGTCAATGGCCGCGTGGCTCTATGTAATTTGGTACATTATGAAAGGTGAAGCAAGTCAGGTAAATGCTAGCTTAGCCAATCCTAATGTTCAAAAAGCTTACAAGACCATGACATTCCTTGTGACTGTTGGTTGGGCTATCTATCCTCTCGGATACTTCATGGGTTACCTG LLTVPLLMVEFYLIMSAVGKVPGRVFWNLLGGTTVMLIFGYMGEVGSMGVMPAFLLSMAAWLYVIWYIMKGEASQVNASLANPNVQKAYKTMTFLVTVGWAIYPLGYFMGYL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACAGTGCCACTGTTGATGGTGGAATTCTATTTGATTATGTCTGCT---------GTA---GGTAAAGTACCAGGC---CGCGTA------------------------------------TTCTGGAAT---CTATTGGGCGGTACCACCGTAATGCTGATCTTCGGCTATATGGGTGAA---------GTC------------------GGC------TCT---------------------------------ATG------------------------------------------------------------------GGTGTG------------------ATGCCAGCA---TTCTTGCTGTCAATGGCCGCGTGGCTCTATGTAATTTGGTACATT---------------ATG------AAA---GGTGAAGCAAGTCAGGTAAATGCTAGC------TTA---GCCAATCCTAATGTT---CAA---AAA---GCT---TAC---AAG---ACCATG---ACATTCCTTGTGACTGTT---------------------------------------------------------------GGTTGG---------GCTATCTATCCTCTCGGATACTTCATGGGTTACCTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-RV------------FWN-LLGGTTVMLIFGYMGE---V------G--S-----------M----------------------GV------MPA-FLLSMAAWLYVIWYI-----M--K-GEASQVNAS--L-ANPNV-Q-K-A-Y-K-TM-TFLVTV---------------------GW---AIYPLGYFMGYL------------------------------------------------------------------------------------------ [I-Gamma2-a]_KJ927424 [I-Gamma2-a] PRGD_OTU009_b8b3b2024a3db76ab3acfcb1cdea882d gb|KJ927424| PRGD_OTU009_b8b3b2024a3db76ab3acfcb1cdea882d, putative proteorhodopsin gene, partial cds. PRGD_OTU009_b8b3b2024a3db76ab3acfcb1cdea882d, putative proteorhodopsin gene, partial cds. KJ927424 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683) CTGTTAACAGTGCCACTGTTGATGGTGGAATTCTATTTGATTATGTCTGCTGTAGGTAAAGTACCAGGCCGCGTATTCTGGAATCTATTGGGCGGTACCACCGTAATGCTGATCTTCGGCTATATGGGTGAAGTCGGCTCTATGGGTGTGATGCCAGCATTCTTGCTGTCAATGGCCGCGTGGCTCTATGTAATTTGGTACATTATGAAGGGTGAGGCAAGTCAAGTTAACGCTAGCTTGGCCAATCCTAATGTCCAGAAAGCATACAAGACCATGACATTCCTGGTGACTGTA LLTVPLLMVEFYLIMSAVGKVPGRVFWNLLGGTTVMLIFGYMGEVGSMGVMPAFLLSMAAWLYVIWYIMKGEASQVNASLANPNVQKAYKTMTFLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACAGTGCCACTGTTGATGGTGGAATTCTATTTGATTATGTCTGCT---------GTA---GGTAAAGTACCAGGC---CGCGTA------------------------------------TTCTGGAAT---CTATTGGGCGGTACCACCGTAATGCTGATCTTCGGCTATATGGGTGAA---------GTC------------------GGC------TCT---------------------------------ATG------------------------------------------------------------------GGTGTG------------------ATGCCAGCA---TTCTTGCTGTCAATGGCCGCGTGGCTCTATGTAATTTGGTACATT---------------ATG------AAG---GGTGAGGCAAGTCAAGTTAACGCTAGC------TTG---GCCAATCCTAATGTC---CAG---AAA---GCA---TAC---AAG---ACCATG---ACATTCCTGGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-RV------------FWN-LLGGTTVMLIFGYMGE---V------G--S-----------M----------------------GV------MPA-FLLSMAAWLYVIWYI-----M--K-GEASQVNAS--L-ANPNV-Q-K-A-Y-K-TM-TFLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927387 [I-Gamma2-a] PRGD_OTU009_31400df80ccf5bf9ed19e9f2943a305c gb|KJ927387| PRGD_OTU009_31400df80ccf5bf9ed19e9f2943a305c, putative proteorhodopsin gene, partial cds. PRGD_OTU009_31400df80ccf5bf9ed19e9f2943a305c, putative proteorhodopsin gene, partial cds. KJ927387 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683) CTCTTAACCGTGCCGCTGTTGATGGTTGAATTCTATCTGATTATGTCTGCAGTAGGTAAAGTTCCAGGCCGCGTATTCTGGAATCTATTGGGCGGTACCACCTTAATGCTGATCTTCGGCTATATGGGTGAGGTCGGCTCTATGGGTGTGATGCCAGCATTCTTGCTGTCAATGGCCGCTTGGCTGTATGTAATTTGGTACATTATGAAGGGTGAGGCAAGTCAAGTTAACGCTAGCTTGGCCAATCCTAATGTCCAGAAAGCATACAAGACCATGACATTCCTGGTGACTGTA LLTVPLLMVEFYLIMSAVGKVPGRVFWNLLGGTTLMLIFGYMGEVGSMGVMPAFLLSMAAWLYVIWYIMKGEASQVNASLANPNVQKAYKTMTFLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACCGTGCCGCTGTTGATGGTTGAATTCTATCTGATTATGTCTGCA---------GTA---GGTAAAGTTCCAGGC---CGCGTA------------------------------------TTCTGGAAT---CTATTGGGCGGTACCACCTTAATGCTGATCTTCGGCTATATGGGTGAG---------GTC------------------GGC------TCT---------------------------------ATG------------------------------------------------------------------GGTGTG------------------ATGCCAGCA---TTCTTGCTGTCAATGGCCGCTTGGCTGTATGTAATTTGGTACATT---------------ATG------AAG---GGTGAGGCAAGTCAAGTTAACGCTAGC------TTG---GCCAATCCTAATGTC---CAG---AAA---GCA---TAC---AAG---ACCATG---ACATTCCTGGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-RV------------FWN-LLGGTTLMLIFGYMGE---V------G--S-----------M----------------------GV------MPA-FLLSMAAWLYVIWYI-----M--K-GEASQVNAS--L-ANPNV-Q-K-A-Y-K-TM-TFLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927377 [I-Gamma2-a] PRGD_OTU009_otuREP_dc09c66ece5ee98843579073d765a8f9 gb|KJ927377| PRGD_OTU009_otuREP_dc09c66ece5ee98843579073d765a8f9, putative proteorhodopsin gene, partial cds. PRGD_OTU009_otuREP_dc09c66ece5ee98843579073d765a8f9, putative proteorhodopsin gene, partial cds. KJ927377 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTCTTAACCGTGCCGCTGTTGATGGTTGAATTCTATCTGATTATGTCTGCAGTAGGTAAAGTTCCAGGCCGCGTATTCTGGAATCTATTGGGCGGTACCACCTTAATGCTGATCTTCGGCTATATGGGTGAGGTCGGCTCTATGGGTGTGATGCCAGCATTCTTGCTGTCAATGGCCGCTTGGCTGTATGTAATTTGGTACATCATGAAAGGTGAAGCAAGTCAGGTTAATGCTAGCTTAGCCAATCCTAATGTTCAAAAAGCATACAAGACCATGACTTTCCTTGTGACTGTG LLTVPLLMVEFYLIMSAVGKVPGRVFWNLLGGTTLMLIFGYMGEVGSMGVMPAFLLSMAAWLYVIWYIMKGEASQVNASLANPNVQKAYKTMTFLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACCGTGCCGCTGTTGATGGTTGAATTCTATCTGATTATGTCTGCA---------GTA---GGTAAAGTTCCAGGC---CGCGTA------------------------------------TTCTGGAAT---CTATTGGGCGGTACCACCTTAATGCTGATCTTCGGCTATATGGGTGAG---------GTC------------------GGC------TCT---------------------------------ATG------------------------------------------------------------------GGTGTG------------------ATGCCAGCA---TTCTTGCTGTCAATGGCCGCTTGGCTGTATGTAATTTGGTACATC---------------ATG------AAA---GGTGAAGCAAGTCAGGTTAATGCTAGC------TTA---GCCAATCCTAATGTT---CAA---AAA---GCA---TAC---AAG---ACCATG---ACTTTCCTTGTGACTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-RV------------FWN-LLGGTTLMLIFGYMGE---V------G--S-----------M----------------------GV------MPA-FLLSMAAWLYVIWYI-----M--K-GEASQVNAS--L-ANPNV-Q-K-A-Y-K-TM-TFLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927397 [I-Gamma2-a] PRGD_OTU009_5392ab2a60d72f93a876cb3ecfe3efc5 gb|KJ927397| PRGD_OTU009_5392ab2a60d72f93a876cb3ecfe3efc5, putative proteorhodopsin gene, partial cds. PRGD_OTU009_5392ab2a60d72f93a876cb3ecfe3efc5, putative proteorhodopsin gene, partial cds. KJ927397 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 01-juil-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTGTTAACAGTGCCACTGTTGATGGTGGAATTCTATCTGATTATGTCTGCTGTAGGTAAAGTACCAGGCCGCGTATTCTGGAACCTATTGGGTGGTACCACCGTAATGCTGATTTTTGGCTATATGGGTGAGGTAGGATCCATGGGTGTGATGCCAGCATTCGTGCTGTCAATGATCGCTTGGCTCTATGTGATTTGGTACATCATGAAGGGTGAAGCAAGTCAGGTTAACGCCAGCCTGGCAAACCCCAACGTGCAAAAAGCGTACAAGACCATGACCTTCTTGGTGACTATT LLTVPLLMVEFYLIMSAVGKVPGRVFWNLLGGTTVMLIFGYMGEVGSMGVMPAFVLSMIAWLYVIWYIMKGEASQVNASLANPNVQKAYKTMTFLVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACAGTGCCACTGTTGATGGTGGAATTCTATCTGATTATGTCTGCT---------GTA---GGTAAAGTACCAGGC---CGCGTA------------------------------------TTCTGGAAC---CTATTGGGTGGTACCACCGTAATGCTGATTTTTGGCTATATGGGTGAG---------GTA------------------GGA------TCC---------------------------------ATG------------------------------------------------------------------GGTGTG------------------ATGCCAGCA---TTCGTGCTGTCAATGATCGCTTGGCTCTATGTGATTTGGTACATC---------------ATG------AAG---GGTGAAGCAAGTCAGGTTAACGCCAGC------CTG---GCAAACCCCAACGTG---CAA---AAA---GCG---TAC---AAG---ACCATG---ACCTTCTTGGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-RV------------FWN-LLGGTTVMLIFGYMGE---V------G--S-----------M----------------------GV------MPA-FVLSMIAWLYVIWYI-----M--K-GEASQVNAS--L-ANPNV-Q-K-A-Y-K-TM-TFLVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927381 [I-Gamma2-a] PRGD_OTU009_0bd3699925120f7dcaadc8c96aac2119 gb|KJ927381| PRGD_OTU009_0bd3699925120f7dcaadc8c96aac2119, putative proteorhodopsin gene, partial cds. PRGD_OTU009_0bd3699925120f7dcaadc8c96aac2119, putative proteorhodopsin gene, partial cds. KJ927381 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -33.9602, -73.3769) CTCTTGACCGTGCCACTGTTGATGGTTGAGTTCTATCTGATAATGTCGGCTGTGGGTAAGGTTCCGGGCCGCGTTTTCTGGAACCTACTGGGCGGTACCACAGTAATGTTGATATTCGGCTATATGGGCGAAACAGGCTCTATGGGCGTAATGCCAGCATTCTTGCTGTCTATGGCTGCTTGGATCTATGTAATCTGGTACATCATGAAAGGTGAAGCAAGCCAGGTTAATGCTAGCTTGGCCAATGCTAATGTACAGAAAGCATACAAGACCATGACATTCCTTGTGACTGTG LLTVPLLMVEFYLIMSAVGKVPGRVFWNLLGGTTVMLIFGYMGETGSMGVMPAFLLSMAAWIYVIWYIMKGEASQVNASLANANVQKAYKTMTFLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTGACCGTGCCACTGTTGATGGTTGAGTTCTATCTGATAATGTCGGCT---------GTG---GGTAAGGTTCCGGGC---CGCGTT------------------------------------TTCTGGAAC---CTACTGGGCGGTACCACAGTAATGTTGATATTCGGCTATATGGGCGAA---------ACA------------------GGC------TCT---------------------------------ATG------------------------------------------------------------------GGCGTA------------------ATGCCAGCA---TTCTTGCTGTCTATGGCTGCTTGGATCTATGTAATCTGGTACATC---------------ATG------AAA---GGTGAAGCAAGCCAGGTTAATGCTAGC------TTG---GCCAATGCTAATGTA---CAG---AAA---GCA---TAC---AAG---ACCATG---ACATTCCTTGTGACTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-RV------------FWN-LLGGTTVMLIFGYMGE---T------G--S-----------M----------------------GV------MPA-FLLSMAAWIYVIWYI-----M--K-GEASQVNAS--L-ANANV-Q-K-A-Y-K-TM-TFLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927393 [I-Gamma2-a] PRGD_OTU009_3b23e6508129a09a67c2267f2e27a3f1 gb|KJ927393| PRGD_OTU009_3b23e6508129a09a67c2267f2e27a3f1, putative proteorhodopsin gene, partial cds. PRGD_OTU009_3b23e6508129a09a67c2267f2e27a3f1, putative proteorhodopsin gene, partial cds. KJ927393 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) CTCTTAACCGTGCCACTGTTGATGGTTGAATTCTATTTAATCATGTCTGCTGTAGGCAAGGTACCAGGTCGCGTTTTCTGGAACCTATTGGGCGGTACCACCGTAATGCTGATCTTCGGCTACATGGGTGAGACTGGCTCCATGGGTGTTATGCCAGCATTCTTGCTGTCCATGGCTGCATGGATCTATGTAATTTGGTACATCATGAAAGGTGAAGCTAGTCAGGTTAATGCTAGTTTGGCTAATCCTAATGTTCAAAAAGCATATAAGACCATGACATTCCTTGTGACTGTG LLTVPLLMVEFYLIMSAVGKVPGRVFWNLLGGTTVMLIFGYMGETGSMGVMPAFLLSMAAWIYVIWYIMKGEASQVNASLANPNVQKAYKTMTFLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACCGTGCCACTGTTGATGGTTGAATTCTATTTAATCATGTCTGCT---------GTA---GGCAAGGTACCAGGT---CGCGTT------------------------------------TTCTGGAAC---CTATTGGGCGGTACCACCGTAATGCTGATCTTCGGCTACATGGGTGAG---------ACT------------------GGC------TCC---------------------------------ATG------------------------------------------------------------------GGTGTT------------------ATGCCAGCA---TTCTTGCTGTCCATGGCTGCATGGATCTATGTAATTTGGTACATC---------------ATG------AAA---GGTGAAGCTAGTCAGGTTAATGCTAGT------TTG---GCTAATCCTAATGTT---CAA---AAA---GCA---TAT---AAG---ACCATG---ACATTCCTTGTGACTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-RV------------FWN-LLGGTTVMLIFGYMGE---T------G--S-----------M----------------------GV------MPA-FLLSMAAWIYVIWYI-----M--K-GEASQVNAS--L-ANPNV-Q-K-A-Y-K-TM-TFLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927440 [I-Gamma2-a] PRGD_OTU009_fdeb70a1e92136fb42cb5c08865f5416 gb|KJ927440| PRGD_OTU009_fdeb70a1e92136fb42cb5c08865f5416, putative proteorhodopsin gene, partial cds. PRGD_OTU009_fdeb70a1e92136fb42cb5c08865f5416, putative proteorhodopsin gene, partial cds. KJ927440 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683) CTCTTAACCGTGCCTCTGTTGATGGTTGAGTTCTATTTGATTATGTCTGCTGTAGGTAAAGTACCGGGCCGCGTATTCTGGAACCTCCTGGGCGGTACCACCGTAATGCTGATCTTCGGCTATATGGGTGAGACTGGCTCTATGGGTGTTATGCCAGCATTCGTGCTGTCAATGGCCGCTTGGCTCTATGTAATTTGGTACATCATGAAAGGTGAAGCAAGTCAGGTTAATGCTAGCTTAGCCAATCCTAATGTTCAAAAAGCATACAAGACCATGACTTTCCTTGTGACTGTG LLTVPLLMVEFYLIMSAVGKVPGRVFWNLLGGTTVMLIFGYMGETGSMGVMPAFVLSMAAWLYVIWYIMKGEASQVNASLANPNVQKAYKTMTFLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACCGTGCCTCTGTTGATGGTTGAGTTCTATTTGATTATGTCTGCT---------GTA---GGTAAAGTACCGGGC---CGCGTA------------------------------------TTCTGGAAC---CTCCTGGGCGGTACCACCGTAATGCTGATCTTCGGCTATATGGGTGAG---------ACT------------------GGC------TCT---------------------------------ATG------------------------------------------------------------------GGTGTT------------------ATGCCAGCA---TTCGTGCTGTCAATGGCCGCTTGGCTCTATGTAATTTGGTACATC---------------ATG------AAA---GGTGAAGCAAGTCAGGTTAATGCTAGC------TTA---GCCAATCCTAATGTT---CAA---AAA---GCA---TAC---AAG---ACCATG---ACTTTCCTTGTGACTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-RV------------FWN-LLGGTTVMLIFGYMGE---T------G--S-----------M----------------------GV------MPA-FVLSMAAWLYVIWYI-----M--K-GEASQVNAS--L-ANPNV-Q-K-A-Y-K-TM-TFLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927379 [I-Gamma2-a] PRGD_OTU009_065b84927caf8e7d760e7f605b2ec52b gb|KJ927379| PRGD_OTU009_065b84927caf8e7d760e7f605b2ec52b, putative proteorhodopsin gene, partial cds. PRGD_OTU009_065b84927caf8e7d760e7f605b2ec52b, putative proteorhodopsin gene, partial cds. KJ927379 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTCTTAACCGTGCCTCTGTTGATGGTTGAGTTCTATTTGATTATGTCTGCTGTAGGTAAAGTACCGGGCCGCGTATTCTGGAACCTCCTGGGCGGTACCACCGTAATGCTGATCTTCGGCTATATGGGTGAGACTGGCTCTATGGGTGTTATGCCAGCATTCGTGCTGTCAATGGCCGCTTGGCTCTATGTAATTTGGTACATTATGAAGGGTGAGGCAAGTCAAGTTAACGCTAGCTTGGCCAATCCTAATGTCCAGAAAGCATACAAGACCATGACATTCCTGGTGACTGTA LLTVPLLMVEFYLIMSAVGKVPGRVFWNLLGGTTVMLIFGYMGETGSMGVMPAFVLSMAAWLYVIWYIMKGEASQVNASLANPNVQKAYKTMTFLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACCGTGCCTCTGTTGATGGTTGAGTTCTATTTGATTATGTCTGCT---------GTA---GGTAAAGTACCGGGC---CGCGTA------------------------------------TTCTGGAAC---CTCCTGGGCGGTACCACCGTAATGCTGATCTTCGGCTATATGGGTGAG---------ACT------------------GGC------TCT---------------------------------ATG------------------------------------------------------------------GGTGTT------------------ATGCCAGCA---TTCGTGCTGTCAATGGCCGCTTGGCTCTATGTAATTTGGTACATT---------------ATG------AAG---GGTGAGGCAAGTCAAGTTAACGCTAGC------TTG---GCCAATCCTAATGTC---CAG---AAA---GCA---TAC---AAG---ACCATG---ACATTCCTGGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-RV------------FWN-LLGGTTVMLIFGYMGE---T------G--S-----------M----------------------GV------MPA-FVLSMAAWLYVIWYI-----M--K-GEASQVNAS--L-ANPNV-Q-K-A-Y-K-TM-TFLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927437 [I-Gamma2-a] PRGD_OTU009_e3fb6a8742d94e329bf28f603b3222b7 gb|KJ927437| PRGD_OTU009_e3fb6a8742d94e329bf28f603b3222b7, putative proteorhodopsin gene, partial cds. PRGD_OTU009_e3fb6a8742d94e329bf28f603b3222b7, putative proteorhodopsin gene, partial cds. KJ927437 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683) CTGTTAACAGTGCCACTGTTGATGGTGGAATTCTATTTGATTATGTCTGCTGTAGGTAAAGTACCGGGCCGCGTATTCTGGAACCTCCTGGGCGGTACCACCGTAATGCTGATCTTCGGCTATATGGGTGAGACTGGCTCTATGGGTGTTATGCCAGCATTCGTGCTGTCAATGGCCGCTTGGCTCTATGTAATTTGGTACATTATGAAGGGTGAGGCAAGTCAAGTTAACGCTAGCTTGGCCAATCCTAATGTCCAGAAAGCATACAAGACCATGACATTCCTGGTGACTGTA LLTVPLLMVEFYLIMSAVGKVPGRVFWNLLGGTTVMLIFGYMGETGSMGVMPAFVLSMAAWLYVIWYIMKGEASQVNASLANPNVQKAYKTMTFLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACAGTGCCACTGTTGATGGTGGAATTCTATTTGATTATGTCTGCT---------GTA---GGTAAAGTACCGGGC---CGCGTA------------------------------------TTCTGGAAC---CTCCTGGGCGGTACCACCGTAATGCTGATCTTCGGCTATATGGGTGAG---------ACT------------------GGC------TCT---------------------------------ATG------------------------------------------------------------------GGTGTT------------------ATGCCAGCA---TTCGTGCTGTCAATGGCCGCTTGGCTCTATGTAATTTGGTACATT---------------ATG------AAG---GGTGAGGCAAGTCAAGTTAACGCTAGC------TTG---GCCAATCCTAATGTC---CAG---AAA---GCA---TAC---AAG---ACCATG---ACATTCCTGGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-RV------------FWN-LLGGTTVMLIFGYMGE---T------G--S-----------M----------------------GV------MPA-FVLSMAAWLYVIWYI-----M--K-GEASQVNAS--L-ANPNV-Q-K-A-Y-K-TM-TFLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927385 [I-Gamma2-a] PRGD_OTU009_284f478e28f001b919a4d2cd97cbf8ba gb|KJ927385| PRGD_OTU009_284f478e28f001b919a4d2cd97cbf8ba, putative proteorhodopsin gene, partial cds. PRGD_OTU009_284f478e28f001b919a4d2cd97cbf8ba, putative proteorhodopsin gene, partial cds. KJ927385 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683) CTGTTAACAGTGCCACTGTTGATGGTGGAATTCTATCTGATTATGTCTGCTGTAGGTAAAGTACCAGGCCGCGTATTCTGGAACCTTCTAGGCGGTACCACCGTGATGCTGATCTTCGGCTACATGGGTGAGACTGGCTACATGGGTGTAGCCCCAGCGTTCGCTCTGTCGATGGCAGCTTGGTTATATGTAATTTGGTACATTATGAAAGGCGAAGCAAGCCAGGTTAATGCCAGCTTGGCAAACCCCAATGTTCAAAAAGCATATAAGACAATGACATTCCTTGTGACTGTT LLTVPLLMVEFYLIMSAVGKVPGRVFWNLLGGTTVMLIFGYMGETGYMGVAPAFALSMAAWLYVIWYIMKGEASQVNASLANPNVQKAYKTMTFLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACAGTGCCACTGTTGATGGTGGAATTCTATCTGATTATGTCTGCT---------GTA---GGTAAAGTACCAGGC---CGCGTA------------------------------------TTCTGGAAC---CTTCTAGGCGGTACCACCGTGATGCTGATCTTCGGCTACATGGGTGAG---------ACT------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GGTGTA------------------GCCCCAGCG---TTCGCTCTGTCGATGGCAGCTTGGTTATATGTAATTTGGTACATT---------------ATG------AAA---GGCGAAGCAAGCCAGGTTAATGCCAGC------TTG---GCAAACCCCAATGTT---CAA---AAA---GCA---TAT---AAG---ACAATG---ACATTCCTTGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-RV------------FWN-LLGGTTVMLIFGYMGE---T------G--Y-----------M----------------------GV------APA-FALSMAAWLYVIWYI-----M--K-GEASQVNAS--L-ANPNV-Q-K-A-Y-K-TM-TFLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927411 [I-Gamma2-a] PRGD_OTU009_8e709b89d176768ca0b9319170334ca6 gb|KJ927411| PRGD_OTU009_8e709b89d176768ca0b9319170334ca6, putative proteorhodopsin gene, partial cds. PRGD_OTU009_8e709b89d176768ca0b9319170334ca6, putative proteorhodopsin gene, partial cds. KJ927411 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTGTTAACAGTGCCACTGTTGATGGTGGAATTCTATCTGATTATGTCTGCTGTGGGTAAAGTACCAGGCCGCGTATTCTGGAACCTTCTAGGCGGTACCACCGTGATGCTGATCTTCGGCTACATGGGTGAGACTGGCTACATGGGTGTAGCCCCAGCGTTCGCTCTGTCGATGGCAGCTTGGATATATGTAATTTGGTACATTATGAAAGGTGAAGCAAGCCAGGTTAATGCCAGCTTGGCAAACCCCAATGTTCAAAAAGCATATAAGACAATGACATTCCTTGTGACTGTT LLTVPLLMVEFYLIMSAVGKVPGRVFWNLLGGTTVMLIFGYMGETGYMGVAPAFALSMAAWIYVIWYIMKGEASQVNASLANPNVQKAYKTMTFLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACAGTGCCACTGTTGATGGTGGAATTCTATCTGATTATGTCTGCT---------GTG---GGTAAAGTACCAGGC---CGCGTA------------------------------------TTCTGGAAC---CTTCTAGGCGGTACCACCGTGATGCTGATCTTCGGCTACATGGGTGAG---------ACT------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GGTGTA------------------GCCCCAGCG---TTCGCTCTGTCGATGGCAGCTTGGATATATGTAATTTGGTACATT---------------ATG------AAA---GGTGAAGCAAGCCAGGTTAATGCCAGC------TTG---GCAAACCCCAATGTT---CAA---AAA---GCA---TAT---AAG---ACAATG---ACATTCCTTGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-RV------------FWN-LLGGTTVMLIFGYMGE---T------G--Y-----------M----------------------GV------APA-FALSMAAWIYVIWYI-----M--K-GEASQVNAS--L-ANPNV-Q-K-A-Y-K-TM-TFLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927402 [I-Gamma2-a] PRGD_OTU009_657828c9f77c00dd3defb183f7cd2936 gb|KJ927402| PRGD_OTU009_657828c9f77c00dd3defb183f7cd2936, putative proteorhodopsin gene, partial cds. PRGD_OTU009_657828c9f77c00dd3defb183f7cd2936, putative proteorhodopsin gene, partial cds. KJ927402 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683) CTCTTAACAGTGCCGCTGTTGATGGTTGAATTCTATCTGATTATGTCTGCTGTAGGTAAAGTACCTGGCCGCGTTTTCTGGAACCTGCTTGGTGGTACTACTGTAATGTTAATCTTCGGCTACATGGGCGAAGTAGGCACTATGGGCGTTGCTCCAGCATTTGCTCTATCAATGGCAGCTTGGTTATATGTGATTTGGTACATTATGAAAGGTGAAGCGAGCAAGGTTAACGCCAGCTTAGCAAACCCTAATGTTCAAAAAGCTTACAAGACAATGACATTCCTTGTGACTGTT LLTVPLLMVEFYLIMSAVGKVPGRVFWNLLGGTTVMLIFGYMGEVGTMGVAPAFALSMAAWLYVIWYIMKGEASKVNASLANPNVQKAYKTMTFLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACAGTGCCGCTGTTGATGGTTGAATTCTATCTGATTATGTCTGCT---------GTA---GGTAAAGTACCTGGC---CGCGTT------------------------------------TTCTGGAAC---CTGCTTGGTGGTACTACTGTAATGTTAATCTTCGGCTACATGGGCGAA---------GTA------------------GGC------ACT---------------------------------ATG------------------------------------------------------------------GGCGTT------------------GCTCCAGCA---TTTGCTCTATCAATGGCAGCTTGGTTATATGTGATTTGGTACATT---------------ATG------AAA---GGTGAAGCGAGCAAGGTTAACGCCAGC------TTA---GCAAACCCTAATGTT---CAA---AAA---GCT---TAC---AAG---ACAATG---ACATTCCTTGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-RV------------FWN-LLGGTTVMLIFGYMGE---V------G--T-----------M----------------------GV------APA-FALSMAAWLYVIWYI-----M--K-GEASKVNAS--L-ANPNV-Q-K-A-Y-K-TM-TFLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927389 [I-Gamma2-a] PRGD_OTU009_38e01beea36bb807115fdf84943b7291 gb|KJ927389| PRGD_OTU009_38e01beea36bb807115fdf84943b7291, putative proteorhodopsin gene, partial cds. PRGD_OTU009_38e01beea36bb807115fdf84943b7291, putative proteorhodopsin gene, partial cds. KJ927389 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781), Indian Ocean (-33.28, 45.35) CTGCTAACTGTGCCGCTGTTGATGGTTGAGTTCTACTTGATTATGTCTGCAGTAGGTAAGGTACCAGGACGTGTATTCTGGAACCTGCTAGGTGGTACTACATTAATGCTGATCTTCGGCTATATGGGTGAAACTGGCTCGATGGGTGTGGGCCTCGCGTTCGCTCTGTCAATGGCAGCATGGATTTATGTAATTTGGTACATTATGAAAGGTGAGGCTAGTCAGGTTAATGCTAGCTTGGCAAATCCTAATGTCCAAAAAGCCTACAAGACCATGACATTCCTGGTAACCGTA LLTVPLLMVEFYLIMSAVGKVPGRVFWNLLGGTTLMLIFGYMGETGSMGVGLAFALSMAAWIYVIWYIMKGEASQVNASLANPNVQKAYKTMTFLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTAACTGTGCCGCTGTTGATGGTTGAGTTCTACTTGATTATGTCTGCA---------GTA---GGTAAGGTACCAGGA---CGTGTA------------------------------------TTCTGGAAC---CTGCTAGGTGGTACTACATTAATGCTGATCTTCGGCTATATGGGTGAA---------ACT------------------GGC------TCG---------------------------------ATG------------------------------------------------------------------GGTGTG------------------GGCCTCGCG---TTCGCTCTGTCAATGGCAGCATGGATTTATGTAATTTGGTACATT---------------ATG------AAA---GGTGAGGCTAGTCAGGTTAATGCTAGC------TTG---GCAAATCCTAATGTC---CAA---AAA---GCC---TAC---AAG---ACCATG---ACATTCCTGGTAACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-RV------------FWN-LLGGTTLMLIFGYMGE---T------G--S-----------M----------------------GV------GLA-FALSMAAWIYVIWYI-----M--K-GEASQVNAS--L-ANPNV-Q-K-A-Y-K-TM-TFLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927404 [I-Gamma2-a] PRGD_OTU009_7156774a784dccb7c68bd44ad0b97e45 gb|KJ927404| PRGD_OTU009_7156774a784dccb7c68bd44ad0b97e45, putative proteorhodopsin gene, partial cds. PRGD_OTU009_7156774a784dccb7c68bd44ad0b97e45, putative proteorhodopsin gene, partial cds. KJ927404 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGCTAACTGTGCCGCTGTTGATGGTTGAGTTCTACTTGATTATGTCTGCAGTAGGTAAGGTACCAGCACGTGTATTCTGGAACCTGCTAGGTGGTACTACAATAATGCTGATCTTCGGCTACATGGGCGAAACTGGCTCGATGGGTGTGGGCCTCGCGTTCGCTCTGTCAATGGCAGCATGGATTTATGTAATTTGGTACATTATGAAAGGTGAGGCTAGTCAGGTTAATGCTAGCTTGGCAAATCCTAATGTCCAAAAAGCCTACAAGACCATGACATTCCTGGTAACCGTA LLTVPLLMVEFYLIMSAVGKVPARVFWNLLGGTTIMLIFGYMGETGSMGVGLAFALSMAAWIYVIWYIMKGEASQVNASLANPNVQKAYKTMTFLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTAACTGTGCCGCTGTTGATGGTTGAGTTCTACTTGATTATGTCTGCA---------GTA---GGTAAGGTACCAGCA---CGTGTA------------------------------------TTCTGGAAC---CTGCTAGGTGGTACTACAATAATGCTGATCTTCGGCTACATGGGCGAA---------ACT------------------GGC------TCG---------------------------------ATG------------------------------------------------------------------GGTGTG------------------GGCCTCGCG---TTCGCTCTGTCAATGGCAGCATGGATTTATGTAATTTGGTACATT---------------ATG------AAA---GGTGAGGCTAGTCAGGTTAATGCTAGC------TTG---GCAAATCCTAATGTC---CAA---AAA---GCC---TAC---AAG---ACCATG---ACATTCCTGGTAACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPA-RV------------FWN-LLGGTTIMLIFGYMGE---T------G--S-----------M----------------------GV------GLA-FALSMAAWIYVIWYI-----M--K-GEASQVNAS--L-ANPNV-Q-K-A-Y-K-TM-TFLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927418 [I-Gamma2-a] PRGD_OTU009_9e9efece8fc61d8e59f6f4f5ebdc2bae gb|KJ927418| PRGD_OTU009_9e9efece8fc61d8e59f6f4f5ebdc2bae, putative proteorhodopsin gene, partial cds. PRGD_OTU009_9e9efece8fc61d8e59f6f4f5ebdc2bae, putative proteorhodopsin gene, partial cds. KJ927418 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGCTAACTGTGCCGCTGTTGATGGTTGAGTTCTACTTGATTATGTCTGCAGTAGGTAAGGTACCAGCACGTGTATTCTGGAACCTGCTAGGTGGTACTACAATAATGCTGATCTTCGGCTACATGGGCGAAACTGGCTCGATGGGTGTGGGCCTCGCGTTCGCTCTGTCAATGGCAGCTTGGCTATATGTAATTTGGTACATTATGAAAGGTGAGGCTAGTCAGGTTAATGCTAGCTTGGCAAATCCTAATGTCCAAAAAGCCTACAAGACCATGACATTCCTGGTAACCGTA LLTVPLLMVEFYLIMSAVGKVPARVFWNLLGGTTIMLIFGYMGETGSMGVGLAFALSMAAWLYVIWYIMKGEASQVNASLANPNVQKAYKTMTFLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTAACTGTGCCGCTGTTGATGGTTGAGTTCTACTTGATTATGTCTGCA---------GTA---GGTAAGGTACCAGCA---CGTGTA------------------------------------TTCTGGAAC---CTGCTAGGTGGTACTACAATAATGCTGATCTTCGGCTACATGGGCGAA---------ACT------------------GGC------TCG---------------------------------ATG------------------------------------------------------------------GGTGTG------------------GGCCTCGCG---TTCGCTCTGTCAATGGCAGCTTGGCTATATGTAATTTGGTACATT---------------ATG------AAA---GGTGAGGCTAGTCAGGTTAATGCTAGC------TTG---GCAAATCCTAATGTC---CAA---AAA---GCC---TAC---AAG---ACCATG---ACATTCCTGGTAACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPA-RV------------FWN-LLGGTTIMLIFGYMGE---T------G--S-----------M----------------------GV------GLA-FALSMAAWLYVIWYI-----M--K-GEASQVNAS--L-ANPNV-Q-K-A-Y-K-TM-TFLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927399 [I-Gamma2-a] PRGD_OTU009_5be594e23ea977cda9dee23c7806c7e2 gb|KJ927399| PRGD_OTU009_5be594e23ea977cda9dee23c7806c7e2, putative proteorhodopsin gene, partial cds. PRGD_OTU009_5be594e23ea977cda9dee23c7806c7e2, putative proteorhodopsin gene, partial cds. KJ927399 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) CTGCTAACTGTGCCGCTGTTGATGGTTGAGTTCTACTTGATTATGTCTGCAGTAGGTAAGGTACCAGCACGTGTATTCTGGAACCTGCTAGGTGGTACTACAATAATGCTGATCTTCGGCTACATGGGCGAAACTGGCTCGATGGGTGTGGGCCTCGCGTTCGCTCTGTCAATGGCAGCTTGGCTATATGTAATTTGGTACATTATAAAAGGTGAAGCGAGTCAGGTTAATGCTAGCTTGGCAAATCCTAATGTCCAAAAAGCCTACAAGACTATGACATTCCTGGTAACAGTA LLTVPLLMVEFYLIMSAVGKVPARVFWNLLGGTTIMLIFGYMGETGSMGVGLAFALSMAAWLYVIWYIIKGEASQVNASLANPNVQKAYKTMTFLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTAACTGTGCCGCTGTTGATGGTTGAGTTCTACTTGATTATGTCTGCA---------GTA---GGTAAGGTACCAGCA---CGTGTA------------------------------------TTCTGGAAC---CTGCTAGGTGGTACTACAATAATGCTGATCTTCGGCTACATGGGCGAA---------ACT------------------GGC------TCG---------------------------------ATG------------------------------------------------------------------GGTGTG------------------GGCCTCGCG---TTCGCTCTGTCAATGGCAGCTTGGCTATATGTAATTTGGTACATT---------------ATA------AAA---GGTGAAGCGAGTCAGGTTAATGCTAGC------TTG---GCAAATCCTAATGTC---CAA---AAA---GCC---TAC---AAG---ACTATG---ACATTCCTGGTAACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPA-RV------------FWN-LLGGTTIMLIFGYMGE---T------G--S-----------M----------------------GV------GLA-FALSMAAWLYVIWYI-----I--K-GEASQVNAS--L-ANPNV-Q-K-A-Y-K-TM-TFLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927386 [I-Gamma2-a] PRGD_OTU009_2ea33dbb3a6d55adab3b0416d0916e09 gb|KJ927386| PRGD_OTU009_2ea33dbb3a6d55adab3b0416d0916e09, putative proteorhodopsin gene, partial cds. PRGD_OTU009_2ea33dbb3a6d55adab3b0416d0916e09, putative proteorhodopsin gene, partial cds. KJ927386 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) CTGCTAACTGTGCCGCTGTTGATGGTTGAGTTCTACTTAATCATGTCTGCAGTAGGCAAGGTACCAGCTCGTGTATTTTGGAACCTGTTAGGCGGTACCACAATAATGCTGATCTTTGGCTACATGGGCGAAACTGGCTCAATGGGTGTGGGCCTCGCGTTCGCTCTGTCAATGGCAGCATGGTTATATGTAATTTGGTACATCATCAAAGGTGAAGCGAGCCAGGTTAACGCCAGCTTAGCAAATCCAAATGTTCAAAAAGCCTATAAGACGATGACATTCCTCGTAACAGTA LLTVPLLMVEFYLIMSAVGKVPARVFWNLLGGTTIMLIFGYMGETGSMGVGLAFALSMAAWLYVIWYIIKGEASQVNASLANPNVQKAYKTMTFLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTAACTGTGCCGCTGTTGATGGTTGAGTTCTACTTAATCATGTCTGCA---------GTA---GGCAAGGTACCAGCT---CGTGTA------------------------------------TTTTGGAAC---CTGTTAGGCGGTACCACAATAATGCTGATCTTTGGCTACATGGGCGAA---------ACT------------------GGC------TCA---------------------------------ATG------------------------------------------------------------------GGTGTG------------------GGCCTCGCG---TTCGCTCTGTCAATGGCAGCATGGTTATATGTAATTTGGTACATC---------------ATC------AAA---GGTGAAGCGAGCCAGGTTAACGCCAGC------TTA---GCAAATCCAAATGTT---CAA---AAA---GCC---TAT---AAG---ACGATG---ACATTCCTCGTAACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPA-RV------------FWN-LLGGTTIMLIFGYMGE---T------G--S-----------M----------------------GV------GLA-FALSMAAWLYVIWYI-----I--K-GEASQVNAS--L-ANPNV-Q-K-A-Y-K-TM-TFLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927425 [I-Gamma2-a] PRGD_OTU009_ba02da971cca456379214d4c4bba684a gb|KJ927425| PRGD_OTU009_ba02da971cca456379214d4c4bba684a, putative proteorhodopsin gene, partial cds. PRGD_OTU009_ba02da971cca456379214d4c4bba684a, putative proteorhodopsin gene, partial cds. KJ927425 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGCTAACTGTGCCGCTGTTGATGGTTGAGTTCTACTTAATCATGTCTGCAGTAGGCAAGGTACCAGCTCGTGTATTTTGGAACCTGTTAGGCGGTACCACAATAATGCTGATCTTTGGCTACATGGGCGAAACTGGCTCAATGGGTGTGACCCTCGCGTTCGCTCTGTCAATGGCAGCATGGTTATATGTAATTTGGTACATCATCAAAGGTGAAGCGAGCCAAGTTAACGCCAGCTTAGCAAATCCAAATGTTCAAAAAGCCTATAAGACGATGACATTCCTCGTAACAGTA LLTVPLLMVEFYLIMSAVGKVPARVFWNLLGGTTIMLIFGYMGETGSMGVTLAFALSMAAWLYVIWYIIKGEASQVNASLANPNVQKAYKTMTFLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTAACTGTGCCGCTGTTGATGGTTGAGTTCTACTTAATCATGTCTGCA---------GTA---GGCAAGGTACCAGCT---CGTGTA------------------------------------TTTTGGAAC---CTGTTAGGCGGTACCACAATAATGCTGATCTTTGGCTACATGGGCGAA---------ACT------------------GGC------TCA---------------------------------ATG------------------------------------------------------------------GGTGTG------------------ACCCTCGCG---TTCGCTCTGTCAATGGCAGCATGGTTATATGTAATTTGGTACATC---------------ATC------AAA---GGTGAAGCGAGCCAAGTTAACGCCAGC------TTA---GCAAATCCAAATGTT---CAA---AAA---GCC---TAT---AAG---ACGATG---ACATTCCTCGTAACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPA-RV------------FWN-LLGGTTIMLIFGYMGE---T------G--S-----------M----------------------GV------TLA-FALSMAAWLYVIWYI-----I--K-GEASQVNAS--L-ANPNV-Q-K-A-Y-K-TM-TFLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927433 [I-Gamma2-a] PRGD_OTU009_cfc357bb5ac6a7780a6997c901bbe640 gb|KJ927433| PRGD_OTU009_cfc357bb5ac6a7780a6997c901bbe640, putative proteorhodopsin gene, partial cds. PRGD_OTU009_cfc357bb5ac6a7780a6997c901bbe640, putative proteorhodopsin gene, partial cds. KJ927433 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683) CTGCTAACTGTGCCGCTGTTGATGGTTGAGTTCTACTTGATTATGTCTGCAGTAGGTAAGGTACCAGCACGTGTATTCTGGAACCTGCTAGGTGGTACTACATTGATGCTGATCTTCGGCTATATGGGCGAAACTGGCTCGATGGGTGTGGGCCTCGCGTTCGCTCTGTCAATGGCAGCATGGATCTATGTAATTTGGTACATTATGAAAGGTGAGGCCAGTCAGGTTAATGCTAGCTTGGCAAATCCTAATGTCCAAAAAGCCTACAAGACTATGACATTCCTAGTAACAGTA LLTVPLLMVEFYLIMSAVGKVPARVFWNLLGGTTLMLIFGYMGETGSMGVGLAFALSMAAWIYVIWYIMKGEASQVNASLANPNVQKAYKTMTFLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTAACTGTGCCGCTGTTGATGGTTGAGTTCTACTTGATTATGTCTGCA---------GTA---GGTAAGGTACCAGCA---CGTGTA------------------------------------TTCTGGAAC---CTGCTAGGTGGTACTACATTGATGCTGATCTTCGGCTATATGGGCGAA---------ACT------------------GGC------TCG---------------------------------ATG------------------------------------------------------------------GGTGTG------------------GGCCTCGCG---TTCGCTCTGTCAATGGCAGCATGGATCTATGTAATTTGGTACATT---------------ATG------AAA---GGTGAGGCCAGTCAGGTTAATGCTAGC------TTG---GCAAATCCTAATGTC---CAA---AAA---GCC---TAC---AAG---ACTATG---ACATTCCTAGTAACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPA-RV------------FWN-LLGGTTLMLIFGYMGE---T------G--S-----------M----------------------GV------GLA-FALSMAAWIYVIWYI-----M--K-GEASQVNAS--L-ANPNV-Q-K-A-Y-K-TM-TFLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927383 [I-Gamma2-a] PRGD_OTU009_0db3e7d63b3aea7c64395cd044c11eca gb|KJ927383| PRGD_OTU009_0db3e7d63b3aea7c64395cd044c11eca, putative proteorhodopsin gene, partial cds. PRGD_OTU009_0db3e7d63b3aea7c64395cd044c11eca, putative proteorhodopsin gene, partial cds. KJ927383 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) CTGCTAACTGTGCCGCTGTTGATGGTTGAGTTCTACTTGATTATGTCTGCAGTAGGTAAGGTACCAGCACGTGTATTCTGGAACCTGCTAGGTGGTACTACATTGATGCTGATCTTCGGCTACATGGGCGAAACTGGCTCGATGGGTGTGGGCCTCGCGTTCGCTCTGTCAATGGCAGCATGGATCTATGTAATTTGGTACATTATAAAAGGTGAAGCCAGTCAGGTTAACGCTAGTTTGGCAAATCCTAATGTCCAAAAAGCCTACAAGACTATGACATTCCTAGTAACAGTA LLTVPLLMVEFYLIMSAVGKVPARVFWNLLGGTTLMLIFGYMGETGSMGVGLAFALSMAAWIYVIWYIIKGEASQVNASLANPNVQKAYKTMTFLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTAACTGTGCCGCTGTTGATGGTTGAGTTCTACTTGATTATGTCTGCA---------GTA---GGTAAGGTACCAGCA---CGTGTA------------------------------------TTCTGGAAC---CTGCTAGGTGGTACTACATTGATGCTGATCTTCGGCTACATGGGCGAA---------ACT------------------GGC------TCG---------------------------------ATG------------------------------------------------------------------GGTGTG------------------GGCCTCGCG---TTCGCTCTGTCAATGGCAGCATGGATCTATGTAATTTGGTACATT---------------ATA------AAA---GGTGAAGCCAGTCAGGTTAACGCTAGT------TTG---GCAAATCCTAATGTC---CAA---AAA---GCC---TAC---AAG---ACTATG---ACATTCCTAGTAACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPA-RV------------FWN-LLGGTTLMLIFGYMGE---T------G--S-----------M----------------------GV------GLA-FALSMAAWIYVIWYI-----I--K-GEASQVNAS--L-ANPNV-Q-K-A-Y-K-TM-TFLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927382 [I-Gamma2-a] PRGD_OTU009_0be1c30ac340cce2d3cc2cef3bdd21c7 gb|KJ927382| PRGD_OTU009_0be1c30ac340cce2d3cc2cef3bdd21c7, putative proteorhodopsin gene, partial cds. PRGD_OTU009_0be1c30ac340cce2d3cc2cef3bdd21c7, putative proteorhodopsin gene, partial cds. KJ927382 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) CTACTAACTGTGCCGCTGTTGATGGTTGAATTCTATTTAATTATGTCAGCAGTAGGTAAAGTGCCAGGGCGAGTGTTCTGGAACCTCCTAGGTGGTACTACATTGATGCTGATCTTCGGCTATATGGGCGAAACTGGCTCTATGGGTGTGGGCCTTGCGTTCGCTCTATCTATGGCAGCTTGGATCTATGTCATCTGGTACATCATGAAAGGTGAAGCCAGTCAGGTGAATGCTAGCTTGGCAAATCCTAATGTCCAAAAAGCGTACAAGACCATGACATTCTTGGTCACTGTA LLTVPLLMVEFYLIMSAVGKVPGRVFWNLLGGTTLMLIFGYMGETGSMGVGLAFALSMAAWIYVIWYIMKGEASQVNASLANPNVQKAYKTMTFLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTAACTGTGCCGCTGTTGATGGTTGAATTCTATTTAATTATGTCAGCA---------GTA---GGTAAAGTGCCAGGG---CGAGTG------------------------------------TTCTGGAAC---CTCCTAGGTGGTACTACATTGATGCTGATCTTCGGCTATATGGGCGAA---------ACT------------------GGC------TCT---------------------------------ATG------------------------------------------------------------------GGTGTG------------------GGCCTTGCG---TTCGCTCTATCTATGGCAGCTTGGATCTATGTCATCTGGTACATC---------------ATG------AAA---GGTGAAGCCAGTCAGGTGAATGCTAGC------TTG---GCAAATCCTAATGTC---CAA---AAA---GCG---TAC---AAG---ACCATG---ACATTCTTGGTCACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-RV------------FWN-LLGGTTLMLIFGYMGE---T------G--S-----------M----------------------GV------GLA-FALSMAAWIYVIWYI-----M--K-GEASQVNAS--L-ANPNV-Q-K-A-Y-K-TM-TFLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927394 [I-Gamma2-a] PRGD_OTU009_3d10dafbdfa694a94d16192c8bfbfbfd gb|KJ927394| PRGD_OTU009_3d10dafbdfa694a94d16192c8bfbfbfd, putative proteorhodopsin gene, partial cds. PRGD_OTU009_3d10dafbdfa694a94d16192c8bfbfbfd, putative proteorhodopsin gene, partial cds. KJ927394 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) TTATTGACCGTGCCACTGTTGATGGTTGAGTTCTATCTGATTATGTCTGCCGTGGGTAAGGTTCCAGCGCGCGTTTTCTGGCATCTGTTAGGCGGTACCACTGTTATGCTGATCTTCGGCTACATGGGTGAGACCGGCTACATGGGTGTAGGTCCAGCATTCGCACTGTCAATGGCAGCTTGGATCTATGTAATTTGGTACATTATGAAAGGCGAAGCCAGTCAGGTTAACGCTAGCTTGGCTAACGCTAATGTCCAAAAAGCCTACAAAACAATGACTTTCCTTGTGACTGTT LLTVPLLMVEFYLIMSAVGKVPARVFWHLLGGTTVMLIFGYMGETGYMGVGPAFALSMAAWIYVIWYIMKGEASQVNASLANANVQKAYKTMTFLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTGACCGTGCCACTGTTGATGGTTGAGTTCTATCTGATTATGTCTGCC---------GTG---GGTAAGGTTCCAGCG---CGCGTT------------------------------------TTCTGGCAT---CTGTTAGGCGGTACCACTGTTATGCTGATCTTCGGCTACATGGGTGAG---------ACC------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GGTGTA------------------GGTCCAGCA---TTCGCACTGTCAATGGCAGCTTGGATCTATGTAATTTGGTACATT---------------ATG------AAA---GGCGAAGCCAGTCAGGTTAACGCTAGC------TTG---GCTAACGCTAATGTC---CAA---AAA---GCC---TAC---AAA---ACAATG---ACTTTCCTTGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPA-RV------------FWH-LLGGTTVMLIFGYMGE---T------G--Y-----------M----------------------GV------GPA-FALSMAAWIYVIWYI-----M--K-GEASQVNAS--L-ANANV-Q-K-A-Y-K-TM-TFLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927429 [I-Gamma2-a] PRGD_OTU009_c1f7780bd1d2616fa9557b95f5377fd6 gb|KJ927429| PRGD_OTU009_c1f7780bd1d2616fa9557b95f5377fd6, putative proteorhodopsin gene, partial cds. PRGD_OTU009_c1f7780bd1d2616fa9557b95f5377fd6, putative proteorhodopsin gene, partial cds. KJ927429 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-23.5956, 69.0419) CTGCTAACCGTGCCACTGTTGATGGTTGAGTTCTATCTGATTATGTCTGCAGTAGGCAAGGTACCAGCACGTGTTTTCTGGAACCTGTTAGGTGGTACTACTGCGATGTTGATCCTGGGTTACATGGGTGAAACAGGCTCCATGGGTGTAGGTCTTGCCTTCGCTCTATCAATGGCAGCTTGGCTCTACGTAATTTGGTACATCATGAAAGGCGAAGCAAGCCAAATCAATGCTAGCCTGGCTAACGTTCATGTCCAAAAAGCTTACAAGACGATGACTCTTCTTGTTACTGTT LLTVPLLMVEFYLIMSAVGKVPARVFWNLLGGTTAMLILGYMGETGSMGVGLAFALSMAAWLYVIWYIMKGEASQINASLANVHVQKAYKTMTLLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTAACCGTGCCACTGTTGATGGTTGAGTTCTATCTGATTATGTCTGCA---------GTA---GGCAAGGTACCAGCA---CGTGTT------------------------------------TTCTGGAAC---CTGTTAGGTGGTACTACTGCGATGTTGATCCTGGGTTACATGGGTGAA---------ACA------------------GGC------TCC---------------------------------ATG------------------------------------------------------------------GGTGTA------------------GGTCTTGCC---TTCGCTCTATCAATGGCAGCTTGGCTCTACGTAATTTGGTACATC---------------ATG------AAA---GGCGAAGCAAGCCAAATCAATGCTAGC------CTG---GCTAACGTTCATGTC---CAA---AAA---GCT---TAC---AAG---ACGATG---ACTCTTCTTGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPA-RV------------FWN-LLGGTTAMLILGYMGE---T------G--S-----------M----------------------GV------GLA-FALSMAAWLYVIWYI-----M--K-GEASQINAS--L-ANVHV-Q-K-A-Y-K-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927401 [I-Gamma2-a] PRGD_OTU009_6570c0be8847f127aeabaf4c718456a6 gb|KJ927401| PRGD_OTU009_6570c0be8847f127aeabaf4c718456a6, putative proteorhodopsin gene, partial cds. PRGD_OTU009_6570c0be8847f127aeabaf4c718456a6, putative proteorhodopsin gene, partial cds. KJ927401 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), English Channel (48.7717, -3.9683) CTATTAACAGTGCCATTATTGATGGTTGAATTCTACTTAATTATGTCAGCAGTAGGTAAGGTACCGGGACGAGTATTCTGGAATCTTTTCGGCGCCTCCACCATTATGCTGATCTTCGGCTACATGGGTGAAGCTGGCATGATGGATCATGGCCTTGCTTTCGCTCTTTCAATGGCATCTTGGTTCTATGTAATCTGGTACATTATCAAGGGTGAAGCAAGTCAGGTTAATGCTAGCTTGGCGAATCCTAATGTGCAGAAAGCATACAAAACTATGACTCTCCTCGTGACTGTA LLTVPLLMVEFYLIMSAVGKVPGRVFWNLFGASTIMLIFGYMGEAGMMDHGLAFALSMASWFYVIWYIIKGEASQVNASLANPNVQKAYKTMTLLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACAGTGCCATTATTGATGGTTGAATTCTACTTAATTATGTCAGCA---------GTA---GGTAAGGTACCGGGA---CGAGTA------------------------------------TTCTGGAAT---CTTTTCGGCGCCTCCACCATTATGCTGATCTTCGGCTACATGGGTGAA---------GCT------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GATCAT------------------GGCCTTGCT---TTCGCTCTTTCAATGGCATCTTGGTTCTATGTAATCTGGTACATT---------------ATC------AAG---GGTGAAGCAAGTCAGGTTAATGCTAGC------TTG---GCGAATCCTAATGTG---CAG---AAA---GCA---TAC---AAA---ACTATG---ACTCTCCTCGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-RV------------FWN-LFGASTIMLIFGYMGE---A------G--M-----------M----------------------DH------GLA-FALSMASWFYVIWYI-----I--K-GEASQVNAS--L-ANPNV-Q-K-A-Y-K-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927423 [I-Gamma2-a] PRGD_OTU009_b83d42b7af4a3db0dfc5baaaf80d4411 gb|KJ927423| PRGD_OTU009_b83d42b7af4a3db0dfc5baaaf80d4411, putative proteorhodopsin gene, partial cds. PRGD_OTU009_b83d42b7af4a3db0dfc5baaaf80d4411, putative proteorhodopsin gene, partial cds. KJ927423 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTATTAACAGTGCCATTGTTAATGGTTGAATTCTACTTAATCATGTCAGCAGTAGGTAAGGTACCGGGACGAGTATTCTGGAATCTTTTCGGCGCCTCCACCATTATGCTGATCTTCGGCTACATGGGTGAAGCTGGCATGATGGATCATGGCCTTGCTTTCGCTCTTTCAATGGCATCTTGGTTCTATGTAATCTGGTACATTATCAAGGGTGAAGCAAGTCAGGTTAATGCTAGCTTGGCGAATCCTAATGTGCAGAAAGCATACAAAACTATGACTCTCCTAGTGACTGTA LLTVPLLMVEFYLIMSAVGKVPGRVFWNLFGASTIMLIFGYMGEAGMMDHGLAFALSMASWFYVIWYIIKGEASQVNASLANPNVQKAYKTMTLLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACAGTGCCATTGTTAATGGTTGAATTCTACTTAATCATGTCAGCA---------GTA---GGTAAGGTACCGGGA---CGAGTA------------------------------------TTCTGGAAT---CTTTTCGGCGCCTCCACCATTATGCTGATCTTCGGCTACATGGGTGAA---------GCT------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GATCAT------------------GGCCTTGCT---TTCGCTCTTTCAATGGCATCTTGGTTCTATGTAATCTGGTACATT---------------ATC------AAG---GGTGAAGCAAGTCAGGTTAATGCTAGC------TTG---GCGAATCCTAATGTG---CAG---AAA---GCA---TAC---AAA---ACTATG---ACTCTCCTAGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-RV------------FWN-LFGASTIMLIFGYMGE---A------G--M-----------M----------------------DH------GLA-FALSMASWFYVIWYI-----I--K-GEASQVNAS--L-ANPNV-Q-K-A-Y-K-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927426 [I-Gamma2-a] PRGD_OTU009_c030b129a412c0fe6e5ee62ff7619ef2 gb|KJ927426| PRGD_OTU009_c030b129a412c0fe6e5ee62ff7619ef2, putative proteorhodopsin gene, partial cds. PRGD_OTU009_c030b129a412c0fe6e5ee62ff7619ef2, putative proteorhodopsin gene, partial cds. KJ927426 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Bering strait marine 67.49 -168.12 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; ; 67.49, -168.12), English Channel (48.7717, -3.9683) CTATTAACAGTGCCATTGTTGATGGTTGAATTCTACTTAATTATGTCAGCAGTAGGTAAAGTACCGGGACGAGTATTCTGGAATCTTTTCGGCGCCTCCACCATTATGCTGATCTTCGGCTACATGGGTGAAGCTGGCATGATGGATCATGGCCTTGCTTTCGCTCTTTCAATGGCATCTTGGTTCTATGTAATCTGGTACATTATCAAGGGTGAAGCAAGTCAGGTTAATGCTAGCTTGGCGAATCCTAATGTGCAGAAAGCATACAAAACTATGACTCTCCTGGTGACTGTA LLTVPLLMVEFYLIMSAVGKVPGRVFWNLFGASTIMLIFGYMGEAGMMDHGLAFALSMASWFYVIWYIIKGEASQVNASLANPNVQKAYKTMTLLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACAGTGCCATTGTTGATGGTTGAATTCTACTTAATTATGTCAGCA---------GTA---GGTAAAGTACCGGGA---CGAGTA------------------------------------TTCTGGAAT---CTTTTCGGCGCCTCCACCATTATGCTGATCTTCGGCTACATGGGTGAA---------GCT------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GATCAT------------------GGCCTTGCT---TTCGCTCTTTCAATGGCATCTTGGTTCTATGTAATCTGGTACATT---------------ATC------AAG---GGTGAAGCAAGTCAGGTTAATGCTAGC------TTG---GCGAATCCTAATGTG---CAG---AAA---GCA---TAC---AAA---ACTATG---ACTCTCCTGGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-RV------------FWN-LFGASTIMLIFGYMGE---A------G--M-----------M----------------------DH------GLA-FALSMASWFYVIWYI-----I--K-GEASQVNAS--L-ANPNV-Q-K-A-Y-K-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927422 [I-Gamma2-a] PRGD_OTU009_b5be3132186f09570b424f842d6303b7 gb|KJ927422| PRGD_OTU009_b5be3132186f09570b424f842d6303b7, putative proteorhodopsin gene, partial cds. PRGD_OTU009_b5be3132186f09570b424f842d6303b7, putative proteorhodopsin gene, partial cds. KJ927422 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Bering strait marine 67.49 -168.12 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (67.49, -168.12), Indian Ocean (-14.48, 113.45) CTGTTAACAGTGCCATTGTTGATGGTTGAATTCTACTTAATTATGTCAGCAGTAGGCAAGGTACCGGGACGAGTATTCTGGAATCTTTTCGGCGCCTCCACCATAATGCTAATCTTCGGCTACATGGGTGAAGCTGGCATGATGGATCATGGCCTTGCTTTCGCTCTTTCAATGGCATCTTGGTTCTATGTAATTTGGTACATTATCAAGGGTGAAGCAAGTCAGGTTAATGCTAGCTTGGCGAATCCTAATGTGCAGAAAGCATACAAAACTATGACTCTCCTTGTGACTGTA LLTVPLLMVEFYLIMSAVGKVPGRVFWNLFGASTIMLIFGYMGEAGMMDHGLAFALSMASWFYVIWYIIKGEASQVNASLANPNVQKAYKTMTLLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACAGTGCCATTGTTGATGGTTGAATTCTACTTAATTATGTCAGCA---------GTA---GGCAAGGTACCGGGA---CGAGTA------------------------------------TTCTGGAAT---CTTTTCGGCGCCTCCACCATAATGCTAATCTTCGGCTACATGGGTGAA---------GCT------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GATCAT------------------GGCCTTGCT---TTCGCTCTTTCAATGGCATCTTGGTTCTATGTAATTTGGTACATT---------------ATC------AAG---GGTGAAGCAAGTCAGGTTAATGCTAGC------TTG---GCGAATCCTAATGTG---CAG---AAA---GCA---TAC---AAA---ACTATG---ACTCTCCTTGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-RV------------FWN-LFGASTIMLIFGYMGE---A------G--M-----------M----------------------DH------GLA-FALSMASWFYVIWYI-----I--K-GEASQVNAS--L-ANPNV-Q-K-A-Y-K-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927390 [I-Gamma2-a] PRGD_OTU009_391250112e25f4b24348977a92e97dd6 gb|KJ927390| PRGD_OTU009_391250112e25f4b24348977a92e97dd6, putative proteorhodopsin gene, partial cds. PRGD_OTU009_391250112e25f4b24348977a92e97dd6, putative proteorhodopsin gene, partial cds. KJ927390 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833) CTCTTGACCGTGCCACTGTTGATGGTTGAGTTCTACTTAATTATGTCAGCGGTGGGTAAGGTACCGGGACGAGTATTCTGGAATCTTTTCGGCGCCTCCACCATTATGCTGATCTTCGGCTACATGGGTGAAACTGGCTCGATGAGTGTGGGCCTTGCGTTCGCTCTATCAATGGCATCTTGGTTCTATGTAATCTGGTACATTATCAAGGGTGAAGCAAGTCAGGTTAATGCTAGCTTGGCGAATCCTAATGTGCAGAAAGCATACAAAACTATGACTCTCCTTGTGACTGTA LLTVPLLMVEFYLIMSAVGKVPGRVFWNLFGASTIMLIFGYMGETGSMSVGLAFALSMASWFYVIWYIIKGEASQVNASLANPNVQKAYKTMTLLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTGACCGTGCCACTGTTGATGGTTGAGTTCTACTTAATTATGTCAGCG---------GTG---GGTAAGGTACCGGGA---CGAGTA------------------------------------TTCTGGAAT---CTTTTCGGCGCCTCCACCATTATGCTGATCTTCGGCTACATGGGTGAA---------ACT------------------GGC------TCG---------------------------------ATG------------------------------------------------------------------AGTGTG------------------GGCCTTGCG---TTCGCTCTATCAATGGCATCTTGGTTCTATGTAATCTGGTACATT---------------ATC------AAG---GGTGAAGCAAGTCAGGTTAATGCTAGC------TTG---GCGAATCCTAATGTG---CAG---AAA---GCA---TAC---AAA---ACTATG---ACTCTCCTTGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-RV------------FWN-LFGASTIMLIFGYMGE---T------G--S-----------M----------------------SV------GLA-FALSMASWFYVIWYI-----I--K-GEASQVNAS--L-ANPNV-Q-K-A-Y-K-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927419 [I-Gamma2-a] PRGD_OTU009_a74ddbb202f21eafbb6a16e82b22d69c gb|KJ927419| PRGD_OTU009_a74ddbb202f21eafbb6a16e82b22d69c, putative proteorhodopsin gene, partial cds. PRGD_OTU009_a74ddbb202f21eafbb6a16e82b22d69c, putative proteorhodopsin gene, partial cds. KJ927419 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTCTTGACCGTGCCACTGTTGATGGTTGAGTTCTACTTAATTATGTCAGCGGTAGGTAAGGTACCAGGTCGTGTTTTCTGGAACCTATTAGGCGGTACCACTGTAATGCTGATCTTCGGATACATGGGTGAAACTGGCTCGATGGGTGTGGGCCTTGCGTTCGCTCTATCAATGGCAGCATGGCTATATGTAATCTGGTACATTATTAAAGGTGAAGCAAGTCAGGTTAATGCTAGCTTGGCAAACCCTAATGTTCAGAAAGCATACAAAACCATGACTATCCTTGTAACTTTT LLTVPLLMVEFYLIMSAVGKVPGRVFWNLLGGTTVMLIFGYMGETGSMGVGLAFALSMAAWLYVIWYIIKGEASQVNASLANPNVQKAYKTMTILVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTGACCGTGCCACTGTTGATGGTTGAGTTCTACTTAATTATGTCAGCG---------GTA---GGTAAGGTACCAGGT---CGTGTT------------------------------------TTCTGGAAC---CTATTAGGCGGTACCACTGTAATGCTGATCTTCGGATACATGGGTGAA---------ACT------------------GGC------TCG---------------------------------ATG------------------------------------------------------------------GGTGTG------------------GGCCTTGCG---TTCGCTCTATCAATGGCAGCATGGCTATATGTAATCTGGTACATT---------------ATT------AAA---GGTGAAGCAAGTCAGGTTAATGCTAGC------TTG---GCAAACCCTAATGTT---CAG---AAA---GCA---TAC---AAA---ACCATG---ACTATCCTTGTAACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-RV------------FWN-LLGGTTVMLIFGYMGE---T------G--S-----------M----------------------GV------GLA-FALSMAAWLYVIWYI-----I--K-GEASQVNAS--L-ANPNV-Q-K-A-Y-K-TM-TILVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927416 [I-Gamma2-a] PRGD_OTU009_9acc019c6a28c87a1fd651024ee7f874 gb|KJ927416| PRGD_OTU009_9acc019c6a28c87a1fd651024ee7f874, putative proteorhodopsin gene, partial cds. PRGD_OTU009_9acc019c6a28c87a1fd651024ee7f874, putative proteorhodopsin gene, partial cds. KJ927416 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637; -33.9602, -73.3769), Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) CTCCTAACAGTGCCGTTGTTGATGGTGGAATTCTATTTAATCATGTCTGCAGTAGGTAAAGTTCCTGCCCGCGTATTCTGGAATCTGCTAGGTGGTACGACCGCTATGCTAATCCTTGGCTACATGGGTGAGACTGGTGCGATGGATGTCACTATGGCATTCGCCCTATCAATGCTAGCTTGGTTTTATGTCATTTGGTACATCATTAAGGGCGAGGCTAGCCAGGTTAATGCAAGTCTTGCTAATCCAAATGTCCAGAAGGCCTACAAGACTATGACTCTTTTAGTGACGGTT LLTVPLLMVEFYLIMSAVGKVPARVFWNLLGGTTAMLILGYMGETGAMDVTMAFALSMLAWFYVIWYIIKGEASQVNASLANPNVQKAYKTMTLLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTAACAGTGCCGTTGTTGATGGTGGAATTCTATTTAATCATGTCTGCA---------GTA---GGTAAAGTTCCTGCC---CGCGTA------------------------------------TTCTGGAAT---CTGCTAGGTGGTACGACCGCTATGCTAATCCTTGGCTACATGGGTGAG---------ACT------------------GGT------GCG---------------------------------ATG------------------------------------------------------------------GATGTC------------------ACTATGGCA---TTCGCCCTATCAATGCTAGCTTGGTTTTATGTCATTTGGTACATC---------------ATT------AAG---GGCGAGGCTAGCCAGGTTAATGCAAGT------CTT---GCTAATCCAAATGTC---CAG---AAG---GCC---TAC---AAG---ACTATG---ACTCTTTTAGTGACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPA-RV------------FWN-LLGGTTAMLILGYMGE---T------G--A-----------M----------------------DV------TMA-FALSMLAWFYVIWYI-----I--K-GEASQVNAS--L-ANPNV-Q-K-A-Y-K-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927438 [I-Gamma2-a] PRGD_OTU009_ea75e5fa6920ec97e6e4d1b3bc1610ce gb|KJ927438| PRGD_OTU009_ea75e5fa6920ec97e6e4d1b3bc1610ce, putative proteorhodopsin gene, partial cds. PRGD_OTU009_ea75e5fa6920ec97e6e4d1b3bc1610ce, putative proteorhodopsin gene, partial cds. KJ927438 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) CTCCTAACAGTGCCGTTGTTGATGGTGGAATTCTATTTAATCATGTCTGCAGTAGGTAAAGTTCCTGCCCGCGTATTCTGGAATCTGCTAGGTGGTACGACCGCTATGCTAATCCTTGGCTACATGGGTGAGACTGGTGCGATGGATGTCACTATGGCATTCGCCCTATCAATGCTAGCTTGGTTTTATGTCATTTGGTACATCATTAAGGGCGAGGCTAGCCAGGTTAATGCAAGTCTTGCTAATCCAAATGTCCAGAAGGCCTACAAGACTATGACTCTTTTAGTG LLTVPLLMVEFYLIMSAVGKVPARVFWNLLGGTTAMLILGYMGETGAMDVTMAFALSMLAWFYVIWYIIKGEASQVNASLANPNVQKAYKTMTLLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTAACAGTGCCGTTGTTGATGGTGGAATTCTATTTAATCATGTCTGCA---------GTA---GGTAAAGTTCCTGCC---CGCGTA------------------------------------TTCTGGAAT---CTGCTAGGTGGTACGACCGCTATGCTAATCCTTGGCTACATGGGTGAG---------ACT------------------GGT------GCG---------------------------------ATG------------------------------------------------------------------GATGTC------------------ACTATGGCA---TTCGCCCTATCAATGCTAGCTTGGTTTTATGTCATTTGGTACATC---------------ATT------AAG---GGCGAGGCTAGCCAGGTTAATGCAAGT------CTT---GCTAATCCAAATGTC---CAG---AAG---GCC---TAC---AAG---ACTATG---ACTCTTTTAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPA-RV------------FWN-LLGGTTAMLILGYMGE---T------G--A-----------M----------------------DV------TMA-FALSMLAWFYVIWYI-----I--K-GEASQVNAS--L-ANPNV-Q-K-A-Y-K-TM-TLLV---------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927405 [I-Gamma2-a] PRGD_OTU009_7557c204f1208b22f2eb26f9945877b3 gb|KJ927405| PRGD_OTU009_7557c204f1208b22f2eb26f9945877b3, putative proteorhodopsin gene, partial cds. PRGD_OTU009_7557c204f1208b22f2eb26f9945877b3, putative proteorhodopsin gene, partial cds. KJ927405 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Indian Ocean (-33.28, 45.35) CTCCTAACAGTGCCGTTGTTGATGGTGGAATTCTATTTAATCATGTCTGCAGTAGGTAAGGTTCCTGCACGCGTGTTCTGGAATCTGCTAGGTGGTACGACCGCTATGCTAATCCTTGGCTACATGGGTGAGACTGGTGCGATGGATGTCACTATGGCATTCGCCCTATCAATGCTAGCTTGGTTTTATGTCATTTGGTACATCATTAAGGGCGAGGCCAGCCAGGTTAATGCAAGTCTTGCTAATCCAAATGTCCAGAAGGCCTACAAGACTATGACTCTTTTAGTGACGGTT LLTVPLLMVEFYLIMSAVGKVPARVFWNLLGGTTAMLILGYMGETGAMDVTMAFALSMLAWFYVIWYIIKGEASQVNASLANPNVQKAYKTMTLLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTAACAGTGCCGTTGTTGATGGTGGAATTCTATTTAATCATGTCTGCA---------GTA---GGTAAGGTTCCTGCA---CGCGTG------------------------------------TTCTGGAAT---CTGCTAGGTGGTACGACCGCTATGCTAATCCTTGGCTACATGGGTGAG---------ACT------------------GGT------GCG---------------------------------ATG------------------------------------------------------------------GATGTC------------------ACTATGGCA---TTCGCCCTATCAATGCTAGCTTGGTTTTATGTCATTTGGTACATC---------------ATT------AAG---GGCGAGGCCAGCCAGGTTAATGCAAGT------CTT---GCTAATCCAAATGTC---CAG---AAG---GCC---TAC---AAG---ACTATG---ACTCTTTTAGTGACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPA-RV------------FWN-LLGGTTAMLILGYMGE---T------G--A-----------M----------------------DV------TMA-FALSMLAWFYVIWYI-----I--K-GEASQVNAS--L-ANPNV-Q-K-A-Y-K-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927400 [I-Gamma2-a] PRGD_OTU009_60e67d4beb4b3b3321380cbab31d5743 gb|KJ927400| PRGD_OTU009_60e67d4beb4b3b3321380cbab31d5743, putative proteorhodopsin gene, partial cds. PRGD_OTU009_60e67d4beb4b3b3321380cbab31d5743, putative proteorhodopsin gene, partial cds. KJ927400 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683) CTCCTAACAGTGCCGTTGTTGATGGTAGAGTTCTATTTAATCATGTCTGCAGTAGGTAAGGTTCCTGCACGCGTGTTCTGGAATCTGCTAGGTGGTACGACCGCTATGCTAATCCTTGGCTACATGGGTGAGACTGGCGCGATGGATGTCACTACTGCGTTCGTCCTATCAATGCTAGCTTGGTTTTATGTCATTTGGTACATCATTAAGGGCGAGGCTAGCCAGGTTAATGCAAGTCTTGCTAATCCAAATGTCCAGAAGGCCTATAAGACCATGACTTGGCTAGTGACGGCT LLTVPLLMVEFYLIMSAVGKVPARVFWNLLGGTTAMLILGYMGETGAMDVTTAFVLSMLAWFYVIWYIIKGEASQVNASLANPNVQKAYKTMTWLVTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTAACAGTGCCGTTGTTGATGGTAGAGTTCTATTTAATCATGTCTGCA---------GTA---GGTAAGGTTCCTGCA---CGCGTG------------------------------------TTCTGGAAT---CTGCTAGGTGGTACGACCGCTATGCTAATCCTTGGCTACATGGGTGAG---------ACT------------------GGC------GCG---------------------------------ATG------------------------------------------------------------------GATGTC------------------ACTACTGCG---TTCGTCCTATCAATGCTAGCTTGGTTTTATGTCATTTGGTACATC---------------ATT------AAG---GGCGAGGCTAGCCAGGTTAATGCAAGT------CTT---GCTAATCCAAATGTC---CAG---AAG---GCC---TAT---AAG---ACCATG---ACTTGGCTAGTGACGGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPA-RV------------FWN-LLGGTTAMLILGYMGE---T------G--A-----------M----------------------DV------TTA-FVLSMLAWFYVIWYI-----I--K-GEASQVNAS--L-ANPNV-Q-K-A-Y-K-TM-TWLVTA-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927414 [I-Gamma2-a] PRGD_OTU009_97891a8d80a6eb0d3cf251d3a7aa325e gb|KJ927414| PRGD_OTU009_97891a8d80a6eb0d3cf251d3a7aa325e, putative proteorhodopsin gene, partial cds. PRGD_OTU009_97891a8d80a6eb0d3cf251d3a7aa325e, putative proteorhodopsin gene, partial cds. KJ927414 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) CTCCTAACAGTGCCGTTGTTGATGGTGGAATTCTATTTAATCATGTCTGCAGTAGGTAAAGTTCCTGCCCGCGTATTCTGGAATCTGCTAGGTGGTACGACCGCTATGCTAATCCTTGGCTACATGGGTGAGACTGGTGCGATGGATGTCACTATGGCATTCGCCCTATCAATGCTAGCTTGGTTTTATGTTATTTGGTACATCATTAAGGGCGAGGCTAGCCAGGTTAATGCAAGTCTTGCTAATCCAAATGTCCAGAAGGCCTATAAGACCATGACTTGGCTAGTGACGGCT LLTVPLLMVEFYLIMSAVGKVPARVFWNLLGGTTAMLILGYMGETGAMDVTMAFALSMLAWFYVIWYIIKGEASQVNASLANPNVQKAYKTMTWLVTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTAACAGTGCCGTTGTTGATGGTGGAATTCTATTTAATCATGTCTGCA---------GTA---GGTAAAGTTCCTGCC---CGCGTA------------------------------------TTCTGGAAT---CTGCTAGGTGGTACGACCGCTATGCTAATCCTTGGCTACATGGGTGAG---------ACT------------------GGT------GCG---------------------------------ATG------------------------------------------------------------------GATGTC------------------ACTATGGCA---TTCGCCCTATCAATGCTAGCTTGGTTTTATGTTATTTGGTACATC---------------ATT------AAG---GGCGAGGCTAGCCAGGTTAATGCAAGT------CTT---GCTAATCCAAATGTC---CAG---AAG---GCC---TAT---AAG---ACCATG---ACTTGGCTAGTGACGGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPA-RV------------FWN-LLGGTTAMLILGYMGE---T------G--A-----------M----------------------DV------TMA-FALSMLAWFYVIWYI-----I--K-GEASQVNAS--L-ANPNV-Q-K-A-Y-K-TM-TWLVTA-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927436 [I-Gamma2-a] PRGD_OTU009_e3cf3fd0e9171e92d04828e95b0bd163 gb|KJ927436| PRGD_OTU009_e3cf3fd0e9171e92d04828e95b0bd163, putative proteorhodopsin gene, partial cds. PRGD_OTU009_e3cf3fd0e9171e92d04828e95b0bd163, putative proteorhodopsin gene, partial cds. KJ927436 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025) TTGCTAACAGTGCCTTTATTGATGGTCGAGTTCTATTTGATTATGTCAGCTGTTGGTAAGGTACCCGCACGCGTATTCTGGAATCTACTTGGCGGCACAACTGCTATGTTGATCTTTGGATACATGGGCGAGACTGGCATGATGGGTGTGACAATGGCCTTTATCCTATCGATGGGAGCTTGGTTCTATGTAATTTGGTACATAATGAAAGGTGAAGCAAGTCAGGTTAACGCTAGCTTGGCTAATGCCAATGTCCAGAAAGCTTACAAAACAATGACGTTCCTTGTCACTGTT LLTVPLLMVEFYLIMSAVGKVPARVFWNLLGGTTAMLIFGYMGETGMMGVTMAFILSMGAWFYVIWYIMKGEASQVNASLANANVQKAYKTMTFLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTAACAGTGCCTTTATTGATGGTCGAGTTCTATTTGATTATGTCAGCT---------GTT---GGTAAGGTACCCGCA---CGCGTA------------------------------------TTCTGGAAT---CTACTTGGCGGCACAACTGCTATGTTGATCTTTGGATACATGGGCGAG---------ACT------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GGTGTG------------------ACAATGGCC---TTTATCCTATCGATGGGAGCTTGGTTCTATGTAATTTGGTACATA---------------ATG------AAA---GGTGAAGCAAGTCAGGTTAACGCTAGC------TTG---GCTAATGCCAATGTC---CAG---AAA---GCT---TAC---AAA---ACAATG---ACGTTCCTTGTCACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPA-RV------------FWN-LLGGTTAMLIFGYMGE---T------G--M-----------M----------------------GV------TMA-FILSMGAWFYVIWYI-----M--K-GEASQVNAS--L-ANANV-Q-K-A-Y-K-TM-TFLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927432 [I-Gamma2-a] PRGD_OTU009_cb22f88a53b9ac90b63b51f3630f014e gb|KJ927432| PRGD_OTU009_cb22f88a53b9ac90b63b51f3630f014e, putative proteorhodopsin gene, partial cds. PRGD_OTU009_cb22f88a53b9ac90b63b51f3630f014e, putative proteorhodopsin gene, partial cds. KJ927432 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGTTGACTGTGCCACTGTTGATGGTTGAGTTCTACTTGATTATGTCAGCAGTAGGCAAAGTGCCTGGTCGTGTTTTCTGGAATCTCTTGATTGGTACCACTCTGATGTTGGTACTCGGTTACATGGGAGAGACCGGATCATTGGATGTAACAATTGCCTTCGGTCTATCGATGGCGGCTTGGTTCTATGTAATCTGGTACATCATCAAAGGTGAAGCTAGCCAAGTTAATGCTAGTTTGGCCAATGCCAATGTACAAAAAGCCTACAAAACGATGACTCTATTGGTTACGTTT LLTVPLLMVEFYLIMSAVGKVPGRVFWNLLIGTTLMLVLGYMGETGSLDVTIAFGLSMAAWFYVIWYIIKGEASQVNASLANANVQKAYKTMTLLVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTGACTGTGCCACTGTTGATGGTTGAGTTCTACTTGATTATGTCAGCA---------GTA---GGCAAAGTGCCTGGT---CGTGTT------------------------------------TTCTGGAAT---CTCTTGATTGGTACCACTCTGATGTTGGTACTCGGTTACATGGGAGAG---------ACC------------------GGA------TCA---------------------------------TTG------------------------------------------------------------------GATGTA------------------ACAATTGCC---TTCGGTCTATCGATGGCGGCTTGGTTCTATGTAATCTGGTACATC---------------ATC------AAA---GGTGAAGCTAGCCAAGTTAATGCTAGT------TTG---GCCAATGCCAATGTA---CAA---AAA---GCC---TAC---AAA---ACGATG---ACTCTATTGGTTACGTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-RV------------FWN-LLIGTTLMLVLGYMGE---T------G--S-----------L----------------------DV------TIA-FGLSMAAWFYVIWYI-----I--K-GEASQVNAS--L-ANANV-Q-K-A-Y-K-TM-TLLVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927434 [I-Gamma2-a] PRGD_OTU009_cfed482e5f8ee831e539673db561bf0c gb|KJ927434| PRGD_OTU009_cfed482e5f8ee831e539673db561bf0c, putative proteorhodopsin gene, partial cds. PRGD_OTU009_cfed482e5f8ee831e539673db561bf0c, putative proteorhodopsin gene, partial cds. KJ927434 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTGTTGACTGTGCCACTGTTGATGGTTGAGTTCTACTTGATTATGTCAGCAGTAGGCAAAGTGCCAGGTCGTGTTTTCTGGAATCTCTTGATTGGTACCACTCTTATGTTGGTACTCGGATACATGGGAGAGACCGGAACATTGGATGTAACAATTGCCTTCGCTCTATCGATGGCGGCTTGGTTCTATGTAATCTGGTACATCATCAAAGGTGAAGCTAGTCAAGTTAATGCTAGTTTGGCCAATGCCAATGTACAAAAAGCCTACAAAACGATGACTCTATTGGTTACGTTT LLTVPLLMVEFYLIMSAVGKVPGRVFWNLLIGTTLMLVLGYMGETGTLDVTIAFALSMAAWFYVIWYIIKGEASQVNASLANANVQKAYKTMTLLVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTGACTGTGCCACTGTTGATGGTTGAGTTCTACTTGATTATGTCAGCA---------GTA---GGCAAAGTGCCAGGT---CGTGTT------------------------------------TTCTGGAAT---CTCTTGATTGGTACCACTCTTATGTTGGTACTCGGATACATGGGAGAG---------ACC------------------GGA------ACA---------------------------------TTG------------------------------------------------------------------GATGTA------------------ACAATTGCC---TTCGCTCTATCGATGGCGGCTTGGTTCTATGTAATCTGGTACATC---------------ATC------AAA---GGTGAAGCTAGTCAAGTTAATGCTAGT------TTG---GCCAATGCCAATGTA---CAA---AAA---GCC---TAC---AAA---ACGATG---ACTCTATTGGTTACGTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-RV------------FWN-LLIGTTLMLVLGYMGE---T------G--T-----------L----------------------DV------TIA-FALSMAAWFYVIWYI-----I--K-GEASQVNAS--L-ANANV-Q-K-A-Y-K-TM-TLLVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927439 [I-Gamma2-a] PRGD_OTU009_eb36f5f4b2779cc5187866e3e43c5c9f gb|KJ927439| PRGD_OTU009_eb36f5f4b2779cc5187866e3e43c5c9f, putative proteorhodopsin gene, partial cds. PRGD_OTU009_eb36f5f4b2779cc5187866e3e43c5c9f, putative proteorhodopsin gene, partial cds. KJ927439 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGTTGACTGTGCCACTGTTGATGGTTGAGTTCTACTTGATTATGTCAGCAGTAGGCAAAGTGCCTGGTCGTGTTTTCTGGAATCTTCTAATCGCCTCCACCTTGATGCTGGTCCTTGGGTACTTAGGAGAGACTGGAACATTGGATGTAACAATTGCCTTCGCTCTATCGATGGCGGCTTGGTTCTATGTAATCTGGTACATCATCAAAGGTGAAGCTAGTCAAGTTAATGCTAGTTTGGCCAATGCCAATGTACAAAAAGCCTACAAAACGATGACTCTATTGGTTACGTTT LLTVPLLMVEFYLIMSAVGKVPGRVFWNLLIASTLMLVLGYLGETGTLDVTIAFALSMAAWFYVIWYIIKGEASQVNASLANANVQKAYKTMTLLVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTGACTGTGCCACTGTTGATGGTTGAGTTCTACTTGATTATGTCAGCA---------GTA---GGCAAAGTGCCTGGT---CGTGTT------------------------------------TTCTGGAAT---CTTCTAATCGCCTCCACCTTGATGCTGGTCCTTGGGTACTTAGGAGAG---------ACT------------------GGA------ACA---------------------------------TTG------------------------------------------------------------------GATGTA------------------ACAATTGCC---TTCGCTCTATCGATGGCGGCTTGGTTCTATGTAATCTGGTACATC---------------ATC------AAA---GGTGAAGCTAGTCAAGTTAATGCTAGT------TTG---GCCAATGCCAATGTA---CAA---AAA---GCC---TAC---AAA---ACGATG---ACTCTATTGGTTACGTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-RV------------FWN-LLIASTLMLVLGYLGE---T------G--T-----------L----------------------DV------TIA-FALSMAAWFYVIWYI-----I--K-GEASQVNAS--L-ANANV-Q-K-A-Y-K-TM-TLLVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927420 [I-Gamma2-a] PRGD_OTU009_a8d3d23122608b85e4d49ada06cf3e86 gb|KJ927420| PRGD_OTU009_a8d3d23122608b85e4d49ada06cf3e86, putative proteorhodopsin gene, partial cds. PRGD_OTU009_a8d3d23122608b85e4d49ada06cf3e86, putative proteorhodopsin gene, partial cds. KJ927420 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTATTGACTGTGCCACTGTTGATGGTTGAGTTCTACTTAATCATGTCTGCAGTAGGTAAAGTGCCTGGTCGCGTTTTCTGGAATCTTCTAGTAGGTACCACTTTAATGCTGGTGCTTGGATACATGGGAGAAACTGGATCATTAGACGTAACCATAGCCTTTGTTCTATCAATGTCGGCTTGGATCTATGTAATCTGGTACATCATTAAAGGTGAAGCTAGTCAGGTTAACGCTAGTTTAGCTAATGCTAATGTACAGAAAGCCTACAAAACGATGACTCTGCTGGTCACGTTC LLTVPLLMVEFYLIMSAVGKVPGRVFWNLLVGTTLMLVLGYMGETGSLDVTIAFVLSMSAWIYVIWYIIKGEASQVNASLANANVQKAYKTMTLLVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTGACTGTGCCACTGTTGATGGTTGAGTTCTACTTAATCATGTCTGCA---------GTA---GGTAAAGTGCCTGGT---CGCGTT------------------------------------TTCTGGAAT---CTTCTAGTAGGTACCACTTTAATGCTGGTGCTTGGATACATGGGAGAA---------ACT------------------GGA------TCA---------------------------------TTA------------------------------------------------------------------GACGTA------------------ACCATAGCC---TTTGTTCTATCAATGTCGGCTTGGATCTATGTAATCTGGTACATC---------------ATT------AAA---GGTGAAGCTAGTCAGGTTAACGCTAGT------TTA---GCTAATGCTAATGTA---CAG---AAA---GCC---TAC---AAA---ACGATG---ACTCTGCTGGTCACGTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-RV------------FWN-LLVGTTLMLVLGYMGE---T------G--S-----------L----------------------DV------TIA-FVLSMSAWIYVIWYI-----I--K-GEASQVNAS--L-ANANV-Q-K-A-Y-K-TM-TLLVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927406 [I-Gamma2-a] PRGD_OTU009_7f82b0e4c0b6c6cf9d71b7ce022a4afd gb|KJ927406| PRGD_OTU009_7f82b0e4c0b6c6cf9d71b7ce022a4afd, putative proteorhodopsin gene, partial cds. PRGD_OTU009_7f82b0e4c0b6c6cf9d71b7ce022a4afd, putative proteorhodopsin gene, partial cds. KJ927406 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTACTGACGGTTCCTCTGCTAATGGTTGAATTCTATTTAATCATGTCAGCGGTAGGCAAAGTTCCAGGGCGTGTATTCTGGAACCTATTAGTCGGTACTACTGTAATGCTGATCTTCGGCTATATGGGCGAAACAGGCATGATGGGTGTCGGGCTAGCCTTCGTTCTGTCAATGGCAGCATGGTTATACGTGATCTGGTACATCATGAAAGGTGAAGCTAGTCAGGTTAACGCCAGCCTAGCCAATGCAAATGTTCAGAAAGCCTACAAGACAATGACCTTCTTGGTCACCGTC LLTVPLLMVEFYLIMSAVGKVPGRVFWNLLVGTTVMLIFGYMGETGMMGVGLAFVLSMAAWLYVIWYIMKGEASQVNASLANANVQKAYKTMTFLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTGACGGTTCCTCTGCTAATGGTTGAATTCTATTTAATCATGTCAGCG---------GTA---GGCAAAGTTCCAGGG---CGTGTA------------------------------------TTCTGGAAC---CTATTAGTCGGTACTACTGTAATGCTGATCTTCGGCTATATGGGCGAA---------ACA------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GGTGTC------------------GGGCTAGCC---TTCGTTCTGTCAATGGCAGCATGGTTATACGTGATCTGGTACATC---------------ATG------AAA---GGTGAAGCTAGTCAGGTTAACGCCAGC------CTA---GCCAATGCAAATGTT---CAG---AAA---GCC---TAC---AAG---ACAATG---ACCTTCTTGGTCACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-RV------------FWN-LLVGTTVMLIFGYMGE---T------G--M-----------M----------------------GV------GLA-FVLSMAAWLYVIWYI-----M--K-GEASQVNAS--L-ANANV-Q-K-A-Y-K-TM-TFLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927431 [I-Gamma2-a] PRGD_OTU009_cb16ae4b685130c79e1e75e655640011 gb|KJ927431| PRGD_OTU009_cb16ae4b685130c79e1e75e655640011, putative proteorhodopsin gene, partial cds. PRGD_OTU009_cb16ae4b685130c79e1e75e655640011, putative proteorhodopsin gene, partial cds. KJ927431 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTACTGACGGTTCCTCTGCTAATGGTTGAATTCTATTTAATCATGTCAGCGGTAGGCAAAGTTCCAGGGCGTGTATTCTGGAACCTATTAGTCGGTACTACTGTAATGCTGATCTTCGGCTATATGGGCGAAACAGGCATGATGGGTGTCGGGCTAGCCTTCGTTCTGTCAATGGCAGCGTGGTTATACGTGATCTGGTATATCATGAAAGGTGAAGCTAGTCAGGTTAATGCCAGCCTAGCCAATGCAAATGTTCAGAAAGCCTACAAGACAATGACCTTCTTGGTCACCGTC LLTVPLLMVEFYLIMSAVGKVPGRVFWNLLVGTTVMLIFGYMGETGMMGVGLAFVLSMAAWLYVIWYIMKGEASQVNASLANANVQKAYKTMTFLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTGACGGTTCCTCTGCTAATGGTTGAATTCTATTTAATCATGTCAGCG---------GTA---GGCAAAGTTCCAGGG---CGTGTA------------------------------------TTCTGGAAC---CTATTAGTCGGTACTACTGTAATGCTGATCTTCGGCTATATGGGCGAA---------ACA------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GGTGTC------------------GGGCTAGCC---TTCGTTCTGTCAATGGCAGCGTGGTTATACGTGATCTGGTATATC---------------ATG------AAA---GGTGAAGCTAGTCAGGTTAATGCCAGC------CTA---GCCAATGCAAATGTT---CAG---AAA---GCC---TAC---AAG---ACAATG---ACCTTCTTGGTCACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-RV------------FWN-LLVGTTVMLIFGYMGE---T------G--M-----------M----------------------GV------GLA-FVLSMAAWLYVIWYI-----M--K-GEASQVNAS--L-ANANV-Q-K-A-Y-K-TM-TFLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927412 [I-Gamma2-a] PRGD_OTU009_91353f197580f0610536e98dad3d2e4b gb|KJ927412| PRGD_OTU009_91353f197580f0610536e98dad3d2e4b, putative proteorhodopsin gene, partial cds. PRGD_OTU009_91353f197580f0610536e98dad3d2e4b, putative proteorhodopsin gene, partial cds. KJ927412 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683) CTACTGACGGTTCCTCTGCTAATGGTTGAATTCTATTTAATCATGTCAGCGGTAGGCAAAGTTCCAGGGCGTGTATTCTGGAACCTATTAGTCGGTACTACTGTAATGCTGATCTTCGGCTATATGGGCGAAACAGGCATGATGGGTGTCGGGCTAGCCTTCGTTCTGTCGATGGCAGCATGGTTCTACGTGATCTGGTACATCATGAAAGGTGAAGCTAGTCAGGTTAATGCCAGCCTAGCCAATGCAAATGTTCAGAAAGCCTACAAGACAATGACCTTCTTGGTCACCGTC LLTVPLLMVEFYLIMSAVGKVPGRVFWNLLVGTTVMLIFGYMGETGMMGVGLAFVLSMAAWFYVIWYIMKGEASQVNASLANANVQKAYKTMTFLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTGACGGTTCCTCTGCTAATGGTTGAATTCTATTTAATCATGTCAGCG---------GTA---GGCAAAGTTCCAGGG---CGTGTA------------------------------------TTCTGGAAC---CTATTAGTCGGTACTACTGTAATGCTGATCTTCGGCTATATGGGCGAA---------ACA------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GGTGTC------------------GGGCTAGCC---TTCGTTCTGTCGATGGCAGCATGGTTCTACGTGATCTGGTACATC---------------ATG------AAA---GGTGAAGCTAGTCAGGTTAATGCCAGC------CTA---GCCAATGCAAATGTT---CAG---AAA---GCC---TAC---AAG---ACAATG---ACCTTCTTGGTCACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-RV------------FWN-LLVGTTVMLIFGYMGE---T------G--M-----------M----------------------GV------GLA-FVLSMAAWFYVIWYI-----M--K-GEASQVNAS--L-ANANV-Q-K-A-Y-K-TM-TFLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927428 [I-Gamma2-a] PRGD_OTU009_c1d3c31591d7e38e696706f781452031 gb|KJ927428| PRGD_OTU009_c1d3c31591d7e38e696706f781452031, putative proteorhodopsin gene, partial cds. PRGD_OTU009_c1d3c31591d7e38e696706f781452031, putative proteorhodopsin gene, partial cds. KJ927428 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -33.9602, -73.3769), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTGTTGACTGTACCTCTGCTGATGGTTGAGTTCTACTTAATCATGTCGGCGGTGGGTAAAGTGCCGGGGCGCGTGTTTTGGAACCTATTGATTGGTACCACCGTAATGCTTATCTTCGGCTACATGGGAGAGACAGGCATGATGGGTGTCGGGCTAGCCTTCGTACTGTCGATGGGAGCATGGTTCTACGTGATCTGGTACATCATGAAAGGTGAAGCTAGTCAGGTTAACGCCAGCCTAGCCAATGCAAATGTTCAGAAAGCCTATAAGACAATGACCTTCTTGGTTACCGTC LLTVPLLMVEFYLIMSAVGKVPGRVFWNLLIGTTVMLIFGYMGETGMMGVGLAFVLSMGAWFYVIWYIMKGEASQVNASLANANVQKAYKTMTFLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTGACTGTACCTCTGCTGATGGTTGAGTTCTACTTAATCATGTCGGCG---------GTG---GGTAAAGTGCCGGGG---CGCGTG------------------------------------TTTTGGAAC---CTATTGATTGGTACCACCGTAATGCTTATCTTCGGCTACATGGGAGAG---------ACA------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GGTGTC------------------GGGCTAGCC---TTCGTACTGTCGATGGGAGCATGGTTCTACGTGATCTGGTACATC---------------ATG------AAA---GGTGAAGCTAGTCAGGTTAACGCCAGC------CTA---GCCAATGCAAATGTT---CAG---AAA---GCC---TAT---AAG---ACAATG---ACCTTCTTGGTTACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-RV------------FWN-LLIGTTVMLIFGYMGE---T------G--M-----------M----------------------GV------GLA-FVLSMGAWFYVIWYI-----M--K-GEASQVNAS--L-ANANV-Q-K-A-Y-K-TM-TFLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927398 [I-Gamma2-a] PRGD_OTU009_59d298a4037a3a2b17c8ad93605c52e8 gb|KJ927398| PRGD_OTU009_59d298a4037a3a2b17c8ad93605c52e8, putative proteorhodopsin gene, partial cds. PRGD_OTU009_59d298a4037a3a2b17c8ad93605c52e8, putative proteorhodopsin gene, partial cds. KJ927398 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTACTGACTGTGCCGCTGCTGATGGTAGAGTTCTACCTCATTATGTCTGCAGTTGGTAAAGTGCCAGCACGTGTGTTCTGGAATCTTCTCGTCGGTACTACCGCCATGTTGGTTTTGGGTTACATGGGTGAGACGGGCATGATGGGCGTAGGTTTGGCATTTGCCCTATCAATGGCGGCTTGGATCTATGTAATCTGGTACATCATGAAAGGTGAAGCTAGCCAGATCAACGCAAGCTTAGCCAACGCTAACGTCCAAAAAGCGTACAAAACCATGACTCTTTTGGTTACCGTA LLTVPLLMVEFYLIMSAVGKVPARVFWNLLVGTTAMLVLGYMGETGMMGVGLAFALSMAAWIYVIWYIMKGEASQINASLANANVQKAYKTMTLLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTGACTGTGCCGCTGCTGATGGTAGAGTTCTACCTCATTATGTCTGCA---------GTT---GGTAAAGTGCCAGCA---CGTGTG------------------------------------TTCTGGAAT---CTTCTCGTCGGTACTACCGCCATGTTGGTTTTGGGTTACATGGGTGAG---------ACG------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GGCGTA------------------GGTTTGGCA---TTTGCCCTATCAATGGCGGCTTGGATCTATGTAATCTGGTACATC---------------ATG------AAA---GGTGAAGCTAGCCAGATCAACGCAAGC------TTA---GCCAACGCTAACGTC---CAA---AAA---GCG---TAC---AAA---ACCATG---ACTCTTTTGGTTACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPA-RV------------FWN-LLVGTTAMLVLGYMGE---T------G--M-----------M----------------------GV------GLA-FALSMAAWIYVIWYI-----M--K-GEASQINAS--L-ANANV-Q-K-A-Y-K-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927421 [I-Gamma2-a] PRGD_OTU009_b0fc57ed7ea72081bc28f6ba966f3156 gb|KJ927421| PRGD_OTU009_b0fc57ed7ea72081bc28f6ba966f3156, putative proteorhodopsin gene, partial cds. PRGD_OTU009_b0fc57ed7ea72081bc28f6ba966f3156, putative proteorhodopsin gene, partial cds. KJ927421 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTACTGACTGTGCCGCTGCTGATGGTAGAGTTCTACCTCATTATGTCTGCAGTTGGTAAAGTGCCAGCACGTGTGTTCTGGAATCTTCTCGTCGGTACTACCGCCATGTTGGTTTTGGGTTACATGGGTGAGACGGGCATGATGGGCGTAGGTTTGGCATTTGCCCTATCAATGGCGGCTTGGATCTATGTAATTTGGTACATCATGAAAGGTGAAGCTAGCCAGATCAATGCAAGCTTAGCCAATGCCAACGTTCAGAAAGCTTACAAAACCATGACTCTTTTGGTCACCGTA LLTVPLLMVEFYLIMSAVGKVPARVFWNLLVGTTAMLVLGYMGETGMMGVGLAFALSMAAWIYVIWYIMKGEASQINASLANANVQKAYKTMTLLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTGACTGTGCCGCTGCTGATGGTAGAGTTCTACCTCATTATGTCTGCA---------GTT---GGTAAAGTGCCAGCA---CGTGTG------------------------------------TTCTGGAAT---CTTCTCGTCGGTACTACCGCCATGTTGGTTTTGGGTTACATGGGTGAG---------ACG------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GGCGTA------------------GGTTTGGCA---TTTGCCCTATCAATGGCGGCTTGGATCTATGTAATTTGGTACATC---------------ATG------AAA---GGTGAAGCTAGCCAGATCAATGCAAGC------TTA---GCCAATGCCAACGTT---CAG---AAA---GCT---TAC---AAA---ACCATG---ACTCTTTTGGTCACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPA-RV------------FWN-LLVGTTAMLVLGYMGE---T------G--M-----------M----------------------GV------GLA-FALSMAAWIYVIWYI-----M--K-GEASQINAS--L-ANANV-Q-K-A-Y-K-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927380 [I-Gamma2-a] PRGD_OTU009_087e2510eb9ee1793082a9bd6b4723ac gb|KJ927380| PRGD_OTU009_087e2510eb9ee1793082a9bd6b4723ac, putative proteorhodopsin gene, partial cds. PRGD_OTU009_087e2510eb9ee1793082a9bd6b4723ac, putative proteorhodopsin gene, partial cds. KJ927380 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTACTGACCGTGCCGCTATTGATGGTAGAGTTCTACCTGATTATGTCGGCAGTTGGTAAAGTGCCAGCACGCGTGTTCTGGAATCTACTCGTCGGTTCTACTGCCATGTTGGTTTTGGGTTACATGGGTGAAACGGGCATGATGGGTGTAGGTTTGGCATTTGCCCTATCAATGGCGGCTTGGATCTATGTAATCTGGTACATCATGAAAGGTGAAGCTAGCCAGGTCAACGCAAGCTTAGCCAACGCCAACGTGCAGAAAGCGTACAAAACCATGACTCTGTTGGTCACCGTA LLTVPLLMVEFYLIMSAVGKVPARVFWNLLVGSTAMLVLGYMGETGMMGVGLAFALSMAAWIYVIWYIMKGEASQVNASLANANVQKAYKTMTLLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTGACCGTGCCGCTATTGATGGTAGAGTTCTACCTGATTATGTCGGCA---------GTT---GGTAAAGTGCCAGCA---CGCGTG------------------------------------TTCTGGAAT---CTACTCGTCGGTTCTACTGCCATGTTGGTTTTGGGTTACATGGGTGAA---------ACG------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GGTGTA------------------GGTTTGGCA---TTTGCCCTATCAATGGCGGCTTGGATCTATGTAATCTGGTACATC---------------ATG------AAA---GGTGAAGCTAGCCAGGTCAACGCAAGC------TTA---GCCAACGCCAACGTG---CAG---AAA---GCG---TAC---AAA---ACCATG---ACTCTGTTGGTCACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPA-RV------------FWN-LLVGSTAMLVLGYMGE---T------G--M-----------M----------------------GV------GLA-FALSMAAWIYVIWYI-----M--K-GEASQVNAS--L-ANANV-Q-K-A-Y-K-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927435 [I-Gamma2-a] PRGD_OTU009_e19102db86f57b9462dcc16f8784a37e gb|KJ927435| PRGD_OTU009_e19102db86f57b9462dcc16f8784a37e, putative proteorhodopsin gene, partial cds. PRGD_OTU009_e19102db86f57b9462dcc16f8784a37e, putative proteorhodopsin gene, partial cds. KJ927435 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097), Arctic Ocean-Pacific side (72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTACTGACCGTGCCGCTATTGATGGTAGAGTTTTACCTGATTATGTCGGCAGTTGGTAAAGTGCCAGCACGTGTGTTCTGGAATCTACTTGTCGGTACCACCGCTATGCTGGTCTTGGGGTACATGGGTGAGACGGGCATGATGGGCGTAGGTTTGGCATTTGCCCTATCAATGGCGGCTTGGATCTATGTAATCTGGTACATCATGAAAGGTGAAGCTAGCCAAATTAACGCAAGCCTAGCCAACGCCAACGTACAGAAAGCGTACAAAACCATGACTCTTCTGGTCACCGTT LLTVPLLMVEFYLIMSAVGKVPARVFWNLLVGTTAMLVLGYMGETGMMGVGLAFALSMAAWIYVIWYIMKGEASQINASLANANVQKAYKTMTLLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTGACCGTGCCGCTATTGATGGTAGAGTTTTACCTGATTATGTCGGCA---------GTT---GGTAAAGTGCCAGCA---CGTGTG------------------------------------TTCTGGAAT---CTACTTGTCGGTACCACCGCTATGCTGGTCTTGGGGTACATGGGTGAG---------ACG------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GGCGTA------------------GGTTTGGCA---TTTGCCCTATCAATGGCGGCTTGGATCTATGTAATCTGGTACATC---------------ATG------AAA---GGTGAAGCTAGCCAAATTAACGCAAGC------CTA---GCCAACGCCAACGTA---CAG---AAA---GCG---TAC---AAA---ACCATG---ACTCTTCTGGTCACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPA-RV------------FWN-LLVGTTAMLVLGYMGE---T------G--M-----------M----------------------GV------GLA-FALSMAAWIYVIWYI-----M--K-GEASQINAS--L-ANANV-Q-K-A-Y-K-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927403 [I-Gamma2-a] PRGD_OTU009_68cbf26c3611812873b979ba398f1b31 gb|KJ927403| PRGD_OTU009_68cbf26c3611812873b979ba398f1b31, putative proteorhodopsin gene, partial cds. PRGD_OTU009_68cbf26c3611812873b979ba398f1b31, putative proteorhodopsin gene, partial cds. KJ927403 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTACTGACCGTGCCGCTATTGATGGTAGAGTTTTACCTGATTATGTCGGCAGTTGGTAAAGTGCCAGCACGTGTGTTCTGGAATCTACTCGTCGGTACTACCGCTATGTTGGTTTTGGGTTACATGGGTGAGACGGGCATGATGGGCGTAGGTTTGGCATTTGCCCTATCAATGGCGGCTTGGATCTATGTAATCTGGTACATCATCAAAGGTGAAGCTAGCCAGATCAATGCAAGCTTAGCCAACGCCAACGTTCAGAAAGCCTACAAAACCATGACTCTTTTGGTCACCGTA LLTVPLLMVEFYLIMSAVGKVPARVFWNLLVGTTAMLVLGYMGETGMMGVGLAFALSMAAWIYVIWYIIKGEASQINASLANANVQKAYKTMTLLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTGACCGTGCCGCTATTGATGGTAGAGTTTTACCTGATTATGTCGGCA---------GTT---GGTAAAGTGCCAGCA---CGTGTG------------------------------------TTCTGGAAT---CTACTCGTCGGTACTACCGCTATGTTGGTTTTGGGTTACATGGGTGAG---------ACG------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GGCGTA------------------GGTTTGGCA---TTTGCCCTATCAATGGCGGCTTGGATCTATGTAATCTGGTACATC---------------ATC------AAA---GGTGAAGCTAGCCAGATCAATGCAAGC------TTA---GCCAACGCCAACGTT---CAG---AAA---GCC---TAC---AAA---ACCATG---ACTCTTTTGGTCACCGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPA-RV------------FWN-LLVGTTAMLVLGYMGE---T------G--M-----------M----------------------GV------GLA-FALSMAAWIYVIWYI-----I--K-GEASQINAS--L-ANANV-Q-K-A-Y-K-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927384 [I-Gamma2-a] PRGD_OTU009_1a36a65ad5a1fb70bb793059f81fa787 gb|KJ927384| PRGD_OTU009_1a36a65ad5a1fb70bb793059f81fa787, putative proteorhodopsin gene, partial cds. PRGD_OTU009_1a36a65ad5a1fb70bb793059f81fa787, putative proteorhodopsin gene, partial cds. KJ927384 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTACTTACAGTGCCGTTGCTGATGGTGGAGTTCTATTTGATTATGTCGGCAGTAGGTAAGGTTCCAGGGCGTGTATTTTGGAATCTTCTAGTCGGTACTACGGTGATGTTGGTGCTAGGCTACATGGGCGAAACCGGCATGATGGGCGTAGGCTTAGCCTTCGCATTATCGATGGCGGCTTGGATCTACGTTATCTGGTACATCATCAAAGGTGAAGCTAGCCAAATCAATGCAAGCTTGGCAAATGCCAATGTTCAAAAAGCCTATAAAACTATGACTCTTCTGGTCACCGTG LLTVPLLMVEFYLIMSAVGKVPGRVFWNLLVGTTVMLVLGYMGETGMMGVGLAFALSMAAWIYVIWYIIKGEASQINASLANANVQKAYKTMTLLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTTACAGTGCCGTTGCTGATGGTGGAGTTCTATTTGATTATGTCGGCA---------GTA---GGTAAGGTTCCAGGG---CGTGTA------------------------------------TTTTGGAAT---CTTCTAGTCGGTACTACGGTGATGTTGGTGCTAGGCTACATGGGCGAA---------ACC------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GGCGTA------------------GGCTTAGCC---TTCGCATTATCGATGGCGGCTTGGATCTACGTTATCTGGTACATC---------------ATC------AAA---GGTGAAGCTAGCCAAATCAATGCAAGC------TTG---GCAAATGCCAATGTT---CAA---AAA---GCC---TAT---AAA---ACTATG---ACTCTTCTGGTCACCGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-RV------------FWN-LLVGTTVMLVLGYMGE---T------G--M-----------M----------------------GV------GLA-FALSMAAWIYVIWYI-----I--K-GEASQINAS--L-ANANV-Q-K-A-Y-K-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927388 [I-Gamma2-a] PRGD_OTU009_32c09b76c0397ec10f77985322e1ac7f gb|KJ927388| PRGD_OTU009_32c09b76c0397ec10f77985322e1ac7f, putative proteorhodopsin gene, partial cds. PRGD_OTU009_32c09b76c0397ec10f77985322e1ac7f, putative proteorhodopsin gene, partial cds. KJ927388 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (33.935, 18.508), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTACTCACAGTGCCGCTGTTGATGGTGGAGTTCTATTTGATTATGTCGGCCGTAGGTAAGGTTCCAGGGCGTGTATTTTGGAATCTTTTAGTCGGTACTACGGTGATGTTGGTGCTAGGTTACATGGGCGAAACTGGCATGATGGGCGTAGGCTTAGCCTTCGCATTATCAATGGCGGCTTGGATCTACGTTATCTGGTACATCATCAAAGGTGAAGCTAGCCAAATCAATGCAAGCTTGGCAAATGCCAATGTCCAGAAAGCCTATAAAACTATGACTCTTCTGGTCACAGTG LLTVPLLMVEFYLIMSAVGKVPGRVFWNLLVGTTVMLVLGYMGETGMMGVGLAFALSMAAWIYVIWYIIKGEASQINASLANANVQKAYKTMTLLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTCACAGTGCCGCTGTTGATGGTGGAGTTCTATTTGATTATGTCGGCC---------GTA---GGTAAGGTTCCAGGG---CGTGTA------------------------------------TTTTGGAAT---CTTTTAGTCGGTACTACGGTGATGTTGGTGCTAGGTTACATGGGCGAA---------ACT------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GGCGTA------------------GGCTTAGCC---TTCGCATTATCAATGGCGGCTTGGATCTACGTTATCTGGTACATC---------------ATC------AAA---GGTGAAGCTAGCCAAATCAATGCAAGC------TTG---GCAAATGCCAATGTC---CAG---AAA---GCC---TAT---AAA---ACTATG---ACTCTTCTGGTCACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-RV------------FWN-LLVGTTVMLVLGYMGE---T------G--M-----------M----------------------GV------GLA-FALSMAAWIYVIWYI-----I--K-GEASQINAS--L-ANANV-Q-K-A-Y-K-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927391 [I-Gamma2-a] PRGD_OTU009_39dfd18caaf538f8815064c253e60a01 gb|KJ927391| PRGD_OTU009_39dfd18caaf538f8815064c253e60a01, putative proteorhodopsin gene, partial cds. PRGD_OTU009_39dfd18caaf538f8815064c253e60a01, putative proteorhodopsin gene, partial cds. KJ927391 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Bering strait marine 67.49 -168.12 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73) TTACTCACTGTGCCGTTATTGATGGCTGAGTTCTATCTGATTATGTCTGCCGTAGGCAAGGTACCAGGACGAGTGTTCTGGAATCTATTAGGTGGTTCTACTGCTATGTTGCTATTCGGCTATGCTGGTGAGACTGGCATGATGAGTCCACTTATGGGCTTCGTTCTGTCCATGGCAGCTTGGTTCTATGTAATCTGGTACATCATTAAAGGCGAAGCCAGCAAAGTTAATGCTAGCTTGGCAAACCCAAATGTACAGAAAGCTTATAAGACAATGACCTTGTTGGTTACTGTT LLTVPLLMAEFYLIMSAVGKVPGRVFWNLLGGSTAMLLFGYAGETGMMSPLMGFVLSMAAWFYVIWYIIKGEASKVNASLANPNVQKAYKTMTLLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTCACTGTGCCGTTATTGATGGCTGAGTTCTATCTGATTATGTCTGCC---------GTA---GGCAAGGTACCAGGA---CGAGTG------------------------------------TTCTGGAAT---CTATTAGGTGGTTCTACTGCTATGTTGCTATTCGGCTATGCTGGTGAG---------ACT------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------AGTCCA------------------CTTATGGGC---TTCGTTCTGTCCATGGCAGCTTGGTTCTATGTAATCTGGTACATC---------------ATT------AAA---GGCGAAGCCAGCAAAGTTAATGCTAGC------TTG---GCAAACCCAAATGTA---CAG---AAA---GCT---TAT---AAG---ACAATG---ACCTTGTTGGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMAEFYLIMSA---V-GKVPG-RV------------FWN-LLGGSTAMLLFGYAGE---T------G--M-----------M----------------------SP------LMG-FVLSMAAWFYVIWYI-----I--K-GEASKVNAS--L-ANPNV-Q-K-A-Y-K-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ929796 [I-Gamma2-a] PRGD_OTU250_otuREP_05e3d0c7c29b2a53722cb28e11b38790 gb|KJ929796| PRGD_OTU250_otuREP_05e3d0c7c29b2a53722cb28e11b38790, putative proteorhodopsin gene, partial cds. PRGD_OTU250_otuREP_05e3d0c7c29b2a53722cb28e11b38790, putative proteorhodopsin gene, partial cds. KJ929796 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGTTAACTGTGCCGTTATTAATGGCAGAGTTTTACTTGATAATGTCAGCGGTAGGCAAAGTACCTGGACGTGTATTCTGGAATCTTTTAGCTGGCACTACAGCTATGCTTCTTTTAGGTTACGCTGGTGAAACTGGCATGATGAATGTAGGCCTCGCCTTTGGTTTATCAATGGCAGCTTGGCTCTACGTTATCTGGTACATTATGATGGGCGAAGCAAGCAAAATTAATGCAAACTTAGCAAATCCACATGTTCAAAAAGCTTACAAGACGATGACGTTATTGGTTACTGTT LLTVPLLMAEFYLIMSAVGKVPGRVFWNLLAGTTAMLLLGYAGETGMMNVGLAFGLSMAAWLYVIWYIMMGEASKINANLANPHVQKAYKTMTLLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTAACTGTGCCGTTATTAATGGCAGAGTTTTACTTGATAATGTCAGCG---------GTA---GGCAAAGTACCTGGA---CGTGTA------------------------------------TTCTGGAAT---CTTTTAGCTGGCACTACAGCTATGCTTCTTTTAGGTTACGCTGGTGAA---------ACT------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------AATGTA------------------GGCCTCGCC---TTTGGTTTATCAATGGCAGCTTGGCTCTACGTTATCTGGTACATT---------------ATG------ATG---GGCGAAGCAAGCAAAATTAATGCAAAC------TTA---GCAAATCCACATGTT---CAA---AAA---GCT---TAC---AAG---ACGATG---ACGTTATTGGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMAEFYLIMSA---V-GKVPG-RV------------FWN-LLAGTTAMLLLGYAGE---T------G--M-----------M----------------------NV------GLA-FGLSMAAWLYVIWYI-----M--M-GEASKINAN--L-ANPHV-Q-K-A-Y-K-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ929797 [I-Gamma2-a] PRGD_OTU250_b39708fda82b5b6cf8068d977cf6b6fb gb|KJ929797| PRGD_OTU250_b39708fda82b5b6cf8068d977cf6b6fb, putative proteorhodopsin gene, partial cds. PRGD_OTU250_b39708fda82b5b6cf8068d977cf6b6fb, putative proteorhodopsin gene, partial cds. KJ929797 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Bering strait marine 67.49 -168.12 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; ; ; 67.49, -168.12) TTATTAACTGTGCCGTTATTAATGGCAGAGTTCTACCTTATTATGTCAGCGGTAGGCAAAGTACCTGGACGTGTATTCTGGAATCTTTTAGCTGGAACCACAGCTATGCTTCTTTTAGGTTACGCTGGTGAAACTGGCATGATGAATGTAGGCCTTGCCTTCGGTTTATCAATGGCAGCTTGGCTATACGTTATCTGGTACATCATGATGGGCGAAGCAAGTAAAATTAATGCAAACTTAGCAAATCCACATGTTCAAAAAGCTTACAAGACGATGACGTTGTTGGTTACTGTT LLTVPLLMAEFYLIMSAVGKVPGRVFWNLLAGTTAMLLLGYAGETGMMNVGLAFGLSMAAWLYVIWYIMMGEASKINANLANPHVQKAYKTMTLLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACTGTGCCGTTATTAATGGCAGAGTTCTACCTTATTATGTCAGCG---------GTA---GGCAAAGTACCTGGA---CGTGTA------------------------------------TTCTGGAAT---CTTTTAGCTGGAACCACAGCTATGCTTCTTTTAGGTTACGCTGGTGAA---------ACT------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------AATGTA------------------GGCCTTGCC---TTCGGTTTATCAATGGCAGCTTGGCTATACGTTATCTGGTACATC---------------ATG------ATG---GGCGAAGCAAGTAAAATTAATGCAAAC------TTA---GCAAATCCACATGTT---CAA---AAA---GCT---TAC---AAG---ACGATG---ACGTTGTTGGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMAEFYLIMSA---V-GKVPG-RV------------FWN-LLAGTTAMLLLGYAGE---T------G--M-----------M----------------------NV------GLA-FGLSMAAWLYVIWYI-----M--M-GEASKINAN--L-ANPHV-Q-K-A-Y-K-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927409 [I-Gamma2-a] PRGD_OTU009_8d0bef862f2f3d79decb54ece0132fc3 gb|KJ927409| PRGD_OTU009_8d0bef862f2f3d79decb54ece0132fc3, putative proteorhodopsin gene, partial cds. PRGD_OTU009_8d0bef862f2f3d79decb54ece0132fc3, putative proteorhodopsin gene, partial cds. KJ927409 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097), English Channel (48.7717, -3.9683) TTACTTACAGTGCCACTCTTAATGGTAGAGTTCTATTTGATTATGTCGGCAGTAGGCAAGGTGCCTGGTCGCGTATTCTGGAATTTACTTGCTGGTTCAACAGCTATGCTGCTATTCGGTTATGCCGGAGAGACTGGCATGATGGGCGTAGGCATGGCCTTTGTTCTATCGATGGCATCTTGGTTCTACGTAATCTGGTACATCATGAAGGGCGAAGCAAGCAAGGTAAATGCAAGTCTTGCTAATGCCAATGTACAGAAAGCCTATAAGACAATGACACTACTAGTGACTGTG LLTVPLLMVEFYLIMSAVGKVPGRVFWNLLAGSTAMLLFGYAGETGMMGVGMAFVLSMASWFYVIWYIMKGEASKVNASLANANVQKAYKTMTLLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTTACAGTGCCACTCTTAATGGTAGAGTTCTATTTGATTATGTCGGCA---------GTA---GGCAAGGTGCCTGGT---CGCGTA------------------------------------TTCTGGAAT---TTACTTGCTGGTTCAACAGCTATGCTGCTATTCGGTTATGCCGGAGAG---------ACT------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GGCGTA------------------GGCATGGCC---TTTGTTCTATCGATGGCATCTTGGTTCTACGTAATCTGGTACATC---------------ATG------AAG---GGCGAAGCAAGCAAGGTAAATGCAAGT------CTT---GCTAATGCCAATGTA---CAG---AAA---GCC---TAT---AAG---ACAATG---ACACTACTAGTGACTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-RV------------FWN-LLAGSTAMLLFGYAGE---T------G--M-----------M----------------------GV------GMA-FVLSMASWFYVIWYI-----M--K-GEASKVNAS--L-ANANV-Q-K-A-Y-K-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927413 [I-Gamma2-a] PRGD_OTU009_943c591e8609f6ff2ead59ad7dcb83ca gb|KJ927413| PRGD_OTU009_943c591e8609f6ff2ead59ad7dcb83ca, putative proteorhodopsin gene, partial cds. PRGD_OTU009_943c591e8609f6ff2ead59ad7dcb83ca, putative proteorhodopsin gene, partial cds. KJ927413 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683), Indian Ocean (-33.28, 45.35) TTACTTACAGTGCCACTCTTAATGGTAGAGTTCTACTTGATTATGTCGGCAGTAGGTAAGGTGCCTGGTCGCGTATTCTGGAATTTACTTGTTGGTTCAACAGCTATGCTGCTATTCGGTTATGCCGGAGAGACTGGCATGATGGGCGTAGGCATGGCCTTTGTTCTATCGATGGCATCTTGGTTCTACGTAATCTGGTACATCATGAAAGGTGAAGCAAGCAAGGTAAATGCAAGTCTTGCTAATGCCAATGTACAGAAAGCTTATAAGACAATGACACTTCTAGTGACTGTT LLTVPLLMVEFYLIMSAVGKVPGRVFWNLLVGSTAMLLFGYAGETGMMGVGMAFVLSMASWFYVIWYIMKGEASKVNASLANANVQKAYKTMTLLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTTACAGTGCCACTCTTAATGGTAGAGTTCTACTTGATTATGTCGGCA---------GTA---GGTAAGGTGCCTGGT---CGCGTA------------------------------------TTCTGGAAT---TTACTTGTTGGTTCAACAGCTATGCTGCTATTCGGTTATGCCGGAGAG---------ACT------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GGCGTA------------------GGCATGGCC---TTTGTTCTATCGATGGCATCTTGGTTCTACGTAATCTGGTACATC---------------ATG------AAA---GGTGAAGCAAGCAAGGTAAATGCAAGT------CTT---GCTAATGCCAATGTA---CAG---AAA---GCT---TAT---AAG---ACAATG---ACACTTCTAGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-RV------------FWN-LLVGSTAMLLFGYAGE---T------G--M-----------M----------------------GV------GMA-FVLSMASWFYVIWYI-----M--K-GEASKVNAS--L-ANANV-Q-K-A-Y-K-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927415 [I-Gamma2-a] PRGD_OTU009_97e6f439bfd5cbf1f220b107002feded gb|KJ927415| PRGD_OTU009_97e6f439bfd5cbf1f220b107002feded, putative proteorhodopsin gene, partial cds. PRGD_OTU009_97e6f439bfd5cbf1f220b107002feded, putative proteorhodopsin gene, partial cds. KJ927415 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTACTTACAGTGCCACTCTTGATGGTAGAGTTCTATCTGATTATGTCGGCAGTAGGCAAAGTGCCTGGTCGCGTATTCTGGAATCTACTTGTTGGTTCAACAGCTATGCTGCTATTCGGTTATGCCGGAGAGACTGGCATGATGGGCGTAGGCATGGCCTTTGTTCTATCAATGGCATCTTGGTTCTATGTAATCTGGTACATCATGAAAGGTGAAGCAAGCAAGGTAAATGCAAGTCTTGCTAACGCCAATGTACAGAAAGCCTATAAGACAATGACACTTCTAGTGACTGTT LLTVPLLMVEFYLIMSAVGKVPGRVFWNLLVGSTAMLLFGYAGETGMMGVGMAFVLSMASWFYVIWYIMKGEASKVNASLANANVQKAYKTMTLLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTTACAGTGCCACTCTTGATGGTAGAGTTCTATCTGATTATGTCGGCA---------GTA---GGCAAAGTGCCTGGT---CGCGTA------------------------------------TTCTGGAAT---CTACTTGTTGGTTCAACAGCTATGCTGCTATTCGGTTATGCCGGAGAG---------ACT------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GGCGTA------------------GGCATGGCC---TTTGTTCTATCAATGGCATCTTGGTTCTATGTAATCTGGTACATC---------------ATG------AAA---GGTGAAGCAAGCAAGGTAAATGCAAGT------CTT---GCTAACGCCAATGTA---CAG---AAA---GCC---TAT---AAG---ACAATG---ACACTTCTAGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-RV------------FWN-LLVGSTAMLLFGYAGE---T------G--M-----------M----------------------GV------GMA-FVLSMASWFYVIWYI-----M--K-GEASKVNAS--L-ANANV-Q-K-A-Y-K-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927417 [I-Gamma2-a] PRGD_OTU009_9ca5ef9c59b8b70f6b28062556b7376e gb|KJ927417| PRGD_OTU009_9ca5ef9c59b8b70f6b28062556b7376e, putative proteorhodopsin gene, partial cds. PRGD_OTU009_9ca5ef9c59b8b70f6b28062556b7376e, putative proteorhodopsin gene, partial cds. KJ927417 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683) TTACTTACAGTGCCACTCTTGATGGTAGAGTTCTATTTGATTATGTCGGCAGTAGGCAAAGTGCCTGGTCGCGTATTCTGGAATCTCCTCGTTGGTTCAACTGCTATGCTGCTATTCGGTTATGCCGGAGAGACTGGCATGATGGGCGTAGGCATGGCCTTTGTTCTATCGATGGCATCTTGGTTCTACGTAATCTGGTACATCATGAAAGGTGAAGCAAGCAAGGTAAATGCAAGTCTTGCTAATGCCAATGTACAAAAAGCCTATAAGACAATGACACTTCTAGTGACTGTT LLTVPLLMVEFYLIMSAVGKVPGRVFWNLLVGSTAMLLFGYAGETGMMGVGMAFVLSMASWFYVIWYIMKGEASKVNASLANANVQKAYKTMTLLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTTACAGTGCCACTCTTGATGGTAGAGTTCTATTTGATTATGTCGGCA---------GTA---GGCAAAGTGCCTGGT---CGCGTA------------------------------------TTCTGGAAT---CTCCTCGTTGGTTCAACTGCTATGCTGCTATTCGGTTATGCCGGAGAG---------ACT------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GGCGTA------------------GGCATGGCC---TTTGTTCTATCGATGGCATCTTGGTTCTACGTAATCTGGTACATC---------------ATG------AAA---GGTGAAGCAAGCAAGGTAAATGCAAGT------CTT---GCTAATGCCAATGTA---CAA---AAA---GCC---TAT---AAG---ACAATG---ACACTTCTAGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-RV------------FWN-LLVGSTAMLLFGYAGE---T------G--M-----------M----------------------GV------GMA-FVLSMASWFYVIWYI-----M--K-GEASKVNAS--L-ANANV-Q-K-A-Y-K-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927408 [I-Gamma2-a] PRGD_OTU009_878ca9d1c859755c181892dba3dd5b1a gb|KJ927408| PRGD_OTU009_878ca9d1c859755c181892dba3dd5b1a, putative proteorhodopsin gene, partial cds. PRGD_OTU009_878ca9d1c859755c181892dba3dd5b1a, putative proteorhodopsin gene, partial cds. KJ927408 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683) TTACTTACAGTGCCACTCTTAATGGTAGAGTTCTATTTGATTATGTCGGCAGTAGGCAAGGTGCCTGGTCGCGTATTCTGGAATCTACTAGTTGGTTCAACAGCTATGCTGCTATTCGGTTATGCCGGAGAGACTGGCATGATGGGCGTAGGCATGGCCTTTGTTCTATCGATGGCATCTTGGTTCTACGTAATCTGGTACATCATGAAAGGTGAAGCAAGCAAGGTAAATGCAAGTCTTGCTAATGCCAATGTACAGAAAGCCTATAAGACAATGACACTTCTAGTGACTGTT LLTVPLLMVEFYLIMSAVGKVPGRVFWNLLVGSTAMLLFGYAGETGMMGVGMAFVLSMASWFYVIWYIMKGEASKVNASLANANVQKAYKTMTLLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTTACAGTGCCACTCTTAATGGTAGAGTTCTATTTGATTATGTCGGCA---------GTA---GGCAAGGTGCCTGGT---CGCGTA------------------------------------TTCTGGAAT---CTACTAGTTGGTTCAACAGCTATGCTGCTATTCGGTTATGCCGGAGAG---------ACT------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GGCGTA------------------GGCATGGCC---TTTGTTCTATCGATGGCATCTTGGTTCTACGTAATCTGGTACATC---------------ATG------AAA---GGTGAAGCAAGCAAGGTAAATGCAAGT------CTT---GCTAATGCCAATGTA---CAG---AAA---GCC---TAT---AAG---ACAATG---ACACTTCTAGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-RV------------FWN-LLVGSTAMLLFGYAGE---T------G--M-----------M----------------------GV------GMA-FVLSMASWFYVIWYI-----M--K-GEASKVNAS--L-ANANV-Q-K-A-Y-K-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927378 [I-Gamma2-a] PRGD_OTU009_0474b7a1e5b60eeb0f3deca98c20f2d3 gb|KJ927378| PRGD_OTU009_0474b7a1e5b60eeb0f3deca98c20f2d3, putative proteorhodopsin gene, partial cds. PRGD_OTU009_0474b7a1e5b60eeb0f3deca98c20f2d3, putative proteorhodopsin gene, partial cds. KJ927378 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTACTTACAGTGCCACTCTTGATGGTAGAGTTCTATTTGATTATGTCGGCAGTAGGCAAGGTGCCTGGTCGCGTATTCTGGAATCTACTAGTTGGTTCAACAGCTATGCTGCTATTCGGTTATGCCGGAGAGACTGGCATGATGGGCGTAGGCATGGCCTTTGTTCTATCGATGGCATCTTGGTTCTACGTAATCTGGTACATCATGAAAGGTGAAGCAAGTAAGGTAAATGCGAGTCTTGCTAATGCCAATGTACAAAAAGCTTACAAGACAATGACACTTCTAGTGACTGTG LLTVPLLMVEFYLIMSAVGKVPGRVFWNLLVGSTAMLLFGYAGETGMMGVGMAFVLSMASWFYVIWYIMKGEASKVNASLANANVQKAYKTMTLLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTTACAGTGCCACTCTTGATGGTAGAGTTCTATTTGATTATGTCGGCA---------GTA---GGCAAGGTGCCTGGT---CGCGTA------------------------------------TTCTGGAAT---CTACTAGTTGGTTCAACAGCTATGCTGCTATTCGGTTATGCCGGAGAG---------ACT------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GGCGTA------------------GGCATGGCC---TTTGTTCTATCGATGGCATCTTGGTTCTACGTAATCTGGTACATC---------------ATG------AAA---GGTGAAGCAAGTAAGGTAAATGCGAGT------CTT---GCTAATGCCAATGTA---CAA---AAA---GCT---TAC---AAG---ACAATG---ACACTTCTAGTGACTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-RV------------FWN-LLVGSTAMLLFGYAGE---T------G--M-----------M----------------------GV------GMA-FVLSMASWFYVIWYI-----M--K-GEASKVNAS--L-ANANV-Q-K-A-Y-K-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927392 [I-Gamma2-a] PRGD_OTU009_3afcd32eb415365e7b35170dac4ccc6e gb|KJ927392| PRGD_OTU009_3afcd32eb415365e7b35170dac4ccc6e, putative proteorhodopsin gene, partial cds. PRGD_OTU009_3afcd32eb415365e7b35170dac4ccc6e, putative proteorhodopsin gene, partial cds. KJ927392 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCTTAACCGTGCCACTATTGATGGTTGAATTCTACCTAATTATGTCTGCGGTAGGTAAGGTACCTGGTCGCGTATTCTGGAATCTTCTTGTCGGTTCAACCGCAATGTTGTTATTTGGTTATGCCGGAGAGACTGGAATGATGGGTGTAGGCATGGCCTTCGTTCTATCAATGGCATCTTGGTTCTATGTTATTTGGTACATTGTTAAAGGTGAAGCAAGCAAAGTTAATGCTAGTCTTGCCAATGCTAATGTTCAAAAAGCCTATAAAACTATGACATTGCTTGTTACTGTC LLTVPLLMVEFYLIMSAVGKVPGRVFWNLLVGSTAMLLFGYAGETGMMGVGMAFVLSMASWFYVIWYIVKGEASKVNASLANANVQKAYKTMTLLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACCGTGCCACTATTGATGGTTGAATTCTACCTAATTATGTCTGCG---------GTA---GGTAAGGTACCTGGT---CGCGTA------------------------------------TTCTGGAAT---CTTCTTGTCGGTTCAACCGCAATGTTGTTATTTGGTTATGCCGGAGAG---------ACT------------------GGA------ATG---------------------------------ATG------------------------------------------------------------------GGTGTA------------------GGCATGGCC---TTCGTTCTATCAATGGCATCTTGGTTCTATGTTATTTGGTACATT---------------GTT------AAA---GGTGAAGCAAGCAAAGTTAATGCTAGT------CTT---GCCAATGCTAATGTT---CAA---AAA---GCC---TAT---AAA---ACTATG---ACATTGCTTGTTACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-RV------------FWN-LLVGSTAMLLFGYAGE---T------G--M-----------M----------------------GV------GMA-FVLSMASWFYVIWYI-----V--K-GEASKVNAS--L-ANANV-Q-K-A-Y-K-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927407 [I-Gamma2-a] PRGD_OTU009_83b66ebc8070290e5470e38ba8a0a032 gb|KJ927407| PRGD_OTU009_83b66ebc8070290e5470e38ba8a0a032, putative proteorhodopsin gene, partial cds. PRGD_OTU009_83b66ebc8070290e5470e38ba8a0a032, putative proteorhodopsin gene, partial cds. KJ927407 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) CTCTTAACCGTGCCACTGTTGATGGTTGAATTCTACCTAATCATGTCTGCGGTAGGTAAGGTACCTGGTCGCGTATTCTGGAATCTTCTTATCGGTTCAACCGCTATGTTGCTGTTCGGTTATGCCGGAGAGACTGGAATGATGGGTGTAGGCATGGCCTTCGTTCTATCAATGGCGTCTTGGTTCTATGTTATTTGGTACATTATTAAAGGTGAAGCTAGCAAGGTTAATGCTAGTCTTGCCAATGCTAATGTTCAGAAAGCCTACAAAACTATGACATTGCTTGTTACTGTC LLTVPLLMVEFYLIMSAVGKVPGRVFWNLLIGSTAMLLFGYAGETGMMGVGMAFVLSMASWFYVIWYIIKGEASKVNASLANANVQKAYKTMTLLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAACCGTGCCACTGTTGATGGTTGAATTCTACCTAATCATGTCTGCG---------GTA---GGTAAGGTACCTGGT---CGCGTA------------------------------------TTCTGGAAT---CTTCTTATCGGTTCAACCGCTATGTTGCTGTTCGGTTATGCCGGAGAG---------ACT------------------GGA------ATG---------------------------------ATG------------------------------------------------------------------GGTGTA------------------GGCATGGCC---TTCGTTCTATCAATGGCGTCTTGGTTCTATGTTATTTGGTACATT---------------ATT------AAA---GGTGAAGCTAGCAAGGTTAATGCTAGT------CTT---GCCAATGCTAATGTT---CAG---AAA---GCC---TAC---AAA---ACTATG---ACATTGCTTGTTACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-RV------------FWN-LLIGSTAMLLFGYAGE---T------G--M-----------M----------------------GV------GMA-FVLSMASWFYVIWYI-----I--K-GEASKVNAS--L-ANANV-Q-K-A-Y-K-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927395 [I-Gamma2-a] PRGD_OTU009_4b5576711433c7dca222da11bb2768b3 gb|KJ927395| PRGD_OTU009_4b5576711433c7dca222da11bb2768b3, putative proteorhodopsin gene, partial cds. PRGD_OTU009_4b5576711433c7dca222da11bb2768b3, putative proteorhodopsin gene, partial cds. KJ927395 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683) CTGTTAACAGTGCCGCTCTTAATGGTTGAATTCTACCTAATTATGTCTGCGGTAGGTAAAGTGCCTGGTCGCGTTTTCTGGAATCTTCTAATCGGTTCAACAGCGATGTTGCTATTCGGTTATGCAGGAGAGACTGGCATGATGGGTGTAGGCATGGCCTTTGTACTATCAATGGCATCTTGGTTCTATGTTATTTGGTACATTATTAAAGGTGAAGCAAGTAAAGTTAATGCTAGTCTTGCCAATGCTAATGTTCAAAAAGCCTATAAAACAATGACATTACTTGTGACTGTC LLTVPLLMVEFYLIMSAVGKVPGRVFWNLLIGSTAMLLFGYAGETGMMGVGMAFVLSMASWFYVIWYIIKGEASKVNASLANANVQKAYKTMTLLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACAGTGCCGCTCTTAATGGTTGAATTCTACCTAATTATGTCTGCG---------GTA---GGTAAAGTGCCTGGT---CGCGTT------------------------------------TTCTGGAAT---CTTCTAATCGGTTCAACAGCGATGTTGCTATTCGGTTATGCAGGAGAG---------ACT------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GGTGTA------------------GGCATGGCC---TTTGTACTATCAATGGCATCTTGGTTCTATGTTATTTGGTACATT---------------ATT------AAA---GGTGAAGCAAGTAAAGTTAATGCTAGT------CTT---GCCAATGCTAATGTT---CAA---AAA---GCC---TAT---AAA---ACAATG---ACATTACTTGTGACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-RV------------FWN-LLIGSTAMLLFGYAGE---T------G--M-----------M----------------------GV------GMA-FVLSMASWFYVIWYI-----I--K-GEASKVNAS--L-ANANV-Q-K-A-Y-K-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927410 [I-Gamma2-a] PRGD_OTU009_8dcf12f8c658423101803791f5b1d9e4 gb|KJ927410| PRGD_OTU009_8dcf12f8c658423101803791f5b1d9e4, putative proteorhodopsin gene, partial cds. PRGD_OTU009_8dcf12f8c658423101803791f5b1d9e4, putative proteorhodopsin gene, partial cds. KJ927410 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) CTGTTAACAGTGCCACTCTTGATGGTTGAATTCTACCTAATTATGTCTGCGGTAGGTAAAGTGCCTGGTCGCGTTTTCTGGAATCTTCTAATCGGTTCAACAGCGATGTTGCTATTCGGTTATGCAGGAGAGACTGGCATGATGGGTGTAGGCATGGCCTTTGTACTATCAATGGCATCTTGGTTTTATGTTATTTGGTACATTATCAAAGGTGAAGCAAGTAAAGTTAATGCTAGTCTTGCCAATGCTAATGTTCAAAAAGCCTATAAAACAATGACATTACTTGTGACTGTC LLTVPLLMVEFYLIMSAVGKVPGRVFWNLLIGSTAMLLFGYAGETGMMGVGMAFVLSMASWFYVIWYIIKGEASKVNASLANANVQKAYKTMTLLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAACAGTGCCACTCTTGATGGTTGAATTCTACCTAATTATGTCTGCG---------GTA---GGTAAAGTGCCTGGT---CGCGTT------------------------------------TTCTGGAAT---CTTCTAATCGGTTCAACAGCGATGTTGCTATTCGGTTATGCAGGAGAG---------ACT------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GGTGTA------------------GGCATGGCC---TTTGTACTATCAATGGCATCTTGGTTTTATGTTATTTGGTACATT---------------ATC------AAA---GGTGAAGCAAGTAAAGTTAATGCTAGT------CTT---GCCAATGCTAATGTT---CAA---AAA---GCC---TAT---AAA---ACAATG---ACATTACTTGTGACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-RV------------FWN-LLIGSTAMLLFGYAGE---T------G--M-----------M----------------------GV------GMA-FVLSMASWFYVIWYI-----I--K-GEASKVNAS--L-ANANV-Q-K-A-Y-K-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ927427 [I-Gamma2-a] PRGD_OTU009_c071c63c45200982a91ea08144d7e392 gb|KJ927427| PRGD_OTU009_c071c63c45200982a91ea08144d7e392, putative proteorhodopsin gene, partial cds. PRGD_OTU009_c071c63c45200982a91ea08144d7e392, putative proteorhodopsin gene, partial cds. KJ927427 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), Indian Ocean (-23.5956, 69.0419) CTACTAACAGTGCCACTCTTGATGGTTGAATTCTATCTAATCATGTCAGCAGTAGGTAAAGTACCTGGACGCGTATTCTGGAATCTTCTAATCGGTTCAACAGCAATGTTGTTATTCGGTTATGCAGGAGAAACTGGAATTATGGGCGTAGGTACGGCCTTCATTCTATCAATGGCATCTTGGTTCTATGTTATTTGGTACATTATTAAAGGTGAAGCAAGTCAGGTTAATGCTAGTCTTGCAAATGCCAATGTACAAAAGGCTTACAAGACCATGACATTGCTAGTGACTTTT LLTVPLLMVEFYLIMSAVGKVPGRVFWNLLIGSTAMLLFGYAGETGIMGVGTAFILSMASWFYVIWYIIKGEASQVNASLANANVQKAYKTMTLLVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTAACAGTGCCACTCTTGATGGTTGAATTCTATCTAATCATGTCAGCA---------GTA---GGTAAAGTACCTGGA---CGCGTA------------------------------------TTCTGGAAT---CTTCTAATCGGTTCAACAGCAATGTTGTTATTCGGTTATGCAGGAGAA---------ACT------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------GGCGTA------------------GGTACGGCC---TTCATTCTATCAATGGCATCTTGGTTCTATGTTATTTGGTACATT---------------ATT------AAA---GGTGAAGCAAGTCAGGTTAATGCTAGT------CTT---GCAAATGCCAATGTA---CAA---AAG---GCT---TAC---AAG---ACCATG---ACATTGCTAGTGACTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-RV------------FWN-LLIGSTAMLLFGYAGE---T------G--I-----------M----------------------GV------GTA-FILSMASWFYVIWYI-----I--K-GEASQVNAS--L-ANANV-Q-K-A-Y-K-TM-TLLVTF-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ929657 [I-Gamma2-a] PRGD_OTU184_4336ce002dd7720b4d72c4aa41cf5df8 gb|KJ929657| PRGD_OTU184_4336ce002dd7720b4d72c4aa41cf5df8, putative proteorhodopsin gene, partial cds. PRGD_OTU184_4336ce002dd7720b4d72c4aa41cf5df8, putative proteorhodopsin gene, partial cds. KJ929657 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCCTTACTGTACCTCTGCTAATGGTTGAGTTTTACTTGATTATGTCAGCGGTTGGTAAAGTTCCTGGATCTGTATTCCGAACGCTCTTAGTTGGTACTACAGCTATGCTAGTCTTCGGATATATGGGTGAGACTAATATTATGCCTGTCATGCCAGCTTTTGTTCTCTCAATGGCATGCTGGTTGTATGTAATTTGGTACATCATCAAAGGGGAAGCAGCTTCAGTAAATGCTTCTTTGGCCAATGAGCATGTGCAGAAAGCCTACAAAACGATGACGCTTTTAGTTTCGGTT LLTVPLLMVEFYLIMSAVGKVPGSVFRTLLVGTTAMLVFGYMGETNIMPVMPAFVLSMACWLYVIWYIIKGEAASVNASLANEHVQKAYKTMTLLVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTTACTGTACCTCTGCTAATGGTTGAGTTTTACTTGATTATGTCAGCG---------GTT---GGTAAAGTTCCTGGA---TCTGTA------------------------------------TTCCGAACG---CTCTTAGTTGGTACTACAGCTATGCTAGTCTTCGGATATATGGGTGAG---------ACT------------------AAT------ATT---------------------------------ATG------------------------------------------------------------------CCTGTC------------------ATGCCAGCT---TTTGTTCTCTCAATGGCATGCTGGTTGTATGTAATTTGGTACATC---------------ATC------AAA---GGGGAAGCAGCTTCAGTAAATGCTTCT------TTG---GCCAATGAGCATGTG---CAG---AAA---GCC---TAC---AAA---ACGATG---ACGCTTTTAGTTTCGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-SV------------FRT-LLVGTTAMLVFGYMGE---T------N--I-----------M----------------------PV------MPA-FVLSMACWLYVIWYI-----I--K-GEAASVNAS--L-ANEHV-Q-K-A-Y-K-TM-TLLVSV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ929658 [I-Gamma2-a] PRGD_OTU184_77df639076d7ab51c500162a9ac61a09 gb|KJ929658| PRGD_OTU184_77df639076d7ab51c500162a9ac61a09, putative proteorhodopsin gene, partial cds. PRGD_OTU184_77df639076d7ab51c500162a9ac61a09, putative proteorhodopsin gene, partial cds. KJ929658 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCCTTACTGTACCTCTGCTAATGGTTGAGTTTTACTTGATTATGTCAGCGGTTGGTAAAGTTCCTGGATCTGTATTCCGAACGCTCTTAGTTGGTACTACAGCCATGCTAGTCTTCGGATATATGGGTGAGACTAATATTATGCCTGTCATGCCAGCTTTTGTTCTCTCAATGGCATGCTGGTTGTATGTAATTTGGTACATCATCAAAGGGGAAGCAGCTTCAGTAAATGCTTCTTTGGCCAATGAGCATGTGCAGAAAGCCTACAAAACGATGACGCTTTTAGTTTCAGTT LLTVPLLMVEFYLIMSAVGKVPGSVFRTLLVGTTAMLVFGYMGETNIMPVMPAFVLSMACWLYVIWYIIKGEAASVNASLANEHVQKAYKTMTLLVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTTACTGTACCTCTGCTAATGGTTGAGTTTTACTTGATTATGTCAGCG---------GTT---GGTAAAGTTCCTGGA---TCTGTA------------------------------------TTCCGAACG---CTCTTAGTTGGTACTACAGCCATGCTAGTCTTCGGATATATGGGTGAG---------ACT------------------AAT------ATT---------------------------------ATG------------------------------------------------------------------CCTGTC------------------ATGCCAGCT---TTTGTTCTCTCAATGGCATGCTGGTTGTATGTAATTTGGTACATC---------------ATC------AAA---GGGGAAGCAGCTTCAGTAAATGCTTCT------TTG---GCCAATGAGCATGTG---CAG---AAA---GCC---TAC---AAA---ACGATG---ACGCTTTTAGTTTCAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-SV------------FRT-LLVGTTAMLVFGYMGE---T------N--I-----------M----------------------PV------MPA-FVLSMACWLYVIWYI-----I--K-GEAASVNAS--L-ANEHV-Q-K-A-Y-K-TM-TLLVSV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ929656 [I-Gamma2-a] PRGD_OTU184_otuREP_be6e8e44f094fd48a4761bd280ebc9dc gb|KJ929656| PRGD_OTU184_otuREP_be6e8e44f094fd48a4761bd280ebc9dc, putative proteorhodopsin gene, partial cds. PRGD_OTU184_otuREP_be6e8e44f094fd48a4761bd280ebc9dc, putative proteorhodopsin gene, partial cds. KJ929656 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/D subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 D subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTCCTTACTGTACCTCTGCTAATGGTTGAGTTTTACTTGATTATGTCAGCAGTTGGTAAAGTTCCTGGATCTGTATTCCGAACGCTCTTAGTTGGTACTACAGCCATGCTAGTCTTCGGATATATGGGTGAGACTAATATTATGCCTGTCATGCCAGCTTTTGTTCTCTCAATGGCATGCTGGTTGTATGTAATTTGGTACATCATCAAAGGTGAAGCAGCTTCAGTAAATGCTTCATTGGCCAATGAGCATGTGCAGAAAGCCTACAAAACAATGACGATTTTAGTTTCGTTT LLTVPLLMVEFYLIMSAVGKVPGSVFRTLLVGTTAMLVFGYMGETNIMPVMPAFVLSMACWLYVIWYIIKGEAASVNASLANEHVQKAYKTMTILVSF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTTACTGTACCTCTGCTAATGGTTGAGTTTTACTTGATTATGTCAGCA---------GTT---GGTAAAGTTCCTGGA---TCTGTA------------------------------------TTCCGAACG---CTCTTAGTTGGTACTACAGCCATGCTAGTCTTCGGATATATGGGTGAG---------ACT------------------AAT------ATT---------------------------------ATG------------------------------------------------------------------CCTGTC------------------ATGCCAGCT---TTTGTTCTCTCAATGGCATGCTGGTTGTATGTAATTTGGTACATC---------------ATC------AAA---GGTGAAGCAGCTTCAGTAAATGCTTCA------TTG---GCCAATGAGCATGTG---CAG---AAA---GCC---TAC---AAA---ACAATG---ACGATTTTAGTTTCGTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMVEFYLIMSA---V-GKVPG-SV------------FRT-LLVGTTAMLVFGYMGE---T------N--I-----------M----------------------PV------MPA-FVLSMACWLYVIWYI-----I--K-GEAASVNAS--L-ANEHV-Q-K-A-Y-K-TM-TILVSF-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-SAR92]_KJ929185 [I-Gamma2-SAR92] PRGD_OTU085_43c7dff50f16a3c5693c1eaa637477e0 gb|KJ929185| PRGD_OTU085_43c7dff50f16a3c5693c1eaa637477e0, putative proteorhodopsin gene, partial cds. PRGD_OTU085_43c7dff50f16a3c5693c1eaa637477e0, putative proteorhodopsin gene, partial cds. KJ929185 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; ; 67.49, -168.12) TTGCTAACTGTGCCGCTGCTAATGATTGAGTTCTATTTGATCTTAACTGCAGTTGCCAAAGTGCCTGGCGGAGTCTTCTGGCGCTTGTTGGTCGGCTCTGTTGTCATGCTCGGCTTTGGATTTGCTGGTGAAACAGGAATGATGGACGTGCAGTTGGCATTCTGGCCAGCAATGGCGGCATGGGGCTTCATTATCTGGGAAATCTTCAAAGGTGAAGCAAGTCAGATCAATGCCGGTCTTTCTAATGACCATGTGCAGAAAGCTTACAGGACAATGACCCTTCTTGTGACTGTA LLTVPLLMIEFYLILTAVAKVPGGVFWRLLVGSVVMLGFGFAGETGMMDVQLAFWPAMAAWGFIIWEIFKGEASQINAGLSNDHVQKAYRTMTLLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTAACTGTGCCGCTGCTAATGATTGAGTTCTATTTGATCTTAACTGCA---------GTT---GCCAAAGTGCCTGGC---GGAGTC------------------------------------TTCTGGCGC---TTGTTGGTCGGCTCTGTTGTCATGCTCGGCTTTGGATTTGCTGGTGAA---------ACA------------------GGA------ATG---------------------------------ATG------------------------------------------------------------------GACGTG------------------CAGTTGGCA---TTCTGGCCAGCAATGGCGGCATGGGGCTTCATTATCTGGGAAATC---------------TTC------AAA---GGTGAAGCAAGTCAGATCAATGCCGGT------CTT---TCTAATGACCATGTG---CAG---AAA---GCT---TAC---AGG---ACAATG---ACCCTTCTTGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILTA---V-AKVPG-GV------------FWR-LLVGSVVMLGFGFAGE---T------G--M-----------M----------------------DV------QLA-FWPAMAAWGFIIWEI-----F--K-GEASQINAG--L-SNDHV-Q-K-A-Y-R-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-SAR92]_KJ929189 [I-Gamma2-SAR92] PRGD_OTU085_9fe973e0498aa5bba81d899f0ad0fab8 gb|KJ929189| PRGD_OTU085_9fe973e0498aa5bba81d899f0ad0fab8, putative proteorhodopsin gene, partial cds. PRGD_OTU085_9fe973e0498aa5bba81d899f0ad0fab8, putative proteorhodopsin gene, partial cds. KJ929189 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833) TTGCTGACTGTGCCGCTGCTAATGATTGAGTTCTATTTGATCTTAACCGCAGTTGCCAAAGTGCCTGGCGGAGTTTTTTGGCGCTTGTTGGTCGGCTCTGTTGTCATGCTCGGCTTTGGATTTGCTGGTGAAACAGGCATGATGGACGTGCAGTTGGCATTCTGGCCAGCAATGGCGGCATGGGGCTTCATTATCTGGGAAATCTTCAAAGGTGAAGCAAGCCAGATCAATGCCGGTCTTTCTAATGACCATGTGCAGAAAGCTTATAGGACAATGACCCTGCTTGTGACTGTA LLTVPLLMIEFYLILTAVAKVPGGVFWRLLVGSVVMLGFGFAGETGMMDVQLAFWPAMAAWGFIIWEIFKGEASQINAGLSNDHVQKAYRTMTLLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTGACTGTGCCGCTGCTAATGATTGAGTTCTATTTGATCTTAACCGCA---------GTT---GCCAAAGTGCCTGGC---GGAGTT------------------------------------TTTTGGCGC---TTGTTGGTCGGCTCTGTTGTCATGCTCGGCTTTGGATTTGCTGGTGAA---------ACA------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GACGTG------------------CAGTTGGCA---TTCTGGCCAGCAATGGCGGCATGGGGCTTCATTATCTGGGAAATC---------------TTC------AAA---GGTGAAGCAAGCCAGATCAATGCCGGT------CTT---TCTAATGACCATGTG---CAG---AAA---GCT---TAT---AGG---ACAATG---ACCCTGCTTGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILTA---V-AKVPG-GV------------FWR-LLVGSVVMLGFGFAGE---T------G--M-----------M----------------------DV------QLA-FWPAMAAWGFIIWEI-----F--K-GEASQINAG--L-SNDHV-Q-K-A-Y-R-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-SAR92]_KJ929187 [I-Gamma2-SAR92] PRGD_OTU085_74a8f1ce7921989c428ddc6cc9871244 gb|KJ929187| PRGD_OTU085_74a8f1ce7921989c428ddc6cc9871244, putative proteorhodopsin gene, partial cds. PRGD_OTU085_74a8f1ce7921989c428ddc6cc9871244, putative proteorhodopsin gene, partial cds. KJ929187 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-35.05, 23.73) TTGCTAACTGTGCCGCTGCTAATGATTGAGTTCTATTTGATCTTAACCGCAGTTGCCAAAGTGCCTGGCGGAGTTTTCTGGCGCTTGTTGGTCGGCTCTGTTGTCATGCTCGGCTTTGGATTTGCTGGTGAAACAGGCATGATGGACGTGCAGTTGGCATTCTGGCCAGCAATGGCGGCATGGGGCTTCATTATCTGGGAAATCTTCAAAGGTGAAGCAAGCCAGATCAATGCCGGTCTTTCTAACGACCATGTGCAGAAAGCTTATAGGACAATGACCCTTCTTGTGACTGTA LLTVPLLMIEFYLILTAVAKVPGGVFWRLLVGSVVMLGFGFAGETGMMDVQLAFWPAMAAWGFIIWEIFKGEASQINAGLSNDHVQKAYRTMTLLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTAACTGTGCCGCTGCTAATGATTGAGTTCTATTTGATCTTAACCGCA---------GTT---GCCAAAGTGCCTGGC---GGAGTT------------------------------------TTCTGGCGC---TTGTTGGTCGGCTCTGTTGTCATGCTCGGCTTTGGATTTGCTGGTGAA---------ACA------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GACGTG------------------CAGTTGGCA---TTCTGGCCAGCAATGGCGGCATGGGGCTTCATTATCTGGGAAATC---------------TTC------AAA---GGTGAAGCAAGCCAGATCAATGCCGGT------CTT---TCTAACGACCATGTG---CAG---AAA---GCT---TAT---AGG---ACAATG---ACCCTTCTTGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILTA---V-AKVPG-GV------------FWR-LLVGSVVMLGFGFAGE---T------G--M-----------M----------------------DV------QLA-FWPAMAAWGFIIWEI-----F--K-GEASQINAG--L-SNDHV-Q-K-A-Y-R-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-SAR92]_KJ929186 [I-Gamma2-SAR92] PRGD_OTU085_67d7f0536e39aedab0bbc723537dfdba gb|KJ929186| PRGD_OTU085_67d7f0536e39aedab0bbc723537dfdba, putative proteorhodopsin gene, partial cds. PRGD_OTU085_67d7f0536e39aedab0bbc723537dfdba, putative proteorhodopsin gene, partial cds. KJ929186 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Bering strait marine 67.49 -168.12 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185; 67.49, -168.12), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTGCTAACTGTGCCGCTGCTAATGATTGAGTTCTACTTGATCTTGTCTGCAGTCGCCAAAGTGCCTAGCGGTGTTTTCTGGCGCTTGTTGGTCGGCTCCGTTGTTATGCTTGGCTTTGGCTTTGCTGGTGAAACAGGCATGATGTCCGCGCAGTTGGCATTCTGGCCAGCAATGGCAGCATGGGGCTTCATTATCTGGGAAATCTTCAAAGGCGAAGCAAGCCAGATCAATGCAGGCCTTTCGAACGACCATGTGCAGAAGGCTTATAGGACAATGACTCTTCTTGTAACTGTA LLTVPLLMIEFYLILSAVAKVPSGVFWRLLVGSVVMLGFGFAGETGMMSAQLAFWPAMAAWGFIIWEIFKGEASQINAGLSNDHVQKAYRTMTLLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTAACTGTGCCGCTGCTAATGATTGAGTTCTACTTGATCTTGTCTGCA---------GTC---GCCAAAGTGCCTAGC---GGTGTT------------------------------------TTCTGGCGC---TTGTTGGTCGGCTCCGTTGTTATGCTTGGCTTTGGCTTTGCTGGTGAA---------ACA------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------TCCGCG------------------CAGTTGGCA---TTCTGGCCAGCAATGGCAGCATGGGGCTTCATTATCTGGGAAATC---------------TTC------AAA---GGCGAAGCAAGCCAGATCAATGCAGGC------CTT---TCGAACGACCATGTG---CAG---AAG---GCT---TAT---AGG---ACAATG---ACTCTTCTTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILSA---V-AKVPS-GV------------FWR-LLVGSVVMLGFGFAGE---T------G--M-----------M----------------------SA------QLA-FWPAMAAWGFIIWEI-----F--K-GEASQINAG--L-SNDHV-Q-K-A-Y-R-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-SAR92]_KJ929190 [I-Gamma2-SAR92] PRGD_OTU085_bc47341902655937344c9bc2d158375a gb|KJ929190| PRGD_OTU085_bc47341902655937344c9bc2d158375a, putative proteorhodopsin gene, partial cds. PRGD_OTU085_bc47341902655937344c9bc2d158375a, putative proteorhodopsin gene, partial cds. KJ929190 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185), English Channel (48.7717, -3.9683) TTGCTGACTGTGCCGCTGCTAATGATTGAGTTCTACTTGATCTTGTCTGCAGTCGCCAAAGTGCCTGGCGGTGTTTTCTGGCGCTTGTTGGTCGGCTCTGTTGTTATGCTCGGCTTTGGCTTTGCTGGTGAAACAGACATGATGTCCGCGCAGTTGGCCTTCTGGCCAGCAATGGCAGCATGGGGCTTCATTATCTGGGAAATCTTCAAAGGCGAAGCAAGCCAGATCAATGCAGGCCTTTCGAACGATCATGTGCAGAAAGCTTATAGGACAATGACCCTTCTTGTAACTGTA LLTVPLLMIEFYLILSAVAKVPGGVFWRLLVGSVVMLGFGFAGETDMMSAQLAFWPAMAAWGFIIWEIFKGEASQINAGLSNDHVQKAYRTMTLLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTGACTGTGCCGCTGCTAATGATTGAGTTCTACTTGATCTTGTCTGCA---------GTC---GCCAAAGTGCCTGGC---GGTGTT------------------------------------TTCTGGCGC---TTGTTGGTCGGCTCTGTTGTTATGCTCGGCTTTGGCTTTGCTGGTGAA---------ACA------------------GAC------ATG---------------------------------ATG------------------------------------------------------------------TCCGCG------------------CAGTTGGCC---TTCTGGCCAGCAATGGCAGCATGGGGCTTCATTATCTGGGAAATC---------------TTC------AAA---GGCGAAGCAAGCCAGATCAATGCAGGC------CTT---TCGAACGATCATGTG---CAG---AAA---GCT---TAT---AGG---ACAATG---ACCCTTCTTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILSA---V-AKVPG-GV------------FWR-LLVGSVVMLGFGFAGE---T------D--M-----------M----------------------SA------QLA-FWPAMAAWGFIIWEI-----F--K-GEASQINAG--L-SNDHV-Q-K-A-Y-R-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-SAR92]_KJ929183 [I-Gamma2-SAR92] PRGD_OTU085_otuREP_802ad5db0df2f8506852bd365252c7e1 gb|KJ929183| PRGD_OTU085_otuREP_802ad5db0df2f8506852bd365252c7e1, putative proteorhodopsin gene, partial cds. PRGD_OTU085_otuREP_802ad5db0df2f8506852bd365252c7e1, putative proteorhodopsin gene, partial cds. KJ929183 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45; -33.28, 45.35) TTGCTAACTGTGCCGCTGCTAATGATTGAGTTCTACTTGATCTTGTCTGCAGTCGCCAAAGTGCCTGGCGGTGTTTTCTGGCGCTTGTTGGTCGGCTCTGTTGTTATGCTCGGCTTTGGCTTTGCTGGTGAAACAGGCATGATGTCCGCGCAGTTGGCATTCTGGCCAGCAATGGCAGCATGGGGCTTCATTATCTGGGAAATCTTCAAAGGCGAAGCAAGCCAGATCAATGCAGGCCTTTCGAACGACCATGTGCAGAAAGCTTATAGGACAATGACCCTTCTTGTAACTGTA LLTVPLLMIEFYLILSAVAKVPGGVFWRLLVGSVVMLGFGFAGETGMMSAQLAFWPAMAAWGFIIWEIFKGEASQINAGLSNDHVQKAYRTMTLLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTAACTGTGCCGCTGCTAATGATTGAGTTCTACTTGATCTTGTCTGCA---------GTC---GCCAAAGTGCCTGGC---GGTGTT------------------------------------TTCTGGCGC---TTGTTGGTCGGCTCTGTTGTTATGCTCGGCTTTGGCTTTGCTGGTGAA---------ACA------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------TCCGCG------------------CAGTTGGCA---TTCTGGCCAGCAATGGCAGCATGGGGCTTCATTATCTGGGAAATC---------------TTC------AAA---GGCGAAGCAAGCCAGATCAATGCAGGC------CTT---TCGAACGACCATGTG---CAG---AAA---GCT---TAT---AGG---ACAATG---ACCCTTCTTGTAACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILSA---V-AKVPG-GV------------FWR-LLVGSVVMLGFGFAGE---T------G--M-----------M----------------------SA------QLA-FWPAMAAWGFIIWEI-----F--K-GEASQINAG--L-SNDHV-Q-K-A-Y-R-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-SAR92]_KJ929188 [I-Gamma2-SAR92] PRGD_OTU085_772e04feb3598f17b1e144ecf00d9e2f gb|KJ929188| PRGD_OTU085_772e04feb3598f17b1e144ecf00d9e2f, putative proteorhodopsin gene, partial cds. PRGD_OTU085_772e04feb3598f17b1e144ecf00d9e2f, putative proteorhodopsin gene, partial cds. KJ929188 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12) TTGCTAACTGTGCCGCTGCTAATGATTGAGTTCTACTTGATCTTGTCTGCAGTCGCCAAAGTGCCTGGCGGTGTTTTCTGGCGCTTGTTGGTCGGCTCTGTTGTTATGCTCGGCTTTGGCTTTGCTGGTGAAACAGGCATGATGTCCGCGCAGTTGGCATTCTGGCCAGCAATGGCAGCATGGGGCTTCATTATCTGGGAAATCTTCAAAGGTGAAGCAAGCCAGATCAATGCCGGTCTTTCTAACGACCATGTGCAGAAAGCTTATAGGACAATGACCCTTCTTGTGACTGTA LLTVPLLMIEFYLILSAVAKVPGGVFWRLLVGSVVMLGFGFAGETGMMSAQLAFWPAMAAWGFIIWEIFKGEASQINAGLSNDHVQKAYRTMTLLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTAACTGTGCCGCTGCTAATGATTGAGTTCTACTTGATCTTGTCTGCA---------GTC---GCCAAAGTGCCTGGC---GGTGTT------------------------------------TTCTGGCGC---TTGTTGGTCGGCTCTGTTGTTATGCTCGGCTTTGGCTTTGCTGGTGAA---------ACA------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------TCCGCG------------------CAGTTGGCA---TTCTGGCCAGCAATGGCAGCATGGGGCTTCATTATCTGGGAAATC---------------TTC------AAA---GGTGAAGCAAGCCAGATCAATGCCGGT------CTT---TCTAACGACCATGTG---CAG---AAA---GCT---TAT---AGG---ACAATG---ACCCTTCTTGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILSA---V-AKVPG-GV------------FWR-LLVGSVVMLGFGFAGE---T------G--M-----------M----------------------SA------QLA-FWPAMAAWGFIIWEI-----F--K-GEASQINAG--L-SNDHV-Q-K-A-Y-R-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-SAR92]_KJ929184 [I-Gamma2-SAR92] PRGD_OTU085_19030bd462ad71479ca43a04488aa581 gb|KJ929184| PRGD_OTU085_19030bd462ad71479ca43a04488aa581, putative proteorhodopsin gene, partial cds. PRGD_OTU085_19030bd462ad71479ca43a04488aa581, putative proteorhodopsin gene, partial cds. KJ929184 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683) TTGCTAACAGTGCCGCTGCTAATGATCGAGTTCTACTTGATCCTAACTGCAGTTGCCAAAGTGCCTGGTGGAGTTTTCTGGCGCTTGTTAGTCGGCTCTGTTGTCATGCTCGGCTTTGGTTTTGCTGGTGAAACAGGCATGATGGACGTTCAGTTGGCATTCTGGCCAGCAATGGCAGCATGGGGCTTCATTATTTGGGAAATCTTCAAAGGTGAAGCAAGCCAAATCAATGCCGGTCTCTCTAACGACCATGTGCAGAAAGCTTATAAGACAATGACCCTTCTTGTGACTGTA LLTVPLLMIEFYLILTAVAKVPGGVFWRLLVGSVVMLGFGFAGETGMMDVQLAFWPAMAAWGFIIWEIFKGEASQINAGLSNDHVQKAYKTMTLLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTAACAGTGCCGCTGCTAATGATCGAGTTCTACTTGATCCTAACTGCA---------GTT---GCCAAAGTGCCTGGT---GGAGTT------------------------------------TTCTGGCGC---TTGTTAGTCGGCTCTGTTGTCATGCTCGGCTTTGGTTTTGCTGGTGAA---------ACA------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GACGTT------------------CAGTTGGCA---TTCTGGCCAGCAATGGCAGCATGGGGCTTCATTATTTGGGAAATC---------------TTC------AAA---GGTGAAGCAAGCCAAATCAATGCCGGT------CTC---TCTAACGACCATGTG---CAG---AAA---GCT---TAT---AAG---ACAATG---ACCCTTCTTGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILTA---V-AKVPG-GV------------FWR-LLVGSVVMLGFGFAGE---T------G--M-----------M----------------------DV------QLA-FWPAMAAWGFIIWEI-----F--K-GEASQINAG--L-SNDHV-Q-K-A-Y-K-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-SAR92]_KJ929191 [I-Gamma2-SAR92] PRGD_OTU085_f4f0a46653f2f16a905fe71d3e1f5b2b gb|KJ929191| PRGD_OTU085_f4f0a46653f2f16a905fe71d3e1f5b2b, putative proteorhodopsin gene, partial cds. PRGD_OTU085_f4f0a46653f2f16a905fe71d3e1f5b2b, putative proteorhodopsin gene, partial cds. KJ929191 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; ; 67.49, -168.12), Indian Ocean (-14.48, 113.45) TTGCTAACAGTGCCGCTGCTAATGATCGAGTTCTATTTGATCCTAACTGCAGTTGCCAAAGTGCCTGGTGGAGTTTTTTGGCGCTTGTTGGTCGGCTCTGTTGTCATGCTCGGCTTTGGTTTTGCTGGTGAAACAGGCATGATGGATGTTCAGTTGGCATTCTGGCCAGCAATGGCAGCATGGGGCTTCATTATTTGGGAAATCTTCAAAGGTGAAGCAAGCCAGATCAATGCCGGTCTTTCTAACGACCATGTGCAGAAAGCTTATAAGACAATGACCCTTCTTGTGACTGTA LLTVPLLMIEFYLILTAVAKVPGGVFWRLLVGSVVMLGFGFAGETGMMDVQLAFWPAMAAWGFIIWEIFKGEASQINAGLSNDHVQKAYKTMTLLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTAACAGTGCCGCTGCTAATGATCGAGTTCTATTTGATCCTAACTGCA---------GTT---GCCAAAGTGCCTGGT---GGAGTT------------------------------------TTTTGGCGC---TTGTTGGTCGGCTCTGTTGTCATGCTCGGCTTTGGTTTTGCTGGTGAA---------ACA------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GATGTT------------------CAGTTGGCA---TTCTGGCCAGCAATGGCAGCATGGGGCTTCATTATTTGGGAAATC---------------TTC------AAA---GGTGAAGCAAGCCAGATCAATGCCGGT------CTT---TCTAACGACCATGTG---CAG---AAA---GCT---TAT---AAG---ACAATG---ACCCTTCTTGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILTA---V-AKVPG-GV------------FWR-LLVGSVVMLGFGFAGE---T------G--M-----------M----------------------DV------QLA-FWPAMAAWGFIIWEI-----F--K-GEASQINAG--L-SNDHV-Q-K-A-Y-K-TM-TLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-SAR92]_KJ929827 [I-Gamma2-SAR92] PRGD_OTU278_otuREP_5eb48ed3d2d98f6cc097442fbe3eaeaf gb|KJ929827| PRGD_OTU278_otuREP_5eb48ed3d2d98f6cc097442fbe3eaeaf, putative proteorhodopsin gene, partial cds. PRGD_OTU278_otuREP_5eb48ed3d2d98f6cc097442fbe3eaeaf, putative proteorhodopsin gene, partial cds. KJ929827 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) TTGTTAACTGTACCGTTGTTAATGATTGAATTTTACTTGATTCTATCTGCAGTATCTTCAAAAGTACCAGCAGGAATTTTTTGGCGTCTACTCTTAGGTACTGTGGTCATGTTGGGCTTCGGTTATGCTGGTGAGACAGGAATGATGGATGCTAAAATTGCATTCATTCCTTCAATGGCAGCTTGGGGTTTCATAATCTGGGAAATCTTTGGTGGCGAAGCAAGCAAGGTTAATGCTGGTCTTGCTAATCCTCACGTCCAAAAAGCTTATAAGACAATGACTATACTAGTTACTGTT LLTVPLLMIEFYLILSAVSSKVPAGIFWRLLLGTVVMLGFGYAGETGMMDAKIAFIPSMAAWGFIIWEIFGGEASKVNAGLANPHVQKAYKTMTILVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTAACTGTACCGTTGTTAATGATTGAATTTTACTTGATTCTATCTGCA---------GTATCTTCAAAAGTACCAGCA---GGAATT------------------------------------TTTTGGCGT---CTACTCTTAGGTACTGTGGTCATGTTGGGCTTCGGTTATGCTGGTGAG---------ACA------------------GGA------ATG---------------------------------ATG------------------------------------------------------------------GATGCT------------------AAAATTGCA---TTCATTCCTTCAATGGCAGCTTGGGGTTTCATAATCTGGGAAATC---------------TTT------GGT---GGCGAAGCAAGCAAGGTTAATGCTGGT------CTT---GCTAATCCTCACGTC---CAA---AAA---GCT---TAT---AAG---ACAATG---ACTATACTAGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILSA---VSSKVPA-GI------------FWR-LLLGTVVMLGFGYAGE---T------G--M-----------M----------------------DA------KIA-FIPSMAAWGFIIWEI-----F--G-GEASKVNAG--L-ANPHV-Q-K-A-Y-K-TM-TILVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-SAR92]_KJ929730 [I-Gamma2-SAR92] PRGD_OTU217_otuREP_2d59aa588e0822e33cc9fa65a242f10a gb|KJ929730| PRGD_OTU217_otuREP_2d59aa588e0822e33cc9fa65a242f10a, putative proteorhodopsin gene, partial cds. PRGD_OTU217_otuREP_2d59aa588e0822e33cc9fa65a242f10a, putative proteorhodopsin gene, partial cds. KJ929730 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683) CTATTAACTGTACCGTTATTAATGATTGAGTTCTATTTGATTCTTTCTGCAGTAGCAAAAGTACCTGCCGGTGTTTTTTGGCGTTTATTAGGTGGTAGCGTTGTAATGCTTGGTTTCGGTTATGCTGGTGAAGTTGGATTGATGGACGCTAAAGTAGCTTTCGTCCCATCAATGGCGGCATGGTTTTTCATCATTTGGGAAATCTTCCGTGGTGAAGCAAGTCGAATCAATGCTGGATTGTCTAATGTTAACGTCCAAAAAGCCTATAAATACATGTTGATCTTAGTAACAGTC LLTVPLLMIEFYLILSAVAKVPAGVFWRLLGGSVVMLGFGYAGEVGLMDAKVAFVPSMAAWFFIIWEIFRGEASRINAGLSNVNVQKAYKYMLILVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACTGTACCGTTATTAATGATTGAGTTCTATTTGATTCTTTCTGCA---------GTA---GCAAAAGTACCTGCC---GGTGTT------------------------------------TTTTGGCGT---TTATTAGGTGGTAGCGTTGTAATGCTTGGTTTCGGTTATGCTGGTGAA---------GTT------------------GGA------TTG---------------------------------ATG------------------------------------------------------------------GACGCT------------------AAAGTAGCT---TTCGTCCCATCAATGGCGGCATGGTTTTTCATCATTTGGGAAATC---------------TTC------CGT---GGTGAAGCAAGTCGAATCAATGCTGGA------TTG---TCTAATGTTAACGTC---CAA---AAA---GCC---TAT---AAA---TACATG---TTGATCTTAGTAACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILSA---V-AKVPA-GV------------FWR-LLGGSVVMLGFGYAGE---V------G--L-----------M----------------------DA------KVA-FVPSMAAWFFIIWEI-----F--R-GEASRINAG--L-SNVNV-Q-K-A-Y-K-YM-LILVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-SAR92]_KJ929731 [I-Gamma2-SAR92] PRGD_OTU217_67719499bfc8fc498d27c18eb9bde149 gb|KJ929731| PRGD_OTU217_67719499bfc8fc498d27c18eb9bde149, putative proteorhodopsin gene, partial cds. PRGD_OTU217_67719499bfc8fc498d27c18eb9bde149, putative proteorhodopsin gene, partial cds. KJ929731 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781) CTATTAACTGTACCGTTATTAATGATTGAGTTCTATTTGATTCTTTCTGCAGTAGCAAAAGTACCTGCCGGTGTTTTCTGGCGTTTATTAGGTGGTAGCGTTGTAATGCTTGGTTTCGGTTATGCTGGTGAAGTTGGATTGATGAACGCTAAAGTAGCTTTCGTCCCATCAATGGCAGCATGGTTTTTCATCATTTGGGAAATCTTCCGTGGTGAAGCAAGTCGAATCAATGCTGGATTGTCTAATGTTAACGTCCAAAAAGCCTATAAATACATGTTGATCTTAGTAACAGTC LLTVPLLMIEFYLILSAVAKVPAGVFWRLLGGSVVMLGFGYAGEVGLMNAKVAFVPSMAAWFFIIWEIFRGEASRINAGLSNVNVQKAYKYMLILVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACTGTACCGTTATTAATGATTGAGTTCTATTTGATTCTTTCTGCA---------GTA---GCAAAAGTACCTGCC---GGTGTT------------------------------------TTCTGGCGT---TTATTAGGTGGTAGCGTTGTAATGCTTGGTTTCGGTTATGCTGGTGAA---------GTT------------------GGA------TTG---------------------------------ATG------------------------------------------------------------------AACGCT------------------AAAGTAGCT---TTCGTCCCATCAATGGCAGCATGGTTTTTCATCATTTGGGAAATC---------------TTC------CGT---GGTGAAGCAAGTCGAATCAATGCTGGA------TTG---TCTAATGTTAACGTC---CAA---AAA---GCC---TAT---AAA---TACATG---TTGATCTTAGTAACAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILSA---V-AKVPA-GV------------FWR-LLGGSVVMLGFGYAGE---V------G--L-----------M----------------------NA------KVA-FVPSMAAWFFIIWEI-----F--R-GEASRINAG--L-SNVNV-Q-K-A-Y-K-YM-LILVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-SAR92]_KJ929846 [I-Gamma2-SAR92] PRGD_OTU297_otuREP_5a90b51d137574b0cbd865e4a95d7a56 gb|KJ929846| PRGD_OTU297_otuREP_5a90b51d137574b0cbd865e4a95d7a56, putative proteorhodopsin gene, partial cds. PRGD_OTU297_otuREP_5a90b51d137574b0cbd865e4a95d7a56, putative proteorhodopsin gene, partial cds. KJ929846 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185) CTCCTAACTGTGCCGCTGTTGATGATCGAATTCTACTTGGTTCTGTCTGCAGTAACTAAAGTGCCTTCTGGTGTCTTCACGCGTCTCCTTGTTGGCTCTGTCGCCATGCTAGTGTTCGGTTATATGGGCGAAACAGGCATGATGAACGTGACGTTGGCGTTCGTTCTTGCAATGTTAAGTTGGGGCGTTATTCTCTGGGAAATCTTCAAAGGTGAAGCAAGCCAGATCAATGCCGGGCTTTCAAATGCAAACGTTCAAAAAGCATATAAGTGGATGCTTATCTGCGTTTCAATT LLTVPLLMIEFYLVLSAVTKVPSGVFTRLLVGSVAMLVFGYMGETGMMNVTLAFVLAMLSWGVILWEIFKGEASQINAGLSNANVQKAYKWMLICVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTAACTGTGCCGCTGTTGATGATCGAATTCTACTTGGTTCTGTCTGCA---------GTA---ACTAAAGTGCCTTCT---GGTGTC------------------------------------TTCACGCGT---CTCCTTGTTGGCTCTGTCGCCATGCTAGTGTTCGGTTATATGGGCGAA---------ACA------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------AACGTG------------------ACGTTGGCG---TTCGTTCTTGCAATGTTAAGTTGGGGCGTTATTCTCTGGGAAATC---------------TTC------AAA---GGTGAAGCAAGCCAGATCAATGCCGGG------CTT---TCAAATGCAAACGTT---CAA---AAA---GCA---TAT---AAG---TGGATG---CTTATCTGCGTTTCAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLVLSA---V-TKVPS-GV------------FTR-LLVGSVAMLVFGYMGE---T------G--M-----------M----------------------NV------TLA-FVLAMLSWGVILWEI-----F--K-GEASQINAG--L-SNANV-Q-K-A-Y-K-WM-LICVSI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-SAR92]_KJ929897 [I-Gamma2-SAR92] PRGD_OTU348_otuREP_7b9b4557f8c0c95dc364111dbd13ef98 gb|KJ929897| PRGD_OTU348_otuREP_7b9b4557f8c0c95dc364111dbd13ef98, putative proteorhodopsin gene, partial cds. PRGD_OTU348_otuREP_7b9b4557f8c0c95dc364111dbd13ef98, putative proteorhodopsin gene, partial cds. KJ929897 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12) CTATTAACAGTGCCATTATTGATGATTGAGTTCTACTTGGTTCTATCTGCAGTAACTAAAGTGCCTGCTGGTGTCTTCTGGCGTTTACTGATTGGCTCGATCGTTATGCTTGGCTTCGGCTATGCTGGTGAGACAGGCATGATGGGTACAACAAGTGCCTTTGTTCTTGCAATGGCTGGTTGGGGATTCATCATTTGGGAAATCTTCAAAGGTGAAGCAAGCCAGATCAATGCTGGACTTTCAAACGCTAACGTTCAGGGCGCATACAAGGCAATGCTTATTTGCGTAACTATC LLTVPLLMIEFYLVLSAVTKVPAGVFWRLLIGSIVMLGFGYAGETGMMGTTSAFVLAMAGWGFIIWEIFKGEASQINAGLSNANVQGAYKAMLICVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACAGTGCCATTATTGATGATTGAGTTCTACTTGGTTCTATCTGCA---------GTA---ACTAAAGTGCCTGCT---GGTGTC------------------------------------TTCTGGCGT---TTACTGATTGGCTCGATCGTTATGCTTGGCTTCGGCTATGCTGGTGAG---------ACA------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GGTACA------------------ACAAGTGCC---TTTGTTCTTGCAATGGCTGGTTGGGGATTCATCATTTGGGAAATC---------------TTC------AAA---GGTGAAGCAAGCCAGATCAATGCTGGA------CTT---TCAAACGCTAACGTT---CAG---GGC---GCA---TAC---AAG---GCAATG---CTTATTTGCGTAACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLVLSA---V-TKVPA-GV------------FWR-LLIGSIVMLGFGYAGE---T------G--M-----------M----------------------GT------TSA-FVLAMAGWGFIIWEI-----F--K-GEASQINAG--L-SNANV-Q-G-A-Y-K-AM-LICVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-SAR92]_KJ929807 [I-Gamma2-SAR92] PRGD_OTU258_otuREP_ee150a7c3bd20d99bc9b74995d5216d8 gb|KJ929807| PRGD_OTU258_otuREP_ee150a7c3bd20d99bc9b74995d5216d8, putative proteorhodopsin gene, partial cds. PRGD_OTU258_otuREP_ee150a7c3bd20d99bc9b74995d5216d8, putative proteorhodopsin gene, partial cds. KJ929807 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/OMG SAR92 HTCC2207-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 OMG SAR92 HTCC2207-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCCTAACAGTGCCTCTGTTGATGATTGAGTTCTACTTGATTCTGTCTGCAGTAACTAAAGTACCTGCTGGTGTTTTCTGGCGCTTACTGATTGGTTCTGTTGTGATGCTTGGCTTCGGTTACGCCGGTGAGACTGACATGATGAGTGCCTCAGTAGCCTTCTGGCCTGCAATGTTAGGGTGGGGATTCATTGTTTATGAGATCTTCAAAGGCGAGGCTAGCCGAATCAATGCAGGATTGGCTAATGCTAATGTCCAGAAAGCATACAAAACTATGCTACTTATGGTAACCGTT LLTVPLLMIEFYLILSAVTKVPAGVFWRLLIGSVVMLGFGYAGETDMMSASVAFWPAMLGWGFIVYEIFKGEASRINAGLANANVQKAYKTMLLMVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTAACAGTGCCTCTGTTGATGATTGAGTTCTACTTGATTCTGTCTGCA---------GTA---ACTAAAGTACCTGCT---GGTGTT------------------------------------TTCTGGCGC---TTACTGATTGGTTCTGTTGTGATGCTTGGCTTCGGTTACGCCGGTGAG---------ACT------------------GAC------ATG---------------------------------ATG------------------------------------------------------------------AGTGCC------------------TCAGTAGCC---TTCTGGCCTGCAATGTTAGGGTGGGGATTCATTGTTTATGAGATC---------------TTC------AAA---GGCGAGGCTAGCCGAATCAATGCAGGA------TTG---GCTAATGCTAATGTC---CAG---AAA---GCA---TAC---AAA---ACTATG---CTACTTATGGTAACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYLILSA---V-TKVPA-GV------------FWR-LLIGSVVMLGFGYAGE---T------D--M-----------M----------------------SA------SVA-FWPAMLGWGFIVYEI-----F--K-GEASRINAG--L-ANANV-Q-K-A-Y-K-TM-LLMVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-c]_KJ928778 [I-Gamma2-c] PRGD_OTU052_63ae05619f0387a516ff904c52bb5a8b gb|KJ928778| PRGD_OTU052_63ae05619f0387a516ff904c52bb5a8b, putative proteorhodopsin gene, partial cds. PRGD_OTU052_63ae05619f0387a516ff904c52bb5a8b, putative proteorhodopsin gene, partial cds. KJ928778 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/C subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Bering strait marine 67.49 -168.12 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097), Arctic Ocean-Pacific side (67.49, -168.12) TTACTAACAGTTCCACTGTTGATCATAGAATTCTACCTGATCCTATCTGCGATCACTAAAACGCCCGTAGGTGTGTTTTGGCGTTTGCTGATCGGTTCTCTCGTCATGCTGGGCTTTGGCTTTGCCGGCGAAGCGGGCGCGATGGACGTGAGTTTAGCATTTTGGATTGCAATGGCGGCTTGGGTCTTCATTATGTGGGAGATCTTTTTCGGCCAAGCAAGCAAGATCAACGCTGGCAGCGGAAACGCTAATGTGCAGAAAGCCTATAAGGCGATGGCACTGTTGGTGACGATA LLTVPLLIIEFYLILSAITKTPVGVFWRLLIGSLVMLGFGFAGEAGAMDVSLAFWIAMAAWVFIMWEIFFGQASKINAGSGNANVQKAYKAMALLVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTAACAGTTCCACTGTTGATCATAGAATTCTACCTGATCCTATCTGCG---------ATC---ACTAAAACGCCCGTA---GGTGTG------------------------------------TTTTGGCGT---TTGCTGATCGGTTCTCTCGTCATGCTGGGCTTTGGCTTTGCCGGCGAA---------GCG------------------GGC------GCG---------------------------------ATG------------------------------------------------------------------GACGTG------------------AGTTTAGCA---TTTTGGATTGCAATGGCGGCTTGGGTCTTCATTATGTGGGAGATC---------------TTT------TTC---GGCCAAGCAAGCAAGATCAACGCTGGC------AGC---GGAAACGCTAATGTG---CAG---AAA---GCC---TAT---AAG---GCGATG---GCACTGTTGGTGACGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILSA---I-TKTPV-GV------------FWR-LLIGSLVMLGFGFAGE---A------G--A-----------M----------------------DV------SLA-FWIAMAAWVFIMWEI-----F--F-GQASKINAG--S-GNANV-Q-K-A-Y-K-AM-ALLVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-c]_KJ928772 [I-Gamma2-c] PRGD_OTU052_otuREP_e73ecc699d89941b58e9c17c75f4b0c2 gb|KJ928772| PRGD_OTU052_otuREP_e73ecc699d89941b58e9c17c75f4b0c2, putative proteorhodopsin gene, partial cds. PRGD_OTU052_otuREP_e73ecc699d89941b58e9c17c75f4b0c2, putative proteorhodopsin gene, partial cds. KJ928772 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/C subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-14.48, 113.45) TTACTAACGGTTCCACTGTTGATCATAGAATTCTACCTGATCCTGTCTGCGATCACTAAAACGCCCGTAGGTGTGTTTTGGCGTTTGCTGATTGGTTCTCTCGTCATGCTGGGCTTTGGCTTTGCCGGCGAAGCGGGCGCGATGGACGTGAGTTTAGCGTTTTGGATTGCAATGGCGGCTTGGGTCTTCATTATGTGGGAGATCTTTTTCGGCCAAGCAAGCAAGATCAACGCTGGCAGCGGAAACGCCAATGTGCAGAAAGCCTATAAGGCGATGGCACTGCTGGTGACGATA LLTVPLLIIEFYLILSAITKTPVGVFWRLLIGSLVMLGFGFAGEAGAMDVSLAFWIAMAAWVFIMWEIFFGQASKINAGSGNANVQKAYKAMALLVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTAACGGTTCCACTGTTGATCATAGAATTCTACCTGATCCTGTCTGCG---------ATC---ACTAAAACGCCCGTA---GGTGTG------------------------------------TTTTGGCGT---TTGCTGATTGGTTCTCTCGTCATGCTGGGCTTTGGCTTTGCCGGCGAA---------GCG------------------GGC------GCG---------------------------------ATG------------------------------------------------------------------GACGTG------------------AGTTTAGCG---TTTTGGATTGCAATGGCGGCTTGGGTCTTCATTATGTGGGAGATC---------------TTT------TTC---GGCCAAGCAAGCAAGATCAACGCTGGC------AGC---GGAAACGCCAATGTG---CAG---AAA---GCC---TAT---AAG---GCGATG---GCACTGCTGGTGACGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILSA---I-TKTPV-GV------------FWR-LLIGSLVMLGFGFAGE---A------G--A-----------M----------------------DV------SLA-FWIAMAAWVFIMWEI-----F--F-GQASKINAG--S-GNANV-Q-K-A-Y-K-AM-ALLVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-c]_KJ928785 [I-Gamma2-c] PRGD_OTU052_ecea7f5cbd239e1a166aeaa4b320e085 gb|KJ928785| PRGD_OTU052_ecea7f5cbd239e1a166aeaa4b320e085, putative proteorhodopsin gene, partial cds. PRGD_OTU052_ecea7f5cbd239e1a166aeaa4b320e085, putative proteorhodopsin gene, partial cds. KJ928785 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/C subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (72.0542, -130.8781; ; 67.49, -168.12) TTACTGACGGTTCCGCTGTTGATCATAGAATTCTACCTCATTCTGTCTGCGATCACTAAAACGCCCGTAGGTGTGTTCTGGCGTTTGCTGATCGGTTCTCTCGTCATGCTGGGCTTTGGATTTGCCGGCGAAGCGGGCGCGATGGACGTGAGTTTAGCGTTTTGGATTGCAATGGCGGCTTGGGTCTTCATCATGTGGGAGATCTTTTTCGGCCAAGCAAGCAAGATCAACGCTGGCAGCGGAAACGCTAATGTGCAGAAAGCCTATAAGGCGATGGCACTGCTGGTGACGATA LLTVPLLIIEFYLILSAITKTPVGVFWRLLIGSLVMLGFGFAGEAGAMDVSLAFWIAMAAWVFIMWEIFFGQASKINAGSGNANVQKAYKAMALLVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTGACGGTTCCGCTGTTGATCATAGAATTCTACCTCATTCTGTCTGCG---------ATC---ACTAAAACGCCCGTA---GGTGTG------------------------------------TTCTGGCGT---TTGCTGATCGGTTCTCTCGTCATGCTGGGCTTTGGATTTGCCGGCGAA---------GCG------------------GGC------GCG---------------------------------ATG------------------------------------------------------------------GACGTG------------------AGTTTAGCG---TTTTGGATTGCAATGGCGGCTTGGGTCTTCATCATGTGGGAGATC---------------TTT------TTC---GGCCAAGCAAGCAAGATCAACGCTGGC------AGC---GGAAACGCTAATGTG---CAG---AAA---GCC---TAT---AAG---GCGATG---GCACTGCTGGTGACGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILSA---I-TKTPV-GV------------FWR-LLIGSLVMLGFGFAGE---A------G--A-----------M----------------------DV------SLA-FWIAMAAWVFIMWEI-----F--F-GQASKINAG--S-GNANV-Q-K-A-Y-K-AM-ALLVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-c]_KJ928782 [I-Gamma2-c] PRGD_OTU052_894004bc9a7c1249396081b4176dbbe9 gb|KJ928782| PRGD_OTU052_894004bc9a7c1249396081b4176dbbe9, putative proteorhodopsin gene, partial cds. PRGD_OTU052_894004bc9a7c1249396081b4176dbbe9, putative proteorhodopsin gene, partial cds. KJ928782 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/C subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; ; 67.49, -168.12) TTACTAACGGTTCCACTGTTGATCATAGAATTCTACCTGATTCTGTCTGCGATCACTAAAACGCCGGTCGGTGTGTTTTGGCGTTTGCTGATCGGTTCTCTCGTCATGCTGGGCTTTGGATTTGCCGGCGAAGCGGGCGCGATGGACGTGAGTTTGGCGTTTTGGATTGCAATGGCGGCTTGGGTCTTCATTATGTGGGAGATCTTTTTCGGCCAAGCAAGCAAGATCAACGCTGGCAGCGGAAACGCCAATGTGCAGAAAGCCTATAAGGCGATGGCACTGCTGGTGACGATA LLTVPLLIIEFYLILSAITKTPVGVFWRLLIGSLVMLGFGFAGEAGAMDVSLAFWIAMAAWVFIMWEIFFGQASKINAGSGNANVQKAYKAMALLVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTAACGGTTCCACTGTTGATCATAGAATTCTACCTGATTCTGTCTGCG---------ATC---ACTAAAACGCCGGTC---GGTGTG------------------------------------TTTTGGCGT---TTGCTGATCGGTTCTCTCGTCATGCTGGGCTTTGGATTTGCCGGCGAA---------GCG------------------GGC------GCG---------------------------------ATG------------------------------------------------------------------GACGTG------------------AGTTTGGCG---TTTTGGATTGCAATGGCGGCTTGGGTCTTCATTATGTGGGAGATC---------------TTT------TTC---GGCCAAGCAAGCAAGATCAACGCTGGC------AGC---GGAAACGCCAATGTG---CAG---AAA---GCC---TAT---AAG---GCGATG---GCACTGCTGGTGACGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILSA---I-TKTPV-GV------------FWR-LLIGSLVMLGFGFAGE---A------G--A-----------M----------------------DV------SLA-FWIAMAAWVFIMWEI-----F--F-GQASKINAG--S-GNANV-Q-K-A-Y-K-AM-ALLVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-c]_KJ928776 [I-Gamma2-c] PRGD_OTU052_2e58cfe6f82cf03280dec897b602c480 gb|KJ928776| PRGD_OTU052_2e58cfe6f82cf03280dec897b602c480, putative proteorhodopsin gene, partial cds. PRGD_OTU052_2e58cfe6f82cf03280dec897b602c480, putative proteorhodopsin gene, partial cds. KJ928776 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/C subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Bering strait marine 67.49 -168.12 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12) TTACTAACGGTTCCACTGTTGATCATAGAATTCTACCTGATTCTGTCTGCGATCACTAAAACGCCCGTCGGTGTGTTTTGGCGTTTGCTGATCGGTTCTCTCGTCATGCTGGGCTTTGGATTTGCCGGCGAAGCGGGCGCGATGGACGTGAGTTTGGCGTTTTGGATTGCAATGGCGGCTTGGGTCTTCATTATGTGGGAAATCTTTTTCGGTCAAGCGAGCAAGATCAACGCTGGCAGCGGAAACGCCAATGTGCAGAAAGCCTATAAGGCGATGGCATTGCTGGTGACGATA LLTVPLLIIEFYLILSAITKTPVGVFWRLLIGSLVMLGFGFAGEAGAMDVSLAFWIAMAAWVFIMWEIFFGQASKINAGSGNANVQKAYKAMALLVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTAACGGTTCCACTGTTGATCATAGAATTCTACCTGATTCTGTCTGCG---------ATC---ACTAAAACGCCCGTC---GGTGTG------------------------------------TTTTGGCGT---TTGCTGATCGGTTCTCTCGTCATGCTGGGCTTTGGATTTGCCGGCGAA---------GCG------------------GGC------GCG---------------------------------ATG------------------------------------------------------------------GACGTG------------------AGTTTGGCG---TTTTGGATTGCAATGGCGGCTTGGGTCTTCATTATGTGGGAAATC---------------TTT------TTC---GGTCAAGCGAGCAAGATCAACGCTGGC------AGC---GGAAACGCCAATGTG---CAG---AAA---GCC---TAT---AAG---GCGATG---GCATTGCTGGTGACGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILSA---I-TKTPV-GV------------FWR-LLIGSLVMLGFGFAGE---A------G--A-----------M----------------------DV------SLA-FWIAMAAWVFIMWEI-----F--F-GQASKINAG--S-GNANV-Q-K-A-Y-K-AM-ALLVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-c]_KJ928781 [I-Gamma2-c] PRGD_OTU052_82b677bdc1fb105a9fc1241239b71ac1 gb|KJ928781| PRGD_OTU052_82b677bdc1fb105a9fc1241239b71ac1, putative proteorhodopsin gene, partial cds. PRGD_OTU052_82b677bdc1fb105a9fc1241239b71ac1, putative proteorhodopsin gene, partial cds. KJ928781 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/C subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Bering strait marine 67.49 -168.12 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683) TTGCTAACGGTTCCACTGCTGATCATAGAATTTTACCTGATTCTGTCTGCGATCACTAAAACGCCTGTCGGTGTGTTTTGGCGTTTGCTGATCGGTTCTCTCGTCATGCTGGGCTTTGGATTTGCCGGCGAAGCGGGCGCGATGGACGTGAGTTTGGCGTTTTGGATTGCAATGGCGGCTTGGGTCTTCATTATGTGGGAGATCTTTTTCGGTCAAGCGAGCAAGATCAACGCTGGCAGCGGAAACGCCAATGTGCAGAAGGCCTATAAGGCGATGGCACTGCTGGTGACGATA LLTVPLLIIEFYLILSAITKTPVGVFWRLLIGSLVMLGFGFAGEAGAMDVSLAFWIAMAAWVFIMWEIFFGQASKINAGSGNANVQKAYKAMALLVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTAACGGTTCCACTGCTGATCATAGAATTTTACCTGATTCTGTCTGCG---------ATC---ACTAAAACGCCTGTC---GGTGTG------------------------------------TTTTGGCGT---TTGCTGATCGGTTCTCTCGTCATGCTGGGCTTTGGATTTGCCGGCGAA---------GCG------------------GGC------GCG---------------------------------ATG------------------------------------------------------------------GACGTG------------------AGTTTGGCG---TTTTGGATTGCAATGGCGGCTTGGGTCTTCATTATGTGGGAGATC---------------TTT------TTC---GGTCAAGCGAGCAAGATCAACGCTGGC------AGC---GGAAACGCCAATGTG---CAG---AAG---GCC---TAT---AAG---GCGATG---GCACTGCTGGTGACGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILSA---I-TKTPV-GV------------FWR-LLIGSLVMLGFGFAGE---A------G--A-----------M----------------------DV------SLA-FWIAMAAWVFIMWEI-----F--F-GQASKINAG--S-GNANV-Q-K-A-Y-K-AM-ALLVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-c]_KJ928788 [I-Gamma2-c] PRGD_OTU052_f24cfe16183923dabc60c0b076708b14 gb|KJ928788| PRGD_OTU052_f24cfe16183923dabc60c0b076708b14, putative proteorhodopsin gene, partial cds. PRGD_OTU052_f24cfe16183923dabc60c0b076708b14, putative proteorhodopsin gene, partial cds. KJ928788 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/C subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) TTATTAACGGTTCCACTGTTGATCATAGAATTTTACCTGATTCTGTCTGCGATCACTAAAACGCCCGTCGGTGTGTTTTGGCGTTTGCTGATCGGTTCTCTCGTCATGCTGGGCTTTGGATTTGCCGGCGAAGCGGGCGCGATGGACGTGAGTTTGGCGTTTTGGATTGCAATGGCGGCTTGGGTCTTCATTATGTGGGAGATCTTTTTCGGTCAAGCGAGCAAGATCAACGCTGGCAGCGGAAACGCCAATGTGCAGAAGGCCTATAAGGCGATGGCATTGCTGGTGACGATA LLTVPLLIIEFYLILSAITKTPVGVFWRLLIGSLVMLGFGFAGEAGAMDVSLAFWIAMAAWVFIMWEIFFGQASKINAGSGNANVQKAYKAMALLVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACGGTTCCACTGTTGATCATAGAATTTTACCTGATTCTGTCTGCG---------ATC---ACTAAAACGCCCGTC---GGTGTG------------------------------------TTTTGGCGT---TTGCTGATCGGTTCTCTCGTCATGCTGGGCTTTGGATTTGCCGGCGAA---------GCG------------------GGC------GCG---------------------------------ATG------------------------------------------------------------------GACGTG------------------AGTTTGGCG---TTTTGGATTGCAATGGCGGCTTGGGTCTTCATTATGTGGGAGATC---------------TTT------TTC---GGTCAAGCGAGCAAGATCAACGCTGGC------AGC---GGAAACGCCAATGTG---CAG---AAG---GCC---TAT---AAG---GCGATG---GCATTGCTGGTGACGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILSA---I-TKTPV-GV------------FWR-LLIGSLVMLGFGFAGE---A------G--A-----------M----------------------DV------SLA-FWIAMAAWVFIMWEI-----F--F-GQASKINAG--S-GNANV-Q-K-A-Y-K-AM-ALLVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-c]_KJ928780 [I-Gamma2-c] PRGD_OTU052_7e64bbb19740422b78de9ac4942b4cd0 gb|KJ928780| PRGD_OTU052_7e64bbb19740422b78de9ac4942b4cd0, putative proteorhodopsin gene, partial cds. PRGD_OTU052_7e64bbb19740422b78de9ac4942b4cd0, putative proteorhodopsin gene, partial cds. KJ928780 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/C subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Bering strait marine 67.49 -168.12 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTACTAACGGTTCCACTGTTGATTATAGAATTTTACCTGATTCTGTCTGCGATCACTAAAACGCCCGTAGGTGTGTTTTGGCGTTTGCTGATCGGTTCTCTCGTCATGCTGGGCTTTGGATTTGCCGGCGAAGCGGGTGCGATGGACGTGAGTTTGGCGTTTTGGATTGCAATGGCGGCTTGGGTCTTCATTATGTGGGAGATCTTTTTTGGTCAAGCGAGCAAGATCAACGCTGGCAGCGGAAACGCCAATGTGCAGAAAGCCTATAAGGCGATGGCATTGCTGGTGACGATA LLTVPLLIIEFYLILSAITKTPVGVFWRLLIGSLVMLGFGFAGEAGAMDVSLAFWIAMAAWVFIMWEIFFGQASKINAGSGNANVQKAYKAMALLVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTAACGGTTCCACTGTTGATTATAGAATTTTACCTGATTCTGTCTGCG---------ATC---ACTAAAACGCCCGTA---GGTGTG------------------------------------TTTTGGCGT---TTGCTGATCGGTTCTCTCGTCATGCTGGGCTTTGGATTTGCCGGCGAA---------GCG------------------GGT------GCG---------------------------------ATG------------------------------------------------------------------GACGTG------------------AGTTTGGCG---TTTTGGATTGCAATGGCGGCTTGGGTCTTCATTATGTGGGAGATC---------------TTT------TTT---GGTCAAGCGAGCAAGATCAACGCTGGC------AGC---GGAAACGCCAATGTG---CAG---AAA---GCC---TAT---AAG---GCGATG---GCATTGCTGGTGACGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILSA---I-TKTPV-GV------------FWR-LLIGSLVMLGFGFAGE---A------G--A-----------M----------------------DV------SLA-FWIAMAAWVFIMWEI-----F--F-GQASKINAG--S-GNANV-Q-K-A-Y-K-AM-ALLVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-c]_KJ928779 [I-Gamma2-c] PRGD_OTU052_65ca816c296180cee8a9ff48c6f97f77 gb|KJ928779| PRGD_OTU052_65ca816c296180cee8a9ff48c6f97f77, putative proteorhodopsin gene, partial cds. PRGD_OTU052_65ca816c296180cee8a9ff48c6f97f77, putative proteorhodopsin gene, partial cds. KJ928779 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/C subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) TTACTAACGGTTCCACTGTTGATCATAGAATTCTACCTGATTCTGTCTGCGATCACTAAAACGCCGGTCGGTGTGTTTTGGCGTTTGCTGATCGGTTCTCTCGTCATGCTGGGCTTTGGATTTGCCGGCGAAGCGGGCGCGATGGACGTGAGTTTGGCGTTTTGGATTGCAATGGCGGCTTGGGTCTTCATTATGTGGGAGATCTTTTTCGGTCAAGCGAGCAAGATCAACGCTGGCAGCGGAAACGCCAATGTGCAGAAAGCCTATAAGGCGATGGCATTGCTGGTGACGATA LLTVPLLIIEFYLILSAITKTPVGVFWRLLIGSLVMLGFGFAGEAGAMDVSLAFWIAMAAWVFIMWEIFFGQASKINAGSGNANVQKAYKAMALLVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTAACGGTTCCACTGTTGATCATAGAATTCTACCTGATTCTGTCTGCG---------ATC---ACTAAAACGCCGGTC---GGTGTG------------------------------------TTTTGGCGT---TTGCTGATCGGTTCTCTCGTCATGCTGGGCTTTGGATTTGCCGGCGAA---------GCG------------------GGC------GCG---------------------------------ATG------------------------------------------------------------------GACGTG------------------AGTTTGGCG---TTTTGGATTGCAATGGCGGCTTGGGTCTTCATTATGTGGGAGATC---------------TTT------TTC---GGTCAAGCGAGCAAGATCAACGCTGGC------AGC---GGAAACGCCAATGTG---CAG---AAA---GCC---TAT---AAG---GCGATG---GCATTGCTGGTGACGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILSA---I-TKTPV-GV------------FWR-LLIGSLVMLGFGFAGE---A------G--A-----------M----------------------DV------SLA-FWIAMAAWVFIMWEI-----F--F-GQASKINAG--S-GNANV-Q-K-A-Y-K-AM-ALLVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-c]_KJ928774 [I-Gamma2-c] PRGD_OTU052_0bd0bc17b9e4d44ecb546e29b4c3c7fd gb|KJ928774| PRGD_OTU052_0bd0bc17b9e4d44ecb546e29b4c3c7fd, putative proteorhodopsin gene, partial cds. PRGD_OTU052_0bd0bc17b9e4d44ecb546e29b4c3c7fd, putative proteorhodopsin gene, partial cds. KJ928774 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/C subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185) TTACTCACGGTTCCACTACTCATCATAGAGTTTTACTTGATTCTTTCTGCAATCACTAAAACGCCCGTAGGTGTGTTCTGGCGTTTGCTGATCGGGTCTCTCGTAATGCTGGGCTTTGGATTTGCCGGCGAAGCGGGTGTGATGGACGTGAGTTTGGCGTTTTGGATTGCAATGGCGGCTTGGGTCTTCATTATGTGGGAGATCTTTTTCGGTCAAGCGAGCAAGATCAACGCTGCCAGCGGAAACGCCAATGTGCAGAAAGCCTATAAGGCGATGGCATTGCTGGTGACGATA LLTVPLLIIEFYLILSAITKTPVGVFWRLLIGSLVMLGFGFAGEAGVMDVSLAFWIAMAAWVFIMWEIFFGQASKINAASGNANVQKAYKAMALLVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTCACGGTTCCACTACTCATCATAGAGTTTTACTTGATTCTTTCTGCA---------ATC---ACTAAAACGCCCGTA---GGTGTG------------------------------------TTCTGGCGT---TTGCTGATCGGGTCTCTCGTAATGCTGGGCTTTGGATTTGCCGGCGAA---------GCG------------------GGT------GTG---------------------------------ATG------------------------------------------------------------------GACGTG------------------AGTTTGGCG---TTTTGGATTGCAATGGCGGCTTGGGTCTTCATTATGTGGGAGATC---------------TTT------TTC---GGTCAAGCGAGCAAGATCAACGCTGCC------AGC---GGAAACGCCAATGTG---CAG---AAA---GCC---TAT---AAG---GCGATG---GCATTGCTGGTGACGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILSA---I-TKTPV-GV------------FWR-LLIGSLVMLGFGFAGE---A------G--V-----------M----------------------DV------SLA-FWIAMAAWVFIMWEI-----F--F-GQASKINAA--S-GNANV-Q-K-A-Y-K-AM-ALLVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-c]_KJ928787 [I-Gamma2-c] PRGD_OTU052_ef6e1b78b05c3cc961c3c0bcc95e8d06 gb|KJ928787| PRGD_OTU052_ef6e1b78b05c3cc961c3c0bcc95e8d06, putative proteorhodopsin gene, partial cds. PRGD_OTU052_ef6e1b78b05c3cc961c3c0bcc95e8d06, putative proteorhodopsin gene, partial cds. KJ928787 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/C subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (33.935, 18.508) TTACTCACGGTTCCACTACTCATCATAGAGTTTTACTTGATTCTTTCTGCAATCACTAAAACGCCCGTAGGTGTGTTCTGGCGTTTGCTGATCGGGTCTCTCGTAATGCTGGGCTTTGGATTTGCCGGCGAAGCGGGTGTGATGGACGTGAGTTTGGCGTTTTGGATTGCAATGGCGGCTTGGGTCTTCATTATGTGGGAGATCTTTTTTGGTCAAGCGAGCAAGATCAACGCTGGCAGCGGAAACGTCAATGTGCAGAAAGCTTATAAGGCGATGGCACTACTGGTGACGATA LLTVPLLIIEFYLILSAITKTPVGVFWRLLIGSLVMLGFGFAGEAGVMDVSLAFWIAMAAWVFIMWEIFFGQASKINAGSGNVNVQKAYKAMALLVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTCACGGTTCCACTACTCATCATAGAGTTTTACTTGATTCTTTCTGCA---------ATC---ACTAAAACGCCCGTA---GGTGTG------------------------------------TTCTGGCGT---TTGCTGATCGGGTCTCTCGTAATGCTGGGCTTTGGATTTGCCGGCGAA---------GCG------------------GGT------GTG---------------------------------ATG------------------------------------------------------------------GACGTG------------------AGTTTGGCG---TTTTGGATTGCAATGGCGGCTTGGGTCTTCATTATGTGGGAGATC---------------TTT------TTT---GGTCAAGCGAGCAAGATCAACGCTGGC------AGC---GGAAACGTCAATGTG---CAG---AAA---GCT---TAT---AAG---GCGATG---GCACTACTGGTGACGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILSA---I-TKTPV-GV------------FWR-LLIGSLVMLGFGFAGE---A------G--V-----------M----------------------DV------SLA-FWIAMAAWVFIMWEI-----F--F-GQASKINAG--S-GNVNV-Q-K-A-Y-K-AM-ALLVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-c]_KJ928783 [I-Gamma2-c] PRGD_OTU052_b0edb021a1fa8eb882ee764837a39b63 gb|KJ928783| PRGD_OTU052_b0edb021a1fa8eb882ee764837a39b63, putative proteorhodopsin gene, partial cds. PRGD_OTU052_b0edb021a1fa8eb882ee764837a39b63, putative proteorhodopsin gene, partial cds. KJ928783 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/C subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185) CTACTAACGGTTCCACTGTTGATCATAGAATTCTACCTGATTCTTTCTGCGATCACTAAAACGCCCGTAGGTGTGTTCTGGCGTTTGCTGATCGGGTCTCTCGTAATGCTGGGCTTTGGATTTGCCGGCGAAGCGGGTGTGATGGACGTGAGTTTGGCGTTTTGGATTGCAATGGCGGCTTGGGTCTTCATTATGTGGGAGATCTTTTTTGGTCAAGCGAGCAAGATCAACGCTGGCAGCGGAAACGTCAATGTGCAGAAAGCTTATAAGGCGATGGCACTACTGGTGACGATA LLTVPLLIIEFYLILSAITKTPVGVFWRLLIGSLVMLGFGFAGEAGVMDVSLAFWIAMAAWVFIMWEIFFGQASKINAGSGNVNVQKAYKAMALLVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTAACGGTTCCACTGTTGATCATAGAATTCTACCTGATTCTTTCTGCG---------ATC---ACTAAAACGCCCGTA---GGTGTG------------------------------------TTCTGGCGT---TTGCTGATCGGGTCTCTCGTAATGCTGGGCTTTGGATTTGCCGGCGAA---------GCG------------------GGT------GTG---------------------------------ATG------------------------------------------------------------------GACGTG------------------AGTTTGGCG---TTTTGGATTGCAATGGCGGCTTGGGTCTTCATTATGTGGGAGATC---------------TTT------TTT---GGTCAAGCGAGCAAGATCAACGCTGGC------AGC---GGAAACGTCAATGTG---CAG---AAA---GCT---TAT---AAG---GCGATG---GCACTACTGGTGACGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILSA---I-TKTPV-GV------------FWR-LLIGSLVMLGFGFAGE---A------G--V-----------M----------------------DV------SLA-FWIAMAAWVFIMWEI-----F--F-GQASKINAG--S-GNVNV-Q-K-A-Y-K-AM-ALLVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-c]_KJ928777 [I-Gamma2-c] PRGD_OTU052_4569e5d53a39b51fcd6d8c89f3c2bbc8 gb|KJ928777| PRGD_OTU052_4569e5d53a39b51fcd6d8c89f3c2bbc8, putative proteorhodopsin gene, partial cds. PRGD_OTU052_4569e5d53a39b51fcd6d8c89f3c2bbc8, putative proteorhodopsin gene, partial cds. KJ928777 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/C subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) CTACTAACGGTTCCACTGTTGATCATAGAATTCTACCTGATTCTTTCTGCGATCACTAAAACGCCCGTGGGTGTGTTTTGGCGTTTGTTGATCGGTTCTCTCGTCATGCTGGGCTTTGGCTTTGCTGGCGAAGCGGGCGCAATGGATGTGAGTTTGGCGTTTTGGATTGCAATGGCGGCTTGGGTCTTCATTATGTGGGAGATCTTTTTCGGTCAAGCGAGCAAGATCAACGCTGCCAGCGGAAACGCCAATGTGCAGAAAGCCTATAAGGCGATGGCATTGCTGGTGACGATA LLTVPLLIIEFYLILSAITKTPVGVFWRLLIGSLVMLGFGFAGEAGAMDVSLAFWIAMAAWVFIMWEIFFGQASKINAASGNANVQKAYKAMALLVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTAACGGTTCCACTGTTGATCATAGAATTCTACCTGATTCTTTCTGCG---------ATC---ACTAAAACGCCCGTG---GGTGTG------------------------------------TTTTGGCGT---TTGTTGATCGGTTCTCTCGTCATGCTGGGCTTTGGCTTTGCTGGCGAA---------GCG------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------GATGTG------------------AGTTTGGCG---TTTTGGATTGCAATGGCGGCTTGGGTCTTCATTATGTGGGAGATC---------------TTT------TTC---GGTCAAGCGAGCAAGATCAACGCTGCC------AGC---GGAAACGCCAATGTG---CAG---AAA---GCC---TAT---AAG---GCGATG---GCATTGCTGGTGACGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILSA---I-TKTPV-GV------------FWR-LLIGSLVMLGFGFAGE---A------G--A-----------M----------------------DV------SLA-FWIAMAAWVFIMWEI-----F--F-GQASKINAA--S-GNANV-Q-K-A-Y-K-AM-ALLVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-c]_KJ928786 [I-Gamma2-c] PRGD_OTU052_ed088bbdf02b956b11787a09dddb61ae gb|KJ928786| PRGD_OTU052_ed088bbdf02b956b11787a09dddb61ae, putative proteorhodopsin gene, partial cds. PRGD_OTU052_ed088bbdf02b956b11787a09dddb61ae, putative proteorhodopsin gene, partial cds. KJ928786 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/C subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Bering strait marine 67.49 -168.12 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-23.5956, 69.0419) CTACTAACGGTTCCACTGTTGATCATAGAATTCTACCTGATTCTTTCTGCGATCACTAAAACGCCCGTGGGTGTGTTTTGGCGTTTGTTGATCGGTTCTCTCGTCATGCTGGGCTTTGGATTTGCTGGCGAAGCGGGCGCAATGGATGTGAGTGTGGCGTTTTGGATTGCAATGGCGGCTTGGGTCTTCATTATGTGGGAGATCTTTTTCGGTCAAGCGAGCAAGATCAACGCTGCCAGCGGAAACGCCAATGTGCAGAAAGCCTATAAGGCGATGGCATTGCTGGTGACGATA LLTVPLLIIEFYLILSAITKTPVGVFWRLLIGSLVMLGFGFAGEAGAMDVSVAFWIAMAAWVFIMWEIFFGQASKINAASGNANVQKAYKAMALLVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTAACGGTTCCACTGTTGATCATAGAATTCTACCTGATTCTTTCTGCG---------ATC---ACTAAAACGCCCGTG---GGTGTG------------------------------------TTTTGGCGT---TTGTTGATCGGTTCTCTCGTCATGCTGGGCTTTGGATTTGCTGGCGAA---------GCG------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------GATGTG------------------AGTGTGGCG---TTTTGGATTGCAATGGCGGCTTGGGTCTTCATTATGTGGGAGATC---------------TTT------TTC---GGTCAAGCGAGCAAGATCAACGCTGCC------AGC---GGAAACGCCAATGTG---CAG---AAA---GCC---TAT---AAG---GCGATG---GCATTGCTGGTGACGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILSA---I-TKTPV-GV------------FWR-LLIGSLVMLGFGFAGE---A------G--A-----------M----------------------DV------SVA-FWIAMAAWVFIMWEI-----F--F-GQASKINAA--S-GNANV-Q-K-A-Y-K-AM-ALLVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-c]_KJ928773 [I-Gamma2-c] PRGD_OTU052_047398fb973a5eac01a381e84e1f9b83 gb|KJ928773| PRGD_OTU052_047398fb973a5eac01a381e84e1f9b83, putative proteorhodopsin gene, partial cds. PRGD_OTU052_047398fb973a5eac01a381e84e1f9b83, putative proteorhodopsin gene, partial cds. KJ928773 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/C subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185) TTACTCACGGTTCCACTACTCATCATAGAGTTTTACTTGATTCTTTCTGCAATCACTAAAACGCCCGTGGGTGTGTTTTGGCGTTTGTTGATCGGTTCTCTCGTCATGCTGGGCTTTGGCTTTGCTGGCGAAGCGGGCGCAATGGATGTGAGTTTGGCGTTTTGGATTGCAATGGCGGCTTGGGTCTTCATTATGTGGGAGATCTTTTTCGGTCAAGCGAGCAAGATCAACGCTGCCAGCGGAAACGCCAATGTGCAGAAAGCCTATAAGGCGATGGCATTGCTGGTGACGATA LLTVPLLIIEFYLILSAITKTPVGVFWRLLIGSLVMLGFGFAGEAGAMDVSLAFWIAMAAWVFIMWEIFFGQASKINAASGNANVQKAYKAMALLVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTCACGGTTCCACTACTCATCATAGAGTTTTACTTGATTCTTTCTGCA---------ATC---ACTAAAACGCCCGTG---GGTGTG------------------------------------TTTTGGCGT---TTGTTGATCGGTTCTCTCGTCATGCTGGGCTTTGGCTTTGCTGGCGAA---------GCG------------------GGC------GCA---------------------------------ATG------------------------------------------------------------------GATGTG------------------AGTTTGGCG---TTTTGGATTGCAATGGCGGCTTGGGTCTTCATTATGTGGGAGATC---------------TTT------TTC---GGTCAAGCGAGCAAGATCAACGCTGCC------AGC---GGAAACGCCAATGTG---CAG---AAA---GCC---TAT---AAG---GCGATG---GCATTGCTGGTGACGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILSA---I-TKTPV-GV------------FWR-LLIGSLVMLGFGFAGE---A------G--A-----------M----------------------DV------SLA-FWIAMAAWVFIMWEI-----F--F-GQASKINAA--S-GNANV-Q-K-A-Y-K-AM-ALLVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-c]_KJ928784 [I-Gamma2-c] PRGD_OTU052_b63d7bff70fcc7b3e39dcccd90ed8bdd gb|KJ928784| PRGD_OTU052_b63d7bff70fcc7b3e39dcccd90ed8bdd, putative proteorhodopsin gene, partial cds. PRGD_OTU052_b63d7bff70fcc7b3e39dcccd90ed8bdd, putative proteorhodopsin gene, partial cds. KJ928784 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/C subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833) TTACTAACGGTGCCACTGCTGATCATAGAGTTCTACTTGATTTTGTCTGCGATCACTAAAACGCCCGTAGGTGTTTTCTGGCGGTTGCTGATCGGGTCTCTCGTCATGCTGGGATTTGGATTTGCTGGCGAAGCGGGCGCGATGGACGTGAGTTTAGCGTTTTGGATTGCAATGGCGGCTTGGGTCTTCATTATGTGGGAGATCTTTTTCGGTCAAGCAAGCAAGATCAACGCTGGCAGCGGAAATGCCAATGTGCAGAAAGCCTATAAGGCGATGGCATGGCTGGTGACGATA LLTVPLLIIEFYLILSAITKTPVGVFWRLLIGSLVMLGFGFAGEAGAMDVSLAFWIAMAAWVFIMWEIFFGQASKINAGSGNANVQKAYKAMAWLVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTAACGGTGCCACTGCTGATCATAGAGTTCTACTTGATTTTGTCTGCG---------ATC---ACTAAAACGCCCGTA---GGTGTT------------------------------------TTCTGGCGG---TTGCTGATCGGGTCTCTCGTCATGCTGGGATTTGGATTTGCTGGCGAA---------GCG------------------GGC------GCG---------------------------------ATG------------------------------------------------------------------GACGTG------------------AGTTTAGCG---TTTTGGATTGCAATGGCGGCTTGGGTCTTCATTATGTGGGAGATC---------------TTT------TTC---GGTCAAGCAAGCAAGATCAACGCTGGC------AGC---GGAAATGCCAATGTG---CAG---AAA---GCC---TAT---AAG---GCGATG---GCATGGCTGGTGACGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILSA---I-TKTPV-GV------------FWR-LLIGSLVMLGFGFAGE---A------G--A-----------M----------------------DV------SLA-FWIAMAAWVFIMWEI-----F--F-GQASKINAG--S-GNANV-Q-K-A-Y-K-AM-AWLVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-c]_KJ928775 [I-Gamma2-c] PRGD_OTU052_0cc6a141e45ff5b0ccbc4b001a915d0d gb|KJ928775| PRGD_OTU052_0cc6a141e45ff5b0ccbc4b001a915d0d, putative proteorhodopsin gene, partial cds. PRGD_OTU052_0cc6a141e45ff5b0ccbc4b001a915d0d, putative proteorhodopsin gene, partial cds. KJ928775 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/C subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833) CTTCTAACGGTGCCACTTCTGATTATAGAGTTTTACCTGATTCTGTCTGCGATCACTAAAACGCCCGTAGGTGTGTTTTGGCGTTTGCTGATCGGTTCTCTCGTCATGCTGGGTTTTGGATTTGCCGGCGAAGCGGGCGCGATGGACGTGAGTTTGGCGTTTTGGATTGCAATGGCGGCTTGGGTCTTCATTATGTGGGAGATCTTTTTCGGTCAAGCGAGCAAGATCAACGCTGCCAGCGGTAACGCTAACGTGCAGAAAGCCTATAAGGCCATGGCATGGCTAGTGACGATA LLTVPLLIIEFYLILSAITKTPVGVFWRLLIGSLVMLGFGFAGEAGAMDVSLAFWIAMAAWVFIMWEIFFGQASKINAASGNANVQKAYKAMAWLVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTAACGGTGCCACTTCTGATTATAGAGTTTTACCTGATTCTGTCTGCG---------ATC---ACTAAAACGCCCGTA---GGTGTG------------------------------------TTTTGGCGT---TTGCTGATCGGTTCTCTCGTCATGCTGGGTTTTGGATTTGCCGGCGAA---------GCG------------------GGC------GCG---------------------------------ATG------------------------------------------------------------------GACGTG------------------AGTTTGGCG---TTTTGGATTGCAATGGCGGCTTGGGTCTTCATTATGTGGGAGATC---------------TTT------TTC---GGTCAAGCGAGCAAGATCAACGCTGCC------AGC---GGTAACGCTAACGTG---CAG---AAA---GCC---TAT---AAG---GCCATG---GCATGGCTAGTGACGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILSA---I-TKTPV-GV------------FWR-LLIGSLVMLGFGFAGE---A------G--A-----------M----------------------DV------SLA-FWIAMAAWVFIMWEI-----F--F-GQASKINAA--S-GNANV-Q-K-A-Y-K-AM-AWLVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-BD17]_KJ929567 [I-Gamma2-BD17] PRGD_OTU155_369069192ed2c20e9bf9802d881563ef gb|KJ929567| PRGD_OTU155_369069192ed2c20e9bf9802d881563ef, putative proteorhodopsin gene, partial cds. PRGD_OTU155_369069192ed2c20e9bf9802d881563ef, putative proteorhodopsin gene, partial cds. KJ929567 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/BD17 HTCC2143-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 BD17 HTCC2143-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGCTCACTGTGCCGCTGTTGATTATTGAGTTCTACTTGATTCTTTCAGCGATTACTAAAGTGCCAATAGGCGTATTCCAACGCTTGCTTGCAGGTTCACTGATCATGCTGGTCGCTGGCTTTATGGGCGAAGCAGGCTACATGGATGTGACTTTGGGCTTCATTATTGGCATGGCCGGTTGGATATGGGTTCTGTATGAGATCTTTGCTGGTGAAGCTAGCCAGATCAACGCAGCCAGCGCCAATGCGATCTGTCAGAAGGCCTACAGTTCCATGAAGTGGTTAGTCTCGATT LLTVPLLIIEFYLILSAITKVPIGVFQRLLAGSLIMLVAGFMGEAGYMDVTLGFIIGMAGWIWVLYEIFAGEASQINAASANAICQKAYSSMKWLVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTCACTGTGCCGCTGTTGATTATTGAGTTCTACTTGATTCTTTCAGCG---------ATT---ACTAAAGTGCCAATA---GGCGTA------------------------------------TTCCAACGC---TTGCTTGCAGGTTCACTGATCATGCTGGTCGCTGGCTTTATGGGCGAA---------GCA------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GATGTG------------------ACTTTGGGC---TTCATTATTGGCATGGCCGGTTGGATATGGGTTCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTAGCCAGATCAACGCAGCC------AGC---GCCAATGCGATCTGT---CAG---AAG---GCC---TAC---AGT---TCCATG---AAGTGGTTAGTCTCGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILSA---I-TKVPI-GV------------FQR-LLAGSLIMLVAGFMGE---A------G--Y-----------M----------------------DV------TLG-FIIGMAGWIWVLYEI-----F--A-GEASQINAA--S-ANAIC-Q-K-A-Y-S-SM-KWLVSI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-BD17]_KJ929566 [I-Gamma2-BD17] PRGD_OTU155_otuREP_e87967cde45c52687d520278b4e88559 gb|KJ929566| PRGD_OTU155_otuREP_e87967cde45c52687d520278b4e88559, putative proteorhodopsin gene, partial cds. PRGD_OTU155_otuREP_e87967cde45c52687d520278b4e88559, putative proteorhodopsin gene, partial cds. KJ929566 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/BD17 HTCC2143-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 BD17 HTCC2143-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; ; 67.49, -168.12), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGCTCACTGTGCCGCTGTTGATTATTGAGTTCTACTTGATTCTTTCAGCGATTACTAAAGTGCCAATAGGCGTATTCCAACGCTTGCTTGCAGGTTCACTGATCATGCTGGTCGCTGGCTTTATGGGCGAAGCAGGCTACATGGATGTGACTCTGGGCTTCATCATCGGCATGGCCGGTTGGATATGGGTTCTGTATGAGATCTTTGCTGGTGAAGCTAGCCAGATCAACGCAGCCAGCGCCAATGCGATCTGTCAGAAGGCCTACAGTTCCATGAAGTGGTTAGTGTCGATT LLTVPLLIIEFYLILSAITKVPIGVFQRLLAGSLIMLVAGFMGEAGYMDVTLGFIIGMAGWIWVLYEIFAGEASQINAASANAICQKAYSSMKWLVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTCACTGTGCCGCTGTTGATTATTGAGTTCTACTTGATTCTTTCAGCG---------ATT---ACTAAAGTGCCAATA---GGCGTA------------------------------------TTCCAACGC---TTGCTTGCAGGTTCACTGATCATGCTGGTCGCTGGCTTTATGGGCGAA---------GCA------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GATGTG------------------ACTCTGGGC---TTCATCATCGGCATGGCCGGTTGGATATGGGTTCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTAGCCAGATCAACGCAGCC------AGC---GCCAATGCGATCTGT---CAG---AAG---GCC---TAC---AGT---TCCATG---AAGTGGTTAGTGTCGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILSA---I-TKVPI-GV------------FQR-LLAGSLIMLVAGFMGE---A------G--Y-----------M----------------------DV------TLG-FIIGMAGWIWVLYEI-----F--A-GEASQINAA--S-ANAIC-Q-K-A-Y-S-SM-KWLVSI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-BD17]_KJ929568 [I-Gamma2-BD17] PRGD_OTU155_efbbea6920c3b5116142f42509693194 gb|KJ929568| PRGD_OTU155_efbbea6920c3b5116142f42509693194, putative proteorhodopsin gene, partial cds. PRGD_OTU155_efbbea6920c3b5116142f42509693194, putative proteorhodopsin gene, partial cds. KJ929568 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/BD17 HTCC2143-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 BD17 HTCC2143-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; ; 67.49, -168.12), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) TTGCTCACTGTGCCGCTGTTGATTATTGAGTTCTACTTGATTCTTTCAGCGATTACTAAAGTGCCAATAGGCGTATTCCAACGCTTGCTTGCAGGTTCACTGATCATGCTGGTCGCTGGCTTTATGGGCGAAGCAGGCTTCATGGATGTGACTTTGGGCTTCATTATCGGCATGGCCGGTTGGATATGGGTCCTGTATGAGATCTTTGCTGGTGAAGCTAGCCAGATCAACGCAGCCAGCGCCAATGCGATCTGTCAGAAGGCCTACAGTTCCATGAAGTGGTTAGTGTCGATT LLTVPLLIIEFYLILSAITKVPIGVFQRLLAGSLIMLVAGFMGEAGFMDVTLGFIIGMAGWIWVLYEIFAGEASQINAASANAICQKAYSSMKWLVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTCACTGTGCCGCTGTTGATTATTGAGTTCTACTTGATTCTTTCAGCG---------ATT---ACTAAAGTGCCAATA---GGCGTA------------------------------------TTCCAACGC---TTGCTTGCAGGTTCACTGATCATGCTGGTCGCTGGCTTTATGGGCGAA---------GCA------------------GGC------TTC---------------------------------ATG------------------------------------------------------------------GATGTG------------------ACTTTGGGC---TTCATTATCGGCATGGCCGGTTGGATATGGGTCCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTAGCCAGATCAACGCAGCC------AGC---GCCAATGCGATCTGT---CAG---AAG---GCC---TAC---AGT---TCCATG---AAGTGGTTAGTGTCGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILSA---I-TKVPI-GV------------FQR-LLAGSLIMLVAGFMGE---A------G--F-----------M----------------------DV------TLG-FIIGMAGWIWVLYEI-----F--A-GEASQINAA--S-ANAIC-Q-K-A-Y-S-SM-KWLVSI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-BD17]_KJ929569 [I-Gamma2-BD17] PRGD_OTU155_fa2613ae5b330ae155d55a71d8d99f27 gb|KJ929569| PRGD_OTU155_fa2613ae5b330ae155d55a71d8d99f27, putative proteorhodopsin gene, partial cds. PRGD_OTU155_fa2613ae5b330ae155d55a71d8d99f27, putative proteorhodopsin gene, partial cds. KJ929569 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/BD17 HTCC2143-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 BD17 HTCC2143-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTGCTCACTGTGCCGCTGTTGATTATTGAGTTCTACTTGATTCTTTCAGCGATTACTAAAGTGCCAATAGGCGTATTCCAACGCTTGCTTGCAGGTTCACTGATCATGCTGGTCGCTGGCTTTATGGGCGAAGCAGGCTACATGGATGTGACTTGGGGCTTCATTATTGGCATGGTCGGTTGGATATGGGTTCTGTATGAGATCTTTGCTGGTGAAGCTAGCAAGATCAACGCAGCCAGCGCCAATGCGATCTGTCAGAAGGCCTACAGTTCCATGAAGTGGTTAGTGTCGATT LLTVPLLIIEFYLILSAITKVPIGVFQRLLAGSLIMLVAGFMGEAGYMDVTWGFIIGMVGWIWVLYEIFAGEASKINAASANAICQKAYSSMKWLVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTCACTGTGCCGCTGTTGATTATTGAGTTCTACTTGATTCTTTCAGCG---------ATT---ACTAAAGTGCCAATA---GGCGTA------------------------------------TTCCAACGC---TTGCTTGCAGGTTCACTGATCATGCTGGTCGCTGGCTTTATGGGCGAA---------GCA------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------GATGTG------------------ACTTGGGGC---TTCATTATTGGCATGGTCGGTTGGATATGGGTTCTGTATGAGATC---------------TTT------GCT---GGTGAAGCTAGCAAGATCAACGCAGCC------AGC---GCCAATGCGATCTGT---CAG---AAG---GCC---TAC---AGT---TCCATG---AAGTGGTTAGTGTCGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILSA---I-TKVPI-GV------------FQR-LLAGSLIMLVAGFMGE---A------G--Y-----------M----------------------DV------TWG-FIIGMVGWIWVLYEI-----F--A-GEASKINAA--S-ANAIC-Q-K-A-Y-S-SM-KWLVSI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-BD17]_KJ929422 [I-Gamma2-BD17] PRGD_OTU122_otuREP_09198baec00aee0ec445a2265511b255 gb|KJ929422| PRGD_OTU122_otuREP_09198baec00aee0ec445a2265511b255, putative proteorhodopsin gene, partial cds. PRGD_OTU122_otuREP_09198baec00aee0ec445a2265511b255, putative proteorhodopsin gene, partial cds. KJ929422 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/BD17 HTCC2143-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 BD17 HTCC2143-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTGCTCACAGTGCCACTACTGATCATCGAATTCTATTTGATCCTATCTGCCATTACTAAAGTACCTGTCGGCGTTTTCTGGCGTTTACTAGCAGGCTCTTTGATTATGCTTGTTGCTGGTTTTGCTGGCGAAGTAAATCCTGATTACGTAGTCTCTGGCTTCGTTGTTGGTATGCTGGGTTGGATCTGGATCATGTATGAAATCTTTATGGGTGAAGCGAGCAAGATCAACGCTGCCAGTGGTAATGCCATTGCTCAGAAAGCTTACGGCGCCATGCGTATGCTGGTTACTGTT LLTVPLLIIEFYLILSAITKVPVGVFWRLLAGSLIMLVAGFAGEVNPDYVVSGFVVGMLGWIWIMYEIFMGEASKINAASGNAIAQKAYGAMRMLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTCACAGTGCCACTACTGATCATCGAATTCTATTTGATCCTATCTGCC---------ATT---ACTAAAGTACCTGTC---GGCGTT------------------------------------TTCTGGCGT---TTACTAGCAGGCTCTTTGATTATGCTTGTTGCTGGTTTTGCTGGCGAA---------GTA------------------AAT------CCT---------------------------------GAT------------------------------------------------------------------TACGTA------------------GTCTCTGGC---TTCGTTGTTGGTATGCTGGGTTGGATCTGGATCATGTATGAAATC---------------TTT------ATG---GGTGAAGCGAGCAAGATCAACGCTGCC------AGT---GGTAATGCCATTGCT---CAG---AAA---GCT---TAC---GGC---GCCATG---CGTATGCTGGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILSA---I-TKVPV-GV------------FWR-LLAGSLIMLVAGFAGE---V------N--P-----------D----------------------YV------VSG-FVVGMLGWIWIMYEI-----F--M-GEASKINAA--S-GNAIA-Q-K-A-Y-G-AM-RMLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-BD17]_KJ929425 [I-Gamma2-BD17] PRGD_OTU122_d4d53bfce92f9bdd39f8220f72a700bb gb|KJ929425| PRGD_OTU122_d4d53bfce92f9bdd39f8220f72a700bb, putative proteorhodopsin gene, partial cds. PRGD_OTU122_d4d53bfce92f9bdd39f8220f72a700bb, putative proteorhodopsin gene, partial cds. KJ929425 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/BD17 HTCC2143-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 BD17 HTCC2143-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Bering strait marine 67.49 -168.12 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; ; 67.49, -168.12), English Channel (48.7717, -3.9683) CTGCTCACAGTGCCACTACTGATCATCGAATTCTATTTGATCCTATCTGCCATTACTAAAGTACCTGTCGGCGTTTTCTGGCGTTTACTAGCAGGCTCTTTGATTATGCTTGTTGCTGGTTTTGCTGGCGAAGTAGATCCTGATTACCGAGCCTCTGGCTTCGTTGTTGGTATGCTGGGTTGGATCTGGATCATGTATGAAATCTTTATGGGTGAAGCGAGCAAGATCAACGCTGCCAGTGGCAATGCCATTGCTCAGAAAGCTTACGGCGCCATGCGTATGCTGGTTACTGTT LLTVPLLIIEFYLILSAITKVPVGVFWRLLAGSLIMLVAGFAGEVDPDYRASGFVVGMLGWIWIMYEIFMGEASKINAASGNAIAQKAYGAMRMLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTCACAGTGCCACTACTGATCATCGAATTCTATTTGATCCTATCTGCC---------ATT---ACTAAAGTACCTGTC---GGCGTT------------------------------------TTCTGGCGT---TTACTAGCAGGCTCTTTGATTATGCTTGTTGCTGGTTTTGCTGGCGAA---------GTA------------------GAT------CCT---------------------------------GAT------------------------------------------------------------------TACCGA------------------GCCTCTGGC---TTCGTTGTTGGTATGCTGGGTTGGATCTGGATCATGTATGAAATC---------------TTT------ATG---GGTGAAGCGAGCAAGATCAACGCTGCC------AGT---GGCAATGCCATTGCT---CAG---AAA---GCT---TAC---GGC---GCCATG---CGTATGCTGGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILSA---I-TKVPV-GV------------FWR-LLAGSLIMLVAGFAGE---V------D--P-----------D----------------------YR------ASG-FVVGMLGWIWIMYEI-----F--M-GEASKINAA--S-GNAIA-Q-K-A-Y-G-AM-RMLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-BD17]_KJ929426 [I-Gamma2-BD17] PRGD_OTU122_fbe0ec79e58668ca843bd2eb7d9e5c4b gb|KJ929426| PRGD_OTU122_fbe0ec79e58668ca843bd2eb7d9e5c4b, putative proteorhodopsin gene, partial cds. PRGD_OTU122_fbe0ec79e58668ca843bd2eb7d9e5c4b, putative proteorhodopsin gene, partial cds. KJ929426 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/BD17 HTCC2143-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 BD17 HTCC2143-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683) CTGCTCACAGTGCCACTACTGATCATCGAATTCTATTTGATCCTATCTGCCATTACTAAAGTACCTGTCGGCGTTTTCTGGCGTTTACTAGCAGGCTCTTTGATTATGCTTGTTGCTGGTTTTGCTGGCGAAGTAAATCCTGATTACGTAGTCTCTGGCTTCGTTGTGGGTATGCTGGGTTGGATCTGGATCATGTATGAAATCTTTATGGGTGAAGCGAGCAAGATCAACGCTGCCAGTGGTAATGCCATTGCTCAGAAAGCCTACGGTGCCATGCGTATGTTGGTTACTGTT LLTVPLLIIEFYLILSAITKVPVGVFWRLLAGSLIMLVAGFAGEVNPDYVVSGFVVGMLGWIWIMYEIFMGEASKINAASGNAIAQKAYGAMRMLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTCACAGTGCCACTACTGATCATCGAATTCTATTTGATCCTATCTGCC---------ATT---ACTAAAGTACCTGTC---GGCGTT------------------------------------TTCTGGCGT---TTACTAGCAGGCTCTTTGATTATGCTTGTTGCTGGTTTTGCTGGCGAA---------GTA------------------AAT------CCT---------------------------------GAT------------------------------------------------------------------TACGTA------------------GTCTCTGGC---TTCGTTGTGGGTATGCTGGGTTGGATCTGGATCATGTATGAAATC---------------TTT------ATG---GGTGAAGCGAGCAAGATCAACGCTGCC------AGT---GGTAATGCCATTGCT---CAG---AAA---GCC---TAC---GGT---GCCATG---CGTATGTTGGTTACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILSA---I-TKVPV-GV------------FWR-LLAGSLIMLVAGFAGE---V------N--P-----------D----------------------YV------VSG-FVVGMLGWIWIMYEI-----F--M-GEASKINAA--S-GNAIA-Q-K-A-Y-G-AM-RMLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-BD17]_KJ929424 [I-Gamma2-BD17] PRGD_OTU122_a01a655846c556ed764726b54e235a46 gb|KJ929424| PRGD_OTU122_a01a655846c556ed764726b54e235a46, putative proteorhodopsin gene, partial cds. PRGD_OTU122_a01a655846c556ed764726b54e235a46, putative proteorhodopsin gene, partial cds. KJ929424 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/BD17 HTCC2143-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 BD17 HTCC2143-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Bering strait marine 67.49 -168.12 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097), Arctic Ocean-Pacific side (70.9139, -128.9264; ; ; 67.49, -168.12), English Channel (48.7717, -3.9683) CTGCTCACAGTGCCTCTGCTGATCATTGAATTCTATTTGATTCTATCTGCCATCACTAAAGTACCCGTCGGCGTTTTCTGGCGCTTACTGGCAGGTTCTTTGATTATGCTTGGTGCTGGTTTTGTCGGCGAAGTAAATCCTGACTATGTTGTCTCTGGCTTTGTGGTTGGAATGCTGGGCTGGATATGGATCATGTACGAGATCTTTCTCGGTGAGGCTAGCAAGATCAACGCTGCCAGTGGTAATGCAATTGCACAGAAAGCCTACGGCGCAATGCGTTTGTTGGTGACTGTT LLTVPLLIIEFYLILSAITKVPVGVFWRLLAGSLIMLGAGFVGEVNPDYVVSGFVVGMLGWIWIMYEIFLGEASKINAASGNAIAQKAYGAMRLLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTCACAGTGCCTCTGCTGATCATTGAATTCTATTTGATTCTATCTGCC---------ATC---ACTAAAGTACCCGTC---GGCGTT------------------------------------TTCTGGCGC---TTACTGGCAGGTTCTTTGATTATGCTTGGTGCTGGTTTTGTCGGCGAA---------GTA------------------AAT------CCT---------------------------------GAC------------------------------------------------------------------TATGTT------------------GTCTCTGGC---TTTGTGGTTGGAATGCTGGGCTGGATATGGATCATGTACGAGATC---------------TTT------CTC---GGTGAGGCTAGCAAGATCAACGCTGCC------AGT---GGTAATGCAATTGCA---CAG---AAA---GCC---TAC---GGC---GCAATG---CGTTTGTTGGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILSA---I-TKVPV-GV------------FWR-LLAGSLIMLGAGFVGE---V------N--P-----------D----------------------YV------VSG-FVVGMLGWIWIMYEI-----F--L-GEASKINAA--S-GNAIA-Q-K-A-Y-G-AM-RLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-BD17]_KJ929423 [I-Gamma2-BD17] PRGD_OTU122_658ab67104032223c01beafca2d9e628 gb|KJ929423| PRGD_OTU122_658ab67104032223c01beafca2d9e628, putative proteorhodopsin gene, partial cds. PRGD_OTU122_658ab67104032223c01beafca2d9e628, putative proteorhodopsin gene, partial cds. KJ929423 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/BD17 HTCC2143-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 BD17 HTCC2143-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTACTCACAGTTCCGCTTCTCATTATTGAGTTCTATTTGATTCTATCTGCCATTACCAAGGTGCCTGCAGGCGTATTCTGGCGCTTGCTCGCAGGGTCTTTGATTATGCTTGGCGCAGGCTTTTTGGGTGAAGTTAACCCAGCATATGTCACCTCAGGCTTCATAGTGGGTATGTTAGGTTGGTTGTGGATCATGTACGAAATCTTCTACGGCGAAGCAAGCAAGCTAAACGCGGCAAGCGGTAGCGTTATCGTACAAAAAGCCTATGGTGCAATGCGTTTGTTAGTGACTGTA LLTVPLLIIEFYLILSAITKVPAGVFWRLLAGSLIMLGAGFLGEVNPAYVTSGFIVGMLGWLWIMYEIFYGEASKLNAASGSVIVQKAYGAMRLLVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTCACAGTTCCGCTTCTCATTATTGAGTTCTATTTGATTCTATCTGCC---------ATT---ACCAAGGTGCCTGCA---GGCGTA------------------------------------TTCTGGCGC---TTGCTCGCAGGGTCTTTGATTATGCTTGGCGCAGGCTTTTTGGGTGAA---------GTT------------------AAC------CCA---------------------------------GCA------------------------------------------------------------------TATGTC------------------ACCTCAGGC---TTCATAGTGGGTATGTTAGGTTGGTTGTGGATCATGTACGAAATC---------------TTC------TAC---GGCGAAGCAAGCAAGCTAAACGCGGCA------AGC---GGTAGCGTTATCGTA---CAA---AAA---GCC---TAT---GGT---GCAATG---CGTTTGTTAGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLIIEFYLILSA---I-TKVPA-GV------------FWR-LLAGSLIMLGAGFLGE---V------N--P-----------A----------------------YV------TSG-FIVGMLGWLWIMYEI-----F--Y-GEASKLNAA--S-GSVIV-Q-K-A-Y-G-AM-RLLVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-BD17]_KJ929591 [I-Gamma2-BD17] PRGD_OTU162_7e7949092e54006582775fe473f1b4c6 gb|KJ929591| PRGD_OTU162_7e7949092e54006582775fe473f1b4c6, putative proteorhodopsin gene, partial cds. PRGD_OTU162_7e7949092e54006582775fe473f1b4c6, putative proteorhodopsin gene, partial cds. KJ929591 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/BD17 HTCC2143-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 BD17 HTCC2143-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -33.28, 45.35) TTATTAACAGTTCCATTGCAGATGATTGAGTTCTACTTGATTCTTGCAGCCATTGCAGTCGTAGCCTCTGGTGTGTTCTGGCGCTTGTTGATCGGTACACTGGTTATGCTAGTGGGCGGTTTCATGGGCGAAGCCGGCATGATGGACCCAACCGTTGGATTCATTATTGGGATGGCAGGGTGGATATTCATCTTGTATGAAATATTTGCAGGCGAAGCCAGCCAGATCAATGCGGCCAGCGGTAACGTAAATTGCCAAAAAGCGTTCAATGGCATGAAATGGATCGTAACAATT LLTVPLQMIEFYLILAAIAVVASGVFWRLLIGTLVMLVGGFMGEAGMMDPTVGFIIGMAGWIFILYEIFAGEASQINAASGNVNCQKAFNGMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACAGTTCCATTGCAGATGATTGAGTTCTACTTGATTCTTGCAGCC---------ATT---GCAGTCGTAGCCTCT---GGTGTG------------------------------------TTCTGGCGC---TTGTTGATCGGTACACTGGTTATGCTAGTGGGCGGTTTCATGGGCGAA---------GCC------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GACCCA------------------ACCGTTGGA---TTCATTATTGGGATGGCAGGGTGGATATTCATCTTGTATGAAATA---------------TTT------GCA---GGCGAAGCCAGCCAGATCAATGCGGCC------AGC---GGTAACGTAAATTGC---CAA---AAA---GCG---TTC---AAT---GGCATG---AAATGGATCGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMIEFYLILAA---I-AVVAS-GV------------FWR-LLIGTLVMLVGGFMGE---A------G--M-----------M----------------------DP------TVG-FIIGMAGWIFILYEI-----F--A-GEASQINAA--S-GNVNC-Q-K-A-F-N-GM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-BD17]_KJ929592 [I-Gamma2-BD17] PRGD_OTU162_b5023e98975c2794c716192be3702be5 gb|KJ929592| PRGD_OTU162_b5023e98975c2794c716192be3702be5, putative proteorhodopsin gene, partial cds. PRGD_OTU162_b5023e98975c2794c716192be3702be5, putative proteorhodopsin gene, partial cds. KJ929592 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/BD17 HTCC2143-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 BD17 HTCC2143-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (67.49, -168.12) TTATTAACAGTTCCATTGCAGATGATTGAATTCTACTTGATTCTTGCAGCTATAGCGGTCGTGGCCTCTGGTGTATTCTGGCGCTTGTTGATCGGTACGTTGGTTATGCTTGTGGGCGGCTTCATGGGCGAAGCTGGCATGATGGACCCAACCGTTGGATTCATTATTGGAATGGCAGGTTGGATATTTATCTTGTACGAAATATTTGCAGGCGAAGCCAGCCAGATCAACGCGGCCAGCGGTAACGTAAACTGCCAAAAAGCGTTCAACGGCATGAAATGGATCGTAACAATT LLTVPLQMIEFYLILAAIAVVASGVFWRLLIGTLVMLVGGFMGEAGMMDPTVGFIIGMAGWIFILYEIFAGEASQINAASGNVNCQKAFNGMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACAGTTCCATTGCAGATGATTGAATTCTACTTGATTCTTGCAGCT---------ATA---GCGGTCGTGGCCTCT---GGTGTA------------------------------------TTCTGGCGC---TTGTTGATCGGTACGTTGGTTATGCTTGTGGGCGGCTTCATGGGCGAA---------GCT------------------GGC------ATG---------------------------------ATG------------------------------------------------------------------GACCCA------------------ACCGTTGGA---TTCATTATTGGAATGGCAGGTTGGATATTTATCTTGTACGAAATA---------------TTT------GCA---GGCGAAGCCAGCCAGATCAACGCGGCC------AGC---GGTAACGTAAACTGC---CAA---AAA---GCG---TTC---AAC---GGCATG---AAATGGATCGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMIEFYLILAA---I-AVVAS-GV------------FWR-LLIGTLVMLVGGFMGE---A------G--M-----------M----------------------DP------TVG-FIIGMAGWIFILYEI-----F--A-GEASQINAA--S-GNVNC-Q-K-A-F-N-GM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-BD17]_KJ929590 [I-Gamma2-BD17] PRGD_OTU162_otuREP_a17c17f94cb40358269786e201c0be64 gb|KJ929590| PRGD_OTU162_otuREP_a17c17f94cb40358269786e201c0be64, putative proteorhodopsin gene, partial cds. PRGD_OTU162_otuREP_a17c17f94cb40358269786e201c0be64, putative proteorhodopsin gene, partial cds. KJ929590 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/BD17 HTCC2143-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 BD17 HTCC2143-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), English Channel (48.7717, -3.9683) TTATTAACAGTCCCATTACAAATGATCGAGTTTTACTTGATTCTCGCAGCCATAGCGGTCGTGGCTTCTGGTGTATTCTGGCGCTTGTTGATCGGCACACTGGTCATGCTGTTGGGTGGCTTCATGGGCGAAGCTGGTATGATGGACCCAACCGTTGGATTCATTATTGGGATGGCAGGTTGGATATTCATCTTGTATGAAATATTTGCAGGTGAAGCCAGCCAGATCAACGCGGCCAGCGGTAACGAAAACTGCCAAAAAGCGTTTAATGGTATGAAGTGGATCGTAACAATT LLTVPLQMIEFYLILAAIAVVASGVFWRLLIGTLVMLLGGFMGEAGMMDPTVGFIIGMAGWIFILYEIFAGEASQINAASGNENCQKAFNGMKWIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACAGTCCCATTACAAATGATCGAGTTTTACTTGATTCTCGCAGCC---------ATA---GCGGTCGTGGCTTCT---GGTGTA------------------------------------TTCTGGCGC---TTGTTGATCGGCACACTGGTCATGCTGTTGGGTGGCTTCATGGGCGAA---------GCT------------------GGT------ATG---------------------------------ATG------------------------------------------------------------------GACCCA------------------ACCGTTGGA---TTCATTATTGGGATGGCAGGTTGGATATTCATCTTGTATGAAATA---------------TTT------GCA---GGTGAAGCCAGCCAGATCAACGCGGCC------AGC---GGTAACGAAAACTGC---CAA---AAA---GCG---TTT---AAT---GGTATG---AAGTGGATCGTAACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMIEFYLILAA---I-AVVAS-GV------------FWR-LLIGTLVMLLGGFMGE---A------G--M-----------M----------------------DP------TVG-FIIGMAGWIFILYEI-----F--A-GEASQINAA--S-GNENC-Q-K-A-F-N-GM-KWIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-b]_KJ928726 [I-Gamma2-b] PRGD_OTU049_3f8cd6e0563ef1b639a42120f302c8e2 gb|KJ928726| PRGD_OTU049_3f8cd6e0563ef1b639a42120f302c8e2, putative proteorhodopsin gene, partial cds. PRGD_OTU049_3f8cd6e0563ef1b639a42120f302c8e2, putative proteorhodopsin gene, partial cds. KJ928726 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTATTAACTGTCCCCCTGCAGATTATCGAATTTTTCCTGATTCTGGCCGCGATTACGGTGGTGCCAGCATCGCTGTTTTGGAAACTGTTGATTGCCTCGATTGTTATGTTGGTGGGTGGTTATCTTGGCGAAGCGGGCTTTATTGATGTTACCGTTGGCTTTGTAATTGGAATGGTCGGCTGGCTCTATATCATCTATGAAATTTTCGTGGGCGAAGCGAGTAAGATAAATGCAAGTAGTGGTAATGCTGCAAGTCAAAGTGCGTTCAAAACGATTCGATTAATTGTGACGATT LLTVPLQIIEFFLILAAITVVPASLFWKLLIASIVMLVGGYLGEAGFIDVTVGFVIGMVGWLYIIYEIFVGEASKINASSGNAASQSAFKTIRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACTGTCCCCCTGCAGATTATCGAATTTTTCCTGATTCTGGCCGCG---------ATT---ACGGTGGTGCCAGCA---TCGCTG------------------------------------TTTTGGAAA---CTGTTGATTGCCTCGATTGTTATGTTGGTGGGTGGTTATCTTGGCGAA---------GCG------------------GGC------TTT---------------------------------ATT------------------------------------------------------------------GATGTT------------------ACCGTTGGC---TTTGTAATTGGAATGGTCGGCTGGCTCTATATCATCTATGAAATT---------------TTC------GTG---GGCGAAGCGAGTAAGATAAATGCAAGT------AGT---GGTAATGCTGCAAGT---CAA---AGT---GCG---TTC---AAA---ACGATT---CGATTAATTGTGACGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILAA---I-TVVPA-SL------------FWK-LLIASIVMLVGGYLGE---A------G--F-----------I----------------------DV------TVG-FVIGMVGWLYIIYEI-----F--V-GEASKINAS--S-GNAAS-Q-S-A-F-K-TI-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-b]_KJ928720 [I-Gamma2-b] PRGD_OTU049_otuREP_571bddf6ec188785bb4a4ce7c2d8e559 gb|KJ928720| PRGD_OTU049_otuREP_571bddf6ec188785bb4a4ce7c2d8e559, putative proteorhodopsin gene, partial cds. PRGD_OTU049_otuREP_571bddf6ec188785bb4a4ce7c2d8e559, putative proteorhodopsin gene, partial cds. KJ928720 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTATTAACTGTCCCCCTGCAGATTATCGAATTTTTCCTGATTCTGGCCGCGATTACGGTGGTGCCAGCATCGCTGTTTTGGAAACTGTTGATTGCCTCGATTGTTATGTTGGTGGGTGGTTATCTTGGCGAAGCGGGCTTTATTGATGTTACCGTTGGCTTTGTAATTGGAATGGTCGGCTGGCTCTATATCATCTATGAAATTTTCGTGGGCGAAGCGAGTAAGATAAATGCAAGTAGTGGTAATGCTGCAAGTCAAAGTGCGTTTAAGACTATTCGACTCATCGTGACGATT LLTVPLQIIEFFLILAAITVVPASLFWKLLIASIVMLVGGYLGEAGFIDVTVGFVIGMVGWLYIIYEIFVGEASKINASSGNAASQSAFKTIRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACTGTCCCCCTGCAGATTATCGAATTTTTCCTGATTCTGGCCGCG---------ATT---ACGGTGGTGCCAGCA---TCGCTG------------------------------------TTTTGGAAA---CTGTTGATTGCCTCGATTGTTATGTTGGTGGGTGGTTATCTTGGCGAA---------GCG------------------GGC------TTT---------------------------------ATT------------------------------------------------------------------GATGTT------------------ACCGTTGGC---TTTGTAATTGGAATGGTCGGCTGGCTCTATATCATCTATGAAATT---------------TTC------GTG---GGCGAAGCGAGTAAGATAAATGCAAGT------AGT---GGTAATGCTGCAAGT---CAA---AGT---GCG---TTT---AAG---ACTATT---CGACTCATCGTGACGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILAA---I-TVVPA-SL------------FWK-LLIASIVMLVGGYLGE---A------G--F-----------I----------------------DV------TVG-FVIGMVGWLYIIYEI-----F--V-GEASKINAS--S-GNAAS-Q-S-A-F-K-TI-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-b]_KJ928731 [I-Gamma2-b] PRGD_OTU049_8067cd82873a7b67c3982ddb5f95329d gb|KJ928731| PRGD_OTU049_8067cd82873a7b67c3982ddb5f95329d, putative proteorhodopsin gene, partial cds. PRGD_OTU049_8067cd82873a7b67c3982ddb5f95329d, putative proteorhodopsin gene, partial cds. KJ928731 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTATTAACTGTCCCTCTCCAGATTATCGAATTTTTCCTGATTCTGGCTGCGATTACGGTGGTGCCAGCATCGCTGTTTTGGAAACTGTTGATTGCCTCGATTGTTATGTTGGTGGGTGGTTATCTTGGCGAAGCGGGCTTTATTGATGTTACCGTTGGCTTTGTAATTGGAATGGTCGGCTGGCTTTATATCATCTACGAAATTTTCGTGGGCGAAGCGAGTAAGATAAATGCAAGTAGTGGTAATGCTGCAAGTCAAAGTGCGTTTAAGACTATTCGACTCATCGTGACCATT LLTVPLQIIEFFLILAAITVVPASLFWKLLIASIVMLVGGYLGEAGFIDVTVGFVIGMVGWLYIIYEIFVGEASKINASSGNAASQSAFKTIRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACTGTCCCTCTCCAGATTATCGAATTTTTCCTGATTCTGGCTGCG---------ATT---ACGGTGGTGCCAGCA---TCGCTG------------------------------------TTTTGGAAA---CTGTTGATTGCCTCGATTGTTATGTTGGTGGGTGGTTATCTTGGCGAA---------GCG------------------GGC------TTT---------------------------------ATT------------------------------------------------------------------GATGTT------------------ACCGTTGGC---TTTGTAATTGGAATGGTCGGCTGGCTTTATATCATCTACGAAATT---------------TTC------GTG---GGCGAAGCGAGTAAGATAAATGCAAGT------AGT---GGTAATGCTGCAAGT---CAA---AGT---GCG---TTT---AAG---ACTATT---CGACTCATCGTGACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILAA---I-TVVPA-SL------------FWK-LLIASIVMLVGGYLGE---A------G--F-----------I----------------------DV------TVG-FVIGMVGWLYIIYEI-----F--V-GEASKINAS--S-GNAAS-Q-S-A-F-K-TI-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-b]_KJ928729 [I-Gamma2-b] PRGD_OTU049_76bf1fe5e852dc05e987c0b64d547348 gb|KJ928729| PRGD_OTU049_76bf1fe5e852dc05e987c0b64d547348, putative proteorhodopsin gene, partial cds. PRGD_OTU049_76bf1fe5e852dc05e987c0b64d547348, putative proteorhodopsin gene, partial cds. KJ928729 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTATTGACTGTCCCTCTGCAGATTATCGAATTTTTCCTGATCCTGGCTGCGATTACGGTGGTGCCAGCATCGTTGTTTTGGAAACTGTTGATTGCCTCGATTGTTATGTTGGTGGGCGGTTATCTTGGCGAAGCGGGCTTTATTGATGTTACCGTTGGCTTTGTAATTGGAATGGTCGGTTGGCTCTATATCATCTATGAAATTTTTGTGGGCGAAGCGAGTAAGATAAATGCAAGTAGTGGCAATGCTGCAAGTCAAAGTGCGTTTAAGACTATTCGACTCATCGTGACAATT LLTVPLQIIEFFLILAAITVVPASLFWKLLIASIVMLVGGYLGEAGFIDVTVGFVIGMVGWLYIIYEIFVGEASKINASSGNAASQSAFKTIRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTGACTGTCCCTCTGCAGATTATCGAATTTTTCCTGATCCTGGCTGCG---------ATT---ACGGTGGTGCCAGCA---TCGTTG------------------------------------TTTTGGAAA---CTGTTGATTGCCTCGATTGTTATGTTGGTGGGCGGTTATCTTGGCGAA---------GCG------------------GGC------TTT---------------------------------ATT------------------------------------------------------------------GATGTT------------------ACCGTTGGC---TTTGTAATTGGAATGGTCGGTTGGCTCTATATCATCTATGAAATT---------------TTT------GTG---GGCGAAGCGAGTAAGATAAATGCAAGT------AGT---GGCAATGCTGCAAGT---CAA---AGT---GCG---TTT---AAG---ACTATT---CGACTCATCGTGACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILAA---I-TVVPA-SL------------FWK-LLIASIVMLVGGYLGE---A------G--F-----------I----------------------DV------TVG-FVIGMVGWLYIIYEI-----F--V-GEASKINAS--S-GNAAS-Q-S-A-F-K-TI-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-b]_KJ928732 [I-Gamma2-b] PRGD_OTU049_90027c62dbd3e5cfdbfa9ec12be55a73 gb|KJ928732| PRGD_OTU049_90027c62dbd3e5cfdbfa9ec12be55a73, putative proteorhodopsin gene, partial cds. PRGD_OTU049_90027c62dbd3e5cfdbfa9ec12be55a73, putative proteorhodopsin gene, partial cds. KJ928732 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) TTATTGACTGTCCCTCTGCAGATTATCGAATTTTTCCTGATCCTGGCTGCGATTACGGTGGTGCCAGCATCGTTGTTTTGGAAACTGTTGATCGCCTCGATTGTTATGTTGGTGGGTGGTTATCTTGGCGAAGCGGGCTTTATTGATGTTACCGTTGGCTTTGTAATTGGAATGGTCGGTTGGCTCTATATCATCTATGAAATTTTTGTGGGCGAAGCGAGTAAGATAAATGCAAGTAGTGGCAATGCTGCAAGTCAAAGTGCGTTTAAGACTATTCGACTCATCGTGACAATT LLTVPLQIIEFFLILAAITVVPASLFWKLLIASIVMLVGGYLGEAGFIDVTVGFVIGMVGWLYIIYEIFVGEASKINASSGNAASQSAFKTIRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTGACTGTCCCTCTGCAGATTATCGAATTTTTCCTGATCCTGGCTGCG---------ATT---ACGGTGGTGCCAGCA---TCGTTG------------------------------------TTTTGGAAA---CTGTTGATCGCCTCGATTGTTATGTTGGTGGGTGGTTATCTTGGCGAA---------GCG------------------GGC------TTT---------------------------------ATT------------------------------------------------------------------GATGTT------------------ACCGTTGGC---TTTGTAATTGGAATGGTCGGTTGGCTCTATATCATCTATGAAATT---------------TTT------GTG---GGCGAAGCGAGTAAGATAAATGCAAGT------AGT---GGCAATGCTGCAAGT---CAA---AGT---GCG---TTT---AAG---ACTATT---CGACTCATCGTGACAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILAA---I-TVVPA-SL------------FWK-LLIASIVMLVGGYLGE---A------G--F-----------I----------------------DV------TVG-FVIGMVGWLYIIYEI-----F--V-GEASKINAS--S-GNAAS-Q-S-A-F-K-TI-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-b]_KJ928723 [I-Gamma2-b] PRGD_OTU049_3638fd47d5be9f072cd4963130178fe4 gb|KJ928723| PRGD_OTU049_3638fd47d5be9f072cd4963130178fe4, putative proteorhodopsin gene, partial cds. PRGD_OTU049_3638fd47d5be9f072cd4963130178fe4, putative proteorhodopsin gene, partial cds. KJ928723 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTATTGACTGTCCCTCTGCAGATTATCGAATTTTTCCTTATCCTGGCTGCGATTACGGTGGTGCCAGCATCGCTATTTTGGAAGCTGTTGATTGCCTCGATTGTTATGCTGGTGGGGGGTTATCTTGGCGAAGCGGGCTTTATTGATGTCACCGTTGGCTTTGTAATTGGAATGATCGGTTGGCTCTATATCATCTACGAAATTTTCGTGGGCGAAGCGAGCAAGATAAATGCAAATAGTGGTAATGCTGCAAGTCAAAGTGCGTTTAAGACTATTCGACTAATTGTGACGATT LLTVPLQIIEFFLILAAITVVPASLFWKLLIASIVMLVGGYLGEAGFIDVTVGFVIGMIGWLYIIYEIFVGEASKINANSGNAASQSAFKTIRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTGACTGTCCCTCTGCAGATTATCGAATTTTTCCTTATCCTGGCTGCG---------ATT---ACGGTGGTGCCAGCA---TCGCTA------------------------------------TTTTGGAAG---CTGTTGATTGCCTCGATTGTTATGCTGGTGGGGGGTTATCTTGGCGAA---------GCG------------------GGC------TTT---------------------------------ATT------------------------------------------------------------------GATGTC------------------ACCGTTGGC---TTTGTAATTGGAATGATCGGTTGGCTCTATATCATCTACGAAATT---------------TTC------GTG---GGCGAAGCGAGCAAGATAAATGCAAAT------AGT---GGTAATGCTGCAAGT---CAA---AGT---GCG---TTT---AAG---ACTATT---CGACTAATTGTGACGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILAA---I-TVVPA-SL------------FWK-LLIASIVMLVGGYLGE---A------G--F-----------I----------------------DV------TVG-FVIGMIGWLYIIYEI-----F--V-GEASKINAN--S-GNAAS-Q-S-A-F-K-TI-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-b]_KJ928733 [I-Gamma2-b] PRGD_OTU049_bd61c07b1b8e7542814cea6431ff197b gb|KJ928733| PRGD_OTU049_bd61c07b1b8e7542814cea6431ff197b, putative proteorhodopsin gene, partial cds. PRGD_OTU049_bd61c07b1b8e7542814cea6431ff197b, putative proteorhodopsin gene, partial cds. KJ928733 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) TTATTGACTGTCCCTCTGCAGATTATCGAATTTTTCCTGATTCTGGCTGCGATTACGGTGGTGCCAGCATCGCTGTTTTGGAAACTATTGGTTGCCTCGATTGTTATGTTGGTGGGTGGTTATCTTGGCGAAGCGGGCTTTATTGATGTTACCGTTGGCTTTGTAATTGGAATGGTCGGCTGGCTCTATATCATCTATGAAATTTTCGTGGGCGAAGCGAGTAAAATAAATGCAAGTAGTGGTAATGCTGCAAGTCAAAGTGCGTTTAAGACTATTCGACTCATCGTGACGATT LLTVPLQIIEFFLILAAITVVPASLFWKLLVASIVMLVGGYLGEAGFIDVTVGFVIGMVGWLYIIYEIFVGEASKINASSGNAASQSAFKTIRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTGACTGTCCCTCTGCAGATTATCGAATTTTTCCTGATTCTGGCTGCG---------ATT---ACGGTGGTGCCAGCA---TCGCTG------------------------------------TTTTGGAAA---CTATTGGTTGCCTCGATTGTTATGTTGGTGGGTGGTTATCTTGGCGAA---------GCG------------------GGC------TTT---------------------------------ATT------------------------------------------------------------------GATGTT------------------ACCGTTGGC---TTTGTAATTGGAATGGTCGGCTGGCTCTATATCATCTATGAAATT---------------TTC------GTG---GGCGAAGCGAGTAAAATAAATGCAAGT------AGT---GGTAATGCTGCAAGT---CAA---AGT---GCG---TTT---AAG---ACTATT---CGACTCATCGTGACGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILAA---I-TVVPA-SL------------FWK-LLVASIVMLVGGYLGE---A------G--F-----------I----------------------DV------TVG-FVIGMVGWLYIIYEI-----F--V-GEASKINAS--S-GNAAS-Q-S-A-F-K-TI-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-b]_KJ928724 [I-Gamma2-b] PRGD_OTU049_3a12ea8db51626e7c37d97f9b226ce98 gb|KJ928724| PRGD_OTU049_3a12ea8db51626e7c37d97f9b226ce98, putative proteorhodopsin gene, partial cds. PRGD_OTU049_3a12ea8db51626e7c37d97f9b226ce98, putative proteorhodopsin gene, partial cds. KJ928724 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTATTAACTGTCCCCCTGCAGATTATCGAATTTTTCCTTATTTTAGCCGCGATTACTGTGGTGCCCGCATCACTGTTTTGGAAGTTGTTGATTGCCTCAATTGTTATGTTGGTGGGTGGTTATCTTGGCGAAGCAGGCTTTATTGATGTCACCGTTGGATTTGTAATCGGAATGGTGGGTTGGCTTTATATCATCTACGAAATTTTTGTAGGCGAAGCCAGTAAGATAAACGCGAGTAGTGGTAATGCTGCAAGTCAAAGTGCGTTCAAAACGATTCGATTAATTGTGACGATT LLTVPLQIIEFFLILAAITVVPASLFWKLLIASIVMLVGGYLGEAGFIDVTVGFVIGMVGWLYIIYEIFVGEASKINASSGNAASQSAFKTIRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACTGTCCCCCTGCAGATTATCGAATTTTTCCTTATTTTAGCCGCG---------ATT---ACTGTGGTGCCCGCA---TCACTG------------------------------------TTTTGGAAG---TTGTTGATTGCCTCAATTGTTATGTTGGTGGGTGGTTATCTTGGCGAA---------GCA------------------GGC------TTT---------------------------------ATT------------------------------------------------------------------GATGTC------------------ACCGTTGGA---TTTGTAATCGGAATGGTGGGTTGGCTTTATATCATCTACGAAATT---------------TTT------GTA---GGCGAAGCCAGTAAGATAAACGCGAGT------AGT---GGTAATGCTGCAAGT---CAA---AGT---GCG---TTC---AAA---ACGATT---CGATTAATTGTGACGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILAA---I-TVVPA-SL------------FWK-LLIASIVMLVGGYLGE---A------G--F-----------I----------------------DV------TVG-FVIGMVGWLYIIYEI-----F--V-GEASKINAS--S-GNAAS-Q-S-A-F-K-TI-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-b]_KJ928735 [I-Gamma2-b] PRGD_OTU049_e7695f585bef3d9b3e3aedcdfa6c1743 gb|KJ928735| PRGD_OTU049_e7695f585bef3d9b3e3aedcdfa6c1743, putative proteorhodopsin gene, partial cds. PRGD_OTU049_e7695f585bef3d9b3e3aedcdfa6c1743, putative proteorhodopsin gene, partial cds. KJ928735 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTGTTGACCGTTCCTCTTCAGATTATCGAATTTTTCCTTATTTTAGCCGCGATTACTGTGGTGCCCGCATCACTGTTTTGGAAGTTGTTGATTGCCTCAATTGTTATGTTGGTGGGTGGTTATCTTGGCGAAGCAGGCTTTATTGATGTCACCGTTGGATTTGTAATCGGAATGGTGGGTTGGCTTTATATCATCTACGAAATTTTTGTAGGCGAAGCCAGTAAGATAAACGCGAGTAGTGGTAATGCTGCAAGTCAAAGTGCGTTCAAAACGATTCGATTAATTGTGACGATT LLTVPLQIIEFFLILAAITVVPASLFWKLLIASIVMLVGGYLGEAGFIDVTVGFVIGMVGWLYIIYEIFVGEASKINASSGNAASQSAFKTIRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTGACCGTTCCTCTTCAGATTATCGAATTTTTCCTTATTTTAGCCGCG---------ATT---ACTGTGGTGCCCGCA---TCACTG------------------------------------TTTTGGAAG---TTGTTGATTGCCTCAATTGTTATGTTGGTGGGTGGTTATCTTGGCGAA---------GCA------------------GGC------TTT---------------------------------ATT------------------------------------------------------------------GATGTC------------------ACCGTTGGA---TTTGTAATCGGAATGGTGGGTTGGCTTTATATCATCTACGAAATT---------------TTT------GTA---GGCGAAGCCAGTAAGATAAACGCGAGT------AGT---GGTAATGCTGCAAGT---CAA---AGT---GCG---TTC---AAA---ACGATT---CGATTAATTGTGACGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILAA---I-TVVPA-SL------------FWK-LLIASIVMLVGGYLGE---A------G--F-----------I----------------------DV------TVG-FVIGMVGWLYIIYEI-----F--V-GEASKINAS--S-GNAAS-Q-S-A-F-K-TI-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-b]_KJ928727 [I-Gamma2-b] PRGD_OTU049_4178e51d0e5e120288b7de3dfa35af9b gb|KJ928727| PRGD_OTU049_4178e51d0e5e120288b7de3dfa35af9b, putative proteorhodopsin gene, partial cds. PRGD_OTU049_4178e51d0e5e120288b7de3dfa35af9b, putative proteorhodopsin gene, partial cds. KJ928727 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTATTGACCGTTCCTCTTCAGATTATCGAATTTTTCCTTATTCTGGCTGCGATTACTGTGGTGCCCGCATCACTGTTTTGGAAGTTGTTGATTGCCTCAATTGTTATGTTGGTGGGTGGTTATCTTGGCGAAGCGGGCTTTATTGATGTCACCGTTGGATTTGTAATCGGAATGGTGGGATGGCTCTATATCATCTACGAGATTTTTGTAGGTGAAGCCAGTAAGATAAACGCGAGTAGTGGTAATGCTGCAAGTCAAAGTGCGTTCAAAACGATTCGACTAATTGTGACGATT LLTVPLQIIEFFLILAAITVVPASLFWKLLIASIVMLVGGYLGEAGFIDVTVGFVIGMVGWLYIIYEIFVGEASKINASSGNAASQSAFKTIRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTGACCGTTCCTCTTCAGATTATCGAATTTTTCCTTATTCTGGCTGCG---------ATT---ACTGTGGTGCCCGCA---TCACTG------------------------------------TTTTGGAAG---TTGTTGATTGCCTCAATTGTTATGTTGGTGGGTGGTTATCTTGGCGAA---------GCG------------------GGC------TTT---------------------------------ATT------------------------------------------------------------------GATGTC------------------ACCGTTGGA---TTTGTAATCGGAATGGTGGGATGGCTCTATATCATCTACGAGATT---------------TTT------GTA---GGTGAAGCCAGTAAGATAAACGCGAGT------AGT---GGTAATGCTGCAAGT---CAA---AGT---GCG---TTC---AAA---ACGATT---CGACTAATTGTGACGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILAA---I-TVVPA-SL------------FWK-LLIASIVMLVGGYLGE---A------G--F-----------I----------------------DV------TVG-FVIGMVGWLYIIYEI-----F--V-GEASKINAS--S-GNAAS-Q-S-A-F-K-TI-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-b]_KJ928728 [I-Gamma2-b] PRGD_OTU049_5fc55d896850392500f8ba1f05f47071 gb|KJ928728| PRGD_OTU049_5fc55d896850392500f8ba1f05f47071, putative proteorhodopsin gene, partial cds. PRGD_OTU049_5fc55d896850392500f8ba1f05f47071, putative proteorhodopsin gene, partial cds. KJ928728 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175) CTGCTGACCGTTCCGCTGCAAATTATCGAATTTTTCTTGATCTTGGCGGCGATTGCTGTTGTCCCCACCTCCTTGTTCTGGAAATTACTGGTCGCATCTGTCGTAATGTTAGTTGGCGGATATATGGGTGAGGCTGGATTCATAAACGTCACCGTTGGTTTCATAATTGGAATGATTGGCTGGCTCTACATTATCTACGAAATTTTCGCCGGAGAAGCCAGCAAAATTAACGCCAGCAGCGGAAACGTTAACAGTCAAATGGCGTTTAAAACGATTAGGCTCATCGTAACTATC LLTVPLQIIEFFLILAAIAVVPTSLFWKLLVASVVMLVGGYMGEAGFINVTVGFIIGMIGWLYIIYEIFAGEASKINASSGNVNSQMAFKTIRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTGACCGTTCCGCTGCAAATTATCGAATTTTTCTTGATCTTGGCGGCG---------ATT---GCTGTTGTCCCCACC---TCCTTG------------------------------------TTCTGGAAA---TTACTGGTCGCATCTGTCGTAATGTTAGTTGGCGGATATATGGGTGAG---------GCT------------------GGA------TTC---------------------------------ATA------------------------------------------------------------------AACGTC------------------ACCGTTGGT---TTCATAATTGGAATGATTGGCTGGCTCTACATTATCTACGAAATT---------------TTC------GCC---GGAGAAGCCAGCAAAATTAACGCCAGC------AGC---GGAAACGTTAACAGT---CAA---ATG---GCG---TTT---AAA---ACGATT---AGGCTCATCGTAACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILAA---I-AVVPT-SL------------FWK-LLVASVVMLVGGYMGE---A------G--F-----------I----------------------NV------TVG-FIIGMIGWLYIIYEI-----F--A-GEASKINAS--S-GNVNS-Q-M-A-F-K-TI-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-b]_KJ928730 [I-Gamma2-b] PRGD_OTU049_7b383c4dd8b1020f880addffd9e8ce8b gb|KJ928730| PRGD_OTU049_7b383c4dd8b1020f880addffd9e8ce8b, putative proteorhodopsin gene, partial cds. PRGD_OTU049_7b383c4dd8b1020f880addffd9e8ce8b, putative proteorhodopsin gene, partial cds. KJ928730 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTGCTGACCGTTCCGCTGCAAATTATCGAATTTTTCTTAATCTTGGCGGCGATTGCTGTTGTCCCCACCTCCTTGTTCTGGAAATTACTGGTCGCCTCCGTCGTAATGTTAGTTGGCGGCTATATGGGTGAGGCTGGATTCATAAATGTCACCGTTGGTTTCATAATCGGAATGATCGGCTGGCTCTACATTATCTACGAGATTTTTGCCGGCGAAGCCAGCAAAATTAACGCGAGCAGCGGAAACGTTAACAGTCAAATGGCGTTTAAAACGATTAGGCTCATCGTAACTATC LLTVPLQIIEFFLILAAIAVVPTSLFWKLLVASVVMLVGGYMGEAGFINVTVGFIIGMIGWLYIIYEIFAGEASKINASSGNVNSQMAFKTIRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTGACCGTTCCGCTGCAAATTATCGAATTTTTCTTAATCTTGGCGGCG---------ATT---GCTGTTGTCCCCACC---TCCTTG------------------------------------TTCTGGAAA---TTACTGGTCGCCTCCGTCGTAATGTTAGTTGGCGGCTATATGGGTGAG---------GCT------------------GGA------TTC---------------------------------ATA------------------------------------------------------------------AATGTC------------------ACCGTTGGT---TTCATAATCGGAATGATCGGCTGGCTCTACATTATCTACGAGATT---------------TTT------GCC---GGCGAAGCCAGCAAAATTAACGCGAGC------AGC---GGAAACGTTAACAGT---CAA---ATG---GCG---TTT---AAA---ACGATT---AGGCTCATCGTAACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILAA---I-AVVPT-SL------------FWK-LLVASVVMLVGGYMGE---A------G--F-----------I----------------------NV------TVG-FIIGMIGWLYIIYEI-----F--A-GEASKINAS--S-GNVNS-Q-M-A-F-K-TI-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-b]_KJ928721 [I-Gamma2-b] PRGD_OTU049_07a60fad2768fc4b3d24d1b2f7db526d gb|KJ928721| PRGD_OTU049_07a60fad2768fc4b3d24d1b2f7db526d, putative proteorhodopsin gene, partial cds. PRGD_OTU049_07a60fad2768fc4b3d24d1b2f7db526d, putative proteorhodopsin gene, partial cds. KJ928721 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGCTGACCGTCCCGCTGCAAATCATCGAATTTTTCTTGATCTTGGCGGCGATTGCTGTTGTCCCCACCTCCTTGTTCTGGAAATTACTAGTCGCCTCTGTCGTGATGTTAGTTGGCGGCTATATGGGTGAGGCTGGATTCATAAATGTCACCGTTGGTTTCATAATTGGAATGATCGGCTGGCTCTACATTATTTACGAAATTTTCGCCGGCGAAGCCAGCAAAATTAACGCGAGCAGCGGAAACGTTAATAGTCAAATGGCGTTTAAAACGATTAGGCTTATCGTAACTATC LLTVPLQIIEFFLILAAIAVVPTSLFWKLLVASVVMLVGGYMGEAGFINVTVGFIIGMIGWLYIIYEIFAGEASKINASSGNVNSQMAFKTIRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTGACCGTCCCGCTGCAAATCATCGAATTTTTCTTGATCTTGGCGGCG---------ATT---GCTGTTGTCCCCACC---TCCTTG------------------------------------TTCTGGAAA---TTACTAGTCGCCTCTGTCGTGATGTTAGTTGGCGGCTATATGGGTGAG---------GCT------------------GGA------TTC---------------------------------ATA------------------------------------------------------------------AATGTC------------------ACCGTTGGT---TTCATAATTGGAATGATCGGCTGGCTCTACATTATTTACGAAATT---------------TTC------GCC---GGCGAAGCCAGCAAAATTAACGCGAGC------AGC---GGAAACGTTAATAGT---CAA---ATG---GCG---TTT---AAA---ACGATT---AGGCTTATCGTAACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILAA---I-AVVPT-SL------------FWK-LLVASVVMLVGGYMGE---A------G--F-----------I----------------------NV------TVG-FIIGMIGWLYIIYEI-----F--A-GEASKINAS--S-GNVNS-Q-M-A-F-K-TI-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-b]_KJ928722 [I-Gamma2-b] PRGD_OTU049_15908ac02a2bf0fb072adda728b1564e gb|KJ928722| PRGD_OTU049_15908ac02a2bf0fb072adda728b1564e, putative proteorhodopsin gene, partial cds. PRGD_OTU049_15908ac02a2bf0fb072adda728b1564e, putative proteorhodopsin gene, partial cds. KJ928722 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTGCTGACCGTTCCGCTGCAAATCATCGAATTTTTCTTGATCTTGGCGGCGATTGCTGTTGTCCCCACCTCCTTGTTCTGGAAATTATTAGTCGCCTCTGTCGTAATGTTAGTTGGCGGCTATATGGGTGAGGCTGGATTCATAAATGTCACCGTTGGTTTCATAATTGGAATGATCGGCTGGCTCTACATTATCTATGAAATTTTCGCCGGCGAAGCCAGCAAAATTAACGCGAGCAGCGGAAACGTTAACAGTCAAATGGCGTTTAAAACGATTAGGCTCATCGTAACCATC LLTVPLQIIEFFLILAAIAVVPTSLFWKLLVASVVMLVGGYMGEAGFINVTVGFIIGMIGWLYIIYEIFAGEASKINASSGNVNSQMAFKTIRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTGACCGTTCCGCTGCAAATCATCGAATTTTTCTTGATCTTGGCGGCG---------ATT---GCTGTTGTCCCCACC---TCCTTG------------------------------------TTCTGGAAA---TTATTAGTCGCCTCTGTCGTAATGTTAGTTGGCGGCTATATGGGTGAG---------GCT------------------GGA------TTC---------------------------------ATA------------------------------------------------------------------AATGTC------------------ACCGTTGGT---TTCATAATTGGAATGATCGGCTGGCTCTACATTATCTATGAAATT---------------TTC------GCC---GGCGAAGCCAGCAAAATTAACGCGAGC------AGC---GGAAACGTTAACAGT---CAA---ATG---GCG---TTT---AAA---ACGATT---AGGCTCATCGTAACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILAA---I-AVVPT-SL------------FWK-LLVASVVMLVGGYMGE---A------G--F-----------I----------------------NV------TVG-FIIGMIGWLYIIYEI-----F--A-GEASKINAS--S-GNVNS-Q-M-A-F-K-TI-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-b]_KJ928725 [I-Gamma2-b] PRGD_OTU049_3b5b2dd5f1e49998e98e49aeb3ecbe6c gb|KJ928725| PRGD_OTU049_3b5b2dd5f1e49998e98e49aeb3ecbe6c, putative proteorhodopsin gene, partial cds. PRGD_OTU049_3b5b2dd5f1e49998e98e49aeb3ecbe6c, putative proteorhodopsin gene, partial cds. KJ928725 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGCTGACCGTCCCTCTGCAGATCATCGAGTTCTTCCTCATCTTGGCAGCGATTACCGTGGTCCCCACCTCGCTCTTCTGGAAATTGCTGGTTGCCTCGATCGTAATGTTGGTTGGCGGCTACATGGGCGAAGCAGGCTTCATAGATATCACAGTTGGATTCATCATTGGAATGATCGGTTGGCTTTACATCATCTATGAAATCTTCATTGGCGAAGCCAGTAAAATTAACGCGAACAGCGCGAATGTCGCCAGTCAGAGCGCGTTCAAGACCATTCGGCTTATTGTCACGGTC LLTVPLQIIEFFLILAAITVVPTSLFWKLLVASIVMLVGGYMGEAGFIDITVGFIIGMIGWLYIIYEIFIGEASKINANSANVASQSAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTGACCGTCCCTCTGCAGATCATCGAGTTCTTCCTCATCTTGGCAGCG---------ATT---ACCGTGGTCCCCACC---TCGCTC------------------------------------TTCTGGAAA---TTGCTGGTTGCCTCGATCGTAATGTTGGTTGGCGGCTACATGGGCGAA---------GCA------------------GGC------TTC---------------------------------ATA------------------------------------------------------------------GATATC------------------ACAGTTGGA---TTCATCATTGGAATGATCGGTTGGCTTTACATCATCTATGAAATC---------------TTC------ATT---GGCGAAGCCAGTAAAATTAACGCGAAC------AGC---GCGAATGTCGCCAGT---CAG---AGC---GCG---TTC---AAG---ACCATT---CGGCTTATTGTCACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILAA---I-TVVPT-SL------------FWK-LLVASIVMLVGGYMGE---A------G--F-----------I----------------------DI------TVG-FIIGMIGWLYIIYEI-----F--I-GEASKINAN--S-ANVAS-Q-S-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-b]_KJ928737 [I-Gamma2-b] PRGD_OTU049_f0529a7be4a9810a60af4415af206cb6 gb|KJ928737| PRGD_OTU049_f0529a7be4a9810a60af4415af206cb6, putative proteorhodopsin gene, partial cds. PRGD_OTU049_f0529a7be4a9810a60af4415af206cb6, putative proteorhodopsin gene, partial cds. KJ928737 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGCTGACCGTTCCGCTGCAGATCATCGAGTTCTTCCTCATCTTGGCAGCGATTACCGTGGTCCCCGCCTCGCTATTCTGGAAATTGCTGGTCGCCTCGATCGTAATGTTGGTTGGCGGCTACATGGGCGAAGCAGGGTTCATAGATATCACAGTTGGATTCATCATTGGAATGATCGGATGGCTTTACATCATCTATGAAATCTTCATTGGCGAAGCCAGTAAAATTAACGCGAACAGCGCGAATGTCGCCAGTCAGAGCGCATTCAAGACCATTAGGCTTATTGTCACCGTC LLTVPLQIIEFFLILAAITVVPASLFWKLLVASIVMLVGGYMGEAGFIDITVGFIIGMIGWLYIIYEIFIGEASKINANSANVASQSAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTGACCGTTCCGCTGCAGATCATCGAGTTCTTCCTCATCTTGGCAGCG---------ATT---ACCGTGGTCCCCGCC---TCGCTA------------------------------------TTCTGGAAA---TTGCTGGTCGCCTCGATCGTAATGTTGGTTGGCGGCTACATGGGCGAA---------GCA------------------GGG------TTC---------------------------------ATA------------------------------------------------------------------GATATC------------------ACAGTTGGA---TTCATCATTGGAATGATCGGATGGCTTTACATCATCTATGAAATC---------------TTC------ATT---GGCGAAGCCAGTAAAATTAACGCGAAC------AGC---GCGAATGTCGCCAGT---CAG---AGC---GCA---TTC---AAG---ACCATT---AGGCTTATTGTCACCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILAA---I-TVVPA-SL------------FWK-LLVASIVMLVGGYMGE---A------G--F-----------I----------------------DI------TVG-FIIGMIGWLYIIYEI-----F--I-GEASKINAN--S-ANVAS-Q-S-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-b]_KJ928734 [I-Gamma2-b] PRGD_OTU049_c920d0cbd44bb3fd44d89957511a3bcc gb|KJ928734| PRGD_OTU049_c920d0cbd44bb3fd44d89957511a3bcc, putative proteorhodopsin gene, partial cds. PRGD_OTU049_c920d0cbd44bb3fd44d89957511a3bcc, putative proteorhodopsin gene, partial cds. KJ928734 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGCTGACCGTCCCTCTGCAGATCATCGAGTTCTTCCTCATCTTGGCCGCGATTACCGTGGTCCCCACCTCGCTCTTCTGGAAATTGCTGGTCGCCTCGATCGTAATGTTGGTTGGCGGCTACATGGGCGAAGCAGGCTTCATAGATATCACAGTTGGATTCATCATTGGAATGATCGGCTGGCTTTACATCATCTATGAAATCTTCATTGGCGAAGCCAGTAAAATTAACGCGAACAGCGCGAATGTCGCCAGTCAGAGCGCGTTTAAGACCATTCGGCTTATTGTCACGGTC LLTVPLQIIEFFLILAAITVVPTSLFWKLLVASIVMLVGGYMGEAGFIDITVGFIIGMIGWLYIIYEIFIGEASKINANSANVASQSAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTGACCGTCCCTCTGCAGATCATCGAGTTCTTCCTCATCTTGGCCGCG---------ATT---ACCGTGGTCCCCACC---TCGCTC------------------------------------TTCTGGAAA---TTGCTGGTCGCCTCGATCGTAATGTTGGTTGGCGGCTACATGGGCGAA---------GCA------------------GGC------TTC---------------------------------ATA------------------------------------------------------------------GATATC------------------ACAGTTGGA---TTCATCATTGGAATGATCGGCTGGCTTTACATCATCTATGAAATC---------------TTC------ATT---GGCGAAGCCAGTAAAATTAACGCGAAC------AGC---GCGAATGTCGCCAGT---CAG---AGC---GCG---TTT---AAG---ACCATT---CGGCTTATTGTCACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILAA---I-TVVPT-SL------------FWK-LLVASIVMLVGGYMGE---A------G--F-----------I----------------------DI------TVG-FIIGMIGWLYIIYEI-----F--I-GEASKINAN--S-ANVAS-Q-S-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-b]_KJ928736 [I-Gamma2-b] PRGD_OTU049_e8d0a01976935653067bc7d91e91a1b8 gb|KJ928736| PRGD_OTU049_e8d0a01976935653067bc7d91e91a1b8, putative proteorhodopsin gene, partial cds. PRGD_OTU049_e8d0a01976935653067bc7d91e91a1b8, putative proteorhodopsin gene, partial cds. KJ928736 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -33.28, 45.35) TTACTGACGGTCCCGCTTCAGATCATCGAATTTTTCCTCATCCTCGCAGCTATTACGGTTGTCCCTACTTCCCTTTTCTGGAAATTGCTGGTCGCTTCTGTCGTTATGTTGGTTGGCGGCTACATGGGCGAGGCCGGATTCATGGATATTACGCTGGGATTCGTAATCGGAATGATCGGTTGGCTTTACATCATTTATGAGATCTTCATCGGTGAGGCCAGCAAGATTAATGCAAATAGCGCAAATGCGGCCAGTCAGAGTGCGTTTAAGACAATTCGTCTTATCGTCACGGTC LLTVPLQIIEFFLILAAITVVPTSLFWKLLVASVVMLVGGYMGEAGFMDITLGFVIGMIGWLYIIYEIFIGEASKINANSANAASQSAFKTIRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTGACGGTCCCGCTTCAGATCATCGAATTTTTCCTCATCCTCGCAGCT---------ATT---ACGGTTGTCCCTACT---TCCCTT------------------------------------TTCTGGAAA---TTGCTGGTCGCTTCTGTCGTTATGTTGGTTGGCGGCTACATGGGCGAG---------GCC------------------GGA------TTC---------------------------------ATG------------------------------------------------------------------GATATT------------------ACGCTGGGA---TTCGTAATCGGAATGATCGGTTGGCTTTACATCATTTATGAGATC---------------TTC------ATC---GGTGAGGCCAGCAAGATTAATGCAAAT------AGC---GCAAATGCGGCCAGT---CAG---AGT---GCG---TTT---AAG---ACAATT---CGTCTTATCGTCACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFFLILAA---I-TVVPT-SL------------FWK-LLVASVVMLVGGYMGE---A------G--F-----------M----------------------DI------TLG-FVIGMIGWLYIIYEI-----F--I-GEASKINAN--S-ANAAS-Q-S-A-F-K-TI-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-b]_KJ929364 [I-Gamma2-b] PRGD_OTU111_84d458ba3da40e8365abfe949070dce7 gb|KJ929364| PRGD_OTU111_84d458ba3da40e8365abfe949070dce7, putative proteorhodopsin gene, partial cds. PRGD_OTU111_84d458ba3da40e8365abfe949070dce7, putative proteorhodopsin gene, partial cds. KJ929364 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTCATAACGGTTCCTCTTCAGATTGTTGAATTCTACCTTATCCTATCAGCAAACCAGAGAGTCTCTTTGTACCTGTTCTGGCGCTTACTAATAGCGAGTATCGCTATGCTTGTATTTGGTTACATAGGAGAAACTGGACTTGGGGATGTTATGATCTTTTTCGGTCTAGGTATGGCAGGCTGGCTGATCATCCTTTATGAAATTTTCTTAGGCGAAGCATCAAAGATAAGTCAAAACCTCCAAAGTGCGTCGACAAAGCTTGCTTTTTCAGCGCTAAGACTTATTGTGACGGTT FITVPLQIVEFYLILSANQRVSLYLFWRLLIASIAMLVFGYIGETGLGDVMIFFGLGMAGWLIILYEIFLGEASKISQNLQSASTKLAFSALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCATAACGGTTCCTCTTCAGATTGTTGAATTCTACCTTATCCTATCAGCA---------AAC---CAGAGAGTCTCTTTG---TACCTG------------------------------------TTCTGGCGC---TTACTAATAGCGAGTATCGCTATGCTTGTATTTGGTTACATAGGAGAA---------ACT------------------GGA------CTT---------------------------------GGG------------------------------------------------------------------GATGTT------------------ATGATCTTT---TTCGGTCTAGGTATGGCAGGCTGGCTGATCATCCTTTATGAAATT---------------TTC------TTA---GGCGAAGCATCAAAGATAAGTCAAAAC------CTC---CAAAGTGCGTCGACA---AAG---CTT---GCT---TTT---TCA---GCGCTA---AGACTTATTGTGACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIVEFYLILSA---N-QRVSL-YL------------FWR-LLIASIAMLVFGYIGE---T------G--L-----------G----------------------DV------MIF-FGLGMAGWLIILYEI-----F--L-GEASKISQN--L-QSAST-K-L-A-F-S-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-b]_KJ929366 [I-Gamma2-b] PRGD_OTU111_debc1e459a079d44fc5b96ead4673bff gb|KJ929366| PRGD_OTU111_debc1e459a079d44fc5b96ead4673bff, putative proteorhodopsin gene, partial cds. PRGD_OTU111_debc1e459a079d44fc5b96ead4673bff, putative proteorhodopsin gene, partial cds. KJ929366 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-33.28, 45.35) TTCATAACGGTCCCTCTTCAGATCGTTGAGTTCTACCTTATCCTATCAGCAAACCAGATGGTCTCCTTATACCTGTTCTGGCGCCTACTAATAGCGAGTATCGCTATGCTTGTATTTGGTTACATTGGGGAAACTGGACTTGGGGATGTTATGATCTTTTTCGGTCTAGGTATGGCAGGCTGGCTGATCATCCTTTATGAAATCTTCCTAGGCGAAGCGTCAAAGATAAGTCAAAACCTCCAAAGTGCGTCCACAAAGCTTGCTTTTTCAGCGCTAAGACTCATCGTGACGGTT FITVPLQIVEFYLILSANQMVSLYLFWRLLIASIAMLVFGYIGETGLGDVMIFFGLGMAGWLIILYEIFLGEASKISQNLQSASTKLAFSALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCATAACGGTCCCTCTTCAGATCGTTGAGTTCTACCTTATCCTATCAGCA---------AAC---CAGATGGTCTCCTTA---TACCTG------------------------------------TTCTGGCGC---CTACTAATAGCGAGTATCGCTATGCTTGTATTTGGTTACATTGGGGAA---------ACT------------------GGA------CTT---------------------------------GGG------------------------------------------------------------------GATGTT------------------ATGATCTTT---TTCGGTCTAGGTATGGCAGGCTGGCTGATCATCCTTTATGAAATC---------------TTC------CTA---GGCGAAGCGTCAAAGATAAGTCAAAAC------CTC---CAAAGTGCGTCCACA---AAG---CTT---GCT---TTT---TCA---GCGCTA---AGACTCATCGTGACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIVEFYLILSA---N-QMVSL-YL------------FWR-LLIASIAMLVFGYIGE---T------G--L-----------G----------------------DV------MIF-FGLGMAGWLIILYEI-----F--L-GEASKISQN--L-QSAST-K-L-A-F-S-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-b]_KJ929365 [I-Gamma2-b] PRGD_OTU111_8c6022da40b371948095e3662d86f797 gb|KJ929365| PRGD_OTU111_8c6022da40b371948095e3662d86f797, putative proteorhodopsin gene, partial cds. PRGD_OTU111_8c6022da40b371948095e3662d86f797, putative proteorhodopsin gene, partial cds. KJ929365 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) TTCATAACGGTCCCACTTCAGATCGTTGAGTTCTACCTCATCCTATCAGCAAGCCAGATGGTCTCCTTGTACCTGTTCTGGCGTCTACTAATAGCGAGTATCGCTATGCTTGTATTCGGCTACATTGGAGAAACTGGACTTGGGGATGTCATGATCTTTTTCGGTCTAGGTATGGCAGGCTGGCTGATCATCCTTTATGAAATTTTCTTAGGCGAAGCGTCAAAGATAAGTCAAAACCTTCAAAGTGCATCGACAAAACTAGCTTTTTCAGCGCTAAGACTCATCGTGACGGTT FITVPLQIVEFYLILSASQMVSLYLFWRLLIASIAMLVFGYIGETGLGDVMIFFGLGMAGWLIILYEIFLGEASKISQNLQSASTKLAFSALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCATAACGGTCCCACTTCAGATCGTTGAGTTCTACCTCATCCTATCAGCA---------AGC---CAGATGGTCTCCTTG---TACCTG------------------------------------TTCTGGCGT---CTACTAATAGCGAGTATCGCTATGCTTGTATTCGGCTACATTGGAGAA---------ACT------------------GGA------CTT---------------------------------GGG------------------------------------------------------------------GATGTC------------------ATGATCTTT---TTCGGTCTAGGTATGGCAGGCTGGCTGATCATCCTTTATGAAATT---------------TTC------TTA---GGCGAAGCGTCAAAGATAAGTCAAAAC------CTT---CAAAGTGCATCGACA---AAA---CTA---GCT---TTT---TCA---GCGCTA---AGACTCATCGTGACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIVEFYLILSA---S-QMVSL-YL------------FWR-LLIASIAMLVFGYIGE---T------G--L-----------G----------------------DV------MIF-FGLGMAGWLIILYEI-----F--L-GEASKISQN--L-QSAST-K-L-A-F-S-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-b]_KJ929367 [I-Gamma2-b] PRGD_OTU111_ffcd915716d9897f1cc3ba892709c671 gb|KJ929367| PRGD_OTU111_ffcd915716d9897f1cc3ba892709c671, putative proteorhodopsin gene, partial cds. PRGD_OTU111_ffcd915716d9897f1cc3ba892709c671, putative proteorhodopsin gene, partial cds. KJ929367 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Pacific side (69.5142, -133.4185) TTCATAACGGTCCCACTTCAGATCGTTGAGTTCTACCTCATCCTATCAGCAAGCCAGATGGTCTCCTTGTACCTGTTCTGGCGTCTACTAATAGCGAGTATCGCGATGCTTGTATTTGGTTACATTGGAGAAACTGGACTTGGGGATGTCATGATCTTTTTCGGTCTAGGTATGGCAGGCTGGCTGATCATCCTTTATGAAATTTTCTTAGGCGAAGCGTCAAAGATAAGTCAAAACCTTCAAAGTGCATCGACAAAACTTGCTTTTTCAGCGCTAAGACTCATCGTGACGGTT FITVPLQIVEFYLILSASQMVSLYLFWRLLIASIAMLVFGYIGETGLGDVMIFFGLGMAGWLIILYEIFLGEASKISQNLQSASTKLAFSALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCATAACGGTCCCACTTCAGATCGTTGAGTTCTACCTCATCCTATCAGCA---------AGC---CAGATGGTCTCCTTG---TACCTG------------------------------------TTCTGGCGT---CTACTAATAGCGAGTATCGCGATGCTTGTATTTGGTTACATTGGAGAA---------ACT------------------GGA------CTT---------------------------------GGG------------------------------------------------------------------GATGTC------------------ATGATCTTT---TTCGGTCTAGGTATGGCAGGCTGGCTGATCATCCTTTATGAAATT---------------TTC------TTA---GGCGAAGCGTCAAAGATAAGTCAAAAC------CTT---CAAAGTGCATCGACA---AAA---CTT---GCT---TTT---TCA---GCGCTA---AGACTCATCGTGACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIVEFYLILSA---S-QMVSL-YL------------FWR-LLIASIAMLVFGYIGE---T------G--L-----------G----------------------DV------MIF-FGLGMAGWLIILYEI-----F--L-GEASKISQN--L-QSAST-K-L-A-F-S-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-b]_KJ929362 [I-Gamma2-b] PRGD_OTU111_otuREP_288f75e592a6492d2b7ef0304412af76 gb|KJ929362| PRGD_OTU111_otuREP_288f75e592a6492d2b7ef0304412af76, putative proteorhodopsin gene, partial cds. PRGD_OTU111_otuREP_288f75e592a6492d2b7ef0304412af76, putative proteorhodopsin gene, partial cds. KJ929362 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), Arctic Ocean-Pacific side (69.5142, -133.4185), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTCATAACGGTCCCTCTTCAGATTATTGAGTTCTACCTAATTCTATCAGCAAACCAGATTGTCTCCTTGTACCTGTTCTGGCGCCTACTAATAGCGAGTATCGCTATGCTTGTATTTGGTTACATTGGAGAAACAGGGCTAGGGGATGTCATGATCTTTTTCGGTCTAGGTATGGCAGGCTGGCTGATCATCCTTTATGAAATTTTCTTAGGCGAAGCGTCAAAGATAAGTCAAAACCTCCAAAGTGCATCGACAAAACTTGCTTTTTCAGCCTTAAGACTCATCGTGACGGTT FITVPLQIIEFYLILSANQIVSLYLFWRLLIASIAMLVFGYIGETGLGDVMIFFGLGMAGWLIILYEIFLGEASKISQNLQSASTKLAFSALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCATAACGGTCCCTCTTCAGATTATTGAGTTCTACCTAATTCTATCAGCA---------AAC---CAGATTGTCTCCTTG---TACCTG------------------------------------TTCTGGCGC---CTACTAATAGCGAGTATCGCTATGCTTGTATTTGGTTACATTGGAGAA---------ACA------------------GGG------CTA---------------------------------GGG------------------------------------------------------------------GATGTC------------------ATGATCTTT---TTCGGTCTAGGTATGGCAGGCTGGCTGATCATCCTTTATGAAATT---------------TTC------TTA---GGCGAAGCGTCAAAGATAAGTCAAAAC------CTC---CAAAGTGCATCGACA---AAA---CTT---GCT---TTT---TCA---GCCTTA---AGACTCATCGTGACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIIEFYLILSA---N-QIVSL-YL------------FWR-LLIASIAMLVFGYIGE---T------G--L-----------G----------------------DV------MIF-FGLGMAGWLIILYEI-----F--L-GEASKISQN--L-QSAST-K-L-A-F-S-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-b]_KJ929363 [I-Gamma2-b] PRGD_OTU111_78de4a0bdf820e9b57e8ae25622b247b gb|KJ929363| PRGD_OTU111_78de4a0bdf820e9b57e8ae25622b247b, putative proteorhodopsin gene, partial cds. PRGD_OTU111_78de4a0bdf820e9b57e8ae25622b247b, putative proteorhodopsin gene, partial cds. KJ929363 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTCATAACGGTCCCTCTTCAGATTATTGAGTTCTACCTAATTCTATCAGCAAGCCAGATGGTCTCCTTATACCTGTTCTGGCGCCTACTAATAGCGAGTATCGCTATGCTTGTATTTGGTTACATTGGAGAAACTGGGCTAGGGGATGTCATGATCTTTTTCGGTCTAGGTATGGCAGGCTGGCTGATCATCCTTTATGAAATTTTCTTAGGCGAAGCGTCAAAGATAAGTCAAAACCTTCAAAGTGCATCGACAAAACTTGCTTTTTCAGCGCTAAGACTCATCGTGACGGTT FITVPLQIIEFYLILSASQMVSLYLFWRLLIASIAMLVFGYIGETGLGDVMIFFGLGMAGWLIILYEIFLGEASKISQNLQSASTKLAFSALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCATAACGGTCCCTCTTCAGATTATTGAGTTCTACCTAATTCTATCAGCA---------AGC---CAGATGGTCTCCTTA---TACCTG------------------------------------TTCTGGCGC---CTACTAATAGCGAGTATCGCTATGCTTGTATTTGGTTACATTGGAGAA---------ACT------------------GGG------CTA---------------------------------GGG------------------------------------------------------------------GATGTC------------------ATGATCTTT---TTCGGTCTAGGTATGGCAGGCTGGCTGATCATCCTTTATGAAATT---------------TTC------TTA---GGCGAAGCGTCAAAGATAAGTCAAAAC------CTT---CAAAGTGCATCGACA---AAA---CTT---GCT---TTT---TCA---GCGCTA---AGACTCATCGTGACGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIIEFYLILSA---S-QMVSL-YL------------FWR-LLIASIAMLVFGYIGE---T------G--L-----------G----------------------DV------MIF-FGLGMAGWLIILYEI-----F--L-GEASKISQN--L-QSAST-K-L-A-F-S-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-b]_KJ929859 [I-Gamma2-b] PRGD_OTU310_otuREP_c31d1b2f458da923a7d8bbbcea507184 gb|KJ929859| PRGD_OTU310_otuREP_c31d1b2f458da923a7d8bbbcea507184, putative proteorhodopsin gene, partial cds. PRGD_OTU310_otuREP_c31d1b2f458da923a7d8bbbcea507184, putative proteorhodopsin gene, partial cds. KJ929859 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTGATAACTGTACCGCTGCAGATTGTTGAGTTCTATCTGATTCTTGCGGCTGTTACAGTCGTTTCAAGGTCTCTGTTCTGGAAGTTGCTGGGCGCGTCTATTGTAATGCTAGTCGCTGGTTTTCTAGGTGAGGCAGAGATGATGTCAAGGATGCCTGCATTTCTTATAGGAATGCTAGGGTGGTTTGGTGTCCTCTATCTGATCTTCATGGGAGAGGCCGCCAATGTCAATACGGCAAGCGGAAATAAGTCAGGTCAAATGGCTTTTAACGCACTGAGAATGATCGTTTTGGTT LITVPLQIVEFYLILAAVTVVSRSLFWKLLGASIVMLVAGFLGEAEMMSRMPAFLIGMLGWFGVLYLIFMGEAANVNTASGNKSGQMAFNALRMIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATAACTGTACCGCTGCAGATTGTTGAGTTCTATCTGATTCTTGCGGCT---------GTT---ACAGTCGTTTCAAGG---TCTCTG------------------------------------TTCTGGAAG---TTGCTGGGCGCGTCTATTGTAATGCTAGTCGCTGGTTTTCTAGGTGAG---------GCA------------------GAG------ATG---------------------------------ATG------------------------------------------------------------------TCAAGG------------------ATGCCTGCA---TTTCTTATAGGAATGCTAGGGTGGTTTGGTGTCCTCTATCTGATC---------------TTC------ATG---GGAGAGGCCGCCAATGTCAATACGGCA------AGC---GGAAATAAGTCAGGT---CAA---ATG---GCT---TTT---AAC---GCACTG---AGAATGATCGTTTTGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TVVSR-SL------------FWK-LLGASIVMLVAGFLGE---A------E--M-----------M----------------------SR------MPA-FLIGMLGWFGVLYLI-----F--M-GEAANVNTA--S-GNKSG-Q-M-A-F-N-AL-RMIVLV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-b]_KJ929782 [I-Gamma2-b] PRGD_OTU243a_otuREP_d5e4e8da5360b919eb8e684370512b16 gb|KJ929782| PRGD_OTU243a_otuREP_d5e4e8da5360b919eb8e684370512b16, putative proteorhodopsin gene, partial cds. PRGD_OTU243a_otuREP_d5e4e8da5360b919eb8e684370512b16, putative proteorhodopsin gene, partial cds. KJ929782 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTATTAACAGTGCCGCTCCAGATTGTGGAGTTTTATTTGATCTTGTCAGCTATAGCGGTAGTTGCAGGTGCATTATTCTGGAGACTTATGGTCGCATCGGTGTTGATGTTGGTCTTTGGTTATATGGGTGAAACCGGTGCAATGAACATGTTTTTTGGATGGTTTTTAGGGATGCTTGGTTGGCTATACATTTTGTATGAGATCCACAAAGGCGAGGCTGCCGAGATTAATGCGGCTGAGGGGACGGAGGCATCCCAGTTTGCTTTTGATGCTATAAAATGGATAGTAACGGTA LLTVPLQIVEFYLILSAIAVVAGALFWRLMVASVLMLVFGYMGETGAMNMFFGWFLGMLGWLYILYEIHKGEAAEINAAEGTEASQFAFDAIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACAGTGCCGCTCCAGATTGTGGAGTTTTATTTGATCTTGTCAGCT---------ATA---GCGGTAGTTGCAGGT---GCATTA------------------------------------TTCTGGAGA---CTTATGGTCGCATCGGTGTTGATGTTGGTCTTTGGTTATATGGGTGAA---------ACC------------------GGT------GCA---------------------------------ATG------------------------------------------------------------------AACATG------------------TTTTTTGGA---TGGTTTTTAGGGATGCTTGGTTGGCTATACATTTTGTATGAGATC---------------CAC------AAA---GGCGAGGCTGCCGAGATTAATGCGGCT------GAG---GGGACGGAGGCATCC---CAG---TTT---GCT---TTT---GAT---GCTATA---AAATGGATAGTAACGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILSA---I-AVVAG-AL------------FWR-LMVASVLMLVFGYMGE---T------G--A-----------M----------------------NM------FFG-WFLGMLGWLYILYEI-----H--K-GEAAEINAA--E-GTEAS-Q-F-A-F-D-AI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ929783 [I-Gamma2-a] PRGD_OTU243b_otuREP_e5a649a35629012438c48eb241754c09 gb|KJ929783| PRGD_OTU243b_otuREP_e5a649a35629012438c48eb241754c09, putative proteorhodopsin gene, partial cds. PRGD_OTU243b_otuREP_e5a649a35629012438c48eb241754c09, putative proteorhodopsin gene, partial cds. KJ929783 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/A subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (33.762, 29.175), Indian Ocean (-14.48, 113.45) TTATTAACAGTGCCGCTCCAAATTGTGGAGTTTTATTTGATCTTGTCAGCTATAGCCGTAGTTGCAGGTGCATTATTCTGGAGACTTATGGTCGCATCAGTGTTGATGTTGGTCTTTGGTTATATGGGTGAAACCGGTGCAATGAACATGTTTTTTGGATGGTTCCTCGGGATGCTTGGTTGGCTATATATTTTGTATGAGATCCACAAAGGTGAGGCTGCTGAGATTAATGCGGCTGAAGGGACGGAGGCATCCCAGTTTGCTTTTGATGCGATAAAATGGATAGTAACAGTG LLTVPLQIVEFYLILSAIAVVAGALFWRLMVASVLMLVFGYMGETGAMNMFFGWFLGMLGWLYILYEIHKGEAAEINAAEGTEASQFAFDAIKWIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACAGTGCCGCTCCAAATTGTGGAGTTTTATTTGATCTTGTCAGCT---------ATA---GCCGTAGTTGCAGGT---GCATTA------------------------------------TTCTGGAGA---CTTATGGTCGCATCAGTGTTGATGTTGGTCTTTGGTTATATGGGTGAA---------ACC------------------GGT------GCA---------------------------------ATG------------------------------------------------------------------AACATG------------------TTTTTTGGA---TGGTTCCTCGGGATGCTTGGTTGGCTATATATTTTGTATGAGATC---------------CAC------AAA---GGTGAGGCTGCTGAGATTAATGCGGCT------GAA---GGGACGGAGGCATCC---CAG---TTT---GCT---TTT---GAT---GCGATA---AAATGGATAGTAACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILSA---I-AVVAG-AL------------FWR-LMVASVLMLVFGYMGE---T------G--A-----------M----------------------NM------FFG-WFLGMLGWLYILYEI-----H--K-GEAAEINAA--E-GTEAS-Q-F-A-F-D-AI-KWIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ929957 [I-Gamma2-a] PRGD_OTU382_17e1d76f04d9d4fd31cc897b6bf23693 gb|KJ929957| PRGD_OTU382_17e1d76f04d9d4fd31cc897b6bf23693, putative proteorhodopsin gene, partial cds. PRGD_OTU382_17e1d76f04d9d4fd31cc897b6bf23693, putative proteorhodopsin gene, partial cds. KJ929957 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/A subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Mediterranean Sea (33.762, 29.175), Indian Ocean (-33.28, 45.35) CTTCTTACCGTACCGCTCCAGTTTGTAGAATTTTATCTGATTCTGGCAGCCATCACGGTTGTTAGTGCTGGTCTCTTCTGGAAGCTGATGATCGCATCGATTGCGATGCTTATCTTCGGGTTTGTTGGCGAGGCTGGAATTGCAAACGCGATGATCTTCGGGATCCTAGGGGTTCTGGCTTGGGTTTATATCCTGTACGAGATCTTCGCTGGTGAGGCAAGCAAGGTAAACGCTGCTAGCGGAAATGCCGCGAGCCAAAAGGCCTATAATGCCCTTAAGTGGATCGTTTCAGTA LLTVPLQFVEFYLILAAITVVSAGLFWKLMIASIAMLIFGFVGEAGIANAMIFGILGVLAWVYILYEIFAGEASKVNAASGNAASQKAYNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTTACCGTACCGCTCCAGTTTGTAGAATTTTATCTGATTCTGGCAGCC---------ATC---ACGGTTGTTAGTGCT---GGTCTC------------------------------------TTCTGGAAG---CTGATGATCGCATCGATTGCGATGCTTATCTTCGGGTTTGTTGGCGAG---------GCT------------------GGA------ATT---------------------------------GCA------------------------------------------------------------------AACGCG------------------ATGATCTTC---GGGATCCTAGGGGTTCTGGCTTGGGTTTATATCCTGTACGAGATC---------------TTC------GCT---GGTGAGGCAAGCAAGGTAAACGCTGCT------AGC---GGAAATGCCGCGAGC---CAA---AAG---GCC---TAT---AAT---GCCCTT---AAGTGGATCGTTTCAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQFVEFYLILAA---I-TVVSA-GL------------FWK-LMIASIAMLIFGFVGE---A------G--I-----------A----------------------NA------MIF-GILGVLAWVYILYEI-----F--A-GEASKVNAA--S-GNAAS-Q-K-A-Y-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ929963 [I-Gamma2-a] PRGD_OTU382_d053738125e284a6db5846886b480258 gb|KJ929963| PRGD_OTU382_d053738125e284a6db5846886b480258, putative proteorhodopsin gene, partial cds. PRGD_OTU382_d053738125e284a6db5846886b480258, putative proteorhodopsin gene, partial cds. KJ929963 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/A subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Indian Ocean (-33.28, 45.35) CTTCTTACCGTACCGCTCCAGTTTGTAGAATTTTATCTGATTCTCGCAGCCATCACGGTTGTAAGTGCTGGTCTCTTCTGGAAGCTGATGATCGCATCGATTGCGATGCTTATCTTCGGGTTTGTTGGCGAGGCTGGAATTGCAAACGCGATGATCTTCGGGATCCTAGGAGTTCTGGCTTGGGTTTATATCCTGTACGAGATCTTCGCTGGTGAGGCAAGCAAGGTAAACGCTGCTAGCGGAAATGCAGCGAGCCAAAAGGCCTATAATGCCCTCAAGTGGATCGTTTCAGTA LLTVPLQFVEFYLILAAITVVSAGLFWKLMIASIAMLIFGFVGEAGIANAMIFGILGVLAWVYILYEIFAGEASKVNAASGNAASQKAYNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTTACCGTACCGCTCCAGTTTGTAGAATTTTATCTGATTCTCGCAGCC---------ATC---ACGGTTGTAAGTGCT---GGTCTC------------------------------------TTCTGGAAG---CTGATGATCGCATCGATTGCGATGCTTATCTTCGGGTTTGTTGGCGAG---------GCT------------------GGA------ATT---------------------------------GCA------------------------------------------------------------------AACGCG------------------ATGATCTTC---GGGATCCTAGGAGTTCTGGCTTGGGTTTATATCCTGTACGAGATC---------------TTC------GCT---GGTGAGGCAAGCAAGGTAAACGCTGCT------AGC---GGAAATGCAGCGAGC---CAA---AAG---GCC---TAT---AAT---GCCCTC---AAGTGGATCGTTTCAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQFVEFYLILAA---I-TVVSA-GL------------FWK-LMIASIAMLIFGFVGE---A------G--I-----------A----------------------NA------MIF-GILGVLAWVYILYEI-----F--A-GEASKVNAA--S-GNAAS-Q-K-A-Y-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ929966 [I-Gamma2-a] PRGD_OTU382_ffb466dba79f8001b8e9281cf5aae372 gb|KJ929966| PRGD_OTU382_ffb466dba79f8001b8e9281cf5aae372, putative proteorhodopsin gene, partial cds. PRGD_OTU382_ffb466dba79f8001b8e9281cf5aae372, putative proteorhodopsin gene, partial cds. KJ929966 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/A subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-33.28, 45.35) CTTCTTACCGTACCGCTCCAGTTTGTAGAATTTTATCTGATTCTGGCAGCCATCACGGTTGTTAGTGCTGGTCTTTTCTGGAAGCTGATGATCGCATCGATTGCGATGCTTATCTTCGGGTTTGTTGGCGAGGCTGGAATTGCAAACGCGATGATCTTCGGGATCCTAGGGGTTCTGGCTTGGGTTTATATCCTGTACGAGATCTTCGCTGGTGAGGCAAGCAAGGTAAACGCTGCCAGCGGAAATGCCGCGAGCCAAAAGGCCTATAATGCCCTTAAGTGGATCGTTTCAGTA LLTVPLQFVEFYLILAAITVVSAGLFWKLMIASIAMLIFGFVGEAGIANAMIFGILGVLAWVYILYEIFAGEASKVNAASGNAASQKAYNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTTACCGTACCGCTCCAGTTTGTAGAATTTTATCTGATTCTGGCAGCC---------ATC---ACGGTTGTTAGTGCT---GGTCTT------------------------------------TTCTGGAAG---CTGATGATCGCATCGATTGCGATGCTTATCTTCGGGTTTGTTGGCGAG---------GCT------------------GGA------ATT---------------------------------GCA------------------------------------------------------------------AACGCG------------------ATGATCTTC---GGGATCCTAGGGGTTCTGGCTTGGGTTTATATCCTGTACGAGATC---------------TTC------GCT---GGTGAGGCAAGCAAGGTAAACGCTGCC------AGC---GGAAATGCCGCGAGC---CAA---AAG---GCC---TAT---AAT---GCCCTT---AAGTGGATCGTTTCAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQFVEFYLILAA---I-TVVSA-GL------------FWK-LMIASIAMLIFGFVGE---A------G--I-----------A----------------------NA------MIF-GILGVLAWVYILYEI-----F--A-GEASKVNAA--S-GNAAS-Q-K-A-Y-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ929958 [I-Gamma2-a] PRGD_OTU382_329254b219ff879e3e79e39d86c986f8 gb|KJ929958| PRGD_OTU382_329254b219ff879e3e79e39d86c986f8, putative proteorhodopsin gene, partial cds. PRGD_OTU382_329254b219ff879e3e79e39d86c986f8, putative proteorhodopsin gene, partial cds. KJ929958 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/A subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTCTTACTGTACCGCTTCAGTTTGTAGAGTTCTATTTGATTCTGGCAGCTATAACGGTTGTAAGTGCTGGTCTGTTTTGGAAACTGATGATCGCATCAATTGCTATGCTCATCTTCGGGTTCGTTGGTGAGGCTGGAATTGCCAATGCAATGATCTTCGGCATCCTAGGACTACTGGCTTGGGTTTATATCTTGTACGAGATCTTCATGGGTGAGGCAAGCAAGGTAAACGCTGCGAGCGGAAATGCCGCGAGCCAAAAGGCCTACAATGCCCTAAAGTGGATCGTCTCAGTT LLTVPLQFVEFYLILAAITVVSAGLFWKLMIASIAMLIFGFVGEAGIANAMIFGILGLLAWVYILYEIFMGEASKVNAASGNAASQKAYNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTTACTGTACCGCTTCAGTTTGTAGAGTTCTATTTGATTCTGGCAGCT---------ATA---ACGGTTGTAAGTGCT---GGTCTG------------------------------------TTTTGGAAA---CTGATGATCGCATCAATTGCTATGCTCATCTTCGGGTTCGTTGGTGAG---------GCT------------------GGA------ATT---------------------------------GCC------------------------------------------------------------------AATGCA------------------ATGATCTTC---GGCATCCTAGGACTACTGGCTTGGGTTTATATCTTGTACGAGATC---------------TTC------ATG---GGTGAGGCAAGCAAGGTAAACGCTGCG------AGC---GGAAATGCCGCGAGC---CAA---AAG---GCC---TAC---AAT---GCCCTA---AAGTGGATCGTCTCAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQFVEFYLILAA---I-TVVSA-GL------------FWK-LMIASIAMLIFGFVGE---A------G--I-----------A----------------------NA------MIF-GILGLLAWVYILYEI-----F--M-GEASKVNAA--S-GNAAS-Q-K-A-Y-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ929956 [I-Gamma2-a] PRGD_OTU382_otuREP_db91b330543be3c9efae4137cf346622 gb|KJ929956| PRGD_OTU382_otuREP_db91b330543be3c9efae4137cf346622, putative proteorhodopsin gene, partial cds. PRGD_OTU382_otuREP_db91b330543be3c9efae4137cf346622, putative proteorhodopsin gene, partial cds. KJ929956 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/A subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) CTCCTTACCGTACCGCTTCAGTTTGTGGAGTTTTATTTGATTCTGGCAGCTATCACGGTAGTTAGCGCAGGTCTGTTCTGGAAGCTGATGATCGCGTCAATTGCGATGCTCGTCTTCGGGTTCGTTGGTGAGGCTGGAATCGCCAATGCAATGATCTTCGGCATCCTAGGACTACTGGCTTGGGTATATATCTTGTACGAGATCTTCGCTGGTGAGGCAAGCAAGGTAAACGCTGCGAGCGGAAACGCTGCAAGCCAGAAAGCCTACAATGCCCTTAAGTGGATCGTTTCAGTT LLTVPLQFVEFYLILAAITVVSAGLFWKLMIASIAMLVFGFVGEAGIANAMIFGILGLLAWVYILYEIFAGEASKVNAASGNAASQKAYNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTTACCGTACCGCTTCAGTTTGTGGAGTTTTATTTGATTCTGGCAGCT---------ATC---ACGGTAGTTAGCGCA---GGTCTG------------------------------------TTCTGGAAG---CTGATGATCGCGTCAATTGCGATGCTCGTCTTCGGGTTCGTTGGTGAG---------GCT------------------GGA------ATC---------------------------------GCC------------------------------------------------------------------AATGCA------------------ATGATCTTC---GGCATCCTAGGACTACTGGCTTGGGTATATATCTTGTACGAGATC---------------TTC------GCT---GGTGAGGCAAGCAAGGTAAACGCTGCG------AGC---GGAAACGCTGCAAGC---CAG---AAA---GCC---TAC---AAT---GCCCTT---AAGTGGATCGTTTCAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQFVEFYLILAA---I-TVVSA-GL------------FWK-LMIASIAMLVFGFVGE---A------G--I-----------A----------------------NA------MIF-GILGLLAWVYILYEI-----F--A-GEASKVNAA--S-GNAAS-Q-K-A-Y-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ929962 [I-Gamma2-a] PRGD_OTU382_c9bf1c36daad156d34adb2cd52acc092 gb|KJ929962| PRGD_OTU382_c9bf1c36daad156d34adb2cd52acc092, putative proteorhodopsin gene, partial cds. PRGD_OTU382_c9bf1c36daad156d34adb2cd52acc092, putative proteorhodopsin gene, partial cds. KJ929962 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/A subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTTCTTACTGTACCGCTCCAGTTTGTAGAGTTTTATTTAATTCTGGCAGCGATCACGGTTGTTAGTGCTGGTCTATTTTGGAAGTTGATGATCGCGTCTATTGCTATGCTCGTCTTCGGGTTCGTTGGCGAGGCAGGAATTGCCAATGCGATGATCTTCGGCATCCTAGGTCTTCTGGCTTGGGTTTATATCCTATATGAGATCTTCGCTGGTGAGGCAAGCAAGGTGAACGCAGCTAGCGGAAATGCCGCGAGCCAAAAGGCCTACAATGCTCTTAAGTGGATCGTTTCAGTT LLTVPLQFVEFYLILAAITVVSAGLFWKLMIASIAMLVFGFVGEAGIANAMIFGILGLLAWVYILYEIFAGEASKVNAASGNAASQKAYNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTTACTGTACCGCTCCAGTTTGTAGAGTTTTATTTAATTCTGGCAGCG---------ATC---ACGGTTGTTAGTGCT---GGTCTA------------------------------------TTTTGGAAG---TTGATGATCGCGTCTATTGCTATGCTCGTCTTCGGGTTCGTTGGCGAG---------GCA------------------GGA------ATT---------------------------------GCC------------------------------------------------------------------AATGCG------------------ATGATCTTC---GGCATCCTAGGTCTTCTGGCTTGGGTTTATATCCTATATGAGATC---------------TTC------GCT---GGTGAGGCAAGCAAGGTGAACGCAGCT------AGC---GGAAATGCCGCGAGC---CAA---AAG---GCC---TAC---AAT---GCTCTT---AAGTGGATCGTTTCAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQFVEFYLILAA---I-TVVSA-GL------------FWK-LMIASIAMLVFGFVGE---A------G--I-----------A----------------------NA------MIF-GILGLLAWVYILYEI-----F--A-GEASKVNAA--S-GNAAS-Q-K-A-Y-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ929959 [I-Gamma2-a] PRGD_OTU382_3c6b559eaf39d8c430952e2f3e1ed667 gb|KJ929959| PRGD_OTU382_3c6b559eaf39d8c430952e2f3e1ed667, putative proteorhodopsin gene, partial cds. PRGD_OTU382_3c6b559eaf39d8c430952e2f3e1ed667, putative proteorhodopsin gene, partial cds. KJ929959 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/A subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTCTTACTGTACCGCTTCAGTTTGTAGAGTTTTATTTAATTCTGGCAGCTATCACGGTTGTTAGTGCTGGTCTATTTTGGAAATTGATGATCGCGTCTCTAGTTATGCTGATCTTCGGATTCCTCGGCGAGGCTGGACTAATGGGGGGTATGATTGCCGGTATTATCGGGATGCTGGCTTGGATTTATATCCTATATGAAATCTTCGCTGGAGAGGCTAGCAAGGTTAACGCAGCTAGCGGAAATGCCGCGAGCCAAAAGGCCTACAATGCTCTTAAGTGGATCGTTTCAGTT LLTVPLQFVEFYLILAAITVVSAGLFWKLMIASLVMLIFGFLGEAGLMGGMIAGIIGMLAWIYILYEIFAGEASKVNAASGNAASQKAYNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTTACTGTACCGCTTCAGTTTGTAGAGTTTTATTTAATTCTGGCAGCT---------ATC---ACGGTTGTTAGTGCT---GGTCTA------------------------------------TTTTGGAAA---TTGATGATCGCGTCTCTAGTTATGCTGATCTTCGGATTCCTCGGCGAG---------GCT------------------GGA------CTA---------------------------------ATG------------------------------------------------------------------GGGGGT------------------ATGATTGCC---GGTATTATCGGGATGCTGGCTTGGATTTATATCCTATATGAAATC---------------TTC------GCT---GGAGAGGCTAGCAAGGTTAACGCAGCT------AGC---GGAAATGCCGCGAGC---CAA---AAG---GCC---TAC---AAT---GCTCTT---AAGTGGATCGTTTCAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQFVEFYLILAA---I-TVVSA-GL------------FWK-LMIASLVMLIFGFLGE---A------G--L-----------M----------------------GG------MIA-GIIGMLAWIYILYEI-----F--A-GEASKVNAA--S-GNAAS-Q-K-A-Y-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ929964 [I-Gamma2-a] PRGD_OTU382_d5fbd7267111b68a5ebd960c0a4ee06b gb|KJ929964| PRGD_OTU382_d5fbd7267111b68a5ebd960c0a4ee06b, putative proteorhodopsin gene, partial cds. PRGD_OTU382_d5fbd7267111b68a5ebd960c0a4ee06b, putative proteorhodopsin gene, partial cds. KJ929964 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/A subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCCTTACCGTACCGCTCCAATTTGTAGAGTTTTATTTGATTTTGGCAGCTATCACGGTCGTTAGTGCAGGCCTATTTTGGAAGTTGATGATCGCGTCTCTCGTTATGCTGATCTTCGGATTCCTAGGTGAGGCTGGACTAATGGCGGGCATGATAGCTGGTATTATCGGGATGCTAGCTTGGATTTATATCCTATACGAAATCTTCGCTGGTGAGGCCAGTAAGGTTAATGCCGCTAGCGGAAATGCTGCAAGCCAAAAGGCTTACAATGCTCTTAAGTGGATCGTTTCGGTT LLTVPLQFVEFYLILAAITVVSAGLFWKLMIASLVMLIFGFLGEAGLMAGMIAGIIGMLAWIYILYEIFAGEASKVNAASGNAASQKAYNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTTACCGTACCGCTCCAATTTGTAGAGTTTTATTTGATTTTGGCAGCT---------ATC---ACGGTCGTTAGTGCA---GGCCTA------------------------------------TTTTGGAAG---TTGATGATCGCGTCTCTCGTTATGCTGATCTTCGGATTCCTAGGTGAG---------GCT------------------GGA------CTA---------------------------------ATG------------------------------------------------------------------GCGGGC------------------ATGATAGCT---GGTATTATCGGGATGCTAGCTTGGATTTATATCCTATACGAAATC---------------TTC------GCT---GGTGAGGCCAGTAAGGTTAATGCCGCT------AGC---GGAAATGCTGCAAGC---CAA---AAG---GCT---TAC---AAT---GCTCTT---AAGTGGATCGTTTCGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQFVEFYLILAA---I-TVVSA-GL------------FWK-LMIASLVMLIFGFLGE---A------G--L-----------M----------------------AG------MIA-GIIGMLAWIYILYEI-----F--A-GEASKVNAA--S-GNAAS-Q-K-A-Y-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ929965 [I-Gamma2-a] PRGD_OTU382_e11c9a0cd3ad3525bb9e83a9790b720a gb|KJ929965| PRGD_OTU382_e11c9a0cd3ad3525bb9e83a9790b720a, putative proteorhodopsin gene, partial cds. PRGD_OTU382_e11c9a0cd3ad3525bb9e83a9790b720a, putative proteorhodopsin gene, partial cds. KJ929965 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/A subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTCTTACTGTACCGCTCCAATTTGTAGAGTTTTATTTGATTTTGGCAGCTATTACGGTCGTTAGTGCAGGCCTATTTTGGAAGTTGATGATCGCATCTCTCGTTATGCTGATCTTCGGATTCCTAGGTGAGGCTGGACTAATGGCGGGTATGATAGCTGGTATTATCGGGATGCTGGCGTGGATTTATATCCTATACGAAATCTTCGCTGGTGAGGCCAGTAAGGTTAATGCCGCTAGCGGAAATGCTGCAAGCCAAAAGGCTTACAATGCCCTTAAGTGGATCGTTTCGGTT LLTVPLQFVEFYLILAAITVVSAGLFWKLMIASLVMLIFGFLGEAGLMAGMIAGIIGMLAWIYILYEIFAGEASKVNAASGNAASQKAYNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTTACTGTACCGCTCCAATTTGTAGAGTTTTATTTGATTTTGGCAGCT---------ATT---ACGGTCGTTAGTGCA---GGCCTA------------------------------------TTTTGGAAG---TTGATGATCGCATCTCTCGTTATGCTGATCTTCGGATTCCTAGGTGAG---------GCT------------------GGA------CTA---------------------------------ATG------------------------------------------------------------------GCGGGT------------------ATGATAGCT---GGTATTATCGGGATGCTGGCGTGGATTTATATCCTATACGAAATC---------------TTC------GCT---GGTGAGGCCAGTAAGGTTAATGCCGCT------AGC---GGAAATGCTGCAAGC---CAA---AAG---GCT---TAC---AAT---GCCCTT---AAGTGGATCGTTTCGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQFVEFYLILAA---I-TVVSA-GL------------FWK-LMIASLVMLIFGFLGE---A------G--L-----------M----------------------AG------MIA-GIIGMLAWIYILYEI-----F--A-GEASKVNAA--S-GNAAS-Q-K-A-Y-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ929961 [I-Gamma2-a] PRGD_OTU382_6626675ebb303d6107674de39f73f4be gb|KJ929961| PRGD_OTU382_6626675ebb303d6107674de39f73f4be, putative proteorhodopsin gene, partial cds. PRGD_OTU382_6626675ebb303d6107674de39f73f4be, putative proteorhodopsin gene, partial cds. KJ929961 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/A subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) CTTCTTACTGTACCGCTTCAGTTTGTAGAATTTTATTTGATTCTCGCAGCTATCACAGTCGTTAGTGCAGGTCTATTTTGGAAGTTGATGATCGCTTCTCTAGTTATGCTGATCTTCGGGTTCTTAGGTGAAGCTGGACTAATGGCAGGCATGATCGCTGGTATTATCGGGATGCTGGCTTGGATTTATATCCTGTATGAAATCTTCGCTGGTGAGGCTAGTAAGGTTAACGCCGCTAGCGGAAATGCTGCGAGCCAAAAGGCCTACAATGCTCTTAAGTGGATCGTATCAGTA LLTVPLQFVEFYLILAAITVVSAGLFWKLMIASLVMLIFGFLGEAGLMAGMIAGIIGMLAWIYILYEIFAGEASKVNAASGNAASQKAYNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTTACTGTACCGCTTCAGTTTGTAGAATTTTATTTGATTCTCGCAGCT---------ATC---ACAGTCGTTAGTGCA---GGTCTA------------------------------------TTTTGGAAG---TTGATGATCGCTTCTCTAGTTATGCTGATCTTCGGGTTCTTAGGTGAA---------GCT------------------GGA------CTA---------------------------------ATG------------------------------------------------------------------GCAGGC------------------ATGATCGCT---GGTATTATCGGGATGCTGGCTTGGATTTATATCCTGTATGAAATC---------------TTC------GCT---GGTGAGGCTAGTAAGGTTAACGCCGCT------AGC---GGAAATGCTGCGAGC---CAA---AAG---GCC---TAC---AAT---GCTCTT---AAGTGGATCGTATCAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQFVEFYLILAA---I-TVVSA-GL------------FWK-LMIASLVMLIFGFLGE---A------G--L-----------M----------------------AG------MIA-GIIGMLAWIYILYEI-----F--A-GEASKVNAA--S-GNAAS-Q-K-A-Y-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ929960 [I-Gamma2-a] PRGD_OTU382_4b546eab6c610e514f4063f0efe6519d gb|KJ929960| PRGD_OTU382_4b546eab6c610e514f4063f0efe6519d, putative proteorhodopsin gene, partial cds. PRGD_OTU382_4b546eab6c610e514f4063f0efe6519d, putative proteorhodopsin gene, partial cds. KJ929960 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/A subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTTCTTACTGTACCGCTCCAGTTTGTTGAGTTTTATTTGATTCTGGCGGCTATCACGGTTGTTAGTGCAGGTCTATTTTGGAAATTGATGATCGCATCTCTAGTTATGCTGATCTTCGGATTCCTCGGAGAGGCTGGACTAATGGCGGGTATGATCGCTGGTATTATTGGGATGCTGGCTTGGATCTACATCCTGTATGAAATCTTCGCTGGTGAGGCTAGTAAGGTTAATGCCGCTAGCGGTAATGCCGCGAGCCAAAAAGCCTACAATGCTCTTAAGTGGATCGTATCAGTA LLTVPLQFVEFYLILAAITVVSAGLFWKLMIASLVMLIFGFLGEAGLMAGMIAGIIGMLAWIYILYEIFAGEASKVNAASGNAASQKAYNALKWIVSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTTACTGTACCGCTCCAGTTTGTTGAGTTTTATTTGATTCTGGCGGCT---------ATC---ACGGTTGTTAGTGCA---GGTCTA------------------------------------TTTTGGAAA---TTGATGATCGCATCTCTAGTTATGCTGATCTTCGGATTCCTCGGAGAG---------GCT------------------GGA------CTA---------------------------------ATG------------------------------------------------------------------GCGGGT------------------ATGATCGCT---GGTATTATTGGGATGCTGGCTTGGATCTACATCCTGTATGAAATC---------------TTC------GCT---GGTGAGGCTAGTAAGGTTAATGCCGCT------AGC---GGTAATGCCGCGAGC---CAA---AAA---GCC---TAC---AAT---GCTCTT---AAGTGGATCGTATCAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQFVEFYLILAA---I-TVVSA-GL------------FWK-LMIASLVMLIFGFLGE---A------G--L-----------M----------------------AG------MIA-GIIGMLAWIYILYEI-----F--A-GEASKVNAA--S-GNAAS-Q-K-A-Y-N-AL-KWIVSV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ929449 [I-Gamma2-a] PRGD_OTU127_78ef300e0b67084a06c28500ab63d7b3 gb|KJ929449| PRGD_OTU127_78ef300e0b67084a06c28500ab63d7b3, putative proteorhodopsin gene, partial cds. PRGD_OTU127_78ef300e0b67084a06c28500ab63d7b3, putative proteorhodopsin gene, partial cds. KJ929449 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/A subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTCCTAACTGTGCCATTGCAGTTTGTTGAGTTTTACCTGATCCTCGCAGCGATCACGGTAGTAAGCGCAACACTTTTTTGGAAACTCATGATTGCGTCACTCGTAATGCTGATGTTTGGCCTACTGGGTGAGCTCGGTTTCCAACCATGGATATTCGGACTCATTGGTCTGGCAGCGTGGTTTTACATCCTTTATGAAATCTTCGCTGGTGAAGCTAGTAAGGTTAACGCCGCTAGCGGGAATGCCGCGAGTCAGAAGGCATACAACGCTCTGAAGTGGATCGTTTCGATT LLTVPLQFVEFYLILAAITVVSATLFWKLMIASLVMLMFGLLGELGFQPWIFGLIGLAAWFYILYEIFAGEASKVNAASGNAASQKAYNALKWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTAACTGTGCCATTGCAGTTTGTTGAGTTTTACCTGATCCTCGCAGCG---------ATC---ACGGTAGTAAGCGCA---ACACTT------------------------------------TTTTGGAAA---CTCATGATTGCGTCACTCGTAATGCTGATGTTTGGCCTACTGGGTGAG---------CTC------------------GGT------TTC---------------------------------CAA------------------------------------------------------------------CCA---------------------TGGATATTC---GGACTCATTGGTCTGGCAGCGTGGTTTTACATCCTTTATGAAATC---------------TTC------GCT---GGTGAAGCTAGTAAGGTTAACGCCGCT------AGC---GGGAATGCCGCGAGT---CAG---AAG---GCA---TAC---AAC---GCTCTG---AAGTGGATCGTTTCGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQFVEFYLILAA---I-TVVSA-TL------------FWK-LMIASLVMLMFGLLGE---L------G--F-----------Q----------------------P-------WIF-GLIGLAAWFYILYEI-----F--A-GEASKVNAA--S-GNAAS-Q-K-A-Y-N-AL-KWIVSI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ929451 [I-Gamma2-a] PRGD_OTU127_dd2b43350173f737dca7c2f8de1d9f36 gb|KJ929451| PRGD_OTU127_dd2b43350173f737dca7c2f8de1d9f36, putative proteorhodopsin gene, partial cds. PRGD_OTU127_dd2b43350173f737dca7c2f8de1d9f36, putative proteorhodopsin gene, partial cds. KJ929451 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/A subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) CTCCTAACCGTGCCATTGCAGTTTGTTGAGTTTTACCTGATCCTCGCAGCGATCACGGTAGTTAGCGCAACACTTTTTTGGAAACTCATGATTGCGTCACTCGTCATGCTGATGTTTGGCCTACTGGGTGAGCTTGGTTTCCAACCATGGATATTCGGACTTATTGGTCTGGCGGCGTGGTTCTATATCCTTTACGAAATCTTCGCTGGTGAAGCTAGTAAGGTTAACGCCGCTAGCGGGAATGCCGCGAGTCAGAAGGCATACAACGCTCTGAAGTGGATTGTTTCGATT LLTVPLQFVEFYLILAAITVVSATLFWKLMIASLVMLMFGLLGELGFQPWIFGLIGLAAWFYILYEIFAGEASKVNAASGNAASQKAYNALKWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTAACCGTGCCATTGCAGTTTGTTGAGTTTTACCTGATCCTCGCAGCG---------ATC---ACGGTAGTTAGCGCA---ACACTT------------------------------------TTTTGGAAA---CTCATGATTGCGTCACTCGTCATGCTGATGTTTGGCCTACTGGGTGAG---------CTT------------------GGT------TTC---------------------------------CAA------------------------------------------------------------------CCA---------------------TGGATATTC---GGACTTATTGGTCTGGCGGCGTGGTTCTATATCCTTTACGAAATC---------------TTC------GCT---GGTGAAGCTAGTAAGGTTAACGCCGCT------AGC---GGGAATGCCGCGAGT---CAG---AAG---GCA---TAC---AAC---GCTCTG---AAGTGGATTGTTTCGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQFVEFYLILAA---I-TVVSA-TL------------FWK-LMIASLVMLMFGLLGE---L------G--F-----------Q----------------------P-------WIF-GLIGLAAWFYILYEI-----F--A-GEASKVNAA--S-GNAAS-Q-K-A-Y-N-AL-KWIVSI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ929448 [I-Gamma2-a] PRGD_OTU127_5cbacb8f1c72d2e5635bafd1179a9a2e gb|KJ929448| PRGD_OTU127_5cbacb8f1c72d2e5635bafd1179a9a2e, putative proteorhodopsin gene, partial cds. PRGD_OTU127_5cbacb8f1c72d2e5635bafd1179a9a2e, putative proteorhodopsin gene, partial cds. KJ929448 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/A subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) CTCCTAACCGTGCCATTGCAGTTTGTTGAGTTTTACCTGATCCTCGCGGCGATCACGGTAGTTAGCGCCACACTTTTTTGGAAACTCATGATTGCGTCACTCGTCATGCTGATGTTTGGCCTGCTGGGTGAGCTTGGTTTCCAACCATGGATATTCGGACTTATTGGTCTGGCGGCGTGGTTCTACATCCTTTATGAGATCTTCGCTGGTGAAGCTAGTAAGGTTAACGCCGCTAGCGGGAATGCCGCGAGTCAGAAGGCATACAACGCTCTGAAGTGGATCGTTTCGATT LLTVPLQFVEFYLILAAITVVSATLFWKLMIASLVMLMFGLLGELGFQPWIFGLIGLAAWFYILYEIFAGEASKVNAASGNAASQKAYNALKWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTAACCGTGCCATTGCAGTTTGTTGAGTTTTACCTGATCCTCGCGGCG---------ATC---ACGGTAGTTAGCGCC---ACACTT------------------------------------TTTTGGAAA---CTCATGATTGCGTCACTCGTCATGCTGATGTTTGGCCTGCTGGGTGAG---------CTT------------------GGT------TTC---------------------------------CAA------------------------------------------------------------------CCA---------------------TGGATATTC---GGACTTATTGGTCTGGCGGCGTGGTTCTACATCCTTTATGAGATC---------------TTC------GCT---GGTGAAGCTAGTAAGGTTAACGCCGCT------AGC---GGGAATGCCGCGAGT---CAG---AAG---GCA---TAC---AAC---GCTCTG---AAGTGGATCGTTTCGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQFVEFYLILAA---I-TVVSA-TL------------FWK-LMIASLVMLMFGLLGE---L------G--F-----------Q----------------------P-------WIF-GLIGLAAWFYILYEI-----F--A-GEASKVNAA--S-GNAAS-Q-K-A-Y-N-AL-KWIVSI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ929447 [I-Gamma2-a] PRGD_OTU127_otuREP_8c36086bb731ceb18450f2df89bd3a3d gb|KJ929447| PRGD_OTU127_otuREP_8c36086bb731ceb18450f2df89bd3a3d, putative proteorhodopsin gene, partial cds. PRGD_OTU127_otuREP_8c36086bb731ceb18450f2df89bd3a3d, putative proteorhodopsin gene, partial cds. KJ929447 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/A subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) CTCCTAACCGTGCCATTGCAGTTTGTTGAGTTTTACCTGATCCTCGCAGCTATCACGGTAGTTAGCGCAACACTTTTCTGGAAACTCATGATTGCGTCACTCGTCATGCTGATGTTTGGCCTACTGGGTGAGCTTGGTTTCCAACCATGGATATTCGGACTTATTGGTCTGGCGGCATGGTTCTACATCCTTTATGAAATCTTCGCTGGTGAAGCTAGTAAGGTTAACGCCGCTAGCGGTAATGCCGCGAGTCAGAAGGCCTACAACGCTCTCAAGTGGATCGTTTCGATT LLTVPLQFVEFYLILAAITVVSATLFWKLMIASLVMLMFGLLGELGFQPWIFGLIGLAAWFYILYEIFAGEASKVNAASGNAASQKAYNALKWIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTAACCGTGCCATTGCAGTTTGTTGAGTTTTACCTGATCCTCGCAGCT---------ATC---ACGGTAGTTAGCGCA---ACACTT------------------------------------TTCTGGAAA---CTCATGATTGCGTCACTCGTCATGCTGATGTTTGGCCTACTGGGTGAG---------CTT------------------GGT------TTC---------------------------------CAA------------------------------------------------------------------CCA---------------------TGGATATTC---GGACTTATTGGTCTGGCGGCATGGTTCTACATCCTTTATGAAATC---------------TTC------GCT---GGTGAAGCTAGTAAGGTTAACGCCGCT------AGC---GGTAATGCCGCGAGT---CAG---AAG---GCC---TAC---AAC---GCTCTC---AAGTGGATCGTTTCGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQFVEFYLILAA---I-TVVSA-TL------------FWK-LMIASLVMLMFGLLGE---L------G--F-----------Q----------------------P-------WIF-GLIGLAAWFYILYEI-----F--A-GEASKVNAA--S-GNAAS-Q-K-A-Y-N-AL-KWIVSI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma2-a]_KJ929450 [I-Gamma2-a] PRGD_OTU127_927ee328b62237d02f7c13d444488aa3 gb|KJ929450| PRGD_OTU127_927ee328b62237d02f7c13d444488aa3, putative proteorhodopsin gene, partial cds. PRGD_OTU127_927ee328b62237d02f7c13d444488aa3, putative proteorhodopsin gene, partial cds. KJ929450 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 2/A subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 2 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Arctic Ocean-Pacific side (69.5142, -133.4185), Indian Ocean (-23.5956, 69.0419) CTCCTAACCGTACCATTGCAGTTTGTTGAGTTTTACCTGATCCTCGCAGCTATCACGGTGGTTAGCGCAACACTTTTTTGGAAACTCATGATTGCGTCACTCGTCATGCTGATGTTTGGCCTGCTGGGTGAGCTCGGTTTCCAACCATGGATATTCGGACTTATTGGTCTGGCGGCGTGGTTCTACATCCTTTATGAAATCTTCGCTGGTGAAGCTAGTAAGGTTAACGCCGCTAGCGGGAATGCCGCGAGTCAGAGGGCCTACAACGCTCTGAAGTATATCGTTTCGATT LLTVPLQFVEFYLILAAITVVSATLFWKLMIASLVMLMFGLLGELGFQPWIFGLIGLAAWFYILYEIFAGEASKVNAASGNAASQRAYNALKYIVSI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTAACCGTACCATTGCAGTTTGTTGAGTTTTACCTGATCCTCGCAGCT---------ATC---ACGGTGGTTAGCGCA---ACACTT------------------------------------TTTTGGAAA---CTCATGATTGCGTCACTCGTCATGCTGATGTTTGGCCTGCTGGGTGAG---------CTC------------------GGT------TTC------------------------------------------------------------------------------------------------------CAACCA------------------TGGATATTC---GGACTTATTGGTCTGGCGGCGTGGTTCTACATCCTTTATGAAATC---------------TTC------GCT---GGTGAAGCTAGTAAGGTTAACGCCGCT------AGC---GGGAATGCCGCGAGT---CAG---AGG---GCC---TAC---AAC---GCTCTG---AAGTATATCGTTTCGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQFVEFYLILAA---I-TVVSA-TL------------FWK-LMIASLVMLMFGLLGE---L------G--F----------------------------------QP------WIF-GLIGLAAWFYILYEI-----F--A-GEASKVNAA--S-GNAAS-Q-R-A-Y-N-AL-KYIVSI-------------------------------------------------------------------------------------------------------------------------------- [I]_KJ929901 [I] PRGD_OTU352_otuREP_4e196045845bc3b62240e6dd8c914ba0 gb|KJ929901| PRGD_OTU352_otuREP_4e196045845bc3b62240e6dd8c914ba0, putative proteorhodopsin gene, partial cds. PRGD_OTU352_otuREP_4e196045845bc3b62240e6dd8c914ba0, putative proteorhodopsin gene, partial cds. KJ929901 [[proteorhodopsin super-cluster I]] proteorhodopsin super-cluster I proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTTATTACCGTACCGTTGCAAATTATTGAATTTTATTTGATATTGGTTGCAGTCGGTTTTAAAGGTACTGGCCTTTTTGTGAAATTATTACTTGCTTCAGTATTAATGTTAGTGTTCGGATATTTTGGAGAAGTTGGATTAGCAAATGCATGGTTATGCTTCATTCTTGGTATGGCAGCTTGGATATACATTTTGTACGAGATCTTCCTGGGAGAAGCAGGTCAATTTAGTGCAAAAAGCAACAATTTAGCCGGTCAGCAAGCATTTAATACGATCCGATTAATTGTAACCATC FITVPLQIIEFYLILVAVGFKGTGLFVKLLLASVLMLVFGYFGEVGLANAWLCFILGMAAWIYILYEIFLGEAGQFSAKSNNLAGQQAFNTIRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATTACCGTACCGTTGCAAATTATTGAATTTTATTTGATATTGGTTGCA---------GTC---GGTTTTAAAGGTACT---GGCCTT------------------------------------TTTGTGAAA---TTATTACTTGCTTCAGTATTAATGTTAGTGTTCGGATATTTTGGAGAA---------GTT------------------GGA------TTA---------------------------------GCA------------------------------------------------------------------AATGCA------------------TGGTTATGC---TTCATTCTTGGTATGGCAGCTTGGATATACATTTTGTACGAGATC---------------TTC------CTG---GGAGAAGCAGGTCAATTTAGTGCAAAA------AGC---AACAATTTAGCCGGT---CAG---CAA---GCA---TTT---AAT---ACGATC---CGATTAATTGTAACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FITVPLQIIEFYLILVA---V-GFKGT-GL------------FVK-LLLASVLMLVFGYFGE---V------G--L-----------A----------------------NA------WLC-FILGMAAWIYILYEI-----F--L-GEAGQFSAK--S-NNLAG-Q-Q-A-F-N-TI-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-env6-b]_KJ929653 [I-env6-b] PRGD_OTU183_otuREP_3008e031596c10fa93fb09047447713d gb|KJ929653| PRGD_OTU183_otuREP_3008e031596c10fa93fb09047447713d, putative proteorhodopsin gene, partial cds. PRGD_OTU183_otuREP_3008e031596c10fa93fb09047447713d, putative proteorhodopsin gene, partial cds. KJ929653 [[proteorhodopsin super-cluster I/env cluster 6/B subcluster]] proteorhodopsin super-cluster I env cluster 6 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) CTATTAACCGTGCCACTACAAATGATTGAATTCTATCTGATCTTAGCTGCAGTAACTGCAGTAAGCGCAGGCGTGTTCTATAGATTGTTAGTTGGTACATTAGTTATGTTGGTTGCAGGATATGCTGGTGAGGCTGGCATTATCAATGCAGCACTCGGATTTGTTATTGGTATGGCTGGATGGATATACATTCTATATGAAATCTTTTCCGGTGAGGCTGGGCAAGTTAGTAAAACTGTCAGCGCATCAGTAGCATCAGCATTCGCAGCTTGTCGTATGGTTGTACTTGTT LLTVPLQMIEFYLILAAVTAVSAGVFYRLLVGTLVMLVAGYAGEAGIINAALGFVIGMAGWIYILYEIFSGEAGQVSKTVSASVASAFAACRMVVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACCGTGCCACTACAAATGATTGAATTCTATCTGATCTTAGCTGCA---------GTA---ACTGCAGTAAGCGCA---GGCGTG------------------------------------TTCTATAGA---TTGTTAGTTGGTACATTAGTTATGTTGGTTGCAGGATATGCTGGTGAG---------GCT------------------GGC------ATT---------------------------------ATC------------------------------------------------------------------AATGCA------------------GCACTCGGA---TTTGTTATTGGTATGGCTGGATGGATATACATTCTATATGAAATC---------------TTT------TCC---GGTGAGGCTGGGCAAGTTAGTAAA---------ACT---GTCAGCGCATCAGTA---GCA---TCA---GCA---TTC---GCA---GCTTGT---CGTATGGTTGTACTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMIEFYLILAA---V-TAVSA-GV------------FYR-LLVGTLVMLVAGYAGE---A------G--I-----------I----------------------NA------ALG-FVIGMAGWIYILYEI-----F--S-GEAGQVSK---T-VSASV-A-S-A-F-A-AC-RMVVLV-------------------------------------------------------------------------------------------------------------------------------- [I-env6-b]_KJ929655 [I-env6-b] PRGD_OTU183_8e7d02e39cefb8b02f97235d827c2aca gb|KJ929655| PRGD_OTU183_8e7d02e39cefb8b02f97235d827c2aca, putative proteorhodopsin gene, partial cds. PRGD_OTU183_8e7d02e39cefb8b02f97235d827c2aca, putative proteorhodopsin gene, partial cds. KJ929655 [[proteorhodopsin super-cluster I/env cluster 6/B subcluster]] proteorhodopsin super-cluster I env cluster 6 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTATTAACCGTGCCACTACAAATGATTGAATTCTATCTGATCTTAGCTGCAGTAACTGCAGTAAGCGCAGGCGTGTTCTATAGATTGTTAGTTGGTACATTAGTTATGTTGGTTGCAGGATATGCTGGTGAGGCTGGCATTATCAATGCAGCACTCGGATTTGTTATTGGTATGGCTGGATGGATATACATTCTATATGAAATCTTTTCCGGT LLTVPLQMIEFYLILAAVTAVSAGVFYRLLVGTLVMLVAGYAGEAGIINAALGFVIGMAGWIYILYEIFSG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACCGTGCCACTACAAATGATTGAATTCTATCTGATCTTAGCTGCA---------GTA---ACTGCAGTAAGCGCA---GGCGTG------------------------------------TTCTATAGA---TTGTTAGTTGGTACATTAGTTATGTTGGTTGCAGGATATGCTGGTGAG---------GCT------------------GGC------ATT---------------------------------ATC------------------------------------------------------------------AATGCA------------------GCACTCGGA---TTTGTTATTGGTATGGCTGGATGGATATACATTCTATATGAAATC---------------TTT------TCC---GGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMIEFYLILAA---V-TAVSA-GV------------FYR-LLVGTLVMLVAGYAGE---A------G--I-----------I----------------------NA------ALG-FVIGMAGWIYILYEI-----F--S-G--------------------------------------------------------------------------------------------------------------------------------------------------------------------- [I-env6-b]_KJ929654 [I-env6-b] PRGD_OTU183_3507abc1bc2666a70b8475b79cbca34a gb|KJ929654| PRGD_OTU183_3507abc1bc2666a70b8475b79cbca34a, putative proteorhodopsin gene, partial cds. PRGD_OTU183_3507abc1bc2666a70b8475b79cbca34a, putative proteorhodopsin gene, partial cds. KJ929654 [[proteorhodopsin super-cluster I/env cluster 6/B subcluster]] proteorhodopsin super-cluster I env cluster 6 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTATTAACTGTGCCACTACAAATGATTGAATTCTATCTGATCTTAGCTGCAGTAACTGCAGTAAGCGCAGGAGTGTTCTATAGATTATTAGTTGGTACATTAGTTATGTTGGTTGCAGGATATGCTGGTGAGGCTGGCATTATCAATGCAGCACTCGGATTTGTTATTGGTATGGCTGGATGGATATACATTCTGTATGAAATCTTTTCCGGTGAAGCTGGACAAGTTAGTAAAACTGTCAGCGCATCAGTAGCATCAGCATTCGCAGCATGTCGTATGGTTGTACTTGTT LLTVPLQMIEFYLILAAVTAVSAGVFYRLLVGTLVMLVAGYAGEAGIINAALGFVIGMAGWIYILYEIFSGEAGQVSKTVSASVASAFAACRMVVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTAACTGTGCCACTACAAATGATTGAATTCTATCTGATCTTAGCTGCA---------GTA---ACTGCAGTAAGCGCA---GGAGTG------------------------------------TTCTATAGA---TTATTAGTTGGTACATTAGTTATGTTGGTTGCAGGATATGCTGGTGAG---------GCT------------------GGC------ATT---------------------------------ATC------------------------------------------------------------------AATGCA------------------GCACTCGGA---TTTGTTATTGGTATGGCTGGATGGATATACATTCTGTATGAAATC---------------TTT------TCC---GGTGAAGCTGGACAAGTTAGTAAA---------ACT---GTCAGCGCATCAGTA---GCA---TCA---GCA---TTC---GCA---GCATGT---CGTATGGTTGTACTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMIEFYLILAA---V-TAVSA-GV------------FYR-LLVGTLVMLVAGYAGE---A------G--I-----------I----------------------NA------ALG-FVIGMAGWIYILYEI-----F--S-GEAGQVSK---T-VSASV-A-S-A-F-A-AC-RMVVLV-------------------------------------------------------------------------------------------------------------------------------- [I-env6-b]_KJ929756 [I-env6-b] PRGD_OTU230_otuREP_b8bfe37f5074bfe88dfec8cf3987a5ee gb|KJ929756| PRGD_OTU230_otuREP_b8bfe37f5074bfe88dfec8cf3987a5ee, putative proteorhodopsin gene, partial cds. PRGD_OTU230_otuREP_b8bfe37f5074bfe88dfec8cf3987a5ee, putative proteorhodopsin gene, partial cds. KJ929756 [[proteorhodopsin super-cluster I/env cluster 6/B subcluster]] proteorhodopsin super-cluster I env cluster 6 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) ATTTTAACTGTACCGTTACAAATGATCGAATTCTACTTAATACTAGCAGCTGTAACAACAGTTAGTGCAGGTGTATTCAATAGACTGCTTGTAGGTACACTAGTCATGTTGATTGGTGGTTACTTAGGTGAAGCTGGAGTAATCAATGCGATGCTCGGATTCATCATCGGGATGGCAGGCTGGATATACATCCTGTATGAAATTTTTGCTGGTGAAGCAGGACAAAAAAGTACGTCTTGTGGAAGCGTGGGTGCTCAAATGGCATTCAATGCATGTCGTATGATCGTATTAGTC ILTVPLQMIEFYLILAAVTTVSAGVFNRLLVGTLVMLIGGYLGEAGVINAMLGFIIGMAGWIYILYEIFAGEAGQKSTSCGSVGAQMAFNACRMIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACTGTACCGTTACAAATGATCGAATTCTACTTAATACTAGCAGCT---------GTA---ACAACAGTTAGTGCA---GGTGTA------------------------------------TTCAATAGA---CTGCTTGTAGGTACACTAGTCATGTTGATTGGTGGTTACTTAGGTGAA---------GCT------------------GGA------GTA---------------------------------ATC------------------------------------------------------------------AATGCG------------------ATGCTCGGA---TTCATCATCGGGATGGCAGGCTGGATATACATCCTGTATGAAATT---------------TTT------GCT---GGTGAAGCAGGACAAAAAAGTACGTCT------TGT---GGAAGCGTGGGTGCT---CAA---ATG---GCA---TTC---AAT---GCATGT---CGTATGATCGTATTAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLQMIEFYLILAA---V-TTVSA-GV------------FNR-LLVGTLVMLIGGYLGE---A------G--V-----------I----------------------NA------MLG-FIIGMAGWIYILYEI-----F--A-GEAGQKSTS--C-GSVGA-Q-M-A-F-N-AC-RMIVLV-------------------------------------------------------------------------------------------------------------------------------- [I-env6-b]_KJ929757 [I-env6-b] PRGD_OTU230_bb0c337c6cd58cf331403a554198e669 gb|KJ929757| PRGD_OTU230_bb0c337c6cd58cf331403a554198e669, putative proteorhodopsin gene, partial cds. PRGD_OTU230_bb0c337c6cd58cf331403a554198e669, putative proteorhodopsin gene, partial cds. KJ929757 [[proteorhodopsin super-cluster I/env cluster 6/B subcluster]] proteorhodopsin super-cluster I env cluster 6 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) ATTTTAACTGTACCGTTACAAATGATCGAATTCTACTTAATACTAGCAGCTGTAACAACTGTTAGTGCAGGTGTATTCAATAGACTGCTTGTAGGTACACTAGTCATGTTGATTGGTGGTTACTTAGGTGAAGCTGGAGTAATCAATGCGATGCTCGGATTCGTCATCGGGATGGCAGGCTGGATATACATCCTGTATGAAATTTTCGCTGGTGAAGCAGGACAAGCAAGTACGTCTTGTGGAAGCGTTGGTGCACAAATGGCATTCAATGCATGTCGTATGATCGTATTAGTC ILTVPLQMIEFYLILAAVTTVSAGVFNRLLVGTLVMLIGGYLGEAGVINAMLGFVIGMAGWIYILYEIFAGEAGQASTSCGSVGAQMAFNACRMIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACTGTACCGTTACAAATGATCGAATTCTACTTAATACTAGCAGCT---------GTA---ACAACTGTTAGTGCA---GGTGTA------------------------------------TTCAATAGA---CTGCTTGTAGGTACACTAGTCATGTTGATTGGTGGTTACTTAGGTGAA---------GCT------------------GGA------GTA---------------------------------ATC------------------------------------------------------------------AATGCG------------------ATGCTCGGA---TTCGTCATCGGGATGGCAGGCTGGATATACATCCTGTATGAAATT---------------TTC------GCT---GGTGAAGCAGGACAAGCAAGTACGTCT------TGT---GGAAGCGTTGGTGCA---CAA---ATG---GCA---TTC---AAT---GCATGT---CGTATGATCGTATTAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLQMIEFYLILAA---V-TTVSA-GV------------FNR-LLVGTLVMLIGGYLGE---A------G--V-----------I----------------------NA------MLG-FVIGMAGWIYILYEI-----F--A-GEAGQASTS--C-GSVGA-Q-M-A-F-N-AC-RMIVLV-------------------------------------------------------------------------------------------------------------------------------- [I-env6-b]_KJ929837 [I-env6-b] PRGD_OTU288_otuREP_ed85da736765236640b7be9fa9bb641a gb|KJ929837| PRGD_OTU288_otuREP_ed85da736765236640b7be9fa9bb641a, putative proteorhodopsin gene, partial cds. PRGD_OTU288_otuREP_ed85da736765236640b7be9fa9bb641a, putative proteorhodopsin gene, partial cds. KJ929837 [[proteorhodopsin super-cluster I/env cluster 6/B subcluster]] proteorhodopsin super-cluster I env cluster 6 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -33.28, 45.35) CTACTTACAGTTCCATTGTTAATGATCGAATTCTATTTCATACTTGCAGCTGTTACAGCTGTGTCAGTAGGCATATTCTGGAGATTATTAATTGGTACTTTAGTGATGCTAGTAGGTGGATACTTAGGTGAAGCTGGAATAATATCAGCAATGCTAGGATTCATTATAGGAATGGCTGGCTGGATATACATTCTATATGAAATCTTTGCTGGTGAAGCAGCACAAAAATCTGAGTCTTGTGGAAGCGCAGGCGCTCAAATGGCATTCAATGCTTGTCGTACAATCGTATTAGTT LLTVPLLMIEFYFILAAVTAVSVGIFWRLLIGTLVMLVGGYLGEAGIISAMLGFIIGMAGWIYILYEIFAGEAAQKSESCGSAGAQMAFNACRTIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTTACAGTTCCATTGTTAATGATCGAATTCTATTTCATACTTGCAGCT---------GTT---ACAGCTGTGTCAGTA---GGCATA------------------------------------TTCTGGAGA---TTATTAATTGGTACTTTAGTGATGCTAGTAGGTGGATACTTAGGTGAA---------GCT------------------GGA------ATA---------------------------------ATA------------------------------------------------------------------TCAGCA------------------ATGCTAGGA---TTCATTATAGGAATGGCTGGCTGGATATACATTCTATATGAAATC---------------TTT------GCT---GGTGAAGCAGCACAAAAATCTGAGTCT------TGT---GGAAGCGCAGGCGCT---CAA---ATG---GCA---TTC---AAT---GCTTGT---CGTACAATCGTATTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLMIEFYFILAA---V-TAVSV-GI------------FWR-LLIGTLVMLVGGYLGE---A------G--I-----------I----------------------SA------MLG-FIIGMAGWIYILYEI-----F--A-GEAAQKSES--C-GSAGA-Q-M-A-F-N-AC-RTIVLV-------------------------------------------------------------------------------------------------------------------------------- [I-env6-a]_KJ929741 [I-env6-a] PRGD_OTU222_3268939c5c9cf92ec7fdbaffafc4f8fe gb|KJ929741| PRGD_OTU222_3268939c5c9cf92ec7fdbaffafc4f8fe, putative proteorhodopsin gene, partial cds. PRGD_OTU222_3268939c5c9cf92ec7fdbaffafc4f8fe, putative proteorhodopsin gene, partial cds. KJ929741 [[proteorhodopsin super-cluster I/env cluster 6/A subcluster]] proteorhodopsin super-cluster I env cluster 6 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTACTAACTGTACCTTTACAAATGATTGAATTTTACTTGATCCTAGTAGCTGTTACAGCTGTTTCTGTAGGAATCTTCTGGAGACTTTTAATAGGTACCTTAGTAATGCTTATTGGTGGTTTCGCTGGAGAGGCAGGAATGATGTCTGCAATGACAGGTTTCATCATAGGGATGATCGGTTGGTTATACATTCTTTATGAAATCTTTGCTGGTGAAGCAAGTAAAGCTAACGCGGCTAGCGGCAGTGCAGCATGTCAAACTGCTTTTGGCGCAATGCGTTTAATTGTTACAGTA LLTVPLQMIEFYLILVAVTAVSVGIFWRLLIGTLVMLIGGFAGEAGMMSAMTGFIIGMIGWLYILYEIFAGEASKANAASGSAACQTAFGAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTAACTGTACCTTTACAAATGATTGAATTTTACTTGATCCTAGTAGCT---------GTT---ACAGCTGTTTCTGTA---GGAATC------------------------------------TTCTGGAGA---CTTTTAATAGGTACCTTAGTAATGCTTATTGGTGGTTTCGCTGGAGAG---------GCA------------------GGA------ATG---------------------------------ATG------------------------------------------------------------------TCTGCA------------------ATGACAGGT---TTCATCATAGGGATGATCGGTTGGTTATACATTCTTTATGAAATC---------------TTT------GCT---GGTGAAGCAAGTAAAGCTAACGCGGCT------AGC---GGCAGTGCAGCATGT---CAA---ACT---GCT---TTT---GGC---GCAATG---CGTTTAATTGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMIEFYLILVA---V-TAVSV-GI------------FWR-LLIGTLVMLIGGFAGE---A------G--M-----------M----------------------SA------MTG-FIIGMIGWLYILYEI-----F--A-GEASKANAA--S-GSAAC-Q-T-A-F-G-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-env6-a]_KJ929740 [I-env6-a] PRGD_OTU222_otuREP_775c65a55d987f28a3971cad5fcd447f gb|KJ929740| PRGD_OTU222_otuREP_775c65a55d987f28a3971cad5fcd447f, putative proteorhodopsin gene, partial cds. PRGD_OTU222_otuREP_775c65a55d987f28a3971cad5fcd447f, putative proteorhodopsin gene, partial cds. KJ929740 [[proteorhodopsin super-cluster I/env cluster 6/A subcluster]] proteorhodopsin super-cluster I env cluster 6 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTATTAACAGTACCTCTACAAATGATTGAATTCTACTTAATACTAGCAGCTGTTACAGCTGTATCTGCTGGTATTTTCTGGAGATTGTTAATCGGTACTTTAGTAATGCTTATCGGTGGATTCGCTGGTGAAGCAGGAATGATGTCAGCAATGACTGGTTTCATTATAGGAATGATTGGTTGGTTATACATTCTGTATGAAATCTTTGCTGGTGAAGCAAGTAAAGCAAATGCTGCAAGCGGAAGTGCGGCGTGTCAAACTGCGTTTGGCGCAATGCGTTTAATTGTTACTGTA LLTVPLQMIEFYLILAAVTAVSAGIFWRLLIGTLVMLIGGFAGEAGMMSAMTGFIIGMIGWLYILYEIFAGEASKANAASGSAACQTAFGAMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACAGTACCTCTACAAATGATTGAATTCTACTTAATACTAGCAGCT---------GTT---ACAGCTGTATCTGCT---GGTATT------------------------------------TTCTGGAGA---TTGTTAATCGGTACTTTAGTAATGCTTATCGGTGGATTCGCTGGTGAA---------GCA------------------GGA------ATG---------------------------------ATG------------------------------------------------------------------TCAGCA------------------ATGACTGGT---TTCATTATAGGAATGATTGGTTGGTTATACATTCTGTATGAAATC---------------TTT------GCT---GGTGAAGCAAGTAAAGCAAATGCTGCA------AGC---GGAAGTGCGGCGTGT---CAA---ACT---GCG---TTT---GGC---GCAATG---CGTTTAATTGTTACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQMIEFYLILAA---V-TAVSA-GI------------FWR-LLIGTLVMLIGGFAGE---A------G--M-----------M----------------------SA------MTG-FIIGMIGWLYILYEI-----F--A-GEASKANAA--S-GSAAC-Q-T-A-F-G-AM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-env6]_KJ929841 [I-env6] PRGD_OTU292_otuREP_00684052aae44ac70767273d41aef0cd gb|KJ929841| PRGD_OTU292_otuREP_00684052aae44ac70767273d41aef0cd, putative proteorhodopsin gene, partial cds. PRGD_OTU292_otuREP_00684052aae44ac70767273d41aef0cd, putative proteorhodopsin gene, partial cds. KJ929841 [[proteorhodopsin super-cluster I/env cluster 6]] proteorhodopsin super-cluster I env cluster 6 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) TTACTAACTGTTCCATTACAAATAGCTGAATTTTACTTGATTCTAGCAGCCATTACGGCAGTAGCCGCTGGGTTATTCTGGAGGTTAATGATAGCTTCAATAGTAATGCTAGTTGGCGGTTACTTAGGAGAAGTTGGCCAGATTAGTGCTACATCAGGCTTCATAATAGGGATGCTCGGTTGGGCTTATATTATTTATGAAATATTCTTGGGTGAAGCGAGTAAGATTAATGCTGCAAGTGGATCTGCAGCAAGCCAAACAGCATTTAATGCGCTTCGCTTAATAGTAACTGTC LLTVPLQIAEFYLILAAITAVAAGLFWRLMIASIVMLVGGYLGEVGQISATSGFIIGMLGWAYIIYEIFLGEASKINAASGSAASQTAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTAACTGTTCCATTACAAATAGCTGAATTTTACTTGATTCTAGCAGCC---------ATT---ACGGCAGTAGCCGCT---GGGTTA------------------------------------TTCTGGAGG---TTAATGATAGCTTCAATAGTAATGCTAGTTGGCGGTTACTTAGGAGAA---------GTT------------------GGC------CAG---------------------------------ATT------------------------------------------------------------------AGTGCT------------------ACATCAGGC---TTCATAATAGGGATGCTCGGTTGGGCTTATATTATTTATGAAATA---------------TTC------TTG---GGTGAAGCGAGTAAGATTAATGCTGCA------AGT---GGATCTGCAGCAAGC---CAA---ACA---GCA---TTT---AAT---GCGCTT---CGCTTAATAGTAACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIAEFYLILAA---I-TAVAA-GL------------FWR-LMIASIVMLVGGYLGE---V------G--Q-----------I----------------------SA------TSG-FIIGMLGWAYIIYEI-----F--L-GEASKINAA--S-GSAAS-Q-T-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-env5]_KJ928687 [I-env5] PRGD_OTU047_5165dcfc5f39ed256a24dff63ed429cb gb|KJ928687| PRGD_OTU047_5165dcfc5f39ed256a24dff63ed429cb, putative proteorhodopsin gene, partial cds. PRGD_OTU047_5165dcfc5f39ed256a24dff63ed429cb, putative proteorhodopsin gene, partial cds. KJ928687 [[proteorhodopsin super-cluster I/env cluster 5]] proteorhodopsin super-cluster I env cluster 5 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45; -33.28, 45.35) TTGATTACCGTGCCACTTCAAATTATCGAATTTTATGTAATTCTTGCTGCTGTTACAACTGTTGCAGCTGCTTTATTCTGGAGACTTTTAGTTGCTTCATTAGTAATGTTGGTTTTCGGTTATTTAGGTGAAGCTGGAATTATGAACGCAATGCCTGCATTTATAATCGGAATGGCGGGCTGGTTGTACATCCTTTATGAGATCTTTGCTGGAGAAGCTAGTCAAGCGAATGCTGGCAGTGGAAACGCAGCAGGTCAACAAGCTTTTAGAGCACTATGTCTGATAGTGACTATT LITVPLQIIEFYVILAAVTTVAAALFWRLLVASLVMLVFGYLGEAGIMNAMPAFIIGMAGWLYILYEIFAGEASQANAGSGNAAGQQAFRALCLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACCGTGCCACTTCAAATTATCGAATTTTATGTAATTCTTGCTGCT---------GTT---ACAACTGTTGCAGCT---GCTTTA------------------------------------TTCTGGAGA---CTTTTAGTTGCTTCATTAGTAATGTTGGTTTTCGGTTATTTAGGTGAA---------GCT------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------AACGCA------------------ATGCCTGCA---TTTATAATCGGAATGGCGGGCTGGTTGTACATCCTTTATGAGATC---------------TTT------GCT---GGAGAAGCTAGTCAAGCGAATGCTGGC------AGT---GGAAACGCAGCAGGT---CAA---CAA---GCT---TTT---AGA---GCACTA---TGTCTGATAGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYVILAA---V-TTVAA-AL------------FWR-LLVASLVMLVFGYLGE---A------G--I-----------M----------------------NA------MPA-FIIGMAGWLYILYEI-----F--A-GEASQANAG--S-GNAAG-Q-Q-A-F-R-AL-CLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-env5]_KJ928695 [I-env5] PRGD_OTU047_b00622b64812cb191a3176ad7efca196 gb|KJ928695| PRGD_OTU047_b00622b64812cb191a3176ad7efca196, putative proteorhodopsin gene, partial cds. PRGD_OTU047_b00622b64812cb191a3176ad7efca196, putative proteorhodopsin gene, partial cds. KJ928695 [[proteorhodopsin super-cluster I/env cluster 5]] proteorhodopsin super-cluster I env cluster 5 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (72.0542, -130.8781), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGATTACAGTACCACTTCAAATTATCGAATTTTATGTAATTCTTGCTGCTGTTACAACTGTTGCAGCTGCTTTATTCTGGAGACTTTTAGTTGCTTCATTAGTAATGTTGGTTTTCGGTTATTTAGGTGAAGCTGGAATTATGAACGCAATGCCTGCATTTATAATCGGAATGGCGGGCTGGTTGTACATCCTTTATGAGATCTTTGCTGGAGAAGCTAGTCAAGCGAATGCTGGTAGTGGAAACGCAGCAGGTCAACAAGCTTTTAGAGCACTATGTCTGATAGTGACTATT LITVPLQIIEFYVILAAVTTVAAALFWRLLVASLVMLVFGYLGEAGIMNAMPAFIIGMAGWLYILYEIFAGEASQANAGSGNAAGQQAFRALCLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACAGTACCACTTCAAATTATCGAATTTTATGTAATTCTTGCTGCT---------GTT---ACAACTGTTGCAGCT---GCTTTA------------------------------------TTCTGGAGA---CTTTTAGTTGCTTCATTAGTAATGTTGGTTTTCGGTTATTTAGGTGAA---------GCT------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------AACGCA------------------ATGCCTGCA---TTTATAATCGGAATGGCGGGCTGGTTGTACATCCTTTATGAGATC---------------TTT------GCT---GGAGAAGCTAGTCAAGCGAATGCTGGT------AGT---GGAAACGCAGCAGGT---CAA---CAA---GCT---TTT---AGA---GCACTA---TGTCTGATAGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYVILAA---V-TTVAA-AL------------FWR-LLVASLVMLVFGYLGE---A------G--I-----------M----------------------NA------MPA-FIIGMAGWLYILYEI-----F--A-GEASQANAG--S-GNAAG-Q-Q-A-F-R-AL-CLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-env5]_KJ928699 [I-env5] PRGD_OTU047_f5ae75add4c613c7eea60fe3b004d4f9 gb|KJ928699| PRGD_OTU047_f5ae75add4c613c7eea60fe3b004d4f9, putative proteorhodopsin gene, partial cds. PRGD_OTU047_f5ae75add4c613c7eea60fe3b004d4f9, putative proteorhodopsin gene, partial cds. KJ928699 [[proteorhodopsin super-cluster I/env cluster 5]] proteorhodopsin super-cluster I env cluster 5 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTGATTACAGTGCCACTTCAAATTATTGAATTTTATGTAATTCTTGCTGCTGTTACTACTGTTGCAGCTGCTTTATTCTGGAGACTATTAGTTGCTTCATTAGTAATGTTGGTTTTCGGTTATCTAGGTGAAGCTGGAATTATGAACGCAATGCCTGCATTTATAATCGGAATGGCGGGCTGGTTGTACATCCTTTATGAGATCTTTGCTGGAGAAGCTAGCAAAGCGAATGCTGGTAGTGGAAACGCAGCAGGTCAACAAGCTTTTAGAGCACTATGTCTGATAGTGACTATT LITVPLQIIEFYVILAAVTTVAAALFWRLLVASLVMLVFGYLGEAGIMNAMPAFIIGMAGWLYILYEIFAGEASKANAGSGNAAGQQAFRALCLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTACAGTGCCACTTCAAATTATTGAATTTTATGTAATTCTTGCTGCT---------GTT---ACTACTGTTGCAGCT---GCTTTA------------------------------------TTCTGGAGA---CTATTAGTTGCTTCATTAGTAATGTTGGTTTTCGGTTATCTAGGTGAA---------GCT------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------AACGCA------------------ATGCCTGCA---TTTATAATCGGAATGGCGGGCTGGTTGTACATCCTTTATGAGATC---------------TTT------GCT---GGAGAAGCTAGCAAAGCGAATGCTGGT------AGT---GGAAACGCAGCAGGT---CAA---CAA---GCT---TTT---AGA---GCACTA---TGTCTGATAGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYVILAA---V-TTVAA-AL------------FWR-LLVASLVMLVFGYLGE---A------G--I-----------M----------------------NA------MPA-FIIGMAGWLYILYEI-----F--A-GEASKANAG--S-GNAAG-Q-Q-A-F-R-AL-CLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-env5]_KJ928683 [I-env5] PRGD_OTU047_056662abea2bae3c70d18319e3697f34 gb|KJ928683| PRGD_OTU047_056662abea2bae3c70d18319e3697f34, putative proteorhodopsin gene, partial cds. PRGD_OTU047_056662abea2bae3c70d18319e3697f34, putative proteorhodopsin gene, partial cds. KJ928683 [[proteorhodopsin super-cluster I/env cluster 5]] proteorhodopsin super-cluster I env cluster 5 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-33.28, 45.35) TTGATTACAGTACCACTTCAAATTATTGAATTTTATGTAATTCTTGCTGCTGTTACTACTGTTGCAGCTGCTTTATTCTGGAGACTACTAGTTGCTTCATTAGTAATGTTGGTTTTCGGTTATCTAGGTGAAGCTGGAATTATGAACGCAATGCCTGCATTTATAATCGGAATGGCGGGCTGGTTGTACATCCTTTATGAGATCTTTGCTGGGGAAGCTAGCCAAGCGAACGCTGGCAGTGGAAACGCAGCAGGTCAACAAGCTTTTAGAGCACTATGTCTGATAGTGACTATT LITVPLQIIEFYVILAAVTTVAAALFWRLLVASLVMLVFGYLGEAGIMNAMPAFIIGMAGWLYILYEIFAGEASQANAGSGNAAGQQAFRALCLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACAGTACCACTTCAAATTATTGAATTTTATGTAATTCTTGCTGCT---------GTT---ACTACTGTTGCAGCT---GCTTTA------------------------------------TTCTGGAGA---CTACTAGTTGCTTCATTAGTAATGTTGGTTTTCGGTTATCTAGGTGAA---------GCT------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------AACGCA------------------ATGCCTGCA---TTTATAATCGGAATGGCGGGCTGGTTGTACATCCTTTATGAGATC---------------TTT------GCT---GGGGAAGCTAGCCAAGCGAACGCTGGC------AGT---GGAAACGCAGCAGGT---CAA---CAA---GCT---TTT---AGA---GCACTA---TGTCTGATAGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYVILAA---V-TTVAA-AL------------FWR-LLVASLVMLVFGYLGE---A------G--I-----------M----------------------NA------MPA-FIIGMAGWLYILYEI-----F--A-GEASQANAG--S-GNAAG-Q-Q-A-F-R-AL-CLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-env5]_KJ928689 [I-env5] PRGD_OTU047_543d60a548c9d3ef4d5100be5a6a9dc5 gb|KJ928689| PRGD_OTU047_543d60a548c9d3ef4d5100be5a6a9dc5, putative proteorhodopsin gene, partial cds. PRGD_OTU047_543d60a548c9d3ef4d5100be5a6a9dc5, putative proteorhodopsin gene, partial cds. KJ928689 [[proteorhodopsin super-cluster I/env cluster 5]] proteorhodopsin super-cluster I env cluster 5 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) TTGATTACAGTGCCACTTCAAATTATTGAATTTTATGTAATTCTTGCTGCTGTTACTACTGTTGCAGCCGCTTTATTCTGGAGACTATTAGTTGCTTCATTAGTAATGTTGGTTTTTGGTTATTTAGGTGAAGCTGGAATTATGAACGCAATGCCTGCATTTATAATTGGAATGGCGGGCTGGTTGTACATTCTTTATGAGATCTTTGCTGGTGAAGCTAGCCAAGCGAATGCTGGCAGTGGAAACGCAGCAGGTCAACAAGCTTTTAGAGCACTATGTCTGATAGTGACTATT LITVPLQIIEFYVILAAVTTVAAALFWRLLVASLVMLVFGYLGEAGIMNAMPAFIIGMAGWLYILYEIFAGEASQANAGSGNAAGQQAFRALCLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACAGTGCCACTTCAAATTATTGAATTTTATGTAATTCTTGCTGCT---------GTT---ACTACTGTTGCAGCC---GCTTTA------------------------------------TTCTGGAGA---CTATTAGTTGCTTCATTAGTAATGTTGGTTTTTGGTTATTTAGGTGAA---------GCT------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------AACGCA------------------ATGCCTGCA---TTTATAATTGGAATGGCGGGCTGGTTGTACATTCTTTATGAGATC---------------TTT------GCT---GGTGAAGCTAGCCAAGCGAATGCTGGC------AGT---GGAAACGCAGCAGGT---CAA---CAA---GCT---TTT---AGA---GCACTA---TGTCTGATAGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYVILAA---V-TTVAA-AL------------FWR-LLVASLVMLVFGYLGE---A------G--I-----------M----------------------NA------MPA-FIIGMAGWLYILYEI-----F--A-GEASQANAG--S-GNAAG-Q-Q-A-F-R-AL-CLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-env5]_KJ928682 [I-env5] PRGD_OTU047_otuREP_95ed8f7831048afe0931f02c03767009 gb|KJ928682| PRGD_OTU047_otuREP_95ed8f7831048afe0931f02c03767009, putative proteorhodopsin gene, partial cds. PRGD_OTU047_otuREP_95ed8f7831048afe0931f02c03767009, putative proteorhodopsin gene, partial cds. KJ928682 [[proteorhodopsin super-cluster I/env cluster 5]] proteorhodopsin super-cluster I env cluster 5 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45; -33.28, 45.35) TTAATTACAGTGCCACTTCAAATTATCGAATTTTATGTAATTCTTGCTGCTGTTACTACTGTTGCAGCTGCTCTATTCTGGAGATTATTAGTTGCTTCATTAGTAATGTTAATCTTTGGTTATTTAGGTGAAGCTGGAATTATGAACGCAATGCCTGCATTTATTATCGGAATGGCGGGCTGGTTGTACATCCTTTATGAGATCTTTGCTGGTGAAGCTAGCCAAGCTAACGCTGGCAGTGGTAACGCAGCAGGTCAACAAGCCTTTAGAGCACTATGTCTGATAGTGACTATT LITVPLQIIEFYVILAAVTTVAAALFWRLLVASLVMLIFGYLGEAGIMNAMPAFIIGMAGWLYILYEIFAGEASQANAGSGNAAGQQAFRALCLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCACTTCAAATTATCGAATTTTATGTAATTCTTGCTGCT---------GTT---ACTACTGTTGCAGCT---GCTCTA------------------------------------TTCTGGAGA---TTATTAGTTGCTTCATTAGTAATGTTAATCTTTGGTTATTTAGGTGAA---------GCT------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------AACGCA------------------ATGCCTGCA---TTTATTATCGGAATGGCGGGCTGGTTGTACATCCTTTATGAGATC---------------TTT------GCT---GGTGAAGCTAGCCAAGCTAACGCTGGC------AGT---GGTAACGCAGCAGGT---CAA---CAA---GCC---TTT---AGA---GCACTA---TGTCTGATAGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYVILAA---V-TTVAA-AL------------FWR-LLVASLVMLIFGYLGE---A------G--I-----------M----------------------NA------MPA-FIIGMAGWLYILYEI-----F--A-GEASQANAG--S-GNAAG-Q-Q-A-F-R-AL-CLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-env5]_KJ928684 [I-env5] PRGD_OTU047_1912bc4ad724b1b2d04ad0f71a3d54dd gb|KJ928684| PRGD_OTU047_1912bc4ad724b1b2d04ad0f71a3d54dd, putative proteorhodopsin gene, partial cds. PRGD_OTU047_1912bc4ad724b1b2d04ad0f71a3d54dd, putative proteorhodopsin gene, partial cds. KJ928684 [[proteorhodopsin super-cluster I/env cluster 5]] proteorhodopsin super-cluster I env cluster 5 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACAGTGCCACTTCAAATTATTGAATTTTATGTAATTCTTGCTGCTGTTACTACTGTTGCAGCTGCTTTATTCTGGAGATTATTAGTTGCTTCATTGGTGATGTTAATTTTTGGATACCTAGGTGAAGCTGGAATTATGAACGCAATGCCTGCATTTATAATTGGAATGGCAGGTTGGTTGTACATCCTTTATGAGATCTTTGCTGGAGAAGCTAGCAAAGCGAATGCTGGTAGTGGAAACGCAGCAGGTCAACAAGCTTTTAGAGCACTATGTCTGATAGTGACTATT LITVPLQIIEFYVILAAVTTVAAALFWRLLVASLVMLIFGYLGEAGIMNAMPAFIIGMAGWLYILYEIFAGEASKANAGSGNAAGQQAFRALCLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCACTTCAAATTATTGAATTTTATGTAATTCTTGCTGCT---------GTT---ACTACTGTTGCAGCT---GCTTTA------------------------------------TTCTGGAGA---TTATTAGTTGCTTCATTGGTGATGTTAATTTTTGGATACCTAGGTGAA---------GCT------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------AACGCA------------------ATGCCTGCA---TTTATAATTGGAATGGCAGGTTGGTTGTACATCCTTTATGAGATC---------------TTT------GCT---GGAGAAGCTAGCAAAGCGAATGCTGGT------AGT---GGAAACGCAGCAGGT---CAA---CAA---GCT---TTT---AGA---GCACTA---TGTCTGATAGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYVILAA---V-TTVAA-AL------------FWR-LLVASLVMLIFGYLGE---A------G--I-----------M----------------------NA------MPA-FIIGMAGWLYILYEI-----F--A-GEASKANAG--S-GNAAG-Q-Q-A-F-R-AL-CLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-env5]_KJ928686 [I-env5] PRGD_OTU047_47ae2cd53f89cb37132ee5673286aee1 gb|KJ928686| PRGD_OTU047_47ae2cd53f89cb37132ee5673286aee1, putative proteorhodopsin gene, partial cds. PRGD_OTU047_47ae2cd53f89cb37132ee5673286aee1, putative proteorhodopsin gene, partial cds. KJ928686 [[proteorhodopsin super-cluster I/env cluster 5]] proteorhodopsin super-cluster I env cluster 5 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACAGTGCCACTTCAAATTATTGAATTTTATGTAATTCTTGCTGCTGTTACTACTGTTGCAGCTGCTCTATTCTGGAGATTATTAGTTGCTTCATTGGTGATGTTAATTTTTGGATACCTAGGTGAAGCTGGAATTATGAACGCAATGCCTGCATTTATAATTGGAATGGCAGGTTGGTTGTACATCCTTTATGAGATCTTTGCTGGTGAAGCTAGTAAAGCTAATGCTGGTAGTGGAAACGCAGCGGGTCAACAAGCTTTTAGAGCACTATGTCTGATAGTGACTATT LITVPLQIIEFYVILAAVTTVAAALFWRLLVASLVMLIFGYLGEAGIMNAMPAFIIGMAGWLYILYEIFAGEASKANAGSGNAAGQQAFRALCLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCACTTCAAATTATTGAATTTTATGTAATTCTTGCTGCT---------GTT---ACTACTGTTGCAGCT---GCTCTA------------------------------------TTCTGGAGA---TTATTAGTTGCTTCATTGGTGATGTTAATTTTTGGATACCTAGGTGAA---------GCT------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------AACGCA------------------ATGCCTGCA---TTTATAATTGGAATGGCAGGTTGGTTGTACATCCTTTATGAGATC---------------TTT------GCT---GGTGAAGCTAGTAAAGCTAATGCTGGT------AGT---GGAAACGCAGCGGGT---CAA---CAA---GCT---TTT---AGA---GCACTA---TGTCTGATAGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYVILAA---V-TTVAA-AL------------FWR-LLVASLVMLIFGYLGE---A------G--I-----------M----------------------NA------MPA-FIIGMAGWLYILYEI-----F--A-GEASKANAG--S-GNAAG-Q-Q-A-F-R-AL-CLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-env5]_KJ928694 [I-env5] PRGD_OTU047_afc630a46800a0b3e6e63dbd68f95d2a gb|KJ928694| PRGD_OTU047_afc630a46800a0b3e6e63dbd68f95d2a, putative proteorhodopsin gene, partial cds. PRGD_OTU047_afc630a46800a0b3e6e63dbd68f95d2a, putative proteorhodopsin gene, partial cds. KJ928694 [[proteorhodopsin super-cluster I/env cluster 5]] proteorhodopsin super-cluster I env cluster 5 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACAGTTCCACTTCAAATTATTGAATTTTATGTAATTCTTGCTGCTGTAACTACTGTTGCGGCTGCCTTATTCTGGAGATTATTAGTTGCCTCTTTGGTAATGCTAGTCTTTGGCTATTTAGGGGAAGCTGGAATTATGGGCACAATGCCTGCATTCATTATTGCAATGGCAGGTTGGTTGTACATCCTATATGAAATCTTTGCTGGTGAAGCTAGTAAAGCAAACGCTGGCAGTGGAAACGCAGCGGGTCAACAAGCTTTTAGAGCACTATGTTTAATAGTGACTATT LITVPLQIIEFYVILAAVTTVAAALFWRLLVASLVMLVFGYLGEAGIMGTMPAFIIAMAGWLYILYEIFAGEASKANAGSGNAAGQQAFRALCLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTTCCACTTCAAATTATTGAATTTTATGTAATTCTTGCTGCT---------GTA---ACTACTGTTGCGGCT---GCCTTA------------------------------------TTCTGGAGA---TTATTAGTTGCCTCTTTGGTAATGCTAGTCTTTGGCTATTTAGGGGAA---------GCT------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------GGCACA------------------ATGCCTGCA---TTCATTATTGCAATGGCAGGTTGGTTGTACATCCTATATGAAATC---------------TTT------GCT---GGTGAAGCTAGTAAAGCAAACGCTGGC------AGT---GGAAACGCAGCGGGT---CAA---CAA---GCT---TTT---AGA---GCACTA---TGTTTAATAGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYVILAA---V-TTVAA-AL------------FWR-LLVASLVMLVFGYLGE---A------G--I-----------M----------------------GT------MPA-FIIAMAGWLYILYEI-----F--A-GEASKANAG--S-GNAAG-Q-Q-A-F-R-AL-CLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-env5]_KJ928696 [I-env5] PRGD_OTU047_c962fe9710ebcb7b5158990b2f2453b2 gb|KJ928696| PRGD_OTU047_c962fe9710ebcb7b5158990b2f2453b2, putative proteorhodopsin gene, partial cds. PRGD_OTU047_c962fe9710ebcb7b5158990b2f2453b2, putative proteorhodopsin gene, partial cds. KJ928696 [[proteorhodopsin super-cluster I/env cluster 5]] proteorhodopsin super-cluster I env cluster 5 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) TTAATTACAGTCCCACTTCAAATTATTGAATTTTATGTAATTCTTGCTGCTGTTACTACTGTTGCGGCTGCCTTATTCTGGAGATTATTAGTTGCCTCTTTGGTAATGCTAGTCTTTGGATATTTAGGTGAAGCTGGAATTATGGGCACAATGCCTGCATTCATTATTGCAATGGCAGGTTGGTTGTACATCCTATATGAAATCTTTGCTGGTGAAGCTAGTAAAGCAAACGCTGGCAGTGGAAACGCAGCGGGTCAACAAGCTTTTAGAGCACTATGTTTAATAGTGACTATT LITVPLQIIEFYVILAAVTTVAAALFWRLLVASLVMLVFGYLGEAGIMGTMPAFIIAMAGWLYILYEIFAGEASKANAGSGNAAGQQAFRALCLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTCCCACTTCAAATTATTGAATTTTATGTAATTCTTGCTGCT---------GTT---ACTACTGTTGCGGCT---GCCTTA------------------------------------TTCTGGAGA---TTATTAGTTGCCTCTTTGGTAATGCTAGTCTTTGGATATTTAGGTGAA---------GCT------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------GGCACA------------------ATGCCTGCA---TTCATTATTGCAATGGCAGGTTGGTTGTACATCCTATATGAAATC---------------TTT------GCT---GGTGAAGCTAGTAAAGCAAACGCTGGC------AGT---GGAAACGCAGCGGGT---CAA---CAA---GCT---TTT---AGA---GCACTA---TGTTTAATAGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYVILAA---V-TTVAA-AL------------FWR-LLVASLVMLVFGYLGE---A------G--I-----------M----------------------GT------MPA-FIIAMAGWLYILYEI-----F--A-GEASKANAG--S-GNAAG-Q-Q-A-F-R-AL-CLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-env5]_KJ928685 [I-env5] PRGD_OTU047_3a4b8d609aae4e27d361c149a9348d53 gb|KJ928685| PRGD_OTU047_3a4b8d609aae4e27d361c149a9348d53, putative proteorhodopsin gene, partial cds. PRGD_OTU047_3a4b8d609aae4e27d361c149a9348d53, putative proteorhodopsin gene, partial cds. KJ928685 [[proteorhodopsin super-cluster I/env cluster 5]] proteorhodopsin super-cluster I env cluster 5 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACAGTGCCACTTCAAATTATTGAATTTTATGTAATTCTTGCTGCTGTTACTACTGTTGCAGCTGCTTTATTCTGGAGATTATTAGTTGCCTCATTGGTAATGTTAATTTTTGGATACCTAGGTGAAGCTGGAATTATGAACGCAATGCCTGCATTTATAATTGGAATGGCAGGTTGGTTGTACATCCTTTATGAGATCTTTGCTGGTGAAGCTAGTAAAGCCAACGCTGGCAGTGGAAACGCAGCGGGTCAACAAGCTTTTAGAGCACTATGTCTGATAGTGACTATT LITVPLQIIEFYVILAAVTTVAAALFWRLLVASLVMLIFGYLGEAGIMNAMPAFIIGMAGWLYILYEIFAGEASKANAGSGNAAGQQAFRALCLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCACTTCAAATTATTGAATTTTATGTAATTCTTGCTGCT---------GTT---ACTACTGTTGCAGCT---GCTTTA------------------------------------TTCTGGAGA---TTATTAGTTGCCTCATTGGTAATGTTAATTTTTGGATACCTAGGTGAA---------GCT------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------AACGCA------------------ATGCCTGCA---TTTATAATTGGAATGGCAGGTTGGTTGTACATCCTTTATGAGATC---------------TTT------GCT---GGTGAAGCTAGTAAAGCCAACGCTGGC------AGT---GGAAACGCAGCGGGT---CAA---CAA---GCT---TTT---AGA---GCACTA---TGTCTGATAGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYVILAA---V-TTVAA-AL------------FWR-LLVASLVMLIFGYLGE---A------G--I-----------M----------------------NA------MPA-FIIGMAGWLYILYEI-----F--A-GEASKANAG--S-GNAAG-Q-Q-A-F-R-AL-CLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-env5]_KJ928700 [I-env5] PRGD_OTU047_fc7fcfa2877dbd77c8de21ca8e38d1fe gb|KJ928700| PRGD_OTU047_fc7fcfa2877dbd77c8de21ca8e38d1fe, putative proteorhodopsin gene, partial cds. PRGD_OTU047_fc7fcfa2877dbd77c8de21ca8e38d1fe, putative proteorhodopsin gene, partial cds. KJ928700 [[proteorhodopsin super-cluster I/env cluster 5]] proteorhodopsin super-cluster I env cluster 5 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTGCCACTTCAAATTATCGAATTTTATGTAATTCTTGCTGCTGTTACTACTGTTGCAGCTGCTCTATTCTGGAGATTATTAGTTGCTTCGTTAGTAATGTTAATTTTTGGATACTTAGGTGAAGCTGGAATTATGAACGCAATGCCTGCATTTATAATTGGAATGGCAGGTTGGTTGTACATCCTTTATGAGATCTTTGCTGGTGAAGCTAGTAAAGCAAACGCTGGCAGTGGAAACGCAGCGGGTCAACAAGCTTTTAGAGCACTATGTCTGATAGTGACTATT LITVPLQIIEFYVILAAVTTVAAALFWRLLVASLVMLIFGYLGEAGIMNAMPAFIIGMAGWLYILYEIFAGEASKANAGSGNAAGQQAFRALCLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCACTTCAAATTATCGAATTTTATGTAATTCTTGCTGCT---------GTT---ACTACTGTTGCAGCT---GCTCTA------------------------------------TTCTGGAGA---TTATTAGTTGCTTCGTTAGTAATGTTAATTTTTGGATACTTAGGTGAA---------GCT------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------AACGCA------------------ATGCCTGCA---TTTATAATTGGAATGGCAGGTTGGTTGTACATCCTTTATGAGATC---------------TTT------GCT---GGTGAAGCTAGTAAAGCAAACGCTGGC------AGT---GGAAACGCAGCGGGT---CAA---CAA---GCT---TTT---AGA---GCACTA---TGTCTGATAGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYVILAA---V-TTVAA-AL------------FWR-LLVASLVMLIFGYLGE---A------G--I-----------M----------------------NA------MPA-FIIGMAGWLYILYEI-----F--A-GEASKANAG--S-GNAAG-Q-Q-A-F-R-AL-CLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-env5]_KJ928691 [I-env5] PRGD_OTU047_61b8c78ac0d94e7904fd1c7e16c270f6 gb|KJ928691| PRGD_OTU047_61b8c78ac0d94e7904fd1c7e16c270f6, putative proteorhodopsin gene, partial cds. PRGD_OTU047_61b8c78ac0d94e7904fd1c7e16c270f6, putative proteorhodopsin gene, partial cds. KJ928691 [[proteorhodopsin super-cluster I/env cluster 5]] proteorhodopsin super-cluster I env cluster 5 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683) TTAATTACAGTACCACTTCAAATTATCGAATTTTATGTAATTCTTGCTGCTGTTACTACCGTTGCAGCTGCCCTATTCTGGAGATTATTAGTTGCTTCATTAGTGATGTTAATTTTTGGATATTTAGGTGAAGCTGGAATTATGAACGCAATGCCTGCATTTATAATAGGAATGGCAGGTTGGTTGTACATCCTTTATGAGATCTTTGCTGGGGAAGCTAGTAAAGCAAATGCTGGCAGTGGAAACGCAGCGGGTCAACAAGCTTTTAGAGCACTATGTCTGATAGTGACTATT LITVPLQIIEFYVILAAVTTVAAALFWRLLVASLVMLIFGYLGEAGIMNAMPAFIIGMAGWLYILYEIFAGEASKANAGSGNAAGQQAFRALCLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTACCACTTCAAATTATCGAATTTTATGTAATTCTTGCTGCT---------GTT---ACTACCGTTGCAGCT---GCCCTA------------------------------------TTCTGGAGA---TTATTAGTTGCTTCATTAGTGATGTTAATTTTTGGATATTTAGGTGAA---------GCT------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------AACGCA------------------ATGCCTGCA---TTTATAATAGGAATGGCAGGTTGGTTGTACATCCTTTATGAGATC---------------TTT------GCT---GGGGAAGCTAGTAAAGCAAATGCTGGC------AGT---GGAAACGCAGCGGGT---CAA---CAA---GCT---TTT---AGA---GCACTA---TGTCTGATAGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYVILAA---V-TTVAA-AL------------FWR-LLVASLVMLIFGYLGE---A------G--I-----------M----------------------NA------MPA-FIIGMAGWLYILYEI-----F--A-GEASKANAG--S-GNAAG-Q-Q-A-F-R-AL-CLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-env5]_KJ928692 [I-env5] PRGD_OTU047_87cdf406a05d41488783a4ef24583042 gb|KJ928692| PRGD_OTU047_87cdf406a05d41488783a4ef24583042, putative proteorhodopsin gene, partial cds. PRGD_OTU047_87cdf406a05d41488783a4ef24583042, putative proteorhodopsin gene, partial cds. KJ928692 [[proteorhodopsin super-cluster I/env cluster 5]] proteorhodopsin super-cluster I env cluster 5 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) TTAATTACAGTACCACTTCAAATTATCGAATTTTATGTAATTCTTGCTGCTGTTACTACCGTTGCAGCTGCTTTATTCTGGAGATTATTAGTTGCTTCATTAGTGATGTTAATTTTTGGATACCTAGGTGAAGCTGGAATTATGAACGCAATGCCTGCATTTATAATAGGAATGGCAGGTTGGTTGTACATCCTTTATGAGATCTTTGCTGGGGAAGCTAGTAAAGCAAATGCTGGCAGTGGAAACGCAGCGGGTCAACAAGCTTTTAGAGCACTATGTCTGATAGTGACTATT LITVPLQIIEFYVILAAVTTVAAALFWRLLVASLVMLIFGYLGEAGIMNAMPAFIIGMAGWLYILYEIFAGEASKANAGSGNAAGQQAFRALCLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTACCACTTCAAATTATCGAATTTTATGTAATTCTTGCTGCT---------GTT---ACTACCGTTGCAGCT---GCTTTA------------------------------------TTCTGGAGA---TTATTAGTTGCTTCATTAGTGATGTTAATTTTTGGATACCTAGGTGAA---------GCT------------------GGA------ATT---------------------------------ATG------------------------------------------------------------------AACGCA------------------ATGCCTGCA---TTTATAATAGGAATGGCAGGTTGGTTGTACATCCTTTATGAGATC---------------TTT------GCT---GGGGAAGCTAGTAAAGCAAATGCTGGC------AGT---GGAAACGCAGCGGGT---CAA---CAA---GCT---TTT---AGA---GCACTA---TGTCTGATAGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYVILAA---V-TTVAA-AL------------FWR-LLVASLVMLIFGYLGE---A------G--I-----------M----------------------NA------MPA-FIIGMAGWLYILYEI-----F--A-GEASKANAG--S-GNAAG-Q-Q-A-F-R-AL-CLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-env5]_KJ928693 [I-env5] PRGD_OTU047_ab60e0c0ff55c548ac02ea81b3af4d4e gb|KJ928693| PRGD_OTU047_ab60e0c0ff55c548ac02ea81b3af4d4e, putative proteorhodopsin gene, partial cds. PRGD_OTU047_ab60e0c0ff55c548ac02ea81b3af4d4e, putative proteorhodopsin gene, partial cds. KJ928693 [[proteorhodopsin super-cluster I/env cluster 5]] proteorhodopsin super-cluster I env cluster 5 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTAATTACAGTGCCACTTCAAATTATTGAATTTTATGTAATCCTTGCTGCAGTGACTACTGTTGCAGCCGCTTTATTCTGGAGATTATTAGTTGCTTCATTAGTAATGTTAATCTTTGGTTATTTAGGTGAAGCAGGGATGATGGGTACAATGCCTGCATTTATTATTGCAATGGCTGGCTGGTTGTACATCCTTTATGAGATCTTTGCAGGTGAAGCTAGTAAAGCAAATGCTGGTAGTGGAAATGCTGCAGGTCAACAAGCTTTTAGAGCACTATGTCTGATAGTGACTATT LITVPLQIIEFYVILAAVTTVAAALFWRLLVASLVMLIFGYLGEAGMMGTMPAFIIAMAGWLYILYEIFAGEASKANAGSGNAAGQQAFRALCLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCACTTCAAATTATTGAATTTTATGTAATCCTTGCTGCA---------GTG---ACTACTGTTGCAGCC---GCTTTA------------------------------------TTCTGGAGA---TTATTAGTTGCTTCATTAGTAATGTTAATCTTTGGTTATTTAGGTGAA---------GCA------------------GGG------ATG---------------------------------ATG------------------------------------------------------------------GGTACA------------------ATGCCTGCA---TTTATTATTGCAATGGCTGGCTGGTTGTACATCCTTTATGAGATC---------------TTT------GCA---GGTGAAGCTAGTAAAGCAAATGCTGGT------AGT---GGAAATGCTGCAGGT---CAA---CAA---GCT---TTT---AGA---GCACTA---TGTCTGATAGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIIEFYVILAA---V-TTVAA-AL------------FWR-LLVASLVMLIFGYLGE---A------G--M-----------M----------------------GT------MPA-FIIAMAGWLYILYEI-----F--A-GEASKANAG--S-GNAAG-Q-Q-A-F-R-AL-CLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-env5]_KJ928688 [I-env5] PRGD_OTU047_51bdca2c9adbf89a371f627342fd0e5d gb|KJ928688| PRGD_OTU047_51bdca2c9adbf89a371f627342fd0e5d, putative proteorhodopsin gene, partial cds. PRGD_OTU047_51bdca2c9adbf89a371f627342fd0e5d, putative proteorhodopsin gene, partial cds. KJ928688 [[proteorhodopsin super-cluster I/env cluster 5]] proteorhodopsin super-cluster I env cluster 5 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-33.28, 45.35) TTGATAACAGTACCACTTCAAATTGTTGAATTTTATGTAATTCTTGCTGCTGTGACCGCTGTTGCGGCCGGCCTGTTCTGGAGACTATTAGTTGCTTCTTTAGTAATGTTAGTTTTTGGTTATCTAGGTGAAGCAGAAATAATGCCAGTTCTACCTGCATTTATAATTGGAATGGCAGGTTGGTTGTACATTCTTTATGAGATCTTTGCAGGTGAAGCTAGTAAAGCAAATGCTGCTAGTGGAAATGCTGCAGGTCAACAAGCTTTTAGAGCACTATGTCTGATAGTGACTATT LITVPLQIVEFYVILAAVTAVAAGLFWRLLVASLVMLVFGYLGEAEIMPVLPAFIIGMAGWLYILYEIFAGEASKANAASGNAAGQQAFRALCLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACAGTACCACTTCAAATTGTTGAATTTTATGTAATTCTTGCTGCT---------GTG---ACCGCTGTTGCGGCC---GGCCTG------------------------------------TTCTGGAGA---CTATTAGTTGCTTCTTTAGTAATGTTAGTTTTTGGTTATCTAGGTGAA---------GCA------------------GAA------ATA---------------------------------ATG------------------------------------------------------------------CCAGTT------------------CTACCTGCA---TTTATAATTGGAATGGCAGGTTGGTTGTACATTCTTTATGAGATC---------------TTT------GCA---GGTGAAGCTAGTAAAGCAAATGCTGCT------AGT---GGAAATGCTGCAGGT---CAA---CAA---GCT---TTT---AGA---GCACTA---TGTCTGATAGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---V-TAVAA-GL------------FWR-LLVASLVMLVFGYLGE---A------E--I-----------M----------------------PV------LPA-FIIGMAGWLYILYEI-----F--A-GEASKANAA--S-GNAAG-Q-Q-A-F-R-AL-CLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-env5]_KJ928697 [I-env5] PRGD_OTU047_d6cbb7054ac6cfaa7924ef69e51feef2 gb|KJ928697| PRGD_OTU047_d6cbb7054ac6cfaa7924ef69e51feef2, putative proteorhodopsin gene, partial cds. PRGD_OTU047_d6cbb7054ac6cfaa7924ef69e51feef2, putative proteorhodopsin gene, partial cds. KJ928697 [[proteorhodopsin super-cluster I/env cluster 5]] proteorhodopsin super-cluster I env cluster 5 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTGATAACAGTACCACTTCAAATTGTTGAATTTTATGTAATTCTTGCTGCTGTGACCGCTGTTGCGGCCGGCCTGTTCTGGAGACTATTAGTTGCTTCTTTAGTAATGTTAGTTTTTGGTTATCTAGGTGAAGCAGAAATAATGCCATATTTGCCTGCATTTATAATTGGAATGGCAGGTTGGTTGTACATTCTTTATGAGATCTTTGCAGGTGAAGCTAGTAAAGCAAATGCTGCTAGTGGAAATGCTGCAGGTCAACAAGCGTTTAGAGCACTATGTCTGATAGTGACTATC LITVPLQIVEFYVILAAVTAVAAGLFWRLLVASLVMLVFGYLGEAEIMPYLPAFIIGMAGWLYILYEIFAGEASKANAASGNAAGQQAFRALCLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACAGTACCACTTCAAATTGTTGAATTTTATGTAATTCTTGCTGCT---------GTG---ACCGCTGTTGCGGCC---GGCCTG------------------------------------TTCTGGAGA---CTATTAGTTGCTTCTTTAGTAATGTTAGTTTTTGGTTATCTAGGTGAA---------GCA------------------GAA------ATA---------------------------------ATG------------------------------------------------------------------CCATAT------------------TTGCCTGCA---TTTATAATTGGAATGGCAGGTTGGTTGTACATTCTTTATGAGATC---------------TTT------GCA---GGTGAAGCTAGTAAAGCAAATGCTGCT------AGT---GGAAATGCTGCAGGT---CAA---CAA---GCG---TTT---AGA---GCACTA---TGTCTGATAGTGACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---V-TAVAA-GL------------FWR-LLVASLVMLVFGYLGE---A------E--I-----------M----------------------PY------LPA-FIIGMAGWLYILYEI-----F--A-GEASKANAA--S-GNAAG-Q-Q-A-F-R-AL-CLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-env5]_KJ928690 [I-env5] PRGD_OTU047_55700c078ff37dd137df12f8dd474590 gb|KJ928690| PRGD_OTU047_55700c078ff37dd137df12f8dd474590, putative proteorhodopsin gene, partial cds. PRGD_OTU047_55700c078ff37dd137df12f8dd474590, putative proteorhodopsin gene, partial cds. KJ928690 [[proteorhodopsin super-cluster I/env cluster 5]] proteorhodopsin super-cluster I env cluster 5 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) TTGATAACAGTACCACTTCAAATTGTTGAATTTTATGTAATTCTTGCTGCTGTGACTACTGTTGCTGCTGGCCTATTTTGGAGATTATTAGTTGCTTCTTTAGTAATGCTAATCTTTGGTTACTTAGGTGAGGCAGAAATAATGCCACATATGCCTGCATTTATAATTGGAATGGCAGGTTGGTTGTACATTCTTTATGAGATCTTTGCAGGTGAAGCTAGTAAAGCAAACGCTAGTAGTGGAAATGCTGCGGGTCAACAAGCTTTTAGAGCACTATGTTTGATAGTCACTATT LITVPLQIVEFYVILAAVTTVAAGLFWRLLVASLVMLIFGYLGEAEIMPHMPAFIIGMAGWLYILYEIFAGEASKANASSGNAAGQQAFRALCLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACAGTACCACTTCAAATTGTTGAATTTTATGTAATTCTTGCTGCT---------GTG---ACTACTGTTGCTGCT---GGCCTA------------------------------------TTTTGGAGA---TTATTAGTTGCTTCTTTAGTAATGCTAATCTTTGGTTACTTAGGTGAG---------GCA------------------GAA------ATA---------------------------------ATG------------------------------------------------------------------CCACAT------------------ATGCCTGCA---TTTATAATTGGAATGGCAGGTTGGTTGTACATTCTTTATGAGATC---------------TTT------GCA---GGTGAAGCTAGTAAAGCAAACGCTAGT------AGT---GGAAATGCTGCGGGT---CAA---CAA---GCT---TTT---AGA---GCACTA---TGTTTGATAGTCACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---V-TTVAA-GL------------FWR-LLVASLVMLIFGYLGE---A------E--I-----------M----------------------PH------MPA-FIIGMAGWLYILYEI-----F--A-GEASKANAS--S-GNAAG-Q-Q-A-F-R-AL-CLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-env5]_KJ928698 [I-env5] PRGD_OTU047_e10b695b09f1c666cfb18551a317e378 gb|KJ928698| PRGD_OTU047_e10b695b09f1c666cfb18551a317e378, putative proteorhodopsin gene, partial cds. PRGD_OTU047_e10b695b09f1c666cfb18551a317e378, putative proteorhodopsin gene, partial cds. KJ928698 [[proteorhodopsin super-cluster I/env cluster 5]] proteorhodopsin super-cluster I env cluster 5 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGATAACAGTACCACTTCAAATTGTTGAATTTTATGTAATTCTTGCTGCTGTGACTACTGTTGCTGCTGGCCTATTTTGGAGATTATTAGTTGCTTCTTTAGTCATGTTAATTTTTGGCTATTTAGGTGAGGCAGAAATAATGCCACATATGCCTGCATTTATAATTGGAATGGCAGGTTGGTTGTACATTCTTTATGAGATCTTTGCAGGTGAAGCTAGTAAAGCAAATGCTGGCAGTGGAAATGCTGCAGGTCAACAGGCTTTTAGAGCACTATGTCTGATAGTGACTATT LITVPLQIVEFYVILAAVTTVAAGLFWRLLVASLVMLIFGYLGEAEIMPHMPAFIIGMAGWLYILYEIFAGEASKANAGSGNAAGQQAFRALCLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAACAGTACCACTTCAAATTGTTGAATTTTATGTAATTCTTGCTGCT---------GTG---ACTACTGTTGCTGCT---GGCCTA------------------------------------TTTTGGAGA---TTATTAGTTGCTTCTTTAGTCATGTTAATTTTTGGCTATTTAGGTGAG---------GCA------------------GAA------ATA---------------------------------ATG------------------------------------------------------------------CCACAT------------------ATGCCTGCA---TTTATAATTGGAATGGCAGGTTGGTTGTACATTCTTTATGAGATC---------------TTT------GCA---GGTGAAGCTAGTAAAGCAAATGCTGGC------AGT---GGAAATGCTGCAGGT---CAA---CAG---GCT---TTT---AGA---GCACTA---TGTCTGATAGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYVILAA---V-TTVAA-GL------------FWR-LLVASLVMLIFGYLGE---A------E--I-----------M----------------------PH------MPA-FIIGMAGWLYILYEI-----F--A-GEASKANAG--S-GNAAG-Q-Q-A-F-R-AL-CLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-env5]_KJ929755 [I-env5] PRGD_OTU229_8dff16f52f4866d02166455dd5e5c94c gb|KJ929755| PRGD_OTU229_8dff16f52f4866d02166455dd5e5c94c, putative proteorhodopsin gene, partial cds. PRGD_OTU229_8dff16f52f4866d02166455dd5e5c94c, putative proteorhodopsin gene, partial cds. KJ929755 [[proteorhodopsin super-cluster I/env cluster 5]] proteorhodopsin super-cluster I env cluster 5 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTAATTACAGTGCCACTTCAAATCGTAGAGTTTTATCTTATTTTAGCTGCAGTAACTACAGTTAGATCAAGCCTATTCTGGAAACTATTAATTGCTTCTTTAGTAATGCTAGTATTTGGATACCTAGGCGAGATTGGCGCTATGAATGTAATGACTGCATTTGTCATCGGTATGGCAGGCTGGTTATACATCGTTTATGAAGTCTTTGCTGGTGAAGCTAGTCAAGCTAATGCTGGTAGTGGCAATGCCGCAGGACAAATGGCGTTTAAAACTTTAGCTCTGATAGTTACAGTA LITVPLQIVEFYLILAAVTTVRSSLFWKLLIASLVMLVFGYLGEIGAMNVMTAFVIGMAGWLYIVYEVFAGEASQANAGSGNAAGQMAFKTLALIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTGCCACTTCAAATCGTAGAGTTTTATCTTATTTTAGCTGCA---------GTA---ACTACAGTTAGATCA---AGCCTA------------------------------------TTCTGGAAA---CTATTAATTGCTTCTTTAGTAATGCTAGTATTTGGATACCTAGGCGAG---------ATT------------------GGC------GCT---------------------------------ATG------------------------------------------------------------------AATGTA------------------ATGACTGCA---TTTGTCATCGGTATGGCAGGCTGGTTATACATCGTTTATGAAGTC---------------TTT------GCT---GGTGAAGCTAGTCAAGCTAATGCTGGT------AGT---GGCAATGCCGCAGGA---CAA---ATG---GCG---TTT---AAA---ACTTTA---GCTCTGATAGTTACAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TTVRS-SL------------FWK-LLIASLVMLVFGYLGE---I------G--A-----------M----------------------NV------MTA-FVIGMAGWLYIVYEV-----F--A-GEASQANAG--S-GNAAG-Q-M-A-F-K-TL-ALIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-env5]_KJ929754 [I-env5] PRGD_OTU229_otuREP_96375b7b802c6d9e201dd8de1bde37d8 gb|KJ929754| PRGD_OTU229_otuREP_96375b7b802c6d9e201dd8de1bde37d8, putative proteorhodopsin gene, partial cds. PRGD_OTU229_otuREP_96375b7b802c6d9e201dd8de1bde37d8, putative proteorhodopsin gene, partial cds. KJ929754 [[proteorhodopsin super-cluster I/env cluster 5]] proteorhodopsin super-cluster I env cluster 5 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) CTAATTACAGTGCCACTTCAAATTGTAGAGTTTTATCTTATTTTAGCTGCAGTAACTACAGTTAGATCAAGCCTATTCTGGAAACTATTAATTGCTTCTTTAGTAATGCTAGTATTTGGATACCTAGGTGAGATTGGAGCTATGAATGTAATGACTGCATTTGTCATCGGTATGGCAGGCTGGTTATACATCGTTTATGAAGTCTTTGCTGGTGAAGCTAGTCAAGCTAATGCCGGTAGTGGCAATGCCGCAGGACAAATGGCGTTTAAAACTTTAGCTCTGATAGTTACGGTA LITVPLQIVEFYLILAAVTTVRSSLFWKLLIASLVMLVFGYLGEIGAMNVMTAFVIGMAGWLYIVYEVFAGEASQANAGSGNAAGQMAFKTLALIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTGCCACTTCAAATTGTAGAGTTTTATCTTATTTTAGCTGCA---------GTA---ACTACAGTTAGATCA---AGCCTA------------------------------------TTCTGGAAA---CTATTAATTGCTTCTTTAGTAATGCTAGTATTTGGATACCTAGGTGAG---------ATT------------------GGA------GCT---------------------------------ATG------------------------------------------------------------------AATGTA------------------ATGACTGCA---TTTGTCATCGGTATGGCAGGCTGGTTATACATCGTTTATGAAGTC---------------TTT------GCT---GGTGAAGCTAGTCAAGCTAATGCCGGT------AGT---GGCAATGCCGCAGGA---CAA---ATG---GCG---TTT---AAA---ACTTTA---GCTCTGATAGTTACGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---V-TTVRS-SL------------FWK-LLIASLVMLVFGYLGE---I------G--A-----------M----------------------NV------MTA-FVIGMAGWLYIVYEV-----F--A-GEASQANAG--S-GNAAG-Q-M-A-F-K-TL-ALIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Delta-SAR324]_KJ929244 [I-Delta-SAR324] PRGD_OTU092_83d69f7807f5bdb4956706fb4a80dc00 gb|KJ929244| PRGD_OTU092_83d69f7807f5bdb4956706fb4a80dc00, putative proteorhodopsin gene, partial cds. PRGD_OTU092_83d69f7807f5bdb4956706fb4a80dc00, putative proteorhodopsin gene, partial cds. KJ929244 [[proteorhodopsin super-cluster I/Deltaproteobacterial-like cluster/SAR324-like subcluster]] proteorhodopsin super-cluster I Deltaproteobacterial-like cluster SAR324-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TTACTGACAGTTCCACTACAAATTGTGGAATTTTATTTGATATTGGCAGCAATTGCAGCTGTGCCAATAATACTTTTTTGGAGGCTTCTGGTCTACTCTCTCATCATGCTGATCTTTGGTTATCTGGGTGAAGCTGGTTTTATAGATGTAACTCTGGGATTTATTCTGGGAATGGTTGGATGGCTTCTAATTCTTTATGAAATCTTTTTCGGTGAAGCTAGTCAAATCAATGCGAATTCTGCAAATATATCTTGTCAAAAAGCTTTCCATGCACTACGCCTTATCGTGACTGTA LLTVPLQIVEFYLILAAIAAVPIILFWRLLVYSLIMLIFGYLGEAGFIDVTLGFILGMVGWLLILYEIFFGEASQINANSANISCQKAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTGACAGTTCCACTACAAATTGTGGAATTTTATTTGATATTGGCAGCA---------ATT---GCAGCTGTGCCAATA---ATACTT------------------------------------TTTTGGAGG---CTTCTGGTCTACTCTCTCATCATGCTGATCTTTGGTTATCTGGGTGAA---------GCT------------------GGT------TTT---------------------------------ATA------------------------------------------------------------------GATGTA------------------ACTCTGGGA---TTTATTCTGGGAATGGTTGGATGGCTTCTAATTCTTTATGAAATC---------------TTT------TTC---GGTGAAGCTAGTCAAATCAATGCGAAT------TCT---GCAAATATATCTTGT---CAA---AAA---GCT---TTC---CAT---GCACTA---CGCCTTATCGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AAVPI-IL------------FWR-LLVYSLIMLIFGYLGE---A------G--F-----------I----------------------DV------TLG-FILGMVGWLLILYEI-----F--F-GEASQINAN--S-ANISC-Q-K-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Delta-SAR324]_KJ929247 [I-Delta-SAR324] PRGD_OTU092_ecedcafd2b4dff600e147d3dbec50da6 gb|KJ929247| PRGD_OTU092_ecedcafd2b4dff600e147d3dbec50da6, putative proteorhodopsin gene, partial cds. PRGD_OTU092_ecedcafd2b4dff600e147d3dbec50da6, putative proteorhodopsin gene, partial cds. KJ929247 [[proteorhodopsin super-cluster I/Deltaproteobacterial-like cluster/SAR324-like subcluster]] proteorhodopsin super-cluster I Deltaproteobacterial-like cluster SAR324-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45; -33.28, 45.35) TTACTGACAGTTCCACTACAAATTGTGGAATTTTATTTGATATTGGCAGCAATTGCAGCTGTGCCAATAATACTTTTTTGGAGGCTTCTGGTCTACTCTCTCATCATGCTGATCTTTGGTTATCTGGGTGAAGCTGGTTTTATAGATGTAACTCTGGGATTTGTTCTGGGAATGGTTGGATGGCTTCTAATTCTTTATGAAATCTTTTTCGGTGAAGCTAGTCGAATCAATGCGAATTCTGCAAATATATCTTGTCAAAAAGCTTTCCATGCACTACGACTTATCGTGACTGTA LLTVPLQIVEFYLILAAIAAVPIILFWRLLVYSLIMLIFGYLGEAGFIDVTLGFVLGMVGWLLILYEIFFGEASRINANSANISCQKAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTGACAGTTCCACTACAAATTGTGGAATTTTATTTGATATTGGCAGCA---------ATT---GCAGCTGTGCCAATA---ATACTT------------------------------------TTTTGGAGG---CTTCTGGTCTACTCTCTCATCATGCTGATCTTTGGTTATCTGGGTGAA---------GCT------------------GGT------TTT---------------------------------ATA------------------------------------------------------------------GATGTA------------------ACTCTGGGA---TTTGTTCTGGGAATGGTTGGATGGCTTCTAATTCTTTATGAAATC---------------TTT------TTC---GGTGAAGCTAGTCGAATCAATGCGAAT------TCT---GCAAATATATCTTGT---CAA---AAA---GCT---TTC---CAT---GCACTA---CGACTTATCGTGACTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AAVPI-IL------------FWR-LLVYSLIMLIFGYLGE---A------G--F-----------I----------------------DV------TLG-FVLGMVGWLLILYEI-----F--F-GEASRINAN--S-ANISC-Q-K-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Delta-SAR324]_KJ929240 [I-Delta-SAR324] PRGD_OTU092_otuREP_eae1379833bcf7e70abbd937d82b6763 gb|KJ929240| PRGD_OTU092_otuREP_eae1379833bcf7e70abbd937d82b6763, putative proteorhodopsin gene, partial cds. PRGD_OTU092_otuREP_eae1379833bcf7e70abbd937d82b6763, putative proteorhodopsin gene, partial cds. KJ929240 [[proteorhodopsin super-cluster I/Deltaproteobacterial-like cluster/SAR324-like subcluster]] proteorhodopsin super-cluster I Deltaproteobacterial-like cluster SAR324-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTACTGACAGTTCCACTACAAATTGTGGAATTTTATTTGATATTGGCAGCAATTGCAGCTGTGCCAATAATACTTTTTTGGAGGCTTCTGGTCTACTCTCTCATCATGCTGATCTTTGGTTATCTGGGTGAAGCTGGTTTTGTAGATGTAACTCTGGGATTTATTCTGGGAATGGTTGGATGGCTTCTAATTCTTTATGAAATCTTTTTCGGTGAAGCTAGTCAAATCAATGCGAATTCTGCAAATACATCTTGTCAAAAAGCTTTCCACGCACTACGCCTTATCGTGACTGTG LLTVPLQIVEFYLILAAIAAVPIILFWRLLVYSLIMLIFGYLGEAGFVDVTLGFILGMVGWLLILYEIFFGEASQINANSANTSCQKAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTGACAGTTCCACTACAAATTGTGGAATTTTATTTGATATTGGCAGCA---------ATT---GCAGCTGTGCCAATA---ATACTT------------------------------------TTTTGGAGG---CTTCTGGTCTACTCTCTCATCATGCTGATCTTTGGTTATCTGGGTGAA---------GCT------------------GGT------TTT---------------------------------GTA------------------------------------------------------------------GATGTA------------------ACTCTGGGA---TTTATTCTGGGAATGGTTGGATGGCTTCTAATTCTTTATGAAATC---------------TTT------TTC---GGTGAAGCTAGTCAAATCAATGCGAAT------TCT---GCAAATACATCTTGT---CAA---AAA---GCT---TTC---CAC---GCACTA---CGCCTTATCGTGACTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AAVPI-IL------------FWR-LLVYSLIMLIFGYLGE---A------G--F-----------V----------------------DV------TLG-FILGMVGWLLILYEI-----F--F-GEASQINAN--S-ANTSC-Q-K-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Delta-SAR324]_KJ929245 [I-Delta-SAR324] PRGD_OTU092_b4bf96d1b3132ae48b5574e4725ed48a gb|KJ929245| PRGD_OTU092_b4bf96d1b3132ae48b5574e4725ed48a, putative proteorhodopsin gene, partial cds. PRGD_OTU092_b4bf96d1b3132ae48b5574e4725ed48a, putative proteorhodopsin gene, partial cds. KJ929245 [[proteorhodopsin super-cluster I/Deltaproteobacterial-like cluster/SAR324-like subcluster]] proteorhodopsin super-cluster I Deltaproteobacterial-like cluster SAR324-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTACTGACGGTTCCACTACAAATTGTGGAATTCTATTTGATATTGGCAGCAATTGCAGCTGTGCCAATAATACTTTTTTGGAGACTTCTGGTCTACTCTCTCATCATGCTGATCTTTGGTTATCTGGGTGAAGCTGGTTTTGTAGATGTAACTCTGGGATTTATTCTGGGAATGGTTGGATGGCTTCTAATTCTTTATGAAATCTTTTTCGGTGAAGCTAGTCAAATCAATGCAAATTCTGCAAATACATCTTGTCAAAAAGCTTTCCACGCACTACGCCTTATCGTGACTGTG LLTVPLQIVEFYLILAAIAAVPIILFWRLLVYSLIMLIFGYLGEAGFVDVTLGFILGMVGWLLILYEIFFGEASQINANSANTSCQKAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTGACGGTTCCACTACAAATTGTGGAATTCTATTTGATATTGGCAGCA---------ATT---GCAGCTGTGCCAATA---ATACTT------------------------------------TTTTGGAGA---CTTCTGGTCTACTCTCTCATCATGCTGATCTTTGGTTATCTGGGTGAA---------GCT------------------GGT------TTT---------------------------------GTA------------------------------------------------------------------GATGTA------------------ACTCTGGGA---TTTATTCTGGGAATGGTTGGATGGCTTCTAATTCTTTATGAAATC---------------TTT------TTC---GGTGAAGCTAGTCAAATCAATGCAAAT------TCT---GCAAATACATCTTGT---CAA---AAA---GCT---TTC---CAC---GCACTA---CGCCTTATCGTGACTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AAVPI-IL------------FWR-LLVYSLIMLIFGYLGE---A------G--F-----------V----------------------DV------TLG-FILGMVGWLLILYEI-----F--F-GEASQINAN--S-ANTSC-Q-K-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Delta-SAR324]_KJ929243 [I-Delta-SAR324] PRGD_OTU092_5db8ffa9a813f9365d488621ef9532cc gb|KJ929243| PRGD_OTU092_5db8ffa9a813f9365d488621ef9532cc, putative proteorhodopsin gene, partial cds. PRGD_OTU092_5db8ffa9a813f9365d488621ef9532cc, putative proteorhodopsin gene, partial cds. KJ929243 [[proteorhodopsin super-cluster I/Deltaproteobacterial-like cluster/SAR324-like subcluster]] proteorhodopsin super-cluster I Deltaproteobacterial-like cluster SAR324-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) TTACTGACGGTTCCACTACAAATTGTGGAATTTTATTTGATATTGGCAGCAATTGCAGCTGTGCCAATAATCCTTTTTTGGAGGCTTCTTGTCTACTCTCTCATCATGCTGATCTTTGGTTATCTGGGTGAAGCTGGTTTTGTAGATGTAACTCTGGGATTTATTCTGGGAATGGTTGGATGGCTTCTAATTCTTTATGAAATCTTTTTCGGTGAAGCTAGTCAAATCAATGCAAATTCTGCAAATACATCTTGTCAAAAAGCTTTCCGCGCACTACGCCTTATCGTGACTGTG LLTVPLQIVEFYLILAAIAAVPIILFWRLLVYSLIMLIFGYLGEAGFVDVTLGFILGMVGWLLILYEIFFGEASQINANSANTSCQKAFRALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTGACGGTTCCACTACAAATTGTGGAATTTTATTTGATATTGGCAGCA---------ATT---GCAGCTGTGCCAATA---ATCCTT------------------------------------TTTTGGAGG---CTTCTTGTCTACTCTCTCATCATGCTGATCTTTGGTTATCTGGGTGAA---------GCT------------------GGT------TTT---------------------------------GTA------------------------------------------------------------------GATGTA------------------ACTCTGGGA---TTTATTCTGGGAATGGTTGGATGGCTTCTAATTCTTTATGAAATC---------------TTT------TTC---GGTGAAGCTAGTCAAATCAATGCAAAT------TCT---GCAAATACATCTTGT---CAA---AAA---GCT---TTC---CGC---GCACTA---CGCCTTATCGTGACTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AAVPI-IL------------FWR-LLVYSLIMLIFGYLGE---A------G--F-----------V----------------------DV------TLG-FILGMVGWLLILYEI-----F--F-GEASQINAN--S-ANTSC-Q-K-A-F-R-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Delta-SAR324]_KJ929241 [I-Delta-SAR324] PRGD_OTU092_26bf4f99085215a946c1172b8b3720b3 gb|KJ929241| PRGD_OTU092_26bf4f99085215a946c1172b8b3720b3, putative proteorhodopsin gene, partial cds. PRGD_OTU092_26bf4f99085215a946c1172b8b3720b3, putative proteorhodopsin gene, partial cds. KJ929241 [[proteorhodopsin super-cluster I/Deltaproteobacterial-like cluster/SAR324-like subcluster]] proteorhodopsin super-cluster I Deltaproteobacterial-like cluster SAR324-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) TTACTGACGGTTCCACTACAGATTGTGGAATTTTATTTGATATTGGCAGCAATTGCAGCTGTGCCAATAGTACTTTTTTGGAGGCTTCTGGTCTACTCTCTCATCATGCTGATCTTTGGTTATCTGGGTGAGGCTGGTTTTATAGATGTAACTCTGGGATTTATTCTGGGAATGGTTGGATGGCTTCTGATTCTTTATGAAATCTTTTTTGGTGAAGCTAGTCAAATCAATGCAAATTCTGCAAATATATCTTGTCAAAAAGCTTTCCACGCACTGCGCCTTATCGTGACTGTG LLTVPLQIVEFYLILAAIAAVPIVLFWRLLVYSLIMLIFGYLGEAGFIDVTLGFILGMVGWLLILYEIFFGEASQINANSANISCQKAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTGACGGTTCCACTACAGATTGTGGAATTTTATTTGATATTGGCAGCA---------ATT---GCAGCTGTGCCAATA---GTACTT------------------------------------TTTTGGAGG---CTTCTGGTCTACTCTCTCATCATGCTGATCTTTGGTTATCTGGGTGAG---------GCT------------------GGT------TTT---------------------------------ATA------------------------------------------------------------------GATGTA------------------ACTCTGGGA---TTTATTCTGGGAATGGTTGGATGGCTTCTGATTCTTTATGAAATC---------------TTT------TTT---GGTGAAGCTAGTCAAATCAATGCAAAT------TCT---GCAAATATATCTTGT---CAA---AAA---GCT---TTC---CAC---GCACTG---CGCCTTATCGTGACTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AAVPI-VL------------FWR-LLVYSLIMLIFGYLGE---A------G--F-----------I----------------------DV------TLG-FILGMVGWLLILYEI-----F--F-GEASQINAN--S-ANISC-Q-K-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Delta-SAR324]_KJ929246 [I-Delta-SAR324] PRGD_OTU092_b52d9fa81acab996f640b514d65d0505 gb|KJ929246| PRGD_OTU092_b52d9fa81acab996f640b514d65d0505, putative proteorhodopsin gene, partial cds. PRGD_OTU092_b52d9fa81acab996f640b514d65d0505, putative proteorhodopsin gene, partial cds. KJ929246 [[proteorhodopsin super-cluster I/Deltaproteobacterial-like cluster/SAR324-like subcluster]] proteorhodopsin super-cluster I Deltaproteobacterial-like cluster SAR324-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTACTGACTGTTCCACTACAAATTGTGGAATTTTATTTGATATTGGCAGCAATTGCAGCTGTGCCAATAATACTTTTTTGGAGGCTTCTGGTCTACTCTCTCATCATGCTGATCTTTGGTTATCTGGGTGAAGCTGGTTTTGTAGATGTAACTCTGGGATTTATTCTGGGAATGGTTGGATGGCTTCTAATTCTTTATGAAATCTTTTTTGGTGAAGCTAGTCAAATCAATGCAAATTCTGCAAATACATCTTGTCAGAAAGCTTTCCACGCACTACGCCTTATCGTGACTGTT LLTVPLQIVEFYLILAAIAAVPIILFWRLLVYSLIMLIFGYLGEAGFVDVTLGFILGMVGWLLILYEIFFGEASQINANSANTSCQKAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTGACTGTTCCACTACAAATTGTGGAATTTTATTTGATATTGGCAGCA---------ATT---GCAGCTGTGCCAATA---ATACTT------------------------------------TTTTGGAGG---CTTCTGGTCTACTCTCTCATCATGCTGATCTTTGGTTATCTGGGTGAA---------GCT------------------GGT------TTT---------------------------------GTA------------------------------------------------------------------GATGTA------------------ACTCTGGGA---TTTATTCTGGGAATGGTTGGATGGCTTCTAATTCTTTATGAAATC---------------TTT------TTT---GGTGAAGCTAGTCAAATCAATGCAAAT------TCT---GCAAATACATCTTGT---CAG---AAA---GCT---TTC---CAC---GCACTA---CGCCTTATCGTGACTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AAVPI-IL------------FWR-LLVYSLIMLIFGYLGE---A------G--F-----------V----------------------DV------TLG-FILGMVGWLLILYEI-----F--F-GEASQINAN--S-ANTSC-Q-K-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Delta-SAR324]_KJ929242 [I-Delta-SAR324] PRGD_OTU092_2e3d89cf31f2fdd4da78afa110051ab6 gb|KJ929242| PRGD_OTU092_2e3d89cf31f2fdd4da78afa110051ab6, putative proteorhodopsin gene, partial cds. PRGD_OTU092_2e3d89cf31f2fdd4da78afa110051ab6, putative proteorhodopsin gene, partial cds. KJ929242 [[proteorhodopsin super-cluster I/Deltaproteobacterial-like cluster/SAR324-like subcluster]] proteorhodopsin super-cluster I Deltaproteobacterial-like cluster SAR324-like subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45; -33.28, 45.35) TTACTGACGGTTCCACTACAAATTGTAGAATTTTATTTGATATTGGCGGCAATTGCAGCTGTGCCAATAATACTTTTTTGGAGGCTTCTAGTCTATTCTCTCATTATGCTGATCTTTGGTTATCTGGGTGAAGCTGGTTTTGTAGATGTAACTCTGGGATTTATTCTAGGAATGGTTGGATGGCTCCTAATTCTTTATGAAATCTTTTTTGGTGAAGCTAGTCAAATCAATGCAAATTCTGCAAATACATCTTGTCAAAAAGCTTTCCATGCACTACGCCTTATCGTGACTGTG LLTVPLQIVEFYLILAAIAAVPIILFWRLLVYSLIMLIFGYLGEAGFVDVTLGFILGMVGWLLILYEIFFGEASQINANSANTSCQKAFHALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTGACGGTTCCACTACAAATTGTAGAATTTTATTTGATATTGGCGGCA---------ATT---GCAGCTGTGCCAATA---ATACTT------------------------------------TTTTGGAGG---CTTCTAGTCTATTCTCTCATTATGCTGATCTTTGGTTATCTGGGTGAA---------GCT------------------GGT------TTT---------------------------------GTA------------------------------------------------------------------GATGTA------------------ACTCTGGGA---TTTATTCTAGGAATGGTTGGATGGCTCCTAATTCTTTATGAAATC---------------TTT------TTT---GGTGAAGCTAGTCAAATCAATGCAAAT------TCT---GCAAATACATCTTGT---CAA---AAA---GCT---TTC---CAT---GCACTA---CGCCTTATCGTGACTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---I-AAVPI-IL------------FWR-LLVYSLIMLIFGYLGE---A------G--F-----------V----------------------DV------TLG-FILGMVGWLLILYEI-----F--F-GEASQINAN--S-ANTSC-Q-K-A-F-H-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [I-Delta-a]_KJ929155 [I-Delta-a] PRGD_OTU081_af6dd3b3083c448db8ee2b09e4eff73c gb|KJ929155| PRGD_OTU081_af6dd3b3083c448db8ee2b09e4eff73c, putative proteorhodopsin gene, partial cds. PRGD_OTU081_af6dd3b3083c448db8ee2b09e4eff73c, putative proteorhodopsin gene, partial cds. KJ929155 [[proteorhodopsin super-cluster I/Deltaproteobacterial-like cluster/A subcluster]] proteorhodopsin super-cluster I Deltaproteobacterial-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683) GTACTGACTGTACCATTACAAATTGTAGAATTTTATCTAATTTTGGCGGCAATAGCTACAGTTCCCATAGCATTATTTTGGAGATTACTAGTTTATTCTTTAATAATGTTGGTCTTCGGATATCTAGGTGAAGCAAATTTTATAGATGCCACTTTAGGATTTGCAATTGGTATGATTGGATGGCTTTTGATTATTTATGAGATCTTTTTAGGAGAAGCTAGTAAAATTAATGCTGATTCAGCAAACCTATCCTGTCAAAAGGCATTTAATGCGTTGAGGTTAATTGTAACCATA VLTVPLQIVEFYLILAAIATVPIALFWRLLVYSLIMLVFGYLGEANFIDATLGFAIGMIGWLLIIYEIFLGEASKINADSANLSCQKAFNALRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTACTGACTGTACCATTACAAATTGTAGAATTTTATCTAATTTTGGCGGCA---------ATA---GCTACAGTTCCCATA---GCATTA------------------------------------TTTTGGAGA---TTACTAGTTTATTCTTTAATAATGTTGGTCTTCGGATATCTAGGTGAA---------GCA------------------AAT------TTT---------------------------------ATA------------------------------------------------------------------GATGCC------------------ACTTTAGGA---TTTGCAATTGGTATGATTGGATGGCTTTTGATTATTTATGAGATC---------------TTT------TTA---GGAGAAGCTAGTAAAATTAATGCTGAT------TCA---GCAAACCTATCCTGT---CAA---AAG---GCA---TTT---AAT---GCGTTG---AGGTTAATTGTAACCATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLQIVEFYLILAA---I-ATVPI-AL------------FWR-LLVYSLIMLVFGYLGE---A------N--F-----------I----------------------DA------TLG-FAIGMIGWLLIIYEI-----F--L-GEASKINAD--S-ANLSC-Q-K-A-F-N-AL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Delta-a]_KJ929153 [I-Delta-a] PRGD_OTU081_5881c7746c17a5e9f64d4c3616e5fd62 gb|KJ929153| PRGD_OTU081_5881c7746c17a5e9f64d4c3616e5fd62, putative proteorhodopsin gene, partial cds. PRGD_OTU081_5881c7746c17a5e9f64d4c3616e5fd62, putative proteorhodopsin gene, partial cds. KJ929153 [[proteorhodopsin super-cluster I/Deltaproteobacterial-like cluster/A subcluster]] proteorhodopsin super-cluster I Deltaproteobacterial-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na GTACTGACTGTACCATTACAAATTGTAGAATTTTATCTGATTTTGGCGGCTATAGCTACAGTACCAATAGCATTATTTTGGAGATTACTAGTTTATTCTTTAATAATGTTGGTATTCGGATATCTAGGTGAGGCAAATTTTATAGATGCCACATTAGGATTTGTAATTGGTATGATTGGATGGCTTTTGATTATTTATGAGATCTTTTTAGGAGAAGCTAGTAAAATCAATGCTGATTCAGCAAACTTATCCTGTCAGAAGGCATTTAATGCTTTGAGGTTAATTGTAACCATA VLTVPLQIVEFYLILAAIATVPIALFWRLLVYSLIMLVFGYLGEANFIDATLGFVIGMIGWLLIIYEIFLGEASKINADSANLSCQKAFNALRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTACTGACTGTACCATTACAAATTGTAGAATTTTATCTGATTTTGGCGGCT---------ATA---GCTACAGTACCAATA---GCATTA------------------------------------TTTTGGAGA---TTACTAGTTTATTCTTTAATAATGTTGGTATTCGGATATCTAGGTGAG---------GCA------------------AAT------TTT---------------------------------ATA------------------------------------------------------------------GATGCC------------------ACATTAGGA---TTTGTAATTGGTATGATTGGATGGCTTTTGATTATTTATGAGATC---------------TTT------TTA---GGAGAAGCTAGTAAAATCAATGCTGAT------TCA---GCAAACTTATCCTGT---CAG---AAG---GCA---TTT---AAT---GCTTTG---AGGTTAATTGTAACCATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLQIVEFYLILAA---I-ATVPI-AL------------FWR-LLVYSLIMLVFGYLGE---A------N--F-----------I----------------------DA------TLG-FVIGMIGWLLIIYEI-----F--L-GEASKINAD--S-ANLSC-Q-K-A-F-N-AL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Delta-a]_KJ929152 [I-Delta-a] PRGD_OTU081_otuREP_354db5438b14c39095435a97b4a46336 gb|KJ929152| PRGD_OTU081_otuREP_354db5438b14c39095435a97b4a46336, putative proteorhodopsin gene, partial cds. PRGD_OTU081_otuREP_354db5438b14c39095435a97b4a46336, putative proteorhodopsin gene, partial cds. KJ929152 [[proteorhodopsin super-cluster I/Deltaproteobacterial-like cluster/A subcluster]] proteorhodopsin super-cluster I Deltaproteobacterial-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) GTACTGACTGTACCATTACAAATCGTAGAATTTTATCTAATTTTAGCGGCAATTGCTACAGTTCCCATAGCATTATTTTGGAGATTACTAGTTTATTCTTTAATAATGTTAGTGTTTGGATATTTAGGTGAAGCAAATTTTATAGATGCCACTTTAGGATTTGTAATTGGTATGATTGGATGGCTTTTGATTATTTATGAGATCTTTTTAGGAGAAGCTAGTAAAATTAATGCTGATTCAGCAAACCAATCCTGTCAAAAGGCATTTAATGCGTTGAGGTTAATTGTAACTATA VLTVPLQIVEFYLILAAIATVPIALFWRLLVYSLIMLVFGYLGEANFIDATLGFVIGMIGWLLIIYEIFLGEASKINADSANQSCQKAFNALRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTACTGACTGTACCATTACAAATCGTAGAATTTTATCTAATTTTAGCGGCA---------ATT---GCTACAGTTCCCATA---GCATTA------------------------------------TTTTGGAGA---TTACTAGTTTATTCTTTAATAATGTTAGTGTTTGGATATTTAGGTGAA---------GCA------------------AAT------TTT---------------------------------ATA------------------------------------------------------------------GATGCC------------------ACTTTAGGA---TTTGTAATTGGTATGATTGGATGGCTTTTGATTATTTATGAGATC---------------TTT------TTA---GGAGAAGCTAGTAAAATTAATGCTGAT------TCA---GCAAACCAATCCTGT---CAA---AAG---GCA---TTT---AAT---GCGTTG---AGGTTAATTGTAACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLQIVEFYLILAA---I-ATVPI-AL------------FWR-LLVYSLIMLVFGYLGE---A------N--F-----------I----------------------DA------TLG-FVIGMIGWLLIIYEI-----F--L-GEASKINAD--S-ANQSC-Q-K-A-F-N-AL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Delta-a]_KJ929154 [I-Delta-a] PRGD_OTU081_7e7b57f7f969840b4f007b9542141e37 gb|KJ929154| PRGD_OTU081_7e7b57f7f969840b4f007b9542141e37, putative proteorhodopsin gene, partial cds. PRGD_OTU081_7e7b57f7f969840b4f007b9542141e37, putative proteorhodopsin gene, partial cds. KJ929154 [[proteorhodopsin super-cluster I/Deltaproteobacterial-like cluster/A subcluster]] proteorhodopsin super-cluster I Deltaproteobacterial-like cluster A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) GTACTGACTGTACCGTTACAAATTGTAGAATTTTATCTAATTTTGGCGGCAATTGCTACAGTTCCCATAGCATTATTTTGGAGATTACTAGTTTATTCTTTAATAATGTTAGTGTTTGGATATTTAGGTGAAGCAAATTTTATAGATGCCACTTTAGGATTCGTAATTGGTATGATTGGATGGCTTTTGATTATTTATGAGATCTTTTTAGGAGAAGCTAGTAAAATTAATGCTGATTCGGCAAACCAATCCTGTCAAAAGGCATTTAATGCGTTGAGGTTAATTGTAACTATA VLTVPLQIVEFYLILAAIATVPIALFWRLLVYSLIMLVFGYLGEANFIDATLGFVIGMIGWLLIIYEIFLGEASKINADSANQSCQKAFNALRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTACTGACTGTACCGTTACAAATTGTAGAATTTTATCTAATTTTGGCGGCA---------ATT---GCTACAGTTCCCATA---GCATTA------------------------------------TTTTGGAGA---TTACTAGTTTATTCTTTAATAATGTTAGTGTTTGGATATTTAGGTGAA---------GCA------------------AAT------TTT---------------------------------ATA------------------------------------------------------------------GATGCC------------------ACTTTAGGA---TTCGTAATTGGTATGATTGGATGGCTTTTGATTATTTATGAGATC---------------TTT------TTA---GGAGAAGCTAGTAAAATTAATGCTGAT------TCG---GCAAACCAATCCTGT---CAA---AAG---GCA---TTT---AAT---GCGTTG---AGGTTAATTGTAACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLQIVEFYLILAA---I-ATVPI-AL------------FWR-LLVYSLIMLVFGYLGE---A------N--F-----------I----------------------DA------TLG-FVIGMIGWLLIIYEI-----F--L-GEASKINAD--S-ANQSC-Q-K-A-F-N-AL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma1-b]_KJ929522 [I-Gamma1-b] PRGD_OTU144_otuREP_f44714cb14942163f7a434a7b117b245 gb|KJ929522| PRGD_OTU144_otuREP_f44714cb14942163f7a434a7b117b245, putative proteorhodopsin gene, partial cds. PRGD_OTU144_otuREP_f44714cb14942163f7a434a7b117b245, putative proteorhodopsin gene, partial cds. KJ929522 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 1/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; L108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) GTACTTACTCATAGTATCCAACTGGTGCTGTTTTATTTGATTCTTAGTGCAACTACAAAAGTATCTTCGGCGCTTTTTTGGCGTCTACTCATTGGCTCTTTAGTCATGGTGGTTGGTGAATTCTTAGGTGCCGCTGGATATATGAGCAAGGCCTTAGGATTTATTATTGGAATTGTTGGTTGGCTGTATATTTTAGGTGAACTCTATATGGGTGAGGCTGGTAAAGCTAACGCGGTAAGCGACGATCAAGCTGTGCATTTTGCCTTTAATGGGCTGCGCCTTATTGTCACTATC VLTHSIQLVLFYLILSATTKVSSALFWRLLIGSLVMVVGEFLGAAGYMSKALGFIIGIVGWLYILGELYMGEAGKANAVSDDQAVHFAFNGLRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTACTTACTCATAGTATCCAACTGGTGCTGTTTTATTTGATTCTTAGTGCA---------ACT---ACAAAAGTATCTTCG---GCGCTT------------------------------------TTTTGGCGT---CTACTCATTGGCTCTTTAGTCATGGTGGTTGGTGAATTCTTAGGTGCC---------GCT------------------GGA------TAT---------------------------------ATG------------------------------------------------------------------AGCAAG------------------GCCTTAGGA---TTTATTATTGGAATTGTTGGTTGGCTGTATATTTTAGGTGAACTC---------------TAT------ATG---GGTGAGGCTGGTAAAGCTAACGCGGTA------AGC---GACGATCAAGCTGTG---CAT---TTT---GCC---TTT---AAT---GGGCTG---CGCCTTATTGTCACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTHSIQLVLFYLILSA---T-TKVSS-AL------------FWR-LLIGSLVMVVGEFLGA---A------G--Y-----------M----------------------SK------ALG-FIIGIVGWLYILGEL-----Y--M-GEAGKANAV--S-DDQAV-H-F-A-F-N-GL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma1-b]_KJ929525 [I-Gamma1-b] PRGD_OTU144_6cd38d0f0525bec14f6c7ece82cbd472 gb|KJ929525| PRGD_OTU144_6cd38d0f0525bec14f6c7ece82cbd472, putative proteorhodopsin gene, partial cds. PRGD_OTU144_6cd38d0f0525bec14f6c7ece82cbd472, putative proteorhodopsin gene, partial cds. KJ929525 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 1/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; L108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185) GTGCTTACTCATAGTATCCAACTAGTGTTGTTTTATTTGATCCTTAGCGCGACTACAAAAGTCTCTCCCGCTCTTTTTTGGCGTCTACTCATTGGCTCTTTGGTCATGGTGGTTGGAGAATTCTTGGGTGCGGCTGGATATATGAGCGAGGCCTTAGGATTTATTATTGGCATTGTGGGTTGGCTGTATATTTTGGGTGAACTCTATATGGGTGAGGCTGGTAAAGCTAACGCAGCATGTGACGATCAAGCCGTGCATTTTGCATTTAATGGGCTGCGTCTTATTGTCACTATC VLTHSIQLVLFYLILSATTKVSPALFWRLLIGSLVMVVGEFLGAAGYMSEALGFIIGIVGWLYILGELYMGEAGKANAACDDQAVHFAFNGLRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGCTTACTCATAGTATCCAACTAGTGTTGTTTTATTTGATCCTTAGCGCG---------ACT---ACAAAAGTCTCTCCC---GCTCTT------------------------------------TTTTGGCGT---CTACTCATTGGCTCTTTGGTCATGGTGGTTGGAGAATTCTTGGGTGCG---------GCT------------------GGA------TAT---------------------------------ATG------------------------------------------------------------------AGCGAG------------------GCCTTAGGA---TTTATTATTGGCATTGTGGGTTGGCTGTATATTTTGGGTGAACTC---------------TAT------ATG---GGTGAGGCTGGTAAAGCTAACGCAGCA------TGT---GACGATCAAGCCGTG---CAT---TTT---GCA---TTT---AAT---GGGCTG---CGTCTTATTGTCACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTHSIQLVLFYLILSA---T-TKVSP-AL------------FWR-LLIGSLVMVVGEFLGA---A------G--Y-----------M----------------------SE------ALG-FIIGIVGWLYILGEL-----Y--M-GEAGKANAA--C-DDQAV-H-F-A-F-N-GL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma1-b]_KJ929523 [I-Gamma1-b] PRGD_OTU144_11df4b4d44df9b1844a450b02cfd917e gb|KJ929523| PRGD_OTU144_11df4b4d44df9b1844a450b02cfd917e, putative proteorhodopsin gene, partial cds. PRGD_OTU144_11df4b4d44df9b1844a450b02cfd917e, putative proteorhodopsin gene, partial cds. KJ929523 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 1/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; L108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (67.49, -168.12), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -33.28, 45.35) GTGCTTACTCACAGTATCCAATTAGTGTTGTTTTATTTGATTCTTAGTGCCACTACAAAAGTCACCTCTGCTCTTTTTTGGCGTCTACTCATTGGCTCTTTAGTCATGGTAGTTGGCGAGTTCTTGGGTGCAGCTGGCTATATGAGTCAGGCCTTAGGATTTATTATTGGCATTGTTGGTTGGTTATATATTTTGGGTGAACTCTACATGGGTGAAGCCGGCAAAGCTAACGCAGCATGTGATGATCAAGCTGTGCATTTTGCATTTAATGGGCTGCGTCTGATTGTCACAATC VLTHSIQLVLFYLILSATTKVTSALFWRLLIGSLVMVVGEFLGAAGYMSQALGFIIGIVGWLYILGELYMGEAGKANAACDDQAVHFAFNGLRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGCTTACTCACAGTATCCAATTAGTGTTGTTTTATTTGATTCTTAGTGCC---------ACT---ACAAAAGTCACCTCT---GCTCTT------------------------------------TTTTGGCGT---CTACTCATTGGCTCTTTAGTCATGGTAGTTGGCGAGTTCTTGGGTGCA---------GCT------------------GGC------TAT---------------------------------ATG------------------------------------------------------------------AGTCAG------------------GCCTTAGGA---TTTATTATTGGCATTGTTGGTTGGTTATATATTTTGGGTGAACTC---------------TAC------ATG---GGTGAAGCCGGCAAAGCTAACGCAGCA------TGT---GATGATCAAGCTGTG---CAT---TTT---GCA---TTT---AAT---GGGCTG---CGTCTGATTGTCACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTHSIQLVLFYLILSA---T-TKVTS-AL------------FWR-LLIGSLVMVVGEFLGA---A------G--Y-----------M----------------------SQ------ALG-FIIGIVGWLYILGEL-----Y--M-GEAGKANAA--C-DDQAV-H-F-A-F-N-GL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma1-b]_KJ929524 [I-Gamma1-b] PRGD_OTU144_50b86c281fc226d9fbee329db696d696 gb|KJ929524| PRGD_OTU144_50b86c281fc226d9fbee329db696d696, putative proteorhodopsin gene, partial cds. PRGD_OTU144_50b86c281fc226d9fbee329db696d696, putative proteorhodopsin gene, partial cds. KJ929524 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 1/B subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 1 B subcluster proteorhodopsin proton pump na ; L108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; ; 67.49, -168.12) GTGCTTACTCACAGTATCCAATTAGTGTTGTTTTATTTGATTCTTAGTGCCACTACAAAAGTCTCCTCTGCTCTTTTTTGGCGTCTACTCATTGGTTCTTTAGTCATGGTGGTTGGCGAGTTCTTGGGTGCAGCTGGATATATGAGTCAGGCCTTAGGATTTATTATTGGCATTGTTGGTTGGTTATATATTTTGGGTGAGCTCTATATGGGTGAAGCCGGCAAAGCTAACGCAGCATGTGATGATCAAGCTGTGCATTTTGCGTTTAATGGGCTGCGTCTGATTGTCACTATC VLTHSIQLVLFYLILSATTKVSSALFWRLLIGSLVMVVGEFLGAAGYMSQALGFIIGIVGWLYILGELYMGEAGKANAACDDQAVHFAFNGLRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGCTTACTCACAGTATCCAATTAGTGTTGTTTTATTTGATTCTTAGTGCC---------ACT---ACAAAAGTCTCCTCT---GCTCTT------------------------------------TTTTGGCGT---CTACTCATTGGTTCTTTAGTCATGGTGGTTGGCGAGTTCTTGGGTGCA---------GCT------------------GGA------TAT---------------------------------ATG------------------------------------------------------------------AGTCAG------------------GCCTTAGGA---TTTATTATTGGCATTGTTGGTTGGTTATATATTTTGGGTGAGCTC---------------TAT------ATG---GGTGAAGCCGGCAAAGCTAACGCAGCA------TGT---GATGATCAAGCTGTG---CAT---TTT---GCG---TTT---AAT---GGGCTG---CGTCTGATTGTCACTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTHSIQLVLFYLILSA---T-TKVSS-AL------------FWR-LLIGSLVMVVGEFLGA---A------G--Y-----------M----------------------SQ------ALG-FIIGIVGWLYILGEL-----Y--M-GEAGKANAA--C-DDQAV-H-F-A-F-N-GL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamm1-IMCC2047]_KJ929499 [I-Gamm1-IMCC2047] PRGD_OTU138_4665f5c9e427e7a500a584aa0cb4a50d gb|KJ929499| PRGD_OTU138_4665f5c9e427e7a500a584aa0cb4a50d, putative proteorhodopsin gene, partial cds. PRGD_OTU138_4665f5c9e427e7a500a584aa0cb4a50d, putative proteorhodopsin gene, partial cds. KJ929499 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 1/IMCC2047-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 1 IMCC2047-like subcluster proteorhodopsin proton pump na ; L108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na GTTCTCACACATCCGATGCAAGTGGTTTTGTTTTACGTGGTTCTGACCGCGGTGACCAGTGCGTCCACGGCATTGTTCTGGCGACTGCTGATCGGTTCTCTGGTGATGGTGATCGGAGAATTCCTCGGCGCGGCTGGCTACATGAGCGTCACTTTGGGTTTCCTCATCGGGCTGGTCGGCTGGCTGTACATCCTTGGTGAGCTGTATATGGGCGAGGCAGGTCGGGTTAACGCCAAAAGCGGTAACGATGCAACGCACCTCGCTTTTAACGGGCTGCGTTTAATAGTGACTATT VLTHPMQVVLFYVVLTAVTSASTALFWRLLIGSLVMVIGEFLGAAGYMSVTLGFLIGLVGWLYILGELYMGEAGRVNAKSGNDATHLAFNGLRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTCTCACACATCCGATGCAAGTGGTTTTGTTTTACGTGGTTCTGACCGCG---------GTG---ACCAGTGCGTCCACG---GCATTG------------------------------------TTCTGGCGA---CTGCTGATCGGTTCTCTGGTGATGGTGATCGGAGAATTCCTCGGCGCG---------GCT------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AGCGTC------------------ACTTTGGGT---TTCCTCATCGGGCTGGTCGGCTGGCTGTACATCCTTGGTGAGCTG---------------TAT------ATG---GGCGAGGCAGGTCGGGTTAACGCCAAA------AGC---GGTAACGATGCAACG---CAC---CTC---GCT---TTT---AAC---GGGCTG---CGTTTAATAGTGACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTHPMQVVLFYVVLTA---V-TSAST-AL------------FWR-LLIGSLVMVIGEFLGA---A------G--Y-----------M----------------------SV------TLG-FLIGLVGWLYILGEL-----Y--M-GEAGRVNAK--S-GNDAT-H-L-A-F-N-GL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamm1-IMCC2047]_KJ929501 [I-Gamm1-IMCC2047] PRGD_OTU138_e5979f08a8c9723787efa01de7783c66 gb|KJ929501| PRGD_OTU138_e5979f08a8c9723787efa01de7783c66, putative proteorhodopsin gene, partial cds. PRGD_OTU138_e5979f08a8c9723787efa01de7783c66, putative proteorhodopsin gene, partial cds. KJ929501 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 1/IMCC2047-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 1 IMCC2047-like subcluster proteorhodopsin proton pump na ; L108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na GTGCTAACGCATCCAATGCAAATAGTGCTGTTTTACGTTGTGTTGACGGCGGTCACTAAGGTCTCTACTGCATTATTCTGGAGATTACTCATTGGCTCACTGGTTATGGTAATTGGTGAATTCCTCGGTGCGGCCGGCTACATGAGCGCTACACTAGGATTTTTAATAGGCCTTGTAGGCTGGTTATACATACTTGGCGAACTCTACATGGGAGAAGCAGGCAGGGTGAATGCTGAAAGCGGCAACGAGGCAACTCATCTCGCTTTTAACGGTTTGCGCTTAATCGTCACAATC VLTHPMQIVLFYVVLTAVTKVSTALFWRLLIGSLVMVIGEFLGAAGYMSATLGFLIGLVGWLYILGELYMGEAGRVNAESGNEATHLAFNGLRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGCTAACGCATCCAATGCAAATAGTGCTGTTTTACGTTGTGTTGACGGCG---------GTC---ACTAAGGTCTCTACT---GCATTA------------------------------------TTCTGGAGA---TTACTCATTGGCTCACTGGTTATGGTAATTGGTGAATTCCTCGGTGCG---------GCC------------------GGC------TAC---------------------------------ATG------------------------------------------------------------------AGCGCT------------------ACACTAGGA---TTTTTAATAGGCCTTGTAGGCTGGTTATACATACTTGGCGAACTC---------------TAC------ATG---GGAGAAGCAGGCAGGGTGAATGCTGAA------AGC---GGCAACGAGGCAACT---CAT---CTC---GCT---TTT---AAC---GGTTTG---CGCTTAATCGTCACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTHPMQIVLFYVVLTA---V-TKVST-AL------------FWR-LLIGSLVMVIGEFLGA---A------G--Y-----------M----------------------SA------TLG-FLIGLVGWLYILGEL-----Y--M-GEAGRVNAE--S-GNEAT-H-L-A-F-N-GL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamm1-IMCC2047]_KJ929498 [I-Gamm1-IMCC2047] PRGD_OTU138_otuREP_71d5aba55b7193d7708092613c7bf72b gb|KJ929498| PRGD_OTU138_otuREP_71d5aba55b7193d7708092613c7bf72b, putative proteorhodopsin gene, partial cds. PRGD_OTU138_otuREP_71d5aba55b7193d7708092613c7bf72b, putative proteorhodopsin gene, partial cds. KJ929498 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 1/IMCC2047-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 1 IMCC2047-like subcluster proteorhodopsin proton pump na ; L108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683) GTCATAACACATCCTATGCAGGTAGTTTTGTTTTACGTCGTGTTAACTGCAGTCACTAAGGTATCTACAGCGCTGTTCTGGAGATTGCTGATTGGTTCGTTGGTAATGGTCATCGGCGAATTTCTCGGTGCCGCCGGATATATGAGCGTCACAATAGGATTCTTAATCGGTTTAGTGGGTTGGCTATATATCCTCGGTGAGCTCTACATGGGT VITHPMQVVLFYVVLTAVTKVSTALFWRLLIGSLVMVIGEFLGAAGYMSVTIGFLIGLVGWLYILGELYMG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCATAACACATCCTATGCAGGTAGTTTTGTTTTACGTCGTGTTAACTGCA---------GTC---ACTAAGGTATCTACA---GCGCTG------------------------------------TTCTGGAGA---TTGCTGATTGGTTCGTTGGTAATGGTCATCGGCGAATTTCTCGGTGCC---------GCC------------------GGA------TAT---------------------------------ATG------------------------------------------------------------------AGCGTC------------------ACAATAGGA---TTCTTAATCGGTTTAGTGGGTTGGCTATATATCCTCGGTGAGCTC---------------TAC------ATG---GGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VITHPMQVVLFYVVLTA---V-TKVST-AL------------FWR-LLIGSLVMVIGEFLGA---A------G--Y-----------M----------------------SV------TIG-FLIGLVGWLYILGEL-----Y--M-G--------------------------------------------------------------------------------------------------------------------------------------------------------------------- [I-Gamm1-IMCC2047]_KJ929500 [I-Gamm1-IMCC2047] PRGD_OTU138_d20624472d8102b8b9cac570180762fb gb|KJ929500| PRGD_OTU138_d20624472d8102b8b9cac570180762fb, putative proteorhodopsin gene, partial cds. PRGD_OTU138_d20624472d8102b8b9cac570180762fb, putative proteorhodopsin gene, partial cds. KJ929500 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 1/IMCC2047-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 1 IMCC2047-like subcluster proteorhodopsin proton pump na ; L108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) GTCATAACACATCCTATGCAGGTAGTTTTGTTTTACGTCGTGTTAACTGCAGTCACTAAGGTATCTACAGCGCTGTTCTGGAGATTGCTGATTGGTTCGTTGGTAATGGTCATCGGCGAATTTCTCGGTGCCGCCGGATATATGAGCGTCACAATAGGATTCTTAATCGGTTTAGTGGGTTGGCTATATATCCTCGGTGAGCTCTACATGGGTGAGGCTGGGCGGTTGAATGCGGATAGTGACAACGAAGCAACGCATCTGGCTTTTAATGGTCTTCGGCTGATTGTAACCATT VITHPMQVVLFYVVLTAVTKVSTALFWRLLIGSLVMVIGEFLGAAGYMSVTIGFLIGLVGWLYILGELYMGEAGRLNADSDNEATHLAFNGLRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCATAACACATCCTATGCAGGTAGTTTTGTTTTACGTCGTGTTAACTGCA---------GTC---ACTAAGGTATCTACA---GCGCTG------------------------------------TTCTGGAGA---TTGCTGATTGGTTCGTTGGTAATGGTCATCGGCGAATTTCTCGGTGCC---------GCC------------------GGA------TAT---------------------------------ATG------------------------------------------------------------------AGCGTC------------------ACAATAGGA---TTCTTAATCGGTTTAGTGGGTTGGCTATATATCCTCGGTGAGCTC---------------TAC------ATG---GGTGAGGCTGGGCGGTTGAATGCGGAT------AGT---GACAACGAAGCAACG---CAT---CTG---GCT---TTT---AAT---GGTCTT---CGGCTGATTGTAACCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VITHPMQVVLFYVVLTA---V-TKVST-AL------------FWR-LLIGSLVMVIGEFLGA---A------G--Y-----------M----------------------SV------TIG-FLIGLVGWLYILGEL-----Y--M-GEAGRLNAD--S-DNEAT-H-L-A-F-N-GL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamm1-IMCC2047]_KJ929830 [I-Gamm1-IMCC2047] PRGD_OTU281_otuREP_b0d06d190dcef224f0e2f5e01c67b270 gb|KJ929830| PRGD_OTU281_otuREP_b0d06d190dcef224f0e2f5e01c67b270, putative proteorhodopsin gene, partial cds. PRGD_OTU281_otuREP_b0d06d190dcef224f0e2f5e01c67b270, putative proteorhodopsin gene, partial cds. KJ929830 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 1/IMCC2047-like subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 1 IMCC2047-like subcluster proteorhodopsin proton pump na ; L108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) ATACTGACTCATTCTATGCAGGTAGTTCTTTTTTATGTCATTTTGACCGCAGTAACTAAAGTCTCATCTGCACTATTCTGGAGACTTTTAATTGGAACTTTAGTAATGGTGATTGGTGAGTTTTTGGGTACTGCTGGCTATATGAGCGCAACATTAGGATTTATTATTGGAATAGTGGGTTGGCTTTATATCCTTGGTGAGTTATACATGGGGGAGGCAAGTCGCTGCAATATTGAGAGTGGCAACGAGGCTACCCATATGGCATTTAATGGATTAAGGTTAATTCTAACTATT ILTHSMQVVLFYVILTAVTKVSSALFWRLLIGTLVMVIGEFLGTAGYMSATLGFIIGIVGWLYILGELYMGEASRCNIESGNEATHMAFNGLRLILTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTGACTCATTCTATGCAGGTAGTTCTTTTTTATGTCATTTTGACCGCA---------GTA---ACTAAAGTCTCATCT---GCACTA------------------------------------TTCTGGAGA---CTTTTAATTGGAACTTTAGTAATGGTGATTGGTGAGTTTTTGGGTACT---------GCT------------------GGC------TAT---------------------------------ATG------------------------------------------------------------------AGCGCA------------------ACATTAGGA---TTTATTATTGGAATAGTGGGTTGGCTTTATATCCTTGGTGAGTTA---------------TAC------ATG---GGGGAGGCAAGTCGCTGCAATATTGAG------AGT---GGCAACGAGGCTACC---CAT---ATG---GCA---TTT---AAT---GGATTA---AGGTTAATTCTAACTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTHSMQVVLFYVILTA---V-TKVSS-AL------------FWR-LLIGTLVMVIGEFLGT---A------G--Y-----------M----------------------SA------TLG-FIIGIVGWLYILGEL-----Y--M-GEASRCNIE--S-GNEAT-H-M-A-F-N-GL-RLILTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma1-a]_KJ929315 [I-Gamma1-a] PRGD_OTU103_0d473e21cf7398f5779b068e63aa3689 gb|KJ929315| PRGD_OTU103_0d473e21cf7398f5779b068e63aa3689, putative proteorhodopsin gene, partial cds. PRGD_OTU103_0d473e21cf7398f5779b068e63aa3689, putative proteorhodopsin gene, partial cds. KJ929315 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 1/A subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 1 A subcluster proteorhodopsin proton pump na ; V108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12) TTTTTAAATTTCCCAATGCAGGTGTTAGTCTTTTATGCCATGTTAATGTCAGTTACAAAAGTTAAACAAGGAATGTTTTGGAGGCTTCTTGTAGGAACATTAGTTTTTATAATCGCAGAATTTTTAGGGGCAGCTGGATACATGAGTAAAACACTTGGCTTTATAGTAGGACTTGTTGGCTGGCTATATGTTTTAGGAGAGCTTTATGTTGGCGAAGCTGGAAGGGCTAATGCAAAATGCGGTAATGAAAATATTCAAATGGCTTTCTTTTCTAATAGGTTAATCTTAACTATA FLNFPMQVLVFYAMLMSVTKVKQGMFWRLLVGTLVFIIAEFLGAAGYMSKTLGFIVGLVGWLYVLGELYVGEAGRANAKCGNENIQMAFFSNRLILTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTAAATTTCCCAATGCAGGTGTTAGTCTTTTATGCCATGTTAATGTCA---------GTT---ACAAAAGTTAAACAA---GGAATG------------------------------------TTTTGGAGG---CTTCTTGTAGGAACATTAGTTTTTATAATCGCAGAATTTTTAGGGGCA---------GCT------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------AGTAAA------------------ACACTTGGC---TTTATAGTAGGACTTGTTGGCTGGCTATATGTTTTAGGAGAGCTT---------------TAT------GTT---GGCGAAGCTGGAAGGGCTAATGCAAAA------TGC---GGTAATGAAAATATT---CAA---ATG---GCT---TTC---TTT---TCTAAT---AGGTTAATCTTAACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FLNFPMQVLVFYAMLMS---V-TKVKQ-GM------------FWR-LLVGTLVFIIAEFLGA---A------G--Y-----------M----------------------SK------TLG-FIVGLVGWLYVLGEL-----Y--V-GEAGRANAK--C-GNENI-Q-M-A-F-F-SN-RLILTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma1-a]_KJ929314 [I-Gamma1-a] PRGD_OTU103_otuREP_27101805ebd3e22bb87cf600ba63d427 gb|KJ929314| PRGD_OTU103_otuREP_27101805ebd3e22bb87cf600ba63d427, putative proteorhodopsin gene, partial cds. PRGD_OTU103_otuREP_27101805ebd3e22bb87cf600ba63d427, putative proteorhodopsin gene, partial cds. KJ929314 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 1/A subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 1 A subcluster proteorhodopsin proton pump na ; V108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; ; 67.49, -168.12), English Channel (48.7717, -3.9683) TTTTTAAATTTCCCAATGCAGGTGTTAGTCTTTTATGCAATGTTAATGTCAGTTACAAAAGTTAAACAAGGAATGTTTTGGAGGCTTCTTGTAGGGACATTAGTTTTTATAATTGCAGAATTCTTAGGGGCAGCTGGATACATGAGCAAAACACTTGGCTTTATAGTAGGACTTGTTGGCTGGCTATATGTTTTAGGAGAGCTTTATGTTGGCGAAGCTGGAAGGGCTAATGCAAAATGCGGTAATGAAAATATTCAAATGGCTTTCTTTTCTAATAGGTTAATCTTAACTATA FLNFPMQVLVFYAMLMSVTKVKQGMFWRLLVGTLVFIIAEFLGAAGYMSKTLGFIVGLVGWLYVLGELYVGEAGRANAKCGNENIQMAFFSNRLILTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTAAATTTCCCAATGCAGGTGTTAGTCTTTTATGCAATGTTAATGTCA---------GTT---ACAAAAGTTAAACAA---GGAATG------------------------------------TTTTGGAGG---CTTCTTGTAGGGACATTAGTTTTTATAATTGCAGAATTCTTAGGGGCA---------GCT------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------AGCAAA------------------ACACTTGGC---TTTATAGTAGGACTTGTTGGCTGGCTATATGTTTTAGGAGAGCTT---------------TAT------GTT---GGCGAAGCTGGAAGGGCTAATGCAAAA------TGC---GGTAATGAAAATATT---CAA---ATG---GCT---TTC---TTT---TCTAAT---AGGTTAATCTTAACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FLNFPMQVLVFYAMLMS---V-TKVKQ-GM------------FWR-LLVGTLVFIIAEFLGA---A------G--Y-----------M----------------------SK------TLG-FIVGLVGWLYVLGEL-----Y--V-GEAGRANAK--C-GNENI-Q-M-A-F-F-SN-RLILTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma1-a]_KJ929317 [I-Gamma1-a] PRGD_OTU103_34eae2c14ffc8ce0e310f46e3a5b3c00 gb|KJ929317| PRGD_OTU103_34eae2c14ffc8ce0e310f46e3a5b3c00, putative proteorhodopsin gene, partial cds. PRGD_OTU103_34eae2c14ffc8ce0e310f46e3a5b3c00, putative proteorhodopsin gene, partial cds. KJ929317 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 1/A subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 1 A subcluster proteorhodopsin proton pump na ; V108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), Indian Ocean (-23.5956, 69.0419) TTTTTAAATTTCCCAATGCAGGTGTTAGTTTTTTATGCCATGTTAATGTCAGTTACAAAAGTTAAACAAGGAATGTTTTGGAGGCTTCTTGTAGGAACATTAGTTTTTATAATCGCAGAATTTTTAGGGGCAGCTGGATACATGAGCAAAACACTTGGCTTTATAGTAGGACTTGTTGGCTGGCTATATGTTTTAGGAGAGCTTTATGTTGGCGAAGCTGGAAGAGCTAATGCAAAATGTGGTAATGAAAATATTCAAATGGCTTTCTTTTCTAATAGGTTAATCTTAACTATA FLNFPMQVLVFYAMLMSVTKVKQGMFWRLLVGTLVFIIAEFLGAAGYMSKTLGFIVGLVGWLYVLGELYVGEAGRANAKCGNENIQMAFFSNRLILTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTAAATTTCCCAATGCAGGTGTTAGTTTTTTATGCCATGTTAATGTCA---------GTT---ACAAAAGTTAAACAA---GGAATG------------------------------------TTTTGGAGG---CTTCTTGTAGGAACATTAGTTTTTATAATCGCAGAATTTTTAGGGGCA---------GCT------------------GGA------TAC---------------------------------ATG------------------------------------------------------------------AGCAAA------------------ACACTTGGC---TTTATAGTAGGACTTGTTGGCTGGCTATATGTTTTAGGAGAGCTT---------------TAT------GTT---GGCGAAGCTGGAAGAGCTAATGCAAAA------TGT---GGTAATGAAAATATT---CAA---ATG---GCT---TTC---TTT---TCTAAT---AGGTTAATCTTAACTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FLNFPMQVLVFYAMLMS---V-TKVKQ-GM------------FWR-LLVGTLVFIIAEFLGA---A------G--Y-----------M----------------------SK------TLG-FIVGLVGWLYVLGEL-----Y--V-GEAGRANAK--C-GNENI-Q-M-A-F-F-SN-RLILTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma1-a]_KJ929316 [I-Gamma1-a] PRGD_OTU103_326320d794683b8e3396c57101e3b28c gb|KJ929316| PRGD_OTU103_326320d794683b8e3396c57101e3b28c, putative proteorhodopsin gene, partial cds. PRGD_OTU103_326320d794683b8e3396c57101e3b28c, putative proteorhodopsin gene, partial cds. KJ929316 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 1/A subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 1 A subcluster proteorhodopsin proton pump na ; V108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Indian Ocean (-33.28, 45.35) TTTTTAAATTTTCCTATGCAAGTATTAGTTTTTTACGCGATGTTAATGTCAGTCACTAAAGTAAAACAAGGAATGTTTTGGAGACTTTTAGTCGGTACACTTGTCTTTGTTATAGCTGAATTTTTAGGGGCCGCAGGATATATGAGCAAAACACTTGGTTTTATCGTAGGTCTTGTAGGATGGTTATATGTTCTTGGTGAGCTTTATGTAGGAGAAGCAGGAAGAGCGAATGCAAAATGTGGTAACGAAAATATTCAAATGGCTTTCTTTTCAAACAGATTAATTCTAACAATA FLNFPMQVLVFYAMLMSVTKVKQGMFWRLLVGTLVFVIAEFLGAAGYMSKTLGFIVGLVGWLYVLGELYVGEAGRANAKCGNENIQMAFFSNRLILTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTAAATTTTCCTATGCAAGTATTAGTTTTTTACGCGATGTTAATGTCA---------GTC---ACTAAAGTAAAACAA---GGAATG------------------------------------TTTTGGAGA---CTTTTAGTCGGTACACTTGTCTTTGTTATAGCTGAATTTTTAGGGGCC---------GCA------------------GGA------TAT---------------------------------ATG------------------------------------------------------------------AGCAAA------------------ACACTTGGT---TTTATCGTAGGTCTTGTAGGATGGTTATATGTTCTTGGTGAGCTT---------------TAT------GTA---GGAGAAGCAGGAAGAGCGAATGCAAAA------TGT---GGTAACGAAAATATT---CAA---ATG---GCT---TTC---TTT---TCAAAC---AGATTAATTCTAACAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FLNFPMQVLVFYAMLMS---V-TKVKQ-GM------------FWR-LLVGTLVFVIAEFLGA---A------G--Y-----------M----------------------SK------TLG-FIVGLVGWLYVLGEL-----Y--V-GEAGRANAK--C-GNENI-Q-M-A-F-F-SN-RLILTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma1-a]_KJ929318 [I-Gamma1-a] PRGD_OTU103_a69b99a0b7c48c9b717f2ddfc766decb gb|KJ929318| PRGD_OTU103_a69b99a0b7c48c9b717f2ddfc766decb, putative proteorhodopsin gene, partial cds. PRGD_OTU103_a69b99a0b7c48c9b717f2ddfc766decb, putative proteorhodopsin gene, partial cds. KJ929318 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 1/A subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 1 A subcluster proteorhodopsin proton pump na ; I108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTTTTAAACTTTCCTATGCAGGTGCTTATTTTTTATGCAATGCTGATGTCAGTTGTAAAAGTAAAACAGGGGATGTTTTGGAGATTATTAGTCGGAACTCTAGTTTTTATTGTTGCTGAATTTCTTGGAGCCGCTGGTTACATGAGTAAGACTCTAGGCTTTATCGTTGGTTTAGTAGGTTGGTTATATGTTTTGGGTGAGCTTTATGTCGGTGAGGCCGGTAGAGCAAATGCTAAATGCGGAAATGAAAACATTCAAATGGCATTTTTTTCAAATAGATTAATTTTAACAATC FLNFPMQVLIFYAMLMSVVKVKQGMFWRLLVGTLVFIVAEFLGAAGYMSKTLGFIVGLVGWLYVLGELYVGEAGRANAKCGNENIQMAFFSNRLILTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTAAACTTTCCTATGCAGGTGCTTATTTTTTATGCAATGCTGATGTCA---------GTT---GTAAAAGTAAAACAG---GGGATG------------------------------------TTTTGGAGA---TTATTAGTCGGAACTCTAGTTTTTATTGTTGCTGAATTTCTTGGAGCC---------GCT------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AGTAAG------------------ACTCTAGGC---TTTATCGTTGGTTTAGTAGGTTGGTTATATGTTTTGGGTGAGCTT---------------TAT------GTC---GGTGAGGCCGGTAGAGCAAATGCTAAA------TGC---GGAAATGAAAACATT---CAA---ATG---GCA---TTT---TTT---TCAAAT---AGATTAATTTTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FLNFPMQVLIFYAMLMS---V-VKVKQ-GM------------FWR-LLVGTLVFIVAEFLGA---A------G--Y-----------M----------------------SK------TLG-FIVGLVGWLYVLGEL-----Y--V-GEAGRANAK--C-GNENI-Q-M-A-F-F-SN-RLILTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma1-a]_KJ929319 [I-Gamma1-a] PRGD_OTU103_f8e3298f6ff18045a4be87dbddd6f400 gb|KJ929319| PRGD_OTU103_f8e3298f6ff18045a4be87dbddd6f400, putative proteorhodopsin gene, partial cds. PRGD_OTU103_f8e3298f6ff18045a4be87dbddd6f400, putative proteorhodopsin gene, partial cds. KJ929319 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 1/A subcluster]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 1 A subcluster proteorhodopsin proton pump na ; I108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) TTTTTAAACTTTCCTATGCAGGTGCTTATTTTTTATGCAATGCTGATGTCAGTTGTAAAAGTAAAACAGGGAATGTTTTGGAGATTATTAGTCGGAACTCTAGTTTTTATTGTGGCTGAATTTCTTGGAGCCGCTGGTTACATGAGTAAGACTCTAGGCTTTATCGTTGGTTTAGTGGGTTGGTTATATGTTTTGGGTGAGCTTTATGTCGGTGAGGCCGGTAGAGCAAATGCTAAATGCGGAAATGAAAACATTCAAATGGCATTTTTTTCAAATAGATTAATTTTAACAATC FLNFPMQVLIFYAMLMSVVKVKQGMFWRLLVGTLVFIVAEFLGAAGYMSKTLGFIVGLVGWLYVLGELYVGEAGRANAKCGNENIQMAFFSNRLILTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTAAACTTTCCTATGCAGGTGCTTATTTTTTATGCAATGCTGATGTCA---------GTT---GTAAAAGTAAAACAG---GGAATG------------------------------------TTTTGGAGA---TTATTAGTCGGAACTCTAGTTTTTATTGTGGCTGAATTTCTTGGAGCC---------GCT------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AGTAAG------------------ACTCTAGGC---TTTATCGTTGGTTTAGTGGGTTGGTTATATGTTTTGGGTGAGCTT---------------TAT------GTC---GGTGAGGCCGGTAGAGCAAATGCTAAA------TGC---GGAAATGAAAACATT---CAA---ATG---GCA---TTT---TTT---TCAAAT---AGATTAATTTTAACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FLNFPMQVLIFYAMLMS---V-VKVKQ-GM------------FWR-LLVGTLVFIVAEFLGA---A------G--Y-----------M----------------------SK------TLG-FIVGLVGWLYVLGEL-----Y--V-GEAGRANAK--C-GNENI-Q-M-A-F-F-SN-RLILTI-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma1]_KJ929764 [I-Gamma1] PRGD_OTU234_otuREP_12978fcac95a0b670191653b9ef30240 gb|KJ929764| PRGD_OTU234_otuREP_12978fcac95a0b670191653b9ef30240, putative proteorhodopsin gene, partial cds. PRGD_OTU234_otuREP_12978fcac95a0b670191653b9ef30240, putative proteorhodopsin gene, partial cds. KJ929764 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 1]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 1 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAATAACCGTTCCACTGCTAATGATTGAGTTTTATTTAATACTTAGAGCAGTTGCTGAAGTATCTGTAGGCATTTTTTGGCGATTACTAGTAGGAACTGTAATTATGCTGGTTTTTGGCTATCTTGGAGAAGCGGGAACTATAAACACGACTCTAGGATTTGTTATTGGTATGTTAGGATGGGCATATATTCTTTATGAAGTATTTTTTGGAGAAGCTTCAAAAGTTAATGCAGCTACTGCTAACGCCTCATGTCAACAAGCTTACAAGGCAATGCAGTGGATAGTTTTAGTA LITVPLLMIEFYLILRAVAEVSVGIFWRLLVGTVIMLVFGYLGEAGTINTTLGFVIGMLGWAYILYEVFFGEASKVNAATANASCQQAYKAMQWIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACCGTTCCACTGCTAATGATTGAGTTTTATTTAATACTTAGAGCA---------GTT---GCTGAAGTATCTGTA---GGCATT------------------------------------TTTTGGCGA---TTACTAGTAGGAACTGTAATTATGCTGGTTTTTGGCTATCTTGGAGAA---------GCG------------------GGA------ACT---------------------------------ATA------------------------------------------------------------------AACACG------------------ACTCTAGGA---TTTGTTATTGGTATGTTAGGATGGGCATATATTCTTTATGAAGTA---------------TTT------TTT---GGAGAAGCTTCAAAAGTTAATGCAGCT------ACT---GCTAACGCCTCATGT---CAA---CAA---GCT---TAC---AAG---GCAATG---CAGTGGATAGTTTTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---V-AEVSV-GI------------FWR-LLVGTVIMLVFGYLGE---A------G--T-----------I----------------------NT------TLG-FVIGMLGWAYILYEV-----F--F-GEASKVNAA--T-ANASC-Q-Q-A-Y-K-AM-QWIVLV-------------------------------------------------------------------------------------------------------------------------------- [I-Gamma1]_KJ929765 [I-Gamma1] PRGD_OTU234_ed0a78c25f99a2ffec77a6ded3e5e684 gb|KJ929765| PRGD_OTU234_ed0a78c25f99a2ffec77a6ded3e5e684, putative proteorhodopsin gene, partial cds. PRGD_OTU234_ed0a78c25f99a2ffec77a6ded3e5e684, putative proteorhodopsin gene, partial cds. KJ929765 [[proteorhodopsin super-cluster I/Gammaproteobacterial-like cluster 1]] proteorhodopsin super-cluster I Gammaproteobacterial-like cluster 1 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAATAACCGTTCCACTGCTAATGATTGAGTTTTACTTAATACTTAGAGCAGTAGCAGAAGTATCTGTAGGCATTTTTTGGCGATTACTCGTAGGTACTGTAATTATGCTGGTTTTTGGCTATCTTGGAGAAGCGGGAACTATAAATACAACTCTGGGATTTGTTATTGGTATGTTAGGTTGGGCATATATTCTTTACGAAGTATTTTTCGGAGAAGCTTCAAAAGTTAATGCATCAACAGCTAATGCTTCATGCCAACAAGCTTATAAGGCAATGCAATGGATAGTATTAGTA LITVPLLMIEFYLILRAVAEVSVGIFWRLLVGTVIMLVFGYLGEAGTINTTLGFVIGMLGWAYILYEVFFGEASKVNASTANASCQQAYKAMQWIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAACCGTTCCACTGCTAATGATTGAGTTTTACTTAATACTTAGAGCA---------GTA---GCAGAAGTATCTGTA---GGCATT------------------------------------TTTTGGCGA---TTACTCGTAGGTACTGTAATTATGCTGGTTTTTGGCTATCTTGGAGAA---------GCG------------------GGA------ACT---------------------------------ATA------------------------------------------------------------------AATACA------------------ACTCTGGGA---TTTGTTATTGGTATGTTAGGTTGGGCATATATTCTTTACGAAGTA---------------TTT------TTC---GGAGAAGCTTCAAAAGTTAATGCATCA------ACA---GCTAATGCTTCATGC---CAA---CAA---GCT---TAT---AAG---GCAATG---CAATGGATAGTATTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILRA---V-AEVSV-GI------------FWR-LLVGTVIMLVFGYLGE---A------G--T-----------I----------------------NT------TLG-FVIGMLGWAYILYEV-----F--F-GEASKVNAS--T-ANASC-Q-Q-A-Y-K-AM-QWIVLV-------------------------------------------------------------------------------------------------------------------------------- [I-env4]_KJ930011 [I-env4] PRGD_OTU384_otuREP_0e2648ab447a9fe41e8fdc9c4ce29153 gb|KJ930011| PRGD_OTU384_otuREP_0e2648ab447a9fe41e8fdc9c4ce29153, putative proteorhodopsin gene, partial cds. PRGD_OTU384_otuREP_0e2648ab447a9fe41e8fdc9c4ce29153, putative proteorhodopsin gene, partial cds. KJ930011 [[proteorhodopsin super-cluster I/env cluster 4]] proteorhodopsin super-cluster I env cluster 4 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTTATAACTGTCCCTTTGCAAATAGTTGAATTTTATTTAATCCTTGCGGCAATAACAATTGTGCCAGTGGCTCTATTCTGGAGGCTCCTAATCTATTCATTAGTGATGTTAGTTTTTGGGTATCTCGGTGAAGCTGGCTTTATGAATGTAACACTCGGTTTTGTTATAGGTATGGCCGGTTGGTTGCTCATCCTGTATGAAATTTTTGCAGGTGAAGCAAGTAAGATTAATGCAGATTCTGCAAATGCCTCTTGTCAAAAAGCCTTTAATGCTTTGAGATTGATAGTAACGATA LITVPLQIVEFYLILAAITIVPVALFWRLLIYSLVMLVFGYLGEAGFMNVTLGFVIGMAGWLLILYEIFAGEASKINADSANASCQKAFNALRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATAACTGTCCCTTTGCAAATAGTTGAATTTTATTTAATCCTTGCGGCA---------ATA---ACAATTGTGCCAGTG---GCTCTA------------------------------------TTCTGGAGG---CTCCTAATCTATTCATTAGTGATGTTAGTTTTTGGGTATCTCGGTGAA---------GCT------------------GGC------TTT---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTCGGT---TTTGTTATAGGTATGGCCGGTTGGTTGCTCATCCTGTATGAAATT---------------TTT------GCA---GGTGAAGCAAGTAAGATTAATGCAGAT------TCT---GCAAATGCCTCTTGT---CAA---AAA---GCC---TTT---AAT---GCTTTG---AGATTGATAGTAACGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---I-TIVPV-AL------------FWR-LLIYSLVMLVFGYLGE---A------G--F-----------M----------------------NV------TLG-FVIGMAGWLLILYEI-----F--A-GEASKINAD--S-ANASC-Q-K-A-F-N-AL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-env4]_KJ930013 [I-env4] PRGD_OTU384_a3e6535fce29a4d661a3a0567aeb25c6 gb|KJ930013| PRGD_OTU384_a3e6535fce29a4d661a3a0567aeb25c6, putative proteorhodopsin gene, partial cds. PRGD_OTU384_a3e6535fce29a4d661a3a0567aeb25c6, putative proteorhodopsin gene, partial cds. KJ930013 [[proteorhodopsin super-cluster I/env cluster 4]] proteorhodopsin super-cluster I env cluster 4 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) CTTATAACTGTCCCTTTACAAATAGTTGAATTTTATTTAATACTTGCGGCAATAACAATTGTCCCAGTGGCTCTATTCTGGAGGCTCCTAATCTACTCATTAGTGATGTTAGTTTTTGGGTATCTCGGAGAAGCTGGCTTTATGAATGTAACACTCGGATTTGTTATAGGTATGGCCGGTTGGTTGCTCATCCTGTATGAAATATTTGCAGGTGAAGCAAGTAAGATTAATGCAGATTCTGCAAATGCCTCTTGTCAAAAAGCCTTTAATGCTTTGAGATTGATTGTAACGATA LITVPLQIVEFYLILAAITIVPVALFWRLLIYSLVMLVFGYLGEAGFMNVTLGFVIGMAGWLLILYEIFAGEASKINADSANASCQKAFNALRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATAACTGTCCCTTTACAAATAGTTGAATTTTATTTAATACTTGCGGCA---------ATA---ACAATTGTCCCAGTG---GCTCTA------------------------------------TTCTGGAGG---CTCCTAATCTACTCATTAGTGATGTTAGTTTTTGGGTATCTCGGAGAA---------GCT------------------GGC------TTT---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTCGGA---TTTGTTATAGGTATGGCCGGTTGGTTGCTCATCCTGTATGAAATA---------------TTT------GCA---GGTGAAGCAAGTAAGATTAATGCAGAT------TCT---GCAAATGCCTCTTGT---CAA---AAA---GCC---TTT---AAT---GCTTTG---AGATTGATTGTAACGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---I-TIVPV-AL------------FWR-LLIYSLVMLVFGYLGE---A------G--F-----------M----------------------NV------TLG-FVIGMAGWLLILYEI-----F--A-GEASKINAD--S-ANASC-Q-K-A-F-N-AL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-env4]_KJ930014 [I-env4] PRGD_OTU384_a495ec868c74e0ec0fc6fc368bb3f9b7 gb|KJ930014| PRGD_OTU384_a495ec868c74e0ec0fc6fc368bb3f9b7, putative proteorhodopsin gene, partial cds. PRGD_OTU384_a495ec868c74e0ec0fc6fc368bb3f9b7, putative proteorhodopsin gene, partial cds. KJ930014 [[proteorhodopsin super-cluster I/env cluster 4]] proteorhodopsin super-cluster I env cluster 4 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTATAACTGTCCCTTTGCAAATAGTTGAGTTTTATCTAATCCTTGCAGCAATAACGATTGTCCCAGCGGCTCTATTTTGGAGGCTCCTAATCTATTCATTAGTAATGTTAGTTTTTGGATATCTCGGAGAAGCTGGTTTTATGAATGTAACACTCGGATTTGTTATAGGTATGGCCGGTTGGTTGCTCATCCTGTATGAAATATTTGCTGGTGAAGCAAGTAAGATTAATGCAGATTCTGCAAATGCCTCTTGTCAGAAAGCCTTTAATGCTTTGAGATTGATAGTAACGATA LITVPLQIVEFYLILAAITIVPAALFWRLLIYSLVMLVFGYLGEAGFMNVTLGFVIGMAGWLLILYEIFAGEASKINADSANASCQKAFNALRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATAACTGTCCCTTTGCAAATAGTTGAGTTTTATCTAATCCTTGCAGCA---------ATA---ACGATTGTCCCAGCG---GCTCTA------------------------------------TTTTGGAGG---CTCCTAATCTATTCATTAGTAATGTTAGTTTTTGGATATCTCGGAGAA---------GCT------------------GGT------TTT---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTCGGA---TTTGTTATAGGTATGGCCGGTTGGTTGCTCATCCTGTATGAAATA---------------TTT------GCT---GGTGAAGCAAGTAAGATTAATGCAGAT------TCT---GCAAATGCCTCTTGT---CAG---AAA---GCC---TTT---AAT---GCTTTG---AGATTGATAGTAACGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---I-TIVPA-AL------------FWR-LLIYSLVMLVFGYLGE---A------G--F-----------M----------------------NV------TLG-FVIGMAGWLLILYEI-----F--A-GEASKINAD--S-ANASC-Q-K-A-F-N-AL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-env4]_KJ930015 [I-env4] PRGD_OTU384_bf672cab12b1aa1a4c0db8f95393bc3d gb|KJ930015| PRGD_OTU384_bf672cab12b1aa1a4c0db8f95393bc3d, putative proteorhodopsin gene, partial cds. PRGD_OTU384_bf672cab12b1aa1a4c0db8f95393bc3d, putative proteorhodopsin gene, partial cds. KJ930015 [[proteorhodopsin super-cluster I/env cluster 4]] proteorhodopsin super-cluster I env cluster 4 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTTATAACTGTCCCTTTGCAAATAGTTGAATTTTATCTAATCCTTGCGGCAATAACGATTGTCCCAGCGGCTCTATTCTGGAGGCTCCTAATATATTCACTAGTAATGTTAGTTTTTGGATATCTCGGAGAAGCTGGCTTCATGAATGTAACACTCGGGTTTGTAATAGGTATGGCCGGTTGGTTACTCATCCTGTATGAAATATTTGCAGGTGAAGCAAGTAAGATTAATGCAGATTCTGCAAATGCCTCATGTCAAAAAGCCTTTAATGCTTTGAGACTGATAGTAACGATA LITVPLQIVEFYLILAAITIVPAALFWRLLIYSLVMLVFGYLGEAGFMNVTLGFVIGMAGWLLILYEIFAGEASKINADSANASCQKAFNALRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATAACTGTCCCTTTGCAAATAGTTGAATTTTATCTAATCCTTGCGGCA---------ATA---ACGATTGTCCCAGCG---GCTCTA------------------------------------TTCTGGAGG---CTCCTAATATATTCACTAGTAATGTTAGTTTTTGGATATCTCGGAGAA---------GCT------------------GGC------TTC---------------------------------ATG------------------------------------------------------------------AATGTA------------------ACACTCGGG---TTTGTAATAGGTATGGCCGGTTGGTTACTCATCCTGTATGAAATA---------------TTT------GCA---GGTGAAGCAAGTAAGATTAATGCAGAT------TCT---GCAAATGCCTCATGT---CAA---AAA---GCC---TTT---AAT---GCTTTG---AGACTGATAGTAACGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---I-TIVPA-AL------------FWR-LLIYSLVMLVFGYLGE---A------G--F-----------M----------------------NV------TLG-FVIGMAGWLLILYEI-----F--A-GEASKINAD--S-ANASC-Q-K-A-F-N-AL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [I-env4]_KJ930012 [I-env4] PRGD_OTU384_131675d70f197a7693edbb07a4d1bac8 gb|KJ930012| PRGD_OTU384_131675d70f197a7693edbb07a4d1bac8, putative proteorhodopsin gene, partial cds. PRGD_OTU384_131675d70f197a7693edbb07a4d1bac8, putative proteorhodopsin gene, partial cds. KJ930012 [[proteorhodopsin super-cluster I/env cluster 4]] proteorhodopsin super-cluster I env cluster 4 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (72.0542, -130.8781), Indian Ocean (-14.48, 113.45) CTTATAACTGTCCCTTTGCAAATAGTTGAATTTTATTTAATCCTTGCGGCAATAACGATTGTCCCTGTGGCTCTATTCTGGAGACTCCTAATCTATTCATTAGTAATGTTAGTTTTTGGGTATCTCGGAGAAGCTGGCTTTATGAATGTGACACTCGGGTTTGTTATAGGTATGGCTGGTTGGTTGCTCATCCTGTATGAAATATTTGCAGGAGAAGCAAGCAAGATTAATGCAGATTCTGCAAATGCATCTTGTCAAAAGGCCTTTAATGCTTTGAGATTGATAGTAACGATA LITVPLQIVEFYLILAAITIVPVALFWRLLIYSLVMLVFGYLGEAGFMNVTLGFVIGMAGWLLILYEIFAGEASKINADSANASCQKAFNALRLIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATAACTGTCCCTTTGCAAATAGTTGAATTTTATTTAATCCTTGCGGCA---------ATA---ACGATTGTCCCTGTG---GCTCTA------------------------------------TTCTGGAGA---CTCCTAATCTATTCATTAGTAATGTTAGTTTTTGGGTATCTCGGAGAA---------GCT------------------GGC------TTT---------------------------------ATG------------------------------------------------------------------AATGTG------------------ACACTCGGG---TTTGTTATAGGTATGGCTGGTTGGTTGCTCATCCTGTATGAAATA---------------TTT------GCA---GGAGAAGCAAGCAAGATTAATGCAGAT------TCT---GCAAATGCATCTTGT---CAA---AAG---GCC---TTT---AAT---GCTTTG---AGATTGATAGTAACGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQIVEFYLILAA---I-TIVPV-AL------------FWR-LLIYSLVMLVFGYLGE---A------G--F-----------M----------------------NV------TLG-FVIGMAGWLLILYEI-----F--A-GEASKINAD--S-ANASC-Q-K-A-F-N-AL-RLIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ929974 [unk-env3-b] PRGD_OTU383_3bb2aae2beb03824a52b97abd21b44e5 gb|KJ929974| PRGD_OTU383_3bb2aae2beb03824a52b97abd21b44e5, putative proteorhodopsin gene, partial cds. PRGD_OTU383_3bb2aae2beb03824a52b97abd21b44e5, putative proteorhodopsin gene, partial cds. KJ929974 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTCATTACAGTGCCATTATTAATGATTGAATTCTTTATTATCCTCAAGGCTGTAGGTGCCGCAGTTTCCTCAAGTTCATTCTGGAGACTACTCATAGGTACCCTAGTCATGCTCATTGGTGGTTACCTCGGCGAAGCAGGCGTTATGTCAGCAAGCCTAGGATTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCTAGTAAAGCCGCAGAAGCTAATGCAGGTGTGAAAGCAGCTTTCAATGCGCTGAGACTTATCGTGCTCGTT LITVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKAAFNALRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATTACAGTGCCATTATTAATGATTGAATTCTTTATTATCCTCAAGGCT---------GTAGGTGCCGCAGTTTCCTCA---AGTTCA------------------------------------TTCTGGAGA---CTACTCATAGGTACCCTAGTCATGCTCATTGGTGGTTACCTCGGCGAA---------GCA------------------GGC------GTT---------------------------------ATG------------------------------------------------------------------TCAGCA------------------AGCCTAGGA---TTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCTAGTAAAGCCGCA------------GAA---GCTAATGCAGGTGTG---AAA---GCA---GCT---TTC---AAT---GCGCTG---AGACTTATCGTGCTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-A-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ930010 [unk-env3-b] PRGD_OTU383_fa1ba38040036291dbf844022758cbe1 gb|KJ930010| PRGD_OTU383_fa1ba38040036291dbf844022758cbe1, putative proteorhodopsin gene, partial cds. PRGD_OTU383_fa1ba38040036291dbf844022758cbe1, putative proteorhodopsin gene, partial cds. KJ930010 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) CTCATTACAGTGCCATTATTAATGATTGAATTCTTTATTATCCTCAAGGCTGTAGGTGCTGCAGTTTCCTCAAGTTCATTCTGGAGACTACTCATAGGTACCCTAGTCATGCTCATAGGTGGCTACCTTGGCGAAGCAGGCGTTATGTCAGCAAGCCTAGGATTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCTAGTAAAGCCGCAGAAGCTAATGCTGGTGTGAAAGCAGCTTTCAATGCGCTGAGACTAATCGTGCTCGTT LITVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKAAFNALRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATTACAGTGCCATTATTAATGATTGAATTCTTTATTATCCTCAAGGCT---------GTAGGTGCTGCAGTTTCCTCA---AGTTCA------------------------------------TTCTGGAGA---CTACTCATAGGTACCCTAGTCATGCTCATAGGTGGCTACCTTGGCGAA---------GCA------------------GGC------GTT---------------------------------ATG------------------------------------------------------------------TCAGCA------------------AGCCTAGGA---TTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCTAGTAAAGCCGCA------------GAA---GCTAATGCTGGTGTG---AAA---GCA---GCT---TTC---AAT---GCGCTG---AGACTAATCGTGCTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-A-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ930003 [unk-env3-b] PRGD_OTU383_e5c185c1b1375909630ffc0a1314f3a4 gb|KJ930003| PRGD_OTU383_e5c185c1b1375909630ffc0a1314f3a4, putative proteorhodopsin gene, partial cds. PRGD_OTU383_e5c185c1b1375909630ffc0a1314f3a4, putative proteorhodopsin gene, partial cds. KJ930003 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) CTCATTACAGTGCCATTATTAATGATTGAATTCTTTATTATCCTTAAGGCTGTAGGTGCTGCAGTTTCCTCAAGTTCATTCTGGAGACTACTCATAGGTACCCTAGTCATGCTCATTGGTGGTTACCTTGGCGAAGCAGGCGTTATGTCAGCAAGCCTAGGATTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCTAGTAAAGCCGCAGAAGCTAATGCTGGTGTCAAAGCAGCTTTCAATGCACTGAGACTAATCGTGCTCGTT LITVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKAAFNALRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATTACAGTGCCATTATTAATGATTGAATTCTTTATTATCCTTAAGGCT---------GTAGGTGCTGCAGTTTCCTCA---AGTTCA------------------------------------TTCTGGAGA---CTACTCATAGGTACCCTAGTCATGCTCATTGGTGGTTACCTTGGCGAA---------GCA------------------GGC------GTT---------------------------------ATG------------------------------------------------------------------TCAGCA------------------AGCCTAGGA---TTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCTAGTAAAGCCGCA------------GAA---GCTAATGCTGGTGTC---AAA---GCA---GCT---TTC---AAT---GCACTG---AGACTAATCGTGCTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-A-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ929988 [unk-env3-b] PRGD_OTU383_96f9288c9655d752c2d405e8b2fe8ad7 gb|KJ929988| PRGD_OTU383_96f9288c9655d752c2d405e8b2fe8ad7, putative proteorhodopsin gene, partial cds. PRGD_OTU383_96f9288c9655d752c2d405e8b2fe8ad7, putative proteorhodopsin gene, partial cds. KJ929988 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) CTCATTACAGTGCCATTATTAATGATTGAATTCTTTATTATTCTCAAGGCTGTAGGTGCTGCAGTTTCCTCAAGTTCATTCTGGAGACTTCTCATAGGTACCCTAGTCATGCTCATTGGTGGTTACCTTGGCGAAGCAGGCGTTATGTCAGCAAGCCTAGGATTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCTAGTAAAGCCGCAGAAGCTAATGCTGGTGTGAAATCAGCTTTCAATGCGCTGAGACTAATCGTGCTCGTT LITVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKSAFNALRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATTACAGTGCCATTATTAATGATTGAATTCTTTATTATTCTCAAGGCT---------GTAGGTGCTGCAGTTTCCTCA---AGTTCA------------------------------------TTCTGGAGA---CTTCTCATAGGTACCCTAGTCATGCTCATTGGTGGTTACCTTGGCGAA---------GCA------------------GGC------GTT---------------------------------ATG------------------------------------------------------------------TCAGCA------------------AGCCTAGGA---TTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCTAGTAAAGCCGCA------------GAA---GCTAATGCTGGTGTG---AAA---TCA---GCT---TTC---AAT---GCGCTG---AGACTAATCGTGCTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-S-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ930007 [unk-env3-b] PRGD_OTU383_f0fe1f432b48cca87d24c33a633d06f1 gb|KJ930007| PRGD_OTU383_f0fe1f432b48cca87d24c33a633d06f1, putative proteorhodopsin gene, partial cds. PRGD_OTU383_f0fe1f432b48cca87d24c33a633d06f1, putative proteorhodopsin gene, partial cds. KJ930007 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) CTCATTACAGTGCCATTATTAATGATTGAATTCTTTATTATCCTCAAGGCTGTAGGTGCTGCAGTTTCCTCAAGTTCATTCTGGAGACTACTCATAGGTACCCTAGTCATGCTCATTGGTGGTTACCTTGGCGAAGCAGGCGTTATGTCAGCAAGCCTAGGATTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCTAGTAAAGCCGCAGAAGCTAATGCTGGTGTGAAAGCAGCTTTCAATGCGCTGAGACTAATCGTGCTCGTT LITVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKAAFNALRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATTACAGTGCCATTATTAATGATTGAATTCTTTATTATCCTCAAGGCT---------GTAGGTGCTGCAGTTTCCTCA---AGTTCA------------------------------------TTCTGGAGA---CTACTCATAGGTACCCTAGTCATGCTCATTGGTGGTTACCTTGGCGAA---------GCA------------------GGC------GTT---------------------------------ATG------------------------------------------------------------------TCAGCA------------------AGCCTAGGA---TTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCTAGTAAAGCCGCA------------GAA---GCTAATGCTGGTGTG---AAA---GCA---GCT---TTC---AAT---GCGCTG---AGACTAATCGTGCTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-A-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ929992 [unk-env3-b] PRGD_OTU383_b00232be956dccf74892ccfaa31be743 gb|KJ929992| PRGD_OTU383_b00232be956dccf74892ccfaa31be743, putative proteorhodopsin gene, partial cds. PRGD_OTU383_b00232be956dccf74892ccfaa31be743, putative proteorhodopsin gene, partial cds. KJ929992 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) CTAATTACAGTGCCATTATTAATGATTGAATTCTTTATTATCCTCAAGGCTGTAGGTGCTGCAGTTTCCTCAAGTTCATTCTGGAGACTACTCATAGGTACCCTAGTCATGCTCATTGGTGGTTACCTTGGCGAAGCAGGCGTTATGTCAGCAAGCCTAGGATTCATTATTGGTATGGTTGGTTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCTAGTAAAGCCGCAGAAGCTAATGCTGGTGTGAAAGCAGCTTTTAATGCGCTGAGACTAATCGTGCTCGTT LITVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMVGWAVIIWEIFGGEASKAAEANAGVKAAFNALRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTGCCATTATTAATGATTGAATTCTTTATTATCCTCAAGGCT---------GTAGGTGCTGCAGTTTCCTCA---AGTTCA------------------------------------TTCTGGAGA---CTACTCATAGGTACCCTAGTCATGCTCATTGGTGGTTACCTTGGCGAA---------GCA------------------GGC------GTT---------------------------------ATG------------------------------------------------------------------TCAGCA------------------AGCCTAGGA---TTCATTATTGGTATGGTTGGTTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCTAGTAAAGCCGCA------------GAA---GCTAATGCTGGTGTG---AAA---GCA---GCT---TTT---AAT---GCGCTG---AGACTAATCGTGCTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMVGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-A-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ929977 [unk-env3-b] PRGD_OTU383_502f9ed5583b1e495ebf91f6af431c26 gb|KJ929977| PRGD_OTU383_502f9ed5583b1e495ebf91f6af431c26, putative proteorhodopsin gene, partial cds. PRGD_OTU383_502f9ed5583b1e495ebf91f6af431c26, putative proteorhodopsin gene, partial cds. KJ929977 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419) CTAATTACAGTGCCATTATTAATGATTGAATTCTTTATTATCCTCAAGGCTGTAGGCGCTGCAGTTTCCTCAAGTTCATTCTGGAGACTACTCATAGGTACCTTAGTCATGCTCATTGGTGGTTACCTCGGTGAAGCAGGCGTTATGTCAGCAAGCCTAGGATTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCCAGTAAAGCCGCAGAAGCTAATGCTGGTGTGAAAGCAGCTTTCAATGCACTAAGACTGATCGTCCTCGTT LITVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKAAFNALRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTGCCATTATTAATGATTGAATTCTTTATTATCCTCAAGGCT---------GTAGGCGCTGCAGTTTCCTCA---AGTTCA------------------------------------TTCTGGAGA---CTACTCATAGGTACCTTAGTCATGCTCATTGGTGGTTACCTCGGTGAA---------GCA------------------GGC------GTT---------------------------------ATG------------------------------------------------------------------TCAGCA------------------AGCCTAGGA---TTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCCAGTAAAGCCGCA------------GAA---GCTAATGCTGGTGTG---AAA---GCA---GCT---TTC---AAT---GCACTA---AGACTGATCGTCCTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-A-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ929995 [unk-env3-b] PRGD_OTU383_cb746e874f2757a17c572077c1167711 gb|KJ929995| PRGD_OTU383_cb746e874f2757a17c572077c1167711, putative proteorhodopsin gene, partial cds. PRGD_OTU383_cb746e874f2757a17c572077c1167711, putative proteorhodopsin gene, partial cds. KJ929995 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683) CTAATTACAGTGCCTCTATTAATGATTGAATTCTTTATTATCCTCAAGGCTGTAGGTGCTGCAGTTTCCTCAAGTTCATTCTGGAGACTACTCATAGGTACCTTAGTCATGCTCATTGGTGGTTACCTCGGTGAAGCAGGCGTCATGTCAGCGAGCCTAGGATTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCTAGTAAAGCCGCAGAAGCTAATGCTGGTGTGAAAGCAGCTTTCAATGCGCTGAGACTAATCGTGCTCGTT LITVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKAAFNALRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTGCCTCTATTAATGATTGAATTCTTTATTATCCTCAAGGCT---------GTAGGTGCTGCAGTTTCCTCA---AGTTCA------------------------------------TTCTGGAGA---CTACTCATAGGTACCTTAGTCATGCTCATTGGTGGTTACCTCGGTGAA---------GCA------------------GGC------GTC---------------------------------ATG------------------------------------------------------------------TCAGCG------------------AGCCTAGGA---TTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCTAGTAAAGCCGCA------------GAA---GCTAATGCTGGTGTG---AAA---GCA---GCT---TTC---AAT---GCGCTG---AGACTAATCGTGCTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-A-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ929970 [unk-env3-b] PRGD_OTU383_0f309d020f44f8e7d5bec48f548e76a1 gb|KJ929970| PRGD_OTU383_0f309d020f44f8e7d5bec48f548e76a1, putative proteorhodopsin gene, partial cds. PRGD_OTU383_0f309d020f44f8e7d5bec48f548e76a1, putative proteorhodopsin gene, partial cds. KJ929970 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -33.28, 45.35) CTAATTACAGTGCCTCTATTGATGATTGAATTCTTTATTATTCTTAAGGCCGTTGGTGCTGCAGTTTCCTCTAGCTCGTTCTGGAGACTACTCATAGGTACCTTGGTCATGCTCATTGGTGGTTACCTTGGTGAAGCAGGCGTTATGTCAGCAAGCCTAGGATTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCAAGTAAAGCCGCAGAAGCTAATGCTGGTGTGAAAGCAGCTTTCAATGCGCTGAGACTTATCGTGCTCGTT LITVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKAAFNALRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTGCCTCTATTGATGATTGAATTCTTTATTATTCTTAAGGCC---------GTTGGTGCTGCAGTTTCCTCT---AGCTCG------------------------------------TTCTGGAGA---CTACTCATAGGTACCTTGGTCATGCTCATTGGTGGTTACCTTGGTGAA---------GCA------------------GGC------GTT---------------------------------ATG------------------------------------------------------------------TCAGCA------------------AGCCTAGGA---TTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCAAGTAAAGCCGCA------------GAA---GCTAATGCTGGTGTG---AAA---GCA---GCT---TTC---AAT---GCGCTG---AGACTTATCGTGCTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-A-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ929993 [unk-env3-b] PRGD_OTU383_bd7323352b5f4cc3b679f5ff81c892bd gb|KJ929993| PRGD_OTU383_bd7323352b5f4cc3b679f5ff81c892bd, putative proteorhodopsin gene, partial cds. PRGD_OTU383_bd7323352b5f4cc3b679f5ff81c892bd, putative proteorhodopsin gene, partial cds. KJ929993 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) CTAATTACAGTGCCTCTATTGATGATTGAATTCTTTATTATTCTTAAGGCCGTTGGTGCTGCAGTTTCCTCTAGCTCGTTCTGGAGACTACTCATAGGTACCCTGGTTATGCTCATTGGTGGCTACCTTGGTGAAGCAGGCATTATGTCAGCAAGCCTAGGATTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCAAGTAAAGCCGCAGAAGCTAATGCTGGTGTGAAAGCAGCTTTCAATGCGCTGAGACTTATCGTGCTCGTT LITVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGIMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKAAFNALRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTGCCTCTATTGATGATTGAATTCTTTATTATTCTTAAGGCC---------GTTGGTGCTGCAGTTTCCTCT---AGCTCG------------------------------------TTCTGGAGA---CTACTCATAGGTACCCTGGTTATGCTCATTGGTGGCTACCTTGGTGAA---------GCA------------------GGC------ATT---------------------------------ATG------------------------------------------------------------------TCAGCA------------------AGCCTAGGA---TTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCAAGTAAAGCCGCA------------GAA---GCTAATGCTGGTGTG---AAA---GCA---GCT---TTC---AAT---GCGCTG---AGACTTATCGTGCTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--I-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-A-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ929978 [unk-env3-b] PRGD_OTU383_542db9d24460be61a21cff3b0d1035f1 gb|KJ929978| PRGD_OTU383_542db9d24460be61a21cff3b0d1035f1, putative proteorhodopsin gene, partial cds. PRGD_OTU383_542db9d24460be61a21cff3b0d1035f1, putative proteorhodopsin gene, partial cds. KJ929978 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATTACAGTGCCTCTATTGATGATTGAATTCTTTATTATTCTTAAGGCAGTTGGTGCTGCAGTTTCCTCAAGCTCGTTCTGGAGACTACTCATAGGTACCCTGGTCATGCTCATTGGTGGTTATCTTGGTGAAGCAGGCGTTATGTCAGCAAGCCTAGGATTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATATTTGGTGGAGAGGCAAGTAAAGCTGCAGAAGCTAATGCTGGTGTGAAAGCGGCTTTCAATGCGCTGAGACTTATCGTGCTCGTT LITVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKAAFNALRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTGCCTCTATTGATGATTGAATTCTTTATTATTCTTAAGGCA---------GTTGGTGCTGCAGTTTCCTCA---AGCTCG------------------------------------TTCTGGAGA---CTACTCATAGGTACCCTGGTCATGCTCATTGGTGGTTATCTTGGTGAA---------GCA------------------GGC------GTT---------------------------------ATG------------------------------------------------------------------TCAGCA------------------AGCCTAGGA---TTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATA---------------TTT------GGT---GGAGAGGCAAGTAAAGCTGCA------------GAA---GCTAATGCTGGTGTG---AAA---GCG---GCT---TTC---AAT---GCGCTG---AGACTTATCGTGCTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-A-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ929979 [unk-env3-b] PRGD_OTU383_5ab06910c3a0de95af17e3bc7ecaec9c gb|KJ929979| PRGD_OTU383_5ab06910c3a0de95af17e3bc7ecaec9c, putative proteorhodopsin gene, partial cds. PRGD_OTU383_5ab06910c3a0de95af17e3bc7ecaec9c, putative proteorhodopsin gene, partial cds. KJ929979 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) CTAATTACAGTGCCTCTATTAATGATTGAATTCTTTATTATTCTTAAGGCCGTAGGTGCTGCAGTTTCCTCTAGCTCGTTCTGGAGACTTCTCATAGGTACCCTGGTCATGCTCATTGGTGGTTACCTTGGTGAAGCAGGCGTTATGTCAGCAAGCCTAGGATTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCAAGTAAAGCCGCAGAGGCTAATGCTGGTGTGAAAGCAGCTTTCAATGCGCTGAGACTTATCGTGCTCGTT LITVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKAAFNALRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTGCCTCTATTAATGATTGAATTCTTTATTATTCTTAAGGCC---------GTAGGTGCTGCAGTTTCCTCT---AGCTCG------------------------------------TTCTGGAGA---CTTCTCATAGGTACCCTGGTCATGCTCATTGGTGGTTACCTTGGTGAA---------GCA------------------GGC------GTT---------------------------------ATG------------------------------------------------------------------TCAGCA------------------AGCCTAGGA---TTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCAAGTAAAGCCGCA------------GAG---GCTAATGCTGGTGTG---AAA---GCA---GCT---TTC---AAT---GCGCTG---AGACTTATCGTGCTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-A-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ929985 [unk-env3-b] PRGD_OTU383_7cb7e656d849349e6efc0f57fa75bf9b gb|KJ929985| PRGD_OTU383_7cb7e656d849349e6efc0f57fa75bf9b, putative proteorhodopsin gene, partial cds. PRGD_OTU383_7cb7e656d849349e6efc0f57fa75bf9b, putative proteorhodopsin gene, partial cds. KJ929985 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATTACAGTGCCATTATTAATGATTGAATTCTTTATTATTCTTAAGGCCGTAGGTGCTGCAGTCTCCTCAAGCTCGTTCTGGAGACTACTCATAGGTACCCTGGTCATGCTCATTGGTGGTTACCTTGGTGAAGCAGGCGTTATGTCAGCAAGCCTAGGATTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCAAGTAAAGCCGCAGAAGCTAATGCTGGTGTGAAAGCAGCTTTCAATGCGCTGAGACTTATCGTGCTCGTT LITVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKAAFNALRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTGCCATTATTAATGATTGAATTCTTTATTATTCTTAAGGCC---------GTAGGTGCTGCAGTCTCCTCA---AGCTCG------------------------------------TTCTGGAGA---CTACTCATAGGTACCCTGGTCATGCTCATTGGTGGTTACCTTGGTGAA---------GCA------------------GGC------GTT---------------------------------ATG------------------------------------------------------------------TCAGCA------------------AGCCTAGGA---TTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCAAGTAAAGCCGCA------------GAA---GCTAATGCTGGTGTG---AAA---GCA---GCT---TTC---AAT---GCGCTG---AGACTTATCGTGCTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-A-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ929984 [unk-env3-b] PRGD_OTU383_74562591e54340a50e4969b01785de2c gb|KJ929984| PRGD_OTU383_74562591e54340a50e4969b01785de2c, putative proteorhodopsin gene, partial cds. PRGD_OTU383_74562591e54340a50e4969b01785de2c, putative proteorhodopsin gene, partial cds. KJ929984 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) CTAATTACAGTGCCATTATTAATGATTGAATTCTTTATTATTCTTAAGGCTGTAGGTGCTGCAGTTTCCTCAAGTTCATTCTGGAGACTACTCATAGGTACCCTGGTCATGCTCATTGGTGGTTACCTTGGTGAAGCAGGCGTTATGTCAGCAAGCCTAGGATTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCAAGTAAAGCCGCAGAAGCTAATGCTGGTGTGAAAGCAGCTTTCAATGCGCTGAGACTGATTGTGCTCGTT LITVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKAAFNALRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTGCCATTATTAATGATTGAATTCTTTATTATTCTTAAGGCT---------GTAGGTGCTGCAGTTTCCTCA---AGTTCA------------------------------------TTCTGGAGA---CTACTCATAGGTACCCTGGTCATGCTCATTGGTGGTTACCTTGGTGAA---------GCA------------------GGC------GTT---------------------------------ATG------------------------------------------------------------------TCAGCA------------------AGCCTAGGA---TTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCAAGTAAAGCCGCA------------GAA---GCTAATGCTGGTGTG---AAA---GCA---GCT---TTC---AAT---GCGCTG---AGACTGATTGTGCTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-A-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ929981 [unk-env3-b] PRGD_OTU383_63808f0231f2e731a29b73cd5506d4d0 gb|KJ929981| PRGD_OTU383_63808f0231f2e731a29b73cd5506d4d0, putative proteorhodopsin gene, partial cds. PRGD_OTU383_63808f0231f2e731a29b73cd5506d4d0, putative proteorhodopsin gene, partial cds. KJ929981 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTAATTACAGTACCGCTATTAATGATTGAATTCTTTATTATTCTTAAGGCTGTAGGTGCTGCAGTTTCCTCAAGTTCATTCTGGAGACTACTCATAGGTACCCTGGTCATGCTCATTGGTGGCTACCTTGGTGAAGCAGGCGTTATGTCAGCAAGCCTAGGATTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCAAGTAAAGCCGCAGAAGCTAATGCTGGTGTGAAAGCAGCTTTCAATGCGCTGAGACTGATTGTGCTCGTT LITVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKAAFNALRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTACCGCTATTAATGATTGAATTCTTTATTATTCTTAAGGCT---------GTAGGTGCTGCAGTTTCCTCA---AGTTCA------------------------------------TTCTGGAGA---CTACTCATAGGTACCCTGGTCATGCTCATTGGTGGCTACCTTGGTGAA---------GCA------------------GGC------GTT---------------------------------ATG------------------------------------------------------------------TCAGCA------------------AGCCTAGGA---TTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCAAGTAAAGCCGCA------------GAA---GCTAATGCTGGTGTG---AAA---GCA---GCT---TTC---AAT---GCGCTG---AGACTGATTGTGCTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-A-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ930000 [unk-env3-b] PRGD_OTU383_e05fe611e86da196a1125b241a8708df gb|KJ930000| PRGD_OTU383_e05fe611e86da196a1125b241a8708df, putative proteorhodopsin gene, partial cds. PRGD_OTU383_e05fe611e86da196a1125b241a8708df, putative proteorhodopsin gene, partial cds. KJ930000 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637; -33.9602, -73.3769), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) CTAATTACAGTACCTCTATTAATGATTGAATTCTTTATTATTCTTAAGGCTGTAGGTGCTGCAGTTTCCTCAAGTTCATTCTGGAGACTACTCATAGGTACCCTGGTCATGCTCATTGGTGGTTACCTTGGTGAAGCAGGCGTTATGTCAGCAAGCCTAGGATTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCAAGTAAAGCCGCAGAAGCTAATGCTGGTGTGAAAGCAGCTTTCAATGCGCTGAGACTGATCGTGCTCGTT LITVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKAAFNALRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTACCTCTATTAATGATTGAATTCTTTATTATTCTTAAGGCT---------GTAGGTGCTGCAGTTTCCTCA---AGTTCA------------------------------------TTCTGGAGA---CTACTCATAGGTACCCTGGTCATGCTCATTGGTGGTTACCTTGGTGAA---------GCA------------------GGC------GTT---------------------------------ATG------------------------------------------------------------------TCAGCA------------------AGCCTAGGA---TTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCAAGTAAAGCCGCA------------GAA---GCTAATGCTGGTGTG---AAA---GCA---GCT---TTC---AAT---GCGCTG---AGACTGATCGTGCTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-A-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ929975 [unk-env3-b] PRGD_OTU383_40aba83a1caf1993014692844a3544b3 gb|KJ929975| PRGD_OTU383_40aba83a1caf1993014692844a3544b3, putative proteorhodopsin gene, partial cds. PRGD_OTU383_40aba83a1caf1993014692844a3544b3, putative proteorhodopsin gene, partial cds. KJ929975 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -33.9602, -73.3769), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) CTAATTACAGTACCTCTATTAATGATTGAATTCTTTATCATTCTTAAGGCTGTAGGTGCTGCAGTTTCCTCAAGTTCATTCTGGAGACTACTCATAGGTACCCTAGTCATGCTCATTGGTGGTTACCTTGGTGAAGCAGGCGTTATGTCAGCAAGCCTAGGATTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCAAGTAAAGCCGCAGAAGCTAATGCTGGTGTGAAAGCAGCTTTCAATGCGCTGAGACTGATCGTGCTCGTT LITVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKAAFNALRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTACCTCTATTAATGATTGAATTCTTTATCATTCTTAAGGCT---------GTAGGTGCTGCAGTTTCCTCA---AGTTCA------------------------------------TTCTGGAGA---CTACTCATAGGTACCCTAGTCATGCTCATTGGTGGTTACCTTGGTGAA---------GCA------------------GGC------GTT---------------------------------ATG------------------------------------------------------------------TCAGCA------------------AGCCTAGGA---TTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCAAGTAAAGCCGCA------------GAA---GCTAATGCTGGTGTG---AAA---GCA---GCT---TTC---AAT---GCGCTG---AGACTGATCGTGCTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-A-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ929996 [unk-env3-b] PRGD_OTU383_cd515594ae676a30fe13734195743c54 gb|KJ929996| PRGD_OTU383_cd515594ae676a30fe13734195743c54, putative proteorhodopsin gene, partial cds. PRGD_OTU383_cd515594ae676a30fe13734195743c54, putative proteorhodopsin gene, partial cds. KJ929996 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTAATTACAGTGCCTCTATTAATGATTGAATTCTTTATTATTCTTAAGGCTGTAGGTGCTGCAGTCTCCTCAAGTTCATTCTGGAGACTACTCATAGGTACCCTGGTCATGCTCATTGGTGGTTACCTTGGTGAAGCAGGCGTTATGTCAGCAAGCCTAGGATTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCAAGTAAAGCCGCAGAAGCTAATGCTGGTGTAAAAGCAGCTTTCAATGCGCTGAGACTTATCGTGCTCGTT LITVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKAAFNALRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTGCCTCTATTAATGATTGAATTCTTTATTATTCTTAAGGCT---------GTAGGTGCTGCAGTCTCCTCA---AGTTCA------------------------------------TTCTGGAGA---CTACTCATAGGTACCCTGGTCATGCTCATTGGTGGTTACCTTGGTGAA---------GCA------------------GGC------GTT---------------------------------ATG------------------------------------------------------------------TCAGCA------------------AGCCTAGGA---TTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCAAGTAAAGCCGCA------------GAA---GCTAATGCTGGTGTA---AAA---GCA---GCT---TTC---AAT---GCGCTG---AGACTTATCGTGCTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-A-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ929968 [unk-env3-b] PRGD_OTU383_0a28bc26b2d08c195cc0a0eaf015cacc gb|KJ929968| PRGD_OTU383_0a28bc26b2d08c195cc0a0eaf015cacc, putative proteorhodopsin gene, partial cds. PRGD_OTU383_0a28bc26b2d08c195cc0a0eaf015cacc, putative proteorhodopsin gene, partial cds. KJ929968 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTAATTACAGTACCTCTATTAATGATTGAATTCTTTATTATTCTTAAGGCTGTAGGTGCTGCAGTCTCCTCAAGTTCATTCTGGAGACTACTCATAGGTACCTTGGTCATGCTCATTGGTGGTTACCTTGGTGAAGCAGGCGTTATGTCAGCAAGCCTAGGATTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCAAGTAAAGCCGCAGAAGCTAATGCTGGTGTGAAAGCAGCTTTCAATGCGCTAAGACTTATCGTGCTCGTT LITVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKAAFNALRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTACCTCTATTAATGATTGAATTCTTTATTATTCTTAAGGCT---------GTAGGTGCTGCAGTCTCCTCA---AGTTCA------------------------------------TTCTGGAGA---CTACTCATAGGTACCTTGGTCATGCTCATTGGTGGTTACCTTGGTGAA---------GCA------------------GGC------GTT---------------------------------ATG------------------------------------------------------------------TCAGCA------------------AGCCTAGGA---TTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCAAGTAAAGCCGCA------------GAA---GCTAATGCTGGTGTG---AAA---GCA---GCT---TTC---AAT---GCGCTA---AGACTTATCGTGCTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-A-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ929983 [unk-env3-b] PRGD_OTU383_6c78fedec8121ea63ec56045b1e663e0 gb|KJ929983| PRGD_OTU383_6c78fedec8121ea63ec56045b1e663e0, putative proteorhodopsin gene, partial cds. PRGD_OTU383_6c78fedec8121ea63ec56045b1e663e0, putative proteorhodopsin gene, partial cds. KJ929983 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATTACAGTGCCTCTATTAATGATTGAATTCTTTATTATTCTTAAGGCTGTAGGTGCTGCAGTCTCCTCAAGTTCATTCTGGAGACTTCTCATAGGTACCCTGGTCATGCTCATTGGTGGTTACCTTGGTGAAGCAGGCGTTATGTCAGCAAGCCTAGGATTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCAAGTAAAGCCGCAGAAGCTAATGCTGGTGTGAAAGCAGCTTTCAATGCGCTGAGACTTATCGTGCTCGTT LITVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKAAFNALRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTGCCTCTATTAATGATTGAATTCTTTATTATTCTTAAGGCT---------GTAGGTGCTGCAGTCTCCTCA---AGTTCA------------------------------------TTCTGGAGA---CTTCTCATAGGTACCCTGGTCATGCTCATTGGTGGTTACCTTGGTGAA---------GCA------------------GGC------GTT---------------------------------ATG------------------------------------------------------------------TCAGCA------------------AGCCTAGGA---TTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCAAGTAAAGCCGCA------------GAA---GCTAATGCTGGTGTG---AAA---GCA---GCT---TTC---AAT---GCGCTG---AGACTTATCGTGCTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-A-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ929994 [unk-env3-b] PRGD_OTU383_c5f8c5801d199432b7848391dc366f21 gb|KJ929994| PRGD_OTU383_c5f8c5801d199432b7848391dc366f21, putative proteorhodopsin gene, partial cds. PRGD_OTU383_c5f8c5801d199432b7848391dc366f21, putative proteorhodopsin gene, partial cds. KJ929994 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) CTAATTACAGTGCCTCTATTAATGATTGAATTCTTTATTATTCTTAAGGCTGTAGGTGCTGCTGTCTCCTCAAGTTCATTCTGGAGACTACTCATAGGTACCCTGGTCATGCTCATTGGTGGTTACCTTGGTGAAGCAGGCGTTATGTCAGCAAGCCTAGGATTCATTATAGGCATGATTGGTTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCAAGTAAAGCCGCAGAAGCTAATGCTGGTGTGAAAGCAGCTTTCAATGCGCTGAGACTTATCGTGCTCGTT LITVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKAAFNALRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTGCCTCTATTAATGATTGAATTCTTTATTATTCTTAAGGCT---------GTAGGTGCTGCTGTCTCCTCA---AGTTCA------------------------------------TTCTGGAGA---CTACTCATAGGTACCCTGGTCATGCTCATTGGTGGTTACCTTGGTGAA---------GCA------------------GGC------GTT---------------------------------ATG------------------------------------------------------------------TCAGCA------------------AGCCTAGGA---TTCATTATAGGCATGATTGGTTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCAAGTAAAGCCGCA------------GAA---GCTAATGCTGGTGTG---AAA---GCA---GCT---TTC---AAT---GCGCTG---AGACTTATCGTGCTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-A-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ929989 [unk-env3-b] PRGD_OTU383_97ae0dfb0164ac0abf8049e51bf9a48d gb|KJ929989| PRGD_OTU383_97ae0dfb0164ac0abf8049e51bf9a48d, putative proteorhodopsin gene, partial cds. PRGD_OTU383_97ae0dfb0164ac0abf8049e51bf9a48d, putative proteorhodopsin gene, partial cds. KJ929989 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (70.9139, -128.9264), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45) CTAATTACAGTGCCTCTATTGATGATTGAATTCTTTATTATTCTTAAGGCTGTAGGTGCTGCAGTTTCCTCAAGTTCATTCTGGAGACTACTCATAGGTACTCTAGTCATGCTCATTGGTGGTTACCTCGGTGAAGCAGGCGTTATGTCAGCAAGCCTAGGATTCATCATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCTAGTAAAGCCGCAGAAGCTAATGCGGGTGTGAAAGCAGCTTTCAATGCGCTGAGACTTATCGTGCTCGTT LITVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKAAFNALRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTGCCTCTATTGATGATTGAATTCTTTATTATTCTTAAGGCT---------GTAGGTGCTGCAGTTTCCTCA---AGTTCA------------------------------------TTCTGGAGA---CTACTCATAGGTACTCTAGTCATGCTCATTGGTGGTTACCTCGGTGAA---------GCA------------------GGC------GTT---------------------------------ATG------------------------------------------------------------------TCAGCA------------------AGCCTAGGA---TTCATCATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCTAGTAAAGCCGCA------------GAA---GCTAATGCGGGTGTG---AAA---GCA---GCT---TTC---AAT---GCGCTG---AGACTTATCGTGCTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-A-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ930002 [unk-env3-b] PRGD_OTU383_e4e354faf05088903cc20d6c0e2e9d41 gb|KJ930002| PRGD_OTU383_e4e354faf05088903cc20d6c0e2e9d41, putative proteorhodopsin gene, partial cds. PRGD_OTU383_e4e354faf05088903cc20d6c0e2e9d41, putative proteorhodopsin gene, partial cds. KJ930002 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) CTAATTACAGTGCCTCTATTGATGATTGAATTCTTTATTATTCTTAAGGCTGTAGGTGCTGCAGTTTCCTCAAGTTCATTCTGGAGACTACTCATAGGTACCCTAGTCATGCTCATTGGTGGTTACCTTGGCGAAGCAGGCGTTATGTCAGCAAGCCTAGGATTCATTATTGGTATGGTTGGTTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCTAGTAAAGCTGCAGAAGCTAATGCTGGTGTGAAAGCAGCTTTTAATGCGCTGAGACTCATCGTGCTCGTT LITVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMVGWAVIIWEIFGGEASKAAEANAGVKAAFNALRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTGCCTCTATTGATGATTGAATTCTTTATTATTCTTAAGGCT---------GTAGGTGCTGCAGTTTCCTCA---AGTTCA------------------------------------TTCTGGAGA---CTACTCATAGGTACCCTAGTCATGCTCATTGGTGGTTACCTTGGCGAA---------GCA------------------GGC------GTT---------------------------------ATG------------------------------------------------------------------TCAGCA------------------AGCCTAGGA---TTCATTATTGGTATGGTTGGTTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCTAGTAAAGCTGCA------------GAA---GCTAATGCTGGTGTG---AAA---GCA---GCT---TTT---AAT---GCGCTG---AGACTCATCGTGCTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMVGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-A-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ929976 [unk-env3-b] PRGD_OTU383_481ff5222758a7b064a84328ba989303 gb|KJ929976| PRGD_OTU383_481ff5222758a7b064a84328ba989303, putative proteorhodopsin gene, partial cds. PRGD_OTU383_481ff5222758a7b064a84328ba989303, putative proteorhodopsin gene, partial cds. KJ929976 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTGCCTCTATTGATGATTGAATTCTTTATTATCCTTAAAGCCGTTGGTGCTGCAGTCTCTACAAGTTCATTCTGGAGACTCCTCATAGGTACCCTAGTCATGCTCATTGGTGGTTACCTTGGTGAAGCACAAGTCATTTCAGCTAGCATGGGATTCATTATTGGTATGATTGGCTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCTAGTAAAGCCGCAGAAGCTAATGCAGGTGTGAAGGCAGCTTTCAATGCGCTGAGACTTATCGTGCTCGTT LITVPLLMIEFFIILKAVGAAVSTSSFWRLLIGTLVMLIGGYLGEAQVISASMGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKAAFNALRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCTCTATTGATGATTGAATTCTTTATTATCCTTAAAGCC---------GTTGGTGCTGCAGTCTCTACA---AGTTCA------------------------------------TTCTGGAGA---CTCCTCATAGGTACCCTAGTCATGCTCATTGGTGGTTACCTTGGTGAA---------GCA------------------CAA------GTC---------------------------------ATT------------------------------------------------------------------TCAGCT------------------AGCATGGGA---TTCATTATTGGTATGATTGGCTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCTAGTAAAGCCGCA------------GAA---GCTAATGCAGGTGTG---AAG---GCA---GCT---TTC---AAT---GCGCTG---AGACTTATCGTGCTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVST-SS------------FWR-LLIGTLVMLIGGYLGE---A------Q--V-----------I----------------------SA------SMG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-A-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ929986 [unk-env3-b] PRGD_OTU383_8124ec6d450706a813cfdcfabddff403 gb|KJ929986| PRGD_OTU383_8124ec6d450706a813cfdcfabddff403, putative proteorhodopsin gene, partial cds. PRGD_OTU383_8124ec6d450706a813cfdcfabddff403, putative proteorhodopsin gene, partial cds. KJ929986 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) TTAATTACAGTGCCTCTATTGATGATTGAATTCTTTATTATCCTTAAAGCTGTAGGTGCTGCAGTCTCTACAAGTTCATTCTGGAGACTCCTCATAGGTACCCTAGTCATGCTCATTGGTGGTTACCTTGGTGAAGCACAAGTCATTTCAGCTAGCATGGGATTCATTATTGGTATGATTGGCTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCTAGTAAAGCCGCAGAAGCTAATGCAGGTGTGAAAGCAGCTTTCAATGCGCTGAGACTGATCGTACTCGTT LITVPLLMIEFFIILKAVGAAVSTSSFWRLLIGTLVMLIGGYLGEAQVISASMGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKAAFNALRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCTCTATTGATGATTGAATTCTTTATTATCCTTAAAGCT---------GTAGGTGCTGCAGTCTCTACA---AGTTCA------------------------------------TTCTGGAGA---CTCCTCATAGGTACCCTAGTCATGCTCATTGGTGGTTACCTTGGTGAA---------GCA------------------CAA------GTC---------------------------------ATT------------------------------------------------------------------TCAGCT------------------AGCATGGGA---TTCATTATTGGTATGATTGGCTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCTAGTAAAGCCGCA------------GAA---GCTAATGCAGGTGTG---AAA---GCA---GCT---TTC---AAT---GCGCTG---AGACTGATCGTACTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVST-SS------------FWR-LLIGTLVMLIGGYLGE---A------Q--V-----------I----------------------SA------SMG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-A-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ930004 [unk-env3-b] PRGD_OTU383_e6a7fd88497c4050efaa6ed54ccef7b3 gb|KJ930004| PRGD_OTU383_e6a7fd88497c4050efaa6ed54ccef7b3, putative proteorhodopsin gene, partial cds. PRGD_OTU383_e6a7fd88497c4050efaa6ed54ccef7b3, putative proteorhodopsin gene, partial cds. KJ930004 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTGCCTCTATTGATGATTGAATTCTTTATTATTCTTAAGGCCGTTGGTGCCGCAGTCTCTTCAAGTTCATTCTGGAGACTACTCATAGGTACCTTAGTTATGCTAATTGGTGGTTACCTTGGTGAAGCAGGCGTCATGTCAGCTAGCCTAGGGTTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCAAGTAAAGCCGCAGAAGCCAATGCTGGTGTTAAGGCAGCTTTCAATGCGCTTAGACTTATCGTACTCGTT LITVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKAAFNALRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCTCTATTGATGATTGAATTCTTTATTATTCTTAAGGCC---------GTTGGTGCCGCAGTCTCTTCA---AGTTCA------------------------------------TTCTGGAGA---CTACTCATAGGTACCTTAGTTATGCTAATTGGTGGTTACCTTGGTGAA---------GCA------------------GGC------GTC---------------------------------ATG------------------------------------------------------------------TCAGCT------------------AGCCTAGGG---TTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCAAGTAAAGCCGCA------------GAA---GCCAATGCTGGTGTT---AAG---GCA---GCT---TTC---AAT---GCGCTT---AGACTTATCGTACTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-A-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ929999 [unk-env3-b] PRGD_OTU383_dd6fe8b4f6ac91bf1e7fcfdd9d9b7ee4 gb|KJ929999| PRGD_OTU383_dd6fe8b4f6ac91bf1e7fcfdd9d9b7ee4, putative proteorhodopsin gene, partial cds. PRGD_OTU383_dd6fe8b4f6ac91bf1e7fcfdd9d9b7ee4, putative proteorhodopsin gene, partial cds. KJ929999 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419) TTAATTACAGTGCCTCTATTGATGATTGAATTCTTTATTATTCTTAAGGCGGTTGGTGCCGCAGTCTCTTCAAGTTCATTCTGGAGACTACTCATAGGTACCTTAGTTATGCTAATTGGTGGCTACCTTGGTGAAGCAGGCGTTATGTCGGCTAGCCTAGGATTCATTATAGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCAAGTAAAGCCGCAGAAGCTAATGCAGGTGTAAAAGCAGCTTTCAATGCGCTTAGACTAATCGTCCTCGTT LITVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKAAFNALRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCTCTATTGATGATTGAATTCTTTATTATTCTTAAGGCG---------GTTGGTGCCGCAGTCTCTTCA---AGTTCA------------------------------------TTCTGGAGA---CTACTCATAGGTACCTTAGTTATGCTAATTGGTGGCTACCTTGGTGAA---------GCA------------------GGC------GTT---------------------------------ATG------------------------------------------------------------------TCGGCT------------------AGCCTAGGA---TTCATTATAGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCAAGTAAAGCCGCA------------GAA---GCTAATGCAGGTGTA---AAA---GCA---GCT---TTC---AAT---GCGCTT---AGACTAATCGTCCTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-A-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ930006 [unk-env3-b] PRGD_OTU383_ecc38e0825b5dd876e4db9ee60230086 gb|KJ930006| PRGD_OTU383_ecc38e0825b5dd876e4db9ee60230086, putative proteorhodopsin gene, partial cds. PRGD_OTU383_ecc38e0825b5dd876e4db9ee60230086, putative proteorhodopsin gene, partial cds. KJ930006 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637), North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097), Arctic Ocean-Pacific side (70.9139, -128.9264; ; ; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATTACAGTGCCTCTATTGATGATTGAATTCTTTATTATTCTTAAGGCGGTTGGTGCTGCAGTCTCTTCAAGTTCATTCTGGAGACTACTCATAGGTACCCTAGTTATGCTAATTGGTGGTTACCTTGGTGAAGCAGGCGTTATGTCGGCTAGCCTAGGATTCATTATAGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCAAGTAAAGCCGCAGAAGCTAATGCAGGTGTAAAAGCAGCTTTCAATGCGCTTAGACTAATCGTCCTCGTT LITVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKAAFNALRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCTCTATTGATGATTGAATTCTTTATTATTCTTAAGGCG---------GTTGGTGCTGCAGTCTCTTCA---AGTTCA------------------------------------TTCTGGAGA---CTACTCATAGGTACCCTAGTTATGCTAATTGGTGGTTACCTTGGTGAA---------GCA------------------GGC------GTT---------------------------------ATG------------------------------------------------------------------TCGGCT------------------AGCCTAGGA---TTCATTATAGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCAAGTAAAGCCGCA------------GAA---GCTAATGCAGGTGTA---AAA---GCA---GCT---TTC---AAT---GCGCTT---AGACTAATCGTCCTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-A-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ929971 [unk-env3-b] PRGD_OTU383_26ee712d5b328a6b4f530ef39d55dd50 gb|KJ929971| PRGD_OTU383_26ee712d5b328a6b4f530ef39d55dd50, putative proteorhodopsin gene, partial cds. PRGD_OTU383_26ee712d5b328a6b4f530ef39d55dd50, putative proteorhodopsin gene, partial cds. KJ929971 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 04-MAY-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACAGTGCCACTATTGATGATTGAATTCTTTATTATTCTTAAGGCGGTTGGTGCCGCAGTTTCTTCCAGTTCATTCTGGAGACTACTCATAGGTACCTTAGTTATGCTAATTGGTGGTTACCTTGGTGAAGCAGGCGTCATGTCAGCTAGCCTAGGATTCATTATAGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCAAGTAAAGCCGCAGAAGCTAATGCAGGTGTAAAAGCAGCTTTCAATGCGCTTAGATTAATCGTCCTCGTT LITVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKAAFNALRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCACTATTGATGATTGAATTCTTTATTATTCTTAAGGCG---------GTTGGTGCCGCAGTTTCTTCC---AGTTCA------------------------------------TTCTGGAGA---CTACTCATAGGTACCTTAGTTATGCTAATTGGTGGTTACCTTGGTGAA---------GCA------------------GGC------GTC---------------------------------ATG------------------------------------------------------------------TCAGCT------------------AGCCTAGGA---TTCATTATAGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCAAGTAAAGCCGCA------------GAA---GCTAATGCAGGTGTA---AAA---GCA---GCT---TTC---AAT---GCGCTT---AGATTAATCGTCCTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-A-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ929980 [unk-env3-b] PRGD_OTU383_5fd39281230982c1d837e0efc040615d gb|KJ929980| PRGD_OTU383_5fd39281230982c1d837e0efc040615d, putative proteorhodopsin gene, partial cds. PRGD_OTU383_5fd39281230982c1d837e0efc040615d, putative proteorhodopsin gene, partial cds. KJ929980 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) TTAATTACAGTGCCACTATTGATGATTGAATTCTTTATTATTCTTAAGGCGGTTGGTGCCGCAGTTTCTTCCAGTTCATTCTGGAGACTACTCATAGGTACCTTAGTTATGCTAATTGGTGGTTACCTTGGTGAAGCAGGCGTTATGTCGGCTAGCCTAGGATTCATTATAGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCAAGTAAAGCCGCAGAAGCTAATGCAGGTGTAAAAGCAGCTTTCAATGCGCTTAGATTAATCGTCCTCGTT LITVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKAAFNALRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCACTATTGATGATTGAATTCTTTATTATTCTTAAGGCG---------GTTGGTGCCGCAGTTTCTTCC---AGTTCA------------------------------------TTCTGGAGA---CTACTCATAGGTACCTTAGTTATGCTAATTGGTGGTTACCTTGGTGAA---------GCA------------------GGC------GTT---------------------------------ATG------------------------------------------------------------------TCGGCT------------------AGCCTAGGA---TTCATTATAGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCAAGTAAAGCCGCA------------GAA---GCTAATGCAGGTGTA---AAA---GCA---GCT---TTC---AAT---GCGCTT---AGATTAATCGTCCTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-A-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ929967 [unk-env3-b] PRGD_OTU383_otuREP_db00e2cb98289fca3e5a8dd015a1f7b9 gb|KJ929967| PRGD_OTU383_otuREP_db00e2cb98289fca3e5a8dd015a1f7b9, putative proteorhodopsin gene, partial cds. PRGD_OTU383_otuREP_db00e2cb98289fca3e5a8dd015a1f7b9, putative proteorhodopsin gene, partial cds. KJ929967 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937; -23.5287, -117.8637; -33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175; 33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45; -33.28, 45.35) TTAATTACAGTGCCTCTATTGATGATTGAATTCTTTATTATTCTTAAGGCGGTTGGTGCCGCAGTCTCTTCAAGTTCATTCTGGAGACTACTCATAGGTACCCTAGTTATGCTAATTGGTGGTTACCTTGGTGAAGCAGGCGTCATGTCAGCTAGCCTAGGATTCATTATAGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCAAGTAAAGCCGCAGAAGCTAATGCAGGTGTAAAAGCAGCTTTCAATGCGCTTAGACTAATCGTCCTCGTT LITVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKAAFNALRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCTCTATTGATGATTGAATTCTTTATTATTCTTAAGGCG---------GTTGGTGCCGCAGTCTCTTCA---AGTTCA------------------------------------TTCTGGAGA---CTACTCATAGGTACCCTAGTTATGCTAATTGGTGGTTACCTTGGTGAA---------GCA------------------GGC------GTC---------------------------------ATG------------------------------------------------------------------TCAGCT------------------AGCCTAGGA---TTCATTATAGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCAAGTAAAGCCGCA------------GAA---GCTAATGCAGGTGTA---AAA---GCA---GCT---TTC---AAT---GCGCTT---AGACTAATCGTCCTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-A-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ930001 [unk-env3-b] PRGD_OTU383_e2e34af430c04d52013b907e1aaf0aff gb|KJ930001| PRGD_OTU383_e2e34af430c04d52013b907e1aaf0aff, putative proteorhodopsin gene, partial cds. PRGD_OTU383_e2e34af430c04d52013b907e1aaf0aff, putative proteorhodopsin gene, partial cds. KJ930001 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) TTAATTACAGTGCCTCTATTGATGATTGAATTCTTTATTATTCTTAAGGCGGTTGGTGCAGCAGTCTCTTCAAGTTCATTTTGGAGACTACTCATAGGTACCTTAGTTATGCTAATTGGTGGTTACCTTGGTGAAGCAGGCGTTATGTCGGCAAGCCTAGGATTCATTATAGGTATGATAGGTTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCAAGTAAAGCCGCAGAAGCTAATGCAGGTGTAAAAGCAGCTTTCAATGCGCTTAGACTAATCGTCCTCGTT LITVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKAAFNALRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCTCTATTGATGATTGAATTCTTTATTATTCTTAAGGCG---------GTTGGTGCAGCAGTCTCTTCA---AGTTCA------------------------------------TTTTGGAGA---CTACTCATAGGTACCTTAGTTATGCTAATTGGTGGTTACCTTGGTGAA---------GCA------------------GGC------GTT---------------------------------ATG------------------------------------------------------------------TCGGCA------------------AGCCTAGGA---TTCATTATAGGTATGATAGGTTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCAAGTAAAGCCGCA------------GAA---GCTAATGCAGGTGTA---AAA---GCA---GCT---TTC---AAT---GCGCTT---AGACTAATCGTCCTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-A-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ929987 [unk-env3-b] PRGD_OTU383_8f64d3748a52923cd1db74e08917fb35 gb|KJ929987| PRGD_OTU383_8f64d3748a52923cd1db74e08917fb35, putative proteorhodopsin gene, partial cds. PRGD_OTU383_8f64d3748a52923cd1db74e08917fb35, putative proteorhodopsin gene, partial cds. KJ929987 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637), Arctic Ocean-Atlantic side (71.501, 19.8025), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419) TTAATTACAGTGCCTCTATTGATGATTGAATTCTTTATTATTCTTAAGGCCGTTGGTGCCGCAGTCTCTTCAAGTTCATTTTGGAGACTACTCATAGGTACCTTAGTTATGCTAATTGGTGGTTACCTTGGTGAAGCAGGCGTTATGTCGGCAAGCCTAGGATTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATCTTTGGTGGAGAGGCAAGTAAAGCCGCAGAAGCTAATGCAGGTGTAAAATCAGCTTTCAATGCTCTTAGATTAATCGTCCTCGTT LITVPLLMIEFFIILKAVGAAVSSSSFWRLLIGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKSAFNALRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACAGTGCCTCTATTGATGATTGAATTCTTTATTATTCTTAAGGCC---------GTTGGTGCCGCAGTCTCTTCA---AGTTCA------------------------------------TTTTGGAGA---CTACTCATAGGTACCTTAGTTATGCTAATTGGTGGTTACCTTGGTGAA---------GCA------------------GGC------GTT---------------------------------ATG------------------------------------------------------------------TCGGCA------------------AGCCTAGGA---TTCATTATTGGTATGATTGGTTGGGCTGTTATCATCTGGGAAATC---------------TTT------GGT---GGAGAGGCAAGTAAAGCCGCA------------GAA---GCTAATGCAGGTGTA---AAA---TCA---GCT---TTC---AAT---GCTCTT---AGATTAATCGTCCTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVSS-SS------------FWR-LLIGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-S-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ929997 [unk-env3-b] PRGD_OTU383_d3d6619160008df44fca6c297798a39c gb|KJ929997| PRGD_OTU383_d3d6619160008df44fca6c297798a39c, putative proteorhodopsin gene, partial cds. PRGD_OTU383_d3d6619160008df44fca6c297798a39c, putative proteorhodopsin gene, partial cds. KJ929997 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGGTTACCGTACCTCTATTGATGATTGAATTCTTCATTATCTTAAAGGCAGTCGGTGCCGCAGTGTCTACAAGCTCTTTCTGGAGATTGTTAGTAGGTACGCTAGTTATGCTAATTGGTGGTTACTTAGGTGAAGCAGGTGTTATGTCAGCAAGCCTAGGATTTATTATTGGTATGATTGGTTGGGCAGTCATCATCTGGGAAATCTTTGGCGGAGAAGCAAGTAAAGCTGCTGATGCCAATGCGGGTGTTAAGTCAGCCTTTAATGCACTAAGACTCATTGTATTGGTA LVTVPLLMIEFFIILKAVGAAVSTSSFWRLLVGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAADANAGVKSAFNALRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGGTTACCGTACCTCTATTGATGATTGAATTCTTCATTATCTTAAAGGCA---------GTCGGTGCCGCAGTGTCTACA---AGCTCT------------------------------------TTCTGGAGA---TTGTTAGTAGGTACGCTAGTTATGCTAATTGGTGGTTACTTAGGTGAA---------GCA------------------GGT------GTT---------------------------------ATG------------------------------------------------------------------TCAGCA------------------AGCCTAGGA---TTTATTATTGGTATGATTGGTTGGGCAGTCATCATCTGGGAAATC---------------TTT------GGC---GGAGAAGCAAGTAAAGCTGCT------------GAT---GCCAATGCGGGTGTT---AAG---TCA---GCC---TTT---AAT---GCACTA---AGACTCATTGTATTGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVTVPLLMIEFFIILKA---VGAAVST-SS------------FWR-LLVGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----D-ANAGV-K-S-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ930009 [unk-env3-b] PRGD_OTU383_f64e95f020230b94dacdbb3809a82780 gb|KJ930009| PRGD_OTU383_f64e95f020230b94dacdbb3809a82780, putative proteorhodopsin gene, partial cds. PRGD_OTU383_f64e95f020230b94dacdbb3809a82780, putative proteorhodopsin gene, partial cds. KJ930009 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGGTTACCGTACCTCTATTAATGATTGAATTCTTCATTATCTTAAAGGCGGTCGGTGCCGCAGTGTCTACAAGCTCTTTCTGGAGATTGTTAGTAGGTACGCTAGTCATGCTTATTGGTGGCTATTTAGGTGAAGCGGGCGTTATGTCAGCTAGCCTAGGATTTATCATTGGTATGATCGGTTGGGCAGTCATCATCTGGGAAATCTTTGGCGGAGAAGCAAGCAAAGCTGCTGATGCCAATGCGGGTGTTAAGTCAGCCTTCAACGCACTAAGACTCATTGTTTTAGTA LVTVPLLMIEFFIILKAVGAAVSTSSFWRLLVGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAADANAGVKSAFNALRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGGTTACCGTACCTCTATTAATGATTGAATTCTTCATTATCTTAAAGGCG---------GTCGGTGCCGCAGTGTCTACA---AGCTCT------------------------------------TTCTGGAGA---TTGTTAGTAGGTACGCTAGTCATGCTTATTGGTGGCTATTTAGGTGAA---------GCG------------------GGC------GTT---------------------------------ATG------------------------------------------------------------------TCAGCT------------------AGCCTAGGA---TTTATCATTGGTATGATCGGTTGGGCAGTCATCATCTGGGAAATC---------------TTT------GGC---GGAGAAGCAAGCAAAGCTGCT------------GAT---GCCAATGCGGGTGTT---AAG---TCA---GCC---TTC---AAC---GCACTA---AGACTCATTGTTTTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVTVPLLMIEFFIILKA---VGAAVST-SS------------FWR-LLVGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----D-ANAGV-K-S-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ930005 [unk-env3-b] PRGD_OTU383_e9771054250198f718078d21a9e8f7e2 gb|KJ930005| PRGD_OTU383_e9771054250198f718078d21a9e8f7e2, putative proteorhodopsin gene, partial cds. PRGD_OTU383_e9771054250198f718078d21a9e8f7e2, putative proteorhodopsin gene, partial cds. KJ930005 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025) CTGGTTACCGTACCTCTATTAATGATTGAATTCTTCATTATCTTAAAGGCGGTCGGTGCTGCAGTCTCTACAAGCTCTTTCTGGAGATTGTTAGTCGGTACGCTAGTAATGCTAATCGGTGGTTACTTAGGTGAAGCAGGCGTGATGTCAGCAAGTCTAGGATTTATCATTGGTATGATTGGTTGGGCAGTCATCATCTGGGAAATCTTTGGTGGAGAAGCAAGTAAAGCTGCTGAAGCAAATGCAGGTGTCAAATCAGCCTTTAATGCGTTAAGACTCATTGTTTTAGTT LVTVPLLMIEFFIILKAVGAAVSTSSFWRLLVGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKSAFNALRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGGTTACCGTACCTCTATTAATGATTGAATTCTTCATTATCTTAAAGGCG---------GTCGGTGCTGCAGTCTCTACA---AGCTCT------------------------------------TTCTGGAGA---TTGTTAGTCGGTACGCTAGTAATGCTAATCGGTGGTTACTTAGGTGAA---------GCA------------------GGC------GTG---------------------------------ATG------------------------------------------------------------------TCAGCA------------------AGTCTAGGA---TTTATCATTGGTATGATTGGTTGGGCAGTCATCATCTGGGAAATC---------------TTT------GGT---GGAGAAGCAAGTAAAGCTGCT------------GAA---GCAAATGCAGGTGTC---AAA---TCA---GCC---TTT---AAT---GCGTTA---AGACTCATTGTTTTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVTVPLLMIEFFIILKA---VGAAVST-SS------------FWR-LLVGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-S-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ929982 [unk-env3-b] PRGD_OTU383_68167600b0b160cc56b3b1a6082a2795 gb|KJ929982| PRGD_OTU383_68167600b0b160cc56b3b1a6082a2795, putative proteorhodopsin gene, partial cds. PRGD_OTU383_68167600b0b160cc56b3b1a6082a2795, putative proteorhodopsin gene, partial cds. KJ929982 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175) TTGATTACTGTACCTCTATTGATGATTGAATTCTTCATTATCTTAAAGGCAGTCGGTGCTGCAGTCTCTACAAGCTCTTTCTGGAGATTGTTAGTCGGTACGCTAGTCATGCTAATCGGTGGTTACTTAGGTGAGGCAGGCGTTATGTCAGCAAGTCTAGGGTTTATCATTGGTATGATTGGTTGGGCAGTCATCATCTGGGAAATCTTCGGTGGAGAAGCAAGTAAAGCTGCTGAAGCCAATGCAGGTGTCAAATCAGCATTCAATGCGTTAAGACTTATTGTTTTAGTT LITVPLLMIEFFIILKAVGAAVSTSSFWRLLVGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKSAFNALRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTACCTCTATTGATGATTGAATTCTTCATTATCTTAAAGGCA---------GTCGGTGCTGCAGTCTCTACA---AGCTCT------------------------------------TTCTGGAGA---TTGTTAGTCGGTACGCTAGTCATGCTAATCGGTGGTTACTTAGGTGAG---------GCA------------------GGC------GTT---------------------------------ATG------------------------------------------------------------------TCAGCA------------------AGTCTAGGG---TTTATCATTGGTATGATTGGTTGGGCAGTCATCATCTGGGAAATC---------------TTC------GGT---GGAGAAGCAAGTAAAGCTGCT------------GAA---GCCAATGCAGGTGTC---AAA---TCA---GCA---TTC---AAT---GCGTTA---AGACTTATTGTTTTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVST-SS------------FWR-LLVGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-S-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ929998 [unk-env3-b] PRGD_OTU383_d44adf3bf83d8921304bd101691f8dad gb|KJ929998| PRGD_OTU383_d44adf3bf83d8921304bd101691f8dad, putative proteorhodopsin gene, partial cds. PRGD_OTU383_d44adf3bf83d8921304bd101691f8dad, putative proteorhodopsin gene, partial cds. KJ929998 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 21-MAY-2010 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683) TTGATTACTGTACCTCTATTGATGATTGAATTCTTCATTATCTTAAAGGCAGTCGGTGCTGCAGTCTCTACAAGCTCTTTCTGGAGATTGTTAGTCGGTACGCTAGTCATGCTAATCGGTGGTTACTTAGGTGAGGCAGGCGTTATGTCAGCAAGTCTAGGGTTTATCATTGGTATGATTGGTTGGGCAGTCATCATCTGGGAAATCTTCGGTGGAGAAGCAAGTAAAGCTGCTGAAGCCAATGCAGGTGTTAAATCAGCCTTTAATGCGTTAAGACTCATTGTTTTAGTT LITVPLLMIEFFIILKAVGAAVSTSSFWRLLVGTLVMLIGGYLGEAGVMSASLGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKSAFNALRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTACTGTACCTCTATTGATGATTGAATTCTTCATTATCTTAAAGGCA---------GTCGGTGCTGCAGTCTCTACA---AGCTCT------------------------------------TTCTGGAGA---TTGTTAGTCGGTACGCTAGTCATGCTAATCGGTGGTTACTTAGGTGAG---------GCA------------------GGC------GTT---------------------------------ATG------------------------------------------------------------------TCAGCA------------------AGTCTAGGG---TTTATCATTGGTATGATTGGTTGGGCAGTCATCATCTGGGAAATC---------------TTC------GGT---GGAGAAGCAAGTAAAGCTGCT------------GAA---GCCAATGCAGGTGTT---AAA---TCA---GCC---TTT---AAT---GCGTTA---AGACTCATTGTTTTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVST-SS------------FWR-LLVGTLVMLIGGYLGE---A------G--V-----------M----------------------SA------SLG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-S-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ929972 [unk-env3-b] PRGD_OTU383_2ac99173f750bae5c9f2f8ccced36662 gb|KJ929972| PRGD_OTU383_2ac99173f750bae5c9f2f8ccced36662, putative proteorhodopsin gene, partial cds. PRGD_OTU383_2ac99173f750bae5c9f2f8ccced36662, putative proteorhodopsin gene, partial cds. KJ929972 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATCACTGTACCGCTCTTAATGATCGAGTTCTTTATTATCCTCAAGGCAGTTGGTGCTGCAGTATCGACTAGCTCCTTCTGGAGACTGGTCATCGGTACACTGGTTATGCTGATTGGTGGATACCTCGGTGAAGCTCAAATTATTGGAGCAACTCCAGGATTTATCATTGGAATGATTGGATGGGCAGTGATTATATGGGAGATCTTTGGTGGTGAGGCAAGTAAAGCTGCTGAAGCCAACGCAGGGGTCAAAGCCGCTTTCAATGCTCTGAGATTGATTGTACTCATT LITVPLLMIEFFIILKAVGAAVSTSSFWRLVIGTLVMLIGGYLGEAQIIGATPGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKAAFNALRLIVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCGCTCTTAATGATCGAGTTCTTTATTATCCTCAAGGCA---------GTTGGTGCTGCAGTATCGACT---AGCTCC------------------------------------TTCTGGAGA---CTGGTCATCGGTACACTGGTTATGCTGATTGGTGGATACCTCGGTGAA---------GCT------------------CAA------ATT---------------------------------ATT------------------------------------------------------------------GGAGCA------------------ACTCCAGGA---TTTATCATTGGAATGATTGGATGGGCAGTGATTATATGGGAGATC---------------TTT------GGT---GGTGAGGCAAGTAAAGCTGCT------------GAA---GCCAACGCAGGGGTC---AAA---GCC---GCT---TTC---AAT---GCTCTG---AGATTGATTGTACTCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVST-SS------------FWR-LVIGTLVMLIGGYLGE---A------Q--I-----------I----------------------GA------TPG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-A-A-F-N-AL-RLIVLI-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ929990 [unk-env3-b] PRGD_OTU383_9c5450fc52bd04993acdd7d3b2666634 gb|KJ929990| PRGD_OTU383_9c5450fc52bd04993acdd7d3b2666634, putative proteorhodopsin gene, partial cds. PRGD_OTU383_9c5450fc52bd04993acdd7d3b2666634, putative proteorhodopsin gene, partial cds. KJ929990 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -33.9602, -73.3769), Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) TTAATCACTGTACCGCTCTTAATGATCGAGTTCTTTATTATCCTCAAGGCGGTTGGTGCTGCAGTATCGACTAGCTCCTTCTGGAGATTGGTCATCGGTACACTGGTTATGCTGATTGGTGGATACCTCGGTGAAGCTCAAGTTATTGGAGCAACTCCAGGATTTATCATTGGAATGATTGGATGGGCAGTGATTATATGGGAGATCTTTGGTGGTGAGGCAAGTAAAGCTGCTGAAGCCAATGCAGGTGTCAAAGCCGCCTTCAATGCTCTGAGATTGATTGTACTCATT LITVPLLMIEFFIILKAVGAAVSTSSFWRLVIGTLVMLIGGYLGEAQVIGATPGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKAAFNALRLIVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCGCTCTTAATGATCGAGTTCTTTATTATCCTCAAGGCG---------GTTGGTGCTGCAGTATCGACT---AGCTCC------------------------------------TTCTGGAGA---TTGGTCATCGGTACACTGGTTATGCTGATTGGTGGATACCTCGGTGAA---------GCT------------------CAA------GTT---------------------------------ATT------------------------------------------------------------------GGAGCA------------------ACTCCAGGA---TTTATCATTGGAATGATTGGATGGGCAGTGATTATATGGGAGATC---------------TTT------GGT---GGTGAGGCAAGTAAAGCTGCT------------GAA---GCCAATGCAGGTGTC---AAA---GCC---GCC---TTC---AAT---GCTCTG---AGATTGATTGTACTCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVST-SS------------FWR-LVIGTLVMLIGGYLGE---A------Q--V-----------I----------------------GA------TPG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-A-A-F-N-AL-RLIVLI-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ929973 [unk-env3-b] PRGD_OTU383_31c370ca100303197b2b1840af440da6 gb|KJ929973| PRGD_OTU383_31c370ca100303197b2b1840af440da6, putative proteorhodopsin gene, partial cds. PRGD_OTU383_31c370ca100303197b2b1840af440da6, putative proteorhodopsin gene, partial cds. KJ929973 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) TTAATCACTGTACCGCTCTTAATGATCGAGTTCTTTATTATCCTCAAGGCAGTTGGTGCTGCAGTATCGACTAGCTCCTTCTGGAGACTGGTCATCGGTACACTGGTTATGCTGATTGGTGGATACCTCGGTGAAGCTCAAATTATTGGAGCAACTCCAGGATTCATTATCGGAATGATTGGATGGGCAGTGATTATATGGGAGATCTTTGGTGGTGAGGCAAGTAAAGCTGCTGAAGCCAACGCAGGGGTCAAAGCCGCTTTCAATGCTCTGAGATTGATTGTACTCATT LITVPLLMIEFFIILKAVGAAVSTSSFWRLVIGTLVMLIGGYLGEAQIIGATPGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKAAFNALRLIVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCGCTCTTAATGATCGAGTTCTTTATTATCCTCAAGGCA---------GTTGGTGCTGCAGTATCGACT---AGCTCC------------------------------------TTCTGGAGA---CTGGTCATCGGTACACTGGTTATGCTGATTGGTGGATACCTCGGTGAA---------GCT------------------CAA------ATT---------------------------------ATT------------------------------------------------------------------GGAGCA------------------ACTCCAGGA---TTCATTATCGGAATGATTGGATGGGCAGTGATTATATGGGAGATC---------------TTT------GGT---GGTGAGGCAAGTAAAGCTGCT------------GAA---GCCAACGCAGGGGTC---AAA---GCC---GCT---TTC---AAT---GCTCTG---AGATTGATTGTACTCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVST-SS------------FWR-LVIGTLVMLIGGYLGE---A------Q--I-----------I----------------------GA------TPG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-A-A-F-N-AL-RLIVLI-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ929969 [unk-env3-b] PRGD_OTU383_0e6571b2c109dc54bfa268f94524858d gb|KJ929969| PRGD_OTU383_0e6571b2c109dc54bfa268f94524858d, putative proteorhodopsin gene, partial cds. PRGD_OTU383_0e6571b2c109dc54bfa268f94524858d, putative proteorhodopsin gene, partial cds. KJ929969 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATCACTGTACCGCTCTTAATGATCGAGTTCTTTATTATCCTCAAGGCAGTTGGTGCTGCAGTATCGACTAGCTCCTTCTGGAGACTGGTTATCGGTACACTGGTTATGCTGATTGGTGGATACCTCGGTGAAGCTCAAATTATTGGAGCAACGCCAGGATTCATTATCGGAATGATTGGATGGGCAGTGATTATATGGGAGATCTTTGGTGGCGAGGCAAGTAAAGCTGCTGAAGCCAACGCAGGGGTCAAAGCCGCTTTCAATGCTCTGAGATTGATTGTACTCATT LITVPLLMIEFFIILKAVGAAVSTSSFWRLVIGTLVMLIGGYLGEAQIIGATPGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKAAFNALRLIVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTACCGCTCTTAATGATCGAGTTCTTTATTATCCTCAAGGCA---------GTTGGTGCTGCAGTATCGACT---AGCTCC------------------------------------TTCTGGAGA---CTGGTTATCGGTACACTGGTTATGCTGATTGGTGGATACCTCGGTGAA---------GCT------------------CAA------ATT---------------------------------ATT------------------------------------------------------------------GGAGCA------------------ACGCCAGGA---TTCATTATCGGAATGATTGGATGGGCAGTGATTATATGGGAGATC---------------TTT------GGT---GGCGAGGCAAGTAAAGCTGCT------------GAA---GCCAACGCAGGGGTC---AAA---GCC---GCT---TTC---AAT---GCTCTG---AGATTGATTGTACTCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVST-SS------------FWR-LVIGTLVMLIGGYLGE---A------Q--I-----------I----------------------GA------TPG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-A-A-F-N-AL-RLIVLI-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ930008 [unk-env3-b] PRGD_OTU383_f41f733a778127868b88329ead321376 gb|KJ930008| PRGD_OTU383_f41f733a778127868b88329ead321376, putative proteorhodopsin gene, partial cds. PRGD_OTU383_f41f733a778127868b88329ead321376, putative proteorhodopsin gene, partial cds. KJ930008 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73; -14.48, 113.45) TTAATCACTGTGCCGCTCTTAATGATCGAGTTCTTTATTATCCTCAAGGCAGTTGGTGCTGCAGTATCGACTAGCTCCTTCTGGAGATTAGTCATTGGTACACTGGTTATGCTGATTGGTGGATACCTCGGTGAAGCCCAAATTATTGGAGCAACTCCAGGATTCATTATCGGAATGATTGGATGGGCAGTGATTATATGGGAGATCTTTGGTGGTGAGGCAAGTAAAGCTGCTGAAGCCAACGCAGGGGTCAAATCCGCTTTCAATGCTCTGAGATTGATTGTACTCGTT LITVPLLMIEFFIILKAVGAAVSTSSFWRLVIGTLVMLIGGYLGEAQIIGATPGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKSAFNALRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCGCTCTTAATGATCGAGTTCTTTATTATCCTCAAGGCA---------GTTGGTGCTGCAGTATCGACT---AGCTCC------------------------------------TTCTGGAGA---TTAGTCATTGGTACACTGGTTATGCTGATTGGTGGATACCTCGGTGAA---------GCC------------------CAA------ATT---------------------------------ATT------------------------------------------------------------------GGAGCA------------------ACTCCAGGA---TTCATTATCGGAATGATTGGATGGGCAGTGATTATATGGGAGATC---------------TTT------GGT---GGTGAGGCAAGTAAAGCTGCT------------GAA---GCCAACGCAGGGGTC---AAA---TCC---GCT---TTC---AAT---GCTCTG---AGATTGATTGTACTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVST-SS------------FWR-LVIGTLVMLIGGYLGE---A------Q--I-----------I----------------------GA------TPG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-S-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-b]_KJ929991 [unk-env3-b] PRGD_OTU383_ad1f88b898201f9b5cbb24ae7cabf72d gb|KJ929991| PRGD_OTU383_ad1f88b898201f9b5cbb24ae7cabf72d, putative proteorhodopsin gene, partial cds. PRGD_OTU383_ad1f88b898201f9b5cbb24ae7cabf72d, putative proteorhodopsin gene, partial cds. KJ929991 [[root proteorhodopsin/env cluster 3/B subcluster]] root proteorhodopsin env cluster 3 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATCACTGTGCCGCTCTTAATGATCGAGTTCTTTATTATCCTCAAGGCAGTTGGTGCTGCAGTATCGACTAGTTCCTTCTGGAGATTGGTCATCGGTACGCTGGTTATGCTGATTGGTGGGTACCTCGGTGAAGCCCAAATTATTGGAGCAACTCCAGGATTCATTATCGGAATGATTGGATGGGCAGTGATTATATGGGAGATCTTTGGTGGTGAGGCAAGTAAAGCTGCTGAAGCCAACGCAGGTGTCAAATCCGCTTTCAATGCTCTGAGATTGATTGTACTCGTT LITVPLLMIEFFIILKAVGAAVSTSSFWRLVIGTLVMLIGGYLGEAQIIGATPGFIIGMIGWAVIIWEIFGGEASKAAEANAGVKSAFNALRLIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCACTGTGCCGCTCTTAATGATCGAGTTCTTTATTATCCTCAAGGCA---------GTTGGTGCTGCAGTATCGACT---AGTTCC------------------------------------TTCTGGAGA---TTGGTCATCGGTACGCTGGTTATGCTGATTGGTGGGTACCTCGGTGAA---------GCC------------------CAA------ATT---------------------------------ATT------------------------------------------------------------------GGAGCA------------------ACTCCAGGA---TTCATTATCGGAATGATTGGATGGGCAGTGATTATATGGGAGATC---------------TTT------GGT---GGTGAGGCAAGTAAAGCTGCT------------GAA---GCCAACGCAGGTGTC---AAA---TCC---GCT---TTC---AAT---GCTCTG---AGATTGATTGTACTCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFFIILKA---VGAAVST-SS------------FWR-LVIGTLVMLIGGYLGE---A------Q--I-----------I----------------------GA------TPG-FIIGMIGWAVIIWEI-----F--G-GEASKAA----E-ANAGV-K-S-A-F-N-AL-RLIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-a]_KJ929564 [unk-env3-a] PRGD_OTU154_7e6d264df99c07777de300e73a49ce03 gb|KJ929564| PRGD_OTU154_7e6d264df99c07777de300e73a49ce03, putative proteorhodopsin gene, partial cds. PRGD_OTU154_7e6d264df99c07777de300e73a49ce03, putative proteorhodopsin gene, partial cds. KJ929564 [[root proteorhodopsin/env cluster 3/A subcluster]] root proteorhodopsin env cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTAATTACTGTTCCTCTACTAATGATTGAGTTTTATATAATATTGAAAGCTGTTGGCGCATCTGTATCAGCTAATTCATTTTGGAGGTTATTAATTGGTACTCTAGTTATGCTAATTGGTGGTTACCTTGGTGAAACTGGATTATATGGTGTTGGAGCTACTTTTGGTTTTATCATCGGTATGATTGGTTGGGCAGTAATTATCTGGGAAATCTTCAGAGGTGAGGCAAGTCAGGCTGCAGACGGAAAAGAAGGTATTAAATCAGCTTTCAACGCTCTAAGAATTATTGTTCTTGTT LITVPLLMIEFYIILKAVGASVSANSFWRLLIGTLVMLIGGYLGETGLYGVGATFGFIIGMIGWAVIIWEIFRGEASQAADGKEGIKSAFNALRIIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTACTGTTCCTCTACTAATGATTGAGTTTTATATAATATTGAAAGCT---------GTTGGCGCATCTGTATCAGCT---AATTCA------------------------------------TTTTGGAGG---TTATTAATTGGTACTCTAGTTATGCTAATTGGTGGTTACCTTGGTGAA---------ACT------------------GGA------TTATATGGT---------------------------GTT------------------------------------------------------------------GGAGCT------------------ACTTTTGGT---TTTATCATCGGTATGATTGGTTGGGCAGTAATTATCTGGGAAATC---------------TTC------AGA---GGTGAGGCAAGTCAGGCTGCA------------GAC---GGAAAAGAAGGTATT---AAA---TCA---GCT---TTC---AAC---GCTCTA---AGAATTATTGTTCTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYIILKA---VGASVSA-NS------------FWR-LLIGTLVMLIGGYLGE---T------G--LYG---------V----------------------GA------TFG-FIIGMIGWAVIIWEI-----F--R-GEASQAA----D-GKEGI-K-S-A-F-N-AL-RIIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-a]_KJ929565 [unk-env3-a] PRGD_OTU154_e8fabe29bbfeeecbea9606d9a494efd2 gb|KJ929565| PRGD_OTU154_e8fabe29bbfeeecbea9606d9a494efd2, putative proteorhodopsin gene, partial cds. PRGD_OTU154_e8fabe29bbfeeecbea9606d9a494efd2, putative proteorhodopsin gene, partial cds. KJ929565 [[root proteorhodopsin/env cluster 3/A subcluster]] root proteorhodopsin env cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATTACAGTCCCTCTATTGATGATTGAATTTTATATAATATTGAAGGCAGTTGGTGCCTCAGTATCAGCTAATTCATTTTGGAGATTATTAATTGGTACTCTAGTTATGCTAATTGGTGGTTACCTTGGAGAAACTGGATTATACGGTGTTGGAACTACCTTTGGTTTCATCATTGGTATGATTGGTTGGGCAGTTATTATTTGGGAAATCTTCAGAGGTGAAGCAAGTCAAGCTGCTGACGGAAAAGAAGGTATTAAGTCAGCTTTCAATGCTTTAAGAATTATTGTTCTTGTA LITVPLLMIEFYIILKAVGASVSANSFWRLLIGTLVMLIGGYLGETGLYGVGTTFGFIIGMIGWAVIIWEIFRGEASQAADGKEGIKSAFNALRIIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACAGTCCCTCTATTGATGATTGAATTTTATATAATATTGAAGGCA---------GTTGGTGCCTCAGTATCAGCT---AATTCA------------------------------------TTTTGGAGA---TTATTAATTGGTACTCTAGTTATGCTAATTGGTGGTTACCTTGGAGAA---------ACT------------------GGA------TTATACGGT---------------------------GTT------------------------------------------------------------------GGAACT------------------ACCTTTGGT---TTCATCATTGGTATGATTGGTTGGGCAGTTATTATTTGGGAAATC---------------TTC------AGA---GGTGAAGCAAGTCAAGCTGCT------------GAC---GGAAAAGAAGGTATT---AAG---TCA---GCT---TTC---AAT---GCTTTA---AGAATTATTGTTCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYIILKA---VGASVSA-NS------------FWR-LLIGTLVMLIGGYLGE---T------G--LYG---------V----------------------GT------TFG-FIIGMIGWAVIIWEI-----F--R-GEASQAA----D-GKEGI-K-S-A-F-N-AL-RIIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-a]_KJ929562 [unk-env3-a] PRGD_OTU154_otuREP_de6f44db730ba0e254955c65a3d3e966 gb|KJ929562| PRGD_OTU154_otuREP_de6f44db730ba0e254955c65a3d3e966, putative proteorhodopsin gene, partial cds. PRGD_OTU154_otuREP_de6f44db730ba0e254955c65a3d3e966, putative proteorhodopsin gene, partial cds. KJ929562 [[root proteorhodopsin/env cluster 3/A subcluster]] root proteorhodopsin env cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATTACTGTTCCTCTGTTGATGATTGAGTTCTACATTATATTAAAGGCAGTTGGTGCTTCAGTATCGGCTAATTCATTTTGGAGATTATTAATTGGTACCTTAGTTATGCTAATTGGTGGTTACCTTGGTGAAACTGGATTATATGGCGTTGGTGCTACTTTTGGTTTCATCATTGGTATGATCGGTTGGGCAGTTATTATTTGGGAGATCTTTAGAGGTGAAGCAAGTCAAGCTGCAGATGGAAAAGAAGGTATTAAATCAGCTTTTAACGCTTTAAGAATTATTGTTCTTGTA LITVPLLMIEFYIILKAVGASVSANSFWRLLIGTLVMLIGGYLGETGLYGVGATFGFIIGMIGWAVIIWEIFRGEASQAADGKEGIKSAFNALRIIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTTCCTCTGTTGATGATTGAGTTCTACATTATATTAAAGGCA---------GTTGGTGCTTCAGTATCGGCT---AATTCA------------------------------------TTTTGGAGA---TTATTAATTGGTACCTTAGTTATGCTAATTGGTGGTTACCTTGGTGAA---------ACT------------------GGA------TTATATGGC---------------------------GTT------------------------------------------------------------------GGTGCT------------------ACTTTTGGT---TTCATCATTGGTATGATCGGTTGGGCAGTTATTATTTGGGAGATC---------------TTT------AGA---GGTGAAGCAAGTCAAGCTGCA------------GAT---GGAAAAGAAGGTATT---AAA---TCA---GCT---TTT---AAC---GCTTTA---AGAATTATTGTTCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYIILKA---VGASVSA-NS------------FWR-LLIGTLVMLIGGYLGE---T------G--LYG---------V----------------------GA------TFG-FIIGMIGWAVIIWEI-----F--R-GEASQAA----D-GKEGI-K-S-A-F-N-AL-RIIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env3-a]_KJ929563 [unk-env3-a] PRGD_OTU154_2352ee991a877f87e76b9d31f5b38d2f gb|KJ929563| PRGD_OTU154_2352ee991a877f87e76b9d31f5b38d2f, putative proteorhodopsin gene, partial cds. PRGD_OTU154_2352ee991a877f87e76b9d31f5b38d2f, putative proteorhodopsin gene, partial cds. KJ929563 [[root proteorhodopsin/env cluster 3/A subcluster]] root proteorhodopsin env cluster 3 A subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTAATTACTGTTCCTCTATTGATGATTGAATTCTATATAATACTTAAAGCAGTTGGCGCTTCTGTGTCGGCTAATTCATTTTGGAGATTATTAATTGGTACATTAGTTATGCTAATTGGTGGTTACCTTGGTGAAACAGGATTATATGGTGTTGGAGCTACTTTTGGTTTCATCATTGGTATGATTGGTTGGGCAGTTATCATTTGGGAAATATTTAGAGGTGAGGCAAGTCAAGCAGCTGATGGAAAAGAAGGTATTAAGTCAGCTTTTAACGCTCTAAGAATTATTGTTCTTGTC LITVPLLMIEFYIILKAVGASVSANSFWRLLIGTLVMLIGGYLGETGLYGVGATFGFIIGMIGWAVIIWEIFRGEASQAADGKEGIKSAFNALRIIVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATTACTGTTCCTCTATTGATGATTGAATTCTATATAATACTTAAAGCA---------GTTGGCGCTTCTGTGTCGGCT---AATTCA------------------------------------TTTTGGAGA---TTATTAATTGGTACATTAGTTATGCTAATTGGTGGTTACCTTGGTGAA---------ACA------------------GGA------TTATATGGT---------------------------GTT------------------------------------------------------------------GGAGCT------------------ACTTTTGGT---TTCATCATTGGTATGATTGGTTGGGCAGTTATCATTTGGGAAATA---------------TTT------AGA---GGTGAGGCAAGTCAAGCAGCT------------GAT---GGAAAAGAAGGTATT---AAG---TCA---GCT---TTT---AAC---GCTCTA---AGAATTATTGTTCTTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYIILKA---VGASVSA-NS------------FWR-LLIGTLVMLIGGYLGE---T------G--LYG---------V----------------------GA------TFG-FIIGMIGWAVIIWEI-----F--R-GEASQAA----D-GKEGI-K-S-A-F-N-AL-RIIVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env2]_KJ929949 [unk-env2] PRGD_OTU380_7d9931771bacca5f320ccfa814c36929 gb|KJ929949| PRGD_OTU380_7d9931771bacca5f320ccfa814c36929, putative proteorhodopsin gene, partial cds. PRGD_OTU380_7d9931771bacca5f320ccfa814c36929, putative proteorhodopsin gene, partial cds. KJ929949 [[root proteorhodopsin/env cluster 2]] root proteorhodopsin env cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 71.501 19.8025 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097), English Channel (48.7717, -3.9683) CTTATTACTGTGCCGCTCCTTATGATAGAATTTTACCTCATCCTTTCGGCCGTCACGAAGGTGTCCGTTGGCATTTTCTGGCGACTACTCGTTGGCACAATCGTTATGTTAGTGGGCGGTTACCTTGGTGAAACAGGTTACATGAATCTCACCGCTGCCTTCATCATCGGAATGGCCGGCTGGGCCTATATCATCTATGAGATCTTTTTAGGTGAAGCGAGTAAAGTTAGTGCCAGTAAGGCACCTCCAGCAGTACAATCAGCATTTAAGACTATGCGTATAATTGTTACAGTT LITVPLLMIEFYLILSAVTKVSVGIFWRLLVGTIVMLVGGYLGETGYMNLTAAFIIGMAGWAYIIYEIFLGEASKVSASKAPPAVQSAFKTMRIIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATTACTGTGCCGCTCCTTATGATAGAATTTTACCTCATCCTTTCGGCC---------GTC---ACGAAGGTGTCCGTT---GGCATT------------------------------------TTCTGGCGA---CTACTCGTTGGCACAATCGTTATGTTAGTGGGCGGTTACCTTGGTGAA---------ACA------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATCTC------------------ACCGCTGCC---TTCATCATCGGAATGGCCGGCTGGGCCTATATCATCTATGAGATC---------------TTT------TTA---GGTGAAGCGAGTAAAGTTAGTGCCAGT------AAG---GCACCTCCAGCAGTA---CAA---TCA---GCA---TTT---AAG---ACTATG---CGTATAATTGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILSA---V-TKVSV-GI------------FWR-LLVGTIVMLVGGYLGE---T------G--Y-----------M----------------------NL------TAA-FIIGMAGWAYIIYEI-----F--L-GEASKVSAS--K-APPAV-Q-S-A-F-K-TM-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env2]_KJ929947 [unk-env2] PRGD_OTU380_otuREP_4b346a3594372d093d023865f088377b gb|KJ929947| PRGD_OTU380_otuREP_4b346a3594372d093d023865f088377b, putative proteorhodopsin gene, partial cds. PRGD_OTU380_otuREP_4b346a3594372d093d023865f088377b, putative proteorhodopsin gene, partial cds. KJ929947 [[root proteorhodopsin/env cluster 2]] root proteorhodopsin env cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Bering strait marine 67.49 -168.12 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) CTCATTACTGTGCCGCTCCTTATGATAGAATTTTACCTCATCCTTTCAGCCGTTACGAAGGTGTCCGTTGGTATTTTCTGGCGACTCCTCGTTGGCACAATCGTCATGTTAGTGGGCGGTTACCTTGGTGAAACAGGTTACATGAACCTCACCGCTGCCTTCGTCATCGGAATGGCCGGCTGGGCCTATATCATCTATGAGATCTTTTTAGGTGAAGCGAGTAAAGTTAGTGCCAGTAAAGCACCTCCAGCAGTACAATCAGCATTTAAGACTATGCGTATAATTGTTACAGTG LITVPLLMIEFYLILSAVTKVSVGIFWRLLVGTIVMLVGGYLGETGYMNLTAAFVIGMAGWAYIIYEIFLGEASKVSASKAPPAVQSAFKTMRIIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATTACTGTGCCGCTCCTTATGATAGAATTTTACCTCATCCTTTCAGCC---------GTT---ACGAAGGTGTCCGTT---GGTATT------------------------------------TTCTGGCGA---CTCCTCGTTGGCACAATCGTCATGTTAGTGGGCGGTTACCTTGGTGAA---------ACA------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AACCTC------------------ACCGCTGCC---TTCGTCATCGGAATGGCCGGCTGGGCCTATATCATCTATGAGATC---------------TTT------TTA---GGTGAAGCGAGTAAAGTTAGTGCCAGT------AAA---GCACCTCCAGCAGTA---CAA---TCA---GCA---TTT---AAG---ACTATG---CGTATAATTGTTACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILSA---V-TKVSV-GI------------FWR-LLVGTIVMLVGGYLGE---T------G--Y-----------M----------------------NL------TAA-FVIGMAGWAYIIYEI-----F--L-GEASKVSAS--K-APPAV-Q-S-A-F-K-TM-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env2]_KJ929948 [unk-env2] PRGD_OTU380_16b2017538309e699341b1220c4684f4 gb|KJ929948| PRGD_OTU380_16b2017538309e699341b1220c4684f4, putative proteorhodopsin gene, partial cds. PRGD_OTU380_16b2017538309e699341b1220c4684f4, putative proteorhodopsin gene, partial cds. KJ929948 [[root proteorhodopsin/env cluster 2]] root proteorhodopsin env cluster 2 proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Indian Ocean (-23.5956, 69.0419) CTTATTACTGTGCCGCTCCTTATGATAGAATTTTACCTCATCCTTTCAGCCGTTACGAAGGTGTCCGTTGGCATTTTCTGGCGACTACTCGTTGGCACAATCGTTATGTTAGTGGGCGGTTACCTTGGTGAAACAGGTTACATGAATCTCACCGCTGCCTTCGTCATCGGAATGGCCGGCTGGGCTTATATCCTCTATGAGATCTTTTTAGGTGAAGCGAGTAAAGTTAGTGCCAGTAAAGCACCTCCAGCAGTACAATCAGCATTTAAGACTATGCGTATAATTGTTACAGTT LITVPLLMIEFYLILSAVTKVSVGIFWRLLVGTIVMLVGGYLGETGYMNLTAAFVIGMAGWAYILYEIFLGEASKVSASKAPPAVQSAFKTMRIIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATTACTGTGCCGCTCCTTATGATAGAATTTTACCTCATCCTTTCAGCC---------GTT---ACGAAGGTGTCCGTT---GGCATT------------------------------------TTCTGGCGA---CTACTCGTTGGCACAATCGTTATGTTAGTGGGCGGTTACCTTGGTGAA---------ACA------------------GGT------TAC---------------------------------ATG------------------------------------------------------------------AATCTC------------------ACCGCTGCC---TTCGTCATCGGAATGGCCGGCTGGGCTTATATCCTCTATGAGATC---------------TTT------TTA---GGTGAAGCGAGTAAAGTTAGTGCCAGT------AAA---GCACCTCCAGCAGTA---CAA---TCA---GCA---TTT---AAG---ACTATG---CGTATAATTGTTACAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLLMIEFYLILSA---V-TKVSV-GI------------FWR-LLVGTIVMLVGGYLGE---T------G--Y-----------M----------------------NL------TAA-FVIGMAGWAYILYEI-----F--L-GEASKVSAS--K-APPAV-Q-S-A-F-K-TM-RIIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk]_KJ929854 [unk] PRGD_OTU305_otuREP_23bb19b3375db5c79e3e06e9e34faef2 gb|KJ929854| PRGD_OTU305_otuREP_23bb19b3375db5c79e3e06e9e34faef2, putative proteorhodopsin gene, partial cds. PRGD_OTU305_otuREP_23bb19b3375db5c79e3e06e9e34faef2, putative proteorhodopsin gene, partial cds. KJ929854 [[root proteorhodopsin]] root proteorhodopsin proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937; -23.5287, -117.8637) TCGATCACGGTCCCGCTGCAGATGATTGAGTTCTACTTGATCTTGAAGGCGGTGCAGCCGGTGTCCGGCGGCATGTTGGCTCGCTTGTTCTTCGGCACGGTCGCGATGTTGGCGTTCGGCTACATGGGCGAGGCCAAGTTCCTCAACCCGTACGTCGGCTTCGCGTGCGGCATGGCTGGCTGGGGCTTCATCCTCAACGAGATCTTCAACGGTGAGGCCGGCACCGCCGCCAAGTCGGTCGACAGCGTCAACAAGTACGTGCAGTCGTCGTTCGCGACCATGCGCTTCATCGTCACGGTC SITVPLQMIEFYLILKAVQPVSGGMLARLFFGTVAMLAFGYMGEAKFLNPYVGFACGMAGWGFILNEIFNGEAGTAAKSVDSVNKYVQSSFATMRFIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGATCACGGTCCCGCTGCAGATGATTGAGTTCTACTTGATCTTGAAGGCG---------GTG---CAGCCGGTGTCCGGC---GGCATG------------------------------------TTGGCTCGC---TTGTTCTTCGGCACGGTCGCGATGTTGGCGTTCGGCTACATGGGCGAG---------GCC------------------AAG------TTC---------------------------------CTC------------------------------------------------------------------AACCCG------------------TACGTCGGC---TTCGCGTGCGGCATGGCTGGCTGGGGCTTCATCCTCAACGAGATC---------------TTC------AAC---GGTGAGGCCGGCACCGCCGCCAAGTCGGTCGACAGC---GTCAACAAGTACGTG---CAG---TCG---TCG---TTC---GCG---ACCATG---CGCTTCATCGTCACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SITVPLQMIEFYLILKA---V-QPVSG-GM------------LAR-LFFGTVAMLAFGYMGE---A------K--F-----------L----------------------NP------YVG-FACGMAGWGFILNEI-----F--N-GEAGTAAKSVDS-VNKYV-Q-S-S-F-A-TM-RFIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk]_KJ929866 [unk] PRGD_OTU317_otuREP_f5fe89802afbc6d8bbadefa7ee8ff30b gb|KJ929866| PRGD_OTU317_otuREP_f5fe89802afbc6d8bbadefa7ee8ff30b, putative proteorhodopsin gene, partial cds. PRGD_OTU317_otuREP_f5fe89802afbc6d8bbadefa7ee8ff30b, putative proteorhodopsin gene, partial cds. KJ929866 [[root proteorhodopsin]] root proteorhodopsin proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TCGATCACCGTTCCCCTGCAGATGATCGAGTTCAACCTCATCCTCAAGGCGGTGCAGCCGAGCATCTCGTCCGGCATGTTCTGGCGCCTGATGCTCGGCACGCTTGTGATGCTCGCGTGCGGCTACGCGGGGGAGTCCCACCTCCTGAACCCGTGGATCGGCTTCGTCTGCGGGTTGGCCGGCTGGGCCTTCATCTTGTTCGAGATCTTCGCCGGCGAGGCGGGCTCCGTGGCTAGCCAGGCTGACAAGGTGAACCAGTACGTGCAGGCCTCCTTCGGCACCATGCGTCTCATCGTCACGGTC SITVPLQMIEFNLILKAVQPSISSGMFWRLMLGTLVMLACGYAGESHLLNPWIGFVCGLAGWAFILFEIFAGEAGSVASQADKVNQYVQASFGTMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGATCACCGTTCCCCTGCAGATGATCGAGTTCAACCTCATCCTCAAGGCG---------GTGCAGCCGAGCATCTCGTCC---GGCATG------------------------------------TTCTGGCGC---CTGATGCTCGGCACGCTTGTGATGCTCGCGTGCGGCTACGCGGGGGAG---------TCC------------------CAC------CTC---------------------------------CTG------------------------------------------------------------------AACCCG------------------TGGATCGGC---TTCGTCTGCGGGTTGGCCGGCTGGGCCTTCATCTTGTTCGAGATC---------------TTC------GCC---GGCGAGGCGGGCTCCGTGGCTAGCCAGGCTGACAAG---GTGAACCAGTACGTG---CAG---GCC---TCC---TTC---GGC---ACCATG---CGTCTCATCGTCACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SITVPLQMIEFNLILKA---VQPSISS-GM------------FWR-LMLGTLVMLACGYAGE---S------H--L-----------L----------------------NP------WIG-FVCGLAGWAFILFEI-----F--A-GEAGSVASQADK-VNQYV-Q-A-S-F-G-TM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk]_KJ929825 [unk] PRGD_OTU276_otuREP_2cf8aa323c72ddc7fa9cb853c2486276 gb|KJ929825| PRGD_OTU276_otuREP_2cf8aa323c72ddc7fa9cb853c2486276, putative proteorhodopsin gene, partial cds. PRGD_OTU276_otuREP_2cf8aa323c72ddc7fa9cb853c2486276, putative proteorhodopsin gene, partial cds. KJ929825 [[root proteorhodopsin]] root proteorhodopsin proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TCGATCACAGTCCCCCTGCAGATGATTGAGTTCTTCTTGATCCTCAAGGCAGTGCAGCCCGGCACCAGCAGCGGCATGTTCTTTCGCCTGTTCCTCGGCACCGTGTGGATGCTTGCGTCCGGCTACGCGGGCGAGGCGCACTTCGTGCCGGCCTGGCCGGGCTTCATCTCGGGCCTGGCTGGCTGGGGCGTCATCCTCTTCGAAATCTTCGCGGGGGAGGCGGGGCAAGACGCCTCGAAAGCGAACAAGGCCGTGGCGGAAGCCTTCACCATCATGCGCCTCATCGTCACTGTG SITVPLQMIEFFLILKAVQPGTSSGMFFRLFLGTVWMLASGYAGEAHFVPAWPGFISGLAGWGVILFEIFAGEAGQDASKANKAVAEAFTIMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGATCACAGTCCCCCTGCAGATGATTGAGTTCTTCTTGATCCTCAAGGCA---------GTGCAGCCCGGCACCAGCAGC---GGCATG------------------------------------TTCTTTCGC---CTGTTCCTCGGCACCGTGTGGATGCTTGCGTCCGGCTACGCGGGCGAG---------GCG------------------CAC------TTC---------------------------------GTG------------------------------------------------------------------CCGGCC------------------TGGCCGGGC---TTCATCTCGGGCCTGGCTGGCTGGGGCGTCATCCTCTTCGAAATC---------------TTC------GCG---GGGGAGGCGGGGCAAGACGCCTCGAAAGCG------------AACAAGGCCGTG---GCG---GAA---GCC---TTC---ACC---ATCATG---CGCCTCATCGTCACTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SITVPLQMIEFFLILKA---VQPGTSS-GM------------FFR-LFLGTVWMLASGYAGE---A------H--F-----------V----------------------PA------WPG-FISGLAGWGVILFEI-----F--A-GEAGQDASKA----NKAV-A-E-A-F-T-IM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk]_KJ929642 [unk] PRGD_OTU179_2bd070d8ca947759691fb4709d44f368 gb|KJ929642| PRGD_OTU179_2bd070d8ca947759691fb4709d44f368, putative proteorhodopsin gene, partial cds. PRGD_OTU179_2bd070d8ca947759691fb4709d44f368, putative proteorhodopsin gene, partial cds. KJ929642 [[root proteorhodopsin]] root proteorhodopsin proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) TCGATCACCGTGCCGCTGCAGATGATCGAGTTCAACCTGATCCTCAAGGCGGTGAAGCCGGACATCAGCGCGGGGATGTTCTGGCGGCTTCTGGTTGGCACCGTGATGATGCTGACGTTCGGCTACTGCGGCGAGTCCTCGATCATCGGGGCCTGGGTGGGCTTCGTCCTCGGCCTGTGCGGCTGGTTCTTCATCCTGGCCGAGATCTTCGTGGGCGAGGCCGGCCAGGTGTCCGCCAGCCAGAATGCGCACGTGCAGGCCTCCTTCAACACCATGCGCTTCATCGTCACCATC SITVPLQMIEFNLILKAVKPDISAGMFWRLLVGTVMMLTFGYCGESSIIGAWVGFVLGLCGWFFILAEIFVGEAGQVSASQNAHVQASFNTMRFIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGATCACCGTGCCGCTGCAGATGATCGAGTTCAACCTGATCCTCAAGGCG---------GTGAAGCCGGACATCAGCGCG---GGGATG------------------------------------TTCTGGCGG---CTTCTGGTTGGCACCGTGATGATGCTGACGTTCGGCTACTGCGGCGAG---------TCC------------------TCG------ATC---------------------------------ATC------------------------------------------------------------------GGGGCC------------------TGGGTGGGC---TTCGTCCTCGGCCTGTGCGGCTGGTTCTTCATCCTGGCCGAGATC---------------TTC------GTG---GGCGAGGCCGGCCAGGTGTCCGCCAGCCAG------------AATGCGCACGTG---CAG---GCC---TCC---TTC---AAC---ACCATG---CGCTTCATCGTCACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SITVPLQMIEFNLILKA---VKPDISA-GM------------FWR-LLVGTVMMLTFGYCGE---S------S--I-----------I----------------------GA------WVG-FVLGLCGWFFILAEI-----F--V-GEAGQVSASQ----NAHV-Q-A-S-F-N-TM-RFIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk]_KJ929641 [unk] PRGD_OTU179_otuREP_2cfde2f8430e0880200cfba5647da3df gb|KJ929641| PRGD_OTU179_otuREP_2cfde2f8430e0880200cfba5647da3df, putative proteorhodopsin gene, partial cds. PRGD_OTU179_otuREP_2cfde2f8430e0880200cfba5647da3df, putative proteorhodopsin gene, partial cds. KJ929641 [[root proteorhodopsin]] root proteorhodopsin proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419) TCGATCACCGTTCCGCTGCAGATGATCGAGTTCAACCTGATCCTCAAGGCGGTGAAGCCCGACATCAGCGCGGGGATGTTCTGGCGGCTGTTGGTTGGCACCGTGATGATGCTGACGTTCGGCTACTGCGGCGAGTCCTCGATCATCGGGGCCTGGGTGGGCTTCGTCCTCGGCCTGTGCGGGTGGTTCTTCATCCTGGCCGAGATCTTCGTGGGCGAGGCCGGCCAGGTGTCCGCTAGCACGAACCCGCACGTGCAGGCCTCCTTCAACACCATGCGCTTCATCGTCACCATC SITVPLQMIEFNLILKAVKPDISAGMFWRLLVGTVMMLTFGYCGESSIIGAWVGFVLGLCGWFFILAEIFVGEAGQVSASTNPHVQASFNTMRFIVTI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGATCACCGTTCCGCTGCAGATGATCGAGTTCAACCTGATCCTCAAGGCG---------GTGAAGCCCGACATCAGCGCG---GGGATG------------------------------------TTCTGGCGG---CTGTTGGTTGGCACCGTGATGATGCTGACGTTCGGCTACTGCGGCGAG---------TCC------------------TCG------ATC---------------------------------ATC------------------------------------------------------------------GGGGCC------------------TGGGTGGGC---TTCGTCCTCGGCCTGTGCGGGTGGTTCTTCATCCTGGCCGAGATC---------------TTC------GTG---GGCGAGGCCGGCCAGGTGTCCGCT---------AGC---ACGAACCCGCACGTG---CAG---GCC---TCC---TTC---AAC---ACCATG---CGCTTCATCGTCACCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SITVPLQMIEFNLILKA---VKPDISA-GM------------FWR-LLVGTVMMLTFGYCGE---S------S--I-----------I----------------------GA------WVG-FVLGLCGWFFILAEI-----F--V-GEAGQVSA---S-TNPHV-Q-A-S-F-N-TM-RFIVTI-------------------------------------------------------------------------------------------------------------------------------- [unk]_KJ929643 [unk] PRGD_OTU179_b014ae2e3cf1dd3e274db5fad511b377 gb|KJ929643| PRGD_OTU179_b014ae2e3cf1dd3e274db5fad511b377, putative proteorhodopsin gene, partial cds. PRGD_OTU179_b014ae2e3cf1dd3e274db5fad511b377, putative proteorhodopsin gene, partial cds. KJ929643 [[root proteorhodopsin]] root proteorhodopsin proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 27-oct-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TCGATCACCGTCCCGCTGCAGATGATCGAGTTCAACTTGATCCTGAAGGCGGTGAAGCCCGACATCAGCGCGGGGATGTTCTGGCGGCTGCTGGCTGGCACCGTGATGATGCTGACCTTCGGCTACTGCGGCGAGTCCTCGATCATCGGGGCCTGGGTGGGCTTCGTCCTCGGCCTGTGCGGCTGGTTCTTCGTCTTGGCCGAGATCTTCGTGGGCGAGGCTGGTCAGGTGTCTGCCGGCACCAACCAGCATGTGCAGGCCTCCTTCAACACCATGCGCTTCATCGTCACGGTC SITVPLQMIEFNLILKAVKPDISAGMFWRLLAGTVMMLTFGYCGESSIIGAWVGFVLGLCGWFFVLAEIFVGEAGQVSAGTNQHVQASFNTMRFIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGATCACCGTCCCGCTGCAGATGATCGAGTTCAACTTGATCCTGAAGGCG---------GTGAAGCCCGACATCAGCGCG---GGGATG------------------------------------TTCTGGCGG---CTGCTGGCTGGCACCGTGATGATGCTGACCTTCGGCTACTGCGGCGAG---------TCC------------------TCG------ATC---------------------------------ATC------------------------------------------------------------------GGGGCC------------------TGGGTGGGC---TTCGTCCTCGGCCTGTGCGGCTGGTTCTTCGTCTTGGCCGAGATC---------------TTC------GTG---GGCGAGGCTGGTCAGGTGTCTGCC---------GGC---ACCAACCAGCATGTG---CAG---GCC---TCC---TTC---AAC---ACCATG---CGCTTCATCGTCACGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SITVPLQMIEFNLILKA---VKPDISA-GM------------FWR-LLAGTVMMLTFGYCGE---S------S--I-----------I----------------------GA------WVG-FVLGLCGWFFVLAEI-----F--V-GEAGQVSA---G-TNQHV-Q-A-S-F-N-TM-RFIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk]_KJ929608 [unk] PRGD_OTU168_otuREP_318294f3e55f08aad43cc2a430f0812a gb|KJ929608| PRGD_OTU168_otuREP_318294f3e55f08aad43cc2a430f0812a, putative proteorhodopsin gene, partial cds. PRGD_OTU168_otuREP_318294f3e55f08aad43cc2a430f0812a, putative proteorhodopsin gene, partial cds. KJ929608 [[root proteorhodopsin]] root proteorhodopsin proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in North Pacific Ocean (50.06, -139.53), Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683) TCAATTACCGTCCCTCTGCAGATGATTGAGTTCTATTTGATCCTCCTTGCGGTAAAGCCTAACCTCACAGGTGGCATGTTCTGGCGCTTGTTGCTTGGCACAGTTGCGATGTTGGCCTTCGGCTATGCCGGCGAGGCTAAGGCTGTCGATCCCACCGTGGGCTTCGTGCTCGGTATGGCCGGATGGTTTTACATTCTTTATGAAATCTTCATGGGCGAAGCTGGTGCCATTGCCACCAGGGGTGATAGCGTGAACAAGCACGTGCAAGCCTCCTTCAAGACCATGCGCTTCATCGTGACAGTG SITVPLQMIEFYLILLAVKPNLTGGMFWRLLLGTVAMLAFGYAGEAKAVDPTVGFVLGMAGWFYILYEIFMGEAGAIATRGDSVNKHVQASFKTMRFIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAATTACCGTCCCTCTGCAGATGATTGAGTTCTATTTGATCCTCCTTGCG---------GTAAAGCCTAACCTCACAGGT---GGCATG------------------------------------TTCTGGCGC---TTGTTGCTTGGCACAGTTGCGATGTTGGCCTTCGGCTATGCCGGCGAG---------GCT------------------AAG------GCT---------------------------------GTC------------------------------------------------------------------GATCCC------------------ACCGTGGGC---TTCGTGCTCGGTATGGCCGGATGGTTTTACATTCTTTATGAAATC---------------TTC------ATG---GGCGAAGCTGGTGCCATTGCCACCAGGGGTGATAGC---GTGAACAAGCACGTG---CAA---GCC---TCC---TTC---AAG---ACCATG---CGCTTCATCGTGACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SITVPLQMIEFYLILLA---VKPNLTG-GM------------FWR-LLLGTVAMLAFGYAGE---A------K--A-----------V----------------------DP------TVG-FVLGMAGWFYILYEI-----F--M-GEAGAIATRGDS-VNKHV-Q-A-S-F-K-TM-RFIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk]_KJ929610 [unk] PRGD_OTU168_6e201efeb3ca380fe225d09137d1fdbb gb|KJ929610| PRGD_OTU168_6e201efeb3ca380fe225d09137d1fdbb, putative proteorhodopsin gene, partial cds. PRGD_OTU168_6e201efeb3ca380fe225d09137d1fdbb, putative proteorhodopsin gene, partial cds. KJ929610 [[root proteorhodopsin]] root proteorhodopsin proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TCAATTACCGTCCCTCTGCAGATGATTGAGTTCTATTTGATCCTCCTTGCGGTAAAGCCTAACCTCACAGGTGGCATGTTCTGGCGCTTGTTGCTTGGCACAGTTGCGATGTTGGCCTTCGGCTATGCCGGCGAGGCTAAGGCTGTCGATCCCACCGTGGGCTTCGTGCTTGGTATGGCCGGATGGTTTTACATTCTTTATGAAATCTTCATGGGCGAAGCTGGTTCCATTGCCACCAGGGGTGATAGCGTGAACAAGCACGTGCAAGCCTCCTTCAAGACCATGCGCTTCATCGTGACAGTG SITVPLQMIEFYLILLAVKPNLTGGMFWRLLLGTVAMLAFGYAGEAKAVDPTVGFVLGMAGWFYILYEIFMGEAGSIATRGDSVNKHVQASFKTMRFIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAATTACCGTCCCTCTGCAGATGATTGAGTTCTATTTGATCCTCCTTGCG---------GTAAAGCCTAACCTCACAGGT---GGCATG------------------------------------TTCTGGCGC---TTGTTGCTTGGCACAGTTGCGATGTTGGCCTTCGGCTATGCCGGCGAG---------GCT------------------AAG------GCT---------------------------------GTC------------------------------------------------------------------GATCCC------------------ACCGTGGGC---TTCGTGCTTGGTATGGCCGGATGGTTTTACATTCTTTATGAAATC---------------TTC------ATG---GGCGAAGCTGGTTCCATTGCCACCAGGGGTGATAGC---GTGAACAAGCACGTG---CAA---GCC---TCC---TTC---AAG---ACCATG---CGCTTCATCGTGACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SITVPLQMIEFYLILLA---VKPNLTG-GM------------FWR-LLLGTVAMLAFGYAGE---A------K--A-----------V----------------------DP------TVG-FVLGMAGWFYILYEI-----F--M-GEAGSIATRGDS-VNKHV-Q-A-S-F-K-TM-RFIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk]_KJ929609 [unk] PRGD_OTU168_665bf1fa4e1253970e1cc51ec18c3053 gb|KJ929609| PRGD_OTU168_665bf1fa4e1253970e1cc51ec18c3053, putative proteorhodopsin gene, partial cds. PRGD_OTU168_665bf1fa4e1253970e1cc51ec18c3053, putative proteorhodopsin gene, partial cds. KJ929609 [[root proteorhodopsin]] root proteorhodopsin proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 72.0542 -130.8781 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TCAATTACCGTCCCTCTGCAGATGATTGAGTTCTATTTGATCCTCCTTGCGGTAAAGCCTAATCTCACAGGTGGCATGTTCTGGCGCTTGTTGCTTGGCACAGTTGCGATGTTGGCCTTCGGCTATGCCGGCGAGGCTAAGGCTGTCAATCCCACCGTGGGCTTTGTGCTCGGTATGGCCGGATGGTTTTACATTCTTTATGAAATCTTCATGGGCGAAGCTGGTGCCATTGCCACCAGGGGTGATAACGTGAACAAGCACGTGCAAGCCTCCTTCAAGACCATGCGCTTCATCGTGACAGTG SITVPLQMIEFYLILLAVKPNLTGGMFWRLLLGTVAMLAFGYAGEAKAVNPTVGFVLGMAGWFYILYEIFMGEAGAIATRGDNVNKHVQASFKTMRFIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAATTACCGTCCCTCTGCAGATGATTGAGTTCTATTTGATCCTCCTTGCG---------GTAAAGCCTAATCTCACAGGT---GGCATG------------------------------------TTCTGGCGC---TTGTTGCTTGGCACAGTTGCGATGTTGGCCTTCGGCTATGCCGGCGAG---------GCT------------------AAG------GCT---------------------------------GTC------------------------------------------------------------------AATCCC------------------ACCGTGGGC---TTTGTGCTCGGTATGGCCGGATGGTTTTACATTCTTTATGAAATC---------------TTC------ATG---GGCGAAGCTGGTGCCATTGCCACCAGGGGTGATAAC---GTGAACAAGCACGTG---CAA---GCC---TCC---TTC---AAG---ACCATG---CGCTTCATCGTGACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SITVPLQMIEFYLILLA---VKPNLTG-GM------------FWR-LLLGTVAMLAFGYAGE---A------K--A-----------V----------------------NP------TVG-FVLGMAGWFYILYEI-----F--M-GEAGAIATRGDN-VNKHV-Q-A-S-F-K-TM-RFIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk]_KJ929840 [unk] PRGD_OTU291_otuREP_2d33c511618206563aec0d050cb11515 gb|KJ929840| PRGD_OTU291_otuREP_2d33c511618206563aec0d050cb11515, putative proteorhodopsin gene, partial cds. PRGD_OTU291_otuREP_2d33c511618206563aec0d050cb11515, putative proteorhodopsin gene, partial cds. KJ929840 [[root proteorhodopsin]] root proteorhodopsin proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Indian Ocean (-23.5956, 69.0419) AGCATCACTGTCCCATTGCAGATGATTGAATTCAACCTGATCCTGAAGGCGGCCGGCAAGCCAACCAGCAGCGCTATGTTTTGGAAGCTCTTGCTCGGCACCGTTGTGATGCTCCTATTCGGATACCTTGGTGAGATCGCCGTTGTTCCCAAGCTGATTGGCTTCATTATCGGAATGTGCGGATGGTTTTTCATTCTGTTTGAGATCTTCGCTGGCGAGGCCGGTGGCACTGCGAAAGATTGCAGCGAGGCTGTGAGCAGCGCCTTCTCAAACATGCGTTTGATCGTTACTGTC SITVPLQMIEFNLILKAAGKPTSSAMFWKLLLGTVVMLLFGYLGEIAVVPKLIGFIIGMCGWFFILFEIFAGEAGGTAKDCSEAVSSAFSNMRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCATCACTGTCCCATTGCAGATGATTGAATTCAACCTGATCCTGAAGGCG---------GCCGGCAAGCCAACCAGCAGC---GCTATG------------------------------------TTTTGGAAG---CTCTTGCTCGGCACCGTTGTGATGCTCCTATTCGGATACCTTGGTGAG---------ATC------------------GCC------GTT---------------------------------GTT------------------------------------------------------------------CCCAAG------------------CTGATTGGC---TTCATTATCGGAATGTGCGGATGGTTTTTCATTCTGTTTGAGATC---------------TTC------GCT---GGCGAGGCCGGTGGCACTGCGAAAGAT------------TGCAGCGAGGCTGTG---AGC---AGC---GCC---TTC---TCA---AACATG---CGTTTGATCGTTACTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SITVPLQMIEFNLILKA---AGKPTSS-AM------------FWK-LLLGTVVMLLFGYLGE---I------A--V-----------V----------------------PK------LIG-FIIGMCGWFFILFEI-----F--A-GEAGGTAKD----CSEAV-S-S-A-F-S-NM-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk]_KJ929666 [unk] PRGD_OTU187_3065f7a0356a9a531bac4ccbd7e5b199 gb|KJ929666| PRGD_OTU187_3065f7a0356a9a531bac4ccbd7e5b199, putative proteorhodopsin gene, partial cds. PRGD_OTU187_3065f7a0356a9a531bac4ccbd7e5b199, putative proteorhodopsin gene, partial cds. KJ929666 [[root proteorhodopsin]] root proteorhodopsin proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATCACCGTCCCGCTGCAAATGATCGAGTTCTACCTCATCCTCGCAGCGATCACGAAGGTGTCGTCGGGCATCTTCTGGCGCCTCCTGCTGGGCACGCTCGTGATGCTCGTTGGCGGCTACATCGGTGAGTCGGGCGCCGGCGACAAGACGGTGTTCTTTGCCATCGGCATGGCCGGCTGGCTGTTCATCCTTTACGAGATCTTCGCCGGCGAGGCGAGCAAGGTCTGCGCGGCTTCCGCCCCGGCGGGCGTCCAGAAGGCCTACGGCGTTCTGCGCATCATCGTGTCGCTC LITVPLQMIEFYLILAAITKVSSGIFWRLLLGTLVMLVGGYIGESGAGDKTVFFAIGMAGWLFILYEIFAGEASKVCAASAPAGVQKAYGVLRIIVSL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTCCCGCTGCAAATGATCGAGTTCTACCTCATCCTCGCAGCG---------ATC---ACGAAGGTGTCGTCG---GGCATC------------------------------------TTCTGGCGC---CTCCTGCTGGGCACGCTCGTGATGCTCGTTGGCGGCTACATCGGTGAG---------TCG------------------GGC------GCC---------------------------------------------------------------------------------------------------GGCGACAAG------------------ACGGTGTTC---TTTGCCATCGGCATGGCCGGCTGGCTGTTCATCCTTTACGAGATC---------------TTC------GCC---GGCGAGGCGAGCAAGGTCTGCGCGGCT------TCC---GCCCCGGCGGGCGTC---CAG---AAG---GCC---TAC---GGC---GTTCTG---CGCATCATCGTGTCGCTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---I-TKVSS-GI------------FWR-LLLGTLVMLVGGYIGE---S------G--A---------------------------------GDK------TVF-FAIGMAGWLFILYEI-----F--A-GEASKVCAA--S-APAGV-Q-K-A-Y-G-VL-RIIVSL-------------------------------------------------------------------------------------------------------------------------------- [unk]_KJ929665 [unk] PRGD_OTU187_otuREP_a410350bb1b653b3fa1f6bff1f2691a6 gb|KJ929665| PRGD_OTU187_otuREP_a410350bb1b653b3fa1f6bff1f2691a6, putative proteorhodopsin gene, partial cds. PRGD_OTU187_otuREP_a410350bb1b653b3fa1f6bff1f2691a6, putative proteorhodopsin gene, partial cds. KJ929665 [[root proteorhodopsin]] root proteorhodopsin proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683) CTGATCACCGTCCCGCTGCAGATGATCGAGTTCTACCTCATCCTCGCAGCGATCACGAAGGTGTCGTCGGGCATCTTCTGGCGCCTGATGCTGGGCACCCTCGTCATGCTGCTCGGCGGCTACATCGGCGAGTCGGGCCTCGGCAACAACACGGTGTTCTTCGCCATCGGCATGGCCGGCTGGTTGTTCATCCTCTACGAGATCTTCGCCGGTGAGGCGAGCAAGGTCTGCGCGGCTTCCGCTCCGGCGGGCGTCCAGAAGGCCTACGGCGTTCTGCGCATCATCGTGTCGCTC LITVPLQMIEFYLILAAITKVSSGIFWRLMLGTLVMLLGGYIGESGLGNNTVFFAIGMAGWLFILYEIFAGEASKVCAASAPAGVQKAYGVLRIIVSL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACCGTCCCGCTGCAGATGATCGAGTTCTACCTCATCCTCGCAGCG---------ATC---ACGAAGGTGTCGTCG---GGCATC------------------------------------TTCTGGCGC---CTGATGCTGGGCACCCTCGTCATGCTGCTCGGCGGCTACATCGGCGAG---------TCG------------------GGC------CTC---------------------------------------------------------------------------------------------------GGCAACAAC------------------ACGGTGTTC---TTCGCCATCGGCATGGCCGGCTGGTTGTTCATCCTCTACGAGATC---------------TTC------GCC---GGTGAGGCGAGCAAGGTCTGCGCGGCT------TCC---GCTCCGGCGGGCGTC---CAG---AAG---GCC---TAC---GGC---GTTCTG---CGCATCATCGTGTCGCTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---I-TKVSS-GI------------FWR-LMLGTLVMLLGGYIGE---S------G--L---------------------------------GNN------TVF-FAIGMAGWLFILYEI-----F--A-GEASKVCAA--S-APAGV-Q-K-A-Y-G-VL-RIIVSL-------------------------------------------------------------------------------------------------------------------------------- [unk]_KJ929667 [unk] PRGD_OTU187_50eb7bcaf7f5ae238265aab2abb67e64 gb|KJ929667| PRGD_OTU187_50eb7bcaf7f5ae238265aab2abb67e64, putative proteorhodopsin gene, partial cds. PRGD_OTU187_50eb7bcaf7f5ae238265aab2abb67e64, putative proteorhodopsin gene, partial cds. KJ929667 [[root proteorhodopsin]] root proteorhodopsin proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na CTGATCACGGTGCCGCTGCAGATGATCGAGTTCTACCTCATCCTCGCAGCCATCACGAAGGTGTCCTCCGGCATCTTCTGGCGCCTCATGTTGGGCACCCTCATCATGCTGCTCGGCGGCTACATCGGCGAGTCGGGGCTCGGCAACGAGACCGTGTTCTTCGCCATCGGCTTTGCCGGCTGGTTGTTCATCCTCTACGAGATCTTCGCCGGAGAGGCGAGCAAGGTCTGCGCCGCCTCCGCATCGGCGGGCGTCCAGAAGGCCTACGGCGTCCTGCGCATCATCGTGTCACTC LITVPLQMIEFYLILAAITKVSSGIFWRLMLGTLIMLLGGYIGESGLGNETVFFAIGFAGWLFILYEIFAGEASKVCAASASAGVQKAYGVLRIIVSL ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATCACGGTGCCGCTGCAGATGATCGAGTTCTACCTCATCCTCGCAGCC---------ATC---ACGAAGGTGTCCTCC---GGCATC------------------------------------TTCTGGCGC---CTCATGTTGGGCACCCTCATCATGCTGCTCGGCGGCTACATCGGCGAG---------TCG------------------GGG------CTC---------------------------------------------------------------------------------------------------GGCAACGAG------------------ACCGTGTTC---TTCGCCATCGGCTTTGCCGGCTGGTTGTTCATCCTCTACGAGATC---------------TTC------GCC---GGAGAGGCGAGCAAGGTCTGCGCCGCC------TCC---GCATCGGCGGGCGTC---CAG---AAG---GCC---TAC---GGC---GTCCTG---CGCATCATCGTGTCACTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVPLQMIEFYLILAA---I-TKVSS-GI------------FWR-LMLGTLIMLLGGYIGE---S------G--L---------------------------------GNE------TVF-FAIGFAGWLFILYEI-----F--A-GEASKVCAA--S-ASAGV-Q-K-A-Y-G-VL-RIIVSL-------------------------------------------------------------------------------------------------------------------------------- [unk]_KJ929632 [unk] PRGD_OTU176_otuREP_b503107d2a02a2b1442310e9dde74ea0 gb|KJ929632| PRGD_OTU176_otuREP_b503107d2a02a2b1442310e9dde74ea0, putative proteorhodopsin gene, partial cds. PRGD_OTU176_otuREP_b503107d2a02a2b1442310e9dde74ea0, putative proteorhodopsin gene, partial cds. KJ929632 [[root proteorhodopsin]] root proteorhodopsin proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGCTGACCGTGCCACTTCAAATCGTGGAGTTCTACCTCATCCTGGCAGCCGTGACCACGGTGGCTGTGGGCTTGTTTTGGCGCCTACTCGGTGCATCCGTCCTCATGCTGGTCGCTGGATATCTTGGCGAGGTCAATGCGACCGATTCTGGAATGCTGTGGGGCCTGTTTGCCGTCGGGTTCGCCGCATGGTTGTACATCGTCTATGAAATCTTCGCCGGCGAAGCCAGTAAACTGAACGCTGCGAGCGGGTCCGCGGCTTCCCAGCGTGCTTTCCAGGCCCTACGTGTCATCGTCACGTTC LLTVPLQIVEFYLILAAVTTVAVGLFWRLLGASVLMLVAGYLGEVNATDSGMLWGLFAVGFAAWLYIVYEIFAGEASKLNAASGSAASQRAFQALRVIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTGACCGTGCCACTTCAAATCGTGGAGTTCTACCTCATCCTGGCAGCC---------GTG---ACCACGGTGGCTGTG---GGCTTG------------------------------------TTTTGGCGC---CTACTCGGTGCATCCGTCCTCATGCTGGTCGCTGGATATCTTGGCGAG---------GTC------------------AAT------GCG---------------------------------ACC------------------------------------------------------------------GATTCT---------GGAATGCTGTGGGGCCTG---TTTGCCGTCGGGTTCGCCGCATGGTTGTACATCGTCTATGAAATC---------------TTC------GCC---GGCGAAGCCAGTAAACTGAACGCTGCG------AGC---GGGTCCGCGGCTTCC---CAG---CGT---GCT---TTC---CAG---GCCCTA---CGTGTCATCGTCACGTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---V-TTVAV-GL------------FWR-LLGASVLMLVAGYLGE---V------N--A-----------T----------------------DS---GMLWGL-FAVGFAAWLYIVYEI-----F--A-GEASKLNAA--S-GSAAS-Q-R-A-F-Q-AL-RVIVTF-------------------------------------------------------------------------------------------------------------------------------- [unk]_KJ929634 [unk] PRGD_OTU176_d8bc25979c041c0901335452206024c4 gb|KJ929634| PRGD_OTU176_d8bc25979c041c0901335452206024c4, putative proteorhodopsin gene, partial cds. PRGD_OTU176_d8bc25979c041c0901335452206024c4, putative proteorhodopsin gene, partial cds. KJ929634 [[root proteorhodopsin]] root proteorhodopsin proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na TTGCTGACCGTGCCACTTCAAATCGTGGAGTTCTACCTCATCCTGGCAGCCGTGACCACGGTGGCTGTGGGCTTGTTTTGGCGCCTACTCGGTGCATCAGTCCTCATGCTGGTCGCTGGATATCTTGGCGAGGTCAATGCGACCGATTCTGGAATGCTGTGGGGCCTGTTTGCCGTCGGGTTCGCCGCATGGTTGTACATCGTCTATGAAATCTTTGCCGGCGAAGCCAGTAAACTGAACGCTGCGAGCGGGTCCGCGGCTTCCCAGCGTGCTTTCCAGGCCCTACGTGTCATCGTCACGTTC LLTVPLQIVEFYLILAAVTTVAVGLFWRLLGASVLMLVAGYLGEVNATDSGMLWGLFAVGFAAWLYIVYEIFAGEASKLNAASGSAASQRAFQALRVIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTGACCGTGCCACTTCAAATCGTGGAGTTCTACCTCATCCTGGCAGCC---------GTG---ACCACGGTGGCTGTG---GGCTTG------------------------------------TTTTGGCGC---CTACTCGGTGCATCAGTCCTCATGCTGGTCGCTGGATATCTTGGCGAG---------GTC------------------AAT------GCG---------------------------------ACC------------------------------------------------------------------GATTCT---------GGAATGCTGTGGGGCCTG---TTTGCCGTCGGGTTCGCCGCATGGTTGTACATCGTCTATGAAATC---------------TTT------GCC---GGCGAAGCCAGTAAACTGAACGCTGCG------AGC---GGGTCCGCGGCTTCC---CAG---CGT---GCT---TTC---CAG---GCCCTA---CGTGTCATCGTCACGTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---V-TTVAV-GL------------FWR-LLGASVLMLVAGYLGE---V------N--A-----------T----------------------DS---GMLWGL-FAVGFAAWLYIVYEI-----F--A-GEASKLNAA--S-GSAAS-Q-R-A-F-Q-AL-RVIVTF-------------------------------------------------------------------------------------------------------------------------------- [unk]_KJ929633 [unk] PRGD_OTU176_80a1a18e9e52df900203280b00d84737 gb|KJ929633| PRGD_OTU176_80a1a18e9e52df900203280b00d84737, putative proteorhodopsin gene, partial cds. PRGD_OTU176_80a1a18e9e52df900203280b00d84737, putative proteorhodopsin gene, partial cds. KJ929633 [[root proteorhodopsin]] root proteorhodopsin proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) TTGCTGACCGTGCCACTGCAAATCGTGGAGTTCTACCTCATCCTGGCAGCCGTAACCACGGTCGCTGTGGGCTTGTTTTGGCGCCTCCTCGGTGCATCCGTCCTCATGTTGGTCGCTGGATATCTTGGCGAAGTCAATGCGACCGATTCTGGCATGCTGTGGGGCCTGTTTGCCGTCGGGTTCGCCGCATGGTTGTACATCGTCTATGAAATCTTTGCCGGCGAAGCCAGTAAACTGAACGCTGCGAGCGGGTCCGCGGCTTCCCAGCGTGCTTTCCAGGCCCTACGTGTCATCGTCACCTTC LLTVPLQIVEFYLILAAVTTVAVGLFWRLLGASVLMLVAGYLGEVNATDSGMLWGLFAVGFAAWLYIVYEIFAGEASKLNAASGSAASQRAFQALRVIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTGACCGTGCCACTGCAAATCGTGGAGTTCTACCTCATCCTGGCAGCC---------GTA---ACCACGGTCGCTGTG---GGCTTG------------------------------------TTTTGGCGC---CTCCTCGGTGCATCCGTCCTCATGTTGGTCGCTGGATATCTTGGCGAA---------GTC------------------AAT------GCG---------------------------------ACC------------------------------------------------------------------GATTCT---------GGCATGCTGTGGGGCCTG---TTTGCCGTCGGGTTCGCCGCATGGTTGTACATCGTCTATGAAATC---------------TTT------GCC---GGCGAAGCCAGTAAACTGAACGCTGCG------AGC---GGGTCCGCGGCTTCC---CAG---CGT---GCT---TTC---CAG---GCCCTA---CGTGTCATCGTCACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIVEFYLILAA---V-TTVAV-GL------------FWR-LLGASVLMLVAGYLGE---V------N--A-----------T----------------------DS---GMLWGL-FAVGFAAWLYIVYEI-----F--A-GEASKLNAA--S-GSAAS-Q-R-A-F-Q-AL-RVIVTF-------------------------------------------------------------------------------------------------------------------------------- [unk]_KJ929860 [unk] PRGD_OTU311_otuREP_57fbff867e9b11c750a76eaadc25bf53 gb|KJ929860| PRGD_OTU311_otuREP_57fbff867e9b11c750a76eaadc25bf53, putative proteorhodopsin gene, partial cds. PRGD_OTU311_otuREP_57fbff867e9b11c750a76eaadc25bf53, putative proteorhodopsin gene, partial cds. KJ929860 [[root proteorhodopsin]] root proteorhodopsin proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATCCTGACCGTACCCCTTCAGATCGTTGAGTTCTACCTCATCCTCGCCGCGGTCACCAAGGTCTCTGCGAGCCTCTTCTGGCGCCTGATGATCGCCTCGGTGTTGATGCTCGTGGCGGGCTACCTAGGCGAGGTCAACTCGGCCAACGGCGGCATGCTCTGGGGCTTCTTCGTGGTCGGCTTCATCAGCTGGATCTACATCGTGTACGAGATCTTCGCCGGTGAGGCGAGCAAGATCAGCGCCAATGAGGGGACGCCTGCGTCGCAACGTGCCTTCAACGCGCTCCGTATCATCGTGACCTTC ILTVPLQIVEFYLILAAVTKVSASLFWRLMIASVLMLVAGYLGEVNSANGGMLWGFFVVGFISWIYIVYEIFAGEASKISANEGTPASQRAFNALRIIVTF ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCTGACCGTACCCCTTCAGATCGTTGAGTTCTACCTCATCCTCGCCGCG---------GTC---ACCAAGGTCTCTGCG---AGCCTC------------------------------------TTCTGGCGC---CTGATGATCGCCTCGGTGTTGATGCTCGTGGCGGGCTACCTAGGCGAG---------GTC------------------AAC------TCG---------------------------------GCC------------------------------------------------------------------AACGGC---------GGCATGCTCTGGGGCTTC---TTCGTGGTCGGCTTCATCAGCTGGATCTACATCGTGTACGAGATC---------------TTC------GCC---GGTGAGGCGAGCAAGATCAGCGCCAAT------GAG---GGGACGCCTGCGTCG---CAA---CGT---GCC---TTC---AAC---GCGCTC---CGTATCATCGTGACCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLQIVEFYLILAA---V-TKVSA-SL------------FWR-LMIASVLMLVAGYLGE---V------N--S-----------A----------------------NG---GMLWGF-FVVGFISWIYIVYEI-----F--A-GEASKISAN--E-GTPAS-Q-R-A-F-N-AL-RIIVTF-------------------------------------------------------------------------------------------------------------------------------- [unk]_KJ929803 [unk] PRGD_OTU254_otuREP_f24e8d655242a8fbb8e6110e9061fa6e gb|KJ929803| PRGD_OTU254_otuREP_f24e8d655242a8fbb8e6110e9061fa6e, putative proteorhodopsin gene, partial cds. PRGD_OTU254_otuREP_f24e8d655242a8fbb8e6110e9061fa6e, putative proteorhodopsin gene, partial cds. KJ929803 [[root proteorhodopsin]] root proteorhodopsin proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -23.5287 -117.8637 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Mediterranean Sea (33.935, 18.508) CTTCTCACGGTGCCGCTGCAAATCATCGAGTTCTACTTGATCCTTGCCGCAATCACTGCGGTCGCATCGTCGCTTTTCTGGCGTCTGATGACTGCATCCGTCGTCATGCTTGTCGCGGGCTACCTCGGCGAGGTTGCCGGTGCAGGATCGAGCGCTCTGTGGCCTTGCTTCGCCGTTGGTCTGGCCAGCTGGCTGTACATCGTGTACGAAATCTTCGCCGGCGAAGCCAGCAAGATCAGCGCCGAGAATGGAACGCCAGCCTCGCAGAAGGCCTTCAACGCCCTGCGCCTCATCGTCACCGTT LLTVPLQIIEFYLILAAITAVASSLFWRLMTASVVMLVAGYLGEVAGAGSSALWPCFAVGLASWLYIVYEIFAGEASKISAENGTPASQKAFNALRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTCACGGTGCCGCTGCAAATCATCGAGTTCTACTTGATCCTTGCCGCA---------ATC---ACTGCGGTCGCATCG---TCGCTT------------------------------------TTCTGGCGT---CTGATGACTGCATCCGTCGTCATGCTTGTCGCGGGCTACCTCGGCGAG---------GTT------------------GCC------GGT---------------------------------GCA------------------------------------------------------------------GGATCG---------AGCGCTCTGTGGCCTTGC---TTCGCCGTTGGTCTGGCCAGCTGGCTGTACATCGTGTACGAAATC---------------TTC------GCC---GGCGAAGCCAGCAAGATCAGCGCCGAG------AAT---GGAACGCCAGCCTCG---CAG---AAG---GCC---TTC---AAC---GCCCTG---CGCCTCATCGTCACCGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLQIIEFYLILAA---I-TAVAS-SL------------FWR-LMTASVVMLVAGYLGE---V------A--G-----------A----------------------GS---SALWPC-FAVGLASWLYIVYEI-----F--A-GEASKISAE--N-GTPAS-Q-K-A-F-N-AL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk]_KJ929865 [unk] PRGD_OTU316_otuREP_80af9bb80d61f9a3bf0c2b2b10593167 gb|KJ929865| PRGD_OTU316_otuREP_80af9bb80d61f9a3bf0c2b2b10593167, putative proteorhodopsin gene, partial cds. PRGD_OTU316_otuREP_80af9bb80d61f9a3bf0c2b2b10593167, putative proteorhodopsin gene, partial cds. KJ929865 [[root proteorhodopsin]] root proteorhodopsin proteorhodopsin proton pump na ; V108 light-energy conversion (ion transport) Blue (Q105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 07-janv-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATGATCAGTGTTCCGATGCAGGTGATGGTGATGTATTTCTTCATCGCCACAGTCTCCAGGCCGCCGATCGGTCTGTTCTGGCGTCTGCTGGTGGTCTCTGTGGTGATGATCCTGGCGCGATACATGGGTGAGGTCGGATTCATGTATTCCACCCTTGGCTTCCTGATCGGCATTGTCGGCTGGCTGTATATCCTGGGCGAGGTTTATTTTGGGCGGCTGGGCGACATCAATTCCAAGAATGGCAGCGAGACGGTGCAAAGCGGGTTCTTCTGGCTGCGCCTAATCGTGACGGTG MISVPMQVMVMYFFIATVSRPPIGLFWRLLVVSVVMILARYMGEVGFMYSTLGFLIGIVGWLYILGEVYFGRLGDINSKNGSETVQSGFFWLRLIVTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGATCAGTGTTCCGATGCAGGTGATGGTGATGTATTTCTTCATCGCCACA---------GTC---TCCAGGCCGCCGATC---GGTCTG------------------------------------TTCTGGCGT---CTGCTGGTGGTCTCTGTGGTGATGATCCTGGCGCGATACATGGGTGAG---------GTC------------------GGA------TTC---------------------------------ATG------------------------------------------------------------------TATTCC------------------ACCCTTGGC---TTCCTGATCGGCATTGTCGGCTGGCTGTATATCCTGGGCGAGGTT---------------TAT------TTT---GGGCGGCTGGGCGACATCAATTCCAAG------AAT---GGCAGCGAGACGGTG---CAA---AGC---GGG---TTC---TTC---TGGCTG---CGCCTAATCGTGACGGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MISVPMQVMVMYFFIAT---V-SRPPI-GL------------FWR-LLVVSVVMILARYMGE---V------G--F-----------M----------------------YS------TLG-FLIGIVGWLYILGEV-----Y--F-GRLGDINSK--N-GSETV-Q-S-G-F-F-WL-RLIVTV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929284 [unk-env1-c] PRGD_OTU098_126e0cf533320cc70ad539874931aaee gb|KJ929284| PRGD_OTU098_126e0cf533320cc70ad539874931aaee, putative proteorhodopsin gene, partial cds. PRGD_OTU098_126e0cf533320cc70ad539874931aaee, putative proteorhodopsin gene, partial cds. KJ929284 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (76.3333, 14.8833), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73) ACATTAACAGTGCCATTGATGTGCGTAGAATTTTATCTACTTACAAGGGCTGCCGGAGCTACTAAAAGTTTATTGTGGAAATTAATTATTGCATCAGCATGGATGTTGATTGCGGGTTACATTGGTGAAGCATTTACGGATGGTTCAACAGCTCACTCTGTAAAATGGGGTGTATTATCTACAATAGGTTATATCTACATTTTGTACACAGCATGGTTTGGTGAAGTAGCACAATTGGCTGAGAAGAGCAATTCTGACGTAGTCAAAAAAGGTGTTCGTACACTAGCATGGTTTGTATTGGTT TLTVPLMCVEFYLLTRAAGATKSLLWKLIIASAWMLIAGYIGEAFTDGSTAHSVKWGVLSTIGYIYILYTAWFGEVAQLAEKSNSDVVKKGVRTLAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATTAACAGTGCCATTGATGTGCGTAGAATTTTATCTACTTACAAGGGCT---------GCC------GGAGCTACTAAA---AGTTTA------------------------------------TTGTGGAAA---TTAATTATTGCATCAGCATGGATGTTGATTGCGGGTTACATTGGTGAA---------GCA------------------TTT------ACGGAT---------------------------------GGT------------------TCA---------ACA---------------------------GCTCACTCT------------------GTAAAATGG---GGTGTATTATCTACAATAGGTTATATCTACATTTTGTACACAGCA---------------TGG------TTT---GGTGAAGTAGCACAATTGGCTGAGAAG------AGC---AATTCTGACGTAGTC---AAA---AAA---GGT---GTT---CGT---ACACTA---GCATGGTTTGTATTGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTRA---A--GATK-SL------------LWK-LIIASAWMLIAGYIGE---A------F--TD-----------G------S---T---------AHS------VKW-GVLSTIGYIYILYTA-----W--F-GEVAQLAEK--S-NSDVV-K-K-G-V-R-TL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929288 [unk-env1-c] PRGD_OTU098_6d7ec00a459021b77f3206553bec23ae gb|KJ929288| PRGD_OTU098_6d7ec00a459021b77f3206553bec23ae, putative proteorhodopsin gene, partial cds. PRGD_OTU098_6d7ec00a459021b77f3206553bec23ae, putative proteorhodopsin gene, partial cds. KJ929288 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ACGTTAACAGTTCCTCTAATGTGTGTAGAATTTTATCTACTTACGAGAGCTGCTGGCGCGACTAAGAGTCTATTGTGGAAATTAATCATCGCATCTGTGTGGATGCTAGTCGCTGGTTATATCGGTGAGGCGTTTACAGATGGTTCTACTGGTCATTCAGTAAAATGGGGTGTATTATCTACATTAGGTTATATCTATATTTTATACACTGCATGGTTTGGTGAAGTAGCACAATTGGCTGAGAAGAGTAACTCTGACGTAGTCAAAAAAGGTGTTCGTACGCTAGCATGGTTTGTATTAGTT TLTVPLMCVEFYLLTRAAGATKSLLWKLIIASVWMLVAGYIGEAFTDGSTGHSVKWGVLSTLGYIYILYTAWFGEVAQLAEKSNSDVVKKGVRTLAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGTTAACAGTTCCTCTAATGTGTGTAGAATTTTATCTACTTACGAGAGCT---------GCT------GGCGCGACTAAG---AGTCTA------------------------------------TTGTGGAAA---TTAATCATCGCATCTGTGTGGATGCTAGTCGCTGGTTATATCGGTGAG---------GCG------------------TTT------ACAGAT---------------------------------GGT------------------TCT---------ACT---------------------------GGTCATTCA------------------GTAAAATGG---GGTGTATTATCTACATTAGGTTATATCTATATTTTATACACTGCA---------------TGG------TTT---GGTGAAGTAGCACAATTGGCTGAGAAG------AGT---AACTCTGACGTAGTC---AAA---AAA---GGT---GTT---CGT---ACGCTA---GCATGGTTTGTATTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTRA---A--GATK-SL------------LWK-LIIASVWMLVAGYIGE---A------F--TD-----------G------S---T---------GHS------VKW-GVLSTLGYIYILYTA-----W--F-GEVAQLAEK--S-NSDVV-K-K-G-V-R-TL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929285 [unk-env1-c] PRGD_OTU098_20a9731d2ebede6d436ae154fe3fe64d gb|KJ929285| PRGD_OTU098_20a9731d2ebede6d436ae154fe3fe64d, putative proteorhodopsin gene, partial cds. PRGD_OTU098_20a9731d2ebede6d436ae154fe3fe64d, putative proteorhodopsin gene, partial cds. KJ929285 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) ACATTAACAGTGCCGCTAATGTGTGTAGAGTTTTATCTACTAACTAGGGCTGCTGGGGCTACAAAGAGTTTATTGTGGAAGCTAATTATTGCATCAGTATGGATGTTGGTTGCCGGATATATCGGTGAATCATTTAATCCAGAAGGTGGCGATACAGCACATTCAGTAAAATGGGGTGTGATATCTACAATAGGTTACATTTACATTTTATACACTGCATGGTTTGGTGAAGTGGCACAATTGGCTGAGAAGAGTAACTCTGAAGTAGTCAAGAAAGGTGTTCGTACACTAGCATGGTTCGTATTAGTA TLTVPLMCVEFYLLTRAAGATKSLLWKLIIASVWMLVAGYIGESFNPEGGDTAHSVKWGVISTIGYIYILYTAWFGEVAQLAEKSNSEVVKKGVRTLAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATTAACAGTGCCGCTAATGTGTGTAGAGTTTTATCTACTAACTAGGGCT---------GCT------GGGGCTACAAAG---AGTTTA------------------------------------TTGTGGAAG---CTAATTATTGCATCAGTATGGATGTTGGTTGCCGGATATATCGGTGAA---------TCA------------------TTT------AATCCA------------------------GAAGGT---GGC------------------GAT---------ACA---------------------------GCACATTCA------------------GTAAAATGG---GGTGTGATATCTACAATAGGTTACATTTACATTTTATACACTGCA---------------TGG------TTT---GGTGAAGTGGCACAATTGGCTGAGAAG------AGT---AACTCTGAAGTAGTC---AAG---AAA---GGT---GTT---CGT---ACACTA---GCATGGTTCGTATTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTRA---A--GATK-SL------------LWK-LIIASVWMLVAGYIGE---S------F--NP--------EG-G------D---T---------AHS------VKW-GVISTIGYIYILYTA-----W--F-GEVAQLAEK--S-NSEVV-K-K-G-V-R-TL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929287 [unk-env1-c] PRGD_OTU098_5625752187ed3171f96dbc20341e577c gb|KJ929287| PRGD_OTU098_5625752187ed3171f96dbc20341e577c, putative proteorhodopsin gene, partial cds. PRGD_OTU098_5625752187ed3171f96dbc20341e577c, putative proteorhodopsin gene, partial cds. KJ929287 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683) ACATTAACAGTGCCGCTAATGTGTGTAGAGTTTTATCTACTAACTAGGGCTGCTGGGGCTACAAAGAGTTTATTGTGGAAACTAATTATTGCATCAGTATGGATGTTGGTTGCCGGATATATCGGTGAATCATTTAATCCAGAAGGTGGCGATACAGCACATTCAGTAAAATGGGGTGTGATATCTACAATAGGTTACATTTACATTTTATACACTGCATGGTTTGGTGAAGTGGCACAATTGGCTGAGAAGAGTAATTCTGAAGTAGTCAAGAAAGGTGTTCGTACACTAGCATGGTTCGTTCTAGTA TLTVPLMCVEFYLLTRAAGATKSLLWKLIIASVWMLVAGYIGESFNPEGGDTAHSVKWGVISTIGYIYILYTAWFGEVAQLAEKSNSEVVKKGVRTLAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATTAACAGTGCCGCTAATGTGTGTAGAGTTTTATCTACTAACTAGGGCT---------GCT------GGGGCTACAAAG---AGTTTA------------------------------------TTGTGGAAA---CTAATTATTGCATCAGTATGGATGTTGGTTGCCGGATATATCGGTGAA---------TCA------------------TTT------AATCCA------------------------GAAGGT---GGC------------------GAT---------ACA---------------------------GCACATTCA------------------GTAAAATGG---GGTGTGATATCTACAATAGGTTACATTTACATTTTATACACTGCA---------------TGG------TTT---GGTGAAGTGGCACAATTGGCTGAGAAG------AGT---AATTCTGAAGTAGTC---AAG---AAA---GGT---GTT---CGT---ACACTA---GCATGGTTCGTTCTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTRA---A--GATK-SL------------LWK-LIIASVWMLVAGYIGE---S------F--NP--------EG-G------D---T---------AHS------VKW-GVISTIGYIYILYTA-----W--F-GEVAQLAEK--S-NSEVV-K-K-G-V-R-TL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929612 [unk-env1-c] PRGD_OTU169_06b7cf98ba823a6f26f92a099ccd80df gb|KJ929612| PRGD_OTU169_06b7cf98ba823a6f26f92a099ccd80df, putative proteorhodopsin gene, partial cds. PRGD_OTU169_06b7cf98ba823a6f26f92a099ccd80df, putative proteorhodopsin gene, partial cds. KJ929612 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ACTCTTACTGTACCATTAATGTGTGTAGAATTTTATCTATTAACAAAAGCAGCTGGTGCTACTAAAGGTTTAATGTGGAAACTTATTCTTGCTTCAGCATGGATGTTGATTGCCGGTTACATCGGTGAGGCATTCAATCCAGAAGGAGGAAGTACTTCGCATTCAGTTACTTGGGGAGTTTTATCTACTATAGGTTATGTGTATGTTTTGTACTCTGCCTGGATGGGTGAAGTTGCTAAACTAGCCGAAAGTAGTGGTGATCCTGTAGTTCAAAAAGGTGTTCGTACATTAGCATGGTTTGTACTTGTA TLTVPLMCVEFYLLTKAAGATKGLMWKLILASAWMLIAGYIGEAFNPEGGSTSHSVTWGVLSTIGYVYVLYSAWMGEVAKLAESSGDPVVQKGVRTLAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCTTACTGTACCATTAATGTGTGTAGAATTTTATCTATTAACAAAAGCA---------GCT------GGTGCTACTAAA---GGTTTA------------------------------------ATGTGGAAA---CTTATTCTTGCTTCAGCATGGATGTTGATTGCCGGTTACATCGGTGAG---------GCA------------------TTC------AATCCA------------------------GAAGGA---GGA------------------AGT---------ACT---------------------------TCGCATTCA------------------GTTACTTGG---GGAGTTTTATCTACTATAGGTTATGTGTATGTTTTGTACTCTGCC---------------TGG------ATG---GGTGAAGTTGCTAAACTAGCCGAAAGT------AGT---GGTGATCCTGTAGTT---CAA---AAA---GGT---GTT---CGT---ACATTA---GCATGGTTTGTACTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTKA---A--GATK-GL------------MWK-LILASAWMLIAGYIGE---A------F--NP--------EG-G------S---T---------SHS------VTW-GVLSTIGYVYVLYSA-----W--M-GEVAKLAES--S-GDPVV-Q-K-G-V-R-TL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929613 [unk-env1-c] PRGD_OTU169_c94e24acd31b21b7fa33a0283f275b04 gb|KJ929613| PRGD_OTU169_c94e24acd31b21b7fa33a0283f275b04, putative proteorhodopsin gene, partial cds. PRGD_OTU169_c94e24acd31b21b7fa33a0283f275b04, putative proteorhodopsin gene, partial cds. KJ929613 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683) ACTCTTACTGTTCCATTAATGTGTGTAGAATTTTACCTACTAACGAAAGCGGCAGGTGCTACTAAAGGTCTAATGTGGAAACTTATACTTGCTTCAGCATGGATGTTGATTGCCGGATATATCGGTGAAGCATTCAATCCAGAAGGAGGTAGTACTTCGCATTCAGTTACATGGGGAGTTTTATCTACTATAGGTTATGTGTATGTTTTGTACTCTGCCTGGATGGGTGAAGTTGCTAAATTAGCCGAAAGTAGTGGTGACCCTGTAGTTCAGAAAGGTGTTCGTACATTAGCATGGTTTGTACTTGTA TLTVPLMCVEFYLLTKAAGATKGLMWKLILASAWMLIAGYIGEAFNPEGGSTSHSVTWGVLSTIGYVYVLYSAWMGEVAKLAESSGDPVVQKGVRTLAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCTTACTGTTCCATTAATGTGTGTAGAATTTTACCTACTAACGAAAGCG---------GCA------GGTGCTACTAAA---GGTCTA------------------------------------ATGTGGAAA---CTTATACTTGCTTCAGCATGGATGTTGATTGCCGGATATATCGGTGAA---------GCA------------------TTC------AATCCA------------------------GAAGGA---GGT------------------AGT---------ACT---------------------------TCGCATTCA------------------GTTACATGG---GGAGTTTTATCTACTATAGGTTATGTGTATGTTTTGTACTCTGCC---------------TGG------ATG---GGTGAAGTTGCTAAATTAGCCGAAAGT------AGT---GGTGACCCTGTAGTT---CAG---AAA---GGT---GTT---CGT---ACATTA---GCATGGTTTGTACTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTKA---A--GATK-GL------------MWK-LILASAWMLIAGYIGE---A------F--NP--------EG-G------S---T---------SHS------VTW-GVLSTIGYVYVLYSA-----W--M-GEVAKLAES--S-GDPVV-Q-K-G-V-R-TL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929549 [unk-env1-c] PRGD_OTU150_fbc3bb2eae1d63c89d44556a5b185ffa gb|KJ929549| PRGD_OTU150_fbc3bb2eae1d63c89d44556a5b185ffa, putative proteorhodopsin gene, partial cds. PRGD_OTU150_fbc3bb2eae1d63c89d44556a5b185ffa, putative proteorhodopsin gene, partial cds. KJ929549 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-33.28, 45.35) ACATTAACAGTTCCATTGATGTGTGTAGAATTTTATTTACTAACTAAAGCTGCAGGGGCAAAAGTCGGGTTGCTTGTTAAGCTTATTATCGCATCAACCTGGATGTTAGTTGCAGGTTATATCGGCGAAGCATTCAACCCCGCAGGAGGTGATACAGCACATTCAGTAATGTGGGGTGTTTTGTCTACAGTGGGTTATTTGTATATCCTCTACACTGCCTGGGTTGGTGAAGTTGCCAAACTTGCTGAAAAAAGTGGCGATGCTGTCGTTCAAAAAGGAGTGCGTATCCTTGCATGGTTTGTACTTGTT TLTVPLMCVEFYLLTKAAGAKVGLLVKLIIASTWMLVAGYIGEAFNPAGGDTAHSVMWGVLSTVGYLYILYTAWVGEVAKLAEKSGDAVVQKGVRILAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATTAACAGTTCCATTGATGTGTGTAGAATTTTATTTACTAACTAAAGCT---------GCA------GGGGCAAAAGTC---GGGTTG------------------------------------CTTGTTAAG---CTTATTATCGCATCAACCTGGATGTTAGTTGCAGGTTATATCGGCGAA---------GCA------------------TTC------AACCCC------------------------GCAGGA---GGT------------------GAT---------ACA---------------------------GCACATTCA------------------GTAATGTGG---GGTGTTTTGTCTACAGTGGGTTATTTGTATATCCTCTACACTGCC---------------TGG------GTT---GGTGAAGTTGCCAAACTTGCTGAAAAA------AGT---GGCGATGCTGTCGTT---CAA---AAA---GGA---GTG---CGT---ATCCTT---GCATGGTTTGTACTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTKA---A--GAKV-GL------------LVK-LIIASTWMLVAGYIGE---A------F--NP--------AG-G------D---T---------AHS------VMW-GVLSTVGYLYILYTA-----W--V-GEVAKLAEK--S-GDAVV-Q-K-G-V-R-IL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929896 [unk-env1-c] PRGD_OTU347_otuREP_7e1846fc9e20b9c05c04b86396790445 gb|KJ929896| PRGD_OTU347_otuREP_7e1846fc9e20b9c05c04b86396790445, putative proteorhodopsin gene, partial cds. PRGD_OTU347_otuREP_7e1846fc9e20b9c05c04b86396790445, putative proteorhodopsin gene, partial cds. KJ929896 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTCTGACTGTGCCTTTAATGTGTGTAGAATTTTACTTACTAACTAAATTAGCTGGTGCCAAGAAAAGCTTGCTATGGAAGCTTATTTTAGCTTCTGTATGGATGCTAATTGCCGGTTACATTGGTGAGTCTTTCAATCCAGAAGGTGGAAGTACTACTCATTCTGTAACTTGGGGTGTATTATCTACCATTGGTTACTTGTATGTATTACACGCTGCTTGGTTTGGTGAAGTTGCACAACTTGCTGCAAAAAGTGAGTCTGCTGCAGTTAAAACCGGTGTAAGAACTTTAGCTTGGTTTGTATTAGTT ILTVPLMCVEFYLLTKLAGAKKSLLWKLILASVWMLIAGYIGESFNPEGGSTTHSVTWGVLSTIGYLYVLHAAWFGEVAQLAAKSESAAVKTGVRTLAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTGACTGTGCCTTTAATGTGTGTAGAATTTTACTTACTAACTAAATTA---------GCT------GGTGCCAAGAAA---AGCTTG------------------------------------CTATGGAAG---CTTATTTTAGCTTCTGTATGGATGCTAATTGCCGGTTACATTGGTGAG---------TCT------------------TTC------AATCCA------------------------GAAGGT---GGA------------------AGT---------ACT---------------------------ACTCATTCT------------------GTAACTTGG---GGTGTATTATCTACCATTGGTTACTTGTATGTATTACACGCTGCT---------------TGG------TTT---GGTGAAGTTGCACAACTTGCTGCAAAA------AGT---GAGTCTGCTGCAGTT---AAA---ACC---GGT---GTA---AGA---ACTTTA---GCTTGGTTTGTATTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLTKL---A--GAKK-SL------------LWK-LILASVWMLIAGYIGE---S------F--NP--------EG-G------S---T---------THS------VTW-GVLSTIGYLYVLHAA-----W--F-GEVAQLAAK--S-ESAAV-K-T-G-V-R-TL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929289 [unk-env1-c] PRGD_OTU098_d94dd5f0161d61a16f627adb48718e60 gb|KJ929289| PRGD_OTU098_d94dd5f0161d61a16f627adb48718e60, putative proteorhodopsin gene, partial cds. PRGD_OTU098_d94dd5f0161d61a16f627adb48718e60, putative proteorhodopsin gene, partial cds. KJ929289 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) ACCTTAACTGTACCTTTAATGTGTGTTGAGTTTTACCTACTGACAAGAGCAGCAGGAGCAACCAAAAGTTTATTATGGAAACTAATTATTGCATCTGTATGGATGTTAGTAGCTGGTTACATAGGAGAATCGTTCAACCCAGAGGGAGGTAGCACAAGCCACTCAGTAACATGGGGTGTACTTTCTACTATTGGTTACATTTACATCTTACACGCAGCTTGGTTTGGTGAAGTAGCACAACTAGCGGAAAAAAGTGATTCGGACACTGTGAAAAATGGTGTACGTACATTGGCTTGGTTCGTATTAGTT TLTVPLMCVEFYLLTRAAGATKSLLWKLIIASVWMLVAGYIGESFNPEGGSTSHSVTWGVLSTIGYIYILHAAWFGEVAQLAEKSDSDTVKNGVRTLAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCTTAACTGTACCTTTAATGTGTGTTGAGTTTTACCTACTGACAAGAGCA---------GCA------GGAGCAACCAAA---AGTTTA------------------------------------TTATGGAAA---CTAATTATTGCATCTGTATGGATGTTAGTAGCTGGTTACATAGGAGAA---------TCG------------------TTC------AACCCA------------------------GAGGGA---GGT------------------AGC---------ACA---------------------------AGCCACTCA------------------GTAACATGG---GGTGTACTTTCTACTATTGGTTACATTTACATCTTACACGCAGCT---------------TGG------TTT---GGTGAAGTAGCACAACTAGCGGAAAAA------AGT---GATTCGGACACTGTG---AAA---AAT---GGT---GTA---CGT---ACATTG---GCTTGGTTCGTATTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTRA---A--GATK-SL------------LWK-LIIASVWMLVAGYIGE---S------F--NP--------EG-G------S---T---------SHS------VTW-GVLSTIGYIYILHAA-----W--F-GEVAQLAEK--S-DSDTV-K-N-G-V-R-TL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929700 [unk-env1-c] PRGD_OTU202_otuREP_47e57fc278b067b71ff81ce9f8819b04 gb|KJ929700| PRGD_OTU202_otuREP_47e57fc278b067b71ff81ce9f8819b04, putative proteorhodopsin gene, partial cds. PRGD_OTU202_otuREP_47e57fc278b067b71ff81ce9f8819b04, putative proteorhodopsin gene, partial cds. KJ929700 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-23.5956, 69.0419) ACTTTAACGGTTCCGTTGATGTGTGTAGAATTTTATTTATTAACTAAGCCAGCTGGAGCTTCAAGAGGCTTAATGTGGAAACTAATTATAGCATCTGTATGGATGTTAGTTGCCGGATATATTGGAGAAGCTTTCAACCCAGCGTTAACTTCAGGCGTTGCTTCTGATGGCACGTCTCATTCAGTAATGTGGGGTGTAATCTCAACGTTAGGTTACTTATATGTATTACATGCGGCATGGTTCGGTGAAGTTGCACAACTAGCTGAAAAAAGTGATTCTGCTGTAGTTAAAAAAGGTGTTCGTACATTGGCTTGGTTCGTATTAGTC TLTVPLMCVEFYLLTKPAGASRGLMWKLIIASVWMLVAGYIGEAFNPALTSGVASDGTSHSVMWGVISTLGYLYVLHAAWFGEVAQLAEKSDSAVVKKGVRTLAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTTAACGGTTCCGTTGATGTGTGTAGAATTTTATTTATTAACTAAGCCA---------GCT------GGAGCTTCAAGA---GGCTTA------------------------------------ATGTGGAAA---CTAATTATAGCATCTGTATGGATGTTAGTTGCCGGATATATTGGAGAA---------GCT------------------TTC------AACCCA------GCGTTAACTTCAGGCGTTGCTTCT---GAT------------------GGC---------ACG---------------------------TCTCATTCA------------------GTAATGTGG---GGTGTAATCTCAACGTTAGGTTACTTATATGTATTACATGCGGCA---------------TGG------TTC---GGTGAAGTTGCACAACTAGCTGAAAAA------AGT---GATTCTGCTGTAGTT---AAA---AAA---GGT---GTT---CGT---ACATTG---GCTTGGTTCGTATTAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTKP---A--GASR-GL------------MWK-LIIASVWMLVAGYIGE---A------F--NP--ALTSGVAS-D------G---T---------SHS------VMW-GVISTLGYLYVLHAA-----W--F-GEVAQLAEK--S-DSAVV-K-K-G-V-R-TL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929701 [unk-env1-c] PRGD_OTU202_50ef9a6bde2b0fe60ba25285ec76acc6 gb|KJ929701| PRGD_OTU202_50ef9a6bde2b0fe60ba25285ec76acc6, putative proteorhodopsin gene, partial cds. PRGD_OTU202_50ef9a6bde2b0fe60ba25285ec76acc6, putative proteorhodopsin gene, partial cds. KJ929701 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 1999 #na Atlantic Ocean-Gibraltar strait marine 36.0987 -5.1975 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (72.0542, -130.8781), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) ACTTTAACGGTTCCGTTAATGTGTGTAGAATTCTATTTATTAACTAAGCCAGCTGGAGCTTCAAGAGGCTTAATGTGGAAACTAATTATTGCATCTGTATGGATGTTAGTTGCCGGATATATTGGAGAAGCTTTCAATCCAGCGTTAACTACAGGTGTTGCTTCTGATGGCACGTCTCATTCAGTAATGTGGGGTGTAATCTCAACGTTAGGTTACTTATATGTATTACATGCAGCATGGTTCGGTGAAGTTGCACAACTAGCTGAAAAAAGTGATTCTGCTGTAGTTAAAAAAGGTGTTCGTACATTGGCTTGGTTTGTATTAGTC TLTVPLMCVEFYLLTKPAGASRGLMWKLIIASVWMLVAGYIGEAFNPALTTGVASDGTSHSVMWGVISTLGYLYVLHAAWFGEVAQLAEKSDSAVVKKGVRTLAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTTAACGGTTCCGTTAATGTGTGTAGAATTCTATTTATTAACTAAGCCA---------GCT------GGAGCTTCAAGA---GGCTTA------------------------------------ATGTGGAAA---CTAATTATTGCATCTGTATGGATGTTAGTTGCCGGATATATTGGAGAA---------GCT------------------TTC------AATCCA------GCGTTAACTACAGGTGTTGCTTCT---GAT------------------GGC---------ACG---------------------------TCTCATTCA------------------GTAATGTGG---GGTGTAATCTCAACGTTAGGTTACTTATATGTATTACATGCAGCA---------------TGG------TTC---GGTGAAGTTGCACAACTAGCTGAAAAA------AGT---GATTCTGCTGTAGTT---AAA---AAA---GGT---GTT---CGT---ACATTG---GCTTGGTTTGTATTAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTKP---A--GASR-GL------------MWK-LIIASVWMLVAGYIGE---A------F--NP--ALTTGVAS-D------G---T---------SHS------VMW-GVISTLGYLYVLHAA-----W--F-GEVAQLAEK--S-DSAVV-K-K-G-V-R-TL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929201 [unk-env1-c] PRGD_OTU087_3fa302e466532e119570d69c5a798fbe gb|KJ929201| PRGD_OTU087_3fa302e466532e119570d69c5a798fbe, putative proteorhodopsin gene, partial cds. PRGD_OTU087_3fa302e466532e119570d69c5a798fbe, putative proteorhodopsin gene, partial cds. KJ929201 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ACACTAACAGTGCCATTAATGTGTGTGGAGTTTTATTTATTAACTAAAGCTGCTGGAGCTACAAGATCACTATTGTGGAAACTAATTATTGCTTCTACATGGATGTTAGTTTGTGGATATATTGGAGAAGCTTTCTCTGATGGAACAACGGGACATTCAGTACAATGGGGTGTATTATCTACACTTGGATATATCTACATACTACACGCTGTATGGTTAGGTGAAGTAGCACAACTTGCAGATGCAAGTAAGTCAGATGTAGTAAAAAGAGGAGTAAGAACACTTGCTTGGTTTGTACTTGTT TLTVPLMCVEFYLLTKAAGATRSLLWKLIIASTWMLVCGYIGEAFSDGTTGHSVQWGVLSTLGYIYILHAVWLGEVAQLADASKSDVVKRGVRTLAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACTAACAGTGCCATTAATGTGTGTGGAGTTTTATTTATTAACTAAAGCT---------GCT------GGAGCTACAAGA---TCACTA------------------------------------TTGTGGAAA---CTAATTATTGCTTCTACATGGATGTTAGTTTGTGGATATATTGGAGAA---------GCT------------------TTC------TCTGAT---------------------------------GGA------------------ACA---------ACG---------------------------GGACATTCA------------------GTACAATGG---GGTGTATTATCTACACTTGGATATATCTACATACTACACGCTGTA---------------TGG------TTA---GGTGAAGTAGCACAACTTGCAGATGCA------AGT---AAGTCAGATGTAGTA---AAA---AGA---GGA---GTA---AGA---ACACTT---GCTTGGTTTGTACTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTKA---A--GATR-SL------------LWK-LIIASTWMLVCGYIGE---A------F--SD-----------G------T---T---------GHS------VQW-GVLSTLGYIYILHAV-----W--L-GEVAQLADA--S-KSDVV-K-R-G-V-R-TL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929200 [unk-env1-c] PRGD_OTU087_otuREP_be2553bbda42383bcd29e006bcc72108 gb|KJ929200| PRGD_OTU087_otuREP_be2553bbda42383bcd29e006bcc72108, putative proteorhodopsin gene, partial cds. PRGD_OTU087_otuREP_be2553bbda42383bcd29e006bcc72108, putative proteorhodopsin gene, partial cds. KJ929200 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ACACTAACAGTTCCTTTGATGTGTGTAGAGTTTTATTTATTAACTAAAGCTGCTGGTGCGACTAGATCACTATTGTGGAAACTAATTATAGCATCTACTTGGATGTTAGTTTGTGGATACATTGGAGAAGCTTTTTCAGACGGAACTACTGGACATTCGGTACAATGGGGTGTATTATCAACACTTGGTTACGTTTACATCCTTCACGCTGTATGGTTAGGTGAAGTAGCACAATTAGCAGATGCAAGCAAGTCAGATGTAGTAAAAAAAGGAGTTAGAGCACTTGCATGGTTTGTACTAGTT TLTVPLMCVEFYLLTKAAGATRSLLWKLIIASTWMLVCGYIGEAFSDGTTGHSVQWGVLSTLGYVYILHAVWLGEVAQLADASKSDVVKKGVRALAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACTAACAGTTCCTTTGATGTGTGTAGAGTTTTATTTATTAACTAAAGCT---------GCT------GGTGCGACTAGA---TCACTA------------------------------------TTGTGGAAA---CTAATTATAGCATCTACTTGGATGTTAGTTTGTGGATACATTGGAGAA---------GCT------------------TTT------TCAGAC---------------------------------GGA------------------ACT---------ACT---------------------------GGACATTCG------------------GTACAATGG---GGTGTATTATCAACACTTGGTTACGTTTACATCCTTCACGCTGTA---------------TGG------TTA---GGTGAAGTAGCACAATTAGCAGATGCA------AGC---AAGTCAGATGTAGTA---AAA---AAA---GGA---GTT---AGA---GCACTT---GCATGGTTTGTACTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTKA---A--GATR-SL------------LWK-LIIASTWMLVCGYIGE---A------F--SD-----------G------T---T---------GHS------VQW-GVLSTLGYVYILHAV-----W--L-GEVAQLADA--S-KSDVV-K-K-G-V-R-AL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929204 [unk-env1-c] PRGD_OTU087_cdda17f871b47bde44d53ba5e4bd91aa gb|KJ929204| PRGD_OTU087_cdda17f871b47bde44d53ba5e4bd91aa, putative proteorhodopsin gene, partial cds. PRGD_OTU087_cdda17f871b47bde44d53ba5e4bd91aa, putative proteorhodopsin gene, partial cds. KJ929204 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ACACTAACTGTGCCATTAATGTGTGTAGAGTTTTATTTATTAACTAAAGCTGCTGGTGCGACTAGATCACTATTGTGGAAACTAATTATAGCATCAACTTGGATGTTAGTTTGTGGATACATTGGAGAAGCTTTCTCAGACGGAACTACTGGACATTCAGTACAATGGGGTGTATTATCAACTCTTGGTTACGTTTACATCCTTCACGCTGTATGGTTAGGTGAAGTAGCACAATTAGCAGATGCAAGCAAGTCAGATGTAGTAAAAAAAGGAGTTAGAGCACTTGCATGGTTTGTACTAGTT TLTVPLMCVEFYLLTKAAGATRSLLWKLIIASTWMLVCGYIGEAFSDGTTGHSVQWGVLSTLGYVYILHAVWLGEVAQLADASKSDVVKKGVRALAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACTAACTGTGCCATTAATGTGTGTAGAGTTTTATTTATTAACTAAAGCT---------GCT------GGTGCGACTAGA---TCACTA------------------------------------TTGTGGAAA---CTAATTATAGCATCAACTTGGATGTTAGTTTGTGGATACATTGGAGAA---------GCT------------------TTC------TCAGAC---------------------------------GGA------------------ACT---------ACT---------------------------GGACATTCA------------------GTACAATGG---GGTGTATTATCAACTCTTGGTTACGTTTACATCCTTCACGCTGTA---------------TGG------TTA---GGTGAAGTAGCACAATTAGCAGATGCA------AGC---AAGTCAGATGTAGTA---AAA---AAA---GGA---GTT---AGA---GCACTT---GCATGGTTTGTACTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTKA---A--GATR-SL------------LWK-LIIASTWMLVCGYIGE---A------F--SD-----------G------T---T---------GHS------VQW-GVLSTLGYVYILHAV-----W--L-GEVAQLADA--S-KSDVV-K-K-G-V-R-AL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929206 [unk-env1-c] PRGD_OTU087_fabebab95f8cc7d452d96b46aad06c39 gb|KJ929206| PRGD_OTU087_fabebab95f8cc7d452d96b46aad06c39, putative proteorhodopsin gene, partial cds. PRGD_OTU087_fabebab95f8cc7d452d96b46aad06c39, putative proteorhodopsin gene, partial cds. KJ929206 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ACACTAACAGTGCCATTAATGTGTGTAGAGTTTTATTTATTAACTAAAGCTGCTGGTGCGACTAGATCACTATTGTGGAAACTAATTATAGCATCTACTTGGATGTTAGTTTGTGGATACATTGGAGAAGCTTTCTCAGACGGAACTACTGGACATTCAGTTCAATGGGGTGTATTATCAACACTTGGTTATGTTTACATTCTCCACGCTGTATGGTTAGGTGAAGTAGCACAACTAGCAGATGCAAGCAAGTCAGATGTAGTAAAGAAAGGAGTTAGAGCACTTGCATGGTTTGTATTAGTT TLTVPLMCVEFYLLTKAAGATRSLLWKLIIASTWMLVCGYIGEAFSDGTTGHSVQWGVLSTLGYVYILHAVWLGEVAQLADASKSDVVKKGVRALAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACTAACAGTGCCATTAATGTGTGTAGAGTTTTATTTATTAACTAAAGCT---------GCT------GGTGCGACTAGA---TCACTA------------------------------------TTGTGGAAA---CTAATTATAGCATCTACTTGGATGTTAGTTTGTGGATACATTGGAGAA---------GCT------------------TTC------TCAGAC---------------------------------GGA------------------ACT---------ACT---------------------------GGACATTCA------------------GTTCAATGG---GGTGTATTATCAACACTTGGTTATGTTTACATTCTCCACGCTGTA---------------TGG------TTA---GGTGAAGTAGCACAACTAGCAGATGCA------AGC---AAGTCAGATGTAGTA---AAG---AAA---GGA---GTT---AGA---GCACTT---GCATGGTTTGTATTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTKA---A--GATR-SL------------LWK-LIIASTWMLVCGYIGE---A------F--SD-----------G------T---T---------GHS------VQW-GVLSTLGYVYILHAV-----W--L-GEVAQLADA--S-KSDVV-K-K-G-V-R-AL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929207 [unk-env1-c] PRGD_OTU087_fedd302303fab81dc7dfc59f29bbf60c gb|KJ929207| PRGD_OTU087_fedd302303fab81dc7dfc59f29bbf60c, putative proteorhodopsin gene, partial cds. PRGD_OTU087_fedd302303fab81dc7dfc59f29bbf60c, putative proteorhodopsin gene, partial cds. KJ929207 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ACACTAACAGTGCCATTAATGTGTGTAGAGTTTTATTTATTAACTAAAGCTGCTGGAGCAACTAAATCTCTATTGTGGAAACTAATTATAGCTTCTACTTGGATGTTAGTTTGCGGATACATTGGAGAAGCTTTCTCAGACGGAACTACTGGACATTCAGTACAATGGGGTGTGTTATCAACACTTGGTTACGTTTACATTCTTCACGCTGTATGGTTAGGTGAAGTAGCACAATTAGCAGATGCAAGCAAGTCAGATGTAGTTAAAAAAGGAGTTAGAGCACTTGCATGGTTTGTACTAGTT TLTVPLMCVEFYLLTKAAGATKSLLWKLIIASTWMLVCGYIGEAFSDGTTGHSVQWGVLSTLGYVYILHAVWLGEVAQLADASKSDVVKKGVRALAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACTAACAGTGCCATTAATGTGTGTAGAGTTTTATTTATTAACTAAAGCT---------GCT------GGAGCAACTAAA---TCTCTA------------------------------------TTGTGGAAA---CTAATTATAGCTTCTACTTGGATGTTAGTTTGCGGATACATTGGAGAA---------GCT------------------TTC------TCAGAC---------------------------------GGA------------------ACT---------ACT---------------------------GGACATTCA------------------GTACAATGG---GGTGTGTTATCAACACTTGGTTACGTTTACATTCTTCACGCTGTA---------------TGG------TTA---GGTGAAGTAGCACAATTAGCAGATGCA------AGC---AAGTCAGATGTAGTT---AAA---AAA---GGA---GTT---AGA---GCACTT---GCATGGTTTGTACTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTKA---A--GATK-SL------------LWK-LIIASTWMLVCGYIGE---A------F--SD-----------G------T---T---------GHS------VQW-GVLSTLGYVYILHAV-----W--L-GEVAQLADA--S-KSDVV-K-K-G-V-R-AL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929202 [unk-env1-c] PRGD_OTU087_58db4f406f28d64d0d255d2905fabcdc gb|KJ929202| PRGD_OTU087_58db4f406f28d64d0d255d2905fabcdc, putative proteorhodopsin gene, partial cds. PRGD_OTU087_58db4f406f28d64d0d255d2905fabcdc, putative proteorhodopsin gene, partial cds. KJ929202 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683) ACACTTACTGTGCCTCTAATGTGTGTTGAGTTCTATTTGCTAACAAAAGTTGCAGGAGCAAAGAAGTCATTACTTTGGAAATTAATCATTGCATCAACATGGATGTTGGTATGCGGGTACATAGGAGAAGCTATGTCAGATGGAACAACTAGTCATTCAGTTCTATGGGGAGTATTATCGACCCTAGGTTATCTATACATACTTTACACAGTATGGTTAGGTGAAGTTGCTAAGTTAGCTGAATCAAGTAAGTCAGACGCAGTTAAAAGAGGAGTAAGAACATTAGCCTGGTTTGTATTAGTA TLTVPLMCVEFYLLTKVAGAKKSLLWKLIIASTWMLVCGYIGEAMSDGTTSHSVLWGVLSTLGYLYILYTVWLGEVAKLAESSKSDAVKRGVRTLAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACTTACTGTGCCTCTAATGTGTGTTGAGTTCTATTTGCTAACAAAAGTT---------GCA------GGAGCAAAGAAG---TCATTA------------------------------------CTTTGGAAA---TTAATCATTGCATCAACATGGATGTTGGTATGCGGGTACATAGGAGAA---------GCT------------------ATG------TCAGAT---------------------------------GGA------------------ACA---------ACT---------------------------AGTCATTCA------------------GTTCTATGG---GGAGTATTATCGACCCTAGGTTATCTATACATACTTTACACAGTA---------------TGG------TTA---GGTGAAGTTGCTAAGTTAGCTGAATCA------AGT---AAGTCAGACGCAGTT---AAA---AGA---GGA---GTA---AGA---ACATTA---GCCTGGTTTGTATTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTKV---A--GAKK-SL------------LWK-LIIASTWMLVCGYIGE---A------M--SD-----------G------T---T---------SHS------VLW-GVLSTLGYLYILYTV-----W--L-GEVAKLAES--S-KSDAV-K-R-G-V-R-TL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929203 [unk-env1-c] PRGD_OTU087_a8bbf7e136ebf5d90e1ec1268429194a gb|KJ929203| PRGD_OTU087_a8bbf7e136ebf5d90e1ec1268429194a, putative proteorhodopsin gene, partial cds. PRGD_OTU087_a8bbf7e136ebf5d90e1ec1268429194a, putative proteorhodopsin gene, partial cds. KJ929203 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na North Pacific Ocean marine 50.06 -139.53 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), North Pacific Ocean (50.06, -139.53), Indian Ocean (-33.28, 45.35) ACACTTACTGTACCACTAATGTGTGTTGAATTCTACTTATTAACTAAAGCTGCAGGTGCAACTAAGTCTCTTCTTTGGAAACTAATCATTGCTTCAACATGGATGCTAGTTTGTGGTTATATTGGAGAAGCTATGTCAGATGGATCAACTGGTCATTCTGTACAATGGGGTGTATTATCAACTCTAGGTTACCTTTATATTCTTTACACTGTATGGTTAGGTGAAGTTGCTCAGTTAGCTGAAGCAAGTAAGTCTGATGTAGTAAAAAGAGGTGTAAGAACACTAGCATGGTTTGTATTAGTT TLTVPLMCVEFYLLTKAAGATKSLLWKLIIASTWMLVCGYIGEAMSDGSTGHSVQWGVLSTLGYLYILYTVWLGEVAQLAEASKSDVVKRGVRTLAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACTTACTGTACCACTAATGTGTGTTGAATTCTACTTATTAACTAAAGCT---------GCA------GGTGCAACTAAG---TCTCTT------------------------------------CTTTGGAAA---CTAATCATTGCTTCAACATGGATGCTAGTTTGTGGTTATATTGGAGAA---------GCT------------------ATG------TCAGAT---------------------------------GGA------------------TCA---------ACT---------------------------GGTCATTCT------------------GTACAATGG---GGTGTATTATCAACTCTAGGTTACCTTTATATTCTTTACACTGTA---------------TGG------TTA---GGTGAAGTTGCTCAGTTAGCTGAAGCA------AGT---AAGTCTGATGTAGTA---AAA---AGA---GGT---GTA---AGA---ACACTA---GCATGGTTTGTATTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTKA---A--GATK-SL------------LWK-LIIASTWMLVCGYIGE---A------M--SD-----------G------S---T---------GHS------VQW-GVLSTLGYLYILYTV-----W--L-GEVAQLAEA--S-KSDVV-K-R-G-V-R-TL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929205 [unk-env1-c] PRGD_OTU087_ed3de6fd5c0c2c1bb4b9b511eca5e68a gb|KJ929205| PRGD_OTU087_ed3de6fd5c0c2c1bb4b9b511eca5e68a, putative proteorhodopsin gene, partial cds. PRGD_OTU087_ed3de6fd5c0c2c1bb4b9b511eca5e68a, putative proteorhodopsin gene, partial cds. KJ929205 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ACATTAACTGTACCACTTATGTGTGTAGAGTTTTATTTATTAACTAAAGCCGCTGGAGCTACAAGATCTCTATTGTGGAAGCTAATCATAGCATCTACATGGATGTTAGTGTGTGGTTACATTGGAGAAGCATTCTCAGATGGAACAACTGGACATTCAGTACAATGGGGTGTACTTTCAACTCTAGGTTACCTATATATCTTACACTGTGTATGGCTTGGTGAGGTTGCTCAACTAGCTGACTCTAGTGGATCAGATGTTGTTAAAAAAGGTGTTAGAGCCTTAGCATGGTTTGTACTAGTA TLTVPLMCVEFYLLTKAAGATRSLLWKLIIASTWMLVCGYIGEAFSDGTTGHSVQWGVLSTLGYLYILHCVWLGEVAQLADSSGSDVVKKGVRALAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATTAACTGTACCACTTATGTGTGTAGAGTTTTATTTATTAACTAAAGCC---------GCT------GGAGCTACAAGA---TCTCTA------------------------------------TTGTGGAAG---CTAATCATAGCATCTACATGGATGTTAGTGTGTGGTTACATTGGAGAA---------GCA------------------TTC------TCAGAT---------------------------------GGA------------------ACA---------ACT---------------------------GGACATTCA------------------GTACAATGG---GGTGTACTTTCAACTCTAGGTTACCTATATATCTTACACTGTGTA---------------TGG------CTT---GGTGAGGTTGCTCAACTAGCTGACTCT------AGT---GGATCAGATGTTGTT---AAA---AAA---GGT---GTT---AGA---GCCTTA---GCATGGTTTGTACTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTKA---A--GATR-SL------------LWK-LIIASTWMLVCGYIGE---A------F--SD-----------G------T---T---------GHS------VQW-GVLSTLGYLYILHCV-----W--L-GEVAQLADS--S-GSDVV-K-K-G-V-R-AL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929548 [unk-env1-c] PRGD_OTU150_4872a34e92fabf29baa546b80d4c30de gb|KJ929548| PRGD_OTU150_4872a34e92fabf29baa546b80d4c30de, putative proteorhodopsin gene, partial cds. PRGD_OTU150_4872a34e92fabf29baa546b80d4c30de, putative proteorhodopsin gene, partial cds. KJ929548 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683) ACGCTTACAGTGCCTTTAATGTGTGTAGAGTTTTATCTATTAACGAAAGCTGCAGGTGCTAAAATGGGCCTTTTATGGAAGTTAATTATTGCTTCTGTTTGGATGTTAGTTGCTGGCTACATAGGAGAAGCTATGTCAGATGGATCTACGGGACATTCTGTACAATGGGGTGTGATATCTACTTTAGGTTACTTGTATATTCTCTATACAGCATGGTTTGGCGAAGTAGCTAAATTAGCTGAAAATAGTGGAGACGCAGTAGTAAAGAAAGGAGTTCGTATTCTTGCTTGGTTTATCCTTGTA TLTVPLMCVEFYLLTKAAGAKMGLLWKLIIASVWMLVAGYIGEAMSDGSTGHSVQWGVISTLGYLYILYTAWFGEVAKLAENSGDAVVKKGVRILAWFILV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCTTACAGTGCCTTTAATGTGTGTAGAGTTTTATCTATTAACGAAAGCT---------GCA------GGTGCTAAAATG---GGCCTT------------------------------------TTATGGAAG---TTAATTATTGCTTCTGTTTGGATGTTAGTTGCTGGCTACATAGGAGAA---------GCT------------------ATG------TCAGAT---------------------------------GGA------------------TCT---------ACG---------------------------GGACATTCT------------------GTACAATGG---GGTGTGATATCTACTTTAGGTTACTTGTATATTCTCTATACAGCA---------------TGG------TTT---GGCGAAGTAGCTAAATTAGCTGAAAAT------AGT---GGAGACGCAGTAGTA---AAG---AAA---GGA---GTT---CGT---ATTCTT---GCTTGGTTTATCCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTKA---A--GAKM-GL------------LWK-LIIASVWMLVAGYIGE---A------M--SD-----------G------S---T---------GHS------VQW-GVISTLGYLYILYTA-----W--F-GEVAKLAEN--S-GDAVV-K-K-G-V-R-IL-AWFILV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929546 [unk-env1-c] PRGD_OTU150_otuREP_fe5fcf650288050b637fad319e115e62 gb|KJ929546| PRGD_OTU150_otuREP_fe5fcf650288050b637fad319e115e62, putative proteorhodopsin gene, partial cds. PRGD_OTU150_otuREP_fe5fcf650288050b637fad319e115e62, putative proteorhodopsin gene, partial cds. KJ929546 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 76.3333 14.8833 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; ; 67.49, -168.12), Indian Ocean (-14.48, 113.45) ACGCTTACAGTGCCTTTAATGTGTGTAGAGTTTTATCTATTAACGAAAGCTGCAGGTGCTAAATTGGGTCTTTTATGGAAGTTGATTATTGCTTCTGTTTGGATGTTAGTTGCTGGCTACATAGGAGAAGCTATGTCAGATGGAACTACGGGACATTCTGTACAATGGGGTGTGATATCTACTTTAGGTTACTTGTATATTCTATATACAGCATGGTTTGGCGAAGTAGCTAAATTAGCTGAAAATAGTGGAGACGCAGTAGTAAAGAAAGGAGTTCGTATTCTTGCTTGGTTTATCCTTGTA TLTVPLMCVEFYLLTKAAGAKLGLLWKLIIASVWMLVAGYIGEAMSDGTTGHSVQWGVISTLGYLYILYTAWFGEVAKLAENSGDAVVKKGVRILAWFILV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCTTACAGTGCCTTTAATGTGTGTAGAGTTTTATCTATTAACGAAAGCT---------GCA------GGTGCTAAATTG---GGTCTT------------------------------------TTATGGAAG---TTGATTATTGCTTCTGTTTGGATGTTAGTTGCTGGCTACATAGGAGAA---------GCT------------------ATG------TCAGAT---------------------------------GGA------------------ACT---------ACG---------------------------GGACATTCT------------------GTACAATGG---GGTGTGATATCTACTTTAGGTTACTTGTATATTCTATATACAGCA---------------TGG------TTT---GGCGAAGTAGCTAAATTAGCTGAAAAT------AGT---GGAGACGCAGTAGTA---AAG---AAA---GGA---GTT---CGT---ATTCTT---GCTTGGTTTATCCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTKA---A--GAKL-GL------------LWK-LIIASVWMLVAGYIGE---A------M--SD-----------G------T---T---------GHS------VQW-GVISTLGYLYILYTA-----W--F-GEVAKLAEN--S-GDAVV-K-K-G-V-R-IL-AWFILV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929547 [unk-env1-c] PRGD_OTU150_26b6b1b04da455662882e2a25d87825d gb|KJ929547| PRGD_OTU150_26b6b1b04da455662882e2a25d87825d, putative proteorhodopsin gene, partial cds. PRGD_OTU150_26b6b1b04da455662882e2a25d87825d, putative proteorhodopsin gene, partial cds. KJ929547 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 76.3333, 14.8833), English Channel (48.7717, -3.9683) ACGCTTACAGTGCCTTTAATGTGTGTAGAATTTTATCTATTAACGAAAGCTGCAGGTGCTAAAATGGGTCTTTTATGGAAGTTGATTATTGCTTCTGTTTGGATGTTAGTTGCTGGCTACATAGGAGAAGCTATGTCAGATGGAACTACGGGACATTCTGTACAGTGGGGTGTGATATCTACTTTAGGTTACTTGTATATTCTATATACAGCATGGTTTGGCGAAGTAGCTAAATTAGCTGAAAATAGTGGAGACGCAGTAGTAAAGAAAGGAGTTCGTATTCTTGCTTGGTTTATCCTTGTA TLTVPLMCVEFYLLTKAAGAKMGLLWKLIIASVWMLVAGYIGEAMSDGTTGHSVQWGVISTLGYLYILYTAWFGEVAKLAENSGDAVVKKGVRILAWFILV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCTTACAGTGCCTTTAATGTGTGTAGAATTTTATCTATTAACGAAAGCT---------GCA------GGTGCTAAAATG---GGTCTT------------------------------------TTATGGAAG---TTGATTATTGCTTCTGTTTGGATGTTAGTTGCTGGCTACATAGGAGAA---------GCT------------------ATG------TCAGAT---------------------------------GGA------------------ACT---------ACG---------------------------GGACATTCT------------------GTACAGTGG---GGTGTGATATCTACTTTAGGTTACTTGTATATTCTATATACAGCA---------------TGG------TTT---GGCGAAGTAGCTAAATTAGCTGAAAAT------AGT---GGAGACGCAGTAGTA---AAG---AAA---GGA---GTT---CGT---ATTCTT---GCTTGGTTTATCCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTKA---A--GAKM-GL------------LWK-LIIASVWMLVAGYIGE---A------M--SD-----------G------T---T---------GHS------VQW-GVISTLGYLYILYTA-----W--F-GEVAKLAEN--S-GDAVV-K-K-G-V-R-IL-AWFILV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929705 [unk-env1-c] PRGD_OTU204_e72d59eb51d44778e99c3574f987b107 gb|KJ929705| PRGD_OTU204_e72d59eb51d44778e99c3574f987b107, putative proteorhodopsin gene, partial cds. PRGD_OTU204_e72d59eb51d44778e99c3574f987b107, putative proteorhodopsin gene, partial cds. KJ929705 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ACATTGACTGTTCCATTAATGTGTGTTGAATTCTATCTTTTAACAAAAGCTGCAGGAGCAAAAATGAGTTTACTGTGGAAACTCATCGGAGCGTCCGTTTTAATGTTAGTAGCAGGATACATAGGTGAAGCATTCAATCCTGATGGTGGAAGCACCTCACATAGCGTTATTTGGGGTGTAATTTCTACTGTAGGCTACATCTATATTCTTTACACGGCATGGTTTGGAGAAGTTAAGCAACTCTCACTTAAATCAGATAACCCTCAAGTCGCCAAGGGAATAAATGTAATGGCTTGGTTCGTGTTGGTT TLTVPLMCVEFYLLTKAAGAKMSLLWKLIGASVLMLVAGYIGEAFNPDGGSTSHSVIWGVISTVGYIYILYTAWFGEVKQLSLKSDNPQVAKGINVMAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATTGACTGTTCCATTAATGTGTGTTGAATTCTATCTTTTAACAAAAGCT---------GCA------GGAGCAAAAATG---AGTTTA------------------------------------CTGTGGAAA---CTCATCGGAGCGTCCGTTTTAATGTTAGTAGCAGGATACATAGGTGAA---------GCA------------------TTC------AATCCT------------------------GATGGT---GGA------------------AGC---------ACC---------------------------TCACATAGC------------------GTTATTTGG---GGTGTAATTTCTACTGTAGGCTACATCTATATTCTTTACACGGCA---------------TGG------TTT---GGAGAAGTTAAGCAACTCTCACTTAAA------TCA---GATAACCCTCAAGTC---GCC---AAG---GGA---ATA---AAT---GTAATG---GCTTGGTTCGTGTTGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTKA---A--GAKM-SL------------LWK-LIGASVLMLVAGYIGE---A------F--NP--------DG-G------S---T---------SHS------VIW-GVISTVGYIYILYTA-----W--F-GEVKQLSLK--S-DNPQV-A-K-G-I-N-VM-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929704 [unk-env1-c] PRGD_OTU204_otuREP_7118cd36ab7d361033400ebccc02609d gb|KJ929704| PRGD_OTU204_otuREP_7118cd36ab7d361033400ebccc02609d, putative proteorhodopsin gene, partial cds. PRGD_OTU204_otuREP_7118cd36ab7d361033400ebccc02609d, putative proteorhodopsin gene, partial cds. KJ929704 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 29-nov-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ACGTTAACCGTGCCTTTGATGTGTGTTGAGTTTTACTTGCTTACAAAAGCAGCTGGTGCAAAACTCGGTTTGCTTTGGAAGTTGATCGGAGCATCAGTTTTGATGTTAGTTGCAGGTTACATCGGTGAGGCATTTAACCCTGAAGGTGGAAGCATGTCGCACTCAGTTTTCTGGGGCGTTGTTTCAACTATAGGTTATGTCTACATCCTTTATACTGCTTGGGCAGGAGAGGTAAAGAAATTGGCTGATCAATCAGACAATCCTCAAGTTGCCAAAGGAGTGAACATCATGGGTTGGTTTGTTCTTGTA TLTVPLMCVEFYLLTKAAGAKLGLLWKLIGASVLMLVAGYIGEAFNPEGGSMSHSVFWGVVSTIGYVYILYTAWAGEVKKLADQSDNPQVAKGVNIMGWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGTTAACCGTGCCTTTGATGTGTGTTGAGTTTTACTTGCTTACAAAAGCA---------GCT------GGTGCAAAACTC---GGTTTG------------------------------------CTTTGGAAG---TTGATCGGAGCATCAGTTTTGATGTTAGTTGCAGGTTACATCGGTGAG---------GCA------------------TTT------AACCCT------------------------GAAGGT---GGA------------------AGC---------ATG---------------------------TCGCACTCA------------------GTTTTCTGG---GGCGTTGTTTCAACTATAGGTTATGTCTACATCCTTTATACTGCT---------------TGG------GCA---GGAGAGGTAAAGAAATTGGCTGATCAA------TCA---GACAATCCTCAAGTT---GCC---AAA---GGA---GTG---AAC---ATCATG---GGTTGGTTTGTTCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTKA---A--GAKL-GL------------LWK-LIGASVLMLVAGYIGE---A------F--NP--------EG-G------S---M---------SHS------VFW-GVVSTIGYVYILYTA-----W--A-GEVKKLADQ--S-DNPQV-A-K-G-V-N-IM-GWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929716 [unk-env1-c] PRGD_OTU210_otuREP_098a921fb6cb26a99c1d57f2de4bd4e9 gb|KJ929716| PRGD_OTU210_otuREP_098a921fb6cb26a99c1d57f2de4bd4e9, putative proteorhodopsin gene, partial cds. PRGD_OTU210_otuREP_098a921fb6cb26a99c1d57f2de4bd4e9, putative proteorhodopsin gene, partial cds. KJ929716 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185) ACGCTTACTGTTCCTTTAATGTGTGTGGAATTCTACTTATTGACTAAAGCTGCAGGCGCAAAATTGTCGCTTCTTTGGAAATTGATCATAGCGTCTGTTTGGATGTTAGTAGCAGGATACATTGGTGAAGCATTTAATCCAGAAGGTGGAGATTCTACCCATTCTGTATTATGGGGTTTCATTTCAACATTAGGATATCTCTACATACTCTACACAGCATGGTTTGGTGAGGTAGCGCAATTGGCTGCTGCATCAGATAATGAAGTGGTGAAGCGCGGTGTGCGCATTCTAGCCTGGTTTGTCTTGGTA TLTVPLMCVEFYLLTKAAGAKLSLLWKLIIASVWMLVAGYIGEAFNPEGGDSTHSVLWGFISTLGYLYILYTAWFGEVAQLAAASDNEVVKRGVRILAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCTTACTGTTCCTTTAATGTGTGTGGAATTCTACTTATTGACTAAAGCT---------GCA------GGCGCAAAATTG---TCGCTT------------------------------------CTTTGGAAA---TTGATCATAGCGTCTGTTTGGATGTTAGTAGCAGGATACATTGGTGAA---------GCA------------------TTT------AATCCA------------------------GAAGGT---GGA------------------GAT---------TCT---------------------------ACCCATTCT------------------GTATTATGG---GGTTTCATTTCAACATTAGGATATCTCTACATACTCTACACAGCA---------------TGG------TTT---GGTGAGGTAGCGCAATTGGCTGCTGCA------TCA---GATAATGAAGTGGTG---AAG---CGC---GGT---GTG---CGC---ATTCTA---GCCTGGTTTGTCTTGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTKA---A--GAKL-SL------------LWK-LIIASVWMLVAGYIGE---A------F--NP--------EG-G------D---S---------THS------VLW-GFISTLGYLYILYTA-----W--F-GEVAQLAAA--S-DNEVV-K-R-G-V-R-IL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ928987 [unk-env1-c] PRGD_OTU066_1c7ea93ca933336b8796f6bb216ddec0 gb|KJ928987| PRGD_OTU066_1c7ea93ca933336b8796f6bb216ddec0, putative proteorhodopsin gene, partial cds. PRGD_OTU066_1c7ea93ca933336b8796f6bb216ddec0, putative proteorhodopsin gene, partial cds. KJ928987 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -11.7527, -134.0937), Indian Ocean (-14.48, 113.45) ATTTTAACTGTTCCATTAATGTGTGTTGAATTCTACCTTCTAACTAGACTAGCTGGTGCTACAAAAGCATTACTTTGGAAGCTTATTTTTGCCTCTACGTGGATGTTAGTTGCAGGTTATATTGGTGAAGCATTTAGCGATGGTAGTACATCCCATTCAGTAACTTGGGGGGTAATTTCTACTGTAGGTTATCTTTATGTTCTATACACCGCTTGGTTTGGAGAAGTAGCTCAGCTTGCTGCTAACAGTAAATCTGAAGTTATTGAGAAAGGAGTTAGAGCGTTAGCATGGTTTGTACTTGTA ILTVPLMCVEFYLLTRLAGATKALLWKLIFASTWMLVAGYIGEAFSDGSTSHSVTWGVISTVGYLYVLYTAWFGEVAQLAANSKSEVIEKGVRALAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACTGTTCCATTAATGTGTGTTGAATTCTACCTTCTAACTAGACTA---------GCT------GGTGCTACAAAA---GCATTA------------------------------------CTTTGGAAG---CTTATTTTTGCCTCTACGTGGATGTTAGTTGCAGGTTATATTGGTGAA---------GCA------------------TTT------AGCGAT---------------------------------GGT------------------AGT---------ACA---------------------------TCCCATTCA------------------GTAACTTGG---GGGGTAATTTCTACTGTAGGTTATCTTTATGTTCTATACACCGCT---------------TGG------TTT---GGAGAAGTAGCTCAGCTTGCTGCTAAC------AGT---AAATCTGAAGTTATT---GAG---AAA---GGA---GTT---AGA---GCGTTA---GCATGGTTTGTACTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLTRL---A--GATK-AL------------LWK-LIFASTWMLVAGYIGE---A------F--SD-----------G------S---T---------SHS------VTW-GVISTVGYLYVLYTA-----W--F-GEVAQLAAN--S-KSEVI-E-K-G-V-R-AL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ928993 [unk-env1-c] PRGD_OTU066_870b1ecf4384361058c0ffd3f1559d49 gb|KJ928993| PRGD_OTU066_870b1ecf4384361058c0ffd3f1559d49, putative proteorhodopsin gene, partial cds. PRGD_OTU066_870b1ecf4384361058c0ffd3f1559d49, putative proteorhodopsin gene, partial cds. KJ928993 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTTTAACGGTCCCATTAATGTGCGTTGAATTCTACCTTCTAACAAGACTAGCTGGTGCTACCAAAGCATTACTTTGGAAGCTTATTTTTGCCTCTACGTGGATGTTAGTTGCAGGTTACATTGGCGAAGCATTTAGCGACGGCAGTACATCCCATTCAGTGACTTGGGGGGTGATTTCTACTGTAGGGTATCTTTATGTTCTATACACAGCCTGGTTTGGAGAAGTAGCTCAACTTGCTGCTAACAGTAAATCTGAAGTTATTGAGAAAGGAGTTAGAGCATTAGCATGGTTTGTGCTTGTA ILTVPLMCVEFYLLTRLAGATKALLWKLIFASTWMLVAGYIGEAFSDGSTSHSVTWGVISTVGYLYVLYTAWFGEVAQLAANSKSEVIEKGVRALAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACGGTCCCATTAATGTGCGTTGAATTCTACCTTCTAACAAGACTA---------GCT------GGTGCTACCAAA---GCATTA------------------------------------CTTTGGAAG---CTTATTTTTGCCTCTACGTGGATGTTAGTTGCAGGTTACATTGGCGAA---------GCA------------------TTT------AGCGAC---------------------------------GGC------------------AGT---------ACA---------------------------TCCCATTCA------------------GTGACTTGG---GGGGTGATTTCTACTGTAGGGTATCTTTATGTTCTATACACAGCC---------------TGG------TTT---GGAGAAGTAGCTCAACTTGCTGCTAAC------AGT---AAATCTGAAGTTATT---GAG---AAA---GGA---GTT---AGA---GCATTA---GCATGGTTTGTGCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLTRL---A--GATK-AL------------LWK-LIFASTWMLVAGYIGE---A------F--SD-----------G------S---T---------SHS------VTW-GVISTVGYLYVLYTA-----W--F-GEVAQLAAN--S-KSEVI-E-K-G-V-R-AL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ928986 [unk-env1-c] PRGD_OTU066_otuREP_b049655f34180d86a70eeef7c1523522 gb|KJ928986| PRGD_OTU066_otuREP_b049655f34180d86a70eeef7c1523522, putative proteorhodopsin gene, partial cds. PRGD_OTU066_otuREP_b049655f34180d86a70eeef7c1523522, putative proteorhodopsin gene, partial cds. KJ928986 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 16-sept-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-11.7527, -134.0937), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) ATTTTAACGGTTCCATTAATGTGTGTTGAATTCTACCTACTAACTAGACTAGCTGGTGCTACAAAAGCATTACTTTGGAAGCTTATTCTTGCCTCTACATGGATGTTAGTTGCAGGTTATATTGGTGAAGCATTTAGCGACGGTAGTACATCCCATTCAGTAACTTGGGGGGTAATTTCTACTGTAGGTTATCTTTATGTTCTATACACCGCTTGGTTTGGAGAAGTAGCTCAGCTTGCTGCTAACAGTAAATCTGAAGTTATTGAGAAAGGAGTTAGAGCATTAGCATGGTTTGTGCTTGTG ILTVPLMCVEFYLLTRLAGATKALLWKLILASTWMLVAGYIGEAFSDGSTSHSVTWGVISTVGYLYVLYTAWFGEVAQLAANSKSEVIEKGVRALAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACGGTTCCATTAATGTGTGTTGAATTCTACCTACTAACTAGACTA---------GCT------GGTGCTACAAAA---GCATTA------------------------------------CTTTGGAAG---CTTATTCTTGCCTCTACATGGATGTTAGTTGCAGGTTATATTGGTGAA---------GCA------------------TTT------AGCGAC---------------------------------GGT------------------AGT---------ACA---------------------------TCCCATTCA------------------GTAACTTGG---GGGGTAATTTCTACTGTAGGTTATCTTTATGTTCTATACACCGCT---------------TGG------TTT---GGAGAAGTAGCTCAGCTTGCTGCTAAC------AGT---AAATCTGAAGTTATT---GAG---AAA---GGA---GTT---AGA---GCATTA---GCATGGTTTGTGCTTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLTRL---A--GATK-AL------------LWK-LILASTWMLVAGYIGE---A------F--SD-----------G------S---T---------SHS------VTW-GVISTVGYLYVLYTA-----W--F-GEVAQLAAN--S-KSEVI-E-K-G-V-R-AL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ928996 [unk-env1-c] PRGD_OTU066_e52bc6fa89e23a6ca66c1e7edc6c4a07 gb|KJ928996| PRGD_OTU066_e52bc6fa89e23a6ca66c1e7edc6c4a07, putative proteorhodopsin gene, partial cds. PRGD_OTU066_e52bc6fa89e23a6ca66c1e7edc6c4a07, putative proteorhodopsin gene, partial cds. KJ928996 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 01-juil-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTTTAACGGTCCCATTAATGTGTGTTGAGTTCTACCTACTAACTAGACTAGCTGGTGCTAAAAAAGCTTTACTTTGGAAGCTTATTCTTGCCTCTACATGGATGTTAGTTGCAGGTTATATTGGTGAAGCATTTAGCGACGGTAGTACATCCCATTCAGTAACTTGGGGGGTAATCTCTACTGTAGGTTATCTTTATGTTCTATACACCGCTTGGTTTGGAGAAGTAGCTCAGCTTGCTGCTAACAGTAAATCTGAAGCTATTGAGAAAGGAGTTAGAGCATTAGCATGGTTTGTGCTTGTG ILTVPLMCVEFYLLTRLAGAKKALLWKLILASTWMLVAGYIGEAFSDGSTSHSVTWGVISTVGYLYVLYTAWFGEVAQLAANSKSEAIEKGVRALAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACGGTCCCATTAATGTGTGTTGAGTTCTACCTACTAACTAGACTA---------GCT------GGTGCTAAAAAA---GCTTTA------------------------------------CTTTGGAAG---CTTATTCTTGCCTCTACATGGATGTTAGTTGCAGGTTATATTGGTGAA---------GCA------------------TTT------AGCGAC---------------------------------GGT------------------AGT---------ACA---------------------------TCCCATTCA------------------GTAACTTGG---GGGGTAATCTCTACTGTAGGTTATCTTTATGTTCTATACACCGCT---------------TGG------TTT---GGAGAAGTAGCTCAGCTTGCTGCTAAC------AGT---AAATCTGAAGCTATT---GAG---AAA---GGA---GTT---AGA---GCATTA---GCATGGTTTGTGCTTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLTRL---A--GAKK-AL------------LWK-LILASTWMLVAGYIGE---A------F--SD-----------G------S---T---------SHS------VTW-GVISTVGYLYVLYTA-----W--F-GEVAQLAAN--S-KSEAI-E-K-G-V-R-AL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ928995 [unk-env1-c] PRGD_OTU066_ca5884d3148209d1c3f1b91f4242f169 gb|KJ928995| PRGD_OTU066_ca5884d3148209d1c3f1b91f4242f169, putative proteorhodopsin gene, partial cds. PRGD_OTU066_ca5884d3148209d1c3f1b91f4242f169, putative proteorhodopsin gene, partial cds. KJ928995 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTTTAACGGTTCCATTAATGTGTGTTGAATTCTACCTACTAACTAGACTAGCTGGCGCTACAAAAGCATTACTTTGGAAGCTTATTTTTGCCTCTACATGGATGTTAGTTGCAGGTTATATTGGTGAAGCATTTAGCGACGGTAGTACATCCCATTCAGTAACTTGGGGGGTAATTTCTACTGTAGGTTATCTTTATGTTCTATACACTGCTTGGTTTGGAGAAGTAGCTCAGCTTGCTGCTAACAGTAAATCTGAAGTTATTGAGAAAGGAGTTAGAGCATTAGCATGGTTTGTGCTTGTA ILTVPLMCVEFYLLTRLAGATKALLWKLIFASTWMLVAGYIGEAFSDGSTSHSVTWGVISTVGYLYVLYTAWFGEVAQLAANSKSEVIEKGVRALAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACGGTTCCATTAATGTGTGTTGAATTCTACCTACTAACTAGACTA---------GCT------GGCGCTACAAAA---GCATTA------------------------------------CTTTGGAAG---CTTATTTTTGCCTCTACATGGATGTTAGTTGCAGGTTATATTGGTGAA---------GCA------------------TTT------AGCGAC---------------------------------GGT------------------AGT---------ACA---------------------------TCCCATTCA------------------GTAACTTGG---GGGGTAATTTCTACTGTAGGTTATCTTTATGTTCTATACACTGCT---------------TGG------TTT---GGAGAAGTAGCTCAGCTTGCTGCTAAC------AGT---AAATCTGAAGTTATT---GAG---AAA---GGA---GTT---AGA---GCATTA---GCATGGTTTGTGCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLTRL---A--GATK-AL------------LWK-LIFASTWMLVAGYIGE---A------F--SD-----------G------S---T---------SHS------VTW-GVISTVGYLYVLYTA-----W--F-GEVAQLAAN--S-KSEVI-E-K-G-V-R-AL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ928991 [unk-env1-c] PRGD_OTU066_3f6360dfec1d00f193f1c043fb23490e gb|KJ928991| PRGD_OTU066_3f6360dfec1d00f193f1c043fb23490e, putative proteorhodopsin gene, partial cds. PRGD_OTU066_3f6360dfec1d00f193f1c043fb23490e, putative proteorhodopsin gene, partial cds. KJ928991 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 38.6308 7.9097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097; 33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45; -33.28, 45.35) ATTTTAACGGTTCCATTAATGTGTGTTGAATTTTATCTACTAACTAGACTAGCTGGTGCTACAAAAGCATTACTTTGGAAGCTTATTTTTGCCTCTACATGGATGTTAGTTGCAGGTTATATTGGTGAAGCATTTAGCGACGGTAGTACATCCCATTCAGTAACTTGGGGAGTAATTTCCACTGTAGGTTATCTTTATGTTCTATACACCGCCTGGTTTGGAGAAGTAGCTCAGCTTGCTGCTAACAGTAAATCTGAAGTTATTGAGAAAGGAGTTAGAGCATTAGCTTGGTTTGTGCTTGTA ILTVPLMCVEFYLLTRLAGATKALLWKLIFASTWMLVAGYIGEAFSDGSTSHSVTWGVISTVGYLYVLYTAWFGEVAQLAANSKSEVIEKGVRALAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACGGTTCCATTAATGTGTGTTGAATTTTATCTACTAACTAGACTA---------GCT------GGTGCTACAAAA---GCATTA------------------------------------CTTTGGAAG---CTTATTTTTGCCTCTACATGGATGTTAGTTGCAGGTTATATTGGTGAA---------GCA------------------TTT------AGCGAC---------------------------------GGT------------------AGT---------ACA---------------------------TCCCATTCA------------------GTAACTTGG---GGAGTAATTTCCACTGTAGGTTATCTTTATGTTCTATACACCGCC---------------TGG------TTT---GGAGAAGTAGCTCAGCTTGCTGCTAAC------AGT---AAATCTGAAGTTATT---GAG---AAA---GGA---GTT---AGA---GCATTA---GCTTGGTTTGTGCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLTRL---A--GATK-AL------------LWK-LIFASTWMLVAGYIGE---A------F--SD-----------G------S---T---------SHS------VTW-GVISTVGYLYVLYTA-----W--F-GEVAQLAAN--S-KSEVI-E-K-G-V-R-AL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ928992 [unk-env1-c] PRGD_OTU066_6dc6e839bd4ab85c8fb083cc08c78987 gb|KJ928992| PRGD_OTU066_6dc6e839bd4ab85c8fb083cc08c78987, putative proteorhodopsin gene, partial cds. PRGD_OTU066_6dc6e839bd4ab85c8fb083cc08c78987, putative proteorhodopsin gene, partial cds. KJ928992 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -30.0264 -98.3884 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Arctic Ocean-Atlantic side (76.3333, 14.8833) ATTTTAACGGTTCCATTAATGTGTGTTGAATTTTACCTACTAACTAGACTAGCTGGTGCTACAAAATCATTACTTTGGAAGCTTATTTTTGCTTCTACATGGATGTTAGTTGCAGGTTATATTGGTGAAGCATTTAGCGACGGTAGTACATCTCATTCAGTAACTTGGGGAGTAATTTCTACTCTAGGTTATCTTTATGTTCTATATACCGCCTGGTTTGGAGAAGTAGCTCAACTAGCTGCTAACAGTAAATCTGAAGTTATTGAGAAAGGAGTTAGAGCATTGGCTTGGTTTGTCCTTGTA ILTVPLMCVEFYLLTRLAGATKSLLWKLIFASTWMLVAGYIGEAFSDGSTSHSVTWGVISTLGYLYVLYTAWFGEVAQLAANSKSEVIEKGVRALAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACGGTTCCATTAATGTGTGTTGAATTTTACCTACTAACTAGACTA---------GCT------GGTGCTACAAAA---TCATTA------------------------------------CTTTGGAAG---CTTATTTTTGCTTCTACATGGATGTTAGTTGCAGGTTATATTGGTGAA---------GCA------------------TTT------AGCGAC---------------------------------GGT------------------AGT---------ACA---------------------------TCTCATTCA------------------GTAACTTGG---GGAGTAATTTCTACTCTAGGTTATCTTTATGTTCTATATACCGCC---------------TGG------TTT---GGAGAAGTAGCTCAACTAGCTGCTAAC------AGT---AAATCTGAAGTTATT---GAG---AAA---GGA---GTT---AGA---GCATTG---GCTTGGTTTGTCCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLTRL---A--GATK-SL------------LWK-LIFASTWMLVAGYIGE---A------F--SD-----------G------S---T---------SHS------VTW-GVISTLGYLYVLYTA-----W--F-GEVAQLAAN--S-KSEVI-E-K-G-V-R-AL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ928990 [unk-env1-c] PRGD_OTU066_31800b6da0aab0934a83ec6b209ecc09 gb|KJ928990| PRGD_OTU066_31800b6da0aab0934a83ec6b209ecc09, putative proteorhodopsin gene, partial cds. PRGD_OTU066_31800b6da0aab0934a83ec6b209ecc09, putative proteorhodopsin gene, partial cds. KJ928990 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATCTTAACAGTTCCATTAATGTGTGTTGAATTTTACCTACTAACTAGATTAGCCGGTGCAACAAAATCATTACTTTGGAAACTTATTTTTGCATCTACATGGATGTTAGTTGCAGGGTATATTGGTGAAGCATTTAGCGACGGTAGTACATCCCATTCAGTAACTTGGGGGGTAATTTCTACTGTAGGTTATCTTTATGTTCTATATACCGCTTGGTTTGGGGAAGTAGCTCAGCTTGCTGCCAACAGTAAATCTGAGGTTATTGAAAAAGGAGTTAGAGCGCTAGCATGGTTTGTGCTTGTA ILTVPLMCVEFYLLTRLAGATKSLLWKLIFASTWMLVAGYIGEAFSDGSTSHSVTWGVISTVGYLYVLYTAWFGEVAQLAANSKSEVIEKGVRALAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAACAGTTCCATTAATGTGTGTTGAATTTTACCTACTAACTAGATTA---------GCC------GGTGCAACAAAA---TCATTA------------------------------------CTTTGGAAA---CTTATTTTTGCATCTACATGGATGTTAGTTGCAGGGTATATTGGTGAA---------GCA------------------TTT------AGCGAC---------------------------------GGT------------------AGT---------ACA---------------------------TCCCATTCA------------------GTAACTTGG---GGGGTAATTTCTACTGTAGGTTATCTTTATGTTCTATATACCGCT---------------TGG------TTT---GGGGAAGTAGCTCAGCTTGCTGCCAAC------AGT---AAATCTGAGGTTATT---GAA---AAA---GGA---GTT---AGA---GCGCTA---GCATGGTTTGTGCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLTRL---A--GATK-SL------------LWK-LIFASTWMLVAGYIGE---A------F--SD-----------G------S---T---------SHS------VTW-GVISTVGYLYVLYTA-----W--F-GEVAQLAAN--S-KSEVI-E-K-G-V-R-AL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ928989 [unk-env1-c] PRGD_OTU066_2bc2d105f11cd1d153ded48b93f925a8 gb|KJ928989| PRGD_OTU066_2bc2d105f11cd1d153ded48b93f925a8, putative proteorhodopsin gene, partial cds. PRGD_OTU066_2bc2d105f11cd1d153ded48b93f925a8, putative proteorhodopsin gene, partial cds. KJ928989 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTCTAACAGTTCCATTAATGTGTGTTGAATTTTACCTACTAACTAGACTAGCAGGTGCTACAAAATCATTACTTTGGAAACTTATTTTTGCATCTACATGGATGTTAGTTGCAGGTTATATTGGTGAAGCATTTAGCGATGGCAGTACATCCCACTCAGTTACTTGGGGGGTAATTTCTACTGTAGGTTATCTTTATGTTCTATACACCGCCTGGTTTGGTGAAGTAGCTCAGCTTGCTGCTAACAGTAAATCTGAAGTTATTGAAAAAGGAGTTAGAGCATTAGCATGGTTTGTGCTTGTA ILTVPLMCVEFYLLTRLAGATKSLLWKLIFASTWMLVAGYIGEAFSDGSTSHSVTWGVISTVGYLYVLYTAWFGEVAQLAANSKSEVIEKGVRALAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTAACAGTTCCATTAATGTGTGTTGAATTTTACCTACTAACTAGACTA---------GCA------GGTGCTACAAAA---TCATTA------------------------------------CTTTGGAAA---CTTATTTTTGCATCTACATGGATGTTAGTTGCAGGTTATATTGGTGAA---------GCA------------------TTT------AGCGAT---------------------------------GGC------------------AGT---------ACA---------------------------TCCCACTCA------------------GTTACTTGG---GGGGTAATTTCTACTGTAGGTTATCTTTATGTTCTATACACCGCC---------------TGG------TTT---GGTGAAGTAGCTCAGCTTGCTGCTAAC------AGT---AAATCTGAAGTTATT---GAA---AAA---GGA---GTT---AGA---GCATTA---GCATGGTTTGTGCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLTRL---A--GATK-SL------------LWK-LIFASTWMLVAGYIGE---A------F--SD-----------G------S---T---------SHS------VTW-GVISTVGYLYVLYTA-----W--F-GEVAQLAAN--S-KSEVI-E-K-G-V-R-AL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ928998 [unk-env1-c] PRGD_OTU066_f24354ac5f393bc865b9cf26581d1edb gb|KJ928998| PRGD_OTU066_f24354ac5f393bc865b9cf26581d1edb, putative proteorhodopsin gene, partial cds. PRGD_OTU066_f24354ac5f393bc865b9cf26581d1edb, putative proteorhodopsin gene, partial cds. KJ928998 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) ATTTTAACAGTTCCATTAATGTGTGTTGAATTTTACCTACTAACTAGACTAGCAGGTGCTACAAAATCATTACTTTGGAAACTTATTTTTGCATCTACATGGATGTTAGTTGCAGGTTATATTGGTGAAGCATTTAGCGATGGCAGTACATCCCATTCAGTTACTTGGGGGGTAATTTCTACTGTAGGTTATCTTTATGTTCTTTACACCGCCTGGTTTGGTGAAGTAGCTCAGCTTGCTGCTAACAGTAAATCTGAAGTTATTGAAAAAGGAGTAAGAGCATTAGCATGGTTTGTGCTTGTA ILTVPLMCVEFYLLTRLAGATKSLLWKLIFASTWMLVAGYIGEAFSDGSTSHSVTWGVISTVGYLYVLYTAWFGEVAQLAANSKSEVIEKGVRALAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACAGTTCCATTAATGTGTGTTGAATTTTACCTACTAACTAGACTA---------GCA------GGTGCTACAAAA---TCATTA------------------------------------CTTTGGAAA---CTTATTTTTGCATCTACATGGATGTTAGTTGCAGGTTATATTGGTGAA---------GCA------------------TTT------AGCGAT---------------------------------GGC------------------AGT---------ACA---------------------------TCCCATTCA------------------GTTACTTGG---GGGGTAATTTCTACTGTAGGTTATCTTTATGTTCTTTACACCGCC---------------TGG------TTT---GGTGAAGTAGCTCAGCTTGCTGCTAAC------AGT---AAATCTGAAGTTATT---GAA---AAA---GGA---GTA---AGA---GCATTA---GCATGGTTTGTGCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLTRL---A--GATK-SL------------LWK-LIFASTWMLVAGYIGE---A------F--SD-----------G------S---T---------SHS------VTW-GVISTVGYLYVLYTA-----W--F-GEVAQLAAN--S-KSEVI-E-K-G-V-R-AL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ928994 [unk-env1-c] PRGD_OTU066_a13c68257cad02ea5cd530b2be5afc8f gb|KJ928994| PRGD_OTU066_a13c68257cad02ea5cd530b2be5afc8f, putative proteorhodopsin gene, partial cds. PRGD_OTU066_a13c68257cad02ea5cd530b2be5afc8f, putative proteorhodopsin gene, partial cds. KJ928994 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTTTAACAGTTCCATTAATGTGTGTTGAATTTTACCTACTAACTAGACTAGCAGGTGCTACAAAATCATTACTTTGGAAACTTATTTTTGCATCTACATGGATGTTAGTTGCAGGTTATATTGGTGAAGCATTTAGCGATGGTAGTACATCCCATTCAGTTACTTGGGGGGTAATTTCTACTGTAGGTTATCTTTATGTTCTATACACCGCCTGGTTTGGTGAAGTAGCTCAACTTGCTGCTAACAGTAAATCTGAAGTTATTGAAAAAGGAGTCAGAGCATTAGCATGGTTTGTTCTTGTA ILTVPLMCVEFYLLTRLAGATKSLLWKLIFASTWMLVAGYIGEAFSDGSTSHSVTWGVISTVGYLYVLYTAWFGEVAQLAANSKSEVIEKGVRALAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACAGTTCCATTAATGTGTGTTGAATTTTACCTACTAACTAGACTA---------GCA------GGTGCTACAAAA---TCATTA------------------------------------CTTTGGAAA---CTTATTTTTGCATCTACATGGATGTTAGTTGCAGGTTATATTGGTGAA---------GCA------------------TTT------AGCGAT---------------------------------GGT------------------AGT---------ACA---------------------------TCCCATTCA------------------GTTACTTGG---GGGGTAATTTCTACTGTAGGTTATCTTTATGTTCTATACACCGCC---------------TGG------TTT---GGTGAAGTAGCTCAACTTGCTGCTAAC------AGT---AAATCTGAAGTTATT---GAA---AAA---GGA---GTC---AGA---GCATTA---GCATGGTTTGTTCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLTRL---A--GATK-SL------------LWK-LIFASTWMLVAGYIGE---A------F--SD-----------G------S---T---------SHS------VTW-GVISTVGYLYVLYTA-----W--F-GEVAQLAAN--S-KSEVI-E-K-G-V-R-AL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ928988 [unk-env1-c] PRGD_OTU066_244b1f6d2fde4b2de0063d13dba6cd58 gb|KJ928988| PRGD_OTU066_244b1f6d2fde4b2de0063d13dba6cd58, putative proteorhodopsin gene, partial cds. PRGD_OTU066_244b1f6d2fde4b2de0063d13dba6cd58, putative proteorhodopsin gene, partial cds. KJ928988 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATCTTAACAGTTCCGTTAATGTGTGTTGAATTTTATCTTTTAACTAGACTTGCAGGTGCAACTAAAACATTACTTTGGAAGCTTATTATCGCATCTACATGGATGTTAGTTGCTGGATATATTGGAGAAGCGTTTAGTGATGGTAGTACATCTCATTCAGTAACTTGGGGAGTATTATCTACTGTTGGTTACTTATATGTATTGTATACAGCATGGTTTGGAGAAGTTGCTCAATTAGCTGCTAACAGTAAGTCTGATGTAATCCAAAAAGGTGTGAAGGCTTTAGCTTGGTTTGTTCTTGTT ILTVPLMCVEFYLLTRLAGATKTLLWKLIIASTWMLVAGYIGEAFSDGSTSHSVTWGVLSTVGYLYVLYTAWFGEVAQLAANSKSDVIQKGVKALAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAACAGTTCCGTTAATGTGTGTTGAATTTTATCTTTTAACTAGACTT---------GCA------GGTGCAACTAAA---ACATTA------------------------------------CTTTGGAAG---CTTATTATCGCATCTACATGGATGTTAGTTGCTGGATATATTGGAGAA---------GCG------------------TTT------AGTGAT---------------------------------GGT------------------AGT---------ACA---------------------------TCTCATTCA------------------GTAACTTGG---GGAGTATTATCTACTGTTGGTTACTTATATGTATTGTATACAGCA---------------TGG------TTT---GGAGAAGTTGCTCAATTAGCTGCTAAC------AGT---AAGTCTGATGTAATC---CAA---AAA---GGT---GTG---AAG---GCTTTA---GCTTGGTTTGTTCTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLTRL---A--GATK-TL------------LWK-LIIASTWMLVAGYIGE---A------F--SD-----------G------S---T---------SHS------VTW-GVLSTVGYLYVLYTA-----W--F-GEVAQLAAN--S-KSDVI-Q-K-G-V-K-AL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ928997 [unk-env1-c] PRGD_OTU066_eabecbe841ef66407610d02529d8d7a3 gb|KJ928997| PRGD_OTU066_eabecbe841ef66407610d02529d8d7a3, putative proteorhodopsin gene, partial cds. PRGD_OTU066_eabecbe841ef66407610d02529d8d7a3, putative proteorhodopsin gene, partial cds. KJ928997 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) ATCCTAACAGTTCCTCTTATGTGTGTAGAATTTTATCTTTTAACTAGACTTGCAGGAGCAACCAAAACATTACTTTGGAAGCTAATAATTGCATCTACTTGGATGTTAGTTGCAGGATATATTGGTGAAGCGTTTAGTGACGGAAGCACTTCTCATTCTGTTACTTGGGGTGTATTGTCTACTGTAGGTTATTTGTATGTATTATATACTGCATGGTTTGGTGAAGTTGCACAATTAGCTGCAAATAGTAAATCTGAAGTTATTCAGAAAGGTGTAAAAGCATTAGCATGGTTTGTTTTAGTA ILTVPLMCVEFYLLTRLAGATKTLLWKLIIASTWMLVAGYIGEAFSDGSTSHSVTWGVLSTVGYLYVLYTAWFGEVAQLAANSKSEVIQKGVKALAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCTAACAGTTCCTCTTATGTGTGTAGAATTTTATCTTTTAACTAGACTT---------GCA------GGAGCAACCAAA---ACATTA------------------------------------CTTTGGAAG---CTAATAATTGCATCTACTTGGATGTTAGTTGCAGGATATATTGGTGAA---------GCG------------------TTT------AGTGAC---------------------------------GGA------------------AGC---------ACT---------------------------TCTCATTCT------------------GTTACTTGG---GGTGTATTGTCTACTGTAGGTTATTTGTATGTATTATATACTGCA---------------TGG------TTT---GGTGAAGTTGCACAATTAGCTGCAAAT------AGT---AAATCTGAAGTTATT---CAG---AAA---GGT---GTA---AAA---GCATTA---GCATGGTTTGTTTTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLTRL---A--GATK-TL------------LWK-LIIASTWMLVAGYIGE---A------F--SD-----------G------S---T---------SHS------VTW-GVLSTVGYLYVLYTA-----W--F-GEVAQLAAN--S-KSEVI-Q-K-G-V-K-AL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929413 [unk-env1-c] PRGD_OTU120_2261e2328da9fbf638b70f0ab98ea0f5 gb|KJ929413| PRGD_OTU120_2261e2328da9fbf638b70f0ab98ea0f5, putative proteorhodopsin gene, partial cds. PRGD_OTU120_2261e2328da9fbf638b70f0ab98ea0f5, putative proteorhodopsin gene, partial cds. KJ929413 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATATTAACTGTGCCGCTTATGTGCGTAGAATTCTATCTATTAACAAAACTAGCAGGAGCTACTAAGAAATTATTATGGAAGTTAATATTTGCATCAACTTGGATGCTTGTTTGTGGCTACATTGGAGAAGCATTTAACCCTGGAGGTGCTGATGCAACTAGTCATTCTGTAACCTGGGGTATATTATCAACTCTTGGTTATTTATATATTCTTTATACTGCTTGGATAGGTGAAGTTGCAGTGTTAGCTGAAAAAAGCAACTCTGAGACAATTAAGAAAGGAGTTCGTTCATTAGCTTGGTTTGTTTTAGTA ILTVPLMCVEFYLLTKLAGATKKLLWKLIFASTWMLVCGYIGEAFNPGGADATSHSVTWGILSTLGYLYILYTAWIGEVAVLAEKSNSETIKKGVRSLAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTAACTGTGCCGCTTATGTGCGTAGAATTCTATCTATTAACAAAACTA---------GCA------GGAGCTACTAAG---AAATTA------------------------------------TTATGGAAG---TTAATATTTGCATCAACTTGGATGCTTGTTTGTGGCTACATTGGAGAA---------GCA------------------TTT------AACCCT------------------------GGAGGTGCTGAT------------------GCA---------ACT---------------------------AGTCATTCT------------------GTAACCTGG---GGTATATTATCAACTCTTGGTTATTTATATATTCTTTATACTGCT---------------TGG------ATA---GGTGAAGTTGCAGTGTTAGCTGAAAAA------AGC---AACTCTGAGACAATT---AAG---AAA---GGA---GTT---CGT---TCATTA---GCTTGGTTTGTTTTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLTKL---A--GATK-KL------------LWK-LIFASTWMLVCGYIGE---A------F--NP--------GGAD------A---T---------SHS------VTW-GILSTLGYLYILYTA-----W--I-GEVAVLAEK--S-NSETI-K-K-G-V-R-SL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929416 [unk-env1-c] PRGD_OTU120_b131a481b8eaa8b4e21f3262a3462e29 gb|KJ929416| PRGD_OTU120_b131a481b8eaa8b4e21f3262a3462e29, putative proteorhodopsin gene, partial cds. PRGD_OTU120_b131a481b8eaa8b4e21f3262a3462e29, putative proteorhodopsin gene, partial cds. KJ929416 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683) ATATTAACTGTGCCGCTTATGTGCGTAGAATTCTATCTATTAACAAAACTAGCAGGAGCTACTAAGAAATTATTATGGAAGTTAATATTTGCATCAACTTGGATGCTTGTTTGTGGTTACATTGGAGAAGCATTTAACCCTGGAGGTGCTGATGCAACTAGTCATTCTGTAACTTGGGGTATATTATCAACTCTTGGTTATTTATATATTCTTTATACTGCTTGGATAGGTGAAGTTGCAGTGTTAGCTGAAAAAAGCAACTCTGAGACAATTAAGAAAGGAGTTCGTTCATTAGCTTGGTTTGTTTTAGTA ILTVPLMCVEFYLLTKLAGATKKLLWKLIFASTWMLVCGYIGEAFNPGGADATSHSVTWGILSTLGYLYILYTAWIGEVAVLAEKSNSETIKKGVRSLAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTAACTGTGCCGCTTATGTGCGTAGAATTCTATCTATTAACAAAACTA---------GCA------GGAGCTACTAAG---AAATTA------------------------------------TTATGGAAG---TTAATATTTGCATCAACTTGGATGCTTGTTTGTGGTTACATTGGAGAA---------GCA------------------TTT------AACCCT------------------------GGAGGTGCTGAT------------------GCA---------ACT---------------------------AGTCATTCT------------------GTAACTTGG---GGTATATTATCAACTCTTGGTTATTTATATATTCTTTATACTGCT---------------TGG------ATA---GGTGAAGTTGCAGTGTTAGCTGAAAAA------AGC---AACTCTGAGACAATT---AAG---AAA---GGA---GTT---CGT---TCATTA---GCTTGGTTTGTTTTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLTKL---A--GATK-KL------------LWK-LIFASTWMLVCGYIGE---A------F--NP--------GGAD------A---T---------SHS------VTW-GILSTLGYLYILYTA-----W--I-GEVAVLAEK--S-NSETI-K-K-G-V-R-SL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929412 [unk-env1-c] PRGD_OTU120_otuREP_6344c9be88300bd39515d8071a4e0d8c gb|KJ929412| PRGD_OTU120_otuREP_6344c9be88300bd39515d8071a4e0d8c, putative proteorhodopsin gene, partial cds. PRGD_OTU120_otuREP_6344c9be88300bd39515d8071a4e0d8c, putative proteorhodopsin gene, partial cds. KJ929412 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097) ATATTAACTGTGCCCCTTATGTGCGTAGAATTCTATCTATTAACAAAATTAGCAGGAGCTACTAAGAAATTATTATGGAAGCTAATATTTGCATCAACTTGGATGCTTGTTTGTGGTTATATTGGAGAAGCATTTAATCCTGGAGGTGACGCTGCAACTAGTCATTCTGTAACTTGGGGTATATTATCTACTGTTGGGTATTTATACATTCTATATACTGTGTGGATAGGAGAAGTTGCGTTGTTGGCTGAAAAAAGTAACTCTGAGACAATTAAGAAAGGAGTTCGCTCATTAGCTTGGTTTGTTTTAGTT ILTVPLMCVEFYLLTKLAGATKKLLWKLIFASTWMLVCGYIGEAFNPGGDAATSHSVTWGILSTVGYLYILYTVWIGEVALLAEKSNSETIKKGVRSLAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTAACTGTGCCCCTTATGTGCGTAGAATTCTATCTATTAACAAAATTA---------GCA------GGAGCTACTAAG---AAATTA------------------------------------TTATGGAAG---CTAATATTTGCATCAACTTGGATGCTTGTTTGTGGTTATATTGGAGAA---------GCA------------------TTT------AATCCT------------------------GGAGGTGACGCT------------------GCA---------ACT---------------------------AGTCATTCT------------------GTAACTTGG---GGTATATTATCTACTGTTGGGTATTTATACATTCTATATACTGTG---------------TGG------ATA---GGAGAAGTTGCGTTGTTGGCTGAAAAA------AGT---AACTCTGAGACAATT---AAG---AAA---GGA---GTT---CGC---TCATTA---GCTTGGTTTGTTTTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLTKL---A--GATK-KL------------LWK-LIFASTWMLVCGYIGE---A------F--NP--------GGDA------A---T---------SHS------VTW-GILSTVGYLYILYTV-----W--I-GEVALLAEK--S-NSETI-K-K-G-V-R-SL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929721 [unk-env1-c] PRGD_OTU212_3bd8f716fb00ac0b9d9195b456c846a7 gb|KJ929721| PRGD_OTU212_3bd8f716fb00ac0b9d9195b456c846a7, putative proteorhodopsin gene, partial cds. PRGD_OTU212_3bd8f716fb00ac0b9d9195b456c846a7, putative proteorhodopsin gene, partial cds. KJ929721 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683), Indian Ocean (-14.48, 113.45) ACACTAACAGTTCCATTGATGTGTGTAGAATTTTATTTATTAACTAGAGCAGCAGGTGCTTCTAAAAGTTTATTAACTAAGTTAATCTTTGCCTCTGTTTGGATGCTTGTAGCAGGTTACATTGGAGAAGCATTTAATCCTGCAGGTGGTGATACTGGCCATTCTGTAACATGGGGTATTATTTCTACTTTAGGATACCTTTATATTTTACATACAGTTTGGCTTGGTGAAGTTGCACGACTTGCTGAAAATAGTAATTCTGAAACAATCAAATGTGGAGTAAGAACTCTAGCTTGGTTTGTTTTAGTA TLTVPLMCVEFYLLTRAAGASKSLLTKLIFASVWMLVAGYIGEAFNPAGGDTGHSVTWGIISTLGYLYILHTVWLGEVARLAENSNSETIKCGVRTLAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACTAACAGTTCCATTGATGTGTGTAGAATTTTATTTATTAACTAGAGCA---------GCA------GGTGCTTCTAAA---AGTTTA------------------------------------TTAACTAAG---TTAATCTTTGCCTCTGTTTGGATGCTTGTAGCAGGTTACATTGGAGAA---------GCA------------------TTT------AATCCT------------------------GCAGGT---GGT------------------GAT---------ACT---------------------------GGCCATTCT------------------GTAACATGG---GGTATTATTTCTACTTTAGGATACCTTTATATTTTACATACAGTT---------------TGG------CTT---GGTGAAGTTGCACGACTTGCTGAAAAT------AGT---AATTCTGAAACAATC---AAA---TGT---GGA---GTA---AGA---ACTCTA---GCTTGGTTTGTTTTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTRA---A--GASK-SL------------LTK-LIFASVWMLVAGYIGE---A------F--NP--------AG-G------D---T---------GHS------VTW-GIISTLGYLYILHTV-----W--L-GEVARLAEN--S-NSETI-K-C-G-V-R-TL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929720 [unk-env1-c] PRGD_OTU212_otuREP_69d2269845abe5a610d87d393d30ab84 gb|KJ929720| PRGD_OTU212_otuREP_69d2269845abe5a610d87d393d30ab84, putative proteorhodopsin gene, partial cds. PRGD_OTU212_otuREP_69d2269845abe5a610d87d393d30ab84, putative proteorhodopsin gene, partial cds. KJ929720 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -14.48 113.45 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-35.05, 23.73; -14.48, 113.45) ACACTAACAGTTCCATTGATGTGTGTGGAATTTTATTTATTAACTAGAGCAGCAGGTGCTTCTAAAGGTTTATTAACTAAGTTGATCTTTGCCTCTGTTTGGATGCTTGTAGCAGGTTACATTGGAGAAGCATTTAATCCTGCAGGCGGTGATACTGGTCATTCTGTAACATGGGGTATTATTTCTACATTAGGATACCTTTATATTTTACATACAGTTTGGCTTGGTGAAGTTGCACAACTTGCTGAAAATAGTAATTCTGAAACAATAAAATGTGGAGTAAGAACTCTTGCTTGGTTTGTTTTAGTA TLTVPLMCVEFYLLTRAAGASKGLLTKLIFASVWMLVAGYIGEAFNPAGGDTGHSVTWGIISTLGYLYILHTVWLGEVAQLAENSNSETIKCGVRTLAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACTAACAGTTCCATTGATGTGTGTGGAATTTTATTTATTAACTAGAGCA---------GCA------GGTGCTTCTAAA---GGTTTA------------------------------------TTAACTAAG---TTGATCTTTGCCTCTGTTTGGATGCTTGTAGCAGGTTACATTGGAGAA---------GCA------------------TTT------AATCCT------------------------GCAGGC---GGT------------------GAT---------ACT---------------------------GGTCATTCT------------------GTAACATGG---GGTATTATTTCTACATTAGGATACCTTTATATTTTACATACAGTT---------------TGG------CTT---GGTGAAGTTGCACAACTTGCTGAAAAT------AGT---AATTCTGAAACAATA---AAA---TGT---GGA---GTA---AGA---ACTCTT---GCTTGGTTTGTTTTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTRA---A--GASK-GL------------LTK-LIFASVWMLVAGYIGE---A------F--NP--------AG-G------D---T---------GHS------VTW-GIISTLGYLYILHTV-----W--L-GEVAQLAEN--S-NSETI-K-C-G-V-R-TL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929908 [unk-env1-c] PRGD_OTU359_otuREP_042a9037a3d9218eb1628488714d123b gb|KJ929908| PRGD_OTU359_otuREP_042a9037a3d9218eb1628488714d123b, putative proteorhodopsin gene, partial cds. PRGD_OTU359_otuREP_042a9037a3d9218eb1628488714d123b, putative proteorhodopsin gene, partial cds. KJ929908 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -33.28 45.35 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Indian Ocean (-23.5956, 69.0419; -33.28, 45.35) ATCCTAACAGTTCCGTTGATGTGTGTAGAATTTTATTTATTAACAAGATTGGCAGGAGCAACTAAGTCTCTATTATGGAAATTAATATTTGCTTCAACATGGATGTTAGTATGTGGTTACATTGGTGAAGCATTCAATGTAGAGAATACAACTGGACACTCAGTAACTTGGGGTGTATTATCTACTTTAGGATACCTATACATTTTACACTCAGTTTGGATCGGAGAAGTTGCAAAACTTGCTGACTCTAGTGGATCTGACGTTGTTAAGAAAGGTGTGAGAGCATTAGGATGGTTCGTATTAGTT ILTVPLMCVEFYLLTRLAGATKSLLWKLIFASTWMLVCGYIGEAFNVENTTGHSVTWGVLSTLGYLYILHSVWIGEVAKLADSSGSDVVKKGVRALGWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCTAACAGTTCCGTTGATGTGTGTAGAATTTTATTTATTAACAAGATTG---------GCA------GGAGCAACTAAG---TCTCTA------------------------------------TTATGGAAA---TTAATATTTGCTTCAACATGGATGTTAGTATGTGGTTACATTGGTGAA---------GCA------------------TTC------AATGTA------------------------GAG------AAT------------------ACA---------ACT---------------------------GGACACTCA------------------GTAACTTGG---GGTGTATTATCTACTTTAGGATACCTATACATTTTACACTCAGTT---------------TGG------ATC---GGAGAAGTTGCAAAACTTGCTGACTCT------AGT---GGATCTGACGTTGTT---AAG---AAA---GGT---GTG---AGA---GCATTA---GGATGGTTCGTATTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLTRL---A--GATK-SL------------LWK-LIFASTWMLVCGYIGE---A------F--NV--------E--N------T---T---------GHS------VTW-GVLSTLGYLYILHSV-----W--I-GEVAKLADS--S-GSDVV-K-K-G-V-R-AL-GWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929414 [unk-env1-c] PRGD_OTU120_2f781bb642454ae1f365ff28cbac79d5 gb|KJ929414| PRGD_OTU120_2f781bb642454ae1f365ff28cbac79d5, putative proteorhodopsin gene, partial cds. PRGD_OTU120_2f781bb642454ae1f365ff28cbac79d5, putative proteorhodopsin gene, partial cds. KJ929414 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTTTAACTGTCCCTTTAATGTGTGTTGAATTTTACCTTCTGACAAGACTAGCAGGTGCAACTAAGTCACTTTTATGGAAATTAATTTTTGCGTCTACATGGATGTTGGTATGTGGATATATTGGAGAAGCCTTTAATCCAGGTGGAGCTGGAGCAACTAGTCACTCTGTTACTTGGGGAGTTCTTTCAACTCTAGGTTACTTATACATACTTTACAACGCATGGTTTGGTGAAGTTGCTCAGTTAGCAGAAAAGAGTAATTCCGACGTTATTAAAAAAGGAGTAAGATCTCTAGCATGGTTTGTATTAGTA ILTVPLMCVEFYLLTRLAGATKSLLWKLIFASTWMLVCGYIGEAFNPGGAGATSHSVTWGVLSTLGYLYILYNAWFGEVAQLAEKSNSDVIKKGVRSLAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACTGTCCCTTTAATGTGTGTTGAATTTTACCTTCTGACAAGACTA---------GCA------GGTGCAACTAAG---TCACTT------------------------------------TTATGGAAA---TTAATTTTTGCGTCTACATGGATGTTGGTATGTGGATATATTGGAGAA---------GCC------------------TTT------AATCCA------------------------GGTGGAGCTGGA------------------GCA---------ACT---------------------------AGTCACTCT------------------GTTACTTGG---GGAGTTCTTTCAACTCTAGGTTACTTATACATACTTTACAACGCA---------------TGG------TTT---GGTGAAGTTGCTCAGTTAGCAGAAAAG------AGT---AATTCCGACGTTATT---AAA---AAA---GGA---GTA---AGA---TCTCTA---GCATGGTTTGTATTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLTRL---A--GATK-SL------------LWK-LIFASTWMLVCGYIGE---A------F--NP--------GGAG------A---T---------SHS------VTW-GVLSTLGYLYILYNA-----W--F-GEVAQLAEK--S-NSDVI-K-K-G-V-R-SL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929415 [unk-env1-c] PRGD_OTU120_ab8a7701e06e9dea1b18b384739415b2 gb|KJ929415| PRGD_OTU120_ab8a7701e06e9dea1b18b384739415b2, putative proteorhodopsin gene, partial cds. PRGD_OTU120_ab8a7701e06e9dea1b18b384739415b2, putative proteorhodopsin gene, partial cds. KJ929415 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -35.05 23.73 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ATTTTAACTGTTCCTTTAATGTGTGTTGAATTTTACCTTTTGACAAGACTAGCAGGTGCAACTAAGTCACTTTTATGGAAATTAATTTTTGCGTCTACATGGATGTTAGTATGTGGATATATTGGAGAAGCCTTTAATCCAGGTGGAGCTGGAGCAACTAGTCACTCTGTTACTTGGGGAGTTCTTTCAACTCTAGGTTACTTATACATACTTTACAACGCATGGTTTGGTGAAGTTGCTCAGTTAGCAGAAAAGAGTAATTCCGACGTTATTAAAAAAGGAGTAAGATCTCTAGCATGGTTTGTATTAGTA ILTVPLMCVEFYLLTRLAGATKSLLWKLIFASTWMLVCGYIGEAFNPGGAGATSHSVTWGVLSTLGYLYILYNAWFGEVAQLAEKSNSDVIKKGVRSLAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACTGTTCCTTTAATGTGTGTTGAATTTTACCTTTTGACAAGACTA---------GCA------GGTGCAACTAAG---TCACTT------------------------------------TTATGGAAA---TTAATTTTTGCGTCTACATGGATGTTAGTATGTGGATATATTGGAGAA---------GCC------------------TTT------AATCCA------------------------GGTGGAGCTGGA------------------GCA---------ACT---------------------------AGTCACTCT------------------GTTACTTGG---GGAGTTCTTTCAACTCTAGGTTACTTATACATACTTTACAACGCA---------------TGG------TTT---GGTGAAGTTGCTCAGTTAGCAGAAAAG------AGT---AATTCCGACGTTATT---AAA---AAA---GGA---GTA---AGA---TCTCTA---GCATGGTTTGTATTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLTRL---A--GATK-SL------------LWK-LIFASTWMLVCGYIGE---A------F--NP--------GGAG------A---T---------SHS------VTW-GVLSTLGYLYILYNA-----W--F-GEVAQLAEK--S-NSDVI-K-K-G-V-R-SL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929763 [unk-env1-c] PRGD_OTU233_1c091f11ee7489492815d7f7dcb3de7c gb|KJ929763| PRGD_OTU233_1c091f11ee7489492815d7f7dcb3de7c, putative proteorhodopsin gene, partial cds. PRGD_OTU233_1c091f11ee7489492815d7f7dcb3de7c, putative proteorhodopsin gene, partial cds. KJ929763 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2003 #na Indian Ocean marine -23.5956 69.0419 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-23.5287, -117.8637), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45; -33.28, 45.35) ATTTTAACAGTACCTCTAATGTGTGTTGAATTTTATTTATTAACAAGAATGGCTGGAGCTACAAAAAGCTTAATGTGGAAGCTAATTATTGCATCAACATGGATGCTAATTGCGGGATACATTGGTGAGTCATTCAATCCAGAAGGTGGAAGTACTTCTCACTCTGTTACATGGGGTGTTATTTCAACTTTAGGTTACTTATATGTTCTTTATACTGCATGGTATGGAGAAGTTGCTCAGCTTGCTGAGAAGAGTAATGACGAGGTTGTTAAGAGAGGTGTTAGAACATTAGCTTGGTTTGTATTAGTT ILTVPLMCVEFYLLTRMAGATKSLMWKLIIASTWMLIAGYIGESFNPEGGSTSHSVTWGVISTLGYLYVLYTAWYGEVAQLAEKSNDEVVKRGVRTLAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACAGTACCTCTAATGTGTGTTGAATTTTATTTATTAACAAGAATG---------GCT------GGAGCTACAAAA---AGCTTA------------------------------------ATGTGGAAG---CTAATTATTGCATCAACATGGATGCTAATTGCGGGATACATTGGTGAG---------TCA------------------TTC------AATCCA------------------------GAAGGT---GGA------------------AGT---------ACT---------------------------TCTCACTCT------------------GTTACATGG---GGTGTTATTTCAACTTTAGGTTACTTATATGTTCTTTATACTGCA---------------TGG------TAT---GGAGAAGTTGCTCAGCTTGCTGAGAAG------AGT---AATGACGAGGTTGTT---AAG---AGA---GGT---GTT---AGA---ACATTA---GCTTGGTTTGTATTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLTRM---A--GATK-SL------------MWK-LIIASTWMLIAGYIGE---S------F--NP--------EG-G------S---T---------SHS------VTW-GVISTLGYLYVLYTA-----W--Y-GEVAQLAEK--S-NDEVV-K-R-G-V-R-TL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929762 [unk-env1-c] PRGD_OTU233_otuREP_35f009474c2c1a0ee80abf203a7c155d gb|KJ929762| PRGD_OTU233_otuREP_35f009474c2c1a0ee80abf203a7c155d, putative proteorhodopsin gene, partial cds. PRGD_OTU233_otuREP_35f009474c2c1a0ee80abf203a7c155d, putative proteorhodopsin gene, partial cds. KJ929762 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683) ATTTTAACTGTGCCGTTGATGTGTGTTGAGTTTTATTTATTAACAAAAATCGCTGGAGCCACAAAAACATTGTTGTGGAAACTAATAATTGCTTCTGCATGGATGCTGATTGCCGGATATATTGGTGAAGCATTCAATCCAGGTGGAGCTGCTGCTACATCTCACTCTGTAACTTGGGGAGTACTTTCAACTATAGGTTACATTTACGTACTGTATACAGCATGGTATGGAGAAGTTGCTCAATTGGCTGAGAAAAGTAATTCAGAAGCAGTTAAAAGAGGTGTGAGAACGCTAGCATGGTTTGTACTTGTA ILTVPLMCVEFYLLTKIAGATKTLLWKLIIASAWMLIAGYIGEAFNPGGAAATSHSVTWGVLSTIGYIYVLYTAWYGEVAQLAEKSNSEAVKRGVRTLAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACTGTGCCGTTGATGTGTGTTGAGTTTTATTTATTAACAAAAATC---------GCT------GGAGCCACAAAA---ACATTG------------------------------------TTGTGGAAA---CTAATAATTGCTTCTGCATGGATGCTGATTGCCGGATATATTGGTGAA---------GCA------------------TTC------AATCCA------------------------GGTGGAGCTGCT------------------GCT---------ACA---------------------------TCTCACTCT------------------GTAACTTGG---GGAGTACTTTCAACTATAGGTTACATTTACGTACTGTATACAGCA---------------TGG------TAT---GGAGAAGTTGCTCAATTGGCTGAGAAA------AGT---AATTCAGAAGCAGTT---AAA---AGA---GGT---GTG---AGA---ACGCTA---GCATGGTTTGTACTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLTKI---A--GATK-TL------------LWK-LIIASAWMLIAGYIGE---A------F--NP--------GGAA------A---T---------SHS------VTW-GVLSTIGYIYVLYTA-----W--Y-GEVAQLAEK--S-NSEAV-K-R-G-V-R-TL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929494 [unk-env1-c] PRGD_OTU137_otuREP_01eae0aab4a6052ac243ed37ccfa6f8a gb|KJ929494| PRGD_OTU137_otuREP_01eae0aab4a6052ac243ed37ccfa6f8a, putative proteorhodopsin gene, partial cds. PRGD_OTU137_otuREP_01eae0aab4a6052ac243ed37ccfa6f8a, putative proteorhodopsin gene, partial cds. KJ929494 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -33.9602, -73.3769), English Channel (48.7717, -3.9683) ACTTTAACTGTTCCTTTAATGTGTGTTGAGTTCTACTTACTTACTAAGGTTGCTGGTGCAAAATCTAGTCTTTTGTGGAAGCTGATTGGTGCTTCTGTATTGATGCTAGTTGCTGGTTACATTGGTGAAGCTTTCAACCCTGAAGGTGGTAGCACTGCTCACTCTGTTAAGTGGGGTGTTATTTCTACAGTAGGTTATGTTTACATTCTTTATACCGCTTGGTATGGTGAGGTAGCTAACTTGGCTGCTAGTAGTGGAAATGAAGCTGTTAAAACTGGTGTTAGAACTCTAGCATGGTTTGTATTAGTT TLTVPLMCVEFYLLTKVAGAKSSLLWKLIGASVLMLVAGYIGEAFNPEGGSTAHSVKWGVISTVGYVYILYTAWYGEVANLAASSGNEAVKTGVRTLAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTTAACTGTTCCTTTAATGTGTGTTGAGTTCTACTTACTTACTAAGGTT---------GCT------GGTGCAAAATCT---AGTCTT------------------------------------TTGTGGAAG---CTGATTGGTGCTTCTGTATTGATGCTAGTTGCTGGTTACATTGGTGAA---------GCT------------------TTC------AACCCT------------------------GAAGGT---GGT------------------AGC---------ACT---------------------------GCTCACTCT------------------GTTAAGTGG---GGTGTTATTTCTACAGTAGGTTATGTTTACATTCTTTATACCGCT---------------TGG------TAT---GGTGAGGTAGCTAACTTGGCTGCTAGT------AGT---GGAAATGAAGCTGTT---AAA---ACT---GGT---GTT---AGA---ACTCTA---GCATGGTTTGTATTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTKV---A--GAKS-SL------------LWK-LIGASVLMLVAGYIGE---A------F--NP--------EG-G------S---T---------AHS------VKW-GVISTVGYVYILYTA-----W--Y-GEVANLAAS--S-GNEAV-K-T-G-V-R-TL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929496 [unk-env1-c] PRGD_OTU137_93d5d537ce0338cc5876dac057775cce gb|KJ929496| PRGD_OTU137_93d5d537ce0338cc5876dac057775cce, putative proteorhodopsin gene, partial cds. PRGD_OTU137_93d5d537ce0338cc5876dac057775cce, putative proteorhodopsin gene, partial cds. KJ929496 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Mediterranean Sea (33.935, 18.508), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975) ACTTTAACTGTTCCTTTAATGTGTGTTGAGTTTTATTTACTTACTAAGGTTGCTGGTGCAAAATCTAGTCTTTTATGGAAGCTAATTGGTGCTTCTGTATTAATGCTAGTTGCTGGTTACATTGGTGAAGCTTTCAACCCTGAAGGTGGTAGCACTGCTCACTCTGTTAAGTGGGGTGTCATCTCTACAGTAGGTTATGTTTACATTCTTTATACCGCTTGGTATGGTGAGGTAGCTAACTTGGCTGCTAGTAGTGGAAATGAAGCTGTTAAAACTGGTGTTAGAACTTTAGCATGGTTTGTATTAGTT TLTVPLMCVEFYLLTKVAGAKSSLLWKLIGASVLMLVAGYIGEAFNPEGGSTAHSVKWGVISTVGYVYILYTAWYGEVANLAASSGNEAVKTGVRTLAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTTAACTGTTCCTTTAATGTGTGTTGAGTTTTATTTACTTACTAAGGTT---------GCT------GGTGCAAAATCT---AGTCTT------------------------------------TTATGGAAG---CTAATTGGTGCTTCTGTATTAATGCTAGTTGCTGGTTACATTGGTGAA---------GCT------------------TTC------AACCCT------------------------GAAGGT---GGT------------------AGC---------ACT---------------------------GCTCACTCT------------------GTTAAGTGG---GGTGTCATCTCTACAGTAGGTTATGTTTACATTCTTTATACCGCT---------------TGG------TAT---GGTGAGGTAGCTAACTTGGCTGCTAGT------AGT---GGAAATGAAGCTGTT---AAA---ACT---GGT---GTT---AGA---ACTTTA---GCATGGTTTGTATTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTKV---A--GAKS-SL------------LWK-LIGASVLMLVAGYIGE---A------F--NP--------EG-G------S---T---------AHS------VKW-GVISTVGYVYILYTA-----W--Y-GEVANLAAS--S-GNEAV-K-T-G-V-R-TL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929495 [unk-env1-c] PRGD_OTU137_74f8333b91701128e95b6755923ba491 gb|KJ929495| PRGD_OTU137_74f8333b91701128e95b6755923ba491, putative proteorhodopsin gene, partial cds. PRGD_OTU137_74f8333b91701128e95b6755923ba491, putative proteorhodopsin gene, partial cds. KJ929495 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (76.3333, 14.8833), Arctic Ocean-Pacific side (72.0542, -130.8781), English Channel (48.7717, -3.9683), Mediterranean Sea (38.6308, 7.9097) ATTTTAACAGTTCCTTTGATGTGTGTTGAGTTTTATTTACTTACTAAGGCAGCTGGTGCTAAGTCTAATCTTTTATGGAAACTAATTGGTGCTTCTGTATTGATGCTAGTAGGTGGTTTCATTGGTGAAGCTTTCAGTGATGGTAGCACTGCTCATTCTGTTAAGTGGGGTGTTATTTCTACTGTAGGTTATGTTTACATTCTTTACACTGCATGGTATGGTGAAGTTGCTAATTTAGCTGCTTCTAGTGGTAATGACGCCGTTAAATCTGGTGTTAGAGCTTTAGCATGGTTTGTATTGGTT ILTVPLMCVEFYLLTKAAGAKSNLLWKLIGASVLMLVGGFIGEAFSDGSTAHSVKWGVISTVGYVYILYTAWYGEVANLAASSGNDAVKSGVRALAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAACAGTTCCTTTGATGTGTGTTGAGTTTTATTTACTTACTAAGGCA---------GCT------GGTGCTAAGTCT---AATCTT------------------------------------TTATGGAAA---CTAATTGGTGCTTCTGTATTGATGCTAGTAGGTGGTTTCATTGGTGAA---------GCT------------------TTC------AGTGAT---------------------------------GGT------------------AGC---------ACT---------------------------GCTCATTCT------------------GTTAAGTGG---GGTGTTATTTCTACTGTAGGTTATGTTTACATTCTTTACACTGCA---------------TGG------TAT---GGTGAAGTTGCTAATTTAGCTGCTTCT------AGT---GGTAATGACGCCGTT---AAA---TCT---GGT---GTT---AGA---GCTTTA---GCATGGTTTGTATTGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILTVPLMCVEFYLLTKA---A--GAKS-NL------------LWK-LIGASVLMLVGGFIGE---A------F--SD-----------G------S---T---------AHS------VKW-GVISTVGYVYILYTA-----W--Y-GEVANLAAS--S-GNDAV-K-S-G-V-R-AL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929497 [unk-env1-c] PRGD_OTU137_95494d93bded7757afb9af151ba39a16 gb|KJ929497| PRGD_OTU137_95494d93bded7757afb9af151ba39a16, putative proteorhodopsin gene, partial cds. PRGD_OTU137_95494d93bded7757afb9af151ba39a16, putative proteorhodopsin gene, partial cds. KJ929497 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-35.05, 23.73) ACTTTAACAGTACCTTTAATGTGTGTTGAGTTTTATTTACTTACTAAGGCAGCTGGTGCTAAGTCTAGTCTTTTATGGAAGTTAATTGGTGCTTCTGTATTGATGCTAGTAGCTGGTTTCATTGGTGAAGCTTTCAGTGATGGTAGCACTGCTCACTCTGTTAAGTGGGGTGTTATTTCTACTTTAGGTTATGTTTACATTCTTTACACTGCATGGTATGGTGAAGTTGCTAGTTTAGCTGCTTCTAGCGGTAATGACGCTGTTAAGTCAGGTGTTAGAGCTTTAGCATGGTTTGTATTAGTT TLTVPLMCVEFYLLTKAAGAKSSLLWKLIGASVLMLVAGFIGEAFSDGSTAHSVKWGVISTLGYVYILYTAWYGEVASLAASSGNDAVKSGVRALAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTTAACAGTACCTTTAATGTGTGTTGAGTTTTATTTACTTACTAAGGCA---------GCT------GGTGCTAAGTCT---AGTCTT------------------------------------TTATGGAAG---TTAATTGGTGCTTCTGTATTGATGCTAGTAGCTGGTTTCATTGGTGAA---------GCT------------------TTC------AGTGAT---------------------------------GGT------------------AGC---------ACT---------------------------GCTCACTCT------------------GTTAAGTGG---GGTGTTATTTCTACTTTAGGTTATGTTTACATTCTTTACACTGCA---------------TGG------TAT---GGTGAAGTTGCTAGTTTAGCTGCTTCT------AGC---GGTAATGACGCTGTT---AAG---TCA---GGT---GTT---AGA---GCTTTA---GCATGGTTTGTATTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTKA---A--GAKS-SL------------LWK-LIGASVLMLVAGFIGE---A------F--SD-----------G------S---T---------AHS------VKW-GVISTLGYVYILYTA-----W--Y-GEVASLAAS--S-GNDAV-K-S-G-V-R-AL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929283 [unk-env1-c] PRGD_OTU098_otuREP_6060072bab72b7933a32938db4ca9dad gb|KJ929283| PRGD_OTU098_otuREP_6060072bab72b7933a32938db4ca9dad, putative proteorhodopsin gene, partial cds. PRGD_OTU098_otuREP_6060072bab72b7933a32938db4ca9dad, putative proteorhodopsin gene, partial cds. KJ929283 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884), Arctic Ocean-Atlantic side (73.9992, 19.2097), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175; 33.935, 18.508) ACACTGACTGTTCCGTTGATGTGCGTTGAATTTTATTTATTAACTAAAGCTGCCGGAGCAAAACTGAGCTTATTATGGAAACTAATTGTAGCTTCTGTATGGATGCTGGTTGCGGGTTACATCGGAGAATCTTTCAACCCAGAAGGTGGAAGTACTTCTCACTCAGTAACTTGGGGTGTTCTATCAACTATTGGTTATGTTTACATTCTTTACACAGCATGGTTCGGTGAAGTGGCTAAATTGGCTGCTGACAGCAACAACGAATTGGTAAAGAAAGGTGTTAGAACTCTAGCTTGGTTTGTCTTAGTT TLTVPLMCVEFYLLTKAAGAKLSLLWKLIVASVWMLVAGYIGESFNPEGGSTSHSVTWGVLSTIGYVYILYTAWFGEVAKLAADSNNELVKKGVRTLAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACTGACTGTTCCGTTGATGTGCGTTGAATTTTATTTATTAACTAAAGCT---------GCC------GGAGCAAAACTG---AGCTTA------------------------------------TTATGGAAA---CTAATTGTAGCTTCTGTATGGATGCTGGTTGCGGGTTACATCGGAGAA---------TCT------------------TTC------AACCCA------------------------GAAGGT---GGA------------------AGT---------ACT---------------------------TCTCACTCA------------------GTAACTTGG---GGTGTTCTATCAACTATTGGTTATGTTTACATTCTTTACACAGCA---------------TGG------TTC---GGTGAAGTGGCTAAATTGGCTGCTGAC------AGC---AACAACGAATTGGTA---AAG---AAA---GGT---GTT---AGA---ACTCTA---GCTTGGTTTGTCTTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTKA---A--GAKL-SL------------LWK-LIVASVWMLVAGYIGE---S------F--NP--------EG-G------S---T---------SHS------VTW-GVLSTIGYVYILYTA-----W--F-GEVAKLAAD--S-NNELV-K-K-G-V-R-TL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929286 [unk-env1-c] PRGD_OTU098_46486e1b20258d444fbf872ac88de85c gb|KJ929286| PRGD_OTU098_46486e1b20258d444fbf872ac88de85c, putative proteorhodopsin gene, partial cds. PRGD_OTU098_46486e1b20258d444fbf872ac88de85c, putative proteorhodopsin gene, partial cds. KJ929286 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2008 #na Mediterranean Sea marine 33.762 29.175 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ACGCTGACTGTTCCGTTGATGTGCGTTGAATTTTATTTATTAACTAAAGCTGCCGGAGCAAAACTGAGCTTATTATGGAAACTAATTGTAGCTTCTGTATGGATGCTAGTTGCAGGTTACATCGGAGAATCTTTCAACCCTGAAGGTGGAAGTACTTCTCACTCAGTAACTTGGGGTGTTCTATCAACTATTGGTTATGTTTACATTCTTTACACAGCATGGTTCGGTGAAGTGGCTAAATTGGCTGCTGACAGCAACAACGAATTGGTAAAGAAAGGTGTTAGAACTCTAGCTTGGTTTGTCTTAGTT TLTVPLMCVEFYLLTKAAGAKLSLLWKLIVASVWMLVAGYIGESFNPEGGSTSHSVTWGVLSTIGYVYILYTAWFGEVAKLAADSNNELVKKGVRTLAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCTGACTGTTCCGTTGATGTGCGTTGAATTTTATTTATTAACTAAAGCT---------GCC------GGAGCAAAACTG---AGCTTA------------------------------------TTATGGAAA---CTAATTGTAGCTTCTGTATGGATGCTAGTTGCAGGTTACATCGGAGAA---------TCT------------------TTC------AACCCT------------------------GAAGGT---GGA------------------AGT---------ACT---------------------------TCTCACTCA------------------GTAACTTGG---GGTGTTCTATCAACTATTGGTTATGTTTACATTCTTTACACAGCA---------------TGG------TTC---GGTGAAGTGGCTAAATTGGCTGCTGAC------AGC---AACAACGAATTGGTA---AAG---AAA---GGT---GTT---AGA---ACTCTA---GCTTGGTTTGTCTTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTKA---A--GAKL-SL------------LWK-LIVASVWMLVAGYIGE---S------F--NP--------EG-G------S---T---------SHS------VTW-GVLSTIGYVYILYTA-----W--F-GEVAKLAAD--S-NNELV-K-K-G-V-R-TL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929611 [unk-env1-c] PRGD_OTU169_otuREP_06905972b841fd1d11db74e4e290f7a6 gb|KJ929611| PRGD_OTU169_otuREP_06905972b841fd1d11db74e4e290f7a6, putative proteorhodopsin gene, partial cds. PRGD_OTU169_otuREP_06905972b841fd1d11db74e4e290f7a6, putative proteorhodopsin gene, partial cds. KJ929611 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ACCTTAACGGTACCATTAATGTGTGTTGAGTTTTATCTCCTCACGAAAGCCGCTGGTGCATCTAAGAGTTTACTCTGGAAGCTGATTTTAGCCTCTGCCTGGATGCTTGTTGCAGGATATATAGGTGAAGCCTTCAATCCAGAAGGTGGAAGTACTTCTCACTCTGTAATGTGGGGTGTTTTCTCAACTATAGGTTATGTATACGTATTGTATACTGCTTGGATGGGTGAAGTAGCCAAATTAGCAGAGAGTAGTGGTGACCCAGTTGTACAAAAAGGTGTAAGAACCTTAGCTTGGTTCGTTCTTGTA TLTVPLMCVEFYLLTKAAGASKSLLWKLILASAWMLVAGYIGEAFNPEGGSTSHSVMWGVFSTIGYVYVLYTAWMGEVAKLAESSGDPVVQKGVRTLAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCTTAACGGTACCATTAATGTGTGTTGAGTTTTATCTCCTCACGAAAGCC---------GCT------GGTGCATCTAAG---AGTTTA------------------------------------CTCTGGAAG---CTGATTTTAGCCTCTGCCTGGATGCTTGTTGCAGGATATATAGGTGAA---------GCC------------------TTC------AATCCA------------------------GAAGGT---GGA------------------AGT---------ACT---------------------------TCTCACTCT------------------GTAATGTGG---GGTGTTTTCTCAACTATAGGTTATGTATACGTATTGTATACTGCT---------------TGG------ATG---GGTGAAGTAGCCAAATTAGCAGAGAGT------AGT---GGTGACCCAGTTGTA---CAA---AAA---GGT---GTA---AGA---ACCTTA---GCTTGGTTCGTTCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTKA---A--GASK-SL------------LWK-LILASAWMLVAGYIGE---A------F--NP--------EG-G------S---T---------SHS------VMW-GVFSTIGYVYVLYTA-----W--M-GEVAKLAES--S-GDPVV-Q-K-G-V-R-TL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929826 [unk-env1-c] PRGD_OTU277_otuREP_0a29373ae230a4e61f59047d506880de gb|KJ929826| PRGD_OTU277_otuREP_0a29373ae230a4e61f59047d506880de, putative proteorhodopsin gene, partial cds. PRGD_OTU277_otuREP_0a29373ae230a4e61f59047d506880de, putative proteorhodopsin gene, partial cds. KJ929826 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (71.501, 19.8025), English Channel (48.7717, -3.9683) ACACTTACTGTACCACTAATGTGTGTAGAGTTTTATTTACTCACCAAAGTAGCCGGTGCTAAGTTAGGATTGTTATGGAAGCTAATCTTAGCTTCTGTCTGGATGTTAGTAGCAGGTTATATAGGTGAAGCCTTCAATCCTGCTGACGGTACTTCTTCTCACTCAGTAATGTGGGGAGTAATTTCTACTTTAGGGTATTTGTATGTACTTTATACGGCTTGGGCGGGTGAAGTTGCTCAACTTGCTAAGGCAAGTAATAATCCTGTTGTAGAAAAAGGCGTAAGAGCCTTGGCTTGGTTTGTCCTTGCT TLTVPLMCVEFYLLTKVAGAKLGLLWKLILASVWMLVAGYIGEAFNPADGTSSHSVMWGVISTLGYLYVLYTAWAGEVAQLAKASNNPVVEKGVRALAWFVLA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACTTACTGTACCACTAATGTGTGTAGAGTTTTATTTACTCACCAAAGTA---------GCC------GGTGCTAAGTTA---GGATTG------------------------------------TTATGGAAG---CTAATCTTAGCTTCTGTCTGGATGTTAGTAGCAGGTTATATAGGTGAA---------GCC------------------TTC------AATCCT------------------------GCTGAC---GGT------------------ACT---------TCT---------------------------TCTCACTCA------------------GTAATGTGG---GGAGTAATTTCTACTTTAGGGTATTTGTATGTACTTTATACGGCT---------------TGG------GCG---GGTGAAGTTGCTCAACTTGCTAAGGCA------AGT---AATAATCCTGTTGTA---GAA---AAA---GGC---GTA---AGA---GCCTTG---GCTTGGTTTGTCCTTGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTKV---A--GAKL-GL------------LWK-LILASVWMLVAGYIGE---A------F--NP--------AD-G------T---S---------SHS------VMW-GVISTLGYLYVLYTA-----W--A-GEVAQLAKA--S-NNPVV-E-K-G-V-R-AL-AWFVLA-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929417 [unk-env1-c] PRGD_OTU121_otuREP_06bdce12eec5ad070a69144cb4f67be9 gb|KJ929417| PRGD_OTU121_otuREP_06bdce12eec5ad070a69144cb4f67be9, putative proteorhodopsin gene, partial cds. PRGD_OTU121_otuREP_06bdce12eec5ad070a69144cb4f67be9, putative proteorhodopsin gene, partial cds. KJ929417 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Bering strait marine 67.49 -168.12 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -33.9602, -73.3769), Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175; 33.935, 18.508), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) ACACTTACTGTTCCATTGATGTGTGTAGAATTTTATTTGCTTACCAAAGCAGCTGGAGCAAAAATCAACTTACTGTGGAAGCTTATTGGGGCATCAGTTCTGATGCTTGTGGCAGGTTACATTGGTGAAGCATTTAATCCTGAGGGAGGAAGCACAAGTCACTCAGTAATGTGGGGAGTTATATCTGCATTAGGATATATCTACATCCTTTACACTGCCTGGGCTGGTGAAGTAGCTAAATTAGCTGATGCTAGTGGAGATGCTGTCGTAAAAAAGGGCGTTCGTACTTTAGCTTGGTTTGTACTAGTA TLTVPLMCVEFYLLTKAAGAKINLLWKLIGASVLMLVAGYIGEAFNPEGGSTSHSVMWGVISALGYIYILYTAWAGEVAKLADASGDAVVKKGVRTLAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACTTACTGTTCCATTGATGTGTGTAGAATTTTATTTGCTTACCAAAGCA---------GCT------GGAGCAAAAATC---AACTTA------------------------------------CTGTGGAAG---CTTATTGGGGCATCAGTTCTGATGCTTGTGGCAGGTTACATTGGTGAA---------GCA------------------TTT------AATCCT------------------------GAGGGA---GGA------------------AGC---------ACA---------------------------AGTCACTCA------------------GTAATGTGG---GGAGTTATATCTGCATTAGGATATATCTACATCCTTTACACTGCC---------------TGG------GCT---GGTGAAGTAGCTAAATTAGCTGATGCT------AGT---GGAGATGCTGTCGTA---AAA---AAG---GGC---GTT---CGT---ACTTTA---GCTTGGTTTGTACTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTKA---A--GAKI-NL------------LWK-LIGASVLMLVAGYIGE---A------F--NP--------EG-G------S---T---------SHS------VMW-GVISALGYIYILYTA-----W--A-GEVAKLADA--S-GDAVV-K-K-G-V-R-TL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929418 [unk-env1-c] PRGD_OTU121_2c16ec64966f6b22003805deffdaea41 gb|KJ929418| PRGD_OTU121_2c16ec64966f6b22003805deffdaea41, putative proteorhodopsin gene, partial cds. PRGD_OTU121_2c16ec64966f6b22003805deffdaea41, putative proteorhodopsin gene, partial cds. KJ929418 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Bering strait marine 67.49 -168.12 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Atlantic side (73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (33.935, 18.508), Indian Ocean (-23.5956, 69.0419; -14.48, 113.45) ACACTTACTGTTCCATTGATGTGTGTAGAATTTTATTTGCTTACCAAAGCAGCTGGAGCAAAAATCAACTTACTGTGGAAGCTTATTGGGGCATCAGTTCTGATGCTTGTGGCAGGTTACATTGGTGAAGCATTTAATCCTGAGGGAGGAAGCACAAGTCACTCAGTAATGTGGGGAGTTATATCTGCATTAGGATATATCTACATCCTTTACACTGCCTGGGCTGGTGAAGTAGCTAAACTAGCTGATGCTAGTGGAGATGCTGTGGTAAAAAAGGGCGTTCGTACCTTAGCTTGGTTTGTACTAGTA TLTVPLMCVEFYLLTKAAGAKINLLWKLIGASVLMLVAGYIGEAFNPEGGSTSHSVMWGVISALGYIYILYTAWAGEVAKLADASGDAVVKKGVRTLAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACTTACTGTTCCATTGATGTGTGTAGAATTTTATTTGCTTACCAAAGCA---------GCT------GGAGCAAAAATC---AACTTA------------------------------------CTGTGGAAG---CTTATTGGGGCATCAGTTCTGATGCTTGTGGCAGGTTACATTGGTGAA---------GCA------------------TTT------AATCCT------------------------GAGGGA---GGA------------------AGC---------ACA---------------------------AGTCACTCA------------------GTAATGTGG---GGAGTTATATCTGCATTAGGATATATCTACATCCTTTACACTGCC---------------TGG------GCT---GGTGAAGTAGCTAAACTAGCTGATGCT------AGT---GGAGATGCTGTGGTA---AAA---AAG---GGC---GTT---CGT---ACCTTA---GCTTGGTTTGTACTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTKA---A--GAKI-NL------------LWK-LIGASVLMLVAGYIGE---A------F--NP--------EG-G------S---T---------SHS------VMW-GVISALGYIYILYTA-----W--A-GEVAKLADA--S-GDAVV-K-K-G-V-R-TL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929421 [unk-env1-c] PRGD_OTU121_a455d736ade0cbdaea85f7638ef0d8d7 gb|KJ929421| PRGD_OTU121_a455d736ade0cbdaea85f7638ef0d8d7, putative proteorhodopsin gene, partial cds. PRGD_OTU121_a455d736ade0cbdaea85f7638ef0d8d7, putative proteorhodopsin gene, partial cds. KJ929421 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Bering strait marine 67.49 -168.12 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ACACTTACTGTTCCCTTGATGTGTGTAGAGTTTTATTTGCTTACCAAAGCTGCTGGAGCGAAGATCAACTTACTGTGGAAGCTTATTGGAGCGTCAGTTCTGATGCTTGTGGCAGGTTATATTGGTGAAGCGTTTAATCCTGAGGGAGGAAGCACAAGTCACTCAGTAATGTGGGGAGTTATATCTACACTAGGATATATCTATATCCTTTACACTGCTTGGGCTGGTGAAGTAGCTAAATTAGCTGATGCTAGTGGAGATGCTGTGGTAAAAAAGGGCGTTCGTGCTTTAGCTTGGTTTGTTCTTGTA TLTVPLMCVEFYLLTKAAGAKINLLWKLIGASVLMLVAGYIGEAFNPEGGSTSHSVMWGVISTLGYIYILYTAWAGEVAKLADASGDAVVKKGVRALAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACTTACTGTTCCCTTGATGTGTGTAGAGTTTTATTTGCTTACCAAAGCT---------GCT------GGAGCGAAGATC---AACTTA------------------------------------CTGTGGAAG---CTTATTGGAGCGTCAGTTCTGATGCTTGTGGCAGGTTATATTGGTGAA---------GCG------------------TTT------AATCCT------------------------GAGGGA---GGA------------------AGC---------ACA---------------------------AGTCACTCA------------------GTAATGTGG---GGAGTTATATCTACACTAGGATATATCTATATCCTTTACACTGCT---------------TGG------GCT---GGTGAAGTAGCTAAATTAGCTGATGCT------AGT---GGAGATGCTGTGGTA---AAA---AAG---GGC---GTT---CGT---GCTTTA---GCTTGGTTTGTTCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTKA---A--GAKI-NL------------LWK-LIGASVLMLVAGYIGE---A------F--NP--------EG-G------S---T---------SHS------VMW-GVISTLGYIYILYTA-----W--A-GEVAKLADA--S-GDAVV-K-K-G-V-R-AL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929419 [unk-env1-c] PRGD_OTU121_6d399e565f44c2a5f4f9946a3b4f752c gb|KJ929419| PRGD_OTU121_6d399e565f44c2a5f4f9946a3b4f752c, putative proteorhodopsin gene, partial cds. PRGD_OTU121_6d399e565f44c2a5f4f9946a3b4f752c, putative proteorhodopsin gene, partial cds. KJ929419 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12) ACACTTACTGTTCCATTGATGTGTGTAGAATTTTATTTGCTTACCAAAGCAGCTGGAGCAAAAATCAACTTACTGTGGAAGCTTATTGGGGCATCAGTTCTGATGCTTGTGGCAGGTTACATTGGTGAAGCGTTTAATCCTGTAACCGTTGACGCATATGGTGTTAAAGTAGGAAGCACAAGTCACTCAGTAATGTGGGGAGTTATATCTGCATTAGGATATATCTACATCCTTTACACTGCCTGGGCTGGTGAAGTAGCTAAATTAGCTGATGCTAGTGGAGATGCTGTGGTAAAAAAAGGCGTTCGTACCTTAGCTTGGTTTGTACTAGTA TLTVPLMCVEFYLLTKAAGAKINLLWKLIGASVLMLVAGYIGEAFNPVTVDAYGVKVGSTSHSVMWGVISALGYIYILYTAWAGEVAKLADASGDAVVKKGVRTLAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACTTACTGTTCCATTGATGTGTGTAGAATTTTATTTGCTTACCAAAGCA---------GCT------GGAGCAAAAATC---AACTTA------------------------------------CTGTGGAAG---CTTATTGGGGCATCAGTTCTGATGCTTGTGGCAGGTTACATTGGTGAA---------GCG------------------TTT------AATCCTGTAACCGTTGACGCATATGGTGTTAAAGTA---GGA------------------AGC---------ACA---------------------------AGTCACTCA------------------GTAATGTGG---GGAGTTATATCTGCATTAGGATATATCTACATCCTTTACACTGCC---------------TGG------GCT---GGTGAAGTAGCTAAATTAGCTGATGCT------AGT---GGAGATGCTGTGGTA---AAA---AAA---GGC---GTT---CGT---ACCTTA---GCTTGGTTTGTACTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTKA---A--GAKI-NL------------LWK-LIGASVLMLVAGYIGE---A------F--NPVTVDAYGVKV-G------S---T---------SHS------VMW-GVISALGYIYILYTA-----W--A-GEVAKLADA--S-GDAVV-K-K-G-V-R-TL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929420 [unk-env1-c] PRGD_OTU121_7db8fa909716034d68ee4e8b4d04944e gb|KJ929420| PRGD_OTU121_7db8fa909716034d68ee4e8b4d04944e, putative proteorhodopsin gene, partial cds. PRGD_OTU121_7db8fa909716034d68ee4e8b4d04944e, putative proteorhodopsin gene, partial cds. KJ929420 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781) ACATTGACTGTCCCGCTGATGTGTGTTGAATTTTATTTACTGACCAAAGCAGCAGGTGCCAAGACCAGCTTACTTTGGAAACTTATCGCTGCTTCTGTATTGATGCTAGTAGCAGGTTACATTGGTGAGGCATTTAATCCTGAAGGAGGAAGTACTTCTCATTCAGTAATGTGGGGAGTTATTTCAGCATTAGGTTATGCGTATATTCTTTATACCGCATGGGCAGGTGAAGTAGCTCAATTAGCTGCAGCGAGTAACGATCCTGTGGTAGAAAAAGGTGTCCGAACTTTAGCTTGGTTCGTATTAGTA TLTVPLMCVEFYLLTKAAGAKTSLLWKLIAASVLMLVAGYIGEAFNPEGGSTSHSVMWGVISALGYAYILYTAWAGEVAQLAAASNDPVVEKGVRTLAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATTGACTGTCCCGCTGATGTGTGTTGAATTTTATTTACTGACCAAAGCA---------GCA------GGTGCCAAGACC---AGCTTA------------------------------------CTTTGGAAA---CTTATCGCTGCTTCTGTATTGATGCTAGTAGCAGGTTACATTGGTGAG---------GCA------------------TTT------AATCCT------------------------GAAGGA---GGA------------------AGT---------ACT---------------------------TCTCATTCA------------------GTAATGTGG---GGAGTTATTTCAGCATTAGGTTATGCGTATATTCTTTATACCGCA---------------TGG------GCA---GGTGAAGTAGCTCAATTAGCTGCAGCG------AGT---AACGATCCTGTGGTA---GAA---AAA---GGT---GTC---CGA---ACTTTA---GCTTGGTTCGTATTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTKA---A--GAKT-SL------------LWK-LIAASVLMLVAGYIGE---A------F--NP--------EG-G------S---T---------SHS------VMW-GVISALGYAYILYTA-----W--A-GEVAQLAAA--S-NDPVV-E-K-G-V-R-TL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929752 [unk-env1-c] PRGD_OTU228_otuREP_fc0503ebf4bca2ce089300da800cd891 gb|KJ929752| PRGD_OTU228_otuREP_fc0503ebf4bca2ce089300da800cd891, putative proteorhodopsin gene, partial cds. PRGD_OTU228_otuREP_fc0503ebf4bca2ce089300da800cd891, putative proteorhodopsin gene, partial cds. KJ929752 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Pacific side marine 70.9139 -128.9264 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -23.5287, -117.8637), Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Mediterranean Sea (33.762, 29.175), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-14.48, 113.45) ACGCTTACAGTTCCTTTGATGTGTGTTGAATTCTATTTACTTACTAAAGCAGCTGGAGCTAAAATTGGCCTGCTTTGGAAATTAATCGCTGCATCAGTTTGGATGCTTGTAACAGGTTACATTGGTGAGGCATTTACAGACGGTTCTACTGGGCATTCAGTGCTATGGGGCTTCCTATCTGCCATAGGTTATTTCTACATTCTGTACACAGCTTGGTTTGGTGAGGTTGCGAAATTAGCAGATGCTAGTGAAAATGCAGCTGTTAAAAAAGGTGTAAGAACTTTAGCTTGGTTTGTGTTAGTA TLTVPLMCVEFYLLTKAAGAKIGLLWKLIAASVWMLVTGYIGEAFTDGSTGHSVLWGFLSAIGYFYILYTAWFGEVAKLADASENAAVKKGVRTLAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCTTACAGTTCCTTTGATGTGTGTTGAATTCTATTTACTTACTAAAGCA---------GCT------GGAGCTAAAATT---GGCCTG------------------------------------CTTTGGAAA---TTAATCGCTGCATCAGTTTGGATGCTTGTAACAGGTTACATTGGTGAG---------GCA------------------TTT------ACAGAC---------------------------------GGT------------------TCT---------ACT---------------------------GGGCATTCA------------------GTGCTATGG---GGCTTCCTATCTGCCATAGGTTATTTCTACATTCTGTACACAGCT---------------TGG------TTT---GGTGAGGTTGCGAAATTAGCAGATGCT------AGT---GAAAATGCAGCTGTT---AAA---AAA---GGT---GTA---AGA---ACTTTA---GCTTGGTTTGTGTTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTKA---A--GAKI-GL------------LWK-LIAASVWMLVTGYIGE---A------F--TD-----------G------S---T---------GHS------VLW-GFLSAIGYFYILYTA-----W--F-GEVAKLADA--S-ENAAV-K-K-G-V-R-TL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929753 [unk-env1-c] PRGD_OTU228_f72f1e43bbac923c42458b7f2e1fd373 gb|KJ929753| PRGD_OTU228_f72f1e43bbac923c42458b7f2e1fd373, putative proteorhodopsin gene, partial cds. PRGD_OTU228_f72f1e43bbac923c42458b7f2e1fd373, putative proteorhodopsin gene, partial cds. KJ929753 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 25-janv-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ACGCTCACAGTGCCACTTATGTGTGTCGAGTTTTACTTGCTTACCAAAGTAGCTGGAGCCAAAACAAGTCTGCTTTGGAAACTAATCGCAGCTTCTGTATGGATGCTGGTGACCGGTTACATTGGTGAGGCATTTAATCCCGCAGGAGGCAGTACTACTCACTCTGTACTTTGGGGTTTCTTATCTACTTTGGGCTATTTATATATCCTGTATACTGCGTGGTATGGAGAAGTGGCCAAGTTGGCAGATAACAGTGGCGACGCAGCCGTTAAAAAAGGAGTACGCACGCTTGCGTGGTTCGTTCTAGTA TLTVPLMCVEFYLLTKVAGAKTSLLWKLIAASVWMLVTGYIGEAFNPAGGSTTHSVLWGFLSTLGYLYILYTAWYGEVAKLADNSGDAAVKKGVRTLAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCTCACAGTGCCACTTATGTGTGTCGAGTTTTACTTGCTTACCAAAGTA---------GCT------GGAGCCAAAACA---AGTCTG------------------------------------CTTTGGAAA---CTAATCGCAGCTTCTGTATGGATGCTGGTGACCGGTTACATTGGTGAG---------GCA------------------TTT------AATCCC------------------------GCAGGA---GGC------------------AGT---------ACT---------------------------ACTCACTCT------------------GTACTTTGG---GGTTTCTTATCTACTTTGGGCTATTTATATATCCTGTATACTGCG---------------TGG------TAT---GGAGAAGTGGCCAAGTTGGCAGATAAC------AGT---GGCGACGCAGCCGTT---AAA---AAA---GGA---GTA---CGC---ACGCTT---GCGTGGTTCGTTCTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTKV---A--GAKT-SL------------LWK-LIAASVWMLVTGYIGE---A------F--NP--------AG-G------S---T---------THS------VLW-GFLSTLGYLYILYTA-----W--Y-GEVAKLADN--S-GDAAV-K-K-G-V-R-TL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929717 [unk-env1-c] PRGD_OTU210_7624f7d0c48071f794d83d77b2719a5e gb|KJ929717| PRGD_OTU210_7624f7d0c48071f794d83d77b2719a5e, putative proteorhodopsin gene, partial cds. PRGD_OTU210_7624f7d0c48071f794d83d77b2719a5e, putative proteorhodopsin gene, partial cds. KJ929717 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 06-mars-09 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ACACTTACTGTGCCATTGATGTGTGTTGAATTTTACTTATTAACGAAAGCAGCAGGTGCAAAACTTTCTCTAATGTGGAAGTTAATCGGCGCTTCTGTAGTTATGCTAGTCGCTGGTTACATTGGTGAAGCTTTCAATCCTAAAGGTGGAGACACTGCACACTCTGTGTTGTGGGGCGTTATTTCTACAGTAGGATACATTTACATCTTGTACACTGCATGGTTTGGTGAAGTTGCTAAATTGGCAGAAACTAGTAACAACGCAGTTGTGAAAAGAGGTGTAAGAACATTAGCATGGTTCGTACTTGTT TLTVPLMCVEFYLLTKAAGAKLSLMWKLIGASVVMLVAGYIGEAFNPKGGDTAHSVLWGVISTVGYIYILYTAWFGEVAKLAETSNNAVVKRGVRTLAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACTTACTGTGCCATTGATGTGTGTTGAATTTTACTTATTAACGAAAGCA---------GCA------GGTGCAAAACTT---TCTCTA------------------------------------ATGTGGAAG---TTAATCGGCGCTTCTGTAGTTATGCTAGTCGCTGGTTACATTGGTGAA---------GCT------------------TTC------AATCCT------------------------AAAGGT---GGA------------------GAC---------ACT---------------------------GCACACTCT------------------GTGTTGTGG---GGCGTTATTTCTACAGTAGGATACATTTACATCTTGTACACTGCA---------------TGG------TTT---GGTGAAGTTGCTAAATTGGCAGAAACT------AGT---AACAACGCAGTTGTG---AAA---AGA---GGT---GTA---AGA---ACATTA---GCATGGTTCGTACTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTKA---A--GAKL-SL------------MWK-LIGASVVMLVAGYIGE---A------F--NP--------KG-G------D---T---------AHS------VLW-GVISTVGYIYILYTA-----W--F-GEVAKLAET--S-NNAVV-K-R-G-V-R-TL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929734 [unk-env1-c] PRGD_OTU219_otuREP_272e2b39f19effdbbb20a883ab1dfedc gb|KJ929734| PRGD_OTU219_otuREP_272e2b39f19effdbbb20a883ab1dfedc, putative proteorhodopsin gene, partial cds. PRGD_OTU219_otuREP_272e2b39f19effdbbb20a883ab1dfedc, putative proteorhodopsin gene, partial cds. KJ929734 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), English Channel (48.7717, -3.9683), Atlantic Ocean-Gibraltar strait (36.0987, -5.1975), Indian Ocean (-35.05, 23.73; -14.48, 113.45) ACACTTACAGTTCCATTGATGTGTGTTGAGTTCTACTTGCTAACCAAGGTGGCAGGAGCGAAGAAGGGACTTCTTTGGAAGTTAATCATTGCTTCAGTTTGGATGCTTGTTTTTGGTTACATCGGAGAGGCGTACAACCCAGCTTACGAGGGTGGAACGCTTGACGAGGCAACAACACACTCAGTGATGTACGGTGTTCTTTCTACACTCGGATATATTTATATTTTGTATGCTGCTTGGTTCGGAGAAGTTGCTACCCTTGCAGAGAATTCGAACAATGCGAACATCAAGAAAAGCGTTCGTATTCTTGCGTGGTTCGTCTTAGTA TLTVPLMCVEFYLLTKVAGAKKGLLWKLIIASVWMLVFGYIGEAYNPAYEGGTLDEATTHSVMYGVLSTLGYIYILYAAWFGEVATLAENSNNANIKKSVRILAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACTTACAGTTCCATTGATGTGTGTTGAGTTCTACTTGCTAACCAAGGTG---------GCA------GGAGCGAAGAAG---GGACTT------------------------------------CTTTGGAAG---TTAATCATTGCTTCAGTTTGGATGCTTGTTTTTGGTTACATCGGAGAG---------GCG------------------TAC------AACCCA------------------GCTTACGAGGGT---GGA---ACGCTTGAC---GAGGCA---------ACA---------------------------ACACACTCA------------------GTGATGTAC---GGTGTTCTTTCTACACTCGGATATATTTATATTTTGTATGCTGCT---------------TGG------TTC---GGAGAAGTTGCTACCCTTGCAGAGAAT------TCG---AACAATGCGAACATC---AAG---AAA---AGC---GTT---CGT---ATTCTT---GCGTGGTTCGTCTTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTKV---A--GAKK-GL------------LWK-LIIASVWMLVFGYIGE---A------Y--NP------AYEG-G-TLD-EA---T---------THS------VMY-GVLSTLGYIYILYAA-----W--F-GEVATLAEN--S-NNANI-K-K-S-V-R-IL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929735 [unk-env1-c] PRGD_OTU219_3236cd9c149d68d951320125c06a06df gb|KJ929735| PRGD_OTU219_3236cd9c149d68d951320125c06a06df, putative proteorhodopsin gene, partial cds. PRGD_OTU219_3236cd9c149d68d951320125c06a06df, putative proteorhodopsin gene, partial cds. KJ929735 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 20-juil-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ACACTTACAGTTCCATTGATGTGTGTTGAGTTCTACTTGCTAACCAAGGTGGCAGGAGCGAAGAAGGGACTTCTTTGGAAGTTAATCATTGCTTCAGTTTGGATGCTTGTTTTTGGTTACATCGGAGAGGCGTACAACCCAGCTAACGAGGGTGGAACGATTGACGAGGCAACAACACACTCAGTGATGTACGGTGTTCTTTCTACACTCGGATATATTTATATTTTGTATGCTGCTTGGTTCGGAGAAGTTGCTACCCTTGCAGAGAATTCGAACAATGCGAACATCAAGAAAAGCGTTCGTATTCTTGCGTGGTTCGTCTTAGTA TLTVPLMCVEFYLLTKVAGAKKGLLWKLIIASVWMLVFGYIGEAYNPANEGGTIDEATTHSVMYGVLSTLGYIYILYAAWFGEVATLAENSNNANIKKSVRILAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACTTACAGTTCCATTGATGTGTGTTGAGTTCTACTTGCTAACCAAGGTG---------GCA------GGAGCGAAGAAG---GGACTT------------------------------------CTTTGGAAG---TTAATCATTGCTTCAGTTTGGATGCTTGTTTTTGGTTACATCGGAGAG---------GCG------------------TAC------AACCCA------------------GCTAACGAGGGT---GGA---ACGATTGAC---GAGGCA---------ACA---------------------------ACACACTCA------------------GTGATGTAC---GGTGTTCTTTCTACACTCGGATATATTTATATTTTGTATGCTGCT---------------TGG------TTC---GGAGAAGTTGCTACCCTTGCAGAGAAT------TCG---AACAATGCGAACATC---AAG---AAA---AGC---GTT---CGT---ATTCTT---GCGTGGTTCGTCTTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTKV---A--GAKK-GL------------LWK-LIIASVWMLVFGYIGE---A------Y--NP------ANEG-G-TID-EA---T---------THS------VMY-GVLSTLGYIYILYAA-----W--F-GEVATLAEN--S-NNANI-K-K-S-V-R-IL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929920 [unk-env1-c] PRGD_OTU371_otuREP_8268cab04b1d1b041b6d706e38da2f93 gb|KJ929920| PRGD_OTU371_otuREP_8268cab04b1d1b041b6d706e38da2f93, putative proteorhodopsin gene, partial cds. PRGD_OTU371_otuREP_8268cab04b1d1b041b6d706e38da2f93, putative proteorhodopsin gene, partial cds. KJ929920 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 28-AUG-2009 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in English Channel (48.7717, -3.9683), Indian Ocean (-33.28, 45.35) ACTTTAACGGTCCCATTGATGTGTGTTGAGTTTTACCTATTAACTAAAGCAGCCGGTGCAAAGCAAAGCCTAATGTGGAAGTTAATTTTCGCTTCAGTTGTAATGCTTGTATTTGGCTACATCGGTGAAGCTTTCAACCCAGAAGGCGGAAGTACTTCTCACTCTGTAATGTATGGTGTGCTTTCTACCGTTGGTTACATTTACATTCTCTATACTGCGTGGATAGGGGAAGTTGCACAATTGGCAAAAGCTAGCGATAACGCTGCAATCCAGCGAAGCGTTAAAATCTTAGCTTGGTTCGTGCTTGTA TLTVPLMCVEFYLLTKAAGAKQSLMWKLIFASVVMLVFGYIGEAFNPEGGSTSHSVMYGVLSTVGYIYILYTAWIGEVAQLAKASDNAAIQRSVKILAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTTAACGGTCCCATTGATGTGTGTTGAGTTTTACCTATTAACTAAAGCA---------GCC------GGTGCAAAGCAA---AGCCTA------------------------------------ATGTGGAAG---TTAATTTTCGCTTCAGTTGTAATGCTTGTATTTGGCTACATCGGTGAA---------GCT------------------TTC------AACCCA------------------------GAAGGC---GGA------------------AGT---------ACT---------------------------TCTCACTCT------------------GTAATGTAT---GGTGTGCTTTCTACCGTTGGTTACATTTACATTCTCTATACTGCG---------------TGG------ATA---GGGGAAGTTGCACAATTGGCAAAAGCT------AGC---GATAACGCTGCAATC---CAG---CGA---AGC---GTT---AAA---ATCTTA---GCTTGGTTCGTGCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTKA---A--GAKQ-SL------------MWK-LIFASVVMLVFGYIGE---A------F--NP--------EG-G------S---T---------SHS------VMY-GVLSTVGYIYILYTA-----W--I-GEVAQLAKA--S-DNAAI-Q-R-S-V-K-IL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929804 [unk-env1-c] PRGD_OTU255_otuREP_1245106c82c22d3da9c3a79f86952406 gb|KJ929804| PRGD_OTU255_otuREP_1245106c82c22d3da9c3a79f86952406, putative proteorhodopsin gene, partial cds. PRGD_OTU255_otuREP_1245106c82c22d3da9c3a79f86952406, putative proteorhodopsin gene, partial cds. KJ929804 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -11.7527 -134.0937 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na ACATTAACGGTTCCATTGATGTGTGTTGAGTTTTATTTACTTACTAAAGCAGCTGGTGCTAAGAAAGGTCTCCTGTGGAAGCTTATTCTTGCGTCTGTTTGGATGCTTGTTGCTGGTCTAATAGGTGAGGCAGGAAATCCAGAAGGTGGTGATACAACGCACTCTGTAACATGGGGTGTGATTTCTACCATCGGCTACATTTACATTTTATACTCAGCTTGGTTTGGTGAAGTAGCTCAACTCGCTAACGCATCAAATAACGAGACAGTAAAGCGAGGTGTGAGAACATTGGCGTGGTTCGTTCTTGTA TLTVPLMCVEFYLLTKAAGAKKGLLWKLILASVWMLVAGLIGEAGNPEGGDTTHSVTWGVISTIGYIYILYSAWFGEVAQLANASNNETVKRGVRTLAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATTAACGGTTCCATTGATGTGTGTTGAGTTTTATTTACTTACTAAAGCA---------GCT------GGTGCTAAGAAA---GGTCTC------------------------------------CTGTGGAAG---CTTATTCTTGCGTCTGTTTGGATGCTTGTTGCTGGTCTAATAGGTGAG---------GCA------------------GGA------AATCCA------------------------GAAGGT---GGT------------------GAT---------ACA---------------------------ACGCACTCT------------------GTAACATGG---GGTGTGATTTCTACCATCGGCTACATTTACATTTTATACTCAGCT---------------TGG------TTT---GGTGAAGTAGCTCAACTCGCTAACGCA------TCA---AATAACGAGACAGTA---AAG---CGA---GGT---GTG---AGA---ACATTG---GCGTGGTTCGTTCTTGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTKA---A--GAKK-GL------------LWK-LILASVWMLVAGLIGE---A------G--NP--------EG-G------D---T---------THS------VTW-GVISTIGYIYILYSA-----W--F-GEVAQLANA--S-NNETV-K-R-G-V-R-TL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-c]_KJ929893 [unk-env1-c] PRGD_OTU344_otuREP_1c8fcb7256f41f5f81d28b3966265183 gb|KJ929893| PRGD_OTU344_otuREP_1c8fcb7256f41f5f81d28b3966265183, putative proteorhodopsin gene, partial cds. PRGD_OTU344_otuREP_1c8fcb7256f41f5f81d28b3966265183, putative proteorhodopsin gene, partial cds. KJ929893 [[root proteorhodopsin/env cluster 1/C subcluster]] root proteorhodopsin env cluster 1 C subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 24-mars-10 #na English Channel marine 48.7717 -3.9683 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683) ACGTTAACCGTGCCTTTAATGTGTGTGGAGTTTTACCTGCTCACCAGAATTGCCGGTGCGAAGCTAAGCCTGTTATGGAAACTGATAGGCGCCAGCGTCTGGATGCTCGTGGCTGGCTACATCGGTGAAGCCTTTACAGATGGCTCCTTATTCCACTCCACCTTTTGGGGTATAGTTTCTACCCTCGGTTATGTTTATGTGCTTTACACCGCTTGGGGTGGCGAGGTTAGTAAATTGGCCAACAAAACCAAAAAGCCGGTTGTTATCAAAGGCATTCGCACCCTTGCTTGGTTTGTATTGGTT TLTVPLMCVEFYLLTRIAGAKLSLLWKLIGASVWMLVAGYIGEAFTDGSLFHSTFWGIVSTLGYVYVLYTAWGGEVSKLANKTKKPVVIKGIRTLAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGTTAACCGTGCCTTTAATGTGTGTGGAGTTTTACCTGCTCACCAGAATT---------GCC------GGTGCGAAGCTA---AGCCTG------------------------------------TTATGGAAA---CTGATAGGCGCCAGCGTCTGGATGCTCGTGGCTGGCTACATCGGTGAA---------GCC------------------TTT------ACAGAT---------------------------------GGC------------------TCC---------TTA---------------------------TTCCACTCC------------------ACCTTTTGG---GGTATAGTTTCTACCCTCGGTTATGTTTATGTGCTTTACACCGCT---------------TGG------GGT---GGCGAGGTTAGTAAATTGGCCAACAAA------ACC---AAAAAGCCGGTTGTT---ATC---AAA---GGC---ATT---CGC---ACCCTT---GCTTGGTTTGTATTGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLLTRI---A--GAKL-SL------------LWK-LIGASVWMLVAGYIGE---A------F--TD-----------G------S---L---------FHS------TFW-GIVSTLGYVYVLYTA-----W--G-GEVSKLANK--T-KKPVV-I-K-G-I-R-TL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-b]_KJ929810 [unk-env1-b] PRGD_OTU261_otuREP_8d200fca557ea01df6744ed4c1aad809 gb|KJ929810| PRGD_OTU261_otuREP_8d200fca557ea01df6744ed4c1aad809, putative proteorhodopsin gene, partial cds. PRGD_OTU261_otuREP_8d200fca557ea01df6744ed4c1aad809, putative proteorhodopsin gene, partial cds. KJ929810 [[root proteorhodopsin/env cluster 1/B subcluster]] root proteorhodopsin env cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (69.5142, -133.4185), English Channel (48.7717, -3.9683) ACCCTAACGGTTCCTTTGATGTGCGTTGAATTCTACTTAATCACCAAAAAAGCCGGTGGAACCAGCGGCTTACTATGGCGTTTGATCACTGCTTCAGTAGCTATGCTTCTGTTGGGATACATCGGAGAGGCTTTCCACGCTGACGAGGCGGAGTCTTGGATCTGGGGTGCACTTTCAGGTTTGGCTTACTTCTACATCGTTTGGATGGTATGGAAGGGCGAGGTTGCTACCTTGGCTGCTAACGCTGGCGGAAAAGTTCAGAGCGCCGTTAAGGCACTCGGCTGGTTCGTACTAGTA TLTVPLMCVEFYLITKKAGGTSGLLWRLITASVAMLLLGYIGEAFHADEAESWIWGALSGLAYFYIVWMVWKGEVATLAANAGGKVQSAVKALGWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCCTAACGGTTCCTTTGATGTGCGTTGAATTCTACTTAATCACCAAAAAA---------GCC------GGTGGAACCAGC---GGCTTA------------------------------------CTATGGCGT---TTGATCACTGCTTCAGTAGCTATGCTTCTGTTGGGATACATCGGAGAG---------GCT------------------TTC------CACGCT------------------------------------------------------GAC---------GAG---------------------------GCGGAGTCT------------------TGGATCTGG---GGTGCACTTTCAGGTTTGGCTTACTTCTACATCGTTTGGATGGTA---------------TGG------AAG---GGCGAGGTTGCTACCTTGGCTGCTAAC------GCT---GGCGGAAAA---GTT---CAG---AGC---GCC---GTT---AAG---GCACTC---GGCTGGTTCGTACTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLITKK---A--GGTS-GL------------LWR-LITASVAMLLLGYIGE---A------F--HA------------------D---E---------AES------WIW-GALSGLAYFYIVWMV-----W--K-GEVATLAAN--A-GGK-V-Q-S-A-V-K-AL-GWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-b]_KJ929909 [unk-env1-b] PRGD_OTU360_otuREP_0ac4f02e714d8c2ec5ccaec5261a8dd7 gb|KJ929909| PRGD_OTU360_otuREP_0ac4f02e714d8c2ec5ccaec5261a8dd7, putative proteorhodopsin gene, partial cds. PRGD_OTU360_otuREP_0ac4f02e714d8c2ec5ccaec5261a8dd7, putative proteorhodopsin gene, partial cds. KJ929909 [[root proteorhodopsin/env cluster 1/B subcluster]] root proteorhodopsin env cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; 72.0542, -130.8781; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419) ACCTTGACGGTGCCCTTGATGTGTGTCGAATTTTACCTCATCACGAAAAAAGCGGGCGGAACGATATCCTTGCTCTGGAAACTCATTCTTGCTTCAGTTGCGATGTTGATGCTAGGCTATATTGGTGAAGCGTTTTATGCCAATGAGACCCAATCCTGGGTTTGGGGGGCCCTGTCTGGTGCTGCATACTTCTACATCGTTTGGATGGTTTGGAAGGGCGAAGTGGCAGAACTTGCCGCAAATGCAGGTGGAAACGTTCAAAAGGCCGTGAATGCCTTAATGAAGTTTGTTGTGATT TLTVPLMCVEFYLITKKAGGTISLLWKLILASVAMLMLGYIGEAFYANETQSWVWGALSGAAYFYIVWMVWKGEVAELAANAGGNVQKAVNALMKFVVI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCTTGACGGTGCCCTTGATGTGTGTCGAATTTTACCTCATCACGAAAAAA---------GCG------GGCGGAACGATA---TCCTTG------------------------------------CTCTGGAAA---CTCATTCTTGCTTCAGTTGCGATGTTGATGCTAGGCTATATTGGTGAA---------GCG------------------TTT------TATGCC------------------------------------------------------AAT---------GAG---------------------------ACCCAATCC------------------TGGGTTTGG---GGGGCCCTGTCTGGTGCTGCATACTTCTACATCGTTTGGATGGTT---------------TGG------AAG---GGCGAAGTGGCAGAACTTGCCGCAAAT------GCA---GGTGGAAAC---GTT---CAA---AAG---GCC---GTG---AAT---GCCTTA---ATGAAGTTTGTTGTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLTVPLMCVEFYLITKK---A--GGTI-SL------------LWK-LILASVAMLMLGYIGE---A------F--YA------------------N---E---------TQS------WVW-GALSGAAYFYIVWMV-----W--K-GEVAELAAN--A-GGN-V-Q-K-A-V-N-AL-MKFVVI-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-b]_KJ929883 [unk-env1-b] PRGD_OTU334_otuREP_70231b75be9daec8dd4b046c76cc4967 gb|KJ929883| PRGD_OTU334_otuREP_70231b75be9daec8dd4b046c76cc4967, putative proteorhodopsin gene, partial cds. PRGD_OTU334_otuREP_70231b75be9daec8dd4b046c76cc4967, putative proteorhodopsin gene, partial cds. KJ929883 [[root proteorhodopsin/env cluster 1/B subcluster]] root proteorhodopsin env cluster 1 B subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2004 #na South Pacific Ocean marine -33.9602 -73.3769 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-30.0264, -98.3884; -33.9602, -73.3769) GTGCTTACCGTACCACTGATGTGTGTAGAATTCTACCTGATTACACGTAAAGCAGGTGCTACCACAGGCTTGTTATGGCGCCTTATTGCGGCCTCTATGGTGATGCTGGTAACTGGATTCCTCGGTGAGAGTACCTATGTGTACAACACTGCAGAAACGGCCACAATGAGCTGGTTTATGGGCTTAGTATCTGGTTTGGCTTACTTCTACATTCTCTACCTGGCCATGTTTGGCGAAGTAAAGGAATTGGGGCAGAATGCTGGTCCAAAAGTTGCTAAGGCCGTTAAAACGCTGGCTTGGTTTGTACTGGTT VLTVPLMCVEFYLITRKAGATTGLLWRLIAASMVMLVTGFLGESTYVYNTAETATMSWFMGLVSGLAYFYILYLAMFGEVKELGQNAGPKVAKAVKTLAWFVLV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGCTTACCGTACCACTGATGTGTGTAGAATTCTACCTGATTACACGTAAA---------GCA------GGTGCTACCACA---GGCTTG------------------------------------TTATGGCGC---CTTATTGCGGCCTCTATGGTGATGCTGGTAACTGGATTCCTCGGTGAG---------AGT------------------ACC------TATGTG---------------------------------TAC---AACACTGCA---GAAACG---------GCC---------------------------ACAATGAGC------------------TGGTTTATG---GGCTTAGTATCTGGTTTGGCTTACTTCTACATTCTCTACCTGGCC---------------ATG------TTT---GGCGAAGTAAAGGAATTGGGGCAGAAT------GCT---GGTCCAAAA---GTT---GCT---AAG---GCC---GTT---AAA---ACGCTG---GCTTGGTTTGTACTGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLTVPLMCVEFYLITRK---A--GATT-GL------------LWR-LIAASMVMLVTGFLGE---S------T--YV-----------Y-NTA-ET---A---------TMS------WFM-GLVSGLAYFYILYLA-----M--F-GEVKELGQN--A-GPK-V-A-K-A-V-K-TL-AWFVLV-------------------------------------------------------------------------------------------------------------------------------- [unk-env1-Verrumicrobia]_KJ929862 [unk-env1-Verrumicrobia] PRGD_OTU313_otuREP_df462d1d010e7d32144e26c0cfcf1124 gb|KJ929862| PRGD_OTU313_otuREP_df462d1d010e7d32144e26c0cfcf1124, putative proteorhodopsin gene, partial cds. PRGD_OTU313_otuREP_df462d1d010e7d32144e26c0cfcf1124, putative proteorhodopsin gene, partial cds. KJ929862 [[root proteorhodopsin/env cluster 1/unclassified Verrumicrobia subcluster]] root proteorhodopsin env cluster 1 unclassified Verrumicrobia subcluster proteorhodopsin proton pump na ; E108 light-energy conversion (ion transport) Blue-Green (M105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2009 #na Arctic Ocean-Mackenzie estuary marine 69.5142 -133.4185 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185) CTCCTCACCGTGCCTCTTATGTGCGTGGAGTTCTATCTCCTTCTCAAAGCGGCTGGGGCCAGCATCAATATGCTCTGGCGCCTCATCGCTTATTCCGTCCTCATGTTGGTCGCAGGATACGTCGGCGAAGTCTCTGCCAAGCTCGGTCAACCCGTGCGTGGCTTTGAGAATTTCGGCTGGGGTGTCATCTCCACCATCGGTTGGGCAGGAATCGTTTATGAGATCTTCTTCGGGGAAGCCAAACAACTTGCCGACGGCAGCAGCGATGCCAACGTCCGCAAGGCGTTCAACCTCCTCCGTGGTTTCGTTCTCATC LLTVPLMCVEFYLLLKAAGASINMLWRLIAYSVLMLVAGYVGEVSAKLGQPVRGFENFGWGVISTIGWAGIVYEIFFGEAKQLADGSSDANVRKAFNLLRGFVLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCTCACCGTGCCTCTTATGTGCGTGGAGTTCTATCTCCTTCTCAAAGCG---------GCT------GGGGCCAGCATC---AATATG------------------------------------CTCTGGCGC---CTCATCGCTTATTCCGTCCTCATGTTGGTCGCAGGATACGTCGGCGAA---------GTC------------------TCT------GCCAAG---------------------------------CTC---GGTCAACCC---GTGCGT---------GGC---------------------------TTTGAGAAT------------------TTCGGCTGG---GGTGTCATCTCCACCATCGGTTGGGCAGGAATCGTTTATGAGATC---------------TTC------TTC---GGGGAAGCCAAACAACTTGCCGACGGC------AGC---AGCGATGCCAACGTC---CGC---AAG---GCG---TTC---AAC---CTCCTC---CGTGGTTTCGTTCTCATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLMCVEFYLLLKA---A--GASI-NM------------LWR-LIAYSVLMLVAGYVGE---V------S--AK-----------L-GQP-VR---G---------FEN------FGW-GVISTIGWAGIVYEI-----F--F-GEAKQLADG--S-SDANV-R-K-A-F-N-LL-RGFVLI-------------------------------------------------------------------------------------------------------------------------------- [Octadecabacter-rhodopsin]_KJ929864 [Octadecabacter-rhodopsin] PRGD_OTU315_otuREP_cdaea19e3d6871756dc2d06ef8576587 gb|KJ929864| PRGD_OTU315_otuREP_cdaea19e3d6871756dc2d06ef8576587, putative proteorhodopsin gene, partial cds. PRGD_OTU315_otuREP_cdaea19e3d6871756dc2d06ef8576587, putative proteorhodopsin gene, partial cds. KJ929864 [[other rhodopsin/Octadecabacter cluster]] other rhodopsin Octadecabacter cluster Octadecabacter rhodopsin proton pump na ; E108 light-energy conversion (ion transport) Green (L105) [unclassified sequences/environmental samples] taxon:358574 genomic DNA other 19-sept-13 2002 #na Arctic Ocean-Atlantic side marine 73.9992 19.2097 Diversity of proteorhodopsin-containing bacteria in marine environments as revealed by Illumina amplicon sequencing Boeuf,D.,Audic,S.,Mahe,F.,Jeanthon,C. Unpublished #na sequence detected in South Pacific Ocean (-33.9602, -73.3769), Arctic Ocean-Atlantic side (71.501, 19.8025; 73.9992, 19.2097; 76.3333, 14.8833), Arctic Ocean-Pacific side (70.9139, -128.9264; ; 69.5142, -133.4185; 67.49, -168.12), English Channel (48.7717, -3.9683), Indian Ocean (-23.5956, 69.0419; -35.05, 23.73; -14.48, 113.45) CTTTTGACTGTGCCTTTACTTTTGATAGAGTTAATCTTGGTCATGAGCCTGAGCAGATCTGAAACGGTGTCGCGCGCAACCAGCCTTGGTCTTGCAGCATTGTTAATGGTTGCTTTGGGTTACCCAGGTGAAATTTCCGCATCGAGCGGTACACGCTGGATCTTTGGATTGTTGTCATTGATTCCATTCTTATGGATTGTTTTCCAACTATATTCC LLTVPLLLIELILVMSLSRSETVSRATSLGLAALLMVALGYPGEISASSGTRWIFGLLSLIPFLWIVFQLYS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTGACTGTGCCTTTACTTTTGATAGAGTTAATCTTGGTCATGAGCCTG---------AGC---AGATCTGAAACGGTG---TCGCGC------------------------------------GCAACCAGC---CTTGGTCTTGCAGCATTGTTAATGGTTGCTTTGGGTTACCCAGGTGAA---------ATT------------------------------------------------------------------------------TCC---GCATCG---------AGC---------------------------GGTACACGC------------------TGGATCTTT---GGATTGTTGTCATTGATTCCATTCTTATGGATTGTTTTCCAACTA---------------TAT------TCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTVPLLLIELILVMSL---S-RSETV-SR------------ATS-LGLAALLMVALGYPGE---I--------------------------S-AS---S---------GTR------WIF-GLLSLIPFLWIVFQL-----Y--S-----------------------------------------------------------------------------------------------------------------------------------------------------------------------